Prediction of potential genes in microbial genomes Time: Thu May 26 12:57:40 2011 Seq name: gi|289656366|gb|ADEA01000001.1| Neisseria sp. oral taxon 014 str. F0314 cont1.1, whole genome shotgun sequence Length of sequence - 160186 bp Number of predicted genes - 152, with homology - 145 Number of transcription units - 87, operones - 41 average op.length - 2.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 291 318 ## COG1555 DNA uptake protein and related DNA-binding proteins + Term 343 - 374 4.1 - Term 331 - 362 4.1 2 2 Tu 1 . - CDS 397 - 1200 963 ## COG4105 DNA uptake lipoprotein - Prom 1224 - 1283 4.5 + Prom 1000 - 1059 7.2 3 3 Op 1 11/0.083 + CDS 1199 - 2320 547 ## COG0564 Pseudouridylate synthases, 23S RNA-specific 4 3 Op 2 . + CDS 2369 - 3142 493 ## COG1496 Uncharacterized conserved protein + Prom 3144 - 3203 3.9 5 3 Op 3 . + CDS 3227 - 4918 2450 ## COG0277 FAD/FMN-containing dehydrogenases + Term 4946 - 4995 8.0 + Prom 4976 - 5035 5.8 6 4 Tu 1 . + CDS 5070 - 5432 432 ## NMCC_0939 hypothetical protein + Prom 5537 - 5596 3.1 7 5 Op 1 4/0.083 + CDS 5630 - 6178 949 ## COG2128 Uncharacterized conserved protein + Term 6217 - 6258 7.9 8 5 Op 2 . + CDS 6267 - 7355 1281 ## COG1960 Acyl-CoA dehydrogenases + Term 7374 - 7417 10.0 - TRNA 7475 - 7565 69.6 # Ser TGA 0 0 - TRNA 7577 - 7666 65.0 # Ser CGA 0 0 - TRNA 7691 - 7781 69.6 # Ser TGA 0 0 9 6 Tu 1 . - CDS 7862 - 8641 1250 ## COG3022 Uncharacterized protein conserved in bacteria - Prom 8669 - 8728 2.9 - Term 8694 - 8743 4.2 10 7 Tu 1 . - CDS 8756 - 9946 1889 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase - Prom 9970 - 10029 2.0 - Term 10001 - 10040 8.3 11 8 Op 1 2/0.292 - CDS 10068 - 10898 1255 ## COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases 12 8 Op 2 . - CDS 10991 - 11380 657 ## COG0251 Putative translation initiation inhibitor, yjgF family - Prom 11416 - 11475 2.1 13 9 Op 1 13/0.042 - CDS 11557 - 12732 1243 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases 14 9 Op 2 . - CDS 12784 - 13377 437 ## PROTEIN SUPPORTED gi|71274727|ref|ZP_00651015.1| Ham1-like protein 15 9 Op 3 . - CDS 13387 - 13617 284 ## NGO0222 hypothetical protein - Prom 13641 - 13700 2.6 - Term 13734 - 13773 6.7 16 10 Op 1 9/0.083 - CDS 13789 - 14922 1921 ## COG3317 Uncharacterized lipoprotein 17 10 Op 2 . - CDS 14939 - 15814 1434 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase - Prom 15946 - 16005 5.9 + Prom 15903 - 15962 7.9 18 11 Tu 1 . + CDS 16069 - 17544 316 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 + Term 17556 - 17604 12.1 - Term 17536 - 17583 10.1 19 12 Op 1 . - CDS 17620 - 18789 1473 ## COG1004 Predicted UDP-glucose 6-dehydrogenase 20 12 Op 2 . - CDS 18798 - 21101 1626 ## Asuc_0056 hypothetical protein 21 12 Op 3 3/0.125 - CDS 21148 - 23085 284 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 22 12 Op 4 25/0.000 - CDS 23119 - 24309 1201 ## COG0438 Glycosyltransferase 23 12 Op 5 4/0.083 - CDS 24325 - 25560 1041 ## COG0438 Glycosyltransferase 24 12 Op 6 . - CDS 25582 - 26772 1157 ## COG4671 Predicted glycosyl transferase - Prom 26793 - 26852 11.4 + Prom 27065 - 27124 10.6 25 13 Tu 1 . + CDS 27154 - 28284 1430 ## COG3203 Outer membrane protein (porin) + Term 28365 - 28420 16.5 + Prom 28617 - 28676 8.6 26 14 Op 1 . + CDS 28708 - 29244 635 ## DNO_0911 anaerobic ribonucleoside-triphosphate reductase activating protein (EC:1.97.1.4) 27 14 Op 2 . + CDS 29279 - 31060 2972 ## COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase + Prom 31091 - 31150 1.8 28 15 Op 1 . + CDS 31184 - 31675 394 ## NMO_1156 hypothetical protein + Term 31680 - 31731 12.2 + Prom 31683 - 31742 3.9 29 15 Op 2 . + CDS 31777 - 32265 546 ## NMC1253 hypothetical protein + Term 32298 - 32352 18.4 - Term 32289 - 32337 13.8 30 16 Tu 1 . - CDS 32368 - 32820 832 ## COG0756 dUTPase - Prom 32844 - 32903 7.0 + Prom 32844 - 32903 3.3 31 17 Op 1 . + CDS 32948 - 33580 929 ## COG0259 Pyridoxamine-phosphate oxidase + Prom 33612 - 33671 2.4 32 17 Op 2 . + CDS 33815 - 34861 1770 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases + Term 34869 - 34916 12.5 + Prom 35193 - 35252 4.0 33 18 Op 1 . + CDS 35365 - 36234 667 ## COG1858 Cytochrome c peroxidase 34 18 Op 2 . + CDS 36092 - 36568 761 ## COG1858 Cytochrome c peroxidase + Term 36577 - 36617 9.2 + Prom 36693 - 36752 4.5 35 19 Tu 1 . + CDS 36974 - 38875 2791 ## COG0422 Thiamine biosynthesis protein ThiC + Term 38905 - 38943 -0.1 - Term 38870 - 38908 10.2 36 20 Op 1 . - CDS 38931 - 39680 454 ## PROTEIN SUPPORTED gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 37 20 Op 2 5/0.083 - CDS 39741 - 40049 569 ## COG4541 Predicted membrane protein 38 20 Op 3 . - CDS 40046 - 40516 742 ## COG1296 Predicted branched-chain amino acid permease (azaleucine resistance) 39 20 Op 4 . - CDS 40559 - 40756 308 ## COG1296 Predicted branched-chain amino acid permease (azaleucine resistance) - Prom 40782 - 40841 5.1 + Prom 40741 - 40800 3.8 40 21 Op 1 23/0.000 + CDS 40935 - 41678 1314 ## COG0725 ABC-type molybdate transport system, periplasmic component + Term 41688 - 41745 16.0 + Prom 41692 - 41751 1.7 41 21 Op 2 6/0.083 + CDS 41810 - 42493 1168 ## COG4149 ABC-type molybdate transport system, permease component 42 21 Op 3 . + CDS 42483 - 43145 248 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 43166 - 43220 20.0 - Term 43215 - 43254 -0.9 43 22 Tu 1 . - CDS 43255 - 44382 1953 ## COG5008 Tfp pilus assembly protein, ATPase PilU - Prom 44417 - 44476 4.9 + Prom 44435 - 44494 5.4 44 23 Tu 1 . + CDS 44527 - 45228 760 ## COG0775 Nucleoside phosphorylase + Prom 45251 - 45310 5.3 45 24 Op 1 14/0.042 + CDS 45399 - 47192 2637 ## COG0481 Membrane GTPase LepA 46 24 Op 2 . + CDS 47192 - 48178 1134 ## COG0681 Signal peptidase I 47 24 Op 3 . + CDS 48207 - 50918 1041 ## COG0612 Predicted Zn-dependent peptidases + Term 50944 - 51001 19.6 + Prom 50946 - 51005 4.8 48 25 Tu 1 . + CDS 51036 - 53909 4048 ## COG0178 Excinuclease ATPase subunit + Prom 54037 - 54096 7.2 49 26 Tu 1 . + CDS 54129 - 54614 335 ## gi|298368383|ref|ZP_06979701.1| conserved hypothetical protein + Term 54657 - 54697 2.5 + Prom 55483 - 55542 1.7 50 27 Tu 1 . + CDS 55724 - 55852 131 ## gi|225075224|ref|ZP_03718423.1| hypothetical protein NEIFLAOT_00224 51 28 Op 1 11/0.083 + CDS 56044 - 57096 1350 ## COG4174 ABC-type uncharacterized transport system, permease component 52 28 Op 2 11/0.083 + CDS 57124 - 58170 1048 ## COG4239 ABC-type uncharacterized transport system, permease component 53 28 Op 3 . + CDS 58207 - 59748 502 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 54 28 Op 4 . + CDS 59789 - 59902 67 ## 55 28 Op 5 . + CDS 59899 - 60231 507 ## COG0526 Thiol-disulfide isomerase and thioredoxins + Term 60243 - 60295 16.2 + Prom 60259 - 60318 4.4 56 29 Tu 1 . + CDS 60525 - 61844 1703 ## COG2733 Predicted membrane protein - Term 61885 - 61941 15.6 57 30 Op 1 11/0.083 - CDS 61952 - 62227 451 ## COG2919 Septum formation initiator 58 30 Op 2 . - CDS 62250 - 63536 1918 ## COG0148 Enolase - Prom 63675 - 63734 4.5 - Term 63818 - 63881 11.6 59 31 Tu 1 . - CDS 63884 - 65347 2527 ## COG0516 IMP dehydrogenase/GMP reductase - Prom 65459 - 65518 6.3 + Prom 65415 - 65474 7.2 60 32 Tu 1 . + CDS 65555 - 65989 522 ## NMCC_1263 hypothetical protein + Term 65999 - 66058 12.2 - Term 65994 - 66039 12.9 61 33 Tu 1 . - CDS 66062 - 67405 2310 ## COG2704 Anaerobic C4-dicarboxylate transporter - Prom 67540 - 67599 5.7 - Term 67580 - 67643 23.2 62 34 Op 1 . - CDS 67676 - 68551 1428 ## NMA1460 putative integral membrane protein - Prom 68580 - 68639 3.1 - Term 68565 - 68612 9.1 63 34 Op 2 2/0.292 - CDS 68642 - 69004 669 ## COG3671 Predicted membrane protein 64 34 Op 3 . - CDS 69033 - 69518 620 ## COG2606 Uncharacterized conserved protein - Prom 69556 - 69615 2.0 + Prom 69405 - 69464 3.4 65 35 Op 1 2/0.292 + CDS 69663 - 70016 466 ## COG0251 Putative translation initiation inhibitor, yjgF family + Term 70030 - 70066 0.2 + Prom 70018 - 70077 5.4 66 35 Op 2 . + CDS 70114 - 70974 1320 ## COG0354 Predicted aminomethyltransferase related to GcvT + Term 71012 - 71055 9.1 - Term 71000 - 71041 8.7 67 36 Tu 1 . - CDS 71056 - 72174 1274 ## COG2890 Methylase of polypeptide chain release factors - Prom 72240 - 72299 3.0 + Prom 72133 - 72192 6.2 68 37 Tu 1 . + CDS 72301 - 72546 125 ## gi|298368400|ref|ZP_06979718.1| hypothetical protein HMPREF9016_00063 + Term 72569 - 72617 5.1 + Prom 72590 - 72649 11.3 69 38 Op 1 . + CDS 72765 - 74558 2791 ## COG0119 Isopropylmalate/homocitrate/citramalate synthases + Term 74594 - 74644 13.4 + Prom 74616 - 74675 6.7 70 38 Op 2 . + CDS 74704 - 79923 5814 ## COG0514 Superfamily II DNA helicase + Term 79999 - 80054 17.0 - Term 79989 - 80039 12.7 71 39 Op 1 . - CDS 80089 - 80259 173 ## gi|298368403|ref|ZP_06979721.1| hypothetical protein HMPREF9016_00066 72 39 Op 2 . - CDS 80483 - 81541 1819 ## COG1613 ABC-type sulfate transport system, periplasmic component - Prom 81569 - 81628 2.4 - Term 81702 - 81735 1.0 73 40 Tu 1 . - CDS 81753 - 82949 2175 ## COG0282 Acetate kinase - Prom 83026 - 83085 3.3 + Prom 83019 - 83078 3.1 74 41 Op 1 . + CDS 83207 - 83521 427 ## NMC1446 hypothetical protein 75 41 Op 2 2/0.292 + CDS 83522 - 83713 202 ## COG3197 Uncharacterized protein, possibly involved in nitrogen fixation 76 41 Op 3 . + CDS 83694 - 85010 1841 ## COG0477 Permeases of the major facilitator superfamily + Term 85027 - 85088 4.8 + Prom 85047 - 85106 2.0 77 42 Op 1 4/0.083 + CDS 85132 - 86121 1091 ## COG0470 ATPase involved in DNA replication 78 42 Op 2 4/0.083 + CDS 86118 - 86468 564 ## COG3215 Tfp pilus assembly protein PilZ 79 42 Op 3 2/0.292 + CDS 86483 - 87256 930 ## COG0084 Mg-dependent DNase 80 42 Op 4 . + CDS 87313 - 87564 434 ## COG3042 Putative hemolysin + Prom 87632 - 87691 3.7 81 42 Op 5 . + CDS 87717 - 88391 853 ## COG2836 Uncharacterized conserved protein + Term 88412 - 88458 15.0 82 43 Op 1 2/0.292 - CDS 88462 - 89268 1015 ## COG0730 Predicted permeases 83 43 Op 2 . - CDS 89272 - 90051 1136 ## COG1183 Phosphatidylserine synthase - Term 90205 - 90236 2.5 84 44 Tu 1 . - CDS 90254 - 90763 880 ## COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family - Term 90804 - 90853 12.1 85 45 Tu 1 . - CDS 90871 - 92286 2157 ## COG0471 Di- and tricarboxylate transporters - Prom 92402 - 92461 7.2 - Term 92512 - 92563 16.4 86 46 Op 1 . - CDS 92580 - 93581 1709 ## COG0113 Delta-aminolevulinic acid dehydratase - Term 93592 - 93644 7.0 87 46 Op 2 . - CDS 93710 - 94432 1144 ## COG3210 Large exoproteins involved in heme utilization or adhesion - Prom 94457 - 94516 3.8 88 47 Tu 1 . - CDS 94578 - 95081 859 ## COG1076 DnaJ-domain-containing proteins 1 89 48 Op 1 . - CDS 95183 - 95503 654 ## COG0316 Uncharacterized conserved protein 90 48 Op 2 . - CDS 95514 - 95762 414 ## D11S_0049 hypothetical protein 91 48 Op 3 . - CDS 95835 - 96221 706 ## COG0822 NifU homolog involved in Fe-S cluster formation 92 48 Op 4 . - CDS 96291 - 96419 327 ## - Prom 96471 - 96530 2.1 93 49 Tu 1 . - CDS 96538 - 97356 247 ## SUN_1444 hypothetical protein - Prom 97379 - 97438 4.1 - Term 97389 - 97425 1.1 94 50 Op 1 13/0.042 - CDS 97449 - 98663 2139 ## COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 95 50 Op 2 . - CDS 98696 - 99142 687 ## COG1959 Predicted transcriptional regulator - Prom 99318 - 99377 6.0 + Prom 99336 - 99395 5.1 96 51 Tu 1 . + CDS 99527 - 100699 1433 ## COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases + Term 100784 - 100821 9.1 + Prom 100857 - 100916 4.1 97 52 Op 1 4/0.083 + CDS 101033 - 102184 1364 ## COG3705 ATP phosphoribosyltransferase involved in histidine biosynthesis 98 52 Op 2 . + CDS 102212 - 103510 1572 ## COG0104 Adenylosuccinate synthase + Term 103542 - 103582 4.1 + Prom 103755 - 103814 7.2 99 53 Op 1 . + CDS 103869 - 106154 3265 ## COG1882 Pyruvate-formate lyase + Term 106173 - 106208 6.0 100 53 Op 2 . + CDS 106289 - 107098 1096 ## COG1180 Pyruvate-formate lyase-activating enzyme + Term 107196 - 107258 24.2 - Term 107480 - 107530 14.3 101 54 Tu 1 . - CDS 107547 - 109523 2567 ## COG1629 Outer membrane receptor proteins, mostly Fe transport - Prom 109573 - 109632 8.4 - Term 109761 - 109800 10.0 102 55 Op 1 17/0.000 - CDS 109818 - 110891 1661 ## COG1118 ABC-type sulfate/molybdate transport systems, ATPase component 103 55 Op 2 . - CDS 110888 - 111748 1444 ## COG4208 ABC-type sulfate transport system, permease component - Prom 111811 - 111870 2.0 + Prom 111729 - 111788 2.2 104 56 Tu 1 . + CDS 111854 - 111943 103 ## 105 57 Tu 1 . - CDS 111936 - 112055 62 ## - Prom 112075 - 112134 4.7 106 58 Tu 1 . - CDS 112235 - 113071 1164 ## COG0555 ABC-type sulfate transport system, permease component - Prom 113158 - 113217 3.2 - Term 113230 - 113279 7.7 107 59 Tu 1 . - CDS 113308 - 114816 2462 ## COG0248 Exopolyphosphatase - Prom 114919 - 114978 4.0 + Prom 114878 - 114937 6.2 108 60 Tu 1 . + CDS 114996 - 115625 808 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) + Prom 115627 - 115686 4.3 109 61 Op 1 4/0.083 + CDS 115796 - 117178 1766 ## COG0477 Permeases of the major facilitator superfamily 110 61 Op 2 . + CDS 117184 - 117714 767 ## COG0629 Single-stranded DNA-binding protein + Term 117760 - 117800 5.1 - Term 117737 - 117796 -0.1 111 62 Op 1 . - CDS 118018 - 118158 98 ## 112 62 Op 2 . - CDS 118223 - 118948 232 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 - Prom 119063 - 119122 4.4 + Prom 119033 - 119092 4.8 113 63 Op 1 . + CDS 119115 - 119900 702 ## COG3384 Uncharacterized conserved protein 114 63 Op 2 . + CDS 119902 - 120099 150 ## gi|298368442|ref|ZP_06979760.1| hypothetical protein HMPREF9016_00105 115 63 Op 3 7/0.083 + CDS 120030 - 120329 247 ## COG4456 Virulence-associated protein and related proteins 116 63 Op 4 . + CDS 120326 - 120628 392 ## COG1487 Predicted nucleic acid-binding protein, contains PIN domain + Prom 120745 - 120804 9.6 117 64 Op 1 . + CDS 120856 - 125838 1814 ## COG1112 Superfamily I DNA and RNA helicases and helicase subunits 118 64 Op 2 . + CDS 125835 - 127217 836 ## PBPRA1585 hypothetical protein + Term 127423 - 127476 -0.9 119 65 Tu 1 . + CDS 128032 - 128508 861 ## COG0782 Transcription elongation factor + Term 128522 - 128576 2.1 120 66 Tu 1 . - CDS 128770 - 129054 239 ## PROTEIN SUPPORTED gi|56478165|ref|YP_159754.1| RNA-binding protein - Prom 129303 - 129362 3.8 + Prom 129014 - 129073 2.9 121 67 Op 1 13/0.042 + CDS 129195 - 129815 532 ## COG0293 23S rRNA methylase 122 67 Op 2 . + CDS 129862 - 131838 1549 ## PROTEIN SUPPORTED gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 + Term 131851 - 131893 6.1 - Term 131888 - 131928 12.2 123 68 Op 1 . - CDS 131993 - 132475 582 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - Prom 132560 - 132619 4.2 124 68 Op 2 . - CDS 132639 - 133775 1364 ## COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) - Prom 133950 - 134009 4.2 - Term 133894 - 133934 0.3 125 69 Tu 1 . - CDS 134070 - 134270 148 ## COG2827 Predicted endonuclease containing a URI domain - Prom 134341 - 134400 2.5 126 70 Op 1 . - CDS 134410 - 134673 257 ## gi|298368452|ref|ZP_06979770.1| conserved hypothetical protein 127 70 Op 2 . - CDS 134728 - 136203 2299 ## COG0147 Anthranilate/para-aminobenzoate synthases component I - Prom 136337 - 136396 5.8 - Term 136377 - 136423 7.4 128 71 Tu 1 . - CDS 136432 - 136842 544 ## NMC1014 hypothetical protein - Prom 136870 - 136929 3.2 + Prom 136904 - 136963 2.4 129 72 Op 1 . + CDS 136984 - 137763 669 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 130 72 Op 2 . + CDS 137780 - 138394 776 ## COG2840 Uncharacterized protein conserved in bacteria + Term 138410 - 138462 20.1 131 73 Tu 1 13/0.042 + CDS 138933 - 141596 3980 ## COG2609 Pyruvate dehydrogenase complex, dehydrogenase (E1) component 132 74 Op 1 30/0.000 + CDS 141727 - 143328 2044 ## COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes 133 74 Op 2 . + CDS 143416 - 145203 678 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 + Term 145254 - 145299 14.6 134 75 Tu 1 . - CDS 145309 - 146229 1153 ## COG0564 Pseudouridylate synthases, 23S RNA-specific - Prom 146407 - 146466 2.3 + Prom 146200 - 146259 4.7 135 76 Op 1 12/0.042 + CDS 146375 - 147670 1525 ## COG0124 Histidyl-tRNA synthetase 136 76 Op 2 3/0.125 + CDS 147671 - 148300 989 ## COG2976 Uncharacterized protein conserved in bacteria + Term 148330 - 148368 9.3 + Prom 148850 - 148909 4.0 137 77 Tu 1 1/0.292 + CDS 148987 - 150444 2059 ## COG1160 Predicted GTPases + Prom 150578 - 150637 4.5 138 78 Tu 1 2/0.292 + CDS 150687 - 150977 376 ## COG1923 Uncharacterized host factor I protein + Term 150993 - 151031 7.0 + Prom 151009 - 151068 2.9 139 79 Op 1 2/0.292 + CDS 151088 - 151648 577 ## COG0500 SAM-dependent methyltransferases 140 79 Op 2 2/0.292 + CDS 151699 - 152070 428 ## COG3094 Uncharacterized protein conserved in bacteria 141 79 Op 3 1/0.292 + CDS 152093 - 152593 524 ## COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase + Term 152595 - 152659 3.5 + Prom 152604 - 152663 2.1 142 80 Op 1 . + CDS 152684 - 153322 984 ## COG1428 Deoxynucleoside kinases 143 80 Op 2 2/0.292 + CDS 153336 - 153773 691 ## COG1225 Peroxiredoxin 144 80 Op 3 . + CDS 153849 - 154721 919 ## COG4974 Site-specific recombinase XerD + Prom 154728 - 154787 3.0 145 81 Tu 1 . + CDS 154871 - 155299 542 ## COG2005 N-terminal domain of molybdenum-binding protein + Term 155466 - 155503 0.7 + Prom 155346 - 155405 9.0 146 82 Tu 1 . + CDS 155562 - 155768 331 ## COG2906 Bacterioferritin-associated ferredoxin + Term 155785 - 155831 12.4 + Prom 155825 - 155884 7.0 147 83 Op 1 . + CDS 156035 - 157363 1683 ## COG1114 Branched-chain amino acid permeases + Term 157373 - 157427 16.0 148 83 Op 2 . + CDS 157438 - 157680 286 ## COG0526 Thiol-disulfide isomerase and thioredoxins + Term 157713 - 157758 12.1 149 84 Tu 1 . - CDS 157792 - 157890 162 ## - Prom 158024 - 158083 6.6 - Term 158227 - 158272 14.6 150 85 Tu 1 . - CDS 158289 - 159152 752 ## COG1091 dTDP-4-dehydrorhamnose reductase - Prom 159181 - 159240 4.1 151 86 Tu 1 . + CDS 159879 - 160184 255 ## PROTEIN SUPPORTED gi|167042352|gb|ABZ07080.1| putative ribosomal protein L31e 152 87 Tu 1 . - CDS 159941 - 160186 214 ## Predicted protein(s) >gi|289656366|gb|ADEA01000001.1| GENE 1 1 - 291 318 96 aa, chain + ## HITS:1 COG:NMB2017 KEGG:ns NR:ns ## COG: NMB2017 COG1555 # Protein_GI_number: 15677842 # Func_class: L Replication, recombination and repair # Function: DNA uptake protein and related DNA-binding proteins # Organism: Neisseria meningitidis MC58 # 1 95 50 148 148 96 58.0 1e-20 MKHILFGILALLAVPLALAAVNINTATAAELEALPGIGPAKAKAIVAYRQQNGQFKTVED LKKVKGIGEGIFSKLKDEASVAPPAAKKAVPAVKQQ >gi|289656366|gb|ADEA01000001.1| GENE 2 397 - 1200 963 267 aa, chain - ## HITS:1 COG:NMA0907 KEGG:ns NR:ns ## COG: NMA0907 COG4105 # Protein_GI_number: 15793873 # Func_class: R General function prediction only # Function: DNA uptake lipoprotein # Organism: Neisseria meningitidis Z2491 # 1 266 1 266 267 426 82.0 1e-119 MKKILLVVSLSLVLSACASKGTVDKDAQITQDWNVEKLYAEAQDELNSNNYTRAIKLYEL LESRFPNGRYAQQSQLDTAYAYYKDDEPEKALAAIERFQRHHPQHPNMDYALYLKGLVLF NEDQSFLNKLASQDWSDRDPKANRDAYQAFSQLVQLYPNSKYAPDATERMTKLVDALGGN EIAIARYYMKRGAYLAAINRAQKIVEQYQNTRYVEESLAMMELAYKKLGKPQLAADSRRI LAGNFPASPYLQKPWRPDDMPWWRYWR >gi|289656366|gb|ADEA01000001.1| GENE 3 1199 - 2320 547 373 aa, chain + ## HITS:1 COG:NMB0704 KEGG:ns NR:ns ## COG: NMB0704 COG0564 # Protein_GI_number: 15676602 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthases, 23S RNA-specific # Organism: Neisseria meningitidis MC58 # 1 373 1 374 374 602 82.0 1e-172 MQNTSFDNEADYNDDLDFAAALEAESCVKLTVPLDMAGLRLDSALAKLMPDYSRSRLATW IKEDLVIVNGKPARPKEKLIGGEFITVTVRSSEESLAFLPEKMDLDIVYEDDTVIVVNKS AGLVVHPAAGNWSGTLLNGLLAHCPELGQIPRAGIVHRLDKETSGLMVVAKTLPAQNSLV RQLQERTVKRIYRAVANGIVPFDGKIETLIGRDPHNRLKMAVVKYGGKPAITHVKVLERY PAHSYIECSLETGRTHQIRVHMREANHPLAADPIYGNPRHPCSEMVKEAVKALGRQALHA YRLSFLHPKTQKAVSFEAAIPEDMYHLLSVLRLEAGLDSSLSHEEEWFNKLNEEDDGDWD EDDYDVEVVYTRD >gi|289656366|gb|ADEA01000001.1| GENE 4 2369 - 3142 493 257 aa, chain + ## HITS:1 COG:NMA0911 KEGG:ns NR:ns ## COG: NMA0911 COG1496 # Protein_GI_number: 15793876 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 1 255 1 255 259 363 70.0 1e-100 MKTLSESLGIAAVKSNFLHADWPAPDNVKTLLTTRNGGVSNGVYRSLNVGIHVGDNPEHV THNREIVQQQISVPVAYLNQIHSNKVVLATDALERLTDADASVDNTGRAACASMTADCLP VLFCDKAGTVVAAAHAGWKGLAGGILQNTIRAMNVAPIEIMAYLGPAIGPDAFEVGRDVV DVFYQSMPESESAFESIGGGKFLANIYALARMILQREGVSMIYGGDYCTVLERNTFFSYR REGQTGRMVSVVWLEKQ >gi|289656366|gb|ADEA01000001.1| GENE 5 3227 - 4918 2450 563 aa, chain + ## HITS:1 COG:NMB0997 KEGG:ns NR:ns ## COG: NMB0997 COG0277 # Protein_GI_number: 15676888 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Neisseria meningitidis MC58 # 1 563 1 563 563 1151 96.0 0 MTVSQLISSLTQTVGEKYIITDPAKTEQYRQGYRFGEGKALAVVRPGTILEMWKILQACV EADVIVITQAANTGLTGGSTPDGNDYDRDIVIVNTMRMNIIQTINNNEQVVCLPGSTLNQ LELLLKPLGREPHSVIGSSCIGASVLGGVCNNSGGALVQRGPAYTEMALFAQINEEGKLE LVNHLGIDLGDTPEEILTNLQGHHYQRKDITQDAGKGHDHAYCDHVRQVDEPTAARFNAD PARHYEASGCAGKLMVFAVRLDTFPQEKQTAVFYIGTNDINELTDIRRAALGEFENLPVS GEYIHRDAFDIADVYGKDTFYVIKKFGTHQLPKLFDFKAKVDRFGKKVSFLPKHFSDKAM QFVSKYLPDHLPKSMRDYRDKYEHHLILKMGGKGVDEARAFLKEYFAHHGGAFFECNAEE TQAAMLHRFAVASAAIRYRAVHDDEVEDLVALDIALRRDDRDWFEKLPSEIDNKIIHKLY YGHFMCHVFHQDYIIKKGNDCMALEHEMLHLLDQRGAQYPAEHNVGHLYEAKPALKQFYR KLDPTNSFNPGIGKTSKKKNWAK >gi|289656366|gb|ADEA01000001.1| GENE 6 5070 - 5432 432 120 aa, chain + ## HITS:1 COG:no KEGG:NMCC_0939 NR:ns ## KEGG: NMCC_0939 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_053442 # Pathway: not_defined # 1 113 1 117 123 110 45.0 2e-23 MKTYKIFKNPTGQYEAVKQGWSWPAFFFAGIWACVKKMWGLGIGIIIVFIILNVMAGDNE VMNVLVSILSLGVGIVLGMQGNKLREGNLKKRGYQEVPQVIQAGNPEAAVAQYISEYEKN >gi|289656366|gb|ADEA01000001.1| GENE 7 5630 - 6178 949 182 aa, chain + ## HITS:1 COG:NMB0995 KEGG:ns NR:ns ## COG: NMB0995 COG2128 # Protein_GI_number: 15676886 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis MC58 # 1 182 46 227 227 296 93.0 2e-80 MARLTVHTVETAPEAAKPRVEAALKNNGFIPNLIGVLANAPEALAFYQEVGKLNAANSLT AGEVEVIQIIAARTNECGFCVAGHTKLATLKKLLSEQSIKAARALAAGEFDDAKLGALAA FTQAVMSKKGAVSDAELKAFFDAGYNQQQAVEVVMGVALATLCNYVNNVAQTEINPELQA FA >gi|289656366|gb|ADEA01000001.1| GENE 8 6267 - 7355 1281 362 aa, chain + ## HITS:1 COG:NMA1202 KEGG:ns NR:ns ## COG: NMA1202 COG1960 # Protein_GI_number: 15794146 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Neisseria meningitidis Z2491 # 1 361 1 361 363 575 79.0 1e-164 MSRETLLNNVTELVKNQLKPLVEDIDRKGLYPEDFLRNLGAIGGFASVGSAEEGGTGYGL ATQIAVLREVAKECGATSFSAWCQAACAWYLHRSPNPEVKEKYLAEILQGGILAGTGMSN TVKHLAEIEKHNLQAVRADGGYIVNGTLPWVSNIGEEHIWANTAQTDGGYVMFITGGEWD GVSLQNCPEFCALEGTRTYGLTFKDVFIEDEDVIAAPEQFAAYIQSIKAGFILLQIGIGA GVIDGSLEVIREADAAHAEANRYLDDDYDSLKTKLDGAWAETERLADLAWNNRPDNLATL KLRAAASELALAASQSAALHAGAKGYLMRSPAQRRLREAMFVAIVTPALKHLRKEIAAWE GN >gi|289656366|gb|ADEA01000001.1| GENE 9 7862 - 8641 1250 259 aa, chain - ## HITS:1 COG:NMB0895 KEGG:ns NR:ns ## COG: NMB0895 COG3022 # Protein_GI_number: 15676791 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 1 259 1 259 259 428 81.0 1e-120 MFFVLSPAKNLNEKDPAPVGRFTQPDLLAESEILMETLRGLAPQQIAELMHVSDKIALLN AERNAAWHTPFTPDNAKQAVFMFNGDVYEGLDAASLTPEQTDYLQQHVRLLSGLYGVLRP LDLMQPYRLEMGTPLANPRGKNLYEFWGGRITGLLNDTLAQAGASVLVNLASQEYFKSVD TRKLNARLITPVFKDEKNGKYKIISFYAKRARGLMVRYAAEHGITDPEQLKGFDCEGYRF NEAASGANEWVFLREEQSK >gi|289656366|gb|ADEA01000001.1| GENE 10 8756 - 9946 1889 396 aa, chain - ## HITS:1 COG:NMB0894 KEGG:ns NR:ns ## COG: NMB0894 COG0436 # Protein_GI_number: 15676790 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Neisseria meningitidis MC58 # 1 395 1 395 395 667 79.0 0 MNPLLNQLQPYPFARLREAMRDWTTPAGLQPVHLQIGEPKHATPKIITDALAASLAELSK YPLTAGLPELRQACANWAARRYQGVELNPDTEVLPVLGSREALFSFAQALLNPVSDGLKP VVVSPNPFYQIYEGAALLGGGEIRFANCPAPSFKPDWRSIGENFWRRTQLVFVCSPNNPS GSVLQLDDWKELFDLQDKYGFTIASDECYSEIYFDGEKPIGGLEAAHKLGRGNKGLVMFT SLSKRSSVPGLRSGFVAGDAEILSRFLLYRTYHGSAMGIPVQHASIAAWNDEQHVVENRR LYQEKFDRVLPILQQAFDVRRPDASFYIWLKVPGGDDLAFAKKLWQDAAIQVLPGRFLAR DTEYGNPGEGYVRIALVADVDTCVKAAETIVALYQK >gi|289656366|gb|ADEA01000001.1| GENE 11 10068 - 10898 1255 276 aa, chain - ## HITS:1 COG:NMA0860 KEGG:ns NR:ns ## COG: NMA0860 COG0639 # Protein_GI_number: 15793830 # Func_class: T Signal transduction mechanisms # Function: Diadenosine tetraphosphatase and related serine/threonine protein phosphatases # Organism: Neisseria meningitidis Z2491 # 1 272 1 272 276 450 77.0 1e-126 MAHYAIGDIQGCFDELTALLDKISFNHGTDTLWLTGDIVNRGPKSLESLQFAMRHESSVQ IILGNHDLHLLAVGFGHGSVKRSDTITPILKHADSKKMLDWLRAQPLMISGEKHVMVHAG ILPQWSIAKAETLAREAEAELKGKKAEKFFSKMYGNKPTAWSDHLKGYDRLRMIVNVFTR MRALTLKNELDYDYKSTLDQMPPSLRPWFKAPDRKHLSHTIVFGHWSSLGYMNCDRIISL DTGALWGGELTAIDLASNQITQVPSANGLDWKKPLK >gi|289656366|gb|ADEA01000001.1| GENE 12 10991 - 11380 657 129 aa, chain - ## HITS:1 COG:NMA0861 KEGG:ns NR:ns ## COG: NMA0861 COG0251 # Protein_GI_number: 15793831 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Neisseria meningitidis Z2491 # 1 129 1 129 129 205 96.0 2e-53 MSKTIIHTDKAPAAIGAYSQAVRAGDTVYMSGQIPLDPATMTVVGNGDFRAEARQVFKNL QAVAEAAGGTLADIVKLNAYLTDLADFAVFNEVMAEFIQEPFPARAAVGVAALPKGVQVE AEAVLVLTA >gi|289656366|gb|ADEA01000001.1| GENE 13 11557 - 12732 1243 391 aa, chain - ## HITS:1 COG:NMB0665 KEGG:ns NR:ns ## COG: NMB0665 COG0635 # Protein_GI_number: 15676563 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Neisseria meningitidis MC58 # 1 391 1 391 391 772 95.0 0 MTQITFPQAGQLTALPPLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQL ELPNIWGRPVETIFFGGGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEK FQGFKDAGITRLSIGVQSFNDGMLARLGRVHNGKEALTAIATALKLFDKVNIDLMYALPN QTVQTALDDVQTAIATGATHISAYHLTMEPNTPFGHTPPKCLPQDEAALDIEDAVHGALE GAGFIHYETSAFAKPAMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDY LALMQSQPSEAVERKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGVPAAKIMAQIETA RQKGLLKTNPTVFRPTERGRLFLNDLLQCFL >gi|289656366|gb|ADEA01000001.1| GENE 14 12784 - 13377 437 197 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|71274727|ref|ZP_00651015.1| Ham1-like protein [Xylella fastidiosa Dixon] # 1 190 1 191 200 172 47 7e-42 MFEKIVLASGNTGKLKEFSRLFADLNIEVLPQSQFDTPECPEPYHTFVENALAKALHAAK HSGLPALADDSGICTAALNGAPGVLSARYAGANPKSDTANNKRLSDDLADKADKSCYYVC VLVFVRHENDPQPIIAEGIWRGQWQTEAAGTHGFGYDPHFYLPEHNCTAAELAPEIKNAE SHRGQALRELLRKIEAL >gi|289656366|gb|ADEA01000001.1| GENE 15 13387 - 13617 284 76 aa, chain - ## HITS:1 COG:no KEGG:NGO0222 NR:ns ## KEGG: NGO0222 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae # Pathway: not_defined # 1 63 1 63 77 64 63.0 1e-09 MDKRKAYLLLTALFTLIFMALILLGSYLLSIHSKQYGLAAFLFAFAAVFGQIGSLALYIR HKARAQIMRAQQTESR >gi|289656366|gb|ADEA01000001.1| GENE 16 13789 - 14922 1921 377 aa, chain - ## HITS:1 COG:NMB0928 KEGG:ns NR:ns ## COG: NMB0928 COG3317 # Protein_GI_number: 15676822 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized lipoprotein # Organism: Neisseria meningitidis MC58 # 1 377 24 398 398 539 73.0 1e-153 MTNIKPIVLTLALISLTACSGSKKDQPKLDYQTQNRKIVNLEVPPDLTNPDQGNLYQIPA GSGAVRASDLKGRNNGVQQPANQAVLKSVKGVRLERDGSQRWLVVDGKSPAELWPLLKVF WQENGFDIKSEEPAIGQMETEWAENRAKIPQDSLRRLFAKVGLGGIYSTSERDKFIIRVE QGKNGTADVFFAHKGMQEVYGDKKKDTTVWQPRPNDPNLEAAFLARFMQYLGVDAKQAEN ALGQSINAPRSAGDLAKVDNGTLLLNGDYGRNWRRTALALDRIGLTVLGQNAERHAFLVQ QAPAESEAVTNKKTGLFKRWFGKDKKQNAQAAARPEMIVYVEPVNGGARISLLNKDGSSY KGSDAPTLLGRLHNELR >gi|289656366|gb|ADEA01000001.1| GENE 17 14939 - 15814 1434 291 aa, chain - ## HITS:1 COG:NMB0929 KEGG:ns NR:ns ## COG: NMB0929 COG0329 # Protein_GI_number: 15676823 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Neisseria meningitidis MC58 # 1 291 1 291 291 486 84.0 1e-137 MLKGSLVALITPMNQDGSIHYEQLRNLIDWHINNGTDGIVAVGTTGESATLSVEEHLSVI EETVKHVGKRIPVIAGTGANNTAEAIALSQAAERLGADYTLSVVPYYNKPSQEGIYRHFK AIAEATSIPMIVYNVPGRTVVGMSNETILRLAEIPNIVGVKEASGNIGSNIELINRVPEG FAVLSGDDPTGLAFMLCGGHGVITVAANVAPKLFADMCHAALAGDIATARRLNGRLIPIY NVMFCEPSPAAPKWGASLLGKCTPHVRLPLIELTEAGQVKVRAALETAQQI >gi|289656366|gb|ADEA01000001.1| GENE 18 16069 - 17544 316 491 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 76 476 27 421 447 126 28 7e-28 MLRPDKRYTIPITFFTVLLHSFITFGGVMTGVAGKKADSPDLVYGLEDKPPFGNALLSAI THLLAIFVPMITPALIVGGALELPVEMTAYLVSMAMVASGVGTYLQVNRFGPVGSGMLSI QSVNFSFVTVMIALGAGMKEGGLTKDAMISMLLGVSFVGAFLVCFSAWLLPYLKKVITPT VSGVVVMLIGLSLVHVGITDFGGGFGAKANGTFGSMENLGLASLVLLIVLIFNCMKNPLL RMSGIAVGLIVGYIVALFLGKVDFSALQNLPLVTLPVPFKYGFAFDWHAFIVAGAIFLLS VFEAVGDLTATAMVSDQPIEGEEYTKRLRGGVLADGLVSVIATALGSLPLTTFAQNNGVI QMTGVASRHVGKYIAVILVLLGLFPVVGRAFTTIPSPVLGGAMVLMFGLIAIAGVRILVS HGIRRREAVIAATSVGLGLGVAFEPEVFKNLPVLFQNSISAGGITAVVLNLLLPEDKSDK VVKVDTDGLEH >gi|289656366|gb|ADEA01000001.1| GENE 19 17620 - 18789 1473 389 aa, chain - ## HITS:1 COG:ugd KEGG:ns NR:ns ## COG: ugd COG1004 # Protein_GI_number: 16129969 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted UDP-glucose 6-dehydrogenase # Organism: Escherichia coli K12 # 1 388 1 388 388 498 62.0 1e-141 MKITVVGAGYVGLSNAVLFAQRHEVKLLDISPEKTNLINRKISPIQDAEISEYLATKPLN LHATTHADEVYADAEYIIIATPTDYDPETNYFDTSSVESVLETALANNDRAYLIIKSTIP VGFTVKMREKFNTDRIIFSPEFLRESKALHDNLYPSRIVVGDTNPAAERFAEALRDCSLV PDAPIILTNPTEAESIKLFSNTYLALRVAFFNELDSFAAAFNLDSRHIIDGVSADPRIGT HYNNPSFGYGGYCLPKDTKQLLANYETVPQNLIGAIVESNSTRKDFITKDVLAKKPSVVG VYRLTMKSGSDNFRSSSIQGVMKRIKEQGVPVIVYEPKYKEDEFFGSAVIKDLAEFKQRA DIILANRRNDDLSDVGDKVYTRDLKGNDF >gi|289656366|gb|ADEA01000001.1| GENE 20 18798 - 21101 1626 767 aa, chain - ## HITS:1 COG:no KEGG:Asuc_0056 NR:ns ## KEGG: Asuc_0056 # Name: not_defined # Def: hypothetical protein # Organism: A.succinogenes # Pathway: not_defined # 1 763 1 769 772 900 58.0 0 MLTEADKKIISNDPALPGLAALLDTELLLAKLRAIPALCTVEKAEIEYLRYKPANSCACT VRIRLADGSSRYYYAKALTKERFKESWNKPSRQKLVQAGHPQAPLAVFDSHIMLLHPAHD RGIGHLKWLIDQAERRHLFKACSLPPLQDYDALEIDILRYKPERRLVARISKDRQPLAVI RCANPDEFTKMLMGNAFGVAQGGVHLLGADGANRTLATNWQKGRSLCPEEGEPPTADLVR QLARQVTRIHHAGYKHPIRYTIEDEAKSLKGVINTFKHILPEQTEWFVGLVERVEKGLAS VPEHFALIHGDFSLDQVIRRENKLGETRLHILDWDRSAYGNPLMDLATFQARLELQVIEG ILPRRRADEILDTFLNTYRKKSGTSLDGLYWFTASAMLRLGAEPFRKRDPRWEQCVLQLL QRIEEILAKTDDPYMPTAENDTCFSEDSPLITLLDVPKMQALLHDEKILPAHEHIQSAVL CRYKIRRRALVDYQTDTGHLIGKYRAKGLDERSYLIQQKLWESGFDTQAQTSVPETAGKL PALNTWFQYKVNGQNVGNILMPQNGRLAFLGQAVARAINALHRSRTAQELELPRWTQESE LEILRDRLTKAQTTLPQWAKRIANVLGRCETLAQHLSETPFVTVHRDFYQDQILERYGRP GHIVLLDFDLLCQGHAALDAGNYIAHIQELALRLYGGIDALKAHEDAFLRQFLAGSETAK RKEVDIYTTLSLARHIYISTLFDNRKHTTETLLKMCESRLHSQTNKV >gi|289656366|gb|ADEA01000001.1| GENE 21 21148 - 23085 284 645 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 419 629 16 226 245 114 36 4e-24 MKNYDWQAAARRFLNHIRPKRTDRPAMQQSNWWLVANRFRDYIRPERWLIAGSLLSLLTA TFVRLLKPLPLAFAVDYILVEVVEHVDKIDGGKSPAVKNIKFDTSLFEISLQSIDKQYLL LGCGIAVVLIALLMAASNFLSTVGLSLAGSRILAKVRSDLFVHLLGLSMRFHSQAKNGDL TMRLVSDVAMLREAVVTALMPMLANIFVLSGMLIVMFYLDWRLTLFAIASLPFLWFTTNR SGRRIHEVSRAQRKKEGGLASKASEYIASIKTIQSLSLENETIRSFEGNNDQSRTQEVKS KRLAAGLERRVDLLVAVVTAVVLFKGANNVLGGQMSTGELIVFMSYLNNSFRPVREYAKY TARLSKALAAGERIIDLMDQQPDIKDRPSAKTLTDVRGEIHFDHVGFGYQDKDKNFVSVL KGMDFKINPGESVAIVGPSGSGKTTIANLMLRLYEPDSGIIRIDGRNIQEYTIASLRKQI AVVPQENLLFGVSIRDNIALGALHNAGELTHAEIIAAAKLANAHDFISVLPDGYNTVLSE LGSSLSGGQRQRIAVARAAISHSSILLLDEPTVGLDRESESHVINALHNLMKNRTTIMIT HDLAFAATADRIIFIEGGVVMEQGSHEELLALGQNYANWWKMQIS >gi|289656366|gb|ADEA01000001.1| GENE 22 23119 - 24309 1201 396 aa, chain - ## HITS:1 COG:all5194 KEGG:ns NR:ns ## COG: all5194 COG0438 # Protein_GI_number: 17232686 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Nostoc sp. PCC 7120 # 1 387 1 378 386 345 47.0 6e-95 MRVAYICADPGIPVFGTKGASVHVQEVVKAMLSRGLDVTLFAQRLGGDVPEALKNVPIRK LETLPKDSVEIRARAALAANAKVEAMLEAEGPFDMVYERYSLWSSAGMDFAKKHGCAGIL EVNAPLIEEQKKHRELPLEDEAQRIAESVFAAADAMIAVSPGVKQYLETFEKARGRVHVV ANGVALDRFAPAAEKNARRLQTPTPSSEVTVGFLGTLKPWHGLATLVEAWALLRQRGQDV RLLIVGDGPEHESLHNRIDALGLLEHVEFTGAVQPENVPEWLGRMDIAVAPYPNMEHFYF SPLKIYEYMAAGIPVVTTKVGHLESVVEHNRNGMLVEAENPEKMADCIASLIKQPAELRR LGTSARQTAEQEHSWLAAVDRILRIAADTGRLKKTV >gi|289656366|gb|ADEA01000001.1| GENE 23 24325 - 25560 1041 411 aa, chain - ## HITS:1 COG:all5195 KEGG:ns NR:ns ## COG: all5195 COG0438 # Protein_GI_number: 17232687 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Nostoc sp. PCC 7120 # 12 401 1 404 418 353 46.0 3e-97 MNNNPTSATRPLYIGYILKRYPRFSETFVVNEILAHEREGMKIDIFALGPVEDTHFQDGI SRVRAPVTRLEHKHYKPETVWLLIQTAFERLPNFAEKLARAKCAVYELTQSISVALEIQN RGIQHLHAHFGTQAATVARLAADFAGITYTFTAHAKDIYFRYAEPTRLDMKMRDAFATVT VSDYNLAYLQQQYGKDAEKAVRIYNGMDLSKFPYNEFTSRERHILAVGRLVPKKGFSVLL EALSLLKKQNIRMHCTLVGGGPLYEDLSARTEALDIADIVTMVGPMPQPDIIRLMKNSNM VVAPCVISDDGDRDGLPTVLLESMALGTPVISTQVAGIPELVIDGETGFCVPSENPQALA EAMARLLDDHDICRTFSRNGRALIEREYDEDRNAAKLRQIFNDAIDSRPAV >gi|289656366|gb|ADEA01000001.1| GENE 24 25582 - 26772 1157 396 aa, chain - ## HITS:1 COG:all5196 KEGG:ns NR:ns ## COG: all5196 COG4671 # Protein_GI_number: 17232688 # Func_class: R General function prediction only # Function: Predicted glycosyl transferase # Organism: Nostoc sp. PCC 7120 # 13 390 27 410 423 339 44.0 5e-93 MPNILKNRNTAPRIAFYSHDTMGLGHVRRNMLLAQSVLEAHPDADVLLLSGVRESGAFKL PQGADSVTLPTYFKTSEGKYIPRSLGNDITRLVKIRKEIISAALDAFEPDIVIIDNVPRG AMNELDNILPELASRGTHIILGVRDIIDEPEAVLNQWEKLKNIEIIRLYFSEIWVYGDPN LYDFIKEYRLPEDICEKLRYVGYLDQTRRNETRGLDNIISEVKSPYALCAVGGGQDGFEL ARAFVQARLPEGWNGLLIAGALMPGQQREQLHALAGARQDIKVIDFVPEPLKIMRNAECI ISMGGYNTTTEILSFNKRALIVPRIIPRTEQWIRASRLAEMGVIDCLHPKDLTPQVLSEW LASRKTKLNARDVLRFDGLDRIVNEIQAILHNNNAN >gi|289656366|gb|ADEA01000001.1| GENE 25 27154 - 28284 1430 376 aa, chain + ## HITS:1 COG:PM0389 KEGG:ns NR:ns ## COG: PM0389 COG3203 # Protein_GI_number: 15602254 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Pasteurella multocida # 1 338 1 283 350 76 26.0 7e-14 MKKTALAFLISAFAASTASAVTLVDSQNSGTKVEFVGSARIKLTNTADKETDVKEGSVTK NQTNRPIQNNGTRFGFKLKQSLGNDFYGLGRVEWRFRGKDNAGNDARSNHNFDHLYTRQL YAGVGHKRFGELTYGNQSVITDDVKQTDLANTLSLSDGLLASSVRRSVQYVYDNKDQGIK AGVFYGGSSPRGNDGLSLDNKRKDIWGVGAVKKFTIDDKQEFIVGTGTSRERFRQSEPSD YSRTAYSIGSAYTYDKTTVGLDLERSITKDEEGAGNKETNNEIRTILYHKLTSDWRAYGM YAYKTEKQDYVSGSDKKEKQHQFMLGTEYYLIPKSKPFNMKTFVEVQNTHTKKYRRDELR TKERNYTTVVGLRAYW >gi|289656366|gb|ADEA01000001.1| GENE 26 28708 - 29244 635 178 aa, chain + ## HITS:1 COG:no KEGG:DNO_0911 NR:ns ## KEGG: DNO_0911 # Name: nrdG # Def: anaerobic ribonucleoside-triphosphate reductase activating protein (EC:1.97.1.4) # Organism: D.nodosus # Pathway: not_defined # 1 156 1 156 160 210 66.0 2e-53 MNRLKFTIEQIVWQEVPGEVSLAFLFSGCPLRCKGCHSADAWKEGIGTELTEDYLRGRLK RYRGLISCVLFMGGEWQPEALQKMLGIVTQAGLKACLYTGLEREELEAVSDGILPYLTYL KTGRWQMELGGLDSPTTNQKFIDLRTGEVLNRLFIKDKPAPKIIPITTQPQAAAFQTA >gi|289656366|gb|ADEA01000001.1| GENE 27 29279 - 31060 2972 593 aa, chain + ## HITS:1 COG:TM0385 KEGG:ns NR:ns ## COG: TM0385 COG1328 # Protein_GI_number: 15643151 # Func_class: F Nucleotide transport and metabolism # Function: Oxygen-sensitive ribonucleoside-triphosphate reductase # Organism: Thermotoga maritima # 13 589 39 644 651 244 30.0 4e-64 MIRLHPEQLNGKLQFMHDYISAQNAADGSKMDANANVTQKNIATMEAEIMKDFFVQINRA QVSRKIAEIFDQSVADEYIRQIEAHEIYVHDETSLKPYCVSVTLYPFLLDGLSKLGGESK APQHLASFCGSFINLVFAISAQFAGAVATVEFLTYFDYFARKDYGDNYLETHGKEIANHM QQVVYSINQPAAARGYQSVFWNISVYDQYYFDAMFGDFVFPDFSKPMWASVAKLQNFFLK WFNQERSKAVLTFPVVTAAMLTDGGKCKDTVFADEMAKELAEGNSFFVYLSDNPDSLASC CRLRNAIEDRTFSYTLGAGGVATGSINVITINMNRLEQDGRDLAAEVAKIHKYQYAYRKL MEEYQAAGMLPVYDAGFITLDKQFLTIGINGMAEAAESQGIKVGYNDNYISFVQGRLKTI FEANQAASKHYGVKFNTEFVPAENLGVKNAKWDKADGYKVSRECYNSYFYVVEDEEINAL DKFLLHGKELVDWLDGGSALHLNLDEALPESGYRSLLDIAAQTGCNYFCVNVRITICNEC GHIDKRTLHACSACGSHDIDYGTRVIGYLKRVSAFSSGRRKEHALRHYHRKAA >gi|289656366|gb|ADEA01000001.1| GENE 28 31184 - 31675 394 163 aa, chain + ## HITS:1 COG:no KEGG:NMO_1156 NR:ns ## KEGG: NMO_1156 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 11 157 4 150 160 121 43.0 1e-26 MPIPFLRARMKILPALFVSVLIPAAAASDTFGYLAFWENPDRPEVVTVTKTTQEDADELA AKVELDAFCRAQDAKLDAGGKVRTGCQNVTALRNSCAAAAWPGARGLLKHNNVVVAGNMK FAPVAEEALAKCRLKYGEDADCQIETVFCTSSSAYGGGQPKAD >gi|289656366|gb|ADEA01000001.1| GENE 29 31777 - 32265 546 162 aa, chain + ## HITS:1 COG:no KEGG:NMC1253 NR:ns ## KEGG: NMC1253 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 160 2 160 160 166 51.0 2e-40 MKKTLFALIIGGLAAAATAADTYGYLIFWQNPANLNESVQVKTTRENAPQADAHQEMRDY CRSKDIQAGVQQDNEHTGCKTIVPLHNTCVAVAFPKNDGRLMHDTAVVMTSPFYRNAQQA ALNQCMKKYGTQGKCVVETAYCTESEYYGGTVRTMWNRLKSR >gi|289656366|gb|ADEA01000001.1| GENE 30 32368 - 32820 832 150 aa, chain - ## HITS:1 COG:NMA1112 KEGG:ns NR:ns ## COG: NMA1112 COG0756 # Protein_GI_number: 15794059 # Func_class: F Nucleotide transport and metabolism # Function: dUTPase # Organism: Neisseria meningitidis Z2491 # 1 148 1 148 150 239 77.0 1e-63 MQTEVELKILNPKMADKLPAYATPGSAGLDLRACLDEAVILQPGDTYLVPTGLAVHLANP DYAAVLLPRSGLGHKHGIVLGNLVGLIDSDYQGELKVSVWNRGKEAFTIEPMERIAQMVI VPVVQASFKVVDEFAASERGEGGFGSTGKS >gi|289656366|gb|ADEA01000001.1| GENE 31 32948 - 33580 929 210 aa, chain + ## HITS:1 COG:NMA1572 KEGG:ns NR:ns ## COG: NMA1572 COG0259 # Protein_GI_number: 15794465 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxamine-phosphate oxidase # Organism: Neisseria meningitidis Z2491 # 1 210 1 210 210 328 81.0 4e-90 MDLHNIRADYSKRELSESECHADPIVQFEQWLNEAIHSQVNEPTAVNVASVGEDGRPNSR MVLLKEVNPQGFVFFSNYLSRKGRSFDAHPFAAMTFFWPELERQVRVEGRIEKLDAAASD EYFDSRPYTSRIGAWASAQSEVLSSKAMLVAKAAAVGAKHPLHVPRPPHWGGYLVIPDRI EFWQGRPSRLHDRIQYRLVDGNWIRERLSP >gi|289656366|gb|ADEA01000001.1| GENE 32 33815 - 34861 1770 348 aa, chain + ## HITS:1 COG:NMB1361 KEGG:ns NR:ns ## COG: NMB1361 COG1187 # Protein_GI_number: 15677226 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Neisseria meningitidis MC58 # 1 347 2 348 350 607 95.0 1e-173 MSKQPTSKRQWRDGAAPSAKKIAKPFKSKARPKDETRKAASKPYGQKVSDDLKPQNAPKQ RAAKARKLVVRNPNQKIMERARDLKERRSDLSRMEPERLQKVLAASGVGSRREMEEWINN GWVTVNGKTAQLGDKVTPDDHVTVKGSIIKLKWADRLPRIILYYKQEGEIVSRDDPQGRV SIFDRLPQAASSRWVAIGRLDINTSGLLILTTSGELVQRFAHPSFEVEREYAVRVLGGLT TEQMRSLTEEGVMLEDGLAKVERIYEQGGEGANKWYNVVIKEGRNREVRRIFESQGLTVS RLVRVGFGPIGLPNRLKRGQFYELNPAEVANIIKWADMLLPGERRRKA >gi|289656366|gb|ADEA01000001.1| GENE 33 35365 - 36234 667 289 aa, chain + ## HITS:1 COG:aq_136 KEGG:ns NR:ns ## COG: aq_136 COG1858 # Protein_GI_number: 15605716 # Func_class: P Inorganic ion transport and metabolism # Function: Cytochrome c peroxidase # Organism: Aquifex aeolicus # 72 247 22 196 355 207 58.0 2e-53 MNYQNPRRLVLPLAVLFALAACGGQGSGAPEAASGASEAAVQTASPTVAGNAASNAASAA SAAVADSNASPEDQELLKRAQSIFKPLPSAEEMQKLRPFTEEQVKLGHQLWYEPRLSKGN TVSCNSCHNLATAGVDNLPTSQGHKGQFGGRNSPTALNAALLGMQFWDGRAADVEEQAGG PLVNPVEMANDSQEAAAAKIAKIPEYQELFKTAFPEDGAVSFKNITAALGAFERTLLTPT KWDDYLERQRFRLERAGTQRRARLYGQRLYRLPQRRQPRRRNLPKIRFG >gi|289656366|gb|ADEA01000001.1| GENE 34 36092 - 36568 761 158 aa, chain + ## HITS:1 COG:aq_136 KEGG:ns NR:ns ## COG: aq_136 COG1858 # Protein_GI_number: 15605716 # Func_class: P Inorganic ion transport and metabolism # Function: Cytochrome c peroxidase # Organism: Aquifex aeolicus # 5 155 196 353 355 159 50.0 1e-39 MTTSKGNVSALSEQERKGVRAFMDNGCIACHSGVNLGGATFQKFGLVEGPYWKFIEDPKH DKGRADVTKKAEDEFFFRVPGLRNVAKTYPYFHNGSVWELDKAVTIMGKAQLGKDLSQDE VENIVAFLKTLSGNVSDSARTMPELPLSAPMESHPNNK >gi|289656366|gb|ADEA01000001.1| GENE 35 36974 - 38875 2791 633 aa, chain + ## HITS:1 COG:NMA0397 KEGG:ns NR:ns ## COG: NMA0397 COG0422 # Protein_GI_number: 15793405 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine biosynthesis protein ThiC # Organism: Neisseria meningitidis Z2491 # 1 633 1 633 633 1293 97.0 0 MTTPKKTAKTSGNEARELADLSEDIGIRFKYPNSERVYLQGSRDDIRVPLREIRQDDTYT AQGAEANPPIPVYDTSGVYGDPAAHIDLKQGLPHVRTAWLDERGDTEILPKLSSEYGIER AHDPQTAHLRFNQITCPRRAKSGRNVTQLHYARRGIITPEMEFAAIRERMKLDELFRRPE YAKLLKQHAGQSFGANIPTHPDQITPEFVRQEIAAGRAIIPANINHPELEPMIIGRNFRV KINGNLGNSAVTSSLTEEVEKMVWSLRWGADTIMDLSTGAHIHETREWIIRNAPVPIGTV PIYQALEKTGGIAEDLTWDLFRDTLIEQAEQGVDYFTIHAGVLLRYVPMTANRLTGIVSR GGSIMAKWCLAHHKENFLYTHFDEICEIMKAYDVSFSLGDGLRPGCIADANDESQFAELH TLGELTAKAWKHDVQVMIEGPGHVPLQRVKENMTEELQHCFEAPFYTLGPLVTDIAPGYD HITSGIGATNIGWYGTAMLCYVTPKEHLGLPDKEDVRTGIITYKLAAHAADLAKGWPGAQ LRDNALSKARFEFRWRDQFRLSLDPERAESFHDETLPAEGAKIAHFCSMCGPKFCSMKIT QEVRDYADKQKAQRQGMEEKAVEFVKKGAEIYS >gi|289656366|gb|ADEA01000001.1| GENE 36 38931 - 39680 454 249 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 [Bacillus selenitireducens MLS10] # 2 243 4 246 255 179 40 7e-44 MANQRLIYGFHAVNARLWQNPKSITELYIQEGKNDARTRDVLEKAANENVRVHFADADRL NAISKGARHQGVVGFIDASKNHVHLEDVLENLSEPPLLLILDGITDPHNLGACLRTADAM GVHAVIAPKDKSAGLNATVSKVACGAAETVPYITVTNLARTLRELKEYGIWIIGTDMGGD ADLYHCDLPDSAAWVMGNEGEGMRRLTREHCDMLVSIPMFGTVESMNVSVSAGMVLSETR RQRVLKAEK >gi|289656366|gb|ADEA01000001.1| GENE 37 39741 - 40049 569 102 aa, chain - ## HITS:1 COG:BMEII0516 KEGG:ns NR:ns ## COG: BMEII0516 COG4541 # Protein_GI_number: 17988861 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Brucella melitensis # 4 101 1 98 99 97 64.0 7e-21 MTPLISSDSMLVFLSMLAVTYSTRLAGFFALRNRTLSKRAAAVMEAAPGCVLISVIAPYF VSDKPHELIAIALTVLAASRLSMLPTVLIGVAASGLFGYLLQ >gi|289656366|gb|ADEA01000001.1| GENE 38 40046 - 40516 742 156 aa, chain - ## HITS:1 COG:mll2427 KEGG:ns NR:ns ## COG: mll2427 COG1296 # Protein_GI_number: 13472209 # Func_class: E Amino acid transport and metabolism # Function: Predicted branched-chain amino acid permease (azaleucine resistance) # Organism: Mesorhizobium loti # 1 154 88 242 244 169 60.0 2e-42 MINSRHILMGAALAPYLKGVPLKKALPALFFMCDESWAMGLAEAQKRKPLGLPAFNMPYY AGVCFILYTTWISFAAVGAAVGPMFGDVAAWGFGMAFPAVFLVLLRSMWKSFTAARPWFV SLIVAAMTYLSTEGAWYVPAGALAGLMTAYFQGGQK >gi|289656366|gb|ADEA01000001.1| GENE 39 40559 - 40756 308 65 aa, chain - ## HITS:1 COG:NMA1111 KEGG:ns NR:ns ## COG: NMA1111 COG1296 # Protein_GI_number: 15794058 # Func_class: E Amino acid transport and metabolism # Function: Predicted branched-chain amino acid permease (azaleucine resistance) # Organism: Neisseria meningitidis Z2491 # 1 65 1 65 160 105 86.0 2e-23 MASPASPQSEFLRGIKECSPMLIGLLPWALILGVQGGQKGMSWLEMLLMTGMNFAGGSEF ATVNL >gi|289656366|gb|ADEA01000001.1| GENE 40 40935 - 41678 1314 247 aa, chain + ## HITS:1 COG:RSp0106 KEGG:ns NR:ns ## COG: RSp0106 COG0725 # Protein_GI_number: 17548327 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, periplasmic component # Organism: Ralstonia solanacearum # 7 247 16 257 257 202 51.0 3e-52 MKIRYTALLLALAAGSVSAAEITVSAAASLKEAFADIAAKYEKQYPQSKVKLNTAGSGAL LQQALQGAPVDVLAFADQETMNQAQVKGVIDKATRKSFALNSLVIAAPKDSKLTVGRLSD LEGYRFDRIAISNPASVPVGRYSKAALEKAGIWDNIRSKVITTQNVRQSLDYVARGEVDA GFVYNTDAMLMKDKVKVLKTVPTQEPVSYPIAVAASGPQKVEAKRFVQYVLSAQGQGVLN KYGFKKP >gi|289656366|gb|ADEA01000001.1| GENE 41 41810 - 42493 1168 227 aa, chain + ## HITS:1 COG:RSp1144 KEGG:ns NR:ns ## COG: RSp1144 COG4149 # Protein_GI_number: 17549365 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, permease component # Organism: Ralstonia solanacearum # 1 221 37 256 264 206 67.0 4e-53 MNESLITTLLLSLKIAGTATLLNFVFGTAAGFVLARGRFVGRGLLDTLLMLPMVLPPTVM GYYLLVVFGRNGTVGAWLKDNFGINLIFTWQGAVIAAAAVTFPLVFKPARAAFEEVSPQL EQAARVLGLNEWAVFFRVSLPLAWRGILAGVLLAFARSLGEFGATLMIAGSIPGKTQTLS VAIYEAVQAGDDALANGLVVLVSAVCIAVLLSTGRLMRSRGERNHAV >gi|289656366|gb|ADEA01000001.1| GENE 42 42483 - 43145 248 220 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 15 216 19 221 245 100 32 5e-20 MLFDIVLHKKLPSFGLDIALRSDARRLAVVGPSGSGKSLTLQLLAGLLKPDGGHIRVNGG TWFDERINLPAQKRRVGLLFQDYALFPHLTVAQNIDFGLARGLSNPSKRPSEKARYWLEM LRLERVAGHYPQQISGGQKQRTALARALVTEPELLLLDEPFSALDADLRTHTRNEVLQIQ QASGIPMILITHDRADAEVLADEVWTMEAGRLAAAGINAG >gi|289656366|gb|ADEA01000001.1| GENE 43 43255 - 44382 1953 375 aa, chain - ## HITS:1 COG:NMA0979 KEGG:ns NR:ns ## COG: NMA0979 COG5008 # Protein_GI_number: 15793936 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, ATPase PilU # Organism: Neisseria meningitidis Z2491 # 7 375 2 370 370 667 88.0 0 MENTPRSAKDDLYTWLRHMNKFKGSDLFITTNFPPAMKVDGKITRLTDEPLTAEKCMEIA FSIMTTKQIEEFSGTNECNFAISLPDTSRFRVNAMVQRGATALVFRAITSNIPKFESLNL PPVLKEIALKKRGLVIFVGGTGSGKSTSLASLIDYRNENTFDHIITIEDPIEFVHQHKNC IITQREVGVDTESWMAALKNTLRQAPDVILIGEIRDRETMDYAIAFAETGHLCMATLHAN STNQALDRIINFFPEERRTQLLTDLSLNLQAFISQRLVPREGGRGRVAAVEVLLNSPLVA ELVHEGRIHEIKEQMKKSTAMGMQTFDQALYDLYERGDISFQDALKNADSAHDLRLDIQL RSRRAQNAGPDLELI >gi|289656366|gb|ADEA01000001.1| GENE 44 44527 - 45228 760 233 aa, chain + ## HITS:1 COG:NMA0978 KEGG:ns NR:ns ## COG: NMA0978 COG0775 # Protein_GI_number: 15793935 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside phosphorylase # Organism: Neisseria meningitidis Z2491 # 1 233 1 233 233 290 73.0 2e-78 MSEQTIAVIGAMEQEIALLRTRMEEVQTLSFGSFTVCAGRYAGKRMVLALSGIGKVNAAV ATAWVVHQFNPDCVINTGSAGGLGKGLKVGDVVIGDKAAHHDVDVTAFGYEWGQVPRLPA AFDADERLVGAAEQAASVFEGASVRRGLIASGDQFVHSSGRVAEIRSRFPDIQAVEMEAA AIAQTCTQLGVPFVVIRAVSDSADEKADISFDEFLKTAAVHSAEMVLKMMERL >gi|289656366|gb|ADEA01000001.1| GENE 45 45399 - 47192 2637 597 aa, chain + ## HITS:1 COG:NMB0766 KEGG:ns NR:ns ## COG: NMB0766 COG0481 # Protein_GI_number: 15676664 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane GTPase LepA # Organism: Neisseria meningitidis MC58 # 1 597 1 597 597 1156 99.0 0 MKNIRNFSIIAHIDHGKSTLADRFIQYCGGLDLREMSTQVLDSMDIEKERGITIKAQTAA LSYKARDGQVYQLNLIDTPGHVDFSYEVSRSLSACEGALLVVDASQGVEAQTVANCYTAI DLGVEVVPVLNKIDLPAADPERVEQEIEDIIGIDAVGAVQCSAKSGIGVEDVLEEIVAKI PAPTGDENAPLQAVIVDSWFDNYVGVVMLIRVKNGTIKLKDKVRFMSTKAETQVEQLGVF TPKSVQKQELKAGEVGFLITGVKELGQAKVGDTVTLVANPASEPLPGFQEVQSQVFAGLY PVESHDYEALRDALEKLQLNDASLKFEPEVSQALGFGFRCGFLGLLHLEIVQERLEREFD MDLITTAPTVVYEVVLKSGEKIEVENPSKLPDIGSIETILEPIITATILVPQEYVGNVMT LCNQKRGVQVNMQYMGRQVMLTYDLPMNEVVMDFFDKLKSTSRGYASLDYHFKEFQPSDL IKLDIMVNGEKVDALSLIVHRQSAVHRGRELASKMRELIPRQMFDIAVQAAIGSQIIARE NVKALRKNVLAKCYGGDITRKKKLLEKQKAGKRRMKQVGNVEIPQSAFLAILQVSDK >gi|289656366|gb|ADEA01000001.1| GENE 46 47192 - 48178 1134 328 aa, chain + ## HITS:1 COG:NMB0765 KEGG:ns NR:ns ## COG: NMB0765 COG0681 # Protein_GI_number: 15676663 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal peptidase I # Organism: Neisseria meningitidis MC58 # 1 328 1 339 339 334 49.0 2e-91 MSTNLLYAAIAAIAVGFVMFLFSSKERGENGEWSSALQWGYLLIMVGIFGVLSFNMSFTA VLLVFVAFTGIIWIIHKFRLSRDPSHKDRGHFTDYMSGFFPIILFVFVLRTFVAEPFQIP SSSMRPGLVVGDFILVNKFAYGIRKPIINDVLVETGKIQRGDVVVFNYPEDTSVNYIKRA VGLPGDVVEYKNKVLSVNGQVMADKADGKETYTENTRQYGVMDIEANAYRENIGDHSFRV LKMAGQPSFIPQAVRASFPFRDNCEYAEDGSSFKCIVPKGYYFMMGDNRDNSEDSRYWGF VDDQLIVGKAFFIWMNFRDKSRIGKSIQ >gi|289656366|gb|ADEA01000001.1| GENE 47 48207 - 50918 1041 903 aa, chain + ## HITS:1 COG:PM0804 KEGG:ns NR:ns ## COG: PM0804 COG0612 # Protein_GI_number: 15602669 # Func_class: R General function prediction only # Function: Predicted Zn-dependent peptidases # Organism: Pasteurella multocida # 15 814 22 829 923 135 20.0 3e-31 MNGLIHKIILTAALSTAAVSVCARTAYTAGRLKNGLAYHILTVPSAGRYIDVQMQVGAGA SDENGIEEIGTAHMVEHMVFRSAPDFPDGVGNALVAAGWRRGAEFNALTGHERTLYLFRS DKGRAGLEQALRALSAMMSPHVFSAEDWRQEKQIIEAEWRNGLGAAGRMNRWRTEVLRSG SRQARFAVIGTLESIRNTPPQVLEAFHRRWYVPENMRLVVSGRISSDEAVPLLEKYFGGL RQGGLPERGGSYYEPVLRQGWHVAESREGGSFISVLFRFDDSPSRSDDDDGERERNIDRI ALYILTQRADKRQQGRPETGDRITVRKASIGRHTSAVGFATAVAAPGGHRAGLAAILELR ERILRKPVTPLEFETGAAAVRDEAARAKRETGLPDGFEQAVQTVTEAVFAGRPVRIPAQK AEAAEAALRRIGPEDISRRLRQWLEADDKLVQVQSPGSDGVKDLPRPSEIAALAEKLRAA ELPELPTDTADGGFTMRPEGGAIVAEQHERRLKITRWTLQNGDTVVVQNHPAADGKTYIR ILGETGFMGAGSHPRLARTAQKTVWQSAPQGFTPVQLHSWMQRHRITLNMTLQADGSKIA GSAPDEETESLLRLYHAYAVSPQVGAAESTLLQRVRAEEAADGAAKERAAEEIRFGRISE PVPVGAEAVGKPQFLAQWRNIIQAPAAVYILTGQSAARLKPLVGQYLAGIPRRPSENAAP RLPLSGSKMERRAVHSEARSDVSAWTFASRRWNPQTAVQIKLLRILAGERLKTELRDKAA GIYSLKFEAVLNPARNRVESELHFTAAPDKAAILLRLGEETLAALPDTLTEQQLVPLRRR FIEQETGRLKNPEAQLERLIERERYPADADSLSEILTLEKLREAAKLLWPSENRRVLIAD PKE >gi|289656366|gb|ADEA01000001.1| GENE 48 51036 - 53909 4048 957 aa, chain + ## HITS:1 COG:NMB0962 KEGG:ns NR:ns ## COG: NMB0962 COG0178 # Protein_GI_number: 15676855 # Func_class: L Replication, recombination and repair # Function: Excinuclease ATPase subunit # Organism: Neisseria meningitidis MC58 # 1 948 1 948 949 1900 98.0 0 MCKHHPHHTRDNDTIRIRGARAHNLKNVDLDIPRHKLVVVTGLSGSGKSSLAFDTLYAEG QRRYVESLSAYARQFLQMMDKPDVDLIEGLSPAISIEQKSTSHNPRSTVGTVTEIHDYLR LLYARVGTPYCPEHNLPLSSQTVSQMVDAVLKLPEDTRVMILAPAVRERKGEFVDFFADL QAQGFARVRVDGEVYQLDEVPKLEKNIKHNIDVVIDRVKVKADIKQRLAESFETALRHGN ERALAMEMDSGEEHWFSARFACPVCSYSLPELEPRLFSFNNPMGSCPTCDGLGNTNFFDP EKVVAHPELSLATGAIDGWDKRNQFYFQMIQSLARHYGFDVQAAWETLPEKVKKVVLHGS GKEVIDFTYLSERGTTFNRSHAFEGIIPNLERRYRETDSETVREKLREYQNHRACPSCGG ARLRKEARYVYVSGEPLHEVSAWPLTKTHRFFETLDLDGNKKQIAEKILKEITERLGFLI NVGLDYLNLSRSAETLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLLATL KRLRDLGNSVIVVEHDEDAIREADFVVDMGPGAGEHGGNVLIADTPENVAKCEKSVTGQY LSGKKSIAVPSERTPVNPDRMLILKGARGNNLKNVTLELPLGLITCITGVSGSGKSTLIN DTLAKITARELNRAQEEPAPYDDIHGLEHLDKVINVDQSPIGRTPRSNPATYTGLFTPIR ELFAGVPLSRERGYNVGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCEVCHGKRYN RETLEIQYKGKNISQVLDMTVEEAREFFDAVPTVSRKLQTLMDVGLGYIRLGQSATTLSG GEAQRVKLALELSKRDTGRTLYILDEPTTGLHFADIALLLEVIGRLKGKGNSIVIIEHNL DVIKTADWIVDLGPEGGDGGGRIIAEGSPEELAKVKGSYTGKYLKHILNNQNLETSK >gi|289656366|gb|ADEA01000001.1| GENE 49 54129 - 54614 335 161 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298368383|ref|ZP_06979701.1| ## NR: gi|298368383|ref|ZP_06979701.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 161 11 171 171 297 100.0 1e-79 MKLKSVAAGVAALLILSACAEYDNFMDDMSDLKNQGSALFGGAVEKASPAQICKEYRENS MMANRKYIGKTIHPTGKVLRIYKDDFSKFGKNGGTILENTYRVVMQVGSERINAGMSSSA AAANLKVGQIITMNGQIESLGGDDTGSSCIVLLRHSVPVTK >gi|289656366|gb|ADEA01000001.1| GENE 50 55724 - 55852 131 42 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225075224|ref|ZP_03718423.1| ## NR: gi|225075224|ref|ZP_03718423.1| hypothetical protein NEIFLAOT_00224 [Neisseria flavescens NRL30031/H210] # 1 42 1 42 157 77 90.0 3e-13 MARYRRNFIASGTFFFTVKLADSKSRLLVENIGLLPAAYMDV >gi|289656366|gb|ADEA01000001.1| GENE 51 56044 - 57096 1350 350 aa, chain + ## HITS:1 COG:RSc1174 KEGG:ns NR:ns ## COG: RSc1174 COG4174 # Protein_GI_number: 17545893 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Ralstonia solanacearum # 1 348 1 348 351 428 66.0 1e-120 MYRYILHRLLLLIPTLLGILAITFAVIQFVPGGPVEQMVQQLTHGAVDGETATVVAGDTM KHGNRISPEDLAALNALYGFDKPPLTRFADMVWRFARFDLGKSFFHHETVFELVKQKMPV SMSLGLWTFFLTYLICIPLGIAKAVRDGSRFDAVTGMVVLVGYTIPPFVLGLVLLVLFGG GSFFAWFPQGGLVGDDFDTLSWAGKIKDYLWHMALPITASVAGSLAVTTVLTKNVFLEEI RRQYVYTARAKGLPEKQILWKHVFRNAMIPLITGFPAAFIGAFFTGSLLIETLFSLDGLG LLSYEAVMKRDYPVVMGTLYVFTLMGLLAKLVSDISYSWVDPRIHFGGQK >gi|289656366|gb|ADEA01000001.1| GENE 52 57124 - 58170 1048 348 aa, chain + ## HITS:1 COG:RSc1175 KEGG:ns NR:ns ## COG: RSc1175 COG4239 # Protein_GI_number: 17545894 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Ralstonia solanacearum # 12 346 22 359 374 387 59.0 1e-107 MTDKPFQTMKTHTSNPTWQAFKQHKRGWFALRVLAVLFAVALLAPLWSNDKPLLIRYQGE YYFPLVNEYNETVFGGDFDTPADYLDPLIRGNITSNGNYAVYLPNPYDADTLNDFDTQPD PASPSERHLLGTDDRGRDVLARLVYGFRDSLLFALALTLVTTVIGVITGAVQGYFGGKTD LLMQRFIEIWGGMPELYLLIILSSFFNPSLLILLVLLSLFGWMGLSDYVRAEFLKNRQAD YVLAARSMGVGNRAIMWRHILPNSLTPVLAFLPFRISGAVLALTSLDFLGLGVPASQASL GELLAQGKDNLDAWWIGLSTVGTLTIMLLLLVMIGEGLRQAFDVRIRS >gi|289656366|gb|ADEA01000001.1| GENE 53 58207 - 59748 502 513 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 266 509 11 263 329 197 40 2e-49 MNILEIENLNASFPGKQVLYDVSLTVQTGRKLALVGESGSGKTVLAQGIMRLNPLVSFEG HLKFDGNDLLTQSERALQKLRGREIGMVFQEPMTALNPVMRVGAQIAEVLTLHLGLDKKQ AWARAVELLAETGIREPEQKAFAYPFQLSGGQRQRAMIAMAVAAEPKLLIADEPTTALDV AVQAQILDLLARLQQAHNMTMLYITHDLNLVRRFADDVAVMRGGRIVETGAAAEVFARPQ HEYTQMLLNAGAARKVVPLADNPATVLQAEQLSVAVKETAGWFKKRSKTLLEPVSFDLKA GETLGIIGESGCGKTTLAKAVMHLIDAGGRLKINGEDWKRESRRDIQMVFQDPFGAFNPR MNVFNIVSEALRVHEPDLSRAEMRQRVQDVLRQVGLPEDALERYPHAFSGGQRQRLAIAR AIIVRPKILVLDEPTSALDVQWQQQILELLADLQKKHGLSLIIISHDLAVIRALSHRVMV LKDGKIVEEGGCETVFANPSSDYTRHLMSFRAG >gi|289656366|gb|ADEA01000001.1| GENE 54 59789 - 59902 67 37 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MATLQKSYYTFATLEIFSPKPYPAQHLIQFDTKRKNS >gi|289656366|gb|ADEA01000001.1| GENE 55 59899 - 60231 507 110 aa, chain + ## HITS:1 COG:NMA1578 KEGG:ns NR:ns ## COG: NMA1578 COG0526 # Protein_GI_number: 15794471 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Neisseria meningitidis Z2491 # 1 110 1 110 110 199 90.0 7e-52 MSSELIIHTTDANFEQDVLKSGVPVLLDFWAPWCGPCKMIAPILDDIAAEFEGRLKVVKI NIDDNEATPAKFGVRGIPTLMVFKNGENVATKVGALAKGQLTAFVNASIS >gi|289656366|gb|ADEA01000001.1| GENE 56 60525 - 61844 1703 439 aa, chain + ## HITS:1 COG:mll1146 KEGG:ns NR:ns ## COG: mll1146 COG2733 # Protein_GI_number: 13471231 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Mesorhizobium loti # 17 438 24 428 431 211 32.0 3e-54 MHTLSAEVRTELARARLRKSRRWATGLLLAACVLFFASQLLVKQYGWLAYVKAFAEASMV GALADWFAVTALFRRPMGLPIPHTAILPRNQERIADELGRFIENNFLLGKPIALRVYQAQ PADKLLNWLGSEEVRAQWLPWVARQIPYLLRVAKPEQFARFAGMLLAQQYTGEKIGRTFS DGLRLLKANGTHEVLFCSLLKQLRRWLQSPDTRVLLEQNLREWAVKIETDAPSTWDKLKA TLKSTLVERVDDWVAEKALDWADNCLAAAEEDGNHAIRKGFDEQYDKIVEKLLESDAWHK QLEAVKMQIAQSPALQNHLAGFWRGIQDWAEKDVEKKNSACLRQLEKLLDHMLAQAAEFP QFMRRTDVRLSLAVRDFVMRYKGRAAQFVADKVKSWDGALMVQKLELSVGRDLQFIRING TLVGGLVGLAIYCVSLWLE >gi|289656366|gb|ADEA01000001.1| GENE 57 61952 - 62227 451 91 aa, chain - ## HITS:1 COG:NMA1496 KEGG:ns NR:ns ## COG: NMA1496 COG2919 # Protein_GI_number: 15794396 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation initiator # Organism: Neisseria meningitidis Z2491 # 1 88 1 88 92 113 68.0 7e-26 MKWVTVVLAAAAVWFQYSLWIGKGSLHDMGRIEEQLATQEEKNRSLTLRNNALQAEVTDL ATGQEAIAEIARVELGYIQDGETYYRFIGSR >gi|289656366|gb|ADEA01000001.1| GENE 58 62250 - 63536 1918 428 aa, chain - ## HITS:1 COG:NMA1495 KEGG:ns NR:ns ## COG: NMA1495 COG0148 # Protein_GI_number: 15794395 # Func_class: G Carbohydrate transport and metabolism # Function: Enolase # Organism: Neisseria meningitidis Z2491 # 1 428 1 428 428 771 92.0 0 MSAIVDIFAREILDSRGNPTVECDVLLESGVMGRAAVPSGASTGQKEALELRDGDKSRYL GKGVLKAVEHVNNEISQALIGIDANEQSYIDRIMIELDGTDNKGNLGANATLAVSLAVAR AAAEDSGLPLYRYIGGAGPMALPVPMMNVINGGEHANNSLNIQEFMIMPVGAKSFREALR CGAEVFHALKKLCNDKGFPTTVGDEGGFAPNLNTHEEALQLMQEAVVAAGYKPGEDVLFA MDCASSEFYKDGKYHLEAEGKAYSSEEFADYLADLVSKYPIISIEDGMDENDWAGWKLLT EKLGGKVQLVGDDLFVTNPKILAEGIEKGVANALLVKVNQIGTLSETLQAVDLAKRNRYA SVMSHRSGETEDSTIADLAVATNCMQIKTGSLSRSDRMAKYNQLLRIEEELAEAAYYPGK AAFYQLGK >gi|289656366|gb|ADEA01000001.1| GENE 59 63884 - 65347 2527 487 aa, chain - ## HITS:1 COG:NMB1201_3 KEGG:ns NR:ns ## COG: NMB1201_3 COG0516 # Protein_GI_number: 15677074 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Neisseria meningitidis MC58 # 242 487 1 246 246 459 95.0 1e-129 MRIVEKAYTFDDVLLVPAHSTVLPRDVKLQTKLTRNITLNLPLLSAAMDTVTEARLAISM AQEGGIGIIHKNMTPEMQAKAVSKVKRHESGIVKDPVIIAPNVLIRELLELRAQRKRKMS GLPVVENGKVVGIVTNRDLRFENRLDLPVSAIMTPRERLVTVPEGTSIDEARELMHKHKV ERVLVLNEKDELKGLITVKDILKTTEFPNANKDSEGRLRVGAAVGTGADSEERIKALVDA GVDVIVVDTAHGHSQSVIDRVKWVKSHYPEVQVIGGNIATAQAARDLVAAGADAVKVGIG PGSICTTRIVAGVGVPQLTAIHNVAEALKGTGVPLIADGGIRFSGDIAKALAAGAYSVML GGMFAGTEEAPGEIELYQGRSYKSYRGMGSLGAMSQGSADRYFQDKTDSTDKYVPEGIEG RVPYKGPIVNIIHQLMGGLRSSMGYLGCADIAEMHEKAEFVEITSAGMNESHVHDVQITK EAPNYHR >gi|289656366|gb|ADEA01000001.1| GENE 60 65555 - 65989 522 144 aa, chain + ## HITS:1 COG:no KEGG:NMCC_1263 NR:ns ## KEGG: NMCC_1263 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_053442 # Pathway: not_defined # 1 143 70 208 209 96 38.0 2e-19 MKITSLLLACTLCASAAFAAGDVYTWKGRNGGNSYSDVPRRLQPEHSGIVNIRTHSVSPA AVKPASAAGTGSLAEQQAKLNDQIAMQNKQVEEQNKKIEEENRQRQEDNCKAARLNRQFA ETARSNNREALIQRYESDVKRYCN >gi|289656366|gb|ADEA01000001.1| GENE 61 66062 - 67405 2310 447 aa, chain - ## HITS:1 COG:PM1434 KEGG:ns NR:ns ## COG: PM1434 COG2704 # Protein_GI_number: 15603299 # Func_class: R General function prediction only # Function: Anaerobic C4-dicarboxylate transporter # Organism: Pasteurella multocida # 4 445 1 437 437 531 74.0 1e-150 MSTMFFIQFAIVLLCILIGAQVGGIGLGVLGGVGLAVLAFGFHLEPTSPPIDVMLMIMAV VSAAASMQASGGLDYMIKIATRVLHRNPKYITFIAPAVTYLFTVLAGTGHVAYSVLPVIA EVSRRNGIRPSRPLTMAVIASQFAIVASPIAAAVVACVTYLEPQHITMADVLKVTVPSTI LGIGLACVFVNKLGKELKDDPHYQKLLAKPEYVKAHEKDPTEHTNLTVSPQAKLSVGIFL AAALLVVVMGAVPELRPTFQTEEGPKLMGMAHTIEIVMLSAAALIILLCKPDGNAITRGS VFHAGMRAVIAVFGVAWLGDTLMHGHLAEVKDTVSHLVETAPWTFAAALFVLSVLVNSQG ATVATLFPIAISLNIPAPVIIGTFVAVNGYFFIPNYGPIIAAIDFDSTGSTKIGKYIFNH SFMIPGLLSLIFSLIFGLMFAEALLRT >gi|289656366|gb|ADEA01000001.1| GENE 62 67676 - 68551 1428 291 aa, chain - ## HITS:1 COG:no KEGG:NMA1460 NR:ns ## KEGG: NMA1460 # Name: not_defined # Def: putative integral membrane protein # Organism: N.meningitidis_A # Pathway: not_defined # 1 291 1 291 291 353 73.0 3e-96 MIYLIASIVCSVAVAVLLKIARKQKIDIHQAVAVNYIAAVMLTMLVLKPDLGNPRAFLPT WWLFAALGVLLPSVFIIMGKSVDTAGIVKSDAAQRLSLFLPIVASFALFGEKLTEGRLIG ITLAFVALFCLLWKSGGGKKSGGLMNNAALLLGVWSGYGVIDILFKQVAKSGTAFSGNLL VAFSLAAVLMFGYLSYRSTKWTKEGVIGGAVLGCLNFANILTYIRAHQAMSENPTLVFAG MNIGVIVLGTLVGAAAFKEKISSINAAGISVAVCSIACLFYWPQLRSLAGL >gi|289656366|gb|ADEA01000001.1| GENE 63 68642 - 69004 669 120 aa, chain - ## HITS:1 COG:NMB1027_2 KEGG:ns NR:ns ## COG: NMB1027_2 COG3671 # Protein_GI_number: 15678002 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis MC58 # 14 120 30 145 145 85 39.0 3e-17 MNDVIEQNTPQDDNNRNYMMIIYGLYALSLVTAGCAALIGVILAYVKRDDMRGTIYENHI TYLIKTFWVSLAAGLVGACTTIILIGFLILGAGFIWYVYRVVAGFVKFYDGKTVSPDGWL >gi|289656366|gb|ADEA01000001.1| GENE 64 69033 - 69518 620 161 aa, chain - ## HITS:1 COG:NMA1462 KEGG:ns NR:ns ## COG: NMA1462 COG2606 # Protein_GI_number: 15794364 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 1 159 1 159 159 225 67.0 2e-59 MSKPNHPVTPAVRFLRGRKVDFEPYVYTYEEHGGTAQFAALFGIPEHQVVKTIVLQNEQK KGLVVLMHGDKHISTRNLARSLGMKHIEPADPKQAAKWTGYLVGGTTPFGMKTALPVYVE SSIWASDTIYINGGKRGFIIGVKPEALRSLDPQDVNVAVDD >gi|289656366|gb|ADEA01000001.1| GENE 65 69663 - 70016 466 117 aa, chain + ## HITS:1 COG:NMA1463 KEGG:ns NR:ns ## COG: NMA1463 COG0251 # Protein_GI_number: 15794365 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Neisseria meningitidis Z2491 # 1 115 1 114 120 142 66.0 2e-34 MDIRYFGQSARLSEAVVAGGFVFLSGMVPENTEADVKGQTQDVLAQIDRWLEKCGSDKAH ILEATVFLADMDGYAAMNEAWDEWVAAGRAPARACVQAGLADSRWAVEIKVSAVQAV >gi|289656366|gb|ADEA01000001.1| GENE 66 70114 - 70974 1320 286 aa, chain + ## HITS:1 COG:NMB1024 KEGG:ns NR:ns ## COG: NMB1024 COG0354 # Protein_GI_number: 15676912 # Func_class: R General function prediction only # Function: Predicted aminomethyltransferase related to GcvT # Organism: Neisseria meningitidis MC58 # 1 286 2 288 288 360 65.0 2e-99 MQTRLPFFAIVRVSGEDRAAFMHGQLSNDINHLAEGSACYATYNTPKGRVLANMLVLNRG SDLLLVMAADLTEAIVKRLRMFVLRAKVVFEPLPDYAAAAVLDENTEAHAAAEPSLSFPA AEENGVWTVSLPHTGRLKIGEAERLPEHDAAAENAWNLHEIRSGYAWISAATKETAVAQM LNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSGGSLEAAGIAVLENGAEAGQI INTALTDTGSLSLAVIKHAAAQAVLTDADGNSLKQEKLFFNIEPKE >gi|289656366|gb|ADEA01000001.1| GENE 67 71056 - 72174 1274 372 aa, chain - ## HITS:1 COG:NMA1400 KEGG:ns NR:ns ## COG: NMA1400 COG2890 # Protein_GI_number: 15794312 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methylase of polypeptide chain release factors # Organism: Neisseria meningitidis Z2491 # 38 369 1 329 331 444 70.0 1e-124 MYTISTSQKIPIEWRNESTQKPPKQAVYVHESNAADILKNAHTQTATVWTGDFHNAKQVL AAMKKRVRRPSEKTKNAPADIQTAFHAHRMKQAQQSRVLNMLAVEIGTGFQLSNPRAPDV RAALADVYAEPNDAPFLLPLNQLLGFIGAHEWHKKGIDIPQLGGKIHVPFGVFSPLRGEY LDLIAQAPLNPHIQTAFDIGTGSGVIAAILAKRGIPEITAIDTNPKAIACATANLARLGL DKQVAVQAVDLFPEGRADLIVCNPPWLPAKPTSAVETALYDPDNAMLTAFLNGVRQHLNP QGEAWLIISDLAEHLHLRDRDFLEQCFQTASLSVVGILETKPRHRKAADESDPLAFARNR ETTRLYRLEAVR >gi|289656366|gb|ADEA01000001.1| GENE 68 72301 - 72546 125 81 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298368400|ref|ZP_06979718.1| ## NR: gi|298368400|ref|ZP_06979718.1| hypothetical protein HMPREF9016_00063 [Neisseria sp. oral taxon 014 str. F0314] # 1 81 1 81 81 112 100.0 9e-24 MFYAALTATAFMFFFGMGHSNLKKNIRIILLVIGWAFFGLHSYIIGQIAMQYTVWQICGY LLFLSIELVIFLFMFQRIAAR >gi|289656366|gb|ADEA01000001.1| GENE 69 72765 - 74558 2791 597 aa, chain + ## HITS:1 COG:NMA1270 KEGG:ns NR:ns ## COG: NMA1270 COG0119 # Protein_GI_number: 15794202 # Func_class: E Amino acid transport and metabolism # Function: Isopropylmalate/homocitrate/citramalate synthases # Organism: Neisseria meningitidis Z2491 # 81 597 1 517 517 860 88.0 0 MQLDIDRLVAYFGGVNALAEALKQHDPENAATTAAIYKWRTRGSLPLAQLQKLTALAEAQ GRPLDLNAFLQKNESLERTEMTQTNRVIIFDTTMRDGEQSPGASMTKEEKIRIARQLEKM GVDVIEAGFAAASPGDFESVNAIAKIITKSTVCSLARAVENDVRKAGEAVSPALKKRIHT FIATSPIHMEHKLKMKPQQVIDAAVKAVKIAKEYTDDVEFSAEDAVRSDLDFLAKIFTAV IEAGATTINIPDTVGYSIPSVWYERISNIIKSVPNGDKVVWSTHCHNDLGMAVANSLAAV QAGVRQVECTINGLGERAGNASLEEIVMALKVRHDLFGLETSIDTTQIVPVSKLVSTITG YPIQPNKAVVGANAFAHESGIHQDGVLKHPETYEIMTAESVGWSTNRLTLGKLSGRNAFK TKLADLGIELESEEALNAAFARFKELADKKREIFDEDLHALVSDEMGSMNAESYKFISQK ISTETGEEPRADIVFSIKGEEKRASATGSGPVDAIFKAIESVAQSGATLQIYSVNAVTQG TESQGETSVRLARGNRVVNGQGADTDVLVATSKAYLSALSKLEFGAAKPKAQGSGTI >gi|289656366|gb|ADEA01000001.1| GENE 70 74704 - 79923 5814 1739 aa, chain + ## HITS:1 COG:CAC2687 KEGG:ns NR:ns ## COG: CAC2687 COG0514 # Protein_GI_number: 15895945 # Func_class: L Replication, recombination and repair # Function: Superfamily II DNA helicase # Organism: Clostridium acetobutylicum # 282 666 9 367 714 259 38.0 3e-68 MTSPAPAVLIIDLEVNPKTDAVFKLGAYRPDLELGYERAVRNIKGFREALLEMEYLANGA HWLMGHNILAHDLRYLKEAAPDLPWLSLPVLDTLRLSPLAFPQNPYHRLIKNHKIISSSL NSPEADCRACWQLFQDQCAAFGNLKTRHPDAYRVYGTLFGALPYKVSDDIVIPEKPLQDN AYDLLPQIWDMVQDDVETGRLKVCKTRFTRLMREDIHRPELYIPLAYALSWLSVSGGNSV LAPWVRHQFPDTARLIAELRDHDCGDAGCRYCCDTLNPVSQLKRYFGFASFREVDGVTGG QQAIVKAGMNGEHVLAVLPTGGGKSLCFQLPALNRYYRNGGLTVVVSPLQSLMKDQVDNL KAKGRTDVDTLNGMLSVTERADVLDRVALGDVGILFVAPEQFRNTSFIKAIEHRQINGWV FDEAHCLSKWGHDFRPDYLYAAKFIAKRNRNGAAAAPVSCFTATAKPDVLQEITEHFREE LGIEFKQFIGGNERSNLFYEVLEVSDDLKNRYIDELLHRELDHQDGGAVVFVARQKSAEK YAEFLKRQGWDCEYFHAGLQANAKAEIQDDFIHDRLRVIVATNAFGMGVDKPNVRLVVHA EITGSLENYLQEAGRAGRDQKEAKCVLLFDRSDVDTQFRLSRFSQLEQRDLQSVWRKLKL LNRTVSGKAEDDAIVVTGGEILRDTEGYMSFDSDDRQADTKVKAALAWLERADLLERSEN QTRIFPSRSGRLNLDQAWDIIAKANLGQRKTDLYRTIAEIVFNADDDAPLSTDVLAQATA CSFAELRGHLKKLEELGVLVNDTKMTVNLRTDHSKPSEKRLELIIGHEEKLWQILNEKIP DADRGIWQNLSLTAVCREMHDMGCETVPADIKLLMQSLAYDKAAAETRSSGSFDIIDKGN DMLLLRFKDKQSTWAQLRENAALRRHICMSLLPLLISKTGGIRSKDAVVETSFGELEQHI GDDLALAAQIPENRREILLKQALLFMHKLGVIKLNHGMTILRHAMTIRLDHNALEQKRQY LKADYRPLEIFYGEKRFQIHVMQEYALCALKNLQNGWELVSDYFKTSEKDFKNKWFKGRL KELEESISPQTLHTITDGLNAIQKAVVTGKQENRLVLAGPGSGKTRVIVHRTAYLLKAEH VNPASVIILTFNRLAAQEIKRRLFELVGSLAAAVTVLTYDGMAMRLLGVRFDGKKEYEEG QFKKWCREAAAMLSGGLSADADSDDARDRIMAGFRYILVDEYQDITEEHYELVSALAGRK REDEDEKLTIIAVGDDDQNIYAFNGTSNEYIHRFLQDYGVKQPDFLTFNYRSTQNIISAA NRLIQDMGGRLKTLHPIVINPERQHQPNGGIWSERDGERQGRVRVVKLPSQGSRQQKNNI QAQAVAAEIRRLQALADIEYRSIAVLSRNNGELKSMQAWCEQNNIPYFLAKDRKHGIRLR HTREFVRLVEQLVPDKQQEGQKEKTFTGNEFAELIRSQDAGGMWQDYFRQTAQDFLRENT ADTGYPAAFLKNWLYEYVGNESESRSDGIFLGTAHSVKGLEFKHVFVLDGGWNSADESEQ RLYYVAMTRAIETLTLIQNTPQHLWIGRLPEETECVERGYTVLPELDTEYRTLSLYSDKK EKRPAELDIGFIARETRNASDLISRLEAAKKLKVGDALTIRRGGWQNKQYEFCTDGIAVA RTAKNAGFPELDAVSDLSAIRVRAAAFGVRYREDEQYTDNIPKKIQKWPLVIPMLIIPK >gi|289656366|gb|ADEA01000001.1| GENE 71 80089 - 80259 173 56 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298368403|ref|ZP_06979721.1| ## NR: gi|298368403|ref|ZP_06979721.1| hypothetical protein HMPREF9016_00066 [Neisseria sp. oral taxon 014 str. F0314] # 1 56 2 57 57 99 100.0 5e-20 MQAVKDYGATLIYAYRTLRSIVIRPPQNVPLQDAAAHFEQVKGVLTVNQDQITPLY >gi|289656366|gb|ADEA01000001.1| GENE 72 80483 - 81541 1819 352 aa, chain - ## HITS:1 COG:NMA1243 KEGG:ns NR:ns ## COG: NMA1243 COG1613 # Protein_GI_number: 15794178 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type sulfate transport system, periplasmic component # Organism: Neisseria meningitidis Z2491 # 10 352 7 351 351 479 71.0 1e-135 MNARIFSLAAIGTALALSACSPKSGQNTAAESSAPAADGGKGIKLLNVSYDVARDFYKEY NPLFAKEYQAKHNGETVDIQQSHGGSSKQALSVANGLAADVVTMNQTSDIELLEQKGLIK PDWAKRLPDNAVPYTSTTVFLVRKGNPKQIKDWPDLTKNGVQIVIANPKTTGNGRYAFLG AYGYGLKANNGDENKAKEFAAALLKNAPVFENGGRAATTTFSQRNIGDVLITFENEANHV SKKLAPNQFEIVYPSYTILSESPVAAVDSVVEKKGTRAAAEEYLQYLWSKPAQELAAKLY LRPRDAEVLAAHKADFPEIETFSPNEKFGPWEGIMKKYFSDGGLVDQLSPKK >gi|289656366|gb|ADEA01000001.1| GENE 73 81753 - 82949 2175 398 aa, chain - ## HITS:1 COG:NMA1718 KEGG:ns NR:ns ## COG: NMA1718 COG0282 # Protein_GI_number: 15794611 # Func_class: C Energy production and conversion # Function: Acetate kinase # Organism: Neisseria meningitidis Z2491 # 1 398 11 408 408 699 88.0 0 MTQKLILVLNCGSSSLKGAAIDNDSGEVLLSCLAEKLNLPDAFVTFKANGEKHKVDLSAK PNHTGAVEALMEELKAHGLDSKIGAIGHRIVSGGELYSESILVDDEVIAGIEKCIPLAPL HNPAHLLGLRAAQSIFKGLPNVVVFDTAFHQSMPKHAYTYAIPQELYRKYGLRRYGAHGT SYRFVADETARFLGKNKEDLRMVIAHLGNGASISAVAGGKCQDTSMGLTPLEGLVMGTRS GDIDPAVFGFLAENANMTIAQITDMLNKKSGLLGLSGLSNDCRTIEEEAAKGHEGAILAM EVFVYRLAKYVGSMAVAAGGLDALVFTGGIGENSELIRSKVLGYLGFLGLTEDHEANLKA RFGNAGVITTADSKAVAVVIPTNEELMIAHDTARLSGL >gi|289656366|gb|ADEA01000001.1| GENE 74 83207 - 83521 427 104 aa, chain + ## HITS:1 COG:no KEGG:NMC1446 NR:ns ## KEGG: NMC1446 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 104 1 99 99 112 53.0 5e-24 MHYFSIHTQQGGHLGFFVMLADDGAEAGPKGGRFAVKLQSENPSGGPQADMLRSLEQEGK PLLWRVEKDRVELFCGGRNIGSIRNEYLTLLGHSLVLNDLTGTI >gi|289656366|gb|ADEA01000001.1| GENE 75 83522 - 83713 202 63 aa, chain + ## HITS:1 COG:NMA1716 KEGG:ns NR:ns ## COG: NMA1716 COG3197 # Protein_GI_number: 15794609 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein, possibly involved in nitrogen fixation # Organism: Neisseria meningitidis Z2491 # 1 59 2 60 62 100 88.0 6e-22 MESMFILVPISIILAFVIGYFFWWSGKNGQFDDLEGPAHRILMDDDSTDKLIDKDDNDDP EKR >gi|289656366|gb|ADEA01000001.1| GENE 76 83694 - 85010 1841 438 aa, chain + ## HITS:1 COG:NMA1715 KEGG:ns NR:ns ## COG: NMA1715 COG0477 # Protein_GI_number: 15794608 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Neisseria meningitidis Z2491 # 1 427 1 427 436 625 79.0 1e-179 MTQKKDNLNFATSRRFAPLFGTQFLGAFNDNLFKTALFVMISFYGLGKNDFLPPSQMLNL GALLFILPYFLFSAFSGQLSTKFDKAVLARWVKVLEIAVMGMAAYGFLIQSAPLLLFCLF CMGTQSTLFGPLKYAVLPDYLNDKELIMGNSLIESGTFIAILFGQILGTSVAGVPPYVVG FLVVLTAMLGTAASLFMPSVAAKDPATKIEPNIARSTAGLMRETASQREVFTAIIGISWF WFVGSVYTTQLPTFTQIHLGGNDNVFNLMLALFSVGIAAGSVLCAKLSHERLHLGLVTVG TCGLTACGLLLVWLTHGQRFTSLNGVFWFLSQGNAYPVMLVMTLIGFFGGFFSVPLYTWL QTASSETFRAHAVAANNIVNGVFMVSAAVLSAVLLMLFNSIALLYLAVALGNIPLMVYLA KREKQFLKDVKGYLGISE >gi|289656366|gb|ADEA01000001.1| GENE 77 85132 - 86121 1091 329 aa, chain + ## HITS:1 COG:NMB0769 KEGG:ns NR:ns ## COG: NMB0769 COG0470 # Protein_GI_number: 15676667 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication # Organism: Neisseria meningitidis MC58 # 1 321 1 320 325 441 66.0 1e-123 MIYPWHQQQWRQIAEHWQNRPNAWLFTGRENTGKTEFARFTAQALLCETPKDNHEPCGTC TSCHLFAQKSHPDFYELTPEIPEGEAVGRKLLQIKIDAVRGIVDGIHLTSVRGGLRVVLV HPAEGMNLQAANSLLKVLEEPPEHVVFLLVTHARDKLLPTIKSRCRQMVLPPPSHSQALH YLRERGVAQAEALLAFHSGAPLFEHAPESDELRAELLRLLAAPRLLAILDYAAAFDRQKQ PLAVFIGWMQKWLLDVGLAQQKMPPLYYPEYAAQSADTAARTEAAALFALAGRLNALSPY GYHTLSVRMQLEYLLTDYLEFWQNKRVTP >gi|289656366|gb|ADEA01000001.1| GENE 78 86118 - 86468 564 116 aa, chain + ## HITS:1 COG:NMA0981 KEGG:ns NR:ns ## COG: NMA0981 COG3215 # Protein_GI_number: 15793938 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein PilZ # Organism: Neisseria meningitidis Z2491 # 2 116 3 116 116 150 61.0 4e-37 MNATDLPGKMMSLQLKEKAMLYNCYMPFLEHGGLFVPTDDIFSLGDEVLLAVEIIDHPKK FLRTQVAWINPARTSAHRPKGVGLAFGTDEICIQTKQLIEAELGNVLRSDRATFTL >gi|289656366|gb|ADEA01000001.1| GENE 79 86483 - 87256 930 257 aa, chain + ## HITS:1 COG:NMA0982 KEGG:ns NR:ns ## COG: NMA0982 COG0084 # Protein_GI_number: 15793939 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Neisseria meningitidis Z2491 # 1 254 1 254 259 428 78.0 1e-120 MYLIDSHCHLNFDGLADRLPEVFANMRAQQVGQALAISVSRESFAEVFAIAENNGHIFCT IGVHPDRRDAAEFSVTEMVAQARHPKVVGIGETGLDYYWCKGDLAWQHRRFADHIQAANE AGLPVVVHTRDAAADTLRLLKECNTRAGVIHCFSEDVAFAKAALDLGLYISFSGIVTFKN APLIQEAAKYVPADRMLVETDSPFLAPVPKRGKPNEPSYVRYTAEFLAKLRGETLEQVAE TTTENFYRLFSKVPRIA >gi|289656366|gb|ADEA01000001.1| GENE 80 87313 - 87564 434 83 aa, chain + ## HITS:1 COG:NMA0983 KEGG:ns NR:ns ## COG: NMA0983 COG3042 # Protein_GI_number: 15793940 # Func_class: R General function prediction only # Function: Putative hemolysin # Organism: Neisseria meningitidis Z2491 # 12 81 3 67 68 69 48.0 2e-12 MKKALVLSAAVAVTLAACSAADNPNPQEEQPVVGVANPASEFCVRQGGRLEPKKDAQGNE YALCHLPDGTVAEEWEYFRKHSK >gi|289656366|gb|ADEA01000001.1| GENE 81 87717 - 88391 853 224 aa, chain + ## HITS:1 COG:NMB0759 KEGG:ns NR:ns ## COG: NMB0759 COG2836 # Protein_GI_number: 15676657 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis MC58 # 1 222 21 242 242 253 72.0 1e-67 MNGDITLLTLFLLGFFGGGHCVGMCGGLSSAFALQLPPGLNRAGLIVLLNLGRISSYVFI GLLVGAIGQIGISLDQTRWLQNGLYLSANLLLLFLGLYLAGISSLATRIESIGRPVWKRL NPLLNRLLPIQSVPACFGVGMLWGWLPCGLVYSASLYALGSGNALEGGLYMLAFALGTLP NLLAMGLFAAQLKNFLQRKTVRLAAGLLVAAWALWRLVSFYVAF >gi|289656366|gb|ADEA01000001.1| GENE 82 88462 - 89268 1015 268 aa, chain - ## HITS:1 COG:NMA1533 KEGG:ns NR:ns ## COG: NMA1533 COG0730 # Protein_GI_number: 15794426 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Neisseria meningitidis Z2491 # 1 268 1 268 268 296 64.0 3e-80 MWPLEIIAAMLAVGSLAGFIAGLLGVGGGTIIVPVVLWALQLQGIGNHPYAQHLAVGTSF AVMLFTTLSSVAAQHKKQSIDWQTVMRMTPGMTAGVLIGAASAKYMPTAGFQVFFIAFIS IIAVRTLVGIKPKPSRTLPRLAGLNATGVLFGAVSSWVGIGGGSLSVPFLIYCNMPPHKA VGTSSGLAWPIALAGTVGYLAAGRHISNLPDGAVGFLYLPAVAILSIATIVFAPLGVKTA HKLPPETLKTAFGLLLLAIAARMLWKMV >gi|289656366|gb|ADEA01000001.1| GENE 83 89272 - 90051 1136 259 aa, chain - ## HITS:1 COG:NMA1532 KEGG:ns NR:ns ## COG: NMA1532 COG1183 # Protein_GI_number: 15794425 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine synthase # Organism: Neisseria meningitidis Z2491 # 11 258 1 247 248 404 89.0 1e-113 MRTNGIIMENMENPKNPTPPRHSLRQNSIYLLPNSFTVAALFSAFFAITQSMHGRYETAA IAVFISMLLDGMDGRVARWTNSQSAFGEQLDSLADMVSFGVAPALIAYKWQLWQFGRIGY SIAFIYCACAALRLALFNTLIGKVDKRWFIGVPSPTAAALIVGLIWVNHSVERFPAVQWW ALGITLFAGISMIVQIPFWSFKEINIRRKVPFMGMVLAVLILLLITWEPSLVLFLFFFGY SLSGYVMAVCRWFKKRKAV >gi|289656366|gb|ADEA01000001.1| GENE 84 90254 - 90763 880 169 aa, chain - ## HITS:1 COG:NMA1002 KEGG:ns NR:ns ## COG: NMA1002 COG0652 # Protein_GI_number: 15793958 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family # Organism: Neisseria meningitidis Z2491 # 1 169 1 169 169 324 96.0 6e-89 MIILHTNKGDIKIELDFDKAPVTAKNFEQYVKDGFYDGVIFHRVIKGFMIQGGGMDENMN EKETREPIQNEASNGLPNEKYTVAMARTSDPHSASAQFFINTADNAFLNFRSKELYGKTV VQDWGYAVFGKVVDGFDVVDAIEGVATKRHGYHDDVPTEPVVITKAEAV >gi|289656366|gb|ADEA01000001.1| GENE 85 90871 - 92286 2157 471 aa, chain - ## HITS:1 COG:NMB0792 KEGG:ns NR:ns ## COG: NMB0792 COG0471 # Protein_GI_number: 15676690 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Neisseria meningitidis MC58 # 1 471 1 471 471 699 89.0 0 MDLHSKDKTQHPENVELLSAQPPITDFKGLLTTIISAVVCFGIYHILPYSTDANKGIALL IFVAALWFTEAVHITVTALMVPILAVVLGFPDTDIKKAMAGFADPTIYIFFGGFALATAL HMQRLDRKIAVSLLRVSRGNMKVAVLMLFAVTAFLSMWISNTATAAMMLPLAMGMMDHLD KEKDRKTFVFVLLGIAYCASIGGLGTVVGSPPNMIAAKALNLDFVGWMKLGLPMMLLILP LMLFSMYVILKPNLNERVEVKAESIPWTLHRVIALLIFIAAAVAWVFSAKIKEVFGISNP DTVIALIAAVAVVVFGVAQWKEVARNTDWGVLMLFGGGISLSALLQSSGASEALGQQVAT TFTAAHPLLVIFVVAAFIIFLTEFTSNTASAALLVPIFASIAAQMGLPEQVLVFVIGIGA SCAFMLPVATPPNAIVFGTGLIKQREMMNVGLLLNVLCIVLVAMWAYLILM >gi|289656366|gb|ADEA01000001.1| GENE 86 92580 - 93581 1709 333 aa, chain - ## HITS:1 COG:NMA1011 KEGG:ns NR:ns ## COG: NMA1011 COG0113 # Protein_GI_number: 15793967 # Func_class: H Coenzyme transport and metabolism # Function: Delta-aminolevulinic acid dehydratase # Organism: Neisseria meningitidis Z2491 # 1 333 6 338 338 580 90.0 1e-165 MNFPPRHVSATRMRRMRKDDFSRRLMREHTLTADDLIYPVFVLEGSNQEEAVPSMPGVKR QSLDKLLFTAEEALKLGIPMLALFPVVTRNKTDLAEEAYNPEGLVPTVVRTLREKFPELG IMTDVALDPYTIHGQDGLTDANGYVLNDETIEVLVKQALCHADAGAQVVAPSDMMDGRIL AIREALEDAGHIHTRIMAYSAKYASAFYGPFRDAVGSSGNLGKADKKTYQMDPANTDEAL HEVALDIQEGADMVMVKPGLPYLDVVRRVKDEFGVPTYAYQVSGEYAMLQAAIQNGWLDG EKVILESLLAFKRAGADGILTYYAVEAAKQLRK >gi|289656366|gb|ADEA01000001.1| GENE 87 93710 - 94432 1144 240 aa, chain - ## HITS:1 COG:NMB1768 KEGG:ns NR:ns ## COG: NMB1768 COG3210 # Protein_GI_number: 15677610 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Large exoproteins involved in heme utilization or adhesion # Organism: Neisseria meningitidis MC58 # 35 211 2316 2491 2514 63 29.0 4e-10 MKPIKHLIITSILAASLAGCTTYQHDQSRRSKIAQFIINHPVAARTIGVEDYKSVNISSN AARLAKRTGLDNKANGEGRGTQVNAVRHTLWQAAISSQFDSIIAERAGDAYLSDTEVREG KTDYFSRLAADQAVDIRNNRIGRSIGSGKPQADMKTLAQAVLFYYKQVGLWTAAQVKGGS GRKVWRISQNKLSDAEYRRALNNLEVLNSDGMTPFEERLYNPSKLREIKKSVEAIGNVQD >gi|289656366|gb|ADEA01000001.1| GENE 88 94578 - 95081 859 167 aa, chain - ## HITS:1 COG:NMB1383 KEGG:ns NR:ns ## COG: NMB1383 COG1076 # Protein_GI_number: 15677246 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-domain-containing proteins 1 # Organism: Neisseria meningitidis MC58 # 1 166 1 166 166 216 74.0 2e-56 MSQYFTLFQLEPQFDIDTDSLEQNYRTLAARFHPDRFASASAFEQKQAVMMSSTINEAYR TLKNPTDRAAYLLRQQGIDADAPEHTSFAPEFLMQQMEWRETLAEARGGQDQTALPALDK EISGAQQELWQDLREAFRRQQYEDAAQLVRQGRFLDKLKKEISNLLQ >gi|289656366|gb|ADEA01000001.1| GENE 89 95183 - 95503 654 106 aa, chain - ## HITS:1 COG:NMB1381 KEGG:ns NR:ns ## COG: NMB1381 COG0316 # Protein_GI_number: 15677244 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis MC58 # 1 106 21 126 126 201 91.0 2e-52 MITITENAAKYINNYLTKRGKGLGVRLGVKTSGCSGMAYNLEFVDEASAEDLVFEEHGAR IYIDPKSLVYLDGTQVDYTKEGLQEGFKFENPNVKDSCGCGESFHV >gi|289656366|gb|ADEA01000001.1| GENE 90 95514 - 95762 414 82 aa, chain - ## HITS:1 COG:no KEGG:D11S_0049 NR:ns ## KEGG: D11S_0049 # Name: not_defined # Def: hypothetical protein # Organism: A.actinomycetemcomitans # Pathway: not_defined # 1 76 15 90 92 93 57.0 2e-18 MAFTEAQTQSLLAVKGIGKTVLQRLQQMGLDDVAELAAADAGEILQQGAALTGSSCWKNS PQAKAAIEAAVAWAKAQQNSNP >gi|289656366|gb|ADEA01000001.1| GENE 91 95835 - 96221 706 128 aa, chain - ## HITS:1 COG:NMB1380 KEGG:ns NR:ns ## COG: NMB1380 COG0822 # Protein_GI_number: 15677243 # Func_class: C Energy production and conversion # Function: NifU homolog involved in Fe-S cluster formation # Organism: Neisseria meningitidis MC58 # 1 126 1 126 128 236 97.0 1e-62 MAYSDKVIDHYENPRNVGTFDKGDDSVGTGMVGAPACGDVMRLQIKVNDEGIIEDAKFKT YGCGSAIASSSLITEWIKGKSLDDALAIKNSEIAEELELPPVKIHCSILAEDAVKAAVAD YRKKKEAQ >gi|289656366|gb|ADEA01000001.1| GENE 92 96291 - 96419 327 42 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNEQDLDLDNLDNLLEDFDGVTVEGGVDSENDDGCEGGACKI >gi|289656366|gb|ADEA01000001.1| GENE 93 96538 - 97356 247 272 aa, chain - ## HITS:1 COG:no KEGG:SUN_1444 NR:ns ## KEGG: SUN_1444 # Name: not_defined # Def: hypothetical protein # Organism: Sulfurovum_NBC37-1 # Pathway: not_defined # 1 272 1 272 272 278 49.0 2e-73 MPVRSKEFHEYILNHGCTTHVGHNDYLIAPASAFLKYTIETKDAVQLCIDHFPKKQDGNY KKASADALQHFVQAMLPTVMGHFETYQRYLFAGAFERSVYLKEFDISNVQKNLRNATQID INFSKLAAYRNFSNISVGFLLADAMNDWHNPNSVNSYFKIFTGKGNIYEPDVINKLKVLW QLRHSIVHTGGTLTQVDSQKVLELNTFGDKYIFLEKQFTFELARKFHKIVKASTNTLKTA FMGRLISNISKVDRDNIEKFFEVKSSCHVWLR >gi|289656366|gb|ADEA01000001.1| GENE 94 97449 - 98663 2139 404 aa, chain - ## HITS:1 COG:NMA1594 KEGG:ns NR:ns ## COG: NMA1594 COG1104 # Protein_GI_number: 15794487 # Func_class: E Amino acid transport and metabolism # Function: Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes # Organism: Neisseria meningitidis Z2491 # 1 404 1 404 404 786 97.0 0 MTVKTPVYLDYAATTPVDKRVAEKMIPYLTETFGNPASNSHAFGWEAEEAVEKARADIAA LINADSKEIIFTSGATESDNLAIKGAANFYKTKGKHLITVKTEHKAVLDTMRELERQGFE VTYLGVKENGLIDLEELKAAIRDDTILISVMWVNNEIGVVQDIPAIGEICRERKIIFHVD AAQACGKVPVDVEAAKIDLLSMSGHKVYGPKGIGALYVRRKPRVRLEAQMHGGGHERGFR SGTLPTHQIVGMGEAFRIAKEELEQDMAHYRKLRDIFLKGIEGIEEVYINGDLEHRAPNN LNVSFNFVEGESLIMAVKELAVSSGSACTSASLEPSYVLRALGRNDELAHSSLRITFGRM TTEEEVQFAAELIKSKIGKLRELSPLWEMFKDGIDLNSIEWAAH >gi|289656366|gb|ADEA01000001.1| GENE 95 98696 - 99142 687 148 aa, chain - ## HITS:1 COG:NMA1593 KEGG:ns NR:ns ## COG: NMA1593 COG1959 # Protein_GI_number: 15794486 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Neisseria meningitidis Z2491 # 1 148 1 148 148 248 91.0 3e-66 MRLTTKGRFAVTAMIDLAMNAQTGAVKLSAISERQSISLSYLEQLFSKLRRAQLVESLRG PGGGYILAAPASEINIAQIIAAAEDRLDATRCGSKANCHHGAPCLTHDLWENLNKTINDY LSSVTLQSIIEQKNCNDGSQVVTFTHIH >gi|289656366|gb|ADEA01000001.1| GENE 96 99527 - 100699 1433 390 aa, chain + ## HITS:1 COG:NMA1592 KEGG:ns NR:ns ## COG: NMA1592 COG1304 # Protein_GI_number: 15794485 # Func_class: C Energy production and conversion # Function: L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases # Organism: Neisseria meningitidis Z2491 # 1 385 1 385 390 757 97.0 0 MKRDLSKMTCIEDLRLVAKRKMPRMFYDYIDSGSWTETTYRENTSDFKDIRFRQKVLVNM EGRSLETKMIGQDVKMPVAIAPTGFTGMAHADGEILAARAAEKFGIPFTLSTMSICSIED VAENTSAPFWFQLYVMRDREFMENLIKRAKDAKCSALVLTADLQVLGQRHKDIKNGLSAP PKPTIANLINLATKPEWCMKMLNTERRTFRNIVGHAKNVGDLSSLSSWTSEQFDPRLSWD DVARIKDLWGGKLIIKGIMEPEDAEKAAKSGADALVVSNHGGRQLDDTVSSIKALPDIVS AVGSDIEVWMDSGIRSGQDILKAWALGAKGTMIGRAFLYGLGAYGEEGVTRALEILYKEM DISMAFTGHRNIQDVDAGILQSTRWSEGMF >gi|289656366|gb|ADEA01000001.1| GENE 97 101033 - 102184 1364 383 aa, chain + ## HITS:1 COG:NMB0814 KEGG:ns NR:ns ## COG: NMB0814 COG3705 # Protein_GI_number: 15676712 # Func_class: E Amino acid transport and metabolism # Function: ATP phosphoribosyltransferase involved in histidine biosynthesis # Organism: Neisseria meningitidis MC58 # 1 382 1 382 383 563 75.0 1e-160 MQPWQLPEHVADILPTAARQLESAREQVLELFRVHGYELVQPPLMEYSGSLLTHIDEGLS LKTIRVADQISGRQLGIRADITPQVARIDAHLLSANEGINRLCYAGPVLHARPDGLLNTR EPLQVGAELYGFAGVAADIELIDLMLKSMGIADIGGVLLSLGHIGVFRALARAADLDEVR AARLLSLMQDKDASAVSEQVAAWRLDGMWAKAFALLPTLYGGREILARARAELPDLSAVG EALDELEAVCKAFPSQQVHVDLSELRVDEYHTGLLFAAYGSNCREAVARGGRYDGLGAYF GRSRPATGFSFDMRTFVGRLPAIKRLPLVAVAHEDAEEAEEAIGRLRAQGQCVVVDYGVG YNGSQDVSGRLKKTESGWEVFKI >gi|289656366|gb|ADEA01000001.1| GENE 98 102212 - 103510 1572 432 aa, chain + ## HITS:1 COG:NMA1024 KEGG:ns NR:ns ## COG: NMA1024 COG0104 # Protein_GI_number: 15793980 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate synthase # Organism: Neisseria meningitidis Z2491 # 1 432 1 432 432 786 91.0 0 MTKNVVVIGAQWGDEGKGKIVDWLAEETSGVVRFQGGHNAGHTLVVGGKKTVLRLIPSGI LHERLDCFIGSGVVVSPEALLGEIDELNAAGVKNVEGRLKIAPTCPLILPYHIALDQARE ASRGKSKIGTTGRGIGPAYEDKVARRAIRVVDLLRPEQLAEKLESVLAYYNVQLQHLHGA EPVKAEDVMAVIEKIAPRIVPMITDVSRVLTEKNRKGEQLLFEGAQGTLLDIDYGTYPFV TSSNCLAGAASAGAGVAPQMLDYVLGIVKAYTTRVGSGPFPTELFDEVGAGLAERGNEFG SVTGRARRCGWFDAAALKRSIQVNGISGMCITKLDVMDGIENINICVGYELPDGSKTDIL PFGADAVAGCKPVYETMPGWKESTFGVKSYDALPDNAKAYLKRIEEVCGAPVAIVSTGPD REETIVLHHPFA >gi|289656366|gb|ADEA01000001.1| GENE 99 103869 - 106154 3265 761 aa, chain + ## HITS:1 COG:HI0180 KEGG:ns NR:ns ## COG: HI0180 COG1882 # Protein_GI_number: 16272145 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Haemophilus influenzae # 1 761 3 772 772 1315 81.0 0 MSNDVQQRPAAWEGFVGGNWETNVDVRDFIQKNYTPYEGDASFLAPATEATTKLWAEVME GIKVENRTHEPYKIDAQVVSGITSHAPGYIDKDLETIVGLQTDEPLKRSIMPFGGLKMVQ DACKVYNVELNPEVSEIFTKYRKTHNQGVFDVYTPDIRRCRKSGVITGLPDAYGRGRIIG DYRRVALYGIDFLMADKFNQFNSLQADLENGVNLEEVIRRREEINDQYKALGQMKEMAAS YGYDISGPAKNAQEAIQWTYFAYLAAVKSQNGAAMSFGRVSSFLDIYIERDLKNGVITET QAQEFIDHLVMKLRMVRFLRTPEYDQLFSGDPIWATESIGGMGLDGRTLVTRTNFRVLHT LYNMGPSPEPNITVLWSEQLPQGFKEFCAKVSIDTSSIQYENDDLMRPDFNSDDYAIACC VSPMVVGKQMQFFGARANLAKTLLYAINGGVDEKSKDQVGPKTEPILDEVLDYDTVFARM DKFMDWLATQYVTALNIIHYMHDKYSYEAALMALHDRDVKRTMACGIAGLSVAADSLSAI KYAKVKPIRDENGIAVDFEIEGEYPQFGNNDDRVDDIACDLVERFMKKVATHKTYRNATP TQSVLTITSNVVYGKKTGNTPDGRRAGAPFGPGANPMHGRDVNGAVASLTSVAKLPFEFA KDGISYTFSIVPGALGKDENSRERNLAGLMDGYFHHEEGEVEGGQHLNVNVLNRETLKDA MENPDKYPQLTIRVSGYAVRFNSLTREQQQDVITRTFTETM >gi|289656366|gb|ADEA01000001.1| GENE 100 106289 - 107098 1096 269 aa, chain + ## HITS:1 COG:YPO1381 KEGG:ns NR:ns ## COG: YPO1381 COG1180 # Protein_GI_number: 16121661 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Yersinia pestis # 26 269 3 244 244 344 62.0 1e-94 MQTYTINSETHPPAKDMGHRHYQGKGIVHSVESCGTVDGPGLRYVLFLQGCLMRCLYCHN RDTWDFHTDKCQEMTVEQVMKQVMSYRHYLEATGGGVTATGGEPLLQYEFVRDWFTACRE HGIHTCLDTNGYALHYDSILEDLLDHTNLVMLDLKQIDPEIHKVLVGIPNTKTLNFARHL AERGQSTRVRYVIVPGYTDDERSAHLLGGFIGDMENVGAVELLPYHELGAHKWALCGDEY KLKGVHPPPKEVVLKIKEILEGYGKSIIY >gi|289656366|gb|ADEA01000001.1| GENE 101 107547 - 109523 2567 658 aa, chain - ## HITS:1 COG:PA3790 KEGG:ns NR:ns ## COG: PA3790 COG1629 # Protein_GI_number: 15598985 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Pseudomonas aeruginosa # 27 658 61 723 723 416 37.0 1e-115 MRRPSLLVLPLVLAVSQAWADTEPVAEETVTLSPVTVTGTQQQKANSITFNPKAALQPLP AGDGADLLQSVPNMSIIRKGGSSGDPLFRGLGGSRLSVNADDQFIYGGCGMRMDPPTAYI HPNSFDKVVVTKGPQTVTQGMGLVSGSVQFIRKDPDFSEKPYNVNATLTAGSNDRRDGSL EAEFGGKYGYVRSNISHNEADDYKDGDGKRVHSNFKRDSQMLQLGVTPTENTTIAGTYER SRAKVAYADRMMDGSKFDRDAWNVRFTQRNLTPWFSELELRYGKSEIDHVMDTYSLRTIR NPAGMQIKNANNPKRNTDTGRLKATFDWDKLNLQTGLDYLDDVHVVRNERGGDGYRHKPY MPNQSFKQWGIFTEAAWQQTDKQRWVAGLRHDQVKAHYDTASVTDPVLKHQKFNLDSGFL RWERNTDNGLKYYAGFGIAERAPDYWERLRSEKKAIHAEQNRQIDAGIIWKRPNLHVSVS VFGSDVKNFILMERQGMNLGVRNINASRFGGEAEVKWTFAPNWEIGSSLAYTYGKNRTDG KPLAQTPPLEWNNTLAFDNGKFSAGALWRVVAKQNRYSKGQGNIVGQDIGASSGFGVLSL NAGWKFSKYATLQGGIDNVFNKTYAEFVSRGGDPSAGTQTLRVNEPGRTAWLRLQAKF >gi|289656366|gb|ADEA01000001.1| GENE 102 109818 - 110891 1661 357 aa, chain - ## HITS:1 COG:NMB0879 KEGG:ns NR:ns ## COG: NMB0879 COG1118 # Protein_GI_number: 15676775 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type sulfate/molybdate transport systems, ATPase component # Organism: Neisseria meningitidis MC58 # 1 357 1 357 357 691 95.0 0 MSITIQNLNKHFGNFHALKNINLNVPTGKLVSLLGPSGCGKTTLLRIIAGLENADGGNIL FDGQDVTAKHVRERKVGFVFQHYALFRHMNVFDNVAFGLTVLPKSERPSKEQIRAKVEEL LKLVQLSHLAKSYPHQLSGGQRQRIALARALAVEPKLLLLDEPFGALDAKVRKELRTWLR DIHHNLGVTSILVTHDQEEALEVSDEIVVMNHGKIEQTGSAEAIYRKPENAFVTEFLGET DAFEGRIEKGIWHYNGFAWKLDAQYKWQEQTATGYIRPHEWQIAAEHETPMIRAEIEKIH AVGALTHVLVKHGKQDVHITLAGSDASRLDLSAGRELALVPKQIYVFSQNELIEYSI >gi|289656366|gb|ADEA01000001.1| GENE 103 110888 - 111748 1444 286 aa, chain - ## HITS:1 COG:NMA1098 KEGG:ns NR:ns ## COG: NMA1098 COG4208 # Protein_GI_number: 15794046 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type sulfate transport system, permease component # Organism: Neisseria meningitidis Z2491 # 1 285 1 285 286 449 96.0 1e-126 MKPYSANPNLTEPRWLRVLLTAVALGFLLLMLVVPLVAVFYEALKGGWDLYLQSLTDPEA WAAIKLTLITAAVVVPVNAVLGVAMAWLLTRFDFRGKQLLTTLLDLPFSVSPVVAGLMFV LLFGAHTALGGWLEAQGIQIIFAIPGIILATLFVTFPFVAREIIPLMQAQGDSEEQAALI LGASGWQMFWRVTLPNIKWALLYGIILTNARAMGEFGAVSVVSGHIRGETNTIPLLVEIF YNEYNFTGAFALSGVLALLALATLAVQNIITKLQDKKLAAAERNAA >gi|289656366|gb|ADEA01000001.1| GENE 104 111854 - 111943 103 29 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTAVISVLSRPTGEGYSIYTKNIVTTFFS >gi|289656366|gb|ADEA01000001.1| GENE 105 111936 - 112055 62 39 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNKCSFLKELYEYRVSIAIGLATIIGFLAGIAVGLNSLN >gi|289656366|gb|ADEA01000001.1| GENE 106 112235 - 113071 1164 278 aa, chain - ## HITS:1 COG:NMB0881 KEGG:ns NR:ns ## COG: NMB0881 COG0555 # Protein_GI_number: 15676777 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type sulfate transport system, permease component # Organism: Neisseria meningitidis MC58 # 1 278 1 278 278 437 97.0 1e-122 MLLLKTPSVLPGFKISLGLTVLCLSLLVALPFAMMAAKAAEIGWGGFWNTIAEPNVLAAV WLSLRMSFYAMLTNVVFGTLVAWVLVRYEFPGKGLVNALVDLPFALPTAVTGIALATLYA PNGWIGRFFEPLGIKIAFTPVGIWIALVVVSLPFIVRAVQPVLEELSGEYEEAAATLGAN RFTTFRRVLLPEITPALLTGAGMMFARATGEYGSVIFIAGNIPMVSEILPLIITGKLEQF DVQGASAVALFMLLVSFVILFALNVMQWALSRRSGAKG >gi|289656366|gb|ADEA01000001.1| GENE 107 113308 - 114816 2462 502 aa, chain - ## HITS:1 COG:NMA1679 KEGG:ns NR:ns ## COG: NMA1679 COG0248 # Protein_GI_number: 15794572 # Func_class: F Nucleotide transport and metabolism; P Inorganic ion transport and metabolism # Function: Exopolyphosphatase # Organism: Neisseria meningitidis Z2491 # 1 500 1 500 502 833 80.0 0 MTAIPTNVLASVDLGSNSFRLQICENHNGQLKIIDSFKQMVRFAAGLDEQKNLSEESQER ALECLAKFGERLRGFQPEQVRVVATNTFRVAKNIGRFIPKAEAALGFPIEVIAGREEARL IYTGVVHTLPPNGDRMLVIDIGGGSTEFVIGSDLRPTHTESLPLGCVTYSMRFFQNKIGN KDFQAAIAAARNEIQRISKLMKRAGWDFAIGTSGSAKSIRDVLAAEYPQEADITYEGMKK LAERITAAGSVKKAKFENLKPERVEVFTGGLAVMMAAFEELEIRKMTVTEAALRDGVFYD LIGRSLNEDMREQTTAEFQHRYHVSLNQANRVADTAQKFMESLCHEHNVPVQSLTLWKQY LSWAGRLHEIGLDISHTGYHKHSAYILENADMPGFSRKEQSVLAQLVLGHRGEVRKMTEI VGSNEMMWYAILSLRLAALFCRARMPLELPPFTQLRPDSTGKGFMLRISRNWLEQHPLIG DALAYESTQWQKIDMPFGVQLQ >gi|289656366|gb|ADEA01000001.1| GENE 108 114996 - 115625 808 209 aa, chain + ## HITS:1 COG:NMA1674 KEGG:ns NR:ns ## COG: NMA1674 COG0741 # Protein_GI_number: 15794568 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Neisseria meningitidis Z2491 # 10 208 9 206 207 320 86.0 8e-88 MEKNILIQSPVSLQRRRLLLAGGALLLSPSLALAGAQREETLSDDVASVMRGSINNVNPP RLVFASAQEGERWLSAMSSRLARYVPDEGERRRLLVNIQYEASRAGLDPQVVLGLIEVES AFRQYAISGVGARGLMQVMPFWKNYIGKPSHNLFDIRTNLRYGCTILRHYNNLENGNLYR ALARFNGSLGSGKYPNAVLGAWRNRWQWG >gi|289656366|gb|ADEA01000001.1| GENE 109 115796 - 117178 1766 460 aa, chain + ## HITS:1 COG:NMA1673 KEGG:ns NR:ns ## COG: NMA1673 COG0477 # Protein_GI_number: 15794567 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Neisseria meningitidis Z2491 # 1 460 2 461 461 664 81.0 0 MARQNHTQMFPSEWRAGVTLSGVYALRMLGMFLVLPVLSLYAASLPGAENNKTLVGMAMG IYGLTQAALQLPLGIASDKFGRKKVIYVGLIVFAAGSFLAAAADSLHMLVAARAVQGAGA VSAAVTALLADLTRDEVRTRAMAMIGLSIGLTFSVSLVLAPVIADFIGVPGLFMLTGALT VSSIAVVAWMTPNPEVSKFHEDAQTQPSRMGEVLKNRQLLTLDFGIFALHAAQMALFTAL PFALENLGLMKIQHWKVYLPSTVTGLIVMVPLIIVGETRGKLKQVFVLGIACIALAQAGL LFGLHSVWLITGYLVVYFIGFNVLEASLPSMVSKIAPPDLKGTAMGVYNALQSVGLFVGG ASGGLLFQHYGFASIFAFCCVLMGVWLLIALCSPAPNPVKNISMPVGTQWRGNTDLLFRA LSELDGVESVAFSADRQTVYIKALQKGFDQEAAEKIISGV >gi|289656366|gb|ADEA01000001.1| GENE 110 117184 - 117714 767 176 aa, chain + ## HITS:1 COG:NMA1672 KEGG:ns NR:ns ## COG: NMA1672 COG0629 # Protein_GI_number: 15794566 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Neisseria meningitidis Z2491 # 1 176 1 174 174 256 81.0 1e-68 MSLNKVILIGRLGRDPEVRYMPNGEAVCNFSVATSETWNDRNGQRVERTEWHNITMYRRL AEIAGQYLRKGSQVYLEGRIQSRKYQGKDGIERTAYDIIANEMKMLGGRNDNSGGAPYDD GYQHQQGGYQQAQQQQYQSAPAYQQEAPSAPPAAPRRQAPAAPAAPVEDIDDDIPF >gi|289656366|gb|ADEA01000001.1| GENE 111 118018 - 118158 98 46 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MITGAGRVGALGFETTCQLAKLNFHVVLTVRKAEQSEARARELQKV >gi|289656366|gb|ADEA01000001.1| GENE 112 118223 - 118948 232 241 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 44 237 47 238 242 94 32 4e-18 MVLNNKGTLHTQKSGQLFRLFYKPSPTASIIKPCSFKETASLHGNISYIVADVGKTEDVT RVLTEIKQKFSRLDISVNNAGMAPVTPITEQTLTEFDAVFNINVRAVVDLTTQALPLLKE IKGSIINIRSAVANQPLPNMSIYSSSKAALKTLTFVWAKELAKDGIRVNNIAVGPIETPI YEKTELSTEEAQAHKDRITSLVPLGRFGQPKDISAIVALLVSEEGSFITGTDIAVDGGFG I >gi|289656366|gb|ADEA01000001.1| GENE 113 119115 - 119900 702 261 aa, chain + ## HITS:1 COG:CC2958 KEGG:ns NR:ns ## COG: CC2958 COG3384 # Protein_GI_number: 16127188 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Caulobacter vibrioides # 1 260 1 255 256 236 45.0 3e-62 MKKMPVLFAGHGSPMNVLDKENPFNQNLSLITQKFAKPKAILMISAHWYSSRLQVTSGEH PEMIYDFYGFPEELSQVQYPAPGSPELAEQVRSLLQPENVELNPTRGFDHGTWTVLKFLY PDADIPVVQLSLNRLQSAEWHFKLAKKLSALREQGVLIIGSGNIVHNLRVISWEHIDQIG AGYDWAYAFRDQINHAMTTQNNNELVHYEQFGENAALSVPTPDHYLPLLYVMALREHDEK VEFFNDNLIAGSLSMTSVLVN >gi|289656366|gb|ADEA01000001.1| GENE 114 119902 - 120099 150 65 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298368442|ref|ZP_06979760.1| ## NR: gi|298368442|ref|ZP_06979760.1| hypothetical protein HMPREF9016_00105 [Neisseria sp. oral taxon 014 str. F0314] # 1 65 1 65 65 120 100.0 3e-26 MNATLYIETNKLVLQWGGLVAEIPLSIADLEAQFTPYPPTKITWESAIMQVEDAISPSIY MREKC >gi|289656366|gb|ADEA01000001.1| GENE 115 120030 - 120329 247 99 aa, chain + ## HITS:1 COG:HI0321 KEGG:ns NR:ns ## COG: HI0321 COG4456 # Protein_GI_number: 16272274 # Func_class: S Function unknown # Function: Virulence-associated protein and related proteins # Organism: Haemophilus influenzae # 22 99 1 78 78 100 66.0 4e-22 MGKRHYAGRRCDFAKYIHERKMLTKVFQSGNSQAVRIPLGFRFQTDTVEIIKAENGDIIL RPVRNKDRQFLALFDHFDDDFVAAFEDRDTAPPQERDTL >gi|289656366|gb|ADEA01000001.1| GENE 116 120326 - 120628 392 100 aa, chain + ## HITS:1 COG:HI0322 KEGG:ns NR:ns ## COG: HI0322 COG1487 # Protein_GI_number: 16272275 # Func_class: R General function prediction only # Function: Predicted nucleic acid-binding protein, contains PIN domain # Organism: Haemophilus influenzae # 1 100 1 100 134 116 57.0 1e-26 MMYMLDTNIIIYLIKKKSQSIAECVAGSSPNDHLVMSFITYDELLKGTNGSRNREKLLFS IARLTKKISVVYPDENICTYYGKRADALKRQGTLIGSNAL >gi|289656366|gb|ADEA01000001.1| GENE 117 120856 - 125838 1814 1660 aa, chain + ## HITS:1 COG:MTH1634 KEGG:ns NR:ns ## COG: MTH1634 COG1112 # Protein_GI_number: 15679629 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases and helicase subunits # Organism: Methanothermobacter thermautotrophicus # 1030 1626 114 613 642 126 25.0 4e-28 MEIQDWGGGLTQHEVEAIEKIKQAFQASENNKKVKGQGFDALKSLKSIFPWKGYSGFRFA DIKERKEGEFDLVIVTHCNVLIIELKHWNGEPITNNGLRWYKGKKDMGHSPVEITRKKMF LLKNKLEQFRGQFANSTERFPIPKIEFLVVMTGNSDFSRLSDKEKMNVISLEDFLKLADN QKFTAQFGTYTKYPDNCTLNKNFSIFDEIFCTNKNETKSISIGGYYAEDNAIFSHPKDIY QEYLAQTENKKHQDQALLRRWDFTKINCPEAQTPDGRYRLVSREYDVLNYIKLQNKDLYH ACLNYKSTPQKGEITAEHVDLFELFLQQKRFDQFVGRYNGENLSTERRLGLVQLLLDKFA QLHKIGIAHRDLGNHSIWLSADDKITLSGFATAYFSSEETVGDIREILEVSGDLAKSHFP LSDSIKLTPYQYDVRSLAVLAWHIIQAKRITSDTLDEMKNKLPDETTWYAEILREALSDV PFESSVDFLNKFNQTKPEQAVDFSFDFTKLEPFTYDINHSRAYREDDDFIVETSEKEVYC SNGLLIKAWLNADPQNDNSKARVVLNWLENMAKLASLSPDYVPKIREFGIAKKSGCLFAA SDFIDGHTWQDICKLDLSDKQKQALIHQFIQNIEHLHSLGFTHGDLKPDNVLVTIHDDSA QLHILDILDFSSSGQSQFNTEYSPEFDHPTEKQRDNFAVMKMACELLGVEWNRPSESFAN ISEAVQQECSDSQTAFISLARFKEALNPKPATPMIDITVGGRESFPPIAIYPENGELFVQ FKESQKYPNEEIDITFIGLGGKFTAFYTIAEQRFRHGLSPFERNHISRNDRDDSKCSLQI GLNITHSNYSNLDKLNDFIADSTEFKNVIIQFVQEQFFRQPEKEQAEENENFEVETVDIN TAETVIEQRPSIQKLWQAILDTETEALPSITASEALQKTENGESYISYDGEINPVDQFKR DEIVEAIGKSEDGEKTFKYGVVDIAKSQLNELHIKSKSLTNSANNIKADTPVYLQSKQNK ASYTRRKNALQRILDGESAVKNLVHYFDEHCNLPSEKYEIHVSDEEFKRYDQPEKNVSLN EAQRIAFQRLIANGPLSLLQGPPGTGKTEFIAAFVHYLFDVQKVRNILLVSQSHEAVNTA AERIRKHCQRLGADLQLVRFSNREIADSEILEDVFSPNLVGQKRAQLNVNKISNICQLGR SMGLPEDYLRKRAELAFDIGVQIRRYQKIVKSSKDETVDEDEKRLRKKLEKSIKEQAQAM ELRELVEIDEILPRFISELDHKHNIQPIENIQAGKLIDLTQDMLEALSNERTNYDEFLAR SRQLVIGTCVGIGQRHIGIADNLYDWVIVDEAARSISSELAIAIQSGTRILLVGDHKQLP PLYSEEHKNALARRLGISKRGEELDQALGSDFERVFLSEYGKQTCATLKTQYRMAPAIGS LVSACFYENVLENGKTDNDVPNIYFRLPEKIKSCVTWLDTTSLPNAYHEQGKSGSLSNRA EADVIIGILQDLANDETFMNSEPVQKCLEKNEQAIGVICMYGEQKKLIRKKFNERSWNDD FRRLVKIDSVDSYQGKENRVIILSLTRHDRVCSTGFLHLPNRINVALSRAMDKLIIVGAK TMWEHPKNSKTPLAKVLRFIQKQNNPQDYAIKILKNGAKK >gi|289656366|gb|ADEA01000001.1| GENE 118 125835 - 127217 836 460 aa, chain + ## HITS:1 COG:no KEGG:PBPRA1585 NR:ns ## KEGG: PBPRA1585 # Name: not_defined # Def: hypothetical protein # Organism: P.profundum # Pathway: not_defined # 6 459 7 471 473 215 29.0 3e-54 MSKQNITYNQIDFVVKAPRFRIVFSYMSDKGVAFVREYLLRLLKVTPCKPAQIAQYFGFS QHETEVAVADLEQHKWIIWQDNGLIALSSEGLRLFQDNQESPHIPTLKEFGGEYRMELLD SNFLKKNDCDKNRQHAIELAIEPKLLSESSEIARKTFQNRFQQLMEDDIIDLDEKDISLY KIDAIEPKGAPDYFHFTQQFELLPETGESKERHDVPILIHQENIQQAITTQLEQFSHQDN LRKLRSSVEEIGDDHTLKVLFGGQLDFTEFLKVYQKHEQQNGLYFLGQIYHQENLFEQIN KILDKLNKKSSKKLYWLAPSDIYWGKQRKIHDKIQNLIDKQKNGYEFYLYLPLPSEQNHH EKQEWLNQFRDISNKVLYGFCEGFLDGNTEILFLEDKFAVVCYHAKLSSYPVTLPIGFMT TDIKRVNHIIRLAKNYLNSALFPDRDEDEIRQKDFGLLKP >gi|289656366|gb|ADEA01000001.1| GENE 119 128032 - 128508 861 158 aa, chain + ## HITS:1 COG:NMA1643 KEGG:ns NR:ns ## COG: NMA1643 COG0782 # Protein_GI_number: 15794537 # Func_class: K Transcription # Function: Transcription elongation factor # Organism: Neisseria meningitidis Z2491 # 1 158 1 158 158 236 91.0 1e-62 MQKIPLTVRGAELLKQELQHLKSVARPEIIEAIAEARSHGDLSENAEYEAAKEKQGFIEG RISELEYKLSVAHIINPAEIHAEGKIVFGSTVTLEDMETEEQVTYQIVGEDEADIKEHKI YVGSPIARALIGKEEGDVAEVQAPGGVREYDIISVEYI >gi|289656366|gb|ADEA01000001.1| GENE 120 128770 - 129054 239 94 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|56478165|ref|YP_159754.1| RNA-binding protein [Aromatoleum aromaticum EbN1] # 13 93 11 91 156 96 55 6e-19 MANEKLSTKEILELKARAHHLNPVVMVGQQGLTEAVIKETDAALTAHELIKIRIFGDDRA ERIAICDALCEAVDAQPVQHIGKLLVLWRKNPEA >gi|289656366|gb|ADEA01000001.1| GENE 121 129195 - 129815 532 206 aa, chain + ## HITS:1 COG:NMA1008 KEGG:ns NR:ns ## COG: NMA1008 COG0293 # Protein_GI_number: 15793964 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 23S rRNA methylase # Organism: Neisseria meningitidis Z2491 # 1 206 1 206 206 372 88.0 1e-103 MAVHSKSSKAWLHEHVNDHYVHMAQKDGYRARAAYKLLEINEKDKLIKRGTVLADLGSAP GSWSQVAAKLVGDSGKVFALDILPMDEIEGVSFIQGDFREDDVLARFESLLAGRPLDLVI CDMAPNMSGNAVTDQARSYYLCELALDFAANHLKTGGNFLVKVFQGAGFQEYTAAMRAVF STVQTRKPEASRNRSSEIYLLGRNKR >gi|289656366|gb|ADEA01000001.1| GENE 122 129862 - 131838 1549 658 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 [Rickettsia canadensis str. McKiel] # 6 633 1 629 636 601 51 1e-171 MEPVSVGNTIKHLLVWLALGVALMAAFNAISEKRENSQQIEYSQFIQQVNSGEVSSVNIE GSVVSGYLIKGERSDKSPFFTNAPLDDNLIKTLLDNKVRVKVTPEEKPSMLASLFYSLLP VLLLIGAWFYFMRMQSGGGGKGGAFSFGKSRARLLDKDANKVTFADVAGCDEAKEEVQEI VDYLKAPNRYQSLGGRVPRGILLAGSPGTGKTLLAKAIAGEAGVPFFSISGSDFVEMFVG VGASRVRDMFEQAKKNAPCIIFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLVEMDGFES NQTVIVIAATNRPDVLDPALQRPGRFDRQVVVPLPDIRGREQILKVHSKKVPLDASVDLV SLARGTPGFSGADLANLVNEAALFAGRRNKIKVDQSDFEDAKDKIYMGPERRSMVMHEDE KRATAYHEAGHAIVAESLPFTDPVHKVTIMPRGRALGLTWQLPERDRISMYKDQMLSQLS ILFGGRIAEDIFVGRISTGASNDFERATQMAREMVTRYGMSDKMGVMVYAENEGEVFLGR SVTRSQHISEKTQQEIDAEVRRILDEQYAVAYKILDENRDKMEIMCKALMEWETIDRDQV LEIMAGKQPSPPKDYSHNLRQDEEGEASEVQATDTIQPAETEPEPMPIEAQENSQDKA >gi|289656366|gb|ADEA01000001.1| GENE 123 131993 - 132475 582 160 aa, chain - ## HITS:1 COG:NMB1018 KEGG:ns NR:ns ## COG: NMB1018 COG0454 # Protein_GI_number: 15676906 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Neisseria meningitidis MC58 # 1 160 1 160 160 223 66.0 1e-58 MSLLTVLRPANRQDCRFIHNAHRHAVQYTCIRSYDERVLQAWEELLGMESYIEAMEDKKK ALWVVEYKGVVQGFFQVDFKEAQLDALYVHPFVHNQGLGTALLSRAEELAARAGLSFMKL YASLNSVPFYRLNGYESLGAAVLPLNETVRVKCELMRKYL >gi|289656366|gb|ADEA01000001.1| GENE 124 132639 - 133775 1364 378 aa, chain - ## HITS:1 COG:NMB1019 KEGG:ns NR:ns ## COG: NMB1019 COG0026 # Protein_GI_number: 15676907 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) # Organism: Neisseria meningitidis MC58 # 1 378 1 378 378 665 91.0 0 MNTSPILPPAMLGILGGGQLGRMFTVAAKTMGYKVTVLDPDPDAPAAEFADRHLCAPFDD QAALDELAKCAAVTTEFENVNADAMRFLAKHTNVSPSGDCVAIAQNRIQEKAWIRKAGLQ TAPYQAVCRSDDISEASAQFLPGILKTATLGYDGKGQIRVKTVDELKAAFAEHGGVDCVL EKMVDLRGEISVIVCRLNDENVQTFDPAENIHENGILAYSIVPARLSADVQQQARQMAQR LADELDYVGVLAVEMFVVGDTHELVVNEIAPRPHNSGHHTLDACAADQFQQQVRIMCNLP PADTKLLSSCCMANILGDVWQEDGGEPNWLPLQSHSNVHLHLYGKKAARKGRKMGHFTVL SADADAALQQSQKLRSLL >gi|289656366|gb|ADEA01000001.1| GENE 125 134070 - 134270 148 66 aa, chain - ## HITS:1 COG:NMB0047 KEGG:ns NR:ns ## COG: NMB0047 COG2827 # Protein_GI_number: 15675987 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease containing a URI domain # Organism: Neisseria meningitidis MC58 # 1 64 1 64 94 103 81.0 6e-23 MQPAVYILASQRNGTLYIGVTSNLIQRVYQHREHLAQGFTNQHHVTMLVWYELHSTMEHA ITRKSN >gi|289656366|gb|ADEA01000001.1| GENE 126 134410 - 134673 257 87 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298368452|ref|ZP_06979770.1| ## NR: gi|298368452|ref|ZP_06979770.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 87 1 87 87 112 100.0 9e-24 MQIIQLKFITNVQNAKKSITLTKEVKQALNIVDNTDEYTLIIEVSSSNGSKTVVTNTTSG GETKVSDFNDHIDNGELVTVTVSKLLI >gi|289656366|gb|ADEA01000001.1| GENE 127 134728 - 136203 2299 491 aa, chain - ## HITS:1 COG:NMA1247 KEGG:ns NR:ns ## COG: NMA1247 COG0147 # Protein_GI_number: 15794182 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component I # Organism: Neisseria meningitidis Z2491 # 1 491 1 491 491 991 97.0 0 MISKQEYQAQAAQGYNRIPLVQELLADLDTPLSLYLKLANRPYTYLLESVVGGERFGRYS FIGLPCGHYLKVCGKHVDVYQNGEIVEQHDGNPLPFIETFHNRFKTPEIPSLPRFTGGLV GYFGYETIYNFEHFAHRLKNTAKADPLGTPDILLMLSQELAVIDNLSGKIHLIVYADPSQ PDGYECARERLEDIRTQLRQSCAIPLSLGSKHTEAVSEFGQEPFKACVDKIKDYIFAGDC MQVVPSQRMSMEFTDSPLALYRALRTLNPSPYLFYYDFGDFHIVGSSPEILVRRERDDVI VRPIAGTRLRGKTPAEDLANEQDLLSDAKEIAEHVMLIDLGRNDVGRISKTGEVKVTDKM VIEKYSHVMHIVSNVEGRLKEGVTNMDILAATFPAGTLSGAPKVRAMEIIEEVEPSKRGI YGGAVGVWGFNNDMDLAIAIRTAVVKNNTLYVQSGAGIVADSDPTSEWQETQNKARAVVR AAQMVQEGLDK >gi|289656366|gb|ADEA01000001.1| GENE 128 136432 - 136842 544 136 aa, chain - ## HITS:1 COG:no KEGG:NMC1014 NR:ns ## KEGG: NMC1014 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 134 1 121 121 125 60.0 5e-28 MFKRPEELIMLVLAVLWVILTYFLCGYFGAPAQTSLLIAALTLIWAAASFSLWQRNYSRL IWPVLLGLLVACWWPFLDWYAVKNIVVPGMESQAIIVNKPWYAGWTFKFILALIPICAGY FFKWKNSRKSKTSPAL >gi|289656366|gb|ADEA01000001.1| GENE 129 136984 - 137763 669 259 aa, chain + ## HITS:1 COG:BS_yueD KEGG:ns NR:ns ## COG: BS_yueD COG1028 # Protein_GI_number: 16080235 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Bacillus subtilis # 6 223 5 227 243 100 32.0 3e-21 MAAKIIISGHSSGLGKALAELYLEQGCPVLGIARRMLPPREGLQQCTLDLSDSGTLARWL ESGAPEAFINGADELVLINNAGTVAPSAVCGRQRPSEIAAAVALNVAAPLMLTNHVLAVR PESLPVKIVHISSGAGRKAYPGWSVYGATKAALDHHARCVAAEDRRNVAIASIAPGVVDT AMQAEIRGLPQDEFPVLPRFVQLRRENGLASPESAAALIAAMIADEDFGGEVIEDVRRRQ ELKETFQTASALRERPSET >gi|289656366|gb|ADEA01000001.1| GENE 130 137780 - 138394 776 204 aa, chain + ## HITS:1 COG:NMA1237 KEGG:ns NR:ns ## COG: NMA1237 COG2840 # Protein_GI_number: 15794177 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 203 1 200 201 272 70.0 3e-73 MSTDFQSTLKALGKQAKKEAEARAEEAAAARRRDEDNIDFAKAVGGVTPLKDSRRYEAPR DCSPIKPRPKEAGALAEEDYFYVGSGGCDEPPASFSKNGQGKNDIQRLRNGHYPVVADVD LHGYTQEEAQQVLNEFIEFTKKRGVCGEIIHGSGLGSAGYKPVLKNMTRRWLMQHPDVLA YVEPRAGNDGAVRILLKRSRREEG >gi|289656366|gb|ADEA01000001.1| GENE 131 138933 - 141596 3980 887 aa, chain + ## HITS:1 COG:NMB1341 KEGG:ns NR:ns ## COG: NMB1341 COG2609 # Protein_GI_number: 15677207 # Func_class: C Energy production and conversion # Function: Pyruvate dehydrogenase complex, dehydrogenase (E1) component # Organism: Neisseria meningitidis MC58 # 1 887 1 887 887 1709 91.0 0 MSTQLHDVDPIETREWLDALSSVLEYEGSERAQYLLENLVKYGRRNGVRMPHGTTTPYVN TIAKSDEKPIPGDQAIEHRIRAFVRWNAAAIVLRAGKKDLELGGHIASFQSSATMYEVGF NHFWKAKGEGEEGDLVFFQGHSAPGMYARAFVEGRLTEEQLNNFRQETQGNGLPSYPHPH LLPDFWQFPTVSMGLGPLMAIYQARFLKYLESRGLAKTKGRKVWVFCGDGEMDEPESQGA IALAAREGLDNLIFVINCNLQRLDGPVRGNGKIIQELEGNFTGAGWNVVKVIWGSRWDKL LERDTDGILRKRMEECLDGDYQTYKSKDGAYVREHFFNTPELKALVADMTDDEIWALNRG GHDPQKVYNAYDRAVNHAEGRPTLILAKTIKGYGMGAAGEGQNVAHQAKKMDKASLKQFR DRFDIPVTDEQIESGDLPYLAFAPDSEEYKYLHARREALGGYLPQRHPTQEVLEVPELSA FDAQLKSSGDREFSTTMAFVRILSTLLKDKKIGKRIVPIVPDESRTFGMEGMFRQYGIWN PKGQQYTPQDKDQLMFYKESVDGQILQEGINEPGAMADWIAAATSYANSDFAMIPFYIYY SMFGFQRIGDLAWAAGDMHARGFLLGGTAGRTTLNGEGLQHEDGHSHVQADLIPNCVTYD PTFQYEVAVIVHDGLRRMYANNEDVFFYMTLMNENYTHPDMPEGVEEQILKGMYLLKSGG KGDKKVQLMGSGTILQEVIAGAELLKADFGVEADIWSCPSFNQLHRDAIEVERYNRLHPL ETAKVPFVTSQLKGHEGPVVVATDYIRSYADRIRAYVPNDYHVLGTDGFGRSDSRANLRS FFEVDRYSVAVTALSALAEQGKVSKETVQQAIEKYGIDVSASPSWKR >gi|289656366|gb|ADEA01000001.1| GENE 132 141727 - 143328 2044 533 aa, chain + ## HITS:1 COG:NMA1555 KEGG:ns NR:ns ## COG: NMA1555 COG0508 # Protein_GI_number: 15794448 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes # Organism: Neisseria meningitidis Z2491 # 1 533 1 535 535 810 91.0 0 MSIVEIKVPDIGGHENVDIIAVEVKAGDTIAVDDTLITLETDKATMDVPADAAGVVKEVK VKVGDKISEGGVILTVETGAAAAEAAPAPVAEAPPAPAAAPAAAPAGGATVQVAVPDIGG HTDVDVIAVEVKVGDTVAEDDTLITLETDKATMDVPCTAAGVVKAVFLKVGDKVSEGTAI IEVETAGSAAAPAPAQAAVPAAAPAPAAVPAPVAAPVPAAAKIDEAAFAKAHAGPSARKL ARELGVDLGQVKGTGLKGRIMGDDIKAFVKSVMQGGAAKPAAAGASLGGGLDLLPWPKVD FSKFGNVEVKELSRIKKISGQNLSRNWVVIPHVTVHEEADMTELEEFRKQLNKEWEREGV KLSPLAFIIKASVSALKAFPEFNASLDGDNLVLKNYFNIGFAADTPNGLVVPVIKDVDQK GLKEISQELTELSKKAREGKLKPQEMQGACFTISSLGGIGGTGFTPIVNAPEVAILGVCK SQIKPVWNGKEFAPRLMCPLSLSFDHRVIDGAAGMRFTVFLANLLKDFRRITL >gi|289656366|gb|ADEA01000001.1| GENE 133 143416 - 145203 678 595 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 117 582 2 451 458 265 34 7e-70 MSLVELKVPDIGGHENVDIIAVEVNVGDTIAVDDTLITLETDKATMDVPAEVAGVVKEVK VKVGDKISEGGLIVVVEAEGAAAAPKAEAPAAAPAQEAPKAAAPAPQAAQFGGSADAEYD VVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRH LAANGIKYPEPELDIDMLRGYKEGVVSRLTTGLAGMAKGRKVDVIQGDGQFLDPHHLEVS LTTGDVYEQATPTGEKKIVAFKNCIIAAGSRVTKLPFIPEDPRIIDSSGALALKEVPGKL LIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQGADRDLVKVWQKQNEYRFDNIMINTK TVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNGKLISAEKAGVAVTDRGFIEV DKQMRTNVPHIYAIGDIVGQPMLAHKAVHEGHVAAENCAGHKAYFDARVIPGVAYTAPEV AWVGETELSAKASGRKITKANFPWAASGRAIANGCDTGFTKLIFDAETGRIIGGGIVGPN GGDMIGEICLAIEMGCDAEDIGKTIHPHPTLGESIGMAAEVALGTCTDLPAQKKK >gi|289656366|gb|ADEA01000001.1| GENE 134 145309 - 146229 1153 306 aa, chain - ## HITS:1 COG:NMA1085 KEGG:ns NR:ns ## COG: NMA1085 COG0564 # Protein_GI_number: 15794033 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthases, 23S RNA-specific # Organism: Neisseria meningitidis Z2491 # 1 302 1 303 307 456 76.0 1e-128 MKKRINPLPLRDGIKPSYLVLPHEKRFYGLPLLHFLCTHFPFVGEDNWRRRLNSGSVVGA DGVPLNENTPFKAGEVMYYYRETSRDSEPRIPFDEKILHVDEHLIVVDKPHFLPVTPSGR FLHETLLTRLRLRPELQHLNVGDITPVHRLDKDTAGVMLLSHNPAVRRHYQAMFQDKAVR KTYEALAPTRTDLRYPHRISSRLVRSERFFLTQETDGEPNAHTVIELFENRGDTSLYRLY PQTGKKHQLRVHMTSLGIPILNDMYYPVPSDAEEDYGKPLKLLAKSIEFQDPVSGMTRRF ESMQTL >gi|289656366|gb|ADEA01000001.1| GENE 135 146375 - 147670 1525 431 aa, chain + ## HITS:1 COG:NMA1065 KEGG:ns NR:ns ## COG: NMA1065 COG0124 # Protein_GI_number: 15794014 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Histidyl-tRNA synthetase # Organism: Neisseria meningitidis Z2491 # 1 431 1 431 431 773 89.0 0 MAQKIQSVKGMNDLLPVEQKDFKLTAAFWQAFEDTVGRWTRAYGYQQIRTPILEQTGLFV RSIGEETDVVGKEMYTFSDSNESLSLSLRPEGTASCLRAVVEHNLLYNGPQKLWYMGPMF RRERPQKGRYRQFHQVGIEALGFEGPDVDAEIIAMSADLWDKLGIRDYLTLEINSLGNRE ERAAHRHALVDYLGRHQDKMDEDDKRRLKTNPLRVLDTKNPALQEVCNSAPRLIDYLGDA SQAHYARLKAMLDGLGIRYIENPRLVRGLDYYNQTVFEWTTDKLGAQATVCGGGRYDGLI EELGGKPAPSIGFAMGIERLLLLVHEYGSLRADAAPDVYTVHQGEGADLQVMKYARLLRD AGFNVLQHSGSQSLKAQMKKADGSGARFTLIVAQDELSSGSATLKDMQGRHSQQTVAAAD LINTLQQWKNA >gi|289656366|gb|ADEA01000001.1| GENE 136 147671 - 148300 989 209 aa, chain + ## HITS:1 COG:NMA1064 KEGG:ns NR:ns ## COG: NMA1064 COG2976 # Protein_GI_number: 15794013 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 209 1 209 209 237 70.0 1e-62 MAAHLEEQQELDDFKYFWKNWGRWLFALLIAAALGYLGYIIYKDHKISQNREAAEVLAQM VDKAQSKADSKQINADLLKLQQDYSNTVPAAQATMMVAATEFDAGRYDTAAGHLNWVLSN QKAPLIQALAAQRLAVVLLQQKKYDAAITVLNTKVEADFEPLLLEAKGDVYAAQNKTKEA TQSYQQALEKLPKDAIERELLQMKLDSQK >gi|289656366|gb|ADEA01000001.1| GENE 137 148987 - 150444 2059 485 aa, chain + ## HITS:1 COG:NMB0852 KEGG:ns NR:ns ## COG: NMB0852 COG1160 # Protein_GI_number: 15676748 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Neisseria meningitidis MC58 # 1 485 1 485 485 909 97.0 0 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKIGSKPYLVIDTGGF EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSQRPVYLAVNK GEGGNRAVLAAEFYELALGEPHVISGAHGDGVYYLIEEILEKFPEPEAEEADVKHPVFAV IGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAGVRRRGKVD EAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVAVNKWDGIS EERREQIKRDISRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIKMPTPKITRV LQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLTQTFRKAFN LQGTPLRIQYNVSENPYENAEDKPKKKPLRRVSLSNRIEKREGRKEEKNRFKKKTKVSVK KQYSK >gi|289656366|gb|ADEA01000001.1| GENE 138 150687 - 150977 376 96 aa, chain + ## HITS:1 COG:NMA0961 KEGG:ns NR:ns ## COG: NMA0961 COG1923 # Protein_GI_number: 15793918 # Func_class: R General function prediction only # Function: Uncharacterized host factor I protein # Organism: Neisseria meningitidis Z2491 # 1 96 1 97 97 139 88.0 1e-33 MTAKGQLLQDPFLNALRKEHVPVSIYLVNGIKLQGQVESFDQYVVLLRNTSVTQMVYKHA ISTIVPARAVSLQHENKPQQPANAPVQVETVQQSAE >gi|289656366|gb|ADEA01000001.1| GENE 139 151088 - 151648 577 186 aa, chain + ## HITS:1 COG:NMB0747 KEGG:ns NR:ns ## COG: NMB0747 COG0500 # Protein_GI_number: 15676645 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Neisseria meningitidis MC58 # 1 186 1 188 188 257 68.0 7e-69 MYLENILPFAHHLLRGRLKNGDAALDGTAGNGHDTLLLAQCVGGGKVWAFDVQPQALQQT RRRLEEAGVSAELICDGHEKLADYVDRPLTAAVFNFGWLPGGDKTCTTQAATSVAALSAA VSLLEESGLLVAVLYPGHEAGFAEAQSVEEWAAALPQQQFAVLKYVFTNRQNRPPYLLAI EKLRQK >gi|289656366|gb|ADEA01000001.1| GENE 140 151699 - 152070 428 123 aa, chain + ## HITS:1 COG:NMB0746 KEGG:ns NR:ns ## COG: NMB0746 COG3094 # Protein_GI_number: 15676644 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 1 121 1 120 124 137 73.0 6e-33 MQYLFVKNMHMTFAVVTILLFNIRFFLLLSKPEKPLAGIWKVLPHLNDTMLLFAGLWLMK ITHFTPFGNANWLGVKILLLLVYIGLGVVMMRARPRSPKFFITYLLAMACVGSIVYLAMY KPF >gi|289656366|gb|ADEA01000001.1| GENE 141 152093 - 152593 524 166 aa, chain + ## HITS:1 COG:NMA0958 KEGG:ns NR:ns ## COG: NMA0958 COG0801 # Protein_GI_number: 15793915 # Func_class: H Coenzyme transport and metabolism # Function: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase # Organism: Neisseria meningitidis Z2491 # 5 161 7 163 164 223 72.0 1e-58 MLKTAVIALGSNLQNPASQVRAALQAVGGHPAIRINKISSLYVTAPVGYDDQPDFINAVC AVETSLSAEELLAELNRIEAAFGRERSFRNAPRTLDLDIIDFDGRSSNDPHLTLPHPRAH ERGFVMLPLAEILPAFRLGDKGTAAELAAELGGSGVRLLDEGAGQD >gi|289656366|gb|ADEA01000001.1| GENE 142 152684 - 153322 984 212 aa, chain + ## HITS:1 COG:RSc2629 KEGG:ns NR:ns ## COG: RSc2629 COG1428 # Protein_GI_number: 17547348 # Func_class: F Nucleotide transport and metabolism # Function: Deoxynucleoside kinases # Organism: Ralstonia solanacearum # 4 208 7 211 214 124 36.0 1e-28 MNYRYIVVEGSIGSGKSELSRRLAKHFEALHLTESPERNPFLEQFYLNASNHGLATELFF LMRRAENVDIINAEEDKGGRIIADFLLEKDQIFVPVVLKDPEQTLFWELRRKIMPQYPVP DLVVYLQTSGEADTKRLQRRGDGILSMFPSGYLGKIQQEYSRFFHLYQNAPLLIVNADEL DFAGNDEHFDMLLQAMGGMQGSRRYLNLRETV >gi|289656366|gb|ADEA01000001.1| GENE 143 153336 - 153773 691 145 aa, chain + ## HITS:1 COG:NMA0963 KEGG:ns NR:ns ## COG: NMA0963 COG1225 # Protein_GI_number: 15793920 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Neisseria meningitidis Z2491 # 3 143 25 165 167 273 90.0 1e-73 MPKYEFTLPSSSGAEFNSAEHLPLVVYFYPKDNTPGCTTEGLDFNARLEQFEKLGYTVVG ISRDGVKSHQNFCTKQGFRFELLSDKDETVCKLFDVIKLKKLYGKESFGVERSTFVLNAE GEIMHEWRKVKVGGHAQEVLETLGG >gi|289656366|gb|ADEA01000001.1| GENE 144 153849 - 154721 919 290 aa, chain + ## HITS:1 COG:NMB0751 KEGG:ns NR:ns ## COG: NMB0751 COG4974 # Protein_GI_number: 15676649 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinase XerD # Organism: Neisseria meningitidis MC58 # 1 290 1 291 291 374 67.0 1e-103 MDELIDKLLEHLWLNHRLSQNTLQSYRRDLEKVAARLRQGGKDWFGAAAEDLAAAIYVPE EKASSQARALSACKRLYAWLEETEKRADNPTRFLTSPHKEQPLPGLITEAQIEKLLAAPD VDTPHGLRDKTLLEVMYATGLRVTEAVKLKMSDLDLNKGWINTIGKGDKQRYVPLGEEAV YWIERYCAESRPLLLKNKICDELFVSQKKSGISRQLAWMIVKEYADAAGIRSLSPHGLRH AFATHLVNHGADLRVVQMLLGHADISTTQIYTHVANQRLKELVGKHHPRS >gi|289656366|gb|ADEA01000001.1| GENE 145 154871 - 155299 542 142 aa, chain + ## HITS:1 COG:RSp1153 KEGG:ns NR:ns ## COG: RSp1153 COG2005 # Protein_GI_number: 17549374 # Func_class: R General function prediction only # Function: N-terminal domain of molybdenum-binding protein # Organism: Ralstonia solanacearum # 1 140 123 268 269 77 35.0 8e-15 MKTSARNQFTGIVKRIKNGDVGSEVTITLPGGHELVAMITRESCNDLGLNVGSAVIALIK STAIIIATDLEHIKLSARNRLNGLICEVERGAANSVITMDLGSGLRLTAGVTLQSTEQLN LHPGQRATAIFKAGSVVLGVLA >gi|289656366|gb|ADEA01000001.1| GENE 146 155562 - 155768 331 68 aa, chain + ## HITS:1 COG:NMA0965 KEGG:ns NR:ns ## COG: NMA0965 COG2906 # Protein_GI_number: 15793922 # Func_class: P Inorganic ion transport and metabolism # Function: Bacterioferritin-associated ferredoxin # Organism: Neisseria meningitidis Z2491 # 1 67 1 65 66 69 73.0 1e-12 MFVCICNAITDREIKETVAAGAVTMNDLQAQLGVATCCGCCSELAASFLNGAGTQVQGSV TAGINVQC >gi|289656366|gb|ADEA01000001.1| GENE 147 156035 - 157363 1683 442 aa, chain + ## HITS:1 COG:BS_brnQ KEGG:ns NR:ns ## COG: BS_brnQ COG1114 # Protein_GI_number: 16079722 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid permeases # Organism: Bacillus subtilis # 15 435 13 433 440 329 46.0 6e-90 MSSSSGNQKASLWAVGLMLFALFFGAGNLIFPAYLGQQAGENWLSAMFGFLLTGAGLPLL GVIAIGYSGSRDVQALASRVSPWYGVAFAAALYLAIGPLFATPRTATVSFEVGVVPFIGE ANKSVGLAVFSVVFFGVAYWLSMSPGKLVDRIGKILTPALLLTIAALVGYAALNPMGALT EAQGDFVTQPLAKGILEGYGTMDALASLVFAIIVIDAVRAMGVDNRAELLRTTTVSGVIA ASCLAAVYLFIGYMGATSVAGLGVQENGALVLSKTAQYYFGMGGNVLLGVIVLLACLSTA VGLITSCAEYFNRLCPGISYKMFVIINTLVSMGLANKGLADIISFSVPVLMLLYPLTVVI ILLAFLHNFFGGSRIVYFCTIMATLVVGLLDAYKAAFGFSEEAASAINNVLPLYHIGLGW LLPATAGFVLGCILNAALKKKA >gi|289656366|gb|ADEA01000001.1| GENE 148 157438 - 157680 286 80 aa, chain + ## HITS:1 COG:NMB0753 KEGG:ns NR:ns ## COG: NMB0753 COG0526 # Protein_GI_number: 15676651 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Neisseria meningitidis MC58 # 1 76 1 76 77 108 73.0 3e-24 MKLTLMFREYCSLCHKMKAELLPYKEAFGFELEVLDVDDHPDLEEKYNELVPVLLDGDEE ICHWFLDADKLRAHLQNRMG >gi|289656366|gb|ADEA01000001.1| GENE 149 157792 - 157890 162 32 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQHRRRQAIFQAAKRAFKGSKASSPVEPRSAR >gi|289656366|gb|ADEA01000001.1| GENE 150 158289 - 159152 752 287 aa, chain - ## HITS:1 COG:NMA0967 KEGG:ns NR:ns ## COG: NMA0967 COG1091 # Protein_GI_number: 15793924 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-4-dehydrorhamnose reductase # Organism: Neisseria meningitidis Z2491 # 1 286 1 286 287 368 65.0 1e-102 MRILLTGSKGQLAQCFRDRLPDKWEVISTDSASLDITDATAVFNMVQNFQPDAIVNAAAY TAVDKAEREYRKAFAVNASAVHNLAAAAYEAKVRFIHISTDYVFEGDGKNPYSEHDVPNP QSIYGKSKLSGEFLALAANPESIVVRTAWLFSEYGENFVKTMLRLAKERDTLSVVNDQIG NPTYAGDLAQALIDILKSAGPARGVYHFCGDKSVSWYEFAQAIFQTASENIKGFKVPELK PIPSEQYPTPAPRPAYSVLDCGKINRDFGVKTSDWQKALGSIIGRFD >gi|289656366|gb|ADEA01000001.1| GENE 151 159879 - 160184 255 102 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167042352|gb|ABZ07080.1| putative ribosomal protein L31e [uncultured marine crenarchaeote HF4000_ANIW97M7] # 13 101 114 208 236 102 53 8e-21 MWTPQIQPHHKGPSYCPPHHSYPPIKPAPWCPPKPCPEPKPEPKPEPKPEPKPEPKPEPK PEPKPEPKPEPKPEPKPEPKPEPKPEPKPEPKPEPKPEPKPE >gi|289656366|gb|ADEA01000001.1| GENE 152 159941 - 160186 214 81 aa, chain - ## HITS:0 COG:no KEGG:no NR:no GSGFGSGLGSGFGSGLGSGFGSGLGSGFGSGLGSGFGSGLGSGFGSGLGSGFGSGLGSGF GSGLGSGHGFGGHHGAGLIGG Prediction of potential genes in microbial genomes Time: Thu May 26 13:00:09 2011 Seq name: gi|289656365|gb|ADEA01000002.1| Neisseria sp. oral taxon 014 str. F0314 cont1.2, whole genome shotgun sequence Length of sequence - 103045 bp Number of predicted genes - 118, with homology - 115 Number of transcription units - 51, operones - 24 average op.length - 3.