Prediction of potential genes in microbial genomes Time: Sat Jul 16 23:22:48 2011 Seq name: gi|257257262|gb|ACDX02000001.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont0.1, whole genome shotgun sequence Length of sequence - 264414 bp Number of predicted genes - 246, with homology - 244 Number of transcription units - 150, operones - 61 average op.length - 2.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 110 - 460 389 ## NLA_8450 transposase - Prom 549 - 608 2.8 + Prom 492 - 551 5.8 2 2 Tu 1 . + CDS 684 - 1787 1499 ## COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 3 3 Op 1 . + CDS 1894 - 3567 2489 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II + Term 3576 - 3624 8.6 4 3 Op 2 . + CDS 3637 - 4617 1659 ## COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase + Term 4635 - 4684 14.6 - Term 4621 - 4672 14.2 5 4 Op 1 18/0.000 - CDS 4784 - 6940 3057 ## COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases 6 4 Op 2 25/0.000 - CDS 7051 - 7257 447 ## COG1758 DNA-directed RNA polymerase, subunit K/omega 7 4 Op 3 . - CDS 7317 - 7973 659 ## COG0194 Guanylate kinase - Prom 8161 - 8220 5.0 + Prom 7998 - 8057 4.4 8 5 Op 1 . + CDS 8087 - 8647 859 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins + Term 8667 - 8715 11.4 + Prom 8728 - 8787 4.1 9 5 Op 2 . + CDS 8818 - 10665 2575 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) + Term 10716 - 10766 19.4 - TRNA 10928 - 11020 67.0 # Ser GCT 0 0 + Prom 11105 - 11164 8.7 10 6 Tu 1 . + CDS 11186 - 11746 247 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases + Term 11801 - 11851 13.6 - Term 11789 - 11839 13.6 11 7 Tu 1 . - CDS 11854 - 12660 1218 ## COG5266 ABC-type Co2+ transport system, periplasmic component - Prom 12695 - 12754 8.1 - Term 12907 - 12936 2.1 12 8 Op 1 9/0.054 - CDS 12951 - 14078 1485 ## COG3317 Uncharacterized lipoprotein 13 8 Op 2 . - CDS 14151 - 15032 1338 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase - Prom 15163 - 15222 4.9 + Prom 15277 - 15336 6.9 14 9 Op 1 5/0.054 + CDS 15379 - 16089 832 ## COG1296 Predicted branched-chain amino acid permease (azaleucine resistance) 15 9 Op 2 . + CDS 16086 - 16394 366 ## COG4541 Predicted membrane protein + Term 16429 - 16480 9.1 + Prom 16403 - 16462 7.4 16 10 Tu 1 . + CDS 16486 - 17235 454 ## PROTEIN SUPPORTED gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 + Term 17254 - 17312 16.8 - Term 17513 - 17562 13.8 17 11 Tu 1 . - CDS 17585 - 18538 1244 ## COG0039 Malate/lactate dehydrogenases - Prom 18712 - 18771 6.1 + Prom 18701 - 18760 7.0 18 12 Tu 1 . + CDS 18851 - 19672 994 ## D11S_2007 lipoprotein + Term 19702 - 19758 19.1 - Term 19690 - 19745 16.0 19 13 Op 1 2/0.216 - CDS 19926 - 20777 1161 ## COG3782 Uncharacterized protein conserved in bacteria 20 13 Op 2 . - CDS 20847 - 21662 1170 ## COG0565 rRNA methylase - Prom 21812 - 21871 3.6 + Prom 21646 - 21705 8.2 21 14 Tu 1 . + CDS 21846 - 22631 862 ## COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family + Term 22634 - 22675 6.3 22 15 Op 1 3/0.108 + CDS 22991 - 24130 1208 ## COG1538 Outer membrane protein 23 15 Op 2 13/0.000 + CDS 24170 - 26353 194 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P + Term 26368 - 26415 3.1 24 15 Op 3 . + CDS 26444 - 27670 1690 ## COG0845 Membrane-fusion protein + Term 27704 - 27752 11.4 + Prom 27847 - 27906 4.8 25 16 Tu 1 . + CDS 27929 - 29239 1898 ## COG2895 GTPases - Sulfate adenylate transferase subunit 1 + Term 29471 - 29513 -0.8 - Term 29538 - 29597 14.4 26 17 Tu 1 . - CDS 29774 - 31744 2009 ## COG2931 RTX toxins and related Ca2+-binding proteins - Prom 31775 - 31834 5.7 - Term 31948 - 32005 13.9 27 18 Tu 1 . - CDS 32032 - 33291 1963 ## COG0014 Gamma-glutamyl phosphate reductase - Prom 33317 - 33376 4.6 28 19 Op 1 . - CDS 33784 - 34809 1457 ## COG0859 ADP-heptose:LPS heptosyltransferase - Prom 34832 - 34891 4.2 - Term 34844 - 34886 11.2 29 19 Op 2 . - CDS 34905 - 35570 608 ## PSHAa1600 cold shock DNA-binding domain-containing protein - Prom 35661 - 35720 8.8 30 20 Tu 1 . - CDS 35822 - 37438 2031 ## COG0665 Glycine/D-amino acid oxidases (deaminating) - Prom 37491 - 37550 3.3 - Term 37593 - 37642 6.1 31 21 Op 1 2/0.216 - CDS 37651 - 38547 1561 ## COG0061 Predicted sugar kinase 32 21 Op 2 2/0.216 - CDS 38563 - 39135 933 ## COG3165 Uncharacterized protein conserved in bacteria 33 22 Op 1 . - CDS 39246 - 40040 870 ## COG0451 Nucleoside-diphosphate-sugar epimerases 34 22 Op 2 . - CDS 40053 - 41192 1047 ## gi|261363648|ref|ZP_05976531.1| conserved hypothetical protein - Prom 41215 - 41274 4.3 35 23 Tu 1 . - CDS 41541 - 42290 955 ## COG0491 Zn-dependent hydrolases, including glyoxylases - Prom 42323 - 42382 3.4 - Term 42370 - 42412 4.6 36 24 Tu 1 . - CDS 42424 - 43416 1023 ## COG3547 Transposase and inactivated derivatives - Prom 43657 - 43716 6.0 + Prom 43488 - 43547 3.2 37 25 Tu 1 . + CDS 43613 - 43807 170 ## azo1321 hypothetical protein + Prom 44621 - 44680 4.2 38 26 Op 1 . + CDS 44700 - 45137 450 ## Neut_1890 hypothetical protein 39 26 Op 2 . + CDS 45229 - 46281 1261 ## COG4174 ABC-type uncharacterized transport system, permease component 40 26 Op 3 . + CDS 46317 - 46493 135 ## gi|288575220|ref|ZP_05976537.2| conserved hypothetical protein 41 26 Op 4 . + CDS 46537 - 47559 1026 ## COG4239 ABC-type uncharacterized transport system, permease component + Term 47594 - 47619 -0.1 + Prom 47583 - 47642 5.7 42 27 Tu 1 . + CDS 47667 - 49208 1857 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II + Term 49252 - 49298 2.3 + Prom 49254 - 49313 2.4 43 28 Op 1 . + CDS 49400 - 50947 299 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Prom 50965 - 51024 4.1 44 28 Op 2 . + CDS 51098 - 51430 537 ## COG0526 Thiol-disulfide isomerase and thioredoxins + Term 51441 - 51491 15.6 + Prom 51434 - 51493 7.4 45 29 Op 1 . + CDS 51521 - 53539 3157 ## COG0556 Helicase subunit of the DNA excision repair complex 46 29 Op 2 . + CDS 53618 - 53860 130 ## gi|288575221|ref|ZP_06393568.1| conserved hypothetical protein 47 29 Op 3 . + CDS 53850 - 54524 238 ## gi|288575222|ref|ZP_06393569.1| hypothetical protein NEIMUCOT_03562 48 29 Op 4 . + CDS 54530 - 55024 106 ## gi|261363662|ref|ZP_05976545.1| hypothetical protein NEIMUCOT_03563 + Term 55066 - 55099 0.5 - Term 55099 - 55158 14.2 49 30 Tu 1 . - CDS 55185 - 56504 1587 ## COG0477 Permeases of the major facilitator superfamily - Prom 56525 - 56584 4.2 - Term 56650 - 56686 -0.0 50 31 Tu 1 . - CDS 56845 - 57690 243 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 51 32 Tu 1 . - CDS 57828 - 58373 655 ## ESA_02188 hypothetical protein - Prom 58596 - 58655 5.6 - Term 58648 - 58689 7.0 52 33 Op 1 . - CDS 58748 - 59203 468 ## COG4097 Predicted ferric reductase 53 33 Op 2 . - CDS 59223 - 59822 618 ## COG4097 Predicted ferric reductase - Prom 59870 - 59929 2.6 54 34 Op 1 . + CDS 59865 - 60284 356 ## Aasi_1471 hypothetical protein 55 34 Op 2 . + CDS 60339 - 60659 431 ## COG3293 Transposase and inactivated derivatives 56 34 Op 3 . + CDS 60646 - 61458 275 ## gi|261363669|ref|ZP_05976552.1| conserved hypothetical protein + Term 61517 - 61561 -1.0 - Term 61875 - 61922 15.3 57 35 Op 1 . - CDS 61942 - 65271 3738 ## COG5373 Predicted membrane protein - Prom 65299 - 65358 4.3 - Term 65388 - 65435 7.1 58 35 Op 2 . - CDS 65441 - 66898 1141 ## COG0168 Trk-type K+ transport systems, membrane components - Prom 67002 - 67061 5.4 + Prom 67070 - 67129 5.5 59 36 Tu 1 . + CDS 67150 - 68784 2382 ## COG0504 CTP synthase (UTP-ammonia lyase) + Term 68812 - 68855 5.1 60 37 Tu 1 . + CDS 69229 - 70350 1536 ## COG3203 Outer membrane protein (porin) + Term 70383 - 70430 14.1 - Term 70365 - 70423 15.3 61 38 Op 1 . - CDS 70443 - 71171 977 ## COG3471 Predicted periplasmic/secreted protein - Prom 71352 - 71411 7.1 - Term 71303 - 71341 -0.1 62 38 Op 2 . - CDS 71415 - 72827 1977 ## COG0569 K+ transport systems, NAD-binding component - Prom 72853 - 72912 3.8 - Term 72857 - 72912 14.1 63 39 Tu 1 . - CDS 72928 - 74379 2307 ## COG0471 Di- and tricarboxylate transporters - Prom 74612 - 74671 5.3 64 40 Op 1 . - CDS 74896 - 76149 1645 ## COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit 65 40 Op 2 . - CDS 76146 - 77774 2530 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 66 40 Op 3 . - CDS 77774 - 78412 803 ## NLA_6600 ferredoxin family protein - Prom 78448 - 78507 2.4 + Prom 79118 - 79177 2.2 67 41 Tu 1 . + CDS 79237 - 80760 1829 ## PROTEIN SUPPORTED gi|169634422|ref|YP_001708158.1| fumarate hydratase + Term 80783 - 80832 13.0 + Prom 80854 - 80913 4.7 68 42 Tu 1 . + CDS 80984 - 82186 1983 ## COG0133 Tryptophan synthase beta chain + Term 82216 - 82265 9.2 + Prom 82266 - 82325 3.7 69 43 Tu 1 . + CDS 82350 - 83018 248 ## COG0500 SAM-dependent methyltransferases + Prom 83074 - 83133 4.9 70 44 Tu 1 . + CDS 83265 - 84092 736 ## COG0266 Formamidopyrimidine-DNA glycosylase + Term 84104 - 84157 7.1 + Prom 84107 - 84166 2.9 71 45 Op 1 . + CDS 84194 - 84964 818 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase + Term 84973 - 85015 1.1 + Prom 85005 - 85064 5.8 72 45 Op 2 . + CDS 85153 - 85890 1158 ## COG0678 Peroxiredoxin + Term 85939 - 85997 11.3 + Prom 86002 - 86061 6.0 73 46 Tu 1 . + CDS 86144 - 87550 333 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 + Term 87578 - 87637 16.1 - Term 87570 - 87620 15.2 74 47 Tu 1 . - CDS 87635 - 88579 1365 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 88608 - 88667 5.1 + Prom 88570 - 88629 5.0 75 48 Tu 1 . + CDS 88708 - 89043 660 ## COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit + Term 89057 - 89104 10.1 + Prom 89084 - 89143 3.3 76 49 Op 1 2/0.216 + CDS 89170 - 89535 652 ## COG0607 Rhodanese-related sulfurtransferase + Term 89546 - 89583 8.0 77 49 Op 2 . + CDS 89590 - 90084 618 ## COG3439 Uncharacterized conserved protein + Term 90106 - 90154 13.1 - Term 90089 - 90144 14.2 78 50 Tu 1 1/0.297 - CDS 90333 - 90782 759 ## COG2137 Uncharacterized protein conserved in bacteria - Prom 90918 - 90977 5.7 - Term 90856 - 90898 -0.5 79 51 Tu 1 . - CDS 90981 - 91691 1331 ## COG0546 Predicted phosphatases + Prom 91907 - 91966 6.7 80 52 Tu 1 . + CDS 92086 - 93351 1879 ## COG0334 Glutamate dehydrogenase/leucine dehydrogenase + Term 93381 - 93419 9.5 - Term 93369 - 93407 9.5 81 53 Op 1 . - CDS 93433 - 94047 395 ## gi|261363695|ref|ZP_05976578.1| hypothetical protein NEIMUCOT_03608 82 53 Op 2 . - CDS 94073 - 94672 800 ## COG0424 Nucleotide-binding protein implicated in inhibition of septum formation - Prom 94707 - 94766 2.5 83 53 Op 3 . - CDS 94768 - 95247 793 ## COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily - Prom 95303 - 95362 3.0 + Prom 95468 - 95527 5.4 84 54 Tu 1 . + CDS 95700 - 96323 919 ## COG3230 Heme oxygenase + Prom 96442 - 96501 5.3 85 55 Tu 1 . + CDS 96536 - 98374 1833 ## NLA_6130 Ex13L + Term 98395 - 98432 6.2 - Term 98466 - 98508 -0.8 86 56 Tu 1 . - CDS 98591 - 99721 890 ## COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein - Prom 99798 - 99857 5.5 + Prom 99813 - 99872 7.9 87 57 Op 1 25/0.000 + CDS 99952 - 100218 447 ## COG1862 Preprotein translocase subunit YajC + Term 100232 - 100281 8.3 88 57 Op 2 31/0.000 + CDS 100294 - 102147 2035 ## COG0342 Preprotein translocase subunit SecD 89 57 Op 3 . + CDS 102151 - 103086 1289 ## COG0341 Preprotein translocase subunit SecF + Term 103105 - 103167 21.1 - Term 103341 - 103382 9.7 90 58 Tu 1 . - CDS 103412 - 103969 709 ## PT7_2258 hypothetical protein - Prom 104110 - 104169 5.7 + Prom 104041 - 104100 4.2 91 59 Tu 1 . + CDS 104271 - 105707 1388 ## COG1012 NAD-dependent aldehyde dehydrogenases + Term 105729 - 105785 7.1 - Term 105717 - 105773 10.9 92 60 Tu 1 . - CDS 105785 - 107104 1480 ## COG2733 Predicted membrane protein - Prom 107265 - 107324 8.4 93 61 Tu 1 . - CDS 107375 - 108055 681 ## COG2836 Uncharacterized conserved protein + Prom 108319 - 108378 8.6 94 62 Tu 1 . + CDS 108504 - 111608 3042 ## COG1629 Outer membrane receptor proteins, mostly Fe transport + Term 111700 - 111753 14.3 + Prom 111765 - 111824 5.2 95 63 Op 1 31/0.000 + CDS 111922 - 113694 1396 ## COG0358 DNA primase (bacterial type) 96 63 Op 2 . + CDS 113915 - 115864 3255 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) + Term 115869 - 115910 5.4 - Term 116197 - 116247 8.2 97 64 Op 1 . - CDS 116267 - 117016 922 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase - Term 117068 - 117117 7.1 98 64 Op 2 . - CDS 117121 - 117870 819 ## COG3176 Putative hemolysin - Prom 118099 - 118158 8.0 + Prom 118102 - 118161 10.9 99 65 Op 1 . + CDS 118184 - 119530 1165 ## COG5295 Autotransporter adhesin + Term 119555 - 119618 3.0 + Prom 119566 - 119625 2.4 100 65 Op 2 . + CDS 119669 - 120808 1356 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family + Term 120876 - 120920 14.1 + Prom 120908 - 120967 2.6 101 66 Op 1 2/0.216 + CDS 120987 - 121766 1004 ## COG0030 Dimethyladenosine transferase (rRNA methylation) 102 66 Op 2 . + CDS 121784 - 122512 606 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 103 67 Tu 1 . + CDS 122634 - 122993 546 ## NMC0646 hypothetical protein 104 68 Tu 1 . + CDS 123106 - 123432 197 ## NLA_15410 transcriptional regulator + Term 123436 - 123472 -0.3 105 69 Op 1 . + CDS 123567 - 124841 1452 ## COG0285 Folylpolyglutamate synthase 106 69 Op 2 . + CDS 124854 - 126074 1452 ## NLA_15430 tetrapac protein 107 69 Op 3 . + CDS 126067 - 126573 564 ## COG1286 Uncharacterized membrane protein, required for colicin V production + Term 126577 - 126638 12.7 - Term 126906 - 126937 3.4 108 70 Op 1 33/0.000 - CDS 126960 - 127325 593 ## PROTEIN SUPPORTED gi|161869521|ref|YP_001598688.1| 50S ribosomal protein L19 109 70 Op 2 30/0.000 - CDS 127339 - 128088 604 ## COG0336 tRNA-(guanine-N1)-methyltransferase 110 70 Op 3 12/0.000 - CDS 128088 - 128597 185 ## PROTEIN SUPPORTED gi|163796730|ref|ZP_02190688.1| 50S ribosomal protein L19 111 70 Op 4 2/0.216 - CDS 128616 - 128864 379 ## PROTEIN SUPPORTED gi|225373729|ref|ZP_03750950.1| hypothetical protein NEISUBOT_02020 112 70 Op 5 3/0.108 - CDS 128941 - 131334 2899 ## COG1042 Acyl-CoA synthetase (NDP forming) - Prom 131547 - 131606 6.9 - Term 131462 - 131504 -0.8 113 71 Op 1 40/0.000 - CDS 131700 - 133115 1815 ## COG0642 Signal transduction histidine kinase 114 71 Op 2 . - CDS 133131 - 133808 1018 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 134025 - 134084 3.9 + Prom 133915 - 133974 4.8 115 72 Tu 1 . + CDS 134178 - 135266 1251 ## COG0077 Prephenate dehydratase + Term 135285 - 135320 5.1 - Term 135272 - 135307 5.1 116 73 Op 1 . - CDS 135335 - 136078 1293 ## COG1636 Uncharacterized protein conserved in bacteria 117 73 Op 2 . - CDS 136154 - 137605 2123 ## MS2191 hypothetical protein - Prom 137629 - 137688 4.1 118 74 Tu 1 . - CDS 137769 - 138380 842 ## COG0344 Predicted membrane protein - Prom 138404 - 138463 5.9 + Prom 138349 - 138408 7.2 119 75 Op 1 . + CDS 138437 - 138787 567 ## COG1539 Dihydroneopterin aldolase 120 75 Op 2 . + CDS 138919 - 139452 962 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes + Term 139466 - 139519 10.3 - Term 139460 - 139501 3.5 121 76 Tu 1 . - CDS 139521 - 139943 765 ## COG3753 Uncharacterized protein conserved in bacteria - Prom 139969 - 140028 5.9 122 77 Tu 1 . - CDS 140138 - 141121 964 ## gi|288575265|ref|ZP_05976619.2| conserved hypothetical protein - Prom 141235 - 141294 4.0 + Prom 141195 - 141254 3.1 123 78 Tu 1 . + CDS 141276 - 142244 1184 ## APJL_1729 hypothetical protein + Term 142452 - 142501 -0.6 124 79 Op 1 8/0.054 - CDS 142338 - 142838 510 ## COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 125 79 Op 2 2/0.216 - CDS 142807 - 143355 649 ## COG1678 Putative transcriptional regulator 126 79 Op 3 . - CDS 143368 - 143919 414 ## COG3045 Uncharacterized protein conserved in bacteria - Prom 144085 - 144144 4.8 + Prom 144023 - 144082 5.6 127 80 Tu 1 . + CDS 144115 - 145872 2014 ## COG4942 Membrane-bound metallopeptidase + Term 145893 - 145944 3.4 + Prom 145946 - 146005 4.8 128 81 Op 1 . + CDS 146137 - 147639 2053 ## COG0793 Periplasmic protease + Term 147664 - 147711 11.8 129 81 Op 2 . + CDS 147735 - 149114 2084 ## COG1066 Predicted ATP-dependent serine protease + Term 149133 - 149178 5.5 + Prom 149273 - 149332 6.8 130 82 Op 1 . + CDS 149490 - 149936 694 ## COG0691 tmRNA-binding protein + Term 150055 - 150109 8.4 + Prom 150030 - 150089 2.1 131 82 Op 2 . + CDS 150115 - 150453 459 ## gi|261363745|ref|ZP_05976628.1| putative membrane protein + Term 150471 - 150525 15.2 132 83 Tu 1 . + CDS 150580 - 152145 2337 ## COG0519 GMP synthase, PP-ATPase domain/subunit + Term 152173 - 152209 7.5 + Prom 152304 - 152363 3.4 133 84 Tu 1 . + CDS 152486 - 154072 2406 ## COG1620 L-lactate permease + Term 154085 - 154133 13.6 + Prom 154103 - 154162 5.2 134 85 Op 1 25/0.000 + CDS 154203 - 154847 733 ## COG0118 Glutamine amidotransferase + Term 154882 - 154922 1.3 + Prom 154930 - 154989 6.1 135 85 Op 2 . + CDS 155009 - 155746 1020 ## COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase + Prom 155995 - 156054 4.1 136 86 Tu 1 . + CDS 156081 - 156398 499 ## gi|261363750|ref|ZP_05976633.1| putative cellulose synthase + Term 156436 - 156487 -1.0 + Prom 156412 - 156471 1.8 137 87 Op 1 24/0.000 + CDS 156543 - 157310 1180 ## COG0107 Imidazoleglycerol-phosphate synthase 138 87 Op 2 4/0.108 + CDS 157434 - 157832 537 ## COG0139 Phosphoribosyl-AMP cyclohydrolase 139 88 Tu 1 2/0.216 + CDS 157973 - 158296 488 ## COG0140 Phosphoribosyl-ATP pyrophosphohydrolase + Prom 158298 - 158357 3.9 140 89 Op 1 2/0.216 + CDS 158410 - 158733 451 ## COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 141 89 Op 2 16/0.000 + CDS 158779 - 158973 375 ## COG1826 Sec-independent protein secretion pathway components 142 89 Op 3 28/0.000 + CDS 158977 - 159651 877 ## COG1826 Sec-independent protein secretion pathway components 143 89 Op 4 . + CDS 159660 - 160436 1029 ## COG0805 Sec-independent protein secretion pathway component TatC + Term 160470 - 160507 8.0 + Prom 160482 - 160541 3.2 144 90 Tu 1 . + CDS 160594 - 160878 500 ## NMC1683 hypothetical protein + Term 160895 - 160938 7.4 + Prom 160977 - 161036 5.0 145 91 Tu 1 . + CDS 161100 - 163049 2541 ## CAP2UW1_2831 hypothetical protein + Term 163067 - 163117 11.1 146 92 Tu 1 . + CDS 163562 - 164215 632 ## COG1335 Amidases related to nicotinamidase + Term 164250 - 164282 4.7 + TRNA 164541 - 164616 81.9 # Met CAT 0 0 147 93 Tu 1 . + CDS 164880 - 166217 1197 ## COG0733 Na+-dependent transporters of the SNF family + Term 166232 - 166295 15.2 - Term 166227 - 166277 8.2 148 94 Op 1 . - CDS 166337 - 167452 1567 ## COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis 149 94 Op 2 . - CDS 167586 - 168662 1729 ## COG0216 Protein chain release factor A - Prom 168712 - 168771 3.6 - Term 168752 - 168790 4.1 150 95 Op 1 32/0.000 - CDS 168801 - 169487 1160 ## COG2011 ABC-type metal ion transport system, permease component 151 95 Op 2 . - CDS 169489 - 170226 389 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 - Prom 170376 - 170435 5.5 152 96 Tu 1 . - CDS 170454 - 170654 305 ## gi|261363766|ref|ZP_05976649.1| conserved hypothetical protein - Term 170671 - 170719 16.1 153 97 Tu 1 . - CDS 170729 - 172150 1913 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases - Prom 172273 - 172332 6.7 + Prom 172157 - 172216 5.4 154 98 Tu 1 . + CDS 172296 - 173030 771 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases + Term 173065 - 173102 6.0 155 99 Tu 1 . - CDS 173103 - 173552 281 ## Ndas_4801 polyketide cyclase/dehydrase - Prom 173755 - 173814 2.6 - Term 173763 - 173809 13.2 156 100 Tu 1 . - CDS 173827 - 175182 476 ## Arad_4108 hypothetical protein - Prom 175232 - 175291 4.4 - Term 175199 - 175236 8.0 157 101 Tu 1 . - CDS 175344 - 177815 3279 ## COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) - Prom 177885 - 177944 5.0 - Term 177896 - 177935 7.1 158 102 Op 1 . - CDS 177953 - 179209 1943 ## NMCC_0620 hypothetical protein - Prom 179340 - 179399 5.3 159 102 Op 2 . - CDS 179447 - 180019 473 ## COG3023 Negative regulator of beta-lactamase expression - Prom 180134 - 180193 6.4 + Prom 179970 - 180029 3.6 160 103 Tu 1 . + CDS 180149 - 181144 1173 ## COG1559 Predicted periplasmic solute-binding protein + Term 181171 - 181219 14.2 - Term 181151 - 181211 17.2 161 104 Tu 1 . - CDS 181225 - 182925 2270 ## COG0608 Single-stranded DNA-specific exonuclease - Prom 183016 - 183075 6.2 162 105 Op 1 . + CDS 183452 - 183814 272 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) + Term 183845 - 183872 -0.9 163 105 Op 2 . + CDS 183884 - 184234 296 ## gi|288575283|ref|ZP_05976660.2| conserved hypothetical protein 164 105 Op 3 . + CDS 184244 - 184645 156 ## gi|261363778|ref|ZP_05976661.1| putative TrwM protein 165 105 Op 4 . + CDS 184587 - 187004 1653 ## COG3451 Type IV secretory pathway, VirB4 components + Term 187010 - 187055 10.4 166 106 Op 1 . + CDS 187095 - 187757 596 ## TEQUI_0132 minor pilin of type IV secretion complex, VirB5 + Term 187777 - 187819 6.1 167 106 Op 2 . + CDS 187828 - 188802 573 ## COG3704 Type IV secretory pathway, VirB6 components 168 106 Op 3 . + CDS 188824 - 189264 291 ## gi|261363782|ref|ZP_05976665.1| putative inner-membrane translocator 169 106 Op 4 . + CDS 189276 - 189749 303 ## gi|261363783|ref|ZP_05976666.1| conserved hypothetical protein + Term 189772 - 189803 2.4 + Prom 189751 - 189810 4.6 170 107 Op 1 8/0.054 + CDS 189936 - 190682 679 ## COG3736 Type IV secretory pathway, component VirB8 171 107 Op 2 11/0.027 + CDS 190679 - 191506 773 ## COG3504 Type IV secretory pathway, VirB9 components 172 107 Op 3 8/0.054 + CDS 191510 - 192832 1179 ## COG2948 Type IV secretory pathway, VirB10 components + Term 192839 - 192873 8.1 173 107 Op 4 . + CDS 192878 - 193975 1129 ## COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis + Term 193992 - 194027 7.4 174 108 Op 1 . + CDS 194044 - 194427 555 ## COG0629 Single-stranded DNA-binding protein + Term 194428 - 194467 9.1 175 108 Op 2 . + CDS 194492 - 196528 2189 ## COG3505 Type IV secretory pathway, VirD4 components + Term 196543 - 196583 8.7 176 109 Op 1 . + CDS 196595 - 199012 2574 ## COG4643 Uncharacterized protein conserved in bacteria + Term 199025 - 199069 8.2 177 109 Op 2 . + CDS 199079 - 200701 826 ## COG2369 Uncharacterized protein, homolog of phage Mu protein gp30 + Term 200716 - 200756 10.6 178 110 Op 1 . + CDS 200763 - 201344 628 ## Mrad2831_6341 mobilisation protein 179 110 Op 2 . + CDS 201334 - 202440 1135 ## COG3843 Type IV secretory pathway, VirD2 components (relaxase) 180 110 Op 3 . + CDS 202458 - 202949 506 ## gi|261363794|ref|ZP_05976677.1| conserved hypothetical protein 181 110 Op 4 . + CDS 203002 - 204594 1372 ## COG0270 Site-specific DNA methylase + Term 204612 - 204663 23.1 + Prom 204666 - 204725 3.8 182 111 Op 1 2/0.216 + CDS 204808 - 205182 405 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs 183 111 Op 2 . + CDS 205122 - 205433 277 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs 184 112 Tu 1 . - CDS 205708 - 206034 226 ## gi|261363798|ref|ZP_05976681.1| conserved hypothetical protein - Prom 206089 - 206148 1.6 185 113 Op 1 . - CDS 206335 - 206568 286 ## gi|261363800|ref|ZP_05976683.1| putative ankyrin repeat protein FPV115 186 113 Op 2 . - CDS 206616 - 207008 329 ## Ajs_4298 antirestriction protein 187 113 Op 3 . - CDS 207052 - 207339 273 ## 188 113 Op 4 . - CDS 207409 - 207660 371 ## gi|288575290|ref|ZP_06393615.1| hypothetical protein NEIMUCOT_03743 + Prom 208213 - 208272 6.3 189 114 Tu 1 . + CDS 208320 - 208733 325 ## gi|288575291|ref|ZP_05976687.2| conserved hypothetical protein + Term 208737 - 208774 8.7 - Term 208723 - 208762 9.1 190 115 Tu 1 . - CDS 208792 - 208986 159 ## gi|288575292|ref|ZP_05976688.2| conserved domain protein - Prom 209050 - 209109 3.5 - Term 209365 - 209399 3.1 191 116 Op 1 . - CDS 209414 - 210175 542 ## gi|261363806|ref|ZP_05976689.1| conserved hypothetical protein 192 116 Op 2 . - CDS 210191 - 210403 152 ## COG1396 Predicted transcriptional regulators - Prom 210508 - 210567 4.7 + Prom 210384 - 210443 3.7 193 117 Tu 1 . + CDS 210520 - 211164 212 ## AXYL_02046 hypothetical protein + Term 211359 - 211391 -1.0 + Prom 211891 - 211950 5.4 194 118 Op 1 . + CDS 212039 - 212344 159 ## gi|288575299|ref|ZP_05976694.2| conserved domain protein 195 118 Op 2 . + CDS 212334 - 212606 158 ## COG3668 Plasmid stabilization system protein + Term 212624 - 212659 7.4 196 119 Op 1 . + CDS 212956 - 213177 131 ## gi|261363813|ref|ZP_05976696.1| conserved hypothetical protein 197 119 Op 2 . + CDS 213214 - 213717 453 ## gi|261363814|ref|ZP_05976697.1| conserved hypothetical protein 198 119 Op 3 . + CDS 213782 - 213952 180 ## gi|288575300|ref|ZP_05976698.2| conserved hypothetical protein 199 119 Op 4 . + CDS 213939 - 214256 181 ## gi|261363816|ref|ZP_05976699.1| conserved hypothetical protein 200 119 Op 5 . + CDS 214225 - 214590 205 ## gi|288575301|ref|ZP_05976700.2| cytochrome c oxidase subunit 1 201 120 Op 1 . + CDS 214906 - 215130 281 ## + Term 215143 - 215178 6.5 202 120 Op 2 . + CDS 215213 - 215398 237 ## gi|288575300|ref|ZP_05976698.2| conserved hypothetical protein + Term 215403 - 215435 1.5 + Prom 215411 - 215470 1.7 203 121 Tu 1 . + CDS 215504 - 216031 271 ## PMIP19 putative conjugal transfer protein + Term 216080 - 216114 4.3 204 122 Op 1 . + CDS 216152 - 217009 846 ## Veis_5052 transfer origin protein, TraL 205 122 Op 2 . + CDS 216993 - 217469 435 ## gi|261363822|ref|ZP_05976705.1| putative cellulose-binding protein 206 122 Op 3 . + CDS 217479 - 217745 220 ## gi|261363823|ref|ZP_05976706.1| conserved hypothetical protein 207 122 Op 4 . + CDS 217742 - 218068 181 ## gi|261363824|ref|ZP_05976707.1| toxin-antitoxin system, antitoxin component, Xre family 208 122 Op 5 . + CDS 217945 - 218946 966 ## COG0582 Integrase + Term 219101 - 219139 -0.1 - Term 219087 - 219129 -0.8 209 123 Tu 1 . - CDS 219217 - 219492 210 ## COG3313 Predicted Fe-S protein - Prom 219726 - 219785 6.0 - Term 219788 - 219834 12.8 210 124 Tu 1 . - CDS 219862 - 220233 586 ## NGO1981 hypothetical protein - Prom 220431 - 220490 5.6 211 125 Tu 1 . + CDS 220789 - 222057 1874 ## COG1914 Mn2+ and Fe2+ transporters of the NRAMP family + Term 222068 - 222125 18.4 - Term 222226 - 222292 17.0 212 126 Tu 1 . - CDS 222306 - 222770 923 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins - Prom 222834 - 222893 5.3 + Prom 222840 - 222899 2.1 213 127 Op 1 . + CDS 222963 - 223739 631 ## COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 214 127 Op 2 . + CDS 223741 - 224211 216 ## gi|261363831|ref|ZP_05976714.1| conserved hypothetical protein 215 127 Op 3 . + CDS 224264 - 224722 325 ## gi|288575311|ref|ZP_05976715.2| conserved hypothetical protein 216 128 Tu 1 . + CDS 224828 - 225718 854 ## COG1354 Uncharacterized conserved protein + Term 225857 - 225899 -0.8 217 129 Tu 1 . + CDS 225950 - 227284 1752 ## COG1114 Branched-chain amino acid permeases + Prom 227335 - 227394 4.1 218 130 Tu 1 . + CDS 227423 - 228646 1908 ## COG1488 Nicotinic acid phosphoribosyltransferase + Term 228668 - 228718 14.2 - TRNA 228962 - 229038 82.1 # Pro GGG 0 0 + Prom 229201 - 229260 3.5 219 131 Op 1 . + CDS 229288 - 230667 1335 ## COG3264 Small-conductance mechanosensitive channel 220 131 Op 2 2/0.216 + CDS 230667 - 231116 423 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes + Term 231136 - 231186 11.1 + Prom 231159 - 231218 4.4 221 132 Tu 1 . + CDS 231249 - 231782 774 ## COG0221 Inorganic pyrophosphatase + Term 231808 - 231850 11.2 - TRNA 231999 - 232073 64.3 # Glu TTC 0 0 - TRNA 232090 - 232166 81.7 # Arg ACG 0 0 222 133 Tu 1 . + CDS 232249 - 233688 688 ## COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases + Term 233708 - 233761 13.2 + Prom 233698 - 233757 4.2 223 134 Tu 1 . + CDS 233898 - 234695 536 ## COG0561 Predicted hydrolases of the HAD superfamily + Term 234713 - 234754 8.0 + Prom 234874 - 234933 5.8 224 135 Tu 1 . + CDS 235079 - 235885 1033 ## COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase + Term 235890 - 235932 9.1 - Term 235878 - 235919 9.7 225 136 Tu 1 . - CDS 235950 - 236831 1223 ## COG0524 Sugar kinases, ribokinase family + Prom 237152 - 237211 4.6 226 137 Tu 1 . + CDS 237288 - 238346 1343 ## COG0787 Alanine racemase + Term 238370 - 238432 3.3 + Prom 238807 - 238866 5.7 227 138 Op 1 9/0.054 + CDS 238905 - 239177 418 ## COG3830 ACT domain-containing protein 228 138 Op 2 . + CDS 239192 - 240547 1847 ## COG2848 Uncharacterized conserved protein + Term 240566 - 240617 10.2 + Prom 240598 - 240657 3.8 229 139 Tu 1 . + CDS 240698 - 241117 507 ## COG1765 Predicted redox protein, regulator of disulfide bond formation + Term 241215 - 241262 8.0 + Prom 241173 - 241232 4.4 230 140 Tu 1 . + CDS 241479 - 242195 987 ## COG1802 Transcriptional regulators + Term 242212 - 242263 8.2 231 141 Tu 1 . + CDS 242343 - 243425 1058 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase + Prom 243435 - 243494 2.5 232 142 Tu 1 . + CDS 243542 - 244312 766 ## COG0730 Predicted permeases + Prom 244327 - 244386 5.4 233 143 Op 1 . + CDS 244416 - 245516 1688 ## COG0082 Chorismate synthase + Prom 245584 - 245643 5.0 234 143 Op 2 . + CDS 245745 - 246209 726 ## NGK_1557 hypothetical protein + Term 246229 - 246277 16.5 - Term 246749 - 246810 9.8 235 144 Tu 1 . - CDS 246821 - 249478 2156 ## COG2931 RTX toxins and related Ca2+-binding proteins - Prom 249635 - 249694 9.7 - Term 250157 - 250208 15.1 236 145 Op 1 4/0.108 - CDS 250226 - 250720 872 ## COG4314 Predicted lipoprotein involved in nitrous oxide reduction 237 145 Op 2 24/0.000 - CDS 250717 - 251547 1383 ## COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component 238 145 Op 3 6/0.054 - CDS 251544 - 252440 1446 ## COG1131 ABC-type multidrug transport system, ATPase component - Term 252639 - 252681 -0.8 239 146 Tu 1 . - CDS 252824 - 254179 2189 ## COG3420 Nitrous oxidase accessory protein - Term 254397 - 254441 -0.3 240 147 Op 1 . - CDS 254544 - 256514 2570 ## COG4263 Nitrous oxide reductase - Prom 256586 - 256645 3.6 241 147 Op 2 . - CDS 256676 - 258946 2256 ## COG3901 Regulator of nitric oxide reductase transcription - Prom 259071 - 259130 8.6 - Term 259252 - 259301 17.2 242 148 Op 1 7/0.054 - CDS 259327 - 260202 1159 ## COG0777 Acetyl-CoA carboxylase beta subunit 243 148 Op 2 . - CDS 260262 - 261146 503 ## PROTEIN SUPPORTED gi|149916131|ref|ZP_01904653.1| 50S ribosomal protein L25/general stress protein Ctc - Prom 261379 - 261438 2.6 + Prom 261300 - 261359 4.2 244 149 Op 1 1/0.297 + CDS 261394 - 262260 1131 ## COG2354 Uncharacterized protein conserved in bacteria + Term 262272 - 262332 10.1 + Prom 262263 - 262322 2.0 245 149 Op 2 . + CDS 262342 - 263883 1517 ## COG0815 Apolipoprotein N-acyltransferase + Term 263890 - 263929 1.8 246 150 Tu 1 . - CDS 263946 - 264413 558 ## COG3293 Transposase and inactivated derivatives Predicted protein(s) >gi|257257262|gb|ACDX02000001.1| GENE 1 110 - 460 389 116 aa, chain - ## HITS:1 COG:no KEGG:NLA_8450 NR:ns ## KEGG: NLA_8450 # Name: not_defined # Def: transposase # Organism: N.lactamica # Pathway: not_defined # 1 116 106 221 221 206 94.0 2e-52 MSKYTLHFKYQAVLHYLHIRSQQRTADHYGISRTHLRRWIRAYQEGGIGALEHPQSKTMT DHRKNPFIVDKPDHEKTQAELIEELCYMRAKVAYLKELKALSQKRTAKDKAKPSKH >gi|257257262|gb|ACDX02000001.1| GENE 2 684 - 1787 1499 367 aa, chain + ## HITS:1 COG:NMA1744 KEGG:ns NR:ns ## COG: NMA1744 COG0482 # Protein_GI_number: 15794637 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain # Organism: Neisseria meningitidis Z2491 # 1 366 17 382 383 727 95.0 0 MDITQQPSNIIVGLSGGVDSSVTAALLKQQGYQVRGVFMQNWEDDDNDEYCSIKQDSFDA IAVADIIGIDIDIVNFAAQYKDNVFAYFLKEYSAGRTPNPDVLCNAEIKFKCFLDYAIEQ GADTIATGHYARKEVRNGVHYLLKGLDQNKDQSYFLYRLKPFQLERAIFPLGDLEKPEVR RLAAEFNLPTAAKKDSTGICFIGERPFREFLQKYLPTNNGKMVTPEGKTVGEHVGLMFYT LGQRKGLGIGGAGEPWFVAAKDLTKNELIVVQGHDHPLLYTRSLVMNDLSFTLPERPKEG RYTCKTRYRMADAPCELRYLDDETVELVFDEPQWAVTPGQSAVLYDGDVCLGGGIIMSTD KPVIITA >gi|257257262|gb|ACDX02000001.1| GENE 3 1894 - 3567 2489 557 aa, chain + ## HITS:1 COG:NMA1743 KEGG:ns NR:ns ## COG: NMA1743 COG0318 # Protein_GI_number: 15794636 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Neisseria meningitidis Z2491 # 1 552 1 552 556 1022 89.0 0 MEKLWLNSYEQGVNAEIDITQYSSISDVFRQSVEKFAHQPAFQNMGKTLTYAEVGKLAQD FASYLQNVLKLPRGERVAIMLPNLLQYPIALFGILQAGLVAVNTNPLYTPRELEHQLKDS GATTIIVLENFANTLELVLPRTQIKHVIVASVGEMFGFFKGTLMNFVLRKIKKMVPEYRI SGAIPFQTTLKEGAAHTFRPVTLTREDTALLQYTGGTTGVAKGAVLSHGNICANMLQAKE WIKFQLREGKETVIAALPLYHIFALTVNLMIFANTGSKIILITNPRDMKGFIGELKKERI SVFIGVNTLFNGMVNQPDFATVDFSNLRLTLGGGMATQKAVAEKWKKITGTPIVEAYGLT EASPGVCCNPLNIEAYSGGIGLPVPSTEIELRDANGKEVSIGQPGELWVRGPQVMQGYWN RPEETAKTIDSRGFLETGDIAVMDEKGWLKLVDRKKDLIVVSGFNVYPNEIEEVVSHNDK VMEVACVGVPNEKTGEALKVFVVKKDPSLTKEELIAFCRSELTAYKVPKDIEFRDELPKS NVGKILRRELREQAQNK >gi|257257262|gb|ACDX02000001.1| GENE 4 3637 - 4617 1659 326 aa, chain + ## HITS:1 COG:NMB0845 KEGG:ns NR:ns ## COG: NMB0845 COG1702 # Protein_GI_number: 15676741 # Func_class: T Signal transduction mechanisms # Function: Phosphate starvation-inducible protein PhoH, predicted ATPase # Organism: Neisseria meningitidis MC58 # 1 315 1 315 317 537 85.0 1e-152 MTHTVHLQFEDIDNTVLQRLCGALDGNLEALGKALDIQISRRFEHFTFMGELAHAGRRAL LALAEAAEQGDLDDNAIRLAAVEAKTADEKHEEKHHDQQYYFRTKRGSIGGRTPRQNGYI RALLNHDVVFGLGPAGTGKTYLAVAAAVDAMEKHQIERIVLVRPAVEAGEKLGFLPGDLA QKVDPYLRPLYDALYDLMGFDRVTKLMEKGLIEIAPLAYMRGRTLNGAYVILDEAQNTTP EQMKMFLTRIGFGAKAVITGDISQIDLPRNIKSGLKDAREKLRDVEGLYFHTFTSEDVVR HPLVQKIVEAYEAAEGQAEKNNTAER >gi|257257262|gb|ACDX02000001.1| GENE 5 4784 - 6940 3057 718 aa, chain - ## HITS:1 COG:NMA1917 KEGG:ns NR:ns ## COG: NMA1917 COG0317 # Protein_GI_number: 15794802 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Guanosine polyphosphate pyrophosphohydrolases/synthetases # Organism: Neisseria meningitidis Z2491 # 1 718 8 725 725 1322 89.0 0 MPAPQPTAPYDALTAEARELLFRTASYLSPSEQVELEKTVAYAFHAHDGQTRKSGEPYIT HPLAVATQLALWHMDIQGLCAGVMHDVLEDTGVSKIEMAAEFGETISEMVDGLSKLEKLK FEDHAEHQAESFRKLILAMTKDVRVIVVKLADRLHNMRTLGSMRPDKRRRIAKETLEIYA QIANHLGLNNAYQELQDLSFQNLHPSRYETLKKAMDNSRKNRRDVVGKVLRAFSQRLVGM NIEAKIKGREKNLYSIHQKMLAKKLRFAEVMDIYGFRVIVNSIPACYAALGALHNLYQPK PGRFKDYIAIPKSNGYQSLHTTLVGPYGLPIEVQIRTREMDAVAEGGIAGHWIYKSGENT VDQAVLHTNQWLKNILDLQASSANAIEFLEHVKVDLFPNEVYILTPKGKILTLPKGSTPI DFAYAVHTDIGHKTVAARINNTMMPLRTKLKTGDSVEIITSEHAKPNPAWLNFTVSSRAR SAIRQYVKNLNRHDAIILGENLLQKALSSLLPKDVLLSDDLKEKYLADLNDKQTSFEEVL YNVGMGHTLPVYVAMHIAELAGQHFGSEVKLSPIKVNDQETGRIHFAECCHPVPGDSVRA LLVKDKGMIIHRDTCPTLLKSDPEQQLDANWEGIGSHTYRTGLSIQSEDSHGLLALMAQA ISNSGADIESVETPNKALAGTEGFVEFKFIIKVRDLAQINQIIHNLHAIPQVRKVVRS >gi|257257262|gb|ACDX02000001.1| GENE 6 7051 - 7257 447 68 aa, chain - ## HITS:1 COG:NMA1918 KEGG:ns NR:ns ## COG: NMA1918 COG1758 # Protein_GI_number: 15794803 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, subunit K/omega # Organism: Neisseria meningitidis Z2491 # 1 68 1 68 68 112 92.0 2e-25 MARITTEDCTGKIPNHFDLTLVAARRARQLENGNAPMVDDIRNNKPTVTALREIAAGQIG TELLTRNK >gi|257257262|gb|ACDX02000001.1| GENE 7 7317 - 7973 659 218 aa, chain - ## HITS:1 COG:NMA1919 KEGG:ns NR:ns ## COG: NMA1919 COG0194 # Protein_GI_number: 15794804 # Func_class: F Nucleotide transport and metabolism # Function: Guanylate kinase # Organism: Neisseria meningitidis Z2491 # 14 218 1 205 205 310 78.0 1e-84 MLQLTDNSIGTKIMKPHKKGTIFIISAASGTGKTTLVSRLLKNNGDLRVSVSHTTRQPRE GEQHGVHYHFVPKEEFESLIEQKAFLEHANVFGNYYGTSIAGVNSLSEEGYDVILEIDVQ GAAQVRKSLPEASSIFILPPSFEVLAERLIGRGTDSEEVIQARLSKARHEIEQSVLFDYI VVNDDLDRAEADLLHIIKAGRLKKSSQQGFISNLLENS >gi|257257262|gb|ACDX02000001.1| GENE 8 8087 - 8647 859 186 aa, chain + ## HITS:1 COG:NMA1920 KEGG:ns NR:ns ## COG: NMA1920 COG0503 # Protein_GI_number: 15794805 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Neisseria meningitidis Z2491 # 1 186 12 197 199 327 89.0 6e-90 MLVHPEAMGVAELADKIRKIENWPQKGILFHDITPVLQSAEYFRLLVDLLVYRYMGQKID VVAGLDARGFIIGAALAYQLNVGFVPIRKKGKLPFDTISQSYALEYGEATVEIHKDAVKP GARVLLVDDLVATGGTMLAGVELIRKLGGEVVEAAAILEFTDLIGGSKIRENGVPLFTLL QNEGCM >gi|257257262|gb|ACDX02000001.1| GENE 9 8818 - 10665 2575 615 aa, chain + ## HITS:1 COG:NMA0503 KEGG:ns NR:ns ## COG: NMA0503 COG0741 # Protein_GI_number: 15793502 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Neisseria meningitidis Z2491 # 22 614 21 616 616 778 69.0 0 MNAQRIFSFSLSLIAAAVLSACASENDTTSSKEPGSSLTEPASIPARRAEGESKVLSDYG QYQGALDAAKRGDDMWVQQFLAQAGDSAMAENVRNEWLKSLGARGQWDTFHQENKKLNAA GRVQEVQCYAELSSGSYNMVAELVRVTNKLPAGCTRLVESAASAGRLNSNDAWRRVRGLL SNSQTSDARSLAAALGSPFEGGSQGAREYSLLNVIGKDARKSSSAASTLSSMESGLSREQ SSFAWGVLGHHHAQNQNMQTALSYYGRVSDHKQLTDEQFEWYARAALRLQRWNELSGIIQ QMPDKLQKDPTWQYWLGRSYAAQGNQSRAKDMYEKAAASGRNFYAVLAGEELGRRVNTKN NVSDADKKDVRRMADDGAIKRALVLFKNSQSSNDAKMRRQAQAEWRFATRDFNEDNLLTA AQVAFENQLYDMAINSADRTERKLNYNLRYLSPFKETTVRYASQAGVDPAWVYGLIRQES RFVMGAQSSVGAQGLMQVMPATAREIAGKIGMSSSELYTMDGNIRMGTWYMADAKRRLQN NEVMATAGYNAGPGRARNWQASTPLEGAIYAETIPFTETRDYVKKVMTNATFYASLFNEP QTSLKQRMGTVPGRY >gi|257257262|gb|ACDX02000001.1| GENE 10 11186 - 11746 247 186 aa, chain + ## HITS:1 COG:NMB1496 KEGG:ns NR:ns ## COG: NMB1496 COG1187 # Protein_GI_number: 15677349 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Neisseria meningitidis MC58 # 1 186 1 186 186 298 74.0 3e-81 MNDLIVLSKPYGVICQFSAHEKYGCLKDYVSLPDFYPAGRLDTDSEGLLLLTNDGRLQAR IADPKFKLEKTYWAQVEGSPDEAKLDMLRRGVDLGDFVTRPAKVRVLETGEADVLWQRVP PIRVRKSVPDFWVEIRISEGKNRQVRRMTAKAGFPCLRLVRVAIGRLNLFDLGLALGQWA FAPHKP >gi|257257262|gb|ACDX02000001.1| GENE 11 11854 - 12660 1218 268 aa, chain - ## HITS:1 COG:NMB1475 KEGG:ns NR:ns ## COG: NMB1475 COG5266 # Protein_GI_number: 15677329 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Co2+ transport system, periplasmic component # Organism: Neisseria meningitidis MC58 # 1 268 1 268 268 493 88.0 1e-139 MKKTALFIASALLFSTAAEAHRVWVETAHTHGGEYLQAELGYGEFPELEPIAKDRLHIFS KPMQLVTEKGKENLIQKGTFNYQYRSKQPVKDGSYLVIAEYQPTFWSKNSAGWKQASIKE MPDANYCEQTRMFGKNIVNVGHESADTAVITKQVGQHLEIVPLDNPANVHVGERFKVRVL FNGEPLPNATVTATFDGFDTSDRSKTHKTEAQAFSDTTDDKGEVSIIPLRQGFWKASVEH KADFPDQSVCQKQANYTTMTFQIGHTHH >gi|257257262|gb|ACDX02000001.1| GENE 12 12951 - 14078 1485 375 aa, chain - ## HITS:1 COG:NMB0928 KEGG:ns NR:ns ## COG: NMB0928 COG3317 # Protein_GI_number: 15676822 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized lipoprotein # Organism: Neisseria meningitidis MC58 # 1 375 24 398 398 546 73.0 1e-155 MAYMKPVVVAIALISMTACSGNKKDLPKLDYQTQTRKIVKLEVPPDLTNPDQGNLYQVPA GSGAVRASDLSRRTSATQQAANSEVLKSVKGVRLERDGNQRWVEVQGKSPAEIWPLLKAF WQENGFDIKSEEPGIGQMETEWAENRAKIPQDGLRRLLDKVGLGGIYSTSERDKFIIRIE QSKNGTTDVFFAHKGMKEVYADKNKDTTTWQPAANDPNLEAAFLARFMQYMGVDQQQAEN ALTQSVAKRSGNELARIDGNTLLVSGDYGRNWRRTALALDRIGLNVLGQNIERHAFLVQQ APNESEAVSTKKPGFFSRMFGKGKKVEKPAAYPEIIVFVEPVNGGSRIRLLNKDGSAYNG SDASTLISRLHTELR >gi|257257262|gb|ACDX02000001.1| GENE 13 14151 - 15032 1338 293 aa, chain - ## HITS:1 COG:NMB0929 KEGG:ns NR:ns ## COG: NMB0929 COG0329 # Protein_GI_number: 15676823 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Neisseria meningitidis MC58 # 1 291 1 291 291 516 89.0 1e-146 MLQGSLVALITPMNQDGSIHYEQLRDLIDWHIESGTDGIVAVGTTGESATLSVEEHLSVI EETVKHVNKRVPVIAGTGANNTLEAIALSRAAEKAGADYTLSVVPYYNKPSQEGIYQHFK TIAEATSIPMIIYNVPGRTVVSMTNDTILRLAKIPNIVGVKEASGNIGNNLELIKHAPEG FTILSGDDPTGLPFMLCGGHGVVTVAANVAPKLFADMCRAALAGDIATARQLNDRLIPIY NTMFCEPSPAAPKWGVSALGKCDPYVRLPLVPLSETGQAKVRAALQESGQLTA >gi|257257262|gb|ACDX02000001.1| GENE 14 15379 - 16089 832 236 aa, chain + ## HITS:1 COG:mll2427 KEGG:ns NR:ns ## COG: mll2427 COG1296 # Protein_GI_number: 13472209 # Func_class: E Amino acid transport and metabolism # Function: Predicted branched-chain amino acid permease (azaleucine resistance) # Organism: Mesorhizobium loti # 9 231 16 239 244 256 59.0 4e-68 MTHPNSPQSEFLRGIKECSPMLIGLLPWALILGVQGGQKGMSWLEMLLMTGMNFAGGSEF AAVNLWTNPLPILIIATVTFMINSRHILMGAAIAPYMRDMPLKKAMPALFFMCDESWALA FAEIQKRKAMGLPAFNMPYYAGVCFILYTTWIGFAAFGAAVGPMFGDVAAWGFGMAFPAV FLVLLRGMWKSFKEARPWFISLIVACGTYLSVDGHWYVPMGAISGLLAAYLWGEKE >gi|257257262|gb|ACDX02000001.1| GENE 15 16086 - 16394 366 102 aa, chain + ## HITS:1 COG:BMEII0516 KEGG:ns NR:ns ## COG: BMEII0516 COG4541 # Protein_GI_number: 17988861 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Brucella melitensis # 11 101 8 98 99 98 65.0 4e-21 MKDLLSWQSFLLFASMLAVTYSTRLIGFFALRNRTLSRRAQIVMEAAPGCVLISVIAPYF VSDKPHELIAIALTVLAASRFSMLVTVLIGVGSSGLLGYLMR >gi|257257262|gb|ACDX02000001.1| GENE 16 16486 - 17235 454 249 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 [Bacillus selenitireducens MLS10] # 2 243 4 246 255 179 40 1e-43 MANQRLIYGFHAVNARLWQNPKSITELYIQEGKNDARTRDVLEKAANENVRVHFADADRL NAISKGARHQGVVGFIDASKNHVHLEDVLENLSEPPLLLILDGITDPHNLGACLRTADAM GVHAVIAPKDKSAGLNATVSKVACGAAETVPYITVTNLARTLRELKEYGIWIIGTDMGGD ADLYHCDLPDSAAWVMGNEGEGMRRLTREHCDMLVSIPMFGTVESMNVSVSAGMVLSETR RQRVLKAEN >gi|257257262|gb|ACDX02000001.1| GENE 17 17585 - 18538 1244 317 aa, chain - ## HITS:1 COG:SA0232 KEGG:ns NR:ns ## COG: SA0232 COG0039 # Protein_GI_number: 15925944 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Staphylococcus aureus N315 # 5 315 6 316 317 372 55.0 1e-103 MKKVGNKVVVVGLGAVGVSYAYSMLNQALCDDMVLIDINRTRAEGEARDFRHGMPYAASP ARIYVGDYDDCSDADIVCICAGAAQAPGETRLDLIDKNLRIFRDIVSKVMASGFDGIFLV ASNPVDVLSYAVLRFSGLPKERVIGSGTILDSARFRVCLGNEFDVAPWSVDAMMIGEHGD SIIALWSTANIAGMSVQKMLEQSEDGQARMDKIYTTVRNAAYEVIAAKGSTSHGIGMGLS RISNAILHNQGVVLPVSTLLEGEFGQNGVYIGVPTVVNRQGAVRIIDLQLSDDEAERFAR SAELLKSYQRKVDEMVG >gi|257257262|gb|ACDX02000001.1| GENE 18 18851 - 19672 994 273 aa, chain + ## HITS:1 COG:no KEGG:D11S_2007 NR:ns ## KEGG: D11S_2007 # Name: not_defined # Def: lipoprotein # Organism: A.actinomycetemcomitans # Pathway: not_defined # 10 273 1 263 263 374 76.0 1e-102 MNHDNERKRMKAKSLLAVLAATCILSACSSAGSSLADGLTKPFDPNAKDWKQLTVSESVP DGGVLELTDRGGKTQTLKKGGVLDTGYLKNDRVSDFDYVKKINVNGQLIELERGDFLVYK QSHSIVAATLAKQKTNPSDGARSEAFDFHVNEIQGQDIAFGNLPKLGQINYKGIAFNGDD RSGRLSYAVDFEKKQGSGSISGMHSGYNVELAKTDIQAMGNGSGLSGKAMKDGVEKGSYE LKLFGSKAEEIAGKAKINDGGKTQEIGLAGKKE >gi|257257262|gb|ACDX02000001.1| GENE 19 19926 - 20777 1161 283 aa, chain - ## HITS:1 COG:NMB1349 KEGG:ns NR:ns ## COG: NMB1349 COG3782 # Protein_GI_number: 15677214 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 1 281 1 283 285 386 67.0 1e-107 MNYALDALWWKLTTSTVRDLATLLTAPPLWQSGCELSVRELLGERGFRYLLDLDGNPAPL NDYLAEHAPFGNRLGIYAERLLAFWFTHAPHTELHAYNLPVFSDDLTQGAADFIASINGK PYHIELTCKYYGSDSGKSAEMRGLNAKDTLAAKAAKLPRQLALLQSPEGSETLRQNRLPD APQPASIIRGIGFFPVGADSAEAPLNPYCWRGVFIRDWSAYPTTEDAHYHLIDRMAYLAP ARVAEAQTLSDRDVRQIESGLIAKLELRPDGFWHEIERIMKVA >gi|257257262|gb|ACDX02000001.1| GENE 20 20847 - 21662 1170 271 aa, chain - ## HITS:1 COG:NMA1560 KEGG:ns NR:ns ## COG: NMA1560 COG0565 # Protein_GI_number: 15794453 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylase # Organism: Neisseria meningitidis Z2491 # 1 271 22 292 292 477 90.0 1e-134 MTSAKPELPDYLGNIRIILTRTSHPANIGSAARAMKTMGLHKLTIVAPNLMSTPMTEQPP VFNPENPQDFQLPEESFILASGAADVLHNAVIAATLDEALADTTLACALTSRRREITAPL QTPRELVPELLQAAQRGEQVALVFGNETFGLSIEEVQACNRLMTINGNPDYFSLNLAQAV QVVCYEIFSQTDMPMTHLQQEDHAATHEQIKGMVAHMESVMDDIGFFNRRNSERLMRRMQ SLFGRANTQTEDIDILRGFFNTVSHRLKKKD >gi|257257262|gb|ACDX02000001.1| GENE 21 21846 - 22631 862 261 aa, chain + ## HITS:1 COG:NMB1347 KEGG:ns NR:ns ## COG: NMB1347 COG0483 # Protein_GI_number: 15677212 # Func_class: G Carbohydrate transport and metabolism # Function: Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family # Organism: Neisseria meningitidis MC58 # 1 261 1 261 261 506 93.0 1e-143 MNPFLNTAFKAARKAGQMMIRASGNLDAVKVDSKAFNDFVSDVDRNSEMILVDALKEAYP HHKITCEEGGSHGKASAEYEWIIDPLDGTTNFLHGHPQYAISMALLHKGVLQEALVYAPE RNDVYMASRGKGALLNDRRIRVSSRIELNRCLIGTGFPVVDQSMMDKYLAILKDFLAKTA GGRREGAASLDLCAVAAGRLDGFFEFNLKPWDIAAGALIVQEAGGIVTDMSGNEGWLESG DIVAANPKVLAQMLQIIAGHL >gi|257257262|gb|ACDX02000001.1| GENE 22 22991 - 24130 1208 379 aa, chain + ## HITS:1 COG:VC1621 KEGG:ns NR:ns ## COG: VC1621 COG1538 # Protein_GI_number: 15641628 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Outer membrane protein # Organism: Vibrio cholerae # 97 376 142 425 445 61 23.0 3e-09 MVSDPIVKEAKATEDSAKSTTKATRARHYPVLTLTGTKVLAQKNKYSSSDMSDGVGIRGT VNVYSWGAINAAVRRDKNREQYYHQRYFENQERLGSDIGKLYLTALRAKEILRINRQSLV RHNNLLKDLNIIVKYDSGRRSELIEARARQLQVESSIAQQQRTMELALSRLSRYTGRQLT AEDLEDPFANDSAESLVRRFKTADNNTNPSYRAQVAERDSVKADLDVSKAERLPAVNLEG NANRDNRQLYLNVAWNVLDVAARHNVQKNADALIAAESKSEQIMRDITEKTQTAEIDMRE SERRADIAAQHIAAQKDVVKTYELQFKIARRTLTDVLGAYNELSSIEQENISARNDFRDA ALDYLAAQAQMANWAGLKQ >gi|257257262|gb|ACDX02000001.1| GENE 23 24170 - 26353 194 727 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 474 692 131 346 398 79 27 1e-13 MKAIIEHIVLVTRLLGAPVSEAALTAEVVRDKKLNVNYHSLVEVLRSHGFENTLSKRNLE DIPSLAVPVMIILHNEEAAVITNIEGSGRNRKYHIRQVDGLEQQLDHDQLSGLYLGYCWF IKPKMAADTRSELPEYHLPKAWFWKVIWRFRSYYYQVILATIIINFLALVSSLYVMNVYD RVIPNQAYETLWVLSIGVVLAILFEFAAKMIRGHLTDIAGKKADLIISSALFRRVMALRL ADRPASSGSYANNLREFESVREFMTSASLLTLVDLPFLLLFIFVISIVGGKLALVPLAII PIVVIVGFIVQRPLSRHINESMKESSQRSGLAVEAIEGIETLKTNNATSWAQQRWDEYTA KTSASSIKVKDTSNFMVNFAVAMQQLNTVFLVVVGTYLIHADNHAERITMGALIASVILS GRALAPLAQVAGLATRFQQAKLALRGVNDIVSRPIERSPERKYITLDNVQGNIAFENVTF KYKNESNNAVDELRINIRPGEKVGILGRIGSGKSTMLKLASGLYDTEKGNVTLDGVDMRQ LDPNFLRNQVLLFSQSPRLFLGTLRENMDLARTDSYSTDQDLLTALKRFGLDQIIRNHPR GLDMPLGEDGLGLSGGQKQIIALARMTLRDPKVVLLDEPTTSLDQGTERMALNAIAQWGR NRTMLLVTHRPQVLQIVNRIIVMENGKVVMDGPRDLVLQKLMQNEQNKVKAAQQAQENQR PNEAAQA >gi|257257262|gb|ACDX02000001.1| GENE 24 26444 - 27670 1690 408 aa, chain + ## HITS:1 COG:STM2692 KEGG:ns NR:ns ## COG: STM2692 COG0845 # Protein_GI_number: 16766006 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Salmonella typhimurium LT2 # 21 408 6 387 387 317 44.0 3e-86 MSENNVKSKDLHLINDLNAALQKEKHSGQFWVIILFFLLLVVFVVWAYNSTVEEVTRGNG NVIPSSREQVIQSLDPGVITQMMVKEGDLVEKDQILLKLDDTRSLAVLRESEAKVQNLEA TIARLKAEAYGGKLTFPKNVSPELRRRETAAYNARRQAMTDAVQSLVQSKAALDREIAIT APMVAQGVMSEVELLKMRRESSDLTLQIAERRNRYRADANNELVQSESELAQSKENMAMR ADPVDRSQIRAPMRGIVKNIKINTIGGVVNPGEEIMQIVPVDDKLLVEAYIRPQDIAFIR AGQPALVKVSAYDYSIYGGLDGKVTLVGADTVSNSMQSRANDLKLDPNQVYYRVIVQTEN NTLKDKNGKDMPIIPGMVATVDIKTGEKTIFQYLIKPITRMKQALSER >gi|257257262|gb|ACDX02000001.1| GENE 25 27929 - 29239 1898 436 aa, chain + ## HITS:1 COG:NMA1364 KEGG:ns NR:ns ## COG: NMA1364 COG2895 # Protein_GI_number: 15794285 # Func_class: P Inorganic ion transport and metabolism # Function: GTPases - Sulfate adenylate transferase subunit 1 # Organism: Neisseria meningitidis Z2491 # 1 425 1 427 428 493 60.0 1e-139 MTATTAPLLRFITAGSVDDGKSTLIGRLLYDSKTLLTDQLDKLNRAAENGETPDFASLTD GLAAEREQGITIDVAYRYFATPKRKFIIADTPGHEQYTRNMVTGASTADAAIVLIDATRV DFSGGEPVLLPQTKRHSAILKLLGCPNIIVAVNKLDLLDFDETKYQAIAAAYRKLAEQIG LHAQIHFLPISALKGDNIVNASSQTPWYQGLPLLPLLESLPVNRQNAADQAAHFPVQRVA RQDGSSSDDFRGYQGRLEAGRLKTGDEIKILPSGHTAKIAEIYNPNGKTESAEAGEVLTV ALDTDLDISRGNSIAAADSPVAPEQQFQAALCWFDDIPLNLRRKYLLKHTTQTTPVKISA ISYVWDVNTLSRVESADTLKLNDIGSVSLKTQQPIAAAPYEENHALGAFILIDEATNHTV AAGMIRKADQADSFEI >gi|257257262|gb|ACDX02000001.1| GENE 26 29774 - 31744 2009 656 aa, chain - ## HITS:1 COG:alr7304_2 KEGG:ns NR:ns ## COG: alr7304_2 COG2931 # Protein_GI_number: 17233320 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: RTX toxins and related Ca2+-binding proteins # Organism: Nostoc sp. PCC 7120 # 15 580 486 1050 1125 334 46.0 3e-91 MADTLLSLKNNQSVVITGTDRNDTLYGSTGHTIFYGGLGNDTYYSKNAGDTIIERENEGR DLIYSSTDFTLPEHVEDLELQGNSMLGIGNDADNVIWGNSNGNRLYGKGGNDLMLSGNGN DYLWGDDGDDRLDGLGGNDVLNGGSGNDFLSGHDGEDILYGGTGMDTMLGGKGNDTFYVD NVKDTVVEDADAGYDTIYSSVTYTLPNHVEKLILEGKDNIFGFGNNADNSLIGNSGNNRL SGGRGSDTLYGMEGNDLLMGGDDRDELYGGQGDDILRGDAGNDLLDGGYGNDTLDGGSGA DTMAGGLGNDVYHVDNVNDTVIEETNGGIDTIYSSVTYTAPTHVENLTLTGNDNTFAFGN NADNILTGNSGNNRLSGGRGSDTLYGNEGNDLLMGGDGNDHLYGGNGADTMRGDDGHDNY YVDNINDKVIERWGEGVDTIYSSVSYTIPTYVEHLTLTGSNNTFGIGNYDDNTITGNSGH NQLNGDGGNDTLYGMSGDDLLSGGSGNDYLYGGDGDDRLNGGDGIDYLHGGDGNDYLTGG SGSDTIVTGAGKDTVAFSTSDIRYGSIDRITDFNPYMDKLDLSGMRSLLSGSEANVSWSE LFVKNPYYYDTGRSYLVFDSVSQTLAYRAAGASSNTVFAKFDDSQAAWLSASNIIG >gi|257257262|gb|ACDX02000001.1| GENE 27 32032 - 33291 1963 419 aa, chain - ## HITS:1 COG:PA4007 KEGG:ns NR:ns ## COG: PA4007 COG0014 # Protein_GI_number: 15599202 # Func_class: E Amino acid transport and metabolism # Function: Gamma-glutamyl phosphate reductase # Organism: Pseudomonas aeruginosa # 2 419 3 421 421 482 60.0 1e-136 MQNIQDYVRHTASAAKQASYTVAAAETAQKNAALLRTAELIRHHQTAILAANAQDMEQAE QKGLNDALLDRLRLSEKTIDAMCEGLRQIAVLPDPVGEMDEFRTRENGLQIGKMRVPLGV VGIIYESRPNVTVDAAALCLKSGNACVLRGGSEAFNSNMALSKLVTQALVENGLPAAAVS LIENTDRESVGAMLQSPEFIDVVIPRGGKSLVSRIAAEARVPVIKHLDGICHVYIDRAAD AEKAVNIAFNAKTSRYGTCNTMETLLVHQSRAAEILPVLAEKYAARDVELRGCPRTLSIL PHIQTASEEDWDTEYLAPILSVKIVDSLEEAVAHINTHGSHHTDSIVTESYTDARTFLRT VDSASVMVNASTRFADGFEYGLGAEIGISTDKIHVRGPVGLHGLTSQKWIVLGDGQIRS >gi|257257262|gb|ACDX02000001.1| GENE 28 33784 - 34809 1457 341 aa, chain - ## HITS:1 COG:NMB1527 KEGG:ns NR:ns ## COG: NMB1527 COG0859 # Protein_GI_number: 15677379 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Neisseria meningitidis MC58 # 1 334 1 334 336 580 78.0 1e-165 MSKKILIITPSWIGDCVMTQPLYRRLHELHPGCTIDAFAPKWSMAVFERMPEISRVIENP FGHGALELKKRWRIGRELGKQGYDQVIVLPGSLKSALIAFATGIKQRTGYVGESRYLLLN DIRKLDKAALPLMVDRYTALAHPTQADFNGHSDNPRFTISPESRAAALAKYGLDTDKPVL AFCPGAEYGPAKRWPARHFAELGSRYLAQGWQVWLFGSQKDFDIAEEINRLSDGLCTNLC GKTNLSEAIDLLSCADTVVCNDSGLMHLAAALDRKLVAAYGSSSPDHTPPLSQKAKIVSL HLECSPCFKRECPLGHTDCLNKLTPDMVQKAAEELAETESK >gi|257257262|gb|ACDX02000001.1| GENE 29 34905 - 35570 608 221 aa, chain - ## HITS:1 COG:no KEGG:PSHAa1600 NR:ns ## KEGG: PSHAa1600 # Name: not_defined # Def: cold shock DNA-binding domain-containing protein # Organism: P.haloplanktis # Pathway: not_defined # 5 220 4 203 203 103 32.0 7e-21 MRHFGTIIRWNDNRRFGAIREENMGKEIFAPLSAFTTLPHPPAEGQRVSFEIIKGRRGRD EAENICFASDCIGEADFFAPEPEPFKAAFSKLLWIIPVIALFAAGGWFGWNYWQEYRRQA QEATAAAPVTMVSEVAEKMKAERKAWKDAASGRTAFKHGSTASTGSAATTGTTTAFKCDG RQHCSQMNSLEEAEFFIKNCPNTKMDGDHDGIPCENDSRWH >gi|257257262|gb|ACDX02000001.1| GENE 30 35822 - 37438 2031 538 aa, chain - ## HITS:1 COG:NMA0954 KEGG:ns NR:ns ## COG: NMA0954 COG0665 # Protein_GI_number: 15793911 # Func_class: E Amino acid transport and metabolism # Function: Glycine/D-amino acid oxidases (deaminating) # Organism: Neisseria meningitidis Z2491 # 1 537 1 537 539 659 62.0 0 MPILAWNTLPAPAELARVIETHPAPLHLIACLSENRIPDFHLSDAPTELEGRLKNRLDQA VKCLQFNSVNFLENLLPNVHLWLVPPHRADSLHEHFDRIEWQTEAVPQAAPKSVKPWFRR PQATTPPEHALVIGAGIAGAATARKLAEHGVRVTVLEAGKAAQGGSGNRQGLLYAKISPH DTEQTELLLAGYGYTRRLLQDLLPDSDAWGGDGVLHLNFDEAERKRNQALGLQQHHVHLY RSVSADEAAQIAGIDVFSDCLYWPQGVWLNPPAVVRALLNHPLIALHEVTPLSSAEYDGA NWTANTPRGSFSASHIIYCMGAHSPNAADSNISALPFRQIRGQTGVAAASNFSERLRCAL SGESYISPSWQGQHCYGATFVLNSNDDAWHPHEETTNRTALQQLNPPLAQSLFEQNPLCS VSDDSFKQPQGHAALRCDSPDHLPIVGALGDIAAMQTAYAKLALDKNYRLDNIPCPYLPN AYINTAHGTRGLATAPVCAAAIVADILGLPQPLSQRLRTALHPNRAVIRAIVRQQPLL >gi|257257262|gb|ACDX02000001.1| GENE 31 37651 - 38547 1561 298 aa, chain - ## HITS:1 COG:NMA1017 KEGG:ns NR:ns ## COG: NMA1017 COG0061 # Protein_GI_number: 15793973 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar kinase # Organism: Neisseria meningitidis Z2491 # 3 298 1 296 296 536 87.0 1e-152 MPMNSPFHNIGIVTRPNTPEIQNTAHTLIQFLQGHGFTVYLDEIGIEERCIYVQDTVGCH IVSKSNLGKHCDLVIVLGGDGTFLSVAREIAPRTVPVIGINQGHLGFLTQIPRENMTEEL LPVLEGKYLPEERILIEATLVRDSETIHRALALNDAVLSRGGAGQMIEFEVFINQEFVYT QRSDGLIVSTPTGSTAYSLAAGGPIMQAGLHAFTLVPICPQSMTNRPIAIPDTSEIEILV TQSGDARVHFDGQSFIDVQNLDRIIIRRYHNPLRILHPTDYQYFRTLRQKLHWGEQLV >gi|257257262|gb|ACDX02000001.1| GENE 32 38563 - 39135 933 190 aa, chain - ## HITS:1 COG:NMA1018 KEGG:ns NR:ns ## COG: NMA1018 COG3165 # Protein_GI_number: 15793974 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 190 1 188 188 204 58.0 1e-52 MSALFPVINHLIQQNPEHQQDLSRLSGKTLSLNLAGFGLTGRINHDGFLETADQPADTLI TFHQSAIRKILTGQEPGVGDISLEGDLMLGMTVLPILGSLRYYASDDLARIFGDSLAGSI SERAANIGQTVKKIGQSIAEQISDFSREPESPVIDVATLSAWMEEVDKLRDDVARLNERL DRLERDIWID >gi|257257262|gb|ACDX02000001.1| GENE 33 39246 - 40040 870 264 aa, chain - ## HITS:1 COG:NMB0809 KEGG:ns NR:ns ## COG: NMB0809 COG0451 # Protein_GI_number: 15676707 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Neisseria meningitidis MC58 # 5 264 7 265 265 447 83.0 1e-125 MNTSPDASILGLGYLGRPLAQKLYEHGSRVAAIKRSLTSDDINLPIHLDTLDLNQDDVFQ SANLARDTSFWQHHADKSVWFCLLPPSSLTRYADTVKQWAELARACNVQHLIFTSSTSVY GDKARECDETSAPDPQTESARQILAAEQYLLDSGVPNIDILRLGGLYCTERHPVSRLVQK QNIQGGNRPVNIVHRDIAVETLFQTTLHPNGRRIRNIVEPRHPTRRDFYTAEAAKLGLPP PDFAPDGTGGGKIVNTVSADGLSL >gi|257257262|gb|ACDX02000001.1| GENE 34 40053 - 41192 1047 379 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261363648|ref|ZP_05976531.1| ## NR: gi|261363648|ref|ZP_05976531.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 379 1 379 379 762 100.0 0 MTRQVFILGDQPLPEGSSKPYALLTANPTKEHHYIAQTEQRQHAHNPQVSPQNQNVYRLP LSLFGTHPHQPHDERKKRKHAAKPAAPPEAASVNIIGNLAAKNLYTLTFVENTGNQYNLE SWFNRHESGYEDACEHLRTLPGCRLKTSEASFAKTSKAGLDKTDSVKVPDALWRVLRLKF LGILRNPRNHQNPFAYRLLQVLRSRLPEAGFEFVSLISRRDPKRIESIMQDFHFSFLGYV NWLSGLYGMLSEGVSQPSLFERLFCAVFAEPQAVKIELFRYPDDTGLCLFGDSGFCLQAS SELISIGVNISHDMFAVVHLQAARWHDFKNTFHHDAPKLQGKVKIIDGDQTQRVMFNRLC IRQSHEAVFGRSPNVKDYI >gi|257257262|gb|ACDX02000001.1| GENE 35 41541 - 42290 955 249 aa, chain - ## HITS:1 COG:NMA0444 KEGG:ns NR:ns ## COG: NMA0444 COG0491 # Protein_GI_number: 15793448 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Neisseria meningitidis Z2491 # 1 249 1 249 250 419 79.0 1e-117 MNITPVKALNDNYIWMIQDGNHAACVDPSDATPVLVFLVRNRLMLAQTWITHLHHDHIGG VQSLKNGFMESPVYGEADIDLATHTVTAGTQFPFGDGLVTVWATPGHTDRHVSYLLENAE GLHVFCGDTLFSAGCGRVFTGTIEDLYDSFQRFNQLPEKTLFYPAHEYTAANLRFAEFIE PENPDIQAALRAAEHTPTLPVTLAHERKINPFLRVDLPHVRERVEDLVGKQLDSGLEVFA ALRELKNRF >gi|257257262|gb|ACDX02000001.1| GENE 36 42424 - 43416 1023 330 aa, chain - ## HITS:1 COG:NMA1185 KEGG:ns NR:ns ## COG: NMA1185 COG3547 # Protein_GI_number: 15794129 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Neisseria meningitidis Z2491 # 16 330 6 318 318 538 91.0 1e-153 MQGRFMMSTQHNYAGIDIAKRNFVIAVSSLSKTKTKTETNNPKGIAHTIEYLKKHNVALV VMESTGGLEIPAAKAIHRSGIAVIIANPRQTHQFAQSQSLTKTDAKDAKMLAFFAQMTAQ KEGWQTMLYQPPTEAEEVLEALVNRRNQLVDMRTAEKNRLHQVHETQVESVKQLIAHFDR LIDELDKQIDDHTHTHFDGKAKVAKQIKGIGSTTTATLMAMLPELGRLSHKRLASLVGIA PHPRESGETKFKSRCFGGRSAVRKALYMATVVATRFEPLIRDFYQRLLSKGKPYKVAVTA CMRKLLTILNARMRDYFTENGTTENGIQTA >gi|257257262|gb|ACDX02000001.1| GENE 37 43613 - 43807 170 64 aa, chain + ## HITS:1 COG:no KEGG:azo1321 NR:ns ## KEGG: azo1321 # Name: not_defined # Def: hypothetical protein # Organism: Azoarcus_BH72 # Pathway: not_defined # 1 63 1 70 232 89 67.0 5e-17 MAKFLNTSGTTYYLEELIKNAQERLYLISPYLKLNDRVKELLEDKDRMKIDVQIVMENIN YLKL >gi|257257262|gb|ACDX02000001.1| GENE 38 44700 - 45137 450 145 aa, chain + ## HITS:1 COG:no KEGG:Neut_1890 NR:ns ## KEGG: Neut_1890 # Name: not_defined # Def: hypothetical protein # Organism: N.eutropha # Pathway: not_defined # 1 122 112 231 231 100 48.0 1e-20 MGILLKRSEDGEVYQDAYSEAQRIIRISDEVKISVDVVEKEQVSQKSQDTEIAKKYDTLT VAKLAEKWGVTTEECNAKLCHAGLQEIDGKFYRLTDTGKKAGALIKKGRYGYFIVWPDSL TLEMVEAAGNNQKDLLDRFISWLIS >gi|257257262|gb|ACDX02000001.1| GENE 39 45229 - 46281 1261 350 aa, chain + ## HITS:1 COG:RSc1174 KEGG:ns NR:ns ## COG: RSc1174 COG4174 # Protein_GI_number: 17545893 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Ralstonia solanacearum # 1 348 1 348 351 431 66.0 1e-121 MYRYILHRLLLLIPTLLGILAITFAVIQFVPGGPVEQMVQQLTHGAVSGETVNATAGNIM KNGNRISPEDLAALNALYGFDKPPLTRFADMVWRFARFDLGKSFFHHETVFELVKQKMPV SMSLGLWTFFLTYLICIPLGIAKAVRDGSRFDAVTGMVVLVGYTIPPFVLGLVLLVLFGG GSFFAWFPQGGLVGDDFDTLSWAGKIKDYLWHMALPITASVAGSLAVTTVLTKNVFLEEI RRQYVYTARAKGLPEKQILWKHVFRNAMIPLITGFPAAFIGAFFTGSLLIETLFSLDGLG LLSYEAVMKRDYPVVMGTLYVFTLMGLLAKLVSDISYSWVDPRIHFGGQK >gi|257257262|gb|ACDX02000001.1| GENE 40 46317 - 46493 135 58 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|288575220|ref|ZP_05976537.2| ## NR: gi|288575220|ref|ZP_05976537.2| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 58 5 62 62 78 100.0 2e-13 MIKCLKDISEESREHKNDGAKVVRMELQDDEATKRLVMHSAKRVIAAHKSELEKLAYK >gi|257257262|gb|ACDX02000001.1| GENE 41 46537 - 47559 1026 340 aa, chain + ## HITS:1 COG:RSc1175 KEGG:ns NR:ns ## COG: RSc1175 COG4239 # Protein_GI_number: 17545894 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Ralstonia solanacearum # 4 337 22 358 374 384 59.0 1e-106 MKTHTSNPTWQAFKQHKRGWFALRVLAVLFAVALLAPLWSNDKPLWIRYQGEYYFPLVNE YNETVFGGDFDTPADYLDPLIRGNITSNGNYAVYLPNPYDADTLNDFDTQPDPASPSERH LLGTDDRGRDVLARLVYGFRDSLLFALALTLVTTVIGVITGAVQGYFGGKTDLLMQRFIE IWGGMPELYLLIILSSFFNPSLLILLVLLSLFGWMGLSDYVRAEFLKNRQADYVLAARSM GVGNRAIMWRHILPNSLTPVLAFLPFRISGAVLALTSLDFLGLGVPASQASLGELLAQGK DNLDAWWIGLSTVGTLTIMLLLLVMIGEGLRQAFDVRARG >gi|257257262|gb|ACDX02000001.1| GENE 42 47667 - 49208 1857 513 aa, chain + ## HITS:1 COG:NMA1482 KEGG:ns NR:ns ## COG: NMA1482 COG0318 # Protein_GI_number: 15794382 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Neisseria meningitidis Z2491 # 1 511 1 513 517 873 84.0 0 MNQTHNTNFYEMLTAACRKNGKGTAVFNDKEKTTYHALKREVDAVAAYLQNMGVKFGDKV ALAVSNSPEFISAYFAVSAIGAVAVPMNTFLKNNEYAYILNDCKARFMFASAGLQKELKG LKKQTRVEKIIWIGEAKAADEADVRFEEARRFSGTPDLSRQPKINDLAHIIYTSGTTGHP KGALISYGNLFSNLEGIERIFKITKRDRFVVFLPMFHSFTLTAMVLLPIYMACSIILVKS VFPFSNVLKQVLFKRATVFLGVPAIYTAMSKAKIPWYFRWFNRVRLFISGGAPLAEQTIL DFKAKFPRAKLLEGYGLSECSPVVAVNTPERQKARSVGIALPGLEVKAVNDELVEVPTGE VGELIVKGGSVMQGYLNMRDATDEAIVNGWLKTGDFVTIDEDGFIFIVDRKKDLIISKGQ NVYPREIEEAIYKLDAVEAAAVIGVKDQYADEEIIAFIQLKDGETLDEADVRAHLRGHLA NFKIPKQIYFKDELPKNATGKVLKRVLKEQFQR >gi|257257262|gb|ACDX02000001.1| GENE 43 49400 - 50947 299 515 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 292 501 16 230 245 119 34 9e-26 MTKPILEIENLNAFFPGKQVLHDVSLTVQTGRKLALVGESGSGKTVLAQGIMRLNPLVSF EGRLKFDGNDLLTQSERALQKLRGREIGMVFQEPMTALNPVMRVGAQIAEVLTLHLGLDK KQAWARAVELLAETGIREPEQKAFAYPFQLSGGQRQRAMIAMAVAAEPKLLIADEPTTAL DVAVQAQILDLLARLQQAHNMTMLYITHDLNLVRRFADDVAVMRGGRIVETGAAAEVFAR PQHEYTQMLLNAGAARKVVPLADNPATVLQAEQISVAVKETAGWFKKRSKTLLEPVSFDL KAGETLGIIGESGCGKTTLAKAVMHLIDAEGRLKINGEAWTRESRRDIQMVFQDPFGAFN PRMNVFNIVSEALRVHEPDLSRSEMRQRVQDVLRQVGLPEDALERYPHAFSGGQRQRLAI ARAIIVRPKILVLDEPTSALDVQWQQQILELLADLQKKHGLSLIIISHDLAVIRALSHRV MVLKDGKIVEEGDCETVFANPSSDYTRHLMSFRAG >gi|257257262|gb|ACDX02000001.1| GENE 44 51098 - 51430 537 110 aa, chain + ## HITS:1 COG:NMA1578 KEGG:ns NR:ns ## COG: NMA1578 COG0526 # Protein_GI_number: 15794471 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Neisseria meningitidis Z2491 # 1 110 1 110 110 202 90.0 1e-52 MSSELIIHTSDANFEQDVLKSDVPVLLDFWAPWCGPCKMIAPILDDIAAEFEGRLKVVKI NIDDNEATPAKFGVRGIPTLMVFKNGENVATKVGALAKGQLTAFVNASLA >gi|257257262|gb|ACDX02000001.1| GENE 45 51521 - 53539 3157 672 aa, chain + ## HITS:1 COG:NMB1331 KEGG:ns NR:ns ## COG: NMB1331 COG0556 # Protein_GI_number: 15677197 # Func_class: L Replication, recombination and repair # Function: Helicase subunit of the DNA excision repair complex # Organism: Neisseria meningitidis MC58 # 1 671 1 671 675 1277 98.0 0 MEVIQYPNSPFKLHQPFPPAGDQPTAIAGLLEGLSDGLAYQTLLGVTGSGKTYTMANVIA QSGRPAIIMAHNKTLAAQLYAEMREFFPENAVEYFVSYYDYYQPEAYVPSRDLFIEKDSA INEHIEQMRLSATKNLMTRDDVIIVATVSAIYGIGDPTEYQQMVLSVKEGDTIEQRDIIA TLVSMQYERGDLDFKRGSFRVRGDVIDVYPAESSENALRISLFDDEIDRLDMFDPLSGSL HQRVGRYTVFPSSHYVTPRDTVLRACESIKEELRERIEFFAREQRPVEQQRIEQRTRFDL EMLYEMGFCKGIENYSRHFSGKKEGEPPPTLMDYLPDNAIMFIDESHVTVTQIGGMYKGD ASRKQNLVDYGFRLPSARDNRPLKFHEFEKVMPQTVFVSATPAKYEEEHAGQVVEQVVRP TGLVDPQIIIRPVATQVDDLMSEINDRIQKGERVLVTTLTKRMAEQLTDYYSELGIKVRY LHSDIDTVERVEIIRDLRLGLFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSHRSL IQTIGRAARNVNGVAILYADKITDSMKAAIDETERRREKQIKFNEEHGIVPQQIKKQVKD IIDGVYHEEDSGKGRLKGKNKVKVGEIHNEEDAIKEIAKLEKAMQQAARDLQFEEAAVLR DRIRGIKENLFS >gi|257257262|gb|ACDX02000001.1| GENE 46 53618 - 53860 130 80 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|288575221|ref|ZP_06393568.1| ## NR: gi|288575221|ref|ZP_06393568.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 80 1 80 80 133 100.0 4e-30 MFDQNKNSQNSSLCDESSMPTIFVTGIEFVEDSKQKVAIIRFLDNLNKDKVICSVALTPY IIEKFQENISRFLTSIQNDS >gi|257257262|gb|ACDX02000001.1| GENE 47 53850 - 54524 238 224 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|288575222|ref|ZP_06393569.1| ## NR: gi|288575222|ref|ZP_06393569.1| hypothetical protein NEIMUCOT_03562 [Neisseria mucosa ATCC 25996] hypothetical protein NEIMUCOT_03562 [Neisseria mucosa ATCC 25996] # 1 224 1 224 224 404 100.0 1e-111 MTVDGLRYLNMIDSLVFSNDYVKPSGGIAQIHVVPKSIGNFKYNISEITNTKSRLDNYYQ KIYAASRKLTEELIDGFKEFNKEPPIYHYISILKGILDQENKKYKEYNVFAETGFPRKLL SEIQSLLNTQPNYEFNIDSIVNLNYFIFSKNLNNDTKIIFDFGKVVLLLNKPNFDITIIF EENGSLNYHLTNKHGNRRMNGSYELDFEYLANFDDLFLWFERDR >gi|257257262|gb|ACDX02000001.1| GENE 48 54530 - 55024 106 164 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261363662|ref|ZP_05976545.1| ## NR: gi|261363662|ref|ZP_05976545.1| hypothetical protein NEIMUCOT_03563 [Neisseria mucosa ATCC 25996] hypothetical protein NEIMUCOT_03563 [Neisseria mucosa ATCC 25996] # 1 164 1 164 164 335 100.0 6e-91 MTSEQILWRYAGASRMPHAFLCDEYYDKAFLPRAKIEENKLSLLSNSPDLYLNKYVEEKK LYALEIINLLESKGINCGPQGHLISMNKDLFIKSLGGTNKRVRHIKLVDIYQDNIIENPQ HFCFEYLGCKTLDDVKNHPARPQILAALIKACEDIPISVLSVQS >gi|257257262|gb|ACDX02000001.1| GENE 49 55185 - 56504 1587 439 aa, chain - ## HITS:1 COG:BS_yceI KEGG:ns NR:ns ## COG: BS_yceI COG0477 # Protein_GI_number: 16077364 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Bacillus subtilis # 18 435 11 400 400 318 47.0 1e-86 MDILSRLQALPPGRFHYKLLVLVGIGWLFDAMDTGIVSFILPALGKEWGLQPAQLGWIVS IAFIGMALGAVASGWLADRFGRKTVFAATMAVYSTATGLCAFAPDIATLLICRFFVGVGL GGQLPVAVSLVSEYAPPKVRGRFIVLLESFWGLGWLAAALASYFFIPKFGWHSAFLIGAL PILYIPLVLKFIPESVPYLLSQGKTDEAHRLVSRLENEAGITPAATAIAPPQQQKQRIRF MQLWQQPFARRTLMLWLVWFGIVFSYYGIFTWLPKLLVEQGNTVVKTFEYVLVMIVAQLP GYIAAAALVEKIGRKATLAGFLAACAVCAWFFGQSSSAAEVMAWGSLMSFFNLGAWGVLY TYTPELYPLRFRAFASGWAGAIGRIGGILAPMVVAKMVGGSGGFGNIFMMFTGVMMLIVL VILALGEETKGRTLEEISS >gi|257257262|gb|ACDX02000001.1| GENE 50 56845 - 57690 243 281 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 24 243 28 259 563 98 28 3e-19 MQPEHTPLIEFKNVSKRYDNHAAVNELNLTIYQGEFFVLVGGSGSGKSTTLRMINALTEP TDGNVYFNGRRIKDYDIRGLRHRIGYVLQQIALFPTMTVRQNIELMPDILGWDKPKRTSR VNELLELVGMPPETYLNRYPHELSGGEQQRIGILRAIAAKPDILLMDEPFSALDPLARAS LQETVSLIHKKLGTTIVFVTHDMSEAAKLACRIGVMHQGRLVQVDTPQDIQNHPADDYVR SLFGAAQPENTASTDEVINLYRSLDADGKARVREHWAKEEN >gi|257257262|gb|ACDX02000001.1| GENE 51 57828 - 58373 655 181 aa, chain - ## HITS:1 COG:no KEGG:ESA_02188 NR:ns ## KEGG: ESA_02188 # Name: not_defined # Def: hypothetical protein # Organism: E.sakazakii # Pathway: not_defined # 5 180 7 183 398 129 41.0 4e-29 MPQPDWQYIENIAYQIIVDAVHHIHRQHPRQTVYAAIFHNFYCDNAHLYFPSLSVGTEEL LTRVVEKYQSEYGSAESRSELEQSLRWSGADLAEYLFDSGAAGNAAAQSVQAAVCQETDW DDLYDRFRQCFPRACRRATEDLLRAKLVAPDFIAVACDEDEELIAPSLTPEQLQRHFPEF V >gi|257257262|gb|ACDX02000001.1| GENE 52 58748 - 59203 468 151 aa, chain - ## HITS:1 COG:VCA0151 KEGG:ns NR:ns ## COG: VCA0151 COG4097 # Protein_GI_number: 15600921 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted ferric reductase # Organism: Vibrio cholerae # 1 151 293 450 450 94 33.0 7e-20 MIKDLGDYTHRLPQRLNIGDTVQIDGAYGRFDFSDKQAQIWVSNGIGFTPFLARLNELAK QPATQPIDWFHADRNLPAETLAHWQNLAQQANVNFHYIPSETQRLTAEHISQTVRDSANR SLWLCGSRSCTRSISDNLKTRSQHMEFFEFR >gi|257257262|gb|ACDX02000001.1| GENE 53 59223 - 59822 618 199 aa, chain - ## HITS:1 COG:VCA0151 KEGG:ns NR:ns ## COG: VCA0151 COG4097 # Protein_GI_number: 15600921 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted ferric reductase # Organism: Vibrio cholerae # 2 189 82 276 450 110 35.0 2e-24 MYRLHKWFGIIALSGSILHWTTKQFPKWLVKLGLFDGKKPPRPPMQEILTLKDWLATQRH FAEEVGEIAFYVAIVLLVAALIKRIPYRWFAKLHILVVPVYLALVWHTIVLVNFSYWSQP LGWLIIAALLAGIACSLIALFKRIGKPQNATVSALNQNGKLLSLTLNAPKWQGHRAGQFL FITHTRRKPPLYHRLRLAA >gi|257257262|gb|ACDX02000001.1| GENE 54 59865 - 60284 356 139 aa, chain + ## HITS:1 COG:no KEGG:Aasi_1471 NR:ns ## KEGG: Aasi_1471 # Name: not_defined # Def: hypothetical protein # Organism: A.asiaticus # Pathway: not_defined # 1 129 13 147 157 97 45.0 1e-19 MKYENLIQRSDREFKRLTGVTPVLFHEMLQITTEAESRKVKSGRPHTLSLADQLLLTLSY LRHYHTQLELAAIYGLSESNVCRTIRKTEDALIRCKRFSLPKHKNPGDHTVLIDVTESPI ERPKKTAAVLQRQEKAAHG >gi|257257262|gb|ACDX02000001.1| GENE 55 60339 - 60659 431 106 aa, chain + ## HITS:1 COG:SP1928 KEGG:ns NR:ns ## COG: SP1928 COG3293 # Protein_GI_number: 15901752 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 5 103 24 124 129 81 47.0 3e-16 MGAQHDMRLARRHLTELYPYKIVIADKGYQGLAKTGLQTPKKKSKHHLLNKQDKEANRRL GKLRTVIEHINRKLKIFKILSLPYRNRRKRFGLRANLIAGLINAMG >gi|257257262|gb|ACDX02000001.1| GENE 56 60646 - 61458 275 270 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261363669|ref|ZP_05976552.1| ## NR: gi|261363669|ref|ZP_05976552.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 270 1 270 270 441 100.0 1e-122 MQWDEYFRKRSIVKVENESLKNQISLFEDKIQLLQKGLEQTQSESNSRGNQEEIDKLQKQ IKQIEEEKNQSLEDLKKSLKLQWRNQIQYARNSLAHALKNTDNQIKNNENTACWFKRLGI ALFIITIILLLIFSIFVLCAPDSFLTQNFNILFYTFPIITLMLIGTTCLRHQKNLLGEVR HFSNMKHQIELCSGLLEASQHAAASFNNPEKADEYVQETFTQIRNRLLNSQYLPDNSSAD KQSDNDFGSDKVLDLLNKIADLSGKKSMGN >gi|257257262|gb|ACDX02000001.1| GENE 57 61942 - 65271 3738 1109 aa, chain - ## HITS:1 COG:PA5114 KEGG:ns NR:ns ## COG: PA5114 COG5373 # Protein_GI_number: 15600307 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Pseudomonas aeruginosa # 218 697 174 651 1201 306 43.0 2e-82 MQYFCLLIPILIGYFLDEMAVGVIFGSILWLFARELGKPRQEERDAKLQNLEKEIELLKQ RLTALEHESVHDKAEVGQARKLRAVLSEHADDIQTTSAPLHEKVEPLATADNAPVEPHIE PVVAPSFSTPVSPVSAEPSVQPEPALHADSVETPAQVAAIQEVELEQDAPALLTSSENEV PMSSENTSLENADADSRETVIHKEEGFDFKFSENPIVAWFLRGNPLLKTGIVVLFLGLAF LLRYASERIHVPVEMRYLTVAGAGLAAVVGGWKLQSRKREYGLVLQGFGVAVMYLTSLAA LKLHPLLPAPIVFVLMVAMVVLMALLAIRQNAQIMAQVALVGGLAAPILTSDGSGNYLVL FSYLSLLNAGVAAIAWFKAWRPLNLTGFAGTFSIAALWGMQSYTPQHFATTEPFLIYHWL LYTFIAYLFARRKLTENREDTLAPVADNATLEEIWNSLCSHGLRVHVLDHTLLFGTMAAA FGLQYRMVEHWPSADAFSALGFAAVYGLAALMLKRQQGLYILRQAFFALSLLFLTLAVPL YFERGNTVILWTVESALVYFFGLRQQRPHMRLGALVVYLLAALIQLSGYQPGETTILQGQ WFTTLLTLFGGAAIYLQWHLYHRKGSAQWEQTLQDAALCAALFYTSILPLLFFAERGSII VFSALVAAWAFCRSKGKSDVFSTFALGNAIFILFFQASINDEPYGLLTHWHLFAAAPLLF AAAYALQYSRVQTEASGNQDKQDQPLPFSRIAGWAILVIALMLGGFATYTQWTGEETLFI ELWALPIFTTLLLLANRLNWKELFQTTLAFMPLFALHFIGYHLEHLWTAAAALPLAAATV LNFVILNNRQTHAPIDLHKLNIIMLGILWSLWSGMYVGERLDGVWSQLSWLAVPLIMWVV FHTQRQRGFFRRHQAAYQHFALPIAALAAASWMIWTNFSTPFQPAPLPYIPLLNPLELAC AGMLWFALMSLPEALPLEYRRVNAPGVAALAFMVISAGVMRLWHFYDGITWRLDIMLQSF GLQASLSVVWAVTAIILMVYGNRRKLRPFWITGAALMAIVVVKLFLIELSNSGGIARIAS FIIVGVLLLLVGWFAPVPPKVVENEEDKA >gi|257257262|gb|ACDX02000001.1| GENE 58 65441 - 66898 1141 485 aa, chain - ## HITS:1 COG:NMB0661_2 KEGG:ns NR:ns ## COG: NMB0661_2 COG0168 # Protein_GI_number: 15677999 # Func_class: P Inorganic ion transport and metabolism # Function: Trk-type K+ transport systems, membrane components # Organism: Neisseria meningitidis MC58 # 3 485 1 483 483 635 73.0 0 MYKFLPIVHVLSRLGLLFSMLLAVPTLMSYFFLDNAFPAFAYTALATTLTSCAVWLMTFH FRRELRPRDGFTLVLMLWLAFALVAAMPIYIHIPGISFTDAFFEAMSGLTTTGATVMTSL DTLAPSINFWRHMLNWLGGMGIIVLAVAILPMLGVGGTQLFKAEIPGMDKESKMAPRISQ VAKKLWFFYTMTTTAAFLTLHFAGMSWFDALCHAMSAVSLGGFSTHDASIAYFDSLTVEW AIMFFTLWGGINFATHFTALTRRSLKSYWRDEECRVLLSLLAVSILMSAVYLWQKDFYAT FGDSLRFVSFNFVSIGLASGFSNTDFAQWPLIVSLWMFFLSNLLASSGSMGGGIKNVRAL VLFKFSLREMMILLHPRAVRTVKVNGRMIPDRMALTVMAFISIYFMTTIVFSFFLMASGM EFISAFTAVIACITNAGPGLGEVGPASSYAVLSDVQKWLCSAVMLLGRLEIFTVLILLTP AYWKK >gi|257257262|gb|ACDX02000001.1| GENE 59 67150 - 68784 2382 544 aa, chain + ## HITS:1 COG:NMA1742 KEGG:ns NR:ns ## COG: NMA1742 COG0504 # Protein_GI_number: 15794635 # Func_class: F Nucleotide transport and metabolism # Function: CTP synthase (UTP-ammonia lyase) # Organism: Neisseria meningitidis Z2491 # 1 544 1 544 544 1088 98.0 0 MTKFIFVTGGVVSSLGKGIAAASIATILESRGLNVTMLKLDPYINVDPGTMSPFQHGEVF VTDDGAETDLDLGHYERFINATMTRRNSFSTGQVYENVIAKERRGDYLGGTVQVIPHITD EIKRRIHEGAAGYDVAIVEIGGTVGDIESLPFLEAIRQMRSQLGRNNTLFAHLSYVPYIA AAGEIKTKPTQHTVKEMLSIGLQPDILICRMDREMPADERRKIALFCNVEERAIVGSYDV DSIYECPEMLHDQGIDNIITEQLQLNVQQADLTAWKKIVHAIKNPKHTVKIAMVGKYVDL TESYKSLIEALKHAGIHTETDVQITFVDSENIEKNNGDVSMLKDMDAILVPGGFGSRGVE GKIAAVRYARENNVPYLGICLGMQIALIEYARDVAGLKGANSTEFDLKCAAPVVALIDEW QTADGSVETRDESADLGGTMRLGAQEVELKAGSLAAKIYGSEHIRERHRHRYEVNNNYVP TLEQAGLVIGGVSAGRERLVETIELPNHPWFFACQFHPEFTSNPRKGHPLFTAFVKAALN NKKG >gi|257257262|gb|ACDX02000001.1| GENE 60 69229 - 70350 1536 373 aa, chain + ## HITS:1 COG:NMB2039 KEGG:ns NR:ns ## COG: NMB2039 COG3203 # Protein_GI_number: 15677862 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Neisseria meningitidis MC58 # 1 373 1 331 331 210 38.0 3e-54 MKKAIIALTIAALPFAASAEVVLYGQVKSSITSGQVKIKGNEGTEKSATATRINDNTSRI GFKGSEKLSDDLKVIWQIEQRTSILGEANSQRFGNRNSFIGLEGKFGKVRAGNIDNMLNE MDTIDPWMYKTDAMGLGINTRTGVRTPSLRYDSPSFGGFKFNASYAPRDNRNPDDKYVHE KPSKEQYTAGLIYENNGFATKLGYGHYKGAYTDNNGKTKAAQIAKIESYYDKDNLFVGVG AQYAKGHESANKYLAHFTDDFNTYKGVDITKDSGKEEAVKVVDAAVTVGYTFGNVTPQIS YAHGWAAKGVNSGEKLVDKFDQVVVGAKYKFSKRTSMLAHAGYMKLGKNTRLTPTQIGSV EQKAVSLGLAHKF >gi|257257262|gb|ACDX02000001.1| GENE 61 70443 - 71171 977 242 aa, chain - ## HITS:1 COG:NMA1059 KEGG:ns NR:ns ## COG: NMA1059 COG3471 # Protein_GI_number: 15794008 # Func_class: S Function unknown # Function: Predicted periplasmic/secreted protein # Organism: Neisseria meningitidis Z2491 # 1 241 1 233 234 213 51.0 4e-55 MLRPILAALVLATALPAAAETDTLHYNMVEFAESANLEITRDTMTAHFSINAEGKDRATV NKAFQKKFNDFNKAVQNNKLQAELLSRSASPRHEYNNGKRIQTGWEEVASFKVESKDFDA INRLTDETLQSATLNHIGFSISKEKREAAVDQVSKAAILRFKDRAQDLAKTLGFSNYKIV KLNLGHIGNRSIDDRLGFARAKMMSAETAFARSSASDENNAIQAPSPGSEEISITVNGLV QM >gi|257257262|gb|ACDX02000001.1| GENE 62 71415 - 72827 1977 470 aa, chain - ## HITS:1 COG:NMA1813 KEGG:ns NR:ns ## COG: NMA1813 COG0569 # Protein_GI_number: 15794703 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transport systems, NAD-binding component # Organism: Neisseria meningitidis Z2491 # 1 470 1 470 470 763 81.0 0 MKILILGSGQVGSTVAQNLASVSSNDVTVIDIDEKALQHIGSRLDVQTILGNGASPFILE QAGAADSDLLLALTRSDETNIVACKIAADLFNIPSRIARVRSSEYLEYPYPENDDTENGS LTVFDITETISPEQLVTEQLVGLLSYTSALQVLRFADDKVRMIIVQARKGGLLVNREIAD INQHLPEGVDCQICAIYRNNRLIVPTPQTVIIEGDEVLFAADTNSVNTIMRELRPKEART RRIMIAGGGNIGYRLAKQLESKYDIKIVEYNPRRAEWLAENLDNTLVLQGNATDETLLDE EYIDEIDVFCALTNDDENNIMSSLLAKNLGAKRVVTIVNRSSYVDLLEGNKIDIVVSPHL ITIGSILAHIRRGDIVAVHPLRRGTAEAIEVVVHGDKNTSAIVGRRISGIKWPGDCYIAA IVRAETGEVIMGHHTDVLVQDGDHIIFFVSRRRVLPELEKLIQVKMGFFG >gi|257257262|gb|ACDX02000001.1| GENE 63 72928 - 74379 2307 483 aa, chain - ## HITS:1 COG:NMB0470 KEGG:ns NR:ns ## COG: NMB0470 COG0471 # Protein_GI_number: 15676381 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Neisseria meningitidis MC58 # 1 483 4 488 488 515 64.0 1e-146 MGFKPIPAAVALALTLIIWFVIPVPQGVSPDAWHLLALFVGIIAGIIGKAMPIGAMAILG ITLVALTGVTNEKAADATKDALSSLNNSLIWMIGIAIIISRGLLKTGLGMRIGYLLISLF GKRTLGVGYSLALADLVIGPVTPSNTARGGAIVHPIMRSIALSFDSDPEKGTEGKIGKYL ALVNYHANIITCCIFITATAPNPLVVELVAKATNSEIHLSWGTWFAAMVVPGLIAMFLMP LVLYFLYPPEIKQTPNATALAKEKLKEMGAMKRDEKIMLGIFVILLLLWAGVPEMLFGVK VDATATTFLGLSLCLLTGVLTWDDALKEKGAWDTIVWFAALVMMANFLNKLGLIAWLSES MQGGISHLGLGWEAGCALLTLAYLYAHYVFASGTAHVTAMFGAFYGAGLALGAPPMLFAL IMASATGIMMSLTHYASGSSPVIYGSNYVSMTEWWKAGFIMSVVEILIFGTIGIIWWKVL GYW >gi|257257262|gb|ACDX02000001.1| GENE 64 74896 - 76149 1645 417 aa, chain - ## HITS:1 COG:STM2324 KEGG:ns NR:ns ## COG: STM2324 COG1894 # Protein_GI_number: 16765651 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit # Organism: Salmonella typhimurium LT2 # 19 410 26 419 445 290 42.0 4e-78 MNQANQNLLHPSRQVGADLAAWRKVGGGEGLLAALADPQSIVSKLQDANLCGMGGAGFPT WRKWEAAVAAQSKHGDKYVVCNANEDEPGTFKDRVLLAKTPHQVIEGVLIAAVACRANKA IMYVNPHQTESVASIVPAIEQWKKSDLFIRIENYLGKPLDLKLVETSGRYIGGEETAVIS WLEGGFPFPRRKPPFPAESGVAGEPTLINNTETFANIPQILAKGAEWYKSLGLGDAAGTK LYSLSGDVLNPGLYELPMGTTLQSLIFDHGGGMLEGRTFKAVFTGGPSNTLLTVKDLDVP LDFVSVRERKSSLGTGAMIVISEGTSVVRKVAEYVEFFASNSCGQCPPCKGGTFQLSRLL NRVDTGIGTSDDLRALQSLCQLLPRSGRCGLIDGAVTVLQSSLRTFPEEYGLPAEQD >gi|257257262|gb|ACDX02000001.1| GENE 65 76146 - 77774 2530 542 aa, chain - ## HITS:1 COG:MK0828 KEGG:ns NR:ns ## COG: MK0828 COG1053 # Protein_GI_number: 20094264 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Methanopyrus kandleri AV19 # 83 491 2 409 556 250 42.0 5e-66 MAKKIEGIDYETALANLRASSLELRGDLPEKNELLIQFHPDYQANARVKLPIGPNTGDYC HPDLAKLLISHPLIDDYDLSGAEHLNTDVLVIGGGGAGAAAALSATEAGARVIMANKLRI GDSNTVMAEGGIQAAVGAEDSLQQHFDDTIKGGHNAGKKELVAQMVTDAPSAIRWLIGLG MTFDLAKGADSNGMLSRKRAGGTTVPRILSYRDFTGLEMMRVLREAVELDENITQLNRHP AIELLSDEHGRCVGAILYDLEKRSLVLVHAKAVVLATGGSGRLHLQGFATSNHYGATADG LVMAYRIGAKLRDIDSFQYHPTGVAHPPHLAGALISEAVRSAGTKLVNGLGERFVDELQP RDVVAAAILRECREGRGVVRDGQVGVFLDTPRLIENDPDVLNRLVTLGHVAHKCGIDPAV EPVMIHPTLHYQNGGVEINGDGATCVEGLYCAGEVTGGIHGRNRLMGNALLDIISFGRRA GKAAANCGLPLKKVRGGVGHVHDLQREMTRAGLTSDIKAPVLYPDYGKFDLREHAGLQEQ QS >gi|257257262|gb|ACDX02000001.1| GENE 66 77774 - 78412 803 212 aa, chain - ## HITS:1 COG:no KEGG:NLA_6600 NR:ns ## KEGG: NLA_6600 # Name: not_defined # Def: ferredoxin family protein # Organism: N.lactamica # Pathway: not_defined # 1 212 1 212 212 415 96.0 1e-115 MSENLLTLTIDGHEVKASADSSIIQAYARAGSAITANVGCMGQGVCGSCRCMIRKEGERE VTTALACETKVEEGMQVSFLDYFIPEHIQYYDVSEVGDGWNWLDDTAKAFPEAQHCRHCG GCNRACPKGLEVENGVAQVVSGDFGAAALTFDQCVMCNLCTLSCPEHIRPNHLGLFARRM KAARTLRPVDLMRRLQEIDSGKMKVEFEEEAM >gi|257257262|gb|ACDX02000001.1| GENE 67 79237 - 80760 1829 507 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169634422|ref|YP_001708158.1| fumarate hydratase [Acinetobacter baumannii SDF] # 2 505 3 502 508 709 67 0.0 MTVIKQEDFIQSICDAFQFISYYHPKDYIDALYKAWQKEENPAAKDAMTQILVNSRMCAE NNRPICQDTGIATVFLKVGMNVQWDADMSVEEMVNEGVRRAYTWEGNTLRASVLADPAGK RQNTKDNTPAVIHMSIVPGDKVEVTCAAKGGGSENKSKLAMLNPSDNIVDWVLKTIPTMG AGWCPPGILGIGIGGTPEKAVLMAKESLMSHIDIQELQEKAASGAELSTTEALRLELFEK VNALGIGAQGLGGLTTVLDVKILDYPTHAASKPIAMIPNCAATRHVEFELDGSGPVELTP PRVEDWPDLTYSPDNGKRIDVDKLTKEEVASWKTGDVLLLNGKILTGRDAAHKRLVDMLD KGEELPVDFTNRLIYYVGPVDPVGDEVVGPAGPTTATRMDKFTRQMLEQTGLLGMIGKSE RGAATCEAIADNKAVYLMAVGGAAYLVAKAIKSSKVLAFPELGMEAVYEFEVKDMPVTVA VDSKGESIHATAPRKWQAKIGIIPVES >gi|257257262|gb|ACDX02000001.1| GENE 68 80984 - 82186 1983 400 aa, chain + ## HITS:1 COG:NMB0699 KEGG:ns NR:ns ## COG: NMB0699 COG0133 # Protein_GI_number: 15676597 # Func_class: E Amino acid transport and metabolism # Function: Tryptophan synthase beta chain # Organism: Neisseria meningitidis MC58 # 1 400 1 400 400 781 96.0 0 MKNYQAPDEKGFFGEHGGLYVSETLIPALQELADAYKAAKNDPSFWEEFHRDLKHYVGRP SPVYHAARLSEHLGGAQIWLKREDLNHTGAHKVNNTIGQALLARRMGKKRVIAETGAGQH GVASATVAARFGMTCDVYMGADDIQRQMPNVFRMKLLGANVVSVDSGSRTLKDAMNEAMR EWVARVDDTFYIIGTAAGPAPYPEMVRDFQCVIGNEAKAQMQEAIGRQPDVAVACVGGGS NAIGLFHPYIGEENVRLVGVEAGGLGVDTPDHAAPITSKAPIGVLHGFRSYLMQDENGQV LGTHSVSAGLDYPGIGPEHSHLNDIQRVEYTVAKDDEALEAFDLLCRFEGIIPALESSHA LAWAVANAPKMGKDQVILVNLSGRGDKDINTVAKLKGIEL >gi|257257262|gb|ACDX02000001.1| GENE 69 82350 - 83018 248 222 aa, chain + ## HITS:1 COG:NMB1296 KEGG:ns NR:ns ## COG: NMB1296 COG0500 # Protein_GI_number: 15677163 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Neisseria meningitidis MC58 # 1 205 1 204 221 255 60.0 6e-68 MEEWFERTMIGRYTAEREKQFFMHYLERFAPCGVQTVVRQGGEWLGSSENVVAVPHDVLM TADAMAWESHSIDVLLMPHSHETAALTQVLHEASRVLKPEGRLVLTGFNPKSLWFFSKWF DGTRLPKKEHCLTLPALKQRLVDLDFEVEFGKFMVYLPAVNSKKGLRFWRFMEKAGDRWW PQCAAVYGLVLIKRMAGVTPLPEFEKILGTQTVALGAARISD >gi|257257262|gb|ACDX02000001.1| GENE 70 83265 - 84092 736 275 aa, chain + ## HITS:1 COG:NMB1295 KEGG:ns NR:ns ## COG: NMB1295 COG0266 # Protein_GI_number: 15677162 # Func_class: L Replication, recombination and repair # Function: Formamidopyrimidine-DNA glycosylase # Organism: Neisseria meningitidis MC58 # 1 275 1 275 275 491 82.0 1e-139 MPELPEVETTLRGINPHIQGKKVADVVLRQTKLRWQVNPQLAELLAGQEVLICRRRAKYL IISFATGILLIHLGMSGSLRIFTDGDARIDHPDKHDHVDIVFADGTVLRYHDPRKFGAIL WYEGIAEHHPLLEKLGPEPLSDDFSADYLYQKLKTQKRAVKLALMDNAVVVGVGNIYANE SLFKAGISPHRPADKIKKKECVVLVETVKAVLQRAIETGGSTLRDFVNSDGKSGYFQQEY TVYGRYNEPCVRCGGLVQKEVLGQRGTFYCPNCQK >gi|257257262|gb|ACDX02000001.1| GENE 71 84194 - 84964 818 256 aa, chain + ## HITS:1 COG:NMA1504 KEGG:ns NR:ns ## COG: NMA1504 COG0204 # Protein_GI_number: 15794403 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Neisseria meningitidis Z2491 # 1 251 1 251 255 351 70.0 7e-97 MHSRKAPFFTRLGRLFRLTGWLFRTGSHLRRIDAGNPAERDHAVITLGKGALEALDIELE IGTPPSDNVNGALVAANHVSWLDIFAMSAVYPSSFIAKQEIKNWPVLGKMGQNAGTVFIN RNSRRDVEPINQAICAALKAGQNVSFFPEARTSLGLDILSFKAALFQSAIDADAPVQAVT LRYYDDAGKRTTVPSYAQVDLVRSLWRIVSMKKLRIRIDFASPIRPGKDEDRFMLKDKVE SSIREVVLSDAHDSEK >gi|257257262|gb|ACDX02000001.1| GENE 72 85153 - 85890 1158 245 aa, chain + ## HITS:1 COG:NMB0946_1 KEGG:ns NR:ns ## COG: NMB0946_1 COG0678 # Protein_GI_number: 15676839 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Neisseria meningitidis MC58 # 1 172 1 172 172 353 98.0 2e-97 MALQDRTGQKVPSVVFRTRVGDTWKDVSTDDLFKGKKVVVFSLPGAFTPTCSSSHLPRYN ELFGAFKENGVDAIYCVSVNDTFVMNAWAAEEEADNIYMIPDGNGEFTEGMGMLVGKEDL GFGKRSWRYSMLVNDGVVEKMFIEPEEPGDPFKVSDADTMLKFIAPDWKAQESVAIFTKP GCQFCAKAKKALQDKGLSYEEIVLGKDATVTSVRAITGKMTAPQVFIGGKYIGGSEDLEA YLAKN >gi|257257262|gb|ACDX02000001.1| GENE 73 86144 - 87550 333 468 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 7 461 5 451 458 132 26 1e-29 MKKIQADVVVIGGGTAGMGAFRNARLHSDNVYLIENNVFGTTCARVGCMPSKLLIAAAEA RHHALHTDPFGVHLDKDSIVVNGEEVMQRVKSERDRFVGFVVADVEEWPADKRIMGSAKF IDEHTVQIDDHTQITAKSFVIATGSRPVILPQWQSLGDRLIINDDVFSWDTLPKSVAVFG PGVIGLELGQALHRLGVKVEIFGLGGVIGGISDPVVSDEAKAVFGEELKLHLDAKTEVKL DADGNVEVHWEQDGEKGVFVAEYMLAAVGRRPNVDNIGLENINIDKDARGVPVADPLTMQ TSIPHIFIAGDASNQLPLLHEAADQGKIAGDNAGRYPNIGGGLRRSTIGVVFTSPQIGFI GLKYAQVAAQYQPDEFVIGEVSFKNQGRSRVMLVNKGHMRLYAEKATGRFIGAEILGPAA EHLAHLLAWAHQMKMTVEQMLDMPFYHPVIEEGLRTALRDADAKLKQA >gi|257257262|gb|ACDX02000001.1| GENE 74 87635 - 88579 1365 314 aa, chain - ## HITS:1 COG:NMA1783 KEGG:ns NR:ns ## COG: NMA1783 COG2207 # Protein_GI_number: 15794676 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Neisseria meningitidis Z2491 # 1 302 1 299 301 335 55.0 8e-92 MDTLDKLIELAQITGSVDIQCLFRDKWYAPHGRRRAHGIAHLVVAGESYIKIEGEPEARL LQTGDLIFFPRSAEHIISSEADCNNCGDTIHISNDGAFTIESSGSGGEKGLDLFCARFEY DEHADIMHDLPETVLIKMDHPSLQCLISMLQYESAHTLSGSRAIVNALSSVLLVLIVRAH LEQGGEAPLGGILNGLRDKRLRQLIQTVVSRPEDEWNIEKMTALANLSRAQLMRLFKQQT GISPHAFVNLIRLRQAAVLLRQTADSVLSVALNVGFQSETHFGKAFKKQYGISPGQYRKN AGISETDIEPSDDI >gi|257257262|gb|ACDX02000001.1| GENE 75 88708 - 89043 660 111 aa, chain + ## HITS:1 COG:NMA1782 KEGG:ns NR:ns ## COG: NMA1782 COG0599 # Protein_GI_number: 15794675 # Func_class: S Function unknown # Function: Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit # Organism: Neisseria meningitidis Z2491 # 1 111 1 111 111 122 90.0 1e-28 MFQNWPEHTAHVKKSFGELGKNHPKMLQAYGALEQAAAAEALDAKTRELIAIAVAITTRC ESCISVHAAAAAKAGATESEIAGALATAISLNAGAAYTYALRALEAVDAQR >gi|257257262|gb|ACDX02000001.1| GENE 76 89170 - 89535 652 121 aa, chain + ## HITS:1 COG:NMA0994 KEGG:ns NR:ns ## COG: NMA0994 COG0607 # Protein_GI_number: 15793951 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Neisseria meningitidis Z2491 # 25 121 23 119 119 137 69.0 7e-33 MKKLLTAALTAAALFLPAAVSYAAPAAKAASAQPAKAKGVWIDVRSEEEFKSGHLQGSVN IPHEQIVERIKSVSPDKNAPVNLYCRSGRRAEVALAELKKAGYTNVTNHGGYEDLLKKGL K >gi|257257262|gb|ACDX02000001.1| GENE 77 89590 - 90084 618 164 aa, chain + ## HITS:1 COG:NMA0993 KEGG:ns NR:ns ## COG: NMA0993 COG3439 # Protein_GI_number: 15793950 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 1 164 1 159 159 178 65.0 3e-45 MKPIRTFAAAAILAALTACASHSDDAARQPDSRQSSAMNQTHTAVSKYSFDDTVRRLETA VKEKGMTVFAVIDHQAAARQSGLDMQPAKVIVFGTPKAGTPLMQKDPAFALQLPLRVLVT ETEGAVQVVFNDTRALVSGSKIEFAEVENTLANAEKLIRKTVTE >gi|257257262|gb|ACDX02000001.1| GENE 78 90333 - 90782 759 149 aa, chain - ## HITS:1 COG:NMA1689 KEGG:ns NR:ns ## COG: NMA1689 COG2137 # Protein_GI_number: 15794582 # Func_class: R General function prediction only # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 147 1 147 153 181 82.0 4e-46 MKPQKSLRARAMDILSRQEISRVGLKRKLAPYAESEEELENVLDEFAERNWQSDQRYAEA YIHSKSRQHGSLRLKQALAQQGIDETVSREFMPDKARELQTAIAVLRKKFKQPAADLKDK QKQARFLAYRGFDMDTIHAALKSSWDEEI >gi|257257262|gb|ACDX02000001.1| GENE 79 90981 - 91691 1331 236 aa, chain - ## HITS:1 COG:NMA1688 KEGG:ns NR:ns ## COG: NMA1688 COG0546 # Protein_GI_number: 15794581 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Neisseria meningitidis Z2491 # 1 235 1 235 235 403 88.0 1e-112 MTAAIEHVQAAAFDLDGTLCDSVPDLAAAAEAMREYLGMEPLPAKTVESYVGDGIGKLVH RVITNDRNQEAAPDLWEKGFVFYMKYYRDHLSDFTHPYPETEAGLALLKSLGIPLVVITN KNEILAVELLKQLGLADYFSLILGGDSLPEKKPSPLPLQHAAEVLGIDPANMIMVGDSRN DIIAAKAAGCLSVGVTFGYGDMTLLSQDKATKPDWIIGSLPEIYENLQPKKAEDDE >gi|257257262|gb|ACDX02000001.1| GENE 80 92086 - 93351 1879 421 aa, chain + ## HITS:1 COG:NMA1687 KEGG:ns NR:ns ## COG: NMA1687 COG0334 # Protein_GI_number: 15794580 # Func_class: E Amino acid transport and metabolism # Function: Glutamate dehydrogenase/leucine dehydrogenase # Organism: Neisseria meningitidis Z2491 # 1 421 1 421 421 812 96.0 0 MSQSAAKETLNPFEIARKQVKTACDRLTADPAVYEILKNPQRVLEVTFPVKLDDGTVKTF TGYRSQHNNAVGPYKGGVRFHPNVNLDEVKALSIWMTIKCCVAGIPYGGGKGGITLDPRD YSEAELERISRAYSEAISPLIGEKIDIPAPDVNTNGKIMSWMVDAYENVVKKSAPGVFTG KPVEFGGSLARTEATGYGVNFAAVQALEKLGKDVKGATYAIQGFGNVGYHTGYYAHQSGA KVVAVSTVDVAIYNENGLDMEALFKEFQEKGFITNEAGYGKEISNAELLALDVDVLAPCA LENQLTSENAGKVRAKIVVEGANGPTTPEADAILRQNGVLVVPDILANCGGVVVSYFEWV QNLQGYYWEFDEVQEKETVVLRRAFRDIWNLAQEYDVDLRTASYMMSIRRVEKAMKLRGW Y >gi|257257262|gb|ACDX02000001.1| GENE 81 93433 - 94047 395 204 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261363695|ref|ZP_05976578.1| ## NR: gi|261363695|ref|ZP_05976578.1| hypothetical protein NEIMUCOT_03608 [Neisseria mucosa ATCC 25996] hypothetical protein NEIMUCOT_03608 [Neisseria mucosa ATCC 25996] # 1 204 1 204 204 407 100.0 1e-112 MKTYAFPFLSAVFLLAGCAAFSDDSTPSIREGNDSILSFGKLGSATEDEPAGGWVMLGDQ YTYVLDKGSSEKLSPVFKAKLKHPYEIKFASSMKNIKKAGFTVWQEDRRFSTLLCLSYPH TDKDEEKTLQKLAFTFSKGEKTPFKCINLDGKIYQPVPAAGSGLPLHVNLDIHTRSSNKN LTIDVPPLSAGIRPAMPPVHPLHF >gi|257257262|gb|ACDX02000001.1| GENE 82 94073 - 94672 800 199 aa, chain - ## HITS:1 COG:NMA0802 KEGG:ns NR:ns ## COG: NMA0802 COG0424 # Protein_GI_number: 15793776 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Nucleotide-binding protein implicated in inhibition of septum formation # Organism: Neisseria meningitidis Z2491 # 1 198 1 198 201 228 54.0 7e-60 MHTLYLASGSPRRREILENLRFKVIRIPADIDETPHSDEKAADYVQRMAQEKNAAAVEQW FATHDASPEYPILTADTTVAYQNHILGKPETEAQAAEMLARLSGQSHQVLTAVCVYWQRK TRGVLQTSDVRFKTLSAEEISAYIRSGEPMDKAGAYGIQGLGGVFVEHLQGSFTGVMGLP VYETVGLLEQFGLSIPPFA >gi|257257262|gb|ACDX02000001.1| GENE 83 94768 - 95247 793 159 aa, chain - ## HITS:1 COG:NMA0833 KEGG:ns NR:ns ## COG: NMA0833 COG0663 # Protein_GI_number: 15793804 # Func_class: R General function prediction only # Function: Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily # Organism: Neisseria meningitidis Z2491 # 1 159 1 159 176 266 80.0 1e-71 MNPIRPFLDHTPQIHESCLIDETSVIIGEVSLAEDVSVWPYAVLRGDVNSISIGARSNVQ DGSVLHVSHKNAEKPEGSPLIIGEDVTVGHKVMLHGCRIGDRVLIGMGTTILDDTVVESD VMIGAGSLVPPRKRLESGYLYVGSPVKQVRLLTEKEKNF >gi|257257262|gb|ACDX02000001.1| GENE 84 95700 - 96323 919 207 aa, chain + ## HITS:1 COG:NMB1669 KEGG:ns NR:ns ## COG: NMB1669 COG3230 # Protein_GI_number: 15677518 # Func_class: P Inorganic ion transport and metabolism # Function: Heme oxygenase # Organism: Neisseria meningitidis MC58 # 2 207 4 209 209 367 89.0 1e-102 MSETQELTFAKRLKEQTTTIHDSVDNLVMSVEPFTSKENYIKFLKLQSVFHKAVDHIYKD PELNKAIPELEYMARYDAVTQDLADLGDKPYEYGKPLPHETGNKAIGWLYCAEGSNLGAA FLFKHAQKLDYTGEHGARHLAPHPNGRGKHWRAFVEHLNALGLSPEAEAEAIQGAKDAFA FYKVVLRETFDLPAGAEAPEGFVPHRH >gi|257257262|gb|ACDX02000001.1| GENE 85 96536 - 98374 1833 612 aa, chain + ## HITS:1 COG:no KEGG:NLA_6130 NR:ns ## KEGG: NLA_6130 # Name: not_defined # Def: Ex13L # Organism: N.lactamica # Pathway: not_defined # 377 612 176 414 418 108 37.0 9e-22 MKESFKLSMLAIACSIALSACGSSGGGTPSAQPAPTPQQPGNNSGSGGGGDSKQTEDAKK AEEAKKAEEAKKAEEAKKAEEAKKAEEAKKAEEAKKANEANSGQGFGGEGKVMGKALDGG VLVAKKRETGDLEYAKTEAPTASDKNSVVLDGVAINTKDVKAGEFTLGERSTNGGKADAA QYAIHSGDLLPDVRYGGVADVTNLRDFKQALFVQGTPAGSDTVAALKGEATYKGIGLHFA NGLPVNTSSLNELSDTSAKSKLANLYPAARATDVTAKVNFDQKTINVGINRYSDQTVGGG SGGNRIAGVVKSNARDMAENLSFNGDLHGNTFSNKQGTMQGGFFGAKADQLAGTYSAAGK NQRDEDVVARGVFGAKRQDAAQAGGQPDAPVTKPKVDAAAAELKKGETGEQYVLSNIADL TKVIINGTAIALAPVTNKLHQTELGSDYKSFVASGNLSNVVFGAAKLADNAYSLFVQGVM STSLPSGTAKYAGDVLNFRARNLDDKENWVGDTGGYRTTGSFTADVNFDTKAIAGKINSG DRWFMNERAFTADIAGSSFNGKWDSGVQGSISGGFYGDKAAEMAGRYSYNEKPGDNGSSS NNAFGVFGGKKQ >gi|257257262|gb|ACDX02000001.1| GENE 86 98591 - 99721 890 376 aa, chain - ## HITS:1 COG:NMB0605 KEGG:ns NR:ns ## COG: NMB0605 COG0123 # Protein_GI_number: 15676509 # Func_class: B Chromatin structure and dynamics; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Deacetylases, including yeast histone deacetylase and acetoin utilization protein # Organism: Neisseria meningitidis MC58 # 1 347 3 349 369 523 72.0 1e-148 MKKLIRRLRTRLRRLLGKNARTVWISHPVFAQHQPGVGHPDSPERTAVIEAELKRQDIWR HLQTVEAEEISDARLALVHPRKYLRSLEACLPQPDKIYRLDGDTVMSHGSLKAARHAAGA VVQAVDMVMNKKAWHAFCAVRPPGHHAHSDKAGGFCLLNNVATGVMHAIAEYRLQRIAVI DFDVHYGDGTAEIFKDDPRVLFMNLFETDLFPFPETNHSANGANMLHLPFASNTGSRVFR TTVREQWLHKLTAFKPELVLLSAGFDGHKQDETGRLNLHEADFAWLTHKIIQAASSCSGR IVSVLEGGYTLEPLAKSAAAHISVLVGLPKADYVAAYQRHLKRGQKREDFQSSEWQSKLL NERLSENKIQGFQTTF >gi|257257262|gb|ACDX02000001.1| GENE 87 99952 - 100218 447 88 aa, chain + ## HITS:1 COG:NMA0811 KEGG:ns NR:ns ## COG: NMA0811 COG1862 # Protein_GI_number: 15793784 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YajC # Organism: Neisseria meningitidis Z2491 # 1 88 1 88 88 132 89.0 2e-31 MNQTVAQFAPLVLIMVVFYFLIMRPQQKKFKAHQAMLADLKVGDKVVLAAGFKGRVTKVS EQFFTVDIGQGAKIEVEVERNAIAAKAE >gi|257257262|gb|ACDX02000001.1| GENE 88 100294 - 102147 2035 617 aa, chain + ## HITS:1 COG:NMA0812 KEGG:ns NR:ns ## COG: NMA0812 COG0342 # Protein_GI_number: 15793785 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecD # Organism: Neisseria meningitidis Z2491 # 1 617 2 618 618 1095 91.0 0 MNRYPLWKYLLIACSILVAVVYSLPNLFGETPAVQVSTNRQAIIINEQTQSKVDAALKQA GIQTDGIFIANNSLKVRFKDTETQLKARDVIENTLGDGYITALNLLADSPEWMAKIGANP MFLGLDLRGGVHFTMQVDMKAAMQKTFERYSGDIRREMRREKIRTGTVRQIENGLIVPMQ DAADVQKAMPKLRQLFSEANLNADGNNITLTLSEEAINKVRSDAVKQNITTLHNRVNELG VAEPVIQQSGLDRIVVQLPGVQDTAKAKDIIGRTATLEVRMVEDDPVKVREALEGNVPSG FELLSSSGDHPESLLINKQVELTGDNINDAQPSFDQMGAPAVSLSLDSAGGSIFGELTAA NVGKRMAMVLIDQGKSEVVTAPVIRSAITGGRVEISGSMTQAEANDTSLLLRAGSLAAPM QIVEERTIGPSLGKENIEKGFNSTLWGFAAVALFMVVYYRLMGFFSTIALSTNILFLVGI LSAMQATLTLPGIAALALTLGMAIDSNVLINERIREELREGVPPQQAINLGFQHAWATIV DSNLTSLIAGIALLVFGSGPVRGFAVVHCLGILTSMYSSVVVFRALVNLWYGRRRKLQNI SIGAVWKPKAETAAGKE >gi|257257262|gb|ACDX02000001.1| GENE 89 102151 - 103086 1289 311 aa, chain + ## HITS:1 COG:NMA0813 KEGG:ns NR:ns ## COG: NMA0813 COG0341 # Protein_GI_number: 15793786 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecF # Organism: Neisseria meningitidis Z2491 # 1 311 1 311 311 554 95.0 1e-158 MELFKIKRDIPFMSYGKLTTFISLVTFIAAVFFLVTKGLNFSVEFTGGTVMEVQYQQGVD VNKTREKLDTLKMGDVQVQALGTNKHIMIRLPNKEGVTSAQLSNQVMDLLKKEQPDVTLR QVEFIGPQVGEELVTNGLMALGFVVAGIIIYLSMRFEWRFAVSAIIANMHDIVIILGCFA FFQWEFSLTVLAGILAVLGYSVNESVVVFDRIRENFRKPSMRGHTVPQVIDNAITATMSR TIITHGSTEAMVVSMLVFGGAALHGFSMALTIGIVFGIYSSVLVASPLLLMFGLSRDNIA KEVKKKEEVVV >gi|257257262|gb|ACDX02000001.1| GENE 90 103412 - 103969 709 185 aa, chain - ## HITS:1 COG:no KEGG:PT7_2258 NR:ns ## KEGG: PT7_2258 # Name: not_defined # Def: hypothetical protein # Organism: Pusillimonas_T7-7 # Pathway: not_defined # 59 167 31 140 141 67 36.0 2e-10 MNKNTKLLISAVIAAAALSACSSSSKGKPAAQPAPAPQQAAQQNQPFTPQTMKVDAIDST KEVHYRCGQNGQDPLSVMYGFKGNEPVAAQVKYKNELTPNLFRVVGSSDDINAFWGGNVA WVAGRANLGNIDKVDGNMLTVRGKTTVNGKEEVVDQIVAKYCSVANAPAKAGKPAPKKSA GKAKR >gi|257257262|gb|ACDX02000001.1| GENE 91 104271 - 105707 1388 478 aa, chain + ## HITS:1 COG:NMB1488 KEGG:ns NR:ns ## COG: NMB1488 COG1012 # Protein_GI_number: 15677341 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Neisseria meningitidis MC58 # 1 477 1 477 477 831 90.0 0 MNSFASLLNHPDISFSPIPDSIKVDNPATGETLAFVHTTHSDDLKLLIQKAEAAQKLWAA KTALERADVLWRWYFLIKENKEELARIMTMEQGKSLTEARGEMDYAASFVRWFAEEARRI DGDVLTSVKASQKLVVLKQPIGVTAAITPWNFPSAMIARKAAPALAVGCAMIVKPASLTP LSAYALTLLAYEAGVPQDLLPVVSGRASEISHEFATNPTVRKISFTGSTEVGAKIFADSA ADIKKLSLELGGNAPFIVFDDADLDKAVEGALASKFRNSGQTCVCTNRVYAQSGIYEEFC RKLSEKVAALKLGNGLDEGVNQGPLIEEKAVEKVEQHITDALSKGAACLTGGKRSELGGT FFQPTVLSGVTAQMAVAREETFGPLCPVFRFDTEAEVIVAANDTEYGLAAYLFTSDTARQ WRVGEALEYGMVGINTGLISNEAAPFGGVKRSGLGREGSKYGADEYLELKYLCIDVAD >gi|257257262|gb|ACDX02000001.1| GENE 92 105785 - 107104 1480 439 aa, chain - ## HITS:1 COG:mll1146 KEGG:ns NR:ns ## COG: mll1146 COG2733 # Protein_GI_number: 13471231 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Mesorhizobium loti # 12 437 16 428 431 204 31.0 4e-52 MHTLSEQVRLNEARKKLAKSRRWATGLLLAACGLFAVSAVYVRQYPWLGFVKAFAEAAMV GALADWFAVTALFRRPLGLPIPHTAILPRNQARIGDELGRFIEHNFLQGKPIAMRIYQAQ PSDKLLKWLDGEDVKSHWLPWLSKQIPTLLAIAKPEQTARFTTMLLEERYSGEQIGNTLA DGLRLLKAQGMHEKAFESLLRQIRRWLKTPETREMLEQNLREWAAKIEGGNPGTWDRLKA AVKSTLVEKVDDWAAEKALAWIDGYLATADKQDNALRRQFLVQYDELTERLTTSRLWHRR LDKFKKQLAQSPALQRQIMTLWRGILDWAREDVEKQDSLCQTQLEKLLNHMRSQAQAYPQ FMRRADIRISLLVRDFVMRYKDKAALFVADKVKGWDSRLMVEKLELSVGKDLQYIRINGT LVGGLVGLVIYTVSLWLAG >gi|257257262|gb|ACDX02000001.1| GENE 93 107375 - 108055 681 226 aa, chain - ## HITS:1 COG:NMB0759 KEGG:ns NR:ns ## COG: NMB0759 COG2836 # Protein_GI_number: 15676657 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis MC58 # 20 219 40 239 242 259 74.0 3e-69 MDENLTFLTLFLLGFFGGGHCVGMCGGLSSAFALQLPPNLNRFGLIVLLNLGRVSSYVLI GFLVGLIGQAGISLDDTRVLQQGLYIAANILLLLLGLYLAGISTAATRIERIGKPIWKRL NPFLNKLLPIRSVPACFGVGMLWGWLPCGLVYSASLYALGSGSAVHGALYMLAFALGTLP NLLAMGIFAAQLKTLLQKRSIRLLAGLTVAAWALWRLWVSVSGWTA >gi|257257262|gb|ACDX02000001.1| GENE 94 108504 - 111608 3042 1034 aa, chain + ## HITS:1 COG:PA4897 KEGG:ns NR:ns ## COG: PA4897 COG1629 # Protein_GI_number: 15600090 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Pseudomonas aeruginosa # 49 581 172 610 989 212 31.0 3e-54 MKPVKVNTLAACIATIGFSPIIYAADNTPTVILDTVTVKGTRNKDEIGKNRVYTREVVNL YKSKDDVETFKGNTVSDLLSGMSGVYSGDARNSGALDPNIRGVQGQGRIPVTIDGTEQAI TVWRGYAGANNRNYVDPNIISSVSIEKGPSFSRDMKSGIGGSVALKTIDADDIVPEGQKY GFEVKAEASNNSIKQRANVYEKSVDYRTLDAPAVALGGIWRAMLDDTDRIDQRFNGRNKF GKDKAYRIAAATKQDNFDAMLAYAYRSKGNYFSGKKGAERYGYIGPWTMETVNELNRQIA DAAARGEKFYGSEAMLGAPDIARIGLFYHPGGEVTNTSLENKSWLGKTTFRLPNRQTLKF GLRHTDSIFGEIMPSRVIGPLFSTPDNLNKIAEWPRAWVKQRSYNIDYSWKPEGSRWIDF DASLWTTRTKSKTNTAGGSPGDAMYEDRTDGVEQLPNINGRFNTIEGNAYYANNTRNGFN FSNRMKLHDKLTLTLMGDFQNEKLRSRNEFSEELSHDGLDKYREEIEASQLATNTELTRF GEPRNGRRREWNFGFNFRYQPMSWLTLTAGARYTNFKIQDDNERLKTGFDKYNNPLQVNR GEVFQFTRVATEQEYRDYLNAINNDEFNAARDSIEIDDRGVAILNPTPHHDENRPRLDKL TYYWRKDDRGRLNPADNPWFTVPDLHSQTINPAYDPNDPDSLRTVQKYMFMPRSDKIYRS PITPAELQRAHKQGGSGWVPAFSAAVNFTDNARAYLRYTESLRFPSIFEGTYGFSTAAGS FARMGYGWQPEHAKNWEVGYIHDLTGLFPKMKNADLRINYFRNKTKNIIDRDENFEFEQF DKQIRTGVELQARFDTGKFFGGVGVLRTLKNKVCDKSFAVSSVHDSSYLTGGGFIPAPEC NYGGLTDNGYLAGMVQPRWSVDADLGGRFFHNKLESGIRFHYHSRVYQNRRTVWQAYYDQ LNRINDYNLQADTDTMRWQPVAVWDAYLRYKIGKNLTAELVGSNLTNRYYLDPMSRSYLP APGRTIRVGITGKF >gi|257257262|gb|ACDX02000001.1| GENE 95 111922 - 113694 1396 590 aa, chain + ## HITS:1 COG:NMB1537 KEGG:ns NR:ns ## COG: NMB1537 COG0358 # Protein_GI_number: 15677389 # Func_class: L Replication, recombination and repair # Function: DNA primase (bacterial type) # Organism: Neisseria meningitidis MC58 # 1 590 1 590 590 1118 95.0 0 MIPSDFIDELLAKVDIVDIIDEQVPLKKGGANYMACCPFHKEKTPSFSVSPTKQFYHCFS CGAHGSAIGFVMEHQGLSFPEAVQFLADRVGMVVPKVRGQNDNPEVRAERKKKQQTLEET TAAAADFYAQQLKFNPAAKAYLDKRGLSAEVIAHYGLGYAPDGWQPLAQVFQPYPNTALV DTGMVIDNEGRHYDRFRHRIMFPIRNPRGQVIGFGGRVLDDSKPKYLNSPDTPLFDKGKN LYGLYEGRAAVKEAGRILVVEGYMDVVALAQFGVGYGVAALGTATTAEHVKILMRQADSI YFCFDGDSAGRKAAWRALENALPQLKDDKSLHFLFLPEEHDPDSYIRAYGKTQFEDALLN QSKPLSEYFWEHLSDDLNLNTQEGKAELVKTSSPLLAQITAPALAYLLKQRLSELVGIDP DNLAQLLGQEAPKRHVKQKSYKLPPISVKQPIMLTLVQRQIRSLLINPDWAAYIDLPDYL ALDGDFACLANLAETIKSHAAVPATAQVLEYMRGSPYEETVNQIFQSTLYSEEMEGGSEE DRENFQIGMKKLLNELKYKQIETLKQKSLQSGLNENEKKLLLSLLTAKQN >gi|257257262|gb|ACDX02000001.1| GENE 96 113915 - 115864 3255 649 aa, chain + ## HITS:1 COG:NMA1737 KEGG:ns NR:ns ## COG: NMA1737 COG0568 # Protein_GI_number: 15794630 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Neisseria meningitidis Z2491 # 1 649 1 642 642 998 90.0 0 MSKDQNHEDYQEQDDNRPLTLEEQRARLRQLIIMGKERGYITYSEINDALPDDMSDADQI DNIVSMISGLGIQVTEQAPDAEDILLSDNAAAVTDDDAVAEAEAALSSADSEFGRTTDPV RMYMREMGQVDLLTREDEIIIAKKIENALKNMVQAISACPGSIAEILELIEQIRKDEIRV DEVVEAIIDPNEVLLNELGLGHLESASNDDDSGSSDEDEEDEDEDDDDSGSDAEAMSAAH LAELKQKVLDHFAFIESEYGKMIKKLEKHDSSHPDYLAHRDAIANKLLEVRFATRQIESL SGNLRSRVENIRKLEREIRDICLDRAHMERDYFIQNFLPEITNLKWVEEEVAKGRVWSDA LDRFRHAILEKQTELANMEKETRISIEELKDINKNMVSSEKETAAAKQEMIQANLRLVIS IAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQART IRIPVHMIETINKMNRISRQYLQETGEEPDSAKLAELMEMPEDKIRKIMKIAKEPISMET PIGDDDDSHLGDFIEDANNVAPADAAMYTSLHEVTKEILESLTPREAKVLRMRFGIDMNT DHTLEEVGKQFDVTRERIRQIEAKALRKLRHPTRSDRLRSFLDSEDSKL >gi|257257262|gb|ACDX02000001.1| GENE 97 116267 - 117016 922 249 aa, chain - ## HITS:1 COG:RSc0680 KEGG:ns NR:ns ## COG: RSc0680 COG0204 # Protein_GI_number: 17545399 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Ralstonia solanacearum # 6 235 22 252 266 130 34.0 2e-30 MIAKLRFTFRLLCIGFCLLYGMAEMFFLFPFYSKWRKLRAIQIWSLRVLASCGMKLETFG TLPQEGQAQLLISNHISWLDIMAVNGAFPGRFVAKDDVAKWPVVGYLATQAQTVYVSRNK GTKGNTAKIATVTEALKNGDTVTIFPEGTSTEGYEILSFKPSFFQTAYDAGVPIIPMLCR YPNPDGSSPNLQAAYVGDTSLWQSICMIISQPSSKVELHFLEPVPAKEDRYETAQEVHGI LSRKLKELG >gi|257257262|gb|ACDX02000001.1| GENE 98 117121 - 117870 819 249 aa, chain - ## HITS:1 COG:RSc1538 KEGG:ns NR:ns ## COG: RSc1538 COG3176 # Protein_GI_number: 17546257 # Func_class: R General function prediction only # Function: Putative hemolysin # Organism: Ralstonia solanacearum # 15 245 43 275 278 186 41.0 4e-47 MSSSRFNQTGPKIGLSVRLAETQAEIEAAQRLRYQVFAQELGAEIESDDGRDVDPYDEHC HHLLAFDDATGDVIGCYRLITEETAKKVGGWYSEHEFDLSPLKDILPQTVELGRACTHPD YRNGGLVMLLWSGLVKFMKDENLRFMIGCGSIDMHDGGSDAAGLYHALKSKYLAPEKWCV KPLNPLKWDKITPSEKPDVPPLIKGYLNAGAWFCGEPCVDEAFNCADVLIMMDITRLADR YLQRFAPRL >gi|257257262|gb|ACDX02000001.1| GENE 99 118184 - 119530 1165 448 aa, chain + ## HITS:1 COG:XF1981 KEGG:ns NR:ns ## COG: XF1981 COG5295 # Protein_GI_number: 15838575 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Xylella fastidiosa 9a5c # 38 448 817 1190 1190 99 32.0 1e-20 MENEKMKLNLSVKPLCLVLSLVFANVCVAEGIATGAMHKNGSVALGKDSKAGENATALGD KAAAAGYKSVAAGYDSNASGLSASALGSEAKAEALRAVAVGFRANAKGTNDIAVGGASKA SGGQSVAVGLMSQATGLRSIAVGDSAKAADIDAVAFGRGSEANALSSTAVGDRAKANGTQ AVALASAAEANGYQAVAVGTRAVAEETNSVALGVESSSTALNGLAAGTRARVRKSGGTAL GAGAAAFEEKSAALGYKAEARQQNSVALGTDSVADTAAGVAGHDFATGAASTETGKTWVS TLGAVSVGSEQNSRQITNVAAGKEDTDAVNVAQVKSFARQTQSSLAAAESNHQTQIAALR NEAKVRMDKLEERADSGSAAAIAVGSLGQAYQPGQGAVSVASGIWRGKSGYAVGISKVSA SGKWLVKGSAVGAAKGGAGGGASVTYLW >gi|257257262|gb|ACDX02000001.1| GENE 100 119669 - 120808 1356 379 aa, chain + ## HITS:1 COG:BS_yqiG KEGG:ns NR:ns ## COG: BS_yqiG COG1902 # Protein_GI_number: 16079477 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Bacillus subtilis # 1 367 1 369 372 348 47.0 8e-96 MNPKYAPLFQSFTLNNGVTVKNRLAVAPMTHFGSHADGLISDQERTFLGNRAGDMGLFIS AATLVQEGGKAFRGQPEATGEHCLDSLKETAQIIQKQGAKAILQIHHGGSQAMVELNRRD KISASASEKDGAREASAAEVEELIASFAQAADLALRAGFDGVEIHGANGYLIQQFYSAQS NRRNDQWGGSLENRMRFPLAVVDAVAAVREKHQRNDFIIGYRFSPEEAGEDGLTMAETGA LIDALVQKPLQYLHVSLWEFDKKIRRGGDTAQTRMQFIHDRINGKLPLIGVGNLFTADDI LAAFETGWAEFIALGKTVMINPHIATQISEGREAEIETQLDPTRADHYGLPDILWEFSAS GTQSWLPPVKGADWKPVDA >gi|257257262|gb|ACDX02000001.1| GENE 101 120987 - 121766 1004 259 aa, chain + ## HITS:1 COG:NMB0697 KEGG:ns NR:ns ## COG: NMB0697 COG0030 # Protein_GI_number: 15676595 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Dimethyladenosine transferase (rRNA methylation) # Organism: Neisseria meningitidis MC58 # 1 259 1 259 259 475 96.0 1e-134 MKEHKARKRFGQNFLQDTRIIADIVNAVRPQADDVVIEIGPGLAAITEPLAKKLNSLHVI EIDRDIVRRLKTLPFADKLVIHEGDVLQFDFNGIAGKKKIVGNLPYNISTPLLFKLAEVA DDVVDMHFMLQKEVVERMVAAPKSNDYGRLGVMLQYFFDMELLIDVPPESFDPAPKVDSA VVRMIPVKHRIGKADDFEHFAKLVKLAFHQRRKTIRNNLKELAGDEDLQAVGISPQDRAE HIAPEKYVELSNYLVRKVV >gi|257257262|gb|ACDX02000001.1| GENE 102 121784 - 122512 606 242 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 239 1 242 245 238 46 2e-61 MIKFKNVHKHFKDLHVINGVNLEVKQGEVVVVCGPSGSGKSTLIRTVNQLESIESGEIWV DGINVADPQTDLNKVREEVGFVFQGFNLYPHLTVLENIILSPMKVKKQSREQAEEKAMEL LERVGLAHKKDAFPSQLSGGQQQRVAIARGLAMEPRVMLFDEPTSALDPEMVGEVLKVMQ DLAESGMTMMCVTHEMGFAREVADRIIFVDKGQILENETPEEFFTNPKHERAKQFLQQVM TH >gi|257257262|gb|ACDX02000001.1| GENE 103 122634 - 122993 546 119 aa, chain + ## HITS:1 COG:no KEGG:NMC0646 NR:ns ## KEGG: NMC0646 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 119 6 124 124 206 90.0 2e-52 MYFVDRTAVVLKPTARFLEWLKSADENMPDLTIEQIRANCSVFLVPQFDEPEAVIAYFDE RYQQIFEAELAGWDIDKNEWPQDMSLKAFWEFFDTEIHDMVLDMEEAELSITPVFDNMM >gi|257257262|gb|ACDX02000001.1| GENE 104 123106 - 123432 197 108 aa, chain + ## HITS:1 COG:no KEGG:NLA_15410 NR:ns ## KEGG: NLA_15410 # Name: folI # Def: transcriptional regulator # Organism: N.lactamica # Pathway: not_defined # 1 102 37 139 148 124 55.0 2e-27 MMWFGLAALAGSFVHAWRVVNLRTAGAVKKIAIDRHARASVFCGDGEGQGVVLDGATMLT PYALFLQWNADGKTIRQCVTPDMADKESYRRLKVWARWCQAQDAGHPL >gi|257257262|gb|ACDX02000001.1| GENE 105 123567 - 124841 1452 424 aa, chain + ## HITS:1 COG:NMA0896 KEGG:ns NR:ns ## COG: NMA0896 COG0285 # Protein_GI_number: 15793864 # Func_class: H Coenzyme transport and metabolism # Function: Folylpolyglutamate synthase # Organism: Neisseria meningitidis Z2491 # 1 424 1 424 424 819 93.0 0 MKTLQDWLSHLETAHSGGLIDMGLERTGEVKKRMKLEPQCPVVVVAGTNGKGSVCAYLTQ IYKQAGFKVGTLTSPHLLRYNERIAVNAEPVSDDLITASFERIEAARGEISLTYFEFNAL AAVDIFIREQVDVMILEVGLGGRLDAVNVFDCDCAVVTSVDLDHQAFLGDTVEQVGFEKA GVFRSGKPAICGQNPAPESLVAHAEAIGAKLLMVQRDFDFSSLENIQWNYRFHPQHSDDP ARNRNSLPFPALRGAYQLSNAACALTVLECLNEKLPVDIGAIKRGLLLVENPGRFQVLPG RPLTVLDVGHNPHAARALRRSLINLAFAQKRTAVFSMLSDKDIDGVLEIVKDQFDEWYIA PLDVPRGMTAEALQAKLEAQNIENIQTFTSVREAYRAALAKAGENDRIVVFGSFHTVADV MAAL >gi|257257262|gb|ACDX02000001.1| GENE 106 124854 - 126074 1452 406 aa, chain + ## HITS:1 COG:no KEGG:NLA_15430 NR:ns ## KEGG: NLA_15430 # Name: tpc # Def: tetrapac protein # Organism: N.lactamica # Pathway: not_defined # 1 406 1 360 360 131 45.0 5e-29 MSDNKQNEVLTGYEQLKRRNRRRLVMASGLVAASTVLLGVALSTGPENKPEENAQTTTIQ QNNANAEPANLADATVLEPSTKEDLEAAAEAAKNADAEVADKPQETAAPEQTAQAEPQPD APPAAPEDVGPPLVLINDTLSDSDIKGLEESEKIQKAEAAKREAAERRAEERRRNREEQR KAQQLQAQEAAEREANAAARKRALQAAKAEKAERAAAAERNKLAQLEKAEKAVAERKALK AKEEAAAKHKAAAEKVKEAVTASASEPKERIRVDASKYEKIETANKKASAVREAEAKVAK AKTEPTAKAEKTATAERSSEKAKTKTAEVKSGKKAAIQAGYAEKERALSLQRKMKAAGID STITEVMTDKGKVYRVKSGAYKNAYDAERDLNKLRVHGIAGQVTNE >gi|257257262|gb|ACDX02000001.1| GENE 107 126067 - 126573 564 168 aa, chain + ## HITS:1 COG:NMB0691 KEGG:ns NR:ns ## COG: NMB0691 COG1286 # Protein_GI_number: 15676589 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein, required for colicin V production # Organism: Neisseria meningitidis MC58 # 1 164 1 164 165 171 54.0 5e-43 MNDIPLADILAFGVIAACIVMSMIRGVIAEAGSLFAWVISFLLAKTFAVPFSEVAFKSIQ PRALGVAISFVVIFFLARFLQQFLRTILTNAASSMGLGSVNRVLGGVFGAVKGVLLVTLA VMVCAYTDLPETEDWQSSYSIPYFQSLSEVIMPYLPGQKDKTEDKAEL >gi|257257262|gb|ACDX02000001.1| GENE 108 126960 - 127325 593 121 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|161869521|ref|YP_001598688.1| 50S ribosomal protein L19 [Neisseria meningitidis 053442] # 1 121 1 121 121 233 99 8e-60 MNLIQQLEQEEIARLNKDIPEFAPGDTVVVSVRVVEGSRSRLQAYEGVVIARRNRGLNSN FIVRKISSGEGVERTFQLYSPTVEKIEVKRRGDVRRAKLYYLRGLTGKAARIKEKLPARK G >gi|257257262|gb|ACDX02000001.1| GENE 109 127339 - 128088 604 249 aa, chain - ## HITS:1 COG:NMB0590 KEGG:ns NR:ns ## COG: NMB0590 COG0336 # Protein_GI_number: 15676495 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-(guanine-N1)-methyltransferase # Organism: Neisseria meningitidis MC58 # 1 249 1 249 249 434 87.0 1e-122 MLIQAITIFPEMFDSITEYGVTGRAKKQNLWQFQAINPRKFADNKLGYIDDRPFGGGPGM IMMAPPLQAAIEEAKQTSSAPAKVIYLSPQGQPLTHKKAVELAKSPHLILLCGRYEGIDE RLLQSSVDEEISIGDFVVSGGELPAMMLMDAVLRLIPGVLGDIQSAEQDSFSDDLLDCPH YTKPLEFQGMTVPDVLRSGNHGLIAEWRLKQSLRRTLERRPDLLEKRSLIPKESRLLKEI LQEQQEIQS >gi|257257262|gb|ACDX02000001.1| GENE 110 128088 - 128597 185 169 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163796730|ref|ZP_02190688.1| 50S ribosomal protein L19 [alpha proteobacterium BAL199] # 7 164 4 160 179 75 27 2e-12 MTDTRQRVAMGYIKGVFGIKGWLKIAANTEYADSLLDYPEWQLSKDGKTLNVTLEAGKIV SGELQVKFEGIDDRDQAFALRGYTIEIPREEFAPTEEDEYYWADLVGMTVVNKDDIVLGK VTNLMETGANDVLMINGEHGQILIPFVSNYIETVDTESKTITADWGLDY >gi|257257262|gb|ACDX02000001.1| GENE 111 128616 - 128864 379 82 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225373729|ref|ZP_03750950.1| hypothetical protein NEISUBOT_02020 [Neisseria subflava NJ9703] # 1 82 1 82 82 150 89 5e-35 MVVIRLARGGSKHRPFFHVVVADSHNRRDGRFIERVGFYNPVANEKQERVRLQADRLNHW IAQGAQVSDAVAKLIKEQKAAA >gi|257257262|gb|ACDX02000001.1| GENE 112 128941 - 131334 2899 797 aa, chain - ## HITS:1 COG:NMA0796_1 KEGG:ns NR:ns ## COG: NMA0796_1 COG1042 # Protein_GI_number: 15793770 # Func_class: C Energy production and conversion # Function: Acyl-CoA synthetase (NDP forming) # Organism: Neisseria meningitidis Z2491 # 1 619 1 620 620 714 62.0 0 MSAQSMSGYFFMPNHIILVGASERPYSLGERILSNLLSAPFQGQITPVNLRHRTVAGLTS YTNLNKIPGSADLVIAVTPPDSYDALFKSCRKKQFGHIILIQDWESLSDDEWHTAEAAIK KHHGDKLNISVCSPAGVQLPSQSLNISSQPDHPAGYTALLTGHASVSSEINLMLQKMGQG ISRHISLNYPLSPTTSADWLNRFGHNRHTKVAVIEHNPAENQRNLFSAIRHFTRHTPLIL HVTYRSDDTEKAVLRCLARHCNFLATFSSSELEAALHARLSDLPPLNSINILSNTPAEWL GTCAPQNLKLQFPTEQPNIRQGYIGSTPTPAHYHSIASQQLQNTHTEALLAIVSPTDSPD EKNLTRTLSMLAQQTAKPLLVSSRFSDDLLHFDRPEQALQAVSFRNIADQLQKEQLHIAT PKKGRLKTPQARNITKALASKDLPLLAEALCLPAYQHTVHNAVQFRFQRHSAYGDVLTVC HQGRSTAALPPFSTLDIEHIAHFAQLENTHILNQLLHTLNTLSQRQQYIGEILLNLNSNQ YSSDFILQADERPSPKNKPTNIATLKLEQAAAKVQTAAEYLRSKNPAAAEFLRNTGEAAA ELLGAKTESDAPIQNVLAPYPTEHPATLTLKNGEIVTIHPLTPEDAEAKQQFVRSLSPQA RYTRFMTHTNELPIPTLARFSKLDYHSEAAWTARNSDDLIVAVSRFSRINRNECEFGITL AENVRGKGLAAEMMKLIIQSATQQGYRVMSAQILKSNTPMLKLAEKSGFTITPSEEDNTL CQAHLSLTTLQNSNKNK >gi|257257262|gb|ACDX02000001.1| GENE 113 131700 - 133115 1815 471 aa, chain - ## HITS:1 COG:NMB0594 KEGG:ns NR:ns ## COG: NMB0594 COG0642 # Protein_GI_number: 15676499 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Neisseria meningitidis MC58 # 1 465 1 465 468 831 86.0 0 MKLFQRIFATFCAVIVCAIFVASFSFWLVQNTLAENQFNQRRTIETTLMNSILSAFRARG DSGAREILAEWEDSPVSNSVYVILGDEKKDILDRNIDGHTIERARVFAINNPNSDLAHIE YDRFGEEYLFFIKGWDSHQAQRLPSPLFIPGLPLAPIWHEFIILSFIIVVGLLMAYILAS NITKPIKILGSGMDRVANGELETRISQQVDDRDDELSHLAIQFDKMAEKLEKLVAKERHL LHHVSHEMRSPLARMQAIVGLIQAQPQKQEQYLKRLEGELTRMDTLVGELLTLSRLETSN IPLEKESLKLVPFLKNIVEDNQSIAQQNKQTVTLSVEPRIPENATVCANEGYLYRAFDNV IRNAINYSPEGSTIRVNIGQDGKHWIVDVTDNGPGVDEMQLPHIFTAFYRADSSASKPGT GLGLALTQHIMEQHNGKIMAENIKPNGLKMHFILPKKKVNGKAEKPHPKTT >gi|257257262|gb|ACDX02000001.1| GENE 114 133131 - 133808 1018 225 aa, chain - ## HITS:1 COG:NMA0798 KEGG:ns NR:ns ## COG: NMA0798 COG0745 # Protein_GI_number: 15793772 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Neisseria meningitidis Z2491 # 1 225 1 225 225 381 94.0 1e-106 MSRVLLVDDDALLTELLTEYLTAEGLNVHSVPDGEAGVHEILTGQYDVVVLDSMMPKMNG LDVLKNVRSQSTVPIIMLTAKGDDIDRIIGLEMGADDYVPKPCTPRELLARINAILRRAQ QSGEPNNAPNSISVSDVVLYPAKRQATIKDTPLELTSTEFNLLEVLMRHAGQVVSKETLS IEALDRKLAKFDRSIDVHISSIRHKLGDASLIQTVRGLGYLFVKN >gi|257257262|gb|ACDX02000001.1| GENE 115 134178 - 135266 1251 362 aa, chain + ## HITS:1 COG:NMA2039_2 KEGG:ns NR:ns ## COG: NMA2039_2 COG0077 # Protein_GI_number: 15794919 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydratase # Organism: Neisseria meningitidis Z2491 # 90 362 1 273 273 457 84.0 1e-128 MSLSIDEQLLPHRNAIDEIDAEILRLLNERAGHAHAIGELKGTGAVYRPEREVAVLRRIQ SLNQGPLPDESIARLFREVMSECLALERPLTIAYLGPQGTFTQQAAIKHFGHAAHTAAFQ TIDQCFRQVETRQADYLVAPVENSTEGSVGRTLDLLAVTALKACGEVIVRIHHNLLRKGT HESGGITKVFAHAQALAQCNDWLGRNLPNAERIAVSSNGEAARLVAESDDPSIAAIAGRT AADIYHLNYVAECIEDEPNNTTRFLVMGHQDTGSSGNDKTSLAVSAPNRAGAVAALLQPF TESGISMTKFESRPSKSALWEYLFFIDIEGHQNDEKVQNALRLLSERASFVKVIGSYPAA VL >gi|257257262|gb|ACDX02000001.1| GENE 116 135335 - 136078 1293 247 aa, chain - ## HITS:1 COG:NMB1039 KEGG:ns NR:ns ## COG: NMB1039 COG1636 # Protein_GI_number: 15676926 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 1 235 1 235 241 474 94.0 1e-134 MTDKTSPIVTDINRPVLVPPGGHKKVLLHSCCAPCSGEVMEAMLASGIDYTIYFYNPNIH PLKEYMLRKEENMRFADKFGIPFIDKDDDYENDRKEWFAKAKGMEFEPERGIRCTMCFDM RFEKAAQYAHENGFPVFTSSLGISRWKNMAQINDCGHRAAAPYDDVVYWDFNWRKGGGSA RMIEISKREHFYQQEYCGCAYSLRDSNAHRKSQGRIPIKLGVLYYGDESTQYEPSQDEQA DKIVVDK >gi|257257262|gb|ACDX02000001.1| GENE 117 136154 - 137605 2123 483 aa, chain - ## HITS:1 COG:no KEGG:MS2191 NR:ns ## KEGG: MS2191 # Name: not_defined # Def: hypothetical protein # Organism: M.succiniciproducens # Pathway: not_defined # 6 448 3 446 450 460 50.0 1e-128 MPKRPFKTVLTAFTLAALSACSLVKYQPVATINKIDMNQGYRFETSQFRREEDDTFIILM LSGGGTRAAALGYGVLEQLQQQKVTIGGKSKSLMSNVDLVVGVSGGSVLAAYFALKGEET IPMFYKRFLHQNFQRQVVKQAFSMSNLPRLASPEYGRGDLLQEQFENHLFGKATFRDLEM HGKGPFAIISATDMGAGERLNFTQEYFDPMCIDLGRLRLARAVAASSSVPMVFAPITLNN NGGNCGYTLPPQLQMTGLESQKQQNATYQEFKNRFNKYSDSKTRPYIHLIDGGLTDNLGM RSLLDMTEIYPDKVLEQQIRSRNLRHIVVISVNAQNQISSNMDKTAAVPGFRDVVTAIIN IPIDQYTQESLRRFRAFVDQRNEANQQSGDGISFSFVSLNLKDLPPSALRDKVLNIPTSF YLPPEDVDNLRTAAAELMKQSQDYQKLLHEFAAHPNPETIFAEPPPADPKDGKAAKKQNK PIQ >gi|257257262|gb|ACDX02000001.1| GENE 118 137769 - 138380 842 203 aa, chain - ## HITS:1 COG:NMA1261 KEGG:ns NR:ns ## COG: NMA1261 COG0344 # Protein_GI_number: 15794194 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis Z2491 # 1 199 1 199 200 258 81.0 4e-69 MFNVSAVIAAYLIGSLSFAVIVSKYYGMDDPRTYGSGNPGATNVLRSGKKKAAALTLLGD ALKGLVAVVLARYLQDALNLSDITIAAVAVAALVGHMWPLFFGFKGGKGVATALGVLLAL SPATALVCAAIWLVMAFGFKVSSLAALVATVAAPLVAFWLMPYPSWAWATVVIAVLVLYR HKSNIQNLLQGKEGKIGDKADKP >gi|257257262|gb|ACDX02000001.1| GENE 119 138437 - 138787 567 116 aa, chain + ## HITS:1 COG:NMB1063 KEGG:ns NR:ns ## COG: NMB1063 COG1539 # Protein_GI_number: 15676947 # Func_class: H Coenzyme transport and metabolism # Function: Dihydroneopterin aldolase # Organism: Neisseria meningitidis MC58 # 1 115 1 115 118 163 71.0 8e-41 MDKIFLRGMKADTLIGVYDWERERPQTLILDLDIGIPEQSGQDDHIGNTVHYGEVCEAVR ASLAEQSFLLLESLAEHIAKLILDNFGALNVRVRIIKPGILPDIKEVGIEIERSKV >gi|257257262|gb|ACDX02000001.1| GENE 120 138919 - 139452 962 177 aa, chain + ## HITS:1 COG:NMB1064 KEGG:ns NR:ns ## COG: NMB1064 COG0494 # Protein_GI_number: 15676948 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Neisseria meningitidis MC58 # 1 177 1 178 178 296 83.0 1e-80 MDLKETKLSSESIYQGSFVSINRDKVRLPNGNESQRIVISHPGAACVLAITDEGKVVLVR QWRYAAGIATIELPAGKLDAGEDPAECALRELAEETPYTADSVKLISSFYTAIGFCDEKM YLYKAEGVRLGSTLSNDEDEITETVLMSKEEVRSALEHNEIKDGKTLIGLQYWLMQD >gi|257257262|gb|ACDX02000001.1| GENE 121 139521 - 139943 765 140 aa, chain - ## HITS:1 COG:ECs4633 KEGG:ns NR:ns ## COG: ECs4633 COG3753 # Protein_GI_number: 15833887 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 32 117 26 111 135 78 45.0 4e-15 MALMDSLLNAAAQALGGKDGIGAQNSLTDMAMDLVRQQGGVGSLINQLQQGGLGDVLNSW VSNQQDNAPISGSDLQNALGSDTISQVAQKFGIDANQAGDLLAQVLPNLVDKATPNGSAQ EADGFGLDDIASAILKNFTK >gi|257257262|gb|ACDX02000001.1| GENE 122 140138 - 141121 964 327 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|288575265|ref|ZP_05976619.2| ## NR: gi|288575265|ref|ZP_05976619.2| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 327 18 344 344 662 100.0 0 MSILSKIFGNKPSDETAQEPRKLSAQEKSEGAARAIYAKDKVYVPLSAMQADVSEGTGIP YIGRLKDGRTVLYLFETYEAARTFSDGQDGALDGIGLVGALDKADQFNNLNNVLRVAHSL GIQLMEYRGQDGEHFECALSWLMRVNGAGSMAASREKMDALSIGTDAKLPLQFHPIAIVG FSNPYKVTPARAEELFKQFTNVEDDELLDFFAGNTPQENVLLIGLVEKYSADLAKSVKYI VWNQLAEQPLFVGISRKEGGLYARDGYLYLFYTDRFQHMGPAGCHPVSGKEAVLDLVRRH ELKGIALTDGLHNMARFENDVIFQDGE >gi|257257262|gb|ACDX02000001.1| GENE 123 141276 - 142244 1184 322 aa, chain + ## HITS:1 COG:no KEGG:APJL_1729 NR:ns ## KEGG: APJL_1729 # Name: not_defined # Def: hypothetical protein # Organism: A.pleuropneumoniae_JL03 # Pathway: not_defined # 3 322 23 342 342 283 42.0 8e-75 MTLRTSTLSLFTLLILFPTVAAANDEPPADGDTWLDHRHKGVSKRLDKWSNRIDDWFGEP NPDHPADANLRLMLDTEWNPDDKFTVTPRVRGRLKLPTLEKKVHVVFGDDSLDDELKHEA NAYRNRTNTNGRIFDASQSRDNNASLAVRWSEAFAKQRTNTDFDIGIRSGSDLFARAKSS SNWQLTDHIDTSLEQIYRYGIKSKHHVRTNWETRYTPNEKSFIANQAHLQYEHDKTEDWT WGNSLFRQHNLGKHRHVNYGVYTGGNIEKRKAALNTYGPFTTYRQPIWRNWLFTQTELNY YNNRKENQKHRVGALLRIEALF >gi|257257262|gb|ACDX02000001.1| GENE 124 142338 - 142838 510 166 aa, chain - ## HITS:1 COG:NMA1551 KEGG:ns NR:ns ## COG: NMA1551 COG0816 # Protein_GI_number: 15794444 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) # Organism: Neisseria meningitidis Z2491 # 9 158 1 150 151 254 82.0 4e-68 MRLYVGQVMHKAPVGTVLAFDFGEARIGVAQGDAELGLSHPLATVTGNSNDEKFNAIAKL IREWQPKHLVVGLPTHADGTEHELTRLSRKFGRRLHGRFNLPIYWVDERMSSLYAESLLA EAQVFGRKQKAVLDQVAAQAILQGFFDGGAAEYFNGREEGSEESSD >gi|257257262|gb|ACDX02000001.1| GENE 125 142807 - 143355 649 182 aa, chain - ## HITS:1 COG:NMA1550 KEGG:ns NR:ns ## COG: NMA1550 COG1678 # Protein_GI_number: 15794443 # Func_class: K Transcription # Function: Putative transcriptional regulator # Organism: Neisseria meningitidis Z2491 # 1 182 1 182 182 315 80.0 4e-86 MNLTDHFLIAMPDMDDPFFENSVIYVCEHNEEGALGIIINKPSPITMDMIFAATDRNIPL RMQHEHVMMGGPVQIDRGYVVHTPVGNWQNSMIVSDDIALTSSRDVIENLSRQGAVDKIL ISIGYSSWSKGQLERELADNVWLTVKADEHILFDMPYEHRYAAAFAKLGIQPDALVCGAG HA >gi|257257262|gb|ACDX02000001.1| GENE 126 143368 - 143919 414 183 aa, chain - ## HITS:1 COG:NMB1335 KEGG:ns NR:ns ## COG: NMB1335 COG3045 # Protein_GI_number: 15677201 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 17 182 16 182 186 243 73.0 1e-64 MNKIILPALCALLLASCGNDTDKIGRASTVFHMLGKNDRIEVEGFDDPDVQGVACYISYA KKGGLKETVNLEEDASDASVSCVQTAEVIRYNEQAVVKPREVFKRSASLAFKSQQIIRYY DPKRKAFAYLVYSDKIVQGSPKNSLSAVSCFGGAKADAQQIAGGMEGKQIYGACVVDAPV PNK >gi|257257262|gb|ACDX02000001.1| GENE 127 144115 - 145872 2014 585 aa, chain + ## HITS:1 COG:NMB1333_2 KEGG:ns NR:ns ## COG: NMB1333_2 COG4942 # Protein_GI_number: 15677199 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Membrane-bound metallopeptidase # Organism: Neisseria meningitidis MC58 # 228 584 1 355 356 399 66.0 1e-111 MRYKPLLLALLIGFASPSFAAKDAPKEKAAPVKKSVKAKKDAVEPAKKESVKDKAKPAAK NARDKTDDKPVAKSKKETAEAAKHERAKERKNDKEAKKQDKADKTKKGEAKTEEKAGKAV PAKTEPVKGKDKAAEKPAAKNNVKAKKEAAELPKKDEAAAKQDRKAVEKKADKADKKTAA ADSDDFKSAVTAAANDLESKKSLRSRNESFIIHVNTTLKQLQQSRINLSAINRQQRDAWD KFQKLNADLNHLKTQVSNTRAQISRFVSGNYKNSQPNAVALFLKNAEPGQKTRFLRYTRY INTANEQVIKDLEKQQKELAAQEQKINNELAYLKKLQVNVQSSLRRHGVTNTAEQAESHR QNAQMAKDAQKKINHKENEQRLNNLLKDLDKRKAEQHRQEAEARKKAAEARLAAAEKARK DRASAAQKATDERAAMSNLTAEDMSIRAPSYVSISNANSFSRMQGRLKKPVSGTLAGLFG QDRGDGEVWKGVFYQTTPSTVSSIAAGTVTYADELEGFGKVIVIDHGDGYVSIYSGLSEI EVAKGYAVAAGNRLGISGTLPSGMEGLYLEVRYNGQAMNPLSWIS >gi|257257262|gb|ACDX02000001.1| GENE 128 146137 - 147639 2053 500 aa, chain + ## HITS:1 COG:NMA1546 KEGG:ns NR:ns ## COG: NMA1546 COG0793 # Protein_GI_number: 15794439 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protease # Organism: Neisseria meningitidis Z2491 # 1 486 1 481 494 723 82.0 0 MSTSTLKKVALYTLGAFSGVALSLSVQSFAAEKDKKDNETLPVQSIRNMAEVYGQIKANY YQDKSDADLFEGAMKGMVSDLDPHSEYLDKKGFADMKESTSGEFGGLGMEIGQEDGFIKV VAPIEDTPAERAGVKSGDFIVKIDNVSTRGLTTSEAVKKMRGKPGTKITLTLSRKNADKP IVVNLTRAIIKVKSVRHHLLEPNYGYIRVSQFQERTVAAINESAKALIKENKGAPLKGLV LDLRDDPGGLLDGAVGVSAAFLPADAKVVSTKGRDGKESSVLKARPEDYIRVSGKDPLAD LPTELKTIPMTVLINSGSASASEIVAGALQDHKRAVVVGTQSFGKGSVQTLIPLSNGSAV KLTTALYYTPNDRSIQAQGIVPDVEVKDKDRAFESREADLAGHIGNPLGGEDVNSSNEIS TPDSNEAAKADENAKSKKGKDKEKDEDISSRRIPNPAKDDQLRKALDLVKNPAEWQKSLG LAAKKPAPKKDKKDGKDEGK >gi|257257262|gb|ACDX02000001.1| GENE 129 147735 - 149114 2084 459 aa, chain + ## HITS:1 COG:NMB0782 KEGG:ns NR:ns ## COG: NMB0782 COG1066 # Protein_GI_number: 15676680 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATP-dependent serine protease # Organism: Neisseria meningitidis MC58 # 1 457 1 457 459 884 97.0 0 MAKAPKTIYQCTECGGTSPKWQGKCPHCGEWNTLQESLAAPEPKNARFQSWAADTSTVQS LSAVTATEVPRNPTGMGELDRVLGGGLVDGAVILLGGDPGIGKSTLLLQTIAKMAQSRKV LYVSGEESAQQVALRAQRLELPTEGVNLLAEIRMEAIQAALKQHQPEVVVIDSIQTMYSD QITSAPGSVSQVRECAAQLTRMAKQMGIAMILVGHVTKDGAIAGPRVLEHMVDTVLYFEG DQHSNYRMIRAIKNRFGAANELGVFAMTENGLKGVSNPSAIFLASYRDDTPGSCVLVTQE GSRPLLVEIQALVDDAHGFTPKRLTVGLEQNRLAMLLAVLNRHGGIACFDQDVFLNAVGG VKIGEPAADLAVILAMLSSFRNRPLPEKMVAFGEIGLSGEVRPVARGQERLKEAEKLGFK RAIVPKANMPRNEKEFPNLKIFGVSSLQEAIEICRDAEN >gi|257257262|gb|ACDX02000001.1| GENE 130 149490 - 149936 694 148 aa, chain + ## HITS:1 COG:NMA1726 KEGG:ns NR:ns ## COG: NMA1726 COG0691 # Protein_GI_number: 15794619 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: tmRNA-binding protein # Organism: Neisseria meningitidis Z2491 # 1 146 3 148 150 263 91.0 1e-70 MSIANNKKAFHDFFIEDQLEAGLVLEGWEVKAIRAGRVQLKESYIYWKKDAFYLVGCHIT ALPTASTHVKPDPVRPRKLLLKQSEINKLIGKTERAGYTIVPLNLHFTRGKIKMEIGLAK GKKQHDKRQSLKEADWKREKQRLMKNVH >gi|257257262|gb|ACDX02000001.1| GENE 131 150115 - 150453 459 112 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261363745|ref|ZP_05976628.1| ## NR: gi|261363745|ref|ZP_05976628.1| putative membrane protein [Neisseria mucosa ATCC 25996] putative membrane protein [Neisseria mucosa ATCC 25996] # 1 112 1 112 112 197 100.0 2e-49 MSRSSLFLPLFLIIFGAVWFLKTTDILPATSTIVSAGMVVAGIAVLVMDGVNKQSIVSGP LLVYIGAAVYLHNQYWLGYSPLVALGMMVLGCLLLLSRSDMVPYKQHKQQDN >gi|257257262|gb|ACDX02000001.1| GENE 132 150580 - 152145 2337 521 aa, chain + ## HITS:1 COG:NMA0534_2 KEGG:ns NR:ns ## COG: NMA0534_2 COG0519 # Protein_GI_number: 15793529 # Func_class: F Nucleotide transport and metabolism # Function: GMP synthase, PP-ATPase domain/subunit # Organism: Neisseria meningitidis Z2491 # 198 521 1 324 324 664 99.0 0 MTQDKILILDFGSQVTQLIARRVREAHVYCELHSFDMPLDEIKAFNPKGIILSGGPNSVY ESDYQADTGIFDLGIPVLGICYGMQFMAHHLGGEVQPGNQREFGYAQVKTIDSELTRDIY DDAPNTLDVWMSHGDKVSKLPNGFAVIGDTPSCPIAMMENVEKQFYGIQFHPEVTHTKQG RALLNRFVLDICGAQPSWTMPNYIEEAVAKIREQVGSDEVILGLSGGVDSSVAAALIHRA IGDQLTCVFVDHGLLRLNEGKMVMDMFARNLGVKVIHVDAEEQFMAKLAGVTDPEKKRKI IGAEFIEVFDAEEKKLTNAKWLAQGTIYPDVIESAGAKTKKAHAIKSHHNVGGLPENMKL KLLEPLRDLFKDEVRELGVALGLPREMVYRHPFPGPGLGVRILGEVKKEYADLLRQADDI FIQELRNTTDENGTSWYDLTSQAFAVFLPVKSVGVMGDGRTYDYVVALRAVITSDFMTAH WAELPYSLLGRVSNRIINEVKGINRVVYDVSGKPPATIEWE >gi|257257262|gb|ACDX02000001.1| GENE 133 152486 - 154072 2406 528 aa, chain + ## HITS:1 COG:NMA0722 KEGG:ns NR:ns ## COG: NMA0722 COG1620 # Protein_GI_number: 15793699 # Func_class: C Energy production and conversion # Function: L-lactate permease # Organism: Neisseria meningitidis Z2491 # 1 528 1 528 528 891 94.0 0 MALFLSIFPIILLIWLMVKKNSMPSYIALPITAALIYAIKLFYFNDDAMLLNATAASGLV STLTPITVIFGAIMFNRMMETTGCIDIIRKWLATISPNPVAQLMIIGWAFAFMIEGASGF GTPAAIAAPILMSLGFNPLKVAIFTLVMNSVPVSFGAVGTPTWFGFAPLNLSAENILAIG RQTGVMHFFAGFIIPVIGLSFIVPWSEIRKNLGFIGIAVFSCTIPYVALAMVNEEFPSLV AGAIGLMVSVFAANHGWGLGKDHPKDPNAEKVPFAQVAKALAPLGMLIGMLVVTRIKQLG IKGLLTSKEEWFSFQLPFDLSKITVSDSLTITFGNIFGQGVSASYQTLYVPAWIPFVFTV WICILLYKTKFKDAWAFYAATFNQTKKPLLALMGALIMVQLMMVGGDNSMVKIIGKEFAA MAGEHWVYFSPYLGAIGAFFSGSNTVSNLTFGPIQQQIAIDTGLSVTLILALQSVGGAMG NMVCINNIIAVCTVLDVKNAEGAIIKKTVIPMAIYGVIAVAIAAIFFM >gi|257257262|gb|ACDX02000001.1| GENE 134 154203 - 154847 733 214 aa, chain + ## HITS:1 COG:NMB0630 KEGG:ns NR:ns ## COG: NMB0630 COG0118 # Protein_GI_number: 15676532 # Func_class: E Amino acid transport and metabolism # Function: Glutamine amidotransferase # Organism: Neisseria meningitidis MC58 # 1 212 1 212 212 347 74.0 1e-95 MKTAIVDYGMGNLHSVLKSVQAAQALSGKAAEIYLTARPEDILAADKIIFPGQGAMPDCM AALRQSGLGEAVEDSLKNKPFFGICVGAQLLFEHSEEGDTVGLGWFKGRVKRFAANQTDA HGGRLKVPHMGWNTVRQTRPHLLFKDIGQETRFYFVHSYYFAPEDPETVLATSEYPNEFA CIVGKDNVFATQFHTEKSHDAGLLLLRNFLDWTG >gi|257257262|gb|ACDX02000001.1| GENE 135 155009 - 155746 1020 245 aa, chain + ## HITS:1 COG:NMB0629 KEGG:ns NR:ns ## COG: NMB0629 COG0106 # Protein_GI_number: 15676531 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase # Organism: Neisseria meningitidis MC58 # 1 244 1 244 245 439 93.0 1e-123 MLLIPAIDLKEGRCVRLKQGLMEQATVFSDSPAETALHWFKQGARRLHLVDLNGAFAGIP QNFPAIKDILAAVAKDIPVQLGGGIRDLETIEKYLDLGLNDVIIGTAAVKNPDFVREACK SFPGQIIVGLDAKDGMVAIDGWATVTEHHVIDLAKRFEDDGVNSIIYTDIGRDGMMSGVN IDATVKLAQAVAIPVIASGGLTNLDDIRALCAVEKHGVAGAITGRAIYEGSIDFAQAQQL ADSLA >gi|257257262|gb|ACDX02000001.1| GENE 136 156081 - 156398 499 105 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261363750|ref|ZP_05976633.1| ## NR: gi|261363750|ref|ZP_05976633.1| putative cellulose synthase [Neisseria mucosa ATCC 25996] putative cellulose synthase [Neisseria mucosa ATCC 25996] # 1 105 1 105 105 176 100.0 6e-43 MFEAFILGFWIIWSSGRNVRAVSEGLGFTIIAILVRQLSAFDMPMIDTYWMVFNGALWAF ASAVFYIVGRFSGNFMTSCVFAAIAGVGYFQLLQHLPKWVHNWLA >gi|257257262|gb|ACDX02000001.1| GENE 137 156543 - 157310 1180 255 aa, chain + ## HITS:1 COG:NMA0838 KEGG:ns NR:ns ## COG: NMA0838 COG0107 # Protein_GI_number: 15793808 # Func_class: E Amino acid transport and metabolism # Function: Imidazoleglycerol-phosphate synthase # Organism: Neisseria meningitidis Z2491 # 1 255 1 255 255 431 89.0 1e-121 MALAKRIIPCLDVKDGRVVKGVNFLGLRDAGNPVDVAKRYNDEGADELTFLDITASSDNR DTILHVIEDVASQVFIPLTVGGGVRTVADIRRLLNAGADKASINTAAVTNPDLVNEAAGF FGSQAIVVAVDAKAVNPENTRWEIFTHGGRTPTGLDAVEWAVEMQRRGAGEILLTSMDRD GTKQGFNLPLTRAISEAVDIPVIASGGVGNVQHLIDGIKEGKADAVLAASIFHFGEVSIR DAKLAMREAGIEVRL >gi|257257262|gb|ACDX02000001.1| GENE 138 157434 - 157832 537 132 aa, chain + ## HITS:1 COG:NMA0837 KEGG:ns NR:ns ## COG: NMA0837 COG0139 # Protein_GI_number: 15793807 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosyl-AMP cyclohydrolase # Organism: Neisseria meningitidis Z2491 # 1 131 1 131 131 233 88.0 7e-62 MDNNLLEAVKFDEKGLVCAIAQDRLTRRVLMVAWMNAEALQKTVETGFAHYYSRSRQKQW MKGEESGHTQKVYELRLDCDGDAIVMLIDQNGGIACHTGRESCFYKVWKDSAWQTVDAVL KDEEAIYGHTHP >gi|257257262|gb|ACDX02000001.1| GENE 139 157973 - 158296 488 107 aa, chain + ## HITS:1 COG:NMA0807 KEGG:ns NR:ns ## COG: NMA0807 COG0140 # Protein_GI_number: 15793781 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosyl-ATP pyrophosphohydrolase # Organism: Neisseria meningitidis Z2491 # 1 107 1 107 107 150 75.0 7e-37 MTDTILTQIQNTIDSRKGGDPEASYVAQLLYKGEDKILKKVIEEAGEVLMASKDGGGEHL VYEVADLWFHTMVLLAHHGLRAEDVVNELARRQGLSGLAEKASRKES >gi|257257262|gb|ACDX02000001.1| GENE 140 158410 - 158733 451 107 aa, chain + ## HITS:1 COG:NMB0602 KEGG:ns NR:ns ## COG: NMB0602 COG0537 # Protein_GI_number: 15676506 # Func_class: F Nucleotide transport and metabolism; G Carbohydrate transport and metabolism; R General function prediction only # Function: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases # Organism: Neisseria meningitidis MC58 # 1 106 1 106 107 195 93.0 2e-50 MDNCIFCKIAAKDIPAQTVYEDDEMLCFKDIRPAAPVHLLLIPKVHFDSLAHAAPEHQTL LGKMMLKVPQIAEAAGLTDGFKTLINTGKGGGQEVFHLHIHIMGTPA >gi|257257262|gb|ACDX02000001.1| GENE 141 158779 - 158973 375 64 aa, chain + ## HITS:1 COG:NMA0805 KEGG:ns NR:ns ## COG: NMA0805 COG1826 # Protein_GI_number: 15793779 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Sec-independent protein secretion pathway components # Organism: Neisseria meningitidis Z2491 # 1 64 1 67 67 82 89.0 1e-16 MGSFSLWHWIIVLIIVVLVFGTKKLRNVGKDLGGAVHDFKQGLNEGTDAKKDEVIEHKKD EDKA >gi|257257262|gb|ACDX02000001.1| GENE 142 158977 - 159651 877 224 aa, chain + ## HITS:1 COG:NMB0600 KEGG:ns NR:ns ## COG: NMB0600 COG1826 # Protein_GI_number: 15676505 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Sec-independent protein secretion pathway components # Organism: Neisseria meningitidis MC58 # 1 223 1 227 228 296 72.0 1e-80 MFDFGLGELLLVGIVALIVLGPERLPEAARTAGRLIGKLQRLVSSVKQEFNTQVELEELR KAKQEFEAAAAQVRDSLKETGTDMQDNLHDISDGLKPWERLPAQRTPADFGLDEHGNPLP SLSAEVSDDPAVYTSSENAMAQAYIPTDAVETDTPAESEQDRAWREYLTGSAAPVSNVVE VSYIDTSADAPMLHITSLKKQAMNRKRDLRPKFHAKPKLRVRKK >gi|257257262|gb|ACDX02000001.1| GENE 143 159660 - 160436 1029 258 aa, chain + ## HITS:1 COG:NMB0599 KEGG:ns NR:ns ## COG: NMB0599 COG0805 # Protein_GI_number: 15676504 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Sec-independent protein secretion pathway component TatC # Organism: Neisseria meningitidis MC58 # 1 252 1 253 256 385 87.0 1e-107 MSEPQNEQPVQPLIEHLIELRRRLMWIVIGIVVCFLGMMPFAQQLYTFVADPLMANLPKD TSMIATDVIAPFFVPVKVALMAAFLVSLPHTLYQIWAFVAPALYQNEKRLITPLVLSSVS LFFVGMAFAYYLVFPVIFKFLAGITPVGVNMATDIDKYLSFILGMFVAFGTTFEVPVVVV LLAKIGIVTTKQLKNARPYVIVGAFVIAAIITPPDVISQTLLAVPLILLYEAGIWCSRFV KPKSDETDEHPPLPPAET >gi|257257262|gb|ACDX02000001.1| GENE 144 160594 - 160878 500 94 aa, chain + ## HITS:1 COG:no KEGG:NMC1683 NR:ns ## KEGG: NMC1683 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 93 1 93 94 129 73.0 3e-29 MKKLLLTAIVALSATVAGANDYIEHQIYSDRNFEQNRAKAIRMLEQRGYRVHDIDADDYR GRPVLDVEAYKGGREYDIKLSYPDLRIIKERIDY >gi|257257262|gb|ACDX02000001.1| GENE 145 161100 - 163049 2541 649 aa, chain + ## HITS:1 COG:no KEGG:CAP2UW1_2831 NR:ns ## KEGG: CAP2UW1_2831 # Name: not_defined # Def: hypothetical protein # Organism: A.phosphatis # Pathway: not_defined # 355 646 12 304 308 162 33.0 5e-38 MDFHDKNKKGQEPQVSDWEKPFERPDPDAPQPVSEVWEGTDETLHGDEETLKTEELAKIE EAVKAEETLKVEEAVESETADHQQGDNPEELTPKNIIIEGIGTSSEKAKKKKKDKKDKAK KKNQAADVPPSDLLGTNKGVETMFRNAVRSEMELLALAATKANIMISLNGFIVSALMISG AFIFSSSPEFLIPASTFMITAAASIVFALLSASPDRIGKMQAARTWIKDFFRGRAKLRDL KTRLSSTQTRFFSGSQPNILIYEDRVKVQKEQYWEMMQEIMGDRKQVYQKMSDHLYWLGL LADKQFKYINLSYAVFRWGLLASLAAFIGVKTLPSLLTKPASNAAELRALGINMFNGVYE PSAVQQLPDGKLLIAEDEPNHAFSIVSIDPSGRFIEDEALDTRVITGFKRRLSDLEALAR DDEGFIYALTSHSRTRKGNRSPDREHLMRFKIQDGNVLGLTSYDNLTQVLETDHKLHDLI RERTKAEVSFEEINIEGMAFDPVKKRLVLGFRDPEFNNMALVAFISNPKDVFERNAKPEF DEVAILDIDGGGIRSINYDPVLKNYVIANEVKDENGQKFSQLWTWSGNPTEEPQKISLPN LQHITNVEAVDSITVNGKPQMIVMGDEGNASQKITAKYMVVDYSQFGKQ >gi|257257262|gb|ACDX02000001.1| GENE 146 163562 - 164215 632 217 aa, chain + ## HITS:1 COG:NMA0244 KEGG:ns NR:ns ## COG: NMA0244 COG1335 # Protein_GI_number: 15793262 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Neisseria meningitidis Z2491 # 4 201 3 204 211 124 38.0 1e-28 MTTVAIDIQPQFRFTCMAANANYFLHQPENMVKELNRQAAIADKRILVENVNIDPESICA AVVKRNGIMFARESGYFSQCAGGCRGANLLDGLPASADYDHVIELGGENGFGACFHDDNE ARSTGLIEWLYAQKADTVIIGGLATEEAISRTAEQLLWYNDSLHIIVNLAACHGYAPEST IQTVYKMRKSGISVVSNAEEIPEQMLRYANEAWFKVS >gi|257257262|gb|ACDX02000001.1| GENE 147 164880 - 166217 1197 445 aa, chain + ## HITS:1 COG:NMA1961 KEGG:ns NR:ns ## COG: NMA1961 COG0733 # Protein_GI_number: 15794844 # Func_class: R General function prediction only # Function: Na+-dependent transporters of the SNF family # Organism: Neisseria meningitidis Z2491 # 1 445 1 445 445 692 86.0 0 MNHSVSWSSKLGFVLAAAGSAIGLGAIWKFPYTAGTNGGAVFFLLFLLFTILVALPVQLA EFYIGRTGGKNAIDSFKTLRPGSQWPWVGRMGVAACFILLSFYSVVGGWVLNYVVHSFTG EIHAGADFEALFGATISSPAGSLFYQGLFMLITIWVVQGGVSDGIEKANRYLMPGLFILF IVLAVRSLTLPGAMEGVSFLLKPDWSHLKPQTMLTALGQAFFALSIGVSAMITYASYLGK DQDMFRSGNIIMWMNLLVSLLAGLVIFPAVFAFGFEPSQGPGLIFVVLPAVFMKMPLGQI LFAVFMLLVVFATLTSAFSMLETVIAATIRQDEGKRSRHTWLIGTAIFIVGIPSALSFGV WGDFKIFGKTVFDLWDYLISAVIMPIGALSVAVFTAWIQDRESVLANAGAGSSVPQTIIR LWLMVLRYVAPLAIVVVFVNSLGLI >gi|257257262|gb|ACDX02000001.1| GENE 148 166337 - 167452 1567 371 aa, chain - ## HITS:1 COG:SMa1188 KEGG:ns NR:ns ## COG: SMa1188 COG1477 # Protein_GI_number: 16263101 # Func_class: H Coenzyme transport and metabolism # Function: Membrane-associated lipoprotein involved in thiamine biosynthesis # Organism: Sinorhizobium meliloti # 37 350 1 309 334 236 45.0 4e-62 MVVRLKRLPYTLTHKLSQTDFHSIPPLHFSDDPSQAMNTPLTRRRFFAIAALTAAGATAP FLLNRNRPAPLPATGEPVIWKGIALGSGAELRLFGVDRKEAEILVNKVLAEVARLEKIFS LYREDSLINRLNKEGRLNNPPPDFLALLSICRDIHALTDGAFDPTVQVLWNLYADHFRRH PRAETPPSEPDIRRTLKLVGFKHVVFDQKAILFEQKGMGLSLNGIAQGYITDKITALLQQ HGIRQALVDMGEIRGFDTDNQRTWNVGIRNPQNEEATLLTLPMQNQAFATSGGYGTVMDE AGKFTHLFDPRTGTATPRYRSVSVMAPTAAVADAFSTAFSIMDEAAIRTAARAKQAKVWL VMPDNRIETLA >gi|257257262|gb|ACDX02000001.1| GENE 149 167586 - 168662 1729 358 aa, chain - ## HITS:1 COG:NMB1686 KEGG:ns NR:ns ## COG: NMB1686 COG0216 # Protein_GI_number: 15677534 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor A # Organism: Neisseria meningitidis MC58 # 1 358 1 358 358 627 98.0 1e-180 MKPSILEKLQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQLAQS DLADAEEMLSDPEMKDFATEEIEAAKAKIDTLDTELQKLLLPKDADDDKNIFIEVRAGTG GDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESG GHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKT DSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGS GDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMDGDLEEITNALIAEHQAELLAAMGD >gi|257257262|gb|ACDX02000001.1| GENE 150 168801 - 169487 1160 228 aa, chain - ## HITS:1 COG:NMB1947 KEGG:ns NR:ns ## COG: NMB1947 COG2011 # Protein_GI_number: 15677777 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, permease component # Organism: Neisseria meningitidis MC58 # 1 228 1 228 228 309 94.0 3e-84 MADLTFEQAVSTIVGMKDEIVRALGETFVMVGLSTTIAVIFGTLLGVLLFVTSNRQLHYN KPVNFLLDNLVNLMRAFPFVILMIAMIPATRAIVGSTIGPIAASLVLSVSGLFYFARLVE QNLREVPKGVIEAATAMGASPLAIVRKVLLNEARAGMVSSITVLAIGLLSYSAAAGMIGG GGLGDLAIRYGYYRYQTEVIIFIVAILVLLVILIQSIGNALARKLDKR >gi|257257262|gb|ACDX02000001.1| GENE 151 169489 - 170226 389 245 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 1 236 11 259 329 154 37 3e-36 MIILDNVSKHYQTRDKTRFAAVEPTSLEIQDGEIFGLMGYSGAGKSTLLRLINLLERPDS GKVNVCGQELTALDPAALRQARQNIGMVFQQFNLLSNRTVADNVAFPLEIAGWSSEKIKE RVKECLEIVGLTERADHYPAQLSGGQKQRVGIARALAPNPQVILADEPTSALDPATTRSV LECLEDINKRFNVTIVIVTHEMSVIRRLCDRAALLDKGKVVEIVEVRGNQIHAQSEIGRE LIRED >gi|257257262|gb|ACDX02000001.1| GENE 152 170454 - 170654 305 66 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261363766|ref|ZP_05976649.1| ## NR: gi|261363766|ref|ZP_05976649.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 66 1 66 66 98 100.0 1e-19 MNEQTKQAAQTIGRLKRKASDEERLQGWRETCAEQGLSGEFILTAKLNGAAYTEEEAHMV AELFGK >gi|257257262|gb|ACDX02000001.1| GENE 153 170729 - 172150 1913 473 aa, chain - ## HITS:1 COG:NMA2108 KEGG:ns NR:ns ## COG: NMA2108 COG0635 # Protein_GI_number: 15794982 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Neisseria meningitidis Z2491 # 1 473 1 473 473 910 92.0 0 MKVIPIQNNHNRNNDKPEFDRELIASLPSSGPRYTSYPTADRFHDGFREAEYINALNQRS MGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADAYIEYLEKEMELLAPHLGGRHQ LAQLHFGGGTPTFLSDDQIERVFRMIRKHFQLIPSGEYSIEIDPRKVSRETVLMLGKLGF NRMSVGIQDFDPKVQEAVNRIQSYDETKEVIDAAREAGFKSVSVDLIYGLPHQTAESIKT TIDTVLSLDPDRLALYHYAHLPHIFKPQRRIDTEAVPGSEEKLDMLQYCVQTLTERGYVF IGMDHFAKPDDELSIALKEGFLQRNFQGYSTYADCDLVAIGVSSIGKIGSTYSQNERDIN AYYAALDAGHLPIMRGYQLNQDDLLRRNIIQDLMCRFALDYQIYESVFGIPFDRYFKDEL ADLEQLASLGLVRLKPHGLTVTPKGRFLIRNIAMVFDYHLRHKETKAQYSQTV >gi|257257262|gb|ACDX02000001.1| GENE 154 172296 - 173030 771 244 aa, chain + ## HITS:1 COG:NMA2107 KEGG:ns NR:ns ## COG: NMA2107 COG0664 # Protein_GI_number: 15794981 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Neisseria meningitidis Z2491 # 1 244 1 244 244 440 91.0 1e-124 MTTHNAMHQMKTLCSSCSLRELCLPVGLLPNEFAQLDAVIRQSRRLKKGEYLFRTGEPFA SLFAIRAGFFKTTVASQDGRDQVTGFFMSGELIGMDGICSHVHSCDAVALEDSEVCELPF SHIEELGHNIPSLRSHFFRLMSREIVRDQGVMLLLGNMRAEERLAAFLLNLSQRLYSRGF AANDFILRMSREEIGSYLGLKLETVSRTLSKFHHEGLISVEHKHIKILDSQTLKKMVSGC SHAI >gi|257257262|gb|ACDX02000001.1| GENE 155 173103 - 173552 281 149 aa, chain - ## HITS:1 COG:no KEGG:Ndas_4801 NR:ns ## KEGG: Ndas_4801 # Name: not_defined # Def: polyketide cyclase/dehydrase # Organism: N.dassonvillei # Pathway: not_defined # 3 139 26 164 170 77 35.0 2e-13 MLTYTLSVRLDAPLEPIFRYCTSRHGFACQFPFDVQWLSEKEYWARGDILDFRYRVCGIW LRHRAEIISLEPNQSFTDLMLKGIYRSFRHTHEFNFSGGRTCVTDTVEFTFGLGKMIDRL IGLPTLRRTFKKRHRLLKEWADYAEDATS >gi|257257262|gb|ACDX02000001.1| GENE 156 173827 - 175182 476 451 aa, chain - ## HITS:1 COG:no KEGG:Arad_4108 NR:ns ## KEGG: Arad_4108 # Name: not_defined # Def: hypothetical protein # Organism: A.radiobacter # Pathway: not_defined # 1 125 18 136 334 91 41.0 9e-17 MDKGNKPNRLLWILGIAAVAAFLIILGLYIAYFKNLSVTNDSATWGTFGDYLGGTLNPII SFLALIGLLYTIHQQAQEMKATRDELERTAEQQSRQSEIFNLQQFESTFFSLLEQHNKVV ERIEVKSIYEELHNIYNTKIDQITTRKPSEELSNSHAIKSINQHYELKSYFNLLFQILKF ISINLSKNSESNNSEDSKITTKDFYSDSKISKDKISQKYINPQERMYSDILRSFIPSIIL KLLALNCLTIDKFSQDYELKTLYNFQGLLNRYALLEQLQLVFTDINKINKSYLVNGDDAI HFLILTSHADIAPAFGNNKIFDKSKAVFNYKFNYWLTVKTKFLHDKQYELKNIKRKIIRL EPMLCEEYKMLDISERDELLLLPEGQYYFRQPDNNFNAWKQEYLEKLENEKKYYEEKINE INTELKRIEENKKAWLEFLQIEDNKAIYSIS >gi|257257262|gb|ACDX02000001.1| GENE 157 175344 - 177815 3279 823 aa, chain - ## HITS:1 COG:NMA0865 KEGG:ns NR:ns ## COG: NMA0865 COG0272 # Protein_GI_number: 15793834 # Func_class: L Replication, recombination and repair # Function: NAD-dependent DNA ligase (contains BRCT domain type II) # Organism: Neisseria meningitidis Z2491 # 5 823 27 841 841 1449 90.0 0 MNQTAQHIRHLTDLLNRYAYEYYTLDAPSVPDAEYDKLFRELEALERNHPELKLPDSPTQ RVGGEPLAGFDEVRHEVPMLSLTNAFSPQDENGVFDHAEMYAFDQRVRDGLDGSKPEYVI EPKFDGLAISLLYRDGVLVQAATRGDGTTGEDVTQNVKTVANIPLRLHGENTPELIEVRG EVLMQKADFAALNKRQAKNGQKPFANPRNAAAGSLRQLDSRITAQRKLHFFPYSVARQQG GFVAEEHIQELTYFQELGFSLPYGNFGYFKNIDEVLAFYEQMQQKRPELPYEIDGMVVKV NSLAQQRELGFISRAPRWAIAHKFPAEEALTVVEAIDVQIGRTGAVTPVARLQPVFVGGV TVTNATLHNQDEVSRKDVRVGDTVVVRRAGDVIPEVVRVIFERRPMQETAVAVSDDLKQQ QDDLFAETPSANQTQSVPLHKPYRLPTHCPICRSEIEREEGEAVARCSGGMLCQAQRAQG LIHFASRKAMDIDGLGQKQIEQLVAQDLVRHFADLYRLDIPTLQKMKEMADKASSENENG DAETVSGDLSEPNTQTGKKQPTKWAENILAGIEASKTPELARFLFALGIRHVGERTAKTL AQAFGSLEHVRRAPEPILACLPDIGTVVARSIAHFFAQDAQQAMIDELLAAGVVPQTQTV TIPPARHAEPQHWIARLPGFKISENKAQALWELAGKSIEGLQTDKALPADWQTWRSEAQN TALLENLKTFFAQTSSKNQDEAFSDGLNEAVAGKTFVLTGTLPTLKRDQAQALIEAAGGK VSGSVSKKTDYVVAGEAAGSKLEKANALGVAVLSEEELLAMLG >gi|257257262|gb|ACDX02000001.1| GENE 158 177953 - 179209 1943 418 aa, chain - ## HITS:1 COG:no KEGG:NMCC_0620 NR:ns ## KEGG: NMCC_0620 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_053442 # Pathway: not_defined # 1 418 4 431 431 583 69.0 1e-165 MIFIVLGLAVILAVIAYNMYQENQYRKQVREQFGHSDKDALLNSKTSHVRDGKESGGKGL FVKKANKAQEAALRNLQEQDEIFAAKAKLAKPSAIKTDVELAMEDDFTDEPVQHTVIGLN NEITTQAASDEPVNLPSAANQPLVSLDELSQVELPWFDPRFDYLAYIALSEAQELHALPR LSNRHRFQIIGCTMDDRFQVAEPIPSVYYQGFVVGLQAVSRNGLATQEELQQFNQQVDTF AQLMGGKVLHTDLAAFTEVAQALDTFCARVDQTIAIHLVSHSNISGVELRASVENLGFVL GEDGAFHYTGQTGSPMFAIHSLTGDAFTNALLDNQSYKGFSMLLDIPHAPAGEKTFDLFM DLAVRLSGQLGLDLVNDKMEEVSTQWLKDIRNYVLARQEEMLKVGIKPGSKQALRLFS >gi|257257262|gb|ACDX02000001.1| GENE 159 179447 - 180019 473 190 aa, chain - ## HITS:1 COG:NMA0867 KEGG:ns NR:ns ## COG: NMA0867 COG3023 # Protein_GI_number: 15793836 # Func_class: V Defense mechanisms # Function: Negative regulator of beta-lactamase expression # Organism: Neisseria meningitidis Z2491 # 12 190 9 187 190 305 79.0 4e-83 MNLPSECKDIDWQQGWWQPARRAFSPNFEPRAESETVSLVVLHNISLPPFEYGTGAVEKL FTNRIDPDEHPFFSVIHTLRVSSHFLITREGEAVQFVSCDDMAYHAGVSSFRGREKCNAF SVGIELEGCDFEPFTEAQYQTLETLLKALVGHYPITAVTGHQDIAPDRKTDPGHFFDWQR LRAAGFPVIR >gi|257257262|gb|ACDX02000001.1| GENE 160 180149 - 181144 1173 331 aa, chain + ## HITS:1 COG:NMB0669 KEGG:ns NR:ns ## COG: NMB0669 COG1559 # Protein_GI_number: 15676567 # Func_class: R General function prediction only # Function: Predicted periplasmic solute-binding protein # Organism: Neisseria meningitidis MC58 # 1 331 1 331 331 551 79.0 1e-157 MLKKMLKWFAVFFVAVAAVFAALLFVPKDNGKAYRIKISKNQGISSISRTLAEDGIVYNR HVLVAAAYMIGAHNKLNAGSYRLPSNISAWGILQKIRNGRPDAVTVQIVEGSRFATMRKI IDNTPDIEHKTRGWSDAELMQAIAPDALSSNPEGQFFPDSYEIDAGSSDLQIYQTAYQTM QRRLKDAWEDRESGLPYKNPYEMLIMASLIEKETAHEDDRAHVASVFVNRLNIGMRLQTD PTVIYGMGSAYKGKIRKADLQRDTPYNTYTRSGLTPTPIALPSKAALEAAAHPSNEKYLY FVSKMDGTGLSQFSHNLEEHNAAVRKYILKK >gi|257257262|gb|ACDX02000001.1| GENE 161 181225 - 182925 2270 566 aa, chain - ## HITS:1 COG:NMB0842 KEGG:ns NR:ns ## COG: NMB0842 COG0608 # Protein_GI_number: 15676738 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-specific exonuclease # Organism: Neisseria meningitidis MC58 # 1 566 1 566 566 1100 94.0 0 MPVKIQTRPINQNVLDDLLTAGADPLIARLCASRDVQSPAELDDKLAGLLPYQSLTHCEA AARRLADAIQRKEKILIVADYDADGATACSVGMSGLAAMGAAVDFLVPNRFEHGYGLTPE LAEIAAAQGVDLLITVDNGIASIAGVARAQELGLDVIVTDHHLPAETVPDCIIVNPNQKG CGFPSKSLAGVGVIFYVLMALRAELRRRDYFSDGLKEPNLGELLDLVALGTVADVVPLDH NNRILVSQGLKRMRSGKMRPGIRALFEVARRDWRKAQPFDMGFALGPRINAAGRLDDMSV GIACLLARDDAEAQTLAAQLNDLNIERREIEQSMLQDALNAFPETLPSGQTTLVAYRDDF HQGVVGIVASRLKDRFYRPTIVFAPADNGEVRGSGRSIPNLHLRDALDLVSKRHPDLILK FGGHAMAAGLSILEHNIPAFQTAFEEAVREMVCEDDLSQTFITDGSLKACDITLEQAQNL ARHVWGQGFAPPSFTDEFHVVRQQPLGAEGKHKKVWLQKDGYEFEAMFWRCSEDIPEYIR TVYRPVANEWRNQMELQLYIDYWEAA >gi|257257262|gb|ACDX02000001.1| GENE 162 183452 - 183814 272 120 aa, chain + ## HITS:1 COG:XF0907 KEGG:ns NR:ns ## COG: XF0907 COG0741 # Protein_GI_number: 15837509 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Xylella fastidiosa 9a5c # 3 68 224 294 297 72 52.0 2e-13 MLYDPEQNIIAGTRYLRYLSQMFRGNIDLILAGYNAGPGAVQKYSGIPPYAETRAYVKNV KYRYAKLSGNPAYTHTDSGTLMKAAYKPKPVPASVQPAVQTAVYAQRQKQYAEWDIFQEF >gi|257257262|gb|ACDX02000001.1| GENE 163 183884 - 184234 296 116 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|288575283|ref|ZP_05976660.2| ## NR: gi|288575283|ref|ZP_05976660.2| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 116 16 131 131 186 100.0 4e-46 MNEIQQQQTGHIAGKPASVGKWAYLLPLAAFALLFAVDAYAAGGGGLSKLNSEGKDWSKN IYIFIGTCATLYLLFAGVRIWSNKGSWSDFGEACLKVIVVAAVPTLVTYLWSLYGS >gi|257257262|gb|ACDX02000001.1| GENE 164 184244 - 184645 156 133 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261363778|ref|ZP_05976661.1| ## NR: gi|261363778|ref|ZP_05976661.1| putative TrwM protein [Neisseria mucosa ATCC 25996] putative TrwM protein [Neisseria mucosa ATCC 25996] # 1 133 1 133 133 226 100.0 4e-58 MGNNDFIDVDTDLPSYKALEREATFLGMPMVPVVMSIGLPLLITMMLLPFFQAKAFLLLL FPLPVLAFIYTQTQQDDKALRIIGLSTLSVLRRRNYRLFGKTNTVLGSKYGRQRDDYKRF FEQDSKAATRSGR >gi|257257262|gb|ACDX02000001.1| GENE 165 184587 - 187004 1653 805 aa, chain + ## HITS:1 COG:SMa1315 KEGG:ns NR:ns ## COG: SMa1315 COG3451 # Protein_GI_number: 16263169 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirB4 components # Organism: Sinorhizobium meliloti # 7 789 4 789 792 363 32.0 1e-100 MITNDFLSKILKRQRGQEDSLPRYKQHISENVVLLENNRVAFTFRLEGRHFEGVNDRNIV LQYLNLNQTLAAVGKEKGSRLALWLTHHRKRIDLNREYSFNTLFTQTFYERYMEKIRQDR YFENIYYITCVLKYEDIDDAVAEAEELIAKLREHLEEYDPYVLKVYKNSKGILFSEFYEF IGMLCNGTYEPIPLGTANAYRTIPSANLHFGAELLEMRSSDKTRYATLYDLKEFGQTKPK MLTDTLSLPCEFVFTQSFTYIRQATMMKKIDDQLNKLESVDDQATFQHDELTEAKGHMAS GELMFGDYHGALVVFGDTPKEAYSNGQTVSARFLNTGGFRFVRASLSAEFTFFSQFPAAS VKPRPFPKATTNLAASFPMFNYAHGKSRGNPLGDGSAVMPLKTDGGTLYDFNFHYTDPKE IVVNGEYPAGHTLILGKTGTGKTVTVAALLSFAERFNPFIFAMDKDKGLEIFIRAIGGTY FALDAGVPTGLNPFQWPDSPRLRDFLYDLVGSCVRQGHKENTAEETKQIQMAVDTVMNLD FQHRRMGALLHSIPPSSEENSLLTRLEIWCGKGRFGWCFDNPSNLFNPDEFFRVGFDLTD ILKTNYRPTEPLLACLFYMKNIMLDRVAKTRSALFTVVEEFWLPASYPTTARFILDGLKT DRKLGGLLVLPTQSPKDAINSPIFDTVVEQTVTKILLPNPAAEYEGNYSRIGLTEKEFRE MARLGEKSRTFLVKQNMGSSLSKLNLQGMDEEIAVLSGNAANVHIMHEAMKSCGSEKPDD WLPVFQQMRREAHARQKQVESLTAV >gi|257257262|gb|ACDX02000001.1| GENE 166 187095 - 187757 596 220 aa, chain + ## HITS:1 COG:no KEGG:TEQUI_0132 NR:ns ## KEGG: TEQUI_0132 # Name: not_defined # Def: minor pilin of type IV secretion complex, VirB5 # Organism: T.equigenitalis # Pathway: Bacterial secretion system [PATH:teq03070] # 28 206 21 200 209 87 31.0 5e-16 MKSKFRQSAAAAVLSAVLALGTTVPAVAGGIPTYDGAAVAQAIKQGVQMKQQIDNQLDQI KQLKEQVKALTGSRNLGQIAKNDLLNQVPDEWKGIYRDMKDKNYKSLTDKSAYKTDGHRQ SLVDTYNHAYEAIVNTQTRVKELNDLMRQINLTQDAKAAADLQNRIAITQGQIANSQVAL DLADRLAKQEEKIRAAQQQNIISCQITAKSKADRKACGTI >gi|257257262|gb|ACDX02000001.1| GENE 167 187828 - 188802 573 324 aa, chain + ## HITS:1 COG:XFa0011 KEGG:ns NR:ns ## COG: XFa0011 COG3704 # Protein_GI_number: 10956722 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirB6 components # Organism: Xylella fastidiosa 9a5c # 1 291 5 298 348 81 26.0 2e-15 MAEKSTFFVDMTQFITDNMGSNLFDTASNLISNVAPVFSTMFGIYLLMIMVSYWSGGGMD EMFVDFLKRMITMTFLVTLAFNASYYAELANLIYVLPDDLAKALSNTDYAGGALDKVMDD TNAAVETLELQKNKLDFYEAGSILTYVIAIWQLKIAMMILLGVMFAYYILAKVSLAMILM IGPVFIGFGMFPATRQYAMNWVGQCLNYIFNVVLLAVIGSMMLKFTSTFIDLVGVDNIGA ALATGAVLLFTLIVFVLLIWMTPQISSALTGGSALQGAMRTVYSMARQSLSKAGYGANKA KGYAGKKYNALKDKLRGNGIKPGR >gi|257257262|gb|ACDX02000001.1| GENE 168 188824 - 189264 291 146 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261363782|ref|ZP_05976665.1| ## NR: gi|261363782|ref|ZP_05976665.1| putative inner-membrane translocator [Neisseria mucosa ATCC 25996] putative inner-membrane translocator [Neisseria mucosa ATCC 25996] # 1 146 1 146 146 249 100.0 5e-65 MDHNDVRKGILQANMIERNSGLLSAEMTIVPFVAAIFAANAAENSLLGFFLFFVVGISSF VFFLWCSEYRAPRFWMAVFFSGIWAYVTWKFVGFFMPNLPPPSAPFTHTVLHYTFQAVPA IIAFLVTMLNHHVDFEWMDDVFGKAK >gi|257257262|gb|ACDX02000001.1| GENE 169 189276 - 189749 303 157 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261363783|ref|ZP_05976666.1| ## NR: gi|261363783|ref|ZP_05976666.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 157 1 157 157 259 100.0 6e-68 MLFKFKTAAAVSAAAFSMLTGCAELNSGLAQINDALGSVNSTLSGTPTGGQTGGQRLPDK ETATYALRNMQLSKTETGLERMFLLTGEAYNKTSRSISLVISMPIYNKDGFYSHPLIGEV LSIPPHEKTKIHIDGRSQLSKQARVDTSKFEVTVRKY >gi|257257262|gb|ACDX02000001.1| GENE 170 189936 - 190682 679 248 aa, chain + ## HITS:1 COG:BMEII0032 KEGG:ns NR:ns ## COG: BMEII0032 COG3736 # Protein_GI_number: 17988376 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, component VirB8 # Organism: Brucella melitensis # 3 244 1 234 239 140 36.0 3e-33 MKLFGRKKAAEQAAVAHKEEKPKSPYKEGNEFIQAAADFEKSEIDNVKKREKIAWTVTGA AALVAVAAVFTVAAMQPLVRVEPYILLVDSNTGKTNVITTLEHQTVDNDKVLNKHWLGRY VVNREGYDWYTIQDTYDTTIAMSSPQEQARYSKPYQDGVGPDKILKEDFRVKVEIKSISF VGETAQVRFSKTKLPVNPSSGVQPITEHQIATIAYHYDNPPTKEEERDYNPVGFIVDSYQ VEVENVQS >gi|257257262|gb|ACDX02000001.1| GENE 171 190679 - 191506 773 275 aa, chain + ## HITS:1 COG:XFa0013 KEGG:ns NR:ns ## COG: XFa0013 COG3504 # Protein_GI_number: 10956724 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirB9 components # Organism: Xylella fastidiosa 9a5c # 21 274 15 276 278 127 33.0 2e-29 MNMKKAYLLTGLAAGFFAFSAHAAAIPKGAAYDKRIQYVNYNPDNVVVIRAEIGRAVLVQ LAQDERVEGENKAIVAGNTGAWKLKTSSNNIFFKPTTETPETNLLISTNKRTYAFDLRMA GRKQPPTYILRFRYPEEAARLRQAEAQKRQEARRLAAMHSNGRQALSGANYNYWAYGEKM LAPSGMWDDGRFTYLKFDDAREMPTVFKVSPDGTESTVNTHMEQDTLVVHDTSALYYLRL GKKVLGVENRSYDSKGKFNYRGTTVAGAVRMKKGK >gi|257257262|gb|ACDX02000001.1| GENE 172 191510 - 192832 1179 440 aa, chain + ## HITS:1 COG:BMEII0034 KEGG:ns NR:ns ## COG: BMEII0034 COG2948 # Protein_GI_number: 17988378 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirB10 components # Organism: Brucella melitensis # 243 436 69 262 265 192 48.0 2e-48 MNLNPNKQPDEYDDGSQGSIEPFENSLTAQTRHNEDFRPHQNLKDSLPGSEAERGIPQDL SVRKISTMQKVGMLVVGIFGVGLVVAGVARYGQDWFKKEPKPEQFQTASEGGQKHDFGRS QREVLDEKANEMPEVVAASEPEEKKEPETMPQVETPENAPAPAVVEPPPDLRLTSPLTFD EDGGTADRLAAGGADGSAALTQASPYPTAFPDGDSSLGGAGGQSQQKGLAGRLNASVFTP GSAALRGNMDFLLGRTTGISCSLMTRIVTTYPGITKCQVMNDVYSANGKVLLVEKGSVIH GEQQSALTHGQARVFVAWTTIETPNGVSVSIDSLGADPLGGSGHPARINSHFWRRIGGAV MISMVDDTINAYGRRSSNKGSSNNVSFESTTEAAQDIATEVLKNSINIPPTGYVNQGERI MVYVARDVDFSNVYELVHTD >gi|257257262|gb|ACDX02000001.1| GENE 173 192878 - 193975 1129 365 aa, chain + ## HITS:1 COG:XFa0015 KEGG:ns NR:ns ## COG: XFa0015 COG0630 # Protein_GI_number: 10956726 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis # Organism: Xylella fastidiosa 9a5c # 23 354 33 339 347 218 33.0 2e-56 MSEFHNDVTARNLLDKLGVTEKLNRPGITEVLINRSGEMFTEDSSGFTRYESEVLTLDNL KQLGNVLCVFNGKALTVKNPIHSVTLPDGERGHIMMPPSCEDGTMVFAFRKPSSSRFSLN DYLDTGRLQNFSDVSVYGAPERRTTAEIETDSRYVRDVCDKMKLPHDVKLADWQYKMLDY KANGDLSAFFQEAVKRRLNICMVGGTGSGKTTFTKALADLIPAQERLITIEDTHELSLPN HPNHAHLFYKEHITAKMIVAACMRLKPDRIFLTELRGDEAWDYLSALNTGHPGGLTSVHA NDARSVHYRIAQLAMESPAGRSMEHSYILNTVRATIDIVCYFEKTRMTELYFDPVEKYYA MRGRA >gi|257257262|gb|ACDX02000001.1| GENE 174 194044 - 194427 555 127 aa, chain + ## HITS:1 COG:ECs5041 KEGG:ns NR:ns ## COG: ECs5041 COG0629 # Protein_GI_number: 15834295 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Escherichia coli O157:H7 # 4 116 6 121 178 102 42.0 2e-22 MPYVNKIEIMGNLGKDPELRYLSDGKAATKIQVAVSEKWTDKATGAQKEHVEWVPVLLYE RLAETVCRYMKSGDTILVYGKIRTRPYTGRDGIERHITEVIASEMQIIRTREAQDAAVSG GVHDMMR >gi|257257262|gb|ACDX02000001.1| GENE 175 194492 - 196528 2189 678 aa, chain + ## HITS:1 COG:XFa0016 KEGG:ns NR:ns ## COG: XFa0016 COG3505 # Protein_GI_number: 10956727 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirD4 components # Organism: Xylella fastidiosa 9a5c # 6 604 1 563 656 322 33.0 1e-87 MKRNYLAVFGVTGVLTAAAACGGMYLGAVVYTQWLGLKTEPSVMLLPAYWAHSARLPAAM MLPLQVSTALAAAIPLVVSVLSLVAVFAKPRRELHGSARFANRSEIKKTGLLKEKFQPED APDLLVGKYGGQFLRWSSKEFAYLAAPTRSGKGVGIVIPNLLHYRDSVVVYDPKMENFLI TAGFRAKHGQEVFLFNPGGRMPEHERNPNAPLVSHRWNPLTYVRRNPTYTYKDALGVAAI MYPDPVNAGGSAMFFAEAARKLFAGLLMYLIETEPERDLGLLENRTTMANLFRLCAPTNG KTLSEWIRDEIELRSRSPQAALSGNCITLLSDFANGNAKTGADIVATVTAPLGIFIDPVV EAATGGDDFRLDDVRKKRMTVYLGVLPTETAVFARLTNLFFSLLANVNVYQGLPENNPGI LKYQCLMLMDEFTALGVVPAIEHGVSYLAGYNMRLLPIFQTPSQMEKLYQKTGMRTFFTN FGCQIVFPPRDQSDAEEYSRLVGYQTFKAKSSSRSHGKSSSRSNSVSDQKRAVMNPDELK MMPKEDCIISLGSSRPIYAQKIVYWQDPVLSKRANLTLPEVPVLQLDAPKRAAPQAAVKA EYLAPEELDGFHWQDGANAEDFARSILAALVPPGSPPEYVAELVPVVAQNWGGGSLPVIA EILKDTAGIDPADLPQAA >gi|257257262|gb|ACDX02000001.1| GENE 176 196595 - 199012 2574 805 aa, chain + ## HITS:1 COG:RSc2483_1 KEGG:ns NR:ns ## COG: RSc2483_1 COG4643 # Protein_GI_number: 17547202 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 89 381 78 359 359 92 31.0 4e-18 MSNRDEIEKALSYIEPHDRDVWVNTAYSLKHELGEEAFDMWDRWSQQSDSYRSRDARSVW KSIKNPTRTIASLFYDARANGYRPDTPYTPPSAEEQARRQAEAAAAREAAQRQQQENHLR VSKTAQRIWRNAAPASLAHPYLAAKGITDPAVLGGIRQSEYQGVLNLQIPIYRDGTLYNL QSISPDGGKHFLKDGLKSGGYTVVGDAADTARGIVVAEGFATAASIHQATGKPVVVAFDA GNMVTVSETLAKNLPQDIPVTIAVDNDASGTGLAKARQAAALFGDRAKAVQPEFTMTQIQ QFQRENGLDGKGRPKLPSDFNDLHKLAGVAAVRQALDEGANLAPQGDGFAQAAADQMAEW QDRMQTRDSLQRPSENATLDRKGNAMAQQDTPRETPEAAQTNGIEFDGRHIETEKSKPVR GAANQDNDTPRPKQSSGVSDGLTPEQPEQPKKTEKTAREPSAPKGEPGQTDAAALLRGRD KKVVLDLNYDTPDSLKDRYITFEGRLLSPGRQYASPDNPRTVLFTDKGSKLSTAKSDLQT VKDMLEVAKQKGWDSIKIKGGKEFKSLMFVMAESQGIRTSGYSPKPEDLAMVERLRQEYA LNGIENATRQKRRGGVSDGLAPEQERRPSEGQPGRSDDTPVSGKPDAAAISKADKMLAQS GLPSDAVINASHEADTHLGAPMQAIGQGEIRSEAAAAAAQMKAAALQTGYESAKSVYMRK SEKLSKPNKQLLAFHERSMMDAIRGLKGNARTLALKNYYEHTAEKMHGSRLDLPRPMQIP AQAQSPQQQRDTRAQERGNAPEISR >gi|257257262|gb|ACDX02000001.1| GENE 177 199079 - 200701 826 540 aa, chain + ## HITS:1 COG:HI1407 KEGG:ns NR:ns ## COG: HI1407 COG2369 # Protein_GI_number: 16273315 # Func_class: S Function unknown # Function: Uncharacterized protein, homolog of phage Mu protein gp30 # Organism: Haemophilus influenzae # 20 181 278 437 447 96 35.0 1e-19 MTEPNKTTRPSEVSDGLNAVQDAEQTAARSERAPWWDFPPLIRNGTLAEMQSAESYRAAK AGNGKAALALVQSLLTKQTVDAVKEMVGDKTPLIVGIRAEESAGRNRIPAMMAEVLAEHT GWQTDRSLYQVSYAGRTGRDSSYRLAFPAIFGGNVQSGRDYLIVDDNSTMGGTIAGLRGY IENRGGHVLGAVVMSARATGLNIVPTQKQLDEIQRKHGDAPNDYWLQTFGYGIDQLTRGE AGAIRSSPTFDAIRDRIAQARLRELSRVGKRGTAQESHETTRPQHGAERPKVTQGVKPSD SPTQAAAQDAAAFSLSGGTPRPVQEQMMSKAQQLQQTAVDYVLRQKADFMEGGLDFRNMD TAVAAQYGQALAHRTMTGTLSDMLKQNAQAGRTIDARHYFMMQDIKQFEQAGILVSEPNS RNGWDYRFSETGRALTLTLLNHPIRTEKTHQAERPSETRPQAPDPAERLDAAKAQYRART ASMSELEQRWQAMLERSMENLIKGLSPQTQMLARINFYENQIRQPQPERSANQHELKFDR >gi|257257262|gb|ACDX02000001.1| GENE 178 200763 - 201344 628 193 aa, chain + ## HITS:1 COG:no KEGG:Mrad2831_6341 NR:ns ## KEGG: Mrad2831_6341 # Name: not_defined # Def: mobilisation protein # Organism: M.radiotolerans # Pathway: not_defined # 65 180 65 180 184 76 40.0 7e-13 MDGTDANDTAKCPPVRVFGLNTDEQAALRGLARQRFGKASLSLLAKKLLQAELQQPQTVE PLKLPPPKCARRITLRLPDKDRAYLEAAAAVRRGSINDVVRDIIQSHIYQHPMISAHEAD ALYQSNYQLLTIGRNLNQIARRLNAGENASLTGNDIAALKAYIDAHTSKVAAVLQTHRRR KRGHTTRKAAHEP >gi|257257262|gb|ACDX02000001.1| GENE 179 201334 - 202440 1135 368 aa, chain + ## HITS:1 COG:XFa0047_1 KEGG:ns NR:ns ## COG: XFa0047_1 COG3843 # Protein_GI_number: 10956757 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirD2 components (relaxase) # Organism: Xylella fastidiosa 9a5c # 70 294 41 266 279 119 37.0 7e-27 MSLNRHADDWFLGKTRAVYGKKDDLVLGKASKRGGKTSDGRKGGKSARHASPPPLKSGSA LTNLKAAALKHPEVMVKIPKRLSNKSNGMRGIRNHLDYVSRNGEISLETSDGERLEGKKA VRSLLDDWQKLGIPEEGKHKEAVNIVLSMPAGTPPQAVLNAARTFAAEQFGNHQYAFGLH HESEKPGEPAHPHVHLCVLIRDGFGQRLNPRKNDLFEWRVRFAEKLRDEGVLCAATKRQH RGRVQKPEDGIQRAMRQRGALSRTARQQAKELMSALKSSQRPTHPFLKETMQTRGIILEQ YGKIAKELYKMGHKTEARIVGKLAKETAAQPFDTQAQQSYDRLHGNRRAISQMQQRLDEN KPQTDISR >gi|257257262|gb|ACDX02000001.1| GENE 180 202458 - 202949 506 163 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261363794|ref|ZP_05976677.1| ## NR: gi|261363794|ref|ZP_05976677.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 163 1 163 163 317 100.0 1e-85 MNAKEKNIVEIDLNAIVAHLSDTIAFTGQILKELPPSDKASSVGAVIRSDIESLIDILTV GSIGGEDFRHNPAFAQLLSLCGRADTLGGTGEITDSKDFLTALAAKADYGPLISPERECT VRLNDIEQLVVLKAHDFGIENLSEDERHELYRIITALKYCINP >gi|257257262|gb|ACDX02000001.1| GENE 181 203002 - 204594 1372 530 aa, chain + ## HITS:1 COG:mlr8517 KEGG:ns NR:ns ## COG: mlr8517 COG0270 # Protein_GI_number: 13477024 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Mesorhizobium loti # 3 426 17 468 667 301 41.0 2e-81 MRMPKQFTLDLRGKLICDLFAGGGGASCGIEQATGLYVDIAVNHDAQAISMHTANHPQTR HFQTDVFDVDPAQACGGRPVGLLHLSPDCTHHSQAAGGQPRSNAVRSLSWVGKRWAAQVR PEVITLENVKQITRWGRLVAKRDKASGRVIKTDGTIAAAGECVPVRQQYLVPDPKRTGER WQKFVHELEKLGYAVEWRILCAADYGAPTTRERLFMVARRDGLPIVWPEPTHFRRPAKGQ KKWRSAAGCIDWTLAGKSVFDRPKPLAENTLKRIAKGIKKFVLDNPQPFVTGTRAAVLIN AAHGEGSGASRRRGIGSRDITQPVGTVTASGNGGHALACAYLMQANDGFNSTFGRDAAEP LTTITNSGSQQQLISACLIRQFGASTGSDISEPVGTIMSDGGGGKTSLAVCELGSAKERA LRVADFLIRYGEGFSDGLDTEGRLKTVTLHIGGEPYYITDITLRMLEPKELYKAQGFPDS YIYDRDGSGRPLTKTAQVRMCGNSVSPPPMAALIRANYRPEEALDEQQAA >gi|257257262|gb|ACDX02000001.1| GENE 182 204808 - 205182 405 124 aa, chain + ## HITS:1 COG:ECs3240 KEGG:ns NR:ns ## COG: ECs3240 COG1961 # Protein_GI_number: 15832494 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Escherichia coli O157:H7 # 5 104 4 107 208 58 37.0 2e-09 MKTARIYQRVSTQSQSLERQDALIEKAKAEGYYIAGVYREKASGIRADRPVLNRLIDDLQ HGDVIIAEHIDRITRLPLAEAEKLVGRIREKGALLAIPASSTLVRCRPIRTWPKSYWKAY RPCC >gi|257257262|gb|ACDX02000001.1| GENE 183 205122 - 205433 277 103 aa, chain + ## HITS:1 COG:YPMT1.70 KEGG:ns NR:ns ## COG: YPMT1.70 COG1961 # Protein_GI_number: 16082862 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Yersinia pestis # 6 79 114 189 206 67 44.0 9e-12 MQTDSDVAKIVLESIQAMLLKIALQMARDDYEERRKRQAAGIAKAKENGRFKGRSADTGK HRLIVSLREHHTIQETARLPNSPPAKQQPRCNTTAICYKKCPS >gi|257257262|gb|ACDX02000001.1| GENE 184 205708 - 206034 226 108 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261363798|ref|ZP_05976681.1| ## NR: gi|261363798|ref|ZP_05976681.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 108 1 108 108 204 100.0 2e-51 MFESYNDVSRNFYNWCEILEELGGNGNYDDEIWELVRAHNHCPHLGNVRQAVILWNLESE IYALYPSAKVDFYINAIDSHLYINDNIISDMRDFRRITAQYEAENLAA >gi|257257262|gb|ACDX02000001.1| GENE 185 206335 - 206568 286 77 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261363800|ref|ZP_05976683.1| ## NR: gi|261363800|ref|ZP_05976683.1| putative ankyrin repeat protein FPV115 [Neisseria mucosa ATCC 25996] putative ankyrin repeat protein FPV115 [Neisseria mucosa ATCC 25996] # 1 77 1 77 77 154 100.0 3e-36 MTRYTPKEFQDLVHGIAHSYGCIEVVCHIGDKIIIEVGGEKFPLRDKVLDLDRAGVMKIV RYLVNLHCAVFTRDYLA >gi|257257262|gb|ACDX02000001.1| GENE 186 206616 - 207008 329 130 aa, chain - ## HITS:1 COG:no KEGG:Ajs_4298 NR:ns ## KEGG: Ajs_4298 # Name: not_defined # Def: antirestriction protein # Organism: Acidovorax_JS42 # Pathway: not_defined # 2 130 13 143 143 99 40.0 6e-20 MTVVPNSKRPAFLPEKTGAAYLAFETALYGIADNLSRDYDGGYWEFCELSNGGFYCRRDT EDDFDCVSSNGFECRMSADAFGITATLFALNCAMDGQSGATLEKLVDGYYRLRDYAAEHE EATQIFRMID >gi|257257262|gb|ACDX02000001.1| GENE 187 207052 - 207339 273 95 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTRQKPIKNPFAKLTAALDGAYIGWLPPVTAFAPTGNITTVYLKLVIEDSFVFLPKPVQK LVSKFKHNRCLGGMEVYAEVPVAEYRAVLDIFYNK >gi|257257262|gb|ACDX02000001.1| GENE 188 207409 - 207660 371 83 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|288575290|ref|ZP_06393615.1| ## NR: gi|288575290|ref|ZP_06393615.1| hypothetical protein NEIMUCOT_03743 [Neisseria mucosa ATCC 25996] hypothetical protein NEIMUCOT_03743 [Neisseria mucosa ATCC 25996] # 1 83 76 158 158 160 100.0 3e-38 MKTAKLKRARTIAAVITELDTERCNRVYTCCHPFATGAEWIAGHIRKNYFAELKACTVEE ALRHAKRRVVSANGGTAAQWRAM >gi|257257262|gb|ACDX02000001.1| GENE 189 208320 - 208733 325 137 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|288575291|ref|ZP_05976687.2| ## NR: gi|288575291|ref|ZP_05976687.2| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 137 7 143 143 197 100.0 3e-49 MDDLDDFIKEHGHEPKRVNRSVLEPYRDELLKMRKMGFTEKVMLQFLKEKKNLAISQQAL NRFIRSRLNKQEADKKEAEKPVPAIKQAVRENQPANPAHTVKQEANKKDVEKTAPAPKPQ KKKFQWPPKDVSSENLY >gi|257257262|gb|ACDX02000001.1| GENE 190 208792 - 208986 159 64 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|288575292|ref|ZP_05976688.2| ## NR: gi|288575292|ref|ZP_05976688.2| conserved domain protein [Neisseria mucosa ATCC 25996] conserved domain protein [Neisseria mucosa ATCC 25996] # 1 64 10 73 73 120 100.0 3e-26 MHGFCGCDAEAESYDVWFRAKVEKSITDPAPTMPHNEAMAFVDKELKCRKDERLAESIAQ AERS >gi|257257262|gb|ACDX02000001.1| GENE 191 209414 - 210175 542 253 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261363806|ref|ZP_05976689.1| ## NR: gi|261363806|ref|ZP_05976689.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 253 1 253 253 445 100.0 1e-123 MLITEIRPLLSQTFDIVYHEFDALCRGNLPASRLLAYLFGLTEVLENNPKYAVREGWIYK SGRNLWEDLGLTRRGYEKARDYLVDLGLVAYKRAGVHGIMNWRLMKQTLLAKVYALKGKD APDFESGLQQDAQGFHLPKWVPLKEWTAFVAMRLKMGKRLPPQSKKKLLERLETLRNRGI DVRQVMEKAVAAGWAGFYVSERNPPAQAPAASAADTRRELEKQMAERNQPPPPKSDPDSE GRQALLDNLKKLK >gi|257257262|gb|ACDX02000001.1| GENE 192 210191 - 210403 152 70 aa, chain - ## HITS:1 COG:STM0898A KEGG:ns NR:ns ## COG: STM0898A COG1396 # Protein_GI_number: 16764260 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Salmonella typhimurium LT2 # 3 68 6 70 84 64 56.0 4e-11 MNTPLKIARKRKNLTLMQVAELIKSDAGNISRIERGQQTPSKELVEKLVALFKDEGLTEL HILFPERYTD >gi|257257262|gb|ACDX02000001.1| GENE 193 210520 - 211164 212 214 aa, chain + ## HITS:1 COG:no KEGG:AXYL_02046 NR:ns ## KEGG: AXYL_02046 # Name: not_defined # Def: hypothetical protein # Organism: A.xylosoxidans # Pathway: not_defined # 1 213 29 245 245 122 36.0 1e-26 MEIGKIIRQRRKQLNMTQEELALEVNSDAGNLSRVENGKQGIPLDKIELYAKALRCRPAD LLVEETQVSEPPLPLGFIRIPLLDAIQAFNWDKLKSHTGELDISDWLISSADISTDSFGF KIMDFSMMPEFKQGELVIIDPELTPEAGDIVLVATVNRDVLLRKYKQRGISDDGSFIYEL HPLNDDFEILSSTSSELKILGVMVEHRRLRRNRL >gi|257257262|gb|ACDX02000001.1| GENE 194 212039 - 212344 159 101 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|288575299|ref|ZP_05976694.2| ## NR: gi|288575299|ref|ZP_05976694.2| conserved domain protein [Neisseria mucosa ATCC 25996] conserved domain protein [Neisseria mucosa ATCC 25996] # 1 101 1 101 101 189 100.0 6e-47 MVRLLSFGFAFDIDYFRVSYFIQWYNLCDGATDLETDMNTVIKLNPLVYEFDSESEADTY SKWLENEIAQARRAPVISNEEATNRLDANRARLLEKLKNAR >gi|257257262|gb|ACDX02000001.1| GENE 195 212334 - 212606 158 90 aa, chain + ## HITS:1 COG:SMa0473 KEGG:ns NR:ns ## COG: SMa0473 COG3668 # Protein_GI_number: 16262701 # Func_class: R General function prediction only # Function: Plasmid stabilization system protein # Organism: Sinorhizobium meliloti # 1 90 1 91 97 68 41.0 2e-12 MRVEWSEKALNEAESIVNYIFEENPIAALETDDLIRNAIGLLEKMPLAGRYGKVADTREL VINRNYFVVYEIADNRVLILGVKHTRQRYP >gi|257257262|gb|ACDX02000001.1| GENE 196 212956 - 213177 131 73 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261363813|ref|ZP_05976696.1| ## NR: gi|261363813|ref|ZP_05976696.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 73 1 73 73 139 100.0 9e-32 MESKQQTKIILCSDDGVPLRLPEECHCMQVDVPPEVLLQQIHALSKKVGLYRTIKVCFVE EPPEFDTANGKRF >gi|257257262|gb|ACDX02000001.1| GENE 197 213214 - 213717 453 167 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261363814|ref|ZP_05976697.1| ## NR: gi|261363814|ref|ZP_05976697.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 167 1 167 167 333 100.0 3e-90 MYDKFTYNNIPVIPILVSDEYCQKLYRRPDLWLKAASRILVGSTLYAIKVMVSCWVGLSF WVVYLYAKGMLQLPDFSPEVAALMINKFLILAYAALLTDVTIKVIFFRFDIYFGRGNPYE EELYQELSKMHFPPHVVGVGKFFVTAEGEVVYLHGNEDGDKVPGKAV >gi|257257262|gb|ACDX02000001.1| GENE 198 213782 - 213952 180 56 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|288575300|ref|ZP_05976698.2| ## NR: gi|288575300|ref|ZP_05976698.2| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 56 22 77 77 108 100.0 1e-22 MFAKFIRRKAKRCNRGKIRLVHVFDSIQEASLHADSLINSGVCVNIVRTEGNYERY >gi|257257262|gb|ACDX02000001.1| GENE 199 213939 - 214256 181 105 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261363816|ref|ZP_05976699.1| ## NR: gi|261363816|ref|ZP_05976699.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 105 1 105 105 196 100.0 6e-49 MKDIEVCILMNLAEDICEFLELRAGSYIIPHPEFNFPRHDDPEICYVEAGIAKKYQEQFG LYLTKGQFGLEAGFDIAEIAKQFKERFAAYFETLTDDEIYSEYIY >gi|257257262|gb|ACDX02000001.1| GENE 200 214225 - 214590 205 121 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|288575301|ref|ZP_05976700.2| ## NR: gi|288575301|ref|ZP_05976700.2| cytochrome c oxidase subunit 1 [Neisseria mucosa ATCC 25996] cytochrome c oxidase subunit 1 [Neisseria mucosa ATCC 25996] # 2 121 1 120 120 194 100.0 2e-48 MMKFILSTFIDDYGLAKYFLLICTFIVYLAFLALFNIYIYTSKRLLPKFLTSIPLFSLLY LFISMSFMSPYENIPIYGTDMQKTNLKRCTVGKTITLEKIEDIMFDCKKHDLEMELKSIT K >gi|257257262|gb|ACDX02000001.1| GENE 201 214906 - 215130 281 74 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MILKVIFSVCFSMMAMCIIDLIDPSLVGLKLWYALSLVMIWPLYVVDRFNLLQACFLTFI SSLLAFATQHYGNF >gi|257257262|gb|ACDX02000001.1| GENE 202 215213 - 215398 237 61 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|288575300|ref|ZP_05976698.2| ## NR: gi|288575300|ref|ZP_05976698.2| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 53 22 74 77 95 86.0 1e-18 MFANFIRRKAKRCNRGKIRLVHVFDSIQEASLHADSLINSDVCVNIIRDGGQFAVQTVVW Q >gi|257257262|gb|ACDX02000001.1| GENE 203 215504 - 216031 271 175 aa, chain + ## HITS:1 COG:no KEGG:PMIP19 NR:ns ## KEGG: PMIP19 # Name: not_defined # Def: putative conjugal transfer protein # Organism: P.mirabilis # Pathway: not_defined # 4 173 10 182 182 145 42.0 7e-34 MKKVLFLAAALSAAFPVYADDLLTGDAKLACEAVLCLSSAHRPGECNESIRRYFSIRHKK PHKTLRARRDFLNLCPSSREQGMPQLVDALVNGAGRCDARELNRVMRYTVMERQCPRYGR GRFDTDSCPLVPKTYIRPQKPSYCKAYFDHEWTTADEGVEYVGDEKNGGRWVDVR >gi|257257262|gb|ACDX02000001.1| GENE 204 216152 - 217009 846 285 aa, chain + ## HITS:1 COG:no KEGG:Veis_5052 NR:ns ## KEGG: Veis_5052 # Name: not_defined # Def: transfer origin protein, TraL # Organism: V.eiseniae # Pathway: not_defined # 13 256 15 250 250 191 42.0 3e-47 MDNRKVYAMKEAHIIVQGKGGVGKSLTAAFLADYFAAKAKLAAGEKLHYFDTDPVNQTFA RYNAFKPTVVEILTETNNIDSRFFDGLIEKLINEKGIGIVDNGAATFVPLMAYLSENQVP ELLAENGVRLVVHVPVTGGQALDDCMTGLNQTLNGVSAKVVVWLNEFQGKIEKIVENKRK TFTEFAVYESHKDDIIGIVTLPQRNPDTFGADIRAITSQNMSLTQAVESKELGIMPRQRI KTVQKDLYEQLDKIPFLATEKARNEQQADESEQADKPEQADGHEN >gi|257257262|gb|ACDX02000001.1| GENE 205 216993 - 217469 435 158 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261363822|ref|ZP_05976705.1| ## NR: gi|261363822|ref|ZP_05976705.1| putative cellulose-binding protein [Neisseria mucosa ATCC 25996] putative cellulose-binding protein [Neisseria mucosa ATCC 25996] # 1 158 1 158 158 243 100.0 2e-63 MDMKTDTPADDADAVIAEVFRLTGTCLTRDDPVMAVLLMQRQMFQTAFAGFAEQQAEQRL EFLKQLAAHERKITAAAAQLERYREQILADFVRQADRHIEEIEPKIYASTSRRVAQDIDK ANARLEGRLKILLAVTLAAVSVLAVSVVWLVFTVSKTG >gi|257257262|gb|ACDX02000001.1| GENE 206 217479 - 217745 220 88 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261363823|ref|ZP_05976706.1| ## NR: gi|261363823|ref|ZP_05976706.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 88 1 88 88 155 100.0 7e-37 MLTEAKPIVRPVRVNPSFVAPDNSYPHYRLIPIETQTGRYYCLFFYVSAKEFLILEPKAK RHLAVARLSEYLQNAAFAVYETVTGAAP >gi|257257262|gb|ACDX02000001.1| GENE 207 217742 - 218068 181 108 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261363824|ref|ZP_05976707.1| ## NR: gi|261363824|ref|ZP_05976707.1| toxin-antitoxin system, antitoxin component, Xre family [Neisseria mucosa ATCC 25996] toxin-antitoxin system, antitoxin component, Xre family [Neisseria mucosa ATCC 25996] # 1 108 1 108 108 194 100.0 1e-48 MKTYNVEEAAAYCKCHPETIREHIRDGRLNASKPGRRYCITQAALDVFLNGLENDAVQAS LESRSEEKCQSIKETTHGMWMSSRQAANALDARLARHAKPKPKSTMTN >gi|257257262|gb|ACDX02000001.1| GENE 208 217945 - 218946 966 333 aa, chain + ## HITS:1 COG:intD KEGG:ns NR:ns ## COG: intD COG0582 # Protein_GI_number: 16128520 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Escherichia coli K12 # 1 318 1 361 387 277 43.0 2e-74 MPIYKRNNTWYVDVVSPSGKRIRRSTGTACQTEAQEYHDKLKHDLWRQQHLGDKPKVLWD EACLRWLDEKQGKKSLVHDETKIRRLTAFRGLYLHHMTKTVIMAEIAKLEGSNATKNRYL AFVQALLNKAAKDWEYLDGAPKLPRYQEAKKRIRWLTPQEAERLIAALPDYIAAMVVFSL NTGLRKSNVFGLKWQQIDFKRKVAWFHHDETKSGRALGVALNDAAVAVLLKQRGKHPEYV FTNNRCKPVKDVKKPWKKALQDAGIENFRWHDLRHTWASWLVQNGVSLYALKEMGGWSDF DMVQRYAHLAPEHLHRHAGLLNSLLDTKWTQLN >gi|257257262|gb|ACDX02000001.1| GENE 209 219217 - 219492 210 91 aa, chain - ## HITS:1 COG:ECs2358 KEGG:ns NR:ns ## COG: ECs2358 COG3313 # Protein_GI_number: 15831611 # Func_class: R General function prediction only # Function: Predicted Fe-S protein # Organism: Escherichia coli O157:H7 # 2 56 49 103 125 72 49.0 3e-13 MEQPDFFPIPSPCIGVCEANAKGYCKGCLRSREERHFWQQMTDDQKHQVMRLLHMRKTKI RNKKLDLLRQQDEWEDIQQDNLFDDNFVPEV >gi|257257262|gb|ACDX02000001.1| GENE 210 219862 - 220233 586 123 aa, chain - ## HITS:1 COG:no KEGG:NGO1981 NR:ns ## KEGG: NGO1981 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae # Pathway: not_defined # 1 118 63 185 186 62 30.0 6e-09 MKFLSAAIVAVLTAGVSMTAAAAPAGYVPYKCDNGKKLNVVYEFDRSGNAVGASANAAGK QISLRVDKRQSDSTGTTFTNKRGFSMSAGYIDKNTHTTSEVVGVTDSRNRFIVKNCEPVN IDR >gi|257257262|gb|ACDX02000001.1| GENE 211 220789 - 222057 1874 422 aa, chain + ## HITS:1 COG:NMA1639 KEGG:ns NR:ns ## COG: NMA1639 COG1914 # Protein_GI_number: 15794533 # Func_class: P Inorganic ion transport and metabolism # Function: Mn2+ and Fe2+ transporters of the NRAMP family # Organism: Neisseria meningitidis Z2491 # 1 418 1 416 417 679 88.0 0 MSEQHTHASTWKSKINALGPGIMMASAAVGGSHLIASTQAGALYGWQLALIIILTNLFKY PFFRFSAHYTLDTGKSLIEGYAEKSRVYLWVFLILCVISATINAGAVAIVTAAIVKMAIP SLTLNVGAISALIMASCLIILASGRYKALDNVSKIIIVSLTIATVAAAAIAMSRGMQMKS DFIEPTPWTLAGLGFLIALMGWMPAPIEISAINSLWVTEKQRINPSSYRDGIFDFNVGYI TSAVLAVVFLALGAYVQYGNGEAVQMAGGKYVGQLINMYAVTIGDWSRPMVAFIAFACMY GTTITVVDGYARAIAEPVRLLRGKDKTGNVELFAWNVWVAGTGLAVIFWFNSAMAELLKF AMITAFISAPVFAWLNYRLVKGDERHKLTAGMNFLAILGLIYLTGFTVLFLLNLTGILAA PK >gi|257257262|gb|ACDX02000001.1| GENE 212 222306 - 222770 923 154 aa, chain - ## HITS:1 COG:NMA1703 KEGG:ns NR:ns ## COG: NMA1703 COG0589 # Protein_GI_number: 15794596 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Neisseria meningitidis Z2491 # 1 153 1 153 154 245 94.0 2e-65 MYKHLVVAVDGSETSLNALKHAAELASVNNARLTLVHVANPAEYMALAPEFLQHESYEAA AVAQGNEVLDFAEKSARENGVENIVKHLLVANKGAREMAQDLVDYADENGADLLVLGTHG RTGLMHLLMGSFAETVMRQSHLPLLIIRSKAEEV >gi|257257262|gb|ACDX02000001.1| GENE 213 222963 - 223739 631 258 aa, chain + ## HITS:1 COG:NMB1501 KEGG:ns NR:ns ## COG: NMB1501 COG1179 # Protein_GI_number: 15677354 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 # Organism: Neisseria meningitidis MC58 # 1 258 1 258 258 441 87.0 1e-124 MNDTVFLPSRRFGGIARLYGDEALVRFSRAHVCVVGVGGVGSWAVEALARTGIGRLTLID LDNVAESNVNRQLHALTDDFGKAKVTALRERIAQINPQCEVEEIEDFVTEDNLETLFRRP FDFVIDAIDQVRVKAAMAAYFVRHKQPFILSGGAGGQKNPALIQTADLSRVTHDPLLANL RYTLRKRYGFSRDTKEKMRVPCVFSTENITPPQSDEACSTDTAPQGLSCAGYGASMLVTA SFGLYCAQAAVEHIAGRK >gi|257257262|gb|ACDX02000001.1| GENE 214 223741 - 224211 216 156 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261363831|ref|ZP_05976714.1| ## NR: gi|261363831|ref|ZP_05976714.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 156 1 156 156 273 100.0 4e-72 MNRFFKAYFIASLIYAVVFGLLMYGDGLLFSGSECFDIAPENEQRLQYCSRAAEMSAFEK VSLKVFFFPFLSVMLLSLLNAGIMKWTKRCTTSMTLALPIVEWLIVWFVFLLWEWSSLDS WMSIGGLLFLGLPVYGMAAVQALSVLRSSANANQKI >gi|257257262|gb|ACDX02000001.1| GENE 215 224264 - 224722 325 152 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|288575311|ref|ZP_05976715.2| ## NR: gi|288575311|ref|ZP_05976715.2| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 152 25 176 176 279 100.0 5e-74 MNRFFKAYFIASLIYAVWFGVLMYAVDPMFGAMGCDMQSGDYLCFQDGSPRPFTNFLYPF LSVPIFSLLHAAIMKWRRRCSVGMIWFLVGCEWLLLSAWIIAMLARDGFVFSRDAVTVLT GSFFAVLPLLGMALAQTLAIAIASLKSQRKKG >gi|257257262|gb|ACDX02000001.1| GENE 216 224828 - 225718 854 296 aa, chain + ## HITS:1 COG:NMB1504 KEGG:ns NR:ns ## COG: NMB1504 COG1354 # Protein_GI_number: 15677357 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis MC58 # 16 271 12 267 284 458 91.0 1e-129 MPSEHLISSAAATSSEHTVAWVFGQPVTDLPQDLFIPPDALKVVLSSFQGPLDLLLYLIR KQNIDVLDIPMVKITEQYLHYIAQMEAYQFDLAAEYLLMAAMLIEIKSRLLLPRPEEVED EEADPRAELVRRLLAYEQMKLAAQGLDALPRAGRDFAWAYLPLEIAVEAKLPEVYVADLT QAWLGILSRAKHTRSHEVIQETISVRAQMTAVLRRLNESGICKFSDLFKPEQGAAYVVVN FIALLELAKEGLVRIVQPDSYGEIEISLKQENLERSEAEERVSDDPSDDFESGTAS >gi|257257262|gb|ACDX02000001.1| GENE 217 225950 - 227284 1752 444 aa, chain + ## HITS:1 COG:BS_brnQ KEGG:ns NR:ns ## COG: BS_brnQ COG1114 # Protein_GI_number: 16079722 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid permeases # Organism: Bacillus subtilis # 17 437 13 433 440 328 46.0 1e-89 MSSNVSPLNHKASLWAVGLMLFALFFGAGNLIFPAYLGQQAGESWLSAMTGFLLTGAGLP LLGVIAIGYSGSRDVQALASRVAPWYGVAFASALYLSIGPLFAMPRTATVSFEIAVAPFL NESQKTVGLAAFSVAFFGVAYWLSMSPGKLVDRIGKILTPVLLLTIAVLVGYAALNPMGV PAAAQGDFALRPFIKGILEGYGTMDALASLVFSIIVIDAVRAMGVDNRSELLRTTAVSGI VAASCLALVYLFIGYMGATSVAGLGLQENGAEVLSKTANFYFGVPGNILLGVIVLLACLS TAVGLITSCSEYFNRLCPGISYKMFVVINTLVSMALANKGLSSILTFSIPMLMLLYPLTI VIILLVFLHKLFGGSRIVYFCTMMATLAVGLLDAYKAAFGFSEEVAADINGALPLYDVGL GWLLPATVGFVLGCVLNAALKKKA >gi|257257262|gb|ACDX02000001.1| GENE 218 227423 - 228646 1908 407 aa, chain + ## HITS:1 COG:NMA1706 KEGG:ns NR:ns ## COG: NMA1706 COG1488 # Protein_GI_number: 15794599 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid phosphoribosyltransferase # Organism: Neisseria meningitidis Z2491 # 2 405 15 418 419 758 90.0 0 MTAPQTPVIRSLLDTDLYKFTMLQVILHQFPQTHSLYEFRCRNKDMVYPLADIQADFERE LDALCQLRFTHDELDYLRSLRFIKSDFVDYLELFQLQRRFVKVSPDNEGRLNIRIEGPMI QAMFFEIFILAIVNELYFRRLETPAVIEEGERRLQAKAQRLKEISAEQNPNDPPFLISDF GTRRRYTLDWQEHVIRTLLEAAPDIVRGTSNVYLAKKIGITPIGTMAHEFLQAFQALDVR LRNFQKAALESWVHEYRGDLGIALTDVVGMDAFLRDFDLYFAKLFDGLRHDSGDPYVWGD KAHAHYKKLKIDSRTKMLTFSDGLDIERSWALHQYFKDRFKTSFGIGTNLTNDMGHTPLN IVLKLVECNGQSVAKLSDSPGKTMTTNNTFLAYLRQVFDVPEPKTEG >gi|257257262|gb|ACDX02000001.1| GENE 219 229288 - 230667 1335 459 aa, chain + ## HITS:1 COG:RSc2451 KEGG:ns NR:ns ## COG: RSc2451 COG3264 # Protein_GI_number: 17547170 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Ralstonia solanacearum # 44 425 42 430 447 202 36.0 8e-52 MDNILHELFARQAFTSSLVERNFGQVSGWIELVGVLMLMAATFWLSNRLKNRYFFAVHGN FALLRHIGRRILWPVLMMIFGAAALFICNLTEFRPVWLHLLILAARWMILIRVSVAVVHA ALPQNRLTDWLEKSVSMVLWVGFVLWLSGLDDKILEMLDGISFSVGSGRLSLLMILNGIL WVGLLMIGASWLARFIGERLEKSSLDNNLSMILSKIIKTVMMVLAVLIALPLVGIDLTVL SVFGGALGVGIGFGLQKVASNYISGFIILGDRSIRMNDRLTVNNFTGYVTKITSRFVVLR NANGTEALIPNETFVTSMVVNESYTSRELQQAFNIQVAYHSDLIKALDIIKSAAAAQPRV SANPAPLAVVTNFGDNGIDLRATYWVKDPENGFAALQSAIFLDIWRQFNEHDIEFPYPQR EVRILNEEQSPSNIAMIKAGMQARSDTKSDPSMDAAGDD >gi|257257262|gb|ACDX02000001.1| GENE 220 230667 - 231116 423 149 aa, chain + ## HITS:1 COG:NMB0642 KEGG:ns NR:ns ## COG: NMB0642 COG0494 # Protein_GI_number: 15676542 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Neisseria meningitidis MC58 # 1 149 3 151 152 254 83.0 6e-68 MAKPLKYPVSALVVLHDADGNILLIERTSPPGFWQSVTGSIEPDETIEETAKREVWEETG IRLADGQLCNWHDSTVYEIYHHWRHRYPKGVFENREHIFSAEIPRDTAIVLQPDEHVAYG WFGIEEAAEKVFSPSNKRAILELGKRLGK >gi|257257262|gb|ACDX02000001.1| GENE 221 231249 - 231782 774 177 aa, chain + ## HITS:1 COG:NMB0641 KEGG:ns NR:ns ## COG: NMB0641 COG0221 # Protein_GI_number: 15676541 # Func_class: C Energy production and conversion # Function: Inorganic pyrophosphatase # Organism: Neisseria meningitidis MC58 # 1 177 1 177 177 341 96.0 4e-94 MADFNKILTPGDVDGGIINVVNEIPAGSNHKIEWNRRLGAFQLDRVEPAIFAKPTNYGFI PQTLDEDGDELDVLLVTEQPLATGIFLEARVIGVMKFVDDGEVDDKIVCVPADDRNNGNA YKTLADLPQQLIKQIEFHFNHYKDLKKAGTTKVESWGDVEEAKKVIKESIERWNKQA >gi|257257262|gb|ACDX02000001.1| GENE 222 232249 - 233688 688 479 aa, chain + ## HITS:1 COG:NMB1451_1 KEGG:ns NR:ns ## COG: NMB1451_1 COG0847 # Protein_GI_number: 15677307 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, epsilon subunit and related 3'-5' exonucleases # Organism: Neisseria meningitidis MC58 # 6 180 3 177 177 265 69.0 2e-70 MRGYWLNLQENKMESVSRWPLLQKAFARFGRPVVVVDLETTGGNLYQDRVTEVALLRFDG QSVCRYEWLVNPCKPIPEFVAQLTGISNKMVKTAPLFEEIASQLLPLLQGAVVVAHNSRF DYTFLRHEFRRAGIDFAAPALCTVQLSRRLYPEFYKHNLDSIIERNAIAVENRHRAMTDV LALSDYLEHSLREKNTEDWDNYCRSLMNPKMLPNWVTDALAAQLYALPDSEGVLVWFDAF GKAQAVVALEKAYSETAEMLHGKKVPLYLKAAASVRFIPALGSLHSVWLKAQVMREYGIR PSERAVSKPTAFSTVRFSPDEHGVLQARIVPLDNGSRAVRPYGLFIHKKAAKRALNTWAL ENRLCPDALNILPVANGKGVPCPVQALGQCDGACRTEDGIEAQNGRIRELAHLLPVADWG RAHEVEITETDGLSGKSITLRCAGGAIAMPDGSWYFDDSLPALLKMKFRRERESVKIIA >gi|257257262|gb|ACDX02000001.1| GENE 223 233898 - 234695 536 265 aa, chain + ## HITS:1 COG:NMA1921 KEGG:ns NR:ns ## COG: NMA1921 COG0561 # Protein_GI_number: 15794806 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Neisseria meningitidis Z2491 # 4 263 10 269 269 281 55.0 1e-75 MSTPKIIFFDIDDTLYRKYTDTLRPSVAKAMEALKARGILTAIATGRPPVAIPGKVKTLI RDSGIDMLVTINGQYTTFHGEVLQAYPMIEAEVERMCTFFDSQYIDYAFVNNDEIVASAA GERVKEALSHILPAFEVDKEYFRKQSVYQMLVFADKAQEQEIIGKIQSEGFKSVRWHESA LDMLRREGSKARGIAHAVEKLGIGMEDVMAFGDSFNDLEMLSSVGFGVAMGNGEEAAKAA AKFIAPSVDEDGVYRALVELGIIDG >gi|257257262|gb|ACDX02000001.1| GENE 224 235079 - 235885 1033 268 aa, chain + ## HITS:1 COG:NMB1616 KEGG:ns NR:ns ## COG: NMB1616 COG0351 # Protein_GI_number: 15677466 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase # Organism: Neisseria meningitidis MC58 # 1 268 1 268 268 424 82.0 1e-119 MKETFVQTLTIAGSDSGGGAGIQADLKTFQMRGVFGTSVLTAVTAQNTLGVSAVHLVPTD IIAAQIEAVRADFEIRAYKIGMLGTAEVIECVAENLKKCRFGKRVLDPVMIAKGGAPLLQ DSAVEAMKRLLLPDTDILTPNLPEAEALTGVRIENRQDAERAAKILQDCGVKNVVIKGGH LSDSRSEYCTDWLFTPDEVFEFTDRRFPTAHTHGTGCTFSACIAAELAKGFETLEAVQTA KKYITEAICNPLNIGAGHGPVNHWAYRD >gi|257257262|gb|ACDX02000001.1| GENE 225 235950 - 236831 1223 293 aa, chain - ## HITS:1 COG:MA1840 KEGG:ns NR:ns ## COG: MA1840 COG0524 # Protein_GI_number: 20090690 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Methanosarcina acetivorans str.C2A # 1 282 29 315 326 153 34.0 4e-37 MKVTSFGEVLWDDFPSGKVLGGAPLNVLVRLQSFGVDTAIISRRGDDADGEELLRQIQAK NVNTDLLQVCKECDTSLVKVILDKCGSASYEIVYPCAWDRIVVEDAALQRVAESDVFVFG SLATRDEISRSALDKLMEKAKFKIFDVNLRKPHYDTDRLLATMKRADMLKLNDDELYELS AAYGSPYHSIEQNITYLTQLTGAKIICVTLGGHGAVLYKDGELYRHCGFRIKVADTVGSG DSFLAGLTYKLLNNAEPQEAITFACALGALVASRHGATPDISLQEIESFMNPA >gi|257257262|gb|ACDX02000001.1| GENE 226 237288 - 238346 1343 352 aa, chain + ## HITS:1 COG:NMA1906 KEGG:ns NR:ns ## COG: NMA1906 COG0787 # Protein_GI_number: 15794791 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Alanine racemase # Organism: Neisseria meningitidis Z2491 # 1 352 1 352 352 622 80.0 1e-178 MRPLNARIRLDNLRHNYQTLKQIHGGKMLAVIKADAYGHGAVRCAHALSEIADGFAVATV DEAVELRESGITNPIVLLEGVFEAAEYATVDKYNLWPGVGSQWQLEALIAHHWQNPVKVW LKMDSGMHRAGFFPHNYTSAYTALKQCKHVDSIVKFSHFACADEPDNGMTEMQLEAFDLA CEGLEGEESLANSAAILNVPEARRDWGRAGLALYGISPFGGVDERLKPVMRLTSRVFGER VLQPHSPVGYGATFYTSKSTRVGLIACGYADGYPRRASTNSPVAVEGKRSRIIGRVSMDM ITVELDASQEGLGAEVELWGDVVNINEVAEAAGMIPYEILCNVKRAKFTYSE >gi|257257262|gb|ACDX02000001.1| GENE 227 238905 - 239177 418 90 aa, chain + ## HITS:1 COG:NMB1653 KEGG:ns NR:ns ## COG: NMB1653 COG3830 # Protein_GI_number: 15677502 # Func_class: T Signal transduction mechanisms # Function: ACT domain-containing protein # Organism: Neisseria meningitidis MC58 # 1 90 1 90 90 142 95.0 1e-34 MNNSVITVIGKDRVGIVYDVSGILAENQINILNISQQLMDDFFTMIILVDTSKCPKSRQE MLNLFAEESKKLALDIRMQNEEIFQAMHRI >gi|257257262|gb|ACDX02000001.1| GENE 228 239192 - 240547 1847 451 aa, chain + ## HITS:1 COG:NMA1908 KEGG:ns NR:ns ## COG: NMA1908 COG2848 # Protein_GI_number: 15794794 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 1 451 1 451 451 770 98.0 0 MSIQSGEILETVKMVADQHFDVRTITIGIDLHDCISTDIDVLNQNIYNKITTVGKDLVAT AKHLSAKYGVPIVNQRISVTPIAQIAAATKADSYVSVAQTLDKAAKAIGVSFIGGFSALV QKGMSPSDEVLIRSIPEAMKTTDIVCSSINIGSTRAGINMDAARLAGETIKRTAEITPEG FGCAKIVVFCNAVEDNPFMAGAFHGSGEADAVINVGVSGPGVVKAALENSDAVSLTEVAE VVKKTAFKITRVGELIGREASKILGIPFGILDLSLAPTPAVGDSVARILEEMGLSVCGTH GTTAALALLNDAVKKGGMMASSAVGGLSGAFIPVSEDEGMIAAAEAGVLTLDKLEAMTAV CSVGLDMIAVPGDTPAHTISGIIADEAAIGMINSKTTAVRIIPVTGKTVGDSVEFGGLLG YAPVMPVKEGSCEVFVNRGGRIPAPVQSMKN >gi|257257262|gb|ACDX02000001.1| GENE 229 240698 - 241117 507 139 aa, chain + ## HITS:1 COG:NMB1564 KEGG:ns NR:ns ## COG: NMB1564 COG1765 # Protein_GI_number: 15677415 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Neisseria meningitidis MC58 # 1 139 1 139 140 237 90.0 5e-63 MQVTSKWIDGMCFVGTTENGHSVVMEGAAAEGQAKRGPSPMEMLLLGVAGCSSIDVVMIA EKQRQKVVDCQATVTAKRADDAPRVFTEIHIHFKVIGHNLTESAIERAVQMSAEKYCSAS IMLGKAAKITHSFETVEAE >gi|257257262|gb|ACDX02000001.1| GENE 230 241479 - 242195 987 238 aa, chain + ## HITS:1 COG:NMA1751 KEGG:ns NR:ns ## COG: NMA1751 COG1802 # Protein_GI_number: 15794644 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Neisseria meningitidis Z2491 # 1 236 1 237 238 369 81.0 1e-102 MNTDNETLHAPTPSSMMPAGRHDSELFRVYALILDGITDHVLLPGKKLTESELCRQMVCS RNTVRGALSLLAHDKIVDLQPNRGAFVHVPDLKEMQDVFNARIEMESMILNLLSDMPDLE TRLQPLYAMIEREEQASDSGDRVGWNRLSNAFHVELARLIDNNVLFDIMNTLCARSSLIV AVFDAQRHEKRAINPHTHSEHREILDLLVNGKRNRVGKIMRKHLSACVERLERKYEGE >gi|257257262|gb|ACDX02000001.1| GENE 231 242343 - 243425 1058 360 aa, chain + ## HITS:1 COG:NMB1679 KEGG:ns NR:ns ## COG: NMB1679 COG2265 # Protein_GI_number: 15677527 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Neisseria meningitidis MC58 # 1 360 1 360 362 568 76.0 1e-162 MTAYTQQLDQKIQYLQQLFQGLDFPEIQVFESPEQHYRMRAEFRIWHEGGEMFYAMFERG QKASGASLIRCDQFPAASESINTLMPKLIEAATQNPELKKRWYAVEFLSALSSEMLVTMI YHKKLDEAWQRAAETLARELGIHIIGRSRGQKIVLTQDYITEELNVNGKTFRYRQVEGSF TQPNARVCEKMLGWACDVAQNLSGDLLELYCGNGNFTLPLSQHFHQVLATEVSKTSVYAA QWNIEANQRDNIKIARLSAEEFTEAYTQSRKFHRLQEQGVSLKDYGFSTIFVDPPRAGVD DETLKLVSQFDNIIYISCNPETLRANLDTLCQTHTIERAALFDQFPFTHHIESGVYLKKK >gi|257257262|gb|ACDX02000001.1| GENE 232 243542 - 244312 766 256 aa, chain + ## HITS:1 COG:RSc3337 KEGG:ns NR:ns ## COG: RSc3337 COG0730 # Protein_GI_number: 17548054 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Ralstonia solanacearum # 7 253 3 248 252 183 45.0 3e-46 MPVDSFFYLLLLTGFCAGLMDAAVGGGGLLQIPGLFNLLPTSTPVASVMGVNKFASCCGT VTATGQYLRRIPVPWKMLLPAAVLAFAASYLGAKAVVFFPVQYMKPAMLVIMIAMCVYTF IKKDLGQTVRTEKLTRRETLWGLFFGALIGFYDGIFGPGTGSLLAFVFVRFYGYDFLTAN ASGKVINSTTNLAALTFFIPQGHVVWAWAIPLALANLCGGMVGAKLAIRGGTQFLRYGFM VLLCLTIGKFAWDLIR >gi|257257262|gb|ACDX02000001.1| GENE 233 244416 - 245516 1688 366 aa, chain + ## HITS:1 COG:NMA1939 KEGG:ns NR:ns ## COG: NMA1939 COG0082 # Protein_GI_number: 15794822 # Func_class: E Amino acid transport and metabolism # Function: Chorismate synthase # Organism: Neisseria meningitidis Z2491 # 1 366 1 366 366 670 94.0 0 MAGNTFGQLFTVTTFGESHGAGLGCIIDGCPPGLALTESDIQADLDRRKPGTSRHVTQRR EADQVEILSGVFEGKTTGTPIALLIRNTDQRSKDYGNIATSFRPGHADYTYWHKYGTRDY RGGGRSSARETAARVAAGAIAKKWLKEKFDTEITAYVTQVGEKEIQFEGYEHISQNPFFA ANQSQIAELENYMDSVRKSLDSVGAKLHIEAANVPVGLGEPVFDRLDAEIAYAMMGINAV KGVEIGAGFGSVVQRGSEHGDELTPQGFLSNHSGGILGGISTGQDIHVNIAIKPTSSIAT PRRSIDINGNPVELATHGRHDPCVGLRAAPIAEAMLALVLIDHTLRHRAQNADVVADTPD IAKQHR >gi|257257262|gb|ACDX02000001.1| GENE 234 245745 - 246209 726 154 aa, chain + ## HITS:1 COG:no KEGG:NGK_1557 NR:ns ## KEGG: NGK_1557 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 1 112 1 112 141 196 93.0 3e-49 MTQETALGAALKSAVQTMSKKKQTDMIADHIYGKYDVFKRFKPLAVGIDQDLVAALPQYD PALIARVLANHCRRPRYLKALARGGKRFDLNNRFKGEVSAEEQAIAQQHPFVQQALAEQA ERQAAKQAAQTEAVEAEQVGAAAETEEAAQNNAE >gi|257257262|gb|ACDX02000001.1| GENE 235 246821 - 249478 2156 885 aa, chain - ## HITS:1 COG:NMB1415 KEGG:ns NR:ns ## COG: NMB1415 COG2931 # Protein_GI_number: 15677274 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: RTX toxins and related Ca2+-binding proteins # Organism: Neisseria meningitidis MC58 # 49 798 1019 1686 1829 204 31.0 6e-52 MNIKKIPSTQHMHGVSTSADTGNTNNGTYIRSNISRTLAAGEKNLILEGDANIFGAGNNG DNILIGNSGRNRLNSGRGNDTVYGGGGDDTINGGEGFDLLFGEDGDDTLNGEAGDDILNG GAGNDTYIFSAAGGRDTIIDTEGNNRIRFTGGLRAEDLTITAVANNDGGQDWKISIKNTD SVLTISNQYTAGSSVPSIHQFVFDNGVLNVAEFIRATKANIETAKPQNLAINGTDSDDVL NGSDGNDTIDGKAGADTMSGGWGDDTYYVDNVKDVIIEGKGAGTDTVISSVSYTAATNVE NVTLTGNANIFGAGNNSDNILTGNAGHNRLNSGRGNDTVYGMGGNDNLNGGDGDDYLDGG EGNDNINGDAGNDTLIGGKGKDTLKGGAGNDTYIFGDDDTIIDNQGNNSLRFSDDLRIKD LKISVNDNAQGGKDWLITSTNGSALIRDQIGADGKVSVGRFELLGETYTHESLLKAVANS NKQDSTITGTARDDILTGTEQNDTIDSGIDGRDRLYGLGGDDILRDSGTSYFGNERDDEL YGGDGNDKLYADVGDDYLDGGAGDDHLEGGQHRDTYVFGKGYGHDTIFDYNFNLDPEFNP NGMQNANTVKFTGGLTLDDLEISMTQGYDKSGIDHIPSNSEFIIIPRLNGDTWNISIKGT NDVLTIKNQSGIYGAISEFQFDSKTYTVGEIIEHFGLNVPHFDKAGNLVHDLTDKIDWYG VDQRGYNRVVYGSADNDTADFSDVIGKVTFYGGKGEDIITLGRYNVIDGGTGNDAIFDSG HSVKNTIMLGKESGKDTLHNIRTEADTTVLFSGNLTIKDVELTTGKDWVVKLKGSNNALT IKDMVHSPSGHDTVDTFKFEGGESYTTTQFLKALGMDSTVNHGLI >gi|257257262|gb|ACDX02000001.1| GENE 236 250226 - 250720 872 164 aa, chain - ## HITS:1 COG:NMA0765 KEGG:ns NR:ns ## COG: NMA0765 COG4314 # Protein_GI_number: 15793740 # Func_class: C Energy production and conversion # Function: Predicted lipoprotein involved in nitrous oxide reduction # Organism: Neisseria meningitidis Z2491 # 1 164 1 164 164 275 79.0 3e-74 MKKILPALLATLILSACPKAEETPPPAPQQISDRAVGHYCSMNLTEHNGPKAQIYLNGKP DRPVWFSTIKQMFGYTKLPEEPKGIHVIYVTDMGKVKDWSKPNADTAWIDGKKAYYVIES GFIGGMGAEDALPFADKAQAEKFAKEKGGRVVSFDEMPDSYIFK >gi|257257262|gb|ACDX02000001.1| GENE 237 250717 - 251547 1383 276 aa, chain - ## HITS:1 COG:SMa1185 KEGG:ns NR:ns ## COG: SMa1185 COG1277 # Protein_GI_number: 16263099 # Func_class: R General function prediction only # Function: ABC-type transport system involved in multi-copper enzyme maturation, permease component # Organism: Sinorhizobium meliloti # 1 276 1 275 275 224 52.0 1e-58 MNPVWIITGKEVRDSLRNRWVLAASVLLAALALSLGFLGSSPTGSVKVDPLTVTVVSLSS LSIFLIPLIAMLLSYDSLIGEIERGTMALLLSYPVSRNQILAGKFIGHLIILALATTAGY GIAGITLQLANGSFDIAAWKPFALLIAASVILGAAFLSMGYLISAKVKERGTAAGIAIGV WLFFVVIFDMALLGILVADTQQAITASVVETVLLFNPTDIYRLLNLTGYENTAMYAGMAG LSEQISLTMPVLLTAQILWVIIPLILAARIFGKRQI >gi|257257262|gb|ACDX02000001.1| GENE 238 251544 - 252440 1446 298 aa, chain - ## HITS:1 COG:NMA0763 KEGG:ns NR:ns ## COG: NMA0763 COG1131 # Protein_GI_number: 15793738 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Neisseria meningitidis Z2491 # 1 205 11 215 216 361 93.0 1e-100 MSAHHVELRNVTKRFGAQKAVNQVDLVLKAGESVGLAGHNGAGKSTLIKLILGLITPTEG EVMLLGERTGSKAGAQLRSQIGYLPETVALHPSLSGIETLNFYAKLKKQPLTKNHELLER VGISQAARRRVGTYSKGMRQRLALAQALLGEPKVLLFDEPTTGLDPASRQMFYEVVRELN GRGATVLLSTHALAELDGHADRIVVMKNGVKVADGSMDELHVQSGLPLTVNIRLKAPRPL SGRWQPLSDDLSYRAQCQAEERMALLSELGNLSDLAYLDIHTPTLDDMYAQFLKREDV >gi|257257262|gb|ACDX02000001.1| GENE 239 252824 - 254179 2189 451 aa, chain - ## HITS:1 COG:NMB0578 KEGG:ns NR:ns ## COG: NMB0578 COG3420 # Protein_GI_number: 15676483 # Func_class: P Inorganic ion transport and metabolism # Function: Nitrous oxidase accessory protein # Organism: Neisseria meningitidis MC58 # 108 451 1 344 344 610 86.0 1e-174 MHTPQFKTWRRAVLTFMFGSMIQTTFAATIDVSPTDNLPEIIARAQAGDTLKLASGTYKT KLLIDKPITIEGPADRSAKIEGDRTGRTISVTAPDVTLRNLTVTRSGMSLPAMDAGIYLE ETAPRALIEHNNILDNSVGVYIHGSAESMVRENKIVGDATLRVNERGNAVTVWNAPGAQV IGNDISKGRDGIFSNTSKNNTYKNNRFSDLRFAVHYMYTNDSEVSDNISVGNNMGYVLMF SDRLKVHGNIAVGSRDQGIMLNYVNYSEINDNIINKAGKCVFAYNANYNKIVANHFENCE IGIHFTAAIEGTSLSDNAFINNESQVKYVSTRFLDWGEGGRGNYWSDNSAFDLDGDGFGD SAYRPNGIIDQIVWRAPVARLLMNSPAISIVKWAQSQFPAILPGGVIDSKPLMKAGSNKT TTKYEAMKEQLLQEAKTNQSKWSDAENGALN >gi|257257262|gb|ACDX02000001.1| GENE 240 254544 - 256514 2570 656 aa, chain - ## HITS:1 COG:SMa1182 KEGG:ns NR:ns ## COG: SMa1182 COG4263 # Protein_GI_number: 16263096 # Func_class: C Energy production and conversion # Function: Nitrous oxide reductase # Organism: Sinorhizobium meliloti # 1 656 1 637 639 863 63.0 0 MSDEKLEQNGLSRRSFLGTAAASGAGIAGAGLLGLAGCSKEGGDKAAASGAAPASKAEAQ APAEPGKQTSEVGPGELDQYYGLLSGGQSGEMRLIGVPSMRELMRIPVFNMDSATGWGRT NESLRILNEKNTPETNKFLKDAGLLCLPNGDLHHPHLSFTDQTYDGRYAYANDKANNRVC RVRLDFMKTDKITEIPNASGIHGLRPQRYPKTGYVFANGEHIVPVSGVGTWNDPKTWNAV YTAIDGETMDIAWQVLVDGNLDNGDADYQGKYSFATCYNSERALTVAGASSNEQDWCVVF NLAAIEEGIKNGDFKEVNGVKMLDGRAEANSKYTRYIPVPNSPHGCNASPDGKYIMLNGK LSPTVTVLDVSKLDDLFAGKIKERDVVVAEPQLGLGPLHTAFDGRGNAYTTLFIDSQMVK WNIDEAIKAYKGEKIDPIKQKLDVHYQPGHNHTTMGETKDADGKWLVSLNKFSKDRFLNA GPLKPECDQLIDISGDEMRLVHDNPTFAEPHDLCLVNASVINPKKTWDRNDPWFWQDALE QAKKDGVELEKAAKVIREGNKVRVYMTAIAPAYSVPQFEVNQGDEVTVYVTNVETIEDLT HGFTLEGYGIAMEIGPQATQSVTFKALRPGVHWYYCQWFCHALHMEMSGQMIVKPR >gi|257257262|gb|ACDX02000001.1| GENE 241 256676 - 258946 2256 756 aa, chain - ## HITS:1 COG:SMa1179_1 KEGG:ns NR:ns ## COG: SMa1179_1 COG3901 # Protein_GI_number: 16263095 # Func_class: K Transcription # Function: Regulator of nitric oxide reductase transcription # Organism: Sinorhizobium meliloti # 19 501 34 487 487 353 39.0 5e-97 MLAMFAVFVLLFSTLPAYAERLPEFLSKIQPAEIFPGADRYGKPEGKPMVARVYKGDEQL GLVYITTDVVNTRGYSSKPIDTMVALANDGTVAGAKLVDHHEPIMLIGIPQSRVDKFINK YIGLNFIKNPPTPGVAPGDIISGATVTLMVINDSIQRSFKVVAGKYGLGTDKAVQTTSAN PADTQQAAEPTTQTRPRRAVNPDKQDIQSWNALLEQKAIGHLHISVDEINKLFEKGGKAG VADHAEQGSGDDTFIDLYTAVVSQPSIGKSLLGEQGWKNLQSRLQPGQQAVLVAGEGRYS WKGSGYVRGGIFDRIEMIQGENSFRFTDAEHERLVSLAAEGAPHFKEVSWFTIPANVEFD AAEPWRLQLMVQRVLSVNDKAFVTADLDYELPKGYYVDDPKAPPVEISAPVEPAAAAADA ADTGNGIADQASADDGASNQLWKQVWKAKQGQIIVVGIALTILLLVFLFQDWIVRYEKWY DRFRLVFLTFTLVYIGWYAQAQLSVVNTLTLFSAILTEFRWDFFLMDPIVFILWLFTAAT MLLWNRGTFCGWLCPFGSLQELTNRIAKKLGVKQITVPHLLHTRLTAIKYVIFFGLLAIS LYDLGTAEKFAEVEPFKTAIILKFVREWWFVAFAVALLVAGLFIERFFCRYLCPLGAGIA LPGRFRVFDWLRRYKMCGNPCQICTHECPVQAIAPEGDIHPNECIQCLHCQVMYHHDTRC PQVVATNKKNKNRRRRKPNPKPHLQHSSLPSRLCSL >gi|257257262|gb|ACDX02000001.1| GENE 242 259327 - 260202 1159 291 aa, chain - ## HITS:1 COG:NMA0880 KEGG:ns NR:ns ## COG: NMA0880 COG0777 # Protein_GI_number: 15793849 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase beta subunit # Organism: Neisseria meningitidis Z2491 # 1 291 1 290 290 553 92.0 1e-157 MSWLDKILPPKIKNRSKDEGSSNVPEGLWHKCPSCSATIYSTELQQNDQVCPKCNHHNPL SARERLNLLLDEEGREEIAANIKPTDPLKFKDSKKYPERLTAARKATGEDDALVVMKGFM NGLPVVIAAFEFRFIGGSMGSVVGERFVQGVRRAVADNCSFICVAASGGARMQEGVNSLM QMTKTSAALHLLTEKHLPFISVLTDPTMGGVSASFAFLGDVVLAEPNALIGFAGPRVIEQ TVRETLPEGFQRAEFLLEKGAIDQIVDRRNMKQRISDLITLLRREDKVNAA >gi|257257262|gb|ACDX02000001.1| GENE 243 260262 - 261146 503 294 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149916131|ref|ZP_01904653.1| 50S ribosomal protein L25/general stress protein Ctc [Roseobacter sp. AzwK-3b] # 34 271 1 240 263 198 42 2e-49 MQFRPKQTVNAILANLLSMKTGLKQPLRKREIKMSRIQQTFAALDGAKALIPYITVGDPN LDTTLALMHSLVENGADILELGVPFSDPMADGPTIQRAAERALANKVSLNDVLNIVRRFR ETNGNTPVVLMGYLNPIHKIGYQAFAQAAAEAGVDGVLTVDSPVETITPLHDALKARGID CIFLIAPTTTEERIQTIARVAGGFVYYVSLKGVTGAASLDTEEVSRKIELLRKYIDIPIG VGFGISNAESARKIGAVADAVIVGSRIVKEIENNAGHEAEAVGALAKELKDAIR >gi|257257262|gb|ACDX02000001.1| GENE 244 261394 - 262260 1131 288 aa, chain + ## HITS:1 COG:STM1989 KEGG:ns NR:ns ## COG: STM1989 COG2354 # Protein_GI_number: 16765325 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 284 1 298 303 269 54.0 5e-72 MAFASLFTLLDDITAVLDDVALMTKMAAKKTAGVVGDDLALNANQVTGVSAERELPIIWA VAKGSLVNKLILVPLALLLSAFLPKLITPLLMIGGIYLCFEGVEKLLHKFLHRHEAHDDE EAAAETLDEKTKIKGAIRTDFILSAEIIIIALGVVEKYDLMIRSLVMAAIGVGMTVFVYG LVGVIVKLDDFGMLLMRQKSTGIQTVGQGLIAFMPWFMRGLSVVGTLAMFLVGGGLIAHN LGFLHDFLHAQHWDSGLMEHIANLAVGLIAGALACAVALPLMKLFQKH >gi|257257262|gb|ACDX02000001.1| GENE 245 262342 - 263883 1517 513 aa, chain + ## HITS:1 COG:NMB0713 KEGG:ns NR:ns ## COG: NMB0713 COG0815 # Protein_GI_number: 15676611 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Apolipoprotein N-acyltransferase # Organism: Neisseria meningitidis MC58 # 1 511 11 522 524 812 76.0 0 MNIFRKLEQYWQHPVLYWPLVILIAAATPLTFAPYYHFWLMPLLFGALIRLIELRPRFAV STAYLFGLIAYTTQFYWIHTALHDVSGLPNLYAIPLTFLLPAFLALYPAVCFWLWKKFHL PRWVKVGIVLPILWTLAEFARERLLTGFGWGALGYSQIVKESPLAGFAPLGGIHLVTLAT AFVSAWLVLLIDNTGRLKQRLLPMCMIVMLCTVGFIAQQADFTKPDGSTSTVALVQGNIE QSLKWDEEQVVPTIQKYYGQISKTSADIVILPETALPVMRQDLPENILTQFAEQARTNGS ALAVGIGQYTADGSGYENAVINLSDYDDVSDDLPYYAKNHLVPFGEYKPLPFLTEPLYKL MNMPLADFRRGGAAQAPLTMKGQKVAFNICYEDGFGDELIATAKNATLLANVSNMAWYGD SNAMYQQLQQSQARAMELGRYMVRATNTGATAIISPKGSIIAESEPNTDAVLEGHVKGYV GETPYMKAGGSLWLIGVLSIIAITLFLIRKKAD >gi|257257262|gb|ACDX02000001.1| GENE 246 263946 - 264413 558 155 aa, chain - ## HITS:1 COG:SP1928 KEGG:ns NR:ns ## COG: SP1928 COG3293 # Protein_GI_number: 15901752 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 42 152 12 124 129 84 44.0 9e-17 TVIIDVTESPIERPKKQRQYYSGKKKRHTVKIQVIYGRETEKIISIRTGMGAQHDMRLAR RHLTELYPYKIVIADKGYQGLAKTGLQTPKKKSKHHLLNKQDKEANRRLGKLRTVIEHIN RKLKIFKILSLPYRNRRKRFGLRANLIAGLINAMG Prediction of potential genes in microbial genomes Time: Sat Jul 16 23:30:47 2011 Seq name: gi|257257259|gb|ACDX02000002.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont1.1, whole genome shotgun sequence Length of sequence - 213435 bp Number of predicted genes - 225, with homology - 225 Number of transcription units - 120, operones - 54 average op.length - 2.9 N Tu/Op Conserved S Start End Score pairs(N/Pv) - 5S_RRNA 84 - 140 91.0 # AE015927 [R:2797299..2798807] # 5S ribosomal RNA # Clostridium tetani E88 # Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium. + Prom 636 - 695 4.8 1 1 Tu 1 . + CDS 796 - 1695 411 ## COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase - Term 2105 - 2149 9.0 2 2 Op 1 7/0.000 - CDS 2165 - 3382 1637 ## COG2871 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF 3 2 Op 2 9/0.000 - CDS 3396 - 3989 990 ## COG2209 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE 4 2 Op 3 9/0.000 - CDS 3993 - 4619 815 ## COG1347 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD 5 2 Op 4 9/0.000 - CDS 4619 - 5395 1213 ## COG2869 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC 6 2 Op 5 7/0.000 - CDS 5388 - 6620 1758 ## COG1805 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB 7 2 Op 6 2/0.222 - CDS 6623 - 7966 1787 ## COG1726 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA - Prom 8109 - 8168 5.7 - Term 8256 - 8312 14.4 8 3 Tu 1 . - CDS 8332 - 9753 1136 ## COG1055 Na+/H+ antiporter NhaD and related arsenite permeases - Prom 10001 - 10060 6.5 - Term 10098 - 10145 12.1 9 4 Tu 1 . - CDS 10165 - 11586 1911 ## NGO1688 putative outer membrane protein OmpU - Prom 11703 - 11762 6.8 10 5 Tu 1 . - CDS 12171 - 13001 1097 ## COG3039 Transposase and inactivated derivatives, IS5 family - Term 13815 - 13855 9.1 11 6 Tu 1 . - CDS 13874 - 14245 559 ## MS0269 hypothetical protein - Prom 14277 - 14336 6.5 + Prom 14411 - 14470 6.7 12 7 Op 1 . + CDS 14499 - 14717 410 ## COG0597 Lipoprotein signal peptidase 13 7 Op 2 6/0.000 + CDS 14801 - 15016 277 ## COG0597 Lipoprotein signal peptidase 14 7 Op 3 . + CDS 15043 - 16011 437 ## PROTEIN SUPPORTED gi|227371337|ref|ZP_03854821.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SSU ribosomal protein S1P + Term 16055 - 16095 9.1 + Prom 16076 - 16135 2.2 15 8 Tu 1 . + CDS 16158 - 16550 520 ## UMN179_01902 hypothetical protein + Term 16557 - 16604 12.6 + Prom 16570 - 16629 5.6 16 9 Tu 1 . + CDS 16655 - 17584 382 ## PROTEIN SUPPORTED gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 - Term 17497 - 17527 -0.9 17 10 Op 1 . - CDS 17684 - 17878 189 ## COG3024 Uncharacterized protein conserved in bacteria 18 10 Op 2 . - CDS 17917 - 18198 203 ## NMCC_1774 hypothetical protein - Prom 18224 - 18283 2.6 19 11 Op 1 7/0.000 - CDS 18355 - 18984 252 ## COG0237 Dephospho-CoA kinase 20 11 Op 2 7/0.000 - CDS 18986 - 19849 467 ## COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases 21 11 Op 3 24/0.000 - CDS 19851 - 21092 805 ## COG1459 Type II secretory pathway, component PulF - Term 21112 - 21152 2.3 22 11 Op 4 . - CDS 21164 - 22843 876 ## COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB - Prom 22886 - 22945 5.5 - Term 23056 - 23105 12.4 23 12 Op 1 . - CDS 23131 - 23598 399 ## COG2913 Small protein A (tmRNA-binding) 24 12 Op 2 . - CDS 23666 - 24763 1026 ## COG5295 Autotransporter adhesin - Prom 24784 - 24843 4.8 + Prom 25482 - 25541 4.9 25 13 Tu 1 . + CDS 25585 - 26847 1041 ## COG1519 3-deoxy-D-manno-octulosonic-acid transferase + Term 26874 - 26925 9.2 - Term 26926 - 26976 6.1 26 14 Tu 1 . - CDS 26998 - 27219 314 ## gi|261363888|ref|ZP_05976771.1| OmpA/MotB:Rickettsiasurface antigen - Prom 27339 - 27398 8.6 - Term 27369 - 27435 5.6 27 15 Tu 1 . - CDS 27457 - 28506 1206 ## COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase - Prom 28611 - 28670 11.8 28 16 Tu 1 . + CDS 28934 - 29995 682 ## PROTEIN SUPPORTED gi|229232313|ref|ZP_04356740.1| (SSU ribosomal protein S18P)-alanine acetyltransferase + Term 30029 - 30094 14.0 - Term 29866 - 29917 8.0 29 17 Op 1 9/0.000 - CDS 30119 - 30553 846 ## COG1952 Preprotein translocase subunit SecB 30 17 Op 2 . - CDS 30579 - 30836 383 ## COG0695 Glutaredoxin and related proteins - Prom 30878 - 30937 4.8 31 18 Tu 1 . + CDS 31176 - 32669 2186 ## COG1530 Ribonucleases G and E + Term 32678 - 32725 11.8 + Prom 32779 - 32838 3.0 32 19 Op 1 40/0.000 + CDS 32992 - 33663 1268 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 33 19 Op 2 . + CDS 33730 - 35061 2071 ## COG0642 Signal transduction histidine kinase + Term 35073 - 35113 9.1 - Term 35058 - 35104 12.1 34 20 Tu 1 . - CDS 35123 - 35869 256 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 - Prom 35932 - 35991 3.7 35 21 Op 1 . - CDS 36146 - 37186 1308 ## Psyc_1209 hypothetical protein 36 21 Op 2 . - CDS 37196 - 38206 856 ## Psyc_1209 hypothetical protein - Prom 38250 - 38309 3.9 37 22 Op 1 5/0.000 - CDS 38351 - 42055 3569 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 38 22 Op 2 2/0.222 - CDS 42168 - 44021 2262 ## COG1132 ABC-type multidrug transport system, ATPase and permease components - Prom 44096 - 44155 5.7 - Term 44420 - 44458 6.2 39 23 Op 1 2/0.222 - CDS 44481 - 45407 1101 ## COG0331 (acyl-carrier-protein) S-malonyltransferase 40 23 Op 2 . - CDS 45427 - 46716 1310 ## COG3326 Predicted membrane protein + Prom 47048 - 47107 5.5 41 24 Tu 1 . + CDS 47136 - 47876 477 ## APJL_1740 colicin import membrane protein + Term 47966 - 48031 19.7 + Prom 48006 - 48065 3.8 42 25 Tu 1 . + CDS 48275 - 49486 1185 ## COG3385 FOG: Transposase and inactivated derivatives + Term 49620 - 49669 12.3 - Term 49706 - 49744 -0.1 43 26 Tu 1 . - CDS 49788 - 50750 1226 ## COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III - Prom 50858 - 50917 4.9 - Term 50797 - 50836 -0.1 44 27 Tu 1 . - CDS 50951 - 51676 365 ## COG1385 Uncharacterized protein conserved in bacteria - Prom 51703 - 51762 6.6 + Prom 51651 - 51710 3.8 45 28 Op 1 . + CDS 51852 - 52547 1051 ## COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family 46 28 Op 2 . + CDS 52750 - 52983 163 ## Deima_1226 hypothetical protein + Term 53059 - 53100 10.6 - Term 53047 - 53088 10.6 47 29 Tu 1 . - CDS 53115 - 54695 2217 ## COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) - Prom 54797 - 54856 3.0 + Prom 54894 - 54953 6.4 48 30 Op 1 5/0.000 + CDS 55017 - 55682 861 ## COG1462 Uncharacterized protein involved in formation of curli polymers 49 30 Op 2 5/0.000 + CDS 55696 - 56055 491 ## COG4259 Uncharacterized protein conserved in bacteria 50 30 Op 3 . + CDS 56052 - 56723 678 ## COG4380 Uncharacterized protein conserved in bacteria + Term 56732 - 56782 10.2 - Term 56724 - 56766 9.1 51 31 Op 1 . - CDS 56898 - 58124 1058 ## COG0038 Chloride channel protein EriC 52 31 Op 2 . - CDS 58176 - 58994 709 ## gi|261363915|ref|ZP_05976798.1| hypothetical protein NEIMUCOT_03897 - Prom 59159 - 59218 1.9 53 32 Op 1 . - CDS 59250 - 60113 763 ## PROTEIN SUPPORTED gi|42631297|ref|ZP_00156835.1| COG0697: Permeases of the drug/metabolite transporter (DMT) superfamily 54 32 Op 2 12/0.000 - CDS 60125 - 60370 399 ## COG2901 Factor for inversion stimulation Fis, transcriptional activator - Prom 60434 - 60493 2.4 55 32 Op 3 . - CDS 60495 - 61499 775 ## PROTEIN SUPPORTED gi|145632364|ref|ZP_01788099.1| ribosomal protein L11 methyltransferase - Prom 61522 - 61581 4.6 - Term 61576 - 61606 3.0 56 33 Tu 1 . - CDS 61658 - 62308 740 ## COG1994 Zn-dependent proteases - Term 62453 - 62490 1.0 57 34 Op 1 . - CDS 62505 - 62978 573 ## COG1466 DNA polymerase III, delta subunit 58 34 Op 2 12/0.000 - CDS 62587 - 63507 361 ## COG1466 DNA polymerase III, delta subunit 59 34 Op 3 . - CDS 63507 - 63986 745 ## COG2980 Rare lipoprotein B - Prom 64011 - 64070 5.5 + Prom 64063 - 64122 5.0 60 35 Tu 1 . + CDS 64144 - 65079 1426 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) + Term 65269 - 65311 -1.0 + Prom 65180 - 65239 5.1 61 36 Op 1 . + CDS 65343 - 65762 585 ## NMC0659 hypothetical protein 62 36 Op 2 . + CDS 65860 - 66384 763 ## COG1714 Predicted membrane protein/domain + Term 66409 - 66468 19.4 - Term 66404 - 66450 14.4 63 37 Op 1 16/0.000 - CDS 66477 - 67580 1751 ## COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) - Prom 67661 - 67720 2.9 64 37 Op 2 . - CDS 67729 - 69279 1951 ## COG0593 ATPase involved in DNA replication initiation - Prom 69515 - 69574 3.7 + Prom 69615 - 69674 5.1 65 38 Op 1 . + CDS 69706 - 69840 218 ## PROTEIN SUPPORTED gi|15677735|ref|NP_274898.1| 50S ribosomal protein L34 66 38 Op 2 16/0.000 + CDS 69843 - 70181 137 ## COG0594 RNase P protein component 67 38 Op 3 18/0.000 + CDS 70181 - 70402 261 ## COG0759 Uncharacterized conserved protein + Prom 70406 - 70465 3.8 68 38 Op 4 . + CDS 70515 - 72158 2515 ## COG0706 Preprotein translocase subunit YidC + Term 72181 - 72223 4.1 - Term 72169 - 72210 7.3 69 39 Tu 1 . - CDS 72239 - 73048 1270 ## COG0796 Glutamate racemase - Prom 73076 - 73135 2.4 + Prom 73150 - 73209 5.3 70 40 Tu 1 . + CDS 73237 - 74328 1734 ## COG0012 Predicted GTPase, probable translation factor + Term 74342 - 74396 14.0 + Prom 74417 - 74476 6.3 71 41 Op 1 2/0.222 + CDS 74678 - 76552 1100 ## COG1835 Predicted acyltransferases + Term 76573 - 76607 5.5 72 41 Op 2 . + CDS 76614 - 77909 816 ## PROTEIN SUPPORTED gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 + Term 77920 - 77973 12.3 - Term 78315 - 78355 2.1 73 42 Tu 1 . - CDS 78416 - 79036 415 ## COG2020 Putative protein-S-isoprenylcysteine methyltransferase - Prom 79060 - 79119 1.7 74 43 Tu 1 4/0.037 - CDS 79212 - 79652 564 ## COG4969 Tfp pilus assembly protein, major pilin PilA - Prom 79717 - 79776 4.8 - Term 79718 - 79745 1.5 75 44 Tu 1 . - CDS 79789 - 80262 582 ## COG4969 Tfp pilus assembly protein, major pilin PilA - Prom 80300 - 80359 3.1 76 45 Tu 1 . - CDS 81571 - 83613 2618 ## COG1200 RecG-like helicase - Prom 83769 - 83828 4.8 - Term 83911 - 83942 2.1 77 46 Tu 1 . - CDS 83965 - 85080 1866 ## COG0136 Aspartate-semialdehyde dehydrogenase - Prom 85226 - 85285 6.0 + Prom 85126 - 85185 7.3 78 47 Op 1 13/0.000 + CDS 85389 - 85865 550 ## COG0802 Predicted ATPase or kinase 79 47 Op 2 . + CDS 85847 - 87106 1720 ## COG0860 N-acetylmuramoyl-L-alanine amidase + Term 87125 - 87187 16.3 + Prom 87329 - 87388 8.4 80 48 Tu 1 . + CDS 87572 - 89053 2217 ## COG0733 Na+-dependent transporters of the SNF family + Term 89192 - 89238 -0.0 + Prom 89201 - 89260 4.4 81 49 Tu 1 . + CDS 89510 - 89917 625 ## gi|261363944|ref|ZP_05976827.1| surface antigen + Term 89944 - 89986 9.1 - Term 90159 - 90188 1.1 82 50 Tu 1 . - CDS 90251 - 90823 467 ## COG2932 Predicted transcriptional regulator - Prom 90882 - 90941 5.1 - Term 90824 - 90869 5.8 83 51 Tu 1 . - CDS 90967 - 91329 181 ## gi|261363946|ref|ZP_05976829.1| toxin-antitoxin system, antitoxin component, Xre family - Prom 91404 - 91463 6.7 + Prom 91224 - 91283 4.8 84 52 Op 1 . + CDS 91450 - 91638 173 ## gi|296314022|ref|ZP_06863963.1| putative phage-related DNA-binding protein 85 52 Op 2 6/0.000 + CDS 91649 - 93640 1245 ## COG2801 Transposase and inactivated derivatives 86 52 Op 3 . + CDS 93680 - 94597 642 ## COG2842 Uncharacterized ATPase, putative transposase + Prom 94600 - 94659 4.9 87 52 Op 4 . + CDS 94687 - 94950 153 ## NMA1287 hypothetical protein 88 53 Tu 1 . + CDS 95077 - 95277 195 ## gi|261363952|ref|ZP_05976835.1| transcriptional regulator, ArsR family 89 54 Op 1 . + CDS 95400 - 95609 78 ## gi|261363953|ref|ZP_05976836.1| conserved hypothetical protein 90 54 Op 2 . + CDS 95606 - 95776 74 ## gi|261363954|ref|ZP_05976837.1| conserved hypothetical protein 91 54 Op 3 . + CDS 95773 - 95943 133 ## NMC1052 hypothetical protein 92 54 Op 4 . + CDS 95940 - 96413 473 ## gi|261363956|ref|ZP_05976839.1| conserved hypothetical protein 93 54 Op 5 . + CDS 96413 - 96610 188 ## gi|261363957|ref|ZP_05976840.1| conserved hypothetical protein 94 54 Op 6 . + CDS 96621 - 97064 362 ## gi|261363958|ref|ZP_05976841.1| hypothetical protein NEIMUCOT_03956 95 54 Op 7 . + CDS 97061 - 97888 501 ## HD0107 hypothetical protein 96 54 Op 8 . + CDS 97890 - 98291 345 ## BF1067 hypothetical protein 97 54 Op 9 . + CDS 98302 - 98823 773 ## COG4396 Mu-like prophage host-nuclease inhibitor protein Gam + Term 98856 - 98906 14.1 - Term 98843 - 98894 11.2 98 55 Op 1 . - CDS 98909 - 99124 475 ## NMA1292 hypothetical protein 99 55 Op 2 . - CDS 99128 - 99304 234 ## gi|261366034|ref|ZP_05978917.1| hypothetical protein NEIMUCOT_06654 100 55 Op 3 . - CDS 99308 - 99898 828 ## COG3561 Phage anti-repressor protein - Prom 100019 - 100078 1.6 101 56 Op 1 . - CDS 100095 - 100262 140 ## gi|261363965|ref|ZP_05976848.1| conserved hypothetical protein - Term 100300 - 100329 1.9 102 56 Op 2 . - CDS 100345 - 100515 75 ## gi|288575383|ref|ZP_06393681.1| conserved hypothetical protein - Prom 100615 - 100674 7.7 + Prom 100585 - 100644 7.4 103 57 Op 1 . + CDS 100679 - 101083 373 ## COG4382 Mu-like prophage protein gp16 104 57 Op 2 . + CDS 101080 - 101559 331 ## NMCC_1014 integral membrane protein + Term 101598 - 101629 2.1 + Prom 101645 - 101704 3.1 105 58 Op 1 . + CDS 101733 - 102239 359 ## ACICU_02150 hypothetical protein 106 58 Op 2 . + CDS 102236 - 102409 123 ## gi|261363969|ref|ZP_05976852.1| conserved hypothetical protein 107 58 Op 3 . + CDS 102412 - 102576 90 ## NMB0989 hypothetical protein 108 58 Op 4 . + CDS 102579 - 102821 144 ## NMCC_0932 hypothetical protein 109 58 Op 5 . + CDS 102787 - 103212 469 ## NMO_0891 putative phage associated membrane protein 110 58 Op 6 . + CDS 103109 - 103414 111 ## NMB1087 hypothetical protein - Term 103410 - 103440 3.3 111 59 Tu 1 . - CDS 103459 - 103629 248 ## COG3422 Uncharacterized conserved protein - Prom 103847 - 103906 3.3 + Prom 103545 - 103604 3.1 112 60 Op 1 . + CDS 103642 - 103860 197 ## NMC0974 putative phage related protein 113 60 Op 2 . + CDS 103857 - 104195 161 ## NMB1089 hypothetical protein 114 60 Op 3 . + CDS 104207 - 104473 246 ## NMO_0896 putative phage associated hypothetical protein 115 60 Op 4 . + CDS 104470 - 104667 298 ## NMA1311 hypothetical protein 116 60 Op 5 . + CDS 104669 - 105175 426 ## NMA1312 putative DNA-binding protein + Prom 105269 - 105328 3.4 117 61 Op 1 . + CDS 105429 - 107039 1370 ## NMA1313 hypothetical protein 118 61 Op 2 . + CDS 107043 - 107240 276 ## gi|261363982|ref|ZP_05976865.1| 30S ribosomal protein S3P + Term 107248 - 107285 7.3 119 62 Op 1 . + CDS 107291 - 108736 1412 ## DNO_0172 hypothetical protein 120 62 Op 2 . + CDS 108723 - 110018 1183 ## COG2369 Uncharacterized protein, homolog of phage Mu protein gp30 121 62 Op 3 . + CDS 110022 - 110321 307 ## gi|261363985|ref|ZP_05976868.1| putative glycine cleavage system H protein + Term 110325 - 110369 12.5 + Prom 110566 - 110625 7.1 122 63 Op 1 . + CDS 110746 - 111702 1010 ## Desal_2132 hypothetical protein 123 63 Op 2 . + CDS 111695 - 112024 520 ## gi|261363987|ref|ZP_05976870.1| putative oxaloacetate decarboxylase alpha chain 124 63 Op 3 . + CDS 112066 - 113055 1353 ## PFL_1998 hypothetical protein 125 63 Op 4 . + CDS 113114 - 113524 490 ## gi|261363989|ref|ZP_05976872.1| putative prophage protein gp36 126 63 Op 5 . + CDS 113528 - 113959 501 ## SYN_02301 mu-like prophage Flumu G protein 127 63 Op 6 . + CDS 113961 - 114425 473 ## gi|261363991|ref|ZP_05976874.1| conserved hypothetical protein 128 63 Op 7 . + CDS 114438 - 115196 1002 ## DNO_0752 hypothetical protein 129 64 Op 1 . - CDS 115344 - 115517 185 ## gi|261363993|ref|ZP_05976876.1| CDP-diacylglycerol--serine O-phosphatidyltransferase 130 64 Op 2 . - CDS 115514 - 115999 170 ## gi|261363994|ref|ZP_05976877.1| hypothetical protein NEIMUCOT_03996 - Prom 116019 - 116078 5.1 + Prom 115967 - 116026 4.0 131 65 Tu 1 . + CDS 116052 - 120107 4532 ## COG5283 Phage-related tail protein + Term 120147 - 120175 3.0 + Prom 120123 - 120182 1.7 132 66 Op 1 . + CDS 120208 - 120612 436 ## DNO_0756 hypothetical protein 133 66 Op 2 . + CDS 120659 - 122491 1457 ## DNO_0757 hypothetical protein 134 66 Op 3 . + CDS 122501 - 124189 1463 ## DNO_0757 hypothetical protein + Term 124204 - 124242 8.6 135 67 Tu 1 . + CDS 124255 - 124887 36 ## gi|288575392|ref|ZP_05976880.2| putative DnaJ domain protein + Term 124944 - 125011 7.1 + Prom 125824 - 125883 4.0 136 68 Op 1 . + CDS 125924 - 126232 192 ## RPSI07_0261 hypothetical protein 137 68 Op 2 . + CDS 126244 - 128124 1162 ## DNO_0760 hypothetical protein + Term 128147 - 128197 9.2 138 69 Op 1 . + CDS 128208 - 128438 338 ## gi|261364003|ref|ZP_05976886.1| conserved hypothetical protein 139 69 Op 2 . + CDS 128510 - 128848 304 ## gi|261364004|ref|ZP_05976887.1| conserved domain protein 140 69 Op 3 . + CDS 128838 - 129044 144 ## gi|261364005|ref|ZP_05976888.1| conserved hypothetical protein 141 69 Op 4 . + CDS 129061 - 129567 578 ## COG5511 Bacteriophage capsid protein 142 69 Op 5 . + CDS 129564 - 129929 275 ## gi|261364007|ref|ZP_05976890.1| conserved hypothetical protein + Term 129940 - 129974 6.9 143 70 Tu 1 . - CDS 129885 - 130091 65 ## gi|288575394|ref|ZP_06393689.1| conserved hypothetical protein - Prom 130224 - 130283 5.5 + Prom 130188 - 130247 4.6 144 71 Tu 1 . + CDS 130313 - 131089 448 ## COG0338 Site-specific DNA methylase + Term 131097 - 131125 1.0 - Term 131079 - 131117 3.6 145 72 Op 1 . - CDS 131217 - 131480 359 ## gi|261364010|ref|ZP_05976893.1| conserved hypothetical protein 146 72 Op 2 3/0.074 - CDS 131477 - 133342 1243 ## COG1353 Predicted hydrolase of the HD superfamily (permuted catalytic motifs) - Prom 133362 - 133421 3.1 - Term 133365 - 133414 -0.9 147 73 Tu 1 . - CDS 133458 - 134552 530 ## COG1367 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) - Prom 134607 - 134666 7.3 - TRNA 134958 - 135033 55.4 # Glu TTC 0 0 + Prom 135107 - 135166 4.8 148 74 Op 1 2/0.222 + CDS 135189 - 136088 1294 ## COG2974 DNA recombination-dependent growth factor C 149 74 Op 2 2/0.222 + CDS 136152 - 136568 727 ## COG4642 Uncharacterized protein conserved in bacteria 150 74 Op 3 . + CDS 136640 - 137206 958 ## COG0717 Deoxycytidine deaminase + Term 137267 - 137337 19.2 - Term 137263 - 137318 15.5 151 75 Op 1 . - CDS 137360 - 137731 152 ## HMPREF0659_A6101 hypothetical protein - Term 137787 - 137848 1.1 152 75 Op 2 . - CDS 137907 - 138563 1124 ## COG2095 Multiple antibiotic transporter 153 75 Op 3 19/0.000 - CDS 138575 - 139738 1336 ## COG0772 Bacterial cell division membrane protein 154 75 Op 4 3/0.074 - CDS 139731 - 141770 2263 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 155 75 Op 5 19/0.000 - CDS 141781 - 142284 497 ## COG2891 Cell shape-determining protein 156 75 Op 6 22/0.000 - CDS 142292 - 143131 896 ## COG1792 Cell shape-determining protein 157 75 Op 7 . - CDS 143143 - 144180 743 ## COG1077 Actin-like ATPase involved in cell morphogenesis - Prom 144231 - 144290 7.6 + Prom 144288 - 144347 4.9 158 76 Tu 1 . + CDS 144414 - 144704 442 ## COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit + Term 144777 - 144815 -0.1 + Prom 144761 - 144820 3.4 159 77 Op 1 . + CDS 144941 - 146152 393 ## Xaut_3733 hypothetical protein 160 77 Op 2 2/0.222 + CDS 146214 - 147671 432 ## PROTEIN SUPPORTED gi|163737840|ref|ZP_02145257.1| 30S ribosomal protein S4 161 77 Op 3 2/0.222 + CDS 147668 - 148543 697 ## COG2990 Uncharacterized protein conserved in bacteria + Prom 148566 - 148625 3.0 162 78 Op 1 . + CDS 148645 - 150075 2019 ## COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) 163 78 Op 2 . + CDS 150182 - 151189 1201 ## COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases + Term 151240 - 151291 8.1 + Prom 151279 - 151338 10.6 164 79 Tu 1 . + CDS 151436 - 153229 2540 ## COG0119 Isopropylmalate/homocitrate/citramalate synthases + Term 153266 - 153316 13.4 + Prom 153288 - 153347 6.7 165 80 Op 1 . + CDS 153376 - 157344 4052 ## COG0514 Superfamily II DNA helicase 166 80 Op 2 . + CDS 157454 - 158491 696 ## COG2801 Transposase and inactivated derivatives + Term 158712 - 158763 14.2 + TRNA 158621 - 158696 82.3 # Thr CGT 0 0 + Prom 158623 - 158682 80.0 167 81 Tu 1 . + CDS 158909 - 159334 235 ## gi|261364033|ref|ZP_05976916.1| conserved hypothetical protein + Term 159396 - 159466 27.9 - Term 159392 - 159441 17.0 168 82 Op 1 . - CDS 159447 - 160916 911 ## COG4928 Predicted P-loop ATPase - Prom 160942 - 161001 2.1 - Term 160942 - 160978 -0.9 169 82 Op 2 . - CDS 161056 - 162027 929 ## COG3547 Transposase and inactivated derivatives - Prom 162248 - 162307 5.6 - Term 162322 - 162370 14.2 170 83 Tu 1 . - CDS 162392 - 164287 2798 ## COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division - Prom 164341 - 164400 3.7 - Term 164621 - 164671 13.5 171 84 Tu 1 . - CDS 164714 - 165433 1253 ## COG0528 Uridylate kinase - Prom 165660 - 165719 6.4 - Term 165684 - 165724 3.5 172 85 Op 1 38/0.000 - CDS 165744 - 166598 695 ## PROTEIN SUPPORTED gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts - Term 166675 - 166705 1.8 173 85 Op 2 . - CDS 166720 - 167448 1223 ## PROTEIN SUPPORTED gi|225373956|ref|ZP_03751177.1| hypothetical protein NEISUBOT_02251 - Prom 167539 - 167598 3.6 174 86 Tu 1 . - CDS 167622 - 167864 385 ## NLA_2240 integral membrane protein - Prom 167903 - 167962 3.9 + Prom 167852 - 167911 3.4 175 87 Op 1 3/0.074 + CDS 167942 - 168532 622 ## COG0212 5-formyltetrahydrofolate cyclo-ligase 176 87 Op 2 1/0.296 + CDS 168632 - 169219 242 ## PROTEIN SUPPORTED gi|229209389|ref|ZP_04335820.1| acetyltransferase, ribosomal protein N-acetylase + Term 169335 - 169371 8.2 + Prom 169316 - 169375 4.8 177 88 Tu 1 . + CDS 169610 - 171085 2131 ## COG0579 Predicted dehydrogenase + Term 171101 - 171144 6.0 - Term 171404 - 171457 13.6 178 89 Tu 1 . - CDS 171494 - 172498 1420 ## COG3178 Predicted phosphotransferase related to Ser/Thr protein kinases - Prom 172528 - 172587 6.7 + Prom 172472 - 172531 4.6 179 90 Op 1 16/0.000 + CDS 172595 - 174976 2951 ## COG1452 Organic solvent tolerance protein OstA 180 90 Op 2 . + CDS 174973 - 175959 1431 ## COG0760 Parvulin-like peptidyl-prolyl isomerase + Term 175968 - 176015 12.1 - Term 176265 - 176304 0.5 181 91 Op 1 6/0.000 - CDS 176389 - 176850 279 ## COG3335 Transposase and inactivated derivatives 182 91 Op 2 . - CDS 176931 - 177239 243 ## PROTEIN SUPPORTED gi|148984739|ref|ZP_01818007.1| IS630-Spn1, transposase Orf1 - Prom 177271 - 177330 7.1 - Term 177299 - 177356 18.2 183 92 Tu 1 . - CDS 177376 - 177615 219 ## gi|288575414|ref|ZP_05976932.2| conserved hypothetical protein - Prom 177646 - 177705 2.4 + Prom 177581 - 177640 2.8 184 93 Op 1 . + CDS 177736 - 178362 290 ## COG0671 Membrane-associated phospholipid phosphatase 185 93 Op 2 . + CDS 178362 - 179312 705 ## COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold 186 93 Op 3 . + CDS 179387 - 180361 1506 ## COG0616 Periplasmic serine proteases (ClpP class) + Term 180369 - 180430 11.6 + Prom 180463 - 180522 6.3 187 94 Op 1 6/0.000 + CDS 180554 - 180976 289 ## COG3335 Transposase and inactivated derivatives 188 94 Op 2 . + CDS 180942 - 181403 287 ## COG3335 Transposase and inactivated derivatives + Term 181512 - 181570 -0.3 + Prom 181528 - 181587 4.2 189 95 Tu 1 . + CDS 181640 - 182257 896 ## COG1272 Predicted membrane protein, hemolysin III homolog + Term 182262 - 182322 12.7 + Prom 182294 - 182353 4.1 190 96 Op 1 . + CDS 182376 - 183269 896 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 191 96 Op 2 . + CDS 183293 - 183652 570 ## LHK_02230 hypothetical protein + Term 183655 - 183712 16.1 - Term 183649 - 183691 11.5 192 97 Tu 1 . - CDS 183730 - 183954 216 ## gi|225075511|ref|ZP_03718710.1| hypothetical protein NEIFLAOT_00524 - Prom 184122 - 184181 11.0 - Term 184128 - 184165 3.7 193 98 Tu 1 . - CDS 184193 - 184396 312 ## COG1278 Cold shock proteins - Prom 184514 - 184573 5.3 194 99 Op 1 . - CDS 184673 - 184876 156 ## PROTEIN SUPPORTED gi|149007011|ref|ZP_01830680.1| 50S ribosomal protein L7/L12 195 99 Op 2 . - CDS 184846 - 184992 73 ## gi|261365654|ref|ZP_05978537.1| putative transposase 196 99 Op 3 . - CDS 184965 - 185465 322 ## Aasi_1471 hypothetical protein - Prom 185500 - 185559 4.3 + Prom 185459 - 185518 6.8 197 100 Tu 1 . + CDS 185719 - 186717 1475 ## COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase + Term 186745 - 186801 16.3 + Prom 186719 - 186778 5.3 198 101 Op 1 . + CDS 186986 - 187864 731 ## CV_0489 hypothetical protein + Prom 187955 - 188014 4.0 199 101 Op 2 . + CDS 188123 - 188803 189 ## PROTEIN SUPPORTED gi|163756109|ref|ZP_02163225.1| 30S ribosomal protein S1 + Term 188831 - 188877 13.1 - Term 189055 - 189092 6.2 200 102 Tu 1 . - CDS 189119 - 189358 68 ## gi|288575425|ref|ZP_06393707.1| hypothetical DNA-binding protein - Prom 189380 - 189439 13.6 - Term 189704 - 189732 -1.0 201 103 Tu 1 . - CDS 189761 - 190630 1149 ## COG1560 Lauroyl/myristoyl acyltransferase - Prom 190658 - 190717 5.8 202 104 Tu 1 . - CDS 190760 - 191308 802 ## COG0817 Holliday junction resolvasome, endonuclease subunit - Prom 191331 - 191390 3.1 + Prom 191386 - 191445 3.0 203 105 Tu 1 . + CDS 191501 - 191836 186 ## gi|288575427|ref|ZP_05976951.2| major outer membrane protein IB + Prom 191916 - 191975 5.1 204 106 Tu 1 . + CDS 192060 - 193091 543 ## COG2801 Transposase and inactivated derivatives 205 107 Tu 1 . - CDS 193050 - 194024 736 ## COG0463 Glycosyltransferases involved in cell wall biogenesis - Prom 194116 - 194175 5.6 206 108 Tu 1 . - CDS 194202 - 195743 1009 ## PROTEIN SUPPORTED gi|145628098|ref|ZP_01783899.1| 30S ribosomal protein S20 - Prom 195877 - 195936 3.0 + Prom 195859 - 195918 4.9 207 109 Tu 1 . + CDS 195954 - 196652 926 ## COG0526 Thiol-disulfide isomerase and thioredoxins + Term 196668 - 196712 8.6 + Prom 196721 - 196780 3.6 208 110 Op 1 . + CDS 196847 - 198001 880 ## PROTEIN SUPPORTED gi|149915191|ref|ZP_01903719.1| 50S ribosomal protein L27 209 110 Op 2 . + CDS 198081 - 198269 158 ## gi|261364075|ref|ZP_05976958.1| conserved hypothetical protein 210 110 Op 3 . + CDS 198250 - 198864 482 ## COG4185 Uncharacterized protein conserved in bacteria 211 110 Op 4 . + CDS 198932 - 200353 1750 ## COG0215 Cysteinyl-tRNA synthetase + Term 200374 - 200415 10.6 - Term 200362 - 200403 10.6 212 111 Tu 1 . - CDS 200439 - 200954 403 ## COG0110 Acetyltransferase (isoleucine patch superfamily) - Prom 201075 - 201134 4.7 + Prom 201034 - 201093 6.2 213 112 Tu 1 . + CDS 201238 - 201453 387 ## PROTEIN SUPPORTED gi|240079841|ref|ZP_04724384.1| 50S ribosomal protein L31 + Term 201466 - 201520 12.0 + Prom 201460 - 201519 3.1 214 113 Tu 1 . + CDS 201623 - 203275 2173 ## COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - Term 203574 - 203604 3.0 215 114 Op 1 3/0.074 - CDS 203616 - 204104 641 ## COG0526 Thiol-disulfide isomerase and thioredoxins 216 114 Op 2 . - CDS 204101 - 204487 380 ## COG0824 Predicted thioesterase 217 114 Op 3 . - CDS 204487 - 204852 645 ## NGK_2595 VacJ-related protein - Prom 204958 - 205017 2.0 - Term 204969 - 205018 9.1 218 115 Tu 1 . - CDS 205042 - 207150 3026 ## COG1629 Outer membrane receptor proteins, mostly Fe transport - Prom 207287 - 207346 8.2 - Term 207339 - 207399 15.2 219 116 Tu 1 . - CDS 207413 - 207919 251 ## PROTEIN SUPPORTED gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 - Prom 207942 - 208001 3.7 - Term 207967 - 208018 14.1 220 117 Op 1 . - CDS 208049 - 208735 1069 ## COG0670 Integral membrane protein, interacts with FtsH - Prom 208772 - 208831 4.2 - Term 208869 - 208919 12.2 221 117 Op 2 . - CDS 208948 - 209769 648 ## gi|288575439|ref|ZP_05976970.2| conserved hypothetical protein - Prom 209934 - 209993 9.2 + Prom 209823 - 209882 5.9 222 118 Tu 1 . + CDS 210074 - 210715 941 ## COG0461 Orotate phosphoribosyltransferase + Prom 210738 - 210797 2.3 223 119 Op 1 . + CDS 210828 - 211289 633 ## NMC0344 hypothetical protein 224 119 Op 2 . + CDS 211286 - 212596 1981 ## COG0548 Acetylglutamate kinase + Term 212661 - 212696 -0.1 225 120 Tu 1 . + CDS 212986 - 213336 359 ## NLA_8450 transposase Predicted protein(s) >gi|257257259|gb|ACDX02000002.1| GENE 1 796 - 1695 411 299 aa, chain + ## HITS:1 COG:NMA1916 KEGG:ns NR:ns ## COG: NMA1916 COG0452 # Protein_GI_number: 15794801 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantothenoylcysteine synthetase/decarboxylase # Organism: Neisseria meningitidis Z2491 # 1 289 1 289 394 429 75.0 1e-120 MSKHILLGISGGIAAYKSCELVRLLKKQGHSVSVVMSTASTEFISPLTFQALSGNPVLTD THENGLGNGMAHINLTREADALVIAPATANTIAKISHGIADNLLTNLVAARKCPLAVAPA MNVEMWNNPANLRNIEQLRSDGITVFQPAYGEQACGEIGLGRMLEAADLADLISDLWIPK ILLGKRILITAGATFEAIDPVRGITNISSGQMGTALARACRAAGAKVTLIYGQLQTTIPT GLLHTEQTVSAEEMFRAVHNHITNQDVFISVAAVADYKVKNSSSQKIKKMVPVKFLLSN >gi|257257259|gb|ACDX02000002.1| GENE 2 2165 - 3382 1637 405 aa, chain - ## HITS:1 COG:NMB0564 KEGG:ns NR:ns ## COG: NMB0564 COG2871 # Protein_GI_number: 15676469 # Func_class: C Energy production and conversion # Function: Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF # Organism: Neisseria meningitidis MC58 # 1 405 1 405 405 786 98.0 0 MEIILGIVMFTVIVLALALMILFAKSKLVSEGDITIKVNDEKELTMPAGGKLLGALASQG IFVPSACGGGGSCGQCRVVVKSGGGDILPTELSHISKREAREGCRLSCQVNVKTDMDIEV PEEVFGVKKWECTVISNDNKATFIKELKLAIPEGEEVPFRAGGYIQIEAPPHTVAYKDFD IPKEYHEDWDKYNLWQYVSKVDEPILRAYSMASYPEEKGIIMLNVRIATPPPRVPDAPPG QMSSYIWSLKPGDKVTISGPFGEFFAKDTDAEMVFIGGGAGMAPMRSHIFDQLKRLNSKR KITFWYGARSKREMFYVEDFDQLAAEFPNFTWHVALSDPLPEDNWDGYTGFIHNVVYENH LKNHEAPEDCEFYMCGPPIMNQSVIKMLKDLGVEDENILLDDFGG >gi|257257259|gb|ACDX02000002.1| GENE 3 3396 - 3989 990 197 aa, chain - ## HITS:1 COG:NMB0565 KEGG:ns NR:ns ## COG: NMB0565 COG2209 # Protein_GI_number: 15676470 # Func_class: C Energy production and conversion # Function: Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE # Organism: Neisseria meningitidis MC58 # 1 197 1 197 197 305 96.0 3e-83 MEHYLSLFVKSVFIENMALSFFLGMCTFLAVSKKVSTAFGLGVAVTFVLGLSVPANQLVY SLLKDGAIVEGVDLTFLKFITFIGVIAALVQILEMFLDKFFPALYNALGIYLPLITVNCA IFGAVSFMAQREYNFGESVVYGFGAGLGWMLAIVALAGITEKMKYSDAPKGLKGLGITFI SAGLMAMAFMSFSGIQL >gi|257257259|gb|ACDX02000002.1| GENE 4 3993 - 4619 815 208 aa, chain - ## HITS:1 COG:NMA0749 KEGG:ns NR:ns ## COG: NMA0749 COG1347 # Protein_GI_number: 15793724 # Func_class: C Energy production and conversion # Function: Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD # Organism: Neisseria meningitidis Z2491 # 1 208 1 208 208 369 93.0 1e-102 MADMKRLKHLMFSPFIDNNPIALQVLGICSALAVTTKLQTAIVMGISVSLVTGFSSFFIS LVRNYIPNSIRIIVQMAIVASLVTLVDQLLQAYAYELSKQLSVFVGLIITNCIVMGRAEA FAMKEPPLESLVDGIGQGAGYGMLLIIIASIRELIGSGKLFGYTIFQTVQDGGWYQTNGL FLLAPSAFFIIGFLIWGLRTWKPEQAEK >gi|257257259|gb|ACDX02000002.1| GENE 5 4619 - 5395 1213 258 aa, chain - ## HITS:1 COG:NMA0750 KEGG:ns NR:ns ## COG: NMA0750 COG2869 # Protein_GI_number: 15793725 # Func_class: C Energy production and conversion # Function: Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC # Organism: Neisseria meningitidis Z2491 # 1 258 1 258 258 460 93.0 1e-129 MAKKFDKDSFSGTLIVVLAVSLICSVIVAGAVVGLKPVQEKQKVQDKQSYILSVAGLLDK NTDISKTFADRIEQRVVDLATGEYVKDALKDFSARVAAKDPAQSIQIKPEDDLAGIKSRA KYTEVYLVKGDDGKVNQIILPMHGNGLWSVMYGFVAIQPDGNTINGITYYDQGETPGLGG EIGNPLWQQKFVGKKLFDEQGKLALHVGKGASSDKEHGVDALSGASLTSKGVQGSFDYWF GENGYIPYLNKLKSAGAQ >gi|257257259|gb|ACDX02000002.1| GENE 6 5388 - 6620 1758 410 aa, chain - ## HITS:1 COG:NMA0751 KEGG:ns NR:ns ## COG: NMA0751 COG1805 # Protein_GI_number: 15793726 # Func_class: C Energy production and conversion # Function: Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB # Organism: Neisseria meningitidis Z2491 # 1 410 1 410 410 729 96.0 0 MGLKHFLEKIEPHFLPGGKHEKWYALYEAAATIFYTSGAVTRKAAHVRDALDSKRMMILV WLALFPAMFFGMYNVGAQAFGALTPDLLQQSIANDWHYALANALGINMSSEAGVLGKMLF GAIYFLPIYATVFAVGGFWEVLFATVRKHEINEGFFVTSILFALIVPPTLPLWQAALGIT FGVVVAKEVFGGTGKNFMNPALAGRAFLFFAYPANITGDTVWTAVDGYSGATALAQWAAN GSEGLKNAVTNQPITWMDAFIGNLPGSIGEVSTLALLIGGAFIVFARIASWRIIAGVMIG MIAMSSLFNVIGSDTNPMFSMPWYWHLVVGGFAIGMLFMATDPVSASFTNVGKWWYGALI GVMCVLIRVVNPAYPEGMMLAILFANLFAPIFDYFVAQANIKRRKARSNG >gi|257257259|gb|ACDX02000002.1| GENE 7 6623 - 7966 1787 447 aa, chain - ## HITS:1 COG:NMA0752 KEGG:ns NR:ns ## COG: NMA0752 COG1726 # Protein_GI_number: 15793727 # Func_class: C Energy production and conversion # Function: Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA # Organism: Neisseria meningitidis Z2491 # 1 447 1 447 447 874 96.0 0 MIKIKKGLDLPIAGRPEQAVYDGPAITEVALLGEEYAGMRPSMKVKEGDAVKKGQVLFED KKNPSVVFTAPASGKIAAIHRGEKRVLQSVVIAVEGDDEIEFERYAPDALANLSGEEVRR NLIQSGLWTALRTRPFSKIPAVDAEPFAIFVNAMDTNPLAADPVVVIKEAAEDFRRGLLV LSRLTERKIHVCKAAGADVPSENAANIETHEFGGPHPAGLSGTHIHFIEPVGANKTVWTI NYQDVIAIGCLFVTGRLNTERVVALGGPQVNKPRLLRTVLGAKVSQITAGELVNADNRVI SGSVLNGAIAQGAHDYLGRYHNQISVIEEGRSKELFGWVAPQPDKYSITRTTLGHFLKNK LFKFTTAINGGDRAMVPIGTYERVMPLDILPTLLLRDLIVGDTDSAQALGCLELDEEDLA LCSFVCPGKYEYGPLLRKVLETIEKEG >gi|257257259|gb|ACDX02000002.1| GENE 8 8332 - 9753 1136 473 aa, chain - ## HITS:1 COG:NMB0570 KEGG:ns NR:ns ## COG: NMB0570 COG1055 # Protein_GI_number: 15676475 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/H+ antiporter NhaD and related arsenite permeases # Organism: Neisseria meningitidis MC58 # 1 473 1 473 473 696 79.0 0 MRHLPILSLILFPTLSHAADFDGASLSLFWGAPFALILLSIALGPLFFAHTWHHHFGKIT AFWTLLFLVPFAAVFGFGASVHTVTHALVEEYIPFILLLLALYTISGGILVWGKLHGTPA LNTGLLAAGTVMASFMGTTGAAMLMIRPLLKANHYRKKKVHVVVFFIFLVANIGGGLTPL GDPPLFLGFLKGVDFMWTVKHMLMPVLISTVVLLLVFYIIDSRYHAREANEEQIQQEEEV EEDLRIAGKWNFLLLAGVVGSVLLSGLWKPDHPGFEILGSHYALQNLVRDVILLVLTIIS LLITPKQVRAGNEFNFDPIAEVGKLFLGIFITISPVLAILKAGEAGALGAVVSLVHDASG NPINTMYFWMSGLLSAFLDNAPTYLVFFNMAGGDAQALMTGHLFHSLLAISMGSVFMGAL TYIGNAPNFMVKAIAEQRGIPMPTFFGYMMWSVGVLIPLFILHTLIFFVLQLF >gi|257257259|gb|ACDX02000002.1| GENE 9 10165 - 11586 1911 473 aa, chain - ## HITS:1 COG:no KEGG:NGO1688 NR:ns ## KEGG: NGO1688 # Name: not_defined # Def: putative outer membrane protein OmpU # Organism: N.gonorrhoeae # Pathway: not_defined # 5 473 21 489 489 562 60.0 1e-158 MKTLLLLSLLAMSAAEAVDVSSETQNQPAPELQVKTAEPDPVEEETVKPAAETSSEKVVN VDAKTLLDNPQLLSRAMYSAVVSRNIAGIKVVLPIYEQWQGHDKNMALYARGLVAQNDGK MKEAIGYYRQFIAETPDAPVVRWQLATALFEDKQNEAAADQFDKLKTEPNLPEPFVKGIE SYRKALRERDSWKFNAGLSVTREQNINQAPSRRTYGNWTFPEPIDATAINYQLGAEKKWS LPKGWYATAGADNYGKIYPERTKYNDVTTRFSVGAGYADQRNDIGLTPFHERRFYGNDPY TYSSGARLHINRWWQPKLQTLSAVEMGRLKNTRRARSNNNNRLLSNSVVYYRNARQYWVG GFDIYQERNKEDKTDNFDRYSLRTAWGQEWGKGLSTMLRLSAAQRHYQTPSLLSGQENRR DKEADISLAVWHRAFHFKGITPRLTVAHHKTWSNDKYNEYGKTRMFVEFSKTF >gi|257257259|gb|ACDX02000002.1| GENE 10 12171 - 13001 1097 276 aa, chain - ## HITS:1 COG:NMB1539 KEGG:ns NR:ns ## COG: NMB1539 COG3039 # Protein_GI_number: 15677391 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS5 family # Organism: Neisseria meningitidis MC58 # 1 276 60 335 335 511 93.0 1e-145 MFKAVLLGQWHSLSDPELEHSLITRIDFNLFCRFDELSIPDYSTLCRYRNWLAQDDTLSE LLELINRQLTEKGLKVEKASAAVIDATIIQTAGGKQRQAIEVDEEGQVSGQTTPSKDEDA RWTKKNGLYKLGYKQHTRTDEEGYIEKLHITPANTHECNHLSPLLEGIAEGTTVYADKGY DSKENRQHLEEHQLLDGIMRKAHRNRPLTEDQIKRNRYLSKARYVVEQSFGTLHRKFRYA RAAYFGLIKVSAQSHLKAMCLNLLKAANRLNAPVAA >gi|257257259|gb|ACDX02000002.1| GENE 11 13874 - 14245 559 123 aa, chain - ## HITS:1 COG:no KEGG:MS0269 NR:ns ## KEGG: MS0269 # Name: not_defined # Def: hypothetical protein # Organism: M.succiniciproducens # Pathway: not_defined # 16 122 17 123 124 127 65.0 1e-28 MAKTKSLLATGILALFSATAFAAPLPAEIYLPAGAHTVKADRQGNGEFEYEAELPARGNP IPSLAKRVIAHARSKGFQVVESEIRNDDADLKFKRGAQELDVSIENKGHGRIEYKADLDL DKR >gi|257257259|gb|ACDX02000002.1| GENE 12 14499 - 14717 410 72 aa, chain + ## HITS:1 COG:NMA0623 KEGG:ns NR:ns ## COG: NMA0623 COG0597 # Protein_GI_number: 15793613 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Lipoprotein signal peptidase # Organism: Neisseria meningitidis Z2491 # 1 71 1 71 165 104 70.0 5e-23 MSSSLSKKTAYLLIALVGIALDQLTKWEILAHFQEGERLNIIPSFFDLTLAYNPGAAFSF LADQGGWQKFFS >gi|257257259|gb|ACDX02000002.1| GENE 13 14801 - 15016 277 71 aa, chain + ## HITS:1 COG:NMB1832 KEGG:ns NR:ns ## COG: NMB1832 COG0597 # Protein_GI_number: 15677668 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Lipoprotein signal peptidase # Organism: Neisseria meningitidis MC58 # 1 58 112 169 175 112 84.0 2e-25 MIIGGALGNVIDRLIHGHVVDFLLFYWKDWYYPAFNVADSFICVGAVLLVLDGLFHKKDP KPTDEPTTDNP >gi|257257259|gb|ACDX02000002.1| GENE 14 15043 - 16011 437 322 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227371337|ref|ZP_03854821.