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 1205 292 ## PROTEIN SUPPORTED gi|89068227|ref|ZP_01155637.1| 30S ribosomal protein S2 + Term 1232 - 1281 16.1 + Prom 1263 - 1322 5.1 2 2 Tu 1 . + CDS 1351 - 2214 1055 ## COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase + Term 2407 - 2457 3.7 + Prom 2272 - 2331 3.3 3 3 Tu 1 . + CDS 2543 - 4660 1975 ## PROTEIN SUPPORTED gi|62291006|ref|YP_222799.1| polynucleotide phosphorylase/polyadenylase + Term 4693 - 4744 11.7 - Term 4880 - 4916 3.8 4 4 Tu 1 . - CDS 5032 - 5736 779 ## COG2932 Predicted transcriptional regulator - Prom 5943 - 6002 4.0 + Prom 5843 - 5902 6.1 5 5 Op 1 3/0.167 + CDS 5953 - 6216 106 ## COG3423 Predicted transcriptional regulator 6 5 Op 2 6/0.083 + CDS 6294 - 8339 1551 ## COG2801 Transposase and inactivated derivatives 7 5 Op 3 . + CDS 8381 - 9295 946 ## COG2842 Uncharacterized ATPase, putative transposase 8 5 Op 4 . + CDS 9371 - 9613 344 ## NMA1880 hypothetical protein 9 5 Op 5 . + CDS 9603 - 9902 217 ## NMA1879 hypothetical protein 10 5 Op 6 . + CDS 9905 - 10057 109 ## 11 5 Op 7 . + CDS 10076 - 10225 151 ## 12 5 Op 8 . + CDS 10296 - 10463 217 ## NMCC_1003 hypothetical protein 13 5 Op 9 . + CDS 10463 - 10675 291 ## gi|298368491|ref|ZP_06979809.1| hypothetical protein HMPREF9016_00156 14 5 Op 10 . + CDS 10593 - 11696 699 ## HD0107 hypothetical protein 15 5 Op 11 . + CDS 11693 - 11833 151 ## 16 5 Op 12 . + CDS 11870 - 12058 152 ## gi|298368494|ref|ZP_06979812.1| hypothetical protein HMPREF9016_00159 17 5 Op 13 . + CDS 12071 - 12679 920 ## NMA1871 hypothetical protein + Prom 12690 - 12749 1.8 18 6 Op 1 . + CDS 12955 - 13335 298 ## NMA1870 hypothetical protein 19 6 Op 2 . + CDS 13336 - 13512 215 ## NMA1869 hypothetical protein + Term 13543 - 13571 0.6 20 6 Op 3 1/0.167 + CDS 13585 - 13860 171 ## PROTEIN SUPPORTED gi|148826039|ref|YP_001290792.1| 50S ribosomal protein L35 + Term 13874 - 13925 2.2 21 7 Op 1 . + CDS 13939 - 14370 569 ## COG4382 Mu-like prophage protein gp16 22 7 Op 2 . + CDS 14367 - 14813 649 ## NMA1866 putative integral membrane protein + Term 14821 - 14853 1.5 23 7 Op 3 . + CDS 14861 - 15502 487 ## NMA1865 hypothetical protein + Term 15518 - 15553 3.4 + Prom 15531 - 15590 2.1 24 8 Op 1 . + CDS 15634 - 16179 825 ## COG0860 N-acetylmuramoyl-L-alanine amidase 25 8 Op 2 . + CDS 16116 - 16364 101 ## gi|298368503|ref|ZP_06979821.1| conserved hypothetical protein 26 8 Op 3 . + CDS 16382 - 16639 214 ## NMCC_0932 hypothetical protein 27 8 Op 4 . + CDS 16620 - 17036 379 ## NMO_0891 putative phage associated membrane protein 28 8 Op 5 . + CDS 16930 - 17235 129 ## NMB1087 hypothetical protein + Term 17263 - 17300 -0.2 - Term 17231 - 17261 3.3 29 9 Tu 1 . - CDS 17280 - 17450 335 ## COG3422 Uncharacterized conserved protein - Prom 17632 - 17691 5.6 + Prom 17366 - 17425 2.4 30 10 Op 1 . + CDS 17463 - 17681 166 ## NMC0974 putative phage related protein 31 10 Op 2 . + CDS 17678 - 18022 453 ## NMA1857 hypothetical protein 32 10 Op 3 . + CDS 18019 - 18300 260 ## NMA1856 hypothetical protein 33 10 Op 4 . + CDS 18300 - 18515 306 ## NMA1855 hypothetical protein 34 10 Op 5 . + CDS 18518 - 19021 472 ## NMA1854 hypothetical DNA-binding protein 35 10 Op 6 . + CDS 19024 - 20676 1499 ## NMA1852 hypothetical protein + Term 20726 - 20754 1.6 36 11 Op 1 4/0.083 + CDS 20755 - 22314 1561 ## COG4383 Mu-like prophage protein gp29 37 11 Op 2 3/0.167 + CDS 22307 - 23653 1163 ## COG2369 Uncharacterized protein, homolog of phage Mu protein gp30 38 12 Tu 1 3/0.167 + CDS 23757 - 24254 390 ## COG5005 Mu-like prophage protein gpG 39 13 Op 1 3/0.167 + CDS 24463 - 25527 1424 ## COG4388 Mu-like prophage I protein 40 13 Op 2 . + CDS 25549 - 26451 1347 ## COG4397 Mu-like prophage major head subunit gpT 41 13 Op 3 . + CDS 26489 - 26962 628 ## NMA1845 hypothetical protein 42 13 Op 4 3/0.167 + CDS 26959 - 27384 714 ## COG4387 Mu-like prophage protein gp36 43 13 Op 5 . + CDS 27425 - 28036 672 ## COG5003 Mu-like prophage protein gp37 44 13 Op 6 . + CDS 28033 - 28221 274 ## NMA1842 hypothetical protein 45 13 Op 7 . + CDS 28221 - 29648 2254 ## COG4386 Mu-like prophage tail sheath protein gpL 46 13 Op 8 . + CDS 29662 - 30036 622 ## NMA1840 hypothetical protein + Term 30046 - 30074 1.0 - Term 30027 - 30068 5.2 47 14 Tu 1 . - CDS 30077 - 30256 187 ## Ent638_2907 hypothetical protein - Prom 30381 - 30440 4.2 + Prom 30311 - 30370 4.8 48 15 Op 1 . + CDS 30425 - 30814 446 ## NMA1835 hypothetical protein 49 15 Op 2 . + CDS 30856 - 31020 191 ## NMA1834 hypothetical protein 50 15 Op 3 . + CDS 31017 - 33161 2605 ## NMA1833 hypothetical DNA-binding protein 51 15 Op 4 4/0.083 + CDS 33161 - 34528 1614 ## COG4228 Mu-like prophage DNA circulation protein 52 16 Op 1 4/0.083 + CDS 34662 - 35651 1219 ## COG4379 Mu-like prophage tail protein gpP 53 16 Op 2 5/0.083 + CDS 35652 - 36281 875 ## COG4384 Mu-like prophage protein gp45 54 16 Op 3 4/0.083 + CDS 36342 - 36695 443 ## COG4381 Mu-like prophage protein gp46 55 16 Op 4 2/0.167 + CDS 36692 - 37759 1000 ## COG3299 Uncharacterized homolog of phage Mu protein gp47 56 16 Op 5 . + CDS 37756 - 38322 756 ## COG3778 Uncharacterized protein conserved in bacteria 57 16 Op 6 . + CDS 38325 - 40607 1391 ## NMA1824 hypothetical protein 58 16 Op 7 . + CDS 40604 - 41227 428 ## NMA1823 hypothetical protein + Term 41476 - 41514 2.9 + Prom 41328 - 41387 4.0 59 17 Tu 1 . + CDS 41599 - 42435 695 ## NMA1821 hypothetical protein - Term 42424 - 42452 1.3 60 18 Tu 1 . - CDS 42487 - 42828 475 ## DNO_0103 hypothetical protein - Prom 42969 - 43028 6.9 + Prom 42928 - 42987 7.6 61 19 Op 1 . + CDS 43009 - 43767 1023 ## COG0496 Predicted acid phosphatase + Term 43775 - 43828 -0.6 + Prom 43909 - 43968 5.6 62 19 Op 2 . + CDS 44003 - 44950 739 ## COG0739 Membrane proteins related to metalloendopeptidases + Term 45015 - 45071 17.3 + Prom 45149 - 45208 5.9 63 20 Tu 1 . + CDS 45228 - 45872 599 ## gi|298368539|ref|ZP_06979857.1| hypothetical protein HMPREF9016_00205 + Prom 45922 - 45981 4.3 64 21 Op 1 . + CDS 46011 - 46664 376 ## Bpro_3451 TetR family transcriptional regulator 65 21 Op 2 1/0.167 + CDS 46661 - 47734 1263 ## COG0845 Membrane-fusion protein + Term 47737 - 47785 11.9 66 22 Op 1 . + CDS 47816 - 48541 819 ## COG0778 Nitroreductase 67 22 Op 2 . + CDS 48610 - 49179 770 ## COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) + Term 49225 - 49261 1.1 68 23 Op 1 . + CDS 49330 - 49596 344 ## gi|298368544|ref|ZP_06979862.1| hypothetical protein HMPREF9016_00210 69 23 Op 2 . + CDS 49657 - 49845 389 ## TDE0354 general stress protein 14 70 23 Op 3 . + CDS 49897 - 50643 1026 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) + Term 50648 - 50685 2.8 71 24 Tu 1 . + CDS 50745 - 51350 609 ## COG4832 Uncharacterized conserved protein 72 25 Op 1 . + CDS 51469 - 54291 3445 ## COG1131 ABC-type multidrug transport system, ATPase component 73 25 Op 2 . + CDS 54369 - 54719 208 ## PROTEIN SUPPORTED gi|157165407|ref|YP_001467497.1| 30S ribosomal protein S8 74 25 Op 3 . + CDS 54757 - 55449 1162 ## COG1794 Aspartate racemase + Prom 55458 - 55517 1.8 75 26 Tu 1 . + CDS 55556 - 56668 1563 ## COG0842 ABC-type multidrug transport system, permease component 76 27 Tu 1 . + CDS 57049 - 58506 1694 ## COG1538 Outer membrane protein + Term 58518 - 58567 13.6 + Prom 58848 - 58907 4.3 77 28 Tu 1 . + CDS 58959 - 61238 3244 ## COG0209 Ribonucleotide reductase, alpha subunit + Prom 61451 - 61510 2.9 78 29 Op 1 8/0.000 + CDS 61549 - 62703 1679 ## COG0208 Ribonucleotide reductase, beta subunit + Term 62743 - 62780 8.7 + Prom 62705 - 62764 1.6 79 29 Op 2 . + CDS 62790 - 63092 234 ## COG0633 Ferredoxin + Term 63121 - 63187 20.4 - Term 63107 - 63173 23.4 80 30 Tu 1 . - CDS 63299 - 64033 1180 ## COG1636 Uncharacterized protein conserved in bacteria - Prom 64102 - 64161 4.1 + Prom 64257 - 64316 4.3 81 31 Tu 1 . + CDS 64336 - 65739 2336 ## COG1027 Aspartate ammonia-lyase + Term 65755 - 65808 12.5 - Term 65744 - 65796 10.1 82 32 Op 1 . - CDS 65808 - 67022 1988 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase - Prom 67045 - 67104 4.5 83 32 Op 2 . - CDS 67167 - 70430 3451 ## COG5373 Predicted membrane protein - Prom 70565 - 70624 7.7 - Term 70566 - 70616 17.1 84 33 Tu 1 . - CDS 70646 - 72121 2303 ## COG1012 NAD-dependent aldehyde dehydrogenases + Prom 72425 - 72484 5.1 85 34 Tu 1 . + CDS 72587 - 73630 1633 ## COG1064 Zn-dependent alcohol dehydrogenases + Term 73650 - 73709 17.5 - Term 73644 - 73692 12.3 86 35 Op 1 . - CDS 73807 - 74265 408 ## COG2020 Putative protein-S-isoprenylcysteine methyltransferase 87 35 Op 2 1/0.167 - CDS 74341 - 75084 1329 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases - Prom 75107 - 75166 2.6 88 36 Tu 1 . - CDS 75189 - 76067 1226 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily + Prom 76276 - 76335 8.7 89 37 Tu 1 . + CDS 76426 - 76800 305 ## gi|298368566|ref|ZP_06979884.1| conserved hypothetical protein + Term 76808 - 76858 9.5 + Prom 76819 - 76878 2.6 90 38 Op 1 . + CDS 76915 - 77307 228 ## gi|298368567|ref|ZP_06979885.1| hemagglutinin family protein 91 38 Op 2 . + CDS 77364 - 77942 248 ## gi|298368568|ref|ZP_06979886.1| conserved hypothetical protein 92 38 Op 3 . + CDS 77957 - 78892 780 ## gi|298368569|ref|ZP_06979887.1| hypothetical protein HMPREF9016_00235 93 38 Op 4 . + CDS 78911 - 79462 495 ## gi|298368570|ref|ZP_06979888.1| hypothetical protein HMPREF9016_00236 + Term 79482 - 79527 14.6 - Term 79467 - 79518 19.2 94 39 Tu 1 . - CDS 79533 - 80876 2152 ## COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase - Prom 80913 - 80972 5.0 + Prom 80896 - 80955 5.2 95 40 Tu 1 . + CDS 81142 - 81747 712 ## Pcryo_0464 hypothetical protein + Term 81767 - 81812 13.0 96 41 Op 1 . - CDS 81815 - 82108 518 ## NT05HA_1184 hypothetical protein 97 41 Op 2 . - CDS 82120 - 83064 1656 ## COG2214 DnaJ-class molecular chaperone - Prom 83086 - 83145 5.6 - Term 83176 - 83217 9.6 98 42 Tu 1 . - CDS 83257 - 84492 787 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 - Prom 84521 - 84580 7.1 99 43 Op 1 21/0.000 + CDS 84863 - 85570 749 ## COG0283 Cytidylate kinase + Term 85602 - 85650 12.2 + Prom 85594 - 85653 2.2 100 43 Op 2 16/0.000 + CDS 85744 - 87423 2713 ## PROTEIN SUPPORTED gi|241758882|ref|ZP_04756995.1| ribosomal protein S1 101 43 Op 3 . + CDS 87434 - 87748 440 ## COG0776 Bacterial nucleoid DNA-binding protein + Term 87756 - 87798 8.1 + Prom 87793 - 87852 3.6 102 44 Tu 1 . + CDS 87961 - 89106 882 ## COG1485 Predicted ATPase + Prom 89178 - 89237 4.4 103 45 Op 1 11/0.000 + CDS 89292 - 89717 472 ## COG0105 Nucleoside diphosphate kinase + Term 89744 - 89794 2.4 + Prom 89818 - 89877 4.9 104 45 Op 2 8/0.000 + CDS 89948 - 91042 1105 ## COG0820 Predicted Fe-S-cluster redox enzyme 105 45 Op 3 6/0.083 + CDS 91046 - 91801 696 ## COG3063 Tfp pilus assembly protein PilF 106 45 Op 4 10/0.000 + CDS 91805 - 92674 516 ## COG1426 Uncharacterized protein conserved in bacteria 107 45 Op 5 . + CDS 92678 - 93943 896 ## COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis + Prom 94041 - 94100 8.9 108 46 Op 1 9/0.000 + CDS 94176 - 95162 426 ## COG0462 Phosphoribosylpyrophosphate synthetase 109 46 Op 2 . + CDS 95226 - 95798 863 ## PROTEIN SUPPORTED gi|59800883|ref|YP_207595.1| 50S ribosomal protein L25/general stress protein Ctc + Term 95824 - 95862 5.4 - Term 95812 - 95850 5.4 110 47 Tu 1 . - CDS 95970 - 98108 1143 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) - Prom 98152 - 98211 4.3 + Prom 98238 - 98297 4.9 111 48 Tu 1 . + CDS 98329 - 99027 253 ## COG0500 SAM-dependent methyltransferases + Term 99178 - 99241 -0.4 112 49 Tu 1 . - CDS 99240 - 100286 1325 ## COG1613 ABC-type sulfate transport system, periplasmic component - Prom 100313 - 100372 5.8 + Prom 100256 - 100315 5.4 113 50 Op 1 9/0.000 + CDS 100467 - 100898 534 ## COG2867 Oligoketide cyclase/lipid transport protein 114 50 Op 2 2/0.167 + CDS 100891 - 101175 445 ## COG2914 Uncharacterized protein conserved in bacteria + Term 101176 - 101215 8.0 115 51 Op 1 . + CDS 101221 - 101796 844 ## COG0193 Peptidyl-tRNA hydrolase 116 51 Op 2 . + CDS 101858 - 102388 293 ## PG1200 hypothetical protein 117 51 Op 3 . + CDS 102409 - 102615 312 ## NGK_0536 putative ring dioxygenase beta subunit 118 51 Op 4 . + CDS 102612 - 103001 425 ## NMB0794 hypothetical protein Predicted protein(s) >gi|289656365|gb|ADEA01000002.1| GENE 1 3 - 1205 292 400 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|89068227|ref|ZP_01155637.1| 30S ribosomal protein S2 [Oceanicola granulosus HTCC2516] # 102 360 359 598 620 117 34 3e-25 KPEPKPEPKPEPKPEPKPEPKPEPKPEPKPEPKPEPKPEPKPEPKPCPEPKPEPKPEPKP CPEPKPEPKPEPKPCPEPKPEPKPKPDCDDCVDDGKQNNSFGGLDKDKGNIINVVASESG PSKTIGTEQKDTIYGTSGDDIIYGQGGADVIYGGDGNDTLNGGNNGDTLYGEGGKDYLQG GSGNDYLNGGEGADIMLGGDGNDVYYVDNPGDIVKEFANVNSGIDTVRSTIDYTLPDNVE NLYLQGSGNLNGTGNALDNTINGNSGNNHLYGLAGDDCLVGKDGRDFLDGGIGNDVLIGG AGDDTYFFAKGYGHDIIQDSSGNDTLCFGQGITASDLILSKSGDDLSIKFKGSNDSVLVD DWFANDSNKVENFSFADGSSLNAANIAAQIQEQTQNAGIV >gi|289656365|gb|ADEA01000002.1| GENE 2 1351 - 2214 1055 287 aa, chain + ## HITS:1 COG:NMB0757 KEGG:ns NR:ns ## COG: NMB0757 COG0152 # Protein_GI_number: 15676655 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase # Organism: Neisseria meningitidis MC58 # 1 287 1 287 287 533 90.0 1e-151 MSAISLKKIYSGKVRDLYEIDDKRILMVASDRLSAFDVILDDPIPGKGEILTQISNFWFR KLAHIMPNHFTGDTVYDVLPESEAMALEKRAVVVKKLTPVKVEAIVRGYLAGSGWKDYRK TGAVCGIKLPEGLQESQQLPEAVFTPSTKAAVGDHDENISFEECERIIGKELAAEVRAKA IRLYTEAAEYAKSRGIIICDTKFEFGVDENGTLTLMDEVLTPDSSRFWPAGQYQVGTNPP SFDKQFVRDWLEQSGWNKQAPAPKVPADVIQKTIDKYREALHLLTQD >gi|289656365|gb|ADEA01000002.1| GENE 3 2543 - 4660 1975 705 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|62291006|ref|YP_222799.1| polynucleotide phosphorylase/polyadenylase [Brucella abortus bv. 1 str. 9-941] # 1 701 1 701 714 765 58 0.0 MFDKHVKTFQYGNHTVTLETGEIARQAAAAVKVSMGDTVVLVAVTTNKEVKEGQDFFPLT VDYLERTYAAGKIPGGFFKREGKQSEKEILTSRLIDRPIRPLFPEGFYHDIQIVAMVVSV DPEIDSDIPAMLGASAALVLSGVPFAGPIGAARVGYVNGVYVLNPTKAELAKSKLDLVVA GTSKAVLMVESEAKILPEDVMLGAVVYGHDQMQVAINAINEFADEVNPEVWDWKAPETNE ELVAKVREIAGEAIKEAFKIRQKQARSAKLDEAWNAVKDALITEETDTLAANEIKGIFKH LEADVVRTQILEGQPRIDGRDTRTVRPLNIQTGVLPRTHGSALFTRGETQALAVATLGTS RDEQIIDALSGEYTDRFMLHYNFPPYSTGEVGRVGAPKRREIGHGRLAKRALVAVLPSPE EFSYTMRVVSEITESNGSSSMASVCGGCLSLLSAGVPLKAHVAGIAMGLILDNNKFAVLT DILGDEDHLGDMDFKVAGTTEGVTALQMDIKIQGITKEIMQIALAQAKDARLHILEQMKA AVAGPQELSAHAPRLFTMKINQDKIRDVIGKGGETIRAITAETGTEINIAEDGTITIAAT TQEAGDAAKKRIEAITAEVEVGKVYEGTVVKILDNNVGAIVSVMPGKDGLVHISQIAHER VRNVSDYLQVGQVVNVKALEVDDRGRVRLSIKALLEEPMREEGEE >gi|289656365|gb|ADEA01000002.1| GENE 4 5032 - 5736 779 234 aa, chain - ## HITS:1 COG:NMA1884 KEGG:ns NR:ns ## COG: NMA1884 COG2932 # Protein_GI_number: 15794772 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Neisseria meningitidis Z2491 # 1 234 1 234 234 488 99.0 1e-138 MDFLERLKSLWPDNAKPADFYNKIDMSASGFSRVWKDGAIPTADYLIKIQEVTGCDLNWL LTGQGSPYMNKGQAVEVRTHTDGTATDTLGNPINLDEFVFIPRYDVYAAAGHGYPAEDDK PLFCMAFRRYWIENYVTRQLDKLSVIAVKGDSMEGVLNHGDNILVNHAETTPRDGLYVIR IDNQLFVKQIQKLPGKLLVKSANPVYEPFEIDLTDDNQNVAIIGRVEWYGRTVN >gi|289656365|gb|ADEA01000002.1| GENE 5 5953 - 6216 106 87 aa, chain + ## HITS:1 COG:NMA1883 KEGG:ns NR:ns ## COG: NMA1883 COG3423 # Protein_GI_number: 15794771 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Neisseria meningitidis Z2491 # 1 87 1 87 87 155 100.0 2e-38 MQKNATPKNWHRADIVAALKKKGWSLRALSIEAGLSPNTLRSALAAPYLKGERIIAAAIG VEPEEIWPERYADRNLKPVFPKRVVNG >gi|289656365|gb|ADEA01000002.1| GENE 6 6294 - 8339 1551 681 aa, chain + ## HITS:1 COG:NMA1882 KEGG:ns NR:ns ## COG: NMA1882 COG2801 # Protein_GI_number: 15794770 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Neisseria meningitidis Z2491 # 1 681 1 681 681 1305 98.0 0 MLISAVELAGLQLPKLPNSRQGIEYHAKKNNWPFEEVVGQARGGKLKKYLVSALPSEIQA AIQEKQAATLLAKVPMLPAEVKKPLRQNKKMRQLGLIPCEEGLARLDDRQTETAHARCAI VAYVLPLHELAGMPIKKAVAFVAAEATAGRLPEDVAKLIPLANARNNGERSLSEPTLYRW VRAYRAAPDSMSRLLALAPVKTREKTPLLAIDWLPYFLMFYQRPNKPTMMAAAKKLAQWY LEQGKIEQMPSYDQIQTVMKRLPEHMKERGRRTGSAYKALLPYIDRDWTALKPNDVWVGD GHSFKAKIRHPMGYLFTPEVTMIVDGCSGAVVGWSVALSETAVAVADALRHGMTHFPPPL GYYSDNGSGETGDMLDKETTGILPRIGIEHFTGIPGNPQGRGKIERLWQTITIPLAKQYA TYQGKDADAETLRRVSNALASAQKVQKKGKELSKAQEAALAAAPTWAQFMADLEEAVRRY NFEHEHRSLPKNPETGRHFTPMKYYEYRMKTDGMRVKTDVLSPLELDFMYRPEEERIPDR GAVSLHNNTYFHQGLLDYSGQKVRVAYDIHDADHVIVKDMQGKVICKAVFNGNKRAAFAE TRMEQLAERRRKGQAKRLQDKMDLIEAQRQSATPIIEQQPDFGEFLKLETESGGLVEVEN RPSESGKGKKKLRDFLWEDAG >gi|289656365|gb|ADEA01000002.1| GENE 7 8381 - 9295 946 304 aa, chain + ## HITS:1 COG:NMA1881 KEGG:ns NR:ns ## COG: NMA1881 COG2842 # Protein_GI_number: 15794769 # Func_class: R General function prediction only # Function: Uncharacterized ATPase, putative transposase # Organism: Neisseria meningitidis Z2491 # 1 304 1 304 304 572 99.0 1e-163 MIEQLRQFLETSGMSQNKVADRMGVSRSALSGYLNGKYDGDIAGMDKKAALFLEQEGDRA ELKKLDIPYVETGTAKKMKGWLGLAAWLGQLGIVYGGAGLGKTTVLKQYAATNPLALLIE PDTGYTAKVLLQEICHALDLSERGNIHELTERIINCLKRDKKSRSPRDAHRILLIDEAEQ LPTRALESLRRIHDKSGVAVALVGMPKLLLNLKGPNSEFKQLFSRVSVKMELGEMLPETD LKQIAAAVLKTNDEAVLQKVVKTAKGNARKLSKLLLIVDYLLQVNPDVDLDDDVIEHAET YLIH >gi|289656365|gb|ADEA01000002.1| GENE 8 9371 - 9613 344 80 aa, chain + ## HITS:1 COG:no KEGG:NMA1880 NR:ns ## KEGG: NMA1880 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_A # Pathway: not_defined # 1 80 1 80 80 140 98.0 1e-32 MENLKMRHLLAIPAIVIVVTACANRCTEPVPAWSLYQNETSQQRLMREKQNAADFAVLQA EKAYERMSDKERMKGVVYEN >gi|289656365|gb|ADEA01000002.1| GENE 9 9603 - 9902 217 99 aa, chain + ## HITS:1 COG:no KEGG:NMA1879 NR:ns ## KEGG: NMA1879 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_A # Pathway: not_defined # 1 99 1 99 99 184 98.0 1e-45 MKTETKICKKCGEERPLFRFKKDDAYVGGYRPVCYECLNARAKELKAVRDSMAERKIISK GISINGGKTHMEFPEEPEFMKNKYWTVTKTDYRRPLKGL >gi|289656365|gb|ADEA01000002.1| GENE 10 9905 - 10057 109 50 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSKRLARRKMPKRELKRVKAFALKQAVEKIRARWGEKAIRLASTDNKQTD >gi|289656365|gb|ADEA01000002.1| GENE 11 10076 - 10225 151 49 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNEMNVVAALLVIAILLAAVMIVLVEILVEQRVKERLEAAADRVCRGDD >gi|289656365|gb|ADEA01000002.1| GENE 12 10296 - 10463 217 55 aa, chain + ## HITS:1 COG:no KEGG:NMCC_1003 NR:ns ## KEGG: NMCC_1003 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_053442 # Pathway: not_defined # 1 55 1 55 55 66 70.0 4e-10 MNEKELVEWLEERGEMMLSKQDGKGFVIAARAADGIWKTAEAETLEHAVITWEEM >gi|289656365|gb|ADEA01000002.1| GENE 13 10463 - 10675 291 70 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298368491|ref|ZP_06979809.1| ## NR: gi|298368491|ref|ZP_06979809.1| hypothetical protein HMPREF9016_00156 [Neisseria sp. oral taxon 014 str. F0314] # 1 70 1 70 70 129 100.0 6e-29 MMNEKQNTDTERLDFLFKVETVEFSKNLDGKYCCFLYDQEVDIHGFGDSYRAALDEAMAK WEDISCLSEC >gi|289656365|gb|ADEA01000002.1| GENE 14 10593 - 11696 699 367 aa, chain + ## HITS:1 COG:no KEGG:HD0107 NR:ns ## KEGG: HD0107 # Name: not_defined # Def: hypothetical protein # Organism: H.ducreyi # Pathway: not_defined # 87 219 1 131 156 139 48.0 1e-31 MALETATVLRWMKQWQNGRIFHVCRNVDLYEFLRIVGVGNRTVRYVMYRVLGNKNADSGF VAWDFIIGYRHICDVGFGYVSVGSNVMNVKCPNCGSVNSLDALIADTGAADVMRCLLELD AEIGKAAIRYIGLFRPAKSQLSWARTAKLLNELMPSIKAESVERDGVSYPAPAAAWIHGF TETLTARDAGRLKTPLKSHGYLYEIVSKWQPSAAVAVPACPMPADAAAVNTKLRQGVHAL TQWAGEDWLKQEIAAGFALLAAQNLKGRPAAQDLPILAALWEQRLMDHAVARGEVKLIAE TDRLRIQTAFKALQDKQEWPNVIELIRALPPRLIPRAMLAKSPPDRAKGREELAKVRQTL SRKGSEK >gi|289656365|gb|ADEA01000002.1| GENE 15 11693 - 11833 151 46 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKLSEDEEAILAEFVGYYWLLFAMWCEENGHTAGDAESIRIKLESP >gi|289656365|gb|ADEA01000002.1| GENE 16 11870 - 12058 152 62 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298368494|ref|ZP_06979812.1| ## NR: gi|298368494|ref|ZP_06979812.1| hypothetical protein HMPREF9016_00159 [Neisseria sp. oral taxon 014 str. F0314] # 1 62 1 62 62 118 100.0 9e-26 MKNDWKNLNEECPCIGWICDVLLPDGTVVKNVEAVEVEDDEDFMPEVGFKKYPEATHFRK SK >gi|289656365|gb|ADEA01000002.1| GENE 17 12071 - 12679 920 202 aa, chain + ## HITS:1 COG:no KEGG:NMA1871 NR:ns ## KEGG: NMA1871 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_A # Pathway: not_defined # 2 202 3 203 203 359 96.0 4e-98 MNIDKTQYKQDAKGNLVPLANIREIDLLRDELVQEIAAKARAVQDNLIAFKREAMDDIAA FVQLSADRYDVSVGGKKGNISLHSFDGAYRVNLAMQDTLVFDEGLLAAKALIDECINEWT EGSRTELKTLINAAFQVDKEGNISTARVLGLRRLQITDEKWQRAMDALSDSLQVHISKPF VRVYQRGEDGEYQLMNLDVAKV >gi|289656365|gb|ADEA01000002.1| GENE 18 12955 - 13335 298 126 aa, chain + ## HITS:1 COG:no KEGG:NMA1870 NR:ns ## KEGG: NMA1870 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_A # Pathway: not_defined # 1 126 91 216 216 248 99.0 4e-65 MPLNKRFKRPEEYLEEVGITAPTMIFEKNSDGETWASWGIGNFFNPVKFVWAGLEEDAPK GVVTPDYAYELREGAKRIRNGCTMQPPEDFDWQNLLPGCRVIPRYEWDYLVGKWQETRND AEEQEA >gi|289656365|gb|ADEA01000002.1| GENE 19 13336 - 13512 215 58 aa, chain + ## HITS:1 COG:no KEGG:NMA1869 NR:ns ## KEGG: NMA1869 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_A # Pathway: not_defined # 1 54 1 54 66 85 100.0 4e-16 MAKIIIEIEDLPEGTDINFKGDLPAADAKDKTGAQQTAVLISKMIQAAQMMASPIRKH >gi|289656365|gb|ADEA01000002.1| GENE 20 13585 - 13860 171 91 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148826039|ref|YP_001290792.1| 50S ribosomal protein L35 [Haemophilus influenzae PittEE] # 1 89 4 92 96 70 35 3e-11 MNKSELIQAIADEAELSKRAAAEFVDAFVSVVTQELKDGNDVTLVGFGTFHTAQSAERQG RNPKTGEPLTIAARKTPKFRPGKALKDAVNG >gi|289656365|gb|ADEA01000002.1| GENE 21 13939 - 14370 569 143 aa, chain + ## HITS:1 COG:NMA1867 KEGG:ns NR:ns ## COG: NMA1867 COG4382 # Protein_GI_number: 15794755 # Func_class: S Function unknown # Function: Mu-like prophage protein gp16 # Organism: Neisseria meningitidis Z2491 # 1 143 17 159 159 248 99.0 3e-66 MNTDEQYKRKGLIAKIKIAQSQLGMEDDVYRAMLARVCGKTSCTQMNLAELQAVAAEMKR MGFKQTAPKGKGIRPHLTQDRAALLNKLEALLTVGDKSWQYADGMAKRMFGKDLVRFLTP EQLYKLVQALQIHINKAKKAAEQ >gi|289656365|gb|ADEA01000002.1| GENE 22 14367 - 14813 649 148 aa, chain + ## HITS:1 COG:no KEGG:NMA1866 NR:ns ## KEGG: NMA1866 # Name: not_defined # Def: putative integral membrane protein # Organism: N.meningitidis_A # Pathway: not_defined # 1 148 1 148 148 291 99.0 5e-78 MIRVDEEDFEAVRHLLPESVLALITIIGLTETVELVKNLGGTTYPLRQGRTKGSESRLAY LEEIVGGAAMEKMVEALAPCDLFIPKCEQALLELRDRHIRRRFDVQTGKGVPAYEAVNDL ALAHALTDRHIWRILKKPDNECEQGGLF >gi|289656365|gb|ADEA01000002.1| GENE 23 14861 - 15502 487 213 aa, chain + ## HITS:1 COG:no KEGG:NMA1865 NR:ns ## KEGG: NMA1865 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_A # Pathway: not_defined # 1 213 13 225 225 362 99.0 5e-99 MKTFYVLMLAAMLAACGGQENKPAAGESQTDNRAQQYQNQQKQIAARLADEEYFIGENNL EQIRLHANLKERAQKLLSLLAQADKESRVWVLPGDAAKIKEFNAAFAAVAKSAEESFGGP FLADKAGLYQCTAAANAAYDYFFARQRKDALTENYRQQYTDNIAACQGQIRTPPAAQATV YARKGIKLPLNNCLPVLAGDEEFDTYTCPMEVK >gi|289656365|gb|ADEA01000002.1| GENE 24 15634 - 16179 825 181 aa, chain + ## HITS:1 COG:NMA1864 KEGG:ns NR:ns ## COG: NMA1864 COG0860 # Protein_GI_number: 15794752 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylmuramoyl-L-alanine amidase # Organism: Neisseria meningitidis Z2491 # 1 181 1 181 181 310 88.0 1e-84 MSKIIVLTAGHSNTDPGAVNGSDREADLAQDMRNIVASILRDDYGLTVRTDGEGKGNLPL REAVKLIHGSDVAIEFHTNAAASKAATGVEALSTPKNKRWCQVLSRAVADVTGWKLRGDG GFKPDNAGQHSRLAYAQAGGIVFEPFFISNDADLKFFKERKWAICRAIATAIAMEVGAAR V >gi|289656365|gb|ADEA01000002.1| GENE 25 16116 - 16364 101 82 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298368503|ref|ZP_06979821.1| ## NR: gi|298368503|ref|ZP_06979821.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 67 1 67 82 118 100.0 1e-25 MGYLPRDCDGHCDGSGSGTGMKKGLIALAIAAVSGMRRPAISEFQITPTPAYQVRQHSSV RTGKSGVAAAKRAARKRKAGKK >gi|289656365|gb|ADEA01000002.1| GENE 26 16382 - 16639 214 85 aa, chain + ## HITS:1 COG:no KEGG:NMCC_0932 NR:ns ## KEGG: NMCC_0932 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_053442 # Pathway: not_defined # 9 84 1 75 78 141 92.0 7e-33 MTAGMDIKMRIFDIFKNPATGNVSHSKLWANVACAAGTFKFVMLPDPSAEIWAVYLGIVG GYAVARSFVSVKRQELESDHARETD >gi|289656365|gb|ADEA01000002.1| GENE 27 16620 - 17036 379 138 aa, chain + ## HITS:1 COG:no KEGG:NMO_0891 NR:ns ## KEGG: NMO_0891 # Name: not_defined # Def: putative phage associated membrane protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 17 135 19 137 139 85 40.0 7e-16 MPVKLIKYLPHLVAALLLAAALGLAYRAGFQTAYNEQQVIIEQAEKEKSAALLASSRAFA AELERANARQQEQAEKTKQAGIKLAAANAEIGRLKQQYRKGIHHAIEQDKSIAGNACIDG LGAHGLRQYRQALGYDAD >gi|289656365|gb|ADEA01000002.1| GENE 28 16930 - 17235 129 101 aa, chain + ## HITS:1 COG:no KEGG:NMB1087 NR:ns ## KEGG: NMB1087 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis # Pathway: not_defined # 23 101 23 101 101 100 69.0 2e-20 MQSNRIKALPAMLVLTAWALTGCANTAKPSDTMPIKVEVPVMPAPPAALMVPPVRPAPPE SGSTRALLEHAVEFGGYVAELENQNAAWRDWSDNHSRKVGD >gi|289656365|gb|ADEA01000002.1| GENE 29 17280 - 17450 335 56 aa, chain - ## HITS:1 COG:NMA1193 KEGG:ns NR:ns ## COG: NMA1193 COG3422 # Protein_GI_number: 15794137 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 1 56 1 56 56 105 100.0 2e-23 MYFEIYKDAKGEYRWRLKAANHEIIAQGEGYTSKQNCQHAVDLLKSTTAATPVKEV >gi|289656365|gb|ADEA01000002.1| GENE 30 17463 - 17681 166 72 aa, chain + ## HITS:1 COG:no KEGG:NMC0974 NR:ns ## KEGG: NMC0974 # Name: not_defined # Def: putative phage related protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 72 1 72 72 119 91.0 3e-26 MNEYTFSYRFNGKSWSLSIWADSPEEARAKFRAARENAQYDGEVIAKVCTFVNISWVNKL YKRIKYLMGIKE >gi|289656365|gb|ADEA01000002.1| GENE 31 17678 - 18022 453 114 aa, chain + ## HITS:1 COG:no KEGG:NMA1857 NR:ns ## KEGG: NMA1857 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_A # Pathway: not_defined # 4 114 3 113 113 203 97.0 2e-51 MTVYRELIERQLAVCQAGLQIGLQKANEQEPFIAAVAETLSRTMWGYAMRMDARFEVTFI VDLGHVAFEHQFTAVKQALKEKFEVEADGDALTVESDRLPYGIAACRVVFGDVL >gi|289656365|gb|ADEA01000002.1| GENE 32 18019 - 18300 260 93 aa, chain + ## HITS:1 COG:no KEGG:NMA1856 NR:ns ## KEGG: NMA1856 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_A # Pathway: not_defined # 1 93 1 93 93 167 100.0 7e-41 MSGDTPITVEYVFGTLVSFLIALLWYWVKSISDGLKEARKDRDELLGRLHSVETSYQTKA EAKDNRNEILNLLREIKADLKEVGQKIERKADK >gi|289656365|gb|ADEA01000002.1| GENE 33 18300 - 18515 306 71 aa, chain + ## HITS:1 COG:no KEGG:NMA1855 NR:ns ## KEGG: NMA1855 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_A # Pathway: not_defined # 1 71 1 71 71 95 100.0 5e-19 MQNQDPILRALAEINGKQDKLLQNQERMDAEIKKIHADCRRTSATTGAAAGAISGGIVAT GIAFARAKLGL >gi|289656365|gb|ADEA01000002.1| GENE 34 18518 - 19021 472 167 aa, chain + ## HITS:1 COG:no KEGG:NMA1854 NR:ns ## KEGG: NMA1854 # Name: not_defined # Def: hypothetical DNA-binding protein # Organism: N.meningitidis_A # Pathway: not_defined # 1 167 1 167 168 256 80.0 2e-67 MAHPKATRDKLRALYCNGEQSLETAAALCGVSLGTARRWRDEAKAQGDDWNKLRAAHTLA GGSIDEIARAMMTSFLVQYQATMTMLQDAEVEDLPPSKRVQLLASLADAFTKTVAANKRV LPEVQEAAVAIKVINRLVDYIDAEYPNMLANFDVVLQGFQGVIEKEF >gi|289656365|gb|ADEA01000002.1| GENE 35 19024 - 20676 1499 550 aa, chain + ## HITS:1 COG:no KEGG:NMA1852 NR:ns ## KEGG: NMA1852 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_A # Pathway: not_defined # 14 550 10 539 539 547 49.0 1e-154 MQGKLSRNELRARMSAIRADINRRISAADIGLSAAPADIAERRAKVMQCTPEAFRFFCKT YLPHYFPDDSESVFHTWAYTELPEIEKEPESVLQSCAASRGEAKTSLTVQAFSLWREVRN AKHNTVIVSDTEDQADAIVEAIKTELTDNPALQLDFPEVCGQGQVWRIGEIRTRQNNQFK AYGAGQGIRGAKKGEVRPDAVYLDDLENEKHSENIRLRDKLTKWIGSVINPLGGAGAKCD ILYVGTILCLDSVLARVLKNPFWRSVRFSAIMKWPVNMDLWAEWENIYRNTPKENRANEK AAQAFYEENEAAMLEGSEVSWSKRPLLALMKIRARDGIHVFNCEYQNQPGNPENAIFADF IDKSYYREMPHDVVFYGAVDPSMGKLGKGTDPSAILIGGYQRSTGTLYVAEARIKKRVPS LIIQEVIELQKRYKCKQWVIETVQFQEFFKDELVKESGKQGAHVPARGVKPTAEKNMRIE SIQLHFANGFIKLLPEQRVLIEQLREFPDADHDDGPDALQMLWAAAVSNTGKVEFMSVAK HSEKFGSGAW >gi|289656365|gb|ADEA01000002.1| GENE 36 20755 - 22314 1561 519 aa, chain + ## HITS:1 COG:NMA1851 KEGG:ns NR:ns ## COG: NMA1851 COG4383 # Protein_GI_number: 15794739 # Func_class: S Function unknown # Function: Mu-like prophage protein gp29 # Organism: Neisseria meningitidis Z2491 # 1 519 1 519 519 980 93.0 0 MKNIFSSALSKILPGRYTPKSTPQTAEITQNTQTHEHPSKGLTPQKLHGILEAAERGDMK AQSELFADIEEKDGHIFSEMSKRKRAVIGLDWRIMPPPNSSDAERQLAEEIGGWLEEITD FESMMFDLLDAVGHGFACVEIEWQQTGGLWLPKKFTHRPQGWFKVDSADNVRLAKQGNPD GEELWEFGWIVHKHRSRSGFLPRVGLMRTLVWPYLFKNYSVRDLAEFLEIYGLPTRLGKY AVGADETDKTTLLRAVKEIGHNAAGIIPETMNIELLNAASGSSDPFMAMVDWADKTSSKA ILGGTLTSMADGKTSTNALGQVHNEVRHDLLVSDAKQLARTITQQLILPLLRLNKGNVGM VRLPRFQFDTQLPEDMAVYAESLPKLVKIGMKIPLSWAQEKLAIPLASDGEPVLALQTAE SEGVKVAPLSYRRVALSRQGEILDMGQAAIDNAGLGKIALPEHIEPFLRGLGQALAEGDS YEGVQDRLLRAYPHLDSAEFQTALARVIFISDLWGRLNG >gi|289656365|gb|ADEA01000002.1| GENE 37 22307 - 23653 1163 448 aa, chain + ## HITS:1 COG:NMA1850_1 KEGG:ns NR:ns ## COG: NMA1850_1 COG2369 # Protein_GI_number: 15794738 # Func_class: S Function unknown # Function: Uncharacterized protein, homolog of phage Mu protein gp30 # Organism: Neisseria meningitidis Z2491 # 1 207 1 207 207 436 99.0 1e-122 MADLGFAFGLEPEAAVKYFEGLGYHIPPDWDVKWNEAQTKARTIAGIHRQDIVGEFHAAM YEAAKSGKSFEDWRDEVQGRLKAHDWHLLKDGDIVDGDTGEVLGRGITKHRMETIFRTQM QSAYMAGHWQAFEEGRDDAPWLQYSAILDSRTRQSHAAAHGAVYHIDDPFWDYFYPPNGF NCRCTVRALSDSDLKRRNLLPQKAQLEDTEVVVNRKGDTRPAKAVKLPDGRRFYTDAGFQ HNVGKSHLANLGQLQMQRAVELPPKLASVSIQTALKQPDLMRAVSQQAAQMVRRVDAEKV ARGKTLYVGALALPLLEVLATRKIYPQSAVIAISDERVLHALRDKKVKPLPVSFWERIPE LLQEPEQILLGKAGRNDDAKQFLAFVYPLPAGKGKLVVTLDYDVKTRHPFTGKKEHLTLN MVNTGMIAETDKQVDSLLYGYETIWKKP >gi|289656365|gb|ADEA01000002.1| GENE 38 23757 - 24254 390 165 aa, chain + ## HITS:1 COG:NMA1849 KEGG:ns NR:ns ## COG: NMA1849 COG5005 # Protein_GI_number: 15794737 # Func_class: R General function prediction only # Function: Mu-like prophage protein gpG # Organism: Neisseria meningitidis Z2491 # 1 165 1 165 165 293 96.0 7e-80 MIEIKINTDTLQNSLNAAARRTAHTKPLMTQLARIMRNAVLDNFAAGGRPAWAPRKYPAA REGSGLLQASGRLRNSITPSSTNDTAVVGTNVEYAAIHNFGGKTSPHLIRPKKGKALKFG GRFAKQVNHPGSNIPARPFMTLQPEDEKALSDAVAEYLAQAIQGR >gi|289656365|gb|ADEA01000002.1| GENE 39 24463 - 25527 1424 354 aa, chain + ## HITS:1 COG:NMA1848 KEGG:ns NR:ns ## COG: NMA1848 COG4388 # Protein_GI_number: 15794736 # Func_class: R General function prediction only # Function: Mu-like prophage I protein # Organism: Neisseria meningitidis Z2491 # 1 354 1 354 354 560 99.0 1e-159 MRAMDTKTLLAALSAAHVGGSDGLIKIVPKGQFAPVDGRTDTGVPHWTMSADLAQQIIAA FDAAQTDLVVDYEHATLKAAETGQQNPAAGWISKYVWDDERGLMGEVKWTQRAKDMIDSG EYRYLSPVLEYDTLGNVRGLHSVALTNSPALDGMALAALSRQNSINPKQETSMNKEALIK LLGLAADADDKAIEAALAEAQEKLGGKTLAEALAAPKEEPQGGEGDKGTAGKPEDKPQGG NADDGEVAELKAQVAALSKKVIAMEVGSTSDGLIRAALSDGRLLPHQEASARQLAAKDPE AFKALIDGSLALAALSKTQTGGKGGADGTSALTAEEAAVAAQLGISAEDYAKAK >gi|289656365|gb|ADEA01000002.1| GENE 40 25549 - 26451 1347 300 aa, chain + ## HITS:1 COG:NMA1847 KEGG:ns NR:ns ## COG: NMA1847 COG4397 # Protein_GI_number: 15794735 # Func_class: R General function prediction only # Function: Mu-like prophage major head subunit gpT # Organism: Neisseria meningitidis Z2491 # 1 300 1 300 300 617 100.0 1e-177 MIITPDTLKALFTGFKKNFQDGLKMAESQYKEIATVIPSSTASNTYGWLGQWPAFREWVG DRVFQDMKAHGYAITNKHFESSVKVNRNDIEDDNVGIYAPMMTEMGRASAVHPDELVFAL LKNAHATLCYDGQNFFDTDHPVYEKVDGTGQASTVSNIFAGSEAAWYLLDTTRALKPLIY QERKAKQFTAMTADTDEGVFMRNEYRYGVDGRCNVGLGFWQMAAKSQEKLDAAGFEKAYN AMVSLKGDGGRPLAIRPNVLLVPPALENAAKELVEGDRLANGAYNPNKGKAKVIVSPWLL >gi|289656365|gb|ADEA01000002.1| GENE 41 26489 - 26962 628 157 aa, chain + ## HITS:1 COG:no KEGG:NMA1845 NR:ns ## KEGG: NMA1845 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_A # Pathway: not_defined # 1 157 1 157 157 231 96.0 6e-60 MAKEKTGQEVGATVDVKPEEVTVTAALQAEIEALRAELDKANAEIQVAQAELAAAQERNA ELERLLEAGLAPGGISDGETLTPEAEAAFYTGSGAPAVDAEVVAIKSKHGHAFFRAGYHV QPHWTFVRRADFEPADFERLIGDRMVEAREALPTDAS >gi|289656365|gb|ADEA01000002.1| GENE 42 26959 - 27384 714 141 aa, chain + ## HITS:1 COG:NMA1844 KEGG:ns NR:ns ## COG: NMA1844 COG4387 # Protein_GI_number: 15794733 # Func_class: S Function unknown # Function: Mu-like prophage protein gp36 # Organism: Neisseria meningitidis Z2491 # 1 141 1 141 141 252 98.0 1e-67 MSYAAVADLVARFGEATITGLTDLSRKGVVDETIAQQALDDAAAEIDGYLMNRYTLPLPK PLRILTVYCCDIAVYRLCTGKRQLTEDIVHRYEAAVKFLQLVAAGKVGLGVTEPAGEKPA VQGNGVMFTTQEKVFGRDSVY >gi|289656365|gb|ADEA01000002.1| GENE 43 27425 - 28036 672 203 aa, chain + ## HITS:1 COG:NMA1843_1 KEGG:ns NR:ns ## COG: NMA1843_1 COG5003 # Protein_GI_number: 15794732 # Func_class: R General function prediction only # Function: Mu-like prophage protein gp37 # Organism: Neisseria meningitidis Z2491 # 1 128 20 147 147 250 96.0 1e-66 MVTGVFTYGGEFDGEGLAQVVNQFPAVWIMFAGIKDTVRHDTRGSRFKAIGQFTVLVGDR ASGSEADSRFGGLHRHDVGTYRLMQTVRHLLTNQSLGLQIGRLQPGAAKSLFSRQMEQDA VSVFALEFETYWFEDALQDGDWPRPAVSDGQQAKVYADVSEYQGRTEPEHPDFKGVNLEL RIPPKNLDQPADMAATVETKVKP >gi|289656365|gb|ADEA01000002.1| GENE 44 28033 - 28221 274 62 aa, chain + ## HITS:1 COG:no KEGG:NMA1842 NR:ns ## KEGG: NMA1842 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_A # Pathway: not_defined # 1 62 1 62 62 114 100.0 9e-25 MNETIKVRAADGLQVPLAGKPHEYITDQETVTVPDAAYYRRCIEYGDLVVVTEDTQPAKG SK >gi|289656365|gb|ADEA01000002.1| GENE 45 28221 - 29648 2254 475 aa, chain + ## HITS:1 COG:NMA1841 KEGG:ns NR:ns ## COG: NMA1841 COG4386 # Protein_GI_number: 15794730 # Func_class: R General function prediction only # Function: Mu-like prophage tail sheath protein gpL # Organism: Neisseria meningitidis Z2491 # 1 475 1 475 475 790 99.0 0 MASANINFEKIPASTRKPGVYAEWNTKLAVRNLPTNKQRVLIVAQHNNPALGELTELENV FSAADAAAKYGAGSMAHLMVTAAIKAYAYADLSLITVADNKAGVAAAGKITLSGTANTQG VLRVSIANADTLTIGIGAEDTAATVAAAVKAAIDAVPDLPVTATVAEAVVTLTAKNKGTA GNAIRIKTSNTAEGITAAVTAMTGGDANPDIAAALNAVVAEGHHIVACGINDETNLLKLR AHLDTVASPMEKRWAIGVYGQTGTLAQATTLAGRLNHGHIVSAWYRGTPSLPCELAAAFA AVMASEEDPARPLNTLALNSIGVCESKDKTMRTEQENALYNGVTPIETSPAGTQAQIVRA ITTYTKTANGTADESLLDVTTVRTLIYVSRACVDRIALRFPRDKLSDRTPPRVRSELIDV LMRCEELEILERVEENLPKLIVERDLQNTGMLNCRIPSDVVNGLHVVGMVVDLYL >gi|289656365|gb|ADEA01000002.1| GENE 46 29662 - 30036 622 124 aa, chain + ## HITS:1 COG:no KEGG:NMA1840 NR:ns ## KEGG: NMA1840 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_A # Pathway: not_defined # 1 124 1 124 124 223 100.0 1e-57 MSTEYVGSVILYLGANEVEVTKIDVKDNTGKKPVKTMNRTRRVKGFTRGVGQYDITFTAV VPTDGTAVDWAKIDDAKISLVPDVEGARPTSYLGFCATEAGDSYTVDNELVVDVTGFAIR KVLE >gi|289656365|gb|ADEA01000002.1| GENE 47 30077 - 30256 187 59 aa, chain - ## HITS:1 COG:no KEGG:Ent638_2907 NR:ns ## KEGG: Ent638_2907 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 20 57 273 310 384 70 71.0 2e-11 MKHLFLLVIVATVGIGSAEARGREPCSGSKGGIKACTADGKFLCKDGTLSKSKKICSSR >gi|289656365|gb|ADEA01000002.1| GENE 48 30425 - 30814 446 129 aa, chain + ## HITS:1 COG:no KEGG:NMA1835 NR:ns ## KEGG: NMA1835 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_A # Pathway: not_defined # 1 129 1 129 129 233 96.0 2e-60 MSEFSPELTRAIGDYELRVSPDLKTVTGRLKYGIGAIDGEMHHDFSMHLLTVREDMAIDP QLEGQPRLVAAYAASLDKLGGLTAESLTPDLLLDEMAAADFDALYWAQELLQKKRLCPLP APTVTDTPS >gi|289656365|gb|ADEA01000002.1| GENE 49 30856 - 31020 191 54 aa, chain + ## HITS:1 COG:no KEGG:NMA1834 NR:ns ## KEGG: NMA1834 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_A # Pathway: not_defined # 1 54 29 82 82 94 96.0 1e-18 MTQPELEGWLKQADLIERGRAAPVVMPWFIPAGVKPSVATGGQTQTFISKRKKK >gi|289656365|gb|ADEA01000002.1| GENE 50 31017 - 33161 2605 714 aa, chain + ## HITS:1 COG:no KEGG:NMA1833 NR:ns ## KEGG: NMA1833 # Name: not_defined # Def: hypothetical DNA-binding protein # Organism: N.meningitidis_A # Pathway: not_defined # 1 499 1 499 559 770 97.0 0 MSQHSVELVAKFKDNATPGLRRLAAEAEKTGSRQLQKAAAVKLKHQEMYSATARLGIRTE HQIRREIQQTQAAYNRLAKSGMASQRELARAAQVTRSRVRELTAEINGGASRLQRIGSGV RTIGRGVAGVAAGAAAGAYVLAQPVNRTMDFDTSLRHAANTMYAGKSMAEKRAGMAEIKK SVMDAAYVGGTTRDAALEAMNTMVASGAMSDEAVKKLLPTVMKTATAANTEGNDIANIVT KALQAGFKEADIPSLLDRALQSGADGGFELKDMSRWLPQQLAAMKNAGMGATLDNFSSLL NANQLSFMTAGNTDEAGNNLVNLLAKINSQDIVTKAKKITINGKEGFDFTASMNKRQAAG MNSLDALVDIVGEITAKDKKSAALMKQINAAQGDEAKLALLENQKALVDGTAIGKLVSDR QALMALLALVNNKQELTRLQAGQTNAAGAVDGAYGFVAEGSGFKKSQFSLAKSEAEYGAF EKFSDRIGGWMQSAAQWMRGHPEQAQTATQVGYGAAAASAAAGTSSMFGGGGLLSKLFGG SSRALQAGRLMPSASSLGPVALGAAPLAVMGGATHLAGQRDKYAEWSKPFAKLSSWLESI LPDFSAGAKAEYLRKREELGGNNAPLDSPVLKESMAQLNQSAQTNQQASQQYVQAAAENQ AATAQITGAAAQMTAAAAQMQAAAGKPIPITVTVQNGNIMAYVNQAVERNSRKN >gi|289656365|gb|ADEA01000002.1| GENE 51 33161 - 34528 1614 455 aa, chain + ## HITS:1 COG:NMA1831 KEGG:ns NR:ns ## COG: NMA1831 COG4228 # Protein_GI_number: 15794721 # Func_class: R General function prediction only # Function: Mu-like prophage DNA circulation protein # Organism: Neisseria meningitidis Z2491 # 1 455 1 455 455 866 97.0 0 MAWKDTLLDAGFKGVTFDVIDDTLRGTHALAEHEYPFVQGADIEDTGVSAMDMALTAVLW GEDYEGRLQNLLNVLRETGAGELIHPIYGSVPDCVVADFEVAHNEENPDYCTVRMTFKQS VKAAPFFDRDLPTALADEVDFLADLAAWQGFEVFQTALNKIQKAQSRWNAFHATVLMVVG VLYGQVNGIFTGGLNLLNSPRVLVAELKSVFGALANMHNVGKSGLDGWRDMVGGVSKAAA TPWQVSRGTEGSVAAVDLIQRAKPEDVAAFTAFTATVGACTLAEQAADILAVQLNEPTLT PVEISRLLADTRAALQRALAAQRILAMMLADETKADKLAYCLLRLYQTPADSADDVYQRI EAAGLLPQTPYLETAAELTESLRNTAHKLQKQAFAVINMKPPLVQKTVTRDIGLHLLAFE WYGDYSRFGELLRLNPQIRHPNFIEKGTVLNAYAR >gi|289656365|gb|ADEA01000002.1| GENE 52 34662 - 35651 1219 329 aa, chain + ## HITS:1 COG:NMA1830 KEGG:ns NR:ns ## COG: NMA1830 COG4379 # Protein_GI_number: 15794720 # Func_class: R General function prediction only # Function: Mu-like prophage tail protein gpP # Organism: Neisseria meningitidis Z2491 # 1 329 51 379 379 607 98.0 1e-173 MRAGDKVEVRVGGDTVLSGRIDRVQTVTEKGGKTLTIQGRDDAGVLLDCSAPLFNAQDMD LNQIIEKIVKPLGLAKIRIDAAKTDKTHKVQIEPGSRAWDALLEYAEANGLWPWLEPDGT LVIGGPDYTAAPVAELVLRTNGQNNNIKRLEVNRDMAARYSEVTVLAQSHSGKNNIKATA KDESVKLHRPLIVTEPDIDSQAQAQRKAKKRLADSRLEGLTITATVQGHRTDDGTLWQPG QRINVLSEPDGIDAVYFLMARTFTGGRGQPTETVLTLKEDGAWVLDADPPKKSGKTKRPS ESRKANGQAAAKPKKRRQAKQAGQELQVI >gi|289656365|gb|ADEA01000002.1| GENE 53 35652 - 36281 875 209 aa, chain + ## HITS:1 COG:NMA1829 KEGG:ns NR:ns ## COG: NMA1829 COG4384 # Protein_GI_number: 15794719 # Func_class: S Function unknown # Function: Mu-like prophage protein gp45 # Organism: Neisseria meningitidis Z2491 # 1 209 1 209 209 347 98.0 9e-96 MDAKTIDNRIRRAFNGIRQAFRGKIARVKAAGGVQQIQVEGLEGETVQDLEHAENFGFTS NPPAGSDCVVVPLGGKTSHGIIVTTTNGAYRITGLVEGETAVYNADGAKMVLKKGRIIEI DCETLNIKAPGGVNIDAPNVGCTAQITAEGQINGNGGMAVKGGSGTSFTGNVKMVGDLDT TGKLTNNGKSVGSDHKHTGDSGGTTSDPL >gi|289656365|gb|ADEA01000002.1| GENE 54 36342 - 36695 443 117 aa, chain + ## HITS:1 COG:NMA1828 KEGG:ns NR:ns ## COG: NMA1828 COG4381 # Protein_GI_number: 15794718 # Func_class: S Function unknown # Function: Mu-like prophage protein gp46 # Organism: Neisseria meningitidis Z2491 # 1 117 1 117 117 211 100.0 2e-55 MDALLNPQTGGYVVNQSAQSIENELYIRLVTPLGSYWADRTLGSRLHELRRQKHLKRIEV LAKQYAEQALQPVIQSKRAQSIQVTASAPQHGWLKLHIEAVDAAGDTVTLNHKVAVI >gi|289656365|gb|ADEA01000002.1| GENE 55 36692 - 37759 1000 355 aa, chain + ## HITS:1 COG:NMA1826 KEGG:ns NR:ns ## COG: NMA1826 COG3299 # Protein_GI_number: 15794716 # Func_class: S Function unknown # Function: Uncharacterized homolog of phage Mu protein gp47 # Organism: Neisseria meningitidis Z2491 # 165 355 1 191 191 366 99.0 1e-101 MTQALNLEQIRANYLRDLQNQNPAAHVHAGSDNHVRATAIAAVGEGQYQHQEWILRQAFA DTADSAYLEKHAAKYGIYRKTATFAGGKVRVRGAVGATVPVGQQINVGDKVYLTAESAVI GALGSAEIAVIATVAGSAQNQTAESAATLQSVPAGIDSSAVLLTMVGGTDAESDESLLAR YEERLRRPAAGGNQYDFRNWCLEVPGVVDAFIYPLRRGNGFVDAVILGENGIPSAETLAA VQAHVDAVRPVTRKNGFLALAPSIQTVNVAVTITLSSGTDTDTATAAIKSAVNAYFDALK PGDTLIKSQLETLISEVYGVRDRVLTTPVGNIKPQESAEDIYWLRPGSINVEYTT >gi|289656365|gb|ADEA01000002.1| GENE 56 37756 - 38322 756 188 aa, chain + ## HITS:1 COG:NMA1825 KEGG:ns NR:ns ## COG: NMA1825 COG3778 # Protein_GI_number: 15794715 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 188 1 188 188 365 99.0 1e-101 MSHQTLLAAMRPPVSYDTVGETAEIKAEAGVFDIVADHAEGVKNAPFPDAENDYLYRWEE LLAITPPAGANTQQRTDAVLAKLNALGGLSIAYFTAIAESAGYTVTIYEEDQFRAGESCA GDCLNTEDAIWRWCVDIADGKATAYIFRAGQSRAGDRISVYTDPIIETMFEELKPAWTYC RFEYEEEV >gi|289656365|gb|ADEA01000002.1| GENE 57 38325 - 40607 1391 760 aa, chain + ## HITS:1 COG:no KEGG:NMA1824 NR:ns ## KEGG: NMA1824 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_A # Pathway: not_defined # 1 760 1 760 760 1146 78.0 0 MDLIQTPNKQFVDGDRRTPGTPVPAWWLNQLQGELYSILNAVGIEPNKADHAQVLSAIKT LAADASQVASIDALRKYSGTGYVNVNAYHANTTVGGGVFVADKADKSTADNGCTVIVSTD GTRWKRVFSGMLNLHDFGYVASKNNALATLNAAETAALGIVVDCLGLSIDTGSNYPQKNK YTNGKFVINGKTVDVQYQAIRNGIGRFIAGSGAAASLKSGEWTGAGVVVIGEGAMGKTEK CVSAIAIGDRAQGFSRISRDNISIGADSLINVQADTEWYDQSKLSGTRNIGIGGNAGRGI TSGSSNVAVGRNSGQGIGTGSSNVALGAASLAGTAPIGLTGDIEVFWPSPTSLTVAIGEA VLQMYQGRDAQTAVGGSAAKNAKAAEKMTVVGASALENLERNRAPNGGDVLWRGTESGSY IQNGHDITLNFGNIRGAQVGYWVGIRLTSGEAATVQGDVVPVEVTAAAGNSLTIRSPKEL NASGNAELKYVYSTSSAAAKNEELTVIGTNALKSAVSGAYTTVVGADAMSSSDNPQKTVA IGASALRNGTHLSSVALGYWCAPTISSEQSVFIGDSAGYRNIQGDVLSGKITNSIAIGYG ARLGGSNEIQLGMFNQTLYAPSAVNIRSDARDKADIKPLSLGLDFVNKLKPVTGVYDRRD AYTDELFTDLPQGERTEKLREWWKNPTKDGRYKEDRIQHWFIAQDVAALEAEYGALPMIN FRQDTYTIEYEMFVPVLTKAIQEMAARIETLETEIKELKK >gi|289656365|gb|ADEA01000002.1| GENE 58 40604 - 41227 428 207 aa, chain + ## HITS:1 COG:no KEGG:NMA1823 NR:ns ## KEGG: NMA1823 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_A # Pathway: not_defined # 1 207 1 207 207 262 68.0 5e-69 MTRCVIDSDGLFVEEQYFDDGRQSIEAELPEYSDGKAARWNGSKWEIIPDYRGQIVYSNG REIFWDKAGELPEGVSLTGAESVDLSVLKSAKISRLNSVAQAFINTAAEIDKVPDFEVQT WAFQAAEVRAWATDKTASTPILDQIAASRGIDADKLKEAALRKTLAYEKLTAHVAGQRQA LQSKIEAAKTQAALEKIVIEFTAPEAV >gi|289656365|gb|ADEA01000002.1| GENE 59 41599 - 42435 695 278 aa, chain + ## HITS:1 COG:no KEGG:NMA1821 NR:ns ## KEGG: NMA1821 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_A # Pathway: not_defined # 1 278 2 279 279 557 99.0 1e-157 MQKYHSTAPLPFVGQKRYFIKHFTKVLSQIPADGKHWTIVDVFGGSGLLAHVAKRIKPQA RVIYNDYDNYSDRLRHIPDYNRLREQIAQIVGGIPKGSRLDPERTRSVQQTITNFQGHID VRVLSSWLLFSAKQANSLEQLLGFEFYNKVRQSPYSIAADYLDGLEITRQDYNLLMAEHQ HNPNTLLVLDPPYVSTAQGAYAADKYFNMVSFLRMIQYMRPPFILFSSTRSEALDYFQFL QECEPDKYRRFSGYNIVSLDAKMGKGIEYQDNMIYKID >gi|289656365|gb|ADEA01000002.1| GENE 60 42487 - 42828 475 113 aa, chain - ## HITS:1 COG:no KEGG:DNO_0103 NR:ns ## KEGG: DNO_0103 # Name: not_defined # Def: hypothetical protein # Organism: D.nodosus # Pathway: not_defined # 1 95 1 95 98 96 53.0 3e-19 MKQYTLDPKALLGGIIAQDNDQEIVQLSLQKNNEIPTYETDAIILLLVLNGSAQIVSTQG TLETKGLQVVRLEPNEAHSIRALEDATNILVIKQLTHYKAARTLAPFRKIFDT >gi|289656365|gb|ADEA01000002.1| GENE 61 43009 - 43767 1023 252 aa, chain + ## HITS:1 COG:NMA1693 KEGG:ns NR:ns ## COG: NMA1693 COG0496 # Protein_GI_number: 15794586 # Func_class: R General function prediction only # Function: Predicted acid phosphatase # Organism: Neisseria meningitidis Z2491 # 1 245 1 245 248 402 75.0 1e-112 MNILICNDDGYLAPGIAVLARVAGEFANVRVVAPERDRSGVSNSLTLDRPLHIKQAQNGF YYVSGTPTDCIHLGLHALPDFRPDLVFSGINNGANMGDDTLYSGTVAAATEAYLMGIPAV AFSLNDYSGRYWETAEKAAWMMIDRLVKTPPKLPVLWNVNIPAVASDEIQGIKITRLGRR HHEQSVVPMRNPRGEPIYWIGPVGDISDREEGTDFGECEAGFITVTPLQIDLTDYAQLEG VVRFWEGTVKAE >gi|289656365|gb|ADEA01000002.1| GENE 62 44003 - 44950 739 315 aa, chain + ## HITS:1 COG:NMB1483 KEGG:ns NR:ns ## COG: NMB1483 COG0739 # Protein_GI_number: 15677336 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Neisseria meningitidis MC58 # 85 315 175 415 415 252 65.0 5e-67 MLKKTAFYAVPAALALLVGACTTQQPAPVVAGTSGGGSAASSSNPYGATPYEPNAGNNPA ESAPYTPPASQSYPAASSGGYIPSNAPVDINAATHTVVRGDTVYNIAKRYQITQDNLRAW NNMADNTISVGQVLRVKPAGYTAPAGGAATSAARTQPPAASSATPNVPSTPQANTSKVAT PATTPTVSTGGVRNTGGITWQRPTAGNVITKFGGTNKGVDIAGNPGQPVVAAADGKVVYA GSGLRGYGNLVIIQHSPTFLSAYGHNQSLLVNEGQTVKRGQTIAKMGNSDASRTQLHFEV RQNGKPVNPANYVAF >gi|289656365|gb|ADEA01000002.1| GENE 63 45228 - 45872 599 214 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298368539|ref|ZP_06979857.1| ## NR: gi|298368539|ref|ZP_06979857.1| hypothetical protein HMPREF9016_00205 [Neisseria sp. oral taxon 014 str. F0314] # 1 214 15 228 228 421 100.0 1e-116 MNGVTSAQFISAGIHLYPKCGYRQLSEKAIAEHLNSDMETFNQMFADKDEFVKAMLIEYS NRALGRVSFDFAQNIEETERLYQIVWRLAVTIREHLVWIHRMLLDSAEGVELMTKALKKQ HKMLAYGMIQHIKACNGREDMSELELFNQFEFLNGAIISPMIMNTRYRLMGILTDEMNEK HEDLLTDSAIHQRINWAFQALFPQYRSQKHPAKN >gi|289656365|gb|ADEA01000002.1| GENE 64 46011 - 46664 376 217 aa, chain + ## HITS:1 COG:no KEGG:Bpro_3451 NR:ns ## KEGG: Bpro_3451 # Name: not_defined # Def: TetR family transcriptional regulator # Organism: Polaromonas # Pathway: not_defined # 9 214 12 214 217 70 27.0 4e-11 MSESARTKFIAAGEKLYPELGYSKLSVRLLAAEAELSSGMFHHLFENKDVFMLEMFRHYN ITAFGRLDFADVPDEPFARLYYAAFAIAQSVRDNLLFIQRIFTDSADNIAIANEFLKSEM EERTRVIVGLLEECAAIDDGVPTATIQRLGYLSSAVIAPMVLGTRFNSMGLLSDELSRNV GALLTDEAISQRLEWAVCAMFPSRLECVGIRSDRKKQ >gi|289656365|gb|ADEA01000002.1| GENE 65 46661 - 47734 1263 357 aa, chain + ## HITS:1 COG:PM1983 KEGG:ns NR:ns ## COG: PM1983 COG0845 # Protein_GI_number: 15603848 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Pasteurella multocida # 3 356 44 367 368 243 42.0 5e-64 MKKNTAMKKVVSIAVIAALAAGGFWYYRQHHNGKLPEWIAQSNGRLELNRIDVASLYPGR VKAMPAEEGAEVKAGDVLAELSSETSGSRLEEAQAAEARQQEAVSRARAAEAQMKQTVAR AQANVAASRQQQRVAKMELDNARKLFADQLVSQSEVTKRQADYERAAAAVKAAEAARDEA QATVAQSAAAQAEAKAAVAQAKAAVKSASFANDDMNIRAPISGRVEYKIAEVGNVVASGS KVVSLLDPNDVSMNIFLPTGSISRLKVNDDARIRLDGIDAVFPAKIQFIATDAQFTPKAV ETIDERAKLMFKVKLRIPRETAAKYNRLLKGGMTGNGFVKTDGKAAWPSELAVKLPQ >gi|289656365|gb|ADEA01000002.1| GENE 66 47816 - 48541 819 241 aa, chain + ## HITS:1 COG:PM0161 KEGG:ns NR:ns ## COG: PM0161 COG0778 # Protein_GI_number: 15602026 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Pasteurella multocida # 1 240 1 241 242 329 63.0 3e-90 MSLTDLLNRRRSVRHYDETPVDADTVRRCLQTAQLAPSSSNMQLYEFYHVTDPAVLKRLA AACLSQRAAETAQQAVVFVTRQDLHRRRAQAVSEFERGNIERNSPPEKHAKRIKASEMYY GRMLPFLYSRCFGLFGAFRVALAWCIGLFRPVMRDLSENDMRNVVHKSCGLAAQTFMLAM AEADYDTCPLEGLDSRMVKRILKLPRGAEINMIVVCGIRKPGRGIWGERFRLPFEEVYRR I >gi|289656365|gb|ADEA01000002.1| GENE 67 48610 - 49179 770 189 aa, chain + ## HITS:1 COG:CAC0018 KEGG:ns NR:ns ## COG: CAC0018 COG2249 # Protein_GI_number: 15893316 # Func_class: R General function prediction only # Function: Putative NADPH-quinone reductase (modulator of drug activity B) # Organism: Clostridium acetobutylicum # 1 189 1 189 200 92 28.0 3e-19 MATTVIYAHPYEGSFNHAILQETQKLLAAKNEACRVIDLYAEGFNPVYSKEELALFNQGQ ALDPLVQKYQQMIKESRRLIFIFPIWWADMPAIVKGFLDKVLLKQFAYVESKTGLKGLLD IDEVLVVSTSTAPTFYLKYFCGNTVGKAMLGHTFKGVGAKRCKWVNCGRVNLAAQEKRQA FLSALAGVV >gi|289656365|gb|ADEA01000002.1| GENE 68 49330 - 49596 344 88 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298368544|ref|ZP_06979862.1| ## NR: gi|298368544|ref|ZP_06979862.1| hypothetical protein HMPREF9016_00210 [Neisseria sp. oral taxon 014 str. F0314] # 1 88 43 130 130 134 100.0 2e-30 MQALCVFQLVSVDLFLTAAAAYLLACTQMAGVRREIAYFIAAYLGVWGVVWLVQLKVAGC GGKNYYLLGQWIMFFLCSGLMAWGAQAL >gi|289656365|gb|ADEA01000002.1| GENE 69 49657 - 49845 389 62 aa, chain + ## HITS:1 COG:no KEGG:TDE0354 NR:ns ## KEGG: TDE0354 # Name: not_defined # Def: general stress protein 14 # Organism: T.denticola # Pathway: not_defined # 5 62 126 183 184 79 67.0 4e-14 MKTLIAEALRPFELTVRYINADYQPAFAFHTIDSNAGYDEAAAGPVARGAEDYLAHLDTY YQ >gi|289656365|gb|ADEA01000002.1| GENE 70 49897 - 50643 1026 248 aa, chain + ## HITS:1 COG:STM3079 KEGG:ns NR:ns ## COG: STM3079 COG0596 # Protein_GI_number: 16766380 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Salmonella typhimurium LT2 # 18 235 66 296 318 86 25.0 6e-17 MPTIHYQGADLFYRTGGKSDAPAMLLLHGGLGSAQDFAAILPKLQRYFFVIEADTRGHGR STRGTAVPTYAQIADDARHIVQALGLDEYHVFGFSDGGIAAYRLAARDERVQSVITVGAS WHSRQLEPVREMFENLTPAFFRENMARQVAVYEALNPQPDLDTLTADLRRMWLDISASGY PNERIAAVKAPVLAVRGERDGLFSLSDLADLHSCLPEAHLMNIPFARHEAIKEQPEILWA AVKAFYVL >gi|289656365|gb|ADEA01000002.1| GENE 71 50745 - 51350 609 201 aa, chain + ## HITS:1 COG:FN0105 KEGG:ns NR:ns ## COG: FN0105 COG4832 # Protein_GI_number: 19703453 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 13 201 13 204 204 197 53.0 7e-51 MKYEWKKAQKACYNIKAVPTLTDVPAQSFIMIDGEGNPNAPDFSERVSALYALAYAVKMD YKKASAGCEIDDFTVYPLEGIWRRKTQGTLVKEDLVYTIMIGQPDFITAEMVASALEKVR VKKPNPLYDEIRFERMAEGKCVSILHQGAFDDEPASFAKLDGFCNEKGLKRNSDYHREIY LNNLNRTAVEKLKTILRYTVE >gi|289656365|gb|ADEA01000002.1| GENE 72 51469 - 54291 3445 940 aa, chain + ## HITS:1 COG:PM1982_1 KEGG:ns NR:ns ## COG: PM1982_1 COG1131 # Protein_GI_number: 15603847 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Pasteurella multocida # 1 504 1 505 543 688 68.0 0 MNTVSIQNLSHRYGKTLALDDVSLDIPKGATVGLIGPDGVGKSTLLSLMAGVKVIQDGRV EVLGGDMADKDVRRDLSHRIAFMPQGLGRNLYPTLSVYENIDFHARLFGLDGQERTRQIA RLMEATRLAPFSGRAAGKLSGGMKQKLSLCCALVHSPDLLILDEPTTGVDPLSRRQFWAL VDDLRREHAGMTVIVATAYIEEAQRFERLLAMDAGRLLENKPTAAVLADYGTDVLEEAYV KMLPPEKQQGSGGLDITPFVPDPDAPPAMEAHGLTKRFGDFTAVDHVSFTIQKGEIFGFL GSNGCGKSTTMKMLTGLLEATEGAATLLGKPIDAGGLDTKMRVGYMSQAFSLYEELSVRR NLDLHARLYQMGAKGAAAVEEALQQFDLADVADTAPASLPLGIRQRLQLAAACLHHPEVL ILDEPTSGVDPAARDMFWRHLLKLSREDKITIFVSTHFMNEAARCDRISFMHKGRVLAVG TPAELAARQNAPDLEEAFVQYLIEAESDNGYSEQGGLGQNPTIPSDSASWVSTQPTATVE FSDDPEKHHPRPSETPSVTPDTQSFKYRFSMIWTFARREAKELLRDKIRLFFAVFGPLII MASVSWGISFDVRNLKFAVYDRDQTAASRELVEYFDGSRYFLQQPPIQSEAEIDTVLKSS GAILVIDIPSGFGRDLARGLKPEVGFYVDGSMPFNATNIRGYIGSLITAYTKDRIAESGL PVSLKAPAGIEPRFMYNQDFDSINAIAPGVMMLVLMMIPAMMSAVGVVREREIGSIANFY ASPAAVAQYLIGKQLPYIAVGMVNFAAMMLMIIYLFGVPLKGSFAGLAVGTLLMVSASTA LGLLISCFVRSQLAAIFATAIITMIPAQTYSGFIYPLSTMEGGALIIGKTFPSSWYYTVS VGSFTKGLHTADLLHEYAAIAAFAATSLILACVLLKKQEK >gi|289656365|gb|ADEA01000002.1| GENE 73 54369 - 54719 208 116 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157165407|ref|YP_001467497.1| 30S ribosomal protein S8 [Campylobacter concisus 13826] # 1 116 1 117 117 84 35 2e-15 MNRATLFDGLAERYGVAAEYPWAKSPDFAVFRHTGNRKWFCLYMPVPSEKLGMGEGGLTE IVNVKCRPEHIGAWRATAGILPAYHMNKEHWLSIVLAQTPAENVWRLIDDSFVLTR >gi|289656365|gb|ADEA01000002.1| GENE 74 54757 - 55449 1162 230 aa, chain + ## HITS:1 COG:PM1626 KEGG:ns NR:ns ## COG: PM1626 COG1794 # Protein_GI_number: 15603491 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Aspartate racemase # Organism: Pasteurella multocida # 1 230 1 230 230 258 54.0 4e-69 MKTIGIIGGMSPESTVLYYQIINRETNRRLGGNRSAKILLDSVDFEEIVRLQKSGDWAAA GNVLAQSARKLEAGGADFLLLATNTMHKVAPAIEQAAGIPLLHVVDATAAAIKRQGLSAV GLLGTRFTMSDGFYTERMGSQGVQTIAPTAAEQDEIHRIIFDELCLNRIRPESARYFYDV IGRLKNEGAQGVILGCTEICLLVNETDSPLPVFDSTAIHALSAVDAALAE >gi|289656365|gb|ADEA01000002.1| GENE 75 55556 - 56668 1563 370 aa, chain + ## HITS:1 COG:PM1981 KEGG:ns NR:ns ## COG: PM1981 COG0842 # Protein_GI_number: 15603846 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Pasteurella multocida # 2 369 3 373 374 337 49.0 2e-92 MRTLKNILTLMLKEFRSVLTDPVLMVLIGYIFTATIYQMAQVGADLKNATVGIIDQDRSV LSMRIRDAVQHPFFKPVEDVRREDSDELMDKGEFTFILEVPPNFQRDMAAGRNPDLQLLV DATSMTQAGVGASYLSQIINREIYEFTGAPRPELINPVINTYYNPNGESAWFMPTSQIGS MSCMLLILLTGAAVIRERERGTIEHLLVMPVNAFELMMGKVLANAAVIWVAALSSLWFIV HLSIGVPLIGSVPLYAVGLALFLFSVASLGIMIATFASTMGQFGMLMLPVYIVMNLFAGG ASPRSNMPHAAQLISEYWPLTQFVKFSQDILFRGAGIEIVWGHMLIMGCIGVGFLWLALL RFQGMLERQG >gi|289656365|gb|ADEA01000002.1| GENE 76 57049 - 58506 1694 485 aa, chain + ## HITS:1 COG:PM1980 KEGG:ns NR:ns ## COG: PM1980 COG1538 # Protein_GI_number: 15603845 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Outer membrane protein # Organism: Pasteurella multocida # 17 485 14 463 463 330 41.0 4e-90 MKFNQIHLLCIAAALALAACKNTEVPLNSQVQLPQAFTQDAAAKGDADIGTWWQQWNDPV LSGLIAQGLAQGHDVKIAVSRLNEARAVAGAARADLGPTVGLSGKVGANYSKMDNPLDSN ARALLSRYPQASSLNGDTIESTGTSMYGGLTASWEPDIFGKKRSDADAARYAALGQQELA YGAQMLVAGDIADNYFKARAAQGRLKTADQTVATLRRMVRYIEGRFKAGHVSGYEVNEAK VQLTAAEAKRATIGAEYAAYVRSIAVLTGNVPQTFTLPESSADVLARQPSAPGGQTPQGL LERRPDLRAQAAQVNAYAAKFASAKADLLPRFTISFMGQGGRIGVDGDRSLTGWASLLSV GIQMPLFTNGRIKANIKAADARLQTALLEYDKRLLTALGEVDSAYQGVESLSRQTELLQT AHNQAARHAADTEKMFRNGYKTLDVALKAHIAEGQMQENLISARLARVQMLVSLYKALGG GWSAK >gi|289656365|gb|ADEA01000002.1| GENE 77 58959 - 61238 3244 759 aa, chain + ## HITS:1 COG:NMA1501 KEGG:ns NR:ns ## COG: NMA1501 COG0209 # Protein_GI_number: 15794401 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, alpha subunit # Organism: Neisseria meningitidis Z2491 # 1 759 1 759 759 1482 95.0 0 MNAPTDLKVTKRDGRLENLDLDKIHRVVTWAAEGLKNVSVSQVELKSHIQFYNGIRTDDI HETIIKAAADLISQDTPDYQYLAARLAIFHLRKIAYGEFEPPHLFDHVKKLTDAGKYDRH IIEDYSREEFDELNAYIDHSRDMTFSYAAVKQLEGKYLVQNRVTRQIYETPQFLYILVAM CLFSKYPKETRLDYVKRFYDAVSTFKVSLPTPIMSGVRTPTRQFSSCVLIECDDSLDSIN ATTSAIVKYVSQRAGIGINAGRIRGLGSEIRGGEAQHTGCIPFFKMFQAAVKSCSQGGVR GGAATLFYPLWHIEAESLLVLKNNRGVEDNRIRQLDYGVQINRLLYTRLIKGGNITLFSP NEVPGLYDAFFADQDEFERLYTKYEQDPNIRKRTLSATDLFSTLMQERAGTGRIYIQNVD HCNTHSPFDPRVAPVHQSNLCMEIALPTKPLDNINDPNGEIALCTLSAFNLGALNSLDEL EGLADLTVRALDALLDYQDYPVEAARTATMNRRTLGIGVINYAYYLAKNGVRYSDDSALG LTHRTFEAMQYYLLKASVNLAKEYGACPLFNQTIYSQGKLPIDTYKKDLDAVCSEPLLCD WESLRADIVKYGLRNSTLTALMPSETSSQIANATNGIEPPRGLVTVKASKDGILKQVVPE FETLKDAYETLWQLPGNEGYLKLVGVMQKFVDQAISANTAYDPSKFEGNKVSMKQMLKDL LTAYKYGVKTLYYHNTRDGADDTQTDIQDDGCAGGACKI >gi|289656365|gb|ADEA01000002.1| GENE 78 61549 - 62703 1679 384 aa, chain + ## HITS:1 COG:NMB1288 KEGG:ns NR:ns ## COG: NMB1288 COG0208 # Protein_GI_number: 15677155 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, beta subunit # Organism: Neisseria meningitidis MC58 # 1 384 1 384 384 748 95.0 0 MSCEHLVMSYSTFSKTKNDALKEPMFFGQPVNVARYDQQKYEVFEKLIEKQLSFFWRPEE IDVSRDRIDYANLPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSIPELETWIETWS FSETIHSRSYTHIIRNIVNDPSVVFDDIVQNEYIIARAEDIACYYDDLIEYTQYYNLLGE GTHNVGGKLVTVSLRELKKKLYLCLMCVNVLEAIRFYVSFACSFAFAERELMEGNAKIIK LIARDEALHLTSTQHMLNLMRAGADDPEMAEIAVELQDECFKLFKKAAEQEKEWAAYLFK DGSMIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWINAWLSSDNVQVAPQEV EISSYLIGQIDSEVSADDLGDFEL >gi|289656365|gb|ADEA01000002.1| GENE 79 62790 - 63092 234 100 aa, chain + ## HITS:1 COG:HI1309 KEGG:ns NR:ns ## COG: HI1309 COG0633 # Protein_GI_number: 16273221 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Haemophilus influenzae # 7 80 8 81 82 90 56.0 8e-19 MILISTHDKTFELQEGETLLEGLERTGHEVEYQCRSGYCGSCRVKILDGRVSYDDFPLAF VAPGEILPCCCRVHEDIKVDCRGRVSEPDLFDVGLFDEQD >gi|289656365|gb|ADEA01000002.1| GENE 80 63299 - 64033 1180 244 aa, chain - ## HITS:1 COG:NMB1039 KEGG:ns NR:ns ## COG: NMB1039 COG1636 # Protein_GI_number: 15676926 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 1 244 1 241 241 473 92.0 1e-133 MNQHDTPQVTPIDRPVLVPPGGHKKVLLHSCCAPCSGEVMEAMLASGIDYTIYFYNPNIH PLKEYMLRKEENMRFADKFGIPFIDKDDDYENDRKEWFAKAKGMEFEPERGIRCTMCFDM RFEKAAQYAHENGFPVFTSSLGISRWKNMAQINDCGHRAAAPYDDVVYWDFNWRKGGGSA RMIEISKREHFYQQEYCGCAYSLRDSNAHRKSQGRIPIKLGVLYYGDESTQYENIQPNKI AVDK >gi|289656365|gb|ADEA01000002.1| GENE 81 64336 - 65739 2336 467 aa, chain + ## HITS:1 COG:NMB1029 KEGG:ns NR:ns ## COG: NMB1029 COG1027 # Protein_GI_number: 15676916 # Func_class: E Amino acid transport and metabolism # Function: Aspartate ammonia-lyase # Organism: Neisseria meningitidis MC58 # 1 464 1 464 465 874 94.0 0 MTVRIEHDLLGDREIPAEAYWGIHTLRAVENFKISNQKISDVPQFVRSMVMVKKAAAQAN GELGAVKPEIAAAIEKACDEVLLKGRCLDQFPSDVYQGGAGTSVNMNTNEVIANLALEIL GYEKGRYDIVNPMDHVNASQSTNDAYPTGFRLAVYYSVGELLEKLALLKDAFAAKADEFK DVLKMGRTQLQDAVPMTAGQEFQSFQVLLEEEILNLDRTRALLLEVNLGATAIGTGVNTP KGYAALAVKKLSEVSGLDCKLTENLIEATSDCGAYVMVHGALKRTAVKLSKICNDLRLLS SGPRAGLKEINLPEMQAGSSIMPAKVNPVIPEVVNQVCFKVIGNDTTITFAAEAGQLQLN VMEPVIAQCMFETISLLGNAAVNLAEKCVKGITVNREICERYVFNSIGLVTYLNPYIGHG NGDLVGKICAQTGKGVREVVLERGLLSEAELDRILSPENLANLHRGT >gi|289656365|gb|ADEA01000002.1| GENE 82 65808 - 67022 1988 404 aa, chain - ## HITS:1 COG:NMB1473 KEGG:ns NR:ns ## COG: NMB1473 COG0436 # Protein_GI_number: 15677327 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Neisseria meningitidis MC58 # 1 404 1 404 404 810 93.0 0 MEKFPKSSKLDHVCYDIRGPVHKKALQLEEEGHQILKLNIGNPAPFGFEAPDEILVDVIR NLPTSQGYCDSKGLYSARKAIVHYYQTKGLRDITVNDVYIGNGVSELITMSMQALLNDGD EILIPAPDYPLWTAAATLAGGTVRHYLCDEENDWFPNLADMEAKITPKTKAIVVINPNNP TGAVYSKEILLEIAELARKHGLIIFADEIYDKILYDGAVHHHIAALAPDLLTITFNGLSK AYRVAGFRQGWMLLNGPKEHAKGYIEGLDMLASMRLCATTPMQHAIQTALGGYQSINELI LPGGRLLEQRNKAWEMVNQIPGVSCVKPMGALYMFPKIDTEMYGIRDDMKFIYDLLVREK VLLVQGSGFNWIRPDHFRIVTLPHVYQIEEAMDKLERFLRSYRQ >gi|289656365|gb|ADEA01000002.1| GENE 83 67167 - 70430 3451 1087 aa, chain - ## HITS:1 COG:PA5114 KEGG:ns NR:ns ## COG: PA5114 COG5373 # Protein_GI_number: 15600307 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Pseudomonas aeruginosa # 199 700 174 672 1201 301 41.0 5e-81 MQYFSLLIPIIIGYIANDIWSGVVVGSILWLAAGQAGRLRAEARRNHHPDETEKRFQALQ SEIDRLKLRLSVLEQGGDAAENQAPPPSLAVFCPAPESSAVEDTAEVEAASAYTSPAFSI PDITRTDGVQTASASLPETELEPETRPSEQSASESTDVDTAQAHPVYKIISAQQGPSENA LPADEGDDGFKFSENPIVAWFLRGNPLLKTGIVVLFLGLAFLLRYASERIYVPVEMRYLT VAGAGLAAVIGGWELQSRKREYGLVLQGFGVAVMYLTSLAALKLHPLLSAPIVFVLMVAM VVLMALLAIRQNAQIMAQVALVGGLAAPILVSDGSGNYLVLFSYLSLLNAGVAAIAWFKA WRPLNLTGFAGTFSIAALWGMQSYTPQHFATTEPFLIYHWLLYTFIAYLFARRKLTESRE DTLAPVADNATLEEIWNSLCSHGLRVHVLDHTLLFGTMAAAFGLQYRMVEHWPSADAFSA LGFATVYGLAALMLKRQQGLYILRQAFVALSLLFLTLAVPLHFERGNTVILWTVESALVY FFGLRQQRPHMRLGALVVYLLAALTQMSGYQEGESTILQGQWFTTLLTLFGGAAIYLQWH LYRRKGSAHWEHTLQNATLCAALLYTSILPLLFFAERGSIIVFSALVAAWAFCRGKGKSD VFSTFALGNAIFILLFQASINNESNGFLTHWHLFAAAPLLFAAAYALQYPRVQTEASENQ DKQDQTLPFSQIAGWAILVIALMLGGFATYTQWTGEETLFIELWALPIFTTLLLLANRLN WKELFQTTLAFLPLFALHFIGYHLEHLWTAAAALPLAAATVLNFVILNNCRTNAPIDLHK LNIIMLGILWSLWAGMYVGDRLDGVWSQLSWLAVPLIMWIVLHTQRQRGFFRRHQAAYQH FALPIAALAAASWMIWTNFSTPFQPAPLPYIPLLNPLELACAGMLWFALKSLPEALPAEY RRVNAPGVAALAFMVISAGVMRLWHFYDGITWRLDIMLQSFGLQASLSVVWAVTAIILMV YGNRRKLRPFWITGAALMAVVVVKLFLIELANSGGIARIASFIIVGVLLLLVGWFAPVPP KGDEKEE >gi|289656365|gb|ADEA01000002.1| GENE 84 70646 - 72121 2303 491 aa, chain - ## HITS:1 COG:FN0454 KEGG:ns NR:ns ## COG: FN0454 COG1012 # Protein_GI_number: 19703789 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Fusobacterium nucleatum # 6 491 3 491 491 627 62.0 1e-179 MAKDLNVFDKEYGLLINGVWTKPGALLDSYNPANGELLAKFTDASDADVDAAVAAAQGAF KTWRKTTTTERAAILNKIADVIDDNLELFALQETLDNGKPIRETRAADIPLASDHFRYFA SVIRGEEGTATQLDSEDLSIVLREPIGVVGQIIPWNFPFLMAAWKIAPALAAGCTIVIHP SSSTSLSLLSFAQKINHLLPKGVLNVITGRGSKSGEYMLRHKGFNKLAFTGSTEIGRHIG IAAAEMLIPATLELGGKSANIFFDDMPFDKALEGAQKGILFNQGQVCCAGSRIFVQEGIY DKFVNALAEEFKKIKVGLPWEDDTQMGSQVNAGQLETILKYVKIGEQEGCRIITGGKKLE GELGKGEFVEPTLIEADNNNARVAQEEIFGPVATVIKFKTEEEVVKMANDSEYGLGGAVW SKDINRCLRVSNALETGRVWVNCYNRLPAGAPFGGYKTSGIGRETHKMMLAAYTQVKNIY ISTREEREGLY >gi|289656365|gb|ADEA01000002.1| GENE 85 72587 - 73630 1633 347 aa, chain + ## HITS:1 COG:NMB0546 KEGG:ns NR:ns ## COG: NMB0546 COG1064 # Protein_GI_number: 15676452 # Func_class: R General function prediction only # Function: Zn-dependent alcohol dehydrogenases # Organism: Neisseria meningitidis MC58 # 1 347 1 347 348 611 95.0 1e-175 MKMQAVVVNQNVAGDVEVVERELRPLEYGEALVEVEYCGVCHTDLHVAAGDYGEKPGRVL GHEGIGIVKEVAPGANALKVGDRVSIAWLFQSCGSCEYCNTGRETLCRSVLNAGYTADGG MATHCIVDADYAVKVPDGLDPAQASSITCAGVTTYKGVKVSGVRPGQWIAVYGAGGLGNL GVQYAKKVFGAHVVAIDINDEKLAFAKESGADLVINAAKEDAAKVIQEKTGGAHAAVVTA VSAAAFNSAVDCVRAGGRVVAIGLPPESMDLSIPRLVLDGIEVVGSLVGTRKDLEEAFQF GAEGLVVPKVQLRALDEAPAIFQEMREGKITGRMVIDMKKECGCGHH >gi|289656365|gb|ADEA01000002.1| GENE 86 73807 - 74265 408 152 aa, chain - ## HITS:1 COG:VC1199 KEGG:ns NR:ns ## COG: VC1199 COG2020 # Protein_GI_number: 15641212 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Putative protein-S-isoprenylcysteine methyltransferase # Organism: Vibrio cholerae # 2 152 5 155 155 89 37.0 3e-18 MNLETKIPPPAICFICALLMYASAQVSALAGILPRFPVLLSVVLIAFGTALGVLGVWAFR RVRTTVSPFNPEQTEHFVSDGVYRFSRNPMYAGMGFWLAAWAGHLAHPLPWLFLVVFAAY MTRFQIMPEERVLARKFGAEYEAYCRRVRRWL >gi|289656365|gb|ADEA01000002.1| GENE 87 74341 - 75084 1329 247 aa, chain - ## HITS:1 COG:NMA1016 KEGG:ns NR:ns ## COG: NMA1016 COG1187 # Protein_GI_number: 15793972 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Neisseria meningitidis Z2491 # 5 247 10 252 252 397 86.0 1e-110 MEHDSNETMRLSKRMAQLGLCSRREADSYIEQGWVKVNGQTAALGQKVTERDRIDLNRQA HEKQAERVTILLNKPVGYVSAQAEKGYKSAAELITADNRWEGDDSRIPFSEKHKFGLAPA GRLDIDSVGLLVLTQDGRIAKQLIGENSGSEKEYLVRVRGKLDEKGLALLNHGLSLDGEK LRPAKVKWQNEDQLRFVLKQGKKRQIRRMCELVGLRVIGLKRIRMGKVKLGKLPPGKWRY LRADESF >gi|289656365|gb|ADEA01000002.1| GENE 88 75189 - 76067 1226 292 aa, chain - ## HITS:1 COG:NMB0764 KEGG:ns NR:ns ## COG: NMB0764 COG0697 # Protein_GI_number: 15676662 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Neisseria meningitidis MC58 # 6 289 13 296 301 358 74.0 5e-99 MPATNRSHAAPLLVVGCVIFGLGSLIVKFVHVGSYAIAFWRLAIAAVIFWLLARFFGQKL PQNRKAAYTALLSGVFLAFDLALWHESIHAVGPGISTLLNSLQIFFLSAIGFFFYRERLN KLQVLSLLLAVVGVALIGSPEFGHNGNAVWGFVSGIISGAMLALSMVFVRKTHQIEPVPL FPVMMILSFGGAVSLIIPALVFDGGTLYPTTLRDIGWVLVYGAVMQCFAWGLIAYSIPML SLSLTGLLLLSEPVAALLIDYFLLHKPINGLQWGGAALTLAAIYLGSQKPKP >gi|289656365|gb|ADEA01000002.1| GENE 89 76426 - 76800 305 124 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298368566|ref|ZP_06979884.1| ## NR: gi|298368566|ref|ZP_06979884.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 124 1 124 124 135 100.0 7e-31 MKLNKVYTTLFVSLAVMAGSAHADAIGSVADAAKSIFGGSKVNTDVTIGTFTNGSNVDAK AEAQGRGSKAMAGGVVATSGGSGAAVNTKVTLGVFDNSSVRAKAKAGDGAEAYAGGVISA SKDK >gi|289656365|gb|ADEA01000002.1| GENE 90 76915 - 77307 228 130 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298368567|ref|ZP_06979885.1| ## NR: gi|298368567|ref|ZP_06979885.1| hemagglutinin family protein [Neisseria sp. oral taxon 014 str. F0314] # 1 130 1 130 130 185 100.0 7e-46 MKNILFVNVFGLCYLGLVPASDAWSNPFTDIIVKQAKGEAEKAQKGNSDDGGVTAGIFTG GSQVNAAATASGKGSKAMAGGVVSSTTNNKKNAKGVSATADFSNARIDATATASGGKSAY AGGRVITPRE >gi|289656365|gb|ADEA01000002.1| GENE 91 77364 - 77942 248 192 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298368568|ref|ZP_06979886.1| ## NR: gi|298368568|ref|ZP_06979886.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 192 14 205 205 326 100.0 5e-88 MSKFPVFFVFVMPLAVFASPPSSITDKGSISQRGSVVAEKANNVRTEQININGLQGGQVI NSGNKLIVKGGTITTKPGQNQNKPLIEIKNPRNKEIYIENTRIVTDGFAQDNKDGSAGVV VVENGKKKNARDTSKIHMKNVHVESRNSEINARATSSSGSVACAGVVCTDEDVDSKVIVK IKGKNKFKAIAK >gi|289656365|gb|ADEA01000002.1| GENE 92 77957 - 78892 780 311 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298368569|ref|ZP_06979887.1| ## NR: gi|298368569|ref|ZP_06979887.1| hypothetical protein HMPREF9016_00235 [Neisseria sp. oral taxon 014 str. F0314] # 1 311 7 317 317 614 100.0 1e-174 MKAIALIVLACFSLSSCATLDLKMTRKKYASEKYRKKVQDIADLRSQQISENNTFYGKKL QCLSDMHKDFFMASQQAALQNGITTGNGRFRISVAPMRDKTGKVFEGSSTVLSDMVMDSL MKFKHFDVVETPLAPDNLAESRNNFIKPTYNLPAGLIQGFAATMTSLQHMPIGVMFPSNY YISGAITQYDETNVIPNKDINADLDAYQFSRGMQAMTVSVNLRLIDSDTGTVVRVAGMDD LAGVNLTNTFYSVKNGHNFFRLIGTKDYGIDYSVQVGDPKMAAVKEIIDKGVYELLDKFL KPYQVYKDQNC >gi|289656365|gb|ADEA01000002.1| GENE 93 78911 - 79462 495 183 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298368570|ref|ZP_06979888.1| ## NR: gi|298368570|ref|ZP_06979888.1| hypothetical protein HMPREF9016_00236 [Neisseria sp. oral taxon 014 str. F0314] # 1 183 1 183 183 313 100.0 3e-84 MFDKCLFLRRLFLVSGMLAFNVSAYGEVLIINTQTLDPATLTVQPSTSNVGTKGRSAQTG SGKKRGEAAPVRSDASFIDSTKALLLERYGYQEKSAAVASRSRLIQDLALKIDEIGRSSA SEKMVSELKGIMNQLNTEIGRSSADLSKFELTEFQQLYRAEQQNASQLKQLQAKLNKVPV VSE >gi|289656365|gb|ADEA01000002.1| GENE 94 79533 - 80876 2152 447 aa, chain - ## HITS:1 COG:NMA1429_1 KEGG:ns NR:ns ## COG: NMA1429_1 COG0108 # Protein_GI_number: 15794338 # Func_class: H Coenzyme transport and metabolism # Function: 3,4-dihydroxy-2-butanone 4-phosphate synthase # Organism: Neisseria meningitidis Z2491 # 87 290 1 204 204 370 92.0 1e-102 MTITDLRRLNLRQWIADKYGGQQSRFAEAASVNQGELSSLLKNKSFGEKKARKIEQAASM PDMWLDTPHDTGRAGTGPNNPKESRKMTAISTIPEILADIKAGKMVIITDAEDRENEGDL LMAAQFVTPEAINFMIKNARGLVCLPMEEQMVENLGLPMMTQKNGAQYGTNFTVSIEAAQ GITTGISAADRALTIQTAVSPSAKPEDIVQPGHIFPLRAQKGGVLVRAGHTEAGVDLARM SGLIPAAVICEIINDDGTMARMPELMKFAETHGLKIGTITDLIEYRSRTESLLEEMGDAP VQTPWGEFQQHVYVDKLSGETHLALVKGKPSADTETLVRVHEPFSAMDFIQPNPRHSWPL PDALQRIQQADGGVVILMHRAEDGATLLDRTLPKGANQAYKWDSKSYGIGAQILANLNVK KLRVLGQPSSFTGLTGFGLEIAGFEEK >gi|289656365|gb|ADEA01000002.1| GENE 95 81142 - 81747 712 201 aa, chain + ## HITS:1 COG:no KEGG:Pcryo_0464 NR:ns ## KEGG: Pcryo_0464 # Name: not_defined # Def: hypothetical protein # Organism: P.cryohalolentis # Pathway: not_defined # 3 200 22 240 255 153 36.0 3e-36 MKSFFRWLTVLLLCAAAGFGGWYYHDRGADDAHEVLSREGVLMQIKKVNRLESTAFYIDT IIRTEKKGNWRMLWQDAQSGIFIVRGKVLAGLDLDKLTAENVNIVDGKVILSLPPVEILS VDLENIEVYDMKTGSFNLLPADKGVFKTVQERARAQVLASACKADILQHANRQAQLQLEN LFALTQTQVSVYPAAVPVCKG >gi|289656365|gb|ADEA01000002.1| GENE 96 81815 - 82108 518 97 aa, chain - ## HITS:1 COG:no KEGG:NT05HA_1184 NR:ns ## KEGG: NT05HA_1184 # Name: not_defined # Def: hypothetical protein # Organism: A.aphrophilus # Pathway: not_defined # 1 95 2 96 97 119 67.0 5e-26 MTQHTDITLTFEEILAASRCRRDWLLELIEEEIISVNGRPEQTLYSGFQLARIRRAQRLS RDFDAGIPALGLIMRLLDEVEELRKAQQPLSLLNEGK >gi|289656365|gb|ADEA01000002.1| GENE 97 82120 - 83064 1656 314 aa, chain - ## HITS:1 COG:STM1112 KEGG:ns NR:ns ## COG: STM1112 COG2214 # Protein_GI_number: 16764470 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone # Organism: Salmonella typhimurium LT2 # 1 304 1 291 306 216 42.0 6e-56 MAEKTYYEILGVDKTADADTIKKAYRKLVRKYHPDVSKEPDAAERTAEINTAYETLSDRE KRAEYDELLANPYGRSAGGNPFGGAQSGGFRYEYRGGEPFGAGDFNFEDLFAGFGRSQRH AHARPDGPIKGEDQHAELSIDIYAAYVGAERSLNLNVPTVDEYGRVGYQTKTLNVKIPKG ITEGQQIRLAGQGLPGYNGGANGDLYLKIKFHDKPDLYVKNKKDVYQTIDVKPWEAVLGG KIIVPTAAGRLQVNLPANSQNGKSIRLKGKGIPAKEAGDLYLNIRISVPKAESEADRAAW AQLAAHFDGKSASN >gi|289656365|gb|ADEA01000002.1| GENE 98 83257 - 84492 787 411 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 4 398 14 419 447 307 40 1e-82 MNQLKLAVSGAQILFVAFGAMVLVPLLTGLNPSLALLGAGIGTLLFQIVTKRKVPIFLGS SFAFIAPIIYSIKTWGLPSTMFGLFAAGFMYFVFAALIKWRGLATVNRLLPPVVIGPVIM VIGLSVAAAASEMAMGKSGGNQVVGYADALILSGFTFAVTVVVSVFGSRMMKLVPILIGV AAGYILALVMGLVDTATIAAAPWFAVPHFETPQVNWQAALFMLPVAIAPAIEHIGGIMAI GNVTGNNYTKDPGLDKTLAGDGLGVCVAGLIGGPPVTTYGEVTGAVMITKNSNPVIMTWA AIFAIAMAFFGKFNAFLASIPLPVMGGIMLLLFGTIASLGIKTLVDAKVDLMQPKNLVIV SSVLTVGVGGMAVHVGTLSFAGVGLCAILAIVLNCLLPTPKTEIKSFSDPA >gi|289656365|gb|ADEA01000002.1| GENE 99 84863 - 85570 749 235 aa, chain + ## HITS:1 COG:NMA1514 KEGG:ns NR:ns ## COG: NMA1514 COG0283 # Protein_GI_number: 15794408 # Func_class: F Nucleotide transport and metabolism # Function: Cytidylate kinase # Organism: Neisseria meningitidis Z2491 # 20 235 3 218 218 312 75.0 4e-85 MRPTFKIACSRFQEEELSIKQKVIAIDGPSASGKGTVALRVAQALGFDYLDSGALYRLTA LYAEKRGVGWHNEEAVAQLAENLPVRFEETRIMLNDEDVSVQIRSEAIGMGASAIAQLPK VRAALLQRQRDFLTEKGLVADGRDMGSVVFHDAVLKVFLTASAQVRAQRRARQLGLPCEG VEFDRILSDIEARDEADRRRPVAPLRQLPDAVLLDTTDLGIEESVKKVLDWYHKL >gi|289656365|gb|ADEA01000002.1| GENE 100 85744 - 87423 2713 559 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|241758882|ref|ZP_04756995.1| ribosomal protein S1 [Neisseria flavescens SK114] # 1 559 1 559 559 1049 95 0.0 MENFAQLLEESFTLQEMNPGEVITAEVVAIDQNFVTVNAGLKSESLIDVAEFKNAQGEIE VKVGDFVTVTIESVENGFGETKLSREKAKRAADWIALEEAMENGDILSGVINGKVKGGLT VMISSIRAFLPGSLVDVRPVKDTSHFEGKEIEFKVIKLDKKRNNVVVSRRAVLEATLGEE RKALLENLQEGTVVKGIVKNITDYGAFVDLGGIDGLLHITDLAWRRVKHPSEVLEVGQEV EAKVLKFDQDKQRVSLGMKQLGEDPWNGLTRRYPQGTRLFGKVSNLTDYGAFVEIEQGIE GLVHVSEMDWTNKNVHPSKVVQLGDEVEVMILEIDEDRRRISLGMKQCQANPWEEFAANH NKGDKISGAVKSITDFGVFVGLPGNIDGLVHLSDLSWTESGEEAVRKYKKGEEVEAVVLA IDVDKERISLGIKQLEGDPFGNFISVNDKGSLVKGTVKSVDAKGAVIALSDEVEGYLPAA EWSSERVEDLRNVVKEGDEVEAIVATVDRKNRSIRLSVKAKDAKENREALNSVNAAATAS AGTTSLGDLLKAKLSGDQE >gi|289656365|gb|ADEA01000002.1| GENE 101 87434 - 87748 440 104 aa, chain + ## HITS:1 COG:NMA1516 KEGG:ns NR:ns ## COG: NMA1516 COG0776 # Protein_GI_number: 15794410 # Func_class: L Replication, recombination and repair # Function: Bacterial nucleoid DNA-binding protein # Organism: Neisseria meningitidis Z2491 # 1 104 1 104 104 184 95.0 4e-47 MTKSELMVRLAEVFAEKNGTHLMAKDVEYSVKVLVDTMTRSLARGQRIEIRGFGSFDLNH RPARIGRNPKTGERVEVPEKHVPHFKPGKELRERVDLALQQTAN >gi|289656365|gb|ADEA01000002.1| GENE 102 87961 - 89106 882 381 aa, chain + ## HITS:1 COG:NMA1520 KEGG:ns NR:ns ## COG: NMA1520 COG1485 # Protein_GI_number: 15794414 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Neisseria meningitidis Z2491 # 1 381 1 380 383 669 84.0 0 MSNSENLFVPPEFDNHSPLTWYQAASQKPGFIRDEAQARAIEHLDRLWTELMMFKRKRNR FLGRSLRSPQVPKGLYFYGGVGRGKSFLMDAFYGCLPYRRKRRVHFHAFMAEIHRRLKGL KSEANPLKAVAAEIAEETRVLCFDEFHVSDIADAMILGRLLENLLNEGVVLVATSNYAPS ELYPQGQNRSSFLPTIALIEANLTVLNVDGGEDYRLRTLKPAEIFFVPDNDENEQKLSDL FKNMSGGVAAEAGISVIHGREIPHKAKSEQVIWFDFRALCFGPRSQADYLYLAEHYEIVF LSGLERLTPQEKAEARRLTWLIDVLYDYRVKLCATSKVGVDDIYVEGDFAQEFTRTASRM AEMQSEAYLKLPHLTLNAPKS >gi|289656365|gb|ADEA01000002.1| GENE 103 89292 - 89717 472 141 aa, chain + ## HITS:1 COG:NMA1521 KEGG:ns NR:ns ## COG: NMA1521 COG0105 # Protein_GI_number: 15794415 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside diphosphate kinase # Organism: Neisseria meningitidis Z2491 # 1 141 1 141 141 231 81.0 4e-61 MAIERTISIVKPDAVAKNIIGQIYSRFEQNGLRIVAAKMKHLSVREAQDFYAVHKERPFY ADLVAFMTSGPVMIQVLEGENAVAKNRELMGATDPANAAPGTIRADFAESLSINAVHGSD SLENAAIEISYFFSQSEICPR >gi|289656365|gb|ADEA01000002.1| GENE 104 89948 - 91042 1105 364 aa, chain + ## HITS:1 COG:NMB1308 KEGG:ns NR:ns ## COG: NMB1308 COG0820 # Protein_GI_number: 15677174 # Func_class: R General function prediction only # Function: Predicted Fe-S-cluster redox enzyme # Organism: Neisseria meningitidis MC58 # 1 364 1 364 364 707 92.0 0 MKTNLLNYDLNSLTRHFAEMGEKPFRAKQVMRWMHQAGAQNFDEMTDLAKSLRQKLIEGA TIEVPKLMAAQESSDGTRKWLLDVGTGNGVETVFIPETDRGTLCISSQVGCALECTFCST GRQGFNRNLTAAEIIGQLWWANKAMGVTPKNERVISNVVMMGMGEPMANFDNVVTALSIM LDNHGYGLSRRRVTVSTSGMVPQMDRLRDAMPVALAVSLHASNDEVRDKIVPLNKKYPLK ELMAACQRYLVKAPRDFITFEYVMLDGVNDNAQHARELIDLVRDVPCKFNLIPFNPFPHS GYERSSAENIRVFRDILQQAGFVVTVRKTRGDDIDAACGQLAGQVKDKTRRQQKWQQIVI QQQG >gi|289656365|gb|ADEA01000002.1| GENE 105 91046 - 91801 696 251 aa, chain + ## HITS:1 COG:NMA1523 KEGG:ns NR:ns ## COG: NMA1523 COG3063 # Protein_GI_number: 15794417 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein PilF # Organism: Neisseria meningitidis Z2491 # 9 247 11 249 253 352 74.0 4e-97 MKLKIWQPLLLVLALSACAGHSGPSAREREEQVSNIRTQLALEYMRAQDYREATRAIEEA LKANHKNAVAWLVRAQIYQFLKVDDKAQESFLKALALKPDSAEINNNYGWFLCGKLNRPS EAMPYFDKALSDPTYPTPFVANLNKGICSAKMGQYSLSEAYLKRALAANAQFTPAFKELA RTKMMAGNLHDADYYFRQYQSKVDMLMADDLLLGWKIANALGKVQAAYEYEAQLRTNFPY SEELQAVTKRH >gi|289656365|gb|ADEA01000002.1| GENE 106 91805 - 92674 516 289 aa, chain + ## HITS:1 COG:YPO2880 KEGG:ns NR:ns ## COG: YPO2880 COG1426 # Protein_GI_number: 16123072 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 10 282 8 338 345 60 23.0 3e-09 MDNKQSGGFDALAAKTLGGELRSMRKKQGIDIDTVAERLKLSIEQIEALEKGEYSLLPGI VFVTGFLRSYARLLKWDEQEFAGRLKMVVPDERGHVYAVERQAGKKGFDYRQNEKAAFPK WILGVAVGILFGGGIYAWQNKSNQETAYQNQQDSSAVQNSMQAPALKASNVTVSKMPDEK IADKVQAANASEASAVAASAEEVPVSVAPDELWLKVQYRSNLIVKDKNGKMVFSQIIPEG SERRFQGGAPYDVWIGISTGAQANFGGKEIPVKPYKAGARAASFIAGKK >gi|289656365|gb|ADEA01000002.1| GENE 107 92678 - 93943 896 421 aa, chain + ## HITS:1 COG:NMA1524 KEGG:ns NR:ns ## COG: NMA1524 COG0821 # Protein_GI_number: 15794418 # Func_class: I Lipid transport and metabolism # Function: Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis # Organism: Neisseria meningitidis Z2491 # 1 421 1 421 421 762 89.0 0 MNTLKRRKTHQVKIDHIIVGSDAPVIVQSMTNTDTADAAATAQQVKELSDAGSEMVRITV NSPEAASKVAEIRQRLDDMGYHTPLIGDFHFNGERLLAEFPDCGKALSKYRINPGNVGKG AKGDEKFAYMIRTAAENDKAVRIGVNWGSLDQSLAKRMMDANLAATSPRPPEEVMKEALI VSALESSEKAVNLGLPEDKIILSCKVSSVQDLIQVYRDLGGRCKYPLHLGLTEAGMGSKG IVASTAALSVLLQEGIGDTIRISLTPEPGSSRTQEVIVAQEILQTMGLRSFTPMVTACPG CGRTTSTVFQELAQDIQNYLRNKMTVWRDLYPGVESLNVAVMGCVVNGPGESKLADIGIS LPGTGETPIAPVYIDGERKVTLKGDNMAAEFLAIVEDYVKTNYGEGGSKRNQNRIIPILT I >gi|289656365|gb|ADEA01000002.1| GENE 108 94176 - 95162 426 328 aa, chain + ## HITS:1 COG:NMA1093 KEGG:ns NR:ns ## COG: NMA1093 COG0462 # Protein_GI_number: 15794041 # Func_class: F Nucleotide transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoribosylpyrophosphate synthetase # Organism: Neisseria meningitidis Z2491 # 1 328 1 327 327 568 93.0 1e-162 MAAYDSLMVFTGNANPELAQRVVKHLGISLGNASVGKFSDGEVAIELLENVRGRDVFILQ PTCAPTNDNLMEILTMADALKRASAGRITAAIPYFGYARQDRRPRSVRVPISAKLVANML YSAGIDRVLTVDLHADQIQGFFDIPVDNIYATPILLNDINQQRIENLTVVSPDIGGVLRA RAVAKALNADLAIIDKRRPKANVAEVMNIIGDIQDRTCLIVDDMIDTANTLCKAASALKE RGASRVLAYATHPVFSGEAINRIASSDIDQVVVTDTIPLSDAAKTCGRIRQVTIAGLLAE TVRRISNEESVSYLFNEDVMITGSMLLP >gi|289656365|gb|ADEA01000002.1| GENE 109 95226 - 95798 863 190 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|59800883|ref|YP_207595.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae FA 1090] # 1 190 1 190 190 337 88 2e-91 MSYEIQAAIREQQGTGASRRLRREGQIPAILYGEDQKPISISVDHKTIFYALEKESFHTA LIKLALNGKTYDVIVRDFQMHPFRREVQHIDFQVVKANQLLRIRVPLHIVNAENSQAVKL QGGRVSLLNTSVEILALPSNIPAFLDLDCASVEAGDILHLSDIKLPEGVESVSLKRNENL AVATVTGKKR >gi|289656365|gb|ADEA01000002.1| GENE 110 95970 - 98108 1143 712 aa, chain - ## HITS:1 COG:NMB1297 KEGG:ns NR:ns ## COG: NMB1297 COG0741 # Protein_GI_number: 15677164 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Neisseria meningitidis MC58 # 1 712 1 658 658 633 52.0 0 MAKLKTIALTISGLSVLSGTTHAQAASTETDSSSNKLGMAMMRLNSSLLDQAQTNKHPSG SLWASLRKDFRINEVNTELVRRHESKFAANSGYFDRTINRSKPYMYHIANEVKKRNMPAE IALLPFIESAFVTKAKSHVGASGLWQFMPSTGRHYGLEKTALYDGRHDVYASTNAALNYL EYLHSMFGDWTLALAAYNWGEGNVGRAINRARAQGLEPTYENLRLPNETRNYVPKLLAVR NIVSNPQMFGLNISEINNQPYFKSVNVDKAIDNSTIARFANISESELLALNPGFNAPVFI PKNNRKLLLPASAIATFEKNYRNAKPENLLSWDIYSTADNTNLSTIAAETGMSVAELKRL NNIGSNSVSANRSILVAKNNSSNNKLEQTHTVDIDITPDSYRPSVPRTEQIVKAEKPTDL ATASSQTITSAIDFVSRSKTDSETHMAISKNNESTAKKQGIAANLVAKEIDTQINSNPMI ASAASEKTSNQPALSTLSDNGSDSTQTDAIAKLALQANSPATTISLNQTVTEQDDELMSL VKNNETDSAATNALTITEAKVTTHTDEPATAQQARIEKIAENRIKQKHRIESRLARAEQK TQRVASTTGTHKVSDGDTLFNISQRYNLSVADLITANNIKGNNIQKGQVLRIIASPAKNK TSNIKNVSYTVRKGDTLNTIANQFNLDINDIRRWNRNTRAVSPGQRLNLLGS >gi|289656365|gb|ADEA01000002.1| GENE 111 98329 - 99027 253 232 aa, chain + ## HITS:1 COG:NMB1296 KEGG:ns NR:ns ## COG: NMB1296 COG0500 # Protein_GI_number: 15677163 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Neisseria meningitidis MC58 # 8 206 4 201 221 199 52.0 3e-51 MIENQGVWFEETLVGRYVAEKEKYFFESNTQSSAAMGNIVQLGMDSWLRPSESIIYIPTD VVMDGTALAWAAQSLDILLMPHSHEYCQQPYVALVEAARVLKSGGRLVISGFNLSSLWGM SGWFDGNLLPEKKNCFTLPVFKKKVLSLGFEIEYGKFMVYVPPVKTESGLKFWQFMEKAG DRWWPAAAAVYGLVLVKREAGLTLLPEVENLLATEDVALGAARVDSLKLFIG >gi|289656365|gb|ADEA01000002.1| GENE 112 99240 - 100286 1325 348 aa, chain - ## HITS:1 COG:NMA1243 KEGG:ns NR:ns ## COG: NMA1243 COG1613 # Protein_GI_number: 15794178 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type sulfate transport system, periplasmic component # Organism: Neisseria meningitidis Z2491 # 31 343 39 351 351 446 68.0 1e-125 MSKIRYLAIGTIAALLVVAACSGGKTAAGGGKYMKILNVSYDVSRDFYKEYNPLFIREFT KKHPETDLHVQQSHGGSSKQALSVANGLPADVVTMNQSSDIDTLQARGLIRPNWQSRLPD KAVPFTSTTVFLVRKGNPKHIRDWDDLTRPDVKTVFANPKTSGNGRYAFLSAYGYGLKTS GGDEAQARQFTRAILNNVPMFENGSRAATTSFTRRDIGDVLVTLENEANFVSKKLENGRF EIVYPSYTAAADSPVAVVDKNAEKKESQAAARAYLEYLWSKPAQELAARMYFRPSDKEIL ARHKADFPDLDTFRPAELFGGWSQIMQKFFADGGMFDQLTAERKPQEQ >gi|289656365|gb|ADEA01000002.1| GENE 113 100467 - 100898 534 143 aa, chain + ## HITS:1 COG:NMB0797 KEGG:ns NR:ns ## COG: NMB0797 COG2867 # Protein_GI_number: 15676695 # Func_class: I Lipid transport and metabolism # Function: Oligoketide cyclase/lipid transport protein # Organism: Neisseria meningitidis MC58 # 1 143 3 145 145 253 83.0 7e-68 MKKVEKNVLVLHSAEQMFELVDRVEDYPKFLPWYSKTEIIERSGNELKARLFMDYMRVQQ SFATHNHNIPGKEIRMDLLEGPFKTLRGTWKFIDLGGDMCKIEFKLEYDFSSALLSAVIS PVFSHLTGTLVDAFIKEADRRYA >gi|289656365|gb|ADEA01000002.1| GENE 114 100891 - 101175 445 94 aa, chain + ## HITS:1 COG:NMA1005 KEGG:ns NR:ns ## COG: NMA1005 COG2914 # Protein_GI_number: 15793961 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 92 1 92 92 115 70.0 3e-26 MLEIEIAYGLADRQELHIMRVEEGTTVRQAALRSPIAERFPDVDLNTAPLGIFGKVVKDD TVLRAHDRIEVYRPLLIDPKDARRKRVQDKEEGR >gi|289656365|gb|ADEA01000002.1| GENE 115 101221 - 101796 844 191 aa, chain + ## HITS:1 COG:NMB0795 KEGG:ns NR:ns ## COG: NMB0795 COG0193 # Protein_GI_number: 15676693 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptidyl-tRNA hydrolase # Organism: Neisseria meningitidis MC58 # 4 191 5 192 192 333 89.0 2e-91 MPKIKLIAGLGNPGREYEQTRHNAGFWFLDELAWQWKASFKDEKKFFGEVARVGLPDGDV WLLKPMTFMNRSGQAVAALAQFYKIKPEEILVVHDELDIPCGRIKFKLGGGNGGHNGLKD IQARLGTPDYYRLRLGIDHPGDRNLVVGYVLNKPSAEHRRQIDDAIRKSLEAMPAILAGE WEEAVRFLHSK >gi|289656365|gb|ADEA01000002.1| GENE 116 101858 - 102388 293 176 aa, chain + ## HITS:1 COG:no KEGG:PG1200 NR:ns ## KEGG: PG1200 # Name: not_defined # Def: hypothetical protein # Organism: P.gingivalis # Pathway: not_defined # 28 164 27 163 170 142 47.0 6e-33 MWAKIPVYLGVAAVCGAGLLYITGLLLPETRSLSKTIVFDAPIDIVYCTVTDNRHWHYRT SPDDLRIVSENAGREVWLETTGGITIRFETLDKHYPDHYAFKMEHRLFDGIWTAELEAVS ANRTRFTATENIRYKNPFVRAVGHALMDLDKMMRTYQDELAAELARQTRISPSETD >gi|289656365|gb|ADEA01000002.1| GENE 117 102409 - 102615 312 68 aa, chain + ## HITS:1 COG:no KEGG:NGK_0536 NR:ns ## KEGG: NGK_0536 # Name: not_defined # Def: putative ring dioxygenase beta subunit # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 1 66 1 66 68 89 69.0 4e-17 MTELLDLIRNESAGTVGETLDFWLYECSMDEAPSAAEVTQWRDILNARGGRFSRLAALCQ TWLDEEQP >gi|289656365|gb|ADEA01000002.1| GENE 118 102612 - 103001 425 129 aa, chain + ## HITS:1 COG:no KEGG:NMB0794 NR:ns ## KEGG: NMB0794 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis # Pathway: not_defined # 1 113 1 113 120 125 63.0 4e-28 MKLPANKFTLFAAAWFAAGIYALVFRESGNAPPPFPHFDKAAHFALFFAQIWLLAKAFIH DGLKIPYRGLLVFALLFAAGSEWAQAAFTATREGSVGDGIADMLGASAALWLAAKTAAVK KAAGRPSAQ Prediction of potential genes in microbial genomes Time: Thu May 26 13:03:36 2011 Seq name: gi|289656364|gb|ADEA01000003.1| Neisseria sp. oral taxon 014 str. F0314 cont1.3, whole genome shotgun sequence Length of sequence - 73590 bp Number of predicted genes - 75, with homology - 72 Number of transcription units - 44, operones - 20 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 31 - 279 492 ## gi|298368596|ref|ZP_06979914.1| conserved hypothetical protein - Prom 309 - 368 4.2 2 2 Tu 1 . - CDS 395 - 958 873 ## Psta_2515 lipolytic protein G-D-S-L family - Prom 1017 - 1076 5.3 3 3 Tu 1 . - CDS 1088 - 1345 419 ## gi|298368598|ref|ZP_06979916.1| hypothetical protein HMPREF9016_00264 - Prom 1380 - 1439 5.6 - Term 1383 - 1443 15.7 4 4 Tu 1 . - CDS 1450 - 3612 2983 ## COG2217 Cation transport ATPase - Prom 3701 - 3760 5.6 - Term 3764 - 3826 12.4 5 5 Tu 1 . - CDS 3849 - 4796 959 ## COG0385 Predicted Na+-dependent transporter - Prom 4825 - 4884 3.9 + Prom 4918 - 4977 4.4 6 6 Op 1 10/0.000 + CDS 5042 - 5419 601 ## PROTEIN SUPPORTED gi|241760375|ref|ZP_04758470.1| ribosomal protein S6 7 6 Op 2 10/0.000 + CDS 5422 - 5718 191 ## COG2965 Primosomal replication protein N 8 6 Op 3 27/0.000 + CDS 5725 - 5955 388 ## PROTEIN SUPPORTED gi|225075138|ref|ZP_03718337.1| hypothetical protein NEIFLAOT_00138 9 6 Op 4 . + CDS 5972 - 6427 691 ## PROTEIN SUPPORTED gi|59801015|ref|YP_207727.1| 50S ribosomal protein L9 + Term 6476 - 6511 1.5 + Prom 6618 - 6677 5.9 10 7 Tu 1 . + CDS 6704 - 7786 1331 ## COG2951 Membrane-bound lytic murein transglycosylase B + Term 7808 - 7836 1.0 + Prom 7822 - 7881 3.4 11 8 Op 1 30/0.000 + CDS 7950 - 10049 2030 ## COG2812 DNA polymerase III, gamma/tau subunits 12 8 Op 2 . + CDS 10181 - 10516 178 ## PROTEIN SUPPORTED gi|149916415|ref|ZP_01904934.1| 30S ribosomal protein S21 + Term 10538 - 10579 10.0 + Prom 11007 - 11066 1.9 13 9 Tu 1 . + CDS 11212 - 13122 3073 ## COG0366 Glycosidases + Prom 13227 - 13286 3.8 14 10 Op 1 . + CDS 13348 - 17493 3973 ## COG3209 Rhs family protein 15 10 Op 2 . + CDS 17505 - 17747 136 ## NT05HA_0260 protein SGE1 + Term 17776 - 17811 -0.5 + Prom 17768 - 17827 2.0 16 11 Op 1 . + CDS 17977 - 18489 255 ## gi|298368610|ref|ZP_06979928.1| pentapeptide repeat family protein 17 11 Op 2 . + CDS 18516 - 18986 183 ## gi|298368611|ref|ZP_06979929.1| hypothetical protein HMPREF9016_00277 + Prom 19005 - 19064 2.1 18 12 Op 1 . + CDS 19173 - 19676 0 ## gi|261381439|ref|ZP_05986012.1| RHS family protein 19 12 Op 2 . + CDS 19688 - 20182 123 ## gi|298368612|ref|ZP_06979930.1| conserved hypothetical protein 20 12 Op 3 . + CDS 20205 - 20369 56 ## + Term 20452 - 20505 14.0 21 13 Op 1 4/0.100 + CDS 20532 - 21902 1729 ## COG0160 4-aminobutyrate aminotransferase and related aminotransferases 22 13 Op 2 . + CDS 21906 - 23438 1793 ## COG0076 Glutamate decarboxylase and related PLP-dependent proteins + Term 23448 - 23508 10.7 - Term 23441 - 23489 8.9 23 14 Tu 1 . - CDS 23584 - 24021 559 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - Prom 24149 - 24208 2.7 + Prom 24113 - 24172 5.0 24 15 Tu 1 . + CDS 24229 - 24624 468 ## gi|298368616|ref|ZP_06979934.1| hypothetical protein HMPREF9016_00282 + Term 24664 - 24703 6.9 - Term 24643 - 24699 14.2 25 16 Op 1 . - CDS 24738 - 26303 2496 ## COG0519 GMP synthase, PP-ATPase domain/subunit - Term 26335 - 26388 14.2 26 16 Op 2 . - CDS 26407 - 26757 507 ## gi|298368618|ref|ZP_06979936.1| conserved hypothetical protein - Prom 26785 - 26844 1.8 27 17 Op 1 . - CDS 26902 - 27354 674 ## gi|298368619|ref|ZP_06979937.1| conserved hypothetical protein 28 17 Op 2 . - CDS 27423 - 27869 757 ## COG0691 tmRNA-binding protein 29 17 Op 3 . - CDS 27927 - 28148 364 ## COG4728 Uncharacterized protein conserved in bacteria - Prom 28292 - 28351 5.7 - Term 28299 - 28334 4.5 30 18 Tu 1 . - CDS 28362 - 28565 395 ## COG1278 Cold shock proteins - Prom 28586 - 28645 6.3 + Prom 28660 - 28719 5.7 31 19 Op 1 19/0.000 + CDS 28836 - 29153 417 ## COG2127 Uncharacterized conserved protein 32 19 Op 2 . + CDS 29158 - 31440 1349 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 + Term 31446 - 31499 12.4 - Term 31434 - 31487 13.2 33 20 Tu 1 . - CDS 31508 - 31858 598 ## D11S_1226 hypothetical protein - Prom 31901 - 31960 1.6 34 21 Op 1 . + CDS 32020 - 32613 584 ## COG0500 SAM-dependent methyltransferases 35 21 Op 2 . + CDS 32682 - 34400 2692 ## COG0018 Arginyl-tRNA synthetase + Term 34419 - 34460 11.3 + Prom 34805 - 34864 6.9 36 22 Op 1 . + CDS 34887 - 35558 668 ## COG0274 Deoxyribose-phosphate aldolase 37 22 Op 2 . + CDS 35548 - 36354 962 ## COG0738 Fucose permease 38 22 Op 3 . + CDS 36394 - 36672 259 ## COG0738 Fucose permease 39 22 Op 4 . + CDS 36585 - 36839 280 ## COG0738 Fucose permease 40 22 Op 5 . + CDS 36929 - 37948 1497 ## Arch_1730 hypothetical protein 41 22 Op 6 . + CDS 38094 - 39023 1564 ## COG0524 Sugar kinases, ribokinase family + Term 39039 - 39078 10.0 - Term 39021 - 39073 13.3 42 23 Tu 1 . - CDS 39085 - 40287 1978 ## COG0814 Amino acid permeases - Prom 40438 - 40497 1.9 - Term 40446 - 40505 16.1 43 24 Op 1 12/0.000 - CDS 40513 - 41949 1803 ## COG1012 NAD-dependent aldehyde dehydrogenases 44 24 Op 2 . - CDS 42026 - 43285 1487 ## COG0160 4-aminobutyrate aminotransferase and related aminotransferases - Prom 43367 - 43426 5.3 + Prom 43291 - 43350 6.0 45 25 Tu 1 . + CDS 43416 - 44174 707 ## COG1414 Transcriptional regulator + Term 44178 - 44229 0.9 - Term 44420 - 44461 11.3 46 26 Op 1 . - CDS 44493 - 44849 633 ## CV_1536 hypothetical protein 47 26 Op 2 . - CDS 44861 - 45754 1265 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 48 27 Tu 1 . - CDS 45883 - 46578 754 ## ABAYE3045 hypothetical protein - Prom 46600 - 46659 6.2 49 28 Tu 1 . - CDS 46768 - 48384 2262 ## COG0665 Glycine/D-amino acid oxidases (deaminating) - Prom 48409 - 48468 4.5 + Prom 48487 - 48546 3.8 50 29 Op 1 1/0.200 + CDS 48580 - 49200 890 ## COG0135 Phosphoribosylanthranilate isomerase 51 29 Op 2 . + CDS 49249 - 50151 900 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 52 29 Op 3 2/0.200 + CDS 50205 - 50810 612 ## COG3663 G:T/U mismatch-specific DNA glycosylase 53 29 Op 4 . + CDS 50887 - 52089 1907 ## COG0133 Tryptophan synthase beta chain + Prom 52104 - 52163 1.9 54 30 Tu 1 . + CDS 52190 - 52711 510 ## COG3161 4-hydroxybenzoate synthetase (chorismate lyase) + Prom 52807 - 52866 3.9 55 31 Op 1 . + CDS 52903 - 53103 292 ## NMO_0909 hypothetical protein 56 31 Op 2 . + CDS 53164 - 53859 912 ## COG0846 NAD-dependent protein deacetylases, SIR2 family + Term 53869 - 53918 17.3 + Prom 53900 - 53959 6.7 57 32 Tu 1 . + CDS 54061 - 55113 1562 ## COG0502 Biotin synthase and related enzymes + Term 55137 - 55175 10.2 - Term 55117 - 55168 14.1 58 33 Tu 1 . - CDS 55175 - 55834 1161 ## COG0692 Uracil DNA glycosylase - Prom 55859 - 55918 6.8 - Term 55900 - 55943 11.1 59 34 Tu 1 . - CDS 55953 - 56963 1854 ## COG0180 Tryptophanyl-tRNA synthetase - Prom 56995 - 57054 5.7 + Prom 57603 - 57662 5.3 60 35 Tu 1 . + CDS 57737 - 60310 1676 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 + Term 60334 - 60384 13.1 + Prom 60505 - 60564 4.2 61 36 Tu 1 . + CDS 60591 - 62363 270 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 62 37 Tu 1 . + CDS 62495 - 63202 1114 ## COG4122 Predicted O-methyltransferase 63 38 Op 1 . + CDS 63347 - 64000 981 ## COG0500 SAM-dependent methyltransferases 64 38 Op 2 . + CDS 64152 - 65915 232 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P + Term 65939 - 65991 20.5 + Prom 65943 - 66002 3.5 65 39 Tu 1 . + CDS 66035 - 66970 1151 ## COG0167 Dihydroorotate dehydrogenase + Term 67014 - 67058 6.8 - Term 66996 - 67052 8.8 66 40 Tu 1 . - CDS 67070 - 67435 485 ## COG0789 Predicted transcriptional regulators - Prom 67527 - 67586 4.7 + Prom 67415 - 67474 4.9 67 41 Op 1 . + CDS 67564 - 68229 815 ## COG3545 Predicted esterase of the alpha/beta hydrolase fold + Term 68235 - 68274 10.0 + Prom 68337 - 68396 3.2 68 41 Op 2 . + CDS 68425 - 69762 1867 ## COG0477 Permeases of the major facilitator superfamily + Term 69771 - 69829 14.0 - Term 69766 - 69805 9.1 69 42 Op 1 . - CDS 69815 - 70339 325 ## gi|298368659|ref|ZP_06979977.1| hypothetical protein HMPREF9016_00326 70 42 Op 2 . - CDS 70348 - 71643 1360 ## XCV3566 hypothetical protein 71 42 Op 3 . - CDS 71640 - 72296 417 ## XAC3174 hypothetical protein - Term 72311 - 72352 11.3 72 43 Op 1 . - CDS 72353 - 72469 123 ## 73 43 Op 2 . - CDS 72472 - 73125 538 ## XAC3174 hypothetical protein - Term 73141 - 73182 9.6 74 44 Op 1 . - CDS 73183 - 73299 80 ## 75 44 Op 2 . - CDS 73296 - 73478 128 ## gi|298370645|ref|ZP_06981954.1| secreted protein - Prom 73500 - 73559 2.0 Predicted protein(s) >gi|289656364|gb|ADEA01000003.1| GENE 1 31 - 279 492 82 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298368596|ref|ZP_06979914.1| ## NR: gi|298368596|ref|ZP_06979914.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 82 1 82 82 98 100.0 1e-19 MSGKLDQISGKVKETAGEVFDDSKLKAEGVIQQGIGKIKEAAADIEEKAGDVLKKGKEEA GHLVDEAKEKAENLINDIKSKF >gi|289656364|gb|ADEA01000003.1| GENE 2 395 - 958 873 187 aa, chain - ## HITS:1 COG:no KEGG:Psta_2515 NR:ns ## KEGG: Psta_2515 # Name: not_defined # Def: lipolytic protein G-D-S-L family # Organism: P.staleyi # Pathway: Biosynthesis of unsaturated fatty acids [PATH:psl01040] # 3 187 54 233 245 85 30.0 1e-15 MTVYLIGDSVRLASEPYTRAALPDAGIVSPSENCRSSHDVLQHIKQWTAGAAAGDIVHIN CGLHDIRRDRGSNGPVADLETYRSNLTRIFDYLKKTGAKIIWADSTPFLESVHNIVKSSR RYLADLKAYNRVADDLAKQYGFAINDLYSLMFRQDLTALMLCDGLHFNEFGSEMIGKAVA EAVSKQM >gi|289656364|gb|ADEA01000003.1| GENE 3 1088 - 1345 419 85 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298368598|ref|ZP_06979916.1| ## NR: gi|298368598|ref|ZP_06979916.1| hypothetical protein HMPREF9016_00264 [Neisseria sp. oral taxon 014 str. F0314] # 1 85 1 85 85 157 100.0 2e-37 MDMMTFTNILLIVLCIFTMLLVWSRNWKRKQAYFEKIKSNPENLKWVGQNLTGQEWKDLK TVGDRFGLPMLQAKQLIDFYKNSRN >gi|289656364|gb|ADEA01000003.1| GENE 4 1450 - 3612 2983 720 aa, chain - ## HITS:1 COG:NMB1325 KEGG:ns NR:ns ## COG: NMB1325 COG2217 # Protein_GI_number: 15677191 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Neisseria meningitidis MC58 # 1 720 1 720 720 1234 94.0 0 MQQKVRFQIEGMTCQACASRIEKVLNKKDFVESAGVNFASEEAQVVFDDSQTSADDIAKI IEKTGYGAKEKTEDALPQPEETAHVSWRLWLLLAINIPFLIGMAGMMIGRHDWMIPPLWQ FVLASVVQLWLAVPFYKSAWASIKGGLANMDVLVTIGTVSIYLYSVYMLFFSPHAAYGMA HVYFEAGVMVIGFVSLGKFLEHRTKKSSLNSLGLLLKLTPTQVNVQCEGEWKQLPIDQVQ IGDLIRANHGERIAADGIIESGSGWADESHLTGESNPEEKKAGGKVLAGALMTEGSVVYR ATQLGSQTLLGDMMNALSEAQGSKAPIARVADKAAAVFVPAVVGIALLTFIATWLLKGDW TVALMHAVAVLVIACPCALGLATPAAIMVGMGKAVKHGIWFKDAAAMEEAAHVDAVVLDK TGTLTEGRPQVAAVYCVPDSGFDEDALCRIAAAVEQNAAHPLARAIVSAAQARGLDIPAT QNAQTVVGAGIAAEVEGAGLVKAGKAEFAELTLPEFSDDVWSIASIVAVSANGKPIGAFA LADALKADTAEAIGRLKKHGIDVYIMSGDNQGTVEYVAKQLGIAHAFGNMSPRDKAAEVQ KLKAAGKTVAMVGDGINDAPALAAANVSFAMKGGADVAEHTASATLMQHSVNQLADALLV SQATLKNIKQNLFFAFFYNILGIPLAALGFLNPVIAGAAMAASSVSVLSNALRLKRVNIE >gi|289656364|gb|ADEA01000003.1| GENE 5 3849 - 4796 959 315 aa, chain - ## HITS:1 COG:NMA0909 KEGG:ns NR:ns ## COG: NMA0909 COG0385 # Protein_GI_number: 15793875 # Func_class: R General function prediction only # Function: Predicted Na+-dependent transporter # Organism: Neisseria meningitidis Z2491 # 1 309 1 311 315 362 72.0 1e-100 MNKLTRISNFIGKTFAFWAALCAAVAFYFPETFKWVTPHIPLFLGIIMFGMGLTLTPSDF KIIGRHPKAVVIGVVSQFVIMPLTAYSLAVGLNLPAEIAVGVILVGSCPGGTASNVITYL ARGNVALSVAVTSVTTLLAPIMTPFIFWALAHQWLEISAADMLVSIMKMVLLPIILGVIA HTLFRRQTEKAAGALPLVSVIAIVLIIGAVVGASKPKIIESGLLIFGVVVLHNCIGYLLG FLAAKLCKLPYDAQKTLAIEVGMQNSGLGAALASAYFTPLAAVPSALFSVWHNISGSLLA SYWASKAEKADPAER >gi|289656364|gb|ADEA01000003.1| GENE 6 5042 - 5419 601 125 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|241760375|ref|ZP_04758470.1| ribosomal protein S6 [Neisseria flavescens SK114] # 1 125 1 123 123 236 95 3e-61 MRHYEIVFIVHPDQSEQVPAMVERYKTMITEANGKIHRLEDWGRRQLAYPINKIHKAHYV LMNIETTPEVVEELETAFRFNDAVLRHLTIKTKHAVTEASPMLGGEKTKNLLNSAATAEE VAEAE >gi|289656364|gb|ADEA01000003.1| GENE 7 5422 - 5718 191 98 aa, chain + ## HITS:1 COG:NMB1322 KEGG:ns NR:ns ## COG: NMB1322 COG2965 # Protein_GI_number: 15677188 # Func_class: L Replication, recombination and repair # Function: Primosomal replication protein N # Organism: Neisseria meningitidis MC58 # 3 98 5 100 100 124 65.0 4e-29 MENLLRLTARIAECGALRYTPAGIPVLDLILVHESWQEENGQKCLVKFEMHARILGKEAE MWQYRQNIMVEAEGFLAQRSQRFPRPILRIQKIKEYKG >gi|289656364|gb|ADEA01000003.1| GENE 8 5725 - 5955 388 76 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225075138|ref|ZP_03718337.1| hypothetical protein NEIFLAOT_00138 [Neisseria flavescens NRL30031/H210] # 1 76 1 76 76 154 100 2e-36 MARQSFKRRKFCRFTAEKIQEVDYKQVDLLKDFISENGKIIPARITGTKAHYQRQLATAV KRARFLALLPYTDQHK >gi|289656364|gb|ADEA01000003.1| GENE 9 5972 - 6427 691 151 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|59801015|ref|YP_207727.1| 50S ribosomal protein L9 [Neisseria gonorrhoeae FA 1090] # 1 149 1 149 150 270 92 1e-71 MQIILLEKIGGLGNLGDIVTVKNGYARNFLIPSGKAKRATEANMQEFEARRAELEARQAE ILADAKARQEKLDGQTITIAQKAGVDGRLFGSVTNADIAAAVVASGIEAVKANVRLPNGP LKAVGEYELEVVLHTDAVAKITVAVVAAAVE >gi|289656364|gb|ADEA01000003.1| GENE 10 6704 - 7786 1331 360 aa, chain + ## HITS:1 COG:NMB1279 KEGG:ns NR:ns ## COG: NMB1279 COG2951 # Protein_GI_number: 15677146 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-bound lytic murein transglycosylase B # Organism: Neisseria meningitidis MC58 # 4 360 3 369 369 474 64.0 1e-133 MFVKKSLILLAVAAALAACSSNQTERPSVSGQEKGVQPLTKRPAFDAAAESVASSGFNAN TNVQAFIKYEAAKGRFKEADLRDFFDNAVYKGNIISIIYRPSTSRPWYEFRTGNSGESKF NGGRQFYAANRDIIDDVSRKYGVPPELIVAIIGIETNYGKNTGSFRVADALSTLAFDYPR RAEFFQDELSELFLMAKEEKTDIFSFKGSYAGAMGMPQFMPSSFRKWAVDYDGDGHRDIW NNIGDVAASVANYMKAHGWQTGGKMIVPVTLDPTPQIQAIIDEQTALTRTVADFRELGVV PMEGVADSEKAVLYRLEISPGVYEYYLGLNNFYAVWKYNHSRMYVTAVRDIANAVGPAGL >gi|289656364|gb|ADEA01000003.1| GENE 11 7950 - 10049 2030 699 aa, chain + ## HITS:1 COG:NMB1443 KEGG:ns NR:ns ## COG: NMB1443 COG2812 # Protein_GI_number: 15678010 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, gamma/tau subunits # Organism: Neisseria meningitidis MC58 # 1 698 1 703 704 756 63.0 0 MAYQVLARKWRPKTFADLVGQEHVVKALRNALDEGRLHHAYLLTGTRGVGKTTIARILAK SLNCGHAEHGEPCGVCESCTQIDAGRYVDLLEIDAASNTGIDNIREVLENAQYAPTAGRY KVYIIDEVHMLSKSAFNAMLKTLEEPPEHVKFILATTDPHKVPVTVLSRCLQFVLRNMTT QQVADHLAHVLESEKIPYEATALQLIGRAGAGSMRDALSLLDQAIAMGSGSVAEQDVRQM IGAVDKQYLYELLAGIVNQDGKALLGKAQEMAARAIGFDSALSELAMLLQRLALIQAVPS ALAGDDPERENLLNFVRALSGEQIQLYYQCVIHGKQDLSLAPDEYAGFVMTLLRMLAFAP FAAEAHGTDGVIENTQLGFASASEPTEKKPLRILPQETEAQTVRTASAGDGRPSENMAAK DEEIAESEVGLTDSGETSVESVPTPAEPETAASQLEHERPSETVAETAVAEAEAVPQPEQ PQTVQTETAATVRPSENIPAQSNEADNKQPLVKSADYAADEPPPYFPEEAGFIPETAAMS GMAGLDEEEDEADEDEQQFAALPEFKPENWAVVVQRFARKLGAAQMLAQHAAWAGYDADT HLLILALADEARATTNKERLDKIRDTLADAYGLPLKLQTEPWDDGKGLETPIMRRKRLQL EGRQQAQECLEADNEVQQIMQIFGAQWQQDTLELAENKE >gi|289656364|gb|ADEA01000003.1| GENE 12 10181 - 10516 178 111 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149916415|ref|ZP_01904934.1| 30S ribosomal protein S21 [Roseobacter sp. AzwK-3b] # 10 102 14 104 114 73 41 4e-12 MFGKAGLGGLMKQAQQMQENMKKAQAKLADTEVGGEAGNGLVKVTMTCAHVVRKLEISED LIKEAADDKEMLEDLVLAAINDASKKAEETANKTMGAFTQGLPAGMGDFFR >gi|289656364|gb|ADEA01000003.1| GENE 13 11212 - 13122 3073 636 aa, chain + ## HITS:1 COG:DR0933 KEGG:ns NR:ns ## COG: DR0933 COG0366 # Protein_GI_number: 15805957 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Deinococcus radiodurans # 26 633 7 640 644 451 42.0 1e-126 MLTQAQQIDLTLQHLKDYALSGYAQASRTRIKKTEDWKKFSERLDVHFPNLMHELDNVYG NNEAVLPMLEQLVTNAWKSYSQRGADLKATDLSREENPDWLLSNKMVGGVCYVDLFAGDL KGLKEKIPYFRELGLTYLHMMPLFKCPEGKSDGGYAVSSYREVNPALGTINDLREVISAL HEAGISAVVDFIFNHTSNEHEWAKGCVGGDPQYDNFYYIFPDRWMPDQYDRTLREIFPDQ HPGGFSQLEDGRWVWTTFNSFQWDLNYTNPWVFNAMAGEMMFLANLGVDILRMDAVAFIW KQMGTSCESLPQAHALIRAFNSVMRIAAPAVFFKSEAIVHPDEVVQYIHQNECQIGYNPL QMALLWNTLATREVNLLQQALTYRHNLPEHTGWVNYVRSHDDIGWTFADEDASQFGIQGY NHRQFLNRFFVNHFDGSFARGVPFQYNPNTGDCRVSGTAAALAGLAQNDPYAVDRIKLLY SVVLSTGGLPLIYLGDEVGTLNDDEWASDSNKSDDSRWAHRPHYNETLYGQRNDPSTNAG KIYQGLRHMIQIRQSNDKFDGGRLNTFNTNNAHVLGYTRNHALLVLANFSEDAQTVGALT LSAMPEEAFDLISGETVSLHEGVTLRPYQVLWLEIA >gi|289656364|gb|ADEA01000003.1| GENE 14 13348 - 17493 3973 1381 aa, chain + ## HITS:1 COG:STM0291 KEGG:ns NR:ns ## COG: STM0291 COG3209 # Protein_GI_number: 16763674 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Salmonella typhimurium LT2 # 138 1269 225 1282 1364 385 29.0 1e-106 MAANKIARKDSRFRVISILPDFCFVPGLAAPVPFPLFADLGGAVKVAKDVLINGRSAFVY NASKAPKTYGDEPGQRKGVISRTVGEAAWPMQHSASVKIRSHYIIRTGDMFHMNGNFNKP LKKNTCLSCKVALAAGRPVNPVLGLKFLEGETDFAFDGLMPLIWQRSYYSDQEGTGWLGQ GWSIPGSERIERTAEGLIYTDVQGWEFPLPEVEEDDEEPVLFESEQIWFSKNSDGHYLIV SLDGSLTLRFAPLSVSADDPSGESGRHYPLVAAEDANGNHRRILYHHRSGLPQYVIDGNG RVFYLRFANTADAASPQMRLVAVYLLAEGLPDFFGGTPRTGKALVRYEYSVGGDLIRVIG RDGGEVRRFGYRNHIMTEHTDAAGLASYYEYDRYDTGGRVIRNRTSLGEEWRFAYRDGYT EVTDVLGRTEQYHYDCHNELTARVFADGSRIKMERDHLGRLTAHTDALGRTTRFGYSSEG QLESIIRPDGSELNYDYDDGYRLSSRTDAEGNCHSYGYDERGNLISHTDPKRYITRYRYR ADGLPECIELPEGGSTEYRYDADCRLESITDCSGNQTRLSYTAEGWLSHFTDALGQRTEY HYDGNGRLSHIHHPDGGSEYYRYDSAGRLIGHTDAAGCSTTYEYRPDGQPLKRIDALGRS FNYRYDPAGRLTSLTNENGAAYRLRYDALDRLAAETGFDGNLTVYHYNAAGELSARDEYG NSITAHGLESLSDGLKDKPPLIRTEYRRDELGRLQYLCASRHEGGEVRRAYHYDGDGRLV RAAAPEHVNYFEYDCNGRLVGEHGRDHPDAAECREQALPELDWRSREHDHLLVLHTELVS HHYDGNGNRTTTDLPDGRRISRHYYGSGHQHGLMFGGETVSDCERDALHREIRRTQGRLT ARYRYDPAGRLKEQRAVLAHTAADGRKVSAHAVRRSYHYDKDGNLVRSDDQRSGSTQYRY DALGQTVSAAGRSYAYDPAHNIRDHIEADGAAAAAVAEIIGRPANDNRVRHHNGHSYYYD DFGNVIQKEKADGEVHNYHYDPLHQLVQADIFRPGREKESWTYQYDAVGRRIRKRRIDAE GGILGETRYLWSGSRLLQTIDGWQTHTYLYAGQDGYEPLAQVRNWTDAEHGSHESIHYFH CDQIGRPRELTDAEGRLLWYGEYDALGRLEREEDICGVSQPFRLQNQHYDEETGLHYNLL RYYDADMGRFLTQDPIGLSGGENAYTYAPNVQMWIDPLGLNPALALGGYELWMLLFGGAV VVAGQQATQSGGFTGSRSSAGGAAVSVSDVGKCNKPPEGKCPPCKTVSGKIIQPKTLGYR PLDIIPNNVKQHGVYGSHHNIFEANQMPYPKCDCFWAKQKYVLKPNQLKSNMVPVEPFVN N >gi|289656364|gb|ADEA01000003.1| GENE 15 17505 - 17747 136 80 aa, chain + ## HITS:1 COG:no KEGG:NT05HA_0260 NR:ns ## KEGG: NT05HA_0260 # Name: not_defined # Def: protein SGE1 # Organism: A.aphrophilus # Pathway: not_defined # 1 79 1 80 94 91 61.0 1e-17 MKYSNGKEIKLGDIVCWTGSYPIEKGIVICLIDKDLFLDGYDFTMLKGRGGGIMVLFDDM GLVQITRDDEPDIDLIERMI >gi|289656364|gb|ADEA01000003.1| GENE 16 17977 - 18489 255 170 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298368610|ref|ZP_06979928.1| ## NR: gi|298368610|ref|ZP_06979928.1| pentapeptide repeat family protein [Neisseria sp. oral taxon 014 str. F0314] # 1 170 1 170 170 281 100.0 1e-74 MEFDENLLLMPDMKLLFQLEKNPELVDISLSLENYNFHRLDLTNKSISNLKFYNCSLRGA FLSNSVFTDCIFNFCSLVTAPAENSKFIKCYFINSDLRFIQANYCNFVGSVFANCNLIGA DFSNSKFHNSNFEENLFSKIASYNEETQYIEAKFENVIFNGKIVDKFNDI >gi|289656364|gb|ADEA01000003.1| GENE 17 18516 - 18986 183 156 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298368611|ref|ZP_06979929.1| ## NR: gi|298368611|ref|ZP_06979929.1| hypothetical protein HMPREF9016_00277 [Neisseria sp. oral taxon 014 str. F0314] # 1 156 1 156 156 275 100.0 7e-73 MDNFLEIDYRPFPTKKEIFKHEYRNDPYTENEYMKEFQYYEETPIQNIKLDDSNYIPLTM FLPEGINYLLPIIIKDIQKGAVDGNIPIILEEFIVGLSIDRNLHKMFKFIKKSELLVLKK VLENILFGSCNYIIESVGEVYFFRSLEYLENLLMKS >gi|289656364|gb|ADEA01000003.1| GENE 18 19173 - 19676 0 167 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261381439|ref|ZP_05986012.1| ## NR: gi|261381439|ref|ZP_05986012.1| RHS family protein [Neisseria subflava NJ9703] # 2 164 336 499 501 170 53.0 3e-41 MWIDPLGLFGLAGSLAGGGGFGAGAGAISATDGVSSVHQAAAAAIAVSRSKSEARTAVGR CEKEEQDPCSQFPTRKAAQNQVLIAAGIPVGTKPIARRGIQGWEQYLYARPAGAPLVVSH HPRDADHPCPHWHVGQAKMAGKDVATFNNGAWKYNNAGKITVPHSFN >gi|289656364|gb|ADEA01000003.1| GENE 19 19688 - 20182 123 164 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298368612|ref|ZP_06979930.1| ## NR: gi|298368612|ref|ZP_06979930.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 164 1 164 164 264 100.0 1e-69 MYFYIDKEQCKLEQREILEFWKNNKYFSNALELTEKVFLGDEAFNIYENFSDREDIYNIE KSDNYKNDILKFLNNYFDINEIVYILFAGNYPEKYRFGLSEQSYPIFEIEYKHISLWIDL IEDDNFQTIFISDLKFNKVIEISNIIDCNQSFETYTVSVKLSKL >gi|289656364|gb|ADEA01000003.1| GENE 20 20205 - 20369 56 54 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKFEIGTQEPKKWKGEKIMIFNNGEWKYKKQSKNTKNTFLFYKTVYHCPCPQVV >gi|289656364|gb|ADEA01000003.1| GENE 21 20532 - 21902 1729 456 aa, chain + ## HITS:1 COG:HI0949 KEGG:ns NR:ns ## COG: HI0949 COG0160 # Protein_GI_number: 16272887 # Func_class: E Amino acid transport and metabolism # Function: 4-aminobutyrate aminotransferase and related aminotransferases # Organism: Haemophilus influenzae # 5 455 6 453 454 714 76.0 0 MSGIPVNPIPQATNEHYLTRQDEMESNVRSYPRKLPLAIAKAQGCWVTDVEGNEYLDCLA GAGTLALGHNHPAIIKSIQNTLASGLPLHTLDITTPLKDAFSEALLAHFPGGKDEYRLQF CGPTGADATEAAVKLAKTFTGRGNVISFSGGYHGMTQGSLALTGNLGAKNAVPNLMPGVQ FLPYPHEYRCPLGLGGEAGVDALTYYFENFIEDVESGVVKPAAVILEAIQGEGGVVVGPT KWLRKIREVTEKHGILMIADEVQAGFCRSGKMFAFQHAGIEPDIVVMSKAVGGSLPLAVL AIKKKFDAWQPAGHTGTFRGNQLAMATGYASLRIMSEQDLAGNAQARGDFIRSELNRLAQ EFPCIGNVRGRGLMIGIEIVDERRPADRMGSLPADAVLAAEIQKACFNNKLLLERGGRNG TVVRLLAPLIITQQECEELIKRFRQSVADALESVRG >gi|289656364|gb|ADEA01000003.1| GENE 22 21906 - 23438 1793 510 aa, chain + ## HITS:1 COG:HI0946.1 KEGG:ns NR:ns ## COG: HI0946.1 COG0076 # Protein_GI_number: 16272884 # Func_class: E Amino acid transport and metabolism # Function: Glutamate decarboxylase and related PLP-dependent proteins # Organism: Haemophilus influenzae # 1 510 1 511 511 757 70.0 0 MVDFAEHKRALLCNDPQSAADYRDAMAEAVEAVAAWLQSDKMYTGGSIRELRSGIRFQPS SDGLGMRPALQRLIGLFLEKSLKVHHPHSLAHLHCPTLVASQVAEVLINAANQSMDSWDQ SPAGSLMEVQMIGWLRGKAGYGAGSAGVFTSGGTQSNLMGVLLARDACIAKHWKNSDGLP WSVQRDGLPADALQKVKVVCSENAHFSVQKNMAMMGMGFQSVVTVPADRNARMDVGALRR TLADLQAQGKIVACIVATAGTTDAGAIDPLPEIRTAADTCGAWMHLDAAWGGALLLSNEF RHMIDGIELTDSVTLDFHKHFFQSISCGAFLLKNEADYRFMHYEAEYLNSAYDEEHGVPN LVSKSLQTTRRFDALKLWFTIEALGEKRYGSMIDHGIRLARQTAGYIQAAEGLELLVEPQ FASVLFRVKPQGYPDKFVDSLNQNVADELFARGEANIGVTKVNGVQSLKMTLLSPVATFE DVQNLLSLVLAEAERIKDDIAAGVYVPPVD >gi|289656364|gb|ADEA01000003.1| GENE 23 23584 - 24021 559 145 aa, chain - ## HITS:1 COG:ECs4811 KEGG:ns NR:ns ## COG: ECs4811 COG0454 # Protein_GI_number: 15834065 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Escherichia coli O157:H7 # 6 143 177 313 329 63 27.0 1e-10 MTPKTLQAFLHRHIPATAALGLEVVASDEEKTVLSAPHAPNRNHKNTVFGGSIALVATTC GWAAVHTHFPEADGNIVIQQGETRYLRPARNGLNAVTRSGSVEDWQEMRNMFARRGKGKI VLKTEVFSEGELAAVFTGTFVALKN >gi|289656364|gb|ADEA01000003.1| GENE 24 24229 - 24624 468 131 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298368616|ref|ZP_06979934.1| ## NR: gi|298368616|ref|ZP_06979934.1| hypothetical protein HMPREF9016_00282 [Neisseria sp. oral taxon 014 str. F0314] # 1 131 13 143 143 216 100.0 4e-55 MRKLFGIFILSVACCMIAGADMLLFAKTETYQLMFFGGYAVSALLLVLLGLLCARDRRLY SLGMTLLGASLVMWSSVAAAAFVYSSHKWHARMPFDLLEVFGNRQAGFVVLVFQTLLSIW LVWQFRKPEEA >gi|289656364|gb|ADEA01000003.1| GENE 25 24738 - 26303 2496 521 aa, chain - ## HITS:1 COG:NMA0534_2 KEGG:ns NR:ns ## COG: NMA0534_2 COG0519 # Protein_GI_number: 15793529 # Func_class: F Nucleotide transport and metabolism # Function: GMP synthase, PP-ATPase domain/subunit # Organism: Neisseria meningitidis Z2491 # 198 521 1 324 324 662 99.0 0 MTQDKILILDFGSQVTQLIARRVREAHVYCELHSFDMPLDEIKAFNPKGIILSGGPNSVY ESDYQADTGIFDLGIPVLGICYGMQFMAHHLGGEVQPGNQREFGYAQVKTIDSELTRDIY DDAPNTLDVWMSHGDKVSKLPNGFAVIGDTPSCPIAMMENVEKQFYGIQFHPEVTHTKQG RALLNRFVLDICGAQPSWTMPNYIEEAVAKIREQVGSDEVILGLSGGVDSSVAAALIHRA IGDQLTCVFVDHGLLRLNEGKMVMDMFARNLGVKVIHVDAEEQFMAKLAGVTDPEKKRRI IGAEFIEVFDAEEKKLTNAKWLAQGTIYPDVIESAGAKTKKAHAIKSHHNVGGLPENMKL QLLEPLRDLFKDEVRELGVALGLPREMVYRHPFPGPGLGVRILGEVKKEYADLLRQADDI FIQELRNTTDENGTSWYDLTSQAFAVFLPVKSVGVMGDGRTYDYVVALRAVITSDFMTAH WAELPYSLLGRVSNRIINEVKGINRVVYDVSGKPPATIEWE >gi|289656364|gb|ADEA01000003.1| GENE 26 26407 - 26757 507 116 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298368618|ref|ZP_06979936.1| ## NR: gi|298368618|ref|ZP_06979936.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 116 1 116 116 199 100.0 3e-50 MPQASLSLPLFLILFGAIWFLKSTDILPATSTLIAIGLAVVGIIVMVFDGINKQSVVSGP MLIYAGAAVYLHTQYWVGFSPLVALGMMVLGCMLLLSRSSIVPYKQNKQVKTDDGK >gi|289656364|gb|ADEA01000003.1| GENE 27 26902 - 27354 674 150 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298368619|ref|ZP_06979937.1| ## NR: gi|298368619|ref|ZP_06979937.