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SSU ribosomal protein S1P [Veillonella parvula DSM 2008] # 6 304 3 301 632 172 34 8e-42 MTQKTIILANPRGFCAGVDRAISIVERALEEFGAPVYVRHEVVHNKFVVDNLREKGAVFI EDLADVPKDAILIYSAHGVSKAVQQEAAERGFRVFDATCPLVTKVHKEVARLDAQDCEII MIGHKGHVEVEGTMGQLPPGRMLLVETVEDVAGLQVKNPDKLAYVSQTTLSVDETKDIIA ALNARFPNIRNPHKEDICYATTNRQTAVKELAEECDIVIVVGSPNSSNSNRLREVAAQRG VDAYMVDNAGYLQREWFEGKHKVGVTAGASAPEVLVREVLQTIQQWGHETIREGEGAEES IVFVLPKELRREGENKQILNKG >gi|257257259|gb|ACDX02000002.1| GENE 15 16158 - 16550 520 130 aa, chain + ## HITS:1 COG:no KEGG:UMN179_01902 NR:ns ## KEGG: UMN179_01902 # Name: not_defined # Def: hypothetical protein # Organism: G.anatis # Pathway: not_defined # 5 119 3 119 133 89 46.0 3e-17 MNPLRFLSLFTLAFLTACAATPEQLAARAQAQKQEEQNLQIHLAAQCDPETARLIQKQFE LTDNRSVQTTEQQKSFRLKYIDKVSDPMFQACYKMAWQNYISQQQLQEARYYYNYYDPWG YPFYRPPFWW >gi|257257259|gb|ACDX02000002.1| GENE 16 16655 - 17584 382 309 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 [Bacillus selenitireducens MLS10] # 18 304 19 309 317 151 34 2e-35 MKIWLGQHRTPDFPQGSAVTIGNFDGVHLGHKHILQKLKQEADARGLPVVVVIFEPQPKE FFARQTGKKQPYRISPLRTKLNLLEQTGCVDAVWVLRFNQTFADMDAQDFINLLLRKTLN TRYLLIGDDFRFGAGRRGDFELLATQPDIQTDRTPSVIVEDIRTSSTAVRNALSEGRLDY AKKLLGHDYTLSGKVKHGKKLGRTINAPTANIQLPPHHYALSGVFVVEVDGTFGTKRGVA SFGFNPTVSNNRVQKLEVHLFDFNENIYGQRLNVRFLHKLRDEKKFDSIAELKVQIEQDM KNARHWSET >gi|257257259|gb|ACDX02000002.1| GENE 17 17684 - 17878 189 64 aa, chain - ## HITS:1 COG:RSc2830 KEGG:ns NR:ns ## COG: RSc2830 COG3024 # Protein_GI_number: 17547549 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 4 62 3 61 71 77 61.0 4e-15 MTEVTTVKCPTCQKPVIWNEESKYRPFCSQRCRLIDLGEWAQEKYTVEAEEDDTLSDSIV GGLQ >gi|257257259|gb|ACDX02000002.1| GENE 18 17917 - 18198 203 93 aa, chain - ## HITS:1 COG:no KEGG:NMCC_1774 NR:ns ## KEGG: NMCC_1774 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_053442 # Pathway: not_defined # 1 93 1 93 93 160 91.0 2e-38 MENGYPNNRPSLEKRIFYLEHSGQYLMICALSDYSHNKHTVVMANFLYPNGTMDWRNLDD LFNELVLEELQSSFMDWYPTIEEAISHHLEGFS >gi|257257259|gb|ACDX02000002.1| GENE 19 18355 - 18984 252 209 aa, chain - ## HITS:1 COG:NMB0331 KEGG:ns NR:ns ## COG: NMB0331 COG0237 # Protein_GI_number: 15677989 # Func_class: H Coenzyme transport and metabolism # Function: Dephospho-CoA kinase # Organism: Neisseria meningitidis MC58 # 1 197 1 197 210 201 53.0 6e-52 MTLWIGLTGGIGSGKSQAAKIFSDLGVPHIDADALSRNLTADNGIALPAIRRLFGDKVFH TQNSLNRAALRDIVFRRPQAKKELEEVLLPLILNEIKLAKTCYPDAAYGIIDVPLLIENP DFLAVVDRVLVIDVSEATQILRVQQRSGLDTEEIKRIMNTQAKRQTRLIYADDVLENEGT LSELTKKIQGLHRFYLGYAGNSKFGTSLP >gi|257257259|gb|ACDX02000002.1| GENE 20 18986 - 19849 467 287 aa, chain - ## HITS:1 COG:NMB0332 KEGG:ns NR:ns ## COG: NMB0332 COG1989 # Protein_GI_number: 15676247 # Func_class: N Cell motility; O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, prepilin signal peptidase PulO and related peptidases # Organism: Neisseria meningitidis MC58 # 5 283 4 282 286 405 75.0 1e-113 MFESLDTLAPFAIPLSVVVGLLIGSFLNVVIYRVPVMMERGWTQFAKEHLQLELTEEEQQ PFNLMKPDSRCPKCHAPVKAWQNIPIVSYLMLGGKCGSCKTPISIRYPLIELLTGILFGV VAWQYGWTMAAFGGLILTAILIALTFIDADTQYLPDSLTLPLIWLGLLFNLNGTFVPLKS AVLGAVFGYMSLWLLCFIYKLLTGKIGMGNGDFKLLAALGAWLGVGILPVLVFMAALIGL VGAIIGRIAKGQYFAFGPSLAIAGWIILVVNEPVHRAVIWWLTKSGF >gi|257257259|gb|ACDX02000002.1| GENE 21 19851 - 21092 805 413 aa, chain - ## HITS:1 COG:NMA2155 KEGG:ns NR:ns ## COG: NMA2155 COG1459 # Protein_GI_number: 15795026 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulF # Organism: Neisseria meningitidis Z2491 # 10 413 9 410 410 558 70.0 1e-158 MAQAEQKKGLFAQKNKGKRFTFEGKNTNTDQLVRGEVVAKDEEEARKKLQRRGIRPLRIS KVKATKKRRITQEDITVFTRQLATMMKAGLPLMQAFEIVARGHSNPSMTEMLMQVRADVE QGSALGKSFAKYPKYFDRFYCNLIAAGEAGGVLESLLDKLAVYKEKTQAIKKKVKTALTY PISIVVVAIALIFVMMRWVLPEFGKVYAGMGAELPGLTQIVMDISKIFVEYGWLMIVMVI AFCFGVYKLHEKSPSFQKRIDAMVLRLPIFGQIVRKATIARWARTTSTLFAAGVPLVEVL DSVAGAAGNILYEEATQDIRAKVTQGLSLTSSMQSTDMFPNMVIQMAAIGEESGSLDDML NKAAEFYEDEVDNSVAQLSSLMEPIIMVVLGSIIGTLLVAMYLPLFNLGNVVG >gi|257257259|gb|ACDX02000002.1| GENE 22 21164 - 22843 876 559 aa, chain - ## HITS:1 COG:NMA2159 KEGG:ns NR:ns ## COG: NMA2159 COG2804 # Protein_GI_number: 15795030 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB # Organism: Neisseria meningitidis Z2491 # 1 559 1 558 558 918 80.0 0 MSIGLLRVLVQSQAINNTQAEHYNNILKTGQEILPMLFADKIISPRSLGELVARVFSYPL LDLHYYPRNNIVMDILTEEQMVQNRCVPIFRRGRKVYLAVSDPTQIQSFQKIAFASGVTV DLVVVPDDQLSSLLEWLGQRSTTILKEISEEQEAAQPSQALYIDNEEAEDGPIPRFIHKT LSDALNAGASDIHFEFYEQMARVRFRVDGQLREVVQPPVAVRGQLASRIKVMARLDISEK RVPQDGRIQIAFHKHGRPIDFRVSTLPTLFGEKVVMRILNSDAATLNIDQLGFEPFQKEM LLEAIHRPYGMVLVTGPTGSGKTVSLYTCLNILNTEDVNISTAEDPAEINLPGINQVNVN DKQGLTFAAALKSFLRQDPDIIMVGEIRDLETADIAIKAAQTGHMVFSTLHTNNAPATLS RMLNMGVAPFNIASSVSLIMAQRLLRRLCSSCKREVERPPVPALKKAGFTDEDLAKDWKL YRPVGCDSCRGKGFKGRVGVYEVMPITEEMQRVIMNNGTEVDIMNMAYKEGMVDLRRAGL LKAMQGLTSLEEVIAHTND >gi|257257259|gb|ACDX02000002.1| GENE 23 23131 - 23598 399 155 aa, chain - ## HITS:1 COG:PM0586_1 KEGG:ns NR:ns ## COG: PM0586_1 COG2913 # Protein_GI_number: 15602451 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Small protein A (tmRNA-binding) # Organism: Pasteurella multocida # 1 124 1 125 125 207 72.0 6e-54 MKLSIILPVIAALTVAACGNLSKVSKEGTTDNPVWPDAAKTTFRHDGTQHGTWPNWDNVR QIEAGMNKDQIYELIGRPHFQEGLYGVREWDYLFNYRENGEHKTCQYKILFDKDKNAQSF FWLPEGCGPKKSAPEVVREVIIREVAPAPAARIRQ >gi|257257259|gb|ACDX02000002.1| GENE 24 23666 - 24763 1026 365 aa, chain - ## HITS:1 COG:PM0714 KEGG:ns NR:ns ## COG: PM0714 COG5295 # Protein_GI_number: 15602579 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Pasteurella multocida # 231 365 2585 2712 2712 117 59.0 4e-26 MKHKAHMNRFTALNTAMSVSFAAFGLFAASAASAENYISISSDAGVQRPNYNNDGATDRF GMAIGVNTKATGHSGIAIGTSTTSAGESATAVGTLSNADGVAATAFGQGAQAVGNVTTAA GQKARATAQGATALGTGAVASAMYSTATGAASSASGQSSVAYGLQSKASANSAVAIGSRA TASHAGSVALGAGSETAEAVGTNSATVNGVSYSGFAGTNPRSTVSVGYAGGERTITNVAA GRISTTSTDAINGSQLYQVAARSQGNSTAITNLQNQVNGIGNRLNDMDKDLRAGIAGATA IAFLQRPNEAGKSMVSAAVGGYRNEQAIAVGYAHNSDNNKWSVKTGVSVNTRKDVNWGGS VGYQW >gi|257257259|gb|ACDX02000002.1| GENE 25 25585 - 26847 1041 420 aa, chain + ## HITS:1 COG:NMB0014 KEGG:ns NR:ns ## COG: NMB0014 COG1519 # Protein_GI_number: 15675962 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: 3-deoxy-D-manno-octulosonic-acid transferase # Organism: Neisseria meningitidis MC58 # 1 417 1 417 423 544 60.0 1e-154 MIRWLYNQLWHIAPLFIRCYLKKRAEKSTSYLEHWDERFGKKMSNPVHHPIWIHAVSVGE TRAAQPLIEALQNYFPDVPLLLTQMTPTGRCTAQALYPNAQCRYIPYDKPEWVEQFLNDH APRFGILMETEIWPNLMHMCAKQQIPLFLANARLSEKSQRGYLKIRGLVEPAMRTLSGCF AQTAEDAERLHLIGASNVHVCGNTKYDVSLPEWMKALAAAFKERIGNRPVVVCASTRFYK GQDEAEMLLEAWKRYKGDALLVIIPRHPERFQTTFSLAEDMGYRVQYRSDNLPIDKETQI WIGDSMGELFAYYLAADIAFVGGSLVDAGCQNVIEPISCGIPTLFGCSTYNFSAVCQDAI HAGAAEQVGSAERWYEKTTLWLTNPSEKERFSQKALEFIGKHQGASKRMADQIAKAVIRQ >gi|257257259|gb|ACDX02000002.1| GENE 26 26998 - 27219 314 73 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261363888|ref|ZP_05976771.1| ## NR: gi|261363888|ref|ZP_05976771.1| OmpA/MotB:Rickettsiasurface antigen [Neisseria mucosa ATCC 25996] OmpA/MotB:Rickettsiasurface antigen [Neisseria mucosa ATCC 25996] # 1 73 1 73 73 90 100.0 5e-17 MKKALTKTVTLIAIAASLSACAGMNQTQRNTATGAVLGGVAGNLIGGDTGSTLGGAALGG VIGSQVHHGHRYR >gi|257257259|gb|ACDX02000002.1| GENE 27 27457 - 28506 1206 349 aa, chain - ## HITS:1 COG:NMA2180 KEGG:ns NR:ns ## COG: NMA2180 COG0722 # Protein_GI_number: 15795051 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Neisseria meningitidis Z2491 # 1 348 1 348 351 630 87.0 1e-180 MTKQYPTDDIKIREVKELLPPIAHLYELPISDEAAGLVHRTRHEIADLVHGKDNRLLVII GPCSIHDTRAALEYAERLLVLRKKYEKELLIVMRVYFEKPRTTVGWKGLINDPHLDGTFD INYGLRQARSLLLTLNNMGMPASTEFLDMITPQYYADLISWGAIGARTTESQVHRELASG LSCPVGFKNGTDGNLKIAIDAIGAASHPHHFLSVTKAGHSAIVHTSGNPDCHVILRGGKE PNYSSEHVKSAAEQLIKAGLPPRLMVDFSHANSRKDYRRQMEVAQDVAAQLENGEDNIMG VMVESHLVEGRQDKPEVYGQSITDACIGWDTTEEMLALLAAANRKRVAP >gi|257257259|gb|ACDX02000002.1| GENE 28 28934 - 29995 682 353 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229232313|ref|ZP_04356740.1| (SSU ribosomal protein S18P)-alanine acetyltransferase [Cryptobacterium curtum DSM 15641] # 2 338 518 845 860 267 44 3e-70 MLVLGIESSCDETGVALYDTERGLLAHHLHTQMAMHAEYGGVVPELASRDHIRRVVPLTQ GCLQEAGVSYDDIDAVAYTQGPGLGGALLAGSGYANALAFALNKPVIPIHHLEGHLLSPL LADDKPEFPFVALLVSGGHTQFMAVRGIGDYTLMGESVDDAAGEAFDKTAKLLGLPYPGG AKLSELAKLGTPDAFSFPRPMLHSHDLQMSFSGLKTAVLTAVEKVRAENGGEIPEQTRND ICRAFQDAVIDVLAAKAQKALLDTGFRTLVVAGGVGANWKLRDEFSRLSVKQPSEKGKPK PKEEKIKVCFPPMEYCTDNGAMIAFAGAMRLQERQPAGAFNVKPRWPLSDIVK >gi|257257259|gb|ACDX02000002.1| GENE 29 30119 - 30553 846 144 aa, chain - ## HITS:1 COG:NMA0674 KEGG:ns NR:ns ## COG: NMA0674 COG1952 # Protein_GI_number: 15793657 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecB # Organism: Neisseria meningitidis Z2491 # 1 144 1 144 147 240 89.0 6e-64 MSEELQPVFSIERLFVKDLSLEVPNAPQIFLEQGEPEVDMRVSTNSEKLEEGYYNVDVTV TVTAKLNAERTMFLNEVTQSGIFRLENIPEEDVQLLLGVACPNILFPYAREAISTSVTRA GFPPVLLAPINFEAMYQQQQEGNA >gi|257257259|gb|ACDX02000002.1| GENE 30 30579 - 30836 383 85 aa, chain - ## HITS:1 COG:NMA0673 KEGG:ns NR:ns ## COG: NMA0673 COG0695 # Protein_GI_number: 15793656 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin and related proteins # Organism: Neisseria meningitidis Z2491 # 1 85 1 85 85 147 82.0 5e-36 MQTVTMYTGAFCPYCTMAKKLLHSLGVAEINEIRVDRSPEAFAEMQQLSGQRSIPQIFIG DTHVGGFTDLYGLHREGRLDSLLNP >gi|257257259|gb|ACDX02000002.1| GENE 31 31176 - 32669 2186 497 aa, chain + ## HITS:1 COG:NMB1791 KEGG:ns NR:ns ## COG: NMB1791 COG1530 # Protein_GI_number: 15677631 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonucleases G and E # Organism: Neisseria meningitidis MC58 # 1 497 13 509 509 890 94.0 0 MLSGIPIPKDAVRPPETVLVNITPQETRVAVLEENNICELHIERNSGHSLVGNIYLGVVR RVLPGMQSAFIDIGLERAAFLHIVDVLEQRRNPEETQRIEHMLFEGQSVLVQVIKDPINT KGARLSTQISLAGRFLVHLPQEDHIGISQRIEDDAERNSLRERLTNLLPEDACHGYIIRT NAENATDEQLQSDIHYLTKVWEHIQEQAKIQPPETLLYQDLPLSLRVLRDMFSLDTQKIL VDSTENHRRMTRFAEQYVHGALGRIELFKGERPLFETHNVEQEISRALQPRVNLNFGSYL IIESTEAMTTIDVNTGGFVGARNFDETIFRTNLEACHTIARELRLRNLGGIIIIDFIDMA QEAHREAVLQELAKALAFDRTRVTLNGFTSLGLVELTRKRSRENLSQILCEPCPSCQGRG RLKTPQTICYEIQREIVREARRYDVQSFRILAAPNVIDLFLDEESQSLAMLIDFIGKPIS LAVETAYTQEQYDIVLL >gi|257257259|gb|ACDX02000002.1| GENE 32 32992 - 33663 1268 223 aa, chain + ## HITS:1 COG:RSc3404 KEGG:ns NR:ns ## COG: RSc3404 COG0745 # Protein_GI_number: 17548121 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Ralstonia solanacearum # 1 220 1 219 221 248 62.0 9e-66 MRVLLAEDDNMIAQAVAANLKDSGYAVDWVKNGSQVSTALQAQNYDLLLLDLGLPGKDGL DVLTQIRHEGSKTPVLIVTARDDLHSRLNGLDGGADDYIVKPFDMAELQARMRAVLRRHS GHSQTLLTNGALTLNPATYQVEVKGEDKPVLLSNKEFAVLQALMMRPGIILSRSDLEDKI YGWGEEVESNAVDFLIHALRKKLGKEHIQNVRGVGWLVAKEVV >gi|257257259|gb|ACDX02000002.1| GENE 33 33730 - 35061 2071 443 aa, chain + ## HITS:1 COG:NMA0670 KEGG:ns NR:ns ## COG: NMA0670 COG0642 # Protein_GI_number: 15793653 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Neisseria meningitidis Z2491 # 23 441 1 416 416 457 61.0 1e-128 MHHFIQTLKQSLQVRISIALILMFLPLSIIAGAFSYYQTYHEAEELQDDLLRQTAAYINP KTTDYTQIGSENHILIQTFGQEDTVPLSNTLGEGFHTIKGGVDDDDGDDDDEYRAYIHQT PQGKIAVLQETEYRDDLAATAAYQSVLPLLIALPLMILLTVWITYRAMRPVKTLSASLGQ RRSDDLSPLDGEGVPSEIQGFVTAINQLLQRTGENIRRQQRFIADAAHELRSPLTALSLQ AERLTKLPQSDEAREQTGLILQSIQRNRHLLEQLLTHARAQGSETQRNLTDISLQAQFRR VLQELMPLALNKQQDIGVAVENDLRIRADDTEIYTLIKTFTDNAIRYTPAGGRIDIGFSE TPTTLTIWVEDDGPGIPAAERSRVTDAFYRILGTEQQGTGLGLSIADAIAKRYGGKLILA DSRNFAHGLLIQAELNKQLLQAD >gi|257257259|gb|ACDX02000002.1| GENE 34 35123 - 35869 256 248 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 9 243 4 238 242 103 32 8e-21 MSTQDLSGKIALVTGASRGIGAAIADTLAAAGAKVIGTATSESGAAAISERLAQWGGEGR ALNSAEPETIENLIADIEKEFGKLDILVNNAGITRDNLLMRMKEEEWDDIMQVNLKSVFR ASKAVLRGMMKQRAGRIINITSVVGVMGNAGQTNYAAAKAGLIGFSKSMAREVGSRGITV NCVAPGFIDTDMTRALPEETRKTFEAQTSLGKFGEAQDIADAVLFLASDQAKYITGQTLH VNGGMLMP >gi|257257259|gb|ACDX02000002.1| GENE 35 36146 - 37186 1308 346 aa, chain - ## HITS:1 COG:no KEGG:Psyc_1209 NR:ns ## KEGG: Psyc_1209 # Name: not_defined # Def: hypothetical protein # Organism: P.arcticum # Pathway: not_defined # 5 340 4 341 341 207 37.0 6e-52 MTTEQKTIILGMPADNQIYRVIEAALEYHGFNVVSVVMDNLNFRYPSLSSRLKVKFRQLV LRDKNAKKDFKSAQLIRDVENKLAAHGKADYALFIRGDIYSPEFLDMIKRHTRPGNMVNY QWDGIDRFPAIWDCADRFDRIYVFDPDDMRNLKHPFLPTTNFYFDHDINLPENPPNDFYF IGWHIPERAPIISAFGKAAETLGWKLDFNIGCLNTNVKKLRRFYPTENIKVFIGIRSFAD NLEAAKQAKILIDFKTPVHNGLSFRPFEALGYRKKLITTNAEIKKYDFYHPDNIFVWDGK SLDGLAEFVAKPYRELPPEIYQKYSFDNWLRYILDIPPHQKITLPE >gi|257257259|gb|ACDX02000002.1| GENE 36 37196 - 38206 856 336 aa, chain - ## HITS:1 COG:no KEGG:Psyc_1209 NR:ns ## KEGG: Psyc_1209 # Name: not_defined # Def: hypothetical protein # Organism: P.arcticum # Pathway: not_defined # 3 334 5 339 341 184 35.0 4e-45 MNKTIILVAPYMYGLDKCIEKNLRFHGFNVINLCYDDRDSYYPHIGCRILGLYHKLIKKD GDYKKKLKYSRYRKQIAEKLASLEGGKADYALCIRANIYPKEIISAIREHSKVCVNYQWD GIDRFPDIIEYLPYFDRCWVFNKNDVEKYPQHRFKATTNFYFDFPIEGNGKTEGLYFLGG YEAGREHQTSVFLDEARRLGLPLDFHIYCKDDRASKIFGYDGITYLDRQSILSFEQNLQK VKNCLAVVDFVQFENYGLSFRVFDALCFDKKLITSNQAVTECDFYHPDNIFIWDGESLDG LEDFFRRPYHPVSEEIKNKYAFGNWVRRILDISDEA >gi|257257259|gb|ACDX02000002.1| GENE 37 38351 - 42055 3569 1234 aa, chain - ## HITS:1 COG:alr3062 KEGG:ns NR:ns ## COG: alr3062 COG0463 # Protein_GI_number: 17230554 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Nostoc sp. PCC 7120 # 8 210 2 209 321 122 35.0 5e-27 MNHQAQSPAVSVMIPYYNCKEYIVETVQSVLSQSHQNFEIIIVDDGSDPEHADYLREFLA DKPAIRYAVQNNQGVAAARNHAARLAGGKYFLFLDSDDLILPDYIEKCVAVLENNPDCKL VYPLAEYFDAQEGLWNLPDYDGLESLLKGNRIPIISMHRAEDFVSLGGFDENLATHEDWD LWIRLLSNGGEVIRIPEVLFRYRKRRDGSSLINRLEQNPDLNREDWQKVYEKNRALFMQH HLGYSDCIQKISLLEQQIQSLSELNLQLREDNTKMQNQNQELQHVMAKLLQQTELSAEQT EFLQKQIEMLLRNSTVEEQLEEQEKQIKLLKKQINTLQQEKQSLEQNIHILNESRQSSEN IINELHSHRTQLERHIHEESRRLAKYKGLWTVKAFKPFVKTEQAISSANRYRKGFRLLVR EKGSIGKAYQFLRRHYKQTHSIKSVKQLLKTVGSSPVAAQEVLGIQADPIPQTFIQRLTK HAADTLAPKVAIIAELSIPQCKKYRVIQKQEMLEELGIPCSVTSWTDSNEAKKQISLASL VIFYRVPGFDSVMDLIAECRRLNIKTLWDVDDLIFDEDVLKTSSTINSLEPAEREGVING AKLYRQAMLACDEGIASTSGLAKAMKEAGLETVYLVENALDDETLAAANSIEGRLKKQED GLIRIIYGSGTKTHNIDFLEAAPALANILKENPNVRFRIIGYLELPEYFDDVQSQIERIP FCNYTEYLTYLSECDISIAPLENFVFNDAKSNIKYLEASITKVASVCSPRAAFADVIVNG ENGFLADSEQQWHEAFATLIQNPELRDSMAQAAYRTVTETYSPQAIGRKQLAAAVRPETF GSKKTKILSFNVYYHPQSFGGATIVAEQLNKLLADEEAYEIYAVTTLPMKSWLPPYSVIR YEYGKVTVFGVAVPSEDAAAHENPRFDAAVKDIIELVQPDIAHIHCIQSMGVGMVDICRE AGVKTLVTLHDAWWICPNQFMLDENEIFREQWNTEDERSKTIARALSKIDMLLAPSKYFA ELHERTLGRNVLVNKNGVTRPLGQISKRKKDVIRFGYVGGKTKIKGVHLILDAFRKHRFP NTELVVVDNMLNVGARSFFDSDFDGVERFRIEPAYSQDTIDYFFSEIDVLLFPTQWKESF GLTVREAVLRDVWVIATDAGGVSEDIIDGENGTVIPFDSGVEELSRAIAEVCERYQAMDD GAVIELPKSHIRTFAEQKDELAGLFQEILSNQAD >gi|257257259|gb|ACDX02000002.1| GENE 38 42168 - 44021 2262 617 aa, chain - ## HITS:1 COG:NMA0535 KEGG:ns NR:ns ## COG: NMA0535 COG1132 # Protein_GI_number: 15793530 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Neisseria meningitidis Z2491 # 1 617 1 617 621 959 77.0 0 MIEKLTFGLFTQEDSRSFMRLMAYIRPYKTRIIFALIAIFGVAATESYLAAFIAPLVNQG FAPPSAPPELNTAGGIIATLQNWKDQFTYLIWGTPNKVWVVPVFFIFLVIIRGISRFVST YLLTWVSVMAISHLRRDMFAKMLQLSSKFHQETPSGTVLMNMVQMAEQSISNASNVFIVL TRDTMIVIGLVCVLLYLNWQLSLVVALMFPLLSLLSRYYRNRLKDIIAGAQLSIGTMNNV VNEVHQGHRVVKLFGGQRQAAERFTAVNDTIVRLGKKITQATAARSPFSELIASFALAIV IFIALWQSQQGHTTIGEFMAFIVAMLQMLSPIKNLANISIPMQTMFIASDAVCQFLDTEP EKDNGTKILTNVEGRLKFDNVDVRYHADGKKALDSFNLDIRKGERVALVGRSGSGKSTAV NLLPRFVEPSSGAVYLDDVNIEDIKLDNLRSQFALVSQDVFLFEGTLLENVRYSRPDATE EEVLAALKAANLQDLVESSPHGLNQQIGANGNQLSGGQRQRVAIARAILKDAPILLLDEA TSALDNESERLVQQALERLMENRTSIIVAHRLTTVEQADRIIVMDDGHIVEQGSHDQLMA QNGYYAMLRNMPKQIAS >gi|257257259|gb|ACDX02000002.1| GENE 39 44481 - 45407 1101 308 aa, chain - ## HITS:1 COG:NMA0536 KEGG:ns NR:ns ## COG: NMA0536 COG0331 # Protein_GI_number: 15793531 # Func_class: I Lipid transport and metabolism # Function: (acyl-carrier-protein) S-malonyltransferase # Organism: Neisseria meningitidis Z2491 # 1 308 1 308 308 462 90.0 1e-130 MSFAFFFPGQGSQSLNMMDGFAGQSVVKNTFDEASAVLGQDLWVMINGTDADLIGQTVNT QPIMLAAGVAVYRAYLEADGKTPAVVAGHSLGEYTALVAAGALDFADAVKLVRLRAELMQ SAVPQGVGAMAAILGLEDEQVKAICAEAAQGEVVEAVNFNSPGQVVIAGNAAAVERAMNA AKEAGAKRALPLPVSVPSHCSLMKPAAEKLAEALKTVEIKQPQIRVIHNADVAAYNDADK IKDALVRQLYSPVRWTETVNALVAEGITESAECGPGKVLAGLAKRINKEAACSALTNSEQ VAAFIEAH >gi|257257259|gb|ACDX02000002.1| GENE 40 45427 - 46716 1310 429 aa, chain - ## HITS:1 COG:PA1960_2 KEGG:ns NR:ns ## COG: PA1960_2 COG3326 # Protein_GI_number: 15597156 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Pseudomonas aeruginosa # 328 407 79 148 170 72 46.0 2e-12 MNHNKHHGTIAHWFGEMSRGSIICDKSSQRIFANRQSLHPDYQEPETGHRVSFQIETENN RAVARDVERVNPGYKNNDSAVITLTDWDCSKNGGYGMDVSNEGQPVFVLGQFLADQTRTP RAGDRLEGTLRRHPNGQWLLVNAVIRSTPESEPEPESIHAAPAKKENVQTIHFFRPEHGP KVQAKIEQPLVAETRYPAPKSAQKNLLPPNQVMSGTITTWDDAKGYGFIRFGDESQNIFF HISAYHYNTCRPQTGQRVSFYCNRPIEGNRQQAIKVVRLGDESHLFDELPPDHNRLNIDM QALLINSVIAVVFLTVVAVLSNKLFFIYVLISIAAFILYQQDKQTAIESARKIRRKNEYQ NRIPENKLHAFSLLGGWPGALVARAAFRHKTKKVPFVQIFWLTVAINVAITYALLIHYAD NPLTNFLKN >gi|257257259|gb|ACDX02000002.1| GENE 41 47136 - 47876 477 246 aa, chain + ## HITS:1 COG:no KEGG:APJL_1740 NR:ns ## KEGG: APJL_1740 # Name: tolA2 # Def: colicin import membrane protein # Organism: A.pleuropneumoniae_JL03 # Pathway: not_defined # 69 243 302 444 449 64 28.0 5e-09 MTYLSRAFSLSILAVALAACGSSGGDSPSTQATNNAKPQTPATQPPTDQTAGNAPKEPKL TLTTMPDKSAKRLYELPYSTVTGITQTKPQANGYTGEVTDIQISGTPTLESALPKMGKVV YYGDAFNERTDPVEGTIGYGTSPGSLEYTIDFDERTGHGKISALQLDFGDIMLRQGKLEK INLDGQEVMGVRSNVDVARSGNPDNPEYAPAGNYELGVFGPNADSIAGKLKNSAFDIGFG GTRDGK >gi|257257259|gb|ACDX02000002.1| GENE 42 48275 - 49486 1185 403 aa, chain + ## HITS:1 COG:SMb20766 KEGG:ns NR:ns ## COG: SMb20766 COG3385 # Protein_GI_number: 16265206 # Func_class: L Replication, recombination and repair # Function: FOG: Transposase and inactivated derivatives # Organism: Sinorhizobium meliloti # 2 350 3 331 387 256 40.0 6e-68 MYSISRFQQIIKPIMHGRFQKHVQQHQADKYSKGFNCHSLLISMVYAHLTHCNSLRTLEQ SFNAHSHHHYHLNLRRRIRRSTLSEALAKRDTRPFTDMLRELMATCSRTLRKRTQDTADL LYLLDSTPIILKGRGFDQWVSSNGRISGLKVHVLMNHANGCPTVQSITEASVNDIDQRHI VQPEKGATYVFDKGCCDYNWWAELDRAGAYFVTRLKANAAVEVIEQFSPSETQNAHENSH NDNNPPPILTDEYIRFKHKSNSTRPNHYHNKTLRRITVEREGTEALVLVSNNLTASAQEI AENYKRRWQIELLFKWLKQHLKLKRFLGRSANAVKLQLLCAMMAYLLLKLYQQCTTHSND SLHLLCARIAGGLFEREKTMYGHYADIRRERREWIDRVQGRLI >gi|257257259|gb|ACDX02000002.1| GENE 43 49788 - 50750 1226 320 aa, chain - ## HITS:1 COG:NMB1916 KEGG:ns NR:ns ## COG: NMB1916 COG0332 # Protein_GI_number: 15677747 # Func_class: I Lipid transport and metabolism # Function: 3-oxoacyl-[acyl-carrier-protein] synthase III # Organism: Neisseria meningitidis MC58 # 1 320 1 320 320 545 86.0 1e-155 MQYAKILGTGSYLPANRVSNDDLAKKVDTSDEWITTRTGIKFRHIADESEKTSDLAAEAS RRALVSAGVAADEIDLIIVATATPDMQFPSTATIVQQKLGIENGCPAFDVQAVCAGFMYA LSTANAYIKSGMAKKALVIGAETFSRIVDWNDRTTCVLFGDGAGAVVLGASDEAGIIHSK LKADGNYLDLLNVPGQIANGQVCGSPYVKMDGPGVFKFAVKMLAKIADEVISEAGYTPDQ INWLVPHQANKRIIDATAKHLGLDMEKVILTVQEHGNTSAASIPLALDVGIQNGQIKRGQ NLLLEGIGGGFAWGAVLVKY >gi|257257259|gb|ACDX02000002.1| GENE 44 50951 - 51676 365 241 aa, chain - ## HITS:1 COG:NMB1925 KEGG:ns NR:ns ## COG: NMB1925 COG1385 # Protein_GI_number: 15677755 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 1 240 1 240 241 350 72.0 1e-96 MSRFYLPDALYAGQVVELPDNVVRHLNVLRVRCGEEVVLFNGNGKAYPARLDVLEKRRAC AEVLREEETDNESPLKITLVQSVSSGERMDFTLQKSVELGVVAIQPVISERCVVRLSGER ADKRVARWQEIVVSACEQSGRNIVPEVRPLLPYREALKQMSSETTKLLMSLNRAQSLRAV KPFSDDLIFMVGPEGGWTDEEEQLAFEAGFQSVTLGKRVLRTETASLAAIAAMQTLWGDF V >gi|257257259|gb|ACDX02000002.1| GENE 45 51852 - 52547 1051 231 aa, chain + ## HITS:1 COG:NMA0529 KEGG:ns NR:ns ## COG: NMA0529 COG0483 # Protein_GI_number: 15793526 # Func_class: G Carbohydrate transport and metabolism # Function: Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family # Organism: Neisseria meningitidis Z2491 # 1 231 34 264 264 409 87.0 1e-114 MLSEADLAAQTAFAAALPLLIDSPMLGEEMSVQEQTTLWKMHAHTDGLWVVDPIDGTNNF VNGLPHFAVSVAFVKNGRAELGIIYNPVSGECFYAERGKGAYLNGTRLPLRTVDKKLSEA IAGVEIKYLRSGKLTSRMSTLAPFGTIRSMGSSTLDWCYLASGRYDVYIHGGQKLWDYAA GALIFEEAGGNLSTLEGDDFWSGEHVFKRSVIAALQPALFERWEKWIRENQ >gi|257257259|gb|ACDX02000002.1| GENE 46 52750 - 52983 163 77 aa, chain + ## HITS:1 COG:no KEGG:Deima_1226 NR:ns ## KEGG: Deima_1226 # Name: not_defined # Def: hypothetical protein # Organism: D.maricopensis # Pathway: not_defined # 4 69 31 96 124 78 57.0 7e-14 MPEVIRQVRRLHENGHMLYLWSSGGADYARRSAEELGISECFQAFLPKPNAYIDDQAVHE WRFCTHFLPINSGQIDQ >gi|257257259|gb|ACDX02000002.1| GENE 47 53115 - 54695 2217 526 aa, chain - ## HITS:1 COG:NMA1182 KEGG:ns NR:ns ## COG: NMA1182 COG0138 # Protein_GI_number: 15794127 # Func_class: F Nucleotide transport and metabolism # Function: AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) # Organism: Neisseria meningitidis Z2491 # 1 526 1 530 530 1024 96.0 0 MPSIKRALISLSDKNGVVEFAQTLHKLGVEILSTGGTAKLLADAGVPVIEVADYTGFPEM LDGRVKTLHPKIHGGILGRRDLGEHVAKMEEHGIGNIDLVCVNLYPFAATIAKPNCTLED AIENIDIGGPTMVRSAAKNWKHVAIVTDTADFPAVAAEMEANGGALSDKTRFNLSRKAFS HTAQYDGMISNYLTSLSDDVLSGTPEIGEFPSQFNQSWIKVQDMRYGENPHQRAAFYRDV YPAAGSLAAYKQLQGKELSYNNIADADAAWEAVKSFDAPACVIVKHANPCGVAVAADTLT AYKLAYATDTTSAFGGIIAFNREVDGETVKQITDNQFMEVLMAPKFTAEALEIAAAKKNV RVLEVPLEAGANRFELKRVGGGLLVQTPDIHRISRADLKVVSKRQPTEQEWNDLLFVWNV AKYVKSNAIVFGKGGQTYGIGAGQMSRVDSTRIAARKAQDAGLDLNGACAASDAFFPFRD GVDVIAEQGIKAIIHPAGSMRDQEVFDAADEHGIAMVVTGIRHFRH >gi|257257259|gb|ACDX02000002.1| GENE 48 55017 - 55682 861 221 aa, chain + ## HITS:1 COG:NMA1335 KEGG:ns NR:ns ## COG: NMA1335 COG1462 # Protein_GI_number: 15794260 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized protein involved in formation of curli polymers # Organism: Neisseria meningitidis Z2491 # 17 221 19 223 223 325 79.0 6e-89 MYRKFLCIFATAALAAGCATESSKTIEAVKVSSYNTPYHGARAPISIGSFDNRSTYQRGV FSDGEDRLGSQAKTILLTHLQQTNRFNVLNRTQLSALKQEAGIGGKTQALKGADYVITGD VTEFGRKDVGDHQLFGILGRGKSQVAYAKVALNVVDVRTSEVVYSAQGAGEFSLSNREVV GFGGTAGYDATLNGKVLDLAIREAVNNLVAGIESGAWTPAR >gi|257257259|gb|ACDX02000002.1| GENE 49 55696 - 56055 491 119 aa, chain + ## HITS:1 COG:NMA1334 KEGG:ns NR:ns ## COG: NMA1334 COG4259 # Protein_GI_number: 15794259 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 10 119 12 123 123 102 51.0 1e-22 MDKLIKTGCLGAFCLLLAACGSPQQTLYYWGNNNADVYERLKSDGKPLGEQIDAMEKYFQ KTRSENKKEAPGTHAHLGMLLSEAGQDQSAAEHFETEKRLFPESSVFMDFLLKNKGAQK >gi|257257259|gb|ACDX02000002.1| GENE 50 56052 - 56723 678 223 aa, chain + ## HITS:1 COG:YPO2970 KEGG:ns NR:ns ## COG: YPO2970 COG4380 # Protein_GI_number: 16123151 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 7 217 6 213 218 222 60.0 3e-58 MSSLKTALFASATAVILSACSATAPQPFDYSAFRESKPRSILVLPPLNESPEVKASAGML ASSTQPLAESGYYVFPVAAVAETFKQNGMDNAHDIHQVSLEKLNRIFGADAVLYIKINQY GTSYQLIQSDTRVTAEAKLVDAKTGKELWHGSATASSTENNNTAGQGLLGAMLSAIVQQI ASSIGDKGFDIAQVAGTRLLSASATNGIMYGPYSPHYETQPGK >gi|257257259|gb|ACDX02000002.1| GENE 51 56898 - 58124 1058 408 aa, chain - ## HITS:1 COG:NMB0982 KEGG:ns NR:ns ## COG: NMB0982 COG0038 # Protein_GI_number: 15676874 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Neisseria meningitidis MC58 # 29 408 1 380 380 566 81.0 1e-161 MKETHKLWVTLIITGIIGGMVGIVLTEIMHTIQHLAYGYGSDGLYVSFREGVSQASPARR IGVMAFCGAVVGLGWWLLKRHGRPQPSIKAVVKNPLAGFPFFETVSHALLQIITVGLGSP LGREVAPREMTAAFASVGVNRFGLSEDDARLVIACASGAGLAAVYNVPLASTLFILEAML GLWTQQAIAAALLTSVIATAVARIGLGDVQQYHPTNLSINTSLLWFSAIIGPILGATAVF FQRTAQKFPFVKRDNVKIIPLSVCMFALIGVISIWFPEILGNGKAGNQLTFGGLTDWQHS LELTAVKWFVVLLALAAGAYGGLITPSMMLGSTVAFAAAAAWNTFFPAMSSESAAVIGAA AFLGVSLKMPLTAIVFILELTYAPSALLMPLCITMAGAVATARKMGFE >gi|257257259|gb|ACDX02000002.1| GENE 52 58176 - 58994 709 272 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261363915|ref|ZP_05976798.1| ## NR: gi|261363915|ref|ZP_05976798.1| hypothetical protein NEIMUCOT_03897 [Neisseria mucosa ATCC 25996] hypothetical protein NEIMUCOT_03897 [Neisseria mucosa ATCC 25996] # 1 272 1 272 272 536 100.0 1e-151 MKYMIALLLAASPVLASAAPNNDKAAVQAAIAQYYNRPLAAHNCQLTEPPKDSGTASDNI MYCMKPVADHSVTRNGKATRYVLYTGFAYDMKYKLKQNAHASSGLAELFVLEKTDGKWTI KQHGKDEIGAWGDVPENKAWQFVQVGAQNWGYAVESGYTGQGETTTGENFLFTDNSNRVR KSLIINGNDNGAYFGDCDELKGREKRNCKDRYTSLEAKIAFDKSRPAVSGVWALTAKLSG VSGKKNYKNQKYIFPYNGKTHVAPKNYPLGGQ >gi|257257259|gb|ACDX02000002.1| GENE 53 59250 - 60113 763 287 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|42631297|ref|ZP_00156835.1| COG0697: Permeases of the drug/metabolite transporter (DMT) superfamily [Haemophilus influenzae R2866] # 1 274 1 276 290 298 50 1e-79 MFYQVLALIIWGSSFIAAKYSYEMLDAALMVEARLLIAALMVLPSCYRHFGKIPRREWKP LLWIAFINYVVVLLLQFIGLKYTSAASAITMVGLEPLLVVFVGHFFFNDKARIYHWICGA AAFVGIGMMVLGGAEEGGAVDWFGCLLILLAGIGFAGVMRPSREMIARIGAPAFTSASMA AAAVLCLPFSLVLAESYEVRWSWGGVLSVLYLGVGCSWLAYLLWNKGMNKVPANVSGLLI SLEPVIGVIMAVLILGEHLSAVSASGVFIVIASTFVVGWLSNRGKSA >gi|257257259|gb|ACDX02000002.1| GENE 54 60125 - 60370 399 81 aa, chain - ## HITS:1 COG:NMA1632 KEGG:ns NR:ns ## COG: NMA1632 COG2901 # Protein_GI_number: 15794526 # Func_class: K Transcription; L Replication, recombination and repair # Function: Factor for inversion stimulation Fis, transcriptional activator # Organism: Neisseria meningitidis Z2491 # 1 79 1 79 79 137 84.0 5e-33 MKQTIPDIAQCVEQNLQQYFKDLNGTEPCGVYDMVLHQVEKPMLICVMEQCGGNQSKAAV ILGLNRNTLRKKLLQHGLLEG >gi|257257259|gb|ACDX02000002.1| GENE 55 60495 - 61499 775 334 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145632364|ref|ZP_01788099.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae 3655] # 1 323 28 350 353 303 49 5e-81 MRIGGYIIDNPIALAPMAGITDKPFRRLCRDFGAGWAVCEMLTSDPTLRNTRKTLRRSDF ADEGGIVAVQIAGSDPQQMADAARYNVSLGAQVIDINMGCPAKKVCNVQAGSALMQNEPL VAAILEAVVRAVDVPVTLKTRLGWHDDHKNLPAIARIAEDCGIAALAVHGRTRTQMYKGE AAYDLIAETKGRLKIPVWVNGDITSPQKAATVLKQTAADGIMIGRGAQGRPWLFRDLKHY AEHGVLPPALSLAECNATILNHVRAMHAFYGEVAGVRIARKHIGWYIDAMPDGEQTRRDI NRLDSAAAQYDTLAAYLEMLSEKTDRWVCEYREG >gi|257257259|gb|ACDX02000002.1| GENE 56 61658 - 62308 740 216 aa, chain - ## HITS:1 COG:NMB1731 KEGG:ns NR:ns ## COG: NMB1731 COG1994 # Protein_GI_number: 15677577 # Func_class: R General function prediction only # Function: Zn-dependent proteases # Organism: Neisseria meningitidis MC58 # 1 212 1 212 212 260 65.0 1e-69 MFQNFDLGTVLLAIPPVLLALTIREVARGYTALRWGDSTAQQYGRLTLNPLPHIDPVGTI VVPIISLLLTPFVFGWARPMPIDPRNFRDPRRAWRWVSISGPIANLILAFFWGFVAAFAV YAPESYQEPLVRMAQYGVIVNAIWVAFSLIPILPWDGGIFIDTFLSAKQSMQFRKIEPYG MWIVLILMFTGLLAKIILPIVALIQTAVYLFMTLLI >gi|257257259|gb|ACDX02000002.1| GENE 57 62505 - 62978 573 157 aa, chain - ## HITS:1 COG:NMB0708 KEGG:ns NR:ns ## COG: NMB0708 COG1466 # Protein_GI_number: 15676606 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, delta subunit # Organism: Neisseria meningitidis MC58 # 16 156 191 331 332 228 83.0 3e-60 MPPAKKSTNSPCCTRKNHTVNIADAEAAVANVARFDVFQLSGAWMKGDALRVARLLDGLE EEGEEPVLLLWAVAEDIRTLIRLTAALKQGQSVQSVRNSLRLWGDKQTLAPIAVKRIPTV RLIEALKTCAKIDRIIKGAEDGDAWTEFKQLVTGLAV >gi|257257259|gb|ACDX02000002.1| GENE 58 62587 - 63507 361 306 aa, chain - ## HITS:1 COG:NMB0708 KEGG:ns NR:ns ## COG: NMB0708 COG1466 # Protein_GI_number: 15676606 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, delta subunit # Organism: Neisseria meningitidis MC58 # 5 192 4 191 332 290 77.0 3e-78 MAVMNIEQVSADMPLSPLYIIHGEEDLLRIEALDTLRAAAKKQGYLNREVFTADNGADWD ELLQSAGSAGLFADLKLLEIHIPNGKPGKNGGDALQTFAEHLPEDTVSLILLPKLEKAQT QAKWFTALAAKGTVLEAKAISAQALPQWIKGRLKKVGLDIEPDALALFAERVEGNLLAAR QEIDKLALLHPQKPYRQHRRCRSRRRQRRPFRRVPAFRRMDERRCPARRPPLGRTRRRRR RTRLAAVGGCRRHPHPHPPDRRAQTRAERAIRPQQPAPVGRQTNPRADCRQTHSHRPPDR SAENLR >gi|257257259|gb|ACDX02000002.1| GENE 59 63507 - 63986 745 159 aa, chain - ## HITS:1 COG:NMA0912 KEGG:ns NR:ns ## COG: NMA0912 COG2980 # Protein_GI_number: 15793877 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rare lipoprotein B # Organism: Neisseria meningitidis Z2491 # 1 158 1 158 159 183 58.0 1e-46 MNKILMTAAVLLLSACGFHLKGMGGTARTLPYPAWHIQNASVMQKALENALRRADGKPVS AAEAQMTLHIKNIETRQDIYTITRAALVNEYLLTLRVEAQAMRNGEPVGEPMTILVNRTM DYNDSEVLGKQEESETIWAEMRADAADQIVRRLTFLKAY >gi|257257259|gb|ACDX02000002.1| GENE 60 64144 - 65079 1426 311 aa, chain + ## HITS:1 COG:NMB0927 KEGG:ns NR:ns ## COG: NMB0927 COG0596 # Protein_GI_number: 15676821 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Neisseria meningitidis MC58 # 1 305 1 305 310 528 81.0 1e-150 MHPIREPIRSGLLQVSDIHQIYWEESGNPDGLPVIFLHGGPGAGASPACRGFFNPDVFRI VIIDQRGCGRSLPYACTDDNTTWDLVADIEKVREMLGIEKWLVFGGSWGSTLSLAYAETH PERVAGLVLRGIFLCRPSEMAWLDEAGGVSQIYPAQWQKFLAPVAEEKRGSLIAAYHEML FGEDEAGRLKAAKAWADWESYLIRFEPQDVDEDAYQSLAIARLENHYFVNEGWLKGDKAI LANTDKIRHIPTIIVQGRYDLCTPMQSAWELSQALPDAELRVIQAGHSSFDPPLAAALVE AVEDMRERAVW >gi|257257259|gb|ACDX02000002.1| GENE 61 65343 - 65762 585 139 aa, chain + ## HITS:1 COG:no KEGG:NMC0659 NR:ns ## KEGG: NMC0659 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 139 1 139 139 230 92.0 1e-59 MDNQTKLRIGGLLVLTTAVLSLLIVLIVDSWPLAILLAVIIVAAAAGGFVWTSRRQQRQF IERLKKFDIDPEKGRINEANLRRMYHSGGQHQKDAVTLVCLSQKCSVDEAHAMFKKRPTR QEMNQMAAQQARGQKRPHR >gi|257257259|gb|ACDX02000002.1| GENE 62 65860 - 66384 763 174 aa, chain + ## HITS:1 COG:NMA0915 KEGG:ns NR:ns ## COG: NMA0915 COG1714 # Protein_GI_number: 15793880 # Func_class: S Function unknown # Function: Predicted membrane protein/domain # Organism: Neisseria meningitidis Z2491 # 3 168 2 167 170 213 69.0 2e-55 MTSLPPATIKRRLAALMYELLLTGAVTAIAAILAGIAAIFLNPVSQLLSSLATCVILVGS WWLYFKTNWTKTGRTLAMQTWKIGLHGRNGTLPPLSQLRIRFIWACIFVVFIPLLAYAGL RHLLAIPPVPAFGAALIWLILPWGFALLNPDRQFLYDFLAGTRLVDLKQETSES >gi|257257259|gb|ACDX02000002.1| GENE 63 66477 - 67580 1751 367 aa, chain - ## HITS:1 COG:NMB1902 KEGG:ns NR:ns ## COG: NMB1902 COG0592 # Protein_GI_number: 15677733 # Func_class: L Replication, recombination and repair # Function: DNA polymerase sliding clamp subunit (PCNA homolog) # Organism: Neisseria meningitidis MC58 # 1 367 1 367 367 630 89.0 1e-180 MLILQADRDSLLKPLQAVTGIVERRHTLPILSNVLLESKDGQTKLLATDLEIQINTAGPE SQAGDFRITTNAKKFQDILRALPDSAIVSLDWADNRLTLRAGKSRFALQTLPAEDFPLMS VGEDISAAFSLSQETFKTMLSQVQYSMAVQDIRYYLNGLLMQVEGSQLRLVATDGHRLAY AASQIEAELPKTEVILPRKTVLELFKLLNNPSEPISVELLNNQVRFQCNGTTIVSKVIDG KFPDFNRVIPLDNDKIFLVSRTQLLGALERAAILANEKFRGARLFLQPGLLSVVCSNNEQ EEAREELEIAYQGGELEVGFNIGYLMDVLRNIHSDDMQLAFGDANRSTLFTVPNNPNFKY IVMPMRI >gi|257257259|gb|ACDX02000002.1| GENE 64 67729 - 69279 1951 516 aa, chain - ## HITS:1 COG:NMA0552 KEGG:ns NR:ns ## COG: NMA0552 COG0593 # Protein_GI_number: 15793546 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication initiation # Organism: Neisseria meningitidis Z2491 # 1 516 1 518 518 864 86.0 0 MTLAEFWPQCLRRLHDILPAGQFAQWIAPLTVGEENGVWVVYGKNQFACNMLKSQFAAKI EVVRAELAPLQAAFAFKAGVGQHYEMAENAGAVAPEHTALTEEMPKADAQESFSDETSSE NADKPSVAKTAADILAQRMKNLPHENKQPAAAPAESKVVAKAKTEAQRDAEEARYEQTNL SRDYTFDTLVEGKGNRLAAAAAQAIAENPGQGYNPFFLYGSTGLGKTHLVQAIGNELLKN RPDAKVRYMHSDDYIRSFMKAVRNNTYDVFKQQYKQYDLLIIDDIQFIKGKDRTMEEFFY LYNHFHNEKKQLILTCDVLPAKIEGMDDRLKSRFSWGLTLELEPPELEMRVAILQKKAEA AGISIEDEAALFVANLIRSNVRELEGAFNRVSASSRFMNRPVIDMDLARTALQDIIAEKH KIITADTIIDATAKYYRIKISDILGKKRTRNIARPRQVAMSLTKELTTLSLPSIGDAFGG RDHTTVMHGVKAVAKLREEDPELAQDYEKLLILIQN >gi|257257259|gb|ACDX02000002.1| GENE 65 69706 - 69840 218 44 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15677735|ref|NP_274898.1| 50S ribosomal protein L34 [Neisseria meningitidis MC58] # 1 44 1 44 44 88 100 2e-16 MKRTYQPSVTKRKRTHGFLVRSKTRGGRAVLAARRAKGRKRLAV >gi|257257259|gb|ACDX02000002.1| GENE 66 69843 - 70181 137 112 aa, chain + ## HITS:1 COG:NMB1905 KEGG:ns NR:ns ## COG: NMB1905 COG0594 # Protein_GI_number: 15677736 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RNase P protein component # Organism: Neisseria meningitidis MC58 # 1 109 1 109 121 149 79.0 2e-36 MDYRFGKQYRLLKTDDFSSVFAFKNRRSRDLLQVSQSADNGLNHPRLGLVVSKKTAKRAH DRNYMKRVIRDWFRLNKNSLPPHDFVVRVRLAFNRQNAAEARNQLAQLMRKR >gi|257257259|gb|ACDX02000002.1| GENE 67 70181 - 70402 261 73 aa, chain + ## HITS:1 COG:NMA0549 KEGG:ns NR:ns ## COG: NMA0549 COG0759 # Protein_GI_number: 15793543 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 13 73 36 96 96 120 95.0 7e-28 MNTLLSKFILALIRFYQYAISPLIPPRCRYTPTCSQYAVEAVKKYGAFKGGWLAVKRIAR CHPFGGHGHDPVP >gi|257257259|gb|ACDX02000002.1| GENE 68 70515 - 72158 2515 547 aa, chain + ## HITS:1 COG:NMA0548 KEGG:ns NR:ns ## COG: NMA0548 COG0706 # Protein_GI_number: 15793542 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YidC # Organism: Neisseria meningitidis Z2491 # 1 547 1 545 545 974 89.0 0 MDFKRLVAFFAISLAIFAGWEHFFPSPKPNPAQQAAQQQQQTAATAAAEAALAPATPITV TTDTVKAVIDEKSGDLRQMTLLKYKANGDENKAFTLFNDSKEYTYVAQSELLDAQGNNIL KGVNFTAAQKEYSLNGDKVEVRLSAPETNGLKIDKVYTFTKDSYLVNVRFDITNSSGKPV NLSADYRIVRDHSEPEGQGYFTHSYLGPVVYTPEDKFQKVSFSDLDDDAKSGKNEAEYAR KTQTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCRIDIKRRNDNLYSTSVSVPLAAIQNG AKAEASINLYAGPQTTSVIANIADNLQLAKDYGKVHWFASPLFWLLNQLHNIIGNWGWAI VVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYGDDRMAQQQAMMQLYKDEKIN PLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITDLSRSDPYYILPVIMAVTMFAQ TFLNPPPTDPMQAKMMKVMPLVFSAMFFFFPAGLVLYWVVNNLLTIAQQWHINRSIDKQR AQGEVVS >gi|257257259|gb|ACDX02000002.1| GENE 69 72239 - 73048 1270 269 aa, chain - ## HITS:1 COG:NMA2026 KEGG:ns NR:ns ## COG: NMA2026 COG0796 # Protein_GI_number: 15794906 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glutamate racemase # Organism: Neisseria meningitidis Z2491 # 5 269 6 270 270 468 89.0 1e-132 MTTSKQRPIGVFDSGVGGLTNVRALMERLPMENIIYFGDTARVPYGTKSRATIETFAMQI VDFLLENDVKALVIACNTIAAVAGQKIRQKAGNMPVLDVISAGAQAALNTTRNNKIGIIA TNTTVNSNAYARAIHAQNPDTLVRTQATPLLVPLVEEGWLDHEVTRLTVREYLKPLLVDD IDTLVLGCTHFPLLKPLIGKEAQNVALVDSAITTAEATAQALAQAGLLNTENDSPDYRFY VSDIPLRFRTIGERFLGRSMEQIEMVSLG >gi|257257259|gb|ACDX02000002.1| GENE 70 73237 - 74328 1734 363 aa, chain + ## HITS:1 COG:NMA0618 KEGG:ns NR:ns ## COG: NMA0618 COG0012 # Protein_GI_number: 15793608 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted GTPase, probable translation factor # Organism: Neisseria meningitidis Z2491 # 1 363 1 363 363 699 99.0 0 MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNP QKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIVHVAGKVD PIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQKLVDLCKKLLPHLDEGKPVRS FGLDAEELAMLKPLFLLTAKPAMYVGNVAEDGFENNPHLDRLKELAEKENAPVVAVCAAM ESEIAELEDDEKAEFLAEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT APQAAGVIHTDFERGFIRAQVISYDDFVSLGGEAKAKEAGKMRVEGKEYVVQDGDVMHFL FNV >gi|257257259|gb|ACDX02000002.1| GENE 71 74678 - 76552 1100 624 aa, chain + ## HITS:1 COG:NMA0619_1 KEGG:ns NR:ns ## COG: NMA0619_1 COG1835 # Protein_GI_number: 15793609 # Func_class: I Lipid transport and metabolism # Function: Predicted acyltransferases # Organism: Neisseria meningitidis Z2491 # 1 467 1 465 465 751 81.0 0 MSKVLSYRPDIDTLRAIAVLSVVAFHIEKNWLPGGFLGVDIFFVISGFLITMIIHREMSQ GIFSFKTFYIRRIKRILPAFFAVLTATLIGGFLLFTKDDFFLLWKSALAALGFASNLYFA KGQGYFDPAQEEKPLLHIWSLSVEEQYYFVFPIFLLLVVRKSWRVQFGFLITLCALSLAA SFMPSSLDKYYLPHLRACEMLVGSLTAVWMQYQQQQKLYIGKQYAAAGALLSVCILFACL FAYTEQTAYFPGPAALIPCMTSAALIYFNHFEHPLKKFFQWKITVAIGLISYSLYLWHWP ILAFMHYIGPDNLPPYSTAAAIVLMLVLSLISYYFIEKPFKNWKGSFVQSVSWIYALPML ILTVGSFFAMKLPFMAQYDRMGLARSYTSCHNNTDKQCLWGDTKKQPELLILGDSHADQY KTFFDSVGKKEKWSATMVSADSCAYVEGYSARVFKKNASCRAVYQYAKEHLPRYSKVLLA MRWGSQMPENSNSLSYDNDFFKKFDTMLQTLSSEKQIVYLMTDNQTLSYNALRAYMLSSR IPGYNQNLHSDDEATTKGNIRIRELAAKYPNVYIIDAAAHIPKDFKIDGLPVYSDKDHIN PYGGIELAKLFSEENKLLDTHHSH >gi|257257259|gb|ACDX02000002.1| GENE 72 76614 - 77909 816 431 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 [Phaeobacter gallaeciensis BS107] # 7 385 13 384 418 318 43 9e-86 MSVIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQ AGHTPIALVGGATGMIGDPSFKAVERSLNSAETVAGWVESIRNQLKPFLSFEGENAAIMA NNADWFGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIERDDVGISFTEFAYSLLQGYDFA ELNKRHGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGAV WLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGTKPEAQRILA EEMTRLIHGEAALQAAQRISESLFAEDQSSLTESDFEQLALDGLPAFEVSDDLNVVEALV KTGLASSNKEARGFVNSKAVLLNGQAAELNNPNHAAERPDDAYLLTDAHKRFGKYTIVRR GKRNHALLVWK >gi|257257259|gb|ACDX02000002.1| GENE 73 78416 - 79036 415 206 aa, chain - ## HITS:1 COG:mll1752 KEGG:ns NR:ns ## COG: mll1752 COG2020 # Protein_GI_number: 13471701 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Putative protein-S-isoprenylcysteine methyltransferase # Organism: Mesorhizobium loti # 43 201 15 173 178 104 38.0 1e-22 MKLNYRQLALELTMKIMTVTALSYFIKTVLENYMMTRNPVVLLLLVGECITVFLVVFSKF TDTRNFSPLPVLATMGATFYFFAIALGGGIKLISDNVASALLVFGICWQIYAKIYLGRSF GLLPACRTVVDTGPYRLVRHPIYFGYFIGHVTFLLNNFSLWNIEVLTLLYLLQFLRMNYE EQVLSQNEQYREYKSRVKNRFIPFLL >gi|257257259|gb|ACDX02000002.1| GENE 74 79212 - 79652 564 146 aa, chain - ## HITS:1 COG:NMA0264 KEGG:ns NR:ns ## COG: NMA0264 COG4969 # Protein_GI_number: 15793282 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, major pilin PilA # Organism: Neisseria meningitidis Z2491 # 3 143 5 143 170 73 36.0 2e-13 MKQQGFTITELMIVVAILGILAAIALPLFGNYTAKAQATEGHEILAGLKSPLVEAISTEG INACDTTKPWFTSSVHTGNFVNDVALEKTETQCLLTVTFKSGGVNDKITNKKINIRYTVG TGVWECGTDVDKELRTASCQGDLLSL >gi|257257259|gb|ACDX02000002.1| GENE 75 79789 - 80262 582 157 aa, chain - ## HITS:1 COG:NMB0018 KEGG:ns NR:ns ## COG: NMB0018 COG4969 # Protein_GI_number: 15675966 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, major pilin PilA # Organism: Neisseria meningitidis MC58 # 1 154 1 150 170 90 42.0 1e-18 MKAIQKGFTLIELMIVVAIIGILAAIALPMYGDYTARAQATEGYELLGGMKTPLVEAVAA SSNAIACKNNAPWYTSSVQSGKYVSAIEPAVKGETCVLTATFKAASAGVNDKVAEKHIAM TLTPKTGAWSCGTDLDKNVAPAACRDALAAAPANPAQ >gi|257257259|gb|ACDX02000002.1| GENE 76 81571 - 83613 2618 680 aa, chain - ## HITS:1 COG:NMB1788 KEGG:ns NR:ns ## COG: NMB1788 COG1200 # Protein_GI_number: 15677628 # Func_class: L Replication, recombination and repair; K Transcription # Function: RecG-like helicase # Organism: Neisseria meningitidis MC58 # 1 680 1 680 680 1212 93.0 0 MMTPETQKQLKITDVSAKKLDKLNLHTAWDLVLHLPLRYEDETHIMPIKDAPIGVPCQVE GEVIHQEVTFKPRKQLIVQIADDSGSVLFLRFIHFYASHQKQMAAGKRIRAVGEIKHGFY GDEMIHPKIRDAESSGLAESLTPIYPTVNGLNQPTLRRIIQTALDVTPLHDTLPDALLGR LKLPHLAESLRLLHSPPPSFTIHQLSDGALPAWQRLKFDELLAQQLSMRLARQKRVSGTA AALGGDGTLTQALRHALPFALTDAQERVVSEIRRDMAQTHPMHRLLQGDVGSGKTIVAAL SALTAIESGAQAAVMAPTEILAEQHFIKFKQWLEPLGLEVVWLSGSQRKKAKDEAKAKLA DGTVKIAVGTHALFSDDVEFQNLGLVIVDEQHRFGVAQRLALKNKGRDVHQLMMSATPIP RTLAMSFFADLDVSVIDQLPPGRTPIKTRLVNNIRRAEVEGFVLNICRKGQQAYWVCPLI EESETLQLQTATETLEQLQAALPELNIGLVHGRMKAAEKAEVMAQFAAGRLNVLVATTVI EVGVDVPNAALMVIEHAERMGLAQLHQLRGRVGRGAAESVCVLLFAEPLSELAKARLKVI YEHTDGFEIARQDLNIRGPGEFLGARQSGVPMLRFANLEEDLHLLEQAREIAPMLIEQNP EIVEAHLARWLASREGYLGV >gi|257257259|gb|ACDX02000002.1| GENE 77 83965 - 85080 1866 371 aa, chain - ## HITS:1 COG:NMA0351 KEGG:ns NR:ns ## COG: NMA0351 COG0136 # Protein_GI_number: 15793362 # Func_class: E Amino acid transport and metabolism # Function: Aspartate-semialdehyde dehydrogenase # Organism: Neisseria meningitidis Z2491 # 1 371 1 371 371 735 98.0 0 MKVGFVGWRGMVGSVLMQRMQEENDFAHIPEAFFFTTSNVGGAAPDFGQAAKTLLDANDV AELAKMDIIVTCQGGDYTKSVFQPLRDSGWNGYWIDAASSLRMKDDAIIVLDPVNRNVID DGLKNGVKNYIGGNCTVSLMLMALGGLFQNDLVEWATSMTYQAASGAGAKNMRELISGMG AIHAKVADELADPSSAILEIDRKVSDFLRSEDYPKANFGVPLAGSLIPWIDVDLGNGQSK EEWKGGVETNKILGRSDNPTVIDGLCVRIGSMRCHSQAITLKLKKDLPVSEIEAILAGAN DWVKVIPNEKEASIHELTPAKVTGTLSVPVGRIRKLGMGGEYISAFTVGDQLLWGAAEPL RRVLRIVLGSL >gi|257257259|gb|ACDX02000002.1| GENE 78 85389 - 85865 550 158 aa, chain + ## HITS:1 COG:NMB0457 KEGG:ns NR:ns ## COG: NMB0457 COG0802 # Protein_GI_number: 15676368 # Func_class: R General function prediction only # Function: Predicted ATPase or kinase # Organism: Neisseria meningitidis MC58 # 1 151 1 151 153 224 72.0 5e-59 MSEGATFSRRLPDEESTLKLGESWAKSLRAPLVIHLQGDLGAGKTTFTRGILRGLGHTGA VKSPTYAIVESYPLEAFTLHHFDLYRFASPEEWEDAGLDDLFSPDSVCIIEWPQQGGAFT PPADITVSLNHAAQGRICTATAHTANGQKSLEAWLNSN >gi|257257259|gb|ACDX02000002.1| GENE 79 85847 - 87106 1720 419 aa, chain + ## HITS:1 COG:NMB0456 KEGG:ns NR:ns ## COG: NMB0456 COG0860 # Protein_GI_number: 15676367 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylmuramoyl-L-alanine amidase # Organism: Neisseria meningitidis MC58 # 5 419 3 416 416 617 75.0 1e-177 MVKFKLTRRQVVRQTVGLLFTLTPIASALAKAAPPAQFVAARIWPSHAYTRITIESSRAL QYQHFALENPGRLVVDIQNANINSVLQGISGKVLPDDPYIRSIRAGQNTPTTVRVVIDLK QNAHPQVFSLAPVGGFKNRLVIDLYPHGVDANDPMMALLNGNPPKRMQTQRPAERTNIAQ DTPARSNRGGRRPVVMIDPGHGGEDPGAIGPSGLKEKNVVLSIAREAKNRLESIGYTVYM TRNEDIFIPLGVRVAKARARNADVFVSIHADAFTSPSARGTGVYMLNTKGATSSAAKFLA QTQNNADAIGGVLKSGNRSVDNAILDMTQTATMRDSRKLGHSVLTELGKLNQLHKGRVDE ANFAVLRAPDIPSILVETAFLSNPTEERLLGSDSFRRQCADAIATGIQKYVNNAVLRRG >gi|257257259|gb|ACDX02000002.1| GENE 80 87572 - 89053 2217 493 aa, chain + ## HITS:1 COG:NMA0470 KEGG:ns NR:ns ## COG: NMA0470 COG0733 # Protein_GI_number: 15793471 # Func_class: R General function prediction only # Function: Na+-dependent transporters of the SNF family # Organism: Neisseria meningitidis Z2491 # 1 493 19 511 511 802 87.0 0 MVAAIGSAVGLGNIWRFPYIAFENGGGAFLLPYLVALLTAGIPLLLLDYAIGHRYRGSAP LAFRRLGRWFEPVGWWNVMTNVIICIYYAVIIGWSASYAYYSLNAAWGADPQAFFFKDFL NMSGPEALGLDFVGKVVGPLIGVWLFTCIIMALGVQKGVAGASSFFMPLLLIMFIIMVGI SLTLPGAAKGLDALFTPDWSKLSDPKVWVAAYGQIFFSLSICFGIMVTYSSYLKKKTDLG GTGLVVGFANSSFELLAGIGVFAALGFMAQAKGQAVSEVASSGIGLAFIAFPTIINQAPM GALIGILFFGSLVFAGITSMISIVEVIVAAIQDKLNIGRVNATLLVCIPMGIISTLLFGT TTGLPVLDVLDKFVNTYGIVAAGFVYVLAIIALRKLPELRNHLNALSSVRVGAIWTACVI FTVAMLGYMLYQDTIGLLKENYSKYPDDFLNIFGWGMSIGLIVIAVLLSLLPWKHGQNFN VKDEHEHEQGDQE >gi|257257259|gb|ACDX02000002.1| GENE 81 89510 - 89917 625 135 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261363944|ref|ZP_05976827.1| ## NR: gi|261363944|ref|ZP_05976827.1| surface antigen [Neisseria mucosa ATCC 25996] surface antigen [Neisseria mucosa ATCC 25996] # 1 121 1 121 135 145 100.0 8e-34 MTMKPLMAVLLAASLSLPSINAEARGTDNQRKATLIGAAAGAALGGLLGNDEQSAFIGAV AGGLAGNAYAYRNKKMNQKDNDSYWYDRRYHDYRYDRDGYDYDDPYYREARYKRHKHYYR KYRDWYNDYYDYNDD >gi|257257259|gb|ACDX02000002.1| GENE 82 90251 - 90823 467 190 aa, chain - ## HITS:1 COG:NMA1884 KEGG:ns NR:ns ## COG: NMA1884 COG2932 # Protein_GI_number: 15794772 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Neisseria meningitidis Z2491 # 1 190 49 234 234 286 70.0 1e-77 MQESTGCDLNWLLTGKGLPYLDSARPENVGAFPVSDTAAGAVDTLGNPVDLREFVFIPRY SVEAAAGHGQTVSDEKPLFCMAFRRYWIENYVTRQTDKLSVIAVKGDSMEGILNHGDNIL INHAETEPRDGLYVLRIGNDLFVKRVQRMPGKLLVTSANPHYAPFEIDLSHTDDDIAIVG RVEWFGRSVN >gi|257257259|gb|ACDX02000002.1| GENE 83 90967 - 91329 181 120 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261363946|ref|ZP_05976829.1| ## NR: gi|261363946|ref|ZP_05976829.1| toxin-antitoxin system, antitoxin component, Xre family [Neisseria mucosa ATCC 25996] toxin-antitoxin system, antitoxin component, Xre family [Neisseria polysaccharea ATCC 43768] toxin-antitoxin system, antitoxin component, Xre family [Neisseria mucosa ATCC 25996] toxin-antitoxin system, antitoxin component, Xre family [Neisseria polysaccharea ATCC 43768] # 1 120 1 120 120 227 100.0 2e-58 MDNSFELSSKLLGERLKKIRTDNGYSREQLSELFGISRASIQNYENGERSPNADYLVQFY KHFGINLHWLLTGNKAAKFQDFIDSVSSPREEVLLHLARQMDSRTLNHLIDFLMDVYAKK >gi|257257259|gb|ACDX02000002.1| GENE 84 91450 - 91638 173 62 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|296314022|ref|ZP_06863963.1| ## NR: gi|296314022|ref|ZP_06863963.1| putative phage-related DNA-binding protein [Neisseria polysaccharea ATCC 43768] putative phage-related DNA-binding protein [Neisseria polysaccharea ATCC 43768] # 1 62 1 62 62 112 100.0 9e-24 MGTKTVNEVREWLKDNNLTVAQWARENGHNSVDVTRVLTGKSKCRYGQGRAIAIKLGLRI DE >gi|257257259|gb|ACDX02000002.1| GENE 85 91649 - 93640 1245 663 aa, chain + ## HITS:1 COG:NMB1081 KEGG:ns NR:ns ## COG: NMB1081 COG2801 # Protein_GI_number: 15676962 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Neisseria meningitidis MC58 # 1 662 1 660 661 1222 91.0 0 MGITIGELLKLNIQGLPTTARGLRERAKTQNWPYIEEVGKARGGRLKKYLIASLPAEIRA AIMKRQSDELAEKMPKTLPQVRPGTAMSAQALAEAAKLLNEKQRSVADARCAVVAAVLGI KYQYGCSAKAAVAQFLGLLAEGKLDAVTLGNLEKANDRSRSAKVGERTLDGWISAYLKAE NATERLVALAPKTTKAVKPIESYGWLPMFMQFHNIPSAPKLAHSYRRFVQWAEAENMPVN DVPNLSMVRRVWDKLPLIMQERGRKTGAAYKSLLPYVKRDWGALKPNDVWIGDGHSFKAK VAHPVHGRPFKPEVTVIIDGCTRFVVGFSVSLAESCVAVSDALRIGVKHFGLPIIYYSDN GGGQTGKSIDHEITGITSRLGIRHETGIAGNPQGRGIIERWWKDNLIEMARQYETFAGAG MDSSTKNLMYRKMESAFNALEKGKDLTEEQQKYLKKLPSWSRFIADVVKCIDEYNNRPHG ELPRHPDGGHYTPKAYREMRLEQDGIAPDMLSAEELATMFMPQEVRKVQRGWLDLFNNSY FSVELAEYHKDEVRVSYDLDDASVVNVFDMDGKFITKAQVNGNSREAFPTARIDQLAEKR RKGKIKRAENAIKLANAEVNPALEQAAAWDELGHFGGNVIKAEYAVLPKTGTDDEIVLFE ADM >gi|257257259|gb|ACDX02000002.1| GENE 86 93680 - 94597 642 305 aa, chain + ## HITS:1 COG:NMA1286 KEGG:ns NR:ns ## COG: NMA1286 COG2842 # Protein_GI_number: 15794215 # Func_class: R General function prediction only # Function: Uncharacterized ATPase, putative transposase # Organism: Neisseria meningitidis Z2491 # 5 305 4 304 304 498 89.0 1e-141 MTNTVNKALQQKLAEFKAKSGMNQTMLARGIGVSPASISMYLNDTYAAKGGKYETIEPKI EAFLEVQESKAQREELVLGFVSTKTTRRISEVMRDAHEAGDTVVIYGQAGLGKTQAVKNY CEKNPAAILIEANPSFTALVLMRKLAAAAKVSTVGSLNDLFESVSDRLRDSGRLIVVDEA ENLPLRALEIIRRLHDDTGCGLVLSGMPRLVANLRGKHGELVQLYSRVSVALNLGDSMPD DELEEIARAAMPEADDATIAELVKQSNGNTRRMSKLMRGAVRTANKNGIKMQSGIVKKYS SLIIR >gi|257257259|gb|ACDX02000002.1| GENE 87 94687 - 94950 153 87 aa, chain + ## HITS:1 COG:no KEGG:NMA1287 NR:ns ## KEGG: NMA1287 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_A # Pathway: not_defined # 1 87 1 88 88 113 73.0 2e-24 MKVLEKVDWKIFSSPRFWRWVPVGMTVGVWCFVGGMALYGCTQPEPVAKEPTKVEKMERQ ADLEVLKTERAYEAMSVEQKMEGIVYE >gi|257257259|gb|ACDX02000002.1| GENE 88 95077 - 95277 195 66 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261363952|ref|ZP_05976835.1| ## NR: gi|261363952|ref|ZP_05976835.1| transcriptional regulator, ArsR family [Neisseria mucosa ATCC 25996] transcriptional regulator, ArsR family [Neisseria mucosa ATCC 25996] # 1 66 1 66 66 102 100.0 7e-21 MMEIWMIWMILGAALGAVIGMFIYAEGILLENERLRGILRVEVAGREVLEAWMDAAYRSR KGGGEC >gi|257257259|gb|ACDX02000002.1| GENE 89 95400 - 95609 78 69 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261363953|ref|ZP_05976836.1| ## NR: gi|261363953|ref|ZP_05976836.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 69 44 112 112 105 100.0 1e-21 MEKEARANMERHREERGTKLEWGRPAVARTVWGDSWPAAPAIMENKHWTATDTRKADAEW ALKFRERVK >gi|257257259|gb|ACDX02000002.1| GENE 90 95606 - 95776 74 56 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261363954|ref|ZP_05976837.1| ## NR: gi|261363954|ref|ZP_05976837.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 56 1 56 56 67 100.0 3e-10 MSFKRRNSDWQAWGQHRRRATKFMVKRNREQAIAEYQAQFEDQDGKCRLKKEGNEK >gi|257257259|gb|ACDX02000002.1| GENE 91 95773 - 95943 133 56 aa, chain + ## HITS:1 COG:no KEGG:NMC1052 NR:ns ## KEGG: NMC1052 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 55 1 55 55 76 83.0 4e-13 MNEKELIEWLEDRGELMVMKKDGEGFVIAARAPDGIWKTAESSTLTMAIEAWEEIR >gi|257257259|gb|ACDX02000002.1| GENE 92 95940 - 96413 473 157 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261363956|ref|ZP_05976839.1| ## NR: gi|261363956|ref|ZP_05976839.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 157 1 157 157 288 100.0 7e-77 MNIARPNKEDLDAVWELVAFLNKIEQGLNPIYQPADPEDEDDFEYLSDAPADEVLEALES KSANAGLPWIMTVLDTLLSSNNDIVDQESSVLDFSPKFKQAVKDTERLDFLMEVGLAEFS KENGEKACCSLTEYGIRGYGSNYREALDDVMKEWKEM >gi|257257259|gb|ACDX02000002.1| GENE 93 96413 - 96610 188 65 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261363957|ref|ZP_05976840.1| ## NR: gi|261363957|ref|ZP_05976840.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 65 1 65 65 70 100.0 3e-11 MTTGMVIYLLICGLIGLALVVLALMSLIENWFKWRTKDVVLDACSMVWGLVVVLVAFLAI LGVVK >gi|257257259|gb|ACDX02000002.1| GENE 94 96621 - 97064 362 147 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261363958|ref|ZP_05976841.1| ## NR: gi|261363958|ref|ZP_05976841.1| hypothetical protein NEIMUCOT_03956 [Neisseria mucosa ATCC 25996] hypothetical protein NEIMUCOT_03956 [Neisseria mucosa ATCC 25996] # 1 147 1 147 147 287 100.0 2e-76 MNIEKFNPKKDPKYIGYIFRFLKKKSKLREALGAYPRIVKFKDGFGWYIGWFIEDGLGDF IGSRICYGSELMDETFCFLNTTETDVIAEVKWDEYERIGGCALTEWHHKWIYANKQTRKC RHCGRWERKVVKTVKTVERRTLWESES >gi|257257259|gb|ACDX02000002.1| GENE 95 97061 - 97888 501 275 aa, chain + ## HITS:1 COG:no KEGG:HD0107 NR:ns ## KEGG: HD0107 # Name: not_defined # Def: hypothetical protein # Organism: H.ducreyi # Pathway: not_defined # 1 158 1 152 156 130 42.0 5e-29 MNIKCPNCGAVHSLDSLINDADASAVLRAVLEMDAEMGKAAIRYVGLFRPAKSQLSWSRT AKLLNELLPMMKAQTAERDGVSSPAPAEAWLHGFNETVNARDQGRLKLPLKSHGYLLEIV SQWQGLGLPSPQPSPTGRGGEGGAPSKLRQGVAALGEWAGDDWAKREIASGFALLAALNL PNRPAAQDMPVVAEIWYRKLMETKEIVSPEYDPIRIQTGFKVLQAAETWPQPAELLRNLP PRLIPRAMLEKPAPDRAKGRQKMAEVIDVLNKKGN >gi|257257259|gb|ACDX02000002.1| GENE 96 97890 - 98291 345 133 aa, chain + ## HITS:1 COG:no KEGG:BF1067 NR:ns ## KEGG: BF1067 # Name: not_defined # Def: hypothetical protein # Organism: B.fragilis_NCTC9343 # Pathway: not_defined # 32 132 46 147 208 67 43.0 1e-10 MKVEVLKPVEIEVHTVKINVKLYDDVTENIPKFLLNKHGEFEIEIEVDTGKVVNWSGVES IQIFDKVCDCGTYTLFDKNGSIIIEVINDYVPNDLIPGSYGDYIDLQINMDGVVTNWPKK PDVSYFFKQDNEY >gi|257257259|gb|ACDX02000002.1| GENE 97 98302 - 98823 773 173 aa, chain + ## HITS:1 COG:NMA1291 KEGG:ns NR:ns ## COG: NMA1291 COG4396 # Protein_GI_number: 15794220 # Func_class: R General function prediction only # Function: Mu-like prophage host-nuclease inhibitor protein Gam # Organism: Neisseria meningitidis Z2491 # 1 172 1 172 172 239 80.0 2e-63 MAKQRIKQAAIEAAQDKTEVTAHIRTIGDLNREIKRLETEAGDKKAVIEQEYAALAAPLK AESERLTAAVAAYCEAHKDDLTENGKTKTVDFVTGLVKWRIRPPSVKVTGVAAVLAWMSE KTAYQSFIRTKQEIDKDAILNEREQFANGQVPGIKIVSGLEDFVIEPTEQELA >gi|257257259|gb|ACDX02000002.1| GENE 98 98909 - 99124 475 71 aa, chain - ## HITS:1 COG:no KEGG:NMA1292 NR:ns ## KEGG: NMA1292 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_A # Pathway: not_defined # 1 71 1 71 71 110 100.0 1e-23 MNTTYTLTFDQDSLKALNLLVFTLNHLKVLDMDMEGIEDGLSAVIETASEKADKLSAAFY NAVYEQEEKAA >gi|257257259|gb|ACDX02000002.1| GENE 99 99128 - 99304 234 58 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261366034|ref|ZP_05978917.1| ## NR: gi|261366034|ref|ZP_05978917.1| hypothetical protein NEIMUCOT_06654 [Neisseria mucosa ATCC 25996] hypothetical protein NEIMUCOT_06654 [Neisseria mucosa ATCC 25996] # 1 58 1 58 58 92 96.0 1e-17 MNTEFALNQLSNALNFIGTNLLDRKAMAREEMEQCGCLLLVLSEYANILDRKQKEEEV >gi|257257259|gb|ACDX02000002.1| GENE 100 99308 - 99898 828 196 aa, chain - ## HITS:1 COG:NMA1293 KEGG:ns NR:ns ## COG: NMA1293 COG3561 # Protein_GI_number: 15794222 # Func_class: K Transcription # Function: Phage anti-repressor protein # Organism: Neisseria meningitidis Z2491 # 1 196 7 202 202 324 85.0 8e-89 MNTQLIPTLVGTLDDQTQPLVDAHELHKFLGVETRFDIWMNRRIEEYEFKQALDFIEVFK NDHVERGFFGKREIQVKTYHLSLDMAKELCMVERNDKGRQARRYFIEMEKQAKALPDAVL YRIDALEDAYFQAAPEMLALLRYRSMGLNLTEIGKLLDMNPGAVSYRLKKLNDLGFLEYV PKPKMVAQQQSLGLEG >gi|257257259|gb|ACDX02000002.1| GENE 101 100095 - 100262 140 55 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261363965|ref|ZP_05976848.1| ## NR: gi|261363965|ref|ZP_05976848.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 55 1 55 55 68 100.0 1e-10 MVDEKLAEYRKRAAAKRTIKNVSFNNETEKDLLDYANKVDFSQWVKEKIREETQK >gi|257257259|gb|ACDX02000002.1| GENE 102 100345 - 100515 75 56 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|288575383|ref|ZP_06393681.1| ## NR: gi|288575383|ref|ZP_06393681.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 56 1 56 56 105 100.0 9e-22 MLDNYVYTYIIQCIGAVKPDTGKAPPERGCYGRKKMKSYLQILFFLFLILVSGKAY >gi|257257259|gb|ACDX02000002.1| GENE 103 100679 - 101083 373 134 aa, chain + ## HITS:1 COG:NMB0985 KEGG:ns NR:ns ## COG: NMB0985 COG4382 # Protein_GI_number: 15676876 # Func_class: S Function unknown # Function: Mu-like prophage protein gp16 # Organism: Neisseria meningitidis MC58 # 1 134 22 158 165 157 62.0 4e-39 MRRALIAKIKIAQKELGLDDGTYRAVLERVTGKRSCTECSIPELERVVEDLRQHGFTPKK TAGQRPNRRDSADPMMRKIEALLLDNGWTWNYAHGTAKKMFKVDRVEWLSDGNMHKLVAA LQISANRKKKEKTG >gi|257257259|gb|ACDX02000002.1| GENE 104 101080 - 101559 331 159 aa, chain + ## HITS:1 COG:no KEGG:NMCC_1014 NR:ns ## KEGG: NMCC_1014 # Name: not_defined # Def: integral membrane protein # Organism: N.meningitidis_053442 # Pathway: not_defined # 1 159 1 159 159 279 96.0 3e-74 MSLNWEMTEQDFEDVKHLLPHSVVAMITVIGLEAAFHMVKVWGGTNYPISNRRRNTRQSR ILHAQLVEDIGEEAAGRLERAYVGQPFLAIPRCWDAMRELRNRFIRRQYDAMSAEGLSDL FIVRELVLAHKLSTRNIRYILKEADREAAARAQADLFAA >gi|257257259|gb|ACDX02000002.1| GENE 105 101733 - 102239 359 168 aa, chain + ## HITS:1 COG:no KEGG:ACICU_02150 NR:ns ## KEGG: ACICU_02150 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 6 168 94 256 256 176 56.0 2e-43 MAQQKELPWIAEARKYIGLTEIPGKNHNPTILNWLHGLKAWWKDDETPWCGVFAAHCLRV GNRDIPKDWMRAKEYAFCGKRLTNPAYGCLVVFTRQGGGHVGFVVGKDKAGNLLVLGGNQ GNRVSIAAFPTSRVAAYVWPSVGGAPLDPAPERYNLPLGGAAMSRSEA >gi|257257259|gb|ACDX02000002.1| GENE 106 102236 - 102409 123 57 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261363969|ref|ZP_05976852.1| ## NR: gi|261363969|ref|ZP_05976852.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 43 1 43 57 66 100.0 7e-10 MKKSLIALALATLKPLVPEFEIKSARVGNLKQHPSLRLGKSGVAAAKRAARKRKNRR >gi|257257259|gb|ACDX02000002.1| GENE 107 102412 - 102576 90 54 aa, chain + ## HITS:1 COG:no KEGG:NMB0989 NR:ns ## KEGG: NMB0989 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis # Pathway: not_defined # 1 54 1 54 54 67 85.0 2e-10 MGQVAFYEKMIEQWSRQSREASEQADLAAFEFAESELANYREMLKRHLQNGSVK >gi|257257259|gb|ACDX02000002.1| GENE 108 102579 - 102821 144 80 aa, chain + ## HITS:1 COG:no KEGG:NMCC_0932 NR:ns ## KEGG: NMCC_0932 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_053442 # Pathway: not_defined # 1 80 1 78 78 143 93.0 2e-33 MRIFDIFKNPATGNVSHSKLWANVACAAGTVKFVMLPDPSAEIWAVYLGIVGGYAVARSF VSVKRQEVENESETRETVGE >gi|257257259|gb|ACDX02000002.1| GENE 109 102787 - 103212 469 141 aa, chain + ## HITS:1 COG:no KEGG:NMO_0891 NR:ns ## KEGG: NMO_0891 # Name: not_defined # Def: putative phage associated membrane protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 5 141 3 139 139 199 86.0 3e-50 MNPKLVKLLANNWQPIAIIALVGTGLAVSHHQGYKSAFAKQQVVIDKMEREKDQALRLSA QNYARELEQAREEAKQSEAKAHAVGVALAQKQAEVSRLKTENKKEIENALTQDRQKAGGG CIDGLGSHSLRLYARALGYGN >gi|257257259|gb|ACDX02000002.1| GENE 110 103109 - 103414 111 101 aa, chain + ## HITS:1 COG:no KEGG:NMB1087 NR:ns ## KEGG: NMB1087 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis # Pathway: not_defined # 1 101 1 101 101 137 89.0 1e-31 MRLLKTAKKQAAVVLTALALTACASTPAPSATEIKVVEKAIMPTPPAALMVAPVRPNPPK DGKTATLLEHAAEFGGYVSELENQNAAWRDWAGNRSRKVGD >gi|257257259|gb|ACDX02000002.1| GENE 111 103459 - 103629 248 56 aa, chain - ## HITS:1 COG:NMA1193 KEGG:ns NR:ns ## COG: NMA1193 COG3422 # Protein_GI_number: 15794137 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 1 56 1 56 56 99 92.0 1e-21 MYFEIYKDAKGEYRWHLKAANHEIIAQGQGYTSKQNCQHAVDLVKSTTAVTPVKEV >gi|257257259|gb|ACDX02000002.1| GENE 112 103642 - 103860 197 72 aa, chain + ## HITS:1 COG:no KEGG:NMC0974 NR:ns ## KEGG: NMC0974 # Name: not_defined # Def: putative phage related protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 72 1 72 72 117 88.0 2e-25 MNEYTFSYRFDGKSWSLSIWADSPEEAQAKFRAARENAQYDGEVVTKIYTFVNISWVKKL YRRIKYLMGIKE >gi|257257259|gb|ACDX02000002.1| GENE 113 103857 - 104195 161 112 aa, chain + ## HITS:1 COG:no KEGG:NMB1089 NR:ns ## KEGG: NMB1089 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis # Pathway: not_defined # 1 112 1 112 112 213 90.0 2e-54 MTYRELVERQLAVRHADLELGLSRAREQEPFVIHVSNLLDKAGFEYTVRMNKDFQTTFNL EYPNTNYDTFKRAVWQTISAYYCVCNDGDELEISSNRPDGYSVRIVFGDVPV >gi|257257259|gb|ACDX02000002.1| GENE 114 104207 - 104473 246 88 aa, chain + ## HITS:1 COG:no KEGG:NMO_0896 NR:ns ## KEGG: NMO_0896 # Name: not_defined # Def: putative phage associated hypothetical protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 1 88 1 88 88 145 93.0 7e-34 MDFEFGFKTLWPIATAAFWFWVNGISGRLKEADKRIEDLKEELHAVKLSYHTKQDAQADR KNIAASLERIENKLEKMNEKLDRKADKS >gi|257257259|gb|ACDX02000002.1| GENE 115 104470 - 104667 298 65 aa, chain + ## HITS:1 COG:no KEGG:NMA1311 NR:ns ## KEGG: NMA1311 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_A # Pathway: not_defined # 1 65 1 65 65 116 96.0 3e-25 MNDPILEALARIEAKQDDMLANQARMDEELQQIKKDCKKSAAVYGGLGGVIVTTGWELLR AKFGG >gi|257257259|gb|ACDX02000002.1| GENE 116 104669 - 105175 426 168 aa, chain + ## HITS:1 COG:no KEGG:NMA1312 NR:ns ## KEGG: NMA1312 # Name: not_defined # Def: putative DNA-binding protein # Organism: N.meningitidis_A # Pathway: not_defined # 1 168 1 168 168 289 95.0 3e-77 MAHPKETREKLRRLYVSDGQTLEIAAMMCEIPTATARSWKRAAKETGDDWDKVRAAYTLA GGGIEDLSRSLLAGFLVQYQSTMTMLQDTSIEELMPSERAKLLASLSDAFTKTVAANAKV MPETSKLATAIEVLELFGEVVKERYPQHLQAFVELVEPLGVEIEKKYR >gi|257257259|gb|ACDX02000002.1| GENE 117 105429 - 107039 1370 536 aa, chain + ## HITS:1 COG:no KEGG:NMA1313 NR:ns ## KEGG: NMA1313 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_A # Pathway: not_defined # 1 520 1 518 540 863 79.0 0 MKSKEFLKSLAEYAAQLRQIIEAEVDGFDASAAAIAERRAKVLDPVHGYEYFVNTYFPHY VRSSEKSELHEFLFSRLPEILQQPEGINEADAAPRGEAKSTLVTRLFSLWTVITGAKKFI VIAMDSIDQAYPMLEAIKAELEFNPRLKTDFPEMCGQGRVWQAGTIVTASNVKIQVFGSG KKMRGMVHGAFRPDLAILDDIENDEMVRNPDQRDKLEMWLKQTVLPLGAVGTKFDVIYIG TILHYDSVLSRTLNNPFWSTRKFKAMKRWPDRMDLWDRWEELYRNDGAEVAEAFYQAHKD EMERGAQTSWAARGVLALMKIRARDGHATFDSEYQNDPVSGEDAPFAENIKYWSELPDDL VYYGALDPSLGKAGAGRDPSAILVGGYQKSTGRLFVTVAQVKKRLPDLIIEDVIRIQKEA RVKPVLWVVETVQFQEFLKDELIKRGARSGVHIPVRGIKPSSDKMLRIETLQPHMANGLI LLNPDQKTLISQLRHFPKADHDDGPDALHMLWMAATTGNVSNRARAIDLPAPMLEI >gi|257257259|gb|ACDX02000002.1| GENE 118 107043 - 107240 276 65 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261363982|ref|ZP_05976865.1| ## NR: gi|261363982|ref|ZP_05976865.1| 30S ribosomal protein S3P [Neisseria mucosa ATCC 25996] 30S ribosomal protein S3P [Neisseria mucosa ATCC 25996] # 1 65 1 65 65 104 100.0 2e-21 MYEKERITAREKELTEDVEYLERDLDKAVKYLQDVVSTYKSGRLVSLHIMVARIEGFLAA CGEEY >gi|257257259|gb|ACDX02000002.1| GENE 119 107291 - 108736 1412 481 aa, chain + ## HITS:1 COG:no KEGG:DNO_0172 NR:ns ## KEGG: DNO_0172 # Name: not_defined # Def: hypothetical protein # Organism: D.nodosus # Pathway: not_defined # 33 388 29 376 532 113 25.0 2e-23 MFGLIKSATRKTAIKTLTSATEDALESLFSNMEGTDALLSRLGVDRQQALDAVVSDDEVA ACLEDLHAAMLNKPWRIYGEDLNDEDKDRLWKTLKRHLPALAEIVLTARLGGYGVGRYVY QPEPDGFLTIKHISNKSGELAKYIPYRDGLLVYRGTGGEDACNTDVLYLFIAHRATSTNP AGEMAAARLYAPVALRKKGFIYAAQFITRYAQPYLIAKIQANSEDDHNSFMSRFYRFVSG GALSIDREDDVMMLQNSADGQAFRRLENLANARIQKTLLGKVKTSDLETASRASQETEEN NRDERIGAYLALLSRAAQHFIDALVMVNNAYGKTINAPKGVWFEFEDEIKVDKTRAERDK MYMDTGQLVLTETYYRDILGFEPEHFELRDPKTSSENPVPAKFSLRLSDGLAHNAPDTAE QAIARPKMEAVLALLESCKDYAEFEAKLSELDLSKGDNLLIQRLVSDGLSAWADGAGDGR D >gi|257257259|gb|ACDX02000002.1| GENE 120 108723 - 110018 1183 431 aa, chain + ## HITS:1 COG:NMB1096_1 KEGG:ns NR:ns ## COG: NMB1096_1 COG2369 # Protein_GI_number: 15676977 # Func_class: S Function unknown # Function: Uncharacterized protein, homolog of phage Mu protein gp30 # Organism: Neisseria meningitidis MC58 # 14 206 15 208 210 125 37.0 2e-28 MDGIEYNFAGLVDKAAFAHFKAKKILPGFSHYDVWLYQHSLAFTVAKMMDVDMLAEVKDA IESAQQNGTAFADFKKRLKPYLMAKGWWGEQVMTDPLDGEPKLVQLGSTRRLKTIFNTNM QTAFAAGQWQRIQANKKALPYLRYNHSAAGHPRDSHKRYYGLVLPVDHDIWKVIFPPNGY GCKCSVSALTRRQAEREGISGEPDMDMVEFTNPRTGQTVLIPDDITPSFAHNHGDRLGAM DALFGEKNGEEALAAMIAEREAWLDKRYSVPSDKVAVLALPDKVSEKEVRRLTKEQSANN TKDHEARAAAAWQAETGDRLEVFDLPVEKGKAQADYLIVSDDLPREEWVTLDFMFTENPD RAELMNRYFAHTAGAWNTKVEKIQEHFDKADIVPLDLRHLNAANRHKLLQYVLSLPKEQR DKVRLLVKISE >gi|257257259|gb|ACDX02000002.1| GENE 121 110022 - 110321 307 99 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261363985|ref|ZP_05976868.1| ## NR: gi|261363985|ref|ZP_05976868.1| putative glycine cleavage system H protein [Neisseria mucosa ATCC 25996] putative glycine cleavage system H protein [Neisseria mucosa ATCC 25996] # 1 99 1 99 99 183 100.0 4e-45 MPSELYVSREVKVFLGGKTAPSELLDYLYPRLAEIDKEAAEQMQGEFSGCVFSIADLSAQ AFANVYGWILEAAEKSEWIKPYKADLKTALEADPRFKPV >gi|257257259|gb|ACDX02000002.1| GENE 122 110746 - 111702 1010 318 aa, chain + ## HITS:1 COG:no KEGG:Desal_2132 NR:ns ## KEGG: Desal_2132 # Name: not_defined # Def: hypothetical protein # Organism: D.salexigens # Pathway: not_defined # 7 178 3 182 700 86 30.0 2e-15 MAAMNTKTSPLNIKLSAALPVALATRADDVRTFKGVANSGKPFGYGGYQTVVDLAELSHK ASVPVLLEHSPLKMAGVCSLSVTAVGLIAEGSLLSNEFGTQIAEAADQGFPWEMSVYAQA ESYEELAAGAVLSVNGNEVTGPAVILRRCTIREVSFTAVGVDSETEAVVLSDGSPLPDIF KQPLELSMTPDEKKAFDDLKAEVDTLKAEKAEAEKKLKEAEAAAKKNQVKAKLSAAGFKE TEDGKFEGLSDATMTVLLSADIDAAEAMIADLTPKAAPSVVPPALLSEGAGKDDSENTGA EGKFSIASHKGLLGGSYV >gi|257257259|gb|ACDX02000002.1| GENE 123 111695 - 112024 520 109 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261363987|ref|ZP_05976870.1| ## NR: gi|261363987|ref|ZP_05976870.1| putative oxaloacetate decarboxylase alpha chain [Neisseria mucosa ATCC 25996] putative oxaloacetate decarboxylase alpha chain [Neisseria mucosa ATCC 25996] # 1 109 1 109 109 186 100.0 6e-46 MSKVKTEILGPVISDFLKYEATPQTRVAVAADTGTKAGKFVEYPLRGKKLLALTDEADGK VVVQPLNCIIDLSKVADADVKAATTGKTLDALKKEGDAYGIVYQGTPIA >gi|257257259|gb|ACDX02000002.1| GENE 124 112066 - 113055 1353 329 aa, chain + ## HITS:1 COG:no KEGG:PFL_1998 NR:ns ## KEGG: PFL_1998 # Name: not_defined # Def: hypothetical protein # Organism: P.fluorescens # Pathway: not_defined # 5 320 8 323 331 186 37.0 1e-45 MPLSDNSKFGVQALTTAINKIDPGASQIRELGVFEPEYLTTTYADIEFQDGKVHLVASKE RGTSGQAVESPKRTVRTVKIPHLPIHDVVRADDVQNLRAFGTTQAATVMDKVNEKLAGGK SDLEYTREHLMLGALQGKILDADGSVLLDVNTEFGVQRKTLNIELSKDTTKVGSVLDKLL SEQRQKFAGAQVRGWVVYCGAEFLSALKEHKSIFEVYKRFDEARAYREGDTLNPTEFVHK GIRFIEYANHFGSDADIGADKAILLPVGRNLYKEYFAPADMNATVNTRALPYYASREKLQ HDKGWSLHMQSNPLPIALRPELLATLTMS >gi|257257259|gb|ACDX02000002.1| GENE 125 113114 - 113524 490 136 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261363989|ref|ZP_05976872.1| ## NR: gi|261363989|ref|ZP_05976872.1| putative prophage protein gp36 [Neisseria mucosa ATCC 25996] putative prophage protein gp36 [Neisseria mucosa ATCC 25996] # 1 136 1 136 136 225 100.0 8e-58 MITIQDMMTRFGEQEMAERSNHENYETIDEAVMAAAIADAEEEAASYLRAAKLFFTDDTA PQVLKIKVCDIARYYLYNDAVTGIVEERYQSAVAWLKMVVKNPNMLDESRVSDDRRPSTC AVYVNAEPDLREWLKE >gi|257257259|gb|ACDX02000002.1| GENE 126 113528 - 113959 501 143 aa, chain + ## HITS:1 COG:no KEGG:SYN_02301 NR:ns ## KEGG: SYN_02301 # Name: not_defined # Def: mu-like prophage Flumu G protein # Organism: S.aciditrophicus # Pathway: not_defined # 3 142 4 149 149 63 35.0 2e-09 MRITVSHNLSRIAQSLSRLSGRLNGSLEEPLRAIGGMLERTTKDRIRETKTAPDGKRWAD VSPATAQAKNGRGGILVDHGNLFASITHEASAKSVITGSIMGYSVYVQEGTKNMPARPFL GLSSQDYQDIDELMSDWLEGLIV >gi|257257259|gb|ACDX02000002.1| GENE 127 113961 - 114425 473 154 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261363991|ref|ZP_05976874.1| ## NR: gi|261363991|ref|ZP_05976874.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 154 1 154 154 291 100.0 1e-77 MALKQHENLLAVYPEILGRLKTVKGIKAVKEIGELAELLAQGAAKRKAAPLDGAVYVVYG GSTFADEAKNGKYLKSTLHFTFVLARSYTANGKSTLYEVGETLTAIQRAFSGWDAGDEYA VTPFRRIASPSIEYNDGFAFYPISFACDTVQAAN >gi|257257259|gb|ACDX02000002.1| GENE 128 114438 - 115196 1002 252 aa, chain + ## HITS:1 COG:no KEGG:DNO_0752 NR:ns ## KEGG: DNO_0752 # Name: not_defined # Def: hypothetical protein # Organism: D.nodosus # Pathway: not_defined # 6 246 10 250 255 132 33.0 2e-29 MAKQNDHGLIFEGDVKVRNLNQKGSGFIDIGNTTALTTQTSVETKERVSKQKGTYGSALD SLKTVKPTEIGLKLDTFDKDNLALALMGEAAVIAATAQTVADETVTIGKKGMAYKLANGN IDPVTVKVKNKSKAAVDAAHIDINATLGMITILPAADTVNDGEDITVEYKTRASGGYKVS AATLSRLDLEIYVDGRNRVTGEAGVLHIPHAVLAADGSIDWFGDDFNEAEFKGTAVLASG ETSTYSFTSYNN >gi|257257259|gb|ACDX02000002.1| GENE 129 115344 - 115517 185 57 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261363993|ref|ZP_05976876.1| ## NR: gi|261363993|ref|ZP_05976876.1| CDP-diacylglycerol--serine O-phosphatidyltransferase [Neisseria mucosa ATCC 25996] CDP-diacylglycerol--serine O-phosphatidyltransferase [Neisseria mucosa ATCC 25996] # 1 57 1 57 57 64 100.0 3e-09 MKTLALTILFAVGAFFGFAALYLGFDMLAHIRDMKLLEFFAFMAVSGYLIKSALYRF >gi|257257259|gb|ACDX02000002.1| GENE 130 115514 - 115999 170 161 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261363994|ref|ZP_05976877.1| ## NR: gi|261363994|ref|ZP_05976877.1| hypothetical protein NEIMUCOT_03996 [Neisseria mucosa ATCC 25996] hypothetical protein NEIMUCOT_03996 [Neisseria mucosa ATCC 25996] # 1 161 1 161 161 311 100.0 9e-84 MKHLQPYYKQAIRQILSENRLSALFDVDQIYDALCTFPTPQAAADHICTLRNNENFTWKK LEKCQEIARKEGWRKFETPNPRNKYRILLQAASLRASNLRIAAEAKVKLTRNLSWETYVS QADLTDEKMLVLFSEHYKLPKLPPFFPCDLSILSTRMVRKS >gi|257257259|gb|ACDX02000002.1| GENE 131 116052 - 120107 4532 1351 aa, chain + ## HITS:1 COG:XF2482 KEGG:ns NR:ns ## COG: XF2482 COG5283 # Protein_GI_number: 15839072 # Func_class: S Function unknown # Function: Phage-related tail protein # Organism: Xylella fastidiosa 9a5c # 178 695 52 605 739 167 28.0 1e-40 MANIQAGLEIKAGVSGAENIDALAQSIEAAGIDTGKLTEEAKELGATLAKAQAQQAAIAE YKALSAELDNTAKEMRALDELTATLEKSMRGGGTQQQQADLAKLRTESERLAKSETELTG KLYAARDAMAVSGVSVKNLAAEEARLAAETATATAKLDKLSAEASELKAIADAKIKLGID TDEKALRELQELKKSYDLLKSSGTLTKEELSRATARYNDKVFQLNKSLSDLRPTLADFAN EFRGVASGAAGLTYAAREAVKFESAMAGVRKVVDGTPEQIEQLGGQVKKLAVEFGMMPEK MAEIVAAGGQLGIAADKLDEFARVTATMATAFGLTAEEAGNAAATIANVFQLPIGEVEKL GDAINVLGNNTAAREKDIVAAMARIGGTAKQFGLAADEAAALADAFIALGKPPEVAATAI NALLQKLQTAQSQGKGFQDALQSIGTSADEMAANIAANPQQALTEFLHKLEGLDKQSRAL TLSQLFGTEYSDDIALLVGSLGEYEKALGLVNDQAQIQGAMQKEAAAALNTTEGQINKAK AAVSNMAGELGDALLPILRITASTVETVATAISDFTKDFPVLSKLAVYFAAARVAMEAYS AVVRLGGVAALKSLVSQKAAVDALTVSYGKAGLAAKEYGSIASAGVAAQSKGLTGLASGL SSLVARWGIIGTTATIAGEAVGVFIQDLYEHIPGLRAVFDEMARPIAMIDSLLTTGSLDK YHEFFKTDAEIKRELEESNKKATEAAEKAAAAKKKAAEEEVAAVKALQAEYRASAAEQAA LERSMAALRADGRETGDFYSELAVKLETVRTKTTDLKAELDKKNIKISADTGELAEAQKA LESLGLTAEEVTTGLSKKASEGIANFSTAAAKFGNDAEQMSRVFQAALKQMDSPEAVEKL KAALEDAGKQAGMTAEEIKKIGDAAPVASDKVADAFAKIGVDSKAVMTGISSDARQAFAD FKDASEQAASAGQKDAKLMQAAFEQMMGKLKSKEEFAEFQHQLKASGDAALLTQEQLARL GDAASGGAEKAKAAYQGLNDTAAQAGEAAKNAHNKGAQAAESHAQSVSKVVKANDEAAAS AEKAAAATEKAAKAVTDYGYRLSQTGGYVKFNNEQLELMNQKFRGIKIGMEATLQIGRMK DYTQQIYLANSAMQRLSDATAQGALTQGVLNDAASAAAAAADKLGNTELTKFRNAIADAQ RRLNALRQEASDATRALEAELAELNGNAEAGYALQQEKKLRELNQKLANAKQLGQGDIAR EYQRQIELQQQIYDRQRNKRAESAAQDRARSQNTANGSNNVARQLQQIGNPQVNVNTDEL NRILAQRDEAIAGKAVSSLMTQLENSFKRTS >gi|257257259|gb|ACDX02000002.1| GENE 132 120208 - 120612 436 134 aa, chain + ## HITS:1 COG:no KEGG:DNO_0756 NR:ns ## KEGG: DNO_0756 # Name: not_defined # Def: hypothetical protein # Organism: D.nodosus # Pathway: not_defined # 4 133 5 133 134 147 59.0 1e-34 MADWILKRKDTGASVRLPQDMRWEDEFSWNKVAQAAPQRTLSGGLVIQQGIKANGRPITL SGDWVWLDLGSLRTLRDWTDVPELEMTLTHYDGREFNVVWRTHDAALGSVEPVRYSTPEA DSERYTAKLCLMTF >gi|257257259|gb|ACDX02000002.1| GENE 133 120659 - 122491 1457 610 aa, chain + ## HITS:1 COG:no KEGG:DNO_0757 NR:ns ## KEGG: DNO_0757 # Name: not_defined # Def: hypothetical protein # Organism: D.nodosus # Pathway: not_defined # 1 523 1 521 1209 331 40.0 7e-89 MEKTTRLTQQDLQIYPSQRMTDTPDGGGLMVGQPLTGEDNEIFPPVSDVDRTMGSLDARL LYPAVLRNDSEPLYGGHFVITEPPTSENVSFLAFKARNYGESRADIMPRIEAYSVPTVES RMTLMGRHLAGVRLVQAYQREEAPLPKVGERYCLQHEDKTNAKTERITEYFRIANLTHEM RTFEIPLPSGQTKEIRRRVVKMETTNPLTRDFDGVDYPVEGYAGNKVKILETQVADSASY YGVKPVSDDLKAGDASLTVASIYEKLVPTSTVETPYADQYPVAGDMWVAAAPEKRVFQGY VSGGTLTMPHSLLPGSIKIGNYKDNAQGQLVSGDDIIQADYEKGRLSGIPNGTYTISAIP AAKSSAARFAFAVEIKETNQGTAFAPLLTPAPAAGSLKVSFMALGVWYLLADSGDGVLRD EAGKAVGTVSSTTGSVVLNLPVLPDVGSRLVFQWGGISGFASSDGGKTGTAATPKPAESK CTYGLGHPIKPGTLVLTWQDGGTKTARDDGNGSLTGDMQGAVDYLNGVISTERYINSNTV DYTCEETRRISASVVGGAGYGMTAEDKGAHWELVFKDATPNQSVFRLDVKGQVSEETEYT VPNWYGAAVR >gi|257257259|gb|ACDX02000002.1| GENE 134 122501 - 124189 1463 562 aa, chain + ## HITS:1 COG:no KEGG:DNO_0757 NR:ns ## KEGG: DNO_0757 # Name: not_defined # Def: hypothetical protein # Organism: D.nodosus # Pathway: not_defined # 143 559 755 1206 1209 372 45.0 1e-101 MAISAGKEIKSGTARISLLAVKGGWKAGKNAVQGIRWDGGKLIVPKSALRVEALAWATKS YSTLGAAWRAQEKDATAKKTVDMSFSDWNAEFLSADSSHAKPRSGRLAGGLTFNVLIDFD QGSTCIFNSWSFSDGTTEIVEYGGTLYKNWDATKGSGENIGTLSATGEVSINDPAVKFQS LKVTGGVVRLPQVKIFSYAGRTPAAPVKPESFTVYANNGDIVGRSNAEGNIEGGITGKID YETGFYEITRTAGFYPEELRYNAVTQDNLPLDSSIIGIDAVRLPADGRVPVFRKGDMVVI SNRLKQDLGSAFTAAQKITLNRQNLDRLCLVDSKGKHVLAEKYTADLKAGSITFGEPLDL SQYTLPLTAVCAWEEENRITGVDISGRLKLQFAISRAYPKAGTYVSSALIGGDLLVRATE PFSQQAWDNVWADSRRGDPILAKANVKDYPIKLASNGAITERWLIRFTTANQFELYGEQL GLVAKSDTLTDLAPTNPATGKPYFTIKSTAFGGGWSTQNCIRFNTYGTPLPVWILRSVQP SPDRQAGRDGFTACLRGNTVAE >gi|257257259|gb|ACDX02000002.1| GENE 135 124255 - 124887 36 210 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|288575392|ref|ZP_05976880.2| ## NR: gi|288575392|ref|ZP_05976880.2| putative DnaJ domain protein [Neisseria mucosa ATCC 25996] putative DnaJ domain protein [Neisseria mucosa ATCC 25996] # 1 210 1 210 210 372 100.0 1e-101 MPFNLKSFIRNKYCEDVMENYYELLGIVSSATKDEIERALRRAAEQQTLDLDEIKKCREY LLNPVKKAEYDKELHAEYPDLAKEDRKKVKAEEKLRKKNKKGKGSDFLELIGMGIVVSIP FLWFTFNGGGGSSKPSGHQAQSACERAVTGILKSPSSADFGGWQRRENADGTYEISGYVD SQNSFGAMLRAQFSCSVDSSGDRAKITYFR >gi|257257259|gb|ACDX02000002.1| GENE 136 125924 - 126232 192 102 aa, chain + ## HITS:1 COG:no KEGG:RPSI07_0261 NR:ns ## KEGG: RPSI07_0261 # Name: not_defined # Def: hypothetical protein # Organism: R.solanacearum_PSI07 # Pathway: not_defined # 24 95 83 154 160 65 38.0 6e-10 MGLLNTDNLRFSDPIYGGRGYIAGEAEGIVSVGGQPAERKILLFERQSFKVIRSQWSKPD GTYRFDYLNPNKEFLMVALDHKKQYEPVSYDFIKPYVDTDGG >gi|257257259|gb|ACDX02000002.1| GENE 137 126244 - 128124 1162 626 aa, chain + ## HITS:1 COG:no KEGG:DNO_0760 NR:ns ## KEGG: DNO_0760 # Name: not_defined # Def: hypothetical protein # Organism: D.nodosus # Pathway: not_defined # 247 625 177 557 558 346 46.0 2e-93 MSDDKSKTYADSARIPLPFGALISERKPSNRLAIPFTRPLRHITAGDAVAPIEPPKPKPP EPYAPPAGYAAVSGEWGFVLHKAGTCSACLAGGFAGGSAAVGMSGVSVEAVDVAHCFQTT FGGMTALEGRLKSLSEPSFAVSACAAGVQSAMDGLDGCSGADTTGSLFLTGCGGDAQAAQ AGELLESHADSTFSDDALLVGCRQSDILEAADLVCCFSPKFLPAVTVPCEYYEIPVEPEP VPETYVCGIRPPSNRLALRFYRRKIAHDPRHIPLPFACFDTAKTPVLNGYIMKNTVKATA DGQPIELFSASFTADTGGYCWQGSLTVSPEDFAQINPDARAKGEEAQIKVQINADTFVII AEDYSDNRRFGQKSYTVTGRSVTTRLGADYAPKGSGTYRNPIYAQQIATEVLRPTGIGLD GWTMADWLIPADVYALTDKTPMAVLQELAQAAGGFIESDRAKPALRFRPKWKTAAWEVAQ AAADVTVPASVIFGISGQRSVSERANGIYVWPSHNKGKGADVYRNGSNREPRASALTHAL YTDQPVLLAAGVAALSATGVHKRETVSLPVSDKYAIPMANLGEIWQISEPSGNWQGVVVG VSVEVKIENDAPVVTQNVSIDRYLDE >gi|257257259|gb|ACDX02000002.1| GENE 138 128208 - 128438 338 76 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261364003|ref|ZP_05976886.1| ## NR: gi|261364003|ref|ZP_05976886.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 76 1 76 76 129 100.0 6e-29 MTNLYQNLTALLNREQRGIAKITGDLGGGSWAAQTQSGGNIVLSGQAALSQRVFYDVRTN RIISQAPDAAVLELGV >gi|257257259|gb|ACDX02000002.1| GENE 139 128510 - 128848 304 112 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261364004|ref|ZP_05976887.1| ## NR: gi|261364004|ref|ZP_05976887.1| conserved domain protein [Neisseria mucosa ATCC 25996] conserved domain protein [Neisseria mucosa ATCC 25996] # 1 112 1 112 112 205 100.0 7e-52 MSTDILRFKQGETVEISVIFDVLDDLGISALTGVTAAAELRRKYTKDTVARFQTTLYPEI RLVLLRLDADVCRSLMEGHYVFDLQFTRRSDGLVQYSGDIPLEILKSTSNVG >gi|257257259|gb|ACDX02000002.1| GENE 140 128838 - 129044 144 68 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261364005|ref|ZP_05976888.1| ## NR: gi|261364005|ref|ZP_05976888.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 68 1 68 68 133 100.0 4e-30 MLGKFRVFKGNLENAAHRYDDDLYRTWLIQPENQGKSFEDFTQWLADVKSEDAGEAPDFV ARFILAIS >gi|257257259|gb|ACDX02000002.1| GENE 141 129061 - 129567 578 168 aa, chain + ## HITS:1 COG:RSc0854 KEGG:ns NR:ns ## COG: RSc0854 COG5511 # Protein_GI_number: 17545573 # Func_class: R General function prediction only # Function: Bacteriophage capsid protein # Organism: Ralstonia solanacearum # 1 166 1 166 169 69 36.0 3e-12 MTLKQRINELADAIGAELKKVIVKIGSIDMLQTTERGSVVGAVNELKNLIDNIGSGNSGA AIDDTAPAADKSYSSQKVDSLINAAKTAVKSEILDGADAAYDTLAEVAKYIEQDKTGATA LSEAVAKRLRIDEAQVLTRAQKTAVETTLNLGDTDTDFVAKFNQALQS >gi|257257259|gb|ACDX02000002.1| GENE 142 129564 - 129929 275 121 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261364007|ref|ZP_05976890.1| ## NR: gi|261364007|ref|ZP_05976890.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 121 1 121 121 242 100.0 6e-63 MTLVERFKLFVDAVAAQFKAQEAEIIAIKTAANGGKKEYREVYVPRGSIKFHEGNSNNKW ITIPFDVPFSERPMVNVVLDIQDPTIRISYVGNITTEGFDIGINYAPSLNGLWYQAWIVD K >gi|257257259|gb|ACDX02000002.1| GENE 143 129885 - 130091 65 68 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|288575394|ref|ZP_06393689.1| ## NR: gi|288575394|ref|ZP_06393689.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 20 68 1 49 49 89 97.0 7e-17 MPKSRETKAALEVNAGAICLAGVAVLLHCYVAVPLYFFNLLIKGRLKIRRPFCCLFINNP SLIPQAIE >gi|257257259|gb|ACDX02000002.1| GENE 144 130313 - 131089 448 258 aa, chain + ## HITS:1 COG:XF0935 KEGG:ns NR:ns ## COG: XF0935 COG0338 # Protein_GI_number: 15837537 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Xylella fastidiosa 9a5c # 10 231 41 276 311 99 30.0 8e-21 MQKPQQSLPIIPWMGGKRRLAKHLLPMFPEHSCYVELFSGGAALFFLRETPAKVEVLNDI NGQLVNLYRVVHHHFDEFVRQFEWTLTSREVFARLQNTPPDCMTDIQRAARFFYLQHNAF GGKTVHQYFGTATTSKAWDASQVEAKLKAAKDRLKGVYIENESWERCFKRYDREHTFFYA DPPYWQTAGYDSAFDWSQYELLAKAMSESKGKVMLSINDHPDIRALFKDFRITQLELTYT VGRDKSGKTSGELVICNW >gi|257257259|gb|ACDX02000002.1| GENE 145 131217 - 131480 359 87 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261364010|ref|ZP_05976893.1| ## NR: gi|261364010|ref|ZP_05976893.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 87 1 87 87 161 100.0 1e-38 MNSYFLDALAPLVFRSGKPFGAQSDTDDIQFPLPSAAAGLVRTQIMRQNGCDWDGKAQGN RAKLSDVQVDELRQIAVQGAFLAKQDM >gi|257257259|gb|ACDX02000002.1| GENE 146 131477 - 133342 1243 621 aa, chain - ## HITS:1 COG:BH0328 KEGG:ns NR:ns ## COG: BH0328 COG1353 # Protein_GI_number: 15612891 # Func_class: R General function prediction only # Function: Predicted hydrolase of the HD superfamily (permuted catalytic motifs) # Organism: Bacillus halodurans # 5 566 10 544 604 204 32.0 6e-52 MTQYVLTLSIGPVQEFIASARRSRDLWSGSWLLSEMAKAAAKSLFEAGAQMVFPFVDEAT KDRLEPCDRMDDNFSVGNKIQVQVDAADDADVRYLVEQAKAAAQSRFETIARQARQALQK LQARQDLNAALRDEIWQMQLNDYLEIQAAWARITEKGYSDASQRAASGLAARKATRDFTS TGASNAWDERFMLPKSSLDGARETVLLEKANGDADLSDVVRRKLGLSRSEQLDCAGIVKR LGGNSEQFTPVTRVAADAWLQGLPENELSKLCDAYEPLIALNLATRVKGNQDIYADFPFD AQLLYRNRLDAALSDNKNNADASEKLSNLKNALKPIWHKYGEPCSYWAMLLADGDRMGEL LDRAKTIGEHQAITEALSTFAESVPAKMRDFRAQCVYAGGDDVLGFVALDKAVDCADALR QAFSDSLKKVSDVLKAEKAPTLSVGLAICHISTPLGNVRRLAKHAEKVAKGDNYPADQQR NGLGITLSVRSGSDSDWRVQWSDEAGLAAFEKWKKWYREKKISSRIAYDSRDIFMRTDFS PSNDLSSELHQNIRQAEFARMLDKARDMEGRKLDNEVQEALKRRLNARPDADALNVLATE LIIARWLAAKTQNDLGQEAQS >gi|257257259|gb|ACDX02000002.1| GENE 147 133458 - 134552 530 364 aa, chain - ## HITS:1 COG:BH0327 KEGG:ns NR:ns ## COG: BH0327 COG1367 # Protein_GI_number: 15612890 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) # Organism: Bacillus halodurans # 28 360 37 400 458 123 30.0 6e-28 MALLIPDFGPMEKLPEGKEAWQEIYCELVTPLHGGGVVARESDEKLPVRVTAIRGQLRFW WRLLAQQKWNLSGKSLREAEFRLWGGIGEEAAASLVFLRVQIQNKLQEASLSDYAGPLGY ALFTARAIQTGLPEMKLGKEGLQWIVQWRLSEKANETDKQQVLETVRWWVNFGGVGARTR RGCGAFVVKDSSNPVFKQPLSVDEVMQAGCKLVLRPSTNHALAAWKEAVQRLRDFRQGKE VGRNPSSDIKKPAGRSRWSEPDEIRRITRTHSDRHKPEHPAGDLFARGVFGMPIIFHFVG GDEPADTTLQPKCKERMASPLIIRPVWDGKGGFQAAALSLPLDKVLNVSVELLEKNKTRE LYTQ >gi|257257259|gb|ACDX02000002.1| GENE 148 135189 - 136088 1294 299 aa, chain + ## HITS:1 COG:NMB0851 KEGG:ns NR:ns ## COG: NMB0851 COG2974 # Protein_GI_number: 15676747 # Func_class: L Replication, recombination and repair # Function: DNA recombination-dependent growth factor C # Organism: Neisseria meningitidis MC58 # 1 299 1 299 299 561 96.0 1e-160 MWFKQISFYPLNKEKLPEADVLADKLAEAEFTRCQGLDWSSEGFAAPVPFSPELVFPADF TLRVALKKEEKVLPAGVIRDILEEKMAEIQNNEARNVGRKEKQELKEQITDDLLPRAFTR SSRTEAVFNTRHGYLLVNNAASAKAENILTKLREALGGLEASLPNTKQSPSSLMTEWLLQ GHCEGGFELDSDCELKGVGDVVPVVKVSKQDLTADEVVQHVKNGKTVTQLGLVWREQIAF ILTQDFTLKRIQYLDVLQEEAESNGDDAASLAFASQILMAESVSTMLEELVSYLGGWQD >gi|257257259|gb|ACDX02000002.1| GENE 149 136152 - 136568 727 138 aa, chain + ## HITS:1 COG:NMA1061 KEGG:ns NR:ns ## COG: NMA1061 COG4642 # Protein_GI_number: 15794010 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 138 1 138 138 243 84.0 7e-65 MFKHLALLPLAIMLALPASAAVLTSYQEPGCTYDGDVGKDGKPAGKGTWHCQDGRSYTGA FKNGKFDGQGVYTVSVNRETFIEPFNSNSTKFRNMVLSGTFKKGLAHGKFTASQNGETVF IMKCENGIIKEVKLPKTK >gi|257257259|gb|ACDX02000002.1| GENE 150 136640 - 137206 958 188 aa, chain + ## HITS:1 COG:NMA1060 KEGG:ns NR:ns ## COG: NMA1060 COG0717 # Protein_GI_number: 15794009 # Func_class: F Nucleotide transport and metabolism # Function: Deoxycytidine deaminase # Organism: Neisseria meningitidis Z2491 # 1 187 1 187 188 379 98.0 1e-105 MSIKSDKWIRRMSEEFGMIDPFEPNQIKEANGQRIISYGTSSYGYDIRCANEFKIFTNIN STIVDPKNFDPKNFVTVEDDCCIIPPNSFALARTVEYFRIPRNVLTVCLGKSTYARCGII VNVTPFEPEWEGYVTLEFSNTTPLPAKIYAGEGVAQVLFFESDEICETSYKDRNGKYMGQ TGVTLPKT >gi|257257259|gb|ACDX02000002.1| GENE 151 137360 - 137731 152 123 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0659_A6101 NR:ns ## KEGG: HMPREF0659_A6101 # Name: not_defined # Def: hypothetical protein # Organism: P.melaninogenica # Pathway: not_defined # 39 116 50 127 127 70 39.0 2e-11 MKKRDLIYTALPAFMLAACTSTGILYPKRQPHSSSSPLETIEATNTLIIFYDSEMGSERL MNAVREYGAKIVYEYRNFNGIAIKLPNGTDMEKAASHFRTVKGVLSAEADRRMQLHSEHN GLR >gi|257257259|gb|ACDX02000002.1| GENE 152 137907 - 138563 1124 218 aa, chain - ## HITS:1 COG:NMA1566 KEGG:ns NR:ns ## COG: NMA1566 COG2095 # Protein_GI_number: 15794459 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Multiple antibiotic transporter # Organism: Neisseria meningitidis Z2491 # 1 218 21 237 237 256 80.0 2e-68 MELGVEIGKLLVAFLVLINPFSALSIYLDLTQDHSTKEKRRIARTAALAVFIVITVFTLT GGMLLKILGISVGSFQVGGGILVLLIAISMMNGNDNPAKQNIGGDKEEGVVQHIQKNAKA IAVVPVAIPITIGPGGISTVIIYASAAKNYSDIALILAAGFLVSLICYAILVVAGRISKK LGTTGLTILNRIMGMMLAAVSVEIIVAGLKSIFPQLAG >gi|257257259|gb|ACDX02000002.1| GENE 153 138575 - 139738 1336 387 aa, chain - ## HITS:1 COG:HI0031 KEGG:ns NR:ns ## COG: HI0031 COG0772 # Protein_GI_number: 16272006 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Haemophilus influenzae # 1 369 1 366 371 339 50.0 4e-93 MNETVGMWAKIKRIVSAPIDPWLFFPMLAIYIMSLFLLYSADGQDFGQLEHKTMHTVTGF ALLWFVASFKPRDAAKVALPMYLIGVLLLVAVEVAGVTVNGSTRWLELGFTRIQPSEIMK IVLPMTVAWYFQRHEGRLKWFHYIIAMLLILIPVALILKQPDLGTAVLIMASGIFIVFFA GLPWKVIFAAIVAFVAALPLLWNYGMHDYQKTRVLTLFDPTQDPLGAGYHIIQSMIAIGS GGVWGKGWLNGTQTHLDYIPESTTDFIFAVYGEEFGLIGNILLLLVYLVILTRGLLIAAK AQSLYSRTLAGALTMTFFCYAFVNMGMVSGILPVVGVPLPLVSYGGTATLSIMIVLALLM GISSEHKTKHRYEFNDKADVNVSTKNK >gi|257257259|gb|ACDX02000002.1| GENE 154 139731 - 141770 2263 679 aa, chain - ## HITS:1 COG:RSc0062 KEGG:ns NR:ns ## COG: RSc0062 COG0768 # Protein_GI_number: 17544781 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Ralstonia solanacearum # 31 662 16 646 801 535 43.0 1e-151 MSILNILKRRLKNGGSGKTQTAKAAQTDSLLRLLVAFVLIVVLFAALLARFVYLQVFRHD DFSGQASSNRITLIPTPPVRGEIVDVNGVPLAKNYPVFSLEVIPSRIEGKMEDVIESLRK YVDITPTDLKRFYKYRESYRKFENIPLKLRLTDEEAAKLSVHLNEFKGVEVNSRTFREYP YGKLTSHFLGYIGRISDKDQEILEEEGLTALYRGSTHIGKSGLEKYYEPQLHGAPGYQEV EKDAYGNIVRVLKNVPSRMGQTLRLGMDIRMQQEADKILGDRRGAIVAINPQDGTVLAFV SKPSFDPNLFIDGIDSETWKALNDDWKKPLVNRVTQGLYPPGSTFKPFMGMALLESGKIT QTTVVPAPGAWSIPGSRHVFRDSVRSGHGSANLSKAIQVSSDTFFYRLGYEMGIDKASPY LAQFGFGKKTGIDLPSEYTGVLPSREWKAKRFAKSSDSTAKEWRAGEMVSVSIGQGYNAY TPLQMAHATASLANDGVVYQPHLVKELLDFDKRKITRINPNPEYKIPFKQDNFEYVKQAM EKVLKPGGTAHRIGGGLAYSMGGKTGTAQVVQIKQGGRYNASALREQHRDHAWFISFAPL EKPEIAIAVILENGGWGAYAAPLARSLTDFYMLNVKPQQFSDDPDAGGMPEPQQHRTQPQ PPTIFQKAYGLKQEEANHE >gi|257257259|gb|ACDX02000002.1| GENE 155 141781 - 142284 497 167 aa, chain - ## HITS:1 COG:RSc0061 KEGG:ns NR:ns ## COG: RSc0061 COG2891 # Protein_GI_number: 17544780 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell shape-determining protein # Organism: Ralstonia solanacearum # 1 157 1 155 170 92 37.0 5e-19 MNDFDDSYRAMPVGVIAASFAVTMLVDFMPFPFDGFFWLPELTALMLLYWSMHHPQRVGM GIAFLLGLIVDAATAATLGLHALSYTVMVYFVLNTRRQIMLYGHIMQIGAVLAALFCHQA VLVAARLFLNNQIITWQSFIAPLTGALLWPFLSQLMLMLTNFYRANR >gi|257257259|gb|ACDX02000002.1| GENE 156 142292 - 143131 896 279 aa, chain - ## HITS:1 COG:PA4480 KEGG:ns NR:ns ## COG: PA4480 COG1792 # Protein_GI_number: 15599676 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell shape-determining protein # Organism: Pseudomonas aeruginosa # 25 274 4 255 330 142 33.0 6e-34 MEHSSLRFDEAKGQKLLPRFIAYLLLGAGIMVADGRFDLMQPVRTVAAEILYPVQWLANQ PVRLYQYISNQSQSQTELLEQNRLLLEENGRLKIQLQRDKVNLSELQELKKLYGLQQNGI RNVIGAEVLSTGKDPLSERLIINKGSGEGVAAGDAVIDQNGLIGRITLVHANSAEVELMS AAQSIVPVAVERTGERNLSYGNGVGLDLRYFPTGSDLKPQDVLITSGLDGIYPAGIPVAR VDKVVRASGTPYYDTELTPFAALRRSRFVLVLSSSHSSQ >gi|257257259|gb|ACDX02000002.1| GENE 157 143143 - 144180 743 345 aa, chain - ## HITS:1 COG:RSc0059 KEGG:ns NR:ns ## COG: RSc0059 COG1077 # Protein_GI_number: 17544778 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Actin-like ATPase involved in cell morphogenesis # Organism: Ralstonia solanacearum # 1 341 1 344 347 375 60.0 1e-104 MFRFLSRFFSNDIAIDLGTANTLIYVRGKGIVLDEPSVVAVQSGTGGKSKIVAVGTEAKK MQGRAPRNIEIVRPMQDGVIADFTIAERMLSMLIKKATEGHSVVPPRVVICVPGGATQVE RKAILDSAFAAGASSVHLIEEPMAAALGAGLPVEDTVGSMVVDIGGGTTEIGILSLGGMA YSASVRAAGDEFDKSIVHYLRRHRGVLIGEATAEELKKTIGSAYGFATETAMRIKGRDLA EGTPKSLAVTSEEVREALSETVNQIIRAVRLALEQVSPELAGDIADRGIMLTGGGALLHG MDTVLADATGLPVGIADQPLNCVAYGAGKALDYIGKWNAVFVDNP >gi|257257259|gb|ACDX02000002.1| GENE 158 144414 - 144704 442 96 aa, chain + ## HITS:1 COG:NMA1567 KEGG:ns NR:ns ## COG: NMA1567 COG0721 # Protein_GI_number: 15794460 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit # Organism: Neisseria meningitidis Z2491 # 1 96 1 96 96 133 84.0 9e-32 MALSLTDVEKIAKLSRLSLTEEEKGKTLSELNDIFAMVEKMQSVNTDGIEPMAHPHEAAL RLREDKVTETDHAAEYQAVAPEVRNRLYIVPQVIEE >gi|257257259|gb|ACDX02000002.1| GENE 159 144941 - 146152 393 403 aa, chain + ## HITS:1 COG:no KEGG:Xaut_3733 NR:ns ## KEGG: Xaut_3733 # Name: not_defined # Def: hypothetical protein # Organism: X.autotrophicus # Pathway: not_defined # 17 399 18 403 404 171 28.0 6e-41 MELITTPKKLSDKFIKLTEKYTKIAFATAWASADHPAFNALLKHRNKIQHSTISLHFYQT DPKVLEEFKGHEDIGFIKQTNGVFHPKLYLFWNASNDWALLSGSANFTKGAFAGSNQEAM ILIQGESDDIFKDLICFLKDECFNKAEKISNDEIDRYRVLHQERKTQINTLSNHYTDTQK KNSGMNILSTKILTYSWDDYFKTIQQDENHQFEDRLALLDYSKQNFQDNSSFLTIDLEDR KLISGLPNIANSKTERLDYGWFGSTHSNGKFRSLINNGNQKVAEAIDKIPLTGKVSKEDF LAYYQLFQKIGYKNPIGVSTRLLAMKRPDLFFCFNGANQKGICEELGLSQHLDAERYWDE ILLRIYDTPWFNSSKPSEPTEQQAWSGRVALIDCIYYEPKNKK >gi|257257259|gb|ACDX02000002.1| GENE 160 146214 - 147671 432 485 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163737840|ref|ZP_02145257.1| 30S ribosomal protein S4 [Phaeobacter gallaeciensis BS107] # 8 471 11 452 468 171 32 3e-41 MVKYTLKQASQLLQSKQISAVELATEYLAAITAQNSVINGYITLDQDKTLAEARAADARI AQGNATALTGVPIAYKDIFCQTGWRSACSSKMLDNFVSPYTATVVQNLLDEGMVTLGRTN MDEFAMGSTNETSFYGATKNPWNPEHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPA SHCGITGIKPTYGTVSRFGMVAYASSFDQAGPMAQTAEDCAVLLNAMASFDERDSTSLER SKEDYTRDLDKPLKGMKIGLPKEYFGEGADADVQAALQNVINLLKAQGAETIEVSLPQTA LSIPAYYVLASAEASTNLSRYDGVRYGHRAAQFGDLEEMYSNTRAEGFGSEVKRRIMIGT YVLSHGYYDAYYLKAQKLRRLVANDFQTAFAQCDFILAPTAPTAAPKLGSDIHDPVQMYL SDIYTIAVNLAGLPALTLPAGFSSSGLPIGVQFIGNHFSEAKILGAAHQVQLASDWHTKN PNGKA >gi|257257259|gb|ACDX02000002.1| GENE 161 147668 - 148543 697 291 aa, chain + ## HITS:1 COG:NMB1357 KEGG:ns NR:ns ## COG: NMB1357 COG2990 # Protein_GI_number: 15677222 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 6 285 7 286 310 402 70.0 1e-112 MMPEQFVFPDFKTVYKNAPKFQIQHLKFTLRKLFARRQIKDFETFVNTSALRRVFFQKLP QDAYPLIHAFIDKRFDRQRRLQAMKEDLLAAEKLFGQETLTGMETREFHIVLAHLSDDLT LWLNRNDNCVDEGMWSLSLRDNEGKRLYMATFALVDGKLLAASIQGPAGEEAKDLVRSLT KQLHGLRPQQLMVTALQYFSASLKLSGVIGIAQEHQVKLRWRLKKRVKMNYDLFWQENGA TLESDGYWHLPQTPPRKDLAEIESKKRSMYRKRYQMLDNMAAEMQACFQKT >gi|257257259|gb|ACDX02000002.1| GENE 162 148645 - 150075 2019 476 aa, chain + ## HITS:1 COG:NMA1570 KEGG:ns NR:ns ## COG: NMA1570 COG0064 # Protein_GI_number: 15794463 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) # Organism: Neisseria meningitidis Z2491 # 1 476 1 476 476 866 97.0 0 MTWETVIGLEIHVQLNTQSKIFSGASTAFGAEPNAHASVVECALPGVLPVMNREVVEKAI KLGLALDAKINQKNVFDRKNYFYPDLPKGYQISQLDLPIVEHGKLEIVVGDDVKTINVTR AHMEEDAGKSVHEGLNGATGIDLNRAGTPLLEVVSEPEMRSAAEAVAYAKALHSLVTWLD ICDGNMAEGSFRVDANVSVRPKGQAEFGTRREIKNLNSFRFLEQAINYEVEAQIEILEDG GKVQQATMLFDPEKGETRVMRLKEDAHDYRYFPDPDLLPVIISDDRLQKAKEEMPELPKE MAVRFVADYGVSEYDARLLTASRVQAAYFEEAAKESGQGKLTANWMNGELAATLNKAGME LDDSPITAPRLAALVGKIADGTLSSKLAKKAFEAMWAEPEASIAEIIEKHGLQQMTDTGA IEAMVDEVLANNAKAVEQFKSGNEKALNAIVGQVMKASKGKANPAQVQELIKAKLA >gi|257257259|gb|ACDX02000002.1| GENE 163 150182 - 151189 1201 335 aa, chain + ## HITS:1 COG:NMA1571 KEGG:ns NR:ns ## COG: NMA1571 COG0543 # Protein_GI_number: 15794464 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases # Organism: Neisseria meningitidis Z2491 # 1 334 1 334 336 590 85.0 1e-168 MTHTITLPDQTTFTANDGETVLAAAARQNLNLPHSCKSGACGQCKAELVSGDIQMGEHSE QALSEAEKAQGKILMCCTTAQSDISINIPGYNANALPVRTLPARIESMVFKHDVALLKLA LPKAPPFAFYAGQYIDLLLPGNISRSYSIANSPDQEGILELHIRRRENGVCSEMIFGSEP KVKEKGIVRIKGPLGSFTLQEDSSKPIILLATGTGYAPIRSILLDLIRQDSSRAVHFYWG ARHQDDLYALEEAQELTGRLKNARFTPVLSKATESWQGEKGYVQTATAKDYPDLSGYEVY ACGSVAMTESAKSALTAQCSLPETAFYSDAFSPAQ >gi|257257259|gb|ACDX02000002.1| GENE 164 151436 - 153229 2540 597 aa, chain + ## HITS:1 COG:NMA1270 KEGG:ns NR:ns ## COG: NMA1270 COG0119 # Protein_GI_number: 15794202 # Func_class: E Amino acid transport and metabolism # Function: Isopropylmalate/homocitrate/citramalate synthases # Organism: Neisseria meningitidis Z2491 # 81 597 1 517 517 863 88.0 0 MQLDIDRLVAYFGGVNALAEALKQHDPENAATTAAIYKWRTRGSLPLAQLQKLTALAEAQ GRPLDLNAFLQKNESLERTEMTQTNRVIIFDTTMRDGEQSPGASMTKEEKIRIARQLEKM GVDVIEAGFAAASPGDFESVNAIAKIITKSTVCSLARAVENDVRKAGEAVSPAPKKRIHT FIATSPIHMEHKLKMKPQQVIDAAVKAVKIAKEYTDDVEFSAEDAVRSDLDFLAKIFTAV IEAGATTINIPDTVGYSIPSVWYERISNIIKSVPNGDKVVWSTHCHNDLGMAVANSLAAV QAGVRQVECTINGLGERAGNASLEEIVMALKVRHDLFGLETGIDTTQIVPVSKLVSTITG YPIQPNKAVVGANAFAHESGIHQDGVLKHPETYEIMTAESVGWSTNRLTLGKLSGRSAFR SKLADLGIELESEEALNAAFARFKELADKKREIFDEDLHALVSDEMGSMNAESYKFISQK ISTETGEEPRADIVFSIKGEEKRASATGSGPVDAIFKAIESVAQSGATLQIYSVNAVTQG TESQGETSVRLARGNRVVNGQGADTDVLVATSKAYLSALSKLEFGSAKPKAQGSGTI >gi|257257259|gb|ACDX02000002.1| GENE 165 153376 - 157344 4052 1322 aa, chain + ## HITS:1 COG:CAC2687 KEGG:ns NR:ns ## COG: CAC2687 COG0514 # Protein_GI_number: 15895945 # Func_class: L Replication, recombination and repair # Function: Superfamily II DNA helicase # Organism: Clostridium acetobutylicum # 282 666 9 367 714 259 38.0 3e-68 MTSPAPAVLIIDLEVNPKTDAVFKLGAYRPDLELGYERAVRSIKGFREALLEMEYLANGA HWLMGHNILAHDLRYLKEAAPDLPWLSLPVLDTLRLSPLAFPQNPYHRLIKNHKIISSSL NSPEADCRACWQLFQDQCAAFGNLKTRHPETYGVYSGLFGALPYQVADGIVIPGTQTQHN AYALIPHIWNMVQDEVETGRLKVCKTRFTRLMREDIHRPELYIPLAYALSWLSVSGGNSV LAPWVRHQFPDTARLIAELRDHDCGDAGCRYCCDTLNPVSQLKRYFGFASFREVDGVTGG QQAIVKAGMNGEHVLAVLPTGGGKSLCFQLPALNRYYRNGGLTVVVSPLQSLMKDQVDNL KAKGRTDVDTLNGMLSVTERADVLDRVTLGDVGILFVAPEQFRNTSFIKAIEHRQINGWV FDEAHCLSKWGHDFRPDYLYAAKFIAKRNHNGAAAAPVSCFTATAKPDVLQEITEHFREE LGIEFKQFIGGNERSNLFYEVLEVSDDLKNRYIDELLHRELDHQDGGAVVFVARQKSAEK YAEFLKRQGWDCEYFHAGLQANAKVEIQDDFIHDRLRVIVATNAFGMGVDKPNVRLVVHA EITGSLENYLQEAGRAGRDQKEAKCVLLFDRSDVDTQFRLSRFSQLEQRDLQSVWRKLKL LNRTVSGKAEDDAIVVTGGEILRDTEGYMSFDSDDRQADTKVKAALAWLERADLLERSEN QTRIFPSRSCRLNLDQAWGIIAKANLGQRKTDLYRTIAEIVFNADDDAPLSTDVLAQATA CSFAELRGHLKKLEELGVLVNDTKMTVNLRTDHSKPSEKRLELIIGHEEKLWQILNEKIP DADRGVWQNLSLTAVCREMHDIGCETVPADIKLLMQSLAYDKAAAETRSSGSFDIIDKGN DMLLLRFKDKQSTWAQLRENAALRRHICMSLLPLLISKTGGIRSKDAVVETSFGELKQHI GDDLALAAQIPESRREILLKQALLFMHKLGVIKLNHGMTILRHAMTIRLDHNALEQKRQY LKADYRPLEIFYGEKRFQIHVMQEYALCALKNLQNGWELVSDYFKTSEKDFKNKWFKGRL KELEESISPQTLHTITDGLNAIQKAVVTGKQENRLVLAGPGSGKTRVIVHRTAYLLKAEH VNPASVIILTFNCLAAQEIKRRLFELVGSLAAAVTVLTYDGMATRLLGVRFDGKKEYEEG QFKKWCREAAAMLSGGLSADADSDDARDRIMAGFRYILVDEYQDITEEHYELVSALAGRK REDEDEKLTIIAVGDDDQNIYAFNGTSNEYIHRFLQDYGVKHELPPKSWTHPPPNSQDAV FL >gi|257257259|gb|ACDX02000002.1| GENE 166 157454 - 158491 696 345 aa, chain + ## HITS:1 COG:RSc1436 KEGG:ns NR:ns ## COG: RSc1436 COG2801 # Protein_GI_number: 17546155 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Ralstonia solanacearum # 76 340 1 274 278 207 47.0 3e-53 MDTRLSRRRHRRTRTSPIQNHDRPPQKPLYRRQTRPRKNTGRAYRRVVLYARKGCLPKGV KSPQPKADRKGQSQTVQTLRAQHPLKYLLHIANLPKSSFYYHHQDRPDPDAADKALLVET YKRHKGRYGQRRIAAALDWNRKKAARLMKQLELKALIRAKKAYRHPAMGEISEHLLKRLF TAKKPNEKWLTDVTELKGKDGKLYLSPILDLFNREIVAYAMSRNANSDMVKEMLEKAAPR LTDKGTMLHSDQGVLYRTAEYRKLIAKHSMVQSMSRKANCWDNAPMESFFAVLKTECFYR AGELTVDELMKQIDDYMDYYNRERCSLKLKKLSPVAYRTQLAQSA >gi|257257259|gb|ACDX02000002.1| GENE 167 158909 - 159334 235 141 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261364033|ref|ZP_05976916.1| ## NR: gi|261364033|ref|ZP_05976916.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 141 1 141 141 244 100.0 2e-63 MKRILFTILFLSTTAYASHTYSSDNLTCTYQDLTVPNSRPQTTACSSLAWESAQVYDEKR GGYITGNGEEYKLKNGKTIVFSYEAFMKTKESNPTGGKWTHSTKLMNNKTYTTTERTFKG KSWTCYRSKKEELCVDSPRLY >gi|257257259|gb|ACDX02000002.1| GENE 168 159447 - 160916 911 489 aa, chain - ## HITS:1 COG:STM2238 KEGG:ns NR:ns ## COG: STM2238 COG4928 # Protein_GI_number: 16765566 # Func_class: R General function prediction only # Function: Predicted P-loop ATPase # Organism: Salmonella typhimurium LT2 # 6 379 2 342 443 251 37.0 3e-66 METQTLEKPTFGTQDEFNRKPIAENIIRLLTSPIDLSPMVIDGGWGTGKTEFCQKLIQLM QEQHRDYQPVYIDAFRSDHSGEPLLALLAEIIKACTPEDTDEQPSEQRKNITRKVAKAAG FVMKTVAKAAVGHVLKQNTDNLAEGLQQIMNDGQDADSLTETVTDAAATIVSHTIDATVE ALLKEQIEAEKNLKTLKAYLTELAAEKPIILFIDELDRCRPDYAVDMLEVIKHVFDVENV KVVLVMNTKQLRAAINHRYGVEVDAHKYLDKFLKYSFALPDKVVARFEEERALVAVEHFK QLIRKSRMASELQALIDERSPTIIGFISDMIERNNISLRETERLVRFLEIYHSLSGGGLN GVIWQYALLRITGVFIFCFYPSLMDDINKNRTDNKDFARLFNIQSLANIPENSSGVIHTN TNVIAMMLILHGAANIHFDVSTLHDRRSWQERINKDFLEHDEIYPRGMDGILTILKDTFR VLSLEQTSR >gi|257257259|gb|ACDX02000002.1| GENE 169 161056 - 162027 929 323 aa, chain - ## HITS:1 COG:NMA1185 KEGG:ns NR:ns ## COG: NMA1185 COG3547 # Protein_GI_number: 15794129 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Neisseria meningitidis Z2491 # 16 323 6 318 318 535 91.0 1e-152 MQGRFMMSTQYNYAGIDIAKRNFVIAVSSLSKTKTETNNPKGIAHTVEYLKKHNVALVVM ESTGGLEVPAAKAIHRAGIAVIIANPRQTHQFAQSQSLTKTDAKDAKMLAFFAQMMMQKE GWQTMLYQPPTEAEEVLEALVNRRNQLVDMRTAEKNRLHQVHETQVESVKQLIAHFDRLI DELDKQIDDHTHTHFDGKAKVAKQIKGIGSTTTATLMAMLPELGRLSHKRLASLVGIAPH PRESGETKFKSRCFGGRSAVRKALYMATVVATRFEPLIRDFYQRLLSKGKPYKVAVTACM RKLLTILNARMRDYFAENGIQTA >gi|257257259|gb|ACDX02000002.1| GENE 170 162392 - 164287 2798 631 aa, chain - ## HITS:1 COG:NMB0193 KEGG:ns NR:ns ## COG: NMB0193 COG0445 # Protein_GI_number: 15676120 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: NAD/FAD-utilizing enzyme apparently involved in cell division # Organism: Neisseria meningitidis MC58 # 1 631 1 631 631 1184 96.0 0 MTHMIYPKTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKG HLVRELDALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKAAIREMLENQEN LDLFQQSVDDVTLDGDRISGVITAMGVEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGD PAAKSLGGRLRELNLPQGRLKTGTPPRIDGRTIDFSQLTEQPGDTPVPVFSVRGNADMHP RQVSCWITHTNLKTHEIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFL EPEGLTTNEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASL ETKTIQGLFFAGQINGTTGYEEAAAQGLLAGANAVQYVREQDPLLLRREQAYLGVLVDDL ITKGVNEPYRMFTSRAEYRLQLREDNADMRLTEDGHKIGLVSEAQWRMFNEKREAIEREI QRLKTTWYTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGARSSENLSA EVIEQVEIQVKYQGYIDRQNEEIDSRRDIETLKLPDDIDYSKVKGLSAEVQQKLNQHKPE TVGQASRISGVTPAAVALLMVHLKRGFKGAK >gi|257257259|gb|ACDX02000002.1| GENE 171 164714 - 165433 1253 239 aa, chain - ## HITS:1 COG:NMA0326 KEGG:ns NR:ns ## COG: NMA0326 COG0528 # Protein_GI_number: 15793338 # Func_class: F Nucleotide transport and metabolism # Function: Uridylate kinase # Organism: Neisseria meningitidis Z2491 # 1 239 1 239 239 421 98.0 1e-118 MTQQIKYKRVLLKLSGESLMGSDPFGINHDTIVQTVGEIAEVVKMGVQVGIVVGGGNIFR GVSAQAGSMDRATADYMGMMATVMNALALKDAFETLGIKARVQSALSMQQIAETYARPKA IQYLEEGKVVIFAAGTGNPFFTTDTAAALRGAEMNCDVMLKATNVDGVYTADPKKDPSAT RYETITFDEALNKNLKVMDATAFALCRERKLNIVVFGIAKQGSLKRVVTGEDEGTLVHC >gi|257257259|gb|ACDX02000002.1| GENE 172 165744 - 166598 695 284 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts [Haemophilus influenzae R2866] # 1 279 1 276 283 272 53 1e-71 MAEITAKMVADLRAATGLGMMECKKALVEAEGNFEKAEEILRIKSGAKAGKLAGRTAAEG VLAYAINGNVGALVEVNCETDFVAKDAGFVEFANFVAKTAAEKKPATVEELSELVETERK AIIAKLGENMSVRRFQVIDTANQLVAYIHGALATEGVLVEFKGSEDVARKIGMHIVAAKP QCVTEAEVDAETIEKERHIYTEQAIASGKPADIAAKMVEGRIRKFLAEITLNGQAFVMNP DQTVAQFAKENGTEVVSFVRYKVGDGIEKAVVDYAAEVAAAAKV >gi|257257259|gb|ACDX02000002.1| GENE 173 166720 - 167448 1223 242 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225373956|ref|ZP_03751177.1| hypothetical protein NEISUBOT_02251 [Neisseria subflava NJ9703] # 1 242 1 242 242 475 99 1e-133 MSQITMRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQEAQEAVRRL VANKGTVLFVGTKRQAREIIREEATRAGMPFVDYRWLGGMLTNYKTVKQSIKRLEEKTAA LENAAEGGFNKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLG IPVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEGKNQALQETVAAAQEAA AE >gi|257257259|gb|ACDX02000002.1| GENE 174 167622 - 167864 385 80 aa, chain - ## HITS:1 COG:no KEGG:NLA_2240 NR:ns ## KEGG: NLA_2240 # Name: not_defined # Def: integral membrane protein # Organism: N.lactamica # Pathway: not_defined # 1 55 1 55 77 91 83.0 9e-18 MWHIILIGYLFVAVMYSAAQPSIARALIYLVFWAVLPVAFTVFVVTIRRRNRLMKQQEKE AFEQSRRAAGQEGGKHDGSA >gi|257257259|gb|ACDX02000002.1| GENE 175 167942 - 168532 622 196 aa, chain + ## HITS:1 COG:NMA0330 KEGG:ns NR:ns ## COG: NMA0330 COG0212 # Protein_GI_number: 15793342 # Func_class: H Coenzyme transport and metabolism # Function: 5-formyltetrahydrofolate cyclo-ligase # Organism: Neisseria meningitidis Z2491 # 1 193 1 193 193 310 87.0 8e-85 MRNEEKHALRRELRRARAQMGHQGRLAAGQTINRLLKRYIKKGRKVGVYWPMGNELRLDG FVRAAQKRGAKLYLPYIEPNSRRMWFTPYPSDGVKQERKRGRAKLNVPQFAGRKIRVHGL SILFVPIVGMDRKGYRLGQAGGYYDATLSAMKYRLQAKTIGVGFDCQLVDTLPREPHDLP LDGFVSESGVLVFKHH >gi|257257259|gb|ACDX02000002.1| GENE 176 168632 - 169219 242 195 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229209389|ref|ZP_04335820.1| acetyltransferase, ribosomal protein N-acetylase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] # 10 187 11 193 198 97 31 3e-19 MADFSSAPVLSFDRVRLEPLTTAHEDGLREAVCDGEVWKLNVTTAPEPEQVADYIRTAMQ TRLAFAVIDEDTGKIVGSTSLYHIDPAIPRLYIGFTWYALSARRTRINTACKIMLLDYTF DTLNCRCVCWQTDNLNTASQRAIERLGAHQDGVLRCHKLRKDGSVRDTVEYSLLREEWPQ ARAKLLEKAATYDAS >gi|257257259|gb|ACDX02000002.1| GENE 177 169610 - 171085 2131 491 aa, chain + ## HITS:1 COG:NMA0333 KEGG:ns NR:ns ## COG: NMA0333 COG0579 # Protein_GI_number: 15793344 # Func_class: R General function prediction only # Function: Predicted dehydrogenase # Organism: Neisseria meningitidis Z2491 # 1 488 1 488 488 924 90.0 0 MAEATDVVLVGGGIMSATLGVLLKELEPSWEITLIERLEDVALESSNAWNNAGTGHSALC ELNYAPLGADGTIDPTRALNIAEQFHISRQFWASLVEEGKIADNSFINTVPHMSLVMNTD HCNYLQKRFDAFKSQKLFERMEFSTDRAKIAEWAPLVINGRKEGQPVAANYSAEGTDVDF GSLTRQMVQYLREKGVKIEFNRHVEDVKRESDGAWVLKTSDTRNPDGQLTLRTRFLFLGA GGGALTLLQKSGIPEGKGYGGFPVSGLFFRNSKPETAAQHNAKVYGQASVGAPPMSVPHL DTRNVDGKRHLMFGPYAGFRSNFLKQGSLMDLPMSIHLDNLYPMLRAGWANMPLTKYLLG ELRKTKEERFASLQEYYPEANPDDWELITAGQRVQIIKKDPEKGGVLQFGTEIVAHADGS LAALLGASPGASTAVPLMIKLIHQCFPSRIPSWEGRLKELVPGFGIKLNDNPQLAEEIIS HNAKVLGIHHQ >gi|257257259|gb|ACDX02000002.1| GENE 178 171494 - 172498 1420 334 aa, chain - ## HITS:1 COG:NMA2208 KEGG:ns NR:ns ## COG: NMA2208 COG3178 # Protein_GI_number: 15795077 # Func_class: R General function prediction only # Function: Predicted phosphotransferase related to Ser/Thr protein kinases # Organism: Neisseria meningitidis Z2491 # 1 334 1 334 334 593 88.0 1e-169 MQRQTELQNWLHAVYPEQNFELSFAAADADFRRYFRATFADGKTVICMDAPPDKMSVAPY LKVQKLFNMLNVPQVLHVDEAQGFMVLNDLGSTTFLTAMQQEQGANAHKVLLLEAIDELV GLQKASRAGELPEYDRDIMLREINLFPEWFVAKELGRELNFKQRQLWQQTIDTLLPPLLA QPQVYVHRDFIVRNLMLTTGRPGVLDFQDALYGPISYDLVSLLRDAFIEWEEEFVLDLVI RYWEKARAAGLPVPAAFDEFYRWFEWMGVQRHLKVAGIFSRLYYRDGKDKYRPEIPRFLN YLRRTSRRYTELAPLYALLVELVGDDELETGFTF >gi|257257259|gb|ACDX02000002.1| GENE 179 172595 - 174976 2951 793 aa, chain + ## HITS:1 COG:NMA2207 KEGG:ns NR:ns ## COG: NMA2207 COG1452 # Protein_GI_number: 15795076 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Organic solvent tolerance protein OstA # Organism: Neisseria meningitidis Z2491 # 32 784 37 788 802 1002 62.0 0 MVLALSVGFGAGGAYAQNASLPQPADYEPVKTTPPAVQSVENHRPVDQDKLSLGDTCLFC QHQASEANKQPEIKRSGEEALPQDYTRVIADRVAGQSKVAVHAEGDVIIERNQEVLNADW ADYDQTSDTVRAGDRFKLHQDGSTVSGDTLVYNLKDNTGSSEYVRVDAEKDGRRLQSVSE KAEMKGKGLYKLINTKFNTCSPGDASWYIKAKSIETDQETGIGVAKDASLVFGGVPVLYT PWADFPLNGHRKSGLLVPTLATGSDGLELALPYYFNLAPNLDATFRPGIISSRGVQLGGQ VRYLEPKFNGVIDGDWMPHDKKRHENNRYQIKFDHNHQLTDKLSGGISFNQVSDDNYYRD FYGREDIASNVNLNRQLWLNYGDNIWGGSFDGALNVQKYQTLANQNGYKDEPYAIMPRLT GRWQKTMGKANINVFSQFTRFVHDSKQDGSRTVLYPSVRWDFNNQWGYIRPKIGVHATYY DLGSFGNQSGRRISRVLPIFNVDTGMTFERNANLFGNAYLQTLEPRLFYNYIPTKSQNDL PNFDTSENSFSYNQLFRENLYVGNDRINSANSLTAAAQTRFLDPNNGAELFRAGIGQKFY LKNDNVLLDGSVGRYERSQSDWVGFAHGKLSNSIHAGFDVHYNQNESRAESYAATVRYNP EPGKVLSARYKYGRNERIYLQSDGNYFYDKIRQVDLAAQWPIRKNLYAVARYNYEVQAKK PLEMLVGAEYKSNCGCWSASLIGQRYVTGENSRKNAVFFNLQLKDLSNLGNNPFEKLRLA IPGYSKTNEVVTP >gi|257257259|gb|ACDX02000002.1| GENE 180 174973 - 175959 1431 328 aa, chain + ## HITS:1 COG:NMB0281 KEGG:ns NR:ns ## COG: NMB0281 COG0760 # Protein_GI_number: 15676205 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Neisseria meningitidis MC58 # 47 328 67 348 348 363 72.0 1e-100 MNVKPLILAAALGLALNAHAAPKAKTVKKSVKPVAVQTTDTETRSDGVRLSDGIAAIADN EVITRRQLAQAVERARRTIPKGTQIGDNELREQVLAQLINQSLIVQAGKRKNIQADNAEI EAVIAANPSLKTPSASIRREIADSIIAEKVRQQAVMQHSRVSDAEVARAIEQAKQQGIAL PEGEPLRQYNAQHILIKADNENAAAGAESTIRKIYAQARSGADFAGLARQYSQDGSASSG GNLGWFADGMMVPPFEEAVHKLKPGQVSPPVRTQFGWHIIKLNDVRDAGTPEERQHNTIR QYLSRQKAEQAEINLLRELHEGAHIDIR >gi|257257259|gb|ACDX02000002.1| GENE 181 176389 - 176850 279 153 aa, chain - ## HITS:1 COG:SP0016 KEGG:ns NR:ns ## COG: SP0016 COG3335 # Protein_GI_number: 15899965 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 42 152 1 111 112 138 57.0 4e-33 MPKVYLDETGFDTFYYRPYAYALRGQIVKARISGKRYERMSLVAARGDRELVAPMIYKGT MDSSLFEAWFGQFLLKELKEPSVIIMDNARFHRMAVLREMAQRAGHIILPLPPYSPELNP IEKVWANIKRHLRKVMSGCLPFEQALLGIFCFV >gi|257257259|gb|ACDX02000002.1| GENE 182 176931 - 177239 243 102 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148984739|ref|ZP_01818007.1| IS630-Spn1, transposase Orf1 [Streptococcus pneumoniae SP3-BS71] # 1 96 1 96 116 98 42 2e-19 MAYSIDFRQKTLDHYEQHGNISQTARTFRITNRTLYQWIALKKETGSLQHRTKGGNSERI DKEELRRYVAEHPDAYQYEIAQHLGCTASNVGYLLKNTQDHA >gi|257257259|gb|ACDX02000002.1| GENE 183 177376 - 177615 219 79 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|288575414|ref|ZP_05976932.2| ## NR: gi|288575414|ref|ZP_05976932.2| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 79 1 79 79 152 100.0 8e-36 MENQVNRIRIPRESVILTVQTKRHPYRFPSGQADGSDNNFIQHSEVIMSVSVLFLEAIVA VGLASVAAIGILWAGGADW >gi|257257259|gb|ACDX02000002.1| GENE 184 177736 - 178362 290 208 aa, chain + ## HITS:1 COG:CC3019 KEGG:ns NR:ns ## COG: CC3019 COG0671 # Protein_GI_number: 16127249 # Func_class: I Lipid transport and metabolism # Function: Membrane-associated phospholipid phosphatase # Organism: Caulobacter vibrioides # 52 203 89 244 259 73 36.0 2e-13 MPDFFLFFRRFVQTAIVVFLPLSVYIAADLANGGSFAFERPLMFVIHEQTGQWFFPIALL LHYLGKTAVAVPLVCLAAVCLWRFGKLRAAVFVPLAALLPTLNMLWIKAWIQRPRPLLWS RAVEEANFSFPSGHSTFSAAVAVMLILLCYRTAYRRTAFAVGILFALLTGFSRVYLGVHY PTDVWAGWTNGTLTALLVYYVVFKKDFE >gi|257257259|gb|ACDX02000002.1| GENE 185 178362 - 179312 705 316 aa, chain + ## HITS:1 COG:NMB0276 KEGG:ns NR:ns ## COG: NMB0276 COG0429 # Protein_GI_number: 15676200 # Func_class: R General function prediction only # Function: Predicted hydrolase of the alpha/beta-hydrolase fold # Organism: Neisseria meningitidis MC58 # 6 315 6 313 318 465 73.0 1e-131 METLCPNTPLWLRNGHADTIFAKFIQRPAPAYRRELLPDSTGRTLVACDFVDAADPDAPL VVLFHGLEGSSRSHYAVELMRAVIEKGWNGVVVHFRSCGGVENTAPVFYHLGDTREISFM LEILSERYRRIYAAGVSLGGNALAKYLGEYGSLGMPAVPYAAAVVSAPVDAAAAGTRFDK GMSKLLYTRYFLKSLLPKAAATGFQTTLLKECKTLGDFDDRFTAPLHGFADRHDYYRRAS CKPWLKTVRTPLLLLNAVNDPFLPPKALPTVEEVSSAVTLLQPQYGGHAAFVSRDKGRLN LQWLPQTLLAYFEAFE >gi|257257259|gb|ACDX02000002.1| GENE 186 179387 - 180361 1506 324 aa, chain + ## HITS:1 COG:NMB2127 KEGG:ns NR:ns ## COG: NMB2127 COG0616 # Protein_GI_number: 15677940 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Periplasmic serine proteases (ClpP class) # Organism: Neisseria meningitidis MC58 # 1 320 5 324 328 426 65.0 1e-119 MQETNGYPDKRPDGPEGRWERDVLRDVLLAAYKEQRRARFWRNFWRIIGVLLIAALWFGS DDGTAGQGLAAGKEHTAVITLEGEIGGGIDDQVKMLRDSMEAAYSNPNAKGIVIRANSPG GSPVISNTAFNEIRRLKGEHKDIPVYVVAEDMCASGCYYIAAAADKIYADPSSIVGSIGV IGGGFDVTGLMDKLGIKRRLKTAGSNKGMGDPFTPETPEQAKIWEAMLSDTHQEFIKAVK LGRGEKLKDKEYPDVFSGRVYTGLEAKKVGLIDDFGSVYSIARDVVKAPELVSYTPEDDF GKFVRRHFGAQVKAEVEKTLSKMW >gi|257257259|gb|ACDX02000002.1| GENE 187 180554 - 180976 289 140 aa, chain + ## HITS:1 COG:SP0015 KEGG:ns NR:ns ## COG: SP0015 COG3335 # Protein_GI_number: 15899964 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 1 116 7 121 138 104 43.0 4e-23 MAYSIDFRQKALDHYEQHGNISQTARTFRITNRTLYQWIALKKETGSLQHRTKGGNSERI DKEELRRYVAEHPDAYQYEIAQHLGCTASNVGYLLKTLKITRKKKTTVYKEQDLQKSNRL PKTAGTIFRNAKGLLGRNGF >gi|257257259|gb|ACDX02000002.1| GENE 188 180942 - 181403 287 153 aa, chain + ## HITS:1 COG:SP0016 KEGG:ns NR:ns ## COG: SP0016 COG3335 # Protein_GI_number: 15899965 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 42 152 1 111 112 140 57.0 1e-33 MPKVYLDETGFDTFYYRPYAYALRGQIVKARISGKRYERMSLVAARGDRELVAPMIYKGT MDSSLFEAWFGQFLLKELKEPSVIIMDNARFHRMAVLREMAQRAGHIILPLPPYSPELNP IEKVWANIKRHLRKVMSGCLSFEQALLGIFCFV >gi|257257259|gb|ACDX02000002.1| GENE 189 181640 - 182257 896 205 aa, chain + ## HITS:1 COG:NMB1646 KEGG:ns NR:ns ## COG: NMB1646 COG1272 # Protein_GI_number: 15677495 # Func_class: R General function prediction only # Function: Predicted membrane protein, hemolysin III homolog # Organism: Neisseria meningitidis MC58 # 1 205 1 208 208 214 63.0 9e-56 MYHGERFNAYSHLAGSMLAVAALVLMTVKANDPYQLASALTYGICLILLYLGSTLYHSIP QPKIKAILQKVDHCMIYLLIAGSYTPFTLIPLKGSWGWSLFGVSWGLALFGIIQELTIGR KSEKRLLSMMIYVIMGWLILVAVSPLVRTLPFAGLFWLALGGILYSAGIYWFVNDAKIKH GHGIWHLFVLGGSIAQFLCIYFYVL >gi|257257259|gb|ACDX02000002.1| GENE 190 182376 - 183269 896 297 aa, chain + ## HITS:1 COG:NMA1785 KEGG:ns NR:ns ## COG: NMA1785 COG0697 # Protein_GI_number: 15794678 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Neisseria meningitidis Z2491 # 4 292 3 291 300 348 72.0 6e-96 MNQTATKDPLGSAWIIIATLGFTVMNLCIKAAAGKFGFSSGELVFWRMSFAAVMLAAIAK MRGDTFATRYWKIHLNRSVIGTAAMLCLFYAVTHLPLATGVTLSYTSSIFLAVFSFLILK ERIAFYTQAILVFGFIGVVLLLNPSFKGGQEIAALAGLAGGAMSGWAYLQVRELSLLGEP GWRVVFYLSVTGVVMSSIWATLTGWHSLSAEALPYLAGIGLSATIAQLCMTRAYKVGNKF TVASLSYLTVVFSALSGVMFLGDSVTWQETFGMIIIVASGVLSGIRPLAIKKWFSGH >gi|257257259|gb|ACDX02000002.1| GENE 191 183293 - 183652 570 119 aa, chain + ## HITS:1 COG:no KEGG:LHK_02230 NR:ns ## KEGG: LHK_02230 # Name: not_defined # Def: hypothetical protein # Organism: L.hongkongensis # Pathway: not_defined # 1 112 1 112 116 125 53.0 5e-28 MISIREQSYGLNVALYNEFTLDDFRQLESALLESKQKIHLPDILLDLSMLKDFTIDMAVE QIKFLNQHENDFGRVAVITNDIWIKLGARLSNLLINQHPKYFDDATKAQEWLLASNLKP >gi|257257259|gb|ACDX02000002.1| GENE 192 183730 - 183954 216 74 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225075511|ref|ZP_03718710.1| ## NR: gi|225075511|ref|ZP_03718710.1| hypothetical protein NEIFLAOT_00524 [Neisseria flavescens NRL30031/H210] hypothetical protein NEIFL0001_1398 [Neisseria flavescens SK114] putative phosphoenolpyruvate phosphomutase [Neisseria subflava NJ9703] hypothetical protein NEIFLAOT_00524 [Neisseria flavescens NRL30031/H210] hypothetical protein NEIFL0001_1398 [Neisseria flavescens SK114] putative phosphoenolpyruvate phosphomutase [Neisseria subflava NJ9703] # 6 71 3 68 71 94 80.0 3e-18 MAEDKQNAAYENALRQLDELIAHLRSSGEVSCAVAEQEDLMLIRLADLKIDLRPSDEKAI ADIDRFYRRHLGGK >gi|257257259|gb|ACDX02000002.1| GENE 193 184193 - 184396 312 67 aa, chain - ## HITS:1 COG:NMB0838 KEGG:ns NR:ns ## COG: NMB0838 COG1278 # Protein_GI_number: 15676734 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Neisseria meningitidis MC58 # 1 67 1 67 67 120 100.0 5e-28 MATGIVKWFNDAKGFGFITPDEGGEDLFAHFSAINMEGFKTLKEGQRVSFDVTTGPKGKQ AANIQAA >gi|257257259|gb|ACDX02000002.1| GENE 194 184673 - 184876 156 67 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149007011|ref|ZP_01830680.1| 50S ribosomal protein L7/L12 [Streptococcus pneumoniae SP18-BS74] # 1 64 19 82 87 64 53 1e-10 PEKKSKHHLLNKQDKEANRRLGKLRTVIEHINRKLKIFKILSLPYRNRRKRFGLRANLIA GLINAMG >gi|257257259|gb|ACDX02000002.1| GENE 195 184846 - 184992 73 48 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261365654|ref|ZP_05978537.1| ## NR: gi|261365654|ref|ZP_05978537.1| putative transposase [Neisseria mucosa ATCC 25996] putative transposase [Neisseria mucosa ATCC 25996] # 1 42 159 200 264 84 97.0 2e-15 MGAQHDMRLARRHLTELYPYKIVIADKGYQGLAKTGLQTPKRNPNIIC >gi|257257259|gb|ACDX02000002.1| GENE 196 184965 - 185465 322 166 aa, chain - ## HITS:1 COG:no KEGG:Aasi_1471 NR:ns ## KEGG: Aasi_1471 # Name: not_defined # Def: hypothetical protein # Organism: A.asiaticus # Pathway: not_defined # 1 134 13 152 157 99 46.0 4e-20 MKYENLIQRSDREFKRLTGVTPVLFHEMLQITTEAESRKVKSGRPHTLSLADQLLLTLSY LRHYHTQLELAAIYGLSESNVCRTIRKTEDALIRCKRFSLPKHKNPGDHTVIIDVTESPI ERPKNSGSITAARKSGTRLKSRSYTAEKLKKSSASGRGWVLSMICV >gi|257257259|gb|ACDX02000002.1| GENE 197 185719 - 186717 1475 332 aa, chain + ## HITS:1 COG:NMB0337 KEGG:ns NR:ns ## COG: NMB0337 COG0115 # Protein_GI_number: 15676252 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase # Organism: Neisseria meningitidis MC58 # 1 332 1 332 332 634 92.0 0 MSRPVPAVFGSVFHAQMPVIAYKDGKWQQTEWQTSSDLTLAPGAHALHYGSECFEGLKAF RQANGKIVLFRPTANIARMQQSADILHLPRPETEAYLNALVELVKRAAEEIPDAPAALYL RPTLIGTDPVIGKAGSPSETALLYILASPVGDYFKAGSPVKILVETEHIRCAPHMGRVKC GGNYASAMPWVLKAKAEHGANQVLFCPNGDVQETGASNFILIKGNEIITKPLTDEFLHGV TRDSVLTVAKDLGYTVSERNFTVDELKAAVEEGAEAILTGTAAVISPVTSFVINDKEIEV KSQERGYALRKALTDIQYGLAEDKHGWLVEVC >gi|257257259|gb|ACDX02000002.1| GENE 198 186986 - 187864 731 292 aa, chain + ## HITS:1 COG:no KEGG:CV_0489 NR:ns ## KEGG: CV_0489 # Name: not_defined # Def: hypothetical protein # Organism: C.violaceum # Pathway: not_defined # 34 275 36 272 293 174 48.0 3e-42 MEEPQIHLRRDKQIRPHDKRRHAPPFWQADRPYLHEHHISDARFRRLGYIMAMLAGAINA GGFFAFARYTSHVTGSMSLLADAVYLREWITAAVALISVLCFIVGAVHSGWVVLWTQQKR FRGSFGFSMWLEAVYLLIFGLFGLTTSQWNIGMGNMVFPSLALFLLCFIMGMHNTVMTLL SGGAIRSTHMTGTATDLGIELSRALYYSKKHHPRLPYVRVNKPKMWLLGGMMWSFLLGGV IGAWGYHQIGHHFALPVALVLFVLGAGSVGYDVRLRLKYMLIRYVRRRYGKE >gi|257257259|gb|ACDX02000002.1| GENE 199 188123 - 188803 189 226 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163756109|ref|ZP_02163225.1| 30S ribosomal protein S1 [Kordia algicida OT-1] # 109 210 243 344 347 77 36 5e-13 MKFLKPLTVAALAIPLALTGCVTDPVSGQRNTSKTAMYGLGGAAVCGIVGALTHGGRGAR NSALACGAIGAGVGGYMDYQEKKLRENLKNTNIEVERQGNQIKLVMPENVTFATGSAALS DHARNALATASETLVQYPDTTLTINGHTDNTGNDAINEPLSRNRALAVADYLQSRGVNGS RLTTAGYGSRHPIASNATVEGRAQNRRVEILINPDQNAIKAAQQQM >gi|257257259|gb|ACDX02000002.1| GENE 200 189119 - 189358 68 79 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|288575425|ref|ZP_06393707.1| ## NR: gi|288575425|ref|ZP_06393707.1| hypothetical DNA-binding protein [Neisseria mucosa ATCC 25996] hypothetical DNA-binding protein [Neisseria mucosa ATCC 25996] # 1 79 1 79 79 141 100.0 1e-32 MNINLAYKNNINYLANPNFSSKFRYIELQPYRQIRYSGFQQQILRFAADVPSLTPSEQKF TRTELSRAGKAAGESLYCL >gi|257257259|gb|ACDX02000002.1| GENE 201 189761 - 190630 1149 289 aa, chain - ## HITS:1 COG:NMB1418 KEGG:ns NR:ns ## COG: NMB1418 COG1560 # Protein_GI_number: 15677277 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lauroyl/myristoyl acyltransferase # Organism: Neisseria meningitidis MC58 # 1 289 1 289 289 466 77.0 1e-131 MKAAFFLLYLIQLLPFKVIHKIADAVGILAYYAVKPRRRVGETNLRKCFPEWSEDKRKAV LKRHFQHMAKLMLEYGLYWYAPADRLRKLVHYQDKHHLDNALAAGEKVILLYPHFTAFEM AVYTLNQDVPLTSMYSHQKNKALDEQILKGRHRYNNVFLIGRTEGLRAIIKQLRKSDAPF LYLPDQDFGRNDSIFVNFFGIPTATITGLSRIAGMTKAKVIPAIPTRNADNTVTLRFYPA WENFPSDDVVADTQRMNDFIEARARENPEQYFWLHKRFKTRPESEQGFY >gi|257257259|gb|ACDX02000002.1| GENE 202 190760 - 191308 802 182 aa, chain - ## HITS:1 COG:NMA1631 KEGG:ns NR:ns ## COG: NMA1631 COG0817 # Protein_GI_number: 15794525 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, endonuclease subunit # Organism: Neisseria meningitidis Z2491 # 5 181 4 180 180 291 89.0 4e-79 MTSASQTTRILGIDPGSRVTGFGVIDVRGREHFYIASGCIKTPPDAPLSERIAVIVRHID EIVRTYRPQQAAVEQVFVNVNPASTLMLGQARGAALAALVMHGLPVSEYTALQVKQAVVG KGKAAKEQVQHMVVQMLSLSGTPQSDAADGLAVALTHALRNHGLAAQLNPNGMKVKRGRF QW >gi|257257259|gb|ACDX02000002.1| GENE 203 191501 - 191836 186 111 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|288575427|ref|ZP_05976951.2| ## NR: gi|288575427|ref|ZP_05976951.2| major outer membrane protein IB [Neisseria mucosa ATCC 25996] major outer membrane protein IB [Neisseria mucosa ATCC 25996] # 1 111 46 156 156 197 100.0 2e-49 MKPLYILAAALTALPVLATAEVRLYGEIKSGVEASRIKSGGSSVSHSGVYDSGSYVGLRG SLPIVGGNNVLFQAEQDTPVGLRSLSRTVWHSPSPHAGNMGDDGAGQFGKY >gi|257257259|gb|ACDX02000002.1| GENE 204 192060 - 193091 543 343 aa, chain + ## HITS:1 COG:RSc1436 KEGG:ns NR:ns ## COG: RSc1436 COG2801 # Protein_GI_number: 17546155 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Ralstonia solanacearum # 76 319 1 253 278 195 48.0 1e-49 MDTRLSRRRHRRTRTSPIQNHAPIPQKPLHRRQTRPRKNTGRAYRRVVLYARKGCLPKGV KSPQPKADRKGQSQTVQTLRAQHPLKYLLHIANLPKSSFYYHHQDRPDPDAADKALIAEI YERHKGRYGQRRIAAALDWNRKKVARLMKQMELKALIRAKKAYRHPAMGEISEHLLKRRF EARKPNEKWLTDVTELKGKDGKLYLSPILDLFNREIVAYAMSRRADSEMVKEMLEKAAPR LTDKGTMLHSDQGVLYRTAGYRELLAEHSMVQSMSRKANCWDNAPMESFFAVLKTECFYN AGELTVDELMKQIDDYMDYCIGFQTTFLSLSIFCHYLGSRQKL >gi|257257259|gb|ACDX02000002.1| GENE 205 193050 - 194024 736 324 aa, chain - ## HITS:1 COG:YPO0187 KEGG:ns NR:ns ## COG: YPO0187 COG0463 # Protein_GI_number: 16120528 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Yersinia pestis # 2 265 3 274 329 90 28.0 3e-18 MSITVSLIVPVYNGGKFAAGLCRHFAGLHKAVEGIEFIVVNDGSTDDTSAQFRQFFNEHP ELQAQLIDTPNGGVSRARNIGLSKVRGEYVMFMDHDDNIDPPLLTGLVEKIKRSDADMLQ FNVDARYPANEDEVIGLADYMDRYPFWSCVWSYIYKRSLLEKAGVKFIEGMKYLEDGVFL TEYFLQCQTVIASNTVVYDYVDNPESAMRSKRTPEQTKKYLDDIGLAVREYTRLLATPGQ PPKVVRRLLEIRDSFQFIHLVSMLKSGVSTDELFRRLEENGYDFRMAGYPSKFNRRRDVR LLCHVFRSRLLLKLLAASKIMAKD >gi|257257259|gb|ACDX02000002.1| GENE 206 194202 - 195743 1009 513 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145628098|ref|ZP_01783899.1| 30S ribosomal protein S20 [Haemophilus influenzae 22.1-21] # 3 503 5 516 524 393 41 1e-108 MNLLGALAKVGSLTMVSRILGFVRDTVIARAFGAGMATDAFFVAFKLPNLLRRVFAEGAF AQAFVPILAEYKETRSKEATEAFIRHVAGMLSFVLVIVTALGILAAPWVIWISAPGFAKE ADKFQLSIDLLKITFPYILLISLSSFVGSILNSYHKFSIPAFTPTFLNISFIVFALFFVP YFDPPVTALAWAVFVGGILQLGFQLPWLAKLGFLKLPKLNFKDAAVNRVMKQMAPAILGV SVAQISLVINTIFASYLQSGSVSWMYYADRLMELPSGVLGAALGTILLPTLSKHAANQNT EQFSGLLDWGLRLCMLLTLPAAVGLAVLSFPLVATLFMYREFTLFDAQMTQHALIAYSFG LIGLIMIKVLAPGFYARQNIKTPVKIAIFTLICTQFMNLAFIGPLKHVGLSLAIGLGACI NAGLLFFLLRKHGIYRPGKGWGSFLGKMLLSLAVMGGGLWAAQAYLPFEWVHVGGLRKAG QLCILIAIGGGLYFVSLAALGFRPRDFKRVETH >gi|257257259|gb|ACDX02000002.1| GENE 207 195954 - 196652 926 232 aa, chain + ## HITS:1 COG:NMB0278 KEGG:ns NR:ns ## COG: NMB0278 COG0526 # Protein_GI_number: 15676202 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Neisseria meningitidis MC58 # 1 232 1 232 232 329 82.0 3e-90 MKLKALALTAALLALVACDNKAQTSVPADSAPAASAASAAPVALVEGLNYTTLSTPIPQQ QAGKVEVLEFFGYFCPHCAHLEPVLSKHAKTFKDDTYLRTEHVVWGDEMKPLARLAAAVN MAVADTKDIANSHIFDAMVNQQIKLQDPEVLKKWLNEQTAFDGKKVLAAYESPESQTRAD KMAELTNMYKIDGTPTVIVGGKYKVEFADWESGMKTIDLLADRVREEQKTAK >gi|257257259|gb|ACDX02000002.1| GENE 208 196847 - 198001 880 384 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915191|ref|ZP_01903719.1| 50S ribosomal protein L27 [Roseobacter sp. AzwK-3b] # 1 362 1 344 345 343 50 3e-93 MKFIDEAKIEVAAGKGGNGATSFRREKFVPRGGPDGGDGGKGGSVWAEADENTNTLVEYR FVKRYQAKNGEKGHGSDRYGAGADDIVLKMPVGTLIRDLDTDEIVADLTYHGQRVCLAKG GKGGLGNIHFKSSVNRAPKQSTPGEEGETRSLQLELKVLADVGLLGMPNAGKSTLITAVS AARPKIANYPFTTLHPNLGVVRIDENHSFVMADIPGLIEGAAEGAGLGHRFLKHLSRTGL LLHVVDLAPFDETVNPAEEALAIINELRKYDEELYGKPRWLVLNKLDMIDEEEAQARTAA FLEAIGWDYPKPDDRFQFDMETPRLFQISALTHQGTQELVHQINQYLTEKKRIEAEKAEA EQAAANVEIAEQQSKTDTGVFKPE >gi|257257259|gb|ACDX02000002.1| GENE 209 198081 - 198269 158 62 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261364075|ref|ZP_05976958.1| ## NR: gi|261364075|ref|ZP_05976958.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 62 1 62 62 112 100.0 1e-23 MISDKQRVELAKKQAMLKILYQAWLAEKRKYAVITAVDNEGNLIEYHPSGNQRTVGHVKQ PA >gi|257257259|gb|ACDX02000002.1| GENE 210 198250 - 198864 482 204 aa, chain + ## HITS:1 COG:HI1395 KEGG:ns NR:ns ## COG: HI1395 COG4185 # Protein_GI_number: 16273305 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Haemophilus influenzae # 7 135 12 140 140 161 59.0 7e-40 MSNNRPKAIFYCGANGSGKSTLRQFNQDRVSLVIDSDHIAAEINPEMPRLADMEAGKTAL RLFRQALDNRISFSMESTLSGKSALTRIQTASNAGFYVILNYIGLATPELNIRRMQERVA SGGHWIDPELILKRYHVSLQNLHTALPFADESFIFDNSSIYPQLQIWMNQYQYLKNKHLA DWVKPIEQTILSNGLIFDSFLAYE >gi|257257259|gb|ACDX02000002.1| GENE 211 198932 - 200353 1750 473 aa, chain + ## HITS:1 COG:NMA0347 KEGG:ns NR:ns ## COG: NMA0347 COG0215 # Protein_GI_number: 15793358 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Cysteinyl-tRNA synthetase # Organism: Neisseria meningitidis Z2491 # 1 473 227 699 699 976 97.0 0 MTTIYNTLTRQKEPFTPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYP LTYVRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQ MIAMIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPLD FVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIA QSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQY DPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFDLSENANDYTRRF YAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKVLGGIIGLLQRDPTEFLQGGAVS DGLSNEEIDDLIAQRKQARADKNWAESDRIRNLLNEHKIILEDNADGTTWRRG >gi|257257259|gb|ACDX02000002.1| GENE 212 200439 - 200954 403 171 aa, chain - ## HITS:1 COG:NMA0494 KEGG:ns NR:ns ## COG: NMA0494 COG0110 # Protein_GI_number: 15793493 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Neisseria meningitidis Z2491 # 1 170 2 169 170 226 65.0 2e-59 MKAKVNGLILRVVSGLLPPSYCRVLGTPAKRVRVFLAKRVSPHIGTNVNIEKGAYVMPDT VIGDNSGVGVNCEICYGLTIGNNVMMGPECLFYSYNHKFNRETLKYEGYTEVNPIVIEDD VWIGRRAIIMGGVRVGKGAVIGAGAVVTKDVPPYCVAAGNPAVIKKNLLED >gi|257257259|gb|ACDX02000002.1| GENE 213 201238 - 201453 387 71 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|240079841|ref|ZP_04724384.1| 50S ribosomal protein L31 [Neisseria gonorrhoeae FA19] # 1 71 1 71 71 153 95 5e-36 MKQGIHPNYHEINVTCSCGNKFVTKSALEKDNFNIEVCSLCHPFYTGTQKIVDTTGRVDK FNNKFGNLFKR >gi|257257259|gb|ACDX02000002.1| GENE 214 201623 - 203275 2173 550 aa, chain + ## HITS:1 COG:NMA0497 KEGG:ns NR:ns ## COG: NMA0497 COG1807 # Protein_GI_number: 15793496 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family # Organism: Neisseria meningitidis Z2491 # 1 548 1 548 558 748 72.0 0 MLTYTPPDPRQPAKTHEKPWLLLLMAFAWLWPGVFSHDLWNPAEPAVFTAVEALDAGATP LVAHVLGQPDFQIPPVYLWVAAAFKHLLSPWAADSYDAARFAGVFFTIIGLTACGFAGFN FLGRHHGRSVVLILIGSIGLLSVAHFLNPASVAFAASGMILCGFSLAKRRVITASLLLGC GWALLSLSSGYLMTAALMFLAPTLLLDPQWRVKRYYLTLVGAFAIGLPLLTVYPLIFSRT QPELFSFWLHHYSLGAFGGLGDFQTTFSLFYYLKNLLWFTLPAWPLTAWTLSRPRIREKN WSVLCISWFFIVISILAVSPQRLQDNLVWLLPPLALLGAAQLDGLRRGAAAFINWFGIMA FGLFAIFLWTGFFAMNYGWPAKLAERAAYFSPYYTPDIDPIPMAVALLFTPLWLWAITRK NIRGRQAVTNWAAGVTLAWALLMTLFLPWLDAAKSHAPVVLQMEAALSPELKQRLSDDLE CISIAAEDRRARIVWAQYSDLKPHIDDAACRYRLVQQPKNTDAPQGWTKIWQGARPRNKV EGFALLEKAE >gi|257257259|gb|ACDX02000002.1| GENE 215 203616 - 204104 641 162 aa, chain - ## HITS:1 COG:NMA0493 KEGG:ns NR:ns ## COG: NMA0493 COG0526 # Protein_GI_number: 15793492 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Neisseria meningitidis Z2491 # 1 162 1 162 162 246 74.0 1e-65 MKKLITIAAVAIIGALLAIVLIPDNKPTPTFSLFDLQGKPVSNANLQGKVSFINFWFPSC PGCVSEMPKVIKMSKDYQGKDFQVLGIAQPIDPLESVTQYVQEYGLPFTVMFDADKAAAQ AFGTQVYPTSFLINKKGEILKTFVGEPNFAELYQEIDKELAK >gi|257257259|gb|ACDX02000002.1| GENE 216 204101 - 204487 380 128 aa, chain - ## HITS:1 COG:NMA0492 KEGG:ns NR:ns ## COG: NMA0492 COG0824 # Protein_GI_number: 15793491 # Func_class: R General function prediction only # Function: Predicted thioesterase # Organism: Neisseria meningitidis Z2491 # 1 127 1 127 127 157 60.0 6e-39 MNVRVRNYHLDGYGHVNNARYLEFLEEARWVFFEEHGFLSEIDGLMLVVVRIDIRYRRAA VDGDILRFEGRLKELTSRHIILTQNIVLPSGKNAVEAESTLMVVSAESGRSISIPEPLFT LLKQYAEA >gi|257257259|gb|ACDX02000002.1| GENE 217 204487 - 204852 645 121 aa, chain - ## HITS:1 COG:no KEGG:NGK_2595 NR:ns ## KEGG: NGK_2595 # Name: not_defined # Def: VacJ-related protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 1 121 318 437 437 241 95.0 8e-63 MYEVNRSVFLLIPLDPFWNWLQTLPGNHLDGLTLEDIQADANSYLVRPCETADEVWDEIE ARFEDIFAAELADWCEDESEWPDLDADIFNEWFDIQLSTVITDLEHEPLAREAFHQPFNL N >gi|257257259|gb|ACDX02000002.1| GENE 218 205042 - 207150 3026 702 aa, chain - ## HITS:1 COG:NMB0293 KEGG:ns NR:ns ## COG: NMB0293 COG1629 # Protein_GI_number: 15676215 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Neisseria meningitidis MC58 # 1 702 1 703 703 1272 92.0 0 MQYSARLSLLPALLASAFPLYAADTTDSEHYTATLPTVTVVGQSDTSVLKGYINYDEAAV TRNGQLIKETPQTVDTLNIQKNKNYGTNDLSSILEGNAGIDAAYDMRGESIFLRGFQADA SDIYRDGVRESGQVRRSTANIERVEILKGPSSVLYGRTNGGGVINMVSKYANFKQSRNIG AVYGSWANRSLNMDINEVLNKNVAIRLTSEVGRANSFRSGIDSKNVMVSPSITVKLDNGL KWTGQYTYDNVERTPDRSPTKSVYDRFGLPYRMGFAHPNDFVKDKLQVWRSDLEYAFNDK WRAQWQLAHRTAAQDFDHFYAGSENGSLIKRNYAWQQTDNKTLSSNFTLNGDYHIGRFEN HLTVGLDYSREHRNPTLGFSRAFSASINPYDRAIWPASGRLQPVLTQNRHKADSYGIFVQ NIFSATPDLKFVLGGRYDKYTFNSENKLTGSSRQYSGHSFSPNIGAVWNVTPAHTLYASY NKGFAPYGGRDGYLSIDTSSSAVFNADPEYTRQYETGVKSSWLDDRLSTTLSAYQIERFN IRYRPDAQNDPYTWAVGGKHRSRGVELSAIGQIIPKKLYLRGSLGVMQAKVVEDKENPDR VGIHLDNTSNVTGNLFFRYTPTENLYGEIGVTGTGKRYGYNSSQKATTTLPGFVRTDAML GWNRKNLNLTFAVGNLFNQKYWRSDAMPGAPRTYTARVNYSF >gi|257257259|gb|ACDX02000002.1| GENE 219 207413 - 207919 251 168 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 [Bacillus selenitireducens MLS10] # 7 162 4 155 164 101 35 3e-20 MNTIPPRRAVYAGSFDPPTLGHLWMIQEAQALFDELVVAIGINPEKHNTYTIDERRDMLE AITEGFPNVRISVFENRFLVRYAREIGAGFIVRGIRSAADYEYERSMRYINSDLAPEIST VFLMPPREIAEVSSTMVKGLVGPDGWHDIIRRYLPEAVYEKIVQDYET >gi|257257259|gb|ACDX02000002.1| GENE 220 208049 - 208735 1069 228 aa, chain - ## HITS:1 COG:NMA0420 KEGG:ns NR:ns ## COG: NMA0420 COG0670 # Protein_GI_number: 15793425 # Func_class: R General function prediction only # Function: Integral membrane protein, interacts with FtsH # Organism: Neisseria meningitidis Z2491 # 1 228 1 227 227 259 71.0 4e-69 MRNDVYDYTATGQVAKNTVLQKTYRLLGLSFIPAVAGAYFSGQFGLNLFSLFGQGWMGLV AVLVFFYGMTFLIEKNRYSNVGATLLMIFTFGMGVLISPLLQYTLAIPNGTQIVGIAAAM TAGVFFTMSAMARRTNVNMNSLGRFLTVGAVVLMIAMIANFFLQIPALSLAVSAAFVLFS SLMIMWQVRTVIDGGEDSHISAALTIFISIYNIFSSLLRILLAFSGDD >gi|257257259|gb|ACDX02000002.1| GENE 221 208948 - 209769 648 273 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|288575439|ref|ZP_05976970.2| ## NR: gi|288575439|ref|ZP_05976970.2| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 273 1 273 273 380 100.0 1e-104 MKKVLALICTATLAACGGGGGGGNSTPSSQSTPNAGPSNPSTSQKPATPPSTTTPAKPET GKTPTAPKTPATPAVPTAAQQTVGGNSIAIDNSNIKHIRVDGVDFDLTQSGGVSLNNWKG KVPGFISGIASGEPKSVQKFLVNTASANATAGVLEVNGKKQAFFSGRFTPAAELPKGQVH YNTSVASMHSGANYNITRTELTANFDSKKLTGTISRDAAFGGNIAVNAQISGNKFDQSGA TQVKGGFFGKNAAEVAGGFSSGNTVGAFVGSKK >gi|257257259|gb|ACDX02000002.1| GENE 222 210074 - 210715 941 213 aa, chain + ## HITS:1 COG:NMA0582 KEGG:ns NR:ns ## COG: NMA0582 COG0461 # Protein_GI_number: 15793573 # Func_class: F Nucleotide transport and metabolism # Function: Orotate phosphoribosyltransferase # Organism: Neisseria meningitidis Z2491 # 1 212 1 212 213 357 91.0 7e-99 MSDFRQDFLKFALAQNVLKFGEFTTKAGRQSPYFFNAGLFNDGASTLQLAKFYAQAIIES GVKFDMLFGPAYKGIILAAATAMMLAEKGVNVPFAYNRKEAKDHGEGGVLVGAPLKGRVL IIDDVISAGTSVRESVKLIEAEGATPAAVAIALDRMEKGTGELSAVQEVEKQYGLPVVAI ANLNDLFTLLQNNAEFGGFLEPVRAYRERYGVA >gi|257257259|gb|ACDX02000002.1| GENE 223 210828 - 211289 633 153 aa, chain + ## HITS:1 COG:no KEGG:NMC0344 NR:ns ## KEGG: NMC0344 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 153 1 144 144 149 52.0 4e-35 MPACICPHCKTSLWVKDTQLNVAQGFVICNKCEGLFKAKDSLAPSSAPANPDTLPNAVTD VRLVHDMGGNIRNRKQLSRHEIASLLDSAERAKKAKEEAARRVEEEKRRTEEFQALMAAA AKPAKSEEGFNWTLAVLVALTVLIMQLFYLVLL >gi|257257259|gb|ACDX02000002.1| GENE 224 211286 - 212596 1981 436 aa, chain + ## HITS:1 COG:NMA0580_1 KEGG:ns NR:ns ## COG: NMA0580_1 COG0548 # Protein_GI_number: 15793571 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate kinase # Organism: Neisseria meningitidis Z2491 # 7 283 7 283 283 301 58.0 1e-81 MNTSPGFVADFREAAPYIHYLRGKTLVIGITDSLLEGDTLNRLAADFHLLAGLGVRLVLV HGTRHFLNCLAADRQFVPQYHRNRRITDDATLRDAKQAVGMIRSDIEAALCSSASAPLRN KPIPTASGNFLTARPLGVIDGIDMGYTGIVRKTDTDSINRRLDDGAIVLISPLGHSYGGK TFNLSMSEAAEAVAVALQAEKLVYLTEEAGICNADGILMSTLSSGEVRHLIETAHNVPVR LLQAAVNAVENGVSRVQILSGREDGGLLRELFTREGCGTAIARDAFVSIRQAHSRDIPRI IALIRPLEEQGILLHRSREYLENHISGFSVLEHDRNIYGCVALKTFDDPEIGELACLVVS PEARDGGYGEMLLDHLFQKAQSLGIRRLFALSTHTGEWFVERGFQTTSPDALPEERRRDY LANGRNSQVFVRNIEP >gi|257257259|gb|ACDX02000002.1| GENE 225 212986 - 213336 359 116 aa, chain + ## HITS:1 COG:no KEGG:NLA_8450 NR:ns ## KEGG: NLA_8450 # Name: not_defined # Def: transposase # Organism: N.lactamica # Pathway: not_defined # 1 116 106 221 221 206 94.0 2e-52 MSKYTLHFKYQAVLHYLHIRSQQRTADHYGISRTHLRRWIRAYQEGGIGALEHPQSKTMT DHRKNPFIADKPDHEKTQAELIEELCYMRAKVAYLKELKVLSQKRTAKDKAKPSKH Prediction of potential genes in microbial genomes Time: Sat Jul 16 23:38:51 2011 Seq name: gi|257257256|gb|ACDX02000003.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont2.1, whole genome shotgun sequence Length of sequence - 169691 bp Number of predicted genes - 138, with homology - 138 Number of transcription units - 88, operones - 31 average op.length - 2.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 554 - 593 9.3 1 1 Tu 1 . - CDS 619 - 2067 2090 ## COG0513 Superfamily II DNA and RNA helicases - Prom 2097 - 2156 1.6 + Prom 2296 - 2355 5.5 2 2 Tu 1 . + CDS 2492 - 2734 423 ## gi|288575447|ref|ZP_05976978.2| putative lipoprotein + Term 2751 - 2802 4.1 - Term 2842 - 2898 17.0 3 3 Tu 1 . - CDS 2927 - 3568 991 ## COG2999 Glutaredoxin 2 - Prom 3728 - 3787 3.6 + Prom 3783 - 3842 3.0 4 4 Tu 1 . + CDS 3870 - 6083 3253 ## COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases + Term 6096 - 6147 13.1 - Term 6349 - 6397 14.7 5 5 Tu 1 . - CDS 6423 - 7466 1547 ## COG1064 Zn-dependent alcohol dehydrogenases - Prom 7612 - 7671 7.2 6 6 Tu 1 . + CDS 7916 - 9388 2190 ## COG1012 NAD-dependent aldehyde dehydrogenases + Term 9426 - 9465 8.6 - Term 9414 - 9453 8.6 7 7 Op 1 . - CDS 9511 - 9759 194 ## gi|261364100|ref|ZP_05976983.1| putative membrane protein 8 7 Op 2 . - CDS 9760 - 10008 70 ## gi|261364101|ref|ZP_05976984.1| putative NADH-ubiquinone oxidoreductase chain 6 - Term 10034 - 10095 11.6 9 8 Op 1 . - CDS 10102 - 11580 2020 ## COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases - Prom 11608 - 11667 2.8 10 8 Op 2 . - CDS 11711 - 15145 4676 ## COG0587 DNA polymerase III, alpha subunit - Prom 15327 - 15386 13.0 + Prom 15301 - 15360 6.7 11 9 Tu 1 . + CDS 15598 - 16500 1157 ## COG0524 Sugar kinases, ribokinase family + Term 16621 - 16669 6.2 - Term 16605 - 16662 13.1 12 10 Tu 1 . - CDS 16674 - 18326 2038 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains - Prom 18382 - 18441 4.1 + Prom 18518 - 18577 4.1 13 11 Op 1 . + CDS 18654 - 19022 173 ## NT05HA_1841 filamentation induced by cAMP protein Fic 14 11 Op 2 . + CDS 19097 - 19807 781 ## PPSC2_c1420 protein + Term 19864 - 19905 10.6 - Term 19852 - 19893 10.6 15 12 Op 1 10/0.027 - CDS 19944 - 21488 1584 ## COG0029 Aspartate oxidase 16 12 Op 2 . - CDS 21540 - 22652 1270 ## COG0379 Quinolinate synthase - Prom 22730 - 22789 4.5 + Prom 22692 - 22751 6.6 17 13 Op 1 2/0.324 + CDS 22855 - 23793 1349 ## COG4111 Uncharacterized conserved protein 18 13 Op 2 . + CDS 23869 - 24750 410 ## PROTEIN SUPPORTED gi|163755345|ref|ZP_02162465.1| 30S ribosomal protein S6 + Term 24795 - 24857 11.2 - Term 25039 - 25088 7.5 19 14 Tu 1 . - CDS 25107 - 25673 544 ## gi|261364113|ref|ZP_05976996.1| conserved hypothetical protein - Prom 25789 - 25848 3.9 - Term 25704 - 25746 -0.8 20 15 Op 1 3/0.108 - CDS 25884 - 26585 1094 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) 21 15 Op 2 . - CDS 26587 - 27396 909 ## COG0169 Shikimate 5-dehydrogenase - Prom 27428 - 27487 2.8 + Prom 27475 - 27534 5.0 22 16 Tu 1 . + CDS 27640 - 29058 2245 ## COG0174 Glutamine synthetase + Term 29078 - 29146 21.1 + Prom 29127 - 29186 4.4 23 17 Tu 1 . + CDS 29315 - 30379 1746 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases - Term 30630 - 30680 11.0 24 18 Tu 1 . - CDS 30697 - 32871 2343 ## COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid - Prom 33006 - 33065 8.2 - Term 33120 - 33157 8.0 25 19 Op 1 2/0.324 - CDS 33231 - 33869 216 ## PROTEIN SUPPORTED gi|157803532|ref|YP_001492081.1| 50S ribosomal protein L35 26 19 Op 2 2/0.324 - CDS 33866 - 34237 532 ## COG3759 Predicted membrane protein - Prom 34296 - 34355 2.4 - Term 34324 - 34366 -0.9 27 20 Op 1 . - CDS 34504 - 34926 556 ## COG0720 6-pyruvoyl-tetrahydropterin synthase 28 20 Op 2 . - CDS 34937 - 35452 570 ## NMC0465 hypothetical protein - Term 35525 - 35563 -0.1 29 21 Tu 1 . - CDS 35590 - 36249 1012 ## COG0603 Predicted PP-loop superfamily ATPase - Prom 36307 - 36366 3.6 - Term 36345 - 36394 7.1 30 22 Tu 1 . - CDS 36412 - 37050 1189 ## COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase - Term 37370 - 37419 13.6 31 23 Tu 1 . - CDS 37426 - 39261 2776 ## COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase - Prom 39406 - 39465 8.0 32 24 Op 1 15/0.000 + CDS 39725 - 41170 2101 ## COG0364 Glucose-6-phosphate 1-dehydrogenase 33 24 Op 2 6/0.054 + CDS 41387 - 42082 942 ## COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase 34 24 Op 3 2/0.324 + CDS 42063 - 43064 1546 ## COG0837 Glucokinase 35 24 Op 4 2/0.324 + CDS 43114 - 43962 1463 ## COG1737 Transcriptional regulators + Prom 43966 - 44025 2.3 36 24 Op 5 . + CDS 44153 - 45796 2755 ## COG0166 Glucose-6-phosphate isomerase + Term 45820 - 45870 13.6 - Term 46115 - 46158 -0.5 37 25 Tu 1 . - CDS 46191 - 46784 426 ## COG3663 G:T/U mismatch-specific DNA glycosylase 38 26 Op 1 1/0.378 - CDS 46838 - 47740 817 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 39 26 Op 2 . - CDS 47789 - 48406 649 ## COG0135 Phosphoribosylanthranilate isomerase - Prom 48428 - 48487 6.6 + Prom 48472 - 48531 5.3 40 27 Tu 1 . + CDS 48758 - 48916 105 ## NMB1480 hypothetical protein + Term 49061 - 49099 9.5 + Prom 49081 - 49140 5.4 41 28 Tu 1 . + CDS 49172 - 50089 806 ## Alvin_2718 hypothetical protein + Term 50123 - 50160 7.3 + Prom 50192 - 50251 5.2 42 29 Op 1 . + CDS 50345 - 51604 1859 ## COG1158 Transcription termination factor + Term 51615 - 51665 8.5 43 29 Op 2 2/0.324 + CDS 51703 - 52101 579 ## COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 44 29 Op 3 . + CDS 52204 - 53394 1776 ## COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF + Term 53412 - 53458 11.4 + Prom 53437 - 53496 6.6 45 30 Tu 1 . + CDS 53557 - 55152 2328 ## COG4108 Peptide chain release factor RF-3 + Term 55158 - 55210 11.7 - Term 55145 - 55198 10.1 46 31 Op 1 2/0.324 - CDS 55213 - 55734 486 ## COG3161 4-hydroxybenzoate synthetase (chorismate lyase) 47 31 Op 2 12/0.027 - CDS 55762 - 56430 950 ## COG0132 Dethiobiotin synthetase 48 31 Op 3 . - CDS 56427 - 57719 966 ## COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase - Prom 57881 - 57940 4.4 + Prom 57823 - 57882 6.8 49 32 Tu 1 . + CDS 57914 - 59908 1638 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) + Term 60004 - 60049 10.1 - Term 60186 - 60250 16.1 50 33 Op 1 9/0.027 - CDS 60273 - 61691 550 ## PROTEIN SUPPORTED gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 51 33 Op 2 27/0.000 - CDS 61750 - 64965 3763 ## COG0841 Cation/multidrug efflux pump 52 33 Op 3 . - CDS 64977 - 66254 1382 ## COG0845 Membrane-fusion protein - Prom 66406 - 66465 6.6 + Prom 66404 - 66463 9.5 53 34 Tu 1 . + CDS 66534 - 67124 727 ## COG1309 Transcriptional regulator + Term 67139 - 67195 11.3 - Term 67129 - 67180 12.2 54 35 Tu 1 . - CDS 67397 - 70000 3320 ## COG0308 Aminopeptidase N - Prom 70097 - 70156 10.5 - Term 70367 - 70413 10.1 55 36 Tu 1 . - CDS 70591 - 72234 2380 ## COG1620 L-lactate permease - Prom 72375 - 72434 9.3 + Prom 72333 - 72392 10.5 56 37 Tu 1 . + CDS 72630 - 73406 930 ## COG2186 Transcriptional regulators + Term 73586 - 73636 15.3 - Term 73751 - 73788 3.4 57 38 Tu 1 . - CDS 73853 - 75571 2473 ## COG4178 ABC-type uncharacterized transport system, permease and ATPase components - Prom 75697 - 75756 2.4 - Term 75696 - 75753 4.1 58 39 Op 1 1/0.378 - CDS 75809 - 77287 1699 ## COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid 59 39 Op 2 1/0.378 - CDS 77281 - 78027 732 ## COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid - Prom 78091 - 78150 2.3 - Term 78062 - 78113 15.1 60 40 Tu 1 . - CDS 78224 - 80425 2047 ## COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid - Prom 80472 - 80531 7.3 + Prom 81049 - 81108 5.4 61 41 Op 1 . + CDS 81139 - 81372 461 ## COG2501 Uncharacterized conserved protein 62 41 Op 2 . + CDS 81350 - 81568 125 ## NMA0634 hypothetical protein + Prom 81740 - 81799 5.2 63 42 Tu 1 . + CDS 81860 - 82696 1280 ## COG0613 Predicted metal-dependent phosphoesterases (PHP family) + Prom 83301 - 83360 5.8 64 43 Tu 1 . + CDS 83383 - 84216 895 ## COG0560 Phosphoserine phosphatase + Term 84248 - 84305 11.7 + Prom 84507 - 84566 5.8 65 44 Tu 1 . + CDS 84617 - 86590 2610 ## COG1629 Outer membrane receptor proteins, mostly Fe transport + Term 86612 - 86663 16.1 - Term 86930 - 86977 14.3 66 45 Tu 1 . - CDS 87003 - 88139 1463 ## COG0687 Spermidine/putrescine-binding periplasmic protein + Prom 88412 - 88471 9.6 67 46 Op 1 2/0.324 + CDS 88506 - 89093 931 ## COG3310 Uncharacterized protein conserved in bacteria 68 46 Op 2 . + CDS 89115 - 89474 488 ## COG2832 Uncharacterized protein conserved in bacteria + Term 89543 - 89585 -0.8 + Prom 89626 - 89685 5.5 69 47 Tu 1 . + CDS 89713 - 90333 1154 ## COG0009 Putative translation factor (SUA5) + Term 90505 - 90554 12.2 + Prom 90580 - 90639 5.4 70 48 Tu 1 . + CDS 90679 - 91491 1142 ## NLA_7870 fimbrial assembly protein + Term 91568 - 91607 6.0 + Prom 91579 - 91638 4.4 71 49 Tu 1 . + CDS 91802 - 92233 618 ## COG2510 Predicted membrane protein + Term 92248 - 92311 19.8 - Term 92243 - 92292 16.3 72 50 Op 1 11/0.027 - CDS 92326 - 92991 1120 ## COG0637 Predicted phosphatase/phosphohexomutase 73 50 Op 2 . - CDS 93003 - 95261 3562 ## COG1554 Trehalose and maltose hydrolases (possible phosphorylases) - Prom 95291 - 95350 1.9 - Term 95326 - 95370 2.5 74 51 Tu 1 . - CDS 95384 - 96736 1621 ## COG0477 Permeases of the major facilitator superfamily - Prom 96925 - 96984 4.9 75 52 Tu 1 . + CDS 97334 - 98788 1886 ## COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) + Term 98976 - 99020 2.2 - Term 99167 - 99218 16.1 76 53 Tu 1 . - CDS 99232 - 101289 3122 ## COG0855 Polyphosphate kinase - Prom 101532 - 101591 5.2 - Term 101692 - 101734 11.2 77 54 Tu 1 . - CDS 101767 - 103443 2761 ## COG2759 Formyltetrahydrofolate synthetase - Prom 103536 - 103595 5.0 + Prom 103544 - 103603 3.8 78 55 Tu 1 . + CDS 103642 - 104430 1013 ## COG0500 SAM-dependent methyltransferases + Term 104444 - 104485 10.6 79 56 Op 1 . + CDS 104994 - 105455 642 ## COG0511 Biotin carboxyl carrier protein + Term 105459 - 105515 13.6 80 56 Op 2 . + CDS 105526 - 105717 356 ## BPP1343 hypothetical protein 81 56 Op 3 3/0.108 + CDS 105753 - 107114 2280 ## COG0439 Biotin carboxylase + Term 107139 - 107185 4.3 + Prom 107186 - 107245 2.8 82 57 Tu 1 . + CDS 107409 - 108296 1459 ## PROTEIN SUPPORTED gi|241759137|ref|ZP_04757245.1| ribosomal protein L11 methyltransferase + Term 108319 - 108363 8.1 - Term 108361 - 108407 -0.2 83 58 Tu 1 . - CDS 108418 - 109041 318 ## SUN_1494 hypothetical protein - Prom 109113 - 109172 9.2 - Term 109518 - 109562 4.1 84 59 Op 1 42/0.000 - CDS 109575 - 110000 611 ## COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) 85 59 Op 2 42/0.000 - CDS 110011 - 111408 1581 ## COG0055 F0F1-type ATP synthase, beta subunit 86 59 Op 3 42/0.000 - CDS 111447 - 112322 529 ## COG0224 F0F1-type ATP synthase, gamma subunit 87 59 Op 4 41/0.000 - CDS 112347 - 113894 1476 ## COG0056 F0F1-type ATP synthase, alpha subunit 88 59 Op 5 38/0.000 - CDS 113905 - 114438 444 ## COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 89 59 Op 6 37/0.000 - CDS 114443 - 114913 421 ## COG0711 F0F1-type ATP synthase, subunit b 90 59 Op 7 40/0.000 - CDS 114985 - 115221 413 ## COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K 91 59 Op 8 8/0.054 - CDS 115283 - 116134 505 ## COG0356 F0F1-type ATP synthase, subunit a 92 59 Op 9 2/0.324 - CDS 116139 - 116492 193 ## COG3312 F0F1-type ATP synthase, subunit I - Prom 116647 - 116706 10.2 - Term 116681 - 116728 10.4 93 60 Tu 1 . - CDS 116759 - 117616 1295 ## COG1475 Predicted transcriptional regulators - Prom 117647 - 117706 4.7 + Prom 117681 - 117740 8.2 94 61 Tu 1 . + CDS 117771 - 118340 464 ## gi|261364188|ref|ZP_05977071.1| putative membrane protein 95 62 Tu 1 . - CDS 118892 - 119809 1039 ## COG3039 Transposase and inactivated derivatives, IS5 family - Prom 119830 - 119889 2.8 - Term 120220 - 120260 8.2 96 63 Tu 1 . - CDS 120362 - 121936 1508 ## COG0306 Phosphate/sulphate permeases - Prom 121982 - 122041 4.2 + Prom 121938 - 121997 6.1 97 64 Tu 1 . + CDS 122109 - 123209 511 ## COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases + Term 123349 - 123387 6.2 - Term 123336 - 123374 6.2 98 65 Op 1 9/0.027 - CDS 123391 - 124755 1564 ## COG2010 Cytochrome c, mono- and diheme variants 99 65 Op 2 9/0.027 - CDS 124786 - 124953 77 ## COG4736 Cbb3-type cytochrome oxidase, subunit 3 100 65 Op 3 12/0.027 - CDS 124958 - 125569 912 ## COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit 101 65 Op 4 . - CDS 125593 - 127026 1780 ## COG3278 Cbb3-type cytochrome oxidase, subunit 1 + Prom 127163 - 127222 9.3 102 66 Op 1 2/0.324 + CDS 127355 - 129118 2383 ## COG3975 Predicted protease with the C-terminal PDZ domain 103 66 Op 2 . + CDS 129183 - 129623 782 ## COG3453 Uncharacterized protein conserved in bacteria + Term 129652 - 129710 1.1 - Term 129710 - 129748 1.6 104 67 Tu 1 . - CDS 129766 - 130596 901 ## COG0388 Predicted amidohydrolase - Term 130918 - 130969 13.7 105 68 Op 1 . - CDS 131014 - 132927 2628 ## COG1154 Deoxyxylulose-5-phosphate synthase - Prom 132957 - 133016 5.2 106 68 Op 2 . - CDS 133090 - 133962 814 ## COG0287 Prephenate dehydrogenase - Prom 134001 - 134060 5.2 + Prom 134087 - 134146 5.7 107 69 Tu 1 . + CDS 134174 - 135259 1061 ## COG0859 ADP-heptose:LPS heptosyltransferase + Term 135347 - 135387 7.3 108 70 Tu 1 . - CDS 135330 - 136367 757 ## COG2801 Transposase and inactivated derivatives - Prom 136452 - 136511 3.9 - Term 136771 - 136808 2.6 109 71 Tu 1 . - CDS 136828 - 137466 853 ## COG2945 Predicted hydrolase of the alpha/beta superfamily 110 72 Tu 1 . - CDS 137613 - 138584 1000 ## COG3547 Transposase and inactivated derivatives 111 73 Tu 1 . - CDS 138741 - 139742 1259 ## COG3735 Uncharacterized protein conserved in bacteria - Prom 139766 - 139825 2.1 - Term 139811 - 139857 9.6 112 74 Tu 1 . - CDS 139881 - 140759 1305 ## COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases - Prom 140784 - 140843 3.1 - Term 140855 - 140909 15.1 113 75 Op 1 5/0.081 - CDS 140957 - 142087 916 ## COG5430 Uncharacterized secreted protein 114 75 Op 2 10/0.027 - CDS 142078 - 144495 2948 ## COG3188 P pilus assembly protein, porin PapC 115 75 Op 3 . - CDS 144533 - 145258 727 ## COG3121 P pilus assembly protein, chaperone PapD 116 75 Op 4 . - CDS 145301 - 145933 713 ## gi|261364210|ref|ZP_05977093.1| putative lipoprotein - Prom 146080 - 146139 8.5 + Prom 146075 - 146134 9.2 117 76 Op 1 . + CDS 146366 - 146992 730 ## COG0125 Thymidylate kinase + Term 147129 - 147171 -0.6 + Prom 147066 - 147125 2.8 118 76 Op 2 . + CDS 147212 - 148492 1863 ## COG0281 Malic enzyme + Term 148516 - 148569 17.1 - Term 148512 - 148549 8.0 119 77 Op 1 . - CDS 148560 - 149207 1103 ## COG0546 Predicted phosphatases 120 77 Op 2 . - CDS 149268 - 150227 1553 ## COG1230 Co/Zn/Cd efflux system component 121 77 Op 3 . - CDS 150273 - 151100 870 ## COG2833 Uncharacterized protein conserved in bacteria - Prom 151124 - 151183 10.9 + Prom 151116 - 151175 6.4 122 78 Tu 1 . + CDS 151408 - 152028 1062 ## COG2834 Outer membrane lipoprotein-sorting protein + Term 152040 - 152098 15.3 - Term 152206 - 152242 7.5 123 79 Tu 1 . - CDS 152252 - 153112 1073 ## COG0500 SAM-dependent methyltransferases - Prom 153194 - 153253 2.6 + Prom 153079 - 153138 2.7 124 80 Op 1 . + CDS 153245 - 153694 333 ## COG0328 Ribonuclease HI 125 80 Op 2 . + CDS 153752 - 155104 1272 ## COG0232 dGTP triphosphohydrolase + Term 155259 - 155328 31.4 + TRNA 155237 - 155313 81.7 # Arg ACG 0 0 + TRNA 155330 - 155404 64.3 # Glu TTC 0 0 - Term 155708 - 155769 21.1 126 81 Op 1 . - CDS 155794 - 155997 362 ## NLA_6790 hypothetical protein - Prom 156020 - 156079 2.7 127 81 Op 2 . - CDS 156116 - 157285 1564 ## COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases - Prom 157520 - 157579 4.0 - Term 157565 - 157602 8.0 128 82 Op 1 . - CDS 157623 - 158558 1444 ## COG0181 Porphobilinogen deaminase 129 82 Op 2 . - CDS 158605 - 158982 407 ## gi|261364224|ref|ZP_05977107.1| 50S ribosomal protein L31 type B - Prom 159168 - 159227 7.8 + Prom 159168 - 159227 5.3 130 83 Op 1 11/0.027 + CDS 159266 - 159781 759 ## COG0319 Predicted metal-dependent hydrolase 131 83 Op 2 . + CDS 159783 - 160607 1231 ## COG4535 Putative Mg2+ and Co2+ transporter CorC + Term 160648 - 160698 16.1 - Term 160630 - 160692 25.1 132 84 Tu 1 . - CDS 160708 - 161496 1014 ## COG1651 Protein-disulfide isomerase - Prom 161577 - 161636 4.1 + Prom 161457 - 161516 5.0 133 85 Tu 1 . + CDS 161635 - 163803 2015 ## COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase + Term 163818 - 163866 11.0 + Prom 163816 - 163875 4.0 134 86 Op 1 . + CDS 163912 - 164544 594 ## COG0177 Predicted EndoIII-related endonuclease + Prom 164546 - 164605 11.3 135 86 Op 2 . + CDS 164715 - 166268 1997 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain + Term 166295 - 166343 12.7 + Prom 166324 - 166383 5.3 136 87 Op 1 2/0.324 + CDS 166458 - 167978 2164 ## COG1757 Na+/H+ antiporter + Term 167992 - 168039 11.1 137 87 Op 2 . + CDS 168047 - 169135 1459 ## COG1472 Beta-glucosidase-related glycosidases + Term 169165 - 169215 15.4 - Term 169152 - 169203 11.2 138 88 Tu 1 . - CDS 169362 - 169592 213 ## COG2801 Transposase and inactivated derivatives Predicted protein(s) >gi|257257256|gb|ACDX02000003.1| GENE 1 619 - 2067 2090 482 aa, chain - ## HITS:1 COG:NMB1422 KEGG:ns NR:ns ## COG: NMB1422 COG0513 # Protein_GI_number: 15677281 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Neisseria meningitidis MC58 # 13 482 3 457 457 721 81.0 0 MPHPSGQKDTAMNPFASLGLGSELVSALTEQGYENPTPIQAAAIPKALAGHDLLAAAQTG TGKTAAFMLPSLERLKRYATASTSPAMHPVRMLVLTPTRELADQIDQNVQGYIKNLPLRH TVLFGGVNMDKQTADLRAGCEIVVATVGRLLDHVKQKNINLNKVEIVVLDEADRMLDMGF IDDIRKIMQMLPKQRQTLLFSATFAPPIRKLAKDFMNAPEIVEVAAQNTTSANVEQHIIA VDALKKRNLLERLIVDLQMNQVIVFCKTKQSVDQVTRDLVRRNLAAQSIHGDKSQQSRLE TLNAFKEGSLRVLVATDVAARGLDIAELPFVINYELPTQPEDYVHRIGRTGRAGADGVAI SLMDKTEQKMFEAIKELTGNDLAVERIEGFEPQWWGTDADGDAATDTQHAPTRSRGSDRN RSERNNRSERNERNERNDRGDKSPKADKADPGSACGTIAGRSRRSRRERQPCALLQPNYG TK >gi|257257256|gb|ACDX02000003.1| GENE 2 2492 - 2734 423 80 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|288575447|ref|ZP_05976978.2| ## NR: gi|288575447|ref|ZP_05976978.2| putative lipoprotein [Neisseria mucosa ATCC 25996] putative lipoprotein [Neisseria mucosa ATCC 25996] # 1 65 24 88 103 94 100.0 3e-18 MKTLLIAVAAASLMLGACSSSKTSEEAKTPSVSVEEAIAQCQQASGANQDRAVFDACMKD KGYQRSAAEGGAAASAPAAQ >gi|257257256|gb|ACDX02000003.1| GENE 3 2927 - 3568 991 213 aa, chain - ## HITS:1 COG:NMA1990 KEGG:ns NR:ns ## COG: NMA1990 COG2999 # Protein_GI_number: 15794872 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin 2 # Organism: Neisseria meningitidis Z2491 # 1 213 1 213 213 364 80.0 1e-101 MKLYVYDHCPFCVRARMAAGLLGADVEEVVLANDDEATPIGMIGAKQVPILQKEDGSFMG ESLDVVRYLDREGRLKNEIRPEIQAWFDKVGGYNTKLVHPRVVKIGLPEFETPEAVKYFT DKKEKNIGSFSTNLDKTGQYVERLHEDLAELETLMTEGGAGLNGEAGMEDVLVFPILRNL TVVRGVEWPQKIMDYLLRMSEASGVPLYFDRAL >gi|257257256|gb|ACDX02000003.1| GENE 4 3870 - 6083 3253 737 aa, chain + ## HITS:1 COG:NMB1735 KEGG:ns NR:ns ## COG: NMB1735 COG0317 # Protein_GI_number: 15677581 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Guanosine polyphosphate pyrophosphohydrolases/synthetases # Organism: Neisseria meningitidis MC58 # 1 737 1 737 737 1469 97.0 0 MTNTSPIQDTQSATLQELREWFDSYCAALPDNDKNLIGTAWSLAQEHYPADAVTPYGEPL LDHFLGAAQMVNELDLLPDAVAATLLADIGRYVPDWNLLVSERCNSTVAELVKGVDEVQK LTHFARVDSLATPEERAQQAETMRKMLLAMVTDIRVVLIKLAMRTRTMQFLSEVPDSPEK RAVAKETLDIFAPLANRLGVWQLKWQLEDLGFRHQEPEKYREIALLLDEKRTERLEYIEN FLNILRAELKKYNVHFEVAGRPKHIYSIYKKMVKKKLSFDGLFDIRAVRILVDTVPECYT TLGIVHSLWQPIPGEFDDYIANPKGNGYKSLHTVIVGPEDKGVEVQIRTFDMHQFNEFGV AAHWRYKEGGKGDSAYEQKIAWLRQLLDWRENMAESGKEDLAAAFKTELFNDTIYVLTPH GKVLSLPTGATPIDFAYALHSSIGDRCRGAKVEGQIVPLSTPLENGQRVEIITAKEGHPS VNWLYEGWVKSSKAIGKIRAYIRQQNADTVREEGRVQLDKQLAKLTPKPNLQELAENLGY KKLDDLYTAVGQGEISNRAIQKACGTLNEPPPVPVSETTIVKQSKIKKGGKTGVLIDGED GLMTTLAKCCKPAPPDDIVGFVTRERGISVHRKTCPSFQHLAEQAPEKVLDASWAALQEG QVFAVDVEIRAQDRSGLLRDVSDALARHKLNVTAVQTQSRDLEASMRFTLEVKQVNDLPR VLASLGDVKGVLSVTRL >gi|257257256|gb|ACDX02000003.1| GENE 5 6423 - 7466 1547 347 aa, chain - ## HITS:1 COG:NMB0546 KEGG:ns NR:ns ## COG: NMB0546 COG1064 # Protein_GI_number: 15676452 # Func_class: R General function prediction only # Function: Zn-dependent alcohol dehydrogenases # Organism: Neisseria meningitidis MC58 # 1 347 1 347 348 609 95.0 1e-174 MKMQAVVVNQNVEGDVEVVEREVRPLEYGEALVEVEYCGVCHTDLHVAAGDYGEKPGRVL GHEGIGIVKEVAPGADALKVGDRVSIAWLFQSCGSCEYCNTGRETLCRSVLNAGYTADGG MATHCIVDADYAVKVPDGLDPAQASSITCAGVTTYKGVKVSGVRPGQWIAVYGAGGLGNL GVQYAKKVFGAHVVAIDINDEKLAFAKESGADLVINAAKEDAAKVIQEKTGGAHAAVVTA VSAAAFNSAVDCVRAGGRVVAIGLPPESMDLSIPRLVLDGIEVVGSLVGTRKDLEEAFQF GAEGLVVPKVQLRALDEAPAIFQEMREGKITGRMVIDMKKECGCGHH >gi|257257256|gb|ACDX02000003.1| GENE 6 7916 - 9388 2190 490 aa, chain + ## HITS:1 COG:FN0454 KEGG:ns NR:ns ## COG: FN0454 COG1012 # Protein_GI_number: 19703789 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Fusobacterium nucleatum # 6 490 3 491 491 627 62.0 1e-179 MAKDLNVFDKEYGLLINGVWTKPGALLDSYNPANGELLAKFTDASDADVDAAVAAAQEAF KTWRKTTTTERAAILNKIADVIDENLELFALQETLDNGKPIRETRAADIPLASDHFRYFA SVIRGEEGTATQLDSEDLSIVLREPIGVVGQIIPWNFPFLMAAWKIAPALAAGCTIVIHP SSSTSLSLLSFAQKINHLLPKGVLNIITGRGSKSGEYMLHHKGFNKLAFTGSTEIGRHIG IAAAEMLIPATLELGGKSANIFFDDMPFDKALEGAQKGILFNQGQVCCAGSRIFVQEGIY DKFVNALAEEFKKIKVGLPWEDDTQMGSQVNAGQLETILKYVKIGEQEGCRIITGGKKIE GALGKGEFVEPTLIEADNNARVAQEEIFGPVATVIKFKTEEEVIKMANDSEYGLGGAVWS TDINRCLRVSNALETGRVWVNCYNRLPAGAPFGGYKTSGIGRETHKMMLAAYTQVKNIYI STREEREGFY >gi|257257256|gb|ACDX02000003.1| GENE 7 9511 - 9759 194 82 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261364100|ref|ZP_05976983.1| ## NR: gi|261364100|ref|ZP_05976983.1| putative membrane protein [Neisseria mucosa ATCC 25996] putative membrane protein [Neisseria mucosa ATCC 25996] # 1 82 1 82 82 124 100.0 2e-27 MSDFLLGVLELFAATWDFLSYGKKRISVLRRAYRHGGRRKVWRVLTGRKMEIAVWLVFVM ILAAGMVFAWTIIAWVVWQAFS >gi|257257256|gb|ACDX02000003.1| GENE 8 9760 - 10008 70 82 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261364101|ref|ZP_05976984.1| ## NR: gi|261364101|ref|ZP_05976984.1| putative NADH-ubiquinone oxidoreductase chain 6 [Neisseria mucosa ATCC 25996] putative NADH-ubiquinone oxidoreductase chain 6 [Neisseria mucosa ATCC 25996] # 1 82 1 82 82 152 100.0 6e-36 MNHHKKQNVQAPIESTRQSKVKEFCCELVGNAAGEIVGYILFGLLFMGGVWIIIGMSIWV LIGLLLMTIPAWYWLYQKIKNK >gi|257257256|gb|ACDX02000003.1| GENE 9 10102 - 11580 2020 492 aa, chain - ## HITS:1 COG:NMA1952 KEGG:ns NR:ns ## COG: NMA1952 COG0043 # Protein_GI_number: 15794835 # Func_class: H Coenzyme transport and metabolism # Function: 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases # Organism: Neisseria meningitidis Z2491 # 1 492 1 492 492 981 97.0 0 MKYKDLRDFIAMLEQQGKLKRVAHPVSPHLEMTEIADRVLRAEGPALLFENPIKPDGTRY DYPVLANLFGTPERVAMGMGADSVSKLREIGQTLAYLKEPEPPKGIKDAFSKLPLLKDIW SMAPNVVKNAPCQEIVWEGEDVDLYKLPIQHCWPEDVAPLVTWGLTVTRGPHKKRQNLGI YRQQLIGKNKLIMRWLSHRGGALDYQEFRKLNPDTPYPVAVVLGCDPATILGAVTPVPDT LSEYQFAGLLRGSRTELVKCIGNDLQVPARAEIVLEGVIHPNETALEGPYGDHTGYYNEQ EHFPVFTVERINMRENPIYHSTYTGKPPDEPAVLGVALNEVFVPLLQKQFPEITDFYLPP EGCSYRMAVVSMKKQYAGHAKRVMMGCWSFLRQFMYTKFIIVVDDDVNVRDWKEVIWAVT TRMDPVRDTVLVENTPIDYLDFASPVSGLGGKMGLDATNKWPGETDREWGRVIKKDPAVT AKIDEIWGELGL >gi|257257256|gb|ACDX02000003.1| GENE 10 11711 - 15145 4676 1144 aa, chain - ## HITS:1 COG:NMB1827 KEGG:ns NR:ns ## COG: NMB1827 COG0587 # Protein_GI_number: 15677663 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit # Organism: Neisseria meningitidis MC58 # 1 1144 1 1144 1144 2263 95.0 0 MTEPTYIPLRLHTEFSITDGMVRIKKLIAKAQEYGLPALGISDLMNEFGLVKFYKACRSA GIKPVGAADVWIGNPNAPDKPFRAMLVIRNDAGYLRLSELLTTAYVGKDRNVHHAELNPE WLENGDNSGLICLSGAHYGEVGVNLLNGNEDAARAAALKYAAWFPDAFYLELQRLPERPE WEACVSGSVKLAEELGLPVVATHPTQFMSRDDFNAHEARVCIAGGWVLTDKKRPRDFTPS QFFIPPETMLERFADLPEALENTVEIAKRCNIHITLGKNFLPLFPTPDGLSLDDYLVKLS NEGLQERMVQLYPDEAERAEKMPEYQERLDFELNIIIQMKFPGYFLIVQDFINWAKTHGC PVGPGRGSGAGSLVAYSLKITDLDPLKYALLFERFLNPERVSMPDFDVDFCQANRGRVIE YVREKYGAEAVSQIVTFGTMSSKAVIRDVGRVLELPFTLCDKLSKLIPLEANKPLGLDDA MKAEPQIQELIEAEEADELITLAKKLEDLTRGLGMHAGGVLIAPGKISDYSPVYQADESA SPVSMYDKGDVEDVGLVKFDFLGLRNLTIIEMAQNNIKNTTGDIVDVGTIPLDDQLAYKI FRDANTTAVFQFESTGMKKMLKTAHTTKFEELIAFVSLYRPGPMDNIPDFVARMKGQEFQ YIHPLLEGILAPTYGIMVYQEQVMQAAQIIGGYSLGGADLLRRAMGKKKPEEMVKHREIF AEGAAKQGISREKSDEIFNYMEKFAGYGFNKSHAAAYALISYQTAWLKAHYPAEFMAATM SSELDNTDQLKHFYDDCRANGIEFLPPDINESDYRFTPYPNMKIRYALGAIKGTGEAAVE SIIAARQSGGKFTGLLDFCERVGKEHMNRRTLEALIRGGAFDSIEPNRAMLLANIDLAMN NADQKAANANQGGLFDMMEDAIEPVQLVDAPMWSESEKLAEEKTVIGFYLSGHPFGPYAQ EVRQIAPTKLGRLKPQDSVRLAGFVTAVRTMMGKRGKIAFVSLEDLSGQIEIMVSGQTLE NCADYLKSDQVLIIESKVSRDDYGGGDGLRIMANQVMTLQMARERYARSLSLALAPGHDI ARLATILTAHRLPDTSHIPLQLSYSNGKASGRFQVPPKWMVTPSSALFDELEKLLGSRAV RVNW >gi|257257256|gb|ACDX02000003.1| GENE 11 15598 - 16500 1157 300 aa, chain + ## HITS:1 COG:BS_rbsK KEGG:ns NR:ns ## COG: BS_rbsK COG0524 # Protein_GI_number: 16080645 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Bacillus subtilis # 6 297 4 293 293 206 42.0 6e-53 MLHTKVVVVGSINMDLVTRATQFARAGETLLGSSFHRYMGGKGANQAVAAARLGACVTII GAVGDDDFGLEMVTNLRHEGICTDYVQTIMGQNSGMANITVADEENSIIVIAGANMYLTV ADIEAAEERFAEADIILSQLEIPMECVMAASRLAAKYNKPFILNPAPARAIPKELLEQIT ILTPNRYELAASLGAPQGLSPEELILKSPCPVLMTSGSKGAVYKDPKGRLRHVSGFKVQT SDTTGASDAFNGALAVFWHEGIDIAVRKACAAAALSITRSGAQNGMPFEFELSGFLASQK >gi|257257256|gb|ACDX02000003.1| GENE 12 16674 - 18326 2038 550 aa, chain - ## HITS:1 COG:NMB0387 KEGG:ns NR:ns ## COG: NMB0387 COG0488 # Protein_GI_number: 15676301 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Neisseria meningitidis MC58 # 1 550 9 558 558 1061 99.0 0 MLRVSKVVPPQKTIIKDISLSFFPGAKIGLLGLNGAGKSTVLRIMAGVDKEFEGEAVPMG GIKIGYLPQEPELDPEKTVREEVESGLGEVAAAQKRLEEVYAEYANPDADFDALAEEQGR LEAIIAAGSSTGGGAEHELEIAADALRLPEWDAKIGNLSGGEKRRVALCKLLLSKPDMLL LDEPTNHLDAESVEWLEQFLVRFPGTVVAVTHDRYFLDNAAEWILELDRGHGIPWKGNYS SWLEQKEKRLENEAKSEAARVKAMKQELEWVRQNAKGRQAKSKARLARFEEMSNYEYQKR NETQEIFIPVAERLGNEVIEFVNVSKSFGDKVLIDDLSFKVPAGAIVGIIGPNGAGKSTL FKMISGKEQPDSGEVKIGQTVKMSLIDQSREGLQNDKTVFDNIAEGRDILQVGQFEIPAR QYLGRFNFKGSDQSKIAGNLSGGERGRLHLAKTLLSGGNVLLLDEPSNDLDVETLRALED ALLEFAGSVMVISHDRWFLDRIATHILACEGDSKWVFFDGNYQEYEADKKRRLGEEGAKP KRIKYKPVTR >gi|257257256|gb|ACDX02000003.1| GENE 13 18654 - 19022 173 122 aa, chain + ## HITS:1 COG:no KEGG:NT05HA_1841 NR:ns ## KEGG: NT05HA_1841 # Name: not_defined # Def: filamentation induced by cAMP protein Fic # Organism: A.aphrophilus # Pathway: not_defined # 1 122 253 374 374 225 90.0 4e-58 MRQVSQTGDWNEWCQFFFEAIYWQAVHNLEIAQSIHALYEEMKFIFTQTLSSKHSLAVLD FVFTYPVFRNSRLSELANIPPATANRFTKALLEKGILTLKEEASGRKSALYSFDRMMKLV RV >gi|257257256|gb|ACDX02000003.1| GENE 14 19097 - 19807 781 236 aa, chain + ## HITS:1 COG:no KEGG:PPSC2_c1420 NR:ns ## KEGG: PPSC2_c1420 # Name: not_defined # Def: protein # Organism: P.polymyxa_SC2 # Pathway: not_defined # 40 233 46 230 256 84 31.0 4e-15 MSQHPPAALISCLQQHPIPAGHITALQHFTPRDGFCFHHDDTDWQNSKDYFDECWQALPV APILQDEESNEWFVYLTEPLLGMVGHFQHDDPDLVPSFATIHDFLAAIAAHPEAQDGYEL LHDDCAYQFPNPIPPLDTATRQAAMQQLQQAAEQSDDDEIRQCLHFAWFNLIAKNEITQW LLPYLDDEDMYVQERAIELIGKHNYQDARDKLYELQTTALPNGQTAARRILKMWGS >gi|257257256|gb|ACDX02000003.1| GENE 15 19944 - 21488 1584 514 aa, chain - ## HITS:1 COG:NMB0392 KEGG:ns NR:ns ## COG: NMB0392 COG0029 # Protein_GI_number: 15676306 # Func_class: H Coenzyme transport and metabolism # Function: Aspartate oxidase # Organism: Neisseria meningitidis MC58 # 1 501 1 501 502 902 94.0 0 MQTDCDVLIAGNGLAALTLALSLPESFRIVILCKNQLDDTASRHAQGGIAAAWSGEDDIE KHVADTLEAGAGLCNEAAVRTILSQGKPAIEWLLAQGVAFDRSHDGLHLTREGGHTCRRI AHVADYTGEAVMQSLIAQIRRRPNIHVCERQMALDIQTESGAACGLTVLDCRTQETYRIR ARHTVLAGGGLGQIYATTTTPPECTGDAIAMAIRAGCAVENLEFIQFHPTGLARSSENGR TFLISEAVRGEGGILTNQAGERFMPHYDRRAELAPRDIVARAIAAEIAKQTQDFVSLDIS HQPAEFVRQHFPSIHRHCLSQCGLDITRQAIPVRPVQHYTCGGIQTDPSGRTSLPQLYAL GETACTGLHGANRLASNSLLECVVTARLAAQTIADGRAFQAVPSQRSSENPTAEAGIFSD DLQNIFSRPVLQAFNQRHLGILRNDNGLRRAIAQLRLWKQNQAEPHTASEYEDRNLLECS LAVAQAAYARRQNIGAHFNTDLAERVDWKKQAAG >gi|257257256|gb|ACDX02000003.1| GENE 16 21540 - 22652 1270 370 aa, chain - ## HITS:1 COG:NMA2090 KEGG:ns NR:ns ## COG: NMA2090 COG0379 # Protein_GI_number: 15794965 # Func_class: H Coenzyme transport and metabolism # Function: Quinolinate synthase # Organism: Neisseria meningitidis Z2491 # 1 370 1 370 370 735 97.0 0 MQTAARRSFDYDMPLIQTPTSACQIRQAWAKVADTPDRETAGRLKDEIKTLLKEKNAVLV AHYYVDPLIQDLALETGGCVGDSLEMARFGAEHEAGTLVVAGVRFMGESAKILCPEKTVL MPDLEAECSLDLGCPEEAFSAFCDQHPDRTVVVYANTSAAVKARADWVVTSSVALEIVSY LKSRGEKLIWGPDRHLGDYIRRETGADMLLWQGSCIVHNEFKGQELAALKAEHPDAVVLV HPESPQSVIELGDVVGSTSKLLKAAVSRPEKKFIVATDLGILHEMKKQAPDKEFIAAPTA GNGGSCKSCAFCPWMAMNSLGGIKYALTSGHNEILLDRKLGEAAKLPLQRMLDFAAGLKR GDVFNGMGPA >gi|257257256|gb|ACDX02000003.1| GENE 17 22855 - 23793 1349 312 aa, chain + ## HITS:1 COG:NMB0395 KEGG:ns NR:ns ## COG: NMB0395 COG4111 # Protein_GI_number: 15676309 # Func_class: R General function prediction only # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis MC58 # 1 312 1 312 312 618 98.0 1e-177 MDAYPEAEAPPQSIVELVPVLIAVTDGGLRVLTVAQGTLLPNGPLSPLRNSLQAGVKLWV AKQTSQPMGYVEQLYTFVDTHRRNEHGMPVLYVSYLGLVREAADSILHPDAKWQDCYGYF PWEDLRTDGGQRDAIVSRLRIWANSADTEEVRQKRLKRIHLCWGVEPENWSEEYVLQRYE MLYESGLIAEAAEPQANFDFTLTGQPMRHDHRRVLATALSRLRAKIKYRPVIFELMPPEF TLLQLQNSVEAISGRLLHKQNFRRQIQQQNLIEPSDTGVSGSKGRPAQLYRFRDDVLPDR LISDIGLPLGSR >gi|257257256|gb|ACDX02000003.1| GENE 18 23869 - 24750 410 293 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163755345|ref|ZP_02162465.1| 30S ribosomal protein S6 [Kordia algicida OT-1] # 15 292 11 285 286 162 35 9e-39 MSSENTLFPLPDTLLRPIVEQALSEDLGRRGDITSAAVIAPDKTAKLFLVSREDGVIAGM GLARLAFQTMDPSVRFQAEVQDGQAVRAGQTLAAIEGNARALLAAERTALNYLTHLSGIA TATARAVAEVAEYGTDIVCSRKTIPLLRDLQKYAVRAGGGVNHRMGLDDAVLIKDNHLAY CDSIAQAARQAKQAVGPLTCVEIEVDTLAQLDEAIAAGAERILLDNMDDETLKEAANRCH TQTAHPHTIYCEASGGIGFDRLKRVAQTGVDGIALGYLTHSSRSLDIGLDFVA >gi|257257256|gb|ACDX02000003.1| GENE 19 25107 - 25673 544 188 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261364113|ref|ZP_05976996.1| ## NR: gi|261364113|ref|ZP_05976996.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 188 1 188 188 345 100.0 1e-93 MKPIKPLFLSLLLLTACGTNTPPSAQPEVSLQKQEEQLFGAWDCELKAQRDIHSFAPKFI EFQQKDKLPAHLWAGYIEIEWKEENLNEAAPLRYREWYNGFWRIKDDRHIVMTFESAGSE RLFDVKDLKTTKGRETDRSYMKFSEQMAAKKSFKSTDYQILDINQTSMSITDGESLIACR KIEKVESE >gi|257257256|gb|ACDX02000003.1| GENE 20 25884 - 26585 1094 233 aa, chain - ## HITS:1 COG:NMA2130 KEGG:ns NR:ns ## COG: NMA2130 COG0744 # Protein_GI_number: 15795001 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Neisseria meningitidis Z2491 # 1 233 1 233 233 410 87.0 1e-114 MFRIIKWLIALPLGTFIFFNAYVYGNIITYRAVAPNKTAFMAMRMRQFQNEGKDVALDYR WVPYDRISVNLKKALIASEDAKFAEHGGFDWGGIQYAIKRNKQSGEVKAGGSTISQQLAK NLFLNESRSYVRKGEEAAITAMMEAVTDKDRIFELYLNAIEWHYGVFGAEAASQYFYKRP AANLTKQQAAKLAARVPAPLFYADNPKSKRLRNKTNIILRRMGSAELPESDMD >gi|257257256|gb|ACDX02000003.1| GENE 21 26587 - 27396 909 269 aa, chain - ## HITS:1 COG:NMB0358 KEGG:ns NR:ns ## COG: NMB0358 COG0169 # Protein_GI_number: 15676273 # Func_class: E Amino acid transport and metabolism # Function: Shikimate 5-dehydrogenase # Organism: Neisseria meningitidis MC58 # 1 269 1 269 269 415 76.0 1e-116 MNTIPRYAVFGNPVAHSKSPQIHRQFALQEGVEIEYERICADINGFAQAVEAFFANGGRG ANVTVPFKQEAFALSDEHSERALAAGAVNTLILLGNGKIRGDNTDGLGLTDDISKRLGVE ISGKTVLLLGAGGAVRGVIPVLKEYHPARIVIANRTHAKAAEMAVHFDIDAIPLNELEGG FDIIINGTSGGLSGQLPAVSPKIFEHCTLAYDMVYGEAAQPFLAFARQSGAKQTADGLGM LVGQAAASYRLWRGFAPDVLPVVQYMREL >gi|257257256|gb|ACDX02000003.1| GENE 22 27640 - 29058 2245 472 aa, chain + ## HITS:1 COG:NMB0359 KEGG:ns NR:ns ## COG: NMB0359 COG0174 # Protein_GI_number: 15676274 # Func_class: E Amino acid transport and metabolism # Function: Glutamine synthetase # Organism: Neisseria meningitidis MC58 # 1 472 1 472 472 948 97.0 0 MSIKDAVKLIEESEARFVDLRFTDTKGKQHHFTIPARIVLDDPEEWFENGQAFDGSSIGG WKGIQASDMQLRPDPATAFIDPFFDDTTVVLTCDVIDPADGQGYDRDPRSIARRAEAYLK STGIGDTAYFGPEPEFFVFDGVEFETDMHKTRYEITSESGAWASGLHMDGQNTGHRPTVK GGYAPVAPIDAGQDLRSAMVNILEELGIEVEVHHSEVGTGSQMEIGTRFATLVKRADQTQ DMKYVIQNVAHNFGKTATFMPKPIMGDNGSGMHVHQSIWKDGQNLFAGDGYAGLSDTALY YIGGIIKHAKALNAITNPSTNSYKRLVPHFEAPTKLAYSAKNRSASIRIPSVNSSKARRI EARFPDPTANPYLAFAALLMAGLDGIQNKIHPGDPADKNLYDLPPEEDALVPTVCASLEE ALAALKADHEFLLRGGVFSKDWIDSYIAFKEEDVRRIRMAPHPLEFEMYYSL >gi|257257256|gb|ACDX02000003.1| GENE 23 29315 - 30379 1746 354 aa, chain + ## HITS:1 COG:NMA0808 KEGG:ns NR:ns ## COG: NMA0808 COG1063 # Protein_GI_number: 15793782 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Neisseria meningitidis Z2491 # 1 354 1 354 354 658 96.0 0 MKAARFYDKGDIRIEDIPEPTVAPGTVGINVAWCGICGTDLHEFMEGPIFIPPCGHPHPI SGESAPVTMGHEFSGVVYAVGEGVDDLKVGQHVVVEPYIIRDDVPTGEGSNYHLSKDMNF IGLGGCGGGLAEKIAVKRRWVHPISDKIPLDQAALIEPLSVGHHAYVRSGAKAGDVALVG GAGPIGLLLAAVLKAKGIKVIITELSKARKDKARESGVADYILDPSEVDVVEEVKKLTNG EGVDVAFECTSVNKVLDTMVEACRPTAKVVIVSIWSHPATINVHSVVMKELDVRGTIAYC NDHAETIKLVEEGKINLEPFITQRIKLDELISEGFERLIHNNESAVKIIVNPNL >gi|257257256|gb|ACDX02000003.1| GENE 24 30697 - 32871 2343 724 aa, chain - ## HITS:1 COG:NMA0575 KEGG:ns NR:ns ## COG: NMA0575 COG4773 # Protein_GI_number: 15793566 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid # Organism: Neisseria meningitidis Z2491 # 32 724 32 724 725 340 33.0 5e-93 MPLSKFRPARLPVAVAAALLSAYSFGAGDGVEQVDLPTVQVKGIGKQTTTNYTIPASSAA TGIRLTQRETPQSLSVVTEKQMDDQGLDTLQDVLKQTPGVFHSKMGNNVSGHSEFISRSQ AIDSISVDGAPKFLYDGKAIRRGTNNLDSALYEQVVVVRGASGLSNGGMGEPGGTVALER KKPTAKPAVSVEAGVGSWKHYRFVLDANHPLNADNTLRGRAILVSDHGGDYLPNTSRHNH TFYGILSYDLTPQTHWRLGTEIHRFRNTGSSPFSYLTVAGDPENNQPFKPFAASPRSNSS AKWAYGKENSAEIFTSINHEFENGWALNGNYSHTYGKSDAVSGIAGPFIIYPDYSAKFVA ERDQAKYADQDFSLSLDGDYPLLGRKHEFNAGISYQYNKETPSYYEENEDGVVPDLRLFD GNFTKPAIPYLRDGFAHMKNLSVYGSTRFKLTDRLALIGGGRFVDWQYRYSSNRNDFADS RHKNKVFIPYLGASYDLNDNLTAYTSYTTIFRPQVRYLTKDGTALEPQRGKTYELGLKAS WFEGRLNASASAFMNKRDHLGVVAGKFKNGKKYYRAADNTTTKGVELSVGGRLSDKWLLN ASYAYSKLKNDSGNVVNPSYPAHLFKLFTAYDVTDRLNLGANVNWQSSTNAVSDEYQPLT AAGKEALTQRPYATLDLTAHYKIGKSTRIGLDFENVFNKRYRPMPDIHVYGTPRSLTATL KHTF >gi|257257256|gb|ACDX02000003.1| GENE 25 33231 - 33869 216 212 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157803532|ref|YP_001492081.1| 50S ribosomal protein L35 [Rickettsia canadensis str. McKiel] # 9 212 14 225 225 87 28 3e-16 MKKISVAPENPQYRIVEIFESLQGEGWNTGMPAVFVRLGKCNLACGWCDTDYLKFGMMSL SDILGRLKTYTARNIIITGGEPTIQPHLDTLLDALKAEGYFLCIETNGLKPAPPQIDYVA TSPKACYAAKYETNCIAEADEVRIVADGDVVAFCENMERKIRARYYYLSPCEQNGAMNIY DTIHQIGILNSRPDAPVHWQLSVQTHKWAGIE >gi|257257256|gb|ACDX02000003.1| GENE 26 33866 - 34237 532 123 aa, chain - ## HITS:1 COG:NMA0706 KEGG:ns NR:ns ## COG: NMA0706 COG3759 # Protein_GI_number: 15793684 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis Z2491 # 1 112 1 112 123 183 89.0 7e-47 MKLLPTLLVLLVAAEHFYIAWLEMTQIPSEKAAEMFNLPYEFMEQKRVQTLFSNQGLYNG FLAIGLVWSRFAAPDNAVYGATILFLGFVLIAAAWGAFSSGNKGILIKQGLPAMLAAAAV LAV >gi|257257256|gb|ACDX02000003.1| GENE 27 34504 - 34926 556 140 aa, chain - ## HITS:1 COG:NMA0704 KEGG:ns NR:ns ## COG: NMA0704 COG0720 # Protein_GI_number: 15793683 # Func_class: H Coenzyme transport and metabolism # Function: 6-pyruvoyl-tetrahydropterin synthase # Organism: Neisseria meningitidis Z2491 # 1 140 1 140 140 272 92.0 1e-73 MKITKIFTFDSSHMLDGHDGKCQNLHGHTYKLEITVSDDPVRGGPKDGMVMDFTDLKAIV KQHITDPFDHAFIYNGGNERECQIATLLEGWNMKTLCLPCRTTAENMAVEMYDRLKNAGL KVCSVKLWETPTSCAEYEGE >gi|257257256|gb|ACDX02000003.1| GENE 28 34937 - 35452 570 171 aa, chain - ## HITS:1 COG:no KEGG:NMC0465 NR:ns ## KEGG: NMC0465 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 171 1 171 171 305 85.0 7e-82 MPKLYMFYLGGNAGRSNIEVHDIQFAVCDDYREAIPALKAAWFGDADKIHIDGWQIVEWA DGYDVDVSDHAEPQGSSENVPHLYFVNVGGYRAGQLAEAHAFGLFVAVTPAEAKQKALRT LLTDHVQQHKDNLKDVDNLLRLDRIGKHTIRLTPNPHGKPAEIGFQGYLPI >gi|257257256|gb|ACDX02000003.1| GENE 29 35590 - 36249 1012 219 aa, chain - ## HITS:1 COG:NMA0702 KEGG:ns NR:ns ## COG: NMA0702 COG0603 # Protein_GI_number: 15793681 # Func_class: R General function prediction only # Function: Predicted PP-loop superfamily ATPase # Organism: Neisseria meningitidis Z2491 # 1 219 1 219 219 428 93.0 1e-120 MQHPQALVIFSGGQDSTTCLIQAIQTYGRENVQAITFQYGQRHAVELERARWIAQDLGVK QTVLDLSLMQQITHNALMDDTAAIETASDGLPNTFVDGRNALFLLYAAIYAKGQGIRHII AGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYAFQIHTPLMYLTKAQTWALADKMGALDY IREQTHTCYNGIVGGCHECPSCVLRERGLAEYLESKRVV >gi|257257256|gb|ACDX02000003.1| GENE 30 36412 - 37050 1189 212 aa, chain - ## HITS:1 COG:NMA1611 KEGG:ns NR:ns ## COG: NMA1611 COG0800 # Protein_GI_number: 15794505 # Func_class: G Carbohydrate transport and metabolism # Function: 2-keto-3-deoxy-6-phosphogluconate aldolase # Organism: Neisseria meningitidis Z2491 # 1 212 1 212 212 369 97.0 1e-102 MSKLTPREILSAGAVVPVMAIDDLSTAVDLSHALVEGGIPTLEITLRTPVGLDAIRLIAK EVPNAIVGAGTVTNPEQLKAVEDAGAVFAISPGLHESLAKASHNSGIPLIPGVATPGEVQ LALEHGIDTLKLFPAEVVGGKAMLKALYGPYADVRFCPTGGISLATAPDYLALPNVLCVG GSWLTPKEAVKNKDWDTITRLAKEAAALKPKA >gi|257257256|gb|ACDX02000003.1| GENE 31 37426 - 39261 2776 611 aa, chain - ## HITS:1 COG:NMB1393 KEGG:ns NR:ns ## COG: NMB1393 COG0129 # Protein_GI_number: 15677254 # Func_class: E Amino acid transport and metabolism; G Carbohydrate transport and metabolism # Function: Dihydroxyacid dehydratase/phosphogluconate dehydratase # Organism: Neisseria meningitidis MC58 # 1 611 1 611 611 1212 97.0 0 MNPTPIHPKLAEITERIIERSRPTREKYLAKIRSAKQMGRLERNQLGCSNLAHGYAAMPK SIKIEMLQDTVPNLGIITAYNDMVSAHQPFKDFPDQIKDEAQKNGATAQVAGGTPAMCDG ITQGYAGMELSLFSRDVIAMSTAVGLSHQMFDGSLFMGVCDKIVPGLMIGALSFGHIPGI FVPAGPMSSGIGNKEKARTRQLFAEGKVGRDALLESEMGSYHSPGTCTFYGTANSNQMMM EMMGVHLPAAAFVHPYTDLREALTRYAAGHLARGIKNGTIKPLGEMLTEKSFINALIGLM ATGGSTNHTMHLVAMARAAGVILNWDDFDEISSIIPLLIRVYPNGKADVNHFTAAGGLPF VIRELLDAGLLHDDVDTVVGHGMRHYTKEPFLIDGKLEWREAPETSGNDDILRKADNPFS PDGGLRLMKGNIGRGVIKVSAVREGCRIIEAPAIVFNDQREVLAAFERGELERDFVCVVR YQGPRANGMPELHKLTPPLGILQDRGFKVALLTDGRMSGASGKVPASIHMTPEALMGGNI AKIRTGDLIRFDSVTGELNVLINEAEWNAREVERIDLSANQQGCGRELFANFRSMTSSAE TGAMSFGGEFA >gi|257257256|gb|ACDX02000003.1| GENE 32 39725 - 41170 2101 481 aa, chain + ## HITS:1 COG:NMB1392 KEGG:ns NR:ns ## COG: NMB1392 COG0364 # Protein_GI_number: 15677253 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-phosphate 1-dehydrogenase # Organism: Neisseria meningitidis MC58 # 1 481 1 481 481 900 91.0 0 MSTQTNFDLVLFGATGDLAMRKLLPCLYQAHVAGLLNPQGRILGVSRSDLDTAGFLAKVE TNSKIHVKQNFSDDAWASFVKRIEYLKVDVTEEADFAALGETVKARKETDNVIIYLSTAP KFFAQACENLAKVGLNADNARVVLEKPLGTDLASSQQINTDVARYFKESQIYRIDHYLGK ESLQNLLALRFANVMFEPLWNNKYIESVQLTIAEQLGVEERGEFYDITGALRDMVQNHLM QMLCMTAMEAPASLDADAVRDEKVKVIKSLKPLTIESVNENVVRGQYTAAKGMNGYLQEI NVPQDSFTETYVAIKAEIENDRWKGVPFYLRTGKRMAGKVAEIVLNFRPLQNHIFENSQA APNRLVIELQPTESVRLYTQMKAPGAGNKVEIVPLAADLEKVLEGRRAEAYERLLLDVIN GKLALFNRRDELEAAWEYVMPILENWASNTTPPHGYDAHSWGPEAARELLARDGHKWHED Q >gi|257257256|gb|ACDX02000003.1| GENE 33 41387 - 42082 942 231 aa, chain + ## HITS:1 COG:NMA1608 KEGG:ns NR:ns ## COG: NMA1608 COG0363 # Protein_GI_number: 15794502 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase # Organism: Neisseria meningitidis Z2491 # 1 230 1 230 231 343 76.0 2e-94 MFVWHEYENAAAASEALADAVAAALQNALDNKGSAVLAVSGGRSPIPFFQALSQKDLDWQ KIGITLVDERIVPTTHADSNTALAHEYLLQNKASAATWIPVVEAGKTETELQPDSVVAYA LKHYKQPDVLILGMGGDGHTASLFPKAPQLKAAINESDDPTLIHTTPVTAPHERVSMTLG AIAKTENVFLAIQGAEKKAVFDKAAARADLEYPTSLVLNHQGVNCHVFYSN >gi|257257256|gb|ACDX02000003.1| GENE 34 42063 - 43064 1546 333 aa, chain + ## HITS:1 COG:NMA1607 KEGG:ns NR:ns ## COG: NMA1607 COG0837 # Protein_GI_number: 15794501 # Func_class: G Carbohydrate transport and metabolism # Function: Glucokinase # Organism: Neisseria meningitidis Z2491 # 16 333 11 328 328 573 90.0 1e-163 MSSTQTDIQQPVGKNYPRLVADIGGTNARFALETAPQQIEKAQVLPCKDYDTIVDAAKAY LEQAGGAEVRHAAFAIANPILGDWVQMTNHHWAFSIETTRQALELDTLILLNDFTAQALA VTQTSSKDLMQVGGHKPIEFAPKAVIGPGTGLGVSGLVHSPAGWVALAGEGGHSSFPPFD DMEVLIWQYAKNKYGHVSAERFLSGAGLSLIYEALAKRDKLKNYRLKPSEITEKALSGTS PLCRQTLDIFCAMLGTVASNLALTLGARGGVYLCGGIIPRVLEYFKTSPFRSRFENKGRF EAYLAAIPVYVVLSEFPGITGAAAALDNHLKNV >gi|257257256|gb|ACDX02000003.1| GENE 35 43114 - 43962 1463 282 aa, chain + ## HITS:1 COG:NMA1605 KEGG:ns NR:ns ## COG: NMA1605 COG1737 # Protein_GI_number: 15794500 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Neisseria meningitidis Z2491 # 1 282 1 282 282 503 96.0 1e-142 MLSKISESLSNLSGAERKVAECALAEPKWFVHAAVAEIAERASVSQPTVIRFCRSLGYKG LPEFKLALSASIGHEGMPYVHEELNTDDDMSVVVEKVLGNAAASILGERRFLKESELENA IATLMHARRVEFYGVGNSGIVAQDAQHKFFRFGISTVSYVDTHTQLMAASVLTDQDVLVA ISNTGSSIELLDAVSIAKENGAAVIALTRNDSPLAQLADCVLSIATQENAELYTPMVSRL LQLAVIDILAIGLALRLGDAASLQLQKSKKSIHNKHVDYDKD >gi|257257256|gb|ACDX02000003.1| GENE 36 44153 - 45796 2755 547 aa, chain + ## HITS:1 COG:NMB1388 KEGG:ns NR:ns ## COG: NMB1388 COG0166 # Protein_GI_number: 15677249 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-phosphate isomerase # Organism: Neisseria meningitidis MC58 # 1 547 1 547 548 1070 94.0 0 MKHLHDLPAWSKLWIHFDETKEQHMREMFEQDPQRAERYWLQVGGLTLDYSKNRITDETM SLLTELAREAGVPERMQQMFRGEKINTTENRAVLHVALRNRTNSPIIVDGEDVMPKVNRV LQRMGEFAHEVRSGNWLGYTNQVITDVVNIGIGGSDLGPLMMCTALKPFGHPRLKMHFVS NVDGSQLRDVLSKVHPETTLFIIASKTFTTQETLTNALTARKWFLDHAGDETAVAKHFVA VSTNQKAVAEFGIDTANMFEFWDWVGGRYSLWSAIGLPIMLYLGEENFIEMLNGAHLMDQ HFINTPLERNLPVILALVGIWYINYYGGGSHVIAPYDQHLHRLPKFIQQLDMESNGKQVT LDGKSIGYETSPIIWGETGINGQHAFFQLLHQGTHITPIDLIASLEKRSNLRGHHEILLA NVFAQAEAFMRGKTPDEVRAELKAQGMEEARIEELVPHKTFSGNRPTNLILMNKVNPRNM GSLIAMYEHKTFVQGIIWGINSFDQWGVELGKQLAKTILAELTGETGVQKHDSSTTRLIN LYLNANK >gi|257257256|gb|ACDX02000003.1| GENE 37 46191 - 46784 426 197 aa, chain - ## HITS:1 COG:NMA0903 KEGG:ns NR:ns ## COG: NMA0903 COG3663 # Protein_GI_number: 15793869 # Func_class: L Replication, recombination and repair # Function: G:T/U mismatch-specific DNA glycosylase # Organism: Neisseria meningitidis Z2491 # 5 196 35 226 231 368 93.0 1e-102 MSAPLEIETHPFPALLPPQATVMMMGTFPPKEDKRAMQFHYPNFQNDMWRVYGLVFFNDA AHFQMPSEKAFDAEKIKAFLRERGIASCPTVLKAVREHGNASDKFLQVVETVDLAAVLAQ MPDCRHICTTGGKATEILLDIQGGGIKMPKTGETVPFPFAGRDLTLTRLPSTSRAYPLSL AKKAAAYRAFFEMAGLV >gi|257257256|gb|ACDX02000003.1| GENE 38 46838 - 47740 817 300 aa, chain - ## HITS:1 COG:BS_yyaM KEGG:ns NR:ns ## COG: BS_yyaM COG0697 # Protein_GI_number: 16081133 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Bacillus subtilis # 1 290 1 285 305 109 27.0 8e-24 MERYSVHLKLLGMAVLWGASWPMGRMLGQSLPPLTGGAVRFVLASVLLLGWLFARSRFAT LAALSARQWLGLTAAASVGVCGYAVFFMLGLQAMPAGKAAVVVAVNPVLTLLLAAWLFGE RLNAKILVGMLLAVCGAITAVTQGQPLTVLSGGIKAGEWLIFGCVVCWAAYTLIGRAVLR GIDALTVTAATSFIGALMLSVVALWTDGLPFDAMAAMDARGWTALAWLVIGATVLAYAWY FEGVKTLGAGSAAAYITLVPIFGMLSSAWVLGEPLHISLVAGCAAAVGGMTLMRYGQKVV >gi|257257256|gb|ACDX02000003.1| GENE 39 47789 - 48406 649 205 aa, chain - ## HITS:1 COG:NMA0890 KEGG:ns NR:ns ## COG: NMA0890 COG0135 # Protein_GI_number: 15793859 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosylanthranilate isomerase # Organism: Neisseria meningitidis Z2491 # 2 202 3 203 208 285 70.0 5e-77 MKIRTKICGITRPEDALAAAEAGADAVGLVFYAKSKRAVTSAQAKEIVAVLPPFVSAVAL FVNETAENIREILRQVPIDVIQFHGDEDDDFCRQFDRPYLKAVRVQSAADIQTACAKFPN ARALLFDAYHPTEYGGTGQSFDWTLLRGNIGKPWILAGGLTPENVADAVKTSGAAAVDVS GGVESSAGIKDKKKIAAFVAAAKVV >gi|257257256|gb|ACDX02000003.1| GENE 40 48758 - 48916 105 52 aa, chain + ## HITS:1 COG:no KEGG:NMB1480 NR:ns ## KEGG: NMB1480 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis # Pathway: not_defined # 5 52 7 53 53 76 85.0 3e-13 MTEPKNTQPSLPEDERKNPVYRLGQAVAGFMLVVWAGVLALVFYLVFRFWFS >gi|257257256|gb|ACDX02000003.1| GENE 41 49172 - 50089 806 305 aa, chain + ## HITS:1 COG:no KEGG:Alvin_2718 NR:ns ## KEGG: Alvin_2718 # Name: not_defined # Def: hypothetical protein # Organism: A.vinosum # Pathway: not_defined # 15 297 108 351 352 74 26.0 6e-12 METLQPSQHPITPQNSVNEPKRLRAGEGVSWFTDSWRIFSKNKFKWMGAIILVSLIPLFV GFLFGLLGIESPPADFNDFTSTIIIRELLFNLFFYWVGFCFLGGIVLLAAQTAQGKNFNF GSLFAGFSIKKSGAFLILLLLSIVVCLLLALAVVIPFGIFANGNFLRADFMPAFPILFII LLVIIAIYSMMFWLAPAFVMLEDMNPVAAIKASFNACRRNIPALLVYGLIWLGIGIAFWF IFMIVIVSAFATEASIQQATALSGPVFILFFIFLVITYLVLYPVAMIGIYTAYRSIFPQG RLNKY >gi|257257256|gb|ACDX02000003.1| GENE 42 50345 - 51604 1859 419 aa, chain + ## HITS:1 COG:NMB0617 KEGG:ns NR:ns ## COG: NMB0617 COG1158 # Protein_GI_number: 15676520 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Neisseria meningitidis MC58 # 1 419 1 419 419 801 95.0 0 MHVSELQTLHISKLLEMAEEHGIENANRFRKQDLVFAIVRQMMKQGESFTCSGTLEILPD GFGFLRSADTSYLAGPDDIYVSPTQIRRFNLHTGDTIEGSVRVPKDNERYFALVRLDSIN GDHPEVCKHKILFENLTPLFPTKQFKLERDIKAEENLTGRAIDLVSPIGRGQRALLVAPP KTGKTVMLQNIAHAITANYPDVELIVLLIDERPEEVTEMSRSVRGEVVSSTFDEPAQRHV QVAEMVIEKAKRMVEHKKDVVILLDSITRLARAYNTVVPTSGKILTGGVDANALHRPKRF FGAARNVEEGGSLTIIATALVETGSRMDDVIYEEFKGTGNMELHLDRRMAEKRLFPAINI NKSGTRREELLVPNDQLQRMWLLRKFLHPMDEIEATEFLVGKLKDSKNNDDFFELMRGK >gi|257257256|gb|ACDX02000003.1| GENE 43 51703 - 52101 579 132 aa, chain + ## HITS:1 COG:NMB1619 KEGG:ns NR:ns ## COG: NMB1619 COG0537 # Protein_GI_number: 15677469 # Func_class: F Nucleotide transport and metabolism; G Carbohydrate transport and metabolism; R General function prediction only # Function: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases # Organism: Neisseria meningitidis MC58 # 3 131 6 134 134 229 86.0 1e-60 MTCPICTADNEDILLQTPNLRVIAVHNEASAPAFCRVIWNDHIAEMTDLSAAERAEIMEM VYKVEAAMRQVFRPAKINLASLGNVVPHLHWHVIARFENDANFPAPIWAAPVREHGMTLP DNWTEQVKALLA >gi|257257256|gb|ACDX02000003.1| GENE 44 52204 - 53394 1776 396 aa, chain + ## HITS:1 COG:NMA1819 KEGG:ns NR:ns ## COG: NMA1819 COG1619 # Protein_GI_number: 15794709 # Func_class: V Defense mechanisms # Function: Uncharacterized proteins, homologs of microcin C7 resistance protein MccF # Organism: Neisseria meningitidis Z2491 # 1 392 1 394 394 564 73.0 1e-161 MTWQTSRRHFLRACSAAAGAGLLQACGTGTTVTPSTQTGNTAKAQPVQPKTSHPPRSGDN LLRVVAPSGFAEDPNRVNAGLTRLYNAGFTVTNQQAGSRRYQRFAGTDAQRVSDFQEVAT GRVETPKVLMGLRGGYGAARILPQIDFTSLGARMRERGTLFFGFSDVCAVQLALLAKGNM VSFAGPMVYSEFGKPEPSVFTMDSFIRGTTNNVNIIDVPAIQRANVNVEGTLWGGNLSVL ASLAGSPYMPDIQGGILFVEDVSEQPYRIERMLNTLYLAGILQKQRAIIFGDFRMGTIRD VYDSSYDFSAVVNHVSRTAKVPVLTGFPFGHITNKSTFPLGAHAKIHSTANGGYTVTFSG YPTLNPAALTLNNLLPPPMPTFDSSTYSPIVEEITE >gi|257257256|gb|ACDX02000003.1| GENE 45 53557 - 55152 2328 531 aa, chain + ## HITS:1 COG:NMB0626 KEGG:ns NR:ns ## COG: NMB0626 COG4108 # Protein_GI_number: 15676528 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptide chain release factor RF-3 # Organism: Neisseria meningitidis MC58 # 1 531 1 531 531 1085 99.0 0 MSQEILDQVRRRRTFAIISHPDAGKTTLTEKLLLFSGAIQSAGTVKGKKTGKFATSDWME IEKQRGISVASSVMQFDYKDHTVNLLDTPGHQDFSEDTYRVLTAVDSALMVIDAAKGVEA QTIKLLNVCRLRNTPIVTFMNKYDREVRDSLELLDEVENILKIRCAPVTWPIGMGKNFKG VYHILNDEIYLFEAGGERLPHEFDIIKGIDNPELEQRFPLEIQQLRDEIELVQAASNEFN LDEFLAGELTPVFFGSAINNFGIQEILNSLIDWAPAPKPRDATVRMVEPDEPKFSGFIFK IQANMDPKHRDRIAFLRVCSGKFERGMKMKHLRINREIAASSVVTFMSHDRELVEEAYAG DIIGIPNHGNIQIGDSFSEGEQLAFTGIPFFAPELFRSVRIKNPLKIKQLQKGLQQLGEE GAVQVFKPMSGADLILGAVGVLQFEVVTSRLANEYGVEAVFDNASIWSARWVSCDDKKKL AEFEKANAGNLAIDAGGNLAYLAPNRVNLGLTQERWPDIVFHETREHSVKL >gi|257257256|gb|ACDX02000003.1| GENE 46 55213 - 55734 486 173 aa, chain - ## HITS:1 COG:NMA0944 KEGG:ns NR:ns ## COG: NMA0944 COG3161 # Protein_GI_number: 15793902 # Func_class: H Coenzyme transport and metabolism # Function: 4-hydroxybenzoate synthetase (chorismate lyase) # Organism: Neisseria meningitidis Z2491 # 7 172 8 157 158 124 45.0 1e-28 MNPPLNWQDKLPEELPQGWNERAAALCQAQSLTAALRALGGSFMVKVLYMGELDGQGNLF GENHAEIAAPQFVRDVLLHLDGVPVVQARSACSLQSQAWRGVLDCGTQPLGERLFDGTLP LKRSAFEFCLMENVGGQDDFRRPVAARRSYFDWDGEVLELTEYFLPGLARIVR >gi|257257256|gb|ACDX02000003.1| GENE 47 55762 - 56430 950 222 aa, chain - ## HITS:1 COG:NMB0733 KEGG:ns NR:ns ## COG: NMB0733 COG0132 # Protein_GI_number: 15676631 # Func_class: H Coenzyme transport and metabolism # Function: Dethiobiotin synthetase # Organism: Neisseria meningitidis MC58 # 1 213 1 213 215 387 91.0 1e-108 MKGVYFVSGIDTDIGKTVATGMLAKQLLQQGKSVITQKPVQTGCQNIADDIAVHRNIMGI PMQEADKQRLTMPEIFSYPASPHLAARLDGRALDLHKIRAATQELAAQYEIVLVEGAGGL MVPLTENLLTIDYIQQQAYPVILVTSGRLGSINHTLLSFAALKQYGISLHSLIFNHIHDS RDKHIAQDSLAYLKGRLKTDFPDAEWMELDKVETDERSSEND >gi|257257256|gb|ACDX02000003.1| GENE 48 56427 - 57719 966 430 aa, chain - ## HITS:1 COG:NMB0732 KEGG:ns NR:ns ## COG: NMB0732 COG0161 # Protein_GI_number: 15676630 # Func_class: H Coenzyme transport and metabolism # Function: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase # Organism: Neisseria meningitidis MC58 # 6 430 9 433 433 860 94.0 0 MISKNSSLLDFDRAHLLHPYTSMTDPLPVYPVRRAEGVHIELADGTRLIDGMSSWWCAIH GYNHPVLNQAVEAQIKQISHVMFGGLTHEPAVELGKLLVGILPQGLDRIFYADSGSVSVE VALKMAVQYQQARGLTAKQNIATVRRGYHGDTWNAMSVCDPETGMHHIFGSALPQRYFVD NPKSRFDDEWDEADLQPVRALFEAHHADIAAFILEPVVQGAGGMYFYHSQYLRGLRDLCD EFDIVLIFDEIATGFGRTSKMFACEHANVVPDIMCIGKGLSGGYMTLAAAITSQKVTETI SRGEAGVFMHGPTFMANPLACAVACASVKLLLSQDWQANIRRIESILKGRLKTAWDIRGV KDVRVLGAIGVIELEKGVDMARFQADCVAQGIWVRPFGRLVYLMPPYIISDDLLTELADK TIQILKEHNK >gi|257257256|gb|ACDX02000003.1| GENE 49 57914 - 59908 1638 664 aa, chain + ## HITS:1 COG:NMB1297 KEGG:ns NR:ns ## COG: NMB1297 COG0741 # Protein_GI_number: 15677164 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Neisseria meningitidis MC58 # 1 639 1 609 658 613 55.0 1e-175 MAKLKTIALTLSGLSAVSGAAAAQNATPNQTGMAMMRLNSALLDQAKAKTFGSGSLWASL KKDFRMGEVNSELVRRHESKFAANGAYFDRTITRSKPYMYHIATEVKKRNMPAEIALLPF IESAFVTKAKSHVGASGLWQFMPATGRHFGLEKTPLYDGRHDVYAATDAALNYLQYLHGL FNDWSLALAAYNWGEGNVGRAVNRARAQGLEPTYENLRMPNETRNYVPKLLAVRNIVASP QTFGMNISEITNQPYFQTVSIDKPIDNSTIARLANISESELLTLNPAFNAPVFIPKNNRK LLLPVSAVSAFEKNYRNANPETLLSFNAYTSARNTNLNKIATEAGMSVAEIKRLNGLNGN SLSEGRTILVAQNNTATKQDMINFIDTDNTPDTYRSNMPTMAPIQTAKLKTDTVKTVVIP ANTVAQEQAPATFDFVTNTKAATAPIAVDTVTTAQPRVERVQTVQSTEAKPAADTTVIAA AELAQPAFTLTEPQVVASAKSATPPTPSAVEEPDQMMTLLANVDSRLQKAEEDQTTVAQN ITHHQEVDATKARSERIAENIAKYQSRTEARLARANNQSSAQPTTMAGMHRVADGDTLFN ISKRYNLSVADLIVANNIKGSNIRKGQLLRVSAAPVKTRKTTFKMFLIQSAEAIRSIRLP TALT >gi|257257256|gb|ACDX02000003.1| GENE 50 60273 - 61691 550 472 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 [Campylobacter concisus 13826] # 16 461 11 457 460 216 32 5e-55 MNKKTFKTVLSTVAAAVALSACTMIPKYEQPQVEVAETFKYDTFDDGIRAADLGWQDFFA DLRLHRLIDIALERNTDLRTAALNAEIYRKQYMIARNDLLPSINASGTGTRVGSLSGGVT RSEYSVGLGAAAYELDLFGRVRSNSQAALQGYFSVAANRDAAHLALIAAVAKAHFNELYA QESMALAQRVLKTRETTYKLSQMRHKAGVISAVDLRQQEALIESAKADYANAVKNREQAR NALATLINQPLPEDLPAALPLSKQFKITRLPAGLSSEVLLNRPDIRAAEHSLKQANANIG AARAAFFPTISLTGSVGTASGELSGLFKSGTGIWSFAPSITLPIFNWGTNKANLDVATLR KEAQIVTYEAAVQSAFQDVSNAFVAREQLDKSYAALSKQSRAYNDSLRLISLRYKHGVSN ALDLLDAERSSYGAETALLANQLTRLENLADLYKALGGGLKRETVSQSAAQQ >gi|257257256|gb|ACDX02000003.1| GENE 51 61750 - 64965 3763 1071 aa, chain - ## HITS:1 COG:NMA1969 KEGG:ns NR:ns ## COG: NMA1969 COG0841 # Protein_GI_number: 15794852 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Neisseria meningitidis Z2491 # 1 1064 1 1064 1067 1757 88.0 0 MAKFFIDRPIFAWVIAIFIIAAGIIGIRSLPVSQYPSVAAPTITLTATYPGASAQVMEDS VLAVIERNMYGVEGLDYMTTSANSSGSGSVSLTFTPETNEDLAQVDVQNKLSEVLSTLPS TVQQYGVTVSKARSNFLQVVMLSSEKQSIEEMNDYAQRNIVPELQRIDGVGQVRLFGAQR AMRIWVDPKKLQNYNLSFATVTNALTAQNIQISAGSIGSLPAVEGQTISATVTAQGQLST AEEFGNIILVSNTDGSNVYLKDVAKVSLGMQDYSSSTRLNGVNTTGMAVMLSNSGNALAT ATAVKEKMAVLQKYFPDGMSWKIPYDTSKFVDISIEKVIHTLLEAIVLVFLVMFLFLQNI RYTLIPTIVVPISLLGGFAFISYMGMSINVLTMFAMVLVIGIVVDDAIVVVENVERIMAT EGLPPKAATKKAMGQISGAVIGITAVLMSVFVPLAMFSGATGNIYKQFALTMAASIGFSA FLALTLTPALCATMLKPIQKGHHEEKKGFFGWFNKKFDSWTHGYEGWVAKVLRKALRMMV VYIGLAAVGVFLFMRLPTSFLPTEDQGNLMLSVQLPAGATKERTDATLAQITQLAKSVPE VENIITVSGFSFAGSGQNMALGFVILKDWSERTATGSDATSIAGKLTGMMMGTLKDGFGL AIVPPAIMELGTGSGLSIYLQDRNNSGHAALLAKRNELIQKMRTSGLFDPSTVRASGLED APQLKIDINRAAAAAQGISFSDIRTALASALGSSYVNDFPNQGRLQRVMVQADASARMQP SDILNLPVPNSSGAAVPLSTIATVSWQTGMEQSVRFNGYPAMELSGSPATGVSSGQAMAA VQQMVDEMGGGYSLEWGGQSREEAKGSSQTVMLYALAAAAVFLVLAALYESWSIPLAVIL VIPLGLIGAALGVTGRNMFEALLGSIPAYANDIYFQVGFVTVMGLSAKNAILIIEFAKDL QAQGKSAIEAALAAAHLRFRPIIMTSFAFILGVVPLYVASGASSASQRAIGTTVFWGMLI GTILSVFLVPLFYVIVRKFFKETPHEHEMAVKHAAEAGMISLEDQNTDNKH >gi|257257256|gb|ACDX02000003.1| GENE 52 64977 - 66254 1382 425 aa, chain - ## HITS:1 COG:NMA1970 KEGG:ns NR:ns ## COG: NMA1970 COG0845 # Protein_GI_number: 15794853 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Neisseria meningitidis Z2491 # 1 425 1 412 412 542 79.0 1e-154 MTFYASKVKSMTAIAAAIALALSACGKGGDTAKGEAGGAGQQAAAQQAPAPVVGVVTVHP ETIALTTELPGRLESLRTADVRAQVGGIIQKRLFQEGSYVRAGQPLYQIDSSTYEANLES SRAQLASAQATLAKANADLARYKPLVAADAISKQDYDAAVTAKRSAEASVKAAQAAIKSA GINLNRARITAPISGFIGQSKVSEGTLLNAGDTTVLATIRQTNPMYVNITQSATEVMKLR QQVAEGKLSGVDGAIEVGIKFDNGEVYPYKGRLLFSDPSVNETTGQITLRASVPNDKNIL MPGLYVRVLMEQVAVANAFVVPQQAVTRGTKDTVTIVNAKGEMESREVTVAQQQGTNWII TAGLNDGDKVVVDGTSIAGMMGAKKVTPKEWMPAGSEAEAAPKAASEAKKDVQTTSEAKS ASAAK >gi|257257256|gb|ACDX02000003.1| GENE 53 66534 - 67124 727 196 aa, chain + ## HITS:1 COG:NMB1717 KEGG:ns NR:ns ## COG: NMB1717 COG1309 # Protein_GI_number: 15677564 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Neisseria meningitidis MC58 # 1 195 16 210 210 301 75.0 6e-82 MLAALETFYQKGIARTSLNEIAQAAGVTRGALYWHFKNKEDLFDALFQRICDDIENCMQQ DAENSQEQEWPLFRRTLMRFFTRLQTNDIHYKFHSILFLKCEHTEQNAAVIDIAAKHQAI WREKITEVLTKSIAQHALSEDLDTDMAVIFIKSTLDGLIWRWLASDKNFDLAQTAPRVID ILLDNLKNHPQLRKQK >gi|257257256|gb|ACDX02000003.1| GENE 54 67397 - 70000 3320 867 aa, chain - ## HITS:1 COG:NMB1416 KEGG:ns NR:ns ## COG: NMB1416 COG0308 # Protein_GI_number: 15677275 # Func_class: E Amino acid transport and metabolism # Function: Aminopeptidase N # Organism: Neisseria meningitidis MC58 # 1 867 1 867 867 1712 97.0 0 MSKTVHYLKDYQTPAYRILETDLHFDIAEPQTVVKSRLTVEPQRVGEPLVLDGSAKLLSV KINGTAADYVLKGETLTIADVPSERFTVEVETEILPAENKSLMGLYASGGNLFTQCEPEG FRKITFYIDRPDVMSKFTTTIVADKKRYPVLLSNGNKIDGGEFSDGRHWVKWEDPFAKPS YLFALVAGDLAVTEDRFTTMSGRNVKIEFYTTEVDKPKVGFAVESLKNAMKWDETRFGLE YDLDIFMVVAVGDFNMGAMENKGLNIFNTKFVLADSLTATDTDFEGIESVVGHEYFHNWT GNRVTCRDWFQLSLKEGLTVFRDQEFSGDRASRAVRRIENIRLLRQHQFPEDAGPTAHPV RPASYEEMNNFYTMTVYEKGAEVVRMYHTLLGEEGFQKGMKLYFQRHDGQAVTCDDFRAA MADANGINLDQFALWYSQAGTPVLEAEGRLKNNVFELTIKQTVPPTPDMADKQPMMIPVK IGLLNRNGEAVAFDYQGKRATEAVLLLTEAEQTFLLEGVTEAVVPSLLRGFSAPVHLNYP YSDDDLLLLLAHDSDAFTRWEAAQTLYRRAVAANLAALSDGVELPKHEKLLAAVEKVISD DLLDNAFKALLLGVPSEAELWDGAENIDPLRYHQAREALLDTLAVRFLPKWHELNRQAAK QEHQSYEYSPEAAGWRTLRNVCRAFVLRADPAHIETVAEKYGEMAQNMTHEWGILSAVNG NESDTRNRLLAQFADKFSDDALVMDKYFALVGSSRRSDTLQQVQTALQHPKFSLENPNKA RSLIGSFSRNVPHFHAEDGSGYRFIADKVIEIDRFNPQVAARLVQAFNLCNKLEPHRKNL VKQELQRIRAQEGLSKDVGEIVGKILD >gi|257257256|gb|ACDX02000003.1| GENE 55 70591 - 72234 2380 547 aa, chain - ## HITS:1 COG:STM3692 KEGG:ns NR:ns ## COG: STM3692 COG1620 # Protein_GI_number: 16766977 # Func_class: C Energy production and conversion # Function: L-lactate permease # Organism: Salmonella typhimurium LT2 # 1 542 1 550 551 622 65.0 1e-178 METWIQNYTAVGGSLYLTAAVALLPIIFFFVALTVLKLKGYQAGLYTLLIALGVAIFGFG MPAGMAVSSALYGFAYGLWPIAWIIVTAVFLYKITVKTGQFDIIRASVISITEDQRLQML LVGFSFGAFLEGAAGFGAPVAITAALLVGLGFNPLYAAGLCLIANTAPVAFGAMGIPILV AGQVSNLDPYHIGQVAGRQLPILSIIVPFWLVAMMDGMRGIRQTWPAVLVAGVSFAVTQF ITANFIGPELPDVTSALVSLVCLSAFLKKWQPEEIFTFNGMKKPSERKAGEYTAAQIIKA WSPFAILTVFVSVWTIKGVKEALGVATIKFDWPMLHNLVQKAAPIVSEPAPYAAVFKIDF LGAVGTAILLSAIVSAVLLKMKPSEAVGTFFETLKELRLSILSIGLVLGFAFVANYSGLS STLALVLAATGAVFPFFSPFLGWLGVFLTGSDTSANALFGSLQASTAHQIGVVPELTVAA NTTGGVTGKMISPQSIAIACAAVGLEGKESNLFRFTVKHSLIFCTFAGLMTLLQAYVLPW TLIFFNK >gi|257257256|gb|ACDX02000003.1| GENE 56 72630 - 73406 930 258 aa, chain + ## HITS:1 COG:NMB1711 KEGG:ns NR:ns ## COG: NMB1711 COG2186 # Protein_GI_number: 15677558 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Neisseria meningitidis MC58 # 3 258 2 257 259 445 85.0 1e-125 MTKLVRPQKISDQILSILEERIATGVYEEGGKIPPERTLAEEFGVSRPSVRVALNILIAR QVLEARQGDGYYVSIKPQQDFLQSWQELLGKHTNWETDVFDFSCHIEGCMASLAAERRTD ADLKRIDFWRQKFESACESGHLEHQSEADVSFHQTIADAAHNILFSHLSGGLLKMLYRQT RSSIIYFNQTEDPRPKLIAQHRAIYEAILERRPADAAEAAKIHLNYVANSILQNREYKSR NEHADTLAQNDLKRAQDW >gi|257257256|gb|ACDX02000003.1| GENE 57 73853 - 75571 2473 572 aa, chain - ## HITS:1 COG:PM0041 KEGG:ns NR:ns ## COG: PM0041 COG4178 # Protein_GI_number: 15601906 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease and ATPase components # Organism: Pasteurella multocida # 6 564 12 559 564 419 40.0 1e-117 MNILKKFFRLARPFWTGAHGRIQWLMLAVLIGFTLCSITISVWIAAWDKRFYDALAAFDG ASMPALIVEYLGYMAMIIGCIVCGDWLQKRLIFRWRTHLTEQFQQNWLEGHKHYRLRLTG EPDNPDQRIAEDIYLLADKSIGLFRSFINNIAKFSAFVAVLWTLSGVQTFNIGGRDITIH GYLVWVALIYSVISTLIAHLVGRKLKNLNIDRQHREADYRAALLRVRDHAEQIAFYNGGE AETGRLKQRYLRIRDNWRRLTNCEFRQETFWATYVRISIFIPILATLPMYLAKTMTFGDM MQTRTSFARVQDSFGWFTDSYRRLIEWAAVVERLSGFQTALEQVEQEGRSTARPTSASAP TLNNHRQDSILVLQNLTVHTQTGSPLLNDIDLEAHAPEWVLLEGRSGIGKSTLLRALAGL WPYYQGSFALDGSLLFLPQRPYLPADTLRHTVSYPHPACQDDRLIQTTLEQVGLDRLKDN LDEPYEWHSILSGGEQQRLSLARALLHKPQILFLDEATNQLDGESALTLMQVLKQNLPDT LVIGISHQPEIQALFGRKVNLRPFNELANRSD >gi|257257256|gb|ACDX02000003.1| GENE 58 75809 - 77287 1699 492 aa, chain - ## HITS:1 COG:NMA1662 KEGG:ns NR:ns ## COG: NMA1662 COG4773 # Protein_GI_number: 15794556 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid # Organism: Neisseria meningitidis Z2491 # 169 491 63 396 397 194 37.0 3e-49 MLTLSAMYHREKDVPSLFGLPANPDGSDLRLPRDSYLGANWNRADYKKANIFAEWKHYFG DRWNLTTSVDYRRNKSVTEYGYVPQRQNISPAGTLSDGYTGRSDRNNSQWTVQSDLEGKF DWFGREHEFYAGYEYTKEKFDNMWRGTPLEDGNYPVFSWTGDEIAKPDWNTARNLEIRKT VPDTHTATIATRLNIADKWHILLGTSYSRWRQSQYLSWMKTPDSHYKKGRFIPYAGITYD LTPQQNLYASYTSIFKYSGDYYDINDKLLPPVMGNSYEIGWKGAWNNNKLNSTLALFQTE KHNQPTDTWLGKDPATGNIRPWVRGDRAIYTPVRMESRGIDAEIAGNITDDWQIFAGYTF NKRRYTSTAAAQTAERNGRGVDFSQHTPRHIFRLNTMYRLPGAARKWTVGGGVNVQSKSS PIMVDGEKQYLGGYAVWHAAVQYEPSKHAKLSLKVDNLTDKRYYESYAHRATYQGHFYGQ PRNVTLNFKWKM >gi|257257256|gb|ACDX02000003.1| GENE 59 77281 - 78027 732 248 aa, chain - ## HITS:1 COG:NMA1663 KEGG:ns NR:ns ## COG: NMA1663 COG4773 # Protein_GI_number: 15794557 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid # Organism: Neisseria meningitidis Z2491 # 29 223 52 252 635 181 53.0 1e-45 MNHPIRYAYLLAAVPLQLSAQTTEQTEHVDLPTVNVTGQNRTASRDSYTVPVMSTATGLP ISPKDTPQSVSVITRKQMDDSGAATLEEALKTTTGLNIYKQGFQTRFQSRGFDIAQISED GVNSTVCTMCGNNPHDAKQLTDTALYDHIEVVRGATGLRKAQSEPGGSINAIRKRPTAAP LLEFDATADRFGTLRTSADVSGFLSRDNGLRGRAVAVLEKTKAGVKTATAIKGSFTALST SKSGKTIC >gi|257257256|gb|ACDX02000003.1| GENE 60 78224 - 80425 2047 733 aa, chain - ## HITS:1 COG:PA4168 KEGG:ns NR:ns ## COG: PA4168 COG4773 # Protein_GI_number: 15599363 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid # Organism: Pseudomonas aeruginosa # 51 733 128 802 802 321 32.0 3e-87 MNHSNKETLFKLSTLALCLAALPQAVYAAEEVQQVELNQVNVVGKNRSLRTENRNDYTTS AMSSTTGLALTPRETPQSVSVITKNQINDQGITTLADALKTTTGVNVVRQGNRTHFQSRG FYIEKLEEDGMATTIGAPGIFGSPARDGHNITDLAMYDHIEVVRGAAGLTQSNSAPGGTI NAVRKKPTAKKQISMNGLADRFGKRHIELDASGTLSSENQFRGRIVGSFDHDKTFQDKGK GQNSLLYGVLEKDIGENSKVSVGAYRIAQRNTPNLNGLPLWEDGSSLPRDSYFGADWNHG RFIKNGVFAEFDHYFNDNWKWNSKIDWRNSHSDQRYAFLMADKSGLKANQSIGIEDQQAF RYQHDSKHLHIQNNLRGKFEALGQTHDIFLTHNYSKERNTLHHTRMQAIGSYDPFSAVIP QPDWAAEPYSIMDSNNHFYTHALAAGTRINPTEKLHLLVGGRYTHWKRDFNYNWSRYAGA PDNDAKTYSVKNSKFIPYIGITYDFMPGQSLYASYTSIYKPTLKTNADNSYLAPEVGKNY ELGWKGEWMQSKLNTAVSLFQTDNTNVGVRVNVPASGNRKQTFYYVPAKERSRGVDAEIS GAIGANWKLFAGYTYNIRKTENHPNTEGDFANWTPKHIFRAYSSYTPPFANGKLSIGMGL SSQSKTGSKLPQGGYTVWNAGLQYRPTDNLQLGLAVNNLTDKRYYENNSNRTKNYGNFYG EPRNAVFSLKWKM >gi|257257256|gb|ACDX02000003.1| GENE 61 81139 - 81372 461 77 aa, chain + ## HITS:1 COG:NMB1826 KEGG:ns NR:ns ## COG: NMB1826 COG2501 # Protein_GI_number: 15677662 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis MC58 # 1 76 47 122 123 137 98.0 4e-33 MEATVYLEDNEYIALCDLLKLAGLAESGGQAKAFIAEGLVLRNGETETRKTAKIRGGEVI EFDGARLEIADGYDPEE >gi|257257256|gb|ACDX02000003.1| GENE 62 81350 - 81568 125 72 aa, chain + ## HITS:1 COG:no KEGG:NMA0634 NR:ns ## KEGG: NMA0634 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_A # Pathway: not_defined # 1 66 3 68 71 119 95.0 3e-26 MDTTLKNKAEALLGEPLLDEPVRPESWECCGSDCGDACIQTIYWTDKARYDAQRRKLKEA GWSEDEENGKVV >gi|257257256|gb|ACDX02000003.1| GENE 63 81860 - 82696 1280 278 aa, chain + ## HITS:1 COG:NMB1824 KEGG:ns NR:ns ## COG: NMB1824 COG0613 # Protein_GI_number: 15677660 # Func_class: R General function prediction only # Function: Predicted metal-dependent phosphoesterases (PHP family) # Organism: Neisseria meningitidis MC58 # 1 277 1 277 278 543 96.0 1e-154 MIDLHCHSTVSDGMLSPAEVVRLAHQNGCTLLALTDHDHTGGIAEARAEADKLGLRFVNG VEISVTWHGRTIHVVGLDFDEQDENLQNLLAQVRQGRLKRLEAIADKLEKKGIGGAYDGA LALAANKEMVSRTHIAEFLIQVGHVKNKQQAFTKYLGDGKSCAVRHEWVTLEDCVSAVNG AGGMAVIAHPMRYDLSATAKRNLFEEFKNLGGVGIEVHSGNCCKNDRLNYALLAERFGML SSAGSDFHRLNDFSGGILGACPELPENCKPVWEHFKRV >gi|257257256|gb|ACDX02000003.1| GENE 64 83383 - 84216 895 277 aa, chain + ## HITS:1 COG:NMB0981 KEGG:ns NR:ns ## COG: NMB0981 COG0560 # Protein_GI_number: 15676873 # Func_class: E Amino acid transport and metabolism # Function: Phosphoserine phosphatase # Organism: Neisseria meningitidis MC58 # 1 276 1 276 277 461 90.0 1e-130 MPHALVLQFPSAEALPSALLSRLPEPDYADEKRMRFIVEEGFSFNEVDAALLSSRQIDHA VLPDMAFGELGLIVSDMDSTLITIECVDEIAAGVGLKDRVAEITERSMRGELDFEQSLRS RVALLAGLDERVLAEVYENVLRLSPGAEFLLDECKAHGVKFMLVSGGFTFFTERLQQRLG FEYQHANVLEIENGKLTGRLKGRIIDAQAKADLLREYRSRLGLQPHQVLAMGDGANDIPM LKEAGISVAYRAKPKAQAVADACINFGGLERVRSWFK >gi|257257256|gb|ACDX02000003.1| GENE 65 84617 - 86590 2610 657 aa, chain + ## HITS:1 COG:PA3790 KEGG:ns NR:ns ## COG: PA3790 COG1629 # Protein_GI_number: 15598985 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Pseudomonas aeruginosa # 7 657 41 723 723 426 38.0 1e-119 MKHQLLLLPLALAVSQAWADTEPVPEETVTLSPVTVTGTQQEKANRVTFNPKAALQPLPA GDGADLLQSVPNMSIIRKGGSSGDPLFRGLGGSRLSINADDQFIYGGCAMRMDPPTAYIH PNSFDKVVVTKGPQTVTQGMGLVSGSVQFIRKDPDFSEKPYNINASLTAGSNDRRDGSLE AEFGGKYAYVRSNISHNEADDYKDGSGKSVHSHFKRDSQMLQLGITPTENTTIAGTYERS RAKVAYADRMMDGSKFDRDAWNVRFTQRNLTPWFSELELRYGESEIDHVMDTYSLRTIRN PAGKQIKNANNPKRNTDTGRLKATFDWDNLNLQTGVDYMDDVHVARMERGGDGYSHKPFM PNQSFKQWGVFTEAAWQQTDKQRWVAGLRHDRVKADYDSADVTDPALKHQKFNLNSGFLR WERDTDSGLKYYAGFGIAERSPDYWERLRAKKKIIHPEQNRQIDAGIIWKRPNLHASVSV FGSDVKNFIILERQGTDLGVRNVKASRFGGEAEVKWTFAPNWEIGSSLAYTHGKNRTDGK PLAQTPPLEWNNTLAFDNGKFSAGALWRVVAKQNRYSKGQGNIVGQDIGASSGFGVLSLN AGWKFSKYATLQAGIDNVFNKTYAEFVSKGGDPSAGTQTLRVNEPGRTAWLRLQAKF >gi|257257256|gb|ACDX02000003.1| GENE 66 87003 - 88139 1463 378 aa, chain - ## HITS:1 COG:NMA0831 KEGG:ns NR:ns ## COG: NMA0831 COG0687 # Protein_GI_number: 15793802 # Func_class: E Amino acid transport and metabolism # Function: Spermidine/putrescine-binding periplasmic protein # Organism: Neisseria meningitidis Z2491 # 1 378 1 379 379 593 78.0 1e-169 MKKTSMAAALIGLVLTACSGGEQTAAESSAPSSHTASDKLNIYNWSDYVDPATLNAFEKN ARIHVRYDYYDSNEALEAKLLTGKSGYDLVAPSIANVGRQIKAGAYQKIDKSQIPNYANI DADLLAMMAKVDPGNQYAVPYFWGINTLAINKKLVQKALGTEQLPENEWDLVFNPEYTKK LKSCGISYFDSAIEQIPLALHYLGKDPNTENPDDIKAAVNMMKKVRPDIKRFTSSGYIDD MAAGNLCVSVGYGGDLNIAKTRAQEAKNGVEIEVLAPKSGVGIWVDSLMIPRDAQNTANA HKYINHTLDPEVAAQNGNFVTYAPASRPARALMDEKYTGDASIFPTKELMDKSFIVSPKS TDASRLSVRLWQSLKAGK >gi|257257256|gb|ACDX02000003.1| GENE 67 88506 - 89093 931 195 aa, chain + ## HITS:1 COG:NMB0572 KEGG:ns NR:ns ## COG: NMB0572 COG3310 # Protein_GI_number: 15676477 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 2 195 8 201 201 333 84.0 1e-91 MTTPDSATVTDHTRQWLEKAVIGLNLCPFAKAPHVKNLVRISVSQARHLDGFLEDLDREL QLLGDTPADELETTLLVHPTLFPDFDTFNQMLDIADAAVVDNGLEGIVQIAPFHPDFQFE GTDSDDIGNYTNRSPYPTLHLIREDSIAKAAQAFPDASAIFERNIALLEEMGHEGWDKLD IPRCPFPHGKSKESE >gi|257257256|gb|ACDX02000003.1| GENE 68 89115 - 89474 488 119 aa, chain + ## HITS:1 COG:NMA0754 KEGG:ns NR:ns ## COG: NMA0754 COG2832 # Protein_GI_number: 15793729 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 118 1 118 119 175 75.0 2e-44 MIRYLLIFCGAVSFLLGIIGIFLPIMPTTPFIILAAACWAKASPHFHRWLHQHRYFGPMV QNWENNGAVPRKAKIFAISMMSLSCIFMFWRFPEQWWIGAASTLGCGCVAVWMWLRPEP >gi|257257256|gb|ACDX02000003.1| GENE 69 89713 - 90333 1154 206 aa, chain + ## HITS:1 COG:NMB0436 KEGG:ns NR:ns ## COG: NMB0436 COG0009 # Protein_GI_number: 15676348 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation factor (SUA5) # Organism: Neisseria meningitidis MC58 # 1 206 8 213 213 362 89.0 1e-100 MAQFFAIHPDNPQERLIKQATDIVRSGGVVVYPTDSCYALGCKLGDKAAMERILAIRKID LKHHLTLMCADLSELGTYAKVDNAQFRQLKAATPGSYTFILQATKEVPNRTLHPKRKTIG LRVPDNTIALSLLQELGEPLLSCTLMLPEDDEPLTDPYEIRDRLEHAVDLVIDGGWCGTE PTTVIDMTDGTELIRQGKGDITLFGL >gi|257257256|gb|ACDX02000003.1| GENE 70 90679 - 91491 1142 270 aa, chain + ## HITS:1 COG:no KEGG:NLA_7870 NR:ns ## KEGG: NLA_7870 # Name: not_defined # Def: fimbrial assembly protein # Organism: N.lactamica # Pathway: not_defined # 1 259 1 258 260 341 67.0 1e-92 MENTQTPSRWRFALKNAGWHLVVSLILAGLAALLVFAVWYPYPYSELTGGLNLYTLVVSV DIVCGPLLTLILASPKKKLRERITDFSLVGIIQLAALVYGLHSVSLARPVVAAFEKDRIN IVTAAEIDEADLAKAPEEMRQLPWFGIERVALRDPASIEEANESLSLSLKGIEPSMRPNW WQPDSPAERAKIRSAMKPLVQLAIARNMNEADILKTASVKQTDKPLFFLPLTSGKIKNWI VVMDENADFLGYAPIDGFIDKKPEFKEKVI >gi|257257256|gb|ACDX02000003.1| GENE 71 91802 - 92233 618 143 aa, chain + ## HITS:1 COG:NMB1840 KEGG:ns NR:ns ## COG: NMB1840 COG2510 # Protein_GI_number: 15677676 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis MC58 # 1 143 1 143 143 220 95.0 7e-58 MSGNAWLFWALASAGFASLTAIFAKMGLQGIDSDFATFIRTLVILAALVLFLTYTGKWQG VNGFTGRNWTFLILSGLATGASWLAYFKALQLGNASQVAPVDKFSLVLVALMAVVFLDER PSTQEWIGLGLVTAGVLTLALKR >gi|257257256|gb|ACDX02000003.1| GENE 72 92326 - 92991 1120 221 aa, chain - ## HITS:1 COG:NMB0391 KEGG:ns NR:ns ## COG: NMB0391 COG0637 # Protein_GI_number: 15676305 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Neisseria meningitidis MC58 # 1 221 1 221 221 393 97.0 1e-109 MTFTAVLFDLDGVITDTAEYHYRAWKKLAEELGISIDRKFNEQLKGVSRDDSLKRILAHG GKTVGEAEFAELTRRKNDNYVEMIQAVKPEDVYPGILPLLEALRANGKKIALASASKNGP FLLERMGLTHFFDAVADPAAVAHSKPAPDIFLAAAEGVGADIRQCIGIEDAAAGVSAIKA AGALPIGVGKAEDLGSDIALVSGTAELTYAYLQNVWAQSGR >gi|257257256|gb|ACDX02000003.1| GENE 73 93003 - 95261 3562 752 aa, chain - ## HITS:1 COG:NMA2098 KEGG:ns NR:ns ## COG: NMA2098 COG1554 # Protein_GI_number: 15794973 # Func_class: G Carbohydrate transport and metabolism # Function: Trehalose and maltose hydrolases (possible phosphorylases) # Organism: Neisseria meningitidis Z2491 # 1 752 1 752 752 1496 98.0 0 MYTRIMEISPWTLRSAKLEKEHKRLQESLTSLGNGYMGMRGSFEETYSADSHLGTYIAGV WFPDKTRVGWWKNGYPKYFGKAINALNFSKVKIFVDGQEVDLAKNDVAGFSVELDMQHGV LRRSFTVFGVRFDVCKFLSVAQKELAVIRWEAVSVDGKTHQVRIDSIIDADVKNEDSNYE EKFWQVLDKGVSDDRSYIATQTVANPFGVEQFIVNAEQTFAGSFKALGGSQTDWQVSNSF EAEVGGTPETFEKRVIVTTSRDYQGLEAVKAAGRALSEKIAGVAFETLLDAHKAGWLHRW EIADVVIEGSDEAQQGIRFNLFQLFSTYYGEDARLNIGPKGFTGEKYGGATYWDTEAYAV PLYLALAEPEVTRNLLQYRRNQLPQAQHNAREQGLAGALYPMVTFTGIECHNEWEITFEE IHRNGAIPYAIYNYTNYTGDESYLAKEGLEVLVEVSRFWADRVHFSKRNGKYMIHGVTGP NEYENNINNNWYTNTLAAWVLDYTREALAKYPRPDLNVSTAELEKWADISANMYRPHDEE LGVFVQHDGFLDKDIRPVSALSPDDLPLNQKWSWDKILRSPFIKQADVLQGIYFFGDRFN IDEKRRNFDFYEPMTVHESSLSPCIHAILAAELGKEEKAVEMYQRTARLDLDNYNNDTED GLHITSMTGSWLAIVQGFAQMKTWGGKLSFAPFLPSAWTGYAFHINYRDRLIKVAVGKEN VVFTLLKGEPLDLQVYGKDITLNGSHTVALEK >gi|257257256|gb|ACDX02000003.1| GENE 74 95384 - 96736 1621 450 aa, chain - ## HITS:1 COG:NMB0388 KEGG:ns NR:ns ## COG: NMB0388 COG0477 # Protein_GI_number: 15676302 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Neisseria meningitidis MC58 # 1 449 1 450 451 774 95.0 0 MSDNTQTTRQGLPSLPKSTIWMLSFGFLGVQTAFTLQSSQMSRIFQTLGADPHSLGWFFI LPPLAGMLVQPIVGHYSDRTWNPRLGGRRLPYLLYGTLIAVIVMILMPNSGSFGFGYASL AALSFGALMIALLDVSSNMAMQPFKMMVGDMVNEEQKSYAYGIQSFLANTGAVVAAVLPF VFAYIGLANTAEKGVVPQTVVVAFYVGAALLVITSAFTIFKVKEYDPETYARYHGIDVAA NQEKTNWFELLKTAPKAFWTVTLVQFFCWFAFQYMWTYSAGAIAENVWHTTDASSVGYQE AGNWYGVLAAVQSVAAVICSFVLAKIPNQYHKAGYFSCLALGALGFFSVFFISNQYALVL SYILIGIAWAGIITYPLTIVTNALSGKHMGTYLGLFNGSICMPQIVASLLSFILFPMMGG LQANMFLVGGVVLLLGAFSVFLIKETHGGA >gi|257257256|gb|ACDX02000003.1| GENE 75 97334 - 98788 1886 484 aa, chain + ## HITS:1 COG:NMB1999 KEGG:ns NR:ns ## COG: NMB1999 COG2239 # Protein_GI_number: 15677827 # Func_class: P Inorganic ion transport and metabolism # Function: Mg/Co/Ni transporter MgtE (contains CBS domain) # Organism: Neisseria meningitidis MC58 # 1 484 1 484 484 831 93.0 0 MSIEQTPPNLENDGIESDVERVSADFDRIHALCEILSPAFPQIEEGVPIEDEALRDKFTE LTVLLNELHPADVAAVLESLPPRERNIVWLLVTPEDDGEVLLEVSDAVRETLIESMDKDE LLAAVDDLDADELAELADDLPHQVVYEALQTRDEEERAQVKAAMSYEDNQVGAIMDFELV SIRADVACEVVLRYLRRFESLPDHTDKIFVVDENDILQGVLPIRKLLVADPEDLVADVMA TEVVRFRPEDDVEEAAQAFERYDLVTAPVVDENKKLIGRITIDEMVDVIREESEADMLNM AGLQEEEDLFAPVWDSVKNRWMWLAVNLCTAFLASRVIGAFEGSIEKIVALAALMPIVAG IGGNSGNQTITMIVRAMAMGQLTGMQAGRLLKKEVGVALVNGIIWGTVMGVVSWLLYGSI GIGLVMVAAMTLNLLLAASVGVLIPVIMEKYGRDPALGSSVLITAVTDSGGFLIFLGLST IFLL >gi|257257256|gb|ACDX02000003.1| GENE 76 99232 - 101289 3122 685 aa, chain - ## HITS:1 COG:NMA0555 KEGG:ns NR:ns ## COG: NMA0555 COG0855 # Protein_GI_number: 15793549 # Func_class: P Inorganic ion transport and metabolism # Function: Polyphosphate kinase # Organism: Neisseria meningitidis Z2491 # 1 684 1 684 685 1232 86.0 0 MPEQNRILCRELSLLAFNRRVLAQAQDENVPLLERLRFLCIVSSNLDEFFEVRMAWLKRA QKMNPHERLDNGTTPSETIAAVSAEAHALIQEQYRLFNEVLQPELSKEGIHFYRRRNWTQ GQQKWIEQYFDAELLPILTPIGLDPSHPFPRPLNKSLNFAVELEGTDAFGRPSGMAIVQA PRILPRVVPLPAELCEGGSGFVFLSSILHAHVGKLFPGMAVKGCHQFRLTRDSDLTVDEE DLKNLRAAVQNELHDREYGDGVRLEVADTCPPHIHDFLLAQFKLTPAELYQVKGPVNLVR LNAVPDLVDRPDLKFPARGAGRLKALRKNGSIFKLAKQSPILLHHPYQSFDPVVHMIREA AADPAVLAVKMTIYRTGSNSELVRALMKAALAGKQVTVVVELMARFDEANNVNWAQQLEN AGAHVVYGVFGYKIHAKMALVIRRENGALKRYAHLGTGNYHQGTSRIYTDFGIITADDQI TADVNTLFMEITGLGKPGRLNKLYQSPFTLHKMVIDRIEREIQHAKAGKPARIRAKMNSL IEPSVIDALYRASSAGVQIDLIVRGMCTLRPGVKGLSENIRVRSIIGRQLEHSRVYCFHN NGADDTFISSADWMGRNFFRRIEVATPITTPELKARVIHEGIEMALQDNTRAWLMQPDGS YTRAQPENGEPVFSLQESLWEMYGR >gi|257257256|gb|ACDX02000003.1| GENE 77 101767 - 103443 2761 558 aa, chain - ## HITS:1 COG:NMA0617 KEGG:ns NR:ns ## COG: NMA0617 COG2759 # Protein_GI_number: 15793607 # Func_class: F Nucleotide transport and metabolism # Function: Formyltetrahydrofolate synthetase # Organism: Neisseria meningitidis Z2491 # 1 558 1 558 558 1026 96.0 0 MSFKTDAEIAQSSAMRPIGEIAVKLGLNVDNIEPYGHYKAKINPAEAFKLPQKQGRLILV TAINPTPAGEGKTTVTIGLADALRHIGKDAVIALREPSLGPVFGVKGGAAGGGYAQVLPM EDINLHFTGDFHAIGAANNLLAAMLDNHIYQGNELNIDPKRVLWRRVVDMNDRQLRNIID GMGKPVDGVMRPDGFDITVASEVMAVFCLAKDISDLKERLGNILVAYAKDGNPVYAKDLK AHGAMAALLKDAIKPNLVQTIEGTPAFVHGGPFANIAHGCNSVTATRLAKHLADYAVTEA GFGADLGAEKFCDIKCRLAGLKPDAAVVVATVRALKYNGGVERANLGEENLEALAKGLPN LLKHISNLKNVFGLPVVVAINRFVSDSDAELAMIEKACAEHGVEVSLTEVWGKGGAGGAD LARKVVNAIDNQPNNFSFAYDVELSIKDKIRAIAQKVYGAEDVDFSAEAAAEIASLEKLG LDKMPVCMAKTQYSLSDNAKLLGCPEGFRITVRGITVSAGAGFIVALCGNMMKMPGLPKV PAAEKIDVDADGVIHGLF >gi|257257256|gb|ACDX02000003.1| GENE 78 103642 - 104430 1013 262 aa, chain + ## HITS:1 COG:NMA1806 KEGG:ns NR:ns ## COG: NMA1806 COG0500 # Protein_GI_number: 15794696 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Neisseria meningitidis Z2491 # 15 254 4 244 250 309 68.0 3e-84 MSVPKDLHTHTIPAVYFSDTATEHARRLAQKFDLPTLPCLPDNGEYLLADAEGVSLCRAG EKGRVRVDFGGGAAQYRRTKGGGELIAKAVNHTTKPTVWDGTGGLGRDSFVLASLGLSVH TFEQHPAVACLLADGLERALQVPEIQDIARRMTFHYGNAVELMRELAAQSRPDIVYLDPM YPERQKSAAVKKEMAYFHSVVGAAQEEAELLAAARAIAKKRVVVKRPRLGEFLNGEKPAY QYTGKSTRFDVYLPVHQVKDGE >gi|257257256|gb|ACDX02000003.1| GENE 79 104994 - 105455 642 153 aa, chain + ## HITS:1 COG:NMA0597 KEGG:ns NR:ns ## COG: NMA0597 COG0511 # Protein_GI_number: 15793587 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxyl carrier protein # Organism: Neisseria meningitidis Z2491 # 1 152 1 150 151 183 81.0 9e-47 MDLRKLKKLIDLVEESGIAEIEVTEGEEKVRITRATAAPAPVYAAPAHVAAPAPAPAAAP AATAAPAPAAPAARDLSNAQKSPMVGTFYRAPGPNAAAFVEVGQQVKAGDTLCIIEAMKL MNEIEAEKSGTVKEILVENGTPVEFGEPLFIIE >gi|257257256|gb|ACDX02000003.1| GENE 80 105526 - 105717 356 63 aa, chain + ## HITS:1 COG:no KEGG:BPP1343 NR:ns ## KEGG: BPP1343 # Name: not_defined # Def: hypothetical protein # Organism: B.parapertussis # Pathway: not_defined # 1 63 1 63 64 96 84.0 3e-19 MRLLLAIFLPFAVFFTIGRPIAGIICLILQFTLIGWIPAAMWAVYALSQYKTDEKIRNAL GKR >gi|257257256|gb|ACDX02000003.1| GENE 81 105753 - 107114 2280 453 aa, chain + ## HITS:1 COG:NMB1861 KEGG:ns NR:ns ## COG: NMB1861 COG0439 # Protein_GI_number: 15677696 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxylase # Organism: Neisseria meningitidis MC58 # 1 453 1 453 453 839 92.0 0 MLKKVLIANRGEIALRVLRACREMGIATVAVHSEADKDSLHVKLADESVCIGPAASAQSY LNIPALIAAAEVTGADAIHPGYGFLAENANFAEQVEQSGFIFIGPKAETIRLMGDKVSAK HAMIEAGVPCVPGSDGALSDDPAEILKTADKVGYPVIIKASGGGGGRGMRVVEKKEDLIK SVEMTKAEAGAAFGNPMVYMERYLQRPRHVEIQVLADEHGNAIYLAERDCSMQRRHQKVI EEAPAPFIDEKAREKIGKACTDACKRIGYRGAGTFEFLYENGEFFFIEMNTRVQVEHPVT ELITGVDIVQEQIRIAGGLPLQYKQKDIQIEGHAFECRINAEDPYNFIPSPGLIESCHLP GGFGIRVDSHIYQGYRIPPYYDSLIGKVCVIGKTREQAMAKMRVALAELAVTGIKTNTPL HRDLFSDPGFEKGGVSIHYLEHWLEERKAKQDK >gi|257257256|gb|ACDX02000003.1| GENE 82 107409 - 108296 1459 295 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|241759137|ref|ZP_04757245.1| ribosomal protein L11 methyltransferase [Neisseria flavescens SK114] # 1 295 1 295 295 566 94 1e-160 MSYQQITINVNDAVAERLADALMEHGALSAAIEDAYAGTENEQAIFGEPGMPTEQIWQQS KVIVLFGENDDAAAMIQAASQECGLKDLAYTSEILADQDWVRLTQAQFDPIQISERLWIT PSWHEAPNSNAVNLQLDPGLAFGTGSHPTTRLCLKWLDTQLKGGESVLDYGCGSGILTIA ALKLGAGSAVGVDIDEQAIRASKDNAAQNNVDAQFYLPDGLPQGQFDIVVANILANPLRM LGEMLAARTKQGGRIVLSGLLDEQVEELSGIYSQWFDIEPAEIDEGWARLSGVKR >gi|257257256|gb|ACDX02000003.1| GENE 83 108418 - 109041 318 207 aa, chain - ## HITS:1 COG:no KEGG:SUN_1494 NR:ns ## KEGG: SUN_1494 # Name: not_defined # Def: hypothetical protein # Organism: Sulfurovum_NBC37-1 # Pathway: not_defined # 34 206 33 203 258 122 33.0 8e-27 MNFDFIFGDGVSGMAGYSLILILAALASKQDSVKRLVSRFAVNVRAQCYLDENSYHVFRH LDIRISGMHEQIDYVYVSRFGIFIVSTPNYQGRIWGDNGDGMWTQKFHRTKMLFPNPLAQ NQRYIQALVRQLDLSPRLFYSVVVFSGNCQFQTMMPDNVIESTEFNEYIAQYGEIVLNDD KVAEIKEILESNEFDNVFGQNGSRSHA >gi|257257256|gb|ACDX02000003.1| GENE 84 109575 - 110000 611 141 aa, chain - ## HITS:1 COG:NMB1933 KEGG:ns NR:ns ## COG: NMB1933 COG0355 # Protein_GI_number: 15677763 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) # Organism: Neisseria meningitidis MC58 # 1 139 1 139 140 194 88.0 3e-50 MSIMRVEVVSSEQNIYSGEASFVVVPTVQGELGIYPRHEPIMSLVRPGALRLTVPGEAEE VLVAVSGGVLEVQPNQLTVLADVAVRSSEMDRERAEAAKKAAETGISQAKDDKSLAEAHK ALAAAIAQLKTLDYLRSHKNK >gi|257257256|gb|ACDX02000003.1| GENE 85 110011 - 111408 1581 465 aa, chain - ## HITS:1 COG:NMB1934 KEGG:ns NR:ns ## COG: NMB1934 COG0055 # Protein_GI_number: 15677764 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, beta subunit # Organism: Neisseria meningitidis MC58 # 1 465 1 465 465 882 97.0 0 MSQGKIVQIIGAVVDVEFPRDAIPHVYDALKLDANGLTLEVQQLLGDGVVRTIAMGSSDG LKRGMTVSNTGAPITVPVGKGTLGRIVDVLGTPVDEAGSIDTDKHRAIHQTAPKFDELSA TTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGE RTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDESGKGR DVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTQTGSITSIQA VYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYD VARGVQSTLQKYKELRDIIAILGMDELSDEDKLTVMRARKIQRFLSQPFHVAEVFTGSPG KYVSLRDTIAGFKAILNGEYDHLPEQAFYMVGGIEEAVEKAKTLN >gi|257257256|gb|ACDX02000003.1| GENE 86 111447 - 112322 529 291 aa, chain - ## HITS:1 COG:NMA0518 KEGG:ns NR:ns ## COG: NMA0518 COG0224 # Protein_GI_number: 15793516 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, gamma subunit # Organism: Neisseria meningitidis Z2491 # 1 291 1 291 291 492 89.0 1e-139 MAVGKEILTKIRSVQNTQKITKAMQMVSTSKMRKTQERMRLARPYAEKVRTVMSHLAQTH EDHGIKLLAPHRETHRVGFILITSDKGLCGGLNANVLKKFLAQVQEYQEQGIEVDVVCLG SKGLATCQNIGLNVIASAINLGDTPKMELLLGPLTEIFQRYEKHELDKIHLVYSRFVNTM RQEPRLEVLLPIGENVIEDENNYSSFSWEYRYEPSPIAVLEYLVRRYLESVVYQALSDNM ASEQAARMVAMKAATDNAGNAIKELRLVYNKSRQAAITTELSEIVAGAAAV >gi|257257256|gb|ACDX02000003.1| GENE 87 112347 - 113894 1476 515 aa, chain - ## HITS:1 COG:NMB1936 KEGG:ns NR:ns ## COG: NMB1936 COG0056 # Protein_GI_number: 15677766 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, alpha subunit # Organism: Neisseria meningitidis MC58 # 1 515 1 515 515 937 96.0 0 MQLNPAEISDLIKAKIENLSGNTEVRTRGTVISVTDGIVRIHGLSDAMQGEMLEFPGNTF GLAMNLERDSVGAVVLGEYEHIKEGDTVTCTGRILEVPVGRELVGRVVDALGRPIDGKGP INTSSTAPIEKIAPGVIARKSVDQPMQTGLKAIDSMVPIGRGQRELIIGDRQTGKTAVAL DAIVNQKGTGVICIYVAIGQKASSIANVVRKLEEHGAMEHTIVVAATASEAAALQYIAPY AGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLER AARVNEHEVEKLTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLF NAGIRPAINAGISVSRVGGAAQTKVIKKLGGGIRLALAQYRELAAFSQFASDLDEATRKQ LQHGEVVTELMKQKQFSTLDTAEMALTLWAINNGSYEDVPVPKALAFEAEFLSFVRTQHP GVLEAINASGAMSDESEKTLTEAMNSFKSSYAYQA >gi|257257256|gb|ACDX02000003.1| GENE 88 113905 - 114438 444 177 aa, chain - ## HITS:1 COG:NMB1937 KEGG:ns NR:ns ## COG: NMB1937 COG0712 # Protein_GI_number: 15677767 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) # Organism: Neisseria meningitidis MC58 # 1 177 1 177 177 253 77.0 2e-67 MAEFATIARPYAKALFNLAQEKNQIESWLGGLEELAAVVQNEKVISLIERPETNTSEKVN VLAELVELKSDELKNFITVLAEQKRLPVLPEVYAQYQALTLSFNHTKSAVIYSAYPLTED QLAELAEILKKRFDSKLQITTEVAPELIGGVKVEVGDQVLDLSVQGKLNALYATMTN >gi|257257256|gb|ACDX02000003.1| GENE 89 114443 - 114913 421 156 aa, chain - ## HITS:1 COG:NMA0515 KEGG:ns NR:ns ## COG: NMA0515 COG0711 # Protein_GI_number: 15793513 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit b # Organism: Neisseria meningitidis Z2491 # 1 156 1 156 156 187 90.0 5e-48 MNINATLFAQIIVFFGLVWFTMKFVWPPIVKALDERAAKIAEGLAAAERGKSDFEQAEKK VAELLAEGRNQVSEMVANAEKRAAKIVEEAKEQASVEAVRITAQAKADAQQEMNRAREVL REQVAALAVKGAESILRSEVDTSKHAQLLSALKQEL >gi|257257256|gb|ACDX02000003.1| GENE 90 114985 - 115221 413 78 aa, chain - ## HITS:1 COG:NMA0514 KEGG:ns NR:ns ## COG: NMA0514 COG0636 # Protein_GI_number: 15793512 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K # Organism: Neisseria meningitidis Z2491 # 1 78 1 78 78 99 100.0 2e-21 MGLIAIACGLIVALGALGASIGIAMVGSKYLESSARQPELIGPLQTKLFLIAGLIDAAFL IGVAIALLFAFVNPFAGA >gi|257257256|gb|ACDX02000003.1| GENE 91 115283 - 116134 505 283 aa, chain - ## HITS:1 COG:NMA0513 KEGG:ns NR:ns ## COG: NMA0513 COG0356 # Protein_GI_number: 15793511 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit a # Organism: Neisseria meningitidis Z2491 # 1 283 6 288 288 490 92.0 1e-138 MTAADYIKHHLQSLTSLSDVAQGQGLKNIADFSFINLDAIFFAVLLGVLGSFLLWRGAKK ATAGVPGRFQAAVEILFEFVDNMCKSIIHNEQSRKAIAPLGLTLFVWIFLMNAMDMLPVD LLPWLWQNATGNHHALLRIVPTADLNTTLALAIGVLLICIYYNIKIKGVRGWIHELFSAP FGAKLAPANFLLNLVEFLSKTVSHGMRLFGNMYAGELVFLLIALLGGAWATSGSVEVLDP ILFGFHILAGLAWAIFHILVITLQAFIFMALAFVYIGQAHDAH >gi|257257256|gb|ACDX02000003.1| GENE 92 116139 - 116492 193 117 aa, chain - ## HITS:1 COG:NMA0512 KEGG:ns NR:ns ## COG: NMA0512 COG3312 # Protein_GI_number: 15793510 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit I # Organism: Neisseria meningitidis Z2491 # 1 117 1 117 117 100 59.0 8e-22 MNQILVYQVVVLLIISVLSAVFAGVNGFWSSVVGGVCYLVPSSIAVLLLKLSKRNPLYHG KAFIIGEVLKVVLSLVMMFAVFMVWHQSLIFFPFLFGLLGVSHLVFLVLLRVKHYGR >gi|257257256|gb|ACDX02000003.1| GENE 93 116759 - 117616 1295 285 aa, chain - ## HITS:1 COG:NMA0508 KEGG:ns NR:ns ## COG: NMA0508 COG1475 # Protein_GI_number: 15793507 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Neisseria meningitidis Z2491 # 1 284 1 285 286 456 86.0 1e-128 MAKAKGGLGRGLDSLISNGVDNSSSDRLTTVAINDIQPGRYQARVQMDDEALQELADSIK AQGVIQPVIVREHGLSQYELIAGERRWRASQLAGLTEIPVVIKTISDETALAMGLIENLQ RENLNPIEEAQGLKRLADEFGLTHETIAKAVGKSRSAISNSLRLLSLPEPVQDMLYHRHL EMGHARALLTLPVVEQLELAQKAVKNGWSVREVERRSQVAHQAKQEIKKNISPDIRRLND VLTERLGVNAEVKTTNNKKGKIVLHFDTPETFEYLLKQLGIDYQM >gi|257257256|gb|ACDX02000003.1| GENE 94 117771 - 118340 464 189 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261364188|ref|ZP_05977071.1| ## NR: gi|261364188|ref|ZP_05977071.1| putative membrane protein [Neisseria mucosa ATCC 25996] putative membrane protein [Neisseria mucosa ATCC 25996] # 1 189 1 189 189 299 100.0 7e-80 MLYSFLIDMWDILHLRYKNPADYFYTLPVILAILLLLGMINAADMSLLLGVSTAAVIFAV LVTVIRWLILSRVMRYVLSRNGAPRLPLWGFILASEALMIPTLLVFYMPENAPLLMVWKT WAFWAQAVGLMRIGQVKVWAVLKGYFLSFCWFVVISGILLNLFTLAGWLDKATLMQNFEA LITSMEQAR >gi|257257256|gb|ACDX02000003.1| GENE 95 118892 - 119809 1039 305 aa, chain - ## HITS:1 COG:NMA1199 KEGG:ns NR:ns ## COG: NMA1199 COG3039 # Protein_GI_number: 15794143 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS5 family # Organism: Neisseria meningitidis Z2491 # 1 268 1 268 335 515 92.0 1e-146 MSTFFRQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQRTRYLRDHRGRPAYPLLSM FKAVLLGEWHSLSDPELKHSLITCIDFNLFCRFDELSIPDYSTLCRYRNWLAQDDTLSEL LKLINCQLTEKGLKIEKASAAVIDATIIQTAGGKQRQAIEVDEEGQVSGQTTPSKDSDAR WTKKNGLYKLGYKQHTRTDEEGYIEKLHITPANTHECNHLSPLLEGIAEGTAVYADKGYD SKENRQHLKEHRLPDGIMRKAHRNRPLTGGRRSATDICRRPVMWSNKALVRCTVNSATPG QPISG >gi|257257256|gb|ACDX02000003.1| GENE 96 120362 - 121936 1508 524 aa, chain - ## HITS:1 COG:NMA2109 KEGG:ns NR:ns ## COG: NMA2109 COG0306 # Protein_GI_number: 15794983 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate/sulphate permeases # Organism: Neisseria meningitidis Z2491 # 1 524 1 524 524 843 86.0 0 MAQTQPSANLKLINAAFAAMLVGMVGYFIYWGLGYTHYNNPILFIIATMFGVFMAFNVGG NDIANSFGTSVGSGTLTIPQALLIAAVFEVSGAVIAGGEVTDTIRKGIVDLNGLDLQPMQ FVFIMMSALLAAALWLLFASRKGLPVSTTHAIIGGIVGSALCMAFMHKIDAGTLIQWGKL GEIALSWVLSPMLGGLVSYLVFSRIKKNVLDYNDWAEGTLKTIKQEKKAYKEQHRLFFEA LNEAEKVEYATKVAHDAQIYDEPDFEPSELQSDYYRGLYELDNRKNDIDSYKALHSWVPF IGSIGGMMIAAMLIFKGLNNLHLGMSNVNSFLIIFMVGAAIWMATFVFAKSIKRKDLDKS TFQIFSWMQVFTACGFAFSHGANDIANAIGPFAAIMDALRTNSITAQNAVPPIAMLTFGI ALIVGLWFVGKEVIKTVGTSLAEMHPASGFAAELSAAAVVMAASLMGLPVSSTHILVGAV LGIGLVNRNANWKLMKPIGLAWVITLPAAAVLSVISYLVLQAVF >gi|257257256|gb|ACDX02000003.1| GENE 97 122109 - 123209 511 366 aa, chain + ## HITS:1 COG:NMA2111 KEGG:ns NR:ns ## COG: NMA2111 COG2377 # Protein_GI_number: 15794984 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted molecular chaperone distantly related to HSP70-fold metalloproteases # Organism: Neisseria meningitidis Z2491 # 1 365 2 366 367 514 70.0 1e-146 MNIRNYIGIMSGTSMDGADAVLIRMEGSRWLEAVSHAFIPYSDDLRHELLDLQNIGNNEL HRSMLLSQKLSCLYADTVSLLLKQTNLQAHDIAAIGCHGQTVRHAPEAGYSIQLADLPLL AHLTGIFTIGDFRSRDLAAGGQGAPLVPAFHQALFQSDSETRVVLNIGGISNISVLPNSS PAFGFDTGPGNMLSDAWMQAVWQRPYDKDGLIAATGTVLPDLLTRLLDHPYFSSPYPKST GRELFSLDWLKSRLKGGEKPEDILRTLLKFTAQTIYNATISAAPDVCNLYVCGGGIRNPV LMEDLHQLFSSTTKLHSTAALNLDPQWVEAAAFGWLAACWMNKIPSSPHHATGAEKSCIL GAGYYP >gi|257257256|gb|ACDX02000003.1| GENE 98 123391 - 124755 1564 454 aa, chain - ## HITS:1 COG:NMB1723 KEGG:ns NR:ns ## COG: NMB1723 COG2010 # Protein_GI_number: 15677569 # Func_class: C Energy production and conversion # Function: Cytochrome c, mono- and diheme variants # Organism: Neisseria meningitidis MC58 # 1 315 1 315 365 573 87.0 1e-163 MNTTSQFTSNFWNIYIAVIVVLSFIGLAWLLLSQNVVKRPKKGEEVKTTGHEWDGIEEYN NPLPRWWFWLYVCTWLFGIGYLIMYPGLGDYKGQWKWSSKGQYEKEMAKADQEYGKVYAK FAKMPIEQVAKDPEARAIGQNLFNTYCIQCHGSDAKGSKGFPNLTDTDWLWGGEPEKIHE TIEKGRTAQMAAWGPALGEERVKDVANYVMSLSKPKDQYDEERAERGKALFSGPPANCFT CHGDKGQGIQGLGPNLTDDVWLWGGTQKSIIETITNGRHSQMPAWGHFLDKDKLHIMTAY VWGLSNKDGKAPVKKAEPAPAPAPASAAASSAAASSASAPAQAEKAASAADAKAATPAEV KPVEKADASSAKVDGKAVFEANCKACHGGNIPGAPVVGKKDDWAPRIKQGKDTLHKHAIE GFNSMPAKGGNSSLSDDEVKAAVDYMANQSGAKF >gi|257257256|gb|ACDX02000003.1| GENE 99 124786 - 124953 77 55 aa, chain - ## HITS:1 COG:NMA1978 KEGG:ns NR:ns ## COG: NMA1978 COG4736 # Protein_GI_number: 15794860 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Cbb3-type cytochrome oxidase, subunit 3 # Organism: Neisseria meningitidis Z2491 # 1 55 1 56 56 65 67.0 3e-11 MDANWARSLFTVWVFISFILVLYIVFNRRNKKNYDDAANSIFENDDKESSEKDGR >gi|257257256|gb|ACDX02000003.1| GENE 100 124958 - 125569 912 203 aa, chain - ## HITS:1 COG:NMA1979 KEGG:ns NR:ns ## COG: NMA1979 COG2993 # Protein_GI_number: 15794861 # Func_class: C Energy production and conversion # Function: Cbb3-type cytochrome oxidase, cytochrome c subunit # Organism: Neisseria meningitidis Z2491 # 1 203 1 203 203 397 94.0 1e-110 MKLQQLAEEKVGVLIVFTLLVVSVGLLIEAVPLFFSKAVTQPIEGVKPYNALQVAGRDIY IREGCYNCHSQMIRPFRAETERYGHYSVAGESVYDHPFQWGSKRTGPDLARVGGRYSDEW HRIHLLNPRDVVPESNMPAFPWLARNKVDAEATVAHMKALRKVGTPYSDEEIAKAPEALA DKSELDAVIAYLQGLGLALKNVR >gi|257257256|gb|ACDX02000003.1| GENE 101 125593 - 127026 1780 477 aa, chain - ## HITS:1 COG:NMA1980 KEGG:ns NR:ns ## COG: NMA1980 COG3278 # Protein_GI_number: 15794862 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Cbb3-type cytochrome oxidase, subunit 1 # Organism: Neisseria meningitidis Z2491 # 1 477 5 481 481 840 94.0 0 MDTQTYNYKVVRQFAIMTVVWGIVGMLVGVIVAAQLFAPALDLSDVGPWFHFGRLRPLHT NAVIFAFGGCGLMGTSYYVVQRTCNARLFGGWLPAFTFWGWQAVIVSAVVSLPLGYTQAK EYAELEWPIDILIALVWIAYAIVFFGTIAKRKVKHIYVANWFYGGFILAVALLHIVNNIS IPAGLMKSYPVYAGAIDAMVQWWYGHNAVGFFLTAGFLGMMYYFVPKQAGRPVYSYRLSV VHFWALIFTYMWAGSHHLHYTALPDWTQSLGMVLSLILFAPSWGGMINGIMTLSGAWDKL RTDPILKFLIVSLSFYGMSTFEGPMMSIKTVNALSHYTDWTVAHVHAGALGWVGFVTIGS VYYMIPRLFGKNEMYSTKLVEAHFWIATIGVVLYIAAMWIAGVLQGLMWGSLNADGTLTY SFVESVKRTMPYYMIRFTGGLLYLSGMCIMAYNVYRTAISGKAVDAEIPAVSQTQHH >gi|257257256|gb|ACDX02000003.1| GENE 102 127355 - 129118 2383 587 aa, chain + ## HITS:1 COG:NMB1726 KEGG:ns NR:ns ## COG: NMB1726 COG3975 # Protein_GI_number: 15677572 # Func_class: R General function prediction only # Function: Predicted protease with the C-terminal PDZ domain # Organism: Neisseria meningitidis MC58 # 1 583 1 581 582 877 72.0 0 MINYKITPNPLAHEWHIRLTFRQEHDLETEISLPNWVPGSYLIRDFSRHITTIRAFCNGE YTHLTQVKKNRWRTTPQSGEWEIYYTVYAYDLSVRGSFLTAERGFFDGACLFLQVNGQEN STHQIEFPILPKTWRIATTLPQTDVHSFQTTSYHDLIDHPVELGNIEFLDFEAGGIPHRI ALSGHYPDFDRDRLVSDIRKICEAELAMFPSPAPFTHYLFLLHVGDNIYGGLEHISSTSL LADRHSLPPHGMTEANDAYTQLLGLFSHEYFHAWNVKSIKPAAFAPYDLDRENYTEQLWA FEGITSYYDDLFLARSRTIAPEAYLRLLAQSITRVQQTKGRLKQSLAESSFTAWNKFYKQ DENSPNAIVSYYQKGALAAFCLDLAIRSKSSGRHTLDSVMQQHYRDWLDTRQGIPEKQWQ ARCQAFTGLDLEDFFQTTLYTTSDLPLAELLATIGIGLQWQAQPRGHGGAFLSEPPTETP APASDFGARFKQNSDHATLTHVLNGSSAENAALCPQDKIIAIDGYACTDLAAQWAQLPIG YTARLHYFRTGILYVADITVQAAEADTAVLYITDRELFENWLYNDRA >gi|257257256|gb|ACDX02000003.1| GENE 103 129183 - 129623 782 146 aa, chain + ## HITS:1 COG:NMB1727 KEGG:ns NR:ns ## COG: NMB1727 COG3453 # Protein_GI_number: 15677573 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 1 141 1 141 142 157 54.0 6e-39 MSIQKLADNLYIAPQLTEADVQEAAKLGIQTVICNRPDGEEENQVTFKQVEGWLEAAGIR EHHHQPVVAPAINAADVAAFQNLLKSVPQPALAYCRTGTRCSLLWGYHQVQNGASVADVV AAAQQAGVNLSNFEARLQDAQQNGLA >gi|257257256|gb|ACDX02000003.1| GENE 104 129766 - 130596 901 276 aa, chain - ## HITS:1 COG:NMB0441 KEGG:ns NR:ns ## COG: NMB0441 COG0388 # Protein_GI_number: 15676353 # Func_class: R General function prediction only # Function: Predicted amidohydrolase # Organism: Neisseria meningitidis MC58 # 5 276 4 267 270 436 76.0 1e-122 MQKNIRAAAVQMISSTDPDANINTMKRLVRQAAEQGADWVLLPEYWPLMGRKDTDKLAFA EPLVGSNFSETRCARFQTTLSETAAECGVVLFGGTIPLESPDAGKVMNTMLVYDRDGTQI GLYHKMHLFGFSGLGERYAEADTISAGGDVPKLTADGVPLAAGVCYDLRFPEFFRAQQSF DVLLLPAAFTYTTGKAHWELLLRARAVENQCYVIASAQGGEHESGRRTFGHSMIIDPWGE ILGVLPEGEGIVIADLDATRLQSVRTRLPALKHRLL >gi|257257256|gb|ACDX02000003.1| GENE 105 131014 - 132927 2628 637 aa, chain - ## HITS:1 COG:NMB1867 KEGG:ns NR:ns ## COG: NMB1867 COG1154 # Protein_GI_number: 15677702 # Func_class: H Coenzyme transport and metabolism; I Lipid transport and metabolism # Function: Deoxyxylulose-5-phosphate synthase # Organism: Neisseria meningitidis MC58 # 1 634 1 630 637 1149 90.0 0 MSHTPLLDTIHLPQDLRRLDKSLLPQVAAELREFLLDSVGQTGGHFASNLGAVELTVALH YVYHTPEDKLVWDVGHQSYPHKILTGRKNQMHTMRRYGGLAGFPKRSESEYDAFGVGHSS TSIGAALGMAAADKLLGSDRRSVAIIGDGAMTAGQAFEALNCAGDMDVNLLVILNDNEMS ISPNVGALPKYLASNVVRDMRGVLSTIKAQSSKVLDKLPGAMELAQKVEHKIKTLAGEAE HAKQSLSLFENFGFRYTGPVDGHNVEHLVDVLKDLRGRKGPQLLHVITKKGNGYKLAEND PVKYHAVANLPKDVSDDLKTATSSEKENKPASKPTYTQVFGKWLCDQAAADSRLAAITPA MREGSGLVEFEQQFPDRYFDVGIAEQHAVTFAGGLACEGMKPVVAIYSTFLQRGYDQLVH DIALQNLPVLFAVDRAGIVGADGPTHAGLYDLSFLRCVPNMIVAAPSDENECRLLLSTCY QADAPAAVRYPRGTGTGTPVSDDLKTVAIGKGVIRRQGEKTAFIAFGSMVAPALAVAEKL NATVADMRFVKPIDEELIVRLAQSHDYIVTAEENAEQGGAGSAVLEVLAKHGICKPVLLL GVADTVTEHGDPKKLLDDLGLSADAMEKRIRGWLPAA >gi|257257256|gb|ACDX02000003.1| GENE 106 133090 - 133962 814 290 aa, chain - ## HITS:1 COG:NMA2045 KEGG:ns NR:ns ## COG: NMA2045 COG0287 # Protein_GI_number: 15794923 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydrogenase # Organism: Neisseria meningitidis Z2491 # 1 288 1 288 290 395 69.0 1e-110 MNTLKHIVLIGVGLIGGSFVLDLKRLGLVDTVTGIDLDRDNLDRALERRVIDRAYTQIDA LSMHEADLAVIATPVSTFPDICRAVRPYLNAHTVVTDVGSTKQSAVQAFCSVLPEHLSRC IAAHPIAGSDRSGALSAQFGLFQDRKLVITPHGEENEQAAGLVENLWRAVGAQTFRMSAE EHDAVFAAVSHMPHLAAFAYVHQIADHPDGRHYLEFAATGFRDFTRIASSHPAVWTDICL ANKNSLLDLIGGLRTQLSELERILSEEDRAALYRYFAAAKQTRDEWLERQ >gi|257257256|gb|ACDX02000003.1| GENE 107 134174 - 135259 1061 361 aa, chain + ## HITS:1 COG:YPO0416 KEGG:ns NR:ns ## COG: YPO0416 COG0859 # Protein_GI_number: 16120749 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Yersinia pestis # 11 351 1 337 346 231 41.0 1e-60 MSLAQPKRILVIKLRHHGDVLLATPVVHALKTRFPDCEIDMLVYRETADIISDNPEIAEI FTIDRSWKKQGLKTQLSEEKKLFSRLKKSGYDWAFNLSDQWRSAILAKFCAQCSVGISHI KRDRFFWRWCHDFLNPEAGRGCHITEYHMNVLPPLIRPEETQPAKVMMAIGEDARSNLQS KLKKQGWNGEDYVLFHPGARWEFKCWEDGKNAAIVQLLLNHGQNVVLTAAPSATEQQMID AVLERVKIPEGGKLWILSGNLNLRELAAAIDGCKLFIGVDSAPMHIAAALDKPQIALFGP SWLDRWHPYSDNAEVIWAGDFGDLPHPDSINTSDNTRLLKAIPLEAVWNKIAEKLGLNKE T >gi|257257256|gb|ACDX02000003.1| GENE 108 135330 - 136367 757 345 aa, chain - ## HITS:1 COG:yi5B KEGG:ns NR:ns ## COG: yi5B COG2801 # Protein_GI_number: 16131429 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 74 340 2 277 283 215 44.0 1e-55 MDTRLSRRRHRRTRTSPIQNHAPIPQKPLHRRQTRPRKNTGRAYRRVVLYARKGCLPKGV KSPQPKADRKGQSQTVQTLRAQHPLKYLLHIANLPKSSFYYHHQDRPDPDAADKALIAEI YERHKGRYGQRRIAAALDWNRKKVARLMKQMELKALIRAKKAYRHPAMGEISEHLLKRRF TAKKPNEKWLTDVTELKGKDGKLYLSPILDLFNREIVAYAMSRNANSDMVKEMLEKAAPR LTDKGTMLHSDQGVLYRTAGYRELLAEHSMVQSMSRKANCWDNAPMESFFAVLKTECFYR AGELTVDELMKQIDDYMDYYNRERCSLKLKKLSPVAYRTQLTQSA >gi|257257256|gb|ACDX02000003.1| GENE 109 136828 - 137466 853 212 aa, chain - ## HITS:1 COG:NMB0868 KEGG:ns NR:ns ## COG: NMB0868 COG2945 # Protein_GI_number: 15676764 # Func_class: R General function prediction only # Function: Predicted hydrolase of the alpha/beta superfamily # Organism: Neisseria meningitidis MC58 # 1 211 1 211 213 356 83.0 2e-98 MQKPDIIQIAGPAGLLETIYLPAAQTPARGVAVINHPNPLQGGTNTNKVIQTAAKSLSQL GFHCYLPNLRGVGNSEGVHDYGRGETQDCIAVIDYARAQHPEAEQFALSGFSFGGYVATF AAQEREPDLLLLIGAAVHHYTDRPEPASVPDVFKTLMIHGAEDEVVEISKAWTWAEPQGL PVITIAGSSHFFHGKLIVLRDTIARFVPSVLG >gi|257257256|gb|ACDX02000003.1| GENE 110 137613 - 138584 1000 323 aa, chain - ## HITS:1 COG:NMA1185 KEGG:ns NR:ns ## COG: NMA1185 COG3547 # Protein_GI_number: 15794129 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Neisseria meningitidis Z2491 # 16 323 6 318 318 539 92.0 1e-153 MQGRFMMSTQHNYAGIDIAKRNFVIAVSSLSKTKTETNNPKGIAHTIEYLKKHNVALVVM ESTGGLEIPAAKAIHHAGIAVIIANPRQTHQFAQSQSLTKTDAKDAKMLAFFAQMTAQKE DWQTMLYHPPTEAEEVLEALVNRRNQLVDMRIAEKNRLHQVHETQVESVKQLIAHFDRLI DELDKQIDDHTHTHFDGKAQVAEQIKGIGSITTATLMAMLPELGRLSHKRLASLVGIAPH PRESGETKFKSRCFGGRSAVRKALYMATVVATRFEPLIRDFYQRLLSKGKPYKVAVTAYM RKLLTILNARMRDYFAENGIRTA >gi|257257256|gb|ACDX02000003.1| GENE 111 138741 - 139742 1259 333 aa, chain - ## HITS:1 COG:CC2229 KEGG:ns NR:ns ## COG: CC2229 COG3735 # Protein_GI_number: 16126468 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Caulobacter vibrioides # 64 321 45 289 296 68 27.0 2e-11 MRPFFSLLAAGFTLLTLTACQPEAEHTASDEKIKTASAPSVDWSVPQLSSNVWKISKAGQ PDSYLAGTIHIGKKEAVLSKEAKNLLASVEQLTTETDVLPEENPETQQQYQQFFSQATDT KSLKAKLGDKAFQALQEAFRINPETAPLAEAVDGMKPWAAFLFAQSVYPAEYSSTTGVDM LLSEAAQKAGKPRRFLETMPQLAENFSAFPEESIIRILKTTTDDNEDFLEQTHEMYGLYE SGNFDGFADTHKKYEQQSLKKYPELAPLMLDWFQNDLLVGRNLKWLPEIKAQSAEKSTLF AVGIMHLMSEQGLIELLRKDGYEVTPMPKILMW >gi|257257256|gb|ACDX02000003.1| GENE 112 139881 - 140759 1305 292 aa, chain - ## HITS:1 COG:NMA1773 KEGG:ns NR:ns ## COG: NMA1773 COG2084 # Protein_GI_number: 15794666 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases # Organism: Neisseria meningitidis Z2491 # 1 290 1 289 289 470 84.0 1e-132 MSNNEYTQIGWIGLGQMGNPMVTRLLDAGIEVGVYNRSSDKTADLQTKGAKVYPSRAELI RAYPVIFLMVSDYAAILDILDEDTRKELDGKIIVNMSTIAPSENLAIKAIVEAAGGQFAE APVSGSVVPATNGTLLILFGGEENVLNPLQKVFGILGKKTFHFGEVGKGSGAKLVLNSLL GIFGEAYSEAMLMSQQFGIDTDTIIEAVGGSAMDSPMFQTKKSLWANREFPPAFALKHAS KDLNLAVNELKQAGNSLPAVETVAESYRQAVAAGYGEQDVAGVYLKLAEHQK >gi|257257256|gb|ACDX02000003.1| GENE 113 140957 - 142087 916 376 aa, chain - ## HITS:1 COG:AGl303 KEGG:ns NR:ns ## COG: AGl303 COG5430 # Protein_GI_number: 15890262 # Func_class: S Function unknown # Function: Uncharacterized secreted protein # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 82 376 37 316 316 74 29.0 4e-13 MQIIHAHSAKGRLKINTADFIQPLRLLPKTIFAAALWLMFSPAQAWAHNGIVGDYMKCTA SVSSISGAGSNVLSFGTPTQGINLLEGQIPEVQATITYECLNLRPYTTHTRLCFNIDGSN RSPSQNNPRLLAHPKHPTNTLQFQLYKPDGTVWGSNAPNSNAKPYMTEMLVIGPNSTKSG QVTLTAKLLNHQETAAPYADGSPYEAIFNGISASLNWNSTFWQDRPTNCGTYYSSNDSFP FTVQAHASPVCEFISADDIDFGTHTAGSTNLKQSGNLTVRCTNGTPYTVGLIPSNGNQEG SGEMKSTNPANTDKVPYVLKKGNSSEPWGNQSSGTGSAQRFTGDSSNQTHTISAEVKNTD YTPGEYKDKVTVDIRY >gi|257257256|gb|ACDX02000003.1| GENE 114 142078 - 144495 2948 805 aa, chain - ## HITS:1 COG:RSp1498 KEGG:ns NR:ns ## COG: RSp1498 COG3188 # Protein_GI_number: 17549717 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Ralstonia solanacearum # 30 804 48 779 786 292 28.0 2e-78 MLCFYALPSPAQDILTQAAPAAYEQAWLTVYPQVKVNGSIRDGIEPFMSRNGVLYARPES LRAYGIALPDAEAAEAGKNGVVPEIQDGVSTPGAGVWFELSTIPGLQAKYDAAAQTLDLT APLEWQPDLKTARIGVPQENRYAIAKPGFAAVLNYDTNISRNNSGSGTQGVFGEMRLSTP WGYLNHTQFANRSHNKESGSRGNTARLDTYWRTVWPEQGISLTVGDTLTGQIGSWGGTRI GGIKISRTYNTRPWKQTAPLRSYLGKSTLPGTVDLYIDGVKQMSRDVEAGEYELILPPSI SGRSNAQVVATDVLGRTVVVDMPLYGGSGLLAKGLNEWSFEAGYVRRDYGIRSAKYQSDP AASGTLRYGVSNTLTAQIHGEAARGYRQAGIAADTVLGSFGQLNLTYAESRFAGKTGRRG SAFFSTQWDKLSLSAGASRTNGQFAELGDTVYGADFFKATRHPATSASASAGWSSDKLGS FSLSYVHSHTEGQPADGIGSFGWSRSFKNRTSLYAGANKNFRNKRELSFHAGLSVSLDNG YSTSAGISRNKHNNSYQATLNKTSSGMGSTSWGIGWQQNDNANGSRSNTFNGNIRHQNIY GDGWANVYSQSGNSNWNAGWRGGLVLMGGSIFATRQVNDSFAVVSTGDMADIPIRAGGMP VGKTNRKGLALIPGLSAYQKNTVSVDIAELPLDVQLEHTVAEIAPPERSGMRVEFKIQRT RAATMTLKDAQNQLLPSGGSIMTEDGTPAAVTGFDGKTYIENMKEGRNRFTVTLPENGGT CTFEADYPETHNPDSIPELGDIICR >gi|257257256|gb|ACDX02000003.1| GENE 115 144533 - 145258 727 241 aa, chain - ## HITS:1 COG:RSp1499 KEGG:ns NR:ns ## COG: RSp1499 COG3121 # Protein_GI_number: 17549718 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Ralstonia solanacearum # 2 206 13 214 241 139 42.0 3e-33 MQKAISTLVGMLTAAAVLQSHAAGLQISPTSLSLPAKQRAGIFTLGNKGTEPLTAQVRVF RWTQDANGGEILEPTDAVIASPPMVKLEAGAQQQFRVMRVKPSDKQTEEAYRLIVDELPS PNAKPQKGIQLVMRYSLPLFVNVQNNAEPKLQWRAEKTANGKTVLVAENTGNAHAQLSNI TFQTTSAKDALTLASGLAGYVLPGNTWKRELEVSPAYLNPGRLNATVNGMPIQTEVRFAA P >gi|257257256|gb|ACDX02000003.1| GENE 116 145301 - 145933 713 210 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261364210|ref|ZP_05977093.1| ## NR: gi|261364210|ref|ZP_05977093.1| putative lipoprotein [Neisseria mucosa ATCC 25996] putative lipoprotein [Neisseria mucosa ATCC 25996] # 1 210 1 210 210 345 100.0 1e-93 MKTRFTLTSLALASLMMMGNTAMAAVVPSGTSQFFNVKIKVVGSCEVFTTTSGMTGAAIT SENDSVNGTDIDFNEQKAETNSPALERMNKGNAAQGITVNCSKNTSFNVALEPSNTNAEG TGSMSGLKGTNQDKIAYQLYKPTVSDSGDETISNTISANKWGKGEHALTLTGKGLSTAIN IPVFAKIEQGVLSDKTPDTYHDRVTVTLTY >gi|257257256|gb|ACDX02000003.1| GENE 117 146366 - 146992 730 208 aa, chain + ## HITS:1 COG:NMB0670 KEGG:ns NR:ns ## COG: NMB0670 COG0125 # Protein_GI_number: 15676568 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate kinase # Organism: Neisseria meningitidis MC58 # 1 205 1 205 206 350 84.0 2e-96 MKPKFITLDGIDGAGKSTNLAVIRQWFESHHLPVLFTREPGGTPVGEALREILLNPETKA GLRAETLMMFAARQQHLEDVILPALADGVHVVSDRFTDATFAYQGGGRGVPLQDIEMLEN WVQGGFGPDLTLLLDVPLEVSMARIGQTREKDRFEQEQADFFTRVRAVYLERAAAHPERY ALIDSNRSLEEVRADIEYALACSFGMDI >gi|257257256|gb|ACDX02000003.1| GENE 118 147212 - 148492 1863 426 aa, chain + ## HITS:1 COG:NMB0671 KEGG:ns NR:ns ## COG: NMB0671 COG0281 # Protein_GI_number: 15676569 # Func_class: C Energy production and conversion # Function: Malic enzyme # Organism: Neisseria meningitidis MC58 # 1 426 1 426 426 815 97.0 0 MENSLKEAALKFHEFPVPGKVSVTPTKSLATSKDLALAYSPGVAAPCMEIHADPQNAYKY TAKGNLVAVISNGTAVLGLGDIGALAGKPVMEGKGVLFKKFAGVDVFDIEIDEKDPQKLV DIIAALEPTFGGINLEDIKAPECFYVERELRKRCKIPVFHDDQHGTAIITAAAVLNALRF TGRKIEEATLVCSGAGAAAIACLNQLLDLGLKRENVTVCDSKGVIYKTREDKDRMDESKQ FYAIEDNGQRVLADAVKGKDIFLGLSGANLLTPEMLNTMNDKPIVFAMANPNPEILPPLA KETRSDVVIGTGRSDFPNQVNNVLCFPFIFRGALDVGATTINEEMKRACVYALADLAMEE VTEEVIAAYGKKFEFGAEYLIPTPFDSRLLPRVASATAKAAMESGVATRPIADLEAYAAK LSEWKL >gi|257257256|gb|ACDX02000003.1| GENE 119 148560 - 149207 1103 215 aa, chain - ## HITS:1 COG:NMB0620 KEGG:ns NR:ns ## COG: NMB0620 COG0546 # Protein_GI_number: 15676523 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Neisseria meningitidis MC58 # 1 215 1 215 220 383 87.0 1e-106 MIRAVLFDLDGTLADTALDLGGALNTLLARHNLPAKSMDEIRTQASHGAAGLLKLGAGIT PDHPDYAQWRTEYLDEYDSRYAQDTTLFDGVNEMIAELDKRGIKWGIITNKPMRFTDKLV PKLGFAIPPAVVVSGDTCGESKPSVKPMFHACEQIQTDPQHALYVGDAERDIQAGHNAGM KTVLADWGYIAPEDRTETWQPDYRIASPLDLLKIL >gi|257257256|gb|ACDX02000003.1| GENE 120 149268 - 150227 1553 319 aa, chain - ## HITS:1 COG:BS_czcD KEGG:ns NR:ns ## COG: BS_czcD COG1230 # Protein_GI_number: 16079718 # Func_class: P Inorganic ion transport and metabolism # Function: Co/Zn/Cd efflux system component # Organism: Bacillus subtilis # 11 319 2 310 311 345 56.0 9e-95 MSHHHEHHHHAHAHTHTANKKVLRVSFIIIAAFMLLEAFGGWLTHSLALLSDAGHMFSDA FSLGVALWAFKLGEKETTLQKTFGYKRFEILTAMFNGLSLVVIAVLIFYEAIKRLLYPPE IATLGMLVISVVGLLVNIGVAVYMLKNSDTEANVNMRGAYLHVLSDLVGSVGAIAAAVLM MAFGWKWADPLASVFVAALVGRSGWSLLKQTLHILMEGAPENIHTDDLLAIIRNTDGVKS VHDLHVWTITSNINVLSCHIVVDGSMTVAESEQIAYRIEHELSHKNIGHCTIQIESEHHP HPDSVLCANETDGAHHHHH >gi|257257256|gb|ACDX02000003.1| GENE 121 150273 - 151100 870 275 aa, chain - ## HITS:1 COG:NMA0829 KEGG:ns NR:ns ## COG: NMA0829 COG2833 # Protein_GI_number: 15793800 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 275 1 275 275 524 93.0 1e-149 MKPDIYALLELALLSDDPDEKGRLTDEAFAVVQNMDGAETNAPPLDFRHAGRPSKPVLVA PSQLTPRKMNTTEGYAAMLHAIAHIEFNAINLALDAAYRFRTLPFQFVRDWVRVAKEEVY HFRLMRERLRAFGFDYGDFEAHNHLCDMAYKTAYDPLLRMALVPRVLEARGLDVTPGIRA KVEQRGDSETCGVLDIIYRDEVGHVAIGNHWYQHLCRERGLEPVALFRSLIARYDMFIFR GYVNIEAREKAGFSRFELDMLEDFEQGLKQGKKVV >gi|257257256|gb|ACDX02000003.1| GENE 122 151408 - 152028 1062 206 aa, chain + ## HITS:1 COG:NMB0622 KEGG:ns NR:ns ## COG: NMB0622 COG2834 # Protein_GI_number: 15676525 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane lipoprotein-sorting protein # Organism: Neisseria meningitidis MC58 # 1 206 2 207 207 342 87.0 3e-94 MKQHNLFKLLAASALTATIGFAQAGAVDALKKFNNDADGISGSFTQTVQGKKKTQTAHGT FKILRPGLFKWEYTKPYKQTIVGDGQTIWLYDVDLAQVTKSAQDQTIGDSPAAILSNKTA LDSSYSLKEDGSSNGIDYVLATPKKNNAGYQYIRIGFKGDNLAAMQLKDSFGNQTSITFG SLNTKPNLSRGAFKFTPPKGVDVLSN >gi|257257256|gb|ACDX02000003.1| GENE 123 152252 - 153112 1073 286 aa, chain - ## HITS:1 COG:NMA1816_2 KEGG:ns NR:ns ## COG: NMA1816_2 COG0500 # Protein_GI_number: 15794706 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Neisseria meningitidis Z2491 # 95 285 1 191 191 318 81.0 6e-87 MDGQMELFCYQELPVWQADEIPDALRAGHAFDEGEWACLNVLQGRLKYSEADSATNTELT AEDGDQMIAPQQQFTVEPLTDDAEIKLSLYCAAKDYFHKKYGMSATHSAVVVAEDVVPAG KALDMGCGQGRNALFLGLKGFDVTAVDNNPQAVQNVNELARIEGLDVRALEYDLNAANLQ DHFDYIVATVVFMFLQPRFVPQVIADMQAHTNPGGYNLIVSAMDTEDFPCPMPFPFKFKE GELREYYCGWEIAEYKEELGAMHAKDAAGNPIQFKFVTMLAKKPEA >gi|257257256|gb|ACDX02000003.1| GENE 124 153245 - 153694 333 149 aa, chain + ## HITS:1 COG:NMA1817 KEGG:ns NR:ns ## COG: NMA1817 COG0328 # Protein_GI_number: 15794707 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HI # Organism: Neisseria meningitidis Z2491 # 1 144 1 144 145 237 83.0 6e-63 MDDTVYLYTDGACKGNPGAGGWGVLMRYRNHEKELCGGEAETTNNRMELTAVIEGLKALK RPCRVVICTDSQYVKNGMEGWIHGWKKNGWKTAAKKPVKNDDLWKELDALSHKHELQWTW VKGHAGHSENEKADALANQGAARFLQSSS >gi|257257256|gb|ACDX02000003.1| GENE 125 153752 - 155104 1272 450 aa, chain + ## HITS:1 COG:PA3043 KEGG:ns NR:ns ## COG: PA3043 COG0232 # Protein_GI_number: 15598239 # Func_class: F Nucleotide transport and metabolism # Function: dGTP triphosphohydrolase # Organism: Pseudomonas aeruginosa # 37 445 24 438 443 344 43.0 2e-94 MAMTWSQLLSPQRFRAKNGEIIPTVTPSTQEGIDALRTDFHIDYDRVVFSGAFRRLGRKT QVHPLAEHDLTHNRLTHSVEVASVGRSLGNRVGVMLQAGGFLPENNTPGDIGAVVQVACL AHDLGNPPFGHTGEDALRHWFRKEKNLRFLTSLSEVELSDVQTYEGNAHSLRIVANLEMY PDAGGMRLSAASIGALIKYPWTSQGPRGRSKFNIYQTELPFIRRVAAELGLLEAGCDQWV RHPLSYLMEASDDICYALLDLEDAVELELLTDTEVESVLSELTFEESTWHAQSSRQRCAM LRGIAIGKAIEDAAQTFMKHQSDLLSGEFKGKDLISLCSPQVQNTLEKAKELARTRIFRH RTKLMTEIATFPCLGSILDLFVPAAHALLVEQKLDVRQSLILDLLKNHNPILETDSLYQA YMKILDFVGGMTDNAAAKMAQDLSGTGILR >gi|257257256|gb|ACDX02000003.1| GENE 126 155794 - 155997 362 67 aa, chain - ## HITS:1 COG:no KEGG:NLA_6790 NR:ns ## KEGG: NLA_6790 # Name: not_defined # Def: hypothetical protein # Organism: N.lactamica # Pathway: not_defined # 1 67 31 97 98 103 86.0 2e-21 MSEAEFSDWAMKICLTGLVIFLGFIVWNLGKESKAGKFGIAILFLVLGLGVFGFIFKEVL IKFIALP >gi|257257256|gb|ACDX02000003.1| GENE 127 156116 - 157285 1564 389 aa, chain - ## HITS:1 COG:NMA1808 KEGG:ns NR:ns ## COG: NMA1808 COG0626 # Protein_GI_number: 15794698 # Func_class: E Amino acid transport and metabolism # Function: Cystathionine beta-lyases/cystathionine gamma-synthases # Organism: Neisseria meningitidis Z2491 # 1 389 1 389 389 743 96.0 0 MSKKLHPQTLAIRGGKEQTEYHEHNQALFLTSSFMWDNAQHAADLFSKKVKGFTYTRTAN PTIAAFEKRIAALEGAERAVATSTGMSAIQAAFFTFLQAGDHVISSRSLFGTTVGFINNI VTKFGIEVSHVSPTDMDEWKAAVKANTKLLFLETPSNPLGEVADLEALAELAHSIGALLV VDNSLLSPVGSQPLKHGADISVSSATKAIDGHGRVMGGVLAGSEELMTQVAMYCNSCGLA MSPFNAWQLLSGVETLSLRLEKQFDNALKIAQWLRTQPQVQAVYYTGLPDHPQAELIRKQ QNGGGIVVGFEVADQEAAWKVVDSVELFSRTANLGDVRSTITHPWTTTHGRMQPEEKLAA NIRPGLVRLSVGLEYVDDLIDDLKQALAR >gi|257257256|gb|ACDX02000003.1| GENE 128 157623 - 158558 1444 311 aa, chain - ## HITS:1 COG:NMA0718 KEGG:ns NR:ns ## COG: NMA0718 COG0181 # Protein_GI_number: 15793695 # Func_class: H Coenzyme transport and metabolism # Function: Porphobilinogen deaminase # Organism: Neisseria meningitidis Z2491 # 1 310 1 310 311 534 91.0 1e-152 MNPKKLVIASRESLLAMWQAKHIQGRLKTLYPDCEVEILGMTTRGDQILDKTLSKIGGKG LFIKELEQALQDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEEMP KGAIVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLELD ERIRLILSEADSLPAAGQGALGIEIAAHRTDLLDVLKPLNHDVTHACVTAERALARALGG SCQVPLAAYCTEEDGLLTLRGLVGHPDGSVILQAHAQAPAAYAEALGRAVAKKLADDGAQ ELIEAVLKEQA >gi|257257256|gb|ACDX02000003.1| GENE 129 158605 - 158982 407 125 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261364224|ref|ZP_05977107.1| ## NR: gi|261364224|ref|ZP_05977107.1| 50S ribosomal protein L31 type B [Neisseria mucosa ATCC 25996] 50S ribosomal protein L31 type B [Neisseria mucosa ATCC 25996] # 1 125 1 125 125 224 100.0 2e-57 MNKFLFPILIALTACSPQNKIETSTAQPTEATAEKNSGDTVKMTGTVHYSLEQAEFTANG KTYFLNGGESLMDQVEKNRLSSGSYNVTLNNICIQGKVLTKEQNQGNGFGPLGKYSQAVT VESLC >gi|257257256|gb|ACDX02000003.1| GENE 130 159266 - 159781 759 171 aa, chain + ## HITS:1 COG:NMB0538 KEGG:ns NR:ns ## COG: NMB0538 COG0319 # Protein_GI_number: 15676444 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Neisseria meningitidis MC58 # 1 169 1 169 169 276 86.0 1e-74 MKRAKKYPFLSLQRQRFCLNFENASTAVDLPSERDFYRWAWAALKSEYRRTDISLILLDE EEARAYNRDYRGKDYATNVLSFALNEGEILPDQVSDDLCGDLIICPQVVLKEAAEQGKTA EQHFAHLTMHGTLHLMGYDHIEEAEAEEMEALEIRLMQAAGYPNPYQEDEY >gi|257257256|gb|ACDX02000003.1| GENE 131 159783 - 160607 1231 274 aa, chain + ## HITS:1 COG:NMA0716 KEGG:ns NR:ns ## COG: NMA0716 COG4535 # Protein_GI_number: 15793693 # Func_class: P Inorganic ion transport and metabolism # Function: Putative Mg2+ and Co2+ transporter CorC # Organism: Neisseria meningitidis Z2491 # 1 274 1 274 274 458 92.0 1e-129 MDDTRSKPTFFERLISRLAGEPDSAEDVLSLLRQAHEQEVFDADTLLRLEKVLDFSDLEV RDAMITRSHMNVLKENDSIERITAYVIETAHSRFPVIGEDKDEVLGILHAKDLLKYMFNP EQFNLKSILRPAVFVPEGKSLNALLKEFREQRNHMAIVIDEYGGTSGLVTFEDIIEQIVG DIEDEFDEDESADNIHAVSTERWRINAVTEIEDINAFFGTDYSSEEADSIGGLVIQELGH LPVRGEKVVIGGLQFTVARADNRRLHTLMATKVK >gi|257257256|gb|ACDX02000003.1| GENE 132 160708 - 161496 1014 262 aa, chain - ## HITS:1 COG:NMA0730 KEGG:ns NR:ns ## COG: NMA0730 COG1651 # Protein_GI_number: 15793706 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Protein-disulfide isomerase # Organism: Neisseria meningitidis Z2491 # 1 261 1 260 260 423 77.0 1e-118 MKTKLIKILAPIALISLTACGQTPVSQANAAPSSAAAKPVQGKVGEALKARLEKIYESQG LKVISVSETPIQGIYEVVVSGKQIIYTDAKGDYMFVGDLIDVNTRKSLTDERAADLNKID FATLPLDKAIKEVRGNGSLKVAVFSDPDCPYCKRLEHEFEKMTDITIYNFMMPIPSLHPD AARKAEILWCQPNPTQAWTDWMRKGKFPSGKTNCDNPVAETTSLGEQFGFNGTPTLVFPN GRSQSGYSPMPHLKEIIEKNQK >gi|257257256|gb|ACDX02000003.1| GENE 133 161635 - 163803 2015 722 aa, chain + ## HITS:1 COG:NMB0551 KEGG:ns NR:ns ## COG: NMB0551 COG1198 # Protein_GI_number: 15676457 # Func_class: L Replication, recombination and repair # Function: Primosomal protein N' (replication factor Y) - superfamily II helicase # Organism: Neisseria meningitidis MC58 # 1 722 1 729 729 1395 94.0 0 MIYHRIAVNVPLSDGLLTYSHSEPLPQGTRVLVPFRNKTVVGIVWETDIAPDMDAARILS IQTTFSDEPPLPENWRDLLSFTSRYYHYPTGQAVFAALPQGLKETRAVEMPQPPLFYALN EAGRAQTPPPARFNKKAALWDALLSGGMTMAALKQVNAQAAKLIEDWTEKGWIETAEAAK PVLRSSEFQLNADQQKASDEIQTTFGSFQPFLLYGITGSGKTEVYFDVMAKVLAQGRQVL FLLPEINLTPQLLKRVENRFADVPTAVLHSQMAAGRRTQDYLRAMLGQAKLVIGTRLAVF TPLPDVGLIVVDEEHDGSFKQDNELRYHARDLAVWRAKQSGCPVVLGSATPSLESWHKAQ SGAYRLLQLTERAHAAARLPQVDILNVGRLKLDNGFSPQALQLLKQNFEAGGMSLVYLNR RGFAPALFCGDCGHTFGCPNCSAKMVLHQRARQLRCHHCDHREPIPFKCPDCGNQDLTAV GHGTQRVEETLRAFLPKAIVVRVDRDSTAHKNDWADLYRRIADNKIDILVGTQMLAKGHD FARLNLVIVLNADGSLYSADFRAPERLFAELMQVSGRAGRADKPGKVLIQTQLPEHPVFA AVKAQDYAVFAENELNERQMFAMPPFGFQTAVRADAPRVADAMEFLNAAKETLAPLLPES VSQFGASPMLMVRLAERERAQIFLESTSRQDLHRAVSLWVQVLQQNRDGKIRWSVDVDVQ EA >gi|257257256|gb|ACDX02000003.1| GENE 134 163912 - 164544 594 210 aa, chain + ## HITS:1 COG:NMB0533 KEGG:ns NR:ns ## COG: NMB0533 COG0177 # Protein_GI_number: 15676439 # Func_class: L Replication, recombination and repair # Function: Predicted EndoIII-related endonuclease # Organism: Neisseria meningitidis MC58 # 1 208 1 208 209 412 94.0 1e-115 MNKQIRKEIFERFRAANPHPTTELHFNSPFELLIAVLLSAQATDVGVNKATAKLFPVANT PQAMLDLGLDGVMEYTKTIGLYKTKSKHIMQTCRILLEKYNGEVPEDREALESLPGVGRK TANVVLNTAFGHPVMAVDTHIFRVSNRTKIAPGKDVREVEDKLMRFVPKEFLMDAHHWLI LHGRYTCKAQKPQCGKCMINDLCEYGAKLM >gi|257257256|gb|ACDX02000003.1| GENE 135 164715 - 166268 1997 517 aa, chain + ## HITS:1 COG:NMB0532 KEGG:ns NR:ns ## COG: NMB0532 COG0265 # Protein_GI_number: 15677994 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Neisseria meningitidis MC58 # 20 517 4 499 499 683 74.0 0 MQEHNPLFGKGNAVREKMNKYRYFALVTASALALGGCDKISGFFGGDSKSEEFVQRIEPS KDDGSVGMLLPDFAQLVQNEGQAVVNIQASPAGRAAGSGQSEEQGMDLSQFPDNDPFYEF FKRLVPNMPDMPEDQSADEDLNFGSGFIISKDGYILTNTHVVAGMGNIKVLLNDKREYTA KLIGSDTQSDVALLKIDASEELPVVKIGNPKDLKPGEWVAAIGAPFGFDNSVTSGIVSAK GRSLPNESYTPFIQTDVAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISFAIPIDV AMNVAEQLKTSGKVQRGQLGVIIQEVSYDLAKSFGLDKASGALIAKVMPNSPAMQAGLQV GDIVRSVNGEEVRVSSDLPVMVGSMLPGKEVSLEVWRKGEKINVKVKLGSMAEQNETSSR ATEQPQQANPADGFTVDNTGLTLRVDEGAGKSRLIVSRVSGAAERAGLKRGDEILAVSQI SVNDESSFRSALAGAGKNVPLLVQRDGNTLFLALTLQ >gi|257257256|gb|ACDX02000003.1| GENE 136 166458 - 167978 2164 506 aa, chain + ## HITS:1 COG:NMA0709 KEGG:ns NR:ns ## COG: NMA0709 COG1757 # Protein_GI_number: 15793687 # Func_class: C Energy production and conversion # Function: Na+/H+ antiporter # Organism: Neisseria meningitidis Z2491 # 1 502 1 502 506 806 91.0 0 MHLIDYSHSFLSVVPPFLALALAVITRRVLLSLGIGILVGVAFLVGGSPIDGLTHLKDMV VGLAWADGDWSLGKPKILIFLLLLGIFTSLLTFSGSNQAFADWAKQHIKGRRGAKMLTAC LVFVTFIDDYFHSLAVGAIARPVTDKFKVSRAKLAYILDSTAAPMCVLMPVSSWGASIIA TLAGLLVTYHITGYTPMGVFVAMSLMNYYALFALIMVFVVAWFSFDIGSMARLEKAALQE THDESAGSDGPKGRVYALIIPVLVLIASTVSAMIYTGAQASETFSILGAFENTDVNTSLV FGGTCGVLAVVLCTLGTIKAADYPKAVRQGISSMFGAITILILAWLISTVVSEMHTGDYL STLVADNIHPGFLPVILFLLASVMAFATGTSWGTFGIMLPIAAAMAVKVDASLVIPCMSA VMAGAVCGDHCSPISDTTILSSTGAHCNHIDHVTSQLPYALTVAGAAAVGYLVLGMTQSA WLGFFATGIVMVALIFILKDKKGKVA >gi|257257256|gb|ACDX02000003.1| GENE 137 168047 - 169135 1459 362 aa, chain + ## HITS:1 COG:NMB0530 KEGG:ns NR:ns ## COG: NMB0530 COG1472 # Protein_GI_number: 15676437 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase-related glycosidases # Organism: Neisseria meningitidis MC58 # 1 362 1 361 361 595 80.0 1e-170 MNAPHSIPRGPVMADVDAYCLTEEEKQRLLDPSIGGVILFRRNFQNVEQLKALVQEIKAL RMPELIIAVDHEGGRVQRFIDGFTRLPAMNTLGQIWDTEGEAAAKEKAEQVGWVLATELT ACGIDLSFTPVLDLDWGTCPVIGNRSFHRNVDTVTQLALALQKGLNRGGMKSCGKHFPGH GFVEGDSHLVQPEDTRSLAELEAADIIPFRALSDEGMAAVMPAHVVYPQIDGKPAGFSEK WLKRILRQDIGFKGVIFSDDLTMEGAGAAGGIKERANASFTAGCDIVLVCNRPDLVDELR DGFQIPANPDLANRWQYMANTLGKEAAQAVMQTPAFQAAQAMTAQLATPKDTAGGVKVGE AF >gi|257257256|gb|ACDX02000003.1| GENE 138 169362 - 169592 213 76 aa, chain - ## HITS:1 COG:NMB1751 KEGG:ns NR:ns ## COG: NMB1751 COG2801 # Protein_GI_number: 15678013 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Neisseria meningitidis MC58 # 1 76 51 126 126 84 55.0 6e-17 MVQSMSRKANCWDNAPMESFFAVLKTECFYRAGELTVDELMKQIDDYMDYYNRERCSLKL KKLSPVAYRTQLTQSA Prediction of potential genes in microbial genomes Time: Sat Jul 16 23:41:16 2011 Seq name: gi|257257253|gb|ACDX02000004.