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 150 1 150 150 280 100.0 2e-74 MKQKYILAAAASVMLLNACGTSSKIKLVKPEEAANIRHVCIIKNPKVTRQADLDKLFAAA LEKQGISSEILSPDQRQRLYGPECRYNLRYFRVAGNAETIRKADVILRTPDYVVSSLGYS SDDEKSYRTSPDLQRQVDGIVARLLGKKAE >gi|289656364|gb|ADEA01000003.1| GENE 28 27423 - 27869 757 148 aa, chain - ## HITS:1 COG:NMA1726 KEGG:ns NR:ns ## COG: NMA1726 COG0691 # Protein_GI_number: 15794619 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: tmRNA-binding protein # Organism: Neisseria meningitidis Z2491 # 1 148 3 150 150 257 87.0 5e-69 MSIANNKKAFHDFFIEDQLEAGLVLEGWEVKAVRAGRVQLKESYIHWKKDAFYLVGCHIT ALPTASTHVKPDPVRQRKLLLNRSEINKLIGKTERAGYTVVPLNLHYNRGKIKMDIGLAK GKKQHDKRQSLKEADWKREKQRLMKQTR >gi|289656364|gb|ADEA01000003.1| GENE 29 27927 - 28148 364 73 aa, chain - ## HITS:1 COG:PA3012 KEGG:ns NR:ns ## COG: PA3012 COG4728 # Protein_GI_number: 15598208 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 5 71 40 106 124 94 59.0 6e-20 MKTTIKPGIYRHFKGGLYEVVGTAKHSETEEELIVYRALYGDYGLWARPAAMFTETVEID GEPLPRFSLINAF >gi|289656364|gb|ADEA01000003.1| GENE 30 28362 - 28565 395 67 aa, chain - ## HITS:1 COG:NMB0838 KEGG:ns NR:ns ## COG: NMB0838 COG1278 # Protein_GI_number: 15676734 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Neisseria meningitidis MC58 # 1 67 1 67 67 120 100.0 5e-28 MATGIVKWFNDAKGFGFITPDEGGEDLFAHFSAINMEGFKTLKEGQRVSFDVTTGPKGKQ AANIQAA >gi|289656364|gb|ADEA01000003.1| GENE 31 28836 - 29153 417 105 aa, chain + ## HITS:1 COG:NMA1046 KEGG:ns NR:ns ## COG: NMA1046 COG2127 # Protein_GI_number: 15793997 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 1 105 1 103 103 166 80.0 1e-41 MNRPNTSHESDTLLNENDRKTAPPKRYGVFLLNDDYTTMDFVVEVLSEVFMLGEEQAVAV MLLVHHEGKGLCGTYTRDIAQTKQLQVMQRAKAAGHPLQCTVEEI >gi|289656364|gb|ADEA01000003.1| GENE 32 29158 - 31440 1349 760 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 7 751 11 815 815 524 38 1e-148 MISAELEKIFQLLYSRARSQHYEFISLEHLLLVMIEKDDDVRSVLENCHADLKLLSRQLE ESIAENTPKIPDHLLDTAETQPTLGFQRVIQRAMVHTQSAGKSAVAPLDVLVALMGETDS HAVYFLKLQSVTRYEILRCIAHGAGFSEQSDSDGPNQDDEGNIENKGDALADYTVNLNAE VKAGRIDPLIGRKHEMERLVQILCRRRKNNPLLVGEAGVGKTALAEGLAHQIVNGDIPDA LKDAEVYALDMGSLLAGTKYRGDFEARVKSVLKQLEKIPQAILFIDEIHTIIGAGSTSGG TMDASNLLKPALAKGSLRCIGATTYDEYRTIFDKDHALSRRFQKIDVVEPTVAETVQILR GLKPMFEGFHQVRYTQGALEAAAELSARYINERFLPDKAIDVMDEAGAAQRILPKSKQKK VIGKAQIETVIAKVARIPEKTVSHDDKQVLQFLGRDLKNMVYGQENAIDALVAAVKMSRS GLALPDKPIGCFLFSGPTGVGKTEVAKQLAYSMGVPLQRFDMSEYMERHAVSRLIGAPPG YVGFEQGGLLTEAVNKQPHCVLLLDEIEKAHPDIFNVLLQVMDAGKLTDNNGKSADFRNV ILIMTTNAGAESLSRPSLGFTAKRERGDEMQAINKLFTPEFRNRLDAIIPFAPLSEPVIA KVVDKFLLQLEHQLLDKKVEAEFTPALRKYLAEKGFDPQMGARPMHRLIQEKIRKPLADE LLFGKLADGGYVRIDWDAAKEEAVLKFKKNAGWKQTETAV >gi|289656364|gb|ADEA01000003.1| GENE 33 31508 - 31858 598 116 aa, chain - ## HITS:1 COG:no KEGG:D11S_1226 NR:ns ## KEGG: D11S_1226 # Name: not_defined # Def: hypothetical protein # Organism: A.actinomycetemcomitans # Pathway: not_defined # 25 115 22 111 120 65 40.0 5e-10 MNPTRSALCLMLTALFASPVFATPVGKVSGKNGKIFSGENDTVVKKDMKKGETIKPHAHE NFRTVLFAVGKGRFDATLNTDEKHPVGAGEVLKFGGRDVIEAVARENSSVTITLVK >gi|289656364|gb|ADEA01000003.1| GENE 34 32020 - 32613 584 197 aa, chain + ## HITS:1 COG:slr1183 KEGG:ns NR:ns ## COG: slr1183 COG0500 # Protein_GI_number: 16332291 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Synechocystis # 4 172 2 170 194 111 35.0 7e-25 MNKWDQRYAAEEFIFGTEPHDFVRRVRPYLPAAGRALDLATGEGRNGVFLAQCGLSAEGV DSSPVAVAKAEKMAALKGVDFAVRVADITAMRMPPGHYAVISSVCCHFAEPVRSRLARGI VDALVSDGLFIGVFYHPEQAALEKGPKDRTVLADMAELQTAFGGLEWLIAEHCRTGEGGE ARSTVCLLGRKTLSDGI >gi|289656364|gb|ADEA01000003.1| GENE 35 32682 - 34400 2692 572 aa, chain + ## HITS:1 COG:NMB1506 KEGG:ns NR:ns ## COG: NMB1506 COG0018 # Protein_GI_number: 15677359 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Arginyl-tRNA synthetase # Organism: Neisseria meningitidis MC58 # 1 572 1 572 572 1064 97.0 0 MNLHQTVECEAAAAFAAAGIADSPVVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQK VAEALAGNAVIESTEVAGPGFINLRLRPEFLAQNIHAALNDARFGIAKTDKPQTVVIDYS SPNLAKEMHVGHLRSSIIGDSISRVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDN AAFELADLEQFYRAAKVRFDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQA VYDTLGLKLRSEDVAGESKYNDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAA FIVQKQGGGFLYASTDLACLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPEN AKAEFIGFGTMMGKDGKPFKTRSGDTVKLVDLLTEAVERATALVTEKNPELGADEAAKIG KTVGIGAVKYADLSKNRTSDYVFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKAGEWDAAA PTVLTEPLEKQLATELLKFEDVLQSVADTAYPHYLAAYLYQTATLFSRFYEACPILKAEG ATRNSRLQLAKLTGDTLKQGLDLLGIDVLDVM >gi|289656364|gb|ADEA01000003.1| GENE 36 34887 - 35558 668 223 aa, chain + ## HITS:1 COG:lin2103 KEGG:ns NR:ns ## COG: lin2103 COG0274 # Protein_GI_number: 16801169 # Func_class: F Nucleotide transport and metabolism # Function: Deoxyribose-phosphate aldolase # Organism: Listeria innocua # 1 213 1 213 223 225 61.0 6e-59 MNQSKLIDHTLLAAQATQAQVARLCGEAAEYGFCSVCVNPARVAFAKARLAGTDVKVCTV IGFPLGAATSSAKAFETKDAIANGADEVDMVMNIGLAKDGDWTGVEADIRAVVAAADGKA LVKVILEICLLTEEEIRKACACALAAGADFVKTSTGFSTGGATVEAVRLMRECVGNKMGV KASGGVRTARDMAAMVAAGGSRIGASAGVALLNDSSGEMNHDY >gi|289656364|gb|ADEA01000003.1| GENE 37 35548 - 36354 962 268 aa, chain + ## HITS:1 COG:STM3792 KEGG:ns NR:ns ## COG: STM3792 COG0738 # Protein_GI_number: 16767076 # Func_class: G Carbohydrate transport and metabolism # Function: Fucose permease # Organism: Salmonella typhimurium LT2 # 9 268 8 266 438 313 64.0 3e-85 MIIKTSARQLSDGYLDRTPWFQYVLLSICFPMWGMAASLNDILITQFKSIFTLSDFASAF VQSAFYGGYFLIAIPASRVIRRWSYKVGILIGLVCYIGGCTLFFPASHMATYGVFLMALF AIAVGLSFLETSCNTYSSMIWPKESSTLRLNISQTFTPVGFLSGILLGKYLIFTEGEALH RQMETLDGAGKQQLAAEMLQRTLQPYQFIIMVLVVLLVIVAITQFPRCKPLDKEAHETKA TIGETLRYLACNSRFRFGIMAQFFYVGM >gi|289656364|gb|ADEA01000003.1| GENE 38 36394 - 36672 259 92 aa, chain + ## HITS:1 COG:STM3792 KEGG:ns NR:ns ## COG: STM3792 COG0738 # Protein_GI_number: 16767076 # Func_class: G Carbohydrate transport and metabolism # Function: Fucose permease # Organism: Salmonella typhimurium LT2 # 5 86 284 365 438 91 56.0 3e-19 MDAGLNERAAANYVIYAFVGFFLGKCLANILMKRFNENKVLIAYSVLGSLALVYVIGVHD MSAIWAAIFVSTMFGPCWATIYARSLLKPAAP >gi|289656364|gb|ADEA01000003.1| GENE 39 36585 - 36839 280 84 aa, chain + ## HITS:1 COG:STM3792 KEGG:ns NR:ns ## COG: STM3792 COG0738 # Protein_GI_number: 16767076 # Func_class: G Carbohydrate transport and metabolism # Function: Fucose permease # Organism: Salmonella typhimurium LT2 # 23 78 373 428 438 73 60.0 1e-13 MGGHFRVDDVRPLLGNHLRAFATETGGAVIVMSIIGGAVVPVIQGLVSDMLGSMQLAFSV SLVCFVVVLLYFWNEHRLETAESR >gi|289656364|gb|ADEA01000003.1| GENE 40 36929 - 37948 1497 339 aa, chain + ## HITS:1 COG:no KEGG:Arch_1730 NR:ns ## KEGG: Arch_1730 # Name: not_defined # Def: hypothetical protein # Organism: A.haemolyticum # Pathway: not_defined # 1 339 1 339 339 435 62.0 1e-120 MYRIPLSESLFGKEPQVVLQSDEFTVTAFAYPQNIAALKIANSRGFVEVLPLMGQIIWDA VFDGKSLRMDNMFRKPQRGSEIVDTYGCFAFHSGLLTGGCPSPEDTHPLHGEFPCAPMDK AWLEVDENSVRVVSEYEYVRGFGHHYLASPSVTLTAGSPRFDIGMRVENLSAYQPMPLLY MCHMNYAYAEQGQMRQNLPDSAFQLRRTVPLHVHPTPQWQEFNRAILNGEVDGSVLDRPD CYDPEIVYFADNLAQYGDHLEFEIYHPVTQTTFSTRFSSQEFPHATRWILNNPDQKVAAF VLPATARPEGYLAAEKAGTLQWLQPGEAKSFTVNTGIKD >gi|289656364|gb|ADEA01000003.1| GENE 41 38094 - 39023 1564 309 aa, chain + ## HITS:1 COG:STM3793 KEGG:ns NR:ns ## COG: STM3793 COG0524 # Protein_GI_number: 16767077 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Salmonella typhimurium LT2 # 1 292 1 292 306 367 63.0 1e-101 MDIAVIGSNMVDLVTYINRMPVEGETVEAPDFKLGCGGKGANQAVAAAKLGSEVLMLTRV GNDIFAENTIENFRRHNIDTRYILKSDASSGVAPIFVDPESRNSIIIIKGANKLLTSADI DAAAEDIKKCKLIVLQLEIPTETVYAAVKFGEEHGIPVLFNPAPAQPDLVLDQVKSCEFI VPNETELSLLTGMPVDSEDDIRKAAVALHQAGVKNVIVTLGSKGVLWLDQDGKERMFPSF KVKARDTTGAGDAFIGCFSHVYVKTGDIAKAIETANRYAADSVTRLGTQTSYCDRSSFIA DHPEQAQNV >gi|289656364|gb|ADEA01000003.1| GENE 42 39085 - 40287 1978 400 aa, chain - ## HITS:1 COG:PA3766 KEGG:ns NR:ns ## COG: PA3766 COG0814 # Protein_GI_number: 15598961 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Pseudomonas aeruginosa # 2 400 20 418 418 464 61.0 1e-130 MSDVLRVEKITFWEGVAMIIGTNIGAGILGVSYAARQAGYMPLLFWLVVVGVITTVTMLY VAEATLRTRQHEQLSGLAQRYVGGFGSWLMFASVTVNALGALIAYMSGSGDLMHSLFGID KRIGSILFFIPAALILALGLKALGRSEKWITSLMVLMLLVLVGATLFFPTTDFRRLLDGS WLYMVPVFNLVVFIYCAQYIVPEIARGLSHTPKQLPKAIVTGMFCTFALIALVPLSVISL NGLDNVSQVATVNWGNALGSWAFFMANGFALFAMLTSYWGIGGSFLTNIADRFSLKVDDN LKVRSLTVVVVALPPLVLAYSGMVGFVDALYFAGVFSGVVLSIVPYLIIKGARDKGNRTP EWTCAPWMTHPAIYTLIFLLYSASAVYAVLAKLDLLPPGW >gi|289656364|gb|ADEA01000003.1| GENE 43 40513 - 41949 1803 478 aa, chain - ## HITS:1 COG:NMA1696 KEGG:ns NR:ns ## COG: NMA1696 COG1012 # Protein_GI_number: 15794589 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Neisseria meningitidis Z2491 # 1 477 1 477 477 835 91.0 0 MKTFSQLLNHPDISFSPISDGLKVSNPATGETLAFVRTTHSDDLKLLIQKAEAAQKLWAA KTALERADVLWRWYFLIKENKEELARIMTMEQGKSLNEALGEIDYAASFVRWFAEEARRI DGDVLTSVKASQKLVVLKQPVGVTAAITPWNFPSAMIARKAAPALAVGCAMIVKPASLTP LSAYALALLAYEAGVPHDLLPVVSGRASEISHEFATNPTVRKISFTGSTEVGAKIFADSA ADIKKLSLELGGNAPFIVFDDADLDKAVEGAIASKFRNSGQTCVCTNRVYAQSGIYDEFC RKLSEKVAALKLGNGLDEGVNQGPLIEEKAVEKVEQHIADALSKGAVCLTGGKRSALGGT FFEPTVLSGVTAQMAVAREETFGPLCPVFCFETEAEVIAAANDTEYGLAAYLFTSDTARQ WRVGEALEYGMVGINTGLISNEAAPFGGVKRSGLGREGSKYGADEYLELKYLCIDVAG >gi|289656364|gb|ADEA01000003.1| GENE 44 42026 - 43285 1487 419 aa, chain - ## HITS:1 COG:goaG KEGG:ns NR:ns ## COG: goaG COG0160 # Protein_GI_number: 16129263 # Func_class: E Amino acid transport and metabolism # Function: 4-aminobutyrate aminotransferase and related aminotransferases # Organism: Escherichia coli K12 # 2 413 4 419 421 480 59.0 1e-135 MNTWIKRMRDVLPTGAAVGCDWFAQSARNAVIKSTDGREIIDFVGGIGVLNVGHCHPKVT AAVAAQLEKFTHTAFQVVPYQNYVELGERLGKLVPIEGKVKCQFFCSGAEAVENAVKIAR AYTRRNGVIAFGGAFHGRTLMTLALTGKVSPYQADFGAMPSGVFHALFPSETQHISVEDA VKSIKRIFKSDIAPHDVAAIILEPVQGEGGFNVCPPEFMRAVREICDEHGIVMIADEVQS GYGRTGKLFAMEHYDVKPDLITMAKSLAGGMVLSGVAGKADIMNAARPGGLGGTYAGNPL GIAAALAVLDIIEEEKLLERSQYLGDKLKQFLRDLNAPEITQIRGLGSMVAVEFGDDDCP NSEFAAKVKSIAMENNLLLLTCGAHANAIRFLYPLTIEEELFDRALTILKNAFEKARQS >gi|289656364|gb|ADEA01000003.1| GENE 45 43416 - 44174 707 252 aa, chain + ## HITS:1 COG:AGpA196 KEGG:ns NR:ns ## COG: AGpA196 COG1414 # Protein_GI_number: 16119362 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 7 250 25 269 275 207 46.0 2e-53 MSEQKLTNPALEKIVRILDLLTKAARPLNGAQIAKQLDLPRSSVHGLLNGMLAYGLIRKS GDGGFTPGTHLMYWANGFLATQDIVADFQQAIAAMPALDAYTLTLSVLTGDQVMYLACRN STSPLGFIFRAGMRFPAVLTATGKAILATFSDEEVRQIVTAFPEPLTDTSVRTQDGLLEE LAQTRARGYAVDNGQLRLGMYCFGTALADMQGQRYGIAVSLTEKEADETTVRHVAGHLKQ LAEKLENGLGRG >gi|289656364|gb|ADEA01000003.1| GENE 46 44493 - 44849 633 118 aa, chain - ## HITS:1 COG:no KEGG:CV_1536 NR:ns ## KEGG: CV_1536 # Name: not_defined # Def: hypothetical protein # Organism: C.violaceum # Pathway: not_defined # 1 112 1 112 118 127 58.0 2e-28 MISIREQSYGLNVALYNEFTLEDFQELEQALLACKQRIHLPDILLDLSMLKDFTIDMAVE QIKFLNQHETDFGRAAVVTDDIWIKLGARLSSLLTNQHPKYFNDAAEAQAWLLESNSK >gi|289656364|gb|ADEA01000003.1| GENE 47 44861 - 45754 1265 297 aa, chain - ## HITS:1 COG:NMA1785 KEGG:ns NR:ns ## COG: NMA1785 COG0697 # Protein_GI_number: 15794678 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Neisseria meningitidis Z2491 # 8 293 6 291 300 339 70.0 4e-93 MSSPQTNKDPLGSCWMIAAALCFTLMNLCIKAAAQKFGLYSGELVFWRMSFAAAVLGITA KAQGRTFSTPHWKTHLNRSVIGSAAMLCLFYAVMHLPLATGVTLSYTSSIFLAVFSFLIF KERIAPYTQAVLVLGFAGVVLLLNPSFGSGQETAALAGLAGGAMSGWAYLQVRELSLLGE PGWRVVFYFSVTGMVLGAGWAAATGWHIPTADMLPYLCAVGLSALVAQLSMTRAYKVGNK FTVASLSYLTVVFSSLAGIVLLGDKITWQEIAGMVIIVASGILSGIKPIWIKQLFTR >gi|289656364|gb|ADEA01000003.1| GENE 48 45883 - 46578 754 231 aa, chain - ## HITS:1 COG:no KEGG:ABAYE3045 NR:ns ## KEGG: ABAYE3045 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 109 230 40 150 151 92 40.0 2e-17 MRHYGTIAHWNEARKFGAILEEYSQKEVFAPLAAFDRTDPPPTVGERVSFEMTVGRRNRD EAADIRYMDRFADEEEDGFQAEASDSVKKTALTAFIAGLIAFGGYYGYHYVAENSSKIIP HQQNEVIVKQVAEQIHADRQAWKAAVSGSGHGKAVKTESQPQEKAKADDSIGGRIMQLFN KEEGRYKCDGRQYCSEMTSLDEARYFVKHCPNTKMDGDHDGEPCESDSRWR >gi|289656364|gb|ADEA01000003.1| GENE 49 46768 - 48384 2262 538 aa, chain - ## HITS:1 COG:NMA0954 KEGG:ns NR:ns ## COG: NMA0954 COG0665 # Protein_GI_number: 15793911 # Func_class: E Amino acid transport and metabolism # Function: Glycine/D-amino acid oxidases (deaminating) # Organism: Neisseria meningitidis Z2491 # 1 537 1 537 539 649 62.0 0 MPILAWNTPPAPAELARVIETHPAPLHLIACLSENRMPDFPLSDAPTELEGRLKTRFDQT VKCLQFNSVNFLENLLPDVHIWLVPPHRADSLHEHFAPIEWQTEAVPQAAPKPVKPWFRR PQAITPPESALVIGAGIAGAATARKLAEHGVRVTVLEAGKAAQGGSGNRQGLLYAKISPH DTEQTELLLAGYGYTRRLLQDLLPDSDAWGGDGVLHLNFDEAERKRNQALGLQQHHTHLY RSVSADEAAQIAGIDVFSDGLYWPQGVWLNPPAVVRALLAHPLIALHEDTPLSSAEYDGA NWTAHTPRGSFSATHIIYCMGAHSPNAADANVSALPFRQIRGQTGVAAASGFSTRLRCAL SGESYISPSWQGQHCYGATFVLNSNDDAWHPHEEAANRAALQQLNPPLAQSLFEQNPLRS VSDDPFAQPQGHAALRCDSPDHLPVVGALGDITAMQTAYAKLALDKNYRLDNIPCPYLPN AYINTAHGTRGLSTAPVCAAAIAADILGLPQPLSQRLRTALHPNRAVIRAIVRQQPLL >gi|289656364|gb|ADEA01000003.1| GENE 50 48580 - 49200 890 206 aa, chain + ## HITS:1 COG:NMA0890 KEGG:ns NR:ns ## COG: NMA0890 COG0135 # Protein_GI_number: 15793859 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosylanthranilate isomerase # Organism: Neisseria meningitidis Z2491 # 1 203 1 203 208 278 68.0 4e-75 MNTIRIKICGITRPEDALAAAEAGADAVGLVFYAKSKRAVTAAQAKEIAAVLPPFVSAVA LFVNEQPDVIREILHQVPIDVIQFHGDEDDDFCRQFDRPYLKAVRVQSAADIQTACAKFP NARALLFDAYHPTEYGGTGQSFDWTMLSEDLGKPWILAGGLTPENVADAVRTSGAAAVDV SGGVESSAGIKDKEKMAAFVAAAKVV >gi|289656364|gb|ADEA01000003.1| GENE 51 49249 - 50151 900 300 aa, chain + ## HITS:1 COG:BS_yyaM KEGG:ns NR:ns ## COG: BS_yyaM COG0697 # Protein_GI_number: 16081133 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Bacillus subtilis # 1 290 1 285 305 108 27.0 1e-23 MEHYSVHLKLLGMAVLWGASWPMGRMLGQSLPPLTGGALRFVLASFLLLGWLFARSRFAT FAALSARQWLGLAAAASVGVCGYAVFFMLGLQAMPAGKAAVVVAVNPVLTLLLAAWLFGE RLNAKILAGMLLAVCGAITAVTQGQPLMVLSGGIKAGEWLIFGCVVCWAAYTLIGRAVLR GIDALTVTAATSFIGALMLSVVALWTDGMPFEAMAAMDARGWTALAWLVIGATVLAYAWY FEGVKTLGAGSAAAYITLVPIFGMLSSAWVLGEPLHISLVAGCAAAVGGMTLMRYGQKVV >gi|289656364|gb|ADEA01000003.1| GENE 52 50205 - 50810 612 201 aa, chain + ## HITS:1 COG:NMA0903 KEGG:ns NR:ns ## COG: NMA0903 COG3663 # Protein_GI_number: 15793869 # Func_class: L Replication, recombination and repair # Function: G:T/U mismatch-specific DNA glycosylase # Organism: Neisseria meningitidis Z2491 # 5 201 35 231 231 380 93.0 1e-105 MSAPLEIETHPFPALLPPQATVMMMGTFPPKEDKRAMQFHYPNFQNDMWRVYGLVFFNDA AHFQRSSEKAFDAEKIKAFLRERGIASCPTVLKAVREHGNASDKFLQVVETVDLAAVLAQ MPDCRHICTTGGKATEVLLDIQGGGIKMPKTGETVPFPFAGRDLTLTRLLSTSRAYPLSL AKKAAAYRAFFEMAGLCEKQL >gi|289656364|gb|ADEA01000003.1| GENE 53 50887 - 52089 1907 400 aa, chain + ## HITS:1 COG:NMB0699 KEGG:ns NR:ns ## COG: NMB0699 COG0133 # Protein_GI_number: 15676597 # Func_class: E Amino acid transport and metabolism # Function: Tryptophan synthase beta chain # Organism: Neisseria meningitidis MC58 # 1 400 1 400 400 779 96.0 0 MKNYQAPDEKGFFGEHGGLYVAETLIPALQELADAYKAAKNDPSFWEEFHRDLKHYVGRP SPVYHAARLSEHLGGAQIWLKREDLNHTGAHKVNNTIGQALLARRMGKKRVIAETGAGQH GVASATVAARFGMTCDVYMGADDIQRQMPNVFRMKLLGANVVSVDSGSRTLKDAMNEAMR EWVARVDDTFYIIGTAAGPAPYPEMVRDFQCVIGNEAKAQMQEAIGRQPDVAVACVGGGS NAIGLFHPYIGEENVRLVGVEAGGLGVDTPDHAAPITSKAPIGVLHGFRSYLMQDENGQV LGTHSVSAGLDYPGIGPEHSHLNDIQRVEYTVAKDDEALEAFDLLCRFEGIIPALESSHA LAWAVANAPKMGKDQVILVNLSGRGDKDINTVAKLKGIEL >gi|289656364|gb|ADEA01000003.1| GENE 54 52190 - 52711 510 173 aa, chain + ## HITS:1 COG:NMA0944 KEGG:ns NR:ns ## COG: NMA0944 COG3161 # Protein_GI_number: 15793902 # Func_class: H Coenzyme transport and metabolism # Function: 4-hydroxybenzoate synthetase (chorismate lyase) # Organism: Neisseria meningitidis Z2491 # 11 173 8 158 158 117 47.0 9e-27 MTRNQIPPLLWQPDIPESVALGYGKQMAALLQSPSLTAALRGLGFDFTVKLLDLGIGAAG AWFGPSEKQEEFIRDVLLCLDGEPVVWARSACEPHSQWRGVLDCGTQPLGERLFDGSLPL VRSAFEFSGVQECRTENGLSARAFAARRSWFGMRGERLWLVECFLPALGKYGG >gi|289656364|gb|ADEA01000003.1| GENE 55 52903 - 53103 292 66 aa, chain + ## HITS:1 COG:no KEGG:NMO_0909 NR:ns ## KEGG: NMO_0909 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 1 50 1 50 60 89 78.0 3e-17 MFWYIVGFCAFVVSLLALWVNASAFGMQDDGTPQSEYEKLLGLGTKLKDKEVAAKEREAA RFHPDD >gi|289656364|gb|ADEA01000003.1| GENE 56 53164 - 53859 912 231 aa, chain + ## HITS:1 COG:jhp1180 KEGG:ns NR:ns ## COG: jhp1180 COG0846 # Protein_GI_number: 15612245 # Func_class: K Transcription # Function: NAD-dependent protein deacetylases, SIR2 family # Organism: Helicobacter pylori J99 # 3 227 2 228 234 218 50.0 8e-57 MKKKCVVLTGAGISADSGLLTFRDAGGLWEGHKVTDVCTPEALERNPKLVIDFYNQRRLQ ANAAEPNAAHKALAELEKYYDVHIITQNVDGLHEKAGSSKVLHLHGELNKLRSVADENEI IGFTGEQTDDVRDSKGGPMRPHIVFFGEEVPLFPQAAEEMRDADVVIIVGTSMQVYPAAS LIHYAPPDADCYLVDPNPQGVGAGVEVIAERAASGVPKLAEYLIGRAGGQS >gi|289656364|gb|ADEA01000003.1| GENE 57 54061 - 55113 1562 350 aa, chain + ## HITS:1 COG:NMA1358 KEGG:ns NR:ns ## COG: NMA1358 COG0502 # Protein_GI_number: 15794279 # Func_class: H Coenzyme transport and metabolism # Function: Biotin synthase and related enzymes # Organism: Neisseria meningitidis Z2491 # 1 350 1 350 350 681 92.0 0 MTVSPVALRRKIERKPHPTARYWKKCDVEALFGLPFLDLVYQAAEIHRQNFNPREIQLST LLSIKTGGCPEDCAYCPQSAHHNTNLGKEQMMDVDEIVEKAKIAKSRGASRFCMGAAWRG PKPKDVETVSAIIKAVKGLGMETCGTFGMLEDGMAEDFKKAGLDYYNHNLDTDPDRYNDI IHTRKHEDRMDTLGKVRNAGLKVCCGGIVGMNETRAERAGLIASLANLDPQPESVPINQL VKVEGTPLADAEDLDWTEFVRTIAVARITMPHSYVRLSAGRSNMPESMQAMCFMAGANSI FYGDKLLTTENPDEDGDRLLMEKLDLYPLRFELEEEYEAAQETPKIKVDY >gi|289656364|gb|ADEA01000003.1| GENE 58 55175 - 55834 1161 219 aa, chain - ## HITS:1 COG:NMB1222 KEGG:ns NR:ns ## COG: NMB1222 COG0692 # Protein_GI_number: 15677095 # Func_class: L Replication, recombination and repair # Function: Uracil DNA glycosylase # Organism: Neisseria meningitidis MC58 # 1 219 1 219 219 340 73.0 2e-93 MQTWHEALGAEKEQPYFRHIIQSVRQEREAGRIIYPPAADVFNAFKATEFNQVKVVILGQ DPYHGAGQAHGLAFSVRPEIDIPPSLVNIYKELADDIPGFRIPRHGCLQHWAEQGVLLLN TVLTVRAGQAHSHAALGWEQFTDRVIAQLNEYREHIVFMLWGSHAQKKGAFIDRRRHLVL SSPHPSPLSAYRGFFGCKHFSQANAYLAAHGTAVIDWQV >gi|289656364|gb|ADEA01000003.1| GENE 59 55953 - 56963 1854 336 aa, chain - ## HITS:1 COG:NMA1682 KEGG:ns NR:ns ## COG: NMA1682 COG0180 # Protein_GI_number: 15794575 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Tryptophanyl-tRNA synthetase # Organism: Neisseria meningitidis Z2491 # 1 336 1 336 336 645 95.0 0 MSKKRVLTGVTTTGIPHLGNYVGAIRPAVREAQNPDTESFLFLADYHGIIKCHEPEMIHQ STQAVAATWLACGLDPERTTFYRQSDIPEVMELNWILTCITAKGLMNRAHAYKAAVQANV ENNQEDPDHGVEMGLYSYPILMTADILMFNANEVPVGRDQIQHVEMARDIAGRFNHRFKE VFTLPEVKIDENVELLVGLDGRKMSKSYGNTIPLWENDKKTQKSVNKIITNMKEPGEPKQ PDESPLFEIYKAFSTPSETAAFTQMLAEGLAWGEAKKLLAAKINAELAEPRERYNELTAN PSQIEDILQAGAAKARKEARELLDKVRDAVGIRRLK >gi|289656364|gb|ADEA01000003.1| GENE 60 57737 - 60310 1676 857 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 1 855 1 808 815 650 43 0.0 MRFDKLTAKFQQALAEAQSLALAADSSYLEAGFVLKALLDDPNSGAAALLAHAGVNVPQV KQRLQQHLNSLPKVSGQGGDILPSRELQAVLNLMDKAATKRGDAYIASELFLLALVQQND ATGKILKEAGATEQNINAAIDAVRGGQNVNDANAEDQRDALKKYTLDLTQRARDGKLDPV IGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVL DLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLK PALARGELHCIGATTLDEYRQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIH HGIDITDPAIVAAAELSDRYITDRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRRII QLKMEKMHVAKESDDASKKRLELIDEEIDGLQKEYADLDEIWKAEKAASSSTADIKKQMD DIKVKIEQAKRQGDFARASELEYGELPKLGAQLQAAESNPDGKKQNKLFRTEVGADEVAE IVSRMTGIPVSKMMEGERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPY GSFLFLGPTGVGKTELCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEE GGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTS NIGSQHIQQMGTQDYDAVKEAVMEEVKAYFRPEMINRIDEVVVFHGLNQENIRNIAKIQL KGLEKRLEAQHLHLKVDDAALDLIAKAGFDPVYGARPLKRAIQSEIENPLAMALLEGKYA PESTIHVKEEGGRLVFA >gi|289656364|gb|ADEA01000003.1| GENE 61 60591 - 62363 270 590 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 328 555 127 353 398 108 33 8e-23 MKTPPVHWQLVEPVRHRIYTAMLLSVAAALLWVASLAVTAFLFARVLAGRPSAGLAALLA GLVLMSYLLRMQSFKRSHFAAFELEKVLRLKLAERIGRAPPGLAVDSGAAALAQVAQNDV AALHAFVADSTPLYARSFAAPLFAFLILLFFDWRLALAAAAVLAAGMGVLSLVMKKGQSE MKAYAEAREQVSRAVVEFVQGMGVVRTFDGGAASFGRYSRALDGYLGYLKGWYKRNGLPA RLGLVVLSPLPTLLVLLWCGAYWYADGSLPFAAWLAVLLAGTGMAEAIMPYMALFHAVEG AKMSAERIAELLDTPVLSARGGGKTPEGGDIVFDKVCFSYPNRQDKALDSVSFTAKAGTW TALVGASGSGKSTVARLAARFWDADEGSICVGGTDVRDIDPDALMSQIAFVFQDNFLFTG SIADNIRLGIPDAAQADIENAARAANAHDFITKLPQGYATPVGERGASLSGGQRQRITIA RAILQSRPILILDEATAYTDAENEALIMGALRKLMRGKTVLMAAHRLSTVMHADNILVFD QGRLKEQGTHAQLLAQNGIYAELWRAHEQSKAWRYGGRGAAADTAGSPAV >gi|289656364|gb|ADEA01000003.1| GENE 62 62495 - 63202 1114 235 aa, chain + ## HITS:1 COG:PA1402 KEGG:ns NR:ns ## COG: PA1402 COG4122 # Protein_GI_number: 15596599 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Pseudomonas aeruginosa # 42 230 38 221 221 140 46.0 2e-33 MPKPTRQDFAFLNDAKTEAVLFDLYTASVRQIPGLIWHFLPQLPKLLGKGSGWTGENEAY FDDKYIPIVPQQGAFLYMQALAKGAKNIVEFGTSYGISTLYLAAAAKKNGGRVITTEYLP HKAEAARRHFAAAGLADYIELREGDALETLQDIAGGIDFVLLDGWPNLVCSVFKLLEPKL APRAAVAVDDVEGYAPAMQDYLDYVRNPANGYVSATLKPHKALEYSVKTGGADTA >gi|289656364|gb|ADEA01000003.1| GENE 63 63347 - 64000 981 217 aa, chain + ## HITS:1 COG:all7648 KEGG:ns NR:ns ## COG: all7648 COG0500 # Protein_GI_number: 17158784 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Nostoc sp. PCC 7120 # 15 152 15 152 191 70 34.0 2e-12 MELSAEQTAAQLRCPHGEAGIAFGQAMNLRNLTQIVSAFAAARLQNGDNILETGCGNGGL LGYILSQADGLHYTGLEISPLMHEQAQAFNASFIAAGQADYRLYDGGALPFADAAFHKAV SVNTVYFWDDAPFMLAELCRVLKSGGRLCLNFCEKDFMAKLPFAAHGFMLYDAADIRALA ENLPLRCISEQRSRDWAVSKSGKLVRREFVDLVFERV >gi|289656364|gb|ADEA01000003.1| GENE 64 64152 - 65915 232 587 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 347 569 132 353 398 94 30 2e-18 MSAPDAELKTASPAAIYRIVMAAAGEFAPQLRRCLWLLVLTAALQGLAFALFVPLFRALL AGGAAEVRSYLYAITSLFVLTTVTRWFSYDFDYNGHAAGAGDSLRRRLGLQLRRIPLQVL YRRRSGETGAMLAGTVDDVVNYTLTVSAMLIPALVIPAVFALCITWYDWRFGVLLAALFA LLFAVVKRMRPRLSADRSETAAALDDLNGELLEYMQGLPVLRSAGCTGERSARLAAAAER VRKVQEDVSVREGLPNLFIGSAVETAMLAALVFGLWQLSSGRTDAAFLAALIVGIVRFGE PLGYLLSYTAVYEMVVQGYLKLREFENIKPLPVTEGGKVPTAYDIEFDNVDFAYEGRKEN TLNRISLKIPARAMTALVGSSGCGKTTLARLIMRYADPQAGSIRIGGTDIRSLPEGELMK LVSIVFQDAYLFDDSVAENIRMGRFDASDEEVEQAARTAGCHDFISRLPQGYQTRVGDIG GRLSGGEKQRITIARALLKNAPIVILDEPTAALDTQSEVAVQQAIDALIRDKTVIVIAHR LSTVSGADNIAVMENGRIAEQGTHAALLAQDGRYAELWRYQNEDWAA >gi|289656364|gb|ADEA01000003.1| GENE 65 66035 - 66970 1151 311 aa, chain + ## HITS:1 COG:SP0764 KEGG:ns NR:ns ## COG: SP0764 COG0167 # Protein_GI_number: 15900658 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotate dehydrogenase # Organism: Streptococcus pneumoniae TIGR4 # 1 310 1 310 311 526 83.0 1e-149 MPSTQTQIAGFHFDNCLMNAAGVACMTVAELEEVRNSSAGSFVTKTATLDFRAGNPEPRY RDVPLGSINSMGLPNQGIDYYLDYLLELQNKVPGRTFFLSLVGMSPDETHTLLKKVQQSG FNGPTELNLSCPNVPGKPQIAYDFDTTEAILTDVFSYFTKPLGIKLPPYFDFVHFDQAAA VFNRFPLKFVNCVNSIGNGLYIEDETVVIRPKNGFGGIGGAYIKPTALANVHAFYCRLKP EIQIIGTGGVTSGRDAFEHILCGASMVQIGTALHQEGVAAFDRIGAELKAIMAEKGYGSL DDFRGKLKYLG >gi|289656364|gb|ADEA01000003.1| GENE 66 67070 - 67435 485 121 aa, chain - ## HITS:1 COG:STM4320 KEGG:ns NR:ns ## COG: STM4320 COG0789 # Protein_GI_number: 16767570 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 109 1 108 110 83 39.0 9e-17 MKISEFARRCGISVRMLRFYESAGILVPARTPSGYREYDERDIGFVRKAVMLNRAGLALK DIALLRDCLNDEPQNFCSELRGKLADTQARIRQQIDGLHRSEQLIAGLLAAEKASGGNEA V >gi|289656364|gb|ADEA01000003.1| GENE 67 67564 - 68229 815 221 aa, chain + ## HITS:1 COG:BS_ydeN KEGG:ns NR:ns ## COG: BS_ydeN COG3545 # Protein_GI_number: 16077593 # Func_class: R General function prediction only # Function: Predicted esterase of the alpha/beta hydrolase fold # Organism: Bacillus subtilis # 31 209 4 177 190 117 36.0 1e-26 MNRRRFCAAAGAGVLLAGCKSLPKPDGGPVRVFIIHGYGATVADHWFPWLAQQLRRRGME VVPVPLPDSLHPDYGRWQDALARTVGMPSGRTVLVAHSLGTVSLLHYLSRIRPHKIGGLV LVSAFGARIPTLPQINGFDVDGYVDRCPIDFAAVRRMTDRIALFTADNDNIVPPENTRRL ARQLGGKPEEITGGGHFLGSDGFTEFPQVLRAIERMAAEIG >gi|289656364|gb|ADEA01000003.1| GENE 68 68425 - 69762 1867 445 aa, chain + ## HITS:1 COG:HI0281 KEGG:ns NR:ns ## COG: HI0281 COG0477 # Protein_GI_number: 16272237 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Haemophilus influenzae # 10 443 4 437 438 564 72.0 1e-160 MNSPQHHQHHLRNNPYKVAIASMIGTAIEFYDYYIYAAAAVLVFNSQFFDKSDPAVATLL SLSTLALAFFARPVGSALFGHFGDKIGRKKTLVASLLTMGLSTVCIGLLPTYQEIGLLAP LLLCVCRIGQGIGLGGEWGGAALVATENAPEGKRAWFGTFPQLGAPIGLLMANGVFFLIS SIIGHDALVEWGWRIPFVASLVLVLVGLWMRMTMHESHVYREAEEQGKTKAAPVKEVFAG HRKPILQGTFIMVSTYVLFYIMTAFAQVYSKSPAKLSEFGHPQGLGIPANTFTGFLMISA VVFGAFISFSGIYADKIGRRRFLIWVTFAMLAFGLLMPQFLTHGSPASVLAFLLIGMALM GLTFGPMAALLPELFPTEVRYSGASLAYNFAAIIGASIATLVAIELNAYYGIIGVGVYLA ANCVLTLAALISTHETKDVDLVDTQ >gi|289656364|gb|ADEA01000003.1| GENE 69 69815 - 70339 325 174 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298368659|ref|ZP_06979977.1| ## NR: gi|298368659|ref|ZP_06979977.1| hypothetical protein HMPREF9016_00326 [Neisseria sp. oral taxon 014 str. F0314] # 1 174 1 174 174 292 100.0 6e-78 MELEQKIDSLADNVIALAGQTEKRAKNAEQLAVQAQRILDSSSSRLDGSAERIRQEAAEA VRSGLEQSVGKFTERLETTGRWLLETVREVEGRQQKSAKDLKKLVWVSVAVFALTGLLCF GTVIYLIQSAKTEMKRVEWIADINKAVENGKLSRCGEDGGICAKVKGKPVRLDK >gi|289656364|gb|ADEA01000003.1| GENE 70 70348 - 71643 1360 431 aa, chain - ## HITS:1 COG:no KEGG:XCV3566 NR:ns ## KEGG: XCV3566 # Name: not_defined # Def: hypothetical protein # Organism: X.campestris_vesicatoria # Pathway: not_defined # 3 294 2 297 450 159 39.0 2e-37 MSKITKQQQADLAADAYNIRAVTKPNDAPISIGGNYYKILAVHNSRSTGYQGTVYQDVRT NEIIVAHRGTESPKADWFDAYTDWNMVAKSINYQAAESEKLTRQAMMLADVFHQNYPYLP RPNITHVGHSLGGAHVEIQAYRFGHEGATFNGYGAVGMHGVRKGGGDVTNYVKAADVVSA ANAHYGKVVVLATEGDLEPLRKYGYNNQRNTMAIQAVAAAAASVGSAHSSLNFVGKDSIL SDRNYDRARRLADENKFMIQDYRGDVETSKNAIAAAKFATSNPIEKIEILRNRLEKYDRE QERIKEIINSVPPPKSLFDSRMLHMMQNDGTRPDAGKEAYADAGKPDISKPLAKNASADE FREYGFAALLSDDDDKMHAALDSLLDSDVGRGLRQNADKVYAAQEREQEMARLAEEQARQ VDAPVMRMGRG >gi|289656364|gb|ADEA01000003.1| GENE 71 71640 - 72296 417 218 aa, chain - ## HITS:1 COG:no KEGG:XAC3174 NR:ns ## KEGG: XAC3174 # Name: not_defined # Def: hypothetical protein # Organism: X.axonopodis # Pathway: not_defined # 24 216 3 190 192 100 32.0 5e-20 MKPMTALMTAAIFSVLSLNACGGSEKSMSIQEQTEARFQLNPHPKQAYRLKIKINDAPGP LKLMGSMSVGYGARNCSYIINRIEGVAANPEKDLEIEVRQLGEFEYEAIVYTDAMQDENY FNEGVCHWQIEGFGLGFKATGEPSETRFSFGDIFNDLIEKKTLTKYFSKKAYPYSVTKDN SIFPNYVDSGLPSLKLYNIEKYRNDMFTITVTLEEVQS >gi|289656364|gb|ADEA01000003.1| GENE 72 72353 - 72469 123 38 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSNITRQQQTDIALDACNTCAFTVNLSTNSLIHHFRYN >gi|289656364|gb|ADEA01000003.1| GENE 73 72472 - 73125 538 217 aa, chain - ## HITS:1 COG:no KEGG:XAC3174 NR:ns ## KEGG: XAC3174 # Name: not_defined # Def: hypothetical protein # Organism: X.axonopodis # Pathway: not_defined # 24 217 3 190 192 113 32.0 6e-24 MKPMTALMTAAVFSVLSLNACGGSEKSMSIQEQTEARFQLNPHPKQAYRLRIKINDAPGP LKLMGKFGVGYKAENCTYIINQIEGAPAKPEKNLQTDIRQLGEFEYETVVYADALLDEDY FGEGVCHWQPEGFGFSLKATGGAEETEFNFSEIMKYLLDKKTLTKYYWKGGYPYFKDVHG SNSNIENIVSFGGDALTDFSADRQQDLFTITVTLEEL >gi|289656364|gb|ADEA01000003.1| GENE 74 73183 - 73299 80 38 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSHINKQQQADLAVDACNICVFTVNLSTNSLIHHFRYN >gi|289656364|gb|ADEA01000003.1| GENE 75 73296 - 73478 128 60 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298370645|ref|ZP_06981954.1| ## NR: gi|298370645|ref|ZP_06981954.1| secreted protein [Neisseria sp. oral taxon 014 str. F0314] # 1 60 158 217 217 120 100.0 3e-26 MEKKTLTKYYWKWSYPYSKREDGTLYSDSVDFGIVSPEIYSAEQHKEMFTITVTLEEVQP Prediction of potential genes in microbial genomes Time: Thu May 26 13:05:34 2011 Seq name: gi|289656363|gb|ADEA01000004.1| Neisseria sp. oral taxon 014 str. F0314 cont1.4, whole genome shotgun sequence Length of sequence - 4336 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 2, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 488 397 ## XCC3126 hypothetical protein - Prom 542 - 601 5.9 - Term 738 - 793 7.3 2 2 Op 1 27/0.000 - CDS 841 - 3927 4237 ## COG0841 Cation/multidrug efflux pump 3 2 Op 2 . - CDS 3930 - 4328 468 ## COG0845 Membrane-fusion protein Predicted protein(s) >gi|289656363|gb|ADEA01000004.1| GENE 1 2 - 488 397 162 aa, chain - ## HITS:1 COG:no KEGG:XCC3126 NR:ns ## KEGG: XCC3126 # Name: not_defined # Def: hypothetical protein # Organism: X.campestris # Pathway: not_defined # 18 158 24 166 219 85 33.0 7e-16 MKPMTALMTAATFSVLSLNACGGSEKSMSIQEQTEARFQLNPHPKQAYRLRIKINDAPGP LKLMGNFGVGYKAENCSYIINRIEGAPASPEKNVETKIRQLGEFEYETVVYVDAMLDEDY FGEGICHWKPDGFGVAFKATGHPEETKFNFGDFLDDLMEKKR >gi|289656363|gb|ADEA01000004.1| GENE 2 841 - 3927 4237 1028 aa, chain - ## HITS:1 COG:CC3197 KEGG:ns NR:ns ## COG: CC3197 COG0841 # Protein_GI_number: 16127427 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Caulobacter vibrioides # 1 1012 15 1030 1041 834 45.0 0 MQLSSWAIRRPIPTIVLFLLLTVMGIFSFLQLPVNATPNVSFPIVTVSISRAGASPDEME NSVTRQVETAVAGMAGVRHITSEISDGISVTTVEFRLGTDTDRAVNDVRNAVTQIRGDLP QGIDEPLVERVEVEGGALSYYALESPEMDAAALSWFVDDTVSRRLLAVSGVQKVVRSGGS KREITVQLRPDRLEALGITADQVNSQLTQTNANIPAGRTVQGGSELNLRVLASAKGVDAL ADTPIALSDGRRAKLSELAYVSDGHAEIRSRARLNGREVVGFNVFRAKGSSDTEVAKGVE AAVAELQKQHPEIRIRNVFSTVESTRESYDTAIDTLLEGALLTVLVVFLFLRNWRSTLVA AVALPLSILPAFVVMYAFDYTLNNVTLLGLTLVVGILVDDAIVEIENIENHLATGKRPFP AAIDAADAIGFAVVAITGTIVAVFLPVSFISGVVGQYFSQFGITVSAAVLSSLLTARLAT PLLAAYLLQPHKGATSDERTHGFFMGSYLKLLTWALQHRKTTMLAGGLVLAASFAMLPLL PTGFIPKSDVGYSQVTVSLPPGSTLAETDRTLHALSDGIRRHPEVDAVYAAAGSDSDTAK GELLVRLKAHGERDISQSAFEQKLRGELAQTPDIRFFFKNENAQRDINIILTGDDAAKLS ETARKLKTQMQGIAGAANVQINEPLPKPELQIRLLPDEAARAGVTPQAVGNLLRIASIGG QDAESARYNLSDRQISIRTALPENARNDIQTLKNLRVPSSNGGSVPLHTVADIRYAAGSA TITRFDRERRISVEADLNSGHTIGEVLTQINALPVMQNLPAGVRTPEYGDAEYMNEMFSR FGMAMGFGILMVLVVLVLLFRDFLQPVTIITALPLSLGGALGGLLLYGAALDLSSVIGIL MLMGIVTKNSILLVDFIIEKRRHGTARARAIYRSGAERARPIIMTTIAMAAGMLPSVFAG GSGAAFRAPMAVVVICGLIVSTALSLVFVPVFYSLADDLRQWLAPRLARLTSVTAEDREA AERVGNDG >gi|289656363|gb|ADEA01000004.1| GENE 3 3930 - 4328 468 132 aa, chain - ## HITS:1 COG:CC3196 KEGG:ns NR:ns ## COG: CC3196 COG0845 # Protein_GI_number: 16127426 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Caulobacter vibrioides # 6 132 245 369 369 70 36.0 7e-13 MRGRNEAVGGTVRLVPPEIDSSTRLGKVRITLAHSDGLYTGTYGEANIRLPSYRAAAALP ETAVSFDSEGKASVLAVDGNGRVSRVAVTAGRKQGGMVEIVSGLENGRAVVRRASAFVNE GDNVKAVEEKGK Prediction of potential genes in microbial genomes Time: Thu May 26 13:06:42 2011 Seq name: gi|289656362|gb|ADEA01000005.1| Neisseria sp. oral taxon 014 str. F0314 cont1.5, whole genome shotgun sequence Length of sequence - 197998 bp Number of predicted genes - 195, with homology - 188 Number of transcription units - 125, operones - 48 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 1/0.255 - CDS 1 - 742 874 ## COG0845 Membrane-fusion protein - Prom 882 - 941 1.6 - Term 921 - 985 8.4 2 2 Tu 1 . - CDS 1031 - 1822 1084 ## COG3713 Outer membrane protein V - Prom 1864 - 1923 5.3 + Prom 1875 - 1934 3.6 3 3 Op 1 . + CDS 1959 - 2432 708 ## COG1846 Transcriptional regulators + Term 2453 - 2495 9.1 4 3 Op 2 . + CDS 2587 - 2715 118 ## gi|298368670|ref|ZP_06979988.1| transcriptional regulator, LysR family + Term 2808 - 2848 9.8 - Term 2861 - 2905 -0.1 5 4 Op 1 . - CDS 2925 - 3884 1758 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs 6 4 Op 2 . - CDS 3905 - 4318 599 ## NMB1221 hypothetical protein - Prom 4511 - 4570 6.9 + Prom 4448 - 4507 5.0 7 5 Tu 1 . + CDS 4538 - 5074 721 ## NMB1470 hypothetical protein + Term 5101 - 5142 6.2 8 6 Tu 1 . - CDS 5162 - 6076 1099 ## CV_0489 hypothetical protein - Prom 6135 - 6194 1.6 9 7 Tu 1 . - CDS 6206 - 7156 1217 ## COG1092 Predicted SAM-dependent methyltransferases - Prom 7359 - 7418 3.8 + Prom 7199 - 7258 5.9 10 8 Tu 1 . + CDS 7494 - 8825 1758 ## COG0513 Superfamily II DNA and RNA helicases + Term 8905 - 8945 9.8 11 9 Tu 1 . - CDS 8936 - 9541 969 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - Prom 9568 - 9627 4.0 + Prom 9524 - 9583 2.6 12 10 Op 1 5/0.000 + CDS 9693 - 11567 2567 ## COG0457 FOG: TPR repeat + Term 11577 - 11625 12.6 13 10 Op 2 13/0.000 + CDS 11632 - 12219 679 ## COG3017 Outer membrane lipoprotein involved in outer membrane biogenesis 14 10 Op 3 . + CDS 12230 - 13075 538 ## COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase + Term 13126 - 13184 8.3 + TRNA 13086 - 13161 71.6 # Gln TTG 0 0 + TRNA 13180 - 13255 69.8 # Gln CTG 0 0 + TRNA 13280 - 13355 71.6 # Gln TTG 0 0 15 11 Tu 1 . - CDS 13396 - 13557 63 ## - Prom 13606 - 13665 3.2 + Prom 13568 - 13627 5.5 16 12 Tu 1 . + CDS 13671 - 14012 229 ## gi|298368681|ref|ZP_06979999.1| conserved hypothetical protein + Term 14029 - 14081 13.4 - Term 14024 - 14062 1.4 17 13 Tu 1 . - CDS 14080 - 15489 1573 ## COG0007 Uroporphyrinogen-III methylase - Prom 15516 - 15575 4.0 + Prom 15635 - 15694 5.5 18 14 Tu 1 . + CDS 15764 - 18829 4019 ## COG0013 Alanyl-tRNA synthetase + Prom 18836 - 18895 7.4 19 15 Op 1 3/0.036 + CDS 18927 - 19754 361 ## COG0266 Formamidopyrimidine-DNA glycosylase 20 15 Op 2 . + CDS 19822 - 20586 372 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase + Term 20600 - 20637 -0.5 + Prom 20670 - 20729 5.7 21 16 Tu 1 . + CDS 20778 - 21515 1112 ## COG0678 Peroxiredoxin + Term 21588 - 21626 -0.9 + Prom 21772 - 21831 7.4 22 17 Tu 1 . + CDS 21931 - 23337 328 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 + Term 23366 - 23426 18.2 - Term 23358 - 23410 10.2 23 18 Tu 1 . - CDS 23428 - 24372 1003 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 24401 - 24460 5.1 + Prom 24363 - 24422 6.3 24 19 Op 1 . + CDS 24502 - 24837 661 ## COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit + Prom 24879 - 24938 3.2 25 19 Op 2 2/0.200 + CDS 24967 - 25335 572 ## COG0607 Rhodanese-related sulfurtransferase + Term 25342 - 25382 12.2 26 20 Tu 1 . + CDS 25408 - 25899 599 ## COG3439 Uncharacterized conserved protein + Term 25974 - 26012 5.3 + Prom 25911 - 25970 2.5 27 21 Op 1 . + CDS 26028 - 26741 863 ## COG0220 Predicted S-adenosylmethionine-dependent methyltransferase + Term 26747 - 26807 15.2 + Prom 26745 - 26804 2.1 28 21 Op 2 . + CDS 26828 - 27913 1557 ## COG1408 Predicted phosphohydrolases + Term 27942 - 27985 10.0 - Term 27919 - 27981 12.2 29 22 Tu 1 . - CDS 27998 - 29626 2792 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains - Prom 29647 - 29706 1.6 + Prom 29606 - 29665 4.5 30 23 Op 1 . + CDS 29751 - 29945 169 ## gi|298368694|ref|ZP_06980012.1| conserved hypothetical protein 31 23 Op 2 . + CDS 29962 - 30411 567 ## gi|298368696|ref|ZP_06980014.1| lipoic acid synthetase + Term 30433 - 30486 16.2 - Term 30421 - 30472 18.1 32 24 Op 1 . - CDS 30496 - 31422 1534 ## COG0130 Pseudouridine synthase 33 24 Op 2 . - CDS 31424 - 31834 158 ## gi|298368698|ref|ZP_06980016.1| conserved hypothetical protein 34 24 Op 3 . - CDS 31917 - 32288 747 ## COG0858 Ribosome-binding factor A - Prom 32350 - 32409 4.5 + Prom 32309 - 32368 3.1 35 25 Tu 1 . + CDS 32407 - 33447 1094 ## COG0673 Predicted dehydrogenases and related proteins + Term 33555 - 33591 -0.4 36 26 Tu 1 . - CDS 33779 - 34825 1770 ## COG0468 RecA/RadA recombinase - Prom 34893 - 34952 8.9 37 27 Tu 1 . - CDS 34985 - 35710 809 ## COG0590 Cytosine/adenosine deaminases 38 28 Op 1 . - CDS 35819 - 36760 1188 ## COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase - Prom 36782 - 36841 4.6 - Term 36791 - 36832 8.0 39 28 Op 2 . - CDS 36846 - 38360 2224 ## COG4262 Predicted spermidine synthase with an N-terminal membrane domain - Prom 38452 - 38511 4.8 + Prom 38404 - 38463 4.8 40 29 Tu 1 . + CDS 38488 - 38886 516 ## COG3766 Predicted membrane protein + Term 39068 - 39135 6.1 - Term 39062 - 39111 12.2 41 30 Tu 1 . - CDS 39137 - 39961 757 ## gi|298368706|ref|ZP_06980024.1| conserved hypothetical protein - Prom 40011 - 40070 5.0 + Prom 39933 - 39992 6.9 42 31 Op 1 . + CDS 40170 - 40292 105 ## 43 31 Op 2 . + CDS 40379 - 41401 1384 ## COG4260 Putative virion core protein (lumpy skin disease virus) + Term 41409 - 41448 10.0 + Prom 41416 - 41475 3.9 44 32 Op 1 . + CDS 41561 - 43090 1799 ## RS05340 hypothetical protein 45 32 Op 2 . + CDS 43094 - 43264 268 ## 46 32 Op 3 . + CDS 43261 - 43617 401 ## COG1586 S-adenosylmethionine decarboxylase 47 32 Op 4 . + CDS 43674 - 45290 1822 ## BamMC406_4801 hypothetical protein - TRNA 45732 - 45808 82.1 # Pro GGG 0 0 + Prom 45912 - 45971 5.3 48 33 Op 1 . + CDS 45995 - 47374 1465 ## COG3264 Small-conductance mechanosensitive channel 49 33 Op 2 . + CDS 47374 - 47817 424 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes + Prom 47824 - 47883 1.9 50 33 Op 3 . + CDS 47909 - 48937 1257 ## COG0547 Anthranilate phosphoribosyltransferase + Term 48961 - 49011 14.1 - Term 48940 - 49006 24.1 51 34 Op 1 . - CDS 49020 - 49586 946 ## COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family - Prom 49637 - 49696 2.9 - Term 49653 - 49712 12.6 52 34 Op 2 . - CDS 49727 - 50290 976 ## COG2353 Uncharacterized conserved protein - Prom 50320 - 50379 6.0 + Prom 50355 - 50414 4.5 53 35 Tu 1 . + CDS 50542 - 51936 1460 ## COG0477 Permeases of the major facilitator superfamily 54 36 Op 1 2/0.200 + CDS 52057 - 53592 2075 ## COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes 55 36 Op 2 . + CDS 53624 - 54151 206 ## PROTEIN SUPPORTED gi|167856514|ref|ZP_02479226.1| 50S ribosomal protein L1 + Term 54154 - 54202 10.3 56 37 Tu 1 . + CDS 54330 - 55235 1145 ## COG0408 Coproporphyrinogen III oxidase + Term 55248 - 55293 11.3 + Prom 55300 - 55359 2.9 57 38 Op 1 . + CDS 55463 - 57322 3221 ## COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase 58 38 Op 2 . + CDS 57397 - 57528 181 ## + Term 57543 - 57585 10.2 + Prom 57543 - 57602 4.2 59 39 Tu 1 . + CDS 57721 - 57942 421 ## gi|298368722|ref|ZP_06980040.1| conserved hypothetical protein + Term 57962 - 58003 6.2 + Prom 57972 - 58031 4.3 60 40 Op 1 . + CDS 58066 - 59358 1534 ## NGO0683 hypothetical protein + Prom 59361 - 59420 3.9 61 40 Op 2 . + CDS 59443 - 59676 330 ## gi|298368724|ref|ZP_06980042.1| conserved hypothetical protein 62 40 Op 3 . + CDS 59700 - 60137 501 ## COG3536 Uncharacterized protein conserved in bacteria 63 40 Op 4 . + CDS 60158 - 61081 772 ## COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III 64 40 Op 5 . + CDS 61111 - 61848 332 ## PROTEIN SUPPORTED gi|163754278|ref|ZP_02161401.1| 30S ribosomal protein S15 + Term 61867 - 61907 11.5 - Term 61849 - 61899 14.1 65 41 Tu 1 . - CDS 61904 - 63811 2985 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains - Prom 63836 - 63895 4.6 - Term 63862 - 63906 13.0 66 42 Tu 1 . - CDS 63919 - 64128 412 ## COG2608 Copper chaperone - Prom 64161 - 64220 3.8 + Prom 64261 - 64320 4.6 67 43 Tu 1 . + CDS 64346 - 65539 1545 ## COG2814 Arabinose efflux permease + Term 65570 - 65620 12.2 - Term 65558 - 65608 12.5 68 44 Op 1 . - CDS 65632 - 66066 514 ## NMC1129 hypothetical protein 69 44 Op 2 . - CDS 66059 - 67366 2374 ## COG0460 Homoserine dehydrogenase - Prom 67483 - 67542 3.2 + Prom 67432 - 67491 3.1 70 45 Tu 1 . + CDS 67546 - 67917 318 ## COG3737 Uncharacterized conserved protein + Term 67950 - 67992 10.3 71 46 Tu 1 . - CDS 68004 - 68795 1277 ## COG0171 NAD synthase - Prom 68876 - 68935 6.6 + Prom 68986 - 69045 4.1 72 47 Tu 1 . + CDS 69065 - 70609 1777 ## COG0477 Permeases of the major facilitator superfamily + Term 70627 - 70667 10.6 - Term 70609 - 70660 15.6 73 48 Op 1 . - CDS 70698 - 71183 647 ## COG1607 Acyl-CoA hydrolase 74 48 Op 2 . - CDS 71259 - 72329 1681 ## COG0598 Mg2+ and Co2+ transporters - Term 72530 - 72554 -1.0 75 49 Tu 1 . - CDS 72703 - 74514 2893 ## COG1217 Predicted membrane GTPase involved in stress response - Prom 74634 - 74693 5.3 + Prom 74792 - 74851 6.1 76 50 Op 1 2/0.200 + CDS 74990 - 75454 803 ## COG2193 Bacterioferritin (cytochrome b1) 77 50 Op 2 . + CDS 75483 - 75956 877 ## COG2193 Bacterioferritin (cytochrome b1) + Term 76006 - 76040 4.5 - Term 76042 - 76090 16.4 78 51 Tu 1 . - CDS 76098 - 76535 727 ## COG1607 Acyl-CoA hydrolase - Prom 76589 - 76648 4.7 + Prom 76476 - 76535 3.6 79 52 Tu 1 . + CDS 76640 - 77578 1326 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) + Term 77589 - 77641 17.2 80 53 Op 1 . - CDS 77640 - 78212 560 ## PROTEIN SUPPORTED gi|134277849|ref|ZP_01764564.1| ribosomal protein S16 81 53 Op 2 . - CDS 78221 - 78943 1060 ## COG0005 Purine nucleoside phosphorylase 82 53 Op 3 . - CDS 78966 - 79139 133 ## gi|298368746|ref|ZP_06980064.1| hypothetical protein HMPREF9016_00413 83 53 Op 4 . - CDS 79198 - 80268 1808 ## COG0628 Predicted permease - Prom 80291 - 80350 3.8 + Prom 80377 - 80436 4.6 84 54 Tu 1 . + CDS 80507 - 81544 1018 ## PROTEIN SUPPORTED gi|169632702|ref|YP_001706438.1| phosphoribosylaminoimidazole synthetase + Term 81565 - 81611 13.2 + Prom 81547 - 81606 3.9 85 55 Op 1 . + CDS 81736 - 82506 394 ## SSA_0069 hypothetical protein + Term 82554 - 82591 -0.4 86 55 Op 2 . + CDS 82686 - 83330 827 ## COG0110 Acetyltransferase (isoleucine patch superfamily) + Term 83397 - 83435 10.2 - Term 83380 - 83427 13.0 87 56 Op 1 . - CDS 83462 - 85288 2812 ## COG1626 Neutral trehalase 88 56 Op 2 . - CDS 85269 - 86504 1545 ## COG0738 Fucose permease - Prom 86558 - 86617 7.2 - Term 86590 - 86641 11.3 89 57 Tu 1 . - CDS 86660 - 87316 898 ## Cpin_6784 hypothetical protein - Prom 87389 - 87448 2.8 + Prom 87349 - 87408 4.9 90 58 Tu 1 . + CDS 87437 - 88732 1483 ## COG0128 5-enolpyruvylshikimate-3-phosphate synthase + Term 88774 - 88814 -0.8 - Term 88948 - 88985 3.0 91 59 Op 1 . - CDS 89053 - 89586 880 ## COG0221 Inorganic pyrophosphatase - Prom 89619 - 89678 3.1 92 59 Op 2 . - CDS 89680 - 90264 676 ## COG0512 Anthranilate/para-aminobenzoate synthases component II 93 59 Op 3 . - CDS 90306 - 90641 371 ## gi|298368757|ref|ZP_06980075.1| conserved hypothetical protein 94 60 Tu 1 . - CDS 90745 - 91515 1093 ## COG3568 Metal-dependent hydrolase - Prom 91560 - 91619 6.1 95 61 Tu 1 . - CDS 91912 - 92685 1196 ## COG1469 Uncharacterized conserved protein - Prom 92761 - 92820 3.7 + Prom 92777 - 92836 4.2 96 62 Op 1 . + CDS 92866 - 94023 1732 ## COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases + Prom 94027 - 94086 4.1 97 62 Op 2 . + CDS 94115 - 94894 1224 ## COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 + Term 94923 - 94964 10.4 - Term 94911 - 94950 10.0 98 63 Tu 1 . - CDS 94975 - 96354 2031 ## COG1066 Predicted ATP-dependent serine protease - Term 96388 - 96438 13.1 99 64 Op 1 8/0.000 - CDS 96483 - 97961 2393 ## COG0793 Periplasmic protease - Prom 98073 - 98132 6.2 100 64 Op 2 . - CDS 98159 - 99925 2009 ## COG4942 Membrane-bound metallopeptidase - Prom 100114 - 100173 5.5 101 65 Op 1 2/0.200 + CDS 100137 - 100691 468 ## COG3045 Uncharacterized protein conserved in bacteria 102 65 Op 2 8/0.000 + CDS 100701 - 101249 551 ## COG1678 Putative transcriptional regulator 103 65 Op 3 . + CDS 101242 - 101703 494 ## COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) + Term 101714 - 101761 14.1 - Term 101704 - 101745 9.6 104 66 Op 1 . - CDS 101770 - 102408 837 ## COG0586 Uncharacterized membrane-associated protein 105 66 Op 2 . - CDS 102549 - 103979 2336 ## COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) - Prom 103999 - 104058 3.8 106 67 Tu 1 . - CDS 104082 - 104708 544 ## COG2990 Uncharacterized protein conserved in bacteria - Prom 104844 - 104903 2.4 + Prom 104332 - 104391 2.1 107 68 Tu 1 . + CDS 104616 - 104807 145 ## + Term 104811 - 104846 0.3 108 69 Op 1 31/0.000 - CDS 104954 - 106411 449 ## PROTEIN SUPPORTED gi|163737840|ref|ZP_02145257.1| 30S ribosomal protein S4 - Prom 106458 - 106517 4.4 - Term 106471 - 106505 -0.8 109 69 Op 2 . - CDS 106564 - 106854 500 ## COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit - Prom 106921 - 106980 5.6 + Prom 106850 - 106909 5.6 110 70 Op 1 22/0.000 + CDS 107083 - 108120 815 ## COG1077 Actin-like ATPase involved in cell morphogenesis 111 70 Op 2 19/0.000 + CDS 108133 - 108993 751 ## COG1792 Cell shape-determining protein 112 70 Op 3 3/0.036 + CDS 108998 - 109501 164 ## COG2891 Cell shape-determining protein 113 70 Op 4 19/0.000 + CDS 109507 - 111555 1604 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 114 70 Op 5 . + CDS 111509 - 112675 897 ## COG0772 Bacterial cell division membrane protein 115 70 Op 6 2/0.200 + CDS 112678 - 113343 787 ## COG2095 Multiple antibiotic transporter + Prom 113361 - 113420 5.2 116 71 Tu 1 . + CDS 113539 - 114882 1204 ## COG1012 NAD-dependent aldehyde dehydrogenases + Term 114909 - 114947 8.3 - Term 114890 - 114942 9.6 117 72 Tu 1 . - CDS 114971 - 115810 1103 ## COG0501 Zn-dependent protease with chaperone function - Prom 115954 - 116013 3.8 118 73 Op 1 2/0.200 - CDS 116045 - 119680 3842 ## COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) 119 73 Op 2 . - CDS 119766 - 120674 1321 ## COG2837 Predicted iron-dependent peroxidase - Prom 120700 - 120759 3.9 - Term 120723 - 120765 8.2 120 74 Tu 1 . - CDS 120789 - 121430 986 ## gi|298368783|ref|ZP_06980101.1| lipoprotein - Prom 121463 - 121522 4.6 + Prom 121397 - 121456 1.9 121 75 Tu 1 . + CDS 121592 - 121942 424 ## COG1393 Arsenate reductase and related proteins, glutaredoxin family + Prom 121975 - 122034 3.9 122 76 Op 1 2/0.200 + CDS 122064 - 123896 2726 ## COG0760 Parvulin-like peptidyl-prolyl isomerase + Term 123906 - 123936 3.3 123 76 Op 2 . + CDS 123975 - 124580 717 ## COG0353 Recombinational DNA repair protein (RecF pathway) + Term 124694 - 124735 4.5 - Term 124682 - 124720 10.2 124 77 Tu 1 . - CDS 124743 - 125027 384 ## NMC1136 putative periplasmic protein - Prom 125199 - 125258 3.7 + Prom 125144 - 125203 4.7 125 78 Op 1 23/0.000 + CDS 125237 - 126487 1389 ## COG4591 ABC-type transport system, involved in lipoprotein release, permease component 126 78 Op 2 2/0.200 + CDS 126480 - 127169 255 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 + Term 127209 - 127266 9.5 + Prom 127188 - 127247 1.9 127 79 Tu 1 . + CDS 127272 - 129020 1108 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member + Term 129056 - 129099 3.0 + Prom 129193 - 129252 6.8 128 80 Tu 1 . + CDS 129372 - 130493 897 ## gi|298368791|ref|ZP_06980109.1| hypothetical protein HMPREF9016_00458 + Term 130514 - 130545 2.5 - Term 130500 - 130533 2.1 129 81 Tu 1 . - CDS 130577 - 130978 366 ## COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) - Prom 131191 - 131250 4.6 + Prom 131023 - 131082 7.0 130 82 Op 1 3/0.036 + CDS 131179 - 132138 824 ## COG0825 Acetyl-CoA carboxylase alpha subunit + Term 132159 - 132200 9.3 131 82 Op 2 . + CDS 132220 - 133536 792 ## COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control + Term 133543 - 133580 -0.7 132 82 Op 3 . + CDS 133607 - 134206 387 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 133 82 Op 4 . + CDS 134209 - 134805 604 ## gi|298368796|ref|ZP_06980114.1| sigma-E factor negative regulatory protein + Term 134827 - 134873 11.3 + Prom 134846 - 134905 3.4 134 83 Op 1 . + CDS 134925 - 135722 785 ## COG0566 rRNA methylases 135 83 Op 2 . + CDS 135782 - 136444 919 ## COG3318 Predicted metal-binding protein related to the C-terminal domain of SecA + Term 136458 - 136514 20.7 - Term 136446 - 136501 20.5 136 84 Op 1 . - CDS 136511 - 137002 890 ## COG2839 Uncharacterized protein conserved in bacteria 137 84 Op 2 . - CDS 137033 - 137992 1544 ## COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control - Prom 138025 - 138084 3.6 - Term 138065 - 138102 9.1 138 85 Op 1 2/0.200 - CDS 138119 - 138973 1506 ## COG0682 Prolipoprotein diacylglyceryltransferase 139 85 Op 2 . - CDS 139063 - 140193 1835 ## COG2866 Predicted carboxypeptidase 140 85 Op 3 . - CDS 140228 - 140698 631 ## COG2110 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 - Prom 140728 - 140787 4.3 + Prom 140701 - 140760 1.5 141 86 Tu 1 . + CDS 140882 - 141769 1665 ## COG0548 Acetylglutamate kinase + Term 141788 - 141837 15.6 - Term 141781 - 141820 10.0 142 87 Op 1 . - CDS 141845 - 142291 340 ## gi|298368805|ref|ZP_06980123.1| conserved hypothetical protein - Term 142300 - 142350 10.6 143 87 Op 2 . - CDS 142375 - 144372 2782 ## COG0323 DNA mismatch repair enzyme (predicted ATPase) - Prom 144405 - 144464 5.2 - Term 144416 - 144469 5.4 144 88 Tu 1 . - CDS 144487 - 145326 961 ## COG0627 Predicted esterase - Prom 145348 - 145407 3.0 - Term 145399 - 145453 6.3 145 89 Tu 1 . - CDS 145535 - 145738 110 ## + Prom 146118 - 146177 3.8 146 90 Tu 1 . + CDS 146204 - 147913 2802 ## COG0442 Prolyl-tRNA synthetase + Term 147932 - 147983 19.0 - Term 147912 - 147978 22.8 147 91 Tu 1 . - CDS 148012 - 149364 1643 ## COG1686 D-alanyl-D-alanine carboxypeptidase - Prom 149457 - 149516 3.8 + Prom 149477 - 149536 3.4 148 92 Tu 1 . + CDS 149614 - 151143 1964 ## COG1171 Threonine dehydratase + Term 151158 - 151226 26.4 - Term 151154 - 151205 9.1 149 93 Tu 1 . - CDS 151218 - 151418 260 ## NMO_0837 hypothetical protein - Prom 151498 - 151557 4.2 + Prom 151457 - 151516 5.3 150 94 Op 1 8/0.000 + CDS 151540 - 152679 1401 ## COG2021 Homoserine acetyltransferase 151 94 Op 2 . + CDS 152676 - 153257 671 ## COG0500 SAM-dependent methyltransferases + Term 153273 - 153328 20.3 - Term 153268 - 153310 13.5 152 95 Tu 1 . - CDS 153341 - 153829 680 ## NMCC_1426 hypothetical protein - Prom 153890 - 153949 4.4 + Prom 154218 - 154277 3.4 153 96 Tu 1 . + CDS 154461 - 155465 1127 ## COG1816 Adenosine deaminase + Term 155547 - 155581 0.3 154 97 Tu 1 . - CDS 155481 - 155684 365 ## COG1942 Uncharacterized protein, 4-oxalocrotonate tautomerase homolog - Prom 155725 - 155784 5.1 + Prom 155761 - 155820 4.0 155 98 Tu 1 . + CDS 155873 - 156472 982 ## COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component + Term 156487 - 156527 12.2 - Term 156462 - 156521 7.1 156 99 Op 1 . - CDS 156536 - 157786 1923 ## COG0617 tRNA nucleotidyltransferase/poly(A) polymerase 157 99 Op 2 . - CDS 157844 - 159154 2242 ## COG4487 Uncharacterized protein conserved in bacteria - Prom 159178 - 159237 4.1 158 100 Tu 1 . - CDS 159285 - 161054 2539 ## COG4178 ABC-type uncharacterized transport system, permease and ATPase components - Prom 161277 - 161336 6.8 + Prom 161141 - 161200 8.0 159 101 Tu 1 . + CDS 161307 - 163538 2621 ## COG1629 Outer membrane receptor proteins, mostly Fe transport + Term 163559 - 163599 11.5 - Term 163547 - 163587 11.5 160 102 Op 1 . - CDS 163618 - 164649 632 ## COG2255 Holliday junction resolvasome, helicase subunit 161 102 Op 2 . - CDS 164668 - 164976 93 ## NGK_1117 hypothetical protein - Prom 164998 - 165057 4.0 + Prom 164848 - 164907 2.8 162 103 Tu 1 . + CDS 164968 - 165048 77 ## + Term 165092 - 165138 8.6 + Prom 165326 - 165385 6.9 163 104 Tu 1 . + CDS 165473 - 167464 1232 ## gi|298368824|ref|ZP_06980142.1| secreted protein + Term 167483 - 167525 8.1 + Prom 167511 - 167570 3.7 164 105 Tu 1 . + CDS 167639 - 169054 416 ## APJL_1741 hypothetical protein + Term 169159 - 169216 0.3 - Term 169148 - 169195 13.2 165 106 Tu 1 . - CDS 169217 - 169606 221 ## COG3445 Acid-induced glycyl radical enzyme - Prom 169739 - 169798 9.8 + Prom 169682 - 169741 6.6 166 107 Op 1 4/0.018 + CDS 169761 - 170915 414 ## COG4394 Uncharacterized protein conserved in bacteria 167 107 Op 2 . + CDS 170953 - 171513 836 ## COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) + Term 171533 - 171581 16.1 - Term 171525 - 171564 10.0 168 108 Tu 1 . - CDS 171589 - 172266 504 ## COG0036 Pentose-5-phosphate-3-epimerase - Prom 172381 - 172440 5.9 + Prom 172399 - 172458 9.1 169 109 Tu 1 . + CDS 172545 - 172976 225 ## COG3678 P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein + Term 172992 - 173033 10.0 - Term 172979 - 173020 10.0 170 110 Op 1 . - CDS 173025 - 173891 667 ## COG2607 Predicted ATPase (AAA+ superfamily) 171 110 Op 2 . - CDS 173893 - 174534 606 ## COG0307 Riboflavin synthase alpha chain - Prom 174568 - 174627 4.1 - Term 174583 - 174633 18.1 172 111 Op 1 16/0.000 - CDS 174702 - 174971 376 ## COG0776 Bacterial nucleoid DNA-binding protein - Prom 175048 - 175107 3.5 - Term 175000 - 175026 -1.0 173 111 Op 2 . - CDS 175162 - 177615 2867 ## COG0466 ATP-dependent Lon protease, bacterial type - Prom 177661 - 177720 3.9 + Prom 177620 - 177679 5.6 174 112 Op 1 6/0.000 + CDS 177855 - 178124 436 ## COG2921 Uncharacterized conserved protein 175 112 Op 2 13/0.000 + CDS 178128 - 178772 663 ## COG0321 Lipoate-protein ligase B + Prom 178805 - 178864 3.8 176 112 Op 3 . + CDS 178886 - 179884 1311 ## COG0320 Lipoate synthase + Term 179968 - 180004 3.2 - Term 179952 - 179994 7.1 177 113 Op 1 8/0.000 - CDS 180010 - 181224 1661 ## COG0304 3-oxoacyl-(acyl-carrier-protein) synthase 178 113 Op 2 . - CDS 181289 - 181816 768 ## COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases - Prom 181879 - 181938 6.2 - Term 182011 - 182055 13.1 179 114 Tu 1 . - CDS 182061 - 182876 640 ## COG1562 Phytoene/squalene synthetase - Prom 182979 - 183038 5.7 + Prom 182960 - 183019 5.6 180 115 Tu 1 . + CDS 183150 - 184961 1567 ## COG4232 Thiol:disulfide interchange protein + Term 184972 - 185026 15.8 - Term 185186 - 185238 18.3 181 116 Op 1 36/0.000 - CDS 185254 - 186135 1244 ## COG1177 ABC-type spermidine/putrescine transport system, permease component II 182 116 Op 2 30/0.000 - CDS 186135 - 187112 1149 ## COG1176 ABC-type spermidine/putrescine transport system, permease component I 183 116 Op 3 . - CDS 187132 - 188256 1280 ## COG3842 ABC-type spermidine/putrescine transport systems, ATPase components + Prom 188519 - 188578 5.9 184 117 Tu 1 . + CDS 188611 - 189288 649 ## COG2003 DNA repair proteins + Term 189295 - 189347 11.8 - Term 189281 - 189337 15.1 185 118 Tu 1 . - CDS 189369 - 190730 1581 ## COG0617 tRNA nucleotidyltransferase/poly(A) polymerase - Prom 190897 - 190956 4.9 + Prom 190895 - 190954 4.3 186 119 Op 1 . + CDS 190989 - 191174 444 ## NMO_1274 hypothetical protein 187 119 Op 2 2/0.200 + CDS 191196 - 191864 1159 ## COG4122 Predicted O-methyltransferase 188 119 Op 3 2/0.200 + CDS 191880 - 192557 981 ## COG1729 Uncharacterized protein conserved in bacteria + Term 192563 - 192612 11.0 189 120 Tu 1 . + CDS 192633 - 193118 833 ## COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase + Prom 193130 - 193189 3.1 190 121 Tu 1 . + CDS 193234 - 194292 1587 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair + Term 194299 - 194323 -0.3 191 122 Tu 1 . + CDS 194444 - 195175 977 ## COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes + Term 195212 - 195238 -0.6 - Term 195321 - 195364 8.5 192 123 Tu 1 . - CDS 195380 - 196042 867 ## COG3658 Cytochrome b - Prom 196107 - 196166 2.4 + Prom 196022 - 196081 4.2 193 124 Tu 1 . + CDS 196145 - 197032 390 ## PROTEIN SUPPORTED gi|90022317|ref|YP_528144.1| ribosomal protein S15 + Term 197046 - 197100 19.0 - Term 197028 - 197091 19.2 194 125 Op 1 2/0.200 - CDS 197100 - 197462 333 ## COG0239 Integral membrane protein possibly involved in chromosome condensation 195 125 Op 2 . - CDS 197499 - 197996 536 ## COG3235 Predicted membrane protein Predicted protein(s) >gi|289656362|gb|ADEA01000005.1| GENE 1 1 - 742 874 247 aa, chain - ## HITS:1 COG:Cj0606 KEGG:ns NR:ns ## COG: Cj0606 COG0845 # Protein_GI_number: 15791966 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Campylobacter jejuni # 45 203 41 198 390 83 34.0 3e-16 MSLNPMLLRLLMISPLLLTAACGGAPEDKKEEPLRVTVVRAAPADMAQTLRLSGTLSARE DIAVSTPLQGLKIVAVYADAGDTVKRGQVLAQLEDVNADSQLRQTEAQLARAKAQLRSQQ VAAAEAAATLKRYRPLAEADALSRQELDQQKSAAATAAANVEAAKADIAQLQAQLKDSRN QRGKTQIVAPADGVIAKRNAEAGALTGPDALFHIIKDGTVELAADAGADELPLLQNGARA QVSVRGR >gi|289656362|gb|ADEA01000005.1| GENE 2 1031 - 1822 1084 263 aa, chain - ## HITS:1 COG:YPO2155 KEGG:ns NR:ns ## COG: YPO2155 COG3713 # Protein_GI_number: 16122387 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein V # Organism: Yersinia pestis # 37 263 33 255 256 121 35.0 2e-27 MKHIVRTGVLSSLSLCLLHAPSVYAEDFRQEPQKTEFSVGVAGGYADSGYRGKSADWTVA PLVQLETKRFYIRGLSAGVKLYTSADQSQEVLLGATYLRDYGLKPSDSDDARLKRLDRRK NAVMADISYNLYSPYGNLETQVSHDVSGTNKGMQAQAQYSYFWQPTPKLLVKPAVGVSYS DKKFNRYYYGINADEARRSGLNAYQPKSSVHPYIGLETQYSFTPKFSAFAGVLAEALPST VKNSPMNDGKYRVEGTAGLMYRF >gi|289656362|gb|ADEA01000005.1| GENE 3 1959 - 2432 708 157 aa, chain + ## HITS:1 COG:NMB1585 KEGG:ns NR:ns ## COG: NMB1585 COG1846 # Protein_GI_number: 15677435 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Neisseria meningitidis MC58 # 14 133 4 123 143 79 33.0 4e-15 MENANSRFDPSQGIDQLGSLLTGIYDQYENWAKSKGLNYTVFAILYFVYYREHCTQSDIC AFWGFAKQTVSTQCNELLDKGILSIVQDDGNRRRKILTLTEQGRAYARPFVEPVRTAETA AFQSLGEELGRKLVEGTEKFYAALAAALTGSDKDKAV >gi|289656362|gb|ADEA01000005.1| GENE 4 2587 - 2715 118 42 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298368670|ref|ZP_06979988.1| ## NR: gi|298368670|ref|ZP_06979988.1| transcriptional regulator, LysR family [Neisseria sp. oral taxon 014 str. F0314] # 1 42 33 74 74 64 100.0 2e-09 MAGETAQTAGESPYTVNSIGMFARMAAHGSGVAFVPAMAAEK >gi|289656362|gb|ADEA01000005.1| GENE 5 2925 - 3884 1758 319 aa, chain - ## HITS:1 COG:NMB1220 KEGG:ns NR:ns ## COG: NMB1220 COG0330 # Protein_GI_number: 15677093 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Neisseria meningitidis MC58 # 7 319 3 315 315 494 85.0 1e-139 MELLYSFPFLILIAVIVFGFKSFIVVPQQEAYIVERLGRFHKILNPGLNILIPFIDRLAY KHTLKEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGSSNYIMAITQLAQTTLR SVIGRMELDKTFEERDEINSIVVAALDEAAVSWGVKVLRYEIKDLVPPQEILRAMQAQIT AEREKRARIAESEGRKIEQINLASGQREAEIQQSEGEAQAAINASNGEKVARINRAQGEA EALRLVAEANADAIRQIATALQTPGGNEAVNLKVAEQYVAAFSNLAKEGNTLIMPANVAE IGSLVAAGLKIVEGNKAAK >gi|289656362|gb|ADEA01000005.1| GENE 6 3905 - 4318 599 137 aa, chain - ## HITS:1 COG:no KEGG:NMB1221 NR:ns ## KEGG: NMB1221 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis # Pathway: not_defined # 1 134 1 132 135 129 54.0 4e-29 MTIWFIAAAAVLIVELFTGTVYLLVVSAALFGAGLADRLTDSTGISIMTAAVLSALGIWL VHGKLKQRSRLRAQEAAADDLDIGQSVQVVRHLHGDMYEVSYRGTRWQAQASQQPVQTAS TAVITGKNGNILLIQPH >gi|289656362|gb|ADEA01000005.1| GENE 7 4538 - 5074 721 178 aa, chain + ## HITS:1 COG:no KEGG:NMB1470 NR:ns ## KEGG: NMB1470 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis # Pathway: not_defined # 6 177 8 180 181 209 59.0 5e-53 MKKIPVLMLAVLLAACGGKSDTAASQADTGLPPKPSFKVKFIDSTVTQGLPLGKASEDKT NDGKKRLSYAIEGMDAQNVLEVIGNRPEDLEVVSGRCMQTDGQGGKIGWTRDGRCRALFA KLVANVADDADKLTDYLVVHAGLLPYQAGRSGYAAVQNGRYILELDSDGLFFFRRRNI >gi|289656362|gb|ADEA01000005.1| GENE 8 5162 - 6076 1099 304 aa, chain - ## HITS:1 COG:no KEGG:CV_0489 NR:ns ## KEGG: CV_0489 # Name: not_defined # Def: hypothetical protein # Organism: C.violaceum # Pathway: not_defined # 37 278 36 272 293 169 49.0 1e-40 MHSNKSQSDRNATTGRRKLRHERLHHPPFWQADRPYLHEHHISDARFRRLGYIMALLAGA INAGGFFAFARYTSHVTGSMSLLADTLYLHQWTTAAVALVSVFCFVAGAAHSGWVILWTQ QKRFRGSFGFSMWLEALYLLVFGLFGITALQWDFGKADVIIPSLALFLLCFIMGMHNTVI TLLSGGAIRSTHMTGSATDLGIEISRALYYSRTHHPHLPHVHVNKPKMWLLSGLMWAFLL GGVIGAWGYHKIGHHFALPVAAVLFILGAGSVGYDVKLRLKFALVRWYQRKQALKRHTDG KNGS >gi|289656362|gb|ADEA01000005.1| GENE 9 6206 - 7156 1217 316 aa, chain - ## HITS:1 COG:NMB1367 KEGG:ns NR:ns ## COG: NMB1367 COG1092 # Protein_GI_number: 15677232 # Func_class: R General function prediction only # Function: Predicted SAM-dependent methyltransferases # Organism: Neisseria meningitidis MC58 # 1 314 40 353 354 598 92.0 1e-171 MTDITPFANRMGKNIKHLMKWAKRNGIEAWRIYDRDIPQFPFAVDVYGDQIHLQEYDTGW LMQPEEYESWLAEVLEAVAFVTGFAPEQIHLKRRERQKGLQQYEKTGKTGDDFVITENGR KFWVNLDKYLDTGLFLDHRNTRKKVGETAAGKRFLNLFSYTGSFTVYAASGGAASSETVD LSNTYLDWAKRNFELNGISPEQHKIVRADVFQYLQNAAAEGKQFDLIVMDPPSFSNSKKM PGILDIQRDHPKLIAGAMNLLASDGILYFSNNLRSFVLDDSVSEQYAVKDISKQSVPDDF RNKKIHQCWEIRHKPS >gi|289656362|gb|ADEA01000005.1| GENE 10 7494 - 8825 1758 443 aa, chain + ## HITS:1 COG:NMB1368 KEGG:ns NR:ns ## COG: NMB1368 COG0513 # Protein_GI_number: 15677233 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Neisseria meningitidis MC58 # 1 432 1 455 462 764 88.0 0 MSIKFADLNLDKNILSAVRSEGYESPTPIQAQAIPFALEGRDIMASAQTGSGKTAAFLLP TLQRLTKRSEKPGKGPRALVLTPTRELAAQVEKNALAYAKNMRWFRTVSIVGGASFGYQT RALSKPVDLIVATPGRLMDLMQSGKVDFDRLEVLILDEADRMLDMGFIDDIETIVEATPS DRQTLLFSATWDGAVGKLARKLTKNPEIIEVERVDDQGKIEEQLLYCDDMRHKNRLLDHI LRDANIDQCVIFTSTKAMTEVIADDLYEKGFAANCLHGDMPQGWRNRTLMDLRKGRCKIL VATDVAARGIDVPTITHVINYDLPKQAEDYVHRIGRTGRAGRTGIAITFAEVNEYVKVHK IEKYIDRKLTELTVEGMEPTRKRKSAGGKPKGKGGWGDGKKTGFKAKGGGFKKGGEGFKA KCKSGGGSGGKGGFGKASRPAKR >gi|289656362|gb|ADEA01000005.1| GENE 11 8936 - 9541 969 201 aa, chain - ## HITS:1 COG:AGc4093 KEGG:ns NR:ns ## COG: AGc4093 COG0494 # Protein_GI_number: 15889527 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 36 194 50 208 210 114 38.0 1e-25 MMNQTELAGFLSRAALYPCEEEKLRNQIFAADGYTEAAVLLPVVFHERQWQIILTRRSAN LRRHTGQISFAGGKKEPHDVTPAQTALREAEEEIGTHPAVWQTFPALPPHYSPSGYEVRP VPALNAGSPNLTANPDEVAEIIYLPLETALNPQNYRPRTLQYRGQTIRPPALPYLHHDIW GLTAMILYGLAERYRHHMAQR >gi|289656362|gb|ADEA01000005.1| GENE 12 9693 - 11567 2567 624 aa, chain + ## HITS:1 COG:NMB0872 KEGG:ns NR:ns ## COG: NMB0872 COG0457 # Protein_GI_number: 15676768 # Func_class: R General function prediction only # Function: FOG: TPR repeat # Organism: Neisseria meningitidis MC58 # 7 624 5 614 614 566 50.0 1e-161 MFFANARIRSVAAAVLMLFTATACASNDSVAKIKTPQDIKKIVQKKSRYTPEEREVEQRR RMGVIERANTVFTLLGGEMALQKGDAGTALATYMVTLERTKDPVVAERALEMAVSLNAFE PAEMIYQKWRQIEPVPGEAQKRMGWVRNLMMGRADKSLKGLDEILSRAEEEHAKQIFLLL SQAAVQQPDLAAKGASQVHKAAQKYPDMPEASIADAIYSAQSGSDRHAVSALQNLAKLDS EILPPTALTLRLVAQRNPEILSRFFRDTDSKKLSSVWQELEIATLIANKQQDKAYKRLHE LLADNPNADLYIQAAYLAGSRREDISVVNGYLEKAYRTGTDEQKSRAAVIGAMGYGDKRE FKKAERWVNRITSPEYVFDKAVLKASLQAEQGNGKAALAEARKAQKLPEQQGRFFGSSDL QRAYLFALSKHGNAQEVLSELNALAAKAAKKPDADKLLPDILYQRALVYADLLHQPDKAI ADLRRYLKLNPNSAAGMNALGYTMLISRQSGISDTDEAFKLIQTAYNLDPESPAINDSMG WAYYRKGDAQTALPYLQYAFGRYPDSEVAAHLGEVLWQLGQKEEAKKVWFDSLAKGGDVA VLKKTMRRFGVALPASKPAKKPAK >gi|289656362|gb|ADEA01000005.1| GENE 13 11632 - 12219 679 195 aa, chain + ## HITS:1 COG:NMB0873 KEGG:ns NR:ns ## COG: NMB0873 COG3017 # Protein_GI_number: 15676769 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane lipoprotein involved in outer membrane biogenesis # Organism: Neisseria meningitidis MC58 # 7 195 5 193 193 217 55.0 9e-57 MKFKLWLSAAAVTVLAACSQPKLPEQADWSESVQVPDFTADGRLSVKVEEKGSYANFDWT YQNQVQTISINTPLGSTLGQLCQDGEGVLAVDSKGKKYQAPTAEELSGRLLGYNLPVQYL HIWANGKRVAGAPYQIDSEGRLQQFQWTISRTLKSDGKPRVLLLESPKLTLRLVFDEMNF AKDASAPKQCAARFR >gi|289656362|gb|ADEA01000005.1| GENE 14 12230 - 13075 538 281 aa, chain + ## HITS:1 COG:NMA1092 KEGG:ns NR:ns ## COG: NMA1092 COG1947 # Protein_GI_number: 15794040 # Func_class: I Lipid transport and metabolism # Function: 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase # Organism: Neisseria meningitidis Z2491 # 1 279 1 279 281 426 70.0 1e-119 MKIPSRAQAFPAPAKLNLDLRITGRRKDGYHNLESIFCLVGLYDTVYLAAREDAQIVLHT PVEGISAEQDLTYRAAKALQTYTRCGKGADIWLDKRIPTGGGLGGGSSDAATVLIALNSL WQCRLNRRELIDLGLKLGADVPFFIFGRNAFAKGIGEQLTETDIPKQWYVIVRPPVHVAT AKIFSHKDLTRNSEPSIIPSFQMLRPFRNDMQAVVFQEYPEVRDAYLELSKYGEALMTGS GSCVFLACDGLDKAENIYRQVSELYEAYCVEGLDIHPLLHM >gi|289656362|gb|ADEA01000005.1| GENE 15 13396 - 13557 63 53 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQQMLRNRQIMFDSIIPLVMDTIRPNGFDFSEFPNIRNIKIKKFPQLCGIMII >gi|289656362|gb|ADEA01000005.1| GENE 16 13671 - 14012 229 113 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298368681|ref|ZP_06979999.1| ## NR: gi|298368681|ref|ZP_06979999.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 113 1 113 113 186 100.0 4e-46 MKLTSKLFFALTTAAVLAACGNSQNPNEESNHSGVQPAAAQIGTGTLHEACKAYLDRRAT CFAKKDKKRLAEHKAEYGNIVRSFSSLPADEQVRQCMSANQSFDDIAKELKCE >gi|289656362|gb|ADEA01000005.1| GENE 17 14080 - 15489 1573 469 aa, chain - ## HITS:1 COG:NMB1156_2 KEGG:ns NR:ns ## COG: NMB1156_2 COG0007 # Protein_GI_number: 15677032 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III methylase # Organism: Neisseria meningitidis MC58 # 215 455 8 248 274 306 66.0 5e-83 MSHYPIFADLCGRPVLLAGAGHIAERKAESLLQAGAEVRVVADALNPAFQTWLNQGKITW LSTGFHDFYLDDVFLAVAATDDHKLNRRVYEAAEARGKLCNTVDNAELCSFIVPAVIDRN PIKIAISSGGTSPVLARKWRQIIETLVPLHTGKMAQTAGRWRNRVKAAIHGTEQRRRFWE NLFESRFSTLTAQGSHKEAEAELAAQLAGYRPSRGEVALVGAGPGDAGLLTIHALQAIQA ADVVLYDALVSDEIMAAVRKDAEKISVGKRAGAHHVQQEETNRLLVRYAREGRRVVRLKG GDPFVFGRGGEEAQVLRQAKIPYRIIPGVTAALGATAYAGIPLTHRDCAQSALFVTGHSR HDGSEPDWHTLALSRQTLVVYMGTLKAVEITAQLIRHGRSENTPVAVISNGTLPNQTVRT GRLKDLPDIAEKAPRPALMVIGEVAALRDELTWFGGHQVETAAELAEAV >gi|289656362|gb|ADEA01000005.1| GENE 18 15764 - 18829 4019 1021 aa, chain + ## HITS:1 COG:NMA1788 KEGG:ns NR:ns ## COG: NMA1788 COG0013 # Protein_GI_number: 15794680 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Alanyl-tRNA synthetase # Organism: Neisseria meningitidis Z2491 # 1 383 1 383 874 764 93.0 0 MKTSELRQKFLKFFESKGHTIVRSSSLVPHDDPTLLFTNAGMNQFKDVFLGFDKRAYSRA TTAQKCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKRDAIHFAWEFLTSPEWLN IPKEKLLATVYAEDDEAYNIWLNEIGMPAERIVRIGDNKGAKYASDNFWQMGDTGPCGPC SEIFYDHGEEIWGGIPGSPEEDGDRWIEIWNCVFMQFNRDEQGNMNPLPKPSVDTGMGLE RMAAVMQHVHSNYEIDLFQDLLKAVARETGAPFSMDEPSLKVIADHIRSCSFLISDGVMP SNEGRGYVLRRIIRRAVRHGYKLGQKQAFFYKLVPDLVKAMGDAYPELKEKQAQIEEALK NEESRFGQTLETGLKLFDDELSKVQFNALCKHVSENAYSNETMSVSSALNTNGHWELLFT PISSKITPLKFNYENWRNAEQYLKENKNQITVDKNILIDGFKGAAAGAIGALFVNAVFGT KISLGTAAATGGALNTGAGYLEKNQLESERDDFINALELLIPQLVECGNTQKTTLAGETI FKLYDTYGFPYDLTADMARELGIDLDEEGFNREMEAQRARARAAQNFKANAQLDYTGADT EFTGYEKRSQETKIIALYKGSEAVDELQAGEAGVVVLEQTPFYAESGGQVGDVGFIFAGE NRFRVEDTQKIKAAVHGQFGAVVSGRLKVGDAVSAEIDNDIRDSIMRNHSVTHLMHKALR DVLGTHVEQKGSLQNAELTRFDISHPQGISAEEIAEVERRVNAAIIANVPVKVETMSIED AQKSGAMMLFGEKYGDFVRVITMGDYSTELCGGTHVARTGDIGFFKIISEGGIAAGIRRV EAITGLAALAWAQNQESLMKNIIAEVKAQTEKDVLAKIQANAANTKALEKELAKAKAELA VHAGAKLLDSAKDLGAAKLVASQIEADAAALREIVTDLTGKSDNAVILLAAVNDGKVSLC AGVSKPLTNKVKAGDLVKFAAEQVGGKGGGRPDLAQAGGTDAVKLPEMLGSVEGWVSRKL V >gi|289656362|gb|ADEA01000005.1| GENE 19 18927 - 19754 361 275 aa, chain + ## HITS:1 COG:NMB1295 KEGG:ns NR:ns ## COG: NMB1295 COG0266 # Protein_GI_number: 15677162 # Func_class: L Replication, recombination and repair # Function: Formamidopyrimidine-DNA glycosylase # Organism: Neisseria meningitidis MC58 # 1 275 1 275 275 441 74.0 1e-124 MPELPEVETTLRGVGPHITGKAVSGVILRQSKLRWPVNPDLPQILQGLLVEECSRRAKYL IIRFQTGVLLIHLGMSGSLRVFTMGDDRIGKPDKHDHIDIEFSDGTVLRYHDPRKFGAFL WFEGIAEYHPLLAKLGPEPLSDEFDADYLYRKMKVLKRTVKLVLMDNAVVVGVGNIYANE SLFKAGIVPHRPAYMLSRQECTTLVETVKTVLKRAIETGGSTLRDFVNSDGQSGYFQQEY AVYGRQGKPCVKCGRPILKEVLGQRGTFYCSHCQK >gi|289656362|gb|ADEA01000005.1| GENE 20 19822 - 20586 372 254 aa, chain + ## HITS:1 COG:NMB1294 KEGG:ns NR:ns ## COG: NMB1294 COG0204 # Protein_GI_number: 15677161 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Neisseria meningitidis MC58 # 1 253 1 250 255 323 64.0 2e-88 MSQQKATIATRFRRLGRLACWLWRTGRDLNSLNGSNSEERNRVLVKLGKGALEALDIELE AGIQPEHGDSCGTLVVANHVSWLDIFAISSVYPCSFIAKQEIGSWPVLGRMGKNAGTVFI NRNSRRDIEPINQAICEALKAGQNVSFFPEARTSSGLDVLPFKAALFQSAMDADAPIQVL ALRYYDGDGRRSSIPSYADVSLPTSLWRIVSMKKIRITLDFAPLFKTAEFPDKDRYGLKD VAEAFVRKKVAEDI >gi|289656362|gb|ADEA01000005.1| GENE 21 20778 - 21515 1112 245 aa, chain + ## HITS:1 COG:NMB0946_1 KEGG:ns NR:ns ## COG: NMB0946_1 COG0678 # Protein_GI_number: 15676839 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Neisseria meningitidis MC58 # 1 172 1 172 172 353 98.0 1e-97 MALQDRTGQKVPSVVFRTRVGDTWKDVSTDDLFKGKKVVVFSLPGAFTPTCSSSHLPRYN ELFGAFKENGVDAIYCVSVNDTFVMNAWAAEEESDNIYMIPDGNGEFTEGMGMLVGKEDL GFGKRSWRYSMLVNDGVVEKMFIEPEEPGDPFKVSDADTMLKFIAPDWKAQESVAIFTKP GCQFCAKAKKALQDKGLSYEEIVLGKDATVTSVRAITGKMTAPQVFIGGKYIGGSEDLEA YLAKN >gi|289656362|gb|ADEA01000005.1| GENE 22 21931 - 23337 328 468 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 7 461 5 451 458 130 25 3e-29 MKKIQADVVVIGGGTAGMGAFRNARLHSDNVYLIENNVFGTTCARVGCMPSKLLIAAAEA RHHALHTDPFGVHLDKDSIVVNGEEVMQRVKSERDRFVGFVVADVEEWPADKRIMGSAEF IDENTVQIDDHTQITAKSFVIATGSRPVILPQWQSLGDRLIINDDVFSWDTLPKSVAVFG PGVIGLELGQALHRLGVKVEIFGLGGIIGGISDPVVSDEAKAVFGEELKLHLDAKTEVKL DADGNVEVHWEQDGEKGVFVAEYMLAAVGRRPNVDNIGLENINIEKDARGVPVADPLTMQ TSIPHIFIAGDASNQLPLLHEAADQGKIAGDNAGRYPNIGGGLRRSTIGVVFTNPQIGFV GLKYAQVAAQYQPDEFVIGEVSFKNQGRSRVMLVNKGHMRLYAEKATGRFIGAEILGPAA EHLAHLLAWAHQMKMTVEQMLDMPFYHPVIEEGLRTALRDADAKLKQA >gi|289656362|gb|ADEA01000005.1| GENE 23 23428 - 24372 1003 314 aa, chain - ## HITS:1 COG:NMA1783 KEGG:ns NR:ns ## COG: NMA1783 COG2207 # Protein_GI_number: 15794676 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Neisseria meningitidis Z2491 # 1 299 1 296 301 332 56.0 6e-91 MDTLDKLIELAQITGSVDIQCLFRDKWYAPHGRRRAHGIAHLVVAGESYIKIEGEPEARL LKTGDLIFFPRSAEHIISSEADCNNCGDTPHIGNGGAFTVASSGSGGEKSLDLFCARFEY DEHADIMHDLPETVLIKMDHPSLQCLVSMLQYESAHTLSGSRAIVNALSSVLLVLIVRAH LEQGGGAPLGGILNGLRDKRLRQLIQTVVSRPEDEWNIEKMTALANLSRAQLMRLFKQQT GISPHAFVNLIRLRQAAVLLRQTADSVLSVALNVGFQSETHFGKAFKKQYGISPGQYRKH VETDETAIKSFDGV >gi|289656362|gb|ADEA01000005.1| GENE 24 24502 - 24837 661 111 aa, chain + ## HITS:1 COG:NMA1782 KEGG:ns NR:ns ## COG: NMA1782 COG0599 # Protein_GI_number: 15794675 # Func_class: S Function unknown # Function: Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit # Organism: Neisseria meningitidis Z2491 # 1 111 1 111 111 122 90.0 1e-28 MFQNWPEHTAHVKKSFGELGKNHPKMLQAYGALEQAAAAEALDAKTRELIAIAVAITTRC ESCISVHAAAAAKAGATESEIAGALATAISLNAGAAYTYALRALEAVDAQR >gi|289656362|gb|ADEA01000005.1| GENE 25 24967 - 25335 572 122 aa, chain + ## HITS:1 COG:NMA0994 KEGG:ns NR:ns ## COG: NMA0994 COG0607 # Protein_GI_number: 15793951 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Neisseria meningitidis Z2491 # 31 122 28 119 119 136 70.0 1e-32 MRKLLTVVCLAAAFAVPVAAQAAAAKPAEKTAAQPAKAKGIWIDVRTPEEFKEGHLKDAV NIPVDQIGARIGSVSPDKSAPVNLYCRSGRRSEAALQELKKMGYTNVTNHGGYQDLLQKG LK >gi|289656362|gb|ADEA01000005.1| GENE 26 25408 - 25899 599 163 aa, chain + ## HITS:1 COG:NMB0783 KEGG:ns NR:ns ## COG: NMB0783 COG3439 # Protein_GI_number: 15676681 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis MC58 # 5 163 2 159 159 192 67.0 2e-49 MKMPRTLLPLFAAAVLAGCAHVPQTASEPSVNKGQDMSYTQSVVSKYSFDETVSRLEHAV KAKGMTVFAVIDHQAAAKQSGLSMQPAKVIVFGTPKAGTPLMVKDPEFALQLPLKVLVTE TGGEVKAVFNDTRQLIRGSRIGYGEVENTLANAETLIRKTVGE >gi|289656362|gb|ADEA01000005.1| GENE 27 26028 - 26741 863 237 aa, chain + ## HITS:1 COG:NMA1542 KEGG:ns NR:ns ## COG: NMA1542 COG0220 # Protein_GI_number: 15794435 # Func_class: R General function prediction only # Function: Predicted S-adenosylmethionine-dependent methyltransferase # Organism: Neisseria meningitidis Z2491 # 1 237 1 238 238 394 80.0 1e-110 MTEQQHDEKNPVPEEHKRSIRSFVLRQGHMTAAQQRAIDTLWPRFGIDYCRQTVDLNACF GRSNPKVLEIGFGMGTATAEIAKRLPDTDFLAVDVHGPGVGNLLKLIEEGHLGNIRVMRH DAVEVVEDMLADASLDGIHIFFPDPWHKKRHNKRRLVQAPFVAKLLPKLKSGGYIHMATD WEEYAAQMLEVLGGFAELQNTADGYAPTPDYRPETKFEARGKRLGHGVWDLVFKKIG >gi|289656362|gb|ADEA01000005.1| GENE 28 26828 - 27913 1557 361 aa, chain + ## HITS:1 COG:CAC3027 KEGG:ns NR:ns ## COG: CAC3027 COG1408 # Protein_GI_number: 15896279 # Func_class: R General function prediction only # Function: Predicted phosphohydrolases # Organism: Clostridium acetobutylicum # 39 359 57 387 392 146 27.0 5e-35 MNIGVFIAVVALLQVFTFGLGRSLQWLFAPVIGGKGRRWLMAAAFFVTDGLLAGLLLQLG HFVFRIMAFWMVIMLFVMYAALATFLLYLLLRKVLPQLHLSRSLRLFAPLFVAGLLGLGV YNAYTPVVHRQTVTIDKKLDKPLRIGMASDMHLGILFGGRSLDRLAEIMRQEKADIILLP GDLMDDNVEAYRKENMQPHLAKLRAPLGVYATLGNHDLFGDQKEIYEEVTKAGIRVLTNE AVETDNLLIVGRNDDLDSSRPSTAQLLNGKNTNLPVLLLDHRPTEIDIHRHLPVDIQVSG HVHNGQVAPANLIVRALYRLHYGYRQFGKGHFFVTSGYGFWGIPLRLGSQSEVWIIDVKG R >gi|289656362|gb|ADEA01000005.1| GENE 29 27998 - 29626 2792 542 aa, chain - ## HITS:1 COG:NMA1409 KEGG:ns NR:ns ## COG: NMA1409 COG0488 # Protein_GI_number: 15794321 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Neisseria meningitidis Z2491 # 1 542 1 542 542 1044 97.0 0 MISTNGITMQFGAKPLFENVSVKFGEGNRYGLIGANGSGKSTFMKILGGDLEQTAGEVAI ENGVRLGKLRQDQFAYEDMRVLDVVMMGHTEMWAAMTERDAIYANLEATEDDYMKAAELE AKFAEYDGYTAEARAAELLSGVGISEDLHNATMAEVAPGFKLRVLLAQALFSKPDVLLLD EPTNNLDINTIRWLEGVLNQYDSTMIIISHDRHFLNEVCTHMADLDYNTITIYPGNYDDY MLASAQSRERALKDNAKAKEKLQELQEFVARFSANKSKARQATSRLKQADKIKAEMVEVK PSTRQNPYIRFEADEKAKLHRQAVEVENLAKRFETQLFKNLSFILEAGQRLAIIGPNGAG KSTLLKLLAGAFNPEYSDGLTPDTGTIKWAEKASVGYYPQDHENDFDVDMNLSEWMRQWG QEGDDEQVIRGTLGRLLFGSNDVVKKVQVLSGGEKGRMLYGKLLLLKPNVLIMDEPTNHM DMESIESLNMALEKYNGTLIFVSHDRQFVSSLATQIIELDGKGGYEHYLGDYESYLEKKG LA >gi|289656362|gb|ADEA01000005.1| GENE 30 29751 - 29945 169 64 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298368694|ref|ZP_06980012.1| ## NR: gi|298368694|ref|ZP_06980012.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 64 1 64 64 94 100.0 2e-18 MEPEKIYYAVVVLVCAASMLLSPFFYVRRTRAVTPVRHRRQWKVIAVSNLLMIAVLLFVW WKWL >gi|289656362|gb|ADEA01000005.1| GENE 31 29962 - 30411 567 149 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298368696|ref|ZP_06980014.1| ## NR: gi|298368696|ref|ZP_06980014.1| lipoic acid synthetase [Neisseria sp. oral taxon 014 str. F0314] # 1 149 1 149 149 199 100.0 4e-50 MNTIKILTALLATLPLFATAAPIYECTDGSGHKIYTQDKGKNCKASNLGKASVYTSAPVY SAPQQSQTAADNAPPPPAADSAALQAAQNELEQAQKNLEDGKKVRYGNERNYARYLDRVQ NLENAVKAAEQKVNSAKIGNSSLARPMMH >gi|289656362|gb|ADEA01000005.1| GENE 32 30496 - 31422 1534 308 aa, chain - ## HITS:1 COG:NMA1588 KEGG:ns NR:ns ## COG: NMA1588 COG0130 # Protein_GI_number: 15794481 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridine synthase # Organism: Neisseria meningitidis Z2491 # 1 301 1 301 306 515 87.0 1e-146 MTAKLAKRPVNGVLLLDKPEGLSSNTALQKARRLYNAEKAGHTGVLDPLATGLLPVCFGE ATKFAQYLLDADKAYTATLKLGEASSTGDAEGEIIATARADISLAEFQTACQALTGNIRQ VPPMFSALKHEGKPLYEYARKGIVIERKPRDITIYAIDITEFDAPKAVIDVRCSKGTYIR TLSEDIAKHIGTFAHLTALRRTETAGFTIRESHTLETLAALDETERNALLLPCDVLVRHL PKIELNDRAVTMLKCGQRPQFTEDISADQPIRVYDHSGAFIGLAEYQKEIGRLKALRLMN TDNGKRLQ >gi|289656362|gb|ADEA01000005.1| GENE 33 31424 - 31834 158 136 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298368698|ref|ZP_06980016.1| ## NR: gi|298368698|ref|ZP_06980016.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 136 1 136 136 268 100.0 7e-71 MTFPEFLLSLVFFSYCACYAFSLRKGKTVFDTASGNEIHIGKNGHYSVWHDGDGQISFRI TDLNGREAPLSKPLFHASFRRTDGRITLLKQGRLKKGSYTVETSNPHSHIILRKTISETP IILLGTSILSLSFLLH >gi|289656362|gb|ADEA01000005.1| GENE 34 31917 - 32288 747 123 aa, chain - ## HITS:1 COG:NMB1373 KEGG:ns NR:ns ## COG: NMB1373 COG0858 # Protein_GI_number: 15677238 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-binding factor A # Organism: Neisseria meningitidis MC58 # 1 123 1 123 123 196 88.0 1e-50 MRKPQRGYARQDRVKEQIMRELAELVRTGLKDPRAGFITINEVEVTRDYSHATVFYTVLD DSTRDITEEALEHAKGHLRSELAKRIKLFKTPELHFKYDESLERGMSISSLIDQVAAEKL VED >gi|289656362|gb|ADEA01000005.1| GENE 35 32407 - 33447 1094 346 aa, chain + ## HITS:1 COG:PM0652 KEGG:ns NR:ns ## COG: PM0652 COG0673 # Protein_GI_number: 15602517 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Pasteurella multocida # 4 344 5 345 350 420 57.0 1e-117 MQKIKIGLAGFGMSAQVFHLPFWRADARFEVVRVFERSGNKAQAVLPQAQTVRSFEELLT DDVDLVVITTPNQTHFDFAAQALRAGKNVVVEKPLCVTAAQALELAELAERQGVLLTVYQ NRRWDSAPLTAKKLLSDDLLGEIVDAEFRFERYAAALNKKRWKETGEAGVGLVYDLGSHL MDMAVDVFGMPDELYADVRYQHEGAASDDNFYIALYYADGKKVALTASKYAREPLPFMTL HGKRGSYVKQNADNQEALLLGGAQPVGVWNREPEDEWGILHTEIDGVVVRKKIESVSGNY AAFYENLYDALQGKSPAAVQPRQVAEVLWLLEKVYESAKSGCRVKV >gi|289656362|gb|ADEA01000005.1| GENE 36 33779 - 34825 1770 348 aa, chain - ## HITS:1 COG:NMB1445 KEGG:ns NR:ns ## COG: NMB1445 COG0468 # Protein_GI_number: 15677302 # Func_class: L Replication, recombination and repair # Function: RecA/RadA recombinase # Organism: Neisseria meningitidis MC58 # 1 348 1 348 348 610 90.0 1e-174 MSDEKSKALAAALAQIEKNFGKGSIMKMDGSQQEENLDVISTGSLGVDLALGVGGLPRGR VVEIFGPESSGKTTLCLEAIAQCQKNGGICAFIDAEHAFDPIYARKLGVKVEELYLSQPD TGEQALEICDTLVRSGGVDMVVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTG HIKRTNTLVVFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGQIKKGDDVIGN ETKVKVIKNKVAPPFRQAEFDILYGEGVSWEGELIDLGVKYDIVEKSGAWYSYNGAKIGQ GKDNVRVWLKENPEIANEIDAKIRAAVGINVDITEGKLDDTDGERPEE >gi|289656362|gb|ADEA01000005.1| GENE 37 34985 - 35710 809 241 aa, chain - ## HITS:1 COG:NMA1129 KEGG:ns NR:ns ## COG: NMA1129 COG0590 # Protein_GI_number: 15794075 # Func_class: F Nucleotide transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: Cytosine/adenosine deaminases # Organism: Neisseria meningitidis Z2491 # 92 238 1 147 148 206 69.0 3e-53 MLTTPPLTPGVLATLQDLGITTRQDLRQIGAIKTFLLLKAAGRTITRSTLWQLEALSHGI RPQDLSEAEKTALLKQLADHPPVAVFPRPSEMEIFMRIALEQAVQSAAAGEIPVGAAVVK NGSVIAAAHNTCIQSRDVSRHAEISALAQAGAVLGNYRLDGCDVYVTLEPCAMCASALIQ ARVARVIFGADEPKTGAAGSIIDLFAAHGINKHTAVTGGILKKECRTLLQQFFREKRRFQ P >gi|289656362|gb|ADEA01000005.1| GENE 38 35819 - 36760 1188 313 aa, chain - ## HITS:1 COG:NMA1130 KEGG:ns NR:ns ## COG: NMA1130 COG0324 # Protein_GI_number: 15794076 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA delta(2)-isopentenylpyrophosphate transferase # Organism: Neisseria meningitidis Z2491 # 1 313 1 313 313 403 66.0 1e-112 MNAPKAFAILGPTAGGKTGLALDIAAKLPVEIISLDSALVYRDMDIGTAKPSAAERQAVP HHLIDIITPLETYSAADFVADCVRLVADIHRRGRLPLIVGGTMMYFQALSGGLNNLPEAD PAVRAALQAEKNAHGLARLYRRLQAADPVTAARLKPNDSQRIERALEVFELTGKPLSRHF DEQQTTPPPLDLHTIALIPENRALLHARIAERFGQMLRQGFLDEMAALRRKYPALTAGHT SMRCVGYRQAWDYIEGGYGHETFVEKGTAATRQLAKRQLTWLRKIPLAQSLDPFTAQNYL QTASESVKRHFGI >gi|289656362|gb|ADEA01000005.1| GENE 39 36846 - 38360 2224 504 aa, chain - ## HITS:1 COG:RSp1337 KEGG:ns NR:ns ## COG: RSp1337 COG4262 # Protein_GI_number: 17549556 # Func_class: R General function prediction only # Function: Predicted spermidine synthase with an N-terminal membrane domain # Organism: Ralstonia solanacearum # 3 504 4 510 510 595 60.0 1e-170 MTANRTLIISVFIVASCGLAYELIIAALASYLLGDSILQFSSVIGLYLFSMGIGAHLTRY IKDEDVLHRFIEIELLVGIIGGISALALFVAFGLSAAPFRTLLYAFVLIVGAVVGMEIPL VMRVLNRKGAEFKELVAKVLTFDYLGALAVSLLFPLLLAPKLGMARSALLFGILNAAVAY LTARVFKAELPRYRAIRLRALIVLSVLAAAFAYADRISFKAEQSYFGDPVVYQSHSPYQR LVVTRWKDDTRLYINGNLQFSSRDEARYHEALVLPAMQMVQNATRILILGGGDGLAAREV LKYPQVKHVTLVDLDPDMTATFKTSATLSALNQGSLSHPKMHVVNDDAAKWLEGSSEKFD VIIIDLPDPSNFSLGKLYSVPMYRLVARHLQPQGKIVVQSTSPYFAPNAYWSVVATLEAA GLSTAPYHVYVPSFGEWGFVLAGFDKQFPVPQKFDVPTRYLNAQTAAEMFRFPPDMARRK VKPNYLNNQILVSYFESDWRNAIR >gi|289656362|gb|ADEA01000005.1| GENE 40 38488 - 38886 516 132 aa, chain + ## HITS:1 COG:STM4374 KEGG:ns NR:ns ## COG: STM4374 COG3766 # Protein_GI_number: 16767620 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 5 132 4 131 132 85 40.0 2e-17 MSISLPQYLLYLQYMLAGVAMTAVFGAVYLRITPAEELRLIKNGNLACALSFGGALVGFC LTLASSIAHSVSFVDFILWGLAAAVIQILVYFVATMMIKGATEELIGNNVAVGALFGAVS VSIGILNAACLT >gi|289656362|gb|ADEA01000005.1| GENE 41 39137 - 39961 757 274 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298368706|ref|ZP_06980024.1| ## NR: gi|298368706|ref|ZP_06980024.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 274 1 274 274 518 100.0 1e-145 MQNTIRFCFAALSLSAAVGAQAARPLEFTVGTEYYNETYREYEGSERMMQQTGNLWSLTG GVKYRFNDRHAAKVEGRYSRGKSDYIGSVIDVDGNAYSYGSATLNGAPRRAYDIRALYEY THPINDRFSVTAGAGLGHRVLRDLSSRADATDYDRKNQTTYAQINAGVNIALPANFEVSP RIAYNHALRGRQYSYHPGREATEMKQSGGRGVEIEVPVSKKFANESKISIAPFYRGWKVK KSDMAIVYLPQGVYGATEPKNYTHEAGVKVQYSF >gi|289656362|gb|ADEA01000005.1| GENE 42 40170 - 40292 105 40 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAMFVDEGATEELIGNNVAVGALFGAVSVSIGILNAACLT >gi|289656362|gb|ADEA01000005.1| GENE 43 40379 - 41401 1384 340 aa, chain + ## HITS:1 COG:RSp1296 KEGG:ns NR:ns ## COG: RSp1296 COG4260 # Protein_GI_number: 17549515 # Func_class: S Function unknown # Function: Putative virion core protein (lumpy skin disease virus) # Organism: Ralstonia solanacearum # 3 340 5 340 343 348 57.0 7e-96 MFNFIKKQFIDVIQWPNPDDSLLMWRFPIADEEIQNGASLTVREAQMAMFVDEGVTADVF GPGRYTLNTQTLPLLTNLKNWDKLFESPFKSDVYFFNTKQQLARKWGTSQPVTVRDSEFG AVQLRSFGMYAYRISDPAKFFKEVSGVAAEYSGVELEAQLRNIAVTQLAAAFGSSGIPFL DMAANQVLLSQKIGELLGAEFAKLGLTLENFTVESITLPAAIQEALDKKISMGVIGDLGR YTQYQTAESIPLAAQNEGGLAGIGAGLGVGAGVGQAMAGAMAGMMQPAAQPAAQPAQNVQ TTSEDPQTKLAKLKSLLDGGLIAQEDYDKAKTEVLKQLIG >gi|289656362|gb|ADEA01000005.1| GENE 44 41561 - 43090 1799 509 aa, chain + ## HITS:1 COG:no KEGG:RS05340 NR:ns ## KEGG: RS05340 # Name: RSp1295 # Def: hypothetical protein # Organism: R.solanacearum # Pathway: not_defined # 7 494 2 466 482 322 38.0 3e-86 MSNTPFFKTDCPSCGAPVEAHSASAVTLVCGYCNSMLVQQDDGIVDSGRDSALLEDFSPL QIGTTGTFVTQRFTLVGRLQVQYDDGAWNEWYALFADGRTGWLSEAGDLYVMTMPVETDN PPRFEDIRAGFSELTFQNKRYVASDVRHISLKRAAAQGELPFVLNEDSQNKVADWRCEDL FITLDYSDETPETFFGRMVNLDDLKLENTRSEDEIKESAGRLKGSIASENCPSCGSSVHW VSGLTPHLNCTSCGSELAIGKDKAELITANAMRTAQQSLFTLPVGRQGRLKNREFYVMGA VRYAETDAQETFENLFNGLNRTLTPEGQWSEYLLYNPTQGFLWLVESDDGWNLSQTQNTW PRLDRNRQPQGCGKLYDYGGRVEVAAGAFYWRIRSGDLNYYSDYRDGQNRKLCAELNTHE MAWSKSVPVAYSEIAEAFNLSSRAPHYTVNMTEDAVDNKLRLLMIGILIIVNIPAFLMSG GDHLTIIITLFFAGYAIWVIGREKDEEED >gi|289656362|gb|ADEA01000005.1| GENE 45 43094 - 43264 268 56 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSRIGYIICATAAIVVATMLNYASLSSSSDGSRTHSGGYYGGGSYSGGSGYSGGHK >gi|289656362|gb|ADEA01000005.1| GENE 46 43261 - 43617 401 118 aa, chain + ## HITS:1 COG:RSp1293 KEGG:ns NR:ns ## COG: RSp1293 COG1586 # Protein_GI_number: 17549512 # Func_class: E Amino acid transport and metabolism # Function: S-adenosylmethionine decarboxylase # Organism: Ralstonia solanacearum # 6 115 19 137 140 99 50.0 2e-21 MTHIPGNHGLLDLYGCDEAILKDQGRLKTALKAAAQAAEATVLAERFHTFGGAGGITGVL LLAESHISIHTWPEHRFAAIDAFICGGMKLEKVKEVLCRELAAERSTWAVVERGGGIV >gi|289656362|gb|ADEA01000005.1| GENE 47 43674 - 45290 1822 538 aa, chain + ## HITS:1 COG:no KEGG:BamMC406_4801 NR:ns ## KEGG: BamMC406_4801 # Name: not_defined # Def: hypothetical protein # Organism: B.ambifaria_MC40-6 # Pathway: not_defined # 38 533 29 538 539 408 46.0 1e-112 MPTRRRFLSYTAALAVASSFSWLTYNRLNRKPPVSVNRVGLPVGHLLRDGKLLSPPSRGY ECNTLILGGGAAGLGALWYLAKHGHRDVLLAEGFERNGNNAAYAASGGLQAPGGAHYLAL PSKESAYVREMLADFGILQSDGRFRETDLVYAPESRLLYQDKWQEHLLPKEDADSKRFFD LIGRLKQAYGSDGKKIFAIPIALSSADETWRKLDKLTFKQWLTQEGYTSTELLWYLDYCC RDDYGQGIAQVSAFAGLHYFAARNSAETVLTWPEGLARLSENLRRHAGLQEGWQWSSENR IRLDKPASVNASAVKIKPLSDDRIEVWLRDNSSGETVALTARHVISAMPLMVAARIVENP AQYGLNIPEYAPWLVANFELHSFPKEKNNSETAWDNVIYGSQGLGYVVATNQLIRVARPE RTIFTAYAALNHDTPQTVRRQLLDATDEELRDLAAKDLIAAYGEGFWQHVSHVDVTVRGH GMSVPKVGYLNDESLLKIRNRASGLLFAHSDLSGYSVFEEALYWGVEAAKKVLKSAKA >gi|289656362|gb|ADEA01000005.1| GENE 48 45995 - 47374 1465 459 aa, chain + ## HITS:1 COG:RSc2451 KEGG:ns NR:ns ## COG: RSc2451 COG3264 # Protein_GI_number: 17547170 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Ralstonia solanacearum # 131 425 136 430 447 208 42.0 2e-53 MNAILHDLFARQAFTSSLLERNFSQTSGWIELAGVLALMAATFFLSEYLINKYFSGHRRN FLLLRHIGCRLLWPLLMMITGALALFVCNLTEFRAVWLHLLILAARWMILIRASVAVVHA ALPQNRLTDWLERVVSMVLWVGFVLWLSGFDDKILETLEAIRFTVGSGKLSLLTILNGIL WVGILMIGASWLARFIGERLEKSSLDTNLSMILSKVVKTVMMVLAVLIALPLVGIDLTVL SVFGGALGVGIGFGLQKVASNYISGFIILGDRSIRMNDRLTVNNFTGYVTKITSRFVVLR NANGTEALIPNETFVTSMVVNESYTSRELQQAFNIQVAYHSDLIKALDIIKSAAAAQPRV SANPAPLAVVTNFGDNGIDLRATYWVKDPENGFAALQSAIFLDIWRQFNEHGIEFPYPQR EVRILNESLAPSNIAMIKAGMQARSDTKSDPAMDAAGDD >gi|289656362|gb|ADEA01000005.1| GENE 49 47374 - 47817 424 147 aa, chain + ## HITS:1 COG:NMB0642 KEGG:ns NR:ns ## COG: NMB0642 COG0494 # Protein_GI_number: 15676542 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Neisseria meningitidis MC58 # 1 147 3 149 152 222 74.0 2e-58 MAKPLKYPVSALVVLHDGQGHILLIERADRPGFWQSVTGSIEQGESIEQTARREVWEETG IRLSDGQLCNWHESSVYEIYHHWRHRYPEGVFENREHVFSAEIPRNTPVRLAEGEHTAYG WFDVAEAAEKVFSPSNRAAILDLHKHM >gi|289656362|gb|ADEA01000005.1| GENE 50 47909 - 48937 1257 342 aa, chain + ## HITS:1 COG:NMA1164 KEGG:ns NR:ns ## COG: NMA1164 COG0547 # Protein_GI_number: 15794110 # Func_class: E Amino acid transport and metabolism # Function: Anthranilate phosphoribosyltransferase # Organism: Neisseria meningitidis Z2491 # 1 340 1 340 352 507 83.0 1e-143 MITPQQAIARLISNNELFYDEMTDLMRQIMSGQVMPEQIAAILTGLRIKVETVSEITAAA AVMREFASKVPVRDGSGLVDIVGTGGDGAKTFNISTAAMFVAAAAGAKVAKHGGRSVSSS SGAADVMEQMGAVLDVTPEQVAESIDKTGIGFMFAPNHHSAMRYVAPVRRALGFRSIFNI LGPLTNPADAPNQLLGVFHVDLCGILSRVLQQLGSEHVLVVCGEDGLDEITIAGKTRVAE LKDGTIREYDLNPADYGIEIRRNLDDIKVADSRESLLKIQGVLDGERGAARDIVLLNAAA ALYAGNVVPSLAEGVDAAGEAIDSGKAKAKKDEFVAFTKQLA >gi|289656362|gb|ADEA01000005.1| GENE 51 49020 - 49586 946 188 aa, chain - ## HITS:1 COG:NMA1469 KEGG:ns NR:ns ## COG: NMA1469 COG0652 # Protein_GI_number: 15794370 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family # Organism: Neisseria meningitidis Z2491 # 1 188 1 185 185 232 65.0 2e-61 MKILSKLALSTLVLAASFTAQAETRAVIETNMGNIGLSLDETKAPKTVANFVSYARKGFY DNTVFHRVIDGFMIQGGGFTPDMVQKATDKAIGNEADNGLKNTVGTIAMARTGNPNSATS QFFINTADNEFLNFKNKTAQGYGYAVFGKVTSGMEVVEKIAKVQTTDRGYHQNVPVKPVV IRKVTIGQ >gi|289656362|gb|ADEA01000005.1| GENE 52 49727 - 50290 976 187 aa, chain - ## HITS:1 COG:NMB1030 KEGG:ns NR:ns ## COG: NMB1030 COG2353 # Protein_GI_number: 15676917 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis MC58 # 1 187 1 187 187 318 92.0 4e-87 MKKIIFAALAAAAIGTASAATYKVDEHHANARFAIDHFNTSTNVGGFYGLTGSVDFDQAK RTGKIDITIPVANLQSGSQHFTDHLKSADIFDAAKYPNIRFVSTKFNFNGKKLLSVDGNL TMHGKTAPVKLKAEKFNCYQSPMAKTEVCGGDFSTTIDRTKWGVNYLVDAGMTKTVRIDI QIEAAKQ >gi|289656362|gb|ADEA01000005.1| GENE 53 50542 - 51936 1460 464 aa, chain + ## HITS:1 COG:NMA1647 KEGG:ns NR:ns ## COG: NMA1647 COG0477 # Protein_GI_number: 15794541 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Neisseria meningitidis Z2491 # 11 463 56 508 513 525 65.0 1e-149 MEITLPISPQPSRWLPLLLAIAIFMQMLDATILNTALPNIAADLDESPLDMHSAVVVYTL TVALLIPLSGYLADRFGTRNVFVGSMAVFIAGSLLCAAAQNLPMLVMARMVQGVGGSMLA PVPRLTIIRVYEKSQLLNAINYAVMPALIGPIFGPPVGGYLVEYASWHWIFLLNVPIGLI GIAAALKIMPNVKGVRVPFDTAGFLMFASAACALIMAVEVISHPQAVPFAAGLAVAGAAA LWLYARHARRTETPLYAGDLFQVRTFRLGLAGNLFSRLGISSVPFLLPLLFQVAFGFGAG LSGGLVAAAAFASLLAKPLVRPIMAHYGYRGVLTANTRLLGILIMLVALPDVHTPLGVWV ALLLAMGLCNSIQFSAMNTLTLADLRPYQAGSGNSLMAVNQQLSMSFGIALGALMLQGWT KSSFGAENLHTAFRLTFLGIGAVTFASGFIFARLHRSDGQNLTE >gi|289656362|gb|ADEA01000005.1| GENE 54 52057 - 53592 2075 511 aa, chain + ## HITS:1 COG:NMB1434 KEGG:ns NR:ns ## COG: NMB1434 COG1502 # Protein_GI_number: 15677292 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes # Organism: Neisseria meningitidis MC58 # 21 511 22 508 508 687 71.0 0 MNLRYTVLMMPAFLIGCASLPSLDGRTESRYLDTPSSPRLEASLKLAHKKQPADSDADTS DVYLLNDAHDAFVARAELIDAADHTLDIQYYIWHNDISGKLLFNLVHRAAERGVRVRLLL DDNNTDGLDNILLALDSHPNIEIRLFNPFVSRRWRALGYLTDFPRLNRRMHNKSLTADNR ATIVGGRNIGDEYFKVGEDTVFADLDILATGKVVTEVSEDFDRYWASNSAYPARSIIKRG SVEKGFEELAYNDDDKNGVLNRYRREIETSDLFNLLKQNKVQWHKVKTRLISDDPAKGLD RDRHKTPILQRLLAAMQAPEKSMYLVSPYFVPTKSGAHALSEIAKAGVDVTVLTNSLQAT DVAAVHSGYVKYRKPLLKAGVELYELKPNHAVPKTKDRGLTGSSATSLHAKTFIVDEKRI FIGSFNLDPRSARLNTEMGVVLESPQIAGMMRRTLITTTPDYAYKVTLNRHNKLRWQNPE DRKIYSKEPEAKFWKRVISKILSFLPIEGLL >gi|289656362|gb|ADEA01000005.1| GENE 55 53624 - 54151 206 175 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167856514|ref|ZP_02479226.1| 50S ribosomal protein L1 [Haemophilus parasuis 29755] # 5 173 20 175 175 84 31 5e-15 MKPILKAAFLAAAVAVLASCGTTPRKPAHRPTAAHKVQPVRIGNIDHTEGSQELMLHSMG LIGTPYRWGGNKTEMGFDCSGMIQFVYKNALGVSLPRTARDMAAASRKIPDGKLKAGDLV FFSTGGAHKYSHVGLYIGNGEFIHAPSSGKTVQTEKLSKPFYAKNYLGAHTFFTD >gi|289656362|gb|ADEA01000005.1| GENE 56 54330 - 55235 1145 301 aa, chain + ## HITS:1 COG:hemF KEGG:ns NR:ns ## COG: hemF COG0408 # Protein_GI_number: 16130361 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase # Organism: Escherichia coli K12 # 10 297 12 299 299 446 73.0 1e-125 MHTETVLTVLKNLQNQICAALEQEDGGAVFAREEWTGKLGVGETRVLKNGAVFEQAGVNF SHVKGSKMPASATAHRPELAGAAFEAMGVSLVIHPKNPYVPTSHANVRFFIAYPEGGEPV WWFGGGFDLTPFYPFEEDILHWHTVARDVCAPFGEGVYPEFKKWCDEYFYLKHRGETRGV GGLFFDDLNRWDFDTCLNFIKAVGEGYIEAYLPIVAKRKNTPYGERERDFQLYRRGRYVE FNLVWDRGTLFGLQSGGRTESILMSMPPLVRFEYQYAPEEGSPEARLNEFLAARDWLGEL S >gi|289656362|gb|ADEA01000005.1| GENE 57 55463 - 57322 3221 619 aa, chain + ## HITS:1 COG:NMA1361 KEGG:ns NR:ns ## COG: NMA1361 COG0129 # Protein_GI_number: 15794282 # Func_class: E Amino acid transport and metabolism; G Carbohydrate transport and metabolism # Function: Dihydroxyacid dehydratase/phosphogluconate dehydratase # Organism: Neisseria meningitidis Z2491 # 1 619 1 619 619 1226 97.0 0 MPEYRSKTSTHGRNMAGARALWRATGVMETDFGKPIIAVANSFTQFVPGHVHLHNMGQLV AREIEKAGAIAKEFNTIAIDDGIAMGHSGMLYSLPSRDLIADSIEYMVNAHCADALVCIS NCDKITPGMLIAAMRLNIPTIFVSGGPMEAGKVIGVANIQPERRLDLIDAMIESADDNVS NQQVEEVEQNACPTCGSCSGMFTANSMNCLTEALGLSLPGNGSYLATHAGRKELFLEAGR MIVEITKRYYEQDDETVLPRSIATKKAFENAMTMDIAMGGSTNTILHLLAVANEAGVDFK MADIDRLSRVVPCICKTAPNNHDYYMEDVHRAGGIFAILKELDKAGKLHTDVYTIHAPTL KDAIEKWDVTNPENTHAIERFKAAPGGVRTTQAFSQNRMWKTLDLDREKGCIRNVEHAYS QDGGLAVLFGNIAERGCVVKTAGVDESILKFTGRARVFESQEAAVEGILGNQIVAGDIVI IRYEGPKGGPGMQEMLYPTSYLKSKGLGKACALLTDGRFSGGTSGLSIGHASPEAAEGGA IGLVHEGDTIEIDIPNRSINLKVSDEELAARRAEMEARGSKAWKPENRDRYVSAALRAYG AMATSADKGAVRDVSQIER >gi|289656362|gb|ADEA01000005.1| GENE 58 57397 - 57528 181 43 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDKFILAMIALAVILAVIIGGGFIAVEYTKKHPEMFEVKPERK >gi|289656362|gb|ADEA01000005.1| GENE 59 57721 - 57942 421 73 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298368722|ref|ZP_06980040.1| ## NR: gi|298368722|ref|ZP_06980040.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 73 1 73 73 97 100.0 2e-19 MKKLLIAAAVLALAGCHSTWNGVKADSSRIVGRSVSGIGHGIGKAGAALERSGEQIDGRA PAQSANNAVQQPY >gi|289656362|gb|ADEA01000005.1| GENE 60 58066 - 59358 1534 430 aa, chain + ## HITS:1 COG:no KEGG:NGO0683 NR:ns ## KEGG: NGO0683 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae # Pathway: not_defined # 1 430 1 426 426 403 50.0 1e-111 MKSLAVWLVLAGLLFSLFRYVEEGELSGADLLRALPPADTSAIEGLDGLGYLNYLRKEAG LPALAKSELLERSARNHARYLTDYPDEGHDEKHTASPLFSGETPSDRAASVGYPYGGVRE NVSTGRIQRGASSGGDTVRQQADGLMAAVYHRFSLLEQGIDEAGAAYEEQNGHQALVVNQ GNSLYRKLCASGRLNAEPDRPFYTDACTNGAIVYADEMKPRQEIPYVVYPVGNSAVPEFY GERPDPVPDRAITGNPASIAFSETAGRIEMQSFKLYRGDEEVAPVRVLTRRNDPNRKFTD RQFALFPLNPLEYDTAYRAVFRYSRNGQKAKAEWTFRTKRPDYPYFIVKGGEKLAVSDGI EYFIRPQRRWCLKDCPDVVYQIAGGATLEVLKHMPGGIVVRMSGRRGDKARLMLDGGRNK RKAVELYLTD >gi|289656362|gb|ADEA01000005.1| GENE 61 59443 - 59676 330 77 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298368724|ref|ZP_06980042.1| ## NR: gi|298368724|ref|ZP_06980042.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 77 1 77 77 107 100.0 3e-22 MSQNVQIKANTRCAFACIGLMLFSFAVFAFVSVVPAGLSGAARITVIRVSLYALLAFAVL GGIFSIRVAVLRKKAGK >gi|289656362|gb|ADEA01000005.1| GENE 62 59700 - 60137 501 145 aa, chain + ## HITS:1 COG:NMA0955 KEGG:ns NR:ns ## COG: NMA0955 COG3536 # Protein_GI_number: 15793912 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 6 125 10 129 130 167 67.0 5e-42 MNHPNNRIPEEIRLQHGRGALTLVYGAEQKSLSAEFLRVFSPSAEVRGHAPGQEVLQTGK AGVTIMGLEPVGQYALKITFSDGHDSGLYDWAYLHKLAHDYDALWADYLRRMELAGASRI PSPDDLKAGPKSGHACGSGGCGGRH >gi|289656362|gb|ADEA01000005.1| GENE 63 60158 - 61081 772 307 aa, chain + ## HITS:1 COG:lin2084 KEGG:ns NR:ns ## COG: lin2084 COG1234 # Protein_GI_number: 16801150 # Func_class: R General function prediction only # Function: Metal-dependent hydrolases of the beta-lactamase superfamily III # Organism: Listeria innocua # 1 307 1 304 306 323 53.0 2e-88 MELQFLGTGAGSPSKARNVTCTALKTGGKNNEVWLFDCGEATQHQILRTNIRPGKIRRIF ITHLHGDHIFGLPGLLSSRSFLGGADGPLSLYGPAGIRRFVESALEVSQTQLSYPINFHE FVSDGLILDDGEFTVSAFGLAHSLPSFAYRIEEKERAGGLQIDRLRELGIPSGPLLGRLK NGETVTLDDGRLIDGKEYLSPPRKGRIIAVFGDTKPCRSALAAAEGADVLVHEATFAAGD EAMAEKVFHSTVSDAANLAAEAGVKQLYLTHISARYADEEQRQMLERQAQNIFPASKVVG DFDVFNI >gi|289656362|gb|ADEA01000005.1| GENE 64 61111 - 61848 332 245 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163754278|ref|ZP_02161401.1| 30S ribosomal protein S15 [Kordia algicida OT-1] # 25 244 1 221 221 132 36 1e-29 MSDHKTHFGFSTVDENEKAGKVAEVFHSVAKNYDIMNDVMSGGLHRVWKRFTINTARLKK GDKVLDIAGGTGDLSRGWAKRVSKEGEVWLTDINSSMLTVGRDRLLNEGLILPVSLADAE KLPFPDNYFNLVSVAFGLRNMTHKDAALKEMQRVLKPGGTLLVLEFSKVYKPLEGVYDLY SFKLLPVMGKLIAKDADSYQYLAESIRMHPDQETLKQMMLDAGFDSVDYHNMSAGIVALH KGVKF >gi|289656362|gb|ADEA01000005.1| GENE 65 61904 - 63811 2985 635 aa, chain - ## HITS:1 COG:NMA1249 KEGG:ns NR:ns ## COG: NMA1249 COG0488 # Protein_GI_number: 15794184 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Neisseria meningitidis Z2491 # 1 635 1 636 636 1135 96.0 0 MNILSVENASFAVGHVALLDKTSFQLDSGEKIGLIGRNGAGKSSFLKILAGVQKLDDGQI IVQNNLKIVYVPQESFFDKEATVFDTVAEGLGEIRDLLRRYHRVSHELEHGSDDVLLREL NELQLEIEAKDGWKLDAAVKQTLGELGLPENEKIGNLSGGQKKRVALAQAWVQKPDVLLL DEPTNHLDIDAIIWLENLLKAFEGSLVVITHDRRFLDNIATRIVELDRGILRSYPGSFSK YSEKKAQELAVEAEHNRLFDKFHAQEEAWIRKGIEARRTRNEGRVRRLEELRRQRAERRN VQGQVNFKLDSGEKSGKIIAELEHASFAYGDKVIMDKFSAILQRGDKIGLIGPNGIGKTT FLKLILGELQPTYGRIRIGSKQEVAYFDQFRSALNENDTVFYTLGQGNDYVEVGGKKKHV MSYLEDFLFHPARAQSPVSSLSGGERNRLLLAKLFTRPANILVLDEPTNDLDIDTQELLE DLLRDYQGTVFLVSHDRMFLDNVITQSIVFEGQGRLKEYIGGYQDYIDAKSREEKIQTAP APKTTAEPEKAKPKANRTVKLSYKEQRELDALPDEIAALETEQAEINAQLSDPEIFKDYE KAGALQNRAEEIETLLLEKLERWELLEAKQNGGAV >gi|289656362|gb|ADEA01000005.1| GENE 66 63919 - 64128 412 69 aa, chain - ## HITS:1 COG:NMA1476 KEGG:ns NR:ns ## COG: NMA1476 COG2608 # Protein_GI_number: 15794377 # Func_class: P Inorganic ion transport and metabolism # Function: Copper chaperone # Organism: Neisseria meningitidis Z2491 # 1 68 25 92 94 92 69.0 2e-19 MQTVTLNIGGMSCGGCVKSVTRILEGIDGVGKAEVSLENKNAAVTFDPAKTNPDALIEAV EDGGFDASR >gi|289656362|gb|ADEA01000005.1| GENE 67 64346 - 65539 1545 397 aa, chain + ## HITS:1 COG:PA4113 KEGG:ns NR:ns ## COG: PA4113 COG2814 # Protein_GI_number: 15599308 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Pseudomonas aeruginosa # 2 365 3 366 396 336 56.0 5e-92 MATSETQKKQWLSVMALAVGAFIFNTTEYIPIALLSDIGKSFNMPPTGVGVMITVYAWIV ALLSLPLMLATKNFERRRLLLVLFALFTASHAVSFLAWNFEILLLSRIGIALTHAVFWSI TASLAVRVAPQGKGNQALGLLSTGTVMAMVMGIPLGRVIGQYFSWQVSFLLIGVCAAAVM MILAKNLPLLPSRNSGSLSSLPVLLKRKNLMMLYALTVLVITAHFTAYSYVEPFVLQTGG FRPEQVTLVLGLYGLAGFSASYVFGRWFAKFPRRFLTGSVGVIMSATLLLLPLAGYAPAV YVLCFIWGMAISIVSLGMMSKVLNFASDATDVASSIYSGLYNVGIGGGALLGHYVTVWFG LNTIGVAGALLAAAALWLCWLLVGRGDFMEKIESDKG >gi|289656362|gb|ADEA01000005.1| GENE 68 65632 - 66066 514 144 aa, chain - ## HITS:1 COG:no KEGG:NMC1129 NR:ns ## KEGG: NMC1129 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 142 1 142 144 174 76.0 9e-43 MTEPKNETSAEEQAAARKKAKAKIRTIRIWAWVILALLASTALLSQCAMSKPQAKRNIIE SCIKNIPFSDKWQADLKARGLEGQGDKVIADYCTCMWERPLDKLSDKQIRSFSKISAQEQ LKLLGGADAFEERDRQCVANLKVR >gi|289656362|gb|ADEA01000005.1| GENE 69 66059 - 67366 2374 435 aa, chain - ## HITS:1 COG:NMA1395 KEGG:ns NR:ns ## COG: NMA1395 COG0460 # Protein_GI_number: 15794308 # Func_class: E Amino acid transport and metabolism # Function: Homoserine dehydrogenase # Organism: Neisseria meningitidis Z2491 # 1 435 1 435 435 751 95.0 0 MKPVNIGLLGLGTVGGGTAAVLQDNAAEISRRLGREVRIRAVCDLSEEKARQTCPSAAFV KDPFELVAREDVDVVVELFGGTGIAKETVLKAIENGKHIVTANKKLLAEYGNEIFPLAEE KNVMVQFEAAVAGGIPIIKALREGLAANRIRSIAGIINGTSNFILSEMREKGSAFADVLK EAQALGYAEADPTFDIEGNDAGHKITIMSALAFGTPMNFSACYLEGISKLDSRDIKYAEE LGYRIKLLGITRKTDKGIELRVHPTLIPESRLLANVNGVMNAVRVNADMVGDTLYYGAGA GALPTASAVVADIIDIARLIDADTGHRVPHLAFQPAQVQAQTILPMDEITSSYYLRVQAK DEPGTLGQIAALLAKENVSIEALIQKGVIDQTTAEIVILTHSTVEKNIKRAIEAIEALSC VEKPIIMIRMESLHD >gi|289656362|gb|ADEA01000005.1| GENE 70 67546 - 67917 318 123 aa, chain + ## HITS:1 COG:NMB1227 KEGG:ns NR:ns ## COG: NMB1227 COG3737 # Protein_GI_number: 15677099 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis MC58 # 1 123 9 131 131 108 43.0 2e-24 MLIEENWGADGFTVTAYGGGALEIGGKIYREPVVLKDGTVGLMDGRKPSDLSAEDFFQTA SSEEPPEIVLVGTGERQQFLHPKIAAELAAHGIGLECMNTASACRTLMLLQGEGRRVWAW LWP >gi|289656362|gb|ADEA01000005.1| GENE 71 68004 - 68795 1277 263 aa, chain - ## HITS:1 COG:NMA1576 KEGG:ns NR:ns ## COG: NMA1576 COG0171 # Protein_GI_number: 15794469 # Func_class: H Coenzyme transport and metabolism # Function: NAD synthase # Organism: Neisseria meningitidis Z2491 # 1 262 11 272 273 412 78.0 1e-115 MQTQAVIGHITGWLKDYALNARAKGFVVGVSGGIDSAVVSALAARTGLSVLLLDMPIRQK ADQSGRAQEHIRDLTRLFPNVSGQTVDLTPTFDTFAATVEARGSEFPDKQLALANARSRL RMVTLYYYGQLHGCLVTGTGNKIEDFGVGFFTKYGDGGVDISPIADLTKTQVYQLAAELG VAESIQKAVPTDGLWDTERTDEEQMGASYPELEWAMSVYGTAKPEDFEGRRREVLEIYTR LHKAMQHKVNPIPVCTIPAALLE >gi|289656362|gb|ADEA01000005.1| GENE 72 69065 - 70609 1777 514 aa, chain + ## HITS:1 COG:NMB1362 KEGG:ns NR:ns ## COG: NMB1362 COG0477 # Protein_GI_number: 15677227 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Neisseria meningitidis MC58 # 1 512 1 512 513 786 86.0 0 MKFLDRQATVAKPGFNRWLVPPAALAVHLAIGQIYAYSVFNAPLTKLIGISEPAAGDWQL ATVGWIFSIALAMLGASAALFGTWMERVGPRKAMFVAACCFGSGFLISALGVHRHNLFLL YLGNGVIGGVGLGLGYIGPVSTLMKWFPDKPGMATGLAIMGFGGGAMLASPLSVALMGFF SSPVSVGVAETFVVLGIFYFVLMMFGAFTIRVPADGWKPDGYVAPKSAGRLVSNNHVNVS QAMKTPQFWLLFWILCLNVTAGIGVLGQASVMIQELFSEVSVGKSAAVGAGAAAGFVSLL SLFNMGGRFVWSSVSDKIGRKNTYTVFFVLGALLYFAIPSIGASGNKVLFIIGFCAIISM YGGGFAAIPAYLKDLFGTYQVGAIHGRILLAWSTAAVIGPVLVNYIRQGQIDRGVPAAEA YGVTMYIMAALLVAGLLCNLCVKAVHEKHHETDIKKAAVSGNPDDETAISDAYLLKENVS RGGISVWWRWAVVSIPLFYGVVMVFAKALDLFRV >gi|289656362|gb|ADEA01000005.1| GENE 73 70698 - 71183 647 161 aa, chain - ## HITS:1 COG:NMB1482 KEGG:ns NR:ns ## COG: NMB1482 COG1607 # Protein_GI_number: 15677335 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA hydrolase # Organism: Neisseria meningitidis MC58 # 1 160 1 160 160 301 89.0 2e-82 MEQTRQLPSHELIMSELMMPDTANFSGNVHGGELLRLLDQVAYSCASRYSGNYCVTLSVD KVLFKEPIHVGDLVTFYASVNYTGRTSMEIGIRVEAQNIRTGEVRHTNSCYFTMVAVEDG KPVPVPPLEITTERQRCRFDKAKKRKELSLRAADESSCGCD >gi|289656362|gb|ADEA01000005.1| GENE 74 71259 - 72329 1681 356 aa, chain - ## HITS:1 COG:TM0561 KEGG:ns NR:ns ## COG: TM0561 COG0598 # Protein_GI_number: 15643327 # Func_class: P Inorganic ion transport and metabolism # Function: Mg2+ and Co2+ transporters # Organism: Thermotoga maritima # 66 356 61 351 351 238 41.0 1e-62 MSQQPNTAEQSEIPQDQTVPRSNTDNAPRSAIHQTLYSADTFAQHDYLAGKKLPDIARPQ AGQTNWLHFVGINNAALLKHALEPYCIHELVVEDILSRKQRPKIEDYGNYLFIAAQVYHY TAAGKLHSDQVYLIIGKDFVLSFQQKPLGLFSQLRRQMSENPRGILGKNTAFLAYCLLDR IVDDYFIVLEEYNNRVEAIDKSLFKDENSDILGKIHRLKRDAVRLRRTLLPLRDVFYQLA VRGDFAIFKGESTVYLRDVYDHNIQLIESLDASRDMVLSMMDIYLSFQSNRMNQQMRVLT VITIIFMPLTVITGIYGMNFDNMPELHWHYGYFMVLGLMLCIIVGLLIFFSRRKWL >gi|289656362|gb|ADEA01000005.1| GENE 75 72703 - 74514 2893 603 aa, chain - ## HITS:1 COG:NMA1370 KEGG:ns NR:ns ## COG: NMA1370 COG1217 # Protein_GI_number: 15794291 # Func_class: T Signal transduction mechanisms # Function: Predicted membrane GTPase involved in stress response # Organism: Neisseria meningitidis Z2491 # 1 603 1 603 603 1171 98.0 0 MKQIRNIAIIAHVDHGKTTLVDQLLRQSGTFRANQHVDDRVMDSNDIEKERGITILAKNT AIDYEGYHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGL KPIVVINKIDKPSARPSWVIDQTFELFDNLGATDEQLDFPIVYASGLSGFAKLEETDESN DMRPLFDTILKHTPAPSGSADETLQLQISQLDYDNYTGRLGIGRILNGRIKPGQVVAVMN HEQQIAQGRINQLLGFKGLERVPLEEAEAGDIVIISGIEDIGIGVTITDKDNPKGLPMLS VDEPTLTMDFMVNTSPLAGTEGKFVTSRQIRDRLQKELLTNVALRVEDTADADVFRVSGR GELHLTILLENMRREGFELAVGKPRVVYREINGQKCEPYENLTVDVPDDNQGAVMEELGR RRGELTNMESDGNGRTRLEYHIPARGLIGFQGEFMTLTRGVGLMSHVFDDYAPVKPDMPG RHNGVLVSQEQGEAVAYALWNLEDRGRMFVSPNDKIYEGMIIGIHSRENDLVVNPLKGKK LTNVRASGTDEAVRLTTPIKLTLEGAVEFIDDDELVEITPQSIRLRKRYLSELERRRHFK KLD >gi|289656362|gb|ADEA01000005.1| GENE 76 74990 - 75454 803 154 aa, chain + ## HITS:1 COG:NMB1207 KEGG:ns NR:ns ## COG: NMB1207 COG2193 # Protein_GI_number: 15677080 # Func_class: P Inorganic ion transport and metabolism # Function: Bacterioferritin (cytochrome b1) # Organism: Neisseria meningitidis MC58 # 1 154 1 154 154 257 90.0 5e-69 MQGNQAVLDYMNELLSGELAARDQYFIHSRLYSEWGYTKLFDRLNHEMEEETTHAEQFIR RILMLGGTPKMVRAELNIGTDVKSCIQADLNTEYEVRDALKKGIRLCEEAQDYVTRDLML QQLKDTEEDHAHWLEQQLRLIELVGEQNYLQSQM >gi|289656362|gb|ADEA01000005.1| GENE 77 75483 - 75956 877 157 aa, chain + ## HITS:1 COG:NMA1376 KEGG:ns NR:ns ## COG: NMA1376 COG2193 # Protein_GI_number: 15794297 # Func_class: P Inorganic ion transport and metabolism # Function: Bacterioferritin (cytochrome b1) # Organism: Neisseria meningitidis Z2491 # 1 157 1 157 157 236 87.0 9e-63 MQGDRLVIRELNKNLGLLLVTINQYFLHARILKNWGFEELGEHFFKQSIKEMKSADDLIE RILFLEGLPNLQDLGKLLIGESAEEILSCDLQKEQEKHEALIEAIALCEEKQDYVSRDLL EKQKDINEEHIDWLETQQELVVGIGLANYLQTGAQED >gi|289656362|gb|ADEA01000005.1| GENE 78 76098 - 76535 727 145 aa, chain - ## HITS:1 COG:NMB0925 KEGG:ns NR:ns ## COG: NMB0925 COG1607 # Protein_GI_number: 15676820 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA hydrolase # Organism: Neisseria meningitidis MC58 # 11 145 11 145 148 253 91.0 1e-67 MPQNTELHTDPQGELLLRTVAMPRDTNPNQDIFGGWIMSQMDLGGGILAAEIAQGRIVTV AVQEMNFIRPVRVGNVVCCYGRCVHVGNTSLQLKIEVWVKTLMNDHLTENRQLVTEAVFT YVAIDAEGNTRPIPKEGNPKLAGLL >gi|289656362|gb|ADEA01000005.1| GENE 79 76640 - 77578 1326 312 aa, chain + ## HITS:1 COG:NMB0927 KEGG:ns NR:ns ## COG: NMB0927 COG0596 # Protein_GI_number: 15676821 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Neisseria meningitidis MC58 # 1 305 1 305 310 526 82.0 1e-149 MHPICEPIRSGLLQVSGIHQIYWEESGNPDGLPVIFLHGGPGAGASPACRGFFNPDVFRI VIIDQRGCGRSLPYACTDDNTTWDLVADIEKVREMLGIRKWLVFGGSWGSTLSLAYAETH PERVAGLVLRGIFLCRPSETAWLDEAGGVSQIYPAQWQKFLAPVAEEKRGGLIAAYHEML FGEDEAGRLKAAKAWADWESYLIRFEPQDVDEDAYQSLAIARLENHYFVNEGWLKGDKAI LANTDKIRHIPTIIVQGRYDLCTPMQSAWELSQALPEAELRAVQAGHSAFDAPLAEALVR AVEDMEKRADWS >gi|289656362|gb|ADEA01000005.1| GENE 80 77640 - 78212 560 190 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|134277849|ref|ZP_01764564.1| ribosomal protein S16 [Burkholderia pseudomallei 305] # 7 188 2 187 194 220 61 4e-56 MPDTVTIGLVSTSDRASGGIYPDEGIPSLKAWLAKAVRNPVRFIEALVPDEQAEIEAALK KMADGDRCDLIFTTGGTGPAPRDVTPEATLNVVEKEMPGFGEQMRQISLYYVPTAILSRQ TAGIRGKCLIVNLPGRPKAIAETLGGVRGEDGGIKVHGLFSAIPYCIDLIGGPFIETDET VSKAFRPQRK >gi|289656362|gb|ADEA01000005.1| GENE 81 78221 - 78943 1060 240 aa, chain - ## HITS:1 COG:PA3004 KEGG:ns NR:ns ## COG: PA3004 COG0005 # Protein_GI_number: 15598200 # Func_class: F Nucleotide transport and metabolism # Function: Purine nucleoside phosphorylase # Organism: Pseudomonas aeruginosa # 3 237 5 239 245 205 45.0 8e-53 MLAIIGGSGLARLPELTITDRRIVRTPYGLTSSPILFGRLGGLDIVFLARHGFGHTIAPH EINYRANIWALHSIGAENIIAVSAVTSINRELENGSLVMPHDLIDYTHGRKSTFFEGQEQ AVVHTDFACPYSAELRTTLLEHVGSHGTYVYSEAVYGCTQGPRLATHAEVRRYRNDGVDV LGMTGMPEAVLARELNIGYAHFCGIIGMSCITNNGNGRPDFCQTESHQAIEKIRRLLIDL >gi|289656362|gb|ADEA01000005.1| GENE 82 78966 - 79139 133 57 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298368746|ref|ZP_06980064.1| ## NR: gi|298368746|ref|ZP_06980064.1| hypothetical protein HMPREF9016_00413 [Neisseria sp. oral taxon 014 str. F0314] # 1 57 1 57 57 80 100.0 4e-14 MMNNFALWFLSGFMSVLLWEVLPVDDGYSFAEKMKILILFSIIMTVLQTFFFPTLTP >gi|289656362|gb|ADEA01000005.1| GENE 83 79198 - 80268 1808 356 aa, chain - ## HITS:1 COG:NMA1381 KEGG:ns NR:ns ## COG: NMA1381 COG0628 # Protein_GI_number: 15794302 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Neisseria meningitidis Z2491 # 1 356 1 356 356 426 71.0 1e-119 MYQKKARGAKPWIIMGCVIAALLWLLYALGDILTPFVIAAVLAYVLNPLVEWLQLKRFKR GAASMMVMVFALSVLLALTLIIVPMLINQFNNLVARLPQITAFVQNTLLPWLSRYAGRYI ELDTQSIVGWLQSHTGELSGTLQKIMPEVMKQSGNVISGVSNLFLLPFLLYYFLLDWRRW SQGISKLVPRRFIDTYSRITGNMDEVLGEFLRGQLMVMLIMGVVYGVGLMLTGLDSGFAI GMIAGILVFIPYLGAFTGLLLATVAALLQFGTWHGLIMVWVVFGIGQFLESFIVTPKIVG DRIGLSPFWVIFSLMAFGQLMGFVGMLAGLPLAAVTLVLLREGAAAYFGSRFYKHK >gi|289656362|gb|ADEA01000005.1| GENE 84 80507 - 81544 1018 345 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169632702|ref|YP_001706438.1| phosphoribosylaminoimidazole synthetase [Acinetobacter baumannii SDF] # 1 333 7 338 356 396 58 1e-109 TMSTPLSYRDAGVDIDAGDQLVENIKPFAKRTMRPEVLGDLGGFGALVEISKKYKNPVLV SGTDGVGTKLKLAFDWDKHDTVGIDLVAMSVNDILVQGAEPLFFLDYFACGKLDVARATD VIKGIAQGCEESGCALIGGETAEMPGMYPEGEYDLAGFAVGVVEKERVINGRSIKAGDIV LGLASNGAHSNGYSLVRKIIARDNPDLDAEFDNGKTLRETIIAPTRLYVKPILAALEKFT IKGMAHITGGGITENVPRILPENTVAQIDAKAWELPKLFQWLQQAGNVETQEMYRTFNCG IGMAVVIAEEDADAVQAFLTEQGETVYRLGIIRVRNGDEHQTQVA >gi|289656362|gb|ADEA01000005.1| GENE 85 81736 - 82506 394 256 aa, chain + ## HITS:1 COG:no KEGG:SSA_0069 NR:ns ## KEGG: SSA_0069 # Name: not_defined # Def: hypothetical protein # Organism: S.sanguinis # Pathway: not_defined # 23 195 4 175 226 73 28.0 9e-12 MQNQNEASVGVWPSETAVSRLSLLLWAGITAAVCWSVADMLLVGFVQTPERYPLLSQTLA PQLDGLVDFAVLMQAGSPERLLWGVLPATFSAALYLAAAFGVYRLMRPGRTARVGFAVLF FGYALSPLGHAGFYFTGMAAKVLLNAAPDDYPPLLALFRHFYRMLAVHWMASVGSIAAGW LLLLIQTLRRRTLLPRAAAWCNPLPVGTVIAVSCSLFPQSPVAAALGGATFNLAQLVFFV CAAACVRRRGMGMQPG >gi|289656362|gb|ADEA01000005.1| GENE 86 82686 - 83330 827 214 aa, chain + ## HITS:1 COG:NMB1820_2 KEGG:ns NR:ns ## COG: NMB1820_2 COG0110 # Protein_GI_number: 15677656 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Neisseria meningitidis MC58 # 29 210 1 182 190 208 59.0 7e-54 MLTPRKKLAVVGAGGHGKVVAATAMAARWTKIVFLDDKARGEVFGLPVIGGTDLLGMSLR PAEYDLAIAVGSNDVRAHLHRRFVAMGFNQPVIVHPTAVIAPNVEIGAGSVVFAQAVVQP DSRIGEGAIINTAATVDHDCRLGGFVHISPGVHLAGGTQVGNGAWVGIGACTRQQIRIGK NAVVGAGAVVVKDISDGLTVAGNPAKPLIRPSEN >gi|289656362|gb|ADEA01000005.1| GENE 87 83462 - 85288 2812 608 aa, chain - ## HITS:1 COG:YDR001c KEGG:ns NR:ns ## COG: YDR001c COG1626 # Protein_GI_number: 6320204 # Func_class: G Carbohydrate transport and metabolism # Function: Neutral trehalase # Organism: Saccharomyces cerevisiae # 7 603 104 730 751 463 40.0 1e-130 MRIRKTETLAALLAQEDTDGSNTITVDDTGPKSFTVKGEDGDTLQVDGTYYLANLLQEIW LGNGVLEPEKVFMKPLERVDCLMQNHYWHTLSRRMDADNILTVLSDEKRSSDKAYLYVPA ADADGLAYYRSISAAHPQIEIVELPAPPFSDGLLTEIDRKPGLLALKYNSESGSPLPYVV PGGRFNEMYGWDSYFIGLGLMAHDRYDLAKGMLENTAYQIKYYGKMLNANRSYYLTRSQP PFYTPYLSAFYRRYRDRLPESWLDEHLGIAIDEYLDVWMNPQTHLFADIGLNRYFDEGRG RPKETETGHFDFILNRFAARHGISAQELEQTYDGGKIQDSELDRYFVHDRAMRESGHDTT TRLDDVCADTACVDLNAILYRVETDIAALLDDYYPQGFTRNGEIHTAAGWREKAQARRRA VRQYLWNEEHGTFYDYNVSRGSQNHFVSATNLFPLWAGLCSREQAEKTVKSQLSALLCRG GIASTAPISAEISGPERQWDYPYGWAPHQILIWEGLERYGFKEEMQRAAFAWVGMIIRAT VEYNGLIPEKFNVEKGSHKTDVEYGNVGAIFDYVPQGGFGWTNASLVLGIARLTDAQKAE LDALADKV >gi|289656362|gb|ADEA01000005.1| GENE 88 85269 - 86504 1545 411 aa, chain - ## HITS:1 COG:CC1133 KEGG:ns NR:ns ## COG: CC1133 COG0738 # Protein_GI_number: 16125385 # Func_class: G Carbohydrate transport and metabolism # Function: Fucose permease # Organism: Caulobacter vibrioides # 6 377 15 369 411 99 22.0 1e-20 MKHFGIKLALFINYFVFAILLNSVGIVIKQSLANYGVTETEASILEAFKDLPIAIVSFFV ASFLPKFGYKNSMLLALAVVFGACLYMYTGNSFTASKALFLCIGVAFAFIKVSVYSMIGL FTESKEQHNSFMSSIEGFFMVGIASAYFLFPAFFDGNNPDAWLRVYLLLAGLIAIAFFLL LFTKIDVAIPKSEGRLIDDFTGMIKLIALPLTIFFILSAFCFVMVEQGIMTWLPTFNERV LSLNDTLSVQMASILALSLAAGRFLAGQAVKKLHWLKIVSVCLLVAAAIVAFVLPQALNA GPRTIHAFSEIPAIGFIFPLIGLFIAPIYPLLSSATLSALPQRMHSSMTGLIVIFSALGG TLGSRIIGMLFQHVGGAQAFYFMLVPIAVLLVTLTLLNKFIKDYENAHPQN >gi|289656362|gb|ADEA01000005.1| GENE 89 86660 - 87316 898 218 aa, chain - ## HITS:1 COG:no KEGG:Cpin_6784 NR:ns ## KEGG: Cpin_6784 # Name: not_defined # Def: hypothetical protein # Organism: C.pinensis # Pathway: not_defined # 18 218 33 235 238 158 40.0 1e-37 MKKRYKAALFLPAAAAAYFLAAWTLSSFRVNDRQSGGEITLFLVSNGTHVDVVMPLKNNI FDWTQTVSPADSGLGDSGTEYIGLGWGERNFYLNTPSWGDLTVPTALRALSGFNRTLIHA TYYPSEPAENENTVRFSASPEQYRRLAAALRDGFRLQNGRAVAVAGAHYHSNDAFYEAEG RYHLFNTCNTWLNGKLTRSGMKGVVWTPFAGPLLDSYR >gi|289656362|gb|ADEA01000005.1| GENE 90 87437 - 88732 1483 431 aa, chain + ## HITS:1 COG:NMB1432 KEGG:ns NR:ns ## COG: NMB1432 COG0128 # Protein_GI_number: 15677291 # Func_class: E Amino acid transport and metabolism # Function: 5-enolpyruvylshikimate-3-phosphate synthase # Organism: Neisseria meningitidis MC58 # 1 429 1 429 433 720 82.0 0 MTESIRLPAVKTKPAAVALPGSKSISNRSLLLAALSDNVCEIHSLLKSDDTDRMLDALAA LGVKIEFLDGGRLKVYGTGGRFPNRSADLFLGNAGTAFRPLTAVLAVLGGSYSLHGVPRM HERPIGDLVDALRIAGADVRYEGRENYPPLHINERTDSGVREIPIRGDVSSQFLTAILMA LPLTGQAFEIRIVGELISKPYIDITLKLMARFGVNVANEGYRMFKIPAGARYHAPEHLYV EGDASSASYFLAAGLITGVPVRVTGIGRNSIQGDVAFARELEKIGADVLWGDDFIEVSRP ETRPVQAFDLDANHIPDAAMTLAVVALAADAPCTLRNIGSWRVKETDRITAMAAELRKLG AVVVEEPEAIRITPPEQLRTDAIIDTYDDHRIAMCFSLVSLMGVPVVINDPKCTHKTFPT YFDTFAGLSVG >gi|289656362|gb|ADEA01000005.1| GENE 91 89053 - 89586 880 177 aa, chain - ## HITS:1 COG:NMB0641 KEGG:ns NR:ns ## COG: NMB0641 COG0221 # Protein_GI_number: 15676541 # Func_class: C Energy production and conversion # Function: Inorganic pyrophosphatase # Organism: Neisseria meningitidis MC58 # 1 177 1 177 177 322 91.0 2e-88 MADFNKILTPGDVDGGIINVVNEIPAGSNHKIEWNHKLAAFQLDRVEPAIFAKPTNYGFI PQTLDEDGDELDVLLVTEQPLATGIFLEAKVIGVMKFVDDGEVDDKIVCVPADDRNNGNA YQSLADLPPQLIKQIEFHFNNYKALKKPGSTKVEHWGDVEEAKQVIKESIERWNKQA >gi|289656362|gb|ADEA01000005.1| GENE 92 89680 - 90264 676 194 aa, chain - ## HITS:1 COG:NMA1163 KEGG:ns NR:ns ## COG: NMA1163 COG0512 # Protein_GI_number: 15794109 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component II # Organism: Neisseria meningitidis Z2491 # 1 192 1 192 196 358 85.0 3e-99 MLLFIDNYDSFTYNIVQYFAELGQNVEVRRNDDITLEAIAALKPRYLVIGPGPCTPKEAG ISIAAIRHFAGKLPVMGVCLGHQAIGEAFGGDIVRAQTLMHGKVSPVFHHGKGMFKNLPD PVTCTRYHSLVIDRATLPECLEITSWTEDNEIMGVRHKNYAVEGVQFHPEALLTEYGHDM LRNFLEEFKDFKAA >gi|289656362|gb|ADEA01000005.1| GENE 93 90306 - 90641 371 111 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298368757|ref|ZP_06980075.1| ## NR: gi|298368757|ref|ZP_06980075.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 111 16 126 126 228 100.0 6e-59 METEDYLSRMPFTIVFIDPLHNDFQGSSRKINEYIGRIPAALPRLHQPKFAEKILEMAAH CCNMRVVVRNADSLVKHELHYIVRNGVFCSDEKMWTFINDPDNLAVVVSQP >gi|289656362|gb|ADEA01000005.1| GENE 94 90745 - 91515 1093 256 aa, chain - ## HITS:1 COG:ECs0868 KEGG:ns NR:ns ## COG: ECs0868 COG3568 # Protein_GI_number: 15830122 # Func_class: R General function prediction only # Function: Metal-dependent hydrolase # Organism: Escherichia coli O157:H7 # 8 248 12 251 253 199 40.0 3e-51 MSPTPVTVTSYNMHKGMSALNRKVQLNSMADALHDLRSDVFFLQEVQGRHQARSNKIDGF PEQPHYDFLGERLSYNRSYGKNAVYPQRHHGNAILSRLPIETLHNLNITVNRLEQRGVLH CEVLPEGWETSLVCLCAHLNLREPDRAKQYRAIFEYVSMHVDPASPLIIAGDFNDWREKS ALSLGKALNLDEVFVDGNGRRPKTFPSRMPFLSLDRVYTRNLEVLDAQIHNNKHWQHLSD HLPLSVKVRPKLKLPR >gi|289656362|gb|ADEA01000005.1| GENE 95 91912 - 92685 1196 257 aa, chain - ## HITS:1 COG:NMA1013 KEGG:ns NR:ns ## COG: NMA1013 COG1469 # Protein_GI_number: 15793969 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 1 257 1 257 257 459 89.0 1e-129 MNAIADVQSSRDLRNLPINQVGIKDLRFPITLNTAEGSQSTVARLTMTVFLPADQKGTHM SRFVALMEQQTEALDFDRLHKLTAEMVALLDSHSGKISVSFPFFRKKSAPVSGIQSLLDY DVTLTGEIKNGAYSHNLKVMVPVTSLCPCSKEISQYGAHNQRSHVTVSLTANAEVGIEEI IDCVEAQASCQLYGLLKRPDEKYVTEKAYENPKFVEDMVRDVATALIADGRIESFIVESE NFESIHNHSAYAYIAYP >gi|289656362|gb|ADEA01000005.1| GENE 96 92866 - 94023 1732 385 aa, chain + ## HITS:1 COG:NMB0802 KEGG:ns NR:ns ## COG: NMB0802 COG0626 # Protein_GI_number: 15676700 # Func_class: E Amino acid transport and metabolism # Function: Cystathionine beta-lyases/cystathionine gamma-synthases # Organism: Neisseria meningitidis MC58 # 1 385 1 385 385 732 93.0 0 MKFATKAIHSSYDCDEHNRALMPPIYQNSMFALHEIGEQVPYRYSRLSNPTRQVLEDTIA DLERGAAGFAFSSGMAGIDAVWRTFLRPGDTIVAVADIYGGAYDLLVDVYKEWGVNVVFA DLGNPDRLDELLAAHNVKLVWLETPSNPLLRLVDIKALAAKAHAAGALVGIDNTFATPYL QQPLEMGCDIVFHSATKYLCGHSDVLMGIVAVKTKELAKPLHDMMVHTGAIAGPMDCWLV LRGIKTLALRMEAHCKNALDIARRLEAHPAVEKVFYPGLPSHEHYELAKTQMPKGIGGVV TVYLKNDTREAANSVIKNMKLVKMASSLGGVESLVNHCYSQSHSGVPHDVKMEMGIKVGL LRFSIGIEEADDIWNDISKALDSTL >gi|289656362|gb|ADEA01000005.1| GENE 97 94115 - 94894 1224 259 aa, chain + ## HITS:1 COG:NMA1664 KEGG:ns NR:ns ## COG: NMA1664 COG1018 # Protein_GI_number: 15794558 # Func_class: C Energy production and conversion # Function: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 # Organism: Neisseria meningitidis Z2491 # 1 259 1 259 259 421 76.0 1e-118 MAASPEAKFTEETVLWVKHHTPKLMTFAISRPESYRFSAGQFSRLGFRDGEGFIWRAYSV VSAEYADTLEYFAVLIEGGPMSARFAVMKEGDAILLDKTATGFLLPERFPDGKDLVLLCT GSGIAPFLSILEQPEVWRRFDSISLVHSVSYADELIFNDRLAALAEHPLIEEHYCKFRFA PVTTREQTEGALSGKRIPALLESGELAAKLGMEFNTAATRFMVCGNPAMVKDTFQTLLDM GFAMHRNRLPGQIMMENGF >gi|289656362|gb|ADEA01000005.1| GENE 98 94975 - 96354 2031 459 aa, chain - ## HITS:1 COG:NMB0782 KEGG:ns NR:ns ## COG: NMB0782 COG1066 # Protein_GI_number: 15676680 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATP-dependent serine protease # Organism: Neisseria meningitidis MC58 # 1 459 1 459 459 879 96.0 0 MAKAPKTIYQCTECGGTSPKWQGKCPHCGEWNTLQESLAAPEPKNARFQSWAADTSTVQS LSAVTATEVPRNPTGMGELDRVLGDGLVDGAVILLGGDPGIGKSTLLLQTIAKMAQSRKV LYVSGEESAQQVALRAQRLELPTEGVNLLAEIRMEAIQAALKQHQPEVVVIDSIQTMYSD QITSAPGSVSQVRECAAQLTRMAKQMGIAMILVGHVTKDGAIAGPRVLEHMVDTVLYFEG DQHSNYRMIRAIKNRFGAANELGVFAMTENGLKGVSNPSAIFLASYRDDTPGSCVLVTQE GSRPLLVEIQALVDDAHGFTPKRLTVGLEQNRLAMLLAVLNRHGGIACFDQDVFLNAVGG VKIGEPAADLAVILAMLSSFRNRPLPEKMVAFGEIGLSGEVRPVARGQERLKEAEKLGFK RAIVPKANMPRNPKEFPNLEIFGIGSLQEAVDICRNAAE >gi|289656362|gb|ADEA01000005.1| GENE 99 96483 - 97961 2393 492 aa, chain - ## HITS:1 COG:NMA1546 KEGG:ns NR:ns ## COG: NMA1546 COG0793 # Protein_GI_number: 15794439 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protease # Organism: Neisseria meningitidis Z2491 # 1 482 1 482 494 700 80.0 0 MSNSTLKKVALYTLGAFSGVALSLSLQSFAAEKAKKEESLPVQSIRTMAEVYGQIKANYY QDKPDSELFEGAMKGMVAGLDPHSEYMDKKDYADLKESTSGEFGGLGMEIGQEDGFVKVI APIEDTPAERAGVKSGDFIVKIDDVSTRGMTVSEAVKKMRGKPGTKITLTLSRKNADKPI VVNLTRAIIKVKSVRHHLLESGYGYIRVSQFQERTVPGITEAAKDLTKLNKGPLKGLILD LRDDPGGLLNGAVGVSAAFLKPDVNVVSTKGRDGKAGMVLKATPEDYLLSAGKDPLSGLP AELKTIPLTVLINSGSASASEIVAGALQDHKRAVVVGTQSFGKGSVQTVIPLSNGSAVKL TTALYYTPNDRSIQAQGIVPDIEVKDKDRAFESREADLIGHIGNPNGGEDVKSRSDYQEI DKSEAGKTDGKGKQDKKKDEADLSSRRIPNPAKDDQLRKALELVKNPAEWQKSLGLAAKK PVQKKTKKDEDK >gi|289656362|gb|ADEA01000005.1| GENE 100 98159 - 99925 2009 588 aa, chain - ## HITS:1 COG:NMA1547_2 KEGG:ns NR:ns ## COG: NMA1547_2 COG4942 # Protein_GI_number: 15794440 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Membrane-bound metallopeptidase # Organism: Neisseria meningitidis Z2491 # 229 587 1 355 356 368 62.0 1e-101 MRYKPLLLALLISFSAPAFAAHNAAKSKENKAQSVKEQNIKSKKDTAKASGNKTSKQTVG KTSGKKTDADEPAGKQSRKGKADNKKNDTRQDKEDSKTTKRDKSEKQENPKSRKGKETLK GKEKTDEDKPSANVKKETAKADRKHKQDADQDEGGRGRKAAKKSDKQAERQENNEQQPDA IIGKNGTPQMRAAVTAAANDLESKKALHNRADALLVHVAATLRQTRNDLAGINRQQRDAW DKFQKLNADLGRLKTEVSSMRAQISRFVSGNYKNSQPNAVALFLKKAEPGQKTRFLRYTR YINTANEQVIRDLSKQQQELAAQENKINAELTRLKRLQAGVQSALRKQGVHNTAEQNESR RQNAQMAKDARKLLNRKDSEQRLNTLLDNLNKRKAEQHRKEAEARKKAAEARLAAADKAR KAKAAEQKSTDGQSATSGLTAEDMNLRAPVTAGHYISTNPNSFSRMQGRLKKPVQGTLAG LFGHDRGDGEVWKGVFYQAVPSTVSSIAAGTVVYASELEGYGKVVVVDHGEGYVSIYSGL GSISVADGSRIDAGAPLGISGVLPGGEEGLYLEIRYNGQNMNPLSWIN >gi|289656362|gb|ADEA01000005.1| GENE 101 100137 - 100691 468 184 aa, chain + ## HITS:1 COG:NMA1549 KEGG:ns NR:ns ## COG: NMA1549 COG3045 # Protein_GI_number: 15794442 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 17 154 16 153 186 224 83.0 8e-59 MRHQLFIAVAALILAACGGSDADKIGRASTVFNMLGKNDRIEVEGFDDPDVKGVACYISY AKKGGLKETVNLEEDASDASVSCVQTADIIRYREEAVIKPKEVFKRSASVAFKSQQIIRY YDGKRKAFAYLVYSDKIIQGSPKNSLSAVSCYNGQKADEREIAGVPNRQIFGSCVVDVAA AAKR >gi|289656362|gb|ADEA01000005.1| GENE 102 100701 - 101249 551 182 aa, chain + ## HITS:1 COG:NMA1550 KEGG:ns NR:ns ## COG: NMA1550 COG1678 # Protein_GI_number: 15794443 # Func_class: K Transcription # Function: Putative transcriptional regulator # Organism: Neisseria meningitidis Z2491 # 1 182 1 182 182 290 73.0 8e-79 MNLANHFLVAMPDMDDPFFDGSVVYICEHNEDGALGLIINKPSPVTMDLIFAASDRNIPL RFQDESVMMGGPVHVDRGYVVHTPIGNWQSSMAVTEDVALTSSRDIIENLADPKKVAKAL VSIGYSSWGKGQLEQELADNVWLTVPADEGILFDVPYENRYSAAFAKLGIEPASLICGAG HA >gi|289656362|gb|ADEA01000005.1| GENE 103 101242 - 101703 494 153 aa, chain + ## HITS:1 COG:NMB1337 KEGG:ns NR:ns ## COG: NMB1337 COG0816 # Protein_GI_number: 15677203 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) # Organism: Neisseria meningitidis MC58 # 1 150 1 150 151 243 80.0 7e-65 MLKAPAGTTLAFDFGEVRIGVAQGDAEVGLSHPLTTVTGGSNEVKFEAVAKLVDEWQPVQ FVVGLPVHADGTEHELTRLSRKFGRRLQGRFKLPVYWVDERMSSLYAESLLAEAQVFGRK QKAVLDQVAAQAILQGFFEGGAVEYFNGREEID >gi|289656362|gb|ADEA01000005.1| GENE 104 101770 - 102408 837 212 aa, chain - ## HITS:1 COG:NMA1250 KEGG:ns NR:ns ## COG: NMA1250 COG0586 # Protein_GI_number: 15794185 # Func_class: S Function unknown # Function: Uncharacterized membrane-associated protein # Organism: Neisseria meningitidis Z2491 # 1 211 1 211 214 295 77.0 3e-80 MIGTVIDFILHIDQHLTALSAQYGMWIYAILFLIIFCETGLVATPFLPGDSLLFAAGGIA AVGGMNIHIMVLILLVAAILGDAVNFMIGKYFGAKLFSNPDSKIFRRAYLEKTHAFYEKH GGKTIIIARFVPIVRTFAPFVAGMGDMHYGRFIRYNIIGALAWVLLFSYLGYFFANIPLV KNNLGLVLGAIIVISILPAVIEIVRAKYAAKK >gi|289656362|gb|ADEA01000005.1| GENE 105 102549 - 103979 2336 476 aa, chain - ## HITS:1 COG:NMA1570 KEGG:ns NR:ns ## COG: NMA1570 COG0064 # Protein_GI_number: 15794463 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) # Organism: Neisseria meningitidis Z2491 # 1 476 1 476 476 849 94.0 0 MTWETVIGLEIHVQLNTQSKIFSGASTAFGAEPNAHASVVECALPGVLPVMNREVVEKAV KLGLALDAKINQKNVFDRKNYFYPDLPKGYQISQLDLPIVEHGKLEIVVGDDVKTINVTR AHMEEDAGKSVHEGLNGATGIDLNRAGTPLLEVVSEPEMRSAAEAVAYAKALHSLVTWLD ICDGNMAEGSFRVDANVSVRPKGQAEFGTRREIKNLNSFRFLEQAINYEVEAQIEILEDG GKVQQATMLFDPEKGETRVMRLKEDAHDYRYFPDPDLLPVIISDGQLQKAKEEMPELPKE MAVRFVADYGVSDYDARLLTASRVQAAYFEEAAKASGQGKLTANWMNGELAATLNKEGME LADSPITAPRLAALVGKIADGTLSSKLAKKAFEAMWAEPEATIAEIIEKHGLQQMTDTGA IEKIIDEVLANNVKSVEEYKSGKEKAFNALVGQVMKASKGKANPQQVQELMKSKLA >gi|289656362|gb|ADEA01000005.1| GENE 106 104082 - 104708 544 208 aa, chain - ## HITS:1 COG:NMB1357 KEGG:ns NR:ns ## COG: NMB1357 COG2990 # Protein_GI_number: 15677222 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 1 202 85 286 310 315 74.0 4e-86 MKEDLLTAEKLFGQETLANMTTRKFHVVLAHLSDGLTLWLNRNDNCVDEGMWSLSLRDSE GKRLYMATFALVDGKLLAASIQGPAGEEAKNLVRSLTKQLHGLRPQQLMVTALQYFSTSL NLGGVIGIAQEHQVKLRWRLKKRVKMNYDLFWQENGATLESDGYWHLPQIPPRKDLAEIE SKKRSMYRKRYQMLDNIAAEMQACFQKT >gi|289656362|gb|ADEA01000005.1| GENE 107 104616 - 104807 145 63 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRQNDMEFARRHIGERFLPEQFFGCQQVFFHDLQPAPSVETLVDKGMYQRIGILRPPLKK GTA >gi|289656362|gb|ADEA01000005.1| GENE 108 104954 - 106411 449 485 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163737840|ref|ZP_02145257.1| 30S ribosomal protein S4 [Phaeobacter gallaeciensis BS107] # 8 471 11 452 468 177 32 3e-43 MTRYTLTQASQLLQSKQISAVELATEYLAAIAAQNPAINGYITLDQDKTLAEARAADARI AQGNATALTGVPIAYKDIFCQTGWRSACGSKMLDNFVSPYTATVVQNLLNEGMVTLGRTN MDEFAMGSTNETSFYGATKNPWNPEHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPA SHCGITGIKPTYGTVSRFGMVAYASSFDQAGPMAQTAEDCAILLNAMASFDERDSTSLER SKEDYTRDLDKPLKGMKIGLPKEYFGEGADADVQAALQNVINLLKAQGAETIEVSLPQTA LSIPAYYVLASAEASTNLSRYDGVRYGHRATQFSDLEEMYSNTRAEGFGSEVKRRIMIGT YVLSHGYYDAYYLKAQKLRRLVANDFQTAFAQCDFILAPTAPTAAPKLGSDIHDPVQMYL SDIYTIAVNLAGLPALTLPAGFSGNGLPIGVQFIGNHFSEAKILGAAHQVQLESDWHTKT PDGKA >gi|289656362|gb|ADEA01000005.1| GENE 109 106564 - 106854 500 96 aa, chain - ## HITS:1 COG:NMA1567 KEGG:ns NR:ns ## COG: NMA1567 COG0721 # Protein_GI_number: 15794460 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit # Organism: Neisseria meningitidis Z2491 # 1 96 1 96 96 135 83.0 2e-32 MALTLNDVEKIARLSRLYLDDGEKAQTLQELNDIFAMVEKMQSVNTDGIEPMAHPHEAAL RLREDKITETDRAAEYQSVAPEVHNRLYIVPQVIEE >gi|289656362|gb|ADEA01000005.1| GENE 110 107083 - 108120 815 345 aa, chain + ## HITS:1 COG:RSc0059 KEGG:ns NR:ns ## COG: RSc0059 COG1077 # Protein_GI_number: 17544778 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Actin-like ATPase involved in cell morphogenesis # Organism: Ralstonia solanacearum # 1 341 1 344 347 386 61.0 1e-107 MFQFISRYFSNDIAIDLGTANTLIYLRDKGIVLDEPSVVAIQNTSGGRDAIVAVGTEAKK MQGRAPRNIHIVRPMKDGVIADFDITERMLGLLIKKAVGGRMVVPPRVVICVPGGSTQVE RKAIRDSAFAAGAASVYLIEEPMAAALGAGLPIEDAAGSMVVDIGGGTTEIGILSLNGLA YSDSVRVGGDTFDEAIVHHLRRNRGVIIGETTAEEVKKKIGTVFGNDKTTAITVKGRSLA EGTPKSMAVTSDEVREALSEPLNQIVRSVRLALELAPPELAGDIADRGLVLTGGGALLKG MDLLLADATGLPVGIAGEPLNCVAYGAGKALDYIGTLNAVFVENM >gi|289656362|gb|ADEA01000005.1| GENE 111 108133 - 108993 751 286 aa, chain + ## HITS:1 COG:PA4480 KEGG:ns NR:ns ## COG: PA4480 COG1792 # Protein_GI_number: 15599676 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell shape-determining protein # Organism: Pseudomonas aeruginosa # 26 286 3 262 330 147 33.0 3e-35 MGQPSWRFAGNERNSGKLFFRFVGYAALSVALMILDSRLAAVQYIRQAASVVLYPMQWFS NQPVRLYQYIGTLTQSQSGLIEQNRLLLEENGRLKTRLQRDEVNLSELNELRKLYRLQQA GINDVTGAEVISSGKDPLSDKLIINKGSLDGLKAGDAVIDQNGLVGQLTQALPYSSEVTL LYSSQSIVPVMVARTGERNLLYGGGNKLDLRYFPSASDLKAKDILLTSGLDSVYPAGIPV ATVDTIERSSGSPYYTASLSPFAALRGSRFVLVVSQPKSQTTKPQQ >gi|289656362|gb|ADEA01000005.1| GENE 112 108998 - 109501 164 167 aa, chain + ## HITS:1 COG:RSc0061 KEGG:ns NR:ns ## COG: RSc0061 COG2891 # Protein_GI_number: 17544780 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell shape-determining protein # Organism: Ralstonia solanacearum # 19 156 19 154 170 78 36.0 7e-15 MSDFEDSYREIPLRIVIGSFLMAILLDFMPFPFDVFFWLPELTALALLYWVMYLPNRIGM GTAFLIGLLVDVGTAASLGLHALSYTVMVFFVLRYHRQIMLYGHVMQILVVLALLLCNQT VLVVARLFLNRQIITLQSFIAPIVGALLWPLFSQLIQMIVNFRRIRR >gi|289656362|gb|ADEA01000005.1| GENE 113 109507 - 111555 1604 682 aa, chain + ## HITS:1 COG:RSc0062 KEGG:ns NR:ns ## COG: RSc0062 COG0768 # Protein_GI_number: 17544781 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Ralstonia solanacearum # 26 662 14 656 801 529 43.0 1e-150 MNKIKSDRPAKQIDKQEAALRVKRDFRLRLVVAFALILFFFSLLFARFVYLQILHRNEFS GQASSNRITLIPTPPARGDIVDVNGVSLARNYPAFSLEVIPSKVEGRMEDLIQALGAYVE ISKTDLKRFEKFRVAYRKFENIPLKLRLTDAEAAKLSVHLHEFKGVEINSRTFREYPYGK LASHFLGYIGRISDRDQEQLDANNLTALYRGSTHIGKSGLEAYYENQLHGVPGYQEVEKD AYGNVVRVLKNVPSKMGQTLRLTLDIRMQLEADRLLEGRRGALIAINPQNGDVLAFVSKP SFDPNLFIDGIDGDTWKALNEDWQRPLINRVTQGLYPPGSTFKPFMGMALLESGKITQNT VIPAPGAWSIPGSRHVFRDSVRRGHGSANLSKAIQVSSDTFFYRLGYEMGIDKASPKLAE FGFGSITGIDLPNEYRGVLPSREWKAKRFAKSENKAAREWMPGEMVSVSIGQGYNAYTPL QMAHATASLANDGVVYQPHLAKELLNYGSREITRINPNPAKTIPFKKDNFEYVKRAMEKV LQPGGTAHRIGGGLAYSMGGKTGTAQVVQIKQGRSYNAAALAERHRDHAWFISFAPLEKP EIAIAVLLENGGWGASAAPLARSLTDFYMLNLKQSIQPPAENISGGRHTERSITAPTVFQ TAYGINTNADAESTAASAVQGE >gi|289656362|gb|ADEA01000005.1| GENE 114 111509 - 112675 897 388 aa, chain + ## HITS:1 COG:RSc0063 KEGG:ns NR:ns ## COG: RSc0063 COG0772 # Protein_GI_number: 17544782 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Ralstonia solanacearum # 29 384 11 377 380 341 52.0 2e-93 MLMRKAQRQVRYKGNEVNEIVKVLGKIKRELWSPIDSWLFFAMLLIYVMSLFLLYSADGQ EFGQLENKTLHTVLSFMLLWVIARIRPQAIAKFAPPFYILGVVLLIGVEVAGVTVNGSTR WLNLGFTRIQPSEIMKIALPVMLAWYFQRYEDSLNWKHYSAALLIVMIPVALILKQPDLG TATLIMASGLLVIFFAGLPWKAILVAVIGFIGMLPLLWNFGMHDYQRTRVLTLLDPTQDP LGAGYHIIQSMIAIGSGGIWGKGWLNGTQTHLDYIPEATTDFIFAVFGEEFGLIGNVLLL LVYLIILARGLIIAARAETLYSRALASALTMTFFCYAFVNMGMVSGILPVVGVPLPLVSY GGTATLSIMMILALLMSIGNENRFKGKE >gi|289656362|gb|ADEA01000005.1| GENE 115 112678 - 113343 787 221 aa, chain + ## HITS:1 COG:NMA1566 KEGG:ns NR:ns ## COG: NMA1566 COG2095 # Protein_GI_number: 15794459 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Multiple antibiotic transporter # Organism: Neisseria meningitidis Z2491 # 1 219 21 235 237 236 72.0 2e-62 MGLGVEISKLILAFMVLINPFGALSIYLDLTRNHNTKERRKITSVAALTVFIVITVFALT GGFLLKLLGISVGSFQVGGGILVLLIAISMMNGNSNPAKPDLGTSEEAEITIQQPKNDQN INAIAVVPIAIPMMVGPGGISTVIIYASAAKNYWDIISIIAAGLLISLICYAVLMASSRI SRFLGDTGLTILNRIMGMLLAAVSVEIIVAGLKAIFPQLIS >gi|289656362|gb|ADEA01000005.1| GENE 116 113539 - 114882 1204 447 aa, chain + ## HITS:1 COG:NMA1565 KEGG:ns NR:ns ## COG: NMA1565 COG1012 # Protein_GI_number: 15794458 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Neisseria meningitidis Z2491 # 1 447 1 447 447 702 76.0 0 MFLSHNPADGSELCRREAESWQSFLQKLHCLRIEQQSFSTLPVTARTALLSDFAARLEAN QDKLARMMCEEVGRCLRECRAELNKSVELIRYYARLAPELLAHKTIATQASLSQVRFEPL GVVLAVMPWNYPVWQVLRFAVPALCAGNACAVKPAPSVSRVTAALFDIIGSGLPVIPAWL DELDTLKAIEHTDAMAFTGSTFTGRLLAAHAGAHLKKSVLELGGSNAFIVMPDADLAQAA KEACYSRFRDAGQSCNAAKRIIVTQAVAEKFIPLFLAECAKLKTGNPLDADTTLAPLHRA DLRLRVHEQVEDALDNGAECLLGGIIPDGSGWFYPATVLDHVNPNCRVYREEVFGPVAML LRAKDATHAVELANDSPFGLGACIYTADTAKAWRFAEKIHAGSVFINRHTSSDLRLPFGG VKDSGYGRELSEFGLYEFVNVKTYWQK >gi|289656362|gb|ADEA01000005.1| GENE 117 114971 - 115810 1103 279 aa, chain - ## HITS:1 COG:NMB0822 KEGG:ns NR:ns ## COG: NMB0822 COG0501 # Protein_GI_number: 15676720 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Zn-dependent protease with chaperone function # Organism: Neisseria meningitidis MC58 # 1 279 69 347 347 470 86.0 1e-132 MKRIFLFLATNIAVLVVVRIILAVLGINGTDQVGSLLVYSAVVGFSGSIISLLMSKTVAK NSVGAEVITTPRNEEEAWLLETVAAQAYQWNLKTPEVAIYHSPEPNAFATGASKNNSLIA VSTGLLDHMRRDEVEAVLAHEMAHVGNGDMVTLTLIQGVVNTFVVFLARIVSSMIARSND GSSSQGTYFLVSMVLQVVFGFLASIIVMWFSRQREYRADAGAAKLVGAPKMIAALQRLKG SPSDLPQEMNAMGIASDTRDSLLSTHPSLDNRIARLKAL >gi|289656362|gb|ADEA01000005.1| GENE 118 116045 - 119680 3842 1211 aa, chain - ## HITS:1 COG:NMA0995 KEGG:ns NR:ns ## COG: NMA0995 COG1074 # Protein_GI_number: 15793952 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) # Organism: Neisseria meningitidis Z2491 # 1 1209 1 1202 1204 1493 63.0 0 MSEKAQTFDPLNIPIEGTNLIEASAGTGKTYGIAALFTRLVVLERLPVESVLAVTFTKAA TAELKTRLRARLDEVLQVLENISDGEDGSDGLDAYCAAHHPDDAFLPALLRRALRQESRG RLIVRLKAAIGQFDNAAIYTIHGFCQRILRDYAFLCSAPLDVELTEDNRDRLLVPAQDFW RERISGNPVLSKLVFNRRYTPQTMLAQIQKFTGRPYLVFRRPENTLEAAQQSAQAAWESI RSKLPELEAAFWRIHPALNGSSYRGNTFTGVFAELNAAAGYESLPKLSKTTHEKLPMFST EALENGLKKGQSPDAAAFAALQDLANFGRDLNSAAEAEQNTLTLLCLELLDYLADALSEQ KKARRERGFDDLLLDVHRALTDNPHAETLAQTVARNWRVALIDEFQDTDPLQYEIFQKIF ITQGNPLFLVGDPKQAIYSFRGADIYAYLQAAEDARHHYTLATNYRSHAKLVDSIGALFR RKNRPFVLERIDYADVGAARKTSRLTPARPAVQVRWLHGADAEPPNKDILRKRAAEYCAD EIAAALNDAEEGRLNFKDRPLQSGDIAVLVRTHNEGSMIARALKNRGIQSVLLHRTSVFA SAEARATASLLEFWLDPRRTEPLRFALAGVLFRYTADELHALNRDEARLLDWMDSAQTAH EQWKQQGIYAAMQHFSARHGIEARLLSHDGERSLTNYHQILELLAEEDAHNRNPSSLYQW LLEQISLASGDKKTSGENDLIRLESDEALVKIVTMHASKGLQYPLVYCPFVWDAQPLKSG DWQILHRSGGAAELLAGHQLDDADQARLADEETSERLRLLYVALTRAEEQLNIYAACCDG TPDNTFAYLLEGRADSSRGETQKAYLHRKSGKGGKTALMQMLEDNWRQFIARAPDNTDFA FADKAPAEAALQSRRGGGITYRAAVIPKRSFDIVRHTSFTGLSRHVKTRDDEREELQPAL DPAENIERPSENIVSDGLTDAEDIHHFPRGTNAGICLHEILEKFDFSLSAAEQAETVRES LSRYGFEPRWQPAVHTMLDRCRLTPLTAAYALADIPPQNRLPEMGFTLYMEDFGLERLRA WLARPNSGLPPECAEAARILDFKDVQGFLSGFIDMVYQDSDGLVCIIDYKSNHLGNNAEA YTPQTMNEAMAHHHYYLQALIYAIAVARYYTLRRRPLPRIAVRYLFLRGLDGGENGVWSW NIDTADLTEWL >gi|289656362|gb|ADEA01000005.1| GENE 119 119766 - 120674 1321 302 aa, chain - ## HITS:1 COG:NMB0786 KEGG:ns NR:ns ## COG: NMB0786 COG2837 # Protein_GI_number: 15676684 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted iron-dependent peroxidase # Organism: Neisseria meningitidis MC58 # 1 302 1 302 302 490 77.0 1e-138 MNHPQTAIIPDHCKAGIFIEADILANRQNDIKTACRESLKALKALQDKYPEDSLGMTVAF GSDAWAAFSHSGEGSEIKPFRPLGGGLAPATQHDIYVHIQSMHQDTAFALSQSVLAAFGG SIRIAGEVHGFRLLQERGLDGFVDGTENPQGDDKVRDVAIIPEGRPDAGGSYVLLQKYRH DLKKWDAVPVAEQEASIGRSKESNEEFSKEVRLPDSHLGRVNLKENGVGLKIVRRSLPFG TVSGEHGLMFTAYCHTLHNIEAQLVSMFGETDGKTDLLLRNLSAAVSGAYYYAPSVERLE NL >gi|289656362|gb|ADEA01000005.1| GENE 120 120789 - 121430 986 213 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298368783|ref|ZP_06980101.1| ## NR: gi|298368783|ref|ZP_06980101.1| lipoprotein [Neisseria sp. oral taxon 014 str. F0314] # 1 213 2 214 214 376 100.0 1e-103 MKKTAAAVAALMLAACSGDSPSNALFEKTINNYAKKEGVCLPLLLNVQDPWGVESFTPVA LGSTTVKIAEKDSKGNRINKTALKQMELLEDEGFYDEAESETLTKTGGGEKIRLSVYKLT RKGTEQVRGGEAEPRFCIGLQKVEKINWYTEPASSNGMTVARVSYKARMEPEKWAEKLIR AGGGNMPFDNKAAEQTAVLVKTSKGWKDMRELN >gi|289656362|gb|ADEA01000005.1| GENE 121 121592 - 121942 424 116 aa, chain + ## HITS:1 COG:NMB1239 KEGG:ns NR:ns ## COG: NMB1239 COG1393 # Protein_GI_number: 15677111 # Func_class: P Inorganic ion transport and metabolism # Function: Arsenate reductase and related proteins, glutaredoxin family # Organism: Neisseria meningitidis MC58 # 1 116 1 117 124 131 58.0 3e-31 MTVIYGIANCDTVKKARAWLAANGLAYEFVDFKKQPPSVGLIESWLTQIPLDALLNKRGT TWRKLTPQQQAEAADPQGAVKLMAEQPSIIKRPVLDKDGGFHVGFSEESYRTLFGR >gi|289656362|gb|ADEA01000005.1| GENE 122 122064 - 123896 2726 610 aa, chain + ## HITS:1 COG:NMB1238 KEGG:ns NR:ns ## COG: NMB1238 COG0760 # Protein_GI_number: 15677110 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Neisseria meningitidis MC58 # 1 423 1 426 512 319 47.0 1e-86 MFHTVEKYKGPAQILLGLIALTFVGFGVSTVANPDSDYIVKVGNQKISDHDLNLAMQNIQ ASGGEQPRDAVFQSLLQRAYLTQGAKQMGIAVSQEQIKQIIVDDPSFHDANGKFSQALLT QYLNQRRMSEDQFVEEIRDQFLFQNLQNLVQNGTIVSDVQAAQLVNIAQATRTVRSVTFN PEAFAGQIKVDDAILQRYYDANKKDYIIPQAVKIELVALTTQALADKQTVSDAELRQAFD KLPPRREIAHILFPVAQDASAEERAAAKAEAEKVLAMVKAKPSDFPALAKQYSKDPASAS NGGNLGFMPKDGGLGAEFENAAFSMQKGEISNVVQTAYGYHIIKILNIQDKPVFEQEKAE LEKELKLKKAAAGFNAAKEKLGEAAFNNPNSLAEAAKALGLEVKLSDEWLTKANGAAAGM PQELINAVFSDDVLKKKHNSEPITINDNTVWVVRVKEVREERTAPFAEVKDDVRAAYLRS EAVKLAEKKARAALADLQAGKKTELQWSPVTKLTAEQARQSMPPEAYSELAKARPSKDKP AYVMLQGLPAPVIVEVQAVTPPENVAQQIPAAKQLLMQQQVNSTFNNLLRYLSKNIDRKE GGQKINAASE >gi|289656362|gb|ADEA01000005.1| GENE 123 123975 - 124580 717 201 aa, chain + ## HITS:1 COG:NMB1237 KEGG:ns NR:ns ## COG: NMB1237 COG0353 # Protein_GI_number: 15677109 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Neisseria meningitidis MC58 # 2 201 4 203 206 315 77.0 2e-86 MNKKPDAFTRLINALKVLPNVGPKSAQRMAHQLLQHKREEAQELVDALQNALRLVHHCKL CNTFCEEELCGICSDSDRNPHRLMIVHMPADVSNMEAANCHDGLYFVLMGQISPAQGMDL SAVALDKLIERLQNSETEEIIIATNFTAEGDATAYVLAELFKNLPYKVSRLARGIPLGGE LEYVDAGTLAQAVYERRSIKE >gi|289656362|gb|ADEA01000005.1| GENE 124 124743 - 125027 384 94 aa, chain - ## HITS:1 COG:no KEGG:NMC1136 NR:ns ## KEGG: NMC1136 # Name: not_defined # Def: putative periplasmic protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 25 94 27 96 96 90 74.0 2e-17 MKFNKFLALTAAAGLAFSVNAYAAKEIKIASNNTPYSEADVQKLAATATGMGVKEPVSLN AAGGTVTVSGSSATKCTFKVGAGDTPQIQGVSCK >gi|289656362|gb|ADEA01000005.1| GENE 125 125237 - 126487 1389 416 aa, chain + ## HITS:1 COG:NMA1403 KEGG:ns NR:ns ## COG: NMA1403 COG4591 # Protein_GI_number: 15794315 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ABC-type transport system, involved in lipoprotein release, permease component # Organism: Neisseria meningitidis Z2491 # 1 416 1 415 415 659 81.0 0 MASLETWIGLRYLRAKKRNGFMSFITMVSIAGIALGVMALIVVLSVMNGFQKEIRGQLLN VAPHAEIGYYDNGGGENWQNLRQFVKGKKEVLASAPYVSDQALLANAGEVRGVQIRGILP DEEKNVVDYGDNMPSGSFNDLKPGGFDIILGEGLAEALGTEKGGKVTVITPEGNVTPAGV VPRLKQFNVVGIVKTGVYEVDNSLALTHIKDAQVLYRLGENVGGLRLKLAHPQNAPDFIA NLIPAGQQDKVWVRDWTFNNRSYFEAVELEKRMMFIILTLIIAVAAFNLVSSLVMAVTEK QADIAILRTLGLAPGGVMKIFMVQGAFAGFFGTLTGVVFGVALGMSVGQIVKFFEELFGV HLINSQIYFIDYLPSDVNARDVAVIALISLTLSFIATLYPSWRAAKTQPAEALRYE >gi|289656362|gb|ADEA01000005.1| GENE 126 126480 - 127169 255 229 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 22 205 35 221 329 102 30 1e-20 MNNVILKCEKVVKKYDDGALSVQVLNGLDLEVSQGQSVSIIGSSGSGKSTLLHILGGLDR PSEGRVVLMGSDLGQLNQKQLGHLRNQYLGFVYQFHHLLPEFSALENVMMPLLIGKKPKA EAEAQAVAMLEKVGLAQRVLHRPSELSGGERQRAAIARALVTRPKCLLADEPTGNLDRKN AQNVLDMMLDLKNELNTSLIVVTHDDELAVRFERVLTMKDGHLHDKTQA >gi|289656362|gb|ADEA01000005.1| GENE 127 127272 - 129020 1108 582 aa, chain + ## HITS:1 COG:NMB1233 KEGG:ns NR:ns ## COG: NMB1233 COG0507 # Protein_GI_number: 15677105 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Neisseria meningitidis MC58 # 6 582 4 578 581 618 59.0 1e-177 MNNSVEKNDLNQSAAQSALDFLQRFAPAEAGMAEPYVLRLFAALQDGHSYIRLTDDEAEQ LASAENIVGRQGGMPLVMQGRRLFLGRMWQLERDLAAEICRLAHPSAEKVDWMQAAQNLH SWFADKGSEGQRDAAALALLQSFMLITGGPGTGKTTTVAKLLGLICSNSRQLPRIALAAP TGKAAAHMARALHRALDGFSLPEKIYSHLVQLEGQTVHRLLELRPPQMQSAYNRWRPLPY DVLVVDEASMLDTSLLLQLLRAVPDGCRVIFLGDEHQLPSVGAGAVLAALSQNTVLSSET AGKLAEYLPEHGFLVDDEKAVPLSQNSARLTVSHRFGADSGIGCLARAVIAKDAESAWAQ FGRFPQELEVMQADVKKQAELLYQRHEKYWQAVDSGNVALAYGHAADVAVLAAWRKDAEI FNETYCRHLQRFGRATEETPWFAGQIIMVTRNDYIQDLFNGDIGLIMPDAASANGLAAYF PDIEGFRKTAASRLPAHETAFAMTVHKSQGSEYREVWLVPPSVASVHDEDSLSGLNNALL YTGITRARKRFVFFGSKQEMTAAVETVRIRRTALYDMVNSLF >gi|289656362|gb|ADEA01000005.1| GENE 128 129372 - 130493 897 373 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298368791|ref|ZP_06980109.1| ## NR: gi|298368791|ref|ZP_06980109.1| hypothetical protein HMPREF9016_00458 [Neisseria sp. oral taxon 014 str. F0314] # 1 373 1 373 373 675 100.0 0 MKNQKKLACTLAVLAAFPLAAAAETADGGKDSTSLATTNDYVNSGSIVRKDDDKISIFNE LLTVNGTFRVRVDNKDINANNSTSNPTPKNTNSNFNAEFWLRAKLYKDWKLVSQIEPNID LETGKFNGDHDVPMNKLYAEGTVYNNIKARVGKFGAFSSYGRVWDTEVTGGELFFDNKVL PTKIMAGRRTGNLNDNVWGIGGRRKHFASVQSKLPINEKINVGATVSYMKDLDVRGSKKN AVFGEIGTDIKFNDDWYWMAAVSKSNIKAYNDAGQKIKNDGIFTEVRYKLADWKERNSYD VFLNYRRVGSLSGVSSVEDYSKNVQGVQIGATYIPWKNWKLKGFYLAGKQVTPTVGTEKQ DVNVIRGQLEYNF >gi|289656362|gb|ADEA01000005.1| GENE 129 130577 - 130978 366 133 aa, chain - ## HITS:1 COG:NMA1348 KEGG:ns NR:ns ## COG: NMA1348 COG1188 # Protein_GI_number: 15794270 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) # Organism: Neisseria meningitidis Z2491 # 1 133 1 133 133 183 75.0 9e-47 MKNDHDTGTMRLDKWLWAARFFKTRALAQKHIELGRILVNGMKVKNSKNITVGDTIDLTL NSLPYKIKVTALNHQRRPAPEARLLYAEDMDTAARREQQRLLDQASRVSAAYPDGRPTKR DRRQLDRMKRESW >gi|289656362|gb|ADEA01000005.1| GENE 130 131179 - 132138 824 319 aa, chain + ## HITS:1 COG:NMA1349 KEGG:ns NR:ns ## COG: NMA1349 COG0825 # Protein_GI_number: 15794271 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase alpha subunit # Organism: Neisseria meningitidis Z2491 # 1 319 1 319 319 567 89.0 1e-162 MKPVFLDFEQPIAELTNKIDELRFVQGESAVDISDEIARLQKKSNDLTKSIFSKLTPAQI SQVSRHPQRPYTYDYINTLFTDFEELHGDRHYADDHAIVGGLARFNGQSVVVVGHQKGRD TKEKIRRNFGMPRPEGYRKALRLMQTAEKFNLPVMTFVDTPGAYPGIGAEERGQSEAIGR NLYELTRLRVPILCTIIGEGGSGGALAIAVGDYVNMLQYSTYSVISPEGCASILWKTAEK AADAAQALGITAKRLLDLGLIDRIINEPLGGAHRDMQTAMKNVKAVLEEQLREAQSIPMA DLLSRRFDRIMAYGQFTEK >gi|289656362|gb|ADEA01000005.1| GENE 131 132220 - 133536 792 438 aa, chain + ## HITS:1 COG:NMA1350 KEGG:ns NR:ns ## COG: NMA1350 COG0037 # Protein_GI_number: 15794272 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control # Organism: Neisseria meningitidis Z2491 # 15 424 9 418 426 413 49.0 1e-115 MDLLECLFMNETPSLSGKDIEVGLSGGLDSVVLLHMLSRLRQQHGFSLRAVHVHHGLSPN ADDWAEFCLDYCNRLSIPIRIAHVRVKKGNSGIEAAARAERYRVFSDGLSDILALAHHQD DQVETFMLAVVRGGGLRSLAAMPQQRDLNAETKIWRPLLPFTRSDLQHYAELHHLDFIED ESNKDSAYLRNWLRNEALPAWRGRIPHFDRHILSNIRSLQEDLELLDEIVRQDYEFVYGG GRFSVAKWRDLGSRRRRHVLRHFVLQHGLGTPSQSSISDFERVLMESDKAEWKLPAGTVY LYRGSLFPLLRQKMDKISKSKGKVIRGRLKDILLDNGFVLQPSPFGLSEELLAQEGIVRN MNNNDVIKLDCGTKPVKKVLQEYHILPLVRKSWPIIINADKECVAVANLRAGVDFQVENG VIPVFFEYQEYITELNYK >gi|289656362|gb|ADEA01000005.1| GENE 132 133607 - 134206 387 199 aa, chain + ## HITS:1 COG:RSc1055 KEGG:ns NR:ns ## COG: RSc1055 COG1595 # Protein_GI_number: 17545774 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Ralstonia solanacearum # 1 199 1 199 199 229 58.0 2e-60 MNDRKIDQMLVERAQQGEQKAFEMLMSKYQRRLFRLITRFVKDEHDVNDVAQEAMIKAYR ALPGFRGESAFYTWLYRIAINTAKNFLITSGKRPFVSAEAANEEGDVLDLSDQVADYHTP EAEMVNREILQTVEAAISKLPDDLRKAITLREMDGLSYEEIAQIMDCPIGTVRSRIFRAR EVIAKDLRPLLDTSENQRW >gi|289656362|gb|ADEA01000005.1| GENE 133 134209 - 134805 604 198 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298368796|ref|ZP_06980114.1| ## NR: gi|298368796|ref|ZP_06980114.1| sigma-E factor negative regulatory protein [Neisseria sp. oral taxon 014 str. F0314] # 1 198 4 201 201 332 100.0 1e-89 MQTTINDKFEYISIAMDDDCLSEEILDKLLADKEASQKWYEYHLIGDCLRSRKEGMGKDF DFAQSSNFMATLAEISLENKRLYEAGQIKPVKDLPVQASNHAFKGFAIAASVAAVAVSVW QLLPQTEQADVAPVAVEQQRPARAEVVEVSGKPDAKSASAPVVAPVMPSNVEEKPKSQSA VHIESQHVSQQRQQTIVD >gi|289656362|gb|ADEA01000005.1| GENE 134 134925 - 135722 785 265 aa, chain + ## HITS:1 COG:NMA1351 KEGG:ns NR:ns ## COG: NMA1351 COG0566 # Protein_GI_number: 15794273 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylases # Organism: Neisseria meningitidis Z2491 # 4 263 1 260 261 290 57.0 2e-78 MQPMKLITSAQNDRLKYLSKLLSQAKARRASGQTVLEGVHLLQAYLQAGLTPVQVYIPES KLQQREILALIAALPEQAVTSVANAALSRITSLSEADDIMTLINIPAQDAWPVNGDCVVL DRIQDPGNVGTVMRSAAAAGVGCLVVGIGSADVWSPKVLRAAMGAHFLLKIHTEVRLAQW ISSYRDKVWATALHHQNNHNLYNLDLHQSAAWIFGNEGSGVDDNILDQVSGCVRIPMAGK TESLNVAMAATVCLFEQMRQRQAEQ >gi|289656362|gb|ADEA01000005.1| GENE 135 135782 - 136444 919 220 aa, chain + ## HITS:1 COG:NMB1071 KEGG:ns NR:ns ## COG: NMB1071 COG3318 # Protein_GI_number: 15676955 # Func_class: R General function prediction only # Function: Predicted metal-binding protein related to the C-terminal domain of SecA # Organism: Neisseria meningitidis MC58 # 5 218 6 219 220 321 71.0 5e-88 MQHHFDEHSRKRLMELLDEKSLTHNTMRSDEVQGFMMALLSGPDALTPEDWLPEVLGEEA LFEAKERTEVERLVLALAVDMRRQMSDKHLPDLWLYEDNAGNPDFYTWCNAYLYALEVVP TNWFETVNQEEFEDLFYPIMALGGIYDEEENGEIVLHLTDSELTELESDLPHTLLDIYFY WQAIINKPKTVRRTEAKVGRNDPCPCGSGKKYKACCGKLS >gi|289656362|gb|ADEA01000005.1| GENE 136 136511 - 137002 890 163 aa, chain - ## HITS:1 COG:NMB0932 KEGG:ns NR:ns ## COG: NMB0932 COG2839 # Protein_GI_number: 15676826 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 1 162 1 162 162 120 51.0 1e-27 MTTILILLGLIAVLVGLLGTIYPAIPGLGLMFGGAWLLAYAGNYQVYGTNTLIFIGIAAA FGMAMDYVSGVLGAKYTGASKQALWGAFIGGITGAFLSLPGLLLGPLVGAGVGEFIAKRD MLQAGKVSLGTFIGFIIGMIAKVGCALAIVLTLLSVWIFNLFT >gi|289656362|gb|ADEA01000005.1| GENE 137 137033 - 137992 1544 319 aa, chain - ## HITS:1 COG:NMA1465 KEGG:ns NR:ns ## COG: NMA1465 COG0037 # Protein_GI_number: 15794367 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control # Organism: Neisseria meningitidis Z2491 # 1 319 1 319 319 631 96.0 0 MSKKNKQELENNKLSKRLRHAVGDAINDFNMIEPGDKIMVCLSGGKDSYALLDILRQLQA SAPIDFELVAVNLDQKQPGFPEEVLPTYLESIGVPYKIVEEDTYSTVKRVLDEGKTTCSL CSRLRRGILYRTAKELGCTKIALGHHRDDILATMFLNMFYGGKLKAMPPKLVSDNGEHIV IRPLAYVKEKDLIKYAELKQFPIIPCNLCGSQPNLQRQVIGDMLRDWDKRFPGRIESMFS ALQNVVPSHLADPELFDFVGLERGQALKHGGDLAFDSEKMPERFSDGLEEDGSEIKIEPQ KAERKIINILANKPKTCGA >gi|289656362|gb|ADEA01000005.1| GENE 138 138119 - 138973 1506 284 aa, chain - ## HITS:1 COG:NMA1273 KEGG:ns NR:ns ## COG: NMA1273 COG0682 # Protein_GI_number: 15794204 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Prolipoprotein diacylglyceryltransferase # Organism: Neisseria meningitidis Z2491 # 1 280 1 280 283 464 85.0 1e-131 MMIHPQFDPVLISIGPLAIRWYALSYIVGFMLFLWLGRRRIAQGNTLFTREMLDDFLTWG ILGVIIGGRLGYVLFYKFSTYIDHPLDIFKVWEGGMSFHGGFLGVLAAMWLFSRKHKISF LKTMDFVAPLVPLGLASGRIGNFINGELWGRVTDINAFWAMGFPQAHYEDVEAAAHNPLW AEWLQQYAMLPRHPSQLYQFALEGICLFIVLWIFSKKTRPDGQVASLFLAGYGFFRFLAE FARQPDDYLGLLTLGLSMGQWLSVPMIVLGAIGFVWFGRRGKAA >gi|289656362|gb|ADEA01000005.1| GENE 139 139063 - 140193 1835 376 aa, chain - ## HITS:1 COG:NMA1274 KEGG:ns NR:ns ## COG: NMA1274 COG2866 # Protein_GI_number: 15794205 # Func_class: E Amino acid transport and metabolism # Function: Predicted carboxypeptidase # Organism: Neisseria meningitidis Z2491 # 1 375 1 375 376 723 91.0 0 MIKISTQFDAGSVTVKDSSDPDNIRLALRPDNASHFAQWFYFRLQGAAYQNCVMHFENAA DAAYPQGWEDYQACASYDRQNWFRVPTTYENGVLAINHTPLSNSVYYAYFEPYSYEQHLN LLGDAQGSGLCRIDDLGSTVQGRDINLLTIGNQAESDLKIWIIARQHPGETMAEWFVEGL LGRLLDPQDPTARTLLDRATFYIVPNMNPDGSVLGNLRTNAAGANLNREWENPTLEKSPE VFLVREKMLETGVDLFLDIHGDESLPFVFVAGTEGVPNYNPRIAALETQFKTALLSASPD FQDEYGYEKDAPGQANMTLATNWVGNRFSCLAFTLEMPFKDNLNLPDDDFGWNGQRSLRL GEAMLSAVLQISADLS >gi|289656362|gb|ADEA01000005.1| GENE 140 140228 - 140698 631 156 aa, chain - ## HITS:1 COG:mll3540 KEGG:ns NR:ns ## COG: mll3540 COG2110 # Protein_GI_number: 13473056 # Func_class: R General function prediction only # Function: Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 # Organism: Mesorhizobium loti # 1 148 5 153 155 165 58.0 4e-41 MKSIRGNLLALARSGRFDVIVHGCNCRHAMGAGIAKQIKDSFPEAWAADLATPAGAEKLG QISTAETDCDGHRLTVVNAYTQDDWQGDGVLLDYDALRRAMREVKRRFGGKRIAYPKIGA GLARGDWSKIAAIIDEELAGETHTLVEYGDTDTEAV >gi|289656362|gb|ADEA01000005.1| GENE 141 140882 - 141769 1665 295 aa, chain + ## HITS:1 COG:NMA1275 KEGG:ns NR:ns ## COG: NMA1275 COG0548 # Protein_GI_number: 15794206 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate kinase # Organism: Neisseria meningitidis Z2491 # 1 293 1 293 298 419 78.0 1e-117 MNKTEHLSPAAKAEILSEALPYIRRFSGCTIVIKYGGNAMTEPRLKEGFAKDVALLKLVG INPVVVHGGGPQINDMLGKIGKEGEFVQGMRVTDGETMDIVEMVLGGHVNKEIVSLINNH GGKAVGITGRDSHFIRARKLLLETPEGGQADIGQVGEIESIDTSLIKDLISLGRIPVVAP IGVGRHGEAFNINADLVAGRLAEELSAEKLLMMTNIAGVIDKQGRLLTNLTPMRIEGLIA DGTLYGGMLPKISSALEAATNGVKATHIIDGRVPNALLLEIFTDSGIGSMILGQD >gi|289656362|gb|ADEA01000005.1| GENE 142 141845 - 142291 340 148 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298368805|ref|ZP_06980123.1| ## NR: gi|298368805|ref|ZP_06980123.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 148 1 148 148 290 100.0 2e-77 MNKTALCIPLFLFTLPVYAGKTSYNKPEYWRLIHSDPAQGKSIYGNTFVRSLSPGNSIIE IRYEKPKPIIPNETINGRSRIIGKDYVKTRFKFQIDCKNKEISYEESAFFDSKGKLSAYE ILPVEELKWHKIKIGSTAEKFYRFTCEF >gi|289656362|gb|ADEA01000005.1| GENE 143 142375 - 144372 2782 665 aa, chain - ## HITS:1 COG:NMB1442 KEGG:ns NR:ns ## COG: NMB1442 COG0323 # Protein_GI_number: 15677300 # Func_class: L Replication, recombination and repair # Function: DNA mismatch repair enzyme (predicted ATPase) # Organism: Neisseria meningitidis MC58 # 1 665 1 658 658 1087 87.0 0 MSRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDADATAIEVELAGGGIRLIRVSDN GGGIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQDGSAH ATQVKAEDGKLSNPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLAL AHPHIAFSLKRDGKQVFKLPAQNLHERIAAIVGEDFQAAASLEIDSGNGALRLYGAIAKP TFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNVH PTKTEIRFRDSQQVHQLVFHTLNKALADTRADLTESVGNAGEVLHEITGIRPAATSSENE HSGFHPNPTASSENIFAAAPSAHTSEPRNAFSSGKTAPMPYQAARAPQQRSLSLRESRAA LNTYAELFKNTAADEADIELAQFEQARFGSTSATSSENSARSFSDDPKPELPPLGFAIAQ LLGIYILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGNLQSQRLLIPVTFAASHEECA ALADHADTLAGFGLELSDMGGNTLAVRAVPAMLGKADVVSLAKDVLGELAQVGSSQTIEE HENHILATMSCHGSVRAGRQLTLPEMNALLRDMENTPRSNQCNHGRPTWVKLTLKELDAL FLRGQ >gi|289656362|gb|ADEA01000005.1| GENE 144 144487 - 145326 961 279 aa, chain - ## HITS:1 COG:PA3628 KEGG:ns NR:ns ## COG: PA3628 COG0627 # Protein_GI_number: 15598824 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Pseudomonas aeruginosa # 2 277 4 281 283 266 46.0 2e-71 MSLKLLSRAKMFNGHQEQYRCFSETCRTDMSFGIYLPPQVLKGYPAPVLYFLSGLNSDSS ELIRQTGIQRFAAQWNIIVVFPDTSPRGSHISDSTDEFIGQGAGFYVDAVEQPWAAHYQM YSHISRELPDWVERHFPATQERSIAGFSMGGHGALSIALKNSSRYAAVSAFAPLCHPTAS RGGKQAFAAYLGKESDAWQAYDSTSLVQTASRKLPILIDQGGADPLFPDELQPEAFVNAA RANGFNVQYKVRPGYGHNYFFIASFIDSHIEFHAEALGL >gi|289656362|gb|ADEA01000005.1| GENE 145 145535 - 145738 110 67 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPNGNTKRTFLSESHFFIMAAHLIRIAQKKAARQPVNPFLYTIFHYLVLLENLFRRCFFS SNYYATN >gi|289656362|gb|ADEA01000005.1| GENE 146 146204 - 147913 2802 569 aa, chain + ## HITS:1 COG:NMB1339 KEGG:ns NR:ns ## COG: NMB1339 COG0442 # Protein_GI_number: 15677205 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Prolyl-tRNA synthetase # Organism: Neisseria meningitidis MC58 # 1 568 1 568 570 1098 96.0 0 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDA YCRIFTRLGLEFRPVAADTGSIGGTDSHEFQVLAESGEDVIAYSDTSDYAANVELAPTLP LKGERAAAQAELTKVHTPNVKTIDSLVDFLSIPIEKTLKSIVVEGENEGEIVLLLLRGDH EFNDIKAEKLAGVKSPLTMADPAAIRAQFGANGGSLGPVGFTGKVYADFATEKGADWVIG ANEDDYHYTGFNFGRDAAEPEFVDLRNVVEGDESPDGQGRLKLARGIEVGHVFQLRDKYT QAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDEKGIIWTKAMAPFEVVIVPMN YKKSDAVREAADKIYTELLAAGADVLLDDRDERAGVLLNDSELLGIPHRIVIGDRALKEG NVEYAERRDNEAQTVPTDEIAAKVLAALK >gi|289656362|gb|ADEA01000005.1| GENE 147 148012 - 149364 1643 450 aa, chain - ## HITS:1 COG:NMB0877 KEGG:ns NR:ns ## COG: NMB0877 COG1686 # Protein_GI_number: 15676773 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Neisseria meningitidis MC58 # 62 438 18 383 389 356 49.0 4e-98 MKKTLLSLILAALTAGNAAAAPQQAAPAKNQAASAPAAAKEAKPADRPASAPASKTASEP ANQTASAAGAEARPSGALSPAAVPQIAATAFIVKDLQSNQVLAANNPDNLIEPASLTKMM TAYLTFKALEDGTLKADEMLTVSDAGWHTEGSRMFLNPHVPVSVSDLLKGMIVQSGNDAA ITLAEAIGGIGNDSEQTETPKPPLENFVAMMNMEAKRLGMNHTRFNNPTGLASERHLSTV SDLALLAAALIRDYPKYYPIFSLKSFRYNGIEQPNRNLLLFRDSSVDGLKTGHTESAGYN LAASSNRNGRRIITIVVGAESTEARASESGKLLNWALQAFDTPKLYDAGEVISQVKVYKG SANAVKIGFADDTYITIPHGSGHRIRPVLETEQPVLAPIEKGSILGKLKIMNGKEVLAEK NVVALTSVEEDNWFGRTWDSIVLWFKSVFG >gi|289656362|gb|ADEA01000005.1| GENE 148 149614 - 151143 1964 509 aa, chain + ## HITS:1 COG:NMA1096 KEGG:ns NR:ns ## COG: NMA1096 COG1171 # Protein_GI_number: 15794044 # Func_class: E Amino acid transport and metabolism # Function: Threonine dehydratase # Organism: Neisseria meningitidis Z2491 # 2 509 1 508 508 863 85.0 0 MMNTRPSYSDYLIRILTASVYDVAVETPLEQARSLSGRLKNNILLKREDLQPVFSFKIRG AYNKMAKLPKESLARGVIAASAGNHAQGVALSAQRLGCRAVIVMPETSPQIKIDAVKNRG AEVVLKGVSYNDAYDHAMELAAKDNLTYIAPFDDPDVIAGQGTVGMEIVRQRADKINAVF VPIGGGGLAAGVAAFIKQVRPDIKVIGVQTNDSCGMKQSVEHGSVVHLKDVGLFSDGTAV KVVGDETFRLCRDLLDEIITVDTDAICGAIKDIFDDTRSIMEPAGALALAGLKAYIQRNG VEGQTLVAVTSGANINFHRLRHVSERSELGEGNEGIFAVTIPEQPGSFLKFINLLGNRSI TEFNYRYGDDKNAHIFVGIQTAGSRDLAVISQQLAAAGLPNQDLTDDEIAKIHIRYMVGG RTDKVQNERLISFEFPERPGALARFLNHMQSDWNITLFHYRNHGADYGRILVGIDVPPKD GQAFEQFLERLGYFYQDETRNAAYKLFLA >gi|289656362|gb|ADEA01000005.1| GENE 149 151218 - 151418 260 66 aa, chain - ## HITS:1 COG:no KEGG:NMO_0837 NR:ns ## KEGG: NMO_0837 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 1 66 49 114 114 93 75.0 2e-18 MIGRLLRLFFFFALIALVIHRLCSRRQKRTLREIASISAWVLIGASAATLVWYLILLYFK HIPDSY >gi|289656362|gb|ADEA01000005.1| GENE 150 151540 - 152679 1401 379 aa, chain + ## HITS:1 COG:NMA1136 KEGG:ns NR:ns ## COG: NMA1136 COG2021 # Protein_GI_number: 15794082 # Func_class: E Amino acid transport and metabolism # Function: Homoserine acetyltransferase # Organism: Neisseria meningitidis Z2491 # 1 378 1 378 379 688 86.0 0 MSKNTSAAFGVPQKIPFETPLPLENGQNLPRFDLMIETYGMLNAEKSNAVLICHALSGNH HVAGRYSAEDKYPGWWDSMVGPGKPIDTERFFVVGLNNLGGCHGSTGPLSQNPETGRDYG ADFPLVTVKDWVKSQALLADYLGIRQWAAVVGGSLGGMQALQWTISYPERVRHALVIASA PKLSTQNIAFNDVARQAILTDPDFNEGHYARQGKTPTRGLRIARMMGHITYLAEDGLGKK FGRDLRSNGYQYGYDVEFEVESYLRYQGDKFAGQFDANTYLLMTKALDYFDPAADFGGNL TRALQDVQARFFVASFSSDWRFSPERSKELVKALIAAAKPVQYIEVKSFHGHDAFLMEDE AYIRAVRTYMNNVHRELQP >gi|289656362|gb|ADEA01000005.1| GENE 151 152676 - 153257 671 193 aa, chain + ## HITS:1 COG:NMA1135 KEGG:ns NR:ns ## COG: NMA1135 COG0500 # Protein_GI_number: 15794081 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Neisseria meningitidis Z2491 # 1 193 1 193 193 362 86.0 1e-100 MNLRDDLQLIYDWIPAGSRVLDLGCGNGELLAALVGHKECSGYGVEIDTDSVIEAMSRGV NVIQADLEQGLEEFGDNTFDVIVLSQTIQSMQNTEMILRGLMRVAKQAVVTFPNFGYWRN RFQIALGGHMPVSERMPYHWYNTPNIHWCTLKDFDLLCAKNNIRVLERAVMAGNKRVRHL PNLLGSLAFYRVG >gi|289656362|gb|ADEA01000005.1| GENE 152 153341 - 153829 680 162 aa, chain - ## HITS:1 COG:no KEGG:NMCC_1426 NR:ns ## KEGG: NMCC_1426 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_053442 # Pathway: not_defined # 1 158 1 156 156 235 76.0 4e-61 MYDVNTHDVRHFFAHVWQHRFSPLQLDGLQQKALRIIEAHPEYGPYLEDIEQYLDKEWRP EDGEGNPFLHMSLHLSLQEQAAIDQPPGIRAIHHRLCARHGGDWVRAEHEMMDALAETLW EAQRYGRGLDVNAYMTRLRKLIGLGPEEQARINPHEVASKSE >gi|289656362|gb|ADEA01000005.1| GENE 153 154461 - 155465 1127 334 aa, chain + ## HITS:1 COG:CC3180 KEGG:ns NR:ns ## COG: CC3180 COG1816 # Protein_GI_number: 16127410 # Func_class: F Nucleotide transport and metabolism # Function: Adenosine deaminase # Organism: Caulobacter vibrioides # 4 323 12 331 344 402 61.0 1e-112 MPHSALIRALPKAELHVHIEGTFEPELMFEIARRNGVRIPYADVDEVRAAYDFHNLQSFL DIYYAAAAVLLHERDFYDLTRAYLLRCREDNVVRTEIFFDPQTHTARGVAFETVLNGIRR ACDDAHKEWGISSVLIMCFLRHLSEEDAFETLAQAMPYREHIIGVGLDSSEVGHPPSKFQ NVFAAARQAGFLTVAHAGEEGPPEYVYEALDLLKVSRIDHGVRSEEDAALMRRLIREKMP LTVCPLSNLKLKVVGNLSEHNLRRMLQNGVLVTVNSDDPAYFGGYVNQNFIELAAALDLT ENDIRTLCKNSFAASFLSSEEKAAWCAAVDSCLT >gi|289656362|gb|ADEA01000005.1| GENE 154 155481 - 155684 365 67 aa, chain - ## HITS:1 COG:NMA1685 KEGG:ns NR:ns ## COG: NMA1685 COG1942 # Protein_GI_number: 15794578 # Func_class: R General function prediction only # Function: Uncharacterized protein, 4-oxalocrotonate tautomerase homolog # Organism: Neisseria meningitidis Z2491 # 1 67 1 67 69 99 83.0 2e-21 MPYANIKVTGGSEAPTAEQKAELIAGVTELLARVLGKNPETTVVVIDEVDMENWGIGGES VAVRRRK >gi|289656362|gb|ADEA01000005.1| GENE 155 155873 - 156472 982 199 aa, chain + ## HITS:1 COG:NMB1963 KEGG:ns NR:ns ## COG: NMB1963 COG2854 # Protein_GI_number: 15677793 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: ABC-type transport system involved in resistance to organic solvents, auxiliary component # Organism: Neisseria meningitidis MC58 # 9 194 14 192 196 112 37.0 5e-25 MNRYLSAFILAAPMAVVAPYAAAQSHPAQVQAQQNIDTVLKIARDSSLSEQQKIKQIENY ANRYLDYERISALAVGAPWREFTDKQKSEFINAFKEMIIGMYSHSALVGAADAQVKLLPK MTANGNKFDVFSEIQTKSGAKYEVAYQLYQSGPVYKVYNIRLDGASLVTIYRNQFAELIK QKGIDGTITTVKAKGLKKQ >gi|289656362|gb|ADEA01000005.1| GENE 156 156536 - 157786 1923 416 aa, chain - ## HITS:1 COG:NMB1241 KEGG:ns NR:ns ## COG: NMB1241 COG0617 # Protein_GI_number: 15677113 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA nucleotidyltransferase/poly(A) polymerase # Organism: Neisseria meningitidis MC58 # 1 407 1 408 417 755 92.0 0 MKTYLVGGAVRDYLLGLPVKDRDWVVVGADAQTMLAQGFQPVGKDFPVFLHPDTHEEYAL ARTERKTAKGYAGFSFHADKDVTLEQDLMRRDLTINAMAQDSDGLIDPFGGQQDLAAGIL RHVSPAFAEDPVRILRTARFAARYGFEIAEETMRLMRQMVENGEADALVAERVWQELAKG LMEKNPRRMIEVLRECGALKVLLPEVDALFGVPQRADYHPEIDSGIHTLMTLQRAADMGL SLPERYAALLHDLGKAKTPPDILPKHHGHDLAGVEPVREVNQKLRAPRHCAELAELVCRW HIMFHQVGQLKSKTILKVLQKTDAFRRPERFAAALNVCIADTQGRLNREHTPYPQRAHWL ALLEAANQVDSGKIAAECRTQGKAHLIAEQIDRARLERIAPLQKAYQLDSADLSHY >gi|289656362|gb|ADEA01000005.1| GENE 157 157844 - 159154 2242 436 aa, chain - ## HITS:1 COG:SP1213 KEGG:ns NR:ns ## COG: SP1213 COG4487 # Protein_GI_number: 15901076 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 1 432 1 422 424 365 55.0 1e-100 MHEIKCPHCHTAFTVNEASYADILNQVRTQEFQTEIHERLQQAQMQFQSDMQLAQAQAQN QFDKILADKNHEIAALSNQINAYEKDSKLAAAEIEGRLKAQIAEQDKLIAELKAQAKSLE TAKNMEKELEITKAVAEKERELGNLNTQLMLQSKENQLEKQSLREKYEAELKQKDETIAF YKDFKARQSTKMIGESLEQHCETEFNRIRTTAFPQAVFGKDNDAKTGSKGDYIYRETDEE GNEIISIMFEMKNENDETATKKKNEHFFKELDKDRKEKNCEYAVLVSLLEADSVLYNNGI VDVSYAYPKMYVVRPQFFIPIVSLLRNAALNSLKYKQELAQMRAQNIDITHFEEDLDKFK TDFARNYELASRKFQTAIDEIDKTISHLQKTKEALLSSENNLRLANNKATDLTVKKLVRK NPTMKAAFAALEKKED >gi|289656362|gb|ADEA01000005.1| GENE 158 159285 - 161054 2539 589 aa, chain - ## HITS:1 COG:HI1467 KEGG:ns NR:ns ## COG: HI1467 COG4178 # Protein_GI_number: 16273371 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease and ATPase components # Organism: Haemophilus influenzae # 4 583 3 581 589 599 50.0 1e-171 MQKWQTELYSTPSWLLQTLLMVAAASAVILFLARKTRFGREFAYILRLCLTPKSAVKVLL LITAMIALLLTEVRLNVLSTFMSKGLYDSMQDLNASAFWMFAAMNAGVVLVRAFNNVVND FLDQGLAIKWSERLNEVLTTRWLADKNYYRLQMRRHAPDNIDQRIQQDAQDFIASTIEFV RGMVNSVVTSLEFAVVLWGLAGILTVFGFDIPHGIVWFVYMFVILATFIAMWIGNPLIRY NYENEKLNGDYRYSLIRVRDHAESVAFYSGEKHEHDQLADRFKAIIRNRWRIARQSVCLS GFNDMFTNGIKLFPIILQAPRLFAGQIKIGDIQQTVQAFARLQNALSFFRMFYNKFTAYR ARLERLYGFLLSTEEQHSAQQPDITEVSDDLSLENVALFRHNGEILLSGINVNLKSGDSL LIRGPSGCGKTSLLRALAGLWPFGSSGKVSRPPHQDILFLPQRPYTAQGSLRDAICYPNI DKQHPELAEAMNTCRLDYLIDKLDKTDDWQHKLSPGELQRVAFVRALLSQPKVILLDEAT AALDEPTEALLYRALKQKLPQSIIISIGHRSTLNEFHDFQLDVGNVACD >gi|289656362|gb|ADEA01000005.1| GENE 159 161307 - 163538 2621 743 aa, chain + ## HITS:1 COG:NMA1558 KEGG:ns NR:ns ## COG: NMA1558 COG1629 # Protein_GI_number: 15794451 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Neisseria meningitidis Z2491 # 71 743 1 706 706 1049 80.0 0 MKSRLALMPLLIMSTFSYAAEETAATTATNAQQTELQQVEVRADAKRVKAARSYSIASDG DLRDRVNLGVLGKANAFTAPITVVNYDEQALNNTEARTLVDAVAKKDASVWQFGGESNTL TGLYFRGYQLDARQFSVNGLAGMYGTQGTASVQVGSAQLIKGASTAVNGMDPEGAVSGSV NIETKKAADEGNRKIGLGWFSNNRAQGTFDLGQRFGENKEFGVRANGKLRHGDTPRHGYS EDNKEFALNADYRGETLRVAFDSIYAKRKTNGGRARMQDIQNANGRLFDAPEGKVNLAPS WQAQNTRGQTNMLTFEWDAFENAQITGGIGYNNARYYGNFASPTVTSSGLTYNSGRARLT DQRFKTLSMNLTARGEFETGPVSHNWSTAFDRIDRKRTTYQGARQTRSSVIDPSLDIPTQ LAKLDSNLGSAWSATPSLDTVIKVNSLAVSDTLGFADNKYRLTLGGRFQAVEQKNKLNGR KADANRFSPMLMAAWVPQPDLVVYGNYMEDLEPSDIRTDDDGHVTMADPRVSRQFEVGVR KNWGDFVTTLNAFQIKRPGYWFGNTTSGTDFAARKNAGLAYSGSEQGMERSRGIEFNTYA NLLNKTLRPSFGLMYLQSTVKDYPNYADNLVNGVQVANPRVIAKAGVEWDTPFAKGLTLN GNVSYFGKSYQDTQKQYAFPSYTLVDVGARYKTKLGKNTLTVSSSVENLFNKNYWQVQRG QYDRSFAVVGMPRTYWLKAELDF >gi|289656362|gb|ADEA01000005.1| GENE 160 163618 - 164649 632 343 aa, chain - ## HITS:1 COG:NMA1412 KEGG:ns NR:ns ## COG: NMA1412 COG2255 # Protein_GI_number: 15794324 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, helicase subunit # Organism: Neisseria meningitidis Z2491 # 1 341 1 341 343 588 89.0 1e-168 MLQTDNLSADRTQRIITAQNLSSQEELLERALRPKTLNDYIGQTKAKDQLAIFIQAAKKR GEALDHTLLFGPPGLGKTTLAHIIAKELGVNLRQTSGPVLERAGDLAALLTNLEPHDVLF IDEIHRLSPVVEEILYPALEDYQLDIMIGEGPAARSVKIDLPPFTLIGATTRAGMLTNPL RDRFGIVSRLEFYEDKDLATIVSRSAQLLQLNMGSDGAMEVAKRSRGTPRIANRLLRRVR DYADVKNNGVIDAEIADAALIMLDVDAQGLDVMDRKFLEAILHKFGGGPVGLDNIAAAIG ESTDTIEDVIEPYLIQQGFLQRTPRGRVATERSYLHFGLKITE >gi|289656362|gb|ADEA01000005.1| GENE 161 164668 - 164976 93 102 aa, chain - ## HITS:1 COG:no KEGG:NGK_1117 NR:ns ## KEGG: NGK_1117 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 7 102 7 102 102 152 75.0 3e-36 MLHIDILQQKISNEDYRRLIIGNSKDFSENESNLLHEILNKFEFDVIQEQALVQAVIQQV RFDPNAFHIDSDDEDITGICPHCINPPMPPLRDYLAWREMRG >gi|289656362|gb|ADEA01000005.1| GENE 162 164968 - 165048 77 26 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKHDKYNVYYINKRNQSYLNDKFIKK >gi|289656362|gb|ADEA01000005.1| GENE 163 165473 - 167464 1232 663 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298368824|ref|ZP_06980142.1| ## NR: gi|298368824|ref|ZP_06980142.1| secreted protein [Neisseria sp. oral taxon 014 str. F0314] # 1 663 1 663 663 1167 100.0 0 MRTQNKLPIIHFVLTGICAAVLAACSSSNEVSDSARNLSIASNNINTGNTDKGNTDKGNT DKGNTDKGNTDKGNTDKGNTDKGNTDKGNTDKGNTDKGNTDKGNTDKGNKTNINKETSLL NKGIQDKLTTLKLSDVIKTEQFNQTEVNTGFIANNLGATPLLETAKGPHDYPTSHLLTSA YRKDKTKLLRPQTVILGGVATRYFTNYTDGYVAKRAGYDEIDTPLSAKNLIGVDKRNKNG ILVKNGRSVNILDQTASKLELDSVGGSRYTKWFNNFATNADNETELDKGRRVLTDVKYKL DANNNPVWTVTTEPSSGYQYAHSLNRYFNNNPDDELYVNQNGEYAYRFTLKKSTTFEVSA ESAKTHPERAEALKALGWSAGKQYHFAPGSYFMVTQKDGSLKIVADNGQMTQVSLYSVHV GIDDNKAFGAFQNKRVIAEMFSALNYGKTNEIRAIYTYDVGQANGFNQQYLSLNAWRYKN GDGTYGLNNPFNIGIFDRVATENGIVANVYDMKTKKGLSAKYTGVAYSSRDGKQDGIMNM TAQFHEPDIAYNNTVLSNNVTFNGEITNRRLDDKRNVYFASGNVKTGSGMPSASAGQKVS LVGRSQVAQNVTVWMEGKNPGENKVIYGQGNVRFAGPNAEEVGGLLKITTSHGENNIGFI GKR >gi|289656362|gb|ADEA01000005.1| GENE 164 167639 - 169054 416 471 aa, chain + ## HITS:1 COG:no KEGG:APJL_1741 NR:ns ## KEGG: APJL_1741 # Name: not_defined # Def: hypothetical protein # Organism: A.pleuropneumoniae_JL03 # Pathway: not_defined # 71 471 70 468 468 211 32.0 4e-53 MVTAETIANPETEADRQMERIQEMAIPKPPEVGTSLLNGVKASLNEHTQTLTLDDLAKQP ELAEPLLNQALQARNYIAAEQLLPIYRKWDGYDPILLDYAQGAIWRSQGKHQKAITLYRN ILVRHPNLVAVRLDLAAMLYEDKQTRNSQYEFDAAKKQGLPEDVLPTIALYENAMGQNKW QFSGSLSYTQDNNINNVSAEREIHLPQFGNLAFEKNSDYLPQKGHGFTYALSVDRDINLK NNHYFALSGDVDGVSYWNNHDYDDQTAKVSLGYKNKSFKTDSFVMPFLEKRRYGNHPYYT RTGVDLGVSRWIKPNLRLSANGTFAQKDYAYTKRQGKDYQIGFGATYLMNDKTYFLGGLN YARDKVENFAGSSSKRIGGYLGWGQIWGENFNSRLIINRYNERFDGKHYVFTDRHRTDNA VVTNLSLWHNKLSFLGITPRLNWRYANNNSNINELHSYTKNRVFIDFEKTF >gi|289656362|gb|ADEA01000005.1| GENE 165 169217 - 169606 221 129 aa, chain - ## HITS:1 COG:HI0017 KEGG:ns NR:ns ## COG: HI0017 COG3445 # Protein_GI_number: 16271992 # Func_class: R General function prediction only # Function: Acid-induced glycyl radical enzyme # Organism: Haemophilus influenzae # 1 129 1 127 127 189 76.0 7e-49 MIKGIQITGSTNNALLNSFWLLDDQTNETRCLVAKEESGFAADAVVSFSELGEVSYKEIP VDVHARPKVEGGQHLNVNVLTRETLEDAVANPDKYPQLTIRVSGYAVRFNSLTPEQQRDV ITRTFTNSL >gi|289656362|gb|ADEA01000005.1| GENE 166 169761 - 170915 414 384 aa, chain + ## HITS:1 COG:NMA1132 KEGG:ns NR:ns ## COG: NMA1132 COG4394 # Protein_GI_number: 15794078 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 3 384 1 380 382 498 62.0 1e-141 MAMESKKINCWLFCNVIDNYGDIGVSWRLAQCLYHELGWEVHLWIDDLNALHTLCPALPS VPCLFENVYIHQWQAGCAQDVISVNPPQVIIETFACNLPENVLCIIRKNKPLWLNWEYLS AEDSNERLHAMPSLQADGLRKYFWFIGFGERSGGLIRERDYNSLCLYNKIQFRRHLNLPE KSSSEWFLFGYYSPVWSKWLQMWQLDNRPITLLLAGHQIIDSLKTDGVLPIDVLTKDGDV FQTACVKLVKIPFVPQNDFDKLLHLSDGLIVRGEDSFVRAQFSAKPFFWHIYPQDEMVHL DKLHAFWEKAGVFYPKDVFAAHRLLSDELNGAMTLSDENRLQAWQILREQSFKWRQAAKG WQNFLFNQPSALEKLAKFVSNTLK >gi|289656362|gb|ADEA01000005.1| GENE 167 170953 - 171513 836 186 aa, chain + ## HITS:1 COG:NMB0937 KEGG:ns NR:ns ## COG: NMB0937 COG0231 # Protein_GI_number: 15676830 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) # Organism: Neisseria meningitidis MC58 # 1 186 1 186 186 343 96.0 1e-94 MKTAQELRAGNVFMVGNDPMVVQKSEYIKGGRSSAKVSMKLKNLLTGAATETIYKADDKF DVVVLARKNCTYSYFADPMYVFMDEEFNQYEIEAENIGDALKFIVDGMEDQCEVTFYEGN PISVELPTIIVREVEYTEPAVKGDTSGKVMKTARLVGGTEIQVMSYIETGDKVEIDTRTG EFRKRA >gi|289656362|gb|ADEA01000005.1| GENE 168 171589 - 172266 504 225 aa, chain - ## HITS:1 COG:NMB1244 KEGG:ns NR:ns ## COG: NMB1244 COG0036 # Protein_GI_number: 15677116 # Func_class: G Carbohydrate transport and metabolism # Function: Pentose-5-phosphate-3-epimerase # Organism: Neisseria meningitidis MC58 # 1 224 1 224 242 380 83.0 1e-106 MNTFRIAPSILSADFAKLGEEVSNVIGAGADLIHFDVMDNHYVPNLTIGPMVCSAIKPYA TVPVDVHLMVEPVDDLIQSFGKAGADIITFHPEASKHIDRSLSLVKSMGCQAGLVLNPAT PVNLIENVLDKLDMVLLMSVNPGFGGQSFIPHTLIKIRQVRGMLDNYESQTGRRIALEVD GGIKTGNIAEVAAAGADTFVAGSAIFSQPDYKAVIDEMRKELAKV >gi|289656362|gb|ADEA01000005.1| GENE 169 172545 - 172976 225 143 aa, chain + ## HITS:1 COG:NMA1414 KEGG:ns NR:ns ## COG: NMA1414 COG3678 # Protein_GI_number: 15794326 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; N Cell motility; T Signal transduction mechanisms; P Inorganic ion transport and metabolism # Function: P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein # Organism: Neisseria meningitidis Z2491 # 13 143 16 144 144 137 50.0 5e-33 MFAVLKPYFVPHFLSVFLLVYSSLIYAAPVSSMQLDDFHPNCDVRQLGLTQSQQNSLRKI RSEYRQAADKAYRKTVRSDRTRRQTIIKILSGNMFDQNAARDYVENRYLPNMDFAVDELA IQYRFYQLLNDRQRQQWLATCLR >gi|289656362|gb|ADEA01000005.1| GENE 170 173025 - 173891 667 288 aa, chain - ## HITS:1 COG:NMA1415 KEGG:ns NR:ns ## COG: NMA1415 COG2607 # Protein_GI_number: 15794327 # Func_class: R General function prediction only # Function: Predicted ATPase (AAA+ superfamily) # Organism: Neisseria meningitidis Z2491 # 1 287 1 287 287 483 80.0 1e-136 MKISKLLKKINSVIDRLDVLLPPEQNRIDWSALAYRWQSIGKQGILESLPNPHTFPLNRL AAVNSQTERLKRNTEQFLAGRPANNVLMSGARGTGKSSLVKALLHEYSEQGLRLIEVDKS DLISLPALLTLLEKRKEKFIVFCDDLSFESGDETYKALKTALDGGLSQRCNNVLVYATSN RRHLMPEYMDENVGTTGIRGEIHQKEAVEEKVSLSDRFGLWLSFYPFDQNDYLLAVENWL NDFEVPFDETAKKAALMWAQMRGNRSGRSAWQFACDWAGRLPEQRILD >gi|289656362|gb|ADEA01000005.1| GENE 171 173893 - 174534 606 213 aa, chain - ## HITS:1 COG:NMA1416 KEGG:ns NR:ns ## COG: NMA1416 COG0307 # Protein_GI_number: 15794328 # Func_class: H Coenzyme transport and metabolism # Function: Riboflavin synthase alpha chain # Organism: Neisseria meningitidis Z2491 # 1 202 16 217 220 306 71.0 2e-83 MFTGIVQGMGQIVRIQEPSADFRTHIVDLPPEIADDLQIGASVANNGCCLTITEIDGSRV SFDLMGETLSKTNLGRLKEGDMVNLERAAKFGDEIGGHLMSGHIITTTRITRIKENDFNR TVWFTLPDLLKPYILTKGFVGLDGCSLTIGDVTETEFNVHLIPETLKRTLFGGCRVGDTV NVEIDPQTQAVVDTVKRFMKQQRQMIDIGCLGD >gi|289656362|gb|ADEA01000005.1| GENE 172 174702 - 174971 376 89 aa, chain - ## HITS:1 COG:NMA1397 KEGG:ns NR:ns ## COG: NMA1397 COG0776 # Protein_GI_number: 15794310 # Func_class: L Replication, recombination and repair # Function: Bacterial nucleoid DNA-binding protein # Organism: Neisseria meningitidis Z2491 # 1 89 1 89 89 122 94.0 2e-28 MNKSELIEAIAQEAGISKAAAAKALDATTNAVTNALKNGDTVTLVGFGTFYVGERAERQG RNPKTGAPLTIAAAKTPKFRAGKALKDAL >gi|289656362|gb|ADEA01000005.1| GENE 173 175162 - 177615 2867 817 aa, chain - ## HITS:1 COG:NMB1231 KEGG:ns NR:ns ## COG: NMB1231 COG0466 # Protein_GI_number: 15677103 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATP-dependent Lon protease, bacterial type # Organism: Neisseria meningitidis MC58 # 1 817 1 820 820 1364 87.0 0 MATTDKHFEEYSALATLPLRDVVVYPHMVLPLFVGRPKSIAALEAAMGNDEPVFLLAQLN PDTEEPEPKDLHAMGTVAQVLQVLKLPDGTVKVLVEGIRRARALTVEDTGQLFLAHIEAV NEFVDEHHPDMEALRRTLLSQFEQYAKLNKKIPAEVVSTINSISENSRLVDTIAAHLQLK LEQRQEILETPGISDRMEFLLGQLESELDIMQVEKRIRGRVKRQMEKSQREYYLNEQVKA IQRELGEEDERGELDALEAKIKEAGMTKEAEEKCLSELKKLKMMPPMSAESTVVRNYIDT LLELPWKKKSRVSKDIAKADLVLNADHYGLEKVKERILEYLAVQKRMDKLKGPILCLVGP PGVGKTSLGESIAKATGRQYVRMALGGVRDESEIRGHRRTYIGSMPGKILQNMAKAGVKN PLFLLDEIDKMGNDFRGDPASALLEVLDPEQNNKFADHYAEVDYDLSDVMFIATSNSLNI PTPLLDRMEIIRLSGYTEDEKINIAMQYLVPKQMKRNGVKEGELAVEKSAVRDIIRYYTR EAGVRSLDREIAKICRKVVMQITLAEDKKKTSKTGTASKAKPKVIKVNEKNLHDYLGVRR FDYGVAESENRIGQVTGLAWTEVGGELLTIEAVALPGKGTIQCTGQLGDVMKESVSAAWS VVRSRAESVGLPPDFYEKKDIHVHVPEGATPKDGPSAGIAMTLAMVSAFTKIPVRADVAM TGEITLRGEVLPIGGLKEKLLAALRGGIKHVLIPHDNVKDLEEIPDNVKTGLTIHPVKWI DEVLALGLQYQPEPWKEPVAADLSKPKPKSRTKATQH >gi|289656362|gb|ADEA01000005.1| GENE 174 177855 - 178124 436 89 aa, chain + ## HITS:1 COG:NMA1380 KEGG:ns NR:ns ## COG: NMA1380 COG2921 # Protein_GI_number: 15794301 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 4 89 6 91 91 125 73.0 1e-29 MPTDRSVLIEFPCTFQIKVMGAQHPEFETAILETVRIHAPETQSHHISTRPSSKGNYLGA SVNVYVTSQAQLDDIYRALTSHEMVKVVL >gi|289656362|gb|ADEA01000005.1| GENE 175 178128 - 178772 663 214 aa, chain + ## HITS:1 COG:NMB1217 KEGG:ns NR:ns ## COG: NMB1217 COG0321 # Protein_GI_number: 15677090 # Func_class: H Coenzyme transport and metabolism # Function: Lipoate-protein ligase B # Organism: Neisseria meningitidis MC58 # 18 203 1 186 190 337 86.0 1e-92 MKVIQKGLVEYLPTFEAMKAFNAARTAETEDELWVVEHPPVFTQGLAGKPEHLLIRDDIP VVQIDRGGQITYHGPGQLVVYTMIDFKRRKTSVRRIVSALENSIISTLSEYGIKAAADPG RPGVYVDGRKIASLGLRIKNGSVYHGLALNVNMDLSPFTHINPCGYAGMEMVQIADFVRP CPSLAEVAGKLTGHLQRELNSQAMAGDEKNGKAV >gi|289656362|gb|ADEA01000005.1| GENE 176 178886 - 179884 1311 332 aa, chain + ## HITS:1 COG:NMA1378 KEGG:ns NR:ns ## COG: NMA1378 COG0320 # Protein_GI_number: 15794299 # Func_class: H Coenzyme transport and metabolism # Function: Lipoate synthase # Organism: Neisseria meningitidis Z2491 # 12 332 8 327 327 645 97.0 0 MTTDTTSANKSDPKRGVKLKGADKTARIPIKVVPLQEKLKKPEWIRAKLPSRKFFEIKDI LREQKMHTVCEEASCPNIGECFSKGTATFMIMGDICTRRCPFCDVGHGRPNMLDPDEPKN LAESVKAMNLRYVVITSVDRDDLRDGGAQHFADCIKAIRETSPNTKIEILVPDFRGRLDI ALKILAETPPDVMNHNLETHPSLYKKARPGANYQHSLDLLRRYKEMMPHIPTKSGIMVGL GETDEDVREIMRDMRAHNIEMITIGQYLQPSDGHLPVLRYVTPDQFKIFEKEAYELGFTN AAIGAMVRSSYHADEQAAEALRESHGGGCGHH >gi|289656362|gb|ADEA01000005.1| GENE 177 180010 - 181224 1661 404 aa, chain - ## HITS:1 COG:HI1533 KEGG:ns NR:ns ## COG: HI1533 COG0304 # Protein_GI_number: 16273433 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: 3-oxoacyl-(acyl-carrier-protein) synthase # Organism: Haemophilus influenzae # 1 404 1 405 406 510 66.0 1e-144 MKRVVVTGIGILSSLGNNCREVLESLKNLKSGISFDESYREMGLRSHLAGNIKIDTKEHI DRKILRFMGDAAAYAYIAMKEAIAHAGLTEEQVSNIRTGIVTGSGGASSSSQVEAADTLR ASGVKRIGPYGVTKCMASTVSACLATPFKIKGVNYSISSACSTSAHCIGHAAELIQLGKQ DIVFAGGGEEISWQMGSLFDAMGALSSKYNDTPEQASRAFDADRDGFVISGGGSILVMEE YEHAKARGANILCELTGYGATSDGYDMVQPSGEGAVRCMQMALAQHGGKVDYINAHGTST PVGDTKELGAVREVFAGQEIPFISSTKSLSGHAQGAAGSNEAIYSILMMQNDFACASANI QNLDEQAEGLPILRENREMKLNAVMSNSFGFGGTNATLIFSRVD >gi|289656362|gb|ADEA01000005.1| GENE 178 181289 - 181816 768 175 aa, chain - ## HITS:1 COG:PA1610 KEGG:ns NR:ns ## COG: PA1610 COG0764 # Protein_GI_number: 15596807 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases # Organism: Pseudomonas aeruginosa # 8 175 4 171 171 281 76.0 3e-76 MTTQFVPQNSYTKEELLSCGRGELFGAGNAQLPLPNMLMIDRIVNINSTGGKYGKGEIIA ELDINPDLWFFGCHFEGDPVMPGCLGLDAMWQLVGFYLGWTGAPGRGRALGCAEVKFSGQ VLPKHKKITYHIHIKRVMNSKLVLGIADAEMSVDGRKIYEGNGLRVGLFTTTDDF >gi|289656362|gb|ADEA01000005.1| GENE 179 182061 - 182876 640 271 aa, chain - ## HITS:1 COG:NMB1521 KEGG:ns NR:ns ## COG: NMB1521 COG1562 # Protein_GI_number: 15677374 # Func_class: I Lipid transport and metabolism # Function: Phytoene/squalene synthetase # Organism: Neisseria meningitidis MC58 # 1 270 6 275 275 402 70.0 1e-112 MSVEHYENFPVGSILLPRRLRKPIHAVYAFARTADDIADEGETADAERLRGLDDLQKELD RIYTGEIPQTALMKRLQNEAIKPFAMPPEPFYDLLSAFRQDVVKKRYQNFGELVDYCRRS ANPVGRMMLHLYGENDPVSIAHSDGICTALQLINFWQDVALDWQKGRVYIPQEDLAKYKV SEEQIAEGRADFAFQRLMAHECERTFQILKAGSPLGKRLRGRIGFELRMIIVGGQIILQK LDGCKYDMFGRRPILDKKDWLIILKRAFLKK >gi|289656362|gb|ADEA01000005.1| GENE 180 183150 - 184961 1567 603 aa, chain + ## HITS:1 COG:NMA1719 KEGG:ns NR:ns ## COG: NMA1719 COG4232 # Protein_GI_number: 15794612 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol:disulfide interchange protein # Organism: Neisseria meningitidis Z2491 # 1 601 13 612 613 866 71.0 0 MKKILYFLTVLFAFCSNAFAVDASKLLPPEQAFVPQVHVTASGVSVQFKIADGYYMYQSK IMAATEPSNVLGAPQFGKGEQKEDEFFGKQTVYHRAAQVDWPYKKTQPKYKLTLSYQGCA EVGVCYPPVDTVFDIDGNGFYSPQTDMPISGKDRFLSNPAQPVSSDGLPSPSGDNRQDGS RFKLSRDTLGANLLAFFLAGLGLSFTACMYPLLPIVSSIVIGDKNSGGRTRAFELSMVYV QGLALTYMLVGVIAGLTGSLLSVWLQQPWVVLPASALMVILALSMFGLFNIQLPASVQAY FQSQSNKLSGGHIVSVFIMGMLSALIVGPCVAPPLAFALGYIGQTGDALLGGLALYVMAL GTGVPLIIVGTFGSILPRAGDWMNGVKYAFGFILLAVAVYLATPYLPYAVVTALYTLLLI VPAGMLLAKANKLGDRLKSFSMLFGSLLLIGGVWFGYQSANGNSTALHHFLTLNPPSASG HSTKHGKTFTDTAELKAAMTAALQANPDKPVLLDFYADWCISCREMEAYTFNQPQVHEAV DMERFFQIDVTANTPDHQTLMKEYGLFGPPGIFVIHADGRRSEPLQGFAKPKEFIAWYKE NEK >gi|289656362|gb|ADEA01000005.1| GENE 181 185254 - 186135 1244 293 aa, chain - ## HITS:1 COG:NMB0612 KEGG:ns NR:ns ## COG: NMB0612 COG1177 # Protein_GI_number: 15676516 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component II # Organism: Neisseria meningitidis MC58 # 1 291 1 291 295 485 95.0 1e-137 MQKNKLSWFLKLMLALALAFLYIPLFVLVIYSFNESKLVTVWGGFSTKWYGVLLQNSTIL EAAWLSLRIALVSSLAAVVLGTLAGYAMARIKRFRGSTLFAGMISAPMVMPDVITGLSML LLIIQVQMFLQNSEWLQALYFDRGFFTIFLGHTTLCMAYITVVIRSRLIELDQSLEEAAM DLGARPLKIFFVITLPLIAPAIASGFLLGITLSLDDLVITSFLSGPGSSTLPQVIFSKIK LGLDPQMNVLATILIGIIGTLVIVINYWMMRQATKREREAAEAYRQEKLAAGS >gi|289656362|gb|ADEA01000005.1| GENE 182 186135 - 187112 1149 325 aa, chain - ## HITS:1 COG:NMB0611 KEGG:ns NR:ns ## COG: NMB0611 COG1176 # Protein_GI_number: 15676515 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component I # Organism: Neisseria meningitidis MC58 # 1 325 1 321 321 527 90.0 1e-149 MNLKTLKRKLLRRPGQRAVIAVPYVWLLVLFLVPFAIVLKISFAEQEIAIPPFTPLTTID EDLGRLNIAVSYQNYADIFQNFWNTLGQLFNPFSKSSGDNIYLLTYWSSIKTALTTTAIC LLIGYPTAYAISRARPSIRNGLLLAIMLPFWTSFLLRVYAWMGLLGHNGIINNFLLKYGI ISEPLDLFYNAFSLNLVMVYAYLPFMILPLYTQLVKLDGRLLEAASDLGARPIKSFFTIT LPLSKTGIIAGSMLVFVPAVGEFVIPELVGGSENLMIGKVLWQAFFDQNNWPLASAVAVV MVALLVVPIALFQHYENRELEEGTK >gi|289656362|gb|ADEA01000005.1| GENE 183 187132 - 188256 1280 374 aa, chain - ## HITS:1 COG:NMB0610 KEGG:ns NR:ns ## COG: NMB0610 COG3842 # Protein_GI_number: 15676514 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport systems, ATPase components # Organism: Neisseria meningitidis MC58 # 1 374 46 419 419 736 93.0 0 MTATIASSAKPYLQIQGLVKKFGDNYAVDHIDLDIEKHEIFALLGSSGSGKSTLLRMLAG MEIPNQGKIILDGQDITKLAPYDRPINMMFQSYALFPHMTVEQNIAFGLKQDKMPKDEIA ARVEEMLRLVQMTKYAKRKPHQLSGGQQQRIALARSLAKRPKILLLDEPLGALDKKLRQQ TQLELVNTLEQVGVTCIMVTHDQEEAMTMATRIAIMSEGQLQQVGTPSDVYDFPNSRFTA EFIGETNIFDGVVVEDHADYAVIACDGLENHVRIDHGLGGPAEQNLWVSIRPEDIDLYKE KPSHLGDFNWAQGTVKDIAYLGSFAIYHVKLGNGRVIKSQVPAPYWYVRNITPPTWDETV YISWPENQPTPLLR >gi|289656362|gb|ADEA01000005.1| GENE 184 188611 - 189288 649 225 aa, chain + ## HITS:1 COG:NMB1038 KEGG:ns NR:ns ## COG: NMB1038 COG2003 # Protein_GI_number: 15676925 # Func_class: L Replication, recombination and repair # Function: DNA repair proteins # Organism: Neisseria meningitidis MC58 # 1 224 1 224 225 355 81.0 3e-98 MSIKHWPEGERPREKLLERGAGALSDAELLAILLRVGTRGMSAVDLARYLLNGFGSLGKL MNADIKSLSSYKGMGTASFTQFAVIREIGRRILSEELRENIIFSNPQTVADYLRLNLGHE RVEVSYALLLNRQNQLIAMRELSRGTVAENTVYIREIVKLALDEYADSLIIAHNHPGGSA RPSEADIGFTKRLAQALDLVDVSLLDHFIVTAKEVCSLRETGYMD >gi|289656362|gb|ADEA01000005.1| GENE 185 189369 - 190730 1581 453 aa, chain - ## HITS:1 COG:NMA1053 KEGG:ns NR:ns ## COG: NMA1053 COG0617 # Protein_GI_number: 15794003 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA nucleotidyltransferase/poly(A) polymerase # Organism: Neisseria meningitidis Z2491 # 1 417 1 418 453 598 69.0 1e-171 MLKKWLHKVLPGKRGKTAVHKEIIPFAAHRISEDMLSFAAEKVVRRLHNEGFEAYVVGGA VRDLLLGIEPKDFDVATNATPEEVRKIFRRSRIIGRRFQIVHVMVGPETIEVTTFRGGGK VVQNQHGRIMKDNNYGSMEEDAMRRDFTCNALYYDPIRRLIVDFHHGAADVQAKKLVMIG NPAERYQEDPVRILRAVRLSGKLGFEVEEHTAAPIPEYAGRLKQEPVSRLFDEILKLLFS GHARDCLQQLNKLGIGSDIHPLLTAMKSADKPENRIISLALKNTDERLRADKSVSTGFVL AAVLWPQLNRYWQRNISQGQRPSPALTDAINKFRDDIEKGWGVPQRFAATMREIWQFQPQ FDNTRGARPHRLLAQQRFRAAYDFLVLRAQVGEADEGLVQWWTAFQHADNDERAKLTASG WQGQESGQGGGQSKRKRRRKPRRKKAEGSGGEG >gi|289656362|gb|ADEA01000005.1| GENE 186 190989 - 191174 444 61 aa, chain + ## HITS:1 COG:no KEGG:NMO_1274 NR:ns ## KEGG: NMO_1274 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 1 58 1 58 61 75 79.0 4e-13 MYHYKSDATQFLDKLMADHPELEQQRLANRKLLWDVELNPEEQAGFEAAKVAKKPYTYEA E >gi|289656362|gb|ADEA01000005.1| GENE 187 191196 - 191864 1159 222 aa, chain + ## HITS:1 COG:NMB1441 KEGG:ns NR:ns ## COG: NMB1441 COG4122 # Protein_GI_number: 15677299 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Neisseria meningitidis MC58 # 1 222 1 222 222 335 73.0 5e-92 MTVDTQNTPLGLKSYLNRIGEPEHPVLQALRGRTQNHRLGKMALAREQAALLTWLARLIQ AERYLEVGVFTGYSSTAMALALPEHARITACDISVTFTDIARETWRQAGVEHKIELHLQP ALLTLDGLIAQGLENTYDMALIDADKPPTPQYYERCLQLVRSGGIIAIDNVLLGGRVMEE AGRDRPPSIAVLQDFNRRLPLDGRIVPITLPVGDGLTLLLKK >gi|289656362|gb|ADEA01000005.1| GENE 188 191880 - 192557 981 225 aa, chain + ## HITS:1 COG:NMB1440 KEGG:ns NR:ns ## COG: NMB1440 COG1729 # Protein_GI_number: 15677298 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 29 212 37 224 237 189 50.0 5e-48 MNIKTNIALLFPVFVLSACAAVSNGDESSSRKGVPYPVLNEQTQIDQLGIQVARLERSVN LLQTRIRQLERQGRGAGQRISDSKLKNNYLAKNDAAQTVADTDANETRLYDQAFKYYRSG NYTAAAAVLKGADGGNGSEISRKNMYLLLQSQQRLGNCESVINIGGRYANRFRNTAQAPD AMYSIGQCQYKLQQKDIARDTWRKLIHTYPDSEAAKRAAVSIKQR >gi|289656362|gb|ADEA01000005.1| GENE 189 192633 - 193118 833 161 aa, chain + ## HITS:1 COG:NMB1439 KEGG:ns NR:ns ## COG: NMB1439 COG0041 # Protein_GI_number: 15677297 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase # Organism: Neisseria meningitidis MC58 # 1 158 1 158 161 220 91.0 8e-58 MIQVGIIMGSDSDWPVMRQAANFLEEFGVGYEARVVSAHRTPDLMFEYAETARSRGIKAI IAGAGGAAHLPGMVAAKTTVPVLGVPVPSKYLRGEDSLLSIVQMPKGVPVATFAIGEAGA ANAALFAVSMLANEDAELARKLAEFRSRQEQSVLAMELPAE >gi|289656362|gb|ADEA01000005.1| GENE 190 193234 - 194292 1587 352 aa, chain + ## HITS:1 COG:NMA1661 KEGG:ns NR:ns ## COG: NMA1661 COG0389 # Protein_GI_number: 15794555 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Neisseria meningitidis Z2491 # 1 351 1 351 352 616 87.0 1e-176 MRQRKIIHIDMDAFYASVELREQPHLKGKPVVVAWEGSRSVICAASYEARQFGLHSAMSV ATAKRLCPQAVYVPPHFDLYRSISAQIHGIFRRYTTLIEPLSLDEAYLDVTDNLQQIPYA SDVAEKIRAEILAETGLTASAGIAPNKFLAKIASDWRKPNGQFVLPPQKAAAFLETLPLG KIPGVGKVTLKKMQSLGMRTAGDLRRFERGELLNLFGRYGYRLYDLARGVDERPVKPDRE RLQISTEITLPEDLSLAQAAGHLPHLAEDLWRQIQRKNVEAKSVTLKLKTHDFRIITRSL TYSSVLPDSAALLRAAQTLAGRIPPQREDAFRLIGLGVAHLVPKDQQQSLWL >gi|289656362|gb|ADEA01000005.1| GENE 191 194444 - 195175 977 243 aa, chain + ## HITS:1 COG:NMA1366 KEGG:ns NR:ns ## COG: NMA1366 COG0175 # Protein_GI_number: 15794287 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes # Organism: Neisseria meningitidis Z2491 # 1 243 1 244 244 265 56.0 6e-71 MSLFRPKFWKIPEITEAERQRLPALAAELEQRLQTVAARFPQAAFASSLAVEDMVITDAI CRLKLPLRIITLNTGKLNPETEALIAATEARYQTRLEVFAPDKEAAAAFEREFGVTAMYD SVELRRRCCHIRKIEPLNRALKNAPAWLTGQRRSQSDTRSELNFEELDRSRNISKFNPIF DWEENDVWAYAEAYGVPLNELYHQGYPSIGCEPCTRPVKEGENIRAGRWWWESKDSKECG LHK >gi|289656362|gb|ADEA01000005.1| GENE 192 195380 - 196042 867 220 aa, chain - ## HITS:1 COG:NMA1368 KEGG:ns NR:ns ## COG: NMA1368 COG3658 # Protein_GI_number: 15794289 # Func_class: C Energy production and conversion # Function: Cytochrome b # Organism: Neisseria meningitidis Z2491 # 1 197 1 196 218 248 63.0 5e-66 MKQKIKVWDLPTRLFHWTLVLAFAFMWYSADKGGTMLVWHLRCGLLVLALLVFRVCWGFW GSDTARFGSFVRGPSHIKRYLQGKIGENEQPGHNPLGALMVLALLAAVSVQVATGLFAAD ADTFSYSGYLNGRVSEETGNALRKIHLRFFNLLALLAAVHVVSILFYKFLKKHDLIKPMI TGYKELEGRLPVLRFAGFGKLAAAAAAALLAVACVLAAAG >gi|289656362|gb|ADEA01000005.1| GENE 193 196145 - 197032 390 295 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90022317|ref|YP_528144.1| ribosomal protein S15 [Saccharophagus degradans 2-40] # 28 289 242 500 500 154 39 2e-36 MFTSRYRLSDSESLFQTASMYPDVFKPRPAESHKGTYGTLAVIGGAEGMSGAVVLAATAA AYAGCGKVWAGFNQRQLPFAVIDGRPEIMLATAQNLLLRNDADARAVGCGLGLGEAASGI VAAALSEADGKPLLLDADALTLLSRSSELQRLAVRHGNLILTPHPAEAERLLKTDTAEIQ KARIQSVETLSRRFNAVTVLKGHRSLIAAPDRGTTANPSGNAGLATAGSGDVLSGIIGSL LAQGIDAFQAAAAGVWLHGAAADILRDSETGEIGMLAGEIAPAARWLRNYLVRGK >gi|289656362|gb|ADEA01000005.1| GENE 194 197100 - 197462 333 120 aa, chain - ## HITS:1 COG:NMA1264 KEGG:ns NR:ns ## COG: NMA1264 COG0239 # Protein_GI_number: 15794197 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Integral membrane protein possibly involved in chromosome condensation # Organism: Neisseria meningitidis Z2491 # 1 120 1 119 119 90 52.0 6e-19 MLYDMTAVALGAVFGALLRWLFGLMLADTVSWFALGTLAANWFGGFLIGVAAELVGNPHW RLLLITGFLGSLTTFSGFSLEIVGMLQAQRWAAAAATASLHLFGSLLFTVLGIYLAQCFK >gi|289656362|gb|ADEA01000005.1| GENE 195 197499 - 197996 536 165 aa, chain - ## HITS:1 COG:NMA1265 KEGG:ns NR:ns ## COG: NMA1265 COG3235 # Protein_GI_number: 15794198 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis Z2491 # 2 165 62 225 226 166 64.0 1e-41 NGQLAGMSYHLLGMNLAALMVGAPAALWLGALLLFPSLLISDAGWQAYPFNALALLLPPL AVNLSFRALVDRLPANIFVFIFLNGFIGSAAAMLLTGAVLTGVLDRTGAFSDGVMWGSAF PVFFLLSWAEAFISGAATAIFVALKPHWINTFDDGRYLKSTNKIW Prediction of potential genes in microbial genomes Time: Thu May 26 13:10:12 2011 Seq name: gi|289656361|gb|ADEA01000006.1| Neisseria sp. oral taxon 014 str. F0314 cont1.6, whole genome shotgun sequence Length of sequence - 1365 bp Number of predicted genes - 2, with homology - 0 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 789 - 848 10.2 1 1 Op 1 . + CDS 881 - 1006 125 ## 2 1 Op 2 . + CDS 1063 - 1206 134 ## + Term 1220 - 1282 4.7 Predicted protein(s) >gi|289656361|gb|ADEA01000006.1| GENE 1 881 - 1006 125 41 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKELNQFELENVAGGNDLAYDIGHAIGDGARGAWNWVASWF >gi|289656361|gb|ADEA01000006.1| GENE 2 1063 - 1206 134 47 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKVINQFDLEKVSGGGVLATIGAIAGVIAVADAAWSAGKGIVAGWND Prediction of potential genes in microbial genomes Time: Thu May 26 13:11:21 2011 Seq name: gi|289656360|gb|ADEA01000007.1| Neisseria sp. oral taxon 014 str. F0314 cont1.7, whole genome shotgun sequence Length of sequence - 199829 bp Number of predicted genes - 186, with homology - 174 Number of transcription units - 113, operones - 46 average op.length - 2.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 375 - 434 6.5 2 2 Tu 1 . + CDS 657 - 779 186 ## + Term 783 - 849 11.0 + Prom 1331 - 1390 5.3 3 3 Op 1 . + CDS 1606 - 4689 3988 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins + Term 4692 - 4728 0.7 4 3 Op 2 . + CDS 4772 - 5179 488 ## COG3187 Heat shock protein + Term 5223 - 5280 14.4 5 4 Tu 1 . + CDS 5331 - 6038 736 ## COG2378 Predicted transcriptional regulator + Prom 6133 - 6192 4.1 6 5 Tu 1 . + CDS 6358 - 7011 1110 ## COG0625 Glutathione S-transferase + Term 7052 - 7099 7.2 - Term 7046 - 7080 4.0 7 6 Tu 1 1/0.161 - CDS 7116 - 8177 1249 ## COG0407 Uroporphyrinogen-III decarboxylase - Term 8185 - 8239 8.6 8 7 Op 1 11/0.032 - CDS 8260 - 9480 1591 ## COG3071 Uncharacterized enzyme of heme biosynthesis 9 7 Op 2 . - CDS 9477 - 11840 1755 ## COG2959 Uncharacterized enzyme of heme biosynthesis 10 8 Tu 1 . - CDS 11952 - 13439 1412 ## Lebu_2011 hypothetical protein - Prom 13472 - 13531 4.5 + Prom 13431 - 13490 6.4 11 9 Op 1 . + CDS 13652 - 14452 838 ## COG1526 Uncharacterized protein required for formate dehydrogenase activity 12 9 Op 2 . + CDS 14481 - 15428 1033 ## COG3058 Uncharacterized protein involved in formate dehydrogenase formation + Term 15494 - 15533 0.7 - Term 15660 - 15709 11.0 13 10 Op 1 . - CDS 15736 - 16512 1244 ## COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 14 10 Op 2 . - CDS 16609 - 18372 237 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P - Prom 18394 - 18453 5.5 - Term 18455 - 18502 9.0 15 11 Op 1 . - CDS 18523 - 19326 862 ## NGK_1218 hypothetical protein - Term 19344 - 19390 3.0 16 11 Op 2 . - CDS 19419 - 20831 1675 ## COG0498 Threonine synthase - Prom 20937 - 20996 4.5 + Prom 20937 - 20996 2.6 17 12 Tu 1 . + CDS 21024 - 22331 1658 ## COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase + Prom 22881 - 22940 4.5 18 13 Tu 1 . + CDS 22982 - 25228 2922 ## COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid + Term 25470 - 25531 -0.7 19 14 Op 1 . + CDS 25656 - 25931 370 ## gi|255065682|ref|ZP_05317537.1| putative membrane transporter 20 14 Op 2 . + CDS 25924 - 27429 1437 ## COG3182 Uncharacterized iron-regulated membrane protein 21 14 Op 3 . + CDS 27432 - 27728 251 ## gi|298368875|ref|ZP_06980193.1| chitin-binding lectin 1 (PL-I) + Term 27758 - 27797 10.0 - Term 27743 - 27788 15.3 22 15 Tu 1 . - CDS 27816 - 29912 3444 ## COG1629 Outer membrane receptor proteins, mostly Fe transport - Prom 29963 - 30022 8.2 23 16 Tu 1 . + CDS 30227 - 32014 2422 ## COG0369 Sulfite reductase, alpha subunit (flavoprotein) + Term 32250 - 32285 0.4 + Prom 32118 - 32177 7.5 24 17 Tu 1 . + CDS 32400 - 32924 776 ## NMCC_1282 hypothetical protein 25 18 Tu 1 . + CDS 33035 - 33604 853 ## NMCC_1281 membrane lipoprotein + Prom 33684 - 33743 2.9 26 19 Tu 1 . + CDS 33776 - 34738 708 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 27 20 Tu 1 . + CDS 34848 - 36689 2656 ## COG0322 Nuclease subunit of the excinuclease complex - Term 36957 - 36994 -0.4 28 21 Op 1 3/0.032 - CDS 37056 - 37628 383 ## COG3198 Uncharacterized protein conserved in bacteria 29 21 Op 2 . - CDS 37634 - 39085 1300 ## COG0348 Polyferredoxin - Prom 39138 - 39197 7.6 + Prom 39303 - 39362 4.4 30 22 Tu 1 . + CDS 39539 - 41518 2971 ## COG0021 Transketolase + Term 41547 - 41586 10.4 + Prom 41614 - 41673 8.2 31 23 Tu 1 . + CDS 41717 - 43726 1923 ## COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily + Term 43737 - 43783 14.5 - Term 43729 - 43767 10.2 32 24 Op 1 4/0.032 - CDS 43789 - 44793 1683 ## COG0451 Nucleoside-diphosphate-sugar epimerases 33 24 Op 2 2/0.097 - CDS 44883 - 45845 1489 ## COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase 34 24 Op 3 2/0.097 - CDS 45900 - 46640 1072 ## COG0284 Orotidine-5'-phosphate decarboxylase - Term 46699 - 46743 1.7 35 25 Op 1 . - CDS 46778 - 47425 1227 ## COG0563 Adenylate kinase and related kinases - Prom 47447 - 47506 3.7 36 25 Op 2 . - CDS 47508 - 48026 794 ## NMC0625 hypothetical protein 37 25 Op 3 11/0.032 - CDS 48037 - 48798 1042 ## COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase 38 25 Op 4 2/0.097 - CDS 48795 - 48977 418 ## COG2835 Uncharacterized conserved protein 39 25 Op 5 2/0.097 - CDS 49041 - 49622 433 ## COG3184 Uncharacterized protein conserved in bacteria - Prom 49652 - 49711 3.8 40 26 Op 1 . - CDS 49733 - 50749 956 ## COG1663 Tetraacyldisaccharide-1-P 4'-kinase 41 26 Op 2 . - CDS 50776 - 51951 634 ## NMO_0158 hypothetical protein - Prom 51981 - 52040 3.2 + Prom 51951 - 52010 5.7 42 27 Tu 1 . + CDS 52101 - 53456 1702 ## COG1570 Exonuclease VII, large subunit - Term 53523 - 53566 4.8 43 28 Tu 1 . - CDS 53599 - 54096 560 ## COG1881 Phospholipid-binding protein - Prom 54126 - 54185 5.7 + Prom 54154 - 54213 6.2 44 29 Op 1 . + CDS 54335 - 57097 4368 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit + Term 57105 - 57159 -0.0 + Prom 57139 - 57198 4.9 45 29 Op 2 . + CDS 57232 - 58608 1658 ## COG0773 UDP-N-acetylmuramate-alanine ligase + Term 58623 - 58682 21.1 + Prom 58782 - 58841 6.4 46 30 Tu 1 . + CDS 58970 - 59209 151 ## COG3547 Transposase and inactivated derivatives + Term 59283 - 59325 6.3 - Term 59271 - 59313 10.5 47 31 Tu 1 . - CDS 59345 - 60415 2026 ## COG0473 Isocitrate/isopropylmalate dehydrogenase 48 32 Op 1 . + CDS 60404 - 60685 134 ## gi|298368901|ref|ZP_06980219.1| hypothetical protein HMPREF9016_00569 49 32 Op 2 . + CDS 60751 - 60924 302 ## + Term 60970 - 61007 7.1 - Term 60962 - 60991 2.8 50 33 Tu 1 . - CDS 61015 - 61479 587 ## COG2731 Beta-galactosidase, beta subunit - Prom 61508 - 61567 2.0 51 34 Tu 1 . - CDS 61604 - 62569 984 ## Coch_0727 hypothetical protein - Prom 62638 - 62697 3.8 - Term 62707 - 62752 10.1 52 35 Op 1 . - CDS 62758 - 63399 878 ## COG0066 3-isopropylmalate dehydratase small subunit 53 35 Op 2 . - CDS 63479 - 63700 380 ## NMC1178 putative lipoprotein 54 36 Tu 1 . - CDS 63801 - 65207 2213 ## COG0065 3-isopropylmalate dehydratase large subunit - Prom 65351 - 65410 5.8 + Prom 65317 - 65376 6.4 55 37 Tu 1 . + CDS 65475 - 66830 2068 ## NMA1449 putative glutamate--cysteine ligase (EC:6.3.2.2) + Prom 67400 - 67459 6.0 56 38 Op 1 5/0.032 + CDS 67503 - 68282 794 ## COG0247 Fe-S oxidoreductase 57 38 Op 2 13/0.000 + CDS 68279 - 68980 847 ## COG1556 Uncharacterized conserved protein 58 38 Op 3 . + CDS 68977 - 70422 1483 ## COG1139 Uncharacterized conserved protein containing a ferredoxin-like domain + Term 70441 - 70494 17.1 - Term 70491 - 70536 12.4 59 39 Tu 1 . - CDS 70550 - 70768 444 ## COG2841 Uncharacterized protein conserved in bacteria - Prom 70822 - 70881 5.3 + Prom 70822 - 70881 3.4 60 40 Op 1 . + CDS 70964 - 71713 844 ## COG0778 Nitroreductase 61 40 Op 2 . + CDS 71769 - 72056 414 ## gi|298368915|ref|ZP_06980233.1| conserved hypothetical protein + Prom 72124 - 72183 4.5 62 41 Tu 1 . + CDS 72235 - 73485 2304 ## COG0112 Glycine/serine hydroxymethyltransferase + Prom 73915 - 73974 4.1 63 42 Tu 1 . + CDS 74000 - 75547 1900 ## COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) 64 43 Op 1 . + CDS 75783 - 76451 1035 ## COG4912 Predicted DNA alkylation repair enzyme 65 43 Op 2 . + CDS 76488 - 77036 221 ## COG4815 Uncharacterized protein conserved in bacteria + Prom 77143 - 77202 4.7 66 43 Op 3 . + CDS 77225 - 78166 923 ## COG1275 Tellurite resistance protein and related permeases + Term 78243 - 78288 14.4 - Term 78223 - 78282 13.2 67 44 Tu 1 . - CDS 78312 - 78779 612 ## RPA1910 hypothetical protein - Prom 78844 - 78903 6.5 + Prom 78846 - 78905 6.3 68 45 Tu 1 . + CDS 78930 - 79379 552 ## COG1846 Transcriptional regulators + Prom 79432 - 79491 4.8 69 46 Op 1 . + CDS 79515 - 79961 711 ## COG0790 FOG: TPR repeat, SEL1 subfamily 70 46 Op 2 . + CDS 79992 - 80972 1365 ## COG4099 Predicted peptidase + Term 80990 - 81040 1.2 + Prom 81040 - 81099 2.4 71 47 Op 1 . + CDS 81128 - 81265 120 ## 72 47 Op 2 . + CDS 81285 - 81983 859 ## COG0726 Predicted xylanase/chitin deacetylase 73 48 Op 1 . + CDS 82101 - 82238 205 ## NT05HA_1066 NmrA family protein 74 48 Op 2 . + CDS 82270 - 82947 651 ## COG0702 Predicted nucleoside-diphosphate-sugar epimerases 75 48 Op 3 . + CDS 82937 - 83788 239 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 + Prom 83880 - 83939 2.7 76 48 Op 4 . + CDS 83992 - 85311 1577 ## COG0477 Permeases of the major facilitator superfamily + Term 85339 - 85397 14.8 - Term 85325 - 85385 19.2 77 49 Op 1 . - CDS 85406 - 86074 614 ## COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins 78 49 Op 2 . - CDS 86143 - 86760 505 ## gi|298368929|ref|ZP_06980247.1| phosphoribosylformylglycinamidine synthase 2 - Prom 86849 - 86908 6.7 + TRNA 87225 - 87296 23.9 # Sup TTA 0 0 + TRNA 87306 - 87378 54.6 # Lys TTT 0 0 + TRNA 87381 - 87456 68.2 # Met CAT 0 0 79 50 Tu 1 . + CDS 87925 - 89910 2459 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs + Term 89941 - 90002 16.4 - Term 90367 - 90434 22.6 80 51 Tu 1 . - CDS 90451 - 90567 178 ## - Prom 90678 - 90737 7.0 81 52 Tu 1 . - CDS 91663 - 91737 86 ## - Prom 91870 - 91929 4.8 - Term 92078 - 92112 2.5 82 53 Tu 1 . - CDS 92129 - 92284 150 ## - Prom 92403 - 92462 5.9 - Term 92851 - 92882 2.9 83 54 Tu 1 . - CDS 92974 - 93270 297 ## gi|298368932|ref|ZP_06980250.1| hypothetical protein HMPREF9016_00600 - Prom 93433 - 93492 3.4 - Term 93459 - 93491 1.5 84 55 Tu 1 . - CDS 93559 - 93954 259 ## COG3544 Uncharacterized protein conserved in bacteria - Prom 93982 - 94041 6.4 - Term 94077 - 94110 0.5 85 56 Tu 1 . - CDS 94194 - 96221 3342 ## COG0556 Helicase subunit of the DNA excision repair complex - Prom 96249 - 96308 5.3 + Prom 96269 - 96328 4.0 86 57 Op 1 . + CDS 96384 - 96722 481 ## NMCC_0844 hypothetical protein 87 57 Op 2 . + CDS 96722 - 97048 421 ## gi|298368936|ref|ZP_06980254.1| conserved hypothetical protein + Term 97077 - 97122 10.1 + Prom 97106 - 97165 4.3 88 58 Tu 1 . + CDS 97194 - 98600 2106 ## COG0305 Replicative DNA helicase + Prom 98637 - 98696 7.0 89 59 Op 1 5/0.032 + CDS 98750 - 99418 793 ## COG4970 Tfp pilus assembly protein FimT 90 59 Op 2 5/0.032 + CDS 99443 - 100111 638 ## COG4967 Tfp pilus assembly protein PilV 91 59 Op 3 5/0.032 + CDS 100114 - 100995 223 ## COG4966 Tfp pilus assembly protein PilW 92 59 Op 4 2/0.097 + CDS 100974 - 101534 563 ## COG4726 Tfp pilus assembly protein PilX 93 59 Op 5 . + CDS 101544 - 102017 363 ## COG4969 Tfp pilus assembly protein, major pilin PilA + Term 102050 - 102101 17.6 - Term 102035 - 102088 18.0 94 60 Op 1 . - CDS 102123 - 103559 1159 ## COG0790 FOG: TPR repeat, SEL1 subfamily - Prom 103586 - 103645 2.5 - Term 103653 - 103705 6.1 95 60 Op 2 . - CDS 103726 - 106188 1135 ## PROTEIN SUPPORTED gi|15894003|ref|NP_347352.1| fused ribonuclease/ribosomal protein S1 - Prom 106298 - 106357 80.3 + TRNA 106269 - 106355 71.7 # Leu CAG 0 0 + TRNA 106392 - 106478 70.5 # Leu CAG 0 0 + TRNA 106585 - 106675 68.8 # Ser GGA 0 0 96 61 Tu 1 . + CDS 106930 - 107403 762 ## COG2846 Regulator of cell morphogenesis and NO signaling - Term 107396 - 107446 14.4 97 62 Tu 1 . - CDS 107447 - 108415 1152 ## COG0042 tRNA-dihydrouridine synthase - Prom 108444 - 108503 5.0 + Prom 108427 - 108486 4.1 98 63 Tu 1 . + CDS 108508 - 109461 1030 ## COG1957 Inosine-uridine nucleoside N-ribohydrolase + Term 109484 - 109524 2.9 + Prom 109467 - 109526 3.1 99 64 Op 1 1/0.161 + CDS 109561 - 111114 2261 ## COG0463 Glycosyltransferases involved in cell wall biogenesis + Term 111126 - 111158 -1.0 100 64 Op 2 . + CDS 111185 - 112510 1706 ## COG1253 Hemolysins and related proteins containing CBS domains + Term 112534 - 112585 16.1 - Term 112526 - 112569 13.3 101 65 Op 1 . - CDS 112589 - 114082 2056 ## COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes - Prom 114105 - 114164 2.7 102 65 Op 2 . - CDS 114187 - 114522 665 ## NMB2152 hypothetical protein + Prom 114551 - 114610 2.9 103 66 Tu 1 . + CDS 114642 - 115823 1697 ## COG4992 Ornithine/acetylornithine aminotransferase + Prom 115863 - 115922 5.4 104 67 Op 1 . + CDS 115944 - 117956 2909 ## COG0210 Superfamily I DNA and RNA helicases + Prom 118025 - 118084 3.0 105 67 Op 2 . + CDS 118112 - 119677 2537 ## COG5339 Uncharacterized protein conserved in bacteria + Term 119697 - 119738 9.6 - Term 119686 - 119725 7.6 106 68 Op 1 . - CDS 119767 - 119907 77 ## gi|298368955|ref|ZP_06980273.1| conserved hypothetical protein - Prom 119936 - 119995 6.7 107 68 Op 2 2/0.097 - CDS 119997 - 120839 970 ## COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase - Term 120869 - 120926 12.4 108 69 Tu 1 . - CDS 120929 - 121312 570 ## COG0853 Aspartate 1-decarboxylase - Prom 121393 - 121452 3.3 - Term 121418 - 121459 0.1 109 70 Op 1 . - CDS 121470 - 121796 508 ## COG1324 Uncharacterized protein involved in tolerance to divalent cations 110 70 Op 2 . - CDS 121807 - 122088 507 ## gi|298368959|ref|ZP_06980277.1| TonB protein 111 71 Op 1 3/0.032 - CDS 122219 - 122887 1190 ## COG0560 Phosphoserine phosphatase 112 71 Op 2 . - CDS 122884 - 123552 752 ## COG0593 ATPase involved in DNA replication initiation - Prom 123697 - 123756 6.4 113 72 Op 1 2/0.097 + CDS 123995 - 124282 384 ## COG1396 Predicted transcriptional regulators 114 72 Op 2 . + CDS 124301 - 126868 1366 ## COG2844 UTP:GlnB (protein PII) uridylyltransferase + Term 126905 - 126953 16.5 - Term 126890 - 126943 16.2 115 73 Op 1 13/0.000 - CDS 126959 - 128188 1243 ## COG0845 Membrane-fusion protein 116 73 Op 2 . - CDS 128261 - 130468 202 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 117 73 Op 3 . - CDS 130505 - 131710 1034 ## c0360 hypothetical protein - Prom 131812 - 131871 3.0 - Term 131815 - 131852 1.0 118 74 Tu 1 . - CDS 131947 - 132024 85 ## - Prom 132066 - 132125 6.3 + Prom 131757 - 131816 6.4 119 75 Tu 1 . + CDS 131980 - 132117 62 ## + Term 132121 - 132164 14.0 - Term 132102 - 132159 22.0 120 76 Tu 1 . - CDS 132169 - 132954 1172 ## COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family - Prom 133097 - 133156 4.3 + Prom 132927 - 132986 3.4 121 77 Op 1 2/0.097 + CDS 133141 - 133956 1145 ## COG0565 rRNA methylase 122 77 Op 2 . + CDS 134020 - 134868 860 ## COG3782 Uncharacterized protein conserved in bacteria 123 77 Op 3 . + CDS 134905 - 136161 1863 ## COG0144 tRNA and rRNA cytosine-C5-methylases + Prom 136182 - 136241 5.4 124 78 Tu 1 . + CDS 136286 - 136597 573 ## COG0278 Glutaredoxin-related protein + Term 136613 - 136664 8.9 + Prom 136642 - 136701 6.4 125 79 Op 1 2/0.097 + CDS 136728 - 137354 1220 ## COG0035 Uracil phosphoribosyltransferase + Term 137370 - 137409 6.1 126 79 Op 2 . + CDS 137433 - 137756 666 ## COG4390 Uncharacterized protein conserved in bacteria + Term 137773 - 137814 11.3 + Prom 137791 - 137850 7.2 127 80 Tu 1 . + CDS 137877 - 138683 1081 ## COG5266 ABC-type Co2+ transport system, periplasmic component + Term 138880 - 138916 1.5 - Term 138684 - 138737 19.0 128 81 Tu 1 . - CDS 138768 - 139328 600 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases - Prom 139492 - 139551 80.3 + TRNA 139459 - 139551 67.0 # Ser GCT 0 0 129 82 Op 1 . + CDS 139791 - 142016 3601 ## COG2838 Monomeric isocitrate dehydrogenase 130 82 Op 2 . + CDS 142098 - 142541 788 ## COG0698 Ribose 5-phosphate isomerase RpiB + Term 142627 - 142658 0.1 + Prom 142562 - 142621 2.1 131 83 Op 1 . + CDS 142674 - 144053 1866 ## COG0534 Na+-driven multidrug efflux pump 132 83 Op 2 . + CDS 144119 - 144892 623 ## COG3680 Uncharacterized protein conserved in bacteria 133 83 Op 3 2/0.097 + CDS 144939 - 145979 1031 ## COG0812 UDP-N-acetylmuramate dehydrogenase 134 83 Op 4 2/0.097 + CDS 146014 - 146691 931 ## COG1309 Transcriptional regulator 135 83 Op 5 2/0.097 + CDS 146790 - 147566 970 ## COG0451 Nucleoside-diphosphate-sugar epimerases 136 83 Op 6 2/0.097 + CDS 147618 - 148187 819 ## COG3165 Uncharacterized protein conserved in bacteria 137 83 Op 7 . + CDS 148260 - 149150 1158 ## COG0061 Predicted sugar kinase + Term 149211 - 149263 14.8 + Prom 149381 - 149440 7.7 138 84 Op 1 . + CDS 149520 - 151082 1630 ## COG1292 Choline-glycine betaine transporter 139 84 Op 2 . + CDS 151086 - 151214 214 ## 140 84 Op 3 . + CDS 151265 - 152935 2054 ## KRH_22440 acyltransferase (EC:2.3.1.-) + Term 152945 - 152987 3.1 - Term 153049 - 153115 20.6 141 85 Tu 1 . - CDS 153143 - 153790 241 ## PROTEIN SUPPORTED gi|153833204|ref|ZP_01985871.1| ribosomal protein S15 - Prom 153940 - 153999 6.6 + Prom 153915 - 153974 5.5 142 86 Tu 1 . + CDS 154110 - 154376 384 ## MS1159 hypothetical protein + Prom 154400 - 154459 1.9 143 87 Op 1 . + CDS 154550 - 156412 2826 ## COG0370 Fe2+ transport system protein B 144 87 Op 2 . + CDS 156412 - 156540 117 ## + Term 156567 - 156622 21.0 - Term 156555 - 156607 20.1 145 88 Tu 1 . - CDS 156771 - 157904 1429 ## COG1929 Glycerate kinase + Prom 157846 - 157905 3.2 146 89 Tu 1 . + CDS 157988 - 158101 112 ## + Term 158143 - 158187 15.5 + Prom 158146 - 158205 6.8 147 90 Tu 1 . + CDS 158335 - 159996 2691 ## COG0497 ATPase involved in DNA repair + Term 160011 - 160050 10.0 - Term 159998 - 160040 11.1 148 91 Tu 1 . - CDS 160072 - 160251 172 ## gi|298368992|ref|ZP_06980310.1| hypothetical protein HMPREF9016_00661 - Prom 160281 - 160340 4.3 149 92 Tu 1 . + CDS 160425 - 161381 310 ## PROTEIN SUPPORTED gi|212636859|ref|YP_002313384.1| Glutathione synthase; Ribosomal protein S6 modification enzyme + Term 161392 - 161419 -0.9 - Term 161316 - 161358 1.6 150 93 Tu 1 . - CDS 161510 - 162043 570 ## COG1335 Amidases related to nicotinamidase 151 94 Tu 1 2/0.097 - CDS 162176 - 164215 2563 ## COG1200 RecG-like helicase - Prom 164236 - 164295 4.9 - Term 164243 - 164285 11.9 152 95 Op 1 9/0.032 - CDS 164304 - 164738 870 ## COG1952 Preprotein translocase subunit SecB 153 95 Op 2 . - CDS 164760 - 165017 381 ## COG0695 Glutaredoxin and related proteins - Prom 165057 - 165116 4.5 + Prom 165117 - 165176 1.8 154 96 Op 1 . + CDS 165264 - 166757 2289 ## COG1530 Ribonucleases G and E 155 96 Op 2 2/0.097 + CDS 166802 - 167194 688 ## COG0818 Diacylglycerol kinase + Prom 167206 - 167265 9.9 156 97 Tu 1 . + CDS 167338 - 167817 873 ## COG2847 Uncharacterized protein conserved in bacteria + Term 167860 - 167914 16.1 + Prom 167863 - 167922 2.6 157 98 Tu 1 . + CDS 167963 - 169066 1729 ## COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 158 99 Tu 1 . + CDS 169183 - 170856 2727 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II + Prom 170909 - 170968 5.3 159 100 Tu 1 . + CDS 170989 - 172623 2478 ## COG0504 CTP synthase (UTP-ammonia lyase) + Term 172655 - 172684 2.1 - Term 172637 - 172679 7.1 160 101 Tu 1 . - CDS 172759 - 173502 615 ## COG3338 Carbonic anhydrase - Prom 173654 - 173713 4.7 161 102 Tu 1 . + CDS 173826 - 175580 2676 ## COG0155 Sulfite reductase, beta subunit (hemoprotein) + Term 175688 - 175716 -1.0 - Term 175774 - 175821 0.8 162 103 Op 1 . - CDS 175861 - 176487 759 ## COG1386 Predicted transcriptional regulator containing the HTH domain 163 103 Op 2 . - CDS 176487 - 177965 641 ## gi|298369007|ref|ZP_06980325.1| tetratricopeptide repeat containing protein 164 103 Op 3 2/0.097 - CDS 177979 - 178923 1443 ## COG1161 Predicted GTPases 165 103 Op 4 3/0.032 - CDS 179006 - 179860 1040 ## COG1660 Predicted P-loop-containing kinase 166 103 Op 5 3/0.032 - CDS 179841 - 180803 947 ## COG1493 Serine kinase of the HPr protein, regulates carbohydrate metabolism 167 103 Op 6 2/0.097 - CDS 180806 - 181255 668 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) - Prom 181284 - 181343 5.8 168 104 Tu 1 . - CDS 181418 - 182323 723 ## COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases - Prom 182343 - 182402 6.3 - TRNA 182490 - 182574 77.5 # Leu TAG 0 0 169 105 Op 1 . + CDS 182744 - 183415 657 ## NMO_1067 hypothetical protein 170 105 Op 2 . + CDS 183412 - 184011 842 ## COG0807 GTP cyclohydrolase II + Term 184161 - 184227 30.0 + TRNA 184139 - 184214 95.7 # Val TAC 0 0 + TRNA 184250 - 184326 93.9 # Asp GTC 0 0 + Prom 184252 - 184311 80.2 171 106 Op 1 . + CDS 184461 - 185564 1170 ## NMB1269 hypothetical protein 172 106 Op 2 . + CDS 185561 - 186037 470 ## COG0394 Protein-tyrosine-phosphatase 173 106 Op 3 . + CDS 186046 - 186408 262 ## gi|298369017|ref|ZP_06980335.1| hypothetical protein HMPREF9016_00686 + Term 186414 - 186464 5.1 174 106 Op 4 . + CDS 186485 - 187459 1162 ## COG0158 Fructose-1,6-bisphosphatase + Term 187480 - 187533 11.1 - Term 187475 - 187514 10.0 175 107 Op 1 34/0.000 - CDS 187547 - 188314 672 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 176 107 Op 2 31/0.000 - CDS 188324 - 189040 950 ## COG0765 ABC-type amino acid transport system, permease component 177 107 Op 3 . - CDS 189030 - 189854 1183 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Prom 189879 - 189938 5.5 - Term 189934 - 189982 9.6 178 108 Tu 1 . - CDS 190005 - 190586 439 ## Nhal_3070 LemA family protein - Prom 190669 - 190728 6.8 - Term 190705 - 190765 9.1 179 109 Op 1 19/0.000 - CDS 190792 - 191628 1146 ## COG0414 Panthothenate synthetase 180 109 Op 2 . - CDS 191659 - 192450 984 ## COG0413 Ketopantoate hydroxymethyltransferase - Prom 192493 - 192552 5.5 - TRNA 192587 - 192662 90.9 # Thr TGT 0 0 - TRNA 192692 - 192767 90.9 # Thr TGT 0 0 + Prom 192833 - 192892 4.0 181 110 Op 1 . + CDS 192983 - 193774 1209 ## COG0421 Spermidine synthase + Term 193816 - 193868 10.1 182 110 Op 2 . + CDS 193891 - 194529 895 ## COG2945 Predicted hydrolase of the alpha/beta superfamily + Term 194560 - 194609 13.8 - Term 194542 - 194603 16.0 183 111 Op 1 . - CDS 194616 - 196406 2632 ## CAP2UW1_2831 hypothetical protein - Prom 196456 - 196515 4.2 - Term 196442 - 196468 -1.0 184 111 Op 2 . - CDS 196556 - 197284 602 ## COG0710 3-dehydroquinate dehydratase - Prom 197331 - 197390 1.8 185 112 Tu 1 . + CDS 197398 - 198090 1070 ## COG1814 Uncharacterized membrane protein + Prom 198168 - 198227 4.7 186 113 Tu 1 . + CDS 198290 - 199829 1565 ## COG1197 Transcription-repair coupling factor (superfamily II helicase) Predicted protein(s) >gi|289656360|gb|ADEA01000007.1| GENE 1 3 - 116 84 37 aa, chain + ## HITS:0 COG:no KEGG:no NR:no KVSGGGVLATIGAIAGVIAVADAAWSAGKGIVAGWND >gi|289656360|gb|ADEA01000007.1| GENE 2 657 - 779 186 40 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKELKIRELEAISGGYDIRDYLPGGSYWTDYWRKHLFPFL >gi|289656360|gb|ADEA01000007.1| GENE 3 1606 - 4689 3988 1027 aa, chain + ## HITS:1 COG:NMA1266 KEGG:ns NR:ns ## COG: NMA1266 COG1674 # Protein_GI_number: 15794199 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Neisseria meningitidis Z2491 # 166 1019 152 1008 1014 846 59.0 0 MFWTILILVLLCAIGGLLWLHYSQQRSWQDELAMLEGTHTEQDEEEDLPETVISAGWRQE TAQEAEETGTVETPAQEPCQDGEESGNEDEESEDEEDIFSKTAATLSSLINQFGGHAVVD AETETQEPSEQAVFREPAVESAIEEHQEHHTAAPTLPPRKSTIPDPYIEPFVDSEPPEYA PAKLVNSDLEVITLEEATRSLHEAAEEAVQKAAFFDPQPAVPSHRPSENLKTIDLDDPAV RRTRERVLASVSEISRQIPAAQSLRHEYTQAAMRAVELESLAPFQKPEHPDEIRADDIRA NLSRHSAARRFSAAQILADDYRPQTIRNEEILANLSHSSSPLGRRAANPIRRIDTSRRES VLPETARVEQSAAKVQPKKPLFPPKTARPNPASATAPAATAPAASVKPQPEAHKPPVFAA QPVNPTLNHAPINAHISNKPSWSIADRLISEASNVIIAEPPAIIPIPAPTQSVIPTEAER LAVEATPQQFQTTSEPVSVPLHRTAHTPQAVARPSETVIRPVSRHQAETPPASASAHLPT VDLLLPPQFDPSATQTEETLLENSITIEEKLAEFKVKVKVMDAYAGPVITRYEIEPDVGV RGNAVLNLEKDLARSLGVASIRVVETIPGKTCMGLELPNPKRQMIRLSEIFNSPAFTESK SKLTLALGQDITGEPVVTDLAKAPHLLVAGTTGSGKSVGVNAMILSMLFKAPPEDVRMIM IDPKMLELSIYEGIPHLLAPVVTDMKLAANALNWCVNEMEKRYRLMSHLGVRNLAGFNQA VAEAAAHGRKIANPFSFTPDDPEPLEKLPFIVVVVDEFADLMMTAGKKIEELIARLAQKA RAAGIHLILATQRPSVDVITGLIKANIPTRIAFQVSSKVDSRTILDQMGAENLLGQGDML FLPPGTGYPQRVHGAFASDGEVHRVVEYLKQFGEPDYIDEILSGGMTDDLPGLNRSGDGE IDPMYDEAVAYIVKSRKASISGIQRALRIGYNRAARLIDQMEADGIVSAPETNGNRTVLA QNSEHSH >gi|289656360|gb|ADEA01000007.1| GENE 4 4772 - 5179 488 135 aa, chain + ## HITS:1 COG:AGc4472_2 KEGG:ns NR:ns ## COG: AGc4472_2 COG3187 # Protein_GI_number: 15889734 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Heat shock protein # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 19 131 16 130 130 62 36.0 2e-10 MKKTALLPASLLFCLFAAPAVGAPLDGRWNITEVARRPVTAAEAYLEFNGAEHRFSAGAG CNTLTGSFHAAKGRLKIDDAASTLMACDEEIMKQEETVSRAFSNSKSYRIKGDTLLLTDR RGRVLLKAERAQNQD >gi|289656360|gb|ADEA01000007.1| GENE 5 5331 - 6038 736 235 aa, chain + ## HITS:1 COG:mll3208 KEGG:ns NR:ns ## COG: mll3208 COG2378 # Protein_GI_number: 13472799 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Mesorhizobium loti # 1 227 1 224 229 179 49.0 4e-45 MPRSRRLLTLLDLLRRRHGPVTAETLAQQLSVSTRTVYRDIAQLCAQGADIRGEAGLGFV LHTDLGLPPLMFDKPEIEALVFGMRWVAANGDDGLAADAKSVLAKIDAVLPGHLREHLNT QALYPRPCQTRPFTPQESETLSAIRTALRGNRILSFDYTDAQGRPTRRSVRPLAVGYFPD ACLLAAWCEKRRDFRHFRTDRMSNLNIGDTFPVPRMVLLREWQRQEDLDLSVFEI >gi|289656360|gb|ADEA01000007.1| GENE 6 6358 - 7011 1110 217 aa, chain + ## HITS:1 COG:AGc3433 KEGG:ns NR:ns ## COG: AGc3433 COG0625 # Protein_GI_number: 15889171 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 214 1 205 208 118 35.0 7e-27 MHRFTLYTHPYSRGTNVVWMLKECGAQYDVKLIPFGEAMKSADYLAVNPMGKVPALKADG TVLTETAAIITFLAEQFPDKHLIPAADSLARGEFYRWLCFSIHLEYAGFDKINRVPDSSE RRKAIGYGDFDTAFATLRDHLAKHDFIVGDRFSALDVYFTALLNHFIRVMPMRGAPSVFT ADEPVFSAYIDRHTARPAFAETMAWARQAAAELEKQA >gi|289656360|gb|ADEA01000007.1| GENE 7 7116 - 8177 1249 353 aa, chain - ## HITS:1 COG:NMB0781 KEGG:ns NR:ns ## COG: NMB0781 COG0407 # Protein_GI_number: 15676679 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III decarboxylase # Organism: Neisseria meningitidis MC58 # 1 352 1 352 354 672 90.0 0 MIPLKNDTFLRALLKQPVEYTPVWMMRQAGRYLPEYKATRAKAGSFLDLCKNTELATEVT VQPLERFELDAAILFSDILTVPDAMGLGLYFAEGEGPKFTRPLQHERDIAALQVPDMDRL QYVFDAVASIRKALNGRVPLIGFSGSPFTLACYMVEGGGSKEFRTVKTMMYSRPDLLHKI LDVNAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFQEFSLRYMRQIVGGLKRENEGR RVPVIIFAKGGGLWLEQMADIGADALGLDWTCNIGEARRRVGDKVALQGNFDPFALFGTP ESIKTEVARILAGFGNGSGHVFNLGHGISQHTNPEHAGILVDSVHELSRQYHH >gi|289656360|gb|ADEA01000007.1| GENE 8 8260 - 9480 1591 406 aa, chain - ## HITS:1 COG:NMB0779 KEGG:ns NR:ns ## COG: NMB0779 COG3071 # Protein_GI_number: 15676677 # Func_class: H Coenzyme transport and metabolism # Function: Uncharacterized enzyme of heme biosynthesis # Organism: Neisseria meningitidis MC58 # 1 404 1 404 407 519 71.0 1e-147 MRSVVWIVILFAVAVGLALASGVYTGNVYVVAGQTMLRMNLHAFVLGLIIAVVILYFLVR LIAGLLNIPGRMQRFGTARKGRQAATALNNAGQAFFEGKFEQAENEAAKVLANKEAGGNR ALALMLGAHAADQMDNIELRDRYLKDIEALPKKQQLSRYLLLAESALTNRDYPAAKQNLD AAAQINPNLTRLVRLQLRYAFDDGNAAEVLEKSEKLEKAGAISDYEAEQYQSWAYRRLLA SAADADGLKSCLKRIPENLKSGGLCVEIAEKYERLGLYGQAVKWVDRYYPQTQQIELLEP FVDSVRYLSDREQQQAIDTADSWLQTRPDNAKLLMYLGQLAYGKRLWGKAQGYLEASIAI KPTVSARLALAKVFDETEQLQKAEAQRKLVLESVSDEEEPLALENK >gi|289656360|gb|ADEA01000007.1| GENE 9 9477 - 11840 1755 787 aa, chain - ## HITS:1 COG:NMB0778 KEGG:ns NR:ns ## COG: NMB0778 COG2959 # Protein_GI_number: 15676676 # Func_class: H Coenzyme transport and metabolism # Function: Uncharacterized enzyme of heme biosynthesis # Organism: Neisseria meningitidis MC58 # 324 721 20 420 424 451 63.0 1e-126 MPRILIIRPKFRAKADMQTCTDAGWLAVPFSPIEIEVDEGALRRLPERFKQADAVFWVSP TAIETAAPHLDFSDGLKKQITVGQASRKILAAFCHHEIYSPSSGNDSEAVLRLPLWKEMP KGSSVLIVRGHGGRDLLASELRRKGFKVSFAEIYFRRPNSLNWHDFNPHSIKAAYVASGE LAQALFRQVPSQFSLFFKSLLYFTHHPRIADTLRLAGAENVRVIQQFDAAVLNEAANEPD TADIVASRNPPPEKNGEQSNKVAAERPDSDKENTAASDKRDTVPTTETFAATSENNAEPS EKQAAGEITGNTMSEPKQIPQTSANPVVIRQSSGKGLAAGALVLALLGLGASGFLFVEGQ NVLKNQQLEFSQKLDKAALGESENAALLKENINRQTVIQSELERLGSGQKANAEQIVLTQ KAYQELAKGRANWLADEAETLLNQASQQLVLSGNVQGAISVLEHVHNRLSRFDQPELLAI KQAVSSDLASLKNHPYVDISGTALRIDRLETAVAGLPLLIDGTLKPSKNENSRSPNPNLS WWENAWEKSLDALKGLVEVRRLDNNDAMLIAPDQVYFVRENLRLRLLDARTALMQHNSEV YQSDLNNAEAAVRQYFDSNSPATRSWLKELADLKSLDIRPVAEDALQSSRAAVYAYQEGI RGQAPEMPLIAAPSIITPAPAQSAAPVVTPAVPALPSENRAASAAGQQAVPEANGPASAA QPKPQIPKAPAAIKRPQVPVVPAKPAPATPKAPAADQPPMRDFINRNPPAQTDPTPSADT SSRGDQA >gi|289656360|gb|ADEA01000007.1| GENE 10 11952 - 13439 1412 495 aa, chain - ## HITS:1 COG:no KEGG:Lebu_2011 NR:ns ## KEGG: Lebu_2011 # Name: not_defined # Def: hypothetical protein # Organism: L.buccalis # Pathway: not_defined # 9 494 52 535 537 528 55.0 1e-148 MGAFSRTLLAGSLAAGLVACSTVKDGAAAGYDLDFSKQKYTEQSLEVNGRSVKFRAYEGI VYVRNPVDTKYEIINIYVPEAYYSGGSVGGFTAETAPIFFPNQIGGYMPAEPGKPGFGRG GEASQTPNAALTALSKGYVVASPGARGRTAANGKAPAAIVDLKAAVRYLKFNDKAMPGDA GKIISNGTSAGGALSALLGATGNSRDYEAHLKALGAAEGGDDIFAVSAYCPITDLDHADM AYEWQFNGVNDYQKMNISMLDYNVKRELVPGTLTKEEISLSNQLKPLYPAYINSLKLKDA GGRALTLDKNGNGSFKDYVAGYLAKSAQSQLDAGKKLGNRNWLTVKNGKVTAVDFSKYAK AAGRQKIPPAFDGVDLSTGENQLFGNAQTDKRHFTEFSMRHSTAENAAMADTETVKIMNP LNYIGTSGVKIPQNWRIRVGTADRDTSLAVSAVLAAKLQNNGYAVDYFLPWDVPHSGDYD LEELFVWMKQVSTQK >gi|289656360|gb|ADEA01000007.1| GENE 11 13652 - 14452 838 266 aa, chain + ## HITS:1 COG:ECs4821 KEGG:ns NR:ns ## COG: ECs4821 COG1526 # Protein_GI_number: 15834075 # Func_class: C Energy production and conversion # Function: Uncharacterized protein required for formate dehydrogenase activity # Organism: Escherichia coli O157:H7 # 24 261 35 273 277 243 50.0 3e-64 MSSQPYTAATVCRVSSNGMIQDTDSLAEESAVALVYNGISHAVLMATPQNLEELALGFSL SEGILQNRSELYGTDIRSSCDGIEVRLDIASSRFQALKERRRSLNGRTGCGLCGIDSLSA VKPVLPQIIRSRRFTVGEIQTALSALNRYQPLRQTVGSLHGAAWADEHGIVAAFEDVGRH NALDKLIGHGTLNAFDWQQGFAIISSRASYEMVAKAAVSRIGCIVAVSAPTALAVRLAEQ AGMTLIGFAGPEKFTIYTHAEFIEAV >gi|289656360|gb|ADEA01000007.1| GENE 12 14481 - 15428 1033 315 aa, chain + ## HITS:1 COG:HI0009 KEGG:ns NR:ns ## COG: HI0009 COG3058 # Protein_GI_number: 16271984 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Uncharacterized protein involved in formate dehydrogenase formation # Organism: Haemophilus influenzae # 23 306 25 297 302 141 32.0 2e-33 MNTRSARPDGKIQKGLFHTPFWLAPEKDIFASRAVRFKELEQEDGSGWSSYLSLLSVICE AQQAAFNRHTFPLPPLYRGQTVLPAAAQGEVPDGFLTVFTDLLNATDGQTNAAVAAETAK LKALTAAEAAALVRRILTQQTEPSDRAAEIWVQAALQVVWTAWAAQLSEDDVPTAENSDR IFCPCCGTEAVGSVILIRSDLTGFRYMHCPLCNSRWNALRAKCPTCGDAGGMRLQQVEEK SAPHLAPAYSAAHAESCESCHTYRKLYRQDKQQYADPVADDLATLGLDIAVGEAGYERGG ANPFLLIDDGSCVQI >gi|289656360|gb|ADEA01000007.1| GENE 13 15736 - 16512 1244 258 aa, chain - ## HITS:1 COG:NMA1442 KEGG:ns NR:ns ## COG: NMA1442 COG1018 # Protein_GI_number: 15794347 # Func_class: C Energy production and conversion # Function: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 # Organism: Neisseria meningitidis Z2491 # 1 258 1 258 258 513 95.0 1e-145 MAAFNTEKVLSVHHWTDAYFTFTCTRDESLRFENGQFVMVGLMVDGKPLMRAYSVASANW EEHLEFFSIKVQDGPLTSRLQHLKVGDEVLISKKPTGTLVAGDLNPGKHLYLLSTGTGIA PFLSVTKDPEIYEQFEKIILVHGVRYKKDLAYYDRFTKELPEHEYLGDLVKDKLIYYPIV SREEYEHHGRLTDLMVSGKLFEDIGLPKINPQDDRAMLCGSPAMLKDTRQVLNDFGLVES PKVGVRGDFLIERAFVDQ >gi|289656360|gb|ADEA01000007.1| GENE 14 16609 - 18372 237 587 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 335 567 124 353 398 95 32 1e-18 MATTRTISNRQLYIRLLGYLKDYWKIFAASVVSMLVVAATMPAFGYLLKPLINEGFVDKN MQKMAWLPLAVVGLFLVRGVFNFFNDYCTTYLSGSLVDRIRREMFAKMMRLPSSYYSGNA GGRLVSRVLNDAGQITEAGFNVITVIAKDGVSVVGLLGLLMYLNWQLTLITFAVLPVVAV SVRTVSKRLRRLSQSNQQYLGQMTQVLNESIDGARVIKVYGGQPYETDRFGRISTDVRRN LVKQVAASSVGTSFTQLMASVALAVIIYTAARQAGSSDFSAGDFMSFLSSMIMMFDPVKR MTGVMQSLQRGLAAADSVFTFLDEPEEDDGGKAVLDAGTGDIEFSGVYYRYPEAEHNSLN SIDLTVPQGKVVALVGASGCGKTTLANMLPRFFDPTGGAVRIGGENIRNYTLESLRGRIA LVSQDVVLFSGTIAQNIAYGRSGDASEDEIIRAAQAANAWNFIQAMPQGLQTEIGENGLK LSGGQRQRIAIARALLRNAPILILDEATSALDNESERLVQAALENLMQNRTTIVIAHRLS TIEKADNIVVMHEGCIVEQGTHDELLAKGGRYADLHSLQSGGSQEPA >gi|289656360|gb|ADEA01000007.1| GENE 15 18523 - 19326 862 267 aa, chain - ## HITS:1 COG:no KEGG:NGK_1218 NR:ns ## KEGG: NGK_1218 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 13 265 10 262 264 301 62.0 2e-80 MNTTNQALGVPDFSGCLAAFAAKQKANIACYELSDGLVVWIRKAGARNPAWRYALLGMIT KPLRLGVLKPVPNLGGEKAISVEEKRLRELKAAGISVPEVLAHQADALMLSHLDGKQLDT QIEQEARGKHLTAWNAGLNAIGEVHRKGQFLSQAFARNIMISGKDVSFLDFEDDPSEVLT LAECQSRDWLCYLHSTSLMLKKYGLLERAAALWHDKLLTQPDEIQYLVTQTAKPIRWMHS LSHSRWGRDMLRLAAVAGLFYLADLYF >gi|289656360|gb|ADEA01000007.1| GENE 16 19419 - 20831 1675 470 aa, chain - ## HITS:1 COG:NMA1440 KEGG:ns NR:ns ## COG: NMA1440 COG0498 # Protein_GI_number: 15794345 # Func_class: E Amino acid transport and metabolism # Function: Threonine synthase # Organism: Neisseria meningitidis Z2491 # 1 469 1 469 469 802 82.0 0 MNYISTRGKTAPKPFSEVLLMGLAPDGGLMLPESYPQISRGTLDEWRNLSYPELAFEIMS LFVTDIPADDLRGIVGRTYTEAVFNSKEITPVRTLSDGLKIQALSNGPTLAFKDMAMQFL GNAFEYVLDKEGRHLNILGATSGDTGSAAEYALRGKKGINVFMLSPEGKMSAFQRAQMYS LQDANIHNIAVKGMFDDCQDIVKAVQNDAGFKATYHIGTVNSINWGRIVAQVVYYFAGYF KATQSNGEKVSFCVPSGNFGNICAGHIAKQMGLPIGRLIAATNENDVLDEFFKTGRYLPR SAAQTHVTSSPSMDISKASNFERFVFDLVERDTDKVNALWAEVASGKGFDLSDLLGTVRG KYGFVSGKSLHSDRLATIKQVYEQDGQLIDPHTADGVKVARELRETGETVVCLETALAVK FEATIHEAVGDVAVPRPAGLGGLESLPQRVEVVANDAELVKNIIEKAVSV >gi|289656360|gb|ADEA01000007.1| GENE 17 21024 - 22331 1658 435 aa, chain + ## HITS:1 COG:NMB1258 KEGG:ns NR:ns ## COG: NMB1258 COG2256 # Protein_GI_number: 15677127 # Func_class: L Replication, recombination and repair # Function: ATPase related to the helicase subunit of the Holliday junction resolvase # Organism: Neisseria meningitidis MC58 # 1 431 1 431 436 797 96.0 0 MSDLFTRQPDAPLAERLRPHTLDDVIGQQHLIGEGKPLRVAVEGGKPHSMLLWGPPGVGK TTLARILAQSFNAQFLPVSAVFSGVKDIREAIDKAEIALQQGRTTILFVDEVHRFNKAQQ DAFLPHVESGLLTFIGATTENPSFEVNPALLSRAQVYVLQFLSSDDLKKLIAKVLALPEY RDFTIEADAQELLVNTADGDARRLLNLLEQLLRAADTRRLKTLTAEFLADSLGAQIRRFD KGGESFYNQISALHKSVRGSHPNAALYWFCRMLDGGTDPRYLARRIVRMAWEDIGLADPR AFQIANDAAATFERLGSPEGELALAQAVLYLAAAAKSNAGYKAYNQMRRFVKENASDEVP VHLRNAPTKLMKELGYGREYRYAHDEPNAYAAGESYMPDGLDEPDFYQPVPRGLEIKIGE KLAWLKSLDEEASER >gi|289656360|gb|ADEA01000007.1| GENE 18 22982 - 25228 2922 748 aa, chain + ## HITS:1 COG:NMA0575 KEGG:ns NR:ns ## COG: NMA0575 COG4773 # Protein_GI_number: 15793566 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid # Organism: Neisseria meningitidis Z2491 # 1 748 1 724 725 466 39.0 1e-131 MKFYHLSAPLLLILPVCTQAADAYVPADAEPAAVTLSTVTVRGKRQKSLNKGYTASGTYA ATGMPLTLREVPQSVSVVTDKQMKDQGKRSVYDALSWVNGISGNPASSRYAVTNMYARGE TVNDYQIDGMTTEIDGNQLLNSGAYERVEVVRGTSALQGGVGDPSATVNLVRKRPTKERQ AEISVGIGRWRRWNAEADVSGPLNSSGSLRGRAVINAEGGRHWTEGSRDRSDMVYGIAEY DFSPQTTAYAGINHQRAREKEFYGGDLPVYDSAGYPTRLGIRDNNKIKGSSYRERATELF TGLEHRFENNWKAKLEYRYNREKTLNPGMGDAPYSYLRHDDSSARANFYKMADNIVSHAF SFKLNGQYDLWGRKHEAVFGIGGYRTRNKRVWANPEGNYSIDDIYDFIRRRDYPSIASVN DWKWEGDTIATRQISGYAATRLHATDKLSLLLGANYARYHYQSIPVDGSPNTEAKEGLSA GTASPPQVDGSPNTEAKEGRFAPYAGITYDLTDNLSAYASYSRLFMPHENGETDINRRPI DPITGRTVEAGLKGEWLEGRLNASLSVFQSKRRNVPVEAGKFDNDDTYYRSANTKAHGWE AEISGSPAEGWDITAGVQSHLTREENGNRPNSQYDPRHSFKLFTTYRLTKTRWTLGGGVR WQSKTFVDKYGDLSNIEFDDDEAKERARVLSRQKSFAVVDLTAQYDISKNANLTLNFDNV FDKRYRMDTMYHDYGQPRSLSGTLRYKF >gi|289656360|gb|ADEA01000007.1| GENE 19 25656 - 25931 370 91 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|255065682|ref|ZP_05317537.1| ## NR: gi|255065682|ref|ZP_05317537.1| putative membrane transporter [Neisseria sicca ATCC 29256] # 1 91 1 91 91 120 97.0 3e-26 MSPILPRPLHIAARIVLASAGSYWVSALAAGTVPLYAGGSTNAVYGGTLLGITLLPLVFL WALAARRLRTVFCVLSLSVLLLSAAGGLPHG >gi|289656360|gb|ADEA01000007.1| GENE 20 25924 - 27429 1437 501 aa, chain + ## HITS:1 COG:PA0801 KEGG:ns NR:ns ## COG: PA0801 COG3182 # Protein_GI_number: 15595998 # Func_class: S Function unknown # Function: Uncharacterized iron-regulated membrane protein # Organism: Pseudomonas aeruginosa # 7 430 3 419 506 185 31.0 2e-46 MAKEAGLRKVMAEIHTWTGLICSWVLFVIFLAGSIAFFRAELDVWMQPELPFSDDLPDER VSLATALDYLRRHAPNAAEWSVSLPTERSPYLDLGWTERGAEEASYTTISPYPDAPQSKP RETAGAGYLVSIHSNLAAAEYGGYWLTAAAAVVALAAVISGVIVHKKILAEFFTFRAGKK LRSWLDAHNLLGVLPLPFHVMIVYSGLLLTSHTVMTYSQTAAELSDEEFEARSAYVPRSS ENAGKRWEMADWYPTVQRLRPNGTDKEINLTITDPDRKEAVLSADYFDKRSIGSNPDLSV AVRLSDGAQVYRKDAYGGFEQIYSSLYSLHTAGFADYPTLWLYFFSGMAGCGMIATGAVM WPMKRRNRKQPPLCGIAWAERINIAVFAGFPLACAAFFCTNRLLPADWDGREIWEAQSLF AVWAAAAVAAFFPCPAHIKWRGLFYAAAALCALIPLLDIYVGRPLWLSIRSGDTLYWTME LCFLTFAAIFFLIARRIAKAQ >gi|289656360|gb|ADEA01000007.1| GENE 21 27432 - 27728 251 98 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298368875|ref|ZP_06980193.1| ## NR: gi|298368875|ref|ZP_06980193.1| chitin-binding lectin 1 (PL-I) [Neisseria sp. oral taxon 014 str. F0314] # 1 98 65 162 162 170 100.0 3e-41 MLYFLMFSLCFGGFFCLMLSQTPHAKTMLGRPVQHPARLRLAGATLHAAALVSALASPHP AAASTSWFGCLSVGAALCTVAVYFRGKGAGKKDKRSYD >gi|289656360|gb|ADEA01000007.1| GENE 22 27816 - 29912 3444 698 aa, chain - ## HITS:1 COG:NMB1988 KEGG:ns NR:ns ## COG: NMB1988 COG1629 # Protein_GI_number: 15677816 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Neisseria meningitidis MC58 # 19 698 16 714 714 391 37.0 1e-108 MNTRQPTKFHYSALVLALAAVFAHAENKQPVALTELDEVKVTATAVPTRVTRNQLDRETS TDLKQVMKDQIGMDVGGGNGVAQFYSIRGVGEDKINLEVDGTSQSTKIFHHQSRFQLDPA LVKSINVEKGTGAASAGLGAVGGTIRVTTVDAKDLLTDGKPFGFKLGAGLSSNKGSTGNA AVYGYQNGFDALFAGNFLNNRDYKDGNGNVNRGSRLKQHSYLAKLGYDFNDDHGIRLTYR QEYQKGNRTDKAEFQNVDSYVGVDGTYQKEQSYNLEYRGRNVGFLDKIDANVFQINTDDT KPPKGAPSPKAQASGTAQGGVPIGQLELSKIKATGANLNLASSFGEGHMVKYGVNYRHET SEPSDKGAWLKILGLYDRDKEKKAEYGVYAEGIWNLHPVTLTTGLRYDYFKYNAASRQSA SHGQLNPSIGAIWDINDNFSLLANLNQASRAPRLNEALLANERAGAAADLDSNLKAETAR RAELGFKWRNDNFNVSGSVFHQRIKDLIVYRWAKINNNTASITERGKIYNGGTLKTYGYE LDASYRWGGLTARAGVSYVKPRLNGEMYYGESPIQAEDHESSFTFWNTGRQWLTGLSYQF ENPKLEIGWRGRYAQSVKYTDVARGQGTIHGKKSGYGVHDIYANWQPLKKDNLNVNFAVN NIGNKQYRSHSQRFPDGNGRMPFYERGREFALGVNYRF >gi|289656360|gb|ADEA01000007.1| GENE 23 30227 - 32014 2422 595 aa, chain + ## HITS:1 COG:STM2948 KEGG:ns NR:ns ## COG: STM2948 COG0369 # Protein_GI_number: 16766254 # Func_class: P Inorganic ion transport and metabolism # Function: Sulfite reductase, alpha subunit (flavoprotein) # Organism: Salmonella typhimurium LT2 # 9 595 19 599 599 578 53.0 1e-165 MNQANPLPAELSAQLSALSPTQLAWLSGYCWAQSQGATAPLPEVSAVRPAPAARRVTVLS ASQTGNARRVAEQLHAGLKAAGVEARLTGAGDFKSKTLPDEDIVLLVTSTQGEGEPPEEA LPLYKFLSGKKAPDLGKLTFAVLGLGDSSYPKFCQAGKDFDAKLSGLGAGRLADLALCDL EFQAAADAWVAAVVPKVAELCAQSAAPAPTAQTAAASDGGEPVQSYTKERPYTAALSVRQ KITSRTAEKDVEHIEIDLSGSGIRYKAGDALGIWPVNAPELVKEILDLNNLSGNEAVKLA DGSETDIQTALSEAADITQNTPAFVRQYAELSDNAELKDIADDNAKLDAYLAATPPVGVL AANPHPLDAQTLLGLFRAQTPRLYSIASAQDEVGEEVHLTVGVVRFDHHGNTYTGAASGY IGARLEEGGEVRVFIEPNPHFRLPENGDTPVIMIGAGTGIAPFRAFMQQRSANGDSGKNW LFFGNQRLADDFLYQLEWVDFRKDGLLTRADLAWSRQGEHKVYVQHKIAEHAAEVWSWLQ QGAHVYVCGDATRMARDVEEALLEVIAGQGKLGRDEAEDYLNDMREDKRYQRDVY >gi|289656360|gb|ADEA01000007.1| GENE 24 32400 - 32924 776 174 aa, chain + ## HITS:1 COG:no KEGG:NMCC_1282 NR:ns ## KEGG: NMCC_1282 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_053442 # Pathway: not_defined # 8 174 1 166 166 142 50.0 5e-33 MTKATDKMNTVRKTLPQEARLHRCMMITDGNVSRANRDRTLPEQSDNLVSEALLPQIRAV AVMIAAMRHDFGPHSPVAFTDDADWFAARIIVLRARRFHLDITLLPMLKTANRRAQAFAR AHKLPFTPAEMHMSLHANRPADLLIVETEYEAEERGSMIANSLALAAKLPALPL >gi|289656360|gb|ADEA01000007.1| GENE 25 33035 - 33604 853 189 aa, chain + ## HITS:1 COG:no KEGG:NMCC_1281 NR:ns ## KEGG: NMCC_1281 # Name: not_defined # Def: membrane lipoprotein # Organism: N.meningitidis_053442 # Pathway: not_defined # 1 189 22 205 205 205 74.0 5e-52 MKKTVALAALSALALAACKDNTQAQLEQQQKQIEALQQQLAQQNGGQQDNTVYQLTPEGV KDTIPAEAQANGNNGQPVTGTDGQQYIYDQSSGSWLLQSLIGTAAGAFIGNALANKFTQA RNQNSPVAQRARTSYYQSARPNRRTTQQLNTRSLPAQNRAAATPNYRQTTRMQPNYRRPA MRGGFGRRR >gi|289656360|gb|ADEA01000007.1| GENE 26 33776 - 34738 708 320 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 8 312 5 304 306 277 47 3e-73 MSNHHKLIILGSGPAGYTAAVYAARANLKPVIITGVEQGGQLMTTTEVDNWPADAEGVQG PELMARFQAHAERFGTEMIFDQIHTVDLQNRPFTLKGDMGKYTCDALIVATGASAKYLGL PSEEAFAGKGVSACATCDGFFYKKQDVAVVGGGNTAVEEALYLANIANTVTLIHRRDSFR AEKIMVNKLMQRVEEGKIILKLNSNLDEVLGDEGGVTGARLKHNNGTTEEIAVKGVFIAI GHKPNTDIFKGQLDMDETGYLKTKGGTGDNVGATNIEGVWAAGDVKDHTYRQAITSAASG CQAALDAERWLDRQGLCDIS >gi|289656360|gb|ADEA01000007.1| GENE 27 34848 - 36689 2656 613 aa, chain + ## HITS:1 COG:NMA1540 KEGG:ns NR:ns ## COG: NMA1540 COG0322 # Protein_GI_number: 15794433 # Func_class: L Replication, recombination and repair # Function: Nuclease subunit of the excinuclease complex # Organism: Neisseria meningitidis Z2491 # 4 613 19 628 628 1220 96.0 0 MSQPQDFNLELFLKNLPNLPGVYRFFDEGGNVLYVGKAVNLKRRVSGYFQKNDHSPRIAL MVKQVHHIETTITRSEAEALILENNFIKALSPKYNILFRDDKSYPYLMLSGHQYPQMAYY RGTLKKPNQYFGPYPNSNAVRDSIQVLQKVFMLRTCEDSVFEHRDRPCLLYQIKRCTAPC VGHISEEDYRDSVRQAATFLNGKTDELTRTLQHKMQTAAANLQFEEAARYRDQIQALGIM QSNQFIDSKNPNNPNDIDLLALAVSDGLVCVHWVSIRGGRHVGDKSFFPDTKNDPEPNGQ DYAEAFVAQHYLGKSKPDIIISNFTVPDALKEALEGEHGKQMQFVTKTIGERKVWLKMAE QNAQMAIAQRRLQQSSQQHRIDELAKILNMNSDDLNRLECFDISHTQGEATIASCVVYDE QNIQPSQYRRYNITTAKPGDDYAAMREVLTRRYGKMQEAEANGETVKWPDVVLIDGGKGQ IGIAVSVWEELGLHIPLVGIAKGPERKAGMEELILPFTGETFRLPPNSPALHLLQTVRDE SHRFAITGHRKKRDKARVTSSLSDIPGVGSKRRQALLTRFGGLRGVVAASKEDLEQVEGI SKALAEKIYEYLH >gi|289656360|gb|ADEA01000007.1| GENE 28 37056 - 37628 383 190 aa, chain - ## HITS:1 COG:NMA1667 KEGG:ns NR:ns ## COG: NMA1667 COG3198 # Protein_GI_number: 15794561 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 179 1 179 182 275 71.0 3e-74 MSEQNKVKPWYKQAWPWILMAGPIFVVIASVSMFFVAKDNMTDLVTDDYYKDGKHIEIQL HRDEEAVKRKIRARLLVSPDYSAAKVFVSGDFDAKQPLNLLLMHPVKKTQDQTVRLQPVS DGQGKQTEYNAVFKPLPPTNHWYIRIEDVAGVWRVESKWIVSQGNSIDLTPMDKLLGNSG NAEAENGAVK >gi|289656360|gb|ADEA01000007.1| GENE 29 37634 - 39085 1300 483 aa, chain - ## HITS:1 COG:NMB1454 KEGG:ns NR:ns ## COG: NMB1454 COG0348 # Protein_GI_number: 15677310 # Func_class: C Energy production and conversion # Function: Polyferredoxin # Organism: Neisseria meningitidis MC58 # 2 483 17 498 498 876 85.0 0 MSTETRSPQSETSKVKPKSSVIQIHPEGERIHPKKAEGRFAKLRIAAVLATQFVFYVIPW FNWNGRQAVIFNIPDRHFFIFGLSLGMGDLIYLALLLMICAFGLFWWTTIAGRLWCGYSC PQTVYTEIMLWIDNLVEGDRNKRLKLEKSPWNFTKIRIKATKALLILLFCAWTGITFAGW FVPIRQFVPDLFAGAAGGGAMFAAAFYGFMTFFFAHVMREKVCLHMCPYARFQSAMFDKD TLIISYDTERGEPRGARKKTANKEESGLGDCINCTMCVQVCPVGIDIRNGLQYQCIGCAA CIDACDEIMDKMGYPRGLIRYTTEGALEHEYPESDIKKRLKRPRVAGYGAVLLVVIAAFL VGISTRKMVAVDILKDRGVMVRENSKGWLENAYNLRIINNSEREQIMTATVKGFDDISLT GLPPEGLKLPPRETITIPVQVSTIPEYADKGSHPIEFTFTYHESGSKQGNETVLKEESAF IGE >gi|289656360|gb|ADEA01000007.1| GENE 30 39539 - 41518 2971 659 aa, chain + ## HITS:1 COG:NMA1669 KEGG:ns NR:ns ## COG: NMA1669 COG0021 # Protein_GI_number: 15794563 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase # Organism: Neisseria meningitidis Z2491 # 1 659 1 659 659 1223 90.0 0 MSQLANAIRFLSVDAVQKANSGHPGAPMGMAEMAEVLWTKFLRHNPANPKFYNRDRFILS NGHASMLLYSLLHLTGYNLSIEDLKNFRQLHSKTPGHPEYGYTDGVETTTGPLGQGIANA VGMALAEKILAAEFNKDGLNIVDHYTYVFMGDGCMMEGVSHEACSLAGTLGLGKLIVLYD DNNISIDGKVDGWFTENIPQRFESYGWHVVPNVNGHDTAAIQTAIEAARAETGKPSLICC KTLIGKGSANKEGSHKTHGAPLGADEIEATRKHLGWTYPAFEIPQEIYAAWDAKEKGAKL EAEWNELFAQYQAKYPAEAAEFVRRMDKKLPENFDAYIQTALKEVCAKAETIATRKASQN SIEILAKELPELVGGSADLTPSNLTSWSNSQSITRNGGGNYIHYGVREFGMGAVMNGLAL HGGVRPFGATFLMFSEYERNAMRMAALMKINSVFVFTHDSIGLGEDGPTHQPIEQTATLR MIPNMAVWRPCDSVESLVAWAEAIKAPDHPSTLIFSRQNLKFLQRSEQQLNDIRRGGYVI SEAQGDAKAVIIATGSEVELALDAQAALAKEGIAVRVVSMPSTNIFDLQDTAYRNSVLPA ALPRVAVEAGLSQGWYKYVGLNGATVGIDRFGESAPAEVLFKEFGFTVENVVKVVKSVL >gi|289656360|gb|ADEA01000007.1| GENE 31 41717 - 43726 1923 669 aa, chain + ## HITS:1 COG:Cj1055c KEGG:ns NR:ns ## COG: Cj1055c COG1368 # Protein_GI_number: 15792382 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily # Organism: Campylobacter jejuni # 8 616 2 608 657 239 26.0 2e-62 MTRLLAYKRILYSCFLLWFCAVLILSAERCMMFQHYLPDTIRTRYAADTVHLFVKGLLFD IKAASVLTALPFLLGLFSLVKSKTAEAYGHIQVVLSVLLLLAVSAAAIGNWFYYGVYGRQ FDVFIFGISEEDTAAVLKTIWSDFPVIWGLVGAVAAAVLFGKWFARIRTYPFSEPAPAGK AAWIAVVILPILALSAGIRGSFGKFPLRQTSMQISAAPQLNKLVPNALISLNWAFLEHRN SSNFTPVSDSDGIALINRLLNQKAGADLNRLYSLTNENSAVEQHKPNVVLAVMESMSTHL LTMNTPERDLLGELAEHWKQDWIYQRFVSEGDGTSDTLHRFFIRSPRLNLSQSAAKNKTF PGNMFKPYLDAGYRVVYITAGNGGWRDFDNFLRHLGVNDIIDENTLKSHYPEAESGTWGV PDEFMFRYAEKELAQAEKSGKSVFIMMMSVTNHPPYRLPAPHQAKNFRLTEQEKQRLTAL ASGKELNEIFNTFRYSNDQLGRFISKAKTIAPDTIIAATGDHNMRAIDYPEPNETALGHS VPFYLYIPPAYRTHAAYHPERAGSHKDILPTLYNLSLSKARYYQTGCNLTAPQPDSPWCG YGYNPEVLITEHGFYNLSNKEFRRWNNRGVQTAETMPSKPPAEDRPYIDRGSAYTSFLDW QINRIVTMQ >gi|289656360|gb|ADEA01000007.1| GENE 32 43789 - 44793 1683 334 aa, chain - ## HITS:1 COG:NMB0828 KEGG:ns NR:ns ## COG: NMB0828 COG0451 # Protein_GI_number: 15676725 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Neisseria meningitidis MC58 # 1 333 1 333 334 635 93.0 0 MTIIVTGAAGFIGSNIVKALNQRGITDIVAVDNLTRGEKFKNLAECEIAHYLDKHEFIRQ VRGHLLPYENIEAVFHQGACSDTMNYDGLYMMDNNYQYTLDLLDWCQDERIPFLYASSAA VYGKGEIFREERELEKPLNVYGYSKFLFDQVLRRRMKEGLTAQVVGFRYFNVYGQHEQHK GRMASVAFHHFNQYREHGYVNLFGANDGYGNGEQTRDFVSVEDVAKVNLYFFDHPNLSGI YNLGTGRSRQFNELAAATVNACRAAEGKEEMTLEELVREELIRYIPFPDALKGKYQSFTQ ADIGKLREAGYQEEFLDVKEGVGNYVKWMLENLI >gi|289656360|gb|ADEA01000007.1| GENE 33 44883 - 45845 1489 320 aa, chain - ## HITS:1 COG:NMB0825 