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont3.1, whole genome shotgun sequence Length of sequence - 160295 bp Number of predicted genes - 147, with homology - 146 Number of transcription units - 86, operones - 33 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 22 - 342 431 ## COG3293 Transposase and inactivated derivatives 2 1 Op 2 . - CDS 398 - 817 401 ## Aasi_1471 hypothetical protein - Prom 1008 - 1067 2.1 + Prom 809 - 868 2.9 3 2 Op 1 19/0.000 + CDS 918 - 1229 479 ## COG2127 Uncharacterized conserved protein 4 2 Op 2 . + CDS 1213 - 3516 1350 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 + Term 3531 - 3579 14.0 - Term 3513 - 3573 23.1 5 3 Tu 1 . - CDS 3584 - 3949 356 ## NLA_8100 hypothetical protein - Prom 4035 - 4094 5.1 + Prom 3994 - 4053 7.9 6 4 Tu 1 . + CDS 4094 - 5071 1035 ## NLA_8090 hypothetical protein + Term 5089 - 5140 16.3 + Prom 5102 - 5161 3.7 7 5 Tu 1 . + CDS 5193 - 6614 1377 ## NLA_8070 hypothetical protein + Term 6772 - 6813 -1.0 - Term 6831 - 6894 19.1 8 6 Op 1 42/0.000 - CDS 6918 - 7793 881 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components - Term 7822 - 7872 7.3 9 6 Op 2 . - CDS 7900 - 8625 209 ## PROTEIN SUPPORTED gi|225084369|ref|YP_002657150.1| ribosomal protein S16 - Prom 8764 - 8823 7.8 - Term 9073 - 9132 20.9 10 7 Tu 1 . - CDS 9149 - 10132 1632 ## COG3203 Outer membrane protein (porin) - Prom 10248 - 10307 5.6 + Prom 10198 - 10257 7.3 11 8 Tu 1 . + CDS 10445 - 12070 1980 ## COG4166 ABC-type oligopeptide transport system, periplasmic component + Prom 12072 - 12131 3.4 12 9 Tu 1 . + CDS 12320 - 14116 2852 ## COG0006 Xaa-Pro aminopeptidase 13 10 Op 1 49/0.000 + CDS 14597 - 15517 1654 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 14 10 Op 2 4/0.040 + CDS 15590 - 16498 1548 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 15 10 Op 3 . + CDS 16521 - 18125 572 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 + Term 18189 - 18231 9.1 - Term 18177 - 18218 9.7 16 11 Op 1 . - CDS 18235 - 18504 348 ## gi|261364250|ref|ZP_05977133.1| conserved hypothetical protein 17 11 Op 2 . - CDS 18497 - 18895 460 ## gi|288575535|ref|ZP_05977134.2| conserved hypothetical protein - Term 18968 - 19020 7.5 18 12 Tu 1 . - CDS 19037 - 19492 656 ## gi|288575536|ref|ZP_05977135.2| protein ElaB - Prom 19521 - 19580 6.6 - Term 19601 - 19650 16.3 19 13 Op 1 39/0.000 - CDS 19681 - 20571 1686 ## COG0074 Succinyl-CoA synthetase, alpha subunit 20 13 Op 2 . - CDS 20582 - 21748 1788 ## COG0045 Succinyl-CoA synthetase, beta subunit 21 13 Op 3 . - CDS 21847 - 22134 303 ## NGK_0886 membrane protein - Prom 22158 - 22217 2.9 - Term 22274 - 22310 7.5 22 14 Tu 1 . - CDS 22334 - 23767 828 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 - Prom 23828 - 23887 2.8 23 15 Tu 1 . - CDS 23963 - 24232 394 ## gi|261364257|ref|ZP_05977140.1| conserved hypothetical protein - Term 24361 - 24392 0.0 24 16 Op 1 21/0.000 - CDS 24429 - 25610 1622 ## COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes 25 16 Op 2 2/0.280 - CDS 25723 - 28551 3411 ## COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes - Prom 28690 - 28749 3.1 - Term 28682 - 28728 6.2 26 17 Tu 1 2/0.280 - CDS 28759 - 30051 1637 ## COG0372 Citrate synthase - Term 30125 - 30156 -0.9 27 18 Op 1 4/0.040 - CDS 30169 - 30417 287 ## COG2938 Uncharacterized conserved protein 28 18 Op 2 36/0.000 - CDS 30421 - 31128 1015 ## COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit - Prom 31161 - 31220 2.0 29 18 Op 3 22/0.000 - CDS 31252 - 33015 2074 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 30 18 Op 4 24/0.000 - CDS 33018 - 33359 426 ## COG2142 Succinate dehydrogenase, hydrophobic anchor subunit 31 18 Op 5 . - CDS 33353 - 33730 437 ## COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit - Prom 33795 - 33854 7.2 - Term 34414 - 34460 11.2 32 19 Tu 1 . - CDS 34481 - 35050 495 ## COG2032 Cu/Zn superoxide dismutase - Prom 35194 - 35253 6.5 + Prom 35153 - 35212 5.5 33 20 Tu 1 . + CDS 35346 - 35744 488 ## COG3339 Uncharacterized conserved protein + Term 35762 - 35809 15.2 - Term 35742 - 35803 22.1 34 21 Op 1 . - CDS 35813 - 36325 433 ## NLA_6930 hypothetical protein - Prom 36380 - 36439 2.8 - Term 36460 - 36504 6.6 35 21 Op 2 . - CDS 36528 - 37460 805 ## PROTEIN SUPPORTED gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 - Prom 37488 - 37547 4.0 36 22 Op 1 . - CDS 37586 - 38194 318 ## NLA_14680 integral membrane protein 37 22 Op 2 . - CDS 38191 - 39042 749 ## COG0253 Diaminopimelate epimerase 38 23 Op 1 2/0.280 - CDS 39165 - 39827 921 ## COG1309 Transcriptional regulator 39 23 Op 2 2/0.280 - CDS 39839 - 40879 1190 ## COG0812 UDP-N-acetylmuramate dehydrogenase 40 23 Op 3 . - CDS 40956 - 42335 1743 ## COG0534 Na+-driven multidrug efflux pump - Prom 42418 - 42477 2.2 - Term 42452 - 42503 8.1 41 24 Tu 1 . - CDS 42507 - 42845 527 ## COG0347 Nitrogen regulatory protein PII - Prom 42871 - 42930 4.3 + Prom 43315 - 43374 4.4 42 25 Tu 1 . + CDS 43402 - 47403 5156 ## COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain + Term 47438 - 47502 9.2 - Term 47760 - 47808 8.1 43 26 Op 1 . - CDS 47828 - 48862 1605 ## COG0418 Dihydroorotase 44 26 Op 2 . - CDS 48933 - 49535 588 ## NMO_0568 putative lipoprotein 45 26 Op 3 . - CDS 49549 - 49773 330 ## COG0425 Predicted redox protein, regulator of disulfide bond formation - Prom 49802 - 49861 6.0 + Prom 49753 - 49812 5.5 46 27 Tu 1 . + CDS 49882 - 50493 925 ## NMCC_0636 periplasmic protein + Term 50522 - 50560 9.5 - Term 50510 - 50548 9.5 47 28 Op 1 4/0.040 - CDS 50564 - 51340 926 ## COG0084 Mg-dependent DNase 48 28 Op 2 4/0.040 - CDS 51345 - 51701 665 ## COG3215 Tfp pilus assembly protein PilZ 49 28 Op 3 . - CDS 51721 - 52698 651 ## COG0470 ATPase involved in DNA replication - Prom 52725 - 52784 5.0 + Prom 52902 - 52961 5.4 50 29 Tu 1 . + CDS 52984 - 53214 401 ## NGO0222 hypothetical protein + Term 53253 - 53284 -0.5 + Prom 53219 - 53278 4.4 51 30 Tu 1 . + CDS 53367 - 53987 826 ## RMDY18_18410 inorganic pyrophosphatase/exopolyphosphatase + Prom 54018 - 54077 3.1 52 31 Tu 1 . + CDS 54100 - 54345 158 ## gi|255066009|ref|ZP_05317864.1| conserved hypothetical protein 53 32 Op 1 . + CDS 54471 - 54701 388 ## NGO0222 hypothetical protein 54 32 Op 2 13/0.000 + CDS 54711 - 55304 457 ## PROTEIN SUPPORTED gi|71274727|ref|ZP_00651015.1| Ham1-like protein 55 32 Op 3 . + CDS 55362 - 56537 1141 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases + Prom 56619 - 56678 2.1 56 33 Op 1 2/0.280 + CDS 56716 - 57105 620 ## COG0251 Putative translation initiation inhibitor, yjgF family 57 33 Op 2 . + CDS 57185 - 58015 1408 ## COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases + Term 58033 - 58084 16.1 - Term 58220 - 58263 6.6 58 34 Tu 1 . - CDS 58267 - 59322 1836 ## COG0176 Transaldolase - Prom 59359 - 59418 5.1 + Prom 59264 - 59323 3.5 59 35 Tu 1 . + CDS 59563 - 60537 1117 ## COG0794 Predicted sugar phosphate isomerase involved in capsule formation + Term 60546 - 60594 9.3 + Prom 60543 - 60602 2.9 60 36 Tu 1 . + CDS 60626 - 61885 1906 ## COG0144 tRNA and rRNA cytosine-C5-methylases - Term 61894 - 61949 11.2 61 37 Op 1 . - CDS 61952 - 62563 666 ## COG1386 Predicted transcriptional regulator containing the HTH domain - Prom 62618 - 62677 2.8 62 37 Op 2 . - CDS 62690 - 63481 527 ## Bpro_1942 hypothetical protein - Prom 63682 - 63741 7.1 63 38 Tu 1 . - CDS 63754 - 64374 803 ## NGK_0797 hypothetical protein - Prom 64407 - 64466 2.1 64 39 Op 1 . - CDS 64495 - 65004 698 ## NMA1732 hypothetical protein - Prom 65033 - 65092 4.9 - Term 65037 - 65078 6.1 65 39 Op 2 . - CDS 65100 - 65684 810 ## COG3241 Azurin - Prom 65901 - 65960 7.5 66 40 Tu 1 . - CDS 65974 - 66396 343 ## NGK_0793 hypothetical protein - Prom 66518 - 66577 6.1 + Prom 66459 - 66518 4.0 67 41 Tu 1 . + CDS 66554 - 69307 4370 ## COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) + Term 69325 - 69362 8.0 - Term 69817 - 69866 15.4 68 42 Op 1 . - CDS 69892 - 71907 2634 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases 69 42 Op 2 . - CDS 72017 - 72793 891 ## COG1349 Transcriptional regulators of sugar metabolism - Prom 72827 - 72886 3.5 - Term 72887 - 72933 13.7 70 43 Tu 1 . - CDS 72954 - 73511 545 ## COG0778 Nitroreductase - Prom 73679 - 73738 5.4 - Term 73665 - 73723 9.6 71 44 Tu 1 . - CDS 73748 - 74854 1568 ## COG1932 Phosphoserine aminotransferase - Prom 74957 - 75016 4.8 + Prom 75088 - 75147 6.2 72 45 Op 1 32/0.000 + CDS 75212 - 75643 534 ## COG0779 Uncharacterized protein conserved in bacteria 73 45 Op 2 20/0.000 + CDS 75669 - 77171 999 ## PROTEIN SUPPORTED gi|17988250|ref|NP_540884.1| transcription elongation factor NusA 74 45 Op 3 . + CDS 77171 - 80089 4245 ## COG0532 Translation initiation factor 2 (IF-2; GTPase) + Term 80109 - 80159 16.1 75 46 Tu 1 . - CDS 81366 - 81662 71 ## COG2801 Transposase and inactivated derivatives - Prom 81743 - 81802 3.7 + Prom 81627 - 81686 6.1 76 47 Op 1 . + CDS 81718 - 82566 646 ## COG3335 Transposase and inactivated derivatives 77 47 Op 2 . + CDS 82695 - 84935 2325 ## COG3587 Restriction endonuclease + Term 84960 - 85020 20.5 + Prom 84958 - 85017 5.0 78 48 Op 1 3/0.080 + CDS 85248 - 85703 351 ## COG2259 Predicted membrane protein 79 48 Op 2 5/0.040 + CDS 85785 - 86090 319 ## COG3767 Uncharacterized low-complexity protein + Term 86095 - 86149 7.1 80 49 Op 1 4/0.040 + CDS 86198 - 87040 1050 ## COG3220 Uncharacterized protein conserved in bacteria 81 49 Op 2 . + CDS 87030 - 87716 822 ## COG3219 Uncharacterized protein conserved in bacteria + Term 87795 - 87845 18.7 - Term 87781 - 87833 19.1 82 50 Tu 1 . - CDS 87859 - 89310 2242 ## COG0552 Signal recognition particle GTPase - Prom 89354 - 89413 5.2 + Prom 89313 - 89372 5.3 83 51 Tu 1 . + CDS 89456 - 91024 2333 ## COG0526 Thiol-disulfide isomerase and thioredoxins + Term 91058 - 91098 11.6 - Term 91262 - 91323 10.5 84 52 Tu 1 . - CDS 91347 - 92135 1087 ## COG0500 SAM-dependent methyltransferases - Prom 92362 - 92421 4.3 - Term 92471 - 92519 2.2 85 53 Tu 1 . - CDS 92643 - 93389 959 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) - Prom 93452 - 93511 2.6 86 54 Op 1 3/0.080 + CDS 93643 - 94140 283 ## COG1040 Predicted amidophosphoribosyltransferases 87 54 Op 2 2/0.280 + CDS 94204 - 94668 350 ## COG0219 Predicted rRNA methylase (SpoU class) 88 55 Tu 1 . + CDS 94816 - 95541 1035 ## COG0797 Lipoproteins + Term 95560 - 95597 5.5 + Prom 95754 - 95813 5.9 89 56 Tu 1 . + CDS 95838 - 96170 556 ## COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism + Term 96211 - 96280 7.2 - Term 96285 - 96317 4.0 90 57 Tu 1 . - CDS 96334 - 96852 645 ## COG3245 Cytochrome c5 - Prom 96903 - 96962 4.5 - Term 97194 - 97242 10.1 91 58 Op 1 . - CDS 97264 - 97434 245 ## gi|261364328|ref|ZP_05977211.1| conserved hypothetical protein 92 58 Op 2 . - CDS 97453 - 98043 807 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog - Prom 98216 - 98275 4.1 + Prom 98165 - 98224 6.9 93 59 Op 1 . + CDS 98247 - 98513 412 ## NLA_0190 hypothetical protein + Term 98549 - 98588 5.2 + Prom 98616 - 98675 3.6 94 59 Op 2 . + CDS 98709 - 100859 3250 ## COG1199 Rad3-related DNA helicases + Term 100872 - 100920 11.1 - Term 100858 - 100909 14.5 95 60 Tu 1 . - CDS 100929 - 102698 2335 ## COG1960 Acyl-CoA dehydrogenases - Prom 102835 - 102894 5.7 96 61 Tu 1 . + CDS 103038 - 104900 2492 ## COG0557 Exoribonuclease R + Term 104920 - 104969 12.5 - Term 105009 - 105047 -0.1 97 62 Tu 1 . - CDS 105100 - 105966 1342 ## COG1162 Predicted GTPases - Prom 106031 - 106090 1.8 98 63 Tu 1 . - CDS 106185 - 106883 720 ## COG1611 Predicted Rossmann fold nucleotide-binding protein - Prom 106937 - 106996 2.9 + Prom 107040 - 107099 3.0 99 64 Tu 1 . + CDS 107119 - 107826 979 ## COG0564 Pseudouridylate synthases, 23S RNA-specific + Term 107986 - 108037 11.1 - Term 107974 - 108024 11.0 100 65 Op 1 . - CDS 108062 - 109432 2327 ## COG0015 Adenylosuccinate lyase - Prom 109458 - 109517 2.7 101 65 Op 2 . - CDS 109533 - 110126 361 ## COG1434 Uncharacterized conserved protein - Prom 110174 - 110233 2.6 - Term 110456 - 110516 12.4 102 66 Tu 1 . - CDS 110546 - 110929 253 ## Dd586_2170 hypothetical protein - Prom 111126 - 111185 4.2 + Prom 110632 - 110691 6.2 103 67 Tu 1 . + CDS 110930 - 111118 222 ## gi|261364340|ref|ZP_05977223.1| assemBly factor CBP4 + Term 111146 - 111183 7.1 - Term 111132 - 111169 7.1 104 68 Tu 1 . - CDS 111200 - 112423 2007 ## COG3633 Na+/serine symporter - Prom 112454 - 112513 6.8 + Prom 112494 - 112553 6.6 105 69 Op 1 . + CDS 112723 - 114561 2610 ## COG0729 Outer membrane protein + Prom 114566 - 114625 4.4 106 69 Op 2 . + CDS 114645 - 115490 976 ## COG0668 Small-conductance mechanosensitive channel + Term 115567 - 115618 18.0 + Prom 115582 - 115641 2.3 107 70 Tu 1 . + CDS 115679 - 116173 509 ## COG3193 Uncharacterized protein, possibly involved in utilization of glycolate and propanediol + Term 116240 - 116305 15.3 + Prom 116387 - 116446 5.7 108 71 Tu 1 . + CDS 116629 - 120837 5100 ## COG2911 Uncharacterized protein conserved in bacteria + Term 120851 - 120912 16.4 - Term 120844 - 120894 13.6 109 72 Tu 1 . - CDS 120927 - 121544 777 ## COG2979 Uncharacterized protein conserved in bacteria + Prom 121750 - 121809 6.4 110 73 Op 1 30/0.000 + CDS 121903 - 122259 238 ## PROTEIN SUPPORTED gi|154175415|ref|YP_001407462.1| NADH dehydrogenase subunit A 111 73 Op 2 34/0.000 + CDS 122250 - 122732 457 ## PROTEIN SUPPORTED gi|154175216|ref|YP_001407461.1| NADH dehydrogenase subunit B 112 73 Op 3 22/0.000 + CDS 122746 - 123339 956 ## COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit 113 73 Op 4 15/0.000 + CDS 123329 - 124585 1771 ## COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7 114 73 Op 5 23/0.000 + CDS 124585 - 125058 710 ## COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit 115 73 Op 6 . + CDS 125456 - 126757 1719 ## COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit 116 73 Op 7 . + CDS 126757 - 127131 329 ## gi|261364353|ref|ZP_05977236.1| conserved hypothetical protein 117 74 Op 1 18/0.000 + CDS 127519 - 129780 2694 ## COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) 118 74 Op 2 31/0.000 + CDS 129783 - 130859 1677 ## COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H) + Term 130860 - 130906 6.1 119 74 Op 3 28/0.000 + CDS 130939 - 131418 605 ## COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 120 74 Op 4 30/0.000 + CDS 131430 - 132101 982 ## COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J) 121 74 Op 5 . + CDS 132098 - 132403 485 ## COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) 122 74 Op 6 . + CDS 132409 - 132945 388 ## gi|261364360|ref|ZP_05977243.1| conserved hypothetical protein + Prom 132949 - 133008 1.5 123 75 Tu 1 . + CDS 133123 - 135147 2926 ## COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit 124 76 Tu 1 . + CDS 135366 - 135671 394 ## str1594 hypothetical protein + Prom 135747 - 135806 2.1 125 77 Tu 1 . + CDS 135896 - 136216 488 ## COG0662 Mannose-6-phosphate isomerase + Prom 136378 - 136437 4.8 126 78 Op 1 22/0.000 + CDS 136457 - 137953 1932 ## COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M) 127 78 Op 2 . + CDS 137963 - 139438 1799 ## COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N) + Term 139450 - 139493 8.3 128 79 Op 1 . + CDS 139766 - 140065 492 ## NMCC_1886 hypothetical protein 129 79 Op 2 . + CDS 140120 - 141244 2084 ## COG0263 Glutamate 5-kinase + Prom 141411 - 141470 6.3 130 80 Tu 1 . + CDS 141677 - 141808 90 ## + Term 141912 - 141961 11.6 + Prom 142270 - 142329 6.1 131 81 Tu 1 . + CDS 142355 - 143638 791 ## COG0415 Deoxyribodipyrimidine photolyase + Prom 143666 - 143725 2.9 132 82 Op 1 . + CDS 143762 - 144907 2043 ## COG1289 Predicted membrane protein 133 82 Op 2 2/0.280 + CDS 144962 - 145411 762 ## COG3399 Uncharacterized protein conserved in bacteria 134 82 Op 3 . + CDS 145491 - 146459 1396 ## COG0861 Membrane protein TerC, possibly involved in tellurium resistance + Term 146476 - 146528 17.2 + Prom 146578 - 146637 3.8 135 83 Op 1 19/0.000 + CDS 146715 - 147272 794 ## COG0233 Ribosome recycling factor 136 83 Op 2 32/0.000 + CDS 147330 - 148076 757 ## COG0020 Undecaprenyl pyrophosphate synthase 137 83 Op 3 15/0.000 + CDS 148079 - 148873 1005 ## COG0575 CDP-diglyceride synthetase + Prom 148915 - 148974 1.8 138 83 Op 4 17/0.000 + CDS 148995 - 150179 1531 ## COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase + Prom 150218 - 150277 3.4 139 83 Op 5 18/0.000 + CDS 150391 - 151731 1544 ## COG0750 Predicted membrane-associated Zn-dependent proteases 1 140 83 Op 6 17/0.000 + CDS 151736 - 154135 3615 ## COG4775 Outer membrane protein/protective antigen OMA87 141 83 Op 7 15/0.000 + CDS 154289 - 154801 881 ## COG2825 Outer membrane protein + Prom 154838 - 154897 4.2 142 83 Op 8 18/0.000 + CDS 154998 - 156041 1660 ## COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 143 83 Op 9 25/0.000 + CDS 156167 - 156616 844 ## COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 144 83 Op 10 . + CDS 156702 - 157478 1374 ## COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase + Term 157637 - 157685 -0.1 + Prom 157549 - 157608 3.9 145 84 Tu 1 . + CDS 157801 - 158811 1283 ## COG1995 Pyridoxal phosphate biosynthesis protein + Term 158835 - 158880 10.5 + Prom 158826 - 158885 5.4 146 85 Tu 1 . + CDS 159010 - 159780 1462 ## COG1192 ATPases involved in chromosome partitioning + Term 159886 - 159926 7.3 - Term 159713 - 159750 2.5 147 86 Tu 1 . - CDS 159869 - 160246 268 ## COG2801 Transposase and inactivated derivatives Predicted protein(s) >gi|257257253|gb|ACDX02000004.1| GENE 1 22 - 342 431 106 aa, chain - ## HITS:1 COG:SP1928 KEGG:ns NR:ns ## COG: SP1928 COG3293 # Protein_GI_number: 15901752 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 5 103 24 124 129 81 47.0 3e-16 MGAQHDMRLARRHLTELYPYKIVIADKGYQGLAKTGLQTPKKKSKHHLLNKQDKEANRRL GKLRTVIEHINRKLKIFKILSLPYRNRRKRFGLRANLIAGLINAMG >gi|257257253|gb|ACDX02000004.1| GENE 2 398 - 817 401 139 aa, chain - ## HITS:1 COG:no KEGG:Aasi_1471 NR:ns ## KEGG: Aasi_1471 # Name: not_defined # Def: hypothetical protein # Organism: A.asiaticus # Pathway: not_defined # 1 129 13 147 157 96 45.0 3e-19 MKYENLIQRSDREFKRLTGVTPVLFHEMLQITTEAESRKVKSGRPHTLSLADQLLLTLSY LRHYHTQLELAAIYGLSESNVCRTIRKTEDALIRCKRFSLPKHKNPGDHTVIIDVTESPI ERPKKTAAVLQRQEKAAHG >gi|257257253|gb|ACDX02000004.1| GENE 3 918 - 1229 479 103 aa, chain + ## HITS:1 COG:NMA1046 KEGG:ns NR:ns ## COG: NMA1046 COG2127 # Protein_GI_number: 15793997 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 1 103 1 103 103 176 86.0 1e-44 MNNPNTHHESDTLLSDQKTAPPKRYGVFLLNDDYTTMEFVVEILTEIFMLGEEQAVAVML LVHHEGKGLCGTYTRDIAQTKQQQVMQRAKAEGHPLQCIVEEI >gi|257257253|gb|ACDX02000004.1| GENE 4 1213 - 3516 1350 767 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 5 743 3 801 815 524 37 1e-148 MSRRFNMLSPELEQILQQLYREARKAHYEFISLEHLLLVLIEEDAPVPNVLKLCGADLKV VSEQLAASVAENTPQIPDHLLDTVETQPTLGFQRVIQRAMVHTQSAGKGLVEPLDVLVAL MSETDSHAVYFLKLQSVTRFEVLRCIAHGATEDDEHKSFSDDPDNDSDDPVESKSGSLSD YTVNLNAEVKAGRIDPLIGRKHEMERLVQILCRRRKNNPLLVGEAGVGKTALAEGLAHQI VNGDIPDALKDAEVYALDMGSLLAGTKYRGDFEARVKSVLKQLEKIPHAILFIDEIHTII GAGSTSGGTMDASNLLKPALAKGSLRCIGATTYDEYRTIFDKDHALSRRFQKIDVVEPTV AETVQILRGLKPMFEGFHQVRYTQGALEAAAELSARYINERFLPDKAIDVMDEAGAAQRI LPKSKQKKVIGKAQIETVIAKVARIPEKTVSNDDKQVLQFLGRDLKNMVYGQENAIDALV AAVKMSRSGLALPDKPIGSFLFSGPTGVGKTEVAKQLAYSMGVPLQRFDMSEYMEPHAVS RLIGAPPGYVGFDQGGLLTEAANKHPHCVLLLDEIEKAHPDIFNVLLQVMDAGKLTDNNG KSADFRNVILIMTTNAGAESLSRPSLGFTAKRERGDEMQAINKLFTPEFRNRLDAIIPFA PLSEPIIAKVVDKFLLQLEHQLLDKKVEAEFTPALRKYLAEKGFDPQMGARPMHRLIQEK IRKPLADELLFGKLADGGFVRIDWDAAKEEAVLKFKKNKAKPEAAAV >gi|257257253|gb|ACDX02000004.1| GENE 5 3584 - 3949 356 121 aa, chain - ## HITS:1 COG:no KEGG:NLA_8100 NR:ns ## KEGG: NLA_8100 # Name: not_defined # Def: hypothetical protein # Organism: N.lactamica # Pathway: not_defined # 1 121 1 121 122 195 82.0 4e-49 MHTEQDKIDFSERLKTAIRLAGLDNLSNASLANRFNLRHPNQSVSTQAFHHWLVGRSIPT PDKIETLAKWLDTSGEWLRHGRMLEEDGAVSPQEALLLKYFRALSPEKQEALITLLHKAE D >gi|257257253|gb|ACDX02000004.1| GENE 6 4094 - 5071 1035 325 aa, chain + ## HITS:1 COG:no KEGG:NLA_8090 NR:ns ## KEGG: NLA_8090 # Name: not_defined # Def: hypothetical protein # Organism: N.lactamica # Pathway: not_defined # 122 250 3 135 152 71 36.0 5e-11 MSLKKVSAATIIALSLAACSSGSDSPNSTLPNTNPTVTNPSNGSQTNNGNAAAANNQNNP ASNGNTVANNGNNPTNSGNTAINNPLPRVDFSVSYGGLKTNAIKDIQKLAKDLGAPGATV KSYNVTLGNQSSSGSDLKLSEYPLKKLALNQDYRETAIARAEGNDYTVTRSGKAHIYRQN YSLIAGINPTNTTVRGSGVNESEKLDDTYILIKGQTTQTLPTAGKFDYSGIASDGASKGK LAYSVDFDNRKGSGKITGVGSDINLNEASIREGSYTNEIDNTEIKGYGIQGSSNRGNYAL GFFGPNAEEIVGTVNDGEIGFAGSR >gi|257257253|gb|ACDX02000004.1| GENE 7 5193 - 6614 1377 473 aa, chain + ## HITS:1 COG:no KEGG:NLA_8070 NR:ns ## KEGG: NLA_8070 # Name: not_defined # Def: hypothetical protein # Organism: N.lactamica # Pathway: not_defined # 41 473 2 433 434 631 71.0 1e-179 MNKNHLVLLMLSFPIAALADTPVVRVPAPVFFDKQPNSDTPSKDFTDDKPAEQRLSDDLS ADSSLEAQINRALIGRDWKTLEGLLAQYKAAPDRDAVLYDYALGALRRSQLRHGEAVSLY RGILAKHPDLAYPRFDLGVMMFENKQYHEAKAELKRAKPDLQPPMQQLADRYLASIESAQ SWQPDVSLQYEQTDNVNNASSEHVIEWNGRRWNKTAESLPQKAHGIRYGAGVSREINAGG HHFVYGSLSGDGVYYWDNQDFNEQSLRLAAGYKNRSAVQSFGVVPFAEQNWLGGKRYNRE TGIHTDFSRRLNEKWRLSLNAGYIKKYYRNSDSAARYNSHMPLAGATLAYSAPKNWLLYG GADWSHDMTKEAEQASVRKGIRFGAAKAFENGFGIRTNLRYARRTFDAPGSLVYRLTRKD HEYQANASIWHNKISWKGLVPHLNFRYLKIDSNMSGFYSRKSMQTFVSVEKQF >gi|257257253|gb|ACDX02000004.1| GENE 8 6918 - 7793 881 291 aa, chain - ## HITS:1 COG:NMA0790 KEGG:ns NR:ns ## COG: NMA0790 COG1108 # Protein_GI_number: 15793764 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Neisseria meningitidis Z2491 # 1 288 1 288 291 394 82.0 1e-109 MNLYDLLISPFAEFDFMRYALASVFCLALSAAPVGVFLVMRRMSMVGDALSHAVLPGAAI GYMFAGLSLPAMSVGGFAAGLLMALLAGLASRFTSLKEDANFAAFYLSSLAIGVVLVSKN GSSVDLLHLLFGSVLSVDIPALQLIAASASVTVTALAIIYRPLVLESIDPLFLKAVGGKG GFWHVVFLILVVMNLVAGFQALGTLMSVGLMMLPSITARLWAKSMGALMALSVFIALVCG FAGLLFSYHVEIPSGPAIILCCGVLYAVSLVFGGEGGILGKWFKRRKHKAL >gi|257257253|gb|ACDX02000004.1| GENE 9 7900 - 8625 209 241 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225084369|ref|YP_002657150.1| ribosomal protein S16 [gamma proteobacterium NOR51-B] # 2 221 8 230 309 85 25 2e-15 MSIVVENLTVSYRTRPAVHHVGIEFAEHSMWAICGPNGAGKSTFLKAVMGLQQVDTGRVL LQNLQRKDIAYLPQQSDIDRGQPMTVFELAAMGLWYEIGFFGRVNAAQRTRVLDALARVG MRDFADRQIAHLSNGQFQRVLFARMLAQGAKFLLLDEPFNAVDARTTYALLDVLCQCNEE GQAVIAVLHDYAQVRDYFSDTLLLAREKVAAGRTLSVLTDDNLARANMLMQRQESEDWCD V >gi|257257253|gb|ACDX02000004.1| GENE 10 9149 - 10132 1632 327 aa, chain - ## HITS:1 COG:NMA0398 KEGG:ns NR:ns ## COG: NMA0398 COG3203 # Protein_GI_number: 15793406 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Neisseria meningitidis Z2491 # 1 326 1 329 329 96 29.0 7e-20 MKKLLMIAVAVPLAVPALASDNEAKIGGRIFTSIEHERNGKGQSATDISDNNSRIWIMGS EKLDKDLKLIYGVNSFVAFDYNGWSTDDSYIGLRGDFGTVRAGWLSTPMHYLTGEQDAFN GNNHTQTMGRMTRFGGREIALNYESKTFDNGFNYRVQIAPGANKYKDRKRNGDWMAGVGL HYKHPTNGFNAHYALEYARNGSPDDTKDRQVHSMKVGYDKDNLYLAAGMMYARNVADKFH WEDETKTNTNTRDFQVTAGYTMGNITPKLGVAYGRSDTGKNYKQLAFNTEYKFSKRTTLS FNSGVVKESKDPKTGWAAGISLEHSLQ >gi|257257253|gb|ACDX02000004.1| GENE 11 10445 - 12070 1980 541 aa, chain + ## HITS:1 COG:YPO2182 KEGG:ns NR:ns ## COG: YPO2182 COG4166 # Protein_GI_number: 16122412 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Yersinia pestis # 36 534 38 539 545 421 45.0 1e-117 MLPTKPYSVSALSLAVVLALSACNREVKPAPEFKRSEYNKIVISNAVEPSTLDPQKSSDM AAGAIIRQMMDGLTGTDDEGKTIPALALKWEPSDEGRVWTFHLRDAKWSNGDPITAEDFV YSFRRLADPETAAPYSSYLEDAKVQGAAEILQGKAKPDTLGVKALDAKTLQFTLTAPVPY FPDMMVQQFTYPVHRATVEKFGEKWTQPGNYVSSGAYILKEWHVNSHITMDKNPAYYDSK KVSIPRAVFLASGKEYDRYRADEVDVTYSIPSDQIKIAEKEFPGQVRRATLLCSWFLEPN LESAEFKNPKVRRALNLLTDRAIITKVAARGDKEAFQLTPPNMQGGGESAPAWKPLKREA RIAEAKKLLREAGYSEEKPFEFQIVYTTSEAAKKQITALQSIWKATVPFVRPTLMNEEWK TFLDKRMQGNFSMAFAGWCSDYNDPAGMLNIFKSNNPNNAFHYKNPEFDKLMNSTLEAGI SAEERARRYVSAEAMLQRDDAFIPLYHQVSINLVKPDIQGYSDRDPLKNYTVKNWSFAPK K >gi|257257253|gb|ACDX02000004.1| GENE 12 12320 - 14116 2852 598 aa, chain + ## HITS:1 COG:NMA1640 KEGG:ns NR:ns ## COG: NMA1640 COG0006 # Protein_GI_number: 15794534 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Neisseria meningitidis Z2491 # 1 598 62 659 659 1130 94.0 0 MNTVSNYLSALREAMKAQGLDALVIPSADPHLSEYLPAHWQARRELSGFTGSVGTFVVTA DEAGVWVDSRYWEQATKQLAGSGIELQKSGQVPPYNEWLAANLSENAAVGIPSDMVSLTG KRTLAQSLAAKNIRIEHPDDLLDRVWSSRPSIPAETVFIHDPAYVSETAAEKLARVRAVM AEKGADYHLVSSLDDIAWLTNLRGSDVPFNPVFVSFLLIGKDNAVLFTDQGRLNAEAAAA LQTAGITVEPYAQVADKLAQIGGALLIEPNKTAVSTLVRLPESVRLIEGINPSTFFKSVK SEADIVHIREAMEHDGAALCGFFAEFEDIIDNGGSLTEIDVDTMLHRHRSARPGFISLSF DTIAGFNANAALPHYSATPESHSTISGNGLLLIDSGAQYKGGTTDITRVVPVGTPTAEQK RDNTLVLKAHIALAEAVFPENILSPMIDAICRKPLWQAQCDYGHGTGHGVGYFLNVHEGP QVIACAAVPGPQHAMKKGMVTSIEPGLYRPGKWGIRIENLAANQAVANPQETEFGSFLYF ETLTLCPIDTRLMDTAMMTAGEIDWVNRYHAEVRRRLEPLTEGAAKAWLIKRTEPLAR >gi|257257253|gb|ACDX02000004.1| GENE 13 14597 - 15517 1654 306 aa, chain + ## HITS:1 COG:YPO2183 KEGG:ns NR:ns ## COG: YPO2183 COG0601 # Protein_GI_number: 16122413 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Yersinia pestis # 1 306 1 306 306 409 69.0 1e-114 MLKFIIRRILSAIPTMLVLITVSFFLMRLAPGSPFTGDKNVPPAVLANIEAKYHLNDPMY LQYFNYLKQLAHGDLGPSFKYKDYNVNELLAQALPVSVELGVYAFIISTVLGVLMGTIAA LRRNTWADYTIMTAAMTGIVVPSFVKAPIMIFIFAITLKWLPAGGWNDGSLTSLIMPVAA LSIGYVAGLARITRGAMIEVLNSPYIRTARAKGLSMNSIVLRHALRPAMLPILSYLVPAF VGIITGAIVIESVFGLPGIGQLFVNGALNRDYGMILGLTILVGVLTIVFNAILDILYALI DPKIRY >gi|257257253|gb|ACDX02000004.1| GENE 14 15590 - 16498 1548 302 aa, chain + ## HITS:1 COG:PM1908 KEGG:ns NR:ns ## COG: PM1908 COG1173 # Protein_GI_number: 15603773 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Pasteurella multocida # 1 302 1 303 303 388 69.0 1e-108 MLFNKKNSRAIADAAEQAQVHGRSLWQDAWRRFSNNKAALCSVFILAAIILFVIAVPWVS AYTYDYTDWDNMQIPPSFATRHYFGTDLLGRDLLTRAAAGGRISLLIGIAGALVAVVIGT LYGALAGFFGGKLDSVMMRLLEILNAFPFMFFVILLTTFFGRNLLLIFVAIGLVSWLDVA RIVRGQTLSLKHKEFVEAARITGVSRRRIVTRHIIPNVLGVVMVYASLLVPGMIMFESFL SFLGLGVQEPKTSWGSMLQEGAASMEAAPWQLLVPCFFLVATLFCFNFIGDGLRDALDPK DR >gi|257257253|gb|ACDX02000004.1| GENE 15 16521 - 18125 572 534 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 277 530 11 264 329 224 46 1e-57 MTTPLLTVENLDIRFQLHDKTVHAVRNISFQVAKGETLALVGESGSGKSVTAMSLMRLLP ENSTRYGQDSRITFDGTSILDADEKTLRSLRGGRISFIFQEPMTSLNPFMKIGTQLTEAL RVHNKTITRKAARERILDLLNRVGIREAERRLKQYPHEFSGGQLQRIMIAMALLNDPALL IADEPTTALDVTIQAEILDLLHDLQKQMGMAIIFITHDLGLAEHYAETVCVMKDGEIVER GKIKQVFANPSHPYTAQLIHSVPKGMKDPVEGNPPELIRADNINVHFTLKHNFFGKPLKT FHAVKNISLAIRQGETLGIVGESGSGKSTLGKAIMQMLPYQGSIHFDNIDLAALTPERAR QLKAERQMVFQDPYGSLSPRLTVGEIIGEGLTVHRPEMTKAQRTELVLKVLDEVSLPADA LNRYPHEFSGGQRQRIAIARALILRPKFILLDEPTSALDRSVQIKVVELLRGLQTKYGLT YIFISHDLSVVRAVSDNVAVMQHGELVEYGSADQIFHHPQKDYTKRLINAAFDL >gi|257257253|gb|ACDX02000004.1| GENE 16 18235 - 18504 348 89 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261364250|ref|ZP_05977133.1| ## NR: gi|261364250|ref|ZP_05977133.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 74 1 74 89 94 100.0 4e-18 MNKKERDEARELLKLEAKLVRLRIEASHMKQRKWKEQDDRKSDKLMRLLDLGSELNRTRL LYKTAGLAIPRKFRLGALLAAFALKAAMK >gi|257257253|gb|ACDX02000004.1| GENE 17 18497 - 18895 460 132 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|288575535|ref|ZP_05977134.2| ## NR: gi|288575535|ref|ZP_05977134.2| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 132 39 170 170 251 100.0 1e-65 MGIRQNIEHTKTLLNQGVDLFLLRMQILNLDLAEQAENVFRIIIWLVVSGILLLVAFISL LFGLNRMLPDTAAIWVFFGITTVCLIVIAVLFGKVSKGWRSQNNKIAATLQDIQADIACL RGQDMQEGEDDE >gi|257257253|gb|ACDX02000004.1| GENE 18 19037 - 19492 656 151 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|288575536|ref|ZP_05977135.2| ## NR: gi|288575536|ref|ZP_05977135.2| protein ElaB [Neisseria mucosa ATCC 25996] protein ElaB [Neisseria mucosa ATCC 25996] # 1 151 1 151 151 196 100.0 4e-49 MDIKEKVMKKHDFESRKEALLKDIQDVMSDVEELYSKGVEVGSEEGKKAKAKLQEKLEAA KDRLHDFQEEAGDRIRYHADRAREKYDEFEEEAEERFREGKKRFAEFGEEAGDRIKRGAR QADAAVHDKPYYAMGFAALAGLVVGVLLNRR >gi|257257253|gb|ACDX02000004.1| GENE 19 19681 - 20571 1686 296 aa, chain - ## HITS:1 COG:NMB0960 KEGG:ns NR:ns ## COG: NMB0960 COG0074 # Protein_GI_number: 15676853 # Func_class: C Energy production and conversion # Function: Succinyl-CoA synthetase, alpha subunit # Organism: Neisseria meningitidis MC58 # 1 296 1 296 296 522 98.0 1e-148 MSVLINKDTKVLVQGFTGKNGTFHSEQALAYGTKVVGGVTPGKGGQTHLNLPVFNTMKEA VKETGADASVIYVPAPFVLDSIVEAVDSGVGLVVVITEGVPTLDMLKAKRYLETNGNGTR LVGPNCPGVITPGECKIGIMPGHIHTPGRIGIISRSGTLTYEAVAQTTKLGLGQSTCIGI GGDPIPGMNQIDALKLFQEDPDTDAIIMIGEIGGTAEEEAAEYIQSNVTKPVVGYIAGVT APKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIAYTRSPAELGSTMLEVLKAKSLA >gi|257257253|gb|ACDX02000004.1| GENE 20 20582 - 21748 1788 388 aa, chain - ## HITS:1 COG:NMA1153 KEGG:ns NR:ns ## COG: NMA1153 COG0045 # Protein_GI_number: 15794099 # Func_class: C Energy production and conversion # Function: Succinyl-CoA synthetase, beta subunit # Organism: Neisseria meningitidis Z2491 # 1 388 1 388 388 706 99.0 0 MNLHEYQAKELLAGYGLPVQGGILAHNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKAGGV KVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELYLGAVVDRSTR RITFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGLKDKQINEFVK LMTGAYKAFVENDFALFEVNPLAVRENGALACVDGKIGIDSNALYRLPKIAELRDKSQEN ERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDVGGGATKERVV EAFKLILEDKSVKGVLINIFGGIVRCDMIAEAIVAAVKEINVDVPVVVRLEGNNAELGAK ILNESGLKLTSADGLNDAAEKIVAAVNA >gi|257257253|gb|ACDX02000004.1| GENE 21 21847 - 22134 303 95 aa, chain - ## HITS:1 COG:no KEGG:NGK_0886 NR:ns ## KEGG: NGK_0886 # Name: not_defined # Def: membrane protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 1 95 1 95 95 159 93.0 3e-38 MNKEVIGILFIPMGILSMCMAALWQMYVMMTETYTLNRFKDKELVWRVALLFISFSLAVY LLCPNSRKKGIVFFILGGGGAIMYLLARIWLPFSK >gi|257257253|gb|ACDX02000004.1| GENE 22 22334 - 23767 828 477 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 1 476 1 457 458 323 39 3e-87 MSQYDVVVIGAGPGGYVAAIRAAQLGFKTACVDAGVNKAGDAPALGGTCLNVGCIPSKAL LQSSEHFHAAQHDFAEHGISVGDIKFDAAKMIARKDAIVTKLTGGVKFLFQKNKVTSLFG TASFAGKNGDAYQIEVDNKGEKTVIEAKHVIVATGSVPRPLPQVAIDNVNVLDNEGALNL TEVPAKLGVIGSGVIGLEMGSVWNRVGSQVTILEAMPTFLAAADQQIAKEAFKYFTKEQG LNIELGVKIGDIKSEGKGVSVAYQTAAGEAKTEVFDKLIVAIGRIPNTKGLNAEAVGLEK DERGFIKVDGECRTNLPNVWAIGDVVRGPMLAHKASDEGVAVAERIAGQKPHIDFNNVPF VIYTDPEIAWVGKTEEQLKAEGVEYKKGTSGFGANGRALAMGKAKGTVKVLADAKTDRIL GVHMIGPVVSELVTEGVTALEFFASSEDIARIIHAHPTLSEVVHEAALAADKRALHG >gi|257257253|gb|ACDX02000004.1| GENE 23 23963 - 24232 394 89 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261364257|ref|ZP_05977140.1| ## NR: gi|261364257|ref|ZP_05977140.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 89 1 89 89 176 100.0 6e-43 MKPISLFPLLAVVSLLGACAAFEGKEYSVNAYDARGRMLNKRFEMDSNKAGIPVARSVLC KRYPHATVRVYNNFTGHEVREYSPHSCRR >gi|257257253|gb|ACDX02000004.1| GENE 24 24429 - 25610 1622 393 aa, chain - ## HITS:1 COG:NMB0956 KEGG:ns NR:ns ## COG: NMB0956 COG0508 # Protein_GI_number: 15676849 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes # Organism: Neisseria meningitidis MC58 # 1 393 1 393 393 581 90.0 1e-166 MIIDVKVPMLSESVSEGTLLEWKKKVGEAVARDEILIDIETDKVVLEVPSPQAGVLVEII AQNGETVAAEQVLARIDTAATASASAEAPAAAPAPEAAPTAAQTNAAMPAAAKLAAETGV DVNTLQGSGRDGRVLKEDVQNAAAKPAAAPAVAPAPVPAGARPEQRVPMSRLRARVAERL LASQQENAILTTFNEVNMKPIMDLRAKYKEKFEKEHGTKLGFMSFFVKAAVAALKKYPVV NASVDGNDIVYHGYFDIGIAIGSPRGLVVPILRDADQMSIADIEQAIVDYAKKAKDGKIA LEDLTGGTFSITNGGTFGSMMSTPIINPPQSAILGMHATKERAVVENGQVVVRPMMYLAL SYDHRIIDGREAVLTLVAIKDALEDPARLLLDL >gi|257257253|gb|ACDX02000004.1| GENE 25 25723 - 28551 3411 942 aa, chain - ## HITS:1 COG:NMA1149 KEGG:ns NR:ns ## COG: NMA1149 COG0567 # Protein_GI_number: 15794095 # Func_class: C Energy production and conversion # Function: 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes # Organism: Neisseria meningitidis Z2491 # 1 942 1 942 942 1840 93.0 0 MMDEKLNFSYLFGSNAPYIEELYENFLENPNSVDEKWKQYFTDLSKQPGAADVDVAHAPI RESFANLAKTKSTAAIAGGMDEAMMKKQVGVLRLISAYRIQGVGAAQLDPLKRIPPRNIE ALDPKFHGLNDADMAVQFNMGEGDFSGQSKLPLSQIISNLKQTYCGHLALEYIYIPNTEE RRWLRNYFEDVLSTPSYSAEQKRRILKEMTAAETLERYLHTKYVGQKRFGVEGGESVIAG LNYLIQNAGKDGVEEVIIGMAHRGRLNVLVNILGKKPGDLFAEFEGRAEIKLPSGDVKYH MGFSSDIATPNGPMHVSLAFNPSHLEIVNPVVEGSARAKQKRLGENGRDKVLPVLIHGDS AFVGLGVNQATFNLSKTRGYTTGGTVHIVINNQIGFTTSDTRDTRSTVHCTDVAKMVSAP VIHVNGDDPERVCFAIQAALDYRKKFNKDIVIDVVCYRKWGHNEGDDPTLTQPMMYKKVS QHPGARALYTEQLIAEGVVTQAEADGYIQAYRDALDKGEHVEQTTLSNFQRTQIDWSKYQ GKDWREDVETGLPAADIERLAEKFTAVPEGFALHPTAKRVLEARKGMAAGSQPIDWGMAE TLAYANLVTKGHGVRISGEDSGRGTFSHRHAVLHDQKREKWDDGTYVPLRNMGEGTGEFL VIDSILNEEAVMAYEYGFACSAPDKLTIWEAQFGDFANGAQVTIDQFLSSGETKWGRLCG LTTILPHGYDGQGPEHSSGRVERWLQLCSEHNMQIIMPSEASQMFHLLQRQVLGSYRKPL VIFMSKRLLRFKGAMSSLENFTEGSRFRPVIGDTAERGNNESVKRVILCAGQVYYDLEAG RAERKLENDVAIVRVEQLYPFPYDEVRAELAKYPNAKSVVWAQEEPKNQGAFYQIRHRLE DVISESQKLSYAGRPSSASPAVGYMSKHVAQLKQLVEDAMTL >gi|257257253|gb|ACDX02000004.1| GENE 26 28759 - 30051 1637 430 aa, chain - ## HITS:1 COG:NMA1148 KEGG:ns NR:ns ## COG: NMA1148 COG0372 # Protein_GI_number: 15794094 # Func_class: C Energy production and conversion # Function: Citrate synthase # Organism: Neisseria meningitidis Z2491 # 4 430 1 427 427 870 96.0 0 MSNMSKSIKLNVPNQEDLELPVLEASIGHDVVDIRALTKSTGLFSFDPGFVSTASCESKI TYIDGDEGLLYYRGYPIEQLAEKSDYLEVCYLLIYGELPTPEQKAEFDNTVRRHTMLHEQ LTWFFRGFRRDAHPMAMMVGVVGALSAFYQDSLDITNPEHRKIAIYRLISKIPTIAAMCY RYSNGLPFNYPKNNLSYSENFLHMMFATPCEDYKPNPVLARALDRIFILHADHEQNASTS TVRLAGSSGANPFACIAAGIACLWGASHGGANEAVLKMLDEIGDVSRVAEYMEGVKQRKY RLMGFGHRVYRNMDPRASIMRETCHEVLKELGLEDSPKFKLAMELEQIALKDPFFVERKL YPNVDFYSGIVLSALGIPTEMFTVIFALSRSVGWISHWHEMISDPSLKIGRPRQLYTGAV RRDYVPADKR >gi|257257253|gb|ACDX02000004.1| GENE 27 30169 - 30417 287 82 aa, chain - ## HITS:1 COG:NMA1147 KEGG:ns NR:ns ## COG: NMA1147 COG2938 # Protein_GI_number: 15794093 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 1 82 1 82 82 123 96.0 9e-29 MMVFDDIAKRKIRFQTRRGLLELDLIFGRFMEKEFEQLSDKELSEFSEILEFQDQELLAL INGHSATDKEHLIPMLEKIRRA >gi|257257253|gb|ACDX02000004.1| GENE 28 30421 - 31128 1015 235 aa, chain - ## HITS:1 COG:NMA1146 KEGG:ns NR:ns ## COG: NMA1146 COG0479 # Protein_GI_number: 15794092 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit # Organism: Neisseria meningitidis Z2491 # 1 235 1 235 235 484 99.0 1e-137 MEKMSFEIYRYNPDVDAKPYMQRYELELEPTDVKLLDALVRLKAQDDTLSFRRSCREGIC GSDGMNINGKNGLACLTDLRGLKQPVKIRPLPGLPVIRDLIVDMTQFFKQYHSIKPYVVN DNPIDADKERLQTQEERKELDGLYECILCACCSTACPSFWWNPDKFVGPSGLLNAYRFIA DSRDTITNERLDNLNDPYRLFRCHTIMNCVDVCPKHLNPTRAIGKIKEIMLKRAV >gi|257257253|gb|ACDX02000004.1| GENE 29 31252 - 33015 2074 587 aa, chain - ## HITS:1 COG:NMA1145 KEGG:ns NR:ns ## COG: NMA1145 COG1053 # Protein_GI_number: 15794091 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Neisseria meningitidis Z2491 # 1 587 1 587 587 1169 99.0 0 MGFPVRKFDAVIVGGGGAGLRAALQLSKSGLNCAVLSKVFPTRSHTVAAQGGISASLGNV QEDRWDWHMYDTVKGSDWLGDQDAIEFMCRAAPEAVIELEHMGMPFDRVESGKIYQRPFG GHTAEHGKRAVERACAVADRTGHAMLHTLYQQNVRANTQFFVEWTAQDLIRDENGDVVGV TAMEMETGEVYIFHAKAVMFATGGGGRIYASSTNAYMNTGDGLGICARAGIPLEDMEFWQ FHPTGVAGAGVLITEGVRGEGGILLNADGERFMERYAPTVKDLASRDVVSRAMAMEIYEG RGCGKNKDHVLLKIDHIGAEKIMEKLPGIREISIQFAGIDPIKDPIPVVPTTHYMMGGIP TNYHGEVVVPQGDEYEVPVKGLYAAGECACASVHGANRLGTNSLLDLVVFGKAAGDSMIK FIKEQSDWKPLPADAGELTRQRIERLDNQTGGENVDALRRELQRSVQLHAGVFRTDEILS KGVREIMAIAERVKRTEIKDKSKVWNTARIEALELDNLIEVAKATLVSAEARKESRGAHA SDDHPERDDENWMKHTLYHSDTNTLSYKPVHTKPLSVEYIKPAKRVY >gi|257257253|gb|ACDX02000004.1| GENE 30 33018 - 33359 426 113 aa, chain - ## HITS:1 COG:NMA1144 KEGG:ns NR:ns ## COG: NMA1144 COG2142 # Protein_GI_number: 15794090 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase, hydrophobic anchor subunit # Organism: Neisseria meningitidis Z2491 # 1 113 1 113 113 175 95.0 2e-44 MVERKLTGAHYGLRDWAMQRATAVIMLIYTVALLVILFTLPKEYSAWQAFFDQVWVKVFT QVSFIAVFLHAWVGIRDLWMDYIKPFGVRLFLQVATIVWLVGCLVYSVKVIWG >gi|257257253|gb|ACDX02000004.1| GENE 31 33353 - 33730 437 125 aa, chain - ## HITS:1 COG:NMA1143 KEGG:ns NR:ns ## COG: NMA1143 COG2009 # Protein_GI_number: 15794089 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, cytochrome b subunit # Organism: Neisseria meningitidis Z2491 # 1 125 1 125 125 184 87.0 2e-47 MSVKPRPVFLEIPNIRLPIPGIVSILHRISGVALFVMLPVLLYLLSGTLSRESAFETYRA IVSNPLVKLILIGVLWAYLHHLFAGIRFLLLDAHKGLELNTARNTAKLVFAAALVLTVVL GALLW >gi|257257253|gb|ACDX02000004.1| GENE 32 34481 - 35050 495 189 aa, chain - ## HITS:1 COG:NMB1398 KEGG:ns NR:ns ## COG: NMB1398 COG2032 # Protein_GI_number: 15677259 # Func_class: P Inorganic ion transport and metabolism # Function: Cu/Zn superoxide dismutase # Organism: Neisseria meningitidis MC58 # 1 189 1 186 186 294 80.0 7e-80 MKFKTLLAVGISAICAAGIVNAHEHKHETMTPAGPSIKVKVQQLDPVNGNKDVGTVTITE SKYGLVFTPNLSGLEAGLHGFHIHQNPSCEPKEKDGKLTAGLGAGGHWDPKETKKHGFPW QDDAHLGDLPALTVLHDGTATNPVLAPRIKRLDEVRGRSIMIHIGGDNHSDHPAPLGGGG ARMACGVIK >gi|257257253|gb|ACDX02000004.1| GENE 33 35346 - 35744 488 132 aa, chain + ## HITS:1 COG:AGc4850 KEGG:ns NR:ns ## COG: AGc4850 COG3339 # Protein_GI_number: 15889931 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 24 120 28 122 133 70 40.0 7e-13 MKHSEEKQYTQSSDPENFIPKFRRRNLDKTGFLNKLARFAGRLGEPIVRQLYALYYLWDS PHTPRRAKMIIVGALVYFLSPIDSIPDLLGPLGFSDDIAVITLVYSQMKTYLTEDIKERA KVATEKLLRKAS >gi|257257253|gb|ACDX02000004.1| GENE 34 35813 - 36325 433 170 aa, chain - ## HITS:1 COG:no KEGG:NLA_6930 NR:ns ## KEGG: NLA_6930 # Name: not_defined # Def: hypothetical protein # Organism: N.lactamica # Pathway: not_defined # 1 170 34 198 198 244 72.0 8e-64 MVDMKKYIPILFALAALAGCETIYVPSLQEVPVRPTNVKPNIKATKAEKPAVFSLASSHW SDVSKIRDEATRLSYQVSQGKMTKVQAAQYLNKFRIQLVGRNVVDDSVYEVYLRSAVDSQ RGEINTEQSKLYIQNALRGWQQRWKNMGNKPSNPAFTNFLMEVMNMTPLK >gi|257257253|gb|ACDX02000004.1| GENE 35 36528 - 37460 805 310 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 [Streptococcus pneumoniae SP6-BS73] # 1 306 1 304 308 314 55 1e-84 MKIANSITELIGNTPLVKLNRLTEGLKAEIAVKLEFFNPGSSVKDRIAEAMVEAAEKAGK IGKDTVIVEATSGNTGIGLAMVCAARGYKLAITMPESMSKERKMLLRAFGAELILTPASE GMAGAIAKAQALVDEHPDTYFMPRQFDNEANPEVHRKTTAEEIWRDTDGKVDIFVAGVGT GGTVTGVGEVLKKHKPEVKVVAVEPEASPVLSGGEKGPHPIQGIGAGFIPTVLNTKVYDS ISQVPNEAAFETARAMAEKEGILVGISSGAAVWSALQLAKQPENEGKLIVVLLPSYGERY LSTPLFADLA >gi|257257253|gb|ACDX02000004.1| GENE 36 37586 - 38194 318 202 aa, chain - ## HITS:1 COG:no KEGG:NLA_14680 NR:ns ## KEGG: NLA_14680 # Name: not_defined # Def: integral membrane protein # Organism: N.lactamica # Pathway: not_defined # 1 200 1 200 201 206 58.0 5e-52 MIWTNLDFLSVVAYGLVFFGLIFRAEMFQWFWASVVLWLGVSILGSQLLPGMWGITHVGP LFVPHFYLTFASVFFFAFHWKKQADTDFWQADLRHPFLSVFAVSNVLMTLAFVSIIAILY FMLPSRSLAFTLPALLKLYALKPVYWFILQFVIMTVFYLHRRSIAKQSPAVFSKAQLRLG WLMALVMQVLVTGALVGEIGLH >gi|257257253|gb|ACDX02000004.1| GENE 37 38191 - 39042 749 283 aa, chain - ## HITS:1 COG:NMB0760 KEGG:ns NR:ns ## COG: NMB0760 COG0253 # Protein_GI_number: 15676658 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate epimerase # Organism: Neisseria meningitidis MC58 # 1 283 1 283 283 419 73.0 1e-117 MKTLKFTKMHGLGNDFMVVNGIAQDFDPLTAPLAEWSDRFRGVGFDQLLLVEKPSSDAVD FRYRIFNADGSEVEQCGNGARCFARFVADKGLTDKKEILVETAKGVIIPKLLDNGLVTVN MGKPRFTSSEIPFVPVPDEVEDALTHMVMVGLETVQVSCVNMGNPHAVIVVEDVQTAPVA HWGEAIESHEQFPERVNVGFMQIVDRESIRLRVFERGVGETQACGTGACAAVVAGVRLGL LAEGVPVKVSLPGGDLFITWSHGEDVLMTGPVQTVFEGELQYS >gi|257257253|gb|ACDX02000004.1| GENE 38 39165 - 39827 921 220 aa, chain - ## HITS:1 COG:NMB0810 KEGG:ns NR:ns ## COG: NMB0810 COG1309 # Protein_GI_number: 15676708 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Neisseria meningitidis MC58 # 1 211 1 211 216 404 97.0 1e-113 MPVTRIAKTNTYTRIIDASLALFNEEGERNISTNHIAAHLGISPGNLYYHFRNKDEIIVQ LFKRYSEALLAYLNEAVLPSNVEDSINYMAGIYDVMWEYRFLFSDVNTLLARSAELLGEH NTFTQAKVSPLLVNLLTQLNGLNIIQADQTAMNDLAVNMWMVTKYWFDFDSSLRGRTKLT EDSKARGIRRTLSLLRPYLLPEHREEYDRRITAASDILQS >gi|257257253|gb|ACDX02000004.1| GENE 39 39839 - 40879 1190 346 aa, chain - ## HITS:1 COG:NMB0811 KEGG:ns NR:ns ## COG: NMB0811 COG0812 # Protein_GI_number: 15676709 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate dehydrogenase # Organism: Neisseria meningitidis MC58 # 1 346 1 346 346 659 91.0 0 MQPIQYQTDLTPYNTFGLRAQAQAFIALEHADELRDIVRLPEFDRDTVLWLGGGSNILLM QDYAGLVVHMENKGIREIARSDDLVYIEAQAGEIWHDFVLHTVALGLNGLENLSLIPGTV GASPVQNIGAYGVEAKDVIHSVRCFDLDTETFVELSNADCRFAYRESLFKQEGKGRYVIV SVVFALKERFEPNLGYGDLAAAVAERSADRAPTAKDVSDAVCVIRNSKLPNPNVLGNVGS FFKNPVVCAEKAASLLQQHPDMPRYPQPDGSVKLAAGWLIDQCRLKGFQIGGAAVHDKQA LVLVNKNNASSDDVWKLAQHVCNTVFTRFQVELHAEPNWLPASFSL >gi|257257253|gb|ACDX02000004.1| GENE 40 40956 - 42335 1743 459 aa, chain - ## HITS:1 COG:NMA1022 KEGG:ns NR:ns ## COG: NMA1022 COG0534 # Protein_GI_number: 15793978 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Neisseria meningitidis Z2491 # 1 459 1 459 459 795 97.0 0 MLLDLNRFSFSVFLKEIRLLTVLALPMLLAQVAQVGIGFVDTVMAGGAGKEDLAAVALGS SAFATVYITFMGIMAALNPMIAQLYGAGKTDEVGETGRQGIWFGLILGIFGMVLMWAAIT PFRNWLTLSDYVEGTMAQYMLFTSLAMPAAMVHRALHAYASSLNRPRLIMLVSFASFVLN VPLNYIFVYGKFGMPALGGAGCGLATMVVFWFSALALWIYIAKEKFFRPFGLSAKFGKPD LAVFKQIWKIGAPIGLSYFLEASAFSFIVFLIAPFGEDYVAAQQVGISLSGILYMIPQSV GSAGTVRIGFSLGRREFSRARYISGVSLVLGWMLAVITVLSLVLFRSPLASMYNNDPAVL SIAATVLLFAGLFQPADFTQCIASYALRGYKITKVPMFIHAAAFWGCGLLPGYLLAYRFD MGIYGFWTALIASLTIAAIALVWCLELCSREMVRSHKVV >gi|257257253|gb|ACDX02000004.1| GENE 41 42507 - 42845 527 112 aa, chain - ## HITS:1 COG:NMB1995 KEGG:ns NR:ns ## COG: NMB1995 COG0347 # Protein_GI_number: 15677823 # Func_class: E Amino acid transport and metabolism # Function: Nitrogen regulatory protein PII # Organism: Neisseria meningitidis MC58 # 1 112 1 112 112 173 89.0 8e-44 MKKIEAIIKPFKLDDVREALTEIGITGMTVSEVKGFGRQKGHTEIYRGAEYAVDFLPKVK VELIIADEDVERVIDVIIENARSGKIGDGKIFVLPVEEAIRIRTGERSEAAI >gi|257257253|gb|ACDX02000004.1| GENE 42 43402 - 47403 5156 1333 aa, chain + ## HITS:1 COG:NMA0445_1 KEGG:ns NR:ns ## COG: NMA0445_1 COG0046 # Protein_GI_number: 15793449 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain # Organism: Neisseria meningitidis Z2491 # 1 989 1 993 1001 1824 90.0 0 MSVVLPLRGVTALSDFRVEKLLQKAAALGLPEVKLKSEFWYFVGSEKALDAATVEKLQAL LAAQSVEETPEAREGLHLFLVTPRLGTISPWASKATNIAENCGLEGIERIERGMAVWLEG RLNDDEKQQWAALLHDRMTESVLPDFQTASKLFHHLESETFSSVDVLGGGKEALVKANTE MGLALSADEIDYLVENYQALQRNPSDVELMMFAQANSEHCRHKIFNADFILNGEKQPKSL FGMIRDTHNAHPEGTVVAYKDNSSVIEGAKIERFYPNAAENQGYRFHEEDTHIIMKVETH NHPTAIAPFAGAATGAGGEIRDEGATGKGSRPKAGLTGFTVSNLNIPDLKQPWEQDYGKP EHISSPLDIMIEGPIGGAAFNNEFGRPNLLGYFRTFEEKFDGQVRGYHKPIMIAGGLGSI QAQQTHKDEIPEGALLIQLGGPGMLIGLGGGAASSMNTGTNDASLDFNSVQRGNPEIERR AQEVIDRCWQLGDKNPIISIHDVGAGGLSNAFPELVNDAGRGAIFKLREVPLEEHGLNPL QIWCNESQERYVLSILEKDLGTFRAICERERCPFAVVGTATDDGHLKVRDDLFSNNPVDL PLNVLLGKPPKTTRSDKTVRSSEKPFNAGNIDITEAAYRVLRLPTVAAKNFLITIGDRSV GGMTHRDQMVGKYQTPVADCAVTMMGFNTYRGEAMSMGEKPTVALFDAPASGRMCVGEAI TNIAAVNIGDIGNIKLSANWMAACGNEGEDEKLYRAVEAVSKACQALDLSIPVGKDSLSM KTVWQDGEEKKSVVSPLSLIISAFAPVKDVRKTVTPELKNVKDSVLLFIDLGFGKARMGG SAFGQVYNNMSGDAPDLDDTGRLKAFYNVIQQLVAEDKLLAYHDRSDGGLFATLAEMAFA GRVGLDINIYSLLENVILTNSKNGEMTKFTANGLKKFAIPTLFNEELGAVIQIHERDLES VRSLFIKNNFANSNINNIHFIDKEGLHIIGSINQSDDISISCVFEEHNINVDLFKQSRRN LQRAWQETSHAIQKLRDNPACADSEFALIGDNERSALFADVKFDVNEDIAAPFVNSGAKP KIAILREQGVNGQIEMAAAFTRAGFDAYDVHMSDLMAGRVHLADFKMLAACGGFSYGDVL GAGEGWAKSILFHPALRDQFAAFFADPDTLTLGVCNGCQMVSNLAEIIPGTAGWPKFKRN LSEQFEARLSMVHVPKSASLILNEMQGSSLPVVVSHGEGRADFALHGGKISDGLGIALQY VDGQNQVTQTYPLNPNGSPQGIAGVTNADGRVTIMMPHPERVYRAAQMSWKPEDWTELSG WYRLFAGARKALG >gi|257257253|gb|ACDX02000004.1| GENE 43 47828 - 48862 1605 344 aa, chain - ## HITS:1 COG:NMB0682 KEGG:ns NR:ns ## COG: NMB0682 COG0418 # Protein_GI_number: 15676580 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase # Organism: Neisseria meningitidis MC58 # 1 344 1 344 344 656 98.0 0 MQTLTIIRPDDMHLHLRDGDALKAVAPYTARQMGRAVIMPNLKPPVVSVADALAYKARIM AALPEGSAFEPLMTLYLTDQATPELVREAKAAGIVAFKLYPAGATTNSDSGVTDLFKLIP VLEEMAKQGILFLVHGEVTDPEIDIFDREAAFIERVMKPVLAQVPNLKVVFEHITTAEAA RLVLEAGDNVAASVTPQHLLLNRNDLLVGGVRPHHFCLPVLKRETHRQALVAAVTGEKAH KFFLGTDSAPHAKSAKENACGCAGMFSAMTAIELYAEVFEKAGALDKLEAFASKNGARFY GIPENADTITLVKQSQTVPASVPYGDGELVPMRAGGEIGWTVKY >gi|257257253|gb|ACDX02000004.1| GENE 44 48933 - 49535 588 200 aa, chain - ## HITS:1 COG:no KEGG:NMO_0568 NR:ns ## KEGG: NMO_0568 # Name: not_defined # Def: putative lipoprotein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 6 199 7 200 201 151 45.0 1e-35 MAKRPISRLLTLAVLSALLAACGREEVPPEQMADRANAATELFRQSCVAFDGAADKVRSF ANNEKLTALNAEEIGRLPAGFVEPDALSVWKKTQDGADYYLSLTGDSCSVKTARADETLI RKQFMVLVENPPSGLNNELRTDQASESPIPIRQLSYAWRAPGSSEETLLTVKTTPSDQLP VQAVFYLTHQSYNGKPVLVQ >gi|257257253|gb|ACDX02000004.1| GENE 45 49549 - 49773 330 74 aa, chain - ## HITS:1 COG:NMA0882 KEGG:ns NR:ns ## COG: NMA0882 COG0425 # Protein_GI_number: 15793851 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Neisseria meningitidis Z2491 # 1 74 1 74 74 124 79.0 4e-29 MNAHTLDLKGLRCPLPILKTKKALAQMQAGEVLTVLATDGGAPGDFEAFCRQTGHILLES REEDGVFTLVVKHK >gi|257257253|gb|ACDX02000004.1| GENE 46 49882 - 50493 925 203 aa, chain + ## HITS:1 COG:no KEGG:NMCC_0636 NR:ns ## KEGG: NMCC_0636 # Name: cnp1 # Def: periplasmic protein # Organism: N.meningitidis_053442 # Pathway: not_defined # 1 203 1 203 203 312 73.0 4e-84 MRRLALLTLCLAATAVNAAGFSEKDTPFNTRYKESPEEAAAREFAEQKTALPPLPDTQSG DWFDLYVSEDYGKQPKILLSSLQIMPSPDSSIRYILNVRSDKGHDNLTVEGLFCARSSFT YGKDKRSSYKVFGYGDTVNRRWIEPRKAEWKPIGSTFNKNDAMRAVLYQAFCTDGVPTTT EGLVKRLKERAGRYAPKMVRHDK >gi|257257253|gb|ACDX02000004.1| GENE 47 50564 - 51340 926 258 aa, chain - ## HITS:1 COG:NMA0982 KEGG:ns NR:ns ## COG: NMA0982 COG0084 # Protein_GI_number: 15793939 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Neisseria meningitidis Z2491 # 1 257 1 257 259 434 78.0 1e-121 MHLIDSHCHLNFEGLSNRLPEVFANMGQQSVKQALAISVSKQSFAEVFDIAQANEQIYCT IGVHPDSQEAEEFTVSEMVEAAKHPKVVGIGETGLDYYWCKGDLAWQHRRFAEHIQAANE SGLPVIVHTRDAAADTLAILKEGQTNSGVIHCFTEDTAFAKAALDLGLYISFSGIVTFKN APQIQEAAKYVPADRMLVETDAPFLAPVPKRGKPNEPSYVRYTAEFVAKLRGESVETLAA YTSDNFYRLFNKVPDIRI >gi|257257253|gb|ACDX02000004.1| GENE 48 51345 - 51701 665 118 aa, chain - ## HITS:1 COG:NMA0981 KEGG:ns NR:ns ## COG: NMA0981 COG3215 # Protein_GI_number: 15793938 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein PilZ # Organism: Neisseria meningitidis Z2491 # 6 118 5 116 116 162 69.0 1e-40 MVNYNKDIPAKMMALQLKDPTLLYNCYMPFLEHGGLFVPTEDVFSLGEDILLAVEIADYP KRFLPTKVVWINPARTSAHRPKGVGLAFSEHESCLQAKTLIEGELGPKLRSDRVTFTL >gi|257257253|gb|ACDX02000004.1| GENE 49 51721 - 52698 651 325 aa, chain - ## HITS:1 COG:NMA0980 KEGG:ns NR:ns ## COG: NMA0980 COG0470 # Protein_GI_number: 15793937 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication # Organism: Neisseria meningitidis Z2491 # 1 321 1 320 325 450 67.0 1e-126 MIYPWHQNQWRQLADHWENRPNAWLFTGKENTGKTAFARFVAQALLCESPREDHQPCGVC ASCHLFSQNSHPDFYELTPEIPEDGAVGRKLLQIKIDAVRDIVENIYLTAVRGGLRVVLV HPAESMNVQAANGLLKALEEPPQHVVFLMVTHARDKLLPTIKSRCRQMVLPAPSRDEALA YLREEGVDDAQSLLAFHSGAPLFAHTPEIDDLREELLTLLAAPRLLTILDYAATFDKHKQ PLAVFIDWMQKWLLDVGLAQQQMPPLYYPDYAQALSQTASKTDPRRLFALTGRLNALSPY GYHTLSVKMQLEYLLTEYLEFWQNK >gi|257257253|gb|ACDX02000004.1| GENE 50 52984 - 53214 401 76 aa, chain + ## HITS:1 COG:no KEGG:NGO0222 NR:ns ## KEGG: NGO0222 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae # Pathway: not_defined # 1 63 1 63 77 68 66.0 7e-11 MNRQKTYLLLTALFTLIFIALIMLGGYLLSIQSKQFAVAAFLFAFGAVFAQIGSLALYIR HKARAQIMREQQTESH >gi|257257253|gb|ACDX02000004.1| GENE 51 53367 - 53987 826 206 aa, chain + ## HITS:1 COG:no KEGG:RMDY18_18410 NR:ns ## KEGG: RMDY18_18410 # Name: not_defined # Def: inorganic pyrophosphatase/exopolyphosphatase # Organism: R.mucilaginosa # Pathway: not_defined # 3 203 47 247 247 176 46.0 8e-43 MKQNIIVVLFNISSEAYQAFSELKAYSQTTDALVAQAVLIKKENGLIIPAESTDFTANTV EGTWTGGLIGSLVGILGGPIGVLLGGATGALIGSDAGTAQTLGEGLLLENTAKKLDNGST AIIILAQESDEAVLDAFFHRFKTVILRQDAAVAQQDVLAAIEAQEEVARQAHEAWKKQRK AERKEKVEAFKADIKQKFDKLAAKLK >gi|257257253|gb|ACDX02000004.1| GENE 52 54100 - 54345 158 81 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|255066009|ref|ZP_05317864.1| ## NR: gi|255066009|ref|ZP_05317864.1| conserved hypothetical protein [Neisseria sicca ATCC 29256] conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria sicca ATCC 29256] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 81 1 81 81 132 100.0 7e-30 MPRQTIMLTPQSCDLFQRPFFQFAQIRQYQPETEAQTKQGRLQSRVASVAHVGFTGSLTT GRGLCPAAYRTLVQRLAARPG >gi|257257253|gb|ACDX02000004.1| GENE 53 54471 - 54701 388 76 aa, chain + ## HITS:1 COG:no KEGG:NGO0222 NR:ns ## KEGG: NGO0222 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae # Pathway: not_defined # 1 72 1 72 77 62 56.0 5e-09 MTKRRTFLILTILFTLLFIALVTLGAYLLSIQSKQFAVAAFLFAFGAVFAQIGSLALYIR HKARAQIMRSQQTEPH >gi|257257253|gb|ACDX02000004.1| GENE 54 54711 - 55304 457 197 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|71274727|ref|ZP_00651015.1| Ham1-like protein [Xylella fastidiosa Dixon] # 1 190 1 191 200 180 49 3e-44 MFDKIVLASGNAGKLKEFSRLFADLNIEVLPQSQFDTPECPEPYRTFVENALAKARHAAK HSGLPALADDSGICAAALNGAPGILSARYAGANPKSDAANNKRLSDDLADKADKSCYYAC VLVLVRHENDPQPIIAEGIWHGQWQTEAAGTNGFGYDPHFYLPEHNCTAAELAPEIKNAE SHRGQALRELLRKIEAL >gi|257257253|gb|ACDX02000004.1| GENE 55 55362 - 56537 1141 391 aa, chain + ## HITS:1 COG:NMB0665 KEGG:ns NR:ns ## COG: NMB0665 COG0635 # Protein_GI_number: 15676563 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Neisseria meningitidis MC58 # 1 391 1 391 391 777 96.0 0 MTQITFPQAGQLTALPPLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQL ELPNIWGRPVETIFFGGGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEK FQGFKDAGITRLSIGVQSFNDDMLMRLGRVHNGKEALTAINTALKLFDKVNIDLMYALPN QTVQTALDDVQTAIATGATHISAYHLTMEPNTPFGHTPPKGLPQDEAALDIEDAVHGALE GAGFIHYETSAFAKPAMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDY LALMQSQPIEAVERKTVAAADLPFEFMMNALRLTDGVPAAMLQERTGVPAAKIMAQIETA RQKGLLETDPTVFRPTERGRLFLNDLLQCFL >gi|257257253|gb|ACDX02000004.1| GENE 56 56716 - 57105 620 129 aa, chain + ## HITS:1 COG:NMB0662 KEGG:ns NR:ns ## COG: NMB0662 COG0251 # Protein_GI_number: 15676560 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Neisseria meningitidis MC58 # 1 129 1 129 129 209 96.0 1e-54 MSKTIIHTDKAPAAIGAYSQAVRAGDTVYMSGQIPLNPVTMTVVGNGDFRAEARQVFQNL QAVAEAAGGTLGDIVKLNAYLTDLANFAVFNEVMAEFIQEPFPARAAVGVASLPKGVQVE AEAVLVLNA >gi|257257253|gb|ACDX02000004.1| GENE 57 57185 - 58015 1408 276 aa, chain + ## HITS:1 COG:NMA0860 KEGG:ns NR:ns ## COG: NMA0860 COG0639 # Protein_GI_number: 15793830 # Func_class: T Signal transduction mechanisms # Function: Diadenosine tetraphosphatase and related serine/threonine protein phosphatases # Organism: Neisseria meningitidis Z2491 # 1 276 1 276 276 450 76.0 1e-126 MAHYAIGDIQGCFDELTLLLDKINFNHGTDTLWLVGDIVNRGPKSLEVLQFCMEHESSVR MVLGNHDLHLLAVGCGEGTVKRSDTITPILTHPDSKKMLDWLRFQPLLIKGVRHVMVHAG ILPQWTIARAELLASETEAELRGKKYKKFFSKMYGNKPAEWSDELTGYDRLRMIVNVLTR MRALTLKNELDYDYKSTLKKMPTNLRPWFKAPNRQNLSHTIVFGHWSSLGFMNTDNILSL DTGALWGGELTAINLADHSITQVPSLGGLDWKTALK >gi|257257253|gb|ACDX02000004.1| GENE 58 58267 - 59322 1836 351 aa, chain - ## HITS:1 COG:NMB0351 KEGG:ns NR:ns ## COG: NMB0351 COG0176 # Protein_GI_number: 15676266 # Func_class: G Carbohydrate transport and metabolism # Function: Transaldolase # Organism: Neisseria meningitidis MC58 # 1 351 1 351 351 582 93.0 1e-166 MTILSDVKALGQQIWLDNLSRSLVQSGELAQMLKQGVCGVTSNPAIFQKAFAGDALYADE VAALKQQDLSPKQRYETMAIADVQAACDVCLAEHESTGGKTGFVSLEVSPELAKDAQGTV EEARRLHAAIARKNAMIKVPATDAGIEALETLIVDGISVNLTLLFSRAQTLKAYAAYARG IAKRLESGQSVAHIQAVASFFISRVDGALDATLPDHLKGKIAIALAKAAYQDWAQYFGSA EFAALEAKGANRVQLLWASTGVKNPAYPDTLYVDSLIGAHTVNTVPDATLKAFIDHGTAK ATLTEGIDEAQAQLVETAALGIDVETLANRLQEDGLKQFEEAFDKLLAPLA >gi|257257253|gb|ACDX02000004.1| GENE 59 59563 - 60537 1117 324 aa, chain + ## HITS:1 COG:NMB0352_1 KEGG:ns NR:ns ## COG: NMB0352_1 COG0794 # Protein_GI_number: 15676267 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted sugar phosphate isomerase involved in capsule formation # Organism: Neisseria meningitidis MC58 # 1 207 1 207 207 371 96.0 1e-103 MAGNGQYLDWAREVLHTEAEGLREIAAELDENFVLAADALLHCKGRVVITGMGKSGHIGR KIAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKNIT LICITARPDSTMARHADIHITASVSKEACPLGLAPTTSTTAVMALGDALAVVLLRARAFT PDDFALSHPAGSLGKRLLLRVADIMHKDDALPAVRLGTPLKEAIVSMSEKGLGMLAVTDN QGRLKGVFTDGDLRRLFQQRDRFDGLTVDEIMHPSPKTIPAERLATEALKVMQANHVNGL LVTDADGVLIGALNMHDLLMARIV >gi|257257253|gb|ACDX02000004.1| GENE 60 60626 - 61885 1906 419 aa, chain + ## HITS:1 COG:NMA1563 KEGG:ns NR:ns ## COG: NMA1563 COG0144 # Protein_GI_number: 15794456 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA and rRNA cytosine-C5-methylases # Organism: Neisseria meningitidis Z2491 # 1 418 1 418 418 736 91.0 0 MTPIQLDHTAKVLAEMLTFKQPADAVLSGYFREHKKLGRQDRHEIAETAFATLRHYQKIS AALRRPHAQPRKAALAALVLGRSTNISQIKDLLDEEETEFLSGLKARKTEFSDDLHTAAE LPQWLVEQLQKHFNEEEILAFGRSINQAAPLDIRVNTLKGRRDKVLPLLQAESPDAEATP YSPWGIRLKNKIALNKHELFLDGTLEVQDEGSQLLALLVGAKRGEIIVDFCAGAGGKTLA VGAQMVNKGRIYAFDIAEKRLANLKPRMTRAGLTNIHPERISSEHDSRIARLTGKADRVL VDAPCSGLGTLRRNPDLKYRQSPETVAKLLEQQHSILDAAAKLVKPQGRLVYATCSVLPE ENEMQVERFLEEHPEYELLDCAELLAGLKIDLNTGKYLRLDSAKHQTDGFFAAVLQRKE >gi|257257253|gb|ACDX02000004.1| GENE 61 61952 - 62563 666 203 aa, chain - ## HITS:1 COG:NMA0951 KEGG:ns NR:ns ## COG: NMA0951 COG1386 # Protein_GI_number: 15793908 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing the HTH domain # Organism: Neisseria meningitidis Z2491 # 1 196 1 196 200 312 87.0 2e-85 MNEKLPPDALIEAALLTQTEPLNEKSMRELCVPPLSQDKLIDVLAQLKTRWQDRALQLVH THEGWRFQIAQAAFERLGSLQEQRAPRYSRAVMETLAIIAYQQPVTRGDIEGIRGVAVSQ NVMQTLQDRGWIEVIGHRDSIGRPALWATTETFLSDLQLDSLEELPPLTELGELVLPDLV ETPPTGDEEETAEESENAGRLVN >gi|257257253|gb|ACDX02000004.1| GENE 62 62690 - 63481 527 263 aa, chain - ## HITS:1 COG:no KEGG:Bpro_1942 NR:ns ## KEGG: Bpro_1942 # Name: not_defined # Def: hypothetical protein # Organism: Polaromonas # Pathway: not_defined # 1 261 46 299 308 131 32.0 3e-29 MEEAGKMGIYLLADSYKLYVGQTTELRNRLKQHDKGKTFWEKAFALVLNNEFCTRDHLDC LERMTIEQAQLAQRLELENGTEGNRQNHLHDSIRSDCENIFDEIDTLLAVLNQDFFEKTS EQKNHVSLEITHPVERMVPEENQIERSSESNEEIFYCRNVKQGIEARGKYRKDGFLLLRS STLRLDHTPFMEQKTRLPAWKKKMLEAGMLKEQGGVLVLMDDCFIKGRPSASSDWILGKP SNGWIEWKNAEGKTLDELYRKNK >gi|257257253|gb|ACDX02000004.1| GENE 63 63754 - 64374 803 206 aa, chain - ## HITS:1 COG:no KEGG:NGK_0797 NR:ns ## KEGG: NGK_0797 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 1 205 1 205 206 382 98.0 1e-105 MLTPKSCDLFNIPFFQFAQLKKYQPESIPQIKADYKENWQIWQQLIQQVAADLGEPFAPP HIERWCNGWQVRAHFFAYFKYAQYKNSAAILSILLNRRRLSVSLDWHCYKADVSPIALPE YNRWLDDFDTEKYAAFDMWHGAESEYDDYRTVAQQSESDRKLQNGEDFFCIGKHIERDDL GKQDVAKWIVETVEDLLPLYEACHGG >gi|257257253|gb|ACDX02000004.1| GENE 64 64495 - 65004 698 169 aa, chain - ## HITS:1 COG:no KEGG:NMA1732 NR:ns ## KEGG: NMA1732 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_A # Pathway: not_defined # 1 169 1 169 169 329 97.0 3e-89 MNPFETKSVTFAEPIEMLYACHGKVRRFCGQVAMLSDYIAENGCNQIVLQTIRQIAQYFN VAAPLHHEDEEENFFPLLLQYAPQAQESVDELLRQHVSLHGNWDAVAAEFAKLEADNAYI PDAEAFKRFVAGYDVHLAIEEPLFDMGKTFIPKEKLTEIGEIMAARRRR >gi|257257253|gb|ACDX02000004.1| GENE 65 65100 - 65684 810 194 aa, chain - ## HITS:1 COG:NMA1733 KEGG:ns NR:ns ## COG: NMA1733 COG3241 # Protein_GI_number: 15794626 # Func_class: C Energy production and conversion # Function: Azurin # Organism: Neisseria meningitidis Z2491 # 1 194 1 183 183 216 72.0 2e-56 MKAYLALISAAVIGLSACSQEASKPAEPAAQTAPAASEAAPAPAESAPPADAPASEAAST AAAPAAGNCAVTVESNDNMQFNTKDIQVSKACKEFTITLKHTGTQPKSGMGHNIVISKAE DMDGILKDGAAAGADADYVKAGDARVVGHTKLIGGGEETSVTVDPAKLADGSYKFYCSFP GHGALMNGTVTLVN >gi|257257253|gb|ACDX02000004.1| GENE 66 65974 - 66396 343 140 aa, chain - ## HITS:1 COG:no KEGG:NGK_0793 NR:ns ## KEGG: NGK_0793 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 1 138 1 138 140 177 73.0 1e-43 MNLEQLGKRDKRLAGLLQQSQQWRRLDAAVKRILPANLHPHFQTACIEEGRLVLLAANGM AASRLKMILPALVPQLQELDAGIQDVAVKVVPKSPAQPKVNSLHLSGAALESFDAAAAKL EDKHPELAAALAELVRKHSR >gi|257257253|gb|ACDX02000004.1| GENE 67 66554 - 69307 4370 917 aa, chain + ## HITS:1 COG:NMA1735 KEGG:ns NR:ns ## COG: NMA1735 COG0653 # Protein_GI_number: 15794628 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecA (ATPase, RNA helicase) # Organism: Neisseria meningitidis Z2491 # 1 917 1 916 916 1628 90.0 0 MLTNIAKKIFGSRNDRLLKQYRKSVAKINALEEQMKALSDADLQAKTAEFKQRLANGQTL DDILVEAFAVCREASRRVLGMRHFDVQLIGGMVLHNGKIAEMRTGEGKTLVATLAVYLNA LSGKGVHVVTVNDYLASRDAGIMAPLYNFLGLTVGVIIADMQPFDRQNAYGSDITYGTNN EFGFDYLRDNMVTDQYDKVQRELNFAVVDEVDSILIDEARTPLIISGQADDNIQLYQIMN SLPAHLIRQETEEGEGDYWVDEKAHQVILSEAGHEHAEQILIQMGLLQENDSLYSAANIA LMHHLMAALRAHTLFHKDQHYVIQDGEIVIVDEFTGRLMSGRRWSEGLHQAVEAKEGVEI KRENQTLASITFQNYFRLYTKLSGMTGTADTEAFEFQSIYNLETVIIPTNRPVQRKDFND QIFRSAEEKFEAVVKDIEECHKRGQPVLVGTTSIENSELVSNLLQKAGLPHNVLNAKEHE REALIVAQAGKVGAITVATNMAGRGTDIVLGGSLKHQIEAIQSNENLSDKEKAAQIAALE NGWQAEHDQVVAAGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSRFYLSFEDPLLRLF ALDRAAAILNRLAPERGVAIEHGMLTRQIEGAQRKVEGRNFDMRKQVLEYDDVANDQRKV IYHQRNEILNSKDVSDLTKGIREEVISDLVDLYIPPDSMEEQWDIPALESQLAAEFRLHE DIQAWLKADTTLDNQDIKERLIKRVEEEYAAKVELVGKKPMADFERNVMLQVIDLQWREH LAAMDYLRQGIHLRSYAQKNPKQEYKREAFAMFENLWRGIKHQTAALLTSVQIERNTDVE EIAEPAPVGIQTIHSEAPDMEELLGQSQTNLVTEAFDPDGTDFSPEALAAQGQVVHRNDP CPCGSGLKYKQCHGKLS >gi|257257253|gb|ACDX02000004.1| GENE 68 69892 - 71907 2634 671 aa, chain - ## HITS:1 COG:NMA1748 KEGG:ns NR:ns ## COG: NMA1748 COG0008 # Protein_GI_number: 15794641 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Neisseria meningitidis Z2491 # 360 671 262 573 573 610 93.0 1e-174 MLNKDQFADNHFIRTIIEEDLKGGKHEAIQTRFPPEPNGYLHIGHAKSICLNFGLAYIYD GLCNLRFDDTNPEKENDEYVNAIKEDVEWLGFHWAGEPRFASNYFDQLYDYAVGLIKDGK AYVDDLTPEEMREYRGTLTEAGKNSPYRDRSIEENLDLFTRMKNGEFPDGSKTLRLKIDM TSGNINMRDPVIYRIRRAHHHNTGDKWCIYPMYDYTHCISDAIEGITHSLCTLEFEAHRP LYDWVVDNIIVTNDKTRSAINVLSCILSNLQSKYIQLDLGNNINKHIEIDNEISNMRRMI SFQLENLNLESKLNVNILQKLFDISLRSCEGGSLDEEWTRIAELISDYLNLIKEIMSLLS PFPTRPRQYEFSRLELLYSITSKRKLNQLVSEGYVSGWDDPRMPTISGMRRRGYTPEGLR LFAKRAGISKSENIVDMSVLEGAIREELENSAPRLMAVLNPLKVTLTNFEAGKTQSRRAA FHPNHEEMGEREIPVSQTIYIEADDFAENPPKGFKRLTPGGEVRLRHGYVIKCDEVVKDA AGNVVELKCSIDHDTLGKNPEGRKVKGVIHWVSAEHAAEIKVRLYDRLFTVERPDAVRGE DGNYLPFTDFLNPESVKEITAYAEPAAKNLPAESRWQFERLGYFVTDRKDHSSEQPVFNR TVTLKDSWQPK >gi|257257253|gb|ACDX02000004.1| GENE 69 72017 - 72793 891 258 aa, chain - ## HITS:1 COG:NMA1749 KEGG:ns NR:ns ## COG: NMA1749 COG1349 # Protein_GI_number: 15794642 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Neisseria meningitidis Z2491 # 1 256 1 257 257 385 77.0 1e-107 MKPKIQRHEHILTLVREQHFMTVEQLAEALDVTPQTIRRDIQELSESGQLKRYHGGASVG DISGNAAQGKRNHCQNEKNAIARLIAAHIPDNSSLFISIGTTMEAVAAELVKQRKNLRII TNNIYVASITSARTDYTVIITSGVVRPLDGGITGVATVDFINQFKVDYAVMSTHGVESDG SLLDYDYKEVSVMQAMMTNARVRYLGVDHSKFNSNALVRLGDIGSFDKVFTDRVPEAAMQ KVLGDAGVEWLVAEPVPL >gi|257257253|gb|ACDX02000004.1| GENE 70 72954 - 73511 545 185 aa, chain - ## HITS:1 COG:NMA1891 KEGG:ns NR:ns ## COG: NMA1891 COG0778 # Protein_GI_number: 15794777 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Neisseria meningitidis Z2491 # 1 185 1 185 185 308 80.0 3e-84 MDALHLLTTRRSSKKLTAPAPNAEQLEAMLQAATQVPDHGNMRPFRFTVIQSAEGLQRFR EILCRTVTELNFGDDVMRKAERVGNMAPMVIGVTFAPNREVAKPKPEWEQMLSAGCAAYG LQLAASAQGFDNVWITGMWVNSPLLREAFGCSDKDKIIGLMMIGSPMEEGGGAKNTDLEQ FVTTW >gi|257257253|gb|ACDX02000004.1| GENE 71 73748 - 74854 1568 368 aa, chain - ## HITS:1 COG:NMA1894 KEGG:ns NR:ns ## COG: NMA1894 COG1932 # Protein_GI_number: 15794779 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoserine aminotransferase # Organism: Neisseria meningitidis Z2491 # 1 368 1 368 368 681 87.0 0 MSVRTIYNFSAGPAVLPEAVLRTAQQEMLDYNGTGFPVMAMSHRSEMFLSILHHAEQDLR TLLNIPSNYKILFLQGGATTQFNMVAMNLAHGFPSADAVVTGNWSRIAYEQMSRLTDTEI RLAAHGGEQFDYTALPPVETWDIDKNSAFVHFAINETVNGLQYQTVPKLSDDLPPLVCDM SSEILSREFDVSDYGLIYAGAQKNIGPAGATVVIIREDLLDRCPDSIPDVFNYRSHINRD GMYNTPSTYAIYMSGLVFRWLLTQGGVKKIEAINNIKAQTLYNAIDGSGGFYVNRIRPDA RSKMNVVFQTASAELNHRFVLEAELQGLCLLKGYKTVGGMRASIYNAMPLEGVQALADFM SDFQRRYG >gi|257257253|gb|ACDX02000004.1| GENE 72 75212 - 75643 534 143 aa, chain + ## HITS:1 COG:NMA1895 KEGG:ns NR:ns ## COG: NMA1895 COG0779 # Protein_GI_number: 15794780 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 143 7 149 149 268 94.0 2e-72 MDIQTILEKTLPGLGYELVDFELTAQGTLRVFIDKEGGITVEDCATVSNHLSRVFMVEDI DYKNLEISSPGLDRPLKKAADFVRFAGQQAKIKTRLPVDGQKNFIGRIEGCENDTVTLSF DGKTAQIGLDNIDKARLRPEFKF >gi|257257253|gb|ACDX02000004.1| GENE 73 75669 - 77171 999 500 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|17988250|ref|NP_540884.1| transcription elongation factor NusA [Brucella melitensis 16M] # 4 499 9 516 537 389 42 1e-107 MSREMLQLAEALASEKNVEAEVVFQALEFALSTAAKKKADREHMDVRVEIDRDTGEYHTF RRWLIVADEDYTYPDLEKTIEEIQEEIPGTDIQIGDYYEETLPNEGFGRQAAQTAKQIIL QRIRDAEREQNLNEFLAVKEDIVSGTVKRVERHGIIVEVVPGKLDALIPREQMIPRENFR GGDRIRALFLRVDEIGNTGRKQVILSRTSGDFLAKLYEMEVPEIADGLLEIREVARDPGQ RAKVAVKANDQRIDPQGTCIGVRGSRVNAVSNELAGERIDVVLWSSETAEFVMNALSPAE VSRIVIDEDKHAVDVIVAEDQLALAIGRGGQNVRLASDLTGWQLNIMTVEEADERTAAED AAIRDLFTAHLNIDDETADILVEEGFATLEEVAYVPAAELLAIEGFDEEIVETLRNRARD AILTMAIASEEKLEEVSDDMRNLDGVDSDMLRKLAEAGVTTRDDLAELAVDELIEITGVD EEAAKKVILAAREHWFTEEN >gi|257257253|gb|ACDX02000004.1| GENE 74 77171 - 80089 4245 972 aa, chain + ## HITS:1 COG:NMA1897 KEGG:ns NR:ns ## COG: NMA1897 COG0532 # Protein_GI_number: 15794782 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation initiation factor 2 (IF-2; GTPase) # Organism: Neisseria meningitidis Z2491 # 5 972 1 962 962 1238 85.0 0 MGVQMSNTTVEQFAAELKRPVDDLLKQLKEAGVNKNSGSDSLTLDDKQLLNAYLKKKNGN DGGTISIRRKKTEVSTVSGVKVERKRGRSVTIPSPEELAAEAKAKAVAEAQKAEQVEAKD QAAEQAKAEAEAAARAEARAKAEAEAAKLKAAKAAKSEPKAKAEEAKPVEAAEKPVEVQA VENKVDDKPAEPAAQAVQAEDKPAQRSSEKPAEGKTKPKQDKGNKGKDAKKAAKPAAPAA PQPVVSAEEQAQRDEEARRAAALRAHQEALLKEKQERQARREAMKQQTDQQAKPAAEAKA GEQRKPAEKAKAAPADSKAANPARAKKEDRHNRDDDNQSRNAKGKGGKGGRDRNARNGDD ERVRGGKKGKKLKLEPNQHAFQAPTEPVVHEVLVPETITVADLAHKMAVKGVEVVKALMK MGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFLDEGVEAAEAEALPRPPVVTVM GHVDHGKTSLLDYIRRAKVVQGEAGGITQHIGAYHVETPRGVITFLDTPGHEAFTAMRAR GAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNKIDKEAANPERIRQELTAH EVVPDEWGGDVQFIDVSAKKGINIDALLEAVLLEAEVLELTAPVDAPAKGIIVEARLDKG RGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKAVNEAGPSIPVEILGLSDVPNA GEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMGENQAQSLSVIIKADV QGSYEALSGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAFIIGFNVRADASSRKL AENENVEIRYYNIIYDAIDDVKAAMSGMLAPEEKEQITGMVEIRQVISVSKVGNIAGCMV TDGVVKRDSHIRLIRNNVVIHTGELSSLKRYKDDVKEVRMGFECGLMIKGYNEIMEGDQL ECFDIVEVARSL >gi|257257253|gb|ACDX02000004.1| GENE 75 81366 - 81662 71 98 aa, chain - ## HITS:1 COG:mlr5757 KEGG:ns NR:ns ## COG: mlr5757 COG2801 # Protein_GI_number: 13474791 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Mesorhizobium loti # 11 89 173 251 263 62 40.0 2e-10 MVNYKGSANHAFGVACYENGIGQKFTRVARPQTNGKAERVIRTLMKMWHEKQLFDSPEHR RKELCRFVNFYNTVKPHRSLNGDTPFEVLQAYFSQPVV >gi|257257253|gb|ACDX02000004.1| GENE 76 81718 - 82566 646 282 aa, chain + ## HITS:1 COG:slr1357 KEGG:ns NR:ns ## COG: slr1357 COG3335 # Protein_GI_number: 16330163 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Synechocystis # 1 259 1 261 282 150 35.0 3e-36 MAYSIDFRQKALDHYEQHGNISQTARTFRITNRTLYQWIALKKETGSLQHRTKGGNSERI DKEELRRYVAEHPDAYQYEIAQHLGCTASNVGYLLKTLKITRKKKQPSTKNKTSKKVTAY QKQLEQYSEMPKVYLDETGFDTFYYRPYAYALRGQIVKARISGKRYERMSLVAACGDREL VAPMIYKGTMDSSLFEAWFGQFLLKELKEPSVIIMDNARFHRMAVLREMAQRAGHIILPL PPYSPELNPIEKVWANIKRHLRKVMSGCLSFEQALLGIFCFV >gi|257257253|gb|ACDX02000004.1| GENE 77 82695 - 84935 2325 746 aa, chain + ## HITS:1 COG:FN0417 KEGG:ns NR:ns ## COG: FN0417 COG3587 # Protein_GI_number: 19703759 # Func_class: V Defense mechanisms # Function: Restriction endonuclease # Organism: Fusobacterium nucleatum # 3 424 156 596 997 350 48.0 7e-96 MRYAEYSSTRLSDLRAFAVNDHIEILVINIQSFEKDGNVINKVNESGEAPIKFIQETCPI VIIDEPQNMETEGRLNALESLNPLFTLRYSATHKNPYHKVYSLNPVQAYNLKLVKQIEVL PVLAENDVNGAFAELLEVKQAAKGRLKADLNIHYQDKKETKKKKVSVKSGDDLFEKSGGH EAYRHGFIIDGMDFENQELAFSSGKTITRGGDGDAVRDEIMKNQIRETVREHLAKEKRLN PLGIKVLSLFFIDRVENYRAADGTAGKFALWFEEIYRELSGSTDTAGVHDGYFSQDKKGR LKNTDGTTQADNDTYRLIMRDKETLLSFSSPLRFIFSHSALKEGWDNPNVFQICTLNETR SPLKKRQEIGRGLRIAVNQKGRRVRDEDENEKVNILTVVPNESYESFAANLQKEYEDECG IKFAAENIKDGNKKKKQLFRKDFPLDPEFQEIWDRLKYKTRYRVHFDTEELIKQASVAVA GLPEIQKPKIRIQKAHLKQISTKGIETVETKSYSRDMDVQWEIPDILSEIQRKTGLTRRT VYEIITQSGRLKDVAGNPQRFIDLAAEVINRSLYALMAAGIEYEQTGEVYDQKLLEDMER EGIEFYENSFTFEVGKPQKTICENYIPLDSGTEKAFAQNCEDYDADNEGGVAFYFKLPGW FKIPTPLGNYNPDWAVVKQVQDKVYFVAETKNTGKGIQAGVDAGKLRENERLKIECGKQH FAALDGLKYRETDSVGGLEAGLSPDI >gi|257257253|gb|ACDX02000004.1| GENE 78 85248 - 85703 351 151 aa, chain + ## HITS:1 COG:NMB2140 KEGG:ns NR:ns ## COG: NMB2140 COG2259 # Protein_GI_number: 15677953 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis MC58 # 5 148 3 146 149 191 80.0 5e-49 MKTNITAPWQSALGLLVLRLFAAYEFWESGMQKWSGENWFAEINDQFPFPFYLLPDSVNW NLAMWAELVFPVLLLLGLATRLSALGLIIVTGVAWAAVHAGAGYNVCDNGYKMALIYIVV LIPILLQGAGCLSLDALLKKRFCPKCRVGNQ >gi|257257253|gb|ACDX02000004.1| GENE 79 85785 - 86090 319 101 aa, chain + ## HITS:1 COG:NMA0227 KEGG:ns NR:ns ## COG: NMA0227 COG3767 # Protein_GI_number: 15793249 # Func_class: S Function unknown # Function: Uncharacterized low-complexity protein # Organism: Neisseria meningitidis Z2491 # 1 101 1 102 102 60 76.0 7e-10 MKKNVAAALAGALSLSLAAGVVAADKPVSSKAGVQKSAQGSCGAAKAAEGSCGAAASKAG EGKCGEGKCGSTVKKAPAKNAKAAKAKAVEGKCGEGKCGSK >gi|257257253|gb|ACDX02000004.1| GENE 80 86198 - 87040 1050 280 aa, chain + ## HITS:1 COG:NMA0228 KEGG:ns NR:ns ## COG: NMA0228 COG3220 # Protein_GI_number: 15793250 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 280 1 280 280 553 96.0 1e-157 MIQHAGLGYRRDLAEDFLSLSDDSPIHFIEAAPENWLKMGGRARKQFDRVAERLPLALHG LSMSLGGQAPLDTALIDGIKEMMRRYDCTFFSDHLSYCHDGGHLYDLLPLPFTEEMVRHT ARRIREVQDRLGCRIAVENTSYYLHSPLAEMNEVEFLNAVAREADCGIHLDVNNIYVNAV NHGLLSPEAFLENVDAERVCYIHIAGHDVETPELLIDTHGAAVLPTVWDLLELAYTKLPT IPPTLLERDFNFPPFAELEVEVAKIAEYQTRAGKEYRRAA >gi|257257253|gb|ACDX02000004.1| GENE 81 87030 - 87716 822 228 aa, chain + ## HITS:1 COG:NMA0229 KEGG:ns NR:ns ## COG: NMA0229 COG3219 # Protein_GI_number: 15793251 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 226 1 226 248 308 68.0 5e-84 MQPETSAQYQQRFAQAIREGEAADGLPQDRLNVYIRLIRNNIHSFIDRCYTETPQYFDSG EWGRLKEGFIRDARAQTPYFQEIAGEFLQYCQSLPLSDDLLALMDFEHTQLLAEVVQTNS QASSADSDDLAYTLSPTAFVRRYHYDVTDELQAVETAVLVWRDSEDDVMYQTLDDFDALL LETLADTPTSLNGLQAMLAEFMSSENGWQDALTQKWSDWLEQGILVVA >gi|257257253|gb|ACDX02000004.1| GENE 82 87859 - 89310 2242 483 aa, chain - ## HITS:1 COG:NMA0291 KEGG:ns NR:ns ## COG: NMA0291 COG0552 # Protein_GI_number: 15793308 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal recognition particle GTPase # Organism: Neisseria meningitidis Z2491 # 1 483 1 421 421 559 74.0 1e-159 MFSFFRRKKKQETPAQEETRIQETAAEAVERAETTVSQTIETVQENIGEKAEELTAAVET AVESAKERAEEIRETVVEHVSETVEHVREAVSETSSETVEQVEERVEAVSETVAENVSAA VEHVHEAVSNRSSETAEAVETVEIQAEAAPVISEGHSVQTLENTAVATSSETSKPSETEP KLGWAARLKQGLTKSRDKMAKSLAGVFGGGQIDEDLYEELETVLITSDMGMEATEYLMKD VRNRVSLKGLKDGNELRGALKEALYDLIKPLEKPLVLPETKEPFVIMLAGINGAGKTTSI GKLAKYFQAQGKSVLLAAGDTFRAAAREQLQAWGERNNVTVISQTTGDSAAVCFDAVQAA KARGIDIVLADTAGRLPTQLHLMEEIKKVKRVLKKAMPDAPHEIIVVLDANIGQNAVNQV KAFDEALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGVGEGIDDLRPFNARAFVDA LLD >gi|257257253|gb|ACDX02000004.1| GENE 83 89456 - 91024 2333 522 aa, chain + ## HITS:1 COG:NMA0290_1 KEGG:ns NR:ns ## COG: NMA0290_1 COG0526 # Protein_GI_number: 15793307 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Neisseria meningitidis Z2491 # 1 196 1 196 196 388 95.0 1e-107 MKPRTFFSLCAKFGCLFALGACSPKIADAEAATVPHTLSTLKTADNRPASVYLKKDKPTL IKFWASWCPLCLSELGQTEKWAQDKRFSSANLITVASPGFLHEKKDGDFQKWYAGLNYPK LPVVTDNGGTIAQSLNISVYPSWALIGKDGDVQRIVKGSINEAQALALIRDPNADLGRLK NAFYKPDTQKKDSKIMNTRTIYLAGGCFWGLEAYFQRIDGVVDAVSGYANGKTKNPSYED VSYRDTGHAETVKVTYDADKLSLDDILQYYFRVVDPTSLNKQGNDTGTQYRSGVYYTDPA EKAVIAAALKREQQKYKQPLVIENEPLKNFYDAEEYHQDYLIKNPNGYCHIDIRKADEPL PGKTKAAPQGKGFDAATYKKPSDAELKRILTEEQYQVTQKSATEYAFSHEYDHLFKPGIY VDVVSGEPLFSSADKFDSGCGWPSFTRPINAAAVTEHDDFTYNMRRTEVRSHAADSHLGH VFADGPQDKGGLRYCINGASLKFIPLEQMDAAGYGALKGKVK >gi|257257253|gb|ACDX02000004.1| GENE 84 91347 - 92135 1087 262 aa, chain - ## HITS:1 COG:NMB0271 KEGG:ns NR:ns ## COG: NMB0271 COG0500 # Protein_GI_number: 15676195 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Neisseria meningitidis MC58 # 1 261 1 261 262 371 70.0 1e-103 MNPQDKRWQIHRHLAQDTDERLQIVRNAPKRVLLVGADADISRSLLAARYPNAVFEEYDP RADFLQTAAAARKSGFWQKLTGKTVAQHCQALTDPLPEAAADMLWANLSLPRAGEILPVL KNWANALKTDGLLFFTHFGRDSLTELTGRLKNAGITCETPTLIDMHDLGDMLADNGFYDP VTDTAKLELSYRKAATFRQDMETLGLWHALKFSDAQAAEAFVDKIFETEGGLTVTLETVY GHAVKKLTLPEGENVVRFYPKG >gi|257257253|gb|ACDX02000004.1| GENE 85 92643 - 93389 959 248 aa, chain - ## HITS:1 COG:NMA2216 KEGG:ns NR:ns ## COG: NMA2216 COG0596 # Protein_GI_number: 15795085 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Neisseria meningitidis Z2491 # 1 248 10 257 312 355 75.0 4e-98 MPHSAKKVYLIHGWAANRHVFDDLIPRLPVDWDIRALDLPGHGDAPFAENFNIAAIAEAF AEEIDTPAHILGWSLGGLVALHLAARRPDKVRSLCLTASFARLTADADYPEGLSNPALGK MVGAFRQDYAKHIKQFLQLQLLHTPNAAEIIGNIMPDLSRHGAPPALQAALDAVNQADAR PLLSSIQAPSLLVFGQKDAITPPRIGEYLNRHLTDSELVLMEKAAHAPFLSHADEFAERY RGFVEKVV >gi|257257253|gb|ACDX02000004.1| GENE 86 93643 - 94140 283 165 aa, chain + ## HITS:1 COG:NMA2217 KEGG:ns NR:ns ## COG: NMA2217 COG1040 # Protein_GI_number: 15795086 # Func_class: R General function prediction only # Function: Predicted amidophosphoribosyltransferases # Organism: Neisseria meningitidis Z2491 # 1 165 77 241 241 246 70.0 1e-65 MWASLYYEPPVSSMIRALKHLSDLGMSRPLAELMRRHAPDWLETERFDFVLPVPLSKERR LHRGFNQSEELADILSEHYGWTLLPRRTIFRRHREPQSTLKSADRVRNIKNAFEINGHIS KNCNILLIDDVFTTGSTLDELARTLKKSGAGKIFCWSLARPPMKK >gi|257257253|gb|ACDX02000004.1| GENE 87 94204 - 94668 350 154 aa, chain + ## HITS:1 COG:NMB0268 KEGG:ns NR:ns ## COG: NMB0268 COG0219 # Protein_GI_number: 15676192 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted rRNA methylase (SpoU class) # Organism: Neisseria meningitidis MC58 # 1 154 1 154 154 285 87.0 2e-77 MFTIVLYQPEIPPNTGNIIRLCANTGADLHLVKPLGFPLDSAKMKRAGLDYHEFAKLTVH ENFEDCLKALEGRRIFALTTKGKTRPDKVSFVEGDVFLFGPETRGLPAEILDTLPEGQKL RLPMKLGSRSMNLSNTVAVILFEAWRQNGYAGGV >gi|257257253|gb|ACDX02000004.1| GENE 88 94816 - 95541 1035 241 aa, chain + ## HITS:1 COG:NMA2219 KEGG:ns NR:ns ## COG: NMA2219 COG0797 # Protein_GI_number: 15795088 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipoproteins # Organism: Neisseria meningitidis Z2491 # 1 236 1 234 239 311 75.0 8e-85 MTLSKTTLFSTLTAVAISILSIHSASADSIVRAEKLSSSANRSYKVAGKRYTPMTKVSNF SQTGNASWYGSQFHGRKTSSGERYNMNALTAAHKTLPIPSYARVTNTKNGKSVIVRVNDR GPFHGNRVIDVSKAAAQQLGFINQGTAHVKVEQIVPGQSAQAYNGQDIFVDLKSFGTERE AQAYMNQAAVNLSYGKMNPKVSMEKRDYEYVVKMGPFTSQERAAEAEAKARGLIQAASLS L >gi|257257253|gb|ACDX02000004.1| GENE 89 95838 - 96170 556 110 aa, chain + ## HITS:1 COG:NMB0037 KEGG:ns NR:ns ## COG: NMB0037 COG2824 # Protein_GI_number: 15675977 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism # Organism: Neisseria meningitidis MC58 # 1 110 1 109 109 182 85.0 1e-46 MSLPPCPQCQSEYTYEDGSQYICPECAFEWTENDGEAAEETLSVKDANGAVLQDGDTVVL IKDLKVKGSSMVIKQGTKVKGIRLQEGDHNIGCKIDGSAMNLKSEFVKKA >gi|257257253|gb|ACDX02000004.1| GENE 90 96334 - 96852 645 172 aa, chain - ## HITS:1 COG:NMA1936 KEGG:ns NR:ns ## COG: NMA1936 COG3245 # Protein_GI_number: 15794819 # Func_class: C Energy production and conversion # Function: Cytochrome c5 # Organism: Neisseria meningitidis Z2491 # 53 172 160 279 279 138 70.0 6e-33 MNKLLIAAMMMAALTACSQEAKQETKEAATAVASDVKDATASAVDTVASAAQEAASKVEE AADKAASEVKEAAPAEAKPEEKPADASSAKVDGKAVFEANCKMCHGGTIPGAPVVGKNDD WAPRIKQGKETLHKHALEGFNTMPAKGGNTSLSDDEVKAAADYMANQSGAKF >gi|257257253|gb|ACDX02000004.1| GENE 91 97264 - 97434 245 56 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261364328|ref|ZP_05977211.1| ## NR: gi|261364328|ref|ZP_05977211.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 56 1 56 56 96 100.0 7e-19 MNKCRKAAYLLSKKQDETRLTVPERVFLGSHLLICPHCREYKKQLDLIHKAMKKMF >gi|257257253|gb|ACDX02000004.1| GENE 92 97453 - 98043 807 196 aa, chain - ## HITS:1 COG:NMB2144 KEGG:ns NR:ns ## COG: NMB2144 COG1595 # Protein_GI_number: 15677957 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Neisseria meningitidis MC58 # 1 189 1 189 195 294 73.0 8e-80 MPFPALTDAELAESRKLLLRFARIQLPDRPDLVEDLVQETMLSAYRAAEGFKGDAQVGSW LFAILKNKITDCLRQLGRQREVFATPAEEMLDEIFEERFASDGHWTADGHPQTWASPEKT LDNKEFREILQTCLYQMPENTARVFTMKEILGFSSDEIREQCGISTSNYHTIMHRARETL RQCLQIKWFGNAEHAG >gi|257257253|gb|ACDX02000004.1| GENE 93 98247 - 98513 412 88 aa, chain + ## HITS:1 COG:no KEGG:NLA_0190 NR:ns ## KEGG: NLA_0190 # Name: not_defined # Def: hypothetical protein # Organism: N.lactamica # Pathway: not_defined # 1 88 1 88 89 156 90.0 2e-37 MAKKFPIFPKAPERICWGCDKYCKDDDLQCGNGCERIQHPIELDGREWYKKGDWSNLLSE EQQIELGLKEAPKPAKPHIKLPLRNKTA >gi|257257253|gb|ACDX02000004.1| GENE 94 98709 - 100859 3250 716 aa, chain + ## HITS:1 COG:NMB0287 KEGG:ns NR:ns ## COG: NMB0287 COG1199 # Protein_GI_number: 15676210 # Func_class: K Transcription; L Replication, recombination and repair # Function: Rad3-related DNA helicases # Organism: Neisseria meningitidis MC58 # 1 716 1 716 716 1346 92.0 0 MLTDLEKNAIRDHYQNIGKNLPGFRPRASQREMIAAIANAFSRTLTREEGGEPPKREGES IAVIEGPTGVGKSLAYLLAGGIMAQTRGKRLIVSSATVALQEQLVDRDLPFLVEKSGLEL TFALAKGRGRYLCPYKLYQLTQSNAQQNLLGFEAPAVLWDSKPKPEELKLLRDIADEFSA RRFNGDRDTWPEKIDDTIWMKVNNDNYGCLKAACPNRPECPFYLARDTLETVDVVVTNHD LLMVDISMGGGVILPDPENSFYCIDEAHHLPKKALSQFAAEHSWNQAVWALEKLPQVTGK IAALTDKGELANLADEAAAALLESLHEWQFHLAEEPSLSLGSSENDRRTNSEPTWLWEDG KIPEGLETTVSNTAIAARSLYKHINSLNDALSAARRDKDQNSAQIDRLSTEFGVFRARVE QITATWDLLSTVPLEGEEPLAKWITRRADDKNDYIFNASPISSASHLANSLWRRAAGAVL TSATLQSLGSFNLILRQTGLQWLPETTTLALESPFDFDAQGELYIPPVHASPKDPAAHTA AIVEWLPKLISPTEAIGTLVLFSSRKQMQDVALRLPDDYLPLLLVQGELPKAVLLQKHHQ AIEEGKASIIFGLDSFAEGLDLPGTACVQVIIAKLPFAMPDNPIEKTQNRWIEQRGGNPF IEITVPEAGIKLIQAVGRLIRTEQDYGRVTILDNRVKTQRYGQQLLASLPPFKRIG >gi|257257253|gb|ACDX02000004.1| GENE 95 100929 - 102698 2335 589 aa, chain - ## HITS:1 COG:RSc0925 KEGG:ns NR:ns ## COG: RSc0925 COG1960 # Protein_GI_number: 17545644 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Ralstonia solanacearum # 1 575 1 579 594 444 45.0 1e-124 MSYTAPVNELRFGIRVHGRLDEILQLPHAEGLDAETADAVLDEAARFASEQWADTNRTGD LHGAGFSDDLITTHPDLARAYYDFCEAGWAGLRAPAEFGGQGLPAVVSAACEEMWCAANL ALSLMPMLTLGAVDALFKHGSEEQKQIYLPKMCSGEWAGTMNLSEPQAGSDLNHIATRAV PKENGAYALSGQKIFITWGDQEMTENIVHLVLARLPDAAPGVQGVSMFIVPKYLVNADGS LGGRNGVRAIGIEHKLGIHASPTCTMEFDNAEGYLVGRAGKGLAYMFTMMKTARLNVGIE GHAVAERAYQNALAYAKERVQGRDEADGSDDVAIIRHPDVRRMLLIQKATLAAQRALYLR AAALTDFAAACPDNVLRKEAERELDFLIPIVKAWPTDNGVVLTNLAVQIYGGAGYVEESG VAQYLRDVRITPIYEGTNGIQAADLAGRKTTGKNGALPLKLLAEGKDLADKLAAAEPAAA QQLAQAIETAEQSIARMVGYADRPALAAAASNAYLQQMGLTLGAIGLARAYLAAESARTE DADGFGSGFYTAQQHNARVYCAHVLPQVYACAAQIENAQALLDVPLELY >gi|257257253|gb|ACDX02000004.1| GENE 96 103038 - 104900 2492 620 aa, chain + ## HITS:1 COG:NMB0282 KEGG:ns NR:ns ## COG: NMB0282 COG0557 # Protein_GI_number: 15676206 # Func_class: K Transcription # Function: Exoribonuclease R # Organism: Neisseria meningitidis MC58 # 1 618 1 618 626 1156 95.0 0 MNIFYEESGQFKVAAIVQKNDATYQVDTQHGKRTKVKANNVFAEFDGDMAAFLENAHAQA ADIDTDLLWEVCGEEEFSAEAIAEEYYGHAPTKTELAATLIALYAAPMYFYKKAKGVFKA APEETLKQALAAIERKKQQDAQIDAWAEALKRGEMPSEIASDLKTILHAPDKQSLTYKAF TKAADALKTSAYELAKKTGGITSIPQYLQDGFEIKYFPKGTGFPDLPLPEMPDLPEADVT AFSIDDESTTEVDDALSLTDLGNGMKRVGIHIAAPSLAIKPGDKMEKNIMERLSTVYFPG GKITMLPENWIAAFSLDAGAHRPAVSIYFDVDSEFNVGEPTCKIEAVNIAENLRIQTIEP HFNAETGLDEAGEMMFAHHQDLIWFYQFAVALQKARGKYEPDRAPQYDYSIELDEEGKVS VVRRERGSPIDMLVSEMMILANSTWAQMLHDNDLPGLFRVQPAGKVRMSTKSEPHIGMGV QHYGWFTSPLRRAADYINQKQLLSLIDDTAEPLFQQSDAELFAALRDFDTAYTAYADFQR QMEAYWSLVYLQQQGTSELTATILKEDLVRIEGLPLVTRATGIPFDALPKTQVLLKITEL DPEKQFIALNYVKAVAPAVA >gi|257257253|gb|ACDX02000004.1| GENE 97 105100 - 105966 1342 288 aa, chain - ## HITS:1 COG:NMB0263 KEGG:ns NR:ns ## COG: NMB0263 COG1162 # Protein_GI_number: 15676187 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Neisseria meningitidis MC58 # 1 286 20 305 307 500 87.0 1e-141 MTDTAQIITSYGRRYIVRTPDGKTYEASTRKKRVDFACGDRVHIQNINAEQAVIEDYLPR ESLLYRQDAWKTKLIAANVTQLLIVTAAVPSPSEALLQRALLAAEAAGIQAVIILNKADL PETALWREKLKFYETLGYPVIETRALENADILRPVLQGHTNILLGQSGMGKSTLTNALLG NQTARTGDISTALDSGKHTTTHAQLYDLNEETQLIDSPGLQEFGLHHLEAADLLQYFPDL SHLVGQCRFHNCTHRAEPGCAVKAAAEAGEAKPERIEFLQRITDELLR >gi|257257253|gb|ACDX02000004.1| GENE 98 106185 - 106883 720 232 aa, chain - ## HITS:1 COG:NMB0283 KEGG:ns NR:ns ## COG: NMB0283 COG1611 # Protein_GI_number: 15676207 # Func_class: R General function prediction only # Function: Predicted Rossmann fold nucleotide-binding protein # Organism: Neisseria meningitidis MC58 # 2 213 7 205 210 259 60.0 2e-69 MLPDEARREIQARESYHVLKIISEFVEAGEELRAIQPAVSIYGSARTPENHPDYEFTLRL ARKLSDAGFSVISGGGPGIMEAANKGAFAGASPAVGLNIVLPHEQKANPYQDLSIKFQHF FPRKVMFVKHAVAYVVMPGGFGTLDELFESLTLVQTGKTPDRPIILVGKDFWSGLLDWIR KELLGRGLISEADMDLIRLIDGEDEIIEEIFAHYENRLEDFSEGVNAWSFGL >gi|257257253|gb|ACDX02000004.1| GENE 99 107119 - 107826 979 235 aa, chain + ## HITS:1 COG:PM0479 KEGG:ns NR:ns ## COG: PM0479 COG0564 # Protein_GI_number: 15602344 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthases, 23S RNA-specific # Organism: Pasteurella multocida # 2 234 3 236 243 291 63.0 5e-79 MLEILYRDSRTIAVNKPAGMLVHRSWLDRHETQFVMQTLRDQIGQHVYPAHRLDRPTSGV LLFALDPEAARLLTQQFEQKTTRKTYWAIVRGYLPDDGLIDYPLKYQPDKIAESQTEATL QEAQTQYRCLARTELPFQSAARYPTSRYSWAELIPHTGRKHQLRRHMKHIFHPIVGDTNY GDLRQNHATAAHLGTTRLMLHARSISFQSIENGETLTVCADTDESWRIWLDAFEA >gi|257257253|gb|ACDX02000004.1| GENE 100 108062 - 109432 2327 456 aa, chain - ## HITS:1 COG:NMB0284 KEGG:ns NR:ns ## COG: NMB0284 COG0015 # Protein_GI_number: 15676208 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate lyase # Organism: Neisseria meningitidis MC58 # 1 456 1 456 456 847 93.0 0 MINPIAALSPLDGRYAKSVEALRPIFSEYGLMRARVKVELSWLKALAAEPKITEIPAFSD FTLAEIDKVIENFSLEDAAAVKAIEATTNHDVKAIEYWLKERFAGVPEVAAASEFIHFAC TSEDINNLSHALMLQEARETVILPKLAEIIEKLTGMAHDLAAVPMMSRTHGQPATPTTLG KETANIVYRLQRQFKNLQAQEFLGKINGAVGNYNAHMVAYPDIDWETHCRNFVEISLGLT FNPYTIQIEPHDYMAEFFQTLSRINTILIDFNRDVWGYISLGYFKQKVKAGEVGSSTMPH KVNPIDFENSEGNLGMANAVLGFLSEKLPVSRWQRDLTDSTVLRNMGVGVGYAVLGFAAH LRGLNKLEPNPAALAADLDATWELLAEPIQTVMRRHGVANPYEKLKDLTRGKGGITPEVL KVFIESLEIPAEAKSQLLALTPALYIGKAEELAKRI >gi|257257253|gb|ACDX02000004.1| GENE 101 109533 - 110126 361 197 aa, chain - ## HITS:1 COG:NMB0004 KEGG:ns NR:ns ## COG: NMB0004 COG1434 # Protein_GI_number: 15675952 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis MC58 # 3 154 9 167 214 62 32.0 4e-10 MLKKTLVFILVLFFTAALLPLWIMWRDFWVSRLDADTVRPADAAVVLSTRAYEGGRLNPC LVARVEAAVELYRARKVKKLVMTGGVSRDLQSSAGNMQMIAEKMGVSKADIIQEREAGNT FENIVFSRKFIENSPRVVIVSAGFHLARARMMADRQWQGHDIQVYAAPFCSEPYGGYGFT VLRESAAFVKNALKGRL >gi|257257253|gb|ACDX02000004.1| GENE 102 110546 - 110929 253 127 aa, chain - ## HITS:1 COG:no KEGG:Dd586_2170 NR:ns ## KEGG: Dd586_2170 # Name: not_defined # Def: hypothetical protein # Organism: D.dadantii_Ech586 # Pathway: not_defined # 1 127 1 130 132 89 38.0 4e-17 MNLYGKTAVKAVELFAYTHDIKKAWTEAVQEFTNSYSARVKGCPKNAFFGLCYAGKIKGI SIQTPQEKESKNAEYAILAIHLLKKDMSWANKKAELWAEIQKIIGEEKKHNSQLDVVIAL WNEGLIQ >gi|257257253|gb|ACDX02000004.1| GENE 103 110930 - 111118 222 62 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261364340|ref|ZP_05977223.1| ## NR: gi|261364340|ref|ZP_05977223.1| assemBly factor CBP4 [Neisseria mucosa ATCC 25996] assemBly factor CBP4 [Neisseria mucosa ATCC 25996] # 1 62 1 62 62 70 100.0 3e-11 MFNSRKARILALAEQQKQQIARENQEQKHRKRLKQQERETALYEEAYQNAQEVNMFVKCW TQ >gi|257257253|gb|ACDX02000004.1| GENE 104 111200 - 112423 2007 407 aa, chain - ## HITS:1 COG:NMB2133 KEGG:ns NR:ns ## COG: NMB2133 COG3633 # Protein_GI_number: 15677946 # Func_class: E Amino acid transport and metabolism # Function: Na+/serine symporter # Organism: Neisseria meningitidis MC58 # 1 405 1 405 409 505 74.0 1e-143 MASGNPLLNAVNRIGLVPQIIIGLMLGVLVGTISPKAGMNVGLLGELFVGALKAVAPVLV FVLVTAALVQYRKGGEAKIKPIIILYLFGTFAAAAVAVAASMAFPTTLVFKDIASSTLAP PSGITQVLKELLMKLVSNPINAIAQANYIGILAWALVLGSALRHHGSDTTRQVVSDLSEA VTTVVQWVIRFAPLGIFGLVSQTVAETGFAAFLSYGRLLAVLLGSMAFIALVVNPLIVWS QTRKNPYGLVFTCLRESGLYAFFTRSSAANIPVNMALAKKLGLHEDTYSVSIPLGATINM AGAAITITVLAMAAAYTKGIVVDYPTALLLSLVATVGACGASGVAGGSLLLIPVACSLLG IDNDFAMRVVGVGMIIGVIQDSAETALNSSTDVLFTAAADLGSRRKD >gi|257257253|gb|ACDX02000004.1| GENE 105 112723 - 114561 2610 612 aa, chain + ## HITS:1 COG:NMA0296 KEGG:ns NR:ns ## COG: NMA0296 COG0729 # Protein_GI_number: 15793311 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein # Organism: Neisseria meningitidis Z2491 # 1 612 8 615 615 902 71.0 0 MTRLTSPILIVSLALAYGHAAAADLPRAEDYEPIPGFKQGGQSEQADKVGKLTPKFPVKI ETKNSEVKSMLEEYLPLITQQQDEELDKEQVGFLAEEAPDNVKTMLKTKGYFNGSVNVQD NGSSYTVAVNPGPRTKIDNVSVAILGDILSDDNLAEYYQKAMLNWQQPVGEYFDQDGWSS SKTSVLSAVTRKKYPLAKLGNTQATVNPNNNTADLNVIVESNRPIYFGDFEITGTRRYPD NVVAGLARFKPGAPYDLDLLLDFQQALEQNGHYSGASVQADFDRLQGDRVPVKVNVTEVK RHKLETGIRYDSEYGLGGRIGYDYYNLFNKGYIGSVVWDMDKYETTLAAGISQPRNSEGK YWTTNTSYNRSTTQNLEKRALTSGIWRVRDRNSIESRLGIEFITEERKVPDTNYDLGRSH ATMLTASWKRQNIETELRPENGYYLDGKVGVTLGKLLSSTAMARATARAGYFYTPENKKL GTFIVRGQAGYVYAHEGKDVPSSLMFRTGGASSIRGYELDSIGLEGPKNSILPDRALLVG SLEYQFPITKSVSGAIFHDVGDVTSNFKNMSMQHGTGVGVRWFSPVAPFSFDLAYGHQDK KLRWHISLGTRF >gi|257257253|gb|ACDX02000004.1| GENE 106 114645 - 115490 976 281 aa, chain + ## HITS:1 COG:NMB0042 KEGG:ns NR:ns ## COG: NMB0042 COG0668 # Protein_GI_number: 15675982 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Neisseria meningitidis MC58 # 3 277 6 280 282 392 74.0 1e-109 MNFDLENLSSFSGWERLVEIGMAFGTNLVAALAIFFVGRWIASRLVILMKAALTRAKVDR TLVSFLGNVANVGLLILIIIAALGKLGIPTTSVTALIGGAGLAVALSLKDQLSNFAAGAL IILFRPFKVGDYIKVNGFEGVVSEIKMVQTALSTPDNEEVILPNSVVMSNSIVNRSSMPL CRVQVVVGVDYACDLKAAKAAVLKAATEHPLCVQTPGKEAVTFITNLGDSAIEITLWAWT NEADLGAFRFGLNEQVVENLRAANINIPFPQRDVHIIQKQG >gi|257257253|gb|ACDX02000004.1| GENE 107 115679 - 116173 509 164 aa, chain + ## HITS:1 COG:PA1329 KEGG:ns NR:ns ## COG: PA1329 COG3193 # Protein_GI_number: 15596526 # Func_class: R General function prediction only # Function: Uncharacterized protein, possibly involved in utilization of glycolate and propanediol # Organism: Pseudomonas aeruginosa # 25 160 3 138 143 92 39.0 2e-19 MRGIKSVALLCTLALGAPAFSAGLTKTLPGDLTTAQAQAVVQASMKKAREIKVPMNIAVM DAGGNLKAFARMDDAFIGSIDIAQKKAKTARYFNMSTRDLGKASQPGGELYGIEVTNDGL VIFPGGVLLVDKNGVIVGSVGVSGGSVDEDESVAKAGAAVLSGR >gi|257257253|gb|ACDX02000004.1| GENE 108 116629 - 120837 5100 1402 aa, chain + ## HITS:1 COG:NMB2135 KEGG:ns NR:ns ## COG: NMB2135 COG2911 # Protein_GI_number: 15677948 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 1 1386 17 1397 1405 1723 64.0 0 MSETAVQETQETPNSVPTSSETQSTPPKRKRRWLRGLLLTLVVLVCALAGFIAWLVGTES GLRFGLYKIPSWFGVKIASETLEGTLVKGFHGDKWMIETDGADVKISAFRFDWEPSELFQ RSLHITEIVAGDIAVVPKPTPPKEKKPSKGLPESIDLPMLVFVDRLETGRLSVGKNFDKQ TVYLDHLNAAYHYDQKEHRLDLKALDTPWSNSTGSAVVGLEKPFALNTTIQTKGELEGET IEGKARLWGSLQDVQTEILLDGDNVHLSAKSTVHPFAASLDKMIGEVLIKGFNINPTAFL PSLPKANLTFDATVVPSFTHGIALDGSLDLENKAAGFADDKAIPVRNILADFTINDNGVV TVQESEIGLLEEGSFNVAGTVDTVKNALALKINVNNLVSDDLVRTNVAGQWNGFIGVKGE TSSPAVDWNLESSNAQLSGLLSFATDRKLGQRTLKLDRVRVAPQNGGELTAQGSLELFKD RLLKLDISSKAFNPSRLDPKLPAGSVNGTINLSGELAKEKFAGKMQFAPSTLNNVPLSGK ADVVYESGHLPRALTDLRLGNNIVKTNGSFGKKGDRLNLDITAPDLSRFGFGLGGLLNTR GYISGDLKGGLKTYEADLSGEARALRVGDAVNIRMLDFKLKGTPDINRPLAADIKGSHIA LSGGATVIDAVNLSLNGTGAQHRIHGSSSMALDGKPYKLEVNAAGGLNKDFNQWKGSVDT LDIGGAFNLKLQNRMNLEAGAERVSMSAARWSVMGGSLNLQNFVWDKKAGITSKGSAQSL HITELQNFVKIPVEHNLVLGGDWDLAYSQNARGYLNINRQSGDIILPNKDPKKQMPLGLS ALSLRTRFQNGRIDSTLDGSTRFGNVNANLGISQQFGNKIANAPISGKINLNVPDLGAIK TFLPATAQGITGRLNVAATIGGRVGAPTVAATLNGTSNYGAADGTVNIGQGSSIDTAPLS GKLNLNVADLEVFRNFLPVGQTVKGRLNAAVSLGGRVGEPQLSGTLNGENLYYRNQTQGL ILDNGVLRSHLQGQRWVIDSLKFHKGGTLELKGSVNLANADPDVDVDVVFDKYDTLSRPN RRLRLSGSAKVQYNQQKGVFLNGTLNSDYGMFGSQKSSMPSLDDDVVVLGEEQKQTAAVT PINLNLTLNLNDNIRFVGYGADITIGGRLNIIARPGETIQGVGTVKVVKGRYKAYGQDLD ITKGTVSFVGPLNNPNLNIRAERRLSPVGAGVEVLGSLANPRVTLVAKEAMSEKDKLSWL ILNRASSGSDGDNAALSAAAGALLAGQVNDRLGLVDDLGITSQRSRNAQTGELNPAEQVL TVGKQFTNNLYVGYEYGISSAEQSVKLVYQLTRAIQVIARVGSRSYGGELKYTIRFDRLF RSDYEDDRKIEEAEKQKAAQMQ >gi|257257253|gb|ACDX02000004.1| GENE 109 120927 - 121544 777 205 aa, chain - ## HITS:1 COG:NMA2201 KEGG:ns NR:ns ## COG: NMA2201 COG2979 # Protein_GI_number: 15795070 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 202 1 202 204 254 71.0 8e-68 MNFNNLLNQILGTVQKNSRSVSDSPLNSFGGGALVAGLASMLMKKKNTKKLVKAGSVAAL GYIAYKGYQSWQQNRNQPELPQQAFEPVGQLAETHSRVILRTMIAAAASDGLIDEAEKQV IARESGTDAETAAWLAAEYERPATVEEIAAAVGNDEALAAETYLAARLVCADLSRKEIVF LSRLSQALKLDDQLVENLEKQLDLA >gi|257257253|gb|ACDX02000004.1| GENE 110 121903 - 122259 238 118 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|154175415|ref|YP_001407462.1| NADH dehydrogenase subunit A [Campylobacter curvus 525.92] # 1 118 6 126 129 96 38 8e-19 MLASYFPVLVFILVGLAAGVLFILLGTILGPKHHYAEKDAAYECGFEAFENARMKFDVRY YLVAILFILFDLEVAFMLPWAVVFKDLGAYGFWSMLVFIVVLTVGFVYEWKKGALEWE >gi|257257253|gb|ACDX02000004.1| GENE 111 122250 - 122732 457 160 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|154175216|ref|YP_001407461.1| NADH dehydrogenase subunit B [Campylobacter curvus 525.92] # 12 154 17 158 170 180 56 3e-44 MGIEGVLKKGFITTSADTVLNYMRTGSLWPVTFGLACCAVEMMHAGMARYDLDRFGIIFR PSPRQADLMIVAGTLTNKMAPALRRVYDQLAEPRWVLSMGSCANGGGYYHYSYSVVRGAD RVVPVDVYVPGCPPTAEALIYGLMQLQQKIKRTSTIARDE >gi|257257253|gb|ACDX02000004.1| GENE 112 122746 - 123339 956 197 aa, chain + ## HITS:1 COG:NMB0243 KEGG:ns NR:ns ## COG: NMB0243 COG0852 # Protein_GI_number: 15676167 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase 27 kD subunit # Organism: Neisseria meningitidis MC58 # 1 197 1 197 197 385 95.0 1e-107 MASIHKLYETVVRVLGNQASKVISALGEITVECLPEHYVSIMTALRDHEELHFELLVDLC GVDYSTYKNEAWQGKRFAVVSQLLSVKNNQRIRVRVWVSDDDFPVVESVVPVYNSADWYE REAFDLYGIMFNNHPDLRRILTDYGFVGHPFRKDFPISGYVEMRYDEEQKRVIYQPVTIE PREITPRIVREENYGGQ >gi|257257253|gb|ACDX02000004.1| GENE 113 123329 - 124585 1771 418 aa, chain + ## HITS:1 COG:NMA0016 KEGG:ns NR:ns ## COG: NMA0016 COG0649 # Protein_GI_number: 15793050 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase 49 kD subunit 7 # Organism: Neisseria meningitidis Z2491 # 1 418 1 418 418 866 98.0 0 MANKLRNYTINFGPQHPAAHGVLRMILELDGEQIVRADPHIGLLHRGTEKLAETKTYLQA LPYMDRLDYVSMMVNEQAYCLAVEKLAGIDVPIRAQYIRVMFAEVTRILNHLMGIGSHAF DIGAMTAILYAFRDREELMDLYEAVSGARMHAAYFRPGGVYRDLPDFMPKYESSKFRNAK VLQQLNESREGTMLDFIDAFCERFPKNIDTLETLLTDNRIWKQRTVGIGVVSPERAMQKG FTGVMLRGSGVEWDVRKKQPYEVYDQMDFDIPVGVNGDCYDRYLCRMEEMRQSVRIIKQC VDWLRVNPGPVITTNHKFAPPKRTEMKTGMEDLIHHFKLFTEGMHVPEGETYTAVEHPKG EFGVYIISDGANKPYRLKIRAPGFAHLQGMDEMAKGHMLADVVAIIGTQDIVFGEVDR >gi|257257253|gb|ACDX02000004.1| GENE 114 124585 - 125058 710 157 aa, chain + ## HITS:1 COG:NMB0245 KEGG:ns NR:ns ## COG: NMB0245 COG1905 # Protein_GI_number: 15676169 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase 24 kD subunit # Organism: Neisseria meningitidis MC58 # 1 157 1 157 157 308 98.0 4e-84 MLSAESLKQIDIELAKYPADQRRSAIMGALRIAQTEKGWLAPETIAFVADYIGITPAQAY EVATFYNMYDLEPVGKYKLTVCTNLPCALRGGMDTGEYLKKKLGIGYGETTPDGKFTLVE GECMGACGDAPVMLVNNHSMCSFMTEEAIEKKLAELE >gi|257257253|gb|ACDX02000004.1| GENE 115 125456 - 126757 1719 433 aa, chain + ## HITS:1 COG:NMB0246 KEGG:ns NR:ns ## COG: NMB0246 COG1894 # Protein_GI_number: 15676170 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit # Organism: Neisseria meningitidis MC58 # 1 433 1 433 433 887 97.0 0 MAIYQSGVIFDQVDTANPDCWTLDEYVKRGGYTALRRILSENISQTDVIDEVKTSGLRGR GGAGFPTGLKWSFMPRSFPGEKYVVCNTDEGEPGTFKDRDIIMFNPHALIEGMIIAGYAM GAKAGYNYIHGEIFEGYQRFEVALEQARAAGFLGKNILGSDFEFELFAHHGYGAYICGEE TALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFASVPFIVRDGGQTFADKGIPN AGGTKLFCISGHVERPGNYEVPLGTPFAEILKMAGGMRGGKKLKAVIPGGSSAPVLPADI MMQTNMDYDSISKAGSMLGSGAIIVMDEDVCMVKALERLSYFYYDESCGQCTPCREGTGW LYRIIHRIVEGKGRMEDLDLLDSVGNQMAGRTICALADAAVFPVRSFTKHFREEFVHYIE HGGPMKEHKWGGW >gi|257257253|gb|ACDX02000004.1| GENE 116 126757 - 127131 329 124 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261364353|ref|ZP_05977236.1| ## NR: gi|261364353|ref|ZP_05977236.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 124 1 124 124 228 100.0 8e-59 MAEKNYFGYPCDDWEAAKLEAKKYLIEKVAKLGNDITYGNLALAIKTIDIPAYGDAMSNF LDEMSRSTYDAHGFMLSALVVSQETRKPGRGFWTLAEKLYKEQKDWDYWYHNEKKKIWEK YKQS >gi|257257253|gb|ACDX02000004.1| GENE 117 127519 - 129780 2694 753 aa, chain + ## HITS:1 COG:NMA0010 KEGG:ns NR:ns ## COG: NMA0010 COG1034 # Protein_GI_number: 15793044 # Func_class: C Energy production and conversion # Function: NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) # Organism: Neisseria meningitidis Z2491 # 1 753 1 753 753 1456 96.0 0 MLQIEIDGKQVSVEQGATVIEAAHKLGTYIPHFCYHKKLSIAANCRMCLVDVEKAPKPLP ACATPVTDGMIVRTHSAKAREAQEGVMEFLLINHPLDCPTCDQGGECQLQDLAVGYGKTT SRYTEEKRSVVGKDMGPLVSAEEMSRCIHCTRCVRFTEEIAGLQEIAMANRGEHSEIMPF IGKAVETELSGNVIDLCPVGALTSKPFRFNARTWELNRRKSVSAHDALGSNLIVQTKDHT VRRVLPLENEAINECWLSDRDRFAYEGLYHESRLKNPKIKQGGEWMDVDWKTALEYVRSA IECIAKDGNQNQVGIWANPMNTVEELYLAKKFADGLGVKNFATRLRQQDKRLSDDLNGAQ WLGQSIESLADNEAVLVVGANLRKEQPLLTARLRRAAKERMALSVLASSKEELLMPLLAQ EAVHPDEWAGRLKNLSADAEHAITASLKNAEKAAVILGAEVQNHPDYAAIYAAAQELADA TGAVLGILPQAANSVGADVLGVNSGESVAEMANAPKQAVLLLNVEPEIDTADGAKAVAAL KQAKSVMAFTPFVSETLLDVCDVLLPIAPFTETSGSFINMEGRLQSFHGVVQGFGDSRPL WKVLRVLGNLFDLQGFEYHDTAAILKDALDVESLPSKLNNRAASTQKDFQTTSNRLVRVG GVGIYHTDAIVRRSAPLQATSHAAVPAARVNPNTLARLGLQDGQTAIAKQNGAGVSVVVK ADAGLPENVVHLPLHTENAALGALMDTIELAGA >gi|257257253|gb|ACDX02000004.1| GENE 118 129783 - 130859 1677 358 aa, chain + ## HITS:1 COG:NMB0250 KEGG:ns NR:ns ## COG: NMB0250 COG1005 # Protein_GI_number: 15676174 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 1 (chain H) # Organism: Neisseria meningitidis MC58 # 1 358 1 358 358 592 99.0 1e-169 MQEWFQNLFAATLGLGDLGITVGLVVSVIVKIVIILIPLILTVAYLTYFERKVIGFMQLR VGPNVTGPWGLIQPFADVFKLLFKEVTRPKLSNKALFYIGPIMSLAPSFAAWAVIPFNEE WVLTNINIGLLYILMITSLSVYGVIIAGWASNSKYSFLGAMRASAQSISYEIAMSAALVC VVMVSGSMNFSDIVAAQAKGIAGGSVFSWNWLPLFPIFIVYLISAVAETNRAPFDVAEGE SEIVAGHHVEYSGFAFALFFLAEYIFMILIAALTSLMFLGGWLSPFPQSWGIVGTPSAFW MFVKMAAVLYWYLWIRATFPRYRYDQIMRLGWKVLIPIGFAYIVILGVWMISPLNLWK >gi|257257253|gb|ACDX02000004.1| GENE 119 130939 - 131418 605 159 aa, chain + ## HITS:1 COG:NMA0008 KEGG:ns NR:ns ## COG: NMA0008 COG1143 # Protein_GI_number: 15793042 # Func_class: C Energy production and conversion # Function: Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) # Organism: Neisseria meningitidis Z2491 # 1 159 1 159 159 317 100.0 7e-87 MANLVKTFLLGELVKGMGVTLKNFFARKDTIYFPEEKTPQSVRFRGLHAQRRYPNGEERC IACKLCEAVCPAMAINIESEEREDGTRRTKRYDIDLTKCIFCGFCEEACPTDAIVETHIF EYHGEKKGDLHMTKPILLAIGDKYEAEIAKRKAADAPYR >gi|257257253|gb|ACDX02000004.1| GENE 120 131430 - 132101 982 223 aa, chain + ## HITS:1 COG:NMB0253 KEGG:ns NR:ns ## COG: NMB0253 COG0839 # Protein_GI_number: 15676177 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 6 (chain J) # Organism: Neisseria meningitidis MC58 # 1 223 1 223 223 355 94.0 3e-98 MTFSAILFYILAAIVLYGALRTVTAKNPVHAALHLVLTFCVSAMIWMLMQAEFLGVTLVV VYVGAVMVLFLFVVMMLNIDIEEMRAGFWRHAPVAGVVGTLLAVALILILVNPKTDLAAF GLMKDIPADYNNIRDLGSRIYTDYLLPFELAAVLLLLGMVAAIALVHRKTTNPKRMDPAD QVKVRADQGRMRLVKMEAVKPQIESLEENEVSDDLKPKEGGKA >gi|257257253|gb|ACDX02000004.1| GENE 121 132098 - 132403 485 101 aa, chain + ## HITS:1 COG:NMA0005 KEGG:ns NR:ns ## COG: NMA0005 COG0713 # Protein_GI_number: 15793039 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) # Organism: Neisseria meningitidis Z2491 # 1 101 1 101 101 146 100.0 1e-35 MITLTHYLVLGALLFGISAMGIFMNRKNVLVLLMSIELMLLAVNFNFIAFSQHLGDTAGQ IFVFFVLTVAAAESAIGLAIMVLVYRNRQTINVADLDELKG >gi|257257253|gb|ACDX02000004.1| GENE 122 132409 - 132945 388 178 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261364360|ref|ZP_05977243.1| ## NR: gi|261364360|ref|ZP_05977243.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 178 1 178 178 359 100.0 5e-98 MPSEQTDQANIEQWVFKPRSLLVLCWVAVPFFLSIWLVWFAFAWAGRLGWLFGLLSLLCA GIGIAGWKMWQNSRRNTGRDREFIRLDEDGLSYCIHGCGAGKVKYAWIRSVYQVHTRGCQ GIAVEYRRPETGVVLDTIMLTDLDRLDLGRNGFKLADPHDIITKAIRARCQDRQLYRI >gi|257257253|gb|ACDX02000004.1| GENE 123 133123 - 135147 2926 674 aa, chain + ## HITS:1 COG:NMA0002 KEGG:ns NR:ns ## COG: NMA0002 COG1009 # Protein_GI_number: 15793036 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit # Organism: Neisseria meningitidis Z2491 # 1 674 1 674 674 1211 98.0 0 MNDMTLYLIIALVPLAGSLIAGLFGNKIGRAGAHTVTILGVAVSAVLSAYVLWGFIDGSR AKFDENVYTWLTMGGLDFSVGFLVDTMTAMMMVVVTGVSLMVHIYTIGYMHDEQVGYQRF FSYISLFTFSMLMLIMSNNFIQLFFGWEAVGLVSYLLIGFYFKRPSAIFANLKAFLINRV GDFGFLLGIGLVLAYFGGSLRYQDVFAYLPNVQNATIQLFPGVEWSLITVTCLLLFVGAM GKSAQFPLHVWLPDSMEGPTPISALIHAATMVTAGLFMVSRMSPIYEMSSTALSVIMVIG AITALFMGFLGVIQNDIKRVVAYSTLSQLGYMTVALGASAYSVAMFHVMTHAFFKALLFL AAGSAIIGMHHDQDMRHMGNLKKYMPITWLTMLIGNLSLIGTPFFSGFYSKDSIIEAAKY STLSGSGFAYFAVLASVFVTAFYAFRQYFMVFHGEEKWRSLPEHHSDDHGEEHHGLGKND NPHESPLVVTLPLILLAIPSVIIGYIAIEPMLYGDFFKDVIFVNADAHLTMHIMKEEFHG ALAMVSHSLHSPVLYLAIAGVLSAWLLYVKLPHLPAKIAQAFRPVYVLFENKYYLDALYF NVFAKGTRALGNFFWKVGDTAIIDNGIVNGSAKLVGAIAAQVRKVQTGFIYTYAAAMVFG VLVLLGMTFWGLFR >gi|257257253|gb|ACDX02000004.1| GENE 124 135366 - 135671 394 101 aa, chain + ## HITS:1 COG:no KEGG:str1594 NR:ns ## KEGG: str1594 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:stc00400]; Metabolic pathways [PATH:stc01100]; Biosynthesis of secondary metabolites [PATH:stc01110] # 10 97 7 94 96 88 59.0 7e-17 MVEDKLPQTLDEVREAIDGLDKELIELLARRQKLVRQAGRLKPKNDVQAVSAPERVAQVI ASRRAYAEKAGLSPEVAEAVWRSMIDAFIKLEMETNRTDGA >gi|257257253|gb|ACDX02000004.1| GENE 125 135896 - 136216 488 106 aa, chain + ## HITS:1 COG:NMA0001 KEGG:ns NR:ns ## COG: NMA0001 COG0662 # Protein_GI_number: 15793035 # Func_class: G Carbohydrate transport and metabolism # Function: Mannose-6-phosphate isomerase # Organism: Neisseria meningitidis Z2491 # 1 106 1 106 106 190 90.0 5e-49 MPDTHTIRSAEFTASRAWGVLDIANMNGTTVRLHWTDQPYKWHVNDGEEVFAVMDGEVDM HYRENGEEHIVRLTSGDIFYAGVGTEHVAHPCGEARILVIEKEGSV >gi|257257253|gb|ACDX02000004.1| GENE 126 136457 - 137953 1932 498 aa, chain + ## HITS:1 COG:NMA2229 KEGG:ns NR:ns ## COG: NMA2229 COG1008 # Protein_GI_number: 15795098 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 4 (chain M) # Organism: Neisseria meningitidis Z2491 # 1 498 1 498 498 816 93.0 0 MFSNYLLSLAIWIPIAAGVLVLATGPDSRAPLARVLALIGALAGFLVTLPLFTGFDRLSG GYQFTEFHEWIPLLRINYSLGVDGISVLFVILNAFITLMVVLAGWEVIQKRPAQYMAAFL IMSGLINGAFSARDALLFYVFFEGMLIPLYLIIGVWGGPRRVYASVKLFLYTLMGSLLML VAIVYLSYQVGGFAIEDFQNIKQIPLGVQQLLFVAFFLSFAVKVPMFPVHTWLPDAHVEA PTGGSMVLAAITLKLGAYGFLRFILPILPDASRYFAPVIIVLSLIAVVYIGMVALVQTDM KKLVAYSSISHMGFVTLGMFLFVNGQLNDWALKGAVIQMISHGFVSAAMFMCIGVMYDRL HTRNIADYGGVVNVMPKFAAFMMLFAMANAGLPATSGFVGEFMVIMGAVKVNFWVGALAA LTLIYGASYTLWMYKRVIFGAVGNPHVADMKDINCREFAILAILAVAVLGMGLYPQAFIE VVHQAANDLIAHVAQSKI >gi|257257253|gb|ACDX02000004.1| GENE 127 137963 - 139438 1799 491 aa, chain + ## HITS:1 COG:NMB0259 KEGG:ns NR:ns ## COG: NMB0259 COG1007 # Protein_GI_number: 15676183 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 2 (chain N) # Organism: Neisseria meningitidis MC58 # 1 491 1 480 480 639 81.0 0 MNLIDLNLMPAMPEIVLFALLIAVLLADLWISDENRYLTHLMSLGTVIIVAVTQLAVWEQ GSTLAFHGMYIADGMSRLSKLVLYGLTFGLFIYSKPYNQARGIFKGEFYTLSLFALLGMS VMVSAAHFLTAYIGLELLSLSLYAMIALRRDSGRSAEAALKYFVLGALASGLLLYGISMV YGATGSLEFATVLASSYSELANEWLLKLGLVFIVVAVAFKLGAVPFHMWVPDVYHGAPTS VAAFVGTAPKIAAVVFAFRILVTGLGTVHHDWSQMFAVLAVASLLIGNLAAIMQANIKRM LAYSTISHMGFILLAFMAGAVGFAAGLYYAITYALMAAVGFGILMVLSTDNIECEEIKDL AGLNQRHAWFAFLMLLAMFSMAGIPPLMGFYAKFGVIKALLSASTAQNAAMAGSTYIVLA VFAVVMSLIGAFYYLRVVKVMYFDESTHDQPVGSNYAAKFFLSVNAFLLVLWGVMPQTMI DWCAKALENTL >gi|257257253|gb|ACDX02000004.1| GENE 128 139766 - 140065 492 99 aa, chain + ## HITS:1 COG:no KEGG:NMCC_1886 NR:ns ## KEGG: NMCC_1886 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_053442 # Pathway: not_defined # 1 99 32 130 130 159 85.0 5e-38 MTASMYILLVLALIFANAPFVTAKFFGVLPLKRKHIGHHLVELAAGFILTAILAYILESR AGAVQHQDWEFYATVVCLYLIFAFPCFVWRYFWHARNRE >gi|257257253|gb|ACDX02000004.1| GENE 129 140120 - 141244 2084 374 aa, chain + ## HITS:1 COG:RSc2819 KEGG:ns NR:ns ## COG: RSc2819 COG0263 # Protein_GI_number: 17547538 # Func_class: E Amino acid transport and metabolism # Function: Glutamate 5-kinase # Organism: Ralstonia solanacearum # 1 370 1 371 374 393 61.0 1e-109 MSLQNLSNIRTLVVKVGSSLVTAGGKGIDQAALDRWAAQIAELGKQGVQTVLVSSGAIAE GIKRLGWSKRPTAINELQAAAAVGQTGIAQAYETAFAPHGIRTAQILLTHDDLSNRTRYL NARSTLQTLLSKGIVPVINENDTVTTDEIKLGDNDTLGALVTNLIEADALVLLTDQKGLY DSDPRKNPQAKLIPTIAAGHPDLESMAGGAGSSVGTGGMYTKVTAAKRAALSGAATVVAW GGEPDVLVRLKQGESIGTLFTSAHSRVAARKQWLLGHVQTAGSLTVDSGAAKALTEQHAS LLPVGCIRADGHFHRGELVAILDTDGKEIARGLTNYSSGETAKILQTPSERIAEKLGYAH EDELIHRDNMASHW >gi|257257253|gb|ACDX02000004.1| GENE 130 141677 - 141808 90 43 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKFFFLTTALLLLNACAAQSGQGSSAQVYGEIKGGVESSHVH >gi|257257253|gb|ACDX02000004.1| GENE 131 142355 - 143638 791 427 aa, chain + ## HITS:1 COG:NMA2198 KEGG:ns NR:ns ## COG: NMA2198 COG0415 # Protein_GI_number: 15795067 # Func_class: L Replication, recombination and repair # Function: Deoxyribodipyrimidine photolyase # Organism: Neisseria meningitidis Z2491 # 3 426 16 430 433 369 48.0 1e-102 MQAHTLVWFRRNLRIRDNAALSAAVKRGLPVAGVWVAKGSSEIRNPRQDWFHYQAAAALH GSLAARGVALYAVNRVEELPAFAARLNVQTVIADEAYTSSEIGQDNRIWRILDEKGVAFE RVNDRAVFAKADIMGSHGAPYTDFPHYKEAWLALFRQRFGGQDADCRQTEIFQTTSAEMP PFPAWNGQQNIVSAQRGGEDEADKQWRQFEENIGFYPIMKDFPARKGTSRLSAYLSAGCI SPRVLAVEAAGQGADAWLDNLIRRDFYQQLAYHRARIEPETDALSTTFSDDLTERWRQGE TGFPLIDAAMRSLKSSGWLHPALRSLTAEFLCGILHQPSEPGIAWFAAQQTDFDPALNEG NWQTAARNARRRSIDIIQTARRLDPDGTFVRRHIPELAHLPANLVHTPWLASSEIDAHGY PSPVIAP >gi|257257253|gb|ACDX02000004.1| GENE 132 143762 - 144907 2043 381 aa, chain + ## HITS:1 COG:NMA0079 KEGG:ns NR:ns ## COG: NMA0079 COG1289 # Protein_GI_number: 15793108 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis Z2491 # 1 373 1 373 375 577 85.0 1e-164 MNASQRERFVKRWLDSYERYRYRRLIHAVRLGLAVLFATLLAKLLHLQHGEWIGMTVFVV LGMLQFQGAIYSKAVERMLGTVIGLGAGLTVLWLNQHYFHGGILFYLTVGTASAAAGWAA VGKNGYVPMLAGLTMCMLIGDNSNNWLDSGLMRAMNVLIGAAIAIVSAKLLPLRSTLMWR FMLADNLTECGKMIAEISNGKRMTRERLEQNMVKMRQINARMVKSRSHLAATSGESHISS AMMEAMQHAHRKIVNTTELLLTTAAKLQAPTLNEHEIRLLDRHFNRLQRDLRLTVRLIKG HYARRIRIDTSINPELGKLAARLHYEWQGFLWLSTNMRNEISALVILLQRSRRKWLDKHE LQRLREHLRETREGDLEEEVV >gi|257257253|gb|ACDX02000004.1| GENE 133 144962 - 145411 762 149 aa, chain + ## HITS:1 COG:NMB0013 KEGG:ns NR:ns ## COG: NMB0013 COG3399 # Protein_GI_number: 15675961 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 1 149 1 149 149 187 82.0 5e-48 MSLYAIAHIIHLFCAIAFVGGVFFEMLVLSVMHTGRVSRESRREVERAMSHRAVRVMPPV VITLFISGIVMAFNRYLPFLSEPFATSLGTLLTLKILLAVSVLVHFAIAVVKMARHTLTV GWSKYIHAVVFSHMLFIVFFAKAMFYLSW >gi|257257253|gb|ACDX02000004.1| GENE 134 145491 - 146459 1396 322 aa, chain + ## HITS:1 COG:NMB0012 KEGG:ns NR:ns ## COG: NMB0012 COG0861 # Protein_GI_number: 15675960 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane protein TerC, possibly involved in tellurium resistance # Organism: Neisseria meningitidis MC58 # 1 319 1 320 323 483 81.0 1e-136 MTEHPSVGSPLFYGVFFAAVFIMIIIDMLSLKKSGAHKVSVKEAVAWSCVWVAVSCAFAG WLYFELAGNPLYGAVVAKEKTLEFFTGYILEKSLAVDNIFVFLMIFGYFKVSPKYQHRVL LYGVFGAIVLRAIMIFIGAALVQRFEWILYIFGAFLVYTGIHMMKPESEEEDLSQNKILG WLKKVIPVSHQFEGEKFFTVENGKRIATPLLLVLIMVELSDVIFAVDSIPAVFAVTTDPF IVLTSNIFAILGLRAMYFLLADVADRFIFLKYGLAFVLSFIGIKMLIMHWVHIPISISLS VVFGALGASILTSLVYTRQQQK >gi|257257253|gb|ACDX02000004.1| GENE 135 146715 - 147272 794 185 aa, chain + ## HITS:1 COG:NMA0080 KEGG:ns NR:ns ## COG: NMA0080 COG0233 # Protein_GI_number: 15793109 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome recycling factor # Organism: Neisseria meningitidis Z2491 # 1 185 1 185 185 293 96.0 1e-79 MINDIQKTAESKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANVTLL DARTIGVKPFESNMAAKVEKAIRDSNLGLNPAAVGDLIRVPMPMLTEERRKDLIKVVRSE AEEGRVSIRNVRRDANDHIKKLLKEKEISEDEARRGEEAVQKLTDKYIAEADKTLAAKEE DLMAI >gi|257257253|gb|ACDX02000004.1| GENE 136 147330 - 148076 757 248 aa, chain + ## HITS:1 COG:NMB0186 KEGG:ns NR:ns ## COG: NMB0186 COG0020 # Protein_GI_number: 15676113 # Func_class: I Lipid transport and metabolism # Function: Undecaprenyl pyrophosphate synthase # Organism: Neisseria meningitidis MC58 # 1 247 1 247 248 483 95.0 1e-136 MKSSTQTILEHTSVPKHIAVIMDGNGRWAKKRFLPRVMGHKRGLDVLENMVKHCAKLGVQ YLTVFAFSTENWRRPEDEVSFLMGLFLQALQKQVRRLHENNMRLKVLGSRERFNRQILQG IEEAEALTANNTGLTLSIAADYGGRWDILQAANKLIAEGVSEITEDALAKHLMLGDAPEP DLFIRTGGETRISNFLLWQMAYAELYFTDTLWPDFDSKALDDAVASFQKRERRFGRTSEQ LPVEQQRG >gi|257257253|gb|ACDX02000004.1| GENE 137 148079 - 148873 1005 264 aa, chain + ## HITS:1 COG:NMA0082 KEGG:ns NR:ns ## COG: NMA0082 COG0575 # Protein_GI_number: 15793111 # Func_class: I Lipid transport and metabolism # Function: CDP-diglyceride synthetase # Organism: Neisseria meningitidis Z2491 # 1 264 1 264 265 389 84.0 1e-108 MLKQRIITALWMLPLMLGMLFYAPQWLWAAFCGLISLVTLWEYSRMSGLEKLKTNHYLAA TLVFGVIAYAGGWMLPDIVWYAVLAFWLVVMPLWLKFKWKLNGGWQAYTVGWLLVMPFWF ALMSLRPHPDYALSLLAVMGLVWVADVFAYFSGKAFGKHKIAPTVSPGKSWEGAIGGAVC VAVYMTVVWWSGWLTFNAGWFNTVLIGLVLTVVSVCGDLLESWLKRAAGIKDSSNLLPGH GGVFDRVDSLIAVVSVYAAFESLF >gi|257257253|gb|ACDX02000004.1| GENE 138 148995 - 150179 1531 394 aa, chain + ## HITS:1 COG:NMA0083 KEGG:ns NR:ns ## COG: NMA0083 COG0743 # Protein_GI_number: 15793112 # Func_class: I Lipid transport and metabolism # Function: 1-deoxy-D-xylulose 5-phosphate reductoisomerase # Organism: Neisseria meningitidis Z2491 # 1 393 1 393 394 707 93.0 0 MTQQVLTILGSTGSIGESTLDVVSRHPEKFRVFALAGHKQVEKLAAQCRTLCPEYAVVAD AEHAARLEALLKHDGTATQVLHGAQALVDVASANEVSGVMCAIVGAAGLPSALAAAQKGK TIYLANKETLVVSGALFMETARANGAAVLPIDSEHNAIFQVLPRDYTGRLNEHGIRSIIL TASGGPFLTTDLGTFDSITPAQAVKHPNWSMGRKISVDSATMMNKGLELIEAHWLFNCPP DKLEVVIHPQSVIHSMVRYRDGSVLAQLGNPDMRTPIAYCLGLPERIDSGVGDLDFDALS ALTFQKPDFDRFPCLKLAYEAMNAGGAAPCVLNAANEAAVAAFLDGQIKFTDIAKTVAHC LAQDFSDDLGNIENLLAQDAVTRRQAQEFIAALG >gi|257257253|gb|ACDX02000004.1| GENE 139 150391 - 151731 1544 446 aa, chain + ## HITS:1 COG:NMA0084 KEGG:ns NR:ns ## COG: NMA0084 COG0750 # Protein_GI_number: 15793113 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted membrane-associated Zn-dependent proteases 1 # Organism: Neisseria meningitidis Z2491 # 1 446 1 446 446 718 77.0 0 MQTLLAFIFAILILVSLHEFGHYIVARLCDVKVVRFSVGFGKPFFSRKRGDTEWCLAPIP LGGYVKMVDTREGEVAQADLPYAFDKQHPAKRIAIVAAGPLTNLALAVLLYGLSFSFGVT EIRPYVGMVEQNTIASKAGFQPGDKIISVNGVNVGEWEKAQQEIVLNIESGKVNVAVQTT SGQETMRIIDAAGTPEAGKIAKNQGYIGLSPFKITTRVGEMTENSPAKKAGLKKGDKLIS ADGQDVESWQQWVEIVRQSPGKKIELSYERNGQTFQTTIRPDSIQQPDRTLVGRVGFGPQ GDEAWAKEIKREYKPSVAEAFAMGWDKTVNNAWMTVKFFGKLITGNASLNHISGPLTIAD VAGKTAQLGFQSYLEFLALVSISLGVLNLLPIPVLDGGHLVFYTAEWIRGKPLSERIQAI GLRLGLAAMLLMMALAFFNDINRLFG >gi|257257253|gb|ACDX02000004.1| GENE 140 151736 - 154135 3615 799 aa, chain + ## HITS:1 COG:NMA0085 KEGG:ns NR:ns ## COG: NMA0085 COG4775 # Protein_GI_number: 15793114 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein/protective antigen OMA87 # Organism: Neisseria meningitidis Z2491 # 1 799 1 797 797 1335 83.0 0 MKLKQIASALMVLGMSPLAFADFTIQDIRVEGLQRTEPSTVFNYLPVKVGDQFSDARSEE IIKSLYATGFFDDVRVETMGNQVLLTVIERPTISTLNITGAKMLQNDVIKKNLESFGLAQ SQYFNPATLSQSVASLKEEYKSRGKQSVQITPTVTKLARNRVSIDIAIDEGKTTKITDIE FEGNKVYSDRKLMKQMSLSEGGMWTWLTKSNQFNEQKFSQDMERVSEFYQNNGYFNFRIL DTDIQTNEDKTKQIIKITVDEGERFRWGDVRIEGDTREVPKEELQKLLTMKKGKWYERAQ MVKSLEAIQNRMGTAGYAFSEVNVQPIPNAETQTVDFVLNVEPGRKIYVNEINITGNNKT RDEVVRRELRQMESAPYDTSKLQRSKERVELLGYFDNVQFDAVPVANTPDQVDLNMSVNE RSTGSLDMSAGWVQDTGLVMSVGVSQDNLFGTGKSVSLRASRSKTTLNGSLSFTDPYFTP DGVSLGYDIYGKSYDPRKASSSAKQYKTTTAGAGVRMGIPVTEYDRVNLGLAAEHLTVNT YKGAPKRYADFINQYGKGTDGVGSFKGWLYKGTIGWGRNKTDSALWPTRGYMTGINGEIA LPGSDLQYYTLTHNQTWFFPLTKDFTLMLGGEVGVGNGYGKTKTMPFFENFYGGGLGSVR GYESGTLGPKVYDEYGEKISYGGNKKANVSAELLFPMPGIKDSRSVRLSLFADAGSVWDG KTYNDSSSNTYYTNNAAQNPYGLGKTHKSTFKEELRYSAGAAVTWLSPLGPMKFSYAYPL KKKDSDEIQRFQFQLGTTF >gi|257257253|gb|ACDX02000004.1| GENE 141 154289 - 154801 881 170 aa, chain + ## HITS:1 COG:NMA0086 KEGG:ns NR:ns ## COG: NMA0086 COG2825 # Protein_GI_number: 15793115 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein # Organism: Neisseria meningitidis Z2491 # 9 170 6 166 166 171 64.0 6e-43 MNIIANAFRLGGAALLGFGLMNQAAAAEAVQKIGFINTERVYLESKQAQRIQTTLEKEFR SRQDALQKLQQEGEKLEKSLSEGKLQGKEREAAAKRWGELVQQFRKKQAELAEDYNLRRN EEFAALQQNANRIIVDLAKREGYDVILQDVIYVNARYDITDSVIKALNTR >gi|257257253|gb|ACDX02000004.1| GENE 142 154998 - 156041 1660 347 aa, chain + ## HITS:1 COG:NMB0180 KEGG:ns NR:ns ## COG: NMB0180 COG1044 # Protein_GI_number: 15676107 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase # Organism: Neisseria meningitidis MC58 # 1 346 1 346 348 610 95.0 1e-174 MTSKTYTLSQITAQLGGEWRGEDISVAAVRPLADAQAEHISFLANPKYKAEVHDSSAGAV IVSAKAVDEFEGRNLIVADDPYLYFAKVARLFSPVVKARGGIHPTAVVEEGATVPASCEI GANAYIGANTVLGEGCRILANAVVQHDCKLGDEVVLHPNAVVYYGCTLGNRVEIHSGAVI GADGFGLAFASDSWFKIPQTGAVTLGDDVEIGSNTNIDRGAMSDTTVGNGTKIDNQVQIG HNCKIGSHTVIAAKTGISGSVTIGSYCIIGGGVGTVGHIEIADKTTIGGGTSVTHSITES GKHLAGIFPMSTHKEWARNAVYIHRLSEMNKRLKTLENRLSDSEKDE >gi|257257253|gb|ACDX02000004.1| GENE 143 156167 - 156616 844 149 aa, chain + ## HITS:1 COG:NMB0179 KEGG:ns NR:ns ## COG: NMB0179 COG0764 # Protein_GI_number: 15676106 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases # Organism: Neisseria meningitidis MC58 # 1 149 1 149 149 280 96.0 6e-76 MDVQLPIEAKDIQKLIPHRYPFLQLDRITAFESMKTLTAIKNVTMNEPQFQGHFPDLPVM PGVLIIEAMAQACGTLAILSEGGRKENEFFFFAGIDEARFKRQVIPGDQLVFEVELLTNK RGIGKFSAVAKVDGQVAVEAIIMCAKRVV >gi|257257253|gb|ACDX02000004.1| GENE 144 156702 - 157478 1374 258 aa, chain + ## HITS:1 COG:NMA0090 KEGG:ns NR:ns ## COG: NMA0090 COG1043 # Protein_GI_number: 15793119 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase # Organism: Neisseria meningitidis Z2491 # 1 258 1 258 258 512 96.0 1e-145 MTLIHPTAVIDPKAELDSSVKVGAYTVIGPNVQIGANTEIGPHTVINGHTTIGENNRIFQ FASLGEIPQDKKYRDEPTKLIIGNGNTIREFTTFNLGTVTGIGETRVGDDNWIMAYCHLA HDCVIGNHTIFANNASLAGHVTIGDYVVLGGYTLVFQFCQIGDYAMTAFAAGVHKDVPPY FMAAGYRAEPAGINSEGMRRNGFTAEQISAVKDVYKTIYHRGIPFEEAKADILRRAETQA ELAVFKDFFAQSTRGIIR >gi|257257253|gb|ACDX02000004.1| GENE 145 157801 - 158811 1283 336 aa, chain + ## HITS:1 COG:NMB0195 KEGG:ns NR:ns ## COG: NMB0195 COG1995 # Protein_GI_number: 15676122 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxal phosphate biosynthesis protein # Organism: Neisseria meningitidis MC58 # 1 328 7 331 335 470 76.0 1e-132 MSLPVLAVTSGEPAGIGPDICLDLAFAELPCRPVVLGDKDLLAQRAEMLGKNVVLRDFVL SDADKAPLCHGELEVLHIPLAAPCEAGTLNPANARYVLQLLDTAYQGITEGIFDGMVTAP LHKGIINDAGAGGGFFSGHTEYLAEKSQTEQVVMMLAGGGLRVALVTTHLPLRAVADAVT QPLVESVVRILNADLRDKFGIAQPHILVTGLNPHAGEGGHLGHEEADIIIPALARLKSEG IHVSGPYPADTVFQPFLLKDADAVLAMYHDQGLPTLKYAGFGQGVNITLGLPFIRTSVDH GTALDLAGTGKAASGSLIEAVRTALEMAAEIRKKQR >gi|257257253|gb|ACDX02000004.1| GENE 146 159010 - 159780 1462 256 aa, chain + ## HITS:1 COG:NMB0191 KEGG:ns NR:ns ## COG: NMB0191 COG1192 # Protein_GI_number: 15676118 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Neisseria meningitidis MC58 # 1 256 1 256 257 409 83.0 1e-114 MSAQILAVANQKGGVGKTTTTVNLAASLASKGKRVLVIDLDPQGNATTGSGIDKARLEEG VYQVVLGDTDIKTAVVRSGDGSYDVLGANRALAGAEIELVQEIAREIRLKNALQTVENDY DFVLIDCPPSLTLLTLNGLVAANGVIVPMLCEYYALEGISDLIATVRKIRQAINPRLDIT GIVRTLYDSRSRLVVEVSEQLFQHFGNLMFQTVIPRNVRLAEAPSHGMPALAYDANAKGT KAYLALAEELLERTKG >gi|257257253|gb|ACDX02000004.1| GENE 147 159869 - 160246 268 125 aa, chain - ## HITS:1 COG:RSc2265 KEGG:ns NR:ns ## COG: RSc2265 COG2801 # Protein_GI_number: 17546984 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Ralstonia solanacearum # 2 120 146 265 269 113 52.0 7e-26 MSRRADSEMVKEMLEKAAPRLTDKGTMLHSDQGVLYRTAEYRKLIAKHSMVQSMSRKANC WDNAPMESFFAVLKTECFYRAGELTVDELMKQIDDYMDYYNRERCSLKLKKLSPVAYRTQ LTQSA Prediction of potential genes in microbial genomes Time: Sat Jul 16 23:44:20 2011 Seq name: gi|257257250|gb|ACDX02000005.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont4.1, whole genome shotgun sequence Length of sequence - 157152 bp Number of predicted genes - 141, with homology - 136 Number of transcription units - 95, operones - 29 average op.length - 2.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 1592 2153 ## COG3209 Rhs family protein + Prom 1679 - 1738 2.2 2 2 Op 1 . + CDS 1773 - 2306 315 ## gi|261364387|ref|ZP_05977270.1| protein, Rhs family 3 2 Op 2 . + CDS 2319 - 2642 147 ## gi|322387667|ref|ZP_08061276.1| hypothetical protein HMPREF9423_0674 + Prom 2703 - 2762 1.6 4 3 Op 1 1/0.300 + CDS 2828 - 4171 1785 ## COG3209 Rhs family protein 5 3 Op 2 . + CDS 4168 - 5175 1232 ## COG3039 Transposase and inactivated derivatives, IS5 family + Term 5322 - 5371 0.4 - Term 5252 - 5290 1.4 6 4 Tu 1 . - CDS 5342 - 7822 3845 ## COG0058 Glucan phosphorylase - Prom 8069 - 8128 5.8 7 5 Tu 1 . - CDS 8141 - 10141 1891 ## COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases - Prom 10209 - 10268 3.4 - Term 10320 - 10372 15.8 8 6 Op 1 . - CDS 10426 - 11481 942 ## COG0845 Membrane-fusion protein 9 6 Op 2 . - CDS 11502 - 12011 405 ## gi|261364395|ref|ZP_05977278.1| hypothetical protein NEIMUCOT_04511 + Prom 11697 - 11756 3.1 10 7 Tu 1 . + CDS 11778 - 12215 87 ## - Term 12533 - 12577 8.2 11 8 Op 1 13/0.000 - CDS 12585 - 13619 1465 ## COG0547 Anthranilate phosphoribosyltransferase - Term 13642 - 13679 8.0 12 8 Op 2 . - CDS 13686 - 14276 723 ## COG0512 Anthranilate/para-aminobenzoate synthases component II 13 8 Op 3 . - CDS 14291 - 14626 283 ## gi|261364398|ref|ZP_05977281.1| conserved hypothetical protein - Prom 14741 - 14800 3.5 + Prom 14686 - 14745 4.9 14 9 Tu 1 . + CDS 14769 - 15647 1205 ## FIC_02536 JmjC domain protein + Term 15660 - 15702 10.2 - Term 15648 - 15689 10.0 15 10 Op 1 . - CDS 15714 - 16175 439 ## gi|288575594|ref|ZP_05977283.2| lipoic acid synthetase 16 10 Op 2 . - CDS 16198 - 16392 129 ## gi|225076062|ref|ZP_03719261.1| hypothetical protein NEIFLAOT_01094 - Prom 16439 - 16498 8.2 + Prom 16386 - 16445 4.0 17 11 Tu 1 . + CDS 16492 - 18120 2616 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains + Term 18154 - 18198 12.4 - Term 18468 - 18528 17.6 18 12 Tu 1 . - CDS 18543 - 19124 473 ## PROTEIN SUPPORTED gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent - Prom 19197 - 19256 5.0 + Prom 19203 - 19262 4.6 19 13 Tu 1 . + CDS 19293 - 20699 1302 ## COG0305 Replicative DNA helicase + Prom 20717 - 20776 6.8 20 14 Op 1 5/0.033 + CDS 20856 - 21548 546 ## COG4970 Tfp pilus assembly protein FimT 21 14 Op 2 5/0.033 + CDS 21561 - 22265 604 ## COG4967 Tfp pilus assembly protein PilV 22 14 Op 3 5/0.033 + CDS 22265 - 23290 556 ## COG4966 Tfp pilus assembly protein PilW 23 14 Op 4 2/0.300 + CDS 23269 - 23868 355 ## COG4726 Tfp pilus assembly protein PilX 24 14 Op 5 . + CDS 23886 - 24377 589 ## COG4969 Tfp pilus assembly protein, major pilin PilA + Term 24498 - 24544 13.3 - Term 24477 - 24540 19.1 25 15 Tu 1 . - CDS 24550 - 25386 1188 ## COG0414 Panthothenate synthetase - Prom 25458 - 25517 5.0 26 16 Tu 1 . - CDS 25712 - 26500 990 ## COG0413 Ketopantoate hydroxymethyltransferase - Prom 26543 - 26602 3.8 - TRNA 26641 - 26716 92.9 # Thr TGT 0 0 - TRNA 26753 - 26828 92.9 # Thr TGT 0 0 + Prom 26849 - 26908 5.1 27 17 Tu 1 . + CDS 27071 - 27862 1207 ## COG0421 Spermidine synthase + Prom 27921 - 27980 5.8 28 18 Tu 1 . + CDS 28012 - 29265 1311 ## COG0373 Glutamyl-tRNA reductase + Term 29283 - 29331 6.3 - Term 29709 - 29747 9.5 29 19 Op 1 7/0.033 - CDS 29802 - 30104 276 ## COG0640 Predicted transcriptional regulators 30 19 Op 2 . - CDS 30184 - 30705 608 ## COG0607 Rhodanese-related sulfurtransferase 31 19 Op 3 . - CDS 30718 - 30912 288 ## Alide2_3744 hypothetical protein - Prom 30975 - 31034 8.6 - Term 31850 - 31909 20.4 32 20 Tu 1 . - CDS 32022 - 32714 929 ## COG0644 Dehydrogenases (flavoproteins) - Term 33106 - 33144 8.6 33 21 Op 1 19/0.000 - CDS 33152 - 34306 1616 ## COG1566 Multidrug resistance efflux pump - Prom 34385 - 34444 3.5 34 21 Op 2 . - CDS 34572 - 36233 2407 ## COG0477 Permeases of the major facilitator superfamily 35 21 Op 3 . - CDS 36299 - 37720 1040 ## gi|288575609|ref|ZP_05977304.2| conserved hypothetical protein 36 21 Op 4 27/0.000 - CDS 37720 - 39138 683 ## COG0732 Restriction endonuclease S subunits 37 21 Op 5 . - CDS 39125 - 41287 2334 ## COG0286 Type I restriction-modification system methyltransferase subunit - Prom 41316 - 41375 3.6 38 22 Tu 1 . - CDS 41397 - 42827 1815 ## COG1538 Outer membrane protein - Prom 42853 - 42912 5.3 39 23 Tu 1 . - CDS 43060 - 44067 1275 ## COG3039 Transposase and inactivated derivatives, IS5 family - Prom 44165 - 44224 8.4 - Term 44148 - 44190 9.8 40 24 Op 1 4/0.033 - CDS 44233 - 44748 953 ## COG0629 Single-stranded DNA-binding protein 41 24 Op 2 4/0.033 - CDS 44752 - 46134 1676 ## COG0477 Permeases of the major facilitator superfamily - Prom 46197 - 46256 5.8 42 25 Tu 1 . - CDS 46265 - 46906 887 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) - Prom 46977 - 47036 8.2 43 26 Tu 1 . + CDS 47301 - 48809 2087 ## COG0248 Exopolyphosphatase - Term 48901 - 48932 -0.8 44 27 Tu 1 . - CDS 48952 - 49842 1359 ## COG0548 Acetylglutamate kinase - Prom 49865 - 49924 7.0 + Prom 49990 - 50049 3.8 45 28 Tu 1 . + CDS 50151 - 51281 1709 ## COG2866 Predicted carboxypeptidase + Term 51305 - 51354 13.9 + Prom 51306 - 51365 2.9 46 29 Op 1 . + CDS 51394 - 52248 1101 ## COG0682 Prolipoprotein diacylglyceryltransferase + Term 52341 - 52382 4.9 + Prom 52361 - 52420 2.2 47 29 Op 2 . + CDS 52451 - 52597 210 ## + Term 52617 - 52666 15.3 - Term 52605 - 52654 15.3 48 30 Tu 1 . - CDS 52725 - 53321 536 ## Fbal_2392 LemA family protein - Prom 53414 - 53473 5.0 - Term 53451 - 53491 6.0 49 31 Tu 1 . - CDS 53527 - 54612 1262 ## COG1408 Predicted phosphohydrolases + Prom 54654 - 54713 4.4 50 32 Tu 1 . + CDS 54746 - 55654 1302 ## COG2837 Predicted iron-dependent peroxidase + Term 55697 - 55746 11.4 - Term 55685 - 55734 15.4 51 33 Tu 1 . - CDS 55753 - 58326 1682 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 - Prom 58400 - 58459 7.8 + Prom 58486 - 58545 6.1 52 34 Op 1 . + CDS 58587 - 59597 1695 ## COG0180 Tryptophanyl-tRNA synthetase + Term 59607 - 59658 7.3 53 34 Op 2 . + CDS 59675 - 60214 772 ## NMB1470 hypothetical protein 54 34 Op 3 . + CDS 60232 - 61236 1218 ## COG1816 Adenosine deaminase + Term 61244 - 61284 2.1 + Prom 61289 - 61348 2.9 55 35 Tu 1 . + CDS 61537 - 63060 2226 ## COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes + Term 63074 - 63124 12.3 - Term 63062 - 63112 16.1 56 36 Tu 1 . - CDS 63133 - 64263 1383 ## COG0687 Spermidine/putrescine-binding periplasmic protein - Prom 64296 - 64355 6.0 + Prom 64361 - 64420 5.2 57 37 Tu 1 . + CDS 64492 - 67113 3862 ## COG0013 Alanyl-tRNA synthetase + Term 67127 - 67168 10.4 58 38 Tu 1 . + CDS 67186 - 67860 170 ## gi|261364445|ref|ZP_05977328.1| conserved hypothetical protein + Term 67920 - 67946 -0.6 59 39 Tu 1 . + CDS 68056 - 68292 385 ## Vapar_4505 ISPpu13, transposase Orf3 + Term 68390 - 68440 3.0 60 40 Tu 1 . + CDS 68497 - 68733 432 ## Vapar_4505 ISPpu13, transposase Orf3 + Prom 69304 - 69363 6.8 61 41 Tu 1 . + CDS 69502 - 70107 571 ## COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis + Term 70114 - 70151 7.3 + Prom 70139 - 70198 5.6 62 42 Op 1 13/0.000 + CDS 70389 - 71396 759 ## COG0826 Collagenase and related proteases 63 42 Op 2 5/0.033 + CDS 71410 - 72327 1125 ## COG0826 Collagenase and related proteases 64 42 Op 3 . + CDS 72314 - 72754 607 ## COG3154 Putative lipid carrier protein + Term 72818 - 72872 16.0 - Term 72805 - 72859 16.0 65 43 Tu 1 . - CDS 72888 - 74600 2751 ## COG0442 Prolyl-tRNA synthetase - Prom 74821 - 74880 8.9 + Prom 74790 - 74849 10.8 66 44 Tu 1 . + CDS 75050 - 75898 1101 ## COG0627 Predicted esterase + Term 75929 - 75978 12.5 - Term 75916 - 75965 14.1 67 45 Op 1 . - CDS 75982 - 76821 861 ## COG5266 ABC-type Co2+ transport system, periplasmic component - Prom 76879 - 76938 8.6 - Term 76970 - 77020 12.2 68 45 Op 2 . - CDS 77052 - 77873 834 ## COG1806 Uncharacterized protein conserved in bacteria - Prom 77970 - 78029 10.8 69 46 Tu 1 . + CDS 78292 - 80676 3401 ## COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase + Term 80699 - 80737 2.1 + Prom 80704 - 80763 7.0 70 47 Tu 1 . + CDS 80917 - 81600 340 ## COG0739 Membrane proteins related to metalloendopeptidases + Term 81619 - 81669 5.0 + Prom 81853 - 81912 4.8 71 48 Op 1 29/0.000 + CDS 81932 - 83242 1854 ## COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) 72 48 Op 2 . + CDS 83330 - 83950 774 ## COG0740 Protease subunit of ATP-dependent Clp proteases + Term 83971 - 84019 9.0 73 49 Tu 1 . - CDS 84310 - 86535 1573 ## COG0658 Predicted membrane metal-binding protein - Prom 86557 - 86616 3.6 - Term 86601 - 86651 16.1 74 50 Tu 1 . - CDS 86685 - 88037 1891 ## NMA1449 putative glutamate--cysteine ligase (EC:6.3.2.2) - Prom 88136 - 88195 8.3 + Prom 88102 - 88161 5.8 75 51 Op 1 . + CDS 88305 - 89714 2107 ## COG0065 3-isopropylmalate dehydratase large subunit 76 51 Op 2 . + CDS 89808 - 90032 328 ## NMC1178 putative lipoprotein + Prom 90146 - 90205 5.0 77 52 Tu 1 . + CDS 90249 - 90386 103 ## + Term 90581 - 90613 3.0 + Prom 90556 - 90615 4.8 78 53 Op 1 . + CDS 90635 - 91276 1039 ## COG0066 3-isopropylmalate dehydratase small subunit + Term 91315 - 91359 -0.9 79 53 Op 2 . + CDS 91369 - 91830 645 ## COG2731 Beta-galactosidase, beta subunit + Prom 92048 - 92107 2.3 80 54 Tu 1 . + CDS 92232 - 93302 2042 ## COG0473 Isocitrate/isopropylmalate dehydrogenase + Term 93340 - 93371 4.1 + Prom 93625 - 93684 2.9 81 55 Op 1 1/0.300 + CDS 93773 - 94129 400 ## COG3766 Predicted membrane protein 82 55 Op 2 . + CDS 94216 - 95238 1503 ## COG4260 Putative virion core protein (lumpy skin disease virus) + Term 95249 - 95295 9.6 + Prom 95251 - 95310 2.9 83 56 Op 1 . + CDS 95509 - 97029 1637 ## Rpic_4123 putative transmembrane protein 84 56 Op 2 . + CDS 97032 - 97178 114 ## 85 56 Op 3 . + CDS 97175 - 97567 503 ## COG1586 S-adenosylmethionine decarboxylase 86 56 Op 4 . + CDS 97635 - 99245 1613 ## AXYL_04397 twin-arginine translocation pathway signal 3 + Prom 99289 - 99348 2.6 87 57 Tu 1 . + CDS 99370 - 99810 535 ## COG2927 DNA polymerase III, chi subunit + Prom 99845 - 99904 6.9 88 58 Tu 1 . + CDS 99941 - 100762 1285 ## COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 + Term 100781 - 100818 2.2 + Prom 100896 - 100955 3.8 89 59 Tu 1 . + CDS 100981 - 101607 923 ## COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN + Term 101614 - 101654 8.2 + Prom 101638 - 101697 6.1 90 60 Tu 1 . + CDS 101752 - 102450 1088 ## NGK_0287 hypothetical protein + Term 102467 - 102509 11.2 - Term 102453 - 102495 11.2 91 61 Tu 1 . - CDS 102513 - 103340 1176 ## COG4221 Short-chain alcohol dehydrogenase of unknown specificity - Prom 103436 - 103495 5.1 + Prom 103336 - 103395 6.1 92 62 Tu 1 . + CDS 103467 - 103925 685 ## COG3909 Cytochrome c556 + Term 103943 - 103994 14.3 - Term 103930 - 103982 12.1 93 63 Op 1 . - CDS 104133 - 104351 283 ## COG1942 Uncharacterized protein, 4-oxalocrotonate tautomerase homolog - Prom 104452 - 104511 5.9 - Term 104479 - 104517 2.1 94 63 Op 2 . - CDS 104528 - 105493 1383 ## COG0042 tRNA-dihydrouridine synthase - Prom 105521 - 105580 4.5 + Prom 105502 - 105561 2.4 95 64 Op 1 . + CDS 105582 - 106541 1080 ## COG1957 Inosine-uridine nucleoside N-ribohydrolase 96 64 Op 2 . + CDS 106590 - 108143 2208 ## COG0463 Glycosyltransferases involved in cell wall biogenesis + Term 108172 - 108209 8.0 + Prom 108212 - 108271 6.5 97 65 Tu 1 . + CDS 108308 - 109069 1227 ## COG3568 Metal-dependent hydrolase + Prom 109239 - 109298 5.8 98 66 Tu 1 . + CDS 109321 - 110169 986 ## COG2878 Predicted NADH:ubiquinone oxidoreductase, subunit RnfB + Term 110311 - 110349 -0.1 - Term 110438 - 110498 12.6 99 67 Tu 1 . - CDS 110514 - 111857 1255 ## COG1012 NAD-dependent aldehyde dehydrogenases - Prom 112072 - 112131 5.1 - Term 112066 - 112135 19.8 100 68 Op 1 3/0.033 - CDS 112144 - 112974 967 ## COG2931 RTX toxins and related Ca2+-binding proteins 101 68 Op 2 . - CDS 112839 - 115601 306 ## PROTEIN SUPPORTED gi|89068227|ref|ZP_01155637.1| 30S ribosomal protein S2 - Prom 115625 - 115684 8.7 + Prom 115684 - 115743 8.3 102 69 Op 1 . + CDS 115794 - 116294 277 ## Aasi_1471 hypothetical protein 103 69 Op 2 1/0.300 + CDS 116267 - 116587 431 ## COG3293 Transposase and inactivated derivatives 104 69 Op 3 . + CDS 116584 - 117162 478 ## COG2801 Transposase and inactivated derivatives 105 70 Tu 1 . - CDS 117235 - 117477 98 ## gi|288575655|ref|ZP_05977374.2| conserved hypothetical protein - Prom 117606 - 117665 4.7 106 71 Tu 1 . + CDS 117416 - 117616 90 ## gi|325266735|ref|ZP_08133410.1| hypothetical protein HMPREF9098_1137 + Term 117623 - 117655 3.0 - Term 117610 - 117642 3.0 107 72 Tu 1 . - CDS 117692 - 117901 77 ## gi|288575656|ref|ZP_05977375.2| hypothetical protein NEIMUCOT_04649 108 73 Tu 1 . + CDS 118364 - 119593 1559 ## COG1373 Predicted ATPase (AAA+ superfamily) - Term 119489 - 119514 -0.8 109 74 Tu 1 . - CDS 119617 - 121029 837 ## NLA_8810 hypothetical protein - Prom 121127 - 121186 5.9 + Prom 121132 - 121191 4.5 110 75 Op 1 . + CDS 121414 - 121983 271 ## gi|288575657|ref|ZP_05977378.2| hypothetical protein NEIMUCOT_04652 111 75 Op 2 . + CDS 122049 - 122531 428 ## gi|261364496|ref|ZP_05977379.1| conserved hypothetical protein + Term 122556 - 122595 5.1 112 76 Tu 1 . + CDS 122624 - 123463 702 ## NLA_8220 hypothetical protein 113 77 Tu 1 . + CDS 123577 - 124236 820 ## COG4186 Predicted phosphoesterase or phosphohydrolase + Term 124254 - 124297 -0.2 114 78 Tu 1 . - CDS 124276 - 126039 1282 ## PROTEIN SUPPORTED gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 - Prom 126069 - 126128 5.1 - Term 126056 - 126107 1.3 115 79 Op 1 . - CDS 126159 - 126980 844 ## COG0491 Zn-dependent hydrolases, including glyoxylases 116 79 Op 2 . - CDS 127002 - 127175 277 ## MS2011 GloB protein 117 79 Op 3 . - CDS 127249 - 128214 1459 ## COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - Prom 128292 - 128351 3.7 + Prom 128207 - 128266 5.4 118 80 Op 1 . + CDS 128394 - 129293 983 ## COG0583 Transcriptional regulator 119 80 Op 2 . + CDS 129290 - 129760 247 ## NLA_8450 transposase 120 80 Op 3 . + CDS 129523 - 130560 579 ## COG2801 Transposase and inactivated derivatives + Term 130669 - 130708 1.1 - Term 130503 - 130543 7.3 121 81 Tu 1 . - CDS 130783 - 131790 1230 ## COG3039 Transposase and inactivated derivatives, IS5 family + Prom 132023 - 132082 11.7 122 82 Op 1 4/0.033 + CDS 132263 - 133699 1336 ## COG1696 Predicted membrane protein involved in D-alanine export 123 82 Op 2 2/0.300 + CDS 133715 - 134791 1133 ## COG2845 Uncharacterized protein conserved in bacteria + Term 134811 - 134852 3.0 + Prom 134801 - 134860 4.4 124 83 Tu 1 . + CDS 134905 - 136014 1542 ## COG2755 Lysophospholipase L1 and related esterases + Term 136016 - 136065 15.4 + Prom 136274 - 136333 5.2 125 84 Op 1 31/0.000 + CDS 136362 - 137186 1185 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 126 84 Op 2 34/0.000 + CDS 137230 - 137892 816 ## COG0765 ABC-type amino acid transport system, permease component 127 84 Op 3 . + CDS 137902 - 138669 667 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Prom 138928 - 138987 2.4 128 85 Tu 1 . + CDS 139018 - 140940 2084 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains + Prom 140963 - 141022 3.6 129 86 Tu 1 . + CDS 141074 - 141442 219 ## gi|255066830|ref|ZP_05318685.1| nucleolar protein + Prom 141487 - 141546 5.5 130 87 Tu 1 . + CDS 141598 - 142149 356 ## NGK_1093 periplasmic protein - Term 142388 - 142450 21.1 131 88 Tu 1 . - CDS 142464 - 143237 1150 ## COG1469 Uncharacterized conserved protein - Prom 143314 - 143373 3.9 + Prom 143330 - 143389 4.1 132 89 Op 1 . + CDS 143419 - 144576 1655 ## COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases + Prom 144608 - 144667 2.5 133 89 Op 2 . + CDS 144774 - 145232 349 ## gi|261364518|ref|ZP_05977401.1| conserved hypothetical protein + Term 145258 - 145308 14.7 + Prom 145268 - 145327 2.0 134 90 Op 1 . + CDS 145360 - 146139 1022 ## COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 135 90 Op 2 . + CDS 146166 - 147344 687 ## PROTEIN SUPPORTED gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 136 90 Op 3 . + CDS 147403 - 148071 205 ## ebA2861 hypothetical protein + Term 148110 - 148151 5.9 - Term 148087 - 148150 15.1 137 91 Tu 1 . - CDS 148171 - 148296 71 ## - Prom 148537 - 148596 8.6 + Prom 148534 - 148593 11.1 138 92 Tu 1 . + CDS 148715 - 151186 3145 ## COG2217 Cation transport ATPase + Term 151206 - 151254 5.1 - Term 151449 - 151497 16.4 139 93 Tu 1 . - CDS 151524 - 153551 2710 ## COG1292 Choline-glycine betaine transporter + Prom 153955 - 154014 5.2 140 94 Tu 1 . + CDS 154035 - 154826 1147 ## COG0171 NAD synthase + Prom 154855 - 154914 2.8 141 95 Tu 1 . + CDS 154983 - 157007 2671 ## COG4389 Site-specific recombinase Predicted protein(s) >gi|257257250|gb|ACDX02000005.1| GENE 1 3 - 1592 2153 529 aa, chain + ## HITS:1 COG:STM0291 KEGG:ns NR:ns ## COG: STM0291 COG3209 # Protein_GI_number: 16763674 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Salmonella typhimurium LT2 # 7 529 628 1167 1364 146 29.0 8e-35 YEYGQDGLPTRRTNALGHTFGYHYDKARRLVGLTNENGARYRFAYDVLDRLIAESGFDHK LTGYHYNAGNELVEQREFGDDASLAAKLMAQLGGQPVPKRDAAPLSDDLDSQTPLRITEF KRDILGRLIHTLARDNDKVQETAYQYDPDGNLVRAANRHSITCFDYNENGQLIARHQWKV PSKEENARNGLPETDWRDAQYDMLYLPVTETVRYHYDFNGNRTATVLPDGRQINYLYYGS GHLHQISLDDEVITDIERDRLHREIYRTQGKLASRYELDPLGRLKKQIATLNDLTEGGKG KGKTKVAAGYGQTAVKRSYGYDRTGNLSHSTDQRTGTTQFEYDTLGRITKAGSERFAFDP AHNILSDGLNAVTDNRLKTYNGTTYYYDDLGNLIHRELADGEVQNYFYDLHDQLVKAEIF KKDGTKETWAYTYDALGRRIGKGRLKDGEVSGSLEDATGFVWDGSHLLQEVHPDGRYTYI YTDPDSYEPLAQVHNRTNEDGENRQQTHYFHCDQIGIPREMTDKDGNLL >gi|257257250|gb|ACDX02000005.1| GENE 2 1773 - 2306 315 177 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261364387|ref|ZP_05977270.1| ## NR: gi|261364387|ref|ZP_05977270.1| protein, Rhs family [Neisseria mucosa ATCC 25996] protein, Rhs family [Neisseria mucosa ATCC 25996] # 1 177 1 177 177 328 100.0 1e-88 MGGENLYAFAPNVKGWVDPLGLWAFIPALLSGLLVAGRVAISLLSKVGKMGYKAAKQCVG KCKNLGKPKSPDKLLKNGKVDHKDIQAWAKKQNLQNQWKSDPQKFPNGGFKYNDGTYSVH GHGANPAAQVKFPTSNAAQGPTVRITGPKGSLRTDGTWGPFKSDPNGAHIPLKNSPY >gi|257257250|gb|ACDX02000005.1| GENE 3 2319 - 2642 147 107 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|322387667|ref|ZP_08061276.1| ## NR: gi|322387667|ref|ZP_08061276.1| hypothetical protein HMPREF9423_0674 [Streptococcus infantis ATCC 700779] hypothetical protein HMPREF9423_0674 [Streptococcus infantis ATCC 700779] # 1 107 1 107 107 164 94.0 2e-39 MNSIFKLNEKLENLPSILSIEDELFFIDRLQTLPIDEIRKNKEIFKRIILAIQESHQDNG IFEITDENIKIFFEFVIWIRNLKKLYNLDFEKYIDGLDTNFDGSKQI >gi|257257250|gb|ACDX02000005.1| GENE 4 2828 - 4171 1785 447 aa, chain + ## HITS:1 COG:PA2684 KEGG:ns NR:ns ## COG: PA2684 COG3209 # Protein_GI_number: 15597880 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Pseudomonas aeruginosa # 121 426 267 578 1317 149 34.0 1e-35 MFESEQIWFSKNPDGHYVIASLDGSIALRFAPLVVAEDGSDEDSTLFPLVAVEDANGNHQ RFVYHPLTGLPQYVIDGNDRVFSLNFGNVADGQSPKMRLLSVSLLEGLPVFGEAVRVGSP LVRYEYNSSGDLLRVIGRDGKVKRSFGYKNNLMVSHTDAAGLVSEYEYDHYTPTGKVLRN RTSLGEEWRFTYHDGYTEVTDVLGRTEQYHYDYNNELTKRVFADGSAVLMERDGLGRLLS HTDAMGRVTRYQYSNEGQVETIVRPDGAILHFDYDDCYRLIRKSDAEGRYDGYTYDEAGN LLTHTDPLKHTTRFEYADNGLLLSVTDPNGSSTTYHYNENRQPDLITDCSGYETRLDYTP EGQLARITDALGQRTEYHYDADQNLTLALYPDGSKETFGYDAAGRLKTHTDGEGHTTSYE YGQDGLRPLQNSPKSPKFPPRHLGDFS >gi|257257250|gb|ACDX02000005.1| GENE 5 4168 - 5175 1232 335 aa, chain + ## HITS:1 COG:NMB1539 KEGG:ns NR:ns ## COG: NMB1539 COG3039 # Protein_GI_number: 15677391 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS5 family # Organism: Neisseria meningitidis MC58 # 1 335 1 335 335 616 92.0 1e-176 MSTFFQQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQRTRYLRDHRGRPAYPLLSM FKAVLLGQWHSLSDPELEHSLITRIDFNLFCRFDELSIPDYSTLCRYRNWLAQDNTLSEL LELINRQLTEKGLKVEKASAAVIDATIIQTAGSKQRQAIEVDEEGQVSGQTTPGKDSDAR RTKKNGLYKLGYKQHTRTDEEGCIGKLHITPANAHECSHLPPLPEGIAEGTTVYADKGYD SKENRQHLKEHRLLDGIMRKAHRNRPLTEDQTKRNRYLSKTRYVVEQSFGTLHRKFRYAR AAYFGLVKVSAQSHLKAMCLNLLKAANKLSVPVAA >gi|257257250|gb|ACDX02000005.1| GENE 6 5342 - 7822 3845 826 aa, chain - ## HITS:1 COG:glgP KEGG:ns NR:ns ## COG: glgP COG0058 # Protein_GI_number: 16131302 # Func_class: G Carbohydrate transport and metabolism # Function: Glucan phosphorylase # Organism: Escherichia coli K12 # 11 819 5 815 815 986 59.0 0 MAKKKQPISGFDYVMPKPDAETIRKSIVYKLIFILGVDPKEATEHQWLNAAMLAARDLIA EDFLQTRRAHIDNGKRMVYYLSMEFLLGRAFVNALINEGVYAEFEEAFKQLGKEFADVCE QEQDPGLGNGGLGRLAACFLDSLATLRIPAMGYGIRYQYGMFKQEIVDGQQVEKPDLWLD QDLAWQIGRPNKQYAVSFGGQVINMGDKKEWHPSEEISAMAYDEIIPGYGGDIANPLRLW TAHAGNRFDLADFNRGDYASAVRAQNSDENISRVLYPNDSTDSGRELRLKQEYFLVSASV QDIVARHKCRFPSIKNLADKVAIHLNDTHPVLAIPELMRILIDEEGIAWTEAWNMCCKIF SYTNHTLMSEALETWPVDLMGRLLPRHLDIIFEINAYFLNALRAIGNFDDDFVRRVSIID ETHGRRVRMAWLAVIGSHKVNGVAKIHSDLMTTSIFADFAKVFPERFTNVTNGVTPRRWI NIANPELTRFLDKHLGEQDWRLHLDNLTKLNEKVDDASVQAEFGAVKKAAKERLAKYIET ELGIKVNTDALFDIQIKRIHEYKRQALNLMHIVDRYNKILENPDFDWQPRVFIFAGKAAS AYYMAKKIIRLINDVAKTINNDERIRDLIKVVYIPNYSVSLAQIIIPAADLHEQISLAGT EASGTSNMKFALNGALCMGTLDGANVEILEKVGADNCFIFGNTVEQVEEIRRNGYDPLSY IERDNDLRRVVNQISNGTFSPEEPNRYNDVLQPYGDFYQLMADFRSYIDTQYKADEHYRD VAAWRKSALINIANMGFFSSDRSIADYCRDIWYIKPLTLKELPKHQ >gi|257257250|gb|ACDX02000005.1| GENE 7 8141 - 10141 1891 666 aa, chain - ## HITS:1 COG:HI1358 KEGG:ns NR:ns ## COG: HI1358 COG1523 # Protein_GI_number: 16273268 # Func_class: G Carbohydrate transport and metabolism # Function: Type II secretory pathway, pullulanase PulA and related glycosidases # Organism: Haemophilus influenzae # 11 630 8 631 659 661 52.0 0 MKTKTWRIEEGAPYPMGVSLTEEGANFALFSIHAEKVELCLFDKGEETRLEMPSRRGSVF YGFVPEVGAGQQYSFRVYGRADAPSGSCFNPNKLLIDPYSKKIDGKPSYRDDEEMAWFRP EDERDNAAMAPKSVVVGDDGFDWSNDRRPNHPWGRTVVYEAHIKGFTKQFPDLEHAGTYQ ALTDPRVIDYLKNLGVTAVELLPIHQHLDEYHLQKMGLSNYWGYNTYSHFAVEPSYAADA ERAAEEFKQAVKTLHQAGLEVILDVVYNHTAEQDEKGPMLCQRGIDNALWYWLKPDGSYE NWSGCGNTLNIVRRDVTRWAADSLRYWAEEFHVDGFRFDLGTVLGREPDFQAYGRFFQVV YQDPVLARCKLIVEAWDIGEGGYHLGNFAQPFAEWNGRFRDDMRAFWVWESGNLGAFAER LAGSSDIFNHSGRHPSASINFITAHDGFTLRDLVSYNEKHNHANGEDNRDGHNENISYNH GIEGETEDAAILEDRSYTAKALLTSLFLANGTPMLLAGDEFGNSQQGNNNSYCQDNPITW LDWHQADEALQNYTRDLIRLRQEIKLLGDDVWWEKERVGWLNAEGEPMSEICWHNRGAKA MQIMLDDEWLLLVNAKRGRQLFNLPQGSWQLSCVPSEKFNYNQDGKLTVEHMGIWVLHRT DASPDK >gi|257257250|gb|ACDX02000005.1| GENE 8 10426 - 11481 942 351 aa, chain - ## HITS:1 COG:PM1983 KEGG:ns NR:ns ## COG: PM1983 COG0845 # Protein_GI_number: 15603848 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Pasteurella multocida # 33 351 78 368 368 237 45.0 3e-62 MKKAVIASLAVALVAGGAWYVLQNQKETLPAWIAQSNGRLELNRIDVASLYPGRVKAVLV EEGADVNEGDILAELSSETSSSRLEEARAAELRQEEAVGRAKAAEAQMKQTVARAQANVD ANRQQLRVAKMELDNARKLLADQLVSQSEVTKRQADYERAVAAVKAAEAARDEARATVAQ SAAAQAEARAGVEQARAAVKSATSANDDMNIRAPIAGRVEYTMAEAGNVVAAGSKVVSLL DPADVSMNIFLPTDSISRLKVNDEARIRLDGIDAVFPAKIKFIATDAQFTPKSVETVDER AKLMFKVKLQVPRETAVKYNRLLKGGLTGNGFVKTDDKGAWPAELAVRLPN >gi|257257250|gb|ACDX02000005.1| GENE 9 11502 - 12011 405 169 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261364395|ref|ZP_05977278.1| ## NR: gi|261364395|ref|ZP_05977278.1| hypothetical protein NEIMUCOT_04511 [Neisseria mucosa ATCC 25996] hypothetical protein NEIMUCOT_04511 [Neisseria mucosa ATCC 25996] # 1 169 55 223 223 344 100.0 1e-93 MFADKDEFVKAMLIEYSNRALGRVSFDFAQNIEDTERLYQIVWRLAVTIREHLAWIHRML LDSEEGVDLITKALKKQHKMLAYGMIRHIKACNGREGVPQLELLNQFEFLNGAVISPMIM NTRYRMLGILTDEMNGRHEDLLTDSSIHQRIDWAFAALFPQYRSKARPF >gi|257257250|gb|ACDX02000005.1| GENE 10 11778 - 12215 87 145 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLLFQRLGNQIDALFAIQQHPVYPRQMLAYRNRQPPDNLIQPLRIFDILGKIERHPPQSP IAVLNQHRLHKFVFVGKHPVERFQIRIQMLRDRLLGQPLVAASGIKMNACGNKLRTGHTV HYLHLICLYCCHRTNIQNSNETKIF >gi|257257250|gb|ACDX02000005.1| GENE 11 12585 - 13619 1465 344 aa, chain - ## HITS:1 COG:NMA1164 KEGG:ns NR:ns ## COG: NMA1164 COG0547 # Protein_GI_number: 15794110 # Func_class: E Amino acid transport and metabolism # Function: Anthranilate phosphoribosyltransferase # Organism: Neisseria meningitidis Z2491 # 1 340 1 340 352 529 87.0 1e-150 MITPQQAIERLISNNELFYDEMTDLMRQIMSGQVPPEQIAAILTGLRIKVETVSEITAAA AVMREFAAKVPLENSDDLVDIVGTGGDGAKTFNISTTSMFVAAAAGAKVAKHGGRSVSSS SGAADVMEQMGAVLNITPEQVAESIRQTGLGFMFAQNHHSAMRHVAPVRRSLGFRSIFNI LGPLTNPAGAPNQLLGVFHIDLCGILSRVLKQLCSKHVLVVCGEGGLDEITLTGKTRVAE LKDGEIREYDISPADFGIEIRRDLDEIKVVNAQESLEKMDEVLSGKHGAARDIVLLNAAA ALYAGNVVPSLADGVKAAEAAIDSGKAKAKKEEFIRFTQQFAKE >gi|257257250|gb|ACDX02000005.1| GENE 12 13686 - 14276 723 196 aa, chain - ## HITS:1 COG:NMB0966 KEGG:ns NR:ns ## COG: NMB0966 COG0512 # Protein_GI_number: 15676859 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component II # Organism: Neisseria meningitidis MC58 # 1 192 1 192 196 366 88.0 1e-101 MLLFIDNYDSFTYNIVQYFAELGQEVVVRRNDDITLEEIEALKPQYLVIGPGPCSPKEAG ISVAAMRHFAGKLPIMGVCLGHQTIGEAFGGDVVRAKTMMHGKVSPVFHLNKGMFKDLPD PVTCTRYHSLVIARDTLPDCLEVTAWTEDQEIMGVRHKEYAVEGVQFHPEALLTEHGHDM LKNFLEEFKDFQASAA >gi|257257250|gb|ACDX02000005.1| GENE 13 14291 - 14626 283 111 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261364398|ref|ZP_05977281.1| ## NR: gi|261364398|ref|ZP_05977281.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 111 1 111 111 216 100.0 5e-55 MNDADDYLSKMPFFIVFLDPLHTDFHSSGKPLNEYIARHPLMHDKLHRPAFAAKVLEMAA NSCNMRVFVRKADALIKHPLHYIVRNGVFRTEEQMWAFINSPENIAAVKQP >gi|257257250|gb|ACDX02000005.1| GENE 14 14769 - 15647 1205 292 aa, chain + ## HITS:1 COG:no KEGG:FIC_02536 NR:ns ## KEGG: FIC_02536 # Name: not_defined # Def: JmjC domain protein # Organism: F.bacterium # Pathway: not_defined # 1 292 1 293 293 456 73.0 1e-127 MGFKLTPIDVVENISREDFYQNYLKPRRPVVIKGLTRNWPARDKWSLDYMKETVGDIVVP LYDSAKADPSAPINAASTEMRFSDYIDLIKREPTDLRIFLFDPIKHAPALLNDYVFPKEL MGGFLDRYPTLFFGGAGSETFLHYDIDMAHIFHTHFGKKHIILFDYKWKERLFRIPFATY ALEDYHVDNPDTERFPELEGVEGIECFLEYGDTLFMPTGWWHWMKYLDGSFSISLRAWDE SWAVKAHSLWNLTVQRKFDDFMKARFKARYMNWKEQLACKRARRAWEHGLPR >gi|257257250|gb|ACDX02000005.1| GENE 15 15714 - 16175 439 153 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|288575594|ref|ZP_05977283.2| ## NR: gi|288575594|ref|ZP_05977283.2| lipoic acid synthetase [Neisseria mucosa ATCC 25996] lipoic acid synthetase [Neisseria mucosa ATCC 25996] # 1 140 6 145 158 213 100.0 4e-54 MNKLILSTLLLAFSAVATASPVFECIDKSGRKTYTQTGGKNCKPGNIGKPSIYTSAAPSA HSASASVASRNAPSEQMPPPPAGAMSGSSSAQNELAQAQKNLEEGKQVRYGNERNYARYQ ERIKGLENQVRAAQDRINAAGGMGGEGEMMPEY >gi|257257250|gb|ACDX02000005.1| GENE 16 16198 - 16392 129 64 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225076062|ref|ZP_03719261.1| ## NR: gi|225076062|ref|ZP_03719261.1| hypothetical protein NEIFLAOT_01094 [Neisseria flavescens NRL30031/H210] hypothetical protein NEIFLAOT_01094 [Neisseria flavescens NRL30031/H210] # 1 64 33 96 96 103 84.0 4e-21 METEKIYYAVIILLCAASMLLSPFFYIRRTRSGAELRHAPRQWKPIIIANLVMIIALVVW WIWF >gi|257257250|gb|ACDX02000005.1| GENE 17 16492 - 18120 2616 542 aa, chain + ## HITS:1 COG:NMA1409 KEGG:ns NR:ns ## COG: NMA1409 COG0488 # Protein_GI_number: 15794321 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Neisseria meningitidis Z2491 # 1 542 1 542 542 1036 96.0 0 MISTNGITMQFGAKPLFENVSVKFGEGNRYGLIGANGSGKSTFMKILGGDLEQTAGEVAI ENGVRLGKLRQDQFAYEDMRVLDVVMMGHTEMWAAMTERDAIYANLEATEDDYMKAAELE AKFAEYDGYTAEARAAELLSGVGISEDLHNATMAEVAPGFKLRVLLAQALFSKPDVLLLD EPTNNLDINTIRWLEGVLNQYDSTMIIISHDRHFLNEVCTHMADLDYNTITIYPGNYDDY MLASAQSRERALKDNAKAKEKLQELQEFVARFSANKSKARQATSRLKQADKIKAEMVEVK PSTRQNPYIRFEADEKAKLHRQAVEVENLAKRFETQLFKNLSFILEAGQRLAIIGPNGAG KSTLLKLLAGAFKPEYAEGIAPDAGTIKWAEKANVGYYPQDHENDFDVDMNLSEWMRQWG QEGDDEQVIRGTLGRLLFGSNDVVKKVQVLSGGEKGRMLYGKLLLLKPNVLIMDEPTNHM DMESIESLNMALEKYNGTLIFVSHDRQFVSSLATQIIELDGKGGYEHYLGDYESYLEKKG LA >gi|257257250|gb|ACDX02000005.1| GENE 18 18543 - 19124 473 193 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent [Streptococcus pneumoniae TIGR4] # 5 193 5 199 201 186 46 4e-46 MEHKLPQLPYELDALSPHLSKETLEFHYGKHHQTYITNLNNQIKGTEFENLSLEEIVKKS SGGVFNNAAQTWNHTFYWLGFTPKGQGKPSGELAAAIDAKWGSFEKFQEAFNACAAGTFG SGWAWLVKTPAGELDLVSTSNAATPLTTENTPLLTCDVWEHAYYIDYRNSRPNYLKGFWE IVNWDEVAKRFAA >gi|257257250|gb|ACDX02000005.1| GENE 19 19293 - 20699 1302 468 aa, chain + ## HITS:1 COG:NMA1105 KEGG:ns NR:ns ## COG: NMA1105 COG0305 # Protein_GI_number: 15794052 # Func_class: L Replication, recombination and repair # Function: Replicative DNA helicase # Organism: Neisseria meningitidis Z2491 # 1 468 1 468 468 831 94.0 0 MNDYPDTSSEDREVSALSLPPHSMEAEQSVLGGLLLENSAWDRIADVVTGEDFYRHEHRL IFRAIANLINESRPADVITVQESLERNEELEAAGGFNYLITLAQNTPSAANIRRYAEIVR ERSIMRQLAEVGTEIARSAYNPQGRDAGQLLDEAENKVFQIAESTAKSKQGFLEMPALLK EVVERIDMLYSRDNPDEVTGVSTGFIDLDKKTSGLQPGDLIIVAGRPSMGKTAFSINIAE HVAVEGKLPVAVFSMEMGGAQLVMRMLGSVGRLDQSVLKTGRLEDEHWGRLNEAVVKLSD APMYIDETPGLTALELRARARRLARQFNGKLGLIVIDYLQLMAGSGRSDNRASELGEISR SLKALAKELQVPVIALSQLSRTVEQRTDKRPMMSDLRESGAIEQDADLIMFMYRDEYYNQ ESPMKGLAECIIGKHRNGPVGKVFLTWMGQFTKFDNAAYIPESALMED >gi|257257250|gb|ACDX02000005.1| GENE 20 20856 - 21548 546 230 aa, chain + ## HITS:1 COG:NMA1106 KEGG:ns NR:ns ## COG: NMA1106 COG4970 # Protein_GI_number: 15794053 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein FimT # Organism: Neisseria meningitidis Z2491 # 4 220 5 220 221 256 54.0 3e-68 MYAQQKGFTLIELLVVIAITAIMATIALPNMSEWIASRRAASQAEQVANLLRFARAEAVR LNLPVYVCPVKVRKHGLADGTCDSSQKSSGLLAYADTNRDITYKNDTSDISLRSIVLNGT DPAKVSHTFQHVAFGKDNADDGEAVFWSFMPNGTFGYTTSKTLDKSTTFKYADGYIKISM TDSSATTEKTKKSRASIVLIDSSGRVEICAKSDSRPLCQYSESQSPEPKK >gi|257257250|gb|ACDX02000005.1| GENE 21 21561 - 22265 604 234 aa, chain + ## HITS:1 COG:NMB0887 KEGG:ns NR:ns ## COG: NMB0887 COG4967 # Protein_GI_number: 15676783 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein PilV # Organism: Neisseria meningitidis MC58 # 29 234 12 203 204 152 43.0 5e-37 MKYITLHTKGRLKTSKASFAKTRYSDFYKPKQAGMTLIEVLVAMFVLAIGVLALLAIQLR TVSSVREAEGQTIVSQLTQNLVEGMLINPRLEKCDAPQTGATTSGRDRGWCKNYSDYYTT YGDSSTEPLKKGPVKVSMSKEELANAQLGQFHDALDKAFRDSDISDFYYVVCRDGKNKEP TFKGGKFKPECHEDKTADTVIKVLWLKDAENDKAASSKSDDPIVYTYQVRVRER >gi|257257250|gb|ACDX02000005.1| GENE 22 22265 - 23290 556 341 aa, chain + ## HITS:1 COG:NMA1108 KEGG:ns NR:ns ## COG: NMA1108 COG4966 # Protein_GI_number: 15794055 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein PilW # Organism: Neisseria meningitidis Z2491 # 14 341 15 332 332 252 44.0 8e-67 MNKKNRPHIPVKAGMQGFSLIEFLVASALSMIVLLAVSSGYFTARSLNTAATSRLNVQQD LRNASNQIVRDARMAGNFGCFNMSGYDTQAVIKDFGSKEFFTLKNGQMLSAVRETNDLGA TGFKPSSKSKALIFQYGIDAENPKNLKAETAVASSCTNITKPGNQITDVKAALAALNLKT DSSQAGNISIMKHEVNAYAVGTAGGQEGLYRFQLAENGEWSNPQLLIKGIKSMKIRYFYA EKCPQTDVESRAASAPPTGNTQNQGQTQGQDETFTYSDELPPKDPDLAKETPASIELLLN SNDKRELGSINAAGSNDKNEVQIYRINATIRGGNKCADRLL >gi|257257250|gb|ACDX02000005.1| GENE 23 23269 - 23868 355 199 aa, chain + ## HITS:1 COG:NMA1109 KEGG:ns NR:ns ## COG: NMA1109 COG4726 # Protein_GI_number: 15794056 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein PilX # Organism: Neisseria meningitidis Z2491 # 1 198 1 194 197 148 50.0 6e-36 MRRPITLNHPAKASAQTGFALFIVLMIMIVIALLVVTATQSYNTEQRISTNDADHKFATT LAEAALREGENHIYEIEDGKKPFTDDCADGLCKAAQVSKNTYVATAGTITVNGTSSVEAW IREDDKCINSENRKKTKCIDVNGIKYPGVNSGAKKDARYIIEYLSTNSTDNRTIYRVTAK AWGKNENTVVILQSYVANE >gi|257257250|gb|ACDX02000005.1| GENE 24 23886 - 24377 589 163 aa, chain + ## HITS:1 COG:NMB0890 KEGG:ns NR:ns ## COG: NMB0890 COG4969 # Protein_GI_number: 15676786 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, major pilin PilA # Organism: Neisseria meningitidis MC58 # 1 163 1 161 162 136 47.0 1e-32 MNTSITKSQGFTLVEMLIVVAIIGILSTIAYPSYIHYIERGYQSQAHTELLAINNALKTE LVKNPTLKIKDKIEGDTGLVKTYKAAPEVAAKYDFSGEMKNKDAKNSRAYYLFATPKKGT DYKLSVWMDSLGNAYKCTDAESAKAKSTSKNGNTGCEQVGYKK >gi|257257250|gb|ACDX02000005.1| GENE 25 24550 - 25386 1188 278 aa, chain - ## HITS:1 COG:NMB0871 KEGG:ns NR:ns ## COG: NMB0871 COG0414 # Protein_GI_number: 15676767 # Func_class: H Coenzyme transport and metabolism # Function: Panthothenate synthetase # Organism: Neisseria meningitidis MC58 # 1 277 1 277 278 478 85.0 1e-135 MQIIHTIKELREWRKNAGSVAFVPTMGNLHEGHLALVREAKKRADNVVVSIFVNRLQFGQ GEDFDKYPRTLQQDADKLANEGVAVVFAPDEKELYPNVEQRFNVEPPNLQNELCGKFRPG HFRGVATVVSKLFNIVQPDTACFGKKDYQQLAIIKGFVEDLNFNIDIVPVDTGRAPDGLA LSSRNQYLSEAERAEAPRLYRELQRVAAELKNGNLDYAGLETETVRRLTEAGWMVDYVEI RHAESLAVARTGDKALIVLAAARLGTTRLIDNLEVSLA >gi|257257250|gb|ACDX02000005.1| GENE 26 25712 - 26500 990 262 aa, chain - ## HITS:1 COG:NMA1088 KEGG:ns NR:ns ## COG: NMA1088 COG0413 # Protein_GI_number: 15794036 # Func_class: H Coenzyme transport and metabolism # Function: Ketopantoate hydroxymethyltransferase # Organism: Neisseria meningitidis Z2491 # 1 262 1 262 263 432 92.0 1e-121 MITVNTLQKMKAEGEKIAMLTAYESSFAALMDHAGVDVLLVGDSLGMTVQGRKSTLPVSL RDMCYHTENVARGTENAMIVSDLPFGAYQQSKEQAFAAAAELMAAGAHMVKLEGGVWMAE TTEFLQMRGIPVCAHIGLTPQSVFAFGGYKVQGRGDKAEALLADAKAHDQAGAAIVLMEC VPAELAKKVTETVSCPTIGIGAGVDCDGQVLVMHDMLGIFPGKTAKFVKNFMQGKDSVQA AVEAYVHEVKAKTFPATEHSFA >gi|257257250|gb|ACDX02000005.1| GENE 27 27071 - 27862 1207 263 aa, chain + ## HITS:1 COG:NMA1087 KEGG:ns NR:ns ## COG: NMA1087 COG0421 # Protein_GI_number: 15794035 # Func_class: E Amino acid transport and metabolism # Function: Spermidine synthase # Organism: Neisseria meningitidis Z2491 # 1 263 1 263 263 497 88.0 1e-141 MPRHPYRRLRPAKSDLPEVGISEEGNIRSLHLGSDTIQSSMNLDHPAELVLSYSRAMMGW LLFAEEKPKHITQIGLGGGSFARWIDSYLPDTKQTAVDINPQVIAVARSLFELPFEGENF EIVEADGAEYIKVFRHNTDVILVDGFDGEQIIDALVEEPFFQDCRNALSPDGVFVTNWWS GDKRYQRFVERLLNVFEGRVLELPAESHGNMAVMAFQSSPKEQNLDKLKKRAEKLSEQYG LDFKRMLTDLKASNPNNGKHFYL >gi|257257250|gb|ACDX02000005.1| GENE 28 28012 - 29265 1311 417 aa, chain + ## HITS:1 COG:NMA0760 KEGG:ns NR:ns ## COG: NMA0760 COG0373 # Protein_GI_number: 15793735 # Func_class: H Coenzyme transport and metabolism # Function: Glutamyl-tRNA reductase # Organism: Neisseria meningitidis Z2491 # 1 415 1 415 415 657 84.0 0 MQLTAVGLNHQTAPLSIREKLAFAAEHLPDAVRALAHSPAADEAVILSTCNRTELYCVGN TERIIEWLAEYHNLPIEEIRPYLYTLDNNETIRHAFRVACGLDSMVLGEPQILGQIKDAV RIAQEQESINSHLNALFQKTFSVAKEIRTDTAVGENSVSMASASVKMAEQIFPDIADLNV LFIGAGEMIELVATYFAAKNPKLITVTNRTLPRAQELCDKLGITAEPRLLTDLPEILHEY DVVVSSTASQLPLVGKGMVERALKQRHNMPVFLLDLAVPRDIEAEVGELGDAYLYTVDDM MNIVQSGKESRQKAAAAAEAMVEEKVGEFIQQQKSRQSVPLIRALRDEGERARRQVLENA MKQLAKGTSPEEVLERLSIQLTNKLLHSPTRTLNKAGSTDSDLVEAVAQIYHLEKND >gi|257257250|gb|ACDX02000005.1| GENE 29 29802 - 30104 276 100 aa, chain - ## HITS:1 COG:PM1481 KEGG:ns NR:ns ## COG: PM1481 COG0640 # Protein_GI_number: 15603346 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Pasteurella multocida # 11 96 9 94 95 101 56.0 3e-22 MTTADNQPPYEEATAFLKLLANPHRLVVLCKLHERPHNVTELAESSGLPQAAMSSQLALL REAGLVSFEVNHRERQYYIADPRVNEMIQLLYSFFCAEKD >gi|257257250|gb|ACDX02000005.1| GENE 30 30184 - 30705 608 173 aa, chain - ## HITS:1 COG:PM1480 KEGG:ns NR:ns ## COG: PM1480 COG0607 # Protein_GI_number: 15603345 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Pasteurella multocida # 18 173 14 173 174 136 50.0 2e-32 MSKEGQLPRITPAKAAAKIREGALAVDIRSQAEYRGGHIGGALSLPPERHRDKLPENTAS CLIFYCLGGKRTAQAEAALAELGQGRECYILEGGLQAWKAAGLSIVAEHAAPDIMRQVQT IAGGLVLFGVLAGWLVSPWFYLIDALVGAGLLTAGLTGFCGMARLLAKMPWNR >gi|257257250|gb|ACDX02000005.1| GENE 31 30718 - 30912 288 64 aa, chain - ## HITS:1 COG:no KEGG:Alide2_3744 NR:ns ## KEGG: Alide2_3744 # Name: not_defined # Def: hypothetical protein # Organism: A.denitrificans_K601 # Pathway: not_defined # 1 63 1 63 65 79 65.0 4e-14 MKRNLGTLDRTLRIVIGVALIAAAATGQIGWWGWLGIIPLATALIGNCALYSLLGINTCH INKK >gi|257257250|gb|ACDX02000005.1| GENE 32 32022 - 32714 929 230 aa, chain - ## HITS:1 COG:RSp0354 KEGG:ns NR:ns ## COG: RSp0354 COG0644 # Protein_GI_number: 17548575 # Func_class: C Energy production and conversion # Function: Dehydrogenases (flavoproteins) # Organism: Ralstonia solanacearum # 2 223 192 413 419 209 47.0 5e-54 MAHFTRITDNIAAEADFDRNKILITTHPQHRDVWFWTIPFGDNTCSLGVVGTPDKLAGDS EAVLKQIVAECPNLVEFFKHSEWENGFPYRSIQGYSAHVKALHGKHFALLGNAAEFIDPV FSSGVTIALHSAKLAADLLARQLKGEAADWQREFAEPLMVGVNAFRTYVDGWYDNRFQNV VYAPNRAPEISRMISAILAGYAWDTANPFVEKSEQRLNTLAELVGDLAFE >gi|257257250|gb|ACDX02000005.1| GENE 33 33152 - 34306 1616 384 aa, chain - ## HITS:1 COG:BMEII0793 KEGG:ns NR:ns ## COG: BMEII0793 COG1566 # Protein_GI_number: 17989138 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Brucella melitensis # 66 383 1 319 325 237 46.0 3e-62 MSQPDTPEQPDTESQKTAVPQPEMQPETSSETPSEPQEPAQWQPEKHRFGSIGILAASAI GVVLALYAFRLPPFGMGEVYTNNAYVRGSVTAVSPRVGGYVQKVLVRDFDNVKAGQPLVE IDPAPYRAKVAQAEAGLAGQQAALNKTAQDKASAIAVSKANQAAIDNARAQLDRARREWQ RIQAVSADAVSQSSRDAAQTAVKQAEAGLKQAQEQYAVAQQNIINTGVGREGAQAGIANA QALLDLAKQDLGHTVIYAPASGKLGEVSVKQGQLVSAGTQLMSVVPPERWIIANIKETDM ANVKIGQSASVSIDALGGKAFSGKVAEISPATASEFSLIKADSGTGNFVKIAQRIAVKIV FDAGQQDLERLAPGMSAEVNIATK >gi|257257250|gb|ACDX02000005.1| GENE 34 34572 - 36233 2407 553 aa, chain - ## HITS:1 COG:AGc2011 KEGG:ns NR:ns ## COG: AGc2011 COG0477 # Protein_GI_number: 15888429 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 18 533 49 565 583 219 29.0 1e-56 MPLQSGGYTFKPHEMPFMPGSPASPEHPKKRRLAYLAIGLLLALSSGFQNGLLTASLPQL RGDLSLDLQQGGWIQAAYYMAYACMSILFFKIRKAYGLQRFVRITLFAQLAASLLQLVYH HYEVELIACVAAAIAASGLLVLSIYYMMQGFTGTKKLVGLVFGLGLMQVGTPLAQSLVPL LYGDGDLNGVFAFQATLALACTACLFALPLPPGITVRKSFTLTDALSFTLFASGIALLCA FLVQGRTVWWTTQWLGWLLAGGVGLTGLALYIESTRHKPMLDWHWMTVPQILIFAVMGAM ARLLTSEQTVGAAGLMGAVGVGSAQMSTFYLIVAGGMLAGVVGSLILLDINDIRRPVMIA LACFALGAWLEIGVGMQTRPAQLYFSQFIVAFASLLFMGPMMLEGALRALAKSPDHMMSF SAVFGLSQTLGGLAGAAAFSAFLTYRTRDHLAAIAQNLTLSNPALAADIQRNAAALSTTL SDPVLLQGRAVSQITAQAGKEASVAAYSDLFALLAAMAAVSTLVAVALWLYRRYYKIDIL AAEKAKVFAALGK >gi|257257250|gb|ACDX02000005.1| GENE 35 36299 - 37720 1040 473 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|288575609|ref|ZP_05977304.2| ## NR: gi|288575609|ref|ZP_05977304.2| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 473 2 474 474 946 100.0 0 MTLTGILERSLGGFTCLRGFASIKELAKHSRAEFSYQRELNEQHIEEIKHYFGQREYLFF PEIILGHRLASDAPIALAQDESQLLNIGEKKNYPIDIALTEAKSRKGAFKNLKLASFTIE KESLLLRIDGNHRLSAIDQSDERDYQVPFCLILFSDSDVDNKQQSVIFHYINSRGVPLTL EENLLAIFQKNRFSNDEIQRHFGKGFLFAKDLFESVDEEHIPHIAEFCKKEKCRCSLLKN ITELLNEHLGENCSAATIKSKIHKVEDIIANSEDIKNHLSVSLLTVMCIFAVKDNGKWFT AFINWIKGNRLYQLQNINPQSMIDLFEQIYSNEIKIFVAMPYYDDSTVDDYNASIEETCT ELSAQHGLNVQLFPIMRVNAPTGDLIQDIFQKIDRCSIFIADITTNNANVLYEFGYAKGK GKDYILLLNKDKNPTPPKSDYHNELRHEFQGYQNLKAVLKTQIEAVLKERRYF >gi|257257250|gb|ACDX02000005.1| GENE 36 37720 - 39138 683 472 aa, chain - ## HITS:1 COG:SA1625 KEGG:ns NR:ns ## COG: SA1625 COG0732 # Protein_GI_number: 15927381 # Func_class: V Defense mechanisms # Function: Restriction endonuclease S subunits # Organism: Staphylococcus aureus N315 # 48 218 23 189 409 72 30.0 2e-12 MAKFDFKTKLPFGEMFLVKSSEIEGRIDIDFYRPNLTEIEKKILAKSKKRLKDFALSMGS GATPSTTNPEFYSDKNGIPLLRVQNLTLNSTVELNNLKYITEDVHENMLKRSQVTDQDLL VKITGVGRMAVAAVPPKEFSGNVNQHIVVVRTGSREKSLYLANYLNLDVIEKLASRRVTG GTRPALDYPALRSIPIIEDIDFSILENAKKQANQLKQQAKTLLNSINSYLLGELGITLPE TDNSLNSRMFTVQMSEVGVGRLDSFTYQPRFTKLAETLEQCRYAVASLAKVATDIKNGVE IRNYVEEGFRYLRVTDLSEHGLNHSSPKFVDVHGVPEKIRLNPNCLLIARSGSLGLVNVV TEDIKDAILSSHIFKVELDTTQIYPEYLEAFARCPIGQEQFKQLNNGGVIPEINQSALKT FKVALPDKSTQQKIIAHIRAIKAQAATLQAEAEQLLSQAKAEIEQMILGGAQ >gi|257257250|gb|ACDX02000005.1| GENE 37 39125 - 41287 2334 720 aa, chain - ## HITS:1 COG:SP0886 KEGG:ns NR:ns ## COG: SP0886 COG0286 # Protein_GI_number: 15900769 # Func_class: V Defense mechanisms # Function: Type I restriction-modification system methyltransferase subunit # Organism: Streptococcus pneumoniae TIGR4 # 190 638 4 450 497 102 23.0 4e-21 MNQTTDFIKQGIQANLIRLTDADRIEYVFEQRSRNFSNPEEKVQAEAYCRLILQYGYPQK RVRNFVSVTMGSEKKEADIVVYRDDECLMPHILVECKKAEVSEAEFIQAVEQAYSYAFAL PNNVKYVWVTSSIRNEYFSVDKNRNSRSTLPDIPPFGVNKLAPYKYVKGATQNSGAGKQQ FFDLQIVDEADLTRRFKQAHNALWAGGQLNPSEAFDELDKLIFCKIWDERKPRKNGEPYD FQIILTADEGAGSETQQQKNRAQNTQELFKRVTGLYEEGRLKDAEVFKDNIRLTPERVRT IVGYLQDVNLSKTDLDSKGRAFETFMDSFFRGSFGQYFTPRRIVKFIVDVLPISHDHFVL DTSCGSGGFLLHALDKVRREADEYYSEGSADHFRHWHDFAEKKLYGIEINEQISRAAKMN MIIHDDGHTNIITADGLLSDKALQNQSNNLGFKYNHFDFIITNPPFGSTVKQNEQAYLAT YGFGVSDVSWLDTKNSGVQNRESQKTEILFIEQCRNFLKENGYLAIVIPDGILTNSSLQY VRDQIETDFRIIAVVSLPQTAFTATGAGVKSSVLFLRKYPKAESERIRNLKLDIQNTLKN HHNYISQLKNWDSEKKEVLKKATGIEYSGTLADFKKTDAYAEWKAQINSGYSDKINELKE QMIEEYLQEKRRQLPDYPIFMAIAEQIGYDATGKDTPINELDIIAAELACFIERVNNGEI >gi|257257250|gb|ACDX02000005.1| GENE 38 41397 - 42827 1815 476 aa, chain - ## HITS:1 COG:RSc1294 KEGG:ns NR:ns ## COG: RSc1294 COG1538 # Protein_GI_number: 17546013 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Outer membrane protein # Organism: Ralstonia solanacearum # 17 475 18 466 489 162 30.0 2e-39 MFKRFPLFFLCAALFSGCATHPKHTPAAVETAETLGLPASSQPPIAPQWWRALNDAKLDS LIDTALARSPDLAAAQARLRQAQAGADLADSQRGVKIGLGLSGALLHRDGVNEREKPELI SDLEKRLLGDHGTNITYESLQLQGQWSPDVFGKYKHQLEAALGQQRAVEYEIAQTRLLLA QGVATYYRQWQLLLETRQRVAQRAQLNREREQVVRELIRAGQLAPSKLYAVQQGNSRFQA ALSDLDGNIAQVRHALAALTGQPAQALDTFTPNPAANTPAPPVSQLTADLLGKRPDLAAQ REALTARRHLVASAKTEFYPNITIKALAGLSNVEIGNLPHSSSFLAGLLPSVSLPIFTSG TLRANLSRKEAEFDEQAARYNKNVYTALREAADALTQYETAAAAVRDQTEMTALARKNAA AAQSRYRAGLDNKLDWLAAQDETLQNEAQLAQAQAKLFTAWLALNTAFGGGFAADK >gi|257257250|gb|ACDX02000005.1| GENE 39 43060 - 44067 1275 335 aa, chain - ## HITS:1 COG:NMB1539 KEGG:ns NR:ns ## COG: NMB1539 COG3039 # Protein_GI_number: 15677391 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS5 family # Organism: Neisseria meningitidis MC58 # 1 335 1 335 335 626 93.0 1e-179 MSTFFQQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQRTRYLRDHRGRPSYPLLSM FKAVLLGQWHSLSDPELEHSLITRIDFNLFCRFDELSIPDYSTLCRYRNWLAQDDTLSEL LELINRQLAEKNLKLEKASAAVIDATIIQTAGSKQRQAIEVDEEGQVSGQTTPSKDKDAR WTKKNGLYKLGYKQHTRTDEEGYIEKLHITPANTHECNHLSPLLEGIAEGTTVYADKGYD SKENRQHLKEHQLLDGIMRKAHRNRPLTEVQTKRNRYLSKTRYVVEQSFGTLHRKFRYAR AAYFGLCKVSAQSHLKAMCLNLLKAANRLSVPVAA >gi|257257250|gb|ACDX02000005.1| GENE 40 44233 - 44748 953 171 aa, chain - ## HITS:1 COG:NMA1672 KEGG:ns NR:ns ## COG: NMA1672 COG0629 # Protein_GI_number: 15794566 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Neisseria meningitidis Z2491 # 1 171 1 174 174 253 83.0 9e-68 MSLNKVILIGRLGRDPEVRYMPNGEAVCNFSVATSETWNDRNGQRVERTEWHNITMYRRL AEIAGQYLKKGSQVYLEGRIQSRKYQGKDGIERTAYDIIANEMKMLGGRNDNSGGAPYDD GGYSQGGYQQQAPQQQYQAAPQNQEPPAAPRRQAPAAPAAPVEDIDDDIPF >gi|257257250|gb|ACDX02000005.1| GENE 41 44752 - 46134 1676 460 aa, chain - ## HITS:1 COG:NMA1673 KEGG:ns NR:ns ## COG: NMA1673 COG0477 # Protein_GI_number: 15794567 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Neisseria meningitidis Z2491 # 1 460 2 461 461 720 87.0 0 MAKDNRIQMFPHEWRASTTLSGVYALRMLGMFLVLPVLSLYAASLPGAENNKTLVGLAMG IYGLTQALLQLPLGIASDKFGRKKTIYVGLIVFAAGSFLAAAANSLPMLVAARAIQGAGA VSAAVTALLADLTRDGVRTRAMAMIGLSIGLTFSVSLVVAPMIANIIGVPGLFMLTGILT VISIGVVAWMTPDPEVSKLHEDTQAQPSRMGEVLRDRQLLNLDFGIFALHAAQMALFTAL PFAMTQLGLEKIQHWKVYLPSTITGLVIMIPLIIIGETRNKLKQVFILGIACIAAAQIGL LFGMHSIWLITAYLVVYFIGFNVLEASLPSMVSKIAPSDLKGTAMGVYNTMQSVGLFVGG ASGGWLFQQYGFAGVFTFCSVLMLLWLVIAVLAPAPKPVKNLSYPVSPAWQEKHDSLYQA LSQVEGVESITFSADKQTIYIKALQKGFDQEAAENIITGV >gi|257257250|gb|ACDX02000005.1| GENE 42 46265 - 46906 887 213 aa, chain - ## HITS:1 COG:NMA1674 KEGG:ns NR:ns ## COG: NMA1674 COG0741 # Protein_GI_number: 15794568 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Neisseria meningitidis Z2491 # 14 212 9 206 207 323 85.0 1e-88 MTLHMKTENLILTPESPSRRRFLLAGGALLLSPTAALAGAQREETLADDVASVMRSSINN VNPPRLVFADPNEGERWLAAMSSRLARYVPDAAERRRLLVNIQYESSRAGLNTQVILGLI EVESAFRQYAISGVGARGLMQVMPFWKNYIGKPSHNLFDIRTNLRYGCTILRHYNNIEKG NIVRALARFNGSLGSNKYPNAVLGAWRNRWQWG >gi|257257250|gb|ACDX02000005.1| GENE 43 47301 - 48809 2087 502 aa, chain + ## HITS:1 COG:NMB1467 KEGG:ns NR:ns ## COG: NMB1467 COG0248 # Protein_GI_number: 15677321 # Func_class: F Nucleotide transport and metabolism; P Inorganic ion transport and metabolism # Function: Exopolyphosphatase # Organism: Neisseria meningitidis MC58 # 1 500 1 500 502 879 86.0 0 MTTTPTNVLASVDLGSNSFRLQVCENNNGQLKVIDSFKQMVRFAAGLDEHKNLSEESQER ALDCLAKFGERLRGFRPEQVRVVATNTFRVAKNIAQFLPKAEAALGFPIEIIAGREEARL IYTGVVHTLPPNGDKMLVIDIGGGSTEFVIGSDLHPLATESLPLGCVTYSLRFFQNKITA KDFQAAISAARNEIQRISKMMKRTGWDFAIGTSGSAKSIRDLIAVELPQEADITYKGMRH LADRIIEAGSVKKAKFESLKPERVEVFAGGLAVMMAAFEELELTKMTVTEAALRDGVFYD LIGRGLNEDMRDQTTAEFQNRYHVSLNQAKRVAETAQAFMDSLCHAKNVTVQDLAQWQQY LGWAGRLHEIGLDIAHTGYHKHSAYILENADMPGFSRKEQTILAQLVIGHRGDMKKMADI VGSSEMLWYAVLSLRLAALFCRARLPLDLPPQTQLRADETGKGFILRISQNWLEQHPLIA AALDYESAQWQKIDMPFNVQPQ >gi|257257250|gb|ACDX02000005.1| GENE 44 48952 - 49842 1359 296 aa, chain - ## HITS:1 COG:NMB1074 KEGG:ns NR:ns ## COG: NMB1074 COG0548 # Protein_GI_number: 15676958 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate kinase # Organism: Neisseria meningitidis MC58 # 1 293 1 293 298 476 89.0 1e-134 MSESHSISAADKARILAEALPYIRRFSGSVIVIKYGGNAMTEPALKEGFARDVVLLKLVG IHPVIVHGGGPQINEMLEKIGKKGEFVQGMRVTDGETMDIVEMVLGGHVNKEIVSLINLH GGRAVGVTGRDNHFIKAKKLLVDTPEQAGVDIGQVGTVESIDVRLIEGLIERGCIPVVAP IGVGEKGEAFNINADLVAGKLAEELNAEKLLMMTNISGVMDKEGNLLTNLTPSRINELIA DGTLYGGMLPKISSAVEAASNGVKATHIIDGRLPNALLLEIFTDAGIGSMILGESS >gi|257257250|gb|ACDX02000005.1| GENE 45 50151 - 51281 1709 376 aa, chain + ## HITS:1 COG:NMA1274 KEGG:ns NR:ns ## COG: NMA1274 COG2866 # Protein_GI_number: 15794205 # Func_class: E Amino acid transport and metabolism # Function: Predicted carboxypeptidase # Organism: Neisseria meningitidis Z2491 # 1 376 1 376 376 736 92.0 0 MIKISTQFDAGSVVVKDLTDPANIRLELRPDNASDFAQWFYFRLQGAAYQNCVMHFENAA DSAYPEGWEDYQACASYDRQNWFRVPTEYENGVLTINHTPLSNSVYYAYFEPYSHEQHLN LLGDAQGSGLCRIDDLGSTVQGRDINLLTIGNQVESDMKIWIIARQHPGETMAEWFIEGL LDRLLDPQDPTARILLDRATFYIVPNMNPDGSVLGNLRTNAAGANLNREWENPTLEKSPE VFLVREKMLETGVDLFLDIHGDEALPFVFVAGTEGVPNYNPRIAALETQFKTALLSASPD FQDEYGYEKDAPGQANMTLATNWVGNRFDCLAYTLEMPFKDNANLPDDDFGWNGQRSLRL GEAMLSAVLNVVDDLR >gi|257257250|gb|ACDX02000005.1| GENE 46 51394 - 52248 1101 284 aa, chain + ## HITS:1 COG:NMA1273 KEGG:ns NR:ns ## COG: NMA1273 COG0682 # Protein_GI_number: 15794204 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Prolipoprotein diacylglyceryltransferase # Organism: Neisseria meningitidis Z2491 # 1 282 1 282 283 463 84.0 1e-130 MMIHPQFDPIAISIGPVAIRWYALSYIVGFMLFLWLGRRRIKQGNTAFTQEMLDDFLTWG VVGVILGGRLGYVLFYKLSDYLAHPLDIFKVWEGGMSFHGGFLGVVIAMWLFSRKHKIST LKTMDFVAPLVPLGLASGRIGNFINGELWGRITDINAFWAMGFPQARAEDLNAAVRNPLW AEWMQQYHVLPRHPSQLYQFALEGICLFIVVWIFSKKPRPTGQVASLFLGGYGFFRFIAE YARQPDDYLGLLTLGLSMGQWLSVPMIVLGAIGFVWFGKKNRLN >gi|257257250|gb|ACDX02000005.1| GENE 47 52451 - 52597 210 48 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSEENKIKVNDLPEDKKEQSEEVELPVVNNEEKRGGHSEGGCCGACGG >gi|257257250|gb|ACDX02000005.1| GENE 48 52725 - 53321 536 198 aa, chain - ## HITS:1 COG:no KEGG:Fbal_2392 NR:ns ## KEGG: Fbal_2392 # Name: not_defined # Def: LemA family protein # Organism: F.balearica # Pathway: not_defined # 3 191 4 191 196 65 26.0 2e-09 MGIISLIFIAVILGFLLINFKQKLSRCKKDYQESFVALRIALACRHQAVRHVLDASKIYL GREGDDMDKGLLSACGDAEAVLSQASKSFSPESLSRLCNAEAELNKLLRSLQEALEKNLK QRPDEGLKSQLEMLDAAENDVVSARRAYNRSAERYNRILRKSMSGIIAKVLGYHVKASLI KFEDNNGPQMSKHLLARS >gi|257257250|gb|ACDX02000005.1| GENE 49 53527 - 54612 1262 361 aa, chain - ## HITS:1 COG:CAC3027 KEGG:ns NR:ns ## COG: CAC3027 COG1408 # Protein_GI_number: 15896279 # Func_class: R General function prediction only # Function: Predicted phosphohydrolases # Organism: Clostridium acetobutylicum # 118 358 144 388 392 138 30.0 2e-32 MFGTMFLIMIVLLQLFTFGLGRSLQWLFAPVVGKAGRRWLMGVSYFVTNGLLAGLLLELG HFMFRIMAFWMVLLLFVMYAALATFVLFLLLRKFVASRSLSRSLRLFAPLFVFGLIGFGM YNAYTPVVRHQTVVIDKKMDKPLRIGVASDLHLGILFGARQLDKLVDIMNREKVDLILLP GDLMDDNVDAYRKENMQPHLGRLKAPLGVYATLGNHDMFGDSARIRHDLEAAGITVLGNQ VLQHDAFLLVGRNDDLDHDRPSVAQLLENHNTDQPVLLMDHRPTEVEAHATLPIDVQVSG HVHNGQIAPANLIVRTLYRLAYGYEEIGGRHFFVTSGYGFWGIPLRLGSQSEVWVIDVKG K >gi|257257250|gb|ACDX02000005.1| GENE 50 54746 - 55654 1302 302 aa, chain + ## HITS:1 COG:NMA0996 KEGG:ns NR:ns ## COG: NMA0996 COG2837 # Protein_GI_number: 15793953 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted iron-dependent peroxidase # Organism: Neisseria meningitidis Z2491 # 1 302 1 302 302 525 83.0 1e-149 MNHPQTAIIPDHAQAGIFIEADIRDGRYDDIKTACRSSLEALEKLKTRFPEDILGMTIAF GSEAWKAFGHAEEGSEIKPFPVMGNGLAPSTQHDIYIHIQAYRQNAAFALAQSVFAAFGD SISVATEEHGLRLYEDRGLDGFVDGTENPQGDENVRNVAIIPEDRPDAGGSYVLLQKYLH DLKKWDAVPVAEQEASIGRSKEANEEFSKDVRLPDSHLGRVNLKENGVGLKIVRRSLPFG KLSGEHGLMFTAYCHTLHNIEVQLLHMFGDADGKTDLLLKHLSTAVSGAYYYAPSVERLQ NL >gi|257257250|gb|ACDX02000005.1| GENE 51 55753 - 58326 1682 857 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 1 855 1 808 815 652 43 0.0 MRFDKLTAKFQQALAEAQSLALAADSSYLEAGFVLKALLDDQNSGAAALLAHAGVNVPQV KQRLQQHLNSLPKVSGQGGDILPSRELQAVLNLMDKAATKRGDAYIASELFLLALVQQND ATGKILKEAGATEQNINAAIDAVRGGQNVNDANAEDQRDALKKYTLDLTQRARDGKLDPV IGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVL DLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLK PALARGELHCIGATTLDEYRQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIH HGIDITDPAIVAAAELSDRYITDRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRRII QLKMEKMHVAKESDDASKKRLELIDEEIDGLQKEYADLDEIWKAEKAASSSTADIKKQMD DIKVKIEQAKRQGDFARASELEYGELPKLGAQLQAAESNPDGKKQNKLFRTEVGADEVAE IVSRMTGIPVSKMMEGERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPY GSFLFLGPTGVGKTELCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEE GGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTS NIGSQHIQQMGTQDYEAVKEAVMEEVKAYFRPEMINRIDEVVVFHGLNQENIRNIAKIQL KGLEKRLEAQHLHLKVDDAALDLIAKAGFDPVYGARPLKRAIQSEIENPLAKALLEGKYA PDSTIHVKEEGGKLVFA >gi|257257250|gb|ACDX02000005.1| GENE 52 58587 - 59597 1695 336 aa, chain + ## HITS:1 COG:NMA1682 KEGG:ns NR:ns ## COG: NMA1682 COG0180 # Protein_GI_number: 15794575 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Tryptophanyl-tRNA synthetase # Organism: Neisseria meningitidis Z2491 # 1 336 1 336 336 647 95.0 0 MSKKRVLTGVTTTGIPHLGNYVGAIRPAVRAAQNPDTESFLFLADYHGIIKCHEPEMIHQ STQAVAATWLACGLDPERTTFYRQSDIPEVMELNWILTCITAKGLMNRAHAYKAAVQANV ENNQEDPDHGVEMGLYSYPILMTADILMFNANEVPVGRDQIQHVEMARDIAGRFNHRFKE VFTLPEVKIDENVELLVGLDGRKMSKSYGNTIPLWENDKKTQKSVNKIITNMKEPGEPKQ PDESPLFEIYKAFSTSSETAAFTQMLAEGLAWGEAKKLLATKINAELAEPRERYNELTAN PSQIEDILQAGAAKARKEARELLDKVRDAVGIRPLK >gi|257257250|gb|ACDX02000005.1| GENE 53 59675 - 60214 772 179 aa, chain + ## HITS:1 COG:no KEGG:NMB1470 NR:ns ## KEGG: NMB1470 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis # Pathway: not_defined # 3 179 5 181 181 288 79.0 9e-77 MKAFPILLSALLLAACGKSEAPAEPAQNAAEAAPKPVFKVKYIDNTAIAGLDLGQSSEGK TNDDKKQISYPINGLSQQNVIQLIGNHPNDLEVISGKCMETGDKGEPLGWTENGKCHALF AKLVGNIAEDSGKLTSYLLSHAALQPYQAGKSGYAAVQNGRYILEVDSEGMFFFRRRHY >gi|257257250|gb|ACDX02000005.1| GENE 54 60232 - 61236 1218 334 aa, chain + ## HITS:1 COG:CC3180 KEGG:ns NR:ns ## COG: CC3180 COG1816 # Protein_GI_number: 16127410 # Func_class: F Nucleotide transport and metabolism # Function: Adenosine deaminase # Organism: Caulobacter vibrioides # 6 325 14 333 344 405 60.0 1e-113 MSVHALIRALPKAELHVHIEGTFEPKLMFAIAERNGVSIPYADVEAVRRAYDFHNLQSFL DIYYAAAAVLLHEQDFYDLTIAYFARCREDNVVHTEIFFDPQTHTARGVAFETVINGITR ARLEAQEKWGISSRLIMCFLRHLSEESALETLAQAQPFRRHIDGIGLDSGELGNPPSKFE RVFAQARAQGFPAVAHAGEEGPPEYVWEALDLLKVVRIDHGVRSEEDETLMQRLIAEQMP LTVCPLSNLKLKVVSDLSQHNLRRMLERGVLVTVNSDDPAYFGGYLNQNFIELADALGLN ETDIRTLCKNSFKASFLSEEEKAKRYAEIDKVHV >gi|257257250|gb|ACDX02000005.1| GENE 55 61537 - 63060 2226 507 aa, chain + ## HITS:1 COG:NMB1434 KEGG:ns NR:ns ## COG: NMB1434 COG1502 # Protein_GI_number: 15677292 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes # Organism: Neisseria meningitidis MC58 # 21 507 22 508 508 746 75.0 0 MKKIHLILMLPVFLTGCAGLPSLDDRPESHYLDIRSAPRMDALLNTASSKTSGDISNVYL LNDAHEAFVARAALIEAADHTLDLQYYIWHNDISGKLMFNLIHRAAERGVRVRLLLDDNN TNGLDNVLLALDSHPNIEIRLFNPFVRRKWRALGYLTDFPRLNRRMHNKSFTADNRATIL GGRNIGDEYFKVGEDTIFADLDILATGRVVPEVSQDFDRYWASHSSYTATSIIKKGNIEK GFQELGYNDKDKNETLSRYRSNIENSELYKKMQSNSIDWQSVHTRLISDDPAKGLDRDRH KPPIFDRMQDALKTPEKSVYLVSPYFVPTKSGVRALDQLIQAGVDVTVLTNSLQATDVAA VHSGYVKYRKPLLKAGVKLYELQPNHAVPTTKDRGLTGSSATSLHAKTFIVDEKRIFIGS FNLDPRSARLNTEMGVVLESPQIAGEMQRTLVNTTPKYAYQVTLDKYNKLHWYDPTTQKT YSAEPEAKFWKRVTSKILSILPIEGLL >gi|257257250|gb|ACDX02000005.1| GENE 56 63133 - 64263 1383 376 aa, chain - ## HITS:1 COG:NMB1594 KEGG:ns NR:ns ## COG: NMB1594 COG0687 # Protein_GI_number: 15677444 # Func_class: E Amino acid transport and metabolism # Function: Spermidine/putrescine-binding periplasmic protein # Organism: Neisseria meningitidis MC58 # 1 376 1 376 376 663 89.0 0 MTKHLPLIALAAVMLAACGGSDKNTSDKAGQAGNQNVLRIYNWSEYVDPETVADFEKKNG IKVTYDVYDSDETLESKVLTGKSGYDIVGPSNTFVGRQIKAGAYQKIDKSLIPNYKNLNP ELMKLMEGVDPSHEYAVPFYWGTNTFAINTERVKKALGTDKLPDNQWDLVFNPEYTSKLK QCGISYLDSAAEIYPMVLNYMGKNPNSNDTEDIKAATELLKKNRPNIKRFTSSGFIDDLA RGDTCVTIGFGGDLNIARRRAEEAGGKEKIRVMMPKEGVGIWVDSFVIPKDAKNVANAHK YINDFLDPEVAARNGNFVTYAPSSKPARELMEAEFRDDRTIFPSDEDLKNSFIMVPIQPT ILKFMVRQWQGVKAGK >gi|257257250|gb|ACDX02000005.1| GENE 57 64492 - 67113 3862 873 aa, chain + ## HITS:1 COG:NMA1788 KEGG:ns NR:ns ## COG: NMA1788 COG0013 # Protein_GI_number: 15794680 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Alanyl-tRNA synthetase # Organism: Neisseria meningitidis Z2491 # 1 873 1 873 874 1503 86.0 0 MKTSELRQKFLKFFESKGHTIVRSSSLVPHDDPTLLFTNAGMNQFKDVFLGFDKRPYNRA TTAQKCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKRDAIHFAWEFLTSPEWLN LPKEKLLATVYAEDDEAYNIWLNEIGMPAERIVRIGDNKGAKYASDNFWQMGDTGPCGPC SEIFYDHGEEIWGGIPGSPEEDGDRWIEIWNCVFMQFNRDEQGNMNPLPKPSVDTGMGLE RMAAVMQHVHSNYEIDLFQDLLKAVARETGAPFSMDEPSLKVVADHIRSCSFLIADGVMP SNEGRGYVLRRIIRRAVRHGYKLGQKQAFFYKLVPDLVKAMGDAYPELKEKQTQIEEALK NEESRFAQTLETGMALLENALTKGSNKLDGEIIFKLYDTYGFPYDLTADICRERNIDLDE EGFNREMEAQRARARAAQNFKANAQLDYTGADTEFTGYEKRSQETKIIALYKGSEAVDEL QAGEAGVVVLEQTPFYAESGGQVGDVGFIFAGENRFRVEDTQKIKAAVHGQFGSVVSGRL KVGDAVSAEIDNDIRNSIMRNHSVTHLMHKALRDVLGTHVEQKGSLQNAELTRFDISHPQ GISAEEIAEVERRVNAAIIANVPVKVETMSIEDAQKSGAVMLFGEKYGDFVRVITMGDYS IELCGGTHVARTGDIGFFKIISEGGIAAGIRRVEAITGLAALAWAQNQESLVKNIIAEVK AQTEKDVLAKIQANAANAKALEKELAKAKAELAVHAGAKLLDNAKDLGAAKLVAAQIEAD AAALREIVTDLTGKSDNAVILLAAVNDGKVSLCAGVSKALTNKVKAGDLVKFAAEQVGGK GGGRPDLAQAGGTDAAKLPEMLGSVEGWVREKL >gi|257257250|gb|ACDX02000005.1| GENE 58 67186 - 67860 170 224 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261364445|ref|ZP_05977328.1| ## NR: gi|261364445|ref|ZP_05977328.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 224 1 224 224 313 100.0 6e-84 MSKNKNIFNGNIDTNIIGDNNRIEKNVTNISNNNININNNINNGNNSSSNDAGVAIFGFG IAVVLIAVISFIYAIYFPIIFLILKILAIALLFSSLYGLWRDRQHNLISLFSFLSAIISL FHFLPMLYYHFKWLELKPYSVEFDKEFLRMAWDFYQNLPENVKSSLLYNISIAIFFLISF ITYTFAIFKNNKTAHIIGLIFYLIIPYIFYFLIKFKTNTIGWTL >gi|257257250|gb|ACDX02000005.1| GENE 59 68056 - 68292 385 78 aa, chain + ## HITS:1 COG:no KEGG:Vapar_4505 NR:ns ## KEGG: Vapar_4505 # Name: not_defined # Def: ISPpu13, transposase Orf3 # Organism: V.paradoxus # Pathway: not_defined # 1 73 1 73 82 74 47.0 2e-12 MPYNRQKMENALLALIGALEFEDGRFWKGYDFDLLNSLHEQGLISQPWSKAKSAYLTPEG FGKAKALAEEMFGGESDL >gi|257257250|gb|ACDX02000005.1| GENE 60 68497 - 68733 432 78 aa, chain + ## HITS:1 COG:no KEGG:Vapar_4505 NR:ns ## KEGG: Vapar_4505 # Name: not_defined # Def: ISPpu13, transposase Orf3 # Organism: V.paradoxus # Pathway: not_defined # 1 73 1 73 82 77 49.0 1e-13 MSYNRQKMENALLALIGALEFEDGRFWKGYDFDLLNSLHEQGLISQPWGKAKSAYLTPEG LEKAKALAEEMFGGESDL >gi|257257250|gb|ACDX02000005.1| GENE 61 69502 - 70107 571 201 aa, chain + ## HITS:1 COG:MA4347 KEGG:ns NR:ns ## COG: MA4347 COG2226 # Protein_GI_number: 20093135 # Func_class: H Coenzyme transport and metabolism # Function: Methylase involved in ubiquinone/menaquinone biosynthesis # Organism: Methanosarcina acetivorans str.C2A # 37 197 15 179 179 99 33.0 4e-21 MFKTLKSIWQGLTQKGKIFPHQLAFTLLIPLRNWTLSPQQIVQRLHLAPHHHILEVGCGA GYFSPTLAQSVPQGRLVAADIQPEMLAYTEKRLRRRHIDNVDYYLCDGTHFDFPDQSFDR IVLITVLGEVANQAEYLAEFRRLLRPDGLLSVSETAGDPDKPSRAELRDLMRQNGFETAD EYGSERNFTLNFKASSRLPPT >gi|257257250|gb|ACDX02000005.1| GENE 62 70389 - 71396 759 335 aa, chain + ## HITS:1 COG:PA3913 KEGG:ns NR:ns ## COG: PA3913 COG0826 # Protein_GI_number: 15599108 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Pseudomonas aeruginosa # 6 335 2 331 331 415 59.0 1e-116 MPKIPELVCPAGNLPALKTAVDNGADTVYMGLKDATNARNFPGLNFDMKSAQEGVAYAHA RGRNVLMAINTFAQAGQIERWHRAVDTAVQLGADAIIVADPAIMAYAAERHPDLRLHMSV QGSATNYEAINLMKDLFGIRRAVLPRVLTVDQVKHVIDNTDVEIEVFGFGSLCVMVEGRC ILSSYATGESPNMQGVCSPAKAVRWEQLPDRMNVRLNQVLIDQYKPDELAGYPTLCKGRF EVNDETYYALEEPTSLNVLEMLPELIKIGVSAIKIEGRQRSPMYTAQVTKSLRQALDAAA ADPAHFKVNPVWNNALSKVSEGHQTTLGAYSRPWK >gi|257257250|gb|ACDX02000005.1| GENE 63 71410 - 72327 1125 305 aa, chain + ## HITS:1 COG:RSp0969 KEGG:ns NR:ns ## COG: RSp0969 COG0826 # Protein_GI_number: 17549190 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Ralstonia solanacearum # 6 295 5 288 294 263 45.0 4e-70 MNPMKLSLGPVLFFWQKEALLEFYAAMLDAPVDTIYLGEVVCSRRQKMRFADWVSLAEDL AESGKEIILSSQVLLESESDLKRLRKIMGQDKFKVEANDMGAVKLAREHGIPFVAGASLN IYNESTLALFQKLGAYRWITPSELSRDKVAEIIKASDDIETELFAWGKMPLAYSSRCFTA RHYNLNKDGCEFRCLDYEQGMDMNTREGKPFLTINGIQTMSYGCQNLLPHHEDLRQIGVN MLRLSPQMHGMTEIVRIHRDVLDGKTALADALPELERLTTGTLVDGYWHGQPGIEAVKEE YYGVA >gi|257257250|gb|ACDX02000005.1| GENE 64 72314 - 72754 607 146 aa, chain + ## HITS:1 COG:VC0654 KEGG:ns NR:ns ## COG: VC0654 COG3154 # Protein_GI_number: 15640674 # Func_class: I Lipid transport and metabolism # Function: Putative lipid carrier protein # Organism: Vibrio cholerae # 19 146 24 154 175 74 35.0 5e-14 MALPEIVLPAWAGKIGGKLPGKPPRFALVFALNTMLKRGLLPANMSLFDGKKFEIDVLDA GIKVRFTANAEKFIDADFFGTPDLRLAANGIDFMRMMMREEDPDTLFFNRKLQIEGDTEL GLITKNLLDSVDWPFGDWFLKRQLSD >gi|257257250|gb|ACDX02000005.1| GENE 65 72888 - 74600 2751 570 aa, chain - ## HITS:1 COG:NMB1339 KEGG:ns NR:ns ## COG: NMB1339 COG0442 # Protein_GI_number: 15677205 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Prolyl-tRNA synthetase # Organism: Neisseria meningitidis MC58 # 1 568 1 568 570 1100 96.0 0 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDA YCRIFTRLGLEFRPVAADTGSIGGTGSHEFQVLAESGEDVIAYSDTSDYAANIELAPTLP LKGERAAAQAELTKVHTPNVKTIDSLVDFLSIPIEKTLKSIVVEGENEGEIVLLLLRGDH EFNDIKAEKLAGVKSPLNMAAPAAIRAQFGANGGSLGPVGFKGKVYADFATEKGADWVIG ANEDDYHYTGFNFGRDAAEPEFVDLRNVVEGDESPDGQGRLKLARGIEVGHVFQLRDKYT QAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDEKGIIWTKAMAPFEVVIVPMN YKKSDAVREAADKIYAELLAAGADVLLDDRDERAGVLLNDSELLGIPHRIVIGDRALKEG NVEYAERRDNQAQTVGLNEIAGKVLAALKD >gi|257257250|gb|ACDX02000005.1| GENE 66 75050 - 75898 1101 282 aa, chain + ## HITS:1 COG:PA3628 KEGG:ns NR:ns ## COG: PA3628 COG0627 # Protein_GI_number: 15598824 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Pseudomonas aeruginosa # 6 280 5 281 283 263 46.0 3e-70 MSAHELHLLSRAKMFNGHQEQYRCFSETCQTDMTFGIYLPPQVLKGYPAPVLYFLSGLHG DGSELIRQTGIQRFAAQWNIIVVFPDTSPRGSHISDSTDEFIGQGAGFYVDAAEQPWAAH YQMYSHISRELPDWVERHFPATQERSIAGFSMGGHGALSIALKNPGRYAAVSAFAPLCHP TASRGGKQAFAAYLGVKSEAWQAYDSTSLVQTTSRKLPILIDQGGIDPLFPDELQPEAFV NAARANGFNVQYKVRPGYGHDYFFIASFIDSHIEFHAEALGL >gi|257257250|gb|ACDX02000005.1| GENE 67 75982 - 76821 861 279 aa, chain - ## HITS:1 COG:HI1427 KEGG:ns NR:ns ## COG: HI1427 COG5266 # Protein_GI_number: 16273332 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Co2+ transport system, periplasmic component # Organism: Haemophilus influenzae # 1 277 1 278 278 298 52.0 9e-81 MKKLWILGALGLSMAAQAHDLWVSAPVRLDSGSTLKADLGYSHDFPNVEKIADDRVHIFK PLQLTDKSGKTVDLTNKGENYQYVSKSRLKDGSYWVGAVYKPTFWSQNSEGWKQKTLKDL PGATYCEQAQMFGKAFLQVGNAGVDESVLTRPVGHELELIPLKNPNEVKVGGLLPVKVLY KGKPLAKATVMASSDTLAEMDLAATHDHREPQGFSGKTDKDGVVNVIPLIEGLWKIKAVH QADYADKSVCQENKSYATLIMPVGTKRAAERHEHHHHQH >gi|257257250|gb|ACDX02000005.1| GENE 68 77052 - 77873 834 273 aa, chain - ## HITS:1 COG:NMB0619 KEGG:ns NR:ns ## COG: NMB0619 COG1806 # Protein_GI_number: 15676522 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 1 273 1 273 273 500 89.0 1e-141 MTAPRHVFYISDRTGLTAENIGEALLNQFGSVEFKRHTYPFIDTPEKARAVVEKVNRNAE ENGLRPIAFVSVVDDEIREMIKKSNAFHINFFETFLGLLEKELNTEAVAATQGHHSIGNT QRYDARMEAVNFSLNHDDGVSDKNLQEADVILMGVSRSGKTPTCLYLALQYGIRAANYPL IPDDLESTDLPRMVKPYKDKLFGLTIQPERLQAIRNERRPNSNYSKIDTCRSEVADAQNM FKRHGVPFTNTTDKSVEELAVHILQACKLKRRF >gi|257257250|gb|ACDX02000005.1| GENE 69 78292 - 80676 3401 794 aa, chain + ## HITS:1 COG:NMA0826 KEGG:ns NR:ns ## COG: NMA0826 COG0574 # Protein_GI_number: 15793797 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate synthase/pyruvate phosphate dikinase # Organism: Neisseria meningitidis Z2491 # 1 794 1 794 794 1580 97.0 0 MADNYVIWFENLRMTDVESVGGKNASLGEMISQLTEKGVRVPGGFATTADAYRAFLAHNG LSERISAALAQLDVEDVAELARVGKEIRQWILDTPFPEQLDAEIETAWNKMVADAGGADI SVAVRSSATAEDLPDASFAGQQETFLNINGLENVKAAMHHVFASLYNDRAISYRVHKGFE HDIVALSAGVQRMVRSDSGASGVMFTLDTESGFDQVVFVTSSYGLGENVVQGAVNPDEFY VFKPTLKAGKPAILRKTMGSKQIKMIFTDKAEAGKSVMNVDVPEEDRNRFSITDEEITEL AHYALTIEKHYGRPMDIEWGRDGLDGKLYILQARPETVKSQEEGSRNLRRFDINGDKTIL CEGRAIGQKVGQGKVRLVKDASEMDSVEAGDVLVTDMTDPDWEPVMKRASAIVTNRGGRT CHAAIIARELGIPAVVGCGNATELLSNGQEVTVSCAEGDTGFIYSGLLDVQITDVALDNM PKAPVKVMMNVGNPELAFSFANLPSEGIGLARMEFIINRQIGIHPKALLEFDKQDDELKA EITRRIAGYASPVDFYVDKIAEGVATLAASVYPRKTIVRMSDFKSNEYANLVGGSIYEPH EENPMLGFRGAARYVADNFKDCFALECKALKRVRDEMGLTNVEIMIPFVRTLGEAEAVVK ALKENGLERGKNGLRLIMMCELPSNAVLAEQFLQYFDGFSIGSNDMTQLTLGLDRDSGLV SDSFDERNPAVKVMLHLAISACRKQNKYVGICGQGPSDHPDFAKWLVQEGIESVSLNPDT VIETWLYLANELNK >gi|257257250|gb|ACDX02000005.1| GENE 70 80917 - 81600 340 227 aa, chain + ## HITS:1 COG:STM3038 KEGG:ns NR:ns ## COG: STM3038 COG0739 # Protein_GI_number: 16766339 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Salmonella typhimurium LT2 # 17 226 19 244 252 156 43.0 2e-38 MNTIPIFQTTFKRLSPFCLTLFLAACAGSGSPTGAVPDGYYRVKPGDTLSQIAKRHGQSI HTLASWNNLRDTSKIEVGRVLRIRRNTRPISQSNQATQAVAPTNRLNLQWPVENGRNSVI KQYNGTTNKGIDIAGTPGEPVKSAAAGKVLYVGEEVRGYGKLILISHNDYAITAYAHNDA LLVQKDQQVAASQQIATMGSTDTDSVKLHFEVRLNGKAVNPIPYLPN >gi|257257250|gb|ACDX02000005.1| GENE 71 81932 - 83242 1854 436 aa, chain + ## HITS:1 COG:NMA1526 KEGG:ns NR:ns ## COG: NMA1526 COG0544 # Protein_GI_number: 15794420 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) # Organism: Neisseria meningitidis Z2491 # 1 436 2 437 437 741 96.0 0 MSVTVETLENLERKVVLSLPWSEINAETDKKLKQTQRRAKIDGFRPGKAPLKMIAQMYGA SAQNDAINEMVQRRFYDVAVAQELKVAGYPRFEGVEEQDDKESLKIAAIFEVFPEVVIGD LSAQEVEKVTASVGDAEVDQTVEILRKQRTRFNHVEREAQNGDRVIIDFEGKIDGEPFAG GASKNYAFVLGAGQMLPEFEAGVVGMKAGESKDVTVNFPEDYHGQDVAGKSAVFTITLNN VSEPTLPEVDADFAKALGIADGDVAKMREEVKKNVGREVERRVNEQTKESVMNALLKAVE LKAPVALVNEEAARLANEMKQDFVNQGMADAANLDLPLDMFKEQAERRVSLGLILAKLVD ENKLEPTEEQIKAVVANFAESYEDPQEVIDWYYAEPSRLQGPTSLAVESNVVDFVLGKAK VTEKALSFDEVMGAQA >gi|257257250|gb|ACDX02000005.1| GENE 72 83330 - 83950 774 206 aa, chain + ## HITS:1 COG:NMA1525 KEGG:ns NR:ns ## COG: NMA1525 COG0740 # Protein_GI_number: 15794419 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Protease subunit of ATP-dependent Clp proteases # Organism: Neisseria meningitidis Z2491 # 1 205 1 203 204 397 98.0 1e-110 MSFDFNNYLVPTVIEQSGRGERAFDIYSRLLKERIVFLIGPVTDESANLVVAQLLFLESE NPDKDIFFYINSPGGSVTAGMSIYDTMNFIKPNVSTLCLGQAASMGAFLLSAGEKGKRFA LPNSRIMIHQPLISGGLGGQASDIEIHARELLKIKEKLNRLMAKHCGRDLADLERDTDRD NFMSAEEAKEYGLIDQVLENRASLQA >gi|257257250|gb|ACDX02000005.1| GENE 73 84310 - 86535 1573 741 aa, chain - ## HITS:1 COG:NMA0906_1 KEGG:ns NR:ns ## COG: NMA0906_1 COG0658 # Protein_GI_number: 15793872 # Func_class: R General function prediction only # Function: Predicted membrane metal-binding protein # Organism: Neisseria meningitidis Z2491 # 49 487 1 437 440 550 76.0 1e-156 MLKYYGLPFWVVGVIASFALPFVPHWGVWLAAALVLLAASRRFAVAGMMLCVLLGAAYGV FRTEAALSAQWPLNGASESVLTVEVADMPRGDGRRVQFAAKAWTEDGRQFDLLLSDYQKR DWAVGSRWKVSARLKPVIGEVNLRGLNREAWALANGLDGAGTLGKGRSLVREGGGVGLAV WRDAVSRRWQAVGADSPDFSDGIGLMRALSIGEQSALRPELWQAFRPLGLTHLVSISGLH VTMVAVLAGWLVKLIFRRLPWIPAKPRVWILAGGAAGALFYALLAGFSVPTQRSVLMLAA FAWAWWRGSLSSGWTAWWQALAVVLLIDPLAVLGVGTWLSFGLVAALIWASAGRLKERGW RLAVRGQWAATVLSVVLLGYIFASLPIISPLVNAAMIPWFSWVLTPLALLGSVLPFAPLQ WAAAGLAEYTLRGLVWLAEVSPEFAIAAAPVPLLVLAFLAALLWLLPRGLGLRPWACLVL AGFVFYRLDRLDDGLARITVMDAGQGLSVLVQTRDRNLLFDTGTAQAAQTGIVPSLNAMG VRRLDTLILSHHDSDHDGGLDAVSDIEIGETLAGQPEFYPNAKFCAEAQWQWDGVDFEIL RSSEKSGGEDNDKSCVLRVVSDGQALLVTGDLGVKGEADLIERYGSSLYSQVLILGHHGS NTASSGSFLNTVAPKYAVASSGYANAYKHPTPAVQTRVRAHGAALLRTDLSGALVFELDG DEIFKGRLKKDKFYWQKKPFE >gi|257257250|gb|ACDX02000005.1| GENE 74 86685 - 88037 1891 450 aa, chain - ## HITS:1 COG:no KEGG:NMA1449 NR:ns ## KEGG: NMA1449 # Name: not_defined # Def: putative glutamate--cysteine ligase (EC:6.3.2.2) # Organism: N.meningitidis_A # Pathway: Glutathione metabolism [PATH:nma00480]; Metabolic pathways [PATH:nma01100] # 1 449 1 449 449 874 94.0 0 MKLPVMAAEHLSQLQAFEVKILCNHAKIEAWFRSQWNAHRPPFYGSVDIRNAGYKMSSID MNLFPGGFNNLNPNFIPLAAVAAQDAVQRACETAKSVLIIPENHTRNTFYLQNVYALSEI LRSAGYEVRLGSLNPEVTEPTEFETALGDKILLEPLLRTRERVHLADGFSPCVVLLNNDL SAGVPDILKDISQTVLPPLHGGWTTRRKTEHFSAYNQVAAEFAKLIDIDEWQINPYFEKI GGLDFQEREGEDALAEAVERVLAKIQAKYDELGITDQPFVIVKADAGTYGMGVMSVKSAD EVRGLNRKNRNKMAKVKEGLEVSEVIVQEGIYTYETMNGAVCEPVVYMMDRFVIGGFFRV HEGRGADENLNAGGMVFVPLSNSIPTGSGDNSQEAPEACKRVFEQWDSLGMPRSEKDCDV DNEHNRLYVYGVMARLSLLAAALELEQTAP >gi|257257250|gb|ACDX02000005.1| GENE 75 88305 - 89714 2107 469 aa, chain + ## HITS:1 COG:NMA1450 KEGG:ns NR:ns ## COG: NMA1450 COG0065 # Protein_GI_number: 15794355 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase large subunit # Organism: Neisseria meningitidis Z2491 # 1 469 1 469 469 903 95.0 0 MSAQTLYDKLWNSHVVREEEDGTVLLYIDRHLVHEVTSPQAFEGLKMAGRKLWRIDSVVS TADHNTPTGDWDKGIQDPISKLQVDTLDKNIKEFGALAYFPFMDKGQGIVHVMGPEQGAT LPGMTVVCGDSHTSTHGAFGALAHGIGTSEVEHTMATQCITAKKSKSMLIAVEGRLKPGV TAKDVALYIIGQIGTAGGTGYAIEFGGEAIRSLSMEGRMTLCNMAIEAGARSGMVAVDQT TIDYVKDKPFAPKGEAWDKAVEYWRTLVSDEGAVFDKEYRFKAEDIDPQVTWGTSPEMVL DISGKVPNPAEETDPVKRSGMERALEYMGLEAGTPLNEIPVDIVFIGSCTNSRIEDLRDA AAVAKGRKKADNVQRVLIVPGSGLVKRQAEQEGLDKIFIDAGFEWREPGCSMCLAMNTDR LTPGQRCASTSNRNFEGRQGNGGRTHLVSPAMAAAAAVNGKFTDIRTMA >gi|257257250|gb|ACDX02000005.1| GENE 76 89808 - 90032 328 74 aa, chain + ## HITS:1 COG:no KEGG:NMC1178 NR:ns ## KEGG: NMC1178 # Name: not_defined # Def: putative lipoprotein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 2 74 18 101 101 84 65.0 1e-15 MMNKLLITALAALTLSACSSTWSGAKDDTSRNWDKTENAAERGWDKTKAAVKKGGNAVGR GMTHVGEKIEEATE >gi|257257250|gb|ACDX02000005.1| GENE 77 90249 - 90386 103 45 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKFALIALTAMTLLSACNTISGMGKDVSAAGNAVSGSAESVKNY >gi|257257250|gb|ACDX02000005.1| GENE 78 90635 - 91276 1039 213 aa, chain + ## HITS:1 COG:NMA1452 KEGG:ns NR:ns ## COG: NMA1452 COG0066 # Protein_GI_number: 15794357 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase small subunit # Organism: Neisseria meningitidis Z2491 # 1 213 1 213 213 435 97.0 1e-122 MKAFTKITAIVAPLDRSNVDTDAIIPKQFLKSIKRSGFGPNAFDEWRYLDHGEPGMDNSK RPLNPDFSLNQPRYQGAQILLTRKNFGCGSSREHAPWALDDYGFRAVIAPSFADIFFNNC YKNGLLPIVLTEEQVDQLFKEVEANEGYQLSIDLAEQTLTTPSGETFKFDITEHRKHCLL NGLDEIGLTLQHADEIRDFEEKRRQSQPWLFNG >gi|257257250|gb|ACDX02000005.1| GENE 79 91369 - 91830 645 153 aa, chain + ## HITS:1 COG:CAC0836 KEGG:ns NR:ns ## COG: CAC0836 COG2731 # Protein_GI_number: 15894123 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase, beta subunit # Organism: Clostridium acetobutylicum # 1 148 1 151 152 82 31.0 4e-16 MITDTITNAARYAALHPDFADAVRLLQTLDFAALSDGQVPCANPNIRLFIGSEPMRSKAD AKPEAHLKHIDIQVPISGEETYGWIDRGRLKNGLGYNEKRDIEFFDCEPETWLTLQPGEF ALFFPNDAHAPLVGEEKSIRKAVFKIRIETERY >gi|257257250|gb|ACDX02000005.1| GENE 80 92232 - 93302 2042 356 aa, chain + ## HITS:1 COG:NMB1031 KEGG:ns NR:ns ## COG: NMB1031 COG0473 # Protein_GI_number: 15676918 # Func_class: C Energy production and conversion; E Amino acid transport and metabolism # Function: Isocitrate/isopropylmalate dehydrogenase # Organism: Neisseria meningitidis MC58 # 1 356 1 356 356 694 98.0 0 MTKHIAILRGDGIGPEIVAETVRVLDKLIAQGLDASYEYAPLGGEAYDEYGHPYPEFTQN LCRKADAVLLGAVGSPQYDNLDRPLRPERGLLAIRKDLNLFANLRPAILYPELANASTLK PEIVAGLDILIVRELTGDIYFGEPRGIRVLENGEREGYNTMKYSESEIRRIAHVAFQSAQ KRSKKVCSVGKANVLETTELWREIFEEIGKEYPDVELSHMYVDNAAMQLVRAPKQFDVIA TGNIFGDILSDEASMLTGSIGMLPSASLDENGKGLYEPSHGSAPDIAGQNKANPLATILS LAMLLRYSLNDEARAQQVESAVQKVLQQGLRTGDIYEEGTKLVSCSEMGDAVLAAL >gi|257257250|gb|ACDX02000005.1| GENE 81 93773 - 94129 400 118 aa, chain + ## HITS:1 COG:STM4374 KEGG:ns NR:ns ## COG: STM4374 COG3766 # Protein_GI_number: 16767620 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 4 118 17 131 132 82 41.0 2e-16 MLAGVVMTVVFGAVYLRITPAEELRLIKNGNLACALSFGGALVGFCLTLASSIAHSVSFV DFILWGLAAAVIQILVYFAATMMIKGATEELIGNNVAVGALFGAVSVSIGILNAACLT >gi|257257250|gb|ACDX02000005.1| GENE 82 94216 - 95238 1503 340 aa, chain + ## HITS:1 COG:RSp1296 KEGG:ns NR:ns ## COG: RSp1296 COG4260 # Protein_GI_number: 17549515 # Func_class: S Function unknown # Function: Putative virion core protein (lumpy skin disease virus) # Organism: Ralstonia solanacearum # 3 340 5 340 343 350 57.0 2e-96 MFNFIKKQFIDVIQWPNPDDSLLMWRFPIADEEIQNGASLTVREAQMAMFVDEGVTADVF GPGRYTLNTQTLPLLTNLKNWDKLFESPFKSDVYFFNTKQQLARKWGTSQPVTVRDAEFG AVQLRSFGMYAYRISDPAKFFKEVSGVAAEYSGVELETQLRNIAVTQLAAAFGSSGIPFL DMAANQVLLSQKIGELLGAEFAKLGLTLENFTVESITLPAAIQEALDKKISMGVIGDLGR YTQYQTAESIPLAAQNEGGLAGIGAGLGVGAGVGQAMAGAMAGMMQPAAQPAAQPAQNVQ TVSEDPQAKLAKLKSLLDGGLISQEDYDKAKAEVLKQLIG >gi|257257250|gb|ACDX02000005.1| GENE 83 95509 - 97029 1637 506 aa, chain + ## HITS:1 COG:no KEGG:Rpic_4123 NR:ns ## KEGG: Rpic_4123 # Name: not_defined # Def: putative transmembrane protein # Organism: R.pickettii # Pathway: not_defined # 7 499 2 478 481 331 38.0 6e-89 MSNTPFFKTDCPSCGAPVEAHSASAVTLVCGYCNSMLVRQDDGIVDSGRDSALLEDFSPL QIGTTGTFVTQRFTLVGRLQVQYDDGAWNEWYALFDDGRTGWLSEAGDLYVMTMPVETDN PPRFEDIRAGFSELTFQNKHYVASDVRHISLKRAAAQGELPFVLDEDRQNKVADWRCEDL FITLDYSGDTPETFFGRMVNLDDLKLENTRSEDEIKESAGRLKGSIASENCPNCGSSVHW VSGLTSHLNCPSCGSELAISKDKAELITANAMRTAQQSLFTLPVGRQGRLKNREFYVMGA VRYAETDAQETFDNLFNGANRTLTPEGQWSEYLLYNPTQGFLWLVESDDGWSLSQTQNTW PRLDRNRQPQGCGKLYDYGGRVEVAAGAFYWRIRSGDLNYYSDYRDGQNRKLSAELNTHE MAWSKSVPVDYSEIAEAFSLSSRAPHYTAKMAADGIDKSLRIVMTAILVVVNLPALMMDG NSAGPFVIIIGAWLLWTMGKEDGDED >gi|257257250|gb|ACDX02000005.1| GENE 84 97032 - 97178 114 48 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSRATYIIFSTIIIIISMIISYGSSDSDGSRMHSGGYYGGGGFSGGHK >gi|257257250|gb|ACDX02000005.1| GENE 85 97175 - 97567 503 130 aa, chain + ## HITS:1 COG:RSp1293 KEGG:ns NR:ns ## COG: RSp1293 COG1586 # Protein_GI_number: 17549512 # Func_class: E Amino acid transport and metabolism # Function: S-adenosylmethionine decarboxylase # Organism: Ralstonia solanacearum # 6 114 19 136 140 99 50.0 1e-21 MTHIPGNHGLLDLYGCDEAILKDEGRLKTVLKAAAQAAEATVLAERFHTFGGAGGITGVL LLAESHISIHTWPEHRFAAIDAFICGGMKLEKVKEVLCRELAAERAVWTVAQRGEGILDD TQPPVEQQNL >gi|257257250|gb|ACDX02000005.1| GENE 86 97635 - 99245 1613 536 aa, chain + ## HITS:1 COG:no KEGG:AXYL_04397 NR:ns ## KEGG: AXYL_04397 # Name: not_defined # Def: twin-arginine translocation pathway signal 3 # Organism: A.xylosoxidans # Pathway: not_defined # 40 533 37 536 543 417 45.0 1e-115 MPTRRQFLSYTAALAAASSFSWLTYNRLNCKPPVSVNRIGLPLGHLLRDGKLLSPPSRRY ECNTLILGGGAAGLGALWYLAKHGHRDVLLAEGFERNGNNAAYSASDGLQAPSGAHYLAL PSKESAYVREMLADFGILQSDGSFRETDLVYAPESRLLYQDKWQEHLLPKEDADSKRFFD LIGRLKQAYGSDGKKIFAIPIALSSADETWRKLDKLTFKQWLTQEGYTSPELLWYLDYCC RDDYGQGIGQVSAFAGLHYFAARNSAETVLTWPEGLAHLSENLRRHAGLQEGWQWSSENR IRFDKPASVNASAVKIKSLSDDRIEVWLRDNSSGETVALTAQHVISAMPLMVAARIVENP AQYALNIPEYAPWSVANFELHSFPKEKNNSETAWDNVIYGSQGLGYVVATNQLIRVARPE RTIFTTYAALNHDTPQAVRRQLLDATDEALRDLAAKDLIAAYGEGFWQHVSHVDVTVRGH GMSVPKVGYLNDESLLKIRNRASGLLFAHSDLSGYSVFEEALYWGVEAARKVLERG >gi|257257250|gb|ACDX02000005.1| GENE 87 99370 - 99810 535 146 aa, chain + ## HITS:1 COG:NMB1568 KEGG:ns NR:ns ## COG: NMB1568 COG2927 # Protein_GI_number: 15677419 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, chi subunit # Organism: Neisseria meningitidis MC58 # 1 146 1 146 146 200 68.0 6e-52 MPKATFYTHAADPAAFACRLIARAIRDGGQILVWSDFAETIRRLDRDLWQQIPESFIPHE IWQPDQPMSSETLVWLAFGDTLPVVPENTTVLNLSPDFWNEAPVIPARVLEIVGSSLEEL ADARERFSAYKKSGFSIEHHNMIGKA >gi|257257250|gb|ACDX02000005.1| GENE 88 99941 - 100762 1285 273 aa, chain + ## HITS:1 COG:NMB1567 KEGG:ns NR:ns ## COG: NMB1567 COG0545 # Protein_GI_number: 15677418 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerases 1 # Organism: Neisseria meningitidis MC58 # 1 272 1 271 272 322 77.0 7e-88 MNKTFKFSALAIAAALALTACDKKDANTPAAASAPASAASAATDSSSIGTPTQQASYAMG MDIGRSLKQMKDQGAEIDMKVFIEAMQASYEGKENKMTEAQAQEVMMKFLTEQQTKAVEK LQADAKANLEKGEAFLKENATKEGVKTTASGLQYKITKEGEGKQPTKDDIVVVEYEGRLI DGTVFDSSKANGSPATFPVSQVIPGWTEGIQLLKEGGEATFYIPSKLAYRDQAVPGGKIG PNSTLVFDVKLVKIGKPEDFQPAPGQVDIKKVQ >gi|257257250|gb|ACDX02000005.1| GENE 89 100981 - 101607 923 208 aa, chain + ## HITS:1 COG:NMA1755 KEGG:ns NR:ns ## COG: NMA1755 COG0299 # Protein_GI_number: 15794648 # Func_class: F Nucleotide transport and metabolism # Function: Folate-dependent phosphoribosylglycinamide formyltransferase PurN # Organism: Neisseria meningitidis Z2491 # 1 208 1 208 208 348 83.0 4e-96 MKNIVILISGRGSNMQAIVNAAIPDARIAAVLSNSETAAGLAWAAELGIATDSLNHKDFP SRLDFDQAMIEKIDAYQPDLVVLAGFMRILTPEFCTHYQNRLINIHPSILPAFTGLHTHE RALEAGCRVAGCTIHFVTPELDCGPIISQGIVPILDGDTPDDVAARVLTVEHRLFPQAVA DFVAGRLKIEGNRVLNSERNPEGQTLLA >gi|257257250|gb|ACDX02000005.1| GENE 90 101752 - 102450 1088 232 aa, chain + ## HITS:1 COG:no KEGG:NGK_0287 NR:ns ## KEGG: NGK_0287 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 26 232 21 223 223 248 66.0 1e-64 MKPYLRALSLNLTIAAFASPVFISSAHAANLPQSASLQYAGHYNGLTLPATMTFTRNGKG YKVVSTIKVPLYHIRFESGGSISGNTIRPSYYKDVRGGKTYAEAKFRGNQVTYGKTGELQ TETVGGNISDLFTLAWQLAANDAKLPARLSITNGKKIYPVSGMSKIGSGSYTLNGKATPV EKYRVQRGDDTVTYSFATALGNIPAQISYTDDGKTYDLKLTSVSINGKPVKP >gi|257257250|gb|ACDX02000005.1| GENE 91 102513 - 103340 1176 275 aa, chain - ## HITS:1 COG:NMB0924 KEGG:ns NR:ns ## COG: NMB0924 COG4221 # Protein_GI_number: 15676819 # Func_class: R General function prediction only # Function: Short-chain alcohol dehydrogenase of unknown specificity # Organism: Neisseria meningitidis MC58 # 1 275 1 273 273 454 80.0 1e-128 MAILVTGASAGFGEAMCRTFAQAGYFVIGAARRGEKLQALAAELGERFYPLEMDVSRTES IRNALDSLPENFAEIDCLINNAGLALGLETADKADFSDWETMIQTNIVGLTFLTRQILPQ MTERKQGYIMNLGSIAGSYAYEGSNVYGATKAFVRQFSMNLRAELADKNIRVTNIEPGLC GGTEFSNVRFKGDDERAEKVYENVESIQPQDIADTALWLYQRPAHMNVNSIEIMPVAQTF AGMKVIRNALPVPAQAENFEKQSMSLFARIKSWFK >gi|257257250|gb|ACDX02000005.1| GENE 92 103467 - 103925 685 152 aa, chain + ## HITS:1 COG:NMB0923 KEGG:ns NR:ns ## COG: NMB0923 COG3909 # Protein_GI_number: 15676818 # Func_class: C Energy production and conversion # Function: Cytochrome c556 # Organism: Neisseria meningitidis MC58 # 1 151 1 152 152 184 78.0 5e-47 MNTKLFSAALLAALTLSACGGGAPAQPKGPISEDRTTAFKAMMPEFSGMGKMVKGEEPYD VEKFKQAAATFAESSKKPFTFFQSDDKGNGRALPAVWSDAAKFKAEEDKFAAAVEKLNAA AQTGKLEEIKAAYSETGASCKSCHDTFRAPEE >gi|257257250|gb|ACDX02000005.1| GENE 93 104133 - 104351 283 72 aa, chain - ## HITS:1 COG:NMA1685 KEGG:ns NR:ns ## COG: NMA1685 COG1942 # Protein_GI_number: 15794578 # Func_class: R General function prediction only # Function: Uncharacterized protein, 4-oxalocrotonate tautomerase homolog # Organism: Neisseria meningitidis Z2491 # 1 69 1 69 69 99 78.0 1e-21 MPYVNIKVTGGSEAPSAEQKAELIHGVTELLARVLNKNPQTTVVVIDEVDMDNWGIGGES ITVRRAKSQKSG >gi|257257250|gb|ACDX02000005.1| GENE 94 104528 - 105493 1383 321 aa, chain - ## HITS:1 COG:NMA1207 KEGG:ns NR:ns ## COG: NMA1207 COG0042 # Protein_GI_number: 15794151 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-dihydrouridine synthase # Organism: Neisseria meningitidis Z2491 # 2 320 14 332 333 585 85.0 1e-167 MQLILAPMQGLVDDVMRDLLTRIGGYDECVSEFVRITHTVHSRSTWLKYAPEIANGNKTP AGTPCTVQLLGSDADNMAVNALEAVRFGADKIDLNFGCPAPTVNKHKGGAVLLKEPDLIH HIVKTLRQRLPEHIPLTGKMRLGYEDKSLALECAAAIAEGGACALTVHARTKIEGYEPPA HWEWIRKIREHVAIPITANGDVFSLKDYIGIKEMTGCNSVMLGRGAVIRPDLARQIKQYE NGETVRDTDFAEVSTWINQFFHLCLAKEANNKYPVARLKQWLGMMKKEFGEAQELFDEVR AVKDAEEVARILAAFEDKMNA >gi|257257250|gb|ACDX02000005.1| GENE 95 105582 - 106541 1080 319 aa, chain + ## HITS:1 COG:mll3190 KEGG:ns NR:ns ## COG: mll3190 COG1957 # Protein_GI_number: 13472783 # Func_class: F Nucleotide transport and metabolism # Function: Inosine-uridine nucleoside N-ribohydrolase # Organism: Mesorhizobium loti # 3 318 1 313 313 322 52.0 7e-88 MTMNEKIRLIIDTDPGQDDAAAILAAHGLARRGLVDFLGITVVAGNVGMDLTAKNARIIC DWAGEEDFPVYAGAVKPLLRKLETAEAVHGKTGLDGTALHEPRCPLQKQHAVAYLVETLS RAEDASITLCPIGPLTNIALALSIAPEAVRAIKRIVLMGGNYFEAGNMTPAAEFNFFTDP HAAQIVLQSGAPITVLPLDVTHKAQITSERMNRLRRLKNANGSRLADILQSYERFDIQQF GLEGGPLHDPCAVICAVFPELFAGRMCRVDVETQSGLSTGACAVDWHGTTGKTPNALWIT EVDADRMFEELTAAIAELP >gi|257257250|gb|ACDX02000005.1| GENE 96 106590 - 108143 2208 517 aa, chain + ## HITS:1 COG:Cj1135 KEGG:ns NR:ns ## COG: Cj1135 COG0463 # Protein_GI_number: 15792460 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Campylobacter jejuni # 8 505 7 511 515 432 45.0 1e-121 MNPKIPATAAMLVKNSERYLTEVLTALQDFDEVLLLDNGSTDRTFEIAERFTNVSYYKYD FIGFGPMKNLAARLAQNNWIFSIDSDEVADGELIAAIRKAVAENKEQNIFSLSRLNHYNG RLIKACGWYPDIIPRLYHRRFTRFSDRQVHESLILPPDANVRPLEGRLKHYSFENAEGLI QKMQQYSSLYAEENRYKKDSSPFKALLHGSISFVKNYLLKRGFAYGADGLTISIANAQGS YYKYVKLYERNRNISVALIVTTYNRPDALELVLKSALAQTRLPDEIIVADDGSRQDTAEV VEFIRSHTDIPIKHSWRPDDGFRAAESRNRALAQAKSDYIILIDGDMILDPSFIADHLKL ARKGRLIQGSRVILTQARTEEILDSGELPDLSAFSQGIEKRLSALRCRSLSTLIGRQSSR KHKGIKTCNMGFFRSDALAVNGFDNRFVGWGREDSEFVARLFHNGMKRHNLKFAGIAYHL WHHEAERDALPQNDALLKATLSEQKIRCEHGMDEFIK >gi|257257250|gb|ACDX02000005.1| GENE 97 108308 - 109069 1227 253 aa, chain + ## HITS:1 COG:PA2156 KEGG:ns NR:ns ## COG: PA2156 COG3568 # Protein_GI_number: 15597352 # Func_class: R General function prediction only # Function: Metal-dependent hydrolase # Organism: Pseudomonas aeruginosa # 3 250 4 245 245 196 43.0 5e-50 MSPRPITITSYNMHKGMSALNRKVQVDSMAEELRGIGSDVLFLQEVQGQHLMRSNRLPDF PEQPHYDILGDRLSYNRSYGKNAVYPQRHHGNAILSRLPLETRHNLNISVNKLEQRGVLH CEVLPEGWETPLVCLCAHLNLREPDRAKQYRAIFEYVVHHIDPQSPLILAGDFNDWRQKS ALSLGNALNLNEVFVDSNGKRPKTFPARLPVLSLDRVYTRNLEVLDSQIHNGKNWQRLSD HLPLSVKVRPKLP >gi|257257250|gb|ACDX02000005.1| GENE 98 109321 - 110169 986 282 aa, chain + ## HITS:1 COG:NMB0208 KEGG:ns NR:ns ## COG: NMB0208 COG2878 # Protein_GI_number: 15676135 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfB # Organism: Neisseria meningitidis MC58 # 1 279 1 275 279 306 67.0 3e-83 MPTDLQAINRLLPQTQCRECGYQGCLPYAQALLHEDAPVNLCAPGGEAVMVDIAALLGKP RVAPVKIQPKAVALIDEAACIGCTACIRACPVDAIMGASKFMHTVISDECTGCGLCLPPC PVDCIDMIPSEKEYLPAARSLSRSSEARFAAAEHAQSRFDWHTERKARDEAERKAMLAER EAAVKAKQAQIQTETKVAAKPAFNPMDLIAKAMAKAQSQQDKLVASDNREAFKNRQIEEA KERAELRRAQRDVKYGNEEEKAAALAYLRRYKAEQEAAKEIR >gi|257257250|gb|ACDX02000005.1| GENE 99 110514 - 111857 1255 447 aa, chain - ## HITS:1 COG:NMA1565 KEGG:ns NR:ns ## COG: NMA1565 COG1012 # Protein_GI_number: 15794458 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Neisseria meningitidis Z2491 # 1 447 1 447 447 753 82.0 0 MFHSINAYTGETLCRRPAQSYAEFAQELAALKVRQQAFARLGVTGRTALLQAFAERLAQN KERLAEMVCEEVGRCLHECRAELDKSVELIRYYVRLAPELLAHKTIATQASLSQVRFEPL GVVLAVMPWNYPVWQVLRFAIPALCAGNACAVKPAPSVARVSAALLELVSDDLPLIGAWL DNDDTLKAIEDTDAMAFTGSTQTGRLLAAHAGMHLKKTVLELGGSNPFIVMPDADLERAA IEACYSRFRDAGQSCNAAKRIIVTEAIADRFIPLFLAECGKLQTGDPKDPATTLAPLHRE DLRANVHAQVQDAVAHGAEVLAGGFIPEGKGWFYPATVLDKVNPDCRVWNEEVFGPVAMI LRAKDEEHAVALANDTPYGLGASIYTANTRRAWDFAEKIQAGSVFINRHTSSDLRLPFGG VKASGYGRELSEFGLYEFVNVKTYWQK >gi|257257250|gb|ACDX02000005.1| GENE 100 112144 - 112974 967 276 aa, chain - ## HITS:1 COG:NMB0585 KEGG:ns NR:ns ## COG: NMB0585 COG2931 # Protein_GI_number: 15676490 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: RTX toxins and related Ca2+-binding proteins # Organism: Neisseria meningitidis MC58 # 7 251 793 1040 1302 162 45.0 5e-40 MVSDSAYQAAHTDTLRFNGAKFAEAVFTRSGNNLVIKAYGGEDAVTVQGYFDSSSYRYYD FAFDDKTVTAKDMAGMKVEGVGTDGNESLYGWDTADVLDGGKGNDYLSGYNGDDLLKGGE GNDSLYGGEGVDTLEGNAGNDYLSGEKGADILKGGEGNDELHGGEGSDILNGGAGDDRLY GGSSEADTYVFEKGHGKDVVSDYGSLLEHTDTLLFENAVFSDAVFSRLGNDLVVKAYGGD DQVSLQNYFSSKNYQYAQFTFADKTVSAEEAVNGIL >gi|257257250|gb|ACDX02000005.1| GENE 101 112839 - 115601 306 920 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|89068227|ref|ZP_01155637.1| 30S ribosomal protein S2 [Oceanicola granulosus HTCC2516] # 588 869 325 546 620 122 32 1e-26 MARYSEGVGMLMGHLGGQIGTVDSSINAAVSAKSGDGTGTITGTITGIANAATMFPGKAP GVVGGSVVLLTNVAKTGGDLSKLTIGDVLSIGAAAATVVASLTPVGAVVALGLTAAGAGY TFFQLQNPGFNPTMGELFDAWKEKSNRDGKYHIYDPLTLDLDGDGIETVSHNGYKGALFD HDGDGIRTASGWVASDDGLLVVDRNGDGIINDGKELFGDSSVLKDGTKAAHGYAALAEYD SNGDGVVDAKDADFDKLRVWRDLNQDGVSQKEELFTLEEVGVQSLNVAYQDTNQNLGNGN RLAQEGSYTGKDGNVRKMGDLLFGNNTLYSRYSQSVNLTDEQRAAANLQGIGRLRDLREA AALSPALAAALQAYTKAETKAQQKALLDDLVDKWAQTDPNYSVGTRFSAPMLRTANEGVA LTPGQEKAMLMVGSVSDEYKEKLHELRTKIAALDAFSGEKSGVIYVQSKEQMESFLKTVR ETYGKLTDNVYENLLFQTRLQPYLNKIGLKLENGEFKLDFTDVAALFGEVYAHSPEKAFV DLGEFLAYSKISSGDNAFTELSSLMAQYSLDAVNSGTFEQYAEALGKEAMEKLGHKTGTE KDDTLYGNELANFITGGAGDDAISGYGGNDILHGGAGNDTLQGGAGKDTLAGGAGDDRLY GGSSEADTYVFEKGHGKDVVSDSAYQAAHTDTLRFNGAKFAEAVFTRSGNNLVIKAYGGE DAVTVQGYFDSSSYRYYDFAFDDKTVTAKDMAGMKVEGVGTDGNESLYGWDTADVLDGGK GNDYLSGYNGDDLLKGGEGNDSLYGGEGVDTLEGNAGNDYLSGEKGADILKGGEGNDELH GGEGSDILNGGAGDDRLYGGSSEADTYVFEKATARMWFPTALTRQLIPIRCASTAPSLPK PYLPVRATTWSSKPTVVKMP >gi|257257250|gb|ACDX02000005.1| GENE 102 115794 - 116294 277 166 aa, chain + ## HITS:1 COG:no KEGG:Aasi_1471 NR:ns ## KEGG: Aasi_1471 # Name: not_defined # Def: hypothetical protein # Organism: A.asiaticus # Pathway: not_defined # 1 134 13 152 157 100 45.0 2e-20 MKYENLIQRSDREFKRLTGVTPVLFHEMLQITTEAESRKVKSGRPHTLSLADQLLLTLSY LRHYHTQLELAAIYGLSESNVCRTIRKTEDALIRCKRFSLPKHKNPGDHTVLIDVTESPI ERPKNSGSITAARKSGTRLKSRSYTAEKLKKSSASGRGWVLSMICV >gi|257257250|gb|ACDX02000005.1| GENE 103 116267 - 116587 431 106 aa, chain + ## HITS:1 COG:SP1928 KEGG:ns NR:ns ## COG: SP1928 COG3293 # Protein_GI_number: 15901752 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 5 103 24 124 129 80 46.0 6e-16 MGAQHDMRLARRHLTELYPYKIVIADKGYQGLAKTGLQTPKKKSKHHLMNKQDKEANRRL GKLRTVIEHINRKLKIFKILSLPYRNRRKRFGLRANLIAGLINAMG >gi|257257250|gb|ACDX02000005.1| GENE 104 116584 - 117162 478 192 aa, chain + ## HITS:1 COG:mlr5757 KEGG:ns NR:ns ## COG: mlr5757 COG2801 # Protein_GI_number: 13474791 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Mesorhizobium loti # 14 183 69 251 263 101 34.0 7e-22 MNIFARGLLKKQAKRYNKSYPGELVHLDTKRLPLLKGQKATDKRDYLFVAIDDFSRELYA AILPDKTADSAAKFLTEHLIDPCPYLIECVYSDNGTEYKGSANHAFGVACYENGIGQKFT RVARPQTNGKAERVIRTLMKMWHEKQLFDSPEHRRKELCRFVNFYNTVKPHRSLNGNTPF EVLHAYFSQPVV >gi|257257250|gb|ACDX02000005.1| GENE 105 117235 - 117477 98 80 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|288575655|ref|ZP_05977374.2| ## NR: gi|288575655|ref|ZP_05977374.2| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 80 1 80 80 138 100.0 1e-31 MSVYSTISLFIISPPTNPKAIGSNPMEKVSFALARLRPSSDHADGLHIESRLANLTDIAS NPMEENQLRPRSVETELRLC >gi|257257250|gb|ACDX02000005.1| GENE 106 117416 - 117616 90 66 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|325266735|ref|ZP_08133410.1| ## NR: gi|325266735|ref|ZP_08133410.1| hypothetical protein HMPREF9098_1137 [Kingella denitrificans ATCC 33394] hypothetical protein HMPREF9098_1137 [Kingella denitrificans ATCC 33394] # 1 66 1 66 66 111 86.0 2e-23 MAFGLVGGLMIKREMVEYTDMEMYASWRKGRYVCQSNKFILRCVNDQWGLTKPTQEQIRE MYLSTR >gi|257257250|gb|ACDX02000005.1| GENE 107 117692 - 117901 77 69 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|288575656|ref|ZP_05977375.2| ## NR: gi|288575656|ref|ZP_05977375.2| hypothetical protein NEIMUCOT_04649 [Neisseria mucosa ATCC 25996] hypothetical protein NEIMUCOT_04649 [Neisseria mucosa ATCC 25996] # 1 69 8 76 76 121 100.0 2e-26 MEYDTQASLLQAHATEQQRILRSTRSDINAVLAAAQGIKILSIIYYTQPEVFGPALPKHH RYPGLQLQP >gi|257257250|gb|ACDX02000005.1| GENE 108 118364 - 119593 1559 409 aa, chain + ## HITS:1 COG:MT0627 KEGG:ns NR:ns ## COG: MT0627 COG1373 # Protein_GI_number: 15840000 # Func_class: R General function prediction only # Function: Predicted ATPase (AAA+ superfamily) # Organism: Mycobacterium tuberculosis CDC1551 # 9 407 11 406 411 147 25.0 4e-35 MYYPRHLQSVLQKLSTQFPAVLLTGARQVGKSTLLQHIAPEYGYLTLDDPLLLDQAKNEP QLFLLNHTPPLIVDEVQYAPELFPLLKMDIDRRKQNGLYLLSGSQAFELMQNVSESLAGR IAVLKLNGLSWREMRGDDFQAAFEPDEGYLADRKPVSSLPEHENIWQIIHRGDMPRLYEQ PETDWQVYYASYVATYIERDVRQLVNVGSSGDFTRFMIAIAARSGELLNYSSVAQEIGVS VDTVKRWLTVLQTSGIVYLLQPYGNNHLKRAIKTPKVYMLNTGLMAYLTKWLTPETIQNG AKSGQFFETFVVGEIIKSFHNQGQEPPIYFYRDTNQKEIDLLIEHQQMLYPVEIKATANP NKKMAAAFNLLRNTLPANELGIAHGTIINQYPQKIWLAENLVAVPAAYV >gi|257257250|gb|ACDX02000005.1| GENE 109 119617 - 121029 837 470 aa, chain - ## HITS:1 COG:no KEGG:NLA_8810 NR:ns ## KEGG: NLA_8810 # Name: not_defined # Def: hypothetical protein # Organism: N.lactamica # Pathway: not_defined # 85 470 1 386 386 734 92.0 0 MIEQKESEKELVVFDSAHLAAWSARKMRKAAKAEKAAATMTEEWSEQILLNEILRVCLQK AADLLGVYNPDGLAITMNDCITWAVEAAIAKTAEQYQFYDNTFNFIEAPVINGWNNFRFT CRFSNENLKQEMGAALTCWRRMSGYNVSSSVFINFAIVLFLQHAGFVFYDLDGQEIADAF NILAAPESQLGKIEVRLGNRPQVVFSQPAYGGRFFPAVFYPVGLPENPTEEIEEWEDLAL RLPLTLYRVVNMWASACQLEATERLQQYDPAAGIAMQTDERTWDYSFEEAVRMAIDIYIR LEEYAQAKQKPVWGEAWQTVLPGSGLPEALAPKTTSHPEKNIEYVRVIPRIAKAKLAQWR QYSGSDNNKAMMALTTMLQLYGLYVSDTEDDGLPPLQVMSLWQYFRMAKGHELYVLRERD LLHLRDDRMTNPIRILDELFYRYDQDYFIGSTTENEEASAERVVKRKIKR >gi|257257250|gb|ACDX02000005.1| GENE 110 121414 - 121983 271 189 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|288575657|ref|ZP_05977378.2| ## NR: gi|288575657|ref|ZP_05977378.2| hypothetical protein NEIMUCOT_04652 [Neisseria mucosa ATCC 25996] hypothetical protein NEIMUCOT_04652 [Neisseria mucosa ATCC 25996] # 1 189 8 196 196 382 100.0 1e-105 MKRNPLLAVSVCSLLLVACTAADIDNFFIGLGGALSANGGSTASQCAKSDLNIKLGRPSW RYVGRFVGGQAGVDKSYDANSIRIIDNNPNIIAVRMKNQYVVPVNGGLGVKIDRQESIHV YYCKERSYEAVRMKNFYRNRLVSTRNAGTKSDETDLRSPYWGYSNNPSCGARMRYGAITE KMLHILCDS >gi|257257250|gb|ACDX02000005.1| GENE 111 122049 - 122531 428 160 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261364496|ref|ZP_05977379.1| ## NR: gi|261364496|ref|ZP_05977379.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 160 1 160 160 266 100.0 3e-70 MQKILLSTLLLTTALAAQATPQTCAVPLQSMTIEGLKLDEPVSSFQRRFPQARRHASNSQ SGQFDTEPGQLRLSPDVQSVAYINYARGQISAFSLVYDDLETSVAGLARAWTGRYGLPKT GWQRGRQQYVYRCRDYQLTIKQDFGMGRGTMGATLTLQRR >gi|257257250|gb|ACDX02000005.1| GENE 112 122624 - 123463 702 279 aa, chain + ## HITS:1 COG:no KEGG:NLA_8220 NR:ns ## KEGG: NLA_8220 # Name: not_defined # Def: hypothetical protein # Organism: N.lactamica # Pathway: not_defined # 20 279 1 260 260 485 90.0 1e-136 MPANPIPSEHPHDYTLSPCMLTDWTFTRYHTPGKSEYAVVYGTVAQDGAGRFAAGGRIRT SPVTRWAAPLAHTHNSVYCLPEGAGCFCDLPATLQPVIDCLGIDPAEAAVILQNAFMQPA HALPETACFGVPVMRPAGQGDCPVVMERHIAELPFYPFWRDSSIGSAQSLIDGQAAVFLH DWNAFCRRFVRTGRHRCQTGHTGNQAEDGQYSYFGLPIMHTPEQDNAPAISEADIAKLPF YTYWHTACASDVHRLADGTRVVPLADWEAFCQRLVLTGR >gi|257257250|gb|ACDX02000005.1| GENE 113 123577 - 124236 820 219 aa, chain + ## HITS:1 COG:SMb20398 KEGG:ns NR:ns ## COG: SMb20398 COG4186 # Protein_GI_number: 16264132 # Func_class: R General function prediction only # Function: Predicted phosphoesterase or phosphohydrolase # Organism: Sinorhizobium meliloti # 5 170 3 149 164 81 34.0 9e-16 MPQTYFTADWHFSHPNIARYCPQFRLQSDNADELNEYLIDCWNRVVTPQDTVYNLGDVCF AKKPAHIEAVLQRLNGQHHLIYGNHDYLIRQNEAHFLNTRKADGHPLLSSASHYLRLKLP EISNTAILCHYPLYEWDGIHHGLYHLYGHLHDRMAAVKGRALNVGWDMHGRFLTAQDIDG FLRDLPAVQYFDDKQNVIVGNSTEDAAAKVRARLAALNQ >gi|257257250|gb|ACDX02000005.1| GENE 114 124276 - 126039 1282 587 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 [Haemophilus influenzae 7P49H1] # 4 568 3 569 618 498 46 1e-140 MAVEAADGDLLHVVVLLGAAVVAVPLFKRLGLGSILGYLAAGLVIGPFGLKLVTDSHAIL HIAGFGVVMFLFLIGLEMKPSHLWKLRNQIFGLGTLQVTLSSLFLTPIGLAYGFSLVMSF ISAVGFTLTSTAMVMQIMDERHEISTPQGQRIVSILLFEDLLIVPMLAIVAFLAPDNPNA VADAVPLWQKIGVAALSLAALIATGIWLLNPLFKILAKSKAREVMTAAALLVVLGAAYLM ELGGLSMAMGAFLAGVLLSESDFRHQLEADIEPFRGLLLGLFFLAVGMSLDVATVLNNWK VILSATVLMIILKCLAVYGVARFAKASHHTAIHRAVLMSQGGEFAFVLLASAAAQRAINA EVLANMTAIVVFSMIMTPFSVMLFDRCFKEPRAAAAVDDVEEHAGELNGNVLIIGFGRMG QVVSQMPLAYGATISILDNDPDTINVAREYGFKVYYGEATRADVLHACGVEHTDIVAVCV DDGESAVRIVENIHHINPNAKVFVRAWDRRNALALVKAEADFVVRETFYSSMKMGDEIVK ALGASVQELRAVHDKVRDADKERFALEIAGKEFEGRRLLLGNIKKNS >gi|257257250|gb|ACDX02000005.1| GENE 115 126159 - 126980 844 273 aa, chain - ## HITS:1 COG:RSc2214 KEGG:ns NR:ns ## COG: RSc2214 COG0491 # Protein_GI_number: 17546933 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Ralstonia solanacearum # 29 269 97 336 339 229 44.0 5e-60 MFQPYSQRSLDDLNKILNDNFRLREADGGVNTAVIGFLVNTGNNLILLDAGVGGVDIMGK NAGRLVDSLKAAGYRPEQIDLLIPTHMHFDHISGLTRNGKRVFPNATLLLAVQEKGFWLD KNINELPESVRGLATLTREAVAPYAKAGKVRFYQSSEEVVPGMRSRPSPGHTPGHNGIEF TSKGQTMLVWGDLMHNHTLQMLDPEIAIEFDSDPKQARASRQAALKDAATRKIWIAGAHM PFSGIGHIRAESNGSYTWVPVGYTPIEIDGKVQ >gi|257257250|gb|ACDX02000005.1| GENE 116 127002 - 127175 277 57 aa, chain - ## HITS:1 COG:no KEGG:MS2011 NR:ns ## KEGG: MS2011 # Name: gloB # Def: GloB protein # Organism: M.succiniciproducens # Pathway: not_defined # 1 57 1 59 339 75 67.0 6e-13 MKKLNTLFAATLLVAAFSAHAAPAYTPAPNQVKQVKTQAPGYFRQMVGDFEVTALYD >gi|257257250|gb|ACDX02000005.1| GENE 117 127249 - 128214 1459 321 aa, chain - ## HITS:1 COG:RSp0908 KEGG:ns NR:ns ## COG: RSp0908 COG2141 # Protein_GI_number: 17549129 # Func_class: C Energy production and conversion # Function: Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases # Organism: Ralstonia solanacearum # 4 319 1 316 319 231 43.0 1e-60 MTALKLPERLQNHRGFARTFQPGKLTLGLIAPFKGYPDSPVPEMDDFATVIKAADQSGIA TLWVRDVPFYDPSFGDVAQIYDPSVTLGYLAALTQNVALGSAGYVSPLREPVLTAKEAAS VEQISGGRFLLGLASGDRPTEYPAFASDFNNRAERYREAWQIIRRLTQEKFPAFNSEHYG RFSGNLDLVPKPAHGLPMLAIGRARQELEWIARESDAWIWYGIAPEKLGDIVNTLKELGD GETWKPFGVANFVELLEDPNAPAEFYNNIYLRGGAKGIVEFWQKQQADGVAHITVNLKPT RRGALETIQDFAENVMPHFAV >gi|257257250|gb|ACDX02000005.1| GENE 118 128394 - 129293 983 299 aa, chain + ## HITS:1 COG:mlr2579 KEGG:ns NR:ns ## COG: mlr2579 COG0583 # Protein_GI_number: 13472321 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mesorhizobium loti # 1 293 1 294 304 227 42.0 2e-59 MELNNLNDMTAFVASVKSGSFTAAAKQLGLTRSTIGKRIVRLEARLNVRLLQRNTRNLAP TDEGRLFYERCTAVLEELENAEQCLAQRSIEPQGRLKISAPLVLGKTILPPLLADFLHRY PQTSVELSLTDDYADLISDGYDLALRNGNPPQFDSLIARTVGSQQMLTCAAPGYLVQHGT PQSPDDLAHHQCLHFLHGGRVSRWRFQQKGKETTFQGSGRFSADNGEALLELALSAFGIV QLPHYLVQTALDSGSLKSVLNDFQSKPVPVMAVYPSRKQLSPKVRALVDMMGEAWGKAV >gi|257257250|gb|ACDX02000005.1| GENE 119 129290 - 129760 247 156 aa, chain + ## HITS:1 COG:no KEGG:NLA_8450 NR:ns ## KEGG: NLA_8450 # Name: not_defined # Def: transposase # Organism: N.lactamica # Pathway: not_defined # 22 156 87 221 221 247 94.0 1e-64 MRCRRPFQKSCLKNKKGRLKTELPPKSWTHPLQLTRCSFFMSKYTLHFKYQAVLHYLHIR SQQRTADHYGISRTHLRRWIRAYQEGGIGALEHPQSKTMTQHRKNPFIADKPDNEKTQAE LIEELCYMRAKVAYLKELKALSQKRTEKDKAKPSKH >gi|257257250|gb|ACDX02000005.1| GENE 120 129523 - 130560 579 345 aa, chain + ## HITS:1 COG:RSc1436 KEGG:ns NR:ns ## COG: RSc1436 COG2801 # Protein_GI_number: 17546155 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Ralstonia solanacearum # 76 340 1 274 278 213 48.0 4e-55 MDTRLSGRRHRRTRTSPIQNHDPTPQKPLHRRQTRQRKNTGRAYRRVVLYARKGCLPKGV KSPQPKADRKGQSQTVQTLRAQHPLKYLLHIANLPKSSFYYHHQDRPDPDAADKALLVET YKRHKGRYGQRRIAAALDWNRKKVARLMKQMELKALIRAKKAYRHPAMGEISEHLLKRRF TAKKPNEKWLTDVTELKGKDGKLYLSPILDLFNREIIAYAMSRRADSEMVKEMLEKAAPR LTDKGTMLHSDQGVLYRTAGYRELLAQHSMVQSMSRKANCWDNAPMESFFAVLKTECFYR AGELTVDELMKQIDDYMDYYNRERCSLKLKKLSPVAYRTQLVQSA >gi|257257250|gb|ACDX02000005.1| GENE 121 130783 - 131790 1230 335 aa, chain - ## HITS:1 COG:NMB1539 KEGG:ns NR:ns ## COG: NMB1539 COG3039 # Protein_GI_number: 15677391 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS5 family # Organism: Neisseria meningitidis MC58 # 1 335 1 335 335 615 92.0 1e-176 MSTFFRQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQRTRYLRDHRGRPAYPLLSM FKAVLLGQWHSLSDPELEHSLITRIDFNLFCRFDELSIPDYSTLCRYRNWLAQDNTLSEL LELINRQLTEKGLKVEKASAAVIDATIIQTAGSKQRQAIEVDEEGQVSGQTTPGKDSDAR RTKKNGLYKLGYKQHTRTDEEGCIGKLHITPANAHECSHLPPLPEGIAEGTTVYADKGYD SKENRQHLKEHRLLDGIMRKAHRNRPLTEAQTKRNQYLSKTRYVVEQSFGTLHRKFRYAR AAYFGLIKVSAQSHLKAMCLNLLKAANRLNAPVAA >gi|257257250|gb|ACDX02000005.1| GENE 122 132263 - 133699 1336 478 aa, chain + ## HITS:1 COG:NMA1478 KEGG:ns NR:ns ## COG: NMA1478 COG1696 # Protein_GI_number: 15794378 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted membrane protein involved in D-alanine export # Organism: Neisseria meningitidis Z2491 # 1 478 1 478 478 692 75.0 0 MPLLSIEFAVFFIAFLPLYWAFFRMPSVQNVLLLLAGMGWLYHLNPIFAAMIACYSSCVH LLGLLMSSEKENVRKFWLGFGVASALAVLCFFKYFDFFRPFIRQYTGQNEIVDILMPLGL SYYTFQSLAYLVYCCRHPMGDRFAWHELLLHLSFFPTITSGPIIRAAAFKSIDGEQAGAL AQIRTAETRALVRPALAVCLILLGIAKKWWLAGALGEGWVSPVFENPAQFDGWGVLSGVY GYTFQLFFDFSGYSDLVIGMAMLLGFRLPKNFAAPLRAFNIRDFWNRWHISLSTWIRDYI YIPLGGNKHGFVLTQFNLLLAMVLSGVWHGYGWNFLLWGALHGVALILLNCGDKIFGRDG SRRLKILRPLAWFVTFHFVCFTFVVFNTSSLADTQMVFDALLANETGWAAPKQADILLLA AFGLMILLYSYLLRLFDGAVAALEKMPMWLWFIPLTLALVLIIVLAPSGIPGFIYADF >gi|257257250|gb|ACDX02000005.1| GENE 123 133715 - 134791 1133 358 aa, chain + ## HITS:1 COG:NMA1479 KEGG:ns NR:ns ## COG: NMA1479 COG2845 # Protein_GI_number: 15794379 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 345 1 321 327 404 60.0 1e-112 MKRFISLFASLLVCTFGAAWFSQDSINAYWQQTYHQASPLEPLSEYEWWRTGAQLQQNAY AFSDDLKARLAGQPTLAESEPQIAEDDGSSEQNAQLNASEPHEKNRPADGRQPQTAQNGG QPDTHRLPIAPPANIVLGQGDKVFFAGDSMMQGVAPFVERSLKKQYGIQSVNLSKQSTGL SYPKFFDWPNTIEQTLKQQTDIRLLVVFLGPNDPWDFPKGKKYLKFASPEWSEEYLSRVN RILSAAEQHHVQVIWMGIPYMKQAKLNKQMRYLDKLLADEISPKALWIPTDKLLSNGSDT YADSVNINGKIIRYRSKDGIHFSAEGQKLLADKIMEKIVFQTTPEVNGEERTEQLSAR >gi|257257250|gb|ACDX02000005.1| GENE 124 134905 - 136014 1542 369 aa, chain + ## HITS:1 COG:NMA1480 KEGG:ns NR:ns ## COG: NMA1480 COG2755 # Protein_GI_number: 15794380 # Func_class: E Amino acid transport and metabolism # Function: Lysophospholipase L1 and related esterases # Organism: Neisseria meningitidis Z2491 # 7 367 25 389 397 432 60.0 1e-121 MNIKTLSVSLTALCLSAAAPAADMLLENYGSSRPTWLSKLKKLDRSSDGKFRVLQIGDSH TAGDLFTEQLRLRLQQKWGDGGIGWVYPSSVKGQRSAAVRYDGSWQTVSSRSVSDDFPLG GIIAKANGSSVTISAKDGSSGEKQISVFAKPVLPEQTLSFNGREVPAGSSGWQIIRSNSR LPLTLSSSMPWDIGYINIENPGRGITVSALGINGAQLTHWSKWRPSWQDDLAQTRADLVI IAYGTNEAFARDLDITATEQSWRSYIRQIKQSLPDAGILILGAPESLKSTSGSCGTRPAT LSSIQQMQQRVARDEKIMYWSWQNAMGGECSMKSWMNQGLAAKDGVHFSGKGYRQAADRL ADSLIQMAD >gi|257257250|gb|ACDX02000005.1| GENE 125 136362 - 137186 1185 274 aa, chain + ## HITS:1 COG:NMA0997 KEGG:ns NR:ns ## COG: NMA0997 COG0834 # Protein_GI_number: 15793954 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Neisseria meningitidis Z2491 # 1 274 2 275 275 446 92.0 1e-125 MLKKFVLGGMTALLLAACGGEGGSASSSAPAQSAGASGSLIERINNKGTITVGTEGTYAP FTYHDKDGKLTGYDVEVTRAVAEKLGVKVEFKETQWDSMMAGLKAGRFDVVANQVGLTSP ERQATFDKSEPYSWSGAVLVARNDSNIKSIDDIKGVKTAQSLTSNYGEKAKAAGAELVPV DGLAQSLTLIEQKRADATLNDELAVLDYLKKNPNAGVKIVWSAPADEKVGSGLIVNKGND EVVAKFSTAINELKADGTLKKLGEQFFGKDISVK >gi|257257250|gb|ACDX02000005.1| GENE 126 137230 - 137892 816 220 aa, chain + ## HITS:1 COG:NMA0999 KEGG:ns NR:ns ## COG: NMA0999 COG0765 # Protein_GI_number: 15793955 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Neisseria meningitidis Z2491 # 1 220 19 238 238 364 96.0 1e-101 MIVSAFLPMVKAGFMVSLPLAVASFLIGMVIAIAVALVRIMPAGGIVRKILLKLVETYIS IIRGTPLLVQLVIVFYGLPSVGIFIDPIPAAIIGFSLNVGAYASETIRAAILSVPKGQWE AGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQETAN RTYDFLPVYIEAALVYWCFCKVLFLIQARLEKRFDRYVAK >gi|257257250|gb|ACDX02000005.1| GENE 127 137902 - 138669 667 255 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 246 1 242 245 261 52 1e-68 MIKIRNIRKTFGENTILRGIDLDVGKGQVVVILGPSGSGKTTFLRCLNALEMPEDGQIEF DNERPLKIDFSKKTTKHDILALRRKSGMVFQQYNLFPHKTALENVMEGPVAVQGKPAAQA REEALKLLEKVGLGDKVNLYPYQLSGGQQQRVGIARALAIQPELMLFDEPTSALDPELVQ DVLNAMKELAQEGWTMVVVTHEIKFALEVATTVVVMDGGVIVEQGSPKELFEHPKHERTQ KFLRQIRKDSADYRH >gi|257257250|gb|ACDX02000005.1| GENE 128 139018 - 140940 2084 640 aa, chain + ## HITS:1 COG:NMB1226 KEGG:ns NR:ns ## COG: NMB1226 COG0488 # Protein_GI_number: 15677098 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Neisseria meningitidis MC58 # 1 639 1 639 640 1103 94.0 0 MIEIKNLTLQRGLKVLLDKANATVNPGQRVGLIGKNGTGKSSLFALIKGEITQDGGDVSI PKNWRIASVSQETPDLDISALDYVLQGDAELQAFQTTLAQAEAQNDGMKQAEYHAKLEEI DAYTAPARAAKLLNGLGFSQEEHSRPVKSFSGGWRMRLNLAQALICRADLLLLDEPTNHL DLETVLWLENHLASLPCTQIIISHDRDFLNAATTQTIELSQQKLTQYGGNYDFYQTERAQ RLAQQQAAYVKQQAQIKHLQSFIDRFKAKATKAVQAQSRMKALAKLERIAPAHLDSEFSF EFYNPDHLPNPLLKLEHADLGYEGKTVLHNITLSLESGARYGLLGVNGSGKSTFIKALAG KIDLLSGSIIRSEKLNIGYFAQHQLDTIRADQSPVWHIQQLSPEVREQEIRNFLGGFNFV GDMALQKTEPFSGGEKARLALAMIIWQKPNLLLLDEPTNHLDLDMRHALTLALQSFQGAL IVVSHDRSLLEATTDSFLLIDKGRLKNFDGDLNDYRQWRLAQENATAAPAASAQSQNRKD TKRIEAQIRQEKARRGKPIQQKIDKAEKEMAQLSEIQTVCEAFLAQEEAYSDENKTKLQQ TLTQLTEIKVKLTQIEENWLLWQEELEQILTEIDAEFTQI >gi|257257250|gb|ACDX02000005.1| GENE 129 141074 - 141442 219 122 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|255066830|ref|ZP_05318685.1| ## NR: gi|255066830|ref|ZP_05318685.1| nucleolar protein [Neisseria sicca ATCC 29256] nucleolar protein [Neisseria sicca ATCC 29256] # 1 122 1 122 122 131 96.0 2e-29 MRSRIKQGALIVASSLILGLSLHTAAAVFSCHSGNSKTYTSEPSGNCTGADLPKISSHQG GAYRLKINKLSSDSEEKAAKPKKTRSKEKSREKAQEQEAKSKNAKSRAKKSDKAAQTSSE NE >gi|257257250|gb|ACDX02000005.1| GENE 130 141598 - 142149 356 183 aa, chain + ## HITS:1 COG:no KEGG:NGK_1093 NR:ns ## KEGG: NGK_1093 # Name: not_defined # Def: periplasmic protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 1 183 1 170 170 136 52.0 4e-31 MKQSLHTLAASLLMFAAVSGAQASPKIYTCTVNGEVIYTSRPSGNCHSADLPTIGKYSSS RYDAPAFEMSEPAAEAPSKRASNAKPAPKNTAKANPAPAPIRPAPEVAATPAPKSSGSTS RRSILETELSNERKALGEAQKSLAQARVAKGGHVNQQEITSLQSAVLDRQQNIQALQREL GRL >gi|257257250|gb|ACDX02000005.1| GENE 131 142464 - 143237 1150 257 aa, chain - ## HITS:1 COG:NMA1013 KEGG:ns NR:ns ## COG: NMA1013 COG1469 # Protein_GI_number: 15793969 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 1 257 1 257 257 457 88.0 1e-129 MNAIADVQSSRDLRNLPINQVGIKDLRFPITLNTAEGSQSTVARLTMTVFLPADQKGTHM SRFVALMEQQTEALDFDRLHKLTAEMVALLDSHSGKISVSFPFFRKKSAPISGIQSLLDY DVTLTGEIKNGTYSHNLKVMVPVTSLCPCSKEISQYGAHNQRSHVTVSLTANAEVGIEEI IDCVEAQASCQLYGLLKRPDEKYVTEKAYENPKFVEDMVRDVATALIADGRIESFIVESE NFESIHNHSAYAYIAYP >gi|257257250|gb|ACDX02000005.1| GENE 132 143419 - 144576 1655 385 aa, chain + ## HITS:1 COG:NMB0802 KEGG:ns NR:ns ## COG: NMB0802 COG0626 # Protein_GI_number: 15676700 # Func_class: E Amino acid transport and metabolism # Function: Cystathionine beta-lyases/cystathionine gamma-synthases # Organism: Neisseria meningitidis MC58 # 1 385 1 385 385 731 93.0 0 MKFATKVIHSSYDCDEHNRALMPPIYQNSMFALHEIGEQVPYRYSRLSNPTRQVLEDTVA DLERGAAGFAFSSGMAGIDAVWRTFLRPGDTIVAVADIYGGAYDLLVDVYKEWGVNVVFA DLGNPDRLDELLAAHNVKLVWLETPSNPLLRLVDIKALAAKAHAAGALVGIDNTFATPYL QQPLEMGCDIVFHSATKYLCGHSDVLMGIVAVKTKELAKPLHDMMVHTGAIAGPMDCWLV LRGIKTLALRMEVHCKNALDIARRLEAHPAVEKVFYPGLPSHEHYELAKTQMPKGIGGVV TIYLKNDTREAANSVIKNMKLVKMASSLGGVESLVNHCYSQSHSGVPHDVKMEMGIKVGL LRFSIGIEDADDIWNDISKALDTTL >gi|257257250|gb|ACDX02000005.1| GENE 133 144774 - 145232 349 152 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261364518|ref|ZP_05977401.1| ## NR: gi|261364518|ref|ZP_05977401.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 152 1 152 152 297 100.0 1e-79 MKTLIPTLMTAIILTACTSPAEKPQQSEPVTSSEKPSGPRQASTSALAAKWFVVSFDKFT EKDLAGRTAFLDLTKMPKAHGKMGCNHLMLQAKEVGSGKIDFGPIATSMMLCEDMKLEEA FLNMRSVWNYRFDGDDLILEQNGKTMRLRREP >gi|257257250|gb|ACDX02000005.1| GENE 134 145360 - 146139 1022 259 aa, chain + ## HITS:1 COG:NMB1450 KEGG:ns NR:ns ## COG: NMB1450 COG1018 # Protein_GI_number: 15677306 # Func_class: C Energy production and conversion # Function: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 # Organism: Neisseria meningitidis MC58 # 1 259 1 259 259 419 77.0 1e-117 MAASPEAKFTEEKVLWIKHHTPKLMTFAISRPESYRFSAGQFSRLGFRDGEGFIWRAYSV VSAEYADTLEYFAVLIEGGPMSARFAAMKEGDTILLDKTATGFLLPERFPDGKDLVMLST GSGIAPFLSIIEQPEIWQRFDRLVLAHSVSFAGELIFRRRVEALKDHPLIGEYFHKFRFV PITTREETEGALSGKRIPELLKDGSLEAYAGFKFTKADTRFMVCGNPAMVKDTFQALMDL GFAMHRNRIPGEIMMENGF >gi|257257250|gb|ACDX02000005.1| GENE 135 146166 - 147344 687 392 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 [Roseobacter sp. AzwK-3b] # 34 389 20 390 425 269 43 7e-71 MSKRNIFPVDKSLEQPERVMLVGVMLSADYSGANEVRERTFQTTLDEAAELVAAAGGELV LRETAKRDKAHTAYFVGTGKAEELAAAVKLHDIGLAVFNHELTPTQERNLEKILQCRVLD RVGLILAIFAKRAQSQEGKLQVELAQLNHLSGRLVRGYGHLQSQKGGIGLKGPGETQLET DRRLIGQKITALKKQLAQVKKQRATRRKSRMEGRLKTFAIVGYTNAGKSSLFNRLTKADV LAKDQLFATLDTTARRLFLSHEAGVILTDTVGFVRDLPHKLVSAFSATLEETALADVLLH VVDASNPDFERQMDDVNVVLEEIGAHEVPQLVVYNKIDLLPEGVREAGVLRDNSGRAVGV NISVTKSLGLDALREAMIERALENGGKRSSES >gi|257257250|gb|ACDX02000005.1| GENE 136 147403 - 148071 205 222 aa, chain + ## HITS:1 COG:no KEGG:ebA2861 NR:ns ## KEGG: ebA2861 # Name: not_defined # Def: hypothetical protein # Organism: Azoarcus_EbN1 # Pathway: not_defined # 19 222 24 219 226 129 36.0 1e-28 MYHPKHTRKIKVKDNENTPWYKKSWKIIACVFTIIVTLVLNTPTVLKNIRVLPEEVDTTW GDFISWFKEDKEWSGYYSSFPEGIIDIEDMELSDVDMKIILYAKRGKIGGLIYTKKICSS FPSLGFLQFSGDVTLTGKSANEVVVWDVVGGKIREFAKINIERDKDVITIKPISGNVGLF PENARLGKHPDILPDIEEKEEPDEFKFSERCMEQIEKLRPRI >gi|257257250|gb|ACDX02000005.1| GENE 137 148171 - 148296 71 41 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIDRLLPIFAVIGILSSVAYLSLAAWMIYENVMKKRRLLPF >gi|257257250|gb|ACDX02000005.1| GENE 138 148715 - 151186 3145 823 aa, chain + ## HITS:1 COG:NMB1042 KEGG:ns NR:ns ## COG: NMB1042 COG2217 # Protein_GI_number: 15676928 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Neisseria meningitidis MC58 # 5 823 2 813 823 1224 75.0 0 MNQTERTCFHCGLEVPEHLHLTVRYENEDHETCCAGCQAVAQSIIDAGLGNYYKQRTADA EKSELPPPEVLSQLKLYDLPEVQADFVEVGEGDEREAVLMLGGITCAACVWLIEQQLLRT AGVVRVDLNYSTHRCRVVWDEGKIALSDILLKIRKTGYTAAPYDAQKVEAQAQKERKQFI VRLAVAGLGMMQTMMFAVPTYLYGGEIEPLFLEILHWGGFLMVLPVVFYSALPFYRGAWR DWKNRRVGMDTPIAIAVVMTFVAGIYSLAVNAGQGMYFESIAMLLFFLLGGRFMEQIARR RAGDAAERLVKLVPAFCHRLPSYPDSEEIEEAAVVQLQAGDVIVVKPGEVIPVDGTVLSG ESEVDEAMLTGESLPVVKRSSENVTAGTLNTGSPLVIRTDRTGNNTRLSHIVKLLDRALA QKPRAAELAEKYASSFVFGELLLAIPVFIGWTWYADAQTALWITVALLVITCPCALSLAT PTALAASTGALADEGVLISGKQSLETLAQIDDVVFDKTGTLTKGQLSVSRIINLGRLKTE EALAAAQALEYQSEHPIARAILNHTISDDPNPTPEYTVSQRVNRIGQGVSAQMTYKGETQ VWALGRADFVAGIAGVLPDQAADIEHAGSMVFLGNQSGFQAVFLLEDQIKDSAAAMLNIL KQQGIRTHLLSGDRTNAVAQVAQALGLDTYRAEATPENKLAYVEELQKQGRKVLMVGDGI NDAPVLAQADVSAAVAAGADVARDGADLVLLNDDLNILPATIAQARRTREIIRQNLAWAS AYNIIAIPLAVLGYVKPWIAALGMSISSLFVVGNALRLLKKRK >gi|257257250|gb|ACDX02000005.1| GENE 139 151524 - 153551 2710 675 aa, chain - ## HITS:1 COG:HI1706 KEGG:ns NR:ns ## COG: HI1706 COG1292 # Protein_GI_number: 16273593 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Choline-glycine betaine transporter # Organism: Haemophilus influenzae # 7 675 1 669 669 988 72.0 0 MSLFHFLHNRSSFNPFVVSVTLAFVLLVIGIALLVPHQAETVLNAAKAGVFKNFSWFYIL AFSAFFFFLLALSVSSFGNIKLGTNEEEPEFSFWSWIAMLFAAGMGVGLMFFGVAEPLTH YLSPITEGGDGIKQQDALLHTLFHWGVHAWSVYAVIALALAYFAFRYKLPLSLRSCFYPL LKEKTDGKAGDIIDILALVATLFGIITTLGFGATQLGAGLEQLGWIEENTFSMQTVVIFI VMGMAIASAASGIGKGVKILSELNLTFAFALMFFVLATGPTLHLLSAFNDNLGTYLSNLI QLSFKTYSYEQNHTEWFGGWTILYWAWWCSWAPFVGLFIARISRGRTIREFIFGVLAVPS LFCVIWFTIFGDTAIWINDHVAAGALGSLTGTPEKLLFRFLEYLPLPTITGFVSLTVIAL FFITSADSGIYVLNNIASRDKSLTAPRWQAVMWGLLMSAAAIVLLRFGGLPTLQTMTLIV ALPFAMLMLVMCFSLMRGLNADHKYFSTAVTTSSVYWSGDNWQDRLERMLNQTQEQDILK FLKTTALPAMRELGEELSDKYSLSVNIQTHFDREEPAVEFTIHKESLRDFMYGIKTIKRE VSEQLIKDGHLPHIRHNVTYEPYTYFFDGRSGYDVQYMNRRELIADILKQYERYLNLLAD VGQELMSHQQTELAE >gi|257257250|gb|ACDX02000005.1| GENE 140 154035 - 154826 1147 263 aa, chain + ## HITS:1 COG:NMA1576 KEGG:ns NR:ns ## COG: NMA1576 COG0171 # Protein_GI_number: 15794469 # Func_class: H Coenzyme transport and metabolism # Function: NAD synthase # Organism: Neisseria meningitidis Z2491 # 1 262 11 272 273 410 76.0 1e-114 MQTQAVIRHIADWLKNYATTAHAKGFVVGVSGGIDSAVVSAIAARTGLKVLLLEMPIRQK ADQVSRAQEHIRRLEQAFPNVSGISVDLTPTFDTFAADVEVDETEFPAKQLALANARSRL RMLTLYYYGQINGLLVTGTGNKIEDFGVGFFTKYGDGGVDISPIADLTKTQIYQIAAELD IAESIQKAAPTDGLWDTERTDEEQMGASYPELEWAMSVYGTRRPEDFEGRQREVLEIYTR LHKAMQHKVNPIPVCKIPEEMLK >gi|257257250|gb|ACDX02000005.1| GENE 141 154983 - 157007 2671 674 aa, chain + ## HITS:1 COG:NMA1485 KEGG:ns NR:ns ## COG: NMA1485 COG4389 # Protein_GI_number: 15794385 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinase # Organism: Neisseria meningitidis Z2491 # 1 652 4 655 668 1158 87.0 0 MEKITHQNLHPLLSQSLTDTDFVLILNALIKFLRRGGKKQAAERFDLIIATLKQDEALAK NFSGRFYHWLSQVHIYPALIKLGIFSRHSFTREMGIRIYERFSPSYKDFANLREVFLYLF HSENDDRWLQTLSIRQWLSLYDLIRTSVDPTLLQNACRQLVDARLRAIEMLAIWIASEAL EPDLIRIAPRLLEADSPFVALQRETAKLVEHYRNDTSPYDTAHLEVMFDQCSKQIDYLRR KGTGAGSGSSVKVAHLLERLQQTIGRLKLLTDIQTDAGNRNRLTITLMNSLIYAAVEQYS TRHLRRSSIRMLARSITENKSHHGEHYITRNRKEYFKMFYSAAGGGVIIALMALYKIHIG SLGFSPFVTSLLAGLNYGIGFMIIHILHCTVATKQPAMTAASFAEQVDLNEGGKAVDNKL AKLLIDVCRSQSVAVFGNVSIAILLACAISFGYAHLNQQPILDAHTTAYQFKSIDIINHP TLWYAAIAGLWLFCSGIIAGFFDNRADYLNLRQRLPFNPLLRKIMRPKPRRVLAAYIHKH YGSLVGNFIFGMLLGMTGYFGHLLGLPLDIRHVAFSSANLGYAAVSGNVGFGTFMLGICS VLAIGLVNLIVSFTLALFVALRSRGTKIGSVGNLCKSFWQQIKANPLILFFPVTPVQTDK DGGKDTAKEGEDKH Prediction of potential genes in microbial genomes Time: Sat Jul 16 23:48:56 2011 Seq name: gi|257257247|gb|ACDX02000006.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont5.1, whole genome shotgun sequence Length of sequence - 149810 bp Number of predicted genes - 149, with homology - 145 Number of transcription units - 104, operones - 36 average op.length - 2.