KEGG:ns NR:ns ## COG: NMB0825 COG2870 # Protein_GI_number: 15676723 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase # Organism: Neisseria meningitidis MC58 # 1 320 1 320 323 591 95.0 1e-169 MPTKFQQETLKSRFAQAKVLVVGDVMLDRYWFGDVSRISPEAPVPVAKIGRIDQRAGGAA NVARNIASLGGKAGLLSVTGDDEAANALDALMAQDGVASYLMRDKQIATTVKLRVVARNQ QLIRLDFEEHPNREVLEQIKQKYREVLPEYDAIIFSDYGKGGLSHISDMIDWAKHAGKTV LIDPKGDDYEKYAGATLITPNRAELKEVVGSWKNESELTEKAQNLRRHLDLTAVLLTRSE EGMTLFSEGEPIYQPTRAQEVYDVSGAGDTVIAGVGLGLAAGYTMPEAMHLANTAAGVVV AKLGTAVCSFAELNKALEEQ >gi|289656360|gb|ADEA01000007.1| GENE 34 45900 - 46640 1072 246 aa, chain - ## HITS:1 COG:NMB0824 KEGG:ns NR:ns ## COG: NMB0824 COG0284 # Protein_GI_number: 15676722 # Func_class: F Nucleotide transport and metabolism # Function: Orotidine-5'-phosphate decarboxylase # Organism: Neisseria meningitidis MC58 # 1 246 1 246 246 451 97.0 1e-127 MNPLITDFQTPQQRTPVIVALDFANEKDTLGFVRNLDPTLCQIKIGKELFTATGRSLAES LIHQGFKLFLDLKYHDIPHTVAQACKVAADMGVWMVDMHASGGRRMMEAAAEAVAGYGTK PLLIGVTVLTSMEQSDLAEIGLNIAPEEQVIRLAKLAQSSGLDGVVCSAQEAAPLRRELG QDFVLVTPGIRLDVAGNNDDQRRIMTPAEALTAGSTYLVMGRPVTQAADPVAVLREVNRV ANLEAN >gi|289656360|gb|ADEA01000007.1| GENE 35 46778 - 47425 1227 215 aa, chain - ## HITS:1 COG:NMA1032 KEGG:ns NR:ns ## COG: NMA1032 COG0563 # Protein_GI_number: 15793988 # Func_class: F Nucleotide transport and metabolism # Function: Adenylate kinase and related kinases # Organism: Neisseria meningitidis Z2491 # 1 215 1 215 215 396 99.0 1e-110 MKVLLLGAPGAGKGTQAQFITAAFGIPQISTGDMLRAAIKAGTPLGLEAKKIIDEGGLVR DDIIIGMVKERIAQDDCKNGFLFDGFPRTLAQAEAMVEAGVDLDAVVEIDVPDSVIVDRM SGRRVHLASGRTYHVTYNPPKVEGKDDVTGEDLIQRDDDKEETVKKRLAVYHEQTEVLVD FYSKLEGEHAPKYIKVDGTQPVEAVKAEVLGALGK >gi|289656360|gb|ADEA01000007.1| GENE 36 47508 - 48026 794 172 aa, chain - ## HITS:1 COG:no KEGG:NMC0625 NR:ns ## KEGG: NMC0625 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 5 102 9 106 133 160 79.0 1e-38 MTDLRHLSREEQKLLANVALLVQNDDQEFNYEMLKAAAPDEASGEFWFRMAETLSTLPPN RSLDLRLNGGRLTVAASILSVLLQDSPEIPQLWAQKVIALNYLAHGHQTRARGLAQQADK AAEANEEEYLAKTLSQNLLSTLKDALERFPEDTWFAEMRDDAWKHFGAEQAV >gi|289656360|gb|ADEA01000007.1| GENE 37 48037 - 48798 1042 253 aa, chain - ## HITS:1 COG:NMB0675 KEGG:ns NR:ns ## COG: NMB0675 COG1212 # Protein_GI_number: 15676573 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: CMP-2-keto-3-deoxyoctulosonic acid synthetase # Organism: Neisseria meningitidis MC58 # 1 253 1 253 253 440 94.0 1e-123 MTEFVVLIPARLDSSRLPGKALADIHGKPMVVRVAEQAAKSKAARVVVATDHPDIQTACQ AHGVEVVMTSNRHESGTTRLAEAAAALKLPQHLVVVNVQGDEPLIAPELIDRTAEVLVEN NVQMATAAHELHNFDEFMNPNVVKVVLDKNRNAIYFSRAPIPYPRDAMRAEKRELPAETA VLRHIGIYAYRAGFLQRYAEMSVSPLETIESLEQLRVLWHGYPIAVETAKEAPAAGVDTQ EDLDRVRAVFEAV >gi|289656360|gb|ADEA01000007.1| GENE 38 48795 - 48977 418 60 aa, chain - ## HITS:1 COG:NMA0874 KEGG:ns NR:ns ## COG: NMA0874 COG2835 # Protein_GI_number: 15793843 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 1 60 1 60 60 107 100.0 7e-24 MEKKFLDILVCPVTKGRLEYHQDKQELWSRQAKLAYPIKDGIPYMLENEARALSEEELKA >gi|289656360|gb|ADEA01000007.1| GENE 39 49041 - 49622 433 193 aa, chain - ## HITS:1 COG:NMA0873 KEGG:ns NR:ns ## COG: NMA0873 COG3184 # Protein_GI_number: 15793842 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 189 3 192 195 226 56.0 2e-59 MKLKTVLLPFAALALCANVFAAPPSNASLERWLDTQNYDRDVEKNMIDSFNVAFQPYADN AVAQAPADKREQVAKAVDRYRENVLRGFITPELKRKLRQTLLESAKTTFTQEEIDGMTAF YSTPVGKSVLAKTPLFINKTMNKLMVGRPSEINDVTKRYLPEFEKEMQQIMCGGKNPHKN CTKPQQGKKAGSR >gi|289656360|gb|ADEA01000007.1| GENE 40 49733 - 50749 956 338 aa, chain - ## HITS:1 COG:NMA0872 KEGG:ns NR:ns ## COG: NMA0872 COG1663 # Protein_GI_number: 15793841 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Tetraacyldisaccharide-1-P 4'-kinase # Organism: Neisseria meningitidis Z2491 # 3 337 6 340 344 580 89.0 1e-165 MPKLHQIIERHWQCPNPFLSFLLKPLSKLFAKIAAKRRDDFVSGRLKSEKLPVPVVVVGN IHAGGTGKTPIVAALVSGLQEKGVKVGIISRGYGRKSKAVHVLNAESRAEDAGDEPLLLF RKTGAPTAVGSSRAEAGRALLAAHPDIGLIVADDGLQHYALRRDVEIVVFPSADTGRTDL DLLPNGNLREPLSRLDSVDAVVVSGGKADASFAPSENMFHSRIETGQIYRLNQPSEILDT GRLKKQTVAAVAGIAKPERFFDSLRSMGITLNQTVALPDHADIAAADLPDADAVIITEKD AVKFSDGLNLNHVWVLPVCAIIEPDLAEFVLERLEDVS >gi|289656360|gb|ADEA01000007.1| GENE 41 50776 - 51951 634 391 aa, chain - ## HITS:1 COG:no KEGG:NMO_0158 NR:ns ## KEGG: NMO_0158 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 1 373 1 358 375 169 32.0 1e-40 MKHILIDFENVQPEASQLSGVDDENCHIWLFLGKLQQKTLSVELCEALCRFGKNVHFVRV AKTGKNALDFYLAYYLGKITEQDKEALICILSRDGGFDVLVEHLEDTHLCKGIVRLGSLE DAGKNEELLLEMRKKDEETSIVDPLHSTLLTACFKKASQHLINCQKDSNLVLNTPKAMQD LEQYLLSSVLQVDLQHLDKEQQQKIIKAVVEHMINKELITLNPVNNHLQFHFSQDELLAT LLQHVERSKPKTVCALQNVLRTKANSIGLNSEDNDLKQMIRYCATQKILKVKGEKVEYFS QVEINKEVLKTNGGVVKKFIVSQKEDLRIMQEVQAFFERRQKNRPASRKTLTNAFKSALK LEDGHIEMLIDRLAKQGKLFTVSESGKIIYK >gi|289656360|gb|ADEA01000007.1| GENE 42 52101 - 53456 1702 451 aa, chain + ## HITS:1 COG:NMB1363 KEGG:ns NR:ns ## COG: NMB1363 COG1570 # Protein_GI_number: 15677228 # Func_class: L Replication, recombination and repair # Function: Exonuclease VII, large subunit # Organism: Neisseria meningitidis MC58 # 1 449 1 449 451 776 89.0 0 MSELFAPSSISVSELNALAKALLEDHLAGLWIAGEVSNLTRAASGHYYFSLKDSRAQVRC AMFKGAAARLAKPLKEGDHIEVAGKISIYEARGEFQITVNEVRLKGLGQLYEAYERLKTQ LQAEGAFAAERKKPLPARPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPTAVQGTG SEFQIAQAIKTASQRAECDVLIVCRGGGSIEDLWAFNEEPVVRAIEACAIPVVSGVGHET DFTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAKGRLKTVLEQRYFDASQKLDWLA RQIRHPRQKLDEQRTYIHKLAQTLSYSMTQNVRAHTARFERQTQALKHCRPDISVYRQDI NRFQTTLSHAFRQLLAHRRQSLMAQTALLEAVSPQQILERGFSVVKNTRGQVIRNANVLK QGQKLHITFADGETDVRVTKEQAQRELFDFS >gi|289656360|gb|ADEA01000007.1| GENE 43 53599 - 54096 560 165 aa, chain - ## HITS:1 COG:PM1470 KEGG:ns NR:ns ## COG: PM1470 COG1881 # Protein_GI_number: 15603335 # Func_class: R General function prediction only # Function: Phospholipid-binding protein # Organism: Pasteurella multocida # 1 165 6 170 170 283 81.0 1e-76 MRVTSAAIVNGEFEDKYGKRGGQFSPNGMPTYSVPFEISGAPEGTKSFAVVLEDKDAVTA SGFVWIHWLIADLERTSVVENESVSAKDYVQGANSWASVLGKFEIEEASCYGGMTPPNCR HRYELIVYALDTKLNLPRGFRFNDLHFAMQGHVLASASVMGTYDV >gi|289656360|gb|ADEA01000007.1| GENE 44 54335 - 57097 4368 920 aa, chain + ## HITS:1 COG:NMB1384 KEGG:ns NR:ns ## COG: NMB1384 COG0188 # Protein_GI_number: 15677247 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Neisseria meningitidis MC58 # 1 911 1 911 916 1623 91.0 0 MTDATIRNDHKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAM HELKNNWNAAYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSMRYVLIDGQGNFGSV DGDGAAAMRYTEIRMAKIAHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPALLVNGSS GIAVGMATNIPPHNLTDTINACLRLLDEPETEIDELINILQAPDFPTGATIYGLSGVREG YKTGRGRVVMRGKTHIEPIGKNGEREAIIIDEIPYQVNKAKLVEKIGELVREKTLEGVSD LRDESDKSGMRVVIELKRNENAEVVLNQLYKLTQLQDSFGINMVALVDGQPRLLNLKQIL AEFLRHRREVVTRRTLFRLKKARHEGHIAEGKAVALSNIDEMIRLIKESADAPEAKEKLL SRAWRSGLVEDMLSRTDLDLRMARPEGLPANLGLQEQGYYLSEIQADAILRMSLRNLTGL DQEEIVGDYKNIMAKIIDFLDILAKPERITQIIREELEETKTNFGDERRSEINPFGGDIA DEDLIPQREMVVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDY LMCFTNLGKCHWIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAVREFPEDQYVFFA TAQGMVKKVQLSAFKNVRSQGIKAIALKEGDYLVGAAQTSGSDDIMLFSNLGKAIRFNEY WEKSGNDEAEDADIETEISDDLEDETADNENALPSGKHGVRPSGRGSGGLRGMRLPADGK IVSLITFAPEAAQSDLQVLTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVAA TLVGETDDLMLITSGGVLIRTKVEQIRETGRAAAGVRLINLDEGETLVSLERVAKEPEDE SNEDLQDTGTEVGQEIPSDD >gi|289656360|gb|ADEA01000007.1| GENE 45 57232 - 58608 1658 458 aa, chain + ## HITS:1 COG:NMA1356 KEGG:ns NR:ns ## COG: NMA1356 COG0773 # Protein_GI_number: 15794277 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate-alanine ligase # Organism: Neisseria meningitidis Z2491 # 1 458 1 458 458 893 94.0 0 MKHIHIIGIGGTFMGGVAAIAKEAGFKVSGCDAKMYPPMSIQLEALGIDVHEGFDAAQLD EFKADVYVIGNVAKRGMDVVEAILNRGLPYISGPQWLSENVLHHHWVLGVAGTHGKTTTA SMLAWVLEYAGLAPGFLIGGVPENFSVSARLPQTPRQDPNSKSPFFVIEADEYDTAFFDK RSKFVHYRPRTAVLNNLEFDHADIFADLGAIQTQFHHLVRTVPSEGLIVCNGQQQSLQDT LDKGCWTPVEKFGTEHGWQVGEVNADGSFDVLLDGKKAGHVAWDLMGGHNRMNALAVIAA ARHAGVDIQTACEALSAFKNVKRRMEIKGTVNGITVYDDFAHHPTAIETTIEGLRQRVGN ARILAVLEPRSNTMKLGTMKAALPESLKGADQVFCYAGGVDWDVAEALAPLGGKLHVGQD FDAFVAEIVKNAEAGDHILVMSNGGFGGIHGKLLEALQ >gi|289656360|gb|ADEA01000007.1| GENE 46 58970 - 59209 151 79 aa, chain + ## HITS:1 COG:NMB1552 KEGG:ns NR:ns ## COG: NMB1552 COG3547 # Protein_GI_number: 15677404 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Neisseria meningitidis MC58 # 3 76 49 120 318 79 54.0 1e-15 MYQKISISMEATGIYYEQAAKCLSVSTLYTVFIINPLKIRDYAKSRFDHTKTDKADSKPI TNYVHAAKGSFVRFTLETI >gi|289656360|gb|ADEA01000007.1| GENE 47 59345 - 60415 2026 356 aa, chain - ## HITS:1 COG:NMB1031 KEGG:ns NR:ns ## COG: NMB1031 COG0473 # Protein_GI_number: 15676918 # Func_class: C Energy production and conversion; E Amino acid transport and metabolism # Function: Isocitrate/isopropylmalate dehydrogenase # Organism: Neisseria meningitidis MC58 # 1 356 1 356 356 696 98.0 0 MTKHIAILRGDGIGPEIVAETVRVLDKLIAQGLDASYEYAPLGGEAYDEYGHPYPEFTQN LCRKADAVLLGAVGSPQYDNLDRPLRPERGLLAIRKDLNLFANLRPAILYPELANASTLK PEIVAGLDILIVRELTGDIYFGEPRGIRVLENGEREGYNTMKYSESEIRRIAHVAFQSAQ KRSKKVCSVGKANVLETTELWREIFEEIGKQYPDVELSHMYVDNAAMQLVRAPKQFDVIA TGNIFGDILSDEASMLTGSIGMLPSASLDENGKGLYEPSHGSAPDIAGQNKANPLATILS LAMLLRYSLNDEARAQQVENAVQKVLQQGLRTGDIYEEGTKLVSCSEMGDAVLAAL >gi|289656360|gb|ADEA01000007.1| GENE 48 60404 - 60685 134 93 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298368901|ref|ZP_06980219.1| ## NR: gi|298368901|ref|ZP_06980219.1| hypothetical protein HMPREF9016_00569 [Neisseria sp. oral taxon 014 str. F0314] # 1 93 28 120 120 187 100.0 1e-46 MFGHNLENPSLELGKRKYGLFYCLSKSFDRCGKQVIECIYHENLMFLKVERPVLCKRIVK DIWVKSLKFFLSRKLIENSILLWNIKNALLREL >gi|289656360|gb|ADEA01000007.1| GENE 49 60751 - 60924 302 57 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKIVNQLVLASVIALGLAACSNSSTDTPSADTANAGQVEQNSGTAVAPVAPSSTTAM >gi|289656360|gb|ADEA01000007.1| GENE 50 61015 - 61479 587 154 aa, chain - ## HITS:1 COG:CAC0836 KEGG:ns NR:ns ## COG: CAC0836 COG2731 # Protein_GI_number: 15894123 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase, beta subunit # Organism: Clostridium acetobutylicum # 1 147 1 150 152 83 32.0 2e-16 MITDTITNAARYAALHPDFAEAIHLLQTLDFAALPDGQVPCKNPNIRLFVGSEPMRSKAE AKPEAHLKHIDIQVPINGEEAYGWIDRGRLKNGLGYNEERDIEFFDCTPETWLTLQPGEF ALFFPNDAHAPLIGMQETIRKAVFKIRTVDTRIP >gi|289656360|gb|ADEA01000007.1| GENE 51 61604 - 62569 984 321 aa, chain - ## HITS:1 COG:no KEGG:Coch_0727 NR:ns ## KEGG: Coch_0727 # Name: not_defined # Def: hypothetical protein # Organism: C.ochracea # Pathway: not_defined # 6 317 26 338 344 346 56.0 7e-94 MNSDQLRSLVSAATRAPSGHNTQPWHFTAKDDEIVISPDYSRELPAVDGNRRELFISLGC AAENLCLQASVLGYATETLLDGDNIRLRLQASEQTAADPLAAYINQCQTNRSMYNGSLIP EGSLQTIPLQPSADGIKIHLFGRQSETFRLLTEAVIQGNAAQMADPAFKTELLSWIRFNK KHAEHSNDGVSYAALGAPNLPRWLSEPIVKLMLNADTQNKADRKKIAVSSHLALITSPAD HIADWVATGRSLQRFLLRLTQQGIAHAYLNQPCEVSTLRQQLQSELFPNGGEQPQLLLRL GYAAPLPFARRRPLHEVIQQP >gi|289656360|gb|ADEA01000007.1| GENE 52 62758 - 63399 878 213 aa, chain - ## HITS:1 COG:NMA1452 KEGG:ns NR:ns ## COG: NMA1452 COG0066 # Protein_GI_number: 15794357 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase small subunit # Organism: Neisseria meningitidis Z2491 # 1 212 1 212 213 431 97.0 1e-121 MKAFTKITAIVAPLDRSNVDTDAIIPKQFLKSIKRSGFGPNAFDEWRYLDHGEPGMDNSK RPLNPDFSLNQPRYQGAQILLTRKNFGCGSSREHAPWALDDYGFRAVIAPSFADIFFNNC YKNGLLPIVLTEEQVDQLFKEVEANEGYQLSIDLAEQTLTTPSGETFKFDITEHRKHCLL NGLDEIGLTLQHADEIRDFEEKRRRSQPWLFNS >gi|289656360|gb|ADEA01000007.1| GENE 53 63479 - 63700 380 73 aa, chain - ## HITS:1 COG:no KEGG:NMC1178 NR:ns ## KEGG: NMC1178 # Name: not_defined # Def: putative lipoprotein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 73 18 101 101 87 65.0 2e-16 MNKLLITALATLALSACSSTWHGTKEDAGRNWDKTENAAERGWDNTKEAVKKGGNAVGRG ISHVGEKLENATE >gi|289656360|gb|ADEA01000007.1| GENE 54 63801 - 65207 2213 468 aa, chain - ## HITS:1 COG:NMA1450 KEGG:ns NR:ns ## COG: NMA1450 COG0065 # Protein_GI_number: 15794355 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase large subunit # Organism: Neisseria meningitidis Z2491 # 1 468 1 469 469 902 96.0 0 MSAQTLYDKLWNSHVVREEDGTVLLYIDRHLVHEVTSPQAFEGLKMAGRKLWRIDSVVST ADHNTPTGDWDKGIQDPISKLQVDTLDKNIKEFGALAYFPFMDKGQGIVHVMGPEQGATL PGMTVVCGDSHTSTHGAFGALAHGIGTSEVEHTMATQCITAKKSKSMLIAVEGRLKPGVT AKDVALYIIGQIGTAGGTGYAIEFGGEAIRSLSMEGRMTLCNMAIEAGARSGMVAVDQTT INYVKDKPFAPKGEAWDKAVEYWRTLVSDEGAVFDKEYRFNAEDIEPQVTWGTSPEMVLD ISGKVPNPAEETDPVKRSGMERALEYMGLEAGTPLNEIPVDIVFIGSCTNSRIEDLREAA AVAKGRKKADNVQRVLIVPGSGLVKRQAEQEGLDKIFIDAGFEWREPGCSMCLAMNADRL TPGQRCASTSNRNFEGRQGNGGRTHLVSPAMAAAAAVTGHFTDIRTMA >gi|289656360|gb|ADEA01000007.1| GENE 55 65475 - 66830 2068 451 aa, chain + ## HITS:1 COG:no KEGG:NMA1449 NR:ns ## KEGG: NMA1449 # Name: not_defined # Def: putative glutamate--cysteine ligase (EC:6.3.2.2) # Organism: N.meningitidis_A # Pathway: Glutathione metabolism [PATH:nma00480]; Metabolic pathways [PATH:nma01100] # 1 449 1 449 449 877 95.0 0 MKLPVMAAEHLSQLQAFEAKILCNHAKIEAWFRSQWNAHRPPFYGSVDIRNAGYKISSID MNLFPGGFNNLNPNFIPLAAVAAQDAVQRACETAKSVLIIPENHTRNTFYLQNVYALSEI LRSAGYEVRLGSLNPEVTEPTEFETALGDKILLEPLLRTRERVHLADGFSPCVVLLNNDL SAGVPDILKGISQTVLPPLHGGWTTRRKTEHFSAYNQVAAEFAKLIDIDEWQINPYFEKI GGLDFQEREGEEALAEAVERVLAKIQAKYDELGITDQPFVIVKADAGTYGMGVMSVKSAD EVRGLNRKNRNKMAKVKEGLEVSEVIVQEGIYTYETMNGAVCEPVVYMMDRFVIGGFFRV HEGRGADENLNAGGMVFVPLSNSIPTGSGDNSQEAPEACKRVFEQWDSLGMPRSEKDCDV DNEHNRLYVYGVMARLSLLAAALELEQTAPI >gi|289656360|gb|ADEA01000007.1| GENE 56 67503 - 68282 794 259 aa, chain + ## HITS:1 COG:NMB1436 KEGG:ns NR:ns ## COG: NMB1436 COG0247 # Protein_GI_number: 15677294 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Neisseria meningitidis MC58 # 1 259 1 259 259 512 92.0 1e-145 MSTITPPQITTFDNKPTDVYFFGTCVLDIFMPEAGMDAITLIEQQGIRVHFPMAQSCCGQ PAYSSGHPTEAFDVAKAQLDLFPENWPIVVPSGSCGGMMKHHWPTLFKNTEYESKAVDCA NRIIEFTHFLLAIGYKPEDKGEPVKVAVHTSCAARREMNVHISGWQLIDGMENVERIVHD HESECCGFGGTFSVKQADISGAMVTDKVAALKETGATEIISADCGCMMNIGGKIAKDEPN MPRPKHIASFLLERTGGKA >gi|289656360|gb|ADEA01000007.1| GENE 57 68279 - 68980 847 233 aa, chain + ## HITS:1 COG:NMB1437 KEGG:ns NR:ns ## COG: NMB1437 COG1556 # Protein_GI_number: 15677295 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis MC58 # 1 233 1 233 233 459 96.0 1e-129 MSARENILAKLKKADALPMEEPAVFDYYREMGVSWDSEVERLKHWAAAMRAVKTEIYWVT KTSWPQVFRQAAEGKGLKNILLPLATEHGQIARAALVDSNIEPIAFEREIDTWKTEFFTN IDAGFSGSQCGIARTGTLMLFSSPEEPRTLSLVPPVHFCLFDTAKMYNEFHNAVEGEKLV ENGMPTNVFLISGPSKTADIQLTLAYGAHGPRDLVILAILPDHISPADLEENA >gi|289656360|gb|ADEA01000007.1| GENE 58 68977 - 70422 1483 481 aa, chain + ## HITS:1 COG:NMA1650 KEGG:ns NR:ns ## COG: NMA1650 COG1139 # Protein_GI_number: 15794544 # Func_class: C Energy production and conversion # Function: Uncharacterized conserved protein containing a ferredoxin-like domain # Organism: Neisseria meningitidis Z2491 # 1 481 1 481 484 954 97.0 0 MTTQTIKFHMKPETFKQNAAISLQDKPLRKSLRTAMDMLMTKRKAVLTDEEELQSLRDLC EHVRQRSLSKLPALLEQLEENLTKLGVKVHWAETPAEACQIIHDIITAKNGKLMVKGKSM VSEEIELNHYLEAKGIKAVESDLGEFIVQMAGEKPTHIVMPAIHKTKEQVSELFHQNLGT PLTDDVDQLTGFARKALRDIYSTADVGLSGVNFAVAETGTLCLVENEGNGRLSTTVPPVH IAITGIEKVVAKLSDVPPLYSLLPRSAIGQNITTYFNMITGPRRSEELDGPQEMHLVLLD NGRSQAYAEDQMRRTLQCIRCGACMNHCPVYTRIGGAAYGTTYPGPIGEIISPHLLGLEA TRDLPTACTMCGACVEVCPVRIPITEQMQRLRVEAQRSPSEVVPHPIRGQGASHTFGEQM AWRTFNGIFSGSKAYRAFGWAATKFRALTPSKQMGWTDNRVPMKPAKKTLHEMMAEKMRN K >gi|289656360|gb|ADEA01000007.1| GENE 59 70550 - 70768 444 72 aa, chain - ## HITS:1 COG:NMA1258 KEGG:ns NR:ns ## COG: NMA1258 COG2841 # Protein_GI_number: 15794191 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 72 1 72 72 88 79.0 3e-18 MFPEYRDLIAKLKQEDAHFARLFDEHNELDDKITGLVNNPVTGGLDEIEELKKQKLQLKD RLYEILRKADGK >gi|289656360|gb|ADEA01000007.1| GENE 60 70964 - 71713 844 249 aa, chain + ## HITS:1 COG:lin2216 KEGG:ns NR:ns ## COG: lin2216 COG0778 # Protein_GI_number: 16801281 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Listeria innocua # 1 224 1 222 243 189 43.0 4e-48 MKTAVETIKSHRVFRHFKSDRPLAAEEIQTIIDCARQAPSWMNGQHYTIINITSPELRAR IAALQPANPQIASCSTFLIFIADLHRAKLCSEAYGGTFAAAGHSDSLITAVTDASLAAQN AVVAAESLGYGTCFIGGIRFIADDIIGLLQLPEHTFPLFGLCIGVPDIEMRVKPRLPKNT VYAENRYPDDAILSDGLKQYEQTMTEFGEARETLPYREKFARYYSSAEPKNEPLIYRQGW LVPHRDEKI >gi|289656360|gb|ADEA01000007.1| GENE 61 71769 - 72056 414 95 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298368915|ref|ZP_06980233.1| ## NR: gi|298368915|ref|ZP_06980233.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 95 24 118 118 163 100.0 3e-39 MPVNDADWDNTPILDEDFFLNTEPVYSPDAQMPQLELPDNIKVFSEEARALDRKRLEALA LMELAKNLKAAQAEYDLEKLIEKIDFHLKQDDIFQ >gi|289656360|gb|ADEA01000007.1| GENE 62 72235 - 73485 2304 416 aa, chain + ## HITS:1 COG:NMA1254 KEGG:ns NR:ns ## COG: NMA1254 COG0112 # Protein_GI_number: 15794188 # Func_class: E Amino acid transport and metabolism # Function: Glycine/serine hydroxymethyltransferase # Organism: Neisseria meningitidis Z2491 # 1 416 1 416 416 761 92.0 0 MFSKSVTIQQYDPELAAAISAENQRQQDHVELIASENYVSCAVMEAQGSQLTNKYAEGYP GKRYYGGCEYVDIAEQLAIDRVKKLFGAEYANVQPHSGSQANQAVYTSVLQPGDTILGMS LAHGGHLTHGASVNISGKLYNAVTYGLDENEVLDYAEVERLALEHKPKMIVAGASAYALI IDWARLREIADKVGAYLFVDMAHYAGLIAAGEYPNPVPFADFVTTTTHKTLRGPRGGVIL CRDTTHEKALNSAIFPSLQGGPLMHVIAAKAVAFKEALQPEFKEYAKQVKTNAAAMAEEL IKRGLRIVSGRTESHVFLVDLQPMKITGKAAEAALGKAHITVNKNAIPNDPEKPFVTSGI RIGSAAMTTRGFTEADARELANLVADVLANPDDEANLAKVRAAVTALCDRHPVYGA >gi|289656360|gb|ADEA01000007.1| GENE 63 74000 - 75547 1900 515 aa, chain + ## HITS:1 COG:lin1461_2 KEGG:ns NR:ns ## COG: lin1461_2 COG1732 # Protein_GI_number: 16800529 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) # Organism: Listeria innocua # 234 510 26 298 299 311 56.0 2e-84 MSDFLPVPPAELWQATLEHLRLSLIALLCAVALAVPLAVWLADKRRWAEGVLQVTNILQT IPSLALLGLLIPFVGIGSPPVLIALTLYALLPIFQNTYLGLSQIDPAIKEAHTAFGLSRW QALWRIELPMALPAMISGIRTASVLIIGTATLAALIGAGGLGNLILLGIDRNNMAMTFTG ALLSALLAVLVSGGIVLLQKSKRKLSITAVLLIVLGTISFSHVFQNTEPARGTASQSKIT IAGKLGSEPDILINMYKQLIEENNPRAQVMLKPNFGKTSFLFNALNSGEIDIYPEFTGTV LESLVKVPAEQQNRRLSPEQTYQTAKDLLARQHRLTFLPPMAYQNTYALAVSQDYAAAHN LHKISDLKRVQNQIRAGFTLEFTDRPDGYKGLQQHGIQFSHLSTLEPALRYTALLNGKID LVEAYSTDSDLKQYRLAVLSDDIALFPSYQGAPLMKTEFAEEHPDIVNALNKLAGKISEA EMTEMNYRVKVGGEKPADVARDYLQKNGLINGAGK >gi|289656360|gb|ADEA01000007.1| GENE 64 75783 - 76451 1035 222 aa, chain + ## HITS:1 COG:Cgl0917 KEGG:ns NR:ns ## COG: Cgl0917 COG4912 # Protein_GI_number: 19552167 # Func_class: L Replication, recombination and repair # Function: Predicted DNA alkylation repair enzyme # Organism: Corynebacterium glutamicum # 10 215 14 206 208 153 41.0 3e-37 MDYPALLAVLQQHANPERAVPMQAYMKHRFAYLGIGKPVLARLCHPFFKGAAKQPVDWDF VHRCWDDPHRELQYAALEYLKKMQQHLTPQDIPRLQTLITEKSWWDSSDVLDRIIGDIAL RHPEVNNVLLAWSTDENIWLRRVAIDHQLLRKQHTDTALLETIICNNLGQKEFFINKAIG WALRDYSKTNPEWVQGFIDHHRHEMAKLSLREAGKYLPPKAV >gi|289656360|gb|ADEA01000007.1| GENE 65 76488 - 77036 221 182 aa, chain + ## HITS:1 COG:lin1093 KEGG:ns NR:ns ## COG: lin1093 COG4815 # Protein_GI_number: 16800162 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 29 165 4 141 151 73 35.0 3e-13 MTPNNQTGASWYADPSQGSIPDSFNLFQEQFLKPLGKTAVNIEREKESAEYGSVRFEIDG QTCLYRQAKHTPKKVGQFAALWKRPAMSGEIAPFDYDDGIDRVIILVGEHPRFGVFVFPC RLLVEKDIFSEKSIGGKRAFRVYAPWVMPSAAQAKRAKIWQCDHFVELTDTTQGLAQLAK VL >gi|289656360|gb|ADEA01000007.1| GENE 66 77225 - 78166 923 313 aa, chain + ## HITS:1 COG:NMB1603 KEGG:ns NR:ns ## COG: NMB1603 COG1275 # Protein_GI_number: 15677453 # Func_class: P Inorganic ion transport and metabolism # Function: Tellurite resistance protein and related permeases # Organism: Neisseria meningitidis MC58 # 2 313 3 313 314 325 69.0 7e-89 MSTKKFPIPLSYFSMPLGLFALGLSWRYGAHIGLLPNWAAETLLAAAFVLWLPLVVAYII KIRFFRPEFLQDLQDLVQCCFISAIPITTMLAGLAALPYQTLPAKGLILLGTAGQLAFAM YRAGGLWRGVHTLDATTPIIYLPTVATNFVSATAMAALGWSDYAWLFLGAGLFSWLSLEA AILSRLRTGTPVNAPVRGIVGIQLAPAFVGCGAYFAASGGHIDTFALLLIGYGCLQFLLL LRLLPWMLEQGFSPSFWGFSFGLAAMTGCGFHLIAEQRLLFLGYFLAITGSGLVMLLLLA TLNLARQGRLLVK >gi|289656360|gb|ADEA01000007.1| GENE 67 78312 - 78779 612 155 aa, chain - ## HITS:1 COG:no KEGG:RPA1910 NR:ns ## KEGG: RPA1910 # Name: not_defined # Def: hypothetical protein # Organism: R.palustris # Pathway: not_defined # 6 145 2 141 150 145 57.0 4e-34 MNRNTLRKIHAAAGAGAFLFIASFWSSTVFSELFGSHETVAAVKQTIVYALFGLIACMAT AGATGMKMGGKSKHAAIAAKRRRMPFIAANGVLILLPCAFFLNSRAAAGQFDSVFYIVQS IELIAGAANLTLLGLSMKDGFSIRKPKQKSAPLHV >gi|289656360|gb|ADEA01000007.1| GENE 68 78930 - 79379 552 149 aa, chain + ## HITS:1 COG:mll5152 KEGG:ns NR:ns ## COG: mll5152 COG1846 # Protein_GI_number: 13474295 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Mesorhizobium loti # 6 142 5 141 143 122 51.0 3e-28 MDEVFKTESAGYLMNHIARQFAILLGEGLKPLGIAPAQFPILLELWQKDGLSQQELVERA DLKQATIANTLARMERDGLITREPNPDDARSRLIMLTEQARALQQQSTEIAQAINQTALS DLSADEQNQFLEMAAKIVARQQEMIAGGK >gi|289656360|gb|ADEA01000007.1| GENE 69 79515 - 79961 711 148 aa, chain + ## HITS:1 COG:PM1611 KEGG:ns NR:ns ## COG: PM1611 COG0790 # Protein_GI_number: 15603476 # Func_class: R General function prediction only # Function: FOG: TPR repeat, SEL1 subfamily # Organism: Pasteurella multocida # 4 130 3 129 172 68 29.0 5e-12 MKSKLSALTISALLAACSAVPHHNEQAKALLDEGIALYQKQDYQHAMPYFEQAQQAGHMK APRYLGLMYLNGEGVAQNAQTAFAYFTQAAEAGDITGQYWLGYCYEHGVGTAKDMTQAVR WYQKSAARGDHVSQPAIDALNRLGVKTN >gi|289656360|gb|ADEA01000007.1| GENE 70 79992 - 80972 1365 326 aa, chain + ## HITS:1 COG:YPO0986 KEGG:ns NR:ns ## COG: YPO0986 COG4099 # Protein_GI_number: 16121290 # Func_class: R General function prediction only # Function: Predicted peptidase # Organism: Yersinia pestis # 60 324 181 458 458 179 35.0 7e-45 MKKTAAVIAAGLLLAACTATQNTAENSPAAQNAQNLAWDKQYGGADKSYDSRLLALREQI APRFEVLTFKDSQTGKEMQYNLYTPKNLEPDRKYPLVMFIADASTAGKGVKAPLMQGYGG IIWATDEAQAKHPAFVLVPSYTETAVNDQWQTSDEVGITLRLVKSLMTQKPIDPDRVYTT GQSMGGMISFYLNSIEPNFFAASMFVGSQWDINVLKPLTRAKFIYTVSAADQKASTGMAQ VGEMLQQNKVAYAETEFSAKLPQAEQDAKVQQMLAQGKRINFIRFTPNTVIPESSTHKGA EHMYSFDYAYLLEPVRDWLMQQKRGK >gi|289656360|gb|ADEA01000007.1| GENE 71 81128 - 81265 120 45 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MHPAITDTTDNIGGMVARHPSTRGLPLILPLNTPVVWNHHADFHL >gi|289656360|gb|ADEA01000007.1| GENE 72 81285 - 81983 859 232 aa, chain + ## HITS:1 COG:BH1302 KEGG:ns NR:ns ## COG: BH1302 COG0726 # Protein_GI_number: 15613865 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Bacillus halodurans # 26 232 27 233 239 194 46.0 2e-49 MKPKILLIGLALVIAAAIGLYLLMNARCYQLLGNLVCHGADERKRIALTFDDAPSERTSD AVLAVLAEKNVKATFFMIGENMERYPQAAQRIAAAGHEMGNHSYSHRRFLLRSPAFIARE IEDTNALIRTAGYHDPIHFRPPYGKKLLGLPWYLARHNITTVMWDSEPARHQAPTAEAIT AAALAQAHNGAIILLHPFCAEACRAEREALPLIIDGLRAQGYTLTTVSELLK >gi|289656360|gb|ADEA01000007.1| GENE 73 82101 - 82238 205 45 aa, chain + ## HITS:1 COG:no KEGG:NT05HA_1066 NR:ns ## KEGG: NT05HA_1066 # Name: not_defined # Def: NmrA family protein # Organism: A.aphrophilus # Pathway: not_defined # 1 36 1 36 286 72 91.0 6e-12 MNLAITGASGNIGGMVARHLSSHGLPLILPLRNPAKLRGAAVCLW >gi|289656360|gb|ADEA01000007.1| GENE 74 82270 - 82947 651 225 aa, chain + ## HITS:1 COG:slr0317 KEGG:ns NR:ns ## COG: slr0317 COG0702 # Protein_GI_number: 16331888 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate-sugar epimerases # Organism: Synechocystis # 16 214 81 275 287 82 31.0 8e-16 MDVLFMVSAAESPTREQEHLTLVQAALEAGVKHMVYLSFAQAALDSTFTLARTHAVTENA IRQTNMRYTFLRDNFYSEMMATIANAGGIIAGPADDGRVACVSQRDVAQAAANIIADIAC GYHRHDNQTYTLTGSQSLSFAEIAAVLTEITDKPHRYHNETMEEAFTSRKAAYPDTPDWQ IEAWVSTYTTIAKGELAAVSDDLPKLLEREPRRFVEVVKDIYDAA >gi|289656360|gb|ADEA01000007.1| GENE 75 82937 - 83788 239 283 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 24 243 28 259 563 96 28 7e-19 MQPEHTPLIEFKNVSKHYDNHTAVNELNLTIYQGEFFVLVGGSGSGKSTTLRMINALTEP TDGDVYFNGRRIKDYDIRGLRHRIGYVLQQIALFPTMTVRQNIELMPDILGWDKPKRTSR VNELLELVGMPPETYLNRYPHELSGGEQQRIGILRAIAAKPDILLMDEPFSALDPLARAS LQETVSLIHKKLGTTIVFVTHDMNEAAKLACRIGVMHQGRLVQVDTPQDIQNHPADDYVR SLFGTAQPENTASADEVINLYRRLDADGKARVREYWVQNRMDV >gi|289656360|gb|ADEA01000007.1| GENE 76 83992 - 85311 1577 439 aa, chain + ## HITS:1 COG:BS_yceI KEGG:ns NR:ns ## COG: BS_yceI COG0477 # Protein_GI_number: 16077364 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Bacillus subtilis # 18 435 11 400 400 316 46.0 6e-86 MDILSRLQALPPGRFHYKLLILVGIGWLFDAMDTGIVSFILPELGKEWGLQPAQLGWIVS IAFIGMALGAVSSGWLADRFGRKTVFAATMAVYSTATGLCAFAPDIATLLTCRFFVGVGL GGQLPVAVSLVSEYAPPKVRGRFIVLLESFWGLGWLAAALASYFFIPKFGWHSAFLIGTL PILYIPLVLKFIPESVPYLLSQGKTDEAHRLVSRLENEAGITPAATAVAPPQKEKQRIRF MQLWQQPFARRTLMLWLVWFGIVFSYYGIFTWLPKLLVEQGNTVVKTFEYVLVMIVAQLP GYIAAAALVEKIGRKATLAGFLAACAVCAWFFGQSGSAAEVMAWGSLMSFFNLGAWGVLY TYTPELYPLRFRAFASGWAGAIGRIGGILAPMVVAKMVGSSSGFGNIFMMFAGVMMLIVL VILALGEETKGRTLEEISS >gi|289656360|gb|ADEA01000007.1| GENE 77 85406 - 86074 614 222 aa, chain - ## HITS:1 COG:FN1124 KEGG:ns NR:ns ## COG: FN1124 COG2885 # Protein_GI_number: 19704459 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein and related peptidoglycan-associated (lipo)proteins # Organism: Fusobacterium nucleatum # 101 214 205 312 315 81 39.0 1e-15 MKTLRSLTCIAVISALCACGQKPDEPAAQQQQASPVQASTTETPQTQPEPVAPSAPAHAT TPAPASAPATAQNSSAAAQGSSLTAQSSSLSGTETGFNIQINLSSDVLFDFDKAELKPEA DRELQKAADIIRQKGKGLILISGYTDSKGTDAYNKRLSLVRAQAVKNWFEAQGLHQNYQT EGLGAANPVAPNTNDDGSDNPEGRAKNRRVEIIVNKTKQLGE >gi|289656360|gb|ADEA01000007.1| GENE 78 86143 - 86760 505 205 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298368929|ref|ZP_06980247.1| ## NR: gi|298368929|ref|ZP_06980247.1| phosphoribosylformylglycinamidine synthase 2 [Neisseria sp. oral taxon 014 str. F0314] # 1 205 1 205 205 283 100.0 6e-75 MRASLCTLAVLSALTMLTACQKEPEPAPVAPAQPQAQTQTQQEASKPNPAPPAAEAPAAS SPALVQEPAAPQQDPAAQAIESKPFGEGTLALTKAKVVGQILNVEFIFTPPKKPNGDYKF TNVHSGDLKDFAYIDETTSKRISLLQDESGKYMADPIGGAGLNIGLTGTTPKIIALKFPA PPETTPTITIDFPGAGSFDSVQVSR >gi|289656360|gb|ADEA01000007.1| GENE 79 87925 - 89910 2459 661 aa, chain + ## HITS:1 COG:PA4582 KEGG:ns NR:ns ## COG: PA4582 COG0330 # Protein_GI_number: 15599778 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Pseudomonas aeruginosa # 282 659 2 380 381 283 43.0 8e-76 MFKNFVVKPTERLIVLLDGSLHTVLNAGKHTIWHWGKEIETHKQDATVLHVQWNGIGSLL KIASERKKAEKFLQIVHNPAGHNTLVWHDEMPVFTMTDNTDYWAFFRPEKGELNTLTLAH NEYWLPENVQETLLLRNQVPSNCEKFVVEQHERLLIRINGRLQRVLGEGRYLLQSKARAK NNEIEIERQHTANAMYHQWEDAQKWAKEQPENPQWLVLESPVGQNTLAWHQDFGAKVVAS GEHAAFWLPENGEIETHTQPKTEYWLPENVQAALLAHATLDKPLQKYTVKANERLLITER NRLMRVLGEGDYVLLLGEEHKALFADTGIPVYENTAQLAQWAAQNPELAAAHWQRVEAGE NELLLWSQNDKLQNLIRPKEAAWFWREAAQPYEIQRIDLSQGLAIDADTVKQLQNINFGG HPVFKNAVHTVNVPEHHQGLVYIDNVQQPPLTQGRYHYWLVNQTVGSQVADLRLQTCEVS GQELLTEDKVTVRANVVCNYRITDAPKWFAQHQSPEEYLYRELQFAIRALIGSKSMDTLL ADKQGLDTELTALIRAKVPLGAEIDSAGVKDIILPGEIRSILTRVVEAEKSAQANNIRRR EETAATRSLLNTARVMEENPTALRLKELETLEKVTEKIDKISVYGGLDGVLKGLINIQQP K >gi|289656360|gb|ADEA01000007.1| GENE 80 90451 - 90567 178 38 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKVLDNAKLSSVSGGRFLVMPRVFYKPEWQKWLDILIG >gi|289656360|gb|ADEA01000007.1| GENE 81 91663 - 91737 86 24 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MYRNVIPKFQFGALLDYPNFTYYI >gi|289656360|gb|ADEA01000007.1| GENE 82 92129 - 92284 150 51 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKVLDTAKLSSVAGGGLFQLGPGNILMPIRFWFKTEEDWQRFLNLGNTMKR >gi|289656360|gb|ADEA01000007.1| GENE 83 92974 - 93270 297 98 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298368932|ref|ZP_06980250.1| ## NR: gi|298368932|ref|ZP_06980250.1| hypothetical protein HMPREF9016_00600 [Neisseria sp. oral taxon 014 str. F0314] # 1 98 1 98 98 162 100.0 9e-39 MNIEYLLDILKNRGYISIQDDRNLHGRASSDHLLSELRKNDKSGMELKKYGMYRPTELVD IYWIQNDTHEDIHDGVLDMKNIMEDIYLEELHKLQQDM >gi|289656360|gb|ADEA01000007.1| GENE 84 93559 - 93954 259 131 aa, chain - ## HITS:1 COG:mlr5326 KEGG:ns NR:ns ## COG: mlr5326 COG3544 # Protein_GI_number: 13474444 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mesorhizobium loti # 16 123 24 130 130 84 49.0 5e-17 MKKLMTFITLSAVAVSIYAQANEQPHQAHMNMPMSTGSAMQQELMQGMNQMHQDMMAAAQ YKDPDVAFAAGMLPHHIGAVKMAEVELKYGKDPEMRKLAENIINAQQAEIEQMQKWLKAH NKKASRSLHPR >gi|289656360|gb|ADEA01000007.1| GENE 85 94194 - 96221 3342 675 aa, chain - ## HITS:1 COG:NMB1331 KEGG:ns NR:ns ## COG: NMB1331 COG0556 # Protein_GI_number: 15677197 # Func_class: L Replication, recombination and repair # Function: Helicase subunit of the DNA excision repair complex # Organism: Neisseria meningitidis MC58 # 1 675 1 675 675 1285 98.0 0 MEVIQYPNSPFKLHQPFPPAGDQPTAIAGLLEGLSDGLAYQTLLGVTGSGKTYTMANVIA QSGRPAIIMAHNKTLAAQLYAEMREFFPENAVEYFVSYYDYYQPEAYVPSRDLFIEKDSA INEHIEQMRLSATKNLMTRDDVIIVATVSAIYGIGDPTEYQQMVLSVKEGDTIEQRDIIA TLVSMQYERGDLDFKRGSFRVRGDVIDVYPAESSENALRISLFDDEIDRLDMFDPLSGSL HQRVGRYTVFPSSHYVTPRDTVLRACESIKEELRERIEFFAREQRPVEQQRIEQRTRFDL EMLYEMGFCKGIENYSRHFSGKKEGEPPPTLMDYLPDNAIMFIDESHVTVTQIGGMYKGD ASRKQNLVDYGFRLPSARDNRPLKFHEFEKVMPQTVFVSATPAKYEEEHAGQVVEQVVRP TGLVDPQIIIRPVATQVDDLMSEINDRIQKGERVLVTTLTKRMAEQLTDYYSELGIKVRY LHSDIDTVERVEIIRDLRLGLFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSHRSL IQTIGRAARNVNGVAILYADKITDSMKAAIDETERRREKQMKFNEEHGIVPQQIKKQVKD IIDGVYHEEDGGKGRLKGKNKVKVGEIHNEEDAIKEIAKLEKAMQQAARDLQFEEAAVLR DRIRGIKEGLLFGAE >gi|289656360|gb|ADEA01000007.1| GENE 86 96384 - 96722 481 112 aa, chain + ## HITS:1 COG:no KEGG:NMCC_0844 NR:ns ## KEGG: NMCC_0844 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_053442 # Pathway: not_defined # 1 112 1 110 110 148 66.0 5e-35 MQILPFQPEIAERMLAGTDGETIHRDSAFVQTANGYWLAWHDGIAALLAPDNPPDTPCFW VEGAQNLAELVALVENGGFDEVEEFDGDDDSWHEAAAGCSGHGHDGHCGCGH >gi|289656360|gb|ADEA01000007.1| GENE 87 96722 - 97048 421 108 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298368936|ref|ZP_06980254.1| ## NR: gi|298368936|ref|ZP_06980254.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 108 23 130 130 130 100.0 3e-29 MKLKNLTPLAACLILSGCVVGAAVDLAATTVVTAGKLAVKGTGAVINAAIPDGDDKKKKD KKKQEKAQQPETQQAPPPPYAPAQTAPAHTRYITVDADGNVVEERDAP >gi|289656360|gb|ADEA01000007.1| GENE 88 97194 - 98600 2106 468 aa, chain + ## HITS:1 COG:NMA1105 KEGG:ns NR:ns ## COG: NMA1105 COG0305 # Protein_GI_number: 15794052 # Func_class: L Replication, recombination and repair # Function: Replicative DNA helicase # Organism: Neisseria meningitidis Z2491 # 1 468 1 468 468 802 90.0 0 MTDYNDMPSEDREVSALSLPPHSMEAEQSVLGGLLLENAAWDRIADIVNGEDFYRHEHRL IFRVIATLINESRPADVITVQEALERNEELEAAGGFNYLISLAQNTPSAANIRRYAEIVR ERSIMRQLAEVGTEIARSAYNPQGRDAGQLLDEAENKVFQIAESTAKSKQGFLEMPALLR EVVERIDMLYSRDNPDEVTGIATGFIDLDKKTSGLQPGDLIIVAGRPSMGKTAFSINIAE YVAVESKLPVAVFSMEMGGAQLVMRMLGSVGRLDQHVLKTGRLQDEHWGRLNEAVVKLSD APMFIDETPGLTALELRARARRLARQFGGKLGLIVIDYLQLMAGSGRSDNRASELGEISR SLKALAKELQVPVIALSQLSRTVEQRTDKRPMMSDLRESGAIEQDADLIMFMYRDEYYNA ETQFKGLAECIIGKHRNGPTGKVFLTFFGQFTKFENAAYVPEAAMMED >gi|289656360|gb|ADEA01000007.1| GENE 89 98750 - 99418 793 222 aa, chain + ## HITS:1 COG:NMB0886 KEGG:ns NR:ns ## COG: NMB0886 COG4970 # Protein_GI_number: 15676782 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein FimT # Organism: Neisseria meningitidis MC58 # 4 217 5 221 222 227 52.0 2e-59 MYSKQKGFTLIELLVVIAIAAIMATIAFPNLSQWIASRRATSQAEQIANLLRFARSEAVR LNLPVYVCPVQIKSDGKSNGDCKSAYSGQGMLAFADKNNDKKYTNDTTDISLRTIILNGN QQSGQVEHSFKNISAQGKESKGNQFWVFFPNGMFAHSDSLSNINSSSVADGSVKIALTDA AAKDIATKRARASVVLIDNSGRVEICARPDSREICKYPDSNK >gi|289656360|gb|ADEA01000007.1| GENE 90 99443 - 100111 638 222 aa, chain + ## HITS:1 COG:NMB0887 KEGG:ns NR:ns ## COG: NMB0887 COG4967 # Protein_GI_number: 15676783 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein PilV # Organism: Neisseria meningitidis MC58 # 16 220 10 201 204 147 45.0 2e-35 MNNKTSYKYPFTGKGRLKTKQSGMTLIEVLVAMFVLALGVLALLAVQLRAVSGVREAESQ TIVSQIAQNLIEGMVINPTLSSDSATGWTKKSYTDYIMESPSSAKNYVDNKGKPCPSSLP SNGIDSEQLTKNQICQFKNSIRNTLGENTDLQFIICLDSKGTVPTLKDGKFDGNCDKQGN VTYIKAAWSEDAETASDDKSSNGLTKDGNKIVYTFQAQIADN >gi|289656360|gb|ADEA01000007.1| GENE 91 100114 - 100995 223 293 aa, chain + ## HITS:1 COG:NMA1108 KEGG:ns NR:ns ## COG: NMA1108 COG4966 # Protein_GI_number: 15794055 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein PilW # Organism: Neisseria meningitidis Z2491 # 16 293 15 332 332 217 43.0 2e-56 MQKNKKHLSLYSYRSGIKGFSLIEFLVAAALSMIVLMAVSSTYFTARNLNNTATSRLTVQ QDLRNASNMIVRDARMAGSFGCFNMSAHKAGDVKTDDSNQNSIFKLATAANSALVPVSTE TLKISGFTTQNKALIFKYGAVEDTPTAPIVISSCSAIKRDDTAKTNQAAANSLNANAQIG SVSVLKYVVNAYVVGTPTNGQSGLYRFQYDGKTWGNPQLLVRGISTMNMNFIYNTDDSCK TFDKTDTIKTDKAPALIQLTFNDSINAGNDNNIQIYNIDAAVRGGNQCADRTL >gi|289656360|gb|ADEA01000007.1| GENE 92 100974 - 101534 563 186 aa, chain + ## HITS:1 COG:NMA1109 KEGG:ns NR:ns ## COG: NMA1109 COG4726 # Protein_GI_number: 15794056 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein PilX # Organism: Neisseria meningitidis Z2491 # 1 185 1 194 197 157 54.0 1e-38 MRRPHTLIQSKSNQQGFALFIVLMMMVAIALLVVAAMQSYNTEQRISTNDADRKLAFSLA ESALREGENAILNLPDSVTFNDNCDNGLCRAANTAEKTGSIKITGTSNVEAWLRKCGDKL CIDDKGKKYPKDAKVSLPNGVSKNPRYIIEYVSNSSTGANIYRVTAKAWGKNDNTTVMVQ SYVSNE >gi|289656360|gb|ADEA01000007.1| GENE 93 101544 - 102017 363 157 aa, chain + ## HITS:1 COG:NMB0890 KEGG:ns NR:ns ## COG: NMB0890 COG4969 # Protein_GI_number: 15676786 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, major pilin PilA # Organism: Neisseria meningitidis MC58 # 9 150 10 155 162 120 45.0 7e-28 MVKASRFYGFTLVEMLITVAIIGILATIAMPSYNRYIERGYLSQAYADLVSINSNVRTYI VKNPGTKIDSDKLKNIISKSTTAEIAERYDFAGSVPDDKSRRYLLSATPKADTGYTQALW TDSLGEAYKCTDAASAKAFSTSQTDGKGCERIGKTGI >gi|289656360|gb|ADEA01000007.1| GENE 94 102123 - 103559 1159 478 aa, chain - ## HITS:1 COG:NMB1327 KEGG:ns NR:ns ## COG: NMB1327 COG0790 # Protein_GI_number: 15677193 # Func_class: R General function prediction only # Function: FOG: TPR repeat, SEL1 subfamily # Organism: Neisseria meningitidis MC58 # 10 466 8 464 467 357 47.0 4e-98 MENTQSVSFFERARQFLNQTPPDYAVAVPLLRQAVQEGDTEAAFQLSGCLMNGLGVRKNA EEGIALLEQAASAGHPYARYNLLQLKEAGGTPVALLLGIYGDLAEQGMVQAQMRLLKYFN ETGKTDKALYWAKKAAAANHPQAQYYLAQYYQNAAEPDMEAAYRLYRQAAEQGLVAAHWQ LGLQYLYGQGVPQNHEQAAHYLRIAAEQGIAAAQTALAEILLPENNKEALVWFQTASEQG DNNAHAALAELYLLGRYVERNPEAARSHAEAAAQFRHPEALRLLGDIYSYGLGVDADSDT ARGYYRQAAEAGSMAAYQKLVSDSALHDRQNYERIKETALQHQKLEQLYQQAFASYHGLN QMQDYSEAFEFYLQAAKLGHRRAQTDLGMMYYSGKGVEEDTAQAAYWFGCAAESNDATAQ YSLACLYFNGEGIERNIAKACALLEAAICNGHPHKDALIPLLNQWREMMSSLERPSEK >gi|289656360|gb|ADEA01000007.1| GENE 95 103726 - 106188 1135 820 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15894003|ref|NP_347352.1| fused ribonuclease/ribosomal protein S1 [Clostridium acetobutylicum ATCC 824] # 44 725 13 702 730 441 37 1e-123 MSILKMKKNIKLLNLREKDPYLEREGQRYDHPLPSREWIIKLLEQKGVPAKMEALARELS ITDAEYEFFERRLKAMARDGQVLINRRGAVCVANKIDLVKCRVEAHKDGFGFAVPLQPTG DGDFILYERQMRGVMHGDIVTVRPAGVDRRGRREGTVLDIVERAQKQVVGRFYVERGIAI LEAEDKRLTQSIVLEPDSVAGFKPESGQVVVAEIETYPELNRPAVAKIIEVLGDYADSGM EIEIAVRKHHLPHQFSGACRKAAEKIPDHVRKSDLKGRVDLRNLPLVTIDGETARDFDDA VFAEKIGRNYRLVVAIADVSHYVRPNDAIDNDALERATSVYFPRRVIPMLPENLSNGICS LNPDVERLCMVCDMMVTYAGNIKEYKFYPAVMRSHARLTYNQVWSWLSDGLEHPYKEQID TLYRLFKILQKKRSSRGAVEFESVETQMVFDGNGKIEKIVPVVRNDAHKLIEECMLAANV CAAEFLLKNKHTALFRNHLGPTPEKLATLREQLALTGLSLGGRDNPTPKDYAVLAEQFKG RPDAELLQVMMLRSMQQAVYEPNCDGHFGLAYDAYAHFTSPIRRYPDLTVHRAIKAVLAG EKYNPGKSWQELGVHTSFCERRADDASRDVENWLKTYYMRDKVGEVFGGKISGMTSFGIF VTLDDIHIDGLVHISDLGEDYFNYRPEIMAIEGERSGVRFSMGDRVSVKVARADLDTSKI DLLLISGGTAGKKRGKKAVSASKSPSELAAKKGAVKAARGRKSRVGIKEADTLTKETGKS DLRKKSASGKAKTGKKRKSVKVVVGSRSKAKGKPKAGGKS >gi|289656360|gb|ADEA01000007.1| GENE 96 106930 - 107403 762 157 aa, chain + ## HITS:1 COG:NMA1577 KEGG:ns NR:ns ## COG: NMA1577 COG2846 # Protein_GI_number: 15794470 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Regulator of cell morphogenesis and NO signaling # Organism: Neisseria meningitidis Z2491 # 1 157 1 157 157 263 85.0 1e-70 MTDFTVWETAPFGATIDHILQRYHNVHRAQFEELVPLAQKVAEVHADSFPAEVPELLAYM QNELLMHMMKEERMLFPMIKQGVGRGAAMPISVMMHEHEEHDQAVARLLELTGNLTVPEN ACGSWTRLYTLARELVDDLTDHIHLENEILFPRVLAS >gi|289656360|gb|ADEA01000007.1| GENE 97 107447 - 108415 1152 322 aa, chain - ## HITS:1 COG:NMA1207 KEGG:ns NR:ns ## COG: NMA1207 COG0042 # Protein_GI_number: 15794151 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-dihydrouridine synthase # Organism: Neisseria meningitidis Z2491 # 2 320 14 332 333 569 82.0 1e-162 MKLVLAPMQGLVDDVMRDLLTRIGGFDECVSEFVRITHTVHSRQTWLKYVPEIANGNKTF AGTPCTVQLLGSDADNMAVNALEAVRFGADKIDLNFGCPAPTVNKHKGGAVLLKEPELIY RIVRTLRRRLPPHIPLTAKMRLGYEDKSPALECAAAIAAAGACALTVHARTKNEGYEPPA HWEWIRKIRDSVDIPVTANGDVFTLEDYLEIKAVSGCDSVMLGRGAVIRPYLARQIKQYE DGREARDADFAEISGWINLFFDLCTMKEANGKYPVARLKQWLGMMKKEFAEAQELFDAVR AVRDAGEVKRILSAFEEKMSAG >gi|289656360|gb|ADEA01000007.1| GENE 98 108508 - 109461 1030 317 aa, chain + ## HITS:1 COG:mll3190 KEGG:ns NR:ns ## COG: mll3190 COG1957 # Protein_GI_number: 13472783 # Func_class: F Nucleotide transport and metabolism # Function: Inosine-uridine nucleoside N-ribohydrolase # Organism: Mesorhizobium loti # 6 316 6 313 313 337 54.0 2e-92 MDGKIRLIIDTDPGQDDAAAILMAHGLAKRGLIDFMALTAVAGNVGLNHTSANARIICDW AGRKDFPVYAGAGKPLLRDLVTAEEVHGKTGLDGVALHDPECPLQSVHAVDYLIRALRGA ERGSITLCPIGPLTNIALAFSLAPDIADAVKNIVLMGGCYFEAGNITPCAEFNFYVDPHA AQIVLQSGAPITILPLDVTHKAQITTPRMDMLRRLGNVNGPRLADILQSYERYDIQAFGL EGGPLHDPCAVAFAVFPELFRGKACRVDVDTQSELSLGACSVDWRGTTGKPANAFWVTEV DSDGLFRELAESVSFLP >gi|289656360|gb|ADEA01000007.1| GENE 99 109561 - 111114 2261 517 aa, chain + ## HITS:1 COG:Cj1135 KEGG:ns NR:ns ## COG: Cj1135 COG0463 # Protein_GI_number: 15792460 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Campylobacter jejuni # 8 501 7 507 515 421 44.0 1e-117 MTSKIPATATMLVKNSERYLSEVLTALDGFDEILLLDNGSTDRTLEIAAGFKNTSIRKHE FIGFGPMKNLAARLARNDWIFNIDSDEVADTELMESIRAAVAENRMQKVFSLSRLNHYDG RLIKACGWYPDIIPRLYHRRFTQFSDRQVHESLKLPENTETQILAGRLKHYSFENAEGLI RKMQQYSTLYAEENRYKKPASPAKALLHGGVSFVKNYFLKRGFAYGSDGLIISAANAQGS YYKYVKLYERNRHITAALVITTYNRPDALELVLKSALAQTRLPDEIIVADDGSAQDTAEV VDAFKRISPVPVKHSWRPDDGFRAAESRNRAIAAASSDYIILIDGDMLLDPSFIADHLKL ARKGRLIQGSRVILTEERTAALLENSSLPALSCFSTGIRKRTSALRLRLPAKIVGSHGNR KHKGIKTCNMGFFRDDALAVNGFNNEFVGWGREDSEFVARCYHAGMKRHNLKFAGVAYHL WHHEAERDSLPQNDALLQQTLFEGKIRCEDGIDAFLK >gi|289656360|gb|ADEA01000007.1| GENE 100 111185 - 112510 1706 441 aa, chain + ## HITS:1 COG:PM1677 KEGG:ns NR:ns ## COG: PM1677 COG1253 # Protein_GI_number: 15603542 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Pasteurella multocida # 1 427 16 444 449 515 64.0 1e-146 MNILEALLLLILLIVISAFVSCSELALASARKIKLQVMAKDGGDTRALDVLNMQQQPGSF ITVVQIGLNAVAILAGIVGEAAVRPYFGGLLANAGSWGSTAASLLTFALVTGSFILIADL MPKRVAMTHPEAVAVRIVRPMMFLIFILKPFVWTFDGLANTIFKLFKISTVRQEQLTSED IYAVVDAGAQAGVLKQQEHYLIENIFDMQARTVTSTMSTREYIAYFDKNDGSDTVLEIMS EKPHNKFLVCDGDLERVIGYIESHTLLTLFLKEKDVRLTDKRVLRKALFIPDTLSLYDVL ETFKTSGEDFAVVVNEYALVVGVVTLKDVMSIVMGELVNTEEEPQIIRRTEDTWLVDGAT PLADVMRALDIEEFPNSENYETIAGFMMYSLRKIPKRTDFLVYAGYKFEIIDTENLKIDQ LLVTRQDNGSRTDGSGLPARA >gi|289656360|gb|ADEA01000007.1| GENE 101 112589 - 114082 2056 497 aa, chain - ## HITS:1 COG:YPO2188 KEGG:ns NR:ns ## COG: YPO2188 COG1502 # Protein_GI_number: 16122418 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes # Organism: Yersinia pestis # 2 497 3 486 486 353 38.0 6e-97 MTFLKNITWAEIFLFAHTCAALTCMVRVLYKQRNVGTAFAWLIILFLFPVFGTIGYLLVG EPWLGSARTKRMGEMNRFYSGFAEKYLKEMYFDVGDKVKPHYHGISRVAARSTGLGATQG NGMTLLATTDDIIDTMLADIEAAEHSCLLAFYIIEPQGRIEELLDAVLRAAGRGVDCAIL ADAVGSSGFLGSAWAEELRDAGVEVHSALPVGPLRTLFTRSDLRNHRKIMVIDGKIGYTG SYNLVDPRFFKKGSGVGEWVDVMMRCTGPLVLEMSAVFFADLAVETDENLQGIQQYLTEH EDRIPELLPENINRGSVVAQVIPSAPEQGDRVIYETIISAIHSATKRIIITTPYFVPDEP LLTALTTAAKRGVEVTLILPAKVDSLLVRYASRAYYPLLLSAGVKLAMFEGGLLHAKTMT IDEDYALFGTVNMDMRSFFLNLEISLAIYDKHMTNRIYDLQRGYLADSRYISVRAWQQRA KWWGLVENTVRLMSPLL >gi|289656360|gb|ADEA01000007.1| GENE 102 114187 - 114522 665 111 aa, chain - ## HITS:1 COG:no KEGG:NMB2152 NR:ns ## KEGG: NMB2152 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis # Pathway: not_defined # 8 105 2 99 105 94 48.0 8e-19 MIDIEEAQRRIDEIQSLYREWLRLLPELEAAQDEWRKAAEIVRKLDGFYSGEYNRYYTEI ENGLPVSLETEGEYSIMSQDALYDAFGDHYRLSWEWMRLAVASLDPDKRSG >gi|289656360|gb|ADEA01000007.1| GENE 103 114642 - 115823 1697 393 aa, chain + ## HITS:1 COG:NMB1371 KEGG:ns NR:ns ## COG: NMB1371 COG4992 # Protein_GI_number: 15677236 # Func_class: E Amino acid transport and metabolism # Function: Ornithine/acetylornithine aminotransferase # Organism: Neisseria meningitidis MC58 # 1 392 1 392 398 676 83.0 0 MQNYLTPNFSFAPMIPERALGSRVWDTEGREYIDLSGGIAVNALGHCHPDLIAALAEQSQ KLWHISNIYTTKPAQELAQKLVEHTFADKVFFCNSGAEANEAALKLARKYGRDHFGGHKT EIISCLNSFHGRTLFTVSVGGQPKYSKDYAPLPPGITHVPFNDIAALEAAISENTCAVII EPIQGESGILPATQEYLQAARRLCDEHGALLILDEVQTGMGHTGKLFAYEHYGITPDILS SAKALGGGFPIGAILTTDKIAPTFGPGTHGSTFGGNPMACAVGSRAFDIINAPETLAHVE KQGQKLQTALRELGEKTGAFKEVRGMGLLIGCVLTDKYQGRASEITAAALKHGLMILVAG ANVVRFAPSLLLNDKDMGEGLKRLEAALKEWAD >gi|289656360|gb|ADEA01000007.1| GENE 104 115944 - 117956 2909 670 aa, chain + ## HITS:1 COG:NMA1660 KEGG:ns NR:ns ## COG: NMA1660 COG0210 # Protein_GI_number: 15794554 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Neisseria meningitidis Z2491 # 1 670 2 668 671 1234 91.0 0 MKLNPQQQAAVKYLGGPLLVLAGAGSGKTGVITQKIKHLIVNVGYLPHTVAAITFTNKAA TEMQERVAKMLPKSQTRGLTICTFHSLGMKILREEANHIGYKKNFSILDSTDSAKIIGEL LGSTGKEALFKAQHQISLWKNDLKTPEDVLQTASNAWEEQIARAYASYQETLQSYQAVDF DDLIRLPAVLLQQNSEVRNKWQRRLRYLLVDECQDTNTCQFTLMKLLTGAEGMFTAVGDD DQSIYAWRGANMENLRKMQEDYPQMKVIKLEQNYRSTARILKIANKVIENNPKLFTKKLW SQFGEGEIVKVVACQNEQHEADWVVSQIVKQKLVGGDKTQYADFAVLYRGNHQARIFEEA LRSARVPYQLSGGQSFFDKAEIKDVLSYLRLLANPNDDPAFLRAVTTPKRGIGDVTLGKL NTYAHEHECSLYEAAQTEEALALLNNTNRQHLQAFMDMFGSYRAKAETSEAGELINGLLK EIDYENHLLASEEGKAGEIKWRNVSDLTGWLERKGEQDGKNIIELAQTVALMTLLEGKSE EEVDAVKLSTLHASKGLEYPYVFLVGCEEGILPHNDSIEEDNVEEERRLMYVGITRAKRQ LTLTHCVKRKKQGTWQFPEPSRFIDEMPQEDIKILGRKGGEPIVSKEEGRNNLAGLLDML GGKSGQKQPG >gi|289656360|gb|ADEA01000007.1| GENE 105 118112 - 119677 2537 521 aa, chain + ## HITS:1 COG:NMB1345 KEGG:ns NR:ns ## COG: NMB1345 COG5339 # Protein_GI_number: 15677211 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 5 518 1 513 516 678 65.0 0 MTKSLTKFLIPAIAVFIAGMSAAPYYLGIKTEESLAEQQKLLKESGFLTVESHTYERGWF SATETTVIRLKPTLLQNTEKFLPDNLKTVLQEPVTIVNHIEHGPFAGGFTPVRAHIETEF KYHPETTKVLARFFGSQTPLSMTNTVYLNGSGEMDVKVPAFDYEELSGIKLNWKGLSGKT GYQAGFQSYTHDYTAPSLQVKLADKGSVGLENLHLQTETSDGQNKLSLGKSSVTLDKFLL EWKEGIDYNVKLNELINLVTDLQIGAFINPTGTIAPSTIEVGKLRFDTQTTESGKFINSE GRFQFDTLTYGNDKYGPLDINIAAEHLDAQGLLALKAKLAEVADKKMDDEQIQNELIQTA KTKASSLFTQNPVLNVKAFKFTMPQGLVDVSGKLAFKGLTAKDMDNLGDMLKKTDADFNL QVPQKLIEDLAVNQARNIFSVNSEDEAAGRTSIDDINETLRLMVDSTIKSMAAEEYLTVK EGNLKTHITLQNSALKLNGKVLENEPEPDFDEGDMMSDAAH >gi|289656360|gb|ADEA01000007.1| GENE 106 119767 - 119907 77 46 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298368955|ref|ZP_06980273.1| ## NR: gi|298368955|ref|ZP_06980273.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 39 21 59 66 64 97.0 2e-09 MSEENKIKVNDLPDEKTQEEVELPVINEDNNRGGHSEGGCCGACGG >gi|289656360|gb|ADEA01000007.1| GENE 107 119997 - 120839 970 280 aa, chain - ## HITS:1 COG:NMB1283 KEGG:ns NR:ns ## COG: NMB1283 COG2877 # Protein_GI_number: 15677150 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase # Organism: Neisseria meningitidis MC58 # 1 280 1 280 280 476 80.0 1e-134 MDIQINNITVGNDKPFVLFGGVNVLEDLDSTLKACEQYVKVTDKLGIPYVFKASFDKANR SSVHSFRGVGLEEGMKIFQAVKKEFDVPVITDVHEPYQCRPVADVCDVIQLPAFLARQTD LVVAMAKTGNVINIKKPQFLSPSQMKNIVEKFKEAGNDKLILCERGSNFGYDNLVVDMLG FGVMKKTCDGVPVIFDVTHSLQTRESGSAASGGRRSQALELALAGMATRLAGLFLESHAN PDQAKCDGPSALPLSQLEDFLVRVKAVDETVKSFAPLEIK >gi|289656360|gb|ADEA01000007.1| GENE 108 120929 - 121312 570 127 aa, chain - ## HITS:1 COG:NMB1282 KEGG:ns NR:ns ## COG: NMB1282 COG0853 # Protein_GI_number: 15677149 # Func_class: H Coenzyme transport and metabolism # Function: Aspartate 1-decarboxylase # Organism: Neisseria meningitidis MC58 # 1 127 1 127 127 228 91.0 2e-60 MFRTLLGGKIHRATVTEADLNYVGSITIDEDLLDAAGICVNEKVAIVNNNNGERFETYTI AGKRGSGVVCLNGAAARLVQKGDIVIIMSYVMLSEPEIQTHQPKVVLVDGENKIRDIISY EPPHTVL >gi|289656360|gb|ADEA01000007.1| GENE 109 121470 - 121796 508 108 aa, chain - ## HITS:1 COG:RP177 KEGG:ns NR:ns ## COG: RP177 COG1324 # Protein_GI_number: 15604052 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in tolerance to divalent cations # Organism: Rickettsia prowazekii # 8 103 51 146 149 84 40.0 6e-17 MPAFKPVIVTTTAPTREEAEKIGGLLLEKHLAACVQYETITSQYLWNGEICRDDEIRITI KTSRHCYREIQKTIIANHSYDCPQILMQNVSRGFVPYLRWLKQCLGLK >gi|289656360|gb|ADEA01000007.1| GENE 110 121807 - 122088 507 93 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298368959|ref|ZP_06980277.1| ## NR: gi|298368959|ref|ZP_06980277.1| TonB protein [Neisseria sp. oral taxon 014 str. F0314] # 1 93 28 120 120 131 100.0 1e-29 MTIRAIILALLLALTLPAAAQNDNSVKQASAPENSVKLAVIVSPEGEAKEINIIESGGYS KFDKAAVAAAQKGNYNATGRWMKYLATVEFKPQ >gi|289656360|gb|ADEA01000007.1| GENE 111 122219 - 122887 1190 222 aa, chain - ## HITS:1 COG:NMB1075 KEGG:ns NR:ns ## COG: NMB1075 COG0560 # Protein_GI_number: 15676959 # Func_class: E Amino acid transport and metabolism # Function: Phosphoserine phosphatase # Organism: Neisseria meningitidis MC58 # 1 222 1 222 222 447 95.0 1e-126 MKNLAIFDLDNTLINTDSDHSWPQYLIKKGLVDAAETEAQNEKFYRDYQNGCLDIDAFLK FHLAPLARYSKEELAEFHREFMAEFITPHISPMQRMLVQSHQMAGDETLVISSTNEFIIT PICHLFGITNIIGTQLETGADGRYTGNYIGTPSLKEGKITRLNQWLAERGETLESYGKTY FYSDSKNDLPLLRLVNEPVAVNPDAELEQEAKAKGWPILNFK >gi|289656360|gb|ADEA01000007.1| GENE 112 122884 - 123552 752 222 aa, chain - ## HITS:1 COG:NMA1279 KEGG:ns NR:ns ## COG: NMA1279 COG0593 # Protein_GI_number: 15794209 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication initiation # Organism: Neisseria meningitidis Z2491 # 1 222 22 243 243 392 86.0 1e-109 MNQLIFDFATRDYPGFDKFLGTSNAELVYVLQNRHGQFIYVWGEQGAGKSHLLQAWVAQA LGMGKNAVYIDAATSPLTESVLEADYLAIDQIEKLGNEEQALLFAVFNRFRNSGKGFLLL SSEHTPQQLVIREDLRTRMAYCLVYEVKPLTDQEKIDALVSMAAARQVTIDLEIFEYLLN HWRRDMDSLMQMLDTLDNYAVTMGKRITLPLLRQLLKQQETQ >gi|289656360|gb|ADEA01000007.1| GENE 113 123995 - 124282 384 95 aa, chain + ## HITS:1 COG:NMA1375 KEGG:ns NR:ns ## COG: NMA1375 COG1396 # Protein_GI_number: 15794296 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Neisseria meningitidis Z2491 # 1 94 2 95 106 142 77.0 1e-34 MSSKLTLPDTLPDEHDLRAVLAYNMRVFRVGKGWSQEELARQCGLDRTYISAVERKRWNV ALSNIEKIAIALQIAPYQLLLPPQQLLRQMSEPAV >gi|289656360|gb|ADEA01000007.1| GENE 114 124301 - 126868 1366 855 aa, chain + ## HITS:1 COG:NMB1203 KEGG:ns NR:ns ## COG: NMB1203 COG2844 # Protein_GI_number: 15677076 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: UTP:GlnB (protein PII) uridylyltransferase # Organism: Neisseria meningitidis MC58 # 4 854 3 852 852 1207 68.0 0 MVSAKIRHILENFSNQRQKTVTRYQEKNNPVVFFKEYGNAVETLLTELWLEIFDTDRLCL LATGGFGRKELYPYSDIDLAIVAPDTISESEQEKIAGFIQTLWDIKLMPSVKSGSCDELC ASIREDISGDTAFLEARFLCGNRKLAEETFTRVDKQRDIAAFVEAKLVEMQQRHSKSQGS GAALEPNIKSCPGGLRDIHTMLWIAKAQELDTKISSLIRQNVLTCAEAATLAHSYKTLAA IRIALHINAKRAEDKLVFDLQDQVAEHIVRHDDTPQKRSEKLMRIFYHATKSVKQLNGIL LPMLQNRIHPKPKHVTHPINDDYYQINNQVAAKDIRIFYNQPVQIFKIIQILQRRNDITS IEPQTLRAWWSATRNIRPDFYNNPDNRRQFISFFQHGEGLTHIMRFLNLYGVLGRYLPAW EKITGLLQHDLFHIYPVDDHILTVLHNIRRFAIEARSHENPFASSLMQSFPQQHILYLAA IFHDIAKGRGGNHSLQGVADARKFAADHFLSQEESDLLAWLVENHLLMSTVAQKEDIQDP DVISNFCSRIGTQKRLTALYLLTIADIRGTNPKLWNNWRASLLETLFHTAARNLNGGASS LNAVFSRRQHEAADLLSRTGTPEAQQKKLWHVLGSAYFVRHQTREILWHTANLVHGIETP LIRSRILPESDTFQVMIFMPNGPRLFARLCRIFSRHSFDILAARAFITEHNYILDTFIVQ IPSCHHPSDYPNIQSALEAELNSFIHGYTVATEPPAPNHRLSRRGRYMPITPSVTITRDE DYSDWYTVEITAVNRTFLLADLAEVFFAKNVSLRYAKIATMGERVEDNFIIYSPDLENPR NQSALKQALLEQLNV >gi|289656360|gb|ADEA01000007.1| GENE 115 126959 - 128188 1243 409 aa, chain - ## HITS:1 COG:STM2692 KEGG:ns NR:ns ## COG: STM2692 COG0845 # Protein_GI_number: 16766006 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Salmonella typhimurium LT2 # 22 409 6 387 387 303 42.0 4e-82 MSSENNVKSKDLHLINDLNAALQKEKHSGQFWVIILFFIFLVVFVIWAYNSPIEEVTRGQ GNVIPSSREQVVQSLDPGIITEILVKEGDIVEKGQVLLKLDDTRSSAVLRESEAKVQNLE AMIARLKAEAYGKELSFPKNVSNELRQREHAAYVARRRAVTDAVSSLTASKAALDKEIEI TAPMVAQGVVSEVELLRMRRQSSELTLQITERRNRYMADANNELVQAESELAQAKENMAM RADPVDRSQIRAPMRGIVKDIQINTVGGVVNVGQDIMQIVPLDDKLLVEAYIRPQDVAFI RPGLPAVVKVSAYDYSIYGGLNGKVTLISPDTVSNSMQNRANDLKLDPNQVYYRILVQTT SNSLKDKNGKEMPIIPGMVATVDVKTGEKTVFQYLIKPITRMKQALSER >gi|289656360|gb|ADEA01000007.1| GENE 116 128261 - 130468 202 735 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 460 692 118 346 398 82 28 1e-14 MKAIIEHVALVTRLLGAPVSEAALSAEVVRDKKLNVNYHSLTEVLRSHGFENTLSKRSLE DIPSLAVPVLAILHNEEAAVITKIEGAGKDRKYHIRQVDGLEQELDHAQLSVLYLGYCWF IKPKMVSDNRSELPEYHLPKAWFWKVIWRFRGYYYQVILATIIINFLALVSSLYVMNVYD RVIPNQAYETLWVLSIGVVLAILFEFAAKMIRGHLTDIAGKKADLIISSALFRRVMALRL ADRPASSGSYANNLREFESVRDFMTSASLLTLVDLPFLLLFITVIGIVGGKLALVPLIII PIVVIVGLLVQRPLSRYINESMKESSQRSGLAVEAIEGIETLKTNNATSWAQQRWDEYTA KTSASSIKVKDTSNLMVNFAVAMQQLNTVFLVLVGTYLIHAENTAERITMGALIASVILS GRALAPLAQIAGLATRFQQAKLALQGVNDIVSRPIERSPERKYITLDNVQGAITFENVSF KYQQDSSSAVSDLRITIRPGEKVGILGRIGSGKSTMLKLASGLYDTEKGNVTLDGVDMRQ LDPNFLRNQVVLLSQAPRLFLGTLRENMDLARTDGYSTDQDLLVALKRFGLDKIIRNHPR GLDMPLGEDGLGLSGGQKQIIALARMTLRDPRVVLLDEPTTSLDQATERIALNAIAQWGR DRTMLLVTHRPQVLQIVNRIIVMDNGKVVMDGPRDLVLQNLMQSEQQNRAKQQANHPAVQ QNTQAQPTKAASANS >gi|289656360|gb|ADEA01000007.1| GENE 117 130505 - 131710 1034 401 aa, chain - ## HITS:1 COG:no KEGG:c0360 NR:ns ## KEGG: c0360 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 15 399 21 407 415 224 34.0 4e-57 MFCLLSMQTAAAIELRDILKASLLNDPSVLEAKATEDSAKSTTKATRARHYPVLTLTGVQ VLKQDNKYSSNDRENGIGVRGSMNLYSWGGIQAAVRRDKSKEEYFKYKYFETQEQLGSEI GKLYLNALRAKEMLLINRKSLVRHNNLLKDLNVIVKYDGGRRSELIEARARQLQVETAIS QQQRTMELALSRLSRYTGRKLGSSDLQDPFKSETASSLIKNYKSSDGKLSPSYLAQRAEQ ESVKGELAVSKSERLPAFNLEGVAGKESKQLYVNMAWNVLDIAARHNVQKNAHALVAAEA KSEQILRDSSEKAQTAEIDMMQSEQRADITAQHIEAQKDVVKTYELQFKIARRTLTDVLG AYNELSSIEQENVTAHNDFRDAALDYLVAQSQMAVWAGIKK >gi|289656360|gb|ADEA01000007.1| GENE 118 131947 - 132024 85 25 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MYIKGYGENVRINNHPRNINNDSIL >gi|289656360|gb|ADEA01000007.1| GENE 119 131980 - 132117 62 45 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIVYPDILTITFDIHTFIDSMVILITFTFAYNISCKGFAVLHTYK >gi|289656360|gb|ADEA01000007.1| GENE 120 132169 - 132954 1172 261 aa, chain - ## HITS:1 COG:NMB1347 KEGG:ns NR:ns ## COG: NMB1347 COG0483 # Protein_GI_number: 15677212 # Func_class: G Carbohydrate transport and metabolism # Function: Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family # Organism: Neisseria meningitidis MC58 # 1 260 1 260 261 489 88.0 1e-138 MNPILNTAFKAARRAGQMMIRASGNLEAVKIDSKAFNDFVSNVDRESEMILVDALKEAYP HHKITCEESGSHGKSDAEYEWIIDPLDGTTNFLHGHPQYAISMALLHKGVLQEALVYAPE RNDLYMASRGQGALLNDRRIRVSNRVELNRCLIGTGFPVVDQSMMDKYLAILKDFLSKTA GGRREGSAALDLCSVAVGRLDGFFEFNLKPWDVAAGALIVKEAGGIVTDMQGNDTWLQTG NIVAGNPKVLAQMLQIISAHN >gi|289656360|gb|ADEA01000007.1| GENE 121 133141 - 133956 1145 271 aa, chain + ## HITS:1 COG:NMB1348 KEGG:ns NR:ns ## COG: NMB1348 COG0565 # Protein_GI_number: 15677213 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylase # Organism: Neisseria meningitidis MC58 # 1 271 1 271 271 465 87.0 1e-131 MNQLKPALPDFLNNIRIVLTRTSHPANIGSAARAMKTMGLSDLVLVAPNLMSTPMTAVPP VFDPQNPQNFKLPEESFTLASGAADVLHNARITATLDDALADTTISCALTSRRREITAPL QTPRKLVPELLQAARRGEKVALVFGNETFGLSIEEVQACNRLMTINGNPDYFSLNLAQAV QVVCYEIFSQTDMPMTHLQQEDHAATHEQIKGMVAHMESVMDDIGFFNRRNSERLMRRMQ SLFGRANTQTEDIDILRGFFNTVSHRVNKKD >gi|289656360|gb|ADEA01000007.1| GENE 122 134020 - 134868 860 282 aa, chain + ## HITS:1 COG:NMB1349 KEGG:ns NR:ns ## COG: NMB1349 COG3782 # Protein_GI_number: 15677214 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 1 282 1 285 285 428 75.0 1e-120 MNYALDALWWKLTAPSVRDLASLLTAPPLWQSGCELSVRELLGEQGFRYLLALDADPAPL TEHLTQRAPFGHRLGIYAEELLAFWFAHAPHAKLHARNLPVFSDGQTLGAADFVVSLNRQ VYHIELACKYYGGSQVQDLRGLNPKDMLAGKAAKLVQQLNLLHTPQGRETLTTQALPDSP VSVSVVRGIGFFPHGFDAFEPLLNPYGWRGVYIRNWTEYRFERTEARYHLLDRMAYLAPA RVAETDTLNKTEIRRIDNGLIAVLELRPDGFWHEAERIMKAV >gi|289656360|gb|ADEA01000007.1| GENE 123 134905 - 136161 1863 418 aa, chain + ## HITS:1 COG:NMA1563 KEGG:ns NR:ns ## COG: NMA1563 COG0144 # Protein_GI_number: 15794456 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA and rRNA cytosine-C5-methylases # Organism: Neisseria meningitidis Z2491 # 1 418 1 418 418 735 91.0 0 MNAAQLDHTAKVLAEMLTFKQPADAVLSGYFREHKKLGRQDRHKIAETAFAALRHYQKIS TVLRRPHAQPRKAALAALVLGRSTNISQIKDLLDEEETEFLSSLKARKTEFSDDLHTAAE LPQWLVEQLQKHFSKEEILAFGRSTNQAAPLDIRVNTLKGRRDKVLPLLQAESPDAEATP YSPWGIRLKNKIALNKHELFLDGTLEVQDEGSQLLALLVGAKRGEIIVDFCAGAGGKTLA VGAQMANKGRIYAFDIAEKRLANLKPRMTRAGLTNIHPERISSEHDSRIARLTGKADRVL VDAPCSGLGTLRRNPDLKYRQSPETVAKLLEQQHSILDAAAKLVKPQGRLVYATCSVLPE ENEMQVERFLEEHPEYELLDCAELLAGLKIDLNTGKYLRLDSAKHQTDGFFAAVLQRR >gi|289656360|gb|ADEA01000007.1| GENE 124 136286 - 136597 573 103 aa, chain + ## HITS:1 COG:NMA0984 KEGG:ns NR:ns ## COG: NMA0984 COG0278 # Protein_GI_number: 15793941 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin-related protein # Organism: Neisseria meningitidis Z2491 # 1 103 1 103 103 189 88.0 1e-48 MTTIHDQIKEVVTTHPIVLFMKGTKQFPQCGFSSRAVQILKAVGCENYVTVNVLENDAVR QGIKEYSDWPTIPQLYVNGEFVGGADIMMEMYEAGELQELLKA >gi|289656360|gb|ADEA01000007.1| GENE 125 136728 - 137354 1220 208 aa, chain + ## HITS:1 COG:NMA0985 KEGG:ns NR:ns ## COG: NMA0985 COG0035 # Protein_GI_number: 15793942 # Func_class: F Nucleotide transport and metabolism # Function: Uracil phosphoribosyltransferase # Organism: Neisseria meningitidis Z2491 # 1 208 1 208 208 394 93.0 1e-110 MNVTIIDHPLVKHKLTLMREADCSTYKFRTLTTELARLMAYEASRDFGTEKYIIDGWCGQ IEGDRIKGKTLTVVPILRAGLGMLDGVLDLIPTAKISVVGLQRNEETLKPVSYFEKFVDS MEKRPALIIDPMLATGGSMVATIDLLKAKGCRHIKALVLVAAPEGVKAVNEAHPDVTIYT AALDSHLNENGYIIPGLGDAGDKIFGTR >gi|289656360|gb|ADEA01000007.1| GENE 126 137433 - 137756 666 107 aa, chain + ## HITS:1 COG:NMA0986 KEGG:ns NR:ns ## COG: NMA0986 COG4390 # Protein_GI_number: 15793943 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 106 1 106 106 137 66.0 6e-33 MNFQDNLSAMPDISHLSGLDVLDAQGKVLHHIPAVQGKLGSLKLYNALTQEFDNRLDSAA AERGLSLFAEHTADARANPGKHPNIDLLFKVKTENLVLQLRPVEARS >gi|289656360|gb|ADEA01000007.1| GENE 127 137877 - 138683 1081 268 aa, chain + ## HITS:1 COG:NMB1475 KEGG:ns NR:ns ## COG: NMB1475 COG5266 # Protein_GI_number: 15677329 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Co2+ transport system, periplasmic component # Organism: Neisseria meningitidis MC58 # 1 268 1 268 268 459 80.0 1e-129 MNKTALLLACTLLCSTAAHAHRVWVETAHTHGGEYLKAELGYGEFPELEPIAEDRLHIFS KPMQLITEKGKENLVRKGSYNYQYQSSKPVKDGSYLVTAEYRPTFWSKNKDGWKQADMTK MPDATYCEQTRMYGKNIVNVGHESADTKVITRQIGQALEIVPLNNPANVNVGEPFKVKVL FNGEPLPNATVTATFDGFDTSDRSKTHKTEAQAFSDTTAADGTVNIIPLRQGFWKASVEH KTDYPDQKICQKQADYTTLTFQIGHSHH >gi|289656360|gb|ADEA01000007.1| GENE 128 138768 - 139328 600 186 aa, chain - ## HITS:1 COG:NMB1496 KEGG:ns NR:ns ## COG: NMB1496 COG1187 # Protein_GI_number: 15677349 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Neisseria meningitidis MC58 # 1 186 1 186 186 293 74.0 9e-80 MDDLIAFNKPCGVICQFSEHEKHPCLKDYVDRPGFYPAGRLDTDSEGLLLLTDNGVLQAQ IADPKFKREKTYWAQVEGSPDEEKLDLLCNGMDLGGFVTRPAKVRLLEAGEADILWPRNP PVRMRKTVPDFWLEIRIAEGKNRQVRRMTAKAGYPCLRLVRVAVGRLNVFDLGLGLGEWR FAPFRP >gi|289656360|gb|ADEA01000007.1| GENE 129 139791 - 142016 3601 741 aa, chain + ## HITS:1 COG:NMB0920 KEGG:ns NR:ns ## COG: NMB0920 COG2838 # Protein_GI_number: 15676815 # Func_class: C Energy production and conversion # Function: Monomeric isocitrate dehydrogenase # Organism: Neisseria meningitidis MC58 # 1 741 1 741 741 1352 95.0 0 MTQKSTIIYTHTDEAPALATQSLLPIVQAFTRHAGIEVKTSDISLSGRILAVFPEYLTEA QRVPDALTKLGELVKQPDANVIKLPNISASVPQLTAAIKELQAKGFAVPDYPADPQTDEE KAVRERYDRIKGSAVNPVLREGNSDRRAPKAVKNFAKKNPHSMGAWTKDSKTHVATMQSG DFFHNEQSVTVPDATSVSIVFTDKQGNKKELREPVALKAGEIIDATVMSKKALLAFLAEQ VQDAKAKGVLFSLHMKATMMKVSDPIIFGHAVKVFFAPVFEKFGDKLAAAGVNVNNGFGN LLANLDKLDADTRAAVEAEIAAVYAANPDLAMVDSDKGITNLHVPSDVIVDASMPAMIRN SGRMWDKDGKARDTKAVIPDSSYAGVYQATIDFCREHGAFDPTTMGTVPNVGLMAQAAEE YGSHNKTFEIEADGQVQVIDAAGKVLMQHDVEAGDIWRMCQTKDAPVKDWVQLAVNRARL SNTPAVFWLDENRPHDKSLLAKVTAYLAELDTDGLDIRVLAPEEAAKFSLGRLKNGEDTI SVTGNVLRDYLTDLFPILELGTSAKMLSIVPLMNGGGMFETGAGGSAPKHVQQFLEENHL RWDSLGEFLALAVSFEHLAQKTGNTKAQVLADTLDAATEKLLLNDKSPKRKAGELDNRGS HFYLTLYWAQELAAQDKDTELKAAFAPLAKSLAENEAKIVAELSAAQGKAADIGGYYAPD AAKAAQAMRPSATFNQALAAL >gi|289656360|gb|ADEA01000007.1| GENE 130 142098 - 142541 788 147 aa, chain + ## HITS:1 COG:BS_ywlF KEGG:ns NR:ns ## COG: BS_ywlF COG0698 # Protein_GI_number: 16080745 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase RpiB # Organism: Bacillus subtilis # 1 144 1 145 149 95 35.0 3e-20 MRIVIAAPSNGTELKNALKARLQTDPRVSRLTDLSTPDGTYPQLSFAAAQEVAAGRADRA ILICGTGVGTAIAANKVRGIRAATAHDLVTVRGSVENYDAQVLCMGQNVIAAPAAWALVD IWLDLRHDTSSGYAPKVGEIDAFERGA >gi|289656360|gb|ADEA01000007.1| GENE 131 142674 - 144053 1866 459 aa, chain + ## HITS:1 COG:NMA1022 KEGG:ns NR:ns ## COG: NMA1022 COG0534 # Protein_GI_number: 15793978 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Neisseria meningitidis Z2491 # 1 459 1 459 459 798 98.0 0 MLLDLNRFSFSVFLKEVRLLTALALPMLLAQVAQVGIGFVDTVMAGGAGKEDLAAVALGS SAFATVYITFMGIMAALNPMIAQLYGAGKTGEVGETGRQGIWFGLFLGIFGMVLMWAAIT PFRNWLTLSDYVEGTMAQYMLFTSLAMPAAMVHRALHAYASSLNRPRLIMLVSFAAFVLN VPLNYIFVYGKFGMPALGGAGCGLATMAVFWFSALALWIYIAKEKFFRPFGLTAKFGKPD LAVFKQIWKIGAPIGLSYFLEASAFSFIVFLIAPFGEDYVAAQQVGISLSGILYMIPQSV GSAGTVRIGFSLGRREFSRARYISGVSLVSGWVLAVITVLSLVLFRSPLASMYNNDPAVL SIAATVLLFAGLFQPADFTQCIASYALRGYKITKVPMFIHAAAFWGCGLLPGYLLAYRFD MGIYGFWTALIASLTIAAVALVWCLELCSREMVRSHKVV >gi|289656360|gb|ADEA01000007.1| GENE 132 144119 - 144892 623 257 aa, chain + ## HITS:1 COG:ECs0285 KEGG:ns NR:ns ## COG: ECs0285 COG3680 # Protein_GI_number: 15829539 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 2 208 6 193 257 115 34.0 7e-26 MFSTSIIEKLAYYVYCLIDPRDGNIFYVGKGVGNRVFHHALGSLQETETPSDKIALIREI HKSGHQPVYYILRHNIQTDKQAFEYEAMAIDLLSLVKPSQQPLTNIQGGTHSSEVGLMSL SELKRKYDAQELKTDKPIVLITINNEYEKLKKGIRSGNIPEANRDKEIYERTRKYWKIGS RREKAKYAVAVYRGWTLAVYEIERWISADDIIQGRWMFEGKPLPDDSDIYKEIVNKLTYS SQENYKAPQNPITYRNC >gi|289656360|gb|ADEA01000007.1| GENE 133 144939 - 145979 1031 346 aa, chain + ## HITS:1 COG:NMB0811 KEGG:ns NR:ns ## COG: NMB0811 COG0812 # Protein_GI_number: 15676709 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate dehydrogenase # Organism: Neisseria meningitidis MC58 # 1 346 1 346 346 666 92.0 0 MQPIQYQTDLTPYNTFGLRAQAQAFIALEHADELRDIVRLPEFDRNTVLWLGGGSNILLM QDYAGLVVHMENKGIREIARSDGLVYIEAQAGEIWHDFVLHTVALGLNGLENLSLIPGTV GASPVQNIGAYGVEAKDVIHSVRCFDLDTETFVELSNADCRFAYRESLFKQEGKGRYVIV SVVFALKECFEPNLGYGDLAAAVAERSAGRTPTAKDVSDAVCAIRNSKLPNPNVLGNVGS FFKNPVVSAEKAATLLQRHPNMPRYPQPDGSVKLAAGWLIDQCRLKGFQIGGAAVHDRQA LVLVNKNNASSDDIWQLARHVCNTVFTRFQVELHAEPNWLPASYGL >gi|289656360|gb|ADEA01000007.1| GENE 134 146014 - 146691 931 225 aa, chain + ## HITS:1 COG:NMA1020 KEGG:ns NR:ns ## COG: NMA1020 COG1309 # Protein_GI_number: 15793976 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Neisseria meningitidis Z2491 # 8 216 3 211 216 370 88.0 1e-102 MRARSYDVARESKINTYTRIINDSLILFNEEGERNVSTNHIAAHLGISPGNLYYHFRNKD EIIVQLFKRYSEALLEYLNDTALPSSVEDSINYMAGIYDVMWEYRFLFSDVNTLLARSSE LLGEHNNFTQAKVSPLLVNLLSQLNGLNIIRADQIAMNDLAVNMWMITKYWFDFDSSLRG RAKLTKDSKARGIRRTLSLLRPYLLPQYIEEFDRKISAAADIGNS >gi|289656360|gb|ADEA01000007.1| GENE 135 146790 - 147566 970 258 aa, chain + ## HITS:1 COG:NMA1019 KEGG:ns NR:ns ## COG: NMA1019 COG0451 # Protein_GI_number: 15793975 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Neisseria meningitidis Z2491 # 5 258 6 258 258 337 66.0 2e-92 MNTTPPDCAILGLGYLGLPLAQKLYERGSRVCAVKRSLTSDDINLPIRLDTADLNRPDVF QTAFWQHWADKPTWFCLLPPSPLAHYADTLKQWLALAEHMGVQHIVYTSSTSVYGNAVRV CDENTPPDPQTETAVQILAAEKILLAGRIPHIDILRLGGLYSATRHPLNRLLLKNNIRGG RQPVNVVHQDSAVAALFQTALHPQGRRIRNIVEPSHPARAEFYAAEAAKLGLPAPDFNSA DRSGGKIVNTVFGNILSL >gi|289656360|gb|ADEA01000007.1| GENE 136 147618 - 148187 819 189 aa, chain + ## HITS:1 COG:NMA1018 KEGG:ns NR:ns ## COG: NMA1018 COG3165 # Protein_GI_number: 15793974 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 187 1 185 188 189 57.0 2e-48 MSALLPVINHLIRQNPEHQSSLAHFAGRTLCINLSGLRIKACIGSSGFLEPTAEEADTEI TFRNSAVQKILQGGKPGVGDIEIDGDLMLGMSLLPILGGLRYDAGDDLNRIFGETAAENI SARAAAIGDTVKQIGKSIAEQIGEFVREPESPVPDQATIAAWMEEVDKLRDDVARLSARL DRLERDIQT >gi|289656360|gb|ADEA01000007.1| GENE 137 148260 - 149150 1158 296 aa, chain + ## HITS:1 COG:NMA1017 KEGG:ns NR:ns ## COG: NMA1017 COG0061 # Protein_GI_number: 15793973 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar kinase # Organism: Neisseria meningitidis Z2491 # 1 296 1 296 296 452 71.0 1e-127 MNSQFQNIGIVTRPNTPDIQTNARTLIRFLHAEKLTVFLDEACTEDGSVFPEDTGGCHIT AKSGLGGRCDVVIVLGGDGTFLSVARKLAPHGTPVIGVNQGHLGFLTQVSRENMVESLRA MLAGQYRAEERILLEVSLERDGEICQQSLALNDAVISRGGAGQMIEFEVFIDKEFVYTQR SDGLIVSTPTGSTAYALAAGGPILQAGLRAFTLVPICPQSMTNRPIAIPDTSEIEVLITK SGDARVHFDGQSFVDIQNLDRIHIRRYPRPLRILHPTDYEYFKTLRQKLHWGEQLL >gi|289656360|gb|ADEA01000007.1| GENE 138 149520 - 151082 1630 520 aa, chain + ## HITS:1 COG:BS_opuD KEGG:ns NR:ns ## COG: BS_opuD COG1292 # Protein_GI_number: 16080059 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Choline-glycine betaine transporter # Organism: Bacillus subtilis # 16 513 9 499 512 230 29.0 6e-60 MSANEETQPKRPNYFLWTAPLVGALATIAVVKPTLFTNTITDVSKFFYMKFDWLIMWLPL LAFTVCMVVALSPRFGNIRLGGKDAQPEYSFFSWMNMLFTAGIGVGIVFFGPIEALWHYY HSPISIQAENLPEYQKVENAMSLALHVWGIPAWSLYTIGGLVLAYFMYQHKTECTPSAPL EYAFKHKKWAKPLGILITGIAIVSIAMSVSSSIAMASTQISSGMKIITGMDFSTIGWQTV VLIIIASLYTLGAVLPIEKGMKWLGDLTVVLSLLMLVFVFLVGPTHYFLSNLVVSIGNIL TQTVHHSFELYLFHNRDWLVWYPMAYWVWWITWTPFVGVFLAKISKGRTLREFVLASIMV PVGFLVIWFSVFSGFSLLDTVEGSGRLAEIANKGDYEGTFYYLLNMLPLSFATKPLTVVL FLGFVVTTVTSSAISLGIMTSNDGRRENKTRAVIWAVLMSLIAYAVIVTGKMEGIKAVGS FSGFPFVFIMYLWFAALWRQLKRDVPRVSPAAQEPVKNKE >gi|289656360|gb|ADEA01000007.1| GENE 139 151086 - 151214 214 42 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MEKQIMYLNQSVQDNILETVLMVLVLAFLCYVIKLAFIEKDD >gi|289656360|gb|ADEA01000007.1| GENE 140 151265 - 152935 2054 556 aa, chain + ## HITS:1 COG:no KEGG:KRH_22440 NR:ns ## KEGG: KRH_22440 # Name: not_defined # Def: acyltransferase (EC:2.3.1.-) # Organism: K.rhizophila # Pathway: not_defined # 1 556 1 574 577 265 31.0 3e-69 MSQTPRLPVPDLAETCERYLKLVRPLLSDEAFEKTAATTRNFESGKGKELQAALQQFAAE VETSWLIDAWLESYLRVRTPLPLASNVGFNIQTQGKDLAEWASALAAVCADYYHQRIPVP QTPQGTPVCMEQWKILQGAARVPQKEVDGFHFSPNGSRHIGVLHNGFYYRIAALDEQFEA YHPDAFRQAFEEILFDTHQNKYPVAVPCYLGGNETARVYQALQQHDDNTRLLKHIEQDLF HISISSEDLDADSDLAQTTFQPKQNVWCYKPTTYCYNTSTKRLYLHCEHTWADGGALKGI VTLAAAKLTALGGKKTRPAVHRYEWQLDADLQKNWAQWQQNYAKQADQMHVTSITIPFNG LTIPQGMSQDALMQFLLQYAQLTTYGSVRNTYEAVDVSHFKNGRTECVRPVSNESLVFVS TLLQEKPSREALDAALLEHKARIKASKLGQGTNRHLLGLQLMATKANSEIPEFFKDEGYQ TFTTDFLSTSTVGDNSTVVNFAFAPTSVGGLGINYTITPEGWLYTVSHTQEQQQKVNVFV EALKVGGKHLLEFLNA >gi|289656360|gb|ADEA01000007.1| GENE 141 153143 - 153790 241 215 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|153833204|ref|ZP_01985871.1| ribosomal protein S15 [Vibrio harveyi HY01] # 1 214 7 213 512 97 32 4e-19 MKIYTAAEMREHEQMAVDKGTTFEQLMENAGQAAAADLLCRFPKAGRALIVCGKGNNGGD GLVIARVLSEQDWQVDVVFVLGEKLSPLAQLNRERLNHSDGVSLIRPDELEGRTTGRLRT LKTGYDLVIEGIFGTGFSGALPETAAAVCRLLNQADGFKIALDIPTGLNCDTGEADKDTF RADLTYAFAAYKPAHMTDAGKAYCGETVCLDIGIE >gi|289656360|gb|ADEA01000007.1| GENE 142 154110 - 154376 384 88 aa, chain + ## HITS:1 COG:no KEGG:MS1159 NR:ns ## KEGG: MS1159 # Name: not_defined # Def: hypothetical protein # Organism: M.succiniciproducens # Pathway: not_defined # 4 85 3 84 86 115 69.0 4e-25 MSAIPLSKLSKGAVAHIDSIVPNPTFGELDPLVTRRLADLGFSGGMPLQVIAVGGFGRGP FAVRLGNQSQFSLRQEEAGKIMCHVIDG >gi|289656360|gb|ADEA01000007.1| GENE 143 154550 - 156412 2826 620 aa, chain + ## HITS:1 COG:RSp0251 KEGG:ns NR:ns ## COG: RSp0251 COG0370 # Protein_GI_number: 17548472 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+ transport system protein B # Organism: Ralstonia solanacearum # 7 620 18 620 621 604 56.0 1e-172 MELSYFALIGAPNCGKTVLFNGLTGAHAKVANYPGVTVDKREGAFLDDAAVRIIDLPGTY SLRTTSPDEAVAKDVAVGKLGIPPDAIIAVADATNLRMTLRMILELKTLGLPMVVSLNMS DVARKRGLNIDAAKLSELLGVPVLETVAVSASGVQAVREAVAKLPRKRSFPASPASAERT LDALESDKLYQEVESILAQVVRTEMTLPAWHKKLDDIVLHPVWGMIMLLVILFMVFQAVY TWAAPIMDAIEGGFTALGEWVGANMAPGILNDLLVNGVIAGTGSVLVFLPQITILFAFIL LLEDSGYLPRAAFLLDNVMAKSGLSGRSFIPLLSSFACAVPAVMSARTIHDPRERLVTIA VAPLLTCSARLPVYALIIAAVIPNRTVGGIFNLQGLTLFVLYLAGILSAALAAYIMKRLA RMKGNVQQFPLLMELPTFRTPNFKHIMTSLWDRVKAFLKRAGTIIFALTVILWGLVSWPQ PPAGATGAAIDYSLAGTIGHAIQPLFAPLGFTWEMCIAMIPGIAAREVVVAALGTVYAVS ASSEDAVQNALIPIVHNNWGLPTAFAFLAWYVYAPMCAATLAVIKRETKSAKDTFLITGY LFVMAYLAAFAVYQITSRIL >gi|289656360|gb|ADEA01000007.1| GENE 144 156412 - 156540 117 42 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTQYIIVGIIMLACLFFLLRKFLFKPKKHDCSSGCGKCGGCG >gi|289656360|gb|ADEA01000007.1| GENE 145 156771 - 157904 1429 377 aa, chain - ## HITS:1 COG:STM2959 KEGG:ns NR:ns ## COG: STM2959 COG1929 # Protein_GI_number: 16766265 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerate kinase # Organism: Salmonella typhimurium LT2 # 1 374 1 374 380 424 62.0 1e-118 MKILIAPDSYKESLSALQVANHIEKGFREVFPDAEYVKVPVADGGEGTVDTMVEATGGRK IECEVIGALGLPQRAFWGISGDGKIAFIEIASASGLEQVPPEQRNPLITTTYGVGELILA ALDEGVRHFIIGLGGSATNDGGAGMLQALGVGLKDADGRELACGGAALAQLAEIDVGGLD GRLKECRFDVACDVSNPLVGRQGASRIFGPQKGATPEMVETLDQALSRYAKVIEQKLDVE VKDLPGAGAAGGLGAAFSGVLGGRLKSGIGIITEFLRLEESMKGAALVITGEGRIDSQSI NGKVPVGVAALAKKHNIPVIGIAGSLGWDVEVVNGYGIDAVFSILNKCCTFPEAAAETAE NLELTARNIAKLLKMSL >gi|289656360|gb|ADEA01000007.1| GENE 146 157988 - 158101 112 37 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSAAFFGKGVGASGGAVMADTAPKEIMGPAGGLFKRR >gi|289656360|gb|ADEA01000007.1| GENE 147 158335 - 159996 2691 553 aa, chain + ## HITS:1 COG:NMA0952 KEGG:ns NR:ns ## COG: NMA0952 COG0497 # Protein_GI_number: 15793909 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Neisseria meningitidis Z2491 # 1 552 1 552 557 770 79.0 0 MLLALSLRDFVIVETLDLDFQNGFTVLTGETGAGKSITLDALGLLLGDKADYSQIRSGAK EARLSALFDLSGLTGLQEELRAQGLLDEGSEELSIRRIIDVKGKSRSYINNQAATLSQLK TVGEQLIDIHGQNAHHSLNQESAQRRLLDAFAGSLEQAETVRQRYQNRENAKKALHEARN QAENTAIERERLEWQFNELNQLGLKQGEWETLNQSHDSLAHAAELLQAAAETGETIDGDN GIQRQIYRCQKLLGSLQAIEPRFAESLNMLASIEAELGEISANMRDVASRTDIDPDELAK QEQRMGELMGAARKYRVEPQDLPAKLEEIGLNLQNLHAAGDIAALEAAVARSEAEYDEAA QTLSAMRREAAARLGDETTGHMQHLAMKGAQFHIELLPSPPTAHGLEQVQYQVSANRGSP LRPLNKVASGGELARISLALQVVTSRHTRVPTLIFDEVDTGIGGGVAETVGKALRALGGQ HQVLAVTHLPQVAACGENHWQVHKHSDGSQTVSRISVLDRAGRIEEIARMLGGETITDTT RSHAAELLQLAAG >gi|289656360|gb|ADEA01000007.1| GENE 148 160072 - 160251 172 59 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298368992|ref|ZP_06980310.1| ## NR: gi|298368992|ref|ZP_06980310.1| hypothetical protein HMPREF9016_00661 [Neisseria sp. oral taxon 014 str. F0314] # 1 59 2 60 60 115 100.0 8e-25 MKKLCLLIASVGMAAPVFANDYGNYTKEELRKLCEFQKQSIQRKYNGTPACDELRRRGG >gi|289656360|gb|ADEA01000007.1| GENE 149 160425 - 161381 310 318 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|212636859|ref|YP_002313384.1| Glutathione synthase; Ribosomal protein S6 modification enzyme [Shewanella piezotolerans WP3] # 1 314 1 320 345 124 29 4e-27 MKILFIADPLSTFKTYKDTTYAMMREMAKRGWRLSHALSGELSVRQGLVTAQAAPFEFIG AKHDRDHEWFAAADKIQTALKDFDAVIMRTDPPFDMQYLYATQLLTLAAEQGAKVFNSGQ AMRDFNEKLAILNFSRFTAPTLVTTRSADVRAFLAEHGDIIIKPLDGMGGMGIFRLTEKD PNIGSILETLMQLDSRTIMAQRYIPEIVHGDKRILIIGGEVVPYALARIPQNGETRGNLA AGGRGVAQELSEHDREIAETLAPELKRRGILLAGLDVIGSNLTEVNVTSPTGFQEIMKQK DFDVAAMFADAVQSWAAR >gi|289656360|gb|ADEA01000007.1| GENE 150 161510 - 162043 570 177 aa, chain - ## HITS:1 COG:PA3846 KEGG:ns NR:ns ## COG: PA3846 COG1335 # Protein_GI_number: 15599041 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Pseudomonas aeruginosa # 9 174 11 176 180 113 41.0 2e-25 MNPENTLCLVVDVQERLLPVLHGADEMVGRCRVLLQGMRALGVPLLATEQYPKGLGKTVP AVQLLLDGAPVFEKTRFSACLPQVGEILKQKRIANVVLAGAETHICMLQTVLDLRAAGLE VYVPFDCTASRHPDNKENGLQQMRDAGAVVSNTESLLFMLLGDAGHPAFKAVSKLIR >gi|289656360|gb|ADEA01000007.1| GENE 151 162176 - 164215 2563 679 aa, chain - ## HITS:1 COG:NMB1788 KEGG:ns NR:ns ## COG: NMB1788 COG1200 # Protein_GI_number: 15677628 # Func_class: L Replication, recombination and repair; K Transcription # Function: RecG-like helicase # Organism: Neisseria meningitidis MC58 # 1 679 2 680 680 1206 93.0 0 MTPETQKQLKITDVSAKKLDKLNLHTAWDLVLHLPLRYEDETHIMPIKDAPIGVPCQVEG EVIHQEVTFKPRKQLIVQIADDSGSVLFLRFIHFYASNQKQMAVGKRIRAVGEIKHGFHG DEMIHPKIRDAESSGLAESLTPVYPTVNGLNQPTLRRIIQTALDVTPLHDTLPDALLDRL KLPHLAESLRLLHSPPPSFTIRQLSDGALPAWQRLKFDELLAQQLSMRLARQKRVSGTAA ALGGDGTMTQALRHALPFALTDAQERVVSEIRRDMAQTHPMHRLLQGDVGSGKTIVAALS ALTAIESGAQAAVMAPTEILAEQHFIKFKQWLEPLGLEVVWLSGSQRKKAKDEAKAKLAD GTVKIAVGTHALFSDDVEFQNLGLVIVDEQHRFGVAQRLALKNKGRDVHQLMMSATPIPR TLAMSFFADLDVSVIDELPPGRTPIKTRLVNNVRRVEVEGFVLNICRKGQQAYWVCPLIE ESETLQLQTATETLEQLQAALPELNIGLVHGRMKAAEKAEVMAEFAAGRLNVLVATTVIE VGVDVPNAALMVIEHAERMGLAQLHQLRGRVGRGAAESVCVLLFAEPLSELAKARLKVIY EHTDGFEIARQDLNIRGPGEFLGARQSGVPMLRFANLEEDLHLLEQAREIAPMLIEQNPE IVEAHLARWLASREGYLGV >gi|289656360|gb|ADEA01000007.1| GENE 152 164304 - 164738 870 144 aa, chain - ## HITS:1 COG:NMA0674 KEGG:ns NR:ns ## COG: NMA0674 COG1952 # Protein_GI_number: 15793657 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecB # Organism: Neisseria meningitidis Z2491 # 1 144 1 144 147 243 89.0 6e-65 MSEELQPVFSIERLYVKDLSLEVPHAPQIFLEQGEPEVDMRVSTASEKLEDGYYSVDVTV TVTAKLGAERTMFLNEVTQSGIFHLENIPEDDIKLLLGVACPNILFPYAREAISTSVTRA GFPPVLLAPINFEAMYQQQQEGNA >gi|289656360|gb|ADEA01000007.1| GENE 153 164760 - 165017 381 85 aa, chain - ## HITS:1 COG:NMA0673 KEGG:ns NR:ns ## COG: NMA0673 COG0695 # Protein_GI_number: 15793656 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin and related proteins # Organism: Neisseria meningitidis Z2491 # 1 85 1 85 85 130 71.0 6e-31 MQPVTMYTGPSCPYCTMAKKLLASLGVSEINEIRVDRNPEDFAQMQRRTGQRSIPQIFIG DTHVGGFTDLYSLHQQGRLEALLNP >gi|289656360|gb|ADEA01000007.1| GENE 154 165264 - 166757 2289 497 aa, chain + ## HITS:1 COG:NMB1791 KEGG:ns NR:ns ## COG: NMB1791 COG1530 # Protein_GI_number: 15677631 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonucleases G and E # Organism: Neisseria meningitidis MC58 # 1 497 13 509 509 892 94.0 0 MLSGIPIPKDAVRPPETVLVNITPQETRVAVLEENNICELHIERNSGHSLVGNIYLGVVR RVLPGMQSAFIDIGLERAAFLHIVDVLEQRRNPDETQRIEHMLFEGQSVLVQVIKDPINT KGARLSTQISLAGRFLVHLPQEDHIGISQRIEDDTERNSLRERLTNLLPEDACHGYIIRT NAENATDEQLQSDIHYLTKVWEHIQEQAKIQPPETLLYQDLPLSLRVLRDMFSLDTQKIL VDSTENHRRMTRFAEQYVHGALGRIELFKGERPLFETHNVEQEISRALQPRVNLNFGSYL IIESTEAMTTIDVNTGGFVGARNFDETIFRTNLEACHTIARELRLRNLGGIIIIDFIDMA QEAHREAVLQELAKALAFDRTRVTLNGFTSLGLVELTRKRSRENLSQILCEPCPSCQGRG RLKTPQTICYEIQREVVREARRYDAQSFRILAAPNVIDLFLDEESQSLAMLIDFIGKPIS LAVETAYTQEQYDIVLM >gi|289656360|gb|ADEA01000007.1| GENE 155 166802 - 167194 688 130 aa, chain + ## HITS:1 COG:NMA1746 KEGG:ns NR:ns ## COG: NMA1746 COG0818 # Protein_GI_number: 15794639 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Diacylglycerol kinase # Organism: Neisseria meningitidis Z2491 # 1 126 1 126 127 157 69.0 5e-39 MRNESYASEKKGKTGIKRIINAYGYSKDGLKAAYRHESAFRQVCWLNLTLVILACIFDFD FSVRLLLITASFISLITELFNTAVEAAVDHTSTEKHELAKRAKDAGSAAQLAALVLLAVT WLSALWHTYI >gi|289656360|gb|ADEA01000007.1| GENE 156 167338 - 167817 873 159 aa, chain + ## HITS:1 COG:NMA1745 KEGG:ns NR:ns ## COG: NMA1745 COG2847 # Protein_GI_number: 15794638 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 159 1 157 157 197 68.0 1e-50 MKKLLATLVLAGLYQTAMAAGIQVEEPWARASVEGMKMSGAFMKINNDTNAQDFLVGGNS PVAERVEVHTHVNDNGVMRMREVKGGIPLPKKAVTELKPGSYHVMFMGLKQPLKEGETVP VTLKFKKAKPITVDVPVKNVPKAADDAHNHNHGGGAHAH >gi|289656360|gb|ADEA01000007.1| GENE 157 167963 - 169066 1729 367 aa, chain + ## HITS:1 COG:NMB1556 KEGG:ns NR:ns ## COG: NMB1556 COG0482 # Protein_GI_number: 15677407 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain # Organism: Neisseria meningitidis MC58 # 1 365 1 365 367 700 92.0 0 MNIENTPQNIIVGLSGGVDSSVTAALLKQQGHRVHGVFMQNWEDDDNDEYCSIKQDSFDA IAVADILGIDIDIVNFAAQYKDKVFAYFLKEYGAGRTPNPDVLCNAEIKFKCFLDYALEQ GADTIATGHYARKEVRNGVHYLLKGLDRNKDQSYFLYRLQPFQLERAIFPLGGLEKPEVR RLAAEFKLPTAAKKDSTGICFIGERPFREFLQKYLPTNNGKMVTPEGKAVGEHVGLMFYT LGQRKGLGIGGAGEPWFVAGKNLAKNELIVVQGHDHPLLYTRSLVMNDLSFTLPERPKEG RYTCKTRYRMADAPCGLRYLDDDTAELVFDEPQWAVTPGQSAVLYDGDVCLGGGVIMATD KPLIVNG >gi|289656360|gb|ADEA01000007.1| GENE 158 169183 - 170856 2727 557 aa, chain + ## HITS:1 COG:NMB1555 KEGG:ns NR:ns ## COG: NMB1555 COG0318 # Protein_GI_number: 15677406 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Neisseria meningitidis MC58 # 1 557 1 556 556 983 85.0 0 MEKLWLNSYEQGVNAEIDITRYKSITDVFNQSAQKFGGKPAFCNMGKTLTYAETAKLITD FASYLQNILKLPRGERVAIMMPNLLQYPVALFGTLQAGMVVVNTNPLYTPRELEHQLKDS GATTIVVLENFANTLELVLPRTQIKHVIVASVGDMFGTIKGTLMNFVLRKIKKAVPEYRI PNAVPFQTAMKQGAALPFTKVDITREDTAFLQYTGGTTGVAKGAVLSHGNICANMLQAKE WIRNQLREGKETVIAALPFYHIFALTVNLMIFTNAGSKIILITNPRDMKGFIGELKKERI SVFVGVNTLFNGMVNQPDFATVDFSDLRLTLGGGMATQKAVAEKWKDITGTPIVEAYGLT EASPGVCCNPLNIETYSGGIGLPIPSTEIELRDADGSTVAQGQPGELWVKGPQVMQGYWN RPEETAKAIDARGFLETGDIAVMDEKGWFKLVDRKKDLIVVSGFNVYPNEIEEVIAHNDK VMEVACIGVPNEKTGEALKVFVVKKDPSLTKEELIAFCRTELTGYKVPKDIEFRDELPKS NVGKILRRELREQALGK >gi|289656360|gb|ADEA01000007.1| GENE 159 170989 - 172623 2478 544 aa, chain + ## HITS:1 COG:NMA1742 KEGG:ns NR:ns ## COG: NMA1742 COG0504 # Protein_GI_number: 15794635 # Func_class: F Nucleotide transport and metabolism # Function: CTP synthase (UTP-ammonia lyase) # Organism: Neisseria meningitidis Z2491 # 1 543 1 543 544 1087 98.0 0 MTKFIFVTGGVVSSLGKGIAAASIATILESRGLNVTMLKLDPYINVDPGTMSPFQHGEVF VTDDGAETDLDLGHYERFINATMTRRNSFSTGQVYENVIAKERRGDYLGGTVQVIPHITD EIKRRIHEGAAGYDVAIVEIGGTVGDIESLPFLEAIRQMRSQLGRNNTLFAHLSYVPYIA AAGEIKTKPTQHTVKEMLSIGLQPDILICRMDRTMPADERRKIALFCNVEERAIVGSYDV DSIYECPEMLHDQGIDNIITEQLQLNVQQADLTAWKKIVHAIKNPKHTVKIAMVGKYVDL TESYKSLIEALKHAGIHTETDVQITFVDSENIEKNNGDVSMLKDMDAILVPGGFGSRGVE GKIAAVRYARENNVPYLGICLGMQIALIEYARDVAGLKGANSTEFDLKCAAPVVALIDEW QTADGSVETRDESADLGGTMRLGAQEVELKAGSLAAKIYGGEHIRERHRHRYEVNNNYVP ALEQAGLVIGGVSAGRERLVETIELPNHPWFFACQFHPEFTSNPRKGHPLFTAFVKAALN NKKV >gi|289656360|gb|ADEA01000007.1| GENE 160 172759 - 173502 615 247 aa, chain - ## HITS:1 COG:BH0360 KEGG:ns NR:ns ## COG: BH0360 COG3338 # Protein_GI_number: 15612923 # Func_class: P Inorganic ion transport and metabolism # Function: Carbonic anhydrase # Organism: Bacillus halodurans # 19 246 42 272 275 186 41.0 3e-47 MKIHLFLSLLMAASAATVSAANPQPNWSYTGANDSAHWGGLSKDFAVCKTGKQQSPVDFS SVKAVKGKQVVYRYDTSDYKVENNGHTLQATPQGKPQTVMINGKPYVFKQFHFHIPSEHT FKGKHLPMEAHFVHQAEDGTLAVVATVFKPGKNNPALTALVAKKLKTGESVQLKGLDIQT LLPEDTKSFHLKGSLTTPPCSENVTWVVFETPVQAGEAQIKAMRAIIGSANNRPVQPLNG REVNEIQ >gi|289656360|gb|ADEA01000007.1| GENE 161 173826 - 175580 2676 584 aa, chain + ## HITS:1 COG:ECs3618 KEGG:ns NR:ns ## COG: ECs3618 COG0155 # Protein_GI_number: 15832872 # Func_class: P Inorganic ion transport and metabolism # Function: Sulfite reductase, beta subunit (hemoprotein) # Organism: Escherichia coli O157:H7 # 16 583 15 569 570 849 70.0 0 MTTTADPRAKLPDTPLSGNEALKDRSDYLHGTIKDDLTDDFTGGFTADNFQLIRFHGMYE QDNRDIRAERTDQKLEPLKNMMLRCRLPGGIITPAQWLGIDEFAGDHTIYGSIRLTNRQT FQYHGILKTDLKLAHQSLHKLGLDSIATASDVNRNVLCTSNPVQSPLHQEAYEWAKRISM HLLPRTMAYADVWLDGEKVFTTEPTEPRNKEIADDVEPILGKTYLPRKFKTAVVIPPDND VDIHSNDLGFVAIEENGRLVGFNVLVGGGLSSEHGNTKTYPNTSYEFGFVPLEYTLNAAE AVVSTQRDWGNRSDRKAARTRYTLQRVGVEVFKEEVEKRMGIKFQPIRPYAFTHRGDHIG WVKGLEGNWHLTLFIENGRLLDYPGRPLKTGVREIAKIHPGDFRLTANQNLVVANVPPEL KDTIDKIAKEHGLISKSITIQRENSMACVALPTCPLAMAEAERFLPSFSDKIDEMFAKYG LEDEYIVLRVTGCPNGCGRAMLAEIGLVGKAVGRYNLYAGGNREGTRIPRLFKENITEPE ILEIVDGWVGNWAQNRLDNEGFGDFAIRTGIVKPVLDAPHDFWA >gi|289656360|gb|ADEA01000007.1| GENE 162 175861 - 176487 759 208 aa, chain - ## HITS:1 COG:NMA0951 KEGG:ns NR:ns ## COG: NMA0951 COG1386 # Protein_GI_number: 15793908 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing the HTH domain # Organism: Neisseria meningitidis Z2491 # 5 193 3 191 200 314 90.0 9e-86 MNSNEKLPPDALIEAALLTQTEPLNEKSMRELCVPPLSQDKLIDVLAQLKTRWQGRALQL VHTHEGWRFQIAQAAFERLGSLQEQRAPRYSRAVMETLAIIAYQQPVTRGDIEGIRGVAV SQNVMQTLQDRGWIEVIGHRDSVGRPALWATTATFLSDLRLDSLEELPPLTELGELVLPD LVETPPTDTDEEENDMLRPSENGELLLN >gi|289656360|gb|ADEA01000007.1| GENE 163 176487 - 177965 641 492 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298369007|ref|ZP_06980325.1| ## NR: gi|298369007|ref|ZP_06980325.1| tetratricopeptide repeat containing protein [Neisseria sp. oral taxon 014 str. F0314] # 1 492 1 492 492 843 100.0 0 MNFKIIANLTNMKLKLIKIFSSFIVLFSCLTYAETLDSDTQKYFEYRVNKLEDENTDLKK KIEEVEKNSRSVEQFKSVLEIHEKSMSANDRNMTNLSFLIGFISIFIPFVGYFWNRKFIN ETKEKLEGISKEYENKLSGYEKQMELFFSSWEQKRKDEKINIIKSSYDSTQNQNESTDNK LSIDKELFTENYNSLSINEDIEVKTNPEEIKIEESLTKVHNKLNRAKLLSEKGDIDEALR IYDDIILHKDDINSDCSKKRFYMANAYYNKGVLMAGRGEFDLAIEQYNKVIDEYKQDVDF DVKFLRVKSYINKLSLLLTLNHYKEAVIGYEKFFSNYIDDDNGEMKLAIVRGCYNYMIAL WKDADSGYLVKLEKFAHKINFKYRDDKNPFEIQVFLSRILNLLIFILAENNKLSESVSEF RGFVIQFSKEINPNIVLEVEKSFNDQIDLFVSLRDFGSIKEMCDIVLNNLQGNQAYYSLL ERADKFKSQLDS >gi|289656360|gb|ADEA01000007.1| GENE 164 177979 - 178923 1443 314 aa, chain - ## HITS:1 COG:NMB0739_1 KEGG:ns NR:ns ## COG: NMB0739_1 COG1161 # Protein_GI_number: 15676637 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Neisseria meningitidis MC58 # 1 309 1 309 342 598 97.0 1e-171 MAIQWFPGHMNKAKKAIAERTKSVDMVIEMLDARMPASSENPLLAQLSKGKPKLKILNKQ DLADPERTKIWLEHYNSRPDTRAIALDSSETGSHGKITQACRAMIPHRQGIDKPLRVLIC GIPNVGKSTLINGMIGKKSAKTGNEPGITKAEQRLFLADDFWLYDTPGMLWPKIIVEEGG YNLAAGGAVGRNALDEEEVALELLDYLRRHYLPMLQERYQADKDPSSHWDDNSWLEWIAK KRGAVLSGGRVNYQKAAENILTDFREGKIGRITLETPNQWETWLKKARQKEAELKAVREA RKAERKGQKSSENM >gi|289656360|gb|ADEA01000007.1| GENE 165 179006 - 179860 1040 284 aa, chain - ## HITS:1 COG:NMB0738 KEGG:ns NR:ns ## COG: NMB0738 COG1660 # Protein_GI_number: 15676636 # Func_class: R General function prediction only # Function: Predicted P-loop-containing kinase # Organism: Neisseria meningitidis MC58 # 1 284 1 284 284 464 77.0 1e-131 MKIVLISGLSGSGKSVALKQLEDLGYYCVDNLPMEMLPALVMHHIGRGDETRLGVSVDIR SRIDIVQTREQIRVLREEGHEIEVLFLEAEESVLIRRYSETRRGHPLAGQNMTLLEGLQK ERKWLWPLRDLAYCIDTSGMNAQQLRYAVQQWLQTERKGLLVILESFGFKYGTPNNADFV FDMRSLPNPYYDPELRPYNGMDKPIQDYLDGQNWAQEMVDDIDRFMQRWLPRMEEESRSY ITIAIGCTGGQHRSVYVVERLAQRLKGKYELLVRHRQAQNLAER >gi|289656360|gb|ADEA01000007.1| GENE 166 179841 - 180803 947 320 aa, chain - ## HITS:1 COG:NMA0947 KEGG:ns NR:ns ## COG: NMA0947 COG1493 # Protein_GI_number: 15793905 # Func_class: T Signal transduction mechanisms # Function: Serine kinase of the HPr protein, regulates carbohydrate metabolism # Organism: Neisseria meningitidis Z2491 # 1 320 1 320 320 551 87.0 1e-157 MPSVSVRCLYQDNQYKLQLAWAAGTAGADNRIGVEADKPVLALVGHLNFIHPNQVQVVGV AEAEYLKRLESGELAYDFNELFNIPMSLVIVANGLAVSPKLRDFCHTNNIPLLTSKLESP YLMDVLRIYLQRTLAVSVIKHGVFLDVFEIGVLITGDSGLGKSELALELISRGHSLIADD AVELFRTGPEMLEGRCPPMLRDFLEVRGLGVLNIRHIFGETSIRPKKLLNLIINLVSADD EYMKQLDRLSIRTETESILNVNIRSVTLPVAAGRNLAVLVEAAVRNYILQLRGKDSTREF LERHQTLLKENESKHENSID >gi|289656360|gb|ADEA01000007.1| GENE 167 180806 - 181255 668 149 aa, chain - ## HITS:1 COG:NMA0946 KEGG:ns NR:ns ## COG: NMA0946 COG1762 # Protein_GI_number: 15793904 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Neisseria meningitidis Z2491 # 1 149 1 149 149 231 80.0 2e-61 MSLIGEILPVSHIVLDLDVSSKKRIFEQVGLLLENETGLARADVFDCLFAREKLGTTGLG QGVAIPHGRHASVKKAVGAFIRTKEPVAFDAPDGKPVSLVFVLLVPENATGEHLEVLSKL AGKFSQKTVREALMAAVSAEEARNLLTAE >gi|289656360|gb|ADEA01000007.1| GENE 168 181418 - 182323 723 301 aa, chain - ## HITS:1 COG:NMB0735 KEGG:ns NR:ns ## COG: NMB0735 COG0382 # Protein_GI_number: 15676633 # Func_class: H Coenzyme transport and metabolism # Function: 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases # Organism: Neisseria meningitidis MC58 # 18 295 14 291 296 367 73.0 1e-101 MNIRRLLLKFFPRYAVGRLVVYCKLMRVDKPIGTLLLLWPTYWAMWVAADGYPGSTVLLA FTAGVFFMRSAGCVVNDFADRNFDGAVERTKNRPFARGMVTESEAVLLAVILCLCAALCL LPLNLFTWFMSLPALFLAVTYPFTKRFFPLPQLYLGVAFSFGIPMAFAAVTHSVPPVAWL LFVANILWTLAYDTVYAMADKEDDLKIGIKTSAVTFGDRDIEAVMLCHFWFTALMVVLGY KIQASWPYWAALPFVVWWQIEQCRAIKTRNRQVCFSTFLENNRIGLVWFLGLAGHYVWMS I >gi|289656360|gb|ADEA01000007.1| GENE 169 182744 - 183415 657 223 aa, chain + ## HITS:1 COG:no KEGG:NMO_1067 NR:ns ## KEGG: NMO_1067 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 1 222 1 222 224 230 53.0 3e-59 MSALLIKDYLRTQGLRLPAGGVHIAYLAAQAVINNGNASIDRSILWFGNDELVLADHIEQ TSENEALLKQIFMALDSVFGRNPDILSATVYAKMPSENPVSQLIRLTHQGRIPEQKLDIT DDNSRTYLASRTAQSGWMNIANDIPRWLSSGELEGGRNHAGKSQISAPVCTENGTILGVL HIEYPETDRADEAALTDWTALALALAEPMKILLKIEEKNEDQL >gi|289656360|gb|ADEA01000007.1| GENE 170 183412 - 184011 842 199 aa, chain + ## HITS:1 COG:NMB1254 KEGG:ns NR:ns ## COG: NMB1254 COG0807 # Protein_GI_number: 15677125 # Func_class: H Coenzyme transport and metabolism # Function: GTP cyclohydrolase II # Organism: Neisseria meningitidis MC58 # 1 195 1 195 197 332 78.0 2e-91 MNKKIKYIASCRLPTEWGVFTMHGFEEANGQEHIALSMGDFSDGLPVLSRIHSECLTGDA LFSQKCDCGPQLKAAMQAVQKEGRGIIVYLRQEGRGIGLINKIRAYRLQDQGLDTVEANL KLGLPVDARDFSLAKHIYDHLGVHEIKLLTNNPEKVSTLQQAGISIVERIPLQVGENSEN ERYLHTKAEKLGHFLFPEQ >gi|289656360|gb|ADEA01000007.1| GENE 171 184461 - 185564 1170 367 aa, chain + ## HITS:1 COG:no KEGG:NMB1269 NR:ns ## KEGG: NMB1269 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis # Pathway: not_defined # 1 364 1 364 365 541 69.0 1e-152 MTRPFVLPDTRPYPTSPIKNFLLLNAYQLAHNSSAASRKLSSEQLQTEIRGMLSQNHYIN LSLAMTMAPDVGTYQSLMDSVDTVLRAEKDGEIQWFALPIVIVAGCKQDKSLPLGLPTDA LFVCLQNYPYLRSLTQNTRWLPYLVQSDELSGITPGDWWQAKQNTDSAERFLQRFSLRPL SLPNGQSVHVVYALGYGGKDVQPSLGLNLQQAGLPLMQVWQEALALTGATLFTNPLSPNT PLKALADGSHTRQRMAMDVFSTNAIRSIRMQSPRVGVVAGARAGGQILFGFNATDSAFEV VPQIFTWELASTDKIAIVQQNFLDLMVECQIEHIYYLHDAFPENSELPTYAQALKLDGHN PLFSKEP >gi|289656360|gb|ADEA01000007.1| GENE 172 185561 - 186037 470 158 aa, chain + ## HITS:1 COG:NMB1267 KEGG:ns NR:ns ## COG: NMB1267 COG0394 # Protein_GI_number: 15677135 # Func_class: T Signal transduction mechanisms # Function: Protein-tyrosine-phosphatase # Organism: Neisseria meningitidis MC58 # 1 151 1 149 151 238 73.0 2e-63 MKNYKILFVCLGNICRSPMAEYVLRHQALQAGVTDRISADSAGTSGWHDGEDMHRGTRKV LAQHGINHSGFTSSKIRKTDGSFYDFIIAMDDNNLNELERLFGRHPEKIFKLTDLIPESG YHAVPDPWYTGDFDETFRLVDAGCKALLHKLGLSGYKD >gi|289656360|gb|ADEA01000007.1| GENE 173 186046 - 186408 262 120 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298369017|ref|ZP_06980335.1| ## NR: gi|298369017|ref|ZP_06980335.1| hypothetical protein HMPREF9016_00686 [Neisseria sp. oral taxon 014 str. F0314] # 1 120 5 124 124 213 100.0 3e-54 MNKTILSLTLSTIFLLFGCGDKEQAQTAGSFKQHIRSTFIETAAEKCVENAPQQNGLPKD KIRQVCACAADKLADSVSAEDLPDILAGNINPKLADKISTATLVCLKETRRSAIQTPTTK >gi|289656360|gb|ADEA01000007.1| GENE 174 186485 - 187459 1162 324 aa, chain + ## HITS:1 COG:NMB1060 KEGG:ns NR:ns ## COG: NMB1060 COG0158 # Protein_GI_number: 15676944 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1,6-bisphosphatase # Organism: Neisseria meningitidis MC58 # 1 322 1 322 324 513 77.0 1e-145 MNTLANFLPQHLQQNALPAELGSVLESIIAACVQINGKIRLGALSGVLGMAGTGNIQGED QKKLDVIANEILIETLKQNPNVAGLASEEEDTFVSTDENGGYLVLFDPLDGSSNIDVNIS VGTIFSILNKPAGRLNTESFLQKGNSQVGSGYVLYGPQTQLVFTLKHGVFIFTLNEHGEF VLTQENPQVPASTQEFAINMSNQRHWFPPMQRYIAELLEGNTGVRGKNYNMRWVASMVAE IHRILMRGGVFIYPQDKRDPAKPGKLRLMYEANPMSLILKQAGGASSNALETMLDIQPIG LHQRVAVVMGSREEVEYIDKLHLG >gi|289656360|gb|ADEA01000007.1| GENE 175 187547 - 188314 672 255 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 246 1 242 245 263 53 4e-69 MIKIRNIRKTFGENTILRGIDLDVGKGQVVVILGPSGSGKTTFLRCLNALEMPEDGQIEF DNERPLKIDFSKKTTKHDILALRRKSGMVFQQYNLFPHKTALENVMEGPVAVQGKPAAQA REEALKLLEKVGLGDKVNLYPYQLSGGQQQRVGIARALAIQPELMLFDEPTSALDPELVQ DVLNAMKELAQEGWTMVVVTHEIKFALEVATTVVVMDGGVIVEQGSPKELFDHPKHERTR KFLQQIRNDCGDYQI >gi|289656360|gb|ADEA01000007.1| GENE 176 188324 - 189040 950 238 aa, chain - ## HITS:1 COG:NMA0999 KEGG:ns NR:ns ## COG: NMA0999 COG0765 # Protein_GI_number: 15793955 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Neisseria meningitidis Z2491 # 1 238 1 238 238 395 94.0 1e-110 MLNNFLASLPFMTETRADMIVSAFLPMVKAGFMVSLPLAVASFLIGMVIAIAVALVRIMP SGGIVRKTLLKLVETYISIIRGTPLLVQLVIVFYGLPSVGIFIDPIPAAIIGFSLNVGAY ASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNEFIGLFKNTSL AAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFCKVLFLIQARLENRFDRYVAK >gi|289656360|gb|ADEA01000007.1| GENE 177 189030 - 189854 1183 274 aa, chain - ## HITS:1 COG:NMA0997 KEGG:ns NR:ns ## COG: NMA0997 COG0834 # Protein_GI_number: 15793954 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Neisseria meningitidis Z2491 # 1 274 2 275 275 445 92.0 1e-125 MLKKFVLGGMTALVLAACGGEGGSASSSAPAQSASASGSLIERINNKGTITVGTEGTYAP FTYHDKDGKLTGYDVEVTRAVADKLGVKVEFKETQWDSMMAGLKAGRFDVVANQVGLTSP ERQATFDKSEPYSWSGAVLVARNDSNIKSIDDIKGVKTAQSLTSNYGEKAKAAGAELVPV DGLAQSLTLIEQKRADATLNDELAVLDYLKKNPNAGVKIVWSAPADEKVGSGLIVNKGND EVVAKFSTAINELKADGTLKKLGEQFFGKDISVK >gi|289656360|gb|ADEA01000007.1| GENE 178 190005 - 190586 439 193 aa, chain - ## HITS:1 COG:no KEGG:Nhal_3070 NR:ns ## KEGG: Nhal_3070 # Name: not_defined # Def: LemA family protein # Organism: N.halophilus # Pathway: not_defined # 4 186 5 191 199 80 27.0 4e-14 MGLLILLFISISAAGLMMFREKLTLSRKHCAETFSAMKAALRLRHQSVRHMIDASQLYML GLDKLNNDLAATCSRAEALLDAASSPQDATVADLDKAESDLTDMLQQLQRVFDTYPESKT DVYLTAKSENMDAAETATVAVRQSYNQSAAGYNRLRAKFPLGLYAGLLGHHADAGVLKFE DSNAAQMSRYLKM >gi|289656360|gb|ADEA01000007.1| GENE 179 190792 - 191628 1146 278 aa, chain - ## HITS:1 COG:NMA1089 KEGG:ns NR:ns ## COG: NMA1089 COG0414 # Protein_GI_number: 15794037 # Func_class: H Coenzyme transport and metabolism # Function: Panthothenate synthetase # Organism: Neisseria meningitidis Z2491 # 1 277 1 277 278 457 81.0 1e-128 MQIIHTVKELREWRKTAGRVAFVPTMGNLHEGHLALVREAKKRADNVVVSIFVNRLQFGQ GEDFDKYPRTLGQDAAKLEGEGVAVVFAPDEKELYPNVEQRYNVEPPNLQNELCGRFRPG HFRGVATVVTKLFNIVLPDAACFGKKDYQQLAIIKGFAEDLNFNVEIVPVDTGRASDGLA LSSRNQYLNENERAEAPRLFRELNKIAEALHGGNLAYAELEQTAVRNLTAAGWTVDYVEI RHAESLAVAHAGDKDLVVLAAARLGGTRLIDNVEVSLC >gi|289656360|gb|ADEA01000007.1| GENE 180 191659 - 192450 984 263 aa, chain - ## HITS:1 COG:NMA1088 KEGG:ns NR:ns ## COG: NMA1088 COG0413 # Protein_GI_number: 15794036 # Func_class: H Coenzyme transport and metabolism # Function: Ketopantoate hydroxymethyltransferase # Organism: Neisseria meningitidis Z2491 # 1 263 1 263 263 424 88.0 1e-119 MITVNTLRKMKAAGEKISMLTAYESSFAALMDKAGVDVLLVGDSLGMTVQGRKSTLPVSL RDMCYHTENVARGTENAMIVADLPFGAYQQSKEQAFAASAELMAAGAHMVKLEGGVWMAE TTEFLQMRGIPVCAHIGLTPQSVFAFGGYKVQGRGDKAEALLRDAEAHDAAGAAIILMEC VPAALAKRVTEAVSCPTIGIGAGADCDGQVLVMHDMLGVFPGKTAKFVKNFMAGRSSIQE AVGAYIAEVKAKTFPAAEHIFEE >gi|289656360|gb|ADEA01000007.1| GENE 181 192983 - 193774 1209 263 aa, chain + ## HITS:1 COG:NMA1087 KEGG:ns NR:ns ## COG: NMA1087 COG0421 # Protein_GI_number: 15794035 # Func_class: E Amino acid transport and metabolism # Function: Spermidine synthase # Organism: Neisseria meningitidis Z2491 # 1 263 1 263 263 489 86.0 1e-138 MPRHPYRRLRPAKSDLPEVGISEEGNIRSLHLGSDTIQSSMNLDHPAELVLSYSRAMMGW LLFAEKTPKHITQIGLGGGSFARWIDSYLPDTKQTAVDINPQVIAVARSLFELPFEGENF EIVEADGAEYIKVFRHNTDAVLVDGFDGEQIIDALVEEPFFQDCRHALSPDGVFVTNWWS GDKRYQHFVERLLNVFEGRVLELPAESHGNMAVMAFQSSPKEQNLDKLKKRAEKLSEQYG LDFKRMLNDLKANNPNNGKHFYL >gi|289656360|gb|ADEA01000007.1| GENE 182 193891 - 194529 895 212 aa, chain + ## HITS:1 COG:NMB0868 KEGG:ns NR:ns ## COG: NMB0868 COG2945 # Protein_GI_number: 15676764 # Func_class: R General function prediction only # Function: Predicted hydrolase of the alpha/beta superfamily # Organism: Neisseria meningitidis MC58 # 1 208 1 208 213 349 81.0 3e-96 MLKPDIIQVPGPAGLLETIYLPAQQSPARGVAVINHPNPLQGGTNTNKVIQTAAKALCQL GFHCYLPNLRGVGNSEGVHDYGRGETQDCIAVIDYARSQHPDAPQFALAGFSFGGYVATF AAQERTPDWLLLMGAAVHHYTDRPEPSAVPDVAKTLVIHGAEDEVVALDKVLAWAGPQDL PVVVLAGSSHFFHGKLIALRNTILRFAPAISG >gi|289656360|gb|ADEA01000007.1| GENE 183 194616 - 196406 2632 596 aa, chain - ## HITS:1 COG:no KEGG:CAP2UW1_2831 NR:ns ## KEGG: CAP2UW1_2831 # Name: not_defined # Def: hypothetical protein # Organism: A.phosphatis # Pathway: not_defined # 302 593 12 304 308 165 33.0 5e-39 MENQDNRPVEEPVVAQETEDYAFGPETEAETETEAEGAAEAEEAAEIFSDMPSEKKAKRK KGKKKNKDKGRSAEAVQEEVIGTAKGVETMFRNAVRSEMELLALAATKANIMISLNGFIV SALMISGAFIFSSSPEFLIPASTFMITAAASIVFALLSASPDRIGKMQAARAWLKDFVCR RATLKDWKTRVSRAETRFFGGSQPNILIYEDRVKVQKERYWEMMQEIMGDRKQVYHKMSD HLYWLGLLADKQFKYINLSYAVFRWGLLASLAAFIGVKTLPSLLTSPASNTAELRALGIN MFNGVYEPSAVQQLPDGKLLIAEDEPNHAFSIISIDKTGRFIEDEALDTRVITGFKRRLS DLEALARDDEGFIYALTSHSRTRKGNRSPDREHLMRFKIQDGNVLGLTSYDNLTQVLETD HKLHDLIRERTKAEVSFEEINIEGMAFDPVKKRLVLGFRDPEFNNMALVAFISNPKDVFE RNAQPEFDEVAILDIDGGGIRSLNYDPVLKNYVIANEVKDENGQKFSQLWTWSGNPTDEP QKISLPNLQHITNVEAVDSITVNGKPQMILMGDEGNASQKITAKYMLVDYSQLGKD >gi|289656360|gb|ADEA01000007.1| GENE 184 196556 - 197284 602 242 aa, chain - ## HITS:1 COG:NMB1446 KEGG:ns NR:ns ## COG: NMB1446 COG0710 # Protein_GI_number: 15677303 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate dehydratase # Organism: Neisseria meningitidis MC58 # 2 240 11 249 254 257 57.0 2e-68 MVLGAGRTKIAVPLVAEDSDGLMRAAAQLRTLDFDLAEFRADFLKRADEADFVLAQLEKV REALPDTPLLFTFRRAAEGGSCPCGDDYYFALLRRAAESGLADIIDIELLAGDGPVGEAA AQVKAAGAAVLLCNHDFERTPPKDVIAGRLKKMEALGADICKIAVMPQSPQDVLTLLDAA YSVFQTASVPLVAVSMGRFGAVSRIAGGMFGSAMTFAAAEKASAPGQINVGELRNILDVL NG >gi|289656360|gb|ADEA01000007.1| GENE 185 197398 - 198090 1070 230 aa, chain + ## HITS:1 COG:CC0717 KEGG:ns NR:ns ## COG: CC0717 COG1814 # Protein_GI_number: 16124970 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Caulobacter vibrioides # 5 230 7 233 233 179 55.0 3e-45 MYSQHSERHFSNRNNWLRASVLGANDGLISTASLLTGVAAAAPDFQTLLLTGVSALIGGA VSMAAGEYVSVSSQSDTEKADLHKERYELEANPDAELEELTEIYRRRGLSDALAAEVAQA LMEHDALSAHARDEIGITETSAAKPMQAALASAGSFCAGAILPLLVALTAPTALIPTLAA TTLCGLAALGYASAKLGGAPVVPAVLRVCLWGVAALAVTGLIGKLAGVAV >gi|289656360|gb|ADEA01000007.1| GENE 186 198290 - 199829 1565 513 aa, chain + ## HITS:1 COG:NMA1491 KEGG:ns NR:ns ## COG: NMA1491 COG1197 # Protein_GI_number: 15794391 # Func_class: L Replication, recombination and repair; K Transcription # Function: Transcription-repair coupling factor (superfamily II helicase) # Organism: Neisseria meningitidis Z2491 # 1 512 1 512 1296 1001 94.0 0 MTYPIPKPREKSRWLNLSQGSLPLALARYLPHKRLKVVLTQDAEQALRLQTAWRFFRPHD TAVFLPDWETLPYERFSPHQDLVSERLSALWQIKSGAADVLFVPVATAMQKLPPVPFLAG RTFWLKTGQTLDIGRLKTDLVDAGYNHVSHVVAAGEFAVRGGIVDLFPMGSEMPYRIDLF DDEIDSIKTFDTETQRTISPVSEIRLLPAHEFPTDSEAQKIFRSRFREEVDGNPNDAAVY KAVSNGHFGAGVEYYLPLFFENELETLFDYIGDDALFVSLGDVHAEANRFWSDVKSRYAM AQGDETYPPLLPQHLYLSSDVFAGRLKNYGQVLPDVSGKEHTLPDLAVNRQSDEPLQALK DFQTTFEGRILLCAESLGRRETMLGFLQQNGLKAKPVSDWQGFLSAHEPLMITVAPLAYG FKLGGLQSPNQQQPTPDSEGEGKAVTDQTEFSAAATNPLPSPLPQEREQNVAAISDGLKT KSSLHLVKSTLHGQIQQQPTPSPVGEGWGEGER Prediction of potential genes in microbial genomes Time: Thu May 26 13:15:04 2011 Seq name: gi|289656359|gb|ADEA01000008.1| Neisseria sp. oral taxon 014 str. F0314 cont1.8, whole genome shotgun sequence Length of sequence - 42631 bp Number of predicted genes - 49, with homology - 45 Number of transcription units - 27, operones - 13 average op.length - 2.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 1/0.500 + CDS 2 - 2173 3105 ## COG1197 Transcription-repair coupling factor (superfamily II helicase) 2 1 Op 2 . + CDS 2266 - 3048 558 ## COG3440 Predicted restriction endonuclease 3 2 Op 1 . + CDS 3417 - 3599 74 ## 4 2 Op 2 . + CDS 3587 - 4081 733 ## COG2077 Peroxiredoxin + Term 4113 - 4151 10.2 - Term 4101 - 4139 10.2 5 3 Tu 1 . - CDS 4155 - 6851 3630 ## COG0612 Predicted Zn-dependent peptidases - Prom 6890 - 6949 5.8 - Term 6978 - 7038 17.1 6 4 Op 1 4/0.250 - CDS 7053 - 8252 1485 ## COG0303 Molybdopterin biosynthesis enzyme 7 4 Op 2 1/0.500 - CDS 8249 - 8830 928 ## COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A 8 4 Op 3 . - CDS 8827 - 9294 438 ## COG0314 Molybdopterin converting factor, large subunit 9 4 Op 4 . - CDS 9296 - 9544 414 ## Tbd_1026 molybdopterin synthase subunit MoaD - Prom 9679 - 9738 5.3 + Prom 9644 - 9703 4.2 10 5 Op 1 8/0.250 + CDS 9761 - 11722 2817 ## COG3850 Signal transduction histidine kinase, nitrate/nitrite-specific 11 5 Op 2 . + CDS 11719 - 12375 1169 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain + Term 12439 - 12480 9.6 - Term 12427 - 12468 9.6 12 6 Op 1 2/0.500 - CDS 12492 - 13031 992 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 13 6 Op 2 . - CDS 13083 - 13412 503 ## COG1539 Dihydroneopterin aldolase - Prom 13467 - 13526 3.0 + Prom 13412 - 13471 6.0 14 7 Tu 1 . + CDS 13495 - 14103 879 ## COG0344 Predicted membrane protein + Term 14120 - 14158 5.5 + Prom 14126 - 14185 5.6 15 8 Op 1 . + CDS 14215 - 15735 2052 ## HD0066 hypothetical protein 16 8 Op 2 . + CDS 15831 - 16670 987 ## COG2321 Predicted metalloprotease + Term 16688 - 16745 13.6 + Prom 16690 - 16749 6.3 17 9 Tu 1 . + CDS 16841 - 18223 2490 ## COG1109 Phosphomannomutase + Term 18238 - 18288 16.1 + Prom 18359 - 18418 5.4 18 10 Op 1 . + CDS 18441 - 19286 919 ## COG2961 Protein involved in catabolism of external DNA 19 10 Op 2 . + CDS 19325 - 20413 1338 ## COG3216 Uncharacterized protein conserved in bacteria + Term 20628 - 20658 -0.5 + Prom 20517 - 20576 3.7 20 10 Op 3 . + CDS 20712 - 21275 242 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase + Term 21500 - 21566 30.0 + TRNA 21377 - 21452 88.3 # Gly GCC 0 0 + TRNA 21478 - 21553 88.3 # Gly GCC 0 0 + TRNA 21582 - 21657 88.3 # Gly GCC 0 0 + TRNA 21677 - 21752 88.3 # Gly GCC 0 0 + TRNA 21791 - 21864 65.1 # Cys GCA 0 0 + TRNA 21876 - 21953 20.2 # Pseudo ??? 0 0 + TRNA 21993 - 22082 73.5 # Leu TAA 0 0 - Term 21977 - 22051 29.2 21 11 Op 1 . - CDS 22110 - 23180 412 ## COG0582 Integrase 22 11 Op 2 . - CDS 23057 - 23440 130 ## gi|255067354|ref|ZP_05319209.1| toxin-antitoxin system, antitoxin component, Xre family 23 11 Op 3 . - CDS 23383 - 23646 243 ## gi|298369051|ref|ZP_06980369.1| hypothetical protein HMPREF9016_00720 24 11 Op 4 . - CDS 23636 - 23869 170 ## gi|298369052|ref|ZP_06980370.1| hypothetical protein HMPREF9016_00721 - Prom 23924 - 23983 2.8 + Prom 23881 - 23940 1.7 25 12 Tu 1 . + CDS 24030 - 24161 70 ## - Term 23876 - 23911 -1.0 26 13 Op 1 . - CDS 24158 - 24604 585 ## gi|298369053|ref|ZP_06980371.1| conserved hypothetical protein 27 13 Op 2 . - CDS 24594 - 25196 593 ## Veis_5052 transfer origin protein, TraL 28 13 Op 3 . - CDS 25211 - 25363 71 ## gi|255067358|ref|ZP_05319213.1| protein TraL - Prom 25488 - 25547 4.2 - Term 25475 - 25519 -0.5 29 14 Tu 1 . - CDS 25589 - 25879 190 ## D11S_2296 TrbM mating pair formation protein-like protein - Term 25963 - 25994 1.0 30 15 Op 1 . - CDS 26000 - 26191 249 ## gi|298369056|ref|ZP_06980374.1| hypothetical protein HMPREF9016_00725 31 15 Op 2 . - CDS 26227 - 26469 349 ## gi|298369057|ref|ZP_06980375.1| hypothetical protein HMPREF9016_00726 - Term 26622 - 26666 1.1 32 16 Tu 1 . - CDS 26667 - 26996 310 ## gi|298369058|ref|ZP_06980376.1| hypothetical protein HMPREF9016_00727 - Prom 27114 - 27173 1.5 + Prom 28372 - 28431 5.3 33 17 Tu 1 . + CDS 28540 - 28761 311 ## gi|298369059|ref|ZP_06980377.1| hypothetical protein HMPREF9016_00728 + Term 28768 - 28803 5.1 - Term 28518 - 28560 0.3 34 18 Tu 1 . - CDS 28777 - 29445 -24 ## PLES_13381 hypothetical protein - Prom 29504 - 29563 8.0 + Prom 29446 - 29505 5.7 35 19 Op 1 . + CDS 29556 - 29768 161 ## 36 19 Op 2 . + CDS 29781 - 30548 559 ## gi|298369061|ref|ZP_06980379.1| conserved hypothetical protein + Term 30554 - 30606 6.0 + Prom 30953 - 31012 4.2 37 20 Tu 1 . + CDS 31042 - 31329 379 ## COG3905 Predicted transcriptional regulator + Term 31446 - 31480 -0.3 38 21 Tu 1 . - CDS 31356 - 31610 98 ## + Prom 31546 - 31605 2.5 39 22 Tu 1 . + CDS 31689 - 31925 287 ## gi|298369065|ref|ZP_06980383.1| hypothetical protein HMPREF9016_00734 + Term 31943 - 31983 9.9 40 23 Tu 1 . - CDS 31973 - 32380 262 ## gi|298369066|ref|ZP_06980384.1| conserved hypothetical protein - Prom 32430 - 32489 5.1 41 24 Op 1 . + CDS 32942 - 33340 526 ## Smlt3084 hypothetical protein 42 24 Op 2 . + CDS 33403 - 34155 422 ## Rmet_6243 hypothetical protein 43 24 Op 3 . + CDS 34203 - 34673 333 ## gi|298369069|ref|ZP_06980387.1| hypothetical protein HMPREF9016_00738 44 24 Op 4 . + CDS 34666 - 35214 411 ## gi|298369070|ref|ZP_06980388.1| hypothetical protein HMPREF9016_00739 + Term 35222 - 35262 5.6 + Prom 35449 - 35508 6.4 45 25 Tu 1 . + CDS 35541 - 36080 208 ## NMO_0784 putative phage associated protein - Term 36393 - 36462 26.0 46 26 Op 1 . - CDS 36495 - 36704 81 ## AOLE_15080 putative C-5 cytosine-specific DNA methylase - Term 36706 - 36736 2.0 47 26 Op 2 3/0.250 - CDS 36763 - 39801 1111 ## COG3250 Beta-galactosidase/beta-glucuronidase 48 26 Op 3 . - CDS 39819 - 41075 208 ## COG0477 Permeases of the major facilitator superfamily - Prom 41096 - 41155 3.7 - Term 41970 - 42012 5.1 49 27 Tu 1 . - CDS 42067 - 42630 963 ## COG3209 Rhs family protein Predicted protein(s) >gi|289656359|gb|ADEA01000008.1| GENE 1 2 - 2173 3105 723 aa, chain + ## HITS:1 COG:NMB1281 KEGG:ns NR:ns ## COG: NMB1281 COG1197 # Protein_GI_number: 15677148 # Func_class: L Replication, recombination and repair; K Transcription # Function: Transcription-repair coupling factor (superfamily II helicase) # Organism: Neisseria meningitidis MC58 # 2 713 662 1373 1379 1348 96.0 0 VEGKAVAAQSAIAVITESDLYQYVARSRVHNRRKKHAAVSDGLLRDLAEINIGDPVVHEE HGIGRYMGLVTMDLGGETNEMMLLEYAGEAQLYVPVSQLHLISRYSGQAHENVALHKLGS GAWNKAKRKAAEKARDTAAELLNLYAQRAAQSGHKFEINELDYQAFADGFGYEETEDQAA AIAAVIKDLTQAKPMDRLVCGDVGFGKTEVALRAAFVAVMGGKQVAVLAPTTLLVEQHAQ NFADRFTDFPVKVASLSRFNNSKATKAALEGMADGTVDIVIGTHKLVQDDIKFKNLGLVI IDEEHRFGVRQKEQLKRLRANVDILTMTATPIPRTLSMALEGLRDFSLITTAPSRRLAVK TFVKPFSEGSVREAVLRELKRGGQVFFLHNEVDTIENMRERLETLLPEARIGVAHGQLRE RELEQVMRDFLQQRFNVLLCSTIIETGIDIPNANTIIINRADKFGLAQLHQLRGRVGRSH HQAYAYLLTPEYITKDAEKRLDAIAAADELGAGFTLAMQDLEIRGAGEILGEGQSGEMIQ VGFTLYTEMLKQAVRDLKKGRQPDLDAPLGITTEIKLHSPALLPESYCPDIHERLVLYKR LAVCETVQQINAIHEELVDRFGLPEQPVKTLIESHHLRLAARELGIDAIDATSESVTVTF GKHHQIDPTEIILLIQTDKKYRLAGADKLKFTAQIEDVEARINTVKNVLRRLRVGVLVKD EAT >gi|289656359|gb|ADEA01000008.1| GENE 2 2266 - 3048 558 260 aa, chain + ## HITS:1 COG:NMA1036 KEGG:ns NR:ns ## COG: NMA1036 COG3440 # Protein_GI_number: 15793992 # Func_class: V Defense mechanisms # Function: Predicted restriction endonuclease # Organism: Neisseria meningitidis Z2491 # 107 259 215 365 372 97 38.0 3e-20 MPTLEIFIDMPDDEEYFTWRKNNSGGYVLNIKKSHIDDYPMIHRVKENGTGCMSTKKKDG TSAYTTNGYYKVCSNSISELEAYSWQEHHKALTPCGTCMKDYIPTFQIASQQSLEDDLNE LNQNLEKATTEKDKTQIQRLINARRGQGEFRNGVLKRYPQCPISGVDMPELLIASHIKPW RDCNDNERLDRYNGLMLAPHIDALFDNGLITFKEDGNIAPSKRLSKGNLSRLGITLEEKL EIHPDSEKYFEWHRKNVFKS >gi|289656359|gb|ADEA01000008.1| GENE 3 3417 - 3599 74 60 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAQDPTSFLNLKSLSGFQPNLHLPPEALSDGLLGKAVKTLYPRPCFYTRQHKERISSWLK >gi|289656359|gb|ADEA01000008.1| GENE 4 3587 - 4081 733 164 aa, chain + ## HITS:1 COG:ECs1903 KEGG:ns NR:ns ## COG: ECs1903 COG2077 # Protein_GI_number: 15831157 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Escherichia coli O157:H7 # 4 164 5 166 168 206 67.0 1e-53 MAQVTFQNNPVHTSGNLPAAGQTAPAFTLAAADLSDKTLADFAGKRKVLNIFPSVDTGVC AQSVRTFNKRASSLDNAVVLCISADLPFAQARFCGAEGLDKVVTLSSFRSSFAADYGVAL TDSPLRGLTARAVLVLDENDKVLHSELVAEITNEPDYDAALAVL >gi|289656359|gb|ADEA01000008.1| GENE 5 4155 - 6851 3630 898 aa, chain - ## HITS:1 COG:PM0804 KEGG:ns NR:ns ## COG: PM0804 COG0612 # Protein_GI_number: 15602669 # Func_class: R General function prediction only # Function: Predicted Zn-dependent peptidases # Organism: Pasteurella multocida # 1 799 1 825 923 151 23.0 5e-36 MKKLLLIFFIGFIGAGTASAAHAGQPVYAKGRLANGLTYHIFKIPSAEGRLAARLNVGVG AADENDGEEGIAHITEHMVFQSSPQYPQGLSDYLGRNGWQMGRHFNAQTGYDYTRYLFSP PQGSRQLEEVLKIYRQILQPQQFSAADWEKERQVVLSEWRQQQNLQNRLSRRQHALMYEG ARQGRYPPIGRLEAVQSARADTAGAFHNKWYGSNNAVLVLMGNLNIDGTAALIERTFGDM RPIALGVRRADEYEPRLKNGWHVGMVQDADNAEDKLSLVFRFKKQKAEAYAEQSYQRLLD NFAAYVVNRRIIRSGLDVGLKMDTLGCCTGSLMLDADIAPGQHREMLEVLRNLRQDILDH PATDEELGGYRKALHNNLLPQNAGIPDDLTKVIRLSEETILRGLPLPDAEIRAADRSQLY RINAKAVNRRITEWLDAPDKMIQVQVSQGSTVSLPSPADLNKTPERPSETQSGGKAAPEF AEPESGKILTERTGKQSDIRYLKLGNGDTAVLMRLPEAGRRVHFRAVSDSGSLAEPSEAW LAKLAAETVSQSAPQGMSAGGFRQWRQQERISYTYRLEDYRQITDAQANADSLKTLLQLY RSYQTVPDLSQWQQYAKRDEARFKVRQHSKSGRPQQVLEEMKYGRNLMPSGNNAYAGLTQ ARIKQKWQKLTAAPVHYYIVGNLPPEETAPLVAKYLAGIPRSAAAANDYPLRAGSESRHE AAGETEGAEIHAQSWQQADTLTPEKTEQIRLLNNLFNARLKDELRGRQQSAYAVKFKAET YPGLRRIESSLTFNTAADQAQAGWQAAKKVLRELPDGIGYAEARNLRKLFIEQENARRRS AEAWIERLSADRQAEGVLPYPNDAGRIADSITRNKLRETAKMMWSEDNEKVLTVMPKH >gi|289656359|gb|ADEA01000008.1| GENE 6 7053 - 8252 1485 399 aa, chain - ## HITS:1 COG:STM0846 KEGG:ns NR:ns ## COG: STM0846 COG0303 # Protein_GI_number: 16764208 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin biosynthesis enzyme # Organism: Salmonella typhimurium LT2 # 1 370 9 378 413 242 40.0 8e-64 MIDFETALAQLLDGCECRLKSRRLPLAAAANRILAQPLYAQYPAPMFDNSAMDGYAVCST DGSLREFAVVGRVQAGDAAAVPLREGEAVRIFTGAPLPGNTTAVVMQEQAEAEGGRLKVK AEIKAGQNMRLKAEEIQVGQELLAAGCKLDAAALGLAASQGFAEVEVYEPLKVLVFSTGN ELAEPGRPLSDGLIYDANRYQLLAWLQSLGMEVADGGIIPDDLAQTEALLKDAAQRFDAV ITSGGASVGEADYLKQAVENVGVLTTRSIAIKPGKPFGWGRVGTAAVFVLPGNPVAAFVT AHMLLAPALGKLSGRSGTAPYLPQITAKAAFGTRKAIKRREFLRVVLSRNGQGETVAELL PNQGSAMLATCAKAEALCEVPAMEVVNEGDNVRLHLLPR >gi|289656359|gb|ADEA01000008.1| GENE 7 8249 - 8830 928 193 aa, chain - ## HITS:1 COG:NMA1417 KEGG:ns NR:ns ## COG: NMA1417 COG0746 # Protein_GI_number: 15794329 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin-guanine dinucleotide biosynthesis protein A # Organism: Neisseria meningitidis Z2491 # 1 191 1 191 192 274 65.0 9e-74 MRIYALIMAGGMAKRMDGADKGLVLWHGKPLIDHVIDRIKPQVGHIAVSANRNLEEYTKR TPHVFSDSRQWQGLGPLVALCTAANDLQLATADWLLIVPCDTPKLPADLVEQFVAVAKRT PLCNAFYAETSGHQQYSVMFIRPQILQSAVPYLYTGQRTLRGWLQQQRARSVAFGSEENF ANYNTPQDLEQPL >gi|289656359|gb|ADEA01000008.1| GENE 8 8827 - 9294 438 155 aa, chain - ## HITS:1 COG:RSc1332 KEGG:ns NR:ns ## COG: RSc1332 COG0314 # Protein_GI_number: 17546051 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin converting factor, large subunit # Organism: Ralstonia solanacearum # 5 151 4 149 176 144 53.0 9e-35 MQTLIRIQTADFDLQEEYRGLLARSGNTGAVAAFVGLVRDRDTDVPLSSLFLEHYLEVTE NEIAGIVRTASQRWPLEACTVVHRVGELGPDEQIVLVLAAAAHRKAAFAAAEFIMDYLKT EAPFWKKETFSDGLERWVEAKQSDKEAVEKWSGTQ >gi|289656359|gb|ADEA01000008.1| GENE 9 9296 - 9544 414 82 aa, chain - ## HITS:1 COG:no KEGG:Tbd_1026 NR:ns ## KEGG: Tbd_1026 # Name: not_defined # Def: molybdopterin synthase subunit MoaD # Organism: T.denitrificans # Pathway: not_defined # 1 82 2 83 83 76 47.0 3e-13 MITILYFGVLKQRLGVAQEQVAWGGGTGRELLHLLQRRGGAWAEALEEDRIFRLAIDKQI VGWDVQIPDGAEVGLLPPVTGG >gi|289656359|gb|ADEA01000008.1| GENE 10 9761 - 11722 2817 653 aa, chain + ## HITS:1 COG:NMB1249 KEGG:ns NR:ns ## COG: NMB1249 COG3850 # Protein_GI_number: 15677120 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase, nitrate/nitrite-specific # Organism: Neisseria meningitidis MC58 # 19 645 7 583 590 604 53.0 1e-172 MIRLRIRFTDNDMKSLSFFSDGLSLSARLKLLTLLWVGSALLSVVFTLLLSWRLEGASTA INDAGSLRMQTYRLAYMVGNHATERQINNQIKEFEQSLQKVSRTDAINPLLPAQRPQAYD LIQSMLVIDWQSNILPKLQKHTLPTNIDLYRFAGNIDLFVQALENANEENTRWLRRFQMA LILMILIAAGVMIKFHYSWIIRPLESLLDGVQTIGRGGFGVAIPTGYIQEFAQVSKGFNQ MSAHLKTLYTDLEGQVARQTQDLARQNRDLEMLYQTTRDLHQTHTPTKAAEEFLSRVVPA VSASAGSIRLLDFERKRTDLVASTGLPADVQTAEQCSELEACLCGHKDKGMEGGRPSEKP SGQSACFYDARDYGNLPFVTGHPGFARVSVFPILYKSEELGILTLYFSDGIELGENDDSL LRTLCGQLGVSIANSRFAQERSQLAVLQERNLIAQGLHDSIAQTLTFLNLQVQMLDSAYK AGEKEQMEENIRFLTDGVQECYDDVRELLLNFRTKISNKDFPEAVTSLLARFEQQTQIEV DTAWRDDGPSLNNDEQLQVIFILQESLSNIRKHAQAHHVVVELDNRHDFTLRIRDDGVGF DTGRLKNMSEAHVGLGIMQERARRINAVLSVESQPHQGTTVTLVLPQHRRTAS >gi|289656359|gb|ADEA01000008.1| GENE 11 11719 - 12375 1169 218 aa, chain + ## HITS:1 COG:NMA1419 KEGG:ns NR:ns ## COG: NMA1419 COG2197 # Protein_GI_number: 15794331 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Neisseria meningitidis Z2491 # 1 215 1 215 218 337 79.0 7e-93 MSIKIILIDDHTLFRSGIKALLSRQSDFEVIGEAADGFTGIKLVEQMRPDIVLLDLDMPV MNGRETLAQILSSNPQQTVVMLTVSEDNDDLTECMRIGARGFLLKNINADFLLDSIRKAV DGDNVFSPEMTTRLVQSLISPASPRADHLLSTLTPREMEILGYLAAGHSNKVIARHLELA ESTIKVHVQNILRKLNLSSRVQAAVYAVQHKVPQPEGV >gi|289656359|gb|ADEA01000008.1| GENE 12 12492 - 13031 992 179 aa, chain - ## HITS:1 COG:NMB1064 KEGG:ns NR:ns ## COG: NMB1064 COG0494 # Protein_GI_number: 15676948 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Neisseria meningitidis MC58 # 1 176 1 176 178 277 77.0 8e-75 MDLKETKVGSEPIYEGSFVSISRDTVRLANGNESKRIVIRHPGAASVLAETENGEIVLVR QWRYAVGEAVLELPAGKLDVAGEDPAECALRELAEETPYTADSVKLLHTFYTAVGFCDEK MYLYQAQGVRLGSTLSNDEDEITETVLMNREAVKAALENDEIHDAKTLVGLQYWLMHTK >gi|289656359|gb|ADEA01000008.1| GENE 13 13083 - 13412 503 109 aa, chain - ## HITS:1 COG:NMB1063 KEGG:ns NR:ns ## COG: NMB1063 COG1539 # Protein_GI_number: 15676947 # Func_class: H Coenzyme transport and metabolism # Function: Dihydroneopterin aldolase # Organism: Neisseria meningitidis MC58 # 1 106 9 114 118 147 72.0 3e-36 MKAETLIGVYGWEREHVQTLLLDLDIGVSEKAALSDDIGETVHYGDVCEAVRASLREQDF LLLEVLAEHVADLILRDFGALWVRVRIVKPGILPDVKEVGVEIERGAPR >gi|289656359|gb|ADEA01000008.1| GENE 14 13495 - 14103 879 202 aa, chain + ## HITS:1 COG:NMA1261 KEGG:ns NR:ns ## COG: NMA1261 COG0344 # Protein_GI_number: 15794194 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis Z2491 # 1 199 1 199 200 248 78.0 4e-66 MFNLSAVIASYLIGSLSFAVIVSKCYGMADPRTYGSGNPGATNVLRSGKKKAAALTLLGD ALKGVFAVAAARLLQDNLGLSDGIIAIAAVAVLAGHMWPVFFGFKGGKGVATALGVLLAL SWPTALICAAVWLVMAFGFKVSSLAALTATVISPLIAYFFMPHGSWVAATAIIAALVLYR HKSNIENLLQGKEGKIGDKAEN >gi|289656359|gb|ADEA01000008.1| GENE 15 14215 - 15735 2052 506 aa, chain + ## HITS:1 COG:no KEGG:HD0066 NR:ns ## KEGG: HD0066 # Name: not_defined # Def: hypothetical protein # Organism: H.ducreyi # Pathway: not_defined # 13 460 14 456 457 455 51.0 1e-126 MIKKILRPYAKPALLAATAALLSACSLVRYQPIATINKIDLNSGYRFETDRQSQNNADGD DTYIVLMFSGGGTRAAALGYGVLEQLNRQKVNIGGREKTLMQNVDVVIGVSGGSVLAAYF ALHGQDTIPSFDRRFLRLNFQKLMTKQVFSFANLPRLTSPEFGRGDLLQEQFETHLFGKA TFADLEKRRKGPFAIISATDMGLGERINFTQEYFDLMCTNLGNLRIARAVAASSAVPMVF APVTLNNNGGNCNYSPPKDTAQAAVSGQNAQQNKTRQEYVTRYRRYDSKTRPYIHLLDGG LTDNLGMRSLLDMADVYSSSMLMRRMTDHNIRRVVIISVNARNRINSDIDTKAAVPGFRN VLSSIVDIPIDRYSQESLRRLRAFADKWNEDNRNADDSKKIALSFVSLSLDDLPKSELRN DVLNIPTSFYLPPDDIAKLRTAAAILMKQSPEYKKLLEDLSAKPNKAAIYQETAALPRTV SQSELDEINNPKAGADNGGNSDNDGK >gi|289656359|gb|ADEA01000008.1| GENE 16 15831 - 16670 987 279 aa, chain + ## HITS:1 COG:PM1973 KEGG:ns NR:ns ## COG: PM1973 COG2321 # Protein_GI_number: 15603838 # Func_class: R General function prediction only # Function: Predicted metalloprotease # Organism: Pasteurella multocida # 1 276 1 275 275 326 60.0 2e-89 MDWRGRPESTNVEDRRGSGSGGGKTPGIIGIIVLLVGAYYGVDLSGLVGTAGLGTGTVRQ SSLTQEEEKELAKMSKVVLADTEATWRSYFSEKLGKTYTPARMVFYTGGTHTSCGAGQAA MGPFYCPGDRSVYLDLSFYDDMRKKLGASGEAAFAYVIAHEVGHHVQNLLGILPEVNKIR QNAGQTQANALSVKLELQADCFAGVWGHYAANKKMLKTEDIQQAMTAAESVGDDRLQQNA QGYVVPDSFTHGSSADRMAWLKRGLESGDIGRCDTFTAN >gi|289656359|gb|ADEA01000008.1| GENE 17 16841 - 18223 2490 460 aa, chain + ## HITS:1 COG:NMA1001 KEGG:ns NR:ns ## COG: NMA1001 COG1109 # Protein_GI_number: 15793957 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Neisseria meningitidis Z2491 # 1 460 1 460 460 806 86.0 0 MATISREIFKAYDIRGIVGKTLTNEAAYLIGKAIAAKAAAQNIGKIALGRDGRVSGPELM EHIQRGFTDSGIDVLNVGMVATPMLYYAAINECGGSGVMITGSHNPPDYNGFKMMLGGDT LAGPVIQELLAAIEADRFTQPATKGSVTEKDISVEYRNYIVGHVKLKRPMKIIIDTGNGV GGAFAGALYRALGNEVTELFSEVDGTFPHHHPDPSKPKNLQDLIAALKNSDAEIGLAFDG DADRLGVVTKDGNIIYPDRQLMLFSQDVLSRNPGAKVIFDVKSTRLLAPWIKEHGGEPIM EKTGHSFIKSTMKKTGALIAGEMSGHVFFKERWFGFDDGMYAGARLLEILSAFDNPTEVL DNLPQSISTPELNIDLPEGSNGHQVIEELAAKAKFEGATEIITIDGLRVEFPDGFGLMRA SNTTPILVLRFEADSDEAIGRIQNQFKAVIESNPALKWPL >gi|289656359|gb|ADEA01000008.1| GENE 18 18441 - 19286 919 281 aa, chain + ## HITS:1 COG:NMA1260 KEGG:ns NR:ns ## COG: NMA1260 COG2961 # Protein_GI_number: 15794193 # Func_class: R General function prediction only # Function: Protein involved in catabolism of external DNA # Organism: Neisseria meningitidis Z2491 # 1 281 1 281 281 448 75.0 1e-126 MLSYRHAFHAGNHADILKHFILFLTLEYFNRKDKPYWYVDTHSGAGLYDLTGGEAQKVGE YRQGIGRLQQAEKLPQELSEFAGRLKTILPQDNLYCGSPWLAQAMTRSDDKLRLFELHPA DFRHLQNNMREASLGRRGQITQADGYQGLISLLPPPTRRAVVLIDPPYEEKQDYRRVVHT LKDALKRFESGCYMVWYPCLSREESRELPEQLQKLAPENHLHAQLHVCTPRADGFGMHGS GMFVINPPYLLAGQLQTNLPVLAGILAQDSGAHYVLDYRIK >gi|289656359|gb|ADEA01000008.1| GENE 19 19325 - 20413 1338 362 aa, chain + ## HITS:1 COG:VC1880 KEGG:ns NR:ns ## COG: VC1880 COG3216 # Protein_GI_number: 15641882 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Vibrio cholerae # 6 176 3 167 176 86 30.0 7e-17 MSLFKRNGLRGRLPDRAKIFASRWTKPFAPLFDKPYFWTLNRRQAAVSVAVGMFCGLMPG PTQMLSALIVAYFLRTNLPVAVFSTLYTNPFTYMPLYYTGYKIGCLILGIEAADKPVFPK LGGGQFWSETAAWLADAGKPLLVGVPVLGCILAVAGYFAVLLLWRWHTVYHWRGRKAGSR LRPLTANEIEMAKTVFSDGIDYTRVRIRRGLPLMPNMKVAVSPNGCIYFPKQSCPADFAL ADRSYRIWLIHELTHVWQYQQGFRTWLGGLALVLSGGYRKRRAYAYPPPEQITSFNDLNM EQQADLIAHYFAAKNLPGSRYCADLPKFQTALKDFLANPNQPSLLPKYRLFSKKAYAQQH RQ >gi|289656359|gb|ADEA01000008.1| GENE 20 20712 - 21275 242 187 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 3 182 480 665 904 97 36 9e-20 MPWNIPIFLTWMRVLLIPAFTALFYLPDAWIHPQTVNWTAAFIFAAAAVTDWFDGFLARL WKQTSDFGAFLDPVADKLMVAVALLLLVDIERTNVIFAIIIIGREITISALREWMAQMGK RNSVAVATIGKFKTTAQMLAILLLLAGMKDFYGFNLILIGNILMLIASVLTIWSMFYYLK MAWKEFK >gi|289656359|gb|ADEA01000008.1| GENE 21 22110 - 23180 412 356 aa, chain - ## HITS:1 COG:intD KEGG:ns NR:ns ## COG: intD COG0582 # Protein_GI_number: 16128520 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Escherichia coli K12 # 1 326 1 367 387 268 40.0 2e-71 MPIYLRNDVYYVDIRTKGGRRIRQSAGTKNKHEAQRLHDKLKYELWQHEHFDEKPKRVWE EAAVRWIKEKSEKKSIRDDISRLRMLPQLRGVFLHHISRDFIMDVVDRLPCSNSTKNRYL ALIRSILYKAQNEWGWIDNAPKLKLKKEAAKRIRWLKPEEAERLINALPDNHWRAIAIFS FCTGLRQRNVFGLRWEQVDLDRKTAWIYPDETKSGRPIGVPLNDVAVRVLSERMGIHETY VFTNRENKPVSALSSKMWKRTLERAGISNFRWHDIRHTWASWLVQRGVPLVALKEMGGWE RLDMVMRYAHLATDHLMTHAAVLDNLESFGHKMDTGFLGQQEGQRFYQSEGGSKRC >gi|289656359|gb|ADEA01000008.1| GENE 22 23057 - 23440 130 127 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|255067354|ref|ZP_05319209.1| ## NR: gi|255067354|ref|ZP_05319209.1| toxin-antitoxin system, antitoxin component, Xre family [Neisseria sicca ATCC 29256] # 25 127 1 103 103 135 76.0 7e-31 MADGKGTIQSIRSDAGGRMSKTYTVEEAAAYCKCHAETVRQYIRDGAIVASRPGRRYCIT QAALDVFLAKKENEQVQASLEHRSEEKCRSTYETTSTTSISGRKAAAELDSLLAPKTNMR RNGCTIN >gi|289656359|gb|ADEA01000008.1| GENE 23 23383 - 23646 243 87 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298369051|ref|ZP_06980369.1| ## NR: gi|298369051|ref|ZP_06980369.1| hypothetical protein HMPREF9016_00720 [Neisseria sp. oral taxon 014 str. F0314] # 1 87 1 87 87 162 100.0 8e-39 MLIDKVEPIATVKVHTAFSPAAEDYPHYRLIPVQTEAGNDMCLLFYIDSERYLLLEPRIR RYLAVKKLAWLTEKAPFKVFEVMREAE >gi|289656359|gb|ADEA01000008.1| GENE 24 23636 - 23869 170 77 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298369052|ref|ZP_06980370.1| ## NR: gi|298369052|ref|ZP_06980370.1| hypothetical protein HMPREF9016_00721 [Neisseria sp. oral taxon 014 str. F0314] # 1 77 1 77 77 148 100.0 9e-35 MDEKHYEAMLSKPPEGIGGWPLFLIVEFKEAVYEANIALSRSRLAKGWRQTFAQKAEKVC GFYRLRDEIEERRHHAD >gi|289656359|gb|ADEA01000008.1| GENE 25 24030 - 24161 70 43 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQAMMNSMIGVNGLMIRMSKTHKINEYIRPMATAINERITFLL >gi|289656359|gb|ADEA01000008.1| GENE 26 24158 - 24604 585 148 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298369053|ref|ZP_06980371.1| ## NR: gi|298369053|ref|ZP_06980371.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 148 5 152 152 213 100.0 2e-54 MENKAAEIVAEVFRHSGTRLTEDDPIVVMLMMQDQSFRQAFDAFAEQQTEERLAFLEELS VREGNITEAAAKLEKYREQLLAELAQYANGQLAEAESKIYGAVYQRIARDVEVSNERLVK RLEKLLVIALITALVVLLLAVLLVWGGR >gi|289656359|gb|ADEA01000008.1| GENE 27 24594 - 25196 593 200 aa, chain - ## HITS:1 COG:no KEGG:Veis_5052 NR:ns ## KEGG: Veis_5052 # Name: not_defined # Def: transfer origin protein, TraL # Organism: V.eiseniae # Pathway: not_defined # 9 186 70 248 250 150 39.0 2e-35 MSVQVINILTRDNNVDIRNFDGLIEQFLEKDGIGIVDTGSNTFIPLMSYIAENNIAELLR ESGVRLILHVPIEGGQAQIDCIESLGRILNDVDAEVVVWLNEFHGAVENGGKLFEQFGVY QKHKDRIIGIVRLEKRNPDTYGKDIEQMTKLHLTFDEVDHTAEMTFMPKQRLRNVKRDIF AKLASLPVAANALDGTGDGK >gi|289656359|gb|ADEA01000008.1| GENE 28 25211 - 25363 71 50 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|255067358|ref|ZP_05319213.1| ## NR: gi|255067358|ref|ZP_05319213.1| protein TraL [Neisseria sicca ATCC 29256] # 1 49 55 103 308 87 79.0 3e-16 MKEVNLVVQSKGGCGKTFCCASYAQYVAARAANQVEVHCIVTILTRATVR >gi|289656359|gb|ADEA01000008.1| GENE 29 25589 - 25879 190 96 aa, chain - ## HITS:1 COG:no KEGG:D11S_2296 NR:ns ## KEGG: D11S_2296 # Name: not_defined # Def: TrbM mating pair formation protein-like protein # Organism: A.actinomycetemcomitans # Pathway: not_defined # 1 84 1 86 189 90 52.0 2e-17 MKKSLLAAVSAAVLFVSMPVQAEELTGDAKLACEAILCLSTSTRPTECNESLRRYFSIKH KKAHKTARARRDFLKQCPRDQGGDAAVERLVERRMP >gi|289656359|gb|ADEA01000008.1| GENE 30 26000 - 26191 249 63 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298369056|ref|ZP_06980374.1| ## NR: gi|298369056|ref|ZP_06980374.1| hypothetical protein HMPREF9016_00725 [Neisseria sp. oral taxon 014 str. F0314] # 1 63 1 63 63 103 100.0 5e-21 MKLTKGSNMKKIRKPVKQIVIGTYQSIKAASKQVDLLMRGNGDLCVNIVQDGRKYQVRTV VWQ >gi|289656359|gb|ADEA01000008.1| GENE 31 26227 - 26469 349 80 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298369057|ref|ZP_06980375.1| ## NR: gi|298369057|ref|ZP_06980375.1| hypothetical protein HMPREF9016_00726 [Neisseria sp. oral taxon 014 str. F0314] # 1 80 3 82 82 138 100.0 9e-32 MALTEMTRDEAVRYIERVLKDVRNVVDGNYDDIRYYPGSWGDFRYLQGYAEATVRAFVLL LTDEEYRRYISEARYPSKDF >gi|289656359|gb|ADEA01000008.1| GENE 32 26667 - 26996 310 109 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298369058|ref|ZP_06980376.1| ## NR: gi|298369058|ref|ZP_06980376.1| hypothetical protein HMPREF9016_00727 [Neisseria sp. oral taxon 014 str. F0314] # 1 109 1 109 109 217 100.0 2e-55 MNIEPDHNEKLRTLYILLVQEAFTAIRNLSGKHSGCLSPEDAVRHLDLAGQLAETLHNLP ERVNDKSGIAYTQRSMERFVLSYPCFSEQYRFSEYLDKIRKLIPDIDDQ >gi|289656359|gb|ADEA01000008.1| GENE 33 28540 - 28761 311 73 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298369059|ref|ZP_06980377.1| ## NR: gi|298369059|ref|ZP_06980377.1| hypothetical protein HMPREF9016_00728 [Neisseria sp. oral taxon 014 str. F0314] # 1 73 1 73 73 115 100.0 7e-25 MKNSPFKKIDWWEITDKSFVISIDDSYVIDIKELDDRTVVALPEQLPELVLNRDIVNDNL AEEILLSLKKRQK >gi|289656359|gb|ADEA01000008.1| GENE 34 28777 - 29445 -24 222 aa, chain - ## HITS:1 COG:no KEGG:PLES_13381 NR:ns ## KEGG: PLES_13381 # Name: not_defined # Def: hypothetical protein # Organism: P.aeruginosa_LESB58 # Pathway: not_defined # 1 196 2 221 251 73 27.0 6e-12 MDTREIRRNNLRELAEKYGGQKALADAADLAPNQLNHIIGPNPIRNVGEQLARKIESQLG LNKGYLDSIHSKENKAGILVTTESIYIPHVNIEITNSELGYILKKEGDGLFKKEWAKERG VDPAQVFQFKMSYDNMSPTILENDFLIIDSSRIDVCDSKVYLVILNGVVHVKRVFYLLSN EVCISNDSNNKMLYPDIVTNVSNISQLRIIGQVIAIQRNLPL >gi|289656359|gb|ADEA01000008.1| GENE 35 29556 - 29768 161 70 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNLSDFFEKMPRGYRFILAKQIGCSPAYLSHIATGFRKASPKMAVAIEKATNNEVSRYDL RDDADEIWGA >gi|289656359|gb|ADEA01000008.1| GENE 36 29781 - 30548 559 255 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298369061|ref|ZP_06980379.1| ## NR: gi|298369061|ref|ZP_06980379.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 255 1 255 255 451 100.0 1e-125 MLIADLRHHLTTDFVVFHELGALCGQNLQANSLISSLFWWTQVSEQKSPEKHGWIYKTAK HLKEELGLTRRGYEKARKLLLDLGIIQYKRAGVFGTMHWQINKQKILELAYRVRGEELPA DSPSHYWFDIHNFRLEKWVPIDLWNAFIKMRAEKKNKVPTIEQKKAYLRQLKEMRRKKID IRAVMEKSIAGGWAGFFPPVGTQAVPQQDQAREEQRIKEELQQQQAEREKPPPDKSPPDS EARQQALRNSGIRKQ >gi|289656359|gb|ADEA01000008.1| GENE 37 31042 - 31329 379 95 aa, chain + ## HITS:1 COG:XF2075 KEGG:ns NR:ns ## COG: XF2075 COG3905 # Protein_GI_number: 15838666 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Xylella fastidiosa 9a5c # 9 94 6 91 92 62 36.0 3e-10 MKSATVPVAVKLPIEVRDRLKAVAENQDRSMHWLMREAVNQFLEREEAKASLRAAADASW QHYQETGLHVTLEETNAWMEKLIEGEDVGELKCHE >gi|289656359|gb|ADEA01000008.1| GENE 38 31356 - 31610 98 84 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAKRTIPHLPLMFHRYDNDGFQLDPIENRIAPIPKRNSPFTIYIVKKPPACRKLGQRIKR FPYAFQRLLSGLPVVFGQKIINPP >gi|289656359|gb|ADEA01000008.1| GENE 39 31689 - 31925 287 78 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298369065|ref|ZP_06980383.1| ## NR: gi|298369065|ref|ZP_06980383.1| hypothetical protein HMPREF9016_00734 [Neisseria sp. oral taxon 014 str. F0314] # 1 53 1 53 78 93 100.0 3e-18 MHLAHSLAQAERGEFVEVGFDGGGKVAEHKSFKDFAGCLGNPYNIHLLIEEMNEAIAEAG AGAGAGAGAGAGAEAGGK >gi|289656359|gb|ADEA01000008.1| GENE 40 31973 - 32380 262 135 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298369066|ref|ZP_06980384.1| ## NR: gi|298369066|ref|ZP_06980384.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 135 1 135 135 236 100.0 2e-61 MKYLGVSMKISVEEFMRQEAGAGKKSRLDPYEHEILTLKSNGYSYEQIIKFLSQNDIEIS KTALHHFVKSRNADKPAAVSEIRNQPANDSVQTENRQTDTVAPAVPSKKQTEPEKTRPII GKFDLNREINVEELM >gi|289656359|gb|ADEA01000008.1| GENE 41 32942 - 33340 526 132 aa, chain + ## HITS:1 COG:no KEGG:Smlt3084 NR:ns ## KEGG: Smlt3084 # Name: not_defined # Def: hypothetical protein # Organism: S.maltophilia # Pathway: not_defined # 1 132 1 117 117 85 43.0 6e-16 MGLDMYGYTMRAEFAGDRQTDVMPRTDEEREQAQLTDIAYWRKFNHLHGWMEKLYREKGG EDEFNCRTVRLESEDLERLEQALEKDELEYTPGFFFGGAEIYPEDIETTRAFIQNARAAL NQGLAVFYDSWW >gi|289656359|gb|ADEA01000008.1| GENE 42 33403 - 34155 422 250 aa, chain + ## HITS:1 COG:no KEGG:Rmet_6243 NR:ns ## KEGG: Rmet_6243 # Name: not_defined # Def: hypothetical protein # Organism: R.metallidurans # Pathway: not_defined # 5 225 17 241 297 155 36.0 9e-37 MQNEHKDIIGLFQSFHSGYRLSEVFGDFIEVATIALINRFTFDGDWEQREERYHEIRKKY TEAEFGKMPEILAKLVEKFIKAGQSGTYEDILGEIYMLLDLGSQSKNQYFTPFYICRMMA QIVGEGLADKLEGNPFVSIMEPSCGSGANIIAFAETIRLKGFDHLQKMAAVAIDIDICCA RMCFIQCELLGIPAKIIHGNALTGELWTAFRTSHWLYGDFEQMMRADIKRQETDPSPSSP MPLEEQLVLF >gi|289656359|gb|ADEA01000008.1| GENE 43 34203 - 34673 333 156 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298369069|ref|ZP_06980387.1| ## NR: gi|298369069|ref|ZP_06980387.1| hypothetical protein HMPREF9016_00738 [Neisseria sp. oral taxon 014 str. F0314] # 1 156 1 156 156 300 100.0 3e-80 MNYYFRYGLHSGREMVCVLDEDKLKAMWSDEYADRNVYRDLSVTFDVDRYIRLHGILKTL EQQDRNFGKLEMSAVVDSESASDTHKIRGNSIGIYWKGIWEMAVKWWDDWSQSDFGIDLI FPPEFYADPAAWIEHEIAVKGIKSDITVDEKGDGNE >gi|289656359|gb|ADEA01000008.1| GENE 44 34666 - 35214 411 182 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298369070|ref|ZP_06980388.1| ## NR: gi|298369070|ref|ZP_06980388.1| hypothetical protein HMPREF9016_00739 [Neisseria sp. oral taxon 014 str. F0314] # 1 182 7 188 188 364 100.0 1e-99 MNKRSGRTGRIVSLIEKLTSKEIREIFMTLWRDVYSLNDGLTVDDCIEIFSSALKGSSDF TYDLLAQTCADYDVGTMTETFALLPREIYDKKFFECMKGKILPETRLDTEALVNLMMLGN VSNVEVNIRKGCIRATHFMGSDKKYLYDSGIDDEEIQWDIDDFKAQYPETWWTVEQIIYS PS >gi|289656359|gb|ADEA01000008.1| GENE 45 35541 - 36080 208 179 aa, chain + ## HITS:1 COG:no KEGG:NMO_0784 NR:ns ## KEGG: NMO_0784 # Name: not_defined # Def: putative phage associated protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 1 176 1 172 174 207 59.0 9e-53 MLLLRREYIHRMFHMIIDNRRFDTPWSISNYDGGMNFLGTLGEVPVHQISDRSATLCFEW KGEVSIPRSTYDIADMKPNVLYDFNGSGQHFDNPDPRYLLPIGSTGLILKHVVIDDEDEL LRIWCLRRNIYRRKYRLLKNIPILRDVLLHRAWQEIYRINEECRKNTFVISICHRPHEI >gi|289656359|gb|ADEA01000008.1| GENE 46 36495 - 36704 81 69 aa, chain - ## HITS:1 COG:no KEGG:AOLE_15080 NR:ns ## KEGG: AOLE_15080 # Name: not_defined # Def: putative C-5 cytosine-specific DNA methylase # Organism: Acinetobacter_DR1 # Pathway: Cysteine and methionine metabolism [PATH:acd00270]; Metabolic pathways [PATH:acd01100] # 1 55 487 541 553 86 70.0 3e-16 MRMLLPKELYKAQGFPDDYIFDRDQADRPLTKTAQVRMCGNSVSPPPMAALIRANYYPEA IRSRACEAA >gi|289656359|gb|ADEA01000008.1| GENE 47 36763 - 39801 1111 1012 aa, chain - ## HITS:1 COG:TM1193 KEGG:ns NR:ns ## COG: TM1193 COG3250 # Protein_GI_number: 15643949 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase/beta-glucuronidase # Organism: Thermotoga maritima # 7 999 8 972 1087 527 32.0 1e-149 MLLANYYQDPTITRINALPHHSYFIPFDKKDKVDQFSRENSSFFTSLNGEWQFAYYSSMQ DLPENLSEIAFTKQINVPSNWQNHGFDTHQYTNINYPFPFDPPFVPLENPCGVYQKQVNL NKNANKHYLLTFEGVDSCFYVYVNHKFVGYGSISHSTNEFDITDYLHHGENTLTIFVLKW CSGSYLEDQDKFRMSGIFRDVYLLEREHNYLQDLHIKTVLSEDLSLGQIYLDLNFVKCAD NIRVTLFDTTEQIVQTNCAITTDKKRMQIRLDNIPLAKAQLWNAENPALYTLVLHTEEEI ITQKIGFRKVEIRNGVLLLNQQPIKFKGVNRHDSDPKTGYAISVAQAMTDLSLMKKHNIN AIRTAHYPNSPWFCELCDRYGFYVISESDIESHGASFQAISQPEPSIFLNVENPNEEQRI RQQTIDNFCYFAQEPLYQTALLERTKANVERDKNRSSILIWSLGNESGYGKNFEYCAKWV KERDPDRLVHYESSIYQHSGYKNNTEHLDLYSEMYSDTEVIDTYFSDNSQTKKPFLLCEY SHAMGNSNGDMEDYFQTFNKYPGCCGGFIWEWCDHAPFITSTKLGYGGDFGEKIHDENFC VDGLVSPERIPHSNLLEVKNVNRPVRATLHIDKVELYNYFDFTNLKDIVQIKYEWVKNGQ ITETGTLVVDCEAHHSRSLPIQLPKERKGLLWLNLYYCSSKQTDLLPVGHQLGFDQIILS KEYTPTIGLDKGNHPPLEITETVKQVIIQNSQYYFEFNKVTGIIEEIKVNGKAIIHKPLA WNIWRAPTDNDRLIRSQWQNAGYDQMYSKVYDICACQQGNGVVVSVKSALVANAKSKIMT LETQYLLSENGKLDIKTDAVFHEHLPFLPRFGLRFFLDKQKTSFTYLGYGATESYIDKHQ ATQFGVYSTTAEENHVNYLKPQENGSHYGCFYIKNDLIQVESEQPFSFNLSPYTQEELTQ KKHSYELARSGYDVLCIDYKMSGIGSNSCGPNLKPQYRLSENNINFIISIQL >gi|289656359|gb|ADEA01000008.1| GENE 48 39819 - 41075 208 418 aa, chain - ## HITS:1 COG:lacY KEGG:ns NR:ns ## COG: lacY COG0477 # Protein_GI_number: 16128328 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 11 408 3 400 417 413 57.0 1e-115 MSNQTSSKSQYLANSNYWIFSAYFFAFFFIMATCYPFLGIWLGDIHGLKGEKIGYVFSSI SLFALLFQPILGFFSDKLGIRKHLLWILAILLLFYAPFFIYVFAPLLKTNLWLGVISGGA YMGFVFQAGAPASEAYIERISRLNGFEYGRTRLFGMLGWAICASIAGNLYSSQPNAVFWL GSGTAIVLLVLIFLAKTDSNNTDQIEDNLEVNHSPITLKQALKLFSLPRFWALLTYIVGV ACIYDIFDQQFGNFFNTFFESKEQGMKFFGYVTTGGELLNAIIMFFVPLLINRIGAKNAL LIAGSIMSIRIMGSSFATETWHVIVLKTLHMFEVPFYLVGVFKYIADVFEVRFSATIYLV CCNFSKQIGNMILSPAIGTLYDMYGFRSTYFILGCIAFVFTLISVFTLVNTKKLMNNA >gi|289656359|gb|ADEA01000008.1| GENE 49 42067 - 42630 963 187 aa, chain - ## HITS:1 COG:STM0291 KEGG:ns NR:ns ## COG: STM0291 COG3209 # Protein_GI_number: 16763674 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Salmonella typhimurium LT2 # 1 175 752 921 1364 75 34.0 4e-14 AADNLIRESGWDGRITEYGYDKAGQLNEQREYGDNPARPLQIHRFERDILGRLTDKISRR TDRNRHTEAYSRSRYDYDPVSGRLSKARNGSGSVELEYDALGRITGETVVHNGREIKVGY RYDGNGNRIRTELPDGSVVDHLYYGSGHLHRISCNGETVSDIERDALHRETSRTQVLKMQ INVKRYK Prediction of potential genes in microbial genomes Time: Thu May 26 13:17:15 2011 Seq name: gi|289656358|gb|ADEA01000009.1| Neisseria sp. oral taxon 014 str. F0314 cont1.9, whole genome shotgun sequence Length of sequence - 5293 bp Number of predicted genes - 6, with homology - 5 Number of transcription units - 5, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 505 803 ## COG3209 Rhs family protein - Prom 539 - 598 2.8 - Term 519 - 569 16.1 2 2 Op 1 . - CDS 806 - 1270 373 ## 3 2 Op 2 . - CDS 1267 - 1956 576 ## COG3209 Rhs family protein 4 3 Tu 1 . - CDS 2087 - 2482 422 ## NT05HA_0259 rhs family protein - Prom 2680 - 2739 2.7 - Term 2541 - 2574 -0.5 5 4 Tu 1 . - CDS 2742 - 3254 268 ## AOLE_12320 hypothetical protein 6 5 Tu 1 . - CDS 3309 - 4787 1625 ## COG3209 Rhs family protein Predicted protein(s) >gi|289656358|gb|ADEA01000009.1| GENE 1 1 - 505 803 168 aa, chain - ## HITS:1 COG:PA2684 KEGG:ns NR:ns ## COG: PA2684 COG3209 # Protein_GI_number: 15597880 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Pseudomonas aeruginosa # 24 168 267 414 1317 89 36.0 2e-18 MFRGEDGNLYVNRLGAASLAGREMVRYHYDGRGDLTAVYGRGGKKLRGFAYRNHIMIEHS QPEGLVSRYRYDTYDTGGKVLCNTTNTGEEWTFDYREDHTLVTDVLGRCETFGFDGNYEL SYYIDAEGNRSDTERDDDGWITGQTDPLGRETRYGYNRYGQLESTDYP >gi|289656358|gb|ADEA01000009.1| GENE 2 806 - 1270 373 154 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIEPLERKSLLSPFAINGDEMVAEAYSKIMYQHWNISAKFDKYFPRGTYGEDLDLILFEF FVLGDTDWFSAPKEICLGRYSRKNKDFSVKVPVPKEVSSAVLNGNDEIVNDFLVNTFSTA KELIFSKKSFRKLDFNFEKFESDYNSFMNDLVSK >gi|289656358|gb|ADEA01000009.1| GENE 3 1267 - 1956 576 229 aa, chain - ## HITS:1 COG:YPO0762 KEGG:ns NR:ns ## COG: YPO0762 COG3209 # Protein_GI_number: 16121077 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Yersinia pestis # 1 110 1283 1389 1438 100 46.0 2e-21 MTDQFGNLLWYGEYTAWGRLKKDGRVYQNAHQPFRLQNQYYDRETGLHYNLMRYYEPDTG RFVNQDPIGLWGGDNLYLFGRQAFDFIDPLGLKIYGHRKDGTFRKKPGPKPKKQPSMHGN SKDSPAITYLYKLVNPDGSLSKWGITSESNPLSRYTKAELGDRSMIVLAQGSRSDMLDLE RALTSRFGGPENKESWANTVRNLTDPDAIMDSFMSLGRCGVKDLRKKKK >gi|289656358|gb|ADEA01000009.1| GENE 4 2087 - 2482 422 131 aa, chain - ## HITS:1 COG:no KEGG:NT05HA_0259 NR:ns ## KEGG: NT05HA_0259 # Name: not_defined # Def: rhs family protein # Organism: A.aphrophilus # Pathway: not_defined # 37 129 1540 1628 1917 71 39.0 1e-11 MIRGNILSANHPAATSAGRLKSQPPKTPSNPNLYAGNRLKEHDGTEYTYDGLGNLIYRQL PDGENQYFQYDSENQLVRAEIKKAAGNTEIWEYAYDPFGRRLSKERKDKLAWTSTEPKRI HFVWDGSRLAL >gi|289656358|gb|ADEA01000009.1| GENE 5 2742 - 3254 268 170 aa, chain - ## HITS:1 COG:no KEGG:AOLE_12320 NR:ns ## KEGG: AOLE_12320 # Name: not_defined # Def: hypothetical protein # Organism: Acinetobacter_DR1 # Pathway: not_defined # 4 170 5 172 172 147 48.0 1e-34 MFNLKSEKEIFSNFENRKNIITNLEKLPKSSELYLSFLTKFKGIEIIPDIVIYGYEDSLN ENRYLEKNYSECSSIFWIIGYSGQGDSWFISKSDDSIFFYDHNLGEYQIDYFMNLGINFL EFLKLAFLYRDLETYLDLNDNIDEISQRKFKDAVNLIHDDLFSSYPYAYF >gi|289656358|gb|ADEA01000009.1| GENE 6 3309 - 4787 1625 492 aa, chain - ## HITS:1 COG:YPO3609 KEGG:ns NR:ns ## COG: YPO3609 COG3209 # Protein_GI_number: 16123751 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Yersinia pestis # 23 345 10 328 456 194 36.0 5e-49 MGRLKRQQTHALGEGGKQDVQVGAVSRRYAYDRAGNLIRSEDRRGGTLEYVYDKLGRIRE VKHSGGGVERFAFDPAGNILSANHPAATSAGRLKSQPQKTPSNPNLYAGNRLKEHDGTEY TYDGLGNLIYRQLPDGENQYFQYDSENQLVRAEIKKAAGNTEIWEYAYDPFGRRLSKERK DKLAWTSTEPKRIHFVWDGSRLAQEYTYKGTYTYIYTDQDSYEPLAQIFHNNKDGKQYLA YIHTDQIGIPREMTDQFGNLLWYGEYTAWGRLKKDGRVYQNAHQPFRLQNQYYDRETGLH YNLMRYYEPDTGRFVNQDPIGLLGGDNLYQFAPNGIMWLDPLGLARKKKTPTRTLQKRWA SYVGARHTNRDIHHGFPEEFADRFKAIADIDVNDPQYYYNLPPKKHTVKPGIHTNSSRMG KNWNKAWAGILDQVEEMNLSQADAKVFLEKRLREMARKEGIGKYNAKAVKGMRRSIFSRL LNSIVKVFPGKC Prediction of potential genes in microbial genomes Time: Thu May 26 13:17:35 2011 Seq name: gi|289656357|gb|ADEA01000010.1| Neisseria sp. oral taxon 014 str. F0314 cont1.10, whole genome shotgun sequence Length of sequence - 25294 bp Number of predicted genes - 18, with homology - 18 Number of transcription units - 6, operones - 3 average op.length - 5.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 1579 1810 ## COG3209 Rhs family protein - Prom 1728 - 1787 7.1 + Prom 1673 - 1732 5.5 2 2 Op 1 . + CDS 1761 - 2318 112 ## gi|255068371|ref|ZP_05320226.1| type VI secretion-associated protein, BMA_A0400 family 3 2 Op 2 3/0.000 + CDS 2326 - 3396 662 ## COG3515 Uncharacterized protein conserved in bacteria 4 2 Op 3 6/0.000 + CDS 3463 - 3981 318 ## COG3516 Uncharacterized protein conserved in bacteria 5 2 Op 4 4/0.000 + CDS 4014 - 5513 635 ## COG3517 Uncharacterized protein conserved in bacteria 6 2 Op 5 1/0.000 + CDS 5590 - 6072 555 ## COG3157 Hemolysin-coregulated protein (uncharacterized) + Term 6098 - 6140 8.0 + Prom 6083 - 6142 3.2 7 3 Op 1 3/0.000 + CDS 6188 - 6991 272 ## COG4455 Protein of avirulence locus involved in temperature-dependent protein secretion + Prom 7040 - 7099 1.5 8 3 Op 2 8/0.000 + CDS 7184 - 7537 269 ## COG3518 Uncharacterized protein conserved in bacteria 9 3 Op 3 9/0.000 + CDS 7515 - 9503 401 ## COG3519 Uncharacterized protein conserved in bacteria 10 3 Op 4 3/0.000 + CDS 9500 - 10546 109 ## COG3520 Uncharacterized protein conserved in bacteria + Prom 10558 - 10617 7.9 11 3 Op 5 . + CDS 10643 - 13273 1220 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 12 4 Tu 1 . - CDS 13351 - 14289 254 ## COG5351 Uncharacterized protein conserved in bacteria - Prom 14376 - 14435 5.8 13 5 Op 1 1/0.000 - CDS 14506 - 16782 313 ## COG3501 Uncharacterized protein conserved in bacteria 14 5 Op 2 3/0.000 - CDS 16836 - 20384 1660 ## COG3523 Uncharacterized protein conserved in bacteria 15 5 Op 3 8/0.000 - CDS 20458 - 21711 217 ## COG3455 Uncharacterized protein conserved in bacteria 16 5 Op 4 8/0.000 - CDS 21731 - 23077 499 ## COG3522 Uncharacterized protein conserved in bacteria 17 5 Op 5 . - CDS 23107 - 23577 229 ## COG3521 Uncharacterized protein conserved in bacteria - Prom 23796 - 23855 8.1 + Prom 23777 - 23836 11.2 18 6 Tu 1 . + CDS 24048 - 25293 1525 ## COG3209 Rhs family protein Predicted protein(s) >gi|289656357|gb|ADEA01000010.1| GENE 1 1 - 1579 1810 526 aa, chain - ## HITS:1 COG:PA2684 KEGG:ns NR:ns ## COG: PA2684 COG3209 # Protein_GI_number: 15597880 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Pseudomonas aeruginosa # 145 519 46 414 1317 138 31.0 2e-32 MSKFGNTIGILVPQPGAPGPVSTLSANPPEPLQTKTGPIEKIEMVTDVASDAISLVAPDS AAEGAADAVSLALSLAAMVPGKPGPIPPAHTGSLKLSGGGIGMGFDGGFVDRGRGSGSGR ASKKPKGRANEKKECKTCKNGSSKGKPVNPVLGIKILPQETDFTLDSLLPLVWRRSYYSD QYGNGWLGQGWSLPFSMRLERTADGFLYIDEQGREIQLPDADGFDDGGEGEEDDGVFAVG ADEEDADPYGLAGCWFDPSEQIFFGRVSDGLYQIAAPDGSAKLYFSAVAGHSLYPLVAIL DRNGNHTRIVYGDNGLPQEVIDAAGRRVTLNFVSIRLDEAADDFDPASEDGVFRGEDGNL YVNRLGAASLAGREMVRYHYDGRGDLTAVYGRGGKKLRGFAYRNHIMIEHSQPEGLVSRY RYDTYDTGGKVLCNTTNTGEEWTFDYREDHTLVTDVLGRCETFGFDGNYELSYYIDAEGN RSDTERDDDGWITGQTDPLGRETRYGYNRYGQLESTDYPDGSCDEM >gi|289656357|gb|ADEA01000010.1| GENE 2 1761 - 2318 112 185 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|255068371|ref|ZP_05320226.1| ## NR: gi|255068371|ref|ZP_05320226.1| type VI secretion-associated protein, BMA_A0400 family [Neisseria sicca ATCC 29256] # 1 185 1 182 182 166 48.0 4e-40 MSTEEICFFGKLNQSRDFVASNNLQENDKKFWDSWFGRCSGQNRLIPFVKIKISRPRLWL FYVRLPTAVYTGLGAYSTDLSGRSYPFVLFSHHLTSSEPEDLKRQLQLFGANLGTFRNIL NNGKCLPENYFNLNNDLQDFSLPAVLPQNKLLENGIGGFWLECESGYCLEYEGLPTCSLF NKLFG >gi|289656357|gb|ADEA01000010.1| GENE 3 2326 - 3396 662 356 aa, chain + ## HITS:1 COG:PA0082 KEGG:ns NR:ns ## COG: PA0082 COG3515 # Protein_GI_number: 15595280 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 11 131 11 130 344 90 42.0 4e-18 MKMFSKWELPVSKDTPAGVDIEYDSRFLELQSVAEGKPEQQYGETIIPAQEPDWAVVEKL CNQLLAESKDLRVLVYYAQALTAKYGLPGFQAGCEAIKINVDLFWDTLFPQLEDEDGEYD PFYRINALSSFSTFDGIAKELLASKLLVNGLTQALVTVKEAVAVLMGNDQQSYPGGKDRL MLDIRVGFDTAKPELVAVNQALADLKTIQDIFSTKLKDEHPLNFEAVLKPLSLINDAADY GSAGNTPQSSENSDTEDPSSPRQEAAQSSMSNEQFYADAWRRLNISNRSDVDLALEKICV YFENFEPSHPAPLFIRRVQRLMNMDFYDIMKDISPESISNLEVLIGKPEDEGTSNE >gi|289656357|gb|ADEA01000010.1| GENE 4 3463 - 3981 318 172 aa, chain + ## HITS:1 COG:PA0083 KEGG:ns NR:ns ## COG: PA0083 COG3516 # Protein_GI_number: 15595281 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 6 172 5 171 172 228 70.0 6e-60 MSQNKSSGQKFIARNRAPRVQIEYDVELYGSEKKIELPFIMGVMADLVGKPVEPLPELAE RKFLEIDVDNFNDRMKALKPRLAFNVKNTLTGEGNLSVELEFESMDDFSPAAVAKKVEPL NELLQARTELSNLLSYMDGKTGAEELIGKVLGDSELLKSLAATPRASQEDKQ >gi|289656357|gb|ADEA01000010.1| GENE 5 4014 - 5513 635 499 aa, chain + ## HITS:1 COG:YPO2938 KEGG:ns NR:ns ## COG: YPO2938 COG3517 # Protein_GI_number: 16123123 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 6 497 1 497 500 793 74.0 0 MAEKQLETQRSSSAQTVFAEGEFEKLLQKEFKPRTEEAKSAVTNAVATLAQQALQNVVTI SDDTYQTIEAIIAELDRKLSEQINLILHHEEFQKLEGAWRGLHHLVTNTETDTLLKIKVL PISKKEVARNLKRFKGTAWDQSPLFKRIYEEEYGQFGGEPFGCLVGDYYFDHSAPDVEML NSMEKIAAAAHCPFIAGASPRLMQMESWQELANPRDLSKIFQNAEYAPWRSLRESEDSRY IGLALPRFLSRLPYGATTNPVDEFDFEEETEGADHNKYTWANAAYAMAVNINRSFKYYGW CTSIRGVESGGIVENLPCHTFPTDDGGVDMKCPTEIAISDRREAELATLGFMPLVHRKNT DLAAFIGAQSLHKPAEYYDPDATANARLSARLPYLFACCRFAHYLKCIVRDKIGSFRERE DMERWLNEWIMNYVDGDPVNSTQETKARKPLAAAEVVVEEVEDNPGYYTSKFFLRPHYQL EGLTVSLRLVSKLPSAKKE >gi|289656357|gb|ADEA01000010.1| GENE 6 5590 - 6072 555 160 aa, chain + ## HITS:1 COG:STM0276 KEGG:ns NR:ns ## COG: STM0276 COG3157 # Protein_GI_number: 16763659 # Func_class: S Function unknown # Function: Hemolysin-coregulated protein (uncharacterized) # Organism: Salmonella typhimurium LT2 # 1 158 1 159 161 102 34.0 3e-22 MAIDMFMKVEGVNGEAKDANHKDWTDIESFDWGAEQPGAMTSGGGGGAGKVNFNDLTVIA AIDKAAPTILKNCATGQHLSKVEISVCKAGGNQIEYSRTTLEDVLVTGVKFIGVQDNDSL KMRYTFQAAKVKNQYWEQTDKGSKGAEVQMAFNIKENKSA >gi|289656357|gb|ADEA01000010.1| GENE 7 6188 - 6991 272 267 aa, chain + ## HITS:1 COG:STM0270 KEGG:ns NR:ns ## COG: STM0270 COG4455 # Protein_GI_number: 16763652 # Func_class: R General function prediction only # Function: Protein of avirulence locus involved in temperature-dependent protein secretion # Organism: Salmonella typhimurium LT2 # 10 265 27 266 274 95 27.0 8e-20 MDLQTKLSDATEAVRENPNNSEYRLALIQYFCMCAKWDSALKQIGQFQKLFPSVQKHLIF YLIENIEAEIRRSAVLSTQQKPKTFESHTRNLEILQNQLSIAAYASDNKNGRLSNQYNEL ADNVTETPVKISYFLSDKSEADTSGNWIIDGDVRTAFVYEFFFQGQYYWQTWNSIKGIFF KQPTSLLDIIWRPMEIRLTNGEEIQGVCPARYTVSTEEKWSDTLLSCAETDWSEVSNDLF IGRGQKMFYTDKGDFGILDIQSIKFEV >gi|289656357|gb|ADEA01000010.1| GENE 8 7184 - 7537 269 117 aa, chain + ## HITS:1 COG:STM0269 KEGG:ns NR:ns ## COG: STM0269 COG3518 # Protein_GI_number: 16763651 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 16 103 71 157 164 78 42.0 3e-15 MQTSMMNTDLSANVRSSTLNYGIPPISGINFSDIEWEDIEQYIKQAIIDFEPRLDRHSLQ VIIHTENKDNNVSYNKFIIEIKGNLKLNPYPKEFLLKTSIDVETGSFNLLDETGGHE >gi|289656357|gb|ADEA01000010.1| GENE 9 7515 - 9503 401 662 aa, chain + ## HITS:1 COG:STM0268 KEGG:ns NR:ns ## COG: STM0268 COG3519 # Protein_GI_number: 16763650 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 6 659 1 624 627 341 32.0 3e-93 MKPAAMNNKFLSYYNKELTFLKEMGREFALRYPKVASRLALNASDIPDPYIERLLEGVSF LTARTQLKLDAEYPRFIQRILEIVYPDFINQKPAAAIVALKPLQQYNSDVINVLERGKTL RSLPIDEYKTNCPFSITRTTDILPIHIEKTKYTDSLGYLPNNLLFFKQAEKKIQTALRID FSLSVPNACSEMIPDELPLYLGSELSKSSELLFLMAAECAGVVCHSSENPKQWCFPLASK PEHIGFSEEEALSFDLDKSVSAFRILQEYALLPEKFLFVLQKNLKQAIIQAEAKGHLPKK PEQSEEVISDKGVNKKIINYKKRYFSLSFLFTEKIPELIELVNEDDISINAVPVVNLFRK KSARFPVNIQDREHHVVIDRTQPLNYEVHSIKQVTGFDTNNRQIVTFLPMYQAPDTGLFP ESKTRKAYFSVRRADRVPSSDTLKNGFRTSYLGSEVFLSLADGENYTFNSSIQHLSVDAW CTSRDLPLLMPRDGNSDFLLEGSLPLQSIKLISKLTRPKPAANEDKMLWPFLNQLSLNYL SLLNVDQDDAPVTLKELLMIFVSSENDLMKKQIESIAKIKTEIISKVVRYHGTASPVRGI RIILILDDSSLGGIHPFLFGSVLNHYFKRLVSMNSFVQLQIETFQQGHIATWPAIVGERT LI >gi|289656357|gb|ADEA01000010.1| GENE 10 9500 - 10546 109 348 aa, chain + ## HITS:1 COG:PA0089 KEGG:ns NR:ns ## COG: PA0089 COG3520 # Protein_GI_number: 15595287 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 27 345 13 330 348 220 37.0 3e-57 MKTSSDEKNTIGENSLSEDLWNEDLTNFLHRVSAQPHKYDYFSLLRQLEGVKFVTGNKAF GKSTSPKLEKIRIRQEPSLIFAPRNIHSVNLTANYAEISINGFGLFGPSGPLPLHITEYA YERQHQHGDRTWTEFTNIFQHRLAILFYRAWANAQSIVSLDKNSENRFGKYIACFNGLYS PSTQSKEKIHPFSKCYFAGLLLRQSRSAANLQKLLTQYFKVPTNIQTNIGYWIDVPEEKT LIGISSYPLGTGLLLGDKLYDVQSKFRIIIGPLTLDAYQSFFKNGYNTLRLKEWIRIFLA DEYEWDVQPILMQKEIPPCTLGGDTQLGLSTWLGTVEHDAEDLIVQSH >gi|289656357|gb|ADEA01000010.1| GENE 11 10643 - 13273 1220 876 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 8 850 1 788 815 474 34 1e-133 MSDISRSVLFGKLDATLYKALENAYTFCRLRENSYVELAHWLHTLLQAENTDVFCLIKRF DLDEAKIRKDILAAVEKLPSGATAVTDFSEHIQIAVEQSWTYSSLKFGTDKIRGAHLFYT LLKLKNLQNILANISPEFLKLKPETLADEILTITANSEENADIAKHIPSDRTTAGSNNAE SALAKYGSNLTEKARNGEIDPVTGRDAEIRQIIDILMRRRQNNPILTGEAGVGKTALVEA LALRLAAGDVPPNLKGVQLILLDIGLLKAGASVSGEFEARLRSVMDEVESSPIPIVLFID EIHMLIGAGGAAGTGDAANLLKPALARGKLRTIGATTWSEYKKYFEKDPALTRRFQVVQV EEPNEKQAADMLRSISGSLEKHHKVIILDEAIQAAVKLSHRYIPARQLPDKAVGLIDTAC ARVAVSQHSTPSNIEYLQKKLQALQVEQAGLERERKLCLDSKDRLNAIAQESSDIQNQLK NLEDRWQKESDLVTNLLSVREKIMSPEISDNPTENNQLFEQQKKLVTELKALQGTKPLVM PLVDELVIADVVADWTGIPVGKMMKDELEAVLMLTDTLAQRIIGQNHGLEAIARRIQTSR ANLDNPNKPIGVFMLAGPSGVGKTETALALADTFYGGEQNVITINMSEFQEAHTVSTLKG APPGYVGYGEGGILTEAVRRRPYSVVLLDEVEKAHPDVHEIFFQVFDKGWMEDGEGRYID FKNTIIILTTNVGTDLIMDMCEDPDLLPSPEGLLKALRPSLLKVFPAALLGRMQVIPYYP LSADMLTKIVELQLGNIVKRIKANHNIELTYQPAVLNLIVSRCTEIESGGRMIDAILTNT VLPQISRELLSRATEDKQIFKIRIGVKNNDFTYKYS >gi|289656357|gb|ADEA01000010.1| GENE 12 13351 - 14289 254 312 aa, chain - ## HITS:1 COG:mlr2351 KEGG:ns NR:ns ## COG: mlr2351 COG5351 # Protein_GI_number: 13472150 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mesorhizobium loti # 3 265 65 319 367 100 28.0 5e-21 MRSSILAECDFVIYKPKVDIIINATAYSPNEKKIEEIPACIQIGDYEKSLVATGERHWIK EVIGWTLGKPKSIYSLPIRYEYAFGGIHAGGKKECGYLQENLVGKGSYSNEFLKRNSYKK LLEAHQIYDPTKPILEPNEINIPEGFGFFARYFASRVQYSGTMDTEWMENRAPLLPKDFS MSFWNGAHPELQIPYLKHNHVYKLTFIGLIPSYIAPKQRFSILLPIETLFVHVLTVSNFS IALDLKLDTILVDVEKRKIDCSYRIALPEELEIEQCQLRYISRNERQLQIELAKEYERVR KTDFIIIPPSLR >gi|289656357|gb|ADEA01000010.1| GENE 13 14506 - 16782 313 758 aa, chain - ## HITS:1 COG:mll2357 KEGG:ns NR:ns ## COG: mll2357 COG3501 # Protein_GI_number: 13472156 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mesorhizobium loti # 3 753 5 762 775 437 34.0 1e-122 MNRTIIAQTPFGSDLLFKRMTGVEKISDLFEFDIVFVSKNANLQGNEIIGQPITLEIDTQ TGGKRYLNGLATDFGYIGEDEDEEGYYTYTCIVRPFMWYLTQNVDSRSFVEKSVLDISKE VLSSFGFPYQIQCQKSYRTRGYCVQYQESSFNFLNRIFEQEGIYYYFKHTSDSHELIIVD DVNVLPSISGTVSIPYHSRQSTPGTPDIEYIDEWLEKDSLKSSQFITQDYNYKNAKVEMK ASEAVHNFNSIDMKHYEFYTGFSDVSEAQNYSQVRSESLKSETKLIRGAGTALTLAPGHT FSLIKHPHYSSNTEYLLISTKYEFEEAGYTTGEKIGSFRISFRALPKSFQYRPALKTLKP QVIGTQAATVTGPGGEEVYTNEYGDIKIQFHWDKYGQMNENSSGWVRVAQGSAGSGFGSI NTPRVGEEVLVDFINGDVDRPIIIGRLYNSAMTPPWGFPSAAKQSGIKSKSFNSPLANYN ELMFNDTAGAEIVNFQAQKDLTSLVKNNETRNVNNDRTTTIGNNETLSVTGERTKSIQKN ETVSVAQNRNASVGQDESLAVTQNQSLNVGQSQSISVGKDQSVNVSMNRTRSVGQSEQIS VGQSQALMIGQDQSVTVGKNQAFTVGANRNKTVTANEVSNIGGNRQETVTICSIDNVGAA KVTNVGGASMLNVGGLSMTNVIGAETHIVGGAIALASGLHASMRSAINTTIVAGAKVTLR VGGSSITMSRGEIKISAKKITINGKRVVSVDSSKIHLN >gi|289656357|gb|ADEA01000010.1| GENE 14 16836 - 20384 1660 1182 aa, chain - ## HITS:1 COG:PA0077 KEGG:ns NR:ns ## COG: PA0077 COG3523 # Protein_GI_number: 15595275 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 77 1171 4 1087 1101 464 29.0 1e-130 MKKILYFLGSRSLWVILGILGLIALIWFIGPLIAIGDARPLVGKGIRAIICLALLAFCVA KIVFRHYRESRRNAALLREIKAAQEPILKDSADISSMSRQFAEIDRVLKNARFSKSENRF LARFNSGQYLYQMPWYVVLGAAGSGKTTALKQSGLNFPLESTLGSSLSGLAGTRDCDWFL SDEAVLLDTAGRLSIHDEHSNKDSEDWEEFVSLLKRYRPKQPINGALVTVGVDDLLNGTT NIAEIAVELRKRIHEMRTKLGIDFPLYLMVTKLDLLHGFNPFFKHLTEEQSKQYFGISLA SNEGAETPIATASNLLSEVVDKLRISMLGTVNELESSEDKAAAFAFPEEFERLNHAVLSL LKELSKSSKFEDSIVWRGVYFSSATQEGEGFNPVLDGLQDDFRLSKKYLDSETKTSNTQA SFFLNKLFADVIFNEAGLAGENKSWFVRNQMQYWLGVAAAAIVVVGCLTLMLNSYSNNGS YLEQVKNKAIQLEKKIRPSENTPDLLKAVTFAEQVRDTTKTKELPDLSSPPLSYRMGLYQ GNQMKDVGESSYQRILEDNVMPLISYRIDELLRTTRGSDGIKGYNALKAYLMMFDKERFD PEFMRSWLMSNLSESEVANISAAQKESVEAALTQILSKRRIITSIPYDADLVDQRRREVS QRDIASMVWEDTANSIIHSDVTGLRPVSFSSMGGVQSHLLFRRKSGRSLKEPIDFLYTKE TYMTRVLPAMVKSAEQFFNEDSWVLGDYASLSQSKENVLSDAQGIYFNNYIRVWKDYLSD LSLVTSKSARENIQIAKLLSEKNSPLVSLIKGISNNTKLSFTNDIADKTDNKLTEWLNKS GLGGLIGKDGKVSDDLNALTKVNPVDDVFSDYHILTVSENNQPPAINNVTDAINDLYVYL VAVNVAVEKGVDLPPDDSLVKYKAEVNRLPPPFREMLDNFSGVILQNTDKVVDEKLMSSL DTQLADVSNKCENITKQGYPFIAGSNNNVAVEEFANIFGPNGMYSQFNNLSGSNAILAKS DKLDTVITKNELFKERFAILNHIAEIRKSYFDKNSETPKFDFSIKVVMLDPELESVNISY DGKSYIYSHGPVTPIAFSWPAQNGDAGAKIDVVSPQTRDAGISTAGPWSIFRLVEKGRIV QQTNNTTTVEYNIRGKNVVLEFATSTSPNPFNLAKLHNFNCI >gi|289656357|gb|ADEA01000010.1| GENE 15 20458 - 21711 217 417 aa, chain - ## HITS:1 COG:PA1668 KEGG:ns NR:ns ## COG: PA1668 COG3455 # Protein_GI_number: 15596865 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 16 235 61 280 289 138 35.0 2e-32 MSNQNQAIYGATGGYNPLIEAAKSVFILVNAMKHTTSQLSSDGLINKFSLLINRFEEEAE KNGAKYDAIQAAKYCLCTFVDESAVRAGWADEHWAKNSLLVSFYDETWGGERFFEILNTL KQDVNKNIDLIEFMYLCLQFGYKGKYQVLTSGELEVDKIKRDLLAIIHSKRPDQMASLLG SDPVVKNIVQRKQHLTIPLWVVGVLGGVILSVAYFSMQWSLGSKFDTASTKVNSLRLPVV TPKHKKPTNFTRLRPLLENEIARKLVSVKDDPDRSTVTILGDGLFESGSTSIQDQYYPVL AAVGQALNSVDGQVVVTGYTDNTPIQSLEYPSNWHLSQGRADAVKEILLSYMRNGANRIR SEGRGSTNPVAPNDSPENKAKNRRVEITLFATDTNGPKLGRETIVPEDAAPTQNQDN >gi|289656357|gb|ADEA01000010.1| GENE 16 21731 - 23077 499 448 aa, chain - ## HITS:1 COG:PA0079 KEGG:ns NR:ns ## COG: PA0079 COG3522 # Protein_GI_number: 15595277 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 1 445 1 443 444 290 37.0 5e-78 MAIEPKVVWSEGIFITPQHFQQFDRYIESGLRQLSVLREGFYWGFTALELDISGLKQGVI GINAAEGVFPDGSIFSFTEKQLEAVSAKIPPNTKDTKLCLALTLPSSVNNEFAFPENTKA VGLHRFKTFEKSVSDITNIELEPRQLTLADFNPVLVLESDIGQGQTSLPIAVIRSCSADS EITLDDLYIPPFLGSQQQHHLRSYISESYGLLLQKSNSLANAVNDPNTGGSVEVVDFMML QTINRYLAYLSHEQEGARQTHPETLFVNLSKLCADLMTFLPSRKFNDMPIYMHNDLALCF SQLFINLRKSLSIVLEQRAIRIPLDMRDDSLRVAQTPDQSLLDKASFVLAVKADIPNDVL RQRIPSIVKIGTVEKVKELVAYHLPGIKVHALSVAPRELPYHSGYVYFELDKKNELWDMF DTSSGMAFHLAGSFPSLDIEFWAIKSLN >gi|289656357|gb|ADEA01000010.1| GENE 17 23107 - 23577 229 156 aa, chain - ## HITS:1 COG:PA0080 KEGG:ns NR:ns ## COG: PA0080 COG3521 # Protein_GI_number: 15595278 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 1 77 51 127 154 62 32.0 4e-10 MDLYQLATDSEFKQFNYLELTEQAKEKIGDKLIQHDQYIFYPDTVKVLPVKVDSHLKYLG VVAGYRNLDNSQWRLILLKQKKRWYQFGKQYLYLSVDKSTLSQISKSDMKEKLRNYKERH PEDKNITFGGKAKGEKNDLSKGIFRETVKDDYEAVK >gi|289656357|gb|ADEA01000010.1| GENE 18 24048 - 25293 1525 415 aa, chain + ## HITS:1 COG:PA2684 KEGG:ns NR:ns ## COG: PA2684 COG3209 # Protein_GI_number: 15597880 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Pseudomonas aeruginosa # 118 409 17 324 1317 103 30.0 8e-22 MAFQKTARKDSAFRIVCILPDFCFLPTPPTPPQAPPIPFPLTTDLGKAKSVARDVLINKK PAFVFDASYAPKTFGDEPADPKVPAGGLRKKGILSHTAGEAAWPFTHSSSVKIRNHYIIR TGDMFHMNNKYKGRLKKKCPACKAAVLAGLPVNPILGIKVLADETDFDFSGILPLVWNRS YFSDQPGTGWLGNGWSVPGCRRIVRSADGMTYIDEQGRCLPLPNLDDGGPVLNEAEMLWF ARDGAHYFVTALDGSLSLRFVPVSVSDDDPEGADCPLFVLAAIEDGNGNCQRWLYHPATG LPQFVVDGNGRVFHLQFGNVASAAEPMMRLTAVSLLDALPPFGSTTPRGRVLVRYEYSAT GDLLRVFGRDGNLSRSFTYRNHIMLSHTDAAGLVSSYEYDRYDAEGRVLLNTVSD Prediction of potential genes in microbial genomes Time: Thu May 26 13:17:46 2011 Seq name: gi|289656356|gb|ADEA01000011.1| Neisseria sp. oral taxon 014 str. F0314 cont1.11, whole genome shotgun sequence Length of sequence - 2363 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 2361 3615 ## COG3209 Rhs family protein Predicted protein(s) >gi|289656356|gb|ADEA01000011.1| GENE 1 3 - 2361 3615 786 aa, chain + ## HITS:1 COG:PA2684 KEGG:ns NR:ns ## COG: PA2684 COG3209 # Protein_GI_number: 15597880 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Pseudomonas aeruginosa # 41 782 209 933 1317 235 30.0 2e-61 FVPVSVSDDDPEGADCPLFVLAAIEDGNGNCQRWLYHPATGLPQFVVDGNGRVFHLQFGN VASAAEPMMRLTAVSLLDALPPFGSTTPRGRVLVRYEYSATGDLLRVFGRDGNLSRSFTY RNHIMLSHTDAAGLVSSYEYDRYDAEGRVLLNTVSDGRQWRFDYHDGHTDVTDVLGRTER YRFDGNNELTGRTFADGSETSMERDRLGRLTAYTDALGRTTYYQYSREGQLTDITRPDGV TLHREYDDDYRLIIASDAEGNTDNYGYDDTGNLIRHTDTVGGVTRFSYLGNGLLETVTDP EGHTVSYRYGTDNLPEAVTDCSGYETRFEYNEDGLPLRITDAEGGRTEYHYDAALRPVAA RYADGSNETFAYDAAGRLVRHTDAAGHATGYEYGPDGLLLQRTDALGHTFRYRYDAARRL VRLTNENGAHYRFAYGLLDELAAECGFDGKLTGYRYNAAGELTEQLEYGRVEEERVAALF ARDGGEISDGPAPLRTAAFDRDSLGRLTRSLLRQDGGEWETRFGYDAEGRLVRAADANGI TCFDYDVLGRIIQEAFRPHRPEADRDEALPETDWQNPDHDLILLHKFRNVRYRYDGNGNR TAVELPGGSGLENLYYGSGHLHRIAFDGETVTDIERDRLHRETGRTQGRLASRYTLDPLG RLKSQLAVPAGPSESKGKAAVTAAVKRSYGYDRTGNLTQSTDPRTGTTQFEYDKLGRITR AGDELFAFDPAHNIVDIPARPSENIPEGISEAADKAHTATVKDNRIKTYDGAEYYYDTFG NLTFMS Prediction of potential genes in microbial genomes Time: Thu May 26 13:17:48 2011 Seq name: gi|289656355|gb|ADEA01000012.1| Neisseria sp. oral taxon 014 str. F0314 cont1.12, whole genome shotgun sequence Length of sequence - 4144 bp Number of predicted genes - 5, with homology - 4 Number of transcription units - 4, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 1254 1445 ## COG3209 Rhs family protein - Prom 1361 - 1420 4.1 2 2 Tu 1 . - CDS 1537 - 1995 249 ## gi|298369099|ref|ZP_06980417.1| hypothetical protein HMPREF9016_00768 - Prom 2025 - 2084 3.8 - Term 2314 - 2351 4.7 3 3 Tu 1 . - CDS 2421 - 2840 171 ## 4 4 Op 1 . - CDS 2953 - 3285 88 ## Fjoh_0956 hypothetical protein 5 4 Op 2 . - CDS 3295 - 4143 961 ## COG3209 Rhs family protein Predicted protein(s) >gi|289656355|gb|ADEA01000012.1| GENE 1 3 - 1254 1445 417 aa, chain - ## HITS:1 COG:PA2684 KEGG:ns NR:ns ## COG: PA2684 COG3209 # Protein_GI_number: 15597880 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Pseudomonas aeruginosa # 104 409 5 324 1317 110 29.0 5e-24 MAFQKTARKDSAFRIVCILPDFCFLPTPPTPPQAPPIPFPLTTDLGKAKSVARDVLINKK PAFVFDASYAPKTFGDEPADPKVPAGGLRKKGILSHTAGEAAWPFTHSSSVKIHGHYIVR TGDMFHMNNKYTGQSEGKCPACKAAALAGLPVNPILGIKVLPDETDFAFSGILPLVWNRS YFSDQPGTGWLGNGWSVPGCRRIVRSADGMTYIDEQGRCLPLPNLDDGGPVLNEAEMLWF ARDGAHYFVTALDGSLSLRFVPVSVSDDDPEGADCPLFVLAAIEDGNGNCQRWLYHPATG LPQFVVDGNGRVFHLQFGNVASAAEPMMRLTAVSLLDALPPFGSTTPRGRVLVRYEYSAT GDLLRVFGRDGNLSRSFTYRNHIMLSHTDAAGLVSSYEYDRYDAEGRVLLNTVSDGR >gi|289656355|gb|ADEA01000012.1| GENE 2 1537 - 1995 249 152 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298369099|ref|ZP_06980417.1| ## NR: gi|298369099|ref|ZP_06980417.1| hypothetical protein HMPREF9016_00768 [Neisseria sp. oral taxon 014 str. F0314] # 1 152 1 152 152 231 100.0 9e-60 MKKEENTNFYQKLILIEDEIYESDILNNYDLFIRKCIDFAKKKIIPLSDNQKYLDEKIKL SIDFIEGRLSKSELIEASYQFTKEIYASSSNIKEKKIKYFICFLLDSDFLQNITPDEQQD SYISYLLSTLYEIQDNIVLCEEFYKFINEELS >gi|289656355|gb|ADEA01000012.1| GENE 3 2421 - 2840 171 139 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFDDELNDFLDENNVRFSILDKDIFNKYAKIENYPFTGSRISWSKLKIHISKSFHELPKF INEVSNILSSLNENQPNIILIGNDFQDGYCIDFSIKNLESISHFLMEYPGENYLFGLNQE WCICIYDVLDFGLPEPKLS >gi|289656355|gb|ADEA01000012.1| GENE 4 2953 - 3285 88 110 aa, chain - ## HITS:1 COG:no KEGG:Fjoh_0956 NR:ns ## KEGG: Fjoh_0956 # Name: not_defined # Def: hypothetical protein # Organism: F.johnsoniae # Pathway: not_defined # 1 109 5 114 114 75 43.0 4e-13 MNKFIYKNASDITRHWEFCNQNKYPFITINNIDRNFNEIFFDITNISNKLEEVSNSIKEI SYCYNNFFLIPDYISERYESQYYYFEFPVINTHSELIANQLFDYLLDNIS >gi|289656355|gb|ADEA01000012.1| GENE 5 3295 - 4143 961 282 aa, chain - ## HITS:1 COG:YPO3609 KEGG:ns NR:ns ## COG: YPO3609 COG3209 # Protein_GI_number: 16123751 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Yersinia pestis # 1 188 147 326 456 157 45.0 1e-38 DALDRRIAKEQVEVGEEHRPAADGKGRLKTVPGNRIEFVWDGSHLLQEIHPHGSYTYVYT DQDSYEPLAQICEWEDEAGETRRQVNYFHCDQIGLPREMTDGEGRLLWFGNYGGWGKLTE ETNIANAHQPFRLQNQYCDGETGLHYNFFRYYDPHSGRFVTQDPIGLLGDENFYTFASNV QEWIDPLGLKKKASSRKPKFVSTKSTGRTKPRNALESKIMDQVKKRPEKGNVIIRADQIG DRCYAGKGWNKMEQKIDGVTIHYMAKFDKAGKMTHVTDFKFK Prediction of potential genes in microbial genomes Time: Thu May 26 13:18:05 2011 Seq name: gi|289656354|gb|ADEA01000013.1| Neisseria sp. oral taxon 014 str. F0314 cont1.13, whole genome shotgun sequence Length of sequence - 1154 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 1154 1648 ## COG3209 Rhs family protein Predicted protein(s) >gi|289656354|gb|ADEA01000013.1| GENE 1 2 - 1154 1648 384 aa, chain - ## HITS:1 COG:YPO3609 KEGG:ns NR:ns ## COG: YPO3609 COG3209 # Protein_GI_number: 16123751 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Yersinia pestis # 89 384 14 299 456 170 36.0 5e-42 DRTAVELPGGSGLENLYYGSGHLHRIAFDGETVTDIERDRLHRETGRTQGRLASRYTLDP LGRLKSQLAVPAGPSESKGKAAVTAAVKRSYGYDRTGNLTQSTDPRTGTTQFEYDKLGRI TRAGDELFAFDPAHNIVDIPARPSENIPEGISEAADKAHTATVKDNRIKTYDGAEYYYDT FGNLTFMSLPDGGSRTLSYDLKDRLVLAEIWREGGKEIWRYEYDALDRRIAKEQVEVGEE HRPAADGKGRLKTVPGNRIEFVWDGSHLLQEIHPHGSYTYVYTDQDSYEPLAQICEWEDE AGETRRQVNYFHCDQIGLPREMTDGEGRLLWFGNYGGWGKLTEETNIANAHQPFRLQNQY CDGETGLHYNFFRYYDPHSGRFVT Prediction of potential genes in microbial genomes Time: Thu May 26 13:18:06 2011 Seq name: gi|289656353|gb|ADEA01000014.1| Neisseria sp. oral taxon 014 str. F0314 cont1.14, whole genome shotgun sequence Length of sequence - 2683 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 1086 520 ## COG3209 Rhs family protein + Term 1122 - 1175 -0.3 + Prom 1103 - 1162 7.2 2 2 Tu 1 . + CDS 1188 - 2075 642 ## gi|298369104|ref|ZP_06980422.1| hypothetical protein HMPREF9016_00773 Predicted protein(s) >gi|289656353|gb|ADEA01000014.1| GENE 1 1 - 1086 520 361 aa, chain + ## HITS:1 COG:YPO3609 KEGG:ns NR:ns ## COG: YPO3609 COG3209 # Protein_GI_number: 16123751 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Yersinia pestis # 5 203 138 328 456 162 45.0 1e-39 WREGGKEIWRYEYDALDRRIAKEQVEVGEEHRPAADGKGRLKTVPGSRIEFVWDGSHLLQ EIHPHGSYTYVYTDQDSYEPLAQICEWEDEAGETRRQVNYFHCDQIGLPREMTDGEGRLL WFGNYGGWGKLTEETNIANAHQPFRLQNQYCDGETGLHYNFFRYYDPHSGRFVTQDPIRL WGGFNLYQFALNTQKWIDILGLARNRYRGKSCDELKEIIDRLINAKRTSSGSGTKGLKCR FEEQIYGNSPPGSTGWNNHQGNIENDQKALNRALDAWDDGGCGPRPPGATEWATKPLPTA ADYKGNGGSVMNGDTLRTTAKTTTTIVTSVGVGYLIYRGVRMLPSLFPPLWPTIPANAAI P >gi|289656353|gb|ADEA01000014.1| GENE 2 1188 - 2075 642 295 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298369104|ref|ZP_06980422.1| ## NR: gi|298369104|ref|ZP_06980422.1| hypothetical protein HMPREF9016_00773 [Neisseria sp. oral taxon 014 str. F0314] # 78 295 1 218 218 384 99.0 1e-105 MHNCTLLTEIKDNLIFPTSPSCSENERSRIDFFDNLKLLLSDAVSSPSISNNIAYLDAFL GTNLRNGRNSAISLLRTLSTQQKSIIQKGTDAVLGFLKTNYAEEKDKIYWAGFMLEWLSE ESKIYGELPKYFNSLNIVSRTNILDAASLKFNRESLQDLEWLIDNISEKNWYDFEYDILI IILESRNYYLLSPDAYKLLIPAFIREMEGLLSTATNGFFYINLLDLGDFLAYLNPIEARK LELLGEEQKEYIGRYLLLIKKLFEIIDDDEEIENLILNKYWQRYVNRPSFDDKAV Prediction of potential genes in microbial genomes Time: Thu May 26 13:19:19 2011 Seq name: gi|289656352|gb|ADEA01000015.1| Neisseria sp. oral taxon 014 str. F0314 cont1.15, whole genome shotgun sequence Length of sequence - 208645 bp Number of predicted genes - 192, with homology - 185 Number of transcription units - 124, operones - 46 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 2 - 982 772 ## COG3209 Rhs family protein 2 1 Op 2 . + CDS 1005 - 1271 262 ## gi|298369107|ref|ZP_06980425.1| conserved hypothetical protein 3 1 Op 3 . + CDS 1311 - 1814 171 ## gi|298369108|ref|ZP_06980426.1| hypothetical protein HMPREF9016_00777 4 2 Tu 1 . + CDS 2625 - 2765 105 ## 5 3 Op 1 . + CDS 2925 - 3392 216 ## gi|298369109|ref|ZP_06980427.1| conserved hypothetical protein 6 3 Op 2 . + CDS 3413 - 3568 193 ## 7 3 Op 3 . + CDS 3579 - 3944 144 ## gi|298369110|ref|ZP_06980428.1| cytochrome c biogenesis protein - Term 4375 - 4417 -0.0 8 4 Tu 1 . - CDS 4656 - 5696 1512 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases - Prom 5821 - 5880 6.5 + Prom 5792 - 5851 5.5 9 5 Tu 1 . + CDS 5875 - 6924 661 ## PROTEIN SUPPORTED gi|46129221|ref|ZP_00155777.2| COG1194: A/G-specific DNA glycosylase + Term 6949 - 6992 7.0 - Term 6939 - 6978 5.3 10 6 Tu 1 . - CDS 6992 - 7861 1423 ## COG1561 Uncharacterized stress-induced protein - Prom 7894 - 7953 3.2 + Prom 7866 - 7925 5.3 11 7 Op 1 . + CDS 7947 - 8687 1094 ## COG0689 RNase PH + Prom 8760 - 8819 4.5 12 7 Op 2 . + CDS 8928 - 10148 2121 ## COG0527 Aspartokinases + Term 10167 - 10211 14.8 - Term 10204 - 10238 -0.9 13 8 Tu 1 . - CDS 10258 - 11538 1840 ## COG0334 Glutamate dehydrogenase/leucine dehydrogenase - Prom 11559 - 11618 6.4 + Prom 11500 - 11559 5.6 14 9 Op 1 1/0.406 + CDS 11792 - 12502 1340 ## COG0546 Predicted phosphatases 15 9 Op 2 . + CDS 12566 - 13036 636 ## COG2137 Uncharacterized protein conserved in bacteria + Prom 13039 - 13098 2.5 16 9 Op 3 . + CDS 13126 - 13296 342 ## NGO1054 hypothetical protein + Term 13310 - 13357 12.1 - Term 13297 - 13347 13.1 17 10 Op 1 22/0.000 - CDS 13361 - 14431 1693 ## COG0795 Predicted permeases 18 10 Op 2 . - CDS 14428 - 15543 1659 ## COG0795 Predicted permeases - Prom 15738 - 15797 3.2 + Prom 15603 - 15662 3.6 19 11 Op 1 . + CDS 15741 - 17150 2248 ## COG0260 Leucyl aminopeptidase 20 11 Op 2 . + CDS 17247 - 17729 821 ## COG0662 Mannose-6-phosphate isomerase 21 11 Op 3 2/0.344 + CDS 17805 - 18242 637 ## COG2927 DNA polymerase III, chi subunit + Prom 18308 - 18367 8.2 22 12 Tu 1 . + CDS 18394 - 19209 1360 ## COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 + Term 19235 - 19295 11.1 + Prom 19387 - 19446 1.9 23 13 Op 1 . + CDS 19502 - 20128 770 ## COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN 24 13 Op 2 . + CDS 20185 - 20862 1070 ## NGK_0287 hypothetical protein + Term 20886 - 20934 15.1 - Term 20870 - 20926 21.9 25 14 Op 1 . - CDS 20945 - 21691 870 ## COG0738 Fucose permease 26 14 Op 2 . - CDS 21748 - 22170 549 ## COG0738 Fucose permease - Prom 22244 - 22303 4.4 - Term 22358 - 22411 21.0 27 15 Op 1 . - CDS 22454 - 23311 1109 ## COG1737 Transcriptional regulators 28 15 Op 2 6/0.125 - CDS 23429 - 24460 1403 ## COG0837 Glucokinase 29 15 Op 3 15/0.000 - CDS 24441 - 25136 199 ## PROTEIN SUPPORTED gi|163781723|ref|ZP_02176723.1| 50S ribosomal protein L13 30 15 Op 4 . - CDS 25316 - 26761 1999 ## COG0364 Glucose-6-phosphate 1-dehydrogenase + Prom 27002 - 27061 7.1 31 16 Tu 1 . + CDS 27187 - 29019 2997 ## COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase + Term 29026 - 29075 12.7 + Prom 29227 - 29286 3.0 32 17 Tu 1 . + CDS 29391 - 30029 1219 ## COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase + Term 30045 - 30095 15.2 - Term 30162 - 30216 18.7 33 18 Op 1 12/0.062 - CDS 30245 - 30919 1065 ## COG2864 Cytochrome b subunit of formate dehydrogenase 34 18 Op 2 16/0.000 - CDS 30919 - 31839 1130 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 35 18 Op 3 . - CDS 31850 - 34903 3742 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing - Prom 35047 - 35106 7.4 36 19 Tu 1 . - CDS 35213 - 35737 699 ## COG0526 Thiol-disulfide isomerase and thioredoxins - Prom 35769 - 35828 6.2 + Prom 35754 - 35813 8.6 37 20 Tu 1 . + CDS 35966 - 37387 1839 ## APJL_1741 hypothetical protein - Term 37404 - 37445 11.3 38 21 Op 1 . - CDS 37462 - 38457 1287 ## COG0078 Ornithine carbamoyltransferase - Prom 38508 - 38567 2.1 39 21 Op 2 . - CDS 38575 - 39327 864 ## COG0350 Methylated DNA-protein cysteine methyltransferase - Prom 39455 - 39514 3.1 + Prom 39552 - 39611 2.9 40 22 Tu 1 . + CDS 39639 - 40196 643 ## COG1881 Phospholipid-binding protein 41 23 Tu 1 . - CDS 40174 - 41022 666 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 41115 - 41174 6.3 - Term 41367 - 41400 3.1 42 24 Op 1 . - CDS 41414 - 42559 1331 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 43 24 Op 2 . - CDS 42645 - 43265 793 ## NGK_0797 hypothetical protein 44 25 Tu 1 . - CDS 43398 - 43907 757 ## NMA1732 hypothetical protein - Prom 43937 - 43996 3.8 - Term 43966 - 44001 4.1 45 26 Tu 1 . - CDS 44018 - 44602 673 ## COG3241 Azurin 46 27 Tu 1 . - CDS 44955 - 45380 351 ## NMCC_1443 hypothetical protein - Prom 45519 - 45578 4.4 + Prom 45457 - 45516 3.4 47 28 Tu 1 . + CDS 45554 - 48307 4100 ## COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) + Term 48335 - 48380 11.3 + Prom 48327 - 48386 3.6 48 29 Op 1 . + CDS 48416 - 49528 1744 ## COG0082 Chorismate synthase + Prom 49532 - 49591 1.6 49 29 Op 2 . + CDS 49619 - 50068 744 ## NMB1681 hypothetical protein + Prom 50209 - 50268 3.7 50 30 Tu 1 . + CDS 50296 - 51210 1369 ## COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes + Term 51224 - 51289 4.1 + Prom 51241 - 51300 4.8 51 31 Tu 1 . + CDS 51351 - 51929 851 ## COG3545 Predicted esterase of the alpha/beta hydrolase fold - Term 51937 - 51990 12.1 52 32 Tu 1 . - CDS 52017 - 54464 2935 ## COG2217 Cation transport ATPase - Prom 54530 - 54589 6.5 53 33 Tu 1 . + CDS 54877 - 55002 126 ## - Term 55033 - 55072 1.1 54 34 Tu 1 . - CDS 55099 - 56265 681 ## PROTEIN SUPPORTED gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 - Term 56441 - 56477 5.0 55 35 Tu 1 . - CDS 56498 - 57268 915 ## COG0688 Phosphatidylserine decarboxylase - Prom 57296 - 57355 5.6 - Term 57409 - 57462 6.6 56 36 Op 1 . - CDS 57475 - 57999 441 ## COG1401 GTPase subunit of restriction endonuclease - Prom 58022 - 58081 1.6 57 36 Op 2 . - CDS 58083 - 58388 217 ## NGK_0684 hypothetical protein - Prom 58411 - 58470 7.8 - Term 58468 - 58518 3.6 58 37 Tu 1 . - CDS 58535 - 59608 1338 ## COG3213 Uncharacterized protein involved in response to NO - Prom 59780 - 59839 2.2 - Term 59700 - 59728 2.3 59 38 Tu 1 . - CDS 59928 - 60554 460 ## COG4300 Predicted permease, cadmium resistance protein - Term 60762 - 60806 10.8 60 39 Op 1 7/0.094 - CDS 60961 - 61653 177 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 61 39 Op 2 . - CDS 61653 - 62450 976 ## COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component - Prom 62496 - 62555 2.3 62 40 Tu 1 . - CDS 62639 - 63358 334 ## ECSE_0286 hypothetical protein - Prom 63593 - 63652 2.7 63 41 Tu 1 . - CDS 63788 - 64765 1335 ## COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components - Prom 64850 - 64909 4.7 + Prom 64981 - 65040 6.8 64 42 Tu 1 . + CDS 65074 - 66462 2289 ## COG0114 Fumarase + Term 66491 - 66549 11.0 - Term 66484 - 66533 9.1 65 43 Op 1 . - CDS 66601 - 67311 1128 ## COG3471 Predicted periplasmic/secreted protein 66 43 Op 2 . - CDS 67378 - 68787 2027 ## COG0569 K+ transport systems, NAD-binding component - Prom 68810 - 68869 2.8 + Prom 68959 - 69018 2.5 67 44 Tu 1 . + CDS 69106 - 69288 398 ## + Term 69305 - 69371 29.1 - Term 69299 - 69350 21.0 68 45 Tu 1 . - CDS 69388 - 70839 2333 ## COG0471 Di- and tricarboxylate transporters - Prom 71072 - 71131 1.9 + Prom 70941 - 71000 2.8 69 46 Tu 1 . + CDS 71068 - 71304 181 ## 70 47 Op 1 . - CDS 71382 - 72635 1799 ## COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit 71 47 Op 2 . - CDS 72632 - 74260 2521 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 72 47 Op 3 . - CDS 74260 - 74898 980 ## AZC_0123 4Fe-4S ferredoxin - Prom 75009 - 75068 3.5 - Term 75527 - 75564 7.8 73 48 Tu 1 . - CDS 75584 - 76360 658 ## COG0501 Zn-dependent protease with chaperone function - Prom 76456 - 76515 3.7 - Term 76403 - 76456 11.2 74 49 Tu 1 . - CDS 76532 - 77467 1158 ## COG1686 D-alanyl-D-alanine carboxypeptidase - Prom 77710 - 77769 5.9 + Prom 77672 - 77731 7.6 75 50 Tu 1 . + CDS 77836 - 79110 252 ## PROTEIN SUPPORTED gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 + Term 79155 - 79196 9.6 + Prom 79256 - 79315 5.9 76 51 Tu 1 . + CDS 79361 - 81946 3823 ## COG1049 Aconitase B + Term 82021 - 82062 8.2 77 52 Tu 1 . + CDS 82760 - 86077 4579 ## COG1629 Outer membrane receptor proteins, mostly Fe transport + Term 86093 - 86135 11.9 + Prom 86424 - 86483 10.4 78 53 Tu 1 . + CDS 86645 - 87565 1315 ## NGK_1375 hypothetical protein + Term 87616 - 87658 8.4 79 54 Tu 1 . + CDS 87666 - 89132 1715 ## NGO0555 hypothetical protein - Term 88926 - 88982 4.6 80 55 Tu 1 . - CDS 89170 - 90069 781 ## COG1073 Hydrolases of the alpha/beta superfamily 81 56 Op 1 5/0.125 - CDS 90201 - 90641 648 ## COG3154 Putative lipid carrier protein 82 56 Op 2 13/0.062 - CDS 90628 - 91536 1216 ## COG0826 Collagenase and related proteases 83 56 Op 3 . - CDS 91558 - 92604 1074 ## COG0826 Collagenase and related proteases - Prom 92745 - 92804 10.3 + Prom 92743 - 92802 10.9 84 57 Tu 1 . + CDS 92866 - 94851 2424 ## COG4389 Site-specific recombinase + Term 94875 - 94916 11.7 - Term 94967 - 94994 -0.1 85 58 Op 1 . - CDS 95002 - 95532 422 ## NMB1225 hypothetical protein 86 58 Op 2 . - CDS 95546 - 95890 131 ## gi|298369186|ref|ZP_06980504.1| conserved hypothetical protein - Prom 95940 - 95999 2.8 87 59 Tu 1 . - CDS 96088 - 98016 2782 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains - Prom 98045 - 98104 5.1 - Term 98060 - 98102 9.4 88 60 Op 1 2/0.344 - CDS 98147 - 99076 1455 ## COG0523 Putative GTPases (G3E family) 89 60 Op 2 . - CDS 99064 - 99537 508 ## COG0735 Fe2+/Zn2+ uptake regulation proteins 90 60 Op 3 . - CDS 99582 - 100409 1298 ## COG4221 Short-chain alcohol dehydrogenase of unknown specificity - Prom 100522 - 100581 5.1 + Prom 100465 - 100524 5.3 91 61 Tu 1 . + CDS 100557 - 101018 576 ## COG3909 Cytochrome c556 + Term 101070 - 101116 13.5 - Term 101060 - 101100 9.8 92 62 Op 1 . - CDS 101137 - 102411 2286 ## COG0281 Malic enzyme - Prom 102576 - 102635 4.2 93 62 Op 2 . - CDS 102648 - 103283 833 ## COG0125 Thymidylate kinase - Prom 103324 - 103383 5.3 - Term 103295 - 103360 9.1 94 63 Tu 1 . - CDS 103390 - 104385 1542 ## COG1559 Predicted periplasmic solute-binding protein - Prom 104411 - 104470 5.1 + Prom 104409 - 104468 4.6 95 64 Op 1 . + CDS 104496 - 105056 691 ## COG3023 Negative regulator of beta-lactamase expression + Prom 105066 - 105125 4.0 96 64 Op 2 . + CDS 105185 - 106444 2117 ## NMCC_0620 hypothetical protein + Term 106465 - 106503 9.3 + Prom 106456 - 106515 3.6 97 65 Tu 1 . + CDS 106591 - 109083 3079 ## COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) + Prom 109131 - 109190 5.8 98 66 Tu 1 . + CDS 109357 - 110391 1173 ## COG3049 Penicillin V acylase and related amidases + Prom 110452 - 110511 4.1 99 67 Op 1 . + CDS 110538 - 111500 655 ## gi|298369199|ref|ZP_06980517.1| conserved hypothetical protein 100 67 Op 2 . + CDS 111585 - 112457 1376 ## COG1210 UDP-glucose pyrophosphorylase + Term 112483 - 112533 20.0 - Term 112471 - 112521 20.0 101 68 Tu 1 . - CDS 112533 - 113990 1225 ## COG0168 Trk-type K+ transport systems, membrane components - Prom 114238 - 114297 4.6 + Prom 114182 - 114241 5.6 102 69 Op 1 . + CDS 114265 - 114540 442 ## PROTEIN SUPPORTED gi|241759775|ref|ZP_04757875.1| ribosomal protein L31 103 69 Op 2 . + CDS 114540 - 114665 211 ## PROTEIN SUPPORTED gi|15676834|ref|NP_273979.1| 50S ribosomal protein L36 + Term 114762 - 114789 -0.1 - Term 114805 - 114855 4.9 104 70 Op 1 2/0.344 - CDS 114907 - 115398 821 ## COG0782 Transcription elongation factor 105 70 Op 2 18/0.000 - CDS 115486 - 117027 1900 ## COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase - Prom 117061 - 117120 4.6 - Term 117084 - 117140 11.1 106 71 Op 1 . - CDS 117141 - 117644 570 ## COG1286 Uncharacterized membrane protein, required for colicin V production 107 71 Op 2 . - CDS 117661 - 118836 1072 ## NMC0643 putative tetrapac protein 108 71 Op 3 . - CDS 118848 - 120125 1543 ## COG0285 Folylpolyglutamate synthase 109 71 Op 4 . - CDS 120208 - 120549 127 ## NMB0694 FolI protein - Term 120562 - 120588 -0.3 110 72 Tu 1 . - CDS 120662 - 121021 541 ## NMC0646 hypothetical protein - Term 121045 - 121084 1.7 111 73 Op 1 2/0.344 - CDS 121095 - 121823 607 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 112 73 Op 2 . - CDS 121841 - 122620 1061 ## COG0030 Dimethyladenosine transferase (rRNA methylation) - Prom 122644 - 122703 4.0 - Term 122691 - 122745 16.9 113 74 Tu 1 . - CDS 122757 - 123353 739 ## COG0424 Nucleotide-binding protein implicated in inhibition of septum formation - Prom 123561 - 123620 4.7 + Prom 123356 - 123415 2.2 114 75 Tu 1 . + CDS 123590 - 123868 242 ## gi|298369214|ref|ZP_06980532.1| hypothetical protein HMPREF9016_00884 + Term 124080 - 124118 -0.8 - Term 123824 - 123859 1.0 115 76 Op 1 . - CDS 123899 - 124435 794 ## COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 116 76 Op 2 . - CDS 124510 - 125889 2044 ## COG0165 Argininosuccinate lyase - Prom 125933 - 125992 4.1 + Prom 125778 - 125837 6.6 117 77 Tu 1 . + CDS 125966 - 127006 1180 ## COG2972 Predicted signal transduction protein with a C-terminal ATPase domain + Term 127042 - 127080 4.0 - Term 127135 - 127181 14.4 118 78 Tu 1 . - CDS 127195 - 127941 1140 ## COG0765 ABC-type amino acid transport system, permease component - Prom 127976 - 128035 4.0 119 79 Op 1 . + CDS 128282 - 129634 2317 ## COG0826 Collagenase and related proteases 120 79 Op 2 . + CDS 129687 - 129887 382 ## gi|255067577|ref|ZP_05319432.1| conserved hypothetical protein + Prom 129906 - 129965 5.5 121 80 Op 1 32/0.000 + CDS 130115 - 130852 396 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 122 80 Op 2 . + CDS 130854 - 131540 1316 ## COG2011 ABC-type metal ion transport system, permease component + Term 131558 - 131607 1.3 123 81 Op 1 . + CDS 131618 - 132073 459 ## gi|298369224|ref|ZP_06980542.1| ATPase 124 81 Op 2 . + CDS 132140 - 133057 1534 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen + Term 133068 - 133129 23.3 - Term 133049 - 133117 13.5 125 82 Op 1 . - CDS 133137 - 133616 539 ## VCM66_A0409 hypothetical protein - Term 133655 - 133689 3.1 126 82 Op 2 . - CDS 133705 - 134493 1124 ## NGK_2004 hypothetical protein - Prom 134555 - 134614 6.0 + Prom 134501 - 134560 3.1 127 83 Op 1 . + CDS 134589 - 134840 401 ## NMB1611 hypothetical protein + Prom 134849 - 134908 7.2 128 83 Op 2 . + CDS 134953 - 135768 1302 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Term 135796 - 135840 13.1 - Term 135780 - 135835 2.1 129 84 Tu 1 . - CDS 135845 - 137140 1890 ## COG0172 Seryl-tRNA synthetase - Prom 137167 - 137226 5.8 - Term 137228 - 137274 8.3 130 85 Tu 1 . - CDS 137303 - 139687 3426 ## COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase + Prom 139937 - 139996 6.2 131 86 Tu 1 . + CDS 140104 - 140925 1178 ## COG1806 Uncharacterized protein conserved in bacteria 132 87 Tu 1 . - CDS 141027 - 141422 430 ## gi|298369233|ref|ZP_06980551.1| hypothetical protein HMPREF9016_00903 - Prom 141479 - 141538 3.9 - Term 141644 - 141682 10.2 133 88 Tu 1 . - CDS 141897 - 143597 2631 ## COG0608 Single-stranded DNA-specific exonuclease - Prom 143632 - 143691 5.2 - Term 143638 - 143686 12.8 134 89 Op 1 . - CDS 143721 - 144593 533 ## XCV4417 hypothetical protein 135 89 Op 2 . - CDS 144610 - 144915 439 ## gi|298369236|ref|ZP_06980554.1| hypothetical protein HMPREF9016_00906 - Prom 144983 - 145042 2.0 136 90 Tu 1 . - CDS 145093 - 145404 198 ## gi|298369237|ref|ZP_06980555.1| conserved hypothetical protein - Prom 145483 - 145542 3.1 137 91 Tu 1 . - CDS 145648 - 146181 891 ## COG3028 Uncharacterized protein conserved in bacteria - Prom 146286 - 146345 1.9 + Prom 146236 - 146295 5.0 138 92 Op 1 . + CDS 146315 - 147646 1794 ## COG0312 Predicted Zn-dependent proteases and their inactivated homologs 139 92 Op 2 1/0.406 + CDS 147699 - 148571 1070 ## COG1562 Phytoene/squalene synthetase 140 92 Op 3 . + CDS 148568 - 149890 1928 ## COG2907 Predicted NAD/FAD-binding protein 141 93 Tu 1 . + CDS 149994 - 150536 643 ## COG1714 Predicted membrane protein/domain - Term 150784 - 150827 13.3 142 94 Op 1 . - CDS 150882 - 151631 918 ## COG0491 Zn-dependent hydrolases, including glyoxylases 143 94 Op 2 . - CDS 151656 - 152762 1236 ## Arad_12046 hypothetical protein - Prom 152813 - 152872 4.2 - Term 153027 - 153090 -0.1 144 95 Tu 1 . - CDS 153118 - 153903 518 ## COG3440 Predicted restriction endonuclease - Prom 153927 - 153986 5.0 - Term 154120 - 154148 -0.9 145 96 Tu 1 . - CDS 154202 - 158098 4950 ## COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain - Prom 158126 - 158185 5.1 146 97 Tu 1 . + CDS 158441 - 158779 657 ## COG0347 Nitrogen regulatory protein PII + Term 158801 - 158836 5.1 + Prom 159112 - 159171 4.0 147 98 Tu 1 . + CDS 159249 - 163082 5360 ## COG0277 FAD/FMN-containing dehydrogenases + Term 163229 - 163279 0.2 - Term 163140 - 163167 -0.9 148 99 Tu 1 . - CDS 163178 - 164212 1604 ## COG0418 Dihydroorotase 149 100 Op 1 . - CDS 164295 - 164885 601 ## NMA0883 putative lipoprotein 150 100 Op 2 . - CDS 164904 - 165125 342 ## COG0425 Predicted redox protein, regulator of disulfide bond formation - Prom 165148 - 165207 4.2 + Prom 165097 - 165156 5.7 151 101 Tu 1 . + CDS 165229 - 165834 1020 ## NMCC_0636 periplasmic protein + Term 165855 - 165896 10.0 + Prom 165862 - 165921 3.6 152 102 Tu 1 . + CDS 165958 - 166377 491 ## COG0789 Predicted transcriptional regulators + Term 166393 - 166430 6.1 - Term 166375 - 166423 9.8 153 103 Op 1 . - CDS 166438 - 167562 1577 ## COG3203 Outer membrane protein (porin) - Prom 167589 - 167648 4.7 154 103 Op 2 . - CDS 167652 - 167936 352 ## gi|298369255|ref|ZP_06980573.1| non-ribosomal peptide synthetase 155 103 Op 3 . - CDS 167929 - 168342 484 ## gi|298369256|ref|ZP_06980574.1| conserved hypothetical protein - Term 168363 - 168399 8.2 156 103 Op 4 . - CDS 168415 - 168849 704 ## gi|298369257|ref|ZP_06980575.1| hypothetical protein HMPREF9016_00927 - Prom 168907 - 168966 7.1 - Term 168972 - 169021 10.3 157 104 Op 1 39/0.000 - CDS 169050 - 169940 1723 ## COG0074 Succinyl-CoA synthetase, alpha subunit 158 104 Op 2 . - CDS 169951 - 171117 1854 ## COG0045 Succinyl-CoA synthetase, beta subunit 159 104 Op 3 . - CDS 171215 - 171502 345 ## NGK_0886 membrane protein - Prom 171526 - 171585 2.9 - Term 171642 - 171677 6.0 160 105 Tu 1 . - CDS 171701 - 173134 822 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 - Prom 173281 - 173340 2.8 - Term 173309 - 173341 0.1 161 106 Tu 1 . - CDS 173419 - 173688 448 ## gi|298369262|ref|ZP_06980580.1| conserved hypothetical protein - Term 173808 - 173849 0.2 162 107 Op 1 21/0.000 - CDS 173882 - 175063 1667 ## COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes 163 107 Op 2 2/0.344 - CDS 175176 - 177998 3742 ## COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes - Prom 178150 - 178209 3.6 - Term 178174 - 178221 2.3 164 108 Op 1 2/0.344 - CDS 178231 - 179517 1738 ## COG0372 Citrate synthase - Term 179529 - 179554 -0.1 165 108 Op 2 4/0.156 - CDS 179608 - 179856 316 ## COG2938 Uncharacterized conserved protein 166 108 Op 3 36/0.000 - CDS 179860 - 180567 965 ## COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit - Prom 180595 - 180654 2.8 167 108 Op 4 22/0.000 - CDS 180696 - 182459 2203 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 168 108 Op 5 24/0.000 - CDS 182462 - 182803 413 ## COG2142 Succinate dehydrogenase, hydrophobic anchor subunit 169 108 Op 6 . - CDS 182797 - 183174 415 ## COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit - Prom 183256 - 183315 3.9 + Prom 183466 - 183525 5.4 170 109 Tu 1 . + CDS 183553 - 183924 294 ## COG3339 Uncharacterized conserved protein + Term 183946 - 183996 14.2 - Term 183938 - 183979 12.0 171 110 Tu 1 . - CDS 184003 - 184518 634 ## NGO1251 hypothetical protein - Prom 184618 - 184677 3.3 - Term 184723 - 184751 1.4 172 111 Op 1 . - CDS 184776 - 185708 807 ## PROTEIN SUPPORTED gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 - Prom 185735 - 185794 3.7 173 111 Op 2 . - CDS 185803 - 186399 503 ## NMC0714 putative integral membrane protein 174 111 Op 3 . - CDS 186416 - 187264 807 ## COG0253 Diaminopimelate epimerase - Prom 187456 - 187515 7.4 + Prom 187709 - 187768 5.5 175 112 Tu 1 . + CDS 187891 - 188238 627 ## gi|298369276|ref|ZP_06980594.1| TonB protein + Term 188263 - 188301 5.9 + Prom 188304 - 188363 2.5 176 113 Op 1 7/0.094 + CDS 188396 - 189451 1478 ## COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis 177 113 Op 2 . + CDS 189467 - 189682 333 ## COG2991 Uncharacterized protein conserved in bacteria + Term 189708 - 189754 15.2 + Prom 189845 - 189904 8.6 178 114 Tu 1 . + CDS 189925 - 190002 123 ## + Term 190076 - 190114 3.3 179 115 Tu 1 . + CDS 190268 - 190444 111 ## + Term 190626 - 190685 -0.6 - Term 190338 - 190373 1.1 180 116 Tu 1 . - CDS 190479 - 191468 1758 ## COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase - Prom 191488 - 191547 5.3 + Prom 191775 - 191834 7.8 181 117 Tu 1 . + CDS 192042 - 192830 1315 ## COG4558 ABC-type hemin transport system, periplasmic component + Term 192877 - 192917 3.3 + Prom 193018 - 193077 3.4 182 118 Op 1 35/0.000 + CDS 193149 - 194090 1344 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 183 118 Op 2 1/0.406 + CDS 194139 - 194864 174 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 194942 - 194986 7.1 + Prom 194904 - 194963 6.5 184 119 Tu 1 . + CDS 194990 - 196810 2658 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases + Prom 197106 - 197165 2.5 185 120 Tu 1 . + CDS 197316 - 197936 1043 ## COG0702 Predicted nucleoside-diphosphate-sugar epimerases + Term 197955 - 197999 15.5 + Prom 198023 - 198082 9.6 186 121 Tu 1 . + CDS 198279 - 201458 4134 ## COG1629 Outer membrane receptor proteins, mostly Fe transport + Prom 201691 - 201750 14.5 187 122 Op 1 . + CDS 201923 - 202807 1002 ## PAU_01244 hypothetical protein 188 122 Op 2 . + CDS 202930 - 203817 813 ## PAU_01244 hypothetical protein 189 122 Op 3 . + CDS 203907 - 205373 2078 ## XBJ1_4406 hypothetical protein + Term 205456 - 205511 11.7 - Term 205452 - 205491 10.0 190 123 Tu 1 . - CDS 205510 - 207090 2560 ## COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) - Prom 207127 - 207186 5.3 191 124 Op 1 . - CDS 207246 - 208121 831 ## PROTEIN SUPPORTED gi|42631297|ref|ZP_00156835.1| COG0697: Permeases of the drug/metabolite transporter (DMT) superfamily 192 124 Op 2 . - CDS 208131 - 208643 574 ## COG0038 Chloride channel protein EriC Predicted protein(s) >gi|289656352|gb|ADEA01000015.1| GENE 1 2 - 982 772 326 aa, chain + ## HITS:1 COG:YPO3609 KEGG:ns NR:ns ## COG: YPO3609 COG3209 # Protein_GI_number: 16123751 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Yersinia pestis # 1 201 132 326 456 170 45.0 3e-42 WREGGKEIWRYEYDALDRRIAKEQVEVGEEHRPAADGKGRLKTVPGNRIEFVWDGSHLLQ EIHPHGSYTYVYTDQDSYEPLAQICEWEDEAGETRRQVNYFHCDQIGLPREMTDGEGRLL WFGNYGGWGKLTEETNIANAHQPFRLQNQYCDGETGLHYNFFRYYDPHSGRFVTQDPIGL WGGENLYIFSPNSQMWIDPLGLSPIIPIGMAIAAALGRFGIKFGTKALSKAKNIRRTKHV NNRHIDRTKYPGRCSTNPNGKSKFKKPSMRTKLEDATLTNPDKIIQQGNRLRFEKDFGRE IGTNGETKLRVILDPIKKKIITSFPE >gi|289656352|gb|ADEA01000015.1| GENE 2 1005 - 1271 262 88 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298369107|ref|ZP_06980425.1| ## NR: gi|298369107|ref|ZP_06980425.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 88 1 88 88 167 100.0 1e-40 MIEFFYNTDSLIKKIYVNPDEENIEAMINVLRQRTGIFIDPYGDTKLYPSHQKILIAYLE KFPRKNIELVNFLKESSALDTIVYCVGD >gi|289656352|gb|ADEA01000015.1| GENE 3 1311 - 1814 171 167 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298369108|ref|ZP_06980426.1| ## NR: gi|298369108|ref|ZP_06980426.1| hypothetical protein HMPREF9016_00777 [Neisseria sp. oral taxon 014 str. F0314] # 1 167 1 167 167 310 100.0 3e-83 MINTNGFWLENALYVMDKEGSLLRGMYQPTTDGKGRLKTVPCIRTEFVGKFIMKIKVIML SIIGLILSGHSLANEEIKFDDIWNFKISVKENRNNKQIRLTGLLGNSAMGISDIKTNIHN DELNIILFQKLAGSKYSGRLDKEVTVEKSIKKITFGSKKKILWENKP >gi|289656352|gb|ADEA01000015.1| GENE 4 2625 - 2765 105 46 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPEGIDEKVYIYSCLNGKLSPDILSIEEFDSLISSWLIKNKNGIKK >gi|289656352|gb|ADEA01000015.1| GENE 5 2925 - 3392 216 155 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298369109|ref|ZP_06980427.1| ## NR: gi|298369109|ref|ZP_06980427.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 155 21 175 175 278 100.0 5e-74 MPTIYQIPYRQLPLQGIVSNQYKNDRYVMSEYGDDFGYYENTDINKVNIDEHHLVSWTFF SSEGINYLLPRIIINIQLNVSDIPTNLQSFITDLIYQKNLKDSLQYLNRDELTTMKNFFE WLLFDKPEALKILGENTLINNASYIENLINHNSPS >gi|289656352|gb|ADEA01000015.1| GENE 6 3413 - 3568 193 51 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQEKDRIKCSKQCISIKKFAAIGATVTAASFLIKTIVGGEEHSVFSNSSCE >gi|289656352|gb|ADEA01000015.1| GENE 7 3579 - 3944 144 121 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298369110|ref|ZP_06980428.1| ## NR: gi|298369110|ref|ZP_06980428.1| cytochrome c biogenesis protein [Neisseria sp. oral taxon 014 str. F0314] # 1 121 1 121 121 167 100.0 2e-40 MFAAINKFIRKYWLSILIWWFLFSVFLAYYGTLDFTFKLLGVPIISFFLVILFHLELERK NIKYLSIIQMLIGMLLGLAIQIKRENFMLFEGLIFGGIWGLITPLWVKIFMFLREKIGNY V >gi|289656352|gb|ADEA01000015.1| GENE 8 4656 - 5696 1512 346 aa, chain - ## HITS:1 COG:NMB1395 KEGG:ns NR:ns ## COG: NMB1395 COG1063 # Protein_GI_number: 15677256 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Neisseria meningitidis MC58 # 1 346 1 346 346 689 97.0 0 MKAMVYHGANDIRFEEKPRPQIIDPTDAVVKIVKTTICGTDLGIWKGKNPEVADGRILGH EGIGIVEEVGEAVKNIKVGDKVIISCVSKCCTCDNCKIQLYSHCRNGGWILGYMIDGTQA EYVRTPYADNSLVPLPDNVNEEVALLLSDALPTAHEIGVQYGDVKPGDTVFIAGAGPVGM SALLTAQLYSPAAIIVCDMDENRLKLAKELGATYTISPASGDVSKQVFAIVGEDGVDCAI EAVGIPATWNMCQDIVKPGGHIAVVGVHGQSVDFKLEKLWIKNLAITTGLVNANTTEMLM KAISSSSVDYTKMLTHRFKFSELEKAYDVFKHAAENQAMKVVLEAD >gi|289656352|gb|ADEA01000015.1| GENE 9 5875 - 6924 661 349 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|46129221|ref|ZP_00155777.2| COG1194: A/G-specific DNA glycosylase [Haemophilus influenzae R2846] # 4 341 8 364 378 259 40 9e-68 MNTSSSFAERLIRWQRQHGRHDLPWQVQNPYCVWLSEIMLQQTQVATVLDYYPRFLEKFP TVQTLAAALQDEVLSLWAGLGYYSRARNLHKAAQQVVGQFGGTFPSERKDLETLCGVGRS TAAAICAFAFNRRETILDGNVKRVLCRVFARDGNPQDKKFENSLWTLAESLLPSENADMP AYTQGLMDLGATVCKRTKPLCHQCPMADICEAKKQNRIAELPRKKTALEVQTLPLYWLIV RNQDGAILLEKRPAKGIWGGLYCVPCFETLNEAYAYTEKLGIASDGLEEQPALTHRLTHR LLMITPFQTPQRPSENLSDGLWVSPEHLADYGLPKPLSDYLNRPQSDLF >gi|289656352|gb|ADEA01000015.1| GENE 10 6992 - 7861 1423 289 aa, chain - ## HITS:1 COG:NMB0711 KEGG:ns NR:ns ## COG: NMB0711 COG1561 # Protein_GI_number: 15676609 # Func_class: S Function unknown # Function: Uncharacterized stress-induced protein # Organism: Neisseria meningitidis MC58 # 3 289 8 294 294 395 74.0 1e-110 MTVNSMTGFANAAGECGGKRINLEIRAVNHRYLDVQFRMPDDLRHLEGTLREQIAAQAAR GKLECRIQVQDVAQGAQGLDVNQDLVAQLADLNKLWRKEHGFGKLSVAEVLKFPGVLAVQ TEDAEAFAKAVQALLARALKEFAAARKREGKKLGEHLLQRLDGMEEIVDALGELFPSLLQ AHMDKVNARLAEAVGNIDNDRLQQEFALFIQKSDVDEEFSRLRTHIAEVRRIVTEGKGSA GKRLDFLMQELNREANTLGSKAIAAECTQASVELKVLIEQMREQVQNIE >gi|289656352|gb|ADEA01000015.1| GENE 11 7947 - 8687 1094 246 aa, chain + ## HITS:1 COG:NMA1702 KEGG:ns NR:ns ## COG: NMA1702 COG0689 # Protein_GI_number: 15794595 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RNase PH # Organism: Neisseria meningitidis Z2491 # 1 242 1 242 242 409 89.0 1e-114 MSHYTRTGRAADSLRDIKITPHFLPHADGSCLIECGNTKVICTASVDENVPPFLRGKEQG WVTAEYGMLPASTATRMRREAAAGKQSGRTQEIQRLIGRSLRAVVDMEKLGERQILIDCD VIQADGGTRTASITGAFVALQIAVEKLLSDGLIGENPIREAVAAVSAGVVGGVPLLDLDY PEDSGCDSDVNIVMTASGKIIEIQGTAEGAPFSLDELGKLIALAQKGIAELVRHQQNALQ TSRPVR >gi|289656352|gb|ADEA01000015.1| GENE 12 8928 - 10148 2121 406 aa, chain + ## HITS:1 COG:NMB1498 KEGG:ns NR:ns ## COG: NMB1498 COG0527 # Protein_GI_number: 15677351 # Func_class: E Amino acid transport and metabolism # Function: Aspartokinases # Organism: Neisseria meningitidis MC58 # 1 405 1 405 405 680 92.0 0 MALIVQKYGGTSVGSPERIKNVANRVAKARAEGHDVVVVVSAMSGETNRLVALAHEMQEH PDPRELDVVLATGEQVTIGLLAMALKNIGVDAKSYTGWQVALKTDTAHTKARIESIDDEK MRADLAKGRVVIVAGFQGVSSTGDISTLGRGGSDTSAVALAAALKADECQIYTDVDGVYT TDPRVVPEARRLNTITFEEMLELASLGSKVLQIRSVEFAGKYKVRLRVLSSLQEGGDGTL ITFEEDDNMEKAAVTGIAFDKNQARINVRGVPDKPGVAYQILGAVADTNVEVDMIIQNVG SEGTTDFSFTVPRGDYKQTLDLLNGLKDSIGATAIDGDDTVCKVSAVGMGMRSHAGVAAK IFRTLAEEGINIQMISTSEIKVSVLIDEKYMELATRVLHKAFDLGK >gi|289656352|gb|ADEA01000015.1| GENE 13 10258 - 11538 1840 426 aa, chain - ## HITS:1 COG:NMA1687 KEGG:ns NR:ns ## COG: NMA1687 COG0334 # Protein_GI_number: 15794580 # Func_class: E Amino acid transport and metabolism # Function: Glutamate dehydrogenase/leucine dehydrogenase # Organism: Neisseria meningitidis Z2491 # 6 426 1 421 421 800 94.0 0 MKRKDMSHSATKETLNPFEIAQKQVKTACDRLNADPAVYEILKNPQRVLEVTFPVKLDNG TVKTFTGYRSQHNNAVGPYKGGVRFHPNVNLDEVKALSIWMTIKCCVAGIPYGGGKGGIT LDPRDYSEAELERISRAYSEAISPLIGEKIDIPAPDVNTNGKIMSWMVDAYENVVKKSAP GVFTGKPVEFGGSLARTEATGYGVNFAAVQALEKLGKDVKGATYAIQGFGNVGYHTGYYA HQSGAKVVAVSTVDVAIYNENGLDMEALFKEYQANGFITNKAGYGKEICNAELLALDVDV LAPCALENQLTSENAGKVRAKIVVEGANGPTTPEADAILRQNGVLVVPDILANCGGVVVS YFEWVQNLQGYYWEFDEVQEKETVVLRRAFRDIWNLAQEYDVDLRTASYMMSIRRVEKAM KLRGWY >gi|289656352|gb|ADEA01000015.1| GENE 14 11792 - 12502 1340 236 aa, chain + ## HITS:1 COG:NMA1688 KEGG:ns NR:ns ## COG: NMA1688 COG0546 # Protein_GI_number: 15794581 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Neisseria meningitidis Z2491 # 1 235 1 235 235 399 86.0 1e-111 MTPTIDHVQAAAFDLDGTLCDSVPDLAAAAEAMREYLGMRPLPAKTVESYIGDGIGKLVH RVITDDRDQEAAPDLWEKGFVFYMKYYRDHLSDFTRSYPETEAGLALLKTLGIPLVVITN KNEILAAELLKQLGLADYFSLILGGDSLPEKKPSPLPLQHAAEVLGIDTANMIMVGDSRN DILAAKAAGCLSVGVTYGYGDMTLLSQDKATKPDWIIGSLPEIYESLQPQKAKDEE >gi|289656352|gb|ADEA01000015.1| GENE 15 12566 - 13036 636 156 aa, chain + ## HITS:1 COG:NMA1689 KEGG:ns NR:ns ## COG: NMA1689 COG2137 # Protein_GI_number: 15794582 # Func_class: R General function prediction only # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 148 1 148 153 175 81.0 2e-44 MKPQKSLRARAMDILSRQETSRIGLKRKLAPYAESEEELENVLDEFAERNWQSDQRYAEA YIHSKSRRQGRLRLQQALAAQGVDEAISRSLMPRREDELRTAVAILRKKFRQSAADLKEK QKQARFLTYRGFDADTVQTALKTAWDENNGYGEDSF >gi|289656352|gb|ADEA01000015.1| GENE 16 13126 - 13296 342 56 aa, chain + ## HITS:1 COG:no KEGG:NGO1054 NR:ns ## KEGG: NGO1054 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae # Pathway: not_defined # 7 56 5 53 53 68 70.0 9e-11 MSDNRIPDKQTAGLLPEDESKNPVFRLGRAVAGFMLLVWAGVLLLVFYLVFRFWFA >gi|289656352|gb|ADEA01000015.1| GENE 17 13361 - 14431 1693 356 aa, chain - ## HITS:1 COG:NMA1760 KEGG:ns NR:ns ## COG: NMA1760 COG0795 # Protein_GI_number: 15794653 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Neisseria meningitidis Z2491 # 1 356 1 356 356 523 72.0 1e-148 MKLIPRYIIRQMSVMAVYALLAFLALYSFFEVINEMGDVGKGSYTGAKMVQYVLMQMPAR AYELMPLGVLIGGLIALSQLASGSELTVIKASGMSTKRLLAVLSQFGLIFALATVVLGEW VAPDLSRRAENMKASAINGRISAGASGLWMKEQNNIINVREMLPDHTLLGVKIWQHDDRY QLASAAEAESAALNPDGSWQLKNVSRSVLKGEQVAVSSESSQRWPVALQSGLLDVLLVDP DQMSVSELTTYIAHLKSNHQKTDTYSVAWWRKLMYPIAAWVMALVAFAFTPQTTRHGNMG LKLFGGICLGLVFHFAGRLFGFTSQLYSVPPFLAGMLPTVIFALLAVYLIRRQERR >gi|289656352|gb|ADEA01000015.1| GENE 18 14428 - 15543 1659 371 aa, chain - ## HITS:1 COG:NMA1759 KEGG:ns NR:ns ## COG: NMA1759 COG0795 # Protein_GI_number: 15794652 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Neisseria meningitidis Z2491 # 1 371 1 371 371 640 88.0 0 MIYQRNFIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAVDAVAALVGFWVIGMT PLLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFALLIAVMQLWV MPWAELRSREYAEILKQKQELSLVEAGEFNSLGKRSDRVYFVETFDTESGIMKNLFLREL DKNGNDNIIFAKEGNFALTDNKRTLELRNGYRYSGKPGRADYNQVSFEHLSMIISTTPKI VDPIAHRRTIPTAKLFGSDNPQYQAELMWRLSLPISVLLLSMLAVPLSYFNPRTGHTYNI LIAIGMFLIYQNGLTFLRDAVEDGKIHFWFGMLPMHILMIVIAVVLLRVRSMPAQPFWQA VGKSLTLKGGK >gi|289656352|gb|ADEA01000015.1| GENE 19 15741 - 17150 2248 469 aa, chain + ## HITS:1 COG:NMA1758 KEGG:ns NR:ns ## COG: NMA1758 COG0260 # Protein_GI_number: 15794651 # Func_class: E Amino acid transport and metabolism # Function: Leucyl aminopeptidase # Organism: Neisseria meningitidis Z2491 # 1 468 1 468 468 803 95.0 0 MEFSTKAGTLQPQQAGAQLFVCTEEAQLNHPTALALLSSLEEGQTFADTKIPTDNGLQAV AVVRLEKTDRAALNKAAAEAAKWAQNQETVNADIHAFDEAQAAAVAEAFAIAFGNAAYRF DRYKKEAKPAKFAQAVFHTAHEAAVKEALRVAEAQVYGQSLCRDLGNAAPNECTPEFLAR TAKAEAEKLGAHAKIIEKDYIKENMGSFWSVAKGSVEDPYLIELSYFGAADKEAAPVVLV GKGITFDTGGISLKPGLNMDEMKFDMCGAATVISTFCAAVKLQLPINLVAVVATCENMPS GAANKPGDVVKSMKGLTIEVLNTDAEGRLILCDALTYAEQFKPKAVIDVATLTGACIIAL GHDVSGVMGNNQDLVDSLLAASRNVDDKAWQLPLFETYKDQLKSNFADIPNIGTPGAGTI TAATFLSYFTEDYPWAHLDIAGTAWKSGSEKGATGRPVPLLLNYLRNVK >gi|289656352|gb|ADEA01000015.1| GENE 20 17247 - 17729 821 160 aa, chain + ## HITS:1 COG:FN0550 KEGG:ns NR:ns ## COG: FN0550 COG0662 # Protein_GI_number: 19703885 # Func_class: G Carbohydrate transport and metabolism # Function: Mannose-6-phosphate isomerase # Organism: Fusobacterium nucleatum # 34 156 17 139 141 144 58.0 9e-35 MKPLFAALSVAFLLGTTVSVHAAEQAKPTDRSVQVYKKADLAEWNRENAAGGKGPLLGRF AFNRHQTAAQDAFREIGWLTLPPGASIGEHKHTDNEDVYIIVSGKGVFTDSTGKQTQVGA GDITIARPGQSHALKNIGKEPLVFLDLIAETAAKSAAAKK >gi|289656352|gb|ADEA01000015.1| GENE 21 17805 - 18242 637 145 aa, chain + ## HITS:1 COG:NMA1757 KEGG:ns NR:ns ## COG: NMA1757 COG2927 # Protein_GI_number: 15794650 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, chi subunit # Organism: Neisseria meningitidis Z2491 # 1 145 1 146 146 174 61.0 6e-44 MPKATFYTHVAEPAVFSCRLAARAMRDSHVLVWSDSAETVARIDRDLWQFDPESFIPHEI WPTGSPVPSETPVLLASGFELPELPHGFAVLNLSPDFLSDAPAPPVRVFEIVGTGLEELA EARERFKAYRGRGFEIEHFDMNGKA >gi|289656352|gb|ADEA01000015.1| GENE 22 18394 - 19209 1360 271 aa, chain + ## HITS:1 COG:NMB1567 KEGG:ns NR:ns ## COG: NMB1567 COG0545 # Protein_GI_number: 15677418 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerases 1 # Organism: Neisseria meningitidis MC58 # 1 262 1 264 272 285 69.0 5e-77 MNKTFKLSALALAAALTVTACNKKDAAAPAASAPAASGAEASAIGTPAQQASYAMGVDIG RSLKQMKDQGTDIDLKVFNEAIQTMYDGKEPKMNEMQAQEVMLKFLQEQQTKAQAKRLED AKTNLEKGDAFLKENASKEGVKTTASGLQYKVKTEGTGASPKATDIVTVEYEGRLIDGTV FDSSKQNGGQPVTFPVNQVIPGWSEAVQLMKEGGEATFFIPAKLAYGENGAGDKIAPNAT LIFDVKLLKVGKPESMPAAPSAAEASGQKSQ >gi|289656352|gb|ADEA01000015.1| GENE 23 19502 - 20128 770 208 aa, chain + ## HITS:1 COG:NMB1566 KEGG:ns NR:ns ## COG: NMB1566 COG0299 # Protein_GI_number: 15677417 # Func_class: F Nucleotide transport and metabolism # Function: Folate-dependent phosphoribosylglycinamide formyltransferase PurN # Organism: Neisseria meningitidis MC58 # 1 208 1 208 208 356 86.0 2e-98 MKNIVILISGRGSNMQAIVNAGIPDVRIAAVLSNSATAAGLAWAAERGIPTDSLNHKDFA SRGAFDQAMMEKIDAYQPDLVVLAGFMRILTPEFCTRYEGRLMNIHPSILPSFTGLHTHE RALAAGCRVAGCTIHFVTPELDCGPIISQGVVPIFDNDTADDIAARVLKVEHRLFPQAVA DFAAGRLKIEGNRVINSRNQPEDRPLLA >gi|289656352|gb|ADEA01000015.1| GENE 24 20185 - 20862 1070 225 aa, chain + ## HITS:1 COG:no KEGG:NGK_0287 NR:ns ## KEGG: NGK_0287 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 7 222 10 223 223 239 61.0 4e-62 MNTTKATALLLTVFSLSAAASELPHSAVLKYSGSYGIPAVMTFTRNGNSYKIVSSIKVPL YKIRFESAGTISDGILYPSYYKDIRGGKLYAEAKFNGHSVTYGRIKEGEETETVSGPTMD LFTLAWQLAAGDGKLPAGTRITNGKKLYRINSINKTGSSKYKFGKGYIDIDKYRVRRGDS TVGYAFATAFDNIPAQISYTDDGKTYNLRLTGATIDGKPVQPQQP >gi|289656352|gb|ADEA01000015.1| GENE 25 20945 - 21691 870 248 aa, chain - ## HITS:1 COG:NMB0535 KEGG:ns NR:ns ## COG: NMB0535 COG0738 # Protein_GI_number: 15676441 # Func_class: G Carbohydrate transport and metabolism # Function: Fucose permease # Organism: Neisseria meningitidis MC58 # 2 246 180 426 426 306 72.0 2e-83 MLILADAGQTASKAEQISSVQIPYLGLAGVLILLAVFVKMIKLPDARKIAEEVTEHSHDG KTSVWQYKHLILGALGIFCYVGAEVSIGSLLVSVMEVTAGLDHATGARLLSVYWGGAMVG RFLGALLMQRIAPSKYLAFNATAAVVLIAVAILFGGGKVSMWALLFIGFFNSIMFPTIFS LATSGLGKFTGAASGIICTAIVGGAIVPVMQGFFADHIGLLLSFFVSALCYLYILFFAVK GHKADEAA >gi|289656352|gb|ADEA01000015.1| GENE 26 21748 - 22170 549 140 aa, chain - ## HITS:1 COG:NMB0535 KEGG:ns NR:ns ## COG: NMB0535 COG0738 # Protein_GI_number: 15676441 # Func_class: G Carbohydrate transport and metabolism # Function: Fucose permease # Organism: Neisseria meningitidis MC58 # 1 134 20 154 426 204 82.0 5e-53 MSTPSQQNNNTALSVLTALFFMMGFITCLNDILIPHLKAIFDLSYVQAMLVQFCFFTAYA VMSIPMGKLVGKIGYKGGVIGGFLLTAVGCLLFYPAADSASYPTFLAALFILASGVTLLQ VAGNPYVTLLSPGRARNLPR >gi|289656352|gb|ADEA01000015.1| GENE 27 22454 - 23311 1109 285 aa, chain - ## HITS:1 COG:NMA1605 KEGG:ns NR:ns ## COG: NMA1605 COG1737 # Protein_GI_number: 15794500 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Neisseria meningitidis Z2491 # 1 276 1 276 282 461 89.0 1e-130 MLSKISESLSNLSGAERKVAEWALAEPKWFVHAAVAEIAERASVSQPTVIRFCRSLGYKG LPEFKLALSASIGHEGMPYVHEELNADDDMASVVEKVLSNTAASILGERRVLQESELENA VAMLLHARRVEFYGVGNSGIVAQDAQHKFFRFGISTVAYVDTHTQLMAAAVLTDKDVLVA VSNSGSSIELLDAVSIAKENGTSVIAITRNDSPLAQLADCVLSIATQENIEVYTPMVSRL LQLAVIDILAIGLALRLGEPASQQLKKGKRSIYGKHKHHLETHKD >gi|289656352|gb|ADEA01000015.1| GENE 28 23429 - 24460 1403 343 aa, chain - ## HITS:1 COG:NMA1607 KEGG:ns NR:ns ## COG: NMA1607 COG0837 # Protein_GI_number: 15794501 # Func_class: G Carbohydrate transport and metabolism # Function: Glucokinase # Organism: Neisseria meningitidis Z2491 # 1 340 1 328 328 497 73.0 1e-140 MSTTQNKPVTKNKPVTNQPSTSWPRMVADIGGTNARFALEVAPQQIEQAEVLPCHDYDTI IDATREFLKRVGNPKISHAAVAIANPILGDWVQMTNHHWSFSIETTRQSLGLETLILLND FTAQALAITQTKREDLVQVGGKELVENAPKAVIGPGTGLGVSGLVPSKAGWVPLSGEGGH VSFPPFDDAEVMIWQYAKKKYGHVSAERFLSGSGLTLIYEALAVKEGLKPKKLTPAEISE NALSGSSPLCRLTLDMFCAMLGTVASNLALTLGASGGVYLCGGIIPRFIDYFKSSPFRNR FENKGRFDAYLASIPVYVVLSKFPGLIGSAVALDNHLQGLGGE >gi|289656352|gb|ADEA01000015.1| GENE 29 24441 - 25136 199 231 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163781723|ref|ZP_02176723.1| 50S ribosomal protein L13 [Hydrogenivirga sp. 128-5-R1-1] # 1 222 1 206 228 81 29 3e-14 MFTWHENDNAAAAAQSLADAVAAAMQSTLDEKGRAVLAVSGGRSPIAFFEALSHKDLAWS NVGITLVDERIVPTVHPDSNTALVREYLLKNKASAARWIPMVEDGKPENRLPPQEVVDFA LQHYRQPDVLVLGMGGDGHTASLFPQAPQLEAGIDLENDVTLLHTTPVTAPHERVSMTLG AILKTPHIFLAIQGADKKAVFERAAAAPTTEFPISLILNQNGANCHVYYAK >gi|289656352|gb|ADEA01000015.1| GENE 30 25316 - 26761 1999 481 aa, chain - ## HITS:1 COG:NMB1392 KEGG:ns NR:ns ## COG: NMB1392 COG0364 # Protein_GI_number: 15677253 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-phosphate 1-dehydrogenase # Organism: Neisseria meningitidis MC58 # 1 481 1 481 481 795 79.0 0 MNTQTNFDLILFGATGDLAMRKLLPCLYQAHVAGLLHPEGRILGVSRSKFDTAEFLAKVE TNSKIHIKNHFSEAQWQSFVDRITYLSLNVTEPEDFVRLGEAVKERAVPKDIVIYLSTAP KFFAQACENLAAVGLNADNVRVVLEKPLGTDLQSSREINDDVARFYREDQIYRIDHYLGK ESLQNLLALRFANVVLEPLWNHKYIKSVQLTIAEQLGVEERGEFYDITGALRDMVQNHLL QMLCMTAMEPPASLDADAVRNEKVKVLKALKPMTSADVDKNVVRGQYIAAGGMNGYLQEV NVPSDSTTETYVAIRAEIDTPRWAGVPFYLRTGKRMADKVAEIVLNFRELDNRIFENSIS VPNRLVIELQPDEAVRLYMQVKTPGVGNTVEIAPLDMDLGKAAEGHRAEAYERLLLDVID GKLALFNRRDELEAAWEYVMPILENWASSATPPHGYAAHSWGPEAARELLARNGDKWHEE Q >gi|289656352|gb|ADEA01000015.1| GENE 31 27187 - 29019 2997 610 aa, chain + ## HITS:1 COG:NMA1610 KEGG:ns NR:ns ## COG: NMA1610 COG0129 # Protein_GI_number: 15794504 # Func_class: E Amino acid transport and metabolism; G Carbohydrate transport and metabolism # Function: Dihydroxyacid dehydratase/phosphogluconate dehydratase # Organism: Neisseria meningitidis Z2491 # 2 610 29 637 637 1209 97.0 0 MTTPIHPKLAEITERIIERSRPTRKKYLAKIRSAKQMGQLERNQLGCSNLAHGYASMPKS IKIEMLQDTVPNLGIITAYNDMVSAHQPFKDFPDQIKDEAQKNGATAQVAGGTPAMCDGI TQGYAGMELSLFSRDVIAMSTAVGLSHQMFDGSLFMGVCDKIVPGLMIGALSFGHIPGIF VPAGPMSSGIGNKEKARTRQLFAEGKVGRDALLESEMGSYHSPGTCTFYGTANSNQMMME MMGVHLPAAAFVHPYTDLREALTRYAAGHLARGIKNGTIKPLGEMLTEKSFINALIGLMA TGGSTNHTMHLVAMARAAGVILNWDDFDEISSIIPLLIRVYPNGKADVNHFTAAGGLPFV IRELLDAGLLHDDVDTVVGHGMRHYTKEPFLIDGKLEWREAPETSGNDDILRKADNPFSP DGGLRLMKGNIGRGVIKVSAVREGCRIIEAPAIVFNDQREVLAAFERGELERDFVCVVRY QGPRANGMPELHKLTPPLGILQDRGFKVALLTDGRMSGASGKVPASIHMTPEALMGGNIA KIRTGDLIRFDSVTGELNVLINEAEWNAREVEHIDLSANQQGCGRELFANFRSMTSSAET GAMSFGGEFA >gi|289656352|gb|ADEA01000015.1| GENE 32 29391 - 30029 1219 212 aa, chain + ## HITS:1 COG:NMA1611 KEGG:ns NR:ns ## COG: NMA1611 COG0800 # Protein_GI_number: 15794505 # Func_class: G Carbohydrate transport and metabolism # Function: 2-keto-3-deoxy-6-phosphogluconate aldolase # Organism: Neisseria meningitidis Z2491 # 1 212 1 212 212 365 95.0 1e-101 MFKLTPREILSAGAVVPVMAIDDLSTAVDLSHALVEGGIPTLEITLRTPVGLDAIRLIAK EVPNAIVGAGTVTNPEQLKAVEDAGAVFAISPGLHESLAKASHNSGIPLIPGVATPGEVQ LALEHGIDTLKLFPAEVVGGKAMLKALYGPYADVRFCPTGGISLATAPDYLALPNVLCVG GSWLTPKEAVKNKDWDTITRLAREASALKAKA >gi|289656352|gb|ADEA01000015.1| GENE 33 30245 - 30919 1065 224 aa, chain - ## HITS:1 COG:YPO4056 KEGG:ns NR:ns ## COG: YPO4056 COG2864 # Protein_GI_number: 16124172 # Func_class: C Energy production and conversion # Function: Cytochrome b subunit of formate dehydrogenase # Organism: Yersinia pestis # 2 224 3 224 224 246 56.0 2e-65 MKEKLIQRYTRPERINHWVVAICFVLLAVSGLAFFYPAFFWLTGIFGTPQLARMIHPIIG VVMFLGFARQFLRYWHHNFIDKEDVKWMTSVLKVLKGYEVGDVGKYNGGQKGMFWLMTAC MLVLIATGVIAWRPYFAQYFPIPVIRLALLAHAWAATILIAGIIVHAYAAIWINGTIRAM VEGVVTQAWAKKHHPRWYREMIAKNKAHEENTGNGGIDGEAEKP >gi|289656352|gb|ADEA01000015.1| GENE 34 30919 - 31839 1130 306 aa, chain - ## HITS:1 COG:fdoH KEGG:ns NR:ns ## COG: fdoH COG0437 # Protein_GI_number: 16131733 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Escherichia coli K12 # 1 286 1 287 300 466 77.0 1e-131 MALQSLDIKRRSATSAVTPPPGVRKPIEVAKLIDVSSCIGCKACQVACSEWNDIRDEIGT NHGVYDNPIDLTAKSWTVMRFSETEENGKLEWLIRKDGCMHCADPGCLKACPSPGAIIQY QNGIVDFHQENCIGCGYCIAGCPFNIPRLNKEDNRAYKCTLCSDRVAVGQEPACVKTCPT GAIQFGSKEDMKAVAQERVEDLNRRGYKNAGLYDPQGVGGTHVMYVLHHADKPGLYHGLP ENPSISKTVKLWKGFLKPLATFGIAAATLAGYFHYITVGPNRAVEDGEEPEVIGKDGKTL PREEDA >gi|289656352|gb|ADEA01000015.1| GENE 35 31850 - 34903 3742 1017 aa, chain - ## HITS:1 COG:STM1570 KEGG:ns NR:ns ## COG: STM1570 COG0243 # Protein_GI_number: 16764914 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Salmonella typhimurium LT2 # 1 1017 1 1015 1015 1367 62.0 0 MNVSRRQFFKVTAAGAGATGLAVMGVMPENAWAEVRQYKLSRATETRNNCTYCSVGCGTI LYSMGDGAKNAKKVIFHIEGDPDHPVSRGSLCPKGASLLDFVHSPNRVHYPEVREPFTNE WKRISWHDALTRIAKYIKAERDANLIVQNENGTPVHRLPSLGMLTASASSNETGILTQKW MRSLGIVATDAQARVCHGPTVSALASTFGRGAMTNTFVDIQHADFIMVMGGNAAEAHPVG FKWVIEAKKKKGTKLFVVDPRFNRTASVADFYAPIRSGSDIAFLGALINWLIENDKIQWE YVKAYTNAGFIVSEGFGFDDGMFSGYDEGRKKYDNETWYYELDENGYAKTDPTLQHPRCV FQLLKKHYSRYTLDVMNTICGTSKEDFLKVAEAWGEMAAPDKAGTILYALGWTQHTTGSQ IIRTMAMVQLLLGNIGMSGGGVNALRGHSNIQGLSDLGLLSTSLPGYLNLPNEFNHPTFQ DYIAKNTPKPLQPNQLNYWGNTPAFFVSFLKWMYGENATKENNWGYDWLPKWDKMYDILQ LIELMYQGKVNGLLVQGFNAQGSFPDAGRVTEAFSKLKFMVVMDPLKTETASFWENHGEA HNVDPSKIQTEVFRLPTPCFAEEAGSIVNSSRWLQWHHPGAEPPGEALPDLDILGELHMM LKEMYEKEGGTAPEPITKLAWHYKNPNAPTPEEMAKESNGYALADLTDSDGNIIRKKGEL LDGFSQLRDDGTTECATWIFSGSWTQAGNQMDRRDNTDSGLGNTPKWAWAWPANRRILYN RASCNPEGRPWNPDRVLIKWDGKKWGGADVADFKADAAPDSGMNPFIMNEEGVGRLFAAR KLVDGPFPEHYEPLESPIGTNPLHPKVVQSPAIRLFDSVKGRIGTHEKFPYVGTTYRLTE HFQFWTKSVRLLMIAQPEQFVEISEELAKEKGIEKGDWVKVSSQRAYIKAKAVVTKRVKP LRIHGRTVHQIGIPLHGGWENIAGSKQFIVNGLTPFVGDCNTQTPEYKTFLVNIEKA >gi|289656352|gb|ADEA01000015.1| GENE 36 35213 - 35737 699 174 aa, chain - ## HITS:1 COG:lin2017 KEGG:ns NR:ns ## COG: lin2017 COG0526 # Protein_GI_number: 16801083 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Listeria innocua # 39 146 25 130 157 57 27.0 9e-09 MKKTWTAVAAALAVAACSSAGNETEMLKNRLSEAQTAVKLSAENTKRLEDTYSDIYFELN SLTVANFKTKVAAGDTFYAYIGRPSCGDCNAFEPMFKRYIEKHRLGSKIYFVNVHRLHQD KEAWMAFRQQYKLSGTPVLAKYSKGRQVNKLDLEDNGGSISAADLEKWLALNKL >gi|289656352|gb|ADEA01000015.1| GENE 37 35966 - 37387 1839 473 aa, chain + ## HITS:1 COG:no KEGG:APJL_1741 NR:ns ## KEGG: APJL_1741 # Name: not_defined # Def: hypothetical protein # Organism: A.pleuropneumoniae_JL03 # Pathway: not_defined # 1 473 1 468 468 389 43.0 1e-106 MNKLPLLLLPLSLAAFADVPPVRVPAPVFFDEHPGDKIPSSEELAGQDEPAPAAVSDGLS PGSALEERINRAVIRQDWDALTDLLAQYRTRPDRDQILYDYALGALRRSQLRHDEAVALY RGIVLRQPDLAYPRFDLGVMLFENKQYREAAAELERAKPDLQPDMQQLADHYLKAVKDAQ SWQPEASLQYEATDNVNSASATEIIEWGGRQWHKTADSLPQSAHGFRYGLGLSREINLGG HHFAYGNLSGDGVHYWDNREFNEQSVNLAAGYKNRSITRSFGIVPFAEQNWLGGNRYNRS FGAHTDFSRRLNARWRVMLNAGYVRKHYQDHRMAARYDSGMPLAGATLLYTAPKNWLFYG GADWSHDITKEAEQASVRKGVRLGMVKFFSDGLGLRANLRYTRRTFDAPGELVYRFIRKD REYQANASIWHDKIAWKGLVPHLNMRYLRTDSNMSGFYSRRNMQWFVSVEKQF >gi|289656352|gb|ADEA01000015.1| GENE 38 37462 - 38457 1287 331 aa, chain - ## HITS:1 COG:NMB1573 KEGG:ns NR:ns ## COG: NMB1573 COG0078 # Protein_GI_number: 15677423 # Func_class: E Amino acid transport and metabolism # Function: Ornithine carbamoyltransferase # Organism: Neisseria meningitidis MC58 # 1 331 1 331 331 610 93.0 1e-174 MNLKNRHFLKLLDFTPEEITAYLDLAAELKTAKKAGREVQRMKGKNIALIFEKTSTRTRC AFEVAARDQGAGVTYLEPSASQIGHKESIKDTARVLGRMYDGIEYRGFGQDVVEELAKYA GVPVFNGLTNEFHPTQMLADALTMREHSGKPLNQTAFAYVGDARYNMANSLLVLGAKLGM DVRIGAPKTLWPAENIVARARAVAEETGGKILLTENAEEAVKSVDFIHTDVWVSMGEPKE AWQERIDLLKDYRVTPELMAASGNPQVKFMHCLPAFHNRETKVGEWIYETFGLNGVEVTE EVFESPASIVFDQAENRLHTIKAVMVAALGD >gi|289656352|gb|ADEA01000015.1| GENE 39 38575 - 39327 864 250 aa, chain - ## HITS:1 COG:NMB1528 KEGG:ns NR:ns ## COG: NMB1528 COG0350 # Protein_GI_number: 15677380 # Func_class: L Replication, recombination and repair # Function: Methylated DNA-protein cysteine methyltransferase # Organism: Neisseria meningitidis MC58 # 1 250 20 269 269 462 90.0 1e-130 MITLPSLNNLPSKWDEIRHWLETQVFECEVMPYPNLTEHDAKQFEQDFIDRIGCAPEEYV LIRRAIRMLEASYPDSPNELTTAAIATPLGEMLAVFGGKGLCLLEFVGQKHMEQEITAVQ KALRGRLVFREDERTQLLRQELDLYFKGRLKTFATPLEQIGTEFQKQAWDALLAIPYGET RSYKEQAQRLGNPKAVRAVAAANGQNKVSILIPCHRVIGSDGKLTGYAGGLNRKQSLLAL ERGEVQTTLF >gi|289656352|gb|ADEA01000015.1| GENE 40 39639 - 40196 643 185 aa, chain + ## HITS:1 COG:NMA1729 KEGG:ns NR:ns ## COG: NMA1729 COG1881 # Protein_GI_number: 15794622 # Func_class: R General function prediction only # Function: Phospholipid-binding protein # Organism: Neisseria meningitidis Z2491 # 1 100 13 112 186 194 97.0 7e-50 MQTRILSAVLLAFSTAAFAEGAFTLQFDNPSKDGGFTQNQLLSAPYGFGCSGGNASPALS WKNPPAGTKSFVLTVYDKDAPTGLGWMHWVVADIPADVRRLPAGITAQGGRLPKGALQTR TDFGTPGYGGACPPEGRKHRYEFTLTALKVAKLPNITAESTPALVGFFTKANSLGEAKFT VEHRR >gi|289656352|gb|ADEA01000015.1| GENE 41 40174 - 41022 666 282 aa, chain - ## HITS:1 COG:YPO1837 KEGG:ns NR:ns ## COG: YPO1837 COG2207 # Protein_GI_number: 16122088 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Yersinia pestis # 12 262 11 265 291 155 32.0 7e-38 MPSNYFHTRERLGALGGIVQHHTALYRSVAVHEPTVVIVRRGCKKLRWAGRELRIAAGEA VALAGGQTFDVINIPDSDDLYQAQWIAFEQEAIERFAAQYGTAQAVCDAVKLPHPGRMSA AFDYAAAVLADEEVPHNAAEAALCGVLAWLQHDSIGFAVYEGVNLMRQIRKLITADMAAD WSSAMLAQRLNCSEAALRRRLARQDTNFRTLLTDVRMMRALTLLQVTQWPVAQIAGAVGY DCPSRFSARFKERFGCVPSAVRSEAEPAAYRCMGQVSVGVRP >gi|289656352|gb|ADEA01000015.1| GENE 42 41414 - 42559 1331 381 aa, chain - ## HITS:1 COG:NMA1730 KEGG:ns NR:ns ## COG: NMA1730 COG0624 # Protein_GI_number: 15794623 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Neisseria meningitidis Z2491 # 1 381 1 381 381 758 96.0 0 MTETQSLELAKALISRSSVTPDDRDCQKLLAERLHKIGFAAEELHFGDTKNIWLRRGTQA PVVCFAGHTDVVPTGPVEKWDSPPFEPTERDGRLYGRGAADMKTSIACFVTACERFVVEH PDHQGSIALLITSDEEGDALDGTTKVVDVLKARDELIDYCIVGEPTAVDKLGDMIKNGRR GSLSGNLTVKGKQGHIAYPHLAINPVHTFAPALLELTQEVWDEGNEYFPPTSFQISNING GTGATNVIPGELNVKFNFRFSTESTEAGLKQRVHAILDKHGVQYDLQWSCSGQPFLTHAG KLTDVARAAISETCGVETELSTTGGTSDGRFIKAIAKELIELGPSNATIHQINENVRLDD IPKLSAVYEGILARLLAEKAV >gi|289656352|gb|ADEA01000015.1| GENE 43 42645 - 43265 793 206 aa, chain - ## HITS:1 COG:no KEGG:NGK_0797 NR:ns ## KEGG: NGK_0797 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 1 206 1 206 206 385 99.0 1e-106 MLTPKSCDLFNIPFFQFAQLKKYQPESIPQIKADYKENWQIWQQLIQQVAADLGEPFAPP HIERWCNGWQVRAHFFAYFKYAQYKNSAAILSILLNRRRLSVSLDWHCYKADVSPIALPE YNRWLDNFDTEKYAAFDMWHGAESEYDDYRTVAQQSESDRRLQNDEDFFCIGKHIERDDL GKQDVAKWIAETVEDLLPLYEACHGK >gi|289656352|gb|ADEA01000015.1| GENE 44 43398 - 43907 757 169 aa, chain - ## HITS:1 COG:no KEGG:NMA1732 NR:ns ## KEGG: NMA1732 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_A # Pathway: not_defined # 1 169 1 169 169 328 96.0 5e-89 MNPFETKSVTFAEPIEMLYACHGKVRRFCGQVAMLSDYIAENGCNQIVLQTIRQIAQYFN VAAPLHHEDEEENFFPLLLQYAPQAQESVDELLRQHVSLHGNWDAVAAEFAKLEADNAYI PDAEAFKRFVAGYDVHLAIEEPLFDMGKTFIPKEKLTEIGEIMAARRRK >gi|289656352|gb|ADEA01000015.1| GENE 45 44018 - 44602 673 194 aa, chain - ## HITS:1 COG:NMA1733 KEGG:ns NR:ns ## COG: NMA1733 COG3241 # Protein_GI_number: 15794626 # Func_class: C Energy production and conversion # Function: Azurin # Organism: Neisseria meningitidis Z2491 # 1 194 1 183 183 215 71.0 5e-56 MKAYLALISAAVIGLSACSQEASKPAEASAPTASAASEAAPAPAESTPPADAPASEAAST AAAPAAGNCATTVESNDNMQFNTKDIQVSKACKEFTITLKHTGTQPKSGMGHNIVISKAE DMDGVLKDGATAGADADYVKAGDARIVGHTKLIGGGEEASVTVDPAKLADGSYKFYCSFP GHGALMNGTVTLVD >gi|289656352|gb|ADEA01000015.1| GENE 46 44955 - 45380 351 141 aa, chain - ## HITS:1 COG:no KEGG:NMCC_1443 NR:ns ## KEGG: NMCC_1443 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_053442 # Pathway: not_defined # 1 138 1 138 140 149 59.0 2e-35 MNLEQLGKRDRQLESLLRQSQQWRKLDGEVKRIMPANLRPHFQTACVEGGRLVLLAANSM AASRLKMILPALLPQLRKFKEDIEAVAVKTVPKIPEREKVNSLHLSETALESLGKTADRV RERHPELADVLERLAEKHKVK >gi|289656352|gb|ADEA01000015.1| GENE 47 45554 - 48307 4100 917 aa, chain + ## HITS:1 COG:NMB1536 KEGG:ns NR:ns ## COG: NMB1536 COG0653 # Protein_GI_number: 15677388 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecA (ATPase, RNA helicase) # Organism: Neisseria meningitidis MC58 # 1 916 1 915 916 1597 89.0 0 MLTNIAKKIFGSRNDRLLKQYRKSVAKINALESEMQALSDESLQAKTAEFKQRLADGQTL DDILVEAFAVCREASRRVLGMRHFDVQLIGGMVLHNGKIAEMRTGEGKTLVATLAVYLNA LSGKGVHVVTVNDYLASRDAGIMAPLYNFLGLTVGVIIADMQPFDRQNAYGADITYGTNN EFGFDYLRDNMVTDQYDKVQRELNFAVVDEVDSILIDEARTPLIISGQADDNVQLYQIMD AIPAQLVRQETEEGEGDYWVDEKAHQVILSEAGHEHAEQILTQMGLLQENDSLYSAANIA LMHHLMAALRAHSLFHKDQHYVIQDGEIVIVDEFTGRLMSGRRWSEGLHQAVEAKEGVEI KRENQTLASITFQNYFRLYTKLSGMTGTADTEAFEFQSIYNLETVIIPTNRPVQRKDFND QIFRSAEEKFEAVVKDIQECYKRGQPVLVGTTSIENSELVSKLLYQAGLPHNVLNAKEHE REALIVAQAGKVGAITVATNMAGRGTDIVLGGSLKHQIDAIRADETLSDEEKQAQISALE NGWQAEHDRVVAAGGLHIVGTERHESRRIDNQLRGRAGRQGDPGSSRFYLSFEDPLLRLF ALDRAAAILNRLAPERGVAIEHGLLTRQIEGAQRKVEGRNFDMRKQVLEYDDVANDQRKV IYHQRNEILNNQDVSDLTKGIREEVISDLVDLHIPPDSMEEQWDIPALEHQLEAEFRLSA DIRSWLEADNTLDGQDIKERLIERIETEYAEKTELVGKKPMADFERNVMLQVIDTQWREH LAAMDYLRQGIHLRSYAQKNPKQEYKREAFAMFENLWRGIKQNIASLLASVQIERNTVPE EMEERPPTDIHATHSGAPDMEELLGESQTDLVTEAFDPTGNDFSLDTLAEEGRIVHRNEL CPCGSGLKYKQCHGKLN >gi|289656352|gb|ADEA01000015.1| GENE 48 48416 - 49528 1744 370 aa, chain + ## HITS:1 COG:NMA1939 KEGG:ns NR:ns ## COG: NMA1939 COG0082 # Protein_GI_number: 15794822 # Func_class: E Amino acid transport and metabolism # Function: Chorismate synthase # Organism: Neisseria meningitidis Z2491 # 1 366 1 366 366 678 95.0 0 MAGNTFGQLFTVTTFGESHGAGLGCIIDGCPPGLALTESDIQADLDRRKPGTSRHVTQRR EADQVEILSGVFEGKTTGTPIALLIRNTDQRSKDYGNIATGFRPGHADYTYWHKYGTRDY RGGGRSSARETAARVAAGAVAKKWLKEKFGTEITAYVTQVGEKEIQFEGCEHISQNPFFA ANQSQIAELENYMDSVRKSLDSVGAKLHIEAANVPVGLGEPVFDRLDAEIAYAMMGINAV KGVEIGAGFGSVVQRGSEHGDELTPQGFLSNHAGGILGGISTGQDIHVNIAIKPTSSIAT PRRSIDINGNPVELATHGRHDPCVGLRAAPIAEAMLALVLIDHALRHRAQNADVAVDTPD IARAGKARRP >gi|289656352|gb|ADEA01000015.1| GENE 49 49619 - 50068 744 149 aa, chain + ## HITS:1 COG:no KEGG:NMB1681 NR:ns ## KEGG: NMB1681 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis # Pathway: not_defined # 1 112 1 112 141 193 90.0 1e-48 MTQETALGAALKSAVQTMSKKKQTDMIADHIYSKYDVFKRFKPLAVGIDQDLVAALPQFD PSLIARVLANHCRRPRYLKSLARGGKRFDLNNRFKGEVSPEEQAIAQQHPAVQQDLAAQA ARKATAQEEQPETASAADVSPAESETPAV >gi|289656352|gb|ADEA01000015.1| GENE 50 50296 - 51210 1369 304 aa, chain + ## HITS:1 COG:RSc2422 KEGG:ns NR:ns ## COG: RSc2422 COG0175 # Protein_GI_number: 17547141 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes # Organism: Ralstonia solanacearum # 3 304 15 316 316 491 79.0 1e-139 MSIQNRHLDWLEAESIYIIREVVAEAKNPALLFSGGKDSVVLLALAVKAFKLEGRPLKLP FKLLHVDTGHNYPEVIQFRDETVARTGVQLVVGSVEDSIKKGTVVLRRETDSRNAAQAVT LVETIEEQGFDALMGGARRDEEKARAKERIFSFRDEFGQWDPKSQRPELWSLYNTRLFSG ENMRVFPISNWTELDIWQYIARENLALPPIYYSHKREVVERGGLLVPVTPLTPKREGEVS QIRDVRFRTVGDISCTCPVASTAATPEDIIAETAAATISERSATRMDDRVSEAAMEERKK AGYF >gi|289656352|gb|ADEA01000015.1| GENE 51 51351 - 51929 851 192 aa, chain + ## HITS:1 COG:BS_ydeN KEGG:ns NR:ns ## COG: BS_ydeN COG3545 # Protein_GI_number: 16077593 # Func_class: R General function prediction only # Function: Predicted esterase of the alpha/beta hydrolase fold # Organism: Bacillus subtilis # 1 181 1 181 190 131 35.0 1e-30 MTRRVFIVHGFEGNPHGNWFDWLAAQARACGVQAGALVMPNPGNPTVQSWQFTLDQHIGK PDENVFLVGHSLGCITLLHFLCRQQPERIGGLVLAAGFADPLPPLPQLDPYIKGAAPDFS VLGRIRMPKQCLVSDNDSHVPPALTLSMAERLDSPVIHIPNGGHLMDSDGFTELPQVWEA LKPMLDADKAGQ >gi|289656352|gb|ADEA01000015.1| GENE 52 52017 - 54464 2935 815 aa, chain - ## HITS:1 COG:NMA1444 KEGG:ns NR:ns ## COG: NMA1444 COG2217 # Protein_GI_number: 15794349 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Neisseria meningitidis Z2491 # 1 815 1 811 823 1140 70.0 0 MKNNCFHCGLEVPENVRFPIRFENEEHETCCAGCQAVAQSIIDAGLGSYYKQRTAEAEKA VLPPPDMLAQLKLYDLPEVQADFVAAGQGGEREAVLMLGGITCAACVWLIEQQLLRLDGV VRVDLNYSTHRARVVWDNDRTALSDILLRIQSTGYTAAPYDVQKVEVQAQKERKQSIVRL AVAGLAMMQTMMFAVPTYFYGGDIEPLYLSILHWGGFLMALPAVFYSAQPFYRGAWRDLK NRRVGMDTPIALAIVMTFAAGIYSLATNAGQGMYFESIAMLVFFLLGGRFMEQIARRKAG SAAERLVKLVPAFCHKMTGFPADEEVEEAVVAQLQSGDVVLVKPGEVVPADGTVLSGESE VNEAMLTGESLPVAKVRDAKVVAGTLNTTGPLVVRIDSTGSGTRLAHIVRLLDRALAQKP RLAEMADRYASAFVFGELLLAVPVFAGWAWYADAQTALWITVALLVITCPCALSLATPTA LAASTGTLAAEGVLVGGRQSLETLAQIDDIVFDKTGTLTKGELSVSRIIGLGRLKNDEAL AVAQALERQSEHPVARAILRCPLSDGLPHIRVGQRVNRVGHGVSAQIDVGGKTLVWALGR AGFVAETAGALPPDAAHIAHDGSMVFLGNSEGFQTAFLLEDGIKDGAAGMAAELKKRGIR LHLLSGDRTAAVARVAAQLGLDEYRAEAAPEDKLAYVEGLQRQGRKVLMVGDGINDAPVL ARADVSAAVAGGADVARDGADVVLLGDDMGVLPLMIDQAVRTRAVIRQNLSWASAYNIIA VPLAVLGYVKPWIAALGMSASSLLVLGNALRLLKK >gi|289656352|gb|ADEA01000015.1| GENE 53 54877 - 55002 126 41 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIDRLMPLFAVIGVLSSIVYLTLAVWMVYENLPHVKKKHSA >gi|289656352|gb|ADEA01000015.1| GENE 54 55099 - 56265 681 388 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 [Roseobacter sp. AzwK-3b] # 46 357 28 343 425 266 47 4e-70 MFQVDKSLEKPERVMLVGVMLDTDYAAGGAGGQVFYSAESRKAHFQTALDEAADLVRAAG GELVAVETSKRDRPHSALFVGTGKAEELAASVRLHDVGLVVFNHELTPTQERNLEKELQC RVLDRVGLILAIFAKRAQSQEGKLQVELAQLSHLSGRLVRGYGHLQSQKGGIGLKGPGET QLETDRRLINQKITALKRQLKNVRQQRATRRQSRMGGRLKTFAIVGYTNAGKSSLFNRLT KAGVLAENQLFATLDTTARRLFLSHEVSVILTDTVGFVRDLPHKLVSAFSATLEETALAD VLLHVVDVSNPEFGRQMEDVNAVLEEIGAHEIPQLAVYNKIDLQPSEERKTGIVRDAAGK AAAVNISVAENLGLDDLRQAMIERALEG >gi|289656352|gb|ADEA01000015.1| GENE 55 56498 - 57268 915 256 aa, chain - ## HITS:1 COG:NMA1160 KEGG:ns NR:ns ## COG: NMA1160 COG0688 # Protein_GI_number: 15794106 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine decarboxylase # Organism: Neisseria meningitidis Z2491 # 1 255 1 264 265 406 78.0 1e-113 MNRLYPHPIIAREGWPFIGGGLILSVLFSMCCGWWSLPFWVFTVFALQFFRDPARNIPQD AEAVLSPVDGRIVVVERARDPYRNVEALKISVFMNVFNVHSQKAPADCTVTAVEYTRGKF MNADLDKASTENERNAVLATTQSGREITFVQVAGLVARRILCYTKAGERLSRGERYGFIR FGSRVDVYLPVDAQAMVSIGDKVTGVSTVLARLPLHAPVAAPEESAKAEAAAAVSQDEIE ASAEKVREAADKEIKG >gi|289656352|gb|ADEA01000015.1| GENE 56 57475 - 57999 441 174 aa, chain - ## HITS:1 COG:MTH501 KEGG:ns NR:ns ## COG: MTH501 COG1401 # Protein_GI_number: 15678529 # Func_class: V Defense mechanisms # Function: GTPase subunit of restriction endonuclease # Organism: Methanothermobacter thermautotrophicus # 4 170 11 179 546 97 35.0 1e-20 MPTVITDPARLASAQALFTETIRTALPQRVICTVSGAGGGFETEAAYSPELNLWYAVQRQ DKKCWNGFGIGEPLGGKKVSIAAEINFPAEGLNRAVSGVFAEDGKGGLWVLHRGKIRGGK ELFFRYFGGETVAADDGGREDTFALIGRLDDADFAAKLAAFVSEVLRIKAAAKG >gi|289656352|gb|ADEA01000015.1| GENE 57 58083 - 58388 217 101 aa, chain - ## HITS:1 COG:no KEGG:NGK_0684 NR:ns ## KEGG: NGK_0684 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 1 101 1 100 100 137 70.0 1e-31 MKNVLKALATTVFAVSALSASARGMHKHKPLAFEELPKICQQYFTRAEVCYKKAGDKAEF QRGNTKFLWQSLPAADLGQRERMCQIAMDSFAEKTRNLHCE >gi|289656352|gb|ADEA01000015.1| GENE 58 58535 - 59608 1338 357 aa, chain - ## HITS:1 COG:NMA0732 KEGG:ns NR:ns ## COG: NMA0732 COG3213 # Protein_GI_number: 15793708 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in response to NO # Organism: Neisseria meningitidis Z2491 # 1 357 1 357 357 554 94.0 1e-157 MRPFFVGAAALAILGALVFFISPAAIVLHRQIFLELMLPAAYGGFLTAAMLEWTGYKGRL KPVATLMTALLLVASVLLPFAPQTASFFVAAYWLVLLLFCVWLIWLDRNTDNFALLMLLA AFTVFQTAYAVSGDLNLLRAQVHLNMAAVMFVSVRVSVLLGAEALKGCRLKDPVFIPNVV YKNIAITFLLLHAAAELWLPAQTAGFTALAVGFILLAKLRELHHHELLRKHYVRTYYLLQ LFAAAGYLWTGAAKLQNLPASAPLHLITLGGMMGGMMMVWLTAGLWHSGFTKLDYPKLCR IAVPILFAAAVSRAVLMNVNPIFFITVPAILTAAVFVLYLLTFVPIFRANAFTDDPE >gi|289656352|gb|ADEA01000015.1| GENE 59 59928 - 60554 460 208 aa, chain - ## HITS:1 COG:SAP005 KEGG:ns NR:ns ## COG: SAP005 COG4300 # Protein_GI_number: 16119205 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted permease, cadmium resistance protein # Organism: Staphylococcus aureus N315 # 5 208 1 204 205 278 85.0 5e-75 MRCFMFSTVITAAVLYIATAVDLLVILLIFFARANTRKEYRDIYIGQYLGSVILILVSLF LAFVLNYVPEKWVLGLLGLIPIYLGIKVAIYDDCEGEKRAKKELDEKGLSKLVGIVALVT VASCGADNIGLFVPYFVTLDLVDLLVTLLVFLILIFVLVYTAQRLANISGVGEIVEKFSR WIMAVIYIGLGLFIIIENNTIRTIISII >gi|289656352|gb|ADEA01000015.1| GENE 60 60961 - 61653 177 230 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 191 1 213 245 72 27 1e-11 MLCLENVRFEILRDPIVRDFSLNLQHGEVKALFGPSGCGKTTVLRLIAGLETPKSGTIRN TFRKTGFLFQENRLPENLTAMQNIAIFMDKPDEGEIIALAAKVGLTSGDLNKYPTELSGG MAKRVAFLRLLLCGCDLALLDEPFVGLDRDLRDILVAMLVEKIERQGMACMLVTHDRFEA ARLSHEIMLLSTKGMNVQNVITLPTPLSERNSAFEEGVVAREFQGIHYYE >gi|289656352|gb|ADEA01000015.1| GENE 61 61653 - 62450 976 265 aa, chain - ## HITS:1 COG:AGl927 KEGG:ns NR:ns ## COG: AGl927 COG0600 # Protein_GI_number: 15890580 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 20 264 14 259 269 134 34.0 2e-31 MIKTDKIRKPQPAVFYIIDYLWSGFAGLSVAMVVVVLWAWGSAVFGEFMLPAPVEVFQKS LDLLKHFQENEIGISLWRSVVGISVALAAGLAAGLVAGSFKTAMALLKPVITVLLAMPPI IWVVMALFWFGFGNPSVLFTIIVLVAPLTFASAAVGMASVNKQHEELFDAYKLGRLKKIR YLYIPHLTGYVISSIGVAVAMGVKVVIMAELLGASEGVGARIADARAMLETSTVMAYVVL VIVFVSLFEYLITKPLEILFMPWRR >gi|289656352|gb|ADEA01000015.1| GENE 62 62639 - 63358 334 239 aa, chain - ## HITS:1 COG:no KEGG:ECSE_0286 NR:ns ## KEGG: ECSE_0286 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 4 239 5 242 242 250 54.0 3e-65 MEKNFLFIDHEKLDTTIYRIFPIHRFLEILDTNKLTLVKPKLWDDPFENALLSSTFVMSG EETSIEARNSVYGQCWTWHRESDAMWRIYSPNKDGIRVSTTPKKLLTALHEEIGSFAKVR GFLGQVQYATSKDLINKFQKIELLKTDGSGIAESLLYKRKAFQHENEVRLIYFGQDGLCK EDIFKFNIKPTELFDDLLFDPRINPYLKEEYKGQIIKTGEFKFKRSKLYDPPENFKFNL >gi|289656352|gb|ADEA01000015.1| GENE 63 63788 - 64765 1335 325 aa, chain - ## HITS:1 COG:AGl928 KEGG:ns NR:ns ## COG: AGl928 COG0715 # Protein_GI_number: 15890581 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 5 324 6 326 327 158 34.0 1e-38 MELKRRDFLKMTAALAAAGVSPSLLAAGKEQFTIYGAPAMPSVTIAVAALQGKLAKQADV SLKVWRSPDQLRAGVASGQFKVMMSPSNVGVNLRNQGQKVGMVNILTNGITQLVCKGSAI ASPQDLVGKKILVPFKNDMPDIVLQALLKKLKIDAHKVGITYTATPPEAVGLFLSKDYHA AILPEPMASASMLKGKTMGVNVVRGFDLVKAWGQAFDTKPLIPMAGIIANEEYFHAHKAQ FDIFHQDLKNALNWILANRQSAAKIGKNYLPAPEPALVMGLDGARLTVTKGSEVKNEILK FYEILMQFNPKLLGGKLPDNVFFLA >gi|289656352|gb|ADEA01000015.1| GENE 64 65074 - 66462 2289 462 aa, chain + ## HITS:1 COG:NMA1670 KEGG:ns NR:ns ## COG: NMA1670 COG0114 # Protein_GI_number: 15794564 # Func_class: C Energy production and conversion # Function: Fumarase # Organism: Neisseria meningitidis Z2491 # 1 462 1 462 462 861 98.0 0 MSTRTEHDTMGNVEVPSEAYWGAQTQRSRNNFKIGGETLPQPLIYALALVKKAAAATNVS LGRIKPEQADLITQAADDVLNGKLDGQFPLVVWQTGSGTQSNMNMNEVLANRANEIAGTG LAAYQPVHPNDHVNHAQSTNDAFPTAIHVAAAIEINRHLIPSVQALRDTLDKKAQAFAPI VKIGRTHLQDATPLTLGQEFSGYVSQLDHGLGRLNDALKGLYELALGGTAVGTGLNSHPE YAEKAAAKLAELSGLPFVSAPNKFEALGGRDAAVAASGALKTLAASLNKIANDIRWLASG PRCGLGEIKIPENEPGSSIMPGKVNPTQCEAMTMVCCQVFGNDVTISMAGASGNFELNVY MPVIAYNLLQSIRLLGDACNSFNENCAAGIEPVPEKIDYFLHHSLMLVTALNRKIGYENA AKVAKTAYKNDKSLRETAVELGLLTGEEFDELVVPADMVHPR >gi|289656352|gb|ADEA01000015.1| GENE 65 66601 - 67311 1128 236 aa, chain - ## HITS:1 COG:NMB0848 KEGG:ns NR:ns ## COG: NMB0848 COG3471 # Protein_GI_number: 15676744 # Func_class: S Function unknown # Function: Predicted periplasmic/secreted protein # Organism: Neisseria meningitidis MC58 # 1 235 1 233 234 233 57.0 2e-61 MLRNVLIASLIAAATLPAAAEPLNYNVVEFSESAGMKVPRDTMTAMFRIRAEGKERQAVN AAFMEKFNDFSRKAKKSAFKTELTGRNAMPRYQYNNGKRTQTGWEESAELKVESKDFAAL NRLIAETQTSAEVAQTYFSVSKQKREEIIDQVSKAALLRFKERAQALTRTLGFSNYKIVK LNLGHVGSQVSERSTEAVMMRSKAVAMSMAASSEEMDNVSPGSEEISITVDGSIQM >gi|289656352|gb|ADEA01000015.1| GENE 66 67378 - 68787 2027 469 aa, chain - ## HITS:1 COG:NMA1813 KEGG:ns NR:ns ## COG: NMA1813 COG0569 # Protein_GI_number: 15794703 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transport systems, NAD-binding component # Organism: Neisseria meningitidis Z2491 # 1 469 1 470 470 709 76.0 0 MKILIIGSGQVGSTVAQNLASSSANDVTIVDLDEKALHRIGSRLDVQTIVGNGASPFVLE QAGAADSDLLLALTRSDETNIVACKIAADLFNIPSRIARVRSAEYLEYLHPSADGGEEAD SLSIFDITETISPEQLVTEQLVGLLSYTSALQVLRFSDDRARMVVVQARQGGLLVNKEIA QINEHLPEGADCQICAVYRNNRLIVPSSKTVIIEGDEVFFVASTDSINAIMRELRPNEQH TRRIMIAGGGKIGHRLAKQLENEYDIKIIEYSSSRAEWLAENLDNTLVLQGTATDETLLD EEYIDEIDVFCALTNDDENNIMSSLLAKNRGAKRVITIVNRSSYVDLLEGNKIDIVVSPH LITIGSILAHIRRGDISAVYPLRRGTAEAIEVVVHGDKKTSSIVGRKISDVKWPQGCHFA ALVRGDEVIMAHRGGTVLQDGDHIIFFVSRRRVLRELEKLIQVKMGFFG >gi|289656352|gb|ADEA01000015.1| GENE 67 69106 - 69288 398 60 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIHLSKIKSALGLGITAAALLALTGCVVPPSPGPGPEGHGGHHHHMHGPDDGRGPERGPM >gi|289656352|gb|ADEA01000015.1| GENE 68 69388 - 70839 2333 483 aa, chain - ## HITS:1 COG:NMB0470 KEGG:ns NR:ns ## COG: NMB0470 COG0471 # Protein_GI_number: 15676381 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Neisseria meningitidis MC58 # 1 483 4 488 488 519 65.0 1e-147 MGFKPIPAAVALALTLIIWFVIPVPQGVSPDAWHLLALFVGIIAGIIGKAMPIGAMAILG ITLVALTGVTNEKAADATKDALSSLNNSLIWMIGIAIIISRGLLKTGLGMRIGYLLISLF GKRTLGVGYSLALADLVIGPVTPSNTARGGAIVHPIMRSIALSFDSDPEKGTEGKIGKYL ALVNYHANIITCCIFITATAPNPLVVELVAKATNSEIHLSWGTWFAAMAVPGLIAMFLMP LVLYFLYPPEIKQTPNATALAKEKLKEMGAMKRDEKIMLGIFVILLLLWAGVPEMLFGVK VDATATTFLGLSLCLLTGVLTWDDALKEKGAWDTIVWFAALVMMANFLNKLGLIAWLSES LQGGISHLGLGWEAGCALLVLAYLYAHYVFASGTAHVTAMFGAFYGAGLALDAPPMLFAL IMASATGIMMSLTHYASGSSPVIYGSNYVSMTEWWKAGFIMSVVEILIFGTIGIIWWKVL GYW >gi|289656352|gb|ADEA01000015.1| GENE 69 71068 - 71304 181 78 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MALKINLYQIFCNLSPLPAGEGIMVLKSTIIGFSAICPLSRGRGLGRGQNLRMHRIVFLM TNRPVSNLCCEIQQILKP >gi|289656352|gb|ADEA01000015.1| GENE 70 71382 - 72635 1799 417 aa, chain - ## HITS:1 COG:STM2324 KEGG:ns NR:ns ## COG: STM2324 COG1894 # Protein_GI_number: 16765651 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit # Organism: Salmonella typhimurium LT2 # 19 410 26 419 445 289 42.0 7e-78 MNQANQNLLHPSRQVGADLAAWRKVGGGEGLLAALADPQSIVSKLQDANLCGMGGAGFPT WRKWEAAVAAQSKHGDKYVVCNANEDEPGTFKDRVLLAKTPHQVIEGVLIAAVACRANKA IMYVNPHQTESIAAIVPAIEQWKKSDLFIRIENYLGKPLDLKLVETSGRYIGGEETAVIS WLEGGFPFPRRKPPFPAESGVEGEPTLINNTETFANIPQILAKGAEWYKSLGLGDAAGTK LYSLSGDVLNPGLYELPMGTTLQSLIFDHGGGMLEGRTFKAVFTGGPSNTLLTVKDLDVP LDFVSVRERKSSLGTGAMIVISEGTSVVRKVSEYVEFFASNSCGQCPPCKGGTFQLSRLL NRVDTGIGTSDDLRALQSLCQLLPRSGRCGLIDGAVTVLQSSLRTFPEEYGLPAEQD >gi|289656352|gb|ADEA01000015.1| GENE 71 72632 - 74260 2521 542 aa, chain - ## HITS:1 COG:MK0828 KEGG:ns NR:ns ## COG: MK0828 COG1053 # Protein_GI_number: 20094264 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Methanopyrus kandleri AV19 # 83 491 2 409 556 249 42.0 9e-66 MANEIQGIDYETALANLRASSLELRGDLPEKNELLSQFHPDYQANARVKLPIGPNTGDYC HPDLAKLLISHPLIDDYDLSGAEHLNTDVLVIGGGGAGAAAALSATEAGARVIMANKLRI GDSNTVMAEGGIQAAVGAEDSLQQHFDDTIKGGHNAGKKELVAQMVTDAPSAIRWLIGLG MTFDLAKGADSNGMLSRKRAGGTTVPRILSYRDFTGLEMMRVLREAVELDENITQLNRHP AIELLSDEHGRCVGAILYDLEKRSLVLVHAKAVVLATGGSGRLHLQGFATSNHYGATADG LVMAYRIGAKLRDIDSFQYHPTGVAHPPHLAGALISEAVRSAGTKLVNGLGERFVDELQP RDVVAAAILRECREGRGVVRDGQVGVFLDTPRLIENDPDVLNRLVTLGHVAHKCGIDPAV EPVMIHPTLHYQNGGVEINGDGATCVEGLYCAGEVTGGIHGRNRLMGNALLDIISFGRRA GKAAAGCGLPLKKVRGGVGHVHDLQREMTRAGLTSDIKAPVLYPDYGKFDLREHAGLQEQ QS >gi|289656352|gb|ADEA01000015.1| GENE 72 74260 - 74898 980 212 aa, chain - ## HITS:1 COG:no KEGG:AZC_0123 NR:ns ## KEGG: AZC_0123 # Name: not_defined # Def: 4Fe-4S ferredoxin # Organism: A.caulinodans # Pathway: not_defined # 8 211 60 263 272 271 66.0 1e-71 MSENLLTLTIDGHEVKASADSSIIQAYARSGSAITANVGCMGQGVCGSCRCMIRKEGERE VTTALACETKVEEGMQVSFLDYFIPEHIQYYDVSEVGDGWNWLDDTAKAFPEAQHCRHCG GCNRACPKGLEVENGVAQVVSGDFGAAALTFDQCVMCNLCTLSCPEHIRPNHLGLFARRM KAARTLRPVDLMRRLREIDSGKMKVEFEEEAM >gi|289656352|gb|ADEA01000015.1| GENE 73 75584 - 76360 658 258 aa, chain - ## HITS:1 COG:NMA0562 KEGG:ns NR:ns ## COG: NMA0562 COG0501 # Protein_GI_number: 15793554 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Zn-dependent protease with chaperone function # Organism: Neisseria meningitidis Z2491 # 8 255 22 280 293 247 48.0 2e-65 MQLFPNMRLALLVTVVTVAAGCTSVADMVGYDTETLNESAAKSYLQVLRQAQSKQVLDTS SRTSRRITAVFNRLKPYAERENRTGVPFRWQMNVIRSNDLNAWAMPGGKMVMYTGMVDRL HLSDDEIAAVIGHEMTHALLEHSKKAIGGQVLTGLGGSILASATGVDGGLVGLGSDLIAT KPFSRYQESEADAGGVRLMAQAGYNPQAAVTVWDKMSKVQGGMAVALLSSHPTNEARRQA IIRMLPEVMPIYQRSRSR >gi|289656352|gb|ADEA01000015.1| GENE 74 76532 - 77467 1158 311 aa, chain - ## HITS:1 COG:NMA0962 KEGG:ns NR:ns ## COG: NMA0962 COG1686 # Protein_GI_number: 15793919 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Neisseria meningitidis Z2491 # 28 311 29 312 312 404 76.0 1e-113 MMKLCKKMTAVCLGVSLSLAAMPAVADDMDVLGQFLEQNFPTQQDPLEVLAISKAEQVEA QAMMAGPLLSSQSALIMNNKTGEVLYQKNANRVMPIASISKLMSAIVLLDADLNMNELVT ITPEEIDRLKGTGSRLSIGTSLPRKELLHLSLMSSENRATHALARTYPGGINAFVAAMNA KAQSLGMSNSRFYEPTGLDYRNVSTAHDLSRLVAAASKYPLIRRNSTSNYGAVSTASGSQ RYKNSNALVREGGWNIELQKTGYIREAGRSMVVKANVQNQPITIVLLNSPSSTTRVNDAR KIESWMLQRRS >gi|289656352|gb|ADEA01000015.1| GENE 75 77836 - 79110 252 424 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 [Bacillus selenitireducens MLS10] # 155 387 258 436 466 101 30 2e-20 MSEEKRSCSFCGKSEHEVKNLIEGEHAFICNECVETCGIMLHDSNPEPAEETEKKSLPTG KLPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRLRHPKANGNVELSKSNILLIGPTG SGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQRGIVY IDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDTTN ILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSKDENADITGLFEIVEPEDLIKFGLIPE LIGRLPVIATLAELDEDALVNILTEPKNALVKQYQTLFGMENVELEFEEEALRSIARQAM ERKTGARGLRSIVERCLLDTMYQLPDLKGVAKVVIGKDVIEKGEQPKLLCQDGSEYATKE KAAG >gi|289656352|gb|ADEA01000015.1| GENE 76 79361 - 81946 3823 861 aa, chain + ## HITS:1 COG:NMA1761 KEGG:ns NR:ns ## COG: NMA1761 COG1049 # Protein_GI_number: 15794654 # Func_class: C Energy production and conversion # Function: Aconitase B # Organism: Neisseria meningitidis Z2491 # 1 861 1 861 861 1696 98.0 0 MLEAYRKAASERAALGIPALPLNAQQTADLVELLKSPPAGEGEFLVELLAHRVPPGVDDA AKVKASFLAAVAEGSASSPLISPEYATELLGTMLGGYNIHALIELLDNDKLAPIAAKGLK HTLLMFDSFHDVQEKAEKGNKYAQEVLQSWADAEWFTSRAKVPEKITVTVFKVDGETNTD DLSPAPDAWSRPDIPLHALAMLKNPRDGITPDKPGEVGPIKLLEELKAKGHPVAYVGDVV GTGSSRKSATNSVIWHTGEDIPFVPNKRFGGVCLGGKIAPIFFNTQEDSGALPIEVDVSA LKMGDVVDILPYEGKIVKNGETVAEFSLKSQVLLDEVQAGGRINLIIGRGLTAKAREALK LPASTEFRLPQAPAESNAGFTLAQKMVGRACGLPEGQGVRPGIYCEPRMTTVGSQDTTGP MTRDELKDLACLGFSADMVMQSFCHTAAYPKPVDVRTHKELPAFISTRGGVSLRPGDGVI HSWLNRLLLPDTVGTGGDSHTRFPIGISFPAGSGLVAFAAATGVMPLDMPESVLVRFSGK LQPGVTLRDLVNAIPLYAIKQGLLTVAKAGKKNIFSGRILEIEGLPDLKVEQAFELTDAS AERSAAGCTVKLNKEPIIEYMKSNVVLMKNMIADGYKDPRTLERRIKAMEKWLANPELLE ADKDAEYAAVIEINMDDIKEPIIACPNDPDDVCFMSERSGTKIDEVFIGSCMTNIGHFRA ASKLLEGKSDIPVRLWMAPPTKMDAKELSDEGHYGVLGRAGARMEMPGCSLCMGNQAQVH EGATVMSTSTRNFPNRLGKNTFVYLGSAELAAICSKLGKIPTVEEYQSNIGIINEQGDQI YRYMNFNEIDSYNEVAETVNV >gi|289656352|gb|ADEA01000015.1| GENE 77 82760 - 86077 4579 1105 aa, chain + ## HITS:1 COG:PA4897 KEGG:ns NR:ns ## COG: PA4897 COG1629 # Protein_GI_number: 15600090 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Pseudomonas aeruginosa # 35 437 156 495 989 148 29.0 5e-35 MRNHPLTFKTIVACLSILWHSPHLWAADAFTPDTAVLDTIEVRGKRLTQDQKGEAQQYSK NVSNAYLGKEYLERYRPDAAGDILKGLNGVYNMNTRNAGSAITPSIRGIAGKGRIPVTID GTEQTVDVWMNNYGVADRNYVDPALFRSIAVEKSPSMTRGIKSGVGGSVAIQTIEPEDIV PEGKKWGIQIKGNFSGNTAKPRVDNLQYLGVEDYRTIPGRPTADGAAGAVAGTLEPYQAL DFQEKNPPRSRSSKIGNFKDDRSGMVSAAFKTDISDGLIAYSDRKKGNYFSGKRGAGGYL NNPEYDPDNADFGNTGATMIPNMAKLYRPGEEVFNSNVASKSLLLKNNWYLPNNQKISLG HMRTRVRFGENNPFYNAILLGFSNEFNFTGRPPLVIPAQTLNSTIDTKSHKIGYEWKPEG SRWIDLQANIWRTKTTSSRHQSGGPDLAVTYGDQEYDKWANCFVHNKIPNEFIGRHISEG IGCRELVAEGLVPAEEPKDPPPVPGAYRVKSGVEQRTRATRTGADISNRMRLTDKLAMTL SANVQYEKLDESNRITSNDKDIFDIIGAATAATAVAGPRAGRRHEWGAGVAFDWQATDRL NIQAGIRYDKFWAYDDALAKARRARKDPFYSVDLQGGKSSDGYILGSYIPYYELIANKEE ADDVRKILRTEDVDESNRLINEFRNKYGYDYNDKGYSINGERQTGEVIYANANGDNPQVD NPSFNHDEAVYRQKEVYTPYIDGKYQGPVFAQGQFNEKVNNPQGLQGSYFKYLTNAAIDD VKTPYLQKKERATAMGSTGGHRLYKKPANEDEVWPMPKHLKAGAWSPVIAVSYDLTDNSR LFARFAQATRFPSIYEATTTNVNLLEAYNTEFNLKPERSTNWEAGYSFNFAPYWQRLKHG NIRLTYYNNTIKNAIDITENKNLTQYDKKQTSGIELQSRIDSGKWFASFGANYRLKQRTC DKSTAFNYDVYNNRIPECIDGGFGATRFYQTMQPKYSLNLDVGTRRFNNRLELGMRGIYH STVDTDQQDKLARQGLARIMQASGRPYHWRSALVLDAYGRYNFGKNLSMNFSISNLTNRY YLDPMSNVPIPAPGRAVTVGFTGKF >gi|289656352|gb|ADEA01000015.1| GENE 78 86645 - 87565 1315 306 aa, chain + ## HITS:1 COG:no KEGG:NGK_1375 NR:ns ## KEGG: NGK_1375 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 49 303 2 259 268 264 60.0 4e-69 MKLKLLAAALALAASATVSAAPTGESSNYNTIDTRQPSTAIPFGAGKAALRINNSSIRIN IGDGPVKHINKKYGNRPINGANINGTANGLANPTYLTVKDVNPVISFFTNPTLGQVWYEK RAANVDVYSVRQITDVKLPIAPKFGGLVIGQVKNLPDNSGVYFGEWAPRASGTPVQNSTN LNMADARRTVWYAGDNPTGRTQGLATATYDVVGINKHTPGANDFYRGTVTAKFGTTTQGT MGGQIARGADRISFDKAKIDNTKGTFADTAQGMKGQFYGKGAAAMAGIATRKAGAADDVA FGGRKR >gi|289656352|gb|ADEA01000015.1| GENE 79 87666 - 89132 1715 488 aa, chain + ## HITS:1 COG:no KEGG:NGO0555 NR:ns ## KEGG: NGO0555 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae # Pathway: not_defined # 1 488 1 497 497 404 43.0 1e-111 MKNRACLFALLLPLSIPAFADDDDTRMLRDGVQRQIRQYQEAEAFSDGLSDESRINIGGE TYHVPHTEHDLALGIYYAVNDRQWNKVREFLTHYRTLSGHKPHLVLMAEGLLARSQGDVS GALEKMKAAQQAAPDDVRIGLELARLYGEDNQTREAKAGFEKVLQGGMPSETKETVQNYL DILDKRSRWHGDISVGRGYSDNINQGNGKRECVGELMGECFSYRSLPKPVGSAFWQYSAA ASKSVPLKGHHNLILRPIAYGSRFDRADTQSEPIEKYSENTALLSAGYQYADADDDLTLT PYFEHYFRGGRSRYRAWGADMNWERNLGRKWSVNARLEGKRVKYLESERGYYSDYSLYTS GAGLGYTFSDGLGLFGGIDLTRRKYPDAFARSREYTARIGGYKIFGNGIYLNAAALHRLS RYDEGSYHTDGKRRRDRQTIFTTALGASKWQFKYISPELRFKRTVSRSNSDFYVYRQNEI ALNLRYRF >gi|289656352|gb|ADEA01000015.1| GENE 80 89170 - 90069 781 299 aa, chain - ## HITS:1 COG:CAC3407 KEGG:ns NR:ns ## COG: CAC3407 COG1073 # Protein_GI_number: 15896648 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Clostridium acetobutylicum # 19 262 157 402 431 114 29.0 2e-25 MKTHFPTPAAPDETASYAQDGLTAEFYRGRQDAVSDQAVIILGGSDGNFKTTQQFAAAFA DHGLNTLALPYYGQPHLPKDLAQIPVETVETAAGWLHRRGFTRIGIWGISMGAQLALLAA SLIPAIGRVAAVSPLDVCVQGLQVSPRKRLLDCSAFTWRGQDLPYCPLRMNRRRVWRDSL KSLGLNMRSCYRSVATAAEEARIKIENINGAILLLTAGYDLMWPAHPSAQRMMRRLQRKH FAHPYSEQSYLHAGHFLFPDLPHIKKPFAATPLVYAKEHARSSRDAFEATVRFFREWAD >gi|289656352|gb|ADEA01000015.1| GENE 81 90201 - 90641 648 146 aa, chain - ## HITS:1 COG:VC0654 KEGG:ns NR:ns ## COG: VC0654 COG3154 # Protein_GI_number: 15640674 # Func_class: I Lipid transport and metabolism # Function: Putative lipid carrier protein # Organism: Vibrio cholerae # 19 132 24 137 175 75 37.0 4e-14 MALPEIVLPKWMGRIGAKLPGKPPRFILVSALNAMLKKGLLPADMELFAGRRFEIEVLDA GITVRFSADNQKFTDDNFNGTPDLRLAANGIDFMRMMMREEDPDTLFFNRKLQIEGDTEL GLITKNLLDSVDWPFGGWFLNKGASS >gi|289656352|gb|ADEA01000015.1| GENE 82 90628 - 91536 1216 302 aa, chain - ## HITS:1 COG:RSp0969 KEGG:ns NR:ns ## COG: RSp0969 COG0826 # Protein_GI_number: 17549190 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Ralstonia solanacearum # 3 292 5 288 294 251 43.0 1e-66 MKLSLGPVLFFWQKEALLEFYAAMLDAPVDTIYLGEVVCSRRQKMRFADWVSLAEDLAES GKEIILSSQVLLESESDLKRLRKITGQDKFKVEANDMGAVKLAREHGIPFVAGASLNIYN ESTLALFQKLGAYRWIAPSELSRDKVAEIIKVSDDIETELFAWGKMPLAYSSRCFTARHY NLNKDGCEFRCLDYEQGMDMNTREGKPFLTINGIQTMSYGCQNLLPHHEDLRQISVNMLR LSPQMHGMAEIIRLHRDVLDGKAAWADVRPELEKLAAGTLVDGYWRGQPGIEAVKEEYYG AA >gi|289656352|gb|ADEA01000015.1| GENE 83 91558 - 92604 1074 348 aa, chain - ## HITS:1 COG:RSp0970 KEGG:ns NR:ns ## COG: RSp0970 COG0826 # Protein_GI_number: 17549191 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Ralstonia solanacearum # 19 348 10 339 339 405 63.0 1e-113 MGDGIPSPDKEHEMRKIPELVCPAGNLPALKTAVDNGADTVYMGLKDATNARNFPGLNFD MKSAREGVAYAHARGRNVLMAINTFAQAGQVARWYAAVDTAAELGADAVIVADPAVMAYV AERYPNLRLHMSVQGSATNYEAINMMKELFGVRRAVLPRVLTVDQVKHVIDHTDVEIEVF GFGSLCVMVEGRCILSSYATGESPNMQGVCSPAKAVRWEQLPDRMNVRLNQVLIDQYKPD EPAGYPTLCKGRFEVNDETYYALEEPTSLNVLEMLPELIKIGVSAIKIEGRQRSPMYTAQ VTKSLRQALDAAAADPAHFKVNPVWNNALSKVSEGHQTTLGAYSRPWK >gi|289656352|gb|ADEA01000015.1| GENE 84 92866 - 94851 2424 661 aa, chain + ## HITS:1 COG:NMA1485 KEGG:ns NR:ns ## COG: NMA1485 COG4389 # Protein_GI_number: 15794385 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinase # Organism: Neisseria meningitidis Z2491 # 1 658 4 662 668 984 73.0 0 MKKLTSQNLGPMLAEHLPDTDFVLILNALIEFLRQGGKKRASVRFNLFLNSLEQDENLCR QFSQRFYGWLAQVHVYPALVKLGIFSRHSFTREMSIRIYERFNPSYKDFGNLREVFLYLF HSENDEKWLQQISLKQWLALSRLLRRHTDAALLQTASRQLVQARLRAMEMLAIWIASEAL EPDLIRLAPKLLEADSAFVALQRETAKLTEHYCNDTTPYDTAHLEVMFDQCRTQIDYLRR RGTGAGSGSSVKVAHLLERLQQTLDRLKLLIDIQTHPEDNRFKLTLLHSLTYAAVEQYST HYLRRSSIRMLAKSITENKSQHGEHYITRNKREYLNMFFSAAGGGILIALMALYKIHIGT LGFGQFATSVLSGLNYGIGFMLIHMLHCTVATKQPAMTAASFAEQVELNERGRAVENKLA KLLIDVCRSQSVAVFGNVTIAILLACIVSAAYAANTQQPLLDAHTVAYQMKSVDIITQPT LWYAAIAGLWLFCSGIIAGFFDNRADYLDLRNRLTINPLLRKIMPARARHAFAAYMHRHY GSLTGNFIFGMLLGMTGFFGHLLDLPLDIRHVAFSSANLGYAVVSGNLGAKAFLLGLAGV LAIGAVNLMVSFTLALFVALRSRGTKISSISKLLNSVWAQIKANPLLLVYPVQAKDGQEN K >gi|289656352|gb|ADEA01000015.1| GENE 85 95002 - 95532 422 176 aa, chain - ## HITS:1 COG:no KEGG:NMB1225 NR:ns ## KEGG: NMB1225 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis # Pathway: not_defined # 13 176 12 171 171 130 51.0 1e-29 MNILFKTSLAAVLALAAAQSAEAGSKIYTCEINGEIVYTSRASGNCHSADLPSIGRYSSS RYDSPMPSETRTQPEPQYRPVQKRSAARAGMPKPQPVQQAPVIAAPKSPGNSSRRAILEQ ELANERRALSDAQKSLAQARGAKGGSIDQQQISTLQSSVLDRQQNIQALQRELGRM >gi|289656352|gb|ADEA01000015.1| GENE 86 95546 - 95890 131 114 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298369186|ref|ZP_06980504.1| ## NR: gi|298369186|ref|ZP_06980504.