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 167 - 355 132 ## 2 1 Op 2 . - CDS 270 - 563 139 ## gi|261364528|ref|ZP_05977411.1| putative Holliday junction resolvase - Term 693 - 729 4.4 3 2 Op 1 . - CDS 807 - 1283 188 ## gi|288575679|ref|ZP_05977412.2| conserved hypothetical protein 4 2 Op 2 . - CDS 1376 - 1573 115 ## gi|288575686|ref|ZP_06393889.1| conserved hypothetical protein - Prom 1749 - 1808 2.4 - Term 1774 - 1810 4.4 5 3 Tu 1 . - CDS 1819 - 2094 121 ## gi|288575681|ref|ZP_06393886.1| prenyltransferase/squalene oxidase 6 4 Op 1 . - CDS 2300 - 2491 279 ## gi|261364531|ref|ZP_05977414.1| conserved hypothetical protein 7 4 Op 2 . - CDS 2506 - 3099 147 ## gi|288575682|ref|ZP_05977415.2| hypothetical protein NEIMUCOT_04699 8 4 Op 3 . - CDS 3120 - 3422 135 ## gi|288575683|ref|ZP_05977416.2| conserved hypothetical protein - Term 3445 - 3477 5.0 9 5 Tu 1 . - CDS 3719 - 4054 100 ## gi|261364528|ref|ZP_05977411.1| putative Holliday junction resolvase 10 6 Tu 1 . + CDS 4709 - 4978 90 ## gi|297250698|ref|ZP_06934210.1| putative D site-binding protein + Term 4998 - 5040 2.1 - Term 5147 - 5182 7.1 11 7 Tu 1 . - CDS 5221 - 5418 71 ## 12 8 Tu 1 . - CDS 5640 - 5882 144 ## gi|261364535|ref|ZP_05977418.1| hypothetical cytosolic protein 13 9 Tu 1 . - CDS 6166 - 6480 136 ## gi|261365828|ref|ZP_05978711.1| conserved hypothetical protein + Prom 6804 - 6863 6.7 14 10 Tu 1 . + CDS 6930 - 7148 408 ## COG2841 Uncharacterized protein conserved in bacteria + Term 7164 - 7212 10.1 - Term 7151 - 7199 10.1 15 11 Tu 1 . - CDS 7232 - 8647 2004 ## COG0007 Uroporphyrinogen-III methylase - Prom 8674 - 8733 4.5 + Prom 8638 - 8697 2.6 16 12 Tu 1 . + CDS 8919 - 9833 1390 ## COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes + Term 9852 - 9891 3.7 - Term 10043 - 10085 1.1 17 13 Tu 1 . - CDS 10163 - 10921 1019 ## COG3338 Carbonic anhydrase - Prom 11116 - 11175 7.8 - Term 11320 - 11374 10.1 18 14 Op 1 . - CDS 11397 - 12128 977 ## COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes 19 14 Op 2 . - CDS 12254 - 13312 1219 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair - Prom 13337 - 13396 3.4 20 14 Op 3 . - CDS 13407 - 14252 963 ## COG2961 Protein involved in catabolism of external DNA - Prom 14277 - 14336 3.5 21 15 Op 1 . + CDS 14196 - 14402 80 ## gi|288575693|ref|ZP_06393895.1| putative regulatory protein RecX + Term 14407 - 14455 15.3 22 15 Op 2 . + CDS 14464 - 16224 1369 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member + Term 16238 - 16296 3.1 + Prom 16387 - 16446 4.3 23 16 Tu 1 . + CDS 16472 - 17590 1509 ## gi|261364544|ref|ZP_05977427.1| hypothetical protein NEIMUCOT_04719 + Term 17627 - 17659 3.9 - Term 17653 - 17709 16.6 24 17 Tu 1 . - CDS 17741 - 18142 520 ## COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) - Prom 18166 - 18225 3.9 + Prom 18168 - 18227 5.2 25 18 Tu 1 . + CDS 18361 - 19320 1177 ## COG0825 Acetyl-CoA carboxylase alpha subunit + Term 19335 - 19380 8.9 26 19 Tu 1 . + CDS 19505 - 20755 557 ## COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control + Prom 20759 - 20818 2.9 27 20 Op 1 . + CDS 20839 - 21438 266 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 28 20 Op 2 . + CDS 21443 - 22030 562 ## gi|261364549|ref|ZP_05977432.1| sigma-E factor negative regulatory protein + Term 22062 - 22112 6.8 + Prom 22051 - 22110 3.5 29 21 Tu 1 . + CDS 22209 - 23000 197 ## PROTEIN SUPPORTED gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 + Term 23005 - 23062 4.4 - Term 23061 - 23113 16.5 30 22 Tu 1 . - CDS 23126 - 24298 1512 ## COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases - Prom 24424 - 24483 7.9 31 23 Op 1 13/0.000 + CDS 24656 - 25102 630 ## COG1959 Predicted transcriptional regulator 32 23 Op 2 . + CDS 25132 - 26346 1986 ## COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes + Term 26373 - 26404 4.1 + Prom 26405 - 26464 3.4 33 24 Tu 1 . + CDS 26505 - 26738 179 ## gi|261364554|ref|ZP_05977437.1| conserved hypothetical protein 34 25 Tu 1 . + CDS 26900 - 27028 163 ## 35 26 Tu 1 . + CDS 27097 - 27483 720 ## COG0822 NifU homolog involved in Fe-S cluster formation + Term 27533 - 27579 -0.6 + Prom 27844 - 27903 2.3 36 27 Op 1 . + CDS 27930 - 28175 329 ## D11S_0049 hypothetical protein 37 27 Op 2 . + CDS 28244 - 28564 431 ## COG0316 Uncharacterized conserved protein + Term 28567 - 28625 11.3 38 28 Tu 1 . - CDS 28524 - 28745 174 ## COG3036 Uncharacterized protein conserved in bacteria - Prom 28768 - 28827 5.8 + Prom 28737 - 28796 2.4 39 29 Tu 1 . + CDS 28828 - 29334 704 ## COG1076 DnaJ-domain-containing proteins 1 + Term 29355 - 29411 7.3 + Prom 29571 - 29630 5.1 40 30 Op 1 . + CDS 29692 - 31971 3338 ## COG0209 Ribonucleotide reductase, alpha subunit 41 30 Op 2 . + CDS 32010 - 32933 401 ## COG4823 Abortive infection bacteriophage resistance protein + Term 32945 - 33005 13.2 + Prom 33004 - 33063 3.6 42 31 Op 1 8/0.000 + CDS 33186 - 34340 1402 ## COG0208 Ribonucleotide reductase, beta subunit 43 31 Op 2 . + CDS 34460 - 34762 243 ## COG0633 Ferredoxin + Term 34773 - 34846 5.4 + Prom 34795 - 34854 7.8 44 32 Tu 1 . + CDS 34874 - 35701 555 ## NLA_13230 lipoprotein + Term 35804 - 35862 17.0 - Term 35799 - 35845 12.7 45 33 Tu 1 2/0.171 - CDS 35878 - 37173 1814 ## COG0665 Glycine/D-amino acid oxidases (deaminating) - Term 37248 - 37295 10.3 46 34 Op 1 36/0.000 - CDS 37304 - 38191 1372 ## COG1177 ABC-type spermidine/putrescine transport system, permease component II 47 34 Op 2 30/0.000 - CDS 38191 - 39093 1077 ## COG1176 ABC-type spermidine/putrescine transport system, permease component I 48 34 Op 3 . - CDS 39171 - 40295 1497 ## COG3842 ABC-type spermidine/putrescine transport systems, ATPase components + Prom 40655 - 40714 8.6 49 35 Tu 1 . + CDS 40844 - 41524 785 ## COG2003 DNA repair proteins + Term 41560 - 41600 3.7 50 36 Tu 1 . - CDS 41725 - 42228 713 ## NMO_1341 hypothetical protein - Prom 42252 - 42311 4.5 + Prom 42272 - 42331 6.0 51 37 Tu 1 . + CDS 42356 - 42955 707 ## COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component + Term 42963 - 43012 15.2 - Term 42951 - 43000 15.2 52 38 Tu 1 . - CDS 43016 - 43675 839 ## COG3658 Cytochrome b - Prom 43778 - 43837 3.1 + Prom 43673 - 43732 5.2 53 39 Tu 1 . + CDS 43809 - 44708 418 ## PROTEIN SUPPORTED gi|90022317|ref|YP_528144.1| ribosomal protein S15 + Term 44717 - 44768 7.3 54 40 Tu 1 . + CDS 45041 - 46567 1057 ## COG1178 ABC-type Fe3+ transport system, permease component + Term 46575 - 46613 1.1 55 41 Tu 1 . - CDS 46620 - 47333 877 ## COG4122 Predicted O-methyltransferase - Prom 47433 - 47492 2.6 + Prom 47375 - 47434 3.8 56 42 Tu 1 . + CDS 47468 - 48844 1917 ## COG0773 UDP-N-acetylmuramate-alanine ligase + Term 48870 - 48922 16.5 57 43 Op 1 6/0.000 - CDS 48999 - 50912 1723 ## COG1002 Type II restriction enzyme, methylase subunits 58 43 Op 2 . - CDS 50767 - 51930 1115 ## COG1002 Type II restriction enzyme, methylase subunits - Prom 51966 - 52025 3.6 - Term 51984 - 52023 9.3 59 44 Tu 1 . - CDS 52176 - 54038 2451 ## COG0370 Fe2+ transport system protein B - Prom 54063 - 54122 2.4 + Prom 53973 - 54032 3.4 60 45 Tu 1 . + CDS 54067 - 54351 65 ## 61 46 Tu 1 . - CDS 54211 - 54477 359 ## MS1159 hypothetical protein - Prom 54612 - 54671 5.6 + Prom 54586 - 54645 6.8 62 47 Tu 1 . + CDS 54796 - 55422 248 ## PROTEIN SUPPORTED gi|153833204|ref|ZP_01985871.1| ribosomal protein S15 + Term 55450 - 55516 8.1 - Term 55576 - 55620 6.7 63 48 Tu 1 . - CDS 55628 - 56908 1630 ## KRH_22440 acyltransferase (EC:2.3.1.-) + Prom 57281 - 57340 4.0 64 49 Tu 1 . + CDS 57532 - 58575 1118 ## COG1613 ABC-type sulfate transport system, periplasmic component - Term 58587 - 58650 12.3 65 50 Tu 1 . - CDS 58737 - 59645 826 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Term 60032 - 60067 -0.6 66 51 Tu 1 . - CDS 60119 - 61180 1517 ## COG0502 Biotin synthase and related enzymes - Prom 61373 - 61432 7.2 - Term 61590 - 61632 -0.8 67 52 Op 1 . - CDS 61707 - 62681 1349 ## COG0158 Fructose-1,6-bisphosphatase - Term 62701 - 62735 2.0 68 52 Op 2 . - CDS 62759 - 63127 343 ## gi|288575725|ref|ZP_05977471.2| hypothetical protein NEIMUCOT_04780 - Prom 63269 - 63328 2.5 + Prom 63094 - 63153 3.8 69 53 Tu 1 . + CDS 63303 - 64646 1107 ## COG0617 tRNA nucleotidyltransferase/poly(A) polymerase + Term 64663 - 64711 7.3 - Term 64906 - 64948 9.1 70 54 Op 1 26/0.000 - CDS 64981 - 65895 1327 ## COG0130 Pseudouridine synthase - Term 65936 - 65997 11.6 71 54 Op 2 . - CDS 66005 - 66376 679 ## COG0858 Ribosome-binding factor A - Prom 66438 - 66497 4.5 + Prom 66397 - 66456 3.7 72 55 Tu 1 . + CDS 66495 - 67535 878 ## COG0673 Predicted dehydrogenases and related proteins + Term 67769 - 67807 -0.1 - Term 67755 - 67797 -0.8 73 56 Tu 1 . - CDS 67978 - 69024 1697 ## COG0468 RecA/RadA recombinase - Prom 69091 - 69150 8.4 + Prom 69088 - 69147 6.6 74 57 Tu 1 . + CDS 69288 - 69638 402 ## NLA_8450 transposase + Term 69721 - 69759 -0.1 + Prom 69651 - 69710 3.8 75 58 Tu 1 . + CDS 69947 - 70543 560 ## COG2801 Transposase and inactivated derivatives + Term 70640 - 70679 3.2 - Term 70486 - 70526 7.3 76 59 Op 1 11/0.000 - CDS 70613 - 71425 1319 ## COG1180 Pyruvate-formate lyase-activating enzyme - Prom 71576 - 71635 3.9 - Term 71649 - 71695 3.4 77 59 Op 2 . - CDS 71717 - 74002 2997 ## COG1882 Pyruvate-formate lyase - Prom 74123 - 74182 6.0 - Term 74342 - 74377 5.1 78 60 Op 1 2/0.171 - CDS 74421 - 74894 814 ## COG2193 Bacterioferritin (cytochrome b1) 79 60 Op 2 . - CDS 74919 - 75383 802 ## COG2193 Bacterioferritin (cytochrome b1) - Prom 75519 - 75578 9.1 + Prom 75765 - 75824 4.0 80 61 Tu 1 . + CDS 75862 - 77673 2641 ## COG1217 Predicted membrane GTPase involved in stress response + Term 77697 - 77750 13.4 - Term 77692 - 77729 8.0 81 62 Tu 1 . - CDS 77855 - 78097 198 ## gi|261364601|ref|ZP_05977484.1| conserved hypothetical protein - Prom 78125 - 78184 3.7 82 63 Tu 1 . - CDS 78204 - 78581 345 ## gi|255065233|ref|ZP_05317088.1| conserved hypothetical protein - Prom 78629 - 78688 2.7 83 64 Op 1 13/0.000 - CDS 78738 - 79724 1274 ## COG0320 Lipoate synthase 84 64 Op 2 6/0.000 - CDS 79724 - 80341 891 ## COG0321 Lipoate-protein ligase B 85 64 Op 3 . - CDS 80343 - 80609 466 ## COG2921 Uncharacterized conserved protein - Prom 80760 - 80819 4.5 + Prom 80640 - 80699 2.6 86 65 Op 1 16/0.000 + CDS 80810 - 83272 2953 ## COG0466 ATP-dependent Lon protease, bacterial type + Term 83407 - 83433 -1.0 + Prom 83274 - 83333 4.5 87 65 Op 2 . + CDS 83457 - 83726 346 ## COG0776 Bacterial nucleoid DNA-binding protein + Term 83737 - 83783 8.0 - Term 83731 - 83765 3.2 88 66 Op 1 . - CDS 83815 - 84198 234 ## NMB0794 hypothetical protein 89 66 Op 2 . - CDS 84195 - 84401 257 ## NLA_14350 hypothetical protein 90 66 Op 3 2/0.171 - CDS 84429 - 85007 580 ## COG0193 Peptidyl-tRNA hydrolase - Term 85014 - 85061 11.8 91 67 Op 1 9/0.000 - CDS 85074 - 85349 190 ## COG2914 Uncharacterized protein conserved in bacteria 92 67 Op 2 . - CDS 85342 - 85773 537 ## COG2867 Oligoketide cyclase/lipid transport protein - Prom 85864 - 85923 9.3 + Prom 85754 - 85813 3.8 93 68 Tu 1 . + CDS 86001 - 87410 1208 ## COG0790 FOG: TPR repeat, SEL1 subfamily + Term 87438 - 87503 16.2 - Term 87681 - 87714 0.5 94 69 Tu 1 . - CDS 87750 - 88565 946 ## COG1562 Phytoene/squalene synthetase 95 70 Tu 1 . - CDS 88670 - 89233 757 ## COG3545 Predicted esterase of the alpha/beta hydrolase fold - Prom 89274 - 89333 7.1 + Prom 89369 - 89428 4.1 96 71 Tu 1 . + CDS 89448 - 89810 333 ## COG0239 Integral membrane protein possibly involved in chromosome condensation + Term 89854 - 89922 21.6 - Term 89849 - 89899 15.2 97 72 Op 1 2/0.171 - CDS 89916 - 90635 246 ## PROTEIN SUPPORTED gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 98 72 Op 2 . - CDS 90602 - 91321 615 ## COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases + Prom 91616 - 91675 9.7 99 73 Op 1 . + CDS 91719 - 92201 329 ## COG3467 Predicted flavin-nucleotide-binding protein + Term 92232 - 92270 6.2 + Prom 92247 - 92306 5.8 100 73 Op 2 . + CDS 92371 - 92817 465 ## NMCC_1263 hypothetical protein + Term 92832 - 92892 18.3 - Term 92819 - 92880 17.3 101 74 Tu 1 . - CDS 92901 - 93935 1027 ## PROTEIN SUPPORTED gi|169632702|ref|YP_001706438.1| phosphoribosylaminoimidazole synthetase - Prom 93975 - 94034 4.6 + Prom 94023 - 94082 6.1 102 75 Tu 1 . + CDS 94141 - 95211 1620 ## COG0628 Predicted permease + Term 95216 - 95278 8.4 + Prom 95392 - 95451 2.9 103 76 Tu 1 . + CDS 95477 - 96193 1037 ## COG0005 Purine nucleoside phosphorylase + Term 96278 - 96341 0.5 - Term 96374 - 96427 9.1 104 77 Op 1 9/0.000 - CDS 96441 - 98717 2943 ## COG0620 Methionine synthase II (cobalamin-independent) 105 77 Op 2 . - CDS 98856 - 99734 1386 ## COG0685 5,10-methylenetetrahydrofolate reductase - Prom 99809 - 99868 4.6 - Term 100007 - 100045 9.5 106 78 Tu 1 . - CDS 100077 - 100274 365 ## COG2975 Uncharacterized protein conserved in bacteria + Prom 100484 - 100543 2.8 107 79 Tu 1 . + CDS 100607 - 101215 765 ## NMC1074 hypothetical protein + Term 101237 - 101295 16.4 108 80 Op 1 . - CDS 101351 - 101692 627 ## COG0633 Ferredoxin 109 80 Op 2 . - CDS 101778 - 102140 448 ## SSA_1320 hypothetical protein 110 80 Op 3 . - CDS 102223 - 104085 2927 ## COG0443 Molecular chaperone - Prom 104122 - 104181 5.7 + Prom 104193 - 104252 5.7 111 81 Op 1 1/0.286 + CDS 104282 - 105130 498 ## COG1562 Phytoene/squalene synthetase 112 81 Op 2 3/0.029 + CDS 105127 - 106440 836 ## COG2907 Predicted NAD/FAD-binding protein + Term 106442 - 106489 14.2 + Prom 106466 - 106525 5.0 113 82 Op 1 . + CDS 106557 - 107276 908 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) + Term 107296 - 107342 13.8 + Prom 107282 - 107341 2.6 114 82 Op 2 . + CDS 107473 - 107967 164 ## NMB0488 hypothetical protein + Term 107975 - 108032 11.5 + Prom 107977 - 108036 4.3 115 83 Tu 1 . + CDS 108126 - 108752 323 ## PA2459 hypothetical protein + Term 108854 - 108892 9.5 - Term 108840 - 108882 11.2 116 84 Op 1 . - CDS 108896 - 111070 2939 ## COG1197 Transcription-repair coupling factor (superfamily II helicase) 117 84 Op 2 . - CDS 111198 - 112787 1177 ## COG1197 Transcription-repair coupling factor (superfamily II helicase) - Prom 112850 - 112909 6.5 118 85 Op 1 2/0.171 - CDS 112932 - 113663 919 ## COG0590 Cytosine/adenosine deaminases 119 85 Op 2 . - CDS 113670 - 114611 1185 ## COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase - Prom 114632 - 114691 4.6 120 86 Tu 1 . - CDS 114735 - 116033 1636 ## COG0128 5-enolpyruvylshikimate-3-phosphate synthase - Prom 116061 - 116120 5.5 + Prom 116082 - 116141 6.0 121 87 Tu 1 . + CDS 116263 - 117738 2155 ## COG0147 Anthranilate/para-aminobenzoate synthases component I + Prom 117822 - 117881 4.3 122 88 Tu 1 . + CDS 117964 - 118251 237 ## COG2827 Predicted endonuclease containing a URI domain + Term 118302 - 118342 0.3 + Prom 118272 - 118331 1.5 123 89 Op 1 2/0.171 + CDS 118461 - 119597 1249 ## COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) 124 89 Op 2 . + CDS 119677 - 120159 530 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Term 120188 - 120241 14.0 + Prom 120161 - 120220 3.3 125 90 Tu 1 . + CDS 120254 - 120871 491 ## COG2840 Uncharacterized protein conserved in bacteria + Term 120914 - 120953 0.5 + Prom 121125 - 121184 9.0 126 91 Op 1 13/0.000 + CDS 121253 - 123916 3435 ## COG2609 Pyruvate dehydrogenase complex, dehydrogenase (E1) component + Prom 123922 - 123981 2.4 127 91 Op 2 30/0.000 + CDS 124157 - 125776 2348 ## COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes 128 91 Op 3 . + CDS 125864 - 127681 677 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 + Term 127702 - 127738 8.2 129 92 Op 1 . + CDS 128119 - 128826 924 ## COG0220 Predicted S-adenosylmethionine-dependent methyltransferase 130 92 Op 2 . + CDS 128846 - 129475 837 ## COG0307 Riboflavin synthase alpha chain 131 92 Op 3 . + CDS 129484 - 130350 717 ## COG2607 Predicted ATPase (AAA+ superfamily) + Term 130467 - 130507 9.1 - Term 130455 - 130495 9.9 132 93 Tu 1 . - CDS 130528 - 130899 314 ## COG3678 P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein - Prom 131045 - 131104 6.5 + Prom 131052 - 131111 6.2 133 94 Op 1 . + CDS 131212 - 131895 740 ## COG0036 Pentose-5-phosphate-3-epimerase 134 94 Op 2 . + CDS 131983 - 132303 139 ## NLA_13430 hypothetical protein + Prom 132322 - 132381 4.0 135 95 Op 1 4/0.000 + CDS 132557 - 133708 1115 ## COG3705 ATP phosphoribosyltransferase involved in histidine biosynthesis + Term 133732 - 133783 1.4 136 95 Op 2 . + CDS 133808 - 135112 1722 ## COG0104 Adenylosuccinate synthase + Term 135123 - 135177 17.3 - Term 135220 - 135268 6.4 137 96 Tu 1 . - CDS 135283 - 135633 705 ## COG0251 Putative translation initiation inhibitor, yjgF family + Prom 135618 - 135677 3.4 138 97 Tu 1 . + CDS 135863 - 136345 591 ## COG2606 Uncharacterized conserved protein + Prom 136395 - 136454 6.9 139 98 Tu 1 . + CDS 136520 - 137140 793 ## COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain + Term 137160 - 137207 9.3 + Prom 137171 - 137230 2.4 140 99 Op 1 . + CDS 137301 - 138176 1014 ## NLA_10890 integral membrane protein + Term 138187 - 138227 4.1 141 99 Op 2 . + CDS 138506 - 139903 1920 ## COG1027 Aspartate ammonia-lyase + Term 139922 - 139973 16.1 + Prom 139925 - 139984 4.1 142 100 Tu 1 . + CDS 140161 - 141201 708 ## BF2854 hypothetical protein + Prom 141203 - 141262 5.4 143 101 Op 1 . + CDS 141293 - 144334 3064 ## COG1131 ABC-type multidrug transport system, ATPase component 144 101 Op 2 . + CDS 144414 - 144764 203 ## PROTEIN SUPPORTED gi|157165407|ref|YP_001467497.1| 30S ribosomal protein S8 145 101 Op 3 . + CDS 144803 - 145495 1007 ## COG1794 Aspartate racemase + Prom 145637 - 145696 2.3 146 102 Tu 1 . + CDS 145767 - 146627 700 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily + Term 146690 - 146732 3.0 147 103 Tu 1 . - CDS 146673 - 147710 679 ## COG2801 Transposase and inactivated derivatives - Prom 147795 - 147854 3.8 148 104 Op 1 . - CDS 147975 - 149318 1295 ## NLA_11040 DNA helicase 149 104 Op 2 . - CDS 149333 - 149809 490 ## COG2801 Transposase and inactivated derivatives Predicted protein(s) >gi|257257247|gb|ACDX02000006.1| GENE 1 167 - 355 132 62 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTSHTEFQHTAARRRLACVIFPQTFMQYSFNTQPPEGGWNYENVRKIQGLVSTHSRPKAA GN >gi|257257247|gb|ACDX02000006.1| GENE 2 270 - 563 139 97 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261364528|ref|ZP_05977411.1| ## NR: gi|261364528|ref|ZP_05977411.1| putative Holliday junction resolvase [Neisseria mucosa ATCC 25996] putative Holliday junction resolvase [Neisseria mucosa ATCC 25996] # 1 97 20 116 116 174 100.0 2e-42 MMRPYLKQAFQHTAARRRLAQGDAELGLSHPVSTHSRPKAAGAIAKAMPDMAEFQHTAAR RRLGLNEIIHDLTHRVSTHSRPKAAGMCHFSSNFYAI >gi|257257247|gb|ACDX02000006.1| GENE 3 807 - 1283 188 158 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|288575679|ref|ZP_05977412.2| ## NR: gi|288575679|ref|ZP_05977412.2| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 158 23 180 180 299 100.0 4e-80 MFCFNTQPPEGGWLLLGLGVTLVSYVSTHSRPKAAGHDVFPYPIHCTCFNTQPPEGGWMT ITRVYIVQSRVSTHSRPKAAGFVTVGLPWFCVCFNTQPPEGGWMMFSFSELNKNCFNTQP PEGGWSMIRRMTSDIFQFQHTAARRRLETGCFITLRWM >gi|257257247|gb|ACDX02000006.1| GENE 4 1376 - 1573 115 65 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|288575686|ref|ZP_06393889.1| ## NR: gi|288575686|ref|ZP_06393889.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 6 65 73 130 287 65 56.0 2e-09 MLVELNGFNTQPPEGGWVESGVLMAGTFGFNTQPPEGGWVIGRAFGQHGNELWFQHTAAR RRLVF >gi|257257247|gb|ACDX02000006.1| GENE 5 1819 - 2094 121 91 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|288575681|ref|ZP_06393886.1| ## NR: gi|288575681|ref|ZP_06393886.1| prenyltransferase/squalene oxidase [Neisseria mucosa ATCC 25996] prenyltransferase/squalene oxidase [Neisseria mucosa ATCC 25996] # 1 91 1 91 91 162 100.0 1e-38 MGCFNTQPPEGGWPDDKPKEDDKQKVSTHSRPKAAGCFKLGDVVGYFRFNTQPPEGGWDG YRKSPVSRDCFNTQPPEGGWGLSASPFRTTE >gi|257257247|gb|ACDX02000006.1| GENE 6 2300 - 2491 279 63 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261364531|ref|ZP_05977414.1| ## NR: gi|261364531|ref|ZP_05977414.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 63 1 63 63 105 100.0 1e-21 MRFNTQPPEGGWERERVQQQSWYRFNTQPPEGGWDKAIRETLGAQAFQHTAARRRLVIMM FSQ >gi|257257247|gb|ACDX02000006.1| GENE 7 2506 - 3099 147 197 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|288575682|ref|ZP_05977415.2| ## NR: gi|288575682|ref|ZP_05977415.2| hypothetical protein NEIMUCOT_04699 [Neisseria mucosa ATCC 25996] hypothetical protein NEIMUCOT_04699 [Neisseria mucosa ATCC 25996] # 1 197 5 201 201 338 100.0 2e-91 MIPLFQHTAARRRLAELQFQPTQSIGFNTQPPEGGWRRFFSKPTNGRAFQHTAARRRLEN LATHAAGLRMFQHTAARRRLATQTSKTKKHGCFNTQPPEGGWPNKHHAGRDDIRVSTHSR PKAAGYLLTSKTLFYIRVSTHSRPKAAGRVIFAVGASFLSFNTQPPEGGWACPTTKSEPR HTVSTHSRPKAAGSPRN >gi|257257247|gb|ACDX02000006.1| GENE 8 3120 - 3422 135 100 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|288575683|ref|ZP_05977416.2| ## NR: gi|288575683|ref|ZP_05977416.2| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 100 1 100 100 160 100.0 4e-38 MFQHTAARRRLGRHYMQFIHDEYVSTHSRPKAAGGNGKKSDSSSGVSTHSRPKAAGITVC GSSGIVAVSTHSRPKAAGRKIYPCVLVDDVSTHSRPKAAG >gi|257257247|gb|ACDX02000006.1| GENE 9 3719 - 4054 100 111 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261364528|ref|ZP_05977411.1| ## NR: gi|261364528|ref|ZP_05977411.1| putative Holliday junction resolvase [Neisseria mucosa ATCC 25996] putative Holliday junction resolvase [Neisseria mucosa ATCC 25996] # 13 111 7 105 116 83 55.0 4e-15 MIGIFVTIATTCFNTQPPEGGWPGSAAIQPILLRFQHTAARRRLGRECRPVALLCRVSTH SRPKAAGDVSCNFVITFRFQHTAARRRLESAIDKLKQQMAVSTHSRPKAAG >gi|257257247|gb|ACDX02000006.1| GENE 10 4709 - 4978 90 89 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|297250698|ref|ZP_06934210.1| ## NR: gi|297250698|ref|ZP_06934210.1| putative D site-binding protein [Neisseria polysaccharea ATCC 43768] putative D site-binding protein [Neisseria polysaccharea ATCC 43768] # 4 87 3 84 85 73 57.0 5e-12 MLIQPPSGGCVLKLLSDGALAVRTAQPPSGGCVLKQQMKEWLQEHEAQPPSGGCVLKLYG YPLTLTHPKPAAFGRLCVETCVKWQTRPT >gi|257257247|gb|ACDX02000006.1| GENE 11 5221 - 5418 71 65 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAFQHTAARRRLGLRNYQQRGVPMFQHTAARRRLAAAPINDTKNIGSFNTQPPEGGWASA LASPP >gi|257257247|gb|ACDX02000006.1| GENE 12 5640 - 5882 144 80 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261364535|ref|ZP_05977418.1| ## NR: gi|261364535|ref|ZP_05977418.1| hypothetical cytosolic protein [Neisseria mucosa ATCC 25996] hypothetical cytosolic protein [Neisseria mucosa ATCC 25996] # 1 80 134 213 213 162 100.0 6e-39 MCFNTQPPEGGWAWEKLDKHKLDMVSTHSRPKAAGPASAYSPNRHCGFQHTAARRRLGGY GFRLTTFYGFNTQPPEGGWF >gi|257257247|gb|ACDX02000006.1| GENE 13 6166 - 6480 136 104 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261365828|ref|ZP_05978711.1| ## NR: gi|261365828|ref|ZP_05978711.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 78 1 101 163 75 51.0 2e-12 MFQHTAARRRLGRGFGACGSGKMFQHTAARRRLVCREILKLLKEVVSTHSRPKAAGFGRE GFDKLHDVSTHSRPKAAGFTLRPNSRCCLCFNTQPPEGGWSPSL >gi|257257247|gb|ACDX02000006.1| GENE 14 6930 - 7148 408 72 aa, chain + ## HITS:1 COG:NMA1258 KEGG:ns NR:ns ## COG: NMA1258 COG2841 # Protein_GI_number: 15794191 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 72 1 72 72 95 88.0 2e-20 MFPEYRDLISKLKQEDAHFARLFDEHNELDDKITGLVNNPVTSGSEEIEELKKAKLKLKD ELYALLQKASGK >gi|257257247|gb|ACDX02000006.1| GENE 15 7232 - 8647 2004 471 aa, chain - ## HITS:1 COG:NMB1156_2 KEGG:ns NR:ns ## COG: NMB1156_2 COG0007 # Protein_GI_number: 15677032 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III methylase # Organism: Neisseria meningitidis MC58 # 215 457 8 250 274 311 67.0 3e-84 MNHYPLFADLNGRPVLLAGAGKVAERKAESLLQAGAAVRVVARELNPVFQKWADEGKIEW LGSEFHEDDLDDVFFAVAATDDYAFNRRIFQAAEQRAKLCNTVDTADLCSFTVPAVIDRS PLKIAVSSGATAPVLARKWRQIIETLIPLHTGQMAALAGKWRNAVKAKIKGTANRRRFWE NLFDSRFNALAAQGNLDAAEAELAAQLEGFGAAKGEVVLVGAGPGDAGLLTLHALQAIQA ADVVFHDALVSDDVLSMVRKDADKISVGKRAGSHHVQQEETNHLLVEYARQGLRVVRLKG GDPFVFGRGGEEAQVLRQANIPYRIIPGITAALGATAYAGIPLTHRDCAQSALFVTGHSK HDGHQPDWRTLALSNQTLVVYMGTLKAAETAEKLMAHGRSGDTPVAIVSNGTLPHQSVVT GRLKNLSELAENVPRPALIVIGEVVSLRDELKWFQENPAQSRLHTMHEQAA >gi|257257247|gb|ACDX02000006.1| GENE 16 8919 - 9833 1390 304 aa, chain + ## HITS:1 COG:RSc2422 KEGG:ns NR:ns ## COG: RSc2422 COG0175 # Protein_GI_number: 17547141 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes # Organism: Ralstonia solanacearum # 3 304 15 316 316 492 79.0 1e-139 MSIQNHHLDWLEAESVYIIREVVAEAKNPALLFSGGKDSVVLLALAVKAFKLEGRPLKLP FKLLHVDTGHNYPEVIQFRDETVARTGVQLVVGSVEDSIKKGTVVLRRETDSRNAAQAVT LVETIEEQGFDALMGGARRDEEKARAKERIFSFRDEFGQWDPKSQRPELWSLYNTRLFSG ENMRVFPISNWTELDIWQYIARENLALPPIYYSHKREVVERGGLLVPVTPLTPKREGEVS QIRDVRFRTVGDISCTCPVASTAATPEDIIAETAAATISERSATRMDDRVSEAAMEERKK AGYF >gi|257257247|gb|ACDX02000006.1| GENE 17 10163 - 10921 1019 252 aa, chain - ## HITS:1 COG:PM1905 KEGG:ns NR:ns ## COG: PM1905 COG3338 # Protein_GI_number: 15603770 # Func_class: P Inorganic ion transport and metabolism # Function: Carbonic anhydrase # Organism: Pasteurella multocida # 29 252 28 252 252 297 60.0 2e-80 MPCLNLTLPRLTVFLLSTFTAFSAAAHGSHTHWGYTGHDSPESWGELSEEFRLCSTGKNQ SPVNITETVSGRLPAIKVNYKPSAVDVENNGHTIQVNYPEGGNTLSVNGRSYTLKQFHFH VPSENQIKGRTFPMEAHFVHLDENRQPLVLAVLYEPGKTNDRLAPIWNVMPMKEGKVNLD KAFDAGTLLPKRLKYYRFAGSLTTPPCSEGVSWLLLKTYDHIDQAQAEKFTRAIGSHNNR PVQPLNARVVIE >gi|257257247|gb|ACDX02000006.1| GENE 18 11397 - 12128 977 243 aa, chain - ## HITS:1 COG:NMB1155 KEGG:ns NR:ns ## COG: NMB1155 COG0175 # Protein_GI_number: 15677031 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes # Organism: Neisseria meningitidis MC58 # 2 243 4 246 246 273 57.0 2e-73 MSLFRPQLWRIPTTGEAEQRRLPELTATLETRLKHIARRYPQAVFASSLAVEDMIVTDAI CRLKLPLRIITLDTGKLNPETVALITAVNVRYQTELEVFHPDPESARQFEQEFGATAMYD SVELRRRCCHIRKIEPLNRALKNAPAWLTGQRRSQSATRSELDFEETDRSRNIAKFNPIF DWEESDVWAYAQAYDVPLNALYFQGYPSIGCEPCTRPVKADEDIRAGRWWWESKDSKECG LHK >gi|257257247|gb|ACDX02000006.1| GENE 19 12254 - 13312 1219 352 aa, chain - ## HITS:1 COG:NMA1661 KEGG:ns NR:ns ## COG: NMA1661 COG0389 # Protein_GI_number: 15794555 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Neisseria meningitidis Z2491 # 1 351 1 351 352 662 93.0 0 MSQRKIIHIDMDAFYASVELREQPHLKGLPVVVAWEGARSVICAASYEARQFGLHSAMSV ATAKRLCPQAVYVPPHFDLYRQVSAQIHAVFRRYTDLIEPLSLDEAYLDVTHNFKNIPYA SEVATEIRAAIFAEIGLTASAGIAPNKFLAKIASDWRKPNGQFVLPPHKIMAFLETLPLG KIPGVGKVTLKKMQSLGMQTAGDLRRFERGELLNHFGRYGYRLYDLARGTDERPVKAERE RLQISTEITLPEDLSLEQAGGHLPHLAEDLWRQITRKNVEAKGVTLKLKTHDFRIITRSL TYSSVLPDIDALLCAAQTLMQRVPPQHEDAFRLIGIGVNHLVPKDQQQSLWL >gi|257257247|gb|ACDX02000006.1| GENE 20 13407 - 14252 963 281 aa, chain - ## HITS:1 COG:NMB1061 KEGG:ns NR:ns ## COG: NMB1061 COG2961 # Protein_GI_number: 15676945 # Func_class: R General function prediction only # Function: Protein involved in catabolism of external DNA # Organism: Neisseria meningitidis MC58 # 1 281 1 281 281 451 75.0 1e-126 MLSYRHAFHAGNHADMLKHFTLFLTLEYFNLKDKPYWYIDTHSGAGLYDLRGEQAQKVGE YRQGIARLLQADALPSDLSDFTGRLKEILPDENLYCGSPWLARFLTRECDKLRLFELHPA DFAHLQNNMKEARLGKRGQIAQTDGYRGLISLLPPPPRRAVVLIDPPYEEKQDYRRVVQT LQDALKRFESGCYLVWYPCLSREESRKLPEQLKKLMPENYLQVELYVHKPREDGFGMHGS GMFVVNPPYLLAKKLADTLPKLTEILAQDDAARFVLDYQIK >gi|257257247|gb|ACDX02000006.1| GENE 21 14196 - 14402 80 68 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|288575693|ref|ZP_06393895.1| ## NR: gi|288575693|ref|ZP_06393895.1| putative regulatory protein RecX [Neisseria mucosa ATCC 25996] putative regulatory protein RecX [Neisseria mucosa ATCC 25996] # 1 68 220 287 287 142 100.0 7e-33 MFEHIGVIAGMEGVAVAEHGRGRLKTGKGDYIRKCGRAVAGLSDDLGIVLEANRPDRLPS RNFLFCPI >gi|257257247|gb|ACDX02000006.1| GENE 22 14464 - 16224 1369 586 aa, chain + ## HITS:1 COG:NMB1233 KEGG:ns NR:ns ## COG: NMB1233 COG0507 # Protein_GI_number: 15677105 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Neisseria meningitidis MC58 # 4 582 2 578 581 658 62.0 0 MMAENTADDLNLAAAQAAGRLLERCVPEDAAVLTPYVLRLFTALQNGHSFVWLDEGEAEE LAGLAPTVGQGASPLVLQGRKLFLGRMWQLEHDLAAEIQRLAAAEVEPVDWMSASQNLSG WFADKGSEGQRDAAGLALLQAFILITGGPGTGKTTTVAKLLGLICTNSATRLPRIALAAP TGKAAAHMARALHRAVDGFEMPDAVRNHLSALEGQTVHRLLKLRPPQMLPAFDGNCPLPL DVLVVDEASMLDVSLLLHLLRAIPSGCRVIFLGDEFQLPSVGVGAVLAALSRRTVLDKET AEQLSIYLPEHGFPVEEEPPALSQNVAQLTVSHRFGADSGIGCLARAVVSGKSGEGWAQF ALFSDELEIREGRLKQQAELLYRKHEKYWQAVDKNDVALAFGHAADVVVLAAWRQDAEAL NEEYCRYLQRRHRAGADTPWFAGQIIMIARNDYTLEVFNGDIGLIMPDAESANGLAAYFP NADGFKKIAISRLPQFDSAFAMTVHKSQGSEYREVWLLPPSGKIEQGGDDALSGLNNALL YTAITRARERFVFWGNEEQWRMAVETRKTRRTALGEILDTMFGSTA >gi|257257247|gb|ACDX02000006.1| GENE 23 16472 - 17590 1509 372 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261364544|ref|ZP_05977427.1| ## NR: gi|261364544|ref|ZP_05977427.1| hypothetical protein NEIMUCOT_04719 [Neisseria mucosa ATCC 25996] hypothetical protein NEIMUCOT_04719 [Neisseria mucosa ATCC 25996] # 1 372 1 372 372 678 100.0 0 MNIQKNFAVVCAALAASSFAFAETADAERDAVALATTSDYVNSGSIIRKDEDKISIFNDL LTVNGSFRVRADTKDINANNSSTNPTPEASNTNFNAEFWFRAKLYKDWKLVTQIEPNIDL KTGKFNGDHDVPVNKLYVEGTITEGIKARAGKFGAFSSYGRVWDTAVTGGEIFFDNKTLP TKIYAGRFTGNLNDNAWGIGGRRKHFAAIQSSLPINENINVGATVSYMKDIDVRGTKKNA VFGEIGTDVKFNDDWRWMAAVSKSNIKAYNDAGQKIKNDGVFTEVRYKLADWKVRNSYDA FLNYRRVGALSGVSSVEDYSKNVQGVQIGATYIPWKNWKVSGFYLAGKQVTPTAGTSKQD VNVLRGQVEYKF >gi|257257247|gb|ACDX02000006.1| GENE 24 17741 - 18142 520 133 aa, chain - ## HITS:1 COG:NMA1348 KEGG:ns NR:ns ## COG: NMA1348 COG1188 # Protein_GI_number: 15794270 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) # Organism: Neisseria meningitidis Z2491 # 1 133 1 133 133 188 80.0 3e-48 MKNDHDNTAMRLDKWLWAARFFKTRALAQKHIELGRVQVNGAKVKNSKNISAGDTIDLTL NSLPYKIKVLALNHQRRPAPEARQLYEEDMKTAAEREAQKQLDQASRISAAYPDGRPTKR DRRQLDRMKRDSW >gi|257257247|gb|ACDX02000006.1| GENE 25 18361 - 19320 1177 319 aa, chain + ## HITS:1 COG:NMA1349 KEGG:ns NR:ns ## COG: NMA1349 COG0825 # Protein_GI_number: 15794271 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase alpha subunit # Organism: Neisseria meningitidis Z2491 # 1 319 1 319 319 578 89.0 1e-165 MKPVFLDFEQPIAELTNKIEELRFVQGESAVDISDEIARLQKKSNDLTKSIFNKLTPAQI SQVSRHPQRPYTLDYIQAIFTDFEELHGDRHYSDDHAIVGGLARFNGQSVMVIGHQKGRD TKEKIRRNFGMPRPEGYRKALRLMQTAEKFNIPVMTFVDTPGAYPGIGAEERGQSEAIGR NLYELTRLRVPVLCTIIGEGGSGGALAIAVGDYVNMLQYSTYSVISPEGCASILWKTAEK AADAAQALGITAKRLQELDLIDSVISEPLGGAHRDFETTMKNVKTVLETQLHEAQNMPMA DLLSRRFDRIMAYGKFTDK >gi|257257247|gb|ACDX02000006.1| GENE 26 19505 - 20755 557 416 aa, chain + ## HITS:1 COG:NMA1350 KEGG:ns NR:ns ## COG: NMA1350 COG0037 # Protein_GI_number: 15794272 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control # Organism: Neisseria meningitidis Z2491 # 4 410 16 422 426 384 47.0 1e-106 MVTVGLSGGLDSVVLLHTLACLREELGLDVHALHVHHGLSRNADDWLVFCTRLCQEWNVP FRSAKVEVKKDGLGIEAAARKARYQVFSDDPSSVIALAHHQDDQIETFMLAAVRGGGIKA LAAMPQWRKLNEEKQIWRPLLTFSRKELENYAAACNLPNIEDESNADTAFLRNWMRYEAL PVWRERIPNFDRHVCANIRSLQTDLAILDEVVDADYQTVCESGRFQVSRWQTFSEARRSR ILWRFFKENGIVESSPRKLADFARILLEAETAQWQFGETSVCLYRDFLFILKQSQFADAD WIKGKEVRGRLKDILQENGFFLMPHRNGLPESVLEEEGIIRTAGSDDMMNVGFLFKNVKK MLQENHIVPFVRKCWPIITNADGNCIAIVNLTVSHDFQGIDGFLPVYEKFLRYKWN >gi|257257247|gb|ACDX02000006.1| GENE 27 20839 - 21438 266 199 aa, chain + ## HITS:1 COG:RSc1055 KEGG:ns NR:ns ## COG: RSc1055 COG1595 # Protein_GI_number: 17545774 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Ralstonia solanacearum # 1 199 1 199 199 224 58.0 6e-59 MNDRQIDQVLVERAQKGEQKAFEMLMSKYQRRLIRLISRFVKDEHEVNDVAQEAMIRAYR ALPNFRSESAFYTWLYRIAINTAKNFLVTSGKQPFVSAEAANEDGDILDLSDQIADYHTP EAEMINREILQTVESTISNLPEDLRKAITLREMDGLSYEEIATIMECPIGTVRSRIFRAR EVIAKDLRPLLETSENQRW >gi|257257247|gb|ACDX02000006.1| GENE 28 21443 - 22030 562 195 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261364549|ref|ZP_05977432.1| ## NR: gi|261364549|ref|ZP_05977432.1| sigma-E factor negative regulatory protein [Neisseria mucosa ATCC 25996] sigma-E factor negative regulatory protein [Neisseria mucosa ATCC 25996] # 1 195 1 195 195 307 100.0 3e-82 MVITMNTTHKYISMLMDNDDVSEEMLDRLLSDDTAAEAWYEYHLIGDCMRYKAGTGRDAD FMQSAAFTATLAEISEEHKQRHKAEVAAAMSAKGVQAANNSFFKSFAVAASVAAVAVAVW QFAPQMQSVGLADMVAEKAVETKAQQENIVSVVANPAVKNASDAVVLPESIKNEKGVSQT TVRTEAPTEQDPSVH >gi|257257247|gb|ACDX02000006.1| GENE 29 22209 - 23000 197 263 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 [Bacillus selenitireducens MLS10] # 118 261 102 246 255 80 31 4e-14 MRHMKSITSAQNEQLKHLSKLLSQSKARREYGQTVLEGVHLLQVYLEAGYTPKQVYLPES KNTHPEIRNLISSLDEDCITWVGNEALSKITSLNDADDVMTWIEIPPQGDLPLSGDCVVL DRLQDPGNVGTVLRSAAASGVRQIVLGNDCVDIWSPKVLRAGMGAHLLLNIYSRVSLPQW LDTYQDKIWATALDGRNPSDLYQLDLNAPCAWVFGNEGSGVSREILEKVDGGVRIPMLGQ TESLNVAMAATVCLFEQMRQRIA >gi|257257247|gb|ACDX02000006.1| GENE 30 23126 - 24298 1512 390 aa, chain - ## HITS:1 COG:NMA1592 KEGG:ns NR:ns ## COG: NMA1592 COG1304 # Protein_GI_number: 15794485 # Func_class: C Energy production and conversion # Function: L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases # Organism: Neisseria meningitidis Z2491 # 1 385 1 385 390 758 97.0 0 MKRDLSKMTCIEDLRLVAKRKMPRMFYDYIDSGSWTETTYRENTSDFKDIRFRQKVLVNM EGRSLETKMIGQDVKMPVAIAPTGFTGMAHADGEILAARAAEKFGIPFTLSTMSICSIED VAENTSAPFWFQLYVMRDREFMENLIKRAKDAKCSALVLTADLQVLGQRHKDIKNGLSAP PKPTIANLINLATKPEWCMKMLNTERRTFRNIVGHAKNVGDLSSLSSWTSEQFDPRLSWD DVARIKDLWGGKLIIKGIMEPEDAEKAAKSGADALVVSNHGGRQLDDTVSSIKALPDIVS AVGSDIEVWMDSGIRSGQDVLKAWALGAKGTMIGRAFLYGLGAYGEEGVTRALEILYKEM DISMAFTGHRNIQDVDASILQSTRWPNDKF >gi|257257247|gb|ACDX02000006.1| GENE 31 24656 - 25102 630 148 aa, chain + ## HITS:1 COG:NMA1593 KEGG:ns NR:ns ## COG: NMA1593 COG1959 # Protein_GI_number: 15794486 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Neisseria meningitidis Z2491 # 1 148 1 148 148 250 90.0 6e-67 MRLTTKGRFAVTAMIDLAMNAQTGAVKLSAISERQSISLSYLEQLFSKLRRAGLVESLRG PGGGYILAAPPAQINIAQIISAAEDKLDATQCSSKANCYHGAPCLTHDLWENLNKTINDY LSSVTLQSIIEQKNSDDGSHVIQFTHIH >gi|257257247|gb|ACDX02000006.1| GENE 32 25132 - 26346 1986 404 aa, chain + ## HITS:1 COG:NMA1594 KEGG:ns NR:ns ## COG: NMA1594 COG1104 # Protein_GI_number: 15794487 # Func_class: E Amino acid transport and metabolism # Function: Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes # Organism: Neisseria meningitidis Z2491 # 1 404 1 404 404 788 98.0 0 MTVKTPVYLDYAATTPVDKRVAEKMIPYLTETFGNPASNSHAFGWTAEEAVEKARADIAA LINADPKEIVFTSGATESDNLAIKGAANFYKTKGKHLITVKTEHKAVLDTMRELERQGFE VTYLGVQENGLIDLEELKAAIRDDTILISVMWVNNEIGVVQDIPAIGEICRERKIIFHVD AAQACGKVPVDVEAAKIDLLSMSGHKVYGPKGIGALYVRRKPRVRLEAQMHGGGHERGFR SGTLPTHQIVGMGEAFRIAKEELEQDMAHYRKLRDIFLKGIEGIEEVYINGDLEHRAPNN LNVSFNFVEGESLIMAVKELAVSSGSACTSASLEPSYVLRALGRNDELAHSSLRITFGRM TTEEEVQFAAELIKSKIGKLRELSPLWEMFKEGIDLNSIEWAAH >gi|257257247|gb|ACDX02000006.1| GENE 33 26505 - 26738 179 77 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261364554|ref|ZP_05977437.1| ## NR: gi|261364554|ref|ZP_05977437.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 77 32 108 108 150 100.0 2e-35 MGIRYSEDLKVVDRSTFLKYIETLGNYNKTEIVTPDSECKVILYIKSFHDRPAMAVAIHN QCENIFQIDPTVINVFK >gi|257257247|gb|ACDX02000006.1| GENE 34 26900 - 27028 163 42 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNEQDLDLDNLDNLLEDFDGVTVEGGVDSENDDGCEGGACKI >gi|257257247|gb|ACDX02000006.1| GENE 35 27097 - 27483 720 128 aa, chain + ## HITS:1 COG:NMA1596 KEGG:ns NR:ns ## COG: NMA1596 COG0822 # Protein_GI_number: 15794489 # Func_class: C Energy production and conversion # Function: NifU homolog involved in Fe-S cluster formation # Organism: Neisseria meningitidis Z2491 # 1 128 1 128 128 243 99.0 5e-65 MAYSDKVIDHYENPRNVGTFDKNDESVGTGMVGAPACGDVMRLQIKVNDEGIIEDAKFKT YGCGSAIASSSLITEWVKGKSLDDALAIKNSEIAEELELPPVKIHCSILAEDAVKAAVAD YRKRQENK >gi|257257247|gb|ACDX02000006.1| GENE 36 27930 - 28175 329 81 aa, chain + ## HITS:1 COG:no KEGG:D11S_0049 NR:ns ## KEGG: D11S_0049 # Name: not_defined # Def: hypothetical protein # Organism: A.actinomycetemcomitans # Pathway: not_defined # 1 75 15 89 92 97 60.0 2e-19 MPFTDEEAQSLLAVKGIGKTVLQRLQQMGLDDVATLAAADLEDILEQGAKLTGSTCWKNS PQAKAAVSAAIEWAKQRFQTT >gi|257257247|gb|ACDX02000006.1| GENE 37 28244 - 28564 431 106 aa, chain + ## HITS:1 COG:NMB1381 KEGG:ns NR:ns ## COG: NMB1381 COG0316 # Protein_GI_number: 15677244 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis MC58 # 1 106 21 126 126 203 92.0 7e-53 MITITENAAKHINSYLTKRGKGLGVRLGVKTSGCSGMAYNLEFVDEVNDDDLIFEEHGAR VYIDPKSLVYLDGTQVDYTKEGLQEGFKFENPNVKDSCGCGESFHV >gi|257257247|gb|ACDX02000006.1| GENE 38 28524 - 28745 174 73 aa, chain - ## HITS:1 COG:NMB1382 KEGG:ns NR:ns ## COG: NMB1382 COG3036 # Protein_GI_number: 15677245 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 1 62 1 62 73 96 93.0 9e-21 MSSKVQHNKGKIRDNALKALVKSDLFRHKVERKRKGKGSYNRQEAKKWRDGFDTVPPLFC LKRESSRRSRKSL >gi|257257247|gb|ACDX02000006.1| GENE 39 28828 - 29334 704 168 aa, chain + ## HITS:1 COG:NMB1383 KEGG:ns NR:ns ## COG: NMB1383 COG1076 # Protein_GI_number: 15677246 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-domain-containing proteins 1 # Organism: Neisseria meningitidis MC58 # 1 166 1 166 166 229 78.0 2e-60 MSQYFTLFQLEPAFDIDTKNLEQTYRALAARFHPDKFASASAFEQKQAVMMSSTINDAYR TLKNPIDRAAYLLKAQGIDADAPEHTSFAPEFLMQQMEWRETLMDAQMEQNNEALRALDQ EISREQDKLYQDLRTAFAAKDYEAAAQWVRHGRFLNKLRNEIATALQD >gi|257257247|gb|ACDX02000006.1| GENE 40 29692 - 31971 3338 759 aa, chain + ## HITS:1 COG:NMA1501 KEGG:ns NR:ns ## COG: NMA1501 COG0209 # Protein_GI_number: 15794401 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, alpha subunit # Organism: Neisseria meningitidis Z2491 # 1 759 1 759 759 1482 95.0 0 MNAPTDLKVTKRDGRLENLDLDKIHRVVTWAAEGLKNVSVSQVELKSHIQFYNGIRTDDI HETIIKAAADLISQDTPDYQYLAARLAIFHLRKIAYGEFEPPHLFEHVKKLTDAGKYDRH IIEDYSREEFDELNAYIDHSRDMTFSYAAVKQLEGKYLVQNRVTRQIYETPQFLYILVAM CLFSKYPKETRLDYVKRFYDAVSTFKVSLPTPIMSGVRTPTRQFSSCVLIECDDSLDSIN ATTSAIVKYVSQRAGIGINAGRIRGLGSEIRGGEAQHTGCIPFFKMFQAAVKSCSQGGVR GGAATLFYPLWHIEAESLLVLKNNRGVEDNRIRQLDYGVQINRLLYTRLIKGGNITLFSP NEVPGLYDAFFADQDEFERLYTKYEQDPNIRKRTLSATDLFSTLMQERAGTGRIYIQNVD HCNTHSPFDPRVAPVHQSNLCMEIALPTKPLDNINDPNGEIALCTLSAFNLGALNSLDEL EGLADLTVRALDALLDYQDYPVEAARTATMNRRTLGIGVINYAYYLAKNGVRYSDDSALG LTHRTFEAMQYYLLKASVNLAKEYGACPLFNQTVYSQGKLPIDTYKKDLDAVCSEPLLCD WESLRSDIVKYGLRNSTLTALMPSETSSQIANATNGIEPPRGLVTVKASKDGILKQVVPE FETLKDAYETLWQLPGNEGYLKLVGVMQKFVDQAISANTAYDPGKFEGNKVSMKQMLKDL LTAYKYGVKTLYYHNTRDGADDTQTDIQDDGCAGGACKI >gi|257257247|gb|ACDX02000006.1| GENE 41 32010 - 32933 401 307 aa, chain + ## HITS:1 COG:PM1540 KEGG:ns NR:ns ## COG: PM1540 COG4823 # Protein_GI_number: 15603405 # Func_class: V Defense mechanisms # Function: Abortive infection bacteriophage resistance protein # Organism: Pasteurella multocida # 10 306 6 309 309 268 44.0 1e-71 MQSNQIKEPKIWKTYEEQLEILKNRGLHVADEKKALGYLRTIGYYRLSGYLYPFRQFNPK NPKNRLDSFIPNSSFEDVKKLYMFDKRLRQLALDALERIEIALRVNIAYTLGKHHPLAHK DARYFAPGFNHAEWLERYDNLVHREKETGFVKHHLQHYSDLPVWAACEVWDFGTMSMLYK GMSEEDKNRIAKFYRLKDGRHLQTHLHAFNVIRNVSAHHSRLWNRDIAIKASLKGLSDTE WEKLPVGRSFVYFCLMKRMLDIICPASRWGERFLSLLADFPSVENGAISFEQMGMTINPE KWRLWRK >gi|257257247|gb|ACDX02000006.1| GENE 42 33186 - 34340 1402 384 aa, chain + ## HITS:1 COG:NMB1288 KEGG:ns NR:ns ## COG: NMB1288 COG0208 # Protein_GI_number: 15677155 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, beta subunit # Organism: Neisseria meningitidis MC58 # 1 384 1 384 384 741 94.0 0 MSCEHLVMQYSTFSKQKNDALKEPMFFGQPVNVARYDQQKYEVFEKLIEKQLSFFWRPEE IDVSRDRIDYANLPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSIPELETWIETWS FSETIHSRSYTHIIRNIVNDPSVVFDDIVQNEYIIARAEDIACYYDDLIEYTQYYNLLGE GTHNVGGKLVTVSLRELKKKLYLCLMCVNVLEAIRFYVSFACSFAFAERELMEGNAKIIK LIARDEALHLTSTQHMLNLMRAGSDDPEMAEIAVELQDECFELFKKAAEQEKEWAAYLFK DGSMIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWINAWLSSDNVQVAPQEV EISSYLIGQIDSEVSADDLGDFEL >gi|257257247|gb|ACDX02000006.1| GENE 43 34460 - 34762 243 100 aa, chain + ## HITS:1 COG:HI1309 KEGG:ns NR:ns ## COG: HI1309 COG0633 # Protein_GI_number: 16273221 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Haemophilus influenzae # 7 80 8 81 82 89 56.0 1e-18 MALISTHDKTFELQEGETLLEGLERTGHEVEYQCRSGYCGSCRVKILDGRVSYDDFPLAF VAPGEILPCCCRVNEDIKVDCHARMSEPDLFDVSLFDERE >gi|257257247|gb|ACDX02000006.1| GENE 44 34874 - 35701 555 275 aa, chain + ## HITS:1 COG:no KEGG:NLA_13230 NR:ns ## KEGG: NLA_13230 # Name: not_defined # Def: lipoprotein # Organism: N.lactamica # Pathway: not_defined # 2 263 1 268 280 206 43.0 6e-52 MIKNNTSQFFLLSLAVLLAACSPDKQDKVKESAASAPLSSVFEKSNTNDKTVEVDINKVK SSPSSNCANLHQIGGIDDFVRQVAENIDSSCLFERSPKELAAVWGIPGGDDPLTQAMFPD IDANDPENVNKVIEAIDQMTKGERSYNEQVIEPLVQEMKALRQRDTLVLSIGSHTSQGSN QPLRITRNFGIEATPEYLKKHGDGFGGSFKNISQLPEYLKSRGKIFEAQRAFRLFNRDRS PDKPYLEIVFDESGKIVLINVYENVSNPASGIHLM >gi|257257247|gb|ACDX02000006.1| GENE 45 35878 - 37173 1814 431 aa, chain - ## HITS:1 COG:NMA0819 KEGG:ns NR:ns ## COG: NMA0819 COG0665 # Protein_GI_number: 15793792 # Func_class: E Amino acid transport and metabolism # Function: Glycine/D-amino acid oxidases (deaminating) # Organism: Neisseria meningitidis Z2491 # 1 431 1 431 431 791 83.0 0 MIHPNLKEYLPSYYFSTINPHSAYPKLEGRLKTETCVIGGGLTGLCTALPLAENGHEVIV LEAARVGFGASGRSGGQVISDYACGMEEIEKQVGLEQARWFWQQSLQAVELVDERVRKHH IDCDWQRGYATVAIRKQHWKELRQWHEHAQKHYNATHYELWDKDTLKQQLNSDMYLGAQF DPNSGHLHPLNYTLGIASAAVEAGAQIFEQSPMTRIEPYQGSWLVHTPDGSIECQNLVYA VNTYAGLHNKFKTLEKKAIAISTFIIATEPLGERAQDLIRNNMAVCDNRHVLDYYRLSAD GRLLFGGKDNEFIDDPERMTELVRQDMLKVFPQLADVKIEHSWGGECDITANLAPHFGRL APNIYYAQGYSGHGMAITGIAGLAIAEAIMGDDGRLKPFEKLKHPSIITQPLLRKLGSFL GSKYYQWKDSR >gi|257257247|gb|ACDX02000006.1| GENE 46 37304 - 38191 1372 295 aa, chain - ## HITS:1 COG:NMB0612 KEGG:ns NR:ns ## COG: NMB0612 COG1177 # Protein_GI_number: 15676516 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component II # Organism: Neisseria meningitidis MC58 # 1 295 1 295 295 497 96.0 1e-141 MQKSRLSWFLKLMLMLSLAFLYIPLVVLVIYSFNESKLVTVWGGFSTKWYGALLGNDTIL EAAWLSLRIAAVSSLAAVVLGTLAGYAMARIKRFRGSTLFAGMISAPMVMPDVITGLSML LLIIQVQMFLQGSELLQGLYFDRGFFTIFLGHTTLCMAYITVVIRSRLVELDQSLEEAAM DLGARPLKIFFVITLPLIAPAIASGFLLGITLSLDDLVITSFLSGPGSSTLPQVIFSKIK LGLDPQMNVLATILIGIIGTLVIVINYWMMRQATKRDREAAEAYRQEKLAAEKAN >gi|257257247|gb|ACDX02000006.1| GENE 47 38191 - 39093 1077 300 aa, chain - ## HITS:1 COG:NMB0611 KEGG:ns NR:ns ## COG: NMB0611 COG1176 # Protein_GI_number: 15676515 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component I # Organism: Neisseria meningitidis MC58 # 1 300 22 321 321 513 94.0 1e-145 MPYIWLLVLFLIPFAIVLKISFAEQEIAIPPFTPLTSVDEDLGRLNIAISYQNYADIFQN FWNTLNPFGDSENSNIYLMTYWSSIKTALTTTIICLLIGYPTAYAISRANPAMRNGLLLA IMLPFWTSFLLRVYAWMGLLGHNGIINNFLLKMQIIEEPLDLFYNAFSLNLVMVYAYLPF MILPLYTQLVKLDNRLLEAASDLGAGPVKSFFTITLPLSKTGIIAGSMLVFVPAVGEFVI PELVGGSENLMIGKVLWQAFFDQNNWPLASAVAVVMVALLVVPIALFQHYENRELEEGAK >gi|257257247|gb|ACDX02000006.1| GENE 48 39171 - 40295 1497 374 aa, chain - ## HITS:1 COG:NMB0610 KEGG:ns NR:ns ## COG: NMB0610 COG3842 # Protein_GI_number: 15676514 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport systems, ATPase components # Organism: Neisseria meningitidis MC58 # 1 374 46 419 419 753 97.0 0 MTATTASSAKPYLKIQGLVKKFGDNYAVDNIDLDIYQHEIFALLGSSGSGKSTLLRMLAG MESPNQGKIILDGQDITKLAPYERPINMMFQSYALFPHMTVEQNIAFGLKQDKMPKDEIA ARVEEMLRLVQMTKYAKRKPHQLSGGQQQRIALARSLAKRPKILLLDEPLGALDKKLRQQ TQLELVNTLEQVGVTCIMVTHDQEEAMTMATRIAIMSDGQLQQVGTPSDVYDYPNSRFTA EFIGETNIFSGVVIEDHADYAVIECEGLENHVRIDHGLGGPSEQDIWVSIRPEDIDLYKE KPDHLGSFNWAKGTVEEIAYLGSFAIYHIKLANGRVVKSQVPAPYWYVRNITPPTWDETV YISWPENQPTPLFR >gi|257257247|gb|ACDX02000006.1| GENE 49 40844 - 41524 785 226 aa, chain + ## HITS:1 COG:NMB1038 KEGG:ns NR:ns ## COG: NMB1038 COG2003 # Protein_GI_number: 15676925 # Func_class: L Replication, recombination and repair # Function: DNA repair proteins # Organism: Neisseria meningitidis MC58 # 1 224 1 224 225 351 82.0 5e-97 MSIKQWPEGERPREKLLARGAGALSDAELLAILLRVGTRGMSAVDLARYLLNEFGSLGKL MSADAKTLSAYKGMGLASFTQFAVVKEIGRRILGEDLQENITLSNPKAVADYLRLHLGHE KIEVSTALLLNRQNRLIAMRELSRGTVAENTVYIREIVKLALDEYADSLIIAHNHPGGSA TPSQSDIAFTGRLKQALALVDVSLLDHFIVTATEVCSMREQGYMEG >gi|257257247|gb|ACDX02000006.1| GENE 50 41725 - 42228 713 167 aa, chain - ## HITS:1 COG:no KEGG:NMO_1341 NR:ns ## KEGG: NMO_1341 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 1 158 1 156 156 243 75.0 2e-63 MYDVNTHDVRRFFAHVWRQRLTPLQLDGLQQKALRIIEAHPEYARYLENIEDYLDKTWTP EDGETNPFLHMSLHLSLQEQAAIDQPPGIRAIHGQLCARYGGDWIRAEHDMMDALAETIW EAQRYGRGLDVNAYMTRLRKLVGLGQEETARINPHEVGVSGIISERA >gi|257257247|gb|ACDX02000006.1| GENE 51 42356 - 42955 707 199 aa, chain + ## HITS:1 COG:NMB1963 KEGG:ns NR:ns ## COG: NMB1963 COG2854 # Protein_GI_number: 15677793 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: ABC-type transport system involved in resistance to organic solvents, auxiliary component # Organism: Neisseria meningitidis MC58 # 9 194 14 192 196 120 39.0 2e-27 MNPYLSAFVLSVPMVVAAPYVAAETHPAQAQMQQNMDAVLKIARNGSLSEAQKVKQIEQY ADRYLDYERISALAVGAPWREFSATQKMEFIRAFKEMIIAMYSHSALIGAADAQVRLLPK MTANGNKLDVFSELHTKKGTKYEVAYQLYKVGPVYKIYNIRVDGTSLVTVYRNQFGELIK QKGIDGTIATVKAKGLKKQ >gi|257257247|gb|ACDX02000006.1| GENE 52 43016 - 43675 839 219 aa, chain - ## HITS:1 COG:NMA1368 KEGG:ns NR:ns ## COG: NMA1368 COG3658 # Protein_GI_number: 15794289 # Func_class: C Energy production and conversion # Function: Cytochrome b # Organism: Neisseria meningitidis Z2491 # 1 196 1 195 218 266 65.0 3e-71 MKQKVKVWDLPTRLFHWLLVLSVGFMWYSAQAGGGMLVWHLRCGLLIVGLIIFRLCWGLW GSDTARFAQFVRGPSSIRRYLQGSLTENEQPGHNPLGALMVIALIAAVLLQVTTGLFAAD ENTFTDSGYLNHLVSSDTGSLMRKIHVNFFNLLAGLAGLHVITVLAYKFLKKKDLIHPMI SGYKHIEGQTVALKFASAAKVIAALAVAAAAVAAILMLK >gi|257257247|gb|ACDX02000006.1| GENE 53 43809 - 44708 418 299 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90022317|ref|YP_528144.1| ribosomal protein S15 [Saccharophagus degradans 2-40] # 28 290 242 500 500 165 40 1e-39 MMNPSYTLPDTHDFFQTTSQFPDVFTPRQAESHKGTYGTLAVVGGASGMSGAVVLASTAA IYQGSGKVWAGFNQTALPFAVIPERPEIMLATAEDLLKRSDISVWAVGCGMGLDETANQI LNTVLTQNQDAPLLLDADALTLLARSQPETREAAQKRSNLVLTPHPAEAARLLSASTQAV QQDRMSAVQTISAIFQAVTVLKGHRTLVAAPNGTVYTNQSGNAGLATAGSGDVLSGIIGS LLAQGIAPFQAACAGVWLHGASADVIKHSTGVEAGMLAGEIAPAARWLRNRLMTDKTKV >gi|257257247|gb|ACDX02000006.1| GENE 54 45041 - 46567 1057 508 aa, chain + ## HITS:1 COG:NMA0414 KEGG:ns NR:ns ## COG: NMA0414 COG1178 # Protein_GI_number: 15793419 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+ transport system, permease component # Organism: Neisseria meningitidis Z2491 # 13 504 29 520 530 549 74.0 1e-156 MSSIRSFSSTLLLALLPLGFLIVMVVAPLVALAFYDGSAWGGVLRDDYMQHLILWTAFQA LATCVLAGILGVPAAWVLARLDFRGRAPVLRLLMLPFVMPTLVAGMGVLALFGTNGAVWA GWQDTPYLLIYGNVFFNLPVLVRAAYQGFLQVPEARLQTAQALGAGAWQRFLRVEWPVLR PWLAGGLCLVFLYCFSGFGLALLLGGDRYATVEVEIYRLIAYELDMAQASVLVWLVLGIT AAAGLLYARLSRRTDADKAHAAPRPRKPATAAERLMVAAILSVLCVCCLMPLLAVVRQAA LAGGSWRVLLEGETLAALWNTVRFSAAAVAAAAVLGVSYACLARRAAWVRGAVFLPFMVS PVCVAFGVLLLYPQWTASLPLLIAAYALLAYPFVAKDVLAAWDALPQGYGEAARTMGANR FQTTFYITAPLLKPAFRRGLTLAAATCVGEFAATLFLARPEWQTLTTLIYAYLGRAGADN YSRAMVLTAVLMLFATMVFLLLDGKDED >gi|257257247|gb|ACDX02000006.1| GENE 55 46620 - 47333 877 237 aa, chain - ## HITS:1 COG:PA1402 KEGG:ns NR:ns ## COG: PA1402 COG4122 # Protein_GI_number: 15596599 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Pseudomonas aeruginosa # 56 215 48 208 221 127 49.0 1e-29 MPKLTPQMFAFLQAPQAETVLLRLYTQALKQNRQMFFHFLPKIFKLLGKGLDWTGENESF YEDKYIPIAPQQGKFLYMQALASGAKNIVEFGTSYGISTLYLAAAARVNGGRVITCEYLP HKAAAARKHFQKAGLEDYIELREGDALETLKDLAIRPDFVLLDGWPDLVFPVFKLLEPNL ADRAVIAVDDVEGFSPAMQDYLDYVRRPENGYISSTLKPYKALEYTVKTGNHTEKVV >gi|257257247|gb|ACDX02000006.1| GENE 56 47468 - 48844 1917 458 aa, chain + ## HITS:1 COG:NMA1356 KEGG:ns NR:ns ## COG: NMA1356 COG0773 # Protein_GI_number: 15794277 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate-alanine ligase # Organism: Neisseria meningitidis Z2491 # 1 458 1 458 458 889 94.0 0 MKHIHIIGIGGTFMGGVAAIAKEAGFKVSGCDAKMYPPMSTQLEALGIDVHEGFDAAQLD EFKADVYVIGNVAKRGMDVIEAILNRGLPYISGPQWLSENVLHHHWVLGVAGTHGKTTTA SMLAWVLEYAGLAPGFLIGGVPENFSVSARLPQTPRQDPNSKSPFFVIEADEYDTAFFDK RSKFVHYRPRTAVLNNLEFDHADIFADLGAIQTQFHHLVRTVPSEGLIVCNGQQQSLQDT LDKGCWTPVEKFGIEHGWQVGEVNANGSFDVLLDGKKAGHVAWDLMGGHNRMNALAVIAA ARHAGVDIQTACEALSAFKNVKRRMEIKGTVNGITVYDDFAHHPTAIETTIEGLRQRVGN ARILAVLEPRSNTMKLGTMKAALPESLKGADQVFCYAGGVDWDVAEALAPLGGKLHVGQD FDAFVAEIVKHAEAGDHILVMSNGGFGGIHGKLLEALK >gi|257257247|gb|ACDX02000006.1| GENE 57 48999 - 50912 1723 637 aa, chain - ## HITS:1 COG:NMA1791 KEGG:ns NR:ns ## COG: NMA1791 COG1002 # Protein_GI_number: 15794682 # Func_class: V Defense mechanisms # Function: Type II restriction enzyme, methylase subunits # Organism: Neisseria meningitidis Z2491 # 20 624 225 799 803 1077 86.0 0 MRPSKPSNATKPKNSPPSTKKIQNLQFLDPACGCGNFLIVAYDRIRALEDDIIAEALKDK AGGLFDSPSVQCRLKQFHGIEIDEFAVLIARTAMWLKNHQCNIRTQIRFDGEVACHTLPL EDAAEIIHANSLRTPWQAADYIFGNPPFIGSTYQTKEQKNDLASICGNIKGYGLLDYVCN WYVKAAGIMAQNPRVRTAFVSTNSICQGQQVEILWGSLLNQGIEINFAHRTFQWTSQAAG KAAVHCIIVGFSRKPQTSSENGGANASENPALPKYLYDYPDIKGEPQKHAVANINPYLID APDLIIAKRSRPIHCEPDMVNGSKPTEGGNLILSTDEKDALIGDEPLAEQYIRPFIGAEE FLNGKTRWCLWFQGISDVKRNHALKQMPKVQARIQAVKTMREDSSDNQTQKDAATPWLFQ KIRQPSDGNFLIIPSVSSESRRFIPIGYLSFETVVSNLAFILPNATLFHFGILSSTMHNA FMRTVAGRLKSDYRYSNTVVYNNFPFPESCRKPDDDETALQETTGKKGKKPRSSENNPLR AAIESAAQAILDIREKYRADALNDDLPPPTLAELYAPDAGYPDLVKAHAALDKAVDKAYG YKKGKNTDDEAERVAFLFELYRKAIESENTKPPKKSK >gi|257257247|gb|ACDX02000006.1| GENE 58 50767 - 51930 1115 387 aa, chain - ## HITS:1 COG:NMA1791 KEGG:ns NR:ns ## COG: NMA1791 COG1002 # Protein_GI_number: 15794682 # Func_class: V Defense mechanisms # Function: Type II restriction enzyme, methylase subunits # Organism: Neisseria meningitidis Z2491 # 135 360 1 226 803 439 96.0 1e-123 MKTLLQLQTAAQNFADHYKNQTDERREKDTFWNEFFAIFGIDRKNVAHFEYAVKDPSNNT QFVDVFWEGIFLAEHKSANKNLAKAKEQAERYLQEIERTKPSALPEYYAVSDFAHFHLYR REPEEGAENQWQFPLEALPEYIARGIFDFMFGIEAKVRQIQEEANIQAAAAIGRLHDALQ EEGIYEEHELRLFITRLLFLFFADDSAVFQRNYLFQDFLESCKEADTLGDKLNQLFEFLN TPDQKRSKTQSEKFKGFEYVNGGLFKERLRTFDFTAKQHRALIDCGNFDWRNISPEIFGT LFQSVMDAQERREAGAHYTEAANIDKVINGLFLENLRAEFEAVKALKRDKAKKLAAFYQK NPKPAIPRPGLRLRQLPYRRLRPHPRP >gi|257257247|gb|ACDX02000006.1| GENE 59 52176 - 54038 2451 620 aa, chain - ## HITS:1 COG:RSp0251 KEGG:ns NR:ns ## COG: RSp0251 COG0370 # Protein_GI_number: 17548472 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+ transport system protein B # Organism: Ralstonia solanacearum # 7 615 18 616 621 591 55.0 1e-168 MELSYFALIGAPNCGKTVLFNGLTGAHAKVANYPGVTVDKREGALLDDKAVRIIDLPGTY SLRTTSPDEAVAKDVAVGKLGIPPDAIIAVADATNLRMTLRMILELKTLGLPMVVSLNMS DVARRRGLNIDAAKLSELLDAPVLETVAVSASGVQAVREAVAKLPRKRSFPANPASAERT LEALESDKLYQEVESILAQVVRTEMTLPAWHKKLDDIVLHPVWGIIMLLFILFMVFQAVY TWAAPIMEAIEGGFAALGEWIGTNMEPGILSDLLVNGVIAGLGSVLVFVPQITILFAFIL LLEDSGYLPRAAFLLDNVMAKSGLSGRSFIPLLSSFACAVPAVMSARTINDPRERLVTIA VAPLLTCSARLPVYALIIAAVIPNRTVGGIFNLQGLTLFILYLVGILSAALAAYIMKRLA RMKGNVQQFPLLMELPTFRTPNFKHIMTSLWDRVKAFLKRAGTIIFALAVVLWGLVSWPQ PPAGATGAAIDYSLAGMLGHAIQPLFAPLGFTWEMCIAMIPGIAAREVVVAALGTVYAVS ASSEDAVQNALIPIVHNNWGLPTAFAFLAWYVYAPMCAATLAVIKRETKSTKNMVMITGY LFLMAYFAAFVVYQITSRIM >gi|257257247|gb|ACDX02000006.1| GENE 60 54067 - 54351 65 94 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSLALDWGKGFETALSDDPGRLKRIGRSDLTCLCRTFPEYEACLRVRRLAVNHVAHNFSR FFLPQRELRLVAQTHGKRTASESADGNHLQRHSA >gi|257257247|gb|ACDX02000006.1| GENE 61 54211 - 54477 359 88 aa, chain - ## HITS:1 COG:no KEGG:MS1159 NR:ns ## KEGG: MS1159 # Name: not_defined # Def: hypothetical protein # Organism: M.succiniciproducens # Pathway: not_defined # 4 85 3 84 86 116 69.0 3e-25 MSAIPLSKLSKGAVAHIDSIVPNSTFGELDPLVTRRLADLGFSSGMPLQVIAVGGFGRGP FAVRLGNQSQFSLRQEEAGKIMCHVIDG >gi|257257247|gb|ACDX02000006.1| GENE 62 54796 - 55422 248 208 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|153833204|ref|ZP_01985871.1| ribosomal protein S15 [Vibrio harveyi HY01] # 1 207 7 213 512 100 33 5e-20 MKIYTAAEMREHEQMAVDKGTTFEQLMENAGQAAAADLLRRFPKAGRALIVCGKGNNGGD GLVIARVLSEHDWQADVVFVLGDKLSSLAQLNRERLNHLDGVSFIRSDELEGRLKTGYGL VIEGIFGTGFSGALPETAAAVCRLLNQADGFKIALDIPTGLNCDTGEADQNTFRADLTYT FAAYKPAHMTEAGKAYCGETVCLDIGIE >gi|257257247|gb|ACDX02000006.1| GENE 63 55628 - 56908 1630 426 aa, chain - ## HITS:1 COG:no KEGG:KRH_22440 NR:ns ## KEGG: KRH_22440 # Name: not_defined # Def: acyltransferase (EC:2.3.1.-) # Organism: K.rhizophila # Pathway: not_defined # 1 426 137 574 577 209 30.0 3e-52 MEQWKILQGAARVPQKEVDGFRFSPNGSRHIGVLHNGFYYRIAVLDEQFEAYHPDAFRQA FEEILSDTHQNKYPLVVPCYLGGNETARVYQALQQHDDNTRLLEHIEQDLFHISISSEDL DADSDLAQTTFQPKQNVWCYKPTTYCYNTRTKRLYLHCEHTWADGGALKGIVTLAAAKLA ARGGKKTRPAVHRFEWQLDVNLLKNWAQWQQNYAKQADQMHVTSVTIPFNGLTIPKGVSQ DALMQFLLQYAQLTTYGSVRNTYEAVDVSHFKNGRTECVRPVSNESLAFVSTLLQEKPSR EALDAALAEHKARIKASKLGQGANRHLLGLKLMAAKTNSQPVFFKDEGYETFTTDFLSTS TVGDNSTVVNFAFAPTSVGGLGINYTITPEGWLYTVSHTKNQQQKVNVFLEALKVGGQHL LEFLNA >gi|257257247|gb|ACDX02000006.1| GENE 64 57532 - 58575 1118 347 aa, chain + ## HITS:1 COG:NMA1243 KEGG:ns NR:ns ## COG: NMA1243 COG1613 # Protein_GI_number: 15794178 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type sulfate transport system, periplasmic component # Organism: Neisseria meningitidis Z2491 # 1 347 1 351 351 502 71.0 1e-142 MTVRATALFAVAVLAACSPQSEQNTASPSSPAADGKGVKLLNVSYDVARDFYKEYNPLFV REYQSKHNGADIDIQQSHGGSSKQALSVANGLAADVVTMNQTSDIDLLAQKGLIKPDWAK RLPDNAVPYTSVTVFLVRKGNPKQIKDWNDLAKDGVKIVLANPKTSGNGRYAFLGAYAYG LKANNGDEAKAQEFAASVLKNTPVFENGGRAATTTFSQRNIGDVLVTFENEANHVSKKLT QDQFEIVYPSYTILSETPVAVVDSVADKKGTQEAAKEYLEYLWSKPAQELAAKLYLRPRN AEVFAAHKADFPEIETFSPNEKFGTWDEIMKKFFADGGLVDKLSPKR >gi|257257247|gb|ACDX02000006.1| GENE 65 58737 - 59645 826 302 aa, chain - ## HITS:1 COG:RSc2109 KEGG:ns NR:ns ## COG: RSc2109 COG0697 # Protein_GI_number: 17546828 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Ralstonia solanacearum # 10 299 3 292 316 278 52.0 9e-75 MYRLTAYPISPKQATFIGLFAVCFWSSVIGLIRTLSLHMGAVGGAAVMYSLATILLLLIF GKPDLRRFSRNYLFWAGIFFVGCELCLSLSIGYADNARQTVEIGMVNYLWPTFTIIGAVW FNKQPAKWWIAIGFALSFIGIAIVLGGEGGLSPAHIYRNVLANPAGYIMALLDALFWAAY CTLTARVKAQGNAVGFFFFLVSCVLWAKYFAGSYGSLNFDTESVLYALAAASCMGLGYAV WNIGISRGNMTVLAGASYFIPVFSALISSFLLDAPLPTEFWQGAAMVCIGSAVCWLATQK KA >gi|257257247|gb|ACDX02000006.1| GENE 66 60119 - 61180 1517 353 aa, chain - ## HITS:1 COG:NMA1358 KEGG:ns NR:ns ## COG: NMA1358 COG0502 # Protein_GI_number: 15794279 # Func_class: H Coenzyme transport and metabolism # Function: Biotin synthase and related enzymes # Organism: Neisseria meningitidis Z2491 # 1 353 1 350 350 673 91.0 0 MTISPVALRRKTERKPHPTARYWKKCDVEALFGLPFLDLVYQAAEIHRQNFNPREIQLST LLSIKTGGCPEDCAYCPQSAHHNTNLGKEQMMDVDEIVEKAKIAKSRGASRFCMGAAWRG PKPKDVETVSAIIKAVKGLGMETCGTFGMLEDGMAEDFKKAGLDYYNHNLDTDLERYNDI IHTRKHEDRMDTLGKVRNAGLKVCCGGIVGMNETRAERAGLIASLANLDPQPESVPINQL VKVEGTPLADAEDLDWTEFVRTIAVARITMPHSYVRLSAGRSNMPESMQAMCFMAGANSI FYGDKLLTTENPDEDGDRLLMEKLNLYPLRFELEEEYEAAQQENETPKIKVDY >gi|257257247|gb|ACDX02000006.1| GENE 67 61707 - 62681 1349 324 aa, chain - ## HITS:1 COG:NMB1060 KEGG:ns NR:ns ## COG: NMB1060 COG0158 # Protein_GI_number: 15676944 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1,6-bisphosphatase # Organism: Neisseria meningitidis MC58 # 1 322 1 322 324 521 79.0 1e-148 MTTFAQFLPEHLQQNALPEQLGSVLESVISACSEISGKVRLGALSGVLGMAGTGNIQGED QKKLDVIANDILIRILKDNPSVAGLASEEEDTFVAAHPDGRYLVLFDPLDGSSNIDVNIS VGTIFSILEKPEGDLETASFLQKGRDQVAAGYVLYGPQTQLVLTVGDGVSVFTLDEDGNF VMTKENPRVPETTKEFAINMSNRRHWLPPVQRYIDELLAGETDSRGKNYNMRWVASMVAE IHRILMRGGVFMYPQDKRDLSKPGKLRLMYEANPMSLILEQAGGAAFDGQIDMLDVEPVG LHQRVAVFMGSKEEVDYIRKLHQA >gi|257257247|gb|ACDX02000006.1| GENE 68 62759 - 63127 343 122 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|288575725|ref|ZP_05977471.2| ## NR: gi|288575725|ref|ZP_05977471.2| hypothetical protein NEIMUCOT_04780 [Neisseria mucosa ATCC 25996] hypothetical protein NEIMUCOT_04780 [Neisseria mucosa ATCC 25996] # 1 122 1 122 122 191 100.0 2e-47 MMKKTNVLSLFLVLAATACSDGSSDSVTDKFKSEFRKGFVEGATEQCVAKVPKTSLLSEE TVLQVCTCTAEKMADRISVEDMSAILSGNINENVKEQIKQSTTDCLKETVGLDGKRAASD SK >gi|257257247|gb|ACDX02000006.1| GENE 69 63303 - 64646 1107 447 aa, chain + ## HITS:1 COG:NMA1053 KEGG:ns NR:ns ## COG: NMA1053 COG0617 # Protein_GI_number: 15794003 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA nucleotidyltransferase/poly(A) polymerase # Organism: Neisseria meningitidis Z2491 # 1 429 1 431 453 624 71.0 1e-178 MLKKWLNKVLSGRQSRQTEVRKEIIPAEEYRINADMISFAAEKTVKRLQEEGFKAYIVGG AVRDLLLGVEPKDFDVATDATPEQVRKIFRRSRIIGRRFQIVHVMTGPETIEVTTFRGGG KVQQNAHGRIMKDNTYGSIEEDAMRRDFTCNALYYDPICEEILDFHNGVNDIAARSLVMI GDAAERYREDPVRILRAVRLSGKLGFSVEESTAAPIPEYASRLKHEPVARLFDEIMKLLF SGHARECLKKLNSLGVSDDIHPLLTALKSAEKAENRIISLALKNTDERLRQDKSVSVGFV LAAVLWPDVNRRWQQNLAQGQKPAPALTDAIESLRSDVEKGWGVPQRFAATMREIWQFQP QFEQMRGARPHRLLAQQRFRAAYDFLVLRGEVGEIDRQTVEWWNSFQHADEGLRNEMTTN HARAQGNEGVKKKRRRRPHKKKTEQEQ >gi|257257247|gb|ACDX02000006.1| GENE 70 64981 - 65895 1327 304 aa, chain - ## HITS:1 COG:NMB1374 KEGG:ns NR:ns ## COG: NMB1374 COG0130 # Protein_GI_number: 15677239 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridine synthase # Organism: Neisseria meningitidis MC58 # 2 302 3 303 307 516 87.0 1e-146 MTAKTAKRPVNGVLLLDKPEGLSSNTSLQKARRLYNAEKAGHTGVLDPLATGLLPVCFGE ATKFAQYLLDADKAYTATLKLGEASSTGDAEGEIIATARADISLAEFQTACQALTGDIRQ VPPMFSALKHEGKPLYEYARKGIVIERKPRDITIYAIDITEFDAPKAVIDVRCSKGTYIR TLSEDIAKHIGTFAHLTALRRTETAGFTIRESHTLEALAELNETERDALLLPCDVLVRHL PKIELNDRAVTMLKCGQRPQFTEDISADQPIRVYNRSGTFIGLVEYQKEIGRLKALRLMN TAKD >gi|257257247|gb|ACDX02000006.1| GENE 71 66005 - 66376 679 123 aa, chain - ## HITS:1 COG:NMB1373 KEGG:ns NR:ns ## COG: NMB1373 COG0858 # Protein_GI_number: 15677238 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-binding factor A # Organism: Neisseria meningitidis MC58 # 1 123 1 123 123 200 89.0 6e-52 MRKPQRGYARQDRVKEQIMRELAELVRTGLKDPRAGFITINEVEVTRDYSHATVFYTVLD DSTRDITEEALEHAKGHLRSELAKRIKLFKTPELHFKYDESLERGMSISSLIDQVAAEKP VED >gi|257257247|gb|ACDX02000006.1| GENE 72 66495 - 67535 878 346 aa, chain + ## HITS:1 COG:PM0652 KEGG:ns NR:ns ## COG: PM0652 COG0673 # Protein_GI_number: 15602517 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Pasteurella multocida # 4 344 5 345 350 408 56.0 1e-114 MRKIKIGLAGFGMSAQVFHLPFWRADARFEVVRVFERSGNRAQEVLPQAQTVRSFEELLT DDVDLVVVTTPNQTHFDFAVQALRAGKNVVVEKPLCATAAQALKLAELAERQGVLLTVYQ NRRWDSAPLTAKKLLSDDLLGEIVDAEFRFERYAAALNKKRWKETGEAGVGLVYDLGSHL MDMAVDIFGMPDELYADVRYQHDGAVSDDNFDIALYYADGKKVALTASKYAREPLPFMTL HGKRGSYIKQNVDNQEALLLGGAQPVGAWSREPEDESGILHTEIDGAVVRKKIESVSGNY AAFYENLYDALQGKSPAAVQPRQVAQVLGLLEKVYESAKSGCRVKV >gi|257257247|gb|ACDX02000006.1| GENE 73 67978 - 69024 1697 348 aa, chain - ## HITS:1 COG:NMB1445 KEGG:ns NR:ns ## COG: NMB1445 COG0468 # Protein_GI_number: 15677302 # Func_class: L Replication, recombination and repair # Function: RecA/RadA recombinase # Organism: Neisseria meningitidis MC58 # 1 348 1 348 348 607 90.0 1e-174 MSDEKSKALAAALAQIEKNFGKGSIMKMDGSQQEENLDVISTGSLGVDLALGVGGLPRGR VVEIFGPESSGKTTLCLEAIAQCQKTGGICAFIDAEHAFDPVYARKLGVKVEELYLSQPD TGEQALEICDTLVRSGGVDMVVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTG HIKRTNTLVVFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGQIKKGDDVIGN ETKVKVIKNKVAPPFRQAEFDILYGEGVSWEGELIDLGVKYNIVEKSGAWYSYNGAKIGQ GKDNVRVWLKENPEVANEIDAKIRAAVGINVDITEGKLDDTDGERPEE >gi|257257247|gb|ACDX02000006.1| GENE 74 69288 - 69638 402 116 aa, chain + ## HITS:1 COG:no KEGG:NLA_8450 NR:ns ## KEGG: NLA_8450 # Name: not_defined # Def: transposase # Organism: N.lactamica # Pathway: not_defined # 1 116 106 221 221 208 96.0 5e-53 MSKYTLHFKYQAVLHYLHIRSQQRTADHYGISRTHLRRWIRAYQEGGIGALEHPQSKTMT DHRKNPFIADKPDHEKTQAELIEELCYMRAKVAYLKELKALSQKRTEKDKAKPSKH >gi|257257247|gb|ACDX02000006.1| GENE 75 69947 - 70543 560 198 aa, chain + ## HITS:1 COG:HI1721 KEGG:ns NR:ns ## COG: HI1721 COG2801 # Protein_GI_number: 16273607 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Haemophilus influenzae # 1 193 20 213 216 182 50.0 2e-46 MKQLELKALIRAKKAYRHPAMGKISEHLLKRRFTAKKPNEKWLTDVTELKGKDGKLYLSP ILDLFNREIVAYAMSRNANSEMVKEMLEKAAPRLTDKGTMLHSDQGVLYRTAGYRELLAQ HSMVQSMSRKANCWDNAPMESFFAVLKTECFYRAGELTVDELMKQIDDYMDYYNRERCSL KLKKLSPVAYRTQLTQSA >gi|257257247|gb|ACDX02000006.1| GENE 76 70613 - 71425 1319 270 aa, chain - ## HITS:1 COG:YPO1381 KEGG:ns NR:ns ## COG: YPO1381 COG1180 # Protein_GI_number: 16121661 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Yersinia pestis # 27 270 3 244 244 345 61.0 4e-95 MQTTIAITPETPAPAKDLGHRHYNGKGIVHSVESCGAVDGPGLRYVLFLQGCLMRCLYCH NRDTWDLHTEQAQEMTVPEVMKQVMSYRHYLRATGGGVTATGGEPLLQYEFVRDWFTACY EHDIHTCLDSNGYALHYDSILDDLLDHTNLVMLDLKQIDPEIHKVLVGIPNTKTLKFAHY LAERKQPARVRYVVVPGYTDDDRSAHLLGEFIADMDNIEMVELLPYHELGAHKWALCGDT YKLTGVHPPPKETILKIKSILESYGKNIIY >gi|257257247|gb|ACDX02000006.1| GENE 77 71717 - 74002 2997 761 aa, chain - ## HITS:1 COG:HI0180 KEGG:ns NR:ns ## COG: HI0180 COG1882 # Protein_GI_number: 16272145 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Haemophilus influenzae # 1 761 3 772 772 1306 80.0 0 MSTDVQQRPAAWEGFAGGNWETNVDVRDFIQKNYTPYEGDASFLAPATEATTKLWADVME GIKVENRTHEPYKIDAQVVSGITSHAPGYINKDLETIVGLQTDEPLKRSIMPFGGLKMVQ DACKVYNVELNPEVSEIFTKYRKTHNQGVFDVYTPDIRRCRKSGVITGLPDAYGRGRIIG DYRRVALYGIDFLMADKFNQFNSLQADLESGVDLEEVIRRREEINDQYKALGQMKEMAAS YGYDISGPAKNAQEAIQWTYFAYLAAVKSQNGAAMSFGRVSSFLDIYIERDLKNGVITET QAQEFIDHLVMKLRMVRFLRTPEYDQLFSGDPIWATESIGGMGLDGRTLVTRTNFRVLHT LYNMGPSPEPNITVLWSEQLPQGFKEFCAKVSIDTSSIQYENDDLMRPDFNSDDYAIACC VSPMVVGKQMQFFGARANLAKTLLYAINGGVDEKSKDQVGPKTEPILDEVLDYDTVFARM DKFMDWLATQYVTALNIIHYMHDKYSYEAALMALHDRDVKRTMACGIAGLSVAADSLSAI KYAKVKPIRDENGIAVDFEIEGEYPQFGNNDDRVDDIACDLVERFMKKVATHKTYRNATP TQSVLTITSNVVYGKKTGNTPDGRRAGAPFGPGANPMHGRDVNGAVASLTSVAKLPFEFA KDGISYTFSIVPGALGKDESSRERNLAGLMDGYFHHEEGELEGGQHLNVNVLTRETLEDA MNNPDKYPQLTIRVSGYAVRFNSLTREQQLDVITRTFTQTM >gi|257257247|gb|ACDX02000006.1| GENE 78 74421 - 74894 814 157 aa, chain - ## HITS:1 COG:NMA1376 KEGG:ns NR:ns ## COG: NMA1376 COG2193 # Protein_GI_number: 15794297 # Func_class: P Inorganic ion transport and metabolism # Function: Bacterioferritin (cytochrome b1) # Organism: Neisseria meningitidis Z2491 # 1 157 1 157 157 257 93.0 7e-69 MKGDRLVIRELNKNLGLLLVTINQYFLHARILKNWGFEELGEHFFKQSIREMKSADDLIE RILFLEGLPNLQELGKLLIGESTEEILTCDLTKEQEKHDALVAAIAIAEQQQDYVSRDLL EKQKDINEEHIDWLETQQELIGKVGLPNYLQTAAQED >gi|257257247|gb|ACDX02000006.1| GENE 79 74919 - 75383 802 154 aa, chain - ## HITS:1 COG:NMB1207 KEGG:ns NR:ns ## COG: NMB1207 COG2193 # Protein_GI_number: 15677080 # Func_class: P Inorganic ion transport and metabolism # Function: Bacterioferritin (cytochrome b1) # Organism: Neisseria meningitidis MC58 # 1 154 1 154 154 278 95.0 4e-75 MQGNQSVIDYMNELLSGELAARDQYFIHSRLYSEWGYTKLFERLNHEMEEETTHAEDFIR RILMLGGTPKMTRAELNIGTDVVSCLKADLNTEYEVRDALKKGIKLCEEAQDYVTRDLMI AQLKDTEEDHAHWLEQQLRLIELVGEGNYYQSQM >gi|257257247|gb|ACDX02000006.1| GENE 80 75862 - 77673 2641 603 aa, chain + ## HITS:1 COG:NMA1370 KEGG:ns NR:ns ## COG: NMA1370 COG1217 # Protein_GI_number: 15794291 # Func_class: T Signal transduction mechanisms # Function: Predicted membrane GTPase involved in stress response # Organism: Neisseria meningitidis Z2491 # 1 603 1 603 603 1178 99.0 0 MKQIRNIAIIAHVDHGKTTLVDQLLRQSGTFRANQHVDERVMDSNDIEKERGITILAKNT AIDYEGYHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGL KPIVVINKIDKPSARPSWVIDQTFELFDNLGATDEQLDFPIVYASGLSGFAKLEETDESN DMRPLFDTILKHTPAPSGSADETLQLQISQLDYDNYTGRLGIGRILNGRIKPGQVVAVMN HDQQIAQGRINQLLGFKGLERVPLEEAEAGDIVIISGIEDIGIGVTITDKDNPKGLPMLS VDEPTLTMDFMVNTSPLAGTEGKFVTSRQIRDRLQKELLTNVALRVEDTADADVFRVSGR GELHLTILLENMRREGYELAVGKPRVVYRDIDGQKCEPYENLTVDVPDDNQGAVMEELGR RRGELTNMESDGNGRTRLEYHIPARGLIGFQGEFMTLTRGVGLMSHVFDDYAPVKPDMPG RHNGVLVSQEQGEAVAYALWNLEDRGRMFVSPNDKIYEGMIIGIHSRENDLVVNPLKGKK LTNVRASGTDEAVRLTTPIKLTLEGAVEFIDDDELVEITPQSIRLRKRYLSELERRRHFK KLD >gi|257257247|gb|ACDX02000006.1| GENE 81 77855 - 78097 198 80 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261364601|ref|ZP_05977484.1| ## NR: gi|261364601|ref|ZP_05977484.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 80 1 80 80 146 100.0 5e-34 METLHPETCRTYGEYGGMFKSAQTLEPFIARMLERDTEALRSMAWDCLYWNKELCRLRPE WDEWLKEEIRNLKDKYGENR >gi|257257247|gb|ACDX02000006.1| GENE 82 78204 - 78581 345 125 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|255065233|ref|ZP_05317088.1| ## NR: gi|255065233|ref|ZP_05317088.1| conserved hypothetical protein [Neisseria sicca ATCC 29256] conserved hypothetical protein [Neisseria sicca ATCC 29256] # 1 98 12 109 189 161 79.0 2e-38 MNISQLPLWQTPEQVCDILLALPEKQRNRALYELVFLFDHDNPQGRTEAESQLATLRLLW HDPRFQGLENIKHWLRDVLALDEVNGSCVEINSVVYTFSFCLKTRLSSYPALSRMSIDTG NPLCS >gi|257257247|gb|ACDX02000006.1| GENE 83 78738 - 79724 1274 328 aa, chain - ## HITS:1 COG:NMA1378 KEGG:ns NR:ns ## COG: NMA1378 COG0320 # Protein_GI_number: 15794299 # Func_class: H Coenzyme transport and metabolism # Function: Lipoate synthase # Organism: Neisseria meningitidis Z2491 # 1 328 1 327 327 654 97.0 0 MSEIKVDDPKRGVKLKGADKTARIPIKVVPLQEKLKKPEWIRAKLPSKKFFEIKDILREQ KMHTVCEEASCPNIGECFSKGTATFMIMGDICTRRCPFCDVGHGRPNMLDPDEPKNLAES VKAMNLRYVVITSVDRDDLRDGGAQHFADCIKAIRETSPNTKIEILVPDFRGRLDIALKI LAETPPDVMNHNLETHPSLYKKARPGANYQHSLDLLRRYKEMMPHIPTKSGIMVGLGETD EDVREIMRDMRAHNIEMITIGQYLQPSDGHLPVLRYVTPDQFKIFEKEAYELGFTNAAIG AMVRSSYHADEQAAEALRESHGGGCGHH >gi|257257247|gb|ACDX02000006.1| GENE 84 79724 - 80341 891 205 aa, chain - ## HITS:1 COG:NMB1217 KEGG:ns NR:ns ## COG: NMB1217 COG0321 # Protein_GI_number: 15677090 # Func_class: H Coenzyme transport and metabolism # Function: Lipoate-protein ligase B # Organism: Neisseria meningitidis MC58 # 18 205 1 188 190 365 94.0 1e-101 MKIVHKGMVEYQPTFEAMKAFNAARDEHTEDELWVVEHPPVFTQGLAGKPEHLLIRDDIP VVQIDRGGQITYHGPGQLVVYTMINFKRRKTSVRNIVSALENSIIATLAEYGIEAAADPK RPGVYVGERKIASLGLRIKDGSVYHGLALNVNMDLSPFTHINPCGYAGMEMTQIADFVQP CPTLDEVAQKLTAHLETQLTPKANN >gi|257257247|gb|ACDX02000006.1| GENE 85 80343 - 80609 466 88 aa, chain - ## HITS:1 COG:NMA1380 KEGG:ns NR:ns ## COG: NMA1380 COG2921 # Protein_GI_number: 15794301 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 3 87 6 90 91 124 74.0 3e-29 MTDQTSLIEFPCQFPIKVMGDSHPEFEKNILETVRKHAPDTEPHHITTRLSSKGNYTGAT VKVNVDSKEQLDKIYRALTDHEMVKVVY >gi|257257247|gb|ACDX02000006.1| GENE 86 80810 - 83272 2953 820 aa, chain + ## HITS:1 COG:NMA1398 KEGG:ns NR:ns ## COG: NMA1398 COG0466 # Protein_GI_number: 15794311 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATP-dependent Lon protease, bacterial type # Organism: Neisseria meningitidis Z2491 # 1 820 1 820 820 1402 90.0 0 MPTKEKHFEEYSALATLPLRDVVVYPHMVLPLFVGRPKSIAALEAAMANDDPVFLLAQID PNTEDPTASDLHRTGTVAQVLQVLKLPDGTVKVLVEGIRRGRVLTIEESGGLFLSHVEAV DEYADADNPDIEAIRRTLLTQFDQYAKLNKKIPAEIINTINGIDDNSRLVDTIAAHLQLK LEQRQQILETFGIIGRMEFLLAQLESELDIMQVEKRIRGRVKRQMEKSQREYYLNEQVKA IQKELGEEDERGELDALEAKIKEAGMTKEAEEKCLSELKKLKMMPPMSAESTVVRNYIDT LLELPWKKKSRVSKDIAKADLVLNADHYGLEKVKERILEYLAVQKRMDKLKGPILCLVGP PGVGKTSLGESIAKATGRQYVRMALGGVRDESEIRGHRRTYIGSMPGKILQNMAKAGVRN PLFLLDEIDKLGSDFRGDPASALLEVLDPEQNNKFADHYAEVDYDLSDVMFIATSNSLNI PTPLLDRMEIIRLSGYTEDEKINIAMQYLVPKQMKRNGVKEGELVVEESAVRDIIRYYTR EAGVRSLDREIAKICRKVVMQITLNEDKKRSSETKKTSKAKPKAVKVNEKNLHDYLGVRR FDYGVAESENRIGQVTGLAWTEVGGELLTVEAVALPGKGVIQCTGQLGDVMKESVSAAWS VVRSRAESVGLAPDFYEKKDIHVHVPEGATPKDGPSAGIAMTLAMVSAFTKIPVRADVAM TGEITLRGEVLPIGGLKEKLLAALRGGIKHVLIPKDNVKDLEEIPENVKTGLTIHPVKWI DEVLTLGLESQPTPWVAPLSTEETQVEAAKPKSRAKATKH >gi|257257247|gb|ACDX02000006.1| GENE 87 83457 - 83726 346 89 aa, chain + ## HITS:1 COG:NMA1397 KEGG:ns NR:ns ## COG: NMA1397 COG0776 # Protein_GI_number: 15794310 # Func_class: L Replication, recombination and repair # Function: Bacterial nucleoid DNA-binding protein # Organism: Neisseria meningitidis Z2491 # 1 89 1 89 89 127 96.0 5e-30 MNKSELIEAIAQEAGISKAAAQKALDATTNAVTNALKKGDTVTLVGFGTFYVGERAERQG RNPKTGEPLTIAAAKTPKFRAGKALKDAL >gi|257257247|gb|ACDX02000006.1| GENE 88 83815 - 84198 234 127 aa, chain - ## HITS:1 COG:no KEGG:NMB0794 NR:ns ## KEGG: NMB0794 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis # Pathway: not_defined # 1 114 1 114 120 126 58.0 2e-28 MKLPLNKFTLLAAAWFAASIYALLFKESGNAPPPFPNFDKVAHFITFFAQTWLIAKTFLS EQKRVPYKKLLIFALLFAFFSEWAQATFTTTREGSLGDGIADMLGTMAALWFAKKVESAK LQNQKPI >gi|257257247|gb|ACDX02000006.1| GENE 89 84195 - 84401 257 68 aa, chain - ## HITS:1 COG:no KEGG:NLA_14350 NR:ns ## KEGG: NLA_14350 # Name: not_defined # Def: hypothetical protein # Organism: N.lactamica # Pathway: not_defined # 1 66 22 87 89 90 66.0 2e-17 MNELLEVIKTESVGTVEETLDFFLYECSLDEAPTIEEVKLWRDELDKRGGKFIRLSAICQ KWLDEEIQ >gi|257257247|gb|ACDX02000006.1| GENE 90 84429 - 85007 580 192 aa, chain - ## HITS:1 COG:NMB0795 KEGG:ns NR:ns ## COG: NMB0795 COG0193 # Protein_GI_number: 15676693 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptidyl-tRNA hydrolase # Organism: Neisseria meningitidis MC58 # 1 192 1 192 192 321 83.0 7e-88 MSNKIKMIVGLGNPGSEYEQTRHNAGFWFIDELAWQYKATLKEEKKFFGSVARISISGSD LWLLKPATFMNRSGQAVATLAQFYKIKPEEILVVHDELDIPCGRIKFKLGGGNGGHNGLK DIQARLGTPDFYRLRLGIDHPGDRNLVVGYVLNKPSPEHRQQIDEAINKSLKAVPMLLAG EWEEAVRFLHSK >gi|257257247|gb|ACDX02000006.1| GENE 91 85074 - 85349 190 91 aa, chain - ## HITS:1 COG:NMA1005 KEGG:ns NR:ns ## COG: NMA1005 COG2914 # Protein_GI_number: 15793961 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 87 1 87 92 111 67.0 4e-25 MLEIEIVYGTAEKQILRSIRIEQGATARTAVLQSGLDKDFPELDLNTAPLGIFGKRVKDD VLLRDRDRIEIYRPLLIDPKEARRKRVGKTQ >gi|257257247|gb|ACDX02000006.1| GENE 92 85342 - 85773 537 143 aa, chain - ## HITS:1 COG:NMA1006 KEGG:ns NR:ns ## COG: NMA1006 COG2867 # Protein_GI_number: 15793962 # Func_class: I Lipid transport and metabolism # Function: Oligoketide cyclase/lipid transport protein # Organism: Neisseria meningitidis Z2491 # 1 143 5 147 147 249 84.0 1e-66 MKKVEKNVLVLHSAKQMFDLVDKVEDYPNFLPWYSKTEVIERKDKELKARLFMDYMGVRQ SFATHNHNIPGSEIRMDLLEGPFKTLRGTWKFIDLGGDMCKIEFRLEYDFSNMLLSTVIS PVFNHLSGTLVDAFVKEADRRYA >gi|257257247|gb|ACDX02000006.1| GENE 93 86001 - 87410 1208 469 aa, chain + ## HITS:1 COG:NMB1327 KEGG:ns NR:ns ## COG: NMB1327 COG0790 # Protein_GI_number: 15677193 # Func_class: R General function prediction only # Function: FOG: TPR repeat, SEL1 subfamily # Organism: Neisseria meningitidis MC58 # 1 467 1 466 467 390 50.0 1e-108 MNTADTFYREAISHLTRTPPDFEAAVPLLRQAAQAGHAESAFQLAGCLLQGLGISADRQA GIRLMQQAAGSGHPYARYNLLQIQESQGMPFNTLMAAYKELAEEGIIHAQLKLMRSLHDD GRHEEALQWAYMAAAQHHPQALYFLAQHHQYASPPDFAQAHLFYRQAAEQDFPAAHWQLG LQYKLGQGTDPNKQLAVVHLRHAADSGIAAAQTMLADLLLETDPQEAIHRLKAAARGGSS DAQVRLAEIYLLGKWVERNTGKAHVYAEKAAAQQHSEALRILGDIYRYGLGVVPDPIKAR RYYRQAADKGNIQAHQKLLADIALGNKPDEYAEAKEKALKKQEAEQLYQQAFAAHYGLNR HPDHLEALRLYERSALLGHGKAQTNLGMMYYNGHGTAQNYAKAAEWFEKAALNHDAMAQY NLACLYFNGTGIAHDADEACRWLEAAIRNGHDQPEVLKQLLAQWRQAAA >gi|257257247|gb|ACDX02000006.1| GENE 94 87750 - 88565 946 271 aa, chain - ## HITS:1 COG:NMA1721 KEGG:ns NR:ns ## COG: NMA1721 COG1562 # Protein_GI_number: 15794614 # Func_class: I Lipid transport and metabolism # Function: Phytoene/squalene synthetase # Organism: Neisseria meningitidis Z2491 # 1 270 7 276 276 424 75.0 1e-119 MSVNHYENFPVGSLVMPRRLRKPTHAVYAFARTADDLADEGNAEADERLRALDELKSELD RIQHGETPLTPLMQRLQREAIAPFKLPLQPFYDLLSAFSQDVVKTRYQDFGDLIDYCRRS ANPIGRIMLHLYGQTDEVSIAQSDGICTALQLINFWQDVAVDWQKGRVYIPQDDLEKFKV SEAQIAEGKADFAFQRLMSYECNRAFQMLKGGSPLGKTLKGRLGFELRMIIVGGQLILQK LDGCKYDVFMQRPVLDKKDWLIILKRAFLKK >gi|257257247|gb|ACDX02000006.1| GENE 95 88670 - 89233 757 187 aa, chain - ## HITS:1 COG:BS_ydeN KEGG:ns NR:ns ## COG: BS_ydeN COG3545 # Protein_GI_number: 16077593 # Func_class: R General function prediction only # Function: Predicted esterase of the alpha/beta hydrolase fold # Organism: Bacillus subtilis # 1 181 1 181 190 135 38.0 5e-32 MPRRVFIVHGFEGNPHGNWFDWLSAQVRAAGFQADALAMPNPERPTVSSWQFALDQHIGK PDENTFLVGHSLGCITLLHFLSRQQPEKIGGLVLAAGFADPLPPLPALDGYIKGAAPEFD ILRKIQMPKHCIVSDDDTHVPPELTLSMAEKLKSPVTHIAKGGHLMASDGFTELPQAWEV LKPMLTG >gi|257257247|gb|ACDX02000006.1| GENE 96 89448 - 89810 333 120 aa, chain + ## HITS:1 COG:NMA1264 KEGG:ns NR:ns ## COG: NMA1264 COG0239 # Protein_GI_number: 15794197 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Integral membrane protein possibly involved in chromosome condensation # Organism: Neisseria meningitidis Z2491 # 5 120 4 119 119 97 53.0 8e-21 MNFLNIFPVALGAVVGAVLRWILGLLLPAAPILGWGTLAANWIGALLIGFCAEWVADPQW RLLLITGFLGSLTTLSSFSLETVTMMQEGRWMAAALSVCLHVGGSFILTAAGIWLAHCLK >gi|257257247|gb|ACDX02000006.1| GENE 97 89916 - 90635 246 239 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 [Bacillus selenitireducens MLS10] # 17 239 6 225 234 99 33 9e-20 MEAGSRRRECMNRRHIALIPAAGIGARFGAGKPKQYIRIHGKTVLEHTVAIFTQHPLIDL VAIVVSPDDPFINHLQTTSDKTVIFNVGGDTRAETVRNGVQTLMEKRLADNHDNILVHDA ARCCLPQDALSRLIQEAGTKAEGGILAIPAADTIKRSATDGQILKTVPRTDLWQAQTPQL FQAGLLNRALSASDLNGITDEASAVEQLGIRPLLVQGDIRNLKLTLPQDEFIIRLLLNT >gi|257257247|gb|ACDX02000006.1| GENE 98 90602 - 91321 615 239 aa, chain - ## HITS:1 COG:NMB1514 KEGG:ns NR:ns ## COG: NMB1514 COG0847 # Protein_GI_number: 15677367 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, epsilon subunit and related 3'-5' exonucleases # Organism: Neisseria meningitidis MC58 # 3 234 4 234 244 377 81.0 1e-104 MRRQIILDTETTGLYAENGDRLVEFAGLEMVNRQMTGRFLHLYVHPQRDMPEEAARVHGL TIDVLEEKNAPPFAKVGQEISEFIRGAELIIHNAKFDVGFLNMEFRRMGLPSVEELGCEI TDTLAMAREMFPGQKASLDALCNRLSIDRSKRVLHGALIDCELLGEVYLAMTRQQFDLMG GESEEETKEDKPVIIAETKRSSSLKVIKANSEELEEHEKYLDALGEPCIWRQAAAGENV >gi|257257247|gb|ACDX02000006.1| GENE 99 91719 - 92201 329 160 aa, chain + ## HITS:1 COG:NMB0744 KEGG:ns NR:ns ## COG: NMB0744 COG3467 # Protein_GI_number: 15676642 # Func_class: R General function prediction only # Function: Predicted flavin-nucleotide-binding protein # Organism: Neisseria meningitidis MC58 # 1 160 1 159 159 159 46.0 2e-39 MPESIFKQVSLDILRLHQQTIRSLLATQCCNDCEVHDVFYITLDGRYYVWLPCMNKAEQV EAGILLIEDETSDIRLSWVANTREVQKKDSLYEKVVSALQRRLRQTKNKFIQAKDTCLLE LTPKQGRLTTGSRDLSLSPHDLMKALYPATHQLKSGGFAL >gi|257257247|gb|ACDX02000006.1| GENE 100 92371 - 92817 465 148 aa, chain + ## HITS:1 COG:no KEGG:NMCC_1263 NR:ns ## KEGG: NMCC_1263 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_053442 # Pathway: not_defined # 1 147 66 208 209 105 41.0 5e-22 MKMKLSALSVLAAAVLCSSGALAADDNVYTWKNGKGNSYSDTPNRLQLDRSNVMNIRTHS VKAVVKSKSEAADEGTLAEQQAKLNERMLAKNKLIEEQNKKIEEENRKNKEDNCRIARMN QQSAESARVANRDDLIKRYQGDVAKYCN >gi|257257247|gb|ACDX02000006.1| GENE 101 92901 - 93935 1027 344 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169632702|ref|YP_001706438.1| phosphoribosylaminoimidazole synthetase [Acinetobacter baumannii SDF] # 2 333 9 339 356 400 58 1e-110 MSTSLSYRDAGVDIDAGDQLVENIKPFAKRTMRPEVLGDLGGFGALVEISKKYKNPVLVS GTDGVGTKLKLAFDWDKHDTVGIDLVAMSVNDILVQGAEPLFFLDYFACGKLDVARATDV IKGIAQGCEESGCALIGGETAEMPGMYPEGEYDLAGFAVGVVEKERVVNGRSIKAGDIVL GLASNGAHSNGYSLVRKIIARDNPDLDAEFDNGKTLRETIIAPTRLYVKPILAALEKFTI KGMAHITGGGITENVPRILPENTVAQIDAKAWELPKLFQWLQQAGNVETQEMYRTFNCGI GMVVVIAEEDADAVQAFLTEQGETVYRLGKIRERNGDEHQTQVA >gi|257257247|gb|ACDX02000006.1| GENE 102 94141 - 95211 1620 356 aa, chain + ## HITS:1 COG:NMA1381 KEGG:ns NR:ns ## COG: NMA1381 COG0628 # Protein_GI_number: 15794302 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Neisseria meningitidis Z2491 # 1 356 1 356 356 451 75.0 1e-126 MYQKKTRGMKPWIIMGCVIAAFVWLLYALGDILTPFIVAAVLAYVLNPLVEWLQKKRIKR APASMIVMVLALLLLLSLMLIIVPMLINQFNNMVSRIPQIVDFTQNKLLPWLNNAAGDYM QIDQESVIAWLQSHTGELSNTLKAWMPTLMRQSGNVISGMSNLILLPLLLYYFLLDWKRW SYGISALVPRRFIDTYTRITSNMDEVLGEFLRGQLMVMLIMGLVYGVGLMLVGLDSGFAI GMIAGILVFIPYLGAFTGLLLATVAALLQFSTWNGLIMVWVVFAIGQFLESFIVTPKIVG DRIGLSPFWVIFSLMAFGQLMGFVGMLAGLPLAAVTLVLLREGVNAYFHSRFYKHK >gi|257257247|gb|ACDX02000006.1| GENE 103 95477 - 96193 1037 238 aa, chain + ## HITS:1 COG:PA3004 KEGG:ns NR:ns ## COG: PA3004 COG0005 # Protein_GI_number: 15598200 # Func_class: F Nucleotide transport and metabolism # Function: Purine nucleoside phosphorylase # Organism: Pseudomonas aeruginosa # 3 236 5 240 245 201 44.0 1e-51 MLAIIGGSSLTKLPELSITDRKIVRTPYGLTSSPVLSGKLGSQDIIFLARHGFGHTVAPH EINYRANIWALHSIGAEYIVAVSSVISINDRFETGALVLPDDLIDYTYGRKDTFFEGQEE PVVHTDFLHPYTAELREKIVEHAQQHQMPLYTQAVYGCLQGPRWPTRAEIQRYRRDGVDV LGMTGMPEAVLARELGIKYAHFCGITNIRCLSGEATDTGCDLETELAVEKIRRLLAGL >gi|257257247|gb|ACDX02000006.1| GENE 104 96441 - 98717 2943 758 aa, chain - ## HITS:1 COG:NMA1140 KEGG:ns NR:ns ## COG: NMA1140 COG0620 # Protein_GI_number: 15794086 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase II (cobalamin-independent) # Organism: Neisseria meningitidis Z2491 # 1 758 1 758 758 1492 98.0 0 MTTLHFSGFPRVGAFRELKFAQEKYWRKEISEQELLDVAKDLREKNWKHQAAANADFVAV GDFTFYDHILDLQVATGAIPARFGFDSQNLSLEQFFQLARGNKDQFAIEMTKWFDTNYHY LVPEFHADTEFKANAKHYVQQLKEAQALGLKAKPTIVGPLTFLWVGKEKGAVEFDRLSLL QKLLPVYIEILNALVEAGAEWIQIDEPALAVDLPKEWVEAYKDVYATLSKVNAKILLSTY FGSVAEHAALLKALPVDGLHIDLVRAPEQLDAFADYDKVLSAGVIDGRNIWRANLNKVLE TVEPLKAKLGDRLWISSSCSLLHTPFDLSVEEKLKANKPDLYSWLAFTLQKTQELRVLKA ALNEGRDSVAKELAASQAAADSRANSSEIHRADVAKRLTDLPANADQRKSPFADRIKAQQ AWLNLPLLPTTNIGSFPQTTEIRQARAAFKKGELSAADYEAAMKKEIALVVEEQEKLDLD VLVHGEAERNDMVEYFGELLSGFAFTQYGWVQSYGSRCVKPPIIFGDVSRPEAMTVAWST YAQSLTKRPMKGMLTGPVTILQWSFVRNDIPRATVCKQIALALNDEVLDLEKAGIKVIQI DEPAIREGLPLKRADWDAYLNWAGESFRLSSTGCEDSTQIHTHMCYSEFNDILPAIAAMD ADVITIETSRSDMELLTAFGEFKYPNDIGPGVYDIHSPRVPTEAEVEHLLRKAIEVVPVE RLWVNPDCGLKTRGWKETLEQLQVMMNVTHKLRAELAK >gi|257257247|gb|ACDX02000006.1| GENE 105 98856 - 99734 1386 292 aa, chain - ## HITS:1 COG:NMA1139 KEGG:ns NR:ns ## COG: NMA1139 COG0685 # Protein_GI_number: 15794085 # Func_class: E Amino acid transport and metabolism # Function: 5,10-methylenetetrahydrofolate reductase # Organism: Neisseria meningitidis Z2491 # 1 292 1 292 292 596 98.0 1e-170 MSYAKEINALNNSLSDLKGDINVSFEFFPPKNEQMETMLWDSIHRLQTLHPKFVSVTYGA NSGERDRTHSIVKRIKQETGLEAAPHLTGIDASPDELRQIAKDYWDSGIRRIVALRGDEP PGYEKKPFYAEDLVKLLRSVADFDISVAAYPEVHPEAKSAQADLINLKRKIDAGANHVIT QFFFDVERYLRFRDRCVMLGIDVEIVPGILPVTNFKQLGKMAQVTNVKIPKWLSQMYEGL DNDQATRNLVAASIAIDMVKVLSREGVKDFHFYTLNRSELTYAICHILGVRP >gi|257257247|gb|ACDX02000006.1| GENE 106 100077 - 100274 365 65 aa, chain - ## HITS:1 COG:NMA1347 KEGG:ns NR:ns ## COG: NMA1347 COG2975 # Protein_GI_number: 15794269 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 65 1 65 65 110 92.0 7e-25 MKWTDTQRIAEELYDLHGDSIDPKTVRFTQLRDLIMALPDFDDDPARCGERILEAVQQAW IEEAE >gi|257257247|gb|ACDX02000006.1| GENE 107 100607 - 101215 765 202 aa, chain + ## HITS:1 COG:no KEGG:NMC1074 NR:ns ## KEGG: NMC1074 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 196 1 189 195 127 39.0 4e-28 MNNTLNAKLSKLIYALASDDPNYLAKAGVFDRLLLLIRELYQMLDDSEGLNRLSLRLRYG KRYGMIALDAAATGEDAGALRLKRWMVYSRIAERIVGCGNDLSVALDDMVVENEEAKQRY MDAANEIIKRFGLAGYVPEPPKSVTAEQNEPAPKPEPKSIISRRGSSLSMLNVKGEVERY PVAQAASSMKISRLKFVVSRSK >gi|257257247|gb|ACDX02000006.1| GENE 108 101351 - 101692 627 113 aa, chain - ## HITS:1 COG:NMA1344 KEGG:ns NR:ns ## COG: NMA1344 COG0633 # Protein_GI_number: 15794267 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Neisseria meningitidis Z2491 # 1 113 1 113 113 194 92.0 5e-50 MPKITVLPHAVLCPEGAVIEDAPEGKTVLDVLLDHDIEVDHACEKSCACTTCHVIIRQGF DSLEEPTELEEDLLDQAWGLEADSRLSCQAVVADEDLVVEIPKYTINHAREDH >gi|257257247|gb|ACDX02000006.1| GENE 109 101778 - 102140 448 120 aa, chain - ## HITS:1 COG:no KEGG:SSA_1320 NR:ns ## KEGG: SSA_1320 # Name: not_defined # Def: hypothetical protein # Organism: S.sanguinis # Pathway: not_defined # 1 118 1 118 121 169 72.0 3e-41 MRLWHQTLIPLLPRAQLLGQHRECAALRGAGWGRPHATVNYVFTHSPDKLYLYHALIMEE MEKRGYKPDSLWKDPLYRGKAVAPYPAHDIQAADSPIYPEHDDAYLDECLENLKSKGIML >gi|257257247|gb|ACDX02000006.1| GENE 110 102223 - 104085 2927 620 aa, chain - ## HITS:1 COG:NMA1340 KEGG:ns NR:ns ## COG: NMA1340 COG0443 # Protein_GI_number: 15794264 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Neisseria meningitidis Z2491 # 1 620 1 620 620 989 89.0 0 MALLQISEPGMSAAPHQHRLAVGIDLGTTNSLVATVRSGSPVCLTDIDGRTTLPSVVRYG EGDAVEVGKTALSAQKTDPLNTVSSAKRLIGRTLTDLAHEAQYLPYRFTPNERVVELNTR QGAKTPIEVSSEILKALKSRAEETLGGDLVGAVITVPAYFDDAQRQATKDAARLAGLNVL RLLNEPTAAAIAYGLDNASEGTFVVYDLGGGTFDVSVLQLTKGLFEVKATGGNSALGGDD FDHRLFCHLLEQNDLSKLNERDSQLLLSLVRTAKEQLTNQTEAVVEATLSDDRKIHTVIT RQEFHHLTQNLVQKTIEPVKQALKDAGVTKADIKGVIMVGGSTRMLHVQQAVATFFGQTP LNNLNPDEVVALGAAIQANVLAGNKTDGEWLLLDVTPLSLGLETYGGLAEKIIPRNSTIP TARAQDFTTFKDGQTAMTIHVVQGERELVSDCRSLAKFTLRGIPPMAAGAARIRVTFQVD ADGLLSVSAQEQSTGVQAQIEVKPSYGLDDDTITQMLKDSMSNAAEDMAARARAEAVVEA ESLTDAVNAALELDSDLLNAEELAQIQQDIADLQGRLKDGNAEDIRAAVAKLSRSTDNFA AKRMNRNIQRALTGQSVDNI >gi|257257247|gb|ACDX02000006.1| GENE 111 104282 - 105130 498 282 aa, chain + ## HITS:1 COG:NMB1130 KEGG:ns NR:ns ## COG: NMB1130 COG1562 # Protein_GI_number: 15677007 # Func_class: I Lipid transport and metabolism # Function: Phytoene/squalene synthetase # Organism: Neisseria meningitidis MC58 # 1 282 1 282 290 533 90.0 1e-151 MQGLDYCRQKAEESRSSFLSGFRFLPQEKRDAITVLYAFCRELDDVVDDCSDPNVAQATL NWWRGDLNKVFGGVMPEHPVNQALRQVKETFKLPKYELEALIDGMQMDLVQARYGSFEEL KLYCHRVAGVVGCLIARILGFSDDRTLEYADKMGLALQLTNIIRDVGEDARNGRIYLPME EMQQFDIPASVIMRCKPTDNFAELMRFQVSRARETYREAMSLLPAADKKSQKVGLVMAAI YYALLNEIDRDGAQNVLTYKIAIPSPRKKRIALKTWLFGFKP >gi|257257247|gb|ACDX02000006.1| GENE 112 105127 - 106440 836 437 aa, chain + ## HITS:1 COG:NMA1338 KEGG:ns NR:ns ## COG: NMA1338 COG2907 # Protein_GI_number: 15794262 # Func_class: R General function prediction only # Function: Predicted NAD/FAD-binding protein # Organism: Neisseria meningitidis Z2491 # 1 431 2 430 437 619 72.0 1e-177 MNTPHLRPKIAVVGAGWAGLSAAVSLARRADVTVFEAGRQAGGRARALIGNADRFSFLDN GQHILLGAYHSVLALMEHIGVDPEAAFCRLPLQWHMYEGLQFQSTNLPSPLHILTGILRA KNISFSLKIKLLSDMGALQRYARGKRTDLPVAQWLRQRNVPRRLVAEFWQPLVWGALNTP LEHASLRVLCNVLSDGVWADKSGSDYLLPKRDLGAIIAEPTLAKLKQFGADIRLETRVGR LKNLPDGRIVVNDEAFDAVIVATAPYHAAHLFPEETPDYIQTTYQNLRYHSITTVYLRYA VPVHLPTPLTGFADGAAQWLVYRGALGLPTNEVAAVISVSDHVGAFKSQEWAEKVHADVK RICPYLDEPEAVRVITEKRATTACTPDSSPPDFAWLHQRRIYPAGDYLHPRYPATLEAAV QSGLTAAERCLADFGLI >gi|257257247|gb|ACDX02000006.1| GENE 113 106557 - 107276 908 239 aa, chain + ## HITS:1 COG:NMB1127 KEGG:ns NR:ns ## COG: NMB1127 COG1028 # Protein_GI_number: 15677004 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Neisseria meningitidis MC58 # 1 239 1 239 239 429 92.0 1e-120 MPTLQNKTILVTGASQGLGEQVAKAYAEAGATVILVARHQKKLEKVYDAIVEAGCPEPFA ICFDLIGAEEKEFEQFAATIGEAIQGKLDGIVHCASYFYALSPLDFQTVAEWVNQYRINT VAPMGLTRALLPLLKQSPDASVIFVGESHGETPKAYWGGFGASKAALNYLCKVAADEWER FENLRANVLVPGPINSPQRIKSHPGESKSERKNYEDVLPQFVWWASEESRGRSGEIVYL >gi|257257247|gb|ACDX02000006.1| GENE 114 107473 - 107967 164 164 aa, chain + ## HITS:1 COG:no KEGG:NMB0488 NR:ns ## KEGG: NMB0488 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis # Pathway: not_defined # 1 164 1 164 164 329 95.0 3e-89 MTFNQEQDYWAGYKANERALIIQTWSGFGRYAPDHPYPPHILPLDTDNETLGTTVLQALA NSRTFVYDSSEDQDFFDAEKFRQRYEDWVANLCGNLGYKTRRALFKNMMSGDIWLHNGCL KISPSRHVKLEAWDAIDADDVILSLDNSPEEIGAGLKLVLSRCR >gi|257257247|gb|ACDX02000006.1| GENE 115 108126 - 108752 323 208 aa, chain + ## HITS:1 COG:no KEGG:PA2459 NR:ns ## KEGG: PA2459 # Name: not_defined # Def: hypothetical protein # Organism: P.aeruginosa # Pathway: not_defined # 11 208 7 198 201 130 37.0 3e-29 MEKIEKFKSELLDNIFEYIQCISIFVYKRNIYYLIDYKENFELDAKISFDIYLKEGVITK EQYDCDYKNYRNGIWQLTKDNFESYLQSDSVVVLEKDELKALMLQGFTSDEAVRLYSVVE NKLSYNEPISDSGQQSDFLKINQISSRLPLFYINFDTEVYLHMDWDRCHEDYVYDGWFSK AMDFGYLIPDEFCYWKIEGRDYWKFRQL >gi|257257247|gb|ACDX02000006.1| GENE 116 108896 - 111070 2939 724 aa, chain - ## HITS:1 COG:NMB1281 KEGG:ns NR:ns ## COG: NMB1281 COG1197 # Protein_GI_number: 15677148 # Func_class: L Replication, recombination and repair; K Transcription # Function: Transcription-repair coupling factor (superfamily II helicase) # Organism: Neisseria meningitidis MC58 # 1 724 656 1379 1379 1372 96.0 0 MGEGWGEGKAVAAQSAIAVITESELYQYVARSRAHNRRKKHAAVSDGLLRDLAEINIGDP VVHEEHGIGRYMGLVTMDLGGETNEMMLLEYAGEAQLYVPVSQLHLISRYSGQAHENVAL HKLGSGAWNKAKRKAAEKARDTAAELLNLYAQRAAQSGHKFEINELDYQAFADGFGYEET EDQAAAIAAVIKDLTQAKPMDRLVCGDVGFGKTEVALRAAFVAVMGGKQVAVLAPTTLLV EQHAQNFADRFADFPVKVASLSRFNNSKATKSALEGMADGTVDIVIGTHKLVQDDIKFKN LGLVIIDEEHRFGVRQKEQLKRLRANVDILTMTATPIPRTLSMALEGLRDFSLITTAPSR RLAVKTFVKPFSEGSVREAVLRELKRGGQVFFLHNEVDTIENMRERLETLLPEARIGVAH GQLRERELEQVMRDFLQQRFNVLLCSTIIETGIDIPNANTIIINRADKFGLAQLHQLRGR VGRSHHQAYAYLLTPEYITKDAEKRLDAIAAADELGAGFTLAMQDLEIRGAGEILGEGQS GEMIQVGFTLYTEMLKQAVRDLKKGRQPDLDAPLGITTEIKLHSPALLPESYCPDIHERL VLYKRLAVCETVQQINAIHEELVDRFGLPEQPVKTLIESHHLRLAAKELGIDAIDATGEA VTVTFGKNNNVDPTEIILLIQTDKKYRLAGADKLKFTAQMEDVEARIKMVKSVLKTLKER VVAK >gi|257257247|gb|ACDX02000006.1| GENE 117 111198 - 112787 1177 529 aa, chain - ## HITS:1 COG:NMA1491 KEGG:ns NR:ns ## COG: NMA1491 COG1197 # Protein_GI_number: 15794391 # Func_class: L Replication, recombination and repair; K Transcription # Function: Transcription-repair coupling factor (superfamily II helicase) # Organism: Neisseria meningitidis Z2491 # 1 513 1 513 1296 989 94.0 0 MTYPIPKPREKSRWLNLSQGSLPLALARYLPHKRLKVVLTQDAEQALRLQTAWRFFRPHD TAVFLPDWETLPYERFSPHQDLVSERLSALWQIKSGAADVLFVPVATAMQKLPPVPFLAG RTFWLKTGQTLDIGRLKTDLVDAGYNHVSHVVAAGEFAVRGGIVDLFPMGSEMPYRIDLF DDEIDSIKTFDTETQRTISPVSEIRLLPAHEFPTDSEAQKIFRSRFREEVDGNPNDAAVY KAVSNGYFGAGVEYYLPLFFENELETLFDYIGEDALFVSLGDVHAEANRFWSDVKSRYAM AQGDETYPPLLPQHLYLSADVFAGRLKNYGQVLPDVSGKEHTLPDLAVNRQSDEPLQALK DFQTTFGGRILLCAESLGRRETMLGFLQQNGLKAKPVSDWQGFLSAHEPLMITVAPLAYG FKLGGLQSPSQQQPTPASEGEGKAVADQTEFSTAATTPLPSPLPQEREQNAAAVSDDLKT ESSLHPVESTLHGQTRQQPAPSPVGEGLGRGQSSCRSNRIFRSRNKSSP >gi|257257247|gb|ACDX02000006.1| GENE 118 112932 - 113663 919 243 aa, chain - ## HITS:1 COG:NMB0933_2 KEGG:ns NR:ns ## COG: NMB0933_2 COG0590 # Protein_GI_number: 15676827 # Func_class: F Nucleotide transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: Cytosine/adenosine deaminases # Organism: Neisseria meningitidis MC58 # 94 241 4 151 152 219 72.0 4e-57 MPTLLTTPPVAPQTLAALQALGIRSVEELRDTGSVQAFLLLKAAGLTVTRSTLWQLEALL LGIKPQELPQTQKTALEQAVKNHPPVAVFPTSFEMETFMRAALVQAEQSARIGEIPVGAV VVADNQIIAAAHNTCVSDHDISRHAEIRALAVAGAALQNYRLDECDLYITLEPCAMCASA IIQARVRRVIYGAAEPKTGAAGSVVNLFANPLLNKHTAIKGGILEDECKDVLQAFFQTRR KQG >gi|257257247|gb|ACDX02000006.1| GENE 119 113670 - 114611 1185 313 aa, chain - ## HITS:1 COG:NMA1130 KEGG:ns NR:ns ## COG: NMA1130 COG0324 # Protein_GI_number: 15794076 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA delta(2)-isopentenylpyrophosphate transferase # Organism: Neisseria meningitidis Z2491 # 1 313 1 313 313 437 70.0 1e-122 MNTPKAFAILGPTAGGKTALALKIAEALPVEIISLDSALVYRDMDIGTAKPTAAELDAVP HHLIDIIPPTESYSAAEFVGDCVRLAEEVRARGRLPLIVGGTMMYFHALTEGLNDLPEAD AAVRAELQEEKNRYGLAHLYQNLQTIDPETAGRLKPNDSQRIERALEVYRLTGKPLSAHF AEKADYTPPLDLCTTALIPENRALLHENIARRFTQMLEQGFINEMRALRQKYPELTADMP SMRCVGYRQAWDYLEGLTDYDTFVEKGIAATRQLAKRQLTWLRKIPLAHSIDPYTDGDHI QTTLALVRRHFQI >gi|257257247|gb|ACDX02000006.1| GENE 120 114735 - 116033 1636 432 aa, chain - ## HITS:1 COG:NMB1432 KEGG:ns NR:ns ## COG: NMB1432 COG0128 # Protein_GI_number: 15677291 # Func_class: E Amino acid transport and metabolism # Function: 5-enolpyruvylshikimate-3-phosphate synthase # Organism: Neisseria meningitidis MC58 # 1 430 1 430 433 818 95.0 0 MTESIRLPAASLKPATVALPGSKSISNRTLLLAALSDNTCEIHSLLKSDDTDRMLEALDK LGVEIEYLAEGRLKVHGTGGRFPNRTANLFLGNAGTAFRPLTAALAVLGGDYHLHGVARM HERPIGDLVDALRIAGADVEYLGNEHYPPLHIGERQDRGERVIPIKGNVSSQFLTALLMA LPLTGQAFEIRMVGELISKPYIDITLKLMAQFGVQVANEDYRVFKIPADARYHAPEHLHV EGDASSASYFLAAGLIAATPVRVTGIGANSIQGDVAFARELEKIGADVVWGENFVEVSRP KEHTVQAFDLDANHIPDAAMTLAIVALASGQTCTLHNIGSWRVKETDRIAAMANELRKLG AKVVEEAEAIHITPPETLTPDAVIDTYDDHRMAMCFSLVSLLGVPVVINDPKCTHKTFPT YFEVFSSLTDAV >gi|257257247|gb|ACDX02000006.1| GENE 121 116263 - 117738 2155 491 aa, chain + ## HITS:1 COG:NMA1247 KEGG:ns NR:ns ## COG: NMA1247 COG0147 # Protein_GI_number: 15794182 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component I # Organism: Neisseria meningitidis Z2491 # 1 491 1 491 491 999 98.0 0 MISKQEYQAQAAQGYNRIPLVQELLADLDTPLSLYLKLANRPYTYLLESVVGGERFGRYS FIGLPCSHYLKASGKHVDVYQNGEIVEQHDGNPLPFIEAFHNRFKTPEIPSLPRFTGGLV GYFGYETIYNFEHFAHRLKNTAKADPLGTPDILLMLSQELAVIDNLSGKIHLIVYADPSQ PDGYERARERLEDIRTQLRQSCAIPLSLGSKHTEAVSEFGEEPFKACVDKIKDYIFAGDC MQVVPSQRMSMEFTDSPLALYRALRTLNPSPYLFYYDFGDFHIVGSSPEILVRRERDDVI VRPIAGTRLRGKTPAEDLANEQDLLSDAKEIAEHVMLIDLGRNDVGRISKTGEVKVTDKM VIEKYSHVMHIVSNVEGRLKEGVTNMDILAATFPAGTLSGAPKVRAMEIIEEVEPSKRGI YGGAVGVWGFNNDMDLAIAIRTAVVKNNTLYVQSGAGIVADSDPTSEWQETQNKARAVVR AAQMVQEGLDR >gi|257257247|gb|ACDX02000006.1| GENE 122 117964 - 118251 237 95 aa, chain + ## HITS:1 COG:NMB0047 KEGG:ns NR:ns ## COG: NMB0047 COG2827 # Protein_GI_number: 15675987 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease containing a URI domain # Organism: Neisseria meningitidis MC58 # 1 94 1 94 94 135 76.0 1e-32 MQPAVYILTSQQNGTLYIGVTSNLIQRVYQHREYLAQGFTNQHHVTLLVWYELHSTMEYA ITREKQLKKWNRQWKLRLIEEKNPGWEDLWFEIIK >gi|257257247|gb|ACDX02000006.1| GENE 123 118461 - 119597 1249 378 aa, chain + ## HITS:1 COG:NMB1019 KEGG:ns NR:ns ## COG: NMB1019 COG0026 # Protein_GI_number: 15676907 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) # Organism: Neisseria meningitidis MC58 # 1 378 1 378 378 671 91.0 0 MNKSPILPPSMLGILGGGQLGRMFAVAAKTMGYKVTVLDPDPNAPAAEFADRHLCAPFDD QAALDELAKCAAVTTEFENVNADAMRFLAKHTNVSPSGDCVAIAQNRIQEKAWIRKAGLQ TAPYQVVCRSDDISEESAQFLPGILKTATLGYDGKGQIRVKTVDELKAAFAEHGGVDCVL EKMVDLRGEISVIVCRLNDENVQTFDPAENIHENGILAYSIVPARLSADVQQQARQMAQR LADELDYVGVLAVEIFVVGDTHELVVNEIAPRPHNSGHHTLDACAADQFQQQVRIMCNLP PADTKLLSSCCMANILGDVWQEDGGEPNWLPLQTHPNAHLHLYGKKAARKGRKMGHFTVL ASDADTAFEVAVKLHQSL >gi|257257247|gb|ACDX02000006.1| GENE 124 119677 - 120159 530 160 aa, chain + ## HITS:1 COG:NMB1018 KEGG:ns NR:ns ## COG: NMB1018 COG0454 # Protein_GI_number: 15676906 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Neisseria meningitidis MC58 # 1 160 1 160 160 243 72.0 1e-64 MSLLTILRPATVQDCQAIHNAHLHAAQFACIRSYDENVLQAWEALLDTESYCHTIDDPDK ALWVVEYKGAIRGFFQVDFKEAQLDALYVHPIFHNQGLGTALLRRAEELAHHAGLSFLKL YASLNSVPFYRINRYESLGSAVLQLNREVKVECELMRKYL >gi|257257247|gb|ACDX02000006.1| GENE 125 120254 - 120871 491 205 aa, chain + ## HITS:1 COG:NMA1237 KEGG:ns NR:ns ## COG: NMA1237 COG2840 # Protein_GI_number: 15794177 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 200 1 196 201 273 72.0 2e-73 MKTDFQSTLQALGKQAKKEAEEKAVAEAAAKKQEAENADFASMVGTVTPLKQTSQYYSAP RDKSPIKPRPKEVSSLDEEDYFYIGSGGWDEPPASFSKNGQGKNDLQRLRNGHYPVVADV DLHGYTQEEAQQVLNEFIVFVQKRGVCAEIVHGSGLGSAGYKPVLKNMTRRWLMQHPDVL AYIEPREGNDGAVRILIKRRHLEEG >gi|257257247|gb|ACDX02000006.1| GENE 126 121253 - 123916 3435 887 aa, chain + ## HITS:1 COG:NMB1341 KEGG:ns NR:ns ## COG: NMB1341 COG2609 # Protein_GI_number: 15677207 # Func_class: C Energy production and conversion # Function: Pyruvate dehydrogenase complex, dehydrogenase (E1) component # Organism: Neisseria meningitidis MC58 # 1 887 1 887 887 1790 97.0 0 MSTQLHDVDPIETQEWLDALSSVLEYEGSERAQYLLEHLVKYSRDKGVRMPHGTTTPYLN TVSVEDEKGIPGDQNIEHRIRAFVRWNAAAIVLRAGKKDLELGGHIASFQSAATMYEVGF NHFWKAKGEGEEGDLVFFQGHVSPGIYARAFVEGRLTEDQLNNFRQEVDGHGLPSYPHPH LLPDFWQFPTVSMGLGPIMAIYQARFLKYLESRGLVKTKGRKVWCFCGDGEMDEPESQGA IALAAREGLDNLIFVINCNLQRLDGPVRGNGKIIQELEGNFAGAGWNVVKVIWGRRWDRL LAKDKDGILRKRMEECLDGDYQTYKSKDGAYVREHFFNTPELKALVADMTDEQIWALNRG GHDPQKVYNAYDLAANHADGKPTVILAKTIKGYGMGASGEGQNVAHQAKKMDKASLKQFR DRFDIPVTDEQIDSGDLPYLTFAPDSEEYKYLHARREALGGYLPQRHPTKEVLEVPELSA FDAQLKSSGDREFSTTMAFVRILSTLLKDKKIGKRVVPIVPDESRTFGMEGMFRQYGIWN PKGQQYTPQDKDQLMFYKESVDGQILQEGINEPGAMADWIAAATSYANSDFAMIPFYIYY SMFGFQRIGDLAWAAGDMHARGFLLGGTAGRTTLNGEGLQHEDGHSHIQADLIPNCVSYD PTFQYEVAVIVQDGLRRMYANNEDVFYYITLMNENYAHPDMPEGAEQDILKGMYLLKAGG KGDKKVQLMGSGTILQEVIAGAELLKADFGVEADIWSCPSFNLLHRDAIEAERFNRLHPL EAEKVPFVTSQLQGHDGPVIAATDYIRSYADRIRAYIPNDYHVLGTDGFGRSDSRANLRR FFEVDRYNVAVAALSALSEQGKVSKETVQQAIEKYGINADVAPSWKR >gi|257257247|gb|ACDX02000006.1| GENE 127 124157 - 125776 2348 539 aa, chain + ## HITS:1 COG:NMA1555 KEGG:ns NR:ns ## COG: NMA1555 COG0508 # Protein_GI_number: 15794448 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes # Organism: Neisseria meningitidis Z2491 # 1 539 1 535 535 810 93.0 0 MSIVEIKVPDIGGHENVDIIAVEVKAGDTIAVDDTLITLETDKATMDVPADAAGIVKEVK VKVGDKISEGGVILTVETGAAAAEAAPAPAAEAQPAPAAAPAAAPAGGATVQVAVPDIGG HTDVDVIAVEIKVGDTVAEDDTLITLETDKATMDVPCTAAGVVKAVFLKVGDKVSEGTAI IEVETAGSAAAPAPAPAQAAAPAAAPAPAAAPAAAPAPVAAPAPAAAKIDEAAFAKAHAG PSARKLARELGVDLGQVKGTGLKGRIMGDDIKAFVKSVMQGGAAKPAAAGASLGGGLDLL PWPKVDFSKFGNVEVKELSRIKKISGQNLSRNWVVIPHVTVHEEADMTELEEFRKQLNKE WEREGVKLSPLAFIIKASVSALKAFPEFNASLDGDNLVLKNYFNIGFAADTPNGLVVPVI KDVDQKGLKEISQELTELSKKAREGKLKPQEMQGACFTISSLGGIGGTGFTPIVNAPEVA ILGVCKSQIKPVWDGKEFAPRLMCPLSLSFDHRVIDGAAGMRFTVFLANLLKDFRRITL >gi|257257247|gb|ACDX02000006.1| GENE 128 125864 - 127681 677 605 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 117 582 2 451 458 265 34 9e-70 MSLVELKVPDIGGHENVDIIAVEVNVGDTIAVDDTLITLETDKATMDVPAEVAGVVKEVK VKVGDKISEGGLIVVVEAEGAAAAPKAEAPAAAPAQEAPKAAAPAPQAAQFGGSADAEYD VVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRH LAANGIKYPEPELDIDMLRGYKEGVVSRLTTGLAGMAKGRKVDVIQGDGQFLDPHHLEVS LTTGDVYEQATPTGEKKIVAFKNCIIAAGSRVTKLPFIPEDPRIIDSSGALALKEVPGKL LIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQGADRDLVKVWQKQNEYRFDNIMINTK TVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNGKLISAEKAGVAVTDRGFIEI DKQMRTNVPHIYAIGDIVGQPMLAHKAVHEGHVAAENCAGHKAYFDARVIPGVAYTAPEV AWVGETELSAKASGRKITKANFPWAASGRAIANGCDNGFTKLIFDAETGRIIGGGIVGPN GGDMIGEICLAIEMGCDAADIGKTIHPHPTLGESIGMAAEVALGTCTDLPAQKKNKCIQS VELNC >gi|257257247|gb|ACDX02000006.1| GENE 129 128119 - 128826 924 235 aa, chain + ## HITS:1 COG:NMA1542 KEGG:ns NR:ns ## COG: NMA1542 COG0220 # Protein_GI_number: 15794435 # Func_class: R General function prediction only # Function: Predicted S-adenosylmethionine-dependent methyltransferase # Organism: Neisseria meningitidis Z2491 # 13 234 16 237 238 401 85.0 1e-112 MNEITPDSTVPEEHKRSIRSFVLRQGHMTAAQQRAIDTMWPQFGIDYQDSVLDLNQRFGS DRPKVLEIGFGMGVATVEIAKRLPDTDFLAIDVHGPGVGNILKLIEEEHIGNIRVMRHDA VEVVENMLSDDVLDGIHIFFPDPWHKKRHNKRRLVQTPFVQKLLPKLKVGGYIHLATDWE EYAQQMLEVLSGFENLQNTAADYAPTPDYRPETKFEARGKRLGHGVWDLVFKRIK >gi|257257247|gb|ACDX02000006.1| GENE 130 128846 - 129475 837 209 aa, chain + ## HITS:1 COG:NMA1416 KEGG:ns NR:ns ## COG: NMA1416 COG0307 # Protein_GI_number: 15794328 # Func_class: H Coenzyme transport and metabolism # Function: Riboflavin synthase alpha chain # Organism: Neisseria meningitidis Z2491 # 1 202 16 217 220 306 74.0 2e-83 MFTGIVQGIGEIIAIREPSADFRTHVVKLPDGMTEHLQIGASVANNGCCLTITQIDSDTV SFDLMKETLEKTNLGRLKTGDAVNLERAARFGDEIGGHVMSGHIMTTTRITRIERSEFNR TVWFALPPELKPYILSKGFVGLDGCSLTIGDVTDTEFNVHLIPETLTRTLFGSRKEGDVI NIEIDPQTQAVVDTVMRVMAQQNPATSGQ >gi|257257247|gb|ACDX02000006.1| GENE 131 129484 - 130350 717 288 aa, chain + ## HITS:1 COG:NMA1415 KEGG:ns NR:ns ## COG: NMA1415 COG2607 # Protein_GI_number: 15794327 # Func_class: R General function prediction only # Function: Predicted ATPase (AAA+ superfamily) # Organism: Neisseria meningitidis Z2491 # 1 287 1 287 287 497 83.0 1e-140 MKLAAFLQKAYSVLNRLDLVLPEEPGKTDWNALAYRWHSVGKKGILESLPNPHTFPLNRL AAVGAQTEKLKRNTEQFLAGRSANNVLMSGSRGTGKSSLVKALLHEYAGQGLRLIEVDKS DLVSLPALLSLLKDRPEKFIVFCDDLSFETGDETYKALKTALDGGLSQRCSNVLVYATSN RRHLMPEYMDENGGTTGICGEIHQKEAVEEKISLSDRFGLWLSFYPFDQNDYLQAVENWL DDFGVDFDETARKAALQWAQMRGNRSGRSAWQFACDWAGRLPEQRILD >gi|257257247|gb|ACDX02000006.1| GENE 132 130528 - 130899 314 123 aa, chain - ## HITS:1 COG:NMA1414 KEGG:ns NR:ns ## COG: NMA1414 COG3678 # Protein_GI_number: 15794326 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; N Cell motility; T Signal transduction mechanisms; P Inorganic ion transport and metabolism # Function: P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein # Organism: Neisseria meningitidis Z2491 # 6 123 27 144 144 149 58.0 2e-36 MAVNPTHAGPQYIKLDDFQANCDIRSLNLTQDQHNALRRIRNDYKQASDKAYRKLVRTDR NRRQVIMKILAADNFDQNNARDYVETRYLSSMDFAVEELEIQHRFYHLLNPRQRQLWLSS CLR >gi|257257247|gb|ACDX02000006.1| GENE 133 131212 - 131895 740 227 aa, chain + ## HITS:1 COG:NMB1244 KEGG:ns NR:ns ## COG: NMB1244 COG0036 # Protein_GI_number: 15677116 # Func_class: G Carbohydrate transport and metabolism # Function: Pentose-5-phosphate-3-epimerase # Organism: Neisseria meningitidis MC58 # 5 227 4 226 242 400 90.0 1e-112 MNQKFRIAPSILSADFARLGEEVTKVIEAGADLIHFDVMDNHYVPNLTFGPMVCAALKPY ATVPIDVHLMVEPVDDLIQAFAKAGASIITFHPEASHHIDRSLSLIKDAGCQAGLVLNPA TPTYVLENVLDRLDMVLLMSVNPGFGGQSFIPHTLEKIRQVRTMLDQYEAQSGRHIAIEV DGGIKTDNIAAVAAAGADTFVAGSAIFGKPDYKAVITEMRGQLAQLG >gi|257257247|gb|ACDX02000006.1| GENE 134 131983 - 132303 139 106 aa, chain + ## HITS:1 COG:no KEGG:NLA_13430 NR:ns ## KEGG: NLA_13430 # Name: not_defined # Def: hypothetical protein # Organism: N.lactamica # Pathway: not_defined # 8 106 2 100 100 140 66.0 2e-32 MKNYWFQKSLKFVAVAVFAVSPLTVSAHGMHKHKPLSLEELPEICRQYFARADVCYKKAG KKADFQRNNTKFLFQALPAADLGQRQRMCQIAMDSFKEKTSNLHCE >gi|257257247|gb|ACDX02000006.1| GENE 135 132557 - 133708 1115 383 aa, chain + ## HITS:1 COG:NMB0814 KEGG:ns NR:ns ## COG: NMB0814 COG3705 # Protein_GI_number: 15676712 # Func_class: E Amino acid transport and metabolism # Function: ATP phosphoribosyltransferase involved in histidine biosynthesis # Organism: Neisseria meningitidis MC58 # 1 382 1 382 383 668 90.0 0 MQSWQLPEHVADVLPTNARQLESAREQLLTLFRVHGYELVQPPLMEYSHSLLTHIDAGLS LKTILVVDQLSGRQLGIRADITPQVARIDAHLLSANQGINRLCYAGPVLHARPEGLLNMR EPLQAGAEMYGFADIRADIELIDLMLKSMKIADMGEVLLSLGHIGVFRALSDAAHLNAQQ SKTLLALMQNKDTEAVEAQVKAWKLDGMWAKAFSLLPRLYGGREVLSAARERLPDLSAVG SALDELQAVCDAFPNQKVHIDLSELRVDNYHTGLLYAAYGSNFHDAVARGGRYDGLGEYF GRARPATGFSFDLRSFIGRLPAIERQPVVLVDAGDAEAAREAVEALREQGQCVVIDYGIG HNASEEITGRLKKSDGVWQVEKL >gi|257257247|gb|ACDX02000006.1| GENE 136 133808 - 135112 1722 434 aa, chain + ## HITS:1 COG:NMA1024 KEGG:ns NR:ns ## COG: NMA1024 COG0104 # Protein_GI_number: 15793980 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate synthase # Organism: Neisseria meningitidis Z2491 # 3 434 1 432 432 829 96.0 0 MAMAKNVVVIGAQWGDEGKGKIVDWLAEETSGVVRFQGGHNAGHTLVVGGKKTILRLIPS GILHESLDCFIGSGVVVSPEALLGEIDELNAAGVKNVEGRLKIAPTCPLILPYHIALDQA REASRGKGKIGTTGRGIGPAYEDKVARRAIRVVDLLHPEKLREKLDAILAYYNVQLQHLH NAEPVKAEDVMAVIEKVAPRITPMITDVSRVLNEKNKNGEKLLFEGAQGTLLDIDYGTYP FVTSSNCLAGAASAGAGVGPQMLDYVLGIVKAYTTRVGSGPFPTELFDEVGAGLAERGHE FGSVTGRARRCGWFDAAALKRSIQVNGISGMCITKLDVMDGIETINICVGYELPDGSKTD ILPCGSDAVETCKPIYEIMPGWSESTFGVKSYDALPANAKAYLKRIEEVCGAPVAIVSTG PDREETIVLHHPFA >gi|257257247|gb|ACDX02000006.1| GENE 137 135283 - 135633 705 116 aa, chain - ## HITS:1 COG:NMA1463 KEGG:ns NR:ns ## COG: NMA1463 COG0251 # Protein_GI_number: 15794365 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Neisseria meningitidis Z2491 # 1 116 1 115 120 158 69.0 3e-39 MNIRYLGTTERYSEAVCAGGFVFLSGMVPENPEADAKAQTENVLAQIDHWLEECGSDKAH ILEATIFLTDMNDYAAMNEAWDAWTAPGRAPARACIEAKLAKPEWAVEIKVSAVCK >gi|257257247|gb|ACDX02000006.1| GENE 138 135863 - 136345 591 160 aa, chain + ## HITS:1 COG:NMA1462 KEGG:ns NR:ns ## COG: NMA1462 COG2606 # Protein_GI_number: 15794364 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 1 160 1 159 159 240 72.0 7e-64 MSKNTDYPVTPAVRFLRTHQIDFEPYIYVYEEHGGTAQFADLFGVDEHQVVKTIVLQNEA KKGLVVVMHGDKQISTRNLARDLGMKHIEPADPKQANKWTGYLVGGTTPFGMKTQLPVYV EKSIWNLEKVYINGGKRGFIIGISPQALRALNPQDVQVAV >gi|257257247|gb|ACDX02000006.1| GENE 139 136520 - 137140 793 206 aa, chain + ## HITS:1 COG:NMA0209 KEGG:ns NR:ns ## COG: NMA0209 COG0484 # Protein_GI_number: 15793233 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone with C-terminal Zn finger domain # Organism: Neisseria meningitidis Z2491 # 1 68 1 68 373 97 60.0 2e-20 MENRNFYEILGISADADIAEIRKAYRDLAMKYHPDRNPGNPDAEERFKEIRQAYDTLVDP ERRAWYDESLREFSGRNGQTASQQTTGQQTGNTAEMLRQDGDRTYVMAMYALLALGLLTF VMPVAGIILAYVKRGDMSDSVYNNHADYLIKTFWGGLAGFILSKLTAFIGLGAVVLFLVS VWFVYRLAAGFIKLTDNKRMSLDTWF >gi|257257247|gb|ACDX02000006.1| GENE 140 137301 - 138176 1014 291 aa, chain + ## HITS:1 COG:no KEGG:NLA_10890 NR:ns ## KEGG: NLA_10890 # Name: not_defined # Def: integral membrane protein # Organism: N.lactamica # Pathway: not_defined # 1 291 1 291 291 358 75.0 2e-97 MIYLLASILCSVSVSVLLKLARKNKIDVAQAVAVNYIVAVALTAWVLKPDLSNPKAFLPT WWLFGALGVLLPSVFVIMGKAVDAAGIVKSDAAQRLSLILPIISAFVIFGEALTEGRLIG IALAFVALFCLLWKADGGKKSGGLGTQIMLLAGVWAGYGIIDILFKQLAKSGTAFSGNLL VAFSLAGILMFGYLFSQSTKWTKEGIIGGIVLGGLNFANIVTYITAHQMMKDNPTLVFAG MNIGVIVLGTLVGAMAFKEKISSINAAGISVAVCAIACLFYWPQIRGLIGM >gi|257257247|gb|ACDX02000006.1| GENE 141 138506 - 139903 1920 465 aa, chain + ## HITS:1 COG:NMB1029 KEGG:ns NR:ns ## COG: NMB1029 COG1027 # Protein_GI_number: 15676916 # Func_class: E Amino acid transport and metabolism # Function: Aspartate ammonia-lyase # Organism: Neisseria meningitidis MC58 # 1 465 1 465 465 870 94.0 0 MTVRIEHDLLGEREIPAEAYWGIHTLRAVENFKISNQKISDVPQFVRSMVMVKKATAQAN GELGAVKPEIAAAIEKACDEVLLKGRCLDQFPSDVYQGGAGTSVNMNTNEVIANLALEVL GYEKGRYDIVNPMDHVNASQSTNDAYPTGFRLAVYDSVGALLEKLALLKDAFAAKADEFK DVLKMGRTQLQDAVPMTAGQEFQSFQVLLEEEIVNLNRTRALLLEVNLGATAIGTGVNTP KGYAALAVKKLSEVSGLDCKLTENLIEATSDCGAYVMVHGALKRTAVKLSKICNDLRLLS SGPRAGLKEINLPEMQAGSSIMPAKVNPVIPEVVNQVCFKVIGNDTTITFAAEAGQLQLN VMEPVIAQCMFETISLLGNAAVNLAEKCVKGITVNREICERYVFNSIGLVTYLNPYIGHG NGDLVGKICAQTGKGVREVVLERGLLSEAELDRILSPENLINPHL >gi|257257247|gb|ACDX02000006.1| GENE 142 140161 - 141201 708 346 aa, chain + ## HITS:1 COG:no KEGG:BF2854 NR:ns ## KEGG: BF2854 # Name: not_defined # Def: hypothetical protein # Organism: B.fragilis # Pathway: not_defined # 3 341 224 496 496 177 34.0 4e-43 MCSHEISSVSDLLEILKEIGEPEQGHTRFFRGQADVRWRMLPGIYREGCEYLIENEHKII KDTFTNCPDDFSPDDTLFEKLVKLQHYGYATRLLDLTANALVALYFAAWNKEHHDKDGEL IILDIPDEEVKYGDSDTVAVLSALSLQSEDFDLIKIIDNSRVPMLTKVFEDGLKAEQIRS YIKAIETEGNESVKKIRKNIQLVLDKMDTVVYSDSFKTTFNEQKEIATLIHDIRTDKPSF RPVIEFSDFERVLCVRAKLNNARISRQQGCFLLFGISNNKLRPASIPDGWQRKAKNGQKF IVRNKESIMEELKSFGISKKTLFPELESQAEEIMSQYKPKKHGENR >gi|257257247|gb|ACDX02000006.1| GENE 143 141293 - 144334 3064 1013 aa, chain + ## HITS:1 COG:PM1982_1 KEGG:ns NR:ns ## COG: PM1982_1 COG1131 # Protein_GI_number: 15603847 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Pasteurella multocida # 1 504 1 505 543 686 68.0 0 MNTVSIQNLSHRYGKTLALDDVSLDIPKGATVGLIGPDGVGKSTLLSLMAGVKVIQDGRV EVLGGDMADKDVRRDLSHRIAFMPQGLGRNLYPTLSVYENIDFHARLFGLDGQERTRQIT RLMEATHLAPFAGRAAGKLSGGMKQKLSLCCALVHSPDLLILDEPTTGVDPLSRRQFWAL VDDLRREHAGMTVIVATAYIEEAQRFERLLAMDAGRLLENKPTADVLADYGTDVLEEAYV KMLPPEKQQGSGGLDITPFVPDPAAPPAMEAHGLTKRFGDFTAVDHVSFTIQKGEIFGFL GSNGCGKSTTMKMLTGLLEATEGDATLLGKPIDAGGLDTKMRVGYMSQAFSLYEELSVRR NLDLHARLYQMGAKGAAAVEEALQQFDLADVADTAPASLPLGIRQRLQLAAACLHHPEVL ILDEPTSGVDPAARDMFWRHLLKLSREDKITIFVSTHFMNEAARCDRISFMHKGRVLAVG TPAELATRQNAPDLEEAFVQYLIEAESDNGHSEQGGLGQDPTIPSDSTSWVSTQPTATAA DFSDDLYEQSARSSESEQSEFRQNADGVHSEQGRLGQDPTTSLDSTGWVSTQPMATAAQA MHAEVASDNGHSEFSDDPEKHHPRSSENPSATPDTQSFKYRFSMIWTFARREAKELLRDK IRLFFAVFGPLIIMASVSWGISFDVRNLKFAVYDRDQTAASRELVEYFDGSRYFLQQPPI RSEAEIDTVLKSSGAILVIDIPSGFGRDLARGLKPEVGFYVDGSMPFNATNIRGYIGSLI TAYTKDRIAESGLPVSLKAPAGIEPRFMYNQDFDSINAIAPGVMMLVLMMIPAMMSAVGV VREREIGSIANFYASPAAVAQYLIGKQLPYIAVGMVNFAAMMLMIIYLFGVPLKGSFAGL AVGTLLMVSASTALGLLISCFVRSQLAAIFATAIITMIPAQTYSGFLYPLSTMEGGALVI GKTFPSSWYYTVSVGSFTKGLHTADLLHEYAAIAAFAATSLILACVLLKKQEK >gi|257257247|gb|ACDX02000006.1| GENE 144 144414 - 144764 203 116 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157165407|ref|YP_001467497.1| 30S ribosomal protein S8 [Campylobacter concisus 13826] # 1 116 1 117 117 82 35 8e-15 MNRITLFDGLAERYGAAAEYPWAKFPDFAVFRHTGNRKWFCLYMPVPSEKLGRGEGGLTE IINVKCRPEHIGAWRATAGILPAYHMNKEHWLSIVLAQTPAENVWRLIDDSFVLTR >gi|257257247|gb|ACDX02000006.1| GENE 145 144803 - 145495 1007 230 aa, chain + ## HITS:1 COG:PM1626 KEGG:ns NR:ns ## COG: PM1626 COG1794 # Protein_GI_number: 15603491 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Aspartate racemase # Organism: Pasteurella multocida # 1 230 1 230 230 258 54.0 5e-69 MKTIGIIGGMSPESTVLYYQIINRETNRRLGGNRSAKILLDSVDFEEIVRLQKSGDWAAA GNVLAQSARKLEAGGADFLLLATNTMHKVAPAIEQAAGIPLLHVVDATAAAIKRQGLSAV GLLGTRFTMSDGFYTERMGSQGVQTITPTAAEQDEIHRIIFDELCLNRIRPESARYFYDV IGRLKNEGAQGVILGCTEICLLVNETDSPLPVFDSTAIHALSAVDAALAE >gi|257257247|gb|ACDX02000006.1| GENE 146 145767 - 146627 700 286 aa, chain + ## HITS:1 COG:AGc468 KEGG:ns NR:ns ## COG: AGc468 COG0697 # Protein_GI_number: 15887623 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 6 284 9 287 287 195 47.0 7e-50 MPSRTATILTTALAPLIWGSTYLVTTEFLPPDRPFTAALFRVLPAGLLLLAWTRRIPKRD EWATVVLLGFLNIGFFQAMLFVAAYRLPGGLAAVLSSTQTLMVLVFTWLIGKTMPPKAAW TWSAAGVLGIALLVLSPQARYDGTGILAALTGAAAMALGVYLSKHRRTSLPVLAFTGWQL FIGGLFLLPVALLAEPRLESLSPANIGGYLYLCLFGAVLAYVLFFKGIAKLSPAAVSSLG LLSPVSAFVLGWLFLGQGMDAKSLLGFTLVLVSIFGVQRAVMKKVV >gi|257257247|gb|ACDX02000006.1| GENE 147 146673 - 147710 679 345 aa, chain - ## HITS:1 COG:RSc1436 KEGG:ns NR:ns ## COG: RSc1436 COG2801 # Protein_GI_number: 17546155 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Ralstonia solanacearum # 76 340 1 274 278 211 48.0 2e-54 MDTRLSRRRHRRTRTSPIQNHDRPPQKPLHRRQTRPRKNTGRAYRRVVLYARKGCLPKGV KSPQPKADRKGQSQTVQTLRAQHPLKYLLHIANLPKSSFYYHHQDRPDPDAADKALIAET YKRHKGRYGQRRIAAALDWNRKKVARLMKQMELKALIRAKKAYRHPAMGEISEHLLKRRF TAKKPNEKWLTDVTEPKGKDGKLYLSPILDLFNREIVAYAMSRRADSEMVKEMLEKAAPR LTDKGTMLHSDQGVLYRTAGYRELLAEHSMVQSMSRKANCWDNAPMESFFAVLKTECFYN AGELTVDELMKQIDDYMDYYNRERCSLKLKKLRPVAYRTQLAQSA >gi|257257247|gb|ACDX02000006.1| GENE 148 147975 - 149318 1295 447 aa, chain - ## HITS:1 COG:no KEGG:NLA_11040 NR:ns ## KEGG: NLA_11040 # Name: not_defined # Def: DNA helicase # Organism: N.lactamica # Pathway: RNA degradation [PATH:nla03018] # 8 447 1309 1739 1741 415 51.0 1e-114 MSKIWGPVQQPDFLTFNYRSTQNIITAANRLIQDMGGRLKTLHPIVINPEKQHRPNGGIW SERDGERQGRVRVVKLPSQGSRQQKNNIQAQAVAAEIRRLQALADIEYRSIAVLSRNNGE LKPMQAWCEQNNIPYFLAKDRKHGIRLRHTREFVRLVEQLVPDKQQEGQKEKTFTGNEFA ELIRSQDVGGMWQDYFRQTAQDFLRENTADTGYPAAFLKNWLYEYVGNESESRSDGIFLG TAHSVKGLEFKHVFVLDGGWNSADESEQRLYYVAMTRAIETLTLIQNTPQHLWIGRLPEE TECVERSYTVLPELDTEYRTLSLYSDKKENRPAELDIGFIARETRNASDLISRLEAAKKL KVGDELTIRRGGWQNKQYEFCTDGIAVARTAKNAAFPELDAVSDLSAIRVRAAAFGVRYR EDEQYTDNIPKKIQKWPLVIPMLIIPK >gi|257257247|gb|ACDX02000006.1| GENE 149 149333 - 149809 490 158 aa, chain - ## HITS:1 COG:HI1721 KEGG:ns NR:ns ## COG: HI1721 COG2801 # Protein_GI_number: 16273607 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Haemophilus influenzae # 1 153 61 213 216 155 50.0 3e-38 KWLTDVTELKGKDGKLYLSPILDLFNREIVAYAMSRNANSDMVKEMLEKAAPRLTDKGTM LHSDQGVLYRTAEYRKLIAKHSMVQSMSRKANCWDNAPMESFFAVLKTECFYRAGELTVD ELMKQIDDYMDYYNRERCSLKLKKLSPVAYRTQLAQSA Prediction of potential genes in microbial genomes Time: Sat Jul 16 23:53:08 2011 Seq name: gi|257257244|gb|ACDX02000007.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont6.1, whole genome shotgun sequence Length of sequence - 114284 bp Number of predicted genes - 104, with homology - 104 Number of transcription units - 67, operones - 27 average op.length - 2.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 6/0.083 + CDS 54 - 404 294 ## PROTEIN SUPPORTED gi|148984739|ref|ZP_01818007.1| IS630-Spn1, transposase Orf1 2 1 Op 2 . + CDS 440 - 901 287 ## COG3335 Transposase and inactivated derivatives - Term 909 - 947 7.1 3 2 Tu 1 . - CDS 1191 - 1565 215 ## gi|261364673|ref|ZP_05977556.1| conserved hypothetical protein - Prom 1591 - 1650 2.2 - Term 2162 - 2197 0.2 4 3 Tu 1 . - CDS 2256 - 2756 -102 ## gi|288575773|ref|ZP_06393957.1| hypothetical protein NEIMUCOT_04895 5 4 Op 1 . + CDS 2757 - 3176 371 ## Aasi_1471 hypothetical protein 6 4 Op 2 . + CDS 3232 - 3552 431 ## COG3293 Transposase and inactivated derivatives 7 5 Op 1 . - CDS 3536 - 3826 175 ## APJL_1764 hypothetical protein 8 5 Op 2 2/0.250 - CDS 3862 - 8280 4689 ## COG1643 HrpA-like helicases 9 5 Op 3 . - CDS 8349 - 9923 1709 ## COG2194 Predicted membrane-associated, metal-dependent hydrolase 10 6 Tu 1 . - CDS 10076 - 10276 63 ## gi|261364679|ref|ZP_05977562.1| ATP-dependent RNA helicase HrpA - Prom 10340 - 10399 2.5 - Term 10369 - 10397 2.1 11 7 Op 1 . - CDS 10442 - 11701 1575 ## COG0270 Site-specific DNA methylase 12 7 Op 2 . - CDS 11774 - 12502 839 ## gi|261364681|ref|ZP_05977564.1| MjaII restriction endonuclease family protein 13 7 Op 3 . - CDS 12571 - 13968 1740 ## COG1643 HrpA-like helicases - Prom 13998 - 14057 6.5 - Term 14312 - 14361 12.2 14 8 Op 1 25/0.000 - CDS 14384 - 16171 2705 ## COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) 15 8 Op 2 9/0.000 - CDS 16171 - 16440 357 ## COG1925 Phosphotransferase system, HPr-related proteins 16 8 Op 3 2/0.250 - CDS 16488 - 16925 693 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA - Term 17001 - 17040 9.3 17 9 Tu 1 . - CDS 17055 - 17618 571 ## COG0634 Hypoxanthine-guanine phosphoribosyltransferase - Prom 17819 - 17878 5.5 + Prom 17755 - 17814 6.0 18 10 Tu 1 . + CDS 17962 - 19434 2036 ## COG0469 Pyruvate kinase + Term 19463 - 19512 15.4 - Term 19451 - 19500 11.4 19 11 Tu 1 . - CDS 19573 - 20211 660 ## NMC0100 putative inner membrane protein - Prom 20274 - 20333 4.4 + Prom 20238 - 20297 6.0 20 12 Tu 1 . + CDS 20434 - 20961 625 ## NLA_0430 hypothetical protein - Term 21246 - 21297 12.1 21 13 Op 1 27/0.000 - CDS 21324 - 22571 2072 ## COG0304 3-oxoacyl-(acyl-carrier-protein) synthase - Prom 22653 - 22712 4.4 - Term 22685 - 22724 4.4 22 13 Op 2 . - CDS 22748 - 22984 328 ## COG0236 Acyl carrier protein - Prom 23034 - 23093 5.4 - Term 23629 - 23673 3.2 23 14 Tu 1 . - CDS 23726 - 25627 2105 ## COG0147 Anthranilate/para-aminobenzoate synthases component I - Prom 25662 - 25721 6.0 + Prom 25692 - 25751 6.5 24 15 Tu 1 . + CDS 25795 - 26724 1549 ## COG2326 Uncharacterized conserved protein + Term 26759 - 26810 17.0 25 16 Tu 1 . + CDS 26953 - 27795 723 ## COG1629 Outer membrane receptor proteins, mostly Fe transport + Prom 27950 - 28009 4.5 26 17 Tu 1 . + CDS 28037 - 29857 2476 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases + Term 29993 - 30035 -0.8 27 18 Tu 1 . + CDS 30850 - 31470 1129 ## COG0702 Predicted nucleoside-diphosphate-sugar epimerases + Term 31482 - 31544 16.2 - Term 31803 - 31839 8.2 28 19 Tu 1 . - CDS 31859 - 33139 1972 ## COG1652 Uncharacterized protein containing LysM domain - Prom 33293 - 33352 4.6 29 20 Op 1 26/0.000 + CDS 33420 - 33923 781 ## COG0242 N-formylmethionyl-tRNA deformylase + Prom 33986 - 34045 2.3 30 20 Op 2 . + CDS 34151 - 35077 1146 ## COG0223 Methionyl-tRNA formyltransferase + Prom 35319 - 35378 4.0 31 21 Tu 1 . + CDS 35477 - 35998 489 ## COG2110 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 - Term 36061 - 36103 3.0 32 22 Tu 1 . - CDS 36130 - 36414 483 ## gi|288575791|ref|ZP_06393971.1| peptidase propeptide and YPEB domain protein - Prom 36438 - 36497 7.2 + Prom 36494 - 36553 5.2 33 23 Op 1 . + CDS 36740 - 37999 1261 ## COG0144 tRNA and rRNA cytosine-C5-methylases 34 23 Op 2 . + CDS 37965 - 38558 585 ## NMO_1924 hypothetical protein 35 23 Op 3 8/0.000 + CDS 38562 - 40703 2633 ## COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation 36 23 Op 4 2/0.250 + CDS 40696 - 41979 1833 ## COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains + Term 41999 - 42057 18.0 + Prom 42099 - 42158 6.1 37 24 Op 1 . + CDS 42358 - 43425 754 ## COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake 38 24 Op 2 8/0.000 + CDS 43431 - 43577 93 ## COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake 39 24 Op 3 2/0.250 + CDS 43603 - 44058 739 ## COG2922 Uncharacterized protein conserved in bacteria 40 24 Op 4 . + CDS 44143 - 46449 3085 ## COG0550 Topoisomerase IA + Term 46470 - 46520 17.1 - Term 46458 - 46506 16.7 41 25 Tu 1 . - CDS 46527 - 46748 195 ## gi|261364708|ref|ZP_05977591.1| conserved hypothetical protein - Prom 46845 - 46904 8.8 + Prom 46818 - 46877 11.0 42 26 Op 1 . + CDS 47013 - 47585 216 ## PROTEIN SUPPORTED gi|163764797|ref|ZP_02171850.1| ribosomal protein L29 + Prom 47609 - 47668 7.8 43 26 Op 2 . + CDS 47707 - 47958 393 ## COG1145 Ferredoxin + Term 48196 - 48263 30.2 + TRNA 48058 - 48141 65.9 # Tyr GTA 0 0 + TRNA 48178 - 48251 83.4 # Gly TCC 0 0 + TRNA 48263 - 48337 84.8 # Thr GGT 0 0 44 27 Tu 1 14/0.000 + CDS 48378 - 49562 1584 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 + Term 49647 - 49697 10.1 + TRNA 49569 - 49644 79.2 # Trp CCA 0 0 + Prom 49571 - 49630 80.0 45 28 Op 1 46/0.000 + CDS 49764 - 50036 63 ## COG0690 Preprotein translocase subunit SecE 46 28 Op 2 45/0.000 + CDS 50039 - 50572 387 ## COG0250 Transcription antiterminator 47 28 Op 3 55/0.000 + CDS 50678 - 51112 715 ## PROTEIN SUPPORTED gi|121634005|ref|YP_974250.1| 50S ribosomal protein L11 48 28 Op 4 43/0.000 + CDS 51112 - 51807 1122 ## PROTEIN SUPPORTED gi|161870926|ref|YP_001600106.1| 50S ribosomal protein L1 + Term 51820 - 51858 7.1 + Prom 51910 - 51969 4.8 49 29 Op 1 47/0.000 + CDS 52033 - 52533 766 ## PROTEIN SUPPORTED gi|15676058|ref|NP_273188.1| 50S ribosomal protein L10 50 29 Op 2 28/0.000 + CDS 52592 - 52963 580 ## PROTEIN SUPPORTED gi|225076432|ref|ZP_03719631.1| hypothetical protein NEIFLAOT_01478 + Term 52982 - 53015 6.1 + Prom 53021 - 53080 5.3 51 30 Op 1 58/0.000 + CDS 53154 - 57332 4008 ## PROTEIN SUPPORTED gi|163796927|ref|ZP_02190884.1| 30S ribosomal protein S12 + Prom 57400 - 57459 2.9 52 30 Op 2 . + CDS 57498 - 61673 4827 ## COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit + Term 61701 - 61735 3.5 + Prom 61791 - 61850 6.2 53 31 Op 1 6/0.083 + CDS 61882 - 62232 294 ## PROTEIN SUPPORTED gi|148984739|ref|ZP_01818007.1| IS630-Spn1, transposase Orf1 54 31 Op 2 . + CDS 62268 - 62729 294 ## COG3335 Transposase and inactivated derivatives + Term 62823 - 62865 -0.8 55 32 Tu 1 2/0.250 + CDS 63166 - 63456 379 ## COG1923 Uncharacterized host factor I protein + Term 63482 - 63523 7.3 + Prom 63461 - 63520 5.1 56 33 Op 1 2/0.250 + CDS 63547 - 64116 568 ## COG0500 SAM-dependent methyltransferases 57 33 Op 2 2/0.250 + CDS 64169 - 64543 433 ## COG3094 Uncharacterized protein conserved in bacteria 58 33 Op 3 1/0.333 + CDS 64559 - 65056 197 ## PROTEIN SUPPORTED gi|148994682|ref|ZP_01823786.1| 50S ribosomal protein L13 + Prom 65062 - 65121 6.5 59 34 Tu 1 . + CDS 65278 - 65913 926 ## COG1428 Deoxynucleoside kinases 60 35 Op 1 2/0.250 + CDS 66023 - 66460 584 ## COG1225 Peroxiredoxin 61 35 Op 2 2/0.250 + CDS 66539 - 67414 1178 ## COG4974 Site-specific recombinase XerD + Term 67425 - 67484 19.9 + Prom 67548 - 67607 8.3 62 36 Tu 1 . + CDS 67659 - 67859 282 ## COG2906 Bacterioferritin-associated ferredoxin + Term 67880 - 67928 17.4 + Prom 67884 - 67943 5.0 63 37 Tu 1 . + CDS 68022 - 68276 192 ## COG0526 Thiol-disulfide isomerase and thioredoxins + Term 68289 - 68344 -0.3 - Term 68768 - 68798 3.0 64 38 Tu 1 . - CDS 68812 - 69675 869 ## COG1091 dTDP-4-dehydrorhamnose reductase + Prom 69899 - 69958 5.8 65 39 Op 1 . + CDS 70181 - 71614 1347 ## COG2931 RTX toxins and related Ca2+-binding proteins + Term 71648 - 71708 6.2 + Prom 71687 - 71746 4.8 66 39 Op 2 . + CDS 71785 - 72651 996 ## COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase + Term 72663 - 72712 12.2 + Prom 72695 - 72754 5.6 67 40 Tu 1 . + CDS 72891 - 75011 1956 ## PROTEIN SUPPORTED gi|62291006|ref|YP_222799.1| polynucleotide phosphorylase/polyadenylase + Term 75035 - 75079 9.7 - Term 75160 - 75210 13.7 68 41 Op 1 . - CDS 75237 - 75713 754 ## COG0782 Transcription elongation factor - Prom 75763 - 75822 5.8 - Term 75788 - 75825 6.5 69 41 Op 2 . - CDS 75911 - 79051 3206 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins - Prom 79082 - 79141 7.0 + Prom 79041 - 79100 3.6 70 42 Tu 1 . + CDS 79200 - 79877 336 ## COG3235 Predicted membrane protein + Term 79880 - 79929 11.1 - Term 79868 - 79916 13.1 71 43 Tu 1 . - CDS 79934 - 81706 2391 ## COG0369 Sulfite reductase, alpha subunit (flavoprotein) - Prom 81864 - 81923 4.8 - Term 82139 - 82198 13.3 72 44 Tu 1 . - CDS 82220 - 83602 2370 ## COG1109 Phosphomannomutase - Prom 83634 - 83693 5.0 - Term 83640 - 83687 14.3 73 45 Tu 1 . - CDS 83723 - 84559 1200 ## COG2321 Predicted metalloprotease - Prom 84589 - 84648 4.0 - Term 84629 - 84680 14.5 74 46 Op 1 . - CDS 84703 - 85137 561 ## NMC1129 hypothetical protein 75 46 Op 2 . - CDS 85130 - 86437 2180 ## COG0460 Homoserine dehydrogenase + Prom 86669 - 86728 4.1 76 47 Op 1 . + CDS 86835 - 87209 405 ## COG3737 Uncharacterized conserved protein + Term 87230 - 87274 5.8 + Prom 87270 - 87329 4.1 77 47 Op 2 . + CDS 87361 - 87855 664 ## COG2077 Peroxiredoxin + Term 87874 - 87924 15.2 - Term 87868 - 87905 8.0 78 48 Op 1 . - CDS 87923 - 88087 135 ## gi|261364747|ref|ZP_05977630.1| conserved hypothetical protein 79 48 Op 2 . - CDS 88087 - 88992 1009 ## COG0408 Coproporphyrinogen III oxidase - Prom 89048 - 89107 2.3 - Term 89069 - 89119 14.4 80 49 Op 1 . - CDS 89156 - 90406 1950 ## COG0112 Glycine/serine hydroxymethyltransferase - Prom 90450 - 90509 4.5 81 49 Op 2 . - CDS 90539 - 90916 442 ## gi|261364750|ref|ZP_05977633.1| conserved hypothetical protein - Prom 90989 - 91048 7.9 + Prom 90968 - 91027 5.7 82 50 Tu 1 . + CDS 91052 - 92209 1591 ## COG2814 Arabinose efflux permease + Term 92220 - 92266 2.3 - Term 92317 - 92365 5.4 83 51 Tu 1 . - CDS 92424 - 93737 1625 ## COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase - Term 93744 - 93795 8.1 84 52 Op 1 . - CDS 93802 - 94047 222 ## gi|261364753|ref|ZP_05977636.1| conserved hypothetical protein 85 52 Op 2 . - CDS 94059 - 94679 88 ## gi|288575808|ref|ZP_05977637.2| hypothetical protein NEIMUCOT_05001 - Prom 94788 - 94847 8.9 86 53 Tu 1 . - CDS 95035 - 95364 84 ## gi|288575809|ref|ZP_05977638.2| hypothetical protein NEIMUCOT_05002 + Prom 94920 - 94979 9.1 87 54 Tu 1 . + CDS 95218 - 95601 265 ## NGK_1216 lipoprotein + Term 95605 - 95653 11.1 + Prom 95667 - 95726 4.0 88 55 Op 1 . + CDS 95752 - 97164 1569 ## COG0498 Threonine synthase + Prom 97200 - 97259 6.0 89 55 Op 2 . + CDS 97375 - 98151 1308 ## COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 + Term 98179 - 98227 15.0 + Prom 98247 - 98306 4.0 90 56 Op 1 . + CDS 98497 - 98697 229 ## NMO_0909 hypothetical protein 91 56 Op 2 . + CDS 98743 - 99423 724 ## COG0846 NAD-dependent protein deacetylases, SIR2 family + Term 99432 - 99480 7.3 + Prom 99898 - 99957 6.3 92 57 Tu 1 . + CDS 100067 - 100498 259 ## NMCC_1947 hypothetical protein + Term 100568 - 100624 13.3 - Term 100561 - 100608 11.8 93 58 Op 1 . - CDS 100626 - 102620 3035 ## COG0323 DNA mismatch repair enzyme (predicted ATPase) - Prom 102642 - 102701 4.5 - Term 102650 - 102698 9.3 94 58 Op 2 . - CDS 102718 - 104055 2045 ## COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase - Prom 104081 - 104140 5.0 + Prom 104104 - 104163 4.0 95 59 Op 1 . + CDS 104276 - 104878 747 ## Pcryo_0464 hypothetical protein + Prom 104915 - 104974 2.8 96 59 Op 2 . + CDS 105061 - 105900 628 ## COG0501 Zn-dependent protease with chaperone function + Term 105916 - 105964 14.1 + Prom 105950 - 106009 5.0 97 60 Tu 1 . + CDS 106030 - 106785 401 ## COG0496 Predicted acid phosphatase + Term 106875 - 106910 2.7 + Prom 106860 - 106919 5.9 98 61 Tu 1 . + CDS 106960 - 107856 936 ## COG0739 Membrane proteins related to metalloendopeptidases + Term 107870 - 107906 9.0 + Prom 107998 - 108057 6.6 99 62 Tu 1 . + CDS 108116 - 108454 275 ## DNO_0103 hypothetical protein + Term 108539 - 108586 8.5 100 63 Tu 1 . + CDS 108605 - 109717 1437 ## COG0842 ABC-type multidrug transport system, permease component + Term 109961 - 109989 1.6 101 64 Tu 1 . + CDS 110120 - 111574 1652 ## COG1538 Outer membrane protein + Term 111586 - 111623 8.0 - Term 111567 - 111617 15.1 102 65 Tu 1 . - CDS 111627 - 112835 768 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 - Prom 113053 - 113112 5.5 + Prom 113441 - 113500 7.5 103 66 Tu 1 . + CDS 113528 - 113833 140 ## NGK_0259 hypothetical protein - Term 113645 - 113693 2.2 104 67 Tu 1 . - CDS 113874 - 114194 399 ## COG3293 Transposase and inactivated derivatives Predicted protein(s) >gi|257257244|gb|ACDX02000007.1| GENE 1 54 - 404 294 116 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148984739|ref|ZP_01818007.1| IS630-Spn1, transposase Orf1 [Streptococcus pneumoniae SP3-BS71] # 1 116 1 116 116 117 44 2e-25 MAYSIDFRQKALDHYEQHGNISQTARTFRITNRTLYQWIALKKETGSLQHRTKGGNSERI DKEELRRYVAEHPDAYQYEIAQHLGCTASNVGYLLKTLKITRKKRQPSTKNKTSKK >gi|257257244|gb|ACDX02000007.1| GENE 2 440 - 901 287 153 aa, chain + ## HITS:1 COG:SP0016 KEGG:ns NR:ns ## COG: SP0016 COG3335 # Protein_GI_number: 15899965 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 42 152 1 111 112 140 57.0 1e-33 MPKVYLDETGFDTFYYRPYAYALRGQIVKARISGKRYERMSLVAARGDRELVAPMIYKGT MDSSLFEAWFGQFLLKELKEPSVIIMDNARFHRMAVLREMAQRAGHIILPLPPYSPELNP IEKVWANIKRHLRKVMSGCLSFEQALLGIFCFV >gi|257257244|gb|ACDX02000007.1| GENE 3 1191 - 1565 215 124 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261364673|ref|ZP_05977556.1| ## NR: gi|261364673|ref|ZP_05977556.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 124 56 179 179 230 100.0 2e-59 MFFDELIGLIQFKKLCNQSSIVFLHNPNEIKNKNLIEVRYKKSNVRFSFLEIYYYKREYV DSHGEKYIIVYPYVAKGGWVSKVLNGAVGGEKTPFLFSNRYCNLHYINSIDKLYNFNIVK EIDF >gi|257257244|gb|ACDX02000007.1| GENE 4 2256 - 2756 -102 166 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|288575773|ref|ZP_06393957.1| ## NR: gi|288575773|ref|ZP_06393957.1| hypothetical protein NEIMUCOT_04895 [Neisseria mucosa ATCC 25996] hypothetical protein NEIMUCOT_04895 [Neisseria mucosa ATCC 25996] # 1 166 1 166 166 318 100.0 6e-86 MGIVNLQDTFARGLISLLKARNNGVTFSRADQFFPKNVRYQSHKLPFGFYASNRFSSFYP YDCCGIKEKSELLKSDYPFQGTPSFLSKRGIGNYFLDLKEVDFTEERAETYYRRYIINNC GKYIPDKYSSIQGNYTKYMTTSYGFLLTQDFTQSVSTPPYWLLEMD >gi|257257244|gb|ACDX02000007.1| GENE 5 2757 - 3176 371 139 aa, chain + ## HITS:1 COG:no KEGG:Aasi_1471 NR:ns ## KEGG: Aasi_1471 # Name: not_defined # Def: hypothetical protein # Organism: A.asiaticus # Pathway: not_defined # 1 129 13 147 157 96 45.0 3e-19 MKYENLIQRSDREFKRLTGVTPVLFHEMLQITTEAESRKVKSGRPHTLSLADQLLLTLSY LRHYHTQLELAAIYGLSESNVCRTIRKTEDALIRCKRFSLPKHKNPGDHTVIIDVTESPI ERPKKTAAVLQRQEKAAHG >gi|257257244|gb|ACDX02000007.1| GENE 6 3232 - 3552 431 106 aa, chain + ## HITS:1 COG:SP1928 KEGG:ns NR:ns ## COG: SP1928 COG3293 # Protein_GI_number: 15901752 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 5 103 24 124 129 81 47.0 3e-16 MGAQHDMRLARRHLTELYPYKIVIADKGYQGLAKTGLQTPKKKSKHHLLNKQDKEANRRL GKLRTVIEHINRKLKIFKILSLPYRNRRKRFGLRANLIAGLINAMG >gi|257257244|gb|ACDX02000007.1| GENE 7 3536 - 3826 175 96 aa, chain - ## HITS:1 COG:no KEGG:APJL_1764 NR:ns ## KEGG: APJL_1764 # Name: not_defined # Def: hypothetical protein # Organism: A.pleuropneumoniae_JL03 # Pathway: not_defined # 8 85 7 84 471 94 53.0 1e-18 MSGTYHLTNSFTMKNLGSLEHADISLKPLTILCGKNNTGKTWLMYSIYGFLKNDLDKLNE INNIINNLKENGTFYFNLLEWIEKNRPLAKIFIPLH >gi|257257244|gb|ACDX02000007.1| GENE 8 3862 - 8280 4689 1472 aa, chain - ## HITS:1 COG:NMB2011 KEGG:ns NR:ns ## COG: NMB2011 COG1643 # Protein_GI_number: 15678022 # Func_class: L Replication, recombination and repair # Function: HrpA-like helicases # Organism: Neisseria meningitidis MC58 # 845 1471 478 1139 1139 984 81.0 0 MQNTKNQAHGSGIHARHNPTNDKTVSDDLQNVSGNIVAPPRYRLTKLGEQMARLPIDPKI ARILLAAKKHDCMAEILVIASALSIQDPRERPLEARDAAAKAHERFTDKQSDFLAYLNIW DSFQRERDKGLSNKQLVQWCRQYFLSHLRMREWRELHHQLAQTAIEMGLTTKEAAFRRPP EVRQLTSSENAGDQDLSAKLKQKQLDKKQHRAQIRAAKEAGYEQIHRALLTGLIANVGMK SPDGNDYTGARGSRFHLFPASALFKAKPKWVMAAELIETTKLYARDVAAIQPEWIEQEAP HLVRYHYFEPHWEQKRGEVIASERVTLYGLTVLPRRPVSYGRIAPEEAREIFIRSALVAQ EVADFNAPFFVHNQKLIREIAELEHKSRRQDVLVDEEALFAFYDARLPKAVFKERGEIVG QAGNGQRSSENLMPSETVGRILESDSRATSAVSSDTSIRPTHFSGSLKDNRQPENHLSDD LKGSLKPHIRPATTSDTTAVAELFRRAVQHISNRHYSEQEKSAWLQGADNADFWQKRIDG GNVRVATHNGRMLGFIEYQPEQSHLNCLFTDPSHQRQGIATTLLNAVLPSADSSKTITVD ASKAALAFFQKQGFVRQHENQIPRNGLVLTNYRMVRQANHVQKQPENKVAWVATQQNAQT SSETPFRAERLTPKGFAARQMTAADLDALYGLCQSQPDYYRHLGEPLTREKLARSLTALP PQACRENKHFIGFWQQGSLKAALEIIFAYPDAQTVLLGLLMVDKSAQGAGIGSNIAQNLA TVVAESGYREIILSYAEGNAPSRAFWLKNGFAETGEIDEAEEQGGANLITMSRCLPSERQ PETANPTNRAVPSPARGGGLGWEQTPDTPANPVSTKTAPPPQPSPAQAQEREQSAAASTL SDDLRPANPQQTTPSPAGEGWGEGKTVAAQTNFSPAAANPLPNPLPQEREQSAAASTLSD DPKPQKQPAPPKGRLKPLPLADIRTFQAWLKTAERDNPRLLFLSRDDLMQHAAAHITEEQ FPKHWQTADGKFKLSYRFEPHHPLDGVTLTLPLTVLNRISPAALEWLVPGMIREKIQLQI KALPKQIRRICVPVPEFITQFLSQNPDRNAPILPQLTQAIAKTAGDIRILEQINQDEWAA FRLPEHCYFNLRIIDDGGQELAMGRDLIQIQQQLGKAAATTFRDNTQEFERDNVTTWDIG TLPESIKFARGKQQLTGYLGLQKEKDGRIALRLFDTSAAEQAHRLGVIELMKLQLKEQVK DLNKGIQGFTQAAMLLKHINADTLRDDLTQAVCDRAFIGEDELPRNEKAFKEQIKRARSR LPAVKEALSRYLQETATAYAELNGKLGKHPLTHLLRQRLQTLLAAGFATRTPWAQWPRLP IYLKAMTLRLEKYSGNPARDAAREADIQELEQMWQEKTDSLVKQGQPVSDDLAAFRWMIE ELRVSLFAQELKTPCPVSVKRLWKEFELLAKM >gi|257257244|gb|ACDX02000007.1| GENE 9 8349 - 9923 1709 524 aa, chain - ## HITS:1 COG:NMB2010 KEGG:ns NR:ns ## COG: NMB2010 COG2194 # Protein_GI_number: 15677836 # Func_class: R General function prediction only # Function: Predicted membrane-associated, metal-dependent hydrolase # Organism: Neisseria meningitidis MC58 # 1 524 2 525 525 955 89.0 0 MKKSLFVLFLYSSLLTASEIAYRFVFGIEGLPAAKIAETFALIFVIAALYLFARYKASRL LIALFFALSIIANNVHYAVYQSWMTGINYWLMLKEITEVGSAGASMLDKLWLPALWGVAE VVLFCSLAKFRRKTHFAADILFTAAMLLIFGRSFSTTQEHGISPKPTYSRIKANYFSFGY FVGRVLPYQLFDLSKIPVFKQPAPSKTGQGSIQNIILIMGESESAAHLKLFGYERETSPF LTQLSQADFKPIVKQSYSAALMTAVSLPSFFNAIPHANGYEQISSGDTNMFRLAKEQGYE TYFYSAQAENEMAILNLIGKKWIDHLIQPTQLGYRNGDNMPDDKLLPLFDKINLQQGKHF IVLHQRGSHVPYGALLQQQDKVFGEANIVDKYDSTIHKTDQMIQTVFQQLQKQPENNWLF VYTSDHGQYVHKDTFNQSTVHPDSYIVPLVLYSPDAAVQQSANQAFAPCEIAFHQQLSTF LIHTLGYDMKVSGCTEGSVTGNLITGDAGSLNIRNGKAEYVYPQ >gi|257257244|gb|ACDX02000007.1| GENE 10 10076 - 10276 63 66 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261364679|ref|ZP_05977562.1| ## NR: gi|261364679|ref|ZP_05977562.1| ATP-dependent RNA helicase HrpA [Neisseria mucosa ATCC 25996] ATP-dependent RNA helicase HrpA [Neisseria mucosa ATCC 25996] # 1 66 1 66 66 129 100.0 7e-29 MQTTNPFSGSLKIDSTPSRYRLIKLGKQMAHLPIDLKIPRIFYGVPFWEMPDLQDIDDGF QELVVA >gi|257257244|gb|ACDX02000007.1| GENE 11 10442 - 11701 1575 419 aa, chain - ## HITS:1 COG:all0934 KEGG:ns NR:ns ## COG: all0934 COG0270 # Protein_GI_number: 17228429 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Nostoc sp. PCC 7120 # 77 403 74 426 477 224 39.0 2e-58 MQSPEHYTIAQVADILSVSKETLRRWDKNGTLVPQRQTDNNYRLYSRDQLEVFEEARLLF DSRWQEELAIRPRRLYKLLELFAGAGGLAIGMEQAGFESVLLNEIDAAACKTLRKNRPNW NVVEGDIAKLDFTPYRDQIDILSGGFPCQAFSYAGKKLGFEDTRGTLFFEFARAVKETNP KVFVAENVRGLLAHDEGRTLAAITDIIGELGYELVPPRVLKAVFYKVPQKRERLFLIGIR KDLADKVEFHWPSPYHRILTLQDALKAGELYKDDVPQSPGQKYPQRKAEIMAQVPAGGYW KDLPDALQREYMQKSYFLGGGKTGMARRLAWDEPSLTLTCAPAQKQTERCHPEETRPLTV REYARIQTFPDDWQFEGSLGAQYRQIGNAVPVNLAYAVGRALVRLLNDMEAEPAGQKVA >gi|257257244|gb|ACDX02000007.1| GENE 12 11774 - 12502 839 242 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261364681|ref|ZP_05977564.1| ## NR: gi|261364681|ref|ZP_05977564.1| MjaII restriction endonuclease family protein [Neisseria mucosa ATCC 25996] MjaII restriction endonuclease family protein [Neisseria mucosa ATCC 25996] # 1 242 1 242 242 480 100.0 1e-134 MSLNTKQKQKILDAAKQWFRDRIAQNHIKNTEKLTDPKQFNINPFLTVYLANFLTGNSSP ESIAKALLFPRVLGTSINTSFGQNMQSFISAIQNAVGSTASGMDIEFTDQTDGRKKYCQL KAGPNTINADDVETIAGHFKSVRNLSRTNHLKIPNDDMIVGVLYGEPEDLSSHYRRITEQ YDYDVVVGRDLWHRLTGDEGFYHELINAIGSVAVEADFSKDFERIVKMLASSETVQNLSN HE >gi|257257244|gb|ACDX02000007.1| GENE 13 12571 - 13968 1740 465 aa, chain - ## HITS:1 COG:NMB2007 KEGG:ns NR:ns ## COG: NMB2007 COG1643 # Protein_GI_number: 15678020 # Func_class: L Replication, recombination and repair # Function: HrpA-like helicases # Organism: Neisseria meningitidis MC58 # 4 462 3 461 463 871 98.0 0 MPHPDFSQTLSKDRHFLRSAFKNPNKYGGLSKVEEKYRKSHEIFLKRLAALPKPEFDNTL PVHEKLEEIKKAIAENQVTIICGETGSGKTTQLPKICLELGRGAAGLIGHTQPRRLAARS VAERIAEELKSEIGSAVGYKVRFTDHTSRDACVKLMTDGILLAETQTDRYLAAYDTIIID EAHERSLNIDFLLGYLKQLLPRRPDLKVIITSATIDAERFSQHFNGAPVLEVSGRTYPVE ILYRPLTSKDEDDAEVELTDSIVDAADELARHGEGDILVFLPGEREIREAAEALRRSTLR RNDEILPLFARLSHAEQHKIFHPSGAKRRIVLATNVAETSLTVPGIKYVIDTGLARVKRY SARAKVEQLHVEKISQAAARQRSGRCGRVSAGVCIRLFSEEDFNSRTEFTDPEIVRSNLA AVILRMAALKLGDVAAFPFLEMPDSRYINDGFQVLLELGAVEEAT >gi|257257244|gb|ACDX02000007.1| GENE 14 14384 - 16171 2705 595 aa, chain - ## HITS:1 COG:NMA0392 KEGG:ns NR:ns ## COG: NMA0392 COG1080 # Protein_GI_number: 15793400 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) # Organism: Neisseria meningitidis Z2491 # 1 584 1 584 591 994 85.0 0 MSIVLHGVAAGKGIAIGQAHLITRGTAEVPQYDVSDDLIDAEVTRFDAAIKATRKELEQL RSAIPENAPTELGAFISLHLMLLTDVTLSREPVDILKEQKINAEWALKQQSDKLAAQFDS IEDDYLRERKQDMLQVVRRIHNNLVGQSNDLNLTEGLFEDTILIAHDLSPADTVLFKEQR ITAFVTDVGGPTSHTAILGRSLDIPSVIGLHNARRLITENETVIVDGINGVLIIDPDEVV LNEYRRLAREYRLHKRELNKLKKTAATTADGINIELLANIESAEDIKALHNFGADGVGLF RSEFLYLNRDTMPSEDEQYEVYSAIVKKMKGKSITIRTVDLGVDKNPRWFGQNSTPNGSL NPALGLTGIRLCLAEPVMFRTQMRAILRAAAHGPVRMMWPMITSLSEVRQCLIHLDTAQR QLAERGETFGTVSVGCMIEIPSAALTVGSILKLVDFISIGTNDLIQYILSVDRGDDSVSH LYQPGHPAVLKMLQHIIRTANRMEKSVSICGEMAGDTAYTRMLLGMGLRRFSMNPNNLLP VKNIILHSNTALLETETAKILRSEDSEKTEKLLKLLNSAEHEEERQEEDSPIAQA >gi|257257244|gb|ACDX02000007.1| GENE 15 16171 - 16440 357 89 aa, chain - ## HITS:1 COG:NMA0391 KEGG:ns NR:ns ## COG: NMA0391 COG1925 # Protein_GI_number: 15793399 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, HPr-related proteins # Organism: Neisseria meningitidis Z2491 # 1 89 1 89 89 138 88.0 2e-33 MQKQQIEIINKLGLHARASSKFTQTASQFQSEVWVTKNGSRVNGKSIMGLMMLAAAKGTV IELETDGLDEVAAMKALTDLINDYFGEGE >gi|257257244|gb|ACDX02000007.1| GENE 16 16488 - 16925 693 145 aa, chain - ## HITS:1 COG:NMA0390 KEGG:ns NR:ns ## COG: NMA0390 COG2893 # Protein_GI_number: 15793398 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Neisseria meningitidis Z2491 # 1 145 1 145 145 239 82.0 9e-64 MINLLIITHEAVGEAYRSLTHHFFPTGMPENIRILGVEPDEDQNDIINNAIAALQEFPEN HGVLIMTDIFGATPCNAARRLVRAGKSAILTGLNAPMMIKATQYSPMAEDLAAFTETVRE AAVKGIFAITAEPEDLVCKQHAEAV >gi|257257244|gb|ACDX02000007.1| GENE 17 17055 - 17618 571 187 aa, chain - ## HITS:1 COG:NMB2047 KEGG:ns NR:ns ## COG: NMB2047 COG0634 # Protein_GI_number: 15677869 # Func_class: F Nucleotide transport and metabolism # Function: Hypoxanthine-guanine phosphoribosyltransferase # Organism: Neisseria meningitidis MC58 # 1 184 1 184 187 357 94.0 5e-99 MIDLETKRLETQAMLDNAELLFDQDQCRAALQKVADEITRDLGGKYPLLLPVMGGAVVFT GQLLPLLRFPLDFDYVHVSRYGDKLAGGAFNWKRMPDPEQIRGRHVVVLDDILDEGHTMS AIQSKLLEMGAASCRAAVFANKLIDKEKPTKADYVGMDVPNRYVFGYGMDAAGCWRNLGE IYALNQG >gi|257257244|gb|ACDX02000007.1| GENE 18 17962 - 19434 2036 490 aa, chain + ## HITS:1 COG:NMB0089 KEGG:ns NR:ns ## COG: NMB0089 COG0469 # Protein_GI_number: 15676021 # Func_class: G Carbohydrate transport and metabolism # Function: Pyruvate kinase # Organism: Neisseria meningitidis MC58 # 1 490 1 490 490 854 95.0 0 MSNAKRDVTRISHNTKIVATLGPGSNNVQLLEDMIRVGGLNVVRFNFSHGTPEFHQENAR IVREAAKRAGQEIAILADLQGPKIRVGKIAGGSIELNKGETLVLDAALEGEGTRDAVGLD YRDLPNDVVAGDVLWLDDGLLTLTVESVEGSKIVTKVENSHVLKSNKGINKRGGGLSAGA LTEKDFRDLKTAIAIGCDYLAISFVKSAEDLHTARAKVEEEMKGSTAVRPGLVSKIERVE AIENLDEIILASDGIMVARGDLAVEVGHAAVPALQKRMIRRARELRRFSITATQMMESMI TNPVPTRAEVSDVANAVLDGTDAVMCSAETAVGAYPFETVSQMAIICAAAEKEQDSLNGV AEQVDYPEAVSTNLAIAGGAVSVARAVHAKAIVALTESGSTAFEVSRHNITLPIFALTPS ISAQRRMAMYRGVRPLILATSTDHDTALNEVEAMLVEHKILSSGDQYIITSGSQMRESGS TNTLEVLRVK >gi|257257244|gb|ACDX02000007.1| GENE 19 19573 - 20211 660 212 aa, chain - ## HITS:1 COG:no KEGG:NMC0100 NR:ns ## KEGG: NMC0100 # Name: not_defined # Def: putative inner membrane protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 199 3 204 221 216 52.0 4e-55 MHASVLSRFAPALYILMFFAGFLTACVWFNPQDYLADLTPVITAFCAIALVWLAWAVASV RIKAKSEMQHREKLIQRESVHPVLHAAIRPVEDKPGMIAFVIRNHGKGMAKNIRLKATAI SDHPSASAVAAALARLPVFAEGADMLAADEIYAGIFADIHTLAKAGEFGGIVRVDADCEN VFGDACTSQTDLDISLLKQVGIIEIPRKKLLY >gi|257257244|gb|ACDX02000007.1| GENE 20 20434 - 20961 625 175 aa, chain + ## HITS:1 COG:no KEGG:NLA_0430 NR:ns ## KEGG: NLA_0430 # Name: not_defined # Def: hypothetical protein # Organism: N.lactamica # Pathway: not_defined # 1 154 12 166 183 162 54.0 5e-39 MKKLITSLPIFIVLADMVYGFVLNISQGLNLQQSTPSDGGLAVTPDIAFNSLQIIANGGM MVIIGFGLLILLQLNGTVLKRRILPIGIFRTLGLLAVLAFSVPSLWEWGNALISAAMGYP VFNFGNPRYLASAFCMPLIALLCLKRLYDWYKLHRLPQADTVVPAAAQELDRKVV >gi|257257244|gb|ACDX02000007.1| GENE 21 21324 - 22571 2072 415 aa, chain - ## HITS:1 COG:NMA0044 KEGG:ns NR:ns ## COG: NMA0044 COG0304 # Protein_GI_number: 15793076 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: 3-oxoacyl-(acyl-carrier-protein) synthase # Organism: Neisseria meningitidis Z2491 # 1 414 1 414 415 701 90.0 0 MSQRRVVITGLGQVSPVGNDVATAWSNLLAGKSGIGRITRFDASDINSQIAGEVRDFDIG QYISAKEARRMDVFIHYGIAAALQAIDDAGLGALESLDKDRVGVNIGSGIGGLPSIEATG KAVMEGGARKINPFFIPGSLINLIAGHVTILKGYRGPSYGMVSACTTGAHSIGDSARLIK YGDADVMIAGGAEGAISTLGVGGFAAMKALSTRNDDPATASRPWDKGRDGFVIGEGAGVL VLEELEHAKKRGAKIYAEIVGFGMSSDAYHITAPNEEGPALAVTRALKDAGLNPEDVDYV NAHGTSTPLGDANETKALKLALGDHARKVIVNSTKSMTGHLLGAAGGVEALYSVLAVHEQ KSPPTINIFEQDIEAGCDLDYCANEARDVKIDVAISNSFGFGGTNGTLVFKRFKD >gi|257257244|gb|ACDX02000007.1| GENE 22 22748 - 22984 328 78 aa, chain - ## HITS:1 COG:NMA0043 KEGG:ns NR:ns ## COG: NMA0043 COG0236 # Protein_GI_number: 15793075 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl carrier protein # Organism: Neisseria meningitidis Z2491 # 1 78 1 78 78 119 97.0 2e-27 MSNIEQQVKKIVAEQLGVNEAEVKNESSFQDDLGADSLDTVELVMALEEAFGCEIPDEEA EKITTVQLAIDYINAHNG >gi|257257244|gb|ACDX02000007.1| GENE 23 23726 - 25627 2105 633 aa, chain - ## HITS:1 COG:NMB1970_1 KEGG:ns NR:ns ## COG: NMB1970_1 COG0147 # Protein_GI_number: 15677800 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component I # Organism: Neisseria meningitidis MC58 # 1 424 1 386 386 719 82.0 0 MPYFALFDDAVSGRAKLYQNHVESRLFHHNELDSLDDTLQKGWQKGLHAVLFADYEFGLP LMGVESERGGNLALHWFADCADIDAASWLAQNSDDLPAGISTPQSSVSEADYLNRIRQIH EAIRRGDTYQINYTTRLHLQAYGNPVSLYRRLRQPVPYAVLSHLPDAEGKSAWTLCFSPE LFLKIGADGTISTEPMKGTAPILGDGQDERRAAELQADPKNRAENVMIVDLLRNDLGKIA QTGKVCVPEPFKVSRFGSVWQMTSTIQAQALPHITAADILRAAFPCGSITGAPKRMSMQI IESLEAEPRGLYTGSIGYLNPCESGLGFEGIFNVVIRTLSLKPVSDPISDDLDSGLTNQD KAKKPQTVEIVRQGEATPYRFQVNPLYQGVYGVGSGIVIDSDPAAEYRECGWKARFLNEL RPAFGIFETMRVENRQCRLLDLHLGRLKTSAQALNLTLPDDCETRIRQYIADLPDGLFRL KAELVSDDLILSHAATAELSAPQRVIPAPQPLPRRDYLRRFKTTRRALYDQAWQTAETQG AFDSLFFNSDDLLLEGGRSNVFIKYKGQWLTPSLDLDILNGVMRQAVLQQPQTYLGADAV IETHITRDMLEHAEEIRLSNALRGVFETEWVKS >gi|257257244|gb|ACDX02000007.1| GENE 24 25795 - 26724 1549 309 aa, chain + ## HITS:1 COG:PA0141 KEGG:ns NR:ns ## COG: PA0141 COG2326 # Protein_GI_number: 15595339 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Pseudomonas aeruginosa # 35 302 11 277 298 427 77.0 1e-119 MADHQLEPFENVELGEKQDQLQVFERAVLEHEGRGTDEDSGSAPLPANYPYKQRMRRAAY EKEKQKLQIELLKVQSWVKDSGQRIVSLFEGRDAAGKGGTIKRFMEHLNPRGARVVALEK PTTTERGQWYFQRYIQNLPTAGEMVFFDRSWYNRAGVERVMGFCEPNEYLLFMRQTPELE RMLVASGIHLFKFWFSVSREEQLRRFISRRDDPLKHWKLSPVDIQSLDRWDDYTEAKNAM FFHTHTGDAPWVIIRSDDKKRARLNCIRYFLHQLDYPGKDVKAIGKVDEKIVLVPDTRYK EKTVDIGHD >gi|257257244|gb|ACDX02000007.1| GENE 25 26953 - 27795 723 280 aa, chain + ## HITS:1 COG:PA4710 KEGG:ns NR:ns ## COG: PA4710 COG1629 # Protein_GI_number: 15599904 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Pseudomonas aeruginosa # 2 206 497 717 764 120 34.0 4e-27 MGEQFTGFATYSQGFRTPPFDSATMAFANTTYGYAVIPNANLKSERSNSFELGMKFKNER ARAQVTAFYNRYRNFIDRTEVGTASIGGRLIIQYQYQNLDRVKTYGAEASAAYKFLPGWQ VSGSIAWMHGKQQDGTPLDSAYPLNGVLGLDYAQEKWGVDTKLRWSKKHSRVSSDSVFQA PGYDVWDVGAWYKPSKNVEIGANIYSGLNLNQDKATKPQTLQIVRQGEETPYRFKFNPLY YIGNKKYWQHADVAGMSRSSVMDLYTETGRNFAARVQLKF >gi|257257244|gb|ACDX02000007.1| GENE 26 28037 - 29857 2476 606 aa, chain + ## HITS:1 COG:YPO0286 KEGG:ns NR:ns ## COG: YPO0286 COG0635 # Protein_GI_number: 16120625 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Yersinia pestis # 11 428 11 429 437 322 42.0 2e-87 MEQQIVWTPRQSAPKAFPERQALMPIWGGIPIPRPQWQNIWRQQLPHAADSDALAYLHIP FCANHCVFCGFYRNAWKESYSSVYTDKIIEEMAAEAEIRQGNGKIRAVYFGGGTPTALQT PDLARLIRACYQYLPIADDCEFTIEGRMSHFDIEKAQACIEAGANRISIGVQTFDTAIRR RLGRKHGGDEAFAYLEKLCEINAVIVVDLMFGLPNQTDAVWQNDLERATALPLSGLDTYA FNLYPMLPINRMVEKGAFPAPPGFDVQADQYAYAVETLAQKGWNQVSNSHFAYPGRGERN RYNTLVKSNIPCWAFGSGAGGNFGGFSYQVQGDLDSYLATPTGEKNIAFMSGHSPNKILL GQVQHDMETGRLNPSLFDGNAAAQKLIAQWQAMQLFEEQGSDGLIRLNTSGRYWSPTLIR KLMLTLPTQEKDQTMQKLSSEQQIMLRQSLEKNPGQVLEMLAAQNQCSFEDVIRCLPENC IRQTEGSRIVEILQAVAAWDEAVTFIAHTPDAIVEVTGKLPGGKVGRGFYNFDHPETDGG VHGHIYYENCAAIYLLERPFMGKDTCSLNFINRNGGAMFKIFVGRDEAGELKQHQIEAMR KLFEAA >gi|257257244|gb|ACDX02000007.1| GENE 27 30850 - 31470 1129 206 aa, chain + ## HITS:1 COG:ECs4385 KEGG:ns NR:ns ## COG: ECs4385 COG0702 # Protein_GI_number: 15833639 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate-sugar epimerases # Organism: Escherichia coli O157:H7 # 3 155 5 153 207 82 36.0 6e-16 MQLIFGANGPSGRAFIRTLTHPADTVAVLRKPSEDSFFSEYRIQTTVADALDADALDKVF AQYRPDSVISFVGGKNEQGIRSDALGNINIIAAAQAANPQARFILITSMGCGEQWDMMSE PFKQALGEAVRAKTEAEIYLKQSSLNWTILRPCGLDNSEDNRHILTDHPDGIPKNYMSRN GLAAAVATVLQDSDSIGKVYTVGAGS >gi|257257244|gb|ACDX02000007.1| GENE 28 31859 - 33139 1972 426 aa, chain - ## HITS:1 COG:NMB0109 KEGG:ns NR:ns ## COG: NMB0109 COG1652 # Protein_GI_number: 15676037 # Func_class: S Function unknown # Function: Uncharacterized protein containing LysM domain # Organism: Neisseria meningitidis MC58 # 1 397 39 429 443 481 58.0 1e-136 MQQRIITLLCVAGMAISAHAQAASLKVRPDAPQRYVVKNGDTLWSISGKYLYSPWQWNRL WGANRGEIRNPHLIYPGQVLVLRYVNGRPQLGFENSSAGNDGIPVIKLSPRVRETSSGYG IQTVNVNFYRMFMQHPQFIDQMKTQDAPRLIDGPDNRIMYSKGERVYAYGITEPGRYLVY RAVKDLTDPDTRKYLGQEVVFSGIVSTLPYTNSALDSASDEDRKYLKDGEYYTRLHPLAK VPTQTAQPMIVEEAVSEIRKGDFLLKMDGETEPFQIMPHAPTQHIDGKVISILDGVHEAG QFQTVTLNKGSADGLDKGTVLSIYKRDRQVKIDLEDGKKGRKSVVKYVSIPAEETALAMV YRTGEHLSSAIILENLTNVNIGDTVSEPGRDLDNMSDDKPHVRNEPQDSHDTEHNQYNIH SNINKY >gi|257257244|gb|ACDX02000007.1| GENE 29 33420 - 33923 781 167 aa, chain + ## HITS:1 COG:NMA0164 KEGG:ns NR:ns ## COG: NMA0164 COG0242 # Protein_GI_number: 15793191 # Func_class: J Translation, ribosomal structure and biogenesis # Function: N-formylmethionyl-tRNA deformylase # Organism: Neisseria meningitidis Z2491 # 1 167 1 167 167 299 97.0 2e-81 MALLNILQYPDERLHTVAKPVEKVDERIQKLVADMFETMYEARGIGLAATQVDVHERVVV MDLTEDRSEPRVFVNPVIVEKDGETTYEEGCLSVPGIYDTVTRAERVKVEALNEKGEKFT LEADGLLAICVQHELDHLMGIVFVERLSQLKQGRIKTKLKKRQKHTI >gi|257257244|gb|ACDX02000007.1| GENE 30 34151 - 35077 1146 308 aa, chain + ## HITS:1 COG:NMA0163 KEGG:ns NR:ns ## COG: NMA0163 COG0223 # Protein_GI_number: 15793190 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA formyltransferase # Organism: Neisseria meningitidis Z2491 # 1 308 1 308 308 505 90.0 1e-143 MKVIFAGTPDFAAAALKAIAAASFEIPLVLTQPDRPKGRGMQLAPSPVKQAALELGLRVA QPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQDVLDTPKHGCLNIHASLLPRWRGAAP IQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTDTANEVHDALMSLGAAAIVAD LQQLKTEGRLKSVKQPEEGVTYAQKLSKEEARIDWNESATVIERKIRAFNPVPAAWVEYQ GKPMKIWRAEVVAQQGRAGEVLSCSADGLVVACGENALKITELQPSGSKRMPIAAFAAGH KIEVGTVL >gi|257257244|gb|ACDX02000007.1| GENE 31 35477 - 35998 489 173 aa, chain + ## HITS:1 COG:RSc0334 KEGG:ns NR:ns ## COG: RSc0334 COG2110 # Protein_GI_number: 17545053 # Func_class: R General function prediction only # Function: Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 # Organism: Ralstonia solanacearum # 4 166 8 167 171 192 59.0 4e-49 MAVFEVVEGDITKLEVDAIVNAANSSLLGGGGVDGAIHRAAGRELLEECRQLNGCRTGEA KITQGYRLPAKFVIHTVGPVWFGGHRSEAVKLAEAYQNSLLLAQEHGIRSIAFPCISTGV YRFPADLAAETALAILKKTLPQCPSVEKIVFCCFSPQDAQRYRALLERDGAVV >gi|257257244|gb|ACDX02000007.1| GENE 32 36130 - 36414 483 94 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|288575791|ref|ZP_06393971.1| ## NR: gi|288575791|ref|ZP_06393971.1| peptidase propeptide and YPEB domain protein [Neisseria mucosa ATCC 25996] peptidase propeptide and YPEB domain protein [Neisseria mucosa ATCC 25996] # 1 94 8 101 101 163 100.0 4e-39 MKLRALSLLAVSAALISGSLTAAAAPHKHSRSISQAQAVKIAKKRVGSGRVTDVDYSRGR WEIEIRRGCTEYDVDVSSQSGRVIKVDTDNHCDD >gi|257257244|gb|ACDX02000007.1| GENE 33 36740 - 37999 1261 419 aa, chain + ## HITS:1 COG:NMB0112 KEGG:ns NR:ns ## COG: NMB0112 COG0144 # Protein_GI_number: 15676040 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA and rRNA cytosine-C5-methylases # Organism: Neisseria meningitidis MC58 # 1 419 1 419 419 763 90.0 0 MSMSLAQKLAADSIAAVAEGRNLQDVLAQIRAAHPELTAQENGALQDIAYGCQRYLGSLK HMLAQMLKKPIDNPQLESLLLAAMYQLHYTRNAPHAVVNEAVESIAKIGRGQFRSFANAI LRRFLRERQKLEASCKKDDVAKHNLPLWWVEYLKNHYPKHWHNITTALQSHPPMTLRVNR RHSNAESYLEKLAAEGIAAKALDEYAVTLDEAVPVSRLPGFAEGLVSVQDFGAQQAAYLL NPKDGERILDACAAPGGKTGHMLELADCHVTALDIDEGRLKRVKDNIDRLGFQTTALTCA DAQDLAAWYDGKPFDAILADVPCTASGVARRNPDVKWLRRPTDAAKTARQQEALLDALWQ TLTKNGRMLLATCSVFVEENDVQLQKFLNRHADAELIESRVLLPNKHQDGFYYALIKKQ >gi|257257244|gb|ACDX02000007.1| GENE 34 37965 - 38558 585 197 aa, chain + ## HITS:1 COG:no KEGG:NMO_1924 NR:ns ## KEGG: NMO_1924 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 1 194 19 213 217 272 71.0 7e-72 MAFITRLSKSSKRLFGTLLLALSLNAAAEGISVTRSEAKLTETGQLSVSSRFRTDLPDQL KQALRQGVPLNFTLSWQLSAPSMPSYRFKFDQLLNSDNTIHYKLSFHPLTNRYRITVGTF STEYDTLETALRGVGAVANWKVLSKGALSGVAAKDTQAEIRLLLSTAKLPKPFQINALTS KNWHLDSGWKSLTISQE >gi|257257244|gb|ACDX02000007.1| GENE 35 38562 - 40703 2633 713 aa, chain + ## HITS:1 COG:NMA0160 KEGG:ns NR:ns ## COG: NMA0160 COG5000 # Protein_GI_number: 15793187 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation # Organism: Neisseria meningitidis Z2491 # 1 713 1 706 706 1033 75.0 0 MRRFLLIAVLAAVGLLYGLTIATGSTSPLAEYFWWIIALCALLMLVLASVLTRYVLLLMR DKSKGVFGSQIARRLSGMFTLVAVLPGVFLFGISAQFINGTINSWFGNDTHEALERSLNL SKSALNLAVDNAVSNATPVQIDLISTASVDGDLGKALKNAAKSGGFTQLSLYDVKTHKTE KSVNPLKLNQPELDKEGWEKLEQTGSIRSLENIENVLYAQGWMLIGAHNGRDYALFFRQP IPQDVAQDATLIEAARAKYAELSYTKQGLQTFFLATLLVAALLAIFLALVMALYFARRFV EPVLSLAEGARAVAQGDFSQKRPVFRNDEFGRLTQLFNHMTEQLAIAKEADDHNRLREEA ARHYLECVLESLTTGVITLDAEGRLKTFNKAAERILGIELVPLWGSNWHDWRGQSPQQTL LAEVFAAIEETANAAKPVQVEYAAPDDARILLGKATVLPDDNDNGVVMVIDDITVLIRAQ KEAAWGEVAKRLAHEIRNPLTPIQLSAERLAWKLHDKLDEQHAQILSRSTDTIVKQVAAL KEMVEAFRNYARAPSLNFEKHDLNRLVEEVLLLYEGGACRFVSDLSDKPQPISADTTAMR QVLHNIFKNAAEAAEEAEEAEEAEVPQVNVSVGEDSDGQVLLTVCNNGKGFSKEMLHNAF EPYVTDKPTGTGLGLPVVKKIIEEHGGRISLSNQNEGGACVKIALPRLVETYA >gi|257257244|gb|ACDX02000007.1| GENE 36 40696 - 41979 1833 427 aa, chain + ## HITS:1 COG:NMB0115 KEGG:ns NR:ns ## COG: NMB0115 COG2204 # Protein_GI_number: 15676043 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains # Organism: Neisseria meningitidis MC58 # 1 427 1 425 425 566 71.0 1e-161 MRSSDILIVDDEVGIRDLLSEILQDEGYSVALAENAEEARQLRHQTRPAMVLLDIWMPDC DGITLLKEWAKNGQLNMPVVMMSGHANIDTAVEATKIGALDFLEKPIALQKLLSTVDRAL KHGEMQMAAGLSFDKLGNSPAIQEFKQQLEPAVKKSGHVLLNGETGSPFEIVARYFHKSG TPWVGLSRVELIADAPLELLQKASGGTLYLGDAAQYSKNIQNGISFILGKADRYNVRVIV AGSHAADESPADAIADAKLSELLSGNVISIPPLRSQSEDIAFLVNQVMTELADSEKIQPV KFSNGSLTVLCQYNWPGNFDQLRSVVKNLMLEADGQEVHEQAVVAALGQKRATVATEIVG GFNFNMPLRELREELERRYFEYHIAQEGQNMSRVAQKVGLERTHLYRKLKQLGISVSRRS AAEKAEE >gi|257257244|gb|ACDX02000007.1| GENE 37 42358 - 43425 754 355 aa, chain + ## HITS:1 COG:NMB0116 KEGG:ns NR:ns ## COG: NMB0116 COG0758 # Protein_GI_number: 15676044 # Func_class: L Replication, recombination and repair; U Intracellular trafficking, secretion, and vesicular transport # Function: Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake # Organism: Neisseria meningitidis MC58 # 1 326 1 327 397 521 83.0 1e-148 MTENDRLAWLQLAFTPYVGAEGFLLLLQRFGSAKAALDAPAEQIAAIVRHKQAAESWRKA EKRALAQKAAEAALQWETQDGCRLLLLQDGDFPEMLTQGITAPPVLFLRGNVQLLHKPSA AIVGSRHATPQAMRIAKDFGKALSEKDIPVVSGMASGIDTAAHQGALQAGGGTIAVWGTG IDRIYPPSNKNLAYEIAEKGLIVSEFPLDTRPFAGNFPRRNRLIAALSQVTLVVEAALES GSLITAKLAAEMGREVMAVPGSIDNPHSKGCHKLIKDGAKLVECLDDILHECPGLLQNAA VPSYSINKKNKKRKNALPSERRRLNLFCRFQTTFMSENSRPQPIRLPRRQRKTNC >gi|257257244|gb|ACDX02000007.1| GENE 38 43431 - 43577 93 48 aa, chain + ## HITS:1 COG:NMB0116 KEGG:ns NR:ns ## COG: NMB0116 COG0758 # Protein_GI_number: 15676044 # Func_class: L Replication, recombination and repair; U Intracellular trafficking, secretion, and vesicular transport # Function: Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake # Organism: Neisseria meningitidis MC58 # 1 47 350 396 397 58 74.0 2e-09 MGYDPVHPDILAQQTAWAAADVYARLLEYELDGIVAALPGGRYQRIKA >gi|257257244|gb|ACDX02000007.1| GENE 39 43603 - 44058 739 151 aa, chain + ## HITS:1 COG:NMA0157 KEGG:ns NR:ns ## COG: NMA0157 COG2922 # Protein_GI_number: 15793184 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 151 1 153 153 218 76.0 2e-57 MTEVIAYLIEHFQDFDNCPPPEDLGRLLEDAGFDVTEIGNTLMMMEVLFNTSEFAAAPFD SHALRVYCNEEVENLPQEVMGLMQYLVAERAITYEQREIVIHALMHIPPEEITLDTAKVL VLLLLWAHKSELPVLIGDDLMGALNGKATMH >gi|257257244|gb|ACDX02000007.1| GENE 40 44143 - 46449 3085 768 aa, chain + ## HITS:1 COG:NMA0156_1 KEGG:ns NR:ns ## COG: NMA0156_1 COG0550 # Protein_GI_number: 15793183 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Neisseria meningitidis Z2491 # 1 570 1 570 570 1087 98.0 0 MAKNLLIVESPSKAKTLKKYLGGDFEILASYGHVRDLVPKNGAVDPEHDFAMKYELIKRN AKHVDAIVAGAKEAENIYLATDPDREGEAISWHLFEILKSKRGLKNIKPQRVVFHEITKN AVLDAVANPREIEMDLVDAQQARRALDYLVGFNLSPLLWKKIRRGLSAGRVQSPALRLIC ERENEIRAFEAQEYWTVHLDSHKGRSKFTAKLAQYNGAKLEQFDLPNEAAQADVLKELEG KEAVVTAIEKKKRSRNPAAPFTTSTMQQDAVRKLGFTTDRTMRTAQQLYEGIDVGQGAIG LITYMRTDSVNLADEALTEIRHYIENKIGKEYLPSAAKQYKTKSKNAQEAHEAIRPTSVY RTPESVKPFLSADQFKLYQMIWQRTVACQMTPAKFDQTTVDITVGKGVFRVTGQVQTFAG FLSVYEESSDDEEGEDSKKLPEMSEGDKLPVDKLYGEQHFTTPPPRYNEATLVKALEEYG IGRPSTYASIISTLKDREYVTLEQKRFMPTDTGDIVNKFLTEHFAQYVDYHFTAKLEDQL DEIADGKRRWIPVMDKFWKPFIKQVEEKEGIERAKFTTQELDETCPKCGEHKLQIKFGKM GRFVACAGYPECSYTRNVNETAEEAAERIAKAEAEQAELDGRECPKCGGRLVYKYSRTGS KFIGCANYPKCKHVEPLEKPKDTGVQCPQCKKGNLVERKSRYGKLFYSCSTYPDCNYATW NPPVAEECPNCHWPVLTIKTTKRWGVEKVCPQKECGWKEQIEPPAPKE >gi|257257244|gb|ACDX02000007.1| GENE 41 46527 - 46748 195 73 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261364708|ref|ZP_05977591.1| ## NR: gi|261364708|ref|ZP_05977591.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 73 1 73 73 119 100.0 5e-26 MPLWKIILGVYIGGVIAFTAHAHFFDEYYRHLGLIPNLGRGLLWFVFCLPLIGKTVALIV SLFFLATLVFARR >gi|257257244|gb|ACDX02000007.1| GENE 42 47013 - 47585 216 190 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764797|ref|ZP_02171850.1| ribosomal protein L29 [Bacillus selenitireducens MLS10] # 1 156 1 162 199 87 30 2e-16 LIMSKHSKHSNQVRIIGGQCRGRKLVFADTDGLRPTPDSVREKLFNWLGQDLTGLNALDL FAGSGALGFEAASRNAKRVVLADNNRKTADMLRQNARALGLDKLEILNTDGLAYLQRSSE KFDVVFLDPPFAWQDWENLFASLKNSLKNGAMVYIEAGELPDFPEWLEPYREGRAGKSGF VLLQFVQVAE >gi|257257244|gb|ACDX02000007.1| GENE 43 47707 - 47958 393 83 aa, chain + ## HITS:1 COG:NMB0123 KEGG:ns NR:ns ## COG: NMB0123 COG1145 # Protein_GI_number: 15676051 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Neisseria meningitidis MC58 # 1 83 1 83 83 132 98.0 2e-31 MSLFITDECINCDVCEPECPNDAISQGEEIYEINPNLCTQCVGHYDEPQCQQVCPVDCIL IDEEHPETHEELMAKYEKIIQFK >gi|257257244|gb|ACDX02000007.1| GENE 44 48378 - 49562 1584 394 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 393 1 406 407 614 74 1e-175 MAKEKFERSKPHVNVGTIGHVDHGKTTLTAALTTILAKKFGGAAKAYDQIDNAPEEKARG ITINTSHVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHI LLARQVGVPYIIVFMNKCDMVDDAELLELVEMEIRDLLSSYDFPGDDCPIVQGSALKALE GDAAYEEKIFELAAALDSYIPTPERAVDKPFLLPIEDVFSISGRGTVVTGRVERGVIHVG DEIEIVGLKETQKTTCTGVEMFRKLLDEGQAGDNVGVLLRGTKREEVERGQVLAKPGTIT PHTKFKAEVYVLSKEEGGRHTPFFANYRPQFYFRTTDVTGAVTLEEGVEMVMPGENVAIT VELIAPIAMEEGLRFAIREGGRTVGAGVVSSIIA >gi|257257244|gb|ACDX02000007.1| GENE 45 49764 - 50036 63 90 aa, chain + ## HITS:1 COG:NMB0125 KEGG:ns NR:ns ## COG: NMB0125 COG0690 # Protein_GI_number: 15676053 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecE # Organism: Neisseria meningitidis MC58 # 1 89 1 90 92 113 63.0 8e-26 MTEHTSEHKAEKSGQLVTSGNHSTPPKREGLLSYFRNSWSEFKKVVWPARDDAVKMTIFV VIFVSILAVFIYAADSAISWLFFDVLLKRG >gi|257257244|gb|ACDX02000007.1| GENE 46 50039 - 50572 387 177 aa, chain + ## HITS:1 COG:NMA0147 KEGG:ns NR:ns ## COG: NMA0147 COG0250 # Protein_GI_number: 15793175 # Func_class: K Transcription # Function: Transcription antiterminator # Organism: Neisseria meningitidis Z2491 # 1 177 1 177 178 293 89.0 1e-79 MSKRWYVVQAYSGFEKNVQKTLKERIAREGMEGYFGQILVPVEEVVDIKNGRKTISERKF YPGYVLVEMEMTDDSWHLVKSTPRVSGFIGGTANKPTPISQREADAILQQVRTGVEKPKP KVEFEVGQQVRVNEGPFADFNGIVDEVNYERNKLRVSVQIFGRETPVELEFGQVEKI >gi|257257244|gb|ACDX02000007.1| GENE 47 50678 - 51112 715 144 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|121634005|ref|YP_974250.1| 50S ribosomal protein L11 [Neisseria meningitidis FAM18] # 1 144 1 144 144 280 99 3e-74 MAKKIIGYIKLQIPAGKANPSPPVGPALGQRGLNIMEFCKAFNAATQGMEPGLPIPVVIT AFADKSFTFVMKTPPASILLKKAAGLQKGSSNPLTNKVGKLTRAQLEEIAKTKEPDLTAA DLDAAVRTIAGSARSMGLDVEGVV >gi|257257244|gb|ACDX02000007.1| GENE 48 51112 - 51807 1122 231 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|161870926|ref|YP_001600106.1| 50S ribosomal protein L1 [Neisseria meningitidis 053442] # 1 231 1 231 231 436 98 1e-121 MAKVSKRLKALRSSVEANKLYAIDEAIALVKKAATAKFDESVDVSFNLGVDPRKSDQVIR GSVVLPKGTGKTTRVAVFTQGANADAAKEAGADVVGFEDLAAEIKAGNLNFDVVIASPDA MRIVGQLGTILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVQYRTDKAGIVHATIGRASF AEADLKENFDALLDAIVKAKPAAAKGQYLKKVAVSSTMGLGVRVDTSSVNN >gi|257257244|gb|ACDX02000007.1| GENE 49 52033 - 52533 766 166 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15676058|ref|NP_273188.1| 50S ribosomal protein L10 [Neisseria meningitidis MC58] # 1 166 1 166 166 299 96 4e-80 MSLNIETKKVAVEEISTAIANAQTLVVAEYRGISVSSMTELRANARKEGVYLRVLKNTLA RRAVEGTSFAALADQMVGPLVYAASEDAVAAAKVLHQFAKKDDKIVVKAGSYNGEVMNAT QVAELASIPSREELLSKLLFVMQAPVSGFARGLAALAEKKAGEEAA >gi|257257244|gb|ACDX02000007.1| GENE 50 52592 - 52963 580 123 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225076432|ref|ZP_03719631.1| hypothetical protein NEIFLAOT_01478 [Neisseria flavescens NRL30031/H210] # 1 123 1 123 123 228 99 1e-58 MAITKEDILEAVGSLTVMELNDLVKAFEEKFGVSAAAVAVAGPAGGGAAAAEEKTEFDVV LASAGDQKVGVIKVVRAITGLGLKEAKDIVDGAPKTLKEGVSKAEAEDIQKQLEEAGAKV EIK >gi|257257244|gb|ACDX02000007.1| GENE 51 53154 - 57332 4008 1392 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163796927|ref|ZP_02190884.1| 30S ribosomal protein S12 [alpha proteobacterium BAL199] # 4 1391 8 1389 1392 1548 56 0.0 MNYSFTEKKRIRKSFAKRENVLDVPFLLATQIDSYAKFLQLENAFDQRTDDGLQAAFNSI FPIVSHNGYARLEFVHYTLGEPLFDIPECQLRGITYAAPLRARIRLVILDKEASKPTVKE VRENEVYMGEIPLMTPSGSFVINGTERVIVSQLHRSPGVFFEHDRGKTHSSGKLLFSARI IPYRGSWLDFEFDPKDLLYFRIDRRRKMPVTILLKALGYNNEQILDIFYDKETFYLSENG VQTDLVVGRLKGETAKVDILDKEGNVLVAKGKRITAKNIRDISNAGLTRLDVEPESLLGK ALAADLIDPETGEVLAVANDEITEELLAKFDIHGVKQLTTLYINELDQGGYISNTLRTDE TVDQQAARVAIYRMMRPGEPPTEEAVEQLFNRLFFSEDSYDLSRVGRMKFNTRTYEQKLS EAQQHSWYGRLLNETFAGAAEKGGYVLSVEDIVASIATLVELRNGHGEVDDIDHLGNRRV RSVGELTENQFRSGLARVERAVKERLNQAESENLMPHDLINAKPVSAAIKEFFGSSQLSQ FMDQTNPLSEVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLIN SLSVYARTNDYGFLETPYRRVIDGKVTEEIDYLSAIEEGRYVIAQANADLDKDGNLIGDL VTCREKGETIMATPDRVQYMDVATGQVVSVAASLIPFLEHDDANRALMGANMQRQAVPCL RPEKPMVGTGIERSVAVDSATAIVARRGGVVEYVDANRVVIRVHDDEATAGEVGVDIYNL VKFTRSNQSTNINQRPAVKAGDVLQRGDLIADGASTDLGELALGQNMTIAFMPWNGYNYE DSILISEKVAADDRYTSIHIEELNVVARDTKLGAEDITRDIPNLSERMQNRLDESGIVYI GAEVEAGDVLVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRMPTGMSGTVIDVQV FTREGIQRDKRAQSIIDSELKRYRQDLGDQLRIFDNDAFDRIERMIVGQKANGGPMKLAK GSEISTEYLAGLPSKHDWFDIRLADEDLAKQLELIKLSLQQKREEADELYEIKKKKLTQG DELQPGVQKMVKVFIAIKRRLQAGDKMAGRHGNKGVVSRILPVEDMPYMADGRPVDIVLN PLGVPSRMNIGQILEVHLGWAAKGIGERIDRMLKEQRKASELREFLNKLYNGSGKKEDLD ALTDEEIIELASNLRKGASFASPVFDGAKESEIREMLNLAYPSDDPEVEKLGFNDSKTQI TLYDGRSGEPFDRKVTVGVMHYLKLHHLVDEKMHARSTGPYSLVTQQPLGGKAQFGGQRF GEMEVWALEAYGAAYTLQEMLTVKSDDVTGRTKMYENIVKGEHKIDAGMPESFNVLVKEI RSLGLDIDLERY >gi|257257244|gb|ACDX02000007.1| GENE 52 57498 - 61673 4827 1391 aa, chain + ## HITS:1 COG:NMA0141 KEGG:ns NR:ns ## COG: NMA0141 COG0086 # Protein_GI_number: 15793169 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, beta' subunit/160 kD subunit # Organism: Neisseria meningitidis Z2491 # 1 1391 1 1391 1391 2684 98.0 0 MNLLNLFNPLQTAGMEEEFDAIKIGIASPETIRSWSYGEVKKPETINYRTFKPERDGLFC AKIFGPVKDYECLCGKYKRLKFKGVTCEKCGVEVTLSKVRRERMGHIELAAPVAHIWFLK SLPSRLGMVLDMTLRDIERVLYFEAFVVTDPGMTPLQRRQLLTEDDYYNKLDEYGDDFDA KMGAEGIRELLRTLDVAGEIEILRQELESTGSDTKIKKIAKRLKVLEAFHRSGMKLEWMI MDVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELHAPDIIVRNEKRM LQEAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVITVG PYLRLHQCGLPKKMALELFKPFIFHKLEKQGLASTVKAAKKLVEQEVPEVWDILEEVIRE HPIMLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQM EARTLMLASNNVLSPANGEPIIVPSQDIVLGLYYMTRDRINAKGEGSLFADVKEVHRAYH TKQVELGTKITVRLREWVKNEAGEFEPVVTRYETTVGRALLSEILPKGLPFEYINKALKK KEISKLINASFRLCGLRDTVIFADHLMYTGFGFAAKGGISIAVDDMEIPKEKAALLAEAN AEVKEIEDQYRQGLVTNGERYNKVVDIWGRAGDKIAKAMMDNLSKQKVIDRDGNEVDQES FNSIYMMADSGARGSAAQIKQLSGMRGLMAKPDGSIIETPITSNFREGLTVLQYFIATHG ARKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTSDGFVMKAVVQGGDVIEALRDR ILGRVTASDVVDPSSGETLVEAGTLLTEKLVDMIDQSGVDEVKVRTPITCKTRHGLCAHC YGRDLARGKLVNAGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAASQVEAKSNGTA RFSSQMRYVANNKGELVVIGRSCEVVIHDDIGRERERHKVPYGAILMVQDGEAIKAGQTL ATWDPHTRPMITEHAGWVKFENVEEGVTVAKQTDDVTGLSTLVVIDGKRRSSSASKLLRP TVKLLDENGLEICIPGTSTPVSMAFPVGAVITVREDQEIGKGDVLARIPQASSKTRDITG GLPRVAELFEARVPKDAGMLAEITGTVSFGKETKGKQRLIITDVDGVAYETLISKEKQIL VHDGQVVNRGETIVDGAVDPHDILRLQGIEALARYIVQEVQEVYRLQGVKISDKHIEVII RQMLRRVNIVDSGETEFITGEQVERGDVMTANEKALEEGKEPARYENVLLGITKASLSTD SFISAASFQETTRVLTEAAIMGKQDELRGLKENVIVGRLIPAGTGLTYHRSRRQQWQEVE QETSEINAADE >gi|257257244|gb|ACDX02000007.1| GENE 53 61882 - 62232 294 116 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148984739|ref|ZP_01818007.1| IS630-Spn1, transposase Orf1 [Streptococcus pneumoniae SP3-BS71] # 1 116 1 116 116 117 44 2e-25 MAYSIDFRQKTLDHYEQHGNISQTARTFRITNRTLYQWIALKKETGSLQHRTKGGNSERI DKEELRRYVAEHPDAYQYEIAQHLGCTASNVGYLLKTLKITRKKRQPSTKNKTSKK >gi|257257244|gb|ACDX02000007.1| GENE 54 62268 - 62729 294 153 aa, chain + ## HITS:1 COG:SP0016 KEGG:ns NR:ns ## COG: SP0016 COG3335 # Protein_GI_number: 15899965 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 42 152 1 111 112 140 57.0 1e-33 MPKVYLDETGFDTFYYRPYAYALRGQIVKARISGKRYERMSLVAARGDRELVAPMIYKGT MDSSLFEAWFGQFLLKELKEPSVIIMDNARFHRMAVLREMAQRAGHIILPLPPYSPELNP IEKVWANIKRHLRKVMSGCLSFEQALLGIFCFV >gi|257257244|gb|ACDX02000007.1| GENE 55 63166 - 63456 379 96 aa, chain + ## HITS:1 COG:NMA0961 KEGG:ns NR:ns ## COG: NMA0961 COG1923 # Protein_GI_number: 15793918 # Func_class: R General function prediction only # Function: Uncharacterized host factor I protein # Organism: Neisseria meningitidis Z2491 # 1 96 1 97 97 145 91.0 2e-35 MTAKGQMLQDPFLNALRKEHVPVSIYLVNGIKLQGQVESFDQYVVLLRNTSVTQMVYKHA ISTIVPARAVSLQHENKPQAAAAAPVQVETVQQPAE >gi|257257244|gb|ACDX02000007.1| GENE 56 63547 - 64116 568 189 aa, chain + ## HITS:1 COG:NMB0747 KEGG:ns NR:ns ## COG: NMB0747 COG0500 # Protein_GI_number: 15676645 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Neisseria meningitidis MC58 # 1 189 1 188 188 263 68.0 2e-70 MQLENILPFAHALLKQALKPDARALDGTAGNGNDTLMLARSIGSGGKVWAFDVQEQALAN TRMRLEEAGMADRVELILDGHENLATHIREPLDAAVFNFGWLPGGDKSCTTEAATSIRAL TSALSLLKTGGVAVAVLYPGHEAGQHEAQAIEDWAQRLPQDEFAVLRYGFINRRNCPPYL LAFEKLRQE >gi|257257244|gb|ACDX02000007.1| GENE 57 64169 - 64543 433 124 aa, chain + ## HITS:1 COG:NMB0746 KEGG:ns NR:ns ## COG: NMB0746 COG3094 # Protein_GI_number: 15676644 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 1 124 1 124 124 186 89.0 1e-47 MQYLFVKYSHQIFVTITILVFNIRFFLLWRHPDKPLAGFWKALPHLNDTMLLFTGLWLMK ITHFSPFNAPWLGSKILLLLVYIGLGMVMMRARPRSPKFYTVYVLAMACVGCIVYLAKTK TLPF >gi|257257244|gb|ACDX02000007.1| GENE 58 64559 - 65056 197 165 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148994682|ref|ZP_01823786.1| 50S ribosomal protein L13 [Streptococcus pneumoniae SP9-BS68] # 7 139 122 253 278 80 39 3e-14 MPSPHFAVIALGSNLAEPARQVRAALSALEAHPQIQIEKTSSLYVTAPVGYDNQPDFVNA VCSVRTSLDGVSLLAVLNRIEADFGRERTFRNAPRTLDLDIIDFDGISSDDPHLTLPHPR AHERSFVMKPLAEILPDFVLGGHGRAADLAAALGDEGIRLLEEAV >gi|257257244|gb|ACDX02000007.1| GENE 59 65278 - 65913 926 211 aa, chain + ## HITS:1 COG:RSc2629 KEGG:ns NR:ns ## COG: RSc2629 COG1428 # Protein_GI_number: 17547348 # Func_class: F Nucleotide transport and metabolism # Function: Deoxynucleoside kinases # Organism: Ralstonia solanacearum # 4 211 7 214 214 129 35.0 4e-30 MNYRYIVVEGSIGSGKNALSRRLAEHFSALSLAENPEHNPFLMKFYANASHHGLATELFF LMRRAESVDIIKNEYAQGGMVVADFLLEKDRIFTPVVLNEDEQQLFADLKQKILPQYPAP DLVIYLQTAVDGNRKRLQKRGDGIINLFPEGYLGRIHEGYSQFFHLYQNSPLLTVNADEL DLQGNDEHFQLLLNALNDLQGTRNYLNLSER >gi|257257244|gb|ACDX02000007.1| GENE 60 66023 - 66460 584 145 aa, chain + ## HITS:1 COG:NMA0963 KEGG:ns NR:ns ## COG: NMA0963 COG1225 # Protein_GI_number: 15793920 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Neisseria meningitidis Z2491 # 3 145 25 167 167 271 88.0 3e-73 MTQYRFTLPSSSGNDFDSAEHLPLIVYFYPKDSTPGCTTEGLDFNARLPQFKELGYTVVG ISRDGVKSHQNFCAKQGFNFELLSDKDETVCKMFDVIKLKKLYGKESLGIERSTFVLDAN GEIIHEWRKVKVAGHAQEVLETLSR >gi|257257244|gb|ACDX02000007.1| GENE 61 66539 - 67414 1178 291 aa, chain + ## HITS:1 COG:NMB0751 KEGG:ns NR:ns ## COG: NMB0751 COG4974 # Protein_GI_number: 15676649 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinase XerD # Organism: Neisseria meningitidis MC58 # 1 291 1 291 291 397 69.0 1e-110 MTDELIDKLLESLWLQDRLSHNTLQGYRRDLEKIAARLEEGGYTWLNAEVADLADAVYAA DEKHSSQARALSACKRLYAWLEETERRTDNPTRFLKAPKQTQKLPTLITEAQIEKLLAAP DTETPHGLRDKALLEVMYATGLRVTEAVKLQLGDLDLNRGCIRTIGKGDKLRIVPMGEEA VYWVERYCAESRPLLLKNKICDEVFVSQKRSGISRQLAWMIVKNYAETAGITSLSPHGLR HAFATHLVNHGVDLRAVQLMLGHANINTTQIYTHVANIRLKNIVDEHHSRN >gi|257257244|gb|ACDX02000007.1| GENE 62 67659 - 67859 282 66 aa, chain + ## HITS:1 COG:NMA0965 KEGG:ns NR:ns ## COG: NMA0965 COG2906 # Protein_GI_number: 15793922 # Func_class: P Inorganic ion transport and metabolism # Function: Bacterioferritin-associated ferredoxin # Organism: Neisseria meningitidis Z2491 # 1 66 1 66 66 82 80.0 2e-16 MFVCICNAITDHEIKETIAAGASTMSDLQAQLGVATCCGCCSELAASFLNINNAQTTITA GINVQS >gi|257257244|gb|ACDX02000007.1| GENE 63 68022 - 68276 192 84 aa, chain + ## HITS:1 COG:NMA0966 KEGG:ns NR:ns ## COG: NMA0966 COG0526 # Protein_GI_number: 15793923 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Neisseria meningitidis Z2491 # 1 76 1 76 77 117 77.0 7e-27 MKLTLMFREYCSLCHKMREQLKPYQERFGFELEILDVDEDPVFEEKYNELVPVLLDGQTE ICHWFLDEEKLKTFLETKCNGYNG >gi|257257244|gb|ACDX02000007.1| GENE 64 68812 - 69675 869 287 aa, chain - ## HITS:1 COG:NMB0756 KEGG:ns NR:ns ## COG: NMB0756 COG1091 # Protein_GI_number: 15676654 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-4-dehydrorhamnose reductase # Organism: Neisseria meningitidis MC58 # 1 280 1 280 306 385 70.0 1e-107 MRTLLTGSKGQLAHCFRDRLPDNWELIATDSSSLDITDADAVRNMVQSFQPDAIVNTAAY TAVDRAETNVPAAFAVNAAAVHNLADAARSVHARFIHISTDYVFDGTSKTPYREHDYTNP QSVYGRTKAAGELLALAANPESTIIRTSWLFSEYGNNFVKTMLRLAKERDSLSVVNDQIG CPTYAGDLAQAIITLLQHPSPSKGIYHFGGNKSVTWYEFSQAIFQTALKHDNNFKMPKLT PITTDQYPLPAPRPEYSIMDCRKIENDYGIKPSDWQKALNDIIGKLD >gi|257257244|gb|ACDX02000007.1| GENE 65 70181 - 71614 1347 477 aa, chain + ## HITS:1 COG:alr7304_2 KEGG:ns NR:ns ## COG: alr7304_2 COG2931 # Protein_GI_number: 17233320 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: RTX toxins and related Ca2+-binding proteins # Organism: Nostoc sp. PCC 7120 # 197 427 579 811 1125 164 45.0 5e-40 MTYHYGGYSSKAHFNSYCPPVKSYNPYCPPSHGGFGYKGSFHNYGSSHGIKVHHGKIGHG AYCPPPKVAYKCVVIKFDCNPGKPYYPKPAPKPVPPKNVDPYCPPVEPQKPQPQPQPKPQ PQPQPKPQPQPQPQPQPQPKPQPQPKPQPKPNDKDCKDCVDDHNQNNTYGNVDKNPGNII HVDGSTKDKKGATKTVGTDKKDTIYGTSGEDVIYGGDGADVIYGGDGNDTLQGGNNGDSL YGQGGKDYLQGGDGNDYLNGGADADIMRGGDGNDVYFVDHKGDEVIEYGNLNGGIDTVRS VIDYTLTDNVEHLFLQGSGNLNGTGNALNNDINGNSGDNHLYGLAGDDCLVGKDGNDYLD GGIGNDVLIGGTGNDTYFFDKGYGRDTIQDESGNDTLQFGKGISASDVLLSKSGNNLTVS VGNSDSVTIDDWFSGNNHKIENFKFADGSTYEVTGHGDYYSLSAVNSIQQQTQVPNI >gi|257257244|gb|ACDX02000007.1| GENE 66 71785 - 72651 996 288 aa, chain + ## HITS:1 COG:NMA0968 KEGG:ns NR:ns ## COG: NMA0968 COG0152 # Protein_GI_number: 15793925 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase # Organism: Neisseria meningitidis Z2491 # 1 287 1 287 287 539 91.0 1e-153 MSEISLKKIYSGKVRDLYEIDSKRMLMVASDRLSAFDVILDNPIPGKGEILTQISNFWFK KLAHIMPNHFTGDTVYDVLPEHEAKVIEKRAVVAKKLTPVKVEAIVRGYLAGSGWKDYQK NGSVCGIKLPEGMKEAQQLPEVIFTPSTKAAVGDHDENISFEECERIIGKELAAEVRAKA IQLYTEAAEYAKSRGIIICDTKFEFGLDENGTLTLMDEVLTPDSSRFWPADQYQVGTNPP SFDKQFVRDWLEQSGWNKKAPAPEVPSDVIQKTVDKYREALNLLTKES >gi|257257244|gb|ACDX02000007.1| GENE 67 72891 - 75011 1956 706 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|62291006|ref|YP_222799.1| polynucleotide phosphorylase/polyadenylase [Brucella abortus bv. 1 str. 9-941] # 1 701 1 701 714 758 57 0.0 MFDKHVKTFQYGNHTVTLETGEIARQAAAAVKVSMGDTVVLVAVTTNKEVKEGQDFFPLT VDYLERTYAAGKIPGGFFKREGKQSEKEILTSRLIDRPIRPLFPEGFYHDIQIVAMVVSV DPEIDSDIPAMLGASTALVLSGVPFAGPIGAARVGYVNGVYVLNPTKAELAKSKLDLVVA GTSKAVLMVESEAKILSEDVMLGAVVYGHDQMQVAINAINEFADEVNPEVWDWKAPETNE ELVAKVREIAGEAIKEAFKIRQKQARSAKLDEAWNAVKGALITEETDTLAANEIKGIFKH LEADVVRTQILEGQPRIDGRDTRTVRPLNIQTGVLPRTHGSALFTRGETQALAVATLGTS RDEQIIDALSGEYTDRFMLHYNFPPYSTGEVGRVGAPKRREIGHGRLAKRALVAVLPSPE EFSYTMRVVSEITESNGSSSMASVCGGCLSLLSAGVPLKAHVAGIAMGLILDNNKFAVLT DILGDEDHLGDMDFKVAGTTEGVTALQMDIKIQGITKEIMQIALAQAKDARLHILEQMKA AVAGPQELSAHAPRLFTMKINQDKIRDVIGKGGETIRAITAETGTEINIAEDGTITIAAT TQEAGDAAKKRIEEITAEVEVGKVYEGTVVKILDNNVGAIVSVMPGKDGLVHISQIAHER VRNVSDYLQVGQVVNVKALEVDDRGRVRLSIKALVEAPAREEKAPE >gi|257257244|gb|ACDX02000007.1| GENE 68 75237 - 75713 754 158 aa, chain - ## HITS:1 COG:NMA1643 KEGG:ns NR:ns ## COG: NMA1643 COG0782 # Protein_GI_number: 15794537 # Func_class: K Transcription # Function: Transcription elongation factor # Organism: Neisseria meningitidis Z2491 # 1 158 1 158 158 246 94.0 1e-65 MQKIPLTVRGAELLKQELQRLKSVARPEIIEAIAEARSHGDLSENAEYEAAKEKQGFIEG RISELEHKLSMAHIINPAEIHAEGKIVFGTTVTLEDLETEEHVTYQIVGEDEADIKEGKI YVGSPIARALIGKEEGDVAEVQAPGGVREYDIISVQYI >gi|257257244|gb|ACDX02000007.1| GENE 69 75911 - 79051 3206 1046 aa, chain - ## HITS:1 COG:NMB1067 KEGG:ns NR:ns ## COG: NMB1067 COG1674 # Protein_GI_number: 15676951 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Neisseria meningitidis MC58 # 180 1038 175 1008 1014 887 61.0 0 MLWSVLIIILLLAIGIVFLLHKKQEQDWERELVRLKRGRDFDENPDEAYGLAEEAKTAGN KTIARLRLLAAQHDYKKRTQTLSDDSSFSPSSLAEAMGAFQVSPSVQEDEADSSPTYETS SETDFEPEYLHEPEFPATRDNPLPKVRPNAHKPEQYPEIVPFETSDTPEYTPGLVTGGSF EEITLEEATRSLTEAAVQEWEEHQTAKQNPVAITAESEPEIRLVRTSVTPMKGLEVIDFN DPVLRRTRERVKSYVDSIHLEKAGRPHIETAQTALRTAERESIPSTANYYGQKDEINVID IQNNLAMRRAARDKLAAAVAPVRGYQPQIIEDEDIFANLKLPANRRRTLKHSEAAAEKMT RRQLSQQEAESVEKSTAKPTSSFTARSPAPVFSRKAAVPAKLSRAVRENTFISRPPAPDA TVIEPPPVPPVPAPAVDIPKPPQFDLPENKIDIPEPPVFRNHPSVSVFESEVNAHISNNP EISIHDYLIRESASDTINDVDSKADNDTVDVFGRGLPHEQTSSENIETNETPWFDGDDDW DAASDDLTDPQTNSIHLPTTALLLPPQFDPAATQTEEELLNNSITIEEKLAEFKVKVKVV DSYSGPVITRYEIEPDVGVRGNSVMNLEKDLARSLGVASIRVVETIPGKTCMGLELPNPK RQMIRLSEIFNSPAFTESKSKLTLALGQDITGQPVVTDLGKAPHLLVAGTTGSGKSVGVN AMILSMLFKATPEDVRMIMIDPKMLELSIYEGIPHLLAPVVTDMKLAANALNWCVNEMEK RYRLMSHVGVRNLAGFNQKIMEAAAQGMKIANPFSLTPDNPEPLEKLPFIVVVVDEFADL MMTAGKKIEELIARLAQKARAAGIHLILATQRPSVDVITGLIKANIPTRIAFQVSSKIDS RTILDQMGAENLLGQGDMLFLPPGTGYPQRVHGAFASDDEVHRVVEYLKQFGEPDYIEDI LMSGTTDDLPGISRSSDSEVDPMYDEAVSVVLKTRKASISGIQRQLRIGYNRAARLIDQM EADGIVSPAETNGNRTVLAQSSEHLD >gi|257257244|gb|ACDX02000007.1| GENE 70 79200 - 79877 336 225 aa, chain + ## HITS:1 COG:NMB1066 KEGG:ns NR:ns ## COG: NMB1066 COG3235 # Protein_GI_number: 15676950 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis MC58 # 1 225 1 225 226 231 62.0 7e-61 MLFQTGWFSGLILAAAWCVLVLLLVLSAPKAYRDFRKHGSAAALAGIILASVWSLNATPD GGQLAGMSYHLLAVNLIALMLGVPLAFWVCALLYLPYVWIFGSDWQAYPVNALALFLPAL AVNLLSRAWVNRLPANIFIFIFVNGFLASAAGMLLTGGVLVGILDRVRAFPETALWSTAF PVFFLIAWAEAFLSGITAAIFIALRPQWINTFDDGRYLKPSNKIW >gi|257257244|gb|ACDX02000007.1| GENE 71 79934 - 81706 2391 590 aa, chain - ## HITS:1 COG:STM2948 KEGG:ns NR:ns ## COG: STM2948 COG0369 # Protein_GI_number: 16766254 # Func_class: P Inorganic ion transport and metabolism # Function: Sulfite reductase, alpha subunit (flavoprotein) # Organism: Salmonella typhimurium LT2 # 1 590 10 599 599 573 53.0 1e-163 MTPANPLPAELSAQLAALSPTQLAWLSGYCWAQSQGAAGGLGVSAAPAVAAPARRVLVLS ASQTGNARGVAESLHAKLKAAGVEAVLSSASEFKSKTLPDEDIVLLVTSTQGEGEPPEEA LPLYKFVFGKKAPDLGKLTFAVLGLGDSSYPNFCQAGKDFDAKFAELGARRLNDLGICDL EFQSAADAWVEAVVPKVAELAAQAAAPTATPAANQTAGAVYTKDKPYAATLSARQKITSR SAEKDVEHIEIDLSGSGLHYQAGDALGVLPLNDPALVQEILDLHQLSGEEKIRLSDDLET DIRTALTEFADITQNTPALVQQYAELSGSEALKTTAADKTRLDAYLAATPPVGVFAAHPH PLDAQTLFQLFRSQTPRLYSIASAQDEVGEEVHLTVGVVRFEHHGNTYTGAASGYLGERL EEGSEVRVFVEPNPNFRLPADGNIPVIMIGAGTGIAPFRAFMQQRAANGDSGKNWLIFGN QRLADDFLYQLEWIDYRKDGILTRADLAWSRQGERKVYVQHKITEHAAEVWNWLQQGAHL YVCGDATRMARDVETALLDVIETQGKLSRDDAEDYLNEMREDKRYQRDVY >gi|257257244|gb|ACDX02000007.1| GENE 72 82220 - 83602 2370 460 aa, chain - ## HITS:1 COG:NMA1001 KEGG:ns NR:ns ## COG: NMA1001 COG1109 # Protein_GI_number: 15793957 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Neisseria meningitidis Z2491 # 1 460 1 460 460 851 91.0 0 MANIARDIFKAYDIRGIVGKTLTNEAAYLIGKAIATRAAEKGITRIALGRDGRLSGPELM EHIQRGFTDSGIDVLNVGMVATPMLYFAAINECGGSGVMITGSHNPPDYNGFKMMLGGDT LAGEAIQELLALIEADKLTASDKKGSVTEKDISGEYHNHIVGHIKLKRPMKIAIDAGNGV GGAFAGKLYKGLGNEVTELFCEVDGNFPNHHPDPSKPKNLQDLIVALKNSDAEIGLAFDG DADRLGVVTKDGNIIYPDRQLMLFAQDVLSRNPSAKVIFDVKSTRLLAPWIKEHGGEPIM EKTGHSFIKSTMKKTGALVAGEMSGHVFFKERWLGFDDGLYAGARLLEILSAFDNPSEVL NSLPQSISTPELNIDLPEGSNGHQVIDELATNAKFEGATEIITIDGLRVEFPDGFGLMRA SNTTPILVLRFEADSDEAIERIQNQFKAVIESNPALKWPL >gi|257257244|gb|ACDX02000007.1| GENE 73 83723 - 84559 1200 278 aa, chain - ## HITS:1 COG:PM1973 KEGG:ns NR:ns ## COG: PM1973 COG2321 # Protein_GI_number: 15603838 # Func_class: R General function prediction only # Function: Predicted metalloprotease # Organism: Pasteurella multocida # 1 276 1 275 275 340 64.0 1e-93 MDWKGREQSQNVEDRRGSSGGGGGKAPGILGIIVVLVGAYYGVDLSGLVGTPSMGTGSTQ TSQLKPQEEAELNELARVVLADTEKAWGSYFKQIGRTYTPTTMVLYNGGTSTACGMGQSA MGPFYCPGDQKVYLDLDFYRDMQTKLNSASDAAFAYVIAHEVGHHVQNLLGILPKVHRIQ QQVGKKEANALSVKLELQADCYAGIWGHYAVNNNIFKAEDITKAMLAAESVGDDRLQKEG QGYVVPDSFTHGSSEQRMAWLKRGLESGDINQCNTFGN >gi|257257244|gb|ACDX02000007.1| GENE 74 84703 - 85137 561 144 aa, chain - ## HITS:1 COG:no KEGG:NMC1129 NR:ns ## KEGG: NMC1129 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 144 1 144 144 191 83.0 1e-47 MTEPKNEMSAEEQAAARKKAKAKIRTIRIWAWVILALLAATALLSQCAMSKPQAKQNIFE SCVKNIPFAEKWQNDLKERGLDSNNSKLAADYCTCMWNKPLDKLSEEQIRSLGKLSPQEQ LDLLGGAQAFEERDKQCVADLKAE >gi|257257244|gb|ACDX02000007.1| GENE 75 85130 - 86437 2180 435 aa, chain - ## HITS:1 COG:NMA1395 KEGG:ns NR:ns ## COG: NMA1395 COG0460 # Protein_GI_number: 15794308 # Func_class: E Amino acid transport and metabolism # Function: Homoserine dehydrogenase # Organism: Neisseria meningitidis Z2491 # 1 435 1 435 435 755 96.0 0 MKPVNIGLLGLGTVGGGTAAVLQDNAAEISRRLGREVRISAVCDLSEEKARQICPSAAFV KDPFELVAREDVDVVVELFGGTGIAKDAVLKAIENGKHIVTANKKLLAEYGNEIFPLAEE KNVMVQFEAAVAGGIPIIKALREGLAANRIRSIAGIINGTSNFILSEMREKGSAFADVLK EAQALGYAEADPTFDIEGNDAGHKITIMSALAFGTPMNFSACYLEGISKLDSRDIKYAEE LGYRIKLLGITRKTDKGIELRVHPTLIPESRLLANVNGVMNAVRVNADMVGETLYYGAGA GALPTASAVVADIIDIARLIEANTDHRVPHLAFQPAQVQAQTILPMDEITSSYYLRVQAK DEPGTLGQIAALLAKENVSIEALIQKGVIDQTTAEIVILTHSTVEKNVKRAIAAIEALSC VEKPITMIRMESLHD >gi|257257244|gb|ACDX02000007.1| GENE 76 86835 - 87209 405 124 aa, chain + ## HITS:1 COG:NMB1227 KEGG:ns NR:ns ## COG: NMB1227 COG3737 # Protein_GI_number: 15677099 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis MC58 # 1 122 9 129 131 102 42.0 1e-22 MLIEENKTDETLSLTAYRAGAIEAGGKTYTAPIIWRNGKIEAMNVQTPSELTAADLFQTT SESDSLPEVIIIGTGEKQKFLHPKIAAELAAQGIGLECMNTASACRTLVLLQGEGRSVWA WLWV >gi|257257244|gb|ACDX02000007.1| GENE 77 87361 - 87855 664 164 aa, chain + ## HITS:1 COG:PA2532 KEGG:ns NR:ns ## COG: PA2532 COG2077 # Protein_GI_number: 15597728 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Pseudomonas aeruginosa # 1 164 1 165 165 210 69.0 7e-55 MAQITFHDNPVHTSGDLPAAGQTAPAFSLTAGDLSDKTLADFAGKRKVLNIFPSVDTGVC AQSVRTFNQRASSLDNAVVLCISADLPFAQARFCGAEGLDNVVNLSTFRSSFAADYGVAL TDSSLRGLTARAVVVLDENDKVLHSELVAEIANEPNYDAALAVL >gi|257257244|gb|ACDX02000007.1| GENE 78 87923 - 88087 135 54 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261364747|ref|ZP_05977630.1| ## NR: gi|261364747|ref|ZP_05977630.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 54 1 54 54 90 100.0 5e-17 MADKQKPDAHPSDKFILAMIVMAVFLVIIIGGGFIAVEYFKAHPEVFELKPPAK >gi|257257244|gb|ACDX02000007.1| GENE 79 88087 - 88992 1009 301 aa, chain - ## HITS:1 COG:hemF KEGG:ns NR:ns ## COG: hemF COG0408 # Protein_GI_number: 16130361 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase # Organism: Escherichia coli K12 # 10 297 12 299 299 449 73.0 1e-126 MHTEAVLTVLKNLQNQICAALEQEDGGAVFTREEWTGKLGVGETRVLKNGAVFEQAGVNF SHVKGDKMPASATAHRPELAGAAFEAMGVSLVIHPKNPYVPTSHANVRFFIAYPEGGDPV WWFGGGFDLTPFYPFEEDILHWHTVARDVCAPFGEAVYPEFKKWCDEYFYLKHRSETRGV GGLFFDDLNRWDFDTCLNFIKAVGEGYIEAYLPIVAKRKNTPYGERERDFQLYRRGRYVE FNLVWDRGTLFGLQSGGRTESILMSMPPLVRFEYQYTPEEGSPEARLNEFLTARDWLSEM Q >gi|257257244|gb|ACDX02000007.1| GENE 80 89156 - 90406 1950 416 aa, chain - ## HITS:1 COG:NMB1055 KEGG:ns NR:ns ## COG: NMB1055 COG0112 # Protein_GI_number: 15676940 # Func_class: E Amino acid transport and metabolism # Function: Glycine/serine hydroxymethyltransferase # Organism: Neisseria meningitidis MC58 # 1 416 1 416 416 790 96.0 0 MFSKSVNLAQYDPELAAAIAQEDQRQQDHVELIASENYVSCAVMEAQGSQLTNKYAEGYP GKRYYGGCEHVDIVEQLAIDRVKELFGAEYANVQPHSGSQANQAVYASVLKPGDTILGMS LAHGGHLTHGASVNISGKLYNAIAYGLDENEVLDYAEVERLALEHKPKMIVAGASAYALQ IDWAKFREIADKVGAYLFVDMAHYAGLIAGGEYPNPVPFCDFVTTTTHKTLRGPRGGVIL CRDNTHEKALNSAIFPSLQGGPLMHVIAAKAVAFKEALQPEFKQYAKQVKINAAAMAEEL VKRGLRIVSGRTESHVFLVDLQPMKITGKAAEAALGKANITVNKNAIPNDLEKPFVTSGI RIGSAAMTTRGFNEADARVLANLVADVLENPEDEANLANVRKQITALCDKYPVYGA >gi|257257244|gb|ACDX02000007.1| GENE 81 90539 - 90916 442 125 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261364750|ref|ZP_05977633.1| ## NR: gi|261364750|ref|ZP_05977633.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 125 1 125 125 239 100.0 6e-62 MNTKRPKLSRFAHIYGMNGQFVLLEQHSEWMPVNDADYDNAPALPEGFVFSDEAFYTTDG SVPPLVLPDNIKIFNEEARKLERRRLDALALEELGKNLAAAQAETDLEALLEKIDFHLKQ DNLFR >gi|257257244|gb|ACDX02000007.1| GENE 82 91052 - 92209 1591 385 aa, chain + ## HITS:1 COG:PA4113 KEGG:ns NR:ns ## COG: PA4113 COG2814 # Protein_GI_number: 15599308 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Pseudomonas aeruginosa # 2 363 5 366 396 319 54.0 6e-87 MSANTNKQWLSVIALAVGAFIFNTTEYIPIALLSDIGATFNMPPTEVGIMITVYAWIVAL LSLPLMLATKNIERRKLLLILFAFFTLSHIVSYFARSFEILLVSRIGIALTHAVFWSITA SLAVRVAPQGKGNQALGLLSTGTVMAMVAGIPLGRVIGQHSSWQFSFLLIGLCAAAVMGI LAKNLPLLPSVNTGSLKSLPGLLKRKNLMLLYALTVLLITAHFTAYSYIEPFVLQAGGFA PEQVTIVLSLYGLAGFAASYLFGKWFAKHPRAFLLTSVSVILASTLCLLPLAAYPIAVYA LVFVWGIAIVVLSLGMVSKVLDFASDATDVANSIYSGLYNVGIGGGALLGHYVTVWAGMS NIGFAAAILAAAGLVVCRMLVEMRK >gi|257257244|gb|ACDX02000007.1| GENE 83 92424 - 93737 1625 437 aa, chain - ## HITS:1 COG:NMB1258 KEGG:ns NR:ns ## COG: NMB1258 COG2256 # Protein_GI_number: 15677127 # Func_class: L Replication, recombination and repair # Function: ATPase related to the helicase subunit of the Holliday junction resolvase # Organism: Neisseria meningitidis MC58 # 1 436 1 436 436 803 95.0 0 MSDLFTRQPDAPLAERLRPHTLDDVIGQQHLIGEGKPLRVAVEGGKPHSMLLWGPPGVGK TTLARILAQSFNAQFLPVSAVFSGVKDIREAIDKAEIALQQGRATILFVDEVHRFNKAQQ DAFLPHVESGLLTFIGATTENPSFEVNPALLSRAQVYVLQSLSSDDLKKLIAKVLALPEY RDFTIEADAQELLVNTADGDARRLLNLLEQLLRAADTRRLKTLTAEFLADSLGAQIRRFD KGGESFYNQISALHKSVRGSHPNAALYWFCRMLDGGTDPRYLARRIVRMAWEDIGLADPR AFQIANDAAATFERLGSPEGELALAQAVLYLAAAAKSNAGYKAYNQMRRFVKENASDEVP VHLRNAPTKLMKELGYGREYRYAHDEPNAYAAGESYMPDGLDEPDFYQPVPRGLEIKIGE KLEWLKSLDEEALNKQK >gi|257257244|gb|ACDX02000007.1| GENE 84 93802 - 94047 222 81 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261364753|ref|ZP_05977636.1| ## NR: gi|261364753|ref|ZP_05977636.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 81 1 81 81 149 100.0 5e-35 MENIEPKKRIRCSTTPEQRNNALYGYMAWNLGDTKVFCPPTAENNKGKEEAAKLAEECIV ISGKSLQILNENYIDITPKER >gi|257257244|gb|ACDX02000007.1| GENE 85 94059 - 94679 88 206 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|288575808|ref|ZP_05977637.2| ## NR: gi|288575808|ref|ZP_05977637.2| hypothetical protein NEIMUCOT_05001 [Neisseria mucosa ATCC 25996] hypothetical protein NEIMUCOT_05001 [Neisseria mucosa ATCC 25996] # 1 206 3 208 208 307 100.0 3e-82 MTPYVLFGIIILSTKITDAEYITKLLIFTFLLYATLFCVYVIKPCLLNVKNIKQHIIFPY ILIFIIIPSAMLIYSLIIFFPVTSSWINDIDKQYLFLFIITLLLIFNALLALYYIKSLND QKPNNIYIICILPMIFTIIAIFSISYFTDSLSIRMLYPVRFVEMPKDSSWYLLHNNFQIN NGAQETNGIDKNDLKKLNKFSTALHF >gi|257257244|gb|ACDX02000007.1| GENE 86 95035 - 95364 84 109 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|288575809|ref|ZP_05977638.2| ## NR: gi|288575809|ref|ZP_05977638.2| hypothetical protein NEIMUCOT_05002 [Neisseria mucosa ATCC 25996] hypothetical protein NEIMUCOT_05002 [Neisseria mucosa ATCC 25996] # 51 109 1 59 59 124 98.0 3e-27 MIDRHFYHAAANPRTAAQTTERRVRIISATTQQRRHRSNGNNLFHIHSHPLPQGRLKRPA KSLNKRVLYRKRCEMGDWGGWGIIEEILDKLFGTRRFLECQKNVNCILN >gi|257257244|gb|ACDX02000007.1| GENE 87 95218 - 95601 265 127 aa, chain + ## HITS:1 COG:no KEGG:NGK_1216 NR:ns ## KEGG: NGK_1216 # Name: not_defined # Def: lipoprotein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 5 127 1 122 122 152 60.0 3e-36 MAMNMKKIVAVASVAALLGGCAYDSDSAFGGLGGGTGIGGSVVKMAVDHQCRSELNKRNE WRLVALTMSADKQREWEDKICGCASEEAPNQVSAQELMDVLNPSSRDRAIASVTVKTVNA CFKRLYR >gi|257257244|gb|ACDX02000007.1| GENE 88 95752 - 97164 1569 470 aa, chain + ## HITS:1 COG:NMA1440 KEGG:ns NR:ns ## COG: NMA1440 COG0498 # Protein_GI_number: 15794345 # Func_class: E Amino acid transport and metabolism # Function: Threonine synthase # Organism: Neisseria meningitidis Z2491 # 1 468 1 468 469 910 94.0 0 MKYISTRGETAHKPFSEVLLMGLAPDGGLMLPEHYPQVSRETLDKWRGLSYPELAFEVMS LFVTDIPADDLRDILNRTYTEAAFGSKEITPVRTLSDGIKIQALSNGPTLAFKDMAMQFL GNAFEYVLNKKGRELNILGATSGDTGSAAEYALRGKKGVNVFMLSPDGKMSAFQRAQMYS LQDENIHNIAVKGMFDDCQDIVKAVQNDAAFKEKYHIGTVNSINWGRIVAQVVYYFAGYF KATQSNDEQVSFCVPSGNFGNVCAGHIAKQMGLPIRRLIVATNENDVLDEFFKTGAYRPR NSEHTYVTSSPSMDISKASNFERFVFDLMDRDPQEINTLWAEVAAGKGFDLQFALEKVGG KYGFTSGKSTHANRLATIKQVYEQDKELIDPHTADGVKVAREVREEGETVVCLETALAAK FDATIREAVGDVAIPRPAALEGLENLPQRVRVVPNNAAAVKEIIRETLDK >gi|257257244|gb|ACDX02000007.1| GENE 89 97375 - 98151 1308 258 aa, chain + ## HITS:1 COG:NMA1442 KEGG:ns NR:ns ## COG: NMA1442 COG1018 # Protein_GI_number: 15794347 # Func_class: C Energy production and conversion # Function: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 # Organism: Neisseria meningitidis Z2491 # 1 258 1 258 258 531 98.0 1e-151 MAAFNTQKVLSVHHWTDAYFTFTCTRDESLRFENGQFVMVGLMVDGKPLMRAYSVASANW EEHLEFFSIKVQDGPLTSRLQHLKVGDEVLISKKPTGTLVAGDLNPGKHLYLLSTGTGIA PFLSITKDPEIYEQFEKIILVHGVRYKKDLAYYDRFTKELPEHEYLGDLVKEKLIYYPIV SREDYEHHGRLTDLMVSGKLFEDIGLPKINPQDDRAMLCGSPAMLKDTCKVLDDFGLTVS PKTGVRGDYLIERAFVDQ >gi|257257244|gb|ACDX02000007.1| GENE 90 98497 - 98697 229 66 aa, chain + ## HITS:1 COG:no KEGG:NMO_0909 NR:ns ## KEGG: NMO_0909 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 1 52 1 52 60 97 82.0 1e-19 MFWYIIGFCAFVVSLLALWVNASAFGMQDDDTPQSEYEKRLGLGTKLKDKETAAKERAAA RFHPDD >gi|257257244|gb|ACDX02000007.1| GENE 91 98743 - 99423 724 226 aa, chain + ## HITS:1 COG:jhp1180 KEGG:ns NR:ns ## COG: jhp1180 COG0846 # Protein_GI_number: 15612245 # Func_class: K Transcription # Function: NAD-dependent protein deacetylases, SIR2 family # Organism: Helicobacter pylori J99 # 1 223 1 225 234 202 46.0 3e-52 MKKCVVLTGAGISADSGLLTFRDAGGLWEGHRVTDVCTPEALARNPKLVIDFYNQRRLQA NAAEPNAAHLALVKLAQYYDVHIITQNVDGLHEKAGSSKVLHLHGELNKLRSTVDEDEII EFTGEQTDDVRDSQGNPMRPHIVFFGEQVPMFDAAVEEMRDADVVMIVGTSMQVYPAASL IHYAPPDAERYLVDPNPQGVGADVEVIPKRAAEGVPALVEYLIGRV >gi|257257244|gb|ACDX02000007.1| GENE 92 100067 - 100498 259 143 aa, chain + ## HITS:1 COG:no KEGG:NMCC_1947 NR:ns ## KEGG: NMCC_1947 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_053442 # Pathway: not_defined # 1 136 1 136 136 235 89.0 4e-61 MTTYTIPRKDHQFLYIIEGSLLSYTLKNDELHIIVNCVDYPDFPQEIPMPNYSEWVRIKF KQFSYLKFIYVYATKSQDKKIKNVLELGELKQDDEILDYGGTLELIGGRYDLPTGFSIDI VCREIELEFLDQESFNYTSHGYI >gi|257257244|gb|ACDX02000007.1| GENE 93 100626 - 102620 3035 664 aa, chain - ## HITS:1 COG:NMB1442 KEGG:ns NR:ns ## COG: NMB1442 COG0323 # Protein_GI_number: 15677300 # Func_class: L Replication, recombination and repair # Function: DNA mismatch repair enzyme (predicted ATPase) # Organism: Neisseria meningitidis MC58 # 1 664 1 658 658 1094 87.0 0 MSRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIEVELAGGGIRLIRVSDN GGGIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQDGSAH ATQVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLAL AHPHIAFSLKRDGKQVFKLPAQSLHERIAAIVGEDFQAVSLEIDSGNGALRLYGAIAKPT FAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNVHP TKTEIRFRDSQQVHQLVFHTLNKALADTRADLTESVGNAGEVLHEITGIRPAATSSENEH NQFLQNPTASSETIFAAVPNTHVSEPRNSFSSGKIAPMPYQAARAPQQRSLSLRESRAAL NTYAELFKNTAADEADIELAQFEQARFGSTSATSSETPAHTFSDDPKPELPPLGFAIAQL LGIYILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGNLQSQRLLIPVTFAASHEECAT LADHADTLAGFGLELSDMGGNTLAVRAVPAMLGKADVVSLAKDVLGELAQVGSSQTIEEH ENHILATMSCHGSVRAGRQLTLPEMNALLRDMENTPRSNQCNHGRPTWVKLTLKELDALF LRGQ >gi|257257244|gb|ACDX02000007.1| GENE 94 102718 - 104055 2045 445 aa, chain - ## HITS:1 COG:NMA1429_1 KEGG:ns NR:ns ## COG: NMA1429_1 COG0108 # Protein_GI_number: 15794338 # Func_class: H Coenzyme transport and metabolism # Function: 3,4-dihydroxy-2-butanone 4-phosphate synthase # Organism: Neisseria meningitidis Z2491 # 82 285 1 204 204 385 95.0 1e-107 MNTTDLRRRNLRQWIADKYGGQQTRFAEAIAINQGELSALLKNKSFGEKKARKIELAAQM PAMWLDQEHASAQPDHQERRTMPHISSIPEILADIKAGKMVIITDAEDRENEGDLLMAAQ FVTPEAINFMIKHARGLVCLPMEGSMVERLGLPMMTQKNGAQYGTNFTVSIEAAQGITTG ISAADRALTIQTAVSPTAKPEDIVQPGHIFPLRAQKGGVLVRAGHTEAGVDLAQMNGLIP AAVICEIINDDGTMARMPELIKFAEEHNLKIGTITDLIEYRSRTESLLEDMGNSPVQTPW GEFQQHVYVDKLSGETHLALVKGTPTADTETLVRVHEPFSVMDFIQANPRHSWSLPKALE RIQQAESGVVILLHRTEDGATLLDRTLPKGANQAYKWDSKSYGIGAQILAGLNVGKLRVL GQPSAFTGLTGFGLEVVGFEEAENK >gi|257257244|gb|ACDX02000007.1| GENE 95 104276 - 104878 747 200 aa, chain + ## HITS:1 COG:no KEGG:Pcryo_0464 NR:ns ## KEGG: Pcryo_0464 # Name: not_defined # Def: hypothetical protein # Organism: P.cryohalolentis # Pathway: not_defined # 34 199 53 239 255 149 41.0 8e-35 MKMVYRLILISVFCAVAAAGGWFYAQHRNDNAHEAISREGVLMQIKQMNRLESTAFYIDT IIRTEKKGDWRRLWQDSQSGLFIVRGKVLAGLDLDKLHADNVNIVDGKVLISLPPVEILS VDLENIEVYDIQTGSFNLLPVDKAVFKTVQDEAKKQVLASACKAQILDHANRQAQTQLEN LFALTQTQVSVYPAAVGQCN >gi|257257244|gb|ACDX02000007.1| GENE 96 105061 - 105900 628 279 aa, chain + ## HITS:1 COG:NMB0822 KEGG:ns NR:ns ## COG: NMB0822 COG0501 # Protein_GI_number: 15676720 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Zn-dependent protease with chaperone function # Organism: Neisseria meningitidis MC58 # 1 279 69 347 347 467 85.0 1e-131 MKRVFLFLVTNIAVLVVIRIILAVLGINSTDQVGSLLAYSAVVGFTGSIISLLMSKTIAK NSVGAEVIVQPRSEEEAWLLSTVEAQARQWSLKTPEVAIYHSPEPNAFATGATRNSSLVA VSTGLLDHMTRDEVEAVLAHEMAHVGNGDMVTLTLIQGVVNTFVVFLARVVSGMVARNND GSTSQGTYFMVSMVLQIVFGFLASIIVMWFSRQREYRADAGAAKLVGAHKMIAALQRLKG STSDLPEQMNAMGIASDAKDSLLSTHPSLDNRIARLKNL >gi|257257244|gb|ACDX02000007.1| GENE 97 106030 - 106785 401 251 aa, chain + ## HITS:1 COG:NMA1693 KEGG:ns NR:ns ## COG: NMA1693 COG0496 # Protein_GI_number: 15794586 # Func_class: R General function prediction only # Function: Predicted acid phosphatase # Organism: Neisseria meningitidis Z2491 # 1 246 1 246 248 407 76.0 1e-113 MNILISNDDGYSSQGIAILARVAAEFANVRIVAPERDRSGVSNSLTLDRPLQMKQAANGF YYVDGTPTDCIHVGCHVLSDFKPDLVLSGINNGANMGDDTLYSGTVAAATEAFLMGIPAV ALSLNDTRGRYWQTAEQAAWMILERLLKNPPTMPVLWNINIPAVPPDAVQGIKTTRLGRR HHEQSVIPMKNPRGESIYWIGPVGDISDREQGTDFGECESGFITVTPLQIDLTSYRHMDV VSGFWQDGKEG >gi|257257244|gb|ACDX02000007.1| GENE 98 106960 - 107856 936 298 aa, chain + ## HITS:1 COG:NMB1483 KEGG:ns NR:ns ## COG: NMB1483 COG0739 # Protein_GI_number: 15677336 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Neisseria meningitidis MC58 # 83 298 176 415 415 261 65.0 8e-70 MLKKTAFYAAFALTLGACTSQQPAPVVVGNAGSGTSSNPYGATPYGTNAPAANDAPYTPP SAPAANSSYTPPVSGGAYVPSYAPVDINAATHTVVRGDTVYNISKRYHITQDNLREWNGL TDNNISVGQNLRVKPAGYTAPASTAAAKPSYSAPTSVAKPAPAPLNTPTVATGATRTVSG ITWQRPTNGNVLANFGGSNKGVDIGGNAGQPVVAAADGKVVYAGSGLRGYGNLVIIQHNS SFLSAYGHNQRLLVNEGQNVKRGQTIAQMGNTDANRTQLHFEVRQNGKPVNPATYIAF >gi|257257244|gb|ACDX02000007.1| GENE 99 108116 - 108454 275 112 aa, chain + ## HITS:1 COG:no KEGG:DNO_0103 NR:ns ## KEGG: DNO_0103 # Name: not_defined # Def: hypothetical protein # Organism: D.nodosus # Pathway: not_defined # 1 95 1 95 98 101 55.0 1e-20 MKQYTLDPKALLGGVISSDADQEIVQLSLQKDNEIPPYEADAIILLIVLNGSAQISTSSE TLHTEGLQIVRLEPGETHSIRALEDYTNILVIKQLTYVAGLNKKLRFGKCCL >gi|257257244|gb|ACDX02000007.1| GENE 100 108605 - 109717 1437 370 aa, chain + ## HITS:1 COG:PM1981 KEGG:ns NR:ns ## COG: PM1981 COG0842 # Protein_GI_number: 15603846 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Pasteurella multocida # 2 369 3 373 374 337 49.0 2e-92 MRTLKNILTLMLKEFRSVLTDPVLMVLIAYIFTATIYQMAQVGADLKNATVGIIDQDRSV LSMRIRDAVQHPFFKQVEDVRREDSDELMDKGEFTFILEVPPNFQRDMAAGRNPDLQLLV DATSMTQAGVGASYLSQIINREIYEFTGVTRPELINPVINTYYNPNGESAWFMPTSQIGS MSCMLLILLTGAAVIRERERGTIEHLLVMPVNAFELMMGKVLANAAVIWVAALSSLWFIV HLSIGVPLIGSVPLYAVGLALFLFSVASLGIMIATFASTMGQFGMLMLPVYIVMNLFAGG ASPRSNMPHAAQLISEYWPLTQFVKFSQDILFRGAGIEIVWGHMLIMGCIGVGFLWLALL RFQGMLERQG >gi|257257244|gb|ACDX02000007.1| GENE 101 110120 - 111574 1652 484 aa, chain + ## HITS:1 COG:PM1980 KEGG:ns NR:ns ## COG: PM1980 COG1538 # Protein_GI_number: 15603845 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Outer membrane protein # Organism: Pasteurella multocida # 17 482 14 460 463 331 42.0 2e-90 MKFNQIHLLCIAAVLAIAACKNTEVPLNSQVELPETFTQDAAAKGDADIGAWWQQWNDPV LSGLIAQGLAQGHDVKIAVSRLNEARAVAGAARADLGPTVGLSGKVGANYSKMDNPLDSN ARALLSRYPQASSLNGDTIDSQSTTLYGGLTASWEPDIFGKKRSDADAARYAALGQQELA YGAQMLVAGDIADNYFKARAAQGRLKTADQTVATLRRMVRYIEGRFKAGHVSGYEVNEAK VQLTAAEAKRATIGAEYAAYVRSIAVLTGNMPQTFTLPESSVDALAHQPSAPSGQTPQGL LERRPDLRAQAAQVNAYAAKFASAKADLLPRFTISFMGQGGRIGVDGDRSLTGWASLLSV GIQTPLFTNGRIKANIKAADARLQTALLEYDKRLLTALGEVDSAYQGVESLSRQTELLQT AHNQAARHATDTEKMFRNGYKTLDVALKAHIAEGQMQENLISARLARAQMLVSLYKALGG GWSK >gi|257257244|gb|ACDX02000007.1| GENE 102 111627 - 112835 768 402 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 4 398 14 419 447 300 38 2e-80 MNQLKLAVSGAQILFVAFGAMVLVPLLTGLNPALALLGAGIGTLLFQLVTRRKVPIFLGS SFAFIAPIIYSIGEWGLPSTMFGLFAAGFMYFVFAGLIRWRGLAAVHRLLPPVVIGPVIM VIGLSVAAAASSMAMGQADGKQVIDYADSLILSGFTFAVTVVVSVFGSRMMKLVPILIGV ASGYTLALIMGLVDTAAIVNAPWFAVPHFETPQVNWQAALFMLPVAIAPAIEHIGGIMAI GNVTGQNYTKDPGLDKTLAGDGLGVCVAGLIGGPPVTTYGEVTGAVMITKNSNPVIMTWA AIFAIAMAFFGKFNAFLASIPMPVMGGIMLLLFGTIASLGVKTLIDSKVDLMLPKNLVIV SSVLTTGIGGMVIKIGTLSFAGVGLCAILAIILNILLPDREQ >gi|257257244|gb|ACDX02000007.1| GENE 103 113528 - 113833 140 101 aa, chain + ## HITS:1 COG:no KEGG:NGK_0259 NR:ns ## KEGG: NGK_0259 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 3 101 1 99 156 69 36.0 5e-11 MKLKYYIISLFFSLFFILLAFIFISPYGLNFKGKEQSFNEATILISFPNRGEKKIKFEAG LRSYWLSCYGLDDLCKMENLNKKFPIINAKILLLKLMRQTF >gi|257257244|gb|ACDX02000007.1| GENE 104 113874 - 114194 399 106 aa, chain - ## HITS:1 COG:SP1928 KEGG:ns NR:ns ## COG: SP1928 COG3293 # Protein_GI_number: 15901752 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 5 103 24 124 129 81 47.0 3e-16 MGAQHDMRLARRHLTELYPYKIVIADKGYQGLAKTGLQTPKKKSKHHLLNKQDKEANRRL GKLRTVIEHINRKLKIFKILSLPYRNRRKRFGLRANLIAGLINAMG Prediction of potential genes in microbial genomes Time: Sat Jul 16 23:57:20 2011 Seq name: gi|257257242|gb|ACDX02000008.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont7.1, whole genome shotgun sequence Length of sequence - 110001 bp Number of predicted genes - 124, with homology - 124 Number of transcription units - 55, operones - 29 average op.length - 3.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 11/0.000 + CDS 3 - 185 265 ## COG2801 Transposase and inactivated derivatives 2 1 Op 2 . + CDS 200 - 499 196 ## COG2801 Transposase and inactivated derivatives + Term 702 - 748 12.1 - Term 689 - 735 12.1 3 2 Op 1 . - CDS 764 - 1546 935 ## COG0134 Indole-3-glycerol phosphate synthase - Prom 1568 - 1627 5.0 - Term 1608 - 1651 11.1 4 2 Op 2 . - CDS 1672 - 2103 558 ## gi|261364778|ref|ZP_05977661.1| late embryogeneis abundant protein - Prom 2308 - 2367 79.6 + TRNA 2289 - 2364 91.3 # Lys TTT 0 0 + Prom 2291 - 2350 80.0 5 3 Op 1 . + CDS 2506 - 3948 2356 ## COG1012 NAD-dependent aldehyde dehydrogenases + Term 3978 - 4025 7.6 + Prom 4002 - 4061 3.4 6 3 Op 2 . + CDS 4127 - 5638 2402 ## COG1190 Lysyl-tRNA synthetase (class II) + Term 5659 - 5708 13.8 + Prom 5775 - 5834 5.8 7 4 Op 1 22/0.000 + CDS 5861 - 6565 724 ## COG0850 Septum formation inhibitor 8 4 Op 2 22/0.000 + CDS 6593 - 7408 1161 ## COG2894 Septum formation inhibitor-activating ATPase 9 4 Op 3 2/0.211 + CDS 7412 - 7687 432 ## COG0851 Septum formation topological specificity factor 10 4 Op 4 . + CDS 7691 - 8611 1311 ## COG0583 Transcriptional regulator + Term 8635 - 8676 1.0 - Term 9150 - 9202 14.6 11 5 Op 1 3/0.105 - CDS 9225 - 10034 1390 ## COG0289 Dihydrodipicolinate reductase 12 5 Op 2 . - CDS 10050 - 10433 530 ## COG2913 Small protein A (tmRNA-binding) - Prom 10599 - 10658 5.1 + Prom 10454 - 10513 4.8 13 6 Op 1 . + CDS 10644 - 11078 612 ## COG0735 Fe2+/Zn2+ uptake regulation proteins + Term 11101 - 11152 14.2 14 6 Op 2 . + CDS 11199 - 11924 676 ## COG2360 Leu/Phe-tRNA-protein transferase + Term 12156 - 12204 14.1 - Term 12143 - 12193 13.6 15 7 Tu 1 . - CDS 12251 - 12712 484 ## COG1490 D-Tyr-tRNAtyr deacylase - Prom 12815 - 12874 1.6 - Term 12784 - 12829 8.1 16 8 Op 1 3/0.105 - CDS 12908 - 13780 1025 ## COG0760 Parvulin-like peptidyl-prolyl isomerase 17 8 Op 2 2/0.211 - CDS 13815 - 14084 285 ## COG0271 Stress-induced morphogen (activity unknown) 18 8 Op 3 3/0.105 - CDS 14084 - 14374 468 ## COG2350 Uncharacterized protein conserved in bacteria 19 8 Op 4 . - CDS 14378 - 14908 552 ## COG2917 Intracellular septation protein A - Prom 15046 - 15105 6.5 20 9 Tu 1 . + CDS 15253 - 17715 1674 ## COG3170 Tfp pilus assembly protein FimV + Term 17748 - 17783 5.1 + Prom 17736 - 17795 6.8 21 10 Tu 1 . + CDS 17842 - 18654 533 ## COG0101 Pseudouridylate synthase + Prom 19197 - 19256 4.8 22 11 Tu 1 . + CDS 19353 - 20438 1025 ## COG3203 Outer membrane protein (porin) + Term 20455 - 20501 5.2 23 12 Tu 1 . - CDS 20998 - 21441 487 ## COG0698 Ribose 5-phosphate isomerase RpiB - Prom 21478 - 21537 4.3 - Term 21764 - 21814 14.5 24 13 Tu 1 . - CDS 21835 - 24225 3835 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit - Prom 24330 - 24389 4.6 25 14 Op 1 . - CDS 24445 - 25845 2326 ## COG1760 L-serine deaminase 26 14 Op 2 . - CDS 25871 - 26770 927 ## COG4973 Site-specific recombinase XerC 27 14 Op 3 . - CDS 26773 - 27201 318 ## Dbac_1354 esterase - Prom 27242 - 27301 3.6 + Prom 27318 - 27377 5.0 28 15 Tu 1 . + CDS 27413 - 28477 1913 ## COG0191 Fructose/tagatose bisphosphate aldolase + Term 28495 - 28530 5.1 - Term 29115 - 29153 2.8 29 16 Tu 1 . - CDS 29171 - 29899 1159 ## COG3279 Response regulator of the LytR/AlgR family - Prom 29985 - 30044 7.5 30 17 Tu 1 . - CDS 30086 - 30991 940 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases - Prom 31108 - 31167 4.2 + Prom 31102 - 31161 3.5 31 18 Op 1 20/0.000 + CDS 31183 - 31860 716 ## COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone 32 18 Op 2 3/0.105 + CDS 31857 - 32300 229 ## PROTEIN SUPPORTED gi|117923948|ref|YP_864565.1| SSU ribosomal protein S18P alanine acetyltransferase 33 18 Op 3 . + CDS 32294 - 33133 636 ## COG1573 Uracil-DNA glycosylase + Term 33151 - 33197 9.5 - Term 33351 - 33408 4.2 34 19 Op 1 2/0.211 - CDS 33502 - 34722 2036 ## COG1364 N-acetylglutamate synthase (N-acetylornithine aminotransferase) 35 19 Op 2 23/0.000 - CDS 34805 - 35506 1180 ## COG1346 Putative effector of murein hydrolase 36 19 Op 3 . - CDS 35506 - 35850 573 ## COG1380 Putative effector of murein hydrolase LrgA - Prom 35912 - 35971 4.7 + Prom 35976 - 36035 3.8 37 20 Tu 1 . + CDS 36063 - 36551 787 ## COG2346 Truncated hemoglobins + Term 36731 - 36783 15.0 38 21 Op 1 3/0.105 + CDS 36990 - 37781 902 ## COG0790 FOG: TPR repeat, SEL1 subfamily 39 21 Op 2 2/0.211 + CDS 37711 - 37917 134 ## COG0790 FOG: TPR repeat, SEL1 subfamily 40 21 Op 3 . + CDS 38003 - 39340 1918 ## COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase + Term 39404 - 39451 9.5 + Prom 39408 - 39467 3.7 41 22 Tu 1 . + CDS 39577 - 39879 372 ## COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases + Term 39933 - 39981 8.1 + Prom 40042 - 40101 3.6 42 23 Op 1 31/0.000 + CDS 40158 - 41315 1176 ## COG0772 Bacterial cell division membrane protein 43 23 Op 2 . + CDS 41319 - 42386 1341 ## COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase + Term 42411 - 42463 11.4 + Prom 42436 - 42495 3.7 44 24 Tu 1 . + CDS 42521 - 43348 790 ## COG3315 O-Methyltransferase involved in polyketide biosynthesis + Term 43356 - 43400 12.5 + Prom 43521 - 43580 5.9 45 25 Op 1 11/0.000 + CDS 43614 - 45023 1971 ## COG0773 UDP-N-acetylmuramate-alanine ligase 46 25 Op 2 18/0.000 + CDS 45174 - 46088 963 ## COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes 47 25 Op 3 25/0.000 + CDS 46078 - 46803 564 ## COG1589 Cell division septal protein + Prom 46805 - 46864 3.9 48 25 Op 4 35/0.000 + CDS 46884 - 48128 1808 ## COG0849 Actin-like ATPase involved in cell division + Prom 48242 - 48301 5.3 49 25 Op 5 . + CDS 48353 - 49546 1289 ## COG0206 Cell division GTPase + Term 49564 - 49597 2.1 + Prom 49575 - 49634 8.6 50 26 Tu 1 . + CDS 49835 - 50290 397 ## NLA_19610 hypothetical protein + Term 50304 - 50365 20.2 + Prom 50519 - 50578 5.2 51 27 Op 1 23/0.000 + CDS 50704 - 51504 305 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 51506 - 51553 6.4 + Prom 51553 - 51612 1.9 52 27 Op 2 16/0.000 + CDS 51641 - 52417 815 ## COG0767 ABC-type transport system involved in resistance to organic solvents, permease component 53 27 Op 3 13/0.000 + CDS 52468 - 52965 737 ## COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component 54 27 Op 4 10/0.000 + CDS 53005 - 53595 1087 ## COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component + Prom 53615 - 53674 2.5 55 27 Op 5 3/0.105 + CDS 53694 - 53972 421 ## COG3113 Predicted NTP binding protein (contains STAS domain) 56 27 Op 6 . + CDS 53969 - 54769 1330 ## COG2853 Surface lipoprotein + Term 54776 - 54822 8.7 57 28 Op 1 11/0.000 + CDS 54828 - 55979 1447 ## COG0763 Lipid A disaccharide synthetase + Prom 56399 - 56458 6.2 58 28 Op 2 . + CDS 56523 - 57113 776 ## COG0164 Ribonuclease HII + Term 57131 - 57169 9.5 + Prom 57140 - 57199 3.2 59 29 Tu 1 . + CDS 57315 - 58274 1044 ## COG0385 Predicted Na+-dependent transporter + Term 58297 - 58339 11.2 - Term 58283 - 58325 11.2 60 30 Tu 1 . - CDS 58365 - 59747 1363 ## COG0790 FOG: TPR repeat, SEL1 subfamily - Prom 59770 - 59829 6.7 - Term 59940 - 59990 5.2 61 31 Tu 1 . - CDS 60023 - 60571 866 ## COG1949 Oligoribonuclease (3'->5' exoribonuclease) - Prom 60601 - 60660 4.5 + Prom 60675 - 60734 4.9 62 32 Tu 1 . + CDS 60773 - 61561 1350 ## COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH) + Term 61620 - 61653 -0.6 + Prom 61666 - 61725 6.3 63 33 Op 1 . + CDS 61844 - 62293 831 ## COG1970 Large-conductance mechanosensitive channel + Term 62317 - 62364 10.1 + Prom 62359 - 62418 4.4 64 33 Op 2 . + CDS 62496 - 63326 330 ## UMN179_01048 hypothetical protein + Term 63475 - 63530 15.8 - Term 63462 - 63518 16.0 65 34 Op 1 . - CDS 63543 - 64448 1239 ## COG1281 Disulfide bond chaperones of the HSP33 family 66 34 Op 2 . - CDS 64608 - 66251 2222 ## COG0661 Predicted unusual protein kinase - Prom 66291 - 66350 6.9 + Prom 66231 - 66290 8.2 67 35 Op 1 . + CDS 66467 - 67081 511 ## COG0791 Cell wall-associated hydrolases (invasion-associated proteins) 68 35 Op 2 . + CDS 67106 - 67318 315 ## NMC1979 hypothetical protein + Term 67340 - 67373 4.5 + Prom 67493 - 67552 6.7 69 36 Tu 1 . + CDS 67650 - 69074 751 ## PROTEIN SUPPORTED gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 + Term 69084 - 69115 3.2 - Term 69150 - 69202 12.2 70 37 Op 1 . - CDS 69214 - 69837 988 ## COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division - Prom 69939 - 69998 2.4 71 37 Op 2 . - CDS 70102 - 70449 334 ## CtCNB1_2601 hypothetical protein 72 37 Op 3 . - CDS 70460 - 71458 209 ## PROTEIN SUPPORTED gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit - Prom 71527 - 71586 5.0 + Prom 71775 - 71834 2.0 73 38 Tu 1 . + CDS 72024 - 75056 3855 ## COG1530 Ribonucleases G and E + Term 75104 - 75152 15.1 - Term 75091 - 75139 15.1 74 39 Tu 1 . - CDS 75158 - 75364 132 ## NMC0872 putative integral membrane protein - Prom 75593 - 75652 4.3 + Prom 75579 - 75638 4.5 75 40 Op 1 21/0.000 + CDS 75687 - 76901 1625 ## COG0477 Permeases of the major facilitator superfamily + Term 76916 - 76979 17.2 + Prom 76961 - 77020 6.2 76 40 Op 2 . + CDS 77045 - 78328 1025 ## COG0477 Permeases of the major facilitator superfamily + Term 78349 - 78399 14.5 + Prom 78346 - 78405 3.9 77 41 Op 1 58/0.000 + CDS 78631 - 79275 1066 ## PROTEIN SUPPORTED gi|15676069|ref|NP_273200.1| 50S ribosomal protein L3 78 41 Op 2 61/0.000 + CDS 79275 - 79895 1031 ## PROTEIN SUPPORTED gi|15676070|ref|NP_273201.1| 50S ribosomal protein L4 79 41 Op 3 61/0.000 + CDS 79886 - 80206 507 ## PROTEIN SUPPORTED gi|218767166|ref|YP_002341678.1| 50S ribosomal protein L23 80 41 Op 4 60/0.000 + CDS 80212 - 81045 1448 ## PROTEIN SUPPORTED gi|121634019|ref|YP_974264.1| 50S ribosomal protein L2 81 41 Op 5 59/0.000 + CDS 81051 - 81329 477 ## PROTEIN SUPPORTED gi|15676073|ref|NP_273204.1| 30S ribosomal protein S19 82 41 Op 6 61/0.000 + CDS 81338 - 81667 537 ## PROTEIN SUPPORTED gi|15676074|ref|NP_273205.1| 50S ribosomal protein L22 83 41 Op 7 50/0.000 + CDS 81677 - 82372 1140 ## PROTEIN SUPPORTED gi|225076401|ref|ZP_03719600.1| hypothetical protein NEIFLAOT_01446 84 41 Op 8 50/0.000 + CDS 82356 - 82772 704 ## PROTEIN SUPPORTED gi|225076402|ref|ZP_03719601.1| hypothetical protein NEIFLAOT_01447 85 41 Op 9 50/0.000 + CDS 82772 - 82963 304 ## PROTEIN SUPPORTED gi|15676077|ref|NP_273208.1| 50S ribosomal protein L29 86 41 Op 10 50/0.000 + CDS 82963 - 83226 423 ## PROTEIN SUPPORTED gi|225076404|ref|ZP_03719603.1| hypothetical protein NEIFLAOT_01449 + Term 83249 - 83313 5.4 + Prom 83373 - 83432 5.7 87 42 Op 1 57/0.000 + CDS 83452 - 83820 604 ## PROTEIN SUPPORTED gi|15676079|ref|NP_273210.1| 50S ribosomal protein L14 88 42 Op 2 48/0.000 + CDS 83832 - 84155 522 ## PROTEIN SUPPORTED gi|225076406|ref|ZP_03719605.1| hypothetical protein NEIFLAOT_01451 89 42 Op 3 50/0.000 + CDS 84165 - 84704 904 ## PROTEIN SUPPORTED gi|225076407|ref|ZP_03719606.1| hypothetical protein NEIFLAOT_01452 90 42 Op 4 50/0.000 + CDS 84707 - 85012 504 ## PROTEIN SUPPORTED gi|225076408|ref|ZP_03719607.1| hypothetical protein NEIFLAOT_01453 91 42 Op 5 55/0.000 + CDS 85027 - 85419 625 ## PROTEIN SUPPORTED gi|225076409|ref|ZP_03719608.1| hypothetical protein NEIFLAOT_01454 92 42 Op 6 46/0.000 + CDS 85433 - 85966 873 ## PROTEIN SUPPORTED gi|241759663|ref|ZP_04757764.1| ribosomal protein L6 93 42 Op 7 56/0.000 + CDS 85980 - 86333 561 ## PROTEIN SUPPORTED gi|15676085|ref|NP_273216.1| 50S ribosomal protein L18 94 42 Op 8 50/0.000 + CDS 86351 - 86869 869 ## PROTEIN SUPPORTED gi|225076412|ref|ZP_03719611.1| hypothetical protein NEIFLAOT_01457 95 42 Op 9 48/0.000 + CDS 86862 - 87047 295 ## PROTEIN SUPPORTED gi|225076413|ref|ZP_03719612.1| hypothetical protein NEIFLAOT_01458 96 42 Op 10 53/0.000 + CDS 87049 - 87483 669 ## PROTEIN SUPPORTED gi|241759618|ref|ZP_04757719.1| ribosomal protein L15 97 42 Op 11 3/0.105 + CDS 87497 - 88801 1063 ## PROTEIN SUPPORTED gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 98 42 Op 12 2/0.211 + CDS 88806 - 89024 237 ## PROTEIN SUPPORTED gi|15610598|ref|NP_217979.1| translation initiation factor IF-1 99 42 Op 13 . + CDS 89044 - 89157 195 ## PROTEIN SUPPORTED gi|34499619|ref|NP_903834.1| 50S ribosomal protein L36 100 42 Op 14 48/0.000 + CDS 89223 - 89585 607 ## PROTEIN SUPPORTED gi|241759635|ref|ZP_04757736.1| 30S ribosomal protein S13 101 42 Op 15 36/0.000 + CDS 89605 - 90000 666 ## PROTEIN SUPPORTED gi|15676093|ref|NP_273224.1| 30S ribosomal protein S11 102 42 Op 16 26/0.000 + CDS 90016 - 90636 1022 ## PROTEIN SUPPORTED gi|241759655|ref|ZP_04757756.1| ribosomal protein S4 103 42 Op 17 50/0.000 + CDS 90662 - 91648 595 ## COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit 104 42 Op 18 . + CDS 91673 - 92050 600 ## PROTEIN SUPPORTED gi|241759652|ref|ZP_04757753.1| ribosomal protein L17 + Term 92067 - 92102 7.1 105 43 Op 1 . + CDS 92567 - 93661 1430 ## COG0665 Glycine/D-amino acid oxidases (deaminating) 106 43 Op 2 . + CDS 93713 - 94171 266 ## COG2020 Putative protein-S-isoprenylcysteine methyltransferase + Prom 94181 - 94240 2.0 107 44 Op 1 . + CDS 94316 - 94963 418 ## MS2110 hypothetical protein 108 44 Op 2 5/0.105 + CDS 94980 - 95597 942 ## COG0352 Thiamine monophosphate synthase + Term 95706 - 95748 -0.8 + Prom 95604 - 95663 2.4 109 45 Op 1 16/0.000 + CDS 95808 - 96002 286 ## COG2104 Sulfur transfer protein involved in thiamine biosynthesis + Term 96100 - 96137 3.0 110 45 Op 2 . + CDS 96161 - 96949 1038 ## COG2022 Uncharacterized enzyme of thiazole biosynthesis + Term 96978 - 97013 6.7 + Prom 97063 - 97122 5.4 111 46 Tu 1 . + CDS 97155 - 99956 3811 ## COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains + Term 100004 - 100035 2.7 + Prom 100405 - 100464 5.1 112 47 Tu 1 . + CDS 100504 - 101379 310 ## PSHAa2349 hypothetical protein + Term 101537 - 101587 14.0 + Prom 101616 - 101675 8.0 113 48 Op 1 2/0.211 + CDS 101711 - 103084 1878 ## COG2056 Predicted permease 114 48 Op 2 . + CDS 103085 - 103312 356 ## COG2900 Uncharacterized protein conserved in bacteria + Term 103331 - 103380 7.2 - Term 103318 - 103368 3.2 115 49 Op 1 3/0.105 - CDS 103380 - 103706 446 ## COG0607 Rhodanese-related sulfurtransferase - Term 103730 - 103788 2.4 116 49 Op 2 2/0.211 - CDS 103806 - 104462 970 ## COG2518 Protein-L-isoaspartate carboxylmethyltransferase - Prom 104494 - 104553 6.8 - Term 104471 - 104511 -0.5 117 50 Tu 1 . - CDS 104566 - 105069 290 ## PROTEIN SUPPORTED gi|15902812|ref|NP_358362.1| hypothetical protein spr0768 - Prom 105096 - 105155 4.7 + Prom 105162 - 105221 3.1 118 51 Op 1 9/0.000 + CDS 105276 - 106049 1040 ## COG0149 Triosephosphate isomerase 119 51 Op 2 . + CDS 106057 - 106419 309 ## COG1314 Preprotein translocase subunit SecG + Term 106530 - 106560 2.0 + TRNA 106433 - 106518 61.9 # Leu GAG 0 0 + Prom 106435 - 106494 80.3 120 52 Tu 1 . + CDS 106739 - 107143 340 ## COG0582 Integrase 121 53 Op 1 . - CDS 107219 - 107842 547 ## COG0564 Pseudouridylate synthases, 23S RNA-specific 122 53 Op 2 . - CDS 107853 - 108425 718 ## COG2119 Predicted membrane protein - Prom 108625 - 108684 5.2 + Prom 108674 - 108733 2.7 123 54 Tu 1 . + CDS 108757 - 109344 216 ## COG1434 Uncharacterized conserved protein + Term 109379 - 109407 2.3 + Prom 109412 - 109471 9.1 124 55 Tu 1 . + CDS 109595 - 109945 392 ## NLA_8450 transposase Predicted protein(s) >gi|257257242|gb|ACDX02000008.1| GENE 1 3 - 185 265 60 aa, chain + ## HITS:1 COG:HI1721 KEGG:ns NR:ns ## COG: HI1721 COG2801 # Protein_GI_number: 16273607 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Haemophilus influenzae # 4 56 57 109 216 63 52.0 9e-11 NDPKAQRKWLTDVTELKGKDGKLYLSPILDLFNREIIAYAMSRNANSEMVKEMLEKPHPG >gi|257257242|gb|ACDX02000008.1| GENE 2 200 - 499 196 99 aa, chain + ## HITS:1 COG:RSc2265 KEGG:ns NR:ns ## COG: RSc2265 COG2801 # Protein_GI_number: 17546984 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Ralstonia solanacearum # 1 94 172 265 269 104 57.0 5e-23 MLHSDQGVLYRTAGYRELLAQHSMVQSMSRKANCWDNAPMESFFAVLKTECFYRAGELTV DELMKQIDDYMDYYNRERCSLKLKKLSPVAYRTQLAQSA >gi|257257242|gb|ACDX02000008.1| GENE 3 764 - 1546 935 260 aa, chain - ## HITS:1 COG:NMB0275 KEGG:ns NR:ns ## COG: NMB0275 COG0134 # Protein_GI_number: 15676199 # Func_class: E Amino acid transport and metabolism # Function: Indole-3-glycerol phosphate synthase # Organism: Neisseria meningitidis MC58 # 1 260 1 260 260 414 83.0 1e-116 MTDILNKILTTKAQEVAAQKASVSLDEMKKQADAALPVRGFFDSIRTKHEQNRPAVIAEI KKASPSKGLIRPDFHPVQIARAYENAGAACLSVLTDEQYFQGSPEYLKAARAAVGLPVLR KDFIIDEYQIYQARAWGADAVLLIAAALEQEQLEHFEAVAQQLGMSVLLELHDASELEKC RNLTTPLWGVNNRNLRTFDVSLQQTLDLLPALAGKTVVTESGIRSKSDVDFMRSHGVHTF LIGETFMRADDIEAEVRKLF >gi|257257242|gb|ACDX02000008.1| GENE 4 1672 - 2103 558 143 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261364778|ref|ZP_05977661.1| ## NR: gi|261364778|ref|ZP_05977661.1| late embryogeneis abundant protein [Neisseria mucosa ATCC 25996] late embryogeneis abundant protein [Neisseria mucosa ATCC 25996] # 1 143 1 143 143 69 100.0 9e-11 MKKLLIAAMMMAGLAACSQEAKQQTQEAASAVASDVNAAASEAKDAADKAVSDAKDAAAD AKDAADKAVSDVKDAAADAKASADKAVSDAKETADKALSDATEATGKAVEEAAKDAKNAA KDALNKAADATQDAADKMKDAAK >gi|257257242|gb|ACDX02000008.1| GENE 5 2506 - 3948 2356 480 aa, chain + ## HITS:1 COG:NMB1968 KEGG:ns NR:ns ## COG: NMB1968 COG1012 # Protein_GI_number: 15677798 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Neisseria meningitidis MC58 # 1 480 1 480 480 926 98.0 0 MKQLAMYINGRFENDFNGEWRDVLNPSTEETIAREPKGGKADVDRAVAAARAAQPAWERL PAVERGAYLRKIAQGIRERADELTDTIVAEGGKTKDLARVEVMFTADYLDYQAEWARRYE GEIIQSDRPRENILLFKRPLGVVAGILPWNFPFFLIARKMGPALVTGNTIVVKPSSVTPI NCHIFAEIVDAVGLPAGVFNVVNGPGAEIGNALSAHPQVDMVSLTGSVEAGRQVMEAASA NITKVSLELGGKAPAIVLKDADLDLAVKSILASRVGNTGQICNCAERVYVHSSLKDAFIE KMTAAMKGVRYGNPAEAEAGALEMGPLIEERAVKAVAEKVERAVKQGATLVCGGKRAEGR GYFFEPTLLTDTDNNMDIMKEETFGPVLPVSTFDTLDQVIALANDCEFGLTSSVYTTNLN EAFYVTRRLQFGETYINRENFEAMQGFHAGWKKSGIGGADGKHGLEEYLQTQVVYLETNI >gi|257257242|gb|ACDX02000008.1| GENE 6 4127 - 5638 2402 503 aa, chain + ## HITS:1 COG:NMB1425 KEGG:ns NR:ns ## COG: NMB1425 COG1190 # Protein_GI_number: 15677284 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Lysyl-tRNA synthetase (class II) # Organism: Neisseria meningitidis MC58 # 1 503 1 503 503 991 97.0 0 MSEQNNPQTEPQLDENQIIALRREKLHNIRQQRNAYPNDFKRDSFAADLHAQYGEISKEE LDPQAVPVKIAGRMMLKRQMGKASFATIQDVTGQIQLYLNNKGVSQEVLDDFNHWDLGDI VGAEGTLFKTNHGELTVRVSDIRLLSKSLRPLPDKHKGLSDQETKYRQRYVDLIANEESR NTFIKRSQIIQSVRNFMVNEHYLEVETPMMHPIPGGATAKPFVTHHNALDIPLYLRIAPE LYLKRLVVGGLERVFEINRSFRNEGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNA SRTVNGTAKISYNGKEVDLESPFERLTIIDAIKKYNPHYTDEQLNDAEWLKKEIVKHGES LPPSPGIGSLQLALFEGCAESKLWNPTFIVDYPVEVSPLARASDTKQGLTERFELFVVGR ELANGYSELNDPEDQAERFKSQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCGIGIDR LVMLLTDSQTIRDVILFPQMRPE >gi|257257242|gb|ACDX02000008.1| GENE 7 5861 - 6565 724 234 aa, chain + ## HITS:1 COG:NMB0170 KEGG:ns NR:ns ## COG: NMB0170 COG0850 # Protein_GI_number: 15676097 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation inhibitor # Organism: Neisseria meningitidis MC58 # 4 234 8 237 237 302 67.0 4e-82 MKPAFDIKSARLDVLAIHLHTADLTELEEFLRQRAGQYQELDVVPFVLDVQDFDHPESLD IGSMISLFARYGMQILGLRHESESWSSFAARYHLVFSRSDKSEPQQPKINQEPAPVQATV INNPTVLISTPVRTGQQVYAENGDLIVTGIVSEGAELIADGNIHIYAPMRGRALAGAKGN TNARIFIHSMQAELVSVAGIYRNFEQDLPDHLHKKAVQISLQDNRLVISAIDTD >gi|257257242|gb|ACDX02000008.1| GENE 8 6593 - 7408 1161 271 aa, chain + ## HITS:1 COG:NMA0100 KEGG:ns NR:ns ## COG: NMA0100 COG2894 # Protein_GI_number: 15793128 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation inhibitor-activating ATPase # Organism: Neisseria meningitidis Z2491 # 1 271 1 271 271 498 94.0 1e-141 MTKIIVVTSGKGGVGKTTTSASIAAGLALRGHKTAVIDFDVGLRNLDLIMGCERRVVYDL INVIQDEATLNQALIKDKNCENLFILPASQTRDKDALTREGVEKVMQELSSDKMGFEYII CDSPAGIEQGALMALYFADEAIVTTNPEVSSVRDSDRILGILQSKSRKAEQGGTVKEHLL ITRYSPERVSKGEMLSVQDICDILRIPLLGVIPESQNVLQASNAGEPVIHQNSVSAAEAY KDVIARLLGENREMRFLEAEKKGFFKRLFGG >gi|257257242|gb|ACDX02000008.1| GENE 9 7412 - 7687 432 91 aa, chain + ## HITS:1 COG:NMB0172 KEGG:ns NR:ns ## COG: NMB0172 COG0851 # Protein_GI_number: 15676099 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation topological specificity factor # Organism: Neisseria meningitidis MC58 # 1 85 1 85 87 129 91.0 1e-30 MSLIDMLFGRKPKTAAVARDRLQIIIAQERAQEGKAPDYLPTLRKELLEVLSKYVNVSLD DIRISQEKQDGMDVLELNITLPEQKTEQKKA >gi|257257242|gb|ACDX02000008.1| GENE 10 7691 - 8611 1311 306 aa, chain + ## HITS:1 COG:NMB0173 KEGG:ns NR:ns ## COG: NMB0173 COG0583 # Protein_GI_number: 15676100 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Neisseria meningitidis MC58 # 1 304 1 304 306 536 91.0 1e-152 MTLTELRYIVAVAQERHFGRAARRCFVSQPTLSIAIKKLEEELSVSLFDRSSNDIITTEA GERIVAQARRVLEEAELIKHLASEEQNELEGAFKLGLIFTVAPYLLPKLIISLRETAPKM PLMLEENYTHILTESLKRGDVDAIVVAEPFQEPGIVTEPLYDEPFFVIVPKGHHFEELDA VTPQMLGEEQVLLLTEGNCMRDQVLSSCSELAAKQKIQGLTNTLQGSSINTIRHMVASGL AISVMPATALTENDHLLFSIIPFSGSVPHRRVVLAYRRNFVRPKALTALRTAILNSHLHG VSFVKE >gi|257257242|gb|ACDX02000008.1| GENE 11 9225 - 10034 1390 269 aa, chain - ## HITS:1 COG:NMB0203 KEGG:ns NR:ns ## COG: NMB0203 COG0289 # Protein_GI_number: 15676130 # Func_class: E Amino acid transport and metabolism # Function: Dihydrodipicolinate reductase # Organism: Neisseria meningitidis MC58 # 1 268 1 268 269 473 93.0 1e-133 MSALKIAIAGVNGRMGRVLVEAVNNHPDTVLSGALEHSGSEVLGLDAGFASGIKTGIAIS DDVDAVLAQSDVLIDFTRPEPTLKHLQKCVEKGVNIIIGTTGFDDAGKAAIQAAGEKTGV VFAANFSVGVNLTFHILDTIARVLNEGYDIEIIEGHHRHKVDAPSGTALRMGEVIADALG RDLKQCAVYGREGHTGPRDPSTIGFATIRAGDIVGDHTALFATDGERVEITHKASSRMTF AAGAVRAAVWVNGKTGLYDMQDVLGLKNS >gi|257257242|gb|ACDX02000008.1| GENE 12 10050 - 10433 530 127 aa, chain - ## HITS:1 COG:NMA0065 KEGG:ns NR:ns ## COG: NMA0065 COG2913 # Protein_GI_number: 15793094 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Small protein A (tmRNA-binding) # Organism: Neisseria meningitidis Z2491 # 1 122 1 122 125 174 77.0 4e-44 MNKTLCLALAALVGLSACSAERVSLFPSYKLKVIQGNELDPRAVVSLQAGMSRDQVQLLL GTPLLRDAFHADRWDYTFNTSRNGIIKDRSNLTVYFENDVLVRAEGDAIQKSIETLQAEQ RAAQTTQ >gi|257257242|gb|ACDX02000008.1| GENE 13 10644 - 11078 612 144 aa, chain + ## HITS:1 COG:NMA0064 KEGG:ns NR:ns ## COG: NMA0064 COG0735 # Protein_GI_number: 15793093 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Neisseria meningitidis Z2491 # 1 144 1 144 144 266 96.0 7e-72 MEKFSNIAQLKDSGLKVTGPRLKILDLFESHAEEHLSAEDVYRILLEEGVEIGVATIYRV LTQFEQAGILQRHHFETGKAVYELDKGDHHDHIVCVKCGEVTEFHNPEIEALQDKIAEEN GYRIVDHALYMYGVCGECQAKSKR >gi|257257242|gb|ACDX02000008.1| GENE 14 11199 - 11924 676 241 aa, chain + ## HITS:1 COG:NMB0206 KEGG:ns NR:ns ## COG: NMB0206 COG2360 # Protein_GI_number: 15676133 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Leu/Phe-tRNA-protein transferase # Organism: Neisseria meningitidis MC58 # 1 237 1 237 241 362 71.0 1e-100 MSIPLLYPNDYTFPDPFYALEERDGLVGISRDLDTGRLLSAYRQGIFPWFSEDGWFFWYT IDPRAVIVPENLHIGRSLAKTLRNKPYRVTVNQCFETVIAHCAAFPRPGQDGTWIVPEFQ AAYTELHRLGHAHSFECFYPDETGRLKLAGGFYGVQIGRVFYGESMFALEPDASKIAFAR AVPFLAGLGIELIDCQQDTLHMHRFGSEPIPFVEFQTTLQRLNVLPLKEAFGARVVGGTL E >gi|257257242|gb|ACDX02000008.1| GENE 15 12251 - 12712 484 153 aa, chain - ## HITS:1 COG:NMA2140 KEGG:ns NR:ns ## COG: NMA2140 COG1490 # Protein_GI_number: 15795011 # Func_class: J Translation, ribosomal structure and biogenesis # Function: D-Tyr-tRNAtyr deacylase # Organism: Neisseria meningitidis Z2491 # 1 149 1 149 163 232 73.0 2e-61 MRAVIQKVSCSRVDVLDGNHKETCAEIDNGLMILLGVTHDDTEADARYIADKAANLRIFE DDAGRLNLSVKDIGGSILLVSQFTLYADARNGRRPSFSAAAPAEQAQTLYLHTAELLRGH GLNVQTGRFQTHMQVSLCNDGPVTLLLDSQKLF >gi|257257242|gb|ACDX02000008.1| GENE 16 12908 - 13780 1025 290 aa, chain - ## HITS:1 COG:NMA2142 KEGG:ns NR:ns ## COG: NMA2142 COG0760 # Protein_GI_number: 15795013 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Neisseria meningitidis Z2491 # 3 290 2 288 288 288 57.0 7e-78 MRKNHFTAALVMAALSGSLFAQTLVTVNGQAIDSSVIDGQVAALRAENKQIQDSPQLRQE LTNRQVISTVIAQEAKRRKLDQSAEFKKALEQARADAKKQGADKKPSFKTEWAAFEDDLL GQALAIDVLRKNPVNEQEIKKSYDEFAKFYQGSQEVRLREIVTRTKADGQKAAADLKAKK AFTAVLKQYSIDEEAKKAGGIPQAYVPLKDLQEAAPPLYAAVKDLKKGEATSEPLQDGNS YAVFYVDDRRDVKVPAFNEIKGSMARDLSTARIDDTMRALLQKADIKPAK >gi|257257242|gb|ACDX02000008.1| GENE 17 13815 - 14084 285 89 aa, chain - ## HITS:1 COG:NMB0344 KEGG:ns NR:ns ## COG: NMB0344 COG0271 # Protein_GI_number: 15676259 # Func_class: T Signal transduction mechanisms # Function: Stress-induced morphogen (activity unknown) # Organism: Neisseria meningitidis MC58 # 7 89 7 89 92 115 66.0 3e-26 MDMRSAIEGRLKTLNPQIFEFQDDSHLHKGHAGNKGGGHYAVTVVSEAFTGMKRIERQRM VQNLLQDLFAGGFIHALSIKAATPDEYFH >gi|257257242|gb|ACDX02000008.1| GENE 18 14084 - 14374 468 96 aa, chain - ## HITS:1 COG:NMA2144 KEGG:ns NR:ns ## COG: NMA2144 COG2350 # Protein_GI_number: 15795015 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 96 1 96 96 143 77.0 8e-35 MEYYMLLATDADDVHEARMAARPDHLKRLEALQAEGRLLTAGPNPLPDNPERVSGSLIVA KFASLDEAQEWAEQDPYVAAGVYEEVLIKPYKAVFK >gi|257257242|gb|ACDX02000008.1| GENE 19 14378 - 14908 552 176 aa, chain - ## HITS:1 COG:NMA2145 KEGG:ns NR:ns ## COG: NMA2145 COG2917 # Protein_GI_number: 15795016 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Intracellular septation protein A # Organism: Neisseria meningitidis Z2491 # 1 176 1 176 176 236 78.0 1e-62 MKILSDLLAVILFFLTYTVTKDMIAATAVALIVGVLQAAFTYWKFKKLDTMQWVGLVLIV VFGGATILLKDPRFIMWKPSVLFWIGALVLLFSHLAGKNGLKATMGKELELPDTVWNNLT YAWVAFLIFMGIANWFVFTHFESHWVNYKMFGSTGLMFAFFIAQGIYLGKHLPKEN >gi|257257242|gb|ACDX02000008.1| GENE 20 15253 - 17715 1674 820 aa, chain + ## HITS:1 COG:NMA2146 KEGG:ns NR:ns ## COG: NMA2146 COG3170 # Protein_GI_number: 15795017 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein FimV # Organism: Neisseria meningitidis Z2491 # 1 603 35 571 880 183 34.0 1e-45 MKKHYKIKLIAASVALAVSVGASAGLGGLNVQSHLGEPFSGNITVTGEEAQALFNGGKAS VSNANLRTSVHRAGDRAVINIRSAKAIKDPVLIFQVSTGSQSREYTAIIDPADYSVKGDS TPRVRQEPPPAYASQQIDRQAARERINRALRSGNASADVANNTRKEGIDNKKSKNTQTQP KQTQNATSSVQGEPRYGKRHLVKQGETLTEIATRIRPQGMTVEQAIQALVKANPSVFINK NADHMLAGKVLNIPTQFDMKQAAAKQAAEKPLVSDKQQPQTAAASKASSEKSEAAKTNAS AENKAGENKAGEEAKSNKEAKLEQQPAQVTASAPQGATQEQAASSVGTEEVLQPGIAEQT AASETAKSTPEAQVEEALAAQQNSAAQSEAVEESSEDGGLWRWLLIGGGALLALLLLLKA LGKRKAAAVAPVVPVPSAGYDEEDDDISFAETVIADEAKPEQFVQAKAVPAEESDGLSIE DDFDDEAFFVQPNAAKEAAEDEININIDDIDDKHVGIVSSAVTVDEETEKRRDLDWDSVE STESVYEPEPENPYQPVSIVIESRHQDEAVEEPDNTAHIRQFDEVQSNFDTSSHDANEET KEADAPVGEEEYSYTEPAVVEEVSDLEFDYEASEAQQQERTVGAEDVKGVEEAEEGWDFF SEKIETQPIEPLPEFTTSKQTSSEKLNGDEALEFASVDTSADEAVAEEPFEIKQDEGITF QESDEDFGLADSQGNGVEETIEWENLTVDEEVSKSAFDSGFISESVGMTAPLEAKYELAK MYVEIGDPGAARETLQELMEEATGDILDKTKALLAELGAD >gi|257257242|gb|ACDX02000008.1| GENE 21 17842 - 18654 533 270 aa, chain + ## HITS:1 COG:NMB2036 KEGG:ns NR:ns ## COG: NMB2036 COG0101 # Protein_GI_number: 15677859 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthase # Organism: Neisseria meningitidis MC58 # 13 270 8 265 265 419 77.0 1e-117 MMFPSSKQPAVCRWALILSYDGSRFYGWQKQAGGLPTVQTTLEYALSQIASENIRTIVAG RTDTGVHATAQVIHFDTTVVRPEQAWVRGVNAHLPEGVSVLFAQQVASHFHARFDAYGRR YRYLLESSPVRSPILQGRVGWTHLKLDPDKMQQAALLLEGEHDFSSFRAAECQAKSPIKT LYSAKISGTPQFLKLDLHGNAFLHHMVRNIMGALVYVGSGRLSVSGFQTLIGERSRLKAP PTFMPDGLYLTGVDYPPEFGIIRPEMPEWL >gi|257257242|gb|ACDX02000008.1| GENE 22 19353 - 20438 1025 361 aa, chain + ## HITS:1 COG:NMB2039 KEGG:ns NR:ns ## COG: NMB2039 COG3203 # Protein_GI_number: 15677862 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Neisseria meningitidis MC58 # 1 361 1 331 331 327 54.0 3e-89 MKKSLIALTLAALPVAAMADVTLYGQVKAGVDISRVKEKTTVNGVTTKDTTKTATEIADY GSRIGFKGHEHLSNNLNAIWQVEQNTSVAGTDKGWGTRESFIGLEGGFGKIRAGKLNTPL KDSSDSIDPWEASEANSDVLALGKLERVEDRKVSARYDSPVFSGFSASVQYQPRDNANPD DKFTHDVKSRDSYGLGLNYENAGFFGRYAGSFAKHSVLDKDYLNSFNRNTTLAADTYKDH QVHRLVAGYDANNVLVSVAGQYEGFKADKANAKKNERTEVAVTGGYRMGNVMPRVSYAHG FKAKENGEKQANSQYNQVIVGADYDFSKRTSALISAGWLREGKGDNKYEKTAGTVGLRHK F >gi|257257242|gb|ACDX02000008.1| GENE 23 20998 - 21441 487 147 aa, chain - ## HITS:1 COG:BS_ywlF KEGG:ns NR:ns ## COG: BS_ywlF COG0698 # Protein_GI_number: 16080745 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase RpiB # Organism: Bacillus subtilis # 1 144 1 145 149 99 38.0 3e-21 MRLIIAAPANGTTLKDALKAHLQNDPRIDSLTDLSSPNGTYPQLSFAAAQEVAAGRADRA ILICGTGIGTAIAANKVRGIRAATAHDLITLRGSVENYDAQVLCMGQNVIATPAAWALVD IWLDLRHDTGSGYAPKIGEIEAYECGK >gi|257257242|gb|ACDX02000008.1| GENE 24 21835 - 24225 3835 796 aa, chain - ## HITS:1 COG:NMB0212 KEGG:ns NR:ns ## COG: NMB0212 COG0187 # Protein_GI_number: 15676138 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Neisseria meningitidis MC58 # 1 796 1 796 796 1502 97.0 0 MTDQKHEEYGADSIQVLEGLEAVRKRPGMYIGDTQDGSGLHHMVFEVLDNAIDEALAGHC DKITVTIHADNSVSVADNGRGMPTGIHPKEGRSAAEVIMTVLHAGGKFDNNSYKISGGLH GVGVSVVNALSDWVTLTIYRDGKEHFVRFVRGETEEPLKVVGDSDKKGTTVRFLASAETF GNVEYSFDILAKRIRELSFLNNGVDIELIDERDGKHESFALSGGVAGFVQYMNRKKTPLH EKIFYAFGEKDGMSVECAMQWNDSYQESVQCFTNNIPQRDGGTHLTALRQVMTRTINSYI EANEVAKKAKVETAGDDMREGLTCVLSVKLPDPKFSSQTKDKLVSSEIGPVVNEVINQAL TDFLEENPNEAKIITSKIVDAARAREAARKAREITRRKGVMDGLGLPGKLADCQEKDPAL SELYLVEGDSAGGSAKQGRDRKFQAILPLKGKILNVEKARFEKMLASQEVATLITALGAG IGKEEFNPEKLRYHRIIIMTDADVDGAHIRTLLLTFFYRQMPELVERGYIYIAQPPLYKA KYGKQERYLKDELEKDQWLLGLALEKAKIVSDGRTIEGAELADTAKQFLLAKTVIEQESR FVDELVLRAMLHASPIDLTSSENADKAVAELSGLLDEKEVALERIEGHEGNRFIKITRKL HGNVMVSYIEPKFLNSKAYQTLTQTAAALKGLVGEGAKLYKGENEYDVDSFETALNILLQ NAQKGMSIQRYKGLGEMNPEQLWETTMDPTVRRLLKVRIEDAIAADEVFVTLMGDEVEPR RAFIENNALIAQNIDA >gi|257257242|gb|ACDX02000008.1| GENE 25 24445 - 25845 2326 466 aa, chain - ## HITS:1 COG:NMB0211 KEGG:ns NR:ns ## COG: NMB0211 COG1760 # Protein_GI_number: 15676137 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Neisseria meningitidis MC58 # 1 466 1 461 461 811 88.0 0 MISIFDIFKIGIGPSSSHTVGPMKAAAAFSDDLKQSGLDAQTERIVIDIYGSLALTGRGH GTFDALLLGLEGSLPHDIPLADIPDRLERIRTQHILRLNGREISFNPDSDLNIRGDQVLP KHPNGLNFTAYGKDGGKLKEQIYYSVGGGFIVTDQEFDKQAEQTRPVPYPYTSCAELLAQ CRMNQLDISEAVLANEAALAGCSEAEIRRRVAGVADVMEGCIKRGLAADGELPGGLNVRR RAPQLAAKLKALRETEIVNTQLWPMVYAMAVNEENAAGGRVVTAPTNGAAGIIPAVLHYF RKFNPHATQERVENFLLTAGAIGILYKTNASISGADVGCQGEVGVACSMAAGAYAEVIGG TPKQVENAAEMAMEHHLGLTCDPVGGLVQIPCIERNGIAAEKALKLGTLALLEDGTDKKV SLDEVIQTMLQTGRDMKSTYKETSLAGLAITLQKKAVPVSVRVVEC >gi|257257242|gb|ACDX02000008.1| GENE 26 25871 - 26770 927 299 aa, chain - ## HITS:1 COG:NMA0588 KEGG:ns NR:ns ## COG: NMA0588 COG4973 # Protein_GI_number: 15793579 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinase XerC # Organism: Neisseria meningitidis Z2491 # 1 298 1 303 305 386 67.0 1e-107 MLARDFGLSLDGYLKMLGQQGKSAHTLSAYGRDLTELVRLLTEGSSETAQDLTRRDFVAA LKRLSQQGLSERTLARKLSAWRQYCGWLVQSSMMDNDPTVNLKAPRLPERLPKALPQEEL NHMLDNTPADDGLAVRDHALFELMYGSGLRLSEIHGLDLGDVLLDEGWVSVTGKGRKERQ VPLSGKSVEALRAYLSERVAADGETALFTGKNGTRLGQRQIQKRLQAWAVQQGSGQHISP HMMRHSYASHLLQSSRDIRAVQELLGHSNLSTTQIYTKLDFDHLAKVYDEGHPRAKRKK >gi|257257242|gb|ACDX02000008.1| GENE 27 26773 - 27201 318 142 aa, chain - ## HITS:1 COG:no KEGG:Dbac_1354 NR:ns ## KEGG: Dbac_1354 # Name: not_defined # Def: esterase # Organism: D.baculatum # Pathway: not_defined # 13 142 13 142 143 136 54.0 3e-31 MGKLAVADVDAVLFQTTLRVQVGDVNYGGHLANDAVLRLCHEVRMRWLAGLGWSETDAGG AGLIMADAAVQYLAQGFYGDELSAEMGVEDIGKGGFALLFRLTRITDGKVLARARTGMVC FDYARQKVCRLPEALKTVLEVV >gi|257257242|gb|ACDX02000008.1| GENE 28 27413 - 28477 1913 354 aa, chain + ## HITS:1 COG:NMA0587 KEGG:ns NR:ns ## COG: NMA0587 COG0191 # Protein_GI_number: 15793578 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Neisseria meningitidis Z2491 # 1 354 1 354 354 698 97.0 0 MALVSMRQLLDHAAENSYGLPAFNVNNLEQMRAIMEAADQVNAPVIVQASAGARKYAGAP FLRHLILAAVEEFPHIPVVMHQDHGASPDVCQRSIQLGFSSVMMDGSLMEDGKTPSTYEY NVDATRTVVNFSHACGVSVEGEIGVLGNLETGEAGEEDGVGAAGKLSHDQMLTSVEDAVR FVKDTGVDALAIAVGTSHGAYKFTRPPTGDVLRIDRIKEIHQALPNTHIVMHGSSSVPQE WLKVINEYGGKIGETYGVPVEEIVEGIKHGVRKVNIDTDLRLASTGAIRRFMAENPSEFD PRKYLSKTVEAMKQICLDRYLAFGCEGQAGKIKPVSLEKMANRYAKGELNQIIK >gi|257257242|gb|ACDX02000008.1| GENE 29 29171 - 29899 1159 242 aa, chain - ## HITS:1 COG:XF1626 KEGG:ns NR:ns ## COG: XF1626 COG3279 # Protein_GI_number: 15838227 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Xylella fastidiosa 9a5c # 1 229 1 233 252 105 34.0 1e-22 MLSVIIVEDEVLAAERLRILLEECNVVILNVFHHAQPALDWLSMHEVDIVFADIGLPEIT GLELVERIKRVAKRQPEIIFTTAYEEHALRAFELAAADYLLKPIRSTRLQAALDRVSEKY REKADDFTHFQVFSRDRMIEIPWQQARYLMAEHKTVYLVTGDRQSYELPKTLVYWEELLG EKIIRLHRNALAFRHTLDYLIRLDDDDDSDSAWGAQILDIPKPLPVSRRQLSAIRKILKS KV >gi|257257242|gb|ACDX02000008.1| GENE 30 30086 - 30991 940 301 aa, chain - ## HITS:1 COG:NMA2138 KEGG:ns NR:ns ## COG: NMA2138 COG0008 # Protein_GI_number: 15795009 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Neisseria meningitidis Z2491 # 9 300 2 294 295 452 76.0 1e-127 MTAPLPTDYIGRFAPSPTGLLHIGSLLTALASYADARANRGKWLVRMEDLDPPREMPGAA AHILHTLEAFGFEWDGEVVWQSLRHSLYRDALGRLKEKGLLYPCYCSRKDWQAAAAQGAD GFVYNGRCRRPEDRPHTDKPPAWRIRVNDETIGFDDGIVGHYAQNLARDIGDFVLLRADG FWAYQLAVVADDADQGITHIVRGQDLLVSTPRQIYLQRSLGFATPHYAHLPLLVNKHGQK WSKQTLAPALDENHKEQLLRQVLQYLNLPPAPEVSRPQALLSWAIEHWQPHKIPIHDIVT E >gi|257257242|gb|ACDX02000008.1| GENE 31 31183 - 31860 716 225 aa, chain + ## HITS:1 COG:NMB1871 KEGG:ns NR:ns ## COG: NMB1871 COG1214 # Protein_GI_number: 15677706 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Inactive homolog of metal-dependent proteases, putative molecular chaperone # Organism: Neisseria meningitidis MC58 # 1 225 1 225 225 305 72.0 3e-83 MLIDTSRPILAVDTGTSFLSLALRADGEVRLYHENVGTRQSELILPQIRVLFEQAGIGAS DLGGIVYAQGPGAFTGLRIGAGVVQGLATPFDTPVVGVPSLDAAAYLVPDCPCVLAATDA RMGEVFYAWFDTQSHMRLGDYHVGKASEIVLPKGQTFGAGVGNAFALADKPPFDGIPSMP TAADFLELALSGRYPAADAAHAELLYVRDKIALTAKEQAERKAKP >gi|257257242|gb|ACDX02000008.1| GENE 32 31857 - 32300 229 147 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|117923948|ref|YP_864565.1| SSU ribosomal protein S18P alanine acetyltransferase [Magnetococcus sp. MC-1] # 1 143 2 143 154 92 37 6e-18 MNIRPASSDDCAALTAIDAAGNPSPWSERQFLEAVENPADTVYVCERGGEICGFAVWREI CGESELHLIAAAPACRRQGIASKLLAYWFQTTSSQGVSRLLLEVRAGNAAAIGLYRKYGF IETGRRKNYYPLPEGGYEDAILMEKPC >gi|257257242|gb|ACDX02000008.1| GENE 33 32294 - 33133 636 279 aa, chain + ## HITS:1 COG:NMB1873 KEGG:ns NR:ns ## COG: NMB1873 COG1573 # Protein_GI_number: 15677708 # Func_class: L Replication, recombination and repair # Function: Uracil-DNA glycosylase # Organism: Neisseria meningitidis MC58 # 1 279 1 239 245 167 43.0 2e-41 MLSSRYLHLHEALGLGPMWLKRGAKTIPAALTTPKTGMPKPAAASVQTTIPRQERPLSAG AHQARLSAMAAVHGGSQQDVPEREMPSQQTAAVEAARQSEAKPKQETPADKQTRSIQNTA DLPAAPHHSDDLPRLSATVKTAHLMVVSICPSTEDTLHGELFHGETGVLLDNMLAAIRLS PQQAHKTSWVKAAPVFSPHPSEAQIHAELPALKHELESSQARAVLFLGQVFEQKEMMAVM DELCGGIPYFTIPHPARLLRQPRLKAYAWQVLKKAAAVL >gi|257257242|gb|ACDX02000008.1| GENE 34 33502 - 34722 2036 406 aa, chain - ## HITS:1 COG:NMA0435 KEGG:ns NR:ns ## COG: NMA0435 COG1364 # Protein_GI_number: 15793440 # Func_class: E Amino acid transport and metabolism # Function: N-acetylglutamate synthase (N-acetylornithine aminotransferase) # Organism: Neisseria meningitidis Z2491 # 1 406 1 406 406 657 87.0 0 MAVNLTEKTADQLLNIDGIQLFTARAGIKQADRADLTLMVLSGGNTVGAVFTTNRFCAAP VHIAKSHLFDEDGVRAIIINTGNANAGTGAQGRIDAIETCAATAEQTGCKPSQVLPFSTG VILEPLPVGKIVAALPKMQPADWADAARAIMTTDTVPKSASREGSVGEKHTVRATGIAKG SGMIHPNMATLLSFIATDAKVSQPILQLMTQEIADETFNTITVDGDTSTNDSFVIIATGK NSQSEIDNIADPRYKQLKDLLCSLALELAQAVVRDGEGATKFITVRVENAKTRDEARQAA YAVAHSPLVKTAFFASDPNLGRLLAAIGYAGIADLDTDTVEMYLDDVLVAENGGRAASYT EEQGQAVMAKDEITVRIKLHRGQAAATVYTCDLSHDYVSINADYRS >gi|257257242|gb|ACDX02000008.1| GENE 35 34805 - 35506 1180 233 aa, chain - ## HITS:1 COG:NMB2004 KEGG:ns NR:ns ## COG: NMB2004 COG1346 # Protein_GI_number: 15677832 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative effector of murein hydrolase # Organism: Neisseria meningitidis MC58 # 9 233 6 230 230 336 88.0 2e-92 MDGILSLWQQPSVLLFLTLAVYALALILRARTGYLLLNPVLISTVTLIAYLKILDIDYAV YHDAAQFIDFWLKPAVVALAVPLYQNRQKIFSQWLPVIVSQLAGSVTGIITGMYFAKWLG AEREVVLSLAAKSVTNPIAIEITRTIGGIPAITAATVIVAGLVGQIAGYTVLKNTVVMPS SIGMSLGTASHAMGIAASLERSRRMAAYAGLGLTLNGVLTAAIAPIIIPVLGF >gi|257257242|gb|ACDX02000008.1| GENE 36 35506 - 35850 573 114 aa, chain - ## HITS:1 COG:NMB2003 KEGG:ns NR:ns ## COG: NMB2003 COG1380 # Protein_GI_number: 15677831 # Func_class: R General function prediction only # Function: Putative effector of murein hydrolase LrgA # Organism: Neisseria meningitidis MC58 # 1 111 1 111 115 158 82.0 2e-39 MHTIRALLVLLGCLALGETAAYLTGIKLPGSIIGMGILFAMLQAGWVKAEWLQQLTDALM ANLTLFLVPPCVAVISYLDLIADSWLSILVSAAASTVCVLLVTGKVHQWIREKI >gi|257257242|gb|ACDX02000008.1| GENE 37 36063 - 36551 787 162 aa, chain + ## HITS:1 COG:RSc2090 KEGG:ns NR:ns ## COG: RSc2090 COG2346 # Protein_GI_number: 17546809 # Func_class: R General function prediction only # Function: Truncated hemoglobins # Organism: Ralstonia solanacearum # 2 120 13 131 134 113 44.0 1e-25 MYHAFSGATGVRNLTDRFYDLMELEPQYRALRQMHGEDMTLIREKLYEFFSGWLGGPPLF EQKYGHPMLRARHMPFAVNMQVRDEWVACFAQAMNELEISKDLAEPVLIRIFAMADWMRN QNEEGIEPPMPPMAVDPTIRIPELKNVLKQYGVDGYFPTFPA >gi|257257242|gb|ACDX02000008.1| GENE 38 36990 - 37781 902 263 aa, chain + ## HITS:1 COG:STM1760 KEGG:ns NR:ns ## COG: STM1760 COG0790 # Protein_GI_number: 16765101 # Func_class: R General function prediction only # Function: FOG: TPR repeat, SEL1 subfamily # Organism: Salmonella typhimurium LT2 # 41 255 170 418 509 162 44.0 4e-40 MKQPTKWLDAALIALGLKQAAWADDVPDFRENLQAAERGDAHAQALLGNMYANGQGVRQD DAEAVRWYRQAAAQGFAEAQYNLGVAYERGRGVRQDDAQAVQWYRKAAEQGYATAQFNLG WMYYKGEGVRQDYAQAVQWYRKAAEQGVAEAQSNLGVMYERGRGVRQDDEQAVQWYRKAA EQGHAQAQDNLGEAYEEGLGVHQDDAQAVQWYRKAAEQGLANAQYNLGVMYERGRGVRQD DEQAVQWYREAAEQGHLWALFKI >gi|257257242|gb|ACDX02000008.1| GENE 39 37711 - 37917 134 68 aa, chain + ## HITS:1 COG:NMB0419 KEGG:ns NR:ns ## COG: NMB0419 COG0790 # Protein_GI_number: 15676331 # Func_class: R General function prediction only # Function: FOG: TPR repeat, SEL1 subfamily # Organism: Neisseria meningitidis MC58 # 24 68 154 198 198 68 80.0 3e-12 MNRQCSGIARLQNKGIYGPYLKFNLGWMYANGHGVRQDLTLAQEWLGKACQNGDQNGCDN YQRLKAGY >gi|257257242|gb|ACDX02000008.1| GENE 40 38003 - 39340 1918 445 aa, chain + ## HITS:1 COG:NMA2064 KEGG:ns NR:ns ## COG: NMA2064 COG0771 # Protein_GI_number: 15794942 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramoylalanine-D-glutamate ligase # Organism: Neisseria meningitidis Z2491 # 1 445 1 445 445 857 96.0 0 MTFQNKKILVAGLGGTGISMIAYLRKNGVEVAAYDAELKPERVSQIGKMFDGLVFYTGRL KDALDNGFDILALSPGISERQPDIEAFKQNGGRVLGDIELLADIVNRRGDKVIAITGSNG KTTVTSLVGYLCIKCGLDTVIAGNIGTPVLEAELQRESKKADVWVLELSSFQLENTESLR PTAATVLNISEDHLDRYDDLLDYAHTKAKIFRGDGVQVLNSDDVFCRAMKRAGREVKWFS LEHEADFWLERETGRLKQGNEDLIATQDIPLQGLHNAANVMAAVALCEAVGLPREALLEH VKTFQGLPHRVEKIGEKNGVVFIDDSKGTNVGATAAAIAGLQNLLFVILGGMGKGQDFTP LRTALAGKAKGVFLIGVDAPQIRRDLDGCGLNMTDCATLEEAVQTAYAQAEAGDIVLLSP ACASFDMFKGYAHRSEVFIEAFKAL >gi|257257242|gb|ACDX02000008.1| GENE 41 39577 - 39879 372 100 aa, chain + ## HITS:1 COG:DR0235 KEGG:ns NR:ns ## COG: DR0235 COG0154 # Protein_GI_number: 15805271 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases # Organism: Deinococcus radiodurans # 1 93 447 540 561 65 41.0 3e-11 MPPPAAQKAMRLLFGTLRLGFLLKNNPFLEKEAAATLQYVGYTSPLNMSGNPAMSVPLYR HHGLPVGTQFAAAHGREDTLLSLAAQLEQIQPWVEIPQVV >gi|257257242|gb|ACDX02000008.1| GENE 42 40158 - 41315 1176 385 aa, chain + ## HITS:1 COG:NMB0421 KEGG:ns NR:ns ## COG: NMB0421 COG0772 # Protein_GI_number: 15676333 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Neisseria meningitidis MC58 # 7 385 9 423 423 452 61.0 1e-127 MISLSKILDRPISRSGQKFDTSLLWMTVLMTVFSLVMIYSASIAYAAAEGGTQFSFVGKQ ALFVAVGVSVCIGLSFISMNTWKKLMPWYFGFSGLLLLLVLFLGREINGATRWIHAGPVN IQPTELFKLAVVLYLSSLFTRKAEVLQSVKKIMFPGGLIAAGLVLIMFQPDFGSFVVIVG VTMAMVFLAGFPAKYFIMMGMILASFMTAAIMLAPYRMARVSAFLNPWADPLGKGYQLTH SLMAIARGEWFGQGLGASLEKRFYLPEAHTDFIFAVIGEEFGFLGMCILVACYVWLVVRA FSIGRQARDLDLTFGAYVANGIGVWIGIQSFFNIGVNIGILPTKGLPLPLMSYGGSAVVV MLVCITLLLRVDYENRKKMRGYQVE >gi|257257242|gb|ACDX02000008.1| GENE 43 41319 - 42386 1341 355 aa, chain + ## HITS:1 COG:NMA2062 KEGG:ns NR:ns ## COG: NMA2062 COG0707 # Protein_GI_number: 15794940 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase # Organism: Neisseria meningitidis Z2491 # 1 346 1 346 355 664 96.0 0 MGGKTFMLMAGGTGGHIFPALAVADSLRARGHHVIWLGSEGSMEERIVPQYDILLETLAI KGVRGNGIKRKLMLPFTLYKTVREAQRIIRKHRVECVIGFGGFVTFPGGLAAKLCGVPIV IHEQNAVAGLSNRQLSRWAKRVLYAFPKAFSHEGGLVGNPVRADIANLPEPAERFQGREG RLKILVVGGSLGADVLNKTVPQALALLPDDARPQMYHQSGRGKLGSLQADYDALGVKAEC VEFITDMVSAYRDADLVICRAGALTIAELTAAGLGALLVPYPYAVDDHQTANARFMVQAE AGLLLPQSQLTAEKLAEILGGLNREKCLKWAENARTLALPHSADDVAEAAIACTA >gi|257257242|gb|ACDX02000008.1| GENE 44 42521 - 43348 790 275 aa, chain + ## HITS:1 