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 114 1 114 114 172 100.0 5e-42 MSSIIKSSGCLLASAFVLGLPPYSAAAVYTCISASGGKTYTSERTSACEAGDLPRIGSYQ GYRLKEAKAKPEKRRTKAAGQSRRSGRETKPIPAKNKRPSEKGRGYSGFPATDN >gi|289656352|gb|ADEA01000015.1| GENE 87 96088 - 98016 2782 642 aa, chain - ## HITS:1 COG:NMB1226 KEGG:ns NR:ns ## COG: NMB1226 COG0488 # Protein_GI_number: 15677098 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Neisseria meningitidis MC58 # 1 639 1 639 640 975 82.0 0 MIELKNLTLQRGSKLLLDKANLTVSPQRRVGLVGRNGTGKSSLFALIKGEIAQDGGDVLL PAHWKLASVAQETPALDISALDYVLQGDGELQLFQTALQEAEAKNDGMKQAEYHAKLEEI DAYSAPARAAKLLSGLGFSQEEHGRPVKSFSGGWRMRLNLAQALMCRADLLLLDEPTNHL DLETVLWLENHLSGLPCTQIIISHDRDFLNAATTQTVELSDQKLTLYGGNYDFYQAERAR RLAQQQAAYLKQQAQIKHLQSFIDRFKAKATKAVQAQSRMKALDKLERIAPAHFDSGFSF EFDSPAHLPNPLLQLDKADLGYGGEPVLNGIDLSLESGARYGLLGVNGSGKSTFIKTLAG ELNVSSGRIVRSDKLNIGYFAQHQLDTLRPDQSPLWHIQKLSPDVREQEIRNFLGSFNFV GDAALQKTEPFSGGEKARLALAMIVWQKPNLLLLDEPTNHLDLDMRHALTLALQSFQGAL IVVSHDRSLLEATTDSFLLIEQGRLKTFDGDLEDYRRYRLAQENAAAAPAASAQSRNRKD AKRVEAQIRQEKARLGKPLQQKINQAEKEMAALGEIQTACEAFLAQEDAYSDANKAKLQQ TLAQLAETKVKLSELEESWLGWQEELEQILAQIDAQYAQTAS >gi|289656352|gb|ADEA01000015.1| GENE 88 98147 - 99076 1455 309 aa, chain - ## HITS:1 COG:NMA1470 KEGG:ns NR:ns ## COG: NMA1470 COG0523 # Protein_GI_number: 15794371 # Func_class: R General function prediction only # Function: Putative GTPases (G3E family) # Organism: Neisseria meningitidis Z2491 # 1 308 1 308 308 612 97.0 1e-175 MSEVKKTKVHLISGFLGTGKTTALKSLMEQKDPNEKWVIIVNEFGEIGIDGAVLSDNGIP VAEIAGGCLCCTAGPQMGVTVQKMLRDAKPDRLMIEASGLAHAASVIDELKAKPLDSLLE IGAVFTVVDPRQFINPDYAQQALYKDQIGICDVLVASKTDLCTPEQLAEFHDKAAKLFPP KAKVVEVQNAQLDIQWLDIPVIEKSRYRLKALPDNTMGFQSQGFTFPAGRDFDGEKLTNF FNDLPKFTDGLVRAKGVFQVLGTWVWLNWVDGQWGANQVSWRRDSRFELIAKSFDADLIE KKLQEALEK >gi|289656352|gb|ADEA01000015.1| GENE 89 99064 - 99537 508 157 aa, chain - ## HITS:1 COG:NMA1471 KEGG:ns NR:ns ## COG: NMA1471 COG0735 # Protein_GI_number: 15794372 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Neisseria meningitidis Z2491 # 5 157 6 158 158 266 96.0 1e-71 MDTIKQKILEQARRDGVQVTALREQVLDIVLQQSGVIKAYNVLSQMQQQSEGVVAPPTAY RALDFWAEQGVLHKVAAVNGYILCSHAQHECDDHCHDHEEAEAHHSAFILVCTECGTADE QTLSHEWAALCAGVAESGFALKEEHVVLTGICKKCQK >gi|289656352|gb|ADEA01000015.1| GENE 90 99582 - 100409 1298 275 aa, chain - ## HITS:1 COG:NMB0924 KEGG:ns NR:ns ## COG: NMB0924 COG4221 # Protein_GI_number: 15676819 # Func_class: R General function prediction only # Function: Short-chain alcohol dehydrogenase of unknown specificity # Organism: Neisseria meningitidis MC58 # 1 275 1 273 273 431 74.0 1e-121 MAILITGASAGFGEAMCRAFTAAGFNVVGAARRMEKLQALAEELGGSFYPLQMDVADTSS VPAALQSLPEGFKEIDCLINNAGLALGLDSADKADFADWQTMIQTNIVGLTFLTRQILPQ MVERKSGYIINIGSIAGNYPYPGGNVYGATKAFVRQFSLNLRADLAGTGIRVTDIEPGLC GGTEFSNVRFKGDDERAAGVYENIRFIRPEDIADTALWLYHRPAHMNVNTIEIMPVAQSF GALPVVREIPPAPEPEESFEKQSTSLFAKIKSWFK >gi|289656352|gb|ADEA01000015.1| GENE 91 100557 - 101018 576 153 aa, chain + ## HITS:1 COG:NMB0923 KEGG:ns NR:ns ## COG: NMB0923 COG3909 # Protein_GI_number: 15676818 # Func_class: C Energy production and conversion # Function: Cytochrome c556 # Organism: Neisseria meningitidis MC58 # 21 153 19 152 152 161 71.0 5e-40 MKIKKTPFVPALAAVFILCACGGGQPAQPKGPISEDRTAAFKSMMPEFVSMRKMIKGDEV YQVEKFKQAAAVFAENSKKPFEHFQSDPQGNGEALPAVWQNPEKFKAAEEKFRAAVEKLN EKAQGGNLEEIKAAYGEVAASCKACHDSFRMKE >gi|289656352|gb|ADEA01000015.1| GENE 92 101137 - 102411 2286 424 aa, chain - ## HITS:1 COG:NMB0671 KEGG:ns NR:ns ## COG: NMB0671 COG0281 # Protein_GI_number: 15676569 # Func_class: C Energy production and conversion # Function: Malic enzyme # Organism: Neisseria meningitidis MC58 # 1 421 1 421 426 770 94.0 0 MEESLKEAALRFHEFPVPGKVSVTPTKSLSTSQDLALAYSPGVAAPCMEIHADPQNAYKY TAKGNLVAVISNGTAVLGLGDIGALAGKPVMEGKGVLFKKFAGVDVFDIEINEKDPQKLV DIIAALEPTFGGINLEDIKAPECFYIERELRKRCKIPVFHDDQHGTAIITAAAVLNALRF TGRNIEEATLVCSGAGAAAIACLNQLLALGLKRENVTVCDSKGVIYKTREDKDRIDESKK LYAIEDNGQRVLADAVKGKDIFLGLSGANLLTPEMLNTMNAKPIVFAMANPNPEILPPLA KETRSDVIIGTGRSDFPNQVNNVLCFPFIFRGALDVGATTINEEMKLACVYALADLAMEE VSEEVVAAYGKKFEFGADYLIPTPFDRRLISRVATATAKAAMESGVATRPIADLAAYAAK LEAM >gi|289656352|gb|ADEA01000015.1| GENE 93 102648 - 103283 833 211 aa, chain - ## HITS:1 COG:NMB0670 KEGG:ns NR:ns ## COG: NMB0670 COG0125 # Protein_GI_number: 15676568 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate kinase # Organism: Neisseria meningitidis MC58 # 1 205 1 205 206 331 79.0 7e-91 MNPRFITLDGIDGAGKSTNLAVMKQWFEARRLPVLFTREPGGTPTGEALREILLNPETKA GLRTETLLMFAARQQHLEDVILPALKNGIHVVSDRFTDATFAYQGGGRGVPLQDIETLEN WVQGSFRPDLTLLLDVPLEVSLERIGRVREKDRFEREQADFFTRVRNAYFSRAAANPERY AVIDGNRSPEAVRTSIEAALEAHFGFIGQAV >gi|289656352|gb|ADEA01000015.1| GENE 94 103390 - 104385 1542 331 aa, chain - ## HITS:1 COG:NMB0669 KEGG:ns NR:ns ## COG: NMB0669 COG1559 # Protein_GI_number: 15676567 # Func_class: R General function prediction only # Function: Predicted periplasmic solute-binding protein # Organism: Neisseria meningitidis MC58 # 1 331 1 331 331 521 76.0 1e-148 MLNKSLKWLAVFFVAVAAVFAALLFVPKDNGKTYRIKVEKNQGISAVSRKLAEDGVVFNR YVIVAAAYLTGAHNDLRAGSYRLPVKISAWNVLKKLRGGRPDSVTVRIAEGMRFADMRYV INDTEDIGHETRGWSNAKLMQAVAPEAADMNPEGLFFPDTYEIDTDSSDIQIYKSAYQAM QNRLKDAWEGRQDGLPYKTPYEMLIMASLIEKETAHEDDRAHVASVFVNRIEAGMRLQTD PTVIYGMGDAYKGKIRKADLRRDTPYNTYTRDGLPPTPIALPGKAALEAAAHPSAEKYLY FVSKMDGTGLSQFSHTLNEHNAAVRKYILKK >gi|289656352|gb|ADEA01000015.1| GENE 95 104496 - 105056 691 186 aa, chain + ## HITS:1 COG:NMA0867 KEGG:ns NR:ns ## COG: NMA0867 COG3023 # Protein_GI_number: 15793836 # Func_class: V Defense mechanisms # Function: Negative regulator of beta-lactamase expression # Organism: Neisseria meningitidis Z2491 # 8 186 9 187 190 273 71.0 1e-73 MDTTPNLWQNGWWQPARRASSPNFCAREAGEKISLAVLHNISLPPFEYGTGAVEKLFTNS IDEAEHPFYSIIKDLRVSSHFFIARTGETVQFVSCNDTAYHAGVSSFDGREKCNGFSVGI EIEGCDFEPFTEAQYAALLPLLSALMEQYPIEAVTGHQNIAPDRKTDPGHFFDWPRLEAA GFPVRR >gi|289656352|gb|ADEA01000015.1| GENE 96 105185 - 106444 2117 419 aa, chain + ## HITS:1 COG:no KEGG:NMCC_0620 NR:ns ## KEGG: NMCC_0620 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_053442 # Pathway: not_defined # 1 419 4 431 431 515 62.0 1e-144 MIYFIVLALVAILAVIAYNMYQESQYRKQVREQFGHSDKDALLGSKTDNVRDGRQASGGK GLMSRKAAKPQQNAAMRNLQEQDALFAARVAQAAATKPEVEIAVEDDFTDEPVKHTTIGL NNEMTTQTEDIFAAVSAPDAGRTLVSLDELVQIELPWFDPRFDYLAYIALTEAQELHALP RLSNRHRFQIIGCTMDDRFQVAEPIPSVYYQGFIMGLQAVSRNGLASREELELFNQQVDT FAQLMGGKVMHTDVAAFTEVAQALDEFCARVDQTIAIHLVSRSSISGTELRSAVESVGFR LSEDGQFHFPGNNNDTMFSLSTLDNSPFTPSLLSHQPYRGFSMLFDIPHIPAGEKTFDRF MDLAVKLSGQLSLDLVNDKMEELSTQWLKDVRSYVLARQEEMQKVGIKPGSRQAQRLFS >gi|289656352|gb|ADEA01000015.1| GENE 97 106591 - 109083 3079 830 aa, chain + ## HITS:1 COG:NMA0865 KEGG:ns NR:ns ## COG: NMA0865 COG0272 # Protein_GI_number: 15793834 # Func_class: L Replication, recombination and repair # Function: NAD-dependent DNA ligase (contains BRCT domain type II) # Organism: Neisseria meningitidis Z2491 # 5 823 27 841 841 1465 91.0 0 MNPTAQRIKHLTALLNRYAYEYYTLDAPSVPDAEYDKLFRELEALERNHPELKLPDSPTQ RVGGEPLAGFAEVRHEVPMLSLTNAFSPQDENGVFDHAEMYAFDQRVRDGLDGGNPEYVI EPKFDGLAISLLYRDGVLVQAATRGDGTTGEDVTQNVKTVANIPLRLHGENTPELIEVRG EVLMLKADFAALNKRQAENGQKPFANPRNAAAGSLRQLDSRITAQRKLHFFPYSVARQQG GFVAEEHIQELAYFQELGFSLPNGNFGCFKNIDEVLAFYEQMQQKRPELPYEIDGMVVKV NSLAQQRELGFISRAPRWAIAHKFPAEEALTVVEAIDVQIGRTGTVTPVARLQPVFVGGV TVTNATLHNQDEVSRKDVRVGDTVVVRRAGDVIPEVVRVIFERRPMQETAVAVSDGLKHQ QDDLFAETPSANQTQSVPLHKPYRLPTHCPICHSEIEREEGEAVARCSGGMLCQAQRAQG LIHFASRKAMDIDGLGQKQIEQLVAQDLVRHFADLYRLDIPTLQKMKETADKGSSENENG DAETVSDDLSESNTQNGKKQPTKWAENILAGIEASKTPELARFLFALGIRHVGERTAKTL AQAFGSLEHVRRAPEPILACLPDIGTVVARSIAHFFAQDAQQAMIDELLAAGVAPQTQAV TIPPARHAEPQRWIARLPGFKISENKAQALWELAGKSIEGLQTDKALPADWQAWRSETQN AVLLENLKTFFAQTSSENQDEVFSDDLNEAVAGKTFVLTGTLPILKRDQAQALIEAAGGK VSGSVSKKTDYVVAGEAAGSKLEKANALGVAVLSEGELLELLGKDAGEAV >gi|289656352|gb|ADEA01000015.1| GENE 98 109357 - 110391 1173 344 aa, chain + ## HITS:1 COG:AGl573 KEGG:ns NR:ns ## COG: AGl573 COG3049 # Protein_GI_number: 15890402 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Penicillin V acylase and related amidases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 26 165 58 204 355 77 35.0 3e-14 MCTTFAVNGSRLFGQNYDFYFGHGYLFFNPRGLQKFTLTKPPQQPLTWRSRYSSITFNQF GCEFPIGGMNEAGLTAAIMFDEDGSFPPREAGSSLNELQWLQYQLDNFATVAEVKEHLGR SIPYAEFMPLHYSLADRDGRSMTVEFTDGKPVLHEFGTFHVLTNNNLEKTIAVPQAKSEE EITEERDISVKRFKILTDILTHARPDEADVGQAFGWLDKISFKNKPYEIGYRWFSRADAP SYTFWSIVYDIKNLTVHFKTLGHPAVKTIALRDAAALYRGTAMLDMDTAQTGDVTASFVP FDTALNRLLIERSYLPMVPDLSEAFIDLLSTYPTKFAQTPPASV >gi|289656352|gb|ADEA01000015.1| GENE 99 110538 - 111500 655 320 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298369199|ref|ZP_06980517.1| ## NR: gi|298369199|ref|ZP_06980517.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 320 1 320 320 520 100.0 1e-146 MEHSEQQPAQQTLAQQPRLLETPRRVKASQGMKWISQAWKIYRRNKIKWPAMFLVFLFAQ WLGQGLFFLCLYVGISPSQHSNTSFSIFSILFLLAAPLLLFLGTWISMLFSGGIMYACNR SAIYGELKSSYLFAAFATKKRAFFIFLLLSIVVGIAIISFMAAFKSGMITTEPNPAASFL ILLIAAVFIIFFISLWMSIWFATCLIMLHDVKPWAAMKMSFTACLRNIPAGIVNILMWIV IYIGLTVGIYTIVGIAGIVIGVFVLLFGETAPSFAGAGIVAFGIIAYIVMILSALILAVL VIINIYTAYRNLLTDAPLEN >gi|289656352|gb|ADEA01000015.1| GENE 100 111585 - 112457 1376 290 aa, chain + ## HITS:1 COG:NMB0638 KEGG:ns NR:ns ## COG: NMB0638 COG1210 # Protein_GI_number: 15676538 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose pyrophosphorylase # Organism: Neisseria meningitidis MC58 # 1 289 1 289 289 520 88.0 1e-147 MKPIKKAVFPVAGMGTRFLPATKASPKEMLPIVDKPLIQYAVEEAVKAGCTEMVFITGRN KRSIEDHFDKAYELETELGMRNKNNLLEHVRDILPPNITCLYIRQAEALGLGHAVLCARA AVGDEPFAVILADDLIDAPQGALKQMVDIYNKSGNSVLGVETVEPSQTGSYGIVEVEKLK NFQRITNIVEKPKPEEAPSNLAVVGRYILTPRIFDLLTNLPRGAGGEIQLTDGIARLLDH EFVLAHAFEGKRYDCGSKLGYLEATVAYGLKHPETGAQFGELLKRYAADS >gi|289656352|gb|ADEA01000015.1| GENE 101 112533 - 113990 1225 485 aa, chain - ## HITS:1 COG:NMB0661_2 KEGG:ns NR:ns ## COG: NMB0661_2 COG0168 # Protein_GI_number: 15677999 # Func_class: P Inorganic ion transport and metabolism # Function: Trk-type K+ transport systems, membrane components # Organism: Neisseria meningitidis MC58 # 3 485 1 483 483 640 72.0 0 MYKVIPIIHVLSKLGLLFSMLLLVPTLMSYFFLDSAFPAFAYTALVTTIGSCTAWVLTLR FNRELRPRDGFTLVLMLWLAFAAVAAMPIYFYMPNMSFTDAFFEAMSGLTTTGSTVMNSL DTLAPSVNFWRHMLNWLGGMGIIVLAVAILPMLGVGGTQLFKAEIPGMDKESKMAPRISQ VAKKLWFSYTLTTAAAFVSLHLAGMSWFDALCHAMSAVALGGFSTHDDNIAYFNSVSIEW VLIFFTVFGAINFVSHFAAFANRSLKVYWRDEECRVLLSILSGSIVVSAVYLWYMEYYPS LADSIRFTAFNFVSVGLASGFSNADFAKWPLMISLWMFFLSNVLASSGSMGGGIKNVRGL VMFKFSVREMMILLHPRAVRTVKVNGRSIQERMALAVMSFIFIYFMTVVIFSFLMMAAGL DFLSAFTAVIACITNAGPGLGAVGPEHNYAVLSDVQKWLCATVMLLGRLEIFTVLILFTP AYWKK >gi|289656352|gb|ADEA01000015.1| GENE 102 114265 - 114540 442 91 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|241759775|ref|ZP_04757875.1| ribosomal protein L31 [Neisseria flavescens SK114] # 1 91 1 91 91 174 87 2e-42 MKQNIHPENYRTVLFYDGGANEGWLIRSCADTHGKTMVWKDGKEYPLFSLDTSSASHPVY TGKRRNVNVEGRASKFNQRYQSMMSAFRKDK >gi|289656352|gb|ADEA01000015.1| GENE 103 114540 - 114665 211 41 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15676834|ref|NP_273979.1| 50S ribosomal protein L36 [Neisseria meningitidis MC58] # 1 41 1 41 41 85 100 1e-15 MQVLSSLKTAKQRHRDCQIVRRRGKVYVICKSNPRFKARQR >gi|289656352|gb|ADEA01000015.1| GENE 104 114907 - 115398 821 163 aa, chain - ## HITS:1 COG:NMA0891 KEGG:ns NR:ns ## COG: NMA0891 COG0782 # Protein_GI_number: 15793860 # Func_class: K Transcription # Function: Transcription elongation factor # Organism: Neisseria meningitidis Z2491 # 1 163 1 163 163 285 92.0 2e-77 MSTETKNYITPVGWQALKDELYRLVHKERPEIVQVVNWAAGNGDRSENGDYLYGKRRMRE IDRRIRFLTKRLEAAVVVDPEQREPTEQVFFGATVCLLRGDGSEQTVRIVGADEIDTAQN KISWISPLARCLIKAREGDEVVLNGPEGREEIEILSVEYIRID >gi|289656352|gb|ADEA01000015.1| GENE 105 115486 - 117027 1900 513 aa, chain - ## HITS:1 COG:NMB0690 KEGG:ns NR:ns ## COG: NMB0690 COG0034 # Protein_GI_number: 15676588 # Func_class: F Nucleotide transport and metabolism # Function: Glutamine phosphoribosylpyrophosphate amidotransferase # Organism: Neisseria meningitidis MC58 # 1 513 1 514 514 903 88.0 0 MCGVLGLVSYEPVNQPLYDGLQMLQHRGQDAAGIVTAEGSVFHMHKGKGMVREVFRTRNM RDLVGNAGIAHVRYPTAGNAGSSAEAQPFYVSSPFGIVLAHNGNLTNTAELYENVCYKHL RHINTSSDSEVLLNVFAHELRQEVSKNADNHLTVDNIFNAVAQVHRLVSGAYGVVAMIAG YGMVAFRDPYGIRPLVLGTQDGGGGRKAYAVASESVAFNALEFDLERDIAPGEAVFISFD GRFFSRQCSDRHTLSPCLFEYVYFARPDSVIDGVSVYQARMDMGVALAEKIRRELPVGDI DVVMPIPDTSRPSAMELAVHLNKPYREGLIKNRYIGRTFIMPGQATRRKSVRQKLSPMET EFQGKSVLLVDDSIVRGTTSREIVEMVRAAGARKVYIASAAPEVRYPNVYGIDMPTREEL IANGRSAEEIAAEIGADGIVFQNLDDLEHVVKKLNPCIRSFDSSCFNGVYQTGDIDEAYL ARLSAEKSGCGGLKVYPSKMEHSISVSDTADEE >gi|289656352|gb|ADEA01000015.1| GENE 106 117141 - 117644 570 167 aa, chain - ## HITS:1 COG:NMB0691 KEGG:ns NR:ns ## COG: NMB0691 COG1286 # Protein_GI_number: 15676589 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein, required for colicin V production # Organism: Neisseria meningitidis MC58 # 1 148 9 157 165 135 53.0 2e-32 MLAGCVILICVLMSMMRGAVAEAASLGIWVVAFFVAKGFAVPFADIAFKSFQPLLAKGLS FVMLFFGAWLVQRLLLALTTSALSAAGLGGVNRALGAMFGAVKGILLVTLVVMVCSLTDL PKTEGWRRSFSIPYFEYLAQSAVPYLPGKGLGEQAADTDMQLLQLNR >gi|289656352|gb|ADEA01000015.1| GENE 107 117661 - 118836 1072 391 aa, chain - ## HITS:1 COG:no KEGG:NMC0643 NR:ns ## KEGG: NMC0643 # Name: tpc # Def: putative tetrapac protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 391 1 332 332 94 37.0 8e-18 MSDDKQKEMLSGYEQLKRKNRRRLVGASGLVLVSGILLAGALYTGADKEPSAETAAASAP VENVAASAEEPEVAIWEPNSSGSARQVPASEAASSARQSADAASADAEAAPAADMKAEEG APVVLINDTLVDNGTEDRADKPKAASAPRKPETQVARRSEAEEETVIEDTMAEDTADSGV EQPDEAQRAEERRRRLAEQRAAAKRAEREAAVKKQRAEREAAKRRAAKLAAEKRAAERRE AEQQAEARKEQQYAVGAAEYRRVEPARTDKPKEQQPVRKAEAKPEAVRPEPKSEARKPAA PAAPTAESKTVAAKGKGGKAAIQAGYPEKERALSLQRKMKAAGINAGILEVNTDKGKVYR VKTGSYPNRAAAEHDLNRMRVHGIGGTVIEE >gi|289656352|gb|ADEA01000015.1| GENE 108 118848 - 120125 1543 425 aa, chain - ## HITS:1 COG:NMA0896 KEGG:ns NR:ns ## COG: NMA0896 COG0285 # Protein_GI_number: 15793864 # Func_class: H Coenzyme transport and metabolism # Function: Folylpolyglutamate synthase # Organism: Neisseria meningitidis Z2491 # 1 424 1 424 424 738 83.0 0 MKTLQEWLSHLETAHSAGLIDMGLERVGEVKKRMGLQPQCPVVVVAGTNGKGSVCAYLSQ IYTQAGFKVGTLTSPHLLRYNERIAVNTRPVEDAAIVASFERIEAARAGISLTYFEFNTL AAVDIFIREKVDVMVLEVGLGGRLDAVNVFDADCAVVTSVDLDHQAFLGDTVEQVAFEKA GVFRSGKPAICGQTPPPESLRRHAGEIGAELLLIKRDFDFSTLENVQWSYRYHPQNSDGR TRNRNALPFPALRGAYQLSNAACALTVLECLGDRLPVDIAAIKRGLLLVENPGRFQVLPG RPLTVLDVGHNPHAARALRRSLINLMFAEKRTAVFSILADKDIDGVLDIVKDQFDEWHIA PLDVPRGMTAEALVRKLSEHGIENVKVFENIEKAYRAALEKAGENDRIVVFGSFHTVAAV MAALS >gi|289656352|gb|ADEA01000015.1| GENE 109 120208 - 120549 127 113 aa, chain - ## HITS:1 COG:no KEGG:NMB0694 NR:ns ## KEGG: NMB0694 # Name: folI # Def: FolI protein # Organism: N.meningitidis # Pathway: not_defined # 1 112 37 143 148 98 43.0 8e-20 MMWAGLAALAASFAHALRVQRFRYRNAVRRIEVDRLQQATVCIDGGQTCLSAVLCDESVV SRHAMFLTWDTGGRKIRHLVLPDMTTREEYRLLSVWARWCRSGEGRPSETAEQ >gi|289656352|gb|ADEA01000015.1| GENE 110 120662 - 121021 541 119 aa, chain - ## HITS:1 COG:no KEGG:NMC0646 NR:ns ## KEGG: NMC0646 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 118 6 123 124 165 67.0 4e-40 MYFVDRTAVVLKPTARFLDWLNHIDEEGVNLTLEQLRTNCSVFLVPEFETPEEVVAYFDE RYAEVFKAEVSGWAVDEAAWPKDMSLKAFWEFFEVEIHDLVVDMEEGELSLDPVFDDMG >gi|289656352|gb|ADEA01000015.1| GENE 111 121095 - 121823 607 242 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 239 1 242 245 238 47 2e-61 MIKFKNVHKHFKDLHVINDVSLEVGQGEVVVVCGPSGSGKSTLIRTVNQLESIESGEIWV DGINVADPKTDLNKVREEVGFVFQSFNLYPHLTVLENIILSPMKVKKQSLEQAQKKAMEL LERVGLAHKKDALPSQLSGGQQQRVAIARGLAMEPRVMLFDEPTSALDPEMVGEVLKVMK DLAESGMTMMCVTHEMGFAREVADRVIFVDHGRILEEGSPEEFFTHPKHERAKQFLQQVM TH >gi|289656352|gb|ADEA01000015.1| GENE 112 121841 - 122620 1061 259 aa, chain - ## HITS:1 COG:NMA0902 KEGG:ns NR:ns ## COG: NMA0902 COG0030 # Protein_GI_number: 15793868 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Dimethyladenosine transferase (rRNA methylation) # Organism: Neisseria meningitidis Z2491 # 1 259 1 259 259 474 95.0 1e-134 MKEHKARKRFGQNFLQDTRIIADIVNAVRPQADDVVIEIGPGLAAITEPLAKKLNRLHVI EIDRDIVGRLKTLPFADKLVIHEGDVLQFDFNGIAGKKKIVGNLPYNISTPLLFKLAEVA DDVVEMHFMLQKEVVERMVAAPKSNDYGRLGVMLQYFFDMELLIDVPPESFDPAPKVDSA VVRMIPVKHRIGKADDFEHFAKLVKLAFHQRRKTIRNNLKEFAGDEDLQAVGISPQDRAE HIAPEKYVELSNYLVRKAV >gi|289656352|gb|ADEA01000015.1| GENE 113 122757 - 123353 739 198 aa, chain - ## HITS:1 COG:NMA0802 KEGG:ns NR:ns ## COG: NMA0802 COG0424 # Protein_GI_number: 15793776 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Nucleotide-binding protein implicated in inhibition of septum formation # Organism: Neisseria meningitidis Z2491 # 3 197 4 198 201 226 54.0 2e-59 MNLYLASGSPRRREILENLGFKVIRIPADIDETPHSGENAANYVQRMAREKNAAAVAQWF AAYGEPPEYPILTADTTVAYQNHILGKPETEAQAAEMLARLSGRTHQVLTAVCVYWQGKT RGVLQTSDVRFKTLSAEEISAYIRSGEPMDKAGAYGIQGLGGVFVEHLQGSFTGVMGLPV YETAALLKQFGSGVPPFA >gi|289656352|gb|ADEA01000015.1| GENE 114 123590 - 123868 242 92 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298369214|ref|ZP_06980532.1| ## NR: gi|298369214|ref|ZP_06980532.1| hypothetical protein HMPREF9016_00884 [Neisseria sp. oral taxon 014 str. F0314] # 1 92 1 92 92 178 100.0 1e-43 MAKRNLKYIECYTDNLHIFFGLFLKISFATFAINFVLSVFLVPPKYFLGEAHVFPVDAVS VSSVILSEILYWRRIKKILDAKDPSDSREGEG >gi|289656352|gb|ADEA01000015.1| GENE 115 123899 - 124435 794 178 aa, chain - ## HITS:1 COG:NMA0833 KEGG:ns NR:ns ## COG: NMA0833 COG0663 # Protein_GI_number: 15793804 # Func_class: R General function prediction only # Function: Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily # Organism: Neisseria meningitidis Z2491 # 1 174 1 174 176 287 78.0 7e-78 MNPVRPFLNHIPQIHESCLIDETSVIIGEVSLAEDVSVWPYAVLRGDVNSISIGARSNVQ DGSVLHVSHKNAEKPEGSPLIIGEDVTVGHKVMLHGCRIGDRVLIGMGTIILDDTVVEND VMIGAGSLVPPRKRLESGYLYVGSPVKQVRLLTEKEKEFLKYSSAHYVRLAWQHRQSE >gi|289656352|gb|ADEA01000015.1| GENE 116 124510 - 125889 2044 459 aa, chain - ## HITS:1 COG:NMB0637 KEGG:ns NR:ns ## COG: NMB0637 COG0165 # Protein_GI_number: 15676537 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate lyase # Organism: Neisseria meningitidis MC58 # 3 459 2 458 458 857 92.0 0 MSNDKTWSGRFNEPVSELVKKYTGSIDFDKRLAEWDIQGSLAHAQMLAKAGVLSLDDLTA IRQGMAEIIAEIEAGKVEWSLDLEDVHMNIERRLTDKIGDAGKRLHTGRSRNDQVATDIR LWLRDQITVIQDLIRSLQTALVDLAEQNAETVMPGFTHLQVAQPVSFGHHMLAYVEMLGR DFERMTDCRKRVNRMPLGAAALAGTTYPIQREITAELLGFEQICQNSLDAVSDRDFAVEF TAAASLIMVHLSRLSEELILWMSPRFGFIDIADRFCTGSSIMPQKKNPDVPELVRGKSGR VIGHLIGLITLMKSQPLAYNKDNQEDKEPLFDTADTLIDTLRIYADMMRGVTVKPDNMRA AVMQGFATATDLADYLVKKGMPFRDSHEVVAQAVRHADQAGVDLSELPLEVLQGFSNLIS DDVYGVLTPEGSLNARNHLGGTAPEQVRFQVKRWRQLLA >gi|289656352|gb|ADEA01000015.1| GENE 117 125966 - 127006 1180 346 aa, chain + ## HITS:1 COG:PA5262 KEGG:ns NR:ns ## COG: PA5262 COG2972 # Protein_GI_number: 15600455 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein with a C-terminal ATPase domain # Organism: Pseudomonas aeruginosa # 117 333 138 350 358 127 35.0 4e-29 MSIIRQIGSSFAVADLRNFATTARMLIAAFTALLLFPLLTNSSMSYAEEVNKNMLWVIPV LILVMLKAYIIHHFAPRLHNSPHAFYYAFILNQVIFLFVDVLVLQESGGAFIQHFCMFNL FMLSFMYIEAARRNSLAPSLSEARLSALTARIRPHFLFNSLNAAISLIRLRPYDAETLLE NLANLFRAQLRDGSQNSTLGQEIEWAQEYIAIEQIRMGHTRVQVMWQHHAPDDAETPHLL LQPLLENAVFHGIETTHRPGIITVMTQLHKSSIYIRIENPFIPPENSENAKPHKGNSMAL RNLKERLTLMYDSDAKIQSRELDGTFRVDIRLPYRKKTSDVNRLFG >gi|289656352|gb|ADEA01000015.1| GENE 118 127195 - 127941 1140 248 aa, chain - ## HITS:1 COG:NMA1709 KEGG:ns NR:ns ## COG: NMA1709 COG0765 # Protein_GI_number: 15794602 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Neisseria meningitidis Z2491 # 1 248 1 248 248 343 82.0 2e-94 MDFRFDIIYEYREMFLYGVLTTLGLTVIGTLGGSILGLLLALARLIHLEKAGAVLRAAVW LVRKISLLYVTLFRGTPLFVQIIIWAYVWFPIFVHPVNGILLSGEEANELRKAYGPLIIG SLALIANSGAYISEIFRAGIQSIDKGQMEAARSLGLNYRQAMRYVVLPQALRRMLPPLAS EFITLLKDSSLLSVIGVVELLAVQKAISGRYSVYEEPLYTVALIYLVLTTCLGWMFLRLE NRYNQPRR >gi|289656352|gb|ADEA01000015.1| GENE 119 128282 - 129634 2317 450 aa, chain + ## HITS:1 COG:NMB1664 KEGG:ns NR:ns ## COG: NMB1664 COG0826 # Protein_GI_number: 15677513 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Neisseria meningitidis MC58 # 1 449 1 449 451 902 96.0 0 MKAPELLLPAGGLERMRAAYDYGADAVYAGSPRYSLRARNNEFAKLDVLEQGIKEAHERN KKFFLTVNTLPHNSKLKTFVADMEPLIAMRPDALIMADPGLIMTVREKWPEMPIHLSVQA NTTNYWGVKFWQNIGVERIILSRELSMEEIAEIRQECPDIELEVFIHGALCIAYSGRCLL SGYFNHRDPNQGTCTNSCRWDYKVHNATESDAGDAQLLQGFNFEKAQEEANQNFEGINGQ KRHPYADKVFLIEESNRPGEMMPIMEDEHGTYIMNSKDLRGIEVVEKLAKIGVDSLKVEG RTKSLYYVARVAQSYRKAIDDAVAGRPFDYGLLSELEGLANRGYTSGFLERHQTQDYQNY LSGHSTAKQSQYVGHVTEIDAEGWATVEVKNRFAVGDTLEIIHPEGNQTVTLEQMTRKGA AVEVAPGNGIQVKIPNMQGKEKALLARVIK >gi|289656352|gb|ADEA01000015.1| GENE 120 129687 - 129887 382 66 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|255067577|ref|ZP_05319432.1| ## NR: gi|255067577|ref|ZP_05319432.1| conserved hypothetical protein [Neisseria sicca ATCC 29256] # 1 66 1 66 66 96 100.0 6e-19 MNEQTKQAAQTIGRLKRKASDEERLQGWRETCAKQGLSGEFILTAKLNGAAYTEEEARMV AELFGK >gi|289656352|gb|ADEA01000015.1| GENE 121 130115 - 130852 396 245 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 1 236 11 259 329 157 38 5e-37 MIILDNVSKHYQTRDKTRFAAVEPTSLEIQDGEIFGLMGYSGAGKSTLLRLINLLERPDS GKVNVCGQELTALDAAALRQARQNIGMVFQQFNLLSNRTVADNVAFPLEIAGWSSEKIKE RVKECLEIVGLTERADHYPAQLSGGQKQRVGIARALAPKPQVILADEPTSALDPATTRSV LECLEDINKRFNVTIVIVTHEMSVIRRLCDRAALLDKGKVVEIVEVRGNQIHAQSEIGRE LIRED >gi|289656352|gb|ADEA01000015.1| GENE 122 130854 - 131540 1316 228 aa, chain + ## HITS:1 COG:NMB1947 KEGG:ns NR:ns ## COG: NMB1947 COG2011 # Protein_GI_number: 15677777 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, permease component # Organism: Neisseria meningitidis MC58 # 1 228 1 228 228 311 96.0 7e-85 MADLTFEQAVSTIVGMKDEIVRALGETFVMVGLSTTIAVIFGTLLGVLLFVTSSRQLHYN KPVNFLLDNLVNLMRAFPFVILMIAMIPATRAIVGSTIGPIAASLVLSVSGLFYFARLVE QNLREVPKGVIEAATAMGASPLAIVRKVLLNEARAGMVSSITVLAIGLLSYSAAAGMIGG GGLGDLAIRYGYYRYQTEVIIFIVALLVLLVILIQSTGNALARKLDKR >gi|289656352|gb|ADEA01000015.1| GENE 123 131618 - 132073 459 151 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298369224|ref|ZP_06980542.1| ## NR: gi|298369224|ref|ZP_06980542.1| ATPase [Neisseria sp. oral taxon 014 str. F0314] # 1 151 6 156 156 271 100.0 8e-72 MKYAGPILIANYLINIGGTLWSYIEPEEMPDMLYIGLSLGMLIAQLASLYKLKNSAAGIK AHNGKMLLGDMCFFILLCLAVMAVFILIDIIAAFILTDATGVNEDAFVLTADLVTSVSSL MIEAGLIWLCYRSAKGLYLTIKNRPVSHKWI >gi|289656352|gb|ADEA01000015.1| GENE 124 132140 - 133057 1534 305 aa, chain + ## HITS:1 COG:NMA0506 KEGG:ns NR:ns ## COG: NMA0506 COG1464 # Protein_GI_number: 15793505 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Neisseria meningitidis Z2491 # 5 290 3 286 287 451 88.0 1e-127 MQTTTFFKTLSAAALAVVLAACGGQKDSAPAAASAASPAADNGAAKKEIVFGTTVGDFGD MVKDQIQPALEKKGYTVKLVEFTDYVRPNLALAEGELDINIFQHKPYLDDFKKEHKLDIT EAFQVPTAPLGLYPGKLKSLDEVKDGSSVSAPNDPSNFARALVMLNELGWVKLKDGVNPL TASKADIAENPKNIKIVELEAAQLPRSRADVDFAVVNGNYAMSSGMKLTEALFQEPSFAY VNWAAVKTADKDSQWLKDVTEAYNSDEFKTYARKRFEGYKYPAAWGENAAAGAKAEAAST ASAAK >gi|289656352|gb|ADEA01000015.1| GENE 125 133137 - 133616 539 159 aa, chain - ## HITS:1 COG:no KEGG:VCM66_A0409 NR:ns ## KEGG: VCM66_A0409 # Name: not_defined # Def: hypothetical protein # Organism: V.cholerae_M66-2 # Pathway: not_defined # 46 158 28 140 141 158 63.0 6e-38 MKRWVWIIVAALAVFGYRQFQQHEAGQGRSVIERPSEKRSADVKSGQGSAEQVLRQAFEA GRGDIQIEGRGVVVKTLPDDEKGSRHQRFILKLSGGQTLLVAHNIDLADKIKGLKKGDTV GFYGEYEWSKQGGVIHWTHRDPAGRHADGWLKHNGRIYW >gi|289656352|gb|ADEA01000015.1| GENE 126 133705 - 134493 1124 262 aa, chain - ## HITS:1 COG:no KEGG:NGK_2004 NR:ns ## KEGG: NGK_2004 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 1 262 1 256 256 223 50.0 7e-57 METNTPKQEQPEESFDWESRLEKLRQTRQINAPYTHAPLIKESAREKPVETETYKLDAGT RDKVLMEYLEQWQREHNAELEETEQVETDTMVLLQENWLSAQSSLQMKASDKQIDSTRTV WLNPKHQKVEFAAPEQSDRPSSGGQQEGAAAESGVSDGLAAEEGPRIAVNINVLNPQAVN RKEVFCLSEKDLTERLIERMRPHVADAVNGMIRVAVQKQMALFTYQLQQTLNEQAPQLVE EVLEYNIKKVLTDLKYEMKYKR >gi|289656352|gb|ADEA01000015.1| GENE 127 134589 - 134840 401 83 aa, chain + ## HITS:1 COG:no KEGG:NMB1611 NR:ns ## KEGG: NMB1611 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis # Pathway: not_defined # 1 83 1 83 83 124 87.0 1e-27 MSSIEQRLEYLEEANDVLRMQNHVLATAIKGLIRALPPETAQDAVESIQLAFEDALDELN YEDSPHIDLFHDVTYAFFREKER >gi|289656352|gb|ADEA01000015.1| GENE 128 134953 - 135768 1302 271 aa, chain + ## HITS:1 COG:NMB1612 KEGG:ns NR:ns ## COG: NMB1612 COG0834 # Protein_GI_number: 15677462 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Neisseria meningitidis MC58 # 1 266 1 268 268 407 84.0 1e-114 MNMKKWIIAAVACSALALGACGGQNKNSSAANPYKVYRVGMNAEFAPFESQTSEGNVEGF DVDLMNAMAKAGNFKVEFKHQPWESLFPSLGNGDIDIVISGVTITDERKQSMDFSDPYFE ITQVVLVPKGKKVASSDDLKNMAKVGVVTGQTGDFSVSKLLGSDNPKISRFETVPLIIKE LENGGLDSVVSDSAVIANYVKNNPTKGLDFITLPDFSVENYGIAVRKGDEAAVKMLNDAL KKVRESGEYDKIYAKYFAKEEAKAGKAEKTK >gi|289656352|gb|ADEA01000015.1| GENE 129 135845 - 137140 1890 431 aa, chain - ## HITS:1 COG:NMA1943 KEGG:ns NR:ns ## COG: NMA1943 COG0172 # Protein_GI_number: 15794826 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Seryl-tRNA synthetase # Organism: Neisseria meningitidis Z2491 # 1 429 1 429 431 812 95.0 0 MLDIQQLRSHTAAVAERLAQRGYEFDTARFNALEEQRKAVQVKTEELQASRNSISKQIGA LKGQGKHEEAQAAMDQVAQIKTDLEQAAADLDAVQKELDAWLLSIPNLPHESVPAGKDET ENVEVRKVGTPREFDFEIKDHVDLGEPLGLDFEGGAKLSGARFTVMKGQIARLHRALAQF MLDTHTLKHGYTEHYTPYIVDDTTLQGTGQLPKFAEDLFHVTRGGDESKKTQYLIPTAEV TLTNTVADSIVAGSDLPLKLTAHSPCFRSEAGAYGKDVRGLIRQHQFDKVEMVQIVHPEK SYEALEEMVGHAENILKALELPYRVITLCTGDMGFGATKTYDLEVWVPAQNTYREISSCS NCEDFQARRMKARFKDENGKNRLVHTLNGSGLAVGRTLVAVLENHQNADGSINIPAALQP YMGGVAKLEAN >gi|289656352|gb|ADEA01000015.1| GENE 130 137303 - 139687 3426 794 aa, chain - ## HITS:1 COG:NMB0618 KEGG:ns NR:ns ## COG: NMB0618 COG0574 # Protein_GI_number: 15676521 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate synthase/pyruvate phosphate dikinase # Organism: Neisseria meningitidis MC58 # 1 794 1 794 794 1534 94.0 0 MADNYVIWFENLRMTDVESVGGKNASLGEMISQLTEKGVRVPGGFATTAEAYRAFLAHEG LSERISAALAELDIEDVAELARVGKEIRQWILNTPFPEQLNAEIEEAWNKMVVDAGGADI SVAVRSSATAEDLPDASFAGQQETFLNINGLDNVKEAMHHVFASLYNDRAISYRVHKGFA HDVVALSAGVQRMVRSDSGASGVMFTLDTESGYDQVVFVTSSYGLGENVVQGAVNPDEFY VFKPTLKAGKPAILRKTMGSKQIKMIFTDKAEAGKSVMNVDVPEEDRNRFSISDEEITEL AHYALTIEKHYGRPMDIEWGRDGIDGKLYILQARPETVKSQEDGSRSLRRYAISGEKNVL CQGRAIGQRVGQGRIRLVKDASQMNTVEAGDVLVTDMTDPDWEPVMKRASAIVTNRGGRT CHAAIIARELGIPAVVGCGDATGLLSDGQDVTVSCAEGDTGLIYAGLLDVQITDVALDNM PKAPVKVMMNVGNPELAFSFSGLPSEGIGLARMEFIINRQIGIHPKALLEFDGLDDELKA EITRRIAGYASPVDFYVDKIAEGVATLAASVYPRKTIVRLSDFKSNEYANLVGGNLYEPH EENPMLGFRGAARYVADSFKDCFALECKALKRVRDEMGLTNVEIMIPFVRTLGEAEAVVK ALKENGLERGKNGLRLIMMCELPSNAVLAEQFLQYFDGFSIGSNDMTQLTLGLDRDSGLV SESFDERNPAVKVMLHLAISACRKQNKYVGICGQGPSDHPDFAKWLVEEGIESVSLNPDT VIETWLYLAEELGK >gi|289656352|gb|ADEA01000015.1| GENE 131 140104 - 140925 1178 273 aa, chain + ## HITS:1 COG:NMB0619 KEGG:ns NR:ns ## COG: NMB0619 COG1806 # Protein_GI_number: 15676522 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 1 273 1 273 273 470 83.0 1e-132 MTVTRNIFYISDRTGLTAENIGEALLNQFSNIEFKRATYPFIDTAEKARSVVDIVNRAAE SQGRRPIAFVSVVNNEIRQIIKEANAFQINFFDTFLGELEKELDVEATTAHHGHHGIGNT QRYDARMEAVNFSLNHDDGVSDKNLKEADVILMGVSRSGKTPTCLYLALQYGIRAANYPL IPDDLESSDLPRMVKPYKDKLFGLTIQPERLQAIRQERRPNSTYSKIDTCRSEISDAQSM FKRHGIPFTNTTDKSVEELAVHILQACKLKRRF >gi|289656352|gb|ADEA01000015.1| GENE 132 141027 - 141422 430 131 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298369233|ref|ZP_06980551.1| ## NR: gi|298369233|ref|ZP_06980551.1| hypothetical protein HMPREF9016_00903 [Neisseria sp. oral taxon 014 str. F0314] # 18 131 18 131 131 107 100.0 3e-22 MKKLIAAALLLATSATLMAAPRLNDTMREKQYRHDEALREKQDRYDEALRRKSEQYRGDD PRRYDDMLDEKSDRYYDALKERQRKYDEALERKQREYNEARDRRIDEARRARERRIDDAR RRSDERRYRRF >gi|289656352|gb|ADEA01000015.1| GENE 133 141897 - 143597 2631 566 aa, chain - ## HITS:1 COG:NMB0842 KEGG:ns NR:ns ## COG: NMB0842 COG0608 # Protein_GI_number: 15676738 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-specific exonuclease # Organism: Neisseria meningitidis MC58 # 1 566 1 566 566 1098 94.0 0 MPVKIQTRPVNQNVLDDLLTAGADPLIARLCASRDVQSPAELDDKLAGLLPYQSLTNCEA AARRLADAIERKEKILIVADYDADGATACSVGMSGLAAMGAAVDFLVPNRFEHGYGLTPE LAEIAAAQGVDLLITVDNGIASIAGVARAQELGLDVIVTDHHLPAETVPDCIIVNPNQKG CGFPSKSLAGVGVIFYVLMALRAELRRRDYFSDELKEPNLGELLDLVALGTVADVVPLDH NNRILVSQGLKRMRSGKMRPGIRALFEVARRDWRKAQPFDMGFALGPRINAAGRLDDMSV GITCLLARDDAEAQALAAQLNDLNIERREIEQSMLQDALNAFPETLPSGQTTLVAYRDDF HQGVVGIVASRLKDRFYRPTIVFAPADNGEVRGSGRSIPNLHLRDALDLVSKRHPDLILK FGGHAMAAGLSILEHNIPAFQTAFEEAVREMVCEDDLSQTFITDGSLKACDITLEQAQNL ARHVWGQGFAPPSFTDEFHVIRQQPLGAEGKHKKVWLQKDGYEFEAMFWRCSEDIPEYIR TVYRPVANEWRNQMELQLYIDYWEAA >gi|289656352|gb|ADEA01000015.1| GENE 134 143721 - 144593 533 290 aa, chain - ## HITS:1 COG:no KEGG:XCV4417 NR:ns ## KEGG: XCV4417 # Name: not_defined # Def: hypothetical protein # Organism: X.campestris_vesicatoria # Pathway: not_defined # 3 178 2 159 310 164 54.0 4e-39 MANEKIEVGYRHIGTFAKVEYHHKFLLYTDKTGQRYTISGWTGEETSPQLPLGKIHIETG LPNHMGLPYDANNPDNFDNRKTAWYKNADKEPISPQKQYRELIAEAPDLSVKWAEMVRNA QSKDNIYPYDYLRQNSNTLADTLLREAGFPEPEKDGIFRHLAPGSGNRLDRNLVPQHPDD AGISDLKDLSYLEEEKFKENPQYAMQTQSEPVENPKPQSKYEETMAMLQGLLNDTDGSYA KKLLADNPDKVASFNERVQQALEEERQQQLAVQEEQNIQQEQQRGFSRSI >gi|289656352|gb|ADEA01000015.1| GENE 135 144610 - 144915 439 101 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298369236|ref|ZP_06980554.1| ## NR: gi|298369236|ref|ZP_06980554.1| hypothetical protein HMPREF9016_00906 [Neisseria sp. oral taxon 014 str. F0314] # 1 101 43 143 143 186 100.0 4e-46 MQPSSPMLNEIFASEKYIRPGQSKDVSYIVSKYLPIGSSKKEVIDKLNEMNQHYSDKGHI IYAGYGKQIHPMIPNPEVMIELKFNASGYLENIDSQFYYAQ >gi|289656352|gb|ADEA01000015.1| GENE 136 145093 - 145404 198 103 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298369237|ref|ZP_06980555.1| ## NR: gi|298369237|ref|ZP_06980555.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 103 73 175 175 178 100.0 8e-44 MSNLNLMLNEVFKIRITDISSQRADVSHIVSKYICSGTSRHEINNIISDKFDILENSNNK LLIHYKKGEGNLGNRRDLYIGLFFDRNGNLLGNTSYLDKSNNL >gi|289656352|gb|ADEA01000015.1| GENE 137 145648 - 146181 891 177 aa, chain - ## HITS:1 COG:NMA1049 KEGG:ns NR:ns ## COG: NMA1049 COG3028 # Protein_GI_number: 15794000 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 168 22 189 191 272 87.0 3e-73 MFEQEEEWVSKTRMKKQMNDLQDLGMELTKLSPDTLKKIGLDEELLEAVLAYKKITSNGA LKRQGQFIGRLMRDTDPAPIEAFLAKLRGDNAAHNAFLQRIEQARDRLLADDGAVTQFMA DFPHADAGKLRTLIRNTKKEQEQNKPPKNFRALFQEIKAVMEGSGAEGADGVQDWAE >gi|289656352|gb|ADEA01000015.1| GENE 138 146315 - 147646 1794 443 aa, chain + ## HITS:1 COG:NMB0839 KEGG:ns NR:ns ## COG: NMB0839 COG0312 # Protein_GI_number: 15676735 # Func_class: R General function prediction only # Function: Predicted Zn-dependent proteases and their inactivated homologs # Organism: Neisseria meningitidis MC58 # 1 443 1 443 443 719 82.0 0 MLFNHTPDELTDLCSRTLALAKKYGATAAEADFSESLGQSVSVRLGEIEQIEFQQDKSLD ITVYAGRRKGRASTADFSDKALVDTVRAAIDIARYTAEDDCAGLADADLMADKPIDLDRY HEWDLSAEEAAALAKQCEQAALDSDERIENSEGADVQTGHYQYVYGNSHGFMAHQQGTRH GISCSVVAADEQGMERDYWYDSACCHQDLETPEQIGRTAALRTVRRLDSRSIPTGTYPVL FDTTMSGSLIGHLAGALSGGALYRQSSFLMDSIGKKILPDFVNLREEPHIPRAFGSCWFD SEGVATHPRFVIKNGIVEGYFLSSYSARKLGMQTTGNAGGPHNLYLAPTHAAQADLLKEM GTGLLVTELMGQGVNTITGDYSRGAAGFWVENGVIAHSVHEITIAGRLQDMYLNIAGIAD DALRRSPNKIGSILIAEMTVAGA >gi|289656352|gb|ADEA01000015.1| GENE 139 147699 - 148571 1070 290 aa, chain + ## HITS:1 COG:NMA1339 KEGG:ns NR:ns ## COG: NMA1339 COG1562 # Protein_GI_number: 15794263 # Func_class: I Lipid transport and metabolism # Function: Phytoene/squalene synthetase # Organism: Neisseria meningitidis Z2491 # 12 290 4 282 290 441 76.0 1e-124 MQPNPGHAVQPLEYCRLKAAESKSSFLSGFRFLPQAQREAMTVLYVFCRELDDVADDSSN PAVAQAALNWWRADLAKAFTEQMPEHPVNQALKTVLHSFALPHGEFSELIDGMQMDLDQA RYNSFDDLKLYCRRAAGVVGCLIARILGFTQPQTLEYADKMGLALQLTNIIRDVGEDARK GRIYLPVEDMQRFGVPASVVMRSAPTPEFAALMAFQIGRARETYRQAVSLLPAADKKSQK VGLIMAAIYYALLNEIERDGAENVLTYKIAIPSPRKKRIALKTWLFGFRP >gi|289656352|gb|ADEA01000015.1| GENE 140 148568 - 149890 1928 440 aa, chain + ## HITS:1 COG:NMA1338 KEGG:ns NR:ns ## COG: NMA1338 COG2907 # Protein_GI_number: 15794262 # Func_class: R General function prediction only # Function: Predicted NAD/FAD-binding protein # Organism: Neisseria meningitidis Z2491 # 6 432 8 433 437 508 61.0 1e-144 MNDTQRPKIAVIGAGWAGLSAAVQLVGRADVTLFEAGKQAGGRARSLENSNDSFSFLDNG QHIMIGAYRGVLTLMERIGVRAEEALVRRPLQWHIHEGLQFQTASLPSPWHIAAGILRAD NILLAHKIQLLRDMAALQRHHMRKRPDVPVAKWLRDRRTSRKLLAEFWQPLVWSALNTPL EDAGLNTLCNVLHDGIWADKTGSDYLLPKRDLGGIVAAPALDYLRKHGASVRLETRVPPL GNLPDGRVDVNSEAFDAAILATAPYHTAMLLPSSTPEYIQTAYDHLRYHSVTTVYLRYAK DVKLPAVLTGLADGTAQWLVNRGALGLPANEIAAVVSVSDRLHLKNSEFAEKIHADVLRV CPDIGDPVAGRIITEKRATAASLAGRTLPDFAWLHHRNIYPAGDYLHPRYPCTLEAAVQS GAVTADLCLNELRASPLNLF >gi|289656352|gb|ADEA01000015.1| GENE 141 149994 - 150536 643 180 aa, chain + ## HITS:1 COG:NMA0915 KEGG:ns NR:ns ## COG: NMA0915 COG1714 # Protein_GI_number: 15793880 # Func_class: S Function unknown # Function: Predicted membrane protein/domain # Organism: Neisseria meningitidis Z2491 # 3 169 2 168 170 216 65.0 1e-56 MTTLPSAPVKRRLAALMYELLLVGSVTAAAAIAAGIAAIRLNPVSHRLASLTVCLLMLAC WWYYFKINWHKKGRTLPMQVWKIGLCNRQGVRPPLHQLRLRFIWACVFIVFVPLLAYSGL RYWGQIPPKGAFGAALIWLILPWGFAFFNPDRQFLYDFLAGTRLVDLKAAEEEKKKAKRV >gi|289656352|gb|ADEA01000015.1| GENE 142 150882 - 151631 918 249 aa, chain - ## HITS:1 COG:NMA0444 KEGG:ns NR:ns ## COG: NMA0444 COG0491 # Protein_GI_number: 15793448 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Neisseria meningitidis Z2491 # 1 249 1 249 250 417 78.0 1e-117 MNITPIQALNDNYIWMIQDGNHAACVDPSDATPVLKFLVRNRLMLAQMWITHPHHDHIGG VKALKNSFMESLVYGEADIEAATHTVKVGTQFPFGDGLVTVWATPGHTGRHVSYLLENSD GLHVFCGDTLFSAGCGRVFTGTIEELYDSFQRFNQLPEETLFYPAHEYTAANLRFAGFIE PENPDIQAALRAAEHTPTLPVTLAHERRINPFLRVDFPKVRERVEELAGRGLNSGLEVFA ALRELKNRF >gi|289656352|gb|ADEA01000015.1| GENE 143 151656 - 152762 1236 368 aa, chain - ## HITS:1 COG:no KEGG:Arad_12046 NR:ns ## KEGG: Arad_12046 # Name: not_defined # Def: hypothetical protein # Organism: A.radiobacter # Pathway: not_defined # 27 355 4 321 330 66 24.0 2e-09 MTRQAFILSDCEFSECGEKPYALLTANPTKEHHYIAQTEQRQHAHNPQVSPQNQNVYKLP LSMFREPAAARRSRSGDKVRGGHESRGAAASVNIIGNLAAKNLYTLTFVENTANQYNLES WFNRHESGYEEACNHLRTLPEGRLKTGETDTVKVPEALWRILRLKFLGILRNPHNHKNLF AHRLHEAVRARLPEVGFEFVRLISKRDPSRIEAIMQNYRFSFLGYVDWLAGLYGMLSEGV AQPSLFERLFCTIFAEPDAVKIELFRYAENEGLCLFGDSSFCLQTSPKLISVGVNISHDM FAVVHLQTDRWLAFKNTFHHDAPKLEGRVRIIDGDQTQRLMFNRLTISQAHEAVFGRSPN AEDYLEAV >gi|289656352|gb|ADEA01000015.1| GENE 144 153118 - 153903 518 261 aa, chain - ## HITS:1 COG:NMA1036 KEGG:ns NR:ns ## COG: NMA1036 COG3440 # Protein_GI_number: 15793992 # Func_class: V Defense mechanisms # Function: Predicted restriction endonuclease # Organism: Neisseria meningitidis Z2491 # 141 258 241 365 372 84 40.0 2e-16 MAKTKYSARINGEHIDGTIEIIKRIVLHLHDMGKTQFKVKDVDEQIEELKNQWQITPDYN DDTRASLYVLSVNSNSRKHYHESMHQDFLWWKKGGIFELYKPTNFQINSTQSLEQDLGKL KEQLASEIEPEKRTEIETLIKARQGQGRFRQKLLELYSSCPLTDLDVRSLLIASHIKPWS KCNNEERLDPFNGLMLAPNIDALFDSGLITFDADGTIKISPKIDLENQKRLGISPDMKLK IEPESQKYFEYHRNHVFQKEE >gi|289656352|gb|ADEA01000015.1| GENE 145 154202 - 158098 4950 1298 aa, chain - ## HITS:1 COG:NMA0445_1 KEGG:ns NR:ns ## COG: NMA0445_1 COG0046 # Protein_GI_number: 15793449 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain # Organism: Neisseria meningitidis Z2491 # 1 973 1 995 1001 1814 90.0 0 MSVVLPLRGVTALSDFRVEKLLQKAAALGLPEVKLKSEFWYFVGSEKAPDAATVEKLQAL LAAQSVEQTPEAREGLHLFLVTPRLGTISPWASKATNIAENCGLEGIERIERGMAVWLEG RLNDEQKQQWAALLHDRMTESVLPDFQTASKLFHHLESETFSTVDVLGGGKEALVKANTE MGLALSADEIDYLVENYQALQRNPSDVELMMFAQANSEHCRHKIFNADFILNGEKQPKSL FGMIRDTHNAHPEGTVVAYKDNSSVIEGAKIERFYPNAAENQGYRFHEEDTHIIMKVETH NHPTAIAPFAGAATGAGGEIRDEGATGKGSRPKAGLTGFTVSNLNIPDLKQPWEQDYGKP EHISSPLDIMIEGPIGGAAFNNEFGRPNLLGYFRTFEEKFDDQVRGYHKPIMIAGGLGSI QAQQTHKEEIPEGALLIQLGGPGMLIGLGGGAASSMNTGTNDASLDFNSVQRGNPEIERR AQEVIDRCWQLGDQNPIISIHDVGAGGLSNAFPELVNDAGRGAVFKLREVPLEEHGLNPL QIWCNESQERYVLSILEKDLDTFRAICERERCPFAVVGTATDDGHLKVRDDLFSNNPVDL PLNVLLGKPPKTTRSDKTVRSSEKAFNAQNIDITEAAYRVLRLPTVAAKNFLITIGDRSV GGMTHRDQMVGKYQTPVADCAVTMMGFNTYRGEAMSMGEKPTVALFDAPASGRMCVGEAI TNIAAVNIGDIGNIKLSANWMAACGNEGEDEKLYRTVEAVSQACQALDLSIPVGKDSLSM KTVWQDGEEKKSVVSPLSLIISAFAPVKDVRKTVTPELKNVEDSVLLFVDLGFGKARMGG SAFGQVYNNMSGDAPDLDDTDRLKAFYSVIQQLVAEDKLLAYHDRSDGGLFATLAEMAFA GRCGLNVDLTSLVVNQADVNEASIRALFNEELGAVIQIAKQDVAAAEALFKAAALPLHTV ATIGSDKKIVIRNQAGIVLEQNRADLQRAWQETSHAIQRLRDNPACADSEFALIDDNERS ALFADVKFDVNEDIAAPSINSGAKPKIAILREQGVNGQIEMAAAFTRAGFDAYDVHMSDL MAGRVHLADFKMLAACGGFSYGDVLGAGEGWAKSILFHPALRDQFAAFFADPDTLTLGVC NGCQMVSNLAEIIPGTVGWPKFKRNLSEQFEARLSMVHVPKSASLILNEMQGSSLPVVVS HGEGRADFALHGGKISDGLGIALQYVDGQNQVTQTYPLNPNGSPQGIAGVTNADGRVTIM MPHPERVYRAAQMSWKPEDWTELSGWYRLFAGARKALG >gi|289656352|gb|ADEA01000015.1| GENE 146 158441 - 158779 657 112 aa, chain + ## HITS:1 COG:NMB1995 KEGG:ns NR:ns ## COG: NMB1995 COG0347 # Protein_GI_number: 15677823 # Func_class: E Amino acid transport and metabolism # Function: Nitrogen regulatory protein PII # Organism: Neisseria meningitidis MC58 # 1 112 1 112 112 177 92.0 5e-45 MKKIEAIIKPFKLDDVREALTEIGITGMTVSEVKGFGRQKGHTEIYRGAEYAVDFLPKVK VELVLADEDVERAIDVIIETARSGKIGDGKIFVLPVEEAIRIRTGERSEAAV >gi|289656352|gb|ADEA01000015.1| GENE 147 159249 - 163082 5360 1277 aa, chain + ## HITS:1 COG:NMA1206_1 KEGG:ns NR:ns ## COG: NMA1206_1 COG0277 # Protein_GI_number: 15794150 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Neisseria meningitidis Z2491 # 1 805 1 805 805 1573 96.0 0 MTTTTAPQRIREIPYNYTSYTDREIVIRLLGDEAWQILQDLRGQRRTGRSARMLFEVLGD IWVVVRNPYLVDDLLEHPKRRAALVREMRHRLNEIRKRRDDNPQVDVLVAAAEKAVERFD GSFDETRQKRRQILERLSKITKPHNIMFDGLARVTHVTDATDWRVEYPFVVVNPDTEAEV APLVRALIELDLVIIPRGGGTGYTGGAVPLDANSVVINTEKLDKHRGVEFVELAGLDGKH PIIHCGAGVVTRRVEETAHQAGLVFAVDPTSADASCVGGNVAMNAGGKKAVLWGTALDNL AYWQMVNPQGKWLRIERVRHNFGKIHDEETAVFDVHTLDSDGLNVVKTERLEIPGHKFRK VGLGKDVTDKFLSGLPGVQKEGTDGIITSVAFVLHKMPKYTRTVCMEFFGTVATATPSIV EIRDFLLAHDSVRLAGLEHLDWRYVRAVGYATKAAGKGRPKMVLLADVVSDDEAAVEAAA EHICELARARDGEGFIAVSPEARKTFWLDRSRTAAIAKHTNAFKINEDVVIPLERLGEYS DGIERINIELSIQNKLTLCAALEQYLSGKLPIDKMGTDLPTAELLGERGKHALAHVSAVK ARWDWLLANLDTPLADYKSRYGAAVHAAPEAKDGESCFTAFRDFRLRVSVKEDVMKPLAE IFSGKTDTKIIEGLGKIHAKTVRGRVFVALHMHAGDGNVHTNIPVNSDDAQMLQTAYRSV ERIMKLARSLGGVISGEHGIGITKLEFLTDEDLQPFWDYKNQVDPKHTFNRHKLMKGSDL RNAYTPSFELLGAESLIMEKSDLGTIADSVKDCLRCGKCKPVCSTHVPRANLLYSPRNKI LGVGLLTEAFLYEEQTRRGVSIKHFEELMDIGDHCTVCHRCVKPCPVNIDFGDVTVAIRN YLADSGHKRFAPAASMGMAFLNATGPKTIKALRAAMIQTGFPAQNFAYKIGKILPVGTKK QKAEPKATVGTASVKEQIIHFINRPLPKSVPAKTPRSMLGIEDDKSIPIIRNPDAPEDAE AVFYFPGCGSERLFSQIGLAVQAMLWHVGVQTVLPPGYMCCGYPQDAGGNKAKAEQMSTN NRVAFHRMANTLNYLDIKTVVVSCGTCYDQLEKYRFEEIFPGCRIIDIHEYLLEKGVKLN GVKGQQYLYHDPCHTPIKTMNATQMASSLMGQKVVLSDRCCGESGMFAVKRPDIATQVKF RKQEEIEKNLKELPQGEPVKMLTSCPACLQGLSRYTDDNDMPADYIVIEMAKHILGENWL DEFVKKANNGGVEKVLL >gi|289656352|gb|ADEA01000015.1| GENE 148 163178 - 164212 1604 344 aa, chain - ## HITS:1 COG:NMB0682 KEGG:ns NR:ns ## COG: NMB0682 COG0418 # Protein_GI_number: 15676580 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase # Organism: Neisseria meningitidis MC58 # 1 344 1 344 344 647 96.0 0 MQTLTIIRPDDMHLHLRDGDALQAVAPYTARQMGRAVIMPNLKPPVVSVADALAYKARIM AALPEGSAFTPLMTLYLTDQATPELVREAKAAGIVAFKLYPAGATTNSDSGVTDLFKLIP VLEEMAKQGILFLVHGEVTDPEIDIFDREAAFIERVMKPVLARVPDLKVVFEHITTAEAA RLVLDAGDNVAASVTPQHLLLNRNDLLVGGVRPHHFCLPVLKRETHRRALVAAVTGEKAH KFFLGTDSAPHAKSAKENACGCAGMFSAMTAIELYAEVFEKAGALDKLEAFSSKNGTRFY GIPENTDTITLVKQSQTVPASVPYGDGELVPMRAGGEIGWTVRY >gi|289656352|gb|ADEA01000015.1| GENE 149 164295 - 164885 601 196 aa, chain - ## HITS:1 COG:no KEGG:NMA0883 NR:ns ## KEGG: NMA0883 # Name: not_defined # Def: putative lipoprotein # Organism: N.meningitidis_A # Pathway: not_defined # 28 193 30 195 197 135 42.0 1e-30 MRIAASAALFGILLAGCRVDTVPPEQLQRQGREVVALFEQSCAANGGDGAKVTAWAESRQ AQKLAADEVNKLPPGMMESGVQAVWRIQKDGADYYLGLSPDSCSVKTAKADENTVRQQFE ELVKRGAQGANVELRADNAAQSPFPIRQLSYAWRPAGSGSETVLTANTSMSDRLPVQAAL MLTHQVYHSAPILEQD >gi|289656352|gb|ADEA01000015.1| GENE 150 164904 - 165125 342 73 aa, chain - ## HITS:1 COG:NMA0882 KEGG:ns NR:ns ## COG: NMA0882 COG0425 # Protein_GI_number: 15793851 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Neisseria meningitidis Z2491 # 2 73 3 74 74 121 80.0 3e-28 MTQILDVTGLRCPLPILRAKKALAQMEAGEVLTVLATDGGAPGDFEAFCRQTGHILLEST EADGVFTLVMRHK >gi|289656352|gb|ADEA01000015.1| GENE 151 165229 - 165834 1020 201 aa, chain + ## HITS:1 COG:no KEGG:NMCC_0636 NR:ns ## KEGG: NMCC_0636 # Name: cnp1 # Def: periplasmic protein # Organism: N.meningitidis_053442 # Pathway: not_defined # 1 201 1 203 203 249 60.0 3e-65 MRRISLLVLALAAAHAYAAGSTDKDSLVNTRYKESAAEKNAREFKEADIPLPAFPDPARG NWFDIYVDRNYGKSPKILTDSIEIAPDRSIRYVLNVKSAQGYDNLSAEGLFCADTSFSSG NSKRSSYKVFGYGDTVNKRWISPRNGTWKDIGSTMSRNDALHTVIYKTFCEDGVPSSVDA LRARLTQRAGRYSPSLTNRDK >gi|289656352|gb|ADEA01000015.1| GENE 152 165958 - 166377 491 139 aa, chain + ## HITS:1 COG:HI0293 KEGG:ns NR:ns ## COG: HI0293 COG0789 # Protein_GI_number: 16272248 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Haemophilus influenzae # 1 127 1 127 128 150 59.0 6e-37 MNIGEMAKRSGLSSKMIRDYEKIGLIRPAGRSESGYRRYTEQDLENLSFIRHARDVDFSL AQIKTLLQLKSNPQRTSAEVKRLTAEHIATLQAKIDRLQDMVNTLKNWHDCCCGDNRPDC PIIEQLSDTESCRTNTEAV >gi|289656352|gb|ADEA01000015.1| GENE 153 166438 - 167562 1577 374 aa, chain - ## HITS:1 COG:NMB2039 KEGG:ns NR:ns ## COG: NMB2039 COG3203 # Protein_GI_number: 15677862 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Neisseria meningitidis MC58 # 1 374 1 331 331 191 35.0 2e-48 MKRIIIALVTAGLPFAAAAEVTLYGQIKSSVSAGQVRIKGGSGTERSPTVTKINDNTSRI GFKGSEKIGDDLKAIWQVEQRTSVLNESNSTNWGSRDSFIGLEGGFGKIRAGHMNNLLNE MDTIDTWLYKSSALGLGAYVRTGSRTTSVRYDSPSFGGLKANLQYSPRDNQNPSDRNTRA EPSRDQYNVGLTYENSGFTANLAYNLRKNRYAETGGGERKDGHVVRLESYYDKDNLFLGL GAQYAKGNETANDYLAIFTSGFNTYNGSGITADTGKQEAVKVVDAAVTAGYNFGNWRPRI SYARGWPAKGVESGEKLVDKFDQIIVGGDYTFSKRTALRGQIGYLRVGGKTRLTAAERGK IEQSGASLGMVHKF >gi|289656352|gb|ADEA01000015.1| GENE 154 167652 - 167936 352 94 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298369255|ref|ZP_06980573.1| ## NR: gi|298369255|ref|ZP_06980573.1| non-ribosomal peptide synthetase [Neisseria sp. oral taxon 014 str. F0314] # 1 94 1 94 94 139 100.0 8e-32 MNREAQQTRELLQLEIKLIRLKIAAAHLKRQKSEEKRRNRQEPLFKLLDWGSELATGELL QKVAGLPVSRKYRFGTLAALLAVQVLQNGIKRDK >gi|289656352|gb|ADEA01000015.1| GENE 155 167929 - 168342 484 137 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298369256|ref|ZP_06980574.1| ## NR: gi|298369256|ref|ZP_06980574.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 137 1 137 137 220 100.0 2e-56 MGIRQNIEQTKFLFNQGVDLLLLRLQVLNLDLAEQAGNVLRAAVWLVLAAVLLFVGLISA LFGLNRILDDTAAVWVFFGIAAFCLLVIAAAGRAVIENWRGQNNRIAETLRDIQTDIAYL RGETGMEAADGKGEGDE >gi|289656352|gb|ADEA01000015.1| GENE 156 168415 - 168849 704 144 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298369257|ref|ZP_06980575.1| ## NR: gi|298369257|ref|ZP_06980575.1| hypothetical protein HMPREF9016_00927 [Neisseria sp. oral taxon 014 str. F0314] # 1 144 1 144 144 187 100.0 2e-46 MGKQDFEARRDALLQDIRSMMDDVQELYDNSVEEGTKEAKEAKAKLQVKLDAAKEKLGRF EEEAAKRVKYHAEQAKERFAEFGEEAGERFKRGKECFDRFEEEAAERVKHRARQADEAVR EKPYYAMGFAALAGLVVGVLLNRR >gi|289656352|gb|ADEA01000015.1| GENE 157 169050 - 169940 1723 296 aa, chain - ## HITS:1 COG:NMB0960 KEGG:ns NR:ns ## COG: NMB0960 COG0074 # Protein_GI_number: 15676853 # Func_class: C Energy production and conversion # Function: Succinyl-CoA synthetase, alpha subunit # Organism: Neisseria meningitidis MC58 # 1 296 1 296 296 521 98.0 1e-148 MSVLINKDTKVLVQGFTGKNGTFHSEQALAYGTKVVGGVTPGKGGQTHLNLPVFNTMKEA VKETGADASVIYVPAPFVLDSIVEAVDSGVGLVVVITEGVPTLDMLKAKRYLETNGNGTR LVGPNCPGVITPGECKIGIMPGHIHTPGRIGIISRSGTLTYEAVAQTTKLGLGQSTCIGI GGDPIPGMNQIDALKLFQEDPDTDAIIMIGEIGGTAEEEAAEYIQSNVTKPVVGYIAGVT APKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIAYTRSPAELGSTILEVLKAKGLA >gi|289656352|gb|ADEA01000015.1| GENE 158 169951 - 171117 1854 388 aa, chain - ## HITS:1 COG:NMA1153 KEGG:ns NR:ns ## COG: NMA1153 COG0045 # Protein_GI_number: 15794099 # Func_class: C Energy production and conversion # Function: Succinyl-CoA synthetase, beta subunit # Organism: Neisseria meningitidis Z2491 # 1 388 1 388 388 706 99.0 0 MNLHEYQAKELLAGYGLPVQGGILAHNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKAGGV KVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELYLGAVVDRSTR RITFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGLKDKQINEFVK LMTGAYKAFVENDFALFEVNPLAVRENGALACVDGKIGIDSNALYRLPKIAELRDKSQEN ERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDVGGGATKERVV EAFKLILEDKSVKGVLINIFGGIVRCDMIAEAIVAAVKEINVDVPVVVRLEGNNAELGAK ILNESGLKLTSADGLNDAAEKIVAAVNA >gi|289656352|gb|ADEA01000015.1| GENE 159 171215 - 171502 345 95 aa, chain - ## HITS:1 COG:no KEGG:NGK_0886 NR:ns ## KEGG: NGK_0886 # Name: not_defined # Def: membrane protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 1 95 1 95 95 160 95.0 1e-38 MNKEVIGILFIPMGIISMCMAALWQMYVMMTETYTLNRFKDKELVWRVALLFISFSLAVY LLCPNSRKKGIVFFILGGGGAIMYLLARMWLPFSK >gi|289656352|gb|ADEA01000015.1| GENE 160 171701 - 173134 822 477 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 1 476 1 457 458 321 39 2e-86 MSQYDVVVIGAGPGGYVAAIRAAQLGFKTACVDAGVNKAGDAPALGGTCLNVGCIPSKAL LQSSEHFHAAQHDFAEHGISVGDIKFDAAKMIARKDAIVTKLTGGVKFLFQKNKVTSLFG TASFAGKNGDAYQIEVDNKGEKTVVEAKHVIVATGSVPRPLPQVAIDNVNVLDNEGALNL TEVPAKLGVIGSGVIGLEMGSVWNRVGSQVTILEAMPTFLAAADQQIAKEAFKYFTKEQG LNIELGVKIGDIKSEAKGVSVAYQTAAGEAKTEVFDKLIVAIGRIPNTKGLNAEAVGLEK DERGFIKVDGECRTNLPNVWAIGDVVRGPMLAHKASDEGVAVAERIAGQKPHIDFNNVPF VIYTDPEIAWVGKTEEQLKAEGVEYKKGTSGFGANGRALAMGKAKGTVKVLADAKTDRIL GVHMIGPVVSELVTEGVTALEFFASSEDIARIIHAHPTLSEVVHEAALAADKRALHG >gi|289656352|gb|ADEA01000015.1| GENE 161 173419 - 173688 448 89 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298369262|ref|ZP_06980580.1| ## NR: gi|298369262|ref|ZP_06980580.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 89 1 89 89 178 100.0 8e-44 MKPISLFPLLAVVSLLGACAAFEGKEYSVNAYDARGRMLNKRFEMDSNKAGIPVARSVLC KRYPHATVRVYNNFTGQEVREYSPHSCHR >gi|289656352|gb|ADEA01000015.1| GENE 162 173882 - 175063 1667 393 aa, chain - ## HITS:1 COG:NMB0956 KEGG:ns NR:ns ## COG: NMB0956 COG0508 # Protein_GI_number: 15676849 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes # Organism: Neisseria meningitidis MC58 # 1 393 1 393 393 581 89.0 1e-165 MIIDVKVPMLSESVSEGTLLEWKKKVGEAVARDEILIDIETDKVVLEVPSPQAGVLVEII AQNGETVAAEQVLARIDTAATASASAEAPAAAPAPEAAPAAAQTNAAMPAAAKLAAETGV DVNTLQGSGRDGRVLKEDVQNAAAKPAAAPAAAPAPVPAGARPEQRVPMSRLRARVAERL LASQQENAILTTFNEVNMKPIMDLRAKYKEKFEKEHGTKLGFMSFFVKAAVAALKKYPVV NASVDGNDIVYHGYFDIGIAIGSPRGLIVPILRDADQMSIADIEQAIVDYAKKAKDGKIA LEDLTGGTFSITNGGTFGSMMSTPIINPPQSAILGMHATKERAVVENGQVVVRPMMYLAL SYDHRIIDGREAVLTLVAIKDALEDPARLLLDL >gi|289656352|gb|ADEA01000015.1| GENE 163 175176 - 177998 3742 940 aa, chain - ## HITS:1 COG:NMA1149 KEGG:ns NR:ns ## COG: NMA1149 COG0567 # Protein_GI_number: 15794095 # Func_class: C Energy production and conversion # Function: 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes # Organism: Neisseria meningitidis Z2491 # 1 940 1 942 942 1820 92.0 0 MMDDKLNFSYLFGSNAPYIEELYEQFLENPDSVDEKWKQYFSDLSKQPGAAAVDVAHGPI RESFANLTKHKSAAAGGIDETMMRKQVGVLRLISAYRIQGAGAAQLDPLKRMPPRNIEAL DPKFHGLSDADMAVQFSMGEGDFFGRDKMALSDIVNNLKQTYCGHLALEYIYIPNTEERR WLRNYFESVLSTPQYSAEQKRRILKEMTAAETLERYLHTKYVGQKRFGVEGGESVIAGLN YLIQNAGKDGVEEVIIGMAHRGRLNVLVNILGKKPGDLFAEFEGRAEIKLPSGDVKYHMG FSSDIATPNGPMHVSLAFNPSHLEIVNPVVEGSARAKQKRLGENGRDKVLPVLIHGDSAF VGLGVNQATFNLSKTRGYTTGGTVHIVINNQIGFTTSDTRDTRSTVHCTDVAKMVSAPVI HVNGDDPERVCFAIQAALDYRKKFNKDIVIDVVCYRKWGHNEGDDPTLTQPMMYKKVSQH PGARALYTEQLIAEGVVTQAEADGYIQAYRDALDKGEHVEQTTLSNFQRTQIDWSKYQGK DWREDVETGLPAADIERLAEKVTAVPEGFALHPTAKRVLEARKGMAAGSQPIDWGMAETL AYANLVTKGHGVRISGEDSGRGTFSHRHAVLHDQKREKWDDGTYVPLRNMGEGTGEFLVI DSILNEEAVMAYEYGFACSAPDKLTIWEAQFGDFANGAQVTIDQFLSSGETKWGRLCGLT TILPHGYDGQGPEHSSGRVERWLQLCSEHNMQVIMPSEASQMFHLLQRQVLGSYRKPLVI FMSKRLLRFKGAMSPLENFTEGSRFRPVIGDTAERGNNESVKRVILCAGQVYYDLEAGRA ERKLENDVAIVRVEQLYPFPYDEVRAELAKYPNAKSVVWAQEEPKNQGAFYQIRHRLEDV IGESQKLSYAGRPSSASPAVGYMSKHVAQLKQLVEDAMTL >gi|289656352|gb|ADEA01000015.1| GENE 164 178231 - 179517 1738 428 aa, chain - ## HITS:1 COG:NMA1148 KEGG:ns NR:ns ## COG: NMA1148 COG0372 # Protein_GI_number: 15794094 # Func_class: C Energy production and conversion # Function: Citrate synthase # Organism: Neisseria meningitidis Z2491 # 17 428 16 427 427 820 91.0 0 MSEKTKVTLTVSGCETELPVLDAALGHNVVDIRSLTKSTGLFAFDPGFMSTASCESKITY IDGDEGLLYYRGYPIEQLAEKSDYLEVCYLLIYGELPTPKQKAEFECTVRHHTMVHEQLT WFFRGFRRDAHPMAMMVGVVGALSAFYQDSLDITNPEHRKIAIYRLISKIPTIAAMCYRY SNGLPFNYPRNNLSYSENFMHMMFATPCEDYKPNPVLARALDRIFILHADHEQNASTSTV RLAGSSGANPFACISAGIACLWGASHGGANEAVLLMLDEIGDVSHVAEYMEGVKQRKYRL MGFGHRVYRNMDPRASIMRQTCYEVLKELNLEDNPKFKLAMELEKIALKDPFFVERKLYP NVDFYSGIVLSALGIPTSMFTVIFALARSVGWISHWHEMIGDPSLKIGRPRQLYTGAPRR DFVPPEQR >gi|289656352|gb|ADEA01000015.1| GENE 165 179608 - 179856 316 82 aa, chain - ## HITS:1 COG:NMA1147 KEGG:ns NR:ns ## COG: NMA1147 COG2938 # Protein_GI_number: 15794093 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 1 82 1 82 82 116 84.0 1e-26 MMVFDDIAKRKIRFQTRRGLLELDLIFGRFMEKEFEHLSDDELTCLVEILAFQDQELLSL INGSRTTDKAHLVPMLEKIRRS >gi|289656352|gb|ADEA01000015.1| GENE 166 179860 - 180567 965 235 aa, chain - ## HITS:1 COG:NMA1146 KEGG:ns NR:ns ## COG: NMA1146 COG0479 # Protein_GI_number: 15794092 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit # Organism: Neisseria meningitidis Z2491 # 1 235 1 235 235 484 99.0 1e-137 MEKMSFEIYRYNPDVDAKPYMQRYELELEPTDVKLLDALVRLKAQDDTLSFRRSCREGIC GSDGMNINGKNGLACLTDLRGLKQPVKIRPLPGLPVIRDLIVDMTQFFKQYHSIKPYVVN DNPIDADKERLQTQEERKELDGLYECILCACCSTACPSFWWNPDKFVGPSGLLNAYRFIA DSRDTITNERLDNLNDPYRLFRCHTIMNCVDVCPKHLNPTRAIGKIKEIMLKRAV >gi|289656352|gb|ADEA01000015.1| GENE 167 180696 - 182459 2203 587 aa, chain - ## HITS:1 COG:NMA1145 KEGG:ns NR:ns ## COG: NMA1145 COG1053 # Protein_GI_number: 15794091 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Neisseria meningitidis Z2491 # 1 587 1 587 587 1169 99.0 0 MGFPVRKFDAVIVGGGGAGLRAALQLSKSGLNCAVLSKVFPTRSHTVAAQGGISASLGNV QEDRWDWHMYDTVKGSDWLGDQDAIEFMCRAAPEAVIELEHMGMPFDRVESGKIYQRPFG GHTAEHGKRAVERACAVADRTGHAMLHTLYQQNVRANTQFFVEWTAQDLIRDENGDVVGV TAMEMETGEVYIFHAKAVMFATGGGGRIYASSTNAYMNTGDGLGICARAGIPLEDMEFWQ FHPTGVAGAGVLITEGVRGEGGILLNADGERFMERYAPTVKDLASRDVVSRAMAMEIYEG RGCGKNKDHVLLKIDHIGAEKIMEKLPGIREISIQFAGIDPIKDPIPVVPTTHYMMGGIP TNYHGEVVVPQGDEYEVPVKGLYAAGECACASVHGANRLGTNSLLDLVVFGKAAGDSMIK FIKEQSDWKPLPADAGELTRQRIERLDNQTGGENVDALRRELQRSVQLHAGVFRTDEILS KGVREIMAIAERVKRTEIKDKSKVWNTARIEALELDNLIEVAKATLVSAEARKESRGAHA SDDHPERDDENWMKHTLYHSDTNTLSYKPVHTKPLSVEYIKPAKRVY >gi|289656352|gb|ADEA01000015.1| GENE 168 182462 - 182803 413 113 aa, chain - ## HITS:1 COG:NMA1144 KEGG:ns NR:ns ## COG: NMA1144 COG2142 # Protein_GI_number: 15794090 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase, hydrophobic anchor subunit # Organism: Neisseria meningitidis Z2491 # 1 113 1 113 113 175 95.0 2e-44 MVERKLTGAHYGLRDWAMQRATAVIMLIYTVALLVILFTLPKEYSAWQAFFDQVWVKVFT QVSFIAVFLHAWVGIRDLWMDYIKPFGVRLFLQVATIVWLVGCLVYSVKVIWG >gi|289656352|gb|ADEA01000015.1| GENE 169 182797 - 183174 415 125 aa, chain - ## HITS:1 COG:NMA1143 KEGG:ns NR:ns ## COG: NMA1143 COG2009 # Protein_GI_number: 15794089 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, cytochrome b subunit # Organism: Neisseria meningitidis Z2491 # 1 125 1 125 125 178 84.0 2e-45 MPVKSRPVFLEIPNIRLPIPGIVSILHRISGVILFVMLPVLLYLLSGTLSRESAFETYRV IVSNPLAKLILIGVLWAYLHHLLAGVRFLFLDAHKGLELNTARNTAKLVFAAALVLTVVL GALLW >gi|289656352|gb|ADEA01000015.1| GENE 170 183553 - 183924 294 123 aa, chain + ## HITS:1 COG:AGc4850 KEGG:ns NR:ns ## COG: AGc4850 COG3339 # Protein_GI_number: 15889931 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 6 111 19 122 133 69 39.0 1e-12 MNTTPPEEYIPSFRRRQLDEPGFLRKLARFASRLGQPVVRQLYALYFLFKSPYTPKRAKM IILGALVYFFSPIDSIPDMLGPLGFSDDIAVITLVYSQVKAYLTEDIRERARQAAENLFG KKS >gi|289656352|gb|ADEA01000015.1| GENE 171 184003 - 184518 634 171 aa, chain - ## HITS:1 COG:no KEGG:NGO1251 NR:ns ## KEGG: NGO1251 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae # Pathway: not_defined # 1 171 31 192 192 236 67.0 2e-61 MKKYLPLLFITVALTGCESVYLPSLKEVPVRPINVKQGDTASKTPAGKTGQSNFHLASNH WSDVSKIRDEATRLSYQVSQGKMTKVQAAQYLNRFRIQLVGRNSVDDSMYEVYLRSAVDS QRGEISTSQSKLYIQNALRGWQQRWKSMTNKPSNPAFTNFLMEVMSMTPLQ >gi|289656352|gb|ADEA01000015.1| GENE 172 184776 - 185708 807 310 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 [Streptococcus pneumoniae SP6-BS73] # 1 306 1 304 308 315 54 1e-84 MKIANSITELIGNTPLVKLNNLTKGLKAEIAVKLEFFNPGSSVKDRIAESMIEAAEKAGK IHKDTVIVEATSGNTGIGLAMVCAARGYKLAITMPESMSKERKMLLRAFGAELILTPAAE GMGGAIAKAQALVDEHPDTYFMPRQFDNEANPQIHRETTAEEIWRDTDGKVDIFVAGVGT GGTITGVGEVLKQRNPAVQIVAVEPAASPVLSGGEKGPHPIQGLGAGFVPSILNTKIYDS IIQAPNEAAFETARAMAEKEGILVGISSGAAVWSALQLAKQPENEGKLIVVLIPSYGERY LSTPLFADLA >gi|289656352|gb|ADEA01000015.1| GENE 173 185803 - 186399 503 198 aa, chain - ## HITS:1 COG:no KEGG:NMC0714 NR:ns ## KEGG: NMC0714 # Name: not_defined # Def: putative integral membrane protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 3 195 6 198 201 169 49.0 4e-41 MGFDLAAAVVYAAVFLIAAFRAGMFQWFWGSVLLWLGCGMIGAQLLPGIWGITHLGPLFF PHLYITAASLFFFVDHWKRRPEPQLWQADCSHIWLGLFAVSNAVMTLAFLILAAAVWYHY PGGVSTFAAVSLFNLYALKPSNWFVMQAVIMMVFYLHRKAVAKQEACLFSAKQLQAGLFL ALVFQMVTVVAMMLEGHY >gi|289656352|gb|ADEA01000015.1| GENE 174 186416 - 187264 807 282 aa, chain - ## HITS:1 COG:NMA0972 KEGG:ns NR:ns ## COG: NMA0972 COG0253 # Protein_GI_number: 15793929 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate epimerase # Organism: Neisseria meningitidis Z2491 # 1 282 1 282 283 427 73.0 1e-119 MKTLKFTKMHGLGNDFMVIDGINQTFEPKEAPLSAWSDRFRGVGFDQLLLVERPSSELVD FRYRIFNADGGEVGQCGNGARCFVRFVTDKGLTDKKEILVETAGGVIVPRLLENGLVTVN MGQPRFMPSEIPFVPDSGEDSDALTHIILVGLESVPVSCVNMGNPHAVIIVEDTETAPVG QWGEAIESHEQFPERVNVGFMQIINRREIRLRVYERGTGETQACGTGACAAVVAGVRLGL LDAGESVKVMLPGGDLFISWAPEGGVMMTGPAETVFEGELQY >gi|289656352|gb|ADEA01000015.1| GENE 175 187891 - 188238 627 115 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298369276|ref|ZP_06980594.1| ## NR: gi|298369276|ref|ZP_06980594.1| TonB protein [Neisseria sp. oral taxon 014 str. F0314] # 1 115 1 115 115 174 100.0 2e-42 MNIRRTLTALAAFAVLAVSQSVMANGISFYQKASEAQAPITGKVAMRLTIGTDGDISNVR VVRSSGSLSIDNSAVQWLEAQKMTPVFVNGQAQEFSLVKEIKFSETGKINQASLK >gi|289656352|gb|ADEA01000015.1| GENE 176 188396 - 189451 1478 351 aa, chain + ## HITS:1 COG:NMB0563 KEGG:ns NR:ns ## COG: NMB0563 COG1477 # Protein_GI_number: 15676468 # Func_class: H Coenzyme transport and metabolism # Function: Membrane-associated lipoprotein involved in thiamine biosynthesis # Organism: Neisseria meningitidis MC58 # 21 351 23 351 351 460 70.0 1e-129 MSLLKNLLVIPFLILLSAGILTACDWQPARRTITLQGETMGTTYTVKYLSDGLKDLPSPE KVKSQLDLLLEEVNRQMSTYREDSEISRFNKMRETGKPMPIAADFAAVTAEAVRLNKATH GALDVTVGPLVNLWGFGPDKQLTYSPSAEEIKRASDVVGIDKISLSHNNGSATLVKSRPE VYLDLSSIAKGFGVDKLALYLESLGIRDYLVEIGGELRGKGRNAQGEPWRIGIEQPRLLQ GGGTQIIVPLDNRALATSGDYRNFHTDKQGKRLSHIINPQKMEPISHNLASISVVADTAM TADGLSTGLFVLGEEKALALAEQQGLAVFLIIRTRDGYRTEMSSKFKQLIR >gi|289656352|gb|ADEA01000015.1| GENE 177 189467 - 189682 333 71 aa, chain + ## HITS:1 COG:NMA0745 KEGG:ns NR:ns ## COG: NMA0745 COG2991 # Protein_GI_number: 15793720 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 71 1 71 71 102 71.0 1e-22 MYTILLTFGFFLLIILGMSVGYIFSKRTIKGSCGGISSLGMKKVCDCETPCDTLQKRLDK QNAAKSISVDR >gi|289656352|gb|ADEA01000015.1| GENE 178 189925 - 190002 123 25 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQTLTATGFSTRELTMTELDLVSGG >gi|289656352|gb|ADEA01000015.1| GENE 179 190268 - 190444 111 58 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKFMLTSGAIFFLYMLIFSYFFIYHEIGEAFKFTVISTLIFVPINFLLNKFFNKKFF >gi|289656352|gb|ADEA01000015.1| GENE 180 190479 - 191468 1758 329 aa, chain - ## HITS:1 COG:NMB0845 KEGG:ns NR:ns ## COG: NMB0845 COG1702 # Protein_GI_number: 15676741 # Func_class: T Signal transduction mechanisms # Function: Phosphate starvation-inducible protein PhoH, predicted ATPase # Organism: Neisseria meningitidis MC58 # 1 315 1 315 317 540 85.0 1e-153 MTHTVHLQLEDIDNTVLQRLCGALDSNLEALGKALDIQISRRFEHFTFMGELAHAGRRAL LALAEAAEQGDLDDNAIRLAAVEAKTADEKHEEKHHDQQYYFRTKRGSIGGRTPRQNGYI RALLNHDVVFGLGPAGTGKTYLAVAAAVDAMEKHQIERIVLVRPAVEAGEKLGFLPGDLA QKVDPYLRPLYDALYDLMGFDRVTKLMEKGLIEIAPLAYMRGRTLNGAYVILDEAQNTTP EQMKMFLTRIGFGAKAVITGDISQIDLPRNVKSGLKDAREKLRDVEGLYFHTFTSEDVVR HPLVQKIVEAYEAAEEAEDKISGRIGIKF >gi|289656352|gb|ADEA01000015.1| GENE 181 192042 - 192830 1315 262 aa, chain + ## HITS:1 COG:PM1078 KEGG:ns NR:ns ## COG: PM1078 COG4558 # Protein_GI_number: 15602943 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type hemin transport system, periplasmic component # Organism: Pasteurella multocida # 1 262 3 264 264 297 56.0 1e-80 MKPKHLVLSVIALTAAAHAQRIVVLTPDTADIVVALGSLDEIVGRDQTVQNPVLQSKPSI GIHRRLTVEPIIAAKPDIAIGSWMAQPADIFTRLKTAGVNAVNVAPDDSIAAYPQSIRRI GQLIGKSAQADKIASKWQADMKQQPANGKRYLFSYDGRIVSGKNTAADEIIRRAGGINAA AAIDGLKPMTREAWIAAKPDIIVIADHNTAMIGSTKAFAARPEIAGSPAAKNGKIYLWKA NDMFRYGLDTPQVVQRLNGLAK >gi|289656352|gb|ADEA01000015.1| GENE 182 193149 - 194090 1344 313 aa, chain + ## HITS:1 COG:PM1079 KEGG:ns NR:ns ## COG: PM1079 COG0609 # Protein_GI_number: 15602944 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Pasteurella multocida # 1 308 1 308 314 296 64.0 4e-80 MKLPTLLICLALTAAAVYFCCGIGFGAWESPFAMDETVRQIRLPRIYTALLVGAGLSASG AALQALFENPLADPSLIGTSGGAALGVIALLAAGGGAVGVSAAAFIGALGVCLLILAAHK LLGGGTLGLLVLGFVLSAFSGAVVSMILFLSDDLVLRSATTWLSGSLAEAGFTSPSAALA VMLPGFLLLLSAGRRLDVLMTGEDTATSMGVSVGALRVQTVIGAALMTGAAVSLAGIIGF LGMMVPNVLSQAVGGSRRKLTALSAWLGAVFLMMVDGAARWFTYPVDLPVGIVIALIGGP FFMYLFIKPLRGS >gi|289656352|gb|ADEA01000015.1| GENE 183 194139 - 194864 174 241 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 4 209 1 221 245 71 29 3e-11 MQPVFRIRNLSVRIKGKTLLEIDALDIPAGSTAVIGPNGAGKSTLLRALIGQAGQGEITL LGEAAAPQIRAGKAAWVGQHGRYNMPMTVREYIALAAFVQKGRLNHEWADELLNYFDLAA LAEKRIGRLSGGEQQRANIIRALLQNARVLLLDEPCNHLDIRHQHRLMQYLVRHKSRASS VMVLHDLNLAARYAEHIVLMDKGKIIAAGDAAAVMRPDLLEAVYGWPIRRCQDEEGIYFR S >gi|289656352|gb|ADEA01000015.1| GENE 184 194990 - 196810 2658 606 aa, chain + ## HITS:1 COG:YPO0286 KEGG:ns NR:ns ## COG: YPO0286 COG0635 # Protein_GI_number: 16120625 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Yersinia pestis # 11 428 11 429 437 322 42.0 1e-87 MTQQIVWTPRQSAPKAFPERQALMPIWGGIPIPRPQWQNIWRQKLPHAADSDALAYLHIP FCANHCVFCGFYRNAWKESYSSVYTDKIIEEMAAEAEIRQGNGKIRAVYFGGGTPTALQT PDLARLIRACYQYLPIADDCEFTIEGRMSHFDIEKAQACVEAGANRISIGVQTFDTAIRR RLGRKHGGDEAFAYLEKLCEINAVIVVDLMFGLPNQTDTVWQNDLERATALPLSGLDTYA FNLYPMLPINRMVEKGAFPAPPGFDVQADQYAYAVETLAQKGWNQVSNSHFAYPGRGERN RYNTLVKSNIPCWAFGSGAGGNFGGFSYQVQGDLDSYLATPKGEKNIAFMSGHSPNKALL GQVQHDMETGRLNPSLFDGNAAAQKLIAQWQDMQLFEEQGSDGLIRLNTSGRYWSPTLIR KLMLTLPTQEKDQTMQKLSSEQQIMLRQSLEKNPGQVLEMLAAQNQCSFEDVIRCLPENC IRQIEGSRIVEILQAVAAWDEAVTFIAHTPDAIVEVTGKLPGGKVGRGFYNFDHPETDGG VHGHIYYENCAAIYLLERPFMGKDTCSLNFINRNGGAMFKIFVGRDEAGELKQHQIEAMR KLFEAA >gi|289656352|gb|ADEA01000015.1| GENE 185 197316 - 197936 1043 206 aa, chain + ## HITS:1 COG:ECs4385 KEGG:ns NR:ns ## COG: ECs4385 COG0702 # Protein_GI_number: 15833639 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate-sugar epimerases # Organism: Escherichia coli O157:H7 # 3 202 5 199 207 88 33.0 8e-18 MQLIFGANGPSGRAFIRTLTNPADTVAVLRKPSEDSFFSEHRIQTATADALDADALDKVF AQYRPDSVISFVGGKNEQGIRSDALGNINIIAAAQTANPQARFILITSMGCGEQWDMMSE PFKQALGEAVRAKTEAEIYLKQSSLNWTILRPCGLADGDGNSYNLTLQPDGIPKKYMTRN GLAAAVSAILRNPDSIGKVYTVGAGG >gi|289656352|gb|ADEA01000015.1| GENE 186 198279 - 201458 4134 1059 aa, chain + ## HITS:1 COG:PA4897 KEGG:ns NR:ns ## COG: PA4897 COG1629 # Protein_GI_number: 15600090 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Pseudomonas aeruginosa # 42 1059 158 989 989 327 28.0 8e-89 MRNNRLKTIAACLSVLGLCPSLLAADNADASAEGAATQTVTLNPITVKGKHKDERGKNRV YTREIVNLYKGKEDVETFKGNTVSDLFSGLPGVYSGEARNSGALDPNIRGVQGQGRIPVT IDGTEQAITVWRGMFGANNRNYVDPNIISSVYVEKGPSFNREVKSGIGGSVALKTLEADD IVPEGQKYGVEIKAETSNNSIKPRKATYAENMDYRTLENPLNVMGGYWRFYADDSDRLPP RFGGKHKFSEDKAYRIAAATKQENFDAILTYAYRNKGNYFSGKKGAHRYGYYSADNAENL RRLNERGIKELSPEAPIIGLFYTPGGEVANTSLETESWLGKTTFRLPNNQSIKLGLRHTH STFGEVMPSRILSGGGFQGENVNSQNKIAEWPQAWVKQRAYNIDYLWKPEGSRWIDLNAS LWTTRTRSKTNSSGGVPGDIAWTDVGWNAAADDWIQGLRKRPGLDEGLPNTDGRFNTRQA QALYATNNRNGFNFSNRMKLRDNLELTVLGDFQNEKLATHNEFADLYGNRYKKEFDQNLI YPSSFLDTITYPRNGRRREYNLGFNFRFEPRPWLTLTAGARYTNFSLQDDSVKKFLDNGG ELEAHRGLRYTAEVVATKKDYEAYQKFNACIILPACEPTQDMLDASAKINPVGSDGILPV YINRARFDWTKDQYGKLNMADHPILNNPKVLTRVENPAYNPADPSSPRFVNKFQNLKAET ASDYSYKSALTPAQKQQALKQKGSGWAPAASVTFNLTDYARAYLRYTQTLRFPSIFEGTV GVPISPQLNTTSVNRYGYQWKPERGKNFEVGYIHDLTGMFPKMRKADFRINYFRNTTKNI IDRNDQLEFEQFDKQIRSGAELSARFDTGKVYGSLGLIRTIRNDVCDEGAAFTDRLQSTV LRLHVQSSGSKPLLRAPTCFPGGVKIDGYLSSMMQPRWSVDAELGARFLKNKLDVGTRFH WHSDVYKTRVDSWRGFERAVNDHYATAVDEVKDYTDGIEDMRWTATAVVDAYLRYRINKN ITAELVGTNLTNRYYMDPFSRSFMPAPGRTVRIGITGKF >gi|289656352|gb|ADEA01000015.1| GENE 187 201923 - 202807 1002 294 aa, chain + ## HITS:1 COG:no KEGG:PAU_01244 NR:ns ## KEGG: PAU_01244 # Name: not_defined # Def: hypothetical protein # Organism: P.asymbiotica # Pathway: not_defined # 137 293 98 246 248 108 45.0 2e-22 MTHAKLLIALATVFAASSTQAQIRTFTSGTQIGATVTNNGLPRHIELGIEGEGNYRGKAA INVVDPSLKGQGRKVANNNPTPFAKVDSIGTRPFIRRLANGIVNKDRNGVIVSRMYRMSG PAWNVLYNNKIWKMPDHSHLGRMTYGKVGNLDVYFGEWADVKAGAGAGTVGTNTSVFYNG TGKTTRMPTSGKATYAVKGINNYVNQNSPIMIGTLTADFGAKKLNGTIAKTGLSVAINNA TINTAQASFDGAAKANGVIGKTHGNFYGNNAAALAGVADFNNPKLNTAFGGTRR >gi|289656352|gb|ADEA01000015.1| GENE 188 202930 - 203817 813 295 aa, chain + ## HITS:1 COG:no KEGG:PAU_01244 NR:ns ## KEGG: PAU_01244 # Name: not_defined # Def: hypothetical protein # Organism: P.asymbiotica # Pathway: not_defined # 135 294 96 246 248 121 46.0 2e-26 MKHTKLLLIAAAVFAAAAAQAQPRSFVSGDQAGATVTDGRQPRYIRLGTESSGWYGNRAS VHIAYSNLLTYKGKRLYHTHKNSTSFARFDEIGRLPLIRRLFDGIVNRDDNGVTVTRLYR MYSPIYRYVPGGVPNDYSNLGRMSFARVGNADVYFGDWADVQPGAAAGTAGTNYSVFYNG TGKTAKMPTGGTAVYSVKGINHYVDANTALLTGDLKADFAKKRLNGTIKRPGLSVTVDNA VINTANASFGGRATANDVSGTTRGNFYGNDAAALAGVAEFARNPNLNTAFGGTKK >gi|289656352|gb|ADEA01000015.1| GENE 189 203907 - 205373 2078 488 aa, chain + ## HITS:1 COG:no KEGG:XBJ1_4406 NR:ns ## KEGG: XBJ1_4406 # Name: not_defined # Def: hypothetical protein # Organism: X.bovienii # Pathway: not_defined # 18 488 10 476 476 203 29.0 1e-50 MKRLLILPVFLSLLPHAFADDREDRFMQLKQGTELRRAQQERNEADNTAIEFGAGEVQDG EDLALSLMKAVNAQNEEETARLLDIYRRQDDYDPDIVLFAEANQAVFRDDLKAALAKYRE LYRKNPEFLRGRLDLARLLFIDKQNKESAALFDGIDIPEVPAVNEKIKVFADALKKRDAW SGSVSFGAGYDTNLNQSSGATVVRNQTSCGFDSNGQPILDDAGMLSCRNERLDAYAPDAL KNRMWVYEANLSRRISLNGHHGLQLGGYAWGRLYPGNKEYGEHNINVSPAYSFQSKDHSF SIGPQVQYEWSGGKLRDSSAGISMAYSRTFSDQASLGVQLDHKYDRYRGELKHFNGPQTL LFTTAIYALPKDWLVFGGYDYLRKNSREKVDSYRRHGLRAGVNKRFESGIDATFQAIWRK TAYQDYHAWLETRRRDFERTYQLDIKFDRPFLRGFVPVLTVKHTDNKSSSWLNRYKRNEY MFKVEYGF >gi|289656352|gb|ADEA01000015.1| GENE 190 205510 - 207090 2560 526 aa, chain - ## HITS:1 COG:NMA1182 KEGG:ns NR:ns ## COG: NMA1182 COG0138 # Protein_GI_number: 15794127 # Func_class: F Nucleotide transport and metabolism # Function: AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) # Organism: Neisseria meningitidis Z2491 # 1 526 1 530 530 1023 96.0 0 MPSIKRALISLSDKNGAVEFAQTLHKLGVEILSTGGTAKLLTDAGVPVIEVADYTGFPEM LDGRVKTLHPKIHGGILGRRDLGEHVAKMEEHGIGNIDLVCVNLYPFAATIAKPDCTLED AIENIDIGGPTMVRSAAKNWKHVAIVTDTADFPAVAAEMEANGGALSDKTRFNLSRKAFS HTAQYDGMISNYLTSLSDDVLSGTPEIGEFPSQFNQSWIKVQDMRYGENPHQRAAFYRDV YPAAGSLAAYKQLQGKELSYNNIADADAAWEAVKSFDAPACVIVKHANPCGVAVAADTLT AYKLAYATDTTSAFGGIIAFNREVDGETVKQITDNQFMEVLMAPKFTAEALEIAAAKKNV RVLEVPLEAGANRFELKRVGGGLLVQTPDIHRISRADLKVVSKRQPTEQEWNDLLFVWNV AKYVKSNAIVFGKGGQTYGIGAGQMSRVDSTRIAARKAQDAGLDLNGACAASDAFFPFRD GVDVIAEQGIKAIIHPAGSMRDQEVFDAADEHGIAMVVTGVRHFRH >gi|289656352|gb|ADEA01000015.1| GENE 191 207246 - 208121 831 291 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|42631297|ref|ZP_00156835.1| COG0697: Permeases of the drug/metabolite transporter (DMT) superfamily [Haemophilus influenzae R2866] # 1 287 1 290 290 324 53 2e-87 MFYQILSLLIWSSSFIAAKFAYTMLDAALMVQARLLISVLIVLPVCRRYLDKIPKNKWKP LLWLSFLNYVVVLMLQFIGLKYTSAASAETVIGLEPLLMVFIGHFFFRDRAEWYHWLCGL AAFAGVAVMIAGGHGGGNIGIWGCLMIFIAGIVFCSITRPTQKLIADIGAPAFTSMSLAV SAVMCLPFSLLLADSYQINWNWPGGIALLYLGVGCSWFAYWLWNKGMSRVPANLSGLLTT LEPVFGILLAVVILGERISAVSGAGMMIVVAAAFAAALLPKVLKKQVNKAV >gi|289656352|gb|ADEA01000015.1| GENE 192 208131 - 208643 574 170 aa, chain - ## HITS:1 COG:NMA1181 KEGG:ns NR:ns ## COG: NMA1181 COG0038 # Protein_GI_number: 15794126 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Neisseria meningitidis Z2491 # 2 164 50 212 217 191 70.0 7e-49 LFQRTAAPFPLLARGDRRIVPLAVAAFAAVGLLAMYSPDILGNGKAGNQLVFGGLIGWQD SLQLAVLKWLAVLLALAAGAYGGLITPSMMLGSTLSFASAALWNAFLPAMPSESAAVVGA AVFLGVSLKMPLTAVVFVLELTRAPVALLMPLCLCLTGAVAAGRLEKAIK Prediction of potential genes in microbial genomes Time: Thu May 26 13:24:15 2011 Seq name: gi|289656351|gb|ADEA01000016.1| Neisseria sp. oral taxon 014 str. F0314 cont1.16, whole genome shotgun sequence Length of sequence - 116103 bp Number of predicted genes - 106, with homology - 102 Number of transcription units - 65, operones - 27 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 629 603 ## COG0038 Chloride channel protein EriC - Term 663 - 717 13.4 2 2 Op 1 . - CDS 726 - 968 341 ## COG2901 Factor for inversion stimulation Fis, transcriptional activator 3 2 Op 2 . - CDS 1017 - 1643 1066 ## COG1280 Putative threonine efflux protein 4 2 Op 3 . - CDS 1694 - 2692 738 ## PROTEIN SUPPORTED gi|145637283|ref|ZP_01792944.1| ribosomal protein L11 methyltransferase - Prom 2716 - 2775 5.9 - Term 2791 - 2841 14.6 5 3 Tu 1 . - CDS 2865 - 3518 1058 ## COG1994 Zn-dependent proteases - Prom 3555 - 3614 3.1 - Term 3631 - 3683 13.1 6 4 Tu 1 . - CDS 3695 - 4561 1188 ## COG0500 SAM-dependent methyltransferases - Prom 4586 - 4645 3.2 + Prom 4372 - 4431 2.3 7 5 Tu 1 . + CDS 4674 - 5111 705 ## COG0328 Ribonuclease HI + Prom 5190 - 5249 4.0 8 6 Op 1 2/0.250 + CDS 5274 - 5672 594 ## COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 9 6 Op 2 . + CDS 5722 - 6912 1980 ## COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF + Prom 6959 - 7018 3.2 10 7 Tu 1 . + CDS 7058 - 8173 1883 ## COG0343 Queuine/archaeosine tRNA-ribosyltransferase + Term 8190 - 8238 14.8 - Term 8290 - 8342 6.2 11 8 Tu 1 . - CDS 8345 - 9724 1262 ## COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases - Prom 9875 - 9934 80.3 + TRNA 9856 - 9932 81.7 # Arg ACG 0 0 + TRNA 9945 - 10019 64.3 # Glu TTC 0 0 + Prom 9947 - 10006 80.4 12 9 Tu 1 . + CDS 10223 - 10849 1169 ## COG1272 Predicted membrane protein, hemolysin III homolog + Term 10863 - 10914 9.2 - Term 10851 - 10902 11.4 13 10 Tu 1 . - CDS 10929 - 11489 763 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins - Prom 11642 - 11701 4.3 + Prom 11568 - 11627 4.6 14 11 Op 1 25/0.000 + CDS 11652 - 12269 704 ## COG0194 Guanylate kinase 15 11 Op 2 18/0.000 + CDS 12320 - 12526 447 ## COG1758 DNA-directed RNA polymerase, subunit K/omega + Term 12544 - 12568 -1.0 16 11 Op 3 . + CDS 12694 - 14850 3240 ## COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases + Prom 14867 - 14926 4.5 17 12 Op 1 9/0.000 + CDS 15139 - 15351 348 ## PROTEIN SUPPORTED gi|15677780|ref|NP_274944.1| 30S ribosomal protein S21 + Term 15393 - 15434 3.1 18 12 Op 2 5/0.050 + CDS 15492 - 15938 262 ## PROTEIN SUPPORTED gi|42519249|ref|NP_965179.1| 30S ribosomal protein S21 19 12 Op 3 31/0.000 + CDS 15976 - 17751 2364 ## COG0358 DNA primase (bacterial type) 20 12 Op 4 . + CDS 17998 - 19944 3231 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) + Term 19967 - 20019 20.4 - Term 20010 - 20054 0.3 21 13 Tu 1 . - CDS 20074 - 21156 1232 ## COG0077 Prephenate dehydratase - Prom 21183 - 21242 4.3 - Term 21192 - 21235 11.1 22 14 Tu 1 . - CDS 21252 - 22748 2041 ## COG0280 Phosphotransacetylase - Prom 22806 - 22865 4.3 23 15 Tu 1 . + CDS 23234 - 23410 79 ## + Term 23465 - 23504 -1.0 - Term 23303 - 23336 1.1 24 16 Tu 1 . - CDS 23435 - 23755 597 ## COG0216 Protein chain release factor A - Prom 23984 - 24043 6.2 + Prom 23943 - 24002 10.4 25 17 Op 1 . + CDS 24041 - 25294 1657 ## COG0477 Permeases of the major facilitator superfamily + Term 25300 - 25339 5.0 26 17 Op 2 . + CDS 25375 - 26400 1459 ## COG0859 ADP-heptose:LPS heptosyltransferase + Prom 26807 - 26866 4.1 27 18 Op 1 . + CDS 26891 - 28150 1903 ## COG0014 Gamma-glutamyl phosphate reductase + Prom 28230 - 28289 4.7 28 18 Op 2 . + CDS 28314 - 29624 2128 ## COG2895 GTPases - Sulfate adenylate transferase subunit 1 + Term 29643 - 29683 10.6 + Prom 29633 - 29692 3.9 29 19 Op 1 12/0.000 + CDS 29718 - 30200 820 ## COG2980 Rare lipoprotein B 30 19 Op 2 . + CDS 30201 - 31202 1882 ## COG1466 DNA polymerase III, delta subunit 31 20 Op 1 . + CDS 31353 - 31772 739 ## NMC0659 hypothetical protein 32 20 Op 2 . + CDS 31854 - 32573 1249 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) + Term 32620 - 32665 13.0 - Term 32608 - 32651 11.7 33 21 Op 1 9/0.000 - CDS 32672 - 34027 1881 ## COG2848 Uncharacterized conserved protein 34 21 Op 2 . - CDS 34042 - 34314 452 ## COG3830 ACT domain-containing protein - Prom 34354 - 34413 4.6 - Term 34576 - 34644 7.9 35 22 Tu 1 . - CDS 34665 - 35723 1505 ## COG0787 Alanine racemase - Prom 35785 - 35844 4.8 + Prom 35793 - 35852 4.5 36 23 Tu 1 . + CDS 35939 - 36403 739 ## COG1522 Transcriptional regulators + Term 36420 - 36466 7.1 - Term 36757 - 36791 -0.9 37 24 Op 1 . - CDS 36894 - 38231 1441 ## NMO_1462 putative GTP-binding conserved hypothetical protein 38 24 Op 2 . - CDS 38257 - 39606 1354 ## NMB1645 hypothetical protein - Prom 39730 - 39789 5.4 + Prom 39668 - 39727 2.9 39 25 Tu 1 . + CDS 39756 - 40712 1499 ## APJL_1729 hypothetical protein + Term 40738 - 40787 11.9 - Term 40724 - 40775 13.1 40 26 Tu 1 . - CDS 40923 - 41744 948 ## D11S_2007 lipoprotein GNA1870 - Prom 41934 - 41993 5.1 - Term 41980 - 42026 12.8 41 27 Op 1 . - CDS 42050 - 44305 3311 ## COG3256 Nitric oxide reductase large subunit 42 27 Op 2 . - CDS 44348 - 44455 58 ## - Prom 44677 - 44736 4.0 + Prom 44458 - 44517 6.7 43 28 Tu 1 . + CDS 44688 - 45887 1197 ## COG2132 Putative multicopper oxidases + Term 45907 - 45956 12.8 + Prom 45917 - 45976 4.3 44 29 Tu 1 . + CDS 46156 - 46911 871 ## COG1262 Uncharacterized conserved protein + Term 46921 - 46981 1.1 + Prom 46965 - 47024 6.9 45 30 Tu 1 . + CDS 47125 - 47394 443 ## PROTEIN SUPPORTED gi|15676513|ref|NP_273653.1| 30S ribosomal protein S15 + Term 47406 - 47441 5.8 - Term 47537 - 47584 13.3 46 31 Op 1 . - CDS 47607 - 48482 853 ## COG0777 Acetyl-CoA carboxylase beta subunit 47 31 Op 2 . - CDS 48585 - 49376 527 ## PROTEIN SUPPORTED gi|149916131|ref|ZP_01904653.1| 50S ribosomal protein L25/general stress protein Ctc - Prom 49407 - 49466 7.3 - Term 49420 - 49468 14.0 48 32 Tu 1 . - CDS 49488 - 49967 538 ## COG3030 Protein affecting phage T7 exclusion by the F plasmid - Prom 49998 - 50057 4.8 + Prom 49937 - 49996 2.4 49 33 Tu 1 . + CDS 50150 - 50839 873 ## COG0739 Membrane proteins related to metalloendopeptidases + Term 50880 - 50912 1.0 - Term 50723 - 50757 -1.0 50 34 Tu 1 2/0.250 - CDS 50928 - 51494 1002 ## COG0717 Deoxycytidine deaminase 51 35 Op 1 2/0.250 - CDS 51557 - 51985 622 ## COG4642 Uncharacterized protein conserved in bacteria 52 35 Op 2 . - CDS 52047 - 52946 1396 ## COG2974 DNA recombination-dependent growth factor C - Prom 53116 - 53175 78.8 + TRNA 53099 - 53174 55.4 # Glu TTC 0 0 53 36 Tu 1 . + CDS 53471 - 54043 951 ## gi|298369345|ref|ZP_06980663.1| conserved hypothetical protein + Term 54079 - 54118 10.0 - Term 54067 - 54106 10.0 54 37 Tu 1 . - CDS 54124 - 54330 388 ## NGK_2001 hypothetical protein - Prom 54391 - 54450 3.3 - Term 54387 - 54436 10.7 55 38 Op 1 . - CDS 54456 - 55622 1592 ## COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases - Prom 55681 - 55740 2.8 - Term 55735 - 55794 11.2 56 38 Op 2 . - CDS 55796 - 56989 2004 ## COG1448 Aspartate/tyrosine/aromatic aminotransferase - Prom 57034 - 57093 3.5 - Term 57098 - 57133 2.3 57 39 Tu 1 . - CDS 57154 - 58320 1679 ## COG1488 Nicotinic acid phosphoribosyltransferase - Prom 58384 - 58443 2.1 - Term 58397 - 58443 -0.3 58 40 Op 1 1/0.300 - CDS 58493 - 59359 1117 ## COG1354 Uncharacterized conserved protein 59 40 Op 2 . - CDS 59356 - 60168 763 ## COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 - Prom 60222 - 60281 3.8 + Prom 60230 - 60289 5.2 60 41 Tu 1 . + CDS 60337 - 60804 743 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins + Term 60852 - 60903 19.4 - Term 60786 - 60825 0.3 61 42 Tu 1 . - CDS 60958 - 61641 815 ## COG1525 Micrococcal nuclease (thermonuclease) homologs - Prom 61683 - 61742 3.9 - Term 61662 - 61705 12.1 62 43 Op 1 2/0.250 - CDS 61748 - 62419 1259 ## COG0120 Ribose 5-phosphate isomerase 63 43 Op 2 . - CDS 62486 - 62974 696 ## COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase - Prom 63103 - 63162 1.6 64 44 Op 1 . - CDS 63177 - 63512 425 ## gi|298369356|ref|ZP_06980674.1| hypothetical protein HMPREF9016_01026 65 44 Op 2 2/0.250 - CDS 63544 - 64230 254 ## PROTEIN SUPPORTED gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 66 44 Op 3 . - CDS 64227 - 64949 937 ## COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases - Prom 65115 - 65174 8.8 + Prom 65147 - 65206 10.2 67 45 Op 1 . + CDS 65243 - 65719 388 ## COG3467 Predicted flavin-nucleotide-binding protein + Term 65750 - 65788 7.1 + Prom 65785 - 65844 3.0 68 45 Op 2 . + CDS 65869 - 66552 759 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases + Term 66755 - 66801 6.4 - Term 66482 - 66511 -0.9 69 46 Tu 1 . - CDS 66702 - 66803 88 ## - Prom 66823 - 66882 6.1 70 47 Tu 1 . + CDS 67147 - 68511 1852 ## COG0733 Na+-dependent transporters of the SNF family + Term 68534 - 68584 9.1 + Prom 68553 - 68612 5.0 71 48 Tu 1 . + CDS 68660 - 71104 3076 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins + Term 71123 - 71172 11.0 + Prom 71170 - 71229 4.7 72 49 Op 1 29/0.000 + CDS 71363 - 72673 2054 ## COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) + Term 72697 - 72740 8.0 73 49 Op 2 . + CDS 72756 - 73376 987 ## COG0740 Protease subunit of ATP-dependent Clp proteases + Term 73393 - 73434 12.0 - Term 73381 - 73422 12.0 74 50 Tu 1 . - CDS 73449 - 76334 2425 ## COG2931 RTX toxins and related Ca2+-binding proteins - Prom 76458 - 76517 6.1 - Term 76507 - 76555 6.2 75 51 Op 1 20/0.000 - CDS 76584 - 79421 3859 ## COG0532 Translation initiation factor 2 (IF-2; GTPase) 76 51 Op 2 32/0.000 - CDS 79433 - 80935 1015 ## PROTEIN SUPPORTED gi|17988250|ref|NP_540884.1| transcription elongation factor NusA 77 51 Op 3 . - CDS 80966 - 81397 439 ## COG0779 Uncharacterized protein conserved in bacteria - Prom 81460 - 81519 7.5 + Prom 81365 - 81424 4.8 78 52 Tu 1 . + CDS 81627 - 82733 1313 ## COG1932 Phosphoserine aminotransferase + Prom 82772 - 82831 2.1 79 53 Tu 1 . + CDS 82863 - 83420 705 ## COG0778 Nitroreductase - Term 83631 - 83675 13.2 80 54 Op 1 4/0.050 - CDS 83695 - 84576 911 ## COG0524 Sugar kinases, ribokinase family 81 54 Op 2 . - CDS 84576 - 85901 1232 ## COG0477 Permeases of the major facilitator superfamily - Prom 85924 - 85983 3.0 - Term 86411 - 86451 8.0 82 55 Op 1 . - CDS 86469 - 86792 353 ## NMO_0620 hypothetical protein 83 55 Op 2 13/0.000 - CDS 86776 - 87078 269 ## PROTEIN SUPPORTED gi|148826992|ref|YP_001291745.1| 50S ribosomal protein L35 84 55 Op 3 . - CDS 87152 - 89515 2224 ## COG0072 Phenylalanyl-tRNA synthetase beta subunit 85 55 Op 4 . - CDS 89548 - 90549 369 ## gi|298369377|ref|ZP_06980695.1| conserved hypothetical protein - Prom 90577 - 90636 2.2 + Prom 90331 - 90390 5.9 86 56 Tu 1 . + CDS 90626 - 91699 345 ## COG0270 Site-specific DNA methylase - Term 91508 - 91561 1.1 87 57 Tu 1 . - CDS 91694 - 92113 177 ## COG3727 DNA G:T-mismatch repair endonuclease - Term 92120 - 92167 6.1 88 58 Op 1 13/0.000 - CDS 92170 - 93162 1330 ## COG0016 Phenylalanyl-tRNA synthetase alpha subunit - Prom 93287 - 93346 5.2 - Term 93364 - 93391 0.1 89 58 Op 2 46/0.000 - CDS 93410 - 93769 585 ## PROTEIN SUPPORTED gi|59800746|ref|YP_207458.1| 50S ribosomal protein L20 90 58 Op 3 36/0.000 - CDS 93782 - 94060 450 ## PROTEIN SUPPORTED gi|194098022|ref|YP_002001070.1| putative 50S ribosomal protein L35 - Term 94070 - 94111 6.3 91 58 Op 4 16/0.000 - CDS 94126 - 94599 563 ## PROTEIN SUPPORTED gi|167856598|ref|ZP_02479300.1| 50S ribosomal protein L35 92 58 Op 5 . - CDS 94666 - 96579 1315 ## COG0441 Threonyl-tRNA synthetase - Prom 96721 - 96780 3.7 - TRNA 96633 - 96709 93.2 # Val GAC 0 0 - Term 96855 - 96918 6.5 93 59 Tu 1 . - CDS 96937 - 97128 124 ## COG0583 Transcriptional regulator - Prom 97167 - 97226 2.8 - Term 97497 - 97538 10.0 94 60 Tu 1 . - CDS 97556 - 100039 4058 ## COG0058 Glucan phosphorylase - Prom 100074 - 100133 3.9 95 61 Op 1 9/0.000 - CDS 100295 - 102277 2297 ## COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases - Prom 102298 - 102357 2.0 96 61 Op 2 . - CDS 102412 - 106737 5177 ## COG0296 1,4-alpha-glucan branching enzyme - Prom 106771 - 106830 4.6 - Term 106966 - 107024 22.3 97 62 Tu 1 . - CDS 107046 - 107525 661 ## COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 - Prom 107588 - 107647 2.8 + Prom 107807 - 107866 9.1 98 63 Op 1 . + CDS 108060 - 108347 244 ## + Term 108362 - 108407 8.2 + Prom 108351 - 108410 3.3 99 63 Op 2 . + CDS 108439 - 109812 2017 ## COG0277 FAD/FMN-containing dehydrogenases + Term 109830 - 109887 1.3 + Prom 109894 - 109953 2.6 100 63 Op 3 . + CDS 109982 - 111865 2914 ## COG1297 Predicted membrane protein + Term 111881 - 111923 14.2 - Term 111864 - 111917 19.0 101 64 Op 1 5/0.050 - CDS 111978 - 112487 437 ## COG3762 Predicted membrane protein 102 64 Op 2 8/0.050 - CDS 112487 - 113383 1002 ## COG1512 Beta-propeller domains of methanol dehydrogenase type 103 64 Op 3 . - CDS 113447 - 114037 930 ## COG1704 Uncharacterized conserved protein - Prom 114085 - 114144 4.1 - Term 114139 - 114192 19.0 104 65 Op 1 . - CDS 114315 - 114494 285 ## gi|298369397|ref|ZP_06980715.1| conserved hypothetical protein 105 65 Op 2 . - CDS 114507 - 115097 808 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog - Term 115144 - 115179 -0.7 106 65 Op 3 . - CDS 115197 - 116102 875 ## COG2333 Predicted hydrolase (metallo-beta-lactamase superfamily) Predicted protein(s) >gi|289656351|gb|ADEA01000016.1| GENE 1 2 - 629 603 209 aa, chain - ## HITS:1 COG:NMB0982 KEGG:ns NR:ns ## COG: NMB0982 COG0038 # Protein_GI_number: 15676874 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Neisseria meningitidis MC58 # 29 209 1 181 380 231 71.0 6e-61 MNNRTKLWLALTMVGITGGLVGIVLTELLHFVQHHAYGYALDGGHQSFREGVEAAAPLRR FYALLSCGVAAGGGWWLLKRYGKPLVGIKASLAKPLAGLPFAATVSHALLQIVTVGLGSP LGREVAPREMTAAFASLWVRRLGLDEDGARLLIACASGAGLAAVYNVPLAATLFILETML GVWTRQAVTAALFCSVLATAVSRMGLGDM >gi|289656351|gb|ADEA01000016.1| GENE 2 726 - 968 341 80 aa, chain - ## HITS:1 COG:NMA1632 KEGG:ns NR:ns ## COG: NMA1632 COG2901 # Protein_GI_number: 15794526 # Func_class: K Transcription; L Replication, recombination and repair # Function: Factor for inversion stimulation Fis, transcriptional activator # Organism: Neisseria meningitidis Z2491 # 6 78 7 79 79 119 80.0 2e-27 MKQKIDIAQCIEQNLKQYFKDLNGETPCAVYEMVLNQVEKPLLGCVMEECGGNQSKAAAV LGLNRNTLRKKLVQHGLLEN >gi|289656351|gb|ADEA01000016.1| GENE 3 1017 - 1643 1066 208 aa, chain - ## HITS:1 COG:BH2932 KEGG:ns NR:ns ## COG: BH2932 COG1280 # Protein_GI_number: 15615494 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Bacillus halodurans # 13 208 8 209 210 116 32.0 3e-26 MDFWHGFWIITGVHFLACMSPGPDFVLVSQQSLGRGRAAGLLTTLGIALGFGVHIVYSVF GLVTLVAQSAPLLTAVKIIGGLYLVYIGYKGIRAKAGGGVLEIRAEKAAREPVGKTVWRG ALCNVLNPKAVVYMLSLFTVVLSPATPMWQMAVYGAWMTLMIFIWFALVALMLSVPAVSR RFSRFGHWIDRVCGGALALLGVKVMSGS >gi|289656351|gb|ADEA01000016.1| GENE 4 1694 - 2692 738 332 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145637283|ref|ZP_01792944.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae PittHH] # 1 309 1 309 326 288 48 6e-77 MQIGAYTIDTPIALAPMAGITDKPFRRLCRAFGAGWAVGEMLHSDPAFRNTAKTLHRSDF GGEEGVAAVQIAGSDPRQMAEAAVYNVALGAQLIDINMGCPAKKVCNVQAGSALMQNEPL VAAILEAVVGAAGVPVTLKTRLGWHDDHKNILTVARIAEESGIAAIAIHGRTRTQMYRGE ASYELIAEAKGRLNIPVWVNGDITSPQKAAAVLRQTGADGVMIGRGAQGRPWLFRDLAHY ARHGVLPEALSLRECGETVLAHVRAMHDFYGAAAGARIARKHIGWYLDSMPEGEAARREI NRLDDAAAQYDAVAAYLDRLPELTDAWACGYR >gi|289656351|gb|ADEA01000016.1| GENE 5 2865 - 3518 1058 217 aa, chain - ## HITS:1 COG:NMB1731 KEGG:ns NR:ns ## COG: NMB1731 COG1994 # Protein_GI_number: 15677577 # Func_class: R General function prediction only # Function: Zn-dependent proteases # Organism: Neisseria meningitidis MC58 # 1 213 1 212 212 278 72.0 8e-75 MFRNFDLGVFLLAVLPVLLALTVREVVRGYTARRWGDHTAEQYGRLTLNPLPHIDPIGTV LVPLFCLMLSAPFLFGWARPIPIDSRNFRDPRRAWRWIAVSGPLANLLMAFFWGLVIVSA IYVPENFQSPLVQMAGYGILINAVLFALNLIPILPWDGGIIIDTFLPAKQSMQFRKIEPY GTWIILILLFTGLLGKLIMPMVAAVQIAVQALMTLFV >gi|289656351|gb|ADEA01000016.1| GENE 6 3695 - 4561 1188 288 aa, chain - ## HITS:1 COG:NMB1617_2 KEGG:ns NR:ns ## COG: NMB1617_2 COG0500 # Protein_GI_number: 15677467 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Neisseria meningitidis MC58 # 98 288 1 191 191 321 81.0 1e-87 MDRQELYLYKQMPKWTKDTVPEAFLSKHNTAEGTWGHITVTKGRLKFYELDEKGAVQEEY ELSPEGGAWMIAPQQWHKIEPLSDDLEMQLEFYCTADDYFSKKYGMSATHSAVRAAEGIV PAGKALDMGCGQGRNALFLALKGFDVTAVDNNPHAVQNVAELARAEGLPVRAFEYDLNAA HLQDDFDYIVATVVFMFLRPQSVPQIIADMQAHTNPGGYNLIVSAVDTADFPCPMPFPFK FGEGELRGYYQDWQLVEYKEELGSMHARDEAGNPIQFKFVTMLAKKPE >gi|289656351|gb|ADEA01000016.1| GENE 7 4674 - 5111 705 145 aa, chain + ## HITS:1 COG:NMA1817 KEGG:ns NR:ns ## COG: NMA1817 COG0328 # Protein_GI_number: 15794707 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HI # Organism: Neisseria meningitidis Z2491 # 1 144 1 144 145 249 88.0 1e-66 MDKTVYLYTDGACKGNPGAGGWGVLLRYGTHEKELFGGEAETTNNRMELTAVIEGLKSLK RRCTVEICTDSQYVKNGMESWIHGWKKNGWKTAAKQPVKNDDLWKELDNLVRQHDVRWTW VKGHAGHPENEKADVLANQGAAQFL >gi|289656351|gb|ADEA01000016.1| GENE 8 5274 - 5672 594 132 aa, chain + ## HITS:1 COG:NMB1619 KEGG:ns NR:ns ## COG: NMB1619 COG0537 # Protein_GI_number: 15677469 # Func_class: F Nucleotide transport and metabolism; G Carbohydrate transport and metabolism; R General function prediction only # Function: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases # Organism: Neisseria meningitidis MC58 # 3 131 6 134 134 217 81.0 5e-57 MTCPICQAQNEDILLQTANLRVIAVHNEAGAPAFCRVIWRRHVAEMTDLSAAERAEIMET VYKVEAAMRRVFRPAKINLASLGNVVPHLHWHVIARFENDANFPAPIWAPAVRRHEMSLP DGWPEQIKALLV >gi|289656351|gb|ADEA01000016.1| GENE 9 5722 - 6912 1980 396 aa, chain + ## HITS:1 COG:NMA1819 KEGG:ns NR:ns ## COG: NMA1819 COG1619 # Protein_GI_number: 15794709 # Func_class: V Defense mechanisms # Function: Uncharacterized proteins, homologs of microcin C7 resistance protein MccF # Organism: Neisseria meningitidis Z2491 # 6 377 6 379 394 539 72.0 1e-153 MDWNPSRRRFLRASAAVAGAGLLQACGTGSTSQPAATNNPQKAKPVQPISSSTVHHGDNV LRVVAPSGFAEDINRVNIGLTRLYNAGFTVTNQEAGSRRYQRFAGTDAQRIADFQDVAAG RVKTPKVLMGLRGGYGAARILPHIDFASLGARMRERGTLFFGFSDVCAVQLALLAKGNVP SFAGPMVYSEFGKPQPSTYTMDSFIRGSTSAGNTVDVPVIQRSDVNAEGTFWGGNLSVLA SLAGSPYMPDIQGGILFIEDVGEQPYRIERMLNTLYLAGVLQKQRAIVFGDFRMGTIRDI YDSSYDFPSVVSQIQRTIRVPVLTGFPFGHIANKSTFPLGAHAKIRSSGNGGYSVTFSGY PTLNAATLNLNSLLPPPVTFGNYVPVGNGTTEEVLE >gi|289656351|gb|ADEA01000016.1| GENE 10 7058 - 8173 1883 371 aa, chain + ## HITS:1 COG:NMA0928 KEGG:ns NR:ns ## COG: NMA0928 COG0343 # Protein_GI_number: 15793887 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Queuine/archaeosine tRNA-ribosyltransferase # Organism: Neisseria meningitidis Z2491 # 1 371 1 371 371 749 93.0 0 MLKFTLHNKDGHARRGTLELNHGSIETPVFMPVGTYGSVKAMTPQNLHDINAQIILGNTY HLWLRPGLEVIEQFGGLHDFIGWNKPILTDSGGFQVFSLSDMRKLTEEGCTFKSPINGNK LFLSPEISMKIQTVLNSDIAMQLDECTPGEATREQAEKSLQMSLRWAERSKKAFEDLNNP NVLFGIVQGAMYEDLREQSLRGLEQLDFPGLAIGGLSVGEPKPEMYRMLRAVGPILPEHK PHYLMGVGTPEDLVYGVAHGVDMFDCVMPTRNARNGWLFTRFGDIKIKNAKHKHDTRPLD ESCTCYACQNFSRAYLHHLHRAGEILGAQLNTIHNLHFYQTIMAEMREAIEQGKFADWQA QFHEHRARGAD >gi|289656351|gb|ADEA01000016.1| GENE 11 8345 - 9724 1262 459 aa, chain - ## HITS:1 COG:NMB1451_1 KEGG:ns NR:ns ## COG: NMB1451_1 COG0847 # Protein_GI_number: 15677307 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, epsilon subunit and related 3'-5' exonucleases # Organism: Neisseria meningitidis MC58 # 2 164 15 177 177 251 69.0 3e-66 MRWPNLAAAFAGFGRPVAVVDLESTGGNFYRDRITEVAVLRFERGAAKRYEWLVNPQQPI PKFVADLTGITDEAVSGAPVFSDIAADLLPLLHGAVVVAHNSRFDYTFLRHEFRRAGMDF AAPALCTVQLSRRLYPQFYRHNLDSIIERFGIAVESRHRAMADVAALSDFLERSLVEKGA EEWERHCRSLMNPKMLPASLPEGLSRRLYRLPDSSGVLIWLDESEGALAVGVHERAYSET AAALHGGNIPPYVAHAAEVRFLPAAGGLHALWLKAQAEREYALRPSEKSGGYLTVNFVPD ERGALQARIVPLANGSRDGRPYGLFVHKKAARRALAAWALEHGLCPDSLNILPEKHAQGL PCPVHAVGRCSGGCGRQDGIGRQNERILTAAHLLPVTDWGRVREMEVTETDVLTGESITL RCAGGALALPDGSWYFDDTLPAVLKAKFKQGRDGIKVVA >gi|289656351|gb|ADEA01000016.1| GENE 12 10223 - 10849 1169 208 aa, chain + ## HITS:1 COG:NMA1900 KEGG:ns NR:ns ## COG: NMA1900 COG1272 # Protein_GI_number: 15794785 # Func_class: R General function prediction only # Function: Predicted membrane protein, hemolysin III homolog # Organism: Neisseria meningitidis Z2491 # 1 208 1 208 208 211 62.0 6e-55 MYKGERFNAYSHLIGTMLAVTGMVLLTVKAAVNFDPYKLAGALTYGICLILLYLGSTLYH SIPQPKAKAVLQKIDHCMIYLLIAGSYTPFTLVTLKGGWGWSLFGVSWGLALFGITQELT IGRKSEKRRLSMALYVIMGWLILVAMYPLAKILSAAGLFWLALGGILYSAGIYWFVNDMK IKHGHGIWHLFVLGGSLAQFVCIYFYVI >gi|289656351|gb|ADEA01000016.1| GENE 13 10929 - 11489 763 186 aa, chain - ## HITS:1 COG:NMA1920 KEGG:ns NR:ns ## COG: NMA1920 COG0503 # Protein_GI_number: 15794805 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Neisseria meningitidis Z2491 # 1 186 12 197 199 319 87.0 2e-87 MLIHPEVMGVEALAAKIRKIENWPQKGILFHDITPVLQSAEYFRLLVDLLVYRYMGQKID AVAGLDARGFIIGAALAYQLNVGFVPIRKKGKLPFDAVSQSYALEYGEATVEIHTDAVKK GARVLLVDDLVATGGTMLAGVELIRKLGGEVVEAAVILEFTDLTGGEKIRASGVPLFSLC RNKGCM >gi|289656351|gb|ADEA01000016.1| GENE 14 11652 - 12269 704 205 aa, chain + ## HITS:1 COG:NMA1919 KEGG:ns NR:ns ## COG: NMA1919 COG0194 # Protein_GI_number: 15794804 # Func_class: F Nucleotide transport and metabolism # Function: Guanylate kinase # Organism: Neisseria meningitidis Z2491 # 1 205 1 205 205 285 71.0 5e-77 MQTNKKGNIFIISAASGTGKTTLVSRLLKNNGDIRVSISHTTRQPREGERHGVHYHFVPK EEFESLIRQNAFLEHADVFGNYYGTSIAGVDELRGQGYDVILEIDVQGAEQVRRLLPEAC SIFILPPSFEILASRLTNRGTDSEEVIRSRLDKARYEIGQAPLFDYIVVNDDLDTAEADL LHIIKAGRLKQTVQKPFIENLLENS >gi|289656351|gb|ADEA01000016.1| GENE 15 12320 - 12526 447 68 aa, chain + ## HITS:1 COG:NMA1918 KEGG:ns NR:ns ## COG: NMA1918 COG1758 # Protein_GI_number: 15794803 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, subunit K/omega # Organism: Neisseria meningitidis Z2491 # 1 68 1 68 68 111 91.0 3e-25 MARITTEDCTGKIPNHFDLTLVAARRARQLENGNTPLVDDIRHNKPTVTALREIAAGEIG MELLKRNK >gi|289656351|gb|ADEA01000016.1| GENE 16 12694 - 14850 3240 718 aa, chain + ## HITS:1 COG:NMB1659 KEGG:ns NR:ns ## COG: NMB1659 COG0317 # Protein_GI_number: 15677508 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Guanosine polyphosphate pyrophosphohydrolases/synthetases # Organism: Neisseria meningitidis MC58 # 1 718 1 718 718 1284 86.0 0 MPAPQPTAPYDALTAEARELLFRTASYLSENEQAELEKAVAFAFRAHDGQTRKSGEPYIT HPLAVATQLAMWHMDIQGLCGGVLHDVLEDTGVSKIEMAAEFGDTIAEMVDGLSKLEKLK FEDQAEHQAESFRKLILAMTKDVRVIVVKLADRLHNMRTLGSMRPDKRRRIAKETLEIYA QIANRIGLNNAYQELQDLSFKNLHPNRYETLRKAMNNSRKNRRDVVGKVLHAFSQRLVGA NIEAKIKGREKNLYSIHQKMLAKKLRFADVMDIYGFRVIVDSIPACYAALGALHTLYKPK PGRFKDYIAIPKSNGYQSLHTTLVGPYGLPIEVQIRTREMDAVAEGGVAGHWIYKSGENT VDQAVLHTNQWLKNILDLQASSANAIEFLEHIKVDLFPNEVYILTPKGKILTLPKGSTPI DFAYAVHTDIGHKTVAARINNTMMPLRTKLKTGDSVEIITSEHAKPNPAWLNFAVSSRAR SAIRQYVKNLNHHDAIVLGENLLQKALSSLLPKDILLSDDLKEKYLADLNDKQTSFEEVL YNVGMGHTLPVSVAMHIAELAGEHFGSEIKLSPIKINGQETGRVHLAECCHPVSGDPVRA VLTKDRGMIIHRDICPTLLKTDPEQQLDAGWDNIGNQTYRTILLIQSADTHGLLALMAQA ISSSGADIESVDTPSRTQDGTEGFVEFRFIVKTADLEQLNRIIHNLHTIPQVRKVIRN >gi|289656351|gb|ADEA01000016.1| GENE 17 15139 - 15351 348 70 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15677780|ref|NP_274944.1| 30S ribosomal protein S21 [Neisseria meningitidis MC58] # 1 70 1 70 70 138 100 1e-31 MPAIRVKENEPFEVAMRRFKRAVEKTGLLTELRAREAYEKPTTERKRKKAAAVKRLQKRL RSQQLPPKMY >gi|289656351|gb|ADEA01000016.1| GENE 18 15492 - 15938 262 148 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|42519249|ref|NP_965179.1| 30S ribosomal protein S21 [Lactobacillus johnsonii NCC 533] # 1 134 1 134 147 105 39 1e-21 MSLRERLTEDMKTAMRAKDQVSLGTIRLINAAVKQFEVDERTEADDAKITAILTKMVKQR KDSAKIYAEAGRQDLADKENAEMEILYRYLPQMMSAEEIQAAVAAAVAQTGASGMADMGK VMGVLKTSLAGKADMGEVNKILKAVLSA >gi|289656351|gb|ADEA01000016.1| GENE 19 15976 - 17751 2364 591 aa, chain + ## HITS:1 COG:NMA1736 KEGG:ns NR:ns ## COG: NMA1736 COG0358 # Protein_GI_number: 15794629 # Func_class: L Replication, recombination and repair # Function: DNA primase (bacterial type) # Organism: Neisseria meningitidis Z2491 # 1 575 1 574 590 1041 88.0 0 MIPSEFIDELLAKVDVVDIIDEQVPLKKSGANYMACCPFHKEKTPSFSVSPSKQFYHCFS CGAHGSAIGFVMEHQGLSFPEAVQYLADRVGMTVPQVRGRNDNPEVRAERKKKQQTLEET VAAAADFYAQQLKFNPAAKEYLDKRGLSAEVIAHYGLGYAPDGWQPLAQVFQPYPNTALV DSGMVIANEGKHYDRFRHRIMFPIRDPRGQVIGFGGRVLDNSKPKYLNSPDTPLFDKGKN LYGLYEGRAAIKDAGRILVVEGYMDVVALSQFGIGYSVAALGTATTAEHVKILMRQTDDI YFCFDGDSAGRKAAWRALENALPQLKDGKSLHFLFLPEEHDPDSYVRAYGKAQFEDALLH QSKPLSEYFWDALSDGLNLNMQEGKAELVKTSSPLLAQITAPALGFLLKQRLSELVGIDP DNLAQLLGQEAPKRHVKQKSYKLPAISVKQPVMLTLVQRQIRSLLINPAWASYIDLPEYL PLTGDFACLANLAEMIKSHPQPPSSAQILEHMRGSPYETALNQIFQSALNSSDEMESGNE EDCESFKIGMKKLLNELKYSQIELLKQKSSQSGLNNYEKQLLMSLLISKAN >gi|289656351|gb|ADEA01000016.1| GENE 20 17998 - 19944 3231 648 aa, chain + ## HITS:1 COG:NMA1737 KEGG:ns NR:ns ## COG: NMA1737 COG0568 # Protein_GI_number: 15794630 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Neisseria meningitidis Z2491 # 1 647 1 641 642 964 86.0 0 MSKHTDEYHDQDDNRPLTVEEQRARLRQLIIMGKERGYITYSEINDALPDDMSDADQIDN IVSMISGLGIQVTEQAPDAEDILLSDNAATITDDDAVEEAEAALSSADSEFGRTTDPVRM YMREMGQVDLLTREDEIIIAKKIENALKNMVQAISACPGSVAEILALIEQVRNDEIRVDE VVEAIIDPNEVLLNELGLGHLENNASADDNNDSDNENDDESDDDEDDGNNDSDALSAANL EELKQKVLEHFVQIETAYTKMIEQLTKHHSRHAAYLEHRDAIASKLLEVRFATRQIESLS GSLRNRVDNIRKLEREIRDICLDRVHMDRDYFIRNFLPVITDLNWLENEIAKENAWSGAL DRFRHAILEKQTELAEMEKETRISIGELKDINKNMVISEKETAAAKQEMIQANLRLVISI AKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTI RIPVHMIETINKMNRISRQYLQETGEEPDSAKLAELMEMPEDKIRKIMKIAKEPISMETP IGDDDDSHLGDFIEDINNVAPADAAMYSSLHEVTKEVLESLTPREAKVLRMRFGIDMNTD HTLEEVGKQFDVTRERIRQIEAKALRKLRHPTRSDRLRSFLDSEDNKQ >gi|289656351|gb|ADEA01000016.1| GENE 21 20074 - 21156 1232 360 aa, chain - ## HITS:1 COG:NMB0446_2 KEGG:ns NR:ns ## COG: NMB0446_2 COG0077 # Protein_GI_number: 15676357 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydratase # Organism: Neisseria meningitidis MC58 # 88 360 1 273 273 431 78.0 1e-121 MSVDEQLQPHRDAIDAIDEAVLRLFNERAAHAHAIGELKGTGAVYRPEREAAVLHRIQSL NKGPLPNESVARLFREIMSECLAVERPLTIAYLGPKGTFTQQAAIKHFGHAACTKACTTV DDCFKLVETRQADYLVAPVENSTEGSIGRTLDLIAVSPLKACGEVVVRIHHNLLRKDNHQ INGIRKVFAHAQALAQCNDWLGRNLPEAERIPVFSNAEAARIVAESDDGTLAAVAGVTAA EIYRLSMAAKCIEDEPSNTTRFLVFGHQDTVSTGSDKTSLVVSAPNKAGAMMSLLRPFTD LGISMTKFESRPSKSAMWEYLFFIDIEGHKDDENVRVALKLLDERASFVKVAGSYPTAVL >gi|289656351|gb|ADEA01000016.1| GENE 22 21252 - 22748 2041 498 aa, chain - ## HITS:1 COG:NMB0631_2 KEGG:ns NR:ns ## COG: NMB0631_2 COG0280 # Protein_GI_number: 15676533 # Func_class: C Energy production and conversion # Function: Phosphotransacetylase # Organism: Neisseria meningitidis MC58 # 175 498 1 324 324 567 92.0 1e-161 MANVLVVPISSGADGLVVTGAVAAALGAQTFRAFDNKAETLLAQGKSDDWFDSLVGKVEA LKAEKLVIEGIYPNAEKAFLFGKNFELALSFDAAVVFAVAGDDVQVLATQLNLAKQIFAT SPDSVAGFVLDGADEATGSAVAEKTGLCYFGSSSAVKDTERLAARQSSRLSPAQFRFNLI DFARKADKRIVLPEGSEPRTVEAAAICHEKGIARCVLLAKQEEVEAVAKERGVTLPDSLE IVDPASLVEQYVAPMCELRKSKGLTPEDARKQLQDTVVLGTMMMAQNDVDGLVSGAVHTT ANTIRPALQLIKTAPGASLVSSVFFMLLPNQVLVFGDCAVNPNPTAEQLADIAIQSADSA KAFGIEPKVALISYSTVNSGSGPDVDVVVEAAKLAKEKRPDLAIDGPLQYDAATVPDVAK SKAPNSSVAGRATVLVFPDLNTGNCTYKAVQRTANVLSVGPLLQGLRKPVNDLSRGALVD DIVYTIALTAVQAKQMEG >gi|289656351|gb|ADEA01000016.1| GENE 23 23234 - 23410 79 58 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRNDLGIFFFSIFFLCFFVGRLFRFKEHFSAEKYVFGINWVYLLIAAASTAVFYISKS >gi|289656351|gb|ADEA01000016.1| GENE 24 23435 - 23755 597 106 aa, chain - ## HITS:1 COG:NMB1686 KEGG:ns NR:ns ## COG: NMB1686 COG0216 # Protein_GI_number: 15677534 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor A # Organism: Neisseria meningitidis MC58 # 1 106 253 358 358 191 99.0 3e-49 MVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGSGDRSECIRTYNY PQGRVTDHRINLTLHKLDFVMDGDLEEITNALIAEHQAELLAAMGD >gi|289656351|gb|ADEA01000016.1| GENE 25 24041 - 25294 1657 417 aa, chain + ## HITS:1 COG:all4025 KEGG:ns NR:ns ## COG: all4025 COG0477 # Protein_GI_number: 17231517 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Nostoc sp. PCC 7120 # 32 401 15 384 396 97 24.0 6e-20 MNIMQQEKTMPPTPTSPASRDWLLLIGGSTYKFTLTGFYLVALVAILKNHGYSLNQLSWI HLIGGIEAAKVLFAALMERRPAGRFGRFRGWLMAATLGLSAVFGLMACTDMTQNFPLLLA CCVLLSAMSAVYGCAMLGLSCIVLPHRERGFGGVIQTMAARGGKMIGGALVLWLYQEYGQ TAAAGFMLAFTLLMLLQLLCYREPESPTAQGGLTALAVRLFSFWRQPETGWRWLVLLFAV AAPYAFAAATFVPKLADLGFSPKQTGGILAVGIPVACLIVTPLSGWFSRNYPRRKLVFLL YALQLPLLASMTAIDALARVHPWLPPAQIIALSLSYTLLLPVILALVMDKSDRATAALDS SLQFSVVLLGSYAAGFAALRLAKAVGYADAYWVAVGLAVLAGGLLYACRSLFDAGEP >gi|289656351|gb|ADEA01000016.1| GENE 26 25375 - 26400 1459 341 aa, chain + ## HITS:1 COG:NMB1527 KEGG:ns NR:ns ## COG: NMB1527 COG0859 # Protein_GI_number: 15677379 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Neisseria meningitidis MC58 # 1 336 1 336 336 575 77.0 1e-164 MSKKILIITPSWIGDCVMTQPLYRRLHELHPGCTIDAFAPKWSMAVFERMPEISRIIENP FGHGALELKKRWRIGRELGKQGYDQVIVLPGSLKSALIAFATGIKQRTGYVGESRYLLLN DIRKLDKAALPLMVDRYTALAHPTQADFNGHSDNPRFTISPESRAAALAKYGLNTDKPVL AFCPGAEYGPAKRWPARHFAELGRRYLAQGWQVWLFGSQKDFDIAEEINRLSDDLCTNLC GKTNLSEAIDLLSCADTVVCNDSGLMHLAAALDRKLVAAYGSSSPDHTPPLSPKAKIVSL HLKCSPCFKRECPLGHTDCLNKLTPDMVQKAAEELVETESE >gi|289656351|gb|ADEA01000016.1| GENE 27 26891 - 28150 1903 419 aa, chain + ## HITS:1 COG:PA4007 KEGG:ns NR:ns ## COG: PA4007 COG0014 # Protein_GI_number: 15599202 # Func_class: E Amino acid transport and metabolism # Function: Gamma-glutamyl phosphate reductase # Organism: Pseudomonas aeruginosa # 2 418 3 420 421 480 61.0 1e-135 MQNIQDYVRRTASAAKQASYIVAAAETAQKNAALLRTAELIKHHQTAILAANAQDMEQAA QKGLNDALLDRLRLTEKTIDAMCEGLRQITALPDTVGEMDEFRTRENGLQIGKMRVPLGV VGIIYESRPNVTVDAAALCLKSGNACVLRGGSEAFNSNMALSKLITQALVENGLPAAAVS LIENTDRESVGAMLQSPEFIDVVIPRGGKSLVSRIAAEARVPVIKHLDGICHVYIDRAAD AEKAVNIAFNAKTSRYGTCNTMETLLVHQSRAAEILPVLAEKYAARDVELRGCPRTLSIL PQIQTASEEDWDTEYLAPILSVKIVDSLEEAVAHINTHGSHHTDSIVTESYTDARTFLRT VDSASVMVNASTRFADGFEYGLGAEIGISTDKIHVRGPVGLHGLTSQKWIVLGDGQVRE >gi|289656351|gb|ADEA01000016.1| GENE 28 28314 - 29624 2128 436 aa, chain + ## HITS:1 COG:NMA1364 KEGG:ns NR:ns ## COG: NMA1364 COG2895 # Protein_GI_number: 15794285 # Func_class: P Inorganic ion transport and metabolism # Function: GTPases - Sulfate adenylate transferase subunit 1 # Organism: Neisseria meningitidis Z2491 # 1 425 1 427 428 496 59.0 1e-140 MTATTAPLLRFITAGSVDDGKSTLIGRLLYDSKTLLTDQLDKLNRAAENGETPDFASLTD GLAAEREQGITIDVAYRYFATPKRKFIIADTPGHEQYTRNMVTGASTADAAIVLIDATRV DFSGREPVLLPQTKRHSAILKLLGCPNIIVAVNKLDLLDFDETKYQAITDAYRKLAEQIG LQAQIHFLPISALKGDNIVNASSQTPWYQGLPLLPLLESLPVNRQNAADQATHFPVQRVA RQDGSSSDDFRGYQGRLEAGRLKTGDEIKVLPGGHTAKIAEIYNPNGKTESAEAGEVLTV ALDTDLDISRGNSIAAADSPVAPEQQFQAALCWFDDIPLNLRRKYLLKHTTQTTPVKISA ISYVWDVNTLSRVESADTLKLNDIGSVSLKTQQPIAAAPYEENHALGAFILIDEATNHTV AAGMIRGGGQSDSFEI >gi|289656351|gb|ADEA01000016.1| GENE 29 29718 - 30200 820 160 aa, chain + ## HITS:1 COG:NMA0912 KEGG:ns NR:ns ## COG: NMA0912 COG2980 # Protein_GI_number: 15793877 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rare lipoprotein B # Organism: Neisseria meningitidis Z2491 # 1 158 1 158 159 182 59.0 2e-46 MNKILLTAAVLLLGACGFHPKGMGGISHPLPYQAWHIANGQAMQQALDKALRYADGKPVG ADKAQAVLTVSRIDTRKDIYTITRAAEINEYLLILRIEAQASVNGEPLGEPITVVVNRKM DYANSDVLGKAEEEQTIWSEMRTDAAEQIVRRLTFLKAPQ >gi|289656351|gb|ADEA01000016.1| GENE 30 30201 - 31202 1882 333 aa, chain + ## HITS:1 COG:NMB0708 KEGG:ns NR:ns ## COG: NMB0708 COG1466 # Protein_GI_number: 15676606 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, delta subunit # Organism: Neisseria meningitidis MC58 # 3 332 2 331 332 492 79.0 1e-139 MASADIEQLSPDSPLKPLYVIHGEEDLLRIEALDTLRAAAKRQGYLNREVYTADNAFDWS ELLQSAGSAGLFADLKLLEIHIPGGKPGKNGGEALQSLAERLPEDTVTVVMLPKLEKAQT QAKWFGALAAKGIMLEAKAVGTAALPQWIRGRLRKLGLGIESDALTLFAERVEGNLLAAK QEIDKLALLHPQGHTVNMADAEAAVANVARFDVFQLAGAWMKGDGLRVARLLEGLEESGE EPVLLLWAVAEDIRTLIRLTAALKQGQNVQSLRNSLRLWGDKQTLAPMAAGRIHIGRLLA ALQTCAKIDRIIKGAEDGNAWSEFKRLVIGLAA >gi|289656351|gb|ADEA01000016.1| GENE 31 31353 - 31772 739 139 aa, chain + ## HITS:1 COG:no KEGG:NMC0659 NR:ns ## KEGG: NMC0659 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 139 1 139 139 222 87.0 3e-57 MDTKAKIRLGGLILLATAVLSLILVLIVDSWPIAILSAIVIMAAAAGGFVWTSRRQQRQF IERLKKFDIDPEKGRVNEANLRRMYHSGGQAQKDAVTLICLSQKCSVDEAHAMFKKRPTR QEINQMAMQQSKGRKRPHR >gi|289656351|gb|ADEA01000016.1| GENE 32 31854 - 32573 1249 239 aa, chain + ## HITS:1 COG:NMB1127 KEGG:ns NR:ns ## COG: NMB1127 COG1028 # Protein_GI_number: 15677004 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Neisseria meningitidis MC58 # 1 239 1 239 239 398 84.0 1e-111 MPTLQDKIIMVTGASQGLGEQVAKAYADAGATVILVARHQKKLEKVYDAIAASGGPEPFA ICFDLMSAEENEFAQFAAAVDEATGGRLDGIVHCASYFYSLSPLDFQTVAEWVNQYRINT VAPMGLTRAFAPMLKASPDASVIFVSESHSETPQAYWGGFGASKAALNYLCKVAADEWER FPNLRANVLIPGPINSPQRIKSHPGESRTERKNYHDILPQFVWWASEESKGRTGEIVYL >gi|289656351|gb|ADEA01000016.1| GENE 33 32672 - 34027 1881 451 aa, chain - ## HITS:1 COG:NMA1908 KEGG:ns NR:ns ## COG: NMA1908 COG2848 # Protein_GI_number: 15794794 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 1 451 1 451 451 771 98.0 0 MSIQSGEILETVKMVADQHFDVRTITIGIDLHDCISTDIDVLNQNIYNKITTVGKDLVAT AKHLSAKYGVPIVNQRISVTPIAQIAAATKADSYVSVAQTLDKAAKAIGVSFIGGFSALV QKGMSPSDEVLIRSIPEAMKTTDIVCSSINIGSTRAGINMDAVRLAGETIKRTAEITPEG FGCAKIVVFCNAVEDNPFMAGAFHGSGEADAVINVGVSGPGVVKAALENSDAVSLTEVAE VVKKTAFKITRVGELIGREASKILGIPFGILDLSLAPTPAVGDSVARILEEMGLSVCGTH GTTAALALLNDAVKKGGMMASSAVGGLSGAFIPVSEDEGMIAAAEAGVLTLDKLEAMTAV CSVGLDMIAVPGDTPAHTISGIIADEAAIGMINSKTTAVRIIPVTGKTVGDSVEFGGLLG YAPVMPVKEGSCEVFVNRGGRIPAPVQSMKN >gi|289656351|gb|ADEA01000016.1| GENE 34 34042 - 34314 452 90 aa, chain - ## HITS:1 COG:NMA1909 KEGG:ns NR:ns ## COG: NMA1909 COG3830 # Protein_GI_number: 15794795 # Func_class: T Signal transduction mechanisms # Function: ACT domain-containing protein # Organism: Neisseria meningitidis Z2491 # 1 90 1 90 90 145 96.0 2e-35 MNNSVITVIGKDRVGIVYDVSGILAENRINILNISQQLMDDFFTMIILVDTSKCPKSRQE MLDLFAEESKKLALDIRMQNEEIFQAMHRI >gi|289656351|gb|ADEA01000016.1| GENE 35 34665 - 35723 1505 352 aa, chain - ## HITS:1 COG:NMA1906 KEGG:ns NR:ns ## COG: NMA1906 COG0787 # Protein_GI_number: 15794791 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Alanine racemase # Organism: Neisseria meningitidis Z2491 # 1 352 1 352 352 621 80.0 1e-178 MRPLNARIRLDNLRHNYQTLKQIHGGKMLAVIKADAYGHGAVRCAHALSDLADGFAVATV DEAVELRESGITNPIVLLEGVFEASEYATVDKYNLWPGVGSQWQLEALIAHNWQTPVKVW LKMDSGMHRAGFFPHNYTSAYTALKQCKHVDGIVKFSHFACADEPDNGMTEMQLEAFDLA CEGLEGEESLANSAAILNVPEARRDWGRAGLALYGISPFGGVDERLKPVMRLTSRVFGER VLQPHSPVGYGATFYTSKSTRVGLIACGYADGYPRRASTNSPVAVEGKRSRIIGRVSMDM ITVELDASQEGLGAEVELWGDVVNINEVAEAAGMIPYEIFCNVKRAKFTYSE >gi|289656351|gb|ADEA01000016.1| GENE 36 35939 - 36403 739 154 aa, chain + ## HITS:1 COG:NMB1650 KEGG:ns NR:ns ## COG: NMB1650 COG1522 # Protein_GI_number: 15677499 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Neisseria meningitidis MC58 # 1 154 1 154 154 249 84.0 1e-66 MKDLDKIDLKILKLLQQNARIPMTELAEKVGLSTTPVTERVKRLERDNIISGYHARLNPH AVGQSLLVFVEIKLRSKSGNIFEDFRREVTRIPQILECHLVSGEYDYLIKVRLPDMSAYR DMLGNILLQLPAAAESRSYVVMEEVKEGLMLDLD >gi|289656351|gb|ADEA01000016.1| GENE 37 36894 - 38231 1441 445 aa, chain - ## HITS:1 COG:no KEGG:NMO_1462 NR:ns ## KEGG: NMO_1462 # Name: not_defined # Def: putative GTP-binding conserved hypothetical protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 1 444 1 443 464 617 71.0 1e-175 MQNNPLSLAVVGHTNTGKTSLLRTLLRDGAFGEVADAPSTTRHVERSAVSDGPDTLVYLY DTPGLEDAGGLLDWLESHTPSRSDGIERLQLFLDSPEAAADFNQEAKVLRQLLQSDMALY VVDAREPVLNKYKDELTVLSWCAKPVMPVFNFVGGQDLSAWTTMLARRNLHVYSGFDTVA FDFEGEIRLWDNLATMLPERTVLDRLIAMRRREWYQLDGEAKREIAGFLLDVAAYRQETE ADGASDGILQTMQAEVRQLEGQLQQRLLQIYRFYQSGVDTAEWALKAFRQDPFDRDLLVQ YGIRTGTGAATGALIGMGVDMVTLGGSLGLGAAIGGIIGGVLPNVQDISDKISGRQVLRI DAETITLLAARAMDLLDALQKRGHAAQTPVRLQKNGRTPWQPSAMPSELNKARRQWKWSS LNTRRPEVSRREREEAVESLRQKLQ >gi|289656351|gb|ADEA01000016.1| GENE 38 38257 - 39606 1354 449 aa, chain - ## HITS:1 COG:no KEGG:NMB1645 NR:ns ## KEGG: NMB1645 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis # Pathway: not_defined # 1 446 1 446 446 590 70.0 1e-167 MLNPQRQLAELVRILDEGGYIFAADPAQITESLRSVGGSYEQKLIRRAEMADRDGLLRDT LERARAGTFWLWVAAATAVFGSGFSATFLLMDSQGLNFFFILASVLGMNTVMLLVWLASV CLRLNVGRFASSPATWLRGKDPVNQAVLRLYADAWRKPSVRWRIGAASHSIWLSTLLGML VSVLLLLLVRQYTFNWESTLLTNAASVKVIDILSWLPAKFGFPAPDAEAVLKGRLNSSTA DARAWSGLLVGSIVCYGILPRLGAWLACKILLARNSERLPLDKPYYQKIIRRWQTEIVDA DNRSESVHTVSPKISISGAPKWAVMLETEWHDAAWHVHTLGQEWLDKGTADSRDAVAALI AELQRQPAQLLIGVRAHTVPDRGVLRQIVRLAEAAQGGAVVQLLLENNVSDGLKNHLTQW HDALAERGLAWLDPPRISQERRMAEQKAV >gi|289656351|gb|ADEA01000016.1| GENE 39 39756 - 40712 1499 318 aa, chain + ## HITS:1 COG:no KEGG:APJL_1729 NR:ns ## KEGG: APJL_1729 # Name: not_defined # Def: hypothetical protein # Organism: A.pleuropneumoniae_JL03 # Pathway: not_defined # 1 318 23 342 342 310 45.0 4e-83 MKRINIFFFGLGICLSGAAFAANNTDDGTWADRRHDEVHNRINRWAHEMDGWFGTPDPDK PASANLRIMLDTEWNKYDEFSVKPRVRGKVKLPVLQRKLNVVFGDDSLDDDLQQEATAYR NTPDGKNKTFDTTKTRDSNSSLALRWSDITQKHGIETDFDLGVRSGDDIYARAKAAKSWQ LDDRLYTRLEQIYRYGLDSKHHVRTNWETRYLPEGNAFIADQLYLQYEHDDKEDWTWGNS LYRQHDLSKHRYFNYGVYTGGKIENKKAKLNSYGPFTGYRQPVWRDWLFAQTELNYYNDR EKDRSHHIGALFRLEALF >gi|289656351|gb|ADEA01000016.1| GENE 40 40923 - 41744 948 273 aa, chain - ## HITS:1 COG:no KEGG:D11S_2007 NR:ns ## KEGG: D11S_2007 # Name: not_defined # Def: lipoprotein GNA1870 # Organism: A.actinomycetemcomitans # Pathway: not_defined # 6 273 4 263 263 117 32.0 5e-25 MNTNKRHFFYVIVAALTLAGCGGGSSGLSNAVTDPLAPKPNGNYKQLAIESTDTNSLLHD EKSTITITDEEKKGADKVKTYKHGDRFDISYKKQDKITGLSYERKDAEGKIDGGQLLLYK QNYSVVAGTQPTYAKNADGSARDIRQMLDINSIQGEFTRDGGVPSSGKIRYSGKAFASAD NQNGKLDYTVDYHEKSGSGTITGLKGLGDISLEKGPLRPRPDKSNGIDSTASSSELGKGR YNLTLFGPRAEEVAGSAYFEEKKQSIGFGGKQQ >gi|289656351|gb|ADEA01000016.1| GENE 41 42050 - 44305 3311 751 aa, chain - ## HITS:1 COG:NMB1622 KEGG:ns NR:ns ## COG: NMB1622 COG3256 # Protein_GI_number: 15677472 # Func_class: P Inorganic ion transport and metabolism # Function: Nitric oxide reductase large subunit # Organism: Neisseria meningitidis MC58 # 1 751 1 751 751 1279 91.0 0 MGQYKKLWFLLFAVLAVCFTILGYMGSEVYKKAPPYPEKIVSSSGQVLMTKDDILAGQSA WQTTGGMEVGSVLGHGAYQAPDWTADWLHRELVAWLDLTAQKDYGKKFDELTEEQKAVLK TRAAEEYRNQSRIQADGSVVLSDTRVKAIEEITPYYMGVYGDDPKFQSTREHFAMKNNTL PSVEARQKLFNFFFWTSWSASTNRPDENFTYTNNWPHEPLIKNVPTTENYMWSFTSVVLL LMGIGLLMWGYSFLTKHEEVQVPTEDPISKVQLTPSQKALGKYVFLTVVLFVAQALLGGL TAHYTVEGQGFYGIDAALGFEISEWFPYALTRTWHIQSAIFWIATGFLTAGLFLAPIVNG GKDPKFQRAGVNFLYIALFIVVIGSYAGNFIALTHIIPPELNFWFGHQGYEYLDLGRFWQ LLLMVGLLLWLFLMLRCTVTAFKEKGTDKNLLAIFVASMVGVGVFYAPGLFYGEKSPIAV MEYWRWWVVHLWVEGFFEVFATAAFAFIFYNMGFVRRSTATASTLAAAAIFMLGGIPGTL HHLYFSGSTSASMAIGACFSALEVVPLVLLGREAYEHWSYQHLSPWAKRLRWPLMCFVAV AFWNMIGAGVFGFLINPPISLFYIQGLNTTAVHAHAALFGVYGFLALGFVLLVARYLKPD VEFDDKLMTWAFWLLNGGLVGMIAISLLPVGAIQAYAAITEGLWYARSEQFLQMEILDTL RWVRTAADLVFIGGAVCIAWQGVKIVCSRSK >gi|289656351|gb|ADEA01000016.1| GENE 42 44348 - 44455 58 35 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRNFLYCHSNLHIFLGIYLFLSPINHATIFNIHIV >gi|289656351|gb|ADEA01000016.1| GENE 43 44688 - 45887 1197 399 aa, chain + ## HITS:1 COG:NMB1623 KEGG:ns NR:ns ## COG: NMB1623 COG2132 # Protein_GI_number: 15677473 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Putative multicopper oxidases # Organism: Neisseria meningitidis MC58 # 1 364 1 363 390 544 80.0 1e-154 MKRQTLAAIIASVFALAACGQQAAEKPAEGSAASTEAVASAADTQDSAETPSGELPVIDA VMTHAPEAPPPVNRDYPAKVIVKMETIEKVMTMADGVEYKYWTFGGDVPGQMIRVREGDT VEVHFSNHPTSTVPHNVDFHAATGTGGGAEASFTAPGHTSTFSFKTLQPGLYIYHCAVAP VGMHIANGMYGLILVEPKGGLPKVDKEFYVVQGDFYTKGKYNDKGLQDFDMDKAIKEQPE YVVFNGHVGSIAGDNALKAKAGEKIRIFVGNGGPNLVSSFHVIGEIFDTVHVEGGDLINK NIQTTIVPAGGAAIVDFKVDIPGSYTLVDHSIFRAFNKGALGQLKVEGEENPAIMTKKLS DTAYQPTDSAAAASASAPASAPAASAAPAASSEAGNASK >gi|289656351|gb|ADEA01000016.1| GENE 44 46156 - 46911 871 251 aa, chain + ## HITS:1 COG:NMB1624 KEGG:ns NR:ns ## COG: NMB1624 COG1262 # Protein_GI_number: 15677474 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis MC58 # 1 251 1 251 251 400 78.0 1e-112 MKTVKSLILAGLLICGSAVAANMAKIEGGSYRPLYLKKDTPMISVKPYQIDKYPVTNAEF SEFVQSHPQWQRGKVSSKQAEPAYLKHWVKNGSNSYAPKPSEMKHPVTNVSWFAANAYCS AQGKRLPTIDEWEFAAQASTTQKNGTGEPNYNRTILDWYADGGRKGLQNVGKNKPNYWGV YDMHGLIWEWTEDFNSSQLTSSNADSQMFCSGASIGSSDPSNYAAFLRYGIRTSLQSKYV LHNLGFRCAAK >gi|289656351|gb|ADEA01000016.1| GENE 45 47125 - 47394 443 89 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15676513|ref|NP_273653.1| 30S ribosomal protein S15 [Neisseria meningitidis MC58] # 1 89 1 89 89 175 97 1e-42 MALSVEQKAQIVKDFQRKEGDTGSSEVQIALLTFRINDLTPHFKANPKDHHSRRGLLKMV SQRRRLLAYLRRTQPDTYRALITRLGLRK >gi|289656351|gb|ADEA01000016.1| GENE 46 47607 - 48482 853 291 aa, chain - ## HITS:1 COG:NMA0880 KEGG:ns NR:ns ## COG: NMA0880 COG0777 # Protein_GI_number: 15793849 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase beta subunit # Organism: Neisseria meningitidis Z2491 # 1 288 1 287 290 540 91.0 1e-153 MSWLDKILPPKIKNRSKSEIASNVPEGLWHKCPACSATIYSTELQQNHQVCPKCNHHNPL SARERLNLLLDEGSGEEIGANVKPTDPLKFKDSKKYPDRLTAARKATGEDDALVVMKGMM NGLPVVVAAFEFRFIGGSMGSVVGERFVQGVRRAVADSCPFICVAASGGARMQEGVNSLM QMTKTSAALHLLTEKGLPFISVLTDPTMGGVSASFAFLGDVVLAEPNALIGFAGPRVIEQ TVRETLPEGFQRAEFLLEKGAIDQIVDRRSMKRRICDLITLLCRKDKVGTV >gi|289656351|gb|ADEA01000016.1| GENE 47 48585 - 49376 527 263 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149916131|ref|ZP_01904653.1| 50S ribosomal protein L25/general stress protein Ctc [Roseobacter sp. AzwK-3b] # 1 263 1 256 263 207 41 2e-52 MSRIQSTFAALGGEKALISYITAGDPDKETTLGLMHSLAANGADIIELGVPFSDPMADGP TIQRAAERALAKGVSLNDVLDIVRAFRQTDRTTPVILMGYFNPVHKMGYARFAEAAAEAG VDGVLTVDAPVENIGGLHGELKSHGIDCIFLIAPTTTEERIRSIAAVAGGFVYYVSLKGV TGAASLDTDEVSRKIEFLRKYISLPIGVGFGINNAESARKIGKMADAVIVGSRIVKEIEN NAGREAEAVGALVKELKDAVKAV >gi|289656351|gb|ADEA01000016.1| GENE 48 49488 - 49967 538 159 aa, chain - ## HITS:1 COG:NMB0730 KEGG:ns NR:ns ## COG: NMB0730 COG3030 # Protein_GI_number: 15676628 # Func_class: R General function prediction only # Function: Protein affecting phage T7 exclusion by the F plasmid # Organism: Neisseria meningitidis MC58 # 1 159 1 160 161 164 62.0 8e-41 MQFFGIGFLVLLFLEIMSVVWMADWLGGGGALFLMIVSFVGGMMMLRHTGISGLLLAGAA VRSGQEISPYQMLWPVRYAVAALLLMSPGFVSTVFALLLLLPLKGRPIADADAGNAAVFG RTAPFSRQDEGGDIIEGEYTVTSGNTQNPKQEYIEHKPD >gi|289656351|gb|ADEA01000016.1| GENE 49 50150 - 50839 873 229 aa, chain + ## HITS:1 COG:STM3038 KEGG:ns NR:ns ## COG: STM3038 COG0739 # Protein_GI_number: 16766339 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Salmonella typhimurium LT2 # 13 226 16 243 252 162 45.0 7e-40 MKTQSILTLKKFAAAAATALLLAACAGTGSGPVPDGHYRVQRGDTLYRIAKRYGQSVSTL AAWNNLRDTSQIEAGQVLRVRRNTSGSRSPSAAHATAERAVVPVNRLDMQWPVENGSSNV IQTYDGAGSKGIDIRGEQGQPIKAAAAGEVLYAGEEVRGYGKLILISHNTATITAYAHND TILVQKGQTVTAGQQIATMGSSDTDIFKLHFEVRINGKAVNPVPYLTKP >gi|289656351|gb|ADEA01000016.1| GENE 50 50928 - 51494 1002 188 aa, chain - ## HITS:1 COG:NMA1060 KEGG:ns NR:ns ## COG: NMA1060 COG0717 # Protein_GI_number: 15794009 # Func_class: F Nucleotide transport and metabolism # Function: Deoxycytidine deaminase # Organism: Neisseria meningitidis Z2491 # 1 188 1 188 188 379 97.0 1e-105 MSIKSDKWIRRMSEEHGMIDPFEPNQIKEADGRRIISYGTSSYGYDIRCANEFKIFTNIN STIVDPKNFDPKNFVTVEDDCCIIPPNSFALARTVEYFRIPRNVLTVCLGKSTYARCGII VNVTPFEPEWEGYVTLEFSNTTPLPAKIYAGEGVAQVLFFESDEVCETSYKDRSGKYMGQ TGVTLPKA >gi|289656351|gb|ADEA01000016.1| GENE 51 51557 - 51985 622 142 aa, chain - ## HITS:1 COG:NMA1061 KEGG:ns NR:ns ## COG: NMA1061 COG4642 # Protein_GI_number: 15794010 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 136 1 136 138 171 61.0 4e-43 MSKYLALPLLAAVLLQPVAAAVISPYQGSGCRYEGDVGKDGKPEGKGVWSCRDGRSYTGG FKKGRFDGKGVYTVSAGEEIFLEPFSSGSSKFRDMSLDGTFKDGFAHGKITAVKDGSPLF VMKYDRGNIVEVKLPKKAAKAK >gi|289656351|gb|ADEA01000016.1| GENE 52 52047 - 52946 1396 299 aa, chain - ## HITS:1 COG:NMB0851 KEGG:ns NR:ns ## COG: NMB0851 COG2974 # Protein_GI_number: 15676747 # Func_class: L Replication, recombination and repair # Function: DNA recombination-dependent growth factor C # Organism: Neisseria meningitidis MC58 # 1 299 1 299 299 524 87.0 1e-149 MWFKQISFYPLNKDKLPELETLADKLGESEFVRCQGLEWFSEGFAAPVPFSPELVFPADY TWRVALKKEEKVLPAGVIRDILDDKVLEIQNNDARNVGRKEKQELKEQITDDLLLRAFTR SSRTQAIFDTRRGFLLVNNAASAKAENVLTKLREALGGLEASLPNTKQSPSGLMTSWLLN GHCEGGFELDSDCELKGVGDVVPVVKVSKQDLTADEVVQHVKNGKTVTQLGLVWREQIAF VLTQDFTLKRIQYLDILQEEAETHGDDAASMTFASQILMTEAVSTMLEELVSYLGGWQD >gi|289656351|gb|ADEA01000016.1| GENE 53 53471 - 54043 951 190 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298369345|ref|ZP_06980663.1| ## NR: gi|298369345|ref|ZP_06980663.