COG:PM1322 KEGG:ns NR:ns ## COG: PM1322 COG3315 # Protein_GI_number: 15603187 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: O-Methyltransferase involved in polyketide biosynthesis # Organism: Pasteurella multocida # 1 270 1 272 276 317 55.0 1e-86 MSAKISPETVSALSSTMLIPLWAKAVEQGRAQPLLRDDEAVRMLDKIDYDFSKFAKVKAS QVGCCGRAKLLDDMTRHFIAEHPDAVVVQIGAGLDARYERLGKPRITAWYDLDLPEVIEV RRMLLPESDNHYLGASMFDEAWMNTVAAHGKPVLLVIEGVLMYFEETQVQDFFKQVARRL PHAQLAFDTIPKAYIGQSKHHDALGKMDKPPEFRWAISGTDDIRRLMPGVEIIEEAGLSS VCKPRYPWLLRLLYATAWGRRKLDMRLMRIQVPSS >gi|257257242|gb|ACDX02000008.1| GENE 45 43614 - 45023 1971 469 aa, chain + ## HITS:1 COG:NMA2061 KEGG:ns NR:ns ## COG: NMA2061 COG0773 # Protein_GI_number: 15794939 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate-alanine ligase # Organism: Neisseria meningitidis Z2491 # 1 468 38 505 506 900 97.0 0 MMKNRVTNIHFVGIGGVGMSGIAEVLHNLGFKVSGSDQARNTVTEHLSSLGIQVYPGHTA EHVNGADVVVTSTAVKKDNPEVVAALEQQIPVIPRALMLAELMRFRDGIAIAGTHGKTTT TSLTASILGAAGLDPTFVIGGKLNAAGTNARLGKGEYIVAEADESDASFLHLTPIMSVVT NIDEDHMDTYGHSVEKLHQAFVDFIHRMPFYGKAFLCIDSEHVRAILPKVSKPYATYGLD DTADIYATDIENVGAQMKFTVHVQMKGSEQAPFEVVLNMPGRHNVLNALAAIGVALEVGA SVEAIQRGLLGFEGVGRRFQKYGEIKLPNGGTALLVDDYGHHPVEMAATLSAARGAYPEK RLVLAFQPHRYTRTRDLFEDFTKVLNTVDALVLTEVYAAGEEPIAAADSRALARAIRVLG KLEPIYCENVADLPEMLLNVLQDGDVVLNMGAGSINRVPAAMLELSKKA >gi|257257242|gb|ACDX02000008.1| GENE 46 45174 - 46088 963 304 aa, chain + ## HITS:1 COG:NMB0424 KEGG:ns NR:ns ## COG: NMB0424 COG1181 # Protein_GI_number: 15676336 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanine-D-alanine ligase and related ATP-grasp enzymes # Organism: Neisseria meningitidis MC58 # 1 304 1 304 304 553 94.0 1e-157 MQNFGKVAVLMGGFSSEREISLDSGAAILNALKSKGIDAHAFDPKETPLAELKTQGFQTA FNILHGTYGEDGAVQGALELLGIPYTGSGVAASAIGMDKYRCKLIWQALGLPVPEFAVLH EDSDFDAVEQQLGLPMFVKPAAEGSSVGVVKVKEKGRLKSVYEELKHLQGEIIAERFIGG GEYSCPVLNGKGLPSIHIIPATEFYDYEAKYNRDDTVYQCPSEDLSEAEENLMRALAVRG AQAIGADGCVRVDFLKDTDGKLYLLEINTLPGMTSHSLVPKSAAHTGVDFADLCIEILKT AHVG >gi|257257242|gb|ACDX02000008.1| GENE 47 46078 - 46803 564 241 aa, chain + ## HITS:1 COG:NMA2059 KEGG:ns NR:ns ## COG: NMA2059 COG1589 # Protein_GI_number: 15794937 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division septal protein # Organism: Neisseria meningitidis Z2491 # 1 241 1 242 242 306 60.0 3e-83 MWDDASALGRLTRWLLLLMALMLIGTCIAWLYNSNHFPVKQVSIQGKLTYSDGKALQRAA QQHTRGNIFRADLDGIQAAFQKLPWVDSAMVRRRFPDTVEIHLTERVPVAHWRSGGLVDT KGNVFDAKLKTKLPVFEGQPGTGKDMVKHYEEFSGILRRQNLAIKELIYTPRSAWLVVLD NGITVRLGRENEIKRLQLFAEIWPTLLRKNQNRLSYVDMRYKDGFSVRYTSETSSENVSD D >gi|257257242|gb|ACDX02000008.1| GENE 48 46884 - 48128 1808 414 aa, chain + ## HITS:1 COG:NMA2058 KEGG:ns NR:ns ## COG: NMA2058 COG0849 # Protein_GI_number: 15794936 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Actin-like ATPase involved in cell division # Organism: Neisseria meningitidis Z2491 # 1 414 1 414 414 576 73.0 1e-164 MEQQGKYISALDIGTSKVIALIGEVQEDNEIHIVGLGQAPSRGLKAGMVTNIDATAQAIQ QAVNEAELMADTKISHVTTGIAGNHIRSLNSQGVVKIKDGEVSQADIDRAIETAKAINIP PDHNILHTVVQEYIIDNQPGVKEPIGMSGVRLDTRVHIITGANTALQNIQKCIHRCGLQM DQIMLQPLASGQAVLTEDEKDLGVCVIDIGGGTTDIAVYTNGAIRHTAVIPVAGDLITKD LAQALRTPHSAAEYIKIHYGVAIPDMEGLDEMVEVPSVGDRQPRQISRRVLASVIGPRVE EILELTLNELRRSGFPEEVLTSGIVLTGGASMLTGIVELAEEVFGLPARIGVPQEMGGVS ERIRNPRYSTAIGLLQAARGEEDGAPVTGAIVVHDQTEKISLWAKLMKFVKDNF >gi|257257242|gb|ACDX02000008.1| GENE 49 48353 - 49546 1289 397 aa, chain + ## HITS:1 COG:NMA2057 KEGG:ns NR:ns ## COG: NMA2057 COG0206 # Protein_GI_number: 15794935 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division GTPase # Organism: Neisseria meningitidis Z2491 # 1 397 1 392 392 556 81.0 1e-158 MEFVYDVAESAASPAVIKVIGLGGGGCNAINNMIANIIQGVEFISANTDAQSLGKNNAAK RIQLGTNLTRGLGAGANPEIGRAAAQEDREAIEDAIRGANMLFITTGMGGGTGTGAAPVV AEIAKEMGILTVAVVTRPFGYEGKRVHIAQEGLEQLKGQVDSLIIIPNDKLMTALGEDVT MREAFRAADNVLRDAVAGISEVVTRPGFINLDFADVKNVMGIKGIAMMGSGFAQGIDRAR LATEQAISSPLLDNVTLDGARGVLVNITTAPDCLKMSEYREIMKVVNENAHPEAECKYGT AEDDNMGEDAIRVTIIATGLKENGSENQMRAAVRTQKLVSGNTEAAQSAQAGNVDGLVRT NRGIRSMNLTAADFSNQSVLDDFEIPAILRRQNNSDK >gi|257257242|gb|ACDX02000008.1| GENE 50 49835 - 50290 397 151 aa, chain + ## HITS:1 COG:no KEGG:NLA_19610 NR:ns ## KEGG: NLA_19610 # Name: not_defined # Def: hypothetical protein # Organism: N.lactamica # Pathway: not_defined # 1 151 1 151 151 125 62.0 4e-28 MNRRQFLGGTAVSLAAAASFARAHGHHDHKGHSHAAPAAASKTYEAARKAAAHCVEAGQI CLAHCIRLLSQGDTSMKDCATGVNQMLALCGALQNLAAQNSPLIPSLAKVCVEACKQCAA ACKQHAGHHAECKQCYESCLACIKECEKIAA >gi|257257242|gb|ACDX02000008.1| GENE 51 50704 - 51504 305 266 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 7 236 2 230 245 122 31 1e-26 MSSVPFIEMKDVAFAYGDRPILNNINFSIPQGNFAAVMGGSGSGKTTLMRLITGQIHPQS GKVVIEGRDLAGFSADELYEHRRRMGVLFQHGALFTDLSVFDNIAFPMRELTRLPEAVIR DLVLLKLNAVGLRGVENLMPSELSGGMSRRVALARTIALDPEIMLYDEPFTGLDPISLGV IAHLISRVNKALRSTSIMVTHDIERSLEIVDQVIFLAHGEIMFSGSPQEMRELDSPWVRQ FVGGLADGPVAYRYPAQTSLQQDLLG >gi|257257242|gb|ACDX02000008.1| GENE 52 51641 - 52417 815 258 aa, chain + ## HITS:1 COG:NMA0486 KEGG:ns NR:ns ## COG: NMA0486 COG0767 # Protein_GI_number: 15793485 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: ABC-type transport system involved in resistance to organic solvents, permease component # Organism: Neisseria meningitidis Z2491 # 1 258 1 258 258 421 97.0 1e-118 MNFIRSVGAKTLGFIQSLGSITLFLLNILAKSGTAFVRPRLSVRQVYFAGVLSVLIVAVS GLFVGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAMTSEIGL MKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIYGAYLVGVTWLGLDS GIFWSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFHCVPTSEGILRASTRTVVSS ALTILAIDFVLTALMFTE >gi|257257242|gb|ACDX02000008.1| GENE 53 52468 - 52965 737 165 aa, chain + ## HITS:1 COG:NMA0487 KEGG:ns NR:ns ## COG: NMA0487 COG1463 # Protein_GI_number: 15793486 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: ABC-type transport system involved in resistance to organic solvents, periplasmic component # Organism: Neisseria meningitidis Z2491 # 1 165 1 164 164 247 87.0 9e-66 MKKNVLEFWVGLFVLLGVAAVGFLAFRVAGGVAFGNSGKTYTVYADFSDIGGLKANAPIK SAGVLVGRVGSIELDPKSYQAKVRLDLDSKYQFSSDVSAQILTSGLLGEQYIGLQQGGDT ENLAAGDTISVTSSAMVLENLIGKFMTSFAEKNAVGGDDAAKATE >gi|257257242|gb|ACDX02000008.1| GENE 54 53005 - 53595 1087 196 aa, chain + ## HITS:1 COG:NMA0488 KEGG:ns NR:ns ## COG: NMA0488 COG2854 # Protein_GI_number: 15793487 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: ABC-type transport system involved in resistance to organic solvents, auxiliary component # Organism: Neisseria meningitidis Z2491 # 1 196 1 196 196 335 93.0 4e-92 MKKTSFISALSIGILSISMAVAAPADAVNQIRQNATQVLSILKNGDANTARQKAEAYAIP YFDFQRMTALAVGNPWRTASDTQKQALTKEFQTLLIRTYSGTMLKFKNANVNVKDNPVVN KGGKEIIVRAEVSVPGQKPVNMDFTTYQSGNKYRAYNVAIEGASLVTVYRNQFGEIIKAK GVDGLIAELKAKNGSK >gi|257257242|gb|ACDX02000008.1| GENE 55 53694 - 53972 421 92 aa, chain + ## HITS:1 COG:NMA0489 KEGG:ns NR:ns ## COG: NMA0489 COG3113 # Protein_GI_number: 15793488 # Func_class: R General function prediction only # Function: Predicted NTP binding protein (contains STAS domain) # Organism: Neisseria meningitidis Z2491 # 1 91 9 99 100 146 82.0 8e-36 MQTELRDGTLHISGDITVKTLTADAFTRFRQQCRLKDTHAVDLSGVGRADSACVSLLLDA LRRPDGKITLQGIPESVRTLSELYEIKDWLKP >gi|257257242|gb|ACDX02000008.1| GENE 56 53969 - 54769 1330 266 aa, chain + ## HITS:1 COG:NMB1961 KEGG:ns NR:ns ## COG: NMB1961 COG2853 # Protein_GI_number: 15677791 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Surface lipoprotein # Organism: Neisseria meningitidis MC58 # 1 265 1 272 275 383 72.0 1e-106 MKKTTASLLLLIGIASTPAFAETNPADPYEGYNRAVFKFNDKADQYVLAPVARGYRKITP KPVRTGVSNFFNNLRDVVSFGSNVLRLDVKRASEDLVRVGINTTFGLGGLIDVAGAGGVP DNKNTLGDTFATWGWKNSNYFVVPLLGPSTVRDTAGNAITTVYPVKSAVFHTPAGRWSTT GLNIVNTREALLDLTDGLEDAAIDKYSYTRDLYMKVRSRQTGGTLPQGEDDNIDIDELVD SDAPGATDFAEPLPQSAAEFEPIPAE >gi|257257242|gb|ACDX02000008.1| GENE 57 54828 - 55979 1447 383 aa, chain + ## HITS:1 COG:NMA0069 KEGG:ns NR:ns ## COG: NMA0069 COG0763 # Protein_GI_number: 15793098 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipid A disaccharide synthetase # Organism: Neisseria meningitidis Z2491 # 5 382 6 383 384 610 82.0 1e-174 MMNHSPLIAISVGEASGDLLGAHLIRAIKQRRPDAKFIGIGGERMKAEGFESLYDQEKLA VRGFVEVVKRLPEILKIRKGLVNDLIRIKPDVFVGIDAPDFNLGVAEKLKKAGIPTVHYV SPSVWAWRRERVNKIVHQVNRVLCLFPMEPQLYLDAGGKAEFVGHPMAQTMPLDDDRAAA RAKLGVADEAVVFALLPGSRVSEIDYMAPLFFQTALLLLKRYPQAQFLLPAATAATRRRI GEILAQPEFSVIPVTITDKQSDTVCTAADVVLVTSGTATLEVALCKRPMVISYKISPLTY FYVKRKVKVPHVGLPNILLDKAAVPELLQHDAEPEKLAAAVAYWYDHPEAAAALKQDFRE LHLLLKKDTDALAAEAVLSEAGF >gi|257257242|gb|ACDX02000008.1| GENE 58 56523 - 57113 776 196 aa, chain + ## HITS:1 COG:NMB0192 KEGG:ns NR:ns ## COG: NMB0192 COG0164 # Protein_GI_number: 15676119 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HII # Organism: Neisseria meningitidis MC58 # 4 195 3 194 194 298 82.0 4e-81 MSPILLAGVDEAGRGPLVGSVFAAAVILPERYDLPGLTDSKKLSEKKRDTLAVLIKEQAV SWSVASASSEEIAELNILHATMLAMTRAVQGLVVVPDKVLIDGNRVPKDLGIPAEAIVKG DSKIIEISAASVLAKTARDAEMYALAERYPQYGFDQHKGYGTAQHLAALQKYGVLPEHRR DFAPVKALLAQGRLFE >gi|257257242|gb|ACDX02000008.1| GENE 59 57315 - 58274 1044 319 aa, chain + ## HITS:1 COG:NMA0909 KEGG:ns NR:ns ## COG: NMA0909 COG0385 # Protein_GI_number: 15793875 # Func_class: R General function prediction only # Function: Predicted Na+-dependent transporter # Organism: Neisseria meningitidis Z2491 # 1 314 1 314 315 388 78.0 1e-108 METIARISHFVGKTFSFWAALCAAVAFFDPELFKWVLPYITWLLGIIMFGMGLTLTPSDF KIVASHPKAVLIGVAAQFIIMPLTAYFLVKLLNLPAEVAVGVILVGCCPGGTASNVMTFL ARGNVALSVAVTSASTLLAPLLTPAIFLLLAGEMLDINAQAMFVSIVQMVLLPITLGVIA HTVFRKQTERAAAALPLVSVVAIVLIIGAVVGASKGKIIESGLLIFGVVVLHNAIGYLLG FFAAKICKLPYDAQKTLAIEVGMQNSGLGAALAAAHFAAAPVVAVPSALFSVWHNISGSL LASYWSAKADKESKAELSD >gi|257257242|gb|ACDX02000008.1| GENE 60 58365 - 59747 1363 460 aa, chain - ## HITS:1 COG:NMA0184 KEGG:ns NR:ns ## COG: NMA0184 COG0790 # Protein_GI_number: 15793212 # Func_class: R General function prediction only # Function: FOG: TPR repeat, SEL1 subfamily # Organism: Neisseria meningitidis Z2491 # 21 459 18 458 468 287 47.0 3e-77 MTIIPKRLSLQDIVPTEPPFEGNLRDFLPLRQIMEDGDEGAVYRMCGILLGGKENRRALS GVEYIASGGFPDTAYRLLHWSDRFGLSADKLLDAYADFGERGFLAAQTALMRYYAERNDL QFLYWAQCAAPQSPEAQYLIARQYALAGNWEKALNWYNQAASQGWGQACLQLGKSFLYGC GVSADSAQAEAYLEYAAEHGWVEAQILLADLLAAKGNKDALSWYSLAAVQGSAAAQTALA RQYLTGKLTDRDPLQAFKYARTAADRQFPDALCLMGDLCRYGLGIRPDLSVAQQYYRHAA ALGSMAAVQKLLSEAALHQPEHYEKLKSEALQRQETEQLCRSAAACLDGIGQKKDYARAR RLYLEAAVCNHADAAAGLGKIYYYGLGISADAGSAAYWFGIAAEQNHPEAQYYSAFLLYH GQGTAMNVPAAYDYLQAAADNGYGNPQELRAILEQWQCER >gi|257257242|gb|ACDX02000008.1| GENE 61 60023 - 60571 866 182 aa, chain - ## HITS:1 COG:NMA0594 KEGG:ns NR:ns ## COG: NMA0594 COG1949 # Protein_GI_number: 15793584 # Func_class: A RNA processing and modification # Function: Oligoribonuclease (3'->5' exoribonuclease) # Organism: Neisseria meningitidis Z2491 # 3 179 2 178 187 313 87.0 1e-85 MTQNANNLCWLDMEMTGLDPERERIIEVAMIITDSDLNVLAQSEVYVVHQSDELLDGMDE WNTATHGRTGLTRRVRESQLTEAEVEQKLLDFIAQWIPEKATPMCGNSIHQDRRFMVKYM PRLEAYFHYRNLDVSTLKELAKRWNPPVAKGVVKRGSHQALDDILESIEEMRYYRENFLK LP >gi|257257242|gb|ACDX02000008.1| GENE 62 60773 - 61561 1350 262 aa, chain + ## HITS:1 COG:NMA2152 KEGG:ns NR:ns ## COG: NMA2152 COG0623 # Protein_GI_number: 15795023 # Func_class: I Lipid transport and metabolism # Function: Enoyl-[acyl-carrier-protein] reductase (NADH) # Organism: Neisseria meningitidis Z2491 # 1 260 1 260 261 479 96.0 1e-135 MGFLQGKKILITGMISERSIAYGIAKACREQGADLAFTYVVDKLEERVRKMAAELGSELV FRCDVASDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEIS AYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPNYNVMGMAKASLEAGIRFTAACLGK EGIRCNGISAGPIKTLAASGIADFSKLLGHVASHNPLGRNVTIDEVGNTAAFLLSELSSG ITGEITYVDGGYSINALNDEEA >gi|257257242|gb|ACDX02000008.1| GENE 63 61844 - 62293 831 149 aa, chain + ## HITS:1 COG:PM1564 KEGG:ns NR:ns ## COG: PM1564 COG1970 # Protein_GI_number: 15603429 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Large-conductance mechanosensitive channel # Organism: Pasteurella multocida # 1 148 1 133 133 117 51.0 6e-27 MSIASEFKQFIMRGNVIDLAVGMVVGTAFSGIVKSLVDDVIMPPIGLLIGGVDFSNLFIT LKDGAQAAPEGGYASLAAAQAAGAVTLNIGLFINAVISFLIIAAAIFTVIKALNAMKKAE ATAAAEEAPAEPSEEVLLLREIRDSLNKK >gi|257257242|gb|ACDX02000008.1| GENE 64 62496 - 63326 330 276 aa, chain + ## HITS:1 COG:no KEGG:UMN179_01048 NR:ns ## KEGG: UMN179_01048 # Name: not_defined # Def: hypothetical protein # Organism: G.anatis # Pathway: not_defined # 1 276 1 276 276 514 92.0 1e-144 MNNVDLSALFRGMQGQMQSQLSTNREFIHHPGSKGDALENAWIEWLQNYLPNRYSVDKAI VIDYHGNTSDQIDIVIYDNWFTPFIFNQNGFKYIPAEGVYAVFEVKPDIQGNVGKINYIQ YAGQKIASVRRLDRTSTSMINSGKKQPARPLTKIIGGILTTTNSFTHSNNATIESHIRSL TDLEGIDLGCIVNYGSFFVQYQGEEDINETADFRKRICDYYHNRTFQSLVFSQPENSLIT FFMQLTRYLQQAIGTVPAIDLQAYMNTIGEEIDSEI >gi|257257242|gb|ACDX02000008.1| GENE 65 63543 - 64448 1239 301 aa, chain - ## HITS:1 COG:NMA0441 KEGG:ns NR:ns ## COG: NMA0441 COG1281 # Protein_GI_number: 15793446 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Disulfide bond chaperones of the HSP33 family # Organism: Neisseria meningitidis Z2491 # 1 290 27 316 328 477 83.0 1e-134 MPQTQINHADIRTRFIFDDMPVRGLHVRLENVWTHIVGQKHYPAAIRRALGELLAAGALL SGNLKTDGTLIVQVQGQGRLKMLVVEATSDQTVRATARWDETADINDDESLTDLLGSNSV FVLTLQPKDAEPWQGVVPLEGSSIAQMLINYTKRSEQLDTQIVLASSDDACGGLLVQRLP ETEPDAASWEHVSTLVQTLTSEELTGLDAQHVLYRLFHETPPRVFDPENIEFACTCSRGK VSDMLLMLGGEEVGGVVAEQGSIQIDCDFCHAKYVFDETDVNALFGADVVNAVLDEAKRL Q >gi|257257242|gb|ACDX02000008.1| GENE 66 64608 - 66251 2222 547 aa, chain - ## HITS:1 COG:MA1861 KEGG:ns NR:ns ## COG: MA1861 COG0661 # Protein_GI_number: 20090711 # Func_class: R General function prediction only # Function: Predicted unusual protein kinase # Organism: Methanosarcina acetivorans str.C2A # 12 546 12 558 559 310 33.0 4e-84 MMIPTLLAMRDFSRMREIITVLTKYGLGSFVQRIRLGAAGGDEVHPDSRYMSTPRRFRKA FEELGPTFVKLGQVLSTRVDIFGAEWIEEFEQLQSNVAPIPSSEIYTLVEAYLGKPVSEV FRSIDPKPAGSASVAQVHRAELLDGTAVAVKVKRPDIEPVIQADLRILNHLARLMESEIP EVRRYQPVLMVAYFAKSLAKETDLSVELRYMQRFGQTFSDDPLVRIPAVYPDISNRHILV QDYIGGTLLKDADLETMPHTLRSALAGRITDTLFTMMLRQGFFHADPHPGNIFINDNGGI TFIDFGLVGHLGNTRRREILNLINALTNNDALLIQYVLSDWAQGDLPDENLLGADVLEML LNYEHTAVRDLRVSQVINDITSIMRRHGLTLPGDLVMLFKTLITLEGVVKRLDGGVELLE RAKPITEAAVKEQASAAHIARNAKTQLRTLLQMAGALPQDFFRLTRMLQKGKFGITLDLK HSDRISHQIDSAANRLTMGIVTAALIIGSSIVMSIETGPKFIGFVGYLIAFANSLWIIWS VWRSGKH >gi|257257242|gb|ACDX02000008.1| GENE 67 66467 - 67081 511 204 aa, chain + ## HITS:1 COG:NMB2001 KEGG:ns NR:ns ## COG: NMB2001 COG0791 # Protein_GI_number: 15677829 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell wall-associated hydrolases (invasion-associated proteins) # Organism: Neisseria meningitidis MC58 # 1 204 15 251 251 245 58.0 4e-65 MLSGIHFANADDLDSFVKNRQQVLNQFEDAKQPAPAQAPQINFQPARAATPVVHSIPSAS AAPVRASRSSDSADELIGSAMGLLGVAYRYGGTSASTGFDCSGFMQHIFRRSMGLNLPRT SAEQAKMGVGISRGELQPGDMVFFRTMGRGRISHVGLYIGNDRFIHAPRTGKRIEITSLS NKYWNAKYAFARRVKKNDPSRFLN >gi|257257242|gb|ACDX02000008.1| GENE 68 67106 - 67318 315 70 aa, chain + ## HITS:1 COG:no KEGG:NMC1979 NR:ns ## KEGG: NMC1979 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 69 3 71 72 119 88.0 3e-26 MPEMPKWYDDDGQIVSCTEKVKVMTENMTELYQAAQDAFEDALLMGCSEKQLREYLQALI EGVENPYRKA >gi|257257242|gb|ACDX02000008.1| GENE 69 67650 - 69074 751 474 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 [Haemophilus influenzae 22.4-21] # 15 458 10 456 456 293 38 2e-78 MDNFTESLHQWVQKINDPMWAGLVYVLLGAGLFFTLATGFVQFRLLGRSIKEMLGGRKQG DDPHGITPFQAFVTGLASRVGVGNIAGVAIAIKLGGPGAVFWMWVTALIGMSSAFVESSL AQLFKVRDYDNHHFRGGPAYYITQGLGQKWLGVLFALSLIFCFGFVFEAVQTNTIADTTK AAWGWDQHYVGVALVILTAPIIFGGIRRVSKAAEIIVPLMAVLYLVIALFIIVTNISLIP DVFGQIFSNAFNFDSAAGGFLGGLISTTMMQGIKRGLYSNEAGMGSAPNAAAAAEVKHPV SQGMIQMLGVFVDTIIVCSCTAFIVLTYQQPYGDLSGAALTQVAIVSQVGEWGAGFLAVI LFMFAFSTVIGNYAYAESNVQFIKSHWLVTAVFRMLVLAWVYFGAIAKVPLVWDMADMAM GIMAWINLVAILLLSPLAFLLLKDYTAKLKMGKDPVFKLSEHPGLKRKIKSDIW >gi|257257242|gb|ACDX02000008.1| GENE 70 69214 - 69837 988 207 aa, chain - ## HITS:1 COG:NMA0077 KEGG:ns NR:ns ## COG: NMA0077 COG0357 # Protein_GI_number: 15793106 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division # Organism: Neisseria meningitidis Z2491 # 1 206 1 206 207 314 74.0 9e-86 MTPTQQLQSGIQALGLDLSAEQQTLLLAYTDLLKKWNKTYNLTALRDEAQMVSHHLLDSL TLLPYLQGAQTMLDVGSGGGQPGIPTAICHPDLNITLLDANTKKTAFLQQAVIELGLANV RVVSGRVEAVQDFQADIITSRAFAELADFVNWTAHLLKDGGRWVAMKGVYPEEEIAKLPD TVAVERVEALQVPGLDAERHMVVLKKV >gi|257257242|gb|ACDX02000008.1| GENE 71 70102 - 70449 334 115 aa, chain - ## HITS:1 COG:no KEGG:CtCNB1_2601 NR:ns ## KEGG: CtCNB1_2601 # Name: not_defined # Def: hypothetical protein # Organism: C.testosteroni # Pathway: not_defined # 10 107 3 100 113 80 43.0 2e-14 MPSHHNILPAEEFVRRWLNFKKSYLSELKNRRSVSATAQKINMLELTDKQRRLFDSALES ALDDIMYSLLLGLDGEAEIGGIQESFTILNENGETVSPCGELSDAAYMLIRQTEN >gi|257257242|gb|ACDX02000008.1| GENE 72 70460 - 71458 209 332 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit [Lactobacillus helveticus DPC 4571] # 96 313 82 279 285 85 33 1e-15 MKTHAISKDSVSLITVAEHEAGQRLDNYLIKILKGVPKSHIHRIIRAGEVRLNKKRCKPD SRIQTGDLLRIPPVRTAEKQRSSENRAQAVPAREFDIIYEDDALLVIDKPAGVAVHGGSG VSFGVIEQIRRARPEARYLELVHRLDKDTSGLLMIAKKRSALVKLHEAIRNDHPKKIYLA LGVGKLPNDSFHVKLPLFKYTGAQGEKMVRVSEDGQSAHTIFHVLNRFSDDLLHQVGLSH LTLVQATLKTGRTHQIRVHLQSQQCPIAGDERYGDYQANKRLQKLGLKRMFLHAAELHLN HPLTGEKLILKAPLPQELAQFVLMLENAGKVV >gi|257257242|gb|ACDX02000008.1| GENE 73 72024 - 75056 3855 1010 aa, chain + ## HITS:1 COG:NMA0071 KEGG:ns NR:ns ## COG: NMA0071 COG1530 # Protein_GI_number: 15793100 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonucleases G and E # Organism: Neisseria meningitidis Z2491 # 1 803 1 796 919 1127 81.0 0 MKRMLFNATQAEELRVAIVDGQNLLDLDIETLGKEQRKGNIYKGIITRIEPSLEACFVDY GTDRHGFLPFKEVSRSYFRDYEGGRARIQDVLKEGMEVIVQVEKDERGNKGAALTTFISL AGRYLVLMPNNPRGGGVSRRIEGEERQELKAAMAELDIPNGMSIIARTAGIGRSAEELEW DLNYLKQLWQAIEEAGKAHHDPYLLFMESSLLIRAIRDYFRPDIGEILVDNQEVYEQVAE FMSYVMPSNVGRLKLYQDHTPLFSRFQIEHQIESAFARSVSLPSGGAIVIDHTEALVSID VNSARATRGSDIEDTAFKTNMEAAEEVARQMRLRDLGGLVVIDFIDMENPKHQRDVENVL RDALKKDRARVQMGKLSRFGLLELSRQRLKPALGESSHVACPRCAGTGVIRGIESTALHV LRIIQEEAMKDNTGEVHAQVPVDVATFLLNEKRAELFAMEERLDVNVVLIPNIHLENPHY EINRIRIDDVEEDGEPSYKRVAEPEEDESAKPFGSERAKAARPEPAVKGVRHTQPAPTVA EQKNGSWWDSFKAWLKRIFGGNTAAETAPVAEVAEKRTSGSNNRNGNSGNRRANNRRQNP RRNNRHDGSKVEVREVADFKDKAADNQAAENETRNAKDNRRSHNRQNERNAAAEAENLEV QALAAATSSENESRSDEQAQGNKRRRNNNRNERNREQADIRAEETLSEAVDNVAEEGVQT ADTDAPKGNERRQRDRNNQRDRRERNNQRDRRQNGKKRNIPSAAKIEQYLNIHDTADKVL FAAAHVMGDTVEEEPFAVTIPAPEDSGEPLVVVVSEPVTVAEEAFVFSIEGEDVDSDILI EDSTDDECSIIDSAIGSVEETSTSVFAIETEDGYQPMTAVPAEGEAEAVVEMEEELVVWK AEREAAAAIEALAAAAAAAAAAQATESEPQTVPEAGQAEATEPEETVPAVAAMPDLGGLV FVETNPEAVAAFAKQVQPEPESGLRRADVPKVEAEPVAATEMVLVETRKD >gi|257257242|gb|ACDX02000008.1| GENE 74 75158 - 75364 132 68 aa, chain - ## HITS:1 COG:no KEGG:NMC0872 NR:ns ## KEGG: NMC0872 # Name: not_defined # Def: putative integral membrane protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 68 1 68 68 99 75.0 6e-20 MKIIRDIAIWIAITVWINFYPDRYRYDTVPQGRHGYWHINHPWYPYARFLLPLLLAVWIA YKHCQKRK >gi|257257242|gb|ACDX02000008.1| GENE 75 75687 - 76901 1625 404 aa, chain + ## HITS:1 COG:NMA0047 KEGG:ns NR:ns ## COG: NMA0047 COG0477 # Protein_GI_number: 15793078 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Neisseria meningitidis Z2491 # 1 404 1 404 405 582 82.0 1e-166 MTHTQQKSPNLWLVIAAAAAILLITIGMRMTMGLFVRPVVDSTELSIQEFSLIIAVFQLM WGVSQPLSGALADRFGAFKVLGGGALLLVCACLMVPQMPTYWGLMLAIGLLFAFGTGAGG FSIIMGQVAAKVPPHKRGLASGLVNAGGSAGQFLFAPLVQGLLVLPAVGWTGTFYVWGGI ALLILPISWWLAGGKNAVATHHTSSENGQSLGQAVKAAFKDRSYILLHLGFFTCGFHIAF LVTHLPNEIALCGLPASVASTSIAIIGLANIAGCIFSGWCTGRFLGKYVLFGLYASRVAM VLIYLAAPRTDVNFYIFAAALGFTWLATVAPTAAITGKLFGTRYLATLFGLTMLSHQIGG FLGSYIGGIVIYRFNDYGWMWYADAVLAGMAALLNLPIREKKAA >gi|257257242|gb|ACDX02000008.1| GENE 76 77045 - 78328 1025 427 aa, chain + ## HITS:1 COG:NMB0360 KEGG:ns NR:ns ## COG: NMB0360 COG0477 # Protein_GI_number: 15676275 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Neisseria meningitidis MC58 # 1 426 1 426 427 544 70.0 1e-154 MTDSQPSTMQRIFSRNMLICIFTGFTSGLPLYFLYSLIPAWLRLEKIDLKTIGLFALIGF PYTWKFIWSPLLDSVRLPFLGLRRGWMLVMQIALLLLLAAYAFVRPQEHLSIILGLSLVV AFFSASQDIVIDAFRREVLSDEELVLGNSLYVNAYRISSLIPASLSLILADRMPWSSVFI ITALFMIPGLLATLFVAREPAQQPVGAKGFKDTVVEPFRDFFTRQSVKQALIILAFIVLY KLGDSMATALAPAFYIDMGFSATDIGLIAKNAGLWPAVIFGIIGGIWVNKLGVNRALWLF GLVQWVTILGFAWLASFGHFEHVGASERTMLAVVIAAEAVGVGLGTVAFVSYMAQQTNTA FTATQFALLSSLSAVPRTFMNATAGFLIEAMGYVNFFWLCFMLGIPGMLLLFKVAPWNGD KAKQSAV >gi|257257242|gb|ACDX02000008.1| GENE 77 78631 - 79275 1066 214 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15676069|ref|NP_273200.1| 50S ribosomal protein L3 [Neisseria meningitidis MC58] # 1 214 1 214 214 415 99 1e-115 MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDADGYTAVQVTFGQKKANR VNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV VRVDAERQLLLVKGAVPGAVNSDVVVRPSVKVGA >gi|257257242|gb|ACDX02000008.1| GENE 78 79275 - 79895 1031 206 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15676070|ref|NP_273201.1| 50S ribosomal protein L4 [Neisseria meningitidis MC58] # 1 206 1 206 206 401 99 1e-111 MELKVIDAKGQVSGSLSVSDALFAREYNEALVHQLVNAYLANARSGNRAQKTRAEVKHST KKPWRQKGTGRARSGMTSSPLWRKGGRAFPNKPDENFTQKVNRKMYRAGMATILSQLARD ERLFAIEALTAETPKTKVFAEQVKNLGLEQVLFVTKQLDENVYLASRNLPNVLVLEAQQV DPYSLLRYKKVIITKDAVAQLEEQWV >gi|257257242|gb|ACDX02000008.1| GENE 79 79886 - 80206 507 106 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|218767166|ref|YP_002341678.1| 50S ribosomal protein L23 [Neisseria meningitidis Z2491] # 1 106 1 106 106 199 100 4e-50 MGMNQQRLTQVILAPIVSEKSNVLAEKRNQMTFKVLANATKPEIKAAVELLFGVQVASVT TVTTKGKTKRFGRTLGRRSDVKKAYVSLAAGQELDLEAAAAAADKE >gi|257257242|gb|ACDX02000008.1| GENE 80 80212 - 81045 1448 277 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|121634019|ref|YP_974264.1| 50S ribosomal protein L2 [Neisseria meningitidis FAM18] # 1 277 1 277 277 562 99 1e-159 MAIVKMKPTSAGRRGMVRVVTEGLHKGAPYAPLLEKKNSTAGRNNNGHITTRHKGGGHKH HYRVVDFKRNKDGIPAKVERIEYDPNRTAFIALLCYADGERRYIIAPRGIQAGAVLVSGA EAAIKVGNTLPIRNIPVGTTIHCIEMKPGKGAQIARSAGASAVLLAKEGAYAQVRLRSGE VRKINVDCRATIGEVGNEEQSLKKIGKAGANRWRGIRPTVRGVVMNPVDHPHGGGEGRTG EAREPVSPWGTPAKGYRTRNNKRTDNMIVRRRYSNKG >gi|257257242|gb|ACDX02000008.1| GENE 81 81051 - 81329 477 92 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15676073|ref|NP_273204.1| 30S ribosomal protein S19 [Neisseria meningitidis MC58] # 1 92 1 92 92 188 100 1e-46 MARSLKKGPYVDLHLLKKVDAARASNDKRPIKTWSRRSTILPDFIGLTIAVHNGRTHVPV FISDNMVGHKLGEFSLTRTFKGHLADKKAKKK >gi|257257242|gb|ACDX02000008.1| GENE 82 81338 - 81667 537 109 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15676074|ref|NP_273205.1| 50S ribosomal protein L22 [Neisseria meningitidis MC58] # 1 109 1 109 109 211 99 1e-53 MRVNAQHKNARISAQKARLVADLIRGKDVAQALNILTFSPKKGAELIKKVLESAIANAEH NNGADIDELKVVTIFVDKGPSLKRFQARAKGRGNRIEKQTCHINVTVGN >gi|257257242|gb|ACDX02000008.1| GENE 83 81677 - 82372 1140 231 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225076401|ref|ZP_03719600.1| hypothetical protein NEIFLAOT_01446 [Neisseria flavescens NRL30031/H210] # 1 231 1 230 230 443 96 1e-123 MGQKINPTGFRLAVTKDWASKWFAKSTDFSAVLKQDIDVRNYLRKKLANASVGRVVIERP AKSARITIHSARPGVVIGKKGEDIEVLKRDLQALMGVPVHVNIEEIRKPELDAQIIADGI AQQLEKRVQFRRAMKRAMQNAMRSGAKGIKIMTSGRLNGADIARSEWYREGRVPLHTLRA NVDYATSEAHTTYGVLGLKVWVYTEGSVKTSAKPEHEKKQRKAGGRNAAAN >gi|257257242|gb|ACDX02000008.1| GENE 84 82356 - 82772 704 138 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225076402|ref|ZP_03719601.1| hypothetical protein NEIFLAOT_01447 [Neisseria flavescens NRL30031/H210] # 1 138 1 138 138 275 98 5e-73 MLQPTRLKYRKQQKGRNTGIATRGNKVSFGEFGLKAVGRGRLTARQIEAARRTMTRHIKR GGRIWIRVFPDKPITEKPIQVRMGGGKGNVEYYIAEIKPGKVLYEMDGVPEALAREAFEL AAAKLPIPTTFVVRQVGQ >gi|257257242|gb|ACDX02000008.1| GENE 85 82772 - 82963 304 63 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15676077|ref|NP_273208.1| 50S ribosomal protein L29 [Neisseria meningitidis MC58] # 1 63 1 63 63 121 96 1e-26 MKANELKDKSIEQLNADLLDLLKAQFGLRMQNATGQLGKPSELKRVRRDIARIKTILTEK GAK >gi|257257242|gb|ACDX02000008.1| GENE 86 82963 - 83226 423 87 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225076404|ref|ZP_03719603.1| hypothetical protein NEIFLAOT_01449 [Neisseria flavescens NRL30031/H210] # 1 87 1 87 87 167 97 2e-40 MSENKNVRTLQGKVVSDKMDKTVTVLVERKVKHPLYGKIIRLSTKIHAHDENNQYGIGDV VVIAESRPLSKTKSWVVKELVEKARTV >gi|257257242|gb|ACDX02000008.1| GENE 87 83452 - 83820 604 122 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15676079|ref|NP_273210.1| 50S ribosomal protein L14 [Neisseria meningitidis MC58] # 1 122 1 122 122 237 100 2e-61 MIQMQTILDVADNSGARRVMCIKVLGGSKRRYASVGDIIKVAVKDAAPRGRVKKGDVYNA VVVRTAKGVRRPDGALIKFDNNAAVLLNNKLEPLGTRIFGPVTRELRTERFMKIVSLAPE VL >gi|257257242|gb|ACDX02000008.1| GENE 88 83832 - 84155 522 107 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225076406|ref|ZP_03719605.1| hypothetical protein NEIFLAOT_01451 [Neisseria flavescens NRL30031/H210] # 1 107 1 107 107 205 95 7e-52 MNKIIKGDQVVVITGKDKGKQGQVVRVLGGKVVVEGVNVVKRHQKPNPMRGIEGGIVSKE MPLDISNVAILNPETNKADRVGIKLIENEGKVKRVRFFKSNGSVIGA >gi|257257242|gb|ACDX02000008.1| GENE 89 84165 - 84704 904 179 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225076407|ref|ZP_03719606.1| hypothetical protein NEIFLAOT_01452 [Neisseria flavescens NRL30031/H210] # 1 179 1 179 179 352 99 3e-96 MARLREFYKDTVVPELVKQFGYKSVMEVPRIEKITLNMGVGEAVADKKVMEHAISDLEKI AGQKPVVTVARKSIAGFKIRDNYPVGCKVTLRRDQMFEFLDRLITIALPRVRDFRGVSGK SFDGRGNYNMGVREQIIFPEIEYDKIDALRGLNITITTTAKTDEEAKALLSLFKFPFKG >gi|257257242|gb|ACDX02000008.1| GENE 90 84707 - 85012 504 101 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225076408|ref|ZP_03719607.1| hypothetical protein NEIFLAOT_01453 [Neisseria flavescens NRL30031/H210] # 1 101 1 101 101 198 100 8e-50 MAKKALINRELKRQALAKKFAAKREAIFAVINDANATEEERFEARLKFQSIPRNAAPVRQ RRRCALTGRPRGTFRKFGLGRIKIREIAMRGEIPGVVKASW >gi|257257242|gb|ACDX02000008.1| GENE 91 85027 - 85419 625 130 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225076409|ref|ZP_03719608.1| hypothetical protein NEIFLAOT_01454 [Neisseria flavescens NRL30031/H210] # 1 130 1 130 130 245 96 8e-64 MSMHDPISDMLTRIRNAQRANKVVVAMPSSKLKCAIAKVLKEEGYIEDFSVSADAKPVLE IQLKYYAGRPVIEQIKRVSRPGLRIYKASSEIPNVMNGLGIAIVSTSKGVMTDRKARSEG VGGELLCIVA >gi|257257242|gb|ACDX02000008.1| GENE 92 85433 - 85966 873 177 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|241759663|ref|ZP_04757764.1| ribosomal protein L6 [Neisseria flavescens SK114] # 1 177 1 177 177 340 98 1e-92 MSRVAKNPVTVPAGVEVKFGTEALVIKGKNGELSFPLHSDVAIELNDGKLTFAAKNDSKQ ANAMSGTARALVNNMVKGVSEGFEKKLQLIGVGYRAQAQGKVLNLSLGFSHPIVYEMPEG VSVQTPSQTEIVLTGADKQVIGQVAAEIRAFRSPEPYKGKGVRYVGEVVVMKEAKKK >gi|257257242|gb|ACDX02000008.1| GENE 93 85980 - 86333 561 117 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15676085|ref|NP_273216.1| 50S ribosomal protein L18 [Neisseria meningitidis MC58] # 1 117 1 117 117 220 97 2e-56 MDKHATRLRRARKTRARIADLKMVRLCVFRSNNHIYAQVISAEGDKVLAQASTLEAEVRG SLKSGSNVEAAAVVGKRIAEKAKAVGVEKVAFDRSGFQYHGRVKALAEAARENGLSF >gi|257257242|gb|ACDX02000008.1| GENE 94 86351 - 86869 869 172 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225076412|ref|ZP_03719611.1| hypothetical protein NEIFLAOT_01457 [Neisseria flavescens NRL30031/H210] # 1 172 1 172 172 339 99 4e-92 MAKHEIEERGDGLIEKMVAVNRVTKVVKGGRIMAFSALTVVGDGDGRIGMGKGKSKEVPV AVQKAMDQARRSMIKVPLKNGTIHHEVIGRHGATKVFMQPAKEGSGVKAGGPMRLVFDAM GIHNISAKVHGSTNPYNIVRATLDGLSKLYTPADIAAKRGLTVEDILGASHD >gi|257257242|gb|ACDX02000008.1| GENE 95 86862 - 87047 295 61 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225076413|ref|ZP_03719612.1| hypothetical protein NEIFLAOT_01458 [Neisseria flavescens NRL30031/H210] # 1 61 1 61 61 118 96 1e-25 MTEQKKIKVTLVKSLIGTIESHRACARGLGLRHREHTVEVLDTPQNRGMINKISYLLKVE S >gi|257257242|gb|ACDX02000008.1| GENE 96 87049 - 87483 669 144 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|241759618|ref|ZP_04757719.1| ribosomal protein L15 [Neisseria flavescens SK114] # 1 144 1 144 144 262 91 6e-69 MFLNSIQPAEGATHARRRAGRGIGSGLGKTGGRGHKGQKSRSGGFHKVGFEGGQMPLQRR LPKRGFKSLTAAANAEIRLNELNLLAVNEIDVLVLKQAGLVPAAVSNVKVIASGELSKAV VLKGIKATKGAKAAIEAAGGKVEE >gi|257257242|gb|ACDX02000008.1| GENE 97 87497 - 88801 1063 434 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 [alpha proteobacterium BAL199] # 1 423 8 437 447 414 50 1e-114 MANQQSLSGLSKFGDLKKRLTFLLGALVVFRIGAHIPVPGVDAVALAKLYESAGNGILGM LNMFSGGSLERFSIFAIGIMPYISASIIVQLASEIVPSLKALKKEGEAGRKVITKYTRYG TVLLAILQSFGVATFVFQQGVVVTNSLEFHISTVVSLVTGTMFLMWLGEQITERGIGNGI SLIITAGIAAGIPSGISRLLALTSRGFGLPIAIVIGALLLIYIVVYFESAQRKVPVHYAK RQVGSGVMQGSNTHMPFKLNMAGVIPPIFASSIILFPSTLLSWFGPSDTGSLLHKIAGLL QHGQALYILLFTVAIIFFCYFYTALVFSPKEMAENLKKSGAFVPGIRPGKQTSQYLEQVV LRLTLFGALYITTICLIPEFLTTALNVPFYLGGTSLLILVVVTMDFSTQINSYRMTQQYE SLMSGLDMKSLSRK >gi|257257242|gb|ACDX02000008.1| GENE 98 88806 - 89024 237 72 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15610598|ref|NP_217979.1| translation initiation factor IF-1 [Mycobacterium tuberculosis H37Rv] # 1 70 1 71 73 95 63 8e-19 MAKEDTIQMQGEILETLPNATFKVKLENDHVVLGHISGKMRMHYIRISPGDKVTVELTPY DLTRARIVFRAR >gi|257257242|gb|ACDX02000008.1| GENE 99 89044 - 89157 195 37 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|34499619|ref|NP_903834.1| 50S ribosomal protein L36 [Chromobacterium violaceum ATCC 12472] # 1 37 1 37 37 79 97 6e-14 MRVQPSVKKICRNCKIIRRNRVVRVICTDPRHKQRQG >gi|257257242|gb|ACDX02000008.1| GENE 100 89223 - 89585 607 120 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|241759635|ref|ZP_04757736.1| 30S ribosomal protein S13 [Neisseria flavescens SK114] # 1 120 1 120 120 238 99 1e-61 MARIAGVNIPNNAHIVIGLQAIYGIGATRAKLICEAANIAPITKAKDLDEAQLDALREQV AKYEVEGDLRREVTMSIKRLMDMGCYRGFRHRRGLPCRGQRTRTNARTRKGPRKAIAGKK >gi|257257242|gb|ACDX02000008.1| GENE 101 89605 - 90000 666 131 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15676093|ref|NP_273224.1| 30S ribosomal protein S11 [Neisseria meningitidis MC58] # 1 131 1 131 131 261 100 1e-68 MAKANTASRVRKKVRKTVSEGIVHVHASFNNTIITITDRQGNALSWATSGGAGFKGSRKS TPFAAQVAAEAAGKVAQEYGVKNLEVRIKGPGPGRESSVRALNALGFKITSITDVTPLPH NGCRPPKKRRI >gi|257257242|gb|ACDX02000008.1| GENE 102 90016 - 90636 1022 206 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|241759655|ref|ZP_04757756.1| ribosomal protein S4 [Neisseria flavescens SK114] # 1 206 1 206 206 398 98 1e-110 MARYIGPKCKLARREGTDLFLKSARRSLDSKCKLDSAPGQHGAKKPRLSDYGLQLREKQK IRRIYGVLERQFRRYFAEADRRKGSTGELLLQLLESRLDNVVYRMGFGSTRAEARQLVSH KAITVNGQVVNIPSFQVKAGDVVAVREKAKKQVRIQEALSLATQIGLPSWVSVDADKLEG VFKNMPDRSELTGDINEQLVVEFYSK >gi|257257242|gb|ACDX02000008.1| GENE 103 90662 - 91648 595 328 aa, chain + ## HITS:1 COG:NMA0103 KEGG:ns NR:ns ## COG: NMA0103 COG0202 # Protein_GI_number: 15793131 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, alpha subunit/40 kD subunit # Organism: Neisseria meningitidis Z2491 # 1 328 1 328 328 602 95.0 1e-172 MQNSTTEFLKPRQIDVDTLSTTRAKVSMQPFERGFGHTLGNALRRILLSSMNGFAPTEVA ISGVLHEYSTVDGVQEDVVDILLNVKGIVFKLHGRGQVQLTLKKSGAGAVVAGDIELPHD VEILNPEHIICHLAENGQIEMEIKVEQGRGYQSVSGRRVVRDENRQIGAIQLDASFSPIS RVSFEVEPARVEQRTDLDKLVLDIETDGSIDPEEAVRSAARILIDQMSIFADLQGTPVEE VEEKAPPIDPILLRPVDDLELTVRSANCLKAEDIYYIGDLIQRTETELLKTPNLGRKSLN EIKEVLASKGLTLGSKLEAWPPVGLEKP >gi|257257242|gb|ACDX02000008.1| GENE 104 91673 - 92050 600 125 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|241759652|ref|ZP_04757753.1| ribosomal protein L17 [Neisseria flavescens SK114] # 1 119 1 119 124 235 100 6e-61 MRHRNGNRKLNRTSSHRAAMLRNMANSLLTHETIVTTLPKAKELRRVVEPLITLGKKPSL ANRRLAFDRTRDRDVVVKLFDELGPRFAARNGGYVRVLKYGFRKGDNAPLALVELVDKAD NTVSE >gi|257257242|gb|ACDX02000008.1| GENE 105 92567 - 93661 1430 364 aa, chain + ## HITS:1 COG:NMA0364 KEGG:ns NR:ns ## COG: NMA0364 COG0665 # Protein_GI_number: 15793372 # Func_class: E Amino acid transport and metabolism # Function: Glycine/D-amino acid oxidases (deaminating) # Organism: Neisseria meningitidis Z2491 # 1 364 1 364 366 637 94.0 0 MPRIAILGGGLCGRLTALQLAEQGLSVALFDKGGRKGENAAAYVAAAMLAPAAEAVEATP EVIKLGRQSIPLWRNIRGRLKTPTMMQENGSLIVWHGQDKPLSSEFVRHLKRGGVADDEI VRWRADDIAEREPQLGGRFSDGIYLPTEGQLDGRQMLSALADALDELNVPCHWEHECAPE DLQAQYDWLIDCRGYGAKTAWNQSSEHTSTLRGIRGEVARVYTPEITLNRPVRLLHPRYP LYIAPKENHVFVIGATQIESESQAPASVRSGLELLSALYAVHPAFGEADILEIATGLRPT LNHHNPEIRYSRARRLIEINGLFRHGFMISPAVTAAAVRLAVALFDGKDAPERDEESGLA YIEK >gi|257257242|gb|ACDX02000008.1| GENE 106 93713 - 94171 266 152 aa, chain + ## HITS:1 COG:VC1199 KEGG:ns NR:ns ## COG: VC1199 COG2020 # Protein_GI_number: 15641212 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Putative protein-S-isoprenylcysteine methyltransferase # Organism: Vibrio cholerae # 2 152 5 155 155 94 36.0 1e-19 MNLETKIPPPAICFICALLMYISVQVSALAGILPRFPILLSVVLMVFGTLLGVLGVWAFR RVRTTISPFNPEQTEHFVSDGVYRFSRNPMYAGMGCWLVAWAGYLAHPLPWLFLAAFVAY MTRFQIMPEERVLAQKFGAEYESYCRRVRRWL >gi|257257242|gb|ACDX02000008.1| GENE 107 94316 - 94963 418 215 aa, chain + ## HITS:1 COG:no KEGG:MS2110 NR:ns ## KEGG: MS2110 # Name: not_defined # Def: hypothetical protein # Organism: M.succiniciproducens # Pathway: not_defined # 35 214 39 217 220 223 57.0 5e-57 MIEQAIGNLSGIFWIFLLVIPLLFLKALLQNPKVKGRIGERAVRSVIGKDLDEETYIEFH DLIIPSRSCTTQIDHIYVSIFGIFVIETKNYTGWIFGSEKQSKWTQVVYKQKHYFQNPLR QNYAHIKALSELLKLPEEKFHSMVVFLGDCELKTQMPPNVCRIRQAASYIRRFQTTLLLP QEIEAATAVLSSNEYQADGEKLRAHTERLQERHQR >gi|257257242|gb|ACDX02000008.1| GENE 108 94980 - 95597 942 205 aa, chain + ## HITS:1 COG:NMB2069 KEGG:ns NR:ns ## COG: NMB2069 COG0352 # Protein_GI_number: 15677891 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate synthase # Organism: Neisseria meningitidis MC58 # 1 204 1 204 205 360 95.0 1e-100 MTFPPLKSPLKFYAVVPTADWVERMVKAGADTVQLRCKTLHGDELKREITRCVAACQGSR TQLFINDHWREAIEAGAYGVHLGQEDMDAADLAAIAAAGLRLGLSTHSVAELDRALSVHP SYVASGAIFPTTTKQMPTAPQGLDKLREYVKQAGGTPVVAIGGIDLNNARAVLATGVSSL AVVRAVIEAENPEAVVKAFQALWNE >gi|257257242|gb|ACDX02000008.1| GENE 109 95808 - 96002 286 64 aa, chain + ## HITS:1 COG:NMB2070 KEGG:ns NR:ns ## COG: NMB2070 COG2104 # Protein_GI_number: 15677892 # Func_class: H Coenzyme transport and metabolism # Function: Sulfur transfer protein involved in thiamine biosynthesis # Organism: Neisseria meningitidis MC58 # 1 64 1 64 64 103 93.0 6e-23 MNIILNGEPAELHGTTVADLIAQTAPQKPFAVAVNTGFVAKGAYAETVLNENDKVDIVRP VVGG >gi|257257242|gb|ACDX02000008.1| GENE 110 96161 - 96949 1038 262 aa, chain + ## HITS:1 COG:NMB2071 KEGG:ns NR:ns ## COG: NMB2071 COG2022 # Protein_GI_number: 15677893 # Func_class: H Coenzyme transport and metabolism # Function: Uncharacterized enzyme of thiazole biosynthesis # Organism: Neisseria meningitidis MC58 # 1 262 1 262 262 500 98.0 1e-141 MLTLYGETFPSRLLLGTAAYPTPEILKQSIQTAQPAMITVSLRRAGSGGEAHGQGFWSLL EESGVPVLPNTAGCQSVQEAVTTAQMAREVFETDWIKLELIGDDDTLQPDVFQLVEAAEI LIKDGFKVLPYCTEDLIACRRLLDAGCQALMPWAAPIGTGLGAVHAYALNVLRERLPDTP LIIDAGLGLPSQAAQVMEWGFDGVLLNTAVSRSGDPVNMARAFALAVESGRLAFEAEPVE ARTKAQASTPTVGQPFWHSAEY >gi|257257242|gb|ACDX02000008.1| GENE 111 97155 - 99956 3811 933 aa, chain + ## HITS:1 COG:NMA0462_2 KEGG:ns NR:ns ## COG: NMA0462_2 COG0749 # Protein_GI_number: 15793464 # Func_class: L Replication, recombination and repair # Function: DNA polymerase I - 3'-5' exonuclease and polymerase domains # Organism: Neisseria meningitidis Z2491 # 299 933 1 638 638 1140 93.0 0 MSKPTLLLVDGSSYLYRAYHAMAQLSAPDGAPTGALYGVLNMLRRLRADYVHDYCAVVFD AKGKNFRHEMFPDYKATRPPMPDDLRPQAEALPDLVRLMGWPVLVIPQVEADDVIGTLAA MAGEAGWNVVVSTGDKDMAQLVNERVTLVNTMSGETLDIEGVKAKFGVRPDQIRDYLALM GDKVDNVPGVEKCGPKTAVKWLEAYGSLAGVMEHAAEIKGKVGENLQAALPQLPLSYDLV TIKTDVDLHAELSDGLESLRRTSPKWSQLAVDFKRWGFRTWLKEAESRMHEAAEGDLFGS DTIGEQAALGLPENGGTSSEKIIEHAPAPEKLDYQAVTTEAQFAALLDRLSQADTIGIDT ETTSLDAMNASLVGISIAFQAGEAVYIPVGHSLTAAPEQLDLQDVLGRLKPHLENPVLKK IGQNLKYDQHVFANYGIALNGIAGDAMLASYIIESHLGHGLDELSERWLGLETITYESLC GKGAKQIGFADVAIEQATEYAAQDADFALRLEAHLRAQMDAKQLEMYEKMELPVAQVLFE MERNGVQIDRAELARQSAELGAELMKLEQEAYAAAGQLFNLNSPKQLQEILFDKMGIPTK GLKKTAKGGISTNEAVLEQLAPDYPLPKIILQNRSLAKLKSTYTDKLPEMISPKDGRVHT TYAQAVAITGRLASNNPNLQNIPIRTAEGRRVRRAFTAPQGSVIVSADYSQIELRIMAHL SGDKTLIAAFQNGEDVHCRTAAEVFGIAPENVSSEQRRYAKTINFGLIYGMGQYGLAKSL GIDNLSAKTFIDRYFARYPGVAEYMQRTKEQAAAQGFVETLFGRRLYLPDIRNKNANARA GAERAAINAPMQGTASDLIKRAMIDVSRWLSDDLLQSKLIMQVHDELVLEVPESELDLVK TNLPELMADVGKGLLNVPLVAEVGVGENWEEAH >gi|257257242|gb|ACDX02000008.1| GENE 112 100504 - 101379 310 291 aa, chain + ## HITS:1 COG:no KEGG:PSHAa2349 NR:ns ## KEGG: PSHAa2349 # Name: not_defined # Def: hypothetical protein # Organism: P.haloplanktis # Pathway: not_defined # 22 248 145 378 443 66 23.0 1e-09 MDSYINRKQIFDEKFDAYLSILNEYIQQWGAIDPTGQTFRYPLDTESKRHLQDISNIQIL FLFSNAEKNHKKLDDFYHFIQNLHDDYKKNRGNQFLTYFQLTKLAESLPVFHQWGEALTQ ELLDELQIKFKLVSRRQIYKCIDYIKQDYYLSSLISKDIAFKFLSNDKVKDIIDFFKQFQ IKEGSILGDNKSERNLSLNTIDWEAWQQERERIQDFFSDYTYNELVDLVTIIYIGRDENT PQEYDLIYRYMEGIFETPDSIINKIQEKQCNIVCYLNNSLDIFGKSFLRTN >gi|257257242|gb|ACDX02000008.1| GENE 113 101711 - 103084 1878 457 aa, chain + ## HITS:1 COG:NMB2064 KEGG:ns NR:ns ## COG: NMB2064 COG2056 # Protein_GI_number: 15677886 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Neisseria meningitidis MC58 # 1 457 1 462 462 633 82.0 0 MNAVVIAVIVMLVLSLSRVHVVLSLTVGAFVGGLVAGMPLENVVDTAGNVTQSGIIPVFN EGLKGGARISLSYAMLGAFAMAITYSGLPQQLAGGIIRKLNGSQDAAKGESSVKWTLLLI ILAMGIMSQNVVPIHIAFIPMIIPPLLLVFNRLKVDRRLVACVITFGLVTTYMFLPYGFG AIFLNDILLGNIKSAGMDVKGISVMHAMAIPALGMVTGLLAAFVHYRKSRIYQTNTVDTE DNREASEQPQPSAYRSLVAAVAIGVCFAIQLMYEDSLVLGAMLGFAVFMMLGVMNRDAAS DVFGEGIKMMAMVGFIMIAAQGFAAVMTATGEIKPLVEHSMQLFGGNKGMAAFAMLFVGL LVTMGIGSSFSTLPIITAIYVPLCISLGFSPLATVAIVGTAGALGDAGSPASDSTLGPTM GLNADGQHDHIRDSVIPTFIHYNIPLMIAGWIAAMVL >gi|257257242|gb|ACDX02000008.1| GENE 114 103085 - 103312 356 75 aa, chain + ## HITS:1 COG:NMA0371 KEGG:ns NR:ns ## COG: NMA0371 COG2900 # Protein_GI_number: 15793379 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 75 1 74 74 81 72.0 3e-16 MSEMDELEHRITELEIQTALQEDLIGSLNDTVAKMQQTLDLQQAQLRLLYQKMQDKGANG EREPYSLRDEIPPHY >gi|257257242|gb|ACDX02000008.1| GENE 115 103380 - 103706 446 108 aa, chain - ## HITS:1 COG:NMB1884 KEGG:ns NR:ns ## COG: NMB1884 COG0607 # Protein_GI_number: 15677719 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Neisseria meningitidis MC58 # 1 108 1 107 107 177 78.0 3e-45 MTIPQLTPLQLQQWRQEGRAFHLLDVRTDEETAVCALPDAIHIPMNLIPLRQNELPDDDL PIVVYCHHGIRSLHTAMYLADAGFENLFNLQGGIDAWALQVDGTMARY >gi|257257242|gb|ACDX02000008.1| GENE 116 103806 - 104462 970 218 aa, chain - ## HITS:1 COG:NMA0572 KEGG:ns NR:ns ## COG: NMA0572 COG2518 # Protein_GI_number: 15793563 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Protein-L-isoaspartate carboxylmethyltransferase # Organism: Neisseria meningitidis Z2491 # 1 218 1 218 218 373 92.0 1e-103 MDFEKARFNMVEQQIRPWDVLDFDVLDALEEIPRERFVNESLQGLAYADMELPLANGHKM LEPKVVARLAQGLKLTKTDTVLEIGTGSGYATALLAKLAGKVVSDDLDAEQQNRAKAVLD GLALNNIDYVQNNGLTEPSAGAPFDAVYVGGAVDRVPEVLKEQLKDGGRMAVIVGRQPVQ RALLITRKGDQFEEKVLFDTLVAHLDDKENRPFGDFDF >gi|257257242|gb|ACDX02000008.1| GENE 117 104566 - 105069 290 167 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15902812|ref|NP_358362.1| hypothetical protein spr0768 [Streptococcus pneumoniae R6] # 9 156 4 150 165 116 40 5e-25 MHALHFSASDKAALYREVLPQIESVVADETDWMANLANTAAVLKEAFGWFWVGFYLVDTR TDELVLAPFQGPLACTRIPFGRGVCGQAWAKGETLVVKDVNAHPDHIACSSLSRSEIVVP LFSDDLCIGVLDVDSEHLAQFDETDALYLGELAKILEKRFKASRQAA >gi|257257242|gb|ACDX02000008.1| GENE 118 105276 - 106049 1040 257 aa, chain + ## HITS:1 COG:NMB1887 KEGG:ns NR:ns ## COG: NMB1887 COG0149 # Protein_GI_number: 15677722 # Func_class: G Carbohydrate transport and metabolism # Function: Triosephosphate isomerase # Organism: Neisseria meningitidis MC58 # 1 255 1 255 257 502 97.0 1e-142 MHHQIGMWDQKWVIGNWKMNGRLQNNNALMHRFRIMPTAERVLIGLAAPTVYLLQLHNAM QIVLNNRILTCAQDVSRFPNNGAYTGEVSAEMLADIGTDIVLIGHSERSLYFGEKNEIQR RKMENVLNVGLIPLLCVGESLEEREAGKEHEVIAHQLSVLQGLDTKNIAVAYEPVWAIGT GKVATVEQIADMHAFIYKEILSLCGSDVKIRVLYGGSVKADNAADIFAVPHVDGALVGGA SLSYDSFTAIINAAQAS >gi|257257242|gb|ACDX02000008.1| GENE 119 106057 - 106419 309 120 aa, chain + ## HITS:1 COG:NMA0569 KEGG:ns NR:ns ## COG: NMA0569 COG1314 # Protein_GI_number: 15793560 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecG # Organism: Neisseria meningitidis Z2491 # 1 120 1 116 116 181 86.0 3e-46 MEAFKTLIWIINIISALSVVVLVLLQHGKGADAGATFGSGSGSAQGVFGSAGNANFLSRA TAIAATFFFATCMAMVYIHTHTNKHGLDFSNVQQTQQAPKPATPAENQLAPAAPAPQQQK >gi|257257242|gb|ACDX02000008.1| GENE 120 106739 - 107143 340 134 aa, chain + ## HITS:1 COG:RSc1871 KEGG:ns NR:ns ## COG: RSc1871 COG0582 # Protein_GI_number: 17546590 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Ralstonia solanacearum # 1 126 1 124 405 115 49.0 2e-26 MPLNDRQIKNAKPAETGKKTKLFDGGGLYLEITPAGGKVFRLKYRIDGKEKTFTIGKYPT ISLVEARQAAENARRLLVSGQDPSEAKQQEKRERQAAALNTFESIARRWHTDNLHRWKEN HAARIIFDSEKVLP >gi|257257242|gb|ACDX02000008.1| GENE 121 107219 - 107842 547 207 aa, chain - ## HITS:1 COG:NMB2018 KEGG:ns NR:ns ## COG: NMB2018 COG0564 # Protein_GI_number: 15677843 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthases, 23S RNA-specific # Organism: Neisseria meningitidis MC58 # 1 199 3 201 220 294 71.0 1e-79 MWEILFRHPDFVAINKPCGVSVHQEEGEVSLTQTLAAQLGLEQIWLLHRLDKLTSGVLLF ALNPQSASALAQQFAAKTMRKTYLALSTDKPSKKQGWIKGDMEKSRRGAWKLMRSTENPA VTEFNCQSLEPGLRLFVLHPHTGKTHQLRVAMKSLGSPILGDTLYGGKAASRMFLHAWKI KFDYQDQTFEIVAPLSEEWPPLDFIHE >gi|257257242|gb|ACDX02000008.1| GENE 122 107853 - 108425 718 190 aa, chain - ## HITS:1 COG:CC2370 KEGG:ns NR:ns ## COG: CC2370 COG2119 # Protein_GI_number: 16126609 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Caulobacter vibrioides # 1 190 17 207 207 153 48.0 2e-37 MEAFFSSMLGVAIAEIGDKTQLLALFLAARFAQKNAVVSGIFIATLLNHLVSAFVGVWLA EAISPETVKWVVGISFIAVGLWLLLPDKDENPDSRWLKYGAFGATVFLFFMAEIGDKTQI ATVLLAAKYQSLSMVVLGSVAGLMLATVPVVYLGDMLMKKIPAKAVRISACVLFCVLGVI TLSGGGIMLK >gi|257257242|gb|ACDX02000008.1| GENE 123 108757 - 109344 216 195 aa, chain + ## HITS:1 COG:TM1674 KEGG:ns NR:ns ## COG: TM1674 COG1434 # Protein_GI_number: 15644422 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Thermotoga maritima # 37 160 68 193 237 78 36.0 8e-15 MQKYWILCIVCLLVWCAVLSWLHLCAVNVEKRSSENLSSADIAVVLGNAVSRRGKPNPCL RSRVEAGVRLYRQGKVGELLMSGGTDGDGSNEAQTMRDMAVEMGVPSEKIRLEEHSESTY ENIVLSVPKLRDANEIIIVSDAFHLARASWLAKRYWQGKTVELYASGACGDSTLNYLRKL SREVLAWVKAVALYS >gi|257257242|gb|ACDX02000008.1| GENE 124 109595 - 109945 392 116 aa, chain + ## HITS:1 COG:no KEGG:NLA_8450 NR:ns ## KEGG: NLA_8450 # Name: not_defined # Def: transposase # Organism: N.lactamica # Pathway: not_defined # 1 116 106 221 221 208 96.0 5e-53 MSKYTLHFKYQAVLHYLHIRSQQRTADHYGISRTHLRRWIRAYQEGGIGALEHPQSKTMT DHRKNPFIADKPDHEKTQAELIEELCYMRAKVAYLKELKALSQKRTEKDKAKPSKH Prediction of potential genes in microbial genomes Time: Sat Jul 16 23:58:33 2011 Seq name: gi|257257240|gb|ACDX02000009.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont8.1, whole genome shotgun sequence Length of sequence - 97709 bp Number of predicted genes - 91, with homology - 88 Number of transcription units - 65, operones - 24 average op.length - 2.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 6/0.095 - CDS 3 - 450 240 ## COG3335 Transposase and inactivated derivatives 2 1 Op 2 . - CDS 486 - 836 294 ## PROTEIN SUPPORTED gi|148984739|ref|ZP_01818007.1| IS630-Spn1, transposase Orf1 - Prom 868 - 927 6.3 + Prom 832 - 891 6.3 3 2 Tu 1 . + CDS 1034 - 2047 213 ## PROTEIN SUPPORTED gi|157165511|ref|YP_001467745.1| 30S ribosomal protein S15 + Term 2125 - 2175 12.1 - Term 2118 - 2159 10.6 4 3 Tu 1 . - CDS 2181 - 3308 1530 ## COG5008 Tfp pilus assembly protein, ATPase PilU - Prom 3340 - 3399 6.8 + Prom 3413 - 3472 5.9 5 4 Tu 1 . + CDS 3496 - 4197 824 ## COG0775 Nucleoside phosphorylase + Term 4267 - 4315 9.3 + Prom 4260 - 4319 3.8 6 5 Op 1 14/0.095 + CDS 4339 - 6132 2510 ## COG0481 Membrane GTPase LepA 7 5 Op 2 . + CDS 6132 - 7151 1353 ## COG0681 Signal peptidase I + Term 7176 - 7226 14.3 + Prom 7355 - 7414 3.0 8 6 Tu 1 . + CDS 7464 - 8348 797 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily + Term 8364 - 8412 14.2 - Term 8356 - 8396 6.1 9 7 Tu 1 . - CDS 8399 - 8608 181 ## - Prom 8755 - 8814 2.2 + Prom 8456 - 8515 6.3 10 8 Tu 1 . + CDS 8671 - 9648 1237 ## COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components + Term 9679 - 9716 3.1 + Prom 9826 - 9885 5.0 11 9 Tu 1 . + CDS 9957 - 10451 329 ## gi|261364911|ref|ZP_05977794.1| hypothetical protein NEIMUCOT_05197 + Term 10460 - 10491 2.7 + Prom 10497 - 10556 4.2 12 10 Tu 1 . + CDS 10684 - 11337 54 ## gi|288575881|ref|ZP_06394030.1| hypothetical protein NEIMUCOT_05198 13 11 Op 1 7/0.095 + CDS 11499 - 12296 787 ## COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 14 11 Op 2 . + CDS 12296 - 12988 178 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 13184 - 13212 -0.1 + Prom 13042 - 13101 2.2 15 12 Op 1 . + CDS 13287 - 13922 426 ## COG4300 Predicted permease, cadmium resistance protein 16 12 Op 2 . + CDS 13923 - 14174 61 ## gi|288575886|ref|ZP_06394033.1| conserved hypothetical protein 17 12 Op 3 . + CDS 14241 - 15314 1454 ## COG3213 Uncharacterized protein involved in response to NO + Term 15372 - 15423 13.0 - Term 15360 - 15410 12.5 18 13 Tu 1 . - CDS 15428 - 15865 793 ## COG1607 Acyl-CoA hydrolase - Term 15921 - 15966 5.5 19 14 Op 1 . - CDS 15970 - 16743 1006 ## COG1496 Uncharacterized conserved protein 20 14 Op 2 . - CDS 16785 - 17357 238 ## PputGB1_3403 hypothetical protein - Term 17395 - 17447 19.2 21 15 Tu 1 . - CDS 17453 - 18577 1573 ## COG0564 Pseudouridylate synthases, 23S RNA-specific - Prom 18720 - 18779 3.6 + Prom 18327 - 18386 5.5 22 16 Tu 1 . + CDS 18576 - 19382 1364 ## COG4105 DNA uptake lipoprotein + Term 19428 - 19500 20.3 - Term 19428 - 19476 14.0 23 17 Tu 1 . - CDS 19495 - 21021 2430 ## COG1171 Threonine dehydratase - Prom 21099 - 21158 3.6 + Prom 21119 - 21178 3.9 24 18 Op 1 . + CDS 21237 - 22490 1556 ## COG1686 D-alanyl-D-alanine carboxypeptidase + Term 22507 - 22547 10.8 25 18 Op 2 . + CDS 22576 - 23238 904 ## COG3318 Predicted metal-binding protein related to the C-terminal domain of SecA + Term 23265 - 23306 10.6 - Term 23247 - 23299 18.0 26 19 Op 1 . - CDS 23311 - 23850 686 ## COG2839 Uncharacterized protein conserved in bacteria - Prom 23920 - 23979 4.6 - Term 23969 - 23999 1.1 27 19 Op 2 . - CDS 24008 - 24967 1378 ## COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control - Prom 25002 - 25061 7.2 28 20 Op 1 15/0.000 - CDS 25113 - 27278 2814 ## COG2217 Cation transport ATPase 29 20 Op 2 . - CDS 27378 - 27587 428 ## COG2608 Copper chaperone - Prom 27692 - 27751 1.8 + Prom 27557 - 27616 3.2 30 21 Op 1 . + CDS 27735 - 28127 461 ## COG0789 Predicted transcriptional regulators 31 21 Op 2 . + CDS 28165 - 28512 304 ## COG3039 Transposase and inactivated derivatives, IS5 family + Prom 28831 - 28890 5.8 32 22 Tu 1 . + CDS 28915 - 29700 747 ## COG3384 Uncharacterized conserved protein + Term 29946 - 29988 -0.8 - Term 29990 - 30038 9.3 33 23 Op 1 . - CDS 30061 - 30996 1076 ## COG0167 Dihydroorotate dehydrogenase - Prom 31029 - 31088 2.3 - Term 31205 - 31233 0.7 34 23 Op 2 . - CDS 31249 - 32430 1489 ## COG4992 Ornithine/acetylornithine aminotransferase - Prom 32543 - 32602 5.5 35 24 Op 1 . + CDS 32474 - 32914 473 ## NLA_13560 hypothetical protein 36 24 Op 2 . + CDS 32923 - 33225 190 ## gi|261364935|ref|ZP_05977818.1| conserved hypothetical protein + Term 33432 - 33462 1.2 - Term 33420 - 33450 1.2 37 25 Tu 1 . - CDS 33486 - 34286 1158 ## COG0688 Phosphatidylserine decarboxylase - Prom 34472 - 34531 4.8 + Prom 34417 - 34476 5.0 38 26 Op 1 . + CDS 34506 - 37385 4023 ## COG0178 Excinuclease ATPase subunit 39 26 Op 2 . + CDS 37407 - 38594 391 ## Spro_0111 hypothetical protein 40 26 Op 3 . + CDS 38600 - 39361 150 ## FIC_01025 hypothetical protein + Term 39460 - 39497 4.3 41 27 Tu 1 . - CDS 39265 - 39516 59 ## NMO_0858 hypothetical protein - Prom 39561 - 39620 2.2 + Prom 39464 - 39523 1.8 42 28 Tu 1 . + CDS 39623 - 39835 157 ## NMO_0029 hypothetical protein + Term 40033 - 40074 1.1 - Term 40118 - 40163 11.4 43 29 Tu 1 . - CDS 40182 - 40550 462 ## gi|261364942|ref|ZP_05977825.1| putative late embryogeneis abundant protein - Prom 40662 - 40721 8.3 + Prom 40734 - 40793 6.5 44 30 Tu 1 . + CDS 40831 - 41043 59 ## + Prom 41048 - 41107 8.2 45 31 Op 1 . + CDS 41172 - 41708 479 ## DNO_0911 anaerobic ribonucleoside-triphosphate reductase activating protein (EC:1.97.1.4) 46 31 Op 2 . + CDS 41743 - 43524 2667 ## COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase + Term 43539 - 43597 17.0 - Term 43622 - 43671 12.1 47 32 Op 1 . - CDS 43686 - 44015 491 ## NGK_0946 putative secreted protein 48 32 Op 2 . - CDS 44058 - 44309 226 ## gi|261364946|ref|ZP_05977829.1| conserved hypothetical protein - Prom 44352 - 44411 7.6 - Term 44621 - 44659 5.0 49 33 Tu 1 . - CDS 44727 - 45599 1360 ## COG1741 Pirin-related protein - Prom 45689 - 45748 5.0 + Prom 45648 - 45707 5.0 50 34 Op 1 . + CDS 45762 - 46118 164 ## COG1733 Predicted transcriptional regulators + Prom 46153 - 46212 7.0 51 34 Op 2 . + CDS 46238 - 46729 366 ## NMC1253 hypothetical protein + Term 46774 - 46831 16.3 - Term 46762 - 46819 6.3 52 35 Tu 1 . - CDS 46842 - 47408 766 ## COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family - Prom 47446 - 47505 5.4 53 36 Tu 1 . - CDS 47557 - 48120 1002 ## COG2353 Uncharacterized conserved protein - Prom 48150 - 48209 4.4 - Term 48284 - 48326 -0.8 54 37 Tu 1 . - CDS 48388 - 50835 2903 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins - Prom 50919 - 50978 7.6 - Term 50947 - 50986 9.3 55 38 Tu 1 . - CDS 51006 - 52370 1770 ## COG0733 Na+-dependent transporters of the SNF family - Prom 52410 - 52469 6.2 - TRNA 52657 - 52733 84.5 # Pro CGG 0 0 + Prom 52880 - 52939 4.9 56 39 Tu 1 . + CDS 53003 - 53476 500 ## COG3030 Protein affecting phage T7 exclusion by the F plasmid + Term 53514 - 53566 15.3 - Term 53508 - 53547 9.3 57 40 Op 1 . - CDS 53567 - 54127 778 ## NMCC_1281 membrane lipoprotein 58 40 Op 2 . - CDS 54255 - 54755 467 ## NMCC_1282 hypothetical protein - Prom 54802 - 54861 2.5 - Term 55156 - 55209 13.2 59 41 Tu 1 . - CDS 55234 - 57144 2948 ## COG0366 Glycosidases - Prom 57324 - 57383 7.0 60 42 Tu 1 . - CDS 57591 - 58556 263 ## PROTEIN SUPPORTED gi|148987750|ref|ZP_01819213.1| ribose-phosphate pyrophosphokinase - Term 58566 - 58602 4.6 61 43 Tu 1 . - CDS 58680 - 60968 2785 ## COG1629 Outer membrane receptor proteins, mostly Fe transport - Prom 60996 - 61055 6.7 - Term 61215 - 61262 13.3 62 44 Tu 1 . - CDS 61281 - 61757 729 ## COG0662 Mannose-6-phosphate isomerase - Prom 61785 - 61844 2.4 + Prom 61792 - 61851 4.7 63 45 Tu 1 . + CDS 61917 - 62279 417 ## Mmcs_0699 hypothetical protein + Term 62289 - 62326 0.3 - Term 62258 - 62292 -0.3 64 46 Tu 1 . - CDS 62365 - 63774 2092 ## COG0260 Leucyl aminopeptidase - Prom 63850 - 63909 3.9 + Prom 63718 - 63777 3.4 65 47 Op 1 22/0.000 + CDS 63943 - 65058 1776 ## COG0795 Predicted permeases 66 47 Op 2 . + CDS 65055 - 66125 1675 ## COG0795 Predicted permeases + Term 66145 - 66208 7.5 - Term 66437 - 66476 8.0 67 48 Op 1 . - CDS 66505 - 67272 975 ## COG0710 3-dehydroquinate dehydratase 68 48 Op 2 . - CDS 67269 - 67967 700 ## CHU_1327 hypothetical protein - Prom 68120 - 68179 4.6 69 49 Tu 1 . + CDS 68334 - 69752 1886 ## COG0471 Di- and tricarboxylate transporters + Term 69770 - 69820 16.2 70 50 Tu 1 . + CDS 69860 - 70369 890 ## COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family + Term 70401 - 70431 3.4 - Term 70849 - 70889 4.1 71 51 Op 1 12/0.095 - CDS 70957 - 71784 610 ## COG0627 Predicted esterase 72 51 Op 2 . - CDS 71793 - 72929 733 ## COG1062 Zn-dependent alcohol dehydrogenases, class III - Prom 72967 - 73026 6.3 + Prom 72931 - 72990 7.9 73 52 Op 1 . + CDS 73149 - 73631 415 ## COG2931 RTX toxins and related Ca2+-binding proteins 74 52 Op 2 . + CDS 73616 - 73846 235 ## gi|288575919|ref|ZP_05977858.2| N6-adenine-specific methylase + Term 73968 - 74017 11.1 - Term 73952 - 74008 12.9 75 53 Op 1 . - CDS 74066 - 74563 685 ## COG1881 Phospholipid-binding protein 76 53 Op 2 . - CDS 74670 - 75329 895 ## COG0692 Uracil DNA glycosylase - Prom 75350 - 75409 2.7 - Term 75374 - 75423 9.1 77 54 Tu 1 . - CDS 75432 - 77234 2328 ## COG4232 Thiol:disulfide interchange protein - Prom 77261 - 77320 5.4 78 55 Op 1 8/0.095 - CDS 77507 - 78163 1047 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 79 55 Op 2 . - CDS 78160 - 79953 1774 ## COG3850 Signal transduction histidine kinase, nitrate/nitrite-specific - Prom 80071 - 80130 6.0 + Prom 80046 - 80105 5.7 80 56 Tu 1 . + CDS 80196 - 80756 295 ## COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A + Term 80826 - 80862 8.2 - Term 80814 - 80850 8.2 81 57 Tu 1 . - CDS 80884 - 83394 1135 ## PROTEIN SUPPORTED gi|15894003|ref|NP_347352.1| fused ribonuclease/ribosomal protein S1 - Prom 83501 - 83560 80.3 + TRNA 83473 - 83559 71.6 # Leu CAG 0 0 + TRNA 83601 - 83687 70.5 # Leu CAG 0 0 + TRNA 83783 - 83873 68.8 # Ser GGA 0 0 - Term 84326 - 84366 9.1 82 58 Tu 1 . - CDS 84383 - 85702 2048 ## COG1960 Acyl-CoA dehydrogenases - Prom 85857 - 85916 5.0 + Prom 85812 - 85871 3.2 83 59 Tu 1 . + CDS 85999 - 86691 1120 ## COG1814 Uncharacterized membrane protein - Term 86830 - 86879 12.3 84 60 Tu 1 . - CDS 86943 - 91253 5114 ## COG0296 1,4-alpha-glucan branching enzyme - Prom 91282 - 91341 4.6 - Term 91473 - 91526 17.2 85 61 Tu 1 . - CDS 91550 - 92029 661 ## COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 - Prom 92173 - 92232 7.2 + Prom 92521 - 92580 3.6 86 62 Tu 1 . + CDS 92602 - 92880 509 ## + Term 92893 - 92941 15.3 + Prom 92924 - 92983 6.2 87 63 Tu 1 . + CDS 93016 - 94383 1780 ## COG0277 FAD/FMN-containing dehydrogenases + Term 94415 - 94462 8.5 + Prom 94431 - 94490 7.8 88 64 Op 1 . + CDS 94523 - 95509 1414 ## COG0039 Malate/lactate dehydrogenases 89 64 Op 2 . + CDS 95576 - 96748 1572 ## COG1432 Uncharacterized conserved protein + Prom 96766 - 96825 5.4 90 65 Op 1 6/0.095 + CDS 96857 - 97207 294 ## PROTEIN SUPPORTED gi|148984739|ref|ZP_01818007.1| IS630-Spn1, transposase Orf1 91 65 Op 2 . + CDS 97243 - 97701 304 ## COG3335 Transposase and inactivated derivatives Predicted protein(s) >gi|257257240|gb|ACDX02000009.1| GENE 1 3 - 450 240 149 aa, chain - ## HITS:1 COG:SP0016 KEGG:ns NR:ns ## COG: SP0016 COG3335 # Protein_GI_number: 15899965 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 42 147 1 106 112 136 58.0 1e-32 MPKVYLDETGFDTFYYRPYAYALRGQIVKARISGKRYERMSLVAACGDRELVAPMIYKGT MDSSLFEAWFGQFLLKELKEPSVIIMDNARFHRMAVLREMAQRAGHIILPLPPYSPELNP IEKVWANIKRHLRKVMSGCLSFEQALLGI >gi|257257240|gb|ACDX02000009.1| GENE 2 486 - 836 294 116 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148984739|ref|ZP_01818007.1| IS630-Spn1, transposase Orf1 [Streptococcus pneumoniae SP3-BS71] # 1 116 1 116 116 117 44 2e-25 MAYSIDFRQKALDHYEQHGNISQTARTFRITNRTLYQWIALKKETGSLQHRTKGGNSERI DKEELRRYVAEHPDAYQYEIAQHLGCTASNVGYLLKTLKITRKKRQPSTKNKTSKK >gi|257257240|gb|ACDX02000009.1| GENE 3 1034 - 2047 213 337 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157165511|ref|YP_001467745.1| 30S ribosomal protein S15 [Campylobacter concisus 13826] # 36 312 44 322 406 86 25 4e-16 MKLNDRQIKNAKPAEKPFKLNDGKGLYLYINTSGGKLWRFDFSHNGKRKTLSIGKYPTVS LVEARQAAENARRLLASGQDPSEAKQQEKRERQAAVSNTFRNIAAEWHKHRETGLTGNHA ARVWDSLEKDVFPALGSLPVSEIKVSQVKEVIEAVAARGALETVGRILQRIKAVFTYAIR TERAENNPAVPLVGLIKAPKQKHQPALPQSELAEFYRRLMLEQAEQQTKIAMQLIMLTFV RNGELRAAEWAEFDLDGAEWSIPAAKMKMKAPHIVPLADWTLELLAEMKELTGHSRYLFP SVKDPDKHMSENNATISYTIPTGQCRKYHYNSVGWIN >gi|257257240|gb|ACDX02000009.1| GENE 4 2181 - 3308 1530 375 aa, chain - ## HITS:1 COG:NMA0979 KEGG:ns NR:ns ## COG: NMA0979 COG5008 # Protein_GI_number: 15793936 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, ATPase PilU # Organism: Neisseria meningitidis Z2491 # 7 375 2 370 370 644 84.0 0 MMTNPPSAKDELFTWLRHMNKYKGSDLFITTNFPPAMKVDGKITPITDEPLTSEKCMEIA FSIMSTKQIEEFSSTNECNFAISLPDTSRFRVNAMVQRGATALVFRSITSKIPNFDSLNL PPVLKDVVMKKRGLVIFVGGTGSGKSTSLAAMVDHRNENCQDHIITIEDPIEFVHQHKKS IITQREVGVDTENWFAALKNTLRQAPDVILIGEIRDRETMDYALAFAETGHLCLATLHAN NSNQALDRIINFFPEERRTQLLTDLSLNLQAFISQRLIPREGGKGRVAAVEILLNSPIIS EMIQKGEIHGIKEMMKKSTAMGMQTFDQALYELYERGDISFQDAIKNADSAHDLRLDIQL RSRRAQNAGPDLELI >gi|257257240|gb|ACDX02000009.1| GENE 5 3496 - 4197 824 233 aa, chain + ## HITS:1 COG:NMA0978 KEGG:ns NR:ns ## COG: NMA0978 COG0775 # Protein_GI_number: 15793935 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside phosphorylase # Organism: Neisseria meningitidis Z2491 # 1 233 1 233 233 342 88.0 4e-94 MSVQTVAVIGAMEQEIELLRAAMDHVKSVSFGKFTAYEGEMAGKHMVLVLSGIGKVNAAV STAWVIHQFAPDCVINTGSAGGLGKGLKVGDVVVGTEIAHHDVDVTAFGYVWGQVPQLPA VFVSDDLLVGKAKQAAEVFEGAAVEQGLIVSGDRFVHSSEGVAEIRSHFPEVKAVEMEAA AIAQACYQLNTPFVVIRAMSDSADEKADISFEEFLKTAAASSAKMVEKIVVSL >gi|257257240|gb|ACDX02000009.1| GENE 6 4339 - 6132 2510 597 aa, chain + ## HITS:1 COG:NMB0766 KEGG:ns NR:ns ## COG: NMB0766 COG0481 # Protein_GI_number: 15676664 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane GTPase LepA # Organism: Neisseria meningitidis MC58 # 1 597 1 597 597 1156 99.0 0 MKNIRNFSIIAHIDHGKSTLADRFIQYCGGLDLREMSTQVLDSMDIEKERGITIKAQTAA LNYKARDGQVYQLNLIDTPGHVDFSYEVSRSLSACEGALLVVDASQGVEAQTVANCYTAI DLGVEVVPVLNKIDLPAADPDRVEQEIEDIIGIDAVGAVQCSAKSGIGVEDVLEEIVAKI PAPTGDENAPLQAVIVDSWFDNYVGVVMLIRVKNGTIKLKDKVRFMSTKAETQVEQLGVF TPKSVQKQELKAGEVGFLITGVKELGQAKVGDTVTLVANPASEPLPGFQEVQSQVFAGLY PVESHDYEALRDALEKLQLNDASLKFEPEVSQALGFGFRCGFLGLLHLEIVQERLEREFD MDLITTAPTVVYEVVLKSGEKIEVENPSKLPDIGSIETILEPIITATILVPQEYVGNVMT LCNQKRGVQVNMQYMGRQVMLTYDLPMNEVVMDFFDKLKSTSRGYASLDYHFKEFQPSDL IKLDIMVNGEKVDALSLIVHRQSAVHRGRELAAKMRELIPRQMFDIAVQAAIGSQIIARE NVKALRKNVLAKCYGGDITRKKKLLEKQKAGKRRMKQVGNVEIPQSAFLAILQVSDK >gi|257257240|gb|ACDX02000009.1| GENE 7 6132 - 7151 1353 339 aa, chain + ## HITS:1 COG:NMB0765 KEGG:ns NR:ns ## COG: NMB0765 COG0681 # Protein_GI_number: 15676663 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal peptidase I # Organism: Neisseria meningitidis MC58 # 20 338 20 338 339 494 70.0 1e-140 MSTNLIYGAIAAIVIGIFLYFISSKERQENGEWSSGLQWAYLLCMIGVFGILSFYMSFTA VLLIFVVFTGIVWAIHKGRLKKDPSHQDKAHFTDYMSGFFPIILVVFILRTFIAEPFQIP SSSMRPGLVKGDFILVNKFAYGIRTPIINNVLIPTGQIERGDVVVFNYPVQPEMNYIKRI VGLPGDTVEYRDKVLTVNGQVAPDQPNGTYSYPDDTEPSAIHSPELFQTTLNGKSFNILK EPGQPTISIPALDKYRMEIMPENGYSVEQSGLEHCQYAEDGSGFTCKVPEGRYFAMGDNR DNSADSRYWGFVDDKLIVGKAFFVWMNFGDYSRIGSSIH >gi|257257240|gb|ACDX02000009.1| GENE 8 7464 - 8348 797 294 aa, chain + ## HITS:1 COG:NMB0764 KEGG:ns NR:ns ## COG: NMB0764 COG0697 # Protein_GI_number: 15676662 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Neisseria meningitidis MC58 # 8 294 15 301 301 357 72.0 1e-98 MNIRSDSYAAPFLIFGCVLFGLGSLIVRFVPVGPYAVAFWRLLIAAGVFWLLCRFFGQKL PKSRRAVKYAMLSGIFLAFDLSLWHESVYAVGPGISTLLNSLQIFFLSAIGFFFFQERLN SLQVVSLILAVGGVVLIGSPEFNHNAHALWGFASGIASGGLLALSMVFVRKTHEVERVAL FPMMMVLSFGGALSLIVPALIFDSNALYPTQWRDIGLVLIYGVVMQCLAWGMIAYAIPLL SLSLTGLLLLSEPVAALLIDYFWLDKPINTLQWFGVVLTLSAIYLGSLKPKNTN >gi|257257240|gb|ACDX02000009.1| GENE 9 8399 - 8608 181 69 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDLNCAKHRNGHTTAYLDPQLCFTIHILIIIFIHYAIKENGSKGTIVPTSVYIWKRKSFS ALRLLIILK >gi|257257240|gb|ACDX02000009.1| GENE 10 8671 - 9648 1237 325 aa, chain + ## HITS:1 COG:AGl928 KEGG:ns NR:ns ## COG: AGl928 COG0715 # Protein_GI_number: 15890581 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 4 324 6 326 327 160 33.0 4e-39 MELKRRDFLKMTAALAAVGVSPSLLAAGKEQFTVYGAPAMPSVTIAVAALQGKLAKQADV SLKIWRSPDQLRAGVASGQFKVMMSPSNVGVNLRNQGQKVGMVNILTNGITQLVCKGSAI ASPQDLVGKKILVPFKNDMPDIVLQALLKKLKIDAHKVGITYTATPPEAVGLFLSKDYHA AILPEPMASAGMLKGKTMGVNVVRGFDLVKAWGQAFDTKPLIPMAGIIANEEYFHAHKAQ FDIFHQDLKNALNWILANRQSAAKIGKNYLPAPEPALVMGLDGARLTVTKGSEVKNEILK FYEILMQFNPKLLGGKLPDNGFFLA >gi|257257240|gb|ACDX02000009.1| GENE 11 9957 - 10451 329 164 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261364911|ref|ZP_05977794.1| ## NR: gi|261364911|ref|ZP_05977794.1| hypothetical protein NEIMUCOT_05197 [Neisseria mucosa ATCC 25996] hypothetical protein NEIMUCOT_05197 [Neisseria mucosa ATCC 25996] # 1 164 1 164 164 303 100.0 2e-81 MTFEFKNIGCIASNKITEFILKNERAYNLRYINDNEPIVFDEKSKIYECYLNEVLVAFII LEVWDYGDGYEIIFGTLTDDTNVHFTEILRQFLQNEYKEDLKIFALVQHDNPDKQTVFKI LEKNEFIQSTYKQTKVYKDLRANGIRKDEPDEFVYTPANNCEPT >gi|257257240|gb|ACDX02000009.1| GENE 12 10684 - 11337 54 217 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|288575881|ref|ZP_06394030.1| ## NR: gi|288575881|ref|ZP_06394030.1| hypothetical protein NEIMUCOT_05198 [Neisseria mucosa ATCC 25996] hypothetical protein NEIMUCOT_05198 [Neisseria mucosa ATCC 25996] # 1 217 3 219 219 434 100.0 1e-120 MFIKKFLFTCFIAIAFAGANACTRNINEGCEKTIQFTMDDNITVSNVIHWEIMPGKYVLN FRHYQASDSEGAVHRLTEDQLINAIKYSIAQIDKNKLYEIQLNWSSSETSRKSVEKALKE NTLLGGRYSAFDKKIQKITTKSFVQSPFIQKLCMQIDNLKVSCNFKSYFLEPILFKTGEY SSGKTIRSDENANIDWIGLASYELWFGIPINQREPQS >gi|257257240|gb|ACDX02000009.1| GENE 13 11499 - 12296 787 265 aa, chain + ## HITS:1 COG:AGl927 KEGG:ns NR:ns ## COG: AGl927 COG0600 # Protein_GI_number: 15890580 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 20 264 14 259 269 134 34.0 1e-31 MIKTDKIRKPQPAVFYIIDYLWSGFAGLSVAMAVVALWAWGSAVFGEFMLPAPVEVFQKS LDLLQHFQENEIGISLWRSVLGISVALAAGLAAGLVAGSFKTAMALLKPVITVLLAMPPI IWVVMALFWFGFGNPSVLFTIIVLVAPLTFASAAVGMASVNKQHEELFDAYKLGRLKKIR YLYIPHLTGYVISSIGVAVAMGVKVVIMAELLGASEGVGARIADARAMLETSTVMAYVVL VIVFVSLFEYLITKPLEILFMPWRR >gi|257257240|gb|ACDX02000009.1| GENE 14 12296 - 12988 178 230 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 191 1 213 245 73 27 5e-12 MLCLENVRFEILRDPIVRDFSLNLQHGEVKALFGPSGCGKTTVLRLIAGLETPKSGSIRN TFRKTGFLFQENRLPENLTAMQNIAIFMDKPDEGEIIALAAKVGLTAGDLNKYPTELSGG MAKRVAFLRLLLCGCDLALLDEPFVGLDRDLRDILVAMLVEKIERQGMACMLVTHDRFEA ARLSHEIMLLSTKGMNVQNVITLPTPLSERDSAFEEAVVAREFQGIHYYE >gi|257257240|gb|ACDX02000009.1| GENE 15 13287 - 13922 426 211 aa, chain + ## HITS:1 COG:SAP005 KEGG:ns NR:ns ## COG: SAP005 COG4300 # Protein_GI_number: 16119205 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted permease, cadmium resistance protein # Organism: Staphylococcus aureus N315 # 5 208 1 204 205 278 85.0 7e-75 MRCFMFSTVITAAVLYIATAVDLLVILLVFFARANTRKEYRDIYIGQYLGSVILILVSLF LAFVLNYVPEKWVLGLLGLIPIYLGIKVAIYDDCEGEKRAKKELDEKGLSKLVGIVALVT VASCGADNIGLFVPYFVTLDLVDLLVTLLVFLILIFVLVYTAQRLANISGVGEIVEKFSR WIMAVIYIGLGLFIIIENHTIQTIISIISII >gi|257257240|gb|ACDX02000009.1| GENE 16 13923 - 14174 61 83 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|288575886|ref|ZP_06394033.1| ## NR: gi|288575886|ref|ZP_06394033.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 83 1 83 83 139 100.0 9e-32 MIRAFEYLTNLAVRCPLLSPLPRERDKVAENQRAVELGIRWQVNLKMFRLDSPIPSPRGR RLGRGQASRRLASLAKDTALSAQ >gi|257257240|gb|ACDX02000009.1| GENE 17 14241 - 15314 1454 357 aa, chain + ## HITS:1 COG:NMA0732 KEGG:ns NR:ns ## COG: NMA0732 COG3213 # Protein_GI_number: 15793708 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in response to NO # Organism: Neisseria meningitidis Z2491 # 1 357 1 357 357 556 93.0 1e-158 MRPFFVGAAVLAILGALVFFISPAAIVLHRQIFLELMLPAAYGGFLTAAMLEWTGYKGRL KPVATVLAALLLAASVLLPFSPQTASFFVAAYWLVLLLFCTWLIWLDRNTDNFALLMLLA AFTVFQTAYAVSGDLNLLRAQVHLNMAAVMFVSVRVSVLLGAEALKECRLKDPVFIPNVV YKNIAITFLLLHTAAELWLPTQTAGFTAFAVGFILLAKLRELHHHELLRKHYVRTYYLLQ LFAAAGYLWTGVARLQNLPASAPLHLITLGGMMGGVMMVWLTAGLWHSGFTKLDYPKLCR IAVPILFAAAVSRAVLMNVNPIFFITVPEILTAAVFVLYLLTFVPIFRANAFTDDPE >gi|257257240|gb|ACDX02000009.1| GENE 18 15428 - 15865 793 145 aa, chain - ## HITS:1 COG:NMB0925 KEGG:ns NR:ns ## COG: NMB0925 COG1607 # Protein_GI_number: 15676820 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA hydrolase # Organism: Neisseria meningitidis MC58 # 1 145 1 145 148 257 86.0 5e-69 MTQKNEHRSHPQGELLLRTVAMPQDTNPNQDIFGGWIMSQMDLGGGILAAEIAQGRIVTV AVQEMNFIRPVKVGNVVCCYGRCVRVGNTSLQLKIEVWVKTLMNDHLTEDRQLVTEAVFT YVAIDSEGNTRPIPKEGNPKLQGLI >gi|257257240|gb|ACDX02000009.1| GENE 19 15970 - 16743 1006 257 aa, chain - ## HITS:1 COG:NMB0706 KEGG:ns NR:ns ## COG: NMB0706 COG1496 # Protein_GI_number: 15676604 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis MC58 # 1 255 1 255 259 430 86.0 1e-120 MKTITETLNLAPQGKNFLTADWPAPANVKTLITTRNGGVSQGVYQSLNLGSHVGDDPDAV RRNREIVQERVGLPVAYLNQIHSTIVVNAADALGNVPDADASVDNTGKAACAAMTADCLP VLFCDKAGTVVAAAHAGWRGLAGGVLQNTIAAMNVAPVEIMAYLGPAIGADAFEVGQDVF DAFCTPMPEAADAFEDIGGGKYLANIYELARLVLCREGVDMIYGGTHCTVLERDTFFSYR RDGQTGRMVSLIWLEQG >gi|257257240|gb|ACDX02000009.1| GENE 20 16785 - 17357 238 190 aa, chain - ## HITS:1 COG:no KEGG:PputGB1_3403 NR:ns ## KEGG: PputGB1_3403 # Name: not_defined # Def: hypothetical protein # Organism: P.putida_GB1 # Pathway: not_defined # 20 138 25 136 191 67 31.0 3e-10 MFDRLYLQLFQENKEILDQIRETNDEIGAVLRIHLICEQFLEIYICSFCNQEKMFWFQEK GNSEEQKITISFDHKLKMAKSLKLPDWGYNIFANVNTIRNRLAHRINGQIDYTRLESILS FIKSDVEPLIPFHKHFLDKFSLPDYSEEGGLFKFLNKIKTSEPRMTLVLSIYYTLIFLNL NIREKYETNE >gi|257257240|gb|ACDX02000009.1| GENE 21 17453 - 18577 1573 374 aa, chain - ## HITS:1 COG:NMB0704 KEGG:ns NR:ns ## COG: NMB0704 COG0564 # Protein_GI_number: 15676602 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthases, 23S RNA-specific # Organism: Neisseria meningitidis MC58 # 1 374 1 374 374 664 91.0 0 MQNTSFDNEADYNDDLDFTSAPEAESCVNLTVPLELAGGRLDAVLAKLMPDYSRSRLTSW IKEGAVIVNDKPAQPKDKMIGGESISVTVRPSEENLAFKPEAMDLDIVYEDDTVIVVNKP AGLVVHPAAGNWTGTLLNGLLAHCPELSQIPRAGIVHRLDKETSGLMVVAKTLPAQNSLV QQLQERTVKRIYRAVANGIVPFDGKIETQIGRDPHNRLKMAVVKFGGKPAVTHVKVLERY LAHSYIECSLETGRTHQIRVHMREANHPLAADPVYGNLRHPCSEPVKEAVKSLGARQALH AYRLSFVHPKTGETVSFEAPIPEDMYHLLSVLRLEAGLDSSLSNEEEWQDKLGTDDDDDW NEDDYDVEVVYVRD >gi|257257240|gb|ACDX02000009.1| GENE 22 18576 - 19382 1364 268 aa, chain + ## HITS:1 COG:NMA0907 KEGG:ns NR:ns ## COG: NMA0907 COG4105 # Protein_GI_number: 15793873 # Func_class: R General function prediction only # Function: DNA uptake lipoprotein # Organism: Neisseria meningitidis Z2491 # 1 267 1 266 267 430 85.0 1e-120 MKKILLVVSLSLALGACASNKGTVDKDAQITQDWNVEKLYAEAHDELNSSNYTRAIKLYE ILESRFPNGRYAQQAQLDTAYAYYKDDEPEKALAAIDRFQRHHPQHPNMDYALYLKGLVL FNEDQSFLNKLASQDWSDRDPKANRSAYQAFAELVQRYPESKYAADATERMAKLVDALGG NEISVARYYMKRGAYLAAVNRAQKIVERYQNTRYVEEALAMMELAYKKLDKPQLAADTRR VLETNFPQSPFLQHQWQPNDMPWWRYWR >gi|257257240|gb|ACDX02000009.1| GENE 23 19495 - 21021 2430 508 aa, chain - ## HITS:1 COG:NMB0878 KEGG:ns NR:ns ## COG: NMB0878 COG1171 # Protein_GI_number: 15676774 # Func_class: E Amino acid transport and metabolism # Function: Threonine dehydratase # Organism: Neisseria meningitidis MC58 # 1 508 1 508 508 887 87.0 0 MNNRPSYSDYLIRILTASVYDVAVETPLEPAIGLSGRLNNNVLLKREDLQPVFSFKIRGA YNKMAKLPKEALACGVIAASAGNHAQGVALSAQRLGCRAIIVMPETTPQIKIDAVKSRGG EVVLKGVSYNDAYDYAMELAEKEKLTYIAPFDDPDVIAGQGTVGMEIVRQRPDDIHAIFV PIGGGGLAAGVAAFVKQVRPSIKVIGVQTHDSCCMKQSVEAGKVVSLKDVGLFSDGTAVK VVGEETFRLCRDLLDDIITVDTDAICGAIKDIFDDTRSITEPAGALALAGLKTYAARNRI QNQTLVAVTSGANMNFHRLRHVSERSELGEGNEGIFAVTIPEERGSFLKFVNLLGSRNIT EFNYRYGDDQKAHIFVGLQTAGSQDLAVISRQLTEAGLPNVDLTEDEISKIHIRYMVGGR TTKVAHERLISFEFPERPGALARFLNHMQGGWNITLFHYRNHGADYGRILVGIDVPSTDD EAFEDFLESLGYSYQDETQNAAYRLFLA >gi|257257240|gb|ACDX02000009.1| GENE 24 21237 - 22490 1556 417 aa, chain + ## HITS:1 COG:NMB0877 KEGG:ns NR:ns ## COG: NMB0877 COG1686 # Protein_GI_number: 15676773 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Neisseria meningitidis MC58 # 40 401 20 383 389 390 53.0 1e-108 MKKTLSVLIATMMITAAQAAPQAAKNNAALTVAASEPAPAAASQPEAMMPSINSPDAPPA IAAAAYIVTDLHSHQVLASSNIDTQIEPASLTKMMTAYLTFKALENGTLRADQMLTVSDA GWKIEGSRMFLIPKVPASVSDLIKGMIVQSGNDAATTLAEAMGGGSVDVFVQQMNEEAKR LGMTKTHFKNPTGLAAEGHVSTVGDLAILSAALIHDYPKYYPVFSIKSFKYNNVEQPNRN LLLYRDSNVDGLKTGHTESAGYNLAASSKRNGRRIVSIVVGTDSTEARASESGKLLNWAL QAFDTPKLYNGGEIISKVKVYKGSSKSVNVGFLEDVYITIPHDAGQNIKPILETVQPVVA PIRKGQSLGKLKIVKDGKVITEKNVVALHSVEEGSWFRRMWDDIVLWFKGLFGSSSK >gi|257257240|gb|ACDX02000009.1| GENE 25 22576 - 23238 904 220 aa, chain + ## HITS:1 COG:NMB1071 KEGG:ns NR:ns ## COG: NMB1071 COG3318 # Protein_GI_number: 15676955 # Func_class: R General function prediction only # Function: Predicted metal-binding protein related to the C-terminal domain of SecA # Organism: Neisseria meningitidis MC58 # 1 219 1 219 220 328 72.0 5e-90 MQLQAFDETSRVRLMQLLDAKSEQHNTMRCDEVQAFMMALLSGPDALNPNDWLPEVLGEE SLFDAKERTEIERLVMALAADLRIKLGSKMLPDLWLYEDAAGNPDVYTWCNAYLYALDVV PTDWFEAVDQEEFEDLFYPIMALGGIYDEEQNGEIILHLTEKELSQLESDLPHVLLDIYW YWQAIINKPQTVRREGEKIGRNDSCPCGSGKKYKACCGKG >gi|257257240|gb|ACDX02000009.1| GENE 26 23311 - 23850 686 179 aa, chain - ## HITS:1 COG:NMB0932 KEGG:ns NR:ns ## COG: NMB0932 COG2839 # Protein_GI_number: 15676826 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 18 179 1 162 162 133 55.0 2e-31 MQAEFTHAFPFHQTRTVMTAIFILLGLIAICIGLLGTVYPAIPGLGLMFGGAWLLAYAGD YQIYGTNTLIFLAVVAAIGTAMDYVAGALGAKYTGASKTAVWGALIGGIVGAFFSIPGLL FGPLIGAGVGEFLARRDMWQAGKVGLGTFIGFIIGTVAKIGCALTIVMTLLVMWAASWF >gi|257257240|gb|ACDX02000009.1| GENE 27 24008 - 24967 1378 319 aa, chain - ## HITS:1 COG:NMA1465 KEGG:ns NR:ns ## COG: NMA1465 COG0037 # Protein_GI_number: 15794367 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control # Organism: Neisseria meningitidis Z2491 # 1 319 1 319 319 629 96.0 1e-180 MSKKTKQELENNKLNKRLRHAVGDAINDFNMIEPGDKIMVCLSGGKDSYALLDILRQLQA SAPIDFELVAVNLDQKQPGFPEEVLPTYLESIGVPYKIVEEDTYSTVKRVLDEGKTTCSL CSRLRRGILYRTAKELGCTKIALGHHRDDILATMFLNMFYGGKLKAMPPKLVSDNGEHIV IRPLAYVKEKDLIKYAELKQFPIIPCNLCGSQPNLQRQVIGDMLRDWDKRFPGRIESMFS ALQNVVPSHLADPELFDFVGLERGQTLKHGGDLAFDSEKMPERYSDGSEEDESEIKITPS KPERKVINILANKPKTCGA >gi|257257240|gb|ACDX02000009.1| GENE 28 25113 - 27278 2814 721 aa, chain - ## HITS:1 COG:NMB1325 KEGG:ns NR:ns ## COG: NMB1325 COG2217 # Protein_GI_number: 15677191 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Neisseria meningitidis MC58 # 1 721 1 720 720 1228 94.0 0 MQQKVRFQIEGMTCQACASRIEKVLNKKDFVAEAGVNFASEEAQVVFDDSQTSAADIAKI IEKTGYGAKEKTEDALPQPEETAHVSWRLWLLLAINIPFLIGMAGMMIGRHDWMIPPVWQ FALASVVQLWLAIPFYKSAWASIKGGLANMDVLVTIGTVSIYLYSVYMLFFSPHAAHGMA HVYFEAGVMVIGFVSLGKFLEHRTKKSSLNSLGLLLKLTPTQVNVKRDGEWKQLPIDQVQ IGDRIRANHGERIAADGIIESGSGWADESHLTGESNPEEKKAGGKVLAGALMTEGSVVYR ATQLGSQTLLGDMMNALSEAQGSKAPIARVADKAAAVFVPAVVGIALLTFIATWLVKGDW TVALMHAVAVLVIACPCALGLATPAAIMVGMGKAVKHGIWFKDAAAMEEAAHVDAVVLDK TGTLTEGRPQVAAVYCVPDSGFDEDALYRIAAAVEQNAAHPLARAIVSAAQARGLDIPAA QNAQTVVGAGITAEVEGAGLVKAGKLDFAELKLPENLSDDVWRIASIVAVSANGKPIGAF ALADALKTDTAEAIGRLKKHGIDVYIMSGDNQGTVEYVAKQLGIAHAFGNMSPRDKAAEV QKLKAAGKTVAMVGDGINDAPALAAANVSFAMKGGADVAEHTASATLMQHSVNQLADALL VSQATLKNIKQNLFFAFFYNILGIPLAALGFLNPVIAGAAMAASSVSVLSNALRLKRVKI E >gi|257257240|gb|ACDX02000009.1| GENE 29 27378 - 27587 428 69 aa, chain - ## HITS:1 COG:NMA1476 KEGG:ns NR:ns ## COG: NMA1476 COG2608 # Protein_GI_number: 15794377 # Func_class: P Inorganic ion transport and metabolism # Function: Copper chaperone # Organism: Neisseria meningitidis Z2491 # 1 69 25 93 94 91 72.0 4e-19 MQTITLNIEGMTCGGCVKSVTSILEGVNGVDKAEVSLENKNAVVEFDPAQTNPAALIEAV EDGGYDAAL >gi|257257240|gb|ACDX02000009.1| GENE 30 27735 - 28127 461 130 aa, chain + ## HITS:1 COG:HI0293 KEGG:ns NR:ns ## COG: HI0293 COG0789 # Protein_GI_number: 16272248 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Haemophilus influenzae # 2 127 1 126 128 167 66.0 5e-42 MMNISQAAAESGLSAKQIRDYEKHGLIAPAARSEAGYRRYGQADLARLRFIRHAREVGFS LPQIGQLLSLQHNPQRTSREVKTLTARHIAELEAKIERLQGMVAELQRWHDACAGDDCPD CAILAGLEER >gi|257257240|gb|ACDX02000009.1| GENE 31 28165 - 28512 304 115 aa, chain + ## HITS:1 COG:NMA1253 KEGG:ns NR:ns ## COG: NMA1253 COG3039 # Protein_GI_number: 15794187 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS5 family # Organism: Neisseria meningitidis Z2491 # 2 115 222 335 335 194 86.0 2e-50 MPLLEGIAEGTTVYADKGYDSKENRQHLKEHQLLDGIMRKAHRNRPLTEAQTKRNRYLSK TRYAVEQSFGTPHRKFRYAQAAYFGLLKVSAQSHLNAMCLNLLKAANRLSVSVAA >gi|257257240|gb|ACDX02000009.1| GENE 32 28915 - 29700 747 261 aa, chain + ## HITS:1 COG:MA0486 KEGG:ns NR:ns ## COG: MA0486 COG3384 # Protein_GI_number: 20089375 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Methanosarcina acetivorans str.C2A # 2 259 3 252 258 238 45.0 1e-62 MKKMPVLFVGHGSPMNVLDKENPFNQNLSLITQKFAKPKAILMISAHWYSSRLQITSGEQ PGMIYDFYGFPEELSQVQYPAPGSPELAEQVRSLLQPENVELNPTRGFDHGTWAVLKFLY PDADIPVVQLSLNRLQSAEWHFNLAKKLSALREQGVLIIGSGNIIHNLGVMSRAHINQIG AGYDWAFDFREAVNQAIVERDDDTLIHYERLGEKAMLSVPTPDHYLPFLCIMALREPDDS ITFFNDNLVAGSLSMTSLLVV >gi|257257240|gb|ACDX02000009.1| GENE 33 30061 - 30996 1076 311 aa, chain - ## HITS:1 COG:SP0764 KEGG:ns NR:ns ## COG: SP0764 COG0167 # Protein_GI_number: 15900658 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotate dehydrogenase # Organism: Streptococcus pneumoniae TIGR4 # 1 310 1 310 311 525 82.0 1e-149 MPSLRTQIAGFSFDNCLMNAAGVACMTVEELEEVRQSAAGSFVTKTATLEARAGNPEPRY RDVPLGSINSMGLPNQGIDYYLDYLLSLQESQPERTFFLSLVGMSPDETHTLLKKVQNSG FKGITELNLSCPNVPGKPQIAYDFETTERILGEAFGYFDKPLGIKLPPYFDIVHFDQAAE VFNRHPLKFVNCVNSIGNGMYIEDESVVIRPKNGFGGIGGEYIKPTALANVHAFYQRLNP SIQIIGTGGVYTGRDAFEHILCGASMVQIGTALHQQGVEVFERVSLGLKAIMAQKGYETL EDFKGKLKYLG >gi|257257240|gb|ACDX02000009.1| GENE 34 31249 - 32430 1489 393 aa, chain - ## HITS:1 COG:NMB1371 KEGG:ns NR:ns ## COG: NMB1371 COG4992 # Protein_GI_number: 15677236 # Func_class: E Amino acid transport and metabolism # Function: Ornithine/acetylornithine aminotransferase # Organism: Neisseria meningitidis MC58 # 1 393 1 393 398 681 83.0 0 MQNYLTPNFSFAPMIPERALGSRVWDTEGREYIDLSGGIAVNALGHCHPDLVAALAEQSQ KLWHISNIYTTKPAQELAQKLVEHTFADKVFFCNSGAEANEAALKLARKYGRDHFGGHKT EIISCLNSFHGRTLFTVSVGGQPKYSKDYAPLPQGITHVPFNDIAALEAAISENTCAVII EPIQGESGILPATQEYLQAARRLCDEHGALLILDEVQTGMGHTGKLFAYEHYGITPDILS SAKALGGGFPIGAILTTDKIAPTFGPGTHGSTFGGNPMACAVGSRAFDIINAPETLAHVE KQGQKLQTTLRELGEKTGVFKEVRGMGLLIGCVLADQYKGRASEITAAALKHGLMVLVAG AGVVRFAPSLLLNDEDMAEGLKRLEAALTEWIA >gi|257257240|gb|ACDX02000009.1| GENE 35 32474 - 32914 473 146 aa, chain + ## HITS:1 COG:no KEGG:NLA_13560 NR:ns ## KEGG: NLA_13560 # Name: not_defined # Def: hypothetical protein # Organism: N.lactamica # Pathway: not_defined # 35 145 1 110 110 169 76.0 4e-41 MRRLKQSFKQEWAGRNESRNFGYNMDFTDRRKKIMNILPYQTEIAERMLVGTEGETIHPD AQFVQTANGYWIAWHEGNAALLAPDTPPDIPCFWVEGAQSLEELVELVENGEFDEMEEFD GDDDAWHEHAAGCDGGHDGYCGCSHS >gi|257257240|gb|ACDX02000009.1| GENE 36 32923 - 33225 190 100 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261364935|ref|ZP_05977818.1| ## NR: gi|261364935|ref|ZP_05977818.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 100 9 108 108 130 100.0 2e-29 MKTLLLPLVCLALNGCVVRAAVDLAATTVMTAGKVVVKGTGAVIDAAIPDRDKKKDREKD KGKNRRPVSDDGLYPGSYPPASEEGGYSGLTLNQYGVASP >gi|257257240|gb|ACDX02000009.1| GENE 37 33486 - 34286 1158 266 aa, chain - ## HITS:1 COG:NMA1160 KEGG:ns NR:ns ## COG: NMA1160 COG0688 # Protein_GI_number: 15794106 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine decarboxylase # Organism: Neisseria meningitidis Z2491 # 1 266 1 265 265 428 80.0 1e-120 MNRLYPHPIIAREGWPFIGGGLVLSLLVSACCGWWSLPFWIFTVFALQFFRDPAREIPQD PEAILSPVDGRIVVVERARDPYRDTEALKISVFMNVFNVHSQKSPADCTVTAVEYNKGKF LNADLDKASTENERNAVLATTASGREITFVQVAGLVARRILCYTKVGEKLTRGERYGFIR FGSRVDMYLPVDAQAQVAIGDKVTGVRTVLARLPLQAPEAAAPTETTTAAQTETTAPAQI AAEVAQSEIEAAADKVRNAAEQALKD >gi|257257240|gb|ACDX02000009.1| GENE 38 34506 - 37385 4023 959 aa, chain + ## HITS:1 COG:NMB0962 KEGG:ns NR:ns ## COG: NMB0962 COG0178 # Protein_GI_number: 15676855 # Func_class: L Replication, recombination and repair # Function: Excinuclease ATPase subunit # Organism: Neisseria meningitidis MC58 # 1 955 1 946 949 1873 96.0 0 MCNHHHQNDSKTPRSEARDNDTIRIRGARTHNLKNIDLDIPRHKLVVVTGLSGSGKSSLA FDTLYAEGQRRYVESLSAYARQFLQMMDKPDVDLIEGLSPAISIEQKSTSHNPRSTVGTV TEIHDYLRLLYARVGTPYCPEHNLPLSSQTVSQMVDAVLKLPEDTRVMILAPAVRERKGE FVDFFADLQAQGFARVRVDGEVYQLDEVPKLEKNIKHNIDVVIDRVKVKADIKQRLAESF ETALRHGNERALAMEMDSGEEHWFSARFACPVCSYSLPELEPRLFSFNNPMGSCPTCDGL GNTNFFDPEKVVAHPELSLATGAIDGWDKRNQFYFQMIQSLARHYGFDVQAAWETLPEKV KKVVLHGSGKEVIDFTYLSERGTTFNRSHAFEGIIPNLERRYRETDSETVREKLREYQNH RACPSCGGARLRKEARYVYVSGEPLHEVSAWPLTKTHQFFETLDLDGNKKQIAEKILKEI TERLGFLINVGLDYLNLSRSAETLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRD NDRLLATLKRLRDLGNSVIVVEHDEDAIREADFVVDMGPGAGEHGGNVLIADTPENVAKC EKSVTGQYLSGKKSIAVPSERTPVNPERMLVLKGARGNNLKNVTLELPLGLITCITGVSG SGKSTLINDTLAKITARELNRAQEEPAPYDDITGLEHLDKVINVDQSPIGRTPRSNPATY TGLFTPIRELFAGVPLSRERGYNVGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCE VCHGKRYNRETLEIQYKGKNISQVLDMTVEEAREFFDAVPTVSRKLQTLMDVGLGYIRLG QSATTLSGGEAQRVKLALELSKRDTGRTLYILDEPTTGLHFADIALLLEVIGRLKGKGNS IVIIEHNLDVIKTADWIVDLGPEGGDGGGRIIAEGTPEEVVKFKKKSHTAKYLKLNFLK >gi|257257240|gb|ACDX02000009.1| GENE 39 37407 - 38594 391 395 aa, chain + ## HITS:1 COG:no KEGG:Spro_0111 NR:ns ## KEGG: Spro_0111 # Name: not_defined # Def: hypothetical protein # Organism: S.proteamaculans # Pathway: not_defined # 1 387 1 367 368 296 44.0 9e-79 MKIKSVKIFGLHKHSEIINLTFNDDLNIITGRNGAGKTTILKLIWYVLSGHIDLAIKEIE FDKLVVCTDIYKCSINKINKNTCKVEWRWENKEKEEVFEDQVEHRSFYYGEDGETIIVDE DDGIIIQNAEEIPNRRLQNTGASVFLPTFRRIEGGFLTDSRPLSRRLSFESFSATASIEE ALSNLSDRLTVNNHIFVASLSTFDIESLLIKKHSELSEKYNRIQQKVTSDTMDRIKKSRE SNGDAQEDILKLIQKDIEEMEKRRQEIMKPLDTVKESVLKFFKNHRGIKLGKSKVLNFGD AANAINSNFLSAGEKQMLSFLAYNTFYKDAIFIIDEPELSLHVDWQRILLSTLVKQGTSN QFIVATHSPFIYSKYPEKEIQLNPDRGYCDTFELE >gi|257257240|gb|ACDX02000009.1| GENE 40 38600 - 39361 150 253 aa, chain + ## HITS:1 COG:no KEGG:FIC_01025 NR:ns ## KEGG: FIC_01025 # Name: not_defined # Def: hypothetical protein # Organism: F.bacterium # Pathway: not_defined # 1 219 7 211 252 99 32.0 2e-19 MTLHAQLTEDEIIATLERSSFEVTILVEGSDDIIIYRNLEGFLEKKGYSYIDVLGVGGRN TILNIFNKKKSGSILQDKKIIFIVDKDIWVNVGIPDQYINKNLIFTFGYSIENDVFMDVN CSAIVNSSPSQNEYEVYLDKFMQWYVLALQATINNIGNTTDLSDKRSIGRHPCEVMNRYE EFCQLDDGETYPIELLNVLKENIYCLLRGKSLLAIFTKICKNHTPKGLFEIAAANPKNHI QRIFNDVEKLLKQ >gi|257257240|gb|ACDX02000009.1| GENE 41 39265 - 39516 59 83 aa, chain - ## HITS:1 COG:no KEGG:NMO_0858 NR:ns ## KEGG: NMO_0858 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 2 40 11 49 98 61 87.0 9e-09 MLKRQTVNQTTACVRTAHTLRAGFEVPRNSQVGCVAQPRTWSVGMQATACYTYCFNNFST SLNILCIWFLGLAAAISNNPLGV >gi|257257240|gb|ACDX02000009.1| GENE 42 39623 - 39835 157 70 aa, chain + ## HITS:1 COG:no KEGG:NMO_0029 NR:ns ## KEGG: NMO_0029 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 39 70 112 143 143 62 84.0 5e-09 MARYRRNFIAGGTFFFTVKLANPKSRLLVEHIDLLRAAYMDVYSGLTLNQYGVASPCRTI CTVCGFVALS >gi|257257240|gb|ACDX02000009.1| GENE 43 40182 - 40550 462 122 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261364942|ref|ZP_05977825.1| ## NR: gi|261364942|ref|ZP_05977825.1| putative late embryogeneis abundant protein [Neisseria mucosa ATCC 25996] putative late embryogeneis abundant protein [Neisseria mucosa ATCC 25996] # 27 89 27 89 122 84 100.0 2e-15 MKTSALLATLLTALSLSACGGSSSSAVCDEYEKAFADITKGVDAGTKDLMQKSFEQTKAA LKDMPADQRDATCKAALDGLKGNAPAASPEDKAEEAKEAAEEAKDAAEEAKDEAAAAKEE AK >gi|257257240|gb|ACDX02000009.1| GENE 44 40831 - 41043 59 70 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MACVVCWEQMLLKSSLKYLRKRLGNFAKESTFCIFDFRVIECFCYNGVCLSFDLYFKPWL WIRVLYSHCF >gi|257257240|gb|ACDX02000009.1| GENE 45 41172 - 41708 479 178 aa, chain + ## HITS:1 COG:no KEGG:DNO_0911 NR:ns ## KEGG: DNO_0911 # Name: nrdG # Def: anaerobic ribonucleoside-triphosphate reductase activating protein (EC:1.97.1.4) # Organism: D.nodosus # Pathway: not_defined # 1 156 1 156 160 210 66.0 2e-53 MKTLKFTIEQIVWQEVPGEVSLAFLFSGCPLRCKGCHSADAWKEGIGTELTEDYLRGRLK RYRGLISCVLFMGGEWQPEALQKMLGIVTQAGLKACLYTGLEREELEAVSDGILPYLTYL KTGRWQMELGGLDSPTTNQKFIDLRTGEVLNRLFIKDQSAPKIIPITTQPQAAAFQTA >gi|257257240|gb|ACDX02000009.1| GENE 46 41743 - 43524 2667 593 aa, chain + ## HITS:1 COG:TM0385 KEGG:ns NR:ns ## COG: TM0385 COG1328 # Protein_GI_number: 15643151 # Func_class: F Nucleotide transport and metabolism # Function: Oxygen-sensitive ribonucleoside-triphosphate reductase # Organism: Thermotoga maritima # 13 589 39 644 651 241 30.0 4e-63 MIRLHPEQLNGKLQFMHDYISAQNAADGSKMDANANVTQKNIATMEAEIMKDFFVQINRA QVSRKIAEIFDQSVADEYIRQIEAHEIYVHDETSLKPYCVSVTLYPFLLDGLSKLGGESK APQHLASFCGSFINLVFAISAQFAGAVATVEFLTYFDYFARKDYGDDYLETHGKEIANHM QQVVYSINQPAAARGYQSVFWNISVYDQYYFDAMFGDFVFPDFSKPVWASVAKLQNFFLK WFNQERTKAVLTFPVVTAAMLTDGGKCKDTVFADEMAKELAEGNSFFVYLSDNPDSLASC CRLRNAIEDRTFSYTLGAGGVATGSINVITINMNRLEQDGRDLAAEVAKIHKYQYAYRKL MEEYQAAGMLPVYDAGFITLDKQFLTIGINGMAEAAESQGIKVGYNDDYIHFVQGRLKII FEANQAASKHYGVKFNTEFVPAENLGVKNAKWDKADGYKVSRECYNSYFYVVEDEEINAL DKFLLHGKELVDWLDGGSALHLNLDEALPESGYRSLLDIAAQTGCNYFCVNVRITICNEC GHIDKRTLHACSACGSHDIDYGTRVIGYLKRVSAFSSGRRKEHALRHYHRKAA >gi|257257240|gb|ACDX02000009.1| GENE 47 43686 - 44015 491 109 aa, chain - ## HITS:1 COG:no KEGG:NGK_0946 NR:ns ## KEGG: NGK_0946 # Name: not_defined # Def: putative secreted protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 3 109 5 110 110 99 58.0 3e-20 MKKTIAALLLSSLVVTGCATQGSSVGDLAIGDDSAAIKAGRNRASAQLSRAELEQHRRQR ANVSEELALEREKRANKRDQINGAMGTAAGAVGLIGGIAGTAALIKAWF >gi|257257240|gb|ACDX02000009.1| GENE 48 44058 - 44309 226 83 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261364946|ref|ZP_05977829.1| ## NR: gi|261364946|ref|ZP_05977829.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 83 1 83 83 112 100.0 6e-24 MLKKTVLMSLVLSALVGCSPTYGNMRFLPSPEQEATMRADSQRVQRDERVERAERRRERR EEMMDEADAIKRAYGNQKIYILH >gi|257257240|gb|ACDX02000009.1| GENE 49 44727 - 45599 1360 290 aa, chain - ## HITS:1 COG:YPO2149 KEGG:ns NR:ns ## COG: YPO2149 COG1741 # Protein_GI_number: 16122382 # Func_class: R General function prediction only # Function: Pirin-related protein # Organism: Yersinia pestis # 1 290 1 287 289 337 57.0 2e-92 MRNVKQIYRANSQHWVGDGFLVQPLFSHMGDDRGTNPFLMLDYAAPHEFAPNETRHPRGV GQHPHKGFETVTIAYHGEVAHRDSSGGGGIIYEGDVQWMTAGSGIIHEEFHSENFSKKGG LFEMVQLWVNLPAKDKNTPPRYQHLAKADIPVVEFPDEAGYLRLIAGEYKGVKGAADTFT EMNVWDIVLNASKKTVLEIPETHNLSMVVLRGNVTLNGKEQAGAGQLVGFEKSGSNVHIE AGSEEVKILLLSGVPIDEPVVGYGPFVMNTTEEIRQAISDFKSGKFGGID >gi|257257240|gb|ACDX02000009.1| GENE 50 45762 - 46118 164 118 aa, chain + ## HITS:1 COG:BH0737 KEGG:ns NR:ns ## COG: BH0737 COG1733 # Protein_GI_number: 15613300 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Bacillus halodurans # 12 118 14 115 118 139 64.0 1e-33 MEETEHPHDSCCPVVNTLDIIGGKWKVLILYYLHGETRRFNELQRLLAGVTQRMLTLQLR ELENDGIVHREVYPQVPPKVEYSLTAFGQTLMPVIEAMHRWGVQYAAECVKHRKQPQE >gi|257257240|gb|ACDX02000009.1| GENE 51 46238 - 46729 366 163 aa, chain + ## HITS:1 COG:no KEGG:NMC1253 NR:ns ## KEGG: NMC1253 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 3 161 2 160 160 187 59.0 1e-46 MNMKKTVIALLLAVCAGTAGAADTYGYLVMWQNPADGGSAVQLKTTKENASQLEANAELE AFCRAQDTLSGVQQGQATGCKSVIPLHNTCIALAYPKAQGGLTAENVVAITSPRFKSVHQ TALNQCIKKYGTQGQCGLEIAYCTSADLYSGQVRAFWNRLKSL >gi|257257240|gb|ACDX02000009.1| GENE 52 46842 - 47408 766 188 aa, chain - ## HITS:1 COG:NMA1469 KEGG:ns NR:ns ## COG: NMA1469 COG0652 # Protein_GI_number: 15794370 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family # Organism: Neisseria meningitidis Z2491 # 1 188 1 185 185 230 64.0 1e-60 MNKTLKLTFAALVLAAAFNAQAETRAVIETNMGNINLSLDEAKAPKTVANFVSYARKGFY DNTVFHRVIDGFMIQGGGFTPDLAQKATDKAVINEADNGLKNTVGTIAMARTGDPNSATS QFFINTADNAFLNFKNKTPQGYGYAVFGKVTSGMDVVRQISKTPTETRGFHQNVPVKPII IKRITVTQ >gi|257257240|gb|ACDX02000009.1| GENE 53 47557 - 48120 1002 187 aa, chain - ## HITS:1 COG:NMB1030 KEGG:ns NR:ns ## COG: NMB1030 COG2353 # Protein_GI_number: 15676917 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis MC58 # 1 187 1 187 187 313 91.0 1e-85 MKKIIFAALAAAAIGTASAATYKVDEHHANARFAIDHFNTSTNVGGFYGLTGSVDFDQAK RTGKIDITIPVANLQSGSLHFTDHLKSADIFDAAKYPNIHFVSTKFNFNGKKLLSVDGNL TMHGKTAPVKLKAEKFNCYQSPMAKTEVCGGDFSTTIDRTKWGVNYLVDAGMTKNVRIDI QIEAAKQ >gi|257257240|gb|ACDX02000009.1| GENE 54 48388 - 50835 2903 815 aa, chain - ## HITS:1 COG:NMB1314 KEGG:ns NR:ns ## COG: NMB1314 COG1674 # Protein_GI_number: 15677180 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Neisseria meningitidis MC58 # 1 815 1 812 812 1256 81.0 0 MTAKSSKTASKPKAKTNAKPTTRRQSQTKAQTEPNKVSERLKAAKALQKNEEKKARPEHV VNLINDALWLFGLMVTVFIAISLASFKMTDPAWSRSVPKPDGIANFGGLFGAYVSDVGYY LFGLSFWWWIAASCVFLYKNFRPLQKRENYKSYNHGVAALALFLLLVCSPILEYFTLQNT LDETLPVGAGGLVGALAGSGLAWLLGKSGSLLIMCVMLLLSVSLLAQVSWLEVMAKTGRN TESLFSGIWGRLKKALGRRKDDGSTAEALETENTRRMVKEAKNITATPVAPLAGSTSNRK SVAVSVAPPPKIQASLFEDNEPQQTGEYHKPSMSLLRLPNGEPVSINPAELERTAELIES KLAEFGIGVQVVSATSGPVITRYEIEPAQGIKGSQIVALSKDLARSMSLQAVRIVETIAG KNTMGIELPNEKRQDVMLSEILSSPVFTEAKSKLTVALGKDIAGTPVVGDLAKMPHLLVA GMTGSGKSVGVNGMIMSMLFKATPEEVRFIMIDPKMLELSIYDGIPHLLCPVVTDMREAG QALNWCVAEMEKRYRLLSHAGVRNLEGFNQKVEAAKASGKPMPNPFSLNPDDPEPLEKLP MIVVVIDELADLMMTERKAVEQQIARLAQKARAAGIHMIVATQRPSVDVVTGLIKANIPT RMAFTVQSKIDSRTILDQMGADELLKYGDSLFLQPGSAEPTRLQGAFVSDDEVHQVVNYV KSQAPADYIEGLLSGEAALETTNIVNPNAGSDELFDQAVAYILESKKTSISSLQRQLRIG YNRAANLMEALENAGVVSPADINGSRRILAQKDQL >gi|257257240|gb|ACDX02000009.1| GENE 55 51006 - 52370 1770 454 aa, chain - ## HITS:1 COG:PM0380 KEGG:ns NR:ns ## COG: PM0380 COG0733 # Protein_GI_number: 15602245 # Func_class: R General function prediction only # Function: Na+-dependent transporters of the SNF family # Organism: Pasteurella multocida # 2 453 3 454 455 613 74.0 1e-175 MSSNQPRQTWSNRLTYILTVAGATVGFGATWRFPYLVGENGGGAYVFLFCIAMFVIGIPM ILVENVIGRRKGVNALDAFGGSMNGKPVAKIWKLVGWMGLLGAFGIMAYYMVLGGWVISY IVNIISGNLDISNPVSGEITKSFFTEHIENSPWEIAFYTLLFVVVNQWILVKGVIGGIEK AAKYLMPLLFLFLIAMVVRNVTLPGAMEGITFYLKPDFSKITAELFVFVLGQVFFALSLG FGVMITLSSYLDKNENLVQTAVITAITNTIIAVLAGFMIFPSLFSFGVAPNSGPTLVFQS LPIVFSNMWAGPVFAVIFFSLLLIAALTTSLTIYEVLITTIQEKTKIRRTAAITIVLAAI FIFGNIPSILSYGPWKDVSVFGKNIFDAFDYISGNILFMLTALGSALFVGFVMKDEAKDE LLYKGNHTTVNIWFAYVKYLVPLVILLIFVSNLF >gi|257257240|gb|ACDX02000009.1| GENE 56 53003 - 53476 500 157 aa, chain + ## HITS:1 COG:NMA0940 KEGG:ns NR:ns ## COG: NMA0940 COG3030 # Protein_GI_number: 15793898 # Func_class: R General function prediction only # Function: Protein affecting phage T7 exclusion by the F plasmid # Organism: Neisseria meningitidis Z2491 # 1 157 1 160 161 178 64.0 3e-45 MQFFGIGFLVLIFLEIMSIVWVADWLGGSVALLLMVISFVSGVFMLRNTGLSGILLAGAT IRGGGKVSLYQMLWPIRYAVAAVCLMSPGFISTGLALLLLLPFKGRPVVQAEMDGNMFGQ RPFSTKAQDDDVIEGEYTVTGEDSDTKHQAYIEHKKD >gi|257257240|gb|ACDX02000009.1| GENE 57 53567 - 54127 778 186 aa, chain - ## HITS:1 COG:no KEGG:NMCC_1281 NR:ns ## KEGG: NMCC_1281 # Name: not_defined # Def: membrane lipoprotein # Organism: N.meningitidis_053442 # Pathway: not_defined # 1 186 22 205 205 215 78.0 8e-55 MKKIIALAALSAFALAACKDNTQAQLEQQQKQIEALQQQLAQQNGQQDNTVYQLTPEAVQ DTIPAEAQANGNNGQPVTGKDGQQYIYDQSTGSWLLQSLIGTAAGAFIGNALANKFTRAN NQNSPIAQRARTHYYQSARPNGRTSQQLNTRSIPAQQAQQQPRYRQTTQQPSNYRRPMGR GFGRRR >gi|257257240|gb|ACDX02000009.1| GENE 58 54255 - 54755 467 166 aa, chain - ## HITS:1 COG:no KEGG:NMCC_1282 NR:ns ## KEGG: NMCC_1282 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_053442 # Pathway: not_defined # 1 166 1 166 166 156 53.0 3e-37 MNLSANIQRRPQTLHRCHMIVDGNSHNTFSDDPVPQTSGLISEALIPQIRSLATLIAAER HDFNCNSPAVFTEEADFFAARILILGVRRFHLDITLMPMLKTANQRAQTFAKHHHLPFSP AEMHMSLHARRPDKLLIMETEHEVKPQGNIVADSLAFAAKLPKLPL >gi|257257240|gb|ACDX02000009.1| GENE 59 55234 - 57144 2948 636 aa, chain - ## HITS:1 COG:DR0933 KEGG:ns NR:ns ## COG: DR0933 COG0366 # Protein_GI_number: 15805957 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Deinococcus radiodurans # 22 633 5 640 644 461 42.0 1e-129 MLTQTQQVDLTLHHLKERALAEYSPKQRATIEASEDWKQFDRRLNEHFPKLMHELDNVYN DNEAVLPMLEQLIAQAWQSYSQRDKSLKAIDAARESDPDWILSNKQVGGVCYVDLFAGDL KGLKAKIPYFQELGLTYLHMMPLFKCPEGKSDGGYAVSSYRDVNPALGTIDDLRDVIAAL HEAGISAVVDFIFNHTSNEHEWAKGCAAGNPLFDNFYYIFPDRWMPDQYDRTLREIFPDQ HPGGFSQLEDGRWVWTTFNSFQWDLNYSNPWVFRAMAGEMMFLANLGVDILRMDAVAFIW KQMGTDCENLPQAHALIRAFNAVMRIAAPAVFFKSEAIVHPDQVVQYIGQDECQIGYNPL QMALLWNTLATREVNLLHQALSYRHNLPDHTAWVNYVRSHDDIGWTFADEDASQFGIHGY DHRQFLNRFFVNHFDGSFARGVPFQYNPNTGDCRVSGTAAALAGLAQHDPHAVDRIKLLY SIALSTGGLPLIYLGDEVGTLNDDDWSSDSNKSDDSRWAHRPRYNAELYEQRHDASTAAG QIYQGLRHMIDIRQNNPRLNGGRLVTFNTNNKHIIGYIRNNALLAFGNFSEHAQTISAHT LQAMPARAKDLISGETVALNQDLVLRPYQVMWLEIA >gi|257257240|gb|ACDX02000009.1| GENE 60 57591 - 58556 263 321 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148987750|ref|ZP_01819213.1| ribose-phosphate pyrophosphokinase [Streptococcus pneumoniae SP6-BS73] # 6 313 12 315 317 105 28 7e-22 MSYTQLTQDERYHIQYLSRHCTIAEIAKQLNRHKSTISREIRRHRTQGQQYSAEKAQRQS RLTKQRRRKPYKLDSQLIQHIDTLIRRKLSPEQVCAYLRKHHQITLHHSTIYRYLRQDKS NGGTLWQHLRICSKPYRKRYGSTWTRGKVPNRVGIENRPAVVDQKSRIGDWEADTIIGKD QKSALLTLVERVTRYTIICKLDSLKAEDTALAAIRVLKAHKARVHTITMDNGKEFYQHTK IAKALKAETYFCRPYHSWEKGLNENTNGLIRQYFPKQTDFRNISDREIRRVQDELNHRPR KTFGYETPSVLFLNLFKPLIH >gi|257257240|gb|ACDX02000009.1| GENE 61 58680 - 60968 2785 762 aa, chain - ## HITS:1 COG:NMB0964 KEGG:ns NR:ns ## COG: NMB0964 COG1629 # Protein_GI_number: 15676857 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Neisseria meningitidis MC58 # 1 762 1 758 758 1443 93.0 0 MTHTTLKPIVLALLIINLPAVAQAHETEQTVDLETVNVVGKSRPRATSGLLHTSTASDKI ISGDTLRQKAVNLGDALNGVPGVHASQYGGGASAPVIRGQTGRRIKVLNHHGETGDMADF SPDHALMVDTALSQQVEILRGPVTLLYSSGNVAGLVDVADGKIPEKMPENGVSGELGLRL SSGNLEKLTSGGINVGLGKNFVLHTEGLYRKSGDYAVPRYRKEEGRLKRLPDSHADSQTG SIGLSWVGEKGFIGAAYSDRRDRYGLPAHSHLYDDCHADIIWQKSLINKRYLQLYPHLLT EEDVDYDNPGLSCGFHDDDNAHAHTHNGRPWIDLRNKRYEIRAEWKQPLPGFEALRVHLN RNDYRHDEKAGDAVENFFKNKTQNARIELRHQPIGRLKGSWGVQYLTQKSSALSAIPETV QQPMLIDNDVHHYSFFGVEQANWDNFSLEGGVRVEKQKAAIQYDKALIDRENYYNQPLPD LGAHRQTAHSFALSGNWYFSPYHKLSLTASHQERLPSTQELYAHGKHVATNTFEVGNKHL NKERSNNIELALGYEGDRWQYNLALYRNRFGNYIYAQTLNDGRGPKSIEDDSEMKLVRYN QSGADFYGAEGEIFFKPTPRYRIGLSGDYVRGRLKNLPSLPGREDAYGNHPLIAQADQNA PRVPAARLGFHLNAALTDRIDAHLDYYRVFAQNKLARYETRTPGHHMLNLGANYRRRTGY GEWNWYVKADNLFNQSVYAHSSFLSDTPQMGRSFTGGVNFKF >gi|257257240|gb|ACDX02000009.1| GENE 62 61281 - 61757 729 158 aa, chain - ## HITS:1 COG:FN0550 KEGG:ns NR:ns ## COG: FN0550 COG0662 # Protein_GI_number: 19703885 # Func_class: G Carbohydrate transport and metabolism # Function: Mannose-6-phosphate isomerase # Organism: Fusobacterium nucleatum # 34 158 17 141 141 145 57.0 3e-35 MKPLFAALSVAFLIGTTVSVHAAEQAKPTDRSVQVYKKADLAEWNRENAAGGKGPLLGRF AFNRHQTAAQDAFREIGWLTLPPGASIGEHKHTDNEDVYIIVSGKGVFTDSTGKQTQVGA GDITIARPGQSHALKNTGKEPLVFLDLIAETAAAQTAK >gi|257257240|gb|ACDX02000009.1| GENE 63 61917 - 62279 417 120 aa, chain + ## HITS:1 COG:no KEGG:Mmcs_0699 NR:ns ## KEGG: Mmcs_0699 # Name: not_defined # Def: hypothetical protein # Organism: Mycobacterium_MCS # Pathway: not_defined # 1 114 1 109 114 61 33.0 1e-08 MTETQKIYTAWTQMWNGNLNIADELLSNDFKAHLTADSTPPPAPVTDIASAKAWIATIRA KADLHYEIMLGPFRDGDIISAYWRVTATFDNQTAVKVGTDFLKIKDGKITDCWTMNNNAA >gi|257257240|gb|ACDX02000009.1| GENE 64 62365 - 63774 2092 469 aa, chain - ## HITS:1 COG:NMA1758 KEGG:ns NR:ns ## COG: NMA1758 COG0260 # Protein_GI_number: 15794651 # Func_class: E Amino acid transport and metabolism # Function: Leucyl aminopeptidase # Organism: Neisseria meningitidis Z2491 # 1 468 1 468 468 801 94.0 0 MEFSTKAGTLQPQQAGAQLFVCTETAQLNHPTALALLSSLEEGQTFADTKIPTDNGLQAV AVVRLEKTDRAALNKAAAEAAKWAQNQETVNADIHAFDEAQAAAVAEAFAIAFGNAAYRF DRYKKEAKPAKFAQAVFHTAHEAAVKEALRVAEAQVYGQSLCRDLGNAAPNECTPEFLAR TAKAEAEKLGAHAKIIEKDYIKENMGSFWSVAKGSVEDPYLIELSYFGAADKEAAPVVLV GKGITFDTGGISLKPGLNMDEMKFDMCGAATVISTFCAAVKLQLPINLVAVVATCENMPS GAANKPGDVVKSMKGLTIEVLNTDAEGRLILCDALTYAEQFKPKAVIDVATLTGACIIAL GHDVSGVMGNNQDLVDSLLAASRNVDDKAWQLPLFETYKDQLKSNFADIPNIGTPGAGTI TAATFLSYFTEDYPWAHLDIAGTAWKSGSEKGATGRPVPLLLNYLRNVK >gi|257257240|gb|ACDX02000009.1| GENE 65 63943 - 65058 1776 371 aa, chain + ## HITS:1 COG:NMB1570 KEGG:ns NR:ns ## COG: NMB1570 COG0795 # Protein_GI_number: 15677420 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Neisseria meningitidis MC58 # 1 371 1 371 371 672 94.0 0 MIYQRNFIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMT PLLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAILIAVMQLWV MPWAELRSREYAEILKQKQELSMVEAGEFNSLGKRNGRVYFVETFDTESGIMKNLFLREQ DKNGNDNIIFAKEGNFSLNDNKRTLDLRNGYRYSGTPGKADYNRVSFQNLSLIISTTPKL IDPVSHRRTIPTSQLIGSSNPQHQAELMWRISLTVSVLLLCLLAVPLSYFNPRSGHTYNI LVAIGLFLIYQNGLTFLRNAVEDGKIHFWLGLLPMHIIMFAIAVVLLRVRSMPSQPFWQA VGKSLTLKGGK >gi|257257240|gb|ACDX02000009.1| GENE 66 65055 - 66125 1675 356 aa, chain + ## HITS:1 COG:NMA1760 KEGG:ns NR:ns ## COG: NMA1760 COG0795 # Protein_GI_number: 15794653 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Neisseria meningitidis Z2491 # 1 356 1 356 356 613 88.0 1e-175 MNLISRYIIRQMAVMAVYALLAFLALYSFFEIINEVGDLGKGSYNGATMAQYVLMQMPAR AYELMPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKLLLVLSQFGLIFALATAALGEW IAPVLSQKAENIKSTAINGKISTGNTGLWLKEKNSIINVREMLPDHTLLGIKIWERNDKN ELTQATEAESAVLNNDGSWQLKNIRRSTLSEDKVEVSTAAEENWPIAVKRNLMDVLLVKP DQMSVGELTTYISHLENNNQNTQIYAIAWWRKLVYPVAAWVMALVAFAFTPQTTRHGNMG LKLFGGICLGLLFHFAGRLFGFTSQLYGVPPFLAGALPTIAFALLAVWLIRRQERR >gi|257257240|gb|ACDX02000009.1| GENE 67 66505 - 67272 975 255 aa, chain - ## HITS:1 COG:NMA1659 KEGG:ns NR:ns ## COG: NMA1659 COG0710 # Protein_GI_number: 15794553 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate dehydratase # Organism: Neisseria meningitidis Z2491 # 4 251 16 263 265 269 54.0 4e-72 MKTLTIRHLTLGSGQPKIAVPLVARDEAALSAALKNLEHACFDIIEFRADYFAQAGNPEY LIAQAAAVRRAFPETPLLFTFRRAEEGGEYPCSKAYYFELLDKAAASGIIDIIDIELSAG ESEIRQAVATAKAHNTVVLMSNHDFHHTPAKSDITGRLKKMEEAGADICKIAVMPQSPAD VLTILDATWEARQAANRPIVTISMGKLGLVSRIAGSTFGSAITFGTAGTASAPGQLDSVN LKNILDVLENGNTAG >gi|257257240|gb|ACDX02000009.1| GENE 68 67269 - 67967 700 232 aa, chain - ## HITS:1 COG:no KEGG:CHU_1327 NR:ns ## KEGG: CHU_1327 # Name: not_defined # Def: hypothetical protein # Organism: C.hutchinsonii # Pathway: not_defined # 1 216 9 220 229 166 39.0 7e-40 MKKIFKILLKALLAFIIAAILYFAAAYILGKIPQDGTNASDGDVTLYLHSNGVHADVVMP LSDDLFDWTSIINPADSRAGQGDAPIRYVGIGWGERNFYLNTPQWSDLTASTAVQALSGV NSTLIHAVYYRDPPPEGENTVKFTVSREQYRRLSANLMRHFKLKAGKAIPVVGAHYSSDD AFYEAEGRYHLFNTCNSWLNRRLTESGINGVVWTPFPDPLLDSHRTNTAENP >gi|257257240|gb|ACDX02000009.1| GENE 69 68334 - 69752 1886 472 aa, chain + ## HITS:1 COG:NMB0792 KEGG:ns NR:ns ## COG: NMB0792 COG0471 # Protein_GI_number: 15676690 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Neisseria meningitidis MC58 # 1 471 1 471 471 720 92.0 0 MDLHAKDKTQHPENVELLSAQKPITDFKGLLTTIISAVVCFGIYHILPYSTDANKGIALL IFVAALWFTEAVHITVTALMVPILAVVLGFPDMDIKKAMAGFADPTIYIFFGGFALATAL HMQRLDRKIAVSLLRLSRGNMKVAVLMLFAVTAFLSMWISNTATAAMMLPLAMGMMSHLD QEKERKTYVFVLLGIAYCASIGGLGTVVGSPPNMIAAKALNLDFVGWMKLGLPMMLLILP LMLFSMYVILKPNLNERVEVKAESIPWTLHRVIALLIFLAAAVAWVFSSKIKEAFGISNP DTVIALIAAVAVVVFGVAQWKEVARNTDWGVLMLFGGGISLSALLQSSGASEALGQQVAS TFSHSPALLVIFVVATFIIFLTEFTSNTASAALLVPIFASIATQMGLPEQVLVFVIGIGA SCAFMLPVATPPNAIVFGTGLIKQREMMNVGLLLNVLCIVLVALWAYFVLMP >gi|257257240|gb|ACDX02000009.1| GENE 70 69860 - 70369 890 169 aa, chain + ## HITS:1 COG:NMA1002 KEGG:ns NR:ns ## COG: NMA1002 COG0652 # Protein_GI_number: 15793958 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family # Organism: Neisseria meningitidis Z2491 # 1 169 1 169 169 323 96.0 1e-88 MIILHTNKGDIKIELDFDKAPVTAKNFEQYVKDGFYDGVIFHRVIKGFMIQGGGMDENMN EKETREPIQNEASNGLPNEKYTIAMARTSDPHSASAQFFINTADNAFLNFRSKELYGKTV VQDWGYAVFGKVVDGFDVVDAIEGVATKRHGYHDDVPTEPVVITKAEVV >gi|257257240|gb|ACDX02000009.1| GENE 71 70957 - 71784 610 275 aa, chain - ## HITS:1 COG:NMB1305 KEGG:ns NR:ns ## COG: NMB1305 COG0627 # Protein_GI_number: 15677171 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Neisseria meningitidis MC58 # 1 275 1 275 275 544 96.0 1e-155 MKLIEQHQIFGGSQQVWAHHAQTLQCEMKFAVYLPDNQENRPLGVIYWLSGLTCTEQNFI TKSGFQRYAAEHQVIVVAPDTSPRGEQVPNDAAYDLGQGAGFYLNATEQPWATNYQMYDY ILNELPRLIEENFPTNGKCSIMGHSMGGHGALVLALRNQERYQSVSAFSPILSPSLVPWG EKAFSAYLGKDCEKWQQYDANSLIQQGYKVQGMRIDQGLEDEFLPTQLRTEDFIETCRAA NQPIDVRFHKGYDHSYYFIASFIGEHIAYHAAFLK >gi|257257240|gb|ACDX02000009.1| GENE 72 71793 - 72929 733 378 aa, chain - ## HITS:1 COG:NMA1518 KEGG:ns NR:ns ## COG: NMA1518 COG1062 # Protein_GI_number: 15794412 # Func_class: C Energy production and conversion # Function: Zn-dependent alcohol dehydrogenases, class III # Organism: Neisseria meningitidis Z2491 # 1 378 1 378 378 728 96.0 0 MEIKQTNSTIKSRAAVAFAPNQPLQIVEIDVEMPRKGEVLIRNTHTGVCHTDAFTLSGSD PEGVFPVVLGHEGAGVVVAVGEGVSSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRE TQGKGLMPDGTTRFSYQGQPIYHYMGCSTFSEYSVVAEVSLAKINPEANHEQVCLLGCGV TTGIGAVHNTAKVQEGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPAKFELAKHFG ATDCLNPNDYDKPIKDVLLDINKWGIDHTFECIGNVNVMRQALESAHRGWGQSIIIGVAG VGQEISTRPFQLVTGRVWKGSAFGGVKGRSELPKMVEDSMKGDIELEPFVTHTLTLDQIN EAFELMHEGKSIRAVIHY >gi|257257240|gb|ACDX02000009.1| GENE 73 73149 - 73631 415 160 aa, chain + ## HITS:1 COG:alr0791 KEGG:ns NR:ns ## COG: alr0791 COG2931 # Protein_GI_number: 17228286 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: RTX toxins and related Ca2+-binding proteins # Organism: Nostoc sp. PCC 7120 # 1 116 629 744 993 100 54.0 9e-22 MSGGDGNDVYHVDNVNDTVTERSAEGTDTIYSSVSYTAAANVENLTLRGSSDINGIGNRS DNILTGNNGNNRLSGEDGNDFLYGMGGNDTLSGGNGSDHLNGGVGDDYIAGGSGSDTIIT GEGKDTVAFTASDIREGSIDRLLDLTLRRTNSTYPVCVHC >gi|257257240|gb|ACDX02000009.1| GENE 74 73616 - 73846 235 76 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|288575919|ref|ZP_05977858.2| ## NR: gi|288575919|ref|ZP_05977858.2| N6-adenine-specific methylase [Neisseria mucosa ATCC 25996] N6-adenine-specific methylase [Neisseria mucosa ATCC 25996] # 17 76 1 60 60 113 100.0 4e-24 MRSLLTGSNANLSWSEMFIDKDPYIDTILKNDRPYLIFDTEQQTLAYRAAGSRSSTVFAK FDSDQELWLSASNIIG >gi|257257240|gb|ACDX02000009.1| GENE 75 74066 - 74563 685 165 aa, chain - ## HITS:1 COG:PM1470 KEGG:ns NR:ns ## COG: PM1470 COG1881 # Protein_GI_number: 15603335 # Func_class: R General function prediction only # Function: Phospholipid-binding protein # Organism: Pasteurella multocida # 1 165 6 170 170 274 80.0 6e-74 MQVTTSAIVNGEFEDKYGKRGSQFSPNNMPTYSIPFEISGAPEGTKSFAVVLEDKDAITA SGFVWTHWLISDLKRTSVAENESLTATDYTQGANSWASLLGKLDIEEATGYGGMYPPNCR HRYELIVYALDTVLNLPRGFRFNDLHFAMQEHILDSASVMGTYDV >gi|257257240|gb|ACDX02000009.1| GENE 76 74670 - 75329 895 219 aa, chain - ## HITS:1 COG:NMB1222 KEGG:ns NR:ns ## COG: NMB1222 COG0692 # Protein_GI_number: 15677095 # Func_class: L Replication, recombination and repair # Function: Uracil DNA glycosylase # Organism: Neisseria meningitidis MC58 # 1 219 1 219 219 338 71.0 6e-93 MQTWHEAIGSEKSEPYFQHIIETVKKERGMGRIIYPPAEDVFNAFRATEFGNVKVVILGQ DPYHGAGQAHGLAFSVREGIAVPPSLVNIYKELADDIEGFHIPQHGYLQHWAEQGVLLLN TVLTVRAGQAHSHATLGWERFTDEVVNQINQNREHVVFMLWGSHAQKKGAFIDRSRHLVL RAPHPSPLSAYRGFFGCKHFSRANAYLQENGITPIDWQV >gi|257257240|gb|ACDX02000009.1| GENE 77 75432 - 77234 2328 600 aa, chain - ## HITS:1 COG:NMA1719 KEGG:ns NR:ns ## COG: NMA1719 COG4232 # Protein_GI_number: 15794612 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol:disulfide interchange protein # Organism: Neisseria meningitidis Z2491 # 1 598 13 612 613 949 77.0 0 MKKLLYFFTAFFALCSSAFAVNADDLLPPEKAFVPQVNVTDKGINVEFKIADGYYMYQSK IVAATAPEGVLAEPVFSKGELKEDEFFGKQTVFHRAAQVNWPYKKAAPTYKLTLTYQGCA EAGVCYPPVDTSFEIKGNGLYKTQSDEPISAKDRFLQPDSAKPAAAAPKAPQNDDGSRFK LSWETLNANLLAFFLAGLGLSFTACMYPLLPIVSSIVVGDKNAGKKRAFALSMVYVQGLA LTYTLVGVIAGLTGALLTVWLQQAWVVLAAAGLMVVLALSMFGLFNIQLPNAVQSYFQNQ SSKLSGGKIASVFVMGILSALIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGV PLILIGTFGGHVLPKAGDWMNGIKYAFGFILLAVAVYLATPHLPYYLVVALYSLLMIVPA IMLLIKSGKQKGRLKTTASVLGFLLIIGGAWFGWQSANKQTTALHHFLTLSPPSEAGKTT DHGKMFTDVAELKAAMDAALKANPDKPVVLDFYADWCIACKEMANYTLNQPQVHEAVDME RFFQIDVTANTPEHQALYKEYGIYGPPGIFAIHADGRRSDPLLGFAKPDEFINWYKQNEK >gi|257257240|gb|ACDX02000009.1| GENE 78 77507 - 78163 1047 218 aa, chain - ## HITS:1 COG:NMA1419 KEGG:ns NR:ns ## COG: NMA1419 COG2197 # Protein_GI_number: 15794331 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Neisseria meningitidis Z2491 # 1 215 1 215 218 346 84.0 2e-95 MTIKIILIDDHTLFRSGIKALLSRQSDFEVIGEAADGLSGVKMAEQLKPDVVLLDLDMPV MNGREALAQILGVNPNQTVIMLTVSEDSDDLTECMRIGARGFLLKNINADFLLDSIRKAV DGDNVFSPEMTTRLVQSLISPSAPRTDQALSTLTPRELEILGYLAAGHSNKVIARHLELA ESTVKVHVQNLLRKLDLSSRVQAAVYAVQHKVPQPEIN >gi|257257240|gb|ACDX02000009.1| GENE 79 78160 - 79953 1774 597 aa, chain - ## HITS:1 COG:NMA1418 KEGG:ns NR:ns ## COG: NMA1418 COG3850 # Protein_GI_number: 15794330 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase, nitrate/nitrite-specific # Organism: Neisseria meningitidis Z2491 # 1 589 1 583 590 629 59.0 1e-180 MSFTFRFLNHLSLSSRLKLLTVLWVSSALLSVILTLVLSWRLQNAATVIEDAGNLRTQVY RLAYMVGEHAPRAQINNQIREFEQNLNRISQSNAIHPLMPSETPPAYDLIQSALIEDWKS NIQPVLRRYERPDQIKLYRFAANIELFLQAMEHANEKNTLWLRRFQMIMMGMIFAAAGLM IIWHYAWIIRPLETLRDGVKTISQGRFGVQIDTDQISEFAQVNKGFNQMSSRLKTLYTDL EGQVARQTQDLARQNRDLTLLYQTTRDLHQTFTPQQAAEEFLKRTLPAVSAEAGSIRLWD NERKRTDIVASIGLPDDSDEPDTAPDKTALKHAVFPISYQEEELGVLNLYFSDDLKPDNN DNELLRTLSGQLGVSIVNSRLEQERRLLAVLQERNLIAQGLHDSIAQALTFLNLQVQMLE SAFYSNQKEQAEENIRFIKDGVQECYEDVRELLLNFRTKISNKDFPEAVSALLTRFERQT KINVSTEWRDEGAALNNDEQLQIIFILQESLSNIRKHALAHNVTVSIDNRQDFTLIIRDD GVGFDPAHLDTLSGEHVGMGIMRERAQRIHAELEVSSKPDEGTTVTLTLPKHKRTFS >gi|257257240|gb|ACDX02000009.1| GENE 80 80196 - 80756 295 186 aa, chain + ## HITS:1 COG:NMA1417 KEGG:ns NR:ns ## COG: NMA1417 COG0746 # Protein_GI_number: 15794329 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin-guanine dinucleotide biosynthesis protein A # Organism: Neisseria meningitidis Z2491 # 1 177 1 180 192 271 70.0 6e-73 MKIFALILSGGQSDGVDKGLSPWQGKTLIDCVIDRIKPQVDHIAISSNRNLESYALRSPH LLPDARQWRYLGGLAALCTAANDLQIASADWLLVVPCDMPDLPEDLVERFRTVSKKTPLC NAFYIETPVTPHYNVMFIRPQILQSAVPYLSSGLRTVRGWLQQQRARVLQFDHDDCFIRY GKSNNA >gi|257257240|gb|ACDX02000009.1| GENE 81 80884 - 83394 1135 836 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15894003|ref|NP_347352.1| fused ribonuclease/ribosomal protein S1 [Clostridium acetobutylicum ATCC 824] # 36 742 4 719 730 441 36 1e-123 MSTNKMNKNIKSLNLREKDPFLKREKQRYEHPLPSREWIIELLEQKGVPSKIEVLARELS ITEEEYEFFERRLKAMARDGQVLINRRGAVCAADKLDLVKCRVEAHKDGFGFAVPLTPTK DGDFVLYERQMRGIMHGDIVTVRPAGIDRKGRREGTVLDIVERAQSKVVGRFYMDRGVAI LEAEDKRLNQSIVLEPDSVAYFKPESGQVIVGEIETYPEQNRPAVAKIIEVLGDYADSGM EIEIAVRKHHLPHQFSEACAKAAKKIPDHVRKSDLKGRVDLRDLPLVTIDGETARDFDDA VFAEKIGRNYRLVVAIADVSHYVRPDDAIDTDAQERSTSVYFPRRVIPMLPENLSNGICS LNPDVERLCMVCDMVITYAGNIKEYRFYPAVMRSHARLTYNQVWDWISDDLDHPHKAQID TLYKLFKILQKKRFERGAVEFESVETQMLFDDNGKIEKIVPVVRNDAHKLIEECMLAANV CAAEFLMKNKHTALFRNHLGPTPEKLATLREQLGLLGLQLGGGDNPTPKDYAALAEQFKG RPDAELLQVMMLRSMQQAVYEPHCDGHFGLAYEAYAHFTSPIRRYPDLTVHRAIKAVLNQ QTYTPNKSWQALGVHTSFCERRADDASRDVENWLKTYYMRDKVGEIFEGKISGMTNFGLF VTLDGIHIDGLVHISDLGEDYFNFRPEIMAIEGERSGIRFNMGDKVSVRVARADLDTSKI DLTLISGGTSGKKRRTQTTASTGSKTKRKLTAKEIDDAMKTPVKQERPAAKRRSKAQPAN APATSSENGKKKTAKAKPAAEKAKRKDKKPSKSVKIKLKTPDTATTKRKGRSKANG >gi|257257240|gb|ACDX02000009.1| GENE 82 84383 - 85702 2048 439 aa, chain - ## HITS:1 COG:NMA1490 KEGG:ns NR:ns ## COG: NMA1490 COG1960 # Protein_GI_number: 15794390 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Neisseria meningitidis Z2491 # 1 439 79 517 517 839 93.0 0 MQYLPEDKWLALKQAGLLLPFLDKKHGGRKGSQFEIQEVLRIAGHYGVPVTLRTGIEGAL VLQPLQEFGDEAQIAQGLEMIFKGEGGGLGITEPETSGAAIAREMQSYYEYTDDQTIYVN ATKYWQGNSQSDFLLVAAKERKNGKLSKVINLLLVPKEYIRYEALTSEGLRAVRYAVNRI DAEMPSAAVMKLSQSDAAGLRAFQNIFIRSRLQLIGMTHGIMEYILENLNQYIRNDIKFV DYERREIQRRYQISEILYRYVCHSVSPVAPIAHQLMEANIIKTLATEYTYAAAQMLQKLL GAKGFERGHTASNIAIDIRPFTIFEGPNDMLYAEIYDQFVRATAEEKEAGIKLDKNQTLL DRLQTDARFAAVARDYTLPEDIRSFLQEHTLTDACALQKVFIGKIIARLFVFVQAENEDT AAFLLNDIRKDILDCRYCG >gi|257257240|gb|ACDX02000009.1| GENE 83 85999 - 86691 1120 230 aa, chain + ## HITS:1 COG:CC0717 KEGG:ns NR:ns ## COG: CC0717 COG1814 # Protein_GI_number: 16124970 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Caulobacter vibrioides # 5 230 7 233 233 176 54.0 4e-44 MYSQHSERHFSNRNNWLRASVLGANDGLISTASLLTGVAAAAPDFQTLLLTGVSALIGGA VSMAAGEYVSVSSQSDTEKADLHKERYELEANPDAELAELTEIYRRRGLSDALAAEVAQA LMEHDALSAHARDEIGITETSAAKPMQAALASAGSFCAGAILPLLVALTAPTALIPTLAA TTLCGLAALGYASAKLGGAPVAPAVLRVCLWGVAALAVTGLIGKLAGVAV >gi|257257240|gb|ACDX02000009.1| GENE 84 86943 - 91253 5114 1436 aa, chain - ## HITS:1 COG:HI1357 KEGG:ns NR:ns ## COG: HI1357 COG0296 # Protein_GI_number: 16273267 # Func_class: G Carbohydrate transport and metabolism # Function: 1,4-alpha-glucan branching enzyme # Organism: Haemophilus influenzae # 701 1417 5 725 730 989 64.0 0 MSEHLEEQALGLGIDLGFHDIGGIYHETKPEVLEAIVGALQQDGFSDDLYADTLVAHENG RESLRLPSEFHGAAEICLEDEAGERQVLALNRGEDGLLWVALPALACGYYTLSAEVKGSV CKVRLVVAPQSVYQPKMLERGLRMNGLTTHLYSLRSQRNWGIGDFTDLLDLMAFAADKQL DFVGINPLHALFSAKPAFASPYSPSSREWLNPIYLDVEKVGAFSYNEKLKNWLKQPNICQ RIAALRITETVAYTAVWAFKRDALQKAFDAFENDKCEAAEQERAAFDAFVEERGEALEGF GLFEALDQYYNRSGEVGWLSWPSEFHDPHGEAVQRFAQGHRREIRFYMWLQWLCAEQLRE VNEAAAARGVKLGIYGDLAVGVARGSADTWLNRADYCMDMAVGAPPDPFSPTGQNWDLPP LNPMMLKHTGYEKFVRLLRENMRLYGILRIDHVMALCRLWWVAGETADFGAYVHYDADVM FAILALESRRNQCVVIGEDLGTVPDQARYLLNRYQVFSYKVVYFSKGWHGFELPEEYPEQ AITVVSTHDVAPLVGYWTGKDLDLMFRLGTIPDAETFQTTLEAREHDKADLFDKLRHTGC LPSDAEMSSETDETLLTALHKYAAMSRSKLYAVQLENLLGMSDNLNVPGVAEGYPNWARK MPVALEDFPHNRLMGGQLAMIGEVRMKKNSRMKPYHELDQVERDTVESLFLATHSDLFAY LGRHRLAEGDEVVRTLIPNASGVDIVNRESGELITSSEKVDERGFFVAVLPEGAPDYALN VRYAEDAEPVREEDPYRFGSALKDMDSWLLAEGKHLRPYETLGAHFAEVDGVKGVSFAVW APNAQRVSVIGEFNHWDGRRHVMRFHRDNGIWDIFIPAVKLNALYKFEIRDANGDVRQKT DPYAFGAELRPNTASVVRGLPEKVEAPDFRARANAIDAPISIYEVHLGSWKRNPENNFWL TYEQLAKELVAYVKDMGFTHIEFLPVSEYPFDGSWGYQATGLYAPTSRFGSPDELRALIK AAHDAGIGVILDWVVGHFPTDDHGLAKFDGTALYEHADPREGYHQDWNTLIYNFGRNEVK NFLQGNALYWIERFGFDGIRVDAVASMIYRNYSRKDGEWIPNQYGGHENLEAIAFLRDTN TMLKEVVPSATEIAEESTSFANVTRQEGLNFSYKWNMGWMNDTLRYMMEDPINRKYHHNK MTFGMMYQYSENFVLPLSHDEVVHGKRSLLGRMPGDCWQQFANLRAYYGFMYGFPGKKLL FMGNEFAQGREWNYNEGLDWFLLDQEGGWHKGVQNFVRDLNYVYKDTAPLYQLDQWPEGF EWLVADDGNNSVFVFERRDREGNRVIVISNFTPVVHDSYRFGVNEAGEYREILNSDDLGY NGSGVSAGQTLQTEEIWSHGKPNSLAVKVPPLATVYLYKTAEPSATESADQAEGEA >gi|257257240|gb|ACDX02000009.1| GENE 85 91550 - 92029 661 159 aa, chain - ## HITS:1 COG:NMA1722 KEGG:ns NR:ns ## COG: NMA1722 COG1047 # Protein_GI_number: 15794615 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerases 2 # Organism: Neisseria meningitidis Z2491 # 1 147 1 147 160 237 89.0 7e-63 MAIKKNSVVSLHYEMYDADNQLLDKTEEPIAYLHGGYDGIFPLVEEALHEKNVGDTVEVA LSPDDAFGEQDPGLVRIEDVSVFPVEVEVGMMFEADDPETGDVLVYRVTDVADGKAVVDG NHPLAGMKILFKATVDGVRDATEEEIAHGHVHGPHGHHH >gi|257257240|gb|ACDX02000009.1| GENE 86 92602 - 92880 509 92 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKSLIAAALFSLALAACGDKAADTAASAASEAASAATEAASAATEAASAATEAAAPATE AAATEAASAATEAASAATEAASAATEAASAAK >gi|257257240|gb|ACDX02000009.1| GENE 87 93016 - 94383 1780 455 aa, chain + ## HITS:1 COG:NMA1724 KEGG:ns NR:ns ## COG: NMA1724 COG0277 # Protein_GI_number: 15794617 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Neisseria meningitidis Z2491 # 1 455 1 455 455 716 74.0 0 MPNLYDRFLEFLSPAEILEATPALLNDQRRRFVSEPDIILQPHSIENVQKIMRFCFEHRI PVTPQGGNTGLCGAAVASSGVLLNLSKINRIREINLADNSITVEAGVILQNVQKAAAEAG RLFPLSLASEGSCEIGGNIACNAGGLNVLRYGSMRDLVLGLEVVLPNGELVSHLQPLHKN TTGYDLRHLFIGSEGTLGIITAATLKLFARPKTIATTWVGLDDIESAVQLLTAVQGHFAE RLTSFELISRYALALSSEFSHLKQPTDANWHVLLELTDSVPDAALDEKLAEFLYQNGQEN SIIAQSEQERLDLWTLRENISASQRKLGTSIKHDIAVPIAQVATFVRQCAPALEARFPGI QIVCFGHLGDGSLHYNTFLPDVLSNDAYRYEDAVNTIVYEHILACHGTIAAEHGIGTIKK HWLPSVRTPSEIALMRAIKAQLDPHDIMNPGKLLP >gi|257257240|gb|ACDX02000009.1| GENE 88 94523 - 95509 1414 328 aa, chain + ## HITS:1 COG:RSc1998 KEGG:ns NR:ns ## COG: RSc1998 COG0039 # Protein_GI_number: 17546717 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Ralstonia solanacearum # 4 328 3 328 329 429 66.0 1e-120 MTLKPPVRIAVTGAAGQIAYATLFRIAGGIMLGRDQPVILQLLDLPQAQQALRGVIMEMQ DCAFPLLDDIFATDDPEVAFKDADIALLIGARPRTQGMERADLLHANAEIFKVQGAALNK VANRNVKVLVVGNPANTNAYIAMKSAPDIPPENFTALMRLDHHRAVSQVAEKINRPIPSI EQMCVWGNHSPTMYADYRYATSNGESVQDMITEPNWNTEVFMPKIAGRGAAIIAARGSSS AASAANAAIYHLRDWLLGSSGKWITMGVPSDGSYGIPEGLVFGFPVVCDEGSYRIVQGLD LSDEFSRQRIAATLAELEEERAAIQDML >gi|257257240|gb|ACDX02000009.1| GENE 89 95576 - 96748 1572 390 aa, chain + ## HITS:1 COG:slr1870 KEGG:ns NR:ns ## COG: slr1870 COG1432 # Protein_GI_number: 16330259 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Synechocystis # 5 237 4 241 249 203 47.0 6e-52 MTTLANKKLAVLIDADNAPADIIDRLLEEVAKYGIASVKRIYGDWSHGLSKWKAALLPHA IIPVQQFAYTKGKNATDMALVIDAMDLLYSGNFDGFCIVSSDSDFTRLASRLRESGLTVY GFGEKKTPEAFRKACDKFIYTEIFRPEKQRQEKEKNNGKNNPAAAPDALSLLKRAVRENA DDLGWANLGPIGSYISKINPDFDSRLYGYGKLSDLIKSFDIFEHRTDNNQLQVRRRKSAD KPTERSSETPVATHQAEETVSDDPNAAQKRKTRGKKTNPVKNEHAQSNPTADTAQPTPAK PEPAAKSSKLPVTRVIPAVQQAVDTHADEQGWARLSDVSKQLTAEGTDPQQYGFETIRHL IHAIYTDWLEIKKAGRGERLRINKRFTIKG >gi|257257240|gb|ACDX02000009.1| GENE 90 96857 - 97207 294 116 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148984739|ref|ZP_01818007.1| IS630-Spn1, transposase Orf1 [Streptococcus pneumoniae SP3-BS71] # 1 116 1 116 116 117 44 2e-25 MAYSIDFRQKALDHYEQHGNISQTARTFRITNRTLYQWIALKKETGSLQHRTKGGNSERI DKEELRRYVAEHPDAYQYEIAQHLGCTASNVGYLLKTLKITRKKRQPSTKNKTSKK >gi|257257240|gb|ACDX02000009.1| GENE 91 97243 - 97701 304 152 aa, chain + ## HITS:1 COG:SP0016 KEGG:ns NR:ns ## COG: SP0016 COG3335 # Protein_GI_number: 15899965 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 42 147 1 106 112 134 58.0 5e-32 MPKVYLDETGFDTFYYRPYAYALRGQIVKARISGKRYERMSLVAARGDRELVAPMIYKGT MDSSLFEAWFGQFLLKELKEPSVIIMDNARFHRMAVLREMAQRAGHIILPLPPYSPELNP IEKVWANIKRHLRKVMSGCLPFEQALLGILFV Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:00:55 2011 Seq name: gi|257257238|gb|ACDX02000010.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont9.1, whole genome shotgun sequence Length of sequence - 88872 bp Number of predicted genes - 75, with homology - 74 Number of transcription units - 52, operones - 19 average op.length - 2.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 71 - 541 275 ## NMO_0943 putative phage associated type II DNA-methyltransferase (EC:2.1.1.72) + Term 549 - 577 1.0 - Term 582 - 618 1.7 2 2 Op 1 . - CDS 715 - 1746 1734 ## COG2255 Holliday junction resolvasome, helicase subunit 3 2 Op 2 . - CDS 1818 - 2126 511 ## NMA1411 hypothetical protein 4 2 Op 3 . - CDS 2190 - 2495 103 ## gi|255065915|ref|ZP_05317770.1| conserved hypothetical protein - Prom 2519 - 2578 4.0 - Term 2515 - 2582 19.2 5 3 Op 1 . - CDS 2586 - 2939 281 ## Mmwyl1_3361 hypothetical protein - Prom 3007 - 3066 5.7 - Term 2957 - 3021 7.9 6 3 Op 2 . - CDS 3188 - 4444 1803 ## COG0617 tRNA nucleotidyltransferase/poly(A) polymerase - Prom 4553 - 4612 2.4 7 4 Op 1 . - CDS 4617 - 5576 1366 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs 8 4 Op 2 . - CDS 5616 - 6023 461 ## NMC1115 hypothetical protein - Prom 6057 - 6116 4.2 9 5 Tu 1 . - CDS 6167 - 7477 2092 ## COG4487 Uncharacterized protein conserved in bacteria - Prom 7501 - 7560 5.0 10 6 Tu 1 . - CDS 7608 - 9377 2093 ## COG4178 ABC-type uncharacterized transport system, permease and ATPase components - Prom 9440 - 9499 6.7 + Prom 9461 - 9520 8.1 11 7 Tu 1 . + CDS 9628 - 11829 2146 ## COG1629 Outer membrane receptor proteins, mostly Fe transport + Term 11860 - 11910 14.4 - Term 11950 - 12001 5.8 12 8 Tu 1 . - CDS 12027 - 12311 221 ## PROTEIN SUPPORTED gi|56478165|ref|YP_159754.1| RNA-binding protein - Prom 12410 - 12469 3.3 + Prom 12267 - 12326 4.0 13 9 Op 1 13/0.000 + CDS 12420 - 13040 551 ## COG0293 23S rRNA methylase 14 9 Op 2 . + CDS 13105 - 15060 1574 ## PROTEIN SUPPORTED gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 + Term 15066 - 15109 11.0 15 10 Tu 1 . - CDS 15509 - 16459 710 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 - Prom 16581 - 16640 6.1 - Term 16613 - 16650 8.0 16 11 Tu 1 . - CDS 16737 - 17738 1523 ## COG0113 Delta-aminolevulinic acid dehydratase - Prom 17831 - 17890 3.1 - Term 17772 - 17825 9.2 17 12 Op 1 . - CDS 17892 - 18617 901 ## COG3210 Large exoproteins involved in heme utilization or adhesion - Prom 18637 - 18696 3.9 18 12 Op 2 . - CDS 18758 - 19060 310 ## gi|261365010|ref|ZP_05977893.1| conserved hypothetical protein - Prom 19103 - 19162 5.9 + Prom 19087 - 19146 3.7 19 13 Tu 1 . + CDS 19208 - 20749 1463 ## COG0477 Permeases of the major facilitator superfamily + Term 20765 - 20814 13.6 - Term 20996 - 21039 11.0 20 14 Op 1 . - CDS 21043 - 22596 1890 ## COG5339 Uncharacterized protein conserved in bacteria - Prom 22619 - 22678 3.4 21 14 Op 2 . - CDS 22883 - 24292 1846 ## COG0477 Permeases of the major facilitator superfamily - Prom 24519 - 24578 6.7 + Prom 24497 - 24556 10.0 22 15 Op 1 5/0.048 + CDS 24720 - 25499 906 ## COG0247 Fe-S oxidoreductase 23 15 Op 2 13/0.000 + CDS 25496 - 26197 905 ## COG1556 Uncharacterized conserved protein 24 15 Op 3 . + CDS 26194 - 27648 1612 ## COG1139 Uncharacterized conserved protein containing a ferredoxin-like domain + Term 27681 - 27712 -1.0 + Prom 27796 - 27855 5.3 25 16 Tu 1 . + CDS 27953 - 29812 2891 ## COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase + Term 29827 - 29867 6.4 + Prom 29941 - 30000 2.2 26 17 Op 1 2/0.238 + CDS 30072 - 30551 718 ## COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 27 17 Op 2 2/0.238 + CDS 30622 - 31293 968 ## COG0120 Ribose 5-phosphate isomerase + Term 31311 - 31358 14.2 28 17 Op 3 . + CDS 31378 - 32085 789 ## COG1525 Micrococcal nuclease (thermonuclease) homologs + Term 32097 - 32147 19.4 - Term 32089 - 32131 12.8 29 18 Tu 1 . - CDS 32153 - 33988 2624 ## COG0322 Nuclease subunit of the excinuclease complex - Prom 34042 - 34101 5.2 - Term 34045 - 34115 23.1 30 19 Op 1 . - CDS 34127 - 34447 387 ## NGK_1304 hypothetical protein 31 19 Op 2 . - CDS 34527 - 35465 929 ## NMA0696 hypothetical protein - Prom 35498 - 35557 2.4 - Term 35818 - 35852 -0.8 32 20 Op 1 . - CDS 35963 - 36646 977 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 33 20 Op 2 . - CDS 36687 - 37805 1226 ## COG2890 Methylase of polypeptide chain release factors - Prom 37830 - 37889 4.2 + Prom 37925 - 37984 3.6 34 21 Tu 1 . + CDS 38014 - 39228 1812 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase + Term 39246 - 39292 5.2 35 22 Op 1 . - CDS 39642 - 40889 681 ## COG0582 Integrase 36 22 Op 2 . - CDS 40859 - 41047 245 ## gi|255065621|ref|ZP_05317476.1| putative phage excisionase - Prom 41156 - 41215 4.3 37 23 Op 1 5/0.048 - CDS 42475 - 43170 633 ## COG3039 Transposase and inactivated derivatives, IS5 family 38 23 Op 2 . - CDS 43113 - 43481 399 ## COG3039 Transposase and inactivated derivatives, IS5 family + Prom 43697 - 43756 6.7 39 24 Tu 1 . + CDS 43792 - 43959 116 ## gi|288575946|ref|ZP_05977914.2| phytoene dehydrogenase - Term 43870 - 43920 6.5 40 25 Op 1 . - CDS 44037 - 44357 431 ## COG3293 Transposase and inactivated derivatives 41 25 Op 2 . - CDS 44330 - 44830 340 ## MAE_18060 transposase 42 25 Op 3 1/0.238 - CDS 44848 - 46146 994 ## COG0457 FOG: TPR repeat - Prom 46246 - 46305 3.2 - Term 46251 - 46301 14.4 43 26 Tu 1 . - CDS 46318 - 47136 704 ## COG1793 ATP-dependent DNA ligase - Prom 47170 - 47229 2.8 + Prom 47123 - 47182 4.8 44 27 Tu 1 . + CDS 47254 - 47886 978 ## COG0491 Zn-dependent hydrolases, including glyoxylases + Term 47903 - 47948 8.1 + Prom 47937 - 47996 3.5 45 28 Op 1 . + CDS 48223 - 48753 848 ## COG2913 Small protein A (tmRNA-binding) 46 28 Op 2 . + CDS 48763 - 49194 681 ## NMC0324 putative periplasmic protein + Term 49228 - 49278 15.2 - Term 49932 - 49985 14.5 47 29 Tu 1 . - CDS 50004 - 52025 2305 ## COG1297 Predicted membrane protein - Prom 52125 - 52184 1.7 + Prom 52180 - 52239 5.1 48 30 Op 1 . + CDS 52270 - 54324 3314 ## COG0143 Methionyl-tRNA synthetase + Term 54334 - 54373 9.3 49 30 Op 2 1/0.238 + CDS 54382 - 54846 634 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Term 55000 - 55036 4.0 + Prom 54917 - 54976 5.1 50 31 Tu 1 . + CDS 55050 - 56303 2033 ## COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase + Term 56321 - 56372 18.0 + Prom 56343 - 56402 3.9 51 32 Tu 1 . + CDS 56429 - 57532 1738 ## COG1186 Protein chain release factor B + Term 57544 - 57606 19.4 - Term 57617 - 57655 4.2 52 33 Tu 1 . - CDS 57775 - 58692 792 ## COG1307 Uncharacterized protein conserved in bacteria - Prom 58764 - 58823 6.3 + Prom 58819 - 58878 4.4 53 34 Tu 1 . + CDS 58902 - 59387 557 ## COG0262 Dihydrofolate reductase + Term 59422 - 59471 12.2 - Term 59408 - 59457 12.2 54 35 Tu 1 . - CDS 59482 - 60894 1968 ## COG2067 Long-chain fatty acid transport protein - Term 61212 - 61263 18.0 55 36 Op 1 19/0.000 - CDS 61300 - 61758 780 ## COG1781 Aspartate carbamoyltransferase, regulatory subunit 56 36 Op 2 . - CDS 61768 - 62688 1488 ## COG0540 Aspartate carbamoyltransferase, catalytic chain + Prom 62948 - 63007 4.5 57 37 Tu 1 . + CDS 63178 - 65325 3201 ## COG1289 Predicted membrane protein + Term 65362 - 65405 10.4 + Prom 65351 - 65410 1.5 58 38 Tu 1 . + CDS 65539 - 66510 1003 ## COG3547 Transposase and inactivated derivatives 59 39 Tu 1 . - CDS 66578 - 66862 255 ## NMC0454 hypothetical protein - Prom 67046 - 67105 3.3 - Term 67037 - 67080 0.4 60 40 Tu 1 . - CDS 67222 - 68223 1396 ## COG4143 ABC-type thiamine transport system, periplasmic component - Prom 68249 - 68308 3.9 + Prom 68196 - 68255 5.8 61 41 Op 1 . + CDS 68286 - 68942 1023 ## COG1011 Predicted hydrolase (HAD superfamily) 62 41 Op 2 . + CDS 69005 - 69295 598 ## NMC0016 hypothetical protein 63 42 Tu 1 . + CDS 69402 - 69593 269 ## + Term 69678 - 69720 -0.8 64 43 Tu 1 . + CDS 69812 - 71185 2398 ## COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) + Term 71305 - 71347 -0.8 - Term 71683 - 71725 -0.1 65 44 Tu 1 . - CDS 71956 - 72999 1098 ## COG2070 Dioxygenases related to 2-nitropropane dioxygenase - Prom 73081 - 73140 2.8 - Term 73210 - 73268 16.1 66 45 Tu 1 . - CDS 73298 - 79882 8218 ## COG5295 Autotransporter adhesin - Prom 79909 - 79968 4.1 + Prom 80526 - 80585 5.5 67 46 Tu 1 . + CDS 80609 - 80857 430 ## COG5007 Predicted transcriptional regulator, BolA superfamily + Term 80879 - 80926 9.9 - Term 80866 - 80914 10.1 68 47 Tu 1 9/0.048 - CDS 80976 - 82247 1951 ## COG2837 Predicted iron-dependent peroxidase - Term 82420 - 82471 14.7 69 48 Op 1 7/0.048 - CDS 82486 - 83658 2055 ## COG2822 Predicted periplasmic lipoprotein involved in iron transport 70 48 Op 2 . - CDS 83713 - 84549 870 ## COG0672 High-affinity Fe2+/Pb2+ permease - Prom 84686 - 84745 9.8 71 49 Tu 1 . + CDS 85047 - 86369 2125 ## COG2821 Membrane-bound lytic murein transglycosylase + Term 86390 - 86431 10.6 - Term 86553 - 86607 20.5 72 50 Op 1 2/0.238 - CDS 86799 - 87263 530 ## COG2954 Uncharacterized protein conserved in bacteria 73 50 Op 2 . - CDS 87318 - 87743 342 ## COG1981 Predicted membrane protein - Prom 87846 - 87905 4.4 + Prom 87850 - 87909 7.9 74 51 Tu 1 . + CDS 87965 - 88282 233 ## gi|255068621|ref|ZP_05320476.1| conserved hypothetical protein 75 52 Tu 1 . + CDS 88545 - 88872 388 ## COG3547 Transposase and inactivated derivatives Predicted protein(s) >gi|257257238|gb|ACDX02000010.1| GENE 1 71 - 541 275 156 aa, chain + ## HITS:1 COG:no KEGG:NMO_0943 NR:ns ## KEGG: NMO_0943 # Name: not_defined # Def: putative phage associated type II DNA-methyltransferase (EC:2.1.1.72) # Organism: N.meningitidis_alpha14 # Pathway: Mismatch repair [PATH:nmi03430] # 1 156 104 259 259 295 88.0 3e-79 MTDIQRAARFFYLQHNAFGGKTVHQYFGTATTSKAWDASQVEAKLKAAKDRLKGVYIENE SWERCFKRYDREHTFFYADPPYWQTAGYDSAFDWSQYELLAKAMSESKGKVMLSINDHPD IRALFKDFRITQLELTYTVGRDKSGKTSGELVICNW >gi|257257238|gb|ACDX02000010.1| GENE 2 715 - 1746 1734 343 aa, chain - ## HITS:1 COG:NMB1243 KEGG:ns NR:ns ## COG: NMB1243 COG2255 # Protein_GI_number: 15677115 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, helicase subunit # Organism: Neisseria meningitidis MC58 # 1 343 1 343 343 608 92.0 1e-174 MLQTDNLTAAQPQRIITAQSISSQEELLERALRPKTLDDYIGQDKAKEQLAIFIQAAKKR GEALDHTLLFGPPGLGKTTLAHIIAKELGVNLRQTSGPVLERAGDLAALLTNLEPHDVLF IDEIHRLSPVVEEILYPALEDYQLDIMIGEGPAARSVKIDLPPFTLVGATTRAGMLTNPL RDRFGIVARLEFYQNQDLATIVSRSAQLLQLDMGDEGAMEVAKRSRGTPRIANRLLRRVR DFADVKNNGVIDAAVADAALSMLDVDAQGLDVMDRKFLEAILHKFSGGPVGLDNVAAAIG ESTDTIEDVIEPYLIQQGFLQRTPRGRMATERAYLHFGLKMEK >gi|257257238|gb|ACDX02000010.1| GENE 3 1818 - 2126 511 102 aa, chain - ## HITS:1 COG:no KEGG:NMA1411 NR:ns ## KEGG: NMA1411 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_A # Pathway: not_defined # 1 102 1 102 102 200 95.0 2e-50 MTIQTDLLPKINNEDYQRLILKHSVEFSEGEIRLLNEILEKFSFDVVQAQALAQAVMQQV RFDPNAYHIDSDDEDTTGICPHCINPPMPPLRDYLVWRETRG >gi|257257238|gb|ACDX02000010.1| GENE 4 2190 - 2495 103 101 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|255065915|ref|ZP_05317770.1| ## NR: gi|255065915|ref|ZP_05317770.1| conserved hypothetical protein [Neisseria sicca ATCC 29256] conserved hypothetical protein [Neisseria sicca ATCC 29256] # 1 101 112 212 212 206 97.0 6e-52 MSEISEWQFRDNIPKAPVARVREAEYPNKNYYQNGIKQPKNDIPNILRIQKCKQGAWSFD YQEKTILIGDFFDSRDAQIINTELNRFIPASAKARQLSDDL >gi|257257238|gb|ACDX02000010.1| GENE 5 2586 - 2939 281 117 aa, chain - ## HITS:1 COG:no KEGG:Mmwyl1_3361 NR:ns ## KEGG: Mmwyl1_3361 # Name: not_defined # Def: hypothetical protein # Organism: Marinomonas_MWYL1 # Pathway: not_defined # 1 101 4 104 111 62 35.0 4e-09 MQKQFDLLNNICSIFFSAPEKFNLLEYEYKFNPEEAWVGTKLITKLDGNPVQITLSEQNE DKLMDLCQELHDEMQAHTGGDWRKFILTINESGEANTKFIYEIQSVLDELEDEDYFA >gi|257257238|gb|ACDX02000010.1| GENE 6 3188 - 4444 1803 418 aa, chain - ## HITS:1 COG:NMA1410 KEGG:ns NR:ns ## COG: NMA1410 COG0617 # Protein_GI_number: 15794322 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA nucleotidyltransferase/poly(A) polymerase # Organism: Neisseria meningitidis Z2491 # 8 418 1 411 417 753 91.0 0 MTQKTHTIKTYLVGGAVRDYLLGLPVKDRDWVVVGADAQTMLAQGFQPVGKDFPVFLHPD THEEYALARTERKTAKGYAGFSFHADKDVTLEQDLMRRDLTINAMARDSDNLIIDPFGGQ QDLVAGILRHVSPAFAEDPVRILRTARFAARYGFEIAEETIKLMRQMVENGEADALVAER VWQELAKGLMEKNPRRMIEVLRECGALKVLLPEVDALFGVPQRADYHPEIDSGIHTLMTL QRTADMGLSLPERYAALLHDLGKAKTPPDILPKHHGHDLAGVEPVRKINQRLRAPKHCAE LAELVCRWHIMFHQVEQFKNKTILTVLKKTDAFRRPERFGAALNVCIADTQGRLNRENTP YPQRAHWLALLEAANQVDAGKIAAECRAQGKAHLIAEEIDRERLAQIAPLQKAYKAEK >gi|257257238|gb|ACDX02000010.1| GENE 7 4617 - 5576 1366 319 aa, chain - ## HITS:1 COG:NMA1382 KEGG:ns NR:ns ## COG: NMA1382 COG0330 # Protein_GI_number: 15794303 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Neisseria meningitidis Z2491 # 7 319 3 315 315 506 88.0 1e-143 MEFLYSFPVILLIVVVIFGFKSFIVVPQQEVYVVERLGRFHNALTAGLNILIPFVDRVAY RHSLKEVPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGSSNYIMAITQLAQTTLR SVIGRMELDKTFEERDEINSIVVSALDEAAGAWGVKVLRYEIKDLVPPQEILRSMQAQIT AEREKRARIAESEGRKIEQINLASGQREAEIQQSEGEAQAAINASNGEKIARINRAQGEA EALRLVAEANADAIRKIAEAVRAEGGSEAVNLKVAEQYVEAFSNLAKESTTLIMPANVAD IGSLVSAGLKIVDGNKAAK >gi|257257238|gb|ACDX02000010.1| GENE 8 5616 - 6023 461 135 aa, chain - ## HITS:1 COG:no KEGG:NMC1115 NR:ns ## KEGG: NMC1115 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 132 5 136 139 121 53.0 1e-26 MTAWFIAAAAVLIVELFVGTVYLLVVSAALFGAGLVYWLTGDTSIAVAAAAVLSAAGIWV VHGKFKKTAPRQELNDDLDIRQTVHILRRLHGDCYEVSYRGTRWQAQAENADAVQTTSTA VITGKNGNVLLIRLN >gi|257257238|gb|ACDX02000010.1| GENE 9 6167 - 7477 2092 436 aa, chain - ## HITS:1 COG:SP1213 KEGG:ns NR:ns ## COG: SP1213 COG4487 # Protein_GI_number: 15901076 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 1 432 1 422 424 367 56.0 1e-101 MHEIKCPHCHTAFTVNEASYADILNQVRTQEFQTEIHERLQQAQMQFQSDMQLAQAQAQN QFDKILADKNHEIAALSNQINAYEKDSKLAAAEIEGRLKAQIAEQDKLIAELKAQAKSLE TAKNMEKELEITKAVAEKERELGNLNTQLMLQSKENQLEKQSLREKYEAELKQKDETIAF YKDFKARQSTKMIGESLEQHCETEFNRIRTTAFPQAVFGKDNDAKTGSKGDYIYRETDEE GNEIISIMFEMKNENDETATKKKNEHFFKELDKDRKEKNCEYAVLVSLLEADSDLYNNGI VDVSYAYPKMYVVRPQFFIPIVSLLRNAALNSLKYKQELAQMRAQNIDITHFEEDLDKFK TDFARNYELASRKFQTAIDEIDKTISHLQKTKEALLSSENNLRLANNKATDLTVKKLVRK NPTMKAAFAALEKKED >gi|257257238|gb|ACDX02000010.1| GENE 10 7608 - 9377 2093 589 aa, chain - ## HITS:1 COG:HI1467 KEGG:ns NR:ns ## COG: HI1467 COG4178 # Protein_GI_number: 16273371 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease and ATPase components # Organism: Haemophilus influenzae # 4 583 3 583 589 594 49.0 1e-169 MQKWQIELYSTPSWLLQTLLMVAAASAVILFLARNTRFGREFSYILRLCLTPKSTIKVLL LITAMITLLLTEVRLNVLSTFMSKGLYDSMQDLNASAFWMFAAMNAGVVLVRAFNNVVND FLDQGLAIKWSERLNEVLTTRWLADKNYYRLQMRRHAPDNIDQRIQQDAQDFIASTIEFV RGMVNSVVTSLEFAVVLWGLAGILTVFGFDIPHGIVWFVYMFVILATFIAMWIGNPLIRY NYENEKLNGDYRYSLIRVRDHAESVAFYSGEQHEHDQLTDRFKAIIRNRWRIARQSVCLS GFNDMFTNGIKLFPIILQAPRLFAGQIKIGDIQQTVQAFARLQNALSFFRMFYNKFTAYR ARLERLYGFLLSTEEQHSAQQPDITEVSDDLSLENVALFRHNGEILLSDINVNLKSGDSL LIRGPSGCGKTSLLRALAGLWPFGSSGKVSRPPHRDILFLPQRPYTAQGSLRDAICYPNI DKQHPELVEAMNTCRLGYLVDKLDKPDDWQHKLSPGELQRIAFVRALLSQPKVILLDEAT AALDEPTEALLYRALKRKLPQSIIISIGHRGTLNEFHDFRLDVGNVACD >gi|257257238|gb|ACDX02000010.1| GENE 11 9628 - 11829 2146 733 aa, chain + ## HITS:1 COG:NMA1558 KEGG:ns NR:ns ## COG: NMA1558 COG1629 # Protein_GI_number: 15794451 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Neisseria meningitidis Z2491 # 68 733 1 706 706 712 55.0 0 MNSKLALMPLLIASAFSYAADEATPETPVQQQLQEVNVRADAKRVKAARSYSIASDGDLR DRVNLGLLGKANAFTAPITVVNYDEKVLENNASRTLVDTIAKNDASTMQFGGESNTIQGV YVRGLQLDARQFSINGLAGLYSYYHTPTAGVSSAQLIKGASSSTVGMDPEGAAGSSVNIE TKKASDEGNRKIGLAVFSKNRTEGAIDIGQRFGENKQFGIRFNGKYRKGETARKGYKEDN QEFALNTDYRGEKLRLSFDSMYNHRNTEGGRARIHEMQDLNFAMPAAPSGKTLLVPSWQE QTTKTMTNALTFEYDTDYNMQISGGLGYMESVYKGSFTQLLMKNRAKGGNLGNYTAQAAQ PFEFLSRTTSGNLKARGEFETGPVVHNWATSFDYIKRHRDHDQGTRNGDALDTNIYNPVF PITHRNNPANIQGTEHTTYETPSLAISDTLGFADNTIRLTLGGRYQWVKQTAHPNLTGNA KTDANRRSSTVKFSKKRFSPMFAAAWVPNTGMVVYGNYMQDLEPGATNEDTGEMSKPRVS KQIEMGVRKNWGDVVTSLNAFQIVRPGYWRNTQEQHGKEINRGVEFNTYANLMNKTLRPS FGIMYLKAQLKDYPRYNNTLTNGNQVASPRVIAKAGIEWDTPFVQGLTLKSNIQYYGKSF QDTERQYKLPSYTLVDVGARYKTKLGKNTLTVSSSVENLFNKNYWQVQRGQYDRSFAVVG MPRTYWLKAELDF >gi|257257238|gb|ACDX02000010.1| GENE 12 12027 - 12311 221 94 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|56478165|ref|YP_159754.1| RNA-binding protein [Aromatoleum aromaticum EbN1] # 13 93 11 91 156 89 51 5e-17 MTDNKLSTKEILELKARAHHLHPVVMVGQQGLTESVIKETDAALTAHELIKVRVFGDDRA ERVEICNALCDAVDAQLVQHIGKLLVLWRKNLEA >gi|257257238|gb|ACDX02000010.1| GENE 13 12420 - 13040 551 206 aa, chain + ## HITS:1 COG:NMA1008 KEGG:ns NR:ns ## COG: NMA1008 COG0293 # Protein_GI_number: 15793964 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 23S rRNA methylase # Organism: Neisseria meningitidis Z2491 # 1 206 1 206 206 399 94.0 1e-111 MAVRSKSSKAWLHEHVNDHYVHMAQKDGYRARAAYKLLEINEKDKLIKPGTVLADLGSAP GSWSQVAAKLVGNSGRVFALDILPMDEIEGVSFIQGDFRENDVLAQFETLLDDRPLDLVI CDMAPNMSGNAVTDQARSFYLCELALDFAVNHLKTGGSFLVKVFQGAGYQEYMAAMREIF GIVQTRKPEASRNRSSEIYLLGKNKR >gi|257257238|gb|ACDX02000010.1| GENE 14 13105 - 15060 1574 651 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 [Rickettsia canadensis str. McKiel] # 1 633 1 628 636 610 51 1e-174 MGNTFKSILLWVALCVGLMAAFNALTSKQENKQQIEYSQFIQQVNNGEVANVNIEGSVVS GYLIKGERTDKTSFFTNAPLDDNLVKTLLDNKVRVNVIPEEKPSMLASLFYSLLPVLLLI GAWFYFMRMQSGGGGKGGAFSFGKSRARLLDKDANKVTFADVAGCDEAKEEVQEIVDYLK APSRYQSLGGRVPRGILLAGSPGTGKTLLAKAIAGEAGVPFFSISGSDFVEMFVGVGASR VRDMFEQAKKNAPCIIFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLVEMDGFESNQTVI VIAATNRPDVLDPALQRPGRFDRQVVVPLPDIRGREQILKVHAKKVPLDASVDLGSLARG TPGFSGADLANLVNEAALFAGRRNKTKVDQSDFEDAKDKIYMGPERRSMVMHEDEKRATA YHEAGHAIVAESLPFTDPVHKVTIMPRGRALGLTWQLPERDRISMYKDQMLSQLSILFGG RIAEDIFVGRISTGASNDFERATQIAREMVTRYGMSDKMGVMVYAENEGEVFLGRSVTRS QNISEKTQQDIDAEVRRILDEQYQVAYKILDENRDKMETMCKALMDWETIDRDQVLEIMA GKQPSPPKDYSHNIRQDNAEPSELQTEPEPQETVAQESAPIEVFEDSVNKS >gi|257257238|gb|ACDX02000010.1| GENE 15 15509 - 16459 710 316 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 8 312 5 304 306 278 48 9e-74 MSNHHKLIILGSGPAGYTAAVYAARANLKPVIITGVEQGGQLMTTTEVDNWPADAEGVQG PELMARFLAHAERFGTEMIFDQIHTVDLQNRPFTLKGDMGEYTCDALIVATGASAKYLGL PSEETFAGKGVSACATCDGFFYKQQDVAVVGGGNTAVEEALYLANIANTVTLIHRRDSFR AEKIMVDKLMQRVEEGKIILKLNSNLDEVLGDEGGVTGARLKHNDGTTEDIAVKGVFIAI GHKPNTDIFKGQLDMDETGYLKTKGGTGDNVGATNIEGVWAAGDVKDHTYRQAITSAASG CQAALDAERWLDRQGL >gi|257257238|gb|ACDX02000010.1| GENE 16 16737 - 17738 1523 333 aa, chain - ## HITS:1 COG:NMA1011 KEGG:ns NR:ns ## COG: NMA1011 COG0113 # Protein_GI_number: 15793967 # Func_class: H Coenzyme transport and metabolism # Function: Delta-aminolevulinic acid dehydratase # Organism: Neisseria meningitidis Z2491 # 1 333 6 338 338 579 90.0 1e-165 MNFPPRYVSATRMRRMRKDDFSRRLMREHTLTADDLIYPVFVLEGSNQEEAVPSMPGVKR QSLDKLLFTAEEALKLGIPMLALFPVVTRNKTELAEEAYNPEGLVPTVVRTLREKFPELG IMTDVALDPYTIHGQDGLTDANGCVLNDETIEVLVKQALCHADAGAQVVAPSDMMDGRIL AIREALEDAGHIHTRIMAYSAKYASAFYGPFRDAVGSSGNLGKADKKTYQMDPANTDEAL HEVALDIQEGADMVMVKPGLPYLDVVRRVKDEFGVPTYAYQVSGEYAMLQAAIQNGWLDG EKVILESLLAFKRAGADGILTYYALEASKLLKK >gi|257257238|gb|ACDX02000010.1| GENE 17 17892 - 18617 901 241 aa, chain - ## HITS:1 COG:NMB1768 KEGG:ns NR:ns ## COG: NMB1768 COG3210 # Protein_GI_number: 15677610 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Large exoproteins involved in heme utilization or adhesion # Organism: Neisseria meningitidis MC58 # 38 213 2316 2491 2514 63 30.0 2e-10 MANIKLKTHISYILLASALLSGCHTYQVDQSRRSKIAQFAINHPVAAQVIGVEDKNSTNL TSNAARFATRTGLDDRANGEGRGTQVNAVRQALWQAAISSQFDSEIANRAGNAYLTDMEI REGKTDYYSRFLADQAVDQRNNRIGRSIGSGKPGADMKALLQSVLFYYHKVGLWTASEVK ASGRKVWRISQEKLSEAEYRRALKNIAPLNTNGMLPNEQNLKTDTFKEIKKTVKVITKVE D >gi|257257238|gb|ACDX02000010.1| GENE 18 18758 - 19060 310 100 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261365010|ref|ZP_05977893.1| ## NR: gi|261365010|ref|ZP_05977893.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 13 100 1 88 88 164 100.0 1e-39 MDLLPPNHARSHMTFIALTNIFLIVLFVFTMLFVRWRNRKLKQAYLARILKQPETFEWLS RNLSGDEVKDIQAIRTHFGLPLQESKQLINIFRSQNPGKM >gi|257257238|gb|ACDX02000010.1| GENE 19 19208 - 20749 1463 513 aa, chain + ## HITS:1 COG:NMA1574 KEGG:ns NR:ns ## COG: NMA1574 COG0477 # Protein_GI_number: 15794467 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Neisseria meningitidis Z2491 # 1 512 1 512 513 834 91.0 0 MKFLDREATIAKPGFNRWLVPPAALAVHLAIGQIYAYSVFNAPLTKLIGITEPAAGDWKL TTVGWIFSIALAMLGASAALFGTWMERVGPRKAMFVAACCFSLGFFVSAIGVSTHNLFLL YLGNGVIGGIGLGLGYIGPVSTLMKWFPDKPGMATGLAIMGFGGGAMLASPLSVSLMNAF SDDVSVGVAPTFVVLGLFYLVLMMFGAFTIRVPAEGWKPEGYVAPKTKNKLVSSNHVNVS QAMKTPQFWLLFWVLCLNVTAGIGVLGQASVMIQELFSEASVGKQAAIGAGAAAGFVSLL SLFNMGGRFLWSSVSDRIGRKNTYTIFFVLGSLLYFAVPSIGESGNKALFIIGFCVIISM YGGGFAAIPAYLKDLFGTYQVGAIHGRILLAWSTAAVIGPVLVNYIRQSQIDSGVPAAQA YGVTMYIMAGLLIVGLLCNLAVKSVHEKHHETDVKTAAHSGDPDDETAVSDAYLLQEKVA AGGFSVWWRWALVGIPLVYGVVMVFVKALGLFR >gi|257257238|gb|ACDX02000010.1| GENE 20 21043 - 22596 1890 517 aa, chain - ## HITS:1 COG:NMB1345 KEGG:ns NR:ns ## COG: NMB1345 COG5339 # Protein_GI_number: 15677211 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 1 516 1 516 516 699 66.0 0 MKKYLIPVAAVAVAAALGTPYYLGIKAEESLTAQQKLLQESGFLTVESHQYERGWFSATE TTVIRLKPTLLQNTQKYLPDNLKTILQEPITVINHISHGPFAGDIGTQAHIETEFKYHPE TEKALSRFFGKQTPVTMSNTIYFSGSGKLDLSIPAFDYEELSGIKLNWKGLSGHTDYKKD FQSYSHDYLAPSLQVKLADKGDISLENLHFQSETTSGLNKLSLGKSSTTLDKFLLQWKDN IDYNIKLNELVNLVTNLQIGAFINPTGSIPPSKIEVSKLKFETDTHEADKFINSEGRFQF QDLTYGDEKYGPLDINIAAEHLDASGLLALKNKFAEIADKKMSEEEIQNALIQTAKNEAS SLFTNNPILNVKTFKFTMPQGDVDVSGKLLFKGLATKDLNSLSDMLKKTEAGFDMAVPQK LLEQLAISQARSIFSVNPDDEANGQAGIEDVTETLRLMVDSTIRSMADEKYLTLENGTVK TKMTLQNGELKLNGKVLQSDPEPDFDETDMVSEPSHP >gi|257257238|gb|ACDX02000010.1| GENE 21 22883 - 24292 1846 469 aa, chain - ## HITS:1 COG:NMA1647 KEGG:ns NR:ns ## COG: NMA1647 COG0477 # Protein_GI_number: 15794541 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Neisseria meningitidis Z2491 # 16 468 56 508 513 592 74.0 1e-169 MNKTESNVSETPPVRPSRWLPLLLAIAIFMQMLDATILNTALPEIAKDFKVSPLNMQLAA ISYTLTVALLIPLSGYLVDRFGTKNVFFGSIGIFMLGSALCAAAANLPMLVMARVIQGIG GSMLVPVPRLTILRVYDKSQLLNAINYAVMPALIGPIFGPLVGGYLVEYASWHWIFLLNL PIGLLGVLLGWRIMPDVKGENTTLDLSGYLTFASAACLLMLAVEMVSHSGAVWFSLLLAL GGTAFSLLYYRHMKTAANPIYAADLFQVRTFRLGLTGNLFSRLGISSIPFLLPLLFQVAF GFAASVSGWLVAPVAFASLVVKPLIKPLMSRFGYRNVLIWNTRLLAILIMLLALPDADTS LIAWIVLLLLIGTCNSIQFSAMNTLTIADLRAHQTGSGNSLMAVNQQLAISLGIALGALI LQSWSQSSFTAGNLHLSFRLTLLSIGLITLVSSIIFSRLHISDGRNLTD >gi|257257238|gb|ACDX02000010.1| GENE 22 24720 - 25499 906 259 aa, chain + ## HITS:1 COG:NMB1436 KEGG:ns NR:ns ## COG: NMB1436 COG0247 # Protein_GI_number: 15677294 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Neisseria meningitidis MC58 # 1 259 1 259 259 516 93.0 1e-146 MSAITPPKITTFDSKPTDVYFFGTCVLDLFMPEAGMDAITLIEQQGIRVHYPMAQSCCGQ PAYSSGHPTEAFDVAKAQLDLFPENWPIVVPSGSCGGMMKHHWPTLFKNTEYESKAVDCA NRIIEFTHFLLAIGYKPEDKGEPVKVAVHTSCAARREMNVHISGWQLIDGMENVERIVHD HESECCGFGGTFSVKQADISGAMVTDKVAALKETGATEIISADCGCMMNIGGKIAKDEPN MPRPKHIASFLLERTGGKA >gi|257257238|gb|ACDX02000010.1| GENE 23 25496 - 26197 905 233 aa, chain + ## HITS:1 COG:NMB1437 KEGG:ns NR:ns ## COG: NMB1437 COG1556 # Protein_GI_number: 15677295 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis MC58 # 1 233 1 233 233 455 95.0 1e-128 MSARENILAKLKKADALPMEEPAVFDYYREMGVSWDSEVERLKHWAAAMRAVKTEIYWVT KTGWPQVFRQAAEGKGLKNILLPLATEHGQIARAALVGSNIEPIAFEREIDTWKTEFFAN IDAGFSGSQCGIARTGTLMLFSSPEEPRTLSLVPPVHFCLFDTAKMYNEFHNAVEGEKLV ENGMPTNVFLISGPSKTADIQLTLAYGAHGPRDLVILAILPDHISPADLEENA >gi|257257238|gb|ACDX02000010.1| GENE 24 26194 - 27648 1612 484 aa, chain + ## HITS:1 COG:NMA1650 KEGG:ns NR:ns ## COG: NMA1650 COG1139 # Protein_GI_number: 15794544 # Func_class: C Energy production and conversion # Function: Uncharacterized conserved protein containing a ferredoxin-like domain # Organism: Neisseria meningitidis Z2491 # 1 484 1 484 484 963 97.0 0 MTTQTIKFHMKPETFKQNAAISLQDKPLRKSLRTAMDMLMTKRKAVLSDEEELQNLRDLC EHVRQRSLSKLPALLEQLEENLTKLGVKVHWAETPAEACEIIHDIITAKNGKLMVKGKSM VSEEIELNHYLEAKGIKAVESDLGEFIVQMAGEKPTHIVMPAIHKTKEQVSELFHQNLGT PLTDDVDQLTGFARKALRDIYSTADVGLSGVNFAVAETGTLCLVENEGNGRLSTTVPPVH IAITGIEKVVAKLSDVPPLYSLLPRSAIGQNITTYFNMITGPRRSEELDGPQEMHLVLLD NGRSQAYAEDQMRRTLQCIRCGACMNHCPVYTRIGGAAYGTTYPGPIGEIISPHLLGLDA TRDLPTACTMCGACVEVCPVRIPITEQMQRLRVEAQRSPTEVVPHPIRGQGASHTFGEQM AWRTFNGIFSGSKAYRAFGWAATKFRALTPSKQLGWTDNRVPMKPAKKTLHEMMAEKMRQ KEKA >gi|257257238|gb|ACDX02000010.1| GENE 25 27953 - 29812 2891 619 aa, chain + ## HITS:1 COG:NMA1361 KEGG:ns NR:ns ## COG: NMA1361 COG0129 # Protein_GI_number: 15794282 # Func_class: E Amino acid transport and metabolism; G Carbohydrate transport and metabolism # Function: Dihydroxyacid dehydratase/phosphogluconate dehydratase # Organism: Neisseria meningitidis Z2491 # 1 619 1 619 619 1225 97.0 0 MPDYRSKTSTHGRNMAGARALWRATGVMETDFGKPIIAVANSFTQFVPGHVHLHNMGQLV AREIEKAGAIAKEFNTIAIDDGIAMGHSGMLYSLPSRDLIADSIEYMVNAHCADALVCIS NCDKITPGMLIAAMRLNIPTIFVSGGPMEAGKVIGVANIQPERRLDLIDAMIESADDNVS NQQVEEVEQNACPTCGSCSGMFTANSMNCLTEALGLSLPGNGSYLATHAGRKELFLEAGR MIVEITKRYYEQNDETVLPRSIATKKAFENAMTMDIAMGGSTNTILHLLAVANEAGVDFK MADIDRLSRVVPCICKTAPNNHDYYMEDVHRAGGIFAILKELDKAGKLHTDVYTIHAPTL KDAIEKWDVTNPENTHAIERFKAAPGGVRTTQAFSQNRMWKTLDLDREKGCIRNVEHAYS QDGGLAVLFGNIAERGCVVKTAGVDESILKFTGRARVFESQEAAVEGILGNQIVAGDIVI IRYEGPKGGPGMQEMLYPTSYLKSKGLGKACALLTDGRFSGGTSGLSIGHASPEAAEGGA IGLVHEGDTIEIDIPNRSINLKVSDEELAKRRAEMEARGSKAWKPENRDRYVSAALRAYG AMATSADKGAVRDVSQIER >gi|257257238|gb|ACDX02000010.1| GENE 26 30072 - 30551 718 159 aa, chain + ## HITS:1 COG:NMB1512 KEGG:ns NR:ns ## COG: NMB1512 COG0245 # Protein_GI_number: 15677365 # Func_class: I Lipid transport and metabolism # Function: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase # Organism: Neisseria meningitidis MC58 # 2 156 3 157 160 271 90.0 4e-73 MNIRIGQGYDVHQLVEGRDLILGGVNIPFEKGLLGHSDADALLHAITDALLGAAGLGDIG SHFPDTAAEFKDADSRVLLREAYKSVQALGWHVVNVDTTIIAQKPKLAPHIPAMRANIAA DLGIQTTCVNIKGKTNEKLGYLGRMEAIEAQAAVLLEKA >gi|257257238|gb|ACDX02000010.1| GENE 27 30622 - 31293 968 223 aa, chain + ## HITS:1 COG:NMA1711 KEGG:ns NR:ns ## COG: NMA1711 COG0120 # Protein_GI_number: 15794604 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase # Organism: Neisseria meningitidis Z2491 # 1 222 1 222 223 372 86.0 1e-103 MATQDELKRIAAEKAVEFVPENEYIGIGSGSTVNMFIEALGKSGKKIKGAVSTSKKSSEL MAQYDIPEVSLNDVMYLAVYIDGADEVNHMLQMIKGGGGAHLNEKVVASASDKFICIADE SKYVSRLGKFPLPVEVLPGARSLVSRKLLAMGGQPELRLDCTTFHGNQIVDVYDLNIDRP LTMEDEINRITGVVENGIFARNAADLLILGTEQGAKVIKPGQN >gi|257257238|gb|ACDX02000010.1| GENE 28 31378 - 32085 789 235 aa, chain + ## HITS:1 COG:NMA1710 KEGG:ns NR:ns ## COG: NMA1710 COG1525 # Protein_GI_number: 15794603 # Func_class: L Replication, recombination and repair # Function: Micrococcal nuclease (thermonuclease) homologs # Organism: Neisseria meningitidis Z2491 # 1 235 16 233 233 231 54.0 7e-61 MLKWLPVFLSVLGALGYGSRDTELIRSSVQIVSDITDSRHFGLESVGALLTDTIRSKSSE NEQSKTGIYKKTPYTYHGKITKIHDGDTLHVIDEDGAKHKIRMAYIDAPEINQAYGTRSR DNLIAKADGKKVKVRVFEKDRYKREVAQVSVGTTDLNLMQLRDGAAWHYDSYAKKQQSKT AYADYAAGQKQAKQKRKGLWSGKNPQAPWDFRRGEREVQEGRGNSKSEENWLGIW >gi|257257238|gb|ACDX02000010.1| GENE 29 32153 - 33988 2624 611 aa, chain - ## HITS:1 COG:NMA1540 KEGG:ns NR:ns ## COG: NMA1540 COG0322 # Protein_GI_number: 15794433 # Func_class: L Replication, recombination and repair # Function: Nuclease subunit of the excinuclease complex # Organism: Neisseria meningitidis Z2491 # 5 611 22 628 628 1224 97.0 0 MTTDFDIPLFLKNLPNLPGVYRFFDEGGNVLYVGKAVNLKRRVSGYFQKNDHSPRIALMV KQVQHIETTITRSEAEALILENNFIKALSPKYNILFRDDKSYPYLMLSGHQYPQMAYYRG TLKKPNQYFGPYPNSNAVRDSIQVLQKVFMLRTCEDSVFEHRDRPCLLYQIKRCTAPCVG HISEEDYRDSVRQAATFLNGKTDELTRTLQHKMQTAAANLQFEEAARYRDQIQALGIMQS NQFIDSKNPNNPNDIDLLALAVSDGLVCVHWVSIRGGRHVGDKSFFPDTKNDPEPNGQDY AEAFVAQHYLGKSKPDIIISNFPVPDALKEALEGEHGKQMQFVTKTIGERKVWLKMAEQN AQMAIAQRRLQQSSQQHRIDELAKILNMNSDDLNRLECFDISHTQGEATIASCVVYDEQN IQPSQYRRYNITTAKPGDDYAAMREVLTRRYGKMQEAEANGEAVKWPDVVLIDGGKGQIG VAISVWEELGLHIPLVGIAKGPERKAGMEELILPFTGETFRLPPNSPALHLLQTVRDESH RFAITGHRKKRDKARVTSSLSDIPGVGSKRRQALLTRFGGLRGVVAASKEDLEQVEGISK ALAETIYEHLH >gi|257257238|gb|ACDX02000010.1| GENE 30 34127 - 34447 387 106 aa, chain - ## HITS:1 COG:no KEGG:NGK_1304 NR:ns ## KEGG: NGK_1304 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 13 106 6 103 103 104 60.0 1e-21 MLLKKGLLSTLPIALILGFSAQTADADTHKRHHPRTQAEYGKLHPACKKYLDRRAAWYKY KGNRAELKENRKARKAFRELPYKEQRIQCRAAYEAFDDFDHGKFRR >gi|257257238|gb|ACDX02000010.1| GENE 31 34527 - 35465 929 312 aa, chain - ## HITS:1 COG:no KEGG:NMA0696 NR:ns ## KEGG: NMA0696 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_A # Pathway: not_defined # 1 312 1 311 311 533 86.0 1e-150 MGYNMMTTQKWYEHITDVIIGTTQRFNREKSADSIEYINERKGSPIGAICVISIDVYAAC SYAYLFEHNLKKFKQYVYAYSKLEILASMGWSDPAPFFFPCDMLNIQNPMFLMLMSDSPQ LREFLVRNIDNIANDTEAFVNRYDLNRHMIYNTLLMVEGKQLERLKQRSEKVLAHPTPSK WLQKRLYDYRFFLAFAEQDAEAMKAALEPLFDKKTARMAAKETLSYFDFYLQPQIVTYAK IASMHGFDLGIDHEIAPRDLIVYDPLPADEYQDIFDFMKQYDLSYPYEYLQDWIDYYTFK TDKLVFGNAKRE >gi|257257238|gb|ACDX02000010.1| GENE 32 35963 - 36646 977 227 aa, chain - ## HITS:1 COG:NMA1508 KEGG:ns NR:ns ## COG: NMA1508 COG1187 # Protein_GI_number: 15794407 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Neisseria meningitidis Z2491 # 1 225 1 225 230 352 75.0 4e-97 MQLIKYLQSQGIGSRKQCQWLIQNDCVEINDTVRNDTKADIDPAEVQTLRIDGEDIVVVP MPYFYILLNKPADYETSHKPQQYPSVFSLFPDHMRNIDMQAVGRLDADTTGVLLITNDGQ FNHRVTSPKHKVPKIYRVTLKHPADDSLCETLKNGVLLHDDNETVHAAEAVLENPTTLLM TITEGKYHQVKRMVAAAGNRVEHLHRDEFNGRTVENLASGEWKFITV >gi|257257238|gb|ACDX02000010.1| GENE 33 36687 - 37805 1226 372 aa, chain - ## HITS:1 COG:NMA1400 KEGG:ns NR:ns ## COG: NMA1400 COG2890 # Protein_GI_number: 15794312 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methylase of polypeptide chain release factors # Organism: Neisseria meningitidis Z2491 # 38 369 1 329 331 446 70.0 1e-125 MFPIIPTDRAAAEWRNESTQKPPKQAVYVHEGNAADILKNAHAHTATVWTGDFHNAKQVL AAMKKRVRRSSEKTKNAPIDIQTTFHTHRMKQAQQSRVLNMLAVEIGAGFQLGNPRAPNV RAALADVYDEPNDTPFLLPLNQLLGFIGAHEWHKKGIDIPQLGGKIHVPFGVFSPLRGEY LDLIAQAPLNPHIQTAFDIGTGSGVIAAILAKRGISEIIATDTNPKAITCATANLARLGL DKQVVVQAVDLFPEGCADLIVCNPPWLPAKPTSAVETALYDPDNAMLTAFLNGVRQHLNP QGEAWLIISDLAEHLHLRDRDFLEQCFQTTSLEVVDILKTKPRHRKAADESDPLAFARNR ETTYLYRLKAKS >gi|257257238|gb|ACDX02000010.1| GENE 34 38014 - 39228 1812 404 aa, chain + ## HITS:1 COG:NMB1473 KEGG:ns NR:ns ## COG: NMB1473 COG0436 # Protein_GI_number: 15677327 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Neisseria meningitidis MC58 # 1 404 1 404 404 820 94.0 0 MEKFPKSSKLDHVCYDIRGPVHKKALQLEEEGHKILKLNIGNPAPFGFEAPDEILVDVIR NLPTAQGYCDSKGLYSARKAIVHYYQTKGLRDISVNDVYIGNGVSELITMSMQALLNDGD EILIPAPDYPLWTAAATLAGGTVRHYLCDEENDWFPNLADMEAKITPKTKAIVVINPNNP TGAVYSKEILLEIAELARKHGLIIFADEIYDKILYDGAVHHHIAALAPDLLTITFNGLSK AYRVAGFRQGWMVLNGPKEHAKGYIEGLDMLVSMRLCANTPMQHAIQTALGGYQSINEFI LPGGRLLEQRNKAWELINQIPGLSCVKPMGAMYMFPKIDTEMYGIHDDMKFIYDLLVREK VLFVQGTGFNWIRPDHFRIVTLPYTHQIEEAMGKLERFLQTYRQ >gi|257257238|gb|ACDX02000010.1| GENE 35 39642 - 40889 681 415 aa, chain - ## HITS:1 COG:ECs1929 KEGG:ns NR:ns ## COG: ECs1929 COG0582 # Protein_GI_number: 15831183 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Escherichia coli O157:H7 # 5 360 3 402 411 166 31.0 1e-40 MATKRIPTGVVIRDRSIKIWFMYRGKRCWESLPLKPTTANIRHATKLREEVCTRIAIGVF DYAEFFPDSKRAEETERSPTFREMAEAWLATVNQLSHSTLSRYRGMLNSHVLPKIGDMSI DRIQYSTLAGLLATLDCSAKTRNNIATVIRQPFVLALRDGRIKDNPAQHLANAKVQKEPP DPFTLEEAEAILGYLKNEPVFHNYFELAFFSGMRTSELIALTWQDIDFQRQCVCVNKASV AGKLKSTKTHSYRDIELNSRALEALRRQWQRTGLASGYVFINPKTGSPFENDKVPWRPWQ HAIKIAGVRYRKPYNTRHTFATLNLMAGANPMWVARQMGHSTMKMLLENYSRWIDLADKQ REKSKIEQLFDGKCANSVPKNTEMEISTGYLSDILVEAGGIEPPSESPLQSVLHT >gi|257257238|gb|ACDX02000010.1| GENE 36 40859 - 41047 245 62 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|255065621|ref|ZP_05317476.1| ## NR: gi|255065621|ref|ZP_05317476.1| putative phage excisionase [Neisseria sicca ATCC 29256] putative phage excisionase [Neisseria mucosa ATCC 25996] putative phage excisionase [Neisseria sicca ATCC 29256] putative phage excisionase [Neisseria mucosa ATCC 25996] # 1 62 1 62 62 114 100.0 2e-24 MLNQIQLKRYAELSGYTEKALRDKISTGVWVEGLHYYRAPDRHILINVKEVEKWQRNEYQ PV >gi|257257238|gb|ACDX02000010.1| GENE 37 42475 - 43170 633 231 aa, chain - ## HITS:1 COG:NMA1253 KEGG:ns NR:ns ## COG: NMA1253 COG3039 # Protein_GI_number: 15794187 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS5 family # Organism: Neisseria meningitidis Z2491 # 8 231 112 335 335 395 89.0 1e-110 MPLPQPAAQDDTLSELLELINYQLTEKGLKIEKASAAVIDATIIQTAGSKQRQAIEVDEE GQVSGQTTPSKDKDARWTKKNGLYRIGYKQHTRTDEEGYIEKLHITPANTHECNHLSPLL EGIAEGTTVYADKGYDSKENRQHLKEHRLLDGIMRKAHRNRPLTENQTKRNRYLSKTRYV VEQSFGTLHRKFRYARAAYFGLIKVSAQSHLKAMCLNLLKAANRLSVSVGA >gi|257257238|gb|ACDX02000010.1| GENE 38 43113 - 43481 399 122 aa, chain - ## HITS:1 COG:NMA1619 KEGG:ns NR:ns ## COG: NMA1619 COG3039 # Protein_GI_number: 15794513 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS5 family # Organism: Neisseria meningitidis Z2491 # 1 122 1 122 122 235 98.0 1e-62 MSTFFRQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQRTRYLRDHRGRPAYPLLSM FKAVLLGQWHSLSDPELEHSLITRIDFNLFCRFDELSIPDYSTLCRYRNRRHKTTPCPNC WN >gi|257257238|gb|ACDX02000010.1| GENE 39 43792 - 43959 116 55 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|288575946|ref|ZP_05977914.2| ## NR: gi|288575946|ref|ZP_05977914.2| phytoene dehydrogenase [Neisseria mucosa ATCC 25996] phytoene dehydrogenase [Neisseria mucosa ATCC 25996] # 1 55 21 75 75 95 100.0 2e-18 MKDWSAKNYLSLEEETLKKYERYMKISEKIFSGGKTFIVLPPKFFEIIGLGKVEL >gi|257257238|gb|ACDX02000010.1| GENE 40 44037 - 44357 431 106 aa, chain - ## HITS:1 COG:SP1928 KEGG:ns NR:ns ## COG: SP1928 COG3293 # Protein_GI_number: 15901752 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 5 103 24 124 129 80 46.0 6e-16 MGAQHDMRLARRHLTELYPYKIVIADKGYQGLAKTGLQTPKKKSKHHLMNKQDKEANRRL GKLRTVIEHINRKLKIFKILSLPYRNRRKRFGLRANLIAGLINAMG >gi|257257238|gb|ACDX02000010.1| GENE 41 44330 - 44830 340 166 aa, chain - ## HITS:1 COG:no KEGG:MAE_18060 NR:ns ## KEGG: MAE_18060 # Name: not_defined # Def: transposase # Organism: M.aeruginosa # Pathway: not_defined # 1 148 1 154 214 100 40.0 3e-20 MKYENLIQRSDREFKRLTGVTPVLFHEMLQITTEAESRKVKSGRPHTLSLADQLLLTLSY LRHYHTQLELAAIYGLSESNVCRTIRKTEDALIRCKRFSLPKHKNPGDHTVIIDVTESPI ERPKKQRQYYSGKKSGTRLKSRSYTAEKLKKSSASGRGWVLSMICV >gi|257257238|gb|ACDX02000010.1| GENE 42 44848 - 46146 994 432 aa, chain - ## HITS:1 COG:PM2006 KEGG:ns NR:ns ## COG: PM2006 COG0457 # Protein_GI_number: 15603871 # Func_class: R General function prediction only # Function: FOG: TPR repeat # Organism: Pasteurella multocida # 309 423 461 573 788 70 39.0 4e-12 MDVRGLINESSRLLFKEGNYAEAIKKLYQAWDEITDKRTQITEQIAIQYLLGLCYLKYAK KTKDTNKTDKLFGKAVEHHQQWLNLAKKLVYEQGSIQEQNKAQSYLGLCYLQQAKKTKDL DKAAKLFEKAVEHYQKWLQLTKQLEDEQDSIQGQIKVHFWLGCCYFAQAKKTKDMNKVSE LFKQVTAFFKKQLRLARQLENAQIRIQQQIFARFGLSRCYIEQVKRIKNTDKAEALFKKQ TSKHLFAAYTQLSQLSDETEQKRMEKRICQSLRDVDYLNEDWHSYFEKKKQEIQESLFKN KTSQPQDAVATILAVLHITPIELGFTPMAHYTSPYVCHILFGIDGNEIDIPMRLGSSTYM NDPSEGRGLLELLNQQDLELENKADGASHNAFFTCFSSRVNDLNQFRLYGKEDGVEASGC CLVFNRPLAKVS >gi|257257238|gb|ACDX02000010.1| GENE 43 46318 - 47136 704 272 aa, chain - ## HITS:1 COG:NMA0388 KEGG:ns NR:ns ## COG: NMA0388 COG1793 # Protein_GI_number: 15793396 # Func_class: L Replication, recombination and repair # Function: ATP-dependent DNA ligase # Organism: Neisseria meningitidis Z2491 # 1 272 2 274 274 496 90.0 1e-140 MRTSMQGMIPIFAAFFIQTALGADLMLAQEYKDQDITGWAMSEKLDGVRAYWDGRQLVSR QGYAFTPPKGFTAQFPPYPLDGELYSGRGQFEQISAAVRSSSGDWRGIRLHVFDVPKAQG NLYQRLAVATQWLKTHPNAPITIIPQTKVRDRQHAMDFLKQIEAQGGEGVMLRQPESRYS GGRSSQLLKLKSQYDDECTVTRHYEGKGRNAGRLGAVGCKNQHGEFRIGSGFKDKDRDNP PKIGAVITYRYRGFTQKGTPKFATFVRVRTDR >gi|257257238|gb|ACDX02000010.1| GENE 44 47254 - 47886 978 210 aa, chain + ## HITS:1 COG:NMA0387 KEGG:ns NR:ns ## COG: NMA0387 COG0491 # Protein_GI_number: 15793395 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Neisseria meningitidis Z2491 # 1 210 1 210 210 355 80.0 3e-98 MALQAEIIAVTPFRQNCTLLWDDETREAVLTDVGGDVSFLLQELDAKNLTLTAIWLTHGH LDHAGGVVELREHRPVPVIGPHADDEFLLQALPETTAQYGFPVSPAFEPTRWLTEGETLK VGNHAFQVLHIPGHTPGHVVFYCAEAGLLIAGDVLFYETIGRTDFPRGNHADLIHNIRTK LFVLPEDTRVIAGHGRMTDIGHEKRHNPFF >gi|257257238|gb|ACDX02000010.1| GENE 45 48223 - 48753 848 176 aa, chain + ## HITS:1 COG:NMA0557 KEGG:ns NR:ns ## COG: NMA0557 COG2913 # Protein_GI_number: 15793551 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Small protein A (tmRNA-binding) # Organism: Neisseria meningitidis Z2491 # 1 176 1 171 171 221 66.0 8e-58 MKTSRIAKTALYLAAAAVLSACAGKSHVKADGTTDNPVFPKPYSVTFNKNQGTFPTADEL EQMKPGLSKDDIYKILGRPHYDEGMFGVREWNYLFHFRTPGVPANPDIGSGVEGITTCQY KVLFDKHKYARSFHWKAVFPEDAVCPPVQEVAPQPAPEPQIIIREVAPETHHRIRK >gi|257257238|gb|ACDX02000010.1| GENE 46 48763 - 49194 681 143 aa, chain + ## HITS:1 COG:no KEGG:NMC0324 NR:ns ## KEGG: NMC0324 # Name: not_defined # Def: putative periplasmic protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 143 5 147 147 206 67.0 2e-52 MFKRIILGVSLLAGLNSFAAADAAKEYMQRKKVIVNTAKAELCFTDDAQCYPVLIGKTTP KGTFDMQLMKTSKPGYGGEIIGFKQEKDFLFALHRVWTLKPSERRMQRIASNVVSDRIIT NGCINVTDKVYDKLRQYFVLEVI >gi|257257238|gb|ACDX02000010.1| GENE 47 50004 - 52025 2305 673 aa, chain - ## HITS:1 COG:NMA0207 KEGG:ns NR:ns ## COG: NMA0207 COG1297 # Protein_GI_number: 15793232 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis Z2491 # 1 671 1 672 672 1042 92.0 0 MTQSTHDPYADYRELTLRGMILGALITVIFTASNVYLGLKVGLTFASSIPAAVISMAVLK FFKDSNILENNMVQTQASAAGTLSSIIFVLPGLLMAGYWSGFPFWQTALLCMAGGILGVI FTIPLRYAMVVKSELPYPEGVAAAEILKVGSHEEEGRQGGSGIKELAAGGALAGFMSFCS NGLRVIADSASYWFKSGTAIFQLPMGFSLALLGAGYLVGLTGGIAILLGISIAWGIAVPY FSSHIPQPADMEMAAFAMKLWKEKVRFIGAGTIGIAAVWTLLMLLKPMVEGLRMSFKSFG GGAPAAERTEQDLSPKTMIFWVLSMMLVLGVSFYHFIGDSHITGGMAWLLVVVCTLLASI IGFLVAAACGYMAGLVGSSSSPISGVGIISIVIISLVLLVVGESGSLMADEANRKFLLAL TLFCGSAVICVASISNDNLQDLKTGYLLKATPWRQQIALIIGCIVGAFVISPVLELLYEA YGFTGAMPREGMDAAQALAAPQATLMTTIASGIFAHNLEWAYIFTGIAIGAVLIVVDLVL KKSSGGKRALPVLAVGMGIYLPPSINMPIVIGAVLAAVLKHIIGKKAENREGRLKNAERI GTLFSAGLIVGESLVGVVMAFIIAFSVTNGGSDAPLALGLENWETTASWLGLAFFITGMV FFAQRVLKAGRIK >gi|257257238|gb|ACDX02000010.1| GENE 48 52270 - 54324 3314 684 aa, chain + ## HITS:1 COG:NMA0275_1 KEGG:ns NR:ns ## COG: NMA0275_1 COG0143 # Protein_GI_number: 15793293 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA synthetase # Organism: Neisseria meningitidis Z2491 # 1 564 1 564 566 1155 96.0 0 MTRKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECHYCCADDTHGTPVMLAA QKQGIAPEDMIAKVREEHLADFTGFFIGYDNYYSTHSPENKQFSQDIYRALKANGKIESR VIEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKP ELRESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQPEALNKMKEWLGEGEETTLSDWDI SRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHFI GKDILYFHALFWPAMLHFSGHRTPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNP EWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKHFEGRLKDVS GSALLAKLAAESDTIAEQYENREYARALRDIMALADAVNEYVDANKPWELAKQEGQDERL HEVCSELINAFTMLTAYLAPVLPQTAANAARFLNLDAITWANTRETLGEHAINKYEHLMQ RVEQKQVDDLIEANKQSIQTTPAPVEDSKYEKVAEQASFDDFMKIDMRVAKVLNCEAVEG STKLLKFDLDFGFEKRIIFSGIAASYPNPAELNGRMVIAVANFAPRKMAKFGVSEGMILS AATAEGKLKLLDVDAGAQPGDKVG >gi|257257238|gb|ACDX02000010.1| GENE 49 54382 - 54846 634 154 aa, chain + ## HITS:1 COG:NMA0248 KEGG:ns NR:ns ## COG: NMA0248 COG0454 # Protein_GI_number: 15793266 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Neisseria meningitidis Z2491 # 3 154 12 163 163 208 64.0 4e-54 MNITLLQACHIEPLTRALYQEWHDFAPWSSLEKIRAYYRKCLDGDGLPLAFAAVSEDGRL LGSAALKRFDMEEFPQYEYWLGDVFVLPEYRGKGIGHALIAHCLQTARSLRLPALYLYTP DVQAVYAKYGWREIATQWHNGETVSVMKLDLQVV >gi|257257238|gb|ACDX02000010.1| GENE 50 55050 - 56303 2033 417 aa, chain + ## HITS:1 COG:NMA0258 KEGG:ns NR:ns ## COG: NMA0258 COG0766 # Protein_GI_number: 15793276 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine enolpyruvyl transferase # Organism: Neisseria meningitidis Z2491 # 1 417 1 417 417 717 90.0 0 MDKLKITANGPLNGEIIISGAKNAALPLMCAGLLTSGTLRLKNVPMLADVKTTQKLLQGM GARVLTDNVHEFEINGGTVNNTCAPYELVKTMRASILVLGPTLARFGEAQVSLPGGCAIG SRPVDQHLKGLETMGAEITIEHGYVKAKGRLKGARVVMDMITVGGTENLLMAATLAEGTT ILENCAIEPEVVDLAECLVKMGAKISGIGTSTMTVEGVKELHGCEHSVVPDRIEAGTFLC AVAMTGGKVVLRKAAPKTMEVVLDKLVEAGAIIEAGDDWISIDMQQRPKAVNIRTTEHPG FPTDMQAQFMAMNAVAEGDSRVVETIFENRFMHVPELNRMGANITTEGNTAFVKGVEKLS GAVVMATDLRASASLVMAGLVAGGETIVERIYHLDRGYEHIEKKLGQVGAKIERVRG >gi|257257238|gb|ACDX02000010.1| GENE 51 56429 - 57532 1738 367 aa, chain + ## HITS:1 COG:NMA0224 KEGG:ns NR:ns ## COG: NMA0224 COG1186 # Protein_GI_number: 15793246 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor B # Organism: Neisseria meningitidis Z2491 # 1 367 1 367 367 684 99.0 0 MEAEVINQLNNTLNDLEKRSEDIRVYMDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGK ERKILEGIVLTLDNIASGIEDNRMLIEMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRM FNQPADPNNCFIDITAGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINR ATIRVEGEYAYGLLRTETGVHRLVRYSPFDSNNKRHTSFSSVFVYPEIDDSIEIEINPAD LRIDTYRASGAGGQHINKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYEL EMRKRNEEKQALEEGKSDVGWGSQIRSYVLDSSRIKDLRTGYEVGNTKAVLDGDLDGFIE ASLKQGV >gi|257257238|gb|ACDX02000010.1| GENE 52 57775 - 58692 792 305 aa, chain - ## HITS:1 COG:BH3627 KEGG:ns NR:ns ## COG: BH3627 COG1307 # Protein_GI_number: 15616189 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 7 221 1 214 283 76 21.0 5e-14 MPGSYALYRCAVLSTSSGSIDSMAGRDSTIHILHLNISFNHQWHADGSDVNNKEYCDWRA NHLDEPISTLPPCEDELSKTFNYLVEQGYHEAIVTTLSHKLSDSADVIRKMAAQFPQLKI HVIDTGTCCMPEGFFAMEAERLLRAGLPPQTVVAHLESLKPYCHIVFGLSSLKSLSLGGT LSRVGASFGDWLGLRNVLHFSQDNLERLETVTDDVKMFDSIIANTVSLMNDKPKDQFILS GLYSGDEERYRLFAERFFEKPEGGSGRAYPYHPLSLRTSASAGSAWVWWNALPPLPENFK AKPYH >gi|257257238|gb|ACDX02000010.1| GENE 53 58902 - 59387 557 161 aa, chain + ## HITS:1 COG:NMA2179 KEGG:ns NR:ns ## COG: NMA2179 COG0262 # Protein_GI_number: 15795050 # Func_class: H Coenzyme transport and metabolism # Function: Dihydrofolate reductase # Organism: Neisseria meningitidis Z2491 # 1 160 1 161 162 212 68.0 3e-55 MQTITLIAAYAAHRCIGINNTMPWHLPEDFAFFKTYTTGKPVVMGRKTWESLPKKPLPGR RNIVITRQSDYLAEGAETVSELEEALALCADAQEIIIMGGAQIYAQALPYATDLRLTEVS LDVSGDAFFPEFSSDEWKEQLRETHISAKGIGYAFIHYVRR >gi|257257238|gb|ACDX02000010.1| GENE 54 59482 - 60894 1968 470 aa, chain - ## HITS:1 COG:NMA0178 KEGG:ns NR:ns ## COG: NMA0178 COG2067 # Protein_GI_number: 15793206 # Func_class: I Lipid transport and metabolism # Function: Long-chain fatty acid transport protein # Organism: Neisseria meningitidis Z2491 # 1 470 1 464 464 669 75.0 0 MTNSPIKQTVILLSTVFFSGAVHASGYHFGTQSVNAQGTANSSGAEAADASTIFYNPAGL SKLDSSQVSVNANIVLPSIRYEADSAQYYQGGDVSGSKSGKITKTTVAPHLYGAYKVNDD VTLGLGVYVPFGSATEYEKDSVLRHNINKLGLTSIDIEPVVAWKANENHAFGAGLIAQYS KAELRKYSDWDASGAISQLASGLASRAAGRPVSVSAQGKSDGHAEVKGHDWGFGYQLAWM WDINDRARVGVNYRSKVTHTLKGSAEWEADGAYARRAWDLGALAARGYVPREKASVKIVT PESLSIHGMYKATDKFNLFSDVTWTRHSRFNKAELVFENTKNVVNGKSDRTVITPNWRNT YKVALGGSYQVTDPLQLRAGVAFDRSPVKNAGYRMNSLPDGNRIWFSLGAKYHIGKNHVL DAAYSHIHINDTRYHTDRATGNDVDSKGASGARFKNHADIVGLQYTYKFK >gi|257257238|gb|ACDX02000010.1| GENE 55 61300 - 61758 780 152 aa, chain - ## HITS:1 COG:NMA0167 KEGG:ns NR:ns ## COG: NMA0167 COG1781 # Protein_GI_number: 15793194 # Func_class: F Nucleotide transport and metabolism # Function: Aspartate carbamoyltransferase, regulatory subunit # Organism: Neisseria meningitidis Z2491 # 1 152 1 152 152 281 88.0 3e-76 METPKLSVEAIEKGTVIDHIPAGKGLIILRQFKLLHYGSAVTVGFNLPSKTQGSKDIIKI TGVWLDDNAANRLALFAPEAVVNTIDHFKVINKRRLTLPDEIGEVFRCPNTNCASHGEPV KSRFYVRKQSGQTKLKCHYCEKTFSRDSVTEA >gi|257257238|gb|ACDX02000010.1| GENE 56 61768 - 62688 1488 306 aa, chain - ## HITS:1 COG:NMA0168 KEGG:ns NR:ns ## COG: NMA0168 COG0540 # Protein_GI_number: 15793195 # Func_class: F Nucleotide transport and metabolism # Function: Aspartate carbamoyltransferase, catalytic chain # Organism: Neisseria meningitidis Z2491 # 1 306 1 306 306 581 92.0 1e-166 MPNPLYRQHVISISDLTTEQLELLLQTALKLKADPRDDLLEGKLIGSCFFEPSTRTRLSF ETAVQRLGGKVIGFADGANTSAKKGETLADTARIISSYTDAIIQRHPKDGAARVSAEFSK VPVINAGDGTNQHPSQTLLDLVTIYETQGRLNKLKIAMAGDLKYGRTVHSLCQALKRWDC EFAFVSPPSLAMPEYITEELEAAGCRYQILPDLETAVEWADILYMTRVQRERFDEQEFAK IQGKFNLNAAMLANARPNLRVLHPLPRVDEIHPDVDATPHAYYFEQATNGVYARMAILSL VLNEEV >gi|257257238|gb|ACDX02000010.1| GENE 57 63178 - 65325 3201 715 aa, chain + ## HITS:1 COG:NMB0050 KEGG:ns NR:ns ## COG: NMB0050 COG1289 # Protein_GI_number: 15675988 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis MC58 # 1 715 1 715 716 1086 76.0 0 MKLPPLKPLIITSLPVFASVFIAATLVWRFGTPKLAMPFVLGIIAGGLVDLDNRLTGRLK NIIITVALFTISSLVAQSTLGTGLPFILAMTLMTFGFTILGAVGLKYRTFAFGALAVATY TTLTYTPENFWLTNPVMILLGTVLYSTCTLVFQIILPHRPVQESVANAYEALGGYFDAKA DFFDPDEAAWLGNRQIDLAMSNTGVITAFNQCRAALFYRLRGKHRHPRTAKMLRYYFTAQ DIHERVSSAHADYTELTDTLKNTDLIFRIRRLLEMQGQACRNVAAALRNGKDYTYSKRLG RAMEGCRQSLAHYTDDHPESRNIHHIRRLLDNLGSVDHQLRQLQHSDSPAENDNSSDTRI AALENSSLKNVWQAVRSQLNFESGVFRHATRLSILVAVSCIIVEILHLNLGYWILLTAVF VCQPNYTATKSRVYQRIAGTILGVIVGSLVPYFTPSVETKLWIVIASTTLFFMTRSYKYS FSTFFITIQALTSFSLAGLDVYAAMPVRIIDTIVGSVLAWAAVTYLWPDWRYLTLEKTAA QAVGGNGAYLRKILDQLQYGIADDIEYRTVRRQAHERTATLSSTLSDMSSEPKKYGNNLQ SGFNLLKTSYALTGYISALGAYRSEMDGAYSSDFVRKFYQSGYRIADLLERLPQTSEQDF QTTLSQIRTDLETLQTEAGDARQSHILHRQLTLIAKQLDPCYRSLHDIEAIPQTA >gi|257257238|gb|ACDX02000010.1| GENE 58 65539 - 66510 1003 323 aa, chain + ## HITS:1 COG:NMA1185 KEGG:ns NR:ns ## COG: NMA1185 COG3547 # Protein_GI_number: 15794129 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Neisseria meningitidis Z2491 # 16 323 6 318 318 535 91.0 1e-152 MQGRFMMSTQYNYAGIDIAKRNFVIAVSSLSKTKTETNNPKGIAHTIEYLKKHNVALVVM ESTGGLEVPAAKAIHRAGIAVIIANPRQTHQFAQSQSLTKTDAKDAKMLAFFAQMMMQKE GWQTMLYQPPTEAEEVLEALVNRRNQLVDMRTAEKNRLHQVHETQVESVKQLIAHFDRLI DELDKQIDDHTHTHFDGKAKVAKQIKGIGSTTTATLMAMLPELGRLSHKRLASLVGIAPH PRESGETKFKSRCFGGRSAVRKALYMATVVATRFEPLIRDFYQRLLSKGKPYKVAVTACM RKLLTILNARMRDYFAENGIQTA >gi|257257238|gb|ACDX02000010.1| GENE 59 66578 - 66862 255 94 aa, chain - ## HITS:1 COG:no KEGG:NMC0454 NR:ns ## KEGG: NMC0454 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 7 94 3 90 90 164 93.0 8e-40 MKPLLYKRIKICPACKQGYLYHSKPKYLHDEIILCDECDAVWLKGMNIFYGEYKKDFYSY VPFMESQGITGECIWEGELFDHPYYEDENSNDMD >gi|257257238|gb|ACDX02000010.1| GENE 60 67222 - 68223 1396 333 aa, chain - ## HITS:1 COG:NMA0287 KEGG:ns NR:ns ## COG: NMA0287 COG4143 # Protein_GI_number: 15793304 # Func_class: H Coenzyme transport and metabolism # Function: ABC-type thiamine transport system, periplasmic component # Organism: Neisseria meningitidis Z2491 # 1 333 1 333 333 514 80.0 1e-146 MKLKLSALALLLASANLSAQTEVRLAVHKSFSLPQSAITQFEKANDAKVSVIKAGSGNEM LNKLILSKANPIADAVYGLDNANIGKAREAGILAAAQPKSAPVSAGMPVIAAVNYGYVTL NYDKKWFEQKKLPLPKTLQDLTRPEYKNLLVTPSPATSSPGLAFLMANIGGMGEEGAFKW WAQMRQNGVKVAKGWSEAYYTDFTQNGGAYPLVVSYAASPAAEVHYSKGKYSVPPTGNLF LKGGVFRQVEGAAVLKGAKQPELAAKLVQWLQSGEVQKALPTEMWVYPAVKNTPLPKVFE FAQAPKQTDSPSRNDIDTKQKQWVSRWTKTVLR >gi|257257238|gb|ACDX02000010.1| GENE 61 68286 - 68942 1023 218 aa, chain + ## HITS:1 COG:NMA0286 KEGG:ns NR:ns ## COG: NMA0286 COG1011 # Protein_GI_number: 15793303 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Neisseria meningitidis Z2491 # 6 215 7 216 243 353 80.0 1e-97 MNFSPVWLFDLDNTLHNADAGIFYIINRAMTDYMAQRLKLSEEAASDLRQDYWHRYGATL AGLQIHHPEIDIREFLRESHPIAQILAKLEGMEGTESVLGRLKGRKAVFSNGPSFYVRAI IGALGLENRFDALFGTDDFGLRYKPDPQAYLTVCRLLDAAPEQCIMIDDSADNLHQAKEL GMKTVWFGSKAHPLPFTDAVAKDMQALAECAEKLSALV >gi|257257238|gb|ACDX02000010.1| GENE 62 69005 - 69295 598 96 aa, chain + ## HITS:1 COG:no KEGG:NMC0016 NR:ns ## KEGG: NMC0016 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 83 236 321 325 97 54.0 2e-19 MRYTALILAAAAALTGCTWETYQNESGHTSLRPKYEKGTRIYYEDGTYSRDMRYNQYRPE RRTLKPLHGDQENVRGTTWNKPQGAGQAAPETQTEE >gi|257257238|gb|ACDX02000010.1| GENE 63 69402 - 69593 269 63 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRSLALIFVTAAILSGCTSDRYDFDSRPADTSARTPLKPTTLDRLEHGSHADSYRFTPKP NKP >gi|257257238|gb|ACDX02000010.1| GENE 64 69812 - 71185 2398 457 aa, chain + ## HITS:1 COG:NMB0038 KEGG:ns NR:ns ## COG: NMB0038 COG1207 # Protein_GI_number: 15675978 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) # Organism: Neisseria meningitidis MC58 # 1 453 1 453 456 816 93.0 0 MSATPLNIVILAAGKGTRMYSKMPKVLHRIGGKPMVERVIDTAAALNPQNICVVIGHGKD QVLETVKRDVVWVEQTEQLGTGHAVKTALPHLAAEGRTLVLYGDVPLIDTATLETLLEAA GSEVGLLTDVPADPTGLGRIIRDSQGSVTAIVEEKDADAAQKAVREINTGILVLPNAKLE NWLNSLSSNNAQGEYYLTDLIAKAVADGIKVHPVQVRASHLAAGVNNKLQLAELERIFQT EQAQELLKAGVTLRDPARFDLRGRLKHGQDVVIDVNVVLEGDIEIGDNVEIGANCVIKNA KIGANSKIAPFSHLEDCEVGQNNQIGPYARLRPQARLSDDVHVGNFVEIKNAAIGKGTKA NHLTYIGDAEVGSKTNFGAGTIIANYDGVNKYKTVIGDEVRIGSNCVLVAPVTLGNKVTT GAGSAITRNVEDNKLALARARQTVIEGWIRPEKGDKK >gi|257257238|gb|ACDX02000010.1| GENE 65 71956 - 72999 1098 347 aa, chain - ## HITS:1 COG:RSp0307 KEGG:ns NR:ns ## COG: RSp0307 COG2070 # Protein_GI_number: 17548528 # Func_class: R General function prediction only # Function: Dioxygenases related to 2-nitropropane dioxygenase # Organism: Ralstonia solanacearum # 5 341 12 347 362 246 47.0 7e-65 MSRILSSLRYPLIQAPMAFAHDTELPLAVGKTGALGSLAGAMYDAAGLDKALARIKQEGG DRPYNLNFFAHRTPPADRAQQDAWFAVLRPYFEAYGLTENDIPTGGGRQPFDADALACVE RYRPPVVSFHFGLPAPEYLQRVKATGAEVWSSATTVEEAVWLEQNGADVVIAQAWEAGGH RGWFLNRNPDSQSGLFALLPAVRNAVRLPVIAAGGVSDAAAVRAALGLGATAVQVGTAFL LADEALTKPAHRAAIQTARPEDTVVTNLFSGGAARGLYNRFIREAGPMNDAALPFPLAGA AAGALKAAAEKQGCYDFSPFWAGQNAGLCSPGSAAEIVGRLCGGIER >gi|257257238|gb|ACDX02000010.1| GENE 66 73298 - 79882 8218 2194 aa, chain - ## HITS:1 COG:PM1570 KEGG:ns NR:ns ## COG: PM1570 COG5295 # Protein_GI_number: 15603435 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Pasteurella multocida # 439 1170 106 858 1299 159 29.0 9e-38 MNKIYRVVWNETTQTWNAVAEFAKAHGKTASSGIGGIVASAGVRFAFTAIMSGLLLASGQ VMAAENSGKTLANGKAISAATEGTDYNTCYFDTVSYNVVCGDDTTKALDFIPQTGGQPPK QGKSVSIGQGAQTSGESNVAIGPKTVTANTGSIAIGAAASANHNQSIAMGQEASAKGEAD VSIGKSAGDTVSSGGRNISIGESALKGGSGVNNVIAIGSAAGIDSNSSHSVYIGTGATGM DPKNVAIGNLSKTKGGSIAVGDSSNAQGSSSVAIGTSAATTGVAANGVAIGFNSTTSGLS AVAIGGSSSSGKGANASGPASLAIMGTAVASAQRAIAVGELALGSGSYGIAIGGKANAQG TSSIAIGGSQATDKATNATGNYSTAIGYGAKTVNHDTTAVGKSSSANGLRATAFGVDSNA DAENALAVGPQTAASAKGAIAVGFATQATGMSSVAVGKEAIATKETSTSLGQNSQATANN AIAIGNKAVAAGTGNIVVGTNAGVYDAAVSAGRTVGADTVYIGADSGRNAYTNERQISIG KGTGNNATGVDNIALGLRSGAFVVGANNVAIGKEAGMGTDAQKLNVTSTVAIGEAAKGSF NNTVAIGKTALAEKESAVAVGTLSKASGDNSVAIGKAANASGSKALALGVDSVAVNENDV ALGSGSLTDAHHSGNYTLNSNYTAAGTSSQGTVSVGKVDAATPANNFTRQIQNVSAGVIS ATSTDAINGSQLYATNSYLLNLGNNVKNALGGETAIDNAGNLTLNNLGGTGKANVHDALE AMNTKINQLGGGSSSHFYSVQTPSNARGNYNNDGATGLDALAAGADAQAAGEFAVAVGTG AQAVISNSIAIGKNATVNEDTTSNMDVNGLTKGEGSVAIGAYTKASGTNATAVGQSSNAY GQNSLAAGQSSKALGKSSVALGDGANATQDSASSLGPYSQATAAGATALGFNTRATAFAT VAAGRNSKAVANNAVAVGNEADAQKEDTIAIGYNAQATQNRAVAFGKNAQATAGDTFAFG DSAKASVGNAIAFGKNANAAHAGSIALGANSATEAAVQTTSATVGGLTFGNFAGNAPEST LSIGTAGKERTITNVAAGRISNNSTDAINGSQLYATQNVMNNIGTTAVGVLGGNATIAND GTIKMTNIGGTGASTIEGAISAINNASYKSFKLNTAKTSGTNGEANNHSLKEITNGSTIT LEAGKNIVLNQNESTVSINTADAPEFAGKITAKGGLDMSNTKITNLGKGDQPTDAVNLSQ LTDAINNVRATTLTTVTNDAPFAYVSDDGRILKRNVTVDGSGVKKVSFVYADDANTSYNG AVTIAALNPTDPQTTVPTQVGNIAAGKGQNDAVNVSQLDKVAKALGTSVNSATGEIAAPK YSVISGSPATSGVADYNDVGTALTALSNAVRAPLTFAGDSGTPSTRQLGSTVTVKGGEAD ATKLSDSNNIGVVSDDANGTLNVKLAKELQGLNSAHFETDGNVTTINGGNVSLADKDGNI AETTANGITLTPVPSSGKEAVSLTKDGLNNGGNKITKVAKGTDGTDAVNVAQLNEQLAAT EKTTTVAAGKNVTVSEKVDGNNTEYTVNADKTTLSQAANGAVKVSEGAKDADGVTDYALD LTDEAKADIAKGVAAKDAVDNKGLTFAADNGTTGAKKLGDSLSVKGDGNILTRADENGIG FSLADTVKIGQDSGKPVSIDGVNGTVSGLSNKALGGADFATKGQAATEEQLNAAQANLAN LLGGNAANNNGNVTFTDIGGTGKANVHDAIAAVKETAEKGWNLKANDETSSEKIAAGDTV TFKEGKNIKVSRDGKNITVATSDDVSFNKVTVGDKVALSKDGLKAGDVNITADGIDAGNK AISNVAKGVKATDAVNVAQLNEQLAATEKTTTVVAGKNVTVSEKVDGNNTEYTVNADKTT LSQAAGGAVKVSEGAKDADGVTDYALDLTDEAKADIAKGVAAKDAVDNKGISFAGDSGMT VANKLGDTVAVKGDVNITTTAGANGIQVGLNKDLKVDSVKAGDTVVNNNGVNVGDKVALG KDGLKAGDVNITAEGINAGGKKVTGVAAGTVAADSTDAVNGSQLYQANQAINQSVTNIGN YVVNMGDQINQRIDNVESDSKAGTAAAMAVAGLPQAYLPGKSMMAVAGGVYRGESGYAVG FSSISDGGNWVIKGTATGNSRGHYGATAGVGYQW >gi|257257238|gb|ACDX02000010.1| GENE 67 80609 - 80857 430 82 aa, chain + ## HITS:1 COG:NMA0256 KEGG:ns NR:ns ## COG: NMA0256 COG5007 # Protein_GI_number: 15793274 # Func_class: K Transcription # Function: Predicted transcriptional regulator, BolA superfamily # Organism: Neisseria meningitidis Z2491 # 1 82 1 82 82 131 92.0 2e-31 MLTPEQVKSLIEGVAACEHVEVEGDGHHFFAVIVSSEFEGKARLARHRLIKDGLKAQLAS NELHALSISVAATPAEWAAKQQ >gi|257257238|gb|ACDX02000010.1| GENE 68 80976 - 82247 1951 423 aa, chain - ## HITS:1 COG:NMA0282 KEGG:ns NR:ns ## COG: NMA0282 COG2837 # Protein_GI_number: 15793299 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted iron-dependent peroxidase # Organism: Neisseria meningitidis Z2491 # 8 412 5 410 421 706 84.0 0 MSQDNNPQPAQPTKRTLFKTVLAAGAAGAAGWFAGKQQGETAAETRHNEHSPQAYPCYGT HQAGITTPHQLFGIMCAFDVTAKDPKQLENLFRTLTARIEFLTQGGEYQDGDEKLPPAGS GLLGKTFRPDGLTITVGVGSSLFDDRFGLKDKKPRHLQEMRDFPNDRLQKSWCDGDLSLQ ICAFTPETCQAALRDIIKNTAQTAVIRWSIDGWLPKAEPGAIAARNLLGFRDGSGNPDVS DPKIADQVLWTGIAANSQDEPAWTKNGSYQAVRLIRHFVEFWDRTPLQEQTEIFGRRKYS GAPMDGKKESDTADFAKDPDGKTTPKDSHMRLANPRDPEFMKKHLLYRRAFNYSRGLAAN GQLDVGLVFICYQANLADGFIFVQNLLNGEPLEEYISPFGGGYFFILPGVEKGGFLAQTL LSV >gi|257257238|gb|ACDX02000010.1| GENE 69 82486 - 83658 2055 390 aa, chain - ## HITS:1 COG:NMA0281 KEGG:ns NR:ns ## COG: NMA0281 COG2822 # Protein_GI_number: 15793298 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted periplasmic lipoprotein involved in iron transport # Organism: Neisseria meningitidis Z2491 # 1 390 1 388 388 606 85.0 1e-173 MKKLNITALSVMLALGLTACQPPEAEKSAPAASGASGASSANAGGTVNVAVNDTACEPME LTVPSGQVVFNIKNNSGRKLEWEILKGVMVVDERENIAPGLSDKMTVTLLPGEYEMTCGL LTNPRGKLVVTDSGFKDTGNEADLEKLAKPLADYKVYVQGEAKELVAKTKAFTDAVKAGD IEKAKSLFAATRTHYERIEPIAELFNELDPAIDAREDDFKDKTEDAAFTGFHRIEHALWV KKDVSGVKDIADKLMKDVESLQKEIDALSFPPNKVVGGAAVLIEEVAGSKISGEEDRYSH TDLSDFQANIEGAQKIVELFRPMIAEKNKALLEKVDANFKQVIDILAKYKTKDGFETYDK LSDADRKTLQAPINALAEDLSQLRGTLGLK >gi|257257238|gb|ACDX02000010.1| GENE 70 83713 - 84549 870 278 aa, chain - ## HITS:1 COG:NMA0280 KEGG:ns NR:ns ## COG: NMA0280 COG0672 # Protein_GI_number: 15793297 # Func_class: P Inorganic ion transport and metabolism # Function: High-affinity Fe2+/Pb2+ permease # Organism: Neisseria meningitidis Z2491 # 1 269 1 269 279 437 89.0 1e-122 MLIAFLIMLREGIEAALIVGIVAGFLKQSGHSRLMPKVWLGVALAALMCLGIGYGIHSAT GEIPQKEQEFVVGVIGLVAVAMLTYMILWMKKAARSMKQQLQDSVQTALNRGNGQGWALV GMAFLAVAREGLESVFFLLAVFQQSPTWSMPVGAVLGLLTAVVIGALIYQGGMRLNLAKF FRWTGAFLIVVAAGLVAGSLRALHEAGVWNHLQEVVFDSSKYLHEDSPLGVLLGGFFGYT DHPTQGEVLAWLLYLVPVMIWFLHGSRPAAVQRSSESH >gi|257257238|gb|ACDX02000010.1| GENE 71 85047 - 86369 2125 440 aa, chain + ## HITS:1 COG:NMA0279 KEGG:ns NR:ns ## COG: NMA0279 COG2821 # Protein_GI_number: 15793296 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-bound lytic murein transglycosylase # Organism: Neisseria meningitidis Z2491 # 1 440 1 441 441 721 81.0 0 MKKHLYRITLLTIAAAILSACPSKRIKKLPEVDTTTIKGPDRPTGTPDPVGTTVSGGGAT YTVVSHQELPHWSTQHFTKSLQSFRLGCEKLKNRAGWQDVCAQSMQTPVHHFQAKYFFER YFTPWQVSNNGNPAGTITGYYEPVLLGDDKATSKARFPIYGIPNDFVSVPLSANLRNSKA TVRIRQTGANSGVIDNSGTHTADLSQFPITARSTALKGRFEGSRFVPYYTRNQINGGALN GKAPILGYAEDPVELFFMHIQGSGRLKTPSGKYIRVGFADKNEHPYVSIGRYMADKGYLP LAQTSMQGIKAYMKQNPGRLAEVLGQNPSYVFFRELTGSSEAGPVGALGTPLLGEYAGAI DRHYITLGAPLFVATAHPTTKKALNRLIMAQDTGSAIKGAVRVDYFWGYGDEAGEVAGKM KTTGYVWQLLPNGMKPSYQP >gi|257257238|gb|ACDX02000010.1| GENE 72 86799 - 87263 530 154 aa, chain - ## HITS:1 COG:NMB0309 KEGG:ns NR:ns ## COG: NMB0309 COG2954 # Protein_GI_number: 15676227 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 1 154 1 154 158 224 70.0 5e-59 MTIEIERRFLLKNDDWKLEASAPQVLQQGYLSVEKERTIRVRIIDDKAWLTLKGYISDVS RSEFEYEIPLAHARQMMETMCPFKMEKHRYRVEFKGFVFEIDEYFGDNAPLVVAEVELPV EDAPFEKPDWLGAEITSEGKFTNAYLSKHPYSTW >gi|257257238|gb|ACDX02000010.1| GENE 73 87318 - 87743 342 141 aa, chain - ## HITS:1 COG:NMB0310 KEGG:ns NR:ns ## COG: NMB0310 COG1981 # Protein_GI_number: 15676228 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis MC58 # 1 141 2 142 142 178 68.0 3e-45 MYLWFKLLHVFFVISWFAGLFYLPRIFVNLAQVEAAEQPVEYERLSAMARRLYKFMSPLG FGTLVCGMVIPFVTGWWGQGWLHVKLLMGLLLLAYQFYCGALLRGFEEKRNTHSHKWYRV FNEVPVLMMVVALYMVVFKPF >gi|257257238|gb|ACDX02000010.1| GENE 74 87965 - 88282 233 105 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|255068621|ref|ZP_05320476.1| ## NR: gi|255068621|ref|ZP_05320476.1| conserved hypothetical protein [Neisseria sicca ATCC 29256] conserved hypothetical protein [Neisseria sicca ATCC 29256] # 1 68 1 68 91 111 88.0 1e-23 MIKQFEISTSVQKQLGDYLAANQTDLKTAMADETRNGEVAAIIHAGLPMMVRKIYSLEKN EKLLLDEKRTDGRIRSHAPCHRRKEKRQEKTLSRCGILRKRLKVV >gi|257257238|gb|ACDX02000010.1| GENE 75 88545 - 88872 388 109 aa, chain + ## HITS:1 COG:NMB1602 KEGG:ns NR:ns ## COG: NMB1602 COG3547 # Protein_GI_number: 15677452 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Neisseria meningitidis MC58 # 16 108 6 98 372 167 96.0 5e-42 MQGRFMMSTQHNYAGIDIAKRNFVIAVSSLSKTKTETNNPKGIAHTIEYLKKHNVALVVM ESTGGLEIPAAKAIHHAGIAVIIANPRQTHQFAQSQSLTKTDAKDAKML Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:02:28 2011 Seq name: gi|257257235|gb|ACDX02000011.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont10.1, whole genome shotgun sequence Length of sequence - 84219 bp Number of predicted genes - 78, with homology - 76 Number of transcription units - 46, operones - 16 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 3247 - 3306 1.5 2 2 Tu 1 . + CDS 3379 - 3591 158 ## + Term 3695 - 3737 2.8 3 3 Tu 1 . - CDS 3771 - 7412 3624 ## COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) - Prom 7588 - 7647 4.1 4 4 Tu 1 . - CDS 7758 - 9035 1785 ## COG2873 O-acetylhomoserine sulfhydrylase - Term 9062 - 9112 13.1 5 5 Tu 1 . - CDS 9124 - 11889 4159 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit - Prom 11919 - 11978 3.5 - Term 12003 - 12050 13.6 6 6 Op 1 4/0.071 - CDS 12071 - 12631 921 ## COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) 7 6 Op 2 . - CDS 12673 - 13824 845 ## COG4394 Uncharacterized protein conserved in bacteria 8 6 Op 3 . - CDS 13873 - 14151 349 ## NLA_13260 hypothetical protein 9 6 Op 4 . - CDS 14189 - 15133 1487 ## COG1092 Predicted SAM-dependent methyltransferases - Prom 15215 - 15274 3.4 + Prom 15176 - 15235 5.4 10 7 Tu 1 . + CDS 15471 - 16844 1774 ## COG0513 Superfamily II DNA and RNA helicases + Term 16906 - 16946 7.5 - Term 16892 - 16934 4.1 11 8 Tu 1 . - CDS 17004 - 17498 261 ## Sterm_3798 hypothetical protein - Prom 17576 - 17635 13.1 - Term 17748 - 17785 8.0 12 9 Op 1 11/0.000 - CDS 17806 - 18084 364 ## COG2919 Septum formation initiator 13 9 Op 2 . - CDS 18101 - 19387 1754 ## COG0148 Enolase - Prom 19424 - 19483 3.8 14 10 Tu 1 . - CDS 19531 - 19800 96 ## gi|288575993|ref|ZP_06394106.1| putative deoxyguanosinetriphosphate triphosphohydrolase + Prom 20063 - 20122 7.0 15 11 Tu 1 . + CDS 20152 - 21615 2436 ## COG0516 IMP dehydrogenase/GMP reductase + Term 21624 - 21673 15.2 - Term 21612 - 21661 13.6 16 12 Tu 1 . - CDS 21687 - 23594 2613 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains - Prom 23619 - 23678 5.5 - Term 23654 - 23704 14.1 17 13 Op 1 2/0.357 - CDS 23714 - 24199 799 ## COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 18 13 Op 2 2/0.357 - CDS 24278 - 25012 868 ## COG1729 Uncharacterized protein conserved in bacteria 19 13 Op 3 . - CDS 25017 - 25685 587 ## COG4122 Predicted O-methyltransferase 20 13 Op 4 . - CDS 25696 - 25881 270 ## NMO_1274 hypothetical protein - Prom 25930 - 25989 5.6 - Term 25952 - 26000 12.7 21 14 Tu 1 . - CDS 26016 - 27353 1709 ## COG2704 Anaerobic C4-dicarboxylate transporter - Prom 27505 - 27564 7.8 + Prom 27489 - 27548 3.9 22 15 Tu 1 . + CDS 27677 - 28963 970 ## NGK_1223 periplasmic protein + Term 28987 - 29034 12.3 23 16 Tu 1 . + CDS 29322 - 29762 387 ## COG3536 Uncharacterized protein conserved in bacteria + Term 29859 - 29901 3.2 + Prom 29863 - 29922 3.0 24 17 Tu 1 . + CDS 29945 - 30682 326 ## PROTEIN SUPPORTED gi|163754278|ref|ZP_02161401.1| 30S ribosomal protein S15 + Term 30717 - 30752 3.8 - Term 30703 - 30740 3.0 25 18 Op 1 23/0.000 - CDS 30798 - 31484 231 ## PROTEIN SUPPORTED gi|225084369|ref|YP_002657150.1| ribosomal protein S16 26 18 Op 2 . - CDS 31477 - 32727 976 ## COG4591 ABC-type transport system, involved in lipoprotein release, permease component + Prom 32722 - 32781 3.4 27 19 Tu 1 . + CDS 32941 - 33225 387 ## NLA_10420 periplasmic protein + Term 33263 - 33310 14.3 - Term 33255 - 33292 8.0 28 20 Op 1 2/0.357 - CDS 33318 - 33938 463 ## COG0353 Recombinational DNA repair protein (RecF pathway) - Term 33963 - 33994 2.4 29 20 Op 2 2/0.357 - CDS 34015 - 35550 1300 ## COG0760 Parvulin-like peptidyl-prolyl isomerase 30 20 Op 3 . - CDS 35632 - 35985 300 ## COG1393 Arsenate reductase and related proteins, glutaredoxin family - Prom 36045 - 36104 4.8 + Prom 35925 - 35984 7.0 31 21 Tu 1 . + CDS 36106 - 36963 821 ## COG0354 Predicted aminomethyltransferase related to GcvT + Term 36981 - 37032 15.6 + Prom 37012 - 37071 2.7 32 22 Tu 1 . + CDS 37096 - 39096 2884 ## COG0210 Superfamily I DNA and RNA helicases + Term 39324 - 39372 -0.3 - Term 39880 - 39938 2.3 33 23 Op 1 . - CDS 40047 - 40943 647 ## COG2801 Transposase and inactivated derivatives 34 23 Op 2 . - CDS 40912 - 41196 227 ## NLA_8450 transposase + Prom 41137 - 41196 4.5 35 24 Op 1 . + CDS 41226 - 41828 783 ## COG0223 Methionyl-tRNA formyltransferase 36 24 Op 2 7/0.000 + CDS 41821 - 42996 1597 ## COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis + Term 43005 - 43045 3.1 + Prom 43003 - 43062 2.5 37 24 Op 3 1/0.357 + CDS 43190 - 45082 2255 ## COG1086 Predicted nucleoside-diphosphate sugar epimerases 38 24 Op 4 6/0.000 + CDS 45171 - 46304 1596 ## COG1596 Periplasmic protein involved in polysaccharide export + Term 46340 - 46377 -0.9 + Prom 46409 - 46468 5.0 39 24 Op 5 3/0.143 + CDS 46501 - 46920 449 ## COG0394 Protein-tyrosine-phosphatase 40 24 Op 6 . + CDS 46969 - 49161 2799 ## COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis + Term 49190 - 49227 8.0 - Term 49341 - 49369 -1.0 41 25 Op 1 23/0.000 - CDS 49511 - 50206 982 ## COG1346 Putative effector of murein hydrolase 42 25 Op 2 . - CDS 50219 - 50671 531 ## COG1380 Putative effector of murein hydrolase LrgA + Prom 50622 - 50681 3.6 43 26 Tu 1 . + CDS 50713 - 51597 1328 ## COG0583 Transcriptional regulator + Prom 52041 - 52100 4.2 44 27 Op 1 . + CDS 52120 - 53247 1295 ## COG0673 Predicted dehydrogenases and related proteins 45 27 Op 2 . + CDS 53244 - 53903 871 ## COG0778 Nitroreductase + Term 54013 - 54064 14.5 - Term 54002 - 54051 14.9 46 28 Op 1 . - CDS 54069 - 55151 1498 ## COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase - Prom 55221 - 55280 3.6 47 28 Op 2 . - CDS 55347 - 55520 143 ## NMB0417 hypothetical protein 48 28 Op 3 . - CDS 55537 - 55761 70 ## gi|284799411|ref|ZP_06390128.1| hypothetical protein NEISUBOT_03126 - Prom 55886 - 55945 3.7 - Term 55792 - 55826 0.6 49 29 Op 1 . - CDS 55968 - 57335 1565 ## COG0770 UDP-N-acetylmuramyl pentapeptide synthase 50 29 Op 2 . - CDS 57367 - 58380 801 ## NLA_4650 hypothetical protein 51 29 Op 3 . - CDS 58434 - 58955 617 ## COG0739 Membrane proteins related to metalloendopeptidases - Term 59075 - 59127 13.1 52 30 Op 1 26/0.000 - CDS 59142 - 60620 1683 ## COG0769 UDP-N-acetylmuramyl tripeptide synthase 53 30 Op 2 2/0.357 - CDS 60645 - 62393 1771 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 54 30 Op 3 2/0.357 - CDS 62484 - 62747 304 ## COG3117 Uncharacterized protein conserved in bacteria 55 30 Op 4 29/0.000 - CDS 62803 - 63756 351 ## COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis 56 30 Op 5 . - CDS 63753 - 64208 495 ## COG2001 Uncharacterized protein conserved in bacteria + Prom 64481 - 64540 6.7 57 31 Tu 1 . + CDS 64560 - 65717 1517 ## COG1565 Uncharacterized conserved protein + Term 65754 - 65799 12.6 + TRNA 65887 - 65963 87.8 # Met CAT 0 0 + TRNA 65970 - 66045 90.1 # Ala GGC 0 0 - Term 66217 - 66266 8.2 58 32 Tu 1 . - CDS 66287 - 67291 1510 ## COG0167 Dihydroorotate dehydrogenase - Prom 67317 - 67376 2.7 + Prom 67362 - 67421 4.2 59 33 Tu 1 . + CDS 67447 - 68097 703 ## COG0546 Predicted phosphatases + Term 68135 - 68185 6.8 60 34 Tu 1 . - CDS 68197 - 69027 745 ## Asuc_0907 hypothetical protein - Prom 69254 - 69313 8.9 + Prom 69260 - 69319 5.0 61 35 Tu 1 . + CDS 69355 - 70470 1587 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component + Term 70481 - 70542 6.3 + Prom 70742 - 70801 3.6 62 36 Op 1 33/0.000 + CDS 71036 - 72082 1185 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component + Term 72087 - 72136 8.2 63 36 Op 2 14/0.000 + CDS 72153 - 73376 1419 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 64 36 Op 3 1/0.357 + CDS 73389 - 74156 303 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 74314 - 74344 3.6 + Prom 74186 - 74245 2.4 65 37 Tu 1 . + CDS 74386 - 74817 885 ## COG3794 Plastocyanin + Term 74836 - 74883 9.5 - Term 74819 - 74876 16.7 66 38 Tu 1 . - CDS 74897 - 75793 1141 ## COG0583 Transcriptional regulator - Prom 75822 - 75881 6.9 + Prom 75809 - 75868 3.6 67 39 Op 1 2/0.357 + CDS 75917 - 76318 708 ## COG2259 Predicted membrane protein 68 39 Op 2 . + CDS 76415 - 77020 879 ## COG3560 Predicted oxidoreductase related to nitroreductase + Term 77043 - 77089 10.1 - Term 77031 - 77077 12.4 69 40 Tu 1 . - CDS 77102 - 77374 395 ## COG2924 Fe-S cluster protector protein - Prom 77612 - 77671 79.2 + Prom 77056 - 77115 2.0 70 41 Tu 1 . + CDS 77240 - 77485 56 ## + Term 77660 - 77704 -0.8 + TRNA 77594 - 77669 97.8 # Phe GAA 0 0 + Prom 77936 - 77995 2.7 71 42 Op 1 . + CDS 78099 - 78839 1003 ## PAU_01244 hypothetical protein + Term 78863 - 78893 1.0 72 42 Op 2 . + CDS 78947 - 80386 2319 ## plu3514 hypothetical protein + Term 80408 - 80451 9.3 - Term 80389 - 80445 11.1 73 43 Op 1 . - CDS 80476 - 80691 179 ## NMCC_2088 integral membrane protein 74 43 Op 2 . - CDS 80684 - 80899 396 ## NGK_2285 hypothetical protein 75 43 Op 3 . - CDS 80970 - 82313 2519 ## COG0137 Argininosuccinate synthase - Prom 82381 - 82440 2.8 - Term 82404 - 82461 12.1 76 44 Tu 1 . - CDS 82462 - 82980 317 ## gi|261365140|ref|ZP_05978023.1| putative membrane protein - Prom 83039 - 83098 3.3 + Prom 82755 - 82814 2.3 77 45 Tu 1 . + CDS 83049 - 83861 1063 ## COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA + Term 83926 - 83968 -0.8 78 46 Tu 1 . + CDS 84053 - 84218 94 ## NLA_8450 transposase Predicted protein(s) >gi|257257235|gb|ACDX02000011.1| GENE 1 2307 - 3242 752 311 aa, chain + ## HITS:1 COG:no KEGG:UMN179_02291 NR:ns ## KEGG: UMN179_02291 # Name: not_defined # Def: hypothetical protein # Organism: G.anatis # Pathway: not_defined # 4 307 1 304 304 174 36.0 5e-42 MNPLNLPSELPIARYRLHFTLTHDLQLPSYAASTLRGVFGHALLAAACTCDTPQTPHLPD CPYAQIFEPAPCADLPSSVRQSPPPPYLIETPLVAPTHFPAGAGYAFDLVLFGRARHSLP LIAAVFAQAFAKGLGANNAGKGELSGIAIQQADGSFLTISERGSPIALHDNHIRLPERYP AHAHIQLLTPLRIQQKGRILRETELTQAVFLRQLMRRYLTLAHLHWGNNANAAELSAQIG GQGVPPRLSWHEHRRFSNRQKQITPLSGAIGTWQLTDLPPAFSQMLYIGQWLHLGKETVF GNGQYRIIQAA >gi|257257235|gb|ACDX02000011.1| GENE 2 3379 - 3591 158 70 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIRGASLPTQGIAPKARADAVLIPDTWGKSSDEIVFLYLLFIQVLIPDTWGKSSDCARLK NSIIFSLLYS >gi|257257235|gb|ACDX02000011.1| GENE 3 3771 - 7412 3624 1213 aa, chain - ## HITS:1 COG:NMB0785 KEGG:ns NR:ns ## COG: NMB0785 COG1074 # Protein_GI_number: 15676683 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) # Organism: Neisseria meningitidis MC58 # 4 1211 2 1202 1204 1492 62.0 0 MPANASIPAFDPLSIPISSTNLIEASAGTGKTYGIAALFTRLVVLEQMPVESILTVTFTK AATAELKTRLRARLDEVLQALESVEDTDNLSDDLAAYCRDNHPGDVFITGLLKQALAQES RARLIVRLKAAIGQFDNAAIYTIHGFCQRILRDYAFLCRAPMDVELTEDNRDRLLIPAQD FWRDRIVNDPILAKLVFEHRQTPQTMLAAIQKFVSRPYLVFRRPETDLVAAQEKFRKTWE KVRSKLDALEETFWRIRPILNGQSYQEKTFKTVFFELQSASQSGALPSFSKTTAEKLPMF AVEALESKVKKGNTPNAAAFADLQILANLGADSAAITQAEEDTFTLLHLDLLDHLNASLS EQKKSKRERGFDDLLLDVYDALTDNPQADSLAQAVAQNWRIALIDEFQDTDPLQYEIFRK IFISQHKPLFLVGDPKQAIYSFRGADIYAYLQAAADAQHSYTLATNYRSHAKLINGIGAL FRCKNRPFVLDGIDYTEVGAARSESRLSPPRTAIQIRWLNGKDNEVLNKDILRRRASEYC ADEIAHTLNEAAEGRLKFKDRPVVSGDIAVLVRTFNEGVMVAKSLKARGIQSVLLSRESV FTTPEALALAALLDYWLNPGQIGSLRFVLSGTLFGYDAQALYQLNRNEAELLNWINTAAE SVSIWRKSGIYAALQYFSSLHGIETGLLARGDERGLTNFHQLLECLSEEEGQSLSPAALH QWLNDQISLAQDRSVGESGLLRLESDEALVKIVTMHASKGLQYPLVYCPFVWDAKDMKPA DWQILHTAAHTTELLAKSQLNDEDRIHLADEEMAERLRLLYVALTRAEEQLVLYAAHCGD TADSPFAYLLEGSADSNRADTRQAYDQERKANKALGELQMLKNNWLRFLKNPPEHTDFSF SEDAPQPAAAQNRHLSDDLYQAAVIPARGFQFIRHTSFTGLSRQVKTRDDEREELQPALD PAETAADTERSSENTLPVSDDLPNTDIHHFPRGANAGVCLHEMLEKFDFAQSAESQSSLI AETLTRYGFDLLWTDAVKQMLETCRKTRLAAQSLSEIPPERRLPEMGFTLYTEDFKLHDL RRWFARENSSLPPECIEAAERLDFQDVQGFLNGFIDMVCQDSDDLVCIIDYKSNHLGDNA EAYTQQAMNAAVADHHYYLQALIYAIAVARYFKLRGKPLPKIAIRYLFLRGLDGTDNGIW QWDLDTESLAQWL >gi|257257235|gb|ACDX02000011.1| GENE 4 7758 - 9035 1785 425 aa, chain - ## HITS:1 COG:PA5025 KEGG:ns NR:ns ## COG: PA5025 COG2873 # Protein_GI_number: 15600218 # Func_class: E Amino acid transport and metabolism # Function: O-acetylhomoserine sulfhydrylase # Organism: Pseudomonas aeruginosa # 1 412 1 412 425 566 67.0 1e-161 MKRETIALHAGYQSEPTTKSAAVPIYQTTSYTFDNTQHGADLFNLDVAGNIYTRIMNPTT AVLEERVARLEGGIAALAVASGMAAITYAVQTLVEAGDNIIATKTLYGGTYNFFAHSLPR QGIEVRFIDPAKPEEIAANTDSRTKLVYCESIGNPAINVVDIQAFAQASHAQGLPLMVDN TVATPTLFRPIEHGADIVIQSLTKYIGGHGTTIGGAIIDGGKFQWASNPRFDRTFNQPDP SYHGVNYCEHFGAAAYIARARVVPLRNTGAALSPHSAFLLLQGLETLALRMERHCENALK VAEFLKKHPQVEWVNYPALPDSPYKNLIDRDYGGKASGLLSFGIKGGREAGAKFIDALQL FLRLVNIGDAKSLATHPATTTHRQLDDTELAAAGVSPDMVRLSVGIEHIDDLLADLAQAL EAARV >gi|257257235|gb|ACDX02000011.1| GENE 5 9124 - 11889 4159 921 aa, chain - ## HITS:1 COG:NMB1384 KEGG:ns NR:ns ## COG: NMB1384 COG0188 # Protein_GI_number: 15677247 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Neisseria meningitidis MC58 # 1 913 1 914 916 1623 92.0 0 MTDATIRNDHKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAM HELKNNWNAAYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSMRYVLIDGQGNFGSV DGDGAAAMRYTEIRMAKIAHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPALLVNGSS GIAVGMATNIPPHNLTDTVNACLRLLDEPETEIDELINILQAPDFPTGATIYGLSGVREG YKTGRGRVVMRGKTHIEPIGKNGEREAIIIDEIPYQVNKAKLVEKIGELVREKTLEGVSD LRDESDKSGMRVVIELKRNENAEVVLNQLYKLTQLQDSFGINMVALVDGQPRLLNLKQIL SEFLRHRREVVTRRTLFRLKKARHEGHIAEGKAVALSNIDEMIRLIKESADAPEAKEKLL SRAWRSGLVEDMLSRTDLDLRMARPEGLPANLGLQEQGYYLSEIQADAILRMSLRNLTGL DQEEIVGDYKNIMAKIIDFLDILAKPERITQIIREELEETKTNFGDERRSEINPFGGDIA DEDLIPQREMVVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDY LMCFTNLGKCHWIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAVREFPEDQYVFFA TAQGMVKKVQLSAFKNVRSQGIKAIALKEGDCLVGAAQTSGSDDIMLFSNLGKAIRFNEY WEKSGNDEAEDADIETEISDDLEDETADNENALPSGKHGVRPSGRGSGGLRGMRLPADGK IVSLITFAPEAAQSDLQVLTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVAA TLVGETDDLMLITSGGVLIRTKVEQIRETGRAAAGVRLINLDEGEQLVSLERVAEEPEDA SASGEENTTEANVTTEDNTPQ >gi|257257235|gb|ACDX02000011.1| GENE 6 12071 - 12631 921 186 aa, chain - ## HITS:1 COG:NMB0937 KEGG:ns NR:ns ## COG: NMB0937 COG0231 # Protein_GI_number: 15676830 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) # Organism: Neisseria meningitidis MC58 # 1 186 1 186 186 351 99.0 5e-97 MKTAQELRAGNVFMVGNDPMVVQKTEYIKGGRSSAKVSMKLKNLLTGAASETIYKADDKF DVVILSRKNCTYSYFADPMYVFMDEEFNQYEIEADNIGDALKFIVDGMEDQCELTFYEGN PISVELPTIIVREVEYTEPAVKGDTSGKVMKTARLVGGTEIQVMSYIENGDKVEIDTRTG EFRKRA >gi|257257235|gb|ACDX02000011.1| GENE 7 12673 - 13824 845 383 aa, chain - ## HITS:1 COG:NMA1132 KEGG:ns NR:ns ## COG: NMA1132 COG4394 # Protein_GI_number: 15794078 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 383 1 382 382 714 91.0 0 MNTHVFPVCWIFCNVIDNFGDIGVSLRLARVLHHELGWQVHLWTDDVSALRALCPDLPDV PCVHQDIHIRTWHAEAADIDTAPVPDVVIETFACDLPENVLHIIRQHKPLWLNWEYLSAE ESNERLHLMPSPQEGVQKYFWFMGFSEKSGGLIRERDYRDAVRFDTEALRQRLMLPEKNA PEWLLFGYRSDVWAKWLDMWQQAGNPLTLLLAGTQIIDSLKQSGVIPQNALQNDGDVFQT TLVRLVKIPFVPQQDFDKLLHLADYAVIRGEDSFVRAQLAGKPFFWHIYPQDENVHLDKL HAFWDKAHGFYTPETASAHRRLSDDLNGGEALSATQRLECWQTLQQHQNDWRQGTEEWSR YLFEQPSAPEKLAAFISKHKKIR >gi|257257235|gb|ACDX02000011.1| GENE 8 13873 - 14151 349 92 aa, chain - ## HITS:1 COG:no KEGG:NLA_13260 NR:ns ## KEGG: NLA_13260 # Name: not_defined # Def: hypothetical protein # Organism: N.lactamica # Pathway: not_defined # 1 92 1 92 92 141 86.0 7e-33 MSKPLIIRWLVVCLIPLATLAVFVVNPPEDEAQHLINGIILACEATFLFKFILFETIKHH LKQEFDLKRQTMLLFIPIVLLIVYLFHYFGAF >gi|257257235|gb|ACDX02000011.1| GENE 9 14189 - 15133 1487 314 aa, chain - ## HITS:1 COG:NMB1367 KEGG:ns NR:ns ## COG: NMB1367 COG1092 # Protein_GI_number: 15677232 # Func_class: R General function prediction only # Function: Predicted SAM-dependent methyltransferases # Organism: Neisseria meningitidis MC58 # 1 314 40 353 354 597 92.0 1e-171 MTDITPFANRMGKNIKHLMKWAKRNGIEAWRIYDRDIPQFPFAVDVYGDQIHLQEYDTGW LMQPEEYEAWLAEVLEAVAFVTGFAPEQIHLKRRERQKGLLQYEKTGKTGDDFVITENGR KFWVNLDKYLDTGLFLDHRNTRKKVGETAAGKRFLNLFSYTGSFTVYAATGGAASSETVD LSNTYLDWAKRNFELNGISPEQHKIVRADVFQYLQNAAADGKQFDLIVMDPPSFSNSKKM LDILDIQRDHKKLIDGAMNLLASGGLLYFSNNLRSFVLDDSVSEQYAVKDISKQSVPDDF RNKKIHQCWEIRHK >gi|257257235|gb|ACDX02000011.1| GENE 10 15471 - 16844 1774 457 aa, chain + ## HITS:1 COG:NMB1368 KEGG:ns NR:ns ## COG: NMB1368 COG0513 # Protein_GI_number: 15677233 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Neisseria meningitidis MC58 # 1 455 1 460 462 813 93.0 0 MSIKFADLNLDKNILSAVRSEGYESPTPIQAQAIPFALEGRDIMASAQTGSGKTAAFLLP TLQRLTKRSEKPGKGPRALVLTPTRELAAQVEKNALAYAKNMRWFRTVSIVGGASFGYQT RALSKPVDLIVATPGRLMDLMQSGKVDFDRLEVLILDEADRMLDMGFIDDIETIVEATPT DRQTLLFSATWDGAVGKLARKLTKNPEVVEVERVDDQGKIEEQLLYCDDMRHKNRLLDHI LRDANIDQCVIFTSTKAMTEVIADDLYEKGFAANCLHGDMPQGWRNRTLMDLRKGRCKIL VATDVAARGIDVPTITHVINYDLPKQAEDYVHRIGRTGRAGRTGIAITFAEVNEYVKVHK IEKYIDRKLNEVTVEGMEPTRKRKPAGGKPKGKDGWGDRKSGGWRGDKKPGKEGFGGKSR GEGFKKEGFKKGGEGFKGKRKTNDSFSSKPSRPAKRG >gi|257257235|gb|ACDX02000011.1| GENE 11 17004 - 17498 261 164 aa, chain - ## HITS:1 COG:no KEGG:Sterm_3798 NR:ns ## KEGG: Sterm_3798 # Name: not_defined # Def: hypothetical protein # Organism: S.termitidis # Pathway: not_defined # 6 138 9 137 169 90 39.0 2e-17 MRYHFPISVDMFDFLTTGRFDYLEIGQTAEMILQMFPAPECVPKGLLVKKGWNIWLYGNI ELHFSDDRLTQIRADFQPGEPLNGGRWLSLNPWFFNHADKLDLYSTIAKLVQHRIDFIKI DTPSALILRLQSGVELMFEKFSGQRLFAFCKQKTTLPQWAHEPV >gi|257257235|gb|ACDX02000011.1| GENE 12 17806 - 18084 364 92 aa, chain - ## HITS:1 COG:NMA1496 KEGG:ns NR:ns ## COG: NMA1496 COG2919 # Protein_GI_number: 15794396 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation initiator # Organism: Neisseria meningitidis Z2491 # 1 92 1 92 92 135 77.0 3e-32 MKWVTVVLSIALAYCQYSLWFGKGSIGHTEELQEQLSVQEEKNQTLTLRNQFLAAEVDDL ANGQEAISEIARVELGYVQDGETYYRFIERSR >gi|257257235|gb|ACDX02000011.1| GENE 13 18101 - 19387 1754 428 aa, chain - ## HITS:1 COG:NMA1495 KEGG:ns NR:ns ## COG: NMA1495 COG0148 # Protein_GI_number: 15794395 # Func_class: G Carbohydrate transport and metabolism # Function: Enolase # Organism: Neisseria meningitidis Z2491 # 1 428 1 428 428 798 96.0 0 MSAIVDIFAREILDSRGNPTVECDVLLESGVMGRAAVPSGASTGQKEALELRDGDKSRYL GKGVLKAVEHVNNQIAQALIGIDANEQSYIDKIMIELDGTENKGNLGANATLAVSMAVAR AAAEDSGLPLYRYLGGVGPMALPVPMMNVINGGEHANNSLNIQEFMIMPVGAKSFREALR CGAEIFHALKKLCDGKGFPTTVGDEGGFAPNLNSHKEALQLMVEATEAAGYKAGDDVLFA LDCASSEFYKDGKYHLEAEGRSYTSAEFAEYLEGLVNEFPIISIEDGMDENDWEGWKLLT EKLGSKVQLVGDDLFVTNPKILAQGIEKGVANALLVKVNQIGTLSETLQAVDLAKRSRYA SVMSHRSGETEDSTIADLAVATNCMQIKTGSLSRSDRMAKYNQLLRIEEELAEAAYYSGK AAFYQLGK >gi|257257235|gb|ACDX02000011.1| GENE 14 19531 - 19800 96 89 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|288575993|ref|ZP_06394106.1| ## NR: gi|288575993|ref|ZP_06394106.1| putative deoxyguanosinetriphosphate triphosphohydrolase [Neisseria mucosa ATCC 25996] putative deoxyguanosinetriphosphate triphosphohydrolase [Neisseria mucosa ATCC 25996] # 1 89 1 89 89 161 100.0 2e-38 MVRIIESSGYHRLDNAALQPLKNILIYPKIRKDIEYYRLVKCSFESFFRRPSCLKQSILS KLPCPETSKTVKMRGCLSRYYFLCKPMLT >gi|257257235|gb|ACDX02000011.1| GENE 15 20152 - 21615 2436 487 aa, chain + ## HITS:1 COG:NMB1201_3 KEGG:ns NR:ns ## COG: NMB1201_3 COG0516 # Protein_GI_number: 15677074 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Neisseria meningitidis MC58 # 242 487 1 246 246 473 99.0 1e-133 MRIVEKAYTFDDVLLVPAHSTVLPRDVKLQTKLTREITLNLPLLSAAMDTVTEARLAISM AQEGGIGIIHKNMTPEMQARAVSKVKRHESGVVKDPITVAPTTLIREVLEMRAQRKRKMS GLPVVENGKVVGIVTNRDLRFENRLDLPVSAIMTPRERLVTVPEGTSIDEARELMHEHKV ERVLVLNEKDELKGLITVKDILKTTEFPNANKDSEGRLRVGAAVGTGGDTEERVKALVGA GVDVIVVDTAHGHSQGVIERVKWVKETYPHIQVIGGNIATAKAALDLVAAGADAVKVGIG PGSICTTRIVAGVGVPQLTAIHNVAEALKGTGVPLIADGGIRFSGDIAKALAAGAYSVML GGMFAGTEEAPGEIELYQGRSYKSYRGMGSLGAMSQGSADRYFQDKTDSTDKYVPEGIEG RVPYKGPIVNIIHQLTGGLRSSMGYLGCANIAEMHEKAEFVEITSAGMSESHVHDVQITK EAPNYHR >gi|257257235|gb|ACDX02000011.1| GENE 16 21687 - 23594 2613 635 aa, chain - ## HITS:1 COG:NMA1249 KEGG:ns NR:ns ## COG: NMA1249 COG0488 # Protein_GI_number: 15794184 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Neisseria meningitidis Z2491 # 1 635 1 636 636 1129 95.0 0 MNILSVENASFAVGHVALLDKTSFQLDSGEKIGLIGRNGAGKSSFLKILAGVQKLDDGQI IVQNNLKIVYVPQESFFDKEATVFDTVAEGLGEIRDLLRRYHRVSHDLEHNSDDVLLKEL NELQLEIEAKDGWKLDAAVKQTLGELGLPENEKIGNLSGGQKKRVALAQAWVQKPDVLLL DEPTNHLDIDAIIWLENLLKAFEGSLVVITHDRRFLDNIATRIVELDRGILRSYPGSFSK YSEKKAQELAVEAEHNRLFDKFHAQEEAWIRKGIEARRTRNEGRVRRLEELRRQRAERRN VQGQVNFKLDSGEKSGKIIAELEHASFAYGDKVIMDKFSAILQRGDKIGLIGPNGIGKTT FLKLILGELQPTYGRIRIGSKQEVAYFDQFRSALNENDTVFYTLGQGNDYVEIGGKKKHV MSYLEDFLFHPARAQSPVSSLSGGERNRLLLAKLFTRPANILVLDEPTNDLDIDTQELLE DLLRDYQGTVFLVSHDRMFLDNVITQSIVFEGQGRLKEYIGGYQDYIDAKSREEKIQTTS APKITAEPEKAKPKANRTVKLSYKEQRELDALPDEIAALETEQAEINAQLSDPEIFKDYE KAGALQNRAEEIETLLLEKLERWELLEAKQNGEAI >gi|257257235|gb|ACDX02000011.1| GENE 17 23714 - 24199 799 161 aa, chain - ## HITS:1 COG:NMB1439 KEGG:ns NR:ns ## COG: NMB1439 COG0041 # Protein_GI_number: 15677297 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase # Organism: Neisseria meningitidis MC58 # 1 160 1 160 161 227 91.0 9e-60 MAKIGIIMGSNSDWPVMQQAAQFLKEFGVEYEARVVSAHRTPDLMFEYAETARERGIKAI IAGAGGAAHLPGMVAAKTTVPVLGVPVPSKYLRGEDSLLSIVQMPKGVPVATFAIGEAGA ANAALFAISLLANEDPELAQKLADFRAKQEQTVLDMELPEA >gi|257257235|gb|ACDX02000011.1| GENE 18 24278 - 25012 868 244 aa, chain - ## HITS:1 COG:NMA1652 KEGG:ns NR:ns ## COG: NMA1652 COG1729 # Protein_GI_number: 15794546 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 231 1 225 238 203 48.0 2e-52 MKTNLLIRLLPIAFTAACTSVSSPSSDDIFSLPDIPDSPQKVSIPYPKLDEQTQIDHLGV QVARIEREMEAVNLRLQQIEQQNKIHSRPAKKTVSQRLDDQKLKKHYLENGGTAPTETDS LTLNETRLYERASKYYRSGNYRAAAAILKEADGGNGSDIARRNMYLLLQSQQRMGHCESV IEIGGRYANRFRSSPQAPDALFSIGQCQYQLQQKDIARNTWRKLIQSYPGSEAAKRAAIS IKQR >gi|257257235|gb|ACDX02000011.1| GENE 19 25017 - 25685 587 222 aa, chain - ## HITS:1 COG:NMB1441 KEGG:ns NR:ns ## COG: NMB1441 COG4122 # Protein_GI_number: 15677299 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Neisseria meningitidis MC58 # 1 222 1 222 222 346 77.0 1e-95 MTVRTSNTPAGLQDYLNTIGQAEHPVLAALRERTLSHRLGNMAIAREQAALLSWLAQLVR VEKYLEIGVFTGYSSTAVALALPEHGKVTACDINVTFTDIARETWRAAGVEHKISLYLQP ALLTLDDLIAQGEAESYDLALIDADKPPTPQYFERCLKLVRKGGIIAIDNVLLNGRVLHE GDEHSPPSLKILQTFNRSLPDDERIVPITLPVGDGLTLLLKK >gi|257257235|gb|ACDX02000011.1| GENE 20 25696 - 25881 270 61 aa, chain - ## HITS:1 COG:no KEGG:NMO_1274 NR:ns ## KEGG: NMO_1274 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 1 61 1 61 61 77 81.0 1e-13 MYHYKSEATQFLDKLIEDNPQLETQRLENRHLLWDVELNPQEQAEFEAAKVAKKPYTYYQ D >gi|257257235|gb|ACDX02000011.1| GENE 21 26016 - 27353 1709 445 aa, chain - ## HITS:1 COG:PM1434 KEGG:ns NR:ns ## COG: PM1434 COG2704 # Protein_GI_number: 15603299 # Func_class: R General function prediction only # Function: Anaerobic C4-dicarboxylate transporter # Organism: Pasteurella multocida # 4 445 1 437 437 548 75.0 1e-156 MSTMFFIQFAIVLVCILIGAQVGGIGLGVLGGVGLAVLAFGFHLEPTSPPIDVMLMIMAV VSAAASMQASGGLDYMIKIATRVLHRNPKYITFIAPAVTYLFTVLAGTGHVAYSVLPVIA EVSRRNGIRPSRPLTMAVIASQFAIVASPIAAAVIACVTYLEPQHITMADVLKVTVPSTI LGIGLACVFVNKLGKELKDDPHYQALLKDPEYVKANEKDSAEVSNAPVSKEAKLSVGIFL AAALLVVVMGAVPELRPTFQTEEGPKLMGMAHAIEIVMLSAAALIILLCKPDGNAITKGS VFHAGMRAVIAVFGVAWLGDTLMHGHLAEVKETVSHLVETAPWTFAFALFVLSVLVNSQG ATVATLFPIGISLGIPAPIIIGTFVAVNGYFFIPNYGPIIAAIDFDSTGSTKIGKFIFNH SFMIPGLLSMAFSLAFGLLLANYFF >gi|257257235|gb|ACDX02000011.1| GENE 22 27677 - 28963 970 428 aa, chain + ## HITS:1 COG:no KEGG:NGK_1223 NR:ns ## KEGG: NGK_1223 # Name: not_defined # Def: periplasmic protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 1 428 9 433 434 452 51.0 1e-125 MKSISIWLVILAGALGLFYYQQNRYFFSDDLIHPQAGQDRSSVESLSGLGYLNFLRAAAG LNSLSNSPVLERSARRHAKYLLINPEDGHDEKHRNNQFYTGYKPSDRARKAGYYFDGVHE NISTGEYRHQDGFKSTLVLHEQTDALMTAIYHRFSLLDQNIDEAGVAVEHGNGKTAVVFN QGNREFNHWCSLGRSYPEAGRRFYKNSCFNGSIVYADEIKNQTKSAYIAYPKGNFAAPDF YGEHPDPMPGYEFTGNPVSIAFSDDGGEVKMLSFKLYQGKNEIDKTKILDKYTDPNGQLT DKQFALFPLSPLEYDTAYRAVFEYSQNGKKQKAEWTFKTKKPDYPYFVVNGGETLAVKPD NIYFIHWKNHWCLRECEKITFRPRGDAKLEVLERKPGGFLVRLKGKTGTAVRLMPNEETE KAVVLLIE >gi|257257235|gb|ACDX02000011.1| GENE 23 29322 - 29762 387 146 aa, chain + ## HITS:1 COG:NMA0955 KEGG:ns NR:ns ## COG: NMA0955 COG3536 # Protein_GI_number: 15793912 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 7 126 10 129 130 171 66.0 4e-43 MTVNENNLIPTEIRLSKDRASLTLRYDTDEKTLSAEFLRVYSPSAEVRGHGVGQEVLQTG KASVTVADLEPVGNYALKITFSDGHNSGLYDWAYLHKLAHNYDVLWADYLRRMELAGASR IPSPDDLNAEPKSGHTCGSGGCGGRH >gi|257257235|gb|ACDX02000011.1| GENE 24 29945 - 30682 326 245 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163754278|ref|ZP_02161401.1| 30S ribosomal protein S15 [Kordia algicida OT-1] # 25 244 1 221 221 130 35 3e-29 MSDHKTHFGFSTVDENEKAGKVAEVFHSVAKNYDIMNDVMSGGLHRVWKHFTINTARLKK GDKVLDIAGGTGDLSRGWAKRVGKEGEVWLTDINSSMLTVGRDRLLNEGLILPVSLADAE KLPFPDNYFNLVSVAFGLRNMTHKDAALKEMYRVLKPGGTLLVLEFSKVYKPLEGVYDLY SFKLLPVMGKLIAKDADSYQYLAESIRMHPDQETLKQMMLDAGFDSVDYHNMSAGIVALH KGVKF >gi|257257235|gb|ACDX02000011.1| GENE 25 30798 - 31484 231 228 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225084369|ref|YP_002657150.1| ribosomal protein S16 [gamma proteobacterium NOR51-B] # 7 205 9 198 309 93 30 3e-18 MNNNIVLKCTNIGKSYQDGSLNVQVLKNLNLEVKEGEGISIIGSSGSGKSTLLHILGGLD KPSEGKITLMNQDISDMSQRQLGELRNNYLGFVYQFHHLLPEFSALENVMMPLLIGKKNK AEAETQAADMLEKVGLKQRILHRPSELSGGERQRAAIARALVTRPKCLLADEPTGNLDRK NAQNILDMMMDLKTELNTSLIVVTHDDELAMRFERVMTMQDGHLQSKA >gi|257257235|gb|ACDX02000011.1| GENE 26 31477 - 32727 976 416 aa, chain - ## HITS:1 COG:NMA1403 KEGG:ns NR:ns ## COG: NMA1403 COG4591 # Protein_GI_number: 15794315 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ABC-type transport system, involved in lipoprotein release, permease component # Organism: Neisseria meningitidis Z2491 # 1 416 1 415 415 683 82.0 0 MVSLETWIGLRYLRAKKRNGFMSFITMISIIGIALGVTALITVLSVMNGFQKEIRGQLLN VAPHAEIGYYDNGNGLGWQNLREIVKDKKEVLASAPYISDQALLANAGEVRGVQIRGILP SEEKNVVDYGKDMPAGSFDSLKPGNFDIILGEGLAQALGAEVGGKVTVITPEGNVTPAGV VPRLKQFNVVGLVKTGVYEVDNSLAMTHIQDAQVLYRLGENFGGLRLKLADPQNAPSFTA NLISPSKKDSIWVRDWTFNNRSYFEAVELEKRMMFIILTLIIAVAAFNLVSSLVMAVTEK QADIAILRTLGLAPSGVMKIFMVQGAFAGFFGTLIGVVCGVLLGWNVGKIVAFFEKLFGV HLINSQIYFIDYLPSDVNMRDVAVISCISLGLAFLATLYPSWRAAKTQPAEALRYE >gi|257257235|gb|ACDX02000011.1| GENE 27 32941 - 33225 387 94 aa, chain + ## HITS:1 COG:no KEGG:NLA_10420 NR:ns ## KEGG: NLA_10420 # Name: not_defined # Def: periplasmic protein # Organism: N.lactamica # Pathway: not_defined # 25 94 27 96 96 94 78.0 2e-18 MKISKILVLPIIAAGLALSANSYAKEIKISSNNTSYSDADVQKLAATAVGMGVKEPVSLN AGSGIVTVSGNSATTCTFKVGNGSSPQIQGVNCK >gi|257257235|gb|ACDX02000011.1| GENE 28 33318 - 33938 463 206 aa, chain - ## HITS:1 COG:NMB1237 KEGG:ns NR:ns ## COG: NMB1237 COG0353 # Protein_GI_number: 15677109 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Neisseria meningitidis MC58 # 3 200 5 202 206 308 75.0 7e-84 MSKSPDALTRLINALKVLPNVGPKSAQRMAHQLLQHKRQEAENLVEALQYALLQIQHCRM CNNFCESDLCEICSDANRDPRRLMIVHMPADVSNMETANCHDGLYFVLMGQVSPAQGMDI SHISLDKLVARLQNSEVEEIIIATNFTAEGDATAYVLAELFKPLPYKVSRLARGIPLGGE LEYVDAGTLAQAVYERRMLKTDSMEE >gi|257257235|gb|ACDX02000011.1| GENE 29 34015 - 35550 1300 511 aa, chain - ## HITS:1 COG:NMB1238 KEGG:ns NR:ns ## COG: NMB1238 COG0760 # Protein_GI_number: 15677110 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Neisseria meningitidis MC58 # 1 508 1 508 512 609 63.0 1e-174 MFHTVEKYKTPAQILLGLIALTFIGFGVETARNSGSDYIVKVGSEKISDHTLNNAVQAEQ AAGGGQSREAIFSGLVQRAYLKEGAKMMGIDVSMDQVKQAIVDDPAFHDANGKFSQALFT QYLSQRHMSEDQFIDDLREQFALQNLINLVQNGAIISDSQAEQLIKLTQSNRTIRSFTFR PETFAAQVKTDDATLQRYYESHKKDYLIPQAVKLEYVALNAAHLAEKQSISADEVKKAFD EEVAALPQNAPKLEFDKEKARIEAALKLKKASADFNAAKENLAEEAFNHPNSLDEAAKKL GLKIETSDQWLTQADAKAAGMPDALISAAFSEDVLKKKHNSDIINIDNNTVWVVRAKEVR EEKTAGFTEAKDKVQTAYVRSESVKLAEKKAQETLADLKAGKNVDLQWSPVEQLSAQDAR KSMPPEAYNELVKARPANGKPAFALLEGLPSPVIMEVQSIAAPENVSAQIPAAKQALVQN QSANIFSRLLQYLSKQIEQVQGSQKLDNSAE >gi|257257235|gb|ACDX02000011.1| GENE 30 35632 - 35985 300 117 aa, chain - ## HITS:1 COG:NMB1239 KEGG:ns NR:ns ## COG: NMB1239 COG1393 # Protein_GI_number: 15677111 # Func_class: P Inorganic ion transport and metabolism # Function: Arsenate reductase and related proteins, glutaredoxin family # Organism: Neisseria meningitidis MC58 # 1 116 1 116 124 135 60.0 2e-32 MIELYGITNCDTVKKARNWLAENNIVYEFSDFKKNAPSEAVIRQWLEQVSLEILLNKRGT TWRKLDDADRQAAENNLDGAVRLMAENPSLIKRPVLRKEGRVYVGFSVENYQKIFSE >gi|257257235|gb|ACDX02000011.1| GENE 31 36106 - 36963 821 285 aa, chain + ## HITS:1 COG:NMA1464 KEGG:ns NR:ns ## COG: NMA1464 COG0354 # Protein_GI_number: 15794366 # Func_class: R General function prediction only # Function: Predicted aminomethyltransferase related to GcvT # Organism: Neisseria meningitidis Z2491 # 1 280 2 282 288 355 64.0 4e-98 MQSRLPFFSVIRVGGEDRASFLHGQLSNDINHLPVNHACYATYNTPKGRVLANMIVLNRG EDLLLVMAADLAESIVKRLRMFVLRAKVEFTPLPDFAVVGMLDESCHATPPDSPNLSFEA LLDNGVYTIPLPHKGRLKIGEVAQLPEYDAQAENAWNLHEIRSGYPWISAATKETAVAQM LNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSGDSLEAAGVGVVSEDAEAGQI INTALTENGSLSLAVIKFSAAQSPLTDADGNVLKQEKLFFSVSEE >gi|257257235|gb|ACDX02000011.1| GENE 32 37096 - 39096 2884 666 aa, chain + ## HITS:1 COG:NMA1660 KEGG:ns NR:ns ## COG: NMA1660 COG0210 # Protein_GI_number: 15794554 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Neisseria meningitidis Z2491 # 1 664 2 668 671 1233 92.0 0 MKLNPQQQAAVKYLGGPLLVLAGAGSGKTGVITQKIKHLIVNVGYLPHTVAAITFTNKAA TEMQERVAKMLPKSQTRGLMICTFHSLGMKILREEANHIGYKKNFSILDSTDSAKIIGEL LGGTGKEALFKAQHQISLWKNDLKTPEDVLQTASNAWEEQIARVYASYQETLQSYQAVDF DDLIRLPAVLLQQNSEVRNKWQRRLRYLLVDECQDTNTCQFALMKLLTGAEGMFTAVGDD DQSIYAWRGANMENLRKMQEDYPQMKVIKLEQNYRSTARILKIANKVIENNPKLFTKKLW SQFGEGEIVKVVACQNEQHEADWVVSQIVKQKLVGGDKTQYADFAVLYRGNHQARIFEEA LRSARVPYQLSGGQSFFDKAEIKDVLSYLRLLANPNDDPAFLRAVTTPKRGIGDVTLGKL NTYAHEHECSLYEAAQTEEALALLNNTNRQHLQAFMDMFGSYRAKAETSEAGELINSLLK EIDYENHLLASEEGKAGEIKWRNVSDLTGWLERKGEQNGKNIIELAQTVALMTLLEGKSE EEVDAVKLSTLHASKGLEYPYVFLVGCEEGILPHNDSIEEDNVEEERRLMYVGITRAKRQ LTLTHCVKRKKQGTWQFPEPSRFIDEMPQEDIKILGRKGGEPIVSKEEGRSHLAGMLDML AAKGKG >gi|257257235|gb|ACDX02000011.1| GENE 33 40047 - 40943 647 298 aa, chain - ## HITS:1 COG:yi5B KEGG:ns NR:ns ## COG: yi5B COG2801 # Protein_GI_number: 16131429 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 27 293 2 277 283 221 45.0 2e-57 MLYARKGCLPKGVKSPQPKADRKGQSQTVQTLRAQHPLKYLLHIANLPKSSFYYHHQDRP DPDAADKALIAEIYERHKGRYGQRRIAAALDWNRKKVARLMKQMELKALIRAKKAYRHPA MGEISEHLLKRRFTAKKPNEKWLTDVTELKGSDGKLYLSPILDLFNREIIAYAMSRNANS DMVEEMLEKAAPRLTDKGTMLHSDQGVLYRTAGYRELLAQHSMVQSMSRKANCWDNAPME SFFAVLKTECFYRAGELTVDELMKQIDDYMDYYNRERCSLKLKKLSPVAYRTQLTQNA >gi|257257235|gb|ACDX02000011.1| GENE 34 40912 - 41196 227 94 aa, chain - ## HITS:1 COG:no KEGG:NLA_8450 NR:ns ## KEGG: NLA_8450 # Name: not_defined # Def: transposase # Organism: N.lactamica # Pathway: not_defined # 1 81 106 186 221 147 92.0 1e-34 MSKYTLHFKYQAVLHYLHIRSQQRTADHYGISRTHLRRWIRAYQEGGIGALEHPQSKTMT DHRKNPFIADKPDHEKHRQSLSKSCAICAQRLPT >gi|257257235|gb|ACDX02000011.1| GENE 35 41226 - 41828 783 200 aa, chain + ## HITS:1 COG:BMEI1418 KEGG:ns NR:ns ## COG: BMEI1418 COG0223 # Protein_GI_number: 17987701 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA formyltransferase # Organism: Brucella melitensis # 11 174 80 242 259 65 29.0 9e-11 MSNFWGAVQYDLGLSVLYWRKLRDEFLTTPHLGTINFHPALLPEYKGTGGYNLAIMDELS EWGSTAHYVDASIDTGEIIEVDRFPIDSSVETAQSLERKTMQALEPFAQRIIARAVEAQA KLPTTPNIGGRYVSRDAMEAMKQIHDGDDVEKKIRAFWFPPYDGAYVEIDGQKYTLINRQ LLEEVAPKDSTSLFAGKANA >gi|257257235|gb|ACDX02000011.1| GENE 36 41821 - 42996 1597 391 aa, chain + ## HITS:1 COG:NMA0638 KEGG:ns NR:ns ## COG: NMA0638 COG0399 # Protein_GI_number: 15793626 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis # Organism: Neisseria meningitidis Z2491 # 1 389 14 402 404 769 95.0 0 MLNTSLSPWPSFTQEEADAVSKVLLSNKVNYWTGTECREFEKEFAAFAGTQYAVALSNGT LALDVALKAMGIGAGDDVIVTSRTFLASASCIVTAGANPVFADVDLNSQNISAETIKAAL TPNTKAIIVVHLAGMPAEMDGIMDLAKEHDLWVIEDCAQAHGAKYKGKSVGSIGHVGAWS FCQDKIMTTGGEGGMVTTNDKELWSKMWSYKDHGKSYDAVYHREHAPGFRWLHESFGTNW RMMEMQAVIGRIQLKRMPEWTARRQAHAAKLAESLGKFASIRLIEVANYIEHAQYKFYAF VKPEHLKEGWTRDRIVNELNARKVPCYQGSCSEVYLEKAFDNTPWRPKERLKNAVELGDT SLMFLVHPTLTDDEIAFCKEHIEAVLSEATA >gi|257257235|gb|ACDX02000011.1| GENE 37 43190 - 45082 2255 630 aa, chain + ## HITS:1 COG:NMA0637 KEGG:ns NR:ns ## COG: NMA0637 COG1086 # Protein_GI_number: 15793625 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate sugar epimerases # Organism: Neisseria meningitidis Z2491 # 1 630 1 631 636 944 74.0 0 MNLETLLSLPRNVKKIFFVIHDLLMVFIAFWFAQSLKAQYSDEWTSMANWLAFGSTAFLT IALFVKLGLYRAVTRFVSTRVLTAAAFGSLISAVLFCLTTLIFERKLHLALPVVYFLLLV VCITSSRMILRAILTDRHKKQMVPVIIYGAGQSGRQLLEAIKQVNEYSAVAFVDDNPKIR RTVIYDLTVYGPDDIQSLIDRYGVEKILLAIPSSTQEERRRIIQNLEQYKCEVLTIPGMK DLVDGKIKVSALKKISVVDLLGRDPVAPRPELMGADITGKTVMVTGAGGSIGSELCRQIL KCRPSKLLLFELSEFSLYSIDKELRETQAATGSQIEVVPLLGSVQNKERLTSVMTAYGVE TVYHAAAYKHVPMVEFNTVEGIRNNVFGTLLCAQAAVESGVSTFVLISTDKAVRPTNTMG ASKRMAELCLQALAAEPNQYTRFCMVRFGNVLGSSGSVVPVFEKQIAEGGPITLTHQDIT RYFMTIPEAAQLVIQAGAMGKGGDVFVLDMGESVKIIDLAKQMITLSGLKLKDAQHPDGD IEIKITGLRPGEKLYEELLIGDEVQKTTHPRIMTASEVMLPWDKLNDIIIRMDLACANSD QQTLRALLLEAPAGFNPKDDICDLVWKQTH >gi|257257235|gb|ACDX02000011.1| GENE 38 45171 - 46304 1596 377 aa, chain + ## HITS:1 COG:ECs1139 KEGG:ns NR:ns ## COG: ECs1139 COG1596 # Protein_GI_number: 15830393 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protein involved in polysaccharide export # Organism: Escherichia coli O157:H7 # 1 375 1 370 379 318 44.0 1e-86 MKKQLALISLSLMALTACNSTTVIPGSTINTRNKAIIYDNGETVADTKFDKRVAIYPITF GLVEKMRKPPVLSQTNAVLERSKAAYRYHIGKGDVLNIMVWAHTDLNSPVQQSSPQSNQV SRGAWVDESGYITYPLVGKIQAQGKTIDELQNILTSRLKRYLKNPQVTINVTEFRSQRIS ISGAVGQAGQLPITNVPMTILDAVNQAGGVAQNADTQHIKWTHNGVDRTISLQDIMQYGD MSQNHLLSNGDIVYVPNNSNSKVYIMGEVGRQATLPIGNHGLNLTQALGEAGGMNQTQAD ATGVFVIRRAPEDAVKPIHIYQLNLKDATAYALGNDFDLRPNDIVYVTAAPVTRWNRVVS QITSFVTNVNSIDSTFK >gi|257257235|gb|ACDX02000011.1| GENE 39 46501 - 46920 449 139 aa, chain + ## HITS:1 COG:ECs2866 KEGG:ns NR:ns ## COG: ECs2866 COG0394 # Protein_GI_number: 15832120 # Func_class: T Signal transduction mechanisms # Function: Protein-tyrosine-phosphatase # Organism: Escherichia coli O157:H7 # 1 136 10 145 147 129 44.0 2e-30 MGNICRSPTAERILQKKLPNHRISSAGINALAGKDADFQAIKTALKHGVIVAGHTARQLT PQMCDEADLILVMEPAHIDMVADIQPSARSKAFLLAQWLPKKNIPDPFKQSSEMFEAVFL QIEQAADTWADKLSGQAEQ >gi|257257235|gb|ACDX02000011.1| GENE 40 46969 - 49161 2799 730 aa, chain + ## HITS:1 COG:STM2116_1 KEGG:ns NR:ns ## COG: STM2116_1 COG3206 # Protein_GI_number: 16765446 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized protein involved in exopolysaccharide biosynthesis # Organism: Salmonella typhimurium LT2 # 3 478 4 479 479 322 39.0 2e-87 MYKQYPSSAPAGNDEIDFGQQMQSLWQNKNKIAAAILAGGLAGAVIGLASTPLYRADAML EIETKQNQILTEINNMLSNEPAPSEAEVELVQSRLVLGKTVEDLQLDQEVKATYFPIFGN MVHNLSGSDDPMLKIGAFTVSEDWINKPFKLTVKDSKTYLLTLPDGTTKEGRVGAPLKVN NETVLKVDRILAEAEQDFELTKFSKLSAIENLKNKLSVISKGKTSPIINLSYTDTDPKKT STILNSIADNYVSQNRERDVQVASSGLAFISEELPRLKETLQDAENKLNAYRERSGSLDI PLESKGALESLTSIETQITLLKTEEAGLAELYTPEHPSYKAVLDKLAVLERAKSKINQQI AGLPNTQQEVIRLTRDVETNQATYVQLLAKQQELNIMKASAQGNVRVVDHAYTPEKPIAP RKAVIAALGALAAGALASMWFLLQGRMRRGITSSEEIEALDLEVSALIPHSKTQQKRDLI KRKFKSLKGRSNYLLANEDSTDIAVEAIRALRTNIYFSMLDARNNILMITGATPEAGKSF ISANLATVMAQSGKRILLIDTDMRKGYLDQLLNVTPEFGLSDILSGEVSPAQAVTQTNIP NLHLISTGNYPKNPSELLMDNRFKELLSNAQKRYDYVIIDTPPVLAVTDAVVVGQHAGTV LLVSRYGNTTTKELAISAERLRQNKITIKGVILNGMKREANSTYDYYYSYITPTEGKKNA KKTTSEKPKA >gi|257257235|gb|ACDX02000011.1| GENE 41 49511 - 50206 982 231 aa, chain - ## HITS:1 COG:BMEI1596 KEGG:ns NR:ns ## COG: BMEI1596 COG1346 # Protein_GI_number: 17987879 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative effector of murein hydrolase # Organism: Brucella melitensis # 12 226 21 235 235 138 37.0 1e-32 MDYAALACFVWTCFAYFVAKKIYRKKPLMIFSPVVTVSVSTIVLMLLLGISYDTYHKYTQ GIVFLLTPVTVAFAIPIYENREVIRHQLPILSIAILVGMFVGVASAFLMGNMFRFDSEVT NSLMARSISTPFAVVLASEIHGSASLVSLFTIITGFVGMIFGDLFLAFTRIRFHTANGVA FGNAAHGFGTSRAGQRHETEGVMASLTMILAGLFMVIIGPSMVHLVVWVMG >gi|257257235|gb|ACDX02000011.1| GENE 42 50219 - 50671 531 150 aa, chain - ## HITS:1 COG:BMEI1597 KEGG:ns NR:ns ## COG: BMEI1597 COG1380 # Protein_GI_number: 17987880 # Func_class: R General function prediction only # Function: Putative effector of murein hydrolase LrgA # Organism: Brucella melitensis # 32 143 2 113 117 80 41.0 1e-15 MRKPRPYNQAFVLNYGLMNLMDTLTRFFQTTLQLAVVGLVWLVSDLMVRFAHLPISSGVL GLFLMLALLGSGVIKTGMVERGAKWVLGELVFFFIPIMVSVLQYRDLLISEGWQLVLTIA VGTALVMISTALTLNFCYRWKRRLYKKLHA >gi|257257235|gb|ACDX02000011.1| GENE 43 50713 - 51597 1328 294 aa, chain + ## HITS:1 COG:BS_ywbI KEGG:ns NR:ns ## COG: BS_ywbI COG0583 # Protein_GI_number: 16080882 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Bacillus subtilis # 1 286 1 286 301 190 34.0 3e-48 MDFKSLHCFAELVRLQSFSAAASALNLTQPTVSKTIQALEEELGVPLLVKENGRKKRQVA TTPIGEEVYRHALNLLHERDLLLARIDSYRHIKSGTLRLGLALLGSDLLSNALFRFRRQW PGIELTFLEQGSLAIEQSLRNNELDAGQLLAPVHEDFDSITLCDYPLVVLMPRAQARHAA LSLKSLQHEPFILFGSGFSLNETIQTACRSQGFTPNVVCRTGQWDLLADMVAHHMGIALL PEYYARKINPDTFAAVPLSEPEIRWQLTMAWKKHQRPTPALRAWLDIVREEFRK >gi|257257235|gb|ACDX02000011.1| GENE 44 52120 - 53247 1295 375 aa, chain + ## HITS:1 COG:TM0585 KEGG:ns NR:ns ## COG: TM0585 COG0673 # Protein_GI_number: 15643351 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Thermotoga maritima # 9 352 2 351 360 220 36.0 3e-57 MSEPISDRKIKFALVGCGRISNNHFGSFEVLQEDCELVAVCDIDTAALEAAVKRTGAKGY ARYTEMLAETDADVIVITTPSGLHPEQAVEALEAGFHVVTEKPMATCFTDGERMVQAADK AGKRLFVVKQNRLNATLQLLKRAVTEQRFGKIYMVHLNVFWTRPQSYYDQGGGWRGTWKL DGGAFMNQASHYVDLMEWLIGPVEDVQAMISTHRNIEAEDTGVMNIRWRDGTLGSMAVTM CTYPKNLEGSITILGETGTVRIGGMAVNEIQEWNFADERDYDEQVKTANYETTSVYGFGH PLYYRNIVDVLRGKAEPVVDGREGLKSLELINAAYLSAHNRQTVSLPLVLQTLRTFDHSD CPKGSPFHSQSKESS >gi|257257235|gb|ACDX02000011.1| GENE 45 53244 - 53903 871 219 aa, chain + ## HITS:1 COG:HI1278 KEGG:ns NR:ns ## COG: HI1278 COG0778 # Protein_GI_number: 16273193 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Haemophilus influenzae # 3 217 4 218 220 276 59.0 3e-74 MILTRKQALEIFKRRVSVRYYDPARKISAEDFAAILDFGRLSPSSVGCEPWQFVVVQNAA LREKIKPFAWGMQASISDASHVVFLLARKHARYDSPAFEELMDRRGLTAEERAGALERYR RFQTHDMPIADDERALFDWASKQTYIALGNMLTGAAMLGIDSCAIEGMEYAEVENILAEA GLLDPKNYGLSVAATFGYRVRDINPKPRRDASETVIWAE >gi|257257235|gb|ACDX02000011.1| GENE 46 54069 - 55151 1498 360 aa, chain - ## HITS:1 COG:NMB0418 KEGG:ns NR:ns ## COG: NMB0418 COG0472 # Protein_GI_number: 15676330 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase # Organism: Neisseria meningitidis MC58 # 1 360 1 360 360 612 95.0 1e-175 MFLWLAHFSNWLSGLNVFQYTTFRAVMAALTALAFSLLLGPWTIRKLTQLKVGQAVRTDG PQTHLIKNGTPTMGGSLILTAITVSTILWGNWANPYIWILLGVLLATGALGFYDDWRKVV YKDPNGVSAKFKMVWQSSVAIIAALALFYLASNSSNNILIVPFFKQVALPLGVVGFVVLT YLTIVGTSNAVNLTDGLDGLAAFPVVLVAAGLAIFAYASGHSQFAQYLQLPYVAGANEVV IFCTAMCGACLGFLWFNAYPAQVFMGDVGALALGAALGTVAVIVRQEFVLVIMGGLFVVE AVSVMLQVGWYKKTKKRIFLMAPIHHHYEQKGWKETQVVVRFWIITIVLVLIGLSTLKIR >gi|257257235|gb|ACDX02000011.1| GENE 47 55347 - 55520 143 57 aa, chain - ## HITS:1 COG:no KEGG:NMB0417 NR:ns ## KEGG: NMB0417 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis # Pathway: not_defined # 3 49 8 54 58 74 70.0 1e-12 MKKIFLLAGLLIATFYAGMKVQAFIYEDTCLDLGGGKNPGNYPICVIEKDANAAATQ >gi|257257235|gb|ACDX02000011.1| GENE 48 55537 - 55761 70 74 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|284799411|ref|ZP_06390128.1| ## NR: gi|284799411|ref|ZP_06390128.1| hypothetical protein NEISUBOT_03126 [Neisseria subflava NJ9703] hypothetical protein NEISUBOT_03126 [Neisseria subflava NJ9703] # 47 74 16 43 43 65 96.0 1e-09 MLVTAVGLWRGKDWARRLWLFSCILYIVYNTVNYLTVSWASWLSWPDVVIRAAICYSLFC LHPKDYFQTQENKT >gi|257257235|gb|ACDX02000011.1| GENE 49 55968 - 57335 1565 455 aa, chain - ## HITS:1 COG:NMB0416 KEGG:ns NR:ns ## COG: NMB0416 COG0770 # Protein_GI_number: 15676328 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide synthase # Organism: Neisseria meningitidis MC58 # 1 452 1 455 455 767 91.0 0 MKPLDLNFICQALNLPTPSENKPVSRVVTDSRDIRAGDVFFALAGERFDAHDFVEDVLAA GAAAVVVSREDCAAMDGALKVDDTLAALQTLAKAWRDNVNPFVFGITGSGGKTTVKEMLA AVLRRRFGDDAVLATAGNFNNHIGLPLTLLKLNEKHRYAVIEMGMNHFGELAVLTQIAKP DAALVNNALRAHVGCGFDGTNDIAKAKSEIYQGLGEDGLALIPCEDEHAVVFQTTSQDHQ QRTFGIDSGDVHAENIVLKPLSCEFDLVCGNERAAVVLPVPGRHNVHNAAAAAALSLAAG LSLDDVAEGLQGFSNIKGRLNVKAGIKGATLIDDTYNANPDSMKAAIDVLARMSAPRIFV MGDMGELGEDEAAAMHAEVGAYARDQGIEAAYFVGDNSVEAAETFGADGLWFAAKDPLIQ VLSHDLPERATVLVKGSRFMKMEEVVEALTNKEAV >gi|257257235|gb|ACDX02000011.1| GENE 50 57367 - 58380 801 337 aa, chain - ## HITS:1 COG:no KEGG:NLA_4650 NR:ns ## KEGG: NLA_4650 # Name: not_defined # Def: hypothetical protein # Organism: N.lactamica # Pathway: not_defined # 1 337 1 337 337 641 92.0 0 MGIFRCNKCGYMNEHDYESGMSEIACPKCTASVKVYDTLFFVSKLLERYFSVNRELQALK QQEEGREENAQQDTGSENQNYNPLAGVNLSETDILATEKQHEPIRQWFARANIVPMFNLQ AVNMSGFFDEAAAKLGSNYQITKNMLGQISWAYSHNHTSISLDVGKMSQKDGQTMNNLCR QFYSHTLFSKYFYQKQEKIVRLNLQRATAIKHFFCGGWLEWFALCKMLEEAKQKGKDYAF SCARNIKIEFDNEDKHELDVVFLPMGKEPIVVECKSGEFRRDIEKYVRLKKRLNLPDDRF VILAADLEESQAVALGSMYGLTFVTPKSMMKHLRMVM >gi|257257235|gb|ACDX02000011.1| GENE 51 58434 - 58955 617 173 aa, chain - ## HITS:1 COG:DR0598 KEGG:ns NR:ns ## COG: DR0598 COG0739 # Protein_GI_number: 15805625 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Deinococcus radiodurans # 8 173 28 196 197 155 50.0 3e-38 MLKMPTKTLLISAAMILFAGCTTKQLPRPNAEIAELRAKEPPTAQSLPNPVKGKRFDDTW GAARSQGRRHEGVDIFAKKNTPIRSTTPGIVTKIGRNRLGGKVIGIQGPGAWHYYAHLNK FASVRLYERVKEGQVIGYVGKTGNAKTTPAHLHYGVYLPNGAINPYPLINQER >gi|257257235|gb|ACDX02000011.1| GENE 52 59142 - 60620 1683 492 aa, chain - ## HITS:1 COG:NMB0414 KEGG:ns NR:ns ## COG: NMB0414 COG0769 # Protein_GI_number: 15676327 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl tripeptide synthase # Organism: Neisseria meningitidis MC58 # 1 491 1 491 492 959 92.0 0 MFSKLTPLAETNIPPLLCANAAGRLLHSDSRQIKQGDIFVACQGEYTDGRSYIPAAIANG AAFVFWDDDGKFAWNPEWKVPNQGIKDLKHRAGMLAAQVYGNVSDGLKVWGVTGTNGKTS ITQWLAQAADLLGEKTTIIGTVGNGFWGALEETTHTTPAPVDVQTLLYRFRQQGATAAAM EVSSHGLDQSRVNGVPFRSAIFTNLTRDHLDYHGTMEAYGTIKSRLFYWHGLKHAIINVD DEYGAELIGRLKKDCPDLAVYGYGFSEHADIRIVHFTASSDGMEAVFQTPWGEGRCRTRL LGRFNAQNLAACIALLCANGYPLDKVLDVLAKIRPASGRMDCIMNSGKPLVVVDYAHTPD ALEKALSTLQEIKPQGAALWCVFGCGGNRDRGKRPLMGATAVQGADKVVVTSDNPRLENP QDIINDILPAVPAPECVEADRAAAIRYSVERAAANDIILIAGKGHENYQDMQGVKHHFSD FEVAEKALAERI >gi|257257235|gb|ACDX02000011.1| GENE 53 60645 - 62393 1771 582 aa, chain - ## HITS:1 COG:NMA2072 KEGG:ns NR:ns ## COG: NMA2072 COG0768 # Protein_GI_number: 15794948 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Neisseria meningitidis Z2491 # 1 582 1 581 581 931 79.0 0 MLIKNEYKPRMLPKVEKIKKPVTSDGRIRIVLGCMALAFTALLGRGIYLQTTQHEFLKNQ GDQRFVRTLTLPASRGMITDRNGATLALSAPTESLYAMPSGMEEMPTAEQLTKLAAIVDL PVETLQDKLAKKDKDFIYLKRQLSQEKAEEIKALGIKGLAFQKELKRHYPMGNLFAHVIG FTNIDGKGQEGLELSREDSLHGADGAKVVLRDNKGNIVDSLDSPRNSDPKNGQDMVLSLD QRIQTLAYDELNKAVAYHKAKAGTVVVLDAQTGEILALVNSPAYDPNQPGSADSEQRRNR AVTDMIEPGSAMKPFTIAKALDSGKVGVADRFNTMPYKIGPATVRDTHVYPTLDVRGIMQ KSSNVGTSKLSAKFTPKEMYDFYHDLGVGVRMHSGFPGETAGLLRSWRRWQPIEQATMSF GYGLQLSLLQLARAYTMLTHDGELLPVSFEKQAVAPKGKRVIKASTAREVRDLMVSVTEP GGTGTAGAVDGFDVGAKTGTARKLVNGRYVDNKHVATFIGFAPAKNPRVIVAVTIDEPTA NGYYGGVVAGPVFKQVMGGSLNILGVSPTKPLTNVAAVKTPS >gi|257257235|gb|ACDX02000011.1| GENE 54 62484 - 62747 304 87 aa, chain - ## HITS:1 COG:NMA2073 KEGG:ns NR:ns ## COG: NMA2073 COG3117 # Protein_GI_number: 15794949 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 87 3 89 89 97 65.0 6e-21 MNKLNILLLVLVSVSAFAVVTVQDQSRLHFIALDKAQKQEIKLDQDYARLKLDQARLANH KLIKVAAEKQRLKPPSAGNTVMVERKK >gi|257257235|gb|ACDX02000011.1| GENE 55 62803 - 63756 351 317 aa, chain - ## HITS:1 COG:NMA2074 KEGG:ns NR:ns ## COG: NMA2074 COG0275 # Protein_GI_number: 15794950 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis # Organism: Neisseria meningitidis Z2491 # 1 317 1 318 328 513 86.0 1e-145 MSNAEYQHITVLLNEAVDALAVREDGIYVDGTFGRGGHSRLILSRLGSQGRLIVFDKDPQ AIEAAQKLAEQDGRVTVVHDGFSSFQTTLDKLGIEEIDGALFDLGISSPQIDDGARGFSF RFDAPLDMRMDPTRGMSAADWIATASEQDLHEVIKNYGEERFSRQIARAIVAQRAENPID TTRKLAQLVAQNVRTRERGQDPATRTFQAVRIFINRELEEVEAVLPQVMGRLKEGGRLAV IAFHSLEDRIVKQFVKKYSQHPPLPRWAAVKEADLPLPPLKAVGKAIKPGVEETASNPRA RSAVLRVAERTGGEITE >gi|257257235|gb|ACDX02000011.1| GENE 56 63753 - 64208 495 151 aa, chain - ## HITS:1 COG:NMA2075 KEGG:ns NR:ns ## COG: NMA2075 COG2001 # Protein_GI_number: 15794951 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 151 1 151 151 234 78.0 4e-62 MFGGAHELSIDSKGRLAIPAKFRDILLRHYTPSIVVTLDSREKLLMYPEAEWAKVVEQLL RLKTAGNQMLQRYQNLLLHNADTLEWDSAGRILIPANLRKRVDFEKDVTLVGRANRLELW GRDQWEAEMTQALDDDPEELAFQLSQTDLQL >gi|257257235|gb|ACDX02000011.1| GENE 57 64560 - 65717 1517 385 aa, chain + ## HITS:1 COG:NMA2076 KEGG:ns NR:ns ## COG: NMA2076 COG1565 # Protein_GI_number: 15794952 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 5 385 26 405 405 538 70.0 1e-153 MKAHLPLPSPAAQASSSKLFELITQEIKAQNNWIPFSRFMELALYAPEYGYYTGGSHKIG TDGDFITAPTLTPLFGQTLARQLAELLPQTAGNLYEFGAGTGHLAATLLKSLSDDLKHYY IIELSPELAERQRQFIAEHTTPQLAQKVIHLTELPKSFDGIIIGNEVLDAMPVEIIRRTQ NTFQHIGISITPDGQFEQSPQPLKQPDLLRLAATYFPETEHPYTSELHPAQYAFILTLAQ KITRGGMIFIDYGFDATQYYHPQRDEGTLIAHYRHHTVHDPFFHIGLTDLTAHVNFTDIA QAGTDGGLDLIGYLPQSHFLFNLGITDLLAQTAPPGTADYLRVSTAVQKLTDQHEMGELF KVIAFGKNIDIDWTGFLFGDICHKL >gi|257257235|gb|ACDX02000011.1| GENE 58 66287 - 67291 1510 334 aa, chain - ## HITS:1 COG:NMA0042 KEGG:ns NR:ns ## COG: NMA0042 COG0167 # Protein_GI_number: 15793074 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotate dehydrogenase # Organism: Neisseria meningitidis Z2491 # 1 333 1 333 335 593 90.0 1e-169 MYSLARSLLFKIDAEKAHHFTLDALNKVYKLGLLPIFDNRTKPVKLMGITLPNPVGLAAG LDKNGEYIDALGALGFGFLEIGTVTPKPQPGNPQPRLFRVPEHQGIINRMGFNNHGIDAM IQNIEKSRYQGVLGINIGKNAVTPIENAADDYLICLEKAYAHASYITVNISSPNTKNLRA LQGGDELSALLEALKNKQAQLAAEHGKYVPLAVKIAPDLDEAQIEDIAHVVKAVEMDGII ATNTTIDKSSLGSHPLAGEQGGLSGLPVREKSNQVLKMLAEHIDGKLPIIGVGGIMNGKD AAEKIRLGATAVQVYSGMIYKGPALVKECLVALK >gi|257257235|gb|ACDX02000011.1| GENE 59 67447 - 68097 703 216 aa, chain + ## HITS:1 COG:NMB1830 KEGG:ns NR:ns ## COG: NMB1830 COG0546 # Protein_GI_number: 15677666 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Neisseria meningitidis MC58 # 3 215 4 216 219 264 64.0 9e-71 MKPELIIFDWDGTLADTTRPIIRTFQQSFADCGLKAPDADAIRALIGYSLPEIIFRLAPD AGEHLREELAETYAAHYLNPNNHNMTLFPEAIPCLNTLKQQGFWLAVATGKGRTGLDRSI MQTGTADFWMATACASEYASKPSPDMVFALCSELGLEPSQTLIVGDTTHDLDMAANAKAP AVAVPTGAHTAAQLATRPHLAILNDLSELPGFIARL >gi|257257235|gb|ACDX02000011.1| GENE 60 68197 - 69027 745 276 aa, chain - ## HITS:1 COG:no KEGG:Asuc_0907 NR:ns ## KEGG: Asuc_0907 # Name: not_defined # Def: hypothetical protein # Organism: A.succinogenes # Pathway: not_defined # 2 274 4 275 275 295 51.0 2e-78 MLTITTCLAYPEPPSNLLPLADALTRDGIPTTFAPWQNRPKSAFILPLCAWDYAAEPEAF GQWLTEAEACGQRFINPVGLMRWNMDKRYLCDLAEWGADVIPSVQTSSEKEKLEEILENR GWREVVVKPVIGQSGRGVAKIRAGEVSLKVEDYPQGVIVQPYIREIETAGETSLVFFDGH FSHAVLRMPPQGEWRANSAYGVAVSPAAPPEKAVETARQILAMLPQIPAYARIDGTLIGE RLLLNELELIEPALYLHTAENAVAHMAQAVKRVIAG >gi|257257235|gb|ACDX02000011.1| GENE 61 69355 - 70470 1587 371 aa, chain + ## HITS:1 COG:YPO1343 KEGG:ns NR:ns ## COG: YPO1343 COG0614 # Protein_GI_number: 16121623 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Yersinia pestis # 15 371 26 378 378 263 39.0 4e-70 MKLLRFSSLALAAALAFGTAAAHAKPVQLTDVNGRKVTVDLPAKRVVLGFYYQDYMAIGG KDALNNVVGFSKAVWSDWAPPSWAAFSKAVPKLNQLADVGEVEVGTFSVEKVLALKPDLL ILADWQYKALGSDLARINKAGIPIVVLDYNAQTVAKHVQSTKLIGTLTGQQQKADKLAAD YKRIADTIQARVQKANLPKPKVYVEFGNKGPAEHSVTFGKSMWGSMATLVGGNNISASSV EFYGPINPEKVLAAKPDVIVITGRETELKKSPTAMVMGWGIPKAEAEKRLAGFAKRAGWA NLPAIKNNRLYAAYHANSRTLSDGASIQFMAKAIYPQLFKDFNPEKTYTDFYRQNLPVVP NGTFYLYPKGQ >gi|257257235|gb|ACDX02000011.1| GENE 62 71036 - 72082 1185 348 aa, chain + ## HITS:1 COG:MA2149 KEGG:ns NR:ns ## COG: MA2149 COG0609 # Protein_GI_number: 20090992 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Methanosarcina acetivorans str.C2A # 14 348 18 351 355 273 48.0 3e-73 MNDSVVADIVRNQRRLEGKRWLIVLMFLIIAAVSFLFDIATGPAMTDTLPVGEVVNVLLG KPETDEMNRLIVMDLRLPIAVMALVVGAALGVGGAEIQTLLNNPMASPYTLGLAAAAGLG ASVVIAFGGFGLPETVAVPIGAFVMTMLASGILFLFASARRFNSAMLVLVGIALLFLFQS ILSLIQFIAAPEISQQILFWLFGSLTKATWETVIVTAAVTAVCVLLLSRDVWKLTALRLG EERAVGLGINLQLLRLKTLVLVAVMTATAISFVGVIGFIGLVAPHVARILLGEDQRFFLP GAMLAGAAFLSVASVLSKVIIPGALFPVGIVTSFVGVPFFFWIVLSKR >gi|257257235|gb|ACDX02000011.1| GENE 63 72153 - 73376 1419 407 aa, chain + ## HITS:1 COG:YPO1343 KEGG:ns NR:ns ## COG: YPO1343 COG0614 # Protein_GI_number: 16121623 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Yersinia pestis # 27 361 40 371 378 261 38.0 2e-69 MKPVCRILTAALFSLAVQGVCAEVKTLTDVRGREVRVDVPAKRVVLGFYYPDYIAVSGVD KFDNVVGISREFWEKFNSGSWSLYRAKIPSLQNIGDIGNVNAGTFSFEKTLAMKPDVVVL ADWQYDALKEEMPRFEKAGIPVVVVDFNAQTVERHTASAKLFGEIAGTPERAGQIAGEYA QGMADIQKRVAEAGKPKPKIYIEFGDKGPAEHSFTFGKNMWGAIADTVGGDNIAAAFIKD WGAINPEQFLAAKPDVVIISGTESGLKQPAAMAMGIGIEAAEAQKRLQGFIRRAGWAEIP AVRNGRVFGIYHTASRSLSDLASAQFIAKALYPEAFADVNPEETYREFHRKYLPVEPQGT FFIRLGCDGLEDCNKQAAADTVAASAETVAGPSLWQRIKNWFAALFA >gi|257257235|gb|ACDX02000011.1| GENE 64 73389 - 74156 303 255 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 233 1 237 245 121 33 1e-26 MLKLENVHIRRGDYVVADSIDLTLEQGKVYSVLGPNGTGKSSLMKTIFGEVAHKGTIHYG DEALSKIHLQSWRKRIGYMPQDTAAEASLTALEVVLLGRMDALHMHVGDELLHEAASIMA ELGIGHLAHRDVMRLSGGQRQLVMFAQVMLRRPEILMLDEPVSALDMHHQLNLLERVVQY THEHNLVTLMVLHDLSLAAQFSDGVILLGEGKVQAQGAPQDVLQADMIGRLYKVDIELLY DSKGLPVIRPMRQSA >gi|257257235|gb|ACDX02000011.1| GENE 65 74386 - 74817 885 143 aa, chain + ## HITS:1 COG:BMEII0965 KEGG:ns NR:ns ## COG: BMEII0965 COG3794 # Protein_GI_number: 17989310 # Func_class: C Energy production and conversion # Function: Plastocyanin # Organism: Brucella melitensis # 20 143 25 146 146 83 39.0 1e-16 MKKSLFLLMLTASLGAYAANHEVKMLDNGKDGSMVFEPGYVNAKVGDTVTFKAANKGHWV QSKALPDGVADFLSEDGKDFTLKLDKEGVYVYTCPPHRMMNMSGVIQVGKPVNKAKAQAV VDELENRAMQSKGRLKKYMQQVK >gi|257257235|gb|ACDX02000011.1| GENE 66 74897 - 75793 1141 298 aa, chain - ## HITS:1 COG:NMA2197 KEGG:ns NR:ns ## COG: NMA2197 COG0583 # Protein_GI_number: 15795066 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Neisseria meningitidis Z2491 # 1 295 1 295 303 447 74.0 1e-125 MDTLFSLKVFRQVVQSGSFTRAAEQLDISTAMASKHVSHLENSIKAKLLHRNSRNLHLTE AGEEYYRQCSYALDTLDTAAQKAAGGADTPQGMLRVTMPLWFAGNLIGTWLAEYRERYPE VTLDLVLDNRHVDLIAEGFDLALRVAKTLSPSLIVKPLAQIQFVLLASPEYLAKHGKPQT PEEVMRHPAILPTYTDQRNLEITHRETGEKSILTLNPVIQSDNTLMIRELVRAGAGIAYQ PLWSARQDLKEGRLVSLLPEYRVRTEQLNAVYVDRAFLSAKVRSFIDFLNEKISAEGE >gi|257257235|gb|ACDX02000011.1| GENE 67 75917 - 76318 708 133 aa, chain + ## HITS:1 COG:NMA2196 KEGG:ns NR:ns ## COG: NMA2196 COG2259 # Protein_GI_number: 15795065 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis Z2491 # 1 133 1 132 132 154 79.0 6e-38 MSATCARIQPILLSVLRIVTAYLFLLHGTSKFFGFPTAMGSGSPEGLMLVAGILEIVGGI MLILGMFTRPTAFVLSGQMAAAYFMAHASQGSALFPLANGGESAVLFCFVFLYLAAAGGG SLALDNLFGKDKA >gi|257257235|gb|ACDX02000011.1| GENE 68 76415 - 77020 879 201 aa, chain + ## HITS:1 COG:NMA2195 KEGG:ns NR:ns ## COG: NMA2195 COG3560 # Protein_GI_number: 15795064 # Func_class: R General function prediction only # Function: Predicted oxidoreductase related to nitroreductase # Organism: Neisseria meningitidis Z2491 # 1 201 1 201 201 335 85.0 2e-92 MTHQTLQQAAETRRSIYALNKNLPISNEEISEIVKHAVLHTPSSFNSQSTRVIVLFGEEH GKVWQFVEDALRAIVPAEQFEPTAQKLNLFKAGAATILFFEDQNVVKGLQEQFPSYAANF PVWADHANAMTQYAVWTTLAAAGVGANLQHYNPLPDAAIAKEWNLPESWLLRAQMVIGGI EAPAGEKAFEPVENRLKVFGA >gi|257257235|gb|ACDX02000011.1| GENE 69 77102 - 77374 395 90 aa, chain - ## HITS:1 COG:NMA0419 KEGG:ns NR:ns ## COG: NMA0419 COG2924 # Protein_GI_number: 15793424 # Func_class: C Energy production and conversion; O Posttranslational modification, protein turnover, chaperones # Function: Fe-S cluster protector protein # Organism: Neisseria meningitidis Z2491 # 1 87 1 87 88 164 95.0 3e-41 MTRMVHCVKLGKEAEGMKFPPLPNELGKRIFENVSQEAWNAWTRHQTMLINENRLSLADP RAREYLAQQMEQYFFGDGADAVQGYVPPQE >gi|257257235|gb|ACDX02000011.1| GENE 70 77240 - 77485 56 81 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MARPRIPSLLGHIFKNTLAQLVGQWREFHTFGLFAEFDAVNHTGHGGFLHDGVSDSAYFI VLPIYRKGCEKRAKSAKYAAF >gi|257257235|gb|ACDX02000011.1| GENE 71 78099 - 78839 1003 246 aa, chain + ## HITS:1 COG:no KEGG:PAU_01244 NR:ns ## KEGG: PAU_01244 # Name: not_defined # Def: hypothetical protein # Organism: P.asymbiotica # Pathway: not_defined # 79 245 83 246 248 125 41.0 2e-27 MKLNLQKTTAAVLAVLFSAGVFAANDYYNPFDYGYKNHKYGKKWGKPASEAEGEKVMKHA AYRSGVYYTNVNRMPGNVDRNGVKTVQVNDAYTRQNLGRYAFNTIKSGGSEVYYGEWVGK EYAKGTNRGVFYSGDKRATSMPVSGVANYAVKGINNYTGNNPMAGTLRADFGQRVLAGSM RNNAVNMDVHARIKPSSASFEGYARANGHFGKTEGHFFGHNASALAGVAKFKTDRNLDTA YGGVKR >gi|257257235|gb|ACDX02000011.1| GENE 72 78947 - 80386 2319 479 aa, chain + ## HITS:1 COG:no KEGG:plu3514 NR:ns ## KEGG: plu3514 # Name: not_defined # Def: hypothetical protein # Organism: P.luminescens # Pathway: not_defined # 1 479 5 499 499 278 33.0 5e-73 MYKPSACLILFLAAPVLAAPRSDFSDDRTAQRLWQDTRQTMQEQEQKVREYRLDIPSENI GQTAETDPEADQGEALFNAVNHSDWQTVRPLLERYTQQTEYDPDIALFARASLARGEGRW KAAKQDYETLLQRHPDFTRGRLDYTRLLFEGRLNREATSEFMRLQNEDLPEAVKENIGHF RDSLNQRQSWQGSLSVGAVHNSNINEASGKTWCKTEIDGECWEEFSGDKPISANGIKYEA AAVRRWQIKGHHGIAARALGYGRFYRDHKDFNEHTLNLSAGYQFENHRHTFALAPLVEWN GSGGKTLNRAYGVRSEWNLDKGSWTWNTEAEWKHLSYSDKTRLLDGNLISVYNTLSYFPR NDLMLYGGIDWQQRKAKEPVDSYRLISARLGAAKMFEAGFDASASATFGIRSHREENAVL EQRRRDKEQTYRLSIGADRWKFAGLKPVLSYKHRRVHGNTDWLYSYKQNEVGLSLVKSF >gi|257257235|gb|ACDX02000011.1| GENE 73 80476 - 80691 179 71 aa, chain - ## HITS:1 COG:no KEGG:NMCC_2088 NR:ns ## KEGG: NMCC_2088 # Name: not_defined # Def: integral membrane protein # Organism: N.meningitidis_053442 # Pathway: not_defined # 1 71 1 71 71 93 92.0 2e-18 MFKLGVYACLGLFVGWVLLLILQLWFSFIEAELFIKITLTMAGLFVIILAALLVFSQYFS EKKMKDDGFIN >gi|257257235|gb|ACDX02000011.1| GENE 74 80684 - 80899 396 71 aa, chain - ## HITS:1 COG:no KEGG:NGK_2285 NR:ns ## KEGG: NGK_2285 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 1 71 1 71 71 112 88.0 7e-24 MKEYKVVIYQENLLSSLIFGAAKVNPVKFSAFLNSQTPEGWRVVTMEKDRRRMLLFFVRE AYLVILERERV >gi|257257235|gb|ACDX02000011.1| GENE 75 80970 - 82313 2519 447 aa, chain - ## HITS:1 COG:NMA0303 KEGG:ns NR:ns ## COG: NMA0303 COG0137 # Protein_GI_number: 15793316 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate synthase # Organism: Neisseria meningitidis Z2491 # 1 447 1 447 447 904 98.0 0 MSQSHTILQHLPIGQKVGIAFSGGLDTSAALLWMKLKGALPYAYTANLGQPDEDDYNAIP KKAMEYGAENARLIDCRAQLAHEGIAAIQCGAFHVSTGGIAYFNTTPLGRAVTGTMLVSA MKEDDVNIWGDGSTYKGNDIERFYRYGLLTNPALKIYKPWLDQQFIDELGGRHEMSEFLI ANGFNYKMSVEKAYSTDSNMLGATHEAKDLEFLNSGIKIVKPIMGVAFWDENVEVKPEEV SVRFEEGVPVALNGKEYADPVELFLEANRIGGRHGLGMSDQIENRIIEAKSRGIYEAPGM ALFHIAYERLVTGIHNEDTIEQYRINGLRLGRLLYQGRWFDSQALMLRETAQRWVAKAIT GEVTLELRRGNDYSILNTESPNLTYQPERLSMEKVEDAAFTPLDRIGQLTMRNLDITDTR AKLGIYSQSGLLSLGEGSVLPQLGNKK >gi|257257235|gb|ACDX02000011.1| GENE 76 82462 - 82980 317 172 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261365140|ref|ZP_05978023.1| ## NR: gi|261365140|ref|ZP_05978023.1| putative membrane protein [Neisseria mucosa ATCC 25996] putative membrane protein [Neisseria mucosa ATCC 25996] # 1 172 1 172 172 359 100.0 5e-98 MHEYRLKQPKNRLDRLESVFFAVFGLGLILMERRIALGLTLFAFAAWSLWRDFYKRSREI VFSEEGICKISREGTQTLPLEDFCGVAVFTDTKRSRIINIYRIALVPKQPYDTPLTVYTA VQSFTRLPALPPESVNYIHHRIVECTGLQDFGDIGSATLSELYAKCCFLNQD >gi|257257235|gb|ACDX02000011.1| GENE 77 83049 - 83861 1063 270 aa, chain + ## HITS:1 COG:NMB2128 KEGG:ns NR:ns ## COG: NMB2128 COG1058 # Protein_GI_number: 15677941 # Func_class: R General function prediction only # Function: Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA # Organism: Neisseria meningitidis MC58 # 8 267 4 263 266 465 86.0 1e-131 MKDRQHLFNLIIIGDEILHGSRQDKHFAFFKSLLESRGLKLNQVQYLPDEPDLLVRQLRR SFSDDLPTFVTGGIGSTPDDHTRQAAAAALDLPVVRHPEAAKFIEAVTLKRGEPLDAPEH AQRLKMADFPAGAELVPNPFNNIAGFSIREHYFFPGFPVMAHPMAEWVLDTYYADRFNQT EHGSRSVYVFGQPESRVAPIMEYVERTYPGVRSYSLPSVGWQNADGTAVKPHIEFGIKAE GEACRDLDKAWDEVLQRLKDLGAELKDTPA >gi|257257235|gb|ACDX02000011.1| GENE 78 84053 - 84218 94 55 aa, chain + ## HITS:1 COG:no KEGG:NLA_8450 NR:ns ## KEGG: NLA_8450 # Name: not_defined # Def: transposase # Organism: N.lactamica # Pathway: not_defined # 1 55 106 160 221 103 96.0 2e-21 MSKYTLHFKYQAVLHYLHIRSQQRTADHYGISRTHLRRWIRAYQEGGIGALEHPQ Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:04:19 2011 Seq name: gi|257257233|gb|ACDX02000012.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont11.1, whole genome shotgun sequence Length of sequence - 83020 bp Number of predicted genes - 72, with homology - 72 Number of transcription units - 42, operones - 19 average op.length - 2.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 14 - 499 354 ## Pecwa_2437 hypothetical protein 2 1 Op 2 . - CDS 582 - 1718 843 ## COG5351 Uncharacterized protein conserved in bacteria 3 1 Op 3 1/0.250 - CDS 1731 - 4004 1787 ## COG3501 Uncharacterized protein conserved in bacteria - Prom 4055 - 4114 2.8 4 2 Op 1 3/0.125 - CDS 4147 - 7704 1787 ## COG3523 Uncharacterized protein conserved in bacteria 5 2 Op 2 8/0.000 - CDS 7736 - 9001 708 ## COG3455 Uncharacterized protein conserved in bacteria 6 2 Op 3 8/0.000 - CDS 9026 - 10369 805 ## COG3522 Uncharacterized protein conserved in bacteria 7 2 Op 4 . - CDS 10395 - 10973 311 ## COG3521 Uncharacterized protein conserved in bacteria - Prom 10993 - 11052 6.1 8 3 Tu 1 3/0.125 - CDS 11165 - 13816 1258 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 - Prom 13836 - 13895 4.5 - Term 13857 - 13902 3.1 9 4 Op 1 9/0.000 - CDS 13906 - 14946 785 ## COG3520 Uncharacterized protein conserved in bacteria 10 4 Op 2 8/0.000 - CDS 14943 - 16919 1138 ## COG3519 Uncharacterized protein conserved in bacteria 11 4 Op 3 3/0.125 - CDS 16916 - 17428 371 ## COG3518 Uncharacterized protein conserved in bacteria 12 4 Op 4 1/0.250 - CDS 17462 - 18271 582 ## COG4455 Protein of avirulence locus involved in temperature-dependent protein secretion - Prom 18358 - 18417 4.4 - Term 18363 - 18405 9.2 13 5 Op 1 4/0.000 - CDS 18431 - 18913 748 ## COG3157 Hemolysin-coregulated protein (uncharacterized) - Prom 18936 - 18995 2.6 - Term 18950 - 18979 0.5 14 5 Op 2 6/0.000 - CDS 19001 - 20500 1311 ## COG3517 Uncharacterized protein conserved in bacteria 15 5 Op 3 3/0.125 - CDS 20534 - 21052 586 ## COG3516 Uncharacterized protein conserved in bacteria 16 5 Op 4 . - CDS 21120 - 22187 945 ## COG3515 Uncharacterized protein conserved in bacteria 17 5 Op 5 . - CDS 22192 - 22743 -3 ## gi|255068371|ref|ZP_05320226.1| type VI secretion-associated protein, BMA_A0400 family - Prom 22839 - 22898 8.4 18 6 Op 1 . + CDS 23122 - 27264 5449 ## COG3209 Rhs family protein 19 6 Op 2 . + CDS 27343 - 27744 411 ## gi|288576025|ref|ZP_05978043.2| conserved hypothetical protein + Term 27755 - 27806 16.1 + Prom 27778 - 27837 2.6 20 7 Op 1 . + CDS 28000 - 28842 502 ## COG3209 Rhs family protein 21 7 Op 2 . + CDS 28876 - 29376 341 ## Dda3937_04645 hypothetical protein + Term 29442 - 29491 -0.0 + Prom 29381 - 29440 4.3 22 8 Op 1 . + CDS 29679 - 31049 1351 ## COG3209 Rhs family protein 23 8 Op 2 . + CDS 31054 - 31272 263 ## gi|261365165|ref|ZP_05978048.1| conserved hypothetical protein + Term 31515 - 31551 4.1 24 9 Tu 1 . + CDS 31804 - 32247 222 ## gi|261365166|ref|ZP_05978049.1| hypothetical protein NEIMUCOT_05532 + Term 32335 - 32385 11.6 + Prom 32357 - 32416 2.7 25 10 Op 1 . + CDS 32546 - 35596 4131 ## COG3209 Rhs family protein 26 10 Op 2 . + CDS 35650 - 36102 319 ## gi|261365168|ref|ZP_05978051.1| putative membrane protein, with TPR repeat-containing domain protein + Term 36113 - 36164 16.1 - Term 36221 - 36271 3.2 27 11 Tu 1 . - CDS 36335 - 36880 276 ## gi|288576029|ref|ZP_06394125.1| conserved hypothetical protein - Prom 36921 - 36980 1.8 28 12 Op 1 . + CDS 36599 - 38803 2808 ## COG3209 Rhs family protein 29 12 Op 2 . + CDS 38832 - 39170 255 ## gi|261365171|ref|ZP_05978054.1| conserved hypothetical protein + Term 39211 - 39257 10.1 30 13 Op 1 . + CDS 39319 - 41397 1772 ## COG3209 Rhs family protein 31 13 Op 2 . + CDS 41400 - 41996 241 ## gi|261365173|ref|ZP_05978056.1| conserved hypothetical protein + Term 42045 - 42093 10.3 - Term 42099 - 42151 8.1 32 14 Tu 1 . - CDS 42261 - 43256 1080 ## COG3547 Transposase and inactivated derivatives - Term 43467 - 43503 -0.5 33 15 Tu 1 . - CDS 43714 - 44004 77 ## gi|225076968|ref|ZP_03720167.1| hypothetical protein NEIFLAOT_02020 - Prom 44161 - 44220 2.0 34 16 Op 1 . + CDS 43963 - 45654 1459 ## COG3209 Rhs family protein 35 16 Op 2 . + CDS 45673 - 45984 292 ## gi|261365178|ref|ZP_05978061.1| putative ImpA protein + Term 46153 - 46194 0.7 36 17 Op 1 . + CDS 46600 - 47841 927 ## COG3209 Rhs family protein 37 17 Op 2 . + CDS 47851 - 48174 323 ## gi|261365182|ref|ZP_05978065.1| putative DNA polymerase III protein + Term 48183 - 48236 13.9 38 18 Tu 1 . + CDS 48255 - 48908 711 ## COG3209 Rhs family protein + Prom 49360 - 49419 6.5 39 19 Tu 1 . + CDS 49447 - 49932 352 ## Psyr_4987 hypothetical protein + Term 49989 - 50025 4.1 + Prom 50046 - 50105 3.5 40 20 Tu 1 . + CDS 50141 - 51478 2078 ## COG3209 Rhs family protein + Term 51498 - 51527 0.4 41 21 Tu 1 . - CDS 51927 - 52127 257 ## NLA_13200 hypothetical protein - Prom 52241 - 52300 3.7 + Prom 52024 - 52083 2.6 42 22 Op 1 8/0.000 + CDS 52285 - 53424 1174 ## COG2021 Homoserine acetyltransferase 43 22 Op 2 2/0.125 + CDS 53421 - 54002 923 ## COG0500 SAM-dependent methyltransferases + Term 54016 - 54047 0.2 + Prom 54113 - 54172 5.1 44 23 Tu 1 . + CDS 54257 - 55294 671 ## COG2801 Transposase and inactivated derivatives - Term 55237 - 55277 7.3 45 24 Op 1 2/0.125 - CDS 55383 - 57368 3233 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit - Term 57384 - 57425 10.1 46 24 Op 2 . - CDS 57438 - 57962 626 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - Prom 57993 - 58052 6.4 + Prom 58053 - 58112 5.9 47 25 Op 1 . + CDS 58309 - 59103 848 ## COG2116 Formate/nitrite family of transporters + Term 59134 - 59191 17.3 + Prom 59140 - 59199 4.0 48 25 Op 2 . + CDS 59222 - 60721 2273 ## COG0657 Esterase/lipase + Term 60736 - 60796 19.1 - Term 60728 - 60779 17.0 49 26 Tu 1 . - CDS 60796 - 62187 1157 ## PROTEIN SUPPORTED gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 - Prom 62277 - 62336 5.0 - Term 62687 - 62729 5.0 50 27 Tu 1 . - CDS 62766 - 63134 421 ## COG2967 Uncharacterized protein affecting Mg2+/Co2+ transport - Prom 63177 - 63236 4.5 51 28 Op 1 12/0.000 - CDS 63238 - 63726 340 ## COG1267 Phosphatidylglycerophosphatase A and related proteins 52 28 Op 2 . - CDS 63719 - 64675 733 ## COG0611 Thiamine monophosphate kinase - Prom 64696 - 64755 2.7 53 29 Op 1 2/0.125 - CDS 64826 - 65617 635 ## COG0084 Mg-dependent DNase 54 29 Op 2 2/0.125 - CDS 65625 - 66626 1408 ## COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D - Prom 66647 - 66706 3.2 55 30 Tu 1 . - CDS 67063 - 67746 908 ## COG0586 Uncharacterized membrane-associated protein - Prom 67794 - 67853 5.3 - Term 67957 - 68010 4.0 56 31 Tu 1 . - CDS 68052 - 69389 1984 ## COG1109 Phosphomannomutase - Prom 69440 - 69499 2.4 - Term 69557 - 69605 7.3 57 32 Tu 1 . - CDS 69832 - 70686 1034 ## COG0294 Dihydropteroate synthase and related enzymes - Prom 70861 - 70920 3.9 + Prom 70740 - 70799 2.5 58 33 Tu 1 . + CDS 70832 - 72025 1652 ## COG1448 Aspartate/tyrosine/aromatic aminotransferase + Term 72086 - 72131 -0.2 - TRNA 72130 - 72205 77.2 # Arg CCG 0 0 + Prom 72358 - 72417 4.2 59 34 Tu 1 . + CDS 72492 - 73349 1093 ## COG3245 Cytochrome c5 + Term 73385 - 73417 2.3 - Term 73736 - 73802 17.6 60 35 Tu 1 . - CDS 73819 - 74733 1142 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen - Prom 74789 - 74848 5.7 - Term 74970 - 75021 8.2 61 36 Tu 1 . - CDS 75059 - 76072 429 ## COG0583 Transcriptional regulator - Prom 76127 - 76186 4.3 + Prom 76340 - 76399 3.7 62 37 Tu 1 . + CDS 76451 - 77212 945 ## COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins + Term 77236 - 77263 1.5 - Term 77321 - 77364 5.2 63 38 Tu 1 . - CDS 77391 - 78686 1725 ## COG0172 Seryl-tRNA synthetase - Prom 78716 - 78775 6.3 + Prom 78771 - 78830 5.4 64 39 Op 1 10/0.000 + CDS 78899 - 79270 622 ## PROTEIN SUPPORTED gi|241760375|ref|ZP_04758470.1| ribosomal protein S6 + Prom 79280 - 79339 2.9 65 39 Op 2 10/0.000 + CDS 79360 - 79569 125 ## COG2965 Primosomal replication protein N 66 39 Op 3 27/0.000 + CDS 79576 - 79806 388 ## PROTEIN SUPPORTED gi|225075138|ref|ZP_03718337.1| hypothetical protein NEIFLAOT_00138 67 39 Op 4 . + CDS 79823 - 80275 700 ## PROTEIN SUPPORTED gi|59801015|ref|YP_207727.1| 50S ribosomal protein L9 + Term 80292 - 80352 0.5 + Prom 80301 - 80360 2.0 68 40 Tu 1 . + CDS 80388 - 81470 1195 ## COG2951 Membrane-bound lytic murein transglycosylase B + Term 81481 - 81510 1.4 - Term 81469 - 81498 1.4 69 41 Op 1 . - CDS 81593 - 82111 450 ## Apre_1390 aldose 1-epimerase 70 41 Op 2 . - CDS 82125 - 82586 274 ## COG3335 Transposase and inactivated derivatives 71 41 Op 3 . - CDS 82622 - 82954 264 ## PROTEIN SUPPORTED gi|148984739|ref|ZP_01818007.1| IS630-Spn1, transposase Orf1 72 42 Tu 1 . + CDS 82757 - 82939 84 ## gi|288576051|ref|ZP_05978102.2| hypothetical protein NEIMUCOT_05594 Predicted protein(s) >gi|257257233|gb|ACDX02000012.1| GENE 1 14 - 499 354 161 aa, chain - ## HITS:1 COG:no KEGG:Pecwa_2437 NR:ns ## KEGG: Pecwa_2437 # Name: not_defined # Def: hypothetical protein # Organism: P.wasabiae # Pathway: not_defined # 1 124 1 118 430 80 38.0 2e-14 MAFNKIARKSSDFRVVFTVPDFCWPPPPAPPVAPPIPFPLFADLGGAQTVATDVRLNRKP AFVFNASKTNRTTGDEPAVPGRKGVLSRTATKPAWPMMHSSSVKIRKRYIIRAGDMFHMN NKFKKKLPPKPCISCKAAAAAGRPVNPIHGLKFWRVKPTLL >gi|257257233|gb|ACDX02000012.1| GENE 2 582 - 1718 843 378 aa, chain - ## HITS:1 COG:mlr2351 KEGG:ns NR:ns ## COG: mlr2351 COG5351 # Protein_GI_number: 13472150 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mesorhizobium loti # 18 328 17 318 367 126 27.0 9e-29 MFELQNFTCFHTQQFKNIDQTDRAYDVVVAKISYEFEIDPETGKTELAFARKQTPLTFAD TYYGDPSQTSTQFESDFSLYKPKTDLVVNATAYAPDDVPSRQFTVSVSIGDYQKSLALTG ERYWVREVAGWSLSEPNPILSLPIRYEFAFGGSAVEDDHTGYQQNAIGIGYYPKAELKKN GFKRTLKAHQIYDPAHPVRDPSDKAAPEGFGFMPRYFALRAQHTGTADAQWIANRAPLLP EDFSMAYWNGAHPSLQLPHLKPNHIYELTFTGMVHSFQAPNQRFTVDLPVETVFVHAHTA TNSSLCKDMILDTILVDVEQRRIDCSYRTSFPEELEIAACQLRFIARHERADQIAAAQAC RDSQDEFIPIPPSLAAHA >gi|257257233|gb|ACDX02000012.1| GENE 3 1731 - 4004 1787 757 aa, chain - ## HITS:1 COG:mll2357 KEGG:ns NR:ns ## COG: mll2357 COG3501 # Protein_GI_number: 13472156 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mesorhizobium loti # 3 751 5 761 775 442 34.0 1e-123 MNRTVVAHTPLGSQLLFKKMLGTEFVSNLFEFNITLVSKDSNLQGKDIIGQPITLEIDTE VGSPRYLNGLVTDFGYIGEDEDEEDYHAYTCTARPFMWYLTQNTDSRVFVDKSVLDITNE VLSPFGFPFQVKCQKSYRTRGFCVQYQENSFDFLSRLFEQEGIYYYFTHSNGSHELVIAD DVGILEAIPSPNIPYHSKNTAPGAPNIAYIDVWEERDALKSSQFVTQEYNYKNAKVPMKS SDSVHDFSSVPMEHYDFYTGFSDVSEAQNYSQVRSEDLKSQTKIITGSGTALTVAPGYTF TLSKHPHSSSNTEYTILKADYDFEEAGYTTGDRIGKFRISFRVLPKSYPYRPPLKTPKPK VLGTQAATVTGPAGEEVYTNEYGDIKVQFHWDRYGKMDENSSNWVRVTQGSAGAGYGSIN TPRIGEEVLVDFINGDADRPIVLGRLYNSAMSPPWGFPAAAKQSGIKSKSFNSPLANFNE LMFNDTAGSEMVNFQAQKDLTSLVKNNETRNVNNDRTTTIGNNETVTVVGDRAKTVQKNE TASITQNRTKSVGQNETSSITQNQSISVGDNQSTSVGKDQSVNVGQNRSRSVRLNEKVGI GLSQALTVGQDQNVAVGKNQALTVGANRNKTVVANEVSSIGGNRQETVSLNGMNNVGIGQ MTNIGAGYMLNVGAGWMTNVVGAEMHSVGLVMGLNAGMNIGLNAGRNITLSAGKKITIQV GNSMILIDKNKISIVSKSIKIVGTKEVDIDGKKVDIN >gi|257257233|gb|ACDX02000012.1| GENE 4 4147 - 7704 1787 1185 aa, chain - ## HITS:1 COG:PA0077 KEGG:ns NR:ns ## COG: PA0077 COG3523 # Protein_GI_number: 15595275 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 77 1182 4 1095 1101 457 27.0 1e-128 MKKILYFLGSRSLWVMLGIAGLIILVWFIGPLISIGEIRPLASKVIRLAVCAAIVGIWLA KAIFRQYRESRRNAALLKEIRAAQEPILKNASDVSSMSRQFAEMDKVLKNAKFSKSKNSL LARLEEGQYLYQMPWYVVLGAAGSGKTTALKRSGLNFPLESTLGTSVSGLAGTRDCDWFL SDEIVLLDTAGRLSLHDNHSNKDSNDWEEFVSLLKRYRPKQPINGVLVTVGVDDLLGGKT NIPEISAELRKRIHEMHTKLGIHFPVYLMITKLDLLHGFDKFFDHLTEEQRNQYLGISLS DTEGMETPIATASNALSEVVDKLRSSMLGTIHQLESSEDKAAAFAFPEEFERLNQAVLSL FKELSKSSKFEQPISWRGVYFSSGTQTGQHFNPILDGLQNDFQLSKKYLDSDRTKTQNNE RSFFLNRLFSDVILSEANLAGENKSWFVKKQMLYWLGIGAIVTIIAACLAMMLNSYSNNR SYLEQVGDKATKLSQEAKKYTEAPNLLETVTFAEHVKDTTGSKEIPDLSSPPLSYRMGLY QGGQMEDVGESAYRRILQDNVMPLISFKLDELLRTTSGSDGINGYNALKAYLMMYDKEHF DAAFMQNWLMTNLSKAESSGMSDQQKKSVEKALNQILSKQSITPSVPYDETLVERRRQEI AQRDIATMVLEDTINTVTLSGKEVITSVSFSSMGGVQSHLLFRRKTGRALKEPINFIYTK EAYITKVLPAMVKSAEQFFNEDNWVLGSYASQSQSKATVLSDAQKLYFSNYIKAWNNYLS DLSLVVPKSSRESIQIAKLLSEKNSPLVNIIKGISDNTTLTIDKRITDKADSKIADWLNR AGLSKLLDAEGEANVKNELAALKLATPVDDAFADFHTLTETTNDQPPAINSVTEAINDLY VYLVAVNVAVEKGVDLPPDDPFVKYKAEVNRLPLPFRPMLDSFSEIILKNTDKIVDEKLM STLEKQLATVTNSCQEIHQQGYPFDRGSETNVALESFSNIFGPNGMYSKFTNLSGEAAVL ARSEKLETLTAKNSAFKDRFAKLNDIATIRQGYFDKGSETPTFDFTIKVLLLDSSLESVN VSYAGKSYVYSHGPVNPATFTWPSKEENALAKIDVSSPQINSAGISSTGPWSIFRLIEKG KIIRQTGNTTVVEYNIQGKNVVLEFTTSTAFNPFNLNKLRNFQCV >gi|257257233|gb|ACDX02000012.1| GENE 5 7736 - 9001 708 421 aa, chain - ## HITS:1 COG:PA1668 KEGG:ns NR:ns ## COG: PA1668 COG3455 # Protein_GI_number: 15596865 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 16 227 61 272 289 141 37.0 3e-33 MDNQNNAAHSIANIYNPLIEAAKPVFILVNAMQQTTSQLSTDSLINKFSILINNFEENAE KNGARYDAIQAAKYCLCTFVDELAVRAGWADETWSKNSLLVSFYDETWGGERFFEIIQNL KQDPDKNIDLLEFMYLCLQFGYKGKYQVLNSGELEIDKIKRDLLALIHSKRPDQTAELFK HNPIITNTIQRKQRLTIPLWVVGVLGAVVLGVGYFAMQWSLGDDFDTASTKVNNLKLPSV TAKQQETQGTIRLRPLLENEIARKLVSVEDFQDRSTVTILGDGLFESGSAQIQDQYYPVL ARVSQALDSVEGQIVVTGYTDDKPIQSLNFPSNWHLSQARADAVKEILLNYIKNGGTRIR SEGRGSTDPVAPNDTLENRAKNRRVEITLFTTGTGPKLGSAVEVKTNTSTTQPSSDVSTH Q >gi|257257233|gb|ACDX02000012.1| GENE 6 9026 - 10369 805 447 aa, chain - ## HITS:1 COG:YPO3597 KEGG:ns NR:ns ## COG: YPO3597 COG3522 # Protein_GI_number: 16123739 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 445 1 447 448 307 37.0 2e-83 MAIEAKVVWSEGIFITPQHFQQFERYLESGLRQLAVSQEGHFWGFSSLVLNSDGLKRGVI GINEAEGVFPDGSVFLFSQKQLENLSLKVPANIKDTKICLAVTLPSSVNNEIYFPNQNSS DSCRYKAFNKTLADTTNTELDGRQVTLADLNPMLVLENDLTSGQTALPIALIRSSSADLE IILDESYIPPCLGSQKQQHLKAYISEIYGLLMQKSNSLANAVNDPNTGGSVEVMDFMMLQ TINRYLAYLHHENEGARQTHPEQLFINLSKLCADLMTFLPSRKVGDIPVYEHNDLASCFG KLFFNLRKSLSIVLEQRAIRIPLDMRDEATRVAQTPDQSLLDKASFVLAIKADMPNEALR QKIPSVVKIGTVEKVKELVAYHLPGIKVHALSVAPRELPYHSGYVYFELDKKHELWDMFD TSSGMAFHLAGNFPNLDVEFWAIKSLS >gi|257257233|gb|ACDX02000012.1| GENE 7 10395 - 10973 311 192 aa, chain - ## HITS:1 COG:PA0080 KEGG:ns NR:ns ## COG: PA0080 COG3521 # Protein_GI_number: 15595278 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 1 121 12 127 154 95 35.0 5e-20 MVSSCASDHKPPKESDESGEKIDVQIIVSPDVNPNIVGQPSPIRLDLYQLSSDGEFKKSN YFELTNNAKENLGDKLIQQNQFMLHPDTVTILPIKMDSHLKYLGVVASYRDLDNSQWQLV LLKQKKRWYQFGKHYFYVNIGKNKLTQLSKPEMLNMLKKYKERHPDNKRIKENGKIRKYD NDLSKGIFREEK >gi|257257233|gb|ACDX02000012.1| GENE 8 11165 - 13816 1258 883 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 8 878 1 814 815 489 34 1e-137 MSNISRSVLFGKLNTTLYKTLENAYTFCRLRENSYVELVHWLHSLLQTEKTDIFCLINSF NLDEARVRKDVLTAVEKLPAGSTAVIDFSEHIQTLVEQTWTYSSLKFGTDKIRTAHIFYT ILENKTLQSIVANISSEFLKIKPETLANNIVAITANSEENLDVTQNALSSEPNATHKESA LTKYGSNLTEKAKNGEIDPLTGRDAEIRQMIDILMRRRQNNPILTGEAGVGKTAVVEALA LRLAAGDVPPGLKDVQLILLDIGLLKAGASVSGEFESRLRAVMDEVESSPTPIVLFIDEI HTLIGAGGAAGTGDAANLLKPALARGKLRTIGATTWAEYKKYFEKDPALTRRFQVVQVDE PDENKAISMLRALNASLEKHHNVIILDEAIQAAVKLSHRYIPARQLPDKAVGLIDTACAR VAVSQHAVPGSIEFLRKKSEALKLEQANLEREKKLSFDSETRITNIGKELTEVEGRLKKL EDRWKSETDLVTELLDVREQIMHAEEGTAEKETKQLYTRQKELVNKLKKLQGIQPLVMPL VDSRTVADVVADWTGIPVGKMMKDEVEAVLQLADTLNKRIIGQRHGLDAISRRIQTSRAN LDNPNKPIGVFMLAGPSGVGKTETALALADTLYGGEQNVITINMSEYQEAHTVSTLKGAP PGYVGYGEGGVLTEAVRRKPYSVILLDEVEKAHPDVHEIFFQVFDKGWMEDGEGRYIDFK NTIIILTTNVGTDLIMDMCDDPEMLPTPEGLTKALRAPMLKTFPAALLGRMQVIPYYPLS DDMLSKIVELQLGRIVDRIKDNHGIDLHYTPEVLKLITSRCTEVESGGRMIDAILTNTVL PQISRELLTSATQGKQILSININASNHDFTYQYKYKPRKKNAL >gi|257257233|gb|ACDX02000012.1| GENE 9 13906 - 14946 785 346 aa, chain - ## HITS:1 COG:PA0089 KEGG:ns NR:ns ## COG: PA0089 COG3520 # Protein_GI_number: 15595287 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 25 344 14 331 348 205 37.0 8e-53 MSPVNAQTDFGDSLDDTWDEKLTGLLNKVASQPYKYDYFSLLRQLESVKFITGGKLLGKA VSPKMEKIRIRQEPSLIFAPRNIQSVALSPRYVEISINGFGLFGPSGPLPLHLTEYAYER QHQHGDRTWTGFANMLQHRLAVLFYRAWANAQSITSLDKNAEDRFGKYIASFNGLDTPTI HNKGLIHEFAKRYFAGLLMKQSRSAANLQQLLNRYFKVPVTIQTNVGYWVEVAEEKTQIG IMGNYTLGDGLLLGDKLYDVQSKFRIIIGPLTLPAYRSFFKDGINTARLREWVRLFAADE YEWDIQPVLMQKEVPLMDLGGRTQLGLTTWLGNVSRDAEDLIVSNH >gi|257257233|gb|ACDX02000012.1| GENE 10 14943 - 16919 1138 658 aa, chain - ## HITS:1 COG:STM0268 KEGG:ns NR:ns ## COG: STM0268 COG3519 # Protein_GI_number: 16763650 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 655 1 624 627 355 32.0 1e-97 MNNKLLSYYNKELTFLKEMGREFAQQYPKIASRLALDTTDIPDPYVERLLEGVSFLTART QLKLDAEYPRFVQRILEVVYPDFINQKPAAAIVNLEPTGQYNADVINLLERGRVLRSLPI DEFKVSCPFSVTKTTEILPLHIEKAKYTDSLGYLPSTLPALKASSGKKVQSALRLDFSLS VPGACSEMLPDELSVFLGTELSKSSALLFLLASECVGVVCHSYENPKQWYYPLSSKPEHR GFREDEALSFNLDKSVSAFRIMQEYARLPEKFLFIAQKDIKQAVRQAENDGHLPKVPEHL EEIVNDKGVNKKIITYRKRYFSLSFLFSNKIPELTELIGVEDFSVNAVPVVNLFRKKSSR FPVNIQAQEHHVVIDRTQPLNYEVYAIEQVKGFDTNNRQTVAFSPMYKAPDMGLFPEAQT QHAYFSARRADRVPSENSVKNGFRSSYLGSEVFLSLADNRDHAFNSGIQHLSVDAWCTSR DLPLMMPRDGESDFLIEGFLPVNSIKLISKLTRPQAAVSEDRTLWSFLNQLSLNYLSLLN VDQEDAPVTLKELLMVFVSSENDLLKKQIESITRVETSTVNKVVRHYGVAAPVRGIKITV TLDEAQLGGIHPFLFGSVLNHYFQRLVSINSFIQLQIDTLQQGHMATWPTAVGERVIV >gi|257257233|gb|ACDX02000012.1| GENE 11 16916 - 17428 371 170 aa, chain - ## HITS:1 COG:STM0269 KEGG:ns NR:ns ## COG: STM0269 COG3518 # Protein_GI_number: 16763651 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 6 157 10 157 164 105 38.0 4e-23 MSQFRNQLLPSLFDRLTDEEPRKKKEARPDQVINLDQYRQAVLRDILYLLNTCNMQAESM EKDLPANVRSSTLNYGIPPLSGVNFSDIEWQDVEQNIKQAIIDFEPRLESKTLQVIVNTV DDDDDALHNKLIIEIKGYLKLNPYPKEFLLRTSMDVETGLFDLLDGGNRS >gi|257257233|gb|ACDX02000012.1| GENE 12 17462 - 18271 582 269 aa, chain - ## HITS:1 COG:YPO2727 KEGG:ns NR:ns ## COG: YPO2727 COG4455 # Protein_GI_number: 16122931 # Func_class: R General function prediction only # Function: Protein of avirulence locus involved in temperature-dependent protein secretion # Organism: Yersinia pestis # 3 265 15 263 268 87 28.0 2e-17 MDLKTKLTDMIELVRSNPDNQEHRLALIQYLCLSAKWEQALKQIGQYQKLFPDTQKPLML YLIENISAEMRRQAVLETQQKPKTLEQHASKLDILQKQLSLVAHVAEKKSSALTADYEAL SDCIDGTPAHITYLLADKSVAETDSNWIMDGDVRTAFVYEFFYQGHYYWQTWDSIESIAF KAPSSLLDIIWRSSEIKFTDGECIQCTSPARYAVLPDAEWSDMLMKCSQTDWVEVAEQLF TGMGQKTLYTDSHDFGLLDIRNIKFGQQR >gi|257257233|gb|ACDX02000012.1| GENE 13 18431 - 18913 748 160 aa, chain - ## HITS:1 COG:STM0279 KEGG:ns NR:ns ## COG: STM0279 COG3157 # Protein_GI_number: 16763662 # Func_class: S Function unknown # Function: Hemolysin-coregulated protein (uncharacterized) # Organism: Salmonella typhimurium LT2 # 1 158 1 159 161 102 32.0 3e-22 MAIDMFMKVEGVNGESKDSNHKDWTNIESFDWGAEQPGSMTSGGGGGAGKVNFNDLTVVA AIDKAAPTILKNCATGQHLSKVEISVCKAGGEQIEYSRTTLEDVLVTGVKFIGVQGNDAL KMRYSFQAAKVKNQYWEQTDKGSKGAEVQMAFNIKENKSA >gi|257257233|gb|ACDX02000012.1| GENE 14 19001 - 20500 1311 499 aa, chain - ## HITS:1 COG:YPO2938 KEGG:ns NR:ns ## COG: YPO2938 COG3517 # Protein_GI_number: 16123123 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 21 497 20 497 500 786 75.0 0 MTEKQLDIQGDSGAKSVFAANEFEQLLQKEFKPKTEEAKSAVNNAVATLAQQALQNAITI SDDTYQTIEAIIAELDRKLSEQINLILHHEDFQKLEGEWRGLHHLVTNTETDTLLKIKVL PISKKEVARNLKRFKGTAWDQSPLFKRIYEEEYGQFGGEPFGCLIGDYYFDHSAPDVEML NSLEKIAAAAHCPFIAGASPKLMQMESWQELANPRDLSKIFQNAEYAPWRSLRDSEDSRY IGLALPRFLSRLPYGATTNPVDEFDFEEETEGADHNKYTWANAAYAMAVNINRSFKYYGW CTSIRGVESGGIVENLPCHTFPTDDGGVDMKCPTEIAISDRREAELAALGFMPLIHRKNT DLAAFIGAQSLHKPSEYYDPDATANARLSARLPYLFACCRFAHYLKCIVRDKVGSFRERE DMERWLNEWIMNYVDGDPINSTQETKARKPLAAAEVVVEEVEDNPGYYTSKFFLRPHYQL EGLTVSLRLVSKLPSAKQE >gi|257257233|gb|ACDX02000012.1| GENE 15 20534 - 21052 586 172 aa, chain - ## HITS:1 COG:YPO2939 KEGG:ns NR:ns ## COG: YPO2939 COG3516 # Protein_GI_number: 16123124 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 4 166 3 165 174 227 74.0 1e-59 MSRNKSSGQKFIARNRAPRVQIEYDVELYGSEKKIELPFVMGVMADLVGKPVEPLPELAE RKFLEIDVDNFDERMKALKPRVAFNVKNTLTGEGNLNVELELESMDDFSPAAIAKKVGPL NELLQARTELANLLSYMDGKSGAEELIGKVLGDSELLKSLAAAPKAASKDEQ >gi|257257233|gb|ACDX02000012.1| GENE 16 21120 - 22187 945 355 aa, chain - ## HITS:1 COG:PA0082 KEGG:ns NR:ns ## COG: PA0082 COG3515 # Protein_GI_number: 15595280 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 1 348 1 344 344 108 27.0 2e-23 MSTFPLWAEPISADTPEGVNIEYDSRFLELQSAAEGKPERQYGDTIIPAEEPDWATVEKL CNQLLVESKDLHVLAYYTQALTAKHGLVGFCAGCEAIKTNVDLYWKSLYPKLEDEDGEPD PFYRINALSAFTTLNGIAKEVFSAKLLVNGLTQQPITVKEAVSVLQGNDPQSYPGGKERL MLDIRVSADTGKPELIALIQALDYLKDIQNTFSTQLQDEHSLNFEVIQKPLTLIHKAINY NDGSTPQLQQAEQTEQPVETPVSTVVQEQSTLQEADAWRRLNIKNRADVDLALEKICIYF ETLEPSHPAPLFIRRVQRQMNMNFYDIMKDISPESIANLEVLIGKPDEETGTSNE >gi|257257233|gb|ACDX02000012.1| GENE 17 22192 - 22743 -3 183 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|255068371|ref|ZP_05320226.1| ## NR: gi|255068371|ref|ZP_05320226.1| type VI secretion-associated protein, BMA_A0400 family [Neisseria sicca ATCC 29256] type VI secretion-associated protein, BMA_A0400 family [Neisseria sicca ATCC 29256] # 1 182 1 182 182 290 79.0 2e-77 MQQMSTYFFGKLNQSRDFIVSENLQANDKNFWDGWFGRCTNQDKLIPFTRKAFFVSRIWL FCVKLPASITYTGITALSSDQTGRQYPFVLFQKPCTPSELLESINFLYGNIDFFNQTLIN GKCVLKDCLDTIHKPTNPLSESFLIFLSQTDNIGSFWMECESGNHIERDGEPTCSLFNKI FGL >gi|257257233|gb|ACDX02000012.1| GENE 18 23122 - 27264 5449 1380 aa, chain + ## HITS:1 COG:STM0291 KEGG:ns NR:ns ## COG: STM0291 COG3209 # Protein_GI_number: 16763674 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Salmonella typhimurium LT2 # 72 1273 172 1273 1364 430 31.0 1e-119 MASFGNTFGVLIPKPAAPAMVSQGSANPPEPLTNAAGPVDVIEMVADVASTALSIVAPDS AAADAVDAISELVSLASMIPGQPGPKPPSRKMVSGFSGGMGMGFDGGIVTSGHGHCIPCK VAAAIGNPVNAVLGIKVLFDDTETDFAFDSPLPLVWQRSYYSDQIGNGWLGQGWSLPFSM RLVRTVDGFLYIDGQGREIPLPDISDEADEPYSAADDDEDDLYEEEAAPRPASAEEDPYG LDNAYFDPYEQIFFSQISDDLYQIASPDGGARLLFAEVDSGCGIFQLVAQLDRNGRHIRL CYDDNGLPHSIYDGSGRYFQPVFSSIRLHDNDPDFDPAGERDVFISEDERFYVNRLTSVI FNGKELVRYDYDGYGDLTAVYGRDGKKLRGFAYRNHIMVEHSQPDGLVSRYEYDRYDTDG KVLKSSNNLGEEWTFDYRKDHTVVTDALGRTEVYGFDENRELIYRIDADGQRSDSERDSY GRITVERDPLGRETRYLYDTEGNVIAITAPDGSSTQIDYHETLNLPVAVNDPAGRVTAYT YDGRGNLISITDPAGYTTSYGYNAQWLPETITDALGKTRRLHYDTLDQLVCFTDCTGETT RFGYTEYGDLETVTDALGHTTRHHYDAAGNPVRTDYPDGSHETFEYDRLNRLTAHIDGLG AKTAYELAVDGLPLKRTNALGHTFAYAYDKARRLTVLTNENGETYRLDYDPTDNLIQETG WDGKITAYGYDAAGQLVQQTEYGQSNHEGRLKDRPETWHIHHFKRNILGQLIEKQSRKVS RKNGQSKDEGISRTRFDYDPITGNLTKARNHHSSVELAYDELDRLIGETTVHNGQSATIG YRYDPLGNRIRTILPDGRHIDYLYYGSGHLHQISLDGEVVSDIERDKLHREIQRTQGGIS SLYDYDPMGRLKSQRTVRSGTQTPRSKQNPPAGGAVNRRYAYDKAGNLIQSADQRSGVLN YVYDKIGRIREARNSQTGRSETFAFDPAHNILSDKAAEGKGSNISSGNRLKEYNGIEYTY DALGNLIYRQLPDGENQYYQYDLENQLVRAEIKKPAGNTEIWEYAYDPFGRRLSKERQDK LAWTSTEPKRTHFVWDGTRLLQEYTYKGSYTYIYTDQDSYEPLAQVFRSNQDEAQYLAYF HNDQIGIPREMTDIHGNLLWYGEYTAWGRLKKDGRVYKDAHQPFRLQNQYFDEETGLHYN LKRYYEPEVGRFVNQDPIKLIGGDNLYQFALNAQEWYDPLGLWRRNAYVGRTPSKVSKTG RAVMQRMLANGEIEGITSEEISKLRRTSQIPEGAVFKDVDGKKYSLRNAHMGHNPEDAVS YWNRCGRYHGAKSQAVRKWMLDPNNYRLEYGPGNCSRGAKSKERYKKPRKPKNGKLPKGC >gi|257257233|gb|ACDX02000012.1| GENE 19 27343 - 27744 411 133 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|288576025|ref|ZP_05978043.2| ## NR: gi|288576025|ref|ZP_05978043.2| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 133 24 156 156 251 100.0 1e-65 MCESRQAKTLQERIDGLMKAWDLIPKPATQFVTPTSGLCSEISGRFKELKDYSKALEWIN IALEARKTVPDGSTFLWAGIIYYELGDMENAYKYFDLAYKELRYTPFSTEDKKYWQFYKQ RKEELNPKKKAKK >gi|257257233|gb|ACDX02000012.1| GENE 20 28000 - 28842 502 280 aa, chain + ## HITS:1 COG:YPO3609 KEGG:ns NR:ns ## COG: YPO3609 COG3209 # Protein_GI_number: 16123751 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Yersinia pestis # 1 141 180 326 456 123 44.0 3e-28 MQEYTYKGSYTYIYTDQDSYEPLAQVFDNAKDGKQYLAYFHTDQIGIPREMTDIHGNLLW YGEYTAWGRLKKDECVYRNAHQPFRLQNQYYDEETGLHYNLMRYYEPEAGRFVNQDPILL LGGSNLYSFASNTNAWFDPLGLKKKRNKKPRRIIPYDDIMDDVDKWSLVPVSQRQKCLIK DKLPSAKQRSVRQNRMMRKDFSRRQKSLIREWERETGHTWPAGATPHHIIPLKNGGSNTW WNLTPVKHPHTGTIHGTGSALRTHLPYSTPTGIINQIVPR >gi|257257233|gb|ACDX02000012.1| GENE 21 28876 - 29376 341 166 aa, chain + ## HITS:1 COG:no KEGG:Dda3937_04645 NR:ns ## KEGG: Dda3937_04645 # Name: not_defined # Def: hypothetical protein # Organism: D.dadantii_3937 # Pathway: not_defined # 15 166 14 166 166 112 37.0 6e-24 MDNFKKILVDIQDLIKSSNGNLINYGKSNFIFKKRYDVSLNEINDFEKKYKVKFPNIYRE FLLTVGSCTLFQDELLPGFDFLAPNELYDWSQQVFEGTDCNLFPNILITISIPRTGEQAG FLLTKENENFGVFFPDIPPEEWEEDTEFEKFEDWLENLMKEKLEEI >gi|257257233|gb|ACDX02000012.1| GENE 22 29679 - 31049 1351 456 aa, chain + ## HITS:1 COG:STM0291 KEGG:ns NR:ns ## COG: STM0291 COG3209 # Protein_GI_number: 16763674 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Salmonella typhimurium LT2 # 3 320 866 1252 1364 208 35.0 2e-53 MGYRYDPLGNRIRTILPDGRHIDYLYYGSGHLHQISLDGEVITDIERDKLHREIQRTQGS ISSLYDYDLMGRLKSPAHPNPVSGNRLKEYNGIEYTYDALGNLIYRQLPNGENQYYQYDL ENQLVRAEIKKPAGNTEIWTYAYDPFGRRLSKERQDKLAWTSTEPKRTHFVWDGSRLLQE YTYKGSYTYIYTDPDSYEPLAQVFDNAKDGKQYLAYFHTDQVGIPREMTDIHGNLLWYGE YTAWGRLKKDERVYKNAHQPFRLQNQYFDEETGLHYNLMRYYEPEAGRFVNQDPIGLLGG DNLYEFSPNINSWFDPLGLSPRNLPGIASGSGNSIGKKWLKGTHGNAGVFPKSVADKLRG KSFDSFDDFRAAFWKEVAKDPKLVEGFSEANKKRMAQGKAPKAAKCQHDGKVSSYQIHHK TPINRGGGVYDMDNMLIVTPKFHKEILDPKYHFGRG >gi|257257233|gb|ACDX02000012.1| GENE 23 31054 - 31272 263 72 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261365165|ref|ZP_05978048.1| ## NR: gi|261365165|ref|ZP_05978048.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 72 1 72 72 117 100.0 2e-25 MLDRLYLIKLIDQLRNFEGSEEDEDVFLEKLENLVTDPNISDYIYWTNMSSEEIADKVLS YKPIILPDLSNS >gi|257257233|gb|ACDX02000012.1| GENE 24 31804 - 32247 222 147 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261365166|ref|ZP_05978049.1| ## NR: gi|261365166|ref|ZP_05978049.1| hypothetical protein NEIMUCOT_05532 [Neisseria mucosa ATCC 25996] hypothetical protein NEIMUCOT_05532 [Neisseria mucosa ATCC 25996] # 1 147 42 188 188 258 100.0 1e-67 MLDTNFKEYLDDEFGRILPENQNKYRELFKRLGFGKINHDFVEFWSTYSDEIYGKIGYLV DLAMDLEDFSSSQTEILRKNIGLPDNYFSLLNNELDDYILYDKNTDEVFFVEAPNIQKFI ENKQFSKHWNSFEYFIKDYLNYNAYYV >gi|257257233|gb|ACDX02000012.1| GENE 25 32546 - 35596 4131 1016 aa, chain + ## HITS:1 COG:STM0291 KEGG:ns NR:ns ## COG: STM0291 COG3209 # Protein_GI_number: 16763674 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Salmonella typhimurium LT2 # 1 881 437 1257 1364 359 32.0 2e-98 MVEHSQPDGLVSRYEYDRYDTDGKVLKSSNNLGEEWTFDYRKDHTVVTDALGRTEVYGFD ENRELVYRIDADGQRSDSERDSYGRITVERDPLGRETRYLYDTEGNVIAITAPDGSSTQI DYHETLNLPVAVNDPAGRVTAYTYDGRGNLISITDPAGYTTSYGYNAQWLPETITDALGK TRRLHYDTLDQLVCFTDCTGETTRFGYTEYGDLETVTDALGHTTRHYYDAAGNPVRTDYP DGSHETFEYDRLNRLTAYIDGLGAKTAYELAVDGLPLKRTNALGHTFAYAYDKARRLTVL TNENGETYRFDYDPTDNLIQETGWDGKITAYGYDAAGQLVQQTEYGQSNHEGRLKERPET WHIHRFKRNILGQLIEKQSRKVSRKNGQSKDEGISRTRFDYDPITGNLTKARNHHSSVEF TYDELDRLIGETTVHNGQSATVGYQYDPLGNRIRTILPDGRHIDYLYYGSGHLHQISLDG EVITDIERDKLHREIQRTQGGISSLYDYDPMGRLKSQRTVRSGTQTPRSKQNPPAGGAVN RRYAYDKAGNLIQSADQRSGVLNYVYDKIGRIQEARNSQTGRCETFAFDPAHNILDIPTS TPSPVGEGKTTAPISDDPQTQGRLKSPANPNLVSGNRLKEYNGIEYTYDALGNLIYRQLP NGENQYYQYDLENQLVRAEIKKPAGNTEIWTYAYDPFGRRLSKERQDKLAWTSTEPKRTH FVWDGSRLLQEYTYKGCYTYIYTDQDSYEPLAQVFHNNRDEAQYIAYFHNDQIGIPREMT DIHGNLLWYGEYTAWGRLKKDERIYKNAHQPFRLQNQYFDEETGLHYNLMRYYEPEAGRF VNQDPIGLLGGGDNFYKFAVNAQGWIDPLGLSRNRLATVGKTPSKVSPTGRAVMQRMLSA KELRGMTADQISSLRRISDIPRSAQFWDAPTKSWQPVRSAHMGHVGEDVVDYWNRRGKFF GQKSPEVRSWMRDSNNYRLEKGAGKGGNCSRGAQNRSRYDMTDPIGPRQKSNYGHD >gi|257257233|gb|ACDX02000012.1| GENE 26 35650 - 36102 319 150 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261365168|ref|ZP_05978051.1| ## NR: gi|261365168|ref|ZP_05978051.1| putative membrane protein, with TPR repeat-containing domain protein [Neisseria mucosa ATCC 25996] putative membrane protein, with TPR repeat-containing domain protein [Neisseria mucosa ATCC 25996] # 1 150 1 150 150 263 100.0 4e-69 MNLDAVNPELESKINDLVCEAYNKPFLEQEKLLKEAFELIPKPVTQWAHPTTMVTIALFE LYYKNQKYEQAKEWLSIALSVADLGTTNAGTYLLAGIFYYDLEKYDEAYKYFDIAYNDAG YYPFSIEDKKYWQFYKQRKDELNPKKKTKK >gi|257257233|gb|ACDX02000012.1| GENE 27 36335 - 36880 276 181 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|288576029|ref|ZP_06394125.1| ## NR: gi|288576029|ref|ZP_06394125.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 2 181 229 408 408 236 92.0 7e-61 MVDVPSLGTLFQTTFIGALTVFGLLHQLSGGIVAVGGDFAVPAGFLDQVVGRVVVETVGF AVFVGEDGQTAGFVVGVGEGMAQRVGAFERQSVHCEFVGGFGTESVDVGGQTVEAVVFEG FVTAVGIVGTDGVACCVVVVAGGMAQRIGNGFEIAVFGVTETGGFAGTVGKADEPVEGVV V >gi|257257233|gb|ACDX02000012.1| GENE 28 36599 - 38803 2808 734 aa, chain + ## HITS:1 COG:STM0291 KEGG:ns NR:ns ## COG: STM0291 COG3209 # Protein_GI_number: 16763674 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Salmonella typhimurium LT2 # 3 603 712 1251 1364 270 34.0 7e-72 MDGLPLKRTNALGHTFAYAYDKARRLTVLTNENGETYRLDYDPTDNLIQETGWDGKITAY GYDAAGQLVQQTEYGQSTDKGRLKERPETWHIHHFKRNILGQLIEKQSRKVSSRNGQSKD EGISRTRFEYDPITGNLTKARNQHSSVELAYDELDRLIGETTVHNGQSATVGYQYDPLGN RIRTILPDGRHIDYLYYGSGHLHQISLDGEVISDIERDKLHREIQRTQGSISSLYDYDPM GRLKSQRTVWSGTQTPSGKQNPLAGGAVNRRYAYDKAGNLIQSADQRSGVLHYVYDKIGR IQEARNSQTGRSETFAFDPAHNILDIPTSTPSPVGEGRGEGKTTAPISDDPQTQGRLKSP ANPNLTAGNRLKEYNGIEYTYDALGNLIYRQLPNGENQYYQYDLENQLVRAEIKKVAGNT EIWTYAYDPFGRRLSKERQDKLAWTSTEPKRTHFVWDGSRLLQEYTYKGSYTYIYTDQGS YEPLAQVFHNNQDETQYLAYFHNDQIGIPREMTDIHGNLLWYGEYTAWGRLKKDERVYRN AHQPFRLQNQYYDEETGLHYNLMRYYEPEAGRFVNQDPIGLLGGDNLYWFAPNAAMWLDP WGLAVVDAIFEMQGHTFTGTNPLDRNPRISSPIQGLSAVNNDKFKMHAEIDAMTQAHDKG LRGGKGVLKIKGKNACSYCKGDIKKMALKLDLDELEVHNHDGTVHKFSKGDLKPVKKGGK GWKKPKKSKKPGAC >gi|257257233|gb|ACDX02000012.1| GENE 29 38832 - 39170 255 112 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261365171|ref|ZP_05978054.1| ## NR: gi|261365171|ref|ZP_05978054.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 112 1 112 112 170 100.0 4e-41 MWNPVGISFDESDDEGLSYIYFDLGNFHYFTLTFNQDEDDKIYLEFNEQTFSIESNNVTY DLKGNILSFDFGEDIQKSLKIEKHIDIEINIDIDMVSFRKTLENIFLAKNRM >gi|257257233|gb|ACDX02000012.1| GENE 30 39319 - 41397 1772 692 aa, chain + ## HITS:1 COG:STM0291 KEGG:ns NR:ns ## COG: STM0291 COG3209 # Protein_GI_number: 16763674 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Salmonella typhimurium LT2 # 47 548 795 1251 1364 247 35.0 6e-65 MVSWDGKITAYGYDAAGQLVQQTEYGQSTDKGRLKERPETWHIHHFKRNILGQLIEKQSR KVSHKNGQSKDEGISRTRFDYDPITGNLTKARNRHSSVELAYDELDRLIGETTVHNGQSA TVGYQYDPLGNRIRTILPDGRHIDYLYYGSGHLHQISLDGEVVSDIERDKLHREIQRTQG SISSLYDYDPMGRLKSQRTVWSGKQNPLAGGAVNRRYVYDKAGNLIQSADQRSGVLNYIY DKIGRIQEARNSQTGRSETFAFDPAHNILDIPTSAPSPVGEGRGEGKTTAPISDDPKTQG RLKSPANPNFISGNRLKEYNGIEYTYDALGNLIYRQLPNGENQYYQYDLENQLVRAEIKK PAGNTEIWTYAYDPFGRRLSKERQDKLAWTSTAPKRTHFVWDGTRLLQEYTYKGSYTYIY TDQDSYEPLAQVFRSNQDEAQYLAYFHNDQIGIPREMTDIHGNLLWYGEYTAWGRLKKDG RVYKDAHQPFRLQNQYFDKETGLHYNLMRYYEAETGRFINQDPIGLLGGENLYRFAPNAQ MWIDRLGLWGDMNGASATISAGGVSETYHSSRTGHAEINGLNDFSRRGLLTGKDVQISNI TGEFRSSGSKPVGMCTNCRAGIFDILKRSGANSVSFPETRGNKVLGMIKIDASDFDDVRK ELRAVRNMAGTDRMRSDAAWKVLHKYNKHGRC >gi|257257233|gb|ACDX02000012.1| GENE 31 41400 - 41996 241 198 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261365173|ref|ZP_05978056.1| ## NR: gi|261365173|ref|ZP_05978056.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 198 1 198 198 355 100.0 8e-97 MKEIIHINESSIEYDPKVGYLNITCELPFICGEGELYVENPNPDDERFTVINIGLSSDDT LEVHLNSGDFVVVKSDMDVNKYLFKKIIGDFRDFSGYNNSDDKFKFIFKDNSLESFDLYR DNDNEDLVFSISLFKEENYYSLIVFEPNRPWQKDEIADFQFDGKQIICHLKNGDIFNSEI VCVPYITDLINNISELLE >gi|257257233|gb|ACDX02000012.1| GENE 32 42261 - 43256 1080 331 aa, chain - ## HITS:1 COG:NMA1185 KEGG:ns NR:ns ## COG: NMA1185 COG3547 # Protein_GI_number: 15794129 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Neisseria meningitidis Z2491 # 9 312 6 310 318 343 60.0 3e-94 MSTQNYAGIDIAKRHFVIGIHGRDKTKTETNNPKGFTHTIDYLHKHNVGLVVMESTGGLE IPLAKTLHRAGFQVVIANPRCTKNYANGFSLAKTDHLDAKMLADYAQALEIKGLVANMLY IPPSEAEEKLEALVKRRSQLVDIRAAEKNRLEQIHESQQQSVKDLIAHLDKLIAELDKDI DSNADAFGGKGQVLTAIKGIGSTTSATLLSMLPELGTVPHKRIAMLAGVVPPPNQSGDTD KKTGCIGGRMAVRNILYMAALTASRFEPTIKAFYERLRAKGKPFKVAINACMHKLLRILN ARMRDYLASLQTKSERQSEQQSEQQPAPQCA >gi|257257233|gb|ACDX02000012.1| GENE 33 43714 - 44004 77 96 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225076968|ref|ZP_03720167.1| ## NR: gi|225076968|ref|ZP_03720167.1| hypothetical protein NEIFLAOT_02020 [Neisseria flavescens NRL30031/H210] hypothetical protein NEIFLAOT_02020 [Neisseria flavescens NRL30031/H210] # 1 91 13 103 178 125 92.0 1e-27 MAAVGQDGADAVAQRVVSVAYGGALAVVDGGFADEAVEFVVGEFDAAVLVAGFGQVAGNG VVFETGAADAFVFALSVAAGNFAALFFDSVGRGCCV >gi|257257233|gb|ACDX02000012.1| GENE 34 43963 - 45654 1459 563 aa, chain + ## HITS:1 COG:STM0291 KEGG:ns NR:ns ## COG: STM0291 COG3209 # Protein_GI_number: 16763674 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Salmonella typhimurium LT2 # 1 428 871 1253 1364 241 39.0 3e-63 MGNRIRTILPDGRHIDYLYYGSGHLHQISLDGEVVSDIERDKLHREIQRTQGSISSLYDY DPMGRLKSQRTVWSGTQTPSGKQNPLAGGAVNRRYAYDKAGNLIQSADQRSGVLNYIYDK IGRIQEARNSQTGRSETFAFDPAHNILDIPTSTPSPVGEGWGEGKTTAPISDDPKTQGRL KSPANPNLTGGNRLKEYNGIEYTYDALGNLIYRQLPNGENQYYQYDLENQLVRAEIKKPA GNTEIWTYAYDPFGRRLSKERQDKLAWTSTDPKRTHFVWDGTRLLQEYTYKGSYTYIYTD QDSYEPLAQVFRNNQDEAQYLAYFHTDQIGIPREMTDIHGNLLWYGEYTAWGRLKKDERV YKNAHQPFRLQNQYYDEETGLHYNLMRYYEPEAGRFVNQDPIGLWGGENLYSFAPNAQEW IDPLGLAAEGTLGTYGKLKGGGNQAHEFIRNKMLELMGETSAGKRLSENPSIAASHERHQ GRDNSNSIHKNEKRLAQKHLGLKSKNQFETSVCKRSGVKQGRIMPSKRQMDVWQGAIRMA GYGPSRARKLRKQAQRYLRSLGY >gi|257257233|gb|ACDX02000012.1| GENE 35 45673 - 45984 292 103 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261365178|ref|ZP_05978061.1| ## NR: gi|261365178|ref|ZP_05978061.1| putative ImpA protein [Neisseria mucosa ATCC 25996] putative ImpA protein [Neisseria mucosa ATCC 25996] # 1 103 1 103 103 197 100.0 2e-49 MLGELKIIDEFADKFDFRMFGPALLEKEVNWPVDYNGNPMLFFIGLPANLLNKELDINLY CNIFITYDHEDDQHIYDLSDKNPEPNKSSCVILSDIRSSKVKK >gi|257257233|gb|ACDX02000012.1| GENE 36 46600 - 47841 927 413 aa, chain + ## HITS:1 COG:YPO3609 KEGG:ns NR:ns ## COG: YPO3609 COG3209 # Protein_GI_number: 16123751 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Yersinia pestis # 36 280 90 337 456 174 40.0 4e-43 MGEGWGEGKTTAPISDDPKTQGRLKSPANPNLTGGNRLKEYNGIEYTYDALGNLIYRQLP NGENQYYQYDLENQLVRAEIKKPAGNTEIWTYAYDPFGRRLSKERQDKLAWTSTEPKRTH FVWDGSRLLQEYTYKGSYTYIYTDQDSYEPLAQIFRNNQDETQYLAYFHNDQIGIPREMT DIHGNLLWYGEYTAWGRLKKDERVYKDAHQPFRLQNQYFDEETGLHYNFFRYYEPDTGRF INQDPIGLFGGDNLYSFGNQVLDFIDPLGLKIYGYRKNGTFRKKPGPKSKKKSAGKGECI QNKKDGDAREALHKKDLDAQYGADRILSQKHLRNKKGEIVSDPLTGESRKLDFVIKGAGK NGGGHAQEVTSKTASKSSQLAKEERIRDVGGVYVRDGKSLVHVDGISEIIRLP >gi|257257233|gb|ACDX02000012.1| GENE 37 47851 - 48174 323 107 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261365182|ref|ZP_05978065.1| ## NR: gi|261365182|ref|ZP_05978065.1| putative DNA polymerase III protein [Neisseria mucosa ATCC 25996] putative DNA polymerase III protein [Neisseria mucosa ATCC 25996] # 1 107 1 107 107 201 100.0 2e-50 MDMTLFNFQTLWEANSDEDYREDIIRMSIALMTFLKKNGLLVDIEPFNEDGSIKEDLIIR KSNVTDEGFQLFVKPVNNWWNALDRGTPPEKVTILENGLKKIRAAKK >gi|257257233|gb|ACDX02000012.1| GENE 38 48255 - 48908 711 217 aa, chain + ## HITS:1 COG:YPO3609 KEGG:ns NR:ns ## COG: YPO3609 COG3209 # Protein_GI_number: 16123751 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Yersinia pestis # 2 201 106 308 456 141 41.0 1e-33 MGNLIYRQLPNGENQYYQYDLENQLVRAEIKKPAGNTEIWTYAYDPFGRRLSKEHQDKLA WTSTDPKRTHFVWDGTRLLQEYTYKGSYTYIYTDQDSYEPLAQVFDNAKDGKQYIAYFHT DQVGIPKEMTDIHGNLLWYGEYTSWGRLKKDERVYKDAHQPFRLQNQYYDEETGLHYNLM RYYEPEAGRFVNQDPIGLWGARIFIRLRRMRKLGLIR >gi|257257233|gb|ACDX02000012.1| GENE 39 49447 - 49932 352 161 aa, chain + ## HITS:1 COG:no KEGG:Psyr_4987 NR:ns ## KEGG: Psyr_4987 # Name: not_defined # Def: hypothetical protein # Organism: P.syringae_B728a # Pathway: not_defined # 3 159 34 200 202 67 33.0 2e-10 MAPDGHELALIAFIPIENLLAIAPQFEKDFQEKEYKDKAIYVFSYYDEEDYFLDYITEID DAIQGYTKVIIGDKNQFKFNLENFYPINPIENLDEMSFLGGQPEYLQQEGSDFSEKYIFI GQILGMDLPEKVNEIFYLTGNVGYIFINRDLSGGLFFVQAT >gi|257257233|gb|ACDX02000012.1| GENE 40 50141 - 51478 2078 445 aa, chain + ## HITS:1 COG:PA2684 KEGG:ns NR:ns ## COG: PA2684 COG3209 # Protein_GI_number: 15597880 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Pseudomonas aeruginosa # 20 395 267 647 1317 228 37.0 3e-59 MPPPTAAHGLTSVTFNGKELVRYDYDGYGDLTAVYGRDGKKLRGFAYRNHIMVEHSQPDG LVSRYEYDRYDTDGKVLKSSNNLGEEWTFDYRKDHTVVTDALGRTEVYGFDENRELVYRI DADGQRSDSERDSYGRIAVERDPLGRETRYLYDTEGNVIAITAPDGSSTQIDYHETLNLP VAVNDPAGRITAYTYDGRGNLISITDPAGYTTSYGYNAQWLPETITDALGKTRHLHYDTL DRLVCFTDCTGETTRFGYTEYGDLETITDALGHTTRHHYDAAGNPVRTDYPDGSHETFEY DRLNRLTAHIDGLGAKTAYELAVDGLPLKRTNALGHTFAYAYDKARRLTVLTNENGETYR LDYDPTDNLIQETGWDGKITAYGYDAAGQLVQQTEYGQSNNEGRLKERPETWHRAVCFFI LVGLSINRNTLVGFGTNRGTNDRSQ >gi|257257233|gb|ACDX02000012.1| GENE 41 51927 - 52127 257 66 aa, chain - ## HITS:1 COG:no KEGG:NLA_13200 NR:ns ## KEGG: NLA_13200 # Name: not_defined # Def: hypothetical protein # Organism: N.lactamica # Pathway: not_defined # 1 66 31 96 96 110 93.0 2e-23 MIGRLFRIFFFFALAALIINRLFSRKQKRALRDVAKISAWVLLGAAAATLFWYLVMLYFK HIPDSY >gi|257257233|gb|ACDX02000012.1| GENE 42 52285 - 53424 1174 379 aa, chain + ## HITS:1 COG:NMB0940 KEGG:ns NR:ns ## COG: NMB0940 COG2021 # Protein_GI_number: 15676833 # Func_class: E Amino acid transport and metabolism # Function: Homoserine acetyltransferase # Organism: Neisseria meningitidis MC58 # 1 378 1 378 379 772 97.0 0 MSQNASVGIVTPQKIPFEMPLVLENGKTLPRFDLMIETYGELNVEKNNAVLICHALSGNH HVAGRHSAEDKYTGWWDNMVGPGKPIDTERFFVVGLNNLGGCDGSSGPLSINPETGREYG ADFPVVTVKDWVKSQAALADYLGIEQWAAIVGGSLGGMQALQWTISYPERVRHALVIASA PKLSTQNIAFNDVARQAILTDPDFNEGHYRSHNTVPARGLRIARMMGHITYLAEDGLGKK FGRDLRSNGYQYGFGVEFEVESYLRYQGDKFVGRFDANTYLLMTKALDYFDPAADFGDSL TRALQNVKAKFFVASFSTDWRFSPERSKELVKALIAAHKPVQYIEVKSNHGHDAFLMEDE AYMRAVAAYMNNVDKDCRS >gi|257257233|gb|ACDX02000012.1| GENE 43 53421 - 54002 923 193 aa, chain + ## HITS:1 COG:NMA1135 KEGG:ns NR:ns ## COG: NMA1135 COG0500 # Protein_GI_number: 15794081 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Neisseria meningitidis Z2491 # 1 193 1 193 193 393 94.0 1e-110 MNLRDDLQLIYDWIPEGSRVLDLGCGDGELLAALVEHKKCSGYGIEIDTDSVIAAMSRGV NVIQADLEQGLAEFGDQTFDVIVLSQTIQAMQNTEKILRCLMRVAKQAIVSFPNFGYWRN RFQIAIGGHMPVSERMPYHWYDTPNIHWCTLKDFDLLCAKNKIRVLERAVMTGNKQVKHF PNLLGSLAFYRVG >gi|257257233|gb|ACDX02000012.1| GENE 44 54257 - 55294 671 345 aa, chain + ## HITS:1 COG:yi5B KEGG:ns NR:ns ## COG: yi5B COG2801 # Protein_GI_number: 16131429 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 74 340 2 277 283 215 44.0 1e-55 MDTRLSGRRHRRTRTSPIQNHDRPPQKPLHRRQTRPRKNTGRAYRRVVLYARKGCLPKGV KSPQPKADRKGQSQTVQTLRAQHPLKYLLHIANLPKSSFYYHHQDRPDPDAADKALIAEI YERHKGRYGQRRIAAALDWNRKKVARLMKQMELKALIRAKKAYRHPAMGEISEHLLKRRF TAKKPNEKWLTDVTELKGKDGKLYLSPILDLFNREIVAYAMSRNANSDMVKEMLEKAAPR LTDKGTMLHSDQGVLYRTAGYRELLAEHSMVQSMSRKANCWDNAPMESFFAVLKTECFYR AGELTVDELMKQIDDYMDYYNRERCSLKLKKLSPVAYRTQLTQSA >gi|257257233|gb|ACDX02000012.1| GENE 45 55383 - 57368 3233 661 aa, chain - ## HITS:1 COG:NMB1682 KEGG:ns NR:ns ## COG: NMB1682 COG0187 # Protein_GI_number: 15677530 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Neisseria meningitidis MC58 # 1 661 1 661 661 1306 97.0 0 MTKNNQYSESSITVLKGLEPVKERPGMYTRTDSPTHICQEVIDNAADEALGGFATEIDVR IHDDGSLSVHDNGRGIPVGLHPVEGVPVVELVFTRLHAGGKFNKKDGGSAYAFSGGLHGV GVSVTNALSTRLEVTVKREGKIHRIVFAGGDVVEPLAEVGKCAVKDSGTEVRVWPDGKYF ESPNYSIPELERLLRAKAVLLPGVRVSLTRPVKGEEEAQTQTWHYPDGLKSYLTDLIADA QEAVPLFSCENYISDDHNGDFSIGEGAAFALTWLEEGSCTNESYVNLIPTPLGGTHEAGL KQAVFNAVNNFINLHNLLPRGVKVQSDDVFSKTAFVLSARVLDPQFQGQTKDKLTNRDAL KLVAAVSGDPLELWLNQNVDYGKKIAELAIRQAQARMRSVKKIEKKKGSGVAVLPGKLTD CESEDIRENELFLVEGDSAGGSAKLARDKATQAILPLRGKVLNSFEVHPDQLFGNAEIHD ISVAIGVDPHGINDNPDLSGLRYGKIAILSDADVDGSHIQVLLLTLFYRHFPKLVADGHI YVAQPPLFRVDVNAQGKSKPARKFYALDQNELDSILERLQKEGVKETAYSISRFKGLGEM NPDQLKDTTMHPDTRRLLQVQIPEGADDETRDIFVKLMGKGEAAVRRAWMEREGDTAELD I >gi|257257233|gb|ACDX02000012.1| GENE 46 57438 - 57962 626 174 aa, chain - ## HITS:1 COG:NMB1683 KEGG:ns NR:ns ## COG: NMB1683 COG0494 # Protein_GI_number: 15677531 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Neisseria meningitidis MC58 # 1 174 1 174 174 312 92.0 2e-85 MLDREGYRPNVGIILINNRNEVFWGKRVREHSWQFPQGGIKPGESPETAMYRELYEEVGL LPQHIKIVGRTRDWLRYDVPSHWVRREWRGSYRGQKQIWYLLRLVGRDSDINLRACHHPE FDGWRWHQYWAPVDEVIDFKRDVYLGALKELSSRFLRGMESYEDFTARLPFDNR >gi|257257233|gb|ACDX02000012.1| GENE 47 58309 - 59103 848 264 aa, chain + ## HITS:1 COG:lin0912 KEGG:ns NR:ns ## COG: lin0912 COG2116 # Protein_GI_number: 16799984 # Func_class: P Inorganic ion transport and metabolism # Function: Formate/nitrite family of transporters # Organism: Listeria innocua # 8 255 6 252 270 250 52.0 2e-66 MASRDLYPQEILQVVLDKSCAKAQSSVSTLAVLSVLAGGYIGFGYLAYLKVVSGIPHEWG GLATLLGASMFPIALICILLGGGELVTSNMMIMSLGRLAGRISTKMLLRNWVVVCLGNLA GTLAMAFFLGHYVGMTEGSVAEKTIAVAEAKVHMDFGRAFVSAVACNWMVCMGAWLHFAA KHTAGRMFAIWFPVMIFVLNGFQHLVANMFIIPAGILAGADITWGQFFFNMIPVFLGNTF GGASFVGASYLYTYKDTLKDCAES >gi|257257233|gb|ACDX02000012.1| GENE 48 59222 - 60721 2273 499 aa, chain + ## HITS:1 COG:YPO2336 KEGG:ns NR:ns ## COG: YPO2336 COG0657 # Protein_GI_number: 16122560 # Func_class: I Lipid transport and metabolism # Function: Esterase/lipase # Organism: Yersinia pestis # 71 271 55 242 334 68 32.0 2e-11 MNTLNKTLLSVSVALGLNACANVQTAKTYDLDFSKQKYTEQSIEVNGQAVKFRAYENVVY VRNPVDTRYEIINIYVPEAYYNGGEIDGFTAETAPIFLPNQIGGYMPAEPGKPALEGKRG EPEDGQKSPNAALTALSKGYVVASPGARGRTEPTGKAPAAIVDLKAAVRYLKANDKAMPG DAEKIISNGTSAGGAMSALLGATADQKDYENHLKALGAAEGSDKVFAVSAYCPITDLDHA DMAYEWQFNGVNGYKKMNISMLDYRVKRELVAGTLTDDEKKLSDLLKPLYPAYLNSLNLK SPEGKPLTLDAQGNGSFKNHIAGLLAQSAQIQLDAGKDLSDRAWLTVRNGKVVSVDFDAY AKAAGRQKTPPAFDGVDLSAGENQLFGNNTVDKRHFTAFSMQHNTAANAEIADEETVKIM NPLNYIGKPGANLPQNWRIRVGTNDRDTSLAVSAILAAKLQNNGYTVDYALPWDVGHGGD YDLDELFAWMKQVSRSTEK >gi|257257233|gb|ACDX02000012.1| GENE 49 60796 - 62187 1157 463 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 [Haemophilus influenzae 22.4-21] # 8 457 3 445 456 450 51 1e-125 MQSFLENLKAFFETVSGWVWGPVMLVLLVGTGVLLTVMLKGLQFSMLGYALKQAFMPQKT TDDGEDHEGDISHFAALMTALSATIGTGNIAGVATAVVTGGPGAVFWMWMTAIFGMATKY AEGVLAVKYRVTNSKGEMSGGPMYYIEKGLGKNWKWMALAFALFGTFASFGIGSSVQSNS VAQAVQTSFGVEPGYTGVVLTILTAIVVLGGIKGIAKAASFIVPAMAVFYVLGGIAIIAV NADLLAPAVKLIFSDAFSAQAVAGGAIGTVIRYGVARGVFSNEAGMGSAPIAAAAAKTDH PVRQALVSMTGTFLDTIVVCSITGIVLVMGLLGAGGEFVKPELSGAALTTVTFQKMLPGF GGWVVTIGLIFFAYSTILGWCYYGEKCAAYVFGEKSANLYRVFYVASVMLGTVLSLDLVW LASDTFNGLMALPNLIALLLMAKVIVRETQDFKQKIRSGELPH >gi|257257233|gb|ACDX02000012.1| GENE 50 62766 - 63134 421 122 aa, chain - ## HITS:1 COG:mll5649 KEGG:ns NR:ns ## COG: mll5649 COG2967 # Protein_GI_number: 13474703 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein affecting Mg2+/Co2+ transport # Organism: Mesorhizobium loti # 3 111 8 116 130 98 43.0 2e-21 MNNIEISVKPRYIAGQSDVYRDRYAFNYQITICNRSNEVITLRQRFWEVTDGHGEIGQVG HGGLIEEQPVLYPGEEYEYNSGSQISTPWGSIEGAYEFEDSIGERFIIGVPKLDFKAGFT LQ >gi|257257233|gb|ACDX02000012.1| GENE 51 63238 - 63726 340 162 aa, chain - ## HITS:1 COG:NMA2102 KEGG:ns NR:ns ## COG: NMA2102 COG1267 # Protein_GI_number: 15794977 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylglycerophosphatase A and related proteins # Organism: Neisseria meningitidis Z2491 # 1 158 1 158 161 193 70.0 1e-49 MAEFKPTFKWLKERPLCFLGFGFGSGLSPVAPGTAGTLAALPLAFVLHLIGIGGWVLALL CIAMFVWGIRICGYTEKELGIQDYGGIVWDEIVAMILVLSFVPFRWSWWLAAFIVFRLFD MLKPWPIKWFDSRIHGGLGIMLDDLIAALMTGLVLGLASWIF >gi|257257233|gb|ACDX02000012.1| GENE 52 63719 - 64675 733 318 aa, chain - ## HITS:1 COG:NMA2103 KEGG:ns NR:ns ## COG: NMA2103 COG0611 # Protein_GI_number: 15794978 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate kinase # Organism: Neisseria meningitidis Z2491 # 1 318 1 318 318 444 69.0 1e-124 MTEFDFIRQFLQKQQAEGLVLGIGDDAAIIRPSIGFDLCFSSDMLIKDKHFFSDVSPEDL AWKMLAVNISDMAAMGAVPKWVLLSAGLPDLDEEWLTRFCESFFSQAQRFGITLIGGDTT KGDLVFNITIIGELPQGQALRRDAAQEGDDIWVSGQIGMAAAALNHRLKNCTLPPEVFGL CEDKLLRPDPRVDLGLALLPLAHAAQDISDGLAQDLEHILTASSLGAEISTDVLPVPDEL RTSLSEEQWTAFALSGGDDYELVFTASADRRSEILAAAAQCGVAVTRIGKTNNSGRLKIK NKKGDELLLTSRGFDHFG >gi|257257233|gb|ACDX02000012.1| GENE 53 64826 - 65617 635 263 aa, chain - ## HITS:1 COG:NMA1946 KEGG:ns NR:ns ## COG: NMA1946 COG0084 # Protein_GI_number: 15794829 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Neisseria meningitidis Z2491 # 1 258 26 283 284 463 89.0 1e-130 MNLTDTHCHLADPALRENLPHVLTAAREAGVGRFIVPATRPQDWQDMADLAQRSSENPLW GNIHIALGIHPWFSDDVSEPDFQRLEQLLQARPTAWVGEIGLDFYDKTQTPPQRERQIQV FSRQLAIAQTLRRRVIIHNLKATADIAAAVKQTGFAQGGIVHAFSGSAEEARVLTKLGFK IGIGSLLLNPNARKIRETLKTLNDTDFVLETDSPFMLKNEINTPANIRPIAAIAAEIRGV AVEEIAEATERNVEMLLAAEKVV >gi|257257233|gb|ACDX02000012.1| GENE 54 65625 - 66626 1408 333 aa, chain - ## HITS:1 COG:NMB1688 KEGG:ns NR:ns ## COG: NMB1688 COG0252 # Protein_GI_number: 15677536 # Func_class: E Amino acid transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D # Organism: Neisseria meningitidis MC58 # 1 333 1 333 333 608 93.0 1e-174 MMSMKQKIFVLYTGGTIGMTQSSEGLRPDTALVSQALSPFSDDLDFEWHVCKPLIDSSSV TLQHWRDWLDIIVAKLPSCDGILILHGTDSMAYTANLLALALQGLDKPIVLTGSQWPYAA ENSDAPRNLSTAVAAFNLKLKQTVIAFDGKLYPAVGSSKVSTETAAGFDNPHFGAIAEWD ETQGWHNIYVPSQDAADVSDDLKIRYPDPQAKIAVRTLIPGFAVQELADGLGQLPAQALI LQSYGHGNTPADEGFIRAVRDFTQQGKLLLNISQVQQGRTAAVYAQGNAFRNSGIINGGK CNLETATALMTLAVSQGWGAEDVEKELVRLQLL >gi|257257233|gb|ACDX02000012.1| GENE 55 67063 - 67746 908 227 aa, chain - ## HITS:1 COG:NMB1689 KEGG:ns NR:ns ## COG: NMB1689 COG0586 # Protein_GI_number: 15677537 # Func_class: S Function unknown # Function: Uncharacterized membrane-associated protein # Organism: Neisseria meningitidis MC58 # 1 208 1 208 227 350 85.0 9e-97 MFAFLEALFANYGYAAVFFVLVICGFGVPIPEDLTLVTGGVISGLGHTNSHWMVVVGMLG VLAGDGFMFVAGRVWGQKILKFKPIARVMTPKRYAQVQEKFDKYGNWVLFVARFMPGLRT AVFVTAGISRKVSYTRFILMDGLAALISVPVWIYLGEYGANNIDWLMAKMHSLQSGIFVV LGVGAVILAWFWWKKRQRLLFYRTKLSEKRAERKAAKAAKKAAQSEQ >gi|257257233|gb|ACDX02000012.1| GENE 56 68052 - 69389 1984 445 aa, chain - ## HITS:1 COG:NMA1949 KEGG:ns NR:ns ## COG: NMA1949 COG1109 # Protein_GI_number: 15794832 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Neisseria meningitidis Z2491 # 1 441 1 441 444 833 95.0 0 MAKKYFGTDGVRGEVGQFPITPDFVLKLGYAAGQVLVQHDGGQKPTVLIGKDTRISGYML EAALVAGFTAAGVNVIQTGPLPTPGVAYLTRALRLSAGVMISASHNVYSDNGIKFFAEGG VKLSDEIELEIEAKIDEEMKTQPSARLGRARRINGADDRYIEFCKSTFPSHLDLRGLKLV VDTAHGAGYDVAPKVFHELGAQVVSIGDEPNGYNINEKCGATHPKALQAAVLQNEADYGI ALDGDGDRLMMVDRNGKVYDGDSLIYVIAKARAREGINIGGVVGTVMTNMAMEIALKEQG VDFCRAKVGDRYVLEQLNQRGWLIGGEASGHILCMDKHNTGDGIISALQVLAALQILNQD LATVCADWQPYPQTMINVRIQKGQKWQEASKDVLAEVEKELEGKGRVVLRASGTEPVVRV MVEARQADWAKKGAERIAAAITGKQ >gi|257257233|gb|ACDX02000012.1| GENE 57 69832 - 70686 1034 284 aa, chain - ## HITS:1 COG:NMB1691 KEGG:ns NR:ns ## COG: NMB1691 COG0294 # Protein_GI_number: 15677539 # Func_class: H Coenzyme transport and metabolism # Function: Dihydropteroate synthase and related enzymes # Organism: Neisseria meningitidis MC58 # 1 281 1 283 285 482 91.0 1e-136 MTTRIWQAGRFEIGLDKPKIMGIVNLTPDSFSDGGVYSQNAQTALAHAEQLLKEGADILD IGGESTRPGADYVSPEEEWVRVAPVLAEVAGWGVPVSLDTRRTVIMEKALALGVVDIIND VAALTDEGAVELLARQADTGICLMHMQGLPETMQINPKYQDVVGEVVRYLKARSAECTAA GIVPQRIALDPGFGFGKTLQHNIALMRHLPELMAETGFPLLIGVSRKRMIGELTGETNAA ERVHGSVAAALASVARGAQIVRVHDVKATADALKVWDALGITGI >gi|257257233|gb|ACDX02000012.1| GENE 58 70832 - 72025 1652 397 aa, chain + ## HITS:1 COG:NMB1678 KEGG:ns NR:ns ## COG: NMB1678 COG1448 # Protein_GI_number: 15677526 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Neisseria meningitidis MC58 # 1 397 1 397 397 766 95.0 0 MYRHVEYYPGDPILSLVETFKNDPRPEKVNLSIGIYFDDEGKMPVLESVNRAETARAATP APSPYLPMEGLDTYRSAVQHLLFGKDNPALAQGRIVTVQTLGGSGALKVGADFLHRWFPA ARAYVSDPTWDNHRGIFEGAGFEVGTYPYYDPATVGVKFDEMTAFFNTLPEHSVLILHPC CHNPTGVDMSEQQWDKVLHIIKTRKLIPFMDIAYQGFGGDLDSDAYAIRKAVEMELPLFV SNSFSKNLSLYGERVGGLSVVCPNKEEAELVFGQLKFTVRRIYSSPPAHGAYIAADVMNN PELYALWQNEVYVMRDRIRAMRQKLYDVLTAQIPDRDFTYFIKQRGMFSYTGLSVEQVRR LRDEFAVYLLDSGRMCVAGLNASNIAYVADAFAEVLK >gi|257257233|gb|ACDX02000012.1| GENE 59 72492 - 73349 1093 285 aa, chain + ## HITS:1 COG:NMA1936 KEGG:ns NR:ns ## COG: NMA1936 COG3245 # Protein_GI_number: 15794819 # Func_class: C Energy production and conversion # Function: Cytochrome c5 # Organism: Neisseria meningitidis Z2491 # 1 285 1 279 279 405 80.0 1e-113 MKQLRDSKAQGSALFTLVSGIIIAIAVIYFLIKLAGSGSFADVNQSSEAATQTRIQPVGQ LALGDGIPVGERKGDQIFNKICFQCHAADSSVPNAPKIENNGDWAPRIGQGFDTLFQHAL NGFNAMPAKGGAADLTDQELKRAITYMANKSGGNFPDPDAAAPADQAASGDAAASAPAAA GSAPAADAPKADDKGAAAPAAGGADGQKVYEANCKACHGGAIPGVPHVGKKEDWAPRIKQ GKETLYKHALEGFNAMPAKGGNAGLSDDEVKAAVNYMANQSGAKF >gi|257257233|gb|ACDX02000012.1| GENE 60 73819 - 74733 1142 304 aa, chain - ## HITS:1 COG:NMA0506 KEGG:ns NR:ns ## COG: NMA0506 COG1464 # Protein_GI_number: 15793505 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Neisseria meningitidis Z2491 # 3 289 1 286 287 456 88.0 1e-128 MQVNTFFKTLSAATLAVVLAACGGQKDSAPAASSASPAADNGAAKKEIVFGTTVGDFGDM VKDQIQPALEKKGYTVKLVEFTDYVRPNLALAEGELDINIFQHKPYLDDFKKEHKLDITE TFQVPTAPLGLYPGKLKSLDEVKDGSSVSAPNDPSNFARALVMLNELGWVKLKDGVNPLT ASKADIAENPKNIKIVELEAAQLPRSRADVDFAIVNGNYAMSSGMKLTEALFQEPSFAYV NWAAVKTSDKDSQWLKDVTEAYNSDEFKAYAHKRFEGYKYPAAWGENAATGAKAEAASTA SAAK >gi|257257233|gb|ACDX02000012.1| GENE 61 75059 - 76072 429 337 aa, chain - ## HITS:1 COG:NMA2106 KEGG:ns NR:ns ## COG: NMA2106 COG0583 # Protein_GI_number: 15794980 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Neisseria meningitidis Z2491 # 22 337 1 316 316 553 84.0 1e-157 MLNCPSFVVQIIQVNIEHEPFMKLQQLRYALEVYRHNLNVSEAAEALFTSQPGISKQIRL LEEELGVQIFIRSGKRVVSVSQPGKAVLEIADRILRDVQNIKNIGSEFTEHDSGSLVVAT THTQARYALPLIVAEFVKRYPKVTLTIKQGSPAAIAQMVSNGEADIAIVTERIDEHPELG KLTCYEWNHAVIVPHEHPLLDCKNPLSIEDLASFPLITYEFAFNQGSSIARAFNKARLEQ PDVVLSAADTDVLKTYVRLGLGVGLMAKMAYDPENDTDLELVDASHLFESSPTWIAVRKD TYLRGYAYDFIELFAPKLTREMVDRTLYAPVVEDFSI >gi|257257233|gb|ACDX02000012.1| GENE 62 76451 - 77212 945 253 aa, chain + ## HITS:1 COG:NMB0382 KEGG:ns NR:ns ## COG: NMB0382 COG2885 # Protein_GI_number: 15676296 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein and related peptidoglycan-associated (lipo)proteins # Organism: Neisseria meningitidis MC58 # 1 224 1 237 242 310 72.0 1e-84 MTKQLKLSALFVALVASGTAMASEPHTKHGYVVSSQSQEVVRNNYGECWRNSYFDKETQG RVECGDREAVAAVQQAPEYVDETVSLSSKTLFGFDKDNLRPEAQENLDALAQRLSNENVQ TVRVEGHTDFMGSEEYNQALSERRANVVANYLVGRGVPSSKVSAVGLGESQAQMTATCEA EVAKLGKKVSKAKKRAALIACIEPDRRVDVKIRSTVTKQVTPGQTIEGQGERPAVDEGWI PSPYNGVHGYAKP >gi|257257233|gb|ACDX02000012.1| GENE 63 77391 - 78686 1725 431 aa, chain - ## HITS:1 COG:NMA1943 KEGG:ns NR:ns ## COG: NMA1943 COG0172 # Protein_GI_number: 15794826 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Seryl-tRNA synthetase # Organism: Neisseria meningitidis Z2491 # 1 431 1 431 431 812 94.0 0 MLDIQQLRSHTAAVAERLAQRGYEFDTARFNALEEQRKAVQVKTEELQASRNSISKQIGA LKGQGKHEEAQAAMDQVAQIKTDLEQAAADLDAVQKELDAWLLSIPNLPHESVPAGKDET ENVEVRKVGTPREFDFEIKDHVDLGEPLGLDFEGGAKLSGARFTVMKGQIARLHRALAQF MLDTHTLKHGYTEHYTPYIVDDTTLQGTGQLPKFAEDLFHVTRGGDESKKTQYLIPTAEV TLTNTVADSIVAGSDLPLKLTAHSPCFRSEAGAYGKDVRGLIRQHQFDKVEMVQIVHPEK SYEALEEMVGHAENILKALELPYRVITLCTGDMGFGATKTYDLEVWVPAQNTYREISSCS NCEDFQARRMKARFKDENGKNRLVHTLNGSGLAVGRTLVAVLENHQNADGSINIPAALQP YMGGVEKIEIK >gi|257257233|gb|ACDX02000012.1| GENE 64 78899 - 79270 622 123 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|241760375|ref|ZP_04758470.1| ribosomal protein S6 [Neisseria flavescens SK114] # 1 123 1 123 123 244 98 1e-63 MRHYEIVFIVHPDQSEQVPAMVERYKAMIAEASGKIHRLEDWGRRQLAYPINKIHKAHYV LMNIETTPEVVEELETAFRFNDAVLRHLTIKTKHAVTEASPMLGGEKAKNLLNGAAEEVA AAE >gi|257257233|gb|ACDX02000012.1| GENE 65 79360 - 79569 125 69 aa, chain + ## HITS:1 COG:NMA1536 KEGG:ns NR:ns ## COG: NMA1536 COG2965 # Protein_GI_number: 15794429 # Func_class: L Replication, recombination and repair # Function: Primosomal replication protein N # Organism: Neisseria meningitidis Z2491 # 1 69 32 100 100 104 75.0 3e-23 MLKHESWQEENGQKCLVSFEIPARILGKQAEEWQYRQDTMVEAEGFLAQRSKRFPRPILR IQNIKEYKG >gi|257257233|gb|ACDX02000012.1| GENE 66 79576 - 79806 388 76 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225075138|ref|ZP_03718337.1| hypothetical protein NEIFLAOT_00138 [Neisseria flavescens NRL30031/H210] # 1 76 1 76 76 154 100 2e-36 MARQSFKRRKFCRFTAEKIQEVDYKQVDLLKDFISENGKIIPARITGTKAHYQRQLATAV KRARFLALLPYTDQHK >gi|257257233|gb|ACDX02000012.1| GENE 67 79823 - 80275 700 150 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|59801015|ref|YP_207727.1| 50S ribosomal protein L9 [Neisseria gonorrhoeae FA 1090] # 1 150 1 150 150 274 94 1e-72 MQIILLEKIGGLGNLGDIVTVKNGYARNFLIPAGKAKRATEANMKEFEARRAELEAKQAE ILADAKARQEKLDGQTITIAQKAGVDGRLFGSVTNADIAAAIVASGVEAAKSNVRLPNGP LKAVGEYEVEVALHTDAVAAITVAVVAAAE >gi|257257233|gb|ACDX02000012.1| GENE 68 80388 - 81470 1195 360 aa, chain + ## HITS:1 COG:NMB1279 KEGG:ns NR:ns ## COG: NMB1279 COG2951 # Protein_GI_number: 15677146 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-bound lytic murein transglycosylase B # Organism: Neisseria meningitidis MC58 # 2 360 4 369 369 488 67.0 1e-137 MKKLIPSIAISTALLLVACNTTKTNVESAKTVEPINQSKNQRPAFDSAAESVASSGFNAN TNVRQFIRYEAAKKQFTEAELQNFFNGVVYKGNIINIMYRPSTSRPWYEFRTGNSGASKF NGGKQFYAANRAVIDDVARKYGVPAELIVAIIGIETNYGKNTGSFRVADALSTLGFDYPR RAEFFQNELIELLLMAKEEKENVFDFKGSYAGAMGMPQFMPSSYRKWAVDYDGDGHRDIW NNIGDVAASVANYMKQHGWKTGGKMIVPVNLTITPDLKAIIDEKTALNRTVADFKAMGVV PQQAVADNEKAVLFSLETSPGVFEYYLGLNNFYTVWQYNNSRMYVTAVRDIANAINNNGL >gi|257257233|gb|ACDX02000012.1| GENE 69 81593 - 82111 450 172 aa, chain - ## HITS:1 COG:no KEGG:Apre_1390 NR:ns ## KEGG: Apre_1390 # Name: not_defined # Def: aldose 1-epimerase # Organism: A.prevotii # Pathway: not_defined # 1 147 65 209 235 67 28.0 3e-10 MAQHGFGRTSTWQIRYQNESNVGLRLISTAKGYENVEWLLDYSLPNENEAVATLTVCNYG DASVRTSPGFHPYFPAVGTQFDFNGAPYDADYIAHTEFVASPSDTHVAFDGLKLDIRTQN LPVYALWSDRNGQYTCAEPTAEGNAFLSPARGGQFVSGHGKKHYGMKIRLIA >gi|257257233|gb|ACDX02000012.1| GENE 70 82125 - 82586 274 153 aa, chain - ## HITS:1 COG:SP0016 KEGG:ns NR:ns ## COG: SP0016 COG3335 # Protein_GI_number: 15899965 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 42 152 1 111 112 140 57.0 1e-33 MPKVYLDETGFDTFYYRPYAYALRGQIVKARISGKRYERMSLVAARGDRELVAPMIYKGT MDSSLFEAWFGQFLLKELKEPSVIIMDNARFHRMAVLREMAQRAGHIILPLPPYSPELNP IEKVWANIKRHLRKVMSGCLSFEQALLGIFCFV >gi|257257233|gb|ACDX02000012.1| GENE 71 82622 - 82954 264 110 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148984739|ref|ZP_01818007.1| IS630-Spn1, transposase Orf1 [Streptococcus pneumoniae SP3-BS71] # 1 110 7 116 116 106 41 5e-22 FRQKALDHYEQHGNISQTARTFRITNRTLYQWIALKKETGSLQHRTKGGNSERIDKEELR RYVAEHPDAYQYEIAQHLGCTASNVGYLLKTLKITRKKRQPSTKNKTSKK >gi|257257233|gb|ACDX02000012.1| GENE 72 82757 - 82939 84 60 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|288576051|ref|ZP_05978102.2| ## NR: gi|288576051|ref|ZP_05978102.2| hypothetical protein NEIMUCOT_05594 [Neisseria mucosa ATCC 25996] hypothetical protein NEIMUCOT_05594 [Neisseria mucosa ATCC 25996] # 1 60 60 119 119 100 100.0 3e-20 MFCHIASQFFFVDTFRIAAFGAVLQRTCFLFKGNPLVKGSVGNAEGACGLADVAVLFVVV Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:06:36 2011 Seq name: gi|257257231|gb|ACDX02000013.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont12.1, whole genome shotgun sequence Length of sequence - 79204 bp Number of predicted genes - 72, with homology - 70 Number of transcription units - 49, operones - 17 average op.length - 2.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 2 - 617 242 ## COG2801 Transposase and inactivated derivatives 2 1 Op 2 . - CDS 380 - 730 387 ## NLA_8450 transposase - Prom 905 - 964 4.0 3 2 Tu 1 . + CDS 986 - 4204 3851 ## COG1330 Exonuclease V gamma subunit 4 3 Tu 1 . + CDS 5033 - 7573 2286 ## COG1629 Outer membrane receptor proteins, mostly Fe transport + Term 7614 - 7650 3.5 - Term 7844 - 7888 9.1 5 4 Op 1 . - CDS 7906 - 8145 248 ## COG3042 Putative hemolysin 6 4 Op 2 . - CDS 8243 - 9010 713 ## COG0501 Zn-dependent protease with chaperone function - Prom 9038 - 9097 3.5 - Term 9080 - 9114 6.0 7 5 Tu 1 . - CDS 9126 - 10067 763 ## COG1686 D-alanyl-D-alanine carboxypeptidase - Prom 10091 - 10150 7.0 8 6 Tu 1 . + CDS 10388 - 11656 253 ## PROTEIN SUPPORTED gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 + Term 11684 - 11739 13.2 + Prom 11761 - 11820 4.0 9 7 Tu 1 . + CDS 11896 - 14481 3561 ## COG1049 Aconitase B + Term 14545 - 14594 7.3 - Term 14533 - 14582 6.5 10 8 Tu 1 . - CDS 14626 - 15498 463 ## COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase - Prom 15638 - 15697 6.0 + Prom 15484 - 15543 2.5 11 9 Tu 1 . + CDS 15626 - 17800 1822 ## COG2982 Uncharacterized protein involved in outer membrane biogenesis + Term 17805 - 17853 12.4 - Term 17789 - 17845 17.4 12 10 Tu 1 . - CDS 17866 - 18897 1492 ## COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase - Prom 18933 - 18992 7.5 + Prom 18916 - 18975 3.3 13 11 Tu 1 . + CDS 19214 - 19612 354 ## COG0526 Thiol-disulfide isomerase and thioredoxins + Prom 19667 - 19726 4.2 14 12 Op 1 2/0.158 + CDS 19953 - 20390 659 ## COG1846 Transcriptional regulators 15 12 Op 2 2/0.158 + CDS 20403 - 20903 473 ## COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 16 13 Tu 1 . + CDS 21028 - 21723 879 ## COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) + Prom 21805 - 21864 3.9 17 14 Tu 1 . + CDS 21949 - 22986 701 ## COG2801 Transposase and inactivated derivatives + Term 23129 - 23179 5.2 - Term 23122 - 23160 8.6 18 15 Op 1 2/0.158 - CDS 23169 - 25010 1845 ## COG3307 Lipid A core - O-antigen ligase and related enzymes 19 15 Op 2 . - CDS 25010 - 25369 180 ## COG3308 Predicted membrane protein - Prom 25404 - 25463 4.6 - Term 25431 - 25482 17.0 20 16 Tu 1 . - CDS 25505 - 26155 988 ## COG0778 Nitroreductase - Prom 26183 - 26242 10.7 - TRNA 26329 - 26404 84.9 # Asn GTT 0 0 - Term 26424 - 26460 2.1 21 17 Op 1 . - CDS 26516 - 27016 468 ## gi|288576068|ref|ZP_05978125.2| conserved hypothetical protein - Prom 27054 - 27113 5.9 - Term 27074 - 27111 7.1 22 17 Op 2 . - CDS 27116 - 27589 718 ## COG2846 Regulator of cell morphogenesis and NO signaling - Prom 27717 - 27776 2.1 + Prom 27739 - 27798 4.1 23 18 Op 1 17/0.000 + CDS 27824 - 28660 858 ## COG0555 ABC-type sulfate transport system, permease component + Term 28680 - 28711 2.7 + Prom 28727 - 28786 4.2 24 18 Op 2 17/0.000 + CDS 28842 - 29702 1354 ## COG4208 ABC-type sulfate transport system, permease component 25 18 Op 3 . + CDS 29699 - 30772 1774 ## COG1118 ABC-type sulfate/molybdate transport systems, ATPase component + Term 30788 - 30837 16.5 - Term 30775 - 30826 18.5 26 19 Op 1 . - CDS 30921 - 31982 1683 ## COG3541 Predicted nucleotidyltransferase 27 19 Op 2 . - CDS 32017 - 32703 781 ## gi|261365248|ref|ZP_05978131.1| hypothetical protein NEIMUCOT_05632 - Prom 32724 - 32783 2.7 28 20 Tu 1 . - CDS 32868 - 33626 1006 ## COG3541 Predicted nucleotidyltransferase - Term 33633 - 33683 13.5 29 21 Op 1 2/0.158 - CDS 33716 - 35008 2017 ## COG0141 Histidinol dehydrogenase 30 21 Op 2 2/0.158 - CDS 35005 - 35901 1029 ## COG3680 Uncharacterized protein conserved in bacteria 31 22 Tu 1 . - CDS 36005 - 36658 1008 ## COG0040 ATP phosphoribosyltransferase - Prom 36869 - 36928 2.3 - Term 36882 - 36930 11.2 32 23 Tu 1 . - CDS 36940 - 37653 991 ## COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems + TRNA 37943 - 38027 78.6 # Leu CAA 0 0 + Prom 37952 - 38011 80.4 33 24 Op 1 . + CDS 38226 - 38405 97 ## gi|261365254|ref|ZP_05978137.1| prophage PSPPH01, site-specific recombinase, phage integrase family 34 24 Op 2 . + CDS 38409 - 39014 611 ## gi|261365255|ref|ZP_05978138.1| transposase 35 25 Op 1 6/0.000 - CDS 38935 - 39396 273 ## COG3335 Transposase and inactivated derivatives 36 25 Op 2 . - CDS 39432 - 39782 294 ## PROTEIN SUPPORTED gi|148984739|ref|ZP_01818007.1| IS630-Spn1, transposase Orf1 37 25 Op 3 4/0.000 - CDS 39846 - 40148 404 ## COG3587 Restriction endonuclease 38 25 Op 4 . - CDS 40159 - 42126 1147 ## COG2189 Adenine specific DNA methylase Mod - Prom 42156 - 42215 3.6 - Term 42192 - 42241 13.8 39 26 Tu 1 . - CDS 42252 - 44621 2776 ## COG0514 Superfamily II DNA helicase + Prom 44738 - 44797 3.3 40 27 Tu 1 . + CDS 44957 - 45403 505 ## NLA_20400 lipoprotein + Term 45444 - 45506 6.4 - Term 45438 - 45488 4.2 41 28 Op 1 2/0.158 - CDS 45595 - 46164 126 ## COG0009 Putative translation factor (SUA5) 42 28 Op 2 . - CDS 46220 - 47554 1371 ## COG0151 Phosphoribosylamine-glycine ligase - Prom 47621 - 47680 4.0 + Prom 47477 - 47536 3.7 43 29 Tu 1 . + CDS 47651 - 47968 349 ## NMO_0026 hypothetical protein + Term 47977 - 48032 12.1 - Term 47967 - 48018 14.2 44 30 Op 1 2/0.158 - CDS 48022 - 48633 319 ## COG1739 Uncharacterized conserved protein 45 30 Op 2 29/0.000 - CDS 48696 - 49631 869 ## COG2025 Electron transfer flavoprotein, alpha subunit 46 30 Op 3 2/0.158 - CDS 49642 - 50391 950 ## COG2086 Electron transfer flavoprotein, beta subunit - Prom 50509 - 50568 5.7 - Term 50447 - 50485 2.3 47 31 Op 1 2/0.158 - CDS 50617 - 51585 639 ## COG0859 ADP-heptose:LPS heptosyltransferase 48 31 Op 2 . - CDS 51622 - 52257 399 ## COG1335 Amidases related to nicotinamidase - Prom 52283 - 52342 6.0 + Prom 52242 - 52301 4.2 49 32 Tu 1 . + CDS 52372 - 53046 803 ## COG1720 Uncharacterized conserved protein + Term 53074 - 53125 17.0 - Term 53453 - 53494 1.4 50 33 Tu 1 . - CDS 53559 - 54563 1570 ## COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase - Prom 54756 - 54815 7.2 + Prom 55040 - 55099 5.5 51 34 Tu 1 . + CDS 55130 - 56044 1234 ## COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase + Term 56065 - 56104 9.1 - Term 56300 - 56348 14.1 52 35 Tu 1 . - CDS 56373 - 58142 1828 ## COG0405 Gamma-glutamyltransferase - Prom 58283 - 58342 3.4 + Prom 58423 - 58482 6.2 53 36 Tu 1 . + CDS 58626 - 60074 2300 ## COG0362 6-phosphogluconate dehydrogenase + Term 60097 - 60143 6.1 - Term 60234 - 60294 12.3 54 37 Tu 1 . - CDS 60333 - 61283 1202 ## COG1052 Lactate dehydrogenase and related dehydrogenases - Prom 61304 - 61363 5.4 55 38 Op 1 . + CDS 61567 - 61785 336 ## COG3205 Predicted membrane protein + Prom 61841 - 61900 3.9 56 38 Op 2 . + CDS 61958 - 62218 531 ## gi|261365277|ref|ZP_05978160.1| L-lactate dehydrogenase + Term 62242 - 62300 14.4 + Prom 62261 - 62320 3.9 57 39 Tu 1 . + CDS 62383 - 62712 629 ## COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 + Term 62756 - 62814 15.6 + Prom 62780 - 62839 3.6 58 40 Tu 1 . + CDS 62861 - 64255 2169 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases + Term 64257 - 64313 17.0 - Term 64528 - 64576 10.1 59 41 Tu 1 . - CDS 64600 - 65898 2112 ## COG0612 Predicted Zn-dependent peptidases - Prom 65925 - 65984 1.8 - Term 66234 - 66270 6.1 60 42 Tu 1 . - CDS 66346 - 68202 236 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 - Prom 68288 - 68347 3.6 - Term 68398 - 68447 9.2 61 43 Op 1 . - CDS 68481 - 68609 100 ## - Term 68624 - 68669 14.6 62 43 Op 2 . - CDS 68677 - 69513 1117 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - Prom 69692 - 69751 4.6 - Term 69970 - 70014 6.2 63 44 Tu 1 . - CDS 70053 - 71564 190 ## PROTEIN SUPPORTED gi|163739394|ref|ZP_02146805.1| 50S ribosomal protein L36 - Prom 71779 - 71838 4.2 + Prom 72714 - 72773 4.6 64 45 Tu 1 . + CDS 72904 - 73011 117 ## + Term 73052 - 73098 11.0 - Term 73045 - 73082 8.0 65 46 Op 1 . - CDS 73129 - 74067 1547 ## COG3842 ABC-type spermidine/putrescine transport systems, ATPase components - Prom 74128 - 74187 2.1 66 46 Op 2 . - CDS 74193 - 75071 1113 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - Prom 75100 - 75159 4.9 + Prom 75145 - 75204 3.7 67 47 Op 1 2/0.158 + CDS 75226 - 75822 965 ## COG0288 Carbonic anhydrase 68 47 Op 2 14/0.000 + CDS 75881 - 76492 965 ## COG1057 Nicotinic acid mononucleotide adenylyltransferase 69 47 Op 3 14/0.000 + CDS 76594 - 76947 630 ## COG0799 Uncharacterized homolog of plant Iojap protein + Term 76961 - 76994 5.4 70 47 Op 4 . + CDS 77057 - 77527 916 ## COG1576 Uncharacterized conserved protein + Term 77692 - 77751 19.1 + TRNA 77664 - 77740 85.0 # Met CAT 0 0 + Prom 78000 - 78059 4.0 71 48 Tu 1 . + CDS 78083 - 78433 296 ## PROTEIN SUPPORTED gi|148984739|ref|ZP_01818007.1| IS630-Spn1, transposase Orf1 - Term 78829 - 78871 4.6 72 49 Tu 1 . - CDS 78883 - 79203 110 ## COG3547 Transposase and inactivated derivatives Predicted protein(s) >gi|257257231|gb|ACDX02000013.1| GENE 1 2 - 617 242 205 aa, chain - ## HITS:1 COG:yi5B KEGG:ns NR:ns ## COG: yi5B COG2801 # Protein_GI_number: 16131429 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 74 196 2 132 283 89 42.0 3e-18 MDTRLSRRRHRRTRTSPIQNHDRPPQKPLHRRQTRPRKNTGRAYRRVVLYARKGCLPKGV KSPQPKADCKGQSQTVQTLRAQHPLKYLLHIANLPKSSFYYHHQDRPDPDAADKALIAEI YERHKGRYGQRRIAAALDWNRKKVARLMKQMELKALIRAKKAYRHPAMGEISEHLLKRRF EARKPNEKWLTDVTELKGRTANCTS >gi|257257231|gb|ACDX02000013.1| GENE 2 380 - 730 387 116 aa, chain - ## HITS:1 COG:no KEGG:NLA_8450 NR:ns ## KEGG: NLA_8450 # Name: not_defined # Def: transposase # Organism: N.lactamica # Pathway: not_defined # 1 116 106 221 221 206 94.0 2e-52 MSKYTLHFKYQAVLHYLHIRSQQRTADHYGISRTHLRRWIRAYQEGGIGALEHPQSKTMT DHRKNPFIVDKPDHEKTQAELIEELCYMRAKVAYLKELKALSQKRTAKDKAKPSKH >gi|257257231|gb|ACDX02000013.1| GENE 3 986 - 4204 3851 1072 aa, chain + ## HITS:1 COG:NMA1974 KEGG:ns NR:ns ## COG: NMA1974 COG1330 # Protein_GI_number: 15794857 # Func_class: L Replication, recombination and repair # Function: Exonuclease V gamma subunit # Organism: Neisseria meningitidis Z2491 # 1 1072 1 1069 1069 1545 72.0 0 MFYLYQSNRLESLAALFAGIQRVRPLESALAAEQIVVQSQGMRRYLSVYLARELGVAANL QFSLPAGLTWQLMQKLIPDIPALSPFSPEVMRWRLLDLFRSERFQTTSEFENVRSVLQSY LGSGESADYQLAGQLADIFDQYLVYRPQWIDAWQEGKLLGLGEDEVWQAQLWRYLDDGNQ SAPHRVALWEKLLSSLDKAHLPERFFVFGISTMAPMYLQLLQKISEHCDVFVFALNPSGQ YWGNVIEAAQLLKGGDEADLSQTGHPLLASLGKQGRDFFDFLTEIGLEEQPVFEEVSDDT LLHCLQNDIQNLRMPSEHSRADLLDDGSVRIVSAHSPLRELQILKDKLLRILHEHPDWQP HDIAVLTPNIEPYSPFIEAVFGQAQGGAQALPYSVSDVKLSRRQPLLYALEQTLDLLESR FEVDKVLPLLESGLVLRRFGLTADDLPLLHDTIAELNVHWGLDGTMRGAADNLFTWQQAL ERIVLGWMLPDDGSPLWQNVSAWHGDVNRLDVFGRFAAFIRTLSRLAAEWRKPAAAEEWT ERCRDLVQSLFLPDADDQYALQQFEQALAKWQEETALAGFSGTLPQHTVIRHIRRFLGSE SQAGFLRGGITFCSMVPMRSLPFKVICLLGLNDGDFPRNTKAAVFDLIAKHPQKGDRARR DDDRYLFLEAIISARDILYLSYVGRSIRNDDELAPSALVSELIDTVAAMTGRRSKELAEQ WVEQHPLQPFSHRYFIPDNISDDLFSTRQDYAEALNRPREQARPFFSEALEENSPAPNVW QDDFILFWKNPVKAWLQQTLGWREPYRDEAWESAEPFEPQRADKIAAAYLDARRQNQDFQ ETAVRLDAESLLPAGELGKLWQQNFQAAAKRIDGELLQSPKLPPFAYEIQFDGQTLQGSL GNLYQCGQVFYLDRKPNAPQRIALLLEHLIFCAVGSAVGSSETETRQTYIVQPEETTPYP EIPSSQAQQMLQKWLTFFNLGQTRPLPFFAKTSLAAAEAYGKKQSWEDALNKAKESYHGN KVSKGQKDYTEVALVFGNEDTEPVEGALFQRLVEELLIPLLDAVKEESSDAA >gi|257257231|gb|ACDX02000013.1| GENE 4 5033 - 7573 2286 846 aa, chain + ## HITS:1 COG:NMA1700 KEGG:ns NR:ns ## COG: NMA1700 COG1629 # Protein_GI_number: 15794593 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Neisseria meningitidis Z2491 # 1 846 83 922 922 1112 65.0 0 MPGVFTQQDKGSGVLAVNIRGDSGLGRVNTMVDGVTQTFYSTSADAGRSGSSSQFGTALD PNFIAGVDVTKGSFSGANGINTLSGTANFRTLRVDDVVHGNHTFGLLTKGLTGTNSTKSN FMATGAVQKWFDSGARLGALYGYSHRNVEQNYKVGGGGQRIGNFGEEYLDRKKQEYFESN LLKFDQGQNRWVRDFSKRNAVGKSYWEYPFSKKYNDPEVLQRDYVDDLERSWKENLAPQW DLTPIDPTSLQQRSNSHLVKVEYENDNNKLDLQLRTMNNRIGSRKVENRNYQANYNLNIG DYVDLNVLAAHNLGKQKYPKNSRFSGWGLLDYLETKNTANLLDINNRFSFNLPNKTDLKA TVGFNFFKNQYSKNRFPEELSLFYDGPDQDAGLYSFLGRFKGDKGIFPQKSTILQPSGQQ KFNTFYFDTSLKKGIYQLNYSTNMVNYRYKGEYTDYFNTQEDFKKAFGEDSEIYKQHCTP SCDLYEPVYTKSGKKHAVNHSVALNINVNDYFMPFISYSRTHRMPNIQEMYFSQIGDSGV NTALKPEQANTYQIGFNTFKKGIFKPDDVLGFKLVAYRSRINNYIHNVYGKWWDLDKAPS WVTSTGLQYSIQHRNYAKPVHKNGLEVEMNYDFGRFFSTLSYAYQKTNQPTNYSDASESP RNSSKEDQIKQGYGLSKISRLPRDYGRFELGSRWLGNKLTIGGIMRYYGKSTRATTEEEF VDGTTGANTYSSHQMGRRAIKKTESINRQPLIFDFYANYEPKKNLILRFDIQNAFNKRYI DPLDAANDAATQRYFSVFERKGGLDDEEVECDANGLCNGKYGGTTRSVLNNYARGRTLLF TISYKF >gi|257257231|gb|ACDX02000013.1| GENE 5 7906 - 8145 248 79 aa, chain - ## HITS:1 COG:NMB0772 KEGG:ns NR:ns ## COG: NMB0772 COG3042 # Protein_GI_number: 15676670 # Func_class: R General function prediction only # Function: Putative hemolysin # Organism: Neisseria meningitidis MC58 # 29 77 22 70 71 72 59.0 2e-13 MIKPIILSLAAATTLAACNILETESVPMTGMPNPASEFCVKQGGKLELKKDKDGGEYGMC HLPDGIVVEEWAYFRQHNK >gi|257257231|gb|ACDX02000013.1| GENE 6 8243 - 9010 713 255 aa, chain - ## HITS:1 COG:NMA0562 KEGG:ns NR:ns ## COG: NMA0562 COG0501 # Protein_GI_number: 15793554 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Zn-dependent protease with chaperone function # Organism: Neisseria meningitidis Z2491 # 14 255 30 282 293 250 50.0 2e-66 MNKISKKYGLWLGVAALAGCTSVADMVGYDTAALNEGAERNYTQVVQKARSQNALDVSSP TAQRVHRVFSRLVPYANRANRTGIPFNWQMNVIRSNDLNAWAMPGGKMAVYTGMVERLQL TDDEIAAVIGHEMTHALLEHSKKAIGGQVLTGLGGSILAGAVGLDGNLVGVGTDLLATKP FSRHQESEADAGGVRLMAQAGYNPQAAISVWEKMNRVQGGSQVAILSTHPANNTRIEAIR RMLPEVMPIYHQNKR >gi|257257231|gb|ACDX02000013.1| GENE 7 9126 - 10067 763 313 aa, chain - ## HITS:1 COG:NMA0962 KEGG:ns NR:ns ## COG: NMA0962 COG1686 # Protein_GI_number: 15793919 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Neisseria meningitidis Z2491 # 30 313 29 312 312 421 80.0 1e-118 MSVMKFYKTLSAACLGIALTVAAAPAAADDMDVLGQFLEQNFPTQNDPMEAFALSHAQKI EAQAMMAGPLLTSQAALIFNNKTGEILYQKNADRVMPIASISKLMSAMIVLDARLDMNEP ITITADEIDRLKGTGSRLAIGTTLTRGELLHLSLMSSENRATHALGRTYPGGMSAFVAAM NAKAQSLGMYSSRFYEPTGLNFQNVSTANDLNRMVAAASKYPLINKNSTSNYGSVWTANG RQNYKNSNALVREGSWNIELQKTGYIREAGRSMVVKANVQNQPITIVLLNSPTSTTRVND ARKIESWMLQRRS >gi|257257231|gb|ACDX02000013.1| GENE 8 10388 - 11656 253 422 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 [Bacillus selenitireducens MLS10] # 156 403 258 451 466 102 29 8e-21 MTEEKRSCSFCGKSEHEVKNLIEGENAFICNECVETCGVMLQSSDDLSEEKSATDASHPN NKLPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRLRHPKANGNVELSKSNILLIGPT GSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQRGIV YIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDTT NILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSKDENADITGLFEIVEPEDLIKFGLIP ELIGRLPVIATLAELDEDALVNILTEPKNALVKQYQTLFGMENVQLEFEEEALRSIARQA MERKTGARGLRSIVERCLLDTMYQLPDLKGVTKVVIDKDVIEKGKQPKLLREDGSEYQAN AQ >gi|257257231|gb|ACDX02000013.1| GENE 9 11896 - 14481 3561 861 aa, chain + ## HITS:1 COG:NMA1761 KEGG:ns NR:ns ## COG: NMA1761 COG1049 # Protein_GI_number: 15794654 # Func_class: C Energy production and conversion # Function: Aconitase B # Organism: Neisseria meningitidis Z2491 # 1 861 1 861 861 1699 98.0 0 MLEAYRKAAAERAALGIPPLPLNAQQTADLVELLKNPPAGEGEFLVELLAHRVPPGVDDA AKVKASFLAAVAEGSASSPLVSPEYATELLGTMLGGYNIHALIELLDDDKLAPIAAKGLK HTLLMFDSFHDVQKKAEKGNKYAQEVLQSWADAEWFTSRAKVPEKITVTVFKVDGETNTD DLSPAPDAWSRPDIPLHALAMLKNPRDGINPDKPGEVGPIKLLEELKAKGHPVAYVGDVV GTGSSRKSATNSVIWHTGEDIPFVPNKRFGGVCLGGKIAPIFFNTQEDSGALPIEVDVSA LKMGDVVDILPYEGKIVKNGETVAEFSLKSQVLLDEVQAGGRINLIIGRGLTAKAREALK LPASTEFRLPQAPAESKAGFTLAQKMVGRACGLPEGQGVRPGTYCEPRMTTVGSQDTTGP MTRDELKDLACLGFSADMVMQSFCHTAAYPKPVDVRTHKELPAFISTRGGVSLRPGDGVI HSWLNRLLLPDTVGTGGDSHTRFPIGISFPAGSGLVAFAAATGVMPLDMPESVLVRFSGK LQPGVTLRDLVNAIPLYAIKQGLLTVAKAGKKNIFSGRILEIEGLPDLKVEQAFELTDAS AERSAAGCTVKLNKEPIIEYMKSNVVLMKNMIADGYQDPRTLERRIKAMEKWLANPELLE ADKDAEYAAVIEINMDDIKEPIIACPNDPDDVCFMSERSGTKIDEVFIGSCMTNIGHFRA ASKLLEGKSDIPVRLWVAPPTKMDAKELSDEGHYGVLGRAGARMEMPGCSLCMGNQAQVH EGATVMSTSTRNFPNRLGKNTFVYLGSAELAAICSKLGKIPTVEEYQANIGIINEQGDQI YRYMNFNEIDSYNEVAETVNV >gi|257257231|gb|ACDX02000013.1| GENE 10 14626 - 15498 463 290 aa, chain - ## HITS:1 COG:NMB1692 KEGG:ns NR:ns ## COG: NMB1692 COG2876 # Protein_GI_number: 15677540 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Neisseria meningitidis MC58 # 1 288 1 288 297 311 51.0 1e-84 MIIVMGKNASQESVEGVIGFIRNKGLKEHVSRGEERTIIGAVGDERVFRPNELERLPDVE RVVRVLNDWKIISREADEEDSRIVVRGVIFGGAKLLDITADTDRVQKADAVFVDPFYLPA RPYEKVDEQRENLRVRAIVQEISDLQKTGKPVIVRIRDVRQIDEALSASADILYLGGSMM TNRTLLDEVGRLNTPVVLCKDKHHRVDDWLVAAEHIALRGNSHIMLGEAGTLSFEPEHAY RLDVDAIVRVRKVCRLPVIANITRLWHNDMPQEILYRLAAAAGVNGIISG >gi|257257231|gb|ACDX02000013.1| GENE 11 15626 - 17800 1822 724 aa, chain + ## HITS:1 COG:NMA1951 KEGG:ns NR:ns ## COG: NMA1951 COG2982 # Protein_GI_number: 15794834 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized protein involved in outer membrane biogenesis # Organism: Neisseria meningitidis Z2491 # 24 718 45 738 740 678 51.0 0 MCYTFSYVTLLPLRMKNPLLNSGKFWLKTVVTAVILLVCTAAALYASVYALFTPERIETT VQNAFSGTGRNIRFSSDIRRSWFPRPTVTLKNVTITRPHSNQTALHIKETRIGLGWSSLW NDYPFIEKWVITGADAVLSRTDDGKWNLQDLLHPSHPTSLNRLIIENSSLHMNIAGQAHI IDNFYLNVRNDGADGRPFKINGSLRRPNQSIQWQGSGVFNASKTGWSIPNLLWEASVAEK ESKLSADGNGTWTWSSENDSLKADNLSLRTDNPAQNFHLTAQIPRLSLKNNVLNIPSLNG AFTAGKPESQWNGSFKLDKASIRTSVATLDNFEFNASHKNAAHQTNLTLTGPLLWQQNKG LQSSPINLTTLQDTVNRLPNPRFISQLTGSFNWNGKENWQGDFKGTFDRQPFALVFKYQP TEGETPLLEAGIALQKLSLLPYWDDIQANSGSGYPTILNNGQIPQIDANIKIGNVQIPGL QLDNIETLLNADKEHIALSHFKAGLYGGQTEGGISMANTTPPTYHLQQDAQNVQIRPLLQ DLFGFHSFSGNGDAVIDLTARGNNRKQLIQSLQGMLTLNILDGAWKGIDINHILKNGISS QHPGGEHAQTPFNRFTLNSEIDKGISHHINTELFSEHLHIVSNGYTDLNTQELSEDLLIR NTLNPSAKPIPLKIRGNVANPSVTLDYNRITHGLNNPKEKQKALEQTLREQWHWLNPERK QSDK >gi|257257231|gb|ACDX02000013.1| GENE 12 17866 - 18897 1492 343 aa, chain - ## HITS:1 COG:NMB0207 KEGG:ns NR:ns ## COG: NMB0207 COG0057 # Protein_GI_number: 15676134 # Func_class: G Carbohydrate transport and metabolism # Function: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase # Organism: Neisseria meningitidis MC58 # 1 343 1 343 343 615 89.0 1e-176 MGIKVAINGYGRIGRQVLRAIYDYNLQDQLEVVAVNASGSLETNAHLTKFDTVHGRFNAD ISHDATHLIINGRKIPFFSTRNPAELPWKDLEVDLVMECTGAFTSKSKANVHLESGAKKV LISAPGEADVDATVVYGVNDDVITDDMTVVSNASCTTNCLSPVAKVLNENIGIVKGVMTT IHALTNDQTVTDVRHKDLRRARSGVENMIPTKTGAAKAVGLVLPELKGKLDGLAIRVPTV NVSVVDLSFQAARDTSVEEINALMKAAAEEGRLKGVLSYNTLPLVSMDFNHTTQASTFDA TLTKVIDGNMVKVFAWYDNEWGFSCQMLNTARRMFGLEVRPFE >gi|257257231|gb|ACDX02000013.1| GENE 13 19214 - 19612 354 132 aa, chain + ## HITS:1 COG:NMB1845 KEGG:ns NR:ns ## COG: NMB1845 COG0526 # Protein_GI_number: 15677681 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Neisseria meningitidis MC58 # 2 131 39 168 169 163 52.0 6e-41 MSSEPLYLLSGETLTPALLSANRTAVLYVWGDWCHICAYTSPTVSRLAEDGIPVVGIALH SGADEHIRTYMSEKHLDFPTVNDNDGRLAQKWKVSVTPSIILIKNGKMVHFTSGISTYWG LRARIFISDLFY >gi|257257231|gb|ACDX02000013.1| GENE 14 19953 - 20390 659 145 aa, chain + ## HITS:1 COG:NMA0613 KEGG:ns NR:ns ## COG: NMA0613 COG1846 # Protein_GI_number: 15793603 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Neisseria meningitidis Z2491 # 1 144 1 144 146 219 88.0 2e-57 MPNQSKHASINIGLIQAREALMTQFRPILNQANITDQQWRIIRLLAENGTLDFQDLANQA CILRPSLTGILTRLEKAGLVVRLKPSNDQRRVYLKLTNEGEKLFESIGAQVDERYDAIEQ VLSKEKMLELKELLTALSKIEQHLK >gi|257257231|gb|ACDX02000013.1| GENE 15 20403 - 20903 473 166 aa, chain + ## HITS:1 COG:NMA0614 KEGG:ns NR:ns ## COG: NMA0614 COG1853 # Protein_GI_number: 15793604 # Func_class: R General function prediction only # Function: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family # Organism: Neisseria meningitidis Z2491 # 1 166 1 166 166 268 75.0 3e-72 MTDSAHTLKHPFRDAMASCAAGVHVITTDGESGRYGITMTAVTPVTDEPPTIMLCINRKS AIIPILQTNRDLCINTLSESQQDIAEHFAGLTGLSPEERFAYHIWNRGETGQLEVEGALA HLHGRIVSRHEIGTHFIFYVEINEIKNSGTHPPALLYFRRQFKSLE >gi|257257231|gb|ACDX02000013.1| GENE 16 21028 - 21723 879 231 aa, chain + ## HITS:1 COG:NMB1841 KEGG:ns NR:ns ## COG: NMB1841 COG1208 # Protein_GI_number: 15677677 # Func_class: M Cell wall/membrane/envelope biogenesis; J Translation, ribosomal structure and biogenesis # Function: Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) # Organism: Neisseria meningitidis MC58 # 1 231 1 230 231 300 68.0 2e-81 MKAMILAAGRGERMRPLTDHTPKPLLQVGSEPLIGWHLRRLKTAGFTEIVINHAWLGEQI ETTLGDGSQYGVRIAYSPEKAGGLETAGGIATALPLLGDAPFLVVNGDVLTDIDFSKARQ AAEALTHSDKLACLWLVDNPPHNPDGDFALLANGLASSDKSAGEALTFSGVGVYRFELFR DTPPHQPAKLAPLLRQAMNEGKVDAQKHNGLWLDVGTVERLNEATQIVQNW >gi|257257231|gb|ACDX02000013.1| GENE 17 21949 - 22986 701 345 aa, chain + ## HITS:1 COG:RSc1436 KEGG:ns NR:ns ## COG: RSc1436 COG2801 # Protein_GI_number: 17546155 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Ralstonia solanacearum # 76 340 1 274 278 213 48.0 3e-55 MDTRLSRRRHRRTRTSPIQNHDRPPQKPLHRRQTRPRKNTGRAYRRVVLYARKGCLPKGV KSPQPKADRKGQSQTVQTLRAQHPLKYLLHIANLPKSSFYYHHQDRPDPDAADKALIAEI YERHKGRYGQRRIAAALDWNRKKVARLMKQMELKALIRAKKAYRHPAMGEISEHLLKRRF EARKPNEKWLTDVTELKGKDGKLYLSPILDLFNREIIAYAMSRNANSEMVKEMLEKAAPR LTDKGTMLHSDQGVLYRTAGYRELLAQHSMVQSMSRKANCWDNAPMESFFAVLKTECFYR AGELTVDELMKQIDDYMDYYNRERCSLKLKKLSPVAYRTQLAQSA >gi|257257231|gb|ACDX02000013.1| GENE 18 23169 - 25010 1845 613 aa, chain - ## HITS:1 COG:NMA0800 KEGG:ns NR:ns ## COG: NMA0800 COG3307 # Protein_GI_number: 15793774 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipid A core - O-antigen ligase and related enzymes # Organism: Neisseria meningitidis Z2491 # 18 606 16 603 604 588 50.0 1e-167 MFARTAYHIKNEWNVRLLPLWICFIWVCAVPFLSIYRVGPLPSFYLEAGSLLGATILVLV SAYKGLLNIRLPYVSVGLLLMAAYWAIQPRTMGLLYPGMSDLAAWTFVILALSAWACRGW ISAYGQDRVVTVFAWSLFFGAAAQAVVAFMQFKGWSDISLFHGILAYGGGTVNGQLGQRN HLGHYLMWGVLAASYLWATRKMPDWLGLVCVFLLTAVLGLVNSRTILGYIIAIVLILPFW YWRAGRESARLIKIFFFAAVLAAVFQFGMGTLLDLLGNSRYETAIERAGHSDFEGSARQI EWRNAWTAFTRSPIFGHGWNSFGSLSFLLNAEKQYFANNILGVLFTHCHNLILQILAEMG LTGALLSAGTMLAGVWRLITRPSNPANLFLLTAASVTMCHSMLEYPLWYIYFLTPFALML SLSSARYEDVSDGIKQARRRNLTGGIAALAIIGGTLHLGWNYTDLTAYSRQPKTDDPSQV NAKISGLRRISETSPMLAYYADLSLTRRADPSDEKVQPWAQKAAFDALTYRPYSNAYQVG LYLYRQGKTKEGAQWMQDMYYYYPYTMPFYTGKIRSRKEFEPLLPQILEDCRNFLKSPKH KTAKPCAAEIPTS >gi|257257231|gb|ACDX02000013.1| GENE 19 25010 - 25369 180 119 aa, chain - ## HITS:1 COG:NMB0597 KEGG:ns NR:ns ## COG: NMB0597 COG3308 # Protein_GI_number: 15676502 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis MC58 # 11 116 7 112 117 147 79.0 5e-36 MNTSSKSSLPYLASCASLIFLILLSLSWELWIAPLRNGGSWLALKALPLCLPLSGILKGR IYTYQYSSMLILIYFAEAVMRLFDASPAERLCAALSLISCIIFFIACLAFIKQHKKEGK >gi|257257231|gb|ACDX02000013.1| GENE 20 25505 - 26155 988 216 aa, chain - ## HITS:1 COG:VCA0637 KEGG:ns NR:ns ## COG: VCA0637 COG0778 # Protein_GI_number: 15601395 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Vibrio cholerae # 1 216 1 217 217 229 52.0 2e-60 MNITEIVRQRYSTKSFDPSKKIAAEDFAHIEAALRNSPSSVNMQPWHFIIADDEAGKARI AKATEKLPYNAPKITHASHVVVFAARVCADDDYVAAVLAQEDKDGRFATEEAKQAGDSTR CLFLGIHRNQIQDEEQWLAKQVYLNMGFTLLAAVASDIDAVPMEGVDLQVLNEEFGLTEK GYKAVAVVSFGYRAADDFNAALPKSRFENEVIFTKI >gi|257257231|gb|ACDX02000013.1| GENE 21 26516 - 27016 468 166 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|288576068|ref|ZP_05978125.2| ## NR: gi|288576068|ref|ZP_05978125.2| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 166 15 180 180 331 100.0 1e-89 MKPIAAALSLSAFILTACTADSPRMSVGLGLGTGIGNHIGLGTSVNIPVGIGIGKRENLP PKNNGGIHIIEEQIVTYFDAQGNPADSPVKGGYYRQLISRHNHEYLVQDFYSDNSRKRTD PYPLPRERLLQFRATPYDGSLTVYAYNGNVMRQQVFKNGKLISTKY >gi|257257231|gb|ACDX02000013.1| GENE 22 27116 - 27589 718 157 aa, chain - ## HITS:1 COG:NMB1365 KEGG:ns NR:ns ## COG: NMB1365 COG2846 # Protein_GI_number: 15677230 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Regulator of cell morphogenesis and NO signaling # Organism: Neisseria meningitidis MC58 # 1 157 1 157 157 198 64.0 3e-51 MTDLTVWEVSPVNTVIDHVISRYHNTHRAQLEELVPLAHKIASTSPDGFPAELPELLEYI QNELLMHMMKEERMLFPMAKQSLGSRAAMPVNVMMHEHEEHDRALAQLKTLTNHFTPPQN ADKDQQRLYALAQELSDDLEEHIHLENEILFPRILAS >gi|257257231|gb|ACDX02000013.1| GENE 23 27824 - 28660 858 278 aa, chain + ## HITS:1 COG:NMA1100 KEGG:ns NR:ns ## COG: NMA1100 COG0555 # Protein_GI_number: 15794048 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type sulfate transport system, permease component # Organism: Neisseria meningitidis Z2491 # 1 278 1 278 278 429 96.0 1e-120 MLLLKTPSVLPGFKISLGLTVLCLSLLVVLPFAMMAAKAAEIGWSGFWNTIAEPNVLAAV WLSLRMSFYAMLTNVVFGTLVAWVLVRYEFPLKGLVNALVDLPFALPTAVTGIALATLYA PNGWIGRFFEPLGIKIAFTPVGIWIALVVVSLPFIVRAVQPVLEELSGEYEEAAATLGAN RFTTFRRVLLPEITPALLTGAGMMFARATGEYGSVIFIAGNIPMVSEILPLIITGKLEQF DVQGASAVALFMLLVSFVILFALNVMQWALSRRSVAKG >gi|257257231|gb|ACDX02000013.1| GENE 24 28842 - 29702 1354 286 aa, chain + ## HITS:1 COG:NMA1098 KEGG:ns NR:ns ## COG: NMA1098 COG4208 # Protein_GI_number: 15794046 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type sulfate transport system, permease component # Organism: Neisseria meningitidis Z2491 # 1 285 1 285 286 449 96.0 1e-126 MKPYSANPNLTEPRWLRVLLTAVALGFLLLMLVVPLVAVFYEALKGGWDLYLQSLTDPEA WAAIKLTLITAAVVVPVNAVLGVAMAWLLTRFDFRGKQLLTTLLDLPFSVSPVVAGLMFV LLFGAHTALGGWLEAQGIQIIFAIPGIILATLFVTFPFVAREIIPLMQAQGDSEEQAALI LGASGWQMFWRVTLPNIKWALLYGIILTNARAMGEFGAVSVVSGHIRGETNTIPLLVEIF YNEYNFTGAFALSGVLALLALATLAVQNIITKLQDKKLAAAERNAA >gi|257257231|gb|ACDX02000013.1| GENE 25 29699 - 30772 1774 357 aa, chain + ## HITS:1 COG:NMB0879 KEGG:ns NR:ns ## COG: NMB0879 COG1118 # Protein_GI_number: 15676775 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type sulfate/molybdate transport systems, ATPase component # Organism: Neisseria meningitidis MC58 # 1 357 1 357 357 690 96.0 0 MSITIQNLNKHFGNFHALKNINLNVPTGKLVSLLGPSGCGKTTLLRIIAGLENADGGNIL FDGQDVTAKHVRERKVGFVFQHYALFRHMNVFDNVAFGLTVLPKSERPSKEQIRAKVEEL LKLVQLSHLAKSYPHQLSGGQRQRIALARALAVEPKLLLLDEPFGALDAKVRKELRTWLR DIHHNLGVTSILVTHDQEEALEVSDEIVVMNHGKIEQTGSAEAIYRKPENAFVTEFLGET DAFEGRIEKGIWHYNGFAWKLDAHYKWQEQTATGYIRPHEWQIAAEHETPMIRAEIEKIH AVGALTHVLVKHGKQDVHITLAGSDASRLDLAAGRELALVPKQVYVFSQNELIEYSI >gi|257257231|gb|ACDX02000013.1| GENE 26 30921 - 31982 1683 353 aa, chain - ## HITS:1 COG:alr0150 KEGG:ns NR:ns ## COG: alr0150 COG3541 # Protein_GI_number: 17227646 # Func_class: R General function prediction only # Function: Predicted nucleotidyltransferase # Organism: Nostoc sp. PCC 7120 # 9 332 6 341 362 117 29.0 4e-26 MLTIEDLHIQNLLLLEAVSGSRAYGLATPESDTDIKGVFYLPKSMFYGMEYIPQISNETN DIVYYELGRFIELLLQSNPNTLELLASPPDCVRYRSPLMDAFKTEWFVSKACRQSFAGYA YGQIKKARGLNKKISNPMSSEKKSVLDFCHIVEGAQTAPLQRWLAQREMEQRRVGLVKIA HARELYALFYDLNGTRGYHGVAPKPEATNLSLSSVPEGETPLAYLSFNQDGYSSYCREYA SYQQWLAERNETRYQGTQAHGQGYDAKNMMHTFRLLGTARDIARHGEIRPRRPNRDELLA IKRGESSYEELLEKAERLMAEVETAFEASDLPETVNATSALAALVEVRETLYG >gi|257257231|gb|ACDX02000013.1| GENE 27 32017 - 32703 781 228 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261365248|ref|ZP_05978131.1| ## NR: gi|261365248|ref|ZP_05978131.1| hypothetical protein NEIMUCOT_05632 [Neisseria mucosa ATCC 25996] hypothetical protein NEIMUCOT_05632 [Neisseria mucosa ATCC 25996] # 1 228 1 228 228 450 100.0 1e-125 MPHTNAAQSPEYRAIQQATQPLFSPQNRTEQRVLTFPTQHTLHIDSYAGEAGGRNLSGSL CRLYDSAGDTVTQWQSLDDSAAFYQYIAHSNGRNYLLFRQDLYGYSVLDFTMGEIMQYLP RAALDGTETFIWTEVHYNPANDMLAVGGCYWAAPYSLQLADFSNPMSVPPRMTDALYEYI PNFWDDYDGEIDFYAWHGTDLLYIAPLLEEKNAAPKILTQAQYLAWLE >gi|257257231|gb|ACDX02000013.1| GENE 28 32868 - 33626 1006 252 aa, chain - ## HITS:1 COG:RSc0225 KEGG:ns NR:ns ## COG: RSc0225 COG3541 # Protein_GI_number: 17544944 # Func_class: R General function prediction only # Function: Predicted nucleotidyltransferase # Organism: Ralstonia solanacearum # 1 203 25 229 281 163 42.0 3e-40 MKQTIQEKLTHIAHTEPLHFLLAVESGSRAWGFASPDSDYDVRAIYIRPQQYYLQIDEAK DTFEFIENQWFDVGGWDIRKALRLLRKSNATLLEWLRSPIVYTQDDTFIGRLNALAPQYV QAAALLHHYRGIAGNALRNMDLAHPVKLKKWFYVLRPLLAARWAVKQGGIPPMTLAELMS EWQTDCAAQIADLVAIKAEQDESYLHTLSPELQRLTVDLYNEVSELSAPAAQAADSVPLN ELFRETLAVVYP >gi|257257231|gb|ACDX02000013.1| GENE 29 33716 - 35008 2017 430 aa, chain - ## HITS:1 COG:NMB1581 KEGG:ns NR:ns ## COG: NMB1581 COG0141 # Protein_GI_number: 15677431 # Func_class: E Amino acid transport and metabolism # Function: Histidinol dehydrogenase # Organism: Neisseria meningitidis MC58 # 1 429 1 429 429 771 93.0 0 MKKLNTQSPDFQAELKALLAFETAQNPEIDRIVADICADVQKRGDAALIEYTNRFDGTSA QTIADLILTQDDLQAAFERLQPEIQTALKTAAARVESYHQRQKMESWTYEDEDGTLLGQQ ITPLDRVGIYVPGGKAAYPSSVIMNAMPAHVAGVKEIIMVVPTPKGERNDIVLAAAFVAG VTKVFTVGGAQAVAALAYGTESVPQVDKITGPGNAFVAAAKRRVFGVVGIDMVAGPSEIL VIADGTTPADWVAMDLFSQAEHDEIAQAILIGTSQPYLDEVQAAMNRLIETMPRRDIIEA SLGNRGAMILAKDLDEACEIANYISPEHLELSVENPQEWAKKIRHAGAIFMGRYTSESLG DYCAGPNHVLPTSRTARFSSPLGTYDFQKRSSLIQVSEQGAQKLGKIASVLAHGESLTAH ARAAEFRLKD >gi|257257231|gb|ACDX02000013.1| GENE 30 35005 - 35901 1029 298 aa, chain - ## HITS:1 COG:NMA1769 KEGG:ns NR:ns ## COG: NMA1769 COG3680 # Protein_GI_number: 15794662 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 298 1 299 299 471 81.0 1e-133 MVAKIKKFSDSTLSVLNNGERRFYVYCLTDLKKDKILYIGKGCDNRIFEHEQAARSQDGD FGDIDVPERKAIAKCKKLGRHIISYHLTETEAQAAETALIHFVKSVVDKKFKNKSAGCGA GGISAEELDERFKFTPCPLDEFNPDGLVLAVKIQDALDLDTDEEADYSFDNQDDANLKSR TLGNWIVGKDAASKVKYVIGIHADLQNAVVSAYEVDGFETMAEESKNGRTQTRYRFRTAS SSKKVLSKLGLQQKCLPELKFGSGGEKAYIRPKTETETEQENIQTTPSPKIKKEKTKS >gi|257257231|gb|ACDX02000013.1| GENE 31 36005 - 36658 1008 217 aa, chain - ## HITS:1 COG:NMA1768 KEGG:ns NR:ns ## COG: NMA1768 COG0040 # Protein_GI_number: 15794661 # Func_class: E Amino acid transport and metabolism # Function: ATP phosphoribosyltransferase # Organism: Neisseria meningitidis Z2491 # 1 216 1 216 217 375 91.0 1e-104 MTENTLTIALSKGRIFEETLPLLAAAGIVPAEAPEKSRKLIIGTNHENIRLVIVRATDVP TYVQYGAADFGIAGKDVLIEHGGSGLYQPLDLHIAECRMMVAVRKGFDYAAASQPGSRLR IATKYPNIAAEHFAGKGVHVDIIKLYGSMELAPLVGLSNAIVDLVSTGNTLKANGLEAVE HVVDISSRLVVNKAALKTKHALLEPIIQAFGSAVKAG >gi|257257231|gb|ACDX02000013.1| GENE 32 36940 - 37653 991 237 aa, chain - ## HITS:1 COG:NMA1767 KEGG:ns NR:ns ## COG: NMA1767 COG1999 # Protein_GI_number: 15794660 # Func_class: R General function prediction only # Function: Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems # Organism: Neisseria meningitidis Z2491 # 2 237 1 217 217 309 72.0 2e-84 MMPTAIRTAILGAFALTALAACKPEAKAPEQNPAPASAASSTASAPAATPASSPETTSLN AAAAPKPQGPGTDMRKEDIGGDFTLTDGDGKPFSLSDLKGKVVILSFGYTHCPDVCPTEL LTYSDTLKQLGDQAKDVKVVFVSIDPERDTPEVIGKYVKQFNPEFIGLTPTGDQSLPIIK QQYRVVSAKVVQKEDSENYLVDHSSGAYLIDKNGEVAIFSPYGSEPATIAADIKKLL >gi|257257231|gb|ACDX02000013.1| GENE 33 38226 - 38405 97 59 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261365254|ref|ZP_05978137.1| ## NR: gi|261365254|ref|ZP_05978137.1| prophage PSPPH01, site-specific recombinase, phage integrase family [Neisseria mucosa ATCC 25996] prophage PSPPH01, site-specific recombinase, phage integrase family [Neisseria mucosa ATCC 25996] # 1 59 1 59 59 111 100.0 1e-23 MKLNDRQIKNAKPAEKPFKLNDGKGLYLYINTSGGKLWRFGFTQMWKSTALFTVFPGEY >gi|257257231|gb|ACDX02000013.1| GENE 34 38409 - 39014 611 201 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261365255|ref|ZP_05978138.1| ## NR: gi|261365255|ref|ZP_05978138.1| transposase [Neisseria mucosa ATCC 25996] transposase [Neisseria mucosa ATCC 25996] # 1 201 1 201 201 364 100.0 2e-99 MNMHKNTRLTPHHRQAIWLAYTQEKESITSLARRHQVSRVTIYRALKAARGRLLKPQTST NNRFKQAKYGMKRLAKVERSIQEKLKKQAKRYNKSYPGELVHLDTKRLPLLKGQKATDKR DYLFVAIDDFSRELYAAILPDKTADSAVKFLTEHLIDPCPYLIECVYSDNGTEYIVKQNK KYPTKPAQKTNSRTSLFSGAV >gi|257257231|gb|ACDX02000013.1| GENE 35 38935 - 39396 273 153 aa, chain - ## HITS:1 COG:SP0016 KEGG:ns NR:ns ## COG: SP0016 COG3335 # Protein_GI_number: 15899965 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 42 152 1 111 112 140 57.0 1e-33 MPKVYLDETGFDTFYYRPYAYALRGQIVKARISGKRYERMSLVAACGDRELVAPMIYKGT MDSSLFEAWFGQFLLKELKEPSVIIMDNARFHRMAVLREMAQRAGHIILPLPPYSPELNP IEKVWANIKRHLRKVMSGCLSFEQALLGIFCFV >gi|257257231|gb|ACDX02000013.1| GENE 36 39432 - 39782 294 116 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148984739|ref|ZP_01818007.1| IS630-Spn1, transposase Orf1 [Streptococcus pneumoniae SP3-BS71] # 1 116 1 116 116 117 44 1e-25 MAYSIDFRQKALDHYEQHGNISQTARTFRITNRTLYQWIALKKETGSLQHRTKGGNSERI DKEELRRYVAEHPDAYQYEIAQHLGCTASNVGYLLKTLKITRKKRQPSTKNKTSKK >gi|257257231|gb|ACDX02000013.1| GENE 37 39846 - 40148 404 100 aa, chain - ## HITS:1 COG:FN0417 KEGG:ns NR:ns ## COG: FN0417 COG3587 # Protein_GI_number: 19703759 # Func_class: V Defense mechanisms # Function: Restriction endonuclease # Organism: Fusobacterium nucleatum # 1 100 1 112 997 84 44.0 4e-17 MELKFEELPYQLDAVNAVANLFAGQPNHARTFDLTSQGTGRFVGNGLDLDWETLGRNLNM VQKQNGQLETEIGAHGLNFSLEMETGTGKTYVYLRTIYEL >gi|257257231|gb|ACDX02000013.1| GENE 38 40159 - 42126 1147 655 aa, chain - ## HITS:1 COG:PM0698 KEGG:ns NR:ns ## COG: PM0698 COG2189 # Protein_GI_number: 15602563 # Func_class: L Replication, recombination and repair # Function: Adenine specific DNA methylase Mod # Organism: Pasteurella multocida # 41 640 10 619 636 349 37.0 8e-96 MATEPNRTEPNRTEPNRTEPNRTEPNRTEPNRTEIIHDLENNFKQNNILKLKQLFPEVFC EDQIDFEKLKLVLGAENLAGAGERYQLDWAGKTAAYLNLQSPTSRTLVPCKEESADFDGT QNVFIEAENLEALKILQKSYAGSVKMIYIDPPYNTGSDSFIYPDKFSESREEYARRVGDT DDAGYLKRDGVFQGAWRKNGKDSGHYHSNWLSMMLPRLHLAKTLLREDGVIFISIDDNEQ AQLKLLCDEVFGAENFLANLIWQKKYAATNDAKGFSTLHDYIIVYQKGSEFERNLLPRTE AQNKPYKNDDGDGKGLWRSDNLLVKSFSASAVYPIRNPNTGEEFFPPQGSSWRASQSTME IWLKENRIFFGKDGLGAPQLKRYLNEVQQGRVPTTWWNFEEVGHNDGANKELQSLFNSKA PFDTPKPTTLLLQMLKIGSNPNDLILDFFSGSGTTAHAVMQLNAEDGGSRRFICVQLPEE TDEKSEARKAGFNTIAEIAKERIRRAGRQISDGLQDGSETDTGFKVFKLAESGFKQWRQP EQADTEALQRELSLNIDSVLSETSSENLLYELMLRMGLKLTCKVSFSDDVYFVEDEDTGG LYAFLLERVDQGLIDAVLEKHPVKVVVLDRLFNDDALKSNTVLQMKDAGVMFECV >gi|257257231|gb|ACDX02000013.1| GENE 39 42252 - 44621 2776 789 aa, chain - ## HITS:1 COG:NMB0274 KEGG:ns NR:ns ## COG: NMB0274 COG0514 # Protein_GI_number: 15676198 # Func_class: L Replication, recombination and repair # Function: Superfamily II DNA helicase # Organism: Neisseria meningitidis MC58 # 20 785 1 760 766 1208 78.0 0 MQAVSKTAKITLFPPYGTIMPQPSAQQILHEVFGYPEFRGKQEAVVNTLAGGGSLMVLMP TGGGKSLCYQIPALMREGVAIVVSPLIALMNDQVASLHAAGIEAAAVNSSTTVEEAREVA DKLAQGRLKLLYVAPERLVTDRFLRFLDQQTISLFAIDEAHCVSQWGHDFRPEYQQLGLL AERYPQVPRIALTATADAATRADIKHFLHLEDAPEFISSFDRPNIYYQVIEKNNGKKQLL DFIRKEMEGQSGIVYCLSRKKVEDIAQFLCENGLDAIPYHAGLSMEVREANQRRFTREDN IIVVATVAFGMGIDKPDVRFVAHLDMPQSVEHFYQESGRAGRDGLPAVSWLCYGLNDWVL LRERIAEGNSDEVQKQIEMQKLDAMLSVCETAACRRVLLLKHFGEESAPCGHCDNCLHPP VRFDGTVLVQKLLSCVYRAGQRFAAGYITNLLRGKSDDWIQRNGHDKLSTFGIGSGQTDK EWRSVIRQCISLGYLTVNTAQYQALQLTEAAKKVLKGETEVMLRPLRREKAAAQKPKDNW LRTEREERLWQALRRWRQQRAHAEEVPAYVVCGDKTLRDIVEKMPQTLEDLHQIYGLGEA KINKFGIDILNVCENAAEKQSEQTGNEESLFTPQTEREQQLQQKLETWRAEQAAAEQCAL GKILSNISLTDLVVFTPAEEVDLLGIYGIGSERIAQHGQAILDICRPYANGLSEPKQVER QLARRLFQWCLDTARYEGGEMHAVARKQTLRAIAKARPQNLTALSKIDDVSGEWLDKYGE EIVEICTAD >gi|257257231|gb|ACDX02000013.1| GENE 40 44957 - 45403 505 148 aa, chain + ## HITS:1 COG:no KEGG:NLA_20400 NR:ns ## KEGG: NLA_20400 # Name: not_defined # Def: lipoprotein # Organism: N.lactamica # Pathway: not_defined # 16 148 19 146 146 158 58.0 7e-38 MNIKHFSLISTLSAALLLSACQTTTTTSGGVSGNWDNIGTISEGNIKVAIDKNSIKKNGT LVTFRDRKTVSKMKEERFVNTPAYKTAIGDWEIHCTNKTYRLTALQLLDEHGKEISKHSY TATNIRPMSVMNGTITEKQFEAVCGSKL >gi|257257231|gb|ACDX02000013.1| GENE 41 45595 - 46164 126 189 aa, chain - ## HITS:1 COG:NMA0237 KEGG:ns NR:ns ## COG: NMA0237 COG0009 # Protein_GI_number: 15793255 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation factor (SUA5) # Organism: Neisseria meningitidis Z2491 # 1 189 12 200 200 294 80.0 8e-80 MLFPRILSASTLCKLQSHLKKGGLVAYPTESCYGIGCIPTLPKALNRLIHLKKRPQHKGM IVIGNQLEQLQPLLKRSSENIQTMLRNEWPAPKTFLLPAAADVLPALRGKGRSKLAVRVP AHAGARRLCQALKTPLVSTSCNRAGKRACRTEREVRRQFGRNIWVVSGLIGKQKSPSQII DGETGVRLR >gi|257257231|gb|ACDX02000013.1| GENE 42 46220 - 47554 1371 444 aa, chain - ## HITS:1 COG:NMB2151 KEGG:ns NR:ns ## COG: NMB2151 COG0151 # Protein_GI_number: 15677964 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylamine-glycine ligase # Organism: Neisseria meningitidis MC58 # 22 444 1 423 423 800 97.0 0 MGQKSLYVEFSLKVHICQGDGMKLLVIGNGGREHALAWKLAQSPKVETVFVAPGNAGTAI EPKLQNIALTAHQDLIEFCRKENIAFTVVGPEAPLAAGIVDDFRAAGLKIFGPTQYAAQL ESSKDFAKAFMAKYNIPTAQYQTFENADAAHDYVNQKGAPIVIKADGLAAGKGVIVAMTL DEAHAAIDDMLLGNKMGNAGARVVIEDFLQGEEASFIVMVDGNHVLPMATSQDHKRLLDD DKGPNTGGMGAYSPAPVVTPAVYERAMNEIILPTVAGMKAEGHEFTGFLYAGLMIDQSGA PYTIEFNCRFGDPETQPIMSRLNSDLSDLVEAAIDGKLDSVTAEWNPQTAVGVVLAAQNY PETPKKGDVISGLDAANQIGKVFHAGTTANEKGDVLTNGGRVLCVVGLGDDVAQAKAKAY GALEKISFDGMQYRKDIADKAINR >gi|257257231|gb|ACDX02000013.1| GENE 43 47651 - 47968 349 105 aa, chain + ## HITS:1 COG:no KEGG:NMO_0026 NR:ns ## KEGG: NMO_0026 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 1 105 1 105 105 183 99.0 2e-45 MQKRIDEIQSKYREWCHLLPQLEEDIRRWKHAVALIRDMDNFYTHEYQACHRAIEDGAEV DLRTEGEYSIMSEDALWNALGEFHQLAWLYLRSSVDALDRYTQED >gi|257257231|gb|ACDX02000013.1| GENE 44 48022 - 48633 319 203 aa, chain - ## HITS:1 COG:NMA0240 KEGG:ns NR:ns ## COG: NMA0240 COG1739 # Protein_GI_number: 15793258 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 1 203 1 203 203 413 97.0 1e-115 MITTYKTITSPTQAEFKDKGSRFIAFAYPIRTLADVKKYLDPLKEEHHKARHWCYAYRLG VDGMQFRANDDGEPSGSAGRPILGQIDSVGVTDVLVVVVRYFGGTLLGVPGLIHAYKEAT AQALAVAEVVEKNIEKTVWLKCEYPFLNEAIRIAKQYQADILEQDLQLDCRLTVSLSLAN YEVCVAAWKNTRQIEVNTEKPFE >gi|257257231|gb|ACDX02000013.1| GENE 45 48696 - 49631 869 311 aa, chain - ## HITS:1 COG:NMB2154 KEGG:ns NR:ns ## COG: NMB2154 COG2025 # Protein_GI_number: 15677967 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, alpha subunit # Organism: Neisseria meningitidis MC58 # 1 311 1 311 311 511 96.0 1e-145 MSVLIIAEHDNKQLNPATLHAVTAAAKLGKVDLLVAGNGASAVVESAKQVAGVDKVLVAD AAHYAEGLAEELAPLVVKLVADYRYVAATATTFGKNLLPRVAALLDVPQISDLTEIVDNT TFVRPIYAGNAFETVQADSEKLVLTFRATAFDAAAAQGGNAEVVNVETTPAQNLSRFVNR QLSHSDRPELTQAKVIVSGGRALGSAEKFNEVLTPLADILGAAIGASRAAVDAEYAPNDV QVGQTGKVVAPQLYFAIGISGAIQHVAGMQDSKVIVAINKDADAPIFNVADYGLVGDLFE IVPQLTEALKN >gi|257257231|gb|ACDX02000013.1| GENE 46 49642 - 50391 950 249 aa, chain - ## HITS:1 COG:NMB2155 KEGG:ns NR:ns ## COG: NMB2155 COG2086 # Protein_GI_number: 15677968 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, beta subunit # Organism: Neisseria meningitidis MC58 # 1 249 1 249 249 384 98.0 1e-107 MKALVAVKRVVDYNVKVRVKADGSDVDIGNVKMSMNPFDEIAVEEAVRLKEAGKVSEIVA VSLGEKKCEETLRTALAMGADRAIHVETDAKLEPLAVAKLLKAVADKENPQIFFLGKQAI DDDANQVAQMLAALLNAAQGTFASKVQIEGDEVQIVREIDGGEETIALKLPAVISADLRL NEPRFVKLPNIMAAKKKPLEKLAPADLVADISPRLKTVKFAEPKARQAGVKVASVAELVE KLKNEAKVI >gi|257257231|gb|ACDX02000013.1| GENE 47 50617 - 51585 639 322 aa, chain - ## HITS:1 COG:NMA0243 KEGG:ns NR:ns ## COG: NMA0243 COG0859 # Protein_GI_number: 15793261 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Neisseria meningitidis Z2491 # 1 322 1 322 322 631 94.0 0 MKILLVRLSSMGDLIHTLPAIEDLARQCPDVELHWLCEAGFADIARLHPFVKKIHVMKWR QWRKHLFQSEAWQEIGRLKQTLRQEAFDFVLDSQGLIKSACFAKMAKSPIYGLDKNSARE GLAALAYAKKYAVPKGKNAVWRNRELFAQVFEYAMPETQVFGLTVPEAGRLKNLEQPYYA ALHATSRDSKLWPVENWRVLLQKLNEEQQCNVYLPWGNEAEKARAEQIADELPFAIVCDK ISLLQAAYLLKHAVGIVGVDTGLLHLANALEKPVVGIYTDTDPIKTGVQVSPIAKNLGNI GQIPSADLVYQTLMDCVVADKG >gi|257257231|gb|ACDX02000013.1| GENE 48 51622 - 52257 399 211 aa, chain - ## HITS:1 COG:NMB2157 KEGG:ns NR:ns ## COG: NMB2157 COG1335 # Protein_GI_number: 15677970 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Neisseria meningitidis MC58 # 1 211 1 211 211 413 94.0 1e-115 MIVSIDVDAQKTFTPLCPDELPVNEGHLIVEELNAQAALADLRVMTKDAHHAAAKWLVDN PVDMLKPTGLPDADLTWVAHAMVGTRGYELLDGLPAAKEYDYCVWKGVDPELHPYGACFH DIEEKLSTGLIEWLRCQNTDTVIVGGLATDYCVKTTVLQLIKGGSWQVIVNEAACRGIAP DTIETAWQEMSSAGAIILKNAEEIKKHINNQ >gi|257257231|gb|ACDX02000013.1| GENE 49 52372 - 53046 803 224 aa, chain + ## HITS:1 COG:NMA0245 KEGG:ns NR:ns ## COG: NMA0245 COG1720 # Protein_GI_number: 15793263 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 1 222 1 222 226 418 91.0 1e-117 MTYTIIPIATARSPYKQKFGVARQPGLVPAAEVCIELNPEFTADSVRGLEHFDYVWISFI FHGVLDEGWAQMVRPPRLGGKQKMGVFATRSPHRPNHLGLSLLKLDRIETGKSVRLYCSG ADLLDGTPIVDIKPYIPFVESKPTASSGFVNGKPEELEVVWLENIGVENLSESTKNLISQ SIAQDPRPAYQNIPERIYVMNIEDYEVRFQIEENRATVIGISVV >gi|257257231|gb|ACDX02000013.1| GENE 50 53559 - 54563 1570 334 aa, chain - ## HITS:1 COG:NMA0246 KEGG:ns NR:ns ## COG: NMA0246 COG0057 # Protein_GI_number: 15793264 # Func_class: G Carbohydrate transport and metabolism # Function: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase # Organism: Neisseria meningitidis Z2491 # 1 334 1 334 334 633 96.0 0 MSIKVAINGFGRIGRLALRQIEKAEGIEVVAVNDLTPAEMLLHLFKYDSTQGRFQGTAEL KDDAIVVNGKEIKVFSNPNPEELPWGDLGVDVVLECTGFFTSKTKAEAHIRAGARKVVIS APGGNDVKTVVYGVNQDILDGSETVISAASCTTNCLAPMAAVLQKEFGVVEGLMTTIHAY TGDQNTLDAPHRKGDLRRARAAALNIVPNSTGAAKAIGLVIPELNGKLDGSAQRVPVATG SLTELVSILERPVTKEEINAAMKAAASDTLGYTEDQIVSSDVIGIEYGSLFDATQTRVMT VGDKQLVKTVAWYDNEMSYTCQLVRTLEYFAGKI >gi|257257231|gb|ACDX02000013.1| GENE 51 55130 - 56044 1234 304 aa, chain + ## HITS:1 COG:NMA0263 KEGG:ns NR:ns ## COG: NMA0263 COG0774 # Protein_GI_number: 15793281 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-3-O-acyl-N-acetylglucosamine deacetylase # Organism: Neisseria meningitidis Z2491 # 1 301 1 301 307 565 97.0 1e-161 MLQRTLAKSISVTGVGLHSGERVALTLHPAPENSGISFRRTDLDGEMGETIKLTPYLIND TRLSSTIVTDKGVRVGTIEHIMSALSAYGIDNALIELNAPEIPIMDGSSLPFIYLLQDAG VVDQKAQKRFLKILKPVEVKEAGKWVRFTPYEGFKVTLTIEFDHPVFNRSSPTFEIDFAG KSYIDEIARARTFGFMHEVEMMRAHNLGLGGNLNNAIVIDDMDVLNPEGLRYPDEFVRHK ILDAIGDLYIVGHPIIGAFEGYKSGHAINNALLRAVLADETAYEWVEFADDEDLPSAFHE LPAA >gi|257257231|gb|ACDX02000013.1| GENE 52 56373 - 58142 1828 589 aa, chain - ## HITS:1 COG:NMB1057 KEGG:ns NR:ns ## COG: NMB1057 COG0405 # Protein_GI_number: 15676942 # Func_class: E Amino acid transport and metabolism # Function: Gamma-glutamyltransferase # Organism: Neisseria meningitidis MC58 # 29 589 48 606 606 714 64.0 0 MKFSFGLNLLAVLVLAACAHQPMQKPDAAPVPTAVDNHAPEQGTGLIEQKLIRAKHYMAA SANPLATEAGYEVLKRGGSAIDAMIAMQTTLGLTEPQSSGLGGGAFLVYWDNKTKKLTTF DARETAPKAATPELFLDENGKPIGFMNAVVGGRSVGVPGIPKLLEDVHKRYGKLPWASLF DKPITLAEQGFTVSPRMAKSIEQNLEPLKRYPQTAAYFLPDGKPLAAGTVLKNPEFARSV RLLAEKGSAPFYQGAQAQNIVRAVTGAVDNPGKISLSDLKNYRVIERQPVCAPYREYEVC GMGAPSSGAIALGEILGVLQNQDMKALGSENIHSWRWIGDASRIAFADRDYYIGDPAFVN VPTRALISQAYLKPRAEEIRQADKALENIQAGKFGKKYAQGMAVELPSTSHLVVVDKDGN VVSMTTSIENAFGSGLMANGYLLNNELTDFAFNPVGADGKTVANSVAGGKRPRSSMAPTI VMKDGKPYLAVGSPGGSRIIGFVAKTLVAHIDWGMDIQAAISLPNMLNRGSQYEIEEKTA AADKAADLEKLGYKVQVRDLNSGVQGIVIGKDGLLGGADPRREGKVMGD >gi|257257231|gb|ACDX02000013.1| GENE 53 58626 - 60074 2300 482 aa, chain + ## HITS:1 COG:NMB0015 KEGG:ns NR:ns ## COG: NMB0015 COG0362 # Protein_GI_number: 15675963 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconate dehydrogenase # Organism: Neisseria meningitidis MC58 # 1 482 1 482 482 924 91.0 0 MKGDIGVIGLAVMGQNLILNMNDRGFKVVAYNRTTAKVDDFLNGAAKGTNIIGAYSLQDL VDKLEKPRKIMMMVRAGSVVDDFIEQLVPLLEQGDIIIDGGNANYPDSTRRTHELAAKGI RFIGAGVSGGEEGARHGPSIMPGGDEAAWPAVKPIFQAIAAKTPQGEPCCDWVGRDGAGH FVKMVHNGIEYGDMQLICEAYQFMKDGLGLSYDEMHRIFSEWNQTELDSYLIEITAAILG YKDENGEPLVEKILDTAGQKGTGKWTGINALDLGIPLTLISEAVFARCVSAFKDQRVQTG SLFGKTVTPVEGDKAAWVEALRQALLASKIISYAQGFMLIREASENNDWALNYGNTALLW REGCIIRSAFLGNIRDAYEANPDLVFLGSDPYFKGVLENCLPAWRKVVAKAIECGIPMPC MASAITFLDGYTTERLPANLLQAQRDYFGAHTYERTDKPRGEFFHTNWTGKGGDTASTTY DI >gi|257257231|gb|ACDX02000013.1| GENE 54 60333 - 61283 1202 316 aa, chain - ## HITS:1 COG:NMA0274 KEGG:ns NR:ns ## COG: NMA0274 COG1052 # Protein_GI_number: 15793292 # Func_class: C Energy production and conversion; H Coenzyme transport and metabolism; R General function prediction only # Function: Lactate dehydrogenase and related dehydrogenases # Organism: Neisseria meningitidis Z2491 # 1 316 6 321 322 484 77.0 1e-137 MNPLCIAVLDRDTLADRPFDFNFPHTLNSYGSTEAHQTAERIQGADIIITNKVVISAEHI AANPQLKLIALAATGVNNVDTAAAKAAGVTVCNIRAYGNESVAEHAFMLMITLMRNLPAY QRDVAAGVWEKSPFFCHFGAPMRDLNGKTLAIFGRGNIGQTLATYAQAFKMKVVFAEHKH AETVRDGYVSFDEAVRTADALSLHCPLTPQTANMIGEAELQQMKPGAVIINCGRGGLVDE HALIAALKYGQIGGAGFDVLTQEPPRDGNPLLKARLPNLIVTPHVAWASQEAINRLFDIL VDNINRFVAGNPQNLV >gi|257257231|gb|ACDX02000013.1| GENE 55 61567 - 61785 336 72 aa, chain + ## HITS:1 COG:NMB0028 KEGG:ns NR:ns ## COG: NMB0028 COG3205 # Protein_GI_number: 15675968 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis MC58 # 1 71 1 71 72 99 71.0 1e-21 MIKTMTFAILHFATAFGVAYILIGSIGISSAVALVEPLANTVVFYFHEKAWRRYEKNKTV KQEWATPLHHCG >gi|257257231|gb|ACDX02000013.1| GENE 56 61958 - 62218 531 86 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261365277|ref|ZP_05978160.1| ## NR: gi|261365277|ref|ZP_05978160.1| L-lactate dehydrogenase [Neisseria mucosa ATCC 25996] L-lactate dehydrogenase [Neisseria mucosa ATCC 25996] # 1 86 1 86 86 160 100.0 3e-38 MKKALFASLIAVAATASFADSRIPEWNHANDSGPIPGLTKVEYHDAHDMRKDDDRVKFTA PATGVREITDIGYNDTYARSLQNGSN >gi|257257231|gb|ACDX02000013.1| GENE 57 62383 - 62712 629 109 aa, chain + ## HITS:1 COG:NMA0273 KEGG:ns NR:ns ## COG: NMA0273 COG0545 # Protein_GI_number: 15793291 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerases 1 # Organism: Neisseria meningitidis Z2491 # 1 109 1 109 109 184 92.0 4e-47 MSGLIIEDLQEGHGKEAVKGKEITVHYTGWLEDGTKFDSSLDRRQPLTITLGVGQVIQGW DEGFGGMKEGGKRKLTIPAEMGYGARGAGGVIPPNATLVFEVELLKVYE >gi|257257231|gb|ACDX02000013.1| GENE 58 62861 - 64255 2169 464 aa, chain + ## HITS:1 COG:NMA0250 KEGG:ns NR:ns ## COG: NMA0250 COG0008 # Protein_GI_number: 15793268 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Neisseria meningitidis Z2491 # 1 464 1 464 464 932 96.0 0 MTVKTRFAPSPTGYLHIGGVRTALFSWAFARHHKGEFLLRIEDTDLARSTAESVNIILDG MKWVGLDYDNADNVVYQTRRFDRYKEVIAELLEKGAAYYCYCSKEELEAMREKAEKEGTA TYDRRWRPEEGKTLPEIPADVQPVVRFKTPLDGITQWTDLVKGEISIPNEALDDLIIARA DGTPTYNFCVVVDDYDMGVTHVIRGDDHVNNTPKQINILKAIGANLPEYGHLPMILNEQG KKISKRSGDTVAITDFGAMGILPEAMLNYLARLGWAHGDDEFFTMEQFIEWFDLKDVSPS PSRMDLKKLYWINGEHIKITPNEKLAELIKPRLALRDIYDTAKPALEDVLALVKDRAQDL NTLADECLYFYVKQTPAEADVQKHWDDEAAARMLRFAERLEGLEDWNAEAIHDLFKPFCD EEGIKMGKLGMPLRLAVCGTAKTPSVDAVLALIGKEEVLKRIRS >gi|257257231|gb|ACDX02000013.1| GENE 59 64600 - 65898 2112 432 aa, chain - ## HITS:1 COG:PA0371 KEGG:ns NR:ns ## COG: PA0371 COG0612 # Protein_GI_number: 15595568 # Func_class: R General function prediction only # Function: Predicted Zn-dependent peptidases # Organism: Pseudomonas aeruginosa # 16 430 59 470 495 243 34.0 6e-64 MKYAPAFLALILPLSVQAAVNIQRWTTPQGVQVLLAERHENPIIDMAVSFRGAGNASDPD GKSETAAFTAALLTSGTKEMDEETFNAQTNGLAVEIGSGTDNETATATLRSLSRPDTLKK AVSLFNGALTRPRFDEAVFRRNQTQAATFLQQQETKPDFTAARTLARLSYPDHPYGKGAY TTVQSINSITLDDIRAFYRTRYGKNNAVVAIVGDIDRKGADRLVQDALSSLPDRAAASAD VPPVKKHPAQRRDIPFAGEQAQIMLGMPLITRNDPDYYALVAGNYVLGGGGFDSRLMEVL RNQRGDTYGVYSNLTPERQAGMFTIAYSSRKPAARASLAAAQEVIRQFIAEGPTEEEMAQ AKANITGSFPLRFDSNAKLLGYLNLIGVYNLPDDYLEAYPKAVAKLTSADVKAAWQKRVR PEDLNIVVVGAQ >gi|257257231|gb|ACDX02000013.1| GENE 60 66346 - 68202 236 618 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 364 590 279 507 563 95 28 8e-19 MIQKIFSWFESRIDPYPEAAPKTPEKGLWRFVWSNIEGLRKWIAVLAVFTAGIGIMEALL FQFMGKVVDWLGKYTPATLFDEKGWALTAMAGMMVFFALWTFLASNVRLQTLQGVFPMRL RWNFHRLMLGQSLGFYQDEFAGRVSAKVMQTALALRDVVMTVADMVVYVLVYFITSGVIL VALDGWLLLPFIGWIIGFALIMRLLIPKLGKTAARQADARSLMTGRITDAYSNITTVKLF SHGAREAAYAKQSMEEFMVTVHAQMRLATLLHTCSFIVNSSLTAGTTALGIWLWYHGQVG VGAVATATAMALRVNGLSQYIMWESARLFENIGTVGDGMVTLSKPHTILDKPNALPLKVS QGEIKFEHVDFSYEAGKPLLNGFNLTIRPGEKVGLIGRSGAGKSTIVNLLLRFYEPQSGT ISIDGQNVDSVTQESLRAQIGLVTQDTSLLHRSVRDNIVYGRPDATDAEMISAAERAEAA DFIPNLSDAKGRRGYDAHVGERGVKLSGGQRQRIAIARVMLKDAPILLLDEATSALDSEV EAAIQESLDKMMDGKTVIAIAHRLSTIAAMDRLIVLDKGRIIEEGSHTELLEKQGLYAKL WAHQSGGFLSEHVDWEHN >gi|257257231|gb|ACDX02000013.1| GENE 61 68481 - 68609 100 42 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKTVLSLTALFFLAACTSTTGTGGNSQVYGEIKTGIESSRTR >gi|257257231|gb|ACDX02000013.1| GENE 62 68677 - 69513 1117 278 aa, chain - ## HITS:1 COG:NMA0169 KEGG:ns NR:ns ## COG: NMA0169 COG0454 # Protein_GI_number: 15793196 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Neisseria meningitidis Z2491 # 1 278 1 280 280 484 86.0 1e-137 MLVCNPYEVVIHGTTSKGKIFRPSDWAERLCGILSSFTKDNRLSYSNWVRPILVENVRCV AVDKKLEEDNPQMFRFLMDFAADNDLRIIDCKELLKEQEDKAQGEPAERVLLAQAIEEKH AAENEVDQTAAADYVLREIPPEDTSTAFAALSVLRSSLTDISKFTEQINTVQRPAGYRLL GIFEEGKHNAVAVCGFREACNLASGRHIHIDDIVTLPQSRRKGYASRLLAEVRKIGAETG VTKIHLNVHVNHDRADAHRLYFKNGFEICAYHFRCDPK >gi|257257231|gb|ACDX02000013.1| GENE 63 70053 - 71564 190 503 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739394|ref|ZP_02146805.1| 50S ribosomal protein L36 [Phaeobacter gallaeciensis BS107] # 174 454 108 364 409 77 27 2e-13 MNVPLLLTAVLAFLSGALITWLLARNKAQTQQFALMQSLAECRQNLEFAEQNQAQTAAEL ADSRYHIQDLQGELQELGNRFAAAERQIGYLQERELEAGRLKQDYAELQENAHNLHVRNE RLHIQLEQERLAADEKLKLLTEARQSLGDQFQNLANTILEEKSRRFTEQNRDHLSQLLTP LNERIHGFSELVQQTYEKEARERLTLENELKRLQTLNTQLHSDAKALTDALTGTQNKTQG NWGEMILESVLEHSGLQKGREYTVQAAAVRQEEDGARRLQPDVLVNLPEGKQIVIDSKVS LTAYVRYTQAADAATAERELAAHVASIRAHIRSLSQKDYTDLEGVRTLDFVFMFIPVEPA YLLALQHDAALFQECFDKRIMPVGPSTLLATLRTVAHIWRNEQQNQNALAIAAEGGRLYD KFTGFIQTLEGVGKNIDQAQNQFQQAFKQLSQGKGNLVSRAEKLRALGVKTTKRLQRDLA ETAQESALQDTLQDKGLQEGEED >gi|257257231|gb|ACDX02000013.1| GENE 64 72904 - 73011 117 35 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKELIKLAAASLIGMSGLTAGATHIADNMRTAIKK >gi|257257231|gb|ACDX02000013.1| GENE 65 73129 - 74067 1547 312 aa, chain - ## HITS:1 COG:NMB2042 KEGG:ns NR:ns ## COG: NMB2042 COG3842 # Protein_GI_number: 15677865 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport systems, ATPase components # Organism: Neisseria meningitidis MC58 # 1 308 1 311 312 389 63.0 1e-108 MLRLTDICKRFDSKTVADRISLTVSAGETLAVLGRSGCGKSTLLKIIAGIVKPDSGEVWL DGQNITAVPPEKRNVSLMFQDYALFPHLTAQENVGFGLKMRRLPKAEIEAQTMQALRDIG LENEARRKPGSLSGGEQQRLALARALIIKPSLLLLDEAFSSLDTHLRHNLYRLTDESIRR QNIPAVLVTHSPEEAAALADHIALMYEGRILQYGTPAELFRRPANAQAARLLGLPNTNET RHIPTHAIRPDPQGTPCHILSLTPLPDSLRLTFAHPEYGELTTLLPAEHLPVGDTVPIHI DKEQIVWFEPSR >gi|257257231|gb|ACDX02000013.1| GENE 66 74193 - 75071 1113 292 aa, chain - ## HITS:1 COG:NMA0394 KEGG:ns NR:ns ## COG: NMA0394 COG0494 # Protein_GI_number: 15793402 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Neisseria meningitidis Z2491 # 7 290 6 289 291 377 63.0 1e-104 MSSHPCFSKTIDRRTHDALYDWARASYGAADDWNALYLNGLALGRLNPFWRERIKQDWQE GLSEVSDDLYLQTDNWLAMGDSLQHLAHEWKSLGLLYGWRDEKFDVCDDAGKVLFALERA AFRPFGLMSQAVHLNGLVQTDGGWHFWIGRRSPHKAVDPNKLDNLVGGGIASGETPFEAV CRESEEEAGLMPPALDTLRPAARIHSLRPVSRGIHNEILHIFDIVLPETVRPENQDGEVA GFELMNVSQLVETMLSQTMMHDAQLVTLEALKRYGALDRQHPLSLWLESLCR >gi|257257231|gb|ACDX02000013.1| GENE 67 75226 - 75822 965 198 aa, chain + ## HITS:1 COG:NMA0415 KEGG:ns NR:ns ## COG: NMA0415 COG0288 # Protein_GI_number: 15793420 # Func_class: P Inorganic ion transport and metabolism # Function: Carbonic anhydrase # Organism: Neisseria meningitidis Z2491 # 1 185 1 185 199 320 84.0 1e-87 MSELSEILAYNQNFVESGEYEKYFTDKYPGRELAILSCMDARIIELLPDALGLKNGDAKL IKNAGALVTHPWGSVMRSLLVAVFELKVKEIMVIAHYDCGMKGLNAAGFLEKVHESNIPD DRIETLRNAGINLDNWLTGFDNVEDSVRHTVEVIRKHPLMPADIAVHGLVIHPTTGKLTL VVDGSAEAESLSDDPANP >gi|257257231|gb|ACDX02000013.1| GENE 68 75881 - 76492 965 203 aa, chain + ## HITS:1 COG:NMB2024 KEGG:ns NR:ns ## COG: NMB2024 COG1057 # Protein_GI_number: 15677849 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid mononucleotide adenylyltransferase # Organism: Neisseria meningitidis MC58 # 1 200 1 200 201 326 79.0 2e-89 MKNIGLFGGTFDPIHNGHLHIARAFADEIGLDTVVFLPAGDPYHKDPSRASAQDRLIMTE LAIADDPRFAASDCDIVRNGATYTFDTVQIFRQQFPAAQLWWLMGSDSLMKLHTWKKWQT LVRQTHIAVAMRQGDNLNQTPRELHAWLGEALQNGSVRILNAPLHNTSSTQIRQTLQSGR LSDDLPPKVARYIREHKLYQSGK >gi|257257231|gb|ACDX02000013.1| GENE 69 76594 - 76947 630 117 aa, chain + ## HITS:1 COG:NMA0417 KEGG:ns NR:ns ## COG: NMA0417 COG0799 # Protein_GI_number: 15793422 # Func_class: S Function unknown # Function: Uncharacterized homolog of plant Iojap protein # Organism: Neisseria meningitidis Z2491 # 1 117 12 128 128 205 93.0 2e-53 MVETAVEALEDIKAKDISVLQTQEKTSLFARMIIASGDSTRQVKALANNVAVSLKEAGFE ILSTEGDSGEWTLVDAGDLVVHVMLPAVRDFYDIDTLWGGEKPSFHAGAQKPWHAAD >gi|257257231|gb|ACDX02000013.1| GENE 70 77057 - 77527 916 156 aa, chain + ## HITS:1 COG:NMA0418 KEGG:ns NR:ns ## COG: NMA0418 COG1576 # Protein_GI_number: 15793423 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 1 156 1 156 156 295 96.0 2e-80 MNITVLAVGTKMPRWVDEAVGEYAKRFGRDVAYTLKEIKPEKRGAGVNAAQGMAAEEKRI LEAIPQGAFLIVLDERGKAPTSVELAEHLKSWQQNGEHVCFVIGGADGMTYRLKQQARMM MRLSSLTLPHGMVRVLLTEQLYRAVSILHNHPYHRE >gi|257257231|gb|ACDX02000013.1| GENE 71 78083 - 78433 296 116 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148984739|ref|ZP_01818007.1| IS630-Spn1, transposase Orf1 [Streptococcus pneumoniae SP3-BS71] # 1 116 1 116 116 118 49 9e-26 MAYSADLRNKALNFYEQCKNISQTAATFNLSRNTLYLWIRLKKQTGSLKHQVTGLNAVKL DRQKPAQYVGQHPDAYLHEIAKHFDCTPAAVCYALKQMGMTRKKRPPLTKNKTRPK >gi|257257231|gb|ACDX02000013.1| GENE 72 78883 - 79203 110 106 aa, chain - ## HITS:1 COG:NMA1185 KEGG:ns NR:ns ## COG: NMA1185 COG3547 # Protein_GI_number: 15794129 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Neisseria meningitidis Z2491 # 1 106 213 318 318 196 90.0 7e-51 IGRLSHKRLASLVGIAPHPRESGETKFKSRCFGGRSAVRKALYMATVVATRFEPLIRDFY QRLLSKGKPYKVAITACMRKLLTILNARMRDYFAENGITENGIRTA Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:08:02 2011 Seq name: gi|257257229|gb|ACDX02000014.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont13.1, whole genome shotgun sequence Length of sequence - 77164 bp Number of predicted genes - 67, with homology - 66 Number of transcription units - 42, operones - 15 average op.length - 2.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 386 143 ## NMO_0943 putative phage associated type II DNA-methyltransferase (EC:2.1.1.72) + Term 394 - 422 1.0 - Term 376 - 414 3.6 2 2 Tu 1 . - CDS 595 - 4077 4688 ## COG1196 Chromosome segregation ATPases - Prom 4111 - 4170 3.8 - Term 4118 - 4180 14.2 3 3 Op 1 . - CDS 4206 - 5918 2983 ## COG2268 Uncharacterized protein conserved in bacteria - Prom 5993 - 6052 3.0 4 3 Op 2 . - CDS 6201 - 6893 392 ## gi|261365299|ref|ZP_05978182.1| putative transglycosylase-associated protein 5 3 Op 3 . - CDS 6978 - 7541 412 ## gi|261365300|ref|ZP_05978183.1| conserved hypothetical protein - Prom 7561 - 7620 1.6 6 4 Tu 1 . - CDS 7725 - 8390 931 ## Pnap_3021 hypothetical protein - Prom 8453 - 8512 1.6 7 5 Op 1 . - CDS 8630 - 9112 525 ## COG1764 Predicted redox protein, regulator of disulfide bond formation 8 5 Op 2 . - CDS 9181 - 9408 350 ## gi|261365303|ref|ZP_05978186.1| conserved hypothetical protein - Prom 9549 - 9608 4.3 9 6 Op 1 . + CDS 9537 - 9881 339 ## NMCC_1675 hypothetical protein 10 6 Op 2 . + CDS 9936 - 10373 787 ## NMCC_1675 hypothetical protein + Term 10397 - 10435 -0.2 11 7 Op 1 . - CDS 10472 - 11134 1099 ## GM18_2034 PspA/IM30 family protein 12 7 Op 2 . - CDS 11177 - 11938 764 ## gi|288576098|ref|ZP_05978190.2| hypothetical protein NEIMUCOT_05705 13 7 Op 3 . - CDS 12021 - 12311 279 ## ECB_00662 hypothetical protein 14 7 Op 4 . - CDS 12338 - 12838 558 ## gi|261365309|ref|ZP_05978192.1| conserved hypothetical protein - Prom 12867 - 12926 3.8 + Prom 12821 - 12880 4.0 15 8 Tu 1 . + CDS 13029 - 14525 1747 ## COG0312 Predicted Zn-dependent proteases and their inactivated homologs + Term 14545 - 14594 11.3 + Prom 14611 - 14670 6.6 16 9 Op 1 . + CDS 14691 - 16964 209 ## PROTEIN SUPPORTED gi|157149853|ref|YP_001450520.1| 30S ribosomal protein S1 + Term 16993 - 17033 8.4 + Prom 14611 - 14670 6.6 17 9 Op 2 . + CDS 14691 - 16964 212 ## PROTEIN SUPPORTED gi|222153157|ref|YP_002562334.1| 30S ribosomal protein S1 + Term 16993 - 17033 8.4 + Prom 17118 - 17177 5.0 18 10 Tu 1 . + CDS 17322 - 17663 313 ## NLA_0370 membrane protein + Term 17682 - 17721 8.0 - Term 17666 - 17712 12.1 19 11 Tu 1 . - CDS 17717 - 18559 855 ## COG0121 Predicted glutamine amidotransferase - Prom 18786 - 18845 4.4 - Term 18789 - 18827 7.0 20 12 Tu 1 . - CDS 18857 - 19525 668 ## NMCC_0504 hypothetical protein - Prom 19765 - 19824 7.5 + Prom 19606 - 19665 5.5 21 13 Tu 1 . + CDS 19791 - 19958 61 ## - Term 19800 - 19855 8.9 22 14 Op 1 . - CDS 19868 - 20206 377 ## COG0316 Uncharacterized conserved protein - Prom 20349 - 20408 3.0 23 14 Op 2 . - CDS 20416 - 21108 630 ## COG2932 Predicted transcriptional regulator - Prom 21151 - 21210 5.0 + Prom 21126 - 21185 5.5 24 15 Tu 1 . + CDS 21402 - 21680 352 ## NGK_1687 hypothetical protein + Term 21749 - 21792 2.8 + Prom 21955 - 22014 5.9 25 16 Tu 1 . + CDS 22039 - 24348 2844 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit + Prom 24431 - 24490 3.7 26 17 Op 1 13/0.000 + CDS 24513 - 26099 1773 ## COG0642 Signal transduction histidine kinase 27 17 Op 2 . + CDS 26092 - 27696 2434 ## COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains + Term 27721 - 27756 0.3 28 18 Tu 1 . - CDS 27928 - 28332 325 ## NT05HA_1242 hypothetical protein - Prom 28358 - 28417 3.4 - Term 28508 - 28550 4.6 29 19 Tu 1 . - CDS 28562 - 29548 983 ## COG3547 Transposase and inactivated derivatives - Prom 29694 - 29753 2.3 + Prom 30008 - 30067 11.8 30 20 Op 1 . + CDS 30092 - 31177 1365 ## COG1088 dTDP-D-glucose 4,6-dehydratase 31 20 Op 2 . + CDS 31211 - 31582 216 ## gi|261365323|ref|ZP_05978206.1| conserved hypothetical protein 32 20 Op 3 . + CDS 31636 - 32502 1219 ## COG1209 dTDP-glucose pyrophosphorylase - Term 32568 - 32629 12.0 33 21 Tu 1 . - CDS 32655 - 33506 594 ## COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase - Prom 33537 - 33596 2.4 + TRNA 33747 - 33824 85.4 # Pro TGG 0 0 + TRNA 33852 - 33928 84.3 # Arg TCT 0 0 + TRNA 33945 - 34020 83.3 # His GTG 0 0 - Term 34178 - 34211 2.0 34 22 Tu 1 . - CDS 34231 - 34479 228 ## COG2261 Predicted membrane protein - Prom 34534 - 34593 4.7 + Prom 34493 - 34552 5.5 35 23 Op 1 . + CDS 34682 - 35215 484 ## COG1335 Amidases related to nicotinamidase 36 23 Op 2 . + CDS 35234 - 35731 623 ## COG1247 Sortase and related acyltransferases + Term 35779 - 35819 9.1 - Term 35767 - 35807 9.1 37 24 Op 1 13/0.000 - CDS 35815 - 36231 482 ## COG2969 Stringent starvation protein B 38 24 Op 2 . - CDS 36251 - 36916 378 ## PROTEIN SUPPORTED gi|46133488|ref|ZP_00157281.2| COG0625: Glutathione S-transferase - Prom 36945 - 37004 4.7 - Term 37038 - 37091 19.0 39 25 Tu 1 . - CDS 37181 - 38002 1305 ## COG2171 Tetrahydrodipicolinate N-succinyltransferase - Prom 38061 - 38120 2.5 + Prom 38107 - 38166 4.0 40 26 Tu 1 . + CDS 38262 - 40952 3536 ## COG1391 Glutamine synthetase adenylyltransferase + Term 41135 - 41175 10.8 - Term 41302 - 41367 12.3 41 27 Tu 1 . - CDS 41374 - 42255 823 ## COG1560 Lauroyl/myristoyl acyltransferase - Prom 42438 - 42497 6.6 42 28 Tu 1 . + CDS 42821 - 43102 428 ## COG0640 Predicted transcriptional regulators + Term 43195 - 43238 2.1 + Prom 43111 - 43170 3.7 43 29 Tu 1 . + CDS 43292 - 44062 1254 ## COG0708 Exonuclease III + Term 44073 - 44135 2.5 - Term 44232 - 44269 1.0 44 30 Tu 1 . - CDS 44380 - 45243 245 ## PROTEIN SUPPORTED gi|152985719|ref|YP_001348948.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase - Prom 45473 - 45532 6.8 - TRNA 45758 - 45833 84.9 # Asn GTT 0 0 - Term 45714 - 45753 5.7 45 31 Op 1 . - CDS 45930 - 46289 256 ## COG2018 Uncharacterized distant relative of homeotic protein bithoraxoid 46 31 Op 2 . - CDS 46329 - 46970 298 ## NLA_5110 hypothetical protein 47 31 Op 3 . - CDS 46976 - 47512 534 ## COG2229 Predicted GTPase 48 31 Op 4 . - CDS 47525 - 48619 618 ## NLA_5090 hypothetical protein 49 31 Op 5 . - CDS 48644 - 50089 610 ## NMA2010 hypothetical protein - Prom 50121 - 50180 4.4 50 32 Tu 1 . - CDS 50241 - 51281 280 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase - Prom 51371 - 51430 2.3 + Prom 51621 - 51680 3.6 51 33 Tu 1 . + CDS 51713 - 52711 858 ## COG1376 Uncharacterized protein conserved in bacteria + Term 52808 - 52856 10.3 + Prom 52714 - 52773 5.3 52 34 Tu 1 . + CDS 52996 - 54039 769 ## COG0002 Acetylglutamate semialdehyde dehydrogenase + Term 54045 - 54097 13.0 - Term 54035 - 54081 13.8 53 35 Op 1 20/0.000 - CDS 54138 - 55217 488 ## COG0337 3-dehydroquinate synthetase - Prom 55257 - 55316 2.8 - Term 55343 - 55390 7.6 54 35 Op 2 8/0.000 - CDS 55413 - 55790 209 ## COG0703 Shikimate kinase - Prom 55838 - 55897 3.4 - Term 56447 - 56484 6.4 55 36 Op 1 6/0.062 - CDS 56495 - 58630 1035 ## COG4796 Type II secretory pathway, component HofQ 56 36 Op 2 6/0.062 - CDS 58649 - 59203 367 ## COG3168 Tfp pilus assembly protein PilP 57 36 Op 3 6/0.062 - CDS 59221 - 59907 309 ## COG3167 Tfp pilus assembly protein PilO 58 36 Op 4 8/0.000 - CDS 59908 - 60522 381 ## COG3166 Tfp pilus assembly protein PilN 59 36 Op 5 . - CDS 60524 - 61633 523 ## COG4972 Tfp pilus assembly protein, ATPase PilM - Prom 61785 - 61844 4.9 + Prom 61715 - 61774 5.1 60 37 Tu 1 . + CDS 61816 - 64179 1085 ## COG5009 Membrane carboxypeptidase/penicillin-binding protein + Term 64205 - 64254 14.0 - Term 64778 - 64816 6.0 61 38 Op 1 2/0.188 - CDS 64826 - 66274 351 ## PROTEIN SUPPORTED gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 62 38 Op 2 . - CDS 66325 - 66819 414 ## COG1846 Transcriptional regulators - Prom 66888 - 66947 7.3 + Prom 67130 - 67189 5.6 63 39 Op 1 3/0.062 + CDS 67330 - 67803 380 ## PROTEIN SUPPORTED gi|148994988|ref|ZP_01823966.1| ribosomal protein L11 methyltransferase 64 39 Op 2 . + CDS 67879 - 68562 678 ## COG1738 Uncharacterized conserved protein + Term 68604 - 68651 12.5 - Term 68930 - 68979 12.0 65 40 Tu 1 . - CDS 69017 - 70240 1291 ## COG0739 Membrane proteins related to metalloendopeptidases + Prom 70484 - 70543 4.6 66 41 Tu 1 . + CDS 70629 - 71627 845 ## COG4255 Uncharacterized protein conserved in bacteria + Term 71751 - 71815 13.1 - Term 71742 - 71797 15.0 67 42 Tu 1 . - CDS 71828 - 77164 7044 ## COG5295 Autotransporter adhesin Predicted protein(s) >gi|257257229|gb|ACDX02000014.1| GENE 1 3 - 386 143 127 aa, chain + ## HITS:1 COG:no KEGG:NMO_0943 NR:ns ## KEGG: NMO_0943 # Name: not_defined # Def: putative phage associated type II DNA-methyltransferase (EC:2.1.1.72) # Organism: N.meningitidis_alpha14 # Pathway: Mismatch repair [PATH:nmi03430] # 1 127 133 259 259 238 86.0 5e-62 ATTSKAWDASQVEAKLKAAKDRLKGVYIENESWERCFKRYDREHTFFYADPPYWQTAGYD SAFDWSQYELLAKAMSESKGKVMLSINDHPDIRALFKDFRITQLELTYTVGRDKSGKTSG ELVICNW >gi|257257229|gb|ACDX02000014.1| GENE 2 595 - 4077 4688 1160 aa, chain - ## HITS:1 COG:NMB0545 KEGG:ns NR:ns ## COG: NMB0545 COG1196 # Protein_GI_number: 15676451 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Chromosome segregation ATPases # Organism: Neisseria meningitidis MC58 # 1 1159 1 1159 1161 1667 97.0 0 MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGES MQDVIFNGAATRRPAPRASVELVFDNSDHSLQGAWGQYAEVSIKRQLTRQGESTYFINNQ TVRRRDITDLFLGTGVGARGYAVIEQGMISRIIEARPEELRAYIEEAAGVSKYKERRKET EGRLKDTREHLQRLGDLQNELARQVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQS LAAADKATAQHQSLQAQQDETAAQVQALNDEVHALQTAEQSQQQAVHELSNKRGVLREQI ARLEEQIRHQQNLHQRIERDKQAAQAQMQRIHQEQQQIRVQLEENELQAEEKQTELAEWA MQVAEHEERLPELEEAQATLNAAFQTQQDEANRIRRELALKQQQLAHAEQTVAKHEERKG RLKQENQALNLPDEAETAAAQEAAALLQSQQEHYEEQIIATEEALHAAREAFQTTSNRFQ SLKQQHITLQAQQQALSQILSQQQEAADFWQAIDHAAAPQLWQHITAPAEWQHALSVLLA ERLHARSVPHGFVPPAPLPQGQAAWLSDDLSGGIKKSLPVQALLNQIQAQPPFQTALHHW LDGVLCAPDLTYALAHQSDLGAHQIWLTPEGHQVDKVSVLLYAKPAQESLIAQKARLDGI ASELENLAPELSAAEAAFKQAEAAVRSSETQHKNLMQQQQQHTRQYSQAQQRAAELLART NQGQIRREHITRELAQLAEEQTVLQHTSDGLSDDIATLQEAAAELEHQQQTTAHSRQEQQ GRLKQAQLALLEANRQYGLAEVAVHKLNQQKQNYQQQIARLEQQTLDWQERQQELALAYE TEFQNDEQHIKLDELTEAVHKLDEEYIAVQDKLAQIQEQGREQYARVQTLQTKLPQLQAA TQTALLQQQEALINAKRYHQNLTERAADLDALEALAKESPKVLNSSIGSLTQQIEALGAV NLAALQELEEARERDGYYRSQSEDVQAAISLLEEAIAQIDDKTKARFKETFDAVNGKVQT FFPTLFGGGEATLKMIGDDLLTAGVSIMARPPGKKNSTIHLLSGGEKALTAMSLVFALFS LNPAPFCLLDEVDAPLDDANTSRFCNLVKEMSAQTQFLYISHNRLTMEMAEQLVGVTMQE KGVSRVVAVDIKQALEMAEP >gi|257257229|gb|ACDX02000014.1| GENE 3 4206 - 5918 2983 570 aa, chain - ## HITS:1 COG:ECs3933 KEGG:ns NR:ns ## COG: ECs3933 COG2268 # Protein_GI_number: 15833187 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 10 563 15 542 553 398 49.0 1e-110 MNLVSIGIIAGVILVALFVLGLILTRLYRRASKEVSFVRTGFGGEKVIMNGGAMVLPVLH EIIPVNMNTLRLEVRRAAQQALITRDRMRVDVMAEFYVRVKPSAESIATAAQTLGMKTMS PDELKDLVEGKFVDALRAVAAEMAMEELHEKRVDFVQKVQQVVSEDLFKNGLELETVSLT GLDQTSFEFFNPQNAFDAEGLTKLTETIEGRRKKRNEIEQDTDLAIKTKNLEAEQQRLKI SREEEYAKLEQEREIAVRRAEQEASIAEQEAQKKREAEEAKIAAEREVDLKRIAAERDIK NEDIRKAQAVEQAEVERRKAIELAEQDRAIAVAEKSRAESEAKAEADKARAAAVREEESV ITVRETERAERAKAVELIAAEEAAQKDAISLTVAAEAEKQAAQDRAEAVRIAAEAEAEKQ RLQAKGEADAKVLLAQAQEQQYKVDAEGTRAVNEAANVLSVEQVEMQVRLALLKHLPDII RESVRPMENIDDIKILQVNGLGGFSGAANGSEGVSDGQTTQASLADQMVNSALRYRSQAP LVDGLLKELGLNGGDINGLTQGLDKGIGKE >gi|257257229|gb|ACDX02000014.1| GENE 4 6201 - 6893 392 230 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261365299|ref|ZP_05978182.1| ## NR: gi|261365299|ref|ZP_05978182.1| putative transglycosylase-associated protein [Neisseria mucosa ATCC 25996] putative transglycosylase-associated protein [Neisseria mucosa ATCC 25996] # 1 230 1 230 230 418 100.0 1e-115 MDNSLNNEPSLEKSNSAALWLKRTAVLILWLAAFLSGVTALYGLTRVGNEPANLILVALL SAGAWYGIYFGGRLTGWFRSSENPQIRYPSIHWAIWTLETFFALFFASIIFDKQNIGLVV FCLIFSGLAGVSAYLRGKRLIADYRLRKNTEVRATVWRLIWSFIFALLWSATILLCLYAL LRQMALPEGIEPATFCFIFILTVLSGCAAYYCWNGLAKLFQKYAQQQKTW >gi|257257229|gb|ACDX02000014.1| GENE 5 6978 - 7541 412 187 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261365300|ref|ZP_05978183.1| ## NR: gi|261365300|ref|ZP_05978183.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 187 1 187 187 330 100.0 2e-89 MDHLAQPERDMQSRIEALKNKLPRGVIAVGDGLLFKHSLFRGLLFQPLVAFLFGLIGVGG LWLKIVKWMDLSLSSNMTWLLAIVFTLWWLWRAERWWCGLTTRKSIYIDREKLIIYGAFG RIRYQGGHDGAYRKFNHIRDIVGVSLITERKGTTLIGGLLGLGRHNICTTASQNAFIELT GWQWNSR >gi|257257229|gb|ACDX02000014.1| GENE 6 7725 - 8390 931 221 aa, chain - ## HITS:1 COG:no KEGG:Pnap_3021 NR:ns ## KEGG: Pnap_3021 # Name: not_defined # Def: hypothetical protein # Organism: P.naphthalenivorans # Pathway: not_defined # 4 220 3 206 206 134 40.0 3e-30 MWNLINAPETEIFGIAIALMVLLGVLEVISMLAGGISDWLDNLLPDSLTETAHAEVGLDA ADAGVFVRFLSWLYVGRVPVLMLMVVFLAVYGLTGYLFQTTFAAVFGSYLNGWLAAVAVW FLSLPLVRLTAGGLYKIMPKDETTAVSQESLIGRIGTVVLGEARAGSAAQVRVKDVYGQQ HYVMAEPDSDEVLKQGDAVLLVSLKGNTFKAILNPSGSLVD >gi|257257229|gb|ACDX02000014.1| GENE 7 8630 - 9112 525 160 aa, chain - ## HITS:1 COG:AGc1844 KEGG:ns NR:ns ## COG: AGc1844 COG1764 # Protein_GI_number: 15888346 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 3 155 24 174 176 172 54.0 2e-43 MSKKHTYRTATTWTGNLGEGTSSYTAYLRNFTVSAEGKPDLHGSADPAFRGDAGRWNPEE MLLAAVSACHKLWYLHLCADAGICVTAYTDHAEAVMDEGGNGSAGRFVSAVLKPRVTIAA GSDRAKALELHHEAHRLCFIANSVNFPIECRAEIESKEVV >gi|257257229|gb|ACDX02000014.1| GENE 8 9181 - 9408 350 75 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261365303|ref|ZP_05978186.1| ## NR: gi|261365303|ref|ZP_05978186.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 75 1 75 75 124 100.0 2e-27 MIFAILIGLLTAVLLYFVMFKDWDEFVECVEFYCTPDIISALRGRYWDDVWAETKILLWL GISLAAGASAYAWLN >gi|257257229|gb|ACDX02000014.1| GENE 9 9537 - 9881 339 114 aa, chain + ## HITS:1 COG:no KEGG:NMCC_1675 NR:ns ## KEGG: NMCC_1675 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_053442 # Pathway: not_defined # 41 113 44 116 117 83 52.0 2e-15 MKHSQSQYTKPSKPLLKKLLLPVAAVCAIFLAAEGFDLYEDYAQYRMETDPAFAQHHDRA LSILHSRGYEVHDSDTDLHWARPVLEFEAYKGSLEYKIVMSYPDLNILVERVDL >gi|257257229|gb|ACDX02000014.1| GENE 10 9936 - 10373 787 145 aa, chain + ## HITS:1 COG:no KEGG:NMCC_1675 NR:ns ## KEGG: NMCC_1675 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_053442 # Pathway: not_defined # 69 144 41 116 117 97 59.0 2e-19 MKKLLPVLLLGSIALTACAAPYPYDYYDDDYRTDRYEQRYDRYDDRYDDRYERDYDRYDD YRYRDGKYYDDDYIEHQIYSDPSFEQKRAQVMRILERRGYQVHEIEADDRRGRPVLKAEA FKNGREYDIVFSWPDLRIISERIDY >gi|257257229|gb|ACDX02000014.1| GENE 11 10472 - 11134 1099 220 aa, chain - ## HITS:1 COG:no KEGG:GM18_2034 NR:ns ## KEGG: GM18_2034 # Name: not_defined # Def: PspA/IM30 family protein # Organism: Geobacter_M18 # Pathway: not_defined # 1 220 1 222 223 132 41.0 9e-30 MSETLSRRVGRLVSGGFHALIDAAENLVPEAAMNESIREIERAVDEVRAELGKVLAQKHL AAKKMADESNRHEAIDANLQAAVAAGRDDLAEAGIAEQMDIEARLPVLENTIADCAAQEK ELEGFIAALQAKKREMQQQLQDWRAAQQSAGAGKAAGGSDLNRIARDAEKSGNAFDRVMG RQNAVHSSTDAAQLAKLKELEDLSRNNRIAERLAALKAGK >gi|257257229|gb|ACDX02000014.1| GENE 12 11177 - 11938 764 253 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|288576098|ref|ZP_05978190.2| ## NR: gi|288576098|ref|ZP_05978190.2| hypothetical protein NEIMUCOT_05705 [Neisseria mucosa ATCC 25996] hypothetical protein NEIMUCOT_05705 [Neisseria mucosa ATCC 25996] # 1 253 11 263 263 506 100.0 1e-142 MEKWIAEAYELFAPYSVRFPLNICTCNCCSPEDFQQALLEYPLREIPTDMLQAYLGSVPL DKGAATALDMKHFLPRILQALVNDEDVRSLDETLLDKLRCDLPECWTKEEIDWLKRFAAA WFDSQLTAPRYEGCLVVWLNMFQFAGLDVVDELLALWTEQADKTAALRDFVDLYLEIPYG SNEPDWYKVCYLPEHCPNRTQFAARLSAWFTHPNTRTTFRRALEQALLEGKEDENETLSW EQCYDWLAQSNAG >gi|257257229|gb|ACDX02000014.1| GENE 13 12021 - 12311 279 96 aa, chain - ## HITS:1 COG:no KEGG:ECB_00662 NR:ns ## KEGG: ECB_00662 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_B_REL606 # Pathway: not_defined # 29 96 23 91 91 63 43.0 3e-09 MKIHHWLLTCMFIYPSLAARADSGAQPVTEQQALRLTEIYVTQHYGKETAQAQKPYRVKK DGEHWIISGKPPKALGGNFRAVIGANGQLEKITHSK >gi|257257229|gb|ACDX02000014.1| GENE 14 12338 - 12838 558 166 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261365309|ref|ZP_05978192.1| ## NR: gi|261365309|ref|ZP_05978192.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 166 1 166 166 289 100.0 4e-77 MNATNRIPVSVRITQEDADFIAELKIEGANTPSEKIRELLKQARLAHTQTRDYGSALTAQ EQFFQAAKHDVLYAEKQAGVHSHIVARLFEQLPDLGATLAADLPEEADLDSLKKYERELM WRIVRLTDSILQLAVTGKGAAYDDTVLQQLENTLKLAKIVQQAGEV >gi|257257229|gb|ACDX02000014.1| GENE 15 13029 - 14525 1747 498 aa, chain + ## HITS:1 COG:NMA0367 KEGG:ns NR:ns ## COG: NMA0367 COG0312 # Protein_GI_number: 15793375 # Func_class: R General function prediction only # Function: Predicted Zn-dependent proteases and their inactivated homologs # Organism: Neisseria meningitidis Z2491 # 19 498 1 480 480 849 91.0 0 MPYNQAPSFPSPEGRLKTMHSTYATVQRDLLEANHLSPELLAKSLSIIGAHHVDYADIYC QRTAFESWHLEEGIVKSGSFQIDQGVGVRAVSGEKTAFAYADSLCIDSINRSAQAVRVIG ASGGEVSVKVPSVAHGKSVHATLNPIIGLDSAAKVALLNKVEMLAKAADPRIVQVMAGLT CEYDMIYIARLDGRHAADIRPMVRLNVTVIAKQGERREQGSAGGGGRYDLAYFDETLVRQ FVDSAVKQALINLESRPAPAGEMTVVLGNGWPGVLLHEAVGHGLEGDFNRKETSVFSGRI GERVAAKGVTVVDQGDIADRRGSLNIDDEGNETRRTVLIEDGILVGYMQDETNARLMGTQ STGNGRRESYASAPMPRMTNTFMENGGYEPDEIIASIDKGIYAVNFGGGQVDITSGKFVF SASEAWWVEGGKLQYPVKGATIIGNGPEVLKHVSMIGNDTALDSGVGVCGKDGQSVPVGV GQPTLRIDAGLTVGGSEI >gi|257257229|gb|ACDX02000014.1| GENE 16 14691 - 16964 209 757 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157149853|ref|YP_001450520.1| 30S ribosomal protein S1 [Streptococcus gordonii str. Challis substr. CH1] # 637 756 276 400 401 85 38 1e-15 MNITQILSQELSATAAQITAAVELLDDGATVPFIARYRKEATGGLDDTQLRQLAERLQYL RELEERKAVVLKSIEEQGKLSDDLRAQIEAADNKTALEDLYLPYKPKRRTKAQIAREHGL QPLADALLAEQPQDVEAAAQGYLNENVPDTKAALDGARAILMEQFAEDAELIGTLRDKLW NEAEIHAQVVEGKETEGEKFSDYFDHREPVRAMPSHRALAVLRGRNEGVLNIALKYQPDD TPITQQSEYEQLIARRFKVSDDHKWLRDTVRLTWRAKIFLSLELEALNRLKEAADTDAIT VFARNLKDLLLAAPAGRLTTLGLDPGYRNGVKCAVVDDTGKLLDTVIVYLHQENNMLATL SRLIKQHGVKLIAIGNGTASRETDKIAGELVRGMPESSLHKIVVSEAGASIYSASELAAR EFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVNQSQLAKSLDAVVEDCV NAVGVDVNTASAPLLARISGLNQTLAQNIVAYRDENGAFDSRKKLLKVPRLGEKTFEQAA GFLRINGGKEPLDASAVHPEAYPVVAKMLAQQGITAAELIGNRERVKQIKASDFTDERFG LPTILDILSELEKPGRDPRGEFQTASFAEGIHEISDLQVGMILEGVVSNVANFGAFVDIG VHQDGLVHISALSNKFVQDPREVVKAGDVVKVKVLEVDAARKRIALTMRLDDEARGASKS NRSSEGKHSERRDRKPQRNERTPTNSAMADAFAKLKR >gi|257257229|gb|ACDX02000014.1| GENE 17 14691 - 16964 212 757 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|222153157|ref|YP_002562334.1| 30S ribosomal protein S1 [Streptococcus uberis 0140J] # 637 756 276 404 405 86 37 5e-16 MNITQILSQELSATAAQITAAVELLDDGATVPFIARYRKEATGGLDDTQLRQLAERLQYL RELEERKAVVLKSIEEQGKLSDDLRAQIEAADNKTALEDLYLPYKPKRRTKAQIAREHGL QPLADALLAEQPQDVEAAAQGYLNENVPDTKAALDGARAILMEQFAEDAELIGTLRDKLW NEAEIHAQVVEGKETEGEKFSDYFDHREPVRAMPSHRALAVLRGRNEGVLNIALKYQPDD TPITQQSEYEQLIARRFKVSDDHKWLRDTVRLTWRAKIFLSLELEALNRLKEAADTDAIT VFARNLKDLLLAAPAGRLTTLGLDPGYRNGVKCAVVDDTGKLLDTVIVYLHQENNMLATL SRLIKQHGVKLIAIGNGTASRETDKIAGELVRGMPESSLHKIVVSEAGASIYSASELAAR EFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVNQSQLAKSLDAVVEDCV NAVGVDVNTASAPLLARISGLNQTLAQNIVAYRDENGAFDSRKKLLKVPRLGEKTFEQAA GFLRINGGKEPLDASAVHPEAYPVVAKMLAQQGITAAELIGNRERVKQIKASDFTDERFG LPTILDILSELEKPGRDPRGEFQTASFAEGIHEISDLQVGMILEGVVSNVANFGAFVDIG VHQDGLVHISALSNKFVQDPREVVKAGDVVKVKVLEVDAARKRIALTMRLDDEARGASKS NRSSEGKHSERRDRKPQRNERTPTNSAMADAFAKLKR >gi|257257229|gb|ACDX02000014.1| GENE 18 17322 - 17663 313 113 aa, chain + ## HITS:1 COG:no KEGG:NLA_0370 NR:ns ## KEGG: NLA_0370 # Name: not_defined # Def: membrane protein # Organism: N.lactamica # Pathway: not_defined # 1 113 1 113 113 167 84.0 2e-40 MKPVLFAALISCFSVAAYAACTDSQQQCVIYKNGNVAAEGGCSINKCQNADAQVLKWKLK NGKGVTVEIGKNGKVLVNKKPGAKANNSNAAGMGLTCYAADADKREQFCSTNY >gi|257257229|gb|ACDX02000014.1| GENE 19 17717 - 18559 855 280 aa, chain - ## HITS:1 COG:NMB1815 KEGG:ns NR:ns ## COG: NMB1815 COG0121 # Protein_GI_number: 15677651 # Func_class: R General function prediction only # Function: Predicted glutamine amidotransferase # Organism: Neisseria meningitidis MC58 # 1 280 1 280 280 525 87.0 1e-149 MCQLLGMNCNTPTDIMFSFEGFRRRGGITDHHADGFGIGFFEGKGVRLFHDDKPSADSPV ADLVRAYQIKSENVIAHIRKASQGQTSLANTHPFMREMWGEYWLFAHNGHLIDFYPEQGE YYHAVGTTDSERSFCYILNRLRSRFAEKPDSDTLFDAVAALTHEIRRFGLFNFVMSNGDC LFAHASTLLHYIVRKAPFGKARLLDDDVMIDFSAVTTPNDKVSVIATLPLTRDETWSQLA VDELVMFRDGDIVRSDRPESPVYMSAEEGLAIARAVGVSV >gi|257257229|gb|ACDX02000014.1| GENE 20 18857 - 19525 668 222 aa, chain - ## HITS:1 COG:no KEGG:NMCC_0504 NR:ns ## KEGG: NMCC_0504 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_053442 # Pathway: not_defined # 5 83 7 85 151 90 51.0 6e-17 MKNSDKLYDVYVSYPPDVDHERINACLYDNLPEKEAEDLVQALSERPQAIIAENCTQDER ENAQQYFNYLGLDVIVRQSMELQVSEDEDENEEVSLKQCPVCMTITEDVAADECAVCHFH FASATEQIIQRKRIEWQEKVAFEHKKQAEIAHKLQLEKEREEKLMRKEIRAELESKLRQE LGQDPRLEALTSKRNMIVLVSVLGVLAMFGLVAAGYLAAKYL >gi|257257229|gb|ACDX02000014.1| GENE 21 19791 - 19958 61 55 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIFIEKQLQTKGRLYKQTAFFYLYATQTEKDDPQPQVVSAFGLRITNCDPCKLSV >gi|257257229|gb|ACDX02000014.1| GENE 22 19868 - 20206 377 112 aa, chain - ## HITS:1 COG:NMA0739 KEGG:ns NR:ns ## COG: NMA0739 COG0316 # Protein_GI_number: 15793715 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 1 112 1 112 112 213 97.0 5e-56 MSDESPIIFTDSCCTKVADLIAEENNPDLKLRVFVNGGGCSGFQYGFTFDEIKNDDDFEI QKNGLTFLVDPMSYQYLVGAEIDYTESLQGSQFVIRNPNAETTCGCGSSFSV >gi|257257229|gb|ACDX02000014.1| GENE 23 20416 - 21108 630 230 aa, chain - ## HITS:1 COG:NMB0556 KEGG:ns NR:ns ## COG: NMB0556 COG2932 # Protein_GI_number: 15676461 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Neisseria meningitidis MC58 # 1 230 1 228 228 397 82.0 1e-110 MDTFKDRLVFLWKDEARQAKIAADIDMTIAGFSRIWNEGGLPKSETLKKIKQLKGCSIDW LLTGEGSPFPNAQVPSSTAVAYDTLGNPVDIDEFVFVPRYDIQAAAGHGRLVGDEKPVFT MAFRRYWVENYVTRDTKNLSVISVKGDSMEGVLNDGDTILINHAETAPKDGLYVLRLNEN LLVKRLQLVPGGVVNVISANEAYPTFEIDLNNLTDDVAIIGRVEWFGRNI >gi|257257229|gb|ACDX02000014.1| GENE 24 21402 - 21680 352 92 aa, chain + ## HITS:1 COG:no KEGG:NGK_1687 NR:ns ## KEGG: NGK_1687 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 15 92 10 90 90 73 40.0 4e-12 MNRYRKNAWLAVAAFVLGFLAFPFSYSEAHQSSEQNLSAEMCDRLSGMASDKMDGIQLSV AQECDTLEASHDWEQQYGGLNEHEIIAGIVYE >gi|257257229|gb|ACDX02000014.1| GENE 25 22039 - 24348 2844 769 aa, chain + ## HITS:1 COG:NMA1802 KEGG:ns NR:ns ## COG: NMA1802 COG0188 # Protein_GI_number: 15794693 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Neisseria meningitidis Z2491 # 16 766 13 763 765 1345 92.0 0 MSQHVSVPSPVGEDYLLLGQYAERAYLEYAMSVVKGRALPEVSDGQKPVQRRILFAMRDM GLAAGAKPVKSARVVGEILGKYHPHGDSSAYEAMVRMAQDFTLRYPLIDGIGNFGSRDGD GAAAMRYTEARLTPIAELLLSEINQGTVDFVPNYDGAFDEPLHLPARLPMVLLNGASGIA VGMATEIPSHNLNEVTQAAIALLKKPTLETADLMQYIPAPDFAGGGQIITPADELRRIYE TGKGSVRVRARYEIEKLARGQWRVIVTELPPNANSAKILAEIEEQTNPKPKAGKKQLNQD QLNTKKLMLDLIDRVRDESDGEHPVRLVFEPKSSRIDTDTFINTLMAQTSLEGNVSMNLV MMGLDNRPAQKNLKTILQEWLDFRVVTVTRRLKFRLNQVEKRLHILEGRLKVFLHIDEVI KVIRESDDPKADLMAAFGLTEIQAEDILEIRLRQLARLEGFKLEKELNELREEQGRLNIL LGDENEKRKLIIKEMQADMKQFGDARRTLVEEAGRAVLTQTTADEPITLILSEKGWIRSR AGHNLDLSQTAFKEGDRLKQTLEGRTVLPVVILDSLGRTYTLDAAEIPGGRGDGVPVSSL IELQNGAKPVAMLTGQPEQHYLLSGSGGYGFIAKLGDMVGRVKAGKVVMTVDSGETVLPP IAVYASSLINPDCKIVLASSDHRLLAFSIGELKVMPKGRGLQLMSLTEGASLEHVLVTTA AEFIVETVGKRGAAHQEKLRICDIEGKRGKKGKVLDISGRLKTLSAASE >gi|257257229|gb|ACDX02000014.1| GENE 26 24513 - 26099 1773 528 aa, chain + ## HITS:1 COG:NMA1803 KEGG:ns NR:ns ## COG: NMA1803 COG0642 # Protein_GI_number: 15794694 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Neisseria meningitidis Z2491 # 1 494 1 491 505 474 48.0 1e-133 MSKSGFQELGNLSERIPGLINIARIAIVLPLLVMHAFGVYSNGTHIGMSFPPVEFYSWAA LYSFLILLSVARPDWQWQTLDLPNASAVVDISMMILVYIAGGVDSGFGILVLPFVATSCL LSYGHYPMLYAGYASMLFFFNLLLDGSIRLHPFDWDTQPLITTVLLSGACYLVAMLTSFA ARYLEQATESASRHQLAYRRISGLNRLVLNRVQEAVIVIDSTQRVWLFNKQAKTYFPGLV VDQQEVVFGELVTRWQYHPDKPFETDIHIFQHAMHVRAVPLIQEQTELLMLYVRSLREVA AEAMSTKLTSLGQLTANLAHEIRNPMSAIRHASDLLQESDDDAEPDPVKAKLCGIIDSNI QRIDKMLEDISLLNKRDNISREPINLMKFWLDFKQEFTLNNSEAIGCLRMNMDGNNLTVL ADVMHIQQIMWNLCNNAWRHSRQDENAITVLIRPSGRMHISIVVADNGKGISPEVRNHLF EPFYTTEKQGTGLGLYVARELAHANMGQLHYHPEMNGFELILPREHNE >gi|257257229|gb|ACDX02000014.1| GENE 27 26092 - 27696 2434 534 aa, chain + ## HITS:1 COG:XF2545 KEGG:ns NR:ns ## COG: XF2545 COG2204 # Protein_GI_number: 15839134 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains # Organism: Xylella fastidiosa 9a5c # 9 531 35 494 497 396 44.0 1e-110 MSKLQDPVLVVDDEADIRDLMEMTLMKMGLRVQTAVGVEDAKDKLDNNDYSLVLTDMRMP DGSGLEVVQYIDELMLDTPVAVITAFGNADQAVEALNAGAFDYLQKPITLSQLRSLVKSA VSVSNSTDEIAQPPIEKPSAPVAAAFNKPKTPPKPPKRDLSGSVTVPEGLRSMKERFATG EIAMRANEDVPELGGEEDMPRLLGSSPQMVEVRHLIRRLARSGVPVYISGESGTGKEQAA RTIHELSDRADKPFIAVNCGAIPENLMESEFFGYKKGSFTGADQDRLGFFQHADGGTLFL DEVADLPLAMQVKLLRAIQEKAVRRIGDARETFVDVRIICATHKNLEALVDSGAFRQDLY YRLNVVTLHMPPLREMREDLGALILYLLYKHRHGTQTYKLSPKAQEALLHYSYPGNFREL ENILERAVALTVGQVIQLDDLQIQNTPTPRNDHPNLDLDDIADSETQKGETLDHQPLPPF DPRTMQIQDYLDQIERGIIEQALQQTRYNRTQAAKLLGISFRSMRYRMERLDIN >gi|257257229|gb|ACDX02000014.1| GENE 28 27928 - 28332 325 134 aa, chain - ## HITS:1 COG:no KEGG:NT05HA_1242 NR:ns ## KEGG: NT05HA_1242 # Name: not_defined # Def: hypothetical protein # Organism: A.aphrophilus # Pathway: not_defined # 1 128 69 196 196 218 80.0 8e-56 MGRELGVPEHKMRPAVYLAFADMVLGMIPVVGTLIDIFLQPSRRTLKVINEHVRSEYGID YDLHLERPFMHAALEKKQQKSDFWRKPVAAWLYLHLPDFFGLIVLVLMGWITVAVSKWAW SGMAYLFHAVAGWF >gi|257257229|gb|ACDX02000014.1| GENE 29 28562 - 29548 983 328 aa, chain - ## HITS:1 COG:NMA1185 KEGG:ns NR:ns ## COG: NMA1185 COG3547 # Protein_GI_number: 15794129 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Neisseria meningitidis Z2491 # 16 328 6 318 318 548 92.0 1e-156 MQGRFMMSTQHNYAGIDIAKRNFVIAVSSLSKTKTETNNPKGIAHTVEYLKKHNVALVVM ESTGGLEIPAAKAIHRSGIAVIIANPRQTHQFAQSQSLTKTDAKDAKMLAFFAQMMMQKE GWQTMLYQPPTEAEEVLEALVNRRNQLVDMRTAEKNRLHQVHETQVESVKQLIAHFDRLI DELDKQIDDHTHTHFDGKAKVAKQIKGIGSTTTATLMAMLPELGRLSHKRLASLVGIAPH PRESGETKFKSRCFGGRSAVRKALYMATVVATRFEPLIRDFYQRLLSKGKPYKVAVTACM RKLLTILNARMRDYFAENDTTENGIQTA >gi|257257229|gb|ACDX02000014.1| GENE 30 30092 - 31177 1365 361 aa, chain + ## HITS:1 COG:NMB0063 KEGG:ns NR:ns ## COG: NMB0063 COG1088 # Protein_GI_number: 15676000 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-D-glucose 4,6-dehydratase # Organism: Neisseria meningitidis MC58 # 1 352 1 352 355 688 92.0 0 MKKILVTGGAGFIGSAVVRHIIKNTQDSVVNLDKLTYAGNLESLTDVADSLRYAFEQVDI CDRAELGRVFAQHQPDAVMHLAAESHVDRSIDSAGEFIQTNIVGTFNLLEAARTYWQQMS SEKQAAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRTYGL PTIVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQVV TEGVVGETYNIGGHNEKANIEVVKTICALLEELVPEKPAGVARYEDLITFVQDRPGHDVR YAIDAAKIGRELGWKPQETFESGIRKTVQWYLDNKTWWQNVLNGNYRLERLGKLQTMQSF Y >gi|257257229|gb|ACDX02000014.1| GENE 31 31211 - 31582 216 123 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261365323|ref|ZP_05978206.1| ## NR: gi|261365323|ref|ZP_05978206.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 123 1 123 123 243 100.0 5e-63 MYSPFRIFLLATLTSVLFVSTPISAKETRHHVAQTTVQKTIKADGSSIERAIVIIENDTM RGIAAEYSWIEEHMPEYRVVGQALLKKNDSVYDRIDVQNEAGDIRSIYFDIKSFFGMRNG KPL >gi|257257229|gb|ACDX02000014.1| GENE 32 31636 - 32502 1219 288 aa, chain + ## HITS:1 COG:NMB0062 KEGG:ns NR:ns ## COG: NMB0062 COG1209 # Protein_GI_number: 15675999 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-glucose pyrophosphorylase # Organism: Neisseria meningitidis MC58 # 1 288 1 288 288 549 90.0 1e-156 MKGIILAGGSGTRLYPITRGVSKQLLPVYDKPMIYYPLSVLMLAGIREILVITTPEDNPS FRRLLGDGSDFGISISYAEQPSPDGLAQAFIIGEEFIGNDNVCLVLGDNIFYGQSFTQTL KQAASKQHGATVFGYQVKDPERFGVVEFDENFNALSIEEKPKQPKSDWAVTGLYFYDNRV VEFAKQVKPSARGELEISTLNQMYLDDGSLSVQLLGRGFAWLDTGTHESLHEAASFVQTV QNIQDLQVACLEEIAWRNGWLSDERLEELARPMAKNQYGQYLLHLLKK >gi|257257229|gb|ACDX02000014.1| GENE 33 32655 - 33506 594 283 aa, chain - ## HITS:1 COG:NMA0354 KEGG:ns NR:ns ## COG: NMA0354 COG0190 # Protein_GI_number: 15793364 # Func_class: H Coenzyme transport and metabolism # Function: 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase # Organism: Neisseria meningitidis Z2491 # 1 283 1 283 284 475 86.0 1e-134 MAAQLINGKEVSVKRLAKVAEAVVKRQEDGLREPCLAVILVGNDPASAVYVRNKKLACEK CGIRSLSYELPESTSQEELLDLVGRLNEDDAVDGILVQLPLPAHIDSQAVLENIVPHKDV DGFHPYNIGRLVVKMPLMRPCTPKGVMTLLEEYGVDPKGKKAVVVGASNIVGRPQALELL LARATVTVCHSATQNLADEVAAADILVVGVGIPNFVKGSWIKPGAVVIDVGINRLEDGSL CGDVEFDVAKERAGMITPVPGGVGPMTIATLLENTLHAAALHD >gi|257257229|gb|ACDX02000014.1| GENE 34 34231 - 34479 228 82 aa, chain - ## HITS:1 COG:PA5424 KEGG:ns NR:ns ## COG: PA5424 COG2261 # Protein_GI_number: 15600617 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Pseudomonas aeruginosa # 1 81 1 81 81 60 51.0 1e-09 MGWIVTIIIGFIVGALAKFLHPGKENFGFIMTTLLGIGGSALAGFVGQKLGWYHVGEPAG WIASTIFAVIILAVYTRFLKNR >gi|257257229|gb|ACDX02000014.1| GENE 35 34682 - 35215 484 177 aa, chain + ## HITS:1 COG:PA3846 KEGG:ns NR:ns ## COG: PA3846 COG1335 # Protein_GI_number: 15599041 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Pseudomonas aeruginosa # 9 174 11 176 180 118 40.0 4e-27 MNTENTLCLIVDIQERLLPALHGSEQMVEHCRILLQGLSALNIPFAATEQYPKGLGKTVP AISLLLHNTPIFEKTRFSAASPEVMAILKEKQIENIILIGAEAHICMLQTTLDLLKHNIR VHIPYECTTSRNPLNKDNALQQMLTAGAAVSNVESLLFNLMGDAKHPAFKTISKLIQ >gi|257257229|gb|ACDX02000014.1| GENE 36 35234 - 35731 623 165 aa, chain + ## HITS:1 COG:BS_ywnH KEGG:ns NR:ns ## COG: BS_ywnH COG1247 # Protein_GI_number: 16080709 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase and related acyltransferases # Organism: Bacillus subtilis # 4 165 2 163 163 159 46.0 2e-39 MEYTITLAKTEDLPDIVEIYNSTIEARQSTADLSPVSIETRKPWFEAHSGKRPLYVLKNH SGELLAWGSFSDYYPRHAYHISAEISIYVRHNMRGVGVGKILLRNMLERAPSLGIKNVLA VIFGHNHPSLHLFHSFGFQEWGRLPAVCDLETFEADVVILGKRIT >gi|257257229|gb|ACDX02000014.1| GENE 37 35815 - 36231 482 138 aa, chain - ## HITS:1 COG:NMA0499 KEGG:ns NR:ns ## COG: NMA0499 COG2969 # Protein_GI_number: 15793498 # Func_class: R General function prediction only # Function: Stringent starvation protein B # Organism: Neisseria meningitidis Z2491 # 1 118 1 118 130 193 74.0 7e-50 MTTSTKPYLLRALYEWCTDNGQTPHLVVWVNEHTRVPMQYVRDNEIVLNIGPTASHNLNI DNDWISFSARFGGVAHDIWIPVGHVISIFSRESGEGMGFEVEPYESDASGNEAQQEPAAD KPTDGESAKSGKVLKFVK >gi|257257229|gb|ACDX02000014.1| GENE 38 36251 - 36916 378 221 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|46133488|ref|ZP_00157281.2| COG0625: Glutathione S-transferase [Haemophilus influenzae R2866] # 20 215 9 203 212 150 39 3e-35 MFNGRIRRRPSETGYRSPITMMTLYSGITCPFSQRCRFVLYEKGMDFEIKDVDIFNKPED LAVMNPYNQVPVLVERDLILHESNIINEYIDERFPHPQLMPGDPVMRGRGRLVLFRMEKE LFNFVHVLENPNATNKEQTKAREAIGNGLTMLAPAFAKSKYILGEDFSMIDVALSPLLWR LDHYDIKLGKSAAPLLKYAERIFQREAFIEALTPAEKAMRR >gi|257257229|gb|ACDX02000014.1| GENE 39 37181 - 38002 1305 273 aa, chain - ## HITS:1 COG:NMA2153 KEGG:ns NR:ns ## COG: NMA2153 COG2171 # Protein_GI_number: 15795024 # Func_class: E Amino acid transport and metabolism # Function: Tetrahydrodipicolinate N-succinyltransferase # Organism: Neisseria meningitidis Z2491 # 1 273 1 273 273 523 98.0 1e-148 MSLQNIIETAFENRADITPTTVTPEVKEAVLETIRQLDSGKLRVAERLGVGEWKVNEWAK KAVLLSFRIQDNEVLNDGVNKYYDKVPTKFADWSEDEFRAAGFRAVPGAVARRGSFVAKN VVLMPSYVNIGAYVDEGAMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQASPTIIED NCFIGARSEIVEGVIVEEGSVISMGVFIGQSTKIFDRTTGEIYQGRVPAGSVVVSGSMPS KDGSHSLYCAVIVKRVDAQTRAKTSVNELLRGI >gi|257257229|gb|ACDX02000014.1| GENE 40 38262 - 40952 3536 896 aa, chain + ## HITS:1 COG:NMA0035 KEGG:ns NR:ns ## COG: NMA0035 COG1391 # Protein_GI_number: 15793067 # Func_class: O Posttranslational modification, protein turnover, chaperones; T Signal transduction mechanisms # Function: Glutamine synthetase adenylyltransferase # Organism: Neisseria meningitidis Z2491 # 1 893 1 893 896 1701 96.0 0 MSDNRLDTARRHSLFLARQLDNGKLKPEIFLPMLDKVLTEADFQAFADWDKIRTEENEEE LARQLRELRRYVVSQIIVRDINRISDLNEVTRTITLFADFAVNTALDFAYAYYRDMYGTP IGRYTKSPQHLSVVAMGKAGGYELNVSSDIDLIFVYPESGDTDGRRERGNQEFFTKVGQK LIALLNDITADGQVFRVDMRLRPDGDSGALVLSETALEQYLITQGREWERYAWCKGRVVT PYLNDIKSLVRPFVFRKYLDYSAYEAMRNLHRQIRSEVSKKGMADNIKLGAGGIREVEFI AQIFQMIRGGQMRALQLKGTQETLKKLAELGIMPSENVETLLAAYRFLRDVEHRLQYWDD QQTQTLPSSPEQQQLLAESMGFDSYAAFSDDLNVHRNKVNQLFNEILSEPEEQTQDNSEW QWAWQEKPDEEERQGRLKEHGFDAETIAARLDQIRNGHKYRHLSAHAQPRFDAIVPLFVQ AAAAQTNPTDTLMRLFDFLENISRRSAYLAFLNEHPQTLAQLAEIMSQSSWVAAYLSKYP ILLDELISAQLLDTAFDWQALAAALSDDLKACGGDTEAQMDTLRRFQHAQVFRLAVQDLA GLWTVESLSDQLSALADTILAAALPCAWADMPKKHRDTPQFAIVGYGKLGGKELGYASDL DLVYLYDDPHPDAGDVYSRLARRLTNWLSAATGAGSLYETDLRLRPNGDAGFLAHSIAAF EKYQRENAWTWEHQSLTRARFICGTPEIQTAFDRIRTEILTAERDQTALAGEIIEMREKM FPTHPPVDSNVKYARGGVVDVEFIVQYLILAHARQYPQLLDNYGNIALLNIAADCGLIDK TLAEQSRTAYRFYRQQQHNTKLRDAEKTEVTDELLAHYGNVRKLWKEVFGKEAKLG >gi|257257229|gb|ACDX02000014.1| GENE 41 41374 - 42255 823 293 aa, chain - ## HITS:1 COG:NMB1801 KEGG:ns NR:ns ## COG: NMB1801 COG1560 # Protein_GI_number: 15677639 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lauroyl/myristoyl acyltransferase # Organism: Neisseria meningitidis MC58 # 1 283 16 298 298 414 73.0 1e-116 MYILITFFFKLFAAMPLRLLHALAGVLGGVVYYLRCEDRERVFDNMRTAGLQSDEAAVKA VFRETVKGGLELPVAFFRRPESIEKLFVEVRGWEHVQAALDAGEGLLFITPHIGSYDLAG RYISQQLPFPLTAMYKPPKLKAMDEVMQAGRVRGKGKTAPTSIQGVKQVIKALRAGEATI VLPDHVPAPEEGGDGVWAEFFGKPAFTMTLAGKLAQVKGVKALFFCGERLPKGRGFVLHI EPLRGELNGDKEHDARIINENTEYWIRRFPTQYLFMYNRYKQPAGAPDPPGHG >gi|257257229|gb|ACDX02000014.1| GENE 42 42821 - 43102 428 93 aa, chain + ## HITS:1 COG:NMB0398 KEGG:ns NR:ns ## COG: NMB0398 COG0640 # Protein_GI_number: 15676312 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Neisseria meningitidis MC58 # 1 93 1 93 93 111 72.0 3e-25 METKRLSSLLKLIANPERMAILFMLMDSERSIAELSEALGQPATAVSNHLARLRSEGLID FTRYHRIIEYRLVSEEAAAILNTLRHLENRKAA >gi|257257229|gb|ACDX02000014.1| GENE 43 43292 - 44062 1254 256 aa, chain + ## HITS:1 COG:NMB0399 KEGG:ns NR:ns ## COG: NMB0399 COG0708 # Protein_GI_number: 15676313 # Func_class: L Replication, recombination and repair # Function: Exonuclease III # Organism: Neisseria meningitidis MC58 # 1 255 1 255 256 481 90.0 1e-136 MKITTWNVNSLNVRLPQVQNWLADHQPDVLVLQELKLDQDKFPAAALQMMGWHSVWSGQK TYNGVAIISRSEPQDVQVGLPALPDDPQRRVIAATVNGVRVINVYCVNGEALDSPKFQYK EQWFAALTEFVRDEMTRHEKLVLLGDFNIAPADADCYDPEKWHEKIHCSSIERQWFKNLL DLGLTDSLRQIHPEGAFYTWFDYRGAMFQRKLGLRIDHQLISPALSAVLKDVYVDLDARA QERPSDHAPVVAEFDL >gi|257257229|gb|ACDX02000014.1| GENE 44 44380 - 45243 245 287 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|152985719|ref|YP_001348948.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas aeruginosa PA7] # 7 267 1 275 304 99 33 7e-20 MDNEMEMNERRMMTLDDWIRQSPLPRIEARMLLQKAGGYSRVQLITQGVEAIPADIFARL DSLAERRLNGEPIAYIIGGREFYGRWFEVCPDVLIPRPETEHLVEAVIEHLPKNGRVWDL GTGSGAVAVTVALERKDAEVRASDISRQALVVARRNAENLGAAVEFASGSWFDTDKTSSE DKYRFDVIVSNPPYIEADDSHLNQGDLRFEPQTALTDFADGLTCIRELAQRAPEFLKEGG WLLLEHGYNQGGAVRQILSENGFTEIETRQDLAGLDRLTLGVRRHIE >gi|257257229|gb|ACDX02000014.1| GENE 45 45930 - 46289 256 119 aa, chain - ## HITS:1 COG:NMA2006 KEGG:ns NR:ns ## COG: NMA2006 COG2018 # Protein_GI_number: 15794886 # Func_class: R General function prediction only # Function: Uncharacterized distant relative of homeotic protein bithoraxoid # Organism: Neisseria meningitidis Z2491 # 1 119 1 119 119 164 81.0 3e-41 MQQLLISVLSDLNNTSPDITASAVISTDGLPIATMLPSHLNADRVGAMSATLLALGNRSV HELACGELDQVMVKGKTGYILLSQAGENAVLALMARESGKLGLILLDAKRAAKHIAEIL >gi|257257229|gb|ACDX02000014.1| GENE 46 46329 - 46970 298 213 aa, chain - ## HITS:1 COG:no KEGG:NLA_5110 NR:ns ## KEGG: NLA_5110 # Name: not_defined # Def: hypothetical protein # Organism: N.lactamica # Pathway: not_defined # 1 213 1 213 214 336 77.0 5e-91 MESTLSLQSNLYPKVTPAGAYYAVTSETPSASRTLLYSLLKASPTEVISSEKILAWADTS DIDTALNLLYRLQRLEFLYGDENASNEDIHLTDEQLPSVLEQLSSSGKALLADENGLYFA NANFHHEAAEELGLLASEVTKMDSSHRLLIRNNLHINNNAWGICDPSGQSELTFFPLYIG NTKLILVIGGMPDLNKEAFVTLVKVLYHRYGSR >gi|257257229|gb|ACDX02000014.1| GENE 47 46976 - 47512 534 178 aa, chain - ## HITS:1 COG:NMA2008 KEGG:ns NR:ns ## COG: NMA2008 COG2229 # Protein_GI_number: 15794888 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Neisseria meningitidis Z2491 # 1 178 1 178 178 301 84.0 4e-82 MKENKIIFTGPVGVGKTTAISALSDEPPVQTDASASDMTLVRKGYTTVAMDYGVIHLDEE VKVHLYGTPGQERFNFMWEILSQGSMGLVLLLDNTRTNPLKDLQFFLEAFRELLKKAPLV VGVTKMDIRSLPSVDVYQKYLAQNNFNVPVFEIDARREDDVKQLVSAMLFSIDPGLEV >gi|257257229|gb|ACDX02000014.1| GENE 48 47525 - 48619 618 364 aa, chain - ## HITS:1 COG:no KEGG:NLA_5090 NR:ns ## KEGG: NLA_5090 # Name: not_defined # Def: hypothetical protein # Organism: N.lactamica # Pathway: not_defined # 1 362 1 364 365 447 62.0 1e-124 MDNLLPKIKTIRVMLRDMNEQQEAVFRMAFKMHNTTNYQIIGTDSVEKPDLVLVDTDTAD GIETWKTLKIEYSDIPVAMFSSQEPSVETPYLPKPVKFDTLFPVLRSLAQGGNVFNPADS ETAEQNTQGNGGAEGGRKATIKRFNPNKGLLGALKFASQGHQDIAVLHEGKPVLIVFPSI QRVLLTVNAHDLESLCKDDNLSVVCKVVPDNPQWKEKAKVTIMSCLWQMAIWTAQGRLIY PMTPQTIFTLKRWPNLTRLAPVPESMRLSAFLTKTSVNLNILYKVMPLEMPDILNYLAAT SVTGFLATDTEYAHNQTNVSEQVDVNSNVPDSQMVKDAEKIAGPSQEQPRGLLQRLMRKL LGKR >gi|257257229|gb|ACDX02000014.1| GENE 49 48644 - 50089 610 481 aa, chain - ## HITS:1 COG:no KEGG:NMA2010 NR:ns ## KEGG: NMA2010 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_A # Pathway: not_defined # 16 481 1 457 463 491 57.0 1e-137 MDYSLLIVLLALLLVVLLFVRFKQSGTTHKKTTKVAKSSIHHNKPNQKDEDAVTPDWMDQ VNQSVSDTEQQDWEWGGGETSGSTASVSAQEVDPLTEYQVYKQFGYESKAAESLAGYLNG LGDGAPEKLVHELIGLSLRVGNVDMLADALEKHGLVLSEESLAEYVKVGLMTEPTHLRLR VLAEERLGWSLQEIERRIGESSGIEDSSESDSTSSDDVQHTSPTSQASKRSLIVLGKKEF NDITPEEMGAVIGFVKPEHGAKILKDKVDYKTAVQQYNRAIQTSPKPASLIIDALKLDYQ NEEIGQFAQHLWKLYHSLGQYGRQVKERMLGWGYSLGYHEVFDDLEKGPNENRVKEIGLA RGYLQPTSLQMKAKYRDLVQKDSSVISMNSSPADEALKEVESLLMYGQLDLAVDTLEQAV LQYPQESQLYIMLFDLYERVEDWARLEQFLRILRERVVSLPEEVILAMSRLLQRVNQYSK K >gi|257257229|gb|ACDX02000014.1| GENE 50 50241 - 51281 280 346 aa, chain - ## HITS:1 COG:RSc1209 KEGG:ns NR:ns ## COG: RSc1209 COG2265 # Protein_GI_number: 17545928 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Ralstonia solanacearum # 1 341 102 448 450 268 43.0 1e-71 MEEQLERIGKIRPEQILPAIYGTPWHYRDRARLSISKDAGGRLKIGFKAKKSHEVIDVDS CMVLPAHISEKLPKIKQMLQSLIDLDLLFIEFFNSEKLTVLNICSRKKPPSQKLRQLEKW FDTILGCEKKQWQIWLQAGRQEAQPFYPKDCQPLGYALPEFEVEMPYKPGDFTQINAGLN GVMVGRALKLLDIQKNERIADLFCGLGNFSIPMAKSGAEVVGIEGEGSLVERARNNASAN GCFDRVSFSEADLFETDETVLASWGQFDKMLLDPPRSGAYAVVKSLHAPYLPVKIVYVSC NPATFARDAEVLVNKGYRLKFVGVMNMFAQTSHVESIGVFDLENGI >gi|257257229|gb|ACDX02000014.1| GENE 51 51713 - 52711 858 332 aa, chain + ## HITS:1 COG:NMA2014 KEGG:ns NR:ns ## COG: NMA2014 COG1376 # Protein_GI_number: 15794894 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 332 15 344 358 388 62.0 1e-108 MKKILFSTSLAALTAYATANTPVPDVSPVSQGQHVVINIPQQRLFLYTDGQLTKIYPVAV GKAMTQTNLGEHKIGAKAFNPTWHIPKSIQKERGDGVKSVPPGPNNPLGPVFVRLGDPKF SLGIHGTNAPASVPGVRSHGCVRMKSPDALEFAKTIATGAPASVIYQLASLNEDANKNLW LAAYRDPYNKKNLDTDALKKSIAAWAKAHGKTINATRIDAILKARTGAANCLTCAKGVKL RTPLKSLAWMSGSSAFSKPKVMPKPAPVKDEVLPAGSEIEIDAEDTPTPKAASEYSPRKP KAAEYTPPPAASTPSYPKYDLPADGDPTSLLF >gi|257257229|gb|ACDX02000014.1| GENE 52 52996 - 54039 769 347 aa, chain + ## HITS:1 COG:NMB1787 KEGG:ns NR:ns ## COG: NMB1787 COG0002 # Protein_GI_number: 15677627 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate semialdehyde dehydrogenase # Organism: Neisseria meningitidis MC58 # 1 347 1 347 347 583 76.0 1e-166 MNSKIKVGIVGATGYTGVELLRLLSSHPNIEITTVTSRSESGKAVSDYFPSLRGIYDLTF QTPEHAGLEKCDIVFFATPNGIAMNDAPRLLEKGIRIVDLSADFRIQNISTWEHWYKMKH VSPDIVPQAVYGLSELNRDAIASAQIVANPGCYPTCVSLPLLPLLKEGRLKPHMPLIADC KSGVSGAGRKANIGSLLCEAGDNFKAYGIAGHRHQPEIQQTIATLQPEIAKHFIFVPHLT PMIRGMHATLYLHLEDGCNPEAVLREFYRDSPFVDIMPAGSTPETRSVRGANLCRVSIQK SSSDNVWIALSVIDNLVKGAAGQAVQNMNIMFGFDEKLGLIQTPLLP >gi|257257229|gb|ACDX02000014.1| GENE 53 54138 - 55217 488 359 aa, chain - ## HITS:1 COG:NMB1814 KEGG:ns NR:ns ## COG: NMB1814 COG0337 # Protein_GI_number: 15677650 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate synthetase # Organism: Neisseria meningitidis MC58 # 1 359 1 359 359 596 82.0 1e-170 MRTLTVQTPSHQYPIFIGYDLIGQADSLLKPYLNKTAAIITNETVAPLYLKSLQMSLDRI GIRHFSIILPDGEKYKNWQTLNLIFDGLMENRAERKTTLIALGGGVIGDMVGFAAATYQR GAPFIQIPTTLLSQVDSSVGGKTGINHPLGKNMIGAFYQPQAVLADLETLKTLPRRELSA GMAEVIKYGALGDVDFFEWLEQNIADLMVQNQEKLTQAVYHCCKMKADIVAKDETEQGIR AWLNLGHTFGHAIEAEMGYGVWLHGEAVAAGCVLAGRLSEALGKISDADTRRIAVLMEAA GLPSLPPKFPFEKWISHMSHDKKVSSGVMRFIGLNRLGEANITEVSDIDILKRTLQPYL >gi|257257229|gb|ACDX02000014.1| GENE 54 55413 - 55790 209 125 aa, chain - ## HITS:1 COG:NMA0648 KEGG:ns NR:ns ## COG: NMA0648 COG0703 # Protein_GI_number: 15793634 # Func_class: E Amino acid transport and metabolism # Function: Shikimate kinase # Organism: Neisseria meningitidis Z2491 # 1 115 54 168 170 143 63.0 9e-35 MEGEEGFRHRETLMLKKLSALNGIVLSTGGGSVLREENRRFLREHGTVVYLHALPEVLLE RTRYDSSRPLLKTDDPLKKLRGLYTVRDPIYRETAHIVIESESCAKTLRKLVECLDERQF IEYDD >gi|257257229|gb|ACDX02000014.1| GENE 55 56495 - 58630 1035 711 aa, chain - ## HITS:1 COG:NMA0650 KEGG:ns NR:ns ## COG: NMA0650 COG4796 # Protein_GI_number: 15793635 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component HofQ # Organism: Neisseria meningitidis Z2491 # 146 711 208 761 761 683 66.0 0 MKTKNMTKLFAGISMIAAAQIALAGNITDINVSTLPDSQKIIKIRFDRDVISPSGFVTST PSRIALDFAKTNIQLAQPVLEYADPLLNQITAAQNNDRSRIVLGLNKAAQYNTEVHGNEV WVFVTESSDRTITSAAISNNGNAHQKVSSSETVKQTVNSANIDFRKGAHNSGIVELNAPA FTGKPEVKQQRDRVIITLKNYPLPTQAQRSLDVADFSTPVKNITLKRIGNDAQLIIRNNG NWDFNTKAANGQFAFEVMPKSASTESSGLNANPNKSFRGRKISLDFQDVEVRTILQILAK ESGVNIVASDSVNGKMTLSLKDVPWDQALDLVMQARNLDMRRQGNIINIAPRDELLAKDK AFLQAEKEIAELGPLYSQTFQLKYKNVEEFRKILRLDDNNSGNSNGRNTLLSGRGSALID PATNTLIITDNRNVVEKFRKLIEELDVPTRQVMVEARIVEAKDGFSRDLGVKFGVAGSKG RNAWGNSWSNAQDNHNTNSAVLRGDANYPTWSLQPNISLPAAAATNNIALVRALSSGALG LEISASEATGKSKTISNPRVLTQDRREATIESGTEIPYQEASSSGATSVSFKKAVLGLTV TPNVTPDGQVIMTVKITKDTPQDCTVDSLITKCIQTKNLNTQAMVEDGGTLIVGGIYEED NSDTINKVPLLGDLPVVGNLFKSRAKKEERRELLVFITPRIMDGVGSNLRY >gi|257257229|gb|ACDX02000014.1| GENE 56 58649 - 59203 367 184 aa, chain - ## HITS:1 COG:NMA0651 KEGG:ns NR:ns ## COG: NMA0651 COG3168 # Protein_GI_number: 15793636 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein PilP # Organism: Neisseria meningitidis Z2491 # 7 171 6 170 181 201 58.0 5e-52 MKNKIFLLTSILSLTGCTPAYDDLNEWMTKTRQDAKSHIIPFEAPVVNPPAVYNPPAYSG LNAFDFRRLDNAPKGNNAPNPNRPKEALEAFSLENMRYVGMLSNGSKTAGFIDVNGHVYT VYPGNYIGQNYGKIQSITEDLIVLTELVEDSSGNWIYRKAELSLSNNAENSSNDVGNASA TNSN >gi|257257229|gb|ACDX02000014.1| GENE 57 59221 - 59907 309 228 aa, chain - ## HITS:1 COG:NMA0652 KEGG:ns NR:ns ## COG: NMA0652 COG3167 # Protein_GI_number: 15793637 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein PilO # Organism: Neisseria meningitidis Z2491 # 21 198 22 199 215 216 66.0 2e-56 MASAKVKNLDIQNLYLLNPAAKFVLAALAVAGVLAVGYGIVFRDQLETLSTQEAKEAELK ETYTKKSIEAASLDNLKAELASIRSSFDILLKQLPTDAEIPTLIQELHQAGSANGLRLDS VVPQVPVNDGPIQKLPYEISITGKYNQINQFARDVGGLSRIITLESLKISHVSDSKNSKD SKNDILTLRAIATTYKARPADEVAAELAAQQSQAQGDSENGQANSEQK >gi|257257229|gb|ACDX02000014.1| GENE 58 59908 - 60522 381 204 aa, chain - ## HITS:1 COG:NMA0653 KEGG:ns NR:ns ## COG: NMA0653 COG3166 # Protein_GI_number: 15793638 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein PilN # Organism: Neisseria meningitidis Z2491 # 1 177 1 177 199 178 56.0 5e-45 MTELIKINLLPYREEIKQRKRQQFKILMLSSLLIGVGLSAIAYLAINNAISDQESRNTFL EAEITKLDNDLGEIKKLQQEKENFLAKKQKVEELQEKRSQAAYIIDSLNVVIPDNTYITS LDAENPTSYKITGRAISDNKIAMFMRSLPSTGIFTQPELLEIKKIDNYQEFNIKSMIGSA SIPVKSEREAINDDPTKAQNGEEK >gi|257257229|gb|ACDX02000014.1| GENE 59 60524 - 61633 523 369 aa, chain - ## HITS:1 COG:NMB1808 KEGG:ns NR:ns ## COG: NMB1808 COG4972 # Protein_GI_number: 15677646 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, ATPase PilM # Organism: Neisseria meningitidis MC58 # 6 369 8 371 371 419 62.0 1e-117 MIGLSKNPKNTTSKAGKSSSGLSNRSAIGIDISQHAIKMVQLSGRSLNQIQLEKYVITKL PKNIVKGNKIQDYDQLVTYLQHAYSQLRSSCKNIIAAIPQGLATIEQVVYSQKDTELDLD EFAESEISSIGPIDEINYDYQVVGASVIPAGQQILTVAARKDDVEPMIEMFEGAGLSLSA LDLDLLAQRNAFVFWINQYAPELTNEKVAIFGIYATQMYALIIQNGQILYKQEMPVSTEQ LNQLIQRTYQVTEEKAAQMMVSTSKPTDYQAQIADRFNVQVAQEVQRVLQFYYTTQPTDA FSNVKHILLTGSASQQTGLAESIFSQTNTATQCIQPVTYVERGGKVDLSQLQVDASALTL AFGLALRGL >gi|257257229|gb|ACDX02000014.1| GENE 60 61816 - 64179 1085 787 aa, chain + ## HITS:1 COG:NMA0655 KEGG:ns NR:ns ## COG: NMA0655 COG5009 # Protein_GI_number: 15793640 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase/penicillin-binding protein # Organism: Neisseria meningitidis Z2491 # 1 787 13 798 798 1288 81.0 0 MLGLAIFTTGLIAIAILVTYPKLPPLDSLQHYQPKMPLTIYSADGQIIGVYGEQRREFTK INDFPHILKNAVIAAEDKRFYEHWGVDVWGIARAAISNIVAGGVQSGASTITQQVAKNFY LSSERTFTRKFNEALLAYKIEQSLSKDKILELYFNQIYLGQRAYGFASAAQIYFNKNVKD LTLAEAAMLAGLPKAPSAYNPIVNPERAKLRQTYILNNMLEEGMITSQQRDDALKEELHY ERFVQKIDQNALYVAEMVRQELYEKYGEEAYTQGFHVYTTVNTENQRVATEALRKVLRNF DRGSSYRGAENYIDLSKTDDVEETVSQYLSTLYTVDKMVPAVVLEASRKAVQIQLPNGRK ITLDTKSLGFAAKAVNNEKMGEDRIRRGSVIRVKNIGNGWTVVQEPLLQGALVSLDAKTG AVQALVGGYDYHSKTFNRATQAMRQPGSTFKPFVYSAALAKGMTASTMINDAPISLPGKG ANGGVWSPKNSDGRYSGYITLRQALTASKNMVSIRILMSIGIGYTQQYAQRFGFKPSELP TSLSMALGTGETTPLRIAEAYSVFANGGYKISAYVIDKIYDSQGRLKAQMQPLVAGENAP QAIDPRNAYIMYKIMQDVVRAGTARGATALGRSDIAGKTGTTNDNKDAWFVGFNPKVVTA VYVGFDKPRSMGRAGYGGTIAVPVWVDYMRYALKGTEIKGMKAPEGIVSNGGEYYMKERL TTSSDLALENGGVAPRPIPQSSRRTRQPSDDNVSDAQNSNRPGRQELQEEPVVPSNTGNN KQLDSLF >gi|257257229|gb|ACDX02000014.1| GENE 61 64826 - 66274 351 482 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 [Campylobacter concisus 13826] # 12 466 8 459 460 139 25 3e-32 MKANPYKQGICIATAILLSACAQFGKQAPLEEPTNYGLSEGRSAAIVQDAWWMQLNDQKL NQLVALSIRNAPDLRIAKARFEQAQAQLGITEAASKMQIGLSARGAGAYVAPKPPSGHID TDHTLLLANTALQGTWSFDFWGKNRKQAASILGKRKAILYEAHQTRIDIANAVASQYFTW QMLLIQQNLLSERIETVDKMQQLMRRRINARLASAESLYPVEMQQQSMQLEKLELERRIA KVRHALAILSGTTPDGLSLYMPEKMAAVPVVPVNKIHADLLGARPDIAAQKAMLESRFNT VKATEAEFYPNIELKVLAGLAHIDAFNVVRGRTSGMIGVLPALNLPIFTSGALQSKLAGR RAEYNEQVALYDRTVLNAMRAAADAVVDYQNMQKRQSVWEKMQETAEKTVRNANSRVNAG LDNGLSALQKQNELLQLKMQKAQYQAESLIAWSNLNTQLGGGFKLEPLERNVSKKSTGKK VR >gi|257257229|gb|ACDX02000014.1| GENE 62 66325 - 66819 414 164 aa, chain - ## HITS:1 COG:STM2813 KEGG:ns NR:ns ## COG: STM2813 COG1846 # Protein_GI_number: 16766124 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 163 1 163 176 90 34.0 1e-18 MSFSQTDLTTALKTLSDRLPQFSEQQTRAGRMLRVVTERLSSHLNDNLKVYGINENLWFA LMAVYVSPNSEILPSRLSDLMDLTRTSATRLSDEMVSRGWVARYINQQDRRQIVLKLTPE GEVFIQKVWPQVSSTSQEAWKDFTDEDYNQLQYLLGKLLRRLEG >gi|257257229|gb|ACDX02000014.1| GENE 63 67330 - 67803 380 157 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148994988|ref|ZP_01823966.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae SP9-BS68] # 57 155 7 105 114 150 68 2e-35 MSRNTEELQGISLLGNQKTQYPTGYAPEILEAFDNKHPDNDYFVKFVCPEFTSLCPMTGQ PDFATIYIRYIPHIKMVESKSLKLYLFSFRNHGDFHEDCVNIIMKDLIALMDPKYIEVFG AFTPRGGIAIHPFANYGKAGTEFEALARKRLFEHDSQ >gi|257257229|gb|ACDX02000014.1| GENE 64 67879 - 68562 678 227 aa, chain + ## HITS:1 COG:NMA2171 KEGG:ns NR:ns ## COG: NMA2171 COG1738 # Protein_GI_number: 15795042 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 1 213 1 213 228 343 92.0 2e-94 MYEFTTAQQQKALFWLVLFHILIIAASNYLVQFPFQIFGIHTTWGAFSFPFIFLATDLTV RIFGSHLARRIIFWVMFPALLLSYIFSVLFHDGSWTGLGTLSQFNTFVGRIALASFAAYA LGQILDIFVFNKLRRLKAWWIAPTASTVIGNALDTLVFFAIAFYASSDEFMAANWQGIAF VDYLFKLTICTLFFLPAYGVILNILTKKLTALHPAPPTKQTVSLQEN >gi|257257229|gb|ACDX02000014.1| GENE 65 69017 - 70240 1291 407 aa, chain - ## HITS:1 COG:NMB0315 KEGG:ns NR:ns ## COG: NMB0315 COG0739 # Protein_GI_number: 15676232 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Neisseria meningitidis MC58 # 19 407 42 430 430 499 63.0 1e-141 MTAYAVTEPVPEYQGFKVERVSEELPAVYVETGNFQSSYWAQEVVQQGDSLADVLTRMGV PQTDIKQIMAKNSAERDMQHLRANQSVNIRIDASGQVTDVQFFTDEELERNLVALEKVKG KWQASTSEVDMKTMPTLRSVVVRTSARGAMAQAEIPVEIRESLSEIFSDLLSLEDLKEGD VIRLLYDSMYFRGQQMGTGNILAAEIIKGGKSHQAYYYSQGKGDEESGSYYDQSGKSLQQ KAGFNIEPVVYTRISSPFGYRVHPVLHTVRMHTGIDYAAPSGTPIKATADGVITFKGWKG GYGNTVMIRHSNGVETLYGHMSAFTPAQGTVRAGEVIGFVGTTGRSTGPHLHYEARVNSQ PVNPTTVALPTPKLTPTNMAAFRQQQKSANTILASVRGLPVSVAQLD >gi|257257229|gb|ACDX02000014.1| GENE 66 70629 - 71627 845 332 aa, chain + ## HITS:1 COG:NMA2173 KEGG:ns NR:ns ## COG: NMA2173 COG4255 # Protein_GI_number: 15795044 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 10 332 1 322 322 328 49.0 1e-89 MLFPNLPPAMNLTLAIPSLNRQSDESVPSLTLPAFNRLLRFGHLHKQAVETSEFYGRYLW DGSLLEHAKTAANVPQQQPTALASPLWQQMGLHQVSVVGGEYIGIATDEADELCRELSDF YQDEGWRFVPVRPDLWLVLLPNPQDWQIKPALDIYGQMGSSEQASGKDSGQWLAKQTEIQ MWLHQHPINNIRNQLGTPPINGLWLWHDIQGMQQSSPLFSDSPWAQFASGRIDAPYDFRA FASWMQETRTDTAVIFMDDLAVTGSTADVLTYQDILQDWEQRWFGPIWQALHTGRLKNLT LTTDGENGGALTLTPKSRWKFWRAEKTFTGIW >gi|257257229|gb|ACDX02000014.1| GENE 67 71828 - 77164 7044 1778 aa, chain - ## HITS:1 COG:XF1981 KEGG:ns NR:ns ## COG: XF1981 COG5295 # Protein_GI_number: 15838575 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Xylella fastidiosa 9a5c # 958 1778 318 1190 1190 152 28.0 7e-36 GNKITKVAKGAADTDAVNVSQLNPVAKALNTSIDPATGEVAEPNFTVNHADGTAGTPVHT VQDALNEVGKELNKGLNIAADKGTTDKVNLGETVTYTSKDKNIVTTVGSNEIDFSLADKI TVGKAGQNPVVIDGTNGTVSGLTNKTLGGTDFATSDKAATEAQLDATQVNLATILGGNAA NDKGNVTTNNIGGTGKDNVHEAIAAVKETADKGWNLKANDETDSEKIAAGDTVTVKQGKN IRVKRSGKDLTVETSDDVEFAHVKADSVEATSVVAESVIAGNSVLTTDGLKIGADSSPNQ VSLTTAGLNNGGNKIANVAKGTVDTDAVNVSQLNPIAKALNTSINLTTGAIEAPVFTVTK ADGTKHPAVGTVQDALDKVGEEVTKGLNIVADNGSSEKVNLGDTVKYTSKDKNIVTTSGT GKAIDFSLAEKVTIGKDAANGGKPVVIDGKEGIVSGLTNQALGGADFATKGQAATEEQLN ETQANLAKLLGGNAANDKGNVATNDIGGTGKDNVHDAIAAVKETADKGWNLKANDETDSE KIAAGDTVTLKQGKNIRVKRSGKELSIETSDDVEFGTVSATTVLADSFISGNSVLSGEGL KIGADGSPSQVSLTTAGLNNGGNKIANVAKGTAATDAVNVAQLNEQLAATEKTTTVVAGK NVTVSEKVDGNNTEYTVNADKTTLSQAAGGAVKVSEGTKDADGVTDYALDLTDEAKADIA KGVAAKDAVDNKGLTFAADNGTTGAKKLGDSLSVKGDGNILTRADENGIGFSLADKITVG KAGKGNKPLVIDGTAGLISGLSNTTLGGADFATKGQAASEEQLNAAQANLANLLGGNAAN NNGNVTTTDIGGTGKDNVHDAIAAVKETADKGWNLNANDETSSEKIGAGDTVTFKEGKNV KVSRNGKNITVATSDDVSFNKVTVGGSVLTDNGLTVGNGKAGKPVSLTKDGLDNGGNKVT NVAKGTADTDAVNVAQLKAAAAKATSKVDSGNDNIVVTPEQNADGSTTYKVATAPNLKAD SFTAGDTVVNKDGVKVGDKVALGKDGLKAGDVNITTDGINAGNKAISNVAAGVKDTDAAN VGQLNRLTAAAKTEVEAGTNIASVTSKKGANGQTVYTVNADGASVSAGSDNIVVTKGNKD ADNVTDYAVDLSKAVKADIAKGVAAKDAVDNKGISFAGDSGMTVANKLGDTVAVKGDVNI TTTAGANGIQVGLNKDLKVDSVKAGDTVVNNNGVNVGDKVALGKDGLKAGDVNITANGIN AGGKKVTGVAAGTVAAGSIDAVNGGQLHQVYELIGSNGGNVNTAPPAVEADGKAGLGNIK NITLVDNSNNPNVTNVTNETKIAQSNGYSLVTYNVEDQGMYVTNNVIEAVGRMNEQGIKF FHTNDGEVNPDVQARNSEDSSASGAYATAVGYQAASKGTNAIAIGKGAKANAENTIAIGT GNIVSGKNSGAIGDPTVVSGNSSYSIGNNNNVSADNAYALGSNIKATVKDSVYLGDRAQT QGIHTADAAKGEAYTYGGLNDKAVAGKAGSTAAANKVAGVVTVGNGTDETRQVQGVAAGV VSADSTDAINGSQLYYTNQAIANVATQATAAKTEVTAGKNVVVNQTTGNSGQTVYNVATT DKLDVTSVTAGGVTVNAQGVSIAAPTAHNPANTVSLSPIGLNNGGQRITNVAPAKEGTDA VNLNQLAGVGNALQNNIERVGKKAYAGVAGAIAQGSIPQVTRPGATGIGVGSGYYGGQSA MAIGVSAMSDGGNWVVKGNFSANTDGHVGVGAGALYQW Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:10:12 2011 Seq name: gi|257257227|gb|ACDX02000015.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont14.1, whole genome shotgun sequence Length of sequence - 65499 bp Number of predicted genes - 52, with homology - 52 Number of transcription units - 36, operones - 11 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 80 - 139 7.2 1 1 Tu 1 . + CDS 212 - 502 433 ## COG1555 DNA uptake protein and related DNA-binding proteins + Prom 588 - 647 2.8 2 2 Tu 1 . + CDS 677 - 1141 244 ## COG4968 Tfp pilus assembly protein PilE + Term 1150 - 1189 -1.0 - Term 1221 - 1269 13.0 3 3 Tu 1 . - CDS 1283 - 2596 2039 ## COG2252 Permeases - Prom 2629 - 2688 5.0 - Term 2768 - 2803 6.5 4 4 Tu 1 . - CDS 2830 - 5466 2820 ## NMC1969 putative adhesin/invasin - Prom 5709 - 5768 6.2 + Prom 6007 - 6066 4.2 5 5 Tu 1 . + CDS 6131 - 7063 1386 ## COG0679 Predicted permeases + Term 7267 - 7326 13.1 - Term 7328 - 7370 -0.8 6 6 Tu 1 . - CDS 7458 - 8741 2224 ## COG0001 Glutamate-1-semialdehyde aminotransferase - Prom 8773 - 8832 3.7 + Prom 8871 - 8930 8.9 7 7 Op 1 . + CDS 8955 - 9362 693 ## gi|261365366|ref|ZP_05978249.1| hypothetical protein NEIMUCOT_05788 + Term 9402 - 9454 15.1 8 7 Op 2 . + CDS 9564 - 10892 527 ## PROTEIN SUPPORTED gi|16079597|ref|NP_390421.1| hypothetical protein BSU25430 + Term 10913 - 10964 14.2 - Term 10899 - 10950 14.2 9 8 Tu 1 . - CDS 11130 - 13922 4265 ## COG0060 Isoleucyl-tRNA synthetase - Prom 13998 - 14057 8.9 + Prom 13982 - 14041 3.4 10 9 Tu 1 . + CDS 14197 - 14427 320 ## gi|261365369|ref|ZP_05978252.1| hemin transport protein HemS + Term 14520 - 14562 -0.8 + Prom 14429 - 14488 3.1 11 10 Tu 1 . + CDS 14617 - 15405 1174 ## COG4558 ABC-type hemin transport system, periplasmic component + Term 15438 - 15475 4.7 12 11 Op 1 35/0.000 + CDS 15739 - 16671 1343 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 13 11 Op 2 . + CDS 16673 - 17416 179 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 + Term 17476 - 17518 1.6 - Term 17871 - 17904 3.1 14 12 Op 1 4/0.000 - CDS 17928 - 18446 914 ## COG3265 Gluconate kinase - Prom 18618 - 18677 3.6 15 12 Op 2 . - CDS 18681 - 20066 1551 ## COG2610 H+/gluconate symporter and related permeases - Prom 20169 - 20228 5.8 - Term 20513 - 20562 13.6 16 13 Op 1 11/0.000 - CDS 20578 - 20892 264 ## PROTEIN SUPPORTED gi|88811874|ref|ZP_01127127.1| S30EA ribosomal protein 17 13 Op 2 17/0.000 - CDS 20959 - 22311 1998 ## COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog - Prom 22450 - 22509 4.8 - Term 22507 - 22538 3.4 18 13 Op 3 19/0.000 - CDS 22562 - 23296 281 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 19 13 Op 4 12/0.000 - CDS 23389 - 23919 881 ## COG1934 Uncharacterized protein conserved in bacteria 20 13 Op 5 11/0.000 - CDS 23900 - 24481 729 ## COG3117 Uncharacterized protein conserved in bacteria 21 13 Op 6 . - CDS 24478 - 25014 688 ## COG1778 Low specificity phosphatase (HAD superfamily) - Prom 25045 - 25104 5.7 22 14 Tu 1 . - CDS 25259 - 26197 1609 ## COG0583 Transcriptional regulator - Prom 26228 - 26287 4.2 + Prom 26270 - 26329 3.8 23 15 Tu 1 . + CDS 26392 - 27177 524 ## COG0327 Uncharacterized conserved protein + Prom 27198 - 27257 6.5 24 16 Op 1 28/0.000 + CDS 27300 - 27881 663 ## COG0723 Rieske Fe-S protein 25 16 Op 2 16/0.000 + CDS 27900 - 29249 1809 ## COG1290 Cytochrome b subunit of the bc complex 26 16 Op 3 . + CDS 29264 - 30049 775 ## COG2857 Cytochrome c1 + Term 30066 - 30103 6.2 - Term 30054 - 30089 5.0 27 17 Tu 1 . - CDS 30262 - 31029 1086 ## COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 - Prom 31056 - 31115 4.4 + Prom 31163 - 31222 5.0 28 18 Op 1 11/0.000 + CDS 31462 - 32436 1055 ## COG4606 ABC-type enterochelin transport system, permease component 29 18 Op 2 . + CDS 32426 - 33424 794 ## COG4605 ABC-type enterochelin transport system, permease component + Prom 33448 - 33507 3.1 30 19 Tu 1 . + CDS 33585 - 35450 1478 ## COG1835 Predicted acyltransferases + Term 35458 - 35499 8.0 31 20 Op 1 . + CDS 35509 - 36132 993 ## NMB1992 hypothetical protein 32 20 Op 2 . + CDS 36205 - 36963 228 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 36980 - 37018 9.5 33 21 Tu 1 . + CDS 37406 - 37633 92 ## NMC0437 putative lipoprotein - Term 37644 - 37675 -0.7 34 22 Tu 1 . - CDS 37833 - 38876 1253 ## COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) - Prom 38908 - 38967 3.4 + Prom 38827 - 38886 3.9 35 23 Tu 1 . + CDS 39055 - 40134 1508 ## COG0489 ATPases involved in chromosome partitioning + Term 40144 - 40190 6.1 + TRNA 40305 - 40380 91.3 # Lys TTT 0 0 - Term 40590 - 40640 17.0 36 24 Op 1 . - CDS 40663 - 41856 1984 ## COG1448 Aspartate/tyrosine/aromatic aminotransferase - Prom 41896 - 41955 4.5 37 24 Op 2 . - CDS 41960 - 42376 664 ## COG1238 Predicted membrane protein - Prom 42412 - 42471 4.2 + Prom 42402 - 42461 5.0 38 25 Tu 1 . + CDS 42633 - 43856 1466 ## COG0738 Fucose permease + Term 43874 - 43925 17.1 + Prom 43939 - 43998 4.0 39 26 Tu 1 . + CDS 44192 - 44815 832 ## COG1075 Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold + Term 44847 - 44909 18.1 - Term 44841 - 44891 12.3 40 27 Tu 1 . - CDS 44931 - 45533 939 ## COG0655 Multimeric flavodoxin WrbA - Prom 45659 - 45718 5.5 + Prom 45589 - 45648 7.1 41 28 Op 1 . + CDS 45669 - 46901 758 ## COG1295 Predicted membrane protein + Term 46922 - 46961 9.3 + Prom 46909 - 46968 4.5 42 28 Op 2 . + CDS 46995 - 48770 2378 ## COG4166 ABC-type oligopeptide transport system, periplasmic component + Term 48852 - 48912 -0.5 43 29 Tu 1 . - CDS 49808 - 50623 1515 ## COG2819 Predicted hydrolase of the alpha/beta superfamily - Prom 50721 - 50780 1.8 - Term 50724 - 50766 1.1 44 30 Tu 1 . - CDS 50849 - 52999 2758 ## COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid - Prom 53030 - 53089 4.5 - Term 53102 - 53148 14.4 45 31 Op 1 4/0.000 - CDS 53167 - 54498 2037 ## COG0477 Permeases of the major facilitator superfamily 46 31 Op 2 . - CDS 54718 - 55755 1158 ## COG1609 Transcriptional regulators - Prom 55824 - 55883 4.4 + Prom 55940 - 55999 6.3 47 32 Tu 1 . + CDS 56053 - 57681 2312 ## COG0166 Glucose-6-phosphate isomerase + Term 57694 - 57754 10.7 - Term 58020 - 58067 7.2 48 33 Op 1 . - CDS 58105 - 59451 2019 ## COG0038 Chloride channel protein EriC - Prom 59513 - 59572 3.0 49 33 Op 2 . - CDS 59656 - 62358 3901 ## COG2352 Phosphoenolpyruvate carboxylase - Prom 62382 - 62441 4.1 + Prom 62531 - 62590 2.5 50 34 Tu 1 . + CDS 62621 - 63097 753 ## COG0315 Molybdenum cofactor biosynthesis enzyme + Term 63113 - 63161 10.1 + Prom 63341 - 63400 9.8 51 35 Tu 1 . + CDS 63523 - 64935 1455 ## COG3182 Uncharacterized iron-regulated membrane protein + Term 65075 - 65115 7.3 - Term 64923 - 64961 -1.0 52 36 Tu 1 . - CDS 65058 - 65471 275 ## COG2801 Transposase and inactivated derivatives Predicted protein(s) >gi|257257227|gb|ACDX02000015.1| GENE 1 212 - 502 433 96 aa, chain + ## HITS:1 COG:NMB1657 KEGG:ns NR:ns ## COG: NMB1657 COG1555 # Protein_GI_number: 15677506 # Func_class: L Replication, recombination and repair # Function: DNA uptake protein and related DNA-binding proteins # Organism: Neisseria meningitidis MC58 # 1 82 107 188 205 95 60.0 3e-20 MKKFLFAALSVLTASLSLAAVNINTASPSELEALPGIGPAKAKAIADYRQQHGAFKSVEE LKNVKGIGEGIFSKLKAEATVAPAPANTKAKNVVQK >gi|257257227|gb|ACDX02000015.1| GENE 2 677 - 1141 244 154 aa, chain + ## HITS:1 COG:NMA0424 KEGG:ns NR:ns ## COG: NMA0424 COG4968 # Protein_GI_number: 15793429 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein PilE # Organism: Neisseria meningitidis Z2491 # 7 153 5 149 149 161 52.0 5e-40 MNKENCKGYSLTQLIFVIAIIGILTAIAYPSYQKYLRDSEMRQALAALVESAQFMERFYQ QNGSFKKTSTAWPDLPNSRSLENFCIYPHGLARGALDGKFTLKAVALDKNKEPRVIKINE SLTTFICESTASSCDDVTKNYFSGADKNCSVYRL >gi|257257227|gb|ACDX02000015.1| GENE 3 1283 - 2596 2039 437 aa, chain - ## HITS:1 COG:NMB0428 KEGG:ns NR:ns ## COG: NMB0428 COG2252 # Protein_GI_number: 15676340 # Func_class: R General function prediction only # Function: Permeases # Organism: Neisseria meningitidis MC58 # 1 436 1 436 436 661 88.0 0 MTTSNQNVLERIFNLRANGTNVRTELMAGLTTFLAMCYIIIVNPLILGETGMDMGAVFVA TCIASAIGCFVMGFVGNYPIALAPGMGLNAYFTFAVVKGMGVPWQVALGAVFVSGIIFIL FSFFKVREMLVNALPMGLKMSIAAGIGLFLSLIALKGSGIIVASDATLVKLGDIHQPAAL LVLAGFAMVVALGHFRVKGAIILTILTITAISTLLGLSEFKGVIGEIPSIAPTFMQMDFN GLFTLSMVSVIFVFFLVDLFDSTGTLVGVSHRAGLLEDGKLPRLKRALFADSTAIVAGAA LGTSSTTPYVESAAGVSAGGRTGLTAVTVGVLMLACLIFSPLVQSIPGFATAPALLYVGA QMLRSAREIDWDDMTEAAPAFLTIVFMPFTYSIADGIAFGFISYAVIKLLCNRVKDVPPM VWIVAVLWALKFWYLGG >gi|257257227|gb|ACDX02000015.1| GENE 4 2830 - 5466 2820 878 aa, chain - ## HITS:1 COG:no KEGG:NMC1969 NR:ns ## KEGG: NMC1969 # Name: not_defined # Def: putative adhesin/invasin # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 530 878 63 398 398 138 36.0 1e-30 MKKFNVKVLSMAVTAAVASGTAGAAGEDLGNVFPKNYQGIAAFHTVFGEGTTYDKDTGKL TFKKDSDALLLKTMELEQTINGFASGSDFITTDANGNKTVRKATNEDIEADSLKGVGLAG GLTAVNARVNDVNARVDDVNARVDDLLDDTAAALDEQEKAIEKLNNATKTNIDQITKITE GVNTLNTSVAKMVEDISTKFDEVDSEISKASSELSESIEKVSEDVTAVNTRVDSLAQDAA DAKAAAKAAEDKVTELSANVDSKVKEAKDAADKAKDAADKAVDAASKIDAVADKADKASK GVAGLTKALEKVAEQSALAAAENAQALNGFKENDEIVVTDKNGIKSVKTATTEDVEQDEF GGLGLKEVAAKHDQSLADLTAETERAKKAAEQAALAAIENAQELNGFKDGDEIVETDDDG VKSTRKATQADVDADGFGGLGLKEVVAAHDEALGDLTETVNENSEALVKTAEVVNAISAD VNANKAAIETNKTAIATKADKADVDKLVEYTADMGKKVNDIGDAVTELGDSTKEAIAAVE KDIDANKQDIVGLTKGLGLAAEAVEDNRKEIDANKAAIETNKTAIATKADKADVDKLVEY TADMGKKVNDIGDEVTALSDATSAAITRQDKDIVDLAKGLQLAAEAVEDNRKEIDANKAA IAENTAKLEEQKEANKAHRTDIDANKAAIETKADKTAVESVRTIAVEAQKSAQVAKGAVE VAQKSAETADSHAKAAQTAAAKAQESADTNAVQIAANTKQIDTNKTDIAALQTANGQHAA GIAKNSARIDSLDKNVANLRKETRQGLAAQAALSGLFQPYSVGKFNVTAALGGFKSDTAV AVGAGYRFNENFAAKAGLAVGTSSGGSASYNVGLNYEW >gi|257257227|gb|ACDX02000015.1| GENE 5 6131 - 7063 1386 310 aa, chain + ## HITS:1 COG:CAC2949 KEGG:ns NR:ns ## COG: CAC2949 COG0679 # Protein_GI_number: 15896202 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Clostridium acetobutylicum # 102 305 103 303 305 91 32.0 2e-18 METALLLAGKITELTLIVLMGMALVKFKLLNSEHSRTLSVIALYLISPSVMIHAFQIGNA PDIIDGLKLSVALAVVFHILLIALGRLFKTLFKLDTLEHAATVYTNSGNLIIPLVMSIFG PQWVIYTSGFIIVQMFLFWTHLRLLLCGRGNLAWKTVLTNINILSIFIGVFMFAFQIKLP HIIDNTLATVGSMIGPVAMLVAGMLIASLPLKEIVLSKRIYLVALLRLILIPLILLVFVK FSGIAHLGGHSDTVVLISFLATVSPAASTVTQMAMVYGQNARKASAIYGITTLLCVITMP LMIALYQAMV >gi|257257227|gb|ACDX02000015.1| GENE 6 7458 - 8741 2224 427 aa, chain - ## HITS:1 COG:NMB1864 KEGG:ns NR:ns ## COG: NMB1864 COG0001 # Protein_GI_number: 15677699 # Func_class: H Coenzyme transport and metabolism # Function: Glutamate-1-semialdehyde aminotransferase # Organism: Neisseria meningitidis MC58 # 1 427 1 427 427 760 92.0 0 MNRNETLFDRAKAIIPGGVNSPVRAFGSVGGVPRFIKKAEGAYVWDENGTRYTDYVGSWG PAIVGHAHPEVIEAVREAALGGLSFGAPTEGEIVIAEEIAKIMPSVERLRLVSSGTEATM TAIRLARGFTGRDKIIKFEGCYHGHSDSLLVKAGSGLLTFGNPSSAGVPADFTKHTLVLE YNNIAQLEEAFARNGDEIACVILEPFVGNMNLVRPTEAFVKALRELTEKHGAVLIYDEVM TGFRVALGGAQSLHGITPDLTTMGKVIGGGMPLAAFGGRKDIMECISPLGGVYQAGTLSG NPIAVAAGLKTLEIIQREGFYENLTALTRRLADGLAAAAKAHGIEFTADSVGGMFGLYFA AHTPQNYGDMARSNIDAFKRFFHGMLDRNTAFGPSAYEAGFVSAAHTPELIDETIATAHQ VFAEMAK >gi|257257227|gb|ACDX02000015.1| GENE 7 8955 - 9362 693 135 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261365366|ref|ZP_05978249.1| ## NR: gi|261365366|ref|ZP_05978249.1| hypothetical protein NEIMUCOT_05788 [Neisseria mucosa ATCC 25996] hypothetical protein NEIMUCOT_05788 [Neisseria mucosa ATCC 25996] # 1 135 1 135 135 258 100.0 8e-68 MLRGFILMLTLLVSTVSYAAQRKLPSDMDAAVLKQVELPYLKVSRGGFSWTRLLTLGIAD GNSAKLQITRFTKIHDENDRFIPMGRLAGKTGKTIAFKHNDTNALVREVWVLTDDEASRF TAQKEVRDEVKKDAQ >gi|257257227|gb|ACDX02000015.1| GENE 8 9564 - 10892 527 442 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|16079597|ref|NP_390421.1| hypothetical protein BSU25430 [Bacillus subtilis subsp. subtilis str. 168] # 1 430 1 426 451 207 33 1e-52 MKKVFIRTFGCQMNEYDSEKMLAVLAEENGGIEQVTEADEADIILFNTCSVREKAQEKVF SDLGRVRPLKEKNPDLIIGVAGCVASQEGENIIKRAPYVDVVFGPQTLHRLPKMIVDKET SGLSQVDISFPEIEKFDHLPPARVEGGAAFVSIMEGCSKYCSFCVVPYTRGEEFSRPLND VLTEIANLAQQGVKEINLLGQNVNAYRGEMEDGEICDFATLLRIVHEIPGIERMRFTTSH PREFTDSIIECYRDLPKLVSHLHLPIQSGSDRVLSAMKRGYTALEYKSIIRKLRAIRPDL CLSSDFIVGFPGETEREFEQTLKLVKDIAFDLSFVFIYSPRPGTPAANLPDDTPHAEKVR RLEALNEVIEAETARINQTMIGTVQRCLVEGISKKDPDQLQARTANNRVVNFTGTPDMIN QMIDLEITEAYTFSLRGKPVEA >gi|257257227|gb|ACDX02000015.1| GENE 9 11130 - 13922 4265 930 aa, chain - ## HITS:1 COG:NMA0622 KEGG:ns NR:ns ## COG: NMA0622 COG0060 # Protein_GI_number: 15793612 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Isoleucyl-tRNA synthetase # Organism: Neisseria meningitidis Z2491 # 1 930 1 929 929 1830 94.0 0 MTDYSKTVNLLESPFPMRGNLAKREPAWLKSWYEHKRYQKLREIAKGRPKFILHDGPPYA NGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPIEVMVEKLHGKDMPKARFR ELCREYAAEQIARQKKDFIRLGVLGDWDNPYLTMDFKTEADTVRMLGEIYKSGYLYRGAK PVQFCLDCGSSLAEAEVEYKDKVSPAIDVAYPFKDTAALAAAFGLSGIEGKAFAVIWTTT PWTLPASQAVSAGADVVYQLIDTPKGKLVLAKDLAEDTLKRYGFVSDDLSVLAETTGDKL ENLHMNHPFLERDILMLNGEHVTTDAGTGLVHTAPAHGLEDYAVCNKYGIELYNPVNAEG KYISETPRVAGMSVWEANPVILQWLEETGNLLASSKIEHSYAHCWRHKTPLIYRATGQWF VGMDKAGSDGKTLRDKAIKAVDDTEFFPSWGRARLEAMIEGRPDWVVSRQRYWGTPMTFF VHKETGELHPNSAELLEKVALKIEEKGIEAWFSLDKSELLSAEDCENYDKLSDTMDVWFD SGSTHYSVLKQREELDWPADLYLEGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHGFVV DQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEILKRVTESYRRIR NTLSFLFANLSDFDPFEHTVPQADMVEIDRYALVLARQLQERLAGDFYPRYAFHFAVKDI VAFCSEDLGAFYLDILKDRLYTTKADSHARRSAQTALYHITRSLVLLIAPILCFTGEEAW DIIGGGEEDSVLFHTWHEFPPINEKAEAELVKKWTAVREAREAVTAAIEPLRTDKTVGSS LQAEAEITAPEATADYLNALGEELRFALLVSKVDVKTGSELAVTAKASDGEKCERCWHYT YDIGSVAGHETICKRCAENVDGKGEERHYA >gi|257257227|gb|ACDX02000015.1| GENE 10 14197 - 14427 320 76 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261365369|ref|ZP_05978252.1| ## NR: gi|261365369|ref|ZP_05978252.1| hemin transport protein HemS [Neisseria mucosa ATCC 25996] hemin transport protein HemS [Neisseria mucosa ATCC 25996] # 1 76 1 76 76 145 100.0 1e-33 MIIYIINFLNIFLDDAKLAELWFVRRPGRNGIVHSIEAYDERRNLVLQLFGRPADAEAES EAWRALIAEVRQTYGL >gi|257257227|gb|ACDX02000015.1| GENE 11 14617 - 15405 1174 262 aa, chain + ## HITS:1 COG:PM1078 KEGG:ns NR:ns ## COG: PM1078 COG4558 # Protein_GI_number: 15602943 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type hemin transport system, periplasmic component # Organism: Pasteurella multocida # 1 262 3 264 264 257 48.0 2e-68 MKKTIIAAVLTLLAAHASAQRVVILTPDVADITAKLGADKEVVGIHEFNRNPAYKDTPSI GFYRNFSAEPIIAKKPDLVIGSWMAKPDGIYAQLSRAGIKAENVNSNETLEQYQQSFARI GKLLGKEKQAQALAQQFKNSIKAQPANGKRYILSYDGRYVAGKNTVGDVLIRLAGGTNAA ASVDGLKPFSREGWLNAKPDVIIIAKHNEKALGGLDKIMTRPEIASSPAGKNKRILFWQA DDYMRYGLYTPGIVRKLHDLGK >gi|257257227|gb|ACDX02000015.1| GENE 12 15739 - 16671 1343 310 aa, chain + ## HITS:1 COG:PM1079 KEGG:ns NR:ns ## COG: PM1079 COG0609 # Protein_GI_number: 15602944 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Pasteurella multocida # 1 309 1 311 314 279 61.0 4e-75 MKKWLPALPVLSLFLIWFCAGVGEGGWSNPLAADPVLMEIRLPRIFVALLVGAALSASGA ALQALFENPLADPSLIGTSGGAAMGVVLAIAMGWSIAVPLAAFAGAFAVCILILLGHRLV GGGKLGLLVMGFVVSALCGALVSLILFLSDDMALRSAMTWLSGSFSEAGFVSPAYAGGVM LAGLVVLTAVGRRLDYLLLGDETAHTMGISVAATRVATIIGAALMTGAAVSLGGIIGFVG MMIPNVLAQAVGGSRTRLIILSAAVGSIFMLLADTFARWVVYPIDLPVGIVIAILGGPFF LWLIVKDQRS >gi|257257227|gb|ACDX02000015.1| GENE 13 16673 - 17416 179 247 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 32 218 35 224 305 73 25 3e-12 MALLIENCTVKAGKRTILSLERAEFPKCAVSAVIGPNGAGKSTLLKQFLYHPQASWCGTP MKDALKQHKIAWVGQHEHFNLPMTLSEYVLIGRYPKLAWYRRPKQADTRRAQALLEHFDL ADLQHKRIQTLSGGEQQRAAVIRALLQDAEVLFLDEPTNHLDVRYQHSLMQHLTTLPEQG MTVVMVLHDLNLAAHYASHITLMKNGSITAAGSTADIMDAERLSQTYDWRILECTANGKT WFQAETL >gi|257257227|gb|ACDX02000015.1| GENE 14 17928 - 18446 914 172 aa, chain - ## HITS:1 COG:NMA0412 KEGG:ns NR:ns ## COG: NMA0412 COG3265 # Protein_GI_number: 15793417 # Func_class: G Carbohydrate transport and metabolism # Function: Gluconate kinase # Organism: Neisseria meningitidis Z2491 # 1 172 1 172 172 291 85.0 3e-79 MTTHFVMMGVCGCGKTTAALSLQKHLDQCPYAEGDDFHTQANRDKMGAGIPLTDEDRYPW LCNLRDWMTEQAQSSAAYTIVTCSALKRQYRDILRSAQGKTAFIHLTPPQAINLERMMAR QGHYMKAGMLDSQLEILEELGADEYGVKIDNPGSPEAVEADILAWVKAEGLL >gi|257257227|gb|ACDX02000015.1| GENE 15 18681 - 20066 1551 461 aa, chain - ## HITS:1 COG:NMA0413 KEGG:ns NR:ns ## COG: NMA0413 COG2610 # Protein_GI_number: 15793418 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism # Function: H+/gluconate symporter and related permeases # Organism: Neisseria meningitidis Z2491 # 1 461 1 461 461 642 87.0 0 MDGWTQTLSAGWLLGIAAMAIVLILLLIVKLRVHALLTLVSVSLLTAVATGLPMDKIVND VLLKNFGGTLGSVALLVGLGAMLGRLVETSGGAQSLADALIRMFGEKRAPFALGVASLIF GFPIFFDAGLVVMLPIVFATARRMKQDVLPYALASIGAFSVMHVFLPPHPGPIAASEFYS ANIGQVLILGLPVAMFTWYVSGYLLGQILGRTIRVPVPDLLSGGAVDNDQPQTPAKASTV VGIMLIPMLLIFMNTGLSTLISEKVVSADEHWVQVARMFGSTPVALLISVLVALYVLGSK RGVKASALEKTVDGALAPVCSVILITGAGGMFGGVLRASGIGQALADSMANLGIPVLLGC FLVALALRIAQGSATVALTTASALMAPAVAAAGFNDWQLACVVLATAAGSVGCSHFNDSG FWLVGRLLDMDVPTTLKTWTVNQTLIAAIGFSVSALLFAVV >gi|257257227|gb|ACDX02000015.1| GENE 16 20578 - 20892 264 104 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|88811874|ref|ZP_01127127.1| S30EA ribosomal protein [Nitrococcus mobilis Nb-231] # 1 104 1 104 108 106 48 4e-22 MNLKITGLNFDVTEAIKNYVSEKLERINRHAANAISVTITLSVEKLNQQAEADIHLAGKD LHVEAVEQDMYAAIDVLMDKLDRAVLKHKEKSGDVRSTVKPAAE >gi|257257227|gb|ACDX02000015.1| GENE 17 20959 - 22311 1998 450 aa, chain - ## HITS:1 COG:NMB0217 KEGG:ns NR:ns ## COG: NMB0217 COG1508 # Protein_GI_number: 15676143 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog # Organism: Neisseria meningitidis MC58 # 1 245 1 243 283 318 66.0 1e-86 MTLLGLKLRQTQQLNQRLQQSLRILQMSGIELEREVEDWLQDNPLLERPETDEFADADFN HGTTMPRSNHLGGDDAEDAWLNIAKEEDFNQYLHTQVCEHPLSDKEAAYVHILIDFLDDQ GYFTDSIQDVIDNTPLEWMLDEDELQNALDLLQTFDPPGVAAADLTESLMLQLMRLPASP ARQAAAHLIQSSLHDLGKNRKQNIIRFRKLFPEIDSETIETALDIIATLNPYPAYGFASS EPTAYIQPDVWVKEGKDGWKVIGNEAAWPKLQLNREYCELMKSAEDGAPEWKEKINEAKQ RIDSLELRKSTVIRLAEYIVKNQEDFFIFGEIGLAPMLMKDAAAELGLAESTISRAANQK YLSCPRGLFALRYFFTQAVNSEGDKEGLSQGAIKAVLGQIIENEDASKPHSDETLVRLLK QQGIDIARRTVAKYRESLDIPPAHKRKFTE >gi|257257227|gb|ACDX02000015.1| GENE 18 22562 - 23296 281 244 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 10 232 4 231 245 112 27 4e-24 MSENTSRLVVQNLQKSFKKRQVVKSFSLEIESGEVIGLLGPNGAGKTTSFYMIVGLIAAD AGSVTLDGQELRHLPIHERARLGVGYLPQEASIFRKMTVEQNIRAILEISTKDKNRIDGE VEKLLADLNIGHLRHNPAPSLSGGERRRVEIARVLAMKPRFILLDEPFAGVDPIAVIDIQ KIIDFLKSRGIGVLITDHNVRETLSICDRAYIISDGTVLASGKPDDLVNNEQVRSVYLGE NFKY >gi|257257227|gb|ACDX02000015.1| GENE 19 23389 - 23919 881 176 aa, chain - ## HITS:1 COG:NMA2132 KEGG:ns NR:ns ## COG: NMA2132 COG1934 # Protein_GI_number: 15795003 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 176 1 176 176 219 78.0 3e-57 MIQKICKACVLTAFFATAPAYALQSDSKQPIQIEADQGSLDQNNQSTTFTGNVIIKQGTL NIRAGSVNVSRNDKGEQFMKASGSPVRFSQTLDDNKGTVNGQANNVTYSSAINLVTLTGN AKVQRGGDVAEGAVITYNTKTEVYTINGSSKTGAKSAAKSGRVSVVIQPSSTQKTK >gi|257257227|gb|ACDX02000015.1| GENE 20 23900 - 24481 729 193 aa, chain - ## HITS:1 COG:NMB0354 KEGG:ns NR:ns ## COG: NMB0354 COG3117 # Protein_GI_number: 15676269 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 1 193 1 193 193 320 79.0 1e-87 MKVRWRYGIAFPLVLAVALGGLSAWLGRISEIDIEEVKLNPNQPQYTMDGIDGRRFDEQG RLKEHLSARGAKQFPESTDVHFELPHLVFFQEGSRLYDVGSDEAVYNTQTKQLLFKHNVV LTKAADAKRQAGVVKTELLHVDTESQYAKTDTPVTFQYGESSGSAEGLTYDHKKGLLNFP SRVKATIYDTKNM >gi|257257227|gb|ACDX02000015.1| GENE 21 24478 - 25014 688 178 aa, chain - ## HITS:1 COG:NMA2134 KEGG:ns NR:ns ## COG: NMA2134 COG1778 # Protein_GI_number: 15795005 # Func_class: R General function prediction only # Function: Low specificity phosphatase (HAD superfamily) # Organism: Neisseria meningitidis Z2491 # 1 178 1 178 178 333 93.0 1e-91 MQTLDPELQQRAAHIKLLILDVDGVLTDGRIFIRDNGEEIKSFHTLDGHGLKMLQASGVQ TAIITGRDAPSVGIRVKQLGINYYFKGISDKRAAYEELRAQAGVEEAECAFVGDDVVDLP VMVRCGLPVAVPDAHWFTLQHAAYITKQAGGAGAVREVCDLIMRAKGTLGAALNEYIK >gi|257257227|gb|ACDX02000015.1| GENE 22 25259 - 26197 1609 312 aa, chain - ## HITS:1 COG:NMA0381 KEGG:ns NR:ns ## COG: NMA0381 COG0583 # Protein_GI_number: 15793389 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Neisseria meningitidis Z2491 # 1 306 1 306 309 566 91.0 1e-161 MDSIIELRHLKTLLALEETGSVSLAAKRVFLTQSALSHQIRALENYYDTPLFERKSTPLR FTPAGERLLRLARELLPQVSAAERDLARIIEGEAGELRLAVECHTCFDWLMPAMGEFRPM WPQVELDIVSGFQADPVGLLLQHRADLAIVSEAEKQNGISFRPLFAYEMVGICAQDHPLA AKTVWEAEDFIGETLITYPVPDEMLDLPKKILLPKGINPPRRRSELTIAIIQLVASKRGI AALPYWTVMPYLEKGYVVHRQITANGLQSELYAATRTEDADKSYLDNFCQIVRERSFADL PGLSELTMLGQD >gi|257257227|gb|ACDX02000015.1| GENE 23 26392 - 27177 524 261 aa, chain + ## HITS:1 COG:NMA0382 KEGG:ns NR:ns ## COG: NMA0382 COG0327 # Protein_GI_number: 15793390 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 13 261 1 249 249 383 71.0 1e-106 MKFNPLCVERNDMAKRNDILAWCDEVLQVGMFKDYAPNGLQVEGRAEVGKIATSVTASKA AVDFAAEQGADMLLVHHGMFWKSEPVTITGWKKARIETLLQHQINMAGYHLPLDAHPVLG NNAQLAEKLGWEVEKQFGEQNLLNIGRLKKPQTLAEWLQHIATILERQPVAVGDMSREIK RIAWCTGGAQGFFQTTIDEGVDAYLTGEISEAQFHLANETGVAFVSAGHHATERYGIRAL GEAVARHFELEICHFDEDNPA >gi|257257227|gb|ACDX02000015.1| GENE 24 27300 - 27881 663 193 aa, chain + ## HITS:1 COG:NMA0383 KEGG:ns NR:ns ## COG: NMA0383 COG0723 # Protein_GI_number: 15793391 # Func_class: C Energy production and conversion # Function: Rieske Fe-S protein # Organism: Neisseria meningitidis Z2491 # 1 193 1 193 193 359 88.0 1e-99 MDNQEINSGRRRFLTLATCGAGGVAALGVATPFVASFFPSEKAKAAGAPVEIDVSKIESG QMLTAEWQGKPIWVVNRTDQQLKDLKALDGAVSDPKSEVDHQPENCKNETRSIKPNIFVA IGICTHLGCSPTYRPDVAPADLGADWKGGFFCPCHGSKFDMAGRVYKGVPAPTNLVVPPY KYLSDTTVLVGED >gi|257257227|gb|ACDX02000015.1| GENE 25 27900 - 29249 1809 449 aa, chain + ## HITS:1 COG:NMA0384 KEGG:ns NR:ns ## COG: NMA0384 COG1290 # Protein_GI_number: 15793392 # Func_class: C Energy production and conversion # Function: Cytochrome b subunit of the bc complex # Organism: Neisseria meningitidis Z2491 # 1 449 1 449 449 813 97.0 0 MANQTNNKAKALLDWTDARFPLSKMWNEHLAQYYAPKNFNFWYYFGSLALLVLVIQIVSG IFLTMNYKPDGNLNAYHLPAAFTAVEYIMRDVSGGWIIRYMHSTGASFFFIVVYLHMFRG LIYGSYKKPRELVWIFGSLIFLALMAEAFMGYLLPWGQMSFWGAQVIINLFSAIPVIGPD LSTWIRGDFNVSDVTLNRFFALHVIAVPIVLLGLVVAHIIALHEVGSNNPDGVEIKKLKD ENGVPLDGIPFHPYYTVKDILGVVVFLIVFCSVLFFAPEGGGYFLEAPNFDAANALKTPP HIAPVWYFTPFYAILRAIPSFLGTQVWGVIGMGAAVVLIALLPWLDKGEVKSVRYRGPIF KTALVLFIIAFIGLGILGAMVATDTRTLVARILSFVYFAFFLGMPFYTKLDTNKPVPERV TMSTTKQKIMFFVYVGITAVGAYLFATNI >gi|257257227|gb|ACDX02000015.1| GENE 26 29264 - 30049 775 261 aa, chain + ## HITS:1 COG:NMB2051 KEGG:ns NR:ns ## COG: NMB2051 COG2857 # Protein_GI_number: 15677873 # Func_class: C Energy production and conversion # Function: Cytochrome c1 # Organism: Neisseria meningitidis MC58 # 1 261 6 266 266 515 94.0 1e-146 MKHTLKNWFAALLLAVPMSAAVASGGGHYEKVDIDLRDQVSLQRGAQIFTNYCLSCHSAS GMRFNRLKDIGLTDEEIKKNLMFTTDNVGDVMLAAMNPKDAAKWFGAAPPDLTLIARSKG ADYLYAYMRGFYKDPTRPSGWNNVVFDKVGMPHPLWEQQGVQAVELDAKGQPVMVKDEHG VSKPKLYWESTGAHSRRLPNGKVIQTEYDNYVRDLVNYLVYMGEPAQLQRKRTGYIVLMF LFAVMLPLAYFLKKEYWKDVH >gi|257257227|gb|ACDX02000015.1| GENE 27 30262 - 31029 1086 255 aa, chain - ## HITS:1 COG:NMB2062 KEGG:ns NR:ns ## COG: NMB2062 COG0476 # Protein_GI_number: 15677884 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 # Organism: Neisseria meningitidis MC58 # 2 245 9 252 256 347 70.0 9e-96 MNDHQLLRYSRHILLDEISIEGQEKILAARVLVVGCGGLGAAALPYLAASGVGKLIIADH DTIDDTNLQRQTTFTEADIGQAKAQVMAGRLKAVNSACDITALTEKLDETRLTELMHTAD IVLDCTDNYPTRQAINRAAVATHTPLVSGAAVRFEGQIAVYRPDLPDSPCYACLFDGDTA DDGACALFGVFSPLVGIIGATQAAETLKILTGAGEPAHGKLKTYNALTGKWQEFLFTQNP DCNVCTKPESDEPYR >gi|257257227|gb|ACDX02000015.1| GENE 28 31462 - 32436 1055 324 aa, chain + ## HITS:1 COG:NMA0451 KEGG:ns NR:ns ## COG: NMA0451 COG4606 # Protein_GI_number: 15793454 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type enterochelin transport system, permease component # Organism: Neisseria meningitidis Z2491 # 1 324 1 322 322 399 85.0 1e-111 MSVKPLSLNLINCFVLVVLFVVSLSVGVGDFRWADVFRWTLSDSTELMLVSRLPRTFAIV LTGASMAVAGMIMQILMRNRFVEPSMVGASQSAALGVLVMTLVFPAAGLTAKMSVAAVAA LAGMLVFMMLIRRLPPTAQLMVPLVGIIFGGVIEAVATFIAYEFEMMQMLSVWQQGDFSG VLLGRYELLWLTGGLALAAYLIADQLTILGLGETVSVNLGLNRTAVLWVGLVIVALITSL VLVTVGNIPFIGLVVPNIISRLMGDKLRQSLPAVALLGASLVLLCDILGRVIVFPFEIPV STVFGVLGTVLFLWILLRKPAHVV >gi|257257227|gb|ACDX02000015.1| GENE 29 32426 - 33424 794 332 aa, chain + ## HITS:1 COG:NMB1991 KEGG:ns NR:ns ## COG: NMB1991 COG4605 # Protein_GI_number: 15677819 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type enterochelin transport system, permease component # Organism: Neisseria meningitidis MC58 # 15 332 7 324 324 459 88.0 1e-129 MSSENKRSALRPNKVAFMQGSSRPLWAAFVLLLVCCTLFLTLNIQGDWDFVLQLRLTKLA ALLLVAYAVGVSTQLFQTLTNNPILTPSILGFDSLYVFLQTLLLFALGGVGYTSLPLTGK FGFELVMMMGGSLLLFYTLIQQGGRDLSRMILIGVIFGILFRSLSSLLTRMIDPEEFTAA QANMFANFNTVHSELLGVGALIMLASAVAVWRERHRLDVHLLGRDQTINLGINYTRNTLW LLLWIAALVATATAVVGPVSFFGLLAAALANHFAPSVRHSVRLPMTVCVGGILLVGGQTV FEHLLGMKAVLSVVVEFAGGLVFLYLVLKRKR >gi|257257227|gb|ACDX02000015.1| GENE 30 33585 - 35450 1478 621 aa, chain + ## HITS:1 COG:NMB1836_1 KEGG:ns NR:ns ## COG: NMB1836_1 COG1835 # Protein_GI_number: 15677672 # Func_class: I Lipid transport and metabolism # Function: Predicted acyltransferases # Organism: Neisseria meningitidis MC58 # 1 453 1 448 466 308 43.0 2e-83 MSKVLKYRPDLDGIRALAVLSVIVFHIDPQWLPGGFLGVDMFFVLSGYLITTIISREIRD GSFSFLEFYKRRAKRILPVFACVLLCTTVVAAVFFLSFDLRQYVKSAVFALLFAANLFFA RRGGYFDADATEKPLQHIWSLSLEEQFYFIFPALLILFFRISKRRNVRTFILLLIVISLF SALLPTLGMEAYFLPHVRAYELLVGSLFAFIPPAEQNDKASTPLFGWLMMAVIAVTLVLP YGVLPGAGNIERLLCCTAVGGLIYSGKSLQMQEGFNTSKLLSLKPVVFIGLISYSLYLWH WVVLAMMRYIYMDAQLPLAASALAVIIMLLLSVLSYYFVETPARKVKNFTTAKFKWTMAA YFALLIPATAYLMTAKPAAFETTLYQADESKICADTLTKTDCAVGMANKKPEVLVIGDSH AAHLSPFLDIVGKKEGWSADVITSNSCATAFGFTLPDSDRRADRCNPYNSFIEQKTKDYP VIIISQRWFLHTAKPEFLERFNTMLEDLVKAGKQVYVLADTPMDGQLPLRRYYLKQKLGI DIHYVSEDKKAEIRDSAKSEDEIEKIVKQHRSVQWVDFMQYIPADKLIDGLPVYFDTNHL NPFGSSKIAEMFINDKRTLLK >gi|257257227|gb|ACDX02000015.1| GENE 31 35509 - 36132 993 207 aa, chain + ## HITS:1 COG:no KEGG:NMB1992 NR:ns ## KEGG: NMB1992 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis # Pathway: not_defined # 1 207 1 208 208 344 85.0 1e-93 MTQEHFPEFFEQAPTLTVQDALAEFLGAAEEGIMQYRYADAVRLCGHSCPTVAGAYLMTL KGLKALYGSDLPQRGGIEAAMQGARDEGTVGVTASVVQLLTGAAPETGFGGIGPQGRFAR RNLLSFDADIEGTLTLRRKDNSKTVAVSLNAAMQPFAPEMRDIMPKAVSGTATTEELKRF GELWQARVKAFLIDLADDPQFVIVREI >gi|257257227|gb|ACDX02000015.1| GENE 32 36205 - 36963 228 252 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 224 1 227 245 92 27 6e-18 MITIRNVSFHIGGNPILNNVSLDIPEGGITALIGPNGAGKSTLLSFMARLRPLEQGSISY AGKDVSTTPTAELAKTLSILTQENSVMSRITVRDLLMFGRYPYHQGRPTPEDLAIVENAL SEFKLDSFASRYLTELSGGQRQRAMIAMVFCQSTDYVLLDEPLNNLDMYHARALMQLLQR LTREHKRTTVVVLHDINQAAAYADHVIAMKNGQVAMTGTPNNIFTAENIKDLFDMDVDVL DYQGKKLVVHHV >gi|257257227|gb|ACDX02000015.1| GENE 33 37406 - 37633 92 75 aa, chain + ## HITS:1 COG:no KEGG:NMC0437 NR:ns ## KEGG: NMC0437 # Name: not_defined # Def: putative lipoprotein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 75 5 79 79 100 85.0 2e-20 MNNWKQFIFFVILVIACYQFLYFLSDMFLLGYINKYSWNLNFIQGTLNFLSIFLPYVFVR RIFRKTNQEKEDANN >gi|257257227|gb|ACDX02000015.1| GENE 34 37833 - 38876 1253 347 aa, chain - ## HITS:1 COG:NMB1859 KEGG:ns NR:ns ## COG: NMB1859 COG0809 # Protein_GI_number: 15677694 # Func_class: J Translation, ribosomal structure and biogenesis # Function: S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) # Organism: Neisseria meningitidis MC58 # 1 342 1 342 346 602 88.0 1e-172 MDISDFDFTLPDQLIAQHPPEVRGSSRLLVALPDMPLQDRAFGNLPDYIEAGDVLVFNNT KVMKARLFGQKESGGKIEALIERVLDNHTALAHIRSSKSPKPGTKLIFEGDICAVMVERA DELFCLRFEGEQTVYELLEQNGHLPLPPYIERAAGADDDKRYQTVYAKHQGAVAAPTAGL HFTDELLGRLKTKGVETAEVTLHVGAGTFQPVRVDKIEEHKMHSEWFDVPPETVAAIEAA HARGNKVWAVGTTSMRALESAARETGRLKAGQGDTDIFITPGYRFRVIDRLITNFHLPKS TLLMLVSAFSGMEHIRTVYRHAVEHEYRFFSYGDAMVLGRSETDIAD >gi|257257227|gb|ACDX02000015.1| GENE 35 39055 - 40134 1508 359 aa, chain + ## HITS:1 COG:NMA0611 KEGG:ns NR:ns ## COG: NMA0611 COG0489 # Protein_GI_number: 15793601 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Neisseria meningitidis Z2491 # 1 359 17 375 375 578 82.0 1e-165 MNIPAISAAIEAVKIPGTERTLGSEKAVKLLEERADGLHIGLKFGFPAGHIAADIANSLQ EAVIGITGDAHIHLSIDTEITTHKVQPGVATIKGVKNIIAVASGKGGVGKSTTTANLATA MARMGARVGVLDADLYGPSQPTMLGVQDRKPDQQNQKLIPVEADSGIQVMSIGFLVDTDQ AVVWRGPMVSQALQQLMFQSEWDEVDYLFIDLPPGTGDIQLTLSQKIPVTGSVVVTTPQD IALIDARKAVDMFHKVNIPIFGVLENMSVHICSNCGHAEAIFGSEGGKNLAGRLNVPLLG QLPLSLPVREAMDGGAAKQLFDEHPAIAKIYTDAAFQIALTIADKGKDFSSRFPKIVVE >gi|257257227|gb|ACDX02000015.1| GENE 36 40663 - 41856 1984 397 aa, chain - ## HITS:1 COG:NMA0719 KEGG:ns NR:ns ## COG: NMA0719 COG1448 # Protein_GI_number: 15793696 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Neisseria meningitidis Z2491 # 1 397 1 397 397 786 96.0 0 MFFNHIEAAPADPILGLGEAFKAETRPGKVNLGIGVYKDASGATPIVKAVKEAEKRLLES ETTKNYLTIDGVADYNEQTQILLFGADHEIVASRRAKTAQSLGGTGALRIAAEFAKRQLN AQTVWISNPTWPNHNAIFKAVGIQDKPYRYYDAAKHGLDWDGMIEDLSQAQKGDVVLLHG CCHNPTGIDPTPEQWETLAKLSAEKGWLPLFDFAYQGFGNGLEEDAYGLRTFLKYNKELL IASSYSKNFGMYNERVGAFTLVAEDEATAARAHSQVKTIIRTLYSNPASHGANTIALVLK DADLKAQWIAELDEMRGRIKAMRQKFVELLKAKGANQDFDFIIEQNGMFSFSGLTPEQVD RLKNEFAIYAVRSGRINVAGITDDNIDYLCESIVKVL >gi|257257227|gb|ACDX02000015.1| GENE 37 41960 - 42376 664 138 aa, chain - ## HITS:1 COG:NMB0534 KEGG:ns NR:ns ## COG: NMB0534 COG1238 # Protein_GI_number: 15676440 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis MC58 # 5 135 5 133 137 155 69.0 2e-38 MPLIYAYLGLAASAFTSATILPGTSEAAFAAFIYNYPEQAYGAWLCAGLANGLGSMVSYW MGRLIPSKNMKRSSEKTLHLLQRWGTLPLLFAWLPVIGDALPIAAGWLRLNPYTSALMLL TGKILRYGIILAGIKGLM >gi|257257227|gb|ACDX02000015.1| GENE 38 42633 - 43856 1466 407 aa, chain + ## HITS:1 COG:NMB0535 KEGG:ns NR:ns ## COG: NMB0535 COG0738 # Protein_GI_number: 15676441 # Func_class: G Carbohydrate transport and metabolism # Function: Fucose permease # Organism: Neisseria meningitidis MC58 # 1 407 20 426 426 650 89.0 0 MSTPSQQNHNSALVVLTTLFFMMGFITCMNDILIPHLKEIFDLTYVQAMLIQFCFFTAYA IMSIPMGHLVGKIGYKNGVIGGFLLTAVGCLLFYPAAGSHSYPTFLGALFILASGVTLLQ VAGNPYVTLLAKPGKESATLTLVQAFNSLGTTIAPQIGAFLILADATQTVSKAEKISSVQ IPYLGLAGLLIILAVFVKMIRLPDARKIAEAESEHNHDGKSSVWQYKHLVLGAAGIFCYV GAEVSIGSLMVNVLGFLKGLDHASAAQYLSFYWGGAMVGRFLGSAVMAKIAPNRYLAFNA TIAVVLLIIAMMTGKGNADVAMWALLAIGFFNSIMFPTIFSLATKNLGKFTNAASGVLCT AIVGGAIVPVVQGWAVDTYSLMSSFIVSAVCYLYIVFFALKGYKADE >gi|257257227|gb|ACDX02000015.1| GENE 39 44192 - 44815 832 207 aa, chain + ## HITS:1 COG:VCA0092 KEGG:ns NR:ns ## COG: VCA0092 COG1075 # Protein_GI_number: 15600863 # Func_class: R General function prediction only # Function: Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold # Organism: Vibrio cholerae # 3 206 2 204 209 99 34.0 3e-21 MSKIILLHGLHMHSWVMKPLADMLEKQGFDVALFGYYSVWHTMQQHTQALAEFVEKHDTG EPLHFAGHSLGGLVLRHFAAAHPEKITGRIVTFGTPHQGSRAAQRVFRLGLKTPVLGGAY RDALDGGTPDLPEHIELGSIAGNKPLGLGRVLGLHGEHDGTVLVSETRCPNMRDHVILPV SHSGMLFKHITAEQTAKFLSEGQFNHG >gi|257257227|gb|ACDX02000015.1| GENE 40 44931 - 45533 939 200 aa, chain - ## HITS:1 COG:RSc1558 KEGG:ns NR:ns ## COG: RSc1558 COG0655 # Protein_GI_number: 17546277 # Func_class: R General function prediction only # Function: Multimeric flavodoxin WrbA # Organism: Ralstonia solanacearum # 8 199 8 199 201 231 63.0 7e-61 MNPNPLKILVLYYSQNGSTLNLARQIARGIESVAGCEAVLRTVPKVSTVCEAVEKDIPDS GAPYATAEDLKTCAALALGSPTRFGNMAAAMKYFIDGTIPQWLGAELAGKPATVFTSTSS QHGGQETTLLTMMLPLLHHGMIISGIPYTESALSSTQSGGTPYGASHVAGHDSKPVLTAE ENDIAFAQGKRLAELAVKLA >gi|257257227|gb|ACDX02000015.1| GENE 41 45669 - 46901 758 410 aa, chain + ## HITS:1 COG:NMA0700 KEGG:ns NR:ns ## COG: NMA0700 COG1295 # Protein_GI_number: 15793680 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis Z2491 # 1 409 1 408 408 690 90.0 0 MPFLKWWQGLLGSKVFAFAWFVVRRFDEERVPQAASSMTFTTLLALVPVLTVMVAVASIF PVFDRWSDSFVAFVNQTIVPQGADMVFDYINAFRDQAGKLTAIGSVMLVVTSLMLIRTID NTFNRIWRVNTQRPWMMQFLVYWALLTFGPLSLGVGISFMVGSVQDSALASFAPQWVVGV LQTLGTLFFATLLLWGLYRFVPNRFVPARHAFIGALVTAFCLETARFLFAWYMGNFDGYR SIYGAFAAVPFFLVWLNLLWTLVLGGAVLTSSLSYWQGDAFRRGFDARGRFDDVLKILLL LDAAQKEGKALPVQEFRRHINMGYDELGELLEKLARHGYIYNGRQGWVLKTGADSIELSE LFKLFVYRPSPLGRDHVNQAVDAVMRPCLQTLNMTLAEFDAQAKKRQQSS >gi|257257227|gb|ACDX02000015.1| GENE 42 46995 - 48770 2378 591 aa, chain + ## HITS:1 COG:RSc1173 KEGG:ns NR:ns ## COG: RSc1173 COG4166 # Protein_GI_number: 17545892 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Ralstonia solanacearum # 16 591 32 619 625 463 43.0 1e-130 MKTLVLLLLSFSTTTAFAAYGLGLGQEPKYPADFRFYEYVNPDAPKGGVFSLPMQGGFDT FNPFTLKGDKEVGVLMLTVDKLTDNSWDEPFSMYGLLAEDFSLAEDGLSATFRLNPKAKF HNGDPVLAKDVAASFRLLSQDKAANPSYRIYWSDVAKVETPDDRTVVFRFKQRNAELHMV LGQLPVFSHKSYPEGLEKGANKMPIGSGPYRFVKADIGRMSEYARDKNYWAQNLPTRKGR YNFDTVRFKYFKDNSVRLEGLKAGQYDFVYENIARNWARAYPGEMLAKRGLGKHEWVQQS NAGIQGFVMNMRRVPFNNILVRQAMVESFDFESVNARIFYGAYRRSNSFFTNSEMAATGK PQGAELKLLQSLGNTLDPAVLNQPVPEPPQTDPKTGIRPNLLKARALFEKAGYRYKNGKL TDSQGKPLTFEFLTASKTYERITAKWQRDLAKIGVTMNIRVTDPALYQRRLNDFDFDMTI TVYANSESPGNEQYDYFGCEAAKIPGSQNLAGVCRPEVEKLLKHFSSFTNREELKTTVQA LDRTIRHQYIIVPAWYADRYRVVYRNNLGIPQQLPKYYDPISFPLSSGWWK >gi|257257227|gb|ACDX02000015.1| GENE 43 49808 - 50623 1515 271 aa, chain - ## HITS:1 COG:NMB1828 KEGG:ns NR:ns ## COG: NMB1828 COG2819 # Protein_GI_number: 15677664 # Func_class: R General function prediction only # Function: Predicted hydrolase of the alpha/beta superfamily # Organism: Neisseria meningitidis MC58 # 1 270 40 310 310 285 55.0 4e-77 MTPRPTHWQAARLLQAEETHIRSEYTGRSYRIQTAAIGDPPPQGYPVLHILDGDAFFPAA LSMAQSLLINPMTRSRAACLIVSIGYPNGEVRDLTQRALDYTPPLPETATEAERRQYGQA DRFAAFLDRELAPALAAKYPVNPKEQALFGHSFGALFGLYSLFTAPERFKHNLLASPSVW WHERRVLDFLPSALPADTAVRISVGEHEGRNNRPEQIGREMVAQAKLLAGTLQHLGADAQ FTLYPNANHGNTPFYALPDHIEYLRQAWQKK >gi|257257227|gb|ACDX02000015.1| GENE 44 50849 - 52999 2758 716 aa, chain - ## HITS:1 COG:NMB1829 KEGG:ns NR:ns ## COG: NMB1829 COG4773 # Protein_GI_number: 15677665 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid # Organism: Neisseria meningitidis MC58 # 1 716 7 708 708 1124 81.0 0 MFRPNLTAAAVVAALSSTVFAAETVELDTVHVKGQRSYNAIATEKNGDYSSFAATVGTKI PASLREIPQSVSIITNQQVKDRNVDTFDQLARKTPGLRVLSNDDGRSSVYARGYEYSEYN IDGLPAQMQSINGTLPNLFAFDRVEVMRGPSGLFDSSGEMGGIVNLVRKRPTKEFQGHAA AGFGTHKQYKAEADVSGRLNADGSVRGRVMAQTSGASPRPAEKNNHHETFYAAADWDINP DTTLGVGYLYQQRHLAPYNGLPVGSSGNLLSLPNHTFVGADWNKFKMNSHDVFADLKHYF DDGGYGKIGMRYSDRDADSNYAFAGSKLGMKTPAGRPGCNTADDKACAVGLGTEIKQKAF AVDASYSRPFAWGNTANELVVGADYNRLRSTNEQGRTTLYARGGLALNEFRSIPQVDLIA NARKGARGYSHTVATENLDEFGVYGKSVFHPVDRLSLIGGWRLGHYKIEAGEGDELHKAS KTKFTGYAGAVYDLNDNNSLYLSMSQLYTPQTSLGTDGNLLKAREGNQFEVGYKGSYMDD RLNTRVSLYRLKDKNAAAPLNPNNRNTRYAALGKRVMEGVETEISGAITPKWQIHAGYSY LHSQIKTAANPRDDGIFLLMPKHSANLWTTYEVTPKLTLGGGVNAMSSIASAAGLRAGGY ATFDAMAAYRFTPKLKLQINADNIFNRHYYARVGSANTFNIPGSERSLTANLRYDF >gi|257257227|gb|ACDX02000015.1| GENE 45 53167 - 54498 2037 443 aa, chain - ## HITS:1 COG:NMB0388 KEGG:ns NR:ns ## COG: NMB0388 COG0477 # Protein_GI_number: 15676302 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Neisseria meningitidis MC58 # 8 395 15 410 451 181 29.0 2e-45 MKISPQVSLTLRQIMLMNFGFFGIQYSFGLQQTAINPIFSFLHADPGQLPILNMAGPITG LLIQPLIGAMSDRTWIPGLGRRRPYFLIGAIGCSLCLFIYPHVTALWVAVLLLWLLDISN NTAMEPFRAFIADTVPERQQSIGFLMQSVFTGLGITLANVSLYIFQQIGWLQQTSEAGIP YWVFGSFYIGAVCSIGSVLVTVLSTPEHEPSPEEMAAIKAQPSGPVHAIKDIGTAIKEMP TPLWQLASVYLFQWYALFIYWQYISHSIVKSVWGSTSADSAAYEQAVAWTGLVNGFYNVV TFVSAFGLMWMARKYAAKYVHAFAVILASLALLTIPHITNKYLMFAPMIGFGIGWASMMG VPFMIVVHSIPKERYGVYMGIVNMMIVIPMLIETVTFGWIYDTFLGTNPSNAMTFAGVFL AIAAVLTLTIKTSNKPYGVESAS >gi|257257227|gb|ACDX02000015.1| GENE 46 54718 - 55755 1158 345 aa, chain - ## HITS:1 COG:mll4964 KEGG:ns NR:ns ## COG: mll4964 COG1609 # Protein_GI_number: 13474146 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Mesorhizobium loti # 6 315 3 309 341 156 37.0 6e-38 MATIYDVAAYAGVSPKTVSRVINGDAPVSDKTRAKVETAIAALGYIPSSAARVMRSHRSD LVGLITGAISRTGEYGGVHGLPDMFLIKGIQQKIREAGKTLMIADTDNRYEQIDPLVRTF MEHRAEGILYVTESHREIVLPEMPNRCPMVLVNCFDAAGTPSVLPDDERGQYDLVRNIIR HGHRRIAYITLQAGAEATRLRLAGYRRALDESDMVFDPDLVQTGITDFANDSEPLIAAVL KLLSLADPPTVICCGNDEMAVRVYGILRTRGVRVPEQVSVAGYDNHSAIAETLFPPLTST ELPYMRMGALAAEILFDIIETKETVRPPVRVVGETIWRQSVTALK >gi|257257227|gb|ACDX02000015.1| GENE 47 56053 - 57681 2312 542 aa, chain + ## HITS:1 COG:NMA2154 KEGG:ns NR:ns ## COG: NMA2154 COG0166 # Protein_GI_number: 15795025 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-phosphate isomerase # Organism: Neisseria meningitidis Z2491 # 1 537 1 537 547 816 72.0 0 MTAFTEAWQALEQHRRDTQHIHLRDRFAAEPDRFGNMHETLDGLLFDYSKNRLGEDTLQL LCRLAEASPLAGQMHAMQNGEKINLSEHRAVLHTALRLPPDAAPVYVDGENILPKLHHEL DRALAYAEALNNGSHRGITDKPITDFVHIGIGGSDLGPRMCVEALKAYRQNIRVHFVSNS DDADISRTLAHLKPETTVFSIASKSFRTPETLLNAYAARAWYRDAGLPESGIYRHFCAIS SDVAAARNFGIAPDNVFAMFDWVGGRYSVWSTIGLPVMVAVGTDRFRELLAGAHAMDTHF FQTPYRRNIPVLMALISIWYNNFQHADGQTAVPYSHNLRHLPSWLNQLDMESLGKNRTAD GQPVPHTTGGIVFGEEGVNCQHAYFQLLHQGTRLIPCDFIVPMTTAYGINRQHRFTVANA FAQAEALMKGKTLEEARAELADLPEAERERLAPQKEFPGNRPSNSLLLSATDPRRLGMLM AAYEHRTFVQGAIWGINPFDQWGVEYGKELAKTIEPELERGNPQHDSSTNGLIAFYRASQ NR >gi|257257227|gb|ACDX02000015.1| GENE 48 58105 - 59451 2019 448 aa, chain - ## HITS:1 COG:NMA0434 KEGG:ns NR:ns ## COG: NMA0434 COG0038 # Protein_GI_number: 15793439 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Neisseria meningitidis Z2491 # 10 444 9 443 469 609 79.0 1e-174 MPTKPPAYHITHKIRQTRRISRKSIAFLFLLAGSALVALTALLFAWMADFALEMNAELVQ KYPWFAWVALPFGLPLIVWITRRFAPYTSGSGIPQVLASLALPYGANKTRLIRLRETLLK IPLTFLAMFAGASVGREGPSVQVGAAVMSAWGAWCKKHGFAFRGMQENDLIAAGAAGGLA AAFNAPLAGVIFAIEELGREVMLRWERQILLGVLAAGFIQVAIQGNNPYFSGFSGGALDN MLGWVLGCGLACGIAGGLFGRTLYLGATAFAPAKWREHIRRHPLITAALIGILLAAIGSL YQGKTYGTGYHEAAQALRGIHEAPAGLAVAKWFSTVLSYWAGTPGGIFTPSLTIGAVLGE RIAVLTGLVQGTHVLVLLCMAAFLAGATQSPLTSAVVVMEMTGGQNLLFWLLIACIFASQ VSRQFSPRPFYHAAGTRFKRQVEQSGQK >gi|257257227|gb|ACDX02000015.1| GENE 49 59656 - 62358 3901 900 aa, chain - ## HITS:1 COG:NMA0374 KEGG:ns NR:ns ## COG: NMA0374 COG2352 # Protein_GI_number: 15793382 # Func_class: C Energy production and conversion # Function: Phosphoenolpyruvate carboxylase # Organism: Neisseria meningitidis Z2491 # 1 900 18 917 917 1596 90.0 0 MQLHILNNPKDAALAADAEFLKQSLYKLLHEEASPLVVETVKLLSTSDDSAALIEKVLPQ LDEQQTHDLTLACGLFAQILNIAEDVHHERRRQIHEEAGHGGAEGSLAETVRKLKAAKIG GKAVQKQLNTTNVTAVLTAHPTEVQRQTVLNFNRRIRALLPRRERCTHADALAELRREID TILLGLWQTSETRHHKISVNDEINNGVSIFPMSFFEALPKLYRSMEREFQTTYPDVDVPD ILKIGGWIGGDRDGNPFVSAETLRFAFGRHADAVFRFYRGELDKLYRELPLSVRRVKVND DVMALSDESPDEEIARTEEPYRRAIAYIMARVMGKARSLGLGMGCKFGFMMPYASAQEFS DDLYKLQRSLCDNGSALLGEGRLADLIRSVSVFGFHMMPLDLRQHAEKHADVVAELFKHA GLEDYASLSETEKQTVLLRELKHQRPLSSPFITYSEHTRREMAIFNEARKIKDEFGENAV TQSIISNCEQPSDLLALALLLKESGLLTVENGKPQSRINIVPLFETIEALENACPVMETM FSNEWYRDLLQSRDNIQEIMLGYSDSNKDGGYVTSSWCLYQAELGLVELFKKYDVRMRLF HGRGGSVGRGGGPSYQAILAQPAGSVAGQIRITEQGEVITAKYADPGNAVRNLETLVAAT LEASLLPDQKDPEPALMQALSDVSFKYYRELITHPDFIDYFLQTSPIQEIATLNLGSRPA SRKTLARIQDLRAIPWVFSWMQNRLMLPAWYGFGSAVESLCEGKPETLAALQAHAQHNPF FQAMLSNMEQVMAKTDITLAENYAGLSESPEKAAVIFGMIKEEYQRSRKALLDLLQTDEL LRDNRSLARSLALRIPYLNALNGLQVAMLKRLRKDPHDPHTLLMVHLTINGVAQGLRNTG >gi|257257227|gb|ACDX02000015.1| GENE 50 62621 - 63097 753 158 aa, chain + ## HITS:1 COG:Cj0252 KEGG:ns NR:ns ## COG: Cj0252 COG0315 # Protein_GI_number: 15791623 # Func_class: H Coenzyme transport and metabolism # Function: Molybdenum cofactor biosynthesis enzyme # Organism: Campylobacter jejuni # 17 148 24 155 157 91 39.0 5e-19 MFNFNSVRENDKRQPIVRTAVASGSINMSTSAIKVLAENATQNAGILNVARVAAVQGIKQ VGLIVPLYQPAVLQHVRVDFDVDIELAYVKATVTVSSEVGKSITTEAITGVNIALISIYD MMKEVDQSMMMTRIHLESESGGERGPFVFDDAYENIDF >gi|257257227|gb|ACDX02000015.1| GENE 51 63523 - 64935 1455 470 aa, chain + ## HITS:1 COG:NMA1975 KEGG:ns NR:ns ## COG: NMA1975 COG3182 # Protein_GI_number: 15794858 # Func_class: S Function unknown # Function: Uncharacterized iron-regulated membrane protein # Organism: Neisseria meningitidis Z2491 # 1 470 1 469 469 793 84.0 0 MDTSQPAPRSEQQANRRYLTVWRWHFYFGLLVAPFLTLLAITGLGMLLFANITGKEGERI HVTPQAQVQPLSAQAEAARQSVNPETASVVQYIAPRADDMVAVFRVNNDDKATMVAVDPY TAKVVSSMPRNEGWYHTMDGIHGDMMLGTAGDYLIETAASLTILMMITGIYLWWAKQRSL KSMLVPQTGKGRSWWRSMHGAFGTWVSLILLLFCLSGVAWAGIWGGKFVQSWSQFPAGKW GVEPNPVSAVPTHGDVLNDGKTKEAPWVLELTPMPVSGTTKGENGINPSEPMTLETVDRF AREIGFKGRYQLNLPKGETGVWTLSQDSMSYDMVSPTADRTVHIDQYSGKILADIRFNDY NFFGKFMAASIALHMGTLGWWSVLANVLFCLAVIFICVSGCVMWWKRRPSKAGGLVPPAQ KIELPVWWAMAVPLLIVAVLFPTAIAAIAVIWLLDTALLSRIPALSRWFK >gi|257257227|gb|ACDX02000015.1| GENE 52 65058 - 65471 275 137 aa, chain - ## HITS:1 COG:RSc2265 KEGG:ns NR:ns ## COG: RSc2265 COG2801 # Protein_GI_number: 17546984 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Ralstonia solanacearum # 1 132 133 265 269 127 51.0 6e-30 MDLFNREIIAYAMSRRADSEMVKEMLEKAAPRLTDKGTMLHSDQGVLYRTAEYRKLIAKH SMVQSMSRKANCWDNAPMESFFAVLKTECFYRAGELTVDELMKQIDDYMDYYNRERCSLK LKKLSPVAYRTQLTQSA Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:11:08 2011 Seq name: gi|257257226|gb|ACDX02000016.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont15.1, whole genome shotgun sequence Length of sequence - 57494 bp Number of predicted genes - 58, with homology - 57 Number of transcription units - 29, operones - 16 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 140 - 424 249 ## NLA_8450 transposase - Prom 526 - 585 2.5 - Term 793 - 842 15.3 2 2 Op 1 . - CDS 861 - 1733 893 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 1811 - 1870 3.0 3 2 Op 2 . - CDS 1929 - 2531 294 ## NMC0329 hypothetical protein 4 2 Op 3 . - CDS 2594 - 3397 319 ## NMB1896 type II restriction enzyme DpnI (EC:3.1.21.4) - Prom 3442 - 3501 4.3 - Term 3451 - 3502 8.3 5 3 Tu 1 . - CDS 3537 - 6173 3895 ## COG0495 Leucyl-tRNA synthetase - Prom 6208 - 6267 7.8 + Prom 6153 - 6212 3.0 6 4 Tu 1 . + CDS 6368 - 7504 1587 ## COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain + Term 7527 - 7577 17.6 - Term 7515 - 7565 13.0 7 5 Op 1 6/0.000 - CDS 7771 - 8232 287 ## COG3335 Transposase and inactivated derivatives 8 5 Op 2 . - CDS 8268 - 8618 294 ## PROTEIN SUPPORTED gi|148984739|ref|ZP_01818007.1| IS630-Spn1, transposase Orf1 - Prom 8650 - 8709 6.7 - Term 8711 - 8763 12.3 9 6 Op 1 2/0.000 - CDS 8788 - 11349 3385 ## COG2844 UTP:GlnB (protein PII) uridylyltransferase 10 6 Op 2 . - CDS 11401 - 11718 271 ## COG1396 Predicted transcriptional regulators - Term 12020 - 12062 8.4 11 7 Op 1 9/0.000 - CDS 12078 - 12650 922 ## PROTEIN SUPPORTED gi|218767988|ref|YP_002342500.1| 50S ribosomal protein L25/general stress protein Ctc - Term 12659 - 12701 -1.0 12 7 Op 2 . - CDS 12716 - 13699 702 ## COG0462 Phosphoribosylpyrophosphate synthetase - Prom 13776 - 13835 5.6 13 8 Op 1 . - CDS 13892 - 14149 233 ## - TRNA 13944 - 14019 71.6 # Gln TTG 0 0 - TRNA 14031 - 14106 71.6 # Gln TTG 0 0 - TRNA 14118 - 14193 71.6 # Gln TTG 0 0 14 8 Op 2 13/0.000 - CDS 14200 - 15045 493 ## COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase 15 8 Op 3 5/0.000 - CDS 15073 - 15660 640 ## COG3017 Outer membrane lipoprotein involved in outer membrane biogenesis 16 8 Op 4 . - CDS 15715 - 17574 1965 ## COG0457 FOG: TPR repeat - Prom 17688 - 17747 5.1 + Prom 17652 - 17711 5.9 17 9 Op 1 . + CDS 17750 - 18367 272 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes + Prom 18412 - 18471 4.5 18 9 Op 2 . + CDS 18562 - 19425 1133 ## COG1210 UDP-glucose pyrophosphorylase + Term 19451 - 19502 9.1 + Prom 19460 - 19519 5.7 19 10 Tu 1 . + CDS 19542 - 20285 1046 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases + Term 20324 - 20371 14.6 + Prom 20529 - 20588 4.7 20 11 Op 1 2/0.000 + CDS 20721 - 21638 1010 ## COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases + Term 21653 - 21702 10.2 + Prom 21835 - 21894 6.3 21 11 Op 2 3/0.000 + CDS 21922 - 22371 535 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 22 11 Op 3 3/0.000 + CDS 22375 - 23337 1132 ## COG1493 Serine kinase of the HPr protein, regulates carbohydrate metabolism 23 11 Op 4 . + CDS 23318 - 24172 1309 ## COG1660 Predicted P-loop-containing kinase + Term 24256 - 24298 -0.8 24 12 Tu 1 . + CDS 24321 - 24551 526 ## gi|261365436|ref|ZP_05978319.1| conserved hypothetical protein 25 13 Tu 1 . + CDS 24706 - 25647 1542 ## COG1161 Predicted GTPases + Prom 25678 - 25737 3.5 26 14 Tu 1 . + CDS 25816 - 26961 1283 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases + Prom 27041 - 27100 6.9 27 15 Op 1 . + CDS 27181 - 27528 291 ## ACIAD1223 hypothetical protein + Term 27562 - 27594 -0.4 28 15 Op 2 . + CDS 27604 - 28413 871 ## COG0350 Methylated DNA-protein cysteine methyltransferase + Prom 28448 - 28507 1.7 29 16 Tu 1 . + CDS 28698 - 29699 1331 ## COG0078 Ornithine carbamoyltransferase + Term 29826 - 29864 -0.1 - Term 29904 - 29953 16.5 30 17 Op 1 . - CDS 29969 - 31687 2641 ## COG0018 Arginyl-tRNA synthetase - Prom 31718 - 31777 4.8 31 17 Op 2 2/0.000 - CDS 31858 - 32667 1202 ## COG0730 Predicted permeases 32 17 Op 3 . - CDS 32671 - 33309 734 ## COG1183 Phosphatidylserine synthase - Prom 33468 - 33527 4.7 33 18 Tu 1 . - CDS 34000 - 35349 1806 ## COG1570 Exonuclease VII, large subunit - Prom 35373 - 35432 4.8 + Prom 35380 - 35439 4.8 34 19 Op 1 2/0.000 + CDS 35462 - 36481 446 ## COG1663 Tetraacyldisaccharide-1-P 4'-kinase + Prom 36496 - 36555 3.2 35 19 Op 2 . + CDS 36593 - 37201 414 ## COG3184 Uncharacterized protein conserved in bacteria 36 19 Op 3 2/0.000 + CDS 37251 - 37826 578 ## COG3184 Uncharacterized protein conserved in bacteria + Term 37862 - 37896 -0.1 37 19 Op 4 11/0.000 + CDS 37921 - 38103 308 ## COG2835 Uncharacterized conserved protein 38 19 Op 5 . + CDS 38100 - 38861 972 ## COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase 39 20 Op 1 . + CDS 38974 - 39639 473 ## ACIAD1306 putative signal peptide 40 20 Op 2 . + CDS 39733 - 40251 669 ## NLA_15650 hypothetical protein + Prom 40253 - 40312 3.8 41 21 Op 1 2/0.000 + CDS 40334 - 40981 1101 ## COG0563 Adenylate kinase and related kinases + Term 41016 - 41060 1.7 + Prom 41099 - 41158 2.3 42 21 Op 2 2/0.000 + CDS 41353 - 42093 942 ## COG0284 Orotidine-5'-phosphate decarboxylase 43 21 Op 3 2/0.000 + CDS 42148 - 43110 1433 ## COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase 44 21 Op 4 1/0.143 + CDS 43152 - 44387 340 ## COG0270 Site-specific DNA methylase 45 21 Op 5 1/0.143 + CDS 44389 - 45507 175 ## COG3440 Predicted restriction endonuclease 46 21 Op 6 . + CDS 45548 - 46552 1682 ## COG0451 Nucleoside-diphosphate-sugar epimerases + Term 46573 - 46623 14.0 - Term 46560 - 46611 18.0 47 22 Op 1 . - CDS 46634 - 47821 1609 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase - Prom 47844 - 47903 6.1 - Term 47966 - 47996 1.3 48 22 Op 2 . - CDS 48027 - 49196 1319 ## COG2070 Dioxygenases related to 2-nitropropane dioxygenase - Prom 49292 - 49351 4.8 - Term 49434 - 49493 12.3 49 23 Op 1 . - CDS 49518 - 50444 1458 ## COG2017 Galactose mutarotase and related enzymes - Term 50473 - 50511 9.5 50 23 Op 2 . - CDS 50519 - 51565 1636 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases - Prom 51664 - 51723 2.8 51 24 Tu 1 . - CDS 51751 - 52383 833 ## COG0259 Pyridoxamine-phosphate oxidase - Prom 52410 - 52469 4.8 + Prom 52422 - 52481 4.7 52 25 Tu 1 . + CDS 52506 - 52958 910 ## COG0756 dUTPase + Term 52973 - 53036 19.2 + Prom 53023 - 53082 6.8 53 26 Tu 1 . + CDS 53125 - 54516 324 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 + Term 54526 - 54589 11.0 + Prom 54557 - 54616 4.0 54 27 Tu 1 . + CDS 54637 - 55551 398 ## gi|261365467|ref|ZP_05978350.1| conserved hypothetical protein + Term 55674 - 55708 -0.4 + Prom 56010 - 56069 3.9 55 28 Op 1 . + CDS 56103 - 56501 66 ## gi|261365468|ref|ZP_05978351.1| conserved hypothetical protein 56 28 Op 2 . + CDS 56516 - 56716 227 ## gi|261365469|ref|ZP_05978352.1| hypothetical protein NEIMUCOT_05926 57 29 Op 1 . - CDS 56700 - 57020 399 ## COG3293 Transposase and inactivated derivatives 58 29 Op 2 . - CDS 57076 - 57492 350 ## Aasi_1471 hypothetical protein Predicted protein(s) >gi|257257226|gb|ACDX02000016.1| GENE 1 140 - 424 249 94 aa, chain - ## HITS:1 COG:no KEGG:NLA_8450 NR:ns ## KEGG: NLA_8450 # Name: not_defined # Def: transposase # Organism: N.lactamica # Pathway: not_defined # 1 81 106 186 221 147 92.0 1e-34 MSKYTLHFKYQAVLHYLHIRSQQRTADHYGISRTHLRRWIRAYQEGGIGALEHPQSKTMT DHRKNPFIADKPDHEKHRQSLSKSCAICAQRLPT >gi|257257226|gb|ACDX02000016.1| GENE 2 861 - 1733 893 290 aa, chain - ## HITS:1 COG:NMA0483 KEGG:ns NR:ns ## COG: NMA0483 COG2207 # Protein_GI_number: 15793483 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Neisseria meningitidis Z2491 # 1 287 15 302 305 336 59.0 3e-92 MVQQGEGGDYLDGSYRFETLCSGISLHGGSLTARKTFQSTRLSEPYIAFVLLLEGSLDFG INRERYRIEAEGGHVLLIACDEEILFSRYLYEGGHTAKLTLKGIDRWLARPQYAGLMQAV YREKVRHWPLDSGLRRLALSSLKGAEQGGLADDLQREADVLQLLAGLWTDFLNRYPYTET AAEPPHPSESFIRLLNQAFDAGAHQVSALADALHISERTLQRRLKESFGTTASEWLRHKH MQYALYALDTDSVSIGEIAYRCGYAHVSSFTKAFREYFGCTPAELRKRGE >gi|257257226|gb|ACDX02000016.1| GENE 3 1929 - 2531 294 200 aa, chain - ## HITS:1 COG:no KEGG:NMC0329 NR:ns ## KEGG: NMC0329 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 59 198 41 180 184 278 93.0 1e-73 MLPQRVAAVKKSENYWQFMRDFSKPAEEAVIYQSRLKKIVSDDLVLYNENSLNAMRKINA GYEVWFNRELKAYCFKKYEFYRFLERPEYNINWKDHLSKRLLPDNGLFIIIRDTLFIIEI KFQQTPSSVDEKLQTCDFKRKQYTKLVHSLGWRVEYVYVLNDWYNRPEYRDVLDYIICVN CHYQFNTIPLRWFGLPDGGN >gi|257257226|gb|ACDX02000016.1| GENE 4 2594 - 3397 319 267 aa, chain - ## HITS:1 COG:no KEGG:NMB1896 NR:ns ## KEGG: NMB1896 # Name: dpnC # Def: type II restriction enzyme DpnI (EC:3.1.21.4) # Organism: N.meningitidis # Pathway: not_defined # 1 267 1 267 267 517 95.0 1e-145 MNLFFDTELGKQQNKATHKIRVMSEAWLEKNGYCPCCGSKPMQRFTNNKPVADLFCPNCH EQYELKSKNQKTVGNSVPDGAYHTMLERIQSDTNPNFFFLAYKKADYSIQQLVLVPKHFI TPDMIIPRNKGIKNRPHHIMCSINLVPLPESGKIFLIDNSRIIEPEIVLKKWQSNLFLRN QNAERKGWLLAIMKCIDQLPKEFTLSQMYEFENKLSIQFPQNNHIKDKIRQQLQILRDQN MIEFIGRGLYKKSINCAQLPRRFDFKS >gi|257257226|gb|ACDX02000016.1| GENE 5 3537 - 6173 3895 878 aa, chain - ## HITS:1 COG:NMB1897 KEGG:ns NR:ns ## COG: NMB1897 COG0495 # Protein_GI_number: 15677729 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Leucyl-tRNA synthetase # Organism: Neisseria meningitidis MC58 # 3 878 1 876 876 1738 97.0 0 MTMQEHYQPAAIEPAAQKKWDDARIFNVSEDASKPKYYCLSMFPYPSGKLHMGHVRNYTI GDVLSRFKLLNGFNVMQPMGWDAFGMPAENAAMKNNVAPAAWTYDNIEYMKTQLKSLGFA IDWEREVATCKPEYYRWEQWLFTKLFEKGIVYRKNGTVNWDPVDQTVLANEQVIDGRGWR SGALIEKREIPMYYFKITDYAEELLNDLDKLEHWPEQVKTMQRNWIGKSRGMTVRFAVSD DSKQGLEGDYAKFLQVYTTRPDTLMGATYVAVAAEHPLATAAAADKPELQAFIAECKAGS VAEADMATMEKKGVPTGRYVVNPLNGDKLEVWIANYVLWGYGDGAVMAVPAHDERDFEFA TKYNLPKKQVIAVGDNAFDSNQWQEWYGDKENGVLVNSGDLDGMNFQTAFDAIAAKLQSQ DAGEPKTQYRLRDWGISRQRYWGCPIPIVHCEKCGDVPVPADQLPVVLPENVVPDGMGSP LAKMPEFYETTCPSCGGAAKRETDTMDTFMESSWYFFRYMSPKFAEGMVSAEAAEYWGAV DQYIGGIEHAILHLLYARFFTKLMRDEGLVSVDEPFERLLTQGMVVCETYYRENDKGGKD WINPADVELTFDDKGRPVSAVLKADGLPVVISGTEKMSKSKNNGVDPQELINAYGADTAR LFMMFAAPPEQSLEWSDSGVEGAHRFLRRLWRTVYEYLKQGGAVKAFAGSQDGLSKELKD LRHKLHATTAKVSDDYGRRQQFNTAIAAVMELLNQYDKTDTSGEQGRAVAQEVLETAVRL LWPIVPHICETLWSELNGAKLWEAGWPTVDEAALVKSEIEVMVQVNGKLRGKITVAADAS KADLEAAALATEGAVKFMEGKPAKKIIVVPGRLVNIVV >gi|257257226|gb|ACDX02000016.1| GENE 6 6368 - 7504 1587 378 aa, chain + ## HITS:1 COG:NMA0209 KEGG:ns NR:ns ## COG: NMA0209 COG0484 # Protein_GI_number: 15793233 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone with C-terminal Zn finger domain # Organism: Neisseria meningitidis Z2491 # 1 378 1 373 373 576 82.0 1e-164 MSNQDFYATLGVARGASDDEIKKAYRKLAMKYHPDRNPDNKEAEEKFKEVQKAYDTLSDK EKRAMYDQYGHAAFEQGMGGGAGGFGGFGGFGGAQGFDFSDIFSQMFGGGGGGGRQQNYQ GADLQVGVEITLEDAAKGIKKRINIPTYEECDVCHGSGAKPGTSASTCSTCHGSGTVHVR QAIFQMQQTCPTCHGTGKEIKDPCVKCRGEGRTKTSKTVEVNIPAGIDDGQRIRLSGEGE PGTHGAPAGDLYVNVRVKEHKIFERNGLDLHCELPISFAVAALGGEVEVPTLDGKVKLSI PKETQTGRRMRVKGKGIKSLRSSATGDLYCHVVVETPVNLTDRQKELLEEFEKISTGLDR SQTPRKKSFWDKVGELFD >gi|257257226|gb|ACDX02000016.1| GENE 7 7771 - 8232 287 153 aa, chain - ## HITS:1 COG:SP0016 KEGG:ns NR:ns ## COG: SP0016 COG3335 # Protein_GI_number: 15899965 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 42 152 1 111 112 140 57.0 1e-33 MPKVYLDETGFDTFYYRPYAYALRGQIVKARISGKRYERMSLVAARGDRELVAPMIYKGT MDSSLFEAWFGQFLLKELKEPSVIIMDNARFHRMAVLREMAQRAGHIILPLPPYSPELNP IEKVWANIKRHLRKVMSGCLSFEQALLGIFCFV >gi|257257226|gb|ACDX02000016.1| GENE 8 8268 - 8618 294 116 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148984739|ref|ZP_01818007.1| IS630-Spn1, transposase Orf1 [Streptococcus pneumoniae SP3-BS71] # 1 116 1 116 116 117 44 1e-25 MAYSIDFRQKALDHYEQHGNISQTARTFRITNRTLYQWIALKKETGSLQHRTKGGNSERI DKEELRRYVAEHPDAYQYEIAQHLGCTTSNVGYLLKTLKITRKKRQPSTKNKTSKK >gi|257257226|gb|ACDX02000016.1| GENE 9 8788 - 11349 3385 853 aa, chain - ## HITS:1 COG:NMB1203 KEGG:ns NR:ns ## COG: NMB1203 COG2844 # Protein_GI_number: 15677076 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: UTP:GlnB (protein PII) uridylyltransferase # Organism: Neisseria meningitidis MC58 # 1 852 1 852 852 1610 94.0 0 MSANLSSALETFKQQRDAAEAHYLKANRVSVFFREYTAAVETLLAALWDKHFQNSGLCLM ATGGFGRGELYPYSDLDLAVVSSETVSDDLQEKIAAFVQDLWDMKLAPSVKSGSVDELCE SVRDDITGDTAFLEARFLFGNRQTADELTEKMNAQRNVAAFIEAKLVEMEHRHAKSQGSG AVLEPNIKSCPGGLRDIHTLLWIAKAQGLAANLPALVQQGILTRTEAGMLSHGYRRLAHI RIHLHLNAKRAEDRLLFDLQPQVAESMGYQGLNLRRQSEELMRVFYRAIKTVKQLSGILT PMLQSRVSSTPMRVTLRIDDDYIQVNNQIAARHTDIFFRRPEHIFKIVEIMQQRNDITAL EPQTLRAWWGATRKINRSFYQNPENRRRFAGFFRSGNGLTQTLRFLNLYGVLGRYLPAWE KIVGLLQHDLFHIYPVDDHILAVVRNVRRLALDMHSHELPYASALMQSFEKQDILYLAAF FHDIAKGRGGDHAIQGIADARQFAADHFLTEEESDLLVWLVENHLLMSTVAQKEDIQDPD VLDAFCKRVQTHERLSALYLLTISDIRGTNPKLWNAWRASLLESLFHAAGRYLAGNGGNP HALFGRRQQEAAELLTRAAVPEKQQKKLWNALGSAYFARHQSREILWHAANLVHDFETPI VRSRILPKSDSFQVMVFMPNGPRLFARLCRIFSRHGFDILAARAFITEHDYILDTFIVQI PSQHAPEDYPDIQSALEAELNSFIHGHTVAETQSHSRRISRRSRYMPIAPSITITPEEDY PDWYSVEITAVNRPFLLADMAEVFFAHNVSLRYAKISTLDERVEDSFIVFSPDLKNPKTQ SSLKQALLEQLSV >gi|257257226|gb|ACDX02000016.1| GENE 10 11401 - 11718 271 105 aa, chain - ## HITS:1 COG:NMA1375 KEGG:ns NR:ns ## COG: NMA1375 COG1396 # Protein_GI_number: 15794296 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Neisseria meningitidis Z2491 # 1 105 2 106 106 164 86.0 4e-41 MSNKLTPPAELPDEQDLRAVLAYNMRLFRVNKGWSQEELARQCGLDRTYVSAVERKRWNI ALSNIEKMATALGVAAYQLLLPPQELLNLMTNPSAAQQRSSENDI >gi|257257226|gb|ACDX02000016.1| GENE 11 12078 - 12650 922 190 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|218767988|ref|YP_002342500.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria meningitidis Z2491] # 1 190 1 190 190 359 96 2e-98 MTYEIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTA LIKLSLNSETKDVIVRDFQMHPFRREVQHIDFQAVKADQPVRIRVPLHIVNAESSQAVKL QGGRVSLLNTTVEVVALPANIPAYLDLDCAKVVAGDILHLSNIQLPEGVESVSLKRNENL AVATVTGKKR >gi|257257226|gb|ACDX02000016.1| GENE 12 12716 - 13699 702 327 aa, chain - ## HITS:1 COG:NMA1093 KEGG:ns NR:ns ## COG: NMA1093 COG0462 # Protein_GI_number: 15794041 # Func_class: F Nucleotide transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoribosylpyrophosphate synthetase # Organism: Neisseria meningitidis Z2491 # 1 327 1 327 327 592 97.0 1e-169 MATYDSLMVFTGNANPELAQRVVKHLDISLGEATVSKFSDGEIAVELMENVRGRDVFILQ PTCAPTNDNLMEILTMADALKRASAGRITAAIPYFGYARQDRRPRSVRVPISAKLVANML YSAGIDRVLTVDLHADQIQGFFDIPVDNIYATPILLNDIKQQRIENLTVVSPDIGGVVRA RAVAKSLNADLAIIDKRRPKANVAEVMNIIGDIQGRTCLIVDDMIDTANTLCKAAVALKE RGAERVLAYASHAVFSGEAVSRIASSEIDQVVVTDTIPLSEAAKQCDRIRQVTIAGLLAE TVRRISNEESVSYLFNEEVMTGSMLLP >gi|257257226|gb|ACDX02000016.1| GENE 13 13892 - 14149 233 85 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRRFESFLPSQIPLLGSRQAVKTLDFDSSMRRFESFLPSQHPLLGSRQAVKTLDFDSSMR RFESFLPSQIRACKFPYTLFYVENQ >gi|257257226|gb|ACDX02000016.1| GENE 14 14200 - 15045 493 281 aa, chain - ## HITS:1 COG:NMA1092 KEGG:ns NR:ns ## COG: NMA1092 COG1947 # Protein_GI_number: 15794040 # Func_class: I Lipid transport and metabolism # Function: 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase # Organism: Neisseria meningitidis Z2491 # 7 280 8 281 281 435 72.0 1e-122 MIPNEAQAFPAPAKLNLDLRITGKRADGYHNLESIFCLIDLCDTVYLKPRSDDLIILHTP TGDIPPEQDLAYRAASLLQKHTNSKLGVEIWLDKKIPTGAGLGGGSSDAATTLTVLNHWW ECGLSRQQLIDLGVTLGADIPFFLFGKNAFAKGIGEQLSPIDIPKQWYVIIKPKAHVSTP KIFSHGNLTRNSKPSIMPTFQSLQPFRNDMQAVVFQEYPEVWEAYCELSKYGSAIMTGSG ACVFLSTDSQQEANNIYQQVSQSYEAYCVEGLDIHPLFQMI >gi|257257226|gb|ACDX02000016.1| GENE 15 15073 - 15660 640 195 aa, chain - ## HITS:1 COG:NMB0873 KEGG:ns NR:ns ## COG: NMB0873 COG3017 # Protein_GI_number: 15676769 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane lipoprotein involved in outer membrane biogenesis # Organism: Neisseria meningitidis MC58 # 9 194 6 191 193 223 58.0 1e-58 MKQTNILSAAALTLLITACARPEFPQQNGWQPAETVNDFSAEGRIAVKLEGKGSYANFDW TYQNQVQTININTPIGSTVGQLCQDNQGVLAVDNKGRTYEAATAQELSNRLLGFELPIQY LHIWASGKRVADAPYQLLPGSRLQQFDWTISRTLNSNGKPKTLLLENPKLTLRLAFDNLD DHPEGNTQTQCAARK >gi|257257226|gb|ACDX02000016.1| GENE 16 15715 - 17574 1965 619 aa, chain - ## HITS:1 COG:NMB0872 KEGG:ns NR:ns ## COG: NMB0872 COG0457 # Protein_GI_number: 15676768 # Func_class: R General function prediction only # Function: FOG: TPR repeat # Organism: Neisseria meningitidis MC58 # 5 614 3 612 614 592 52.0 1e-169 MFLSPSHIRTLTAAVMLLFSAQTIAAKQESVPEVKIQSQTIQKKNRRTPEARLAEQERLI AANDRAWKVFTLLGGEMALQKGDAGMALGTYMHMLDRTKSPDVAERALEMAVSLNAFEQA ELIYQKWREIEPVPGAAQKRMTWLRDLLLGKNDKHLSGLDEVLAGATEEQNRRIFLLLAQ TAVQQPDLAEKASAQVHKETLKYPEMPEAAIADAIYSAYDGKKKNAIAALQRLAKLDSEI LPPTMLTLRLMAQRSPEILNGFFEQTDTRKLSSVWQELEITNLVANHRPDKAYSRLKTLL EDNPSPDLFIQAAILSSSRKDDLSVVNHYLEKAYQSGTSQQQSRAALIGAMTYADAKDYV KAKQWLGKINSADYIFDKTVLGASLEAEQGNGKAAWELAQRALKLPEQQGRFFGARELQR VSLFAIAKHDNPKKALSELNTLMVKASKQPDANQLLPDILYQRAMVYDKIGERDKAIADL RRQLEISPDSTSGMNALGYIMLSSPKYDLNEAFKLIQAAYQVEPENPAINDSLGWAYYLK GDAETALPYLQYAFEQYPDAEVASHLGEVLWKLGKQEDAKAVWTEGLKQEGDIGLLKETM RRFNIPVPPRKNHPSAKTK >gi|257257226|gb|ACDX02000016.1| GENE 17 17750 - 18367 272 205 aa, chain + ## HITS:1 COG:YPO1772 KEGG:ns NR:ns ## COG: YPO1772 COG0494 # Protein_GI_number: 16122026 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Yersinia pestis # 35 193 39 196 199 114 42.0 1e-25 MEMRQNDLVDFFGQAFRYASIAQEERNRFVRQEGKTAAVLLAVVRREEQWQIVLTRRADT LRHHTGQIAFAGGRSDEGDKDFIVTALRETEEETGIASHFWQVFPPLPPYYTPSGYEVHP VLALCPENPPTCVNSGEVAEIFYLPLDFALDMDNYSSRSFIYEGNMIATPVLPYLHYDIW GLTALILYGLAERYQYYCVDRKGIK >gi|257257226|gb|ACDX02000016.1| GENE 18 18562 - 19425 1133 287 aa, chain + ## HITS:1 COG:NMB0638 KEGG:ns NR:ns ## COG: NMB0638 COG1210 # Protein_GI_number: 15676538 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose pyrophosphorylase # Organism: Neisseria meningitidis MC58 # 1 286 1 286 289 519 88.0 1e-147 MRPIKKAVFPVAGMGTRFLPATKASPKEMLPIVDKPLIQYAVEEAVEAGCTEMVFITGRN KRSIEDHFDKAYELETELEMRQKDKLLEHVKDILPSNITCLYIRQAEALGLGHAVLCARA AVGDEPFAVILADDLIDAPKGALKQMVDIYNQSGNSVLGVETVDPSQTGSYGIVEVEKLN SFQRITNIVEKPKPEEAPSNLAVVGRYILTPRIFSLLENLPRGAGNEIQLTDGIARLLDH EFVLAHAFDGKRYDCGSKLGYLEATVAYGLKHPETGAQFRELLKQYS >gi|257257226|gb|ACDX02000016.1| GENE 19 19542 - 20285 1046 247 aa, chain + ## HITS:1 COG:NMA1016 KEGG:ns NR:ns ## COG: NMA1016 COG1187 # Protein_GI_number: 15793972 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Neisseria meningitidis Z2491 # 5 247 10 252 252 400 87.0 1e-111 MDNTSEETMRLSKRMAQLGLCSRREADSYIEQGWVKVNGQTAVLGQKVTERDRIDLNRQA HERQAERVTILLNKPVGYVSAQAEKGYKSAAELITADNRWESDDSHIPFSEKHKFGLAPA GRLDIDSVGLLVLTQDGRIAKQLIGENSGSEKEYLVRVRGKLDEKGLALLNHGLSLDGEK LRPAKVEWQNEDQLRFVLKQGKKRQIRRMCELVGLRVVGLKRIRMGKVKLGKLPPGKWRY LRADESF >gi|257257226|gb|ACDX02000016.1| GENE 20 20721 - 21638 1010 305 aa, chain + ## HITS:1 COG:NMB0735 KEGG:ns NR:ns ## COG: NMB0735 COG0382 # Protein_GI_number: 15676633 # Func_class: H Coenzyme transport and metabolism # Function: 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases # Organism: Neisseria meningitidis MC58 # 18 295 14 291 296 365 72.0 1e-101 MKIRRFLLHFLNRHAVARILVYGKLMRIDKPIGTLLLLWPTYWALWVASEGIPQADIFWA FTAGTFFMRSAGCVINDFADRNFDGSVERTKNRPFARGLVSKTEAILLTIILCLLAALCM TPLNLLTWVMSVPALFLAMTYPFTKRFFPLPQFYLGLAFSFGIPMAFAAVRGGVPSTAWL MFTANALWTLAYDTIYAMADKEDDLKIGIKTSAITFGDHDISASMLCHFWFTALMAVLGV KIGATWLYWIMLPAVVWLQIGQYHAIKTRDRQTCFKVFLDNNHIGLLWFLGLSGHYLWTV AATRL >gi|257257226|gb|ACDX02000016.1| GENE 21 21922 - 22371 535 149 aa, chain + ## HITS:1 COG:NMB0736 KEGG:ns NR:ns ## COG: NMB0736 COG1762 # Protein_GI_number: 15676634 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Neisseria meningitidis MC58 # 1 149 1 149 149 239 85.0 2e-63 MSLIGEILPLSHIVLDLEVGSKKRLFEEAGLLLEHEAELPHGDVFDCLFAREKLGSTGLG QGVAIPHGRHACVKKATGAFIRTKEPVAFDAPDGKPVSLIFTLLVPENATGEHLEVLSKL AGRFSQKAVREALMSATSAEEVRKLLAEE >gi|257257226|gb|ACDX02000016.1| GENE 22 22375 - 23337 1132 320 aa, chain + ## HITS:1 COG:NMA0947 KEGG:ns NR:ns ## COG: NMA0947 COG1493 # Protein_GI_number: 15793905 # Func_class: T Signal transduction mechanisms # Function: Serine kinase of the HPr protein, regulates carbohydrate metabolism # Organism: Neisseria meningitidis Z2491 # 1 320 1 320 320 586 92.0 1e-167 MPSISVRRLFSDNQHKLQLAWAAGNSGADNRIGVEADKPVLALVGHLNFIHPNQIQVVGV AEAEYLKRLESGELNYDFGELFDIPMSLVIVANGLAVSPKLRDYCHKNDIPLLTSKLESP YLMDVLRIYLQRTLATSIVKHGVFLDVFEVGVLITGHSGLGKSELALELISRGHSLIADD AVELFRTGPETLEGRCPPMLRDFLEVRGLGILNIRHIFGETSIRPKKILQLIINLAAADD DYMKQLDRLSIRTETESILNVNVRSVTLPVAVGRNLAVLVEAAVRNYILQLRGKDSTKEF LERHQTQLKENEQNHENRPD >gi|257257226|gb|ACDX02000016.1| GENE 23 23318 - 24172 1309 284 aa, chain + ## HITS:1 COG:NMB0738 KEGG:ns NR:ns ## COG: NMB0738 COG1660 # Protein_GI_number: 15676636 # Func_class: R General function prediction only # Function: Predicted P-loop-containing kinase # Organism: Neisseria meningitidis MC58 # 1 284 1 284 284 488 83.0 1e-138 MKIVLISGLSGSGKSVALKQLEDLGYFCVDNLPLEMLPSLVLHHIERADETKLGVSVDVR SGINIQEAQEQIQYLRDEGHQVEVLFVEAEESVLVRRFSETRRGHPLSGLSLTLLESLQK EREWLFPLKDIAYCIDTSKMNAQQLRYAVQQWLNIERRGLLVILESFGFKYGVPNNADFM FDMRSLPNPYYDPELRPYTGMDAPIQEYLDQQPLVQEMVDDIDHFMNHWLPRLQKESRSY VTIAIGCTGGQHRSVYVVEKLAQRLQGHYELLVRHRQAHNLSGR >gi|257257226|gb|ACDX02000016.1| GENE 24 24321 - 24551 526 76 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261365436|ref|ZP_05978319.1| ## NR: gi|261365436|ref|ZP_05978319.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 76 1 76 76 111 100.0 2e-23 MKHIITLALACTLAACATEIPAYRWHRTGASESEVSRQINVCKSQAQHDAKHGRESKSLE QCMDEAGYYRYERGNL >gi|257257226|gb|ACDX02000016.1| GENE 25 24706 - 25647 1542 313 aa, chain + ## HITS:1 COG:NMB0739_1 KEGG:ns NR:ns ## COG: NMB0739_1 COG1161 # Protein_GI_number: 15676637 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Neisseria meningitidis MC58 # 1 309 1 309 342 592 97.0 1e-169 MAIQWFPGHMNKAKKAIAERTKSVDMVIEMLDARMPASSENPLLAQLSKGKPKLKILNKQ DLADPERTKIWLEHYNSRPDTRAIALDSSETGAHGKITQACRAMIPHRHGIDKPLRVLIC GIPNVGKSTLINGMIGKKSAKTGNEPGITKAEQRLFLADDFWLYDTPGMLWPKIIVEEGG YNLAAGGAVGRNALDEEEVALELLDYLRRHYLPMLQERYQADKGSSSHWDDNSWLEWIAK KRGAVLSGGRVNYQKAAENILTDFREGKIGRITLETPNQWETWLKKARQKEAELKAIREA RKAERKGQKPADE >gi|257257226|gb|ACDX02000016.1| GENE 26 25816 - 26961 1283 381 aa, chain + ## HITS:1 COG:NMB1530 KEGG:ns NR:ns ## COG: NMB1530 COG0624 # Protein_GI_number: 15677382 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Neisseria meningitidis MC58 # 1 381 1 381 381 761 96.0 0 MTDTQSLELAKELISRPSVTPDDRDCQKLLAERLHKIGFAAEELHFGNTKNIWLRRGTKA PVVCFAGHTDVVPTGPVEKWDSPPFEPTERDGRLYGRGAADMKTSIACFVTACERFVAEH PDHQGSIALLITSDEEGDALDGTTKVVDVLKARDELIDYCIVGEPTAVDKLGDMIKNGRR GSLSGNLTVKGKQGHIAYPHLAINPAHTFAPALLELTQEVWDEGNEYFPPTSFQISNING GTGATNVIPGELNVKFNFRFSTESTEAGLKQRVHAILDKHGVQYDLQWSCSGQPFLTHAG KLTDVARAAIAETCGVETELSTTGGTSDGRFIKAIAKELIELGPSNATIHQINENVRLDD IPKLSAVYEGILARLLAEKAV >gi|257257226|gb|ACDX02000016.1| GENE 27 27181 - 27528 291 115 aa, chain + ## HITS:1 COG:no KEGG:ACIAD1223 NR:ns ## KEGG: ACIAD1223 # Name: not_defined # Def: hypothetical protein # Organism: Acinetobacter_ADP1 # Pathway: not_defined # 1 113 1 113 116 151 61.0 1e-35 MKYDNFFFPADDLAASCSFYQDVLDLPVKFDFSENGMVAFQVGDEEAAIILKERKKFPDM TPTVWIEVEDVQAKYAALQGRNIRFLSEPFRIRTGWAVEFIDPSGNRLGFVDYRE >gi|257257226|gb|ACDX02000016.1| GENE 28 27604 - 28413 871 269 aa, chain + ## HITS:1 COG:NMB1528 KEGG:ns NR:ns ## COG: NMB1528 COG0350 # Protein_GI_number: 15677380 # Func_class: L Replication, recombination and repair # Function: Methylated DNA-protein cysteine methyltransferase # Organism: Neisseria meningitidis MC58 # 8 269 16 269 269 429 84.0 1e-120 MPPFIVNRSIPMITLPSLNDLPSKWNEIRERLETDFSECEACLWYDLEALLHERFTEHEA KQFEQDFIDRIGCASEEYVRIRRAIRLLEARYPDSPNELTTAAIATPLGEMLAVFGGKGL CLLEFVGQKHMEQEITAVQKALRGRFVFREDERTQLLRQELDLYFKGRLKTFATPLEQIG TEFQKQAWDALLAIPYGETRSYKEQAQRLGNPKAVRAVAAANGQNKVSILIPCHRVIGSD GKLTGYAGGLNRKQSLLALERSEVQTTLF >gi|257257226|gb|ACDX02000016.1| GENE 29 28698 - 29699 1331 333 aa, chain + ## HITS:1 COG:NMB1573 KEGG:ns NR:ns ## COG: NMB1573 COG0078 # Protein_GI_number: 15677423 # Func_class: E Amino acid transport and metabolism # Function: Ornithine carbamoyltransferase # Organism: Neisseria meningitidis MC58 # 3 333 1 331 331 609 93.0 1e-174 MNMNLKNRHFLKLLDFTPEEITAYLDLAAELKAAKKAGREVQRMKGKNIALIFEKTSTRT RCAFEVAARDQGAGVTYLEPSASQIGHKESIKDTARVLGRMYDGIEYRGFGQDVVEELAK YAGVPVFNGLTNEFHPTQMLADALTMREHSGKPLSQTAFAYVGDARYNMANSLLVLGAKL GMDVRIGAPKTLWPSEHIVARARAVAEETGGKILLTENAEEAVKGVDFIHTDVWVSMGEP KEAWQERIDLLKDYRVTPELMAASGNPQVKFMHCLPAFHNRETKVGEWIYETFGLNGVEV TEEVFESPASIVFDQAENRMHTIKAVMVAALGD >gi|257257226|gb|ACDX02000016.1| GENE 30 29969 - 31687 2641 572 aa, chain - ## HITS:1 COG:NMB1506 KEGG:ns NR:ns ## COG: NMB1506 COG0018 # Protein_GI_number: 15677359 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Arginyl-tRNA synthetase # Organism: Neisseria meningitidis MC58 # 1 572 1 572 572 1066 96.0 0 MNLHQTVELEAAAAFAAAGITDSPVVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQK VAEALAGNAVIESAEVAGPGFINLRLRPEFLAQNIHTALNDTRFGVAKTDKPQTVVIDYS SPNLAKEMHVGHLRSSIIGDSISRVLEFMGNTVVRQNHVGDWGTQFGMLVAYLVEQQKDN AAFELADLEQFYRAAKVRFDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQA VYDTLGLKLRPEDVAGESKYNDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKDGEPAA FIVQKQGGGFLYASTDLACLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPED AKAEFIGFGTMMGKDGKPFKTRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIG KTVGIGAVKYADLSKNRTSDYVFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKAGEWDVTA PTVLTEPLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQTATLFSRFYEACPILKSEG ATRNSRLQLAKLTGDTLKQGLDLLGIDVLDVM >gi|257257226|gb|ACDX02000016.1| GENE 31 31858 - 32667 1202 269 aa, chain - ## HITS:1 COG:NMA1533 KEGG:ns NR:ns ## COG: NMA1533 COG0730 # Protein_GI_number: 15794426 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Neisseria meningitidis Z2491 # 1 268 1 268 268 335 73.0 4e-92 MWTWDIIFSLLAVGSAAGFIAGLFGVGGGTLIVPVVLWTLQLQGINGHPYAQHLAIGTSF AVMVFTTFSSMYAQHKKRAIDWQTVRRMTPSMIFGVLIGAVTAKYMPTRALQIFFIAFLT LIALKTLADSKPKASRHLPALPGLSAVGTLFGAASSWVGIGGGSLSVPFLMYCNFPAHRA IGTSSGLAWPIALAGTIGYLVTGWNIPNLPHGSGGFLYLPAVAILSIATMIFAPLGVKTA HKLPARQLKISFGIMLLLIAIKMAWNLVR >gi|257257226|gb|ACDX02000016.1| GENE 32 32671 - 33309 734 212 aa, chain - ## HITS:1 COG:NMA1532 KEGG:ns NR:ns ## COG: NMA1532 COG1183 # Protein_GI_number: 15794425 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine synthase # Organism: Neisseria meningitidis Z2491 # 1 207 40 246 248 350 92.0 7e-97 MHGRYETAAIAVFLSMLLDGMDGRVARLTNSQSAFGEQLDSLADMVSFGVAPALIAYKWQ LWQFGKIGYSVAFIYCACAALRLALFNTLIGKVDKRWFIGVPSPTAAALIVGLIWVNHSI ERFPGVHWWALGITLFAGISMIVQIPFWSFKEINIRRQVPFMGMVLAVLVLLLINWKPSL VLFLFFLGYSLSGYIMAVWRWLKKRRKTKKVA >gi|257257226|gb|ACDX02000016.1| GENE 33 34000 - 35349 1806 449 aa, chain - ## HITS:1 COG:NMB1363 KEGG:ns NR:ns ## COG: NMB1363 COG1570 # Protein_GI_number: 15677228 # Func_class: L Replication, recombination and repair # Function: Exonuclease VII, large subunit # Organism: Neisseria meningitidis MC58 # 1 449 1 449 451 770 90.0 0 MSELFAPSSISVSELNALAKALLEDHLAGLWIAGEVSNLTRAASGHYYFSLKDSRAQVRC AMFKGAAARLAKPLKEGDHIEVAGKISIYEARGEFQITVNEVRLKGLGQLYEAYERLKAQ LQAEGAFAAERKKPLPARAQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPTAVQGAG SEFQIAQAIKTASQRAECDVLIVCRGGGSIEDLWAFNEEPVVRAIEACAIPVASGVGHET DFTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAQGRLKTVLEQRYFDASQKLDWLA RQIRHPRQKLDEQRTYIQKLAQTLSYSMTQNVRAHTARFERQTQALKHCRPDISVYRQDI DRFQTTLSHAFRQLLAQRRQSLTAQTALLEAVSPQQILERGFSVVKNTRGQVIRNANALK QGQKLHIIFAEGETDVRVTKEQAQRELFD >gi|257257226|gb|ACDX02000016.1| GENE 34 35462 - 36481 446 339 aa, chain + ## HITS:1 COG:NMB0672 KEGG:ns NR:ns ## COG: NMB0672 COG1663 # Protein_GI_number: 15676570 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Tetraacyldisaccharide-1-P 4'-kinase # Organism: Neisseria meningitidis MC58 # 3 335 6 338 344 568 88.0 1e-162 MPKLHQIIERHWQRPNPFLSLLLKPLSKLFAKIAAKRRDDFVSGRLKSEKLPVPVVVVGN IHAGGTGKTPMVAALVSGLQEKGVKVGIISRGYGRKSKAVHVLNAASRAEDAGDEPLLLF RKTGAPTAVGSSRAEAGRALLAAHPDIGLIVADDGLQHYALRRDVEIAVFPAADTGRTDL DLLPNGSLREPLSRLDSVDAVVISGGKADASFAPSENMFHSRIETGQIYRLNQPSEILDT GRLKNQTVAAVAGIAKPERFFDSLRNMGITLNQTVALPDHADIAAADLPDADAVIITEKD AVKFSDDLNLNHVWVLPVCAIIEPDLATFVSEMLKSKCL >gi|257257226|gb|ACDX02000016.1| GENE 35 36593 - 37201 414 202 aa, chain + ## HITS:1 COG:NMA0873 KEGG:ns NR:ns ## COG: NMA0873 COG3184 # Protein_GI_number: 15793842 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 2 113 23 134 195 62 31.0 5e-10 MAAKPSDESAMKWLEIQGIGRNYPEKVQRSLEAVNKEDHERLLAMTPKAQKAQMKALISR YMKNMQEDLSRPELKKQWLDEEKRAVQKVFTQEEVDVTNRFFSSAQGKNILKKIRSFQQH GGNLDDVLSQSDIEKMAEAFGHGAGKSALEKVKHFDKLSDEIIQKNMSQNYLNASDKYTP AFEEQAHGILCKGNKNLPKCAK >gi|257257226|gb|ACDX02000016.1| GENE 36 37251 - 37826 578 191 aa, chain + ## HITS:1 COG:NMA0873 KEGG:ns NR:ns ## COG: NMA0873 COG3184 # Protein_GI_number: 15793842 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 182 3 185 195 120 37.0 2e-27 MKLKTLLLPFAALALCANAFAATPSDASLERLFEVQKMDALLDQSFQSMERIVLSDPNVQ KFLKDAPEDKRPQLEAVLKKYANQSIAEINTPQVRAQLRKATLDGMKTVYTQEEVNALIG FYSTAVGQSIMDKTPRYLEATIKPMMDILAGKYTQSNQSANLRREIRQIMCNGKNPAQAC AKQPNKPARKK >gi|257257226|gb|ACDX02000016.1| GENE 37 37921 - 38103 308 60 aa, chain + ## HITS:1 COG:NMA0874 KEGG:ns NR:ns ## COG: NMA0874 COG2835 # Protein_GI_number: 15793843 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 1 60 1 60 60 107 100.0 7e-24 MEKKFLDILVCPVTKGRLEYHQDKQELWSRQAKLAYPIKDGIPYMLENEARALSEEELKA >gi|257257226|gb|ACDX02000016.1| GENE 38 38100 - 38861 972 253 aa, chain + ## HITS:1 COG:NMB0675 KEGG:ns NR:ns ## COG: NMB0675 COG1212 # Protein_GI_number: 15676573 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: CMP-2-keto-3-deoxyoctulosonic acid synthetase # Organism: Neisseria meningitidis MC58 # 1 253 1 253 253 440 94.0 1e-123 MTEFVVLIPARLDSSRLPGKALADIHGKPMVVRVAEQAAKSKAARVVVATDHPDIQTACQ AHGVEVVMTSNRHESGTTRLAEAAAALKLPQHLVVVNVQGDEPLIAPELIDRTAEVLVEN NVQMATAAHELHDFDEFMNPNVVKVVLDKNRNAIYFSRAPIPYPRDAMRAEKRELPAETA VLRHIGIYAYRAGFLQRYAEMSVSPLETIESLEQLRVLWHGYPIAVETAKEAPAAGVDTQ EDLDRVRAAFEVV >gi|257257226|gb|ACDX02000016.1| GENE 39 38974 - 39639 473 221 aa, chain + ## HITS:1 COG:no KEGG:ACIAD1306 NR:ns ## KEGG: ACIAD1306 # Name: not_defined # Def: putative signal peptide # Organism: Acinetobacter_ADP1 # Pathway: not_defined # 3 206 2 212 229 172 42.0 1e-41 MKRSILIFLSCIALPVCAADFSAYVPKGWKIIKSVKGDLNGDNQADAVLVLQKQDKANII PKDSMGLPELDTNPRMLKVLFKQADGYKTAVENTTLIPPESDKDNGCLDDPFSDVSIDKG RLKVSLQWFYSCGSWWMGDSAYLFRYQNDRFLLIGYTNSQHNRASGEIEEYSDNYLTGKR KRTTGGNVFDSSEDHPKVKWERFKKKPYHLDEPYRHPRAER >gi|257257226|gb|ACDX02000016.1| GENE 40 39733 - 40251 669 172 aa, chain + ## HITS:1 COG:no KEGG:NLA_15650 NR:ns ## KEGG: NLA_15650 # Name: not_defined # Def: hypothetical protein # Organism: N.lactamica # Pathway: not_defined # 5 167 9 171 171 238 77.0 1e-61 MTDLRHLSRKEQKLLADVALLVQNDDQEFNYEMLKAAAPDEASGEFWFRMAETLSTLPPN RSLDLRLNGGRLTVAVSILSVLLQDNPEVPQLWAQKVIALNYLAHGHQTRALGLAQQADK AAEANEEEYLAKTLSQNLLSTLKDALERFPEDTWFAEMRDDAWKHFGAEQVV >gi|257257226|gb|ACDX02000016.1| GENE 41 40334 - 40981 1101 215 aa, chain + ## HITS:1 COG:NMA1032 KEGG:ns NR:ns ## COG: NMA1032 COG0563 # Protein_GI_number: 15793988 # Func_class: F Nucleotide transport and metabolism # Function: Adenylate kinase and related kinases # Organism: Neisseria meningitidis Z2491 # 1 215 1 215 215 396 99.0 1e-110 MKVLLLGAPGAGKGTQAQFITAAFGIPQISTGDMLRAAIKAGTPLGLEAKKIIDEGGLVR DDIIIGMVKERIAQDDCKNGFLFDGFPRTLAQAEAMVEAGVDLDAVVEIDVPDSVIVDRM SGRRVHLASGRTYHVTYNPPKVEGKDDVTGEDLIQRDDDKEETVKKRLAVYHEQTEVLVD FYSKLEGEHAPKYIKVDGTQPVEAVKAEVLGALGK >gi|257257226|gb|ACDX02000016.1| GENE 42 41353 - 42093 942 246 aa, chain + ## HITS:1 COG:NMB0824 KEGG:ns NR:ns ## COG: NMB0824 COG0284 # Protein_GI_number: 15676722 # Func_class: F Nucleotide transport and metabolism # Function: Orotidine-5'-phosphate decarboxylase # Organism: Neisseria meningitidis MC58 # 1 246 1 246 246 448 97.0 1e-126 MNPLITDFQTPQQRPPVIVALDFANEKDTLGFVRNLDPALCQIKIGKELFTATGRSLAES LIHQGFKLFLDLKYHDIPHTVAQACKVAADMGVWMVDMHASGGRRMMEAAAEAVAGYGTK PLLIGVTVLTSMEQSDLAEIGLNIAPEEQVIRLAKLAQSSGLDGVVCSAQEAAPLRRELG QDFVLVTPGIRLDVAGNNDDQRRIMTPAEALAAGSTYLVMGRPVTQAADPVAVLREVNRV ANLEAN >gi|257257226|gb|ACDX02000016.1| GENE 43 42148 - 43110 1433 320 aa, chain + ## HITS:1 COG:NMB0825 KEGG:ns NR:ns ## COG: NMB0825 COG2870 # Protein_GI_number: 15676723 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase # Organism: Neisseria meningitidis MC58 # 1 320 1 320 323 590 95.0 1e-168 MPTKFQQETLKSRFAQAKVLVVGDVMLDRYWFGDVSRISPEAPVPVAKIGRIDQRAGGAA NVARNIASLGGKAGLLSVTGDDEAANALDALMAQDGVTSYLMRDKQIATTVKLRVVARNQ QLIRLDFEEHPNREVLEQIKQRYREILPEYDAIIFSDYGKGGLSHISDMIDWAKHAGKTV LIDPKGDDYEKYAGATLITPNRAELKEVVGSWKNESELTEKAQNLRRHLDLTAVLLTRSE EGMTLFSEGEPIYQPTRAQEVYDVSGAGDTVIAGVGLGLAAGYTMPEAMHLANTAAGVVV AKLGTAVCSFAELNKALEEQ >gi|257257226|gb|ACDX02000016.1| GENE 44 43152 - 44387 340 411 aa, chain + ## HITS:1 COG:NMB0826 KEGG:ns NR:ns ## COG: NMB0826 COG0270 # Protein_GI_number: 15676724 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Neisseria meningitidis MC58 # 1 411 1 411 411 806 95.0 0 MTISTMAQTHDTQLQKTLLFPSQQGWQSKTFLKPNSHIRLATVFSGIGAVEQAFYRLNLN HTIVFAGDIDPHVKKSYLGNYQLDEGFWHDDITQFDARKFRNQVDILVGGSPCQAFSMVG KRAGLEDTRGTLFYEFARVVDEVQPKIFIYENVKGLLNHDNGKTWEVVKSVFHSLGYDLY FQIMNSKDYGIPQHRERIFVVGFHTPPTNGFQFPEKIELEHTMQDFLEDYTDSKYFLREK GVKFVTSSKNRQKRYTQINGEIALCQKANQQFNWHGDFIFQAAREFEFDDFIFDVNSVEE KYYLSEKIKNYVLAGGTKNFKTSTETDLPVARPLLQTMHKMHRAGVDNYVTHNRGRIRKL TPRECLRLMGFRDDFKILVSDTQMYRQAGNSIVVDVLIAILKQMDITRYGE >gi|257257226|gb|ACDX02000016.1| GENE 45 44389 - 45507 175 372 aa, chain + ## HITS:1 COG:NMA1036 KEGG:ns NR:ns ## COG: NMA1036 COG3440 # Protein_GI_number: 15793992 # Func_class: V Defense mechanisms # Function: Predicted restriction endonuclease # Organism: Neisseria meningitidis Z2491 # 1 372 1 372 372 695 95.0 0 MSDFQRITIENIEYFIVDSIQNLRAEDSFIHRNNKLSVFGGNGEARKYVGSYIDDSGRKL STFFEYKNWGITETKNGRRVEYPIIQKNCFFNKKNLQRYLVDAKVEYQKQEQKYHNDISR FYDDYVLSIDNLPTENIFFSIHDVSDHLNNSKGYRRGYIRSEDDIWSIWRKIVLPKISYL SILKLLPVEGIEDSEPLFYFRIFLDYQFRSIVHPQLLSREKLEIPALEADQSVEQEIIKQ KSRKGQQKYRKDVINYMPQCPFTLITDEILLRASHIKPYMVCITEKNEKEALDYLNGLAL TPTYDWLFDQGYITFLDDGRLICGTRLSRYTWEKLNINPNAKNKMRIYPEGREKYLEYHR KFVFQDNIDDFL >gi|257257226|gb|ACDX02000016.1| GENE 46 45548 - 46552 1682 334 aa, chain + ## HITS:1 COG:NMB0828 KEGG:ns NR:ns ## COG: NMB0828 COG0451 # Protein_GI_number: 15676725 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Neisseria meningitidis MC58 # 1 334 1 334 334 658 96.0 0 MTIIVTGAAGFIGSNIVKALNQRGITDIVAVDNLTRGEKFKNLAECEIAHYLDKHEFIRQ VRGHLLPYENIEAVFHQGACSDTMNHDGLYMMDNNYQYTLDLLDWCQDERIPFLYASSAA VYGKGEIFREERELEKPLNVYGYSKFLFDQVLRRRMKEGLTAQVVGFRYFNVYGQHEQHK GRMASVAFHHFNQYRENGYVNLFGANDGYGNGEQTRDFVSVEDVAKVNLYFFDHPNLSGI YNLGTGRSQQFNELAAATVNACRAAEGKPEMSLKELVEEELIRYVPFPDALKGKYQSFTQ ADITKLREAGYKEEFLDVKAGVDRYVKWMLENLA >gi|257257226|gb|ACDX02000016.1| GENE 47 46634 - 47821 1609 395 aa, chain - ## HITS:1 COG:NMB0894 KEGG:ns NR:ns ## COG: NMB0894 COG0436 # Protein_GI_number: 15676790 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Neisseria meningitidis MC58 # 1 395 1 395 395 716 85.0 0 MNPLLDQLQPYPFARLREAMQGVNPPEGVTPVPLHIGEPKHPTPEVITNALTSSLHELEK YPLTAGLPELRQACADWLQRRYDGLTVNPDIEILPVLGSREALFSFVQAVLNPVSDDLKP VVLSPNPFYQIYEGAAILGGGEIRFANCPAPSFKPDWKSIAEDVWQRTKVMFVCSPNNPS GSVLQLADWQEIFDLQDKYGFIIASDECYSEIYFDGNKPIGGLQAAAQLGRSNRNIVMFT SLSKRSNVPGLRSGFVAGDAELLKNFLLYRTYHGSAMSIPVQRASIAAWNDEEHVIANRC LYQEKFDRVIPILQQVFDVELPDASFYIWLKVPDGDDLAFAKNLWQKAAIQVLPGRFLAR DTECGNPGEGYVRIALVADVDSCVKAAETIVSLYR >gi|257257226|gb|ACDX02000016.1| GENE 48 48027 - 49196 1319 389 aa, chain - ## HITS:1 COG:NMA1666 KEGG:ns NR:ns ## COG: NMA1666 COG2070 # Protein_GI_number: 15794560 # Func_class: R General function prediction only # Function: Dioxygenases related to 2-nitropropane dioxygenase # Organism: Neisseria meningitidis Z2491 # 1 387 1 387 391 706 90.0 0 MQSNFDPLLIRGKSLIPVVQGGMGVGVSASKLSSAVARENGVGTIASVDLRHLHDDLLAE SKINPSEEKYTQLNCTALDREIQKAKADANGKGMIAVNVMKAVKDHAAYVRQACESGADA IVMGAGLPLDLPEMTEGYHKDVALFPILSESRGIGIVLKRWMKKGVLPDAIVIEHPAHAA GHLGAASVAGVNDAKFEFKRVIEETFEVFKNLGLESEKIPLILAGGMANFEKVKTALKNW GASAVQIGTAFAVTEEGDAHINFKKTLAGAETEHVVEFMSVAGLPARGVRTKFLDSYIKR ESKLQANAKADPRRCTQGLNCLTSCGLRDGLAKAGQFCIDIQLSAAFRGEVDKGLFFRGK DPLPFGNTIRTVHETIQYLLNGALPAAAK >gi|257257226|gb|ACDX02000016.1| GENE 49 49518 - 50444 1458 308 aa, chain - ## HITS:1 COG:SSO2747 KEGG:ns NR:ns ## COG: SSO2747 COG2017 # Protein_GI_number: 15899462 # Func_class: G Carbohydrate transport and metabolism # Function: Galactose mutarotase and related enzymes # Organism: Sulfolobus solfataricus # 67 302 46 262 262 107 31.0 3e-23 MFTLKTDNDRLLLASPDLRAEIYLYGGLLNRYEIRRPDGTWFNIVKAYDTPQHARESLTE WFRSGKLSPYACRLRHGKYSFDGKAYQCGKFKLAEHAAHGLMYDREFALVNSHADSQSAE VEIRADYAQDDSGYPFPFSLTVRYRLSADGLSIRSTVRNQGATAMPLADGWHPYFTLGGK TDDWSLEIDSSKRLGFDADLVPDGSMIDDTRFQTTSNLAGIELDNSFVLARSKPAACTLS GNGLTLSIYPDASYPYLQIFTPSTRDTIAIENLSGAPDCFNNGLGLIKLDAGEEAAFETR YHIAANRP >gi|257257226|gb|ACDX02000016.1| GENE 50 50519 - 51565 1636 348 aa, chain - ## HITS:1 COG:NMB1361 KEGG:ns NR:ns ## COG: NMB1361 COG1187 # Protein_GI_number: 15677226 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Neisseria meningitidis MC58 # 1 348 2 350 350 601 94.0 1e-172 MSKQPTSKRQWRDGAAASKKTAKPFKSKSRPKDETRKAASQPYGQKVSDDLKPQNAPKQR AAKARKLVVRNPNQKIMERARDLKERRSDLSRMEPERLQKVLAASGVGSRREMEEWINNG WVTVNGKTAQLGDKVTPDDHVTVKGSIIKLKWADRLPRIILYYKQEGEIVSRDDPQGRVS IFDRLPQAASSRWVAIGRLDINTSGLLILTTSGELVQRFAHPSFEVEREYAVRVLGGLTT EQMRSLTEEGVMLEDGLAKVERIYEQGGEGANKWYNVVIKEGRNREVRRIFESQGLTVSR LVRVGFGPIGLPNRLKRGQFYELNPAEVANIIKWADMLLPGERRRKKS >gi|257257226|gb|ACDX02000016.1| GENE 51 51751 - 52383 833 210 aa, chain - ## HITS:1 COG:NMA1572 KEGG:ns NR:ns ## COG: NMA1572 COG0259 # Protein_GI_number: 15794465 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxamine-phosphate oxidase # Organism: Neisseria meningitidis Z2491 # 1 210 1 210 210 330 81.0 2e-90 MDLHNIREDYSKRELSESECHADPIVQFEQWLNEAIHSQVNEPTAVNVASVGEDGRPNSR MVLLKEVNPQGFVFFSNYLSRKGRSFDAHPFAAMTFFWPELERQVRVEGRIEKLDAAASD EYFDSRPYTSRIGAWASAQSEVLSSKAMLVAKAAAVGAKHPLHVPRPPHWGGYLVIPDRI EFWQGRPSRLHDRIQYRLVDGNWIRERLSP >gi|257257226|gb|ACDX02000016.1| GENE 52 52506 - 52958 910 150 aa, chain + ## HITS:1 COG:NMA1112 KEGG:ns NR:ns ## COG: NMA1112 COG0756 # Protein_GI_number: 15794059 # Func_class: F Nucleotide transport and metabolism # Function: dUTPase # Organism: Neisseria meningitidis Z2491 # 1 148 1 148 150 236 77.0 1e-62 MQTEVELKILNPKMADKLPAYATPGSAGLDLRACLDEAVTLQPGDTYLVPTGLAVHLANP DYAAVLLPRSGLGHKYGIVLGNLVGLIDSDYQGELKVSVWNRGKEAFTIEPLERIAQMVI VPVVQASFKVVDEFAASERGEGGFGSTGKA >gi|257257226|gb|ACDX02000016.1| GENE 53 53125 - 54516 324 463 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 5 462 1 435 447 129 26 4e-29 MAETMKKQADSPDLVYGLEDKPPFGNALLSAITHLLAIFVPMITPALIVGGALELPVEMT AYLVSMAMVASGVGTYLQVNRFGPVGSGMLSIQSVNFSFVTVMIALGAGMKEGGLTKDAM ISTLLGVSFVGAFLVCFSAWLLPYLKKVITPTVSGVVVMLIGLSLVHVGITDFGGGFGAK ANGTFGSMENLGLALLVLLIVLIFNCMKNPLLRMSGIAVGLIVGYIVALFLGKVDFSALQ NLPLVTLPVPFKYGFAFDWHAFIVAGAIFLLSVFEAVGDLTATAMVSDQPIEGEEYTKRL RGGVLADGLVSVIATALGSLPLTTFAQNNGVIQMTGVASRHVGKYIAVILVLLGLFPVVG RAFTTIPSPVLGGAMVLMFGLIAIAGVRILVSHGIRRREAVIAATSVGLGLGVAFEPEVF KNLPVLFQNSISAGGITAVILNLLLPEDKTDKVVKIDTEGLEH >gi|257257226|gb|ACDX02000016.1| GENE 54 54637 - 55551 398 304 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261365467|ref|ZP_05978350.1| ## NR: gi|261365467|ref|ZP_05978350.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 304 1 304 304 607 100.0 1e-172 MIKNKKIILAILTSVILFSIYFFNNYRIFFSPFEILSNKTIEQNLQGICVDEGRKLSKEE LLRRALVSYFTHESTGQYFDDPSDYAWKDRCPTEKSCQLYMMPAIEMGDYIFDKEKRISL LKARNNGVTFSKADQFFPKNVRYQSHKLPFGFYASNRFNSFYPYDCCGIKEKSELLKSDY PFNGTPDLLEQRGLGNYFLDLKIVSEKINVYYHRYIINNCGQYIPDKYSSIQGNYTKYMM TSYGFYLPQDFIQTVPEIPIGCWKWNHSKPDDSTINTLTKSFDYMFHYQTLWDGNDFYSC PKKP >gi|257257226|gb|ACDX02000016.1| GENE 55 56103 - 56501 66 132 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261365468|ref|ZP_05978351.1| ## NR: gi|261365468|ref|ZP_05978351.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 132 49 180 180 255 100.0 9e-67 MVIGFVLMFGDELIGEIQMKNICNSNKMVFVFPVKDFKHKDLIELDSKYLKLQGSAVPVR YYVRKYGSDDKKIYIISKSYMASGGWVSRLNESVIGSSIGPMWISDWNKHCNSMDYKRLK DLYDVKIINLDN >gi|257257226|gb|ACDX02000016.1| GENE 56 56516 - 56716 227 66 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261365469|ref|ZP_05978352.1| ## NR: gi|261365469|ref|ZP_05978352.1| hypothetical protein NEIMUCOT_05926 [Neisseria mucosa ATCC 25996] hypothetical protein NEIMUCOT_05926 [Neisseria mucosa ATCC 25996] # 1 66 1 66 66 112 100.0 7e-24 MNQIQEIYISSLLADAVYTDIQKLRNNSARDNMEDIMTERMSSYQAKFIANNFEIRPLAK IFIPLH >gi|257257226|gb|ACDX02000016.1| GENE 57 56700 - 57020 399 106 aa, chain - ## HITS:1 COG:SP1928 KEGG:ns NR:ns ## COG: SP1928 COG3293 # Protein_GI_number: 15901752 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 5 103 24 124 129 81 47.0 3e-16 MGAQHDMRLARRHLTELYPYKIVIADKGYQGLAKTGLQTPKKKSKHHLLNKQDKEANRRL GKLRTVIEHINRKLKIFKILSLPYRNRRKRFGLRANLIAGLINAMG >gi|257257226|gb|ACDX02000016.1| GENE 58 57076 - 57492 350 138 aa, chain - ## HITS:1 COG:no KEGG:Aasi_1471 NR:ns ## KEGG: Aasi_1471 # Name: not_defined # Def: hypothetical protein # Organism: A.asiaticus # Pathway: not_defined # 12 128 25 147 157 96 48.0 3e-19 KYENLIQRSDREFKRLTGVTPVLFHEMLQITTEAESRKVKSGRPHTLSLADQLLLTLSYL RHYHTQLELAAIYGLSESNVCRTIRKTEDALIRCKRFSLPKHKNPGDHTVIIDVTESPIE RPKKTAAVLQRQEKAAHG Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:12:30 2011 Seq name: gi|257257225|gb|ACDX02000017.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont16.1, whole genome shotgun sequence Length of sequence - 56984 bp Number of predicted genes - 50, with homology - 49 Number of transcription units - 32, operones - 16 average op.length - 2.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) 2 1 Op 2 . + CDS 637 - 2133 1920 ## COG0606 Predicted ATPase with chaperone activity 3 1 Op 3 . + CDS 2191 - 2667 186 ## gi|288576189|ref|ZP_05978357.2| conserved hypothetical protein + Prom 3358 - 3417 4.2 4 2 Op 1 3/0.167 + CDS 3492 - 4589 1375 ## COG3087 Cell division protein 5 2 Op 2 2/0.250 + CDS 4600 - 5244 827 ## COG0526 Thiol-disulfide isomerase and thioredoxins + Term 5256 - 5320 10.2 6 3 Tu 1 . + CDS 5603 - 6427 863 ## COG1968 Uncharacterized bacitracin resistance protein + Term 6462 - 6513 13.1 - Term 6450 - 6500 12.7 7 4 Op 1 3/0.167 - CDS 6549 - 7259 827 ## COG0313 Predicted methyltransferases 8 4 Op 2 . - CDS 7318 - 7908 510 ## COG0424 Nucleotide-binding protein implicated in inhibition of septum formation - Prom 7931 - 7990 3.8 + Prom 7884 - 7943 2.6 9 5 Op 1 20/0.000 + CDS 7963 - 8463 613 ## COG1399 Predicted metal-binding, possibly nucleic acid-binding protein 10 5 Op 2 2/0.250 + CDS 8498 - 8677 305 ## PROTEIN SUPPORTED gi|225077262|ref|ZP_03720461.1| hypothetical protein NEIFLAOT_02317 11 5 Op 3 2/0.250 + CDS 8714 - 9364 972 ## COG2236 Predicted phosphoribosyltransferases + Prom 9426 - 9485 3.4 12 6 Tu 1 . + CDS 9655 - 10713 1617 ## COG0416 Fatty acid/phospholipid biosynthesis enzyme + Term 10740 - 10778 9.5 - Term 11227 - 11287 15.2 13 7 Op 1 19/0.000 - CDS 11307 - 13370 2821 ## COG0751 Glycyl-tRNA synthetase, beta subunit - Term 13442 - 13480 7.1 14 7 Op 2 . - CDS 13487 - 14383 1584 ## COG0752 Glycyl-tRNA synthetase, alpha subunit - Prom 14408 - 14467 4.0 + Prom 14490 - 14549 3.4 15 8 Tu 1 . + CDS 14572 - 15366 910 ## COG3298 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB - TRNA 15720 - 15796 93.9 # Asp GTC 0 0 - TRNA 15829 - 15904 95.7 # Val TAC 0 0 - TRNA 15944 - 16020 93.9 # Asp GTC 0 0 - TRNA 16053 - 16128 95.7 # Val TAC 0 0 16 9 Tu 1 . - CDS 16201 - 18189 767 ## PROTEIN SUPPORTED gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 - Prom 18408 - 18467 4.9 + Prom 18364 - 18423 6.4 17 10 Tu 1 . + CDS 18444 - 18911 316 ## COG3012 Uncharacterized protein conserved in bacteria + Term 18933 - 18973 3.2 - Term 18993 - 19035 5.1 18 11 Tu 1 . - CDS 19132 - 19335 66 ## - Prom 19405 - 19464 1.6 - Term 19415 - 19443 3.0 19 12 Op 1 59/0.000 - CDS 19466 - 19858 645 ## PROTEIN SUPPORTED gi|225076946|ref|ZP_03720145.1| hypothetical protein NEIFLAOT_01998 20 12 Op 2 2/0.250 - CDS 19868 - 20299 746 ## PROTEIN SUPPORTED gi|225374042|ref|ZP_03751263.1| hypothetical protein NEISUBOT_02339 - Prom 20326 - 20385 7.0 - Term 20514 - 20547 4.1 21 13 Op 1 . - CDS 20744 - 21046 442 ## COG3027 Uncharacterized protein conserved in bacteria 22 13 Op 2 . - CDS 21056 - 21379 435 ## NLA_2640 hypothetical protein - Prom 21414 - 21473 2.4 23 14 Tu 1 . - CDS 21521 - 22510 1248 ## COG0240 Glycerol-3-phosphate dehydrogenase - Prom 22534 - 22593 3.1 24 15 Tu 1 . + CDS 22840 - 24024 1595 ## COG1858 Cytochrome c peroxidase + Term 24074 - 24131 11.2 + Prom 24149 - 24208 5.0 25 16 Tu 1 . + CDS 24431 - 26332 2908 ## COG0422 Thiamine biosynthesis protein ThiC + Term 26333 - 26384 13.1 - Term 26752 - 26801 11.7 26 17 Op 1 32/0.000 - CDS 26821 - 27093 462 ## PROTEIN SUPPORTED gi|15676241|ref|NP_273373.1| 50S ribosomal protein L27 27 17 Op 2 . - CDS 27119 - 27439 519 ## PROTEIN SUPPORTED gi|194099559|ref|YP_002002689.1| 50S ribosomal protein L21 - Prom 27608 - 27667 3.4 + Prom 27567 - 27626 4.5 28 18 Op 1 1/0.250 + CDS 27688 - 28662 1140 ## COG0142 Geranylgeranyl pyrophosphate synthase 29 18 Op 2 . + CDS 28668 - 29114 439 ## COG2707 Predicted membrane protein + TRNA 29119 - 29193 64.6 # Arg CCT 0 0 + Prom 29119 - 29178 77.3 30 19 Tu 1 . + CDS 29412 - 30596 1657 ## COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases + Term 30611 - 30661 13.0 - Term 31064 - 31103 7.8 31 20 Op 1 16/0.000 - CDS 31122 - 31277 265 ## PROTEIN SUPPORTED gi|225368008|ref|ZP_03747866.1| hypothetical protein NEIMUCOT_01871 32 20 Op 2 . - CDS 31306 - 31539 395 ## PROTEIN SUPPORTED gi|15676238|ref|NP_273370.1| 50S ribosomal protein L28 - Prom 31690 - 31749 6.4 - Term 31608 - 31636 -1.0 33 21 Op 1 19/0.000 - CDS 31816 - 33345 1260 ## COG0477 Permeases of the major facilitator superfamily - Prom 33465 - 33524 3.9 - Term 33477 - 33530 17.3 34 21 Op 2 . - CDS 33534 - 34724 1145 ## COG1566 Multidrug resistance efflux pump - Term 35332 - 35377 12.2 35 22 Tu 1 . - CDS 35410 - 36621 1996 ## COG0282 Acetate kinase 36 23 Op 1 5/0.167 - CDS 36949 - 38118 1570 ## COG2828 Uncharacterized protein conserved in bacteria 37 23 Op 2 3/0.167 - CDS 38150 - 40771 3471 ## COG1048 Aconitase A - Prom 40947 - 41006 4.5 38 24 Op 1 9/0.083 - CDS 41268 - 42422 2066 ## COG0372 Citrate synthase - Prom 42443 - 42502 4.3 39 24 Op 2 . - CDS 42505 - 43380 953 ## COG2513 PEP phosphonomutase and related enzymes - Prom 43523 - 43582 5.5 - Term 44361 - 44405 -0.8 40 25 Tu 1 . - CDS 44545 - 45978 1512 ## COG0477 Permeases of the major facilitator superfamily - Prom 46003 - 46062 5.2 - Term 46267 - 46303 1.5 41 26 Op 1 1/0.250 - CDS 46309 - 47079 936 ## COG1573 Uracil-DNA glycosylase 42 26 Op 2 . - CDS 47099 - 48361 1500 ## COG4277 Predicted DNA-binding protein with the Helix-hairpin-helix motif - Prom 48389 - 48448 8.2 - Term 48728 - 48776 14.8 43 27 Tu 1 . - CDS 48792 - 49505 945 ## COG3201 Nicotinamide mononucleotide transporter - Prom 49578 - 49637 7.4 + Prom 49804 - 49863 8.1 44 28 Tu 1 . + CDS 49902 - 50468 990 ## COG0431 Predicted flavoprotein + Term 50506 - 50556 15.3 - Term 50494 - 50544 15.3 45 29 Op 1 . - CDS 50561 - 51949 1888 ## COG1757 Na+/H+ antiporter - Prom 52062 - 52121 8.0 - Term 52143 - 52182 -0.5 46 29 Op 2 . - CDS 52196 - 52852 478 ## Daci_3320 hypothetical protein - Prom 52954 - 53013 2.7 - Term 52998 - 53035 8.0 47 30 Tu 1 . - CDS 53044 - 53934 1304 ## NLA_2480 periplasmic protein - Prom 53989 - 54048 1.9 48 31 Op 1 3/0.167 - CDS 54114 - 55913 2139 ## COG0340 Biotin-(acetyl-CoA carboxylase) ligase 49 31 Op 2 . - CDS 55910 - 56413 600 ## COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase - Prom 56443 - 56502 4.8 + Prom 56402 - 56461 3.4 50 32 Tu 1 . + CDS 56586 - 56982 322 ## NLA_8450 transposase Predicted protein(s) >gi|257257225|gb|ACDX02000017.1| GENE 1 303 - 623 597 106 aa, chain + ## HITS:1 COG:NMA2081 KEGG:ns NR:ns ## COG: NMA2081 COG2960 # Protein_GI_number: 15794957 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 106 12 117 117 118 85.0 3e-27 MFGKQLFEEVSAKISETIANSPAKDMEKNVKAMLGSAFNRMDLVTREEFDIQQQVLIKTR TKLVELEERLAKLEAAQEPEQAALEAAQVAAQEAVEEIKQQTEAGE >gi|257257225|gb|ACDX02000017.1| GENE 2 637 - 2133 1920 498 aa, chain + ## HITS:1 COG:NMB0405 KEGG:ns NR:ns ## COG: NMB0405 COG0606 # Protein_GI_number: 15676318 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATPase with chaperone activity # Organism: Neisseria meningitidis MC58 # 1 498 1 498 498 877 94.0 0 MSLALVYSRALSGMNAPLVEVEAHLANGLPHFNIVGLPDTEVKESRDRVRAAIIQSGFDF PAKKITVNLAPADLPKESGRFDLPIALGILAASGQIAPEKLAQYEFAGELALSGMLRPVR GALAMAWQGMQAGRSFVLPQENAEQAAVMRGITVYGARSLGEVAAHLNGIEPLAQTDCQV PQRSSENAKLPDLIDVKGQHTARLALEIAAAGGHSLLMMGPPGTGKSMLSQRLPGILPPL TEDELVEVWALRSLLPNHQQQLDSHRPFRSPHHSASSAAMVGGGSDPRPGEISLAHHGVL FLDELPEFDRKVLEVLREPLENGEIHISRAARQAVYPAKFQLVAAMNPCPCGYLGHPVKP CRCTPESVARYRSKISGPLLDRIDLTIEVPSLSATELMQQEAGESSARVLERVIAARDKQ YARQGKVNAALSVSELDTSARIQKEAQEALGNLLEKLSLSARSFHRIMRVARTLADLAGD EEVGRSHVLKAVSFRRAL >gi|257257225|gb|ACDX02000017.1| GENE 3 2191 - 2667 186 158 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|288576189|ref|ZP_05978357.2| ## NR: gi|288576189|ref|ZP_05978357.2| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 158 1 158 158 283 100.0 2e-75 MQMVSLQKLLMFIGKTMGLFMRCQKTSVFYDLTQDFLWGMERRYDAISLKKSIFLISNYF SFETDWDKGIENWVAFHGEKKTDFILLNCMIPFVFAHNSLFEKFKKFSEIKILFFNNYHE DKVFLEKWVMDNLFQIPEGYYDFTKAHTISDFIYVTYT >gi|257257225|gb|ACDX02000017.1| GENE 4 3492 - 4589 1375 365 aa, chain + ## HITS:1 COG:NMA2079 KEGG:ns NR:ns ## COG: NMA2079 COG3087 # Protein_GI_number: 15794955 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division protein # Organism: Neisseria meningitidis Z2491 # 1 365 3 287 289 97 38.0 6e-20 MNKNTQYGKGLFGFFFGLLLATGVIGGILYFLNQDTPNAFKGATEPQKQQTEPEILKPQE KSKPEAKPEVEEPPVVVPVEKESPTEESKPEAKRSETDDDAAAKEKERAEKEAQEKADKA KADKERADKEKAEKERAVREAEDEARETEKALREAEREDKDAAERELKQKLAEKKAELAK KRAEKAKADKEAADKAKKAAELTDKQKARAERKLAEKKAAEKKAAEAKKTETAKKTNKPT PEQILNSGSIEKARQEANKGAAKEVKKAEADKQTAKADNAKAEAKTAEGGKKVILQMGSY ADRNSADAQRAKLAMLGISSKVVERTNGDKTVYRVQSNSMSSEAAKNVQKDLQKHNINSL MRSAQ >gi|257257225|gb|ACDX02000017.1| GENE 5 4600 - 5244 827 214 aa, chain + ## HITS:1 COG:NMB0407 KEGG:ns NR:ns ## COG: NMB0407 COG0526 # Protein_GI_number: 15676320 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Neisseria meningitidis MC58 # 18 211 15 208 214 259 65.0 3e-69 MKRTTKPAAILLSLALAFSASAQAAVEGVDYTVLKKPIPQQDASKIEVLEFFGYFCVHCQ NFDPVLLSYSKTFPKDVYLRTEHVVWMPEMLGLARVAAAVNASGLKYQANPAIFKAVHEQ KINLADTATFKSWAAAQKSFDSKKLIAAYDAPASLAAAKKMQSLTETYRIEGTPDVIVGG KYRVIFNSDWANGQKTIGELINKVRQERSSKAVR >gi|257257225|gb|ACDX02000017.1| GENE 6 5603 - 6427 863 274 aa, chain + ## HITS:1 COG:NMB0408 KEGG:ns NR:ns ## COG: NMB0408 COG1968 # Protein_GI_number: 15676321 # Func_class: V Defense mechanisms # Function: Uncharacterized bacitracin resistance protein # Organism: Neisseria meningitidis MC58 # 1 272 1 272 273 394 75.0 1e-110 MDILTLLKALIMGIVEGLTEFLPISSTGHLIVLGDLLNFHSNGKVFEIAIQLGAVLAVIF EYRQRFTSVLSGLGKDRAANRFVLNLAIAFVPAALMGFLFRKQIKLYLFNPKTVAIMLVL GGLFILWVERRQSKVKPKVKSVDEMHPIDALVVGCAQVCALVPGTSRSGSTIMGGMLWGI ERKAATEFSFFLAVPMMIAATGYDVFKHYELFTLQDIGLIAVGFIAAFLAGLLAIKSLLK FVSSKNYVPFAYYRIVFGGLILLTWAMGWVKWAA >gi|257257225|gb|ACDX02000017.1| GENE 7 6549 - 7259 827 236 aa, chain - ## HITS:1 COG:NMB1908 KEGG:ns NR:ns ## COG: NMB1908 COG0313 # Protein_GI_number: 15677739 # Func_class: R General function prediction only # Function: Predicted methyltransferases # Organism: Neisseria meningitidis MC58 # 1 236 6 241 241 401 87.0 1e-112 MSPILYLIPTPLGAPDTPCLLPHEQAQITGLTDFVVEAEKTARAHLKHLGVTTPIRELNL QTLNEHTDLKTLPELLKPLQEGRSMGILSEAGCPAVADPGANLVALAHRHGYEVRPLVGP SSLLLALMASGANGQNFAFKGYLPSEKSERIAALKSLEQRSRQQNETQLFIETPYRNDAL LADALETLHPETGLCTATDLTLPSQEIISQTVAAWRKSKMLPNLKKRPTIFVLHAG >gi|257257225|gb|ACDX02000017.1| GENE 8 7318 - 7908 510 196 aa, chain - ## HITS:1 COG:NMA0546 KEGG:ns NR:ns ## COG: NMA0546 COG0424 # Protein_GI_number: 15793540 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Nucleotide-binding protein implicated in inhibition of septum formation # Organism: Neisseria meningitidis Z2491 # 1 196 1 196 196 286 70.0 2e-77 MSAKLPLILGSGSVFRRAQLERLGIDFQTVAPNFDETPAAGENAADTALRLAEGKARSLA ARFPAALVIGADQVAWCNDRQLGKPMNVANAQQMLRDLSGRKIEFYSAIVLLNTASGRIQ RHVDNTSVVMRMLTDGQIERYLAREPDAVYCAGAAKSEGLGAAMLERIDSSDPNALIGLP IFKLVEFLKNEGVEII >gi|257257225|gb|ACDX02000017.1| GENE 9 7963 - 8463 613 166 aa, chain + ## HITS:1 COG:NMA0545 KEGG:ns NR:ns ## COG: NMA0545 COG1399 # Protein_GI_number: 15793539 # Func_class: R General function prediction only # Function: Predicted metal-binding, possibly nucleic acid-binding protein # Organism: Neisseria meningitidis Z2491 # 1 166 1 167 167 261 83.0 3e-70 MSDPNLIDPEVFASEKRSLQGSFLLEELDERVRSHDYPADKQTKVSFTLSGGRDRLQRLF LDLNVKADMPLICQRCIRPMPFTLDETSRIVLFANEEDLDEAMLTDEELEGMPIEKELDV RGLVEDQILMSLPFSPRHENCDNAALEQVNQDKPNPFAVLAGLKSS >gi|257257225|gb|ACDX02000017.1| GENE 10 8498 - 8677 305 59 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225077262|ref|ZP_03720461.1| hypothetical protein NEIFLAOT_02317 [Neisseria flavescens NRL30031/H210] # 1 59 1 59 59 122 98 6e-27 MAVQQNKKSPSKRGMHRSHDALTAPSLSVDSVTGEVHRPHHISPNGMYRGRKVVKAKGE >gi|257257225|gb|ACDX02000017.1| GENE 11 8714 - 9364 972 216 aa, chain + ## HITS:1 COG:NMA0543 KEGG:ns NR:ns ## COG: NMA0543 COG2236 # Protein_GI_number: 15793537 # Func_class: R General function prediction only # Function: Predicted phosphoribosyltransferases # Organism: Neisseria meningitidis Z2491 # 42 215 1 174 175 334 91.0 6e-92 MQCWLFYITSELPDFMPEPISTHGTKSLQFKLIHPIQSGIAMKQKIWYTYDDIHRVIKAL AEKIQNSGVKYDAMIAIGGGGFIPARMLRCFLEIPIYAITTAYYDSDNEGQVTEEVKKVQ WLDPVPDALKGKNVLVVDEVDDSRVTMEFCLTELRKEDFGTIAVAVLHEKIKAKVGKIPE GIPYFSGLTVEDWWINYPWDALDIDEHNRLAAEGKK >gi|257257225|gb|ACDX02000017.1| GENE 12 9655 - 10713 1617 352 aa, chain + ## HITS:1 COG:NMA0542 KEGG:ns NR:ns ## COG: NMA0542 COG0416 # Protein_GI_number: 15793536 # Func_class: I Lipid transport and metabolism # Function: Fatty acid/phospholipid biosynthesis enzyme # Organism: Neisseria meningitidis Z2491 # 1 341 1 341 351 531 84.0 1e-151 MITLAVDAMGGDSGLAVTVPGALAFLKQQQDVHLIMVGDKSTVRQALSAANAPMDRITVL HASEVVGMDEAPQLALKNKKDSSMRIAINQVKEGNAQAAVSAGNTGALMATARFVLKTIP GIDRPAIAKFLPSDSEHLTLALDLGANVDCTPEQLVQFAIIGNELFQALYPQKGSPRVGL LNVGTEDIKGTDTVKQTFKLLKSSKLNFIGNIESNGVLYGEADVIVADGFVGNIMLKTIE GAVKFMSGAIRQEFQRNLFNKMAAVAALPALKGLKGKLDPRKFNGAILLGLRGIVIKSHG GTDDIGFGYALEEAYHEAKSASLSKIEQGVAEQLAALETIKEQKEAASDTAE >gi|257257225|gb|ACDX02000017.1| GENE 13 11307 - 13370 2821 687 aa, chain - ## HITS:1 COG:NMB1930 KEGG:ns NR:ns ## COG: NMB1930 COG0751 # Protein_GI_number: 15677760 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase, beta subunit # Organism: Neisseria meningitidis MC58 # 1 687 1 687 687 1136 95.0 0 MTTQTLLIELLTEELPPKALNNLGNHFAASVAEGLEKAQLIDGEAEFTAYASPRRLAVQI KNVKAVQADQKIVKKGPAVANAMKDGVPTKALEGFARGAGAKIEDLTIVHDGKQDVYAYE YVQTGKPLGELLEDIINQAVKKLPIPKVMRWGSSTFTFVRPVHGLIVLHGDDIVDVSVLG LQSGNQTLGHRFLSNGEITIENADSYAAQMREQGKVVASFAERKAAIQTALSEQAGRLKA TVAADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMN RFLLVSNLQTEDPSHIIQGNERVLRARLSDAEFFYKQDQKATLESRLPKLANVVYHNKIG SQAERIERLQSIAAHIAKALGADAAAAERTARLAKADLVTEMVGEFPELQGTMGKYYARL DGETEEIAEAVEQHYQPRFAGDNLPNGKVATAVALADKLETLVGIWGIGLIPTGDKDPYA LRRAALGILRMLMQYGLDVNELIQTTFDSFPKGLLNEKTLSETADFMQARLAVLLQNDYP QDIVAAVLAKQPRRLDDLTAKLQAVAAFKQLPEAAALAAANKRVQNLLKKADAALGEVNE SLLQQDEEKALYAAAQGLQPKIAAAVADGNFQTALSELASVKPQVDAFFDGVMVMAEDPA VKQNRLNLLNRLAEQMNAVADIALLGE >gi|257257225|gb|ACDX02000017.1| GENE 14 13487 - 14383 1584 298 aa, chain - ## HITS:1 COG:NMA0521 KEGG:ns NR:ns ## COG: NMA0521 COG0752 # Protein_GI_number: 15793519 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase, alpha subunit # Organism: Neisseria meningitidis Z2491 # 1 297 1 297 301 614 98.0 1e-176 MLTFQQIIFKLQTFWADKGCTVIQPFDMEVGAGTSHPATCLRALGPEPWFAAYVQPSRRP KDGRYGDNPNRLQHYYQFQVALKPAPANIQDLYLDSLRELGIDPKVHDIRFVEDDWENPT LGAWGLGWEVWLNGMEVTQFTYFQQVGGIDCTPVLGEITYGIERLAMYLQGVENVYDLVW AKTLDGNTVTYGDVYHQNEVEQSTYNFEYSDADWLLRQFNDYEAQAKRLLAEENASLALP AYELVLKAGHTFNLLDARGAISVTERATYIGRIRALSRTVAQKYVESREKLGFPLIKK >gi|257257225|gb|ACDX02000017.1| GENE 15 14572 - 15366 910 264 aa, chain + ## HITS:1 COG:NMB1417 KEGG:ns NR:ns ## COG: NMB1417 COG3298 # Protein_GI_number: 15677276 # Func_class: L Replication, recombination and repair # Function: Predicted 3'-5' exonuclease related to the exonuclease domain of PolB # Organism: Neisseria meningitidis MC58 # 1 263 1 263 264 489 85.0 1e-138 MTPILAFDIETVPDVNGIRLLYDLPASLPDDEVVLFAQQKRRAQNGSDFMQHHLHQVVAI SCCMRWGQDKIHVGTIGEMHDSEEEMIAKFFDLIESHTPQLVSWNGGGFDLPVLHYRALI HGIAAARYWDMGEGDFGDSRDFKWNNYISRYHNRHCDLMDLLALYQPRANVPLDDMAKLC GFPGKLGMDGSKVWEAFHAGRLKDIRDYCETDAANTYLMFLRFRLMSGALDADEYEVEVK RLKHYLTGQAQDKQHWNEFVAAWR >gi|257257225|gb|ACDX02000017.1| GENE 16 16201 - 18189 767 662 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 [Haemophilus influenzae 7P49H1] # 11 559 12 558 618 300 32 2e-80 MHETFSLAPIVIVLLVSVITVIYCRKFNIPSMLGYLLVGFIAGPGMLKLIPQGHATDYLG EIGIVFLMFSIGLEFSLPKLKAMRRLVFGLGGLQVIVTMLSIIGILMLMGVNFNWAFAAA GAMTMSSTAIVSRILSEKTELGQPHGQMAMGVLLMQDIAVVPLMILIPALSGNGEEGSLW VALGLAGLKMLVTLGVLFVVGSKVMSRWFRMVAKRKSSELFMINVLLVTLGVAYLTELEG LSMALGAFVAGMLLSETEYRFQVEDDIRPFRDILLGFFFITVGMKLDIQALIGGWQQILI LLAILLVLKALVVFFIALHMKHPIADSLKTALYLAQGGEFGFVMLNISSKINMVSPELEQ AATAAILLSMIIAPFILGSSDAIVSRFVKSSWDMKALDLHSILVETMSKSDHVLIIGFGR GGQTVGRVLAQENIPFFALDLDIARVQVARNAGEPVSFGDAKRREVLEAAGLERAKMVVI TLNNMHETQHVLDNIMSLHPSMPVYVRATNDDYVKTFTDMGAEEAVSDTKETSLVLASYA MLGNGATFNHVYQTIANIRHSRYASLEGLFVGSDDENGFDEEGKSICRHAFPLTGEAHAI GKTIRDLPLDHAGIKLLFIRRNTSRIENPDLDLQLQPNDILVVAGRQERIISFENWSLQG NI >gi|257257225|gb|ACDX02000017.1| GENE 17 18444 - 18911 316 155 aa, chain + ## HITS:1 COG:HI0277 KEGG:ns NR:ns ## COG: HI0277 COG3012 # Protein_GI_number: 16272235 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Haemophilus influenzae # 6 154 13 161 161 174 57.0 6e-44 MPPTPCPCSSSLPYAECCHPFHTHQTHPQTGEKLMRSRYSAYVLHNIDYIVATTVPSQQN LLNQEEMQQWSRETLWLGLEVIHHTLIGKRHAQVEFNAHFQDGAETACHHELSTFVNIDG YWYFIDPNVPLPTMKQACICGSGKKFKACCGQFFK >gi|257257225|gb|ACDX02000017.1| GENE 18 19132 - 19335 66 67 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLVFKMQVCNRNVWDAAVNFNFMKLHLMKCCKLTNMNNRKCTVYPNKLTLILYSEQFIQK ISLLNSI >gi|257257225|gb|ACDX02000017.1| GENE 19 19466 - 19858 645 130 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225076946|ref|ZP_03720145.1| hypothetical protein NEIFLAOT_01998 [Neisseria flavescens NRL30031/H210] # 1 130 1 130 130 253 98 2e-66 MNGKYYYGTGRRKSSVARVFLTKGTGQIIVNGRPVDEFFARETSRMVVRQPLVLTENAEA FDIKVNVIGGGETGQSGAIRHGITRALIDFDAALKPALSQAGFVTRDAREVERKKPGLRK ARRAKQFSKR >gi|257257225|gb|ACDX02000017.1| GENE 20 19868 - 20299 746 143 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225374042|ref|ZP_03751263.1| hypothetical protein NEISUBOT_02339 [Neisseria subflava NJ9703] # 1 143 1 143 143 291 98 4e-78 MKTFSAKPHEVKREWFVIDAQDKVLGRVAAEVAHRLRGKHKPEYTPHVDTGDYIIVINAD KLRVTGAKFEDKKYFRHSGFPGGIYERTFREMQEQFPGRALEQAVKGMLPKGPLGYAMIK KLKVYAGAEHAHAAQQPKVLELK >gi|257257225|gb|ACDX02000017.1| GENE 21 20744 - 21046 442 100 aa, chain - ## HITS:1 COG:NMA0377 KEGG:ns NR:ns ## COG: NMA0377 COG3027 # Protein_GI_number: 15793385 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 99 1 100 101 117 66.0 7e-27 MSIEQVSLDIMNVNFTINTPSEEKDTLLQAVDMLNKKSAAIKESGRIVGSDKIAIMTALN VVHDLLKITLKDDLAIGEFERKITDMNNACQKALARLEQN >gi|257257225|gb|ACDX02000017.1| GENE 22 21056 - 21379 435 107 aa, chain - ## HITS:1 COG:no KEGG:NLA_2640 NR:ns ## KEGG: NLA_2640 # Name: not_defined # Def: hypothetical protein # Organism: N.lactamica # Pathway: not_defined # 1 107 15 121 123 89 65.0 5e-17 MNQSLDTLEVSVYQLAQKFETLVGENRRLNEEIDRLKLEHEQQKREHEAAVDELSEALLV QVGKLKEDLQGKIDNLNAEKEQYRSALEQAAEKIRQLISRLPQETQS >gi|257257225|gb|ACDX02000017.1| GENE 23 21521 - 22510 1248 329 aa, chain - ## HITS:1 COG:NMB2060 KEGG:ns NR:ns ## COG: NMB2060 COG0240 # Protein_GI_number: 15677882 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Neisseria meningitidis MC58 # 1 329 1 329 329 569 91.0 1e-162 MKITVIGAGSWGTALALHFARHGNEVALWTRNPEQVRTLQAERENKHGLPGFPFPESLTV YADLGDALKDSELVLVVTSVAGLRSSAELLKQHNADRVPVLAACKGFEQDTGLLTFQVLK EVLPENKKIGVLSGPSFAQELAKQLPCAVVIASENQEWIEELVPQLNTNVMRLYGSTDVI GVAVGGAVKNVMAIATGLSDGLEYGLNARAALVTRGLAEITRLAMAMGAQPKTMMGLAGI GDLILTCTGALSRNRRVGLGLAEGKELHQVLVEIGHVSEGVSTIEEVFNTAVKYQIDMPI TQTLLQLIRKEMTPQQVAERLMERSARFE >gi|257257225|gb|ACDX02000017.1| GENE 24 22840 - 24024 1595 394 aa, chain + ## HITS:1 COG:aq_136 KEGG:ns NR:ns ## COG: aq_136 COG1858 # Protein_GI_number: 15605716 # Func_class: P Inorganic ion transport and metabolism # Function: Cytochrome c peroxidase # Organism: Aquifex aeolicus # 66 391 22 353 355 360 54.0 2e-99 MNYRNTRLLLSLAVLSALAACGGQESKEQKPASAPTEASAVQTTPNAASAASAASQAAVD NNASPEDQELLKRAQGIFKPLPSAEEMQKLRPFTEEQVKLGHQLWYEPRLSKGNTVSCNS CHNLATAGVDNLPTSQGHKGQFGGRNSPTALNAALLGMQFWDGRAADVEEQAGGPLVNPV EMANDSQEAAAAKIAKIPEYQELFKTAFPEDGAVSFKNITAALGAFERTLLTPTKWDDYL KGNVNALTEQERKGVRAFMDNGCIACHSGVNLGGATFQKFGLVEGPYWKFIEDPKHDKGR ADVTKKAEDEFFFRVPGLRNVAKTYPYFHNGSVWELDKAVTIMGKAQLGKDLSKEDTDNI VAFLKTLSGSVSESARTVPELPLSAPMESHPNNK >gi|257257225|gb|ACDX02000017.1| GENE 25 24431 - 26332 2908 633 aa, chain + ## HITS:1 COG:NMB2040 KEGG:ns NR:ns ## COG: NMB2040 COG0422 # Protein_GI_number: 15677863 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine biosynthesis protein ThiC # Organism: Neisseria meningitidis MC58 # 1 633 1 633 633 1295 97.0 0 MTTPKKTAKTSGNEARELADLSEDIGIRFKYPNSERVYLQGSRDDIRVPLREIRQDDTYT AQGTEANPPIPVYDTSGVYGDPAAHIDLKQGLPHVRTAWLDERGDTEILPKLSSEYGIER AHDPQTAHLRFNQITRPRRAKAGSNVTQLHYARQGIITPEMEFVAIRERMKLDELFRRPE YAKLLKQHAGQSFGANIPTHPDQITPEFVRQEIAAGRAIIPANINHPELEPMIIGRNFRV KINGNLGNSAVTSSLTEEVEKMVWSLRWGADTIMDLSTGAHIHETREWIIRNAPVPIGTV PIYQALEKTGGIAEDLTWDLFRDTLIEQAEQGVDYFTIHAGVLLRYVPMTANRLTGIVSR GGSIMAKWCLAHHKENFLYTHFDEICEIMKAYDVSFSLGDGLRPGCIADANDESQFAELH TLGELTAKAWKHDVQVMIEGPGHVPLQRVKENMTEELQHCFEAPFYTLGPLVTDIAPGYD HITSGIGATNIGWYGTAMLCYVTPKEHLGLPDKEDVRTGIITYKLAAHAADLAKGWPGAQ LRDNALSKARFEFRWRDQFRLSLDPERAESFHDETLPAEGAKIAHFCSMCGPKFCSMKIT QEVRDYADKQKAQQRGMEEKAVEFVKKGAEIYS >gi|257257225|gb|ACDX02000017.1| GENE 26 26821 - 27093 462 90 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15676241|ref|NP_273373.1| 50S ribosomal protein L27 [Neisseria meningitidis MC58] # 1 90 1 90 90 182 100 4e-45 MASKKAGGSTRNGRDSEAKRLGVKAYGNELIPAGSIIVRQRGTKFHAGDNVGMGKDHTLF AKVDGYVEFKTKGALNRKTVSIRPYTGSEE >gi|257257225|gb|ACDX02000017.1| GENE 27 27119 - 27439 519 106 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|194099559|ref|YP_002002689.1| 50S ribosomal protein L21 [Neisseria gonorrhoeae NCCP11945] # 1 106 1 106 106 204 98 9e-52 MELSMYAVVKTGGKQYKVAVGEKLKVEQIPAELDSQIELTEVLMIADGESVKVGAPFIEG AKVTAKVVAHGRGEKVRIFKMRRRKHYQKRQGHRQNFTQIEIVAIA >gi|257257225|gb|ACDX02000017.1| GENE 28 27688 - 28662 1140 324 aa, chain + ## HITS:1 COG:NMA2161 KEGG:ns NR:ns ## COG: NMA2161 COG0142 # Protein_GI_number: 15795032 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Neisseria meningitidis Z2491 # 1 324 1 324 324 546 89.0 1e-155 MLENLPYFQRHLPEDLSRVNEVINKAVQSDVALISQIGTYIISAGGKRLRPIMTILAGKS VGYDGDKLYALAAMVEFIHTSTLLHDDVVDESDLRRGRETANNLFGNAAAVLVGDFLYTR AFQLMVDSGSMRILEVMADATNIIAEGEVMQLMNIGNTDITEAQYVQVIQYKTAKLFEAA AQVGAILGNAPPEHEQALKDYGMYVGTAFQIIDDVLDYSGETEEIGKNVGDDLAEGKPTL PLIYLMRNGSKQVADDVRHALENADRSSFQKIHDYVVRSDALTYSISEARKAVEQAVASL AVLPDSEVKQAMIQLAEESLARVS >gi|257257225|gb|ACDX02000017.1| GENE 29 28668 - 29114 439 148 aa, chain + ## HITS:1 COG:NMA2160 KEGG:ns NR:ns ## COG: NMA2160 COG2707 # Protein_GI_number: 15795031 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis Z2491 # 1 147 1 147 148 179 82.0 1e-45 MNFSFVPMFLVTLIFLGVVSNNNSITISAAILLLMQQTALSQYIPFMEKHGLHFGIILLT IGVLSPLVSGKVQIPSLSEFVNFKMIAAVLIGILVAWLAGRGVPLMSEQPVLVTGLLIGT VIGVAFMGGIPVGPLIAAGLLSFIAGKV >gi|257257225|gb|ACDX02000017.1| GENE 30 29412 - 30596 1657 394 aa, chain + ## HITS:1 COG:NMA2164 KEGG:ns NR:ns ## COG: NMA2164 COG0654 # Protein_GI_number: 15795035 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases # Organism: Neisseria meningitidis Z2491 # 1 394 1 394 394 726 90.0 0 MSLYSDILVVGAGPAGLSFAAELAGSGLKVTLIEKSPLEVLQNPPYDGREIALTHLSREI MQRLGMWDLIPKDEIYPLRDAKVLNGQSDYQLHFPQPTEARGEPADCLGYLISNHNIRKA AYEVVSKLDNVTILTGTGVKEVKTSEDEAQVILENGEVLSGRLLLAADSRFSQTRRQLGI SSDMHDYSRTMFVCRMKHTLSNQHTAYECFHYGRTIALLPLEEHLTNTVITVDSDKADTI KKMSPEELAASVKEQLKGRLGDMELVSTIHNYPLVGMIAQRFYGKRSALIGDAAVGMHPV TAHGFNLGLSSADILAKLILEAEQRGQDIGTASLLEKYSTKHMLHAQPIYLGTNMLLKLF TNETAPAKILRGLVLRASNNFPPLKKLITKQLTG >gi|257257225|gb|ACDX02000017.1| GENE 31 31122 - 31277 265 51 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225368008|ref|ZP_03747866.1| hypothetical protein NEIMUCOT_01871 [Neisseria mucosa ATCC 25996] # 1 51 1 51 51 106 100 3e-22 MRDKIKLESSAGTGHFYTTTKNKRTMPGKLEIKKFDPVARKHVIYKETKLK >gi|257257225|gb|ACDX02000017.1| GENE 32 31306 - 31539 395 77 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15676238|ref|NP_273370.1| 50S ribosomal protein L28 [Neisseria meningitidis MC58] # 1 77 1 77 77 156 100 2e-37 MARVCKVTGKRPMSGNNVSHANNKTKRRFLPNLQSRRFWVESENRWVRLRVSNAALRTID KVGIDVVLADLRARGEA >gi|257257225|gb|ACDX02000017.1| GENE 33 31816 - 33345 1260 509 aa, chain - ## HITS:1 COG:NMA2168 KEGG:ns NR:ns ## COG: NMA2168 COG0477 # Protein_GI_number: 15795039 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Neisseria meningitidis Z2491 # 1 509 9 516 516 791 81.0 0 MNYPPLTGIRLVLVTLSLSLAVFMEVLDTTIANVAVPVIAGDLGAATTQGTWVITSFAVA NAISVPLTGFLAKRMGEVRLFVGSVIGFVITSWLCGISPNLQTLVLFRILQGFVAGPLIP LSQSLLMASYPPEKRTLALALWAMTVVVAPVLGPIFGGWISDNWHWGWIFFINIPIGILS AVIAWQQLRDRETDTVKTPIDYTGLILMIVGIGSLQMMLDRGKELDWFASGEIIVLAVVA TVCLTYFIVWELGEKYPIVDLSLFKNRNFTIGVLTTSLGFMVYMGTLTLLPLVLQSNLGY TATWAGLAAAPIGFLPIFLSPLIGRFGNKIDMRLLVTGSFLMFAFTFHWRTDFYAGMDMS NVVWPQFWQGLGVAMFFLPLTTITLSHMKGPQIASASSLSNFLRVFMGGVGVSVVSTMWE RREALHHTQLTEHITPYSPDTAEAVRQMGEAGLNGGQAVGLINSTITQQGFIVGSNEIFL AGSILFIIMIPIIWLAKPPFHHDGGGGGH >gi|257257225|gb|ACDX02000017.1| GENE 34 33534 - 34724 1145 396 aa, chain - ## HITS:1 COG:NMA2169 KEGG:ns NR:ns ## COG: NMA2169 COG1566 # Protein_GI_number: 15795040 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Neisseria meningitidis Z2491 # 50 395 52 393 394 396 66.0 1e-110 METKSANGGQTPGTLGKPVKMPNRRKRNMAVVTLLFVLAAIGVAFAYVLFWQHEETTEDA YVAGYLVQITPQVGGTVRKVTFDDTDVVKKGDVLVTLDDSDFQLAYDRAQNELIQAIRQN KQQTAVNSQAKAQVLLRKADLARAQADLRRREALSGTDAISGEELSHARAAVVQAQAALK AVEAEEASAQAALGNNIPVREQPAVQTAVSKIKDAWLNLQRTQIRAPMGGQIAKRNVQVG QRISQGAALMAVVPLTDLWVDANFKESQLRKMKIGQPVEMTADLYGKKVVYHGKVMGLSA GTGSAFSLLPPQNATGNWIKVVQRVPVRISLDPNELKANPLRVGLSMTVKVDIAEAGSGK PMTAAAVKNSAAPETDSVDWAAANALIDKIFEKYAK >gi|257257225|gb|ACDX02000017.1| GENE 35 35410 - 36621 1996 403 aa, chain - ## HITS:1 COG:NMB0435 KEGG:ns NR:ns ## COG: NMB0435 COG0282 # Protein_GI_number: 15676347 # Func_class: C Energy production and conversion # Function: Acetate kinase # Organism: Neisseria meningitidis MC58 # 1 399 1 399 399 760 94.0 0 MSDQLILVLNCGSSSLKGAVIDRKSGSVVLSCLGERLTTPEAVITFSKDGNKRQVPLTGR NCHAGAVGMLLNELEKHGLHDRIKAIGHRIAHGGEKYHESVLIDQDVLDELKACIPLAPL HNPANISGILAAQEHFPGLPNVGVMDTSFHQTMPERAYTYAVPRELRKKYAFRRYGFHGT SMRYVAPEAARILGKPLEDLRMIVAHLGNGASITAIRNGKSVDTSMGFTPIEGLVMGTRC GDIDPGVYSYLTAHAGMNIEQVDEMLNKKSGLLGISELSNDCRTLEIAADEGHEGARLAL EVMTYRLAKYIASMSVACGGIDALVFTGGIGENSRNIRAKTVAYLDYLGLHIDTKANMEK RYGNSGIISPTGSNPAVLVVPTNEELMIALDTAALAGFLQEAG >gi|257257225|gb|ACDX02000017.1| GENE 36 36949 - 38118 1570 389 aa, chain - ## HITS:1 COG:NMA2051 KEGG:ns NR:ns ## COG: NMA2051 COG2828 # Protein_GI_number: 15794929 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 389 1 389 389 706 95.0 0 MPQIKIPAVYYRGGTSKGVFFKRSDLPEAAREAGSTRDKILLRVLGSPDPYGKQIDGLGN ASSSTSKAVILDKSERADHDVDYLFGQVSIDKPFVDWSGNCGNLTAAVGAFAIEQGLVDK GKIPSDGICTVKIWQKNIGKTIIAHVPMQNGEVLETGDFELDGVTFPAAEVQIEFLDPAD GEGSMFPTGNLVDELDVPSIGRLKATLINAGIPTVFLNAADLGYTGKELQDDINNDAAAL EKFEKIRAYGALKMGLINDVSEAAARAHTPKVAFVAPASDYTASGGKTVNAADIDLLVRA LSMGKLHHAMMGTASVAIAAAAAVPGTLVNLAAGGGTRNEVRFGHPSGTLRVGAAAECSD GIWAVKKAVMSRSARVIMEGRVRVPEDCF >gi|257257225|gb|ACDX02000017.1| GENE 37 38150 - 40771 3471 873 aa, chain - ## HITS:1 COG:NMB0433 KEGG:ns NR:ns ## COG: NMB0433 COG1048 # Protein_GI_number: 15676345 # Func_class: C Energy production and conversion # Function: Aconitase A # Organism: Neisseria meningitidis MC58 # 1 864 1 863 868 1687 96.0 0 MAANQRYRKPLPGTDLEYYDARAACEDIKTGSYDKLPYTSRILAENLVNRADKVDLPTLQ SWLGQLIDGKQEIDFPWYPARVVCHDILGQTALVDLAGLRDAIAEKGGDPSKVNPVVQTQ LIVDHSLAVECGGYDPDAFRKNREIEDRRNEDRFHFINWTKTAFENVDVIPAGNGIMHQI NLEKMSPVVQVKNGVAFPDTCVGTDSHTPHVDSLGVISVGVGGLEAETVMLGRASMMRLP DIVGVALTGKRQAGITATDIVLALTEFLRKERVVGAFVEFFGEGARSLSIGDRATISNMT PEFGATAAMFAIDAQTIDYLKLTGREDAQVKLVETYAKTAGLWADALETAVYPRVLKFDL SSVTRNMAGPSNPHARFATVDLAAKGLAKPYEEPSDGLMPDGAVIIAAITSCTNTSNPRN VVAAALLARNANRFGLKRKPWVKTSFAPGSKVAEIYLKEAGLLPEMEKLGFGIVAFACTT CNGMSGALDPKIQQEIIDRDLYATAVLSGNRNFDGRIHPYAKQAFLASPPLVVAYAVAGS IRFDIENDVLGVSDDGKEIRLKDIWPTDEEIDAVVAEYVKPQQFRDVYVPMFDTGKAQKA PSPLYDWRPMSTYIRRPPYWEGALAGERSLTGMRPLAILPDNITTDHISPSNAILAASAA GEYLAKMGLPEEDFNSYATHRGDHLTAQRATFANPKLFNEMVKNEDGSVRQGSLARVEPE GETMRMWEAIETYMNRKQPLIIIAGADYGQGSSRDWAAKGVRLAGVEAIAAEGFERIHRT NLIGMGVLPLQFKPGTNRHTLQLDGTETYDVVGERTPRCDLTLVIHRKNGETVEVPVTCR LDTAEEVLVYEAGGVLQRFAQDFFGREGGLEVV >gi|257257225|gb|ACDX02000017.1| GENE 38 41268 - 42422 2066 384 aa, chain - ## HITS:1 COG:NMA2054 KEGG:ns NR:ns ## COG: NMA2054 COG0372 # Protein_GI_number: 15794932 # Func_class: C Energy production and conversion # Function: Citrate synthase # Organism: Neisseria meningitidis Z2491 # 1 384 1 384 384 752 94.0 0 MTATKETPTFKPKKSVALSGVAAGNTALCTVGRTGNDLSYRGYDILDLAQKCEFEEVAHL LIHGHLPNKFELAAYKAKLKSMRGLPIRVIKVLEALPAHTHPMDVMRTGVSMLGCVHPER ESHPDSEARDIADKLIASLGSILLYWYQYSHNGKRIDVESKEDTIGGHFLHLLHGKRPTE SQVKAMHVSLILYAEHEFNASTFTARVIAGTGSDMYSCITGAIGALKGPKHGGANEVAYD IQKRYRNADEAEADIRERIARKEIVIGFGHPVYTISDPRNVVIKEVARGLSREAGDMRLF DIAERLESVMWEEKKMFPNLDWFSAVSYQKLGVPTAMFTPLFVISRSTGWAAHVLEQRKD GKIIRPSANYTGPEDLAFVEIEER >gi|257257225|gb|ACDX02000017.1| GENE 39 42505 - 43380 953 291 aa, chain - ## HITS:1 COG:NMB0430 KEGG:ns NR:ns ## COG: NMB0430 COG2513 # Protein_GI_number: 15676342 # Func_class: G Carbohydrate transport and metabolism # Function: PEP phosphonomutase and related enzymes # Organism: Neisseria meningitidis MC58 # 1 291 2 292 292 541 96.0 1e-154 MSQLSAGARFRQAVKESNPLAVVGCVNAYFARLATQSGFKAVYLSGGGVAACSCGIPDLG ITTMEDVLIDARRITDNVDTPLLVDIDVGWGGAFNIARTIRNFERAGVAAVHIEDQVAQK RCGHRPNKAIVSKDEMVDRIKAAVDARVDENFVIMARTDALAVEGLDAAIERAQACVEAG ADMIFPEAMTDLAMYRQFADAVKVPVLANITEFGATPLYTQQELADNGVSLVLYPLSSFR AASKAALNVYEAIMRDGTQAAVVDTMQTRAELYEHLNYHDFEQKLDKLFQK >gi|257257225|gb|ACDX02000017.1| GENE 40 44545 - 45978 1512 477 aa, chain - ## HITS:1 COG:BS_lmrB KEGG:ns NR:ns ## COG: BS_lmrB COG0477 # Protein_GI_number: 16077336 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Bacillus subtilis # 27 471 18 476 479 259 36.0 7e-69 MHASDIDLDDTIHDYHADHPDFPSKTIVATLFIGAFFGYLNDTLLNVALTPIMKDFGVDK TTVQWLTTGFLLVMGAFTPITAGVIQWFETRKMVLFTQATFLAGSLICAFAPTFGILVVG RMVQAVSAAFFVPLLFNGILSIYPPNKRGTAMGVITMMFTAAPAIGPTLSGIIIDHTHWR VLFGFTAPFMLAAMVLVGKYLTVNLSNISRPKIDILSAVLSIAGFGGLVYASSNFARLPL AEFILLFAASVALVGWFAYRQSRLATPLLNLRAFEYKQFRHCIVILAGAVFLFLGLELMM PMYTQQVQMLTGTATGLILMPASIAQAVAAPLFGKLLDKKGGRFVVLPATVMLTVSLSVL WLFLRIDTQVMMLTAMFTLMAVSVSACVTGETHGLNALPKKLNPHGAAILTTINPIAGAV GAAFFVGATNIGEKLSSAASPQQAMLDGIHLAMGSALVLGAVMVFFAMRLKRHQTAS >gi|257257225|gb|ACDX02000017.1| GENE 41 46309 - 47079 936 256 aa, chain - ## HITS:1 COG:CC2333 KEGG:ns NR:ns ## COG: CC2333 COG1573 # Protein_GI_number: 16126572 # Func_class: L Replication, recombination and repair # Function: Uracil-DNA glycosylase # Organism: Caulobacter vibrioides # 114 249 100 231 479 71 31.0 2e-12 MQITLHYDGSFDGLLSTVFHVYACKYAPENVHITHDVQDTDLFSRSETVASSPERAQRVF KRLEQQIGRSGMVKLLYGFLIDLPEMPDTFLRIVRMMLARPMRKDVLCDYGLYDVMQWAQ WVKTVGHEKHRMEAFVRFEELTDGLYLARIEPQYDVLPLITRHFLNRYPQQQWAIFDMQR HYGILSSTDGLHAINGLEADRIQTSYAPNERSYQALWQDYFNSSNIPSRRNPKLHRQQMP QRYWKYLTEKQPAVLK >gi|257257225|gb|ACDX02000017.1| GENE 42 47099 - 48361 1500 420 aa, chain - ## HITS:1 COG:FN0954 KEGG:ns NR:ns ## COG: FN0954 COG4277 # Protein_GI_number: 19704289 # Func_class: R General function prediction only # Function: Predicted DNA-binding protein with the Helix-hairpin-helix motif # Organism: Fusobacterium nucleatum # 4 381 3 380 415 440 56.0 1e-123 MDYQKISRKLEILADAAKYDVSCSSSGGSRGNDGQGLGNSSRSGICHSFTEDGRCISLLK ILLTNHCIYDCAYCASRRSNDIPRAAFTVDEVVDLTMSFYRRNYIEGLFLSSGIFKNADY TMERLVRIAKKLREEHRFNGYIHLKTIPKASAEILHEAGLYADRLSVNMEIPTVSGLKLL APEKNHSDMTQPMAFVRNEIVSFADSRKTIKSTPKFAPAGQSTQFIIGAAGETDRQIIRA AGGFYRHYGLKRVYYSGYVPVLEDKRLPPLSTQVPLRRENRLYQADWLMRFYGFSDHEIL DEQQPFLDLDFDPKLAWALRHREWFPVPLQHAPLEMILRVPGIGVKSARKIVQARRFRMI TMAQLSKMGVVLNRARYFITLPEPNRYADLIDSPQLRGLLLQNTRSKFSQSDAVQSDLFG >gi|257257225|gb|ACDX02000017.1| GENE 43 48792 - 49505 945 237 aa, chain - ## HITS:1 COG:PM1838 KEGG:ns NR:ns ## COG: PM1838 COG3201 # Protein_GI_number: 15603703 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinamide mononucleotide transporter # Organism: Pasteurella multocida # 1 234 1 229 234 189 47.0 3e-48 MSLAWWKRELFGGWTHFEAVWLLMFLGIQAVVFVFNPDSWLASVAAVTGILCVVFVGKGK ISNYLFGLISVSLYAYVSYTFKLYGEMMLNLLVYVPVQFVGFAMWRKHMALGETAETEEV KAKALTVRQWLLVVAASVVGTSVYIEWLHHLGSALPTLDGVTVVVSIVAQVLMILRYREQ WALWIVVNILTISLWAVAWFKNGETSLPLLLMYVMYLCNSVYGYINWTKLVKRHSGQ >gi|257257225|gb|ACDX02000017.1| GENE 44 49902 - 50468 990 188 aa, chain + ## HITS:1 COG:NMB1796 KEGG:ns NR:ns ## COG: NMB1796 COG0431 # Protein_GI_number: 15677635 # Func_class: R General function prediction only # Function: Predicted flavoprotein # Organism: Neisseria meningitidis MC58 # 1 188 3 190 190 327 84.0 1e-89 MAKKVSILVGSLRKGSFARKVAQNVIPMFPEGYEAQIVEIGGLPLYNFDYDDPAETDFPT PESYTAFRETIKASDGVLFVTSENNRTVPACLKNAVDIGSKPNADVAWKNTPAGIISHSV GKMGGYSSQKNLRLALSYFNMPLTGQPEVFLGNSPTLFDDNGKLIESARSFVQGYIDQLV ALIEKNPK >gi|257257225|gb|ACDX02000017.1| GENE 45 50561 - 51949 1888 462 aa, chain - ## HITS:1 COG:NMA0715 KEGG:ns NR:ns ## COG: NMA0715 COG1757 # Protein_GI_number: 15793692 # Func_class: C Energy production and conversion # Function: Na+/H+ antiporter # Organism: Neisseria meningitidis Z2491 # 1 459 1 459 459 747 93.0 0 MFIFKSLLDMPRGEALAVVVALIGAMGYTIISLGWLPHMSIIAAITILILYGLARGLKYN DMQTGMVGAVGQGMGAIYLFFFIGLMVSALMMSGAIPTLMYYGFGLISPTYFYFSAFALC SIIGVSIGSSLTTCATVGVAFMGMAAAFHADLAMTAGAIVSGAFFGDKMSPLSDTTGISA SIVCIDLFEHIKNMMYTTIPAWLISAALMLWLLPNVAAHDLNSVESFRSQLEATGLVHGY SLVPFALLVVLALLRVNAVVAMLFTIIAALGVTYFHSTPDLNQLGAWFYGGYKLEGEAFK DISKLISRGGLESMFFTQTIVILGMSLGGLLFTLGVIPSLLDAIRAFLTTAGRATFSVAA TSVGVNFLIGEQYLSILLSGETFKPVYDKLGLHSRNLSRTLEDAGTVINPLVPWSVCGVF ISHALGVPVWEYLPYAFFCYLSLILTLLFGWTGLTLSKKETA >gi|257257225|gb|ACDX02000017.1| GENE 46 52196 - 52852 478 218 aa, chain - ## HITS:1 COG:no KEGG:Daci_3320 NR:ns ## KEGG: Daci_3320 # Name: not_defined # Def: hypothetical protein # Organism: D.acidovorans # Pathway: not_defined # 40 186 51 196 232 88 36.0 2e-16 MKPLIFLLPAVLSLHAAAQNYVIADDRLSSGVLTLEGSSFSVSTVNPNGNVCDYEGIVRN RIASDGEGCVVHFSFKRDSVRLDVPESAREACQSYCGHNAFFDGVYYKMPTACASKYAEA AERRFQAAYRDKRFREAANLKRQYLNQCGRFLYLTDWMRGLNDLAVSFKNAGDKAACRKT LAPLSEWLRDYRPNYINETDYKREASAARFNLKQCEAE >gi|257257225|gb|ACDX02000017.1| GENE 47 53044 - 53934 1304 296 aa, chain - ## HITS:1 COG:no KEGG:NLA_2480 NR:ns ## KEGG: NLA_2480 # Name: not_defined # Def: periplasmic protein # Organism: N.lactamica # Pathway: not_defined # 1 296 1 274 274 182 43.0 2e-44 MKWLFAALVALNIIVFGGMITHRLNNAKSPATAPVEGGAHELAQPESLRPQQAPAPADNA QPDWLQTDETQADLPEPESEEAIAERKKKEEEELARREKEKKEREEKARREKEKAAAAGN TTPTAAASENPATKNTPAAHQCTSNASVTLDEDDYHRIKGLLTRWPHAASRTVEKRGATK DQAAKTFRVLLPADSEAMNRLEALGNKGFNGTLYNGEISLGVMKSRSSAQVLISRLSAAG FGGARIVEQDDKGNASNSTLSVSRMTIIFMSVDEKDAQEIRNIVGRYGNLNMKTCK >gi|257257225|gb|ACDX02000017.1| GENE 48 54114 - 55913 2139 599 aa, chain - ## HITS:1 COG:NMA0357_1 KEGG:ns NR:ns ## COG: NMA0357_1 COG0340 # Protein_GI_number: 15793366 # Func_class: H Coenzyme transport and metabolism # Function: Biotin-(acetyl-CoA carboxylase) ligase # Organism: Neisseria meningitidis Z2491 # 1 340 1 334 338 501 73.0 1e-141 MTALKLPHSRVLAELADGLPQHVSHLARIAGVKPHQLNGFWQQMPAHIRGLLRQHDGQWR LVRPLALFNEETLQRLGAERGFQTTLKQECTSSNDEILNLARTSPEKAHKSLCVAHLQTK GRGRQGRKWTHRLGECLMFSFGWVFDKPQHELGSLAPAVALACRRALAASGLEIQIKWPN DLVAGRDKLGGILIETVRNEGKTAAVIGIGINFVLPKEVENAASVQALFHNMQLARGAAS VHCIAASTLLDKLLGELDAVLTQYAQNGFAPFLEEYQTAHRDHGKPVLLLRDGQTVSEGT VLSVDVQGALHLMTSAGEQTVVSGEISLRPDDTPKAAAPRAPERLLLLDGGNSQLKWAWV ENGVFNEVTRAPYRDLSKLGEEWAERSDDRTRIVGCAVCGDLKKALVEAHLTAPVRWLPS MPQALGIRNHYRNPAEHGSDRWFNALGSRRFSQNACVVVSCGTAVTTDALTEDNHYLGGT IMPGFHLMKEALAAKTANLDRPAGKVYPFPTTTPNAITSGMMDAVCGAVIMMHGRLQQKT GEGKPVDVIITGGGASKVVNALPKQFVLDNTVKIVDNLVIYGLLNWVAQEQEQTDTLPE >gi|257257225|gb|ACDX02000017.1| GENE 49 55910 - 56413 600 167 aa, chain - ## HITS:1 COG:NMA0356 KEGG:ns NR:ns ## COG: NMA0356 COG2870 # Protein_GI_number: 15793365 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase # Organism: Neisseria meningitidis Z2491 # 4 167 5 168 168 264 85.0 5e-71 MSDWSLPDFERKICPPEELAQRLHELPRPLVFTNGCFDILHRGHVTYLAQARSAGAALVL ALNTDASVRRLGKGDDRPVNPLENRAAVAAALASVDLVTWFDEDTPAELIEQIKPDILIK GGDWPVEKIVGAQETLARGGKVFSIPFLHQTSTTKTLEKIRAVEGGK >gi|257257225|gb|ACDX02000017.1| GENE 50 56586 - 56982 322 132 aa, chain + ## HITS:1 COG:no KEGG:NLA_8450 NR:ns ## KEGG: NLA_8450 # Name: not_defined # Def: transposase # Organism: N.lactamica # Pathway: not_defined # 1 112 106 217 221 185 87.0 4e-46 MSKYTLHFKYQAVLHYLHIRSQQRTADHYGISRTHLRRWIRAYQEGGIGALEHPQSKTMT DHRKNPFIADKPDHEKTQAELIEELCYMRAKVAYLKGVKKPSAKSGPKGQSQTVQTLRAQ HPLKYLLHIANL Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:13:15 2011 Seq name: gi|257257223|gb|ACDX02000018.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont17.1, whole genome shotgun sequence Length of sequence - 46431 bp Number of predicted genes - 46, with homology - 46 Number of transcription units - 29, operones - 12 average op.length - 2.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 125 - 475 383 ## NLA_8450 transposase 2 1 Op 2 . - CDS 563 - 1942 1749 ## COG0165 Argininosuccinate lyase - Prom 2009 - 2068 5.2 + Prom 1831 - 1890 4.5 3 2 Tu 1 . + CDS 2021 - 3061 1362 ## COG2972 Predicted signal transduction protein with a C-terminal ATPase domain + Term 3102 - 3140 -0.1 - Term 3177 - 3239 12.1 4 3 Op 1 . - CDS 3257 - 3898 902 ## COG0625 Glutathione S-transferase 5 3 Op 2 8/0.000 - CDS 4120 - 4638 794 ## COG3009 Uncharacterized protein conserved in bacteria 6 3 Op 3 11/0.000 - CDS 4638 - 6299 2209 ## COG3008 Paraquat-inducible protein B 7 3 Op 4 . - CDS 6296 - 7606 952 ## COG2995 Uncharacterized paraquat-inducible protein A - Prom 7639 - 7698 7.9 + Prom 7799 - 7858 6.6 8 4 Op 1 . + CDS 7937 - 8287 343 ## NLA_8450 transposase 9 4 Op 2 . + CDS 8191 - 9087 524 ## COG2801 Transposase and inactivated derivatives + Term 9095 - 9143 -1.0 - Term 9030 - 9070 7.3 10 5 Tu 1 . - CDS 9164 - 10381 1882 ## COG0527 Aspartokinases + Prom 10671 - 10730 6.7 11 6 Tu 1 . + CDS 10771 - 11199 719 ## COG2005 N-terminal domain of molybdenum-binding protein + Term 11215 - 11269 14.1 - Term 11210 - 11251 10.0 12 7 Tu 1 . - CDS 11275 - 12015 797 ## COG0689 RNase PH - Prom 12049 - 12108 4.3 + Prom 12085 - 12144 3.3 13 8 Tu 1 . + CDS 12177 - 13058 1314 ## COG1561 Uncharacterized stress-induced protein + Term 13079 - 13130 14.2 + Prom 13278 - 13337 6.8 14 9 Tu 1 . + CDS 13376 - 14764 2178 ## COG0114 Fumarase + Term 14788 - 14836 15.2 + Prom 14856 - 14915 3.6 15 10 Tu 1 . + CDS 14951 - 16090 1344 ## COG0116 Predicted N6-adenine-specific DNA methylase - Term 16090 - 16148 13.3 16 11 Tu 1 . - CDS 16163 - 16570 245 ## PROTEIN SUPPORTED gi|15900839|ref|NP_345443.1| lactoylglutathione lyase - Prom 16597 - 16656 6.7 + Prom 16678 - 16737 4.4 17 12 Op 1 2/0.200 + CDS 16855 - 18384 1134 ## COG3288 NAD/NADP transhydrogenase alpha subunit 18 12 Op 2 . + CDS 18398 - 18781 435 ## COG3686 Predicted membrane protein 19 13 Op 1 . + CDS 18901 - 19302 560 ## COG3791 Uncharacterized conserved protein + Prom 19342 - 19401 2.8 20 13 Op 2 . + CDS 19489 - 20874 2336 ## COG1282 NAD/NADP transhydrogenase beta subunit + Term 20895 - 20945 17.0 + Prom 21304 - 21363 4.0 21 14 Tu 1 . + CDS 21407 - 22852 632 ## COG1357 Uncharacterized low-complexity proteins + Term 22878 - 22925 13.4 - Term 23604 - 23656 12.2 22 15 Tu 1 . - CDS 23714 - 24235 894 ## PPE_03720 thiol-disulfide isomerase - Prom 24257 - 24316 3.2 - Term 24846 - 24893 13.7 23 16 Op 1 . - CDS 24950 - 25414 687 ## COG0394 Protein-tyrosine-phosphatase 24 16 Op 2 . - CDS 25422 - 26522 1520 ## NMO_1111 hypothetical protein - Prom 26551 - 26610 5.8 - Term 26599 - 26630 1.1 25 17 Op 1 . - CDS 26636 - 27229 724 ## COG0807 GTP cyclohydrolase II 26 17 Op 2 . - CDS 27222 - 27890 743 ## NMO_1067 hypothetical protein - Prom 28049 - 28108 80.3 + TRNA 28024 - 28108 74.0 # Leu TAG 0 0 + Prom 28026 - 28085 80.3 27 18 Op 1 . + CDS 28307 - 29572 299 ## PROTEIN SUPPORTED gi|157165511|ref|YP_001467745.1| 30S ribosomal protein S15 + Prom 29585 - 29644 8.6 28 18 Op 2 . + CDS 29785 - 30552 367 ## gi|261365550|ref|ZP_05978433.1| conserved hypothetical protein + Term 30586 - 30615 3.5 + Prom 30557 - 30616 2.9 29 19 Op 1 . + CDS 30652 - 30867 180 ## NMO_1398 putative prophage regulatory protein 30 19 Op 2 . + CDS 30931 - 31170 279 ## NMO_1397 hypothetical protein 31 19 Op 3 . + CDS 31187 - 31885 616 ## gi|261365553|ref|ZP_05978436.1| hypothetical protein NEIMUCOT_06044 32 19 Op 4 . + CDS 31954 - 32496 488 ## BAV1313 phage small subunit terminase + Prom 32590 - 32649 3.3 33 20 Tu 1 . + CDS 32784 - 33035 185 ## gi|261365555|ref|ZP_05978438.1| conserved hypothetical protein + Term 33081 - 33112 -0.3 + Prom 33039 - 33098 1.8 34 21 Op 1 . + CDS 33171 - 33386 203 ## gi|261365556|ref|ZP_05978439.1| PTS system, IID component 35 21 Op 2 . + CDS 33383 - 34483 859 ## COG4643 Uncharacterized protein conserved in bacteria 36 21 Op 3 . + CDS 34480 - 36225 911 ## COG5519 Superfamily II helicase and inactivated derivatives + Term 36236 - 36273 7.0 + Prom 36368 - 36427 6.1 37 22 Tu 1 . + CDS 36455 - 36835 330 ## COG3544 Uncharacterized protein conserved in bacteria + Prom 37519 - 37578 7.4 38 23 Tu 1 . + CDS 37688 - 37876 148 ## COG0582 Integrase + Term 38039 - 38089 10.4 - Term 38027 - 38076 6.4 39 24 Op 1 . - CDS 38088 - 39470 313 ## PROTEIN SUPPORTED gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 40 24 Op 2 . - CDS 39546 - 39836 288 ## NT05HA_1168 mitomycin resistance protein McrB 41 25 Tu 1 . - CDS 40050 - 40526 664 ## CCC13826_0030 hypothetical protein - Prom 40573 - 40632 2.5 - Term 40583 - 40633 1.7 42 26 Tu 1 . - CDS 40847 - 41521 1179 ## COG0625 Glutathione S-transferase - Prom 41686 - 41745 3.2 43 27 Op 1 13/0.000 - CDS 41770 - 43707 385 ## PROTEIN SUPPORTED gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 - Term 43733 - 43793 6.2 44 27 Op 2 . - CDS 43804 - 44985 1080 ## COG0845 Membrane-fusion protein - Prom 45133 - 45192 9.0 + Prom 45107 - 45166 9.4 45 28 Tu 1 . + CDS 45306 - 45737 610 ## COG4968 Tfp pilus assembly protein PilE + Term 45778 - 45828 12.0 + Prom 45773 - 45832 2.3 46 29 Tu 1 . + CDS 45979 - 46429 610 ## COG3547 Transposase and inactivated derivatives Predicted protein(s) >gi|257257223|gb|ACDX02000018.1| GENE 1 125 - 475 383 116 aa, chain - ## HITS:1 COG:no KEGG:NLA_8450 NR:ns ## KEGG: NLA_8450 # Name: not_defined # Def: transposase # Organism: N.lactamica # Pathway: not_defined # 1 116 106 221 221 206 94.0 2e-52 MSKYTLHFKYQAVLHYLHIRSQQRTADHYGISRTHLRRWIRAYQEGGIGALEHPQSKTMT DHRKNPFIVDKPDHEKTQAELIEELCYMRAKVAYLKELKALSQKRTAKDKAKPSKH >gi|257257223|gb|ACDX02000018.1| GENE 2 563 - 1942 1749 459 aa, chain - ## HITS:1 COG:NMB0637 KEGG:ns NR:ns ## COG: NMB0637 COG0165 # Protein_GI_number: 15676537 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate lyase # Organism: Neisseria meningitidis MC58 # 4 459 3 458 458 853 92.0 0 MSKDKTWSGRFNEPVSELVKKYTGSIDFDKRLAEWDIQGSLAHAQMLVQSGVLSEEDLAA IRQGMAEIIAEIKDGTISWSLDLEDVHMNIERRLTEKIGDAGKRLHTGRSRNDQVATDIR LWLRDQITVIQDLIRSLQTALVDLAEQNAETVMPGFTHLQVAQPVSFGHHMLAYVEMLGR DFERMTDCRKRVNRMPLGAAALAGTTYPIQREITAELLGFEQICQNSLDAVSDRDFAVEF TAAASLIMVHLSRLSEELILWMSPRFGFIDIADRFCTGSSIMPQKKNPDVPELVRGKSGR VIGHLIGLITLMKSQPLAYNKDNQEDKEPLFDTADTLIDTLRIYADMMRGVTVKPDNMRT AVMQGFATATDLADYLVKKGMPFRDSHEVVAQAVRHADQAGVDLSELPLAVLQGFSNLIS EDVYGVLTPEGSLNARNHLGGTAPEQVRFQVKRWRELLA >gi|257257223|gb|ACDX02000018.1| GENE 3 2021 - 3061 1362 346 aa, chain + ## HITS:1 COG:PA5262 KEGG:ns NR:ns ## COG: PA5262 COG2972 # Protein_GI_number: 15600455 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein with a C-terminal ATPase domain # Organism: Pseudomonas aeruginosa # 142 333 162 350 358 125 37.0 1e-28 MSIIRQINNTFAAPDLRNSATVVRLLIIVLGSLFFLPLISDSSLSYSAEIYHHSKWIFPV LLGILVKAYFVNIFVPSIKEAPYGVIITYLLNLSIFVVVDFVVLQTNGRSLSQHFFLFNL FLLGLMYYEGSRRNGLAPSVSEARLSALTARIRPHFLFNSLNAAISLIRLRPYDAETLLE NLANLFRAQLRDGSQSSTLGQEIEWAQEYIAIEQIRMGHMRVQVMWQHQAPDDAETPHLL LQPLLENAVFHGVESTHRPGMITVFTKLNKSSIYIRIENPYTPPESSENAKPHKGNSMAL RNLKERLTLMYDNDAKIQSRQLDGIFRVDIRLPYRKKVSDVNRLFG >gi|257257223|gb|ACDX02000018.1| GENE 4 3257 - 3898 902 213 aa, chain - ## HITS:1 COG:AGc3433 KEGG:ns NR:ns ## COG: AGc3433 COG0625 # Protein_GI_number: 15889171 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 209 1 204 208 116 35.0 3e-26 MQNITLYTHPFSRGRYVVWMLKECGAEYTVVPIQFGTQMKSAEYLAINPQGQVPALKFGD AVLTESTAIITFLAEQFPNKHLIPAAGTVERGEYYRWMCILMHLEYAGFNKLHNLPVETP ECRRQIGYGDFDTAWNTLREHLKNRDYIVGNSFTAMDLYCSALILHLTQNWKVLPADETD VLQRYATKHLARPAFAETQTWTQETAAQMPPVA >gi|257257223|gb|ACDX02000018.1| GENE 5 4120 - 4638 794 172 aa, chain - ## HITS:1 COG:NMA1930 KEGG:ns NR:ns ## COG: NMA1930 COG3009 # Protein_GI_number: 15794813 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 170 1 170 172 219 65.0 2e-57 MRLFPIAAALTLAACGTAQSPQYFVLPDSQYIRPAAQGSEIAVKVNLAEPLANGGLVYQT DAYHVNLAKNHLWAAPLDGALAANLSNKLNRLNPRHTFVPASRSQSSQTLKIYVEAFQGS YQGQTTVSGYALWPDGRNKPFDITTPQQGDGYTAMLESLENGLNEAAKSIAY >gi|257257223|gb|ACDX02000018.1| GENE 6 4638 - 6299 2209 553 aa, chain - ## HITS:1 COG:NMA1929 KEGG:ns NR:ns ## COG: NMA1929 COG3008 # Protein_GI_number: 15794812 # Func_class: R General function prediction only # Function: Paraquat-inducible protein B # Organism: Neisseria meningitidis Z2491 # 12 553 12 553 553 951 90.0 0 MKKHDSSQTHRAPARVKKTNVFTSIVWLIPLIALIAGGWLLVKDIRNRGPVVTLLMDSAE GIEVNNTVIKVLNVDVGHVTRIKLRDDQKGVEVTAQLNADAKDLIRSDTQFWVVKPRIDQ SGVTGLSTLLSGSYIAFTPGKSNETKDVFEVQDIPPIAAIGQSGLRLKLVGQNDKILNVS SPVLYENFMVGQVESAHFEPADQTVHYTIFIQSPNDKLINSESRFWLESGINIETTGSGV KLNSAPLPALLSGAISFDSPKTKNSKNVKSEDSFTLYDNRSEVANLPDDRSLYYTAFFKQ SVRGLTAGSPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRMEINADEQS KEHWKQQFQAALGKGLTATISSNNLITGSKMIELNDQPSSSPKLRPHTIYAGDTVIATQG GGLDDLQAKVADLLEKFNNLPLDKTVAGLNGSLTELKSTLKSANAALSSIDKLVGKPQTQ NIPNELNQTLKELRQTLQGVSPQSPIYSDVQNTLQSLDKTLRDVQPVINTLKEKPNALIF NSSSKDPIPKGSR >gi|257257223|gb|ACDX02000018.1| GENE 7 6296 - 7606 952 436 aa, chain - ## HITS:1 COG:NMA1928 KEGG:ns NR:ns ## COG: NMA1928 COG2995 # Protein_GI_number: 15794811 # Func_class: S Function unknown # Function: Uncharacterized paraquat-inducible protein A # Organism: Neisseria meningitidis Z2491 # 19 420 18 419 434 597 76.0 1e-170 MKPIPSYTRWWRYKSYLPDASLPAHTVDCPDCGNRMDIPRLRQGQEAHCPVCNHEVVEVE NNPYVAPLAYATTSLILMAFAYSMVYIRVELFGVTSVLTLPEMMRLLIYQDYGFLAEVMF ILTFGAPVLFLLLCLYVYTALVRERAYPALRFATRVLVRLRHAIMVDVFFISTLVAYIKL SSVAAVEFGSAFYLMFALSVMLIRTSVSIPQHWVYYKIHRLTGGDAVQTASDDKTCCSRC LYFRDKDEQPCEVCGADLYRRRPKSLSISLAFLLAAFILYFPANILPIMISSNPTALEVN TIFNGIVYMWNDGDRLIAVIIFSASILVPVLKIIAMAVLIASAYFKPPMSAPKMSVLYRI TESIGRWSMIDIFVIIILMSSFHTNMARVVPGGAAVYFCLVVVLTMLSAYYFDPRLIWDR HQQLLDDPDSDDNQKQ >gi|257257223|gb|ACDX02000018.1| GENE 8 7937 - 8287 343 116 aa, chain + ## HITS:1 COG:no KEGG:NLA_8450 NR:ns ## KEGG: NLA_8450 # Name: not_defined # Def: transposase # Organism: N.lactamica # Pathway: not_defined # 1 116 106 221 221 198 92.0 8e-50 MSKYTLHFKYQAVLHYLHIRSQQRTADHYGISRTHLRRWIRAYQEGGIGALEHPQSKTMP QHRKNPFIADKPDQEKTQAELIEELCYMRAEVAYLKELKALSQKRTAKDKAKPSKH >gi|257257223|gb|ACDX02000018.1| GENE 9 8191 - 9087 524 298 aa, chain + ## HITS:1 COG:yi5B KEGG:ns NR:ns ## COG: yi5B COG2801 # Protein_GI_number: 16131429 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 27 293 2 277 283 211 44.0 9e-55 MLYARRGRLPKGVKSPQPKADRKGQSQTVQTLRAQHPLKYLLHIAHLPKSSFYYHHQDRP DPDEADKALLVETYRRHKGRYGQRRIAAALGWNRKKAARLMKQLELKALIRAKKAYRHPA MGEISEHLLKRRFKARKPNEKWLTDVTELKGKDGKLYLSPILDLFNREIVAYAMSRNANS EMVKEMLEKAAPRLTDKGTMLHSDQGVLYRTAGYRELLAEHSMVQSMSRKANCWDNAPME SFFAVLKTECFYRAGELTVDELMKQIDDYMDYYNRERCSLKLKKLSPVAYRTQLVQSA >gi|257257223|gb|ACDX02000018.1| GENE 10 9164 - 10381 1882 405 aa, chain - ## HITS:1 COG:NMB1498 KEGG:ns NR:ns ## COG: NMB1498 COG0527 # Protein_GI_number: 15677351 # Func_class: E Amino acid transport and metabolism # Function: Aspartokinases # Organism: Neisseria meningitidis MC58 # 1 405 1 405 405 705 97.0 0 MALIVHKYGGTSVGSPERIKNVAKRVAKARAEGHDIVVVVSAMSGETNRLVALAHEMQEH PDPRELDVVLATGEQVTIGLLAMALKDIGVDAKSYTGWQVALKTDTAHTKARIESIDDQR MRADLDAGKVVIVAGFQGISNEGDISTLGRGGSDTSAVALAAALKADECQIYTDVDGVYT TDPRVVPEARRMDTVTFEEMIELASLGSKVLQIRSVEFAGKYKVRLRVLSSLQDGGNGTL ITFEEDENMERAAVTGIAFDKNQARINVRGVPDKPGVAYQILGAVADANIEVDMIIQNVG SEGTTDFSFTVPRGDYRQTIEILSKLQDSIGAAAIDGDDTVCKVSAVGLGMRSHVGVAAK IFRTLAEEGINIQMISTSEIKVSVLIDEKYMELATRVLHKAFDLG >gi|257257223|gb|ACDX02000018.1| GENE 11 10771 - 11199 719 142 aa, chain + ## HITS:1 COG:RSp1153 KEGG:ns NR:ns ## COG: RSp1153 COG2005 # Protein_GI_number: 17549374 # Func_class: R General function prediction only # Function: N-terminal domain of molybdenum-binding protein # Organism: Ralstonia solanacearum # 1 140 123 268 269 81 38.0 4e-16 MQISARNQFNGIVKDIRNGAVNSEVTVSLPTGQEIVAAVTCESISNLGLEKGKAVVVLIK ASSILIANNLDNIKLSARNQLSGIISHIERGSVNSIVDLDLGDGLALSAGITVKSGDLLN LTPGQKATAVFKAGAVILGVLA >gi|257257223|gb|ACDX02000018.1| GENE 12 11275 - 12015 797 246 aa, chain - ## HITS:1 COG:NMA1702 KEGG:ns NR:ns ## COG: NMA1702 COG0689 # Protein_GI_number: 15794595 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RNase PH # Organism: Neisseria meningitidis Z2491 # 1 239 1 239 242 404 91.0 1e-113 MSNYTRTSRDADSLRDIKITPNFLPHADGSCLIECGNTKVICTASIDENVPPFLRGKGQG WVTAEYGMLPASTASRMRREAAAGKQSGRTQEIQRLIGRSLRAVVDMEKLGERQILIDCD VIQADGGTRTASITGAFVALQIAVNKLISDDLISENPIREAVAAVSAGVVGGVPLLDLDY PEDSGCDSDVNIVMTASGKIIEIQGTAEGAPFSLDELGKLIALAQKGIAELTAHQQNALK LSRSVG >gi|257257223|gb|ACDX02000018.1| GENE 13 12177 - 13058 1314 293 aa, chain + ## HITS:1 COG:NMB0711 KEGG:ns NR:ns ## COG: NMB0711 COG1561 # Protein_GI_number: 15676609 # Func_class: S Function unknown # Function: Uncharacterized stress-induced protein # Organism: Neisseria meningitidis MC58 # 5 293 6 294 294 400 76.0 1e-111 MTKPIHIHSMTGFANAAGECGGKRVNLEIRAVNHRYLDIQFRMPEELRYLEGVLREKIAA SAARGKLECRIQLQDAAVGGQSLETNEELVKQLADLNKTWRKEHGFGKLTVAEVLRFPGV LAGQSEDPEALAKTVQELLDEALKEFAAARKREGKKLGEHLLQRLASMEEIVDALSELFP SLLQAHMDKVNARLAEAVDNIDNDRLQQEFALFIQKSDVDEEFSRLRTHIAEVRRIVTEN KGSAGKRLDFLMQELNREANTLGSKAIAAECTQASVELKVLIEQMREQVQNIE >gi|257257223|gb|ACDX02000018.1| GENE 14 13376 - 14764 2178 462 aa, chain + ## HITS:1 COG:NMA1670 KEGG:ns NR:ns ## COG: NMA1670 COG0114 # Protein_GI_number: 15794564 # Func_class: C Energy production and conversion # Function: Fumarase # Organism: Neisseria meningitidis Z2491 # 1 462 1 462 462 860 98.0 0 MSTRTEHDTMGNVEVPSEAYWGAQTQRSRNNFKIGGETLPQPLIYALALVKKAAAATNVS LGRIKTEQADLITQAADDVLNGKLDGQFPLVVWQTGSGTQSNMNMNEVLANRANEIAGTG LAAYQPVHPNDHVNHAQSTNDAFPTAIHVAAAIEINRHLIPAAQALRDTLDKKAKEFAPI VKIGRTHLQDATPLTLGQEFSGYVSQLDHGLGRLNDALKGLYELALGGTAVGTGLNSHPE YAEKAAAKLAELSGLPFVSAPNKFEALGGRDAAVAASGALKTLAASLNKIANDIRWLASG PRCGLGEIKIPENEPGSSIMPGKVNPTQCEAMTMVCCQVFGNDVTIGMAGASGNFELNVY MPVIAYNLLQSIRLLGDACNSFNEHCAAGIEPVPEKIDYFLHHSLMLVTALNRKIGYENA AKVAKTAYKNDKSLRETAVELGLLTGEEFDELVVPADMVHPR >gi|257257223|gb|ACDX02000018.1| GENE 15 14951 - 16090 1344 379 aa, chain + ## HITS:1 COG:NMA2030 KEGG:ns NR:ns ## COG: NMA2030 COG0116 # Protein_GI_number: 15794910 # Func_class: L Replication, recombination and repair # Function: Predicted N6-adenine-specific DNA methylase # Organism: Neisseria meningitidis Z2491 # 2 379 3 380 380 595 75.0 1e-170 MTTYSLFVTCPRGLEAPLSQELEQLKCQDIRAVDGGVACKGGMEQVYRINLHSRTASRVL LRLTKSGYRSEQDIYKAAKNIRWTDWFDLEQTFKVKVEGKRAQVKSLDFVGLKIKDAVCD VFRDACDARPSVGKIRPDIRIHAFIDERDIQIFIDTSGEALFKRGYRQDTGEAPMRENLA AGLLLLAGYDGTQPFQDPFCGSGTIVIEAAWIATRRAPGLMRRFGFEKLKNFDAALWKKL QHEAETQIRPAPAPISGSDNDRYMIRAAVANAQAAEVDTFIRFEVKDAQDTRPNGEGGIL ISNPPYGVRLAEVQALQALYPQLGAWLKQHYAGWLAGMFTGDRDMPKFMRLSPKRKIPLY NGNLDCRLFLMDMVKGSNR >gi|257257223|gb|ACDX02000018.1| GENE 16 16163 - 16570 245 135 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15900839|ref|NP_345443.1| lactoylglutathione lyase [Streptococcus pneumoniae TIGR4] # 2 126 4 125 126 99 42 5e-20 MRLLHTMLRVGNLEKSLDFYQNVLGMKLLRRHDYPEGRFTLAFVGYGSEAENTVLELTHN WDTESYDLGNGYGHIAIEVDDAYKACERVKEMGGKVVREAGPMMHGTTVIAFVEDPDGYK IEFIQKNSGNDSVKY >gi|257257223|gb|ACDX02000018.1| GENE 17 16855 - 18384 1134 509 aa, chain + ## HITS:1 COG:NMA1177 KEGG:ns NR:ns ## COG: NMA1177 COG3288 # Protein_GI_number: 15794122 # Func_class: C Energy production and conversion # Function: NAD/NADP transhydrogenase alpha subunit # Organism: Neisseria meningitidis Z2491 # 1 389 1 389 513 725 96.0 0 MKIGIPRESLSGETRVACTPATVALLSKLGFETVVESGAGLAASLDDAAYQAAGATVADK ATVWACPLLYKVNAPSEGELPLLKEGQTIVSFLWPRQNEALVEALRAKKVNALAMDMVPR ISRAQALDALSSMANISGYRAVIEAANAFGRFFTGQITAAGKVPPAQVLVIGAGVAGLAA IGTANSLGAVVRAFDTRLEVAEQIESMGGKFLKLDFPQESGGSGDGYAKVMSDEFIATEM KLFAEQAKEVDIIITTAAIPGKPAPKLITKEMVESMKSGSVIVDLAAATGGNCELTKPGE LFVTDNGVKIIGYTDMANRLAGQSSQLYATNLVNLTKLLSPNKDGEITLDFEDVIIRNMT VTRDGEITFPPPPIQVSAQPQQTSSESRACRQARSETCSPVEKTRSRRHCRHIGTVGRRG CPRRILESLYRVRPRLRHRLLRRLERQPLAAYPADVRDQRHFRHHRRRRAAANQPRQRFR VPACVHRHPDCQRQHLRRLLRNAADAEYV >gi|257257223|gb|ACDX02000018.1| GENE 18 18398 - 18781 435 127 aa, chain + ## HITS:1 COG:NMA1176 KEGG:ns NR:ns ## COG: NMA1176 COG3686 # Protein_GI_number: 15794121 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis Z2491 # 1 126 1 126 127 151 73.0 3e-37 MTLAYWCILIASLLPLFCSFIAKAQGGFQPSDNRNPRDFLARTQGLSARANAAQQNGFEV FAPFAAAVLVAHATGNAAQATINLLAVSFIAFRIAYIFSYLKDKPSLRSAMWTGGFVCTI GLFVAAV >gi|257257223|gb|ACDX02000018.1| GENE 19 18901 - 19302 560 133 aa, chain + ## HITS:1 COG:AGc2344 KEGG:ns NR:ns ## COG: AGc2344 COG3791 # Protein_GI_number: 15888600 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 3 132 10 139 142 79 34.0 2e-15 MKAKCLCGNVSLEVEHDKHVHACHCGMCRTWGSGATFSLIAAKPPKIDGEANIARYHSSE WAERAFCKNCGTHLFYHFLPNDSYFVFAGLFADNVDFKLEEQIFIDAKAPYYELANDTPK LTEKEFLAQFGSE >gi|257257223|gb|ACDX02000018.1| GENE 20 19489 - 20874 2336 461 aa, chain + ## HITS:1 COG:NMB0978 KEGG:ns NR:ns ## COG: NMB0978 COG1282 # Protein_GI_number: 15676870 # Func_class: C Energy production and conversion # Function: NAD/NADP transhydrogenase beta subunit # Organism: Neisseria meningitidis MC58 # 1 461 1 461 461 802 93.0 0 MSSGLVTAAYIVAAILFIFSLAGLSKQETAKQGCYSGVAGMAVALFVTVFSENTHGLGWI IIAMLIGAAIGIYKAKKVEMTEMPELIALLHSFVGLAAVLVGFNSYIEPGNVSHDMHTIH LVEVYLGIFIGAVTFTGSLVAFGKLNGKISSAPLQLPAKHKLNLAALVLSFILMLVFVSV DGSGLILILMTLIALAFGWHLVASIGGADMPVVVSMLNSYSGWAAAAAGFMLSNDLLIVT GALVGSSGAILSYIMCKAMNRSFISVIAGGFGTDGSAAASGSEEIGEYREAKPADVAEML RNASSVIITPGYGMAVAQAQYPVAEITELLRKNGTEVRFGIHPVAGRLPGHMNVLLAEAK VPYDIVLEMDEINDDFPETDVVLVIGANDTVNPAAQTDPNSPIAGMPVLEVWKAKEVVVF KRSMNTGYAGVQNPLFFNENSVMCFGDAKKTVDEILAELKK >gi|257257223|gb|ACDX02000018.1| GENE 21 21407 - 22852 632 481 aa, chain + ## HITS:1 COG:PM0591 KEGG:ns NR:ns ## COG: PM0591 COG1357 # Protein_GI_number: 15602456 # Func_class: S Function unknown # Function: Uncharacterized low-complexity proteins # Organism: Pasteurella multocida # 54 406 15 362 524 255 41.0 1e-67 MGNVAFACNQVVTFVIDHKWVIISILVVLVILGWVCLRRKSNNVWKVIYAGICSIILGFL LLSGITVYDDTTITKITSPGFWNFIILIVSAPVVFAIWHFRDENNRQQIENQRKDINLKE FQKLSEWVSGAHLPEIKTVSKTTQKSSPKNEAEITEQTTEQSEEYAKKPETTDFDTFSKR DGAVALQISAIYNLLPFFRGDYGESFRRPAFNLLKSAWQAMQQESLKKLDGAPLSDEERK KIFDELTHKAKSPMGMALTQVLLSLNRENKKLNLRDFPEMLPNICLAGMDFHLIGVDEIA RDLSGLNLQGANFQKTNLEKIKLQGADLIGANFRGANLKNADLHMEKWKSAFDSKNINFQ KANLSQADLQNRDLTGSNFQGANLLDAKLQGAALSYSNLRGMDFKWWQIRKSRAMSKAEI TEHDFIKHIYPRWKEGNNPEWETLTEDEQKKAMQQFCKETWIRIFDEEGKRIMPPPKKHK I >gi|257257223|gb|ACDX02000018.1| GENE 22 23714 - 24235 894 173 aa, chain - ## HITS:1 COG:no KEGG:PPE_03720 NR:ns ## KEGG: PPE_03720 # Name: not_defined # Def: thiol-disulfide isomerase # Organism: P.polymyxa # Pathway: not_defined # 47 169 45 166 171 117 39.0 3e-25 MKILPVLTAALLLCSCAADRETEALKNSLSEAQTAVRLSAENTKRLEDTYSDIYFHLDSL TVESFKKRVANGDTVYAYIGRPSCGDCNAFEPMFKRYIASRNLNGKIYFVNVHRLHQDKE AWTAFRQQYKLGGTPVLAKYSKGKQVNKLDLEENGGKISTEDLEKWLDANGLR >gi|257257223|gb|ACDX02000018.1| GENE 23 24950 - 25414 687 154 aa, chain - ## HITS:1 COG:NMB1267 KEGG:ns NR:ns ## COG: NMB1267 COG0394 # Protein_GI_number: 15677135 # Func_class: T Signal transduction mechanisms # Function: Protein-tyrosine-phosphatase # Organism: Neisseria meningitidis MC58 # 1 152 1 150 151 221 69.0 4e-58 MKNHSVLFVCLGNICRSPMAEYVLRHRAREAGVAHRVRTDSAGTSGWHDGENMHQGTRKT LAAHGIDNQGFTSSKVRSEDFDEFDFIIAMDDNNLAELEKMFGKHPDKIFKLTDLIPESG YRHVPDPWHTGDFDETFRLVDAGSVALLKKFSLV >gi|257257223|gb|ACDX02000018.1| GENE 24 25422 - 26522 1520 366 aa, chain - ## HITS:1 COG:no KEGG:NMO_1111 NR:ns ## KEGG: NMO_1111 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 3 363 4 364 365 525 69.0 1e-147 MNTFILHDTRPYPQTPVKNHLLVNASLLAHGTTAATRKIAVGQLQAEIRSQLQQNYYVNL SVAMTMAPDAETYNALMQSINQVLSAENDDEAQWFALPVVIVAGCKQERTLSLTLPTEAL TACLSNYPHLRALTQNTQWLPFLAHSDDLSGITPEQWWNAKQNSESAAAFLQTFENKPLI CPEGQSVHVVYALGYGDKNLQTALGVNLQQAGLPLMQVWQESLAADGVTLFTNPLSPNTP LQALTDGSHTRQRMAMDVFATNAIRAIRMQSPRVGVVIAARAGGQILFGFNATDSAFEVV PQVFVWNLSSSDNIAVIQHNFLDLMAECRVEHIRILHDVLPENADLPTYAQSLSLDGHNP FFSEHA >gi|257257223|gb|ACDX02000018.1| GENE 25 26636 - 27229 724 197 aa, chain - ## HITS:1 COG:NMA1425 KEGG:ns NR:ns ## COG: NMA1425 COG0807 # Protein_GI_number: 15794336 # Func_class: H Coenzyme transport and metabolism # Function: GTP cyclohydrolase II # Organism: Neisseria meningitidis Z2491 # 1 195 1 195 197 348 84.0 4e-96 MNNTLKFIASCRLPTEWGDFTMHGFEEPSGQEHIALTMGDFSDDLPVLTRIHSECLTGDA LFSKKCDCGPQLEAAMKAVQQEGRGVIVYLRQEGRGIGLINKIRAYKLQDEGMDTVEANL ALGLPVDARDFTLAKQIYNHLNIRAVKLLTNNPEKIQTLKDAGINVVERIPLHVGENVEN ERYLHTKADKLGHMIFD >gi|257257223|gb|ACDX02000018.1| GENE 26 27222 - 27890 743 222 aa, chain - ## HITS:1 COG:no KEGG:NMO_1067 NR:ns ## KEGG: NMO_1067 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 1 218 1 219 224 247 61.0 3e-64 MPVLLIQDFLQTQGLRLSSDDLRVAYLTAKTVMDMGNASIDRSVLWREEDGWKLADHIEE TPENEVLLKQVFMALDSVFSRAKAVKSAAVYIHIPGEPHARLVRISAQGEPLENLLAVHE ENGTVYLVCRTAQSGWMNIANDIAYWLSLDEIQGDRNKGSGSQLSIPVATQNGTVLGVVH VEFADKDQADEAAQTDWSALALALAEPLKALAGIEDKEEEHE >gi|257257223|gb|ACDX02000018.1| GENE 27 28307 - 29572 299 421 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157165511|ref|YP_001467745.1| 30S ribosomal protein S15 [Campylobacter concisus 13826] # 38 396 44 400 406 119 27 2e-26 MPLNDRQIKAAKPADTGKKIKLFDGNSLYLEVTPAGGKIFRMRYRIDGKEKDFTIGKYPT VSLVEARQAAENARRMIAQGQDPNKAKQEAKAARQAALLNTFEHLAKQWHEDNLPRWKEH HAERIMRYLKNDVFPVIGEIPVNEIKVTHIKNLLDDIMARGVTDTADKIRGWIGAVFDYS AMLEISENNPARLLKNHIPNLPTKHKPALPREELPEFYRRLILANNIERQNKIAIMLVML VFVRNNELRGGQWEEVDFKNKRWIIPAERMKHEKMKPKPALCVPLSDWAIELLQELHTLT GHSRFMFPSRTNVNRHISENTLGKIINEKLGYKGKATPHGFRAVASSLLYENNFNGGAIE TQLAHVEENKIKDSYAYQADYMPQRIEFMQWYSDYLRERYNQALQMIQESKDGLKIPYAR E >gi|257257223|gb|ACDX02000018.1| GENE 28 29785 - 30552 367 255 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261365550|ref|ZP_05978433.1| ## NR: gi|261365550|ref|ZP_05978433.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 255 1 255 255 468 100.0 1e-130 MVSIAYPRNVAAYSPKYAAIFNIRKNPEFHDALGVFSWQAERVLTRAFQRFEILEHGITL WSHKETYKVSLVEEQVNDALEKYQEKYGDPIDYSEYFYPVIEELHFGQSLEMRLEMQYFI TAKAIYEYVSNFKDKPSQENFNQFRTIANLITTSIEFMSLELRKDQISIEAITENARKAG KAKQSHYEKAGTIAAVNQLLEEEKEMLNQWGGKAKLIRLIFEKINNDEISAPDVPSEKAV KHWIKQFQENMKSTN >gi|257257223|gb|ACDX02000018.1| GENE 29 30652 - 30867 180 71 aa, chain + ## HITS:1 COG:no KEGG:NMO_1398 NR:ns ## KEGG: NMO_1398 # Name: not_defined # Def: putative prophage regulatory protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 1 71 1 71 71 107 73.0 1e-22 MNNTVLRVDDTARALGVSRATIWNWANPKSRHYRPDFPRPFKISANATGWLASEIDDYIG KLAAKREEQAN >gi|257257223|gb|ACDX02000018.1| GENE 30 30931 - 31170 279 79 aa, chain + ## HITS:1 COG:no KEGG:NMO_1397 NR:ns ## KEGG: NMO_1397 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 1 79 1 79 84 112 73.0 4e-24 MSSYSTNGKAKTPSQKERVLSRLKQGSVTSWELTQMGILGYNTHIMELRRAGHDIVTVME EVTNQFGETVKRGRFVLIN >gi|257257223|gb|ACDX02000018.1| GENE 31 31187 - 31885 616 232 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261365553|ref|ZP_05978436.1| ## NR: gi|261365553|ref|ZP_05978436.1| hypothetical protein NEIMUCOT_06044 [Neisseria mucosa ATCC 25996] hypothetical protein NEIMUCOT_06044 [Neisseria mucosa ATCC 25996] # 1 232 1 232 232 375 100.0 1e-102 MNIEYTKTTFETRQKLLKEEEDKCSELTAQIEAAEAGVTEAQAVINEFAGLRNRRKGIFA NLLKMGKPTNSEEAKGLDSEIAAKREEADRAADMLEAQKELLESLFDERRQHLNRISELR NLLSVSRYEMFIADIEETHLPEYLEAARAYANAAAKLVGIGKAAVEMKTKLQENGLRVDC PSYGQSLPNRIIDLRLPGFFNMMDGTGGEENAIFDILEDMEKEKEAALDNLK >gi|257257223|gb|ACDX02000018.1| GENE 32 31954 - 32496 488 180 aa, chain + ## HITS:1 COG:no KEGG:BAV1313 NR:ns ## KEGG: BAV1313 # Name: not_defined # Def: phage small subunit terminase # Organism: B.avium # Pathway: not_defined # 1 106 3 108 144 111 64.0 1e-23 MTPKQEQFARLYVETGNASEAYRQAYNADNMKPETVTNEAYKLLQDHDISAMVDGLKEEA RQRHAVTVDDLLHELEQARAAALAAPTPQSSAAVSATMGKAKMLGLLVDKAEIKAEAEIS QVIQEERKCPLSQEEMQQVMNAFFNKPYSEITLEDIVGTAGEDTERIGYVITMIIVGKKF >gi|257257223|gb|ACDX02000018.1| GENE 33 32784 - 33035 185 83 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261365555|ref|ZP_05978438.1| ## NR: gi|261365555|ref|ZP_05978438.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 83 1 83 83 132 100.0 6e-30 MQSSNSIQIQDVQSASEQGFCAVVHEPTAYLADIDVHSCTARRLGIYPSHAAAVAACRSF IASLSDDLKAWAAFSVTTAEQIR >gi|257257223|gb|ACDX02000018.1| GENE 34 33171 - 33386 203 71 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261365556|ref|ZP_05978439.1| ## NR: gi|261365556|ref|ZP_05978439.1| PTS system, IID component [Neisseria mucosa ATCC 25996] PTS system, IID component [Neisseria mucosa ATCC 25996] # 1 71 1 71 71 133 100.0 5e-30 MKPTDKNDRFRRYFNRALLVFGVLLTALAIRACTQPAHAETEQAIQTTPTIWETDPMAGV VLEPVTGEAEQ >gi|257257223|gb|ACDX02000018.1| GENE 35 33383 - 34483 859 366 aa, chain + ## HITS:1 COG:Z0339_1 KEGG:ns NR:ns ## COG: Z0339_1 COG4643 # Protein_GI_number: 15799978 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 EDL933 # 9 146 29 158 388 86 37.0 9e-17 MKPTYQDIKAAAQYRWQEIHAAIGIDPRCLKNKHQPCPACGGKDRFRYDDKDGNGTFICS HYNNGAGDGFGLVMHYLNCDFDEALRAVAGVLNMGGANPLPIPSTRPQTQPRPEKDHIGK LAALWNGAEPITADSPAVQYLKSRGLDMAQLPENIRFLREADYWTTGEDKPLFIGRFACM VCAIRDTGGELQGLHMTYFQTTYDKPYGEDGLHAPHYRKLAIKHPETSEALPAKKMRNRK QGSISGQAVHLFPIPENGRLVIAEGIETALAARELYKAYDWGLYAALSANSMENFQFLNG IKEIVIIADNDTPRPVGYRAAYDLAMRAIKQGIKASIWQSKTPGYDALDELNEKKQSDNH FGGQTA >gi|257257223|gb|ACDX02000018.1| GENE 36 34480 - 36225 911 581 aa, chain + ## HITS:1 COG:PM1782 KEGG:ns NR:ns ## COG: PM1782 COG5519 # Protein_GI_number: 15603647 # Func_class: L Replication, recombination and repair # Function: Superfamily II helicase and inactivated derivatives # Organism: Pasteurella multocida # 35 571 170 713 725 284 32.0 4e-76 MKNTETAKQESPNDYNLENIELFRPRPHFEIDNQGIWWINVRTNKDGDIIKAEPQFLSDP IDIIGTGQDNDGAYYRIIKFKDKITRQQKTAALPQAEIGTVQGWQRLQNFGLVIMSGRAK RERLADYLQKEGSPTAFTITDRAGWNGEAYILAGGEAVNADGTNILYNGDTSQKDGYTEK GSLKEWQEQAARYAENNSRLCLALGLSMAAPFLALLNEEGGGFHLAGDSSKGKTTAARLA LSVWGDPETTKGNWDTTPLGLQNLALARNDGLLVLDEIGQSADPRKIPQMVYSVINGVSK TQGAKDGGNRRQKTWRNLILSTGEINPESLIGDRAQWKAGNHVRLPDIQAEARFGIYDTL HGFADGAKLSEHINQATAKQRGTAGRALIRQILKDGKEAAAQAVEASRARFLETLPPMEG QARRIARRFALLAAVLEYAAPITGMRQGAEEAGVRQCFNEWLEENGTGNREDRRIIEQVT AFMDVNALSMRFSDWNAQTVNQNHAGYRKQEGSIDEYWIIPVVFEDEVCKGYSPRKVCEV LHNRQWLKKADNGRWQHQRKRNGVASRFYVLMEEAPPDFDE >gi|257257223|gb|ACDX02000018.1| GENE 37 36455 - 36835 330 126 aa, chain + ## HITS:1 COG:mlr5326 KEGG:ns NR:ns ## COG: mlr5326 COG3544 # Protein_GI_number: 13474444 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mesorhizobium loti # 19 123 27 130 130 80 48.0 1e-15 MKKLMTFITLSAIAISNYAQANEQPHQAHMNMQMSTGSAMQQELMQGMDQMNQDMMAAAQ YKDPDVAFAAGMLPHHIGAVKMAEVELKYGKNPEMRKLAEDIINAQQAEIEQMQKWLKAH NKKSKP >gi|257257223|gb|ACDX02000018.1| GENE 38 37688 - 37876 148 62 aa, chain + ## HITS:1 COG:RSc1871 KEGG:ns NR:ns ## COG: RSc1871 COG0582 # Protein_GI_number: 17546590 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Ralstonia solanacearum # 1 53 1 51 405 64 62.0 4e-11 MPLNDRQIKNAKPAETGKKTKMFDGGGLYLEVTPAGGKVFRLKYRIDGKEKTLTKSTNKT NR >gi|257257223|gb|ACDX02000018.1| GENE 39 38088 - 39470 313 460 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 [Campylobacter concisus 13826] # 10 406 5 414 460 125 27 6e-28 MQTKPFFQTALSLSLALALSACAVHSTDQNLTLESTGQVMSAAETAERYDVNGNWWEIYQ SPQLNALMAQALENNIDLKQAAINVNKALYQANILGADLVPSFSGSVGASTSKNLKTGSH GNTFSSQLGLSYELDLWRKLSATADAQVWEYQATRQDMANTRLTLINNVADAYFNIAYLN EAIELAQKSLKQYQEINRIAEAKFRYGRADSSQPTQAKQSLLSAQNSLISLKNSLDTQKQ VLRNLLNLKPNETIAADPAQYRLPSVKGVNLDVPITVLANRPDLRAAEYRLQSSLQSVEA QKRSWYPSITLGASLSTSSEKAKSAFNIPLLGGSATINLPFLNWQTMKWKDKTAQANFDS AKLNFEKALTTALNEVNTNYLAYQNAQAALNNQEQRYALDKKNSRYYQVRYQHGKNELKY WLEALSTEYGSAQNVLNQRYETLKYENMVYKAMAGRYTPK >gi|257257223|gb|ACDX02000018.1| GENE 40 39546 - 39836 288 96 aa, chain - ## HITS:1 COG:no KEGG:NT05HA_1168 NR:ns ## KEGG: NT05HA_1168 # Name: not_defined # Def: mitomycin resistance protein McrB # Organism: A.aphrophilus # Pathway: not_defined # 1 94 1 94 99 145 72.0 8e-34 MSPDKVQRSKLNTLTDLPNVGKAVAEDLALLGITQPQDLAGQDAYEMYDRLCSLTSTRHD PCMIDIFLSLVDFMQGNEPKPWWHFTEQRKAFLADK >gi|257257223|gb|ACDX02000018.1| GENE 41 40050 - 40526 664 158 aa, chain - ## HITS:1 COG:no KEGG:CCC13826_0030 NR:ns ## KEGG: CCC13826_0030 # Name: not_defined # Def: hypothetical protein # Organism: C.concisus # Pathway: not_defined # 1 157 1 162 163 80 34.0 1e-14 MDVYATYTAHPQSGIEQIKASAGTPAAVSECSAGKLWDALHFVLTGKGSDDADAANPLSK AIIGNILRQDEEAGEHTGWIDDTEIAEVAQALNQADFAALLDGKTAADFQNNQIYPDIWG DEKAFAETRTELAQRFKELAAFYQAAAEQHCGVVVRIS >gi|257257223|gb|ACDX02000018.1| GENE 42 40847 - 41521 1179 224 aa, chain - ## HITS:1 COG:CC2843 KEGG:ns NR:ns ## COG: CC2843 COG0625 # Protein_GI_number: 16127075 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Caulobacter vibrioides # 1 218 1 216 220 216 50.0 4e-56 MITLHVLAQSRALRIVWLLELIGTPYQIKTYARHPETLLAPDELKAVHPLGKSPVIDDDG FVLNESGAITDYLIQTYGGGRFMPERGSQDYWHYQRWLHYAEGSLMPLLLLGLVFRKIEN APMPFFIKPVARKISGNVKEGFIEPQAALHLAYVENELNGKDWLVNNRLSGADIMMSYPL QAAADRFGLAEYPNIRAYLQRIENNPAYQTAVQKVGGPLLCLDK >gi|257257223|gb|ACDX02000018.1| GENE 43 41770 - 43707 385 645 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 [Flavobacteriales bacterium ALC-1] # 253 642 7 410 413 152 28 3e-36 MSLIECKNINRYFGSGANRVHVLKDVSLSIEKGDFVAIIGQSGSGKSTLMNILGCLDSAT SGSYQIDGIETAKMQPDELAALRRERFGFIFQRYNLLGSLTARDNVALPAVYMGMGGKER SNRAEKLLQDLGLEGKEGNKPSELSGGQQQRVSIARALMNGGEIIFADEPTGALDTASGK NVIEIIQKLHKEGHTVIMVTHDPGIAAIANRIIEIRDGEIISDSSKNPEIPESKIERIKE KSSWLFYYDQFVEAFKMSVQAIMAHKMRSLLTMLGIIIGIASVVSVVALGNGSEKKILAD INAMGTNTISIFPGRGFGDRRSGRIKTLTIDDAKVIAKQSYVASATPQTTSGGTLTYRNT DLTASLYGVGEQYFDVRGLKLESGRLFDEADVKEDAQVVVIDQNTKEKLFGTDVDPLGKT VLFKKRPLTVIGVMEKEENSFGNSDVLMLWSPYTTVMHQITGESYTNSITVKIKDDANTQ VAEKGLTELLKTRHGTEDFFMNNSDSIKQMVETTTGTMKLLISSIALISLVVGGIGVMNI MLVSVTERTKEIGVRIAIGARRNNILQQFLIEAVLICIIGGLVGVGLSTLISLVFNHFVT EFPMEISIGSVIGAVVCSTAIGVAFGFMPANKASKLNPIDALSKD >gi|257257223|gb|ACDX02000018.1| GENE 44 43804 - 44985 1080 393 aa, chain - ## HITS:1 COG:NMB0548 KEGG:ns NR:ns ## COG: NMB0548 COG0845 # Protein_GI_number: 15676454 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Neisseria meningitidis MC58 # 1 393 1 391 392 528 81.0 1e-150 MAKIINKWTVGITVAAVLGFAAWSYFQPEPQTSYITETVKRGDISQTVSATGEISPSNLV SVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTTQVNTLNTEKSKLETYQAKLVSAGIAL NSAEKKYKREAALWKENATSKEDLESAQDALAAAKANVAELKAAIKQTKISINTAESELG YTRIVATMDGTVVAIPVEEGQTVNAVQSTPTIIQLANLDTMLNKMQIAEGDITKVKAGQD ISFTILSEPDTPIKAKLDSVDPGLTTMSLGSYTTSTDTTSNAIYYYARALVPNPDGKLSI GMTTQNTIEINGVKNVLLVPTLTIKKHDGKSFVSVLGADGKASEREITVGLKDSMNTEVR SGLKEGDKVVMSEMSAAEQAEAAQRAMQGGPPR >gi|257257223|gb|ACDX02000018.1| GENE 45 45306 - 45737 610 143 aa, chain + ## HITS:1 COG:NMB0547 KEGG:ns NR:ns ## COG: NMB0547 COG4968 # Protein_GI_number: 15676453 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein PilE # Organism: Neisseria meningitidis MC58 # 1 138 1 129 129 108 44.0 5e-24 MKNTLQKGFTLVELLIVIVILAILATLAYPSYERFIRKSRLENVRSELLINAQNLERFYA QNRTFENFPATDLVQNEYFTIQFFNYRNTQKGKKNPSASGFLLEAKPNDGYKSKETCSVY LDSDGIFWASNADCPGYEHIDQK >gi|257257223|gb|ACDX02000018.1| GENE 46 45979 - 46429 610 150 aa, chain + ## HITS:1 COG:NMB1602 KEGG:ns NR:ns ## COG: NMB1602 COG3547 # Protein_GI_number: 15677452 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Neisseria meningitidis MC58 # 16 148 6 136 372 226 92.0 9e-60 MQGRFMMSTQHNYAGIDIAKRNFVIAVSSLSKTKTKTETNNPKGIAHTIEYLKKHNVALV VMESTGGLEIPAAKAIHRSGIAVIIANPRQTHQFAQSQSLTKTDAKDAKMLAFFAQMTAQ KEGWQTMLYQPPTEAEEVLEALVNRRNQLV Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:14:36 2011 Seq name: gi|257257222|gb|ACDX02000019.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont18.1, whole genome shotgun sequence Length of sequence - 44907 bp Number of predicted genes - 40, with homology - 40 Number of transcription units - 24, operones - 11 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 157 - 627 -128 ## NMO_0313 hypothetical protein + Prom 711 - 770 4.0 2 2 Op 1 . + CDS 945 - 1757 165 ## gi|288576245|ref|ZP_05978453.2| conserved hypothetical protein 3 2 Op 2 . + CDS 1768 - 4983 4823 ## COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) + Term 5012 - 5060 14.1 + Prom 5026 - 5085 6.5 4 3 Op 1 . + CDS 5236 - 6795 2205 ## COG1253 Hemolysins and related proteins containing CBS domains + Prom 6879 - 6938 3.9 5 3 Op 2 . + CDS 7023 - 8060 647 ## COG2801 Transposase and inactivated derivatives + Term 8166 - 8229 23.0 - Term 8003 - 8043 7.3 6 4 Tu 1 . - CDS 8124 - 8357 71 ## gi|308390113|gb|ADO32433.1| hypothetical protein NMBB_2312 + Prom 8073 - 8132 7.3 7 5 Op 1 . + CDS 8287 - 9063 519 ## gi|261365575|ref|ZP_05978458.1| conserved hypothetical protein 8 5 Op 2 . + CDS 9182 - 9376 60 ## COG2879 Uncharacterized small protein + Term 9390 - 9443 12.8 - Term 9386 - 9423 8.0 9 6 Tu 1 . - CDS 9457 - 10356 1449 ## PROTEIN SUPPORTED gi|241760258|ref|ZP_04758353.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific - Prom 10429 - 10488 6.0 - Term 10433 - 10478 12.2 10 7 Tu 1 . - CDS 10495 - 10893 635 ## COG2010 Cytochrome c, mono- and diheme variants - Prom 10938 - 10997 4.6 - Term 10946 - 10999 12.2 11 8 Tu 1 . - CDS 11032 - 12042 1193 ## COG0276 Protoheme ferro-lyase (ferrochelatase) - Prom 12073 - 12132 5.5 12 9 Tu 1 . - CDS 12220 - 13335 1537 ## COG0343 Queuine/archaeosine tRNA-ribosyltransferase + TRNA 13592 - 13668 93.2 # Val GAC 0 0 + Prom 13594 - 13653 80.2 13 10 Op 1 16/0.000 + CDS 13722 - 15635 1935 ## COG0441 Threonyl-tRNA synthetase 14 10 Op 2 36/0.000 + CDS 15701 - 16174 563 ## PROTEIN SUPPORTED gi|167856598|ref|ZP_02479300.1| 50S ribosomal protein L35 + Term 16190 - 16229 5.2 15 10 Op 3 46/0.000 + CDS 16240 - 16518 454 ## PROTEIN SUPPORTED gi|194098022|ref|YP_002001070.1| putative 50S ribosomal protein L35 16 10 Op 4 13/0.000 + CDS 16531 - 16890 590 ## PROTEIN SUPPORTED gi|59800746|ref|YP_207458.1| 50S ribosomal protein L20 + Term 16904 - 16941 5.7 + Prom 16953 - 17012 5.2 17 11 Op 1 . + CDS 17137 - 18129 1268 ## COG0016 Phenylalanyl-tRNA synthetase alpha subunit 18 11 Op 2 . + CDS 18211 - 19179 502 ## COG2958 Uncharacterized protein conserved in bacteria + Prom 19227 - 19286 2.0 19 12 Op 1 13/0.000 + CDS 19321 - 21684 2372 ## COG0072 Phenylalanyl-tRNA synthetase beta subunit 20 12 Op 2 . + CDS 21758 - 22060 269 ## PROTEIN SUPPORTED gi|148826992|ref|YP_001291745.1| 50S ribosomal protein L35 21 12 Op 3 . + CDS 22044 - 22361 351 ## NLA_15040 hypothetical protein + Term 22367 - 22428 15.5 + Prom 22562 - 22621 6.6 22 13 Tu 1 . + CDS 22707 - 23444 425 ## COG2849 Uncharacterized protein conserved in bacteria + Term 23472 - 23507 4.0 + Prom 23493 - 23552 8.2 23 14 Op 1 . + CDS 23593 - 23868 471 ## PROTEIN SUPPORTED gi|15676835|ref|NP_273980.1| 50S ribosomal protein L31 type B 24 14 Op 2 . + CDS 23868 - 23993 211 ## PROTEIN SUPPORTED gi|225075655|ref|ZP_03718854.1| hypothetical protein NEIFLAOT_00671 + Term 24013 - 24047 3.5 + Prom 24021 - 24080 4.5 25 15 Tu 1 . + CDS 24215 - 24679 478 ## NGO1063 hypothetical protein + Term 24700 - 24741 8.0 + Prom 24791 - 24850 3.2 26 16 Tu 1 . + CDS 24873 - 26627 2730 ## COG0155 Sulfite reductase, beta subunit (hemoprotein) + Term 26659 - 26695 8.2 - Term 27240 - 27277 8.0 27 17 Tu 1 . - CDS 27296 - 28810 2366 ## COG4262 Predicted spermidine synthase with an N-terminal membrane domain - Prom 28969 - 29028 3.1 + Prom 28933 - 28992 3.8 28 18 Tu 1 . + CDS 29025 - 30569 2017 ## COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase + Term 30596 - 30657 10.2 + Prom 30640 - 30699 5.5 29 19 Op 1 . + CDS 30944 - 31594 700 ## gi|261365598|ref|ZP_05978481.1| hypothetical protein NEIMUCOT_06103 + Term 31616 - 31666 9.3 + Prom 31666 - 31725 3.0 30 19 Op 2 . + CDS 31783 - 34008 3487 ## COG2838 Monomeric isocitrate dehydrogenase + Term 34039 - 34090 15.1 + Prom 34043 - 34102 3.4 31 20 Op 1 . + CDS 34349 - 35689 1104 ## NLA_6400 integral membrane protein 32 20 Op 2 . + CDS 35762 - 37099 1838 ## NLA_6410 integral membrane protein + Term 37109 - 37158 11.2 - Term 37196 - 37235 -1.0 33 21 Tu 1 . - CDS 37346 - 38605 1038 ## COG0665 Glycine/D-amino acid oxidases (deaminating) - Prom 38629 - 38688 6.5 + Prom 38606 - 38665 6.4 34 22 Tu 1 . + CDS 38742 - 39206 503 ## COG1522 Transcriptional regulators - Term 39551 - 39610 21.5 35 23 Op 1 17/0.000 - CDS 39622 - 40053 855 ## COG0781 Transcription termination factor - Term 40083 - 40134 11.4 36 23 Op 2 2/0.429 - CDS 40199 - 40678 974 ## COG0054 Riboflavin synthase beta-chain 37 23 Op 3 . - CDS 40755 - 41078 607 ## COG4859 Uncharacterized protein conserved in bacteria - Prom 41105 - 41164 3.5 + Prom 41131 - 41190 4.6 38 24 Op 1 18/0.000 + CDS 41351 - 42070 854 ## COG0571 dsRNA-specific ribonuclease + Prom 42143 - 42202 1.9 39 24 Op 2 . + CDS 42259 - 43185 1277 ## COG1159 GTPase 40 24 Op 3 . + CDS 43232 - 44149 511 ## COG2334 Putative homoserine kinase type II (protein kinase fold) + Term 44173 - 44220 15.2 + 5S_RRNA 44679 - 44735 91.0 # AE015927 [R:2797299..2798807] # 5S ribosomal RNA # Clostridium tetani E88 # Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium. Predicted protein(s) >gi|257257222|gb|ACDX02000019.1| GENE 1 157 - 627 -128 156 aa, chain + ## HITS:1 COG:no KEGG:NMO_0313 NR:ns ## KEGG: NMO_0313 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 8 156 2 149 149 108 49.0 6e-23 MPLLGECPLPSPPPQGRKRVAADFAVASDLKGNLGLQPLIAGRLKSKKQPAQPLFLAKPF IPTASPSSLPWERVRERAASRKACIWALECWERLPKIEECPLPSPPPRGRERIAADSGVA GRLKKNTRNINGRNFSGSLYRKADGANAASVFSDNL >gi|257257222|gb|ACDX02000019.1| GENE 2 945 - 1757 165 270 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|288576245|ref|ZP_05978453.2| ## NR: gi|288576245|ref|ZP_05978453.2| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 270 1 270 270 402 100.0 1e-110 MKNHGSPNNLIPMGMVLLTFIICAFVIIFIIAITNWGWIKEAYAWIINNNESIIKLVSLI LFPISFFLYSLATKKYMINNTTEEMLNFFSIPYTLQEDSFIIKTNINYWLECIEKITVLV AIVSIYLTIIRFFSVNTPVDAVVSIVSILIMPISIVFLYMHYSMKILTSLIFRKYTPVKF KKEIRAIPSSTKEKLKEKLSKEKLKEILPVLFYILLVSFVSTVMIFYFPIIIGVQMAPTK QEPLEYCQIKNLPPQTQNHCKEKSNLLKIK >gi|257257222|gb|ACDX02000019.1| GENE 3 1768 - 4983 4823 1071 aa, chain + ## HITS:1 COG:NMA0602 KEGG:ns NR:ns ## COG: NMA0602 COG0458 # Protein_GI_number: 15793592 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase large subunit (split gene in MJ) # Organism: Neisseria meningitidis Z2491 # 1 1070 1 1070 1071 2097 96.0 0 MPKRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEM ADVTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATE DAIDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVGFPTLIRPSFTMGGSGGG IAYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKADNCIIICSIENFDPM GVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEM NPRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGRTPASFEPSIDYVVTKIP RFAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRSSDKAEIR RELANPGPERMLFVADAFRAGFTLEEIHEICAIDPWFLAQIEDLVKEEQQVSAGCLQDLD FAALRRLKRKGFSDKRIAQLLGVKEKEVREHRYALKLHPVYKRVDTCAAEFATETAYLYS TYEEECEARPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCNPETV STDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLANALVENGVNIIGTSA DSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIGYPLVVRPSYVLGGRAMQ VVHSAEELQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSDGKDVVIGGIMQHVEQAG IHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNVQFAVQDGVVFVLEVNPRA SRTVPFVSKATGVPLAKVGARCMAGISLQEQGVEKEVVPDFYAVKEAVFPFIKFPGVDTI LGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFLAVRDEDKPLIVKTAQNFQA LGYGVCATRGTAEYLKEHGIIVQAVNKVQEGRPHIVDAIKNGEIALVVNTVSSSAQSISD SHSIRRTSLTQRVPQYTTIAGGEAMSEGAKSRDHLGVYSVQELHGRLKNRG >gi|257257222|gb|ACDX02000019.1| GENE 4 5236 - 6795 2205 519 aa, chain + ## HITS:1 COG:NMB1485_2 KEGG:ns NR:ns ## COG: NMB1485_2 COG1253 # Protein_GI_number: 15677338 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Neisseria meningitidis MC58 # 243 518 1 276 276 467 90.0 1e-131 MDFSWLAEPHTWIGFATLLVLEVVLGIDNLVFVAILANKVKPAQRDRARITGLGLAVVIR IIMLGFMAHIMTLTRPLFHISGLDVSGKDMIMLAGGIFLLYKATTELHERLEGHNQFAVA DSQKKHAPFWGVVAQILILDAVFSIDSVITAVAMVDHIVVAMGAVAVAMTVMISASKPLT EFVDRHPTVVMLCLGFLLMIGFSLIAEAFHFHIPKGYLYAAIGFSILIEVFNQVSQRNSR KNDYISSSWRKRTAENVLGMMGIRESVLAKAGDEAEDDGHFEENEKSMIRSVLTLAERPI LGVMIPRRDIERLDISQSREEQHAQLQNTPYSRLLVVGKAGVDEPLGYINKKDLLAQLLE TGELNIQAVLRQPLVLPDSTTALGAIELFRQSSADYALVVDEFGAVLGMVTMKDLLETIA GEFPEEFERQEEPAVQENADESLTVDGSFEYVDLAPQLNLPPQEEDADFHTVAGLIMEEL QSIPDVGDFADFHGWRFQVVEKDGQRIERVQITKLPDEG >gi|257257222|gb|ACDX02000019.1| GENE 5 7023 - 8060 647 345 aa, chain + ## HITS:1 COG:RSc1436 KEGG:ns NR:ns ## COG: RSc1436 COG2801 # Protein_GI_number: 17546155 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Ralstonia solanacearum # 76 340 1 274 278 211 48.0 2e-54 MDTRLSRRRHRRTRTSPIQNHDRPPQKPLHRRQTRPRKNTGRAYRRVVLYARKGCLPKGV KSPQPKADRKGQSQTVQTLRAQHPLKYLLHIANLPKSSFYYHHQDRPDPDEADKALLVET YQRHKGRYGQRRIAAALDWNRKKVARLMKQMELKALIRAKKAYRHPAMGEISEHLLKRRF TAKKPNEKWLTDVTELKGKDGKLYLSPILDLFNREIIAYAMSRRADSEMVKEMLEKAAPR LTDKGTMLHSDQGVLYRTAEYRKLIAKHSMVQSMSRKANCWDNAPMESFFAVLKTECFYR AGELTVDELMKQIDDYMDYYNRERCSLKLKKLSPVAYRTQLTQSA >gi|257257222|gb|ACDX02000019.1| GENE 6 8124 - 8357 71 77 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|308390113|gb|ADO32433.1| ## NR: gi|308390113|gb|ADO32433.1| hypothetical protein NMBB_2312 [Neisseria meningitidis alpha710] # 42 76 1 35 81 72 82.0 1e-11 MAGHSKAAKNFTLISFLIKIITCIDIIPNIFSLQTHLHANCLRPLQNSPKSPKFPPRHLG DFGEFCKGLSPFFFKQH >gi|257257222|gb|ACDX02000019.1| GENE 7 8287 - 9063 519 258 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261365575|ref|ZP_05978458.1| ## NR: gi|261365575|ref|ZP_05978458.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 258 1 258 258 533 100.0 1e-150 MQVIIFIKNEMSVKFLAALLWPAMLLPILSHADSGIQMVSVSQAYADDATGCEQLYPVNS FESLFRQMAGTQRSACLLNMPPEDLAQKWQIPVYRRYLRLSGRLRPDGEKQAVLRWKDKA EQQKWLKHRQRKIKQPTDGFTVVHQTDYDGSTFLEIEATPVYIKRYRSLFPDDRYPDDLP KPYVSSHILSPVSVCFNNGTEQVFPRYTVVNQVAVDEDNRLIGSDRHLIIREEKGAGILF QHPTDKCINDISSIFLIR >gi|257257222|gb|ACDX02000019.1| GENE 8 9182 - 9376 60 64 aa, chain + ## HITS:1 COG:NMA1699 KEGG:ns NR:ns ## COG: NMA1699 COG2879 # Protein_GI_number: 15794592 # Func_class: S Function unknown # Function: Uncharacterized small protein # Organism: Neisseria meningitidis Z2491 # 1 64 1 64 64 110 89.0 4e-25 MKRKLSAWWKTAKLTANLMAGVPDYENYVAQQCKHNPNALVMTELQFQDYCRKRRCGANG GRCC >gi|257257222|gb|ACDX02000019.1| GENE 9 9457 - 10356 1449 299 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|241760258|ref|ZP_04758353.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Neisseria flavescens SK114] # 1 298 1 298 299 562 91 1e-159 MFTQAAQELTTVRDILRFAVSRFNDAGLFFGHGSDNAHDEAAYLILHTLNLPLDTLEPYL DAKLLQSEKEEVLAVLERRAVEHIPAAYLTHQAWQGDFDFYVDERVIVPRSFIYELLGDS LTPWIEHPELVHRALDLCTGSGCLAVQMAHHYPAAEIDAVDLSLDALEVAAINVEDYGLE ERINLIHTDLFEGLEGAYDLIVSNPPYVDAESVDMLPDEYLHEPELALGSGEDGLDATRQ ILLHAAKYLNPKGVLLVEIGHNRDVLEAAYPELPFTWLETSGGDGFVFLLTREQLLGEY >gi|257257222|gb|ACDX02000019.1| GENE 10 10495 - 10893 635 132 aa, chain - ## HITS:1 COG:NMB0717 KEGG:ns NR:ns ## COG: NMB0717 COG2010 # Protein_GI_number: 15676615 # Func_class: C Energy production and conversion # Function: Cytochrome c, mono- and diheme variants # Organism: Neisseria meningitidis MC58 # 1 132 6 137 138 190 72.0 5e-49 MKTIHILTLAALSCFSASTFAADAAQMAQGQKIYETNCAACHGKKGEGRGAMFPPLFRSD YIMKKPQVLLNSMLKGINGPIKVNGKPYNGFMPATAINEADVAAVSTYIMNAFDNGGGTI TEKDVKAAKGKK >gi|257257222|gb|ACDX02000019.1| GENE 11 11032 - 12042 1193 336 aa, chain - ## HITS:1 COG:NMA0927 KEGG:ns NR:ns ## COG: NMA0927 COG0276 # Protein_GI_number: 15793886 # Func_class: H Coenzyme transport and metabolism # Function: Protoheme ferro-lyase (ferrochelatase) # Organism: Neisseria meningitidis Z2491 # 1 335 1 335 336 541 77.0 1e-154 MPRFLPEPPLPYTDQTRTAVLLLNLGTPDAPTAQAVKPYLSDFLSDQRVVELPKLLWQPI LRGLILTLRPKKSAHAYEKIWLKEGSPLLVYTARQAEALGKLLPDITVRYAMTYGNPGVD DVLAELKSQGIGNLLVVPLYPQYAASSTGAALDKVFLQLLRQRNQLSIRTVSRFYDDAGY IEAMKKQIQAYWAEHGRGEKLMLSFHGIPQKQYDEGDPYPDECRHTAKLLAEALKLTEQE YIVSFQSQFGKAKWVKPSTQVLFDELPKQGITKLDVFCPGFMADCLETMEEIALMGREQF HAAGGKEYRYIPCLNDGAEWIAALADLVRRNLRGWV >gi|257257222|gb|ACDX02000019.1| GENE 12 12220 - 13335 1537 371 aa, chain - ## HITS:1 COG:NMA0928 KEGG:ns NR:ns ## COG: NMA0928 COG0343 # Protein_GI_number: 15793887 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Queuine/archaeosine tRNA-ribosyltransferase # Organism: Neisseria meningitidis Z2491 # 1 371 1 371 371 764 95.0 0 MLKFTLHKKDGHARRGTLELNHGKIETPVFMPVGTYGSVKAMNPQNLHDIKAQIILGNTY HLWLRPGLEVIEQFGGLHEFIGWNKPILTDSGGFQVFSLSDMRKLTEEGCTFQSPINGDR LFLSPEISMKIQTVLNSDIVMQLDECTPGEATHEQAQKSLQMSLRWAERSKKAFEDLKNP NALFGIVQGAMYEDLREESLRGLEQFDFPGLAIGGLSVGEPKPEMYRMLRAVGPMLPEHK PHYLMGVGTPEDLVYGVAHGVDMFDCVMPTRNARNGWLFTRFGDLKIKNAKHKLDKRPID ESCTCYSCQNFSRAYLHHLHRAGEILGAQLNTIHNLHFYQVIMAEMREAIEQGKFADWQA QFHENRARGVD >gi|257257222|gb|ACDX02000019.1| GENE 13 13722 - 15635 1935 637 aa, chain + ## HITS:1 COG:NMB0720 KEGG:ns NR:ns ## COG: NMB0720 COG0441 # Protein_GI_number: 15676618 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Threonyl-tRNA synthetase # Organism: Neisseria meningitidis MC58 # 1 637 1 637 637 1302 97.0 0 MLNITLPDGSVRQYESPVTVAQIAASIGAGLAKATVAGKVNGKLVDACDPITEDSAVQII TPKDQEGVEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAI EARMKELIAQDYDVIKIMTPRAETIKIFQDRGEEYKLRLIDDMPEVEAMGMYHHQEYVDM CRGPHVPNTRFLKNFKLTKLAGAYWRGDSNNEMLQRIYGTAWATKEELKAYIQRIEEAEK RDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDK TFWEKSGHWDNYKDNMFVTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSC HRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHDVSVKLS LRPEKRAGSDDVWDKAEQGLRDALTACGVEWDELPGEGAFYGPKIEYHVKDALGRSWQCG TLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFIGILIENHAGSFPLWLAPVQ MVIMNITENQADYCCEVAAKLQAAGFRVELDLRNEKIGYKIRDNSQYRFPYQIVVGDKEK QENKVAVRRKAEDLGSLDLDDFIARLQQEIADALVNH >gi|257257222|gb|ACDX02000019.1| GENE 14 15701 - 16174 563 157 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167856598|ref|ZP_02479300.1| 50S ribosomal protein L35 [Haemophilus parasuis 29755] # 1 157 2 159 159 221 65 6e-57 KEVRLISESGEQLGVVSVREALAMAEEQDVDLVEISPTAKPPVCKLMDYGKYKYQQAKKR DEAKKNQKQVQIKEIKFRPGTDEGDYQIKMRNINRFLADGDKVKVTLRFRGREMAHQQLG AQLLERVKEDLAEVAQIESFPKMEGRQMVMMIAPKKK >gi|257257222|gb|ACDX02000019.1| GENE 15 16240 - 16518 454 92 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|194098022|ref|YP_002001070.1| putative 50S ribosomal protein L35 [Neisseria gonorrhoeae NCCP11945] # 1 92 1 92 92 179 94 3e-44 MAFWVQVFETNVLKPPDALSNNEWSFPMPKMKTKSSAKKRFKVLGNGGVKRAHAFKRHIL TKKTTKNKRQLRGTSMVNDRDLASVAKMLPYA >gi|257257222|gb|ACDX02000019.1| GENE 16 16531 - 16890 590 119 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|59800746|ref|YP_207458.1| 50S ribosomal protein L20 [Neisseria gonorrhoeae FA 1090] # 1 119 1 119 119 231 100 4e-60 MPRVKRGVTARARHQKIFALAKGYRGRRKNVYRVAKQAVMKAGQYAYRDRRQRKRQFRQL WIVRINAGARENGLSYSKFMNGLKRASIEIDRKVLADLAVFDKAAFAQLVEKAKAALAA >gi|257257222|gb|ACDX02000019.1| GENE 17 17137 - 18129 1268 330 aa, chain + ## HITS:1 COG:NMA0933 KEGG:ns NR:ns ## COG: NMA0933 COG0016 # Protein_GI_number: 15793892 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase alpha subunit # Organism: Neisseria meningitidis Z2491 # 1 330 1 330 330 662 97.0 0 MENVNRIVAEGIAAVEAAQDFNALEQIKARYLGKTGELTGLLKTLGQMSPEERKTIGAHI NECKNQFQTAFNNKRDALNEAKLQAQLAAEALDITLPGRAQENGGLHPVTLTLQRVVELF HGMGFEVADGPEIEDDFHNFQALNIPANHPARAMQDTFYVENGDVLRTHTSPIQIRYMLD KKEPPIRIIAPGRVYRVDSDATHSPMFHQAEGLWVEEGVTFADLKAVFTDFIRRFFERDD LQVRFRPSFFPFTEPSAEIDIMGENGKWLEVGGCGMVHPNVLKNVNIDPEKYTGFAFGIG LDRFAMLRYNVNDLRLFFDNDLNFLKQFAK >gi|257257222|gb|ACDX02000019.1| GENE 18 18211 - 19179 502 322 aa, chain + ## HITS:1 COG:jhp0788 KEGG:ns NR:ns ## COG: jhp0788 COG2958 # Protein_GI_number: 15611855 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Helicobacter pylori J99 # 9 309 6 311 313 216 42.0 5e-56 MDDEKLGFVELAVLAMEMVNRPITPTELWEFVLQNKLHFQLKTFDEKTQTFSGKTPSATF NARIRTDKEHFVEIPNTKPKQYILKHQFNHASKQPVSRTHTKKSTFHERYLHPVLAHFLK HSDYFQAYPKTIFHEESSKGQKGEDKWLYPDMVAVNFEYANYQKNNVLPFIKKFDISPIK IFSFELKKELNTSNYKEYFFQAVSNSSWANEGYLVALHIKQDSQFIEALQKLSQSFGIGI IHLNIDNIEKSAILSPARFKEKMDYSVVYELADKNPNFAQFLKTVTDFEPQYPARFSSEF DEILTVDKLPKYLDTMLQATLK >gi|257257222|gb|ACDX02000019.1| GENE 19 19321 - 21684 2372 787 aa, chain + ## HITS:1 COG:NMB0728_2 KEGG:ns NR:ns ## COG: NMB0728_2 COG0072 # Protein_GI_number: 15676626 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase beta subunit # Organism: Neisseria meningitidis MC58 # 147 787 2 642 642 1212 93.0 0 MQFSYSWLKIQADTELSADKLEHLLTMSGLEVEEAETAAPAFTGVVIAEVKSVEKHPDAD RLNVTQVDAGTGELVQIVCGAPNVKAGIKVPCSLPGAVLPGNFKIKPTKMRGVVSNGMLC STDELGLPDDGVNGLHILPQDAPVGANIREYLDLDDTVFTLKITPNRADCLSIKGIAREV SALTGCAFKQPAIHPASITGSRKQPVQIDAPADCGRFISRVIENVNARAATPDWMKQRLD RSGIRSISALVDIGNYVMLEIGQPMHVFDADKLSGSLHIRRAREGETLECLNEKIVSLSE NTLVVADEKGALSLAGLMGGAASAVSDDTQNIVLEAAWFAPEIIAGKSRQYGFGSDSSFR FERGVDYRLQADAIERATELVLQICGGAAGEMVEALGELPEAKQVELRLGRLKTVLGVDI PTEQVETILQHLGLQPEKTAEGFRVTGPSFRFDIEIEADLIEEIGRVYGYENIPDDYTSG RLKMLALPETRRPRFAVYNEMAARGYREVVSYAFVDEQWELDFAANANPIRLQNPLAAQY AVMRSTLIGGLVEILQNNLNRKQNRVRVFEIARVFSKGSDGRFVQNERIGGLWYGAAMPE QWGEKTRNADFYDIKADVENLLKNKAVEFVKTEHPALHPGRATNIVSDGQIIGFVGELHP KWLQKYDLPQAPLVFEIDMAAVLEREKTRYQAVSKFQPVRRDLAFVMPEAMTHDDLLVAL KGAANKLVQEISVFDVYRGTGLPEGMKSMAVKVILQDMENTLTDETVEPVIGKLIDAATA AGAQLRS >gi|257257222|gb|ACDX02000019.1| GENE 20 21758 - 22060 269 100 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148826992|ref|YP_001291745.1| 50S ribosomal protein L35 [Haemophilus influenzae PittGG] # 2 93 3 93 96 108 56 7e-23 MTLTKAELADILVDKVSNVTKNDAKEIVELFFEEIRSTLARGEEIKISGFGNFQLRDKPQ RPGRNPKTGEEVPITARRVVTFHASQKLKGMVEHYYDKQR >gi|257257222|gb|ACDX02000019.1| GENE 21 22044 - 22361 351 105 aa, chain + ## HITS:1 COG:no KEGG:NLA_15040 NR:ns ## KEGG: NLA_15040 # Name: not_defined # Def: hypothetical protein # Organism: N.lactamica # Pathway: not_defined # 1 105 1 102 102 130 58.0 2e-29 MTNNANPVIPAKRYFSLDEMCELVQISPSQFAQWQHENGIVVGYGGDRYTRSDVVKLLKL KDTFAPYVDRFSRDSLDANGNPAAKAEEVKAGLNSILADLQKALA >gi|257257222|gb|ACDX02000019.1| GENE 22 22707 - 23444 425 245 aa, chain + ## HITS:1 COG:NMB1654 KEGG:ns NR:ns ## COG: NMB1654 COG2849 # Protein_GI_number: 15677503 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 11 245 10 244 245 329 69.0 2e-90 MIQYWQKSLAAVLLLGVFSQTWAQSHSVYFNQHGKITATMSSVAYVRQYTVQSGIAKAQD FYYPSMKKYSDPYEVPAGQIKVFVPVLDNGTLTLWHFNGQKKMVGTYKNSKPNGEWTNWY PNGKRSAVMPYQNGLSEGIGSRYYRNGVKESEIQFKHDKANGYWKQWYPDGSPKMEMNMV NDKPTEILSWDENGRILSEISISNGRRNGIVLEWYEDGAKKSESVYSNDQLVKKTHWDKE GYVVE >gi|257257222|gb|ACDX02000019.1| GENE 23 23593 - 23868 471 91 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15676835|ref|NP_273980.1| 50S ribosomal protein L31 type B [Neisseria meningitidis MC58] # 1 91 1 91 91 186 94 3e-46 MKPNIHPDNYRTVLFFDSGANEGWLIRSCAETHGKTMVWKDGKEYPLFALDTSSASHPVY TGRQRNVNTEGRASKFNQRFQSMMSSFRKDK >gi|257257222|gb|ACDX02000019.1| GENE 24 23868 - 23993 211 41 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225075655|ref|ZP_03718854.1| hypothetical protein NEIFLAOT_00671 [Neisseria flavescens NRL30031/H210] # 1 41 1 41 41 85 100 4e-16 MQVLSSLKTAKKRHRDCQIVRRKGKVYVICKSNPRFKARQR >gi|257257222|gb|ACDX02000019.1| GENE 25 24215 - 24679 478 154 aa, chain + ## HITS:1 COG:no KEGG:NGO1063 NR:ns ## KEGG: NGO1063 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae # Pathway: not_defined # 72 154 44 126 126 115 67.0 6e-25 MKSKVLLAVAAALSLGACVAPDMDYDFERGSRHEHRHEHRYDNRDNNYDRNEMRREERRY EENRRTSESRRLRTFSCENGLSVDVRNLNNDQLELRLDDKRAVLSSDVSGSGSRYTSNRG LFGKGAEWHEKNGEASFSFTDPYGNRVETSCSVR >gi|257257222|gb|ACDX02000019.1| GENE 26 24873 - 26627 2730 584 aa, chain + ## HITS:1 COG:ECs3618 KEGG:ns NR:ns ## COG: ECs3618 COG0155 # Protein_GI_number: 15832872 # Func_class: P Inorganic ion transport and metabolism # Function: Sulfite reductase, beta subunit (hemoprotein) # Organism: Escherichia coli O157:H7 # 16 583 15 569 570 852 70.0 0 MTTTADPRAKLPDTPLSGNEALKDRSDYLHGTIKDDLTDDFTGGFTTDNFQLIRFHGMYE QDNRDIRAERTDQKLEPLKNMMLRCRLPGGIITPAQWLGIDEFAGDHTIYGSIRLTNRQT FQYHGILKTDLKLAHQSLHKLGLDSIATASDVNRNVLCTSNPVQSPLHQEAYEWAKRISM HLLPRTMAYADVWLDGEKVFTTEPTEPRNKEIADDVEPILGKTYLPRKFKTAVVIPPDND VDIHSNDLGFVAIEENGKLVGFNVLVGGGLSSEHGNTKTYPNISYEFGFVPLEYTLNAAE AVVSTQRDWGNRSDRKAARTRYTLQRVGVEVFKEEVERRMGIKFEPIRPYAFTHRGDHIG WVKGLEGNWHLTLFIENGRLLDYPGRPLKTGVREIAKIHPGDFRLTANQNLVVANVPPEL KDTIDKIAKEHGLISKSITIQRENSMACVALPTCPLAMAEAERFLPSFSDKIDEMFAKYG LEDEYIVLRVTGCPNGCGRAMLAEIGLVGKAVGRYNLYAGGNREGTRIPRLFKENITEPE ILEIVDGWVGNWAQNRLDDEGFGDFAIRTGIVKPVLDAPRDFWV >gi|257257222|gb|ACDX02000019.1| GENE 27 27296 - 28810 2366 504 aa, chain - ## HITS:1 COG:RSp1337 KEGG:ns NR:ns ## COG: RSp1337 COG4262 # Protein_GI_number: 17549556 # Func_class: R General function prediction only # Function: Predicted spermidine synthase with an N-terminal membrane domain # Organism: Ralstonia solanacearum # 3 504 4 510 510 602 61.0 1e-172 MTANRTLIISVFIVASCGLAYELIIAALASYLLGDSILQFSSVIGLYLFSMGIGAHLTRY IKDEDVLHRFIEIELLVGIIGGISALALFVAFGLSAAPFRTLLYAFVLIVGAVVGMEIPL VMRVLNRKGAEFKELVSKVLTFDYLGALAVSLLFPLLLAPKLGMARSALLFGILNAAVAY LTARVFKAELPRYRAIRLRALIVLSVLAAAFAYADRISFKAEQSYFGDPVVYQSHSPYQR LVVTRWKDDTRLYINGNLQFSSRDEARYHEALVLPAMQMVSDASRILILGGGDGLAAREV LKYPQVKHVTLVDLDPDMTATFKTSAALSALNQGSLSHPKMHIVNDDAAKWLEGSSEKFD VIIIDLPDPSNFSLGKLYSVPMYRLVARHLQPQGKIVVQSTSPYFAPNAYWSVVATLEAA GLSTAPYHVYVPSFGEWGFVLAGFDKQFPVPQKFDVPTRYLNAQTAAEMFRFPPDMARRK VEPNYLNNQILVSYFESDWHNVTR >gi|257257222|gb|ACDX02000019.1| GENE 28 29025 - 30569 2017 514 aa, chain + ## HITS:1 COG:NMA0892 KEGG:ns NR:ns ## COG: NMA0892 COG0034 # Protein_GI_number: 15793861 # Func_class: F Nucleotide transport and metabolism # Function: Glutamine phosphoribosylpyrophosphate amidotransferase # Organism: Neisseria meningitidis Z2491 # 1 514 1 514 514 968 95.0 0 MCGVLGLVSHEPVNQLLYDGLQMLQHRGQDAAGIVTAEGSTFHMHKGKGMVREVFRTRNM RDLVGNAGIAHVRYPTAGNAGSSAEAQPFYVSSPFGIVLAHNGNLTNTAELYENVCNKHL RHVNTSSDSEVLLNVFAHELRREVSRNAEPYRLNIDNIFNAVAEVHRLVRGAYGVVAMIA GYGMVAFRDPYGIRPLVLGSQTDESGRKSYAVASESVAFNALAYDLERDIQPGEAVFVGF DGTMIARCCTDRAKLSPCLFEYVYFARPDSVIDGVSVYQSRMDMGVSLAEKIKRELPVDD IDVVMPIPDTSRPSAMELAVHLKKPYREGLIKNRYIGRTFIMPGQATRKKSVRQKLSPME TEFEGKSVLLVDDSIVRGTTSREIVEMVREAGARKVYIASAAPEVRYPNVYGIDMPTREE LIANGRSAAEIAAEIGADGIVFQNLSDLETVVKALNPKIESFDSSCFNGIYQTGDIDQAY LDRLSAEKSGCGGLKVHPSRMEHSISISDTGDEE >gi|257257222|gb|ACDX02000019.1| GENE 29 30944 - 31594 700 216 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261365598|ref|ZP_05978481.1| ## NR: gi|261365598|ref|ZP_05978481.1| hypothetical protein NEIMUCOT_06103 [Neisseria mucosa ATCC 25996] hypothetical protein NEIMUCOT_06103 [Neisseria mucosa ATCC 25996] # 1 216 1 216 216 311 100.0 2e-83 MNTLTKFGLALFTAAALAACGDSGKSAESKPTTVQTAEGEVTLSGKYAEIINKFPVPDPK LAEPITISDKKSPTGLEDLKKFMEYISGAEAQKIAQMASKLQQTALKGDEAAALAAVKEL TPALDKYLQNAEKLNIQDAEVKAVLDRMLQTSKTANEMIILSSENASALKIDMKDKEAVQ FMKAYQDKTHNMETVLRQANQEVQKAAEALGKKYAQ >gi|257257222|gb|ACDX02000019.1| GENE 30 31783 - 34008 3487 741 aa, chain + ## HITS:1 COG:NMB0920 KEGG:ns NR:ns ## COG: NMB0920 COG2838 # Protein_GI_number: 15676815 # Func_class: C Energy production and conversion # Function: Monomeric isocitrate dehydrogenase # Organism: Neisseria meningitidis MC58 # 1 741 1 741 741 1361 96.0 0 MTSKATIIYTHTDEAPALATQSLLPIVQAFTRHAGIEVKTSDISLSGRILAAFPEHLTEA QRVPDALAELGELVKQPDANVIKLPNISASVPQLTAAIKELQAKGFAVPDYPADPQTDEE KAVRERYDRIKGSAVNPVLREGNSDRRAPKAVKNFAKKNPHSMGAWTKDSKTHVATMQSG DFFHNEQSVTVPDATSVSIVFTDKQGNKKELREPVALKAGEIIDATVMSKKALLAFLAEQ VKDAKAKGVLFSLHMKATMMKVSDPIIFGHAVKVFFAPVFEKFGDKLAAAGVNVNNGFGN LLANLDKLDADTRAAVEAEIAAVYAANPDLAMVDSDKGITNLHVPSDVIVDASMPAMIRN SGRMWDKDGKAQDTKAVIPDSSYAGVYQATIDFCREHGAFDPTTMGTVPNVGLMAQAAEE YGSHNKTFEIEADGQVQVIDAAGKVLMQHDVEAGDIWRMCQTKDAPVKDWVQLAVNRARL SNTPAVFWLDENRPHDKSLLAKVNAYLAELDTNGLDIRVLAPEEAAKFSLGRLKNGEDTI SVTGNVLRDYLTDLFPILELGTSAKMLSIVPLMNGGGMFETGAGGSAPKHVQQFLEENHL RWDSLGEFLALAVSFEHLAQKTGNTKAQVLADTLDAATEKLLLNDKSPKRKAGELDNRGS HFYLTLYWAQELAAQDKDAELKAAFAPLAETLTADEAKIVAELSAVQGKAADIGGYYAPD AAKAAQAMRPSETFNQALAKL >gi|257257222|gb|ACDX02000019.1| GENE 31 34349 - 35689 1104 446 aa, chain + ## HITS:1 COG:no KEGG:NLA_6400 NR:ns ## KEGG: NLA_6400 # Name: not_defined # Def: integral membrane protein # Organism: N.lactamica # Pathway: not_defined # 1 445 1 445 449 736 87.0 0 MLNPSRKLAELVRILEEGGYIFAGDPVQATEALRHVEGGVEGKIIRRAEMIDRDRRLRHT LEQVRTGSFWLWVVAATMMFSGGFSGTYLLMDSQGLNFFLILAGVLGMNTLMLAVWLATL FLRVKVGRFFSSPATWFRGKDPVNQAVFRLYADEWRQPSARWIAGATSHSLWLCTLSGML VSVLLLLLVRQYTFNWESTLLTNAASVRAVEMLAWLPSKLGFPAPDARAVVEGRLNGNIA DARAWSGLLVGSIACYGILPRLLAWAVCKIFLKTNQSKLDLERPYYQAVIRRWQNKIVDA DTRRETVSAVSPKITLNDAPKWAVMLETEWHEGTWFAGRLAQEWLDKGVAVNREEVAALE AELKQKPAQLLIGVRAETVPDRGVLRQIVRLSEAAQGGAVVQLLTERPLSDDLSETLNHW RNALAECDVAWLEPDKAAQEGRLKSQ >gi|257257222|gb|ACDX02000019.1| GENE 32 35762 - 37099 1838 445 aa, chain + ## HITS:1 COG:no KEGG:NLA_6410 NR:ns ## KEGG: NLA_6410 # Name: not_defined # Def: integral membrane protein # Organism: N.lactamica # Pathway: not_defined # 1 445 1 445 446 773 89.0 0 MNNQPLSLAVVGHTNTGKTSLLRTLLRDSGFGEVKNAPSTTRHVEEAAITDGADTLLYLY DTPGLEDAGGVLDWLETHTDARADGIERLQQFLDSHGAHHDFNQEAKVLRQLLQSDMALY VIDAREPVLDKYRDELTILSWCAKPVMPVFNFTGGQLPEAWTTMLARRNLHVFAGFDTVA FDFEGELNLWNKLATMLPQHDIIDRLTASRRREWTRLDKEARHEIAGFLLDVAAFTQEID ENDDPAPVLQTMQAEIRQLERQMQQRLFALYRFYHSEIDGGDWVPKAFHQDPFDSELLKQ YGIRTSTGAATGALIGLGLDIATLGGSLGLGTAIGGFLGGILPNTRTISDKLTGRQTLHT DPETLTLLAARALDLLHILQTRGHAAQSQVELHSRKAPWTPDKLPSELNKARSRWKWSSL NTHLPETSRAEREEYTESLSQKLGG >gi|257257222|gb|ACDX02000019.1| GENE 33 37346 - 38605 1038 419 aa, chain - ## HITS:1 COG:NMB0176 KEGG:ns NR:ns ## COG: NMB0176 COG0665 # Protein_GI_number: 15676103 # Func_class: E Amino acid transport and metabolism # Function: Glycine/D-amino acid oxidases (deaminating) # Organism: Neisseria meningitidis MC58 # 1 416 1 416 418 673 77.0 0 MKLIVLGAGIAGVSTAWYLASEGHDVTVIDRADDVAMETSFANAGQLSYGYTTPWAAPGI PLKALKWMFKQHSPLIFQPDGSLFQICWLKQMLDNCTAERYQINKERMVRISEYSREMFR LFKEQENIDFEGRNKGTLQIFRTQKEVAAAEKDIAVLERYGVPLRRLKPEECLEFEPALH HALPKIAGGLHLPADATGDCRLFTRKLRDLCIQKGVRFEFGHHIRRILHDRCRATAVETD QGQFGADAFVCALGCFSRTVLEDLGWDLPIYPVKGYSLTVPVVHDEKAPVSTVLDETYKV AITRFDKRIRVGGMAELSGYGLHLSEKRRATLALVVNDLFPGGGDLQQAEFWSGLRPMTP DSTPLIGKTPLENLFLNTGHGTLGWTMSLGSAKLTADIVCGKETEIGSDDLGLSRYTKV >gi|257257222|gb|ACDX02000019.1| GENE 34 38742 - 39206 503 154 aa, chain + ## HITS:1 COG:NMB1650 KEGG:ns NR:ns ## COG: NMB1650 COG1522 # Protein_GI_number: 15677499 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Neisseria meningitidis MC58 # 1 154 1 154 154 252 85.0 2e-67 MKELDKTDLKILKFLQQNARIPMTELAEKVGLSTTPVTERVKRLERDNFITGYHARLNPN LLGKGLLIFVELKLRSKSGNIFEDFRREVMRIPQILECHLVSGEYDYLIKVRLPDMSAYR DMLGNILLHLPAAAESRSYVVMEEVKEETVLDLD >gi|257257222|gb|ACDX02000019.1| GENE 35 39622 - 40053 855 143 aa, chain - ## HITS:1 COG:NMA0885 KEGG:ns NR:ns ## COG: NMA0885 COG0781 # Protein_GI_number: 15793854 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Neisseria meningitidis Z2491 # 1 140 1 140 141 239 87.0 1e-63 MKTPRRRARELAVQALYQAGINNTAAPEIAKNIQDQPDFAKADEELFNKLFFGTHTHAAE YIQQIRPLLDRDEKDLSPIERAVLLMACHELSAMPETPYPVIINEAIEVTKTFGGTDGHK FVNGILDKLAAQLRPNDPKRGNV >gi|257257222|gb|ACDX02000019.1| GENE 36 40199 - 40678 974 159 aa, chain - ## HITS:1 COG:NMA0886 KEGG:ns NR:ns ## COG: NMA0886 COG0054 # Protein_GI_number: 15793855 # Func_class: H Coenzyme transport and metabolism # Function: Riboflavin synthase beta-chain # Organism: Neisseria meningitidis Z2491 # 1 158 1 158 158 251 85.0 5e-67 MNIIAPNLDGAHLRIGIVQARFTNEIGSEMLKVCCRTLQELGVADNNITIATVPGALEVP LVLQNMAASEQYDALIAIGVVIRGETYHFELVSNESGSGVTRVGLDYNIPIANAILTTEN DEQAVARIEEKAADAAKVAVECANLVNRLIEEQFDDEEE >gi|257257222|gb|ACDX02000019.1| GENE 37 40755 - 41078 607 107 aa, chain - ## HITS:1 COG:NMA0887 KEGG:ns NR:ns ## COG: NMA0887 COG4859 # Protein_GI_number: 15793856 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 107 1 107 107 171 81.0 4e-43 MNKFAQALSAALDRCIVTNTVAKQGEPVGFLYREAPVFENDSGWRFFSGDETDEYTDDPD NFSVVSLSEITQFNPAIAALITQPEGSAWEIGEDGEFQAVADWQPQE >gi|257257222|gb|ACDX02000019.1| GENE 38 41351 - 42070 854 239 aa, chain + ## HITS:1 COG:NMB0686 KEGG:ns NR:ns ## COG: NMB0686 COG0571 # Protein_GI_number: 15676584 # Func_class: K Transcription # Function: dsRNA-specific ribonuclease # Organism: Neisseria meningitidis MC58 # 1 239 1 239 239 371 84.0 1e-103 MKTDVLKQQAHTAIQNKLGYHFKDTALLQQALTHRSYHAKNNERFEFVGDSILNYTVAKM LFDAFPKLTEGELSRLRASLVNEGVLAEIALEMNVGDGLYLGAGELKSGGFRRPSILADA MEAMFAAVSFDADFAEAEKVVRHLFAERVKRADFKTQGKDNKTALQEALQARRLALPKYR IEEQIGHANDSMFLISCDLGELGFICKAQGSSRKVAEQQAAKEALQWLEQHHPLKKAKK >gi|257257222|gb|ACDX02000019.1| GENE 39 42259 - 43185 1277 308 aa, chain + ## HITS:1 COG:NMA0889 KEGG:ns NR:ns ## COG: NMA0889 COG1159 # Protein_GI_number: 15793858 # Func_class: R General function prediction only # Function: GTPase # Organism: Neisseria meningitidis Z2491 # 1 308 1 307 307 480 84.0 1e-135 MDIETFLQNESNHPADYRCGFVAIVGRPNVGKSTLMNHLIGQKISITSKKAQTTRNRVTG IYTDDTAQFVFVDTPGFQTKHRNALNDRLNQNVTEALSGVDAVVFVVEAMRFTDADRIVM KQLPANTPVILVINKIDKNKAGNGGLQEFIDQISAEFKFAGHETVSAKHGLGIANLLARL RPYLPESVPMYPEEMVTDRSSRFLATEIVREKLFRYLGEELPYAMNVEIEQFEEEENGLY RIYIAVLVDKDSQKAILIGKGGEKLKKISTEARLDMEKLFDTKVFLKVWVKVKSGWADDV RFLRELGL >gi|257257222|gb|ACDX02000019.1| GENE 40 43232 - 44149 511 305 aa, chain + ## HITS:1 COG:NMB2029 KEGG:ns NR:ns ## COG: NMB2029 COG2334 # Protein_GI_number: 15678023 # Func_class: R General function prediction only # Function: Putative homoserine kinase type II (protein kinase fold) # Organism: Neisseria meningitidis MC58 # 1 304 1 304 305 488 75.0 1e-138 MSVYTNISDEQIREFLSDYDLGEFVSLQGIAQGITNSNYFLNTSKGSYVLTVFEVLRQDE LPFFLNLNQHLSGKGVACPSPIVRKDGKLDSVLAGKPACVVTRLNGADTAWATEAQCFNT GAMLAKMHLAVQDFPEKMENPRYNTWWKQAYEQLLPQLNEADAQLLGKEISDLENNLGGH LPSGIIHADLFKDNVLLDSENVAGFIDFYYACNGNFMYDLAIAVNDWSRTSDNKLDANLC KAFIDGYESIRPLSDAEKEYFPVAQRAGCVRFWVSRLLDFHFPQEGEMTFIKDPNVFRDL LLSLS Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:15:53 2011 Seq name: gi|257257220|gb|ACDX02000020.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont19.1, whole genome shotgun sequence Length of sequence - 35400 bp Number of predicted genes - 32, with homology - 32 Number of transcription units - 23, operones - 7 average op.length - 2.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 6/0.000 - CDS 1 - 463 246 ## COG3335 Transposase and inactivated derivatives 2 1 Op 2 . - CDS 499 - 849 294 ## PROTEIN SUPPORTED gi|148984739|ref|ZP_01818007.1| IS630-Spn1, transposase Orf1 - Prom 881 - 940 6.3 - Term 909 - 944 6.3 3 2 Op 1 3/0.000 - CDS 959 - 2416 1866 ## COG1160 Predicted GTPases - Prom 2606 - 2665 5.0 - Term 2645 - 2683 9.3 4 2 Op 2 12/0.000 - CDS 2713 - 3342 878 ## COG2976 Uncharacterized protein conserved in bacteria 5 2 Op 3 . - CDS 3343 - 4638 1539 ## COG0124 Histidyl-tRNA synthetase - Prom 4667 - 4726 6.5 - Term 5116 - 5158 4.6 6 3 Tu 1 . - CDS 5364 - 5696 229 ## NMO_1205 hypothetical protein - Prom 5856 - 5915 1.8 - Term 6127 - 6173 7.3 7 4 Tu 1 . - CDS 6277 - 6555 358 ## COG3039 Transposase and inactivated derivatives, IS5 family - Prom 6695 - 6754 11.1 + Prom 7386 - 7445 7.7 8 5 Tu 1 . + CDS 7562 - 8485 762 ## COG0564 Pseudouridylate synthases, 23S RNA-specific + Term 8498 - 8561 17.0 - Term 8496 - 8537 8.9 9 6 Tu 1 . - CDS 8595 - 10088 2327 ## COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes - Prom 10163 - 10222 5.2 - Term 10168 - 10219 8.1 10 7 Tu 1 1/0.400 - CDS 10235 - 11296 1635 ## COG0407 Uroporphyrinogen-III decarboxylase - Term 11326 - 11388 6.1 11 8 Op 1 11/0.000 - CDS 11416 - 12639 1728 ## COG3071 Uncharacterized enzyme of heme biosynthesis 12 8 Op 2 10/0.000 - CDS 12636 - 14168 1795 ## COG2959 Uncharacterized enzyme of heme biosynthesis 13 8 Op 3 . - CDS 14155 - 14886 432 ## COG1587 Uroporphyrinogen-III synthase - Prom 14941 - 15000 5.4 - Term 15104 - 15150 12.0 14 9 Op 1 . - CDS 15173 - 15469 383 ## NT05HA_1184 hypothetical protein 15 9 Op 2 . - CDS 15485 - 16444 1011 ## COG2214 DnaJ-class molecular chaperone - Prom 16478 - 16537 8.2 - Term 16517 - 16561 8.4 16 10 Tu 1 . - CDS 16591 - 16986 240 ## NMC1014 hypothetical protein - Prom 17037 - 17096 3.2 + Prom 17075 - 17134 3.6 17 11 Tu 1 . + CDS 17203 - 18279 1633 ## COG0598 Mg2+ and Co2+ transporters 18 12 Tu 1 . + CDS 18412 - 18894 636 ## COG1607 Acyl-CoA hydrolase + Term 18936 - 18973 1.0 + Prom 18940 - 18999 6.0 19 13 Tu 1 . + CDS 19130 - 20137 1278 ## COG3039 Transposase and inactivated derivatives, IS5 family + Prom 20149 - 20208 3.3 20 14 Tu 1 . + CDS 20355 - 20816 287 ## COG3335 Transposase and inactivated derivatives + Term 20933 - 20965 2.4 - TRNA 20889 - 20978 74.5 # Leu TAA 0 0 - TRNA 21090 - 21163 65.1 # Cys GCA 0 0 - TRNA 21191 - 21266 88.3 # Gly GCC 0 0 - TRNA 21289 - 21364 88.3 # Gly GCC 0 0 - TRNA 21391 - 21466 88.3 # Gly GCC 0 0 - TRNA 21506 - 21581 88.3 # Gly GCC 0 0 21 15 Tu 1 . - CDS 21668 - 22228 272 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase - Prom 22260 - 22319 4.6 - Term 22262 - 22325 0.7 22 16 Tu 1 . - CDS 22330 - 22875 338 ## COG4253 Uncharacterized protein conserved in bacteria - Prom 22918 - 22977 2.5 - Term 23012 - 23049 8.0 23 17 Op 1 3/0.000 - CDS 23066 - 23635 668 ## COG3198 Uncharacterized protein conserved in bacteria 24 17 Op 2 . - CDS 23639 - 25159 1742 ## COG0348 Polyferredoxin - Prom 25243 - 25302 5.4 + Prom 25401 - 25460 5.0 25 18 Tu 1 . + CDS 25668 - 27647 3086 ## COG0021 Transketolase + Term 27668 - 27717 11.4 + Prom 27938 - 27997 6.9 26 19 Op 1 . + CDS 28043 - 30055 2545 ## COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily + Term 30076 - 30113 8.0 + Prom 30131 - 30190 5.0 27 19 Op 2 . + CDS 30214 - 30993 1195 ## COG3022 Uncharacterized protein conserved in bacteria + Term 31107 - 31173 30.0 + TRNA 31073 - 31163 69.6 # Ser TGA 0 0 + Prom 31416 - 31475 5.7 28 20 Op 1 6/0.000 + CDS 31515 - 31865 299 ## PROTEIN SUPPORTED gi|148984739|ref|ZP_01818007.1| IS630-Spn1, transposase Orf1 29 20 Op 2 . + CDS 31769 - 32191 73 ## COG3335 Transposase and inactivated derivatives + Term 32197 - 32234 1.0 - Term 32448 - 32490 4.6 30 21 Tu 1 . - CDS 32502 - 33488 1006 ## COG3547 Transposase and inactivated derivatives - Prom 33718 - 33777 6.7 31 22 Tu 1 . - CDS 33871 - 34764 862 ## COG2431 Predicted membrane protein - Prom 34915 - 34974 4.6 32 23 Tu 1 . - CDS 34984 - 35304 431 ## COG3293 Transposase and inactivated derivatives Predicted protein(s) >gi|257257220|gb|ACDX02000020.1| GENE 1 1 - 463 246 154 aa, chain - ## HITS:1 COG:SP0016 KEGG:ns NR:ns ## COG: SP0016 COG3335 # Protein_GI_number: 15899965 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 42 147 1 106 112 135 58.0 2e-32 MPKVYLDETGFDTFYYRPYAYALRGQIVKARISGKRYERMSLVAARGDRELVAPMIYKGT MDSSLFEAWFGQFLLKELKEPSVIIMDNARFHRMAVLREMAQRAGHIILPLPPYSPELNP IEKVWANIKRHLRKVMSGCLSFEQALLYFVFDYI >gi|257257220|gb|ACDX02000020.1| GENE 2 499 - 849 294 116 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148984739|ref|ZP_01818007.1| IS630-Spn1, transposase Orf1 [Streptococcus pneumoniae SP3-BS71] # 1 116 1 116 116 117 44 7e-26 MAYSIDFRQKALDHYEQHGNISQTARTFRITNRTLYQWIALKKETGSLQHRTKGGNSERI DKEELRRYVAEHPDAYQYEIAQHLGCTASNVGYLLKTLKITRKKRQPSTKNKTSKK >gi|257257220|gb|ACDX02000020.1| GENE 3 959 - 2416 1866 485 aa, chain - ## HITS:1 COG:NMB0852 KEGG:ns NR:ns ## COG: NMB0852 COG1160 # Protein_GI_number: 15676748 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Neisseria meningitidis MC58 # 1 485 1 485 485 905 97.0 0 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKIGSKPYLVIDTGGF EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK GEGGNRAVLAAEFYELALGEPHVISGAHGDGVYYLIEEILEKFPEPEAEETEVKHPVFAV IGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAGVRRRGKVD EAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVAVNKWDGIS EEWREQIKRDISRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIKMSTPKITRV LQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLTQTFRKAFN LQGTPLRIQYNVSENPYENAEDKPKKKPLRRVSLSNRIEKREGRKEEKNRFKKKTKVSVK KQHSK >gi|257257220|gb|ACDX02000020.1| GENE 4 2713 - 3342 878 209 aa, chain - ## HITS:1 COG:NMA1064 KEGG:ns NR:ns ## COG: NMA1064 COG2976 # Protein_GI_number: 15794013 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 209 1 209 209 244 75.0 8e-65 MAAHLEEQQELDNFKYFWKSTGRWLFALLMAAALGYLGYTMYKSHKASKNQEAAAVLAKI VDKMQAKASQAEVNADLTNLQQNYSDSIAAAQATLMAAATEYDARRYDVAEGHLNWVLQN QKAPLIQALAAQRLGIVLLQQKKYDAAIAALNTKVEADFEPLLLEAKGDVYAAQNKTKEA AQSYQQALEKLPKDAIERELLQMKLDSQK >gi|257257220|gb|ACDX02000020.1| GENE 5 3343 - 4638 1539 431 aa, chain - ## HITS:1 COG:NMB0854 KEGG:ns NR:ns ## COG: NMB0854 COG0124 # Protein_GI_number: 15676750 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Histidyl-tRNA synthetase # Organism: Neisseria meningitidis MC58 # 1 431 1 431 431 817 95.0 0 MAQKIQSVKGMNDLLPVEQKDFKLTAAFWQAFEDVVGSWTRAYGYQQIRTPIVEQTGLFV RSIGEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVEHNLLYNSPQKLWYMGPMF RRERPQKGRYRQFHQVGIEALGFEGPDIDAEIIAMSADLWDKLGIRDYLTLEINSLGNRE ERAAHRAALVEYLTCYEDKLDEDSKRRLKTNPLRVLDSKNPDLQEICNAAPHLTDYLGEE SRNHYSRFKAMLEGLGIQYVENPRLVRGLDYYNQTVFEWTTDKLGAQATVCGGGRYDGLI EELGGKPAPSIGFAMGIERLLLLVSEYGSLEVNAAPDVYAMHQGGGADLQVMKYAQALRA QGFNVMQHSGYQSLKAQMKKADNSGARFALIVAQDELANGTVTLKDMNGAHGQQTVAADD LIHTLQQWKNA >gi|257257220|gb|ACDX02000020.1| GENE 6 5364 - 5696 229 110 aa, chain - ## HITS:1 COG:no KEGG:NMO_1205 NR:ns ## KEGG: NMO_1205 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 2 110 50 159 159 122 60.0 5e-27 MFNFVNQYGENNERDISFLGYKQNLGYEDIYSYSCIDDEYGYAKKVIAFGISANGDYICF DYRKCNENPCIILMRHDDFYEDENGDTKMVTSHIADSFDAFLDMLYELSD >gi|257257220|gb|ACDX02000020.1| GENE 7 6277 - 6555 358 92 aa, chain - ## HITS:1 COG:NMA1199 KEGG:ns NR:ns ## COG: NMA1199 COG3039 # Protein_GI_number: 15794143 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS5 family # Organism: Neisseria meningitidis Z2491 # 1 89 1 89 335 179 95.0 1e-45 MSTFFQQTAQAMIAKHIDHFPLLKLDQVIDWQPIEQYLNRQRTRYLRDHRGRPAYPLLSM FKAVLLGQWHSLSDPELEHSLVIHIDFNLRPL >gi|257257220|gb|ACDX02000020.1| GENE 8 7562 - 8485 762 307 aa, chain + ## HITS:1 COG:NMA1085 KEGG:ns NR:ns ## COG: NMA1085 COG0564 # Protein_GI_number: 15794033 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthases, 23S RNA-specific # Organism: Neisseria meningitidis Z2491 # 1 307 1 307 307 525 84.0 1e-149 MKKRSNPLPLLNGVKPSYLVLPHEKEFYGLPLLHFLCTRFPFIGEENWRRRLNSGFVVGA DGVPLNEHTVFEAGKTMFYYRETSRDSEPQIPFEEKILFVDEHLIVVDKPHFLPVIPSGR FLRETLLTRLRLRPELQHLNVADITPIHRLDKDTAGVMLLSHNPATRRDYQTMFQNKTVC KTYEAIAPTRTDLAYPLNISSRMVRGEKFFTTLEVEGEPNAHTTVELIENRGAFSLYRLT PHTGKKHQLRVHMMSLGMPLMNDALYPVPSAAGDEDYGKPLKLLAKRIEFTDPVSGQARM FESGFEL >gi|257257220|gb|ACDX02000020.1| GENE 9 8595 - 10088 2327 497 aa, chain - ## HITS:1 COG:YPO2188 KEGG:ns NR:ns ## COG: YPO2188 COG1502 # Protein_GI_number: 16122418 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes # Organism: Yersinia pestis # 2 497 3 486 486 367 39.0 1e-101 MTFLKDITWTEIFIFAHTCAALGCVLRVLYKQKNIGSTFAWLIILFLFPVFGTIAYLLIG EPRLGTARAKRTGEMNRFYQSFAETYLSEIYLGVGDNVKSRYHGISRVAAKGTGLGATRN NAMTLLSTTDEIIDTMLADIRAARHSCMLAFYIIEPEGRIEELLNELLAAADRGLDCAIL ADAVGSSRFFDSGWVETLREAGIEVHASLPVGVWRTFFTRTDLRNHRKILVIDSKIGYTG SFNLVDPRFFKKDSGVGEWVDVMMRCTGPMVLELSAIFFADLAVETDENLEGVQQYLTQA QERIPEILPEKMQQGDIVAQVIPSAPEQGSHVIYETIISAIYAATKQITITTPYFVPDEP LLMALTIAAKRGVKVTLILPAKVDSLMVRYASRAYYPMLLDAGVKIAMFKGGLLHAKTMT IDEDYVLFGTVNMDMRSFFLNLEISLAIYDRDITKQICNLQRDYLKNSSYITVKAWQQRS KFRGLIENTVRLVSPLL >gi|257257220|gb|ACDX02000020.1| GENE 10 10235 - 11296 1635 353 aa, chain - ## HITS:1 COG:NMB0781 KEGG:ns NR:ns ## COG: NMB0781 COG0407 # Protein_GI_number: 15676679 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III decarboxylase # Organism: Neisseria meningitidis MC58 # 1 353 1 353 354 710 96.0 0 MTSLKNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAGSFLDLCKNTELATEVT IQPLERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFEHALQHEADIAKLQVPDMEKL QYVFDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGSSKEFRTIKTMMYSRPDLLHKI LDTNAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEGR RVPVIVFAKGGGLWLENMAEIGADALGLDWTCNIGEARHRVGNQVALQGNFDPFALFGTP ESIRTEVARILADYGHGSGHVFNLGHGINQHADPEHAKILVDAVHELSRQYHA >gi|257257220|gb|ACDX02000020.1| GENE 11 11416 - 12639 1728 407 aa, chain - ## HITS:1 COG:NMB0779 KEGG:ns NR:ns ## COG: NMB0779 COG3071 # Protein_GI_number: 15676677 # Func_class: H Coenzyme transport and metabolism # Function: Uncharacterized enzyme of heme biosynthesis # Organism: Neisseria meningitidis MC58 # 1 407 1 407 407 549 73.0 1e-156 MKAVVWIVVLFAAAVGIVLTSGVYTGNVYIVVGQVMMRVNLHAFILGLVLFVVALYFLIK FIVGLMNIPARMQRFGTARKGRQAAVALNSAGLAFFEGRFEKAEQEAAKVLENKEAGDNR NLALMLGAHAADQMENFELRDHYLKDIEKLPNKQQLSRYLLLAESALGRRDYPTALENLN AAARIHPNLSRLARLQLRYAFDHGDAEDVLAKSEKLMKAGAINDFEAEQYQSWAYRRLLA EASDAARLKACLKRIPEALKADELCVAIAEKYERLGLYTEAVKWVRHYYPQNRRPELLEA FVESVRFFNERGQQKAIDLADSWLKDKPDDAPLLMYLGQLAYGRSLWGKAQSYLEASIAL QPSIAARLMLARVLDETGQPQKAQEQRKLVLEAVSEEERHAALEQHS >gi|257257220|gb|ACDX02000020.1| GENE 12 12636 - 14168 1795 510 aa, chain - ## HITS:1 COG:NMB0778 KEGG:ns NR:ns ## COG: NMB0778 COG2959 # Protein_GI_number: 15676676 # Func_class: H Coenzyme transport and metabolism # Function: Uncharacterized enzyme of heme biosynthesis # Organism: Neisseria meningitidis MC58 # 62 510 21 424 424 471 65.0 1e-132 MSRSEDNPSEANEAGRPIIVDSQGNAESSETAAPKKVKQPKTSEYAGTHMSESKNLPQNQ PAPVIIKQSGGRGLAVGALVLALLGLGASGFLFVQGQNVLKNQELSFNQKLDKAALGESE NALLLKDHLNRQTTIQAELERLGKAQMANSEQILLTQKAYQELTKGRVNWLVDEAETMLN LASQQLLLSGNVQGAAAVLEHIDSRLSRFDQSELLPIKQAVSHDLAALKNRPYVDISGTA LRLDRLETAVSGLPLVLDGVLQPGEQAQSNGVSSGSWWQNAWDKSLVALKGLVEVRRLDN KDAMLLSPEQAYFVRENLRLRLLDARTALMQHNGEVYQSDLNYVEAAVRQYFDGKSPATQ AWLKELSELKALDVRMISDDSLKASLSAVRAYQDGTRTPVALPEPVTTAASAPLPSAASE AATPQTAAPVNETAFAPKTASAPKAPHPAKARPAPAQKPAPAAQTEAKPLEAPALPSEAK PQNIPEPEKKAAPEKQNRPAADVETKGGRA >gi|257257220|gb|ACDX02000020.1| GENE 13 14155 - 14886 432 243 aa, chain - ## HITS:1 COG:NMB0777 KEGG:ns NR:ns ## COG: NMB0777 COG1587 # Protein_GI_number: 15676675 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III synthase # Organism: Neisseria meningitidis MC58 # 4 232 1 229 246 303 66.0 2e-82 MPVMLIVRPSARAGDDVRTCSQAGWSARVLSPVEIEPDETALLGLKEQFSRADAVFWVSP TAVETAAPYVDFSDDLKAQIAVGQASGRALQRCSAKNVFVPQEGNDSEAVLRLPVWDTLP PNARVLIVRGRGGRDFLAESLKKKGFAVEIAEVYFRRPNELNWQDFDAESIDAAFITSGE LARGLFAQVPPQFSRFFESLLYFTHHPRIADALREAGARHIRVVASLKAALSSFPKEQTD EPV >gi|257257220|gb|ACDX02000020.1| GENE 14 15173 - 15469 383 98 aa, chain - ## HITS:1 COG:no KEGG:NT05HA_1184 NR:ns ## KEGG: NT05HA_1184 # Name: not_defined # Def: hypothetical protein # Organism: A.aphrophilus # Pathway: not_defined # 1 95 2 96 97 116 64.0 3e-25 MTQSTDITLTFDEIIAVSHCHRDWLLELIEEDIISIGGKPEQTTFSGFHLARIRRAQRLS RDFEAGIPALGLIMRLLDEVEELRKAQRPSVLLEEEGQ >gi|257257220|gb|ACDX02000020.1| GENE 15 15485 - 16444 1011 319 aa, chain - ## HITS:1 COG:cbpA KEGG:ns NR:ns ## COG: cbpA COG2214 # Protein_GI_number: 16128966 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone # Organism: Escherichia coli K12 # 1 312 1 292 306 207 39.0 3e-53 MAEKNYYEILGVAKDADEAAIKKAYRKLVRKYHPDVSKEPDAVERTAEINRAYETLSDKE KRAEYDEMLANPYGRNAGGNPFGQDGNPFGKGFDGGSFRYEYREGEPFGAGDFNFEDLFS SFRHAGSRPEQPRGPVKGEDQHAELSIDIYAAYTGAERSLTLNVPTLDEYGRMAYQSKTL NVKIPKGIAEGQQIRLAGQGLPGSNGGANGDLYLKIKFHDRSDLYVKNRKDVYQTIDVKP WEAVLGGKIIVPTASGRLQVNLPANTQSGKTIRLKGKGIPAKEAGDLYLNIRINVPVAES EADRAAWEKLAEHFAAKHA >gi|257257220|gb|ACDX02000020.1| GENE 16 16591 - 16986 240 131 aa, chain - ## HITS:1 COG:no KEGG:NMC1014 NR:ns ## KEGG: NMC1014 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 128 1 115 121 119 58.0 5e-26 MFKRPEEIIVLVLAVLWVVLTYFLAAFCGADAYTVMLITGLTLIWAAVCFRFWQKGWERT IWPVFLGCLVACWWPMLDWLAVKDIIVPNSEAAAIVVVKPWYANWIFKSFLALLPVVAGY ALKWKRSRNVQ >gi|257257220|gb|ACDX02000020.1| GENE 17 17203 - 18279 1633 358 aa, chain + ## HITS:1 COG:TM0561 KEGG:ns NR:ns ## COG: TM0561 COG0598 # Protein_GI_number: 15643327 # Func_class: P Inorganic ion transport and metabolism # Function: Mg2+ and Co2+ transporters # Organism: Thermotoga maritima # 68 358 61 351 351 239 41.0 5e-63 MMNTPPAPEKIPAEIPQDQTVPRSNTDNAPRSAIHQTLYSTDTFAQHDYLAGKKLPDIVR PQAGQTNWLHFVGINNAALLKHTLEPYGIHELVIEDILSRKQRPKIEDYGNYLFIAAQVY HYTAAGKLNSDQVYLIIGKDFVLSFQQKPLGLFSQLRRQMSENLRGILGKNTAFLAYCLL DRIVDDYFIVLEEYNNRVEAIDKSLFKNENSDILGKIHRLKRDAVRLRRTLLPLRDVFYQ LAVRGDFAIFKGESTVYLRDVYDHNMQLLESLDASRDMVLSMMDIYLSFQSNRMNQQMRV LTVITIIFMPLTVITGIYGMNFDNMPELHWHYGYFMVLGLMLCIIVGLLIFFSRRKWL >gi|257257220|gb|ACDX02000020.1| GENE 18 18412 - 18894 636 160 aa, chain + ## HITS:1 COG:NMB1482 KEGG:ns NR:ns ## COG: NMB1482 COG1607 # Protein_GI_number: 15677335 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA hydrolase # Organism: Neisseria meningitidis MC58 # 1 160 1 160 160 306 91.0 1e-83 MEQARQLPSHELIMSELMMPDTANFSGNVHGGELLRLLDQVAYSCASRYSGNYCVTLSVD KVLFKEPIHVGDLVTFYASVNYTGRTSMEIGIRVEAQNIRTGEVRHTNSCYFTMVAVEDG KPVPVPPLEIITERQRCRYEKAKKRKALSLQTSDETSCGC >gi|257257220|gb|ACDX02000020.1| GENE 19 19130 - 20137 1278 335 aa, chain + ## HITS:1 COG:NMB1539 KEGG:ns NR:ns ## COG: NMB1539 COG3039 # Protein_GI_number: 15677391 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS5 family # Organism: Neisseria meningitidis MC58 # 1 335 1 335 335 635 94.0 0 MSTFFQQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQRTRYLRDHRGRPAYPLLSM FKAVLLGQWHSLSDPELEHSLITRIDFNLFCRFDELSIPDYSTLCRYRNWLAQDDTLSKL LELINCQLTEKGLKIEKASAAVIDATIIQTAGGKQRQAIEVDEEGQVSGQTTPSKDKDAR WTKKNGLYKLGYKQHTRTDEEGYIEKLHITPANTHECNHLSPLLEGIAEDTTVYADKGYD SAENRQHLEEHRLLDGIMRKAYRNRPLTEAQTKRNRYLSKTRYVVEQSFGTLHRKFRYVR AAYFGLIKVSAQSHLKAMCLNLLKAANRLSVPVAA >gi|257257220|gb|ACDX02000020.1| GENE 20 20355 - 20816 287 153 aa, chain + ## HITS:1 COG:SP0016 KEGG:ns NR:ns ## COG: SP0016 COG3335 # Protein_GI_number: 15899965 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 42 152 1 111 112 140 57.0 1e-33 MPKVYLDETGFDTFYYRPYAYALRGQIVKARISGKRYERMSLVAARGDRELVAPMIYKGT MDSSLFEAWFGQFLLKELKEPSVIIMDNARFHRMAVLREMAQRAGHIILPLPPYSPELNP IEKVWANIKRHLRKVMSGCLSFEQALLGIFCFV >gi|257257220|gb|ACDX02000020.1| GENE 21 21668 - 22228 272 186 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 3 181 480 665 904 109 38 3e-23 MPWNIPIFLTWMRVLLIPVFTLLFFLPKGWIAPETVNWTAAIIFALAAVTDWFDGFLARL WKQTSDFGAFLDPVADKLMVATALLLLVSLGRTYVIFAIIIIGREITISALREWMAQMGR RSSVAVATIGKFKTAAQMVAIFLLLLASNRFDNIFYLTGNILMFIASVLTLWSMFYYLKM AWQEIK >gi|257257220|gb|ACDX02000020.1| GENE 22 22330 - 22875 338 181 aa, chain - ## HITS:1 COG:PA0262_2 KEGG:ns NR:ns ## COG: PA0262_2 COG4253 # Protein_GI_number: 15595459 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 6 159 308 459 463 74 31.0 1e-13 MSKRWRRLTDNEIKMAKLIFADSIDYARVKIYQGIPCLPTMQVAVSPNGNIYFPRNNCPD DFALASESHQIWMIHELTHVWQYQQGFKTWLGGLFLFVSGGYRRRRAYLYPKLSDICHFS MLNMEQQADLLAHYYASCYLKGNIYNAQNQTFQKILKSFIEDPCQKEWLPQCRFYRKNKR T >gi|257257220|gb|ACDX02000020.1| GENE 23 23066 - 23635 668 189 aa, chain - ## HITS:1 COG:NMA1667 KEGG:ns NR:ns ## COG: NMA1667 COG3198 # Protein_GI_number: 15794561 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 183 1 182 182 295 77.0 3e-80 MSEQKQVKPWYKHIWPWVLMAGPIFVVIASVAMFFVAKEHATDLVTDDYYKDGKHIDIQL HRDEEAVKRHMQVQVLISPDKDAAKVFVSGEFDPKQPLNLLLMHPTKKSEDQTVKLHPVS AEIQNGRMEYEATFKPLPPTNHWYLRVEDTSGVWRVEDKWIVSQGNAINLTPMNKLFENA NQKPKDSGQ >gi|257257220|gb|ACDX02000020.1| GENE 24 23639 - 25159 1742 506 aa, chain - ## HITS:1 COG:NMA1668 KEGG:ns NR:ns ## COG: NMA1668 COG0348 # Protein_GI_number: 15794562 # Func_class: C Energy production and conversion # Function: Polyferredoxin # Organism: Neisseria meningitidis Z2491 # 1 506 1 498 498 908 85.0 0 MSTENQAENAAAEETPAAPKESSEKPAKPAKMAPPKPINPRASVIQIHPEGERIHPKKAE GRFAKLRIAAVLATQFVFYVIPWFNWSGRQAVLFNIPDRHFFIFGLSLGMGDLIYLALLL MICAFGLFWWTTIAGRLWCGYSCPQTVYTEIMLWIDNLVEGDRNKRLKLEKSPWNFTKIR IKATKALLIFLFCAWTGITFAGWFTPIRQFVPALFGGVAGGGAMFAAAFYGFVTFFFAHI MREKVCLHMCPYARFQSAMFDKDTLIISYDAERGEPRGARKKTVNKEESGLGDCINCAMC VQVCPVGIDIRNGLQYQCIGCAACIDACDEIMDKMGYPRGLIRYTTEGALEHEYPESDIK KRLKRPRVAGYGAVLLVVIIAFLVGLSTRKMVEVDILKDRGVMVRENSKGWLENAYNLRI INNSENEQVMTAAVKGFEEIALTGLPEGGVKIAPRETLTIPVQVSTIPEYANKGSHPIEF TFTYRETGKADGEPIILEEEATFIGE >gi|257257220|gb|ACDX02000020.1| GENE 25 25668 - 27647 3086 659 aa, chain + ## HITS:1 COG:NMB1457 KEGG:ns NR:ns ## COG: NMB1457 COG0021 # Protein_GI_number: 15677313 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase # Organism: Neisseria meningitidis MC58 # 1 659 1 659 659 1299 97.0 0 MSQLANAIRFLSADAVQKANSGHPGAPMGMAEMAEVLWTKFLHHNPANPKFYNRDRFILS NGHASMLLYSLLHLTGYNLSIEDLKNFRQLHSKTPGHPEYGYTDGVETTTGPLGQGIANA VGMALAEKILAAEFNKDGLNIVDHYTYVFMGDGCLMEGVSHEACSLAGTLGLGKLIVLYD DNNISIDGKVDGWFTENIPQRFESYGWHVVPNVNGHDTAAIQAAIEAAHAETGKPSIICC KTLIGKGSANKEGSHKTHGAPLGADEIEATRKHLGWTYPAFEIPQEIYDAWSAKEQGAKL EAEWNELFAQYQAKYPAEAAEFVRRMNKKLPDNFDAYVQAALKEVCAKAETIATRKASQN SIEILAKELPELVGGSADLTPSNLTDWSNSVSVTREKGGNYIHYGVREFGMGAIMNGLAL HGGVKPFGATFLMFSEYERNALRMAALMKINPVFVFTHDSIGLGEDGPTHQPVEQTATLR LIPNMDVWRPCDTAESLVAWAEAVKAEDHPSCLIFSRQNLKFQARNEQQLNDIKRGGYVI SEAQGNAQAVIIATGSEVELALEAQKALAAQNIAVRVVSMPSTNVFDRQDTAYKAAVLPE GLPRIAVEAGHADGWYKYVGLNGAVVGLNRFGESAPAELLFKEFGFTVDNVVDTVKSVL >gi|257257220|gb|ACDX02000020.1| GENE 26 28043 - 30055 2545 670 aa, chain + ## HITS:1 COG:Cj1055c KEGG:ns NR:ns ## COG: Cj1055c COG1368 # Protein_GI_number: 15792382 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily # Organism: Campylobacter jejuni # 9 616 2 607 657 257 28.0 4e-68 MITRLAAYRKTLLTCLVLWVSIVAVFSAERFFMLHHFVSDDIRSRYAGDLAALFVKGLLF DIKIASVAAALTFLIGLFGLATQKTAAFTLRLLPTVATVLSLTAFAAALGNWFYFSVYDR QFDVFVFGLAEEDTSAVLKTVWSDYPVISCLAALIAAAFVLGKMFSLIRRSTRFQTTSWG KTAWIAAILLPTLALAAGIRGSFGKFPLRQTAMQISAAPQINKLVPNALTSLSWAVNEYR NSNDFHPVSDEDGSRLISTLLDKKTDADLTQLFAQTAPNPAVEKHRPNVVFTVMESMSAH LLNMDNPERDLLGELGNHWQQDWVYRKFVSEGDGTSDSLHRFFVRSPRLNLSQSLAKNKT FPGNMFKPYLEAGYHVVYITAGNGGWRDFDTFLRHLGVNEIIDENTLKTRYPEAKSGTWG VPDEFMFRYAEEELARAEKSGTPVFIMMMSVTNHPPYHLPAPHQLKNFRLEEQEQKRLAN LASGKELNEIFNTFRYSNDQLGRFIGKVKTIAPDTIIAATGDHNMRAIGYPESADAALGH SVPFYLYVPQAYRGSAEYHPERAGSHKDILPTLYNLSLSEARYYQTGCNLTAPLPDSPWC GYGYNPEVIITERGFYHQHSKAFHKWDNQNIQTAESRPSTPDGEDQAIIRRASAYTPFLE WQINRIVSTQ >gi|257257220|gb|ACDX02000020.1| GENE 27 30214 - 30993 1195 259 aa, chain + ## HITS:1 COG:NMB0895 KEGG:ns NR:ns ## COG: NMB0895 COG3022 # Protein_GI_number: 15676791 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 1 259 1 259 259 452 87.0 1e-127 MFFVLSPAKNLNEKEPAPVKEFTQPDLLAEAEILMRQLRELAPQQIAELMHVSDKIALLN AERNAEWHTPFTPDNAKQAVFMFNGDVYEGIAADTLKPEQIQYLQQHVRLLSGLYGVLRP LDLMQPYRLEMGTAFANTRGKNLYEFWGDIITDLLNDTFAQADSDILVNLASQEYFKSVN TQKLKARLITPVFKDEKNGKYKIISFYAKRARGLMVRYAAEHNIADPEMLKNFDYEGYAF NEAASNESEWVFMRKEQTK >gi|257257220|gb|ACDX02000020.1| GENE 28 31515 - 31865 299 116 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148984739|ref|ZP_01818007.1| IS630-Spn1, transposase Orf1 [Streptococcus pneumoniae SP3-BS71] # 1 116 1 116 116 119 50 2e-26 MAYSTDLRHKALNYYEQCKNISQTAATFNLSRNTLYLWIRLKKQTGSLKHQVTGLNAVKL DRQKLAQYVKQHQDAYLHEIAKHFDCTPAAVCYALKQMGMTRKKRPPLTKNKTRPK >gi|257257220|gb|ACDX02000020.1| GENE 29 31769 - 32191 73 140 aa, chain + ## HITS:1 COG:SP0300 KEGG:ns NR:ns ## COG: SP0300 COG3335 # Protein_GI_number: 15900234 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 87 138 2 53 112 62 53.0 2e-10 MYASRRLLCTQTDGDDAQKKTTTYKEQDPAKVTHYLTQPAEFSDYQRVYLDETGFDRYLF RPYARSLRGQIVKAQISGKRYQRLSPVSAQVGNRLIAPMVYQNTMTGVFFEAWFEQCLLP ALTQKSVIILDNETFAKIVC >gi|257257220|gb|ACDX02000020.1| GENE 30 32502 - 33488 1006 328 aa, chain - ## HITS:1 COG:NMA1185 KEGG:ns NR:ns ## COG: NMA1185 COG3547 # Protein_GI_number: 15794129 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Neisseria meningitidis Z2491 # 16 328 6 318 318 554 93.0 1e-158 MQGRFMMSTQHNYAGIDIAKRNFVIAVSSLSKTKTETNNPKGIAHTIEYLKKHNVALVVM ESTGGLEIPAAKAIHHAGIAVIIANPRQTHQFAQSQSLTKTDAKDAKMLAFFAQMTAQKE DWQTMLYHPPTEAEEVLEALVNRRNQLVDMRIAEKNRLHQVHETQVESVKQLIAHFDRLI DELDKQIDDHTHTHFDGKAQVAEQIKGIGSITTATLMAMLPELGRLSHKRLASLVGIAPH PRESGETKFKSRCFGGRSAVRKALYMATVVATRFEPLIRDFYQRLLSKGKPYKVAITACM RKLLTILNARMRDYFAENGITENGIRTA >gi|257257220|gb|ACDX02000020.1| GENE 31 33871 - 34764 862 297 aa, chain - ## HITS:1 COG:VC1151 KEGG:ns NR:ns ## COG: VC1151 COG2431 # Protein_GI_number: 15641164 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Vibrio cholerae # 5 292 2 300 301 88 27.0 1e-17 MESSLSSIFIVLALLSTGFLSGKFLAPPLRQVLLKPLSFIVLLLLFFMGYEFGGVFTDPN LGADIVKYALLLALIISAFTLIALYRKPEASTAPTPSGSFIKPFYGCFKAFAFFGLGVAA FAFFVRQVGNLPIDSTHILYLLIFMVGMDLVHFQLGGFGRRIFLLPLLTVAATAAACFVF SLCSPYSFAQSLVLSGGFGWFSLSGPMVGKAVSPEMGAAAFMTDFFREMISIVFLYFYGR KQPMAAIGISGAAAMDSALPFVKENCRAEYIKYAVVSGFILTLVAPFFLSAAIAMLN >gi|257257220|gb|ACDX02000020.1| GENE 32 34984 - 35304 431 106 aa, chain - ## HITS:1 COG:SP1928 KEGG:ns NR:ns ## COG: SP1928 COG3293 # Protein_GI_number: 15901752 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 5 103 24 124 129 80 46.0 6e-16 MGAQHDMRLARRHLTELYPYKIVIADKGYQGLAKTGLQTPKKKSKHHLMNKQDKEANRRL GKLRTVIEHINRKLKIFKILSLPYRNRRKRFGLRANLIAGLINAMG Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:16:13 2011 Seq name: gi|257257218|gb|ACDX02000021.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont20.1, whole genome shotgun sequence Length of sequence - 34773 bp Number of predicted genes - 26, with homology - 26 Number of transcription units - 20, operones - 5 average op.length - 2.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 41 - 391 392 ## NLA_8450 transposase - Prom 512 - 571 2.2 + Prom 332 - 391 4.5 2 2 Tu 1 . + CDS 563 - 1279 962 ## COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase + Term 1301 - 1352 14.5 - Term 1293 - 1335 9.1 3 3 Tu 1 . - CDS 1375 - 2325 1520 ## COG0385 Predicted Na+-dependent transporter - Prom 2373 - 2432 6.4 + Prom 2615 - 2674 5.7 4 4 Tu 1 . + CDS 2736 - 3956 1572 ## COG0786 Na+/glutamate symporter + Term 3986 - 4027 4.2 + Prom 3975 - 4034 4.3 5 5 Tu 1 . + CDS 4081 - 5088 1086 ## NMO_1941 hypothetical protein + Term 5115 - 5164 11.6 6 6 Tu 1 1/0.250 + CDS 5478 - 8093 3549 ## COG1012 NAD-dependent aldehyde dehydrogenases + Term 8197 - 8237 7.3 + Prom 8222 - 8281 1.6 7 7 Tu 1 . + CDS 8316 - 9110 797 ## COG3293 Transposase and inactivated derivatives + Prom 9144 - 9203 2.3 8 8 Op 1 3/0.125 + CDS 9309 - 9653 449 ## COG5416 Uncharacterized integral membrane protein 9 8 Op 2 . + CDS 9666 - 10835 1733 ## COG2956 Predicted N-acetylglucosaminyl transferase + Term 10846 - 10896 12.0 10 9 Tu 1 . + CDS 11940 - 14783 2484 ## gi|288576293|ref|ZP_05978540.2| conserved hypothetical protein + Term 14795 - 14843 13.2 - Term 14789 - 14826 8.0 11 10 Tu 1 . - CDS 14845 - 15639 978 ## COG0207 Thymidylate synthase + Prom 16013 - 16072 11.8 12 11 Tu 1 . + CDS 16184 - 17521 2304 ## COG0334 Glutamate dehydrogenase/leucine dehydrogenase + Term 17549 - 17606 19.1 + Prom 17575 - 17634 6.0 13 12 Op 1 2/0.250 + CDS 17657 - 19018 1378 ## COG0612 Predicted Zn-dependent peptidases + Prom 19043 - 19102 3.9 14 12 Op 2 . + CDS 19155 - 20069 1060 ## COG1752 Predicted esterase of the alpha-beta hydrolase superfamily + Term 20096 - 20143 11.2 - Term 20333 - 20387 9.5 15 13 Op 1 8/0.000 - CDS 20406 - 21593 1801 ## COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component 16 13 Op 2 3/0.125 - CDS 21583 - 23601 2136 ## COG1333 ResB protein required for cytochrome c biosynthesis - Prom 23684 - 23743 4.0 - Term 23621 - 23658 0.1 17 14 Tu 1 . - CDS 23861 - 24487 894 ## COG2863 Cytochrome c553 - Prom 24548 - 24607 6.8 + Prom 24487 - 24546 6.8 18 15 Tu 1 . + CDS 24688 - 25341 843 ## COG0218 Predicted GTPase + Term 25536 - 25582 8.1 - Term 25524 - 25570 12.4 19 16 Op 1 30/0.000 - CDS 25592 - 26029 569 ## COG0848 Biopolymer transport protein 20 16 Op 2 6/0.000 - CDS 26033 - 26692 673 ## COG0811 Biopolymer transport proteins 21 16 Op 3 . - CDS 26760 - 27581 424 ## COG0810 Periplasmic protein TonB, links inner and outer membranes - Prom 27695 - 27754 6.7 - Term 28078 - 28131 -0.2 22 17 Tu 1 . - CDS 28197 - 28661 573 ## COG1959 Predicted transcriptional regulator - Prom 28756 - 28815 6.9 + Prom 28715 - 28774 3.7 23 18 Op 1 . + CDS 28831 - 29211 303 ## NLA_4810 hypothetical protein + Term 29218 - 29278 12.4 + Prom 29242 - 29301 2.7 24 18 Op 2 . + CDS 29324 - 30481 1166 ## COG3213 Uncharacterized protein involved in response to NO + Term 30501 - 30559 16.5 - Term 30741 - 30790 16.3 25 19 Tu 1 . - CDS 30821 - 34108 2497 ## COG3419 Tfp pilus assembly protein, tip-associated adhesin PilY1 - Prom 34171 - 34230 5.3 + Prom 34252 - 34311 3.0 26 20 Tu 1 . + CDS 34332 - 34730 624 ## COG3039 Transposase and inactivated derivatives, IS5 family Predicted protein(s) >gi|257257218|gb|ACDX02000021.1| GENE 1 41 - 391 392 116 aa, chain - ## HITS:1 COG:no KEGG:NLA_8450 NR:ns ## KEGG: NLA_8450 # Name: not_defined # Def: transposase # Organism: N.lactamica # Pathway: not_defined # 1 116 106 221 221 208 96.0 5e-53 MSKYTLHFKYQAVLHYLHIRSQQRTADHYGISRTHLRRWIRAYQEGGIGALEHPQSKTMT DHRKNPFIADKPDHEKTQAELIEELCYMRAKVAYLKELKALSQKRTEKDKAKPSKH >gi|257257218|gb|ACDX02000021.1| GENE 2 563 - 1279 962 238 aa, chain + ## HITS:1 COG:NMA0410 KEGG:ns NR:ns ## COG: NMA0410 COG2227 # Protein_GI_number: 15793415 # Func_class: H Coenzyme transport and metabolism # Function: 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase # Organism: Neisseria meningitidis Z2491 # 6 237 5 236 238 395 78.0 1e-110 MEAAGQHNVDADEIAKFSQIADKWWDKNGEFKPLHDINPLRLGYIDSFAQLAGKRVLDVG CGGGILSESMAKRGAAHVTGIDMAEKSLQTAQAHAAAEGVDNIDYRCIRVEDLAAEQPHS FDVVTCMEMMEHVPNPAAIVKACSELVKPDGMVFFSTINRNPKSYLHLIVGAEYVLNVVP KGTHDWQKFITPAELARMCRQAGLDVINTKGMTYNLLTRRYSLCDSTEVNYMIACRPV >gi|257257218|gb|ACDX02000021.1| GENE 3 1375 - 2325 1520 316 aa, chain - ## HITS:1 COG:NMA0046 KEGG:ns NR:ns ## COG: NMA0046 COG0385 # Protein_GI_number: 15793077 # Func_class: R General function prediction only # Function: Predicted Na+-dependent transporter # Organism: Neisseria meningitidis Z2491 # 1 315 2 316 318 440 84.0 1e-123 MNFLTAVSRQMTRFTALIIVLASVVAFIEPATFSWVKGDTQVIVLGIIMLGMGMTLGKED YQILAKRPLDIFIGAVAQYTIMPLLAIGIAKAFNLSPGLTLGLVLVGTCPGGVSSNIMSF LAKGDVAFSVGMTTVSTVLAPVMTPLWMTYLVGQTVEMDGWGMFKFMLLVTLLPVVIGSV ANILLHKKHWFEDVRAIMPAVAVVAFACIVGGVAAVHGHRFAESALVMVLAIAAHNIGGY ILGYYSGALTGMNTAKKRTLAIEVGVQNAGLATGLSAKFFPGNAESAVATAVACVWHSVS GTVLGNLFAWWDKRKQ >gi|257257218|gb|ACDX02000021.1| GENE 4 2736 - 3956 1572 406 aa, chain + ## HITS:1 COG:NMA0183 KEGG:ns NR:ns ## COG: NMA0183 COG0786 # Protein_GI_number: 15793211 # Func_class: E Amino acid transport and metabolism # Function: Na+/glutamate symporter # Organism: Neisseria meningitidis Z2491 # 1 402 1 400 404 665 88.0 0 MEWEFNSYYTLIAATLVLLIGKVLVNKVKFLRDFNIPEPVAGGLIAAIILFALHQAYGVS FKFEKPLQDAFMLIFFTSIGLSADFSRLKAGGLPLVIFTAVVGAFIVVQNFVGVGLAKVL GLDPLIGLITGSITLTGGHGTAGAWGPDFESKFGLVGATGLGMASATFGLVFGGLIGGPV ARRLINKMGRKPIEPSARKENADEHTDDVFEQAKRTRLITAESAVETLAMFAACLAFAEI VDGYDKEYLYDLPKFVWSLFAGVVIRNILTSAFKVNMFDRAIDVFGNASLSLFLAMALLN LKLWELTGLAGPVTIILAVQTVVMILYATFVTYVFMGRDYDATVLAAGHCGFGLGATPTA VANMQSITQTFGPSHKAFLIVPMVGAFFVDLINAAILSGFVNVITK >gi|257257218|gb|ACDX02000021.1| GENE 5 4081 - 5088 1086 335 aa, chain + ## HITS:1 COG:no KEGG:NMO_1941 NR:ns ## KEGG: NMO_1941 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 17 335 17 338 338 335 56.0 2e-90 MNKKLLALPLVLILAACGKDEPKQALECNHPAAIQSIKTQIQNIIRQEARAFARNDSRQF VDADKVIAAGSELEIGLNNAQQIDEDNKTMCSADLSIRVPADVLNAAEDNSPLIYSETTL AEILEQKLTGSNLKFADNTLSTSVRYTPDKDGNAVLEDNTVSMTARTLSSLLLPYGVKSI VMIDGKAVSKEDAMKLLKGKYDEPPVVSPEDILENNAASQASGVPQAAGLETEILRPDAE AKREEPSFSQSDLDNARSQNRNADSEIQRIWDGMEHTVQKELLTEQRAWIQNKIQNCQQA AAQADSPAHAEYLKLQCDTRMTRERTQYLRGYSID >gi|257257218|gb|ACDX02000021.1| GENE 6 5478 - 8093 3549 871 aa, chain + ## HITS:1 COG:PM1453_1 KEGG:ns NR:ns ## COG: PM1453_1 COG1012 # Protein_GI_number: 15603318 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Pasteurella multocida # 1 460 2 461 461 739 80.0 0 MNASADNVVSPAVAEVNSLVEKGLRSLDEFRKLNQEQIDYIVAKASIAALDKHGVLAMHA VEETGRGVFEDKATKNLFACENVVRRLRDLKTVGVISEDDVTGITEIADPVGVVCGIVPT TNPTSTTIFKSLIALKTRNPIIFSFHPSAQQCSAHAAQIVRDAAIAAGAPENCIQWIEKP SMEGTSALMKHPGVATILATGGNAMVEAAYSCGKPALGVGAGNVPAYVEKTANIQQAAHD IVMSKAFDNGMICASEQAVIADKEIYKELVEEFKSYGVYFANKKEKAMLEDFIFGVTANC ANCGGAKLNSAVVGKPAAWIAEQAGFKVPEKTNIIIAECREVGPNEPLTREKLSPVLAML KADSTEQGLQFAEQMVAFDGLGHSAAIHTADQELAKTFGTRVKALRVIWNSPSTFGGIGD VYNAFLPSLTLGCGSYGKNSVGGNVSAVNLLNIKKVGRRRNNMQWFKVPAKIYFERDSIQ YLQDMKDCEKVMIVTDRSMVDLGFVDKVTHQLHQRKNKVTIQLFTDVEADPSVQTVYKGT DLMRSFQPDTIIALGGGSPMDAAKAMWLFYEQPQVDFEDLVQKFMDIRKRAFRFPELGRK AKFIGIPTTSGTGSEVTPFTVISDGDKKYPIADYSLTPTIAIVDPAFTMTVPAGVTADTG LDVLTHAVEAYVSVLANDFTDGLALQAIKLVFQYLERSYKHGASDPEAREHMHNASTIAG MAFSNAFLGINHSMAHKIGGKYHVPHGRANAILLPHVIRYNGTRPQKTATWPKYNYYKAD LKYQEIARTLGLPCATPAEGVESFARACHELAVNVGIKMSFKEQGIDEKTFIDGRKELAM LSFEDQCTPANPRLALVADMEEILTKAYYGE >gi|257257218|gb|ACDX02000021.1| GENE 7 8316 - 9110 797 264 aa, chain + ## HITS:1 COG:SP1928 KEGG:ns NR:ns ## COG: SP1928 COG3293 # Protein_GI_number: 15901752 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 151 261 12 124 129 85 44.0 8e-17 MKYENLIQRSDREFKRLTGVTPVLFHEMLQITTEAESRKVKSGRPHTLSLADQLLLTLSY LRHYHTQLELAAIYGLSESNVCRTIRKTEDALIRCKRFSLPKHKNPGDHTVLIDVTESPI ERPKKQRQYYSGKKKRHTVKIQVIYGRETEKIISIRTGMGAQHDMRLARRHLTELYPYKI VIADKGYQGLAKTGLQTPKKKSKHHLLNKQDKEANRRLGKLRTVIEHINRKLKIFKILSL PYRNRRKRFGLRANLIAGLINAMG >gi|257257218|gb|ACDX02000021.1| GENE 8 9309 - 9653 449 114 aa, chain + ## HITS:1 COG:NMB0338 KEGG:ns NR:ns ## COG: NMB0338 COG5416 # Protein_GI_number: 15676253 # Func_class: S Function unknown # Function: Uncharacterized integral membrane protein # Organism: Neisseria meningitidis MC58 # 1 104 57 160 160 130 75.0 7e-31 MKLIYTIIKVIILLLFLLLAVINTDSVAFHYLPGQKADLPLIVVLFGAFVIGIVFGMFAL FGRLLSLRSENNRLRAEVKKHAHLSEKDLVAPVSQPPVPQTTTPANQPVQTPKP >gi|257257218|gb|ACDX02000021.1| GENE 9 9666 - 10835 1733 389 aa, chain + ## HITS:1 COG:NMB0339 KEGG:ns NR:ns ## COG: NMB0339 COG2956 # Protein_GI_number: 15676254 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted N-acetylglucosaminyl transferase # Organism: Neisseria meningitidis MC58 # 1 389 1 389 389 692 89.0 0 MDNELWVILLPITLLPVFFAMGWFAARIDMKTVLKQAKSVPAGFYKSLDALVDRNSGRAA RELAEVIDQQPQSYDLNLTLGKLYRQRGENDKAINMHQALLDSPDTVNEKRARVLFELAQ NYQSAGLVDRAEQIFIGLQEGNMAREARQHLLSIYQQDRDWEKAIETAQLLSHDEQTYQF EIAQFYCELAQTALFKSNLDAARYNVQKALDANKKCARANMILGDIETKQGNFPAAVEAY GAIEQQNHAYLSMVGEKLYEAYAAQDKQEEGLNRLIGYMQTFPDLDLINVIYEKALLLKG ESEAAQLAVELVRQKPDLNGVYRLLGLKISDMNPAWKADADMMRSVIGRQLQRSVMYRCR NCHFKSQVFFWHCPACNKWETFTPNKIEV >gi|257257218|gb|ACDX02000021.1| GENE 10 11940 - 14783 2484 947 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|288576293|ref|ZP_05978540.2| ## NR: gi|288576293|ref|ZP_05978540.2| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 947 26 972 972 1362 100.0 0 MRPTQLPATKSKLTPFEAKLLAQAKAAAEKKAAQERAEAAHKAAMAAAEKKAAAEKKAAQ ERAEAAHKIAMAAAEKRLLQRKRLLKKKLKLLIKSLWLPQRKRLPQKKKAAQEKAEAAHK IAMAAAEKKAAAEKKAAQEKAEAAHKIAMAAAEKKAAAEKKAAQERAEAERKAAREKAEA ERVALEQKREIDRKAAIITAREKAEAARKAADAAAKAELAEKNRTEQIKHSTNKPGNHSS TEEEMSKPVKNTVSKTDNPSSDKSHVGKSTLPTQNNAGKVTDLSDDNNNAAQHQNNKSVS PTQPAAEKGTTATAHIHNPAEGKQSESGDYKVYESKQYGRYINVNDFGADPTGKKDSLAA IKAALEAAHKEKAMLFMDGTYYISDQIVIDNNTSGVKGIFGAGMGKTQINFDKAQVGIFN SNTNHDDVRAFAGILVDGQNGKTIADLSVRYTNADFYRKGLSYFGKVNGILVNDADNTLI SKVEVSGANRAGVTFTSTAALMREAGYKLSYKDRVANGSIDDKYDSLPLGENNRIVDSNL HHNRVAGALVSYQKNFLGEGNLLSWNGHQDDGGTGYGIAAAAGSYNYGITYRKNTTDHNY RKGLDVHDGTDVLIENNTLNGDRLYGIAVYNRQFSLDNVKISGNVITQDTSFRLAVDDTP GYDYHMYSGIQVQTNTQRRDLHSKDKGYFDISNNTINNLEVYKDNIQTYGIEFRNHEQKM DYTLNITGNKISGESTKYLMAVINDTYAPQTKEKGIGTSTINISDNIADIGKMKSGAVPF YIEEHHSDVPMHGSVTLNNNAVTVREESGGYAEFAFMRTNAKEYNVTNNTLSLHGRLDNS IVEVRSTGDGKVNANLNMANNTLVTDIKGPIYKTWLRYESDIDVYSNSNTHNEDTLDNVN TKGSNLSLSDVLVSVSKNINTIQDSVYSYQHKTLPVTEDHVHTNGIL >gi|257257218|gb|ACDX02000021.1| GENE 11 14845 - 15639 978 264 aa, chain - ## HITS:1 COG:NMA1963 KEGG:ns NR:ns ## COG: NMA1963 COG0207 # Protein_GI_number: 15794846 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate synthase # Organism: Neisseria meningitidis Z2491 # 1 264 1 264 264 534 93.0 1e-152 MKAYHDLMRHVLENGTDKSDRTGTGTRSVFGYQMRFDLSQGFPLLTTKKLHLRSIIHELL WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVANGKLSCQLYQRSADIFLGVPFNIAS YALLTMMIAQVCGLQAGEFIHTFGDAHLYSNHFEQAKLQLSRDFRALPVMKINPEVKDLF AFKFEDFELEGYDPHPHIKAAVAV >gi|257257218|gb|ACDX02000021.1| GENE 12 16184 - 17521 2304 445 aa, chain + ## HITS:1 COG:NMA1964 KEGG:ns NR:ns ## COG: NMA1964 COG0334 # Protein_GI_number: 15794847 # Func_class: E Amino acid transport and metabolism # Function: Glutamate dehydrogenase/leucine dehydrogenase # Organism: Neisseria meningitidis Z2491 # 1 443 1 443 444 830 92.0 0 MTDLNALFANLKQRNPNQEPFHQAVEEVFMSLGPFLAKNPKYTQQNLLERIVEPERVIMF RVTWVDDKGQVQVNRGYRIQMNSAIGPYKGGLRFHPTVDLGVLKFLAFEQVFKNALTTLP MGGGKGGSDFDPKGKSDAEVMRFCQAFMNELYRHIGPNTDVPAGDIGVGGREIGFLFGQY KKIRNEFASVLTGKGLEWGGSLIRPEATGYGTVYFAQSMLQTRGDSIEGKRVLISGSGNV AQYAAEKAIQLGAKVLTVSDSNGFVLFPDSGMTEDQLAALIELKEVRRERVSTYAKEQGL KYFENQKPWSVAAEVALPCATQNELDEDAAKTLLANGCYVVAEGANMPSTLGAVEQFVKA GILYAPGKASNAGGVATSGLEMSQNAVRLSWSREEVDQRLFDIMHSIHESCLKYGTENGK TNYVNGANIAGFVKVADAMLAQGIV >gi|257257218|gb|ACDX02000021.1| GENE 13 17657 - 19018 1378 453 aa, chain + ## HITS:1 COG:RSc0387 KEGG:ns NR:ns ## COG: RSc0387 COG0612 # Protein_GI_number: 17545106 # Func_class: R General function prediction only # Function: Predicted Zn-dependent peptidases # Organism: Ralstonia solanacearum # 19 439 58 483 501 294 38.0 3e-79 MLSRYVFLSACLLSCATFAQTLSQTLPNGLKIIVKEDRRAPVAVSQIWYKVGSVDEKPGK SGLSHALEHMMFKGTPSVPSGEYSSRIARLGGDDNAYTNRSETVYYANIASANLPEVLKL EADRMHNLNFSDKEFANEMNVIREERRQRTEDDAGGKMWEQIYLNSFTLPSMKASVIGYM EDLHTLRADDLRAWYKQFYAPNNAVLVIVGDVDAKQTLRTAAGLFGKIPRKSLPERNNLK AEPVKRAPSFAQASSPVTRQPLVAISWRVPALSRLDDKLPYALDVLTDVLTGNTSSRLDK NLVRGKQTALSANAHYDLLSREMPLFGVFGMPAENVSAETLLTQMKSEIKDIADNGISKE ELDRIKAQALAGEIYARDSMVSQASLMGRLEARGFKYSDEAAIRRRIQAVTAEEVQKAAQ MLTDDRSSTVIIMPESAPPAPADYTAVKKPEKQ >gi|257257218|gb|ACDX02000021.1| GENE 14 19155 - 20069 1060 304 aa, chain + ## HITS:1 COG:NMA0225 KEGG:ns NR:ns ## COG: NMA0225 COG1752 # Protein_GI_number: 15793247 # Func_class: R General function prediction only # Function: Predicted esterase of the alpha-beta hydrolase superfamily # Organism: Neisseria meningitidis Z2491 # 45 304 41 300 300 400 82.0 1e-111 MKSSFSSVFRTALTISSVLILSACPSNTSPVNPPRHNTQITPPPKPQAVVALALGGGASK GFAHIGIIKALKQNGIPVKIITGTSAGAIVGSLYASGASPDRLELEAEILGSTDLVDLTL STSGFIKGQKLQDYINRKVGNRPIQDFPIKFAAVATDFESSKAVAFNRGNAGQAVRASAA IPNVFQPVLIGGRRYVDGGLTQPVPVSAAKKQGANFIIAVDISDRPSKNLKQGFFSYLDQ SINVMSQSALQHELSQANVVIHPQVLDLGAVGGFSQKQRAIAEGERAAKAAIPEIRRKLA AYRY >gi|257257218|gb|ACDX02000021.1| GENE 15 20406 - 21593 1801 395 aa, chain - ## HITS:1 COG:NMB1803 KEGG:ns NR:ns ## COG: NMB1803 COG0755 # Protein_GI_number: 15677641 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in cytochrome c biogenesis, permease component # Organism: Neisseria meningitidis MC58 # 1 395 1 395 395 572 82.0 1e-163 MTHNHNPLPEHELLTHKSFLKSLNTVDCLFALLTAAGAFFAQTRIQHAMDIYEMVILWAS AGITVFLGWFFKPMRWFAPLCAVLAYGAVMLYDGDITHSDGFLLKYFLSSQSAIMWQCAF IFFALFAYIAGAVLAQRKNVATNTLLGMGSVFAWVSAVAGFTGLLVRWHESYLLRPDAGH IPVSNLYEVFILFLVITALMYLYYEARFAVQKLGGFVFSFMAIVVGFVLWYSFSREAHTI QPLIPALQSWWMKIHVPANFIGYGAFCIAAMLGIAELWALRNENAGKKSSLPPSQVIEEV MYKAIAVGFLFFTIATILGALWAADAWGRYWSWDPKETWAFIVWLNYAVWLHLRLVAGWR GKILAWWAVIGLFVTAFAFIGVNMFLSGLHSYGTL >gi|257257218|gb|ACDX02000021.1| GENE 16 21583 - 23601 2136 672 aa, chain - ## HITS:1 COG:NMB1804 KEGG:ns NR:ns ## COG: NMB1804 COG1333 # Protein_GI_number: 15677642 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ResB protein required for cytochrome c biosynthesis # Organism: Neisseria meningitidis MC58 # 1 671 1 671 671 1144 80.0 0 MSKSSSSVPLIHKPWFAFLSSMRFAVALLSLLGVASVIGTVLQQNQPQVNYVVKFGPFWA QIFNFLGLYDVYASAWFVVIMMFLVISTSLCLIRNVPPFLREIKSFRENAKEKSLAAMRH STVLEGKMSSEIAQRYLEVQGFSCKTVTREDGSVLVAAKKGAMNKWGYIFAHAALIVICL GGLIDSNLLLKIGMLTGRIVPDNHSVYAKDFKPESVLGTSNLSFRGNVNITEGQSADVVF LNADNGMLVQDLPFDVKLKKFHIDFYNTGMPRDFASDLEITDKESGKKSEHTIRVNHPLT LHGITIYQASFADGGSDLKFKAWNLGNPSREPLTLKATSMREFPLDIGNTSYKLEFDQFT SMNVEDMGKSSEKEQTLQSAINDVRAVSQENKKYTNIGPSVVYRIRDKAGQAVEYKNYML PIKQEQDYFFITGTRTGLEQQYRWLRIPADRTSKPDTFMAMRELLKDEAARKAVIRNATL NAPDNIREQFTLAAENTLGIFAKGGYLALDEFITKNIPKEQQEKMQGYFYEMLFGVMNAV LEETIQKYKLPAWPQDEVRNRFLLHSMDAYTGLTEYPAPMLLQLDGFEEVRSSGLQMTRS PGAFLVYLGSVLLVLGTIFMFYIREKRAWVLFSDDHIRFAMSSSRNERDLQKEFPQHTQS LQRLAKDLNHDA >gi|257257218|gb|ACDX02000021.1| GENE 17 23861 - 24487 894 208 aa, chain - ## HITS:1 COG:NMA0658 KEGG:ns NR:ns ## COG: NMA0658 COG2863 # Protein_GI_number: 15793642 # Func_class: C Energy production and conversion # Function: Cytochrome c553 # Organism: Neisseria meningitidis Z2491 # 1 207 1 206 207 318 79.0 3e-87 MKRLTLAALVLAAGAAVAAPKADIAKGKEVATTICAACHAADGNSGIAMYPKLAAQHSAY IYRQTLDIKEGKRTHGSAAVMKPMVMNLSEQDILNVSSFYSKQQPKPGEANPKQNDPVLG GKIYRGGLVDKKIPACMSCHGPSGAGIPGGGTEIVAYPRLGGQHMAYVVDQMKAYKTGQR KNAIMEDIAKRLTEEELNSVANFIQGLH >gi|257257218|gb|ACDX02000021.1| GENE 18 24688 - 25341 843 217 aa, chain + ## HITS:1 COG:NMA0656 KEGG:ns NR:ns ## COG: NMA0656 COG0218 # Protein_GI_number: 15793641 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Neisseria meningitidis Z2491 # 1 196 1 196 209 356 89.0 1e-98 MNLFQNAKFFTTVNHLKDLPDTPAEIAFVGRSNAGKSSAINTLTNHVRLAYVSKTPGRTQ HINFFELSNGSFMVDLPGYGYAQVPEAIRTHWVKLLGDYLQQRRQLIGLVLIMDARHPLK ELDLRMLDFFHITGRPVHILLSKADKLSKNEQIKTLGTVKKSLKPYMTRQRISVQLFSSL KKQGIEEVNQVVGEWFATHQEEIDNLNIENPENSESL >gi|257257218|gb|ACDX02000021.1| GENE 19 25592 - 26029 569 145 aa, chain - ## HITS:1 COG:NMA1983 KEGG:ns NR:ns ## COG: NMA1983 COG0848 # Protein_GI_number: 15794865 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport protein # Organism: Neisseria meningitidis Z2491 # 1 145 1 144 144 218 83.0 2e-57 MAFGSMNSGDDAPMSDINVTPLVDVMLVLLIVFMITMPVLTHSIPLELPTASEKAAKQKE KQPKDPLRLTIDANGSYYVGGDSATKVDIDTVISRLKTEKQENADTIIAIAADKAVEYEY VNKALEAAREAGISKVGFVTETKAQ >gi|257257218|gb|ACDX02000021.1| GENE 20 26033 - 26692 673 219 aa, chain - ## HITS:1 COG:NMA1984 KEGG:ns NR:ns ## COG: NMA1984 COG0811 # Protein_GI_number: 15794866 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport proteins # Organism: Neisseria meningitidis Z2491 # 1 219 1 219 220 332 76.0 3e-91 MDLKLVFESGDFVLISVFVLMLLMSIVTWCLIILRTIKLKKAKSANAEVKTQMLNAFTLS EAVQKVKSIDSPMSRVADESLRAYQSYRQSNAKTLTTELPLNEYLVIQIRNSMEQAMRQF DYGMTALASIGATAPFIGLFGTVWGIYHALINIGQSGQMSIAAVAGPIGEALVSTAAGLF VAIPAVLAYNFLNRGKKTLSQDMDAFAHDLHVRLLNQKD >gi|257257218|gb|ACDX02000021.1| GENE 21 26760 - 27581 424 273 aa, chain - ## HITS:1 COG:NMA1985 KEGG:ns NR:ns ## COG: NMA1985 COG0810 # Protein_GI_number: 15794867 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protein TonB, links inner and outer membranes # Organism: Neisseria meningitidis Z2491 # 4 272 41 279 280 80 43.0 3e-15 MMNIEFVDLADLGGDGGGDGSPEGEGAPAAPEKTPEPEKPKLRPKPKPVEPPKPIIKPVV TKKEDADIQQPKEKPKPVEKPKPEPKPEPKPEPRPEPKPEPKTESKPAPQASEYTGTKTG PNTAENGKGSGEGKALHGEGKGSGGGTKGTGSGRGEGSGSGSGGAKGEHGSGTGSGGGTG GGGGSGGPPAIVDKGFLPTPAYPPLSLENGEEGIVHLSILVQPGGKVVKVTVTKSSGFQR LDNAARKAATAAGSRYPTNRLTEYRGKINFQLQ >gi|257257218|gb|ACDX02000021.1| GENE 22 28197 - 28661 573 154 aa, chain - ## HITS:1 COG:NMA2048 KEGG:ns NR:ns ## COG: NMA2048 COG1959 # Protein_GI_number: 15794926 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Neisseria meningitidis Z2491 # 1 147 1 147 147 257 82.0 6e-69 MYLTQHTDYGLRVLIYAAVNDDSLVNIGTIAEAYNISKSHLMKVVTALVKGGFLTSTRGK GGGLRLADTPDKINVGAVVRHLEPMQIVECMGENNECLITPSCRLAGILGGAIKAFFAHL DGFTLQDLLNKPTYDLLYEPKIEIIAEKVNGKTA >gi|257257218|gb|ACDX02000021.1| GENE 23 28831 - 29211 303 126 aa, chain + ## HITS:1 COG:no KEGG:NLA_4810 NR:ns ## KEGG: NLA_4810 # Name: not_defined # Def: hypothetical protein # Organism: N.lactamica # Pathway: not_defined # 1 121 2 122 130 158 74.0 5e-38 MKPLKRHPALIELSREHHHALSLCVRLLRTPAESHQTELEAHFLELEPHFAEEEVMFAPY WQNIPAAMRERFEKEHAKLRGMMANPKYLNEEWNKDFAVTLRDHARFEERELFPAVEPFL PPPEGI >gi|257257218|gb|ACDX02000021.1| GENE 24 29324 - 30481 1166 385 aa, chain + ## HITS:1 COG:NMA2046 KEGG:ns NR:ns ## COG: NMA2046 COG3213 # Protein_GI_number: 15794924 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in response to NO # Organism: Neisseria meningitidis Z2491 # 4 385 19 400 400 567 88.0 1e-161 MTAFFKHPVWAMAFRPFYSLAALYGALSILLWGFGYTGTPELRGFYWHAHEMIWGYAGLV VIAFLLTAVATWTGQPPTRGGVLVGLTAFWLAARIAVFIPGWGATASGILGTLFFWYGAV CMALPVIRSKNKRNYVAVFAIVVLGCTHAAFHFQLHAGNAAALLSGLQSGLIMVAGFIGL IGMRIISFFTSKRLNVPQIPSPVWVAHASLWLPMLTAMLMAHQALPWLSSAFAFAAGVIF TVQVYRWWYKAVLKEPMLWILFAGYLFTGLGLIAVGASYFHTPFLNLGVHLIGVGGIGVL TLGMMARTALGHTGNSIYPPPKSVPIAFWLMIASTVIRMVAIFVGGTGYVHSIRTSSVLF ALALLLYAWKYIPWLIRPRADGKPG >gi|257257218|gb|ACDX02000021.1| GENE 25 30821 - 34108 2497 1095 aa, chain - ## HITS:1 COG:NMA0609 KEGG:ns NR:ns ## COG: NMA0609 COG3419 # Protein_GI_number: 15793599 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, tip-associated adhesin PilY1 # Organism: Neisseria meningitidis Z2491 # 429 1095 405 1037 1037 338 36.0 4e-92 MKNNLSRFPGTVRPMIYSIASALALMGAASQAQAQFAKTPLYLQNESQIIEQPKIKHNIM FFIDDSQSMNRNAVTGEYTPGPTRMQVTKNALNGILENHKDKFNWGLQTLYNGGSSDTTP EETFDPEKASWQKMIDKVNKMKPTGLTPATSRYYEVVTQTVMPNIKYRCQKSYVVMMSDG DANFGCNFHSKGFSYNFDYDNPKGYYSIYPSPYRPFLPKNEAAYKYFGPSALAGLSQTTL SGLCSKAGGVDNMPYWDSADGYNGKVGGIEFFSRTLSWKDIKTAADGNGKDAAGVSWDGD PSKDPKGVDYSKQLVQTFTVGFGQGISDAGKAFLTRGASQDDWYFNADKPEDLENAFNKI ISLISTDSESPPFEGEGGTAPATSSSGIPDLAATIKLNTGSWSSQILFNKLNAKGRRVGT DTDTDNGPKPSFGNRKTLINTGSNTYALENIINNPPEYINNAYFGIESSNKDEWKKLLNW TGRVGSNDNAYSPYRPRNPGERDLGDILDGSVAAVGNQENGRRKYFVAAANDGMVHIFQS TAGEHPYDLKVSYLPSAMERENDASGNPITLAKVLKDIAHTDYGRSIENHKYGVNGGFTL RQTAAVEQGSKFQQRVFMFGAMGQGGRGAYALNIGGKEDQTTNTGLDAAAWSDKVPLFET PKGAANELGYTVGTPQIGRVSISRPANNGRVDVSKNIRYAGFLASGYRAEDTADKQNETA LYIYEMLGKEVGTGDKRGEDAGKAGNLLKKIKVESGVGGLSTPTLLDIDFDGVVDIAYAG DRGGNMYRFDLRGEKPDNWMVTKIFTGSPSKPITSAPAVSRRSANKYVVIFGTGSEIYQN DLVNKDIQSIYGIYEDLTPSEEDLPQNQNVTAASESDLQQQEILPDKEGQEGYIYLTNNQ VTKTQKGWRINLREGERVSLKPTMILRTAIVTIRKYTSDGGKTIGKEEAEKDLCLPVSNN KSTETSTTFLGINADNGGALNNRSARFTPDIFKRELSGFGTQYANGLTLEGIIASFTFID PNKRTDDPVTADGDSGGTGTDKELGYGSGTPNNKCFSGKEDDHRSLLLNKKDKGSLEVKG RICGLQRISWRELFF >gi|257257218|gb|ACDX02000021.1| GENE 26 34332 - 34730 624 132 aa, chain + ## HITS:1 COG:NMA1217 KEGG:ns NR:ns ## COG: NMA1217 COG3039 # Protein_GI_number: 15794159 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS5 family # Organism: Neisseria meningitidis Z2491 # 1 132 1 132 294 265 96.0 1e-71 MSTFFRQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQRTRYLRDHRGRPAYPLLSM FKAVLLGQWHSLSDPELEHSLITRIDFNLFCRFDELSIPDYSTLCRYRNWLAQDNTLSEL LELINRQLTEKA Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:17:18 2011 Seq name: gi|257257217|gb|ACDX02000022.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont21.1, whole genome shotgun sequence Length of sequence - 30611 bp Number of predicted genes - 30, with homology - 28 Number of transcription units - 19, operones - 7 average op.length - 2.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) - 5S_RRNA 135 - 191 91.0 # AE015927 [R:2797299..2798807] # 5S ribosomal RNA # Clostridium tetani E88 # Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium. - Term 626 - 673 15.2 1 1 Op 1 . - CDS 716 - 1132 781 ## COG1734 DnaK suppressor protein - Prom 1176 - 1235 4.7 2 1 Op 2 . - CDS 1326 - 1880 558 ## gi|261365679|ref|ZP_05978562.1| hypothetical protein NEIMUCOT_06210 3 1 Op 3 . - CDS 1883 - 2680 942 ## COG0345 Pyrroline-5-carboxylate reductase 4 1 Op 4 . - CDS 2771 - 3109 223 ## NMO_1955 hypothetical protein 5 1 Op 5 . - CDS 3175 - 3870 637 ## COG0325 Predicted enzyme with a TIM-barrel fold - Prom 3904 - 3963 7.1 + Prom 3894 - 3953 5.6 6 2 Op 1 6/0.200 + CDS 4050 - 5096 1618 ## COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT + Prom 5189 - 5248 2.3 7 2 Op 2 . + CDS 5268 - 6500 1971 ## COG5008 Tfp pilus assembly protein, ATPase PilU + Term 6525 - 6577 13.1 8 3 Tu 1 . + CDS 6928 - 7377 412 ## NMA1494 hypothetical protein 9 4 Tu 1 . + CDS 7876 - 8412 942 ## HAPS_1396 outer membrane protein 18/16 + Term 8431 - 8479 13.2 - Term 8419 - 8466 14.6 10 5 Tu 1 . - CDS 8605 - 9141 194 ## PROTEIN SUPPORTED gi|167856514|ref|ZP_02479226.1| 50S ribosomal protein L1 - Prom 9286 - 9345 5.2 - Term 9744 - 9781 8.0 11 6 Tu 1 . - CDS 9805 - 12438 4061 ## COG0249 Mismatch repair ATPase (MutS family) - Prom 12461 - 12520 4.4 - Term 12468 - 12515 14.2 12 7 Op 1 28/0.000 - CDS 12543 - 13460 1402 ## COG2177 Cell division protein 13 7 Op 2 2/0.400 - CDS 13457 - 14107 311 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) - Prom 14203 - 14262 6.5 14 8 Tu 1 . - CDS 14441 - 14923 688 ## COG0526 Thiol-disulfide isomerase and thioredoxins - Prom 14950 - 15009 5.0 + Prom 14909 - 14968 3.3 15 9 Op 1 2/0.400 + CDS 15112 - 15471 617 ## COG1393 Arsenate reductase and related proteins, glutaredoxin family 16 9 Op 2 . + CDS 15494 - 16168 971 ## COG1434 Uncharacterized conserved protein + Term 16181 - 16226 13.2 - Term 16518 - 16548 0.0 17 10 Tu 1 . - CDS 16572 - 17156 959 ## COG0632 Holliday junction resolvasome, DNA-binding subunit - Prom 17230 - 17289 3.0 - Term 17174 - 17232 5.2 18 11 Tu 1 . - CDS 17348 - 18712 2033 ## COG0486 Predicted GTPase - Prom 18897 - 18956 3.2 19 12 Tu 1 . + CDS 19424 - 20602 1859 ## COG0126 3-phosphoglycerate kinase + Term 20613 - 20679 25.2 - Term 20609 - 20661 17.3 20 13 Op 1 . - CDS 20678 - 21094 480 ## HMPREF0733_11830 hypothetical protein 21 13 Op 2 22/0.000 - CDS 21131 - 22027 1406 ## COG0142 Geranylgeranyl pyrophosphate synthase 22 13 Op 3 . - CDS 22011 - 22235 328 ## COG1722 Exonuclease VII small subunit - Prom 22264 - 22323 2.9 - Term 22295 - 22346 17.1 23 14 Tu 1 . - CDS 22372 - 22968 714 ## gi|261365700|ref|ZP_05978583.1| conserved hypothetical protein + Prom 22772 - 22831 3.2 24 15 Tu 1 . + CDS 23041 - 23955 969 ## + Term 24033 - 24063 -1.0 25 16 Tu 1 . - CDS 24410 - 24724 60 ## - Prom 24860 - 24919 3.0 + Prom 24846 - 24905 4.0 26 17 Tu 1 . + CDS 24990 - 26447 1701 ## COG3104 Dipeptide/tripeptide permease + Term 26475 - 26514 9.3 - Term 26454 - 26512 21.5 27 18 Op 1 . - CDS 26544 - 27011 296 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase - Prom 27038 - 27097 3.3 - Term 27064 - 27114 9.3 28 18 Op 2 . - CDS 27151 - 29166 2119 ## COG1505 Serine proteases of the peptidase family S9A - Prom 29195 - 29254 5.0 29 19 Op 1 . - CDS 29470 - 30156 637 ## gi|261365705|ref|ZP_05978588.1| hypothetical protein NEIMUCOT_06250 30 19 Op 2 . - CDS 30143 - 30463 431 ## COG3293 Transposase and inactivated derivatives - Prom 30509 - 30568 2.3 Predicted protein(s) >gi|257257217|gb|ACDX02000022.1| GENE 1 716 - 1132 781 138 aa, chain - ## HITS:1 COG:NMB0056 KEGG:ns NR:ns ## COG: NMB0056 COG1734 # Protein_GI_number: 15675994 # Func_class: T Signal transduction mechanisms # Function: DnaK suppressor protein # Organism: Neisseria meningitidis MC58 # 1 138 1 138 138 224 93.0 4e-59 MAKLTEQDILNWDGPEEDYMNSDQLAFFRELLVKMQDELIENASATTGHLQEHESAPDPA DRATQEEEYALELRTRDRERKLLGKVQATIRSIDEGEYGFCADTGEPIGLKRLLARPTAT LSVEAQERRERMKKQFAD >gi|257257217|gb|ACDX02000022.1| GENE 2 1326 - 1880 558 184 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261365679|ref|ZP_05978562.1| ## NR: gi|261365679|ref|ZP_05978562.1| hypothetical protein NEIMUCOT_06210 [Neisseria mucosa ATCC 25996] hypothetical protein NEIMUCOT_06210 [Neisseria mucosa ATCC 25996] # 1 184 1 184 184 285 100.0 9e-76 MRGDLLILLADGIVILCLARLFLQAAGLSENHALLAFSKRSTDWLVKPLHKILPVKKYDP ACLLSGLLLYYIVFTFITLVAQPTAFSVKIIIANFILAVLNTIKSAAYVLLIGLFIRMAL SIKDPYSQLSVALERIYRPILSPVQFLKYGRYDFSGSILALLLWIWLSSLSPQITRQINL WLLQ >gi|257257217|gb|ACDX02000022.1| GENE 3 1883 - 2680 942 265 aa, chain - ## HITS:1 COG:NMA0215 KEGG:ns NR:ns ## COG: NMA0215 COG0345 # Protein_GI_number: 15793238 # Func_class: E Amino acid transport and metabolism # Function: Pyrroline-5-carboxylate reductase # Organism: Neisseria meningitidis Z2491 # 1 263 1 263 263 403 81.0 1e-112 MNIYFLGGGNMAAAIAGGLVKQGGYRIHIANRGAEKRERLAKELNVEVSESLPELFSDDV LILAVKPQDMEAACRNVRVNGALVLSVAAGLSIDTLSRYLGGTRRIVRTMPNTPGKIGLG VSGMFTEAEVSEADRAAADRIMRSVGLTVWLDEEDKLHNITGISGSGPAYVFYLLSALQA AAQAQGFSEEDARALSLATFKGAVALAEQSGEDFAQLQQNVTSKGGTTHEAIETFKSCHV AEAIAQGVEACVKRSQEMAQQYKVV >gi|257257217|gb|ACDX02000022.1| GENE 4 2771 - 3109 223 112 aa, chain - ## HITS:1 COG:no KEGG:NMO_1955 NR:ns ## KEGG: NMO_1955 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 2 112 26 135 135 151 67.0 8e-36 MGWYQCESLSGWCKPKKPAAIDFWEIKGEPPPSIEDYRATRFVDGSYSVDDNAYRTADND YFSRKIKKFEACGLAWHTRDKNPLAETFKQEGLDCLEKQGLYRTSLPESVRW >gi|257257217|gb|ACDX02000022.1| GENE 5 3175 - 3870 637 231 aa, chain - ## HITS:1 COG:NMA0217 KEGG:ns NR:ns ## COG: NMA0217 COG0325 # Protein_GI_number: 15793240 # Func_class: R General function prediction only # Function: Predicted enzyme with a TIM-barrel fold # Organism: Neisseria meningitidis Z2491 # 1 227 1 227 228 358 80.0 4e-99 MSVLQQNYAEVKRRIAEAEQKAGWQVGEVGLIAVSKTFPSDDIREVYAAGQRDFGENYIQ EWYEKTETLADLPDIVWHVIGDVQSNKTKFVAERAHWVHTIGRLKTARRLSEQRPSEMPP LQVCIEVNIAGEEAKHGVAPDEAVALGVEVAKLPNVVVRGLMCVAKAGSSEAELRHQFQA MQQLLADLNAAGVDADVLSMGMSDDMPVAVACGATHVRIGSAIFGRREQKG >gi|257257217|gb|ACDX02000022.1| GENE 6 4050 - 5096 1618 348 aa, chain + ## HITS:1 COG:NMB0052 KEGG:ns NR:ns ## COG: NMB0052 COG2805 # Protein_GI_number: 15675990 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, pilus retraction ATPase PilT # Organism: Neisseria meningitidis MC58 # 1 346 1 346 347 582 88.0 1e-166 MQITDLLAFGVKNKASDLHLSAGMSPMIRVHGDIRRINLPEMSAEEVGNMVTSVMNDHQR KLFQQDLEVDFSFELPNVARFRVNAFTSNRGPAAVFRTIPSDVLTLEDLRAPRIFQKIAD NPRGLVLVTGPTGSGKSTTLAAMINYINETQPAHILTIEDPIEFVHQSKKALVNQRELHQ HTHSFANALRSALREDPDVILVGEMRDPETIGLALTAAETGHLVFGTLHTTGAAKTVDRI VDVFPAGEKEMVRSMLSESLRAVISQTLLKTRDGNGRVAAHEILISTPAVRNLIRENKIA QINSALQTGQAHGMQTLDQALQTLVRQGTISPDVARSKAQNSDNMNIV >gi|257257217|gb|ACDX02000022.1| GENE 7 5268 - 6500 1971 410 aa, chain + ## HITS:1 COG:NMB0051 KEGG:ns NR:ns ## COG: NMB0051 COG5008 # Protein_GI_number: 15675989 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, ATPase PilU # Organism: Neisseria meningitidis MC58 # 4 410 3 408 408 566 68.0 1e-161 MSETTPLHDLLSEMVQAYSQKNQPPHIPTPAEIGTHLHPLLDRMCVEAEKRGASDIFISA GFPPAVKVSGTLTPVPHKALTGEDTAAIVESTMNPEQLETFNREWELNYSVQSRSNTRYR VNAYHEQGRVGMVLRRINQEIPEMESLGLPAKLKDLSLSPRGLLILAGPTGSGKSTTMAS MLDYRNHKMPGHIVTIEDPIEFIYKPRRSIFTQREVGIDTNDWKIAVQSAMRQAPDVVCI GEVRSEASMEYALQLAQTGHLCVFTIHANTAAQTIERIINFYQEDRRKQVLMDLALNLTG IIGQRLAIKKNRSQRTAVVDLLLNTPAMQDLIFKGELMEIRELMTRSGTDGMQTFDQHLF ELYIKGQIEYDEALRQAVSTNDLRLRIQMHEEGNDPDRLYDRISDLNLIS >gi|257257217|gb|ACDX02000022.1| GENE 8 6928 - 7377 412 149 aa, chain + ## HITS:1 COG:no KEGG:NMA1494 NR:ns ## KEGG: NMA1494 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_A # Pathway: not_defined # 10 142 14 139 146 103 48.0 2e-21 MNRLCALLTSLWLGMQVMAGYIAAPILFGQLGKQEAGNIAGVLFSINNYFGLLAWIVAWL VVRSNRNRSLSDNGKVAPKFIILLLLLTASNQFLISPVIAAHKAGTANWLLSLLGGSFGM WHGISSIIYLVCSVSGLGLLWRYLKFENN >gi|257257217|gb|ACDX02000022.1| GENE 9 7876 - 8412 942 178 aa, chain + ## HITS:1 COG:no KEGG:HAPS_1396 NR:ns ## KEGG: HAPS_1396 # Name: not_defined # Def: outer membrane protein 18/16 # Organism: H.parasuis # Pathway: not_defined # 22 177 22 170 170 73 30.0 3e-12 MKKTLLTVLLATASAITFADGSFTGAGLEVGAGATKSDVRNVNLNEKTKGDVAVRGSYNT QFGQSNWIGGVEAGVKPLHRKIAGNAKQKVDANVSYVQGYRFNDDVMAYGKVGYHYGRFD NLGAKRNNMNGLGYGVGAKYAIAPNVEVGAEWEQTRYKKDDLKVHNNSYMATVGYRFK >gi|257257217|gb|ACDX02000022.1| GENE 10 8605 - 9141 194 178 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167856514|ref|ZP_02479226.1| 50S ribosomal protein L1 [Haemophilus parasuis 29755] # 9 176 16 175 175 79 30 3e-14 MKHIFPTILTATLIPFLASCGFSSGKHRPTAKTHASARKVQPVRISNIDHTQGSQELMLH SMGLIGTPYKWGGSTTSTGFDCSGMIQFVYKNALGVSLPRTARDMAAASRKIPDGHLKAG DLVFFNTGGANKYSHVGLYIGNGEFIHAPSSGKTIKTEKLSSPFYAKNYLGAHTFFTD >gi|257257217|gb|ACDX02000022.1| GENE 11 9805 - 12438 4061 877 aa, chain - ## HITS:1 COG:NMB2160 KEGG:ns NR:ns ## COG: NMB2160 COG0249 # Protein_GI_number: 15677973 # Func_class: L Replication, recombination and repair # Function: Mismatch repair ATPase (MutS family) # Organism: Neisseria meningitidis MC58 # 1 873 1 863 864 1366 83.0 0 MSKSAISPMMQQYLAIKSQHADKLVFYRMGDFYELFLDDAVEAAKLLDITLTTRGQMDGV PIKMAGVPFHAAEQYLARLVKMGKSVAVCEQVGEVGAGKGPVERKVVRIVTPGTLTDAAF LEDKETNRIAAVNADKKHIAIAWASLQSGEFKTKLTTADKLADELARLQAAEILLPEGKS LSDGFQTTSANITRLNSWQFAADAGAKLLTEYFGCQDLHGFGLDGKEHEAAVGAAGALLN YIRLTQNLMPQHLDGISLETDSQYIGMDAATRRNLEITQTLSGKKSPTLFSILDGCATHM GSRLLALWLHHPLRSRAHIRARQEAVAALGSQYEALQGRLKNIADIERIAARIAVGNARP RDLAALRDSLFALSEIELSAEGSSLLETLKAVFPETLPVAETLKAAVMPEPAVWLKDGGV INQGYCAELDELRHIQNHGDEFLLELEARERERTGLSTLKVEFNRVHGFYIELSKVQAEQ APADYQRRQTLKNAERFITPELKTFEDKVLTAQEQALALEKRLFEALLKDIQTTLPQLQK AAKAAAALDVLSTFAATAAERGFVCPEFADYPVIHIENGRHPVVEQQVRHFTANHTRLDH KHRLMLLTGPNMGGKSTYMRQVAHIVLMAHTGSFVPADAAQIGPIDQIFTRIGASDDLAS NRSTFMVEMSETAYILHHATDQSLVLMDEVGRGTSTFDGLALAHAIAEHLLQKNKSFSLF ATHYFELTKLPEAYATAVNMHLSALEQGQDIVFLHHIEPGPASKSYGIAVAKLAGLPNRA LKAAQKHLDELEAQAAAVRPQLDIFSTLSSENEYSGFSQDETADTEAQTAENQETNPAHN ALAEALNQIRPDDLTPREALDALYRLKQIVEGVEGGE >gi|257257217|gb|ACDX02000022.1| GENE 12 12543 - 13460 1402 305 aa, chain - ## HITS:1 COG:NMA0255 KEGG:ns NR:ns ## COG: NMA0255 COG2177 # Protein_GI_number: 15793273 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division protein # Organism: Neisseria meningitidis Z2491 # 1 305 1 305 305 536 89.0 1e-152 MSIIHYVSLHVESARTALKQLLRQPVGTLLTLLMLAVAMTLPLFMYLGIQSGQSVLGKLN ESPQITLYMETDASKADSDTVRNLLERDARLNKIRFISKQEGLEELQSNLDQNLVSMLDG NPLPDAFIVTPDPATPPAQMQAIYQDMVKLPMVESATMDTEWVQTLYQINEFIRKILWFL SLTLGMAFVLVAHNTIRLQILSRKEEIEITKLLGAPASFIRRPFLYQAMWQSIFSATVSL GLCGWLLSAVRPLVDAIFKPYGLNIGWRFFHFSEVSLVFGFVIALGVFGAWLATTQHLLG FRAKK >gi|257257217|gb|ACDX02000022.1| GENE 13 13457 - 14107 311 216 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 1 208 4 214 223 124 34 7e-28 MIRFEQVSKTYPGGFEALKNVSFQIKKGEMIFIAGHSGSGKSTILKLISGITKPSKGKVW FNNQDLGELSDNQIGFMRQHIGIVFQDHKILYDRNVLQNVILPLRIIGYQPRKAEERARI AIEKVGLKGRELDDPVTLSGGEQQRLCIARAVVHQPSLLIADEPSANLDRAYALDIMELF KTFHEAGTTVIVAAHDETLMADYGHRILRLSKGRLA >gi|257257217|gb|ACDX02000022.1| GENE 14 14441 - 14923 688 160 aa, chain - ## HITS:1 COG:NMB0006 KEGG:ns NR:ns ## COG: NMB0006 COG0526 # Protein_GI_number: 15675954 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Neisseria meningitidis MC58 # 1 160 1 160 160 257 80.0 5e-69 MKKLLLASVLMTAALSAPAFAADPLAGWNDNKPQSLQSLKAPVRVVNLWATWCGPCRKEM PAMSAWYKAQKKGSVDMVGIALDTSDNIGKFLKQTPVSYHVWRYTGADSRNFMKSYGNNV GVLPFTVVEAPKCGYKQTITGEVNEKSLTAAVNAAKEKCK >gi|257257217|gb|ACDX02000022.1| GENE 15 15112 - 15471 617 119 aa, chain + ## HITS:1 COG:NMA0252 KEGG:ns NR:ns ## COG: NMA0252 COG1393 # Protein_GI_number: 15793270 # Func_class: P Inorganic ion transport and metabolism # Function: Arsenate reductase and related proteins, glutaredoxin family # Organism: Neisseria meningitidis Z2491 # 4 118 3 117 117 170 78.0 6e-43 MSSEFTLYHNPRCSKSRAAFDLLEARGIKAEVVKYLDTPPDLATLKDIFAKLGLESVRGM MRVKDDLYKELGLDNPNLNNQALLEAIAAHPALLERPILTTQDKAAIGRPIENIEALLD >gi|257257217|gb|ACDX02000022.1| GENE 16 15494 - 16168 971 224 aa, chain + ## HITS:1 COG:NMA0251 KEGG:ns NR:ns ## COG: NMA0251 COG1434 # Protein_GI_number: 15793269 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 4 216 5 217 218 313 71.0 2e-85 MISLFRSRNGLRYYLFRGIGLSILLILGIFSVGAWQVYHTGSQPLPRHVRADAALVLGAA AWDKRPSPVFRERINHAITLYQSHRVEKIVFTGGTSKKGYMTEAEVGRRYALKQGIPAHN IIFENTSRNTYENIRNIRPILRAEGIESIIIVSDPYHLARALEIASDLDIEAYVSATPTT RFDQGKEKNKFLLQESYALFLYRIGKWSENFWDWLTVRETKEEA >gi|257257217|gb|ACDX02000022.1| GENE 17 16572 - 17156 959 194 aa, chain - ## HITS:1 COG:NMB0265 KEGG:ns NR:ns ## COG: NMB0265 COG0632 # Protein_GI_number: 15676189 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, DNA-binding subunit # Organism: Neisseria meningitidis MC58 # 1 194 1 194 194 315 85.0 3e-86 MISRLTGRLIEKNPPQIVIDVNGVGYEADVSMQTFYNLPALGETVQLYTQLVVREDAHLL FGFATADERATFRQLVKVSGIGAKTALGILSAMSADELARAVADEDIKRLSSAPGIGKKT AERMVLELRGKLVSHATADGLFAATPAADETDDIVNTLIALGYNEREAKAAIKGIPKGTE VGEGVRLALKNLLK >gi|257257217|gb|ACDX02000022.1| GENE 18 17348 - 18712 2033 454 aa, chain - ## HITS:1 COG:NMB1987 KEGG:ns NR:ns ## COG: NMB1987 COG0486 # Protein_GI_number: 15677815 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Neisseria meningitidis MC58 # 1 454 1 448 448 659 79.0 0 MSASQPTIAAIATAPGRGGVGVIRLSGKNLLPLAQTLSGGKTPKPRTALYTDFLGGDGQP IDNGILLYFAAPASFTGEDVIELQGHGGPVVMDMLLSRCLELGARMAEPGEFTKRAFLNN KLDLAQAESVADLIDASSKSAARMALRSLKGAFSQHIHELVDDLITLRMLVEATLDFPEE DIDFLEAADARGKLQALQGRLKTVLASAEQGAILREGMNVVLVGAPNVGKSSLLNALAGD DIAIVTDIAGTTRDTVREQITLDGVPVHIIDTAGLRETDDVVEQIGIERSRKAVSEADVA LILIDPREGLNAKTQAILNSLPEGLKKIEIHNKADLTGEPVAVRSDGLAQTGADTVISLS AKTGAGLDLLKHALLQEVGWQGESESLFLARSRHLNALHEAEAELENAALCDNNQIELFA EHLRLAQNACSEITGEFTADDLLGVIFSRFCIGK >gi|257257217|gb|ACDX02000022.1| GENE 19 19424 - 20602 1859 392 aa, chain + ## HITS:1 COG:NMB0010 KEGG:ns NR:ns ## COG: NMB0010 COG0126 # Protein_GI_number: 15675958 # Func_class: G Carbohydrate transport and metabolism # Function: 3-phosphoglycerate kinase # Organism: Neisseria meningitidis MC58 # 1 392 1 403 403 645 94.0 0 MAFLKLTEQNVQGKTVLIRADMNVPFKDGKISDDTRIRASLASIKYCLDNGASVIVMTHL GRPTEGEFHPEDDVAPVAAHLGGLLGKDVKVLNDWCENKPALNAGDVVMLQNVRINKGEK KNDLELGKAYAALCDVFVNDAFGTAHRAQASTEAVAQAAPVACAGVLMAGELDALGKALK EPARPMVAIVAGSKVSTKLTILESLADKVDQLIVGGGIANTFLLAEGKAIGKSLAEHDLV EESKKIMAKMAAKGGSVPLPTDVVVAKAFAADSEAVVKDIADVAEDDMILDIGPKSAAAL AELLKAAGTVVWNGPVGVFEFDQFAGGTKALAEAIAQSKAFSIAGGGDTLAAIAKFGVTD QIGYISTGGGAFLEFLEGKELPAVAALEKRGA >gi|257257217|gb|ACDX02000022.1| GENE 20 20678 - 21094 480 138 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0733_11830 NR:ns ## KEGG: HMPREF0733_11830 # Name: not_defined # Def: hypothetical protein # Organism: R.dentocariosa # Pathway: not_defined # 1 135 39 173 175 174 63.0 8e-43 MNDFERIYNDWHEFAKNRDTARLIGLYDDNAVFESPLVPLIMQRQSGILSGKADILAFLE EGTRRRPNELVRWYRNGTHFTTGDTLVWEYPRETPDGDQVDILELMQIAGGKIVHHRIYW GWFGTQMLIRSALNRAAE >gi|257257217|gb|ACDX02000022.1| GENE 21 21131 - 22027 1406 298 aa, chain - ## HITS:1 COG:NMA2226 KEGG:ns NR:ns ## COG: NMA2226 COG0142 # Protein_GI_number: 15795095 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Neisseria meningitidis Z2491 # 1 297 1 297 298 426 82.0 1e-119 MNPANELKAWQQKAQAQTELLLERFLPSENQVPHTLHEAMRYVTLGGGKRLRPLLVLAAS ELGDADQNAVEQAMAAIEMVHVYSLVHDDMPAMDNDSLRRGKPTCHVKYDEATALLVGDA LQTQAFDVLSRPTGLPAEHQIAMLSTLAKASGSLGMAGGQAIDLANVGKAMNQAQLEQMH SLKTGALIRAAVVLGALACPDLDSDDVRTLDDYAAKLGLAFQVIDDVLDCEADTATLGKT AGKDSDNDKPTYVKLMGLQAARAYAESLTAEAAALLEPFGAKALHLRLLAEFVTARKN >gi|257257217|gb|ACDX02000022.1| GENE 22 22011 - 22235 328 74 aa, chain - ## HITS:1 COG:NMB0262 KEGG:ns NR:ns ## COG: NMB0262 COG1722 # Protein_GI_number: 15676186 # Func_class: L Replication, recombination and repair # Function: Exonuclease VII small subunit # Organism: Neisseria meningitidis MC58 # 2 74 3 74 74 80 83.0 5e-16 MKKAPKSFEAALARLETLTQSMQSSEMPLEDALAAYQEGNELVRYCQTKLAEVEQKLQVL DAGELKELNLEPGE >gi|257257217|gb|ACDX02000022.1| GENE 23 22372 - 22968 714 198 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261365700|ref|ZP_05978583.1| ## NR: gi|261365700|ref|ZP_05978583.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 198 10 207 207 369 100.0 1e-100 MLSIDGADNKVINRVGNPDVLEVNGQKINLLPQTFDAANGMLSLSDNKIIRAIGTHLQYG HYGFYGSKKENGELNSSLVFYQGLMTPVEAMPQTGSAIYQGNAFYNDVSNINTVGSSLFN VDFGEKTLTGGVYSAEGRFNPVMLQANIAGNRFVYVDATTKNSMSGIFLGPQAEEMAGRF DHPSEGKSGTFGAAMLKD >gi|257257217|gb|ACDX02000022.1| GENE 24 23041 - 23955 969 304 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLCFSFSGFFRSFALGFGFSFGGFFGSFALGFSFSFGGFFSGLAFFFSFNFCSFLSSFTF SFGFSFSSLFGRFTFGFSFSFGSLFGRFTFGFSFGFGSFFRSFSFRLSLGFSFGSFFGSF ALGFSFGFSGFFCRFTFRFSLGFCSFLRQSLRSASALALALAASSASFTFRFGFSFSGFF SGFALGFSFSFGSFLSRFAFSFSFGFSGFFSGFTLGFSFGFGSFFSGFTFFFSGFTFFFS FRFCSFFSGFALGFGFSFGSFLSRFTFFFSFGFCSFFSDFSFSFGFVVAIRFYVLILVFR RRLC >gi|257257217|gb|ACDX02000022.1| GENE 25 24410 - 24724 60 104 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MHSSNLPERSASSVNAFCLVLLRMGFSLLRLVTKCTVRSYRTFSPLPVPPEGGRRRYCFL FHFPSRFRARPLAGILLCGARTFLPVCLTRYAATVCPTCMKCGL >gi|257257217|gb|ACDX02000022.1| GENE 26 24990 - 26447 1701 485 aa, chain + ## HITS:1 COG:NMB2136 KEGG:ns NR:ns ## COG: NMB2136 COG3104 # Protein_GI_number: 15677949 # Func_class: E Amino acid transport and metabolism # Function: Dipeptide/tripeptide permease # Organism: Neisseria meningitidis MC58 # 1 485 1 485 485 681 76.0 0 MSDNYSARKGKTFFGHPIQLSTLFHIELWERFSFYGMQGILLIYLYYTADKGGLGMDKSL AGGIVGAYGGSVYLSTILGAWLADRIWGAEKTLFISGIVVMLGHIVLAIAPGLYGLLCGL VLIALGSGGVKSSASSMVGSLYETDELKPLRDAGFSIFYISINIGGFFGPLLTGLLQTEM GFHYGFGAAAVGMAFGLWRYSVGRKLLPHTPAPNPLRPEKVKTAVAVGVLIVLVVGSLIA SDTLNLDNFSKFLLGTVILTVIAYFARLLGSSHVSSENKRYITAYIPLFLTICLFWAVWF QVYTVATVYFDETVDRTLGNWTVPVAWKDSIQSMWVVLFSGVMAAIWTKMGRHQPKTPLK FALAMLVVGVSYLGFVPYISSGTPMPIIVFALILLAITIGELMISPISLSISTKIAPPMF KTQMVALNFLGLSLGFTLGGVLFKEGFNDKAPLDFYWMLCGIGVITGAVLLLLVPVLNRM LKGAD >gi|257257217|gb|ACDX02000022.1| GENE 27 26544 - 27011 296 155 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 1 150 749 898 904 118 44 4e-26 MTALQTIAEHLTRRRQTVTCAESCTGGLLAGAFTSIAGSSQWFHQSFVTYSNQAKEERLG VMPDTLLQHGAVSRETVYEMARGAKAVAQADYALSISGIAGPGGGSAAKPVGTVWFGLST PTESLEQMKIFSGDREAVRNQAVAFALEFLAEHLV >gi|257257217|gb|ACDX02000022.1| GENE 28 27151 - 29166 2119 671 aa, chain - ## HITS:1 COG:NMA0579 KEGG:ns NR:ns ## COG: NMA0579 COG1505 # Protein_GI_number: 15793570 # Func_class: E Amino acid transport and metabolism # Function: Serine proteases of the peptidase family S9A # Organism: Neisseria meningitidis Z2491 # 1 671 1 671 671 1320 94.0 0 MKSYPDSYLHFENLDSPETLNFAAEAHSETRARFLDNDKARALSDGILAQMQDTRQIPFC QEHRARMYHFHQDAEYPKGVYRVCTAATYRSGYPEWKILFSVADFDGLLGDDVYLGGVSH LVEQPNRALLTLSKSGGDTAYTLEVDLEAGGLVEGGFHFPAGKNHVSWRDENSVWVCPAW DERQLTESGYPREVWLVERGKSFEESLPVYQIGEDGMMVNAWRYLDPQGSPIDLIEASDG FYTKTYLQVSSEGEAKPLNLPADCDVVGYLAGHLLLTLRKDWHRANQSYPSGALVAVKLN RGELGAAQLLFAPDETQALESVETTKRFVVASLLENVQGRLKAWRFADGKWQEAELPRLP SGALEMTDQPWGGDVVYLAASDFTTPLTLFALDLNVMELTVMRRQPQQFVSDDIEVRQFW AVSSDGERIPYFHVGKNAAPDTPTLVYAYGGFGVPELPHYLGSIGKYWLEEGNAFVLANI RGGGEFGPRWHQAAQGISKHKSVDDLLAVVRDLSERGMSSPKHIGLQGGSNGGLITAAAF VREPQSIGALVCEVPLTDMIRYPLLSAGASWTDEYGNPQKYEVCKRWLGELSPYHNLSDG VPYPPALITTSLSDDRVHPAHALKFYAKLRETSAQSWLYAPDGGGHTGNGTQRESADELA CVLLFLKEFLG >gi|257257217|gb|ACDX02000022.1| GENE 29 29470 - 30156 637 228 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261365705|ref|ZP_05978588.1| ## NR: gi|261365705|ref|ZP_05978588.1| hypothetical protein NEIMUCOT_06250 [Neisseria mucosa ATCC 25996] hypothetical protein NEIMUCOT_06250 [Neisseria mucosa ATCC 25996] # 1 228 1 228 228 425 100.0 1e-117 MQWDEYFRKRSNKNGNWLKNADVSVPFRSLSEKSGQDSDGLPEAGFSDDEYEKLPLYQVA YIAYKDEYIAEKKCGIWFPSQEEPKFGIRLKPVGNEKWHQFRLKKLKEALEELIGFFKDK SAVSDDDKEALEYIRYLFKDFAFRDEEEFRLLVIKPIDSEEIEYCETTQSIYIPYADIRN QADEVILGTNYEKTGNQRKAEVFRYRMKEKCPDVKVSRSTLPINPPNK >gi|257257217|gb|ACDX02000022.1| GENE 30 30143 - 30463 431 106 aa, chain - ## HITS:1 COG:SP1928 KEGG:ns NR:ns ## COG: SP1928 COG3293 # Protein_GI_number: 15901752 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 5 103 24 124 129 81 47.0 3e-16 MGAQHDMRLARRHLTELYPYKIVIADKGYQGLAKTGLQTPKKKSKHHLLNKQDKEANRRL GKLRTVIEHINRKLKIFKILSLPYRNRRKRFGLRANLIAGLINAMG Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:18:33 2011 Seq name: gi|257257215|gb|ACDX02000023.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont22.1, whole genome shotgun sequence Length of sequence - 30269 bp Number of predicted genes - 29, with homology - 29 Number of transcription units - 19, operones - 7 average op.length - 2.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 171 - 470 360 ## COG0815 Apolipoprotein N-acyltransferase + Term 477 - 516 1.8 2 2 Op 1 . - CDS 533 - 853 422 ## COG3293 Transposase and inactivated derivatives 3 2 Op 2 . - CDS 909 - 1328 401 ## Aasi_1471 hypothetical protein 4 2 Op 3 . - CDS 1346 - 1999 343 ## COG1357 Uncharacterized low-complexity proteins - Prom 2020 - 2079 1.5 - Term 2005 - 2044 0.2 5 3 Tu 1 . - CDS 2162 - 3373 1264 ## COG3385 FOG: Transposase and inactivated derivatives - Prom 3403 - 3462 3.4 6 4 Tu 1 . - CDS 3756 - 5963 3219 ## COG0210 Superfamily I DNA and RNA helicases - Prom 5989 - 6048 3.7 + Prom 6028 - 6087 2.4 7 5 Tu 1 . + CDS 6108 - 6800 744 ## COG1451 Predicted metal-dependent hydrolase + Term 6975 - 7024 10.1 - Term 6963 - 7012 10.1 8 6 Tu 1 . - CDS 7037 - 8110 1392 ## COG0628 Predicted permease - Prom 8335 - 8394 3.3 + Prom 8072 - 8131 6.5 9 7 Tu 1 . + CDS 8351 - 8665 489 ## gi|261365715|ref|ZP_05978598.1| acid shock protein + Term 8776 - 8814 9.5 - Term 8764 - 8802 9.5 10 8 Tu 1 . - CDS 8819 - 10051 1112 ## COG0477 Permeases of the major facilitator superfamily - Prom 10114 - 10173 6.6 + Prom 10086 - 10145 5.9 11 9 Op 1 . + CDS 10265 - 10729 641 ## Sked_15040 hypothetical protein 12 9 Op 2 4/0.000 + CDS 10687 - 11304 943 ## COG0241 Histidinol phosphatase and related phosphatases + Prom 11527 - 11586 2.9 13 9 Op 3 . + CDS 11629 - 12381 1240 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase + Term 12387 - 12428 10.6 - Term 12422 - 12455 6.1 14 10 Op 1 41/0.000 - CDS 12485 - 14119 2080 ## PROTEIN SUPPORTED gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 15 10 Op 2 . - CDS 14216 - 14503 443 ## COG0234 Co-chaperonin GroES (HSP10) + Prom 14827 - 14886 11.8 16 11 Op 1 2/0.000 + CDS 14932 - 17100 3035 ## COG1629 Outer membrane receptor proteins, mostly Fe transport + Term 17242 - 17266 -1.0 + Prom 17183 - 17242 3.5 17 11 Op 2 . + CDS 17313 - 18272 1206 ## COG4607 ABC-type enterochelin transport system, periplasmic component + Term 18292 - 18340 12.3 - Term 18280 - 18328 12.3 18 12 Tu 1 . - CDS 18348 - 19031 1099 ## COG0588 Phosphoglycerate mutase 1 - Prom 19063 - 19122 4.0 + Prom 19131 - 19190 6.1 19 13 Op 1 . + CDS 19216 - 19788 582 ## COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase + Prom 19806 - 19865 4.5 20 13 Op 2 . + CDS 19889 - 21181 1853 ## COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase + Term 21212 - 21251 9.3 + Prom 21251 - 21310 7.1 21 14 Tu 1 . + CDS 21491 - 23005 2304 ## COG0753 Catalase + Term 23147 - 23199 16.1 - Term 23503 - 23555 15.1 22 15 Tu 1 . - CDS 23577 - 25415 2759 ## COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains - Prom 25506 - 25565 4.8 - Term 25436 - 25477 5.1 23 16 Op 1 . - CDS 25683 - 26780 1177 ## COG1985 Pyrimidine reductase, riboflavin biosynthesis 24 16 Op 2 . - CDS 26851 - 27381 652 ## gi|288576335|ref|ZP_05978614.2| conserved hypothetical protein 25 16 Op 3 . - CDS 27422 - 27883 480 ## COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains - Prom 27909 - 27968 4.5 26 17 Op 1 2/0.000 - CDS 28027 - 28869 1361 ## COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase - Term 28893 - 28954 8.6 27 17 Op 2 . - CDS 28957 - 29340 731 ## COG0853 Aspartate 1-decarboxylase - Prom 29398 - 29457 3.3 28 18 Tu 1 . - CDS 29474 - 29797 533 ## COG1324 Uncharacterized protein involved in tolerance to divalent cations - Prom 29888 - 29947 4.5 + Prom 29772 - 29831 2.9 29 19 Tu 1 . + CDS 29888 - 30238 383 ## NLA_8450 transposase Predicted protein(s) >gi|257257215|gb|ACDX02000023.1| GENE 1 171 - 470 360 99 aa, chain + ## HITS:1 COG:NMB0713 KEGG:ns NR:ns ## COG: NMB0713 COG0815 # Protein_GI_number: 15676611 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Apolipoprotein N-acyltransferase # Organism: Neisseria meningitidis MC58 # 1 97 426 522 524 161 76.0 3e-40 MAWYGDSNAMYQQLQQSQARAMELGRYMVRATNTGATAIISPKGSIIAESEPNTDAVLEG HVKGYVGETPYMKAGGSLWLIGVLSIIAITLFLIRKKAD >gi|257257215|gb|ACDX02000023.1| GENE 2 533 - 853 422 106 aa, chain - ## HITS:1 COG:SP1928 KEGG:ns NR:ns ## COG: SP1928 COG3293 # Protein_GI_number: 15901752 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 5 103 24 124 129 81 47.0 3e-16 MGAQHDMRLARRHLTELYPYKIVIADKGYQGLAKTGLQTPKKKSKHHLLNKQDKEANRRL GKLRTVIEHINRKLKIFKILSLPYRNRRKRFGLRANLIAGLINAMG >gi|257257215|gb|ACDX02000023.1| GENE 3 909 - 1328 401 139 aa, chain - ## HITS:1 COG:no KEGG:Aasi_1471 NR:ns ## KEGG: Aasi_1471 # Name: not_defined # Def: hypothetical protein # Organism: A.asiaticus # Pathway: not_defined # 1 129 13 147 157 96 45.0 3e-19 MKYENLIQRSDREFKRLTGVTPVLFHEMLQITTEAESRKVKSGRPHTLSLADQLLLTLSY LRHYHTQLELAAIYGLSESNVCRTIRKTEDALIRCKRFSLPKHKNPGDHTVIIDVTESPI ERPKKTAAVLQRQEKAAHG >gi|257257215|gb|ACDX02000023.1| GENE 4 1346 - 1999 343 217 aa, chain - ## HITS:1 COG:slr1819 KEGG:ns NR:ns ## COG: slr1819 COG1357 # Protein_GI_number: 16330348 # Func_class: S Function unknown # Function: Uncharacterized low-complexity proteins # Organism: Synechocystis # 43 199 161 330 331 79 35.0 6e-15 MITINLEKIMERTYKKIDMDTAVSMLKDHQLWLSSGGKEGKQAVFTGYDLSGLDSDYAEA RYVVPPFWEKDLSKIDLSYSNLSGLYFRDVNLSQADFRGANLKNTHFYWAILFDADFSGA DISEANIEESSLVQANLTKADLFKTGITYSYLENANLQDANCQETNFRNTQLQGANLHGA NFHSADFGGATIEENQLIHIRFAENIDFDIRPLAKVS >gi|257257215|gb|ACDX02000023.1| GENE 5 2162 - 3373 1264 403 aa, chain - ## HITS:1 COG:SMb20766 KEGG:ns NR:ns ## COG: SMb20766 COG3385 # Protein_GI_number: 16265206 # Func_class: L Replication, recombination and repair # Function: FOG: Transposase and inactivated derivatives # Organism: Sinorhizobium meliloti # 2 350 3 331 387 259 40.0 9e-69 MYSISRFQQIIKPIMHGRFQKHVQQHQADKYSKGFNCHSLLISMVYAHLTHCNSLRTLEQ SFNAHSHHHYHLNLCRRIRHSTLSEALAKRDTRPFTDMLRELMATCSRTLRKHTQDTADL LYLLDSTPIILKGRGFNQWVSSNGRISGLKVHVLMNHANGCPTVQSITEASVNDIDQRHI VQPEKGATYVFDKGYCDYNWWAELDRAGAYFVTRLKANAAVEVIEQFSPSETQNAHENSR NDNKNTPILTDEYIRFKHKSNSTRPNHYHNKTLRRITVEREGTEALVLVSNNLTASAQEI AENYKRRWQIELLFKWLKQHLKLKRFLGRSANAVKLQLLCAMMAYLLLKLYQQCTTHSND SLHLLCARIAGGLFEREKTMYGHYADIRRERREWIDRVQGRLI >gi|257257215|gb|ACDX02000023.1| GENE 6 3756 - 5963 3219 735 aa, chain - ## HITS:1 COG:NMA0027 KEGG:ns NR:ns ## COG: NMA0027 COG0210 # Protein_GI_number: 15793060 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Neisseria meningitidis Z2491 # 1 735 1 735 735 1424 96.0 0 MFPDQSAPNLLQGLNLEQLSAVTWPPQSALVLAGAGSGKTRVLTTRIAWLLQTGQASVHS IMAVTFTNKAAKEMQTRLGAMIPINVRAMWLGTFHGLCHRFLRLHHRDAGLPSSFQILDS GDQLSLIKRLLKSLNIAEEIIAPRSLQGFINAQKESGLRASVLSAPDPHTSRMIECYAEY DKICQREGVVDFAELMLRSYEILQSNEILRQHYQNRFNHILVDEFQDTNKLQYAWLKLMA GGNAAVFAVGDDDQSIYRFRGAHVGNMTALMEEFHIDAPVKLEQNYRSVGNILTAANAVI ENNDERLGKNLRTDAEAGDKIRYYSAFTDLEEAQFIVDETKALEREGWDLDEIAVLYRSN AQSRVIEQSLFRSGIPYKIYGGLRFYERQEIKHALAYLRLAVNPDDDNALLRVINFPPRG IGARTIENLQTASNEQGITLWQAACNAGAKAAKVAAFVRLIEALRNQVGQMPLPEIIVGI LKDSGLTEHYKTQKGDNQDRLDNLDELVNAAIEFKPEDSNFEILPDNISDDPAFPILAFL SNAALESGENQAGAGEKAVQLMTVHAAKGLEFNAVFLTGMEEGRFPSEYSLTERGGLEEE RRLMYVAITRARKRLYITMAQQRMLHGQTQFGIVSRFVEEIPPEVLHYLSVKKTAYDSYG SPRQTATFKDKIIEDFKQPQTYAGFRIGQNVRHAKFGTGVIIDAVDKGESARLTINFGKQ GVKELDTKFAKLEEM >gi|257257215|gb|ACDX02000023.1| GENE 7 6108 - 6800 744 230 aa, chain + ## HITS:1 COG:NMA0032 KEGG:ns NR:ns ## COG: NMA0032 COG1451 # Protein_GI_number: 15793065 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Neisseria meningitidis Z2491 # 1 230 1 230 230 419 93.0 1e-117 MTRLLHTLADGTQITIELKRSAKKNLILRPVNMQTVSINVPRFFQDHALANWLAANETIL RNTLAKTPVHPVSHPNLPEWIWYRGVKTKLDTHSQSHIRITSSEILLPRKETAAQIDHLR RLLNERAREYLLPRLKKHAAETGLTPAATALSNAKTFWGVCRPHTGIRLNWRLIGAPEYV ADYVCIHELCHLRHPDHSRRFWHLVNTLTPHTDNAKSWLKAHGRELFVLG >gi|257257215|gb|ACDX02000023.1| GENE 8 7037 - 8110 1392 357 aa, chain - ## HITS:1 COG:RSp0411 KEGG:ns NR:ns ## COG: RSp0411 COG0628 # Protein_GI_number: 17548632 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Ralstonia solanacearum # 16 357 16 340 341 196 38.0 4e-50 MALHSMIFEHSRFRNASYILMGLALFVVLYFHFLPLLLAVILTYVFITKTNGLILWLRRR TLARNTFLHKSLNAHNINLISTTLTIGIVLTVILLMSLGIYHLIHGGHIPVMLTKLAAIL EDTKNSSSLPQSVLNMLPNNTAEIKAYAVKLIEEYSAALTRISKNSFTSFVYILIGIIIG AMLSFHRLNMRKNRRKMPPFKAELVRRIVNFETSFERVFLAQVKISLIDTTLTGVYLYLI LPLFGVELPFKITVLVIAFIVGLIPVAGNLISNTIIIILSLGASLYVAVASLVFLVVIHK LEYFLNAKIIGSEIESSAWELLVAMVVFERIFGVGGIIVAPVYYAYLKNELKQQKLI >gi|257257215|gb|ACDX02000023.1| GENE 9 8351 - 8665 489 104 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261365715|ref|ZP_05978598.1| ## NR: gi|261365715|ref|ZP_05978598.1| acid shock protein [Neisseria mucosa ATCC 25996] acid shock protein [Neisseria mucosa ATCC 25996] # 1 104 1 104 104 71 100.0 2e-11 MKTLSKLTSLVLVSAGLIAAPVAMAQPASGKAATKAGHVHKKANKAKKQANDLKQDKAAE AATTEATSTDAEVKAMGEQGQAATQTAPAADLEQAPANQTPAAK >gi|257257215|gb|ACDX02000023.1| GENE 10 8819 - 10051 1112 410 aa, chain - ## HITS:1 COG:NMA2040 KEGG:ns NR:ns ## COG: NMA2040 COG0477 # Protein_GI_number: 15794920 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Neisseria meningitidis Z2491 # 9 410 9 410 410 568 78.0 1e-162 MSQSTPSPLGEKQMAVLMAMLVALMPFSVDAYLPAIPEMAQSLSVDIHRIEQSLVLFMFG VAFGQVVGGAVSDIKGRKPVALVGLSIYFTAVAALTMVQSVDGLLNLRAVQAFGAGMTVV IVGAMVRDYYSGRQAAQMFALIGIILMLVPLIAPMVGSLLQELGGWRFIFGFLAAYSFVL FILVFAFLPRPKHTGKIGMDIFGLVAGRFARVLKTRAAMGYLFFQAFSFASMFAFLTESS FVYQKLYHVTPREYAWVFALNILTMASFNRITAWRLKTGAHPQSILKWGIIVQFVANLTM VLLVLLLGLPPMWALVPCVMFSVGTQGLVGANTQACFMTYFKQESGSANAVLGVFQSIIG ASVGLLATRLHNGSALVMAGMMLASTVCGIVLLWLCSHQAWKENDKSEYV >gi|257257215|gb|ACDX02000023.1| GENE 11 10265 - 10729 641 154 aa, chain + ## HITS:1 COG:no KEGG:Sked_15040 NR:ns ## KEGG: Sked_15040 # Name: not_defined # Def: hypothetical protein # Organism: S.keddieii # Pathway: not_defined # 2 149 3 148 151 74 32.0 1e-12 MYDNIRFHLDEEYPEGLPSENAATHIGMYWIWAAQTGLANPVWQTAPESAEDFANMLKGR TSGRRFLLKHMDGALTPDDFTEQGRQFTSYYYDDEEDGYGAFLEDYVRTLDTPSLGGFYH VPNTPETYKRLKPVFQAAFEQWKNNLESPVGEQP >gi|257257215|gb|ACDX02000023.1| GENE 12 10687 - 11304 943 205 aa, chain + ## HITS:1 COG:NMA0405 KEGG:ns NR:ns ## COG: NMA0405 COG0241 # Protein_GI_number: 15793412 # Func_class: E Amino acid transport and metabolism # Function: Histidinol phosphatase and related phosphatases # Organism: Neisseria meningitidis Z2491 # 14 200 1 187 187 319 80.0 2e-87 MEKQFGIPCRRATVKLIILDRDGVINQDRDDFVKSVDEWIPIEGSMDAIAFLTQAGYNIA IATNQSGIGRKYFTVQDLTEMHAKMHRLVRQAGGEIDGIWFCPHTAADNCDCRKPKPGMV YDILERFKANPAETWLVGDSLRDLQAMHEAGGKTALVLTGKGKKTLSQQEKELPENTQVF DNLLAFSQYITYETAQDRTDGQAKP >gi|257257215|gb|ACDX02000023.1| GENE 13 11629 - 12381 1240 250 aa, chain + ## HITS:1 COG:NMA0404 KEGG:ns NR:ns ## COG: NMA0404 COG0204 # Protein_GI_number: 15793411 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Neisseria meningitidis Z2491 # 1 247 1 247 247 415 79.0 1e-116 MLLIRNLTYWFILSTSLILLFPFILLALPVQGGAHKMAQIWVRILNWSLKHIIGLKYHLI GAENIPDRPSIICAKHQSGWETLALQEIFPPQVYVAKRELFKIPFFGWGLKLVKTIGIDR SNSREANKQLMEQGMARKNEGYWITIFPEGTRLPPGEKGRYKLGGARMAKMFEMDIVPVS LNSGEFWPKNAFLKHPGTITVVIHPVIPHGSGTEAELMAECEKRIETQQPLIEGKGPFAA KNRKATASPS >gi|257257215|gb|ACDX02000023.1| GENE 14 12485 - 14119 2080 544 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 [Haemophilus parasuis 29755] # 1 544 1 547 547 805 75 0.0 MAAKDVQFGNEVRQKMVSGVNTLANAVRVTLGPKGRNVVVDRAFGGPHITKDGVTVAKEI ELKDKFENMGAQMVKEVASKTNDVAGDGTTTATVLAQAIVAEGMKYVTAGMNPTDLKRGI DKAVAALVEELKNIAKPCDTSKEIAQVGSISANSDEQVGAIIAEAMEKVGKEGVITVEDG KSLENELDVVEGMQFDRGYLSPYFINDAEKQIAALDNPFVLLFDKKISNIRDLLPVLEQV AKASRPLLIIAEDVEGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLQDIAILTGGTV IAEEVGLSLEKATLEDLGQAKRIEIGKENTTIIDGFGDAAQIEARVAEIRQQIETATSDY DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALL RARAALENLHTGNADQDAGVQIVLRAVESPLRQIVANAGGEPSVVVNKVLEGKGNYGYNA GSGEYGDMIEMGVLDPAKVTRSALQHAASIAGLMLTTDCMIAEIPEEKPAMPDMGGMGGM GGMM >gi|257257215|gb|ACDX02000023.1| GENE 15 14216 - 14503 443 95 aa, chain - ## HITS:1 COG:NMA0472 KEGG:ns NR:ns ## COG: NMA0472 COG0234 # Protein_GI_number: 15793473 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Co-chaperonin GroES (HSP10) # Organism: Neisseria meningitidis Z2491 # 1 95 1 95 96 156 98.0 8e-39 MTIRPLHDRVVVKRLEAEEKTASGIVLPGAAAEKPDMGEVIAVGAGKIGKDGARRPLDVK VGDKVIFGKYSGQTVKADGEELLVMREEDIFGIVE >gi|257257215|gb|ACDX02000023.1| GENE 16 14932 - 17100 3035 722 aa, chain + ## HITS:1 COG:NMA0453 KEGG:ns NR:ns ## COG: NMA0453 COG1629 # Protein_GI_number: 15793456 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Neisseria meningitidis Z2491 # 1 722 1 714 714 1191 86.0 0 MTSPLFRFSLLSMALAAGFAHAENEAKESVTLDTVTVKGDRQGSKVKTNIVTLRQKDEST STDLRELLKEEPAIDFGGGNGTSQHMTLRGMGQNSVDIKVDNAYSDSQILYHQGRFIVDP ALVKVVSVQKGAGSASAGIGATNGAIIAKTVDAQDLLKGLDKNWGVRLSSGYASNDGVNY GASVFGKAGNFDGLFSYNRNDEKDYEAGKGYKSPNGGKTVPYSALDKRSYLAKIGTTFGD GDHRIVLSHMKDQHRGIRTVREEFTIFESDPAKDRQKPSYRETTQSNTNLEYTGKNLGFV EKLNANAYVLENERYSADDSGSGYAGNVVGPNHTRIATRGANFNFDSRLAEQTLLKYGIN YRHQEIEPQAFLNNEFKISGKKPDPKDPKKEIDKTDEEKAKDKKVMDLVHSYKLSNPTKT DTGAYIEAIHEINGFTLTGGLRYDRFKVKTHDGKTVSSSSLNPSFGVIWQPHEHWSFSAS HNYASRSPRLYDALQTHGKRGIISIADGTKAERARNTEIGFNYNDGTFAANGSYFWQTIK DALANPQNRHDSVAIREAVNAGYIKNHGYELGASYRTGGLTAKVGVSHSKPRFYDTHKDK LLSANPEFGAQTGRTWTASLAYRFQNPNLEIGWRGRYVQKAVGSILVAGQKGRDGKLENV VRQGFGVNDVFANWKPLGKDTLNINLSVNNVFNKFYYPHSQRWTNTLPGTGRDVRLGVNY RF >gi|257257215|gb|ACDX02000023.1| GENE 17 17313 - 18272 1206 319 aa, chain + ## HITS:1 COG:NMB1989 KEGG:ns NR:ns ## COG: NMB1989 COG4607 # Protein_GI_number: 15677817 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type enterochelin transport system, periplasmic component # Organism: Neisseria meningitidis MC58 # 1 319 1 321 321 539 91.0 1e-153 MLRLTALAVCCALALGACSPKDSASNQNAQTASAAQTEGADLTVKTTRGDAKVPQNPERI AVYDLGMLDTLNKLGVKTGLSVDKNRLPYLDEYFKTTKPAGTLFEPDYEALNAYKPQLII IGSRAAKAFDKLNAIAPTIEMTADTANLKESAKERIDALAQIFGKQAEADKLKAEIDASF DAAKTAAQGKGKGLVILVNGGKMSAFGPSSRLGGWLHKDIGVPAVDEAIKEGSHGQPVSF EYLKEKNPDWLFVLDRSAAIGEEGQAAKDVLNNPLVAETTAWKKGQVVYLVPETYLAAGG AQELLNASKQVTDAFNAAK >gi|257257215|gb|ACDX02000023.1| GENE 18 18348 - 19031 1099 227 aa, chain - ## HITS:1 COG:NMB1604 KEGG:ns NR:ns ## COG: NMB1604 COG0588 # Protein_GI_number: 15677454 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglycerate mutase 1 # Organism: Neisseria meningitidis MC58 # 1 227 1 227 227 439 95.0 1e-123 MELVFIRHGQSEWNAKNLFTGWRDVKLSEQGLAEAAAAGKKLKEKGYEFDIAFTSVLTRA IKTCNIVLEESDQLFVPQIKSWRLNERHYGQLQGLDKKQTAEKYGDEQVHIWRRSYDTLP PLLDPKDPFSAHNDRRYANLPADVVPDGENLKVTLERVLPFWEDQIAPALLSGKRVLVAA HGNSLRALAKHIEGISDEDIMGLEIPTGQPLVYKLDDNLKVVEKFYL >gi|257257215|gb|ACDX02000023.1| GENE 19 19216 - 19788 582 190 aa, chain + ## HITS:1 COG:NMB1945 KEGG:ns NR:ns ## COG: NMB1945 COG0163 # Protein_GI_number: 15677775 # Func_class: H Coenzyme transport and metabolism # Function: 3-polyprenyl-4-hydroxybenzoate decarboxylase # Organism: Neisseria meningitidis MC58 # 1 188 2 189 190 297 78.0 8e-81 MTRRLIIGISGASGFQYGIKALALLRAHDVETHLVVSKSAEMTRALETPYEKDELYRLAD VVHPINHIGSAIASGSFKTDGMLIAPCSMRTLAAVANGFGDNLLTRAADVVLKERRRLVL MVREAPLNLAHLDNMRRVTEMGGIVFPPTPALYQQPQTIDDIITHSTAHALSLLGFDTGT VPEWTGGASS >gi|257257215|gb|ACDX02000023.1| GENE 20 19889 - 21181 1853 430 aa, chain + ## HITS:1 COG:NMB1823 KEGG:ns NR:ns ## COG: NMB1823 COG3977 # Protein_GI_number: 15677659 # Func_class: E Amino acid transport and metabolism # Function: Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase # Organism: Neisseria meningitidis MC58 # 1 428 1 428 430 825 92.0 0 MQFSAFGEKFTQHSGILQLMDDLGDALKSDKPVNMLGGGNPARIAEVNAVFADVFSKLAA EHAVENIGNYSNPQGDAALIDALTAFLNREYGWNLTADNIALTNGSQNAFFYLFNLFGGK FKVSGDLSVEKAILLPLAPEYIGYADVHVEGQHFVSVKPKIEAVEHEGESGFFKYRVDFD ALESLPELKEGKIGAICCSRPTNPTGNVLTDGEMARLDALAQEHGIPLIIDNAYGMPFPN IIYSDVTLNWHENIILCFSLSKVGLPGVRTGIIVAAPEVVKAVSSLNAIVNLSPTRFGAA IATPLLQDGRLKQLSDDVIRPFYRNQAQTAVSLLKRELGAYPLKIHKPEGAIFLWLWFEN LPVSSQTLYEMLKAEGTLIIPGEHFFVGIDTQDYPHARECIRMSIAQDAQTLEKGIAAIG RVVRGLYDAA >gi|257257215|gb|ACDX02000023.1| GENE 21 21491 - 23005 2304 504 aa, chain + ## HITS:1 COG:NMA0050 KEGG:ns NR:ns ## COG: NMA0050 COG0753 # Protein_GI_number: 15793081 # Func_class: P Inorganic ion transport and metabolism # Function: Catalase # Organism: Neisseria meningitidis Z2491 # 1 504 1 504 504 1011 97.0 0 MTISKCPVTHLTMNNGAPVADNQNSLTAGPRGPLLAQDLWLNEKLADFVREVIPERRMHA KGSGAFGTFTVTHDITKYTRAKIFSEVGKQTEMFARFTTVAGERGAADAERDIRGFALKF YTEEGNWDMVGNNTPVFFLRDPRKFPDLNKAVKRDPRTNMRSATNNWDFWTLLPEALHQV TIVMSDRGIPASYRHMHGFGSHTYSFWNEAGERFWVKFHFRTQQGIKNLTDKEAAKIIGD DRESHQRDLYEAIERGEFPKWTMFIQVMPEADAEKVPYHPFDLTKVWPKKDYPLIEVGEF ELNRNPENFFADVEQSAFAPSNLVPGIGASPDKMLQARLFNYADAQRYRLGVNFRQIPVN RPRCPVHSNQRDGQGRADGNYGSLPHYEPNSFAQWQEQPDFAEPPLKINGDAAHWDYRQD DDDYFSQPRALFNLMNDAQKQALFDNTAAAMGDAPDFIKYRHIRNCHRCDPAYGEGVAKA LGLTVEDAQAARATDPALGQPGLL >gi|257257215|gb|ACDX02000023.1| GENE 22 23577 - 25415 2759 612 aa, chain - ## HITS:1 COG:NMA0276 KEGG:ns NR:ns ## COG: NMA0276 COG0449 # Protein_GI_number: 15793294 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains # Organism: Neisseria meningitidis Z2491 # 1 612 1 612 612 1078 89.0 0 MCGIVGAIRANHNVVDFLTDGLKRLEYRGYDSSGIAVNADGKIKRVRRVGRVQLMEDAAR EKGVFGHIGIGHTRWATHGGVTEPNAHPHISGGMIAVVHNGIIENFEAERERLKALGYTF ESQTDTEVIAHSVNHEYTQNGGKLFEAVRAATARFHGAYAIAVMAQDKPEEMVVARMGCP LLVALGDQETFIASDVSAVIAFTRRIAYLEDGDIAVLSANGIEKLIDKTGADTQRKVKVS ELSLASLELGPYSHFMQKEIHEQPRAIADTAEVFLDGGFEPENFGANAREVFDDIRSIKI LACGTSYYAALTAKYWLESIAKIPTDVEIASEYRYRDVIADPKQLVITISQSGETLDTME ALKYAQSLGHKHSLSICNVMESALPRESELVLYTRAGAEIGVASTKAFTTQLVVLFGLAV TLGKQRGFVSTEKAREYVEELRQLPGSIQHALNLEPQIAAWAQKFAKKNSALFLGRGIHF PIALEGALKLKEITYIHAEAYPAGELKHGPLALVDENMPVVVIAPNDGLLDKVKANMQEV GARGGELFVFADLDSNFNATDGVHVIRAPRHVGVLSPIVHTIPVQLLSYHAALARGTDVD KPRNLAKSVTVE >gi|257257215|gb|ACDX02000023.1| GENE 23 25683 - 26780 1177 365 aa, chain - ## HITS:1 COG:NMA0644_2 KEGG:ns NR:ns ## COG: NMA0644_2 COG1985 # Protein_GI_number: 15793630 # Func_class: H Coenzyme transport and metabolism # Function: Pyrimidine reductase, riboflavin biosynthesis # Organism: Neisseria meningitidis Z2491 # 147 364 1 218 223 283 66.0 3e-76 MFDCIDTQMMQNALALARLGRFSTSPNPRVGCVIAHGGQIVGQGFHVKAGEPHAEVHALR QAGEMARGATAYVTLEPCSHYGRTPPCAEALISSGVSRVVAAMTDPNPLVAGKGLAMLEA AGIRTESGLLEAEARELNRGFLSRIERGRPFVRIKCAASLDGKTALADGRSYWITGEAAR ADVQTLRAESCAVLTGIGTVLADNPRLNVRAFPTLRQPARIVLDSKLQTPLGSHMVSDDL SPTVIVTAVDDEERLKPYRAFHHIRILRSSENAAGRIDLAALLPQLAELGYGEIMVEAGA TLTSAFIEAGLADEIVLYQAPKILGEGRSLLTLPANPAVLTSEGEWESRSVELIGQDVKW VLRKK >gi|257257215|gb|ACDX02000023.1| GENE 24 26851 - 27381 652 176 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|288576335|ref|ZP_05978614.2| ## NR: gi|288576335|ref|ZP_05978614.2| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 176 7 182 182 307 100.0 3e-82 MKRILSVAAALFCLAACSPEQGDAVSKAASDTVQTLTSMDGKISISVHNSHFTDIIADST RHPKNVPASSLILLQHDPEARITIYAANNGPAQTDAKAYFAELKIALQSDETQNVRVGIA TDNRMNYQTDREDRQGKFNQYCIAIHEANIYTVCAYSHHAGQKELSEVLKELSLSR >gi|257257215|gb|ACDX02000023.1| GENE 25 27422 - 27883 480 153 aa, chain - ## HITS:1 COG:VC2272 KEGG:ns NR:ns ## COG: VC2272 COG1327 # Protein_GI_number: 15642270 # Func_class: K Transcription # Function: Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains # Organism: Vibrio cholerae # 1 147 8 154 156 157 49.0 7e-39 MKCPFCQHPNTQVTDSRLLEETNSIRRRRRCVECGQRFSTFETVEMRMPQVIKSNGTRVA FNPHKLKTSLERALHKRPIAQEKIDETVALIEQRLYQSGKKEVPSRMVGEMAMEELAKID QVAYVRFASVYKSFNDVSEFTQAIATLVQTDGK >gi|257257215|gb|ACDX02000023.1| GENE 26 28027 - 28869 1361 280 aa, chain - ## HITS:1 COG:NMB1283 KEGG:ns NR:ns ## COG: NMB1283 COG2877 # Protein_GI_number: 15677150 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase # Organism: Neisseria meningitidis MC58 # 1 273 1 273 280 479 82.0 1e-135 MNIRINNLTVGNDLPFTLFGGINVLEDLDSTLKACEQYVKVTDKLGIPYVFKASFDKANR SSIHSFRGVGLDEGMKIFQAVKREFNVPVITDVHEPYQCAPVAEVCDVIQLPAFLARQTD LVVAMAKTGNVINIKKPQFLSPSQMKNIVEKFQEAGNGQIILCERGANFGYDNLVVDMLG FGVMKQTCGGLPVIFDVTHSLQTRESGAAASGGRRAQVLDLALAGMATRLAGLFLESHPN PDQAKCDGPSALPLAQLEDFLTRVKAVDETVKSFAPMDIR >gi|257257215|gb|ACDX02000023.1| GENE 27 28957 - 29340 731 127 aa, chain - ## HITS:1 COG:NMB1282 KEGG:ns NR:ns ## COG: NMB1282 COG0853 # Protein_GI_number: 15677149 # Func_class: H Coenzyme transport and metabolism # Function: Aspartate 1-decarboxylase # Organism: Neisseria meningitidis MC58 # 1 127 1 127 127 229 92.0 1e-60 MFRTMLGGKIHRATVTEADLNYVGSITVDQDLLDAAGILVNEKVAIVNNNNGERFETYTI PGERGSGVVCLNGAAARLVQKGDIVIIMSYVMLSEPEIAAHEPKVVLVDEHNKIRDILSY EPPHTVL >gi|257257215|gb|ACDX02000023.1| GENE 28 29474 - 29797 533 107 aa, chain - ## HITS:1 COG:RP177 KEGG:ns NR:ns ## COG: RP177 COG1324 # Protein_GI_number: 15604052 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in tolerance to divalent cations # Organism: Rickettsia prowazekii # 8 104 51 147 149 83 42.0 8e-17 MSAFKPVIVTTIAPTREEAEKIGSLLLEKQLAACVQYEAIVSQYLWNGEICRDDEIRITI KTSRHCYREIQKTILANHSYECPQILMQNVSRGYAPYLRWLKQSLGL >gi|257257215|gb|ACDX02000023.1| GENE 29 29888 - 30238 383 116 aa, chain + ## HITS:1 COG:no KEGG:NLA_8450 NR:ns ## KEGG: NLA_8450 # Name: not_defined # Def: transposase # Organism: N.lactamica # Pathway: not_defined # 1 116 106 221 221 206 94.0 2e-52 MSKYTLHFKYQAVLHYLHIRSQQRTADHYGISRTHLRRWIRAYQEGGIGALEHPQSKTMT DHRKNPFIVDKPDHEKTQAELIEELCYMRAKVAYLKELKALSQKRTAKDKAKPSKH Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:19:07 2011 Seq name: gi|257257213|gb|ACDX02000024.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont23.1, whole genome shotgun sequence Length of sequence - 29111 bp Number of predicted genes - 29, with homology - 29 Number of transcription units - 16, operones - 9 average op.length - 2.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 69 - 128 4.7 1 1 Tu 1 . + CDS 164 - 1579 803 ## Sulku_2133 LmbE family protein + Term 1594 - 1645 13.7 + Prom 1589 - 1648 5.1 2 2 Tu 1 . + CDS 1671 - 2375 353 ## COG2908 Uncharacterized protein conserved in bacteria + Term 2399 - 2437 -0.1 - Term 2497 - 2547 14.5 3 3 Tu 1 . - CDS 2586 - 3995 1230 ## COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) - Prom 4023 - 4082 8.3 + Prom 4341 - 4400 9.4 4 4 Op 1 13/0.000 + CDS 4502 - 5581 1281 ## COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 5 4 Op 2 . + CDS 5611 - 6594 1427 ## COG0131 Imidazoleglycerol-phosphate dehydratase + Term 6609 - 6658 13.8 - Term 6921 - 6982 15.4 6 5 Op 1 . - CDS 6998 - 8311 1293 ## DNO_1241 lipoprotein - Prom 8363 - 8422 6.1 7 5 Op 2 . - CDS 8566 - 10725 2564 ## COG1629 Outer membrane receptor proteins, mostly Fe transport - Prom 10770 - 10829 6.5 - Term 11157 - 11194 -0.0 8 6 Op 1 . - CDS 11209 - 11631 590 ## NGO1505 hypothetical protein 9 6 Op 2 2/0.000 - CDS 11633 - 12436 1091 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - Term 12455 - 12498 3.7 10 6 Op 3 8/0.000 - CDS 12512 - 12889 824 ## COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) 11 6 Op 4 . - CDS 12942 - 13670 1273 ## COG0854 Pyridoxal phosphate biosynthesis protein - Prom 13701 - 13760 2.7 - Term 13720 - 13755 5.8 12 7 Tu 1 . - CDS 13836 - 15005 1898 ## COG0192 S-adenosylmethionine synthetase - Prom 15074 - 15133 4.9 13 8 Op 1 7/0.000 + CDS 15400 - 16449 1519 ## COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis 14 8 Op 2 . + CDS 16488 - 16709 461 ## COG2991 Uncharacterized protein conserved in bacteria + Term 16759 - 16809 14.7 - Term 17006 - 17058 14.9 15 9 Op 1 . - CDS 17083 - 17430 461 ## gi|284799599|ref|ZP_05984370.2| conserved hypothetical protein 16 9 Op 2 . - CDS 17437 - 17628 289 ## COG4391 Uncharacterized protein conserved in bacteria - Prom 17867 - 17926 4.7 + Prom 17684 - 17743 4.9 17 10 Tu 1 . + CDS 17792 - 18286 580 ## NMCC_0482 hypothetical protein 18 11 Tu 1 . - CDS 18369 - 19109 825 ## COG1381 Recombinational DNA repair protein (RecF pathway) - Prom 19157 - 19216 4.0 - Term 19219 - 19276 6.1 19 12 Op 1 30/0.000 - CDS 19296 - 19631 176 ## PROTEIN SUPPORTED gi|149916415|ref|ZP_01904934.1| 30S ribosomal protein S21 - Prom 19663 - 19722 1.9 20 12 Op 2 . - CDS 19773 - 21968 2288 ## COG2812 DNA polymerase III, gamma/tau subunits - Prom 22046 - 22105 7.4 + Prom 22005 - 22064 5.6 21 13 Op 1 . + CDS 22167 - 22544 134 ## gi|319637640|ref|ZP_07992406.1| aldose 1-epimerase 22 13 Op 2 6/0.000 + CDS 22420 - 22770 294 ## PROTEIN SUPPORTED gi|148984739|ref|ZP_01818007.1| IS630-Spn1, transposase Orf1 23 13 Op 3 . + CDS 22806 - 23267 294 ## COG3335 Transposase and inactivated derivatives + Term 23277 - 23313 3.5 24 13 Op 4 . + CDS 23344 - 24645 1767 ## COG1253 Hemolysins and related proteins containing CBS domains + Term 24818 - 24860 10.4 - Term 24801 - 24853 11.3 25 14 Tu 1 . - CDS 24960 - 26426 1617 ## NMC1163 putative integral membrane protein - Prom 26557 - 26616 5.4 + Prom 26804 - 26863 4.6 26 15 Op 1 2/0.000 + CDS 26901 - 27377 541 ## COG0735 Fe2+/Zn2+ uptake regulation proteins 27 15 Op 2 . + CDS 27365 - 28294 1490 ## COG0523 Putative GTPases (G3E family) + Term 28453 - 28485 1.7 - Term 28373 - 28401 -0.9 28 16 Op 1 5/0.000 - CDS 28441 - 28779 132 ## COG3547 Transposase and inactivated derivatives 29 16 Op 2 . - CDS 28911 - 29105 203 ## COG3547 Transposase and inactivated derivatives Predicted protein(s) >gi|257257213|gb|ACDX02000024.1| GENE 1 164 - 1579 803 471 aa, chain + ## HITS:1 COG:no KEGG:Sulku_2133 NR:ns ## KEGG: Sulku_2133 # Name: not_defined # Def: LmbE family protein # Organism: S.kujiense # Pathway: not_defined # 7 447 1 428 439 226 31.0 2e-57 MLLFTILVVLILGVMCFLMSVMRMHIKRFAYDVTRDYCYDCLPQHFVARLEGGVIKLPQE VDINDTVLAAVSVETSWLGKWLLPYIEIETRKGIWKHYIEYGGRGVRYLNFSDMFDAESR EIFLRGRRVSLENQEVRLTVYPRMSLDDKKILVLAPHADDAELAAYGLYEKYAENAMVVT VTASEAGRFHYENLFSKRCPTETKEQYLEKGRMRVWNSLTVPLLAGVSSENILQLGFFDT TLKTLYRHPEREIPSAKLETADVGIFRRANKSPISEGLHGGSNWHDLVDNMAYVIESFRP DVIVTPSPNIDVHTDHQCTTIAAVEALKKLNYTNGSLFLYTVHYLTDDYPLGNVGATLSL PPFFSEEGSSDMLYFHSIYSHPVDKKTQNRKLLALDAMNDIRPNARNYMDWKYVLRKGLS LLYHDLTSIRSDLISRFVRSNEFFYVVPVSDVHNQETYQKIIYRGGKNHLH >gi|257257213|gb|ACDX02000024.1| GENE 2 1671 - 2375 353 234 aa, chain + ## HITS:1 COG:NMB0544 KEGG:ns NR:ns ## COG: NMB0544 COG2908 # Protein_GI_number: 15676450 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 2 233 3 235 240 317 66.0 1e-86 MPTYFIADLHLSESRPELTELFLRFMHEKAPSARAVYILGDLFDFWIGDDEHSELTDTVS RAVRKVAEGGVECFFVHGNRDFLIGEKFARQAGMVLLPEYSVVDLYGTPTLICHGDTLCT DDVRYQKFRKTVHQKWFQRLFLMLPLKLRLNIARKIRQTSKHDKQYKAAEIMDVNPKFTS DTVHNYGVRLLIHGHTHREHIHKENAYTRIVLGDWRSDYASILEVDERGYRFVE >gi|257257213|gb|ACDX02000024.1| GENE 3 2586 - 3995 1230 469 aa, chain - ## HITS:1 COG:NMB1797 KEGG:ns NR:ns ## COG: NMB1797 COG2027 # Protein_GI_number: 15677636 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) # Organism: Neisseria meningitidis MC58 # 1 468 1 469 469 524 57.0 1e-148 MNWKKTVAAWYLCLMPFSAYALNLGNIPPDEISVYVQELDSGKVIESHRADASVNPASTM KLVTAFSAFEALGKDYRWTTEFKTNGHIEGDSLEGDIYWVGSGDPVFDQDGLKDALQQLQ NKGIRHIKGSLVLDRHLWGTVGNPPDFESDAGSPFMTAPDPNMLAYKVVWLRPESDGAGG ITVETSPPLPDIPIENKTVLSNSGKCGALQNHMRASYSGGKLHIGGKVPESCLGGEMHIN MLSAIEFAHKSFVNQWRALGGTISDDLKTAHAPSNAKILVVSRSKPLSEILTDMNKHSNN LIARSVFLKLGGNGDSETVRRKATEAVSLELATAGVDTENLVLENGSGLSRSERVTAHMM GQMLEKAYFSPFKQEFIDTLPIAGQDGTLKKRLKQPGSRLRLKTGTLKNVRALAGYWLGD KPMIVVVIINSPKASAYLHDLDALVSQIVLPGGNDWIDAKLTCKERMAV >gi|257257213|gb|ACDX02000024.1| GENE 4 4502 - 5581 1281 359 aa, chain + ## HITS:1 COG:NMA1771 KEGG:ns NR:ns ## COG: NMA1771 COG0079 # Protein_GI_number: 15794664 # Func_class: E Amino acid transport and metabolism # Function: Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase # Organism: Neisseria meningitidis Z2491 # 1 358 1 358 365 540 74.0 1e-153 MKDTANFIRDDIKAMSAYRIADLPEGFIKLDAMESPYHPFARFPELSNEWLRLIAQAPIQ LYPNPAASGLQETLRKAFDIPEAAAIALGNGSDELIQFLTLLVAQSGATMLAVEPSFVMY RHNAELYGMNYVGVPLNEDFTLDLPAVLSAIEKHQPALIFIAYPNNPTGVCFRREEVEAI IRAAQGIVVVDEAYGAFSRDSFLPQAGSIENLVVMRTISKIGFAGLRIGYAAGSPAVIGE LVKILPPYNMNQLSLATAKFALQHHDAIQTTIDILKAERERVSNELSAIARLKTFPSEAN FITVRVPDADALFNTLKENRILIKKLHGTHPLLAQCVRITIGSPEQNDAVLDIIRKLYA >gi|257257213|gb|ACDX02000024.1| GENE 5 5611 - 6594 1427 327 aa, chain + ## HITS:1 COG:NMA1772 KEGG:ns NR:ns ## COG: NMA1772 COG0131 # Protein_GI_number: 15794665 # Func_class: E Amino acid transport and metabolism # Function: Imidazoleglycerol-phosphate dehydratase # Organism: Neisseria meningitidis Z2491 # 1 308 3 304 305 433 71.0 1e-121 MTITQLHLANFLQLVEEAGSLTKLARKCGYDNAASLSQLKRRLEEQAEDEKARGIRPSLA AKLEAGMHKRKGWLNRDHSKDKEKASAAEAARQERAAQAAAVTAPAFHMPAEGRAVSITR NTSETQITLSLNLDGTGQYRLDTGVPFLEHMLAQVARHGMIDLDITCKGDLHIDDHHTVE DIGIVLGQALKQALGNKAGIRRYGHAYVPLDEALSRVVIDLSGRPGLVYNIDFTRALIGR FDVDLFEEFFHGVVNHSMMTLHIDNLSGRNAHHQAETVFKAFGRALRMAAECDPRMAGQT PSTKGTLSDESVAVEVAVEKEEAQSEE >gi|257257213|gb|ACDX02000024.1| GENE 6 6998 - 8311 1293 437 aa, chain - ## HITS:1 COG:no KEGG:DNO_1241 NR:ns ## KEGG: DNO_1241 # Name: not_defined # Def: lipoprotein # Organism: D.nodosus # Pathway: not_defined # 231 436 263 488 489 110 35.0 1e-22 MSAINTKIKTIILTAVSAAILSACGGGGGGDTAALSTGSTSTGGSGSPAKNGGTGNNNNA NTGNANNDNSTAQTPTLSNKADKLQELKDEAPLPALNQDTPLHTHVISSESAQQGNPNVQ LRMKRNNDTTEYTGGYYQTDSQENDQHGLISSLNFKQDGSVKTDELKLDAVVIANQRNEG KATQAEWPSSSSLIVKAFSEDTTPPTFSNPLDPLNPGHRDLVYSDISKIAYFKKGNLVSG DGKNVVFDKRFDGVYVIQFTDGTQIVMHDPAAAGWAYQTFAFYKDPKNDVAFGYQSLGDE TKFTALPASGTATYNGLTTAYVVKDDQSRQLTANVKAIVDFGLKGVRFETANSQFHSLDA NGRRVTVKGADYDMKGTAKWENGNLFLGKVEAAAAGLKGNLSGKFFGPSAAEIGGTYGLQ KEDGSEHLIGGYGAKRQ >gi|257257213|gb|ACDX02000024.1| GENE 7 8566 - 10725 2564 719 aa, chain - ## HITS:1 COG:NMB1988 KEGG:ns NR:ns ## COG: NMB1988 COG1629 # Protein_GI_number: 15677816 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Neisseria meningitidis MC58 # 19 650 16 671 714 364 37.0 1e-100 MKSPHSPAFRFSIMVLALSSGFAHAENIKPEATAELKEVVVTGTAVPTRVTRNQLDRETS TDLKQVMKDQIGMDVGGGNGVAQFYSIRGVGEDKINLEVDGTSQSTKIFLHQSRFQLDPA LVKSINVEKGTGAASAGLGAVGGTIRVTTVDAKDLLTDGKPFGFKLGAGLSSNKGSTGNA AVYGYQNGFDALFAGNFLNNRDYKDGNGNVNRGSRLKQHSYLAKIGYDFNDDHGIRLTYR QEYQKGNRTDKAEFQNVDSYIGVDGTYQKEQSYNLEYRGRNVGFLDKIDANVFQINTDDT KPPKGAPSPKAQASGTAQGGVPLGQLELSKIKATGANLNLASSFGDGHMVKYGVNYRHET SEPSDKGAWLKILGLYDRDKEKKAEYGVYAEGIWNLHPVTLTTGLRYDHFKYNAASKQSA SHGQLNPSIGAIWDINDNFSLLANLNQASRAPRLNEALLANERAGAAADLDSNLKAETAR RAELGFKWRNDNFNVSGSVFHQRIKDLIVYRWAKINNNTASITERGKIYNGGTLKTYGYE LDASYRWGGLTARAGVSYVKPRLNGEMYYGESPIQAEDHESSFTFWNTGRQWLTGLSYQF ENPKLEIGWRGRYAQSVKYTDVARGQGTIHGKKSGYGVHDIYANWQPLKKRQPERQLRRQ QHRQQAIPFAQPTLPRRQRTRALLRARPRVHLGRELPLLIKTLTKGRLKPDFWVSDDLF >gi|257257213|gb|ACDX02000024.1| GENE 8 11209 - 11631 590 140 aa, chain - ## HITS:1 COG:no KEGG:NGO1505 NR:ns ## KEGG: NGO1505 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae # Pathway: not_defined # 1 140 1 140 140 160 69.0 2e-38 MDKNRKLLIAGVLLILFAAAKLLLLDWWQKQQPQARAAECDLIKGCTLSDGSHVRSTPIS TRSAFDITVENAPAETQQVSISFSMKDMDMGFNRYMLKQQSPRTWQAHQIRLPVCVEGRR DYIADITIGGQTFQTTFTAQ >gi|257257213|gb|ACDX02000024.1| GENE 9 11633 - 12436 1091 267 aa, chain - ## HITS:1 COG:NMA2032 KEGG:ns NR:ns ## COG: NMA2032 COG0494 # Protein_GI_number: 15794912 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Neisseria meningitidis Z2491 # 1 261 1 261 269 359 71.0 3e-99 MTQDTRPLIRVVAGILLNQDGDYLLSSRPEGKPYAGYWEFAGGKVEAGETDFQALEREFE EELGIRILAATPWLTKIHSYEHARVCLKFLWVNPDQWTGEPQSREGQAWSWQKAGDFNVA PMLPANGPLLRALSVPRQLQGRLKTGLHGQNRSGEYRVAPYSLAEPQHANILISETELRK LGKLPKAQSVWVSVHTREQWQRIPDSDVVVWQVNDDASAQQVLEILGQGVSVPLVVAAPE TLVSNYRDRWLSTGAHAVLTDNDTEVV >gi|257257213|gb|ACDX02000024.1| GENE 10 12512 - 12889 824 125 aa, chain - ## HITS:1 COG:NMA2033 KEGG:ns NR:ns ## COG: NMA2033 COG0736 # Protein_GI_number: 15794913 # Func_class: I Lipid transport and metabolism # Function: Phosphopantetheinyl transferase (holo-ACP synthase) # Organism: Neisseria meningitidis Z2491 # 1 125 1 125 125 214 96.0 3e-56 MIYGIGTDIVSLKRIIRLSKKFGQAFAERILTPEELLEFPQAGKPVNYLAKRFAAKEAFA KAVGTGIRGAVSFRNIGIGHDALGKPEFFYAPALSKWLEEQGISHVSLSMSDEEDTVLAF VIAEK >gi|257257213|gb|ACDX02000024.1| GENE 11 12942 - 13670 1273 242 aa, chain - ## HITS:1 COG:NMA2037 KEGG:ns NR:ns ## COG: NMA2037 COG0854 # Protein_GI_number: 15794917 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxal phosphate biosynthesis protein # Organism: Neisseria meningitidis Z2491 # 1 242 1 242 242 432 95.0 1e-121 MLLGVNIDHIATVRNARGTTYPSPVEAALVAETHGADLITMHLREDRRHIKDADVFAVKN AIRTRLNLEMALTEEMLENALKVMPQDVCIVPEKRQEITTEGGLDVLAQQEKIAEFTKIL TDAGIRVSLFIDADNDQIQAAYDVGAPVIELHTGAYADAHSHAEQIQQFERLQNGAHFAS DLGLVVNAGHGLTIHNVTPIAQILAIRELNIGHSLIAQALFLGLPEAVRQMKETMFRARL LP >gi|257257213|gb|ACDX02000024.1| GENE 12 13836 - 15005 1898 389 aa, chain - ## HITS:1 COG:NMB1799 KEGG:ns NR:ns ## COG: NMB1799 COG0192 # Protein_GI_number: 15677637 # Func_class: H Coenzyme transport and metabolism # Function: S-adenosylmethionine synthetase # Organism: Neisseria meningitidis MC58 # 1 389 1 389 389 722 96.0 0 MSEYLFTSESVSEGHPDKVADQVSDAILDAVLAQDPKARVAAETLVNTGLCVLAGEITTT AHVDYIKVARETIKRIGYNSSELGFDANGCAVGVYYDQQSPDIAQGVNEGEGIDLNQGAG DQGLMFGYACDETPTLMPFAIYYSHRLMQRQSELRKDGRLPWLRPDAKAQLTVVYDSETG KVKRIDTVVLSTQHDPAISHEELSKAVIEQIIKPVLPPEMLTAETKYLINPTGRFVIGGP QGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYACRYVAKNIVAAGLATQCQ IQVSYAIGVAEPTSISIDTFGTGKISEEKLIALVREHFDLRPKGIVQMLDLLRPIYSKSA AYGHFGREEPEFTWERTDKAAALKAAAGV >gi|257257213|gb|ACDX02000024.1| GENE 13 15400 - 16449 1519 349 aa, chain + ## HITS:1 COG:NMB0563 KEGG:ns NR:ns ## COG: NMB0563 COG1477 # Protein_GI_number: 15676468 # Func_class: H Coenzyme transport and metabolism # Function: Membrane-associated lipoprotein involved in thiamine biosynthesis # Organism: Neisseria meningitidis MC58 # 3 348 7 350 351 487 71.0 1e-137 MHLPSAIPALATALILTLPLGACGKKTSEQTVLQGETMGTTYTVKYLSDDLPNPPAPEAV KKQIDGALEEVNRQMSTYREDSEISRFNQMRETRKPMPVSADFAAVTAEALRLNRLTQGA LDVTVGPLVNLWGFGPNKEITREPTQAEIDKAAAQTGTDKIILTQNGKQATLAKTQPETY LDLSSIAKGFGVDKVAGELEKLGINNYLVEIGGELHGKGRNAQGEPWRIGIEQPNIVQGG NTQIVVPLDNRSLATSGDYRIFHVDPQGRRLSHIIDPKTRRPLSHRLASISVVADNATTA DGLSTGLFVLGETEALKLAEQQNLAVFLIIREQNGYRTEMSGAFKKLLH >gi|257257213|gb|ACDX02000024.1| GENE 14 16488 - 16709 461 73 aa, chain + ## HITS:1 COG:NMA0745 KEGG:ns NR:ns ## COG: NMA0745 COG2991 # Protein_GI_number: 15793720 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 72 1 70 71 107 81.0 5e-24 MKTLLLTFGLFLLVILGMAVGYIFSKRTIKGSCGGISSLGMKKVCDCDTPCDTLQKKLDE QKQQENKGITVDH >gi|257257213|gb|ACDX02000024.1| GENE 15 17083 - 17430 461 115 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|284799599|ref|ZP_05984370.2| ## NR: gi|284799599|ref|ZP_05984370.2| conserved hypothetical protein [Neisseria subflava NJ9703] conserved hypothetical protein [Neisseria subflava NJ9703] # 8 115 11 118 118 142 62.0 6e-33 MKRYALLLLLGLCTACGSYKAVRPDAPLAVVAEAQNNAIRYQAADGSRISAIYVNSNSPM TVELRQGSTVEKLTQTHSMTKTTEYRNASTIWQLQDGFATLTRGGKTVVFTEIIE >gi|257257213|gb|ACDX02000024.1| GENE 16 17437 - 17628 289 63 aa, chain - ## HITS:1 COG:NMA0721 KEGG:ns NR:ns ## COG: NMA0721 COG4391 # Protein_GI_number: 15793698 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 2 63 3 66 67 78 56.0 3e-15 MNANTETVIIYPKDLPLHCSGPNHETWNGHPRVFLPIQSDSDIECPYCGTRYHLEGHIPH HHY >gi|257257213|gb|ACDX02000024.1| GENE 17 17792 - 18286 580 164 aa, chain + ## HITS:1 COG:no KEGG:NMCC_0482 NR:ns ## KEGG: NMCC_0482 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_053442 # Pathway: not_defined # 1 163 1 163 165 200 58.0 2e-50 MTTLFRQDDLNPQDAAEFLYTLSAAYLDYTDAAGDEEMRCLNDEQHTLTAYCYLDSQVQE GGFVQLIAAGYGEYVFHNPVADSLRRWRIKPTPKILDKAKALYERDGAKIEEMAGSGASL DAIRAEFPDFEELDGEYYEIADDDMAAAVAYVLANWEKFAEIAD >gi|257257213|gb|ACDX02000024.1| GENE 18 18369 - 19109 825 246 aa, chain - ## HITS:1 COG:NMA2038 KEGG:ns NR:ns ## COG: NMA2038 COG1381 # Protein_GI_number: 15794918 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Neisseria meningitidis Z2491 # 1 242 2 243 264 334 71.0 1e-91 MTNQRINHEPIFLLASAPWRESSLWVEVFSRRYGRVALLARSARKRQSELRGVLVPFVPV SASWYGSQELKTLHRAEWIGGWPQPQGRALFSGLYINELMLKLTAREDPIPELYDALEAV MRAVCGENSHTAALRRFEWALLTRLGFAPDLFHDGNGEAIRAEETYWLTPENAVVPIEEA ERFNPRNHGVAVSGDILIQLREGDFTHPESLGQSLKITRLLIDNLLPEGIKSRQVLQQLQ QFSFGI >gi|257257213|gb|ACDX02000024.1| GENE 19 19296 - 19631 176 111 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149916415|ref|ZP_01904934.1| 30S ribosomal protein S21 [Roseobacter sp. AzwK-3b] # 10 102 14 104 114 72 40 3e-12 MFGKAGLGGLMKQAQQMQENMKKAQAKLAETEVEGEAGNGLVKVVMTCAHVVRKLEISPD LIQEAADDKEMLEDLVLAAINAASEKAEETTNKTMGAFTQGLPAGMGDFFR >gi|257257213|gb|ACDX02000024.1| GENE 20 19773 - 21968 2288 731 aa, chain - ## HITS:1 COG:NMB1443 KEGG:ns NR:ns ## COG: NMB1443 COG2812 # Protein_GI_number: 15678010 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, gamma/tau subunits # Organism: Neisseria meningitidis MC58 # 1 727 1 700 704 907 73.0 0 MAYQVLARKWRPKTFADLVGQEHVVKALRNALDEGRLHHAYLLTGTRGVGKTTIARILAK SLNCENAQHGEPCGVCQSCTQIDTGRYVDLLEIDAASNTGIDNIREVLENAQYAPTAGKY KVYIIDEVHMLSKSAFNAMLKTLEEPPEHVKFILATTDPHKVPITVLSRCLQFVLRNMTS QQVADHLAHVLNNENIAYEPAALQLLGRAAAGSMRDALSLLDQAIAMGSGSVAEQDVRQM IGAVDKQYLYELLAGIVNQDGEALLAKAQEMAARAIGFDSALSELAMLLQRLALIQAVPS ALANDDPERETLLQLSQALSGEQIQLYYQCAIHGKQDLSLAPDEYAGFVMTLLRMLAFAP LAADAHDVGGHIENTELHSAETGVHTAKKPLQLPKAEAAKPPVQTTPAPATSSENKVAEP VSIKGNDDVPPWEDAPGDEETVSDTPAQESAESIQTTSKAVETDIQSANEAEAPFQTTPQ AETSSENQVSDNEAANNETDVSLSDTSSENPENTNPIQTTPIAETAEAEAFEHEAYTAPF YDYSPSDHDYPVEDSAEMPPPPDWEHAVPADTAEAESEAEEDSDDEDGTQFAPLPEFSTE NWAAIVRHFARKLGAAQMLAQHAAWTNYDAGSHLMMLSMTDEARATANKERLDKIKNTLA EAYGIPLKLQTEPWRDDAGWETPTMRRQRLQLEGRQQAQDLLEADETARQVLKVFEAQWQ PDSLELAEQAE >gi|257257213|gb|ACDX02000024.1| GENE 21 22167 - 22544 134 125 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|319637640|ref|ZP_07992406.1| ## NR: gi|319637640|ref|ZP_07992406.1| aldose 1-epimerase [Neisseria mucosa C102] aldose 1-epimerase [Neisseria mucosa C102] # 1 62 17 78 253 119 85.0 9e-26 MSEIILRNYSASMQINTMGAYVDALVLQGREVLFPKTSVQVGTDTKLRGGMHVCLPQFGP DSIVNQNKKYIILSLNSTPYPFPFYGLLYRFPSKSIRPLRTARQHQPNRTHLPHYQPNPL PMDCP >gi|257257213|gb|ACDX02000024.1| GENE 22 22420 - 22770 294 116 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148984739|ref|ZP_01818007.1| IS630-Spn1, transposase Orf1 [Streptococcus pneumoniae SP3-BS71] # 1 116 1 116 116 117 44 7e-26 MAYSIDFRQKALDHYEQHGNISQTARTFRITNRTLYQWIALKKETGSLQHRTKGGNSERI DKEELRRYVAEHPDAYQYEIAQHLGCTASNVGYLLKTLKITRKKRQPSTKNKTSKK >gi|257257213|gb|ACDX02000024.1| GENE 23 22806 - 23267 294 153 aa, chain + ## HITS:1 COG:SP0016 KEGG:ns NR:ns ## COG: SP0016 COG3335 # Protein_GI_number: 15899965 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 42 152 1 111 112 140 57.0 1e-33 MPKVYLDETGFDTFYYRPYAYALRGQIVKARISGKRYERMSLVAARGDRELVAPMIYKGT MDSSLFEAWFGQFLLKELKEPSVIIMDNARFHRMAVLREMAQRAGHIILPLPPYSPELNP IEKVWANIKRHLRKVMSGCLSFEQALLGIFCFV >gi|257257213|gb|ACDX02000024.1| GENE 24 23344 - 24645 1767 433 aa, chain + ## HITS:1 COG:PM1677 KEGG:ns NR:ns ## COG: PM1677 COG1253 # Protein_GI_number: 15603542 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Pasteurella multocida # 1 424 16 440 449 515 64.0 1e-146 MNILEALLLLCLLIVISAFVSCSELALASARKIKLQVMAKDGGDTRALDVLNMQQQPGSF ITVVQIGLNAVAILAGIVGEAAVRPYFGGLLENAGSWGSTAASLLTFALVTGSFILIADL MPKRMAMTHPEAVAVRIVRPMMFLIFILKPVVWIFDGMANAIFKLFKISTVRQEQLTSED IYAVVDAGAQAGVLKQQEHYLIENIFDMQARTVTSTMSTREYIAYFDKNDGSDTVLAIMS EKPHNKFLVCDGDLERVIGYIESHTLLTLFLKEKDVRLTDKRVLRKALFIPDTLSLYDVL ETFKTSGEDFAVVVNEYALVVGVVTLKDVMSIVMGELVNTEEEPQIIRRTEDTWLVDGAT PLADVMRALDIEEFPNSENYETIAGFMMYSLRKIPKRTDFLVYAGYKFEIIDTENLKIDQ LLVSKQGEDVVSR >gi|257257213|gb|ACDX02000024.1| GENE 25 24960 - 26426 1617 488 aa, chain - ## HITS:1 COG:no KEGG:NMC1163 NR:ns ## KEGG: NMC1163 # Name: not_defined # Def: putative integral membrane protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 3 487 18 502 503 757 80.0 0 MNHDTSYSGMHKPSSDFESREAYLEHELQIMQPKRWRLNLPFRDYRFEPEDLIPAVAGTI GKVVMVSAVAAAFAVPLGLPDTFLPQNVRYELLIASVFILLLSGLFLPTSNLPGTHGPLI PLIPVVVAAGGHPLAFGLLIGVFGFLLGITKGGSLMAKLTSNGVCGGLLLYLGFVGTTGQ VKKLFEWAGSFDKSYIAFIVIIGTILLYALLEHWRKRWLAVPLGCVLAGFTAYLLGAPFS FQTAPGLPPMSPAYWWGENTGWMMGLPTIDSFLVVFPFAVLAVAMWSPDFLGHQVFQKIS YPERSEKALMNIDDTMFTCSVRQVAGSVLGGANFTSSWGTYIVPASIAKRPIPAGAILTA LFCIIASVWGYPMDLAIWQPVLSVALIVGVYVPLLEAGMEMTRKGKTTQSAAIVVFSSAL VNPVFGWSLTMLLDNLGLIGSKERSAELGFMGRVVVPGVGFVILCAAMGAVGMLPGIPAF LEQFRNLH >gi|257257213|gb|ACDX02000024.1| GENE 26 26901 - 27377 541 158 aa, chain + ## HITS:1 COG:NMA1471 KEGG:ns NR:ns ## COG: NMA1471 COG0735 # Protein_GI_number: 15794372 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Neisseria meningitidis Z2491 # 1 158 1 158 158 270 94.0 6e-73 MKHAIKQKILEQARRDGVQVTALREQVLDIVLQQSGVIKAYNVLSQMQQQSEGVVAPPTA YRALDFWAEQGVLHKVAAVNGYILCSHAQHECDDHCHDHEEAEAHHSAFILVCTECGTAD EQTLSHEWAALRAGVAESGFALKEEHVVLTGICKKCQK >gi|257257213|gb|ACDX02000024.1| GENE 27 27365 - 28294 1490 309 aa, chain + ## HITS:1 COG:NMA1470 KEGG:ns NR:ns ## COG: NMA1470 COG0523 # Protein_GI_number: 15794371 # Func_class: R General function prediction only # Function: Putative GTPases (G3E family) # Organism: Neisseria meningitidis Z2491 # 1 308 1 308 308 611 96.0 1e-175 MSEVKKTKVHLISGFLGTGKTTALKSLMEQKDPNEKWVIIVNEFGEIGIDGAVLSDNGIP VAEIAGGCLCCTAGPQMGVTVQKMLRDAKPDRLMIEASGLAHAASVIDELKAKPLDSLLE IGAVFTVVDPRQFINPDYAQQALYKDQIGICDVLVASKTDLCTPEQLAEFHDKAAKLFPP KAKVVEVQNAQLDIQWLDIPVVEKSRYRLKALPDNTMGFQSQGFTFPAGRDFDGEKLTNF FNDLPKFTDGLVRAKGVFQVLGTWVWLNWVDGQWGANQVSWRRDSRFELIAKSFDADLIE KKLQEALEK >gi|257257213|gb|ACDX02000024.1| GENE 28 28441 - 28779 132 112 aa, chain - ## HITS:1 COG:NMA2085 KEGG:ns NR:ns ## COG: NMA2085 COG3547 # Protein_GI_number: 15794960 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Neisseria meningitidis Z2491 # 1 112 82 193 193 212 93.0 2e-55 MAMLPELGRLSHKRLASLVGIAPHPRESGETKFKSRCFGGRSAVRKALYMATVVATRFEP LIRDFYQRLLSKGKPYKVAVTACMRKLLTILNARMRDYFAENDTTENGIQTA >gi|257257213|gb|ACDX02000024.1| GENE 29 28911 - 29105 203 64 aa, chain - ## HITS:1 COG:NMB1602 KEGG:ns NR:ns ## COG: NMB1602 COG3547 # Protein_GI_number: 15677452 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Neisseria meningitidis MC58 # 1 48 98 145 372 82 85.0 2e-16 MLAFFAQMTAQKEGWQTMLYQPPTEAEEVLEALVNRRNQLVDMRTAEKTVCIRFTKRKSK ASNN Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:20:01 2011 Seq name: gi|257257211|gb|ACDX02000025.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont24.1, whole genome shotgun sequence Length of sequence - 27710 bp Number of predicted genes - 25, with homology - 24 Number of transcription units - 14, operones - 6 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 59 - 409 392 ## NLA_8450 transposase 2 1 Op 2 9/0.000 - CDS 505 - 699 90 ## COG2879 Uncharacterized small protein 3 1 Op 3 . - CDS 689 - 2770 3330 ## COG1966 Carbon starvation protein, predicted membrane protein - Term 3119 - 3171 14.7 4 2 Tu 1 . - CDS 3200 - 4240 1399 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases - Prom 4348 - 4407 4.7 + Prom 4324 - 4383 5.8 5 3 Op 1 . + CDS 4403 - 5482 679 ## PROTEIN SUPPORTED gi|46129221|ref|ZP_00155777.2| COG1194: A/G-specific DNA glycosylase + Term 5551 - 5589 -0.1 6 3 Op 2 . + CDS 5666 - 7162 1819 ## COG0397 Uncharacterized conserved protein + Term 7228 - 7275 11.8 - Term 7208 - 7268 17.4 7 4 Tu 1 . - CDS 7307 - 8053 983 ## COG0765 ABC-type amino acid transport system, permease component - Prom 8128 - 8187 8.9 + Prom 8130 - 8189 6.0 8 5 Tu 1 . + CDS 8414 - 9766 2167 ## COG0826 Collagenase and related proteases + Term 9768 - 9815 15.2 + Prom 10121 - 10180 2.5 9 6 Tu 1 . + CDS 10219 - 10377 175 ## + Term 10438 - 10474 8.2 + Prom 10476 - 10535 13.0 10 7 Op 1 . + CDS 10598 - 11017 371 ## Aasi_1471 hypothetical protein 11 7 Op 2 . + CDS 11073 - 11393 431 ## COG3293 Transposase and inactivated derivatives 12 7 Op 3 . + CDS 11390 - 12661 665 ## LHK_01554 hypothetical protein + Term 12741 - 12778 8.0 - Term 12729 - 12766 8.0 13 8 Tu 1 . - CDS 12792 - 15047 2998 ## COG3256 Nitric oxide reductase large subunit - Prom 15242 - 15301 7.4 14 9 Tu 1 . + CDS 15522 - 16706 1611 ## COG2132 Putative multicopper oxidases + Term 16751 - 16801 3.1 + Prom 16894 - 16953 3.5 15 10 Tu 1 . + CDS 17143 - 17895 925 ## COG1262 Uncharacterized conserved protein + Term 17921 - 17955 3.1 - Term 18080 - 18143 9.2 16 11 Op 1 . - CDS 18148 - 19413 1330 ## COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis 17 11 Op 2 . - CDS 19416 - 20288 910 ## mma_2128 hypothetical protein 18 11 Op 3 8/0.000 - CDS 20293 - 21048 866 ## COG3063 Tfp pilus assembly protein PilF 19 11 Op 4 11/0.000 - CDS 21051 - 22145 1192 ## COG0820 Predicted Fe-S-cluster redox enzyme - Prom 22285 - 22344 2.7 - Term 22344 - 22410 20.0 20 12 Op 1 2/0.400 - CDS 22411 - 22836 567 ## COG0105 Nucleoside diphosphate kinase - Prom 22890 - 22949 5.2 21 12 Op 2 . - CDS 22955 - 24091 926 ## COG1485 Predicted ATPase - Prom 24155 - 24214 5.7 - Term 24244 - 24279 5.8 22 13 Op 1 16/0.000 - CDS 24292 - 24588 291 ## COG0776 Bacterial nucleoid DNA-binding protein 23 13 Op 2 21/0.000 - CDS 24617 - 26296 2788 ## PROTEIN SUPPORTED gi|241758882|ref|ZP_04756995.1| ribosomal protein S1 - Prom 26384 - 26443 2.0 - Term 26377 - 26432 18.2 24 13 Op 3 . - CDS 26458 - 27117 728 ## COG0283 Cytidylate kinase - Prom 27221 - 27280 6.1 25 14 Tu 1 . - CDS 27356 - 27709 286 ## COG2801 Transposase and inactivated derivatives Predicted protein(s) >gi|257257211|gb|ACDX02000025.1| GENE 1 59 - 409 392 116 aa, chain - ## HITS:1 COG:no KEGG:NLA_8450 NR:ns ## KEGG: NLA_8450 # Name: not_defined # Def: transposase # Organism: N.lactamica # Pathway: not_defined # 1 116 106 221 221 208 96.0 5e-53 MSKYTLHFKYQAVLHYLHIRSQQRTADHYGISRTHLRRWIRAYQEGGIGALEHPQSKTMT DHRKNPFIADKPDHEKTQAELIEELCYMRAKVAYLKELKALSQKRTEKDKAKPSKH >gi|257257211|gb|ACDX02000025.1| GENE 2 505 - 699 90 64 aa, chain - ## HITS:1 COG:NMA1699 KEGG:ns NR:ns ## COG: NMA1699 COG2879 # Protein_GI_number: 15794592 # Func_class: S Function unknown # Function: Uncharacterized small protein # Organism: Neisseria meningitidis Z2491 # 1 64 1 64 64 118 93.0 3e-27 MKRKLAAWWKTAKLTANLMAGVPDYENYVAQQRKHNPNAPVMTELQFQDYCRKRRCGANG GRCC >gi|257257211|gb|ACDX02000025.1| GENE 3 689 - 2770 3330 693 aa, chain - ## HITS:1 COG:NMB1493 KEGG:ns NR:ns ## COG: NMB1493 COG1966 # Protein_GI_number: 15677346 # Func_class: T Signal transduction mechanisms # Function: Carbon starvation protein, predicted membrane protein # Organism: Neisseria meningitidis MC58 # 1 693 1 693 693 1226 96.0 0 MKSLKTFLIWGIVVLVGVASFTTLALSRGEQVSAVWMVTAAVSVYCIAYRFYSLYIAKYV MQLDPNRLTPAERHNDGLDYVPTHKGVLFGHHFAAIAGAGPLVGPVLAAQMGYLPGTLWI IFGVVFAGAVQDMMVLFVSMRRDGKSLGDIVKQELGTVPGVIASIGILMIMVIIMAVLAL IVVKALVHSPWGTFTIAATMPIALFMGIYTRYIRPGKIGEISIVGFILLMLAVIYGDNVA HSSIGHWFDLDGLQLTWAIMIYGFVASVLPVWLLLTPRDYLSTFLKIGTIVALAIGILIV SPALQMPAVTHFIDGSGPVFSGALFPFLFITIACGAVSGFHALISSGTTPKMLENETHVR MIGYGGMLMESFVAIMALAAAASLDPGVYFAMNSPAALIGTDANTAAEVITTKLQFPVDA ATLLHTAKEVGENTILSRAGGAPTLAVGMAHIMSRLIPGEAMMAFWYHFALLFEALFILT AVDAGTRVARFMIQDLGSIFYKPFGNTDSIPANLIATFFAVALWGYFLYTGVTDPLGGIN SLWPLFGIANQMLAGVALIMCAVVLIKMKRDRYVWVALVPAVGVLFVTCYAGLQKLFHSD PRVSFLAHAGKYSDALAKNEVLAPAKDIGEMSQIIFNDQINAGLTALFLSVVVVVAIYGV RTAMKARKVGWSTAKEIPAVYRDGKQPEAQSEA >gi|257257211|gb|ACDX02000025.1| GENE 4 3200 - 4240 1399 346 aa, chain - ## HITS:1 COG:NMB1395 KEGG:ns NR:ns ## COG: NMB1395 COG1063 # Protein_GI_number: 15677256 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Neisseria meningitidis MC58 # 1 346 1 346 346 686 97.0 0 MKAMVYHGANDIRFEEKPRPQIIDPTDAVVKIVKTTICGTDLGIWKGKNPEVADGRILGH EGIGIVEEVGEAVKNVKVGDKVIISCVSKCCTCDNCKIQLYSHCRNGGWILGYMIDGTQA EYVRTPYADNSLVPLPDSVNEEVALLLSDALPTAHEIGVQYGDVKPGDTVFIAGAGPVGM SALLTAQLYSPAAIIVCDMDENRLKLAKELGATHTISPASGDVSKQVFTIVGEDGVDCAI EAVGIPATWNMCQDIVKPGGHIAVVGVHGQSVDFKLEKLWIKNLAITTGLVNANTTEMLM KAISSSSVDYTKMLTHRFKFSELEKAYDVFKHAAENQAMKVVLEAD >gi|257257211|gb|ACDX02000025.1| GENE 5 4403 - 5482 679 359 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|46129221|ref|ZP_00155777.2| COG1194: A/G-specific DNA glycosylase [Haemophilus influenzae R2846] # 6 353 10 366 378 266 40 1e-70 MNTPTPFSERLIRWQKQHGRHHLPWQVQNPYCVWLSEIMLQQTQVATVLDYYPRFLEKFP TVQTLAAAPQDEVLSLWAGLGYYSRARNLHKAARQVVEEFDGTFPSERKDLETLCGVGRS TAAAICAFAFNRRETILDGNVKRVLCRVFARDGNPQDKKFENSLWTLAESLLPPENADMP AYTQGLMDLGATVCKRTKPLCHQCPMADICEAKKQNRIAELPRKKTATEVQTLPLYWLII RDQDGAILLEKRPAKGIWGGLYCVPCFEKLDEAYACAEKLGIFSECAASPWDDLSEQPTL THRLTHRLLMITPFEAQTSSSENTVLPPNCLWVKPENLTDYGLPKPLADYLKQRQQALF >gi|257257211|gb|ACDX02000025.1| GENE 6 5666 - 7162 1819 498 aa, chain + ## HITS:1 COG:RSc1748 KEGG:ns NR:ns ## COG: RSc1748 COG0397 # Protein_GI_number: 17546467 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Ralstonia solanacearum # 5 498 23 525 525 426 49.0 1e-119 MHTLPLLTQQFAELSPFFYSRVSPEPLTAPYWVAFNTDLAAELNLDTDFQTTSNLAYLSG NAPQYAPAPIASVYSGHQFGVYTPRLGDGRALLIGDSVDTAGQRQEWQLKGAGKTPYSRF ADGRAVLRSSIREYLCSEAMHGLGIPTTHALALCGSDDPVYRETVETAAVLTRIAPSFLR FGHFEYFYYTGREAEIRQLADYLIRHYYPDCQDTDNPYAALLEQIRNRTADTVAAWQSVG FCHGVMNTDNMSALGLTIDYGPFGFLDDYGPFGFLDDYDRRHVCNHSDTQGRYAYNAQPF VAHWNFAALASCFDALVPHDTLEQLIDGWTEVFQTTYLEKMRRKLGLQQADKRDDESLIA DLFAALQDQKTDFTLFFRNLSEVSNTHGEPLPPALEQTFKNGVPPSFIRWLGRYRQRLRA ENSDPAERAIRMNRTNPLYILRNYLAEQAIAQARNGNYREIERLRRCLARPFDEQAEFAD LAEPPPEGSIPVCVSCSS >gi|257257211|gb|ACDX02000025.1| GENE 7 7307 - 8053 983 248 aa, chain - ## HITS:1 COG:NMA1709 KEGG:ns NR:ns ## COG: NMA1709 COG0765 # Protein_GI_number: 15794602 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Neisseria meningitidis Z2491 # 1 248 1 248 248 392 91.0 1e-109 MDFRFDIIYEYRWMFFYGALTTLGLTVVATAGGSVLGLLLALARLIHLEKAGAPMRALAW VLRKVSLLYVTLFRGTPLFVQIVIWSYVWFPFFVHPTDGVLINGDQAVEIRRSYGALIAG SLALIANSGAYICEIFRAGIQSIDRGQMEAARSLGLSYPQAMRYVILPQALRRMLPPLAS EFITLLKDSSLLSVIAVAELAYVQSTISGRYSVYEEPLYTVALIYLMMTTFLGWVFLRLE NRYNPQHR >gi|257257211|gb|ACDX02000025.1| GENE 8 8414 - 9766 2167 450 aa, chain + ## HITS:1 COG:NMB1664 KEGG:ns NR:ns ## COG: NMB1664 COG0826 # Protein_GI_number: 15677513 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Neisseria meningitidis MC58 # 1 449 1 449 451 904 97.0 0 MKAPELLLPAGGLERMRAAYDYGADAVYAGSPRYSLRARNNEFAKLDVLEQGIKEAHERN KKFFLTVNTLPHNSKLKTFVADMEPLIAMKPDALIMADPGLIMTVREKWPEMPIHLSVQA NTTNYWGVKFWQNIGVERIILSRELSMEEIAEIRQECPDIELEVFIHGALCIAYSGRCLL SGYFNHRDPNQGTCTNSCRWDYKVHNATESDAGDAQLLQGFNFEKAQEEANQNFEGINGQ KRHPYADKVFLIEESNRPGEMMPIMEDEHGTYIMNSKDLRGIEVVEKLAKIGVDSLKVEG RTKSLYYVARVAQSYRKAIDDAVAGRPFDYGLLSELEGLANRGYTSGFLERHQTQDYQNY LSGHSTAKQSQYVGHVTEIDAEGWATVEVKNRFAVGDTLEIIHPEGNQTITLEQMTRKGA AVEVAPGNGIQVKIPNMQGKEKALLARVIK >gi|257257211|gb|ACDX02000025.1| GENE 9 10219 - 10377 175 52 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLHYAVVFFVIAIIAAVLGFGGIAGSAAGIAKILFVGFLILSVLSLIFGKKK >gi|257257211|gb|ACDX02000025.1| GENE 10 10598 - 11017 371 139 aa, chain + ## HITS:1 COG:no KEGG:Aasi_1471 NR:ns ## KEGG: Aasi_1471 # Name: not_defined # Def: hypothetical protein # Organism: A.asiaticus # Pathway: not_defined # 1 129 13 147 157 96 45.0 3e-19 MKYENLIQRSDREFKRLTGVTPVLFHEMLQITTEAESRKVKSGRPHTLSLADQLLLTLSY LRHYHTQLELAAIYGLSESNVCRTIRKTEDALIRCKRFSLPKHKNPGDHTVIIDVTESPI ERPKKTAAVLQRQEKAAHG >gi|257257211|gb|ACDX02000025.1| GENE 11 11073 - 11393 431 106 aa, chain + ## HITS:1 COG:SP1928 KEGG:ns NR:ns ## COG: SP1928 COG3293 # Protein_GI_number: 15901752 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 5 103 24 124 129 81 47.0 3e-16 MGAQHDMRLARRHLTELYPYKIVIADKGYQGLAKTGLQTPKKKSKHHLLNKQDKEANRRL GKLRTVIEHINRKLKIFKILSLPYRNRRKRFGLRANLIAGLINAMG >gi|257257211|gb|ACDX02000025.1| GENE 12 11390 - 12661 665 423 aa, chain + ## HITS:1 COG:no KEGG:LHK_01554 NR:ns ## KEGG: LHK_01554 # Name: not_defined # Def: hypothetical protein # Organism: L.hongkongensis # Pathway: not_defined # 266 410 761 890 1940 115 46.0 4e-24 MNIFARGLINKTQAEANATLYARAVETLAGRLNIGIRDFDAAYGGLNVVGESLLDDGVLN QALASNPPRGWVHSKNPQDAINIWTTDGREAAKNEAVFWTLDNAADTGIADTQGYSHSIS QFAAHHIYKEHGNTKTGEERGQIAVTAEDLTRIPDIVTLPDKIITGFQSEQGAERVAYLK RFDDGLMVYIAEASRKKKDFRAISMRKYPPTAISENVIKNISSQSLNVRNGEGAYDNSTP NTDTNQDIPFQGGADRGMSSREHNLIALLKNDDASTFVHDLGHFFLETNTCVARDLTAQP VENLTEQKQQFLFDVQTTLDWFGVKDLAAWDTMSLNEQCKNHEKWARGFEAYLYEGKAPS EELRGLFRRFRSWLKQVYHSLKNLNVELTDEVRSVFDRMFAGDEQIQQTQYINDMAPLSD NKT >gi|257257211|gb|ACDX02000025.1| GENE 13 12792 - 15047 2998 751 aa, chain - ## HITS:1 COG:NMB1622 KEGG:ns NR:ns ## COG: NMB1622 COG3256 # Protein_GI_number: 15677472 # Func_class: P Inorganic ion transport and metabolism # Function: Nitric oxide reductase large subunit # Organism: Neisseria meningitidis MC58 # 1 751 1 751 751 1340 96.0 0 MGQYKKLWYLLFAVLAVCFTILGYMGSEVYKKAPPYPERVVSASGTQLMTKDDILAGQSA WQTTGGMEVGSVLGHGAYQAPDWTADWLHRELAAWLDLTAQETYGKKFDEVSPEEQAVLK TRLADEYRNQSRIKEDGSVVISNTRVKAIESILPYYHGVYGDDPALQKTREHFAMKNNTL PSKEAREKLFNFFFWTSWSASTNRPDETFTYTNNWPHEPLINNVPTTENYMWSFTSVVLL LMGIGLLMWGYSFLTKHEEVEVPTEDPISKVQLTPSQKALGKYVFLTVALFVVQVLLGGL TAHYTVEGQGFYGIDEALGFEMSDWFPYALTRTWHIQSAIFWIATGFLTAGLFLAPIVNG GKDPKFQRAGVNFLYIALFIVVGGSYAGNFFALTHIIRPEFNFWFGHQGYEYLDLGRFWQ LLLMVGLLLWLFLMLRCTISAFKEKGVDKNLLAIFVASMVGVGVFYAPGLFYGEKSPIAV MEYWRWWVVHLWVEGFFEVFATAAFAFIFYNMGFVRRSTATASTLAAAAIFMLGGIPGTL HHLYFSGSTSASMAIGACFSALEVVPLVLLGREAYEHWSYQHLSDWAKRLRWPLMCFVAV AFWNMIGAGVFGFLINPPISLFYIQGLNTTAVHAHAALFGVYGFLALGFVLLVARYLKPN AHFDDKLMTWGFWLLNGGLVGMIVISLLPVGAIQAYASITHGLWYARSEEFLQMEILDTL RWVRTAADLIFIGGAICVAIQATKIVFSRDK >gi|257257211|gb|ACDX02000025.1| GENE 14 15522 - 16706 1611 394 aa, chain + ## HITS:1 COG:NMA1887 KEGG:ns NR:ns ## COG: NMA1887 COG2132 # Protein_GI_number: 15794775 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Putative multicopper oxidases # Organism: Neisseria meningitidis Z2491 # 1 369 1 363 386 601 89.0 1e-172 MKRQALAAIIASVFALAACGEQAAQKPAEQTASATATAEAPASSTQAAAETPAADLPVID AVTTHAPEVPPAIDRDHPARVRVKMETIEKTMKMDDGVEYHYWTFDGDVPGRMIRVREGD TVDIEFSNNPSSTVPHNVDFHAATGQGGGAEASFTAPGRTSTFSFKALQPGLYIYHCAVA PVGMHIANGMYGLILVEPKEGLPKVDKEFYIVQGDFYTKGKKGAQGLQPFDMDKAIAEQP EYVVFNGHVGAIAGDNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEAGKLIN ENVQSTLIPAGGAAIVEFKADIPGSYTLVDHSIFRAFNKGALGQLKVEGAENPEIMTKKL EDKAYVGSGAASAPAASAPADSAAAPASAASAGK >gi|257257211|gb|ACDX02000025.1| GENE 15 17143 - 17895 925 250 aa, chain + ## HITS:1 COG:NMB1624 KEGG:ns NR:ns ## COG: NMB1624 COG1262 # Protein_GI_number: 15677474 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis MC58 # 1 248 1 248 251 416 82.0 1e-116 MKLIPLIALFTLVASGSAAAAEMAKVEGGSYRPLYLKKETNLIKVKPFQIDKYPVTNAEF AEFVKKHPQWQKGKVSSKQAEPAYLKHWVKTGSNSYAPKPNELKHPVTNVSWFAANAYCT SQGKRLPTIDQWEFAGLASATQKNGSAEPGYNRTILDWYADGGRNGLHDVGKSKPNYWGI YDMHGLIWEWTEDFNSSLLASGNADTQMFCSGASVGSSDPSNYAAFLRYGIRTSLQSKYV LHNLGFRCAK >gi|257257211|gb|ACDX02000025.1| GENE 16 18148 - 19413 1330 421 aa, chain - ## HITS:1 COG:NMA1524 KEGG:ns NR:ns ## COG: NMA1524 COG0821 # Protein_GI_number: 15794418 # Func_class: I Lipid transport and metabolism # Function: Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis # Organism: Neisseria meningitidis Z2491 # 1 420 1 420 421 766 92.0 0 MNTPKRRQTHQVQIDHLIVGSDAPVVVQSMTNTDTADAEATALQVKELSDAGSEMVRITV NSPEAASKVAEIRQRLDDMGYTTPLIGDFHFNGERLLAEFPECGKALSKYRINPGNVGKG AKGDEKFAYMIRTAAENNKAVRIGVNWGSLDQSLAKRMMDANLASSSPKPPEEVMKEALI ISALESAEKAVLLGLPEDKIILSCKVSSVQDLIQVYRELGSRCQYPLHLGLTEAGMGSKG IVASTAALAVLLQEGIGDTIRISLTPEPGSSRTQEVIVGQEILQTMGLRSFTPMVTACPG CGRTTSTVFQELAQDVQNYLRQKMTVWRTVYPGVESLNVAVMGCVVNGPGESKLADIGIS LPGTGETPVAPVYVDGERKVTLKGDNIAAEFLEIVEEYVKTNYCEGGAKRSQNRIIPIQS A >gi|257257211|gb|ACDX02000025.1| GENE 17 19416 - 20288 910 290 aa, chain - ## HITS:1 COG:no KEGG:mma_2128 NR:ns ## KEGG: mma_2128 # Name: not_defined # Def: hypothetical protein # Organism: M.massiliensis # Pathway: not_defined # 16 271 30 328 343 77 26.0 6e-13 MENQKKNEYDIQAAKSLGDELGQLRQKSGWDIDEVARRLKLSAEQIEALEKGDYSFFSGL VFVMGYLRSYARLLKIDEASITGRLKAISAPEEDHVYLVDRKQNTGLNYQDGEKVGFPKW VLGVAALILLGGGIYVWQSKSNHENEQQVAQNSDAVRNSMQTPDLKKENIAVSNMAENGK QEVSNDEKAASSVAASEVAASEPEVKVDSDELWIKVQYRSNLIITDKKGTMIFSRIIPAG SEKRFKGGAPYNVWIGIAAGAQANYGGTTINPAEYRAAGEKSASFVAGKK >gi|257257211|gb|ACDX02000025.1| GENE 18 20293 - 21048 866 251 aa, chain - ## HITS:1 COG:NMB1309 KEGG:ns NR:ns ## COG: NMB1309 COG3063 # Protein_GI_number: 15677175 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein PilF # Organism: Neisseria meningitidis MC58 # 9 251 11 253 253 368 77.0 1e-102 MKLNIWQPIILTLVLGACAGPKVPSRAERATQVANIKTQLAIEYMRGGDYRQATVSIEEA LKADSSNEDAWLVRAQIYQYLKVRDKAQESFQKALSLKPDNAEINNNYGWFLCSEMNNPA QSISYFDKALADPTYPSPFIANLNKGICSAKMGQYSLAEAYLERSLAAQPQFPPAFKELA RTKMLAGNLNEADYYFRQYQSKVDVLQADDLLLGWKLATALGNSQAAYEYEAQLRANFPY SEQLQAVTTGK >gi|257257211|gb|ACDX02000025.1| GENE 19 21051 - 22145 1192 364 aa, chain - ## HITS:1 COG:NMB1308 KEGG:ns NR:ns ## COG: NMB1308 COG0820 # Protein_GI_number: 15677174 # Func_class: R General function prediction only # Function: Predicted Fe-S-cluster redox enzyme # Organism: Neisseria meningitidis MC58 # 1 363 1 363 364 719 94.0 0 MKTNLLNYDLNGLTHHFAEMGEKPFRAKQVMRWIHQAGAQSFDEMTDLAKSLRLKLNEQA SVDVPKLMMAQESSDGTRKWLLDVGTGNGVETVFIPEAERGTLCISSQVGCALECTFCST GRQGFNRNLTAAEIIGQLWWANKAMGVTPKNERVISNVVMMGMGEPMANFDNVVTALSIM LDDHGYGLSRRRVTVSTSGMVPQMDRLRDAMPVALAVSLHASNDEVRDQIVPLNKKYPLK ELMAACQRYLVKAPRDFITFEYVMLDGINDKAQHARELIELVKDVPCKFNLIPFNPFPNS GYERSTNENIRVFRDILQQAGFVVTVRKTRGDDIDAACGQLAGQVQDKTRRQQKWQQILV EQQS >gi|257257211|gb|ACDX02000025.1| GENE 20 22411 - 22836 567 141 aa, chain - ## HITS:1 COG:NMA1521 KEGG:ns NR:ns ## COG: NMA1521 COG0105 # Protein_GI_number: 15794415 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside diphosphate kinase # Organism: Neisseria meningitidis Z2491 # 1 141 1 141 141 237 85.0 6e-63 MAIERTISIVKPDAVGKNVIGKIYSRFEDNGLRIVAAKMKHLSVREAQEFYAVHKERPFY DSLVAFMTSGPVMIQVLEGENAVAKNRELMGATNPAEAAPGTIRADFAESLSVNAVHGSD SLENAAIEIAYFFSQSEICPR >gi|257257211|gb|ACDX02000025.1| GENE 21 22955 - 24091 926 378 aa, chain - ## HITS:1 COG:NMA1520 KEGG:ns NR:ns ## COG: NMA1520 COG1485 # Protein_GI_number: 15794414 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Neisseria meningitidis Z2491 # 1 376 1 376 383 707 90.0 0 MSDRGQLFVAPPFENHSPLTWYQAAAEQPNFIRDEAQARAIEYLDRLWTELMMFKRKRNR FLGRSLRSPQVPKGLYFYGGVGRGKSFLMDAFFGCLPYRRKRRVHFHAFMAEIHKRLKDL KSEANPLKAVAAEIAKETRVLCFDEFHVSDIADAMILGRLLENLLSEGVVLVATSNYAPS ELYPQGQNRSSFLPTIALIESSLTVLNVDGGEDYRLRTLRPAEIFFVPNNEENEQKLADL FKEMAGISELNPGVSVIHRREIPHKAQSDRAIWFDFRALCFGPRSQADYLYLAEHYEMVF VSGLERLTPQEKAEARRLTWLIDVLYDFRVKLCATSAVGVNDIYVEGDFAEEFTRTASRM VEMQSEVYLEQPHLTLKK >gi|257257211|gb|ACDX02000025.1| GENE 22 24292 - 24588 291 98 aa, chain - ## HITS:1 COG:NMA1516 KEGG:ns NR:ns ## COG: NMA1516 COG0776 # Protein_GI_number: 15794410 # Func_class: L Replication, recombination and repair # Function: Bacterial nucleoid DNA-binding protein # Organism: Neisseria meningitidis Z2491 # 1 98 7 104 104 173 95.0 8e-44 MVRLAEVFAEKNGNQLLAKDVEYSVKVLVDTMTRSLARGQRIEIRGFGSFDLNHRPARIG RNPKTGERVEVPEKHVPHFKPGKELRERVDLALQENAN >gi|257257211|gb|ACDX02000025.1| GENE 23 24617 - 26296 2788 559 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|241758882|ref|ZP_04756995.1| ribosomal protein S1 [Neisseria flavescens SK114] # 1 559 1 559 559 1078 99 0.0 MENFAQLLEESFTLQEMNPGEVITAEVVGIDQNFVTVNAGLKSESLIDVAEFKNAQGEIE VKVGDFVTVTIESVENGFGETKLSREKAKRAADWIALEEAMENGDILSGVINGKVKGGLT VMINSIRAFLPGSLVDVRPVKDTSHFEGKEIEFKVIKLDKKRNNVVVSRRAVLEATLGEE RKALLENLQEGSIIKGIVKNITDYGAFVDLGGIDGLLHITDLAWRRVKHPSEVLEVGQEV EAKVLKFDQDKQRVSLGMKQLGEDPWSGLTRRYPQGTRLFGKVSNLTDYGAFVEIEQGIE GLVHVSEMDWTNKNVHPSKVVQLGDEVEVMILEIDEDRRRISLGMKQCQANPWEEFAANH NKGDKISGAVKSITDFGVFVGLPGGIDGLVHLSDLSWTEAGEEAVRKYKKGEEVEAVVLA IDVDKERISLGIKQLEGDPFGNFISVNDKGSLVKGSVKSVDAKGAVVALSDEVEGYLPAS EFAADRVEDLTTKLKEGDEVEAVIVTVDRKNRSIRLSVKAKDAKENREALNSVNAAATAS AGTTSLGDLLKAKLSGDQE >gi|257257211|gb|ACDX02000025.1| GENE 24 26458 - 27117 728 219 aa, chain - ## HITS:1 COG:NMB1300 KEGG:ns NR:ns ## COG: NMB1300 COG0283 # Protein_GI_number: 15677166 # Func_class: F Nucleotide transport and metabolism # Function: Cytidylate kinase # Organism: Neisseria meningitidis MC58 # 4 219 3 218 218 310 79.0 9e-85 MNTKQKVIAVDGPSASGKGTVASRVAQALGFDYLDSGALYRLTALYAKKRDVEWSDEEAV AALAENLPARFEGTQVFLEDEDVSGQIRSEAIGMGASAVAQLPKVRAALLQRQRDFLTEK GLVADGRDMGSVVFPDAALKIFLTAGAKIRAERRAKQIGIPCEGLEFERILSDIEARDEA DRRRSVAPLRQLPDAELLDTSGLSIEEAVKKVLDWYHKV >gi|257257211|gb|ACDX02000025.1| GENE 25 27356 - 27709 286 117 aa, chain - ## HITS:1 COG:RSc2265 KEGG:ns NR:ns ## COG: RSc2265 COG2801 # Protein_GI_number: 17546984 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Ralstonia solanacearum # 1 112 153 265 269 110 53.0 4e-25 MVKEMLEKAAPRLTDKGTMLHSDQGVLYRTAGYRELLAQHSMVQSMSRKANCWDNAPMES FFAVLKTECFYRAGELTVDELMKQIDDYMDYYNRERCSLKLKKLSPVAYRTQLAQSA Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:20:31 2011 Seq name: gi|257257209|gb|ACDX02000026.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont25.1, whole genome shotgun sequence Length of sequence - 26003 bp Number of predicted genes - 18, with homology - 18 Number of transcription units - 14, operones - 4 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 30 - 197 293 ## COG2960 Uncharacterized protein conserved in bacteria - Prom 233 - 292 5.1 2 2 Tu 1 . - CDS 703 - 2214 1900 ## COG0661 Predicted unusual protein kinase - Prom 2242 - 2301 2.2 3 3 Tu 1 3/0.200 + CDS 2731 - 4257 1809 ## COG0591 Na+/proline symporter + Term 4263 - 4311 11.1 + Prom 4280 - 4339 6.7 4 4 Tu 1 . + CDS 4533 - 8138 5126 ## COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase - Term 8603 - 8653 9.0 5 5 Tu 1 . - CDS 8659 - 9189 781 ## COG3028 Uncharacterized protein conserved in bacteria - Prom 9212 - 9271 6.2 + Prom 9171 - 9230 5.7 6 6 Op 1 . + CDS 9363 - 10694 1903 ## COG0312 Predicted Zn-dependent proteases and their inactivated homologs 7 6 Op 2 . + CDS 10781 - 11962 1249 ## COG0438 Glycosyltransferase + Term 12061 - 12111 1.1 + Prom 12154 - 12213 5.1 8 7 Op 1 . + CDS 12298 - 13302 1412 ## COG0042 tRNA-dihydrouridine synthase + Term 13331 - 13375 9.1 9 7 Op 2 . + CDS 13389 - 14000 720 ## COG2365 Protein tyrosine/serine phosphatase + Term 14061 - 14116 4.5 - Term 14196 - 14247 15.1 10 8 Tu 1 . - CDS 14283 - 15101 1180 ## COG1045 Serine acetyltransferase - Prom 15131 - 15190 2.7 + Prom 15339 - 15398 3.6 11 9 Op 1 29/0.000 + CDS 15433 - 16005 870 ## COG0576 Molecular chaperone GrpE (heat shock protein) + Prom 16138 - 16197 4.3 12 9 Op 2 . + CDS 16309 - 18240 2946 ## COG0443 Molecular chaperone + Term 18252 - 18306 11.2 + Prom 18327 - 18386 2.5 13 10 Tu 1 . + CDS 18419 - 19951 2391 ## COG0433 Predicted ATPase + Term 19969 - 20022 16.1 - Term 20275 - 20315 9.9 14 11 Tu 1 . - CDS 20355 - 21047 436 ## Ssed_2205 hypothetical protein - Prom 21182 - 21241 5.0 - Term 21124 - 21179 -0.4 15 12 Tu 1 . - CDS 21302 - 23338 3557 ## COG0339 Zn-dependent oligopeptidases 16 13 Op 1 . - CDS 23584 - 24450 1434 ## Varpa_1581 hypothetical protein 17 13 Op 2 . - CDS 24482 - 25333 950 ## COG0668 Small-conductance mechanosensitive channel - Prom 25507 - 25566 6.4 + Prom 25529 - 25588 4.0 18 14 Tu 1 . + CDS 25634 - 25969 472 ## FTN_0764 hypothetical protein Predicted protein(s) >gi|257257209|gb|ACDX02000026.1| GENE 1 30 - 197 293 55 aa, chain - ## HITS:1 COG:NMA2081 KEGG:ns NR:ns ## COG: NMA2081 COG2960 # Protein_GI_number: 15794957 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 55 12 66 117 89 90.0 1e-18 MFGKQLFEEVSAKISETIANSPAKDMEKNVKAMLGSAFNRMDLVTREEFDIQQQV >gi|257257209|gb|ACDX02000026.1| GENE 2 703 - 2214 1900 503 aa, chain - ## HITS:1 COG:NMB0559 KEGG:ns NR:ns ## COG: NMB0559 COG0661 # Protein_GI_number: 15676464 # Func_class: R General function prediction only # Function: Predicted unusual protein kinase # Organism: Neisseria meningitidis MC58 # 1 488 1 488 503 912 92.0 0 MKRLKRIKTILRTLYLYHLAELFAALVRPGWARTLLKMLPQSSEFENEPPAVRLRLALES LGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDAQLSRSQIEKSLGQSIETLYAE FETEPVASASIAQVHKARLHSGEQVAVKVLRPNLLPVIEQDLSLMRFGAAWVERLFADGK RLKPREVVAEFDKYLHDELDLMREAANASQLRRNFQNSNMLIVPKVFYDYCTSDVLTIEW MDGTPVSEIAKLKADGIDLHKLADYGVEIFFTQVFRDGFFHADMHPGNILVAADNRYIAL DFGIVGTLTDYDKRYLAINFLAFFNRDYHRVATAHIESGWVPADTRAEELEAAVRAVCEP VFNKPISQISFGLVLMRLFEVSRRFNVEIQPQLVLLQKTLLNIEGLGRQLDPDLDLWKTA KPFLVKWMNEQVGPKAFLRNLKNEAPDWAQIIPSLPRKISALVDENRQQEMRDAYIHLVK VQQRQSMWLGVIAVTLLLILLFD >gi|257257209|gb|ACDX02000026.1| GENE 3 2731 - 4257 1809 508 aa, chain + ## HITS:1 COG:NMA2083 KEGG:ns NR:ns ## COG: NMA2083 COG0591 # Protein_GI_number: 15794958 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Na+/proline symporter # Organism: Neisseria meningitidis Z2491 # 1 508 1 508 508 855 94.0 0 MNPMYITFAIYLVAVLLIGLAAYFSTRNFDDYILGGRSLGPFVTAMSAGASDMSGWLLMG LPGAIYLSGLNEAWIAIGLVVGAYFNWLLVAGRLRVHTEYANNALTLPDYFFHRFGAGGH LMKVVSALIILFFFTIYCASGIVAGATLFQSLFEGMTYNQAMWLGAGATIAYTFLGGFLA VSWTDTLQASLMIFALILTPVMVYLGLGGADQMSAAIQNVAAGTGKEYDSLFAGTTVIGI ISTAAWGLGYFGQPHILARFMAAESAKSLVSARRIGMTWMVLCLAGAVAVGYFGIAYFGA NPDQVASMKGNHERIFIALSTLLFNPWIAGIILSAILAAVMSTLSCQLLVCSSAITEDFY KGFLRKNAPQSELVWVGRLMVLAIAIISILIASDPESKVLGLVSYAWAGFGAAFGPVVIL SVLWKRITAYGALSGMIAGALTVVAWAEWVKKPALAAHETGLLTMYEIVPGFIACLVVAI VVSLTDKEPSREIQERFEKADAEYREAK >gi|257257209|gb|ACDX02000026.1| GENE 4 4533 - 8138 5126 1201 aa, chain + ## HITS:1 COG:NMA2084_2 KEGG:ns NR:ns ## COG: NMA2084_2 COG4230 # Protein_GI_number: 15794959 # Func_class: C Energy production and conversion # Function: Delta 1-pyrroline-5-carboxylate dehydrogenase # Organism: Neisseria meningitidis Z2491 # 438 1201 1 764 764 1353 90.0 0 MFDFAFPTQTPLRQAITDAYRRDEIEAVQDMLQRAQMSDEERRAASELARRLVTQVRASR TKASGVDALMHEFSLSSEEGIALMCLAEALLRIPDNATRDRLIADKISEGNWKSHLNNSP SLFVNAAAWGLLVTGKLTATNDKQMGSALNRLISKGGAPLIRQGVNYAMRLLGKQFVTGQ TIEEALQNGKEREKMGYRFSFDMLGEAAFTQEDADRYYNDYVQAIHAIGKDAAGQGVYEG NGISVKLSAIHPRYSRAQHERVMSELLPRLKELFLLGKKYDIGINIDAEEANRLELSLDL MEALVSDPDLAGYKGIGFVVQAYQKRCPFVIDYLIDLARRNNQKLMIRLVKGAYWDSEIK WAQVDGLDGYPTYTRKVHTDISYLACARKLLDAQDAVFPQFATHNAYTLGAIYQMGKGKD FEHQCLHGMGETLYDQVVGPQNLGRRVRVYAPVGTHETLLAYLVRRLLENGANSSFVNQI VDENISIDTLIRSPFDTIAEQGIHLHNALPLPRDLYGKGRLNSQGVDFSNETVLQQLQEK LNRSAAQDFHAASIINGKARDVGEAQPIKNPADHDDIVGTVSFADAALAQEAIGAAVAAF PEWSATPAAERANCLRRFADLLEQHTPALMMLAVREAGKTLNNAVAEVREAVDFCRYYAN EAENTLPKEAKAVGAIVAISPWNFPLAIFTGEVVSALAAGNTVIAKPAEQTSLIASYAVS LMHEAGIPTSALQLVLGAGDVGAALTGDPRIGGVIFTGSTEVAQLINKALAKRDDSPVLI AETGGQNAMIVDSTALPEQVCLDVLNSAFDSAGQRCSALRILCVQEDVADKMLAIIKGAM DELVVGKPVQLTTDVGPVIDSEAQQNLQSHINKMKGIAKSYHEVKAASDVDPAKSTFVLP ILFELNNLNELTREVFGPVLHVVRYRADELDQIIDQINSKGYALTSGVHSRIEGTVKRIR ERIEAGNVYVNRNIVGAVVGVQPFGGHGMSGTGPKAGGSFYLQKLTRIPEWVAPPLSRIG QADEAALKRLEALIHKLPFNAEEKKSAASALGHARIRTLRQAESVLVGPTGERNALSWRA PKRVWVHGGSLLQAFCALTELAAAGIVTVVEPDSPLTAYTADLEGLLQVNSKPESTGVNH VAALSPLDSSRKQELAKRDGALIRILPSEQGLDILQVFEEISCSVNTTAAGGNASLMAVA D >gi|257257209|gb|ACDX02000026.1| GENE 5 8659 - 9189 781 176 aa, chain - ## HITS:1 COG:NMA1049 KEGG:ns NR:ns ## COG: NMA1049 COG3028 # Protein_GI_number: 15794000 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 162 22 183 191 270 91.0 9e-73 MFENEDEWVSKTQMKKQMNDLQALGMELTKLSTDTLKKIGLDEDLYEAVVTYKKITSNGA LKRQSQFIGRLMRDTDPAPIEAFLAKLRGENTAHNAFLQRVEQARTRLLADDNALTQFMA DFPHADAGKLRTLIRNTKKEQEQNKPPKNFRALFQEIKSVMEGGQSDSEETQDWEE >gi|257257209|gb|ACDX02000026.1| GENE 6 9363 - 10694 1903 443 aa, chain + ## HITS:1 COG:NMB0839 KEGG:ns NR:ns ## COG: NMB0839 COG0312 # Protein_GI_number: 15676735 # Func_class: R General function prediction only # Function: Predicted Zn-dependent proteases and their inactivated homologs # Organism: Neisseria meningitidis MC58 # 1 442 1 442 443 759 87.0 0 MLFNHTASELTGLCGHALDLAKNMGAAAAEADFSESIGQSVSVRLGEIEQIEFQQDKSLD ITVYVGKRKGRASTADFSEKALQDTVKAAIDIARYTAEDDCAGLADASLMAQHVGDLDRY HEWDLSTEAAIELAKQCEQAALSADERIENSEGAGVQTGHYQYVYGNTHGFTAHQQGTRH SISCSIVAADENGMQRDYWYDAACRHQDMDSPEQIGKTAAERTLRRLNSRSIPTGNYPVL FDTTVAGGLIGHLVGALSGGALYRQSSFLIDSIGRKVLPDFLSLREEPHIPRAFGSTYFD SEGVATQPRFVIRDGIVEGYFLSSYSARKLGMQTTGNAGGAHNLYLNHTHETQSDLLKEM GTGLLVTELMGQGVNTITGDYSRGAAGFWVENGIISHPVQEITIAGRLQDMYLGIVGTAN DALRRSSNKIGSMLIESMTVAGE >gi|257257209|gb|ACDX02000026.1| GENE 7 10781 - 11962 1249 393 aa, chain + ## HITS:1 COG:NMA1057 KEGG:ns NR:ns ## COG: NMA1057 COG0438 # Protein_GI_number: 15794006 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Neisseria meningitidis Z2491 # 191 392 6 208 230 221 58.0 2e-57 MHVAVIPSWYPKTETDVDGIFFRLQAQALQRKGLKVGVIAPMFRYLRVHTKSIFTGPYGI RKHNQGGLNTYAYDSMYFFPRFPVVDLDRIRWVRAGMKAFARYVRENGRPDIVHAHSMNY AGILAYEIYKTYGIPYVITEHSSTITRNLIRPHQWPIMRLAAEHSAARFAVSRDFSRLLK EKYGLEWEYLPNVLGDNFARDFTFPDKGNQDYTFCTVSHLRHLKGHDLLLPAFAKALGKY PFLKLKIGGDGVEAANLRRLAQELGITHAVSFLGALTTDEVLDLMRQSDAFVLASRTETF GVVFIEALSQGLPVIATMCGGPQSIVTPENGILVPTENIPALTDALIEMYENRERFDHEK LRRDCLAEFSEEVIASSLIRTFEKIVGEKQKQP >gi|257257209|gb|ACDX02000026.1| GENE 8 12298 - 13302 1412 334 aa, chain + ## HITS:1 COG:NMB0348 KEGG:ns NR:ns ## COG: NMB0348 COG0042 # Protein_GI_number: 15676263 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-dihydrouridine synthase # Organism: Neisseria meningitidis MC58 # 6 334 8 336 336 652 96.0 0 MPQTNLPPRRLSVAPMLDWTDRHYRYLARQITRNTWLYSEMVNSGAIVYGDKDRFLMFNE GEQPVALQLGGSDPSDLAKAAKAAEEYGYNEVNLNCGCPSPRVQKGSFGACLMNEVMLVA DCLNAMQDAVQIPVTVKHRIGVDRQIEYQTVADFVGTLRDKTACKTFIVHARNAWLDGLS PKENRDVPPLKYDYVYRLKQEFPELEIIINGGITTNEAIAGHLQHVDGVMVGREAYHNPM VMHEWDRLFYGDTRSPIEYADLVQRLYTYSQTQIQAGRGTILRHIVRHSLGLMHGLKNAR TWRRMLSDATLLKDNDGSLILEAWKEVERANVWE >gi|257257209|gb|ACDX02000026.1| GENE 9 13389 - 14000 720 203 aa, chain + ## HITS:1 COG:PA3885 KEGG:ns NR:ns ## COG: PA3885 COG2365 # Protein_GI_number: 15599080 # Func_class: T Signal transduction mechanisms # Function: Protein tyrosine/serine phosphatase # Organism: Pseudomonas aeruginosa # 25 165 30 168 218 97 35.0 1e-20 MMKRTIPIIFSAFLLAACQASSTQETRTMNTRLWAVSVKQDANLYRIDDKLYRSEQPVPE DGETISQQGIKSVVNLRFFDRNDDDYLKQYGINIINRPLLSWNVKPKDIAEILYLIEKQQ QNGAVLIHCYHGADRTGLIAGMYRILYQGWQIEEAKAEMQHGPYGYHSIWKNIANLFTEA KIQEVKNHLERLRSNERNAVSEQ >gi|257257209|gb|ACDX02000026.1| GENE 10 14283 - 15101 1180 272 aa, chain - ## HITS:1 COG:NMA0742 KEGG:ns NR:ns ## COG: NMA0742 COG1045 # Protein_GI_number: 15793718 # Func_class: E Amino acid transport and metabolism # Function: Serine acetyltransferase # Organism: Neisseria meningitidis Z2491 # 1 272 1 272 272 495 89.0 1e-140 MKKDHLNTTDFNLWHTIREETAAAAAAEPMLASFLHQTVLRHDSLDSVLAYHLSSKLGSP IMDVRALFEIYQQALGSDARIGNCVEADLKAIYERDPACDEYSLPLLYFKGFHAIQAHRI NHWLYQNGRKTLAYFLQNRMSEVFGVDIHPAARFGHGLMLDHATGFVAGETAVLGNNISI LHGVTLGGSGKECGDRHPKIGDGVMIGANASILGNIRIGDNSKIGAGSVVVADVPSSITV VGVPAKPVGRSVKTPAADMDQSLQGVAMDFVI >gi|257257209|gb|ACDX02000026.1| GENE 11 15433 - 16005 870 190 aa, chain + ## HITS:1 COG:NMA0744 KEGG:ns NR:ns ## COG: NMA0744 COG0576 # Protein_GI_number: 15793719 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone GrpE (heat shock protein) # Organism: Neisseria meningitidis Z2491 # 1 190 1 192 192 220 76.0 2e-57 MTEHNEPQQTETEIETAAEVETAEAVETEQTETQPEAPTYEELQARIAELEGQLKDSELR GLANEQNLRRRHQQEIADTHKFAGQKFAAEMLPVKDYLEMALLDQSGNFDALKMGVQMTL NELQKAFDTTHIKEINPQPGDKLDPHQHQAMQAVVSEQEPNTIVSVMKKGYTLSDRVLRP AMVIVAKKEA >gi|257257209|gb|ACDX02000026.1| GENE 12 16309 - 18240 2946 643 aa, chain + ## HITS:1 COG:NMA0736 KEGG:ns NR:ns ## COG: NMA0736 COG0443 # Protein_GI_number: 15793712 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Neisseria meningitidis Z2491 # 1 643 1 642 642 1042 97.0 0 MAKVIGIDLGTTNSCVSISENGQTKVIENAEGARTTPSVVAYLDGGEVLVGAPAKRQAVT NAKNTIYAVKRLIGHKFEDKEVQRDIESMPFEIIKANNGDAWVKAQGKELSPPQVSAEVL RKMKEAAESYLGEKVTEAVITVPAYFNDSQRQATKDAGRIAGLDVKRIINEPTAAALAFG MDKGDNKDRKVAVYDLGGGTFDISIIEIANLDGDKQFEVLATNGDTFLGGEDFDQRLIDH IIAEFKKEQGIDLKQDVMALQRLKEAAEKAKIELSSGQQTEINLPYITMDATGPKHLAMK ITRAKFESLVEDLIARSIEPCRTALKDAGLSTSDIDDVILVGGQSRMPKVQEAVKDFFGK EPRKDVNPDEAVAVGAAIQGEVLSGGRSDVLLLDVTPLSLGIETMGGVMTKLIQKNTTIP TKASQVFSTAEDNQSAVTIHVLQGERERASANKSLGQFNLGDIAPAPRGMPQIEVTFDID ANGILHVSAKDKGTGKAANITIQGSSGLSEEEIERMVKDAEANAEEDKKLTELVASRNQA EALIHSVKKSLADYGDKLDATEKEKIEAALKEAEEAVKGDDKAAIDAKAEALGTASQKLG EMVYAQAQAEAQAGESAQAEPSSAKKDDDVVDADFEEVKDDKK >gi|257257209|gb|ACDX02000026.1| GENE 13 18419 - 19951 2391 510 aa, chain + ## HITS:1 COG:PM1435 KEGG:ns NR:ns ## COG: PM1435 COG0433 # Protein_GI_number: 15603300 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Pasteurella multocida # 12 505 12 498 499 608 65.0 1e-174 MTTFPIARAGDKTLEIQGKMANRHGLIAGATGTGKTVTLRRMAEAFSSEGVPVFLVDVKG DLSGIAQAGAASGKVGERIAEFGLGEQWLQSFPVRFWDVYGETGIPVRVTVSEMGPLLLA RLMNLNDTQEGLLNLVFKVADDKGWHILDLKDLRSMLKHVSDHASEYRTQYGNVSAASIG AIQRQLLTLENEGAEKFFGEPSLNLQDWMQTDNGKGVINVLNSEKLMRSPRMYSAFLLWM LAELFETLPEVGDLDKPKFVMFFDEAHLMFDNAANALVEQVEQVVRLIRSKGVGVYFVTQ NPLDLPDTILGQLGNRVQHALRAFTPRDQKAVKAAAETFRSNPNIKVAEAIAELGVGEAL VSFLDEKGMPEPVERALVLPPQSALTPLAAEERNRLFQNDDLYPTYKDMVDNYSAFEALA EADSQVEAEKEAAAAAKGQEKAQKAAEKEAANADPGILGGLLGGLSGGRKKSGQGLGYNV ADAIGSQINRQVTNAISRSVMGIIKNMFKK >gi|257257209|gb|ACDX02000026.1| GENE 14 20355 - 21047 436 230 aa, chain - ## HITS:1 COG:no KEGG:Ssed_2205 NR:ns ## KEGG: Ssed_2205 # Name: not_defined # Def: hypothetical protein # Organism: S.sediminis # Pathway: not_defined # 4 214 3 218 219 256 58.0 5e-67 MTKYTAPYFYKDAFNCPYCGAFAHMQWVSYEPDVYYKAICAHCEQYSFWRVTETNLTGLE LRRKGEMLYPDFGSAPLPAEDMPEDVKKDYEEAARIFIKSPRGAAALLRLGLQKLCIHLG EEGKNINTDIRSLVKKEVLSGQVVKVADTLRITGNNAVHPGQIVDEDFDKVAAKMFDLIN FIVKKAITEPKELDELYQLMPENARTAAEAQDKRNLQNQVQNPPSSPTQK >gi|257257209|gb|ACDX02000026.1| GENE 15 21302 - 23338 3557 678 aa, chain - ## HITS:1 COG:NMA0054 KEGG:ns NR:ns ## COG: NMA0054 COG0339 # Protein_GI_number: 15793085 # Func_class: E Amino acid transport and metabolism # Function: Zn-dependent oligopeptidases # Organism: Neisseria meningitidis Z2491 # 1 678 1 678 678 1272 94.0 0 MTDNVLLHLGEEPRFDAIQTADIKPALQTAIAEARAQIAEVKAQTHTDWANTVERLTGIT ERVGRIWGVMSHLNSVVDTPELRAVYNELMPEITVFFTEIGQDIELYNRFKTIKNSPEFD TLSPAQKTKLNHDLRDFVLSGAELPPEQQAELAQLQTEGAQLSAKFSQNVLDATDAFALY FDDAAPLAGIPEDSLAMFAAAAQSEGKTGYKIGLQIPHYLAVIQYADNRKLREQIYRAYV TRASELSDDGKFDNTANIDRTLENALQTAKLLGFKNYAELSLATKMADTPEQVLTFLHDL ARRAKPYAEKDLAEVKAFARESLNLADPQPWDLSYASEKLREAKYAFSETEVKKYFPVSK VLAGLFAQIKKLYGIGFAEKTVPVWHKDVRYFELEQNGKTIGGVYMDLYAREGKRGGAWM NDYKGRRRFADGTLQLPTAYLVCNFTPPVGGKEARLSHDEILTLFHETGHGLHHLLTQVD ELGVSGINGVEWDAVELPSQFMENFVWEYDVLAQMSAHEETGEPLPKELFDKMLAAKNFQ RGMFLVRQMEFALFDMTIYSEDNEGRLKNWPQVLDSVRKEVAVIQPPEYNRFANSFGHIF AGGYSAGYYSYAWAEVLSADAYAAFEESDDVAATGKRFWQEILAVGGSRSAAESFKAFRG REPSIDALLRHSGFDNAA >gi|257257209|gb|ACDX02000026.1| GENE 16 23584 - 24450 1434 288 aa, chain - ## HITS:1 COG:no KEGG:Varpa_1581 NR:ns ## KEGG: Varpa_1581 # Name: not_defined # Def: hypothetical protein # Organism: V.paradoxus_EPS # Pathway: not_defined # 1 286 1 285 285 359 59.0 7e-98 MLPESALTQMYPVIMTPSHDGKYFHNYVLSLLNIVNTSAQNGWPLQVMMQRGESLITRAR NNCVATFLENKEWTHLFWIDSDIGFSAEAFYRLLLADKDVVAGIYPLKRENWPDEGVPAG TTQADFERMYTAYTVNTGDKNENGEIVLRVDEEGFMKVDDAPTGFMVIKRSVFEKMMAAY PELNYISDSDYKREDKGLHYRFFDCMVDPESKRYLSEDYTFCRLWQQISGEVYVDVQSNL THQGAKIYRGAFADSLQTNIAQAVFAPAGTPMSLDLAAPLKSNPRGAE >gi|257257209|gb|ACDX02000026.1| GENE 17 24482 - 25333 950 283 aa, chain - ## HITS:1 COG:NMA0055 KEGG:ns NR:ns ## COG: NMA0055 COG0668 # Protein_GI_number: 15793086 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Neisseria meningitidis Z2491 # 1 280 41 320 328 398 77.0 1e-111 MWDTVRQWLHTLPVREEVVESVLMVVALLVLRGVLLNLYLRRHPHYSIEEKRRSLVLSRN LTLILTILGLAVIWATQIQTLALSMFAVAAAIVVATKELIMCLSGSILRSVTKQYSVGDY IEVDGLRGRVVDINLLNTLMMQIGPNPLVGQLSGKTLSFPNSLLLNHSVRRDNILGDYVI HTVEIPVPIHLDSDEIVGRLKAVLEPLCRPYVPAIQQHLDNVQAEKLFITPAAQPRVTRV PHDDKVYLIIVRYASPVAKRLEIQQAVIDEFLRVQYRLLNPQA >gi|257257209|gb|ACDX02000026.1| GENE 18 25634 - 25969 472 111 aa, chain + ## HITS:1 COG:no KEGG:FTN_0764 NR:ns ## KEGG: FTN_0764 # Name: not_defined # Def: hypothetical protein # Organism: F.tularensis_U112 # Pathway: not_defined # 3 111 4 113 117 106 74.0 4e-22 MTCKIHDHHDHTHGAGCGHTAIKHDDHTDYLHDGHLHHEHNGHYDEHSLSVNETNPDGCH PVDTCQGHVHGEGCGHEAVPHGDHTDYIVNGRLHHQHGDHCDDHGPVEIVK Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:20:52 2011 Seq name: gi|257257208|gb|ACDX02000027.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont26.1, whole genome shotgun sequence Length of sequence - 24956 bp Number of predicted genes - 20, with homology - 20 Number of transcription units - 14, operones - 5 average op.length - 2.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 90 - 410 431 ## COG3293 Transposase and inactivated derivatives 2 1 Op 2 . - CDS 464 - 883 356 ## Aasi_1471 hypothetical protein - Prom 918 - 977 3.6 - Term 946 - 1009 3.0 3 2 Tu 1 . - CDS 1040 - 1249 146 ## COG0236 Acyl carrier protein - Prom 1285 - 1344 3.8 - Term 1405 - 1456 12.1 4 3 Op 1 2/0.333 - CDS 1506 - 1676 301 ## COG1773 Rubredoxin 5 3 Op 2 4/0.000 - CDS 1764 - 2852 1861 ## COG1960 Acyl-CoA dehydrogenases - Term 2932 - 2992 16.1 6 3 Op 3 . - CDS 3004 - 3552 881 ## COG2128 Uncharacterized conserved protein - Prom 3586 - 3645 2.6 - Term 3648 - 3708 18.9 7 4 Tu 1 . - CDS 3734 - 5425 2388 ## COG0277 FAD/FMN-containing dehydrogenases + Prom 5816 - 5875 5.5 8 5 Tu 1 . + CDS 6086 - 9919 4900 ## COG0277 FAD/FMN-containing dehydrogenases + Term 9930 - 9972 11.1 - Term 10124 - 10174 16.2 9 6 Op 1 . - CDS 10232 - 11893 2057 ## COG0644 Dehydrogenases (flavoproteins) - Prom 11923 - 11982 6.0 - Term 11961 - 12009 10.5 10 6 Op 2 . - CDS 12046 - 12951 1486 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin - Prom 12984 - 13043 6.2 - Term 13553 - 13591 7.0 11 7 Tu 1 . - CDS 13603 - 14331 1184 ## COG0217 Uncharacterized conserved protein - Prom 14385 - 14444 5.7 + Prom 14503 - 14562 7.6 12 8 Tu 1 . + CDS 14703 - 16121 878 ## PROTEIN SUPPORTED gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 + Term 16139 - 16176 8.0 - Term 16127 - 16164 8.0 13 9 Tu 1 . - CDS 16184 - 16669 248 ## COG1495 Disulfide bond formation protein DsbB - Prom 16891 - 16950 5.5 + Prom 16991 - 17050 4.7 14 10 Tu 1 . + CDS 17147 - 17416 444 ## PROTEIN SUPPORTED gi|225075799|ref|ZP_03718998.1| hypothetical protein NEIFLAOT_00815 + Term 17431 - 17466 4.2 - Term 17456 - 17506 11.1 15 11 Tu 1 . - CDS 17530 - 18021 768 ## COG0782 Transcription elongation factor - Prom 18086 - 18145 4.0 - Term 18156 - 18217 7.5 16 12 Tu 1 . - CDS 18248 - 19768 1289 ## NGK_2582 hypothetical protein - Prom 19955 - 20014 7.6 + Prom 20236 - 20295 6.0 17 13 Op 1 . + CDS 20354 - 21349 952 ## NMC1946 haemoglobin-haptoglobin-utilization protein + Term 21428 - 21462 -0.2 + Prom 21370 - 21429 2.8 18 13 Op 2 . + CDS 21583 - 23820 2662 ## COG1629 Outer membrane receptor proteins, mostly Fe transport + Term 23839 - 23895 18.9 + Prom 23863 - 23922 4.0 19 14 Op 1 . + CDS 24099 - 24518 371 ## Aasi_1471 hypothetical protein 20 14 Op 2 . + CDS 24574 - 24894 399 ## COG3293 Transposase and inactivated derivatives Predicted protein(s) >gi|257257208|gb|ACDX02000027.1| GENE 1 90 - 410 431 106 aa, chain - ## HITS:1 COG:SP1928 KEGG:ns NR:ns ## COG: SP1928 COG3293 # Protein_GI_number: 15901752 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 5 103 24 124 129 80 46.0 6e-16 MGAQHDMRLARRHLTELYPYKIVIADKGYQGLAKTGLQTPKKKSKHHLMNKQDKEANRRL GKLRTVIEHINRKLKIFKILSLPYRNRRKRFGLRANLIAGLINAMG >gi|257257208|gb|ACDX02000027.1| GENE 2 464 - 883 356 139 aa, chain - ## HITS:1 COG:no KEGG:Aasi_1471 NR:ns ## KEGG: Aasi_1471 # Name: not_defined # Def: hypothetical protein # Organism: A.asiaticus # Pathway: not_defined # 1 129 13 147 157 97 45.0 1e-19 MKYENLIQRSDREFKRLTGVTPVLFHEMLQITTEAESRKVKSGRPHTLSLADQLLLTLSY LRHYHTQLELAAIYGLSESNVCRTIRKTEDALIRCKRFSLPKHKNPGDHTVLIDVTESPI ERPKKTAAVLQRQEKAAHG >gi|257257208|gb|ACDX02000027.1| GENE 3 1040 - 1249 146 69 aa, chain - ## HITS:1 COG:NMB1696 KEGG:ns NR:ns ## COG: NMB1696 COG0236 # Protein_GI_number: 15677544 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl carrier protein # Organism: Neisseria meningitidis MC58 # 16 69 27 80 81 84 90.0 6e-17 MNPQRTTSPLHSASLPQTNLYEDLEIDSIDAIDLIDHIKRETGSKLQAEDFRNVRTVEDV VQAVLKVQA >gi|257257208|gb|ACDX02000027.1| GENE 4 1506 - 1676 301 56 aa, chain - ## HITS:1 COG:NMA1201 KEGG:ns NR:ns ## COG: NMA1201 COG1773 # Protein_GI_number: 15794145 # Func_class: C Energy production and conversion # Function: Rubredoxin # Organism: Neisseria meningitidis Z2491 # 1 56 1 56 56 103 96.0 8e-23 MAQYMCGPCGWIYDEDLGDPEHGIAPGTKFEDIPDDWKCPECGVGKEDFYLLDFVI >gi|257257208|gb|ACDX02000027.1| GENE 5 1764 - 2852 1861 362 aa, chain - ## HITS:1 COG:NMA1202 KEGG:ns NR:ns ## COG: NMA1202 COG1960 # Protein_GI_number: 15794146 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Neisseria meningitidis Z2491 # 1 362 1 362 363 620 87.0 1e-177 MNRETLLSQVAELVKAKLKPLVDEIDRNGLYPEDFMRELGAIGGFGAVGTEAEGGNGLGL ATQIAVLREVGKECGATSFSAWCQAACAWYLHQTPNQAVKDKYLADILQGKVLAGTGMSN TVKHLAGIEKHNLQAERVDGGYTVNGALPWVSNIGEDHIWANTAQIGDSYVMFITGGQWE GVTLQACPEFCALEGTRTFSLNFKDVFIPDEDIIAAPEEFSDYIATIKSGFILLQIGIGA GVIDGSLGIIRIANVVNADVNSYLDDSYDSLKAALDEAWQTAEQLADLAWNNTPDNLATL KLRAAAAELTLAAAQSAALHAGAKGYLMRSPAQRRAREAMFVAIVTPALKHLRKEISALE AA >gi|257257208|gb|ACDX02000027.1| GENE 6 3004 - 3552 881 182 aa, chain - ## HITS:1 COG:NMB0995 KEGG:ns NR:ns ## COG: NMB0995 COG2128 # Protein_GI_number: 15676886 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis MC58 # 1 182 46 227 227 299 91.0 2e-81 MARLTVHTVETAPEAAKPRVEAALKNNGFIPNLIGVLANAPEALAFYQEVGKLNAANSLT PGEVEVIQIIAARTNECGFCVAGHTKLATLKKLLSEQSIKASRALAAGEFDDAKLGALAA FTQAVMAKKGAISDDELKAFFDAGYNQQQAVEVVMGVALATLCNYVNNVAQTDINPELQA FA >gi|257257208|gb|ACDX02000027.1| GENE 7 3734 - 5425 2388 563 aa, chain - ## HITS:1 COG:NMB0997 KEGG:ns NR:ns ## COG: NMB0997 COG0277 # Protein_GI_number: 15676888 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Neisseria meningitidis MC58 # 1 563 1 563 563 1154 97.0 0 MNASQLISSLTQTVGEKYIITDPAKTEQYRQGYRFGEGRALAVVRPGTILEMWKILQACV EADVIVITQAANTGLTGGSTPDGNDYDRDIVIVNTMRMNIIQTINNNEQVVCLPGSTLNQ LELLLKPLGREPHSVIGSSCIGASVLGGVCNNSGGALVQRGPAYTEMALFAQINEEGKLE LVNHLGIDLGDTPEEILTNLQGHHYQRKDITQDAGKGHDHAYCDHVRQVDEPTAARFNAD PARHYEASGCAGKLMVFAVRLDTFPQEKQTAVFYIGTNDINELTDIRRAALGEFESLPIS GEYIHRHAFDIADVYGKDTFYVIKKFGTHQLPKLFDFKAKVDRFGKKVSFLPKHFSDKVM QFVSKYLPDHLPKSMRDYRDKYEHHLILKMGGKGVDEARAFLKEYFAHHGGAFFECNAEE TQAAMLHRFAVASAAIRYRAVHDDEVEDLVALDIALRRDDRDWFEKLPSEIDNKIIHKLY YGHFMCHVFHQDYIIKKGNDCMALEHEMLHLLDQRGAQYPAEHNVGHLYEAKPALKQFYR KLDPTNSFNPGIGKTSKKKNWAE >gi|257257208|gb|ACDX02000027.1| GENE 8 6086 - 9919 4900 1277 aa, chain + ## HITS:1 COG:NMA1206_1 KEGG:ns NR:ns ## COG: NMA1206_1 COG0277 # Protein_GI_number: 15794150 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Neisseria meningitidis Z2491 # 1 805 1 805 805 1572 96.0 0 MTTTTAPQRIREIPYNYTSYTDREIVIRLLGDEAWQILQDLRGQRRTGRSARMLFEVLGD IWVVVRNPYLVDDLLEHPKRRAALVREMRHRLNEIRKRRDDNPQVDALVAAAEKAVERFD GSFDETRQKRRQILERLSKITKPHNIMFDGLARVTHVTDATDWRVEYPFVVVNPDTEAEV APLVRALIELDLVIIPRGGGTGYTGGAVPLDANSAVINTEKLDKHRGVEFVELAGLDGKH PIIHCGAGVVTRRVEETAHQAGLVFAVDPTSADASCVGGNVAMNAGGKKAVLWGTALDNL AYWQMVNPQGEWLRIERVRHNFGKIHDEETAVFDVHTLDSDGLNVVKTERLEIPGHKFRK VGLGKDVTDKFLSGLPGVQKEGTDGIITSVAFVLHKMPKYTRTVCMEFFGTVVTATPSIV EIRDFLLAHDSVRLAGLEHLDWRYVRAIGYATKAAGKGRPKMVLLADVVSDDEAAVEAAA EHICELARARDGEGFIAVSPEARKTFWLDRSRTAAIAKHTNAFKINEDVVIPLERLGEYS DGIERINIELSIQNKLTLCAALEQYLSGKLPIDKMGTDLPTAELLGERGKHALAHVSAVK ERWDWLLANLDTPLADYKARYGAAVHAAPEAKDDESCFTAFRDFRLRVSVKDDVMKPLAE IFSGKTDTKIIEGLGKIHAKTVRGRVFVALHMHAGDGNVHTNIPVNSDDAQMLQTAYRSV ERIMKIARSLGGVISGEHGIGITKLEFLTDEDLQPFWDYKNQVDPKHTFNRHKLMKGSDL RNAYTPSFELLGAESLIMEKSDLGTIADSVKDCLRCGKCKPVCSTHVPRANLLYSPRNKI LGVGLLTEAFLYEEQTRRGVSIKHFEELMDIGDHCTVCHRCVKPCPVNIDFGDVTVAIRN YLADSGHKRFAPAASMGMAFLNATGPKTIKALRAAMIQTGFPAQNFAYKIGKLLPVGTKK QKAEPKATVGTAPVKEQIIHFINRPLPKSVPAKTPRSMLGIEDDKSIPIIRNPAAPEDAE AVFYFPGCGSERLFSQIGLAVQAMLWHVGVQTVLPPGYMCCGYPQDAGGNKAKAEQMSTN NRVAFHRMANTLNYLDIKTVVVSCGTCYDQLEKYRFEEIFPGCRIIDIHEYLLEKGVKLN GVKGQQYLYHDPCHTPIKTMNATQMASSLMGQKVVLSDRCCGESGMFAVKRPDIATQVKF RKQEEIEKNLKELPQGEPVKMLTSCPACLQGLSRYADDNDMPADYIVIEMAKHILGENWL DEFVKKANNGGVEKVLL >gi|257257208|gb|ACDX02000027.1| GENE 9 10232 - 11893 2057 553 aa, chain - ## HITS:1 COG:NMA0766 KEGG:ns NR:ns ## COG: NMA0766 COG0644 # Protein_GI_number: 15793741 # Func_class: C Energy production and conversion # Function: Dehydrogenases (flavoproteins) # Organism: Neisseria meningitidis Z2491 # 1 553 33 585 585 1135 97.0 0 MTESITRDSMQYDVVIVGAGPSGLSAAIKLKQLAEKNGSEISVCVVEKGSEAGAHSLAGA VIDPISLNELIPDWKEKGAPLTRAVTQDKVLFLTEKKAFNLPITPNFDNHGNYIVSLGEV VRWLAEQAENMGVEIYPGFAAAEVLYHEDGSVKGIATGNMGVGKDGEPTDSFQPGMELWA QQTLFAEGCRGSLSKQVIERFQLDQNSQPQTYGLGIKEIWEVSSEKHQPGLVVHSAGWPL DSKTYGGAFVYHFDDNKVAVGFVVGLDYQNPYLSPFEEFQRFKTHPEIRKTFEGGRRIAY GARSLIEGGLQSLPKLSFKGGVLIGDAAGFLNMPRIKGIHTAMKSAMLAAEAVFPLLENL EEVEGFDSGKEAADYQQRFEQSWLYQELYAARNVRPSFKWGVYLGSIYTGIDQMIFRGKA PWTLKHHGKDNEQLKKAAACKLIDYPKPDGVLTFDRLSSVFLANLAHEENQPDHLVLKNP QTMIDVNYKEYASPETRYCPAGVYEIVEENGSPRLQINAANCVHCKTCDIKDPTQNITWI CPEGASGPNYGGM >gi|257257208|gb|ACDX02000027.1| GENE 10 12046 - 12951 1486 301 aa, chain - ## HITS:1 COG:NMB0586 KEGG:ns NR:ns ## COG: NMB0586 COG0803 # Protein_GI_number: 15676491 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Neisseria meningitidis MC58 # 1 301 1 304 304 442 84.0 1e-124 MKHWKLGVIAALMSGAVYAAPMNVVTSFSILGDVTKQIGGDRVAVQNLVGANQDSHAYHM TSGDIKKIRSAKLVLLNGLGLEAADVQRSVKQSKVPFAEATKGIQALKAEEGGHHHDHDH EGHHHDHGEFDPHVWTDPVLMTTYAQNVANALIQADPEGKTYYQQRLGNYQVQLKKLHSD AQAAFNAVPAAKRKVLTGHDAFSYMGKRYNIEFIAPQGVSSEAEPSAKQVASIIRQIKRE GIKAVFTENIKDTRMVDRIAKETGVNVSGKLYSDALGGAPANTYIGMYRYNVKALTDAMK K >gi|257257208|gb|ACDX02000027.1| GENE 11 13603 - 14331 1184 242 aa, chain - ## HITS:1 COG:NMA1902 KEGG:ns NR:ns ## COG: NMA1902 COG0217 # Protein_GI_number: 15794787 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 1 242 1 242 242 447 99.0 1e-125 MAGHSKWANIQHKKARQDAKRGKIFTRLIKEITVAARMGGGDPGANPRLRLALEKAAENN MPKDNVQRAIDKGTGNLEGVEYIELRYEGYGIGGAALMVDCLTDNKTRTVADVRHAFTKN GGNLGTDGCVAFNFVHQGYLVFEPGVDEDALMEAALEAGAEDVITNDDGSIEVITAPNDW AGVKAALEAAGYKSVDGDVTMRAQNETELSGDDAVKMQKLIDALEDLDDVQDVYTSAVLN LD >gi|257257208|gb|ACDX02000027.1| GENE 12 14703 - 16121 878 472 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 [Haemophilus influenzae 22.4-21] # 4 454 2 445 456 342 42 1e-93 MEETLSALVGAVNLILWDYMLIYALLGIGLFFTLYLGAPQITKLGTGFKSVFGGLFSQKD KDDKSLSQFQALAVAVSAQIGTGNVAGVATAITAGGPGAIFWMWLSAVLGMSTIFAEALL AQKYRVVSHGKYIGGPAFYITHGLTPKIGRGAARFLSGFFSIALIIALGFIGNATQANSI ASSVTIAFNVPALAVGIALAILAGMIIVGGVNRIANIAQFVVPFMAIIYILCAVVILFKF SDHIIPMFNHIFTAAFNPEAVLGGAAGIGMREAVRFGVARGLFSNEAGMGSTPHAHATAD VNHPVQQGLAAFIGVFIDTILVCTATALIILLTDANLSGEQGAAVTQFAFSKAFPGFGSQ LLAVCLTFFAFTTIIGWYYFGESNIRFLFRGKHLGIYRALVLLAIVLGTLGKVDLVWSLS DMFNGFMVIPNLIALFLLRKEIRAVYDDYLAQKKAGKDLSYQYEFHEFHDKA >gi|257257208|gb|ACDX02000027.1| GENE 13 16184 - 16669 248 161 aa, chain - ## HITS:1 COG:NMA1903 KEGG:ns NR:ns ## COG: NMA1903 COG1495 # Protein_GI_number: 15794788 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Disulfide bond formation protein DsbB # Organism: Neisseria meningitidis Z2491 # 3 161 41 199 199 194 66.0 8e-50 MNFFRKTALFLLVLSVLAACGSFVSQYVLGMNPCVLCIVQRLCVLAVGVAALLAVFFRQS SKVGRTFSALLISAPAVYGIGTAAYQLWLQSLPPGTAPSCGAPWTFRLKDWPLFDWFEPI VRGFGNCAVPDYFLGIALPVWSIAYFCFVVVLVWFAWLKTK >gi|257257208|gb|ACDX02000027.1| GENE 14 17147 - 17416 444 89 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225075799|ref|ZP_03718998.1| hypothetical protein NEIFLAOT_00815 [Neisseria flavescens NRL30031/H210] # 1 89 1 89 89 175 98 2e-43 MALTVEQKAQIVKDFQRKEGDTGSSEVQVALLTFRINDLTPHFKANPKDHHSRRGLLKMV SQRRRLLSYLRRTQPDTYRNLITRLGLRK >gi|257257208|gb|ACDX02000027.1| GENE 15 17530 - 18021 768 163 aa, chain - ## HITS:1 COG:NMA0891 KEGG:ns NR:ns ## COG: NMA0891 COG0782 # Protein_GI_number: 15793860 # Func_class: K Transcription # Function: Transcription elongation factor # Organism: Neisseria meningitidis Z2491 # 1 163 1 163 163 300 96.0 1e-81 MSTETKNYITPVGWQALKDELYQLVNKERPEIVQIVNWAASNGDRSENGDYLYGKRRMRE IDRRIRFLTKRLEAAVVVDPELREATDQVFFGATVGLLRGDGREQTVKIVGVDEIDTAQN KISWISPLARCLIKAREGDEVILNTPEGREEIEILSVEYIRID >gi|257257208|gb|ACDX02000027.1| GENE 16 18248 - 19768 1289 506 aa, chain - ## HITS:1 COG:no KEGG:NGK_2582 NR:ns ## KEGG: NGK_2582 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 59 506 88 538 538 512 58.0 1e-143 MVSASLCCLLPSAVLAELPEGGVRQDAPSQDAAVQVQQKQWLDILSEEERSSEKNENVGE PAVVGDDFLAANPRILEDALIQALNGNSADLVSSLAALYRKQPNHNPKLIARADALLAKL KGRTSEAVERYRTLYESDVSDDRILLDLAAAEFQDYRLGEAAAHFRHAAQRDIPAPVLEN VKRFQEAVKRQTEWKWSGGISPVHSDNANNAAPRYCIETRGQTACSVTVPVSANGLNYEL NTEKLTPLYGHHAVKFRANLSGTSYFFDHQSAYDDAFGRAYLGWQRKDGKQTVSVLPFYQ AQLAGSSEFDSKKENNRRAAPYMLAHGIGVQLSHMVNLGNATQLYYSLERYRQNYRETDR ALRNDGWHDSTYLSLARRFGRTTLFGGWQYNRFVPENKNIRNAVNNAAYRRSGFNIGWIQ QWPFLGGLNSRLTASFANRRYKGIMAFGTESQRNREHSLSVSLSHDKLSYKGITPTLNYG YSRIRSNAPYARRSSRQWSLGAEWNF >gi|257257208|gb|ACDX02000027.1| GENE 17 20354 - 21349 952 331 aa, chain + ## HITS:1 COG:no KEGG:NMC1946 NR:ns ## KEGG: NMC1946 # Name: hpuA # Def: haemoglobin-haptoglobin-utilization protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 26 331 25 341 341 278 52.0 2e-73 MKIKVPAISAAATLILTACAGGGASEPKVPVAIPTAQPIANVKLSDESNAIKTINTLSGK GGSLHEAELEVKTSWGSYTDKQYIYQTPSGNYYNISSYSDPIIPSYSSPSYALRTRHEGQ PLSEGGKLFVCCSNSGQFSYAPATKHDHLKFGAWISSDGTADLFVGGKPVGSAKPSWSTP SDSTVAKGKTTYEVWAVRVRNGNIVTSTYDPGKSSGSSEKNTPKLSLLTANFNTNKLGGT ILGNADYGPDVVMKDVGINGVDFSGTAESDGKNGKVEGKFFGQFNGGYKTEVSIGGKVTF DADKSLDTVFGGVENLSDRNTTDTSLTPVSQ >gi|257257208|gb|ACDX02000027.1| GENE 18 21583 - 23820 2662 745 aa, chain + ## HITS:1 COG:NMA0474 KEGG:ns NR:ns ## COG: NMA0474 COG1629 # Protein_GI_number: 15793475 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Neisseria meningitidis Z2491 # 1 745 61 810 810 1119 76.0 0 MVSDESDLVRYDPGISVVEGGRSGSNGFTIRGVDKDRVAINVDGLAQAESRSSEAFQELF GAYGNFNANRNTSEPENFSEVTLTKGADSLKSGSGALGGAVNYKTKSASDYVSEEKPYHL GIKGGYIGRNSQKFSSITAAGTWLGLDALMVYTRRFGKETKNNSDAADTVITDNKQSWSP NAGSTNYGSRGIARSKPDPQNWENISTLFKLGYNFNDKNRIGWIYEDSRTDRTTTELSNM WAANWKGEALGDTRSRQDISYRKRIGFEYKNQLDKGPWDNLNLRYDRQTINMSTWTWDLP TDYNLSGVNSDVYHMFRNIRQKNTQFGADAEKQIDFSKLVWAMQYGLGGSKNDSDNSDHS YWVRLYDPKYQTSNNQELTMLVESSSKNRFAYWNNTFQFGDSSQYRLNAGVRYDNSSSKA KDNPNYTPAIRGQIPYLGSERKHSGFSYGLGLDWKFTPHLNLLAKYSTGFRAPTSDETWL LFPHPDFYLKANPNLKAETAKNFELGLAGSGKAGNFKLSGFQTRYRNFIELTYMGVSSDN PNSPNYAPISDGTALVSSPVWQNQNRSSAWVKGLEFNGTWNLDSIGLPQGTHAGVNVSYI KGKAKQTNGQETPINALSPWSAVYNLGYDAPSKRWGINAYLTHTAAKKPSDTVHSSDDLN NPWPFAKHSKAYTLFDLTGYVNLGKYFTLRAGAYNIGNKKYYTWESLRSIREFGTVNRVD NKTHAGIERFTSPGRSYNFTLEAKF >gi|257257208|gb|ACDX02000027.1| GENE 19 24099 - 24518 371 139 aa, chain + ## HITS:1 COG:no KEGG:Aasi_1471 NR:ns ## KEGG: Aasi_1471 # Name: not_defined # Def: hypothetical protein # Organism: A.asiaticus # Pathway: not_defined # 1 129 13 147 157 96 45.0 3e-19 MKYENLIQRSDREFKRLTGVTPVLFHEMLQITTEAESRKVKSGRPHTLSLADQLLLTLSY LRHYHTQLELAAIYGLSESNVCRTIRKTEDALIRCKRFSLPKHKNPGDHTVIIDVTESPI ERPKKTAAVLQRQEKAAHG >gi|257257208|gb|ACDX02000027.1| GENE 20 24574 - 24894 399 106 aa, chain + ## HITS:1 COG:SP1928 KEGG:ns NR:ns ## COG: SP1928 COG3293 # Protein_GI_number: 15901752 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 5 103 24 124 129 81 47.0 3e-16 MGAQHDMRLARRHLTELYPYKIVIADKGYQGLAKTGLQTPKKKSKHHLLNKQDKEANRRL GKLRTVIEHINRKLKIFKILSLPYRNRRKRFGLRANLIAGLINAMG Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:21:17 2011 Seq name: gi|257257206|gb|ACDX02000028.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont27.1, whole genome shotgun sequence Length of sequence - 24208 bp Number of predicted genes - 26, with homology - 26 Number of transcription units - 12, operones - 5 average op.length - 3.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 76 - 390 153 ## gi|288575680|ref|ZP_05977413.2| conserved hypothetical protein + Term 550 - 592 3.0 2 2 Tu 1 . + CDS 1141 - 1632 117 ## gi|261365828|ref|ZP_05978711.1| conserved hypothetical protein - Term 1565 - 1622 9.0 3 3 Op 1 13/0.000 - CDS 1698 - 1991 468 ## COG1343 Uncharacterized protein predicted to be involved in DNA repair 4 3 Op 2 . - CDS 2066 - 3079 937 ## COG1518 Uncharacterized protein predicted to be involved in DNA repair - Prom 3107 - 3166 2.3 5 4 Op 1 . - CDS 3169 - 3699 319 ## MAE_11120 putative endoribonuclease 6 4 Op 2 . - CDS 3702 - 4787 310 ## COG1479 Uncharacterized conserved protein 7 4 Op 3 2/0.000 - CDS 4845 - 5498 523 ## COG1468 RecB family exonuclease 8 4 Op 4 . - CDS 5513 - 6379 1114 ## COG3649 Uncharacterized protein predicted to be involved in DNA repair 9 4 Op 5 . - CDS 6391 - 8169 1477 ## NLA_7350 hypothetical protein 10 4 Op 6 . - CDS 8166 - 8840 511 ## NT05HA_0330 CRISPR-associated protein Cas5 11 4 Op 7 . - CDS 8927 - 12097 773 ## COG1204 Superfamily II helicase 12 4 Op 8 . - CDS 12072 - 12884 105 ## DNO_0174 hypothetical protein 13 4 Op 9 . - CDS 12959 - 15241 2141 ## COG1203 Predicted helicases + Prom 15497 - 15556 9.9 14 5 Op 1 . + CDS 15795 - 16004 341 ## COG2608 Copper chaperone + Term 16011 - 16053 11.2 15 5 Op 2 . + CDS 16081 - 17610 2026 ## COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) + Prom 17651 - 17710 2.0 16 5 Op 3 . + CDS 17737 - 17985 536 ## gi|261365842|ref|ZP_05978725.1| conserved hypothetical protein + Term 18014 - 18055 10.0 + Prom 18071 - 18130 1.7 17 6 Tu 1 . + CDS 18206 - 18955 1081 ## COG0500 SAM-dependent methyltransferases 18 7 Tu 1 . + CDS 19059 - 19457 527 ## HMPREF0733_10166 hypothetical protein + Prom 19624 - 19683 6.3 19 8 Tu 1 . + CDS 19707 - 20648 900 ## COG1275 Tellurite resistance protein and related permeases + Term 20658 - 20682 -1.0 - Term 20713 - 20759 14.2 20 9 Op 1 . - CDS 20797 - 21237 434 ## PBPRA1783 hypothetical protein 21 9 Op 2 . - CDS 21281 - 21733 576 ## Rpdx1_3594 hypothetical protein - Prom 21798 - 21857 8.1 + Prom 21777 - 21836 6.9 22 10 Tu 1 . + CDS 21923 - 22333 471 ## COG1846 Transcriptional regulators + Term 22361 - 22421 5.1 + Prom 22384 - 22443 3.0 23 11 Tu 1 . + CDS 22652 - 22879 156 ## gi|261379369|ref|ZP_05983942.1| Hmp protein 24 12 Op 1 . - CDS 22835 - 23155 431 ## COG3293 Transposase and inactivated derivatives 25 12 Op 2 . - CDS 23211 - 23630 356 ## Aasi_1471 hypothetical protein 26 12 Op 3 . - CDS 23392 - 23925 128 ## gi|288576404|ref|ZP_06394368.1| conserved hypothetical protein - Prom 24059 - 24118 12.8 Predicted protein(s) >gi|257257206|gb|ACDX02000028.1| GENE 1 76 - 390 153 104 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|288575680|ref|ZP_05977413.2| ## NR: gi|288575680|ref|ZP_05977413.2| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 101 23 125 129 82 53.0 1e-14 MPFQHTAARRRLASMAIAIGIRYSFNTQPPEGGWSQTPAEQQKSSKFQHTAARRRLVKAC MGCTSLPKFQHTAARRRLAAQCLDAGDSSWVSTHSRPKAAGAIN >gi|257257206|gb|ACDX02000028.1| GENE 2 1141 - 1632 117 163 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261365828|ref|ZP_05978711.1| ## NR: gi|261365828|ref|ZP_05978711.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 163 1 163 163 266 100.0 5e-70 MFQHTAARRRLASGTFATWQAGRFQHTAARRRLVWVQVLNLVSNQFQHTAARRRLDEKIN YFDIPEGVSTHSRPKAAGFTAEEIVRQLKAVSTHSRPKAAGAFLFVKLSSIKVSTHSRPK AAGASLKSLAPSGFTTPISLSSQEKREREYNTAFSVAPAFAIS >gi|257257206|gb|ACDX02000028.1| GENE 3 1698 - 1991 468 97 aa, chain - ## HITS:1 COG:SPy1561 KEGG:ns NR:ns ## COG: SPy1561 COG1343 # Protein_GI_number: 15675453 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair # Organism: Streptococcus pyogenes M1 GAS # 1 97 1 97 97 96 47.0 9e-21 MLMLITYDISLEDAEGQARLRRVAKLCLDYGVRVQYSVFECDIAPDQWVVLKDKLLKTYN PETDSLRFYHLGSKWRRKVEHHGAKPAVDVFKDTLIV >gi|257257206|gb|ACDX02000028.1| GENE 4 2066 - 3079 937 337 aa, chain - ## HITS:1 COG:BH0341 KEGG:ns NR:ns ## COG: BH0341 COG1518 # Protein_GI_number: 15612904 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair # Organism: Bacillus halodurans # 1 337 1 343 343 326 47.0 3e-89 MRKLQNTLYITTQGSYLHKERETLVVEQERKKVAQLPVHSIGHIFCFGNVLVSPFLLGFC GENNVNLAFFTENGRFLGRLQGRQSGNVLLRRAQYRVSEQNPVPIARNIIAAKIQASKRV LQRQIRNYGENAAIQSAVDALNISLRQLKGATELDVVRGIEGDAAARYFGVFGQLLSEKS GFSFDGRNRRPPRDGVNALLSFVYSILGKDISGALQGVGLDPQVGFLHADRPGRDSLAQD ILEEFRAWWADRLVLSLINRGQIKPQDFVTEASGAVSLKADARKLLFQALQAKKQEKIVH PFLGEEVEIGLLPYIQAMLLARHLRGDLAEYPPFLMR >gi|257257206|gb|ACDX02000028.1| GENE 5 3169 - 3699 319 176 aa, chain - ## HITS:1 COG:no KEGG:MAE_11120 NR:ns ## KEGG: MAE_11120 # Name: not_defined # Def: putative endoribonuclease # Organism: M.aeruginosa # Pathway: not_defined # 3 176 2 164 294 68 29.0 9e-11 MKINIEKIQKSLDELDRRFNDEVDKPEVDDFQLSIYCKVAALELCGWLEETHDELIKSAL KKKGVNDSDVSDFNEMFIKKVNGLSYKEHLRPLMINAFGFVEITKLEIEVIQVDGLKSIL QELHKYRNYLAHTQYIHFQGRSPVNSQKSIDTPSTIKDKFKKIHPILQEVANYFHR >gi|257257206|gb|ACDX02000028.1| GENE 6 3702 - 4787 310 361 aa, chain - ## HITS:1 COG:lin0833 KEGG:ns NR:ns ## COG: lin0833 COG1479 # Protein_GI_number: 16799907 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 48 311 140 413 489 73 27.0 7e-13 MNIETQEVVEDIYEEGEETIENVVPPTDIFAFNESRSCADLKRMYDKKQIDISPDFQREQ VWNSPSKARFLDSLLKNLPIPSMCISLDMSSQKRVVIDGLQRISTIVEFLDAVENDKDLV LSSLDDIDDRLSGKSIKQIKKYSPDVISFIENVSIPVTVLRCDLSKENHMEYIFTIFHRL NTGGTKLNNQEIRNCIFNGNFNDILFECSYQKSKELESLLGKKNSRFTFEEFILRFFAFQ DKLNNYNGKLTSFLNEYMRENRKLSEDKITDKRDLFTKTVDVFYSKITKEEKFSRVILEA LLYGVGRNLEKSSSMSKEDFNSLCQEIRNSTVFQPSELQGGLMQQNKVKARLNIADEIFR R >gi|257257206|gb|ACDX02000028.1| GENE 7 4845 - 5498 523 217 aa, chain - ## HITS:1 COG:SPy1563 KEGG:ns NR:ns ## COG: SPy1563 COG1468 # Protein_GI_number: 15675455 # Func_class: L Replication, recombination and repair # Function: RecB family exonuclease # Organism: Streptococcus pyogenes M1 GAS # 20 210 11 213 224 147 42.0 2e-35 MTALLTETQGENQDTRLIPLSALQHYAFCPRQCALIHNEQAWAENYLTAQGKALHERVDS GEPETRKGVRFERTVHVSAEKLGISGVLDLVEVETKTGRLKPVEYKRGKPKPDPMDEIQL CAQGLCLEEMTGQTVSEGALWYMQTRHRVPVVFSDDLRAQTLVTIAAVRELLNSGQTPPP DYGKRCKACSLVDICQPELLGKRDRSVRYVEGLFREI >gi|257257206|gb|ACDX02000028.1| GENE 8 5513 - 6379 1114 288 aa, chain - ## HITS:1 COG:BH0339 KEGG:ns NR:ns ## COG: BH0339 COG3649 # Protein_GI_number: 15612902 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair # Organism: Bacillus halodurans # 1 285 1 278 283 129 33.0 5e-30 MSAIQNRYEFVYFFDVTNGNPNGDPDAGNMPRLDPESSKGLVTDVCLKRKIRNFVEISSE NEAGYEIYVKEKSVLNLQNKRAYEALGIESEAKKLPKDEAKARDITDWMCKNFFDIRTFG AVMTTEVNSGQVRGPVQLAFAQSIDPIVPLEVSITRMAVTNEKDLEKERTMGRKYIVPYA LYRVHGFISANLAAKTGFSDDDLTKLWQALQLMFEHDRSAARGEMAARKLIVFKHDSALG SQPAHKLFDAVKVERVNGESGTPASGFGDYKISVVSDGLNGMSVEELL >gi|257257206|gb|ACDX02000028.1| GENE 9 6391 - 8169 1477 592 aa, chain - ## HITS:1 COG:no KEGG:NLA_7350 NR:ns ## KEGG: NLA_7350 # Name: not_defined # Def: hypothetical protein # Organism: N.lactamica # Pathway: not_defined # 1 592 1 592 592 1149 95.0 0 MILASLARYYRRLAAENDDMGNPKVPPYGFSEEKIGWIWVLDKEGRLKTVVPNLTADKKP QPKLMSVPRPEKRTSGIKPNFLWDKTAYVLGVEANKNKAEAKEKPFTSSEKTFDAFKQYH LDLLQNSEDEGLQALCRFLQNWQPAHFAAENLPAEMLDANIAFSLEKPTALIHKREAAQT LWAGCLKSDEALEGLCLISGDTAPIARLHPAIKGVFGGQSSGGSIISFNKEAFASFGKEQ GANAPVSEQSAFAYTTALNYLLRRENNHCLTIGDASTVFWAEADDSTTAQAAEGFFAQVF APPDDEQESAKVFKVLEQMGKGRPLQEIAPELSPNTRFYILGLAPNAARISVRFWLDTTF GQLAANLAQHWQDLALEPCAWKTPPSIWRLLLQTAVLGKSENISPVLAGEMTRAVICGTP YPLSLLSQLITRIRADGDVNGLRVAMMKAVLQRRFRKDFIEEGVPMSLNNESPNRAYLLG RLFAVLERIQYQALGELNAGIADRYYGSASAVPFSVFPRLLSGAKHHLSRLRKDKAGMAV NLDKDLGEIIAKLPETFPRHLSIDEQGRFAIGYYHQKQSYFAKKETAETIEN >gi|257257206|gb|ACDX02000028.1| GENE 10 8166 - 8840 511 224 aa, chain - ## HITS:1 COG:no KEGG:NT05HA_0330 NR:ns ## KEGG: NT05HA_0330 # Name: not_defined # Def: CRISPR-associated protein Cas5 # Organism: A.aphrophilus # Pathway: not_defined # 1 224 1 224 224 457 99.0 1e-127 MNQIRLHVWGDYACFTRPEMKVERVSYDVITPSAARGILAAVHWKPAIRWVIDRIYVLKP IRFESVRRNELGGKISAGKVSGAMKRKSVADLYTLIEDDRQQRAATVLKDVAYVIEAHAV LTAKAGADETVTKHIEMFKRRAKKGQCFQQPCLGVREFPADFALIDEGEPLPPSALSESE ANRDLGWMLHDIDFDHGNTPHFFRAQMKDGVIDVPPFYAEEVKA >gi|257257206|gb|ACDX02000028.1| GENE 11 8927 - 12097 773 1056 aa, chain - ## HITS:1 COG:MK0111 KEGG:ns NR:ns ## COG: MK0111 COG1204 # Protein_GI_number: 20093551 # Func_class: R General function prediction only # Function: Superfamily II helicase # Organism: Methanopyrus kandleri AV19 # 232 706 1 419 711 102 25.0 3e-21 MKELQMKPENKSYNLLNVTRAKAKMFEYHVPESDHIKIPEDPAKLLTISIGLLGDFAASV NRGESGDEYFVELKKNLLFSAHFFDAYHQSRLDGTLDPYLMLLGSASYYLCDLQGASSVL MQKLKQRIDDSKVEGLYCPNLEGAGLEFLLLWILESKFDHYFEKIDSVFGQFIEGISKDF CSFFSSGNDEKLKSQLNELRKYIYSVGSPRQILLGDLICSIGYKKIQNSTWMCLPKYSGL SKREWINTLKKKNFIKEFWPAQHLLGKADILKGESAIVQMPTSAGKTKSTELIIRSAFLS GRATLAVIVAPFRALCNEIKNTLADAFYNEPIKIDELSDTLQIDFEFSNLFGHQQILILT PEKLFYILKHSVDLATKIDLLILDEGHQFDSGVRGITYELLLTSLNLKIPQKAQKILISA VISNAENIGEWLNGESNVVDGEALIPTFKSIAFASWSDQLGRIEYVNTDNIDRNEFFVPR VIEKIELNKKGKERKKRYFPEKGKGSGQSIALYLGLKLISNGSIAIFCGSKLAAVSICEK AIDIIKRNVPLNLPETYSDSQEVIRLRNLHILNLGEDSSASICSKYGIFSHHGNVPHGIR LAIEHAMRENLIRFVVCTSTLAQGVNLPIRYLIVTSIYQAGERIKVRDFHNLIGRAGRSG MHTEGSILFVDPEVYDSRNIFIEKWRWKQIKELLNPNNSEPCISNLLSIFDPIKSDDGKY YIDIKILDFVAAYIDSSNDIHKWIDEIVQKHHDKNFSHDGVTQQIFWKINLICSLENFLL SFESNEEELTELNAIALAEGTLAFYLADEEKKEQLRLLFKILVDNIVTNMKDSNIRIVYG KTFYGIRDSQAILKWLSEYSDKIVMAKNNNEIIESLWEMMKNYIHNNSFNKFNQKDILCE MVKKWISGCSFSEIYQFSKIKGCQLRAGTQLRKIKIENIVDIFEGGIAYDSALFVSTLAE FTNLLEQNDKFKLFNKLQIFQKHLKYGLPSETAITLYEMGFADRVIAQDLASSLGLMSIE KQEIIEELKKNKEKSQEVMAKYPSYFQNEMLRILDN >gi|257257206|gb|ACDX02000028.1| GENE 12 12072 - 12884 105 270 aa, chain - ## HITS:1 COG:no KEGG:DNO_0174 NR:ns ## KEGG: DNO_0174 # Name: vrlR # Def: hypothetical protein # Organism: D.nodosus # Pathway: not_defined # 1 270 1 282 282 277 52.0 3e-73 MCFSFEHMKWLIKSNQQLKTSDGKSVDIFEFRHVKDEQILSAWAKHFRNHYCLDSQIDSL RCGTEYSRAEYLNKIKFPDKSIAPGPSIRAGDFAEILAADYLEYILKHWVPRVRYSHKTV SNESTKGSDTIGFMFSSDGNNSKDTLTIIESKAKYTGNHENRLQTAIDHSSKDIIRKAET LNAIKQKFLDKEDIYNSQRIERFQNEADNPYIQNFVAIAHLDNSNFTEDVITSANSSSHS HTDQLFLIVIKGDEMMKLVHELYERAANEA >gi|257257206|gb|ACDX02000028.1| GENE 13 12959 - 15241 2141 760 aa, chain - ## HITS:1 COG:BH0336 KEGG:ns NR:ns ## COG: BH0336 COG1203 # Protein_GI_number: 15612899 # Func_class: R General function prediction only # Function: Predicted helicases # Organism: Bacillus halodurans # 23 718 14 765 800 324 31.0 5e-88 MTTYYAHSAQDELGNLLPYEHWQTLQSHSVNVGEMAAEFARVFGAQEIACQTGQLHDLGK YSEAFNHRLHGGSSVDHATAGAKIAVEHWVNVIGKLMAFCIAGHHAGLANGNGEGDNRRT LKQRLALQFGADIPALDNLWQQEIKLPQNLSAPPLKADAHHPFFSYAFFTRMLYSCLVDA DYLDTEAFYSNLENKAVERGGYPKLNALQHNFNQFINDFKRRIAQAPVQTEAEKRNAALN RLRSEILDYAVEQAAQPQGLFTLTVPTGGGKTFTSMAFALEHAKRHDMRRVIYVIPFTSI IEQNAAEFRKAFGELGEQAVLEHHSTFDDGKLQNETTKDKLRLASENWDAPIVVTTAVQF FESLFADRSSRCRKLHNIAGSVIILDEAQMLPLNLLLSIMQAIKELAQNYHCSVVMCTAT QPAVQAENGFYRGFENVREIAPKPTALFDKLRRTTVQHIGTQTDADLLAKLAEHPQMLVI VNNRRHARSLYDQARHLDGTFHLTTLMCAKHRSQKLDEIRGRLKNGEPCRVIATSLIEAG VDVDFPLVMRAEAGLDSVAQAAGRCNREGKRLPENSFVWIFAPEEQWKAPPELAAQAAVM RLTADSFSDNLLSTQAVAAYFAELYQLKGSELDNKKILKMHNDTGQSLDFPFQTIADKFR MIESHMQPLIIPFDVEAESLISSLYHADHIGGLLRKLQPYTVQIPEKALAALYKAGRIEP INEKNFGKQFYTLIGLDLYDEMAGLSWEDTAFLKGESLVF >gi|257257206|gb|ACDX02000028.1| GENE 14 15795 - 16004 341 69 aa, chain + ## HITS:1 COG:NMA1476 KEGG:ns NR:ns ## COG: NMA1476 COG2608 # Protein_GI_number: 15794377 # Func_class: P Inorganic ion transport and metabolism # Function: Copper chaperone # Organism: Neisseria meningitidis Z2491 # 1 69 25 93 94 93 69.0 1e-19 METLTLNIDGMTCGGCVKSVTRILENTEGVAKAKVSLENKNAVIEFDPAKTNPAALIEAV EDGGFDAVL >gi|257257206|gb|ACDX02000028.1| GENE 15 16081 - 17610 2026 509 aa, chain + ## HITS:1 COG:lin1461_2 KEGG:ns NR:ns ## COG: lin1461_2 COG1732 # Protein_GI_number: 16800529 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) # Organism: Listeria innocua # 205 504 6 298 299 313 53.0 8e-85 MPDFLPVLPADLWQATLEHLRLSLIALLCAVALAVPLAVWLADKRRWAEGVLQVTNILQT IPSLALLGLLIPFVGIGSPPVLIALTLYALLPIFQNTYLGLSQIDPAIKEAHTAFGLSRW QALWRIELPMALPAMISGIRTASVLIIGTATLAALIGAGGLGNLILLGIDRNNMAMTFTG ALLSALLAVLVSGGIGILQKSKHKMPITAALLAILIGIGLAPIFQTNPSAQKITIAGKLG SEPDILINMYKQLIEENNPRAQVAIKPNFGKTSFLFNALNSGEIDIYPEFTGTVLESLVK VPAAQQNRRLSPEQTYQTAKDLLTRQHRLTFLPPMAYQNTYALAVSQDYAAAHNLHKISD LKRVQNQIRAGFTLEFTDRADGYKGLQQHGIQFRHLSTLEPALRYTALLNGKIDLVEAYS TDSDLKQYRLAVLSDDIALFPSYQGAPLMKTEFAEQHPDIVNALNKLAGKISEAEMTEMN YRVKVGGEKPADVARDYLQKNGLINDKGK >gi|257257206|gb|ACDX02000028.1| GENE 16 17737 - 17985 536 82 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261365842|ref|ZP_05978725.1| ## NR: gi|261365842|ref|ZP_05978725.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 82 1 82 82 99 100.0 8e-20 MSGKLDQISGNVKEKAGELLDDPKLQAEGVIQQGIGKVKEVAADIEEKASDVLKKGKEEA EHLVDEAKEKAENLIDNIKSKF >gi|257257206|gb|ACDX02000028.1| GENE 17 18206 - 18955 1081 249 aa, chain + ## HITS:1 COG:AF0140 KEGG:ns NR:ns ## COG: AF0140 COG0500 # Protein_GI_number: 11497757 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Archaeoglobus fulgidus # 25 209 6 172 261 63 26.0 2e-10 MPSAKLIQKLKPALQNQLPPEQDGILLCLDSDNVTGDNAKYMNMYNRLARWYDFGERWIA RLKYGNSINKMRRSLMGELEWRQDCTALYVSIGTGTDLNHLPADIDPAALDLTGADLSLG MLERCHNVWRKIAAGLDLVHCNAEDLPFADNMFDVVFHVGGINFFSDKQKAINEMLRIAK PGTKIMIADETTDFIQQQYKKSLFTRNYFQDTDFDLTQIENCIPETVQEKKTRLLWSNRF YCITFRKPV >gi|257257206|gb|ACDX02000028.1| GENE 18 19059 - 19457 527 132 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0733_10166 NR:ns ## KEGG: HMPREF0733_10166 # Name: not_defined # Def: hypothetical protein # Organism: R.dentocariosa # Pathway: not_defined # 1 131 1 141 144 109 47.0 4e-23 MNIPFAAAALLLVVAFFAHLFVGTRETLSQKPDEENTTQQGMRNWMQAVCAFQLVSIDLL LLAAIACLLAFTRVFDGMEAASARFVAAYLGLWCAAWLIQLKMAGARGKTYFLLGQWILF LLCALLMLWGAY >gi|257257206|gb|ACDX02000028.1| GENE 19 19707 - 20648 900 313 aa, chain + ## HITS:1 COG:NMB1603 KEGG:ns NR:ns ## COG: NMB1603 COG1275 # Protein_GI_number: 15677453 # Func_class: P Inorganic ion transport and metabolism # Function: Tellurite resistance protein and related permeases # Organism: Neisseria meningitidis MC58 # 2 313 3 313 314 324 69.0 2e-88 MSTKKFPVPLSYFSMPLGLFALGLSWRYGARIGLLPHWAAETLLAAAFALWLLLVIAYII KIRFFRPEFLQDLQDLVQCCFISAIPITTMLAGLAALPYQTLLAKGLILLGTAGQLAFAM YRAGGLWRGVHTLDATTPIVYLPTVATNFVSATAMAALGWSDYAWLFLGAGLFSWLSLEA AILSRLRTGTPVNAPARGIVGIQLAPAFVGSGAYFAVSGGHIDAFALLLIGYGCLQFLLL LRLLPWMLEQGFSPSFWGFSFGLAAMTGCGFHLIAEQRLLFLGYSLATTGSGLVMLLLLA TLNLARQGRLLVK >gi|257257206|gb|ACDX02000028.1| GENE 20 20797 - 21237 434 146 aa, chain - ## HITS:1 COG:no KEGG:PBPRA1783 NR:ns ## KEGG: PBPRA1783 # Name: not_defined # Def: hypothetical protein # Organism: P.profundum # Pathway: not_defined # 41 134 20 113 113 110 52.0 1e-23 MNTRKKTIIAVAAATVFLCVAGCTAKAEQWRAQREAMHNSVVLINTFEVPQGKEAETFAA WQKARDFLKTQPGYIGTRLHQNIDPNGKYHLVNIARWRSTEDFQAAIAKMRQALPDNMPK GVTASPGLFKVIESDMPHGFGRRGGK >gi|257257206|gb|ACDX02000028.1| GENE 21 21281 - 21733 576 150 aa, chain - ## HITS:1 COG:no KEGG:Rpdx1_3594 NR:ns ## KEGG: Rpdx1_3594 # Name: not_defined # Def: hypothetical protein # Organism: R.palustris_DX-1 # Pathway: not_defined # 6 145 2 141 150 144 54.0 1e-33 MNRNTLRKIHAAAGAGAFLFIASFWSSTVYSELFGSHETVAAVKQTIVYALFGLIACMAT AGATGMKMGGKSKHAAIAAKRRRMPFIAANGVLILLPCAFFLNSRAAIGQFDSVFYIVQS IELIAGATNLTLLGLSMKDGFSIRKPKKKA >gi|257257206|gb|ACDX02000028.1| GENE 22 21923 - 22333 471 136 aa, chain + ## HITS:1 COG:mll5152 KEGG:ns NR:ns ## COG: mll5152 COG1846 # Protein_GI_number: 13474295 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Mesorhizobium loti # 2 129 14 141 143 114 51.0 7e-26 MNHIARQFAILLGEGLKPLGIAPAQFPILLELWQKDGLSQQELVERADLKQATIANTLAR MERDGLITREPNPDDARSRLIMLTEQARALQQQSTEIAKAINQTALSDLSVDEQNLFLEM AAKIVARQQEMIAGAK >gi|257257206|gb|ACDX02000028.1| GENE 23 22652 - 22879 156 75 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261379369|ref|ZP_05983942.1| ## NR: gi|261379369|ref|ZP_05983942.1| Hmp protein [Neisseria subflava NJ9703] Hmp protein [Neisseria subflava NJ9703] # 10 61 28 79 429 76 69.0 7e-13 MAACHSVSGKLGVYPLRGLLLQLTGTISILAMSACLILAVRPKILETPLGGLDKIDLLRK YSSHCINQPRNQICP >gi|257257206|gb|ACDX02000028.1| GENE 24 22835 - 23155 431 106 aa, chain - ## HITS:1 COG:SP1928 KEGG:ns NR:ns ## COG: SP1928 COG3293 # Protein_GI_number: 15901752 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 5 103 24 124 129 80 46.0 6e-16 MGAQHDMRLARRHLTELYPYKIVIADKGYQGLAKTGLQTPKKKSKHHLMNKQDKEANRRL GKLRTVIEHINRKLKIFKILSLPYRNRRKRFGLRANLIAGLINAMG >gi|257257206|gb|ACDX02000028.1| GENE 25 23211 - 23630 356 139 aa, chain - ## HITS:1 COG:no KEGG:Aasi_1471 NR:ns ## KEGG: Aasi_1471 # Name: not_defined # Def: hypothetical protein # Organism: A.asiaticus # Pathway: not_defined # 1 129 13 147 157 97 45.0 1e-19 MKYENLIQRSDREFKRLTGVTPVLFHEMLQITTEAESRKVKSGRPHTLSLADQLLLTLSY LRHYHTQLELAAIYGLSESNVCRTIRKTEDALIRCKRFSLPKHKNPGDHTVLIDVTESPI ERPKKTAAVLQRQEKAAHG >gi|257257206|gb|ACDX02000028.1| GENE 26 23392 - 23925 128 177 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|288576404|ref|ZP_06394368.1| ## NR: gi|288576404|ref|ZP_06394368.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 177 1 177 177 278 100.0 1e-73 MNMHKNTRLTPHHRQTIWLAYTQGKESVTSLARRYQVSRVTIYRALKAARGRLLKPQTST NNRFKQAKYGMKRLAKVERGIQEKLDLLRKYPEDLQFPNEIRKPNPKKRQGIQTAHRCNA RPFSRNAANHHRSRKPEGQVRQAAYAQLGRPTAAYPKLSAPLPYPTRIGRHLRPFRK Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:22:28 2011 Seq name: gi|257257204|gb|ACDX02000029.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont28.1, whole genome shotgun sequence Length of sequence - 21072 bp Number of predicted genes - 14, with homology - 14 Number of transcription units - 8, operones - 2 average op.length - 4.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 419 395 ## COG2801 Transposase and inactivated derivatives + Term 567 - 597 -1.0 2 2 Op 1 . - CDS 716 - 1402 739 ## COG1011 Predicted hydrolase (HAD superfamily) 3 2 Op 2 . - CDS 1389 - 2363 1110 ## COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) 4 2 Op 3 12/0.000 - CDS 2350 - 2967 727 ## COG2148 Sugar transferases involved in lipopolysaccharide synthesis 5 2 Op 4 25/0.000 - CDS 2960 - 4132 1696 ## COG0438 Glycosyltransferase 6 2 Op 5 . - CDS 4147 - 5220 1234 ## COG0438 Glycosyltransferase 7 2 Op 6 . - CDS 5234 - 6451 1016 ## MS1493 hypothetical protein - Prom 6540 - 6599 2.1 8 3 Tu 1 . - CDS 6686 - 8104 769 ## COG2244 Membrane protein involved in the export of O-antigen and teichoic acid - Prom 8162 - 8221 1.8 - Term 8204 - 8248 11.3 9 4 Tu 1 . - CDS 8269 - 9576 1963 ## COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase - Prom 9742 - 9801 9.4 - Term 9926 - 9990 18.1 10 5 Tu 1 . - CDS 10001 - 10657 843 ## COG2910 Putative NADH-flavin reductase - Prom 10691 - 10750 4.1 + Prom 10695 - 10754 5.0 11 6 Op 1 . + CDS 10778 - 11668 1071 ## COG0583 Transcriptional regulator 12 6 Op 2 . + CDS 11665 - 11943 321 ## COG2827 Predicted endonuclease containing a URI domain + Term 11976 - 12018 7.4 + Prom 12030 - 12089 4.0 13 7 Tu 1 . + CDS 12112 - 12732 667 ## gi|261365863|ref|ZP_05978746.1| putative periplasmic protein + Term 12770 - 12828 8.2 + Prom 13402 - 13461 3.9 14 8 Tu 1 . + CDS 13483 - 21070 7996 ## COG5295 Autotransporter adhesin Predicted protein(s) >gi|257257204|gb|ACDX02000029.1| GENE 1 3 - 419 395 138 aa, chain + ## HITS:1 COG:HI1721 KEGG:ns NR:ns ## COG: HI1721 COG2801 # Protein_GI_number: 16273607 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Haemophilus influenzae # 1 133 81 213 216 131 51.0 4e-31 ILDLFNREIIAYAMSRNANSEMVKEMLEKAAPRLTDKGTMLHSDQGVLYRTAGYRELLAQ HSMVQSMSRKANCWDNAPMESFFAVLKTECFYRAGELTVDELMKQIDDYMDYYNRERCSL KLKKLSPVAYRTQLAQSA >gi|257257204|gb|ACDX02000029.1| GENE 2 716 - 1402 739 228 aa, chain - ## HITS:1 COG:MJ1437 KEGG:ns NR:ns ## COG: MJ1437 COG1011 # Protein_GI_number: 15669628 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Methanococcus jannaschii # 11 224 5 222 228 68 26.0 1e-11 MKTINPETAVIVFDLDDTLYSEYEYKLSGIRAVVDTVTALYPDWDSDDLWRSIDPDGKDW LDKLCRHCGFNESEKQVLLWQYRLHRPTLTPYAAPDFLSELTAPFAARALITDGRSLTQR LKLEALGLFSLFDDILVSEACASEKPDSKRFRYLQDKYAAKADCFIYIGDNISKDFIAPN ALGWITIGLRPSGRNIHCHLPENFSTEYHPAFWIDSLQDLASLIDSNI >gi|257257204|gb|ACDX02000029.1| GENE 3 1389 - 2363 1110 324 aa, chain - ## HITS:1 COG:CAC2189 KEGG:ns NR:ns ## COG: CAC2189 COG0458 # Protein_GI_number: 15895458 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase large subunit (split gene in MJ) # Organism: Clostridium acetobutylicum # 5 320 2 315 315 142 31.0 6e-34 MKKNNVLILSAGRRVELVQDFQTEAAKFSDDVKILTTDLVPRMSSACHVSDGSFEVPLIS SDSYIDSIFNLAVRENIGLIIPTIDTELQKLANERDRFEAAGIHIVVSDADFIAQCRDKR KTADLFAQYGIRSPEIYDREKLVFPCFAKPYDGSRAIGAKRIDTPADLTPEVLADPKLMF CQLIDIENEFSEFTVDMYYDRQGHLKCTIPRKRLEVRTGEVSKGITRKNSLYQTLLEKMA VLEGARGCITAQFFCNEETGEFYGVEINPRFGGGFPLTYAAGGNYPGWLMREYLGDGEIP FSDDWENNLIMLRYDAKVLVHEND >gi|257257204|gb|ACDX02000029.1| GENE 4 2350 - 2967 727 205 aa, chain - ## HITS:1 COG:NMB1820_1 KEGG:ns NR:ns ## COG: NMB1820_1 COG2148 # Protein_GI_number: 15677656 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sugar transferases involved in lipopolysaccharide synthesis # Organism: Neisseria meningitidis MC58 # 1 198 1 198 223 358 87.0 5e-99 MSKFFKRLFDIVASASGLIFLSPVFLILIYLIRKNLGEPVFFTQERPGKDGKPFKMIKFR SMRDAVDKDGNPLPDSERLTPFGKKLRATSLDELPELWNVLKGDMSLVGPRPLLMSYLPL YNEFQFRRHEMKPGVTGWAQVNGRNALSWDEKFAHDIWYIDHYSFWLDMKILFLTVKKVF IKEGISAEGEATMPYFTGNDTDEKK >gi|257257204|gb|ACDX02000029.1| GENE 5 2960 - 4132 1696 390 aa, chain - ## HITS:1 COG:NMA0640 KEGG:ns NR:ns ## COG: NMA0640 COG0438 # Protein_GI_number: 15793628 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Neisseria meningitidis Z2491 # 1 390 1 387 387 632 78.0 0 MNITIVAPYCSLPSEPHFNRFWYLAELLSQSHDVLLITSNFKHYDKSFRRPEDAESASQG RLKVMLLEESGYGKNVSLDRVKSHHVFVKNFEQWLNNCRPGEQDVVFSAYPLIATNLLLG EHKARLGYKLIIDVQDVWPESFSSVVPFLKKIPHNLLPFSSRANRAYRYADALVAVSQTY LDRAKEANPNVPGEVVYIGADFPKLDAAPAKDFGDNKTRFFYLGTLSYSYDVETVCKGVR KLLDDGENVELHIMGGGPDLDRLKQYACEGIWFYGYIPYAEMMSVAKGCDISVNAIHSYA MQSITNKLSDYMALQKPILNSQVNDEVAEVLTLLPHADYRSGDVDSFVRAAKDILARKND PVQSDEIVRRFKRDVAYQKIVNLIERLAHE >gi|257257204|gb|ACDX02000029.1| GENE 6 4147 - 5220 1234 357 aa, chain - ## HITS:1 COG:RC0575 KEGG:ns NR:ns ## COG: RC0575 COG0438 # Protein_GI_number: 15892498 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Rickettsia conorii # 135 324 118 303 338 83 28.0 8e-16 MKKIVLTTSMSGLGGTENATFRLGRLLRQRGHEVVLASSDGPLIKEAQALGIQWHPIDFY QGGILGYIKGMFAYMKMLKQEKPDIIHCQMARIVPACAIAAKISSPKTKVFYHARGLDAE TYPKIAKLFDKLGVYIIGNCRHEREKLIRHGFPANRIAYTYNALHKADYVPEKTAKDYVM LGTLSRLDTVRAVHVMLDIFKKMVDRNMPVRLNVAGIGEEMDNLKAQAKRLGIDDKITFL GGVRDLTGFFKDVDILVNTPHCIGDHGAGVGNNILEAGLYDTPVVTYNMGGISEMVITGE TGYCFPFGEDEAFIEAVDKLIKQPELREKLGKALHKHVETLCSDDEIYRTTMAAYDM >gi|257257204|gb|ACDX02000029.1| GENE 7 5234 - 6451 1016 405 aa, chain - ## HITS:1 COG:no KEGG:MS1493 NR:ns ## KEGG: MS1493 # Name: not_defined # Def: hypothetical protein # Organism: M.succiniciproducens # Pathway: not_defined # 1 391 21 410 428 146 31.0 2e-33 MLGPMLSYKAGIPRIDNPLTILLLPTALLIFALESKRFNGKAGRILAALTIMCGWGGIHL FITTLDSVRIMDTFFFLSLPSLFYLLYLVLSRHENPVAFIRRLLLFFCAFIVIPPAVEIL TGIQFVQADEVLAIDAGIIKGFFFNPNNLGTTALCFAPAVLVFFNIDVSKKEYLLGWMLF LCLGVVIFASASRTATLCYIILFILNLIYRNNGLFTLMTIGVTGAGLSMIPKQYIADFLL SLHGNAFLENISSRLYLFLFDLESDNSVGYRQEIYNYFWEHPPFLLLGYGPKKFQEYFGG HLSDSLAFENPHSFLIELYLGFGLISLAAFLFYAAYYFFCVAAGRNMKSKQRVIGLAAMG LFLLAGFIPSTILRMPFIWLPCFLIFLYSVLPQRDAAYNAYRYTP >gi|257257204|gb|ACDX02000029.1| GENE 8 6686 - 8104 769 472 aa, chain - ## HITS:1 COG:NMB1818 KEGG:ns NR:ns ## COG: NMB1818 COG2244 # Protein_GI_number: 15677654 # Func_class: R General function prediction only # Function: Membrane protein involved in the export of O-antigen and teichoic acid # Organism: Neisseria meningitidis MC58 # 1 459 1 459 473 340 47.0 4e-93 MNIKKILGYALGPIGSAAFGILSLPLISWYYPAEDIGRIVLLQTISGLTILILGLGLDQA YIREYYAAKDKASLFKSISLSPFVLTTAVILAVLVWNTAWPADLIFDLQDKTLGLLFLIF LLTSLFARFLSLILRMQEKAVAFSLSQLTPKFLILVLVLLFVFSGVKTDTVSLVLAYTVA QVLTVAVLTYQTRHELRAAAHAPWSSETHHASLRYGLPLAFGNLAYWGLTSVDRFSLKQW AGLDELGIYSMAVSFGAVALIFQSVFSTIWAPLVFKWVEDKTHLDKIGGITLSMTELISA MICFIGIFSPVVTWILPDKYAPVQFLLLSCMLYPLFYTLTEVSGIGLNVVKRTWLITAVN IVAFAINFGLLSLLVPHLGARGAAIASAISFWVFCVIKTEFSSRVWRPLPRLKIYTNTAL SVLLCVSYTYFGTKENYPLFALLWLAGLSYLIWRRKSSLISAAAAVKSRLKR >gi|257257204|gb|ACDX02000029.1| GENE 9 8269 - 9576 1963 435 aa, chain - ## HITS:1 COG:PA3159 KEGG:ns NR:ns ## COG: PA3159 COG0677 # Protein_GI_number: 15598355 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetyl-D-mannosaminuronate dehydrogenase # Organism: Pseudomonas aeruginosa # 3 435 5 436 436 661 74.0 0 MKNTTIQKFADKTAKIGIVGLGYVGLPLMLRYVDIGYQVLGFDIDKTKVDKLNKGETYIE HIPAEKIAAASNSLFEATTDFSRIGEVEAVILCVPTPLNKYREPDMSFVIDTTDAVKPYL RAGQVLSLESTTYPGTTEEELLPRVEEGGLKVGKDVFLVYSPEREDPGNPNFETRTIPKV IGGHTPACLEVGIALYQPAIDKVVPVSSTKAAELTKLLENIHRAVNIGLVNEMKIVADKM DVDIHEVIAAAATKPFGFVAYYPGPGLGGHCIPIDPFYLTWKAREYGVNTRFIELAGEVN SHMPDYVIGKVGLALNEHNRSIKDSKILVLGIAYKKNVDDMRESPSVEVMDRLHKLGANI SYSDPHVLEFPYIPGHHYFDLKSEPLTPETVAKYDCVVLTTDHDKFDYDMIAEHAKLIVD TRGKFPAKNPKVVKA >gi|257257204|gb|ACDX02000029.1| GENE 10 10001 - 10657 843 218 aa, chain - ## HITS:1 COG:PA0741 KEGG:ns NR:ns ## COG: PA0741 COG2910 # Protein_GI_number: 15595938 # Func_class: R General function prediction only # Function: Putative NADH-flavin reductase # Organism: Pseudomonas aeruginosa # 1 216 1 212 213 148 41.0 6e-36 MKIAVIGATGYVGNAVVQELAGRGHEVTAFARNTDKVFQAQNVAAVSADVNAADFADKLA GFDAVVSAFNPGWTNPNIGADFTRGANNIVEAAKAAQVPYLLIVGGAGSLYAAPDLQVVD TPEFPKEIYDGANAARHLLAALLPRRDVNWSFVSPPVRLGADGGFSEDKTGKYRLGKDDL LMDGEIPAGISVADLAIAIADDAENKAHLFERFTVAAA >gi|257257204|gb|ACDX02000029.1| GENE 11 10778 - 11668 1071 296 aa, chain + ## HITS:1 COG:PA0123 KEGG:ns NR:ns ## COG: PA0123 COG0583 # Protein_GI_number: 15595321 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 1 295 1 298 302 176 37.0 6e-44 MQDIKPLLVFAAVLEHGSMNAAAAALGMTPSAVSQHINRLETLHGIKLLNRSTRSLSPTD AGRALGEYCRRLATTVADTHTVIDNLKTEPVGELRISLTSTVIESRAFQTAFSRLRTEFP KIRPVLNFSDTLDNLQHSQTDIAIRGGDRALDDPNLVARHLVTWPYTICAAPDYLDRHAP ITHPSQLHAHRWLHFLPVRTTLQHGGESYFLDVADSIACTHLAAVRSLTERGFGLSLQVG GEVREKIAQGRLKTVLPEWTLPPVSLYLVTPYRVQSAKTEAAVRIFTESFAKEADA >gi|257257204|gb|ACDX02000029.1| GENE 12 11665 - 11943 321 92 aa, chain + ## HITS:1 COG:NMB0361 KEGG:ns NR:ns ## COG: NMB0361 COG2827 # Protein_GI_number: 15676276 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease containing a URI domain # Organism: Neisseria meningitidis MC58 # 1 84 1 84 91 116 69.0 1e-26 MSAENWSVYLILCENGALYCGISNRPQERFAAHLAGKGAKYTRLNKPTAMRIVSDDLSKS EALKQEIAIKKLTAGKKRELWEAAAGNASTER >gi|257257204|gb|ACDX02000029.1| GENE 13 12112 - 12732 667 206 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261365863|ref|ZP_05978746.1| ## NR: gi|261365863|ref|ZP_05978746.1| putative periplasmic protein [Neisseria mucosa ATCC 25996] putative periplasmic protein [Neisseria mucosa ATCC 25996] # 1 206 1 206 206 304 100.0 2e-81 MKPIPYILAAALCLSSSAVSANPVTYICKTANGIVFTNQKTGAECTVSHVDGSATVSSEE ADSAVPETVNLKEAIGQAAPEIDDIKILPRPAVSSVTNTAEAANPRLDVRLRNQPDTKAA KARATEMNRKAKILPAPVVSAPAKPQMSRKQILQKEVRNEQAALARAQSQLAAARRQGDQ AKINRLTRDVSDRQASIRAMQNEMGR >gi|257257204|gb|ACDX02000029.1| GENE 14 13483 - 21070 7996 2529 aa, chain + ## HITS:1 COG:mll2848 KEGG:ns NR:ns ## COG: mll2848 COG5295 # Protein_GI_number: 13472521 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Mesorhizobium loti # 54 1262 85 1289 1953 126 27.0 5e-28 MNKIFKVVWNRTIGSFVVTSELAKGRVKSSSEGAEGDVRASEEGRLKTLFRLTALSAALL GFSEGAWAVVAPAGQVANGTGGETAVNGGDARGTGAVAVGAYARAGTRGNPPHGMNSGTV AIGGSNATTAALADGNNAIAIGTNSNSNGAKATTIGSDTIASDQFATALGGRAEAKERGA TAIGGWSQATGQFAVAIGGSDRFGRDTNTELNDGSGATLASGARSTAIGRRAKASGNDTL AFGTNAEATGVEAVAIGKGAASTAAKALALGQGARAQAGNTVAFGTGAQATQDGSIAIGT NTIATGVYKDTSRKGKAIAIGYNTNALGESSIAIGADDSAYGALTASSRQGIAIGTGAKA TGETQSIAIGPDAISSGTQSTSIGNNTRATGDSSIAIGGDDWNIVRTKQVAAAGNKLVHQ VFQDLTGMPMKQQGEAYGNPFKGTTAGDAAVAIGVAALAEGALSTAFGSGTSASGVGAAA FGVGATASQNKSVAIGAGSHTNTNATAVTEATVNGVTYRGFAGTEHITTGSQVSFGSAGY ERQLKHVAPGAITATSTDAVNGSQLYALHVGAGNIAKSVADALGGGATVGNDPTHNQGSF VTLPSYDVLKGSDTPNTVGNGAVKFNTTSKNVADALTNLNTYVNQGFSVKDNEGTAKGIV TPGESVQFADGNATTVTVDTEANGNTKVKYDVQVDGETVKIKNGKLTAASQTHFYSVKNE DQTKGNYNNDGATGDNALAAGVDASATANGTTAVGLKAQASAESAIAVGSETKAAAKNAV VIGNKASVEAATGSVASVNGTTTGEGSVAVGAASKASGTNATAVGQAANAFGQNSFAGGQ NSKASGKSSVAIGDGANATDDSSSAVGPYAQATKSGASAFGYYANALGENSLAAGRNAQA TNANAVALGNESKATGQNTIAFGNNANASQNQAMALGRNTVASAGYTVALGDEAKATATK AIAFGSGAQATGANSVATGVQAKTHADDALAVGSNANASGESAIALGKQSNAWKVNSLAF GNSANSNGERAIAIGLESVSNGQNAVSVGQKAYADEHGVAIGSESNAAQAAAIAIGNKAQ AMKYSSIVIGEEAKSNNSRSVVIGYHASATNPAMSASNQDTNQTVAIGAYANAWGDQSTA IGNNVDAKGNSSIAIGADDWDTVAVKTVAGTGKTVKQVYQDYTGDVMETGDDTYTHTTSG EAAVAIGTKSQAEGELSTAFGTGTRAQGVASAAFGMGAKATKGNSVAIGAGSTTATDATS VNEATVNNLKYSGFAGGNNVNPGDQVSFGSAGYERQLKNVAPGKISNTSTDAINGSQLYA VQNVLGNTAQTVKNVLGGDAAVDENGSITMSNIGNTGAGNIHDAINSVKETAEKGWKLKV NEEAGSEKIAPDDTVTVKQGKNIRVKRSSKDLTIETEDNVAFNKVTVGDSVLGSNGLNIT NGANPVSLTKDGLNNGGNKVTKIADGEADTDAASYKQVKAAKTEVQKGTNVAEVKKTEGT DGQAIYTVNAKGTVVSAPGADNGLTLGSSEDTTTNVTTYNLDLSDKTKESLKKADSALQN IGVQVNGTAAKTLTKDDSTLNFVNGTGTTAENKGGTVTFNVNKSTLTTSAGGVVSADTAG DVFATATDVANAINKAVVDSEKTSIVAAGDNTHVASQVTGNQTLYTVHADKTTVSVKADG KLALNPAEATNSNQTKTTNYELDLSDDAKAEIQKGVDAKTAVDSKGIAFAGTNGTTDAAK LGETINLKGDDKNVETEAGTDGIKVKLKDEITLTSVTANTLKAGDSVLTNDGLNIAKGTA GSPVSLTKSGLNNGGNKITKVAKGENEDDAVNYAQLKELADKGLTFDADGNTSTSSKKLG ERVGIKGGSNITTSADSDNVTVKLNDDITLTSVTATTLKAGDSTLTNAGLVTPKVTAGNS VLTTDGLTIANGANPVSLTKSGLNNGGNKITKVAKGAADTDAVNVSQLNPVAKALNTSID PATGEVAEPNFTVNHADGTAGTPVHTVQDALNEVGKELNKGLNIAADKGTTDKVNLGETV TYTSKDKNIVTTVGSNEIDFSLADKITVGKAGQNPVVIDGTNGTVSGLTNKTLGGTDFAT SDKAATEAQLDATQANLKTILGGKAANNNGNVTTSNIGETGADNVHDAIKSVKETAEKGW KLKVNEETSSEKINPDDEVAIKEGKNIKVTRNGKNITVATAEEVVFNKVTVGNSELTSAG LTTPKVTAGNSVLTTDGLTIANGANPVSLTKSGLNNGGNKITKVAKGAADTDAVNVSQLN PVAKALNTSIDPATGEVAEPNFTVNHADGTAGTPVHTVQDALNEVGKELNKGLNIAADKG TTDKVNLGETVTYTSKDKNIVTTVGSNEIDFSLADKITVGKAGQNPVVIDGTNGTVSGLT NKTLGGTDFATSDKAATEAQLDATQANLKTILGGKAANNNGNVTTSNIGETGADNVHDAI KSVKETAEKGWKLKVNEETSSEKINPDDEVAIKEGKNIKVTRNGKNITVATAEEVVFNKV TVGNSELTS Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:22:49 2011 Seq name: gi|257257202|gb|ACDX02000030.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont29.1, whole genome shotgun sequence Length of sequence - 18388 bp Number of predicted genes - 13, with homology - 13 Number of transcription units - 4, operones - 3 average op.length - 4.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 731 1030 ## COG3209 Rhs family protein - Prom 794 - 853 5.4 - Term 846 - 877 1.2 2 2 Op 1 . - CDS 918 - 1355 306 ## gi|261365867|ref|ZP_05978750.1| conserved hypothetical protein 3 2 Op 2 1/0.000 - CDS 1381 - 2949 1112 ## COG3209 Rhs family protein - Prom 3007 - 3066 1.7 - Term 3342 - 3379 1.0 4 2 Op 3 1/0.000 - CDS 3546 - 4076 490 ## COG0666 FOG: Ankyrin repeat 5 2 Op 4 1/0.000 - CDS 4066 - 8499 4792 ## COG3209 Rhs family protein - Prom 8609 - 8668 6.4 6 2 Op 5 1/0.000 - CDS 8813 - 9205 124 ## COG0666 FOG: Ankyrin repeat 7 2 Op 6 . - CDS 9258 - 11330 2138 ## COG3209 Rhs family protein - Term 11665 - 11702 5.1 8 3 Op 1 . - CDS 11891 - 12265 202 ## gi|261365874|ref|ZP_05978757.1| conserved hypothetical protein 9 3 Op 2 . - CDS 12330 - 12872 325 ## COG3209 Rhs family protein 10 3 Op 3 . - CDS 12921 - 13166 88 ## gi|261365876|ref|ZP_05978759.1| conserved hypothetical protein 11 3 Op 4 . - CDS 13163 - 14458 1009 ## COG3209 Rhs family protein - Prom 14536 - 14595 5.6 12 4 Op 1 . - CDS 14638 - 15450 189 ## gi|261365879|ref|ZP_05978762.1| conserved hypothetical protein 13 4 Op 2 . - CDS 15452 - 18388 3427 ## COG3209 Rhs family protein Predicted protein(s) >gi|257257202|gb|ACDX02000030.1| GENE 1 2 - 731 1030 243 aa, chain - ## HITS:1 COG:PA2684 KEGG:ns NR:ns ## COG: PA2684 COG3209 # Protein_GI_number: 15597880 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Pseudomonas aeruginosa # 2 145 587 717 1317 70 34.0 3e-12 MGHTFGYHYDKARRLVGLTNENGARYRFAYDVLDRLIAESGFDHKLTGYRYNAGNELVEQ REFGDDASLAAKLMAQLGGQPVPKRDAAPLSDDLDSQTPLRITEFKRDILGRLIHTLARD NDKVQETAYQYDPDGNLVRAANRHSITCFDYNENGQLIARHQWKVPSKEENARNGLPETD WRDAQYDMLYLPVTETVRYHYDFNGNRTATVLPDGRQINYLYYGSGHLHQISLDDEVITD IER >gi|257257202|gb|ACDX02000030.1| GENE 2 918 - 1355 306 145 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261365867|ref|ZP_05978750.1| ## NR: gi|261365867|ref|ZP_05978750.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 145 1 145 145 241 100.0 1e-62 MINYININLDSDLSKIKIEKDKPVVALISQNYLKTINYNDLFKLIKQYPLFWIVLIGENS DILEDEFDTLLELESIKNDEMLNVVTTNFQFRNLTVTDIEDISYEFLILPCPNGNCQYLS FLDLNHTSDRKIFDFIKTQLNNKVT >gi|257257202|gb|ACDX02000030.1| GENE 3 1381 - 2949 1112 522 aa, chain - ## HITS:1 COG:YPO3609 KEGG:ns NR:ns ## COG: YPO3609 COG3209 # Protein_GI_number: 16123751 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Yersinia pestis # 17 351 9 326 456 191 37.0 2e-48 MTEGGKGKTKVAAGYSQTAVKRSYGYDRTGNLTHSTDQRTGTTHFEYDKLGRITKAGNER FAFDPAHNILDIPTEKVKPYPAPSPVGEGKTTAPLSDDRSAITDNRLKTYNGTTYYYDDL GNLIHRELADGEVQNYFYDLYDQLVKAEIFKKDGTKETWAYSYDALGRRIGKGRLKNEEV SETSFPHDLGGNGLENQTRFVWDGSHLLQEIQPDGRYTYIYTDQDSYEPLAQVRDWTTED GENRQQTHYFHCDQIGIPREMTDRDGNLLWFGNYTGWGRLKEETKVKDSAYQPFRLQNQY ADRETGLHYNFFRYYEPVCGRFIKQDPIRLEGGTNLYSFASNVQNWIDPLGLFAFAIPLI IEAGAIIKGLLFVGSAAAVGYAGSKAIQAAQSQSQTKTQAIAKPVPPAIAQSKAGKKGCG KCTRANNSIAGAGAGAPMPPEDNDDKDKNLSISDKRSIRSYKKQIKNHKKKIEEFKNNPT VRPGMEKLPKEVIKAQQESRIRHLEREIKAFQKNIDDIYKKY >gi|257257202|gb|ACDX02000030.1| GENE 4 3546 - 4076 490 176 aa, chain - ## HITS:1 COG:PM1462 KEGG:ns NR:ns ## COG: PM1462 COG0666 # Protein_GI_number: 15603327 # Func_class: R General function prediction only # Function: FOG: Ankyrin repeat # Organism: Pasteurella multocida # 10 176 7 174 174 148 54.0 4e-36 MENKLPPETLGEKIVGANWEGDIAFLQKMANTGQFNPLHITDSEKWNYLHRANLINPSPV ETVKFYLDKGVEVNAQDVYGMTPLHYAMRAKNGDAALALLEAGADPNIPNIDNTIPLAMI GGMPERLDVLEKMLQCGANVHYKSGNSGLEILELIKTYFSEEEAFKAIIAIMEKYA >gi|257257202|gb|ACDX02000030.1| GENE 5 4066 - 8499 4792 1477 aa, chain - ## HITS:1 COG:STM0291 KEGG:ns NR:ns ## COG: STM0291 COG3209 # Protein_GI_number: 16763674 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Salmonella typhimurium LT2 # 144 1264 225 1265 1364 389 29.0 1e-107 MAFNKIARKSSDFRVVFTVPDFCWPPPPAPPVAPPIPFPLFADLGGAQTVATDVRLNRKP AFVFNASKTNRTTGDEPAVPGRKGVLSRTATKPAWPMMHSSSVKIRKRYIIRAGDMFHMN NKFKKKLPPKPCISCKAAAAAGRPVNPIHGLKFLEGETDFAFEGILPLVWSRSYYSDQDG IGWLGEGWSVPGCQRIIRDAAGLAYIDDQGRLFPLPEVDEDDEEPVLFESEQIWFSKNPD GHYVIASLDGSIALRFAPLVVAEDGSDEDSTLFPLVAVEDANGNHQRFVYHPLTGLPQYV IDGNGRVFSLNFGNVADGQSPKMRLLSVSLLEGLPVFGEAVRVGSPLVRYEYNSSGDLLR VIGRDGNVKRSFGYKNNLMVSHTDAAGLVSEYEYDHYTPTGKVLRNRTSLGEEWRFTYHD GYTEVTDVLGRTEQYHYDYNNELTKRVFADGSAVLMERDGLGRLLSHTDAMGRVTRYQYS NEGQVETIVRPDGAILHFDYDDCYRLIRKSDAEGRYDGYTYDEAGNLLTHTDPLKHTTRF EYADNGLLLSVTDPNGSSTAYHYNENRQPDLITDCSGYETRLAYTPEGQLARITDALGQH TEYHYDADQNLTLALYPDGSKETFGYDAAGRLKTHTDGEGHTTSYEYGQDGLPTRRTNAL GHTFGYHYDKARRLVGLTNENGARYRFAYDVLDRLIAESGFDHKLTGYRYNAGNELVEQR EFGILNIPVDTNLSDGLNDCTPLIVNDYIRDGSGRLKHIEVHSQNGSVQHRSYHYDTDGR LVRAATSGHSSAFDYNAGGDLIGEYALRLPDAASCAAQGLPELDWQNPEHDMFLLDRSAD IRYFYSSGGNLTTVELPDGQRIQNLYYGSGHLHSILFDGDTVTDIEHDKLHREISRTQGA LTSRYELDTLGRLKKQIAQLTALTKTNKGKYTHAAVSRNYGYDRTGNLTHTTDQRSGTTH FEYNKLGRIAKADSELFAFDPAHNLLSTQTNNTSDSAATPLSDGLKAVSDNRIREYNGTK FFYDGFGNTIHKEHLDGTTQNLYYDLFHQLVKTETFRHNPNTGGWEKETWVYDYDAMGRR IRKGSLKADGSLGEATEFIWSGSRLLQEVYDNGRYTYIYTDTDSYEPLAQIHNYTNEEGE THQDINYFHCDQIGIPREMTDEDGKLLWFGKYDVWGKLVKETNITGSAHQPFRLQNQYFD RETGLHYNFFRYYDPDIGRFVNQDPIGLDGGENLYGFAPNAAVWSDPLGLEPMDIGKYIP DEYRPKQGWKPPFEMPSYEDVDALSQKYLRKSLNEMLEDALLSMASGGMRAPKAKIPKMA PKPQTKMPQKPNCGVGKCAGKRDAQGKYRDSKGRYANDPNKLNTKLTRPSLRSQTEKDVY ARYTKLPNGSYMNKDTFEVVKPPIHIGHKYGWENRRILKAADELGMSQKQVNDYVNARPQ NLKLENAKDNLSHKFEKPGIDELQDIKRDMRKFLNGK >gi|257257202|gb|ACDX02000030.1| GENE 6 8813 - 9205 124 130 aa, chain - ## HITS:1 COG:RSp0097 KEGG:ns NR:ns ## COG: RSp0097 COG0666 # Protein_GI_number: 17548318 # Func_class: R General function prediction only # Function: FOG: Ankyrin repeat # Organism: Ralstonia solanacearum # 5 106 2 103 150 87 41.0 4e-18 MKKELTNILKKYETHPDFLGDAIEDINQVGGMDDTVLHIAARNNSLNDALIFLQNGALID LKGDLGYTPLHYACMFGNIEMVRLLLDNGSDKNIQNEFGENAVRVATNSSSENKEMIVKL LNNFKRKKRK >gi|257257202|gb|ACDX02000030.1| GENE 7 9258 - 11330 2138 690 aa, chain - ## HITS:1 COG:STM0291 KEGG:ns NR:ns ## COG: STM0291 COG3209 # Protein_GI_number: 16763674 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Salmonella typhimurium LT2 # 51 554 789 1254 1364 236 35.0 1e-61 MAQLGGQPVPKRDAAPLSDDLDSQTPLRITEFKRDILGRLIHTLARDNDKVQETAYQYDP DGNLVRAANRHSITCFDYNENGQLIARHQWKVPSKEENARNGLPETDWRDAQYDMLYLPV TETVRYHYDFNGNRTATVLPDGRQINYLYYGSGHLHQISLDDEVITDIERDKLHREIFRT QGKLASRYELDPLGRLKRQIATLNDLTEGGKGKTKVAAGYGQTAVKRSYGYDRTGNLTHS TDQRTGTTHFGYDKLGRITQAGNELFAFDPAHNILDIPTEKVKPYPAPSPVGEGRGEGKT TTPLSDDRSAVPDNRLKTYNGTTYYYDNLGNLIHRELADGEVQNYFYDLHDQLVKAEIFK KDGTKETWAYSYDALGRRIGKGRLKDGEVSGSLEDATGFVWDGSHLLQEVQLDGRYTYIY TDPDSYEPLAQIRDWTTEDGESCQQTHYFHCDQIGIPREMTDKDGNLLWFGNYTGWGRLK EETKVTDSAYQPFRLQNQYCDEETGLHYNFFRYYEPECGRFINQDPIGLMGGSNFYQFAP NTQTWFDLFGLSATGAVLSGLGVDLTIVEPTDAVPQKWAGWGIALALAVVTDAGIWVYSK LQANSKSQAEERQREYEIAKNFCDTPPQPGDNKCATLHRQIEHAKKCIELYEEWDKKWLP GRHAQKIQERKNRLNNLKEEHKKNCVTSNK >gi|257257202|gb|ACDX02000030.1| GENE 8 11891 - 12265 202 124 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261365874|ref|ZP_05978757.1| ## NR: gi|261365874|ref|ZP_05978757.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 124 19 142 142 223 100.0 4e-57 MSYSNFQKRKQFKHSSKWLYDDDNIESGFSIFWKGLEIGFRDEVIYLLSIDPYFKGVTIA KKYKINRKLTIEKFVQYLFFADIKWKFVSREEWEHECEIKTEGGVSIIFTFELDGLRISK FSVS >gi|257257202|gb|ACDX02000030.1| GENE 9 12330 - 12872 325 180 aa, chain - ## HITS:1 COG:STM0292 KEGG:ns NR:ns ## COG: STM0292 COG3209 # Protein_GI_number: 16763675 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Salmonella typhimurium LT2 # 1 58 82 139 246 86 65.0 3e-17 MQNQYADCETGLHYNFFRYYEPDAGRFVNQDPIGLLGGENLYAFGLNTKAWMDPLGLASK ATAKMQPYRFSDVSVKGPHADIFVGNKKVTEALLTLDDKGELVWKRFGDMKSATSKELKA ADKLISELKDNSQIMSSAKDQLKKALTDFEGDLNDPKSSTRRKDIAKRGIKKFRKMLGKC >gi|257257202|gb|ACDX02000030.1| GENE 10 12921 - 13166 88 81 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261365876|ref|ZP_05978759.1| ## NR: gi|261365876|ref|ZP_05978759.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 81 1 81 81 134 100.0 2e-30 MKKIIRFISKFEKNGEKFIEVINFKNEPSLNFLQKIFHETSPMYEEYWISNEVAKIIEPY LCEKLDINNYDYFLSCEEDNI >gi|257257202|gb|ACDX02000030.1| GENE 11 13163 - 14458 1009 431 aa, chain - ## HITS:1 COG:YPO3609 KEGG:ns NR:ns ## COG: YPO3609 COG3209 # Protein_GI_number: 16123751 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Yersinia pestis # 50 418 9 394 456 196 36.0 7e-50 MHREIYRTQGKLASRYELDPLGRLKRQIATLNDLTEGGKGKTKVSAGYGQTAVKRSYGYD RTGNLTHSTDQRTGTTHFAYDKLGRITQAGNELFAFDPAHNILSDNNSPTIPDNRLKTYN GTTYYYDDLGNLIHRELADGEVQNYFYDLYDQLVKAEIFKKDGSKETWAYSYDALGRRIG KGRLKTDGSLEDETRFVWDGSHLLQEIHPDGRYTYIYTDQDSYEPLAQVRDWTTEDGENR QQTHYFHCDQIGIPREMTDKDGNLLWFGNYTGWGRLKEETKVTDSAYQPFRLQNQYCDHE TGLHYNFFRYYEPDAGRFVNQDPIGLWGGDNLYCFAPNVQRWIDPLGLAPIPAPSSLPGF PGAQRAKPKTPVQGGGGLRKRWRLPGGCILEWDSQHGEVEKYDKRGKHLGAFDPKTGKQL KDPIKNRRIEP >gi|257257202|gb|ACDX02000030.1| GENE 12 14638 - 15450 189 270 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261365879|ref|ZP_05978762.1| ## NR: gi|261365879|ref|ZP_05978762.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 270 1 270 270 437 100.0 1e-121 MAGKEISSFDAFLVCKQLSIKELFEKILNSNTVFQYEAAKRLQFYEYSEIKDNIKNILLT SRYSRHREIAIFILGQFQIKLNDIQLKEILSILICFIRNDKSIRVKSSAISSLGYLFRDY NLEEKAFSNIEKYIDLIWSLNKYSIIISVAFSSVYLPKREYIKDYLIRNLNKKNPKVLSW ILYALKEKGYKSNSIETLLIRKLKDFNETSYIYHEIVSFLISIDSTKVIPYVKKILLNQN KIDEEFYIGIKNNSSKKFSKIRKMLLKKFG >gi|257257202|gb|ACDX02000030.1| GENE 13 15452 - 18388 3427 978 aa, chain - ## HITS:1 COG:STM0291 KEGG:ns NR:ns ## COG: STM0291 COG3209 # Protein_GI_number: 16763674 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Salmonella typhimurium LT2 # 1 867 458 1253 1364 302 30.0 2e-81 AGKVLRNRTSLGEEWRFTYHDGYTEVTDVLGRTEQYHYDYNNELTKRVFADGSAVLMERD GLGRLLSHTDAMGRVTRYQYSNEGQVETIVRPDGAILHFDYDDCYRLIRKSDAEGRYDGY TYDEAGNLLTHTDPLKHTTRFEYADNGLLLSVTDPNGSSTAYHYNENRQPDLITDCSGYE TRLAYTPEGQLARITDALGQHTEYHYDADQNLTLALYPDGSKETFGYDAAGRLKTHTDGE GHTTSYEYGQDGLPTRRTNALGHTFGYHYDKARRLVGLTNENGARYRFAYDVLDRLIAES GFDHKLTGYRYNAGNELVEQREFGDDASLAAKLMAQLSGQPVPKRDAAPLSDDLDSQTPL RITEFKRDVLGRLIHTLARDNDQVQETAYQYDPDGNLVRAANRHSITCFDYNENGQLIAR HQWKVPSKEENARNGLPDTDWRDAQYDMLYLHVTETVRYHYDFNGNRTATVLPDGRQINY LYYGSGHLHQISLDDEVIADIERDQLHREIYRTQGKLASRYELDPLGRLKKQIATLNDLT EGGKGKTKVAAGYNQTAVKRSYGYDRTGNLTHSTDQRTGTTHFEYDKLGRITQAGSERFA FDPAHNILSDDRTTIPDNRLKTYNGTTYYYDDLGNLIHRELADGEVQNYFYDLYDQLVKA EIFKKDGTKETWAYSYDALGRRIGKGRLKNGEVSETSFPHDLSGNDLENQTRFVWDGSHL LQEIHPDGRYTYIYTDPDSYEPLAQVRDWATEDGESCQQTHYFHCDQIGIPREMTDKDGN LLWFGNYTGWGRLKEETKVTDSAYQPFRLQNQYADRETGLHYNFFRYYEPDAGRFVNQDP IGLMGEFNFYRFAPNVQIWIDPKGLAAFAIPLIAPELVALGEAVLLLLGLGAAHEGGKAI GTMMAANGNQVDTGVANQVYEKMNEYSRTTGKKPDKCDVLQELIDCGQISAKQAKSTQKA WGCRHSRHSKDKCNNRKK Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:23:28 2011 Seq name: gi|257257200|gb|ACDX02000031.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont30.1, whole genome shotgun sequence Length of sequence - 18339 bp Number of predicted genes - 17, with homology - 17 Number of transcription units - 8, operones - 4 average op.length - 3.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 191 - 679 174 ## COG3335 Transposase and inactivated derivatives 2 2 Tu 1 . + CDS 803 - 1123 206 ## CV_2868 hypothetical protein + Term 1361 - 1419 3.7 3 3 Tu 1 . - CDS 1822 - 2400 575 ## PROTEIN SUPPORTED gi|134277849|ref|ZP_01764564.1| ribosomal protein S16 - Term 2687 - 2738 14.4 4 4 Tu 1 . - CDS 2763 - 6443 4314 ## COG5013 Nitrate reductase alpha subunit - Prom 6572 - 6631 5.6 5 5 Op 1 6/0.000 - CDS 6868 - 7548 267 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 6 5 Op 2 23/0.000 - CDS 7545 - 8216 699 ## COG4149 ABC-type molybdate transport system, permease component 7 5 Op 3 . - CDS 8241 - 8993 830 ## COG0725 ABC-type molybdate transport system, periplasmic component - Prom 9023 - 9082 4.4 - Term 9235 - 9280 2.6 8 6 Op 1 . - CDS 9321 - 9758 504 ## COG0314 Molybdopterin converting factor, large subunit 9 6 Op 2 . - CDS 9760 - 10020 251 ## XALc_0609 molybdopterin-converting factor chain 1 protein 10 6 Op 3 . - CDS 10004 - 10477 487 ## COG0315 Molybdenum cofactor biosynthesis enzyme 11 6 Op 4 5/0.000 - CDS 10524 - 11156 372 ## COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A 12 6 Op 5 1/0.000 - CDS 11158 - 12135 826 ## COG2896 Molybdenum cofactor biosynthesis enzyme 13 6 Op 6 . - CDS 12132 - 13358 1195 ## COG0303 Molybdopterin biosynthesis enzyme - Prom 13530 - 13589 5.4 - Term 13533 - 13576 7.0 14 7 Op 1 2/0.000 - CDS 13596 - 14978 1193 ## COG2223 Nitrate/nitrite transporter 15 7 Op 2 . - CDS 15039 - 16298 1382 ## COG2223 Nitrate/nitrite transporter - Prom 16474 - 16533 5.7 - Term 16513 - 16552 9.3 16 8 Op 1 . - CDS 16580 - 17008 371 ## COG2005 N-terminal domain of molybdenum-binding protein 17 8 Op 2 . - CDS 17054 - 17716 534 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Predicted protein(s) >gi|257257200|gb|ACDX02000031.1| GENE 1 191 - 679 174 162 aa, chain + ## HITS:1 COG:NMA2184 KEGG:ns NR:ns ## COG: NMA2184 COG3335 # Protein_GI_number: 15795054 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Neisseria meningitidis Z2491 # 94 162 7 75 75 135 97.0 3e-32 MTQLAGFSDYQRVYLDETGFDRYLFRPYARSLRGQIVKAQISGKRYRRLSLVSAQVGNRL IAPMVYQNTMTGVFFEAWFQQCLLPALTQKSVIILDNARFHHMGVLREMAEKLGHKVLPL APYSPELNPIEKVWANIKRYLRTVLFDYARFDDALLSYFDFN >gi|257257200|gb|ACDX02000031.1| GENE 2 803 - 1123 206 106 aa, chain + ## HITS:1 COG:no KEGG:CV_2868 NR:ns ## KEGG: CV_2868 # Name: not_defined # Def: hypothetical protein # Organism: C.violaceum # Pathway: not_defined # 5 103 4 101 107 92 45.0 4e-18 MKCELNKNIELTEDGDNIPSDIYLIENEHQLQVELNESNIYVNFIFSSHLAMYEFGKAIM HEAIFGEGGFQEFYPMAVEASKPEVINGVRMSLDSARIFINYPIES >gi|257257200|gb|ACDX02000031.1| GENE 3 1822 - 2400 575 192 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|134277849|ref|ZP_01764564.1| ribosomal protein S16 [Burkholderia pseudomallei 305] # 9 190 2 187 194 226 59 1e-58 MNTLPTITIGLISTSDRASSGVYADEGIPALKSWLDKAVLNPIRYVEALIPDDQDEIKSV LIHMADEEHCDVIFTTGGTGPAPRDITPEATQAVLDKELPGFGEQMRRISLHYVPTAILS RQTAGVRGNSLIVNLPGRPKAIAETLGGVRSEDGSIVVPGLFGAIPYCVDLIGGDFIETD TAICTAFRPKQK >gi|257257200|gb|ACDX02000031.1| GENE 4 2763 - 6443 4314 1226 aa, chain - ## HITS:1 COG:RSp0974 KEGG:ns NR:ns ## COG: RSp0974 COG5013 # Protein_GI_number: 17549195 # Func_class: C Energy production and conversion # Function: Nitrate reductase alpha subunit # Organism: Ralstonia solanacearum # 1 1223 1 1234 1245 1857 70.0 0 MSHFLDRLKFFSQKHEPFADGHGVLTEEDRKWENAYRSRWQHDKVVRSTHGVNCTGSCSW KVYVKNGLITWETQQTDYPRTRPDLPNHEPRGCPRGASYSWYVYSAQRIKYPMMRGALAE LWREARKTKDPIEAWKWIVEDPERSKSYKSQRGLGGFVRSNWDEAYEMVAAANCYTIKKY GPDRVIGFSPIPAMSMVSYAAGARYLGLIGGVPLSFYDWYCDLPPASPQTWGEQTDVAES ADWYNSNYLLVWGSNVPMTRTPDAHFYTEVRYKGTKTVAISSDFGEMAKFSDIWLAPRQG TDAALAMAMGHVILKEFHIDNPSDYFQDYCRRLTDMPVLVCLKEDGGGYRPEYTLRASHL SDNFGEEKNPDWKVLAWNEKTDSLMLPNGSIGFRWDGSQKWNLETKAQNDQDVQAALSLK ACADDVVRVGFDYFGGEFDEEKTFRKVPVKRITLADGSSQLVATVFDLLVAQYGVDNGLG DENVAKDYFDDKPYTPKWQEKHTGVAPERVIQVAREFAQNAHDTKGRSMIIVGAGLNHWY YLDMNYRGLINMLMMCGTIGKSGGGWCHYVGQEKLRPQSGWAPLTFALDWHRPARQMAGT SFFYGHTGQYRHETVSADELLTSDAGDDMRRLTMIDYNAKAARMGWTPSAPQLETNPLDV TDAAEKAGMNPVDYTVKGLKEGSLEMSCDDPENPKNWPRNMFIWRSNILGSSGKGHEYFL KYLLGTQNGLMSDEDDCLKPAEVKQREGVEGKLDLFTLLDFRMNTTCLYADVIFPTATWY EKYDLNTSDMHPFIHPFTEAVQPLWQSRSDWEIYKGLAKKFSELAKDYLGVRKDIVLTPL MHDSPQELGQPFDPKDWKLGECEPIPGKTMPAMTVVERDYGAIYEKFTSIGPLLEKVNNN GKGMAWDTKHEVEFLRKLNGVQAEGVGKGQPKIETAIDACEMILTLAPETNGHVAKKAWQ ALGKATGRDHTHLINASEHTQIRFHDIVAQPRKIVTSPIWSGVESEEVCYTAGYTNVHEL IPWRTLTGRQQFYQDHKWMRDFGAAFCVYRPAVDTKTTKQLLGKMPNGNPEITLNFLTPH QKWGIHSTYSENLRMLTLSRGGPHVWISEIDAKKAGLVDNDWVEVFNTNGSIACRVIVSQ RIPETMILMYHAQEKLVHTPAAETTKKRGGIHNSVTKAVLNPTHMIGGYAQLAYSFNYYG TVGSNRDEWVIVRKMNKVDWMDEPAG >gi|257257200|gb|ACDX02000031.1| GENE 5 6868 - 7548 267 226 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 36 224 308 498 563 107 34 6e-23 MNHTDWIFDFSLQAQVAAGKKRFNLDVCCRSKARRLAIIGPSGSGKSLTLQLLAGLLPPA QGYVRINGQIYGDTAQKIWLPPQQRQVGLMFQDYALFPHLTVAQNIAFGLQHGWHNPSNR NLTESVLLWLERMQLQHISGHYPHQISGGQKQRTALARACITRPKWLLLDEPFSALDADL RQQMRQLVGELQSELSVPMLIISHDSADTNALADEVLYMENGRLNG >gi|257257200|gb|ACDX02000031.1| GENE 6 7545 - 8216 699 223 aa, chain - ## HITS:1 COG:RSp1144 KEGG:ns NR:ns ## COG: RSp1144 COG4149 # Protein_GI_number: 17549365 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, permease component # Organism: Ralstonia solanacearum # 1 218 37 253 264 199 66.0 2e-51 MWQDVWPALGLSLKVAFWATFLNLLLGIAVGFLLARRNFPGRDLLDTALTLPMVLPPTVL GYYLLVLFGRNGTIGQWLNHTFDIRLIFTWQGAVLAAMVVTFPLVFKPARAAFEGVNPQL EQAARVLGLSESAVFLRVTLPLAWRGLLVGLLLAFARALGEFGATLMIAGSIPGQTQTLS IAVYEAVQAGNDSLANQLVLLISTVCITVLWTTSRLAKPKDRT >gi|257257200|gb|ACDX02000031.1| GENE 7 8241 - 8993 830 250 aa, chain - ## HITS:1 COG:RSp0106 KEGG:ns NR:ns ## COG: RSp0106 COG0725 # Protein_GI_number: 17548327 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, periplasmic component # Organism: Ralstonia solanacearum # 7 250 15 257 257 212 49.0 6e-55 MNHLSRLTALATLMLAALPLQAKDITVSAAASLKDAFQEIAAQYKHQHPDVDVKLNTAGS GALLQQLLQGAPVDVVAFADQKTMDMAAEKNAVDTSTRRTFVRNDLVLIVPKNSRTSASS LQDLKRPAINRIALSNPESVPVGRYAKAALEKAGLFTALQPKIITTQNVRHSLDYVARGE VDAGFVYRTDAVLMPQKVRITATIPLDTPVSYPIAVSTDSSDKAEAQRFLNYVLSPKGRQ VLNKYGFSRP >gi|257257200|gb|ACDX02000031.1| GENE 8 9321 - 9758 504 145 aa, chain - ## HITS:1 COG:slr0903 KEGG:ns NR:ns ## COG: slr0903 COG0314 # Protein_GI_number: 16331656 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin converting factor, large subunit # Organism: Synechocystis # 2 133 5 135 145 124 43.0 7e-29 MFFDLTEQAIDAAALRLRMLDNEQCGAFTCFEGWVRRQNDGSRVDYLVYSTYEALARKQG EAVLAQAKQRFAIEDAVCVHRYGRLEVGDMAVWVGVTAGHRDAAFAACRFIIDTIKAEVP IWKQEFYSDGQASAWLANPEGLPSG >gi|257257200|gb|ACDX02000031.1| GENE 9 9760 - 10020 251 86 aa, chain - ## HITS:1 COG:no KEGG:XALc_0609 NR:ns ## KEGG: XALc_0609 # Name: moaD # Def: molybdopterin-converting factor chain 1 protein # Organism: X.albilineans # Pathway: Folate biosynthesis [PATH:xal00790]; Metabolic pathways [PATH:xal01100]; Sulfur relay system [PATH:xal04122] # 10 86 5 81 81 77 51.0 1e-13 MTSTVEPMRITVLYFAALREQSGKEQEIRLTHAPDVAALYAELAAEYGWDLPQNRLRAAV NHAFCPWQQPLQTGDTVAFIPPIAGG >gi|257257200|gb|ACDX02000031.1| GENE 10 10004 - 10477 487 157 aa, chain - ## HITS:1 COG:AGc3103 KEGG:ns NR:ns ## COG: AGc3103 COG0315 # Protein_GI_number: 15888994 # Func_class: H Coenzyme transport and metabolism # Function: Molybdenum cofactor biosynthesis enzyme # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 3 157 7 160 163 140 53.0 6e-34 MSLTHLDEHSRSRMVDVGEKMTTRRVAVAEGWVVFPPDVYAQIQAANGQTAKGTVSEVAR LAGIMAAKNTSQLIPLCHPMMLERCKLALNYEDDEHRLHIQAEVAVSHKTGVEMEALTAV SVAALTVYDMTKALSHDIRIEQIRLVHKSGGKHDFNR >gi|257257200|gb|ACDX02000031.1| GENE 11 10524 - 11156 372 210 aa, chain - ## HITS:1 COG:SMc00143 KEGG:ns NR:ns ## COG: SMc00143 COG0746 # Protein_GI_number: 15965619 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin-guanine dinucleotide biosynthesis protein A # Organism: Sinorhizobium meliloti # 7 201 8 208 218 69 31.0 4e-12 MAGVTAARYQPLLILCGGLSRRMGTPKALLPFDGISLIHKLIKQTHPNRPVWLAAAGQIY PDTGRAYYLNDALPERQGPLAAILPALQQAHQQGEAGIYVLACDTLLHPEVVIKLLTEGS QQPVWQQSITLLADADSGCPHPLMSHWPVAVRHDLQTYLAQGKRKVTAWLDTQLCQTIGM PDAWQAVSNFNTPADFEHAVAAAKALPEVV >gi|257257200|gb|ACDX02000031.1| GENE 12 11158 - 12135 826 325 aa, chain - ## HITS:1 COG:HI1676 KEGG:ns NR:ns ## COG: HI1676 COG2896 # Protein_GI_number: 16273563 # Func_class: H Coenzyme transport and metabolism # Function: Molybdenum cofactor biosynthesis enzyme # Organism: Haemophilus influenzae # 2 325 12 337 337 308 46.0 1e-83 MSALTDSFNRRLTYLRLSVTDLCNYRCTYCLPDGYIGKAKPDELTLPEIETLAQTFARSG TRKIRLTGGEPTLRRDLADIIAICRAQPQIESVALTTNAFKLAKLFPLYRAAGIDKLNIS IDSFDPEVFYQITGKRECNNIVRALDGILEQGFYDIKVNTLLLRRYMSRTLSDALDFVRH RPVTLRFIELMQTRDNTAFFGKQHFSAATIEAGLQAEGWQLVPRSAHAGPAREYRHRDFA GGIGFIAPYSKDFCQSCNRLRVTAQGKMHLCLFGGIAYDLRPWLSSGDQAGLRQHLYELM AEKPEHHFLHDRKFGLIRDLSMIGG >gi|257257200|gb|ACDX02000031.1| GENE 13 12132 - 13358 1195 408 aa, chain - ## HITS:1 COG:moeA KEGG:ns NR:ns ## COG: moeA COG0303 # Protein_GI_number: 16128795 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin biosynthesis enzyme # Organism: Escherichia coli K12 # 4 407 5 408 411 310 43.0 3e-84 MALTSVSELQTLIHKHITRTPHLPEIEHIPVAQSIGRVLAEDMVSALNIPATDISAMDGY ALPSDAAAGSRWQIVGESAAGKPFTGDLPKDGCIRIMTGAVVPPGSTCVVLQENTETDSN TIIITQDVALGANIRYGGEEVATGDTVLTAGRILRPADVMLLAAIGIGQVPVYRKIKVAV LSTGDELNEPGTPATDNGQVYDSNRHTLMARLAAMPVEVLDLGQAADDLESVLHTLNEAS CMADVVITSGGVSVGDYDYMREAVNRLGAIHHYKVAIKPGKPFVFGQMLKTWYFGLPGNP VSGYVGFDLFLKAALWQLCGAQDIPQPFRLQAVLSQQVKKSPGRMDIQRAVLTQTADGTW EASPAGEQDSHRVWGVSRANGYIILPAEAGNLPAGATVTVQPFTEAFL >gi|257257200|gb|ACDX02000031.1| GENE 14 13596 - 14978 1193 460 aa, chain - ## HITS:1 COG:RSp0973 KEGG:ns NR:ns ## COG: RSp0973 COG2223 # Protein_GI_number: 17549194 # Func_class: P Inorganic ion transport and metabolism # Function: Nitrate/nitrite transporter # Organism: Ralstonia solanacearum # 2 460 3 461 461 542 65.0 1e-154 MSHLIEHWQPEDKTFWQQTGKKIATRNLWISIPALLLAFSIWQVWSVAVVNLPNIGFKYS ENQLFWLAALPALSGATLRIFYSFMVPIFGGRKWTAISTASLLLPAIGLGFAVQNPNTSY ITMMVLALLCGFGGGNFSSSMSNISFFFPKAEKGTALGLNAGLGNLGVSAVQFVVPLIIT AGVFGAFGGEPQTWTKGDVTKQIWLQNAGFIWVPFIILSTLAAWFGMNDLASAKASFKDQ AVIFSRKHNWIMCILYLGTFGSFIGFAAGFPLLIKSQFTGIDPVKYAFLGPLVGALARPF GGWISDKIKSGALITQFVFIGMIVAVCGVIFFLPHNGEGGNFWGFFTCFLALFALTGIGN GSTFMQVPVIFLNMHQKFAEEGKVSEEQARLDATKEGAAVIGFTAAFAAYGGFFIPKSYG TSIDLTGSVNAALIGFIVFYAICAALNWWYYTRKGAEAKC >gi|257257200|gb|ACDX02000031.1| GENE 15 15039 - 16298 1382 419 aa, chain - ## HITS:1 COG:RSp0972 KEGG:ns NR:ns ## COG: RSp0972 COG2223 # Protein_GI_number: 17549193 # Func_class: P Inorganic ion transport and metabolism # Function: Nitrate/nitrite transporter # Organism: Ralstonia solanacearum # 7 407 20 419 437 468 62.0 1e-131 MASETYKRYSVLFSSTLSFTVCFMIWMMLAVVGIKVQEEMGFNQTQYGILIALPVLSGAL IRVPLGILTDKFGGRIVLFTLMILSVPTIFLMRYANQYWHFLVIGLVMGLAGGSFSVGTP YVARWFPKHQQGVAMGIFGAGNAGSAINKFLAAWLIVTFGTWQIVPTVYSAIMLATAVLF WFTSYHDPKHLVSSNVTLKEQLALLKDPGVLRYSQYYSVVFGGYVALALWMTKYYVGEYG MPLQTAAFLAACFSLPGGVLRAFGGYLSDKFGAYKVTWAVMWLIWICFFILSYPQTYLSI RTTDGGSLTMHLGLNVTVFTILMFTVGVATAVGKASVFKFVADDYPDNIGAVSGIVGLAG GLGGFLLPIMFGALEDWTGIRSTSFMLLYGTVCVSLIWMHFSFKAKRESDMKALKERQS >gi|257257200|gb|ACDX02000031.1| GENE 16 16580 - 17008 371 142 aa, chain - ## HITS:1 COG:YPO1143 KEGG:ns NR:ns ## COG: YPO1143 COG2005 # Protein_GI_number: 16121439 # Func_class: R General function prediction only # Function: N-terminal domain of molybdenum-binding protein # Organism: Yersinia pestis # 1 141 122 262 263 64 35.0 8e-11 MKSSARNQLAGTVTHIEQSNGSCLVTLASAGGVEIHAQISSFSLKRLKLSVGSPVIAMIK AASVVLATDLAPMTLSAENCLHGTVKRVEQGSVNNVVTLDINNEINLCATITLYSSETLA LEPDRPATAVFNANQVMLGVLI >gi|257257200|gb|ACDX02000031.1| GENE 17 17054 - 17716 534 220 aa, chain - ## HITS:1 COG:NMA1419 KEGG:ns NR:ns ## COG: NMA1419 COG2197 # Protein_GI_number: 15794331 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Neisseria meningitidis Z2491 # 6 220 2 216 218 320 76.0 1e-87 MSLNETIRIALIDDHTLFRSGIKALLTRQDNYEVVGEAADGLSGVKLVEQTDPDVVLLDL DMPVMNGREALAQILSSRPEQVVVMLTVSEDCEDLTECMRLGARGFLLKNIHADFLVDAI RKAAEGDNVFSPEMTARLVQSLIQPNTPPATRALDALTTRELEILGYLAAGHSNKIIARK LNLAESTIKVHVQSILRKLELSSRVQAAVYAVQHNVPQPL Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:23:41 2011 Seq name: gi|257257198|gb|ACDX02000032.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont31.1, whole genome shotgun sequence Length of sequence - 14851 bp Number of predicted genes - 11, with homology - 11 Number of transcription units - 8, operones - 2 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 496 353 ## COG2801 Transposase and inactivated derivatives + Term 671 - 706 -0.6 - Term 439 - 479 7.3 2 2 Tu 1 . - CDS 571 - 1941 1765 ## COG0541 Signal recognition particle GTPase - Prom 2002 - 2061 6.9 + Prom 1944 - 2003 6.1 3 3 Tu 1 . + CDS 2058 - 2864 536 ## COG4137 ABC-type uncharacterized transport system, permease component + Term 2894 - 2956 17.0 + SSU_RRNA 3401 - 4898 99.0 # EU341184 [D:1..1499] # 16S ribosomal RNA # uncultured Neisseria sp. # Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria; environmental samples. + TRNA 5032 - 5108 96.8 # Ile GAT 0 0 + TRNA 5114 - 5189 93.7 # Ala TGC 0 0 + LSU_RRNA 5623 - 8512 98.0 # CP001050 [R:1263410..1266299] # 23S ribosomal RNA # Neisseria gonorrhoeae NCCP11945 # Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria. + 5S_RRNA 8609 - 8717 100.0 # CP000381 [D:61720..61828] # 5S ribosomal RNA # Neisseria meningitidis 053442 # Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria. + Prom 8937 - 8996 7.2 4 4 Tu 1 . + CDS 9069 - 9368 451 ## COG1555 DNA uptake protein and related DNA-binding proteins + Term 9423 - 9460 3.1 5 5 Tu 1 . - CDS 9798 - 11303 1306 ## Cpin_0250 zinc finger SWIM domain protein - Term 11676 - 11712 -0.9 6 6 Op 1 . - CDS 11811 - 12374 67 ## APJL_1765 hypothetical protein 7 6 Op 2 . - CDS 12392 - 12799 241 ## APJL_1764 hypothetical protein - Prom 12819 - 12878 5.3 8 7 Tu 1 . - CDS 12972 - 13487 -131 ## APJL_1764 hypothetical protein - Prom 13524 - 13583 8.2 + Prom 13512 - 13571 9.5 9 8 Op 1 . + CDS 13607 - 14026 371 ## Aasi_1471 hypothetical protein 10 8 Op 2 . + CDS 14082 - 14402 431 ## COG3293 Transposase and inactivated derivatives 11 8 Op 3 . + CDS 14399 - 14849 72 ## gi|261365774|ref|ZP_05978657.1| conserved hypothetical protein Predicted protein(s) >gi|257257198|gb|ACDX02000032.1| GENE 1 2 - 496 353 164 aa, chain + ## HITS:1 COG:RSc2408 KEGG:ns NR:ns ## COG: RSc2408 COG2801 # Protein_GI_number: 17547127 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Ralstonia solanacearum # 1 159 115 274 278 164 55.0 6e-41 AKKPNEKWLTDVTELKGKDGKLYLSPILDLFNREIIAYAMSRRADSEMVKEMLEKAAPRL TDKGTMLHSDQGVLYRTAEYRKLIAKHSMVQSMSRKANCWDNAPMESFFAVLKTECFYRA GELTVDELMKQIDDYMDYYNRERCSLKLKKLSPVAYRTQLTQSA >gi|257257198|gb|ACDX02000032.1| GENE 2 571 - 1941 1765 456 aa, chain - ## HITS:1 COG:NMB0295 KEGG:ns NR:ns ## COG: NMB0295 COG0541 # Protein_GI_number: 15676217 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal recognition particle GTPase # Organism: Neisseria meningitidis MC58 # 1 456 1 456 456 768 91.0 0 MLDNLTNRFSKVFKNIRGQAKLTEDNIKEALREVRLALLEADVALPVVKEFVNNVKEKAL GQEVTGSLTPDQAFIGVVNQALIELMGKENSSLDLAAVPPAVVLMAGLQGAGKTTTVGKL ARLLKNEQKKKVLVVSADVYRPAAIEQLRLLAEQVGIDFFPSDANQKPVEIATAAIDYAK KHFYDVLMVDTAGRLAIDEEMMNEIKALHAAVKPVETLFVVDAMLGQDAVNTAQAFNEAL PLTGVILTKMDGDSRGGAALSVRHVTGKPIKFIGIGEKITGLEPFYPDRIASRILGMGDV LSLIEDVQKGIDEEAAAKMAKKLQKGKGFDLNDFKEQIQQMRNMGGLESLMSKMPGELGQ ISKQIPEGTAEKAMGKVEAIINSMTPKERANPTLLKASRKRRIAAGAGTSVEEVNKMLKQ FEQSQQVMKMFSGKGLGKLMRMAKGMKGMKGMFPGM >gi|257257198|gb|ACDX02000032.1| GENE 3 2058 - 2864 536 268 aa, chain + ## HITS:1 COG:NMB0296 KEGG:ns NR:ns ## COG: NMB0296 COG4137 # Protein_GI_number: 15676218 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Neisseria meningitidis MC58 # 1 268 1 268 268 352 78.0 3e-97 MPTILICLILVYAGLGIFVWFNHKTRDIKDYPLKAELAVLGAALTMHGAVLLIPVIQDKV LIMGFGYSVSLIVWLMLLVYFVGSFFYRLRGLQLLLYPCAAFTLLLGALFPGKYVGYQIN DLPFMSHIGTSLLAYGLFGIVTLFAVLILLLNRNLHRRRVSSLSGFLPSLLSLEKLMFQG MWVGFILLTYSVVSGTFFAEAVFGKPVTFTHKTVFGILSWLIYGGLLLKHSMTAWRGKKA AVWTIIGFVSLMFAYVGSKFVLEILLQR >gi|257257198|gb|ACDX02000032.1| GENE 4 9069 - 9368 451 99 aa, chain + ## HITS:1 COG:NMB1657 KEGG:ns NR:ns ## COG: NMB1657 COG1555 # Protein_GI_number: 15677506 # Func_class: L Replication, recombination and repair # Function: DNA uptake protein and related DNA-binding proteins # Organism: Neisseria meningitidis MC58 # 1 99 107 205 205 96 55.0 9e-21 MKKFLFAALSVLTASLSLAAVNINTASPSELEALPGIGPAKAKAIADYRQQHGAFKSVEE LKNVKGIGEGIFSKLKAEATVAPAPANTKAKNAVPSPKK >gi|257257198|gb|ACDX02000032.1| GENE 5 9798 - 11303 1306 501 aa, chain - ## HITS:1 COG:no KEGG:Cpin_0250 NR:ns ## KEGG: Cpin_0250 # Name: not_defined # Def: zinc finger SWIM domain protein # Organism: C.pinensis # Pathway: not_defined # 167 498 218 576 580 115 26.0 6e-24 MPRIHPLHLFSSHIAERGLLYFQQGKVGAVQKTSAGRYRAEVCGSENYSVWLKLDSDLYI KDGGCDCPYGWACKHMAALWYAVRAQTPEGQPDESEAQQPKKGGNPYRQQLSQIFSRTRY YDYYEAADLGFRLQNWLEDVAQEGTAALQQALPLLIPRLQDAFEKADDSDGMLGDAMYMA IDLLEEAVMENVPKRLINFLDKCLDDSRYFDFSEAGNKIYQIRARIWRLRGEWQAWQDYV AKRLAATESGWEHEFWALEGWQVLQAKGDTAAAQDFFRRHLRLPKFRQIAVEQAVGQQDW AEAERLLREGIIIAKDEGTPGTLHKWKLQLFDVLKETGKNVREIAADLAFSTSLSLPHYE AWKATFPAAEWPHEFNRLLARLSGQYSLQAEILEHEREFDRLLALLQQHLSLYMMERFAP SFPEPYHDQIVACYLKIFAVEIDEASNRKQYRQLLNQLKTLRRQYSAQRQAMEDFADEIR ERYSEKPRRPALLEELDRAGF >gi|257257198|gb|ACDX02000032.1| GENE 6 11811 - 12374 67 187 aa, chain - ## HITS:1 COG:no KEGG:APJL_1765 NR:ns ## KEGG: APJL_1765 # Name: not_defined # Def: hypothetical protein # Organism: A.pleuropneumoniae_JL03 # Pathway: not_defined # 2 182 9 185 190 111 39.0 2e-23 MINKYESIINKKNVLRKVGSTFQIIENNPGSQNRLLEVMASSGFGFTLDIPSITNWAFLK TDCPSGIKKVCDGIIVYTRSQETYFILIDLKSKKKGTGTKQILSSRFLCEWLNNLIDLHL GNFNKKPNFIGLICLAGRNTPSKGTTTHNFKYHKIDTLPDYSNMKIFTFCNQGKISVDSI IQKFKDS >gi|257257198|gb|ACDX02000032.1| GENE 7 12392 - 12799 241 135 aa, chain - ## HITS:1 COG:no KEGG:APJL_1764 NR:ns ## KEGG: APJL_1764 # Name: not_defined # Def: hypothetical protein # Organism: A.pleuropneumoniae_JL03 # Pathway: not_defined # 1 135 336 471 471 165 63.0 6e-40 MLDEPELNLHPSNQRVIARIVTKLVNAGINVILSTHSDYFVREINSLVMLSDEQGDPSTK SELMTKYSISEDCVINKDKIGAYLFKDNNVKPMEITNEGIIATTFDEEINLLNESSDDIY YSYVEPIGADDKITD >gi|257257198|gb|ACDX02000032.1| GENE 8 12972 - 13487 -131 171 aa, chain - ## HITS:1 COG:no KEGG:APJL_1764 NR:ns ## KEGG: APJL_1764 # Name: not_defined # Def: hypothetical protein # Organism: A.pleuropneumoniae_JL03 # Pathway: not_defined # 1 171 110 276 471 207 63.0 1e-52 MFENTFFSWNIDLDTLKNNILTSEFTVNLILGLKEDTFFLATKSIGSEVELMLSNNLPDD LIGRAISSIIYKSCLGICKTNTKNVFLIPAERNGLHLFYKELSNRRTALLHHASRKQLDL KSLLHDVLGSKYAKPIADYIDWLNELPDLKKNKEKKRKYDSLHIIAEEIKK >gi|257257198|gb|ACDX02000032.1| GENE 9 13607 - 14026 371 139 aa, chain + ## HITS:1 COG:no KEGG:Aasi_1471 NR:ns ## KEGG: Aasi_1471 # Name: not_defined # Def: hypothetical protein # Organism: A.asiaticus # Pathway: not_defined # 1 129 13 147 157 96 45.0 3e-19 MKYENLIQRSDREFKRLTGVTPVLFHEMLQITTEAESRKVKSGRPHTLSLADQLLLTLSY LRHYHTQLELAAIYGLSESNVCRTIRKTEDALIRCKRFSLPKHKNPGDHTVIIDVTESPI ERPKKTAAVLQRQEKAAHG >gi|257257198|gb|ACDX02000032.1| GENE 10 14082 - 14402 431 106 aa, chain + ## HITS:1 COG:SP1928 KEGG:ns NR:ns ## COG: SP1928 COG3293 # Protein_GI_number: 15901752 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 5 103 24 124 129 81 47.0 3e-16 MGAQHDMRLARRHLTELYPYKIVIADKGYQGLAKTGLQTPKKKSKHHLLNKQDKEANRRL GKLRTVIEHINRKLKIFKILSLPYRNRRKRFGLRANLIAGLINAMG >gi|257257198|gb|ACDX02000032.1| GENE 11 14399 - 14849 72 150 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261365774|ref|ZP_05978657.1| ## NR: gi|261365774|ref|ZP_05978657.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 150 1 150 423 297 100.0 2e-79 MNIFARGLINKTQAEANATLYARAVETLAGRLNIGIRDFDAAYGGLNVVGESLLDDGVLN QALASNPPRGWVHSKNPQDAINIWTTDGREAAKNEAVFWTLDNAADTGIADTQGYSHSIS QFAAHHIYKEHGNTKTGEERGQIAVTAEDL Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:24:14 2011 Seq name: gi|257257196|gb|ACDX02000033.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont32.1, whole genome shotgun sequence Length of sequence - 13394 bp Number of predicted genes - 17, with homology - 17 Number of transcription units - 9, operones - 5 average op.length - 2.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 127 - 447 431 ## COG3293 Transposase and inactivated derivatives 2 1 Op 2 . - CDS 420 - 923 313 ## Pcryo_2499 IS1381, transposase orfA - Prom 1042 - 1101 6.9 + Prom 987 - 1046 5.1 3 2 Tu 1 . + CDS 1198 - 2061 1263 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) + Term 2082 - 2141 16.6 - Term 2074 - 2124 16.1 4 3 Op 1 9/0.000 - CDS 2167 - 2613 262 ## PROTEIN SUPPORTED gi|42519249|ref|NP_965179.1| 30S ribosomal protein S21 - Prom 2667 - 2726 1.6 - Term 2704 - 2753 12.7 5 3 Op 2 . - CDS 2783 - 2995 348 ## PROTEIN SUPPORTED gi|15677780|ref|NP_274944.1| 30S ribosomal protein S21 - Prom 3037 - 3096 4.5 + Prom 3260 - 3319 1.8 6 4 Op 1 2/0.000 + CDS 3358 - 3669 480 ## COG0278 Glutaredoxin-related protein + Term 3679 - 3732 18.9 + Prom 3709 - 3768 4.9 7 4 Op 2 2/0.000 + CDS 3796 - 4422 937 ## COG0035 Uracil phosphoribosyltransferase + Term 4433 - 4485 12.4 + Prom 4429 - 4488 4.4 8 4 Op 3 . + CDS 4626 - 4943 499 ## COG4390 Uncharacterized protein conserved in bacteria + Term 4961 - 5009 17.2 - Term 4949 - 4997 13.4 9 5 Op 1 2/0.000 - CDS 5014 - 6336 1954 ## COG0477 Permeases of the major facilitator superfamily 10 5 Op 2 . - CDS 6333 - 6530 285 ## COG3197 Uncharacterized protein, possibly involved in nitrogen fixation 11 5 Op 3 . - CDS 6530 - 6877 466 ## NMC1446 hypothetical protein - Prom 7055 - 7114 2.9 12 6 Tu 1 . + CDS 7360 - 8556 1750 ## COG0282 Acetate kinase + Term 8569 - 8625 7.2 + Prom 8640 - 8699 8.0 13 7 Tu 1 . + CDS 8814 - 10475 2268 ## COG0497 ATPase involved in DNA repair + Term 10509 - 10550 -0.7 + Prom 10553 - 10612 4.4 14 8 Op 1 2/0.000 + CDS 10634 - 11590 337 ## PROTEIN SUPPORTED gi|54303152|ref|YP_133145.1| glutathione synthetase + Prom 11639 - 11698 3.5 15 8 Op 2 2/0.000 + CDS 11744 - 12136 607 ## COG0818 Diacylglycerol kinase + Term 12143 - 12195 -0.1 + Prom 12156 - 12215 4.2 16 8 Op 3 . + CDS 12334 - 12813 749 ## COG2847 Uncharacterized protein conserved in bacteria + Term 12909 - 12949 7.3 - Term 12738 - 12799 8.0 17 9 Tu 1 . - CDS 12892 - 13392 483 ## COG2801 Transposase and inactivated derivatives Predicted protein(s) >gi|257257196|gb|ACDX02000033.1| GENE 1 127 - 447 431 106 aa, chain - ## HITS:1 COG:SP1928 KEGG:ns NR:ns ## COG: SP1928 COG3293 # Protein_GI_number: 15901752 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 5 103 24 124 129 80 46.0 6e-16 MGAQHDMRLARRHLTELYPYKIVIADKGYQGLAKTGLQTPKKKSKHHLMNKQDKEANRRL GKLRTVIEHINRKLKIFKILSLPYRNRRKRFGLRANLIAGLINAMG >gi|257257196|gb|ACDX02000033.1| GENE 2 420 - 923 313 167 aa, chain - ## HITS:1 COG:no KEGG:Pcryo_2499 NR:ns ## KEGG: Pcryo_2499 # Name: not_defined # Def: IS1381, transposase orfA # Organism: P.cryohalolentis # Pathway: not_defined # 4 138 5 146 147 101 41.0 1e-20 MKYENLIQRSDREFKRLTGVTPVLFHEMLQITTEAESRKVKSGRPHTLSLADQLLLTLSY LRHYHTQLELAAIYGLSESNVCRTIRKTEDALIRCKRFSLPKHKNPGDHTVIIDVTESPI ERPKKTDGSITAARKSGTRLKSRSYTAEKLKKSSASGRGWVLSMICV >gi|257257196|gb|ACDX02000033.1| GENE 3 1198 - 2061 1263 287 aa, chain + ## HITS:1 COG:NMB0712 KEGG:ns NR:ns ## COG: NMB0712 COG0568 # Protein_GI_number: 15676610 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Neisseria meningitidis MC58 # 1 287 4 290 290 520 95.0 1e-147 MNNAFALPVIHSGNGSLEQYIHTVNSIPMLTPEEESQLAERQQKGDLNAAKQLILSHLRV VVSIARGYDGYGLNQADLIQEGNIGLMKAVKRYEPSRGARLFSFAVHWIKAEIHEFILRN WRLVRVATTKPQRKLFFNLRSMRKNLNALSPKEAQDIADDLGVKLSEVMEMEQRMTGHDI AIMADNNDDEDSFAPIDWLADHDAEPSRQLSKQAHYALQTEGLQNALAQLDDRSRRIVES RWLQDDGGLTLHELAAEYGVSAERIRQIEAKAMQKLRGFLAEEAEAV >gi|257257196|gb|ACDX02000033.1| GENE 4 2167 - 2613 262 148 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|42519249|ref|NP_965179.1| 30S ribosomal protein S21 [Lactobacillus johnsonii NCC 533] # 1 134 1 134 147 105 38 2e-22 MSLKAQLTEDMKTAMRAKDQTALSTIRLINAAIKQFEVDERTEADDGKVIAIITKMVKQR KDSANIYAEAGRQDLADKENAEIEILHRYLPQMMSAEEIRTAVETVIAMTGASGMADMGK AMGVLKTQLAGKADMGEVNKILKAALTS >gi|257257196|gb|ACDX02000033.1| GENE 5 2783 - 2995 348 70 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15677780|ref|NP_274944.1| 30S ribosomal protein S21 [Neisseria meningitidis MC58] # 1 70 1 70 70 138 100 2e-32 MPAIRVKENEPFEVAMRRFKRAVEKTGLLTELRAREAYEKPTTERKRKKAAAVKRLQKRL RSQQLPPKMY >gi|257257196|gb|ACDX02000033.1| GENE 6 3358 - 3669 480 103 aa, chain + ## HITS:1 COG:NMA0984 KEGG:ns NR:ns ## COG: NMA0984 COG0278 # Protein_GI_number: 15793941 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin-related protein # Organism: Neisseria meningitidis Z2491 # 1 103 1 103 103 204 95.0 4e-53 MTSIHDQIKEVVTTHRVVLFMKGTKQFPQCGFSSRAVQILNAAGCTDYVTVNVLENDAVR QGIKEYSDWPTIPQLYVNGEFVGGSDILMEMFEAGELQDLLKA >gi|257257196|gb|ACDX02000033.1| GENE 7 3796 - 4422 937 208 aa, chain + ## HITS:1 COG:NMA0985 KEGG:ns NR:ns ## COG: NMA0985 COG0035 # Protein_GI_number: 15793942 # Func_class: F Nucleotide transport and metabolism # Function: Uracil phosphoribosyltransferase # Organism: Neisseria meningitidis Z2491 # 1 208 1 208 208 410 98.0 1e-115 MNVTVINHPLVRHKLTLMREADCSTYKFRTLTTELARLMAYEASRDFEIEKYIIDGWCGQ IEGDRIKGKTLTVVPILRAGLGMLDGVLDLIPTAKISVVGLQRDEETLKPVSYFEKFVDS MDERPALIIDPMLATGGSMVATIDLLKAKGCKNIKALVLVAAPEGVKAVNEAHPDVTIYT AALDSHLNENGYIIPGLGDAGDKIFGTR >gi|257257196|gb|ACDX02000033.1| GENE 8 4626 - 4943 499 105 aa, chain + ## HITS:1 COG:NMA0986 KEGG:ns NR:ns ## COG: NMA0986 COG4390 # Protein_GI_number: 15793943 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 105 1 105 106 129 66.0 2e-30 MSFQDNLAAMPDIGHLSGLDILDAQGKAVHHIPNAPGKQGSLKLYNALALNFGGKLDAAA AAQGLDWFAEHVADAQANPGKHPNIDLLLQVKNGNCSLVLKPVEA >gi|257257196|gb|ACDX02000033.1| GENE 9 5014 - 6336 1954 440 aa, chain - ## HITS:1 COG:NMB1515 KEGG:ns NR:ns ## COG: NMB1515 COG0477 # Protein_GI_number: 15677368 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Neisseria meningitidis MC58 # 1 427 1 427 436 644 82.0 0 MSLKKDNLNFPTSRRFAPLFGTQFLGAFNDNMFKTALFVMISFYGLGKNDFLPASQMLNL GALLFILPYFLFSALSGQLSTKFDKAVLARWIKVLEIVIMAVAAFGFYIQSAPLLLVCLF CMGVQSTLFGPLKYAILPDYLNDKELIMGNSLIESGTFIAILFGQILGTSVAGLPPSVVG ILVLLVAIGGTLTSLFMPRVPAKAPNTKIEWNIVKGTHALLRETAQYDSVFTSIIGISWF WFIGSVYTTQLPTFTQIHLGGNDNVFNLMLALFSIGIAAGSVLCAKLSHERLLLGLVTVG TTGLTVFGLILVWLTQGQRFTELNGITWFLSQGMAYPVMLVMTLIGFFGGFFSVPLYTWL QTASSESFRAHAVAANNIINGVFMVSAAILSAVLLMLFDSISLLYLIVAIGNIPLIVYLI QREPRFLNDMGRIFHNIGKR >gi|257257196|gb|ACDX02000033.1| GENE 10 6333 - 6530 285 65 aa, chain - ## HITS:1 COG:NMA1716 KEGG:ns NR:ns ## COG: NMA1716 COG3197 # Protein_GI_number: 15794609 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein, possibly involved in nitrogen fixation # Organism: Neisseria meningitidis Z2491 # 1 59 2 60 62 99 86.0 1e-21 MESMFILVPISIILAFAIGYFFWWSGKNGQFDDLEGPAHRILMDDDSTDKLLENEIEKEE QESEK >gi|257257196|gb|ACDX02000033.1| GENE 11 6530 - 6877 466 115 aa, chain - ## HITS:1 COG:no KEGG:NMC1446 NR:ns ## KEGG: NMC1446 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 15 115 1 99 99 159 78.0 5e-38 MSSENSGSLLRFFDMHYFSIHTQQGAHVGFFIMLPDDESEAQPQSGRFAVKLQSEEGVAA EALVPFEQTEIPQYWRVVKDRIELFFDDAPVGSLRNEYLTVSGQTFMLTDLTGAM >gi|257257196|gb|ACDX02000033.1| GENE 12 7360 - 8556 1750 398 aa, chain + ## HITS:1 COG:NMA1718 KEGG:ns NR:ns ## COG: NMA1718 COG0282 # Protein_GI_number: 15794611 # Func_class: C Energy production and conversion # Function: Acetate kinase # Organism: Neisseria meningitidis Z2491 # 1 398 11 408 408 724 93.0 0 MTQKLILVLNCGSSSLKGAVLDNESGEVLLSCLAEKLNLPDAYITFKVNGEKHKVDLSAK PDHTGAVEALMEELKAHGLDSRIGAIGHRVVSGGELYSESILVDDEVIAGIEKCIPLAPL HNPAHLLGLRAAQSIFKGLPNVVVFDTAFHQTMPEHAYTYAIPHELYEKYGLRRYGAHGT SYRYVSDETARFLGKDKKDLRMVIAHLGNGASIAAVANGECKDTSMGLTPLEGLVMGTRS GDIDPSVFSFLAENANMTITQITDMLNKKSGLLGISGLSNDCRTIEEEAANGHAGAKLAL EIFIYRLAKYIGSMAVAAGGLDALVFTGGIGENSDIIRERVLGYLGFLGLKVDSEANLKA RFGNAGVITTADSAAVAVVIPTNEELMIAHDTARLSGL >gi|257257196|gb|ACDX02000033.1| GENE 13 8814 - 10475 2268 553 aa, chain + ## HITS:1 COG:NMB0740 KEGG:ns NR:ns ## COG: NMB0740 COG0497 # Protein_GI_number: 15676638 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Neisseria meningitidis MC58 # 1 552 1 552 557 877 90.0 0 MLLALSLRDFVIVENLNLDFQSGFTVLTGETGAGKSITLDAIGLLLGDKADYSQVRSGAK EAQLSALFDISLLPNLKAQLQEQGFLDEDAEELSIRRIIDAKGKSRSFINNQAATLAQLK AVGGQLIDIHGQNAHHSLNQESAQRELLDAFAGSKEQAETVRQLYQNWVNAKKALQEAQE HAETIIIERERLEWQFNELNQLDVKQGEWEALSQSHDSLAHSAELLQAAEEVGDYIDGDN GIQRQIYQCQKLLTNLQNIEPRFAESLNMLSSIEAELGEISANMRDVAGRSDIDPNELAA QEQRMGELMGMARKYRIEPEALPQKLAEIDERLQSLQAAADLEALTQTVARNLAEYQEAA HVLSAMRHQAAGRLGEEATGHMQHLAMKGARFDIVLLPSSPTAHGLEQVQFQVAANKGNP SRPLNKVASGGELARISLALQVVTSQYTQVPTLIFDEVDTGIGGGVAEMVGKALRALGKK HQVLAVTHLPQVASCGENHWQVRKHSEGEQTVSEISVLDHQQRIEEIARMLGGEIITDTT RSHAAELISLAAA >gi|257257196|gb|ACDX02000033.1| GENE 14 10634 - 11590 337 318 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|54303152|ref|YP_133145.1| glutathione synthetase [Photobacterium profundum SS9] # 1 313 5 320 346 134 30 3e-31 MKVLFIADPMASFKTYKDTTYAMMREMAKRGWQLFHTLSGELSVQQGLVTAQAAPFEFLG AKNDDDHEWFKAADKIQTTLKDFDAVIMRTDPPFDMQYLYATQFLTLAEQQGAKVFNSGQ AMRDFNEKLAILNFSQFTAPTLVTTRSADVRAFLKEHGDIIIKPLDGMGGMGIFRLTEKD PNIGSILETLMQLDSRTIMAQRYIPEIVHGDKRILIIGGEVVPYALARIPQNGETRGNLA AGGRGVAQELSERDREIAETLAPELKRRGILLAGLDVIGSNLTEVNVTSPTGFQEIMKQK NFDVAAMFADAVEAWSKQ >gi|257257196|gb|ACDX02000033.1| GENE 15 11744 - 12136 607 130 aa, chain + ## HITS:1 COG:NMA1746 KEGG:ns NR:ns ## COG: NMA1746 COG0818 # Protein_GI_number: 15794639 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Diacylglycerol kinase # Organism: Neisseria meningitidis Z2491 # 1 126 1 126 127 164 72.0 4e-41 MKPSSYAADKKGKSGIKRIINAFGYSKDGLAAAYRYESAFRQVLWLNLILIVLTFILNFD SATKMLLIIASFVSLITELFNTAVEAAVDHTSTEKHELAKRAKDAGSAAQLLALTMLGIV WAIALWHGYV >gi|257257196|gb|ACDX02000033.1| GENE 16 12334 - 12813 749 159 aa, chain + ## HITS:1 COG:NMA1745 KEGG:ns NR:ns ## COG: NMA1745 COG2847 # Protein_GI_number: 15794638 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 159 1 157 157 238 83.0 2e-63 MKKLLVTLIAAGLVSTASAAGIKVEDGWARSTVEGMKMGGAFMKIHNDEAKQDFLVGGSS PVADRVEVHTHVNDNGVMRMREVKGGIPLEAKGVTELKPGSYHVMFMGLKKPLKEGEKVP VTLKFKNAKPQTVQLEVKTAPQSGMDHGHGHDHGGAHQH >gi|257257196|gb|ACDX02000033.1| GENE 17 12892 - 13392 483 166 aa, chain - ## HITS:1 COG:HI1721 KEGG:ns NR:ns ## COG: HI1721 COG2801 # Protein_GI_number: 16273607 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Haemophilus influenzae # 5 161 57 213 216 168 54.0 4e-42 NDPKRPNEKWLTDVTELKGKDGKLYLSPILDLFNREIIAYAMSRNANSEMVKEMLEKAAP RLTDKGTMLHSDQGVLYRTAGYRELLAQHSMVQSMSRKANCWDNAPMESFFAVLKTECFY RAGELTVDELMKQIDDYMDYYNRERCSLKLKKLSPVAYRTQLTQSA Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:24:25 2011 Seq name: gi|257257195|gb|ACDX02000034.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont33.1, whole genome shotgun sequence Length of sequence - 12886 bp Number of predicted genes - 18, with homology - 18 Number of transcription units - 9, operones - 6 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 2 - 503 122 ## SSON_3609 IS150 ORF B 2 1 Op 2 . - CDS 266 - 616 392 ## NLA_8450 transposase 3 2 Tu 1 . - CDS 735 - 1514 1434 ## COG0024 Methionine aminopeptidase 4 3 Op 1 . - CDS 1624 - 2235 529 ## gi|261365933|ref|ZP_05978816.1| putative periplasmic protein 5 3 Op 2 11/0.000 - CDS 2305 - 2916 1039 ## COG2823 Predicted periplasmic or secreted lipoprotein 6 3 Op 3 11/0.000 - CDS 2989 - 3582 862 ## COG0279 Phosphoheptose isomerase 7 3 Op 4 . - CDS 3587 - 3934 354 ## COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase - Prom 4033 - 4092 5.9 + Prom 3902 - 3961 4.3 8 4 Op 1 . + CDS 3990 - 4877 1009 ## COG0313 Predicted methyltransferases 9 4 Op 2 . + CDS 4944 - 5315 391 ## COG3189 Uncharacterized conserved protein + Prom 5318 - 5377 3.9 10 5 Op 1 . + CDS 5412 - 6191 935 ## COG0708 Exonuclease III 11 5 Op 2 . + CDS 6151 - 6522 455 ## NMO_0086 hypothetical protein 12 5 Op 3 . + CDS 6533 - 7063 771 ## NMA0350 hypothetical protein + Term 7094 - 7141 13.1 + Prom 7095 - 7154 3.0 13 6 Op 1 . + CDS 7324 - 8133 1083 ## COG0428 Predicted divalent heavy-metal cations transporter + Term 8137 - 8175 2.0 14 6 Op 2 . + CDS 8205 - 8696 284 ## NGO1792 hypothetical protein + Term 8726 - 8767 3.1 + Prom 8798 - 8857 7.9 15 7 Tu 1 . + CDS 9100 - 9393 568 ## NLA_2290 hypothetical protein + Term 9418 - 9464 13.1 + Prom 9414 - 9473 7.0 16 8 Op 1 . + CDS 9529 - 11481 2670 ## COG0525 Valyl-tRNA synthetase 17 8 Op 2 . + CDS 11346 - 12359 1528 ## COG0525 Valyl-tRNA synthetase + Term 12386 - 12418 0.5 18 9 Tu 1 . + CDS 12465 - 12815 383 ## NLA_8450 transposase Predicted protein(s) >gi|257257195|gb|ACDX02000034.1| GENE 1 2 - 503 122 167 aa, chain - ## HITS:1 COG:no KEGG:SSON_3609 NR:ns ## KEGG: SSON_3609 # Name: not_defined # Def: IS150 ORF B # Organism: S.sonnei # Pathway: not_defined # 76 161 70 162 297 69 44.0 6e-11 MDTRLSRRRHRRTRTSPIQNHDRPPQKPLHRRQTRPRKNTGRAYRRVVLYARKGCLPKGV KSPQPKADRKGQSQTVQTLRAQHPLKYLLHIANLPKSSFYYHHQDRPDPDEADKALLVET YQRHKGRYGQRRIAAALDWNRKKVARLMKQMELKALIRAKKAYPPSA >gi|257257195|gb|ACDX02000034.1| GENE 2 266 - 616 392 116 aa, chain - ## HITS:1 COG:no KEGG:NLA_8450 NR:ns ## KEGG: NLA_8450 # Name: not_defined # Def: transposase # Organism: N.lactamica # Pathway: not_defined # 1 116 106 221 221 208 96.0 5e-53 MSKYTLHFKYQAVLHYLHIRSQQRTADHYGISRTHLRRWIRAYQEGGIGALEHPQSKTMT DHRKNPFIADKPDHEKTQAELIEELCYMRAKVAYLKELKALSQKRTEKDKAKPSKH >gi|257257195|gb|ACDX02000034.1| GENE 3 735 - 1514 1434 259 aa, chain - ## HITS:1 COG:NMA0337 KEGG:ns NR:ns ## COG: NMA0337 COG0024 # Protein_GI_number: 15793347 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionine aminopeptidase # Organism: Neisseria meningitidis Z2491 # 1 259 1 259 259 517 96.0 1e-147 MNEIIIKTPEEIEKMRELGKLVAEALDYIGQFVKPGVTTNEIDKLVYDYHVNVQGGYPAP LHYGNPPYPKSCCTSVNHVICHGIPDDKPLKEGDIINIDLTIKKDGFHGDSSRMFTVGKV SPIAQRLIDITHESMMAGIAAVKPGATLGDIGYACQQVAENAGYSVVQEFCGHGIGRGFH EAPQVLHYGRKGQGVVLKPGMIFTIEPMINQGKRHLRILNDGWTVVTKDRSLSAQWEHEV LVTETGYEILTVSPATGKP >gi|257257195|gb|ACDX02000034.1| GENE 4 1624 - 2235 529 203 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261365933|ref|ZP_05978816.1| ## NR: gi|261365933|ref|ZP_05978816.1| putative periplasmic protein [Neisseria mucosa ATCC 25996] putative periplasmic protein [Neisseria mucosa ATCC 25996] # 1 203 1 203 203 213 100.0 7e-54 MSKKQNESFQLKPKHLIRAALVISIIAVGALIVGIIGTLNTKPDTSNTQSAQPAPKDEGV EVWRPNGTVEPKKIIAGSEDETSEQEKTASQNPVIPPQNQSEKRRAKAQPDAKNKDKNND QHDQTPPAQTETAEIKAKPAQSTPAEQPQAQAPTQPAKTEVHETKGESKPAPQPAPKPAQ PKPAQPKPVQPKPQSKDVMDNLF >gi|257257195|gb|ACDX02000034.1| GENE 5 2305 - 2916 1039 203 aa, chain - ## HITS:1 COG:NMB2091 KEGG:ns NR:ns ## COG: NMB2091 COG2823 # Protein_GI_number: 15677911 # Func_class: R General function prediction only # Function: Predicted periplasmic or secreted lipoprotein # Organism: Neisseria meningitidis MC58 # 1 201 1 201 202 279 78.0 2e-75 MNIKRHTAPVLTALLLSLTLSGCIGVLLGGAAVGTKSAVDRRTTGAQTDDNVMAVRVETT ARSYLRQNNQAHGYTPKINVVGYNRHLLLLGQVATEGEKQFVEQIARAEQAAEGVYNYIT VASQERTIGDVTNDTWGTSKVRTTLLGLKPATQARVKIVTYGNVTYVMGVLTPEEQEQVT RRVSTTVGVQKVVTLYQNYTQPE >gi|257257195|gb|ACDX02000034.1| GENE 6 2989 - 3582 862 197 aa, chain - ## HITS:1 COG:NMA0340 KEGG:ns NR:ns ## COG: NMA0340 COG0279 # Protein_GI_number: 15793350 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoheptose isomerase # Organism: Neisseria meningitidis Z2491 # 1 197 1 197 197 347 94.0 6e-96 MTTLQERVAAHFAESILAKQKAEKVLVEPTAQAAELMLQCLMNDGKILACGNGGSAADAQ HFAAEMTGRFEKERMELAAVALTTDTSALTAIGNDYGFDHVFSKQVRALGRVGDVLVGIS TSGNSANVIEAIKAAHERDMHVIAMTGRDGGKIAAMLKDTDVLLNVPYPRTARIQENHIL LIHAMCDCIDSMLLEGM >gi|257257195|gb|ACDX02000034.1| GENE 7 3587 - 3934 354 115 aa, chain - ## HITS:1 COG:NMA0341 KEGG:ns NR:ns ## COG: NMA0341 COG0792 # Protein_GI_number: 15793351 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease distantly related to archaeal Holliday junction resolvase # Organism: Neisseria meningitidis Z2491 # 1 115 1 115 115 206 85.0 8e-54 MRLNHKQGVAGEDAALAFLLLQGCKLVARNWHCAYGEIDLIVKNGNMILFVEVKYRKNQG FGGAAYSISPSKLLKLQRSAEYYLQQNGMTDSACRIDAVLIEGNRPPEWIKNITG >gi|257257195|gb|ACDX02000034.1| GENE 8 3990 - 4877 1009 295 aa, chain + ## HITS:1 COG:NMB2088 KEGG:ns NR:ns ## COG: NMB2088 COG0313 # Protein_GI_number: 15677908 # Func_class: R General function prediction only # Function: Predicted methyltransferases # Organism: Neisseria meningitidis MC58 # 1 289 1 289 291 468 84.0 1e-132 MFQKHLQKAADSIEKRTLYVVATPIGNLADITLRALSVLQKADIICAEDTRVTAQLLSAY GIQGKLVSVREHNEQQMADKIINHLSDDLTVAQVSDAGTPAVCDPGAKLARRVREAGFKV VPVVGASAVMGALSVAGVTEPNFYFNGFLPPKSGERQKLLAKWAQADFPVVMFETPHRIE ATLADMAALFPERSLTLAREITKTFETFLSGTVTEIQTTLKNDGNQARGEMVLILHPAPR EKHDTLPDAAQNVMKILAAELPTKQAAELAAKITGEGKKALYDLALEWKRVSDDV >gi|257257195|gb|ACDX02000034.1| GENE 9 4944 - 5315 391 123 aa, chain + ## HITS:1 COG:SMb21412 KEGG:ns NR:ns ## COG: SMb21412 COG3189 # Protein_GI_number: 16264987 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Sinorhizobium meliloti # 4 115 27 136 141 79 41.0 2e-15 MFTVQRIYRYLPADGQTAVFIDRLYPRGVTKEKFASVLWLKDITPSAALRRWYHENPGQN FDGFVTRYHEELQGGVQQRAVARLLELEKQNGRVWLLTAVKNPQRSHVSALAQFLGAAFE YRE >gi|257257195|gb|ACDX02000034.1| GENE 10 5412 - 6191 935 259 aa, chain + ## HITS:1 COG:NMA0348 KEGG:ns NR:ns ## COG: NMA0348 COG0708 # Protein_GI_number: 15793359 # Func_class: L Replication, recombination and repair # Function: Exonuclease III # Organism: Neisseria meningitidis Z2491 # 1 259 1 259 259 510 94.0 1e-145 MLKIISANVNGIRSAYKKGFYEYIATSGADIVCVQELKAQEADLSDEMKNPHGMHGHWHC AEKRGYSGVAVYSKRAPDNVQIGMGIEEFDREGRFVRCDFGKLSVISLYLPSGTSAPERQ ELKYRFLDAFYPMLEAMKAEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIG KVIHTLGWTDMWRTLYPDNPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAVKAVSAHVYK DEKFSDHAPLVVEYDYAAQ >gi|257257195|gb|ACDX02000034.1| GENE 11 6151 - 6522 455 123 aa, chain + ## HITS:1 COG:no KEGG:NMO_0086 NR:ns ## KEGG: NMO_0086 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 9 123 2 116 116 145 73.0 5e-34 MPLWSWSTTMLPNKVFGKYDWNMNGKTGIGAAWVVAAFVLPMLVWTIFMLARMSGWVEMT RANPLWAVVWLLFSLPCLLIAAKCFGWKGWRLIANILICLATCAVLSVPAALLITFTLND LLK >gi|257257195|gb|ACDX02000034.1| GENE 12 6533 - 7063 771 176 aa, chain + ## HITS:1 COG:no KEGG:NMA0350 NR:ns ## KEGG: NMA0350 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_A # Pathway: not_defined # 1 176 1 176 176 243 73.0 3e-63 MRTFELEDLTLFLIRDADEAEMWIDRWAVSYPVVQTAAASASQSIAQWQANIQTAFEGIS SEHTAVVAHGAGVSAFLAWLYQTDILTQKKIVNIILVSPRPEAFPDDEIHTFQRVRCPCR TALVIAEQNGTPRNWAEERANLWNARLLLSPHSGTLNGALGGWQWGMKLMQEMLLS >gi|257257195|gb|ACDX02000034.1| GENE 13 7324 - 8133 1083 269 aa, chain + ## HITS:1 COG:NMB0175 KEGG:ns NR:ns ## COG: NMB0175 COG0428 # Protein_GI_number: 15676102 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted divalent heavy-metal cations transporter # Organism: Neisseria meningitidis MC58 # 1 269 1 269 269 421 88.0 1e-118 MLDIALPNLITAFGITLAAGLFTVLGSGLVMFSKTPNPRVLSFGLAFAGGAMVYVSLTEI FNKSSEAFAQVYDKDKAFAAATLAFLAGMGAIALIDRLVPNPHETLDPHDPAFQENKRRH IARVGMMAAFAITAHNFPEGLATFFATLENPAVGMPLAFAIAIHNIPEGISIAAPVYFAT RNRKKTVLACLASGLAEPLGAVLGYTMLKPFLSPFVFGAVFGVIAGVMVFLALDELLPAA KRYSDGHETVYGLTSGMAVIALSLVLFHF >gi|257257195|gb|ACDX02000034.1| GENE 14 8205 - 8696 284 163 aa, chain + ## HITS:1 COG:no KEGG:NGO1792 NR:ns ## KEGG: NGO1792 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae # Pathway: not_defined # 1 162 33 191 191 142 48.0 4e-33 MYLEQEKPYRPLLTALIFAALPLALLIHDVFAMIAGGGGLLFSRQDGGWSVEKGWNDSAV WLVAGVFFFFNLLIAAVLVKTALKKMLRRYTRHALFLAGMAACAAAAVCLMLEAVLGSTA LGGMRNGGILCYTVGVWMIAMMTLPKQLTRAIVQPITFYPRKR >gi|257257195|gb|ACDX02000034.1| GENE 15 9100 - 9393 568 97 aa, chain + ## HITS:1 COG:no KEGG:NLA_2290 NR:ns ## KEGG: NLA_2290 # Name: not_defined # Def: hypothetical protein # Organism: N.lactamica # Pathway: not_defined # 1 97 1 97 99 128 67.0 7e-29 MKSFEKIDNIRDIRKKLGLNQMDFWSRIGVTQSGGSRYESGRNMPKPVRELLRLVHIERV DLAKVNRDDLAIASLLKNRDPELYASLKKEAKSDKGK >gi|257257195|gb|ACDX02000034.1| GENE 16 9529 - 11481 2670 650 aa, chain + ## HITS:1 COG:NMB0174 KEGG:ns NR:ns ## COG: NMB0174 COG0525 # Protein_GI_number: 15676101 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Valyl-tRNA synthetase # Organism: Neisseria meningitidis MC58 # 1 631 1 627 945 1225 93.0 0 MLDKYNPAEIESKHYQNWETQGYFQPDMDLTKPSFSIQLPPPNVTGTLHMGHAFNQTIMD GLTRYYRMKGCNTAWIPGTDHAGIATQIVVERQLAAQNVSRHDLGREKFLEKVWEWKEVS GGTITQQMRRVGCSADWTREYFTMDDVRAETVTEVFVRLYEQGLIYRGKRLVNWDPVLGT AVSDLEVESVEEQGSMWHIRYPLADNPAEAVIVATTRPETLLGDVAVAVNPEDERYTHLI GKELILPLTGRTIPVIADEYVEKDFGTGCVKITPAHDFNDYEVGKRHDTRLVNVFDLEAK VLANAEVFNFKGEAQQGFALPEKYAGLDRFAARKQMVADLQEQGLLVEIKAHTLMTPKGD RTGSVIEPMLTSQWFVAMSATPNGGEPDSEFKGLSLANKAQKAVDSGAVRFIPENWVNTY NQWMNNIQDWCISRQLWWGHQIPAWYDEAGNVYVARNQAEAEKQAGKTGLTREEDVLDTW FSSALVPFSTLGWPSETDELKAFLPSNVLVTGYEIIFFWVARMIMMTTHFTGKVPFKDVY IHGIVRDHEGKKMSKSEGNVIDPVDLIDGIDLEKLLVKRTTGLRKPETAPKVEEATKNSS PKAFRAWARTHCASPWRATPASAAASTSTLNAPKATATSAINCGTPPISC >gi|257257195|gb|ACDX02000034.1| GENE 17 11346 - 12359 1528 337 aa, chain + ## HITS:1 COG:NMB0174 KEGG:ns NR:ns ## COG: NMB0174 COG0525 # Protein_GI_number: 15676101 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Valyl-tRNA synthetase # Organism: Neisseria meningitidis MC58 # 1 337 607 945 945 540 78.0 1e-153 MGADALRFTMASYASLGRSVNFDFKRAEGYRNFCNKLWNATNFVLMNTEDKDCGQDEMQP LAFTFADQWIIGKLQQAEAAVAEAFETYRFDLAAQTLYEFVWNEYCDWYIELAKVQIQTG CPTTQRTTRRTLVRVLETILRLLHPIMPFITEELWQVVAPLANAKTADSIMLAAYPQADK EKIVQTAFDKMAALKDLVEEVRKLRGEMGIAPNVKAPLFVEGSAELEGLLKYLPSLTRLT EAKLVDNLPEAEDAPVAVCNGARLMLKVEIDKAAETARLSKEAEKLQKALDKLNAKLSKP GYTEKAPAHLVEKDKADLAELEDKMAKVQNQLAKLKD >gi|257257195|gb|ACDX02000034.1| GENE 18 12465 - 12815 383 116 aa, chain + ## HITS:1 COG:no KEGG:NLA_8450 NR:ns ## KEGG: NLA_8450 # Name: not_defined # Def: transposase # Organism: N.lactamica # Pathway: not_defined # 1 116 106 221 221 206 94.0 2e-52 MSKYTLHFKYQAVLHYLHIRSQQRTADHYGISRTHLRRWIRAYQEGGIGALEHPQSKTMT DHRKNPFIVDKPDHEKTQAELIEELCYMRAKVAYLKELKALSQKRTAKDKAKPSKH Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:25:03 2011 Seq name: gi|257257193|gb|ACDX02000035.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont34.1, whole genome shotgun sequence Length of sequence - 12067 bp Number of predicted genes - 23, with homology - 23 Number of transcription units - 8, operones - 4 average op.length - 4.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 39 - 68 1.1 1 1 Tu 1 . - CDS 131 - 844 724 ## COG2932 Predicted transcriptional regulator - Prom 912 - 971 5.5 + Prom 944 - 1003 5.8 2 2 Op 1 3/1.000 + CDS 1047 - 1310 199 ## COG3423 Predicted transcriptional regulator 3 2 Op 2 6/0.000 + CDS 1354 - 3351 1132 ## COG2801 Transposase and inactivated derivatives 4 2 Op 3 . + CDS 3391 - 4308 674 ## COG2842 Uncharacterized ATPase, putative transposase + Prom 4310 - 4369 7.0 5 2 Op 4 . + CDS 4398 - 4664 220 ## NMA1287 hypothetical protein 6 3 Tu 1 . + CDS 4800 - 4997 147 ## gi|261365953|ref|ZP_05978836.1| cadmium translocating P-type ATPase 7 4 Op 1 . + CDS 5120 - 5329 117 ## gi|261365954|ref|ZP_05978837.1| putative type II secretion pathway protein L 8 4 Op 2 . + CDS 5326 - 5502 174 ## gi|261365955|ref|ZP_05978838.1| conserved hypothetical protein 9 4 Op 3 . + CDS 5495 - 5857 171 ## NGK_0638 putative phage associated protein 10 4 Op 4 . + CDS 5926 - 6177 151 ## NGO0464 putative phage associated protein 11 4 Op 5 . + CDS 6174 - 6344 134 ## NMC1052 hypothetical protein 12 4 Op 6 . + CDS 6341 - 6538 254 ## gi|261365957|ref|ZP_05978840.1| pyrophosphate-energized proton pump 13 4 Op 7 . + CDS 6549 - 6989 414 ## gi|261365958|ref|ZP_05978841.1| hypothetical protein NEIMUCOT_06565 14 4 Op 8 . + CDS 6971 - 7813 481 ## HD0107 hypothetical protein 15 4 Op 9 . + CDS 7815 - 8060 110 ## gi|261365960|ref|ZP_05978843.1| putative head morphogeneis protein 16 4 Op 10 . + CDS 8078 - 8224 190 ## gi|261380844|ref|ZP_05985417.1| conserved hypothetical protein 17 4 Op 11 . + CDS 8217 - 8738 776 ## COG4396 Mu-like prophage host-nuclease inhibitor protein Gam + Term 8759 - 8810 16.1 - Term 8747 - 8798 6.4 18 5 Op 1 . - CDS 8817 - 9032 457 ## NMA1292 hypothetical protein 19 5 Op 2 . - CDS 9036 - 9644 912 ## COG3561 Phage anti-repressor protein - Term 9686 - 9721 5.1 20 6 Tu 1 . - CDS 9755 - 9949 210 ## gi|261365965|ref|ZP_05978848.1| conserved hypothetical protein - Prom 10164 - 10223 7.5 + Prom 10399 - 10458 5.9 21 7 Op 1 . + CDS 10493 - 10897 260 ## COG4382 Mu-like prophage protein gp16 22 7 Op 2 . + CDS 10894 - 11373 413 ## NMCC_1014 integral membrane protein + Term 11412 - 11443 2.1 + Prom 11382 - 11441 3.4 23 8 Tu 1 . + CDS 11548 - 12054 301 ## ACICU_02150 hypothetical protein Predicted protein(s) >gi|257257193|gb|ACDX02000035.1| GENE 1 131 - 844 724 237 aa, chain - ## HITS:1 COG:NMA1884 KEGG:ns NR:ns ## COG: NMA1884 COG2932 # Protein_GI_number: 15794772 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Neisseria meningitidis Z2491 # 1 237 1 234 234 335 67.0 5e-92 MTFKSRLQLLWPDSTLEEIASKIDMSYMGLNKVFAKDGLPKAETLIKIQDVTGCDLNWLL TGKGVPYLDRARPENAGAFPVSDTGAGAVDTLGNPVDLREFVFIPRYSVEAAAGHGQTVS DEKPLFCMAFRRYWIENYVTRQTDKLSVIAVKGDSMEGILNHGDNILINHAETEPRDGLY VLRIGNDLFVKNIQRLPGRLLVKSANPLYEPFEIDLTADNTDIAIIGRVEWFGRSVN >gi|257257193|gb|ACDX02000035.1| GENE 2 1047 - 1310 199 87 aa, chain + ## HITS:1 COG:NMA1883 KEGG:ns NR:ns ## COG: NMA1883 COG3423 # Protein_GI_number: 15794771 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Neisseria meningitidis Z2491 # 20 86 8 74 87 80 59.0 9e-16 MKTQKERLIEKIENAESRKQDWHRAEIVAAVRKRGKTITALSIESGLSANTLKSALQFKY PKGERIISDFLGVPPQEIWPSRYPEQV >gi|257257193|gb|ACDX02000035.1| GENE 3 1354 - 3351 1132 665 aa, chain + ## HITS:1 COG:NMB1081 KEGG:ns NR:ns ## COG: NMB1081 COG2801 # Protein_GI_number: 15676962 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Neisseria meningitidis MC58 # 5 664 3 660 661 1200 90.0 0 MSNTISLEELKNLSLPNLPKNIESIRYRAKTQGWPYIEEVGKARGGRLKKYLIASLPAEI RAAIMKRQSDELAEKMPKTLPQVRPGTAMSPQVLAEAAKRLNEKQRSVADARCAVVAAVL GIKYQYGCSAKVAVAQFLRLLAEGKLDEVTLGNLETANDRSRSAKVGERTLDGWISAYLK AENATERLVALAPKVTKAVKPIESYGWLPTFMQFHNIPSAPKLAHSYRRFVQWAEAENMP VNDVPNLSMVRRVWEKLPLIMQERGRKTGAAYKSLLPYVKRDWGALKPNDVWIGDGHSFK AKVAHPVHGRPFKPEVTVIIDGCTRFVVGFSVSLAESCVAVSDALRIGVKHFGLPIIYYS DNGGGQTGKTIDHEITGITSRLGIRHETGIAGNPQGRGIIERWWKDNLIEMARQYETFAG AGMDSSTKNLMYRKMESAFNALEKGKELTVEQQKYLKKLPSWSQFIADVVKCIDEYNNRP HGELPRHPDGGHYTPKAYREMRLEQDGIAPDMLSAEELATMFMPQEVRKVQRGWLDLFNN SYFSVELAEYHKDEVRVSYDLDDASVVNVFDMDGKFITKAQVNGNSREAFPTARIDQLAE KRRKGKIKRAENAIKLANAEVNPALEQAAAWDELGHLGGNVIKAEYAVLPKTGTDDEIVL FEADM >gi|257257193|gb|ACDX02000035.1| GENE 4 3391 - 4308 674 305 aa, chain + ## HITS:1 COG:NMA1286 KEGG:ns NR:ns ## COG: NMA1286 COG2842 # Protein_GI_number: 15794215 # Func_class: R General function prediction only # Function: Uncharacterized ATPase, putative transposase # Organism: Neisseria meningitidis Z2491 # 5 305 4 304 304 494 88.0 1e-139 MTNTVNKALQQKLAEFKAKSGMNQTMLARGIGVSPASISMYLNDTYAAKGGKYETIEPKI EAFLEVQESKAQREELVLGFVSTKTTRRISEVMRDAHEAGDTVVIYGQAGLGKTQAVKNY CEKNPAAILIEANPSFTALVLMRKLAAAAKVSTVGSLNDLFESVSDRLRDSGRLIVVDEA ENLPLRALEIIRRLHDDTGCGLVLSGMPRLVANLRGKHGELVQLYSRVSVALNLGDSMPD EELEEIARAAMPEADDATIAELVKQSNGNTRRMSKLMRGAVRTANKNGIKMQSGIIKKYS TLIIR >gi|257257193|gb|ACDX02000035.1| GENE 5 4398 - 4664 220 88 aa, chain + ## HITS:1 COG:no KEGG:NMA1287 NR:ns ## KEGG: NMA1287 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_A # Pathway: not_defined # 1 88 1 88 88 126 78.0 2e-28 MQVLKKVDCKMFVARSFWRWVPVGLTVGVWCFVGGMALYGCTQEPEPIAKEPTKVQAMDR QADLEVLKMEYSYEAMSVEQKMEGIVYE >gi|257257193|gb|ACDX02000035.1| GENE 6 4800 - 4997 147 65 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261365953|ref|ZP_05978836.1| ## NR: gi|261365953|ref|ZP_05978836.1| cadmium translocating P-type ATPase [Neisseria mucosa ATCC 25996] cadmium translocating P-type ATPase [Neisseria mucosa ATCC 25996] # 1 65 2 66 66 103 100.0 5e-21 MEIWMIWMILGAALGAVIGMFLYAEGILLENERLRGILSVEVAGREVLEAWMDAAYRSRK GGGKC >gi|257257193|gb|ACDX02000035.1| GENE 7 5120 - 5329 117 69 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261365954|ref|ZP_05978837.1| ## NR: gi|261365954|ref|ZP_05978837.1| putative type II secretion pathway protein L [Neisseria mucosa ATCC 25996] putative type II secretion pathway protein L [Neisseria mucosa ATCC 25996] # 1 69 44 112 112 112 100.0 1e-23 MEKRATANMEWHREKRGTVLEFGRPAVARSVWGDSWPTAPEIMNSRYWTATDTRKADAEW ALKFRESAK >gi|257257193|gb|ACDX02000035.1| GENE 8 5326 - 5502 174 58 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261365955|ref|ZP_05978838.1| ## NR: gi|261365955|ref|ZP_05978838.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 58 1 58 58 69 100.0 1e-10 MSFKRRNSDWQAWGQHRRRATKFMVKRNREQEVAEYQAQFEDQDGKGRLKEEKEMKNG >gi|257257193|gb|ACDX02000035.1| GENE 9 5495 - 5857 171 120 aa, chain + ## HITS:1 COG:no KEGG:NGK_0638 NR:ns ## KEGG: NGK_0638 # Name: not_defined # Def: putative phage associated protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 1 92 1 92 227 111 66.0 1e-23 MDKQAVLEKIKKCLALSKSANEHEAAQAMKQAQVLMKKYEVDAVDVVLSEVSERGVGRKM AVKLAEWQWSFANMISEVFGCKCYQLGNAMFFTVWVTAPRSQPMPLMWSIGRFPPPAANF >gi|257257193|gb|ACDX02000035.1| GENE 10 5926 - 6177 151 83 aa, chain + ## HITS:1 COG:no KEGG:NGO0464 NR:ns ## KEGG: NGO0464 # Name: not_defined # Def: putative phage associated protein # Organism: N.gonorrhoeae # Pathway: not_defined # 3 80 147 224 227 79 56.0 3e-14 MGAWSAVKAFEMSDDEKAVMADYKGKKYPHMGNAVVRDAKSPELDGSAAMIEAIVKGQAA GKKVQLHHAMNGAEGVKQIGERK >gi|257257193|gb|ACDX02000035.1| GENE 11 6174 - 6344 134 56 aa, chain + ## HITS:1 COG:no KEGG:NMC1052 NR:ns ## KEGG: NMC1052 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 55 1 55 55 76 87.0 3e-13 MNEKDLIEWLEDRGELMVMKKDGEGFVIAARAPDGIWKTAEAATLTMAIEAWEEMR >gi|257257193|gb|ACDX02000035.1| GENE 12 6341 - 6538 254 65 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261365957|ref|ZP_05978840.1| ## NR: gi|261365957|ref|ZP_05978840.1| pyrophosphate-energized proton pump [Neisseria mucosa ATCC 25996] pyrophosphate-energized proton pump [Neisseria mucosa ATCC 25996] # 1 65 1 65 65 69 100.0 8e-11 MTTGMMIYLLICGLIGLALVVLALMSLIENWFKQQTKAVVLDACGMFFGLVVVLVAFLAI LGVVK >gi|257257193|gb|ACDX02000035.1| GENE 13 6549 - 6989 414 146 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261365958|ref|ZP_05978841.1| ## NR: gi|261365958|ref|ZP_05978841.1| hypothetical protein NEIMUCOT_06565 [Neisseria mucosa ATCC 25996] hypothetical protein NEIMUCOT_06565 [Neisseria mucosa ATCC 25996] # 1 146 1 146 146 285 100.0 1e-75 MNIEKFNPKKDPKYIGYIFRFLKKKAKLLETLGAYPRIVKFKDGFGWYIGWFIDDGLGDF IGSRICYGSEKIGTFCFVKTPETDVVAEVKWDEYERIGGCVLTNWHHKWVYANKQSRKCR HCGRWERKVVKTVKTVERRTLWERES >gi|257257193|gb|ACDX02000035.1| GENE 14 6971 - 7813 481 280 aa, chain + ## HITS:1 COG:no KEGG:HD0107 NR:ns ## KEGG: HD0107 # Name: not_defined # Def: hypothetical protein # Organism: H.ducreyi # Pathway: not_defined # 6 163 1 152 156 133 42.0 1e-29 MGARVMNIKCPNCGAVHSLDSLINDADASSVLRAVLEMDAEMGKAAIRYVGLFRPAKSQL SWARTAKLLNELMPMIKAQEVVRDGVSSPAPAEAWLHGFNETVNARDQGRLKLPLKSHGY LLEIVSQWQGSGLPSPQSSPTGRVGEGGAPSKLRQGVAALGEWAGEDWAKQEIASGFALL AALNLPNRPAAQDLPVVAEIWYRKLMEKKEIVSPEYDPIRIQTGFKVLQQSETWPQPAEL LRNLPPRLIPRAMLAKPASNKEKGRQKMAEVKDVLNKKGH >gi|257257193|gb|ACDX02000035.1| GENE 15 7815 - 8060 110 81 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261365960|ref|ZP_05978843.1| ## NR: gi|261365960|ref|ZP_05978843.1| putative head morphogeneis protein [Neisseria mucosa ATCC 25996] putative head morphogeneis protein [Neisseria mucosa ATCC 25996] # 1 81 1 81 81 148 100.0 1e-34 MGNVYFTSNNRISDLISQLEKLKAEHGDLVITRNYLRGGVRDIDLTEFKVAYIRPKEKRE RILAYRIGTHQVGDLKVLKIL >gi|257257193|gb|ACDX02000035.1| GENE 16 8078 - 8224 190 48 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261380844|ref|ZP_05985417.1| ## NR: gi|261380844|ref|ZP_05985417.1| conserved hypothetical protein [Neisseria subflava NJ9703] conserved hypothetical protein [Neisseria subflava NJ9703] # 1 48 1 48 48 76 93.0 6e-13 MIEPHEYRLLDEYLEQDWDAFISFAETKGFEVSEVYQLLNKLEEEANG >gi|257257193|gb|ACDX02000035.1| GENE 17 8217 - 8738 776 173 aa, chain + ## HITS:1 COG:NMA1291 KEGG:ns NR:ns ## COG: NMA1291 COG4396 # Protein_GI_number: 15794220 # Func_class: R General function prediction only # Function: Mu-like prophage host-nuclease inhibitor protein Gam # Organism: Neisseria meningitidis Z2491 # 1 172 1 172 172 240 80.0 9e-64 MAKQRIKQAAIEAAQDKTEVTAHIRTIGDLNREIKRLETEAGDKKAVIEQEYAALAAPLK AESERLTAAVAAYCEAHKDDLTENGKTKTVDFVTGLVKWRIRPPSVKVTGVAAVLAWMSE KTAYQSFIRTKQEIDKDAILNEREQFANGQVPGIKIVSGLEDFVIEPTEQELM >gi|257257193|gb|ACDX02000035.1| GENE 18 8817 - 9032 457 71 aa, chain - ## HITS:1 COG:no KEGG:NMA1292 NR:ns ## KEGG: NMA1292 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_A # Pathway: not_defined # 1 71 1 71 71 110 100.0 1e-23 MNTTYTLTFDQDSLKALNLLVFTLNHLKVLDMDMEGIEDGLSAVIETASEKADKLSAAFY NAVYEQEEKAA >gi|257257193|gb|ACDX02000035.1| GENE 19 9036 - 9644 912 202 aa, chain - ## HITS:1 COG:NMA1293 KEGG:ns NR:ns ## COG: NMA1293 COG3561 # Protein_GI_number: 15794222 # Func_class: K Transcription # Function: Phage anti-repressor protein # Organism: Neisseria meningitidis Z2491 # 1 202 1 202 202 340 85.0 1e-93 MKDYFTMNTTLIPTVSGSLDGQTQALVNARDLHQFLESKQHFADWIKNRINEYGFTQDVD FLGVHTVMSTEAGFFGQREKTVTDYHLSLDMAKELCMVERNDKGRQARRYFIEMEKQAKA LPDAVLYRIDALEDAYFQAAPEMLALLRYRSMGLNLTEIGKLLDMNPGAVSYRLKKLNDL GFLEYVPKPKMVAQQQSLGLEG >gi|257257193|gb|ACDX02000035.1| GENE 20 9755 - 9949 210 64 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261365965|ref|ZP_05978848.1| ## NR: gi|261365965|ref|ZP_05978848.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 64 1 64 64 85 100.0 2e-15 MVDEKLAEYRKKAEANRMTKRVSFNRETEKDILEIANNLDFSQWVKDQIRKEFKNQLDKD VATT >gi|257257193|gb|ACDX02000035.1| GENE 21 10493 - 10897 260 134 aa, chain + ## HITS:1 COG:NMB0985 KEGG:ns NR:ns ## COG: NMB0985 COG4382 # Protein_GI_number: 15676876 # Func_class: S Function unknown # Function: Mu-like prophage protein gp16 # Organism: Neisseria meningitidis MC58 # 1 134 22 158 165 154 60.0 4e-38 MRRALIAKIKIAQKELGLDDATYREVLERVTGKRSCTECSIPELERVVEDLRQHGFQPKK TAGQRPNRRDSADPMMRKIEALLLDNGWTWNYAHGTAKKMFKVDRVEWLSDGNMHKLVAA LQISANRKKKEKTG >gi|257257193|gb|ACDX02000035.1| GENE 22 10894 - 11373 413 159 aa, chain + ## HITS:1 COG:no KEGG:NMCC_1014 NR:ns ## KEGG: NMCC_1014 # Name: not_defined # Def: integral membrane protein # Organism: N.meningitidis_053442 # Pathway: not_defined # 1 159 1 159 159 275 94.0 5e-73 MSLNWEMTEQDFKDVEHLLPHSVVALITVIGLEAAFHMVKVWGGTNYPISNRRRNTRQSR ILHAQLVEDIGEEAAGRLERAYVGQPFLAIPRCWDAMRELRNRFIRRQYDAMSAEGLSDL FIVRELVLAHKLSTRNIRYILKEADREAAARAQADLFAA >gi|257257193|gb|ACDX02000035.1| GENE 23 11548 - 12054 301 168 aa, chain + ## HITS:1 COG:no KEGG:ACICU_02150 NR:ns ## KEGG: ACICU_02150 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 6 168 94 256 256 179 56.0 6e-44 MAQQKELPWIAEARKYIGLTEIPGKNHNPTILNWLHGLKAWWKDDETPWCGVFAAHCLRA GNRDIPKDWMRAKEYAFCGKRLTKPAYGCLVVFTRQGGGHVGFVVGKDKAGNLLVLGGNQ GNRVNIAAFPTSRVAAYVWPSVGGAPLDPAPERYNLPLGGAAMSRSEA Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:26:14 2011 Seq name: gi|257257191|gb|ACDX02000036.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont35.1, whole genome shotgun sequence Length of sequence - 12408 bp Number of predicted genes - 14, with homology - 14 Number of transcription units - 8, operones - 5 average op.length - 2.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 53 - 352 205 ## COG2801 Transposase and inactivated derivatives + Term 482 - 524 -0.8 - Term 472 - 510 -0.1 2 2 Tu 1 . - CDS 521 - 1423 736 ## COG2962 Predicted permeases - Prom 1518 - 1577 9.4 - Term 1533 - 1570 6.4 3 3 Tu 1 . - CDS 1693 - 2235 332 ## gi|261365971|ref|ZP_05978854.1| conserved hypothetical protein - Prom 2326 - 2385 4.2 - Term 2395 - 2443 8.7 4 4 Op 1 . - CDS 2461 - 2967 878 ## COG1854 LuxS protein involved in autoinducer AI2 synthesis 5 4 Op 2 . - CDS 3022 - 3345 536 ## COG1965 Protein implicated in iron transport, frataxin homolog - Prom 3372 - 3431 3.3 + Prom 3321 - 3380 2.3 6 5 Op 1 . + CDS 3416 - 3586 135 ## NMO_0186 putative lipoprotein 7 5 Op 2 . + CDS 3598 - 4818 1584 ## COG0019 Diaminopimelate decarboxylase 8 5 Op 3 . + CDS 4866 - 5405 753 ## COG1898 dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes + Term 5437 - 5487 14.1 9 6 Op 1 3/0.000 - CDS 5861 - 7426 2227 ## COG0659 Sulfate permease and related transporters (MFS superfamily) - Term 7475 - 7535 3.4 10 6 Op 2 . - CDS 7546 - 8220 988 ## COG0288 Carbonic anhydrase - Prom 8414 - 8473 4.5 + Prom 8518 - 8577 6.7 11 7 Op 1 . + CDS 8599 - 9840 2013 ## COG0814 Amino acid permeases + Term 9865 - 9916 -0.3 + Prom 9923 - 9982 4.4 12 7 Op 2 . + CDS 10081 - 11583 2270 ## COG0280 Phosphotransacetylase + Term 11610 - 11661 14.2 + Prom 11661 - 11720 3.8 13 8 Op 1 5/0.000 + CDS 11741 - 12109 475 ## COG3039 Transposase and inactivated derivatives, IS5 family 14 8 Op 2 . + CDS 12052 - 12406 422 ## COG3039 Transposase and inactivated derivatives, IS5 family Predicted protein(s) >gi|257257191|gb|ACDX02000036.1| GENE 1 53 - 352 205 99 aa, chain + ## HITS:1 COG:RSc2265 KEGG:ns NR:ns ## COG: RSc2265 COG2801 # Protein_GI_number: 17546984 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Ralstonia solanacearum # 1 94 172 265 269 104 57.0 4e-23 MLHSDQGVLYRTAGYRELLAQHSMVQSMSRKANCWDNAPMESFFAVLKTECFYRAGELTV DELMKQIDDYMDYYNRERCSLKLKKLSPVAYRTQLTQSA >gi|257257191|gb|ACDX02000036.1| GENE 2 521 - 1423 736 300 aa, chain - ## HITS:1 COG:HI0223 KEGG:ns NR:ns ## COG: HI0223 COG2962 # Protein_GI_number: 16272186 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Haemophilus influenzae # 1 293 5 298 300 199 39.0 5e-51 MTDLSKGLIAAALSNILFVVLFLYGIWMKPMTGTEVFAWRMVAMLAALFVLMGMVGGWQA ADRFIRGVGRDWKRWLLIFLPTPVFASQLWLFVWSPVNGEGVNVAMGYFLFPLAMMLCGW IWFKERLNRLQTAAVMLACAGVAWEWLRMGAFSWATVWVFGTYPVYYLLRRRLGVPPLVG LTLDLMVIAPCALVYIVFFTDTLGLIADMPVLAGFVVLLGINSAVAMHLNLKANQLLPVA VFGMMSYLEPVLLFAVSVTFLGEPLQPGALISYGLIWSGLCLMMANGWVKARQKAVDIVD >gi|257257191|gb|ACDX02000036.1| GENE 3 1693 - 2235 332 180 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261365971|ref|ZP_05978854.1| ## NR: gi|261365971|ref|ZP_05978854.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 180 1 180 180 321 100.0 2e-86 MVNQSDYVNHLKKRMYYSIEQRFYLESISCSYAIVENRTKRIVEHLGKSASGMRLDKKME YIYESIKNKQNKSDPKMKKLIGYLKYRISPELMQIDPLKDYNNWKMGLNHSANSNSGNKL YHFKQLRNELTHELATYDSGNPALINFDSYSDLAELGKEVADGLLKIAIGMKAKKRRLNL >gi|257257191|gb|ACDX02000036.1| GENE 4 2461 - 2967 878 168 aa, chain - ## HITS:1 COG:NMA0463 KEGG:ns NR:ns ## COG: NMA0463 COG1854 # Protein_GI_number: 15793465 # Func_class: T Signal transduction mechanisms # Function: LuxS protein involved in autoinducer AI2 synthesis # Organism: Neisseria meningitidis Z2491 # 1 168 1 168 168 333 95.0 8e-92 MPLLDSFKVDHTRMHAPAVRVAKTMTTPKGDTITVFDLRFCVPNKEILSEKGIHTLEHLF AGFMRDHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQQVADAWLASMQDVVNVKDQSKI PELNEYQCGTYLMHSLAEAQEIAQNVLTRKVAVNKNEELTLDESLLNA >gi|257257191|gb|ACDX02000036.1| GENE 5 3022 - 3345 536 107 aa, chain - ## HITS:1 COG:NMA0466 KEGG:ns NR:ns ## COG: NMA0466 COG1965 # Protein_GI_number: 15793468 # Func_class: P Inorganic ion transport and metabolism # Function: Protein implicated in iron transport, frataxin homolog # Organism: Neisseria meningitidis Z2491 # 1 107 1 107 107 197 96.0 5e-51 MMTESEFIRMSEELFEHIEDQIDENGWDFDCQFAGNVLTIEAADGTQIIVNRHTPNQELW IAAKSGGYHFAEQNGKWLATRDSRDFYDVLNEALSAASGEAVKIAEL >gi|257257191|gb|ACDX02000036.1| GENE 6 3416 - 3586 135 56 aa, chain + ## HITS:1 COG:no KEGG:NMO_0186 NR:ns ## KEGG: NMO_0186 # Name: not_defined # Def: putative lipoprotein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 1 54 8 61 63 72 83.0 5e-12 MKYGVFFAAATALLLSACGYKGDLYLPKEGDKARFGVIQTGLKVHSSKEPTNQTND >gi|257257191|gb|ACDX02000036.1| GENE 7 3598 - 4818 1584 406 aa, chain + ## HITS:1 COG:NMA0468 KEGG:ns NR:ns ## COG: NMA0468 COG0019 # Protein_GI_number: 15793470 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate decarboxylase # Organism: Neisseria meningitidis Z2491 # 1 406 1 406 406 764 94.0 0 MTLHCEQVPYSRLAEEFGTPLYVYSQSALTEAFENYQTAFAALSPLVCYAVKANGNLSII KHFASLGSGFDIVSGGELARVLAAGGDAAKTIFSGVGKSEAEIEFALHAGVKCFNMESIP EIDRIQKVAERLGKTASVSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAARQ SHLKIIGIDCHIGSQLTDLSPLIEACERILILVDQLADEGIVLEHLDLGGGVGIVYQDET VPDLGAYAQAVQKLIGTRRLKLILEPGRSLVGNAGSLLTRVEFVKHGEEKNFVMVDAAMN DLMRPALYDAYHHIEAVEPKNIPPLTANIVGPICETGDFLGKDRTIACEEGDLLVIRSAG AYGASMASNYNTRNRAAEVLVDGSEYRLIRRRETLEQQMANEMACL >gi|257257191|gb|ACDX02000036.1| GENE 8 4866 - 5405 753 179 aa, chain + ## HITS:1 COG:NMB0081 KEGG:ns NR:ns ## COG: NMB0081 COG1898 # Protein_GI_number: 15676014 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes # Organism: Neisseria meningitidis MC58 # 1 179 6 184 184 359 94.0 1e-99 MKIIDTTLPDVKLLEPQVFGDARGFFMETFRDEWFKANVCDRTFVQENHSKSGKGVLRGL HYQTENTQGKLVRVVVGEVFDVAVDMRKDSPTFGKWAGEILSAENKRQLWVPEGFAHGFY VLSDEAEFVYKCTDYYNPKAEHSLIWNDPTVGIEWPLQGEPNLSPKDLAGKILAEAVTF >gi|257257191|gb|ACDX02000036.1| GENE 9 5861 - 7426 2227 521 aa, chain - ## HITS:1 COG:RSp0113 KEGG:ns NR:ns ## COG: RSp0113 COG0659 # Protein_GI_number: 17548334 # Func_class: P Inorganic ion transport and metabolism # Function: Sulfate permease and related transporters (MFS superfamily) # Organism: Ralstonia solanacearum # 12 481 8 480 520 316 41.0 9e-86 MKSHQKKQALGSLFKSNFASGLVVFLVALPLCLGIALASGAPPLSGVLAGIVGGIVIGSL STSHISVSGPAAGLAAIILATITELGSFELFLCAGLIAGAIQLLLGFIRAGSLAEYIPVS VIEGMLAGIGVIIIMKQIPFALGSSGSLAAPAALFADIHTGSLLVAGVSMAILIVWDKVP ALKNIKTLPAALVAVGAGILMNQWFVASGSSLAILAGQLVQLPVPDTWREAAAMLTLPNF SGFGNSYVWMTGITIAIVASIETLLCIEAADRLDTRRRITDTNRELRAQGAGNIVSSLIG GLPITSVVVRSSANANAGATHKLSAVIHGVLLLVCVLAIPFILNMIPLSTLAAVLLLVGY KLAKPATFLHFWHKGLYQFIPFAATLIAVVALDLLKGVGIGLAISIIFILQGNMKRAYYL SREELAEADEISLELAEEVSFLNKAAIKKTLKNIRPGSKVTINAERSSYIAGDVLELIED FANVFAKENDIDVVLKGFKSDYDHEGRDHHSHVRVGHSASI >gi|257257191|gb|ACDX02000036.1| GENE 10 7546 - 8220 988 224 aa, chain - ## HITS:1 COG:PA4676 KEGG:ns NR:ns ## COG: PA4676 COG0288 # Protein_GI_number: 15599871 # Func_class: P Inorganic ion transport and metabolism # Function: Carbonic anhydrase # Organism: Pseudomonas aeruginosa # 8 195 7 194 215 183 46.0 2e-46 MSQSYEVIFENNRKWQETKRQQCPDYFKDLADGQNPEYLYIGCSDSRVAAEELMGFEPGD VFVHRNVANLVHGLDMNAASAIEYAVSHLKVKHIIICGHYNCGGIKAAMLPEDLGAMNPW LRNIRDVYRLHQEELDAIEDEHLRYDRLVELNVQEQCLNVIKMACVQERYLLDEYPIVHG WVFDLRTGGLIDLNIDFKNILADIQKIYDLTDSEWVVNARKKAG >gi|257257191|gb|ACDX02000036.1| GENE 11 8599 - 9840 2013 413 aa, chain + ## HITS:1 COG:NMA0409 KEGG:ns NR:ns ## COG: NMA0409 COG0814 # Protein_GI_number: 15793414 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Neisseria meningitidis Z2491 # 1 413 1 413 413 682 93.0 0 MSVKTPSLFGGAMIIAGTVIGAGMLANPTATSGVWFTGSLIVLLYTWFSMLSSGLMILEV NTHYPHGASFDTMVKDLLGPIWNAINGIAVAFVLYLLTYAYIFVGGDLTAKGLGSAVGSD VSLTVGQLVFFGILAFCVWASARLVDRFTSVLIGGMVLTFIWATGGLIADAKLPILFDTQ APAGTSYWIYVATALPVCLASFGFHGNVSSLLKYFKGDAPKVAKSIWAGTLIALVIYVLW QIAIQGNLPRSEFAPVIAAEGQVSVLIETLSKFAQTGSMDKVLTLFSYMAIATSFLGVTL GLFDYIADIFKWNDSVSGRTKTAALTFLPPLISCLLFPTGFVTAIGYVGLAATIWTGIIP AMLLYRSRQKFGAGKNYKIYGGFGLMVWVFLFGVVNIAAQVLSQLELVPVFKG >gi|257257191|gb|ACDX02000036.1| GENE 12 10081 - 11583 2270 500 aa, chain + ## HITS:1 COG:NMB0631_2 KEGG:ns NR:ns ## COG: NMB0631_2 COG0280 # Protein_GI_number: 15676533 # Func_class: C Energy production and conversion # Function: Phosphotransacetylase # Organism: Neisseria meningitidis MC58 # 177 500 1 324 324 561 92.0 1e-159 MAKLLVVPVSAGLDATAASKAFAAALGAQVFQPLDASAETLLAQGKSDDWFDAVVGKAVA LNTDKLVIEGIAPEADKLFLSGKNVELALSLDAGVVLALQSDSADAAEAAHRINLAKQLY TNAPGLLEGFIIEGAAASVGEEVARLTGLTFYGSSSALKDVSALAKREASRLSPAQFRYN LIDFARKADMRIVLPEGAEPRTVAAAAICHEKGIARCVLLAKREEVEAVAKERGISLPDS LEIVDPAALVEQYVEPMCELRKSKGLTPEDARKQLQDTVVLGTMMMAQNDVDGLVSGAVH TTANTIRPALQLIKTAPGASLVSSVFFMLLPNQVLVFGDCAVNPNPTPEQLADIAIQSAD TAKAFGIPPKVAMISYSTINSGSGPDVDAVIEATKLAKEKRPNLEIDGPLQYDAATVPEI GKTKAPESTVAGQATVLIFPNLNTGNCTYKAVQRSANVLSVGPLLQGLRKPVNDLSRGAL VEDIVFTIALTAVQAKQMAG >gi|257257191|gb|ACDX02000036.1| GENE 13 11741 - 12109 475 122 aa, chain + ## HITS:1 COG:NMA1619 KEGG:ns NR:ns ## COG: NMA1619 COG3039 # Protein_GI_number: 15794513 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS5 family # Organism: Neisseria meningitidis Z2491 # 1 122 1 122 122 236 99.0 6e-63 MSTFFRQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQRTRYLRDHRGRPAYPLLSM FKAVLLGQWHSLSDPELEHSLITRIDFNLFCRFDELSIPDYSTLCRYRNRRRKTTPCPNC WN >gi|257257191|gb|ACDX02000036.1| GENE 14 12052 - 12406 422 118 aa, chain + ## HITS:1 COG:NMA1738 KEGG:ns NR:ns ## COG: NMA1738 COG3039 # Protein_GI_number: 15794631 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS5 family # Organism: Neisseria meningitidis Z2491 # 8 118 101 211 283 206 93.0 1e-53 MPLPQPAAQDDTLSELLELINHQLTEKGLKVEKASAAVIDATIIQTAGSKQRQAIEVDEE GQVRGQTTPSKDSDARWTKKNGLYKLGYKQHTRTDEEGYIEKLHITPANTHECNHLSP Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:26:29 2011 Seq name: gi|257257189|gb|ACDX02000037.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont36.1, whole genome shotgun sequence Length of sequence - 11138 bp Number of predicted genes - 13, with homology - 13 Number of transcription units - 8, operones - 4 average op.length - 2.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 38 - 97 1.6 1 1 Tu 1 . + CDS 182 - 1219 701 ## COG2801 Transposase and inactivated derivatives - Term 1162 - 1202 7.3 2 2 Tu 1 . - CDS 1257 - 1538 500 ## gi|261365985|ref|ZP_05978868.1| protein TonB - Prom 1563 - 1622 3.4 3 3 Op 1 3/0.000 - CDS 1677 - 2345 1082 ## COG0560 Phosphoserine phosphatase 4 3 Op 2 . - CDS 2342 - 3010 1036 ## COG0593 ATPase involved in DNA replication initiation - Prom 3037 - 3096 3.3 + Prom 3109 - 3168 2.0 5 4 Tu 1 . + CDS 3189 - 3827 758 ## COG0586 Uncharacterized membrane-associated protein + Term 3851 - 3891 10.8 - Term 3837 - 3879 11.2 6 5 Op 1 . - CDS 3901 - 4491 537 ## VCM66_A0409 hypothetical protein - Prom 4527 - 4586 5.6 7 5 Op 2 . - CDS 4600 - 5412 924 ## NGK_2004 hypothetical protein - Prom 5482 - 5541 5.7 + Prom 5431 - 5490 5.6 8 6 Op 1 . + CDS 5516 - 5767 538 ## NGK_2005 hypothetical protein 9 6 Op 2 . + CDS 5841 - 6671 1335 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Term 6698 - 6755 17.8 + Prom 6798 - 6857 3.4 10 7 Tu 1 . + CDS 6907 - 7449 327 ## Daci_4647 molybdenum ABC transporter ATP-binding protein + Prom 7546 - 7605 9.7 11 8 Op 1 12/0.000 + CDS 7815 - 9374 1956 ## COG1140 Nitrate reductase beta subunit 12 8 Op 2 12/0.000 + CDS 9374 - 10042 904 ## COG2180 Nitrate reductase delta subunit 13 8 Op 3 . + CDS 10045 - 10728 670 ## COG2181 Nitrate reductase gamma subunit + Term 10747 - 10790 12.1 Predicted protein(s) >gi|257257189|gb|ACDX02000037.1| GENE 1 182 - 1219 701 345 aa, chain + ## HITS:1 COG:RSc1436 KEGG:ns NR:ns ## COG: RSc1436 COG2801 # Protein_GI_number: 17546155 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Ralstonia solanacearum # 76 340 1 274 278 213 48.0 3e-55 MDTRLSRRRHRRTRTSPIQNHDRPPQKPLHRRQTRPRKNTGRAYRRVVLYARKGCLPKGV KSPQPKADRKGQSQTVQTLRAQHPLKYLLHIANLPKSSFYYHHQDRPDPDAADKALIAEI YERHKGRYGQRRIAAALDWNRKKVARLMKQMELKALIRAKKAYRHPAMGEISEHLLKRRF EARKPNEKWLTDVTELKGKDGKLYLSPILDLFNREIIAYAMSRNANSEMVKEMLEKAAPR LTDKGTMLHSDQGVLYRTAGYRELLAQHSMVQSMSRKANCWDNAPMESFFAVLKTECFYR AGELTVDELMKQIDDYMDYYNRERCSLKLKKLSPVAYRTQLAQSA >gi|257257189|gb|ACDX02000037.1| GENE 2 1257 - 1538 500 93 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261365985|ref|ZP_05978868.1| ## NR: gi|261365985|ref|ZP_05978868.1| protein TonB [Neisseria mucosa ATCC 25996] protein TonB [Neisseria mucosa ATCC 25996] # 1 93 1 93 93 145 100.0 1e-33 MSIRAIIPALLLTFTLPAAAQTVNPAEYAPASANPAQPIKPVKLSILVSPEGKAVEVSIL ESSGYEGLDETAMAAAKKDKYDAAGYWVKYKGT >gi|257257189|gb|ACDX02000037.1| GENE 3 1677 - 2345 1082 222 aa, chain - ## HITS:1 COG:NMB1075 KEGG:ns NR:ns ## COG: NMB1075 COG0560 # Protein_GI_number: 15676959 # Func_class: E Amino acid transport and metabolism # Function: Phosphoserine phosphatase # Organism: Neisseria meningitidis MC58 # 1 222 1 222 222 446 94.0 1e-125 MKNLAIFDLDNTLINTDSDHSWPQYLIKKGLVDAAETEAQNEKFYRDYQNGCLDIDAFLK FHLAPLARYSKEELAEFHREFMAQFITPHISPMQRMLVQSHQMAGDETLVISSTNEFIIT PICHLFGITNIIGTQLETGADGRYTGNYIGTPSLKEGKITRLNQWLAERGETLESYGKTY FYSDSKNDLPLLRLVNEPVAVNPDAELEQQAKAKGWPILNFK >gi|257257189|gb|ACDX02000037.1| GENE 4 2342 - 3010 1036 222 aa, chain - ## HITS:1 COG:NMA1279 KEGG:ns NR:ns ## COG: NMA1279 COG0593 # Protein_GI_number: 15794209 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication initiation # Organism: Neisseria meningitidis Z2491 # 1 222 22 243 243 394 87.0 1e-110 MNQLIFDFAERGYPGFDKFLGTENAELVYVLQHKHDPFIYVWGEEGAGKSHLLRAWVAQA LDAGKKAVYIDASATPLTEAAFEAEYLAIDQIEKLGNEEQALLFAVFNRFRNSGKGFLLL SSEHTPQQLVIREDLRTRMAYCLVYEVKPLTDQEKIDALVSMAAARQVTIDPEIFEYLLN HWRRDMDSLMQMLDTLDNYAVTMGKRITLPLLRQLLKQQETQ >gi|257257189|gb|ACDX02000037.1| GENE 5 3189 - 3827 758 212 aa, chain + ## HITS:1 COG:NMA1250 KEGG:ns NR:ns ## COG: NMA1250 COG0586 # Protein_GI_number: 15794185 # Func_class: S Function unknown # Function: Uncharacterized membrane-associated protein # Organism: Neisseria meningitidis Z2491 # 1 211 1 211 214 295 76.0 4e-80 MISTLIDFILHIDQHLVEISAQYGVWIYAVLFLIIFCETGLVVTPFLPGDSLLFAAGGIA AVGSMNIHIMIALLLAAAILGDAANFMIGKFFGRKLFANPDSKIFRQSYLEKTHAFYEKH GGKTIIIARFVPIVRTFAPFVAGMGSMHYGTFIRYNIIGAVLWVLSFSYAGYFFANIPVV KNNLALVMVAIIVISILPGVVEVIRARRAAKK >gi|257257189|gb|ACDX02000037.1| GENE 6 3901 - 4491 537 196 aa, chain - ## HITS:1 COG:no KEGG:VCM66_A0409 NR:ns ## KEGG: VCM66_A0409 # Name: not_defined # Def: hypothetical protein # Organism: V.cholerae_M66-2 # Pathway: not_defined # 83 196 28 141 141 159 64.0 8e-38 MPDEPSGIFLGVDFMNKNKWIWILIVAAVVVGYQKMQQGRQGQAADAVPTQTQPQTQAEK RQSEQSESKKSQPKQPKSDRQAGQGSAEQILQQAFENQQSDIQVKGAGTVLKTLPDDNQG TRHQRFILKLSSGQTLLVAHNIDLAEKIKGLKKGDKVGFYGEYEWSEQGGVLHWTHHDPA GRHTDGWLEHDGRVYQ >gi|257257189|gb|ACDX02000037.1| GENE 7 4600 - 5412 924 270 aa, chain - ## HITS:1 COG:no KEGG:NGK_2004 NR:ns ## KEGG: NGK_2004 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 1 265 1 256 256 222 51.0 1e-56 MDTNRPDTPQQTDESLDWESRLEKLRQTRQLNAPYTHAPLVRESREPAFEQKPKAKSVKL DDANRDAVLTEYLRKWQEEHNAMLEEEAAETAETDAMVILQENWLNAQSSLQMSASDRQI ESTRTVWLNPKRKTVEFDAPAKEAPTSSENENPQAQEQVSDDPKDETPPITVHINVLNPQ VINRREVFCISEQDLSERLIKRLRPHVADAVNGMIRTAVQKQMALFTYQLQQTLSEQAPD LVEQLLDYNVKKVLNDIKYEMKYSQGNKKA >gi|257257189|gb|ACDX02000037.1| GENE 8 5516 - 5767 538 83 aa, chain + ## HITS:1 COG:no KEGG:NGK_2005 NR:ns ## KEGG: NGK_2005 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 1 82 1 82 83 122 86.0 4e-27 MSSIEQRLEYLEEANDVLRMQNHVLATALKGLIRSLPSDMANEAVESIQLAFEDALAELN YEDSPHTDLFHDVTYAFFREKDH >gi|257257189|gb|ACDX02000037.1| GENE 9 5841 - 6671 1335 276 aa, chain + ## HITS:1 COG:NMA1811 KEGG:ns NR:ns ## COG: NMA1811 COG0834 # Protein_GI_number: 15794701 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Neisseria meningitidis Z2491 # 1 267 1 267 268 410 85.0 1e-114 MNMKKWIAAALACSALALSACGGQSKDASSSAPKADKVYRVAANAEFAPFESLDSAGNVE GFDVDLMNAMAKAGGFKVEFKHQPWDSLFPALKNGDTDIVISGVTITDERKQSMDFTDPY FEITQVVLVPKGKKVASSDDLKNMAKVGVVTGQTGDFSVSKLLGNDNPKIARFESVPLVI KELENGGVDAVVSDSAVIANYVKNNPTKSMDFITLPDFTIENYGIAARKGDEATIKMLNE ALKKVRDSGEYDKIHAKYFAKEGDKAAAASQPEAAK >gi|257257189|gb|ACDX02000037.1| GENE 10 6907 - 7449 327 180 aa, chain + ## HITS:1 COG:no KEGG:Daci_4647 NR:ns ## KEGG: Daci_4647 # Name: not_defined # Def: molybdenum ABC transporter ATP-binding protein # Organism: D.acidovorans # Pathway: not_defined # 13 177 9 174 182 108 37.0 1e-22 MSNQIEQQSEYAIAAVVYADEGNAAITALWQAVRRLQQDGWRVAGLLNPIDNEGKHSNSE LASVADNRRFSIFQNLGNHSSGCKLDAGALAAAGSVIREAIAEGTDLVVINKFGHAEIDN RGLLSEYLAAISSGIPVLTTLQSKYLPDWRSFSGEAGGELPADTDTVLDWIKQSVKRTLP >gi|257257189|gb|ACDX02000037.1| GENE 11 7815 - 9374 1956 519 aa, chain + ## HITS:1 COG:RSp0975 KEGG:ns NR:ns ## COG: RSp0975 COG1140 # Protein_GI_number: 17549196 # Func_class: C Energy production and conversion # Function: Nitrate reductase beta subunit # Organism: Ralstonia solanacearum # 1 499 1 499 515 870 77.0 0 MKIRAQVGMVLNLDKCIGCHTCSVTCKNVWTSRDGVEYAWFNNVETKPGIGFPKNWEDQN KWNGGWVRKPNGKLVPKQGGKLKILANIFANPNMPQIDDYYEPFTYDYEHLQNAPKMKTP PTARPISVLTGKKMDKVEWGPNWEDDLAGEFEKRAKDTLFEGIQKEMMGAFEQTFMMYLP RLCEHCLNPTCVASCPSGSIYKREDDGIVLIDQDKCRGWRMCVSGCPYKKIYYNWTSGKA EKCTFCYPRIEGGQPTVCSETCVGRIRYLGVLLYDADKIEQAASVENPQDLYEQQLGVFL NPHDPEVQREALKQGISQSWLDAAQKSPVYKMAMEWKVAFPLHPEYRTLPMVWYIPPLSP IQSAIENGLVGENGIIPSVDEMRIPLRYLANLLTAGKIEPIKEALERMIAMRRFKRGQVV HGETPAQALEGTGLTPEMVEDMYQIMAIANYEDRFVIPTSHKEMVENSFGDKASCGFTFG NGCSGGSSEESLFGKRKGTPIIFHGLRKDAEKNREEGVR >gi|257257189|gb|ACDX02000037.1| GENE 12 9374 - 10042 904 222 aa, chain + ## HITS:1 COG:RSp0976 KEGG:ns NR:ns ## COG: RSp0976 COG2180 # Protein_GI_number: 17549197 # Func_class: C Energy production and conversion # Function: Nitrate reductase delta subunit # Organism: Ralstonia solanacearum # 1 217 1 221 226 193 49.0 2e-49 MSVNPVYKWFSALLCYPEAELIEFLPEFQTALKEWPELQSQAGRLKSFLDYLVSHNLREL QENYVATFDRNRDHALYIFEHVYGEDRDRGSAMVDLLQEYRNHGFELGDDELPDYLPALL EYLSQVPSEHAQKLLGDAVHVIAHIGGKLEKNGSPYAVLLQGITALSPVAPQPLIEPPVR DMDEAMETFGPDISGTEPLLKPSVETVQFYPKAAFQADSKGV >gi|257257189|gb|ACDX02000037.1| GENE 13 10045 - 10728 670 227 aa, chain + ## HITS:1 COG:RSp0977 KEGG:ns NR:ns ## COG: RSp0977 COG2181 # Protein_GI_number: 17549198 # Func_class: C Energy production and conversion # Function: Nitrate reductase gamma subunit # Organism: Ralstonia solanacearum # 1 227 1 227 227 241 61.0 7e-64 MNTLHQFFFGIFPYIALAIFFFGSLVRFEREQYSWKSESSQLLYEGQLRLGNILFHVGII AVFFGHLFGLLTPLWFWDAIGVSHGAKQIFAMVMGGIFGTTAMIGLIILLQRRLKCDRLA ANTTWRDKLVLIWLIVTLGLGLLTIFVSMGHTDGHEMVKLMNWAQHIVTFRGEAANYIKD VNFLFKLHMVMGMGLFVIFPFTRLVHVWSGFASVAYLGRAWQLVRRR Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:26:53 2011 Seq name: gi|257257186|gb|ACDX02000038.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont37.1, whole genome shotgun sequence Length of sequence - 10496 bp Number of predicted genes - 9, with homology - 9 Number of transcription units - 5, operones - 2 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 25 - 67 7.6 1 1 Op 1 2/1.000 - CDS 89 - 1102 1703 ## COG0059 Ketol-acid reductoisomerase 2 1 Op 2 2/1.000 - CDS 1176 - 1469 476 ## COG1359 Uncharacterized conserved protein 3 1 Op 3 32/0.000 - CDS 1534 - 2025 878 ## COG0440 Acetolactate synthase, small (regulatory) subunit 4 1 Op 4 1/1.000 - CDS 2037 - 3764 2511 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] - Term 4124 - 4181 17.1 5 2 Tu 1 . - CDS 4196 - 5338 1441 ## COG0687 Spermidine/putrescine-binding periplasmic protein - Prom 5413 - 5472 4.2 + Prom 5549 - 5608 5.7 6 3 Tu 1 . + CDS 5641 - 5904 415 ## PROTEIN SUPPORTED gi|15676374|ref|NP_273510.1| 30S ribosomal protein S20 + Term 5961 - 6010 3.5 + Prom 5971 - 6030 4.3 7 4 Tu 1 . + CDS 6166 - 7365 1584 ## COG2829 Outer membrane phospholipase A + Term 7464 - 7513 6.8 + Prom 7432 - 7491 5.1 8 5 Op 1 3/0.000 + CDS 7523 - 8224 805 ## COG2928 Uncharacterized conserved protein 9 5 Op 2 . + CDS 8288 - 10096 2571 ## COG0173 Aspartyl-tRNA synthetase + Term 10134 - 10182 13.1 Predicted protein(s) >gi|257257186|gb|ACDX02000038.1| GENE 1 89 - 1102 1703 337 aa, chain - ## HITS:1 COG:NMB1574 KEGG:ns NR:ns ## COG: NMB1574 COG0059 # Protein_GI_number: 15677424 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Ketol-acid reductoisomerase # Organism: Neisseria meningitidis MC58 # 1 337 1 337 337 563 88.0 1e-160 MQVYYDKDADLSLIKGKTVAIIGYGSQGHAHAANLKDSGVNVVVGLRQGGSWKKAEAAGF EVLSVADATKKADVVMILLPDENQPVVYKNEVEPNLKQGAALAFAHGFNVHYNQIVPRDD LDVIMVAPKGPGHTVRSEFLKGGGVPSLIAVYQDKSGKARDIALSYAAANGGTKGGVIET NFREETETDLFGEQAVLCGGVVELIKTGFETLTEAGYAPEMAYFECLHEMKLIVDLIYEG GIANMNYSISNNAEYGEYVTGVEVINDKSREAMRNALKRIQTGEYAKMFIQEGAVNYASM TARRRLTADHQIEKVGAQLRSMMPWIAKNKLVDLDKN >gi|257257186|gb|ACDX02000038.1| GENE 2 1176 - 1469 476 97 aa, chain - ## HITS:1 COG:NMB1575 KEGG:ns NR:ns ## COG: NMB1575 COG1359 # Protein_GI_number: 15677425 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis MC58 # 1 96 1 96 97 147 82.0 4e-36 MSNIKIVALVTVKPEHTETLKPLFQSLVKASRAEEGNISYDLHQEIGKPERFVFVENWKS QAAIDAHNASEHFQGFVKAIDGKTDALEIVLMEELSV >gi|257257186|gb|ACDX02000038.1| GENE 3 1534 - 2025 878 163 aa, chain - ## HITS:1 COG:NMA1765 KEGG:ns NR:ns ## COG: NMA1765 COG0440 # Protein_GI_number: 15794658 # Func_class: E Amino acid transport and metabolism # Function: Acetolactate synthase, small (regulatory) subunit # Organism: Neisseria meningitidis Z2491 # 1 163 1 163 163 270 98.0 7e-73 MRHILSVLMENESGAMSRVVGLFSARDYNIDSLAVAPTEDKTLSRMTIVTHGDEQVIEQI TKQLNKLIEVIKVVDLNESRFVERELMLVKVRAVGKDRDEFLRLTEIYRGSIIDVTDRSY TIEITGSTDKLDSFLETVGRAQILETVRTGAAGIGRGERILKI >gi|257257186|gb|ACDX02000038.1| GENE 4 2037 - 3764 2511 575 aa, chain - ## HITS:1 COG:NMB1577 KEGG:ns NR:ns ## COG: NMB1577 COG0028 # Protein_GI_number: 15677427 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Neisseria meningitidis MC58 # 1 575 1 575 575 1072 92.0 0 MQLSGAQIIVQSLKAEGVEYVFGYPGGAVIEIYDAIFQLNKFKHILARHEQAAVHAADAY SRVSGKVGVALVTSGPGVTNALTGIATAYSDSIPMVVISGQVGNSLIGTDAFQEVDTVGI TRPCVKHNFLVTNVNELAETIKKAFQIAASGRPGPVVVDVPKDVTQAMAKFSYPQEDIFI RSYQPVVQGHIGQIKKAIQMLASAKRPIVYFGGGAILGNASEELTKFVRMIGAPCTGTLM GLGAYPSSDRQFLGMLGMHGTYEANLAMQNADVVLAVGARFDDRVVSVPSKFFEKAKKVI HIDVDPSSIAKRVKVDIPIVGDVKNVLTEMIGLWSKQDTTPASDSLDKWWKSIEEWRSRD CLWFDNDSEIIKPQYVVQKLAEITNNSAIITSDVGQHQMFAAQYYPFERPRQWLNSGGLG TMGVGLPYAMGAKLAAPDQDVFCITGEGSIQMNIQELSTCFQYRIPVNVVTLNNGYLGMV RQWQELYYGNRESETYFDSLPDFVKLAEAYGHIGIRVDKKSDVEGALLEAVKQKDRLVFM DFLTDKKQNVLPMVGNGKGLDEMVLPPHMRENPKA >gi|257257186|gb|ACDX02000038.1| GENE 5 4196 - 5338 1441 380 aa, chain - ## HITS:1 COG:NMB0462 KEGG:ns NR:ns ## COG: NMB0462 COG0687 # Protein_GI_number: 15676373 # Func_class: E Amino acid transport and metabolism # Function: Spermidine/putrescine-binding periplasmic protein # Organism: Neisseria meningitidis MC58 # 1 380 80 459 459 669 94.0 0 MKKSVLAVLAALSLAACGGGEKKTEQPQAGSAPAANAEAAATDTLNIYNWSNYVDESTVE DFKKANNLKLTYDLYENNETLEAKMLTGKSGYDLVVPGIAFLPRQIEAGAYQKVNKDLIP NYKNIDPELLKMLETADPGNQYAVPYFSGVNTLAITAKGKELLGGKLPENGWDLLFKPEY TNKLKSCGIALWDTPSEMFPILLNYLGKDPKGTNPDDLKAAAEVLKTIRPDVKRFSPSII DELARGDICLAAGNGGDLNLAKARSEEVKNNVGIEVLTPKGMGFWIESWLIPADAKNIAN AHKYINYTLDPEVAAKNGIAVTFAPASKPAREKMPAELVNTRSIFPTAEDMKNGFVMPQM SSDAKKLSVNLWQKIKVGSN >gi|257257186|gb|ACDX02000038.1| GENE 6 5641 - 5904 415 87 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15676374|ref|NP_273510.1| 30S ribosomal protein S20 [Neisseria meningitidis MC58] # 1 87 1 87 87 164 100 3e-40 MANSAQARKRARQSVKQRAHNASLRTAFRTAVKKVLKAVEAGDKAAAQAVYQESVKVIDR IADKGVFHKNKAARHKSRLSAKVKALA >gi|257257186|gb|ACDX02000038.1| GENE 7 6166 - 7365 1584 399 aa, chain + ## HITS:1 COG:NMA2021 KEGG:ns NR:ns ## COG: NMA2021 COG2829 # Protein_GI_number: 15794901 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane phospholipase A # Organism: Neisseria meningitidis Z2491 # 12 399 24 409 409 581 71.0 1e-166 MLKHNLAQSDAIKNKKPSLAKCRRALMLILIGGAAAPVAYADTALQCTSIQDNATRLACY DSIYSAQLPPQAPLPVIREETTKAPVDLPKTISTSREKKAATIVFDENKEQSTLSEDNLR TTADAYTPLSLMYDLDKNDSRGLLSVREHNPMYLMPAWYNSSPNLHPHSPSRGTTNQEKF SEQKHIETKLQVSFKSKIAEDLFKTRADLWFGYTQKSDWQIYNQGRKSAPFRNTDYEPEI FLTQPVKADLPFGGKLRMVGAGFVHQSNGQSRPESRSWNRVYALAGMEWGKLTVIPRVWM RAFDQTGENNDNPDITDYMGHGDLKLQYRLNDKQNISSLLRYNPKTGHGAVEAAYTFPIK GKLKGVVRGFHGYGESLIDYNYKQNGIGIGLMFNDWDGI >gi|257257186|gb|ACDX02000038.1| GENE 8 7523 - 8224 805 233 aa, chain + ## HITS:1 COG:NMB0465 KEGG:ns NR:ns ## COG: NMB0465 COG2928 # Protein_GI_number: 15676376 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis MC58 # 1 228 1 228 233 335 81.0 6e-92 MTEQTAEGGKVAKALKKYLITGMLVWLPIAVTIWAVSYIISAADRLISLLPEQWQPQYFW GFNIPGLGIIAAIVVLFLTGVFAANVLGRQILAAWDSLLGRIPVVKSIYSSVKKVSESLL SDSSRSFRTPVLVPFPQPNIWTIAFVSGHIPDKLKGSLPHDDDYLSVYVPTTPNPTGGYY IMVKKSDVRELDMSVDEALKYVISLGMVMPDEVRVKVLAEYRSSENGDTEQNN >gi|257257186|gb|ACDX02000038.1| GENE 9 8288 - 10096 2571 602 aa, chain + ## HITS:1 COG:NMA2019 KEGG:ns NR:ns ## COG: NMA2019 COG0173 # Protein_GI_number: 15794899 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aspartyl-tRNA synthetase # Organism: Neisseria meningitidis Z2491 # 1 602 1 602 602 1191 96.0 0 MRTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFATA DSARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDENISEN VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDLETSFL NEDEIMDITEGMAKQVFQDALGVDLGDFPRMPYSEAMFYYGSDKPDMRINLKFTELTDLM KTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYIKVNDVSN LSNGEDSGLQSPIVKFLSENALKEIIERTGAQNGDIIFFGADKAKVVNEAIGALRIKVGL EHGAENGYFVDEWKPLWVVDFPMFEYDEDGDRWAAMHHPFTSPKPGHEDLMATDPENCLA RAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGAPPHGGL AFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNAVDDKQLRELSLRLRQKATENK EA Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:26:56 2011 Seq name: gi|257257184|gb|ACDX02000039.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont38.1, whole genome shotgun sequence Length of sequence - 7983 bp Number of predicted genes - 8, with homology - 7 Number of transcription units - 6, operones - 2 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 236 - 284 16.5 1 1 Tu 1 . - CDS 302 - 787 550 ## COG1522 Transcriptional regulators - Prom 918 - 977 4.6 + Prom 1037 - 1096 1.8 2 2 Op 1 18/0.000 + CDS 1299 - 2399 1907 ## COG0404 Glycine cleavage system T protein (aminomethyltransferase) 3 2 Op 2 . + CDS 2519 - 2905 641 ## COG0509 Glycine cleavage system H protein (lipoate-binding) + Term 2917 - 2949 3.0 + Prom 2925 - 2984 3.6 4 3 Op 1 . + CDS 3013 - 3564 522 ## COG2818 3-methyladenine DNA glycosylase 5 3 Op 2 . + CDS 3700 - 6552 4233 ## COG1003 Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain + Term 6570 - 6606 8.2 - Term 6558 - 6594 8.2 6 4 Tu 1 . - CDS 6639 - 6872 69 ## + Prom 6745 - 6804 2.5 7 5 Tu 1 . + CDS 6832 - 7632 450 ## gi|288576481|ref|ZP_06394421.1| hypothetical protein NEIMUCOT_06628 8 6 Tu 1 . - CDS 7588 - 7908 431 ## COG3293 Transposase and inactivated derivatives Predicted protein(s) >gi|257257184|gb|ACDX02000039.1| GENE 1 302 - 787 550 161 aa, chain - ## HITS:1 COG:NMB0573 KEGG:ns NR:ns ## COG: NMB0573 COG1522 # Protein_GI_number: 15676478 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Neisseria meningitidis MC58 # 4 161 30 187 187 272 87.0 2e-73 MTQQITLDKTDLKILQVLQENGRLTNVELAERISLSPSPCLRRLKQLEDAGIIRRYAALL SSAAVDLGLQAFIRVSISKAKDAREDFAQSVQGWPEVLSCFALTGETDYLLHAFFTDMNA FSHFVLDTLLSHHGVQDAQSSFVLKEIKTTTSLPLSHLVRE >gi|257257184|gb|ACDX02000039.1| GENE 2 1299 - 2399 1907 366 aa, chain + ## HITS:1 COG:NMB0574 KEGG:ns NR:ns ## COG: NMB0574 COG0404 # Protein_GI_number: 15676479 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system T protein (aminomethyltransferase) # Organism: Neisseria meningitidis MC58 # 1 366 1 366 366 715 99.0 0 MTALKTTPFHQAHQDAGAKLVDFAGWELPIHYGSQIAEHEAVRTDAGMFDVSHMLVTDVA GANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNEAETQYRIVSNGA TREKDTAQFHKVGQEFGVAFNPRYDLGMLAVQGPKAIEKLLTVKPEWADVVHNLKPFQGA DLGNDWFVARTGYTGEDGVEVILPGTEAVAFFEALQQAGVQPCGLGARDTLRMEAGMNLY GNDMDDDTSPLEAGMGWTVDLKDESRDFVGKAALLALKEKGVAVKQVGLLLDKGGILRAH MEVLTDKGKGETTSGVFSPSLKQSIAIARVPKDFDGDTAKVLMRGKEVDVRVLKLPFVRN GQKQFD >gi|257257184|gb|ACDX02000039.1| GENE 3 2519 - 2905 641 128 aa, chain + ## HITS:1 COG:NMB0575 KEGG:ns NR:ns ## COG: NMB0575 COG0509 # Protein_GI_number: 15676480 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system H protein (lipoate-binding) # Organism: Neisseria meningitidis MC58 # 1 128 1 128 128 222 96.0 1e-58 MSNNIPAELKYVASHEWLRLEDDGTITVGITHHAQELLGDIVFVELPEVGANLAAEEQAG VVESVKAASDVYAPIAGEVVAVNEDLPSAPETANSDPYGAGWFFKIKPANPADYDGLLTA EQYAGEVD >gi|257257184|gb|ACDX02000039.1| GENE 4 3013 - 3564 522 183 aa, chain + ## HITS:1 COG:NMA1931 KEGG:ns NR:ns ## COG: NMA1931 COG2818 # Protein_GI_number: 15794814 # Func_class: L Replication, recombination and repair # Function: 3-methyladenine DNA glycosylase # Organism: Neisseria meningitidis Z2491 # 1 183 1 183 183 313 80.0 2e-85 MNYCEFVAAIPNDTDNPNKHYHDKQYGFPISDDNELFGRLVLEINQAGLSWTLMLKKQQA FRAAFKDFDIDTVAAFDEADIERLLADAGIVRNRLKINAAIYNALQIKKLQQEYGSFKHW LDAYHPLDKAEWVKLFKKHFKFVGGEIVGEFLMSTGYLPGAHIESCPVYQEVLECRPKWA EVV >gi|257257184|gb|ACDX02000039.1| GENE 5 3700 - 6552 4233 950 aa, chain + ## HITS:1 COG:NMA1934_2 KEGG:ns NR:ns ## COG: NMA1934_2 COG1003 # Protein_GI_number: 15794817 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain # Organism: Neisseria meningitidis Z2491 # 446 950 1 505 505 960 93.0 0 MKLSELFNPNEFAARHLSFGDEAALLEALGEKSMDDFVGNTVPQSIRMPSELDLPEALTE ADALAKLKAIAAKNVINKSYIGLGYYPTRVPNVILRNVLENPGWYTAYTPYQAEIAQGRL EALLNFQQVCIDLTGFPVAGASLLDEATAAAEAMAMAHRVGKVKSERFFVDERVYPQTLD VMKTRAKYFGFELVVGDFAKADEGEYFGALFQYVGKDGDVQDLQSVIGRLKTKGTIVAVA ADIMSLVLLKSPADLGADIALGNTQRFGVPMGFGGPHAAYFAFKDEFKRSAPGRIIGVSK DASGKPALRMALSTREQHIRREKATSNICTAQALLANLAGMYAVYHGPEGVKRIANRIHA LASAFADALASDGIKVVHEVFFDTVTVDFGSKEKADKAFQTALELGYNLRRVSDTQIAAA FHETSVREDLAVLYYAFTGNNTFTLSDDVKGRLKTEFLRQDNILQHPVFNRYHTEHEMLR YLKKLEDRDLAMNRSMISLGSCTMKLNATAEMLPITWAEFSDIHPYAPETQTSGYRELLT DMENSLKAITGFDAISFQPNSGAQGEYSGMLAIRRYQEAQGEAQRNICLIPKSAHGTNPA TAAMLGLKVVVVDTDEHGNVNIDDLKAKAEQHRDALSAIMITYPSTHGVYEEGIRDICRI IHDNGGQVYMDGANLNAQIGIMQPAEVGADVLHMNLHKTFCIPHGGGGPGMGPIGLKAHL APFAPGHTLTDTHSASAKQTAVSSAAFGSSSILPITWMYLTMMGKQGMEQATRWALLNAN YVAKRLSEDYPVLYTGKNGRVAHECIVDLRPLKAESGITETDIAKRLMDYGFHAPTVSFP VAGTLMIEPTESESKAELDRFIAALKQIKQEVLKVERGEWPKDDNPLVNAPHTAADVTGE WVHPYSREEAVFPLPFVRENKFWPSVNRVDDVYGDRNLVCSCPPMEAYED >gi|257257184|gb|ACDX02000039.1| GENE 6 6639 - 6872 69 77 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAGHSKAAKNFTLISFLIEIITCIDIIPNIFSLQTHLHANYVFGNHGLGGLLKEGSHGKS PKCLGGNLGDFAKVSNR >gi|257257184|gb|ACDX02000039.1| GENE 7 6832 - 7632 450 266 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|288576481|ref|ZP_06394421.1| ## NR: gi|288576481|ref|ZP_06394421.1| hypothetical protein NEIMUCOT_06628 [Neisseria mucosa ATCC 25996] hypothetical protein NEIMUCOT_06628 [Neisseria mucosa ATCC 25996] # 1 266 16 281 281 549 100.0 1e-155 MSVKFLAALLWPAMLLPILSHADSGIQTVSVSQAYADDATGCEQLYPVNSFESLFRQMAG TLRSACLLNMPPEDLAQKWQIPVYRRYLRLSGRLRPDGEKQAVLRWKDKAERQKWLKHRR RKLKRPTDGFTVVHQTDYDGSTFLEIEATPDYLKHYRSLFPDNRYPEDLPLPSIDWHLMF RPIFCSDSAVSFGKSLKAIDNLEKSLEAIDNNGHIKNFHARLSINDSVSLYFMHDNQENM RCSKEIDLLRKYSSHCINQPRNQICP >gi|257257184|gb|ACDX02000039.1| GENE 8 7588 - 7908 431 106 aa, chain - ## HITS:1 COG:SP1928 KEGG:ns NR:ns ## COG: SP1928 COG3293 # Protein_GI_number: 15901752 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 5 103 24 124 129 81 47.0 3e-16 MGAQHDMRLARRHLTELYPYKIVIADKGYQGLAKTGLQTPKKKSKHHLLNKQDKEANRRL GKLRTVIEHINRKLKIFKILSLPYRNRRKRFGLRANLIAGLINAMG Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:27:17 2011 Seq name: gi|257257182|gb|ACDX02000040.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont39.1, whole genome shotgun sequence Length of sequence - 4391 bp Number of predicted genes - 5, with homology - 5 Number of transcription units - 2, operones - 1 average op.length - 4.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 46 - 507 280 ## COG3335 Transposase and inactivated derivatives + Term 674 - 709 7.1 + Prom 615 - 674 5.5 2 2 Op 1 56/0.000 + CDS 723 - 1094 645 ## PROTEIN SUPPORTED gi|15676064|ref|NP_273194.1| 30S ribosomal protein S12 3 2 Op 2 51/0.000 + CDS 1212 - 1682 778 ## PROTEIN SUPPORTED gi|59802165|ref|YP_208877.1| 30S ribosomal protein S7 4 2 Op 3 30/0.000 + CDS 1701 - 3806 2108 ## COG0480 Translation elongation factors (GTPases) + Term 3819 - 3867 9.1 + Prom 3816 - 3875 4.0 5 2 Op 4 . + CDS 3896 - 4390 681 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 Predicted protein(s) >gi|257257182|gb|ACDX02000040.1| GENE 1 46 - 507 280 153 aa, chain + ## HITS:1 COG:SP0016 KEGG:ns NR:ns ## COG: SP0016 COG3335 # Protein_GI_number: 15899965 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 42 152 1 111 112 137 57.0 8e-33 MPKVYLDETGFDTFYYRPYAYALRGQIVKARISGKRYERMSLVAARGDRELVAPMIYKGT MDSSLFEAWFGQFLLKELKEPSVIIMDNARFHRMEVLREMAQRAGHIILPLPPYSPELNP IEKVWANIKRHLRKVMSGCLPFEQALLGIFCFV >gi|257257182|gb|ACDX02000040.1| GENE 2 723 - 1094 645 123 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15676064|ref|NP_273194.1| 30S ribosomal protein S12 [Neisseria meningitidis MC58] # 1 123 1 123 123 253 100 2e-67 MPTINQLVRKGRQKPVYVNKVPALEACPQKRGVCTRVYTTTPKKPNSALRKVCKVRLTNG FEVISYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGSLDTAGVKDRKQARSKYGAK RPK >gi|257257182|gb|ACDX02000040.1| GENE 3 1212 - 1682 778 156 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|59802165|ref|YP_208877.1| 30S ribosomal protein S7 [Neisseria gonorrhoeae FA 1090] # 1 156 1 156 156 304 99 9e-83 MPRRREVPKRDVLPDPKFGSVELTKFMNVLMIDGKKSVAERIVYGALEQIEKKTGKAAIE VFNEAIANAKPIVEVKSRRVGGANYQVPVEVRPSRRLALAMRWVRDAARKRGEKSMDLRL AGELIDASEGRGGALKKREEVHRMAEANKAFSHFRF >gi|257257182|gb|ACDX02000040.1| GENE 4 1701 - 3806 2108 701 aa, chain + ## HITS:1 COG:NMA0135 KEGG:ns NR:ns ## COG: NMA0135 COG0480 # Protein_GI_number: 15793163 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Neisseria meningitidis Z2491 # 1 701 1 701 701 1323 98.0 0 MARKTPISLYRNIGISAHIDAGKTTTTERILFYTGLTHKLGEVHDGAATTDYMEQEQERG ITITSAAVTSYWSGMAKQFPEHRFNIIDTPGHVDFTVEVERSMRVLDGAVMVYCAVGGVQ PQSETVWRQANKYQVPRLAFVNKMDRQGANFFRVVEQMKTRLRANPVPIVIPVGAEDSFT GVVDLLKMKSIIWNEADKGTTFTYGDIPAELVETAEEWRQNMIEAAAEASEELMDKYLGG DELTEEEIVGALRQRTLAGEIQPMLCGSAFKNKGVQRMLDAVVELLPAPTDIPPVQGVNP NTEEADSRQASDEEKFSALAFKMLNDKYVGQLTFIRVYSGVVKSGDTVLNSVKGTRERIG RLVQMTAADRTEIEEVRAGDIAAAIGLKDVTTGETLCAESAPIILERMEFPEPVIHIAVE PKTKADQEKMGIALNRLAKEDPSFRVRTDEESGQTIISGMGELHLEIIVDRMKREFGVEA NIGAPQVAYRETIRKEVEAEYKHAKQSGGKGQYGHVVIKMEPMEPGGAGYEFIDEIKGGV IPREFIPSVDKGIRDTLPNGIVAGYPVVDVRVRLIFGSSHDVDSSQLAFELAASQAFKEG MRKANPALLEPIMAVEVETPEEYMGDVMGDLNRRRGVVLGMDDDGIGGKKVRAEVPLAEM FGYSTDLRSATQGRATYSMEFKKYSEAPAHVAAAVTEARKG >gi|257257182|gb|ACDX02000040.1| GENE 5 3896 - 4390 681 165 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 165 1 175 407 266 74 2e-71 MAKEKFERSKPHVNVGTIGHVDHGKTTLTAALTTILAKKFGGAAKAYDQIDNAPEEKARG ITINTSHVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHI LLARQVGVPYIIVFMNKCDMVDDAELLELVEMEIRDLLSSYDFPG Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:27:18 2011 Seq name: gi|257257181|gb|ACDX02000041.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont40.1, whole genome shotgun sequence Length of sequence - 3991 bp Number of predicted genes - 4, with homology - 4 Number of transcription units - 1, operones - 1 average op.length - 4.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 551 - 1672 1353 ## COG1604 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) 2 1 Op 2 . - CDS 1669 - 2043 662 ## TERTU_4363 CRISPR-associated protein, Cmr5 family 3 1 Op 3 . - CDS 2045 - 2950 1123 ## COG1336 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) 4 1 Op 4 . - CDS 3003 - 3863 663 ## Alvin_3130 CRISPR-associated protein, Cmr3 - Prom 3931 - 3990 4.9 Predicted protein(s) >gi|257257181|gb|ACDX02000041.1| GENE 1 551 - 1672 1353 373 aa, chain - ## HITS:1 COG:TM1791 KEGG:ns NR:ns ## COG: TM1791 COG1604 # Protein_GI_number: 15644535 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) # Organism: Thermotoga maritima # 78 251 71 242 244 82 31.0 1e-15 MTIYLMRESLKKLIPDDLKDAHAGLLMQRGLTKWDKDDKQAKAELIQKIVKIPAPKKDSL YALAFTRWVQATSDIDRFATLAAGISGRLYTGLNSAGALETGISTSHTYGMPLIAGSSVK GIARSHAESLGLDKAHLTVLFGDDSDSGSLKSGALVWHDAWFIPANTPPFAAEIITTHHQ DYYNGKQLEADEMESPIPNQQIATQGNFYFVIESAPGAQAWAAYAQNLLFQALQTQGAGS KTASGYGYFTEAGEEARRSIRNIQEAQNKALAAQQKAAELAAMPAHQQFIQTWQERMAAQ TNMTVGNQAHDTFYKEWKAALQTAAESPDFSAKQKAEIAAAFDVKKMMAKYAKWLTGKRP KELKPILEKLSGK >gi|257257181|gb|ACDX02000041.1| GENE 2 1669 - 2043 662 124 aa, chain - ## HITS:1 COG:no KEGG:TERTU_4363 NR:ns ## KEGG: TERTU_4363 # Name: cmr5 # Def: CRISPR-associated protein, Cmr5 family # Organism: T.turnerae # Pathway: not_defined # 5 122 10 127 133 78 35.0 9e-14 MPHIRSQKYAQRALGLIQRVKEKNEKVKEYRTLALNFPTMILQSGLAQAIGFLQAKGKEE HLLLLAHIAELLEENESSLHKKILEADLSHYQLLTRQAIEAASSLKRYTQALLPKPKDEQ GGKS >gi|257257181|gb|ACDX02000041.1| GENE 3 2045 - 2950 1123 301 aa, chain - ## HITS:1 COG:BH0330 KEGG:ns NR:ns ## COG: BH0330 COG1336 # Protein_GI_number: 15612893 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) # Organism: Bacillus halodurans # 2 294 5 298 303 154 31.0 2e-37 MNTHIFHLHALSALHVGTGQGIGAVDLPIARSRATNLPLVPGSALKGVLRDEAKEKWHVS EDDIQALFGADSQADKDNIHAGAAAFGDAHLLLLPIRSFAGTVAFATCPFILQRYARDVR GILPESPKVPALKDSASVPDNTVLRVSGSQIALEDLDIGSETSTEAKQWAEHIAAAVYPE NTANSEAWREQLCQRFIILPDSTFSFLADTATEIRMRIRIDRETRIVKEGALWSEENLPA ESVLYGILAIDKSRHSRNAKSADELSALIPAGETQIQIGGKHTVGRGLCRLVLSDDLTKG E >gi|257257181|gb|ACDX02000041.1| GENE 4 3003 - 3863 663 286 aa, chain - ## HITS:1 COG:no KEGG:Alvin_3130 NR:ns ## KEGG: Alvin_3130 # Name: not_defined # Def: CRISPR-associated protein, Cmr3 # Organism: A.vinosum # Pathway: not_defined # 14 284 146 430 432 179 39.0 1e-43 MYLKNKETDKTELVRLAPQAFDSDTAADFPHADLLPVQIQSTIKGKPQSGATYWDLADLL AWQNGGKLTHEDVNKRGAQSLPIEARTHVGIDRKTLAAEDGRLFQTAAYDFAESARKHHQ GWESHRYGFVIRTAADLQDNSVVRFGGEGRLSRLNKISDDVFKQPEYAYTNGLTLTLLTP ALFEKGWLPGWLDSQTLIGTLPHTNLQIKLRATAIDRWLPVSGWDLQQHAPKAMRKAVSA GAVYWFEIQSGNTAELAQAQWQAFSDNEQDRRDGFGIGLIAPWQSI Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:27:27 2011 Seq name: gi|257257179|gb|ACDX02000042.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont41.1, whole genome shotgun sequence Length of sequence - 3641 bp Number of predicted genes - 5, with homology - 5 Number of transcription units - 4, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 451 394 ## COG2801 Transposase and inactivated derivatives + Prom 520 - 579 2.7 2 2 Tu 1 . + CDS 638 - 1540 1290 ## NT05HA_0643 hypothetical protein + Prom 1547 - 1606 3.1 3 3 Tu 1 . + CDS 1642 - 2448 814 ## COG2801 Transposase and inactivated derivatives - Term 2710 - 2750 10.6 4 4 Op 1 16/0.000 - CDS 2764 - 3075 517 ## PROTEIN SUPPORTED gi|225024696|ref|ZP_03713888.1| hypothetical protein EIKCOROL_01578 5 4 Op 2 . - CDS 3093 - 3641 787 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 Predicted protein(s) >gi|257257179|gb|ACDX02000042.1| GENE 1 2 - 451 394 149 aa, chain + ## HITS:1 COG:RSc2408 KEGG:ns NR:ns ## COG: RSc2408 COG2801 # Protein_GI_number: 17547127 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Ralstonia solanacearum # 6 144 135 274 278 141 54.0 5e-34 KGKDGKLYLSPILDLFNREIIAYAMSRRADSEMVKEMLEKAAPRLTDKGTMLHSDQGVLY RTAEYRKLIAKHSMVQSMSRKANCWDNAPMESFFAVLKTECFYRAGELTVDELMKQIDDY MDYYNRERCSLKLKKLSPVAYRTQLTQSA >gi|257257179|gb|ACDX02000042.1| GENE 2 638 - 1540 1290 300 aa, chain + ## HITS:1 COG:no KEGG:NT05HA_0643 NR:ns ## KEGG: NT05HA_0643 # Name: not_defined # Def: hypothetical protein # Organism: A.aphrophilus # Pathway: not_defined # 10 297 10 297 298 405 68.0 1e-111 MKPFIRAASLLFLAAASALASGKDFIIYDRMDYVGKPDLTADKLSKVFLIYESELVMPDP AGKRKHGVLNEKRIRELARQSYREGYRTISTDIETWFAEKDGQILTPQELKTDFARMYQI FKEENPRAYISNYGLPDEHLHAIRYYQTQADNEAVLAKWRQFSKRRQMSAAISDYANPVF YITTPDLAQWEKDVQTTVAEIRKRYPDKKIIGYLWPQYYSATGSPYFKQFIDAERWKKML EISKKYTDGVIIWSDKRDEHNKIVPWTDPRIQAILKATKSFIADHPKDIQVEKLQPPGNR >gi|257257179|gb|ACDX02000042.1| GENE 3 1642 - 2448 814 268 aa, chain + ## HITS:1 COG:mlr5757 KEGG:ns NR:ns ## COG: mlr5757 COG2801 # Protein_GI_number: 13474791 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Mesorhizobium loti # 59 259 45 251 263 97 33.0 3e-20 MNMHKNTRLTPHHRQAIWLAYTQEKESITSLARRHQVSRVTIYRALKAARGRLLKPQTST NNRFKQAKYGMKRLAKVERGIQEKLKRQAKRYNKSYPGEPVHLDTKRLPLLKGQKATDKR DYLFVAIDDFSRELYVAILPDKTADSAAKFLTEYLIDPCPYLIECVYSDNGTEYKGSANH AFGVACYENGIGQKFTRVARPQTNGKAERVIRTLMEMWHEKQLFDSPEHRRKELYRFVNF YNTVKPHRSLNGDTPFEVLQAYFSQPVV >gi|257257179|gb|ACDX02000042.1| GENE 4 2764 - 3075 517 103 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225024696|ref|ZP_03713888.1| hypothetical protein EIKCOROL_01578 [Eikenella corrodens ATCC 23834] # 1 103 1 103 103 203 100 1e-52 MANQKIRIRLKAYDYSLIDRSAQEIVETAKRTGAVVKGPIPLPTKIERFNILRSPHVNKT SREQLEIRTHLRLMDIVDWTDKTTDALMKLDLPAGVDVEIKVQ >gi|257257179|gb|ACDX02000042.1| GENE 5 3093 - 3641 787 182 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 181 226 406 407 307 80 7e-84 LPIEDVFSISGRGTVVTGRVERGVIHVGDEIEIVGLKETQKTTCTGVEMFRKLLDEGQAG DNVGVLLRGTKREEVERGQVLAKPGTITPHTKFKAEVYVLSKEEGGRHTPFFANYRPQFY FRTTDVTGAVTLEEGVEMVMPGENVAITVELIAPIAMEEGLRFAIREGGRTVGAGVVSSI IA Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:27:34 2011 Seq name: gi|257257178|gb|ACDX02000043.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont42.1, whole genome shotgun sequence Length of sequence - 3130 bp Number of predicted genes - 4, with homology - 4 Number of transcription units - 4, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 60 - 296 254 ## COG3039 Transposase and inactivated derivatives, IS5 family + Prom 579 - 638 6.6 2 2 Tu 1 . + CDS 694 - 1824 1853 ## COG0505 Carbamoylphosphate synthase small subunit + Prom 1850 - 1909 2.3 3 3 Tu 1 . + CDS 1968 - 2225 530 ## NLA_17960 hypothetical protein + Prom 2247 - 2306 3.6 4 4 Tu 1 . + CDS 2399 - 2788 455 ## COG2852 Uncharacterized protein conserved in bacteria + Term 2973 - 3000 0.1 Predicted protein(s) >gi|257257178|gb|ACDX02000043.1| GENE 1 60 - 296 254 78 aa, chain + ## HITS:1 COG:NMB1399 KEGG:ns NR:ns ## COG: NMB1399 COG3039 # Protein_GI_number: 15677260 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS5 family # Organism: Neisseria meningitidis MC58 # 1 78 247 324 324 141 94.0 2e-34 MRKAHRNRPLTEDQTKRNRYLSKTRYVVEQSFGTLHRKFRYARAAYFGLVKVSAQSHLKA MCLNLLKAANKLSVPVAA >gi|257257178|gb|ACDX02000043.1| GENE 2 694 - 1824 1853 376 aa, chain + ## HITS:1 COG:NMA0608 KEGG:ns NR:ns ## COG: NMA0608 COG0505 # Protein_GI_number: 15793598 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase small subunit # Organism: Neisseria meningitidis Z2491 # 1 376 1 376 377 743 96.0 0 MTTPALLVLADGSVFHGTSIGYEGSTSGEVVFNTSMTGYQEILTDPSYCKQIVTLTYPHI GNTGTNAEDEESRSVYAAGLIIRDLPLLHSNFRASESLHDYLVRNKTVAIADIDTRRLTT LLREKGAQGGAILTGADATVEKARELIAAFGSMVGKDLAKEVSCQEAYEWTEGEWALGKG FVTPAEQPFHVVAYDFGVKTNILRMLAARGCRLTVVPAQTSAEDVLALNPDGVFLSNGPG DPEPCTYAIEAVQKLMASGKPIFGICLGHQLISLAIGAKTLKMHFSHHGANHPVQDLDSG KVVITSQNHGFAVDADTLPANARITHKSLFDSTLQGIELTDKPVFCFQGHPEASPGPQDV GYLFDKFIDNMKAAKQ >gi|257257178|gb|ACDX02000043.1| GENE 3 1968 - 2225 530 85 aa, chain + ## HITS:1 COG:no KEGG:NLA_17960 NR:ns ## KEGG: NLA_17960 # Name: not_defined # Def: hypothetical protein # Organism: N.lactamica # Pathway: not_defined # 1 85 1 85 85 142 85.0 3e-33 MTEKQMRVLSVVATLTAVGMYVSYIPQIQNNLAGNPGSPLQPLVATINCTLWVAYGFLKE KRDYPVMLANAPGIILGLITFITSF >gi|257257178|gb|ACDX02000043.1| GENE 4 2399 - 2788 455 129 aa, chain + ## HITS:1 COG:NMA0605 KEGG:ns NR:ns ## COG: NMA0605 COG2852 # Protein_GI_number: 15793595 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 129 1 129 129 229 92.0 1e-60 MNTPEKLLTADNPALRQRAKAMRQEMSEAEAKLWQHLRAGRLNGYKFRRQQPMGNYIVDF MCVTPKLIIEADGGQHTEQAAYDHARTAYLNSLGFAVLRFWNHEILQQTNDVLTEILRVL QELEKQPAQ Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:27:37 2011 Seq name: gi|257257176|gb|ACDX02000044.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont43.1, whole genome shotgun sequence Length of sequence - 2880 bp Number of predicted genes - 8, with homology - 6 Number of transcription units - 5, operones - 2 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 118 - 363 222 ## COG4396 Mu-like prophage host-nuclease inhibitor protein Gam + Term 396 - 446 14.1 - Term 383 - 434 11.2 2 2 Op 1 . - CDS 452 - 667 464 ## NMA1292 hypothetical protein 3 2 Op 2 . - CDS 671 - 847 199 ## gi|261366034|ref|ZP_05978917.1| hypothetical protein NEIMUCOT_06654 4 2 Op 3 . - CDS 851 - 1429 819 ## COG3646 Uncharacterized phage-encoded protein + Prom 1232 - 1291 2.1 5 3 Tu 1 . + CDS 1436 - 1720 80 ## + Term 1799 - 1839 5.3 6 4 Tu 1 . - CDS 1588 - 1755 145 ## - Prom 1966 - 2025 10.0 + Prom 2075 - 2134 8.5 7 5 Op 1 . + CDS 2169 - 2573 303 ## COG4382 Mu-like prophage protein gp16 8 5 Op 2 . + CDS 2570 - 2879 154 ## NMCC_1014 integral membrane protein Predicted protein(s) >gi|257257176|gb|ACDX02000044.1| GENE 1 118 - 363 222 81 aa, chain + ## HITS:1 COG:NMA1291 KEGG:ns NR:ns ## COG: NMA1291 COG4396 # Protein_GI_number: 15794220 # Func_class: R General function prediction only # Function: Mu-like prophage host-nuclease inhibitor protein Gam # Organism: Neisseria meningitidis Z2491 # 2 80 94 172 172 126 79.0 1e-29 MTGLVKWRIRPPSVKVTGVAAVLAWMSEKTAYQSFIRTKQEIDKDAILNEREQFANGQVP GIKIVSGLEDFVIEPTEQELA >gi|257257176|gb|ACDX02000044.1| GENE 2 452 - 667 464 71 aa, chain - ## HITS:1 COG:no KEGG:NMA1292 NR:ns ## KEGG: NMA1292 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_A # Pathway: not_defined # 1 71 1 71 71 110 100.0 1e-23 MNTTYTLTFDQDSLKALNLLVFTLNHLKVLDMDMEGIEDGLSAVIETASEKADKLSAAFY NAVYEQEEKAA >gi|257257176|gb|ACDX02000044.1| GENE 3 671 - 847 199 58 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261366034|ref|ZP_05978917.1| ## NR: gi|261366034|ref|ZP_05978917.1| hypothetical protein NEIMUCOT_06654 [Neisseria mucosa ATCC 25996] hypothetical protein NEIMUCOT_06654 [Neisseria mucosa ATCC 25996] # 1 58 1 58 58 97 100.0 3e-19 MNTEFALNQLSNALNFIGTNLLDRKAMPREEMEQCGCLLLVLSEYANILDRKQKEKEV >gi|257257176|gb|ACDX02000044.1| GENE 4 851 - 1429 819 192 aa, chain - ## HITS:1 COG:PM1774 KEGG:ns NR:ns ## COG: PM1774 COG3646 # Protein_GI_number: 15603639 # Func_class: S Function unknown # Function: Uncharacterized phage-encoded protein # Organism: Pasteurella multocida # 15 106 37 128 239 87 42.0 1e-17 MTTQTLVRISGDRLVTTSLEISNHFGKKHKDILRAIQHLECSKEFNERNFAPVGYTDAKG EQRPMYEITRDGFVFLCMGFTGSAAAQWKEKYIAAFNALEAEVARRHAPALEKLKTAYLS ARPDMAHLLRYIEMGLNQAEAAKLLGIAPSNVRHRLKHLADLGLTEYRPDPKYRNRHALA AAHGQQSLGLEG >gi|257257176|gb|ACDX02000044.1| GENE 5 1436 - 1720 80 94 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTFLFTRLNGQEKDSAKIAFPYSPPSSRLAGISVTAFAVGRIINVDTLRVNYFLIFSLMI DLTHWEKSIFWAYSKSSFSVSALNETFLITRFCS >gi|257257176|gb|ACDX02000044.1| GENE 6 1588 - 1755 145 55 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVDEKLAENRKRYEQKRVIKKVSFNAETEKELLEYAQNIDFSQWVKSIIKEKIKK >gi|257257176|gb|ACDX02000044.1| GENE 7 2169 - 2573 303 134 aa, chain + ## HITS:1 COG:NMB0985 KEGG:ns NR:ns ## COG: NMB0985 COG4382 # Protein_GI_number: 15676876 # Func_class: S Function unknown # Function: Mu-like prophage protein gp16 # Organism: Neisseria meningitidis MC58 # 1 134 22 158 165 156 61.0 1e-38 MRRALIAKIKIAQKELGLDDATYRAVLERVTGKRSCTECSIPELERVVEDLRQHGFQPKK TAGQRPNRRDSADPMMRKIEALLLDNGWTWNYAHGTAKKMFKVDRVEWLSDGNMHKLVAA LQISANRKKKEKTG >gi|257257176|gb|ACDX02000044.1| GENE 8 2570 - 2879 154 103 aa, chain + ## HITS:1 COG:no KEGG:NMCC_1014 NR:ns ## KEGG: NMCC_1014 # Name: not_defined # Def: integral membrane protein # Organism: N.meningitidis_053442 # Pathway: not_defined # 1 103 1 103 159 207 99.0 1e-52 MSLNWEMTEQDFEDVKHLLPHSVVAMITVIGLEAAFHMVKVWGGTNYPISNRRRNTRQSR ILHAQLVEDIGEEAAGRLERAYVGQPFLAIPRCWDAMRELRNR Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:27:57 2011 Seq name: gi|257257175|gb|ACDX02000045.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont44.1, whole genome shotgun sequence Length of sequence - 2799 bp Number of predicted genes - 3, with homology - 2 Number of transcription units - 3, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 2 2 Tu 1 . - CDS 1244 - 1423 66 ## - Prom 1467 - 1526 1.8 + Prom 2061 - 2120 4.0 3 3 Tu 1 . + CDS 2154 - 2799 395 ## COG3719 Ribonuclease I Predicted protein(s) >gi|257257175|gb|ACDX02000045.1| GENE 1 572 - 1333 99 253 aa, chain + ## HITS:1 COG:SMc03094 KEGG:ns NR:ns ## COG: SMc03094 COG3231 # Protein_GI_number: 15966752 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aminoglycoside phosphotransferase # Organism: Sinorhizobium meliloti # 5 253 16 261 261 141 36.0 1e-33 MDADLYGYKWARDNVGQSGATIYRLYGKPDAPELFLKHGKGSVANDVTDEMVRLNWLTEF MPLPTIKHFIRTPDDAWLLTTAIPGKTAFQVLEEYPDSGENIVDALAVFLRRLHSIPVCN CPFNGDRVFRLAQAQSRMNNGLVGASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGD FSLDNLIFDEGKLIGCIDVGRVGIADRYQDLAILWNCLGEFSPSLQKRLFQKYGIDNPDM NKLQFHLMLDEFF >gi|257257175|gb|ACDX02000045.1| GENE 2 1244 - 1423 66 59 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLVRGAEPMEKRQQRRKVHPKVSQVITFGPSEKLIEHQVKLQFIHIRIINTIFLKKPFL >gi|257257175|gb|ACDX02000045.1| GENE 3 2154 - 2799 395 215 aa, chain + ## HITS:1 COG:rna KEGG:ns NR:ns ## COG: rna COG3719 # Protein_GI_number: 16128594 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonuclease I # Organism: Escherichia coli K12 # 1 215 1 215 268 438 99.0 1e-123 MKAFWRNAALLAVSLLPFSSANALALQAKQYGDFDRYVLALSWQTGFCQSQHDRNRNERD ECRLQTETTNKADFLTVHGLWPGLPKSVAARGVDERHWMRFGCATRPIPNLPEARASRMC SSPETGLSLETAAKLSEVMPGAGGRSCLERYEYAKHGACFGFDPDAYFGTMVRLNQEIKE SEAGKFLADNYGKTVSRRDFDAAFAKSWGKENVKA Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:28:03 2011 Seq name: gi|257257173|gb|ACDX02000046.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont45.1, whole genome shotgun sequence Length of sequence - 2458 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + 5S_RRNA 339 - 447 100.0 # CP000381 [D:61720..61828] # 5S ribosomal RNA # Neisseria meningitidis 053442 # Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria. + Prom 773 - 832 7.2 1 1 Tu 1 . + CDS 886 - 1203 423 ## COG1555 DNA uptake protein and related DNA-binding proteins + Term 1258 - 1295 3.1 - Term 1399 - 1441 -0.8 2 2 Tu 1 . - CDS 1658 - 2353 725 ## COG3039 Transposase and inactivated derivatives, IS5 family Predicted protein(s) >gi|257257173|gb|ACDX02000046.1| GENE 1 886 - 1203 423 105 aa, chain + ## HITS:1 COG:NMB1657 KEGG:ns NR:ns ## COG: NMB1657 COG1555 # Protein_GI_number: 15677506 # Func_class: L Replication, recombination and repair # Function: DNA uptake protein and related DNA-binding proteins # Organism: Neisseria meningitidis MC58 # 17 105 117 205 205 94 58.0 4e-20 MIGKRPYEKFLFAALSVLTASLSLAAVNINTASPSELEALPGIGPAKAKAIADYRQQHGA FKSVEELKNVKGIGEGIFSKLKAEATVAPAPANTKAKNAVPSPKK >gi|257257173|gb|ACDX02000046.1| GENE 2 1658 - 2353 725 231 aa, chain - ## HITS:1 COG:NMB1539 KEGG:ns NR:ns ## COG: NMB1539 COG3039 # Protein_GI_number: 15677391 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS5 family # Organism: Neisseria meningitidis MC58 # 8 231 112 335 335 395 90.0 1e-110 MPLPQPAAQDDTLSELLELINHQLTEKGLKVEKASAAVIDATIIQTAGSKQRQAIEVDEE GQVRGQTTPSKDSDARWTKKNGLYKLGYKQHTRTDEEGYIEKLHITPANTHECNHLSPLL EGIAKGTTVYADKGYDSKENRQHLEEHRLQDGIMRKAHRNRPLTEAQTKRNRYLSKTRYV VEQSFGTLHRKFRYARAAYFGLLKVSAQNHLKAICLNLLKADNRLSVPVCA Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:28:04 2011 Seq name: gi|257257172|gb|ACDX02000047.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont46.1, whole genome shotgun sequence Length of sequence - 2239 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + 5S_RRNA 143 - 251 100.0 # CP000381 [D:61720..61828] # 5S ribosomal RNA # Neisseria meningitidis 053442 # Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria. + Prom 406 - 465 4.5 1 1 Tu 1 . + CDS 535 - 1542 1311 ## COG3039 Transposase and inactivated derivatives, IS5 family + Prom 1695 - 1754 7.2 2 2 Tu 1 . + CDS 1827 - 2126 451 ## COG1555 DNA uptake protein and related DNA-binding proteins + Term 2181 - 2218 3.1 Predicted protein(s) >gi|257257172|gb|ACDX02000047.1| GENE 1 535 - 1542 1311 335 aa, chain + ## HITS:1 COG:NMB1539 KEGG:ns NR:ns ## COG: NMB1539 COG3039 # Protein_GI_number: 15677391 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS5 family # Organism: Neisseria meningitidis MC58 # 1 335 1 335 335 633 93.0 0 MSTFFQQTAQAMIAKHIDHFPLLKLDQVIDWQPIEQYLNRQRTRYLRDHRGRPAYPLLSM FKAILLGQWHSLSDPELEHSLITRIDFNLFCRFDELSIPDYSTLCRYRNWLAQDNTLSEL LELINCQLTEKGLKIEKASAAVIDATIIQTAGSKQRQAIEVDEEGQVSGQTTPSKDSDAR WTKKNGLYKLGYKQHTRTDEEGYIEKLHITPANTHECNHLSPLLEGIAEGTTVYADKGYD SAENRQHLKEHRLLDGIMRKAHRNRPLTEAQTKRNRYLSKTRYVVEQSFGTLHRKFRYAR AAYFGLIKVSAQSHLKAMCLNLLKAANKLSVSVAA >gi|257257172|gb|ACDX02000047.1| GENE 2 1827 - 2126 451 99 aa, chain + ## HITS:1 COG:NMB1657 KEGG:ns NR:ns ## COG: NMB1657 COG1555 # Protein_GI_number: 15677506 # Func_class: L Replication, recombination and repair # Function: DNA uptake protein and related DNA-binding proteins # Organism: Neisseria meningitidis MC58 # 1 99 107 205 205 96 55.0 9e-21 MKKFLFAALSVLTASLSLAAVNINTASPSELEALPGIGPAKAKAIADYRQQHGAFKSVEE LKNVKGIGEGIFSKLKAEATVAPAPANTKAKNAVPSPKK Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:28:06 2011 Seq name: gi|257257170|gb|ACDX02000048.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont47.1, whole genome shotgun sequence Length of sequence - 2182 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 2, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 150 - 209 5.1 1 1 Tu 1 . + CDS 294 - 1241 556 ## COG2801 Transposase and inactivated derivatives 2 2 Op 1 . - CDS 1259 - 1579 431 ## COG3293 Transposase and inactivated derivatives 3 2 Op 2 . - CDS 1635 - 2054 371 ## Aasi_1471 hypothetical protein - Prom 2105 - 2164 8.3 Predicted protein(s) >gi|257257170|gb|ACDX02000048.1| GENE 1 294 - 1241 556 315 aa, chain + ## HITS:1 COG:RSc1436 KEGG:ns NR:ns ## COG: RSc1436 COG2801 # Protein_GI_number: 17546155 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Ralstonia solanacearum # 76 313 1 247 278 180 46.0 3e-45 MDTRLSRRRHRRTRTSPIQNHDRPPQKPLHRRQTRPRKNTGRAYRRVVLYARKGCLPKGV KSPQPKADRKGQSQTVQTLRAQHPLKYLLHIANLPKSSFYYHHQDRPDPDEADKALLVET YQRHKGRYGQRRIAAALDWNRKKVARLMKQMELKALIRAKKAYRHPAMGEISEHLLKRRF TAKKPNEKWLTDVTELKGKDGKLYLSPILDLFNREIIAYAMSRRADSEMVKEMLEKAAPR LTDKGTMLHSDQGVLYRTAEYRKLIAKHSMVQSMSRKANCWDNAPMESFFAVLKTECFYR AGELTVDELMKQIDD >gi|257257170|gb|ACDX02000048.1| GENE 2 1259 - 1579 431 106 aa, chain - ## HITS:1 COG:SP1928 KEGG:ns NR:ns ## COG: SP1928 COG3293 # Protein_GI_number: 15901752 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 5 103 24 124 129 80 46.0 6e-16 MGAQHDMRLARRHLTELYPYKIVIADKGYQGLAKTGLQTPKKKSKHHLMNKQDKEANRRL GKLRTVIEHINRKLKIFKILSLPYRNRRKRFGLRANLIAGLINAMG >gi|257257170|gb|ACDX02000048.1| GENE 3 1635 - 2054 371 139 aa, chain - ## HITS:1 COG:no KEGG:Aasi_1471 NR:ns ## KEGG: Aasi_1471 # Name: not_defined # Def: hypothetical protein # Organism: A.asiaticus # Pathway: not_defined # 1 129 13 147 157 96 45.0 3e-19 MKYENLIQRSDREFKRLTGVTPVLFHEMLQITTEAESRKVKSGRPHTLSLADQLLLTLSY LRHYHTQLELAAIYGLSESNVCRTIRKTEDALIRCKRFSLPKHKNPGDHTVIIDVTESPI ERPKKTAAVLQRQEKAAHG Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:28:09 2011 Seq name: gi|257257169|gb|ACDX02000049.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont48.1, whole genome shotgun sequence Length of sequence - 1773 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:28:10 2011 Seq name: gi|257257167|gb|ACDX02000050.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont49.1, whole genome shotgun sequence Length of sequence - 1522 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 2, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 9 - 68 6.2 1 1 Tu 1 . + CDS 134 - 433 476 ## COG1555 DNA uptake protein and related DNA-binding proteins + Term 488 - 525 3.1 + Prom 586 - 645 3.3 2 2 Op 1 6/0.000 + CDS 685 - 1035 293 ## PROTEIN SUPPORTED gi|148984739|ref|ZP_01818007.1| IS630-Spn1, transposase Orf1 3 2 Op 2 . + CDS 1044 - 1361 64 ## COG3335 Transposase and inactivated derivatives + Term 1367 - 1404 2.7 Predicted protein(s) >gi|257257167|gb|ACDX02000050.1| GENE 1 134 - 433 476 99 aa, chain + ## HITS:1 COG:NMB1657 KEGG:ns NR:ns ## COG: NMB1657 COG1555 # Protein_GI_number: 15677506 # Func_class: L Replication, recombination and repair # Function: DNA uptake protein and related DNA-binding proteins # Organism: Neisseria meningitidis MC58 # 1 99 107 205 205 96 55.0 9e-21 MKKFLFAALSVLTASLSLAAVNINTASPSELEALPGIGPAKAKAIADYRQQHGAFKSVEE LKNVKGIGEGIFSKLKAEATVAPAPANTKAKNAVPSPKK >gi|257257167|gb|ACDX02000050.1| GENE 2 685 - 1035 293 116 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148984739|ref|ZP_01818007.1| IS630-Spn1, transposase Orf1 [Streptococcus pneumoniae SP3-BS71] # 1 116 1 116 116 117 49 6e-27 MAYSTDLRHKALNYYEQCKNISQTAATFNLSRNTLYLWIRLKKQTGSLKHQVTGLNAVKL DRQKLAQYVEQHQDAYLHEIAKHFDCTPAAVCYALKQMGMTRKKRPPLTKNKIRPK >gi|257257167|gb|ACDX02000050.1| GENE 3 1044 - 1361 64 105 aa, chain + ## HITS:1 COG:SP0300 KEGG:ns NR:ns ## COG: SP0300 COG3335 # Protein_GI_number: 15900234 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 51 103 1 53 112 65 54.0 2e-11 MTQLAGFSDYQRVYLDETGFDRYLFRPYARSLRGQIVKAQISGKRYRRLSLVSAQVGNRL IAPMVYQNTMTGVFFEAWFQQCLLPALTQKSVIILDNETFAKIVC Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:28:11 2011 Seq name: gi|257257166|gb|ACDX02000051.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont50.1, whole genome shotgun sequence Length of sequence - 1509 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 20 - 1156 304 ## PROTEIN SUPPORTED gi|89068227|ref|ZP_01155637.1| 30S ribosomal protein S2 2 1 Op 2 . - CDS 1207 - 1419 210 ## gi|261366057|ref|ZP_05978940.1| iron-regulated protein FrpA Predicted protein(s) >gi|257257166|gb|ACDX02000051.1| GENE 1 20 - 1156 304 378 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|89068227|ref|ZP_01155637.1| 30S ribosomal protein S2 [Oceanicola granulosus HTCC2516] # 120 355 357 538 620 121 36 3e-28 MHGGEGSDILNGGAGDDRLYGGSSEADTYVFEKGHGKDVVSDSAYQAAHTDTLRFNGAKF AEAVFTRSGNNLVIKAYGGEDAVTVQGYFDSSSYRYYDFAFDDKTVTAKDMAGMKVEGVG TDGNESLYGWDTADVLDGGKGNDYLSGYNGDDLLKGGEGNDSLYGGEGVDTLEGNAGNDY LSGEKGADILKGGEGNDELHGGEGSDILNGGAGDDRLYGGSSEADTYVFEKGHGKDVVSD SAYQAAHTDTLRFNGAKFAEAVFTRSGNNLVIKAYGGEDAVTVQGYFDSSSYRYYDFAFD DKTVTAKDMAGMKVEGVGTDGNESLYGWDTADVLDGGKGNDYLSGYNGDDLLKGGKATTA FTAAKALTRWKVMRAMIT >gi|257257166|gb|ACDX02000051.1| GENE 2 1207 - 1419 210 70 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261366057|ref|ZP_05978940.1| ## NR: gi|261366057|ref|ZP_05978940.1| iron-regulated protein FrpA [Neisseria mucosa ATCC 25996] iron-regulated protein FrpA [Neisseria mucosa ATCC 25996] # 1 70 309 378 378 94 100.0 2e-18 MAGMKVEGVGTDGNESLYGWDTADVLDGGKGNDYLSGYNGDDLLKGGKATTAFTAAKALT RWKVMRAMIT Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:28:18 2011 Seq name: gi|257257164|gb|ACDX02000052.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont51.1, whole genome shotgun sequence Length of sequence - 1231 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 518 - 1229 428 ## DNO_0760 hypothetical protein Predicted protein(s) >gi|257257164|gb|ACDX02000052.1| GENE 1 518 - 1229 428 237 aa, chain + ## HITS:1 COG:no KEGG:DNO_0760 NR:ns ## KEGG: DNO_0760 # Name: not_defined # Def: hypothetical protein # Organism: D.nodosus # Pathway: not_defined # 124 237 177 294 558 105 40.0 2e-21 MTALEGRLKAQSEPSFAISACASGIQSGMDGLNGCSGANTTASLFLTGCGGDTQAARAGE LLETHSDSTFSDDALLVGCLQSDIPAAVDLARCFSPKSLPAVTVPCEYYEIPVEPEPVPE TYVCGIRPPSNRLALRFYRRKIAHDPRHIPLPFACFDTAKTPVLNGYIMKNTVKATADGQ PIELFSASFTADTGGYCWQGSLTVSPEDFAQINPDARAKGEEAQIKVQINADTFVII Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:28:23 2011 Seq name: gi|257257163|gb|ACDX02000053.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont52.1, whole genome shotgun sequence Length of sequence - 733 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 2 - 476 167 ## COG2801 Transposase and inactivated derivatives 2 1 Op 2 . - CDS 239 - 589 389 ## NLA_8450 transposase - Prom 672 - 731 6.0 Predicted protein(s) >gi|257257163|gb|ACDX02000053.1| GENE 1 2 - 476 167 158 aa, chain - ## HITS:1 COG:yi5B KEGG:ns NR:ns ## COG: yi5B COG2801 # Protein_GI_number: 16131429 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 74 158 2 93 283 60 41.0 2e-09 MDTRLSRRRHRRTRTSPIQNHDRPPQKPLHRRQTRPRKNTGRAYRRVVLYARKGCLPKGV KSPQPKADRKGQSQTVQTLRAQHPLKYLLHIANLPKSSFYYHHQDRPDPDAADKALIAEI YERHKGRYGQRRIAAALDWNRKKVARLMKQMELKALIR >gi|257257163|gb|ACDX02000053.1| GENE 2 239 - 589 389 116 aa, chain - ## HITS:1 COG:no KEGG:NLA_8450 NR:ns ## KEGG: NLA_8450 # Name: not_defined # Def: transposase # Organism: N.lactamica # Pathway: not_defined # 1 116 106 221 221 206 94.0 2e-52 MSKYTLHFKYQAVLHYLHIRSQQRTADHYGISRTHLRRWIRAYQEGGIGALEHPQSKTMT DHRKNPFIVDKPDHEKTQAELIEELCYMRAKVAYLKELKALSQKRTAKDKAKPSKH Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:28:26 2011 Seq name: gi|257257161|gb|ACDX02000054.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont53.1, whole genome shotgun sequence Length of sequence - 645 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 427 - 643 71 ## Predicted protein(s) >gi|257257161|gb|ACDX02000054.1| GENE 1 427 - 643 71 72 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSFPRPGCSSREDCGGLLDRGRNNMCGRGSQKRDPDRHRPLCPQLSPSGRPLPCCGFGAW NLLGPNPKPNPT Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:28:32 2011 Seq name: gi|257257160|gb|ACDX02000055.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont54.1, whole genome shotgun sequence Length of sequence - 626 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 176 - 235 7.2 1 1 Tu 1 . + CDS 308 - 607 476 ## COG1555 DNA uptake protein and related DNA-binding proteins Predicted protein(s) >gi|257257160|gb|ACDX02000055.1| GENE 1 308 - 607 476 99 aa, chain + ## HITS:1 COG:NMB1657 KEGG:ns NR:ns ## COG: NMB1657 COG1555 # Protein_GI_number: 15677506 # Func_class: L Replication, recombination and repair # Function: DNA uptake protein and related DNA-binding proteins # Organism: Neisseria meningitidis MC58 # 1 99 107 205 205 96 55.0 9e-21 MKKFLFAALSVLTASLSLAAVNINTASPSELEALPGIGPAKAKAIADYRQQHGAFKSVEE LKNVKGIGEGIFSKLKAEATVAPAPANTKAKNAVPSPKK Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:28:33 2011 Seq name: gi|257257158|gb|ACDX02000056.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont55.1, whole genome shotgun sequence Length of sequence - 610 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 187 - 345 95 ## - Prom 397 - 456 4.3 Predicted protein(s) >gi|257257158|gb|ACDX02000056.1| GENE 1 187 - 345 95 52 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFKGKKHWPHWPYLCCSLHLFMLLMKVLAKFTLRGRLLKHLVKFIQKILIKT Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:28:38 2011 Seq name: gi|257257157|gb|ACDX02000057.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont56.1, whole genome shotgun sequence Length of sequence - 557 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 502 284 ## COG2189 Adenine specific DNA methylase Mod Predicted protein(s) >gi|257257157|gb|ACDX02000057.1| GENE 1 1 - 502 284 167 aa, chain - ## HITS:1 COG:STM0357 KEGG:ns NR:ns ## COG: STM0357 COG2189 # Protein_GI_number: 16763737 # Func_class: L Replication, recombination and repair # Function: Adenine specific DNA methylase Mod # Organism: Salmonella typhimurium LT2 # 1 164 131 293 652 150 47.0 1e-36 MIYIDPPYNTGSDGFVYQDDRKFTPEELARLANIDEDEAARILDFTDKGSNSHSAWLTFM YPRLYIARELLKDDGVIFISIDDNEAAQLKLLCDEVFGEGNFVEQIIWEKKFSPQNDAKY FSENHDYLICYAKNITELEIKLLPRTEGTNARYKNIDNDPRGAWTSG Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:28:38 2011 Seq name: gi|257257155|gb|ACDX02000058.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont57.1, whole genome shotgun sequence Length of sequence - 554 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 37 - 387 212 ## JW5438 hypothetical protein + Term 445 - 491 2.7 Predicted protein(s) >gi|257257155|gb|ACDX02000058.1| GENE 1 37 - 387 212 116 aa, chain + ## HITS:1 COG:no KEGG:JW5438 NR:ns ## KEGG: JW5438 # Name: ygbF # Def: hypothetical protein # Organism: E.coli_J # Pathway: not_defined # 23 116 1 94 94 177 100.0 1e-43 MHSLLPFRFLFHWEMQAIGVAEMSMLVVVTENVPPRLRGRLAIWLLEVRAGVYVGDVSAK IREMIWEQIAGLAEEGNVVMAWATNTETGFEFQTFGLNRRTPVDLDGLRLVSFLPV Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:28:41 2011 Seq name: gi|257257154|gb|ACDX02000059.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont58.1, whole genome shotgun sequence Length of sequence - 527 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 144 - 527 396 ## COG0466 ATP-dependent Lon protease, bacterial type Predicted protein(s) >gi|257257154|gb|ACDX02000059.1| GENE 1 144 - 527 396 127 aa, chain - ## HITS:1 COG:NMB1231 KEGG:ns NR:ns ## COG: NMB1231 COG0466 # Protein_GI_number: 15677103 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATP-dependent Lon protease, bacterial type # Organism: Neisseria meningitidis MC58 # 1 125 291 415 820 223 92.0 4e-59 ATVVRNYIDTCSNCRRKKKSRVSKDIAKADLVLNADHYGLEKVKERILEYLAVQKRMDKL KGPILCLVGPPGVGKTSLGESIAKATGRKYVRMALGGVRDESEIRGHRRTYIGSMPGKIL QNMAKQV Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:28:42 2011 Seq name: gi|257257152|gb|ACDX02000060.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont59.1, whole genome shotgun sequence Length of sequence - 524 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:28:42 2011 Seq name: gi|257257151|gb|ACDX02000061.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont60.1, whole genome shotgun sequence Length of sequence - 517 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 69 - 410 267 ## COG4993 Glucose dehydrogenase Predicted protein(s) >gi|257257151|gb|ACDX02000061.1| GENE 1 69 - 410 267 113 aa, chain + ## HITS:1 COG:ECs0128 KEGG:ns NR:ns ## COG: ECs0128 COG4993 # Protein_GI_number: 15829382 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose dehydrogenase # Organism: Escherichia coli O157:H7 # 10 111 513 614 796 210 99.0 4e-55 MANWWFRHRKKPVPQGAAKGDYVTPTQPFSELSFRPTKDLSGADMWGATMFDQLVCRVMF HQMRYEGIFTPPSEQGTLVFPGNLGMFEWGGISVDPNREVAIANPMALPFVRN Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:28:43 2011 Seq name: gi|257257149|gb|ACDX02000062.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont61.1, whole genome shotgun sequence Length of sequence - 519 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 19 - 517 498 ## COG1250 3-hydroxyacyl-CoA dehydrogenase Predicted protein(s) >gi|257257149|gb|ACDX02000062.1| GENE 1 19 - 517 498 166 aa, chain + ## HITS:1 COG:fadB_2 KEGG:ns NR:ns ## COG: fadB_2 COG1250 # Protein_GI_number: 16131692 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyacyl-CoA dehydrogenase # Organism: Escherichia coli K12 # 1 166 152 317 423 343 100.0 9e-95 MPLVEIIRGEKSSDETIAKVVAWASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLRDG ADFRKIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAGFPQRMQKDYRDAIDALFD ANRFGQKNGLGFWRYKEDSKGKPKKEEDAAVEDLLAEVSQPKRDFS Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:28:44 2011 Seq name: gi|257257148|gb|ACDX02000063.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont62.1, whole genome shotgun sequence Length of sequence - 518 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 474 326 ## COG2194 Predicted membrane-associated, metal-dependent hydrolase Predicted protein(s) >gi|257257148|gb|ACDX02000063.1| GENE 1 3 - 474 326 157 aa, chain - ## HITS:1 COG:ZyijP KEGG:ns NR:ns ## COG: ZyijP COG2194 # Protein_GI_number: 15804551 # Func_class: R General function prediction only # Function: Predicted membrane-associated, metal-dependent hydrolase # Organism: Escherichia coli O157:H7 EDL933 # 1 157 1 157 577 312 100.0 2e-85 MHSTEVQAKPLFSWKALGWALLYFWFFSTLLQAIIYISGYSGTNGIRDSLLFSSLWLIPV FLFPKRIKIIAAVIGVVLWAASLAALCYYVIYGQEFSQSVLFVMFETNTNEASEYLSQYF SLKIVLIALAYTAVAVLLWTRLRPVYIPKPWRYVVSF Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:28:44 2011 Seq name: gi|257257146|gb|ACDX02000064.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont63.1, whole genome shotgun sequence Length of sequence - 511 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:28:45 2011 Seq name: gi|257257145|gb|ACDX02000065.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont64.1, whole genome shotgun sequence Length of sequence - 509 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 49 - 84 -0.7 1 1 Tu 1 . - CDS 105 - 509 377 ## COG3076 Uncharacterized protein conserved in bacteria Predicted protein(s) >gi|257257145|gb|ACDX02000065.1| GENE 1 105 - 509 377 134 aa, chain - ## HITS:1 COG:ECs5232 KEGG:ns NR:ns ## COG: ECs5232 COG3076 # Protein_GI_number: 15834486 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 2 134 6 138 138 178 99.0 3e-45 AKLEEQREETRLIIEELLEDGSDPDALYTIEHHLSADDLETLEKAAVEAFKLGYEVTDPE ELEVEDGDIVICCDILSECALNADLIDAQVEQLMTLAEKFDVEYDGWGTYFEDPNGEDGD DEDFVDEDDDGVRH Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:28:46 2011 Seq name: gi|257257144|gb|ACDX02000066.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont66.1, whole genome shotgun sequence Length of sequence - 504 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 18 - 76 1.1 1 1 Tu 1 . - CDS 97 - 327 139 ## - Prom 374 - 433 4.0 Predicted protein(s) >gi|257257144|gb|ACDX02000066.1| GENE 1 97 - 327 139 76 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLNIIFVDDLPVATERAQAAFRAICDRYGITCAITVKDTAEGFLAWAEPQNFSVALFLPT TILYSSSLNRSTAFSL Prediction of potential genes in microbial genomes Time: Sun Jul 17 00:28:52 2011 Seq name: gi|257257143|gb|ACDX02000067.1| Neisseria mucosa ATCC 25996 N_mucosa-1.0.2_Cont68.1, whole genome shotgun sequence Length of sequence - 500 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 427 677 ## COG3399 Uncharacterized protein conserved in bacteria Predicted protein(s) >gi|257257143|gb|ACDX02000067.1| GENE 1 2 - 427 677 141 aa, chain + ## HITS:1 COG:NMB0013 KEGG:ns NR:ns ## COG: NMB0013 COG3399 # Protein_GI_number: 15675961 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 1 141 9 149 149 178 82.0 2e-45 IIHLFCAIAFVGGVFFEMLVLSVMHTGRVSRESRREVERAMSHRAVRVMPPVVITLFISG IVMAFNRYLPFLSEPFATSLGTLLTLKILLAVSVLVHFAIAVVKMARHTLTVGWSKYIHA VVFSHMLFIVFFAKAMFYLSW