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 190 1 190 190 279 100.0 6e-74 MNANLKLVLPALLAAATLSACSVFGDKSKSESKPAPAPAEQAAAQTPQNLPEPPTVNVDS IDARKEVAYKCGEESLSVMYGMKNNEVVVAQVKYREQVTPGLFRVTANTNDQNAFWGQGI AWIAGKADASNVDKVDGNMLTLRGAQTVNGKPQLVDQIVVKGCVLDKAATAKLNKSAAAK PASKGAKGKK >gi|289656351|gb|ADEA01000016.1| GENE 54 54124 - 54330 388 68 aa, chain - ## HITS:1 COG:no KEGG:NGK_2001 NR:ns ## KEGG: NGK_2001 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 1 68 31 98 98 93 73.0 2e-18 MSEAEFSDWALKICLSGLVIFLGFIIWNLGKESKAGKFGMVMLFLVLGLGIFGFIFKNVL IEYLMVSK >gi|289656351|gb|ADEA01000016.1| GENE 55 54456 - 55622 1592 388 aa, chain - ## HITS:1 COG:NMA1808 KEGG:ns NR:ns ## COG: NMA1808 COG0626 # Protein_GI_number: 15794698 # Func_class: E Amino acid transport and metabolism # Function: Cystathionine beta-lyases/cystathionine gamma-synthases # Organism: Neisseria meningitidis Z2491 # 1 388 1 388 389 629 81.0 1e-180 MSKTLHPQTLAIRGGKEQTQYREHNQALFLTSSFMFESAQQGAALFAKEIKGFTYTRTAN PTIAAFEQRISALEGAERSVATSTGMSAIQASFFTFLKAGDHVVSSRSLFGTTAGFINNI VTKFGIEVSYVSQTDLSEWRAAVKENTKLLFLETPSNPLNEVADLEALSEIAHAAGALLV VDNSFLSPVGQQPLKHGADISVQSATKAIDGHGRVMGGVLSGSEELMTQVAMYCNSCGLA MSPFNAWVLLSGVETLSVRMEKQFAGALKIARWLSEQPQVKAVYYSGLPGHPQAALAAKQ QLGGGIVVGFEVDGKDAAWSLLDKVELFSKTANLGDVRSTITHPWTTTHGRMSPEDKQAA GIRPGLLRLAIGLEYPDDLIADLQQAMA >gi|289656351|gb|ADEA01000016.1| GENE 56 55796 - 56989 2004 397 aa, chain - ## HITS:1 COG:NMA0719 KEGG:ns NR:ns ## COG: NMA0719 COG1448 # Protein_GI_number: 15793696 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Neisseria meningitidis Z2491 # 1 397 1 397 397 785 96.0 0 MFFKHIEAAPADPILGLGEAFKAETRPEKVNLGIGVYKDASGATPIVKAVKEAEKRLLES ETTKNYLTIDGVADYNEQTQILLFGADHEIVASRRAKTAQSLGGTGALRIAAEFVKRQLN AQTVWISNPTWPNHNAIFKAVGIQDKPYRYYDAAKHGLNWDGMIEDLGQAQKGDIVLLHG CCHNPTGIDPTPEQWETLAKLSAEKGWLPLFDFAYQGFGNGLEEDAYGLRTFLKYNKELL IASSYSKNFGMYNERVGAFTLVAEDEATAARAHSQVKTIIRTLYSNPASHGANTIALVLK DADLKARWIAELDEMRGRIKAMRQKFVELLKAKGANQDFDFIIEQNGMFSFSGLTPEQVD RLKNEFAIYAVRSGRINVAGITDDNIDYLCESIVKVL >gi|289656351|gb|ADEA01000016.1| GENE 57 57154 - 58320 1679 388 aa, chain - ## HITS:1 COG:NMA1706 KEGG:ns NR:ns ## COG: NMA1706 COG1488 # Protein_GI_number: 15794599 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid phosphoribosyltransferase # Organism: Neisseria meningitidis Z2491 # 1 383 35 417 419 696 87.0 0 MLQVMLHQFPQAHSVYEFRCRNETTVYPLADIREDFERELEALCMLRFQDDELDYLRRLR FIKSDFVDYLELFQLKRRFVTHWSDEKGRLNIRIEGPMIQAMFFEIYILSIVNELYFRRL ETPEVMAEGERRLQEKAGRLKELAVQQNPADPPFLISDFGTRRRYNLAWQEHVIRTLLEA APDIVRGTSNVYLAKKLGITPIGTMAHEFLQAFQAFDSRLRDFQRAALESWVHEYRGDLG IALTDVVGMDAFLRDFDLYFAKLFDGLRHDSGDPYEWGDKAYAHYKKLKIDSRTKMLTFS DGLDIERSWALHQYFKGRFKTSFGIGTNLTNDMGHVPLNIVLKLVECNGQSVAKLSDTPG KTMTTNNTFLAYLRQVFEIPEPEPEDGR >gi|289656351|gb|ADEA01000016.1| GENE 58 58493 - 59359 1117 288 aa, chain - ## HITS:1 COG:NMB1504 KEGG:ns NR:ns ## COG: NMB1504 COG1354 # Protein_GI_number: 15677357 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis MC58 # 23 278 12 267 284 429 85.0 1e-120 MMPQPDFATGTAAPSAQPPMPSENTIAWVFGQPVTDVPQDLFIPPDALKVVLGSFQGPLD LLLYLIRKQNIDVLDIPMVKITEQYLHYIAQMEAYQFDLAAEYLLMAAVLIEIKSRLLLP RPQEAEEEEADPRAELVRRLLAYEQMKLAAQGLDALPRAGRDFAWAYLPLEIAVEAKLPE VYVADLTQAWLGILSRAKHTRSHEVVREAISVRAQMTSILRILNEKGFSRFSALFRPEQG AAYLVVNFIALLELAKEGLVRVVQPESYGEIEIHLKNEETEAAADETI >gi|289656351|gb|ADEA01000016.1| GENE 59 59356 - 60168 763 270 aa, chain - ## HITS:1 COG:NMB1501 KEGG:ns NR:ns ## COG: NMB1501 COG1179 # Protein_GI_number: 15677354 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 # Organism: Neisseria meningitidis MC58 # 1 255 1 255 258 412 83.0 1e-115 MSDTDFLFSRRFGGIARLYGDDALQRFRKAHVCVVGVGGVGSWAVEALARTGIGRLTLID LDNVAESNVNRQLHALTDDFGKPKVTALHERILQINPQCEVEEIEDFVDEDNLETLFRRP FDFVIDAIDQVRVKAAMAAYFVRSGRPFIISGGAGGQKNPALIRTADLSKVTHDPLLANL RYTLRKRYGFSRDTKEKMRVPCVYSTENITPPQSGGACAADTSPQGLSCAGYGASMLVTA TFGLYCAQAAVDAVAAGMRPSENIGKGKTR >gi|289656351|gb|ADEA01000016.1| GENE 60 60337 - 60804 743 155 aa, chain + ## HITS:1 COG:NMA1703 KEGG:ns NR:ns ## COG: NMA1703 COG0589 # Protein_GI_number: 15794596 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Neisseria meningitidis Z2491 # 1 153 1 153 154 229 88.0 2e-60 MYKHLVVAVDGSETALNALKHAADLASSVQARLSLVHVANPAEYMALAPEFLQHESYEAA AVAQGNEVLDFAEKTAAGYGVTDVVKYLLVANKGAREMAQDLVDYADENGADLLVLGTHG RTGLMHLLMGSFAETVMRQSHLPLLIIRSKAEEEA >gi|289656351|gb|ADEA01000016.1| GENE 61 60958 - 61641 815 227 aa, chain - ## HITS:1 COG:NMA1710 KEGG:ns NR:ns ## COG: NMA1710 COG1525 # Protein_GI_number: 15794603 # Func_class: L Replication, recombination and repair # Function: Micrococcal nuclease (thermonuclease) homologs # Organism: Neisseria meningitidis Z2491 # 54 227 61 233 233 181 56.0 7e-46 MFKKAAIIIALLGVLGSGQTEWLDTGLAAARKISGAVPEDLTELLSSVVRQKQPERRKSI SKQAYTGRVSSVSDGDTLHVTDSDGLKHKIRLAYIDAPELQQAYGTRSHQNLKRVADGEN VNVTVFELDRYGREVAQVRMDGEDLNLMQIRDGAAWHYNAYAAKKQKKTDYAAYAAAQEN ARQSRNGLWNGLHPQAPWDYRREQREVQNGQGGGRKKQQDKEWFNLW >gi|289656351|gb|ADEA01000016.1| GENE 62 61748 - 62419 1259 223 aa, chain - ## HITS:1 COG:NMA1711 KEGG:ns NR:ns ## COG: NMA1711 COG0120 # Protein_GI_number: 15794604 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase # Organism: Neisseria meningitidis Z2491 # 1 222 1 222 223 360 84.0 1e-99 MATQDELKRVAAEKAVEFVPENEYIGIGTGSTINIFIEALGKSGKQIKGAVSTSVKSSEL LAKYGIPEVSLSDVSGLAVYVDGADEVNRMLQMIKGGGGAHLNEKIVASASDKFVCIADE SKYVSRLGKFPLPVEVIPHARSLVSRKLVAMGGEPELRVGFTTFNGNQIVDVHGLHIDRP VSMEDEINRITGVVENGIFGHNAADVLILGTEQGAKVILPGQN >gi|289656351|gb|ADEA01000016.1| GENE 63 62486 - 62974 696 162 aa, chain - ## HITS:1 COG:NMB1512 KEGG:ns NR:ns ## COG: NMB1512 COG0245 # Protein_GI_number: 15677365 # Func_class: I Lipid transport and metabolism # Function: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase # Organism: Neisseria meningitidis MC58 # 2 156 3 157 160 270 90.0 8e-73 MNIRIGQGYDVHQLVEGRDLILGGVHIPFEKGLLGHSDADALLHALTDALLGAAGLGDIG SHFPDTAAEFKDADSRVLLREAYQSVQALGWRVVNVDTTIIAQKPKLAPHIPAMRANIAA DLGIQTACVNIKGKTNEKLGYLGRMEAIEAQVAVLLQKADTP >gi|289656351|gb|ADEA01000016.1| GENE 64 63177 - 63512 425 111 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298369356|ref|ZP_06980674.1| ## NR: gi|298369356|ref|ZP_06980674.1| hypothetical protein HMPREF9016_01026 [Neisseria sp. oral taxon 014 str. F0314] # 1 111 1 111 111 191 100.0 1e-47 MKTTFVWLKLVLLSALIAVAVFYASEQKQGWYVLLFIGATYWFVDGMEKRAGQKALAALY ADKAESYRWLQQNLSGSRIQDLKLIRRRFNLPLASAVKVLDEYLASERSAD >gi|289656351|gb|ADEA01000016.1| GENE 65 63544 - 64230 254 228 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 [Bacillus selenitireducens MLS10] # 7 227 6 225 234 102 32 9e-21 MTRRHIALIPAAGIGTRFGAGKPKQYVEINGKTVLQHTIAIFENHPAIDLIAVIVSPGDQ TFQTAPSGKTHVFRVGGASRAETVRNGVSALLAQGLAAEQDNILVHDAARCCLPPEALTR LIEEAGGQEQGGILAVPVADTLKRADGENHIGETVSRAGLWQAQTPQLFQTALLHRALSA EDLSDITDEASAVEKLGVQPLLVQGDTRNLKLTLPQDELIVRLLLQAV >gi|289656351|gb|ADEA01000016.1| GENE 66 64227 - 64949 937 240 aa, chain - ## HITS:1 COG:NMB1514 KEGG:ns NR:ns ## COG: NMB1514 COG0847 # Protein_GI_number: 15677367 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, epsilon subunit and related 3'-5' exonucleases # Organism: Neisseria meningitidis MC58 # 1 240 1 244 244 402 82.0 1e-112 MSKRQIILDTETTGLYAEGGDRLVEFAGLEMINRQMTDNNLHLYIHPERDMPEEAAKVHG LTIEVLEEKNAPPFAEVGRQIADFIRDAELIIHNAKFDIGFLNMEFRRMGLPSIEELGCT VTDTLAMAREMFPGQKASLDALCNRLSVDRSKRVLHGALIDCELLGEVYLAMTRQQFDLM GGEKEEDEEVKPVIIAETKRPAHLKVIKANAEELAAHEQYLDGLGEACLWRKAETAGAEA >gi|289656351|gb|ADEA01000016.1| GENE 67 65243 - 65719 388 158 aa, chain + ## HITS:1 COG:NMA0957 KEGG:ns NR:ns ## COG: NMA0957 COG3467 # Protein_GI_number: 15793914 # Func_class: R General function prediction only # Function: Predicted flavin-nucleotide-binding protein # Organism: Neisseria meningitidis Z2491 # 1 158 1 157 159 164 51.0 5e-41 MPESIFKQVSLDILRLHQQTVRSLLATQCCNDCEVHDAIYVTLDGRYYVWLPCMAEAKQP QTGILLIEDEDSHARLSWVASTREVKQKDSLYNRVVSALQRKMRRTKNKFNQTANARLLE LTPQQGRLTTDSKDLSLSPHDLVKALYPATHQLGEFAL >gi|289656351|gb|ADEA01000016.1| GENE 68 65869 - 66552 759 227 aa, chain + ## HITS:1 COG:NMA1508 KEGG:ns NR:ns ## COG: NMA1508 COG1187 # Protein_GI_number: 15794407 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Neisseria meningitidis Z2491 # 1 225 1 225 230 327 67.0 8e-90 MQLLKYIQAQGLGSRKQCQWLIDNGCIAVNGEIRSDAKSSIKPEEVETLAIDGEPIFAVP LPYFYILLNKPANYETSHKPQQYPSVFSLFPNHMRNIDMQAVGRLDADTTGVLLITNDGQ FNHRVTSPKHKVPKLYRVTLKHAADNRLCETLKNGVLLHDDNETVAADEAVLEKPTVLLM TITEGKYHQVKRMVAAAGNRVERLHREKFGDWSADDLPSGSWKFIRV >gi|289656351|gb|ADEA01000016.1| GENE 69 66702 - 66803 88 33 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQIKKTIYTKGKSIDGQTHYGENVLLTYSPLAG >gi|289656351|gb|ADEA01000016.1| GENE 70 67147 - 68511 1852 454 aa, chain + ## HITS:1 COG:PM0380 KEGG:ns NR:ns ## COG: PM0380 COG0733 # Protein_GI_number: 15602245 # Func_class: R General function prediction only # Function: Na+-dependent transporters of the SNF family # Organism: Pasteurella multocida # 2 453 3 454 455 612 74.0 1e-175 MSANQTRQTWSNRLTYILTVAGATVGFGATWRFPYLVGENGGGAYVFLFCIAMFVIGIPM ILVENVIGRRKGVNALDAFGGSMNGKPVAKIWKLVGWMGLIGAFGIMAYYMVLGGWVISY IVNIISGNLNISSPVSGEITKSFFTEHIENSPWEIAFYTLLFVAVNQWILVKGVIGGIEK AAKYLMPLLFLFLIAMVVRNVTLPGAMEGITFYLKPDFSKITAELFVFVLGQVFFALSLG FGVMITLSSYLDKNENLVQTAVITAITNTIIAVLAGFMIFPSLFSFGVAPNSGPTLVFQS LPIVFSNMWAGPVFAVIFFSLLLIAALTTSLTIYEVLITTIQEKTKIRRTAAITIVLAAI FIFGNIPSILSYGPWKDVSVFGKNIFDAFDYISGNILFMLTALGSALFVGFVMKDEAKDE LLYKGNHTTVNIWFAYVKYLVPLVILLIFVSNLF >gi|289656351|gb|ADEA01000016.1| GENE 71 68660 - 71104 3076 814 aa, chain + ## HITS:1 COG:NMB1314 KEGG:ns NR:ns ## COG: NMB1314 COG1674 # Protein_GI_number: 15677180 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Neisseria meningitidis MC58 # 3 813 2 811 812 1209 78.0 0 MATKPSSSKSPSPRQKNSPTKNNTRKTGVKTQPNKLSENLKAAKALQRDEAKKNRPEHVV NLINDTLWLLGLVVTAYIGISLASFDMTDPAWSHSVMPVEEVRNFGGLFGAYLSDVGYYL FGLSFWWWIAASCVFLYKNFRPLQKQENHKPYNHRIAGMALLLLLFCSPILEFFLLNNTL SDRLPVGAGGLVGAVAGTGLSWLLGKSGSLLIIAVILLLAVSLLAQVSWLEVMAKTGRNT ENMLVGLFRRLFAKKQEGVITDLPDAKNTRRMVKEAKTITAAPVPLLEGSSSNRKKSVAV SVAPPPKIQTSLFDDENLNNPPPSGEYQKPAVNLLRIPQSEPVTVNPEELQQTAELIESK LAEFGIGVQVVSATSGPVITRYEIEPAQGVKGSQIVALSKDLARSMSLQAVRIVETIAGK NTMGIELPNEKRQDVMLSEILSSPVFTEAKSKLTVALGKDISGTPVVGDLAKMPHLLVAG MTGSGKSVGVNGMIMSMLFKAKPDEVRFIMIDPKMLELSIYDGIPHLLCPVVTDMREAGQ ALNWCVAEMEKRYRLLSHAGVRNLDGFNKKIEDAKAAGKPLLNPFSLNPDEPEPLEKLPM IVVVIDELADLMMTERKAVEQQIARLAQKARAAGIHMIVATQRPSVDVVTGLIKANIPTR MAFTVQSKIDSRTILDQMGADELLKYGDSLFLQPGSAEPVRLQGAFVSDDEVHQVVNFVK AQAPADYIEGLLSGEAALETTNIVNPNAGSDELFDQAVAFILESRKTSISALQRQLRVGY NRAANLMEALENAGIVSPADAGGSRRILAQKDNA >gi|289656351|gb|ADEA01000016.1| GENE 72 71363 - 72673 2054 436 aa, chain + ## HITS:1 COG:NMB1313 KEGG:ns NR:ns ## COG: NMB1313 COG0544 # Protein_GI_number: 15677179 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) # Organism: Neisseria meningitidis MC58 # 1 436 2 437 437 674 85.0 0 MSVTVETLENLERKVIVSLAWADINAETDKRLKQTQRRVKIDGFRPGKAPLKMVASMYGA SVQNEVINELVQRAFYDIAVSENLKVAGFPRFEGVEEQDDKDSLKIAAIFEVFPEVSIGD LSASEIEKVTSEVGDAEVEKTVEILRKQRTRFNHVDRAAQNSDRVIIDFEGKIDGEPFAG GSSKNYAFVLGSGQMLPEFEAGIAGMKAGESKDVEVNFPEDYHGKDVAGKTAVFTITLNN VSEATLPEVDAEFAKALGIADGDVAKMREEVKKNVAREVERRTQEQTKESVMDALLKAVE LQVPNALVNDEATRLAEEMKQNFVNQGMANAGQVNLPADMFKEQAHRRVALGLILAKLVE ENKLEPTEEQIKAVVANFAESYEDPQEVIDWYYADANRLQGPTSLAVESNVVNFVLGKAK VTEKTLSFDEVMGAQA >gi|289656351|gb|ADEA01000016.1| GENE 73 72756 - 73376 987 206 aa, chain + ## HITS:1 COG:NMA1525 KEGG:ns NR:ns ## COG: NMA1525 COG0740 # Protein_GI_number: 15794419 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Protease subunit of ATP-dependent Clp proteases # Organism: Neisseria meningitidis Z2491 # 5 205 3 203 204 383 94.0 1e-106 MTFDFNNYLVPTVIEQSGRGERAFDIYSRLLKERIVFLVGPVDDQSANLVVAQLLFLESE NPDKDIFFYINSPGGSVSAGMSIYDTMNFIKPNVSTLCLGQAASMGAFLLSAGEKGKRFA LPNSRIMIHQPLISGGLSGQASDIEIHAKELLKLKEKLNRLLAKHCGRDLADLERDTDRD NYMSAEEAKEYGLVDQVLENRASMQA >gi|289656351|gb|ADEA01000016.1| GENE 74 73449 - 76334 2425 961 aa, chain - ## HITS:1 COG:alr7304_2 KEGG:ns NR:ns ## COG: alr7304_2 COG2931 # Protein_GI_number: 17233320 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: RTX toxins and related Ca2+-binding proteins # Organism: Nostoc sp. PCC 7120 # 28 673 387 1043 1125 241 35.0 5e-63 MEANKGNVLTKAHTVYAVSPIKEASPKTMQGTAADDVYYVTGSTDKINEAVNGGTDSVYS NVSYVLPNNVENLTLTGTQNIYGLGNNADNTLTGNDGYNRLNGGRGNDTVYGMGGEDNIS GGEGNDKLYGGEGKDSVNGDEGDDRLYGGNGDDILNGGKGNDILQGDMGEDTFVFNADSG HDTIIDNQGNNTVRFGSGIRADKISIAQTTNVSGNTDWVIKINDETSLTIRNQYLKTETE PAVNRFQFGAETYTARELALLKEGLSRPTYEEPPKNKIMGTAKDDVINGTDGRDVIDGGV GNDTLNGYAGNDELIGGDGNDTLNGGDGHDKLWGDQGQDTMRGGVGNDTYKVDDIGDTVI ENPGEGIDSVNSSISYTLPANVENLELLGEANIYGAGNNADNLLVGNAGRNRLYSGRGND IVDGGAGNDHINGGDGNDRLYGGKGDDIIYGGAGNDVLDGGTGKDRLYGGKGNDTYLFDG QTTVIDEASDRNTVRFDDKIDIGTLRLFTRAADGGGTDWIIASVRGEMTISRQFSDGLSN PVISRFEIGGKSYSAAEFQKAVSGGHYGKSLYGTSGNDTLRGTADDDYIDGGSDGRDTLY GGDGDDLIVEHSALILGVPDDKLYGGNGNDRLYADSGDDLLDGGAGNDYLEGGLHKDTYI FGRGYGHDTIFDFMFDLDDEYTPFIHTNTVKFTGGLTLDDLSISVTRGYGKEGIGYMPHL NDFVTTPRTDGDTWNISIKGTDDVLTIKNQMWMGAVSNFEFDSGSYTFNQIIQHFGLRIS HLSDDGKVIEYLDDRTIGPSSSFYEGREHIIYGTDKGDKIHIQGDYLKNTTFYGGKGNDT VEVERKTIVDAGIGDDKITFKGDSDTVVFGKGSGHDTLSIGEGIGEAGVRFSDGLSIKDL EITTGTNWTIKLKGTDDTLTILNAHTNNADSFTFASGGSYTASQLLKAVGADDVTANNGV I >gi|289656351|gb|ADEA01000016.1| GENE 75 76584 - 79421 3859 945 aa, chain - ## HITS:1 COG:NMA1897 KEGG:ns NR:ns ## COG: NMA1897 COG0532 # Protein_GI_number: 15794782 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation initiation factor 2 (IF-2; GTPase) # Organism: Neisseria meningitidis Z2491 # 1 945 1 962 962 1172 79.0 0 MSNTTVEQFAAELKRSVDDLLKQLKSAGVEKNSGSDGLTLEDKSRLRDYLQKKNGNEGGG TISVRRTRTEESTVGGVKVETRRRSRAVVIPSAEISTETAKAEAEKVKMQAAAAEAARAE AEKAAAEKAEADKAAAEKAAEEKAKAQAEAAKLKAAKEAKTGTEKAGKTEHPAKEESQPK ETRPAKQGKSAKSKETKKTTVEPEVPQPVVSAAEQAQRDEEARRAAAMRAHQEALLKEKQ ERQARREAMRQQVQQEAKAAKEGKSAEQGGVKTAESSQRPSEKAAAAGDKAAGSARMKKD DRHNRDDDNQSRNSKGKGGKGGRDRNAARGGDEERVRGGKKGKKLKLEPNQHAFQAPTEP VVHEVLVPETITVADLAHKMAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIG KPAAADDPEAFLDEGVEAVEAEALPRPPVVTVMGHVDHGKTSLLDYIRRAKVVQGEAGGI TQHIGAYHVETPRGVITFLDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIA HAKAAGVPMVVAVNKIDKEAANPERIRQELTAHEVVPDEWGGNVQFVDVSAKKGLNIDAL LEAVLLEAEVLELTAPADAPAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFG KIRAMTDENGKAINEAGPSIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDV RLAKQQAAKLENMFNNMGENQAQSLSVIIKADVQGSYEALAGSLKKLSNEEVVVNVLHSG VGGITESDVNLAIASGAFIIGFNVRADASARKLAENEDVEIRYYNIIYDAIDDVKAAMSG MLAPEQKEQVTGTVEIRQVISVSKVGNIAGCMVTDGVVKRDSHIRLIRNNVVIHTGELAS LKRFKDDVKEVRMGFECGLMLKNFNEILEGDQLECFDVIEVARSL >gi|289656351|gb|ADEA01000016.1| GENE 76 79433 - 80935 1015 500 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|17988250|ref|NP_540884.1| transcription elongation factor NusA [Brucella melitensis 16M] # 4 498 9 515 537 395 43 1e-109 MSREMLQLAEALASEKNVDTEVVFQALEFALSTAAKKKANREHMDVRVEIDRDTGEYRTF RRWLIVADEDYTYPDVEKTIEEIQEEIPGTEIQIGEYYEEQLENEGFGRQAAQTAKQIIL QRIRDAEREQILNEFLARKEDIVSGTVKRVERHGIIVEVVSGKLDALIPRDQMIPRENFR SGDRIRALLLRVDEIGSTGRKQVILSRTDKNFLAKLYAMEVPEIEDGSLEIRAVARDPGQ RAKVAVKANDQRIDPQGTCIGVRGSRVNAVSNELSGERIDVVLWSPETAQFVINALSPAE VTRIVIDEDKHAVDVVVAEDQLALAIGRGGQNVRLASDLTEWQLNIMTVAEADERNEAED EAIRKLFTEHLNIDEETADILLQEGFATLEEVAYVPAAELLEIDGFDEEIVEVLRNRARD AILTLAIASEEKLEDVADDLRSLEGLDTEMLRDLAQAGIITRDDLAELAVDELIEITGVT EEEAKKVILAAREHWFTESN >gi|289656351|gb|ADEA01000016.1| GENE 77 80966 - 81397 439 143 aa, chain - ## HITS:1 COG:NMA1895 KEGG:ns NR:ns ## COG: NMA1895 COG0779 # Protein_GI_number: 15794780 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 143 7 149 149 246 86.0 1e-65 MDIQNILDKTLPGLGYELVDFELTAQGDLRIFIDKEGGITVEDCATVSNHLSRVFTVEDI DYKRLEISSPGLDRPLKKAADFVRFAGRQAKIKTRLPIDGQKNFIGRIENCKNGTVSISF DGKSVDIEFDNIDKARLRPEFNF >gi|289656351|gb|ADEA01000016.1| GENE 78 81627 - 82733 1313 368 aa, chain + ## HITS:1 COG:NMA1894 KEGG:ns NR:ns ## COG: NMA1894 COG1932 # Protein_GI_number: 15794779 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoserine aminotransferase # Organism: Neisseria meningitidis Z2491 # 1 368 1 368 368 627 80.0 1e-179 MPAHTIYNFSAGPAVLPEAVLRTAQQEMLDYNGTGFPVMAMSHRSDMFLSILHHAEHDLR QLLNIPSHYKVLFLQGGATTQFNMVAMNLARGFKRADAVVTGNWSRIAYEQMSRLTDAEI HLAADGGEQFGYTALPAVESWDVDKHSAFVHFVINETVHGLQYQSVPKLSDGLPPLVCDM SSEILSREFDVNDYGLIYAGAQKNIGPAGATVVIIREDLLERCPKDIPDVFNYQSHIKRN GMYNTPATYPIYMAGLVFRWLLTQGGVKKIESVNNLKAETLYRAIDGSGGFYINNIQADA RSKMNVIFKTSDPDLDDTFVREAELRGLCALKGYKLLGGMRASIYNAMPLEGVEALAAFM QDFQRRYG >gi|289656351|gb|ADEA01000016.1| GENE 79 82863 - 83420 705 185 aa, chain + ## HITS:1 COG:NMA1891 KEGG:ns NR:ns ## COG: NMA1891 COG0778 # Protein_GI_number: 15794777 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Neisseria meningitidis Z2491 # 1 185 1 185 185 295 74.0 3e-80 MDALHLLTTRRSSKNLTAPAPNAEQIEQMLQAATQVPDHGNMRPFRFTVIESEDGLSYFR KLLTQTVTECNFGEDSMKKAEKVGNMAPLVIGVTFSPNCSSPKPKPEWEQMLSAGCSAYA LQLAASAQGFDNVWITGLWVNSPQLREAFDCSDREKIIGLIMIGTSAEETAGPKNTDLDE FVTHW >gi|289656351|gb|ADEA01000016.1| GENE 80 83695 - 84576 911 293 aa, chain - ## HITS:1 COG:MA1840 KEGG:ns NR:ns ## COG: MA1840 COG0524 # Protein_GI_number: 20090690 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Methanosarcina acetivorans str.C2A # 1 282 29 315 326 154 34.0 2e-37 MKVTCFGEVLWDDFPTGKVLGGAPLNVAVRLESLGVGGSIISCRGDDADGEELLRQIKGK NVNTDLLQVSPDQATSLVKVKLNECGSASYEIVYPCAWDRIQLQEEALQRVAESDAFIFG SLATRDEVSRSTLDKLIEKAKFKIFDVNLRKPFYDTDRLLDTMKKVDLVKLNDDELYELS EIYGSPYHSIEQNIAFLAKLAGVPNICVTLGGHGAVLYQKGKLHRHCGFRVKVADTVGSG DSFLGGLTYKLLNNSEPQEALTFACALGALVAARRGATPDISLQEIENFMNPA >gi|289656351|gb|ADEA01000016.1| GENE 81 84576 - 85901 1232 441 aa, chain - ## HITS:1 COG:BS_ywtG KEGG:ns NR:ns ## COG: BS_ywtG COG0477 # Protein_GI_number: 16080636 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Bacillus subtilis # 14 436 14 439 457 248 36.0 2e-65 MNQSKLLIWSITVALAGFLFGFDTVVISGADQALQHLWNSSSLFHGWVVMASALWGTVIG ALFGSIPTDKFGRKKTLIAIGILYVVGSLGSALVHDPYSFACFRFIGGLGVGASTIAAPA YVTEISPADKRGRLVAMYQFNIVFGILIAYLSNFIFSNLDLGANTWRWMLGVQVVPAAIY TLMVLGIPMSPRWLVMKGRIEDARKVLAVINPEADINELVASAQKDGGKKESLLLKKYRL PVLLAFLIAFFNQMSGINAFLYYAPRIFEIAGLEKSSALLSSVGIGVVNLIFTFVGLSLI DKFGRRQLMYIGSFGYIVSLGLVSLSFFLGWKGMMVPLFFFLFIAAHAVGQGTVIWVFIS EIFPSHLRAQGQALGSSTHWVLAAAIPAAIPYLFDEIGASWVFACFTAMMVLQLVFVMFM MPETKGVPLEELSKSLIKEES >gi|289656351|gb|ADEA01000016.1| GENE 82 86469 - 86792 353 107 aa, chain - ## HITS:1 COG:no KEGG:NMO_0620 NR:ns ## KEGG: NMO_0620 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 1 105 1 101 102 124 59.0 8e-28 MTNNVNRPAVPAKRYFTLDEVCELVQISPSQFAQWQHENGAVIGYGGNRYTRLDVVKLLK LKDTFAPFVDSFNHNALDSEGNPAADAKEVRAELETILADLEKTLAN >gi|289656351|gb|ADEA01000016.1| GENE 83 86776 - 87078 269 100 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148826992|ref|YP_001291745.1| 50S ribosomal protein L35 [Haemophilus influenzae PittGG] # 2 93 3 93 96 108 56 2e-22 MTLTKAELADILVDKVSNVTKNDAKEIVELFFEEIRSTLARGEEIKISGFGNFQLRDKPQ RPGRNPKTGEEVPITARRVVTFHASQKLKGMVEHYYDKQR >gi|289656351|gb|ADEA01000016.1| GENE 84 87152 - 89515 2224 787 aa, chain - ## HITS:1 COG:NMB0728_2 KEGG:ns NR:ns ## COG: NMB0728_2 COG0072 # Protein_GI_number: 15676626 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase beta subunit # Organism: Neisseria meningitidis MC58 # 147 787 2 642 642 1215 94.0 0 MQFSYSWLKTQADTELSADKLEHLLTMSGLEVEEAETAAPAFTGVVIAEVKSVEKHPDAD RLNVTQVDAGTGELVQIVCGAPNVKAGIKVPCSLPGAVLPGSFKIKPTKMRGVVSNGMLC STDELGLPDDGVNGLHILPQDAPVGANIREYLDLDDTVFTLKITPNRADCLSIKGIAREV SALTGCAFKQPAIHAAPITGSRKQPVQIDAPADCGRFISRVIENVNARAATPDWMKQRLE RSGIRSISALVDIGNYVMLEIGQPMHVFDADKLSGSLHIRRAREGETLECLNEKTVSLSE NTLVVADEKGALSLAGLMGGAASAVSDDTQNIVLEAAWFAPEIIAGKSRQYGFGSDSSFR FERGVDYRLQADAIERATELVLQICGGAAGEMVEALGRLPENKQVELRLGRLKTVLGVDI PAEQVETILQHLGLQPEKTAEGFRVTAPSFRFDIEIEADLIEEIGRVYGYENIPDDYTSG RLKMLALPETRRPRFAVYNEMAARGYREVVSYAFVDEQWEHDFAANANPIRLQNPLAAQY AVMRSTLIGGLVEILQNNLNRKQNRVRVFEIARVFSKGSDGQFVQNERIGGLWYGAAMPE QWGKKTRNADFYDIKADVENLLKNKAVEFVKTEHPALHPGRAANIVSDGQIIGFVGELHP KWLQKYDLPQAPLVFEIDMAAVLEREKTRYQAVSKFQPVRRDLAFVMSETMTHDDLLAAL NGAANKLVQEISVFDVYRGTGLPEGMKSMAVKVILQDMENTLTDETVEPVIGKLIDAATA AGAQLRS >gi|289656351|gb|ADEA01000016.1| GENE 85 89548 - 90549 369 333 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298369377|ref|ZP_06980695.1| ## NR: gi|298369377|ref|ZP_06980695.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 333 1 333 333 669 100.0 0 MEDVSVKCIRGIEVSSEPDFSHFSQEIADGFYRPVYRLLYNALPSQGKLMELDADDFKDE IIDLYAKMSKSEQSALRKFCSVEIPRYDNNPYQKLIWIFVAEFPVFGLVLKHIHLKAEIT LKVIALLVGEEVDSENFIRFKTEIDDLNRLAWVRRQTESESQSGVSNLGTISEMLLERAL ADLIDGIHFFKTNNPEIQSYGDFVLMCLPNNLWLSVKSNFARERLLASGYTTDILGVGFF TDYKEFTSKAKIRNFQRVGFLAMYLPDIPVSLKQQENKTNTYNQIFEFYSKNNREMPKNI NGTDFLRPLSRLYGDIKSLLSETDVRHRTTLQF >gi|289656351|gb|ADEA01000016.1| GENE 86 90626 - 91699 345 357 aa, chain + ## HITS:1 COG:NMA1500 KEGG:ns NR:ns ## COG: NMA1500 COG0270 # Protein_GI_number: 15794400 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Neisseria meningitidis Z2491 # 44 354 14 331 337 287 50.0 3e-77 MKQIHIKLNDELHQKLSTYCKLNHLSIQDFVESQLFSSLYKSQTPQNAPFRFIDLFAGIG GIRLPFEELGGQCVFSSEIDKFAKTTYQAFYGDVPHGDITQIAPSEIPDFDLLLAGFPCQ PFSQAGLKKGFTDTRGTMFFHIEEIIRQKHPKAFLLENVKGLKGHDKGRTFQTIYDSLTA LGYTVNAKVMAAKDFNLPQNRERIYIVGFRSAKDAAQFEFPHPLPKTVKVGDILESFPDA KYTISDRLWQGHLRRKAEHKQKGNGFGYGLFNAQSEYTNTISARYYKDGSEILIEQENTN PRKLTPLEAARLQGFPDEIVLKARKRGVSDVQLYKQFGNSVAVNVIRSIAQKIVPLL >gi|289656351|gb|ADEA01000016.1| GENE 87 91694 - 92113 177 139 aa, chain - ## HITS:1 COG:SMc03764 KEGG:ns NR:ns ## COG: SMc03764 COG3727 # Protein_GI_number: 15966902 # Func_class: L Replication, recombination and repair # Function: DNA G:T-mismatch repair endonuclease # Organism: Sinorhizobium meliloti # 1 119 2 120 145 89 38.0 2e-18 MDRLTPEQRKKCMQSNKSKGTKPELVLAKAMWALGLRYRKNSGSIFGKPDFSFKKYKVAV FVDGEFWHGKDWEQRKAEIKGNREFWIAKIERNIRRDIEVTDRLKAEGWEVFRFWGKDVV KNPQRYAQQIADSLNRKKL >gi|289656351|gb|ADEA01000016.1| GENE 88 92170 - 93162 1330 330 aa, chain - ## HITS:1 COG:NMA0933 KEGG:ns NR:ns ## COG: NMA0933 COG0016 # Protein_GI_number: 15793892 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase alpha subunit # Organism: Neisseria meningitidis Z2491 # 1 330 1 330 330 658 96.0 0 MENVNRIVAEGIAAVEAAQDFNALEQIKARYLGKTGELTGLLKTLGQMSPEERKTIGAHI NECKNQFQTAFNNKRDALNEAKLQAQLAAEALDITLPGRAQENGGLHPVTLTLQRVVELF HGMGFEVADGPEIEDDFHNFQALNIPANHPARAMQDTFYVENGDVLRTHTSPIQIRYMLD KKEPPIRIIAPGRVYRVDSDATHSPMFHQAEGLWVEEGVTFADLKAVFTDFIRRFFERDD LQVRFRPSFFPFTEPSAEIDIMGENGKWLEVGGCGMVHPNVLRNVNVDPEKYTGFAFGIG LDRFAMLRYNVNDLRLFFDNDLNFLKQFAE >gi|289656351|gb|ADEA01000016.1| GENE 89 93410 - 93769 585 119 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|59800746|ref|YP_207458.1| 50S ribosomal protein L20 [Neisseria gonorrhoeae FA 1090] # 1 119 1 119 119 229 99 4e-59 MPRVKRGVTAHARHQKIFALAKGYRGRRKNVYRVAKQAVMKAGQYAYRDRRQRKRQFRQL WIVRINAGARENGLSYSKFMNGLKRASIEIDRKVLADLAVFDKAAFAQLVEKAKAALAA >gi|289656351|gb|ADEA01000016.1| GENE 90 93782 - 94060 450 92 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|194098022|ref|YP_002001070.1| putative 50S ribosomal protein L35 [Neisseria gonorrhoeae NCCP11945] # 1 92 1 92 92 177 93 2e-43 MAFWAQVFETNVLKPPDALSNNEWSFPMPKMKTKSSAKKRFKVLGNGGVKRAHAFKRHIL TKKTTKNKRQLRGTSMVNDRDLASVAKMLPYA >gi|289656351|gb|ADEA01000016.1| GENE 91 94126 - 94599 563 157 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167856598|ref|ZP_02479300.1| 50S ribosomal protein L35 [Haemophilus parasuis 29755] # 1 157 2 159 159 221 65 1e-56 KEVRLISESGEQLGVVSVREALAMAEEQDVDLVEISPTAKPPVCKLMDYGKYKYQQAKKR DEAKKNQKQVQIKEIKFRPGTDEGDYQIKMRNINRFLADGDKVKVTLRFRGREMAHQQLG AQLLERVKEDLAEVAQIESFPKMEGRQMVMMIAPKKK >gi|289656351|gb|ADEA01000016.1| GENE 92 94666 - 96579 1315 637 aa, chain - ## HITS:1 COG:NMB0720 KEGG:ns NR:ns ## COG: NMB0720 COG0441 # Protein_GI_number: 15676618 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Threonyl-tRNA synthetase # Organism: Neisseria meningitidis MC58 # 1 635 1 635 637 1234 91.0 0 MLNITLPDGSVRQYEAPVTVAQIAASIGSGLAKATVAGKVNGKLVDASDPIGKDASVQII TPKDKEGVEIIRHSCAHLIGHAVKQLYPNAKMVIGPVIEDGFYYDIATDKPFTPDDVAAI EARMKELINQDYDVVKIMTPRAETIKTFQERGEEYKLRLIDDMPEVEEMGLYHHQEYVDM CRGPHVPNTRFLKNFKLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKAYIQRIEEAEK RDHRKLGKQLDLFHLQDEAPGMVFWHPRGWALWQTIEQHMRKELDAAGYREVKTPQIMDK AFWEKSGHWDNYKDNMFVTQSEKREYAVKPMNCPGHVQIFNNSLRSYRDLPMRLAEFGSC HRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVDEARRFNELLVRIYKQFGFHDVAVKLS LRPEKRAGSDDIWDKAEQGLRDALTACGVEWEELPGEGAFYGPKIEYHVKDAIGRSWQCG TLQLDFVLPDRLDAEYVTESNGRARPVMLHRAILGSLERFIGILIENHAGSFPLWLAPVQ MVVMNITEHQTDYCRQVVERLQAENFRVELDLRNEKIGYKIRDNSQYRFPYQIVVGDKEK QENKVAVRRKAEDLGSLNIDDFISQLKQEIAESLVIS >gi|289656351|gb|ADEA01000016.1| GENE 93 96937 - 97128 124 63 aa, chain - ## HITS:1 COG:RSp0434 KEGG:ns NR:ns ## COG: RSp0434 COG0583 # Protein_GI_number: 17548655 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Ralstonia solanacearum # 1 62 239 304 304 59 46.0 2e-09 MDGGGIALVRSLLVSDDLKAGRLSDISIPSPLAYYLVYRAESCNLPQVCAFRERMKVEWQ EGY >gi|289656351|gb|ADEA01000016.1| GENE 94 97556 - 100039 4058 827 aa, chain - ## HITS:1 COG:YPO3938 KEGG:ns NR:ns ## COG: YPO3938 COG0058 # Protein_GI_number: 16124066 # Func_class: G Carbohydrate transport and metabolism # Function: Glucan phosphorylase # Organism: Yersinia pestis # 9 817 3 813 815 989 59.0 0 MAKKKQPISGFEYVMPKPDAETIRKSIVYKLIFILGVDPNDATEHQWLNAAMLAARDLIA EDFLKTRRAHIDNGKRMVYYLSMEFLLGRAFVNALINEGVYAEFAEAFKQLGKEFANICE QEQDPGLGNGGLGRLAACFLDSLATLRIPAMGYGIRYQYGMFKQEIVDGQQVEKPDLWLD QDLAWQIGRPSKQYAVSFGGQVINMGDKKEWHPSEEISAMAYDEIIPGYGGDVANPLRLW TAHAGNRFDLADFNRGDYASAVRAQNSDENISRVLYPNDSTDSGRELRLKQEYFLVSASV QDIVARHKCRFPSIKNLADKVAIHLNDTHPVLAIPELMRILIDEEGIAWTEAWNMCCKIF SYTNHTLMSEALETWPVDLMGRLLPRHLDIIFEINAYFLNALRAIGNFDDDFVRRVSIID ENNGRRVRMAWLAVIGSHKVNGVAKIHSDLMTTSIFADFAKVFPERFTNVTNGVTPRRWI NIANPPLTAFLDKHLGEDDWRLHLDNLTRLNEKVDDTRIQNEFAKVKKAAKTRLARYIEN ELGIKVSTDALFDVQIKRIHEYKRQALNVMHIVDRYNKILENPDFDWQPRVFVFSGKAAS AYYMAKKIIRLINDVAKIINNDERIRDLIKVVYIPNYSVSLAEIIIPAADLHEQISLAGT EASGTSNMKFALNGALCMGTLDGANVEILEKVGADNCFIFGNTVEQVEEIRRNGYDPLGY IERDNDLRRVVNQISNGTFSPEEPNRYNDVLQPYGDYYQLMADFRSYIDTQYRADEHYRN AKKWRRSALINIANMGFFSSDRSIADYCRDIWFIKPLTEKELPSSDV >gi|289656351|gb|ADEA01000016.1| GENE 95 100295 - 102277 2297 660 aa, chain - ## HITS:1 COG:HI1358 KEGG:ns NR:ns ## COG: HI1358 COG1523 # Protein_GI_number: 16273268 # Func_class: G Carbohydrate transport and metabolism # Function: Type II secretory pathway, pullulanase PulA and related glycosidases # Organism: Haemophilus influenzae # 11 630 8 631 659 652 52.0 0 MTAATWHIEEGVPYPMGATLTNEGVNFTLFSINAEKVELCLFDGDVETRLTLPDRVGSVF YGFVPGVRAGQRYGFRVYGRENAARGSCFNPQKLLIDPYSKKIDGKPVYRNEEELAWFHH TDERDNAHIAPKSIVAGKSRFNWGNDKHPNTPWGRTVLYEAHVKGLTKQFPHLKHKGTYQ ALSDPRLVDYLKKLGITAVELLPIHQHLDEYHLQRQGLSNYWGYNTYSHFAVEPSYAVNP ANAEDELKKAVRTLHKAGIEVILDVVYNHTAEQDGQGPMLCQRGIDNTLWYWLNGDGYYE NWSGCGNTLNIVRRDVTRWAADSLRYWVEEFHVDGFRFDLGTVLGREPDFQAYGRFFQVV YQDPVLASRKLIVEAWDIGEGGYHLGNFPQPFAEWNGRFRDDMRAFWVWESGSLGAFAER LAGSSDIFCHSGRRPSASINFITAHDGFTLHDLVSYNEKHNVANGEENRDGHNENISYNH GVEGETYDIHVLNDREYTAKALLASLLMANGTPMLLAGDEFGNSQGGNNNGYCQDNSISW LDWPDKRHGLQTYVQELIAVRNRIRLLNEDQWWNEQRVQWLSSDGLAMGETCWHNRGIKA MQVLIDGEWLLLVNAKRSQQLFNLPQGQWEMSCVPSKKFNYNSAKCTVEHMGIWILHKKG >gi|289656351|gb|ADEA01000016.1| GENE 96 102412 - 106737 5177 1441 aa, chain - ## HITS:1 COG:HI1357 KEGG:ns NR:ns ## COG: HI1357 COG0296 # Protein_GI_number: 16273267 # Func_class: G Carbohydrate transport and metabolism # Function: 1,4-alpha-glucan branching enzyme # Organism: Haemophilus influenzae # 715 1426 10 725 730 992 64.0 0 MNDNVLTERAAGLGIDAGFYDINGMYHVTKPEVMEAIVHTLQQNHVSDGLFSDGLYDDTV ALHEFRQERVSVPAGFLDAQAVMVRTEGGETLPARLCEENGSAWVLLPELPCGYHNLSVY GDGKSYQVMLIVAPDTVYRPAGLSDGLRMNGLTVQLYGLRSQRNWGIGDFTDLAQLMEYA GGRGLEFVGINPLHALFTSQPAFASPYSPSSRSRLNPVYLDVEQVGAFSYSEKARKWLNR SALKKRLAALRLTDTVAYASVWELKRDALQIAFDAFEQDGSAQAQLDRAAFQDFVAREGS DLYGFGLFEALDQYYGKTDAVGWTVWPEEFRDPYSKAVQNFAKSHGREIHFYMWLQWLCA EQLAKVNEAAERNGVKLGIYGDLAVGAARSGADTWLDRGSYCMDMSVGAPPDPMGPTGQN WGLPPLNPQALKRAGYRKFVEILRKNMHLYGVLRIDHVMALCRLWWVVGDKTADFGAYVH YDAPVMFAILALESHRNRCVVIGEDLGTVPDEARHLLNHYKVFSYKVMYFSKNQDGFELP EHYPVQSVTVISTHDVAPLAGYWTGRDLEIMHRLGTLPDDAAFQTASEQRKRDKADLFAK LKQTGCLPQQAEMPSEMTEELLDAVHRYGALSSSRLYAVQLENLLGVTENLNVPGVAEGY PNWACRLPVALEDFPNHRLMAGQLAMIDEVRMKTNSKIKAAKAYHELDQAERDTIDSLFS ATHGDPFAYLGRHRLAEGGEVVRTLIPGAFSVDIVNRETGELIGPSEKIDDRGFFVAVLP DSSPDYALSIRYNEDAEAVREEDPYRFGTALQDMDLWLLAEGRHLRPYEALGAHFAELDG VKGVSFAVWAPNAQRVSVVGEFNYWDGRRHVMRFHRDNGIWDIFIPAVKLNALYKFEIRD ANGNVREKADPYAFGAELRPTTASVVRGLPDKVEEPAFRAQANAIDSPISIYEVHLGSWK RNPENNYWLTYEQLATELVSYVKEMGFTHIELLPVSEYPFDGSWGYQATGLYAPTSRFGS PEELRHLIKAAHDAGIGVILDWVVGHFPTDDHGLNHFDGTALYEHADPREGYHQDWNTLI YNFGRTEVKNFLQGNALYWIERFGFDGLRVDAVASMVYRDYSRKQGEWIPNQYGGNENLE AVAFLRDTNTMLKNEVPSATEVAEESTSFANVTRQEGLNFSYKWNMGWMNDTLHYMMEDP INRKYHHNKMTFGMMYQYSENFVLPLSHDEVVHGKRSLLGRMPGDCWQQFANLRAYYGFM YGYPGKKLLFMGSEFAQGREWNYNEGLDWFLLDQEGGWHRGMQDYVRELNHVYKDTAPLY QLDQWPEGFEWLVADDGDNSVFVFERRDREGNRVIVISNFTPVVRENYRFGVNQAGVYRE IMNSDNTAYKGSGVSGGEEIRTDEIGSHGRAQSLSLTIPPLATVYLYKEADKAAVEEQSG E >gi|289656351|gb|ADEA01000016.1| GENE 97 107046 - 107525 661 159 aa, chain - ## HITS:1 COG:NMA1722 KEGG:ns NR:ns ## COG: NMA1722 COG1047 # Protein_GI_number: 15794615 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerases 2 # Organism: Neisseria meningitidis Z2491 # 1 147 1 147 160 237 86.0 7e-63 MAIAKNSAVSLHYEMFDTDNQLLDKTEEPIVYLHGGYDGIFPLVEEALHGKEVGDTVDVV LSPDDAFGEHDPELVRVEDVSVFPVEVEAGMMFEADDPATGDVIIYRVTDVADGKAVVDG NHPLAGMKIRFKATVDSIRDATDEEIAHGHIHGPHGHHH >gi|289656351|gb|ADEA01000016.1| GENE 98 108060 - 108347 244 95 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKSLFAAALLSLALAACGGADKAADTAASAASNAMDAAASAADAAASAADSATDAAASA ATGAADTAASAAASAADAAASAADSAASAASGAAK >gi|289656351|gb|ADEA01000016.1| GENE 99 108439 - 109812 2017 457 aa, chain + ## HITS:1 COG:NMA1724 KEGG:ns NR:ns ## COG: NMA1724 COG0277 # Protein_GI_number: 15794617 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Neisseria meningitidis Z2491 # 4 457 2 455 455 729 76.0 0 MTHPDLYTQLRLFLDGNEITEPSPDLLTDQRRRFTSSPDIVLQPRSVESVQNIMRFCFKH KIPVTPQGGNTGLCGAAVAENGVLLNLSKLNRIREINLADNSITVDAGAVLQNVQQAAAE AGRLFPLSLASQGSCEIGGNIACNAGGLNVLRYGTMRDLVLGLETVLPDGSLVSHLHPLH KNTTGYDLRHLFIGSEGTLGVITGASLKLFALPQTTATAWVGLPDIESAVRLLTLIQGHF AERLCSFELISRFALELSSGFSNIQKPVEAEWHILLELTDSVPDPELADRLAEFLFERGL ENSVLAQSEQERNDLWALRENISASQRSLGTSIKHDIALPIARVAAFVRRCAPALKARFA DIEIVCFGHLGDGSLHYNTFLPEIMSNDVYEYEDIINTIVYENVLQDNGTIAAEHGIGTI KKHWLPRVRTESELALMRAVKAHLDPYNIMNPGKLLP >gi|289656351|gb|ADEA01000016.1| GENE 100 109982 - 111865 2914 627 aa, chain + ## HITS:1 COG:NMA0207 KEGG:ns NR:ns ## COG: NMA0207 COG1297 # Protein_GI_number: 15793232 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis Z2491 # 13 627 12 672 672 796 74.0 0 MPQLHTRDPYAGWRELTLRGMILGALITVVFTASNVYLGLKVGLTFATSIPAAVISMAVL KFFKGSNILENNMVQTQASAAGTLSTIIFVLPGLLMAGYWNGFPFWQTTLLCVSGGILGV IFTVPLRYAMVVKSSLPYPEGVAAAEILKVGSGEHEDAEQGQSGDSGVREILSGGLLAGL MSFLSGGLRVISDSASYWFKAGNAIFQLPMGFSLALLGAGYLVGLTGGIAILVGIFIAWG GAVPYFSNIIPQPSDMDMTASAERTEQDLSPKSMILIVLGMMLLLGFSFYHFIAAAQMSA GIAWTLVVVCTLLTSVIGFLVAAACGYMAGLVGSSASPISGIGIVSIVVISLVLLAVGES SGLFADEGNRQFMLALTLFCGSAVICVASISNDNLQDLKTGYLVKATPRLQQIALIIGCV AGAIVVSPVLELLYEAYGFTGAMPRAGMDASQALAAPQATLMTTITQGIFAHNLQWNYIF TGVGIGVALIIVDFILKKSSGNRLALPVLAVGMGIYLPPSVNMPIVVGAFLAAWLKSRIR TRSGDAENSLKRADRTGTLFAAGLIVGESLIGVAMAFVIAVSVTNGGSDAPLALGLKNWD TAASWLGLAGFLLGMTVFARRILKAAR >gi|289656351|gb|ADEA01000016.1| GENE 101 111978 - 112487 437 169 aa, chain - ## HITS:1 COG:RSc0662 KEGG:ns NR:ns ## COG: RSc0662 COG3762 # Protein_GI_number: 17545381 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Ralstonia solanacearum # 7 164 11 168 173 112 37.0 2e-25 MEQNRFKRLWRHWLSPRRRVERHFPTSDLQRLSREIGASEQNHRGQVRFVIESHYPASAI WNRVGPRTRALQWFGELGVWDTEENSGVLVYVSFADRVIEIVADRGIAAKIDQSRWQDIC DTMRRHFLNGDYVNGLEQGLRETDRLLVQHFPRFQTASTDELPNDVVLK >gi|289656351|gb|ADEA01000016.1| GENE 102 112487 - 113383 1002 298 aa, chain - ## HITS:1 COG:PA0536 KEGG:ns NR:ns ## COG: PA0536 COG1512 # Protein_GI_number: 15595733 # Func_class: R General function prediction only # Function: Beta-propeller domains of methanol dehydrogenase type # Organism: Pseudomonas aeruginosa # 25 178 19 172 341 116 40.0 6e-26 MLLPAIQRLGAFLAVLFACVRLFAADLTPVPKLTDPVMDTAQMLQPEEREELNGHLLQYS REKGSQIAVLTVPAISPETPFDYSARVMEEWKLGRKDVSDGVLLLLVRDERKTHLAVGRG LEGAIPDVYAKRILQDVLSPYLREGKTGEGVAAAVAQIEKLIAGEKLPEASTQSDAADDR MGNLLVLLVVLFFIGAFLKMCFGPTIGSLLTGSSSFGAALMLGLGVQAGLVAGLIMTVLA LIGFSGLFKIAEIFISDGGGDGGGWHSGGGGGGWHGGGGGGFSGGGGSFGGGGASGGW >gi|289656351|gb|ADEA01000016.1| GENE 103 113447 - 114037 930 196 aa, chain - ## HITS:1 COG:PA0537 KEGG:ns NR:ns ## COG: PA0537 COG1704 # Protein_GI_number: 15595734 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Pseudomonas aeruginosa # 19 196 18 195 202 243 70.0 2e-64 MLKKILAVLTVFSSLFVLSGCGYNTMQEQDEAANAAWSEVLNQYQRRADLIPNLVNTVKG YAKHEDEVLTKVTEARSKVGSIQMTAEDATDPEKLKRFQQAQGELSSALSRLLVVSENYP QLKADQSFRDLQAQLEGTENRITLARNNYIKSVQTYNTTIRRFPDNLTAKMFGLKQRANF SVENESAVSTAPKVSF >gi|289656351|gb|ADEA01000016.1| GENE 104 114315 - 114494 285 59 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298369397|ref|ZP_06980715.1| ## NR: gi|298369397|ref|ZP_06980715.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 59 1 59 59 82 100.0 6e-15 MLKCREACKLLSEAQDRKLTPRERLSLKLHLFVCIHCRRYRKQLAFLRANLKKWQQKLP >gi|289656351|gb|ADEA01000016.1| GENE 105 114507 - 115097 808 196 aa, chain - ## HITS:1 COG:NMB2144 KEGG:ns NR:ns ## COG: NMB2144 COG1595 # Protein_GI_number: 15677957 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Neisseria meningitidis MC58 # 17 195 15 192 195 147 42.0 1e-35 MTSFGKETFGSLLSALRPAILRFAAVQLRDEALAEDIVQETLAAAWDKQRQFRGEAGLKT WVMAILKNKITDHFRRSRHSGISLEGLQRENEAIDEAWRACFDADGHWLDSASPAQWRPP EDYAEQQDFFRTLENCLGGLPEDTARIFYLREIMGMEVDEICGRFDISKDNCYVILHRAR NGLRRCLQLRWFDSDA >gi|289656351|gb|ADEA01000016.1| GENE 106 115197 - 116102 875 301 aa, chain - ## HITS:1 COG:NMB0702_2 KEGG:ns NR:ns ## COG: NMB0702_2 COG2333 # Protein_GI_number: 15676600 # Func_class: R General function prediction only # Function: Predicted hydrolase (metallo-beta-lactamase superfamily) # Organism: Neisseria meningitidis MC58 # 48 300 1 251 251 330 69.0 1e-90 AAVAAAPLPLAVLAAVAALLALLPRGTGLRPFAWLVLAGFTFYRPAAVAEGRLKAVVMDA GQGLSVLVRTKEHDLLFDTGTAQAAAAGIVPSLNALGVRRLDRLILSHHDNDHDGGFQAV TDGRTVARITAGQPEFYPQAEPCRETQWQWDSVRFELLRPSENAQGLEDNDRSCVLRVVA GGDALLVTGNLGRRGEAELVGKYGGALYSQVLVLGHHGSDTASSGLFLHAVSPQYAVASS GYANAYKHPAAAVQARVKAHGITLLRTDLSGALLFELGDGNVYRGRLKTWKPYWQKKPFD G Prediction of potential genes in microbial genomes Time: Thu May 26 13:25:43 2011 Seq name: gi|289656350|gb|ADEA01000017.1| Neisseria sp. oral taxon 014 str. F0314 cont1.17, whole genome shotgun sequence Length of sequence - 15119 bp Number of predicted genes - 17, with homology - 14 Number of transcription units - 13, operones - 4 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 216 - 257 9.6 1 1 Tu 1 . - CDS 278 - 1657 2172 ## COG1757 Na+/H+ antiporter - Prom 1688 - 1747 4.0 2 2 Tu 1 . - CDS 1806 - 2432 579 ## COG1075 Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold - Prom 2458 - 2517 3.9 + Prom 2482 - 2541 3.1 3 3 Tu 1 . + CDS 2564 - 3463 1399 ## PROTEIN SUPPORTED gi|241760258|ref|ZP_04758353.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific + Term 3504 - 3542 10.2 - Term 3487 - 3534 16.3 4 4 Tu 1 . - CDS 3546 - 4280 908 ## COG2849 Uncharacterized protein conserved in bacteria - TRNA 4729 - 4803 64.3 # Glu TTC 0 0 - TRNA 4816 - 4892 81.7 # Arg ACG 0 0 - Term 4937 - 4967 -1.0 5 5 Tu 1 . - CDS 5042 - 6400 1779 ## COG0232 dGTP triphosphohydrolase - Term 6433 - 6483 15.1 6 6 Tu 1 . - CDS 6614 - 7825 1926 ## COG1158 Transcription termination factor - Prom 7992 - 8051 5.3 - Term 8032 - 8078 7.1 7 7 Tu 1 . - CDS 8150 - 8317 124 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases - Prom 8381 - 8440 5.9 + Prom 8476 - 8535 5.5 8 8 Op 1 . + CDS 8562 - 8717 109 ## + Prom 8729 - 8788 6.8 9 8 Op 2 . + CDS 8815 - 8943 81 ## + Term 8986 - 9034 16.5 - Term 8975 - 9020 15.0 10 9 Tu 1 . - CDS 9033 - 10724 2448 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases - Prom 10782 - 10841 4.5 - Term 10808 - 10849 9.1 11 10 Op 1 . - CDS 10860 - 11480 877 ## COG0625 Glutathione S-transferase 12 10 Op 2 . - CDS 11477 - 12286 1113 ## COG1349 Transcriptional regulators of sugar metabolism - Term 12331 - 12378 14.6 13 11 Op 1 1/0.000 - CDS 12389 - 13108 1086 ## COG1802 Transcriptional regulators - Prom 13315 - 13374 6.5 14 11 Op 2 . - CDS 13384 - 13800 564 ## COG1765 Predicted redox protein, regulator of disulfide bond formation - Prom 13861 - 13920 2.8 15 12 Tu 1 . + CDS 13799 - 14011 88 ## + Term 14108 - 14149 -0.4 16 13 Op 1 12/0.000 - CDS 13930 - 14742 1233 ## COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 17 13 Op 2 . - CDS 14762 - 15118 263 ## COG2145 Hydroxyethylthiazole kinase, sugar kinase family Predicted protein(s) >gi|289656350|gb|ADEA01000017.1| GENE 1 278 - 1657 2172 459 aa, chain - ## HITS:1 COG:NMA0715 KEGG:ns NR:ns ## COG: NMA0715 COG1757 # Protein_GI_number: 15793692 # Func_class: C Energy production and conversion # Function: Na+/H+ antiporter # Organism: Neisseria meningitidis Z2491 # 1 459 1 459 459 719 88.0 0 MFSFKSLLEMPRWEALLVVLVLIAGMGYTIISLGWLPHMSIVTAISALLAYGLCRGLKYG DMQNGMVGAVGQGMGAIYLFFFIGLMVSALMMSGAIPTLMYYGFGLISPTYFYFSAFALC SVIGVAIGSSLTTCATVGVAFMGMGAAFHADLAMTAGAIVSGAFFGDKMSPLSDTTGIAA SIVGIDLFEHIKNMMYTTIPAWVVSAALMLWLLPNVAANDLNSVDVFRTQLEATGLIHTY SLVPFGLLVVLALMRVNAVVAMLFTIAAALAVTYFHSTPDLQQLGAWFYSGYKLEGDAFK DIAKLISRGGLESMFFTQTIVILGMSLGGLLFAVGVIPSLLDAVRAFLSNAGRATFSVAA TSVGVNFLIGEQYLSILLAGETFKPVYDKLGLHSRNLSRTLEDAGTVINPLVPWSVCGVF ISHALNVPVWEYLPYAFFCYLCLVLTLLFGWTGFTLTKK >gi|289656350|gb|ADEA01000017.1| GENE 2 1806 - 2432 579 208 aa, chain - ## HITS:1 COG:VCA0092 KEGG:ns NR:ns ## COG: VCA0092 COG1075 # Protein_GI_number: 15600863 # Func_class: R General function prediction only # Function: Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold # Organism: Vibrio cholerae # 4 205 3 202 209 92 33.0 5e-19 MPHVILLHGLHMHAWAMKPFAVLLKEQGFTVDTFGYYSVWRTLPQHAATLNRFVETGRYG GGPLHFVGHSLGGLVLRHFAAAHPDKVSGRIVTLGTPHCGSMAAERVRSMGLGAPLLGGS YRCALDGGAPPLPSGIELGSIAGSKPQGLGRMLGLHGSQDGTVLVGETRCPGMGGHIVLP VSHSGMIFSRTVAEQTAHFLRCGRFLQP >gi|289656350|gb|ADEA01000017.1| GENE 3 2564 - 3463 1399 299 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|241760258|ref|ZP_04758353.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Neisseria flavescens SK114] # 1 299 1 299 299 543 87 1e-154 MFARAAQELSTVRDILRFAVSRFNDAELFFGHGSDNAHDEAAYLILHTLNLPLDTLEPYL DAKLLQSEKEEVLGLIERRVTERVPVAYLTHQAWQGDFDFYVDERVIVPRSFIYELLGDP LLPWIEHNELVHRALDLCTGSGCLAIQMAHHYPAAEIDAVDLSLDALEVAAVNIEEYGLE ERIRLIHTDLFEGLDDTYDLIVSNPPYVDAESVETLPDEYRHEPELALGSGTDGLDATRR IILHAAKHLNPRGVLLVEIGHNRDILEAAYPELPFTWLETSGGDGFVFLLTREQLLGEK >gi|289656350|gb|ADEA01000017.1| GENE 4 3546 - 4280 908 244 aa, chain - ## HITS:1 COG:NMB1654 KEGG:ns NR:ns ## COG: NMB1654 COG2849 # Protein_GI_number: 15677503 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 1 240 1 240 245 328 67.0 5e-90 MNRLWNTGLAAGLVCCSAAAFAQYHTVYFNQQGKITATMSSVAYVRQYQVDAGMAQVQDF YYPSMKKYSDPYQVSAAQIKDFVPVLGNGTLTLWHFNGQKKMVGPYRNNKPHGEWINWYP NGKKSAVMPYANGLSEGTGSRYYRNGVKESEIQFKNDKANGYWKQWYADGSPKTEMMMVN DKPTEIISWNEDGRLLSEITITNGRRNGIVLDWHDDGAKKSEAVYVDDQLVKKTYWDEEG NELD >gi|289656350|gb|ADEA01000017.1| GENE 5 5042 - 6400 1779 452 aa, chain - ## HITS:1 COG:PA3043 KEGG:ns NR:ns ## COG: PA3043 COG0232 # Protein_GI_number: 15598239 # Func_class: F Nucleotide transport and metabolism # Function: dGTP triphosphohydrolase # Organism: Pseudomonas aeruginosa # 5 447 1 438 443 353 43.0 5e-97 MTAKMNWQNLLSTQRFRTKDGEIVPTVTPSTQEGADALRTDFHIDYDRVVFSGSFRRLGR KTQVHPLAEHDLTHNRLTHSVEVASVGRSIGNRVGVMLQAGGFLPEGNTPSDIGAVVQVA CLAHDLGNPPFGHTGEDALRHWFRNPQNGKYLQGLSQAERNDVQTYEGNAHSLRILASLE MYPNGGGMRLTSATIGALLKYPWTTLHENGLKKFNIYQTELPFIRRVADELGLIELGADY WARHPLSYLMEAADDICYALLDLEDAVELDLLSDAEVESILSELTFIEPTWHAQSGRQRC AMLRGIAIGRAIEDVAQTFMMHQSDLLAGCFKGKDLLALCSPAVQNTLEKAKELARTRIF RHHTKLITEIATFPCLGSILDLLVPAAYALIVEKKTDVRKSLALELLKNSEPILESDSLY QAYMKILDFAGGMTDNAAAKMARDLSGLGIRG >gi|289656350|gb|ADEA01000017.1| GENE 6 6614 - 7825 1926 403 aa, chain - ## HITS:1 COG:NMB0617 KEGG:ns NR:ns ## COG: NMB0617 COG1158 # Protein_GI_number: 15676520 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Neisseria meningitidis MC58 # 1 403 17 419 419 758 93.0 0 MAEQHGIENANRLRKQDLVFAIVRQMMKQGESFTCSGTLEILPDGFGFLRSADTSYLAGP DDIYVSPSQIRRFNLHTGDTIEGSVRVPKDNERYFALVRLDSINCDDPEACKHKILFENL TPLFPTKQFKLERDIKAEENLTSRAIDLVSPIGRGQRALLVAPPKTGKTVMLQNIAHAIT ANYPDVELIVLLIDERPEEVTEMSRSVRGEVVSSTFDEPAQRHVQVAEMVIEKAKRMVEH KKDVVILLDSITRLARAYNTVVPTSGKILTGGVDANALHRPKRFFGAARNVEEGGSLTII ATALVETGSRMDDVIYEEFKGTGNMELHLDRRMAEKRLFPAININKSGTRREELLVPNDQ LQRMWLLRKFLHPMDEIEATEFLVGKLKDSKNNDDFFELMRGK >gi|289656350|gb|ADEA01000017.1| GENE 7 8150 - 8317 124 55 aa, chain - ## HITS:1 COG:NMA1748 KEGG:ns NR:ns ## COG: NMA1748 COG0008 # Protein_GI_number: 15794641 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Neisseria meningitidis Z2491 # 1 53 499 551 573 79 75.0 1e-15 MRGEDGKSLLFTGFLNPGSVKEIAAYIEAAANDLPAESRRQFERLGDFVTDRKKR >gi|289656350|gb|ADEA01000017.1| GENE 8 8562 - 8717 109 51 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKEINSKELQYVSGGGILPWPFPDPSVLPRSNPSTPPRRYNNPHLWLPFFL >gi|289656350|gb|ADEA01000017.1| GENE 9 8815 - 8943 81 42 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKEIDSKELQYVSGGMIIRWPLPDPSVPPHYYNDIRLWFPIL >gi|289656350|gb|ADEA01000017.1| GENE 10 9033 - 10724 2448 563 aa, chain - ## HITS:1 COG:NMA1748 KEGG:ns NR:ns ## COG: NMA1748 COG0008 # Protein_GI_number: 15794641 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Neisseria meningitidis Z2491 # 1 562 12 573 573 1074 90.0 0 MLNKDQFADNHFIRTIIEEDLKSGKHEAIQTRFPPEPNGYLHIGHAKSICLNFGLAYIYD GLCNLRFDDTNPEKENDEYVNAIKEDVEWLGFHWAGEPRFASNYFDQLYDYAVGLIKDGK AYVDDLTPEEMREYRGTLTEAGKNSPYRDRSVEENLDLFTRMKNGEFPDGSKTLRLKIDM ASGNINMRDPVIYRIRRAHHHNTGDKWCIYPMYDYTHCISDAIEGITHSLCTLEFEAHRP LYDWVLDNIPAPHATRPRQYEFSRLELLYSITSKRKLNQLVSDGHVAGWDDPRMPTISGM RRRGYTPEGLRLFAKRAGISKSENIVDMSVLEGAIREELENSAPRMMAVLNPLKVTLTNF QTALAESRTAPYHPNREDMGSRELPISSTLYIEADDFSENPPKGFKRLTLGGEVRLRHSY VMKCDEVVKDAAGNIVELKCSLDYDTLGKNPEGRKVKGVIHWLSAEHAVPATVRLYDRLF TEPRPDAVRGEDGEYLPFTDFLNPESVKEITAYVEAAANDLPAESRWQFERLGYFVTDRK DHAKGRPVFNRTVGLRDTWQAKA >gi|289656350|gb|ADEA01000017.1| GENE 11 10860 - 11480 877 206 aa, chain - ## HITS:1 COG:PM1100 KEGG:ns NR:ns ## COG: PM1100 COG0625 # Protein_GI_number: 15602965 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Pasteurella multocida # 1 203 1 207 207 222 53.0 5e-58 MKLWSSTTSPYVRKVRAAAIHHGLENRIELVTVKSSFAAESAHNQDNPLGRIPVLQLDNG EWLFNSNVIAEYLDSVGQGAPLYPQDASRWQVLNLHALAEGLLENTVAMIAEKMLRPENE WWTARHEQIKQRNARTVPVLAEHLQPFGTQLNIGTLFAVCAVDFLLFRDNLTGAAGLAGI SELKAWADEMNALHPCLAATKPRVSA >gi|289656350|gb|ADEA01000017.1| GENE 12 11477 - 12286 1113 269 aa, chain - ## HITS:1 COG:NMA1749 KEGG:ns NR:ns ## COG: NMA1749 COG1349 # Protein_GI_number: 15794642 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Neisseria meningitidis Z2491 # 1 256 1 255 257 340 70.0 1e-93 MKPQIRRHEKITALVREHGFMSVEQLARELEVTPQTIRRDIGILSAENVLRRYHGGAALG EVLLEGEFGQGGRHSRREEKNAIAQLIAAHIPDNASLFISIGTTMEAVAAALIKQRKNLR IITNNIYVAALASARSDYTVIITSGVVRPLDGGVTGVATVDFINQFKVDYAVLSTHGVEG DGSLLDYDYKEVSVMQAMMANARVRFLGVDHSKFQSHALVRLGDITDFDRVFTDRAPDGE MQKILTAAGVEWLVPEICQHATETAKDEK >gi|289656350|gb|ADEA01000017.1| GENE 13 12389 - 13108 1086 239 aa, chain - ## HITS:1 COG:NMA1751 KEGG:ns NR:ns ## COG: NMA1751 COG1802 # Protein_GI_number: 15794644 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Neisseria meningitidis Z2491 # 2 237 1 237 238 375 83.0 1e-104 MMNNENKTVNAPTTSSLILEERHDSELFRVYALILDGITDHVLLPGKKLTESELCRQMTC SRNTVRSALSLLAHDKIVDLQPNRGAFVHVPDLKEMQDVFNARIEMEGMILGMLVDLPDL EARLQPLYAMIEHEEAASGSGDRVGWNRLSNAFHVELARLLDNDVLFDIMNTLCARSSLI VAVFDAKRREKRPINTHTHAEHREILDLLVSGKRNRVVKIMRRHLGACIERLEQKFEAQ >gi|289656350|gb|ADEA01000017.1| GENE 14 13384 - 13800 564 138 aa, chain - ## HITS:1 COG:NMB1564 KEGG:ns NR:ns ## COG: NMB1564 COG1765 # Protein_GI_number: 15677415 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Neisseria meningitidis MC58 # 1 138 1 138 140 201 76.0 5e-52 MQITSKWMDGMCFVATDEAGHSVVMEGSAAEGCVRRGPSPMEMLLMGVAGCSSTDVVMIV EKQRQDITGCQAAVTAKRAEEPPRVFTEIHIHFTVTGRGLKAGAVEQAVRLSAEKYCSAS IMLGKTAKITHSFEIVEA >gi|289656350|gb|ADEA01000017.1| GENE 15 13799 - 14011 88 70 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MILSCLEMPPPHLSGGFGLKTVRIVNHFGGRQNREAGRVFSDGLQSRYAQWLTGPCPEPM FSGLAMAAAI >gi|289656350|gb|ADEA01000017.1| GENE 16 13930 - 14742 1233 270 aa, chain - ## HITS:1 COG:NMB1616 KEGG:ns NR:ns ## COG: NMB1616 COG0351 # Protein_GI_number: 15677466 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase # Organism: Neisseria meningitidis MC58 # 3 270 2 268 268 377 75.0 1e-104 MEQERFVQTLTIAGSDSGGGAGIQADLKTFQMRGVFGTSAVTAVTAQNTLGVAAVHLVPT EVIRSQIEAVRDDFQISAFKLGMLGTAEIIECVAECLKECSFGPMVLDPVMIAKGGAPLL HDSAVAAMKRHLLPLADVLTPNLPETQVLTGVDVENAQDAERAARILQDAGVKTVVIKGG HSGGSRSAQCTDWVFLPDGEKLELSGRRYPTPHTHGTGCTFSACVTAELAKGFSVENAVK TAKAYIAAAIANPLNIGSGHGPVNHWAYRD >gi|289656350|gb|ADEA01000017.1| GENE 17 14762 - 15118 263 118 aa, chain - ## HITS:1 COG:PM1262 KEGG:ns NR:ns ## COG: PM1262 COG2145 # Protein_GI_number: 15603127 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxyethylthiazole kinase, sugar kinase family # Organism: Pasteurella multocida # 3 116 154 267 267 111 55.0 3e-25 TAAKRYGCVAAVSGATDYVSDGLCTVAVANGTPLFPKITASGCLLGSVVAAFLAVAPEQE YLDAAAEACAVYAVAGETAAEGLAAAQSGTFGVRLVDSLAAVTARQVSEAARTSVQAV Prediction of potential genes in microbial genomes Time: Thu May 26 13:26:10 2011 Seq name: gi|289656349|gb|ADEA01000018.1| Neisseria sp. oral taxon 014 str. F0314 cont1.18, whole genome shotgun sequence Length of sequence - 40710 bp Number of predicted genes - 41, with homology - 39 Number of transcription units - 28, operones - 7 average op.length - 2.9 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 379 435 ## COG2145 Hydroxyethylthiazole kinase, sugar kinase family - Prom 478 - 537 4.5 + Prom 764 - 823 11.1 2 2 Op 1 1/0.167 + CDS 891 - 3263 3305 ## COG1629 Outer membrane receptor proteins, mostly Fe transport 3 2 Op 2 . + CDS 3339 - 3956 1172 ## COG3230 Heme oxygenase + Term 3970 - 4018 9.9 + Prom 4070 - 4129 5.6 4 3 Tu 1 . + CDS 4156 - 4905 1339 ## COG3176 Putative hemolysin 5 4 Tu 1 . + CDS 5009 - 5758 1042 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase - Term 5840 - 5897 16.1 6 5 Tu 1 . - CDS 5917 - 6324 262 ## PROTEIN SUPPORTED gi|15900839|ref|NP_345443.1| lactoylglutathione lyase - Prom 6486 - 6545 5.1 + Prom 6454 - 6513 4.6 7 6 Op 1 2/0.083 + CDS 6535 - 8076 2092 ## COG3288 NAD/NADP transhydrogenase alpha subunit 8 6 Op 2 . + CDS 8080 - 8463 512 ## COG3686 Predicted membrane protein 9 6 Op 3 . + CDS 8560 - 8961 600 ## COG3791 Uncharacterized conserved protein 10 6 Op 4 . + CDS 9054 - 9476 270 ## gi|298369421|ref|ZP_06980739.1| hypothetical protein HMPREF9016_01091 11 6 Op 5 . + CDS 9479 - 10234 733 ## CLIBASIA_01655 hypothetical protein + Term 10269 - 10310 11.3 + Prom 10265 - 10324 3.1 12 7 Tu 1 . + CDS 10350 - 11735 2334 ## COG1282 NAD/NADP transhydrogenase beta subunit + Term 11757 - 11808 10.1 + Prom 12145 - 12204 4.6 13 8 Tu 1 . + CDS 12251 - 13666 793 ## COG1357 Uncharacterized low-complexity proteins + Term 13680 - 13727 6.4 - Term 14532 - 14583 12.9 14 9 Op 1 . - CDS 14640 - 14753 107 ## gi|261365544|ref|ZP_05978427.1| putative lipoprotein 15 9 Op 2 . - CDS 14894 - 15541 1033 ## COG0546 Predicted phosphatases 16 9 Op 3 . - CDS 15595 - 16554 1493 ## COG1230 Co/Zn/Cd efflux system component 17 9 Op 4 . - CDS 16600 - 17430 926 ## COG2833 Uncharacterized protein conserved in bacteria - Prom 17454 - 17513 3.3 - Term 17486 - 17514 3.0 18 10 Tu 1 . - CDS 17534 - 18571 1444 ## gi|298369428|ref|ZP_06980746.1| hypothetical protein HMPREF9016_01098 - Prom 18742 - 18801 4.3 + Prom 18850 - 18909 4.3 19 11 Tu 1 . + CDS 18989 - 19609 1108 ## COG2834 Outer membrane lipoprotein-sorting protein + Term 19630 - 19675 9.5 - Term 19618 - 19660 11.1 20 12 Op 1 . - CDS 19703 - 20791 1448 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 21 12 Op 2 2/0.083 - CDS 20853 - 21842 1221 ## COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D 22 12 Op 3 3/0.083 - CDS 21923 - 22615 976 ## COG0586 Uncharacterized membrane-associated protein - Prom 22671 - 22730 4.9 - Term 22726 - 22770 13.5 23 13 Op 1 9/0.000 - CDS 22790 - 24130 2082 ## COG1109 Phosphomannomutase - Prom 24165 - 24224 1.7 24 13 Op 2 . - CDS 24232 - 25095 1006 ## COG0294 Dihydropteroate synthase and related enzymes - Prom 25214 - 25273 3.5 + Prom 25095 - 25154 3.6 25 14 Tu 1 . + CDS 25251 - 26444 1830 ## COG1448 Aspartate/tyrosine/aromatic aminotransferase - TRNA 26504 - 26579 76.9 # Arg CCG 0 0 - Term 26448 - 26492 13.1 26 15 Tu 1 . - CDS 26643 - 26825 113 ## 27 16 Tu 1 . + CDS 26991 - 27863 1185 ## COG3245 Cytochrome c5 + Term 27890 - 27924 3.5 - Term 27878 - 27912 3.5 28 17 Tu 1 . - CDS 28078 - 28956 1214 ## COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase - Prom 29086 - 29145 4.3 + Prom 29067 - 29126 3.6 29 18 Tu 1 . + CDS 29148 - 31265 3023 ## COG2982 Uncharacterized protein involved in outer membrane biogenesis + Term 31269 - 31321 17.0 - Term 31477 - 31519 4.1 30 19 Tu 1 . - CDS 31551 - 32453 1146 ## COG0583 Transcriptional regulator - Prom 32494 - 32553 3.8 + Prom 32468 - 32527 7.3 31 20 Tu 1 . + CDS 32556 - 33146 834 ## COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) - Term 33195 - 33227 -0.8 32 21 Tu 1 . - CDS 33257 - 33781 574 ## PROTEIN SUPPORTED gi|229255399|ref|ZP_04379326.1| acetyltransferase, ribosomal protein N-acetylase - Term 33838 - 33871 -0.6 33 22 Tu 1 . - CDS 33875 - 35353 2086 ## COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases + Prom 35344 - 35403 3.5 34 23 Tu 1 . + CDS 35545 - 35658 76 ## + Term 35668 - 35741 26.2 + TRNA 35650 - 35725 86.2 # Met CAT 0 0 35 24 Op 1 . + CDS 36008 - 36526 530 ## NMC1583 hypothetical protein + Term 36546 - 36592 7.8 36 24 Op 2 . + CDS 36608 - 37225 558 ## Bpet4372 4'-phosphopantetheinyl transferase, fragment (EC:2.7.8.-) + Term 37435 - 37467 1.0 37 25 Op 1 11/0.000 - CDS 37283 - 38518 1603 ## COG0304 3-oxoacyl-(acyl-carrier-protein) synthase 38 25 Op 2 4/0.083 - CDS 38515 - 39243 207 ## PROTEIN SUPPORTED gi|163797523|ref|ZP_02191474.1| 50S ribosomal protein L9 - Prom 39422 - 39481 5.7 39 26 Tu 1 . - CDS 39534 - 39854 186 ## COG4706 Predicted 3-hydroxylacyl-(acyl carrier protein) dehydratase - Prom 40073 - 40132 5.8 + Prom 40087 - 40146 6.8 40 27 Tu 1 . + CDS 40294 - 40437 60 ## COG4105 DNA uptake lipoprotein + Term 40472 - 40503 4.1 - Term 40460 - 40491 4.1 41 28 Tu 1 . - CDS 40543 - 40710 109 ## COG1555 DNA uptake protein and related DNA-binding proteins Predicted protein(s) >gi|289656349|gb|ADEA01000018.1| GENE 1 1 - 379 435 126 aa, chain - ## HITS:1 COG:HI0415 KEGG:ns NR:ns ## COG: HI0415 COG2145 # Protein_GI_number: 16272364 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxyethylthiazole kinase, sugar kinase family # Organism: Haemophilus influenzae # 1 126 3 128 265 147 63.0 6e-36 MQIRFLDKVRRQNPLVHNITNGVAMNFTANGLLALGASPIMADEVSEMADMAAICSALLI NIGTLRRQTVEAMLAAGKAANARGIPVVFDPVGAAATQFRRDTVERLLAEVRFAAIRGNA AEMAYI >gi|289656349|gb|ADEA01000018.1| GENE 2 891 - 3263 3305 790 aa, chain + ## HITS:1 COG:NMB1668 KEGG:ns NR:ns ## COG: NMB1668 COG1629 # Protein_GI_number: 15677517 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Neisseria meningitidis MC58 # 1 790 1 791 791 1404 88.0 0 MKPSHILPLAALIGSIFGNPVFAADAAASETAPAQTELKQVTVKGHRNAPAAVERVNLGR IQQEMIRDNKDLVRYSTDVGLSDSGRHQKGFAIRGVEGNRVGVSIDGVSLPDSEENSLYA RYGNFNSSRLSIDPELVRNIDIVKGADSFNTGSGALGGGVNYQTLQGRDLLLPERQFGVM MKNGYSSRNREWTNTVGFGMDNGSVDAALLYSQRRGHETESAGNRGYAVEGKGSGANIRG SARGIPDPSKHKYHSFLAKIGYQINENHRVGASLNGQQGHNYTNEESYNLMTSAWREADD VNRRRNANLFYEWTPQSGWLSLVKADIDYQRTKVSAVNYKGLFPTNYTTWETEYGKKEVG EIYNRSMDTRFKRFTLRLDSQPLQLGGQHRLSFKTFASRRDFENLNRDDYYFSGRVSRTT STIQHPVKTTNYGFSLSDQIQWNSVFSSRAGIRYDHTKMTPQQLNADCHACDKTPPAPNT YSGWSGFAGLAAQLNQAWRVGYDITSGYRVPNASEVYFTYNHGSGNWLPNPNLKAERSTT HTLSLQGRGEKGMLDANLYQSNYRNFLSEERKLTASGEPGCTQMDYYYGLCSDPYTEKLD WQMQNIDKARIRGIELTGRLNLDKVVSFVPEGWKLFGSVGYAKSKLSGDNSLLSTQPLKV IAGIDYESPSEKWGVFSRLTYLGAKKAKDAQYTVYENNGWGTPLQKKVQDYPWLNKSAYV FDMYGFYKPVKNLTLRAGVYNLFNRKYTTWDSLRGLYSYSTTNAVDRDGKGLERYRAPGR NYAVSLEWKF >gi|289656349|gb|ADEA01000018.1| GENE 3 3339 - 3956 1172 205 aa, chain + ## HITS:1 COG:NMB1669 KEGG:ns NR:ns ## COG: NMB1669 COG3230 # Protein_GI_number: 15677518 # Func_class: P Inorganic ion transport and metabolism # Function: Heme oxygenase # Organism: Neisseria meningitidis MC58 # 5 205 9 209 209 322 82.0 3e-88 MSNEITFAKTLKEKTATIHDSVDNLVMSVEPFASNENYIKFLKLQSVFHKAVDHIYKNPE LNKAIPELEYMARYDAVVKDLADLGEQPYEYGKPLPHETGNKAIGWLYCAEGSNLGAAFL FKHAKKLDFSEEKGARHLAAHPAGRGKHWRAFVELLNALPLSEADQAEAIEGAKEAFAFY KVVLRETFGLPAGAEAPEGMQAHRH >gi|289656349|gb|ADEA01000018.1| GENE 4 4156 - 4905 1339 249 aa, chain + ## HITS:1 COG:RSc1538 KEGG:ns NR:ns ## COG: RSc1538 COG3176 # Protein_GI_number: 17546257 # Func_class: R General function prediction only # Function: Putative hemolysin # Organism: Ralstonia solanacearum # 15 245 43 275 278 185 40.0 8e-47 MAQSRFNQTGPKIGLSVRLAETQAEIEAAQRLRYQVFAQELGAEIESDDGRDVDPYDQYC HHLLAFDDATGEVIGCYRLITEDTAQKVGGWYSEHEFDLTPLKDILPQTVELGRACTHPD YRNGGLVMLLWTGLVKFMKDENLRFMIGCGSIEMRDGGSDAAGLYHILKTKYLAPEQWRV KALNPLKWDRITPSENPVTPPLIKGYLKAGAWFCGEPCVDEAFSCADVLIMMDITKLSDR YLQKFAPRP >gi|289656349|gb|ADEA01000018.1| GENE 5 5009 - 5758 1042 249 aa, chain + ## HITS:1 COG:RSc0680 KEGG:ns NR:ns ## COG: RSc0680 COG0204 # Protein_GI_number: 17545399 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Ralstonia solanacearum # 6 243 22 264 266 131 34.0 1e-30 MTAKLRFAFRLSCIAVCLLYGMAEMFFLFPFYSKRRKLRAIQLWSLRVLASCGMKLETFG TPPVEGRGQLLICNHISWLDIMAVNGAFPGRFVAKDDVAKWPVVGYLATQAQTVYVTRNK GTKGNTAKINNVTEALQNGDTVALFPEGTSTEGREILPFKPSFFQTAYNANVPLIPVLCR YPNPDGSSPNPHMAYYGDISLWQSICMIIGQPSGKAELHFLDPIAAPEDRYAAAQEVHAL LSRKQQELS >gi|289656349|gb|ADEA01000018.1| GENE 6 5917 - 6324 262 135 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15900839|ref|NP_345443.1| lactoylglutathione lyase [Streptococcus pneumoniae TIGR4] # 2 127 4 126 126 105 44 4e-22 MRLLHTMLRVGNLEKSLDFYQNVLGMKLLRRRDYPEGRFTLAFVGYGGEDENTVLELTHN WDTESYDLGDAYGHIAIEVDDAYKACERVKEKGGKVVREAGPMKHGTTVIAFVEDPDGYK IEFIQKKSGNDSVKY >gi|289656349|gb|ADEA01000018.1| GENE 7 6535 - 8076 2092 513 aa, chain + ## HITS:1 COG:NMA1177 KEGG:ns NR:ns ## COG: NMA1177 COG3288 # Protein_GI_number: 15794122 # Func_class: C Energy production and conversion # Function: NAD/NADP transhydrogenase alpha subunit # Organism: Neisseria meningitidis Z2491 # 1 513 1 513 513 916 96.0 0 MRIGIPKESLAGETRVACTPATVSLLQKLGFETVVEKNAGLAASLDDAAFQAAGATVADK ATVWACPLIYKVNAPSEGELPLLKEGQTIVSFLWPRQNEALVEALRAKKVNALAMDMVPR ISRAQALDALSSMANISGYRAVIEAANAFGRFFTGQITAAGKVPPAQVLVIGAGVAGLAA IGTANSLGAVVRAFDTRLEVAEQIESMGGKFLKLDFPQESGGSGDGYAKVMSDEFIAAEM KLFAEQAKEVDIIITTAAIPGKPAPKLITKEMVESMKSGSVIVDLAAATGGNCELTKPGE LFVTDNGVKIIGYTDMANRLAGQSSQLYATNLVNLTKLLSPNKDGEITLDFEDVIIRNMT VTRDGEITFPPPPIQVSAQPQQTPSEKAAPAAKPEPKPVPLWKKLAPAVIAAVLVLWVGA VAPEAFLNHFIVFVLACVIGYYVVWNVSHSLHTPLMSVTNAISGIIVVGALLQISQGNGF VSLLAFIAILIASVNIFGGFFVTRRMLNMFRKG >gi|289656349|gb|ADEA01000018.1| GENE 8 8080 - 8463 512 127 aa, chain + ## HITS:1 COG:NMA1176 KEGG:ns NR:ns ## COG: NMA1176 COG3686 # Protein_GI_number: 15794121 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis Z2491 # 1 126 1 126 127 152 72.0 2e-37 MTLAYWCILLAYLLPLFCATIAKATGGFKPSDNRNPREFLAHTQGLSARADAAQQNGFET FAPFAAAVLVAHATGNAEQSTINLLAVLFIAFRLAFIYCYLADKSTMRSLTWAGGLCCII GLFVAAV >gi|289656349|gb|ADEA01000018.1| GENE 9 8560 - 8961 600 133 aa, chain + ## HITS:1 COG:SPAC29B12.13 KEGG:ns NR:ns ## COG: SPAC29B12.13 COG3791 # Protein_GI_number: 19115902 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Schizosaccharomyces pombe # 2 127 5 132 137 86 35.0 1e-17 MKAKCLCGDVSLEVEHDKHVHACHCGMCRIWGSGATFSLIAAKPPKIDGGENIARYHSSE WAERAFCKNCGTHLFYHFLPNDSYFVFAGLFADNADFTLEEQIFIDAKAPYYELANDTPK LTEEEFLAQFGGG >gi|289656349|gb|ADEA01000018.1| GENE 10 9054 - 9476 270 140 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298369421|ref|ZP_06980739.1| ## NR: gi|298369421|ref|ZP_06980739.1| hypothetical protein HMPREF9016_01091 [Neisseria sp. oral taxon 014 str. F0314] # 1 140 1 140 140 248 100.0 9e-65 MKKSSIIILISSFFLTACDLGFPRMSVNYDHLPKGEIKEYITKIFPNKPEKEELGKMVSS HLNGDNSPENIQNVVSNMGMTCVAGKEFCEYNGYIRSRATGGHSGSGRAKHIYRIIVSPK KGLDSLNVEKQIVEDTEKGN >gi|289656349|gb|ADEA01000018.1| GENE 11 9479 - 10234 733 251 aa, chain + ## HITS:1 COG:no KEGG:CLIBASIA_01655 NR:ns ## KEGG: CLIBASIA_01655 # Name: not_defined # Def: hypothetical protein # Organism: L.asiaticus # Pathway: not_defined # 6 164 11 167 171 115 40.0 2e-24 MADTGNYKIVKSQLPLIGGTAGHNFIVVLDPNNRPIHELNGLATSQDGEIKPIGYLPSDR LRVYNEQEAKMRFYHPSQNQEIVFEGSYEEVMHKFNLGYEIGQEINRRNPSYPILGLGQN SNSVASTLLRGMNLKDPDLGMALTPGENSLLIPEEELKRIRQNWEQQHKPLNSSQEKPQS KYEETMAMLQGLLNDTDGSYAKKLLADNPDKVASFNERVQQALEEERQQQLVAQENQNIQ QEQQRGFSRSV >gi|289656349|gb|ADEA01000018.1| GENE 12 10350 - 11735 2334 461 aa, chain + ## HITS:1 COG:NMB0978 KEGG:ns NR:ns ## COG: NMB0978 COG1282 # Protein_GI_number: 15676870 # Func_class: C Energy production and conversion # Function: NAD/NADP transhydrogenase beta subunit # Organism: Neisseria meningitidis MC58 # 1 461 1 461 461 786 91.0 0 MSSGLVTAAYIVAAILFIFSLAGLSKQETAKQGCYSGVAGMAVALFVTVFSENTNGLGWI IIAMLIGAAIGIYKAKKVEMTEMPELIALLHSFVGLAAVLVGFNSYIEPGDISSDMHTIH LVEVYLGIFIGAVTFTGSLVAFGKLNGKISSAPLQLPAKHKLNLAALVLSFILMLVFVSV DGSGLILILMTLIALAFGWHLVASIGGADMPVVVSMLNSYSGWAAAAAGFMLSNDLLIVT GALVGSSGAILSYIMCKAMNRSFISVIAGGFGTDGSSAAADGEEIGEYREAKPAEVAEML RNASSVIITPGYGMAVAQAQYPVAEITELLRKNGAEVRFGIHPVAGRLPGHMNVLLAEAK VPYDIVLEMDEINDDFPETDVVLVIGANDTVNPAAQTDPNSPIAGMPVLEVWKAKEVVVF KRSMNTGYAGVQNPLFFNENSVMCFGDAKKTVDEILAELKK >gi|289656349|gb|ADEA01000018.1| GENE 13 12251 - 13666 793 471 aa, chain + ## HITS:1 COG:PM0591 KEGG:ns NR:ns ## COG: PM0591 COG1357 # Protein_GI_number: 15602456 # Func_class: S Function unknown # Function: Uncharacterized low-complexity proteins # Organism: Pasteurella multocida # 39 399 27 381 524 254 41.0 3e-67 MAKWNIWKKITETISKSKTWLDGQSNAVKVLCAGAMSVIIFVLAYLAAIRNSDSNSVGYW NFIILIVSAPVAFVIWHFRDENNRQQIENQRKDINLKEFQKLSEWVSGVHLPEIKTVSKT TQKSSSKDGAEITEQTMEQSEEYAKKPDAADFDTFSKREGAVALQISAIYNLLPFFRGDY GESFRLPAFNLLKSAWQAMQQDSLEKLEKKNLSDQTRKDIIDELRRKARSPMGVALTHVL LSLNQENKQLNLRDFPEMLSNICLAGMSFHLSVVSEIARDRGLSNLDLRGADFRGIAFVG AKLQGCRLTGAKLDGANLWSAKLQDIRLIGTDLQNAILIDANLQKANLHRAELRNAQLKN ANLKNADLSYANLQYANLKNADLSFTNLKACNFGWEQLKDNGQLSFAEITINDFINKIYP DWNAKNNPEWEALTDGEQTEAMQKFCCETWMLIFDEKGRPIASPIQIQRKS >gi|289656349|gb|ADEA01000018.1| GENE 14 14640 - 14753 107 37 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261365544|ref|ZP_05978427.1| ## NR: gi|261365544|ref|ZP_05978427.1| putative lipoprotein [Neisseria mucosa ATCC 25996] # 1 37 137 173 173 67 89.0 3e-10 MAKYSKGKQVNKLDLEVNGSKISVEDLEKWLDANGLR >gi|289656349|gb|ADEA01000018.1| GENE 15 14894 - 15541 1033 215 aa, chain - ## HITS:1 COG:NMA0828 KEGG:ns NR:ns ## COG: NMA0828 COG0546 # Protein_GI_number: 15793799 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Neisseria meningitidis Z2491 # 1 215 1 215 220 332 75.0 4e-91 MIQAALFDLDGTLADTALDLGGALNTVLRRHNLPEKSIAEIRPYASHGVAGLLKIGVGMT AEHPDFAAWRQECLEAYSLCYADKTTLFDGVNEMIAELDRRGIKWGIITNKPMRFTDKLV PKLGFTIPPAVVVSGDTCGEAKPSVKPMLYACEQIHADPQHTVYVGDAERDMQAGRNAGM KTVLADWGYIAAEDQTETWPFDHRIASPSALPDLL >gi|289656349|gb|ADEA01000018.1| GENE 16 15595 - 16554 1493 319 aa, chain - ## HITS:1 COG:BS_czcD KEGG:ns NR:ns ## COG: BS_czcD COG1230 # Protein_GI_number: 16079718 # Func_class: P Inorganic ion transport and metabolism # Function: Co/Zn/Cd efflux system component # Organism: Bacillus subtilis # 11 319 2 310 311 349 57.0 4e-96 MSHHHEHHHHAHAHTHTANKKVLRVSFIIIAAFMLLEAFGGWLTHSLALLSDAGHMFSDA FSLGVALWAFKLGEKETTLQKTFGYKRFEILTAMFNGLSLVAIAVLIFYEAVKRLLYPPE IATLGMLVISVVGLLVNIGVAVYMLKNSDTEANVNMRGAYLHVLSDLVGSIGAIAAAVLM MAFGWKWADPLASVFVAALVGRSGWSLLKQTLHILMEGAPENIHTDDLLAVIRNTDGVKS VHDLHVWTITSNINVLSCHIVVDGSMTVAESEQIAYRIEHELSHKNIGHCTIQIESERHP HKNEILCSPYAEAHHSHSH >gi|289656349|gb|ADEA01000018.1| GENE 17 16600 - 17430 926 276 aa, chain - ## HITS:1 COG:NMB0621 KEGG:ns NR:ns ## COG: NMB0621 COG2833 # Protein_GI_number: 15676524 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 6 276 6 275 275 473 88.0 1e-133 MPYNPYPLLEQALLEHHTDRKGEMVDSLSAAVENNGLTAGGVAPPLDFRHAGRPPKPVLV APSQLTPRKMNTAEGYAAMLHAIAHIEFNAINLALDAAYRFRTLPFQFVRDWVRVAKEEV YHFRLMRERLRAFGFDYGDFEAHNHLWDMAYKTAYDPLLRMALVPRVLEARGLDVTPGIR AKVEQRGDSETCGVLDIIYRDEVGHVAIGNHWYQHLCRERGLEPVALFRSLIARYDMFIF RGYVNIEAREKAGFSRFELDMLEDFEQGLKQGKKVV >gi|289656349|gb|ADEA01000018.1| GENE 18 17534 - 18571 1444 345 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298369428|ref|ZP_06980746.1| ## NR: gi|298369428|ref|ZP_06980746.1| hypothetical protein HMPREF9016_01098 [Neisseria sp. oral taxon 014 str. F0314] # 1 345 17 361 361 593 100.0 1e-168 MKNIKLLSALAAVGASFVAFEAHAGMVSDAHGNVGYDTAEECDAAVQSGQAKFYESFTHK PTLKRPGETSVQAATIKDLGPQYRLGACDKGVGRRMGRDGVSKALQGKYIPFSPDMQVNV YLDASGKPTRASMQQCDNWFSGNAPRAVPLPPERAPEPAAEAAPAKNESAAEKKAGARPY VFGTAGALRDGASVKRGNRRNKDRDTSAAGQVGAGVQFNEWLGGEVYYQGGDKQEYDAPE NLGNEKVEVRNDTYGGRLTAGTKVAKKARVFAKAGVAGVRHKSKTAGAKDSDTKARATAG VGATVDVNDNWAVRADYDHYFKRNSDEDVKWKGADYLGVGAQYKF >gi|289656349|gb|ADEA01000018.1| GENE 19 18989 - 19609 1108 206 aa, chain + ## HITS:1 COG:NMB0622 KEGG:ns NR:ns ## COG: NMB0622 COG2834 # Protein_GI_number: 15676525 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane lipoprotein-sorting protein # Organism: Neisseria meningitidis MC58 # 1 206 2 207 207 317 80.0 9e-87 MKQNTLLKFLAAAGLSITVGLAQAGAVDALKKFNNDSDGISGSFSQTVKSKKKTQTTNGT FQILRPGLFKWEYTKPYKQTIVGDGKTIWLYDVDLAQVTKSAQDQTIGDSPAAILSNKTA LDSSYALKEDGASNGISYVLATPKKNNAGYQYIRIGFKGDNLAAMQLKDGFGNETTISFS NLNTKPNLSRNAFKFTPPKGVDVLSN >gi|289656349|gb|ADEA01000018.1| GENE 20 19703 - 20791 1448 362 aa, chain - ## HITS:1 COG:NMB1679 KEGG:ns NR:ns ## COG: NMB1679 COG2265 # Protein_GI_number: 15677527 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Neisseria meningitidis MC58 # 1 361 1 361 362 565 76.0 1e-161 MTAYQQQLRDKTDYLKKLFQGLDFPEIEVFESPEQHYRMRAEFRIWHEGGEMFYAMFERG QKASGASLIRCDQFPAASESINALMPKLIEAAAQNPELKNRWYAAEFLSALSGEMLVTMI YHKKLGEAWQRAAEILARELGIHIIGRSRGQKIVLTQGYITEELNVNGKTFRYRQVEGSF TQPNARVCEKMLGWACDVAQNLSGDLLELYCGNGNFTLPLSQYFRQVLATEVSKTSVYAA QWNIEANQRDNIKIARLSAEEFTKAYTQSREFRRLQEQGILLKDYVFSAIFVDPPRAGVD EETLKLVSQFDNIIYISCNPETLRANLDTLCRTHTVKRAALFDQFPFTHHIESGVWLERK LK >gi|289656349|gb|ADEA01000018.1| GENE 21 20853 - 21842 1221 329 aa, chain - ## HITS:1 COG:NMA1947 KEGG:ns NR:ns ## COG: NMA1947 COG0252 # Protein_GI_number: 15794830 # Func_class: E Amino acid transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D # Organism: Neisseria meningitidis Z2491 # 1 328 1 329 329 445 68.0 1e-125 MRRKIFVLYTGGTIGMSRGSDGLRPDTALAGKALQPFSDGLDFDWHICDPLIDSSAVTLE DWRGWLDILAAKIPQYDGVLVLHGTDTMAYTANLFALALQGLDKPVVLTGSQWPYDADGS DAPFNLSVAAAAFSLGLKEVVIAFDGKLYPAVGSSKVSTEIAAGFANPHFGAVAEWHENT GWQNLMPRPSENNRSDGLQVSVLNPAAEVACRTLIPGFAVRDLSDGLKTTRAKALILQSY GHGNAPALPEFIEAVRQFTRKGGLLLNISQVPQGCAAAVYAQGGPLRQAGALTAGKCNLE TATALLTLAVSNGWDAATVTKKLEENRLV >gi|289656349|gb|ADEA01000018.1| GENE 22 21923 - 22615 976 230 aa, chain - ## HITS:1 COG:NMB1689 KEGG:ns NR:ns ## COG: NMB1689 COG0586 # Protein_GI_number: 15677537 # Func_class: S Function unknown # Function: Uncharacterized membrane-associated protein # Organism: Neisseria meningitidis MC58 # 1 208 1 208 227 331 78.0 6e-91 MFAFLEAFFSQYGYAAVFLVLIACGFGVPIPEDITLVTGGVISGLGQANAHMMVLVGMLG VLAGDGLMFVAGRVWGHRILDFKPVARVMTPKRYAQVQEKFDKYGNWVLFVARFLPGLRT AVFVTAGISRKVSYLRFILMDGLAALISVPVWVYLGSYGAENIDWLMAKVHSLQSGLLVL IGIGAAVLLFFWWRRRRRISFFRAKLSELRDKRKAAKAAKAAKNAGQSSE >gi|289656349|gb|ADEA01000018.1| GENE 23 22790 - 24130 2082 446 aa, chain - ## HITS:1 COG:NMA1949 KEGG:ns NR:ns ## COG: NMA1949 COG1109 # Protein_GI_number: 15794832 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Neisseria meningitidis Z2491 # 1 441 1 441 444 812 92.0 0 MAKKYFGTDGVRGEVGQFPITPDFVLKLGYAAGQVLVQHDSEHRPTVLIGKDTRISGYML EAALVAGFTSAGVNVIQTGPLPTPGVAYLTRALRLSAGVMISASHNVYSDNGIKFFAEGG VKLSDEIELEIEAKIDEEMKTQPSDRLGRARRINGADDRYIEFCKSTFPNHLDLRGLKLV VDTANGAGYHVAPKVFHELGAQVVSIGDEPNGYNINEKCGATHPKTLQAAVLQNEADYGL ALDGDGDRLMMVDRNGKVYDGDSLIYVIAKARALEGIEIGGVVGTVMTNMAMEIALKEQG VQFCRAKVGDRYVLEQLHQRGWLIGGEASGHILCMDKHNTGDGIISALQVLAALRILGQD LATVCADWQPYPQTMINVRIQKGQKWQEASAGVLAEVEKELEGRGRVVLRASGTEPVVRV MVEAKQADWAKKGAERIAAAIQGSKK >gi|289656349|gb|ADEA01000018.1| GENE 24 24232 - 25095 1006 287 aa, chain - ## HITS:1 COG:NMB1691 KEGG:ns NR:ns ## COG: NMB1691 COG0294 # Protein_GI_number: 15677539 # Func_class: H Coenzyme transport and metabolism # Function: Dihydropteroate synthase and related enzymes # Organism: Neisseria meningitidis MC58 # 1 281 1 283 285 410 78.0 1e-114 MKPSVWQAGRFRIDLAQPKIMGIANITPDSFSDGGSYSQNVKTALAHAERLLKDGADILD IGGESTRPGADYVPPEEEWRRVAPILAEVAKWNVPVSVDTRRTEIMRRALEQGVADIIND VAALTDEGALALLARQPDTGICLMHMRGLPENMQDNPQYGDVAGEVARYLSGRAEACMEA GIAAERLVLDPGFGFGKNLQHNIELMRHLPELMAETGFPLLIGVSRKRMIGELTGEADAA ERVHGSVAAALASVARGVQIVRVHDVKATADALKVWRALGVFQPQAV >gi|289656349|gb|ADEA01000018.1| GENE 25 25251 - 26444 1830 397 aa, chain + ## HITS:1 COG:NMB1678 KEGG:ns NR:ns ## COG: NMB1678 COG1448 # Protein_GI_number: 15677526 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Neisseria meningitidis MC58 # 1 397 1 397 397 756 94.0 0 MYRHIEYYPGDPILSLVETFKNDPRPEKVNLSIGIYFDDEGKMPVLESVSRAETARAAVP APSPYLPMEGLNTYRSAVQHLLFGKDNRALAQGRIVTVQTLGGSGALKVGADFLHRWFPE ARAYVSDPTWDNHRGIFEGAGFEVGTYPYYDPATVGVKFDEMTAFFNTLPEHSILILHPC CHNPTGVDMSEQQWDEVLQIIKTRKLIPFMDIAYQGFGGDLDSDAYTIRKAVEMDLPLFV SNSFSKNLSLYGDRVGGLSVVCPNKEEAELVFGQLKFTVRRIYSSPPAHGAYIAADVMNS PELYALWQNEVYVMRDRIHAMRQKLYDVLNAQIPDRDFTYFIKQRGMFSYTGLSVEQVRR LRDEFAVYLLDSGRMCVAGLNASNIAYVADAFAEVLK >gi|289656349|gb|ADEA01000018.1| GENE 26 26643 - 26825 113 60 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLNAINNILLDYTEFTGGFQSLMPKFCKKICKIMKAGYLKRFVFRPCGGENALLCNVALY >gi|289656349|gb|ADEA01000018.1| GENE 27 26991 - 27863 1185 290 aa, chain + ## HITS:1 COG:NMA1936 KEGG:ns NR:ns ## COG: NMA1936 COG3245 # Protein_GI_number: 15794819 # Func_class: C Energy production and conversion # Function: Cytochrome c5 # Organism: Neisseria meningitidis Z2491 # 1 290 1 279 279 391 78.0 1e-109 MKQPSNIRAGGSALFTLVSGIVILLAVVFFCIKLAGSGSFGDVAATTESATQTRIQPVGQ VTMGDGIAVGERKGDQIFNKICIQCHAADSIVPNAPKLDNKGDWAPRIAQGFDTLFQHAL NGFNAMPAKGGAADLTDQELKRVITYMANKGGASFPDPDAAAPADAAASGAAPAAASAAT DGTASAAPAAADAAKAEDKGAAAPASSGADGKKVYEASCQACHGGAVPGVPHVGKKEDWA PRIKQGKDTLHKHALEGFNAMPAKGGNSGLSDDEVKAAVDYMANQSGAKF >gi|289656349|gb|ADEA01000018.1| GENE 28 28078 - 28956 1214 292 aa, chain - ## HITS:1 COG:NMB1692 KEGG:ns NR:ns ## COG: NMB1692 COG2876 # Protein_GI_number: 15677540 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Neisseria meningitidis MC58 # 1 290 1 290 297 305 54.0 6e-83 MIIVMQKKAGAEEVARVVGIIRSRGLTEHISQGSERTVIGAVGDERVFRSNELDNLPGVE RVIRILNDWQTISREVQPEDSVIHVRGVAFGGSRMLDITVDEQSAGRADAVYADPFYLPA RAYTGWDTGKGRAQETDMKDSLQRLHEAGKPVLVRIRDVRQIEAALAAEADILYLGGELM DNRALQDEVGRLNTPVVLCKDKHHRADDWLVAAEHIAQRGNRHVILGEAGTLSFEPEHTR RLDVDAIVRVRRASHLPVIVNITRLWHNDMPQNVLYRLAVAAGANGVISSLK >gi|289656349|gb|ADEA01000018.1| GENE 29 29148 - 31265 3023 705 aa, chain + ## HITS:1 COG:NMB1693 KEGG:ns NR:ns ## COG: NMB1693 COG2982 # Protein_GI_number: 15677541 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized protein involved in outer membrane biogenesis # Organism: Neisseria meningitidis MC58 # 9 702 9 701 704 617 47.0 1e-176 MIRLLHSGKFWLKLAAFCILAAILATIGLNVLLHHVFSTDQVRRHTEAFIRKTGRTINFD RSVGRSLLPRPTLTLKNVVISTPDGNHPAILIRETKIGFAWSALWSDNAPIEKWVVSGAD TTLEQTPDGWNLQDLWQQPAGSTPNRLIIESSRIDVRLPQGSYKIENFGLNTQRPEAGGR PFKINGTLQHDTLPLRWQGNGIWRTSGGNWETPSFHLEAAGRLNDHTLTVSTDSALLWQP QSSTLQARNFNLRADSSFHNLHLTAQSPLITLRNNHLSLNALSSAFTAGTSESRWDGSLE LDKVSLRPSIAVLDNFKFNAGHKTEQQYTTFTLSGPAIWQRSKGAFSDGLRINTHQDTLI KAPRPRFISAFEGSFSMPDLNHWQGQFKGLFDRQPAALTVRYAAEPEQQPRLEAGIALSK LSLTPYWDDLQTHSGKAYPGFLSRSGAPTIEAQIKIDAITLPGLQLDNVETLLSADKDHI ALSNFKAGLYGGKTEGGISMANTEPPSYHLQQNAQGVQVRRLLQDLLTVNSISGTGDAVI DLTARGQDRTSLTKTLKGTLTLNVSNGAWLGIDIDNIMQSGTISRRGHNGEIPRTPFRRF SLTSTIDQGISRHFNTEVTSDSLLIVSNGFTDLGKQELSEEMLIRNARNPKAKPIPLKIN GPINNPSITIDYSRLTNGLSTPAEKQKALENTLKEQWQWLNPNRE >gi|289656349|gb|ADEA01000018.1| GENE 30 31551 - 32453 1146 300 aa, chain - ## HITS:1 COG:NMA0601 KEGG:ns NR:ns ## COG: NMA0601 COG0583 # Protein_GI_number: 15793591 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Neisseria meningitidis Z2491 # 1 293 1 293 299 356 60.0 4e-98 MKTHSDELAVFVQVVESGSFSRAAERLGLANSAVSRTVKRLEDKLSANLLNRTTRQLRLT EEGCRFFERARQILHDIEAAETEILSAGGAPQGVLRVDSATPTLLHLVAPLVRPFCERHP QVSLLLTSSEGYIDLIERRVDIAIRAGSLHDSALRARHLFDSRLKLVAAPDYLARRGTPQ TVADLSQHTLIGFSEPKTLNNWPFADTGHTPYAAVPQLSANSGETIRRLCLEGNGIACLS DFTAAADIAAGHLHELLPDRALNEAKPFYAVYYGDNAVSPKIRAFVDFFAEQLERKALKI >gi|289656349|gb|ADEA01000018.1| GENE 31 32556 - 33146 834 196 aa, chain + ## HITS:1 COG:HI0648 KEGG:ns NR:ns ## COG: HI0648 COG2249 # Protein_GI_number: 16272591 # Func_class: R General function prediction only # Function: Putative NADPH-quinone reductase (modulator of drug activity B) # Organism: Haemophilus influenzae # 1 194 17 208 208 315 77.0 3e-86 MNILLIDGGQHFGHSAGRLNHTLHQTARDTLTALGHAVKETVIEEGYDKDAEVEKWLWMD AVVWQMPGWWMGEPWTVKKYIDEVFTAGVGENKLVANDGRHRVNPTEGYGTGGLLHGKKH MISSTWNAPIEAFTREGDFFEGAGVDGVYLHFHKANEFLGTTRLPSFICNDVIKNPQVEQ YLADYRTHLEKVFGRG >gi|289656349|gb|ADEA01000018.1| GENE 32 33257 - 33781 574 174 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229255399|ref|ZP_04379326.1| acetyltransferase, ribosomal protein N-acetylase [Capnocytophaga ochracea DSM 7271] # 1 173 1 173 175 225 62 3e-58 METRKISRLILRPWALTDAEAVYEQARNPKIGAMCGWPPHTGVAESREIIEHVLCKPHSF AICLEDNKAIGSISLLFQNDSNLPMSDREAEIGYWLGEDFWGKGYATEAVQSVVAYAFEE LSLVRLWGGTYQENTPSQRVLEKCGFYPHHTEEHFFSKPTGETHRAVIYALEKA >gi|289656349|gb|ADEA01000018.1| GENE 33 33875 - 35353 2086 492 aa, chain - ## HITS:1 COG:NMA1952 KEGG:ns NR:ns ## COG: NMA1952 COG0043 # Protein_GI_number: 15794835 # Func_class: H Coenzyme transport and metabolism # Function: 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases # Organism: Neisseria meningitidis Z2491 # 1 492 1 492 492 986 98.0 0 MKYKDLRDFIAMLEQQGKLKRIAHPVSPHLEMTEIADRVLRAEGPALLFENPIKPDGTRY DYPVLANLFGTPERVAMGMGADSVSKLREIGQTLAYLKEPEPPKGIKDAFSKLPLLKDIW SMAPNVVKNAPCQEIVWEGEDVDLYQLPIQHCWPEDVAPLVTWGLTVTRGPHKKRQNLGI YRQQLIGKNKLIMRWLSHRGGALDYQEFRKLNPDTPYPVAVVLGCDPATILGAVTPVPDT LSEYQFAGLLRGSRTELVKCIGNDLQVPARAEIVLEGVIHPNETALEGPYGDHTGYYNEQ DHFPVFTVERITMRENPIYHSTYTGKPPDEPAVLGVALNEVFVPLLQKQFPEITDFYLPP EGCSYRMAVVSMKKQYAGHAKRVMMGCWSFLRQFMYTKFIIVVDDDVNVRDWKEVIWAVT TRMDPVRDTVLVENTPIDYLDFASPVSGLGGKMGLDATNKWPGETDREWGRVIKKDPAVT AKIDEIWGELGL >gi|289656349|gb|ADEA01000018.1| GENE 34 35545 - 35658 76 37 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTGNVFYKSRHYTPFDPARRLASLPFCATIRPYLGAS >gi|289656349|gb|ADEA01000018.1| GENE 35 36008 - 36526 530 172 aa, chain + ## HITS:1 COG:no KEGG:NMC1583 NR:ns ## KEGG: NMC1583 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 27 171 7 156 158 71 32.0 1e-11 MATFSKLLLISATIALTACANSGHSSSADAGGNHTSATTATNSSSACRSIGEGRKINNKG QNDGYMCKANTALSSEEAKSVLDPNIRVSYGNTSGATLTSRQVANAVGKSPDETCQRAFL SAVKRFQSTAQRRNKHAVQVVSYFDKRTVGGSEYECHIGTWNSRVVLKGSIN >gi|289656349|gb|ADEA01000018.1| GENE 36 36608 - 37225 558 205 aa, chain + ## HITS:1 COG:no KEGG:Bpet4372 NR:ns ## KEGG: Bpet4372 # Name: not_defined # Def: 4'-phosphopantetheinyl transferase, fragment (EC:2.7.8.-) # Organism: B.petrii # Pathway: not_defined # 10 182 6 187 220 94 39.0 3e-18 MTDRILRCLLGDPLLAASYRNNSLNLHDRHRIEHAPQLAERTDWKVSRALKQLADSPVVS LSHSKGFAALLCTDYPIPAGVDLEAVRPRDFRSLSEWVCTAEEQEYLCRHNWQAEIFYRL WCTKEALLKAAGLNFPADMANVGYRFYGNEVGGLRVPHQNGWHGITARLTPDFTLACVWR GEDVRIDWLFYGDLNVDSLGKLEAV >gi|289656349|gb|ADEA01000018.1| GENE 37 37283 - 38518 1603 411 aa, chain - ## HITS:1 COG:NMB1703 KEGG:ns NR:ns ## COG: NMB1703 COG0304 # Protein_GI_number: 15677551 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: 3-oxoacyl-(acyl-carrier-protein) synthase # Organism: Neisseria meningitidis MC58 # 1 404 2 414 416 553 71.0 1e-157 MNTRRVVVTGIGGITAFGRDWQSIQAAFKAEKNAVKYMDWRERFPELEAQLGAPIEGYTP PEHWTRKQLRSMGRVSHLCVDAAEQALTDAGLLGDESITDGRMGVACGSSVGSTKDIGDM GELLNTGTSRNFNANTYVRMMPHTTAANIGIFFGLKGRIIPTSSACSSGSQGIGYAYEAI KYGMIDMMLAGGGEEFCPSEVYVFDSLYAASRRNGEPELTPRPYDNGRDGLVIGEGAGIF VLEELEHAKRRGAKIYAELVGYGANSDGSHVTQPQKETMQKCMELALQDAGITPDKVGYV SGHGTATEKGDIAETLATEAVFGFIPMSSQKSYLGHTLGACGALEAWFTIEMMNSGWFAP TVNLNDIDPRCGKVDYILSGGREIETDYVVSNNFAFGGVNTSLVFKRWQAY >gi|289656349|gb|ADEA01000018.1| GENE 38 38515 - 39243 207 242 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163797523|ref|ZP_02191474.1| 50S ribosomal protein L9 [alpha proteobacterium BAL199] # 1 209 3 211 259 84 31 1e-15 MTETILITGSNRGIGKAVALGLAEDGFDIVLHCRSRRDEAEAVAEEIRALGRQARVLQFD VSDRAACRDILTADIEANGAYYGVVLNAGLTRDNAFPAFSDDDWDLVLRTNLDGFYNVLH PLTMPMIRRRKAGRIVCMASVSGLTGNRGQVNYSASKAGLIGAAKALAVELAKRKITVNC VAPGLIDTEIVDENVPVEEILKAIPAARMGLPEEVAHAVRFLMDEKAAYITRQVIAVNGG LC >gi|289656349|gb|ADEA01000018.1| GENE 39 39534 - 39854 186 106 aa, chain - ## HITS:1 COG:NMB1701 KEGG:ns NR:ns ## COG: NMB1701 COG4706 # Protein_GI_number: 15677549 # Func_class: I Lipid transport and metabolism # Function: Predicted 3-hydroxylacyl-(acyl carrier protein) dehydratase # Organism: Neisseria meningitidis MC58 # 1 95 63 157 166 135 66.0 1e-32 MAQSIGAFAGIQALLANEQVKLGFLLGTRRLDLYAENVPIGTKLLATAKVSTQDNNGMGV FDCELRWTDAPEMIKHLLPTDGLLVRAALNVYSPKDAKVGKEKRPS >gi|289656349|gb|ADEA01000018.1| GENE 40 40294 - 40437 60 47 aa, chain + ## HITS:1 COG:NMA0907 KEGG:ns NR:ns ## COG: NMA0907 COG4105 # Protein_GI_number: 15793873 # Func_class: R General function prediction only # Function: DNA uptake lipoprotein # Organism: Neisseria meningitidis Z2491 # 1 46 221 266 267 79 73.0 1e-15 MELAYKKLGKPQLAADSRRILAGNFPASPYLQKPWRPDDMPWWRYWR >gi|289656349|gb|ADEA01000018.1| GENE 41 40543 - 40710 109 55 aa, chain - ## HITS:1 COG:NMB2017 KEGG:ns NR:ns ## COG: NMB2017 COG1555 # Protein_GI_number: 15677842 # Func_class: L Replication, recombination and repair # Function: DNA uptake protein and related DNA-binding proteins # Organism: Neisseria meningitidis MC58 # 1 54 91 148 148 60 60.0 1e-09 AKAIVAYRQQNGQFKTVEDLKKVKGIGEGIFSKLKDEASVAPPAAKKAVPAVKQQ Prediction of potential genes in microbial genomes Time: Thu May 26 13:27:03 2011 Seq name: gi|289656348|gb|ADEA01000019.1| Neisseria sp. oral taxon 014 str. F0314 cont1.19, whole genome shotgun sequence Length of sequence - 25135 bp Number of predicted genes - 23, with homology - 23 Number of transcription units - 15, operones - 8 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - 5S_RRNA 140 - 196 91.0 # AE015927 [R:2797299..2798807] # 5S ribosomal RNA # Clostridium tetani E88 # Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium. 1 1 Tu 1 . + CDS 663 - 1580 185 ## COG2334 Putative homoserine kinase type II (protein kinase fold) + Term 1604 - 1647 13.3 - Term 1589 - 1638 17.9 2 2 Op 1 19/0.000 - CDS 1657 - 3273 1136 ## COG0477 Permeases of the major facilitator superfamily - Term 3285 - 3331 10.3 3 2 Op 2 4/0.125 - CDS 3335 - 4522 889 ## COG1566 Multidrug resistance efflux pump - Prom 4594 - 4653 8.2 4 3 Op 1 2/0.250 - CDS 4881 - 6275 354 ## PROTEIN SUPPORTED gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 5 3 Op 2 . - CDS 6323 - 6817 624 ## COG1846 Transcriptional regulators - Prom 7045 - 7104 6.8 + Prom 7271 - 7330 6.9 6 4 Op 1 3/0.125 + CDS 7381 - 7854 578 ## COG0780 Enzyme related to GTP cyclohydrolase I + Term 7880 - 7930 8.1 7 4 Op 2 . + CDS 7946 - 8632 466 ## COG1738 Uncharacterized conserved protein - Term 8632 - 8683 18.3 8 5 Tu 1 . - CDS 8700 - 9884 1119 ## COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases - Prom 10000 - 10059 7.7 - Term 10110 - 10163 11.6 9 6 Op 1 32/0.000 - CDS 10180 - 10452 456 ## PROTEIN SUPPORTED gi|15676241|ref|NP_273373.1| 50S ribosomal protein L27 10 6 Op 2 . - CDS 10481 - 10801 519 ## PROTEIN SUPPORTED gi|194099559|ref|YP_002002689.1| 50S ribosomal protein L21 - Prom 10845 - 10904 5.6 + Prom 10902 - 10961 5.2 11 7 Op 1 1/0.250 + CDS 11038 - 12012 1099 ## COG0142 Geranylgeranyl pyrophosphate synthase 12 7 Op 2 . + CDS 12037 - 12483 383 ## COG2707 Predicted membrane protein + Term 12509 - 12575 30.0 + TRNA 12491 - 12565 65.4 # Arg CCT 0 0 - Term 12647 - 12684 5.1 13 8 Op 1 16/0.000 - CDS 12707 - 12862 265 ## PROTEIN SUPPORTED gi|15676239|ref|NP_273371.1| 50S ribosomal protein L33 14 8 Op 2 . - CDS 12889 - 13188 479 ## PROTEIN SUPPORTED gi|226727226|ref|YP_002792158.1| 50S ribosomal protein L28 - Prom 13216 - 13275 3.4 - Term 13303 - 13346 7.2 15 9 Tu 1 . - CDS 13361 - 14683 1611 ## COG0739 Membrane proteins related to metalloendopeptidases - Prom 14793 - 14852 5.4 + Prom 15032 - 15091 3.8 16 10 Tu 1 . + CDS 15111 - 16094 951 ## COG4255 Uncharacterized protein conserved in bacteria + Term 16130 - 16168 10.2 - Term 16118 - 16156 10.2 17 11 Tu 1 . - CDS 16175 - 16849 201 ## PROTEIN SUPPORTED gi|163756109|ref|ZP_02163225.1| 30S ribosomal protein S1 - Prom 16953 - 17012 2.8 + Prom 16932 - 16991 3.2 18 12 Tu 1 . + CDS 17135 - 17524 641 ## APL_0356 hypothetical protein + Term 17542 - 17587 8.1 + Prom 17568 - 17627 3.3 19 13 Op 1 16/0.000 + CDS 17652 - 18578 383 ## PROTEIN SUPPORTED gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 + Prom 18587 - 18646 4.8 20 13 Op 2 . + CDS 18729 - 21521 4411 ## COG0060 Isoleucyl-tRNA synthetase + Term 21539 - 21580 12.0 - Term 21523 - 21572 17.2 21 14 Op 1 3/0.125 - CDS 21589 - 22758 1618 ## COG2956 Predicted N-acetylglucosaminyl transferase 22 14 Op 2 . - CDS 22760 - 23086 429 ## COG5416 Uncharacterized integral membrane protein - Prom 23280 - 23339 3.1 - Term 23302 - 23340 10.2 23 15 Tu 1 . - CDS 23362 - 25077 2653 ## COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase Predicted protein(s) >gi|289656348|gb|ADEA01000019.1| GENE 1 663 - 1580 185 305 aa, chain + ## HITS:1 COG:NMA0411 KEGG:ns NR:ns ## COG: NMA0411 COG2334 # Protein_GI_number: 15793416 # Func_class: R General function prediction only # Function: Putative homoserine kinase type II (protein kinase fold) # Organism: Neisseria meningitidis Z2491 # 1 304 3 306 307 518 77.0 1e-147 MSVYTSVSEDEIHQFLRQYDLGEFISLQGIAQGITNSNYFLTTSSGRYVLTIFETLKQEE LPFFLRLNRHLSNNGVACPSPISRKDGKLDSSLSGKPACLVTCLKGSDTSWPTPTQCFHT GAMLAKMHIAGQDFPWKMKNPRYDIWWHDSYKRLLPVLSKEDADLLQTEISHLDNNLGNH LPSGIIHADLFKDNVLLDGENVAGFIDFYYACNGNFMYDLAIAVNDWARSSNNKLDISLK DAFISGYESIRPLSIEEKIYFPIAQRAGCIRFWVSRLIDFHFPQSGEITFIKDPNVFRDL LLNLE >gi|289656348|gb|ADEA01000019.1| GENE 2 1657 - 3273 1136 538 aa, chain - ## HITS:1 COG:NMA2168 KEGG:ns NR:ns ## COG: NMA2168 COG0477 # Protein_GI_number: 15795039 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Neisseria meningitidis Z2491 # 31 538 9 516 516 761 78.0 0 MYGLHRQQTIHYSSRIGYVLKACLGNGSIKMAYPPLQGFRLVWVTFSLSLAVFMEVLDTT IANVAVPVIAGDLGAALTQGTWVITSFAVANAISVPLTGFLAKRFGEVRLFIGSVIGFVI MSWLCGIAPNLQLLVLFRILQGFIAGPLIPLSQSLLMASYPLEKRTLALALWAMTVVVAP VLGPILGGWISNNWHWGWIFFINVPIGIVSAVIAWKQLGNRETEIFKTPIDFIGLVLMIV GVGALQMMLDRGKELDWFESNEIIIWGITATVCLIYFIVWELGEKHPVVDLSLFKDRNFT IGVLTTSLGFMVYMGTLTLLPLVLQSNLGYTATWAGLAAAPVGLLPILLSPIIGRFGNRV DMRILVMTSFLVFAFTFYWRTDFYAGMDMKNVVWPQFWQGLGVAMFFLPLTTITLSHMKG EQIASASSLSNFLRVFMGGVGVSIVSTMWERREALHHTQLTEQITPYSEIVRQTVDGMAQ LGSGEEQTLRSINNIITQQGFIIGSNEIFLAGSILFIVMIVIIWGAKPPFGGVSDGRH >gi|289656348|gb|ADEA01000019.1| GENE 3 3335 - 4522 889 395 aa, chain - ## HITS:1 COG:NMA2169 KEGG:ns NR:ns ## COG: NMA2169 COG1566 # Protein_GI_number: 15795040 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Neisseria meningitidis Z2491 # 50 390 52 389 394 390 65.0 1e-108 MSNKQENASVKSGTEALRTDFPYRRKRNLTLVTLLFIIIALGVTLAYFLFWQHEEETEDA YVAGHLVQITPQITGTVRKVMFDDTELVKKGDVLITLDDSDFQLAYDRAQNELIQAIRQN KQQTATNSQAKAQVLLRKADLARAQADLRRRELLSGTDAISGEELSHARAAVVQAQAALK AVEAAETSAQAAIGNNIPLRQQPAVQTAVSRIKDAWLNLQRTQIHAPIAGQVAKRNVQVG QRITQGVPLMAVVPLDNLWVDANFKESQLRKMRIGQSVEMVSDLYGSKVVYHGKVMGLSA GTGSAFSLLPAQNATGNWIKVVQRVPVRISLDPRELRANPLRMGLSMTVKVDISESTGKG MASTAEKGTVLPETDKVDWAVADALIEKIFEKYSK >gi|289656348|gb|ADEA01000019.1| GENE 4 4881 - 6275 354 464 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 [Campylobacter concisus 13826] # 48 464 42 457 460 140 26 6e-33 MKFNIAKWSIGVLTVCTLSACAQFGKQAPLEEPTAYSLSEGKSAVMAKDAWWLQLHDKKL NLLIAQAIQTSPDLRVAKARFDQAQAQLGLTEAATKTQIGFSVRGAGAYVSPKPASRQGE TDNTLLLANAALQGSWEFDFWGKNRNQIASVLGKRQAILYEARQTRIMLANAVAAQYFAW QSLEEQQKLLARRTETADKTLQLMQRRVRAKLMPPESLYQIELLQHRLQLERLSLEQQTA KVRNSLSALTGNAPYTLPVRFPEEMANVPNLPVDRIYADLLAVRPDIAVQKSLLESKYHA IKSTEAEFYPNIELKVLAGMAHIDAFNVIHGRNSAMLGILPALNLPIFTSGALQSKLWGR RAEYNEQVAIYDRTVLNAMRSAADAVVDYQSLQAKKLVWDKMLNTSGKSVRAVQNRVKVG LENGLDVLQKQEERLQLQMQAVQYQAEYLTAWSNLHAQLGGGVK >gi|289656348|gb|ADEA01000019.1| GENE 5 6323 - 6817 624 164 aa, chain - ## HITS:1 COG:STM2813 KEGG:ns NR:ns ## COG: STM2813 COG1846 # Protein_GI_number: 16766124 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 163 1 163 176 92 34.0 3e-19 MSFSQAELVNALRLLSGRLPEFSEQQTQVGRLLRIVTERLSDHLNENLKVLGINENLWFA MMAVYVSPNSEILPSRLSDMMDLTRTSATRLSDEMVERGWVERHINQQDRRQIVLKLTPE GEAFIQKVWPQVSSKSGEAWQDFTNEDYAQLQYLLSKLLNRLEG >gi|289656348|gb|ADEA01000019.1| GENE 6 7381 - 7854 578 157 aa, chain + ## HITS:1 COG:NMB0317 KEGG:ns NR:ns ## COG: NMB0317 COG0780 # Protein_GI_number: 15676234 # Func_class: R General function prediction only # Function: Enzyme related to GTP cyclohydrolase I # Organism: Neisseria meningitidis MC58 # 1 156 1 156 157 283 87.0 6e-77 MSRNTEELGGISLLGNQKTQYPSEYNPSILEAFDNKHPNNDYFVKFICPEFTSLCPITGQ PDFATIHIRYIPSVKMVESKSLKLYLFSFRNHGDFHEDCVNIIMNDLIKLMDPKYIEVCG EFTPRGGIAIHPFANYGKPKTEFETLARERLFKYDAL >gi|289656348|gb|ADEA01000019.1| GENE 7 7946 - 8632 466 228 aa, chain + ## HITS:1 COG:NMA2171 KEGG:ns NR:ns ## COG: NMA2171 COG1738 # Protein_GI_number: 15795042 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 1 219 1 219 228 301 78.0 9e-82 MYHFTQVQQQKALFWLALFHILIIAASNYLVQFPFSIFNIHTTWGAFTFPFIFLATDLTV RIFGSRLARRIIFWVMLPALLLSYVFSVLFSSGNWTGWAALSQFNSFVGRIALASFSAYV FGQILDIFVFTRLRRLKTWWIAPAASTIFGNALDTLMFFSIAFYSGSDEFMAAHWPGIAL VDYLFKLIICTLFFLPAYGVILNILTKKLTALKQSDSENNTLILTQES >gi|289656348|gb|ADEA01000019.1| GENE 8 8700 - 9884 1119 394 aa, chain - ## HITS:1 COG:NMA2164 KEGG:ns NR:ns ## COG: NMA2164 COG0654 # Protein_GI_number: 15795035 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases # Organism: Neisseria meningitidis Z2491 # 1 394 1 394 394 722 89.0 0 MSLQNDILVVGSGPAGLSFAAELAGSGLKVTLVERSPLEVLQNPPYDGREIALTHFTREI MQRLGIWGLIPENEIYPLRDAKVLNGQSDYQLHFPQPTEARGEPADCLGYLISNHNIRKA AYEVVSKLDNVTILAGTGVKEVKTSSDEAQVILENGEVLAGKLLLAADSRFSQTRRQLGI SSDMHDYSRTMFVCRMRHTLSNQHTAYECFHYGRTIALLPLEEYLTNTVITVDSDKAETI KNLSPEELAATVKEQLKGRLGDMELVSTIHNYPLVGMIAQRFYGTRSALIGDAAVGMHPV TAHGFNLGLSSADILAKLVLEAEQRGQDIGASSLLEKYSSKHMLHAQPIYHGTNMLLKLF TNETAPAKLLRGLVLRASNNFPPLKKLITKQLTG >gi|289656348|gb|ADEA01000019.1| GENE 9 10180 - 10452 456 90 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15676241|ref|NP_273373.1| 50S ribosomal protein L27 [Neisseria meningitidis MC58] # 1 90 1 90 90 180 97 9e-45 MASKKAGGSTRNGRDSEAKRLGVKAYGNELIPAGSIIVRQRGTKFHAGDNVGMGKDHTLF AKVDGYVEFKTKGALNRKTVSIRPYTGADE >gi|289656348|gb|ADEA01000019.1| GENE 10 10481 - 10801 519 106 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|194099559|ref|YP_002002689.1| 50S ribosomal protein L21 [Neisseria gonorrhoeae NCCP11945] # 1 106 1 106 106 204 98 5e-52 MELSMYAVVKTGGKQYKVAVGEKLKVEQIPAELDSQIELTEVLMIADGESVKVGAPFIEG AKVTAKVVAHGRGEKVRIFKMRRRKHYQKRQGHRQNFTQIEIVAIA >gi|289656348|gb|ADEA01000019.1| GENE 11 11038 - 12012 1099 324 aa, chain + ## HITS:1 COG:NMA2161 KEGG:ns NR:ns ## COG: NMA2161 COG0142 # Protein_GI_number: 15795032 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Neisseria meningitidis Z2491 # 1 324 1 324 324 528 87.0 1e-150 MLENLPYFKQHLHEDLDKVNVVINQAVKSDVALISQIGTYIISAGGKRLRPIITILAGKA VGYDDEKLYSLAAMVEFIHTSTLLHDDVVDESDLRRGRETANNLFGNAAAVLVGDFLYTR AFQLMVASGSMKILEVMADATNIIAEGEVMQLMNIGNTDITEKQYIQVIQYKTAKLFEAA AQVGAILGGANPAQEQALKDYGMYVGTAFQIIDDVLDYSGETEEIGKNVGDDLAEGKPTL PLIYLMHNGSEQAAKDVRLALENADRSYFEKIHDYVVNSNALPYAINEARKAVEKAVACL DILPDNEITLAMRQLAEESLARVS >gi|289656348|gb|ADEA01000019.1| GENE 12 12037 - 12483 383 148 aa, chain + ## HITS:1 COG:NMA2160 KEGG:ns NR:ns ## COG: NMA2160 COG2707 # Protein_GI_number: 15795031 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis Z2491 # 1 147 1 147 148 148 69.0 3e-36 MHLNVIPLFLVLLILLGVLSNNGSITISATVLLLMQQTALSQYLPLAEKYGVAVGIIFLT VGVLSPLVSGKIQIPSLTAFMNLKMFAAVGIGILVAWIAGRGIPLMSAQPILVTGLLVGT IIGVAFLGGVPVGPLIAAGLLSFFAEKI >gi|289656348|gb|ADEA01000019.1| GENE 13 12707 - 12862 265 51 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15676239|ref|NP_273371.1| 50S ribosomal protein L33 [Neisseria meningitidis MC58] # 1 51 1 51 51 106 100 1e-22 MRDKIKLESSAGTGHFYTTTKNKRTMPGKLEIKKFDPVARKHVVYKETKLK >gi|289656348|gb|ADEA01000019.1| GENE 14 12889 - 13188 479 99 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|226727226|ref|YP_002792158.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae 1291] # 1 99 19 117 117 189 90 2e-47 MNKNCFLWYKPHFTILEVWRLTMARVCKVTGKRPMSGNNVSHANNKTKRRFLPNLQSRRF WVESENRWVRLRISNAALRTIDKVGIDAVLADLRARGEA >gi|289656348|gb|ADEA01000019.1| GENE 15 13361 - 14683 1611 440 aa, chain - ## HITS:1 COG:NMB0315 KEGG:ns NR:ns ## COG: NMB0315 COG0739 # Protein_GI_number: 15676232 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Neisseria meningitidis MC58 # 28 440 18 430 430 494 61.0 1e-139 MTNKNNTSFFDRFWDNKPVRWSLLGILLPVSGVMTAYAVTEPMPRDSGLKVERVLEELPS VYVETGSFQSSYWAQEAVQTGDSLADVLTRMGVAEAEIKQIMAKNNPERNMNQLRAGQSV SIRVNASGQVTDVQFFTDEELERNLVALEKVNGKWQASTSEVDMKTMPTLRSVIVRTSAR GAMAQAEIPVEIRESLSEIFADVLSLEDLKEGDTVRLLYNSMYFRGQQMGTGDILAAEIV KGGKTYQAYYYSQGKGDEESGSYYDQNGKSLQQKEGFNIQPVVYTRISSPYGYRVHPVLH TVRMHTGIDYAAPEGTPIKAAADGVVVFKGWKGGYGNTVMIQHANGVETLYGHMSAFSPS QGKVSAGEIIGYVGTTGRSTGPHLHYEARVNGQPVNPTTVALPTPKLTPTNMAAFRKQQQ EANATLAAVRGLPVSVAQLD >gi|289656348|gb|ADEA01000019.1| GENE 16 15111 - 16094 951 327 aa, chain + ## HITS:1 COG:NMA2173 KEGG:ns NR:ns ## COG: NMA2173 COG4255 # Protein_GI_number: 15795044 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 327 1 322 322 271 44.0 1e-72 MNLTLAIPSLNRCGDENPPPLDLPSFDEILRFGTLTRAAAAPSELYRRFLWQGSLLDAAK QKSGIAAEQAAVFASPVWQQMGIHQVSVIDGAYIQIQTDEAERLCGGLTEFYRHEGWQFH PLRPDLWLVTLPRRPAWHTAPVFDICGPNGDVSQAGGEDALQWLGRQTEIQMYLHNHPVN TERTAQKIPAVNGLWLWQDLEGTQSARPLLSSDCAWADFYLGERTGAPYDFEAWQVILNE AGATFSDGLIFLDDLVVTGQTGDTWAYRDILESWETRWFAPLRQALDSGRLKSLTIVTDG ENGGSLQIRPHSKRAFWKRKRKFNGIW >gi|289656348|gb|ADEA01000019.1| GENE 17 16175 - 16849 201 224 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163756109|ref|ZP_02163225.1| 30S ribosomal protein S1 [Kordia algicida OT-1] # 109 210 243 344 347 82 37 3e-15 MNILKPLTVAVLAAPLALAGCVTDPVTGQQSASKTAVYGLGGAAVCGIVGALTHGGKGAR NSALACGAIGAGVGGYMDYQAKKLRESLANTDVKVEQQGNQIKLVMPENVTFATNSATLS ANARDALTAASKTLVQYPDTTLTINGHTDNTGSDAINDPLSRNRAQSVASFLQSQGVAGS RLTTAGHGSRQPVASNATPEGRAQNRRVEILINPDQNAIKAAQQ >gi|289656348|gb|ADEA01000019.1| GENE 18 17135 - 17524 641 129 aa, chain + ## HITS:1 COG:no KEGG:APL_0356 NR:ns ## KEGG: APL_0356 # Name: not_defined # Def: hypothetical protein # Organism: A.pleuropneumoniae # Pathway: not_defined # 16 114 16 112 128 74 48.0 8e-13 MNVLHTVLILSAAAALTACATTPEQKAARAAAQKRYEQNLQISLAAQCDKATAELMRQQF EQADNPAPPTAKQKEFRLKYVDKVSDPMFQACYKMAWQNYIAQQQLREARYYYDDWGFYH PFYRPPFWW >gi|289656348|gb|ADEA01000019.1| GENE 19 17652 - 18578 383 308 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 [Bacillus selenitireducens MLS10] # 18 304 19 309 317 152 34 3e-36 MKICLGQANAPDFPQGAAVTIGNFDGVHLGHKHILQKLKHEADLRGLPVAVVIFEPQPKE FFARKAGKKLPYRISPLRTKLRLLRETGCVDAVWVLRFDQSFADMTAQTFIDRLLRRTLN TRYLLIGDDFRFGAGREGCFELLSQQPDIQTERTPSVIVEDIRTSSTAVRQALSDGLLEY AKKLLGHDYVLSGKVKHGQKLGRTINAPTANIQLPPYHYALSGVFVVEADGAFGTRRGVA SFGFNPTVSNNRSQKLEVHLFDFDGDLYGQRIFVRFLHKLRDEQKFDSIEELKTQILQDM DDARRWRQ >gi|289656348|gb|ADEA01000019.1| GENE 20 18729 - 21521 4411 930 aa, chain + ## HITS:1 COG:NMA0622 KEGG:ns NR:ns ## COG: NMA0622 COG0060 # Protein_GI_number: 15793612 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Isoleucyl-tRNA synthetase # Organism: Neisseria meningitidis Z2491 # 1 930 1 929 929 1834 94.0 0 MTDYSKTVNLLESPFPMRGNLAKREPAWLKSWYEHKRYQKLREIAKGRPKFILHDGPPYA NGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPIEVMVEKLHGKDMPKARFR ELCREYAAEQVARQKKDFIRLGVLGDWDNPYLTMDFKTEADTVRMLGEIYKSGYLYRGAK PVQFCLDCGSSLAEAEVEYKDKVSPAIDVGYPFKDIAALAAAFGLSGIEGKAFAVIWTTT PWTLPASQAVSAGADVVYQLIDTPKGKLVLAKDLAEDALKRYGFTSDDLKVLAETTGDKL ENLHMNHPFLERDIPMLNGEHVTTDAGTGLVHTAPAHGLEDYAVCNKYGIELYNPVNAEG KYISETPRVAGMSVWEANPVILQWLEETGNLLASSKIEHSYAHCWRHKTPLIYRATGQWF IGMDKAGSDGKTLRDKAIKAVDDTEFFPSWGRARLEAMIEGRPDWVVSRQRYWGTPMTFF VHKETGELHPNSAELLEKIALKIEEKGIEAWFSLDKSELLSAEDCENYDKLSDTMDVWFD SGSTHYSVLKQREELDWPADLYLEGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHGFVV DQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEILKRVTESYRRIR NTLSFLFANLSDFDPFEHTVPQADMVEIDRYALVLARQLQERLAGDFYPRYAFHFAVKDI VAFCSEDLGAFYLDILKDRLYTTKADSHARRSAQTALYHITRSLVLLIAPILCFTGEEAW DIIGGGEEDSVLFHTWHEFPPINEKAEAELVKKWTAVRETREAVTAAIEPLRADKTVGSS LQAEAEITAPEATADYLNALGEELRFALLVSKVEVKTGSELAVTAKASDGKKCERCWHYT HDIGTVAGHETICKRCAENVDGKGEERHYA >gi|289656348|gb|ADEA01000019.1| GENE 21 21589 - 22758 1618 389 aa, chain - ## HITS:1 COG:NMB0339 KEGG:ns NR:ns ## COG: NMB0339 COG2956 # Protein_GI_number: 15676254 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted N-acetylglucosaminyl transferase # Organism: Neisseria meningitidis MC58 # 1 389 1 389 389 667 85.0 0 MENEIWVILLPIILLPVFFAMGWFAARIDMKTVLKQAKSVPTGFYKSLDALVDRNSGRAA RELAEVIDQQPQSYDLNLTLGKLYRQRGENDKAINMHRALLDSPDTVDDKRERVLFELAQ NYQSAGLVDRAEQIFLELLGGNMAREARQHLMSIYQQDRDWVKAIEMAQLLSHDEQTYQF EIAQFYCELAQAALFKSDLETARGNVRKALDANKKCTRANMILGDIESKQGDFPAAVAAY GAIEQQNHAYLSMVGEKLYDAYAAQEKQEEGLNVLIGYMETFPDLDLINVIYEKSLLLKG EGPAAETAVELVRRKPDLNGVYRLLGLKLSDMNPAWKADADMMRAVVGRQLQKSVMYRCR NCHFKSQVFFWHCPACNKWETFTPNRIEV >gi|289656348|gb|ADEA01000019.1| GENE 22 22760 - 23086 429 108 aa, chain - ## HITS:1 COG:NMB0338 KEGG:ns NR:ns ## COG: NMB0338 COG5416 # Protein_GI_number: 15676253 # Func_class: S Function unknown # Function: Uncharacterized integral membrane protein # Organism: Neisseria meningitidis MC58 # 1 96 57 156 160 94 58.0 4e-20 MKIFFLIIKVLIFLVFLLLAVSNIQTVEFNYLPGQGMQMPLVAVLFGAFVIGVLLGMFAL FGRLLSLRSENNRLRNELKKNARMVTAAPQAKLPDNAAPAPAGTAAKE >gi|289656348|gb|ADEA01000019.1| GENE 23 23362 - 25077 2653 571 aa, chain - ## HITS:1 COG:NMA2084_2 KEGG:ns NR:ns ## COG: NMA2084_2 COG4230 # Protein_GI_number: 15794959 # Func_class: C Energy production and conversion # Function: Delta 1-pyrroline-5-carboxylate dehydrogenase # Organism: Neisseria meningitidis Z2491 # 1 571 194 764 764 896 81.0 0 MLAVREAGKTLNNAIAEVREAVDFCRYYADEAEHTLPQGSQGVGTIVAISPWNFPLAIFT GEVVAALAAGNTVVAKPAEQTSLIAGYAVSLMHEAGIPTSALQLVLGAGDVGAALTQDPR IGGVIFTGSTEVARLINQTLAKRDDSPVLIAETGGQNAMIVDSTALAEQVCADVLNSAFD SAGQRCSALRILCVQEDVADHMVKMIKGAMDELVVGNPIALDTDIGPVIDTEAQQNLLAH INRMKGIAKSYHEIRPSENVNPDNATFVAPIMFELNGLGELQREVFGPVLHVVRYPADGL DKLIDQINGKGYALTHGVHSRIDGTVEHIRSRIESGNVYVNRNIVGAVVGVQPFGGHGLS GTGPKAGGSFYLQRLSRLKEWTAPTLSKIGQVDEDALKRLETLLHGLPLPQSEKMAAAAS LGQSRVRTLRKAESVLSGPTGERNVLSWHAPARVWLYGGSLAASFTALVSLASAGVQAVV LPDHPLAAYADRLDGLLAVTDKPEAAGISHVAALEPLPSARKQVLANRDGALVRILPSEN GLDILQVFEEISCSINTTAAGGNASLMAMAD Prediction of potential genes in microbial genomes Time: Thu May 26 13:27:46 2011 Seq name: gi|289656347|gb|ADEA01000020.1| Neisseria sp. oral taxon 014 str. F0314 cont1.20, whole genome shotgun sequence Length of sequence - 131150 bp Number of predicted genes - 125, with homology - 122 Number of transcription units - 75, operones - 30 average op.length - 2.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 1907 - 1961 14.7 2 2 Tu 1 . - CDS 1964 - 3490 1916 ## COG0591 Na+/proline symporter - Prom 3544 - 3603 2.2 + Prom 3830 - 3889 12.1 3 3 Op 1 . + CDS 3910 - 4860 1464 ## NMCC_0601 adhesin MafA2 4 3 Op 2 . + CDS 4864 - 6651 1604 ## NGO1392 MafB3 5 3 Op 3 . + CDS 6648 - 6977 265 ## NMB0656 hypothetical protein + Term 7014 - 7061 6.5 6 4 Op 1 . + CDS 7126 - 7794 483 ## NMO_1664 putative adhesin MafB 7 4 Op 2 . + CDS 7801 - 8070 279 ## NMO_1665 hypothetical protein + Term 8254 - 8295 -0.6 8 5 Tu 1 . + CDS 8574 - 8927 206 ## NMO_0539 hypothetical protein + Prom 9299 - 9358 2.0 9 6 Tu 1 . + CDS 9392 - 9895 260 ## NGO1386 hypothetical protein + Prom 10012 - 10071 3.9 10 7 Tu 1 . + CDS 10108 - 10380 180 ## NMC1798 hypothetical protein + Term 10416 - 10460 10.0 + Prom 10440 - 10499 1.6 11 8 Tu 1 . + CDS 10550 - 11086 243 ## NMC0605 hypothetical protein + Term 11150 - 11195 4.5 + Prom 11167 - 11226 2.1 12 9 Tu 1 . + CDS 11251 - 11532 226 ## NMCC_1774 hypothetical protein + Term 11549 - 11595 5.0 + Prom 11548 - 11607 3.2 13 10 Tu 1 . + CDS 11665 - 12210 114 ## NMC0604 hypothetical protein + Term 12234 - 12280 6.8 + Prom 12254 - 12313 1.7 14 11 Op 1 . + CDS 12349 - 12705 94 ## NGK_1627 hypothetical protein 15 11 Op 2 . + CDS 12702 - 13121 268 ## NMCC_0605 hypothetical protein + Term 13189 - 13219 -0.9 + Prom 13256 - 13315 2.3 16 12 Tu 1 . + CDS 13339 - 13566 261 ## NMC1792 hypothetical protein + Term 13579 - 13626 8.1 + Prom 13617 - 13676 1.7 17 13 Tu 1 . + CDS 13699 - 14241 230 ## NMC1793 hypothetical protein + Term 14338 - 14383 0.5 + Prom 14321 - 14380 1.6 18 14 Tu 1 . + CDS 14400 - 15560 696 ## NGK_1901 hypothetical protein + Term 15572 - 15602 0.2 - Term 15599 - 15631 -0.9 19 15 Op 1 17/0.000 - CDS 15644 - 17083 1277 ## COG0297 Glycogen synthase - Prom 17157 - 17216 1.8 - Term 17134 - 17187 12.7 20 15 Op 2 . - CDS 17222 - 18532 1180 ## COG0448 ADP-glucose pyrophosphorylase - Prom 18706 - 18765 4.9 - Term 18871 - 18913 8.4 21 16 Op 1 . - CDS 18935 - 20347 1781 ## COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) - Prom 20386 - 20445 5.1 22 16 Op 2 21/0.000 - CDS 20447 - 21505 1353 ## COG0477 Permeases of the major facilitator superfamily 23 16 Op 3 . - CDS 21459 - 21875 369 ## COG0477 Permeases of the major facilitator superfamily - Prom 21897 - 21956 5.8 - Term 21919 - 21982 3.7 24 17 Tu 1 . - CDS 22036 - 22758 1075 ## COG3201 Nicotinamide mononucleotide transporter - Prom 22813 - 22872 5.4 + Prom 22846 - 22905 4.8 25 18 Tu 1 . + CDS 22939 - 23505 1140 ## COG0431 Predicted flavoprotein + Term 23525 - 23566 11.3 + Prom 23571 - 23630 3.4 26 19 Op 1 . + CDS 23669 - 24409 912 ## NGO1349 hypothetical protein 27 19 Op 2 4/0.105 + CDS 24406 - 25164 1049 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase 28 19 Op 3 4/0.105 + CDS 25161 - 25421 585 ## COG0236 Acyl carrier protein 29 19 Op 4 3/0.105 + CDS 25435 - 25686 677 ## COG0236 Acyl carrier protein 30 19 Op 5 . + CDS 25759 - 26298 781 ## COG4648 Predicted membrane protein + Prom 26513 - 26572 5.0 31 20 Op 1 . + CDS 26598 - 26903 212 ## gi|298369501|ref|ZP_06980818.1| conserved hypothetical protein 32 20 Op 2 . + CDS 26916 - 28670 1990 ## COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases + Prom 28724 - 28783 4.0 33 21 Op 1 7/0.105 + CDS 28825 - 29913 1437 ## COG0500 SAM-dependent methyltransferases 34 21 Op 2 . + CDS 29928 - 30662 822 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 35 21 Op 3 2/0.211 + CDS 30659 - 31588 1151 ## COG4261 Predicted acyltransferase 36 21 Op 4 . + CDS 31641 - 32078 527 ## COG0824 Predicted thioesterase 37 21 Op 5 . + CDS 32125 - 32715 863 ## D11S_0531 outer membrane lipoprotein carrier protein LolA + Prom 33161 - 33220 7.5 38 22 Op 1 . + CDS 33247 - 34167 1289 ## NT05HA_1736 dialkylrecorsinol condensing enzyme 39 22 Op 2 . + CDS 34205 - 34624 697 ## CCV52592_1561 hypothetical protein 40 23 Op 1 . + CDS 34740 - 34985 381 ## BF3096 hypothetical protein 41 23 Op 2 . + CDS 35065 - 36222 1508 ## COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III 42 23 Op 3 . + CDS 36250 - 36648 721 ## NT05HA_1738 hypothetical protein + Prom 36689 - 36748 5.5 43 24 Tu 1 . + CDS 36776 - 37768 1069 ## NT05HA_1739 hypothetical protein + Prom 37772 - 37831 1.8 44 25 Op 1 45/0.000 + CDS 37877 - 38791 356 ## PROTEIN SUPPORTED gi|225084369|ref|YP_002657150.1| ribosomal protein S16 45 25 Op 2 . + CDS 38788 - 40041 1934 ## COG0842 ABC-type multidrug transport system, permease component + Term 40068 - 40112 10.0 - Term 40367 - 40406 1.6 46 26 Tu 1 . - CDS 40432 - 40953 374 ## gi|298369514|ref|ZP_06980831.1| hypothetical protein HMPREF9016_01952 - Term 40969 - 41012 6.0 47 27 Op 1 . - CDS 41037 - 42134 628 ## gi|298369515|ref|ZP_06980832.1| hypothetical protein HMPREF9016_01953 48 27 Op 2 . - CDS 42171 - 42572 299 ## gi|298369516|ref|ZP_06980833.1| conserved hypothetical protein - Prom 42604 - 42663 6.0 - Term 42818 - 42867 4.1 49 28 Tu 1 . - CDS 42942 - 43166 190 ## gi|298369517|ref|ZP_06980834.1| hypothetical protein HMPREF9016_01955 50 29 Op 1 . + CDS 43262 - 43552 483 ## NT05HA_1742 acyl-carrier protein 51 29 Op 2 . + CDS 43549 - 44583 1018 ## COG0304 3-oxoacyl-(acyl-carrier-protein) synthase 52 29 Op 3 . + CDS 44565 - 45332 707 ## NT05HA_1744 hypothetical protein + Term 45459 - 45495 8.9 - Term 45447 - 45483 8.9 53 30 Op 1 . - CDS 45503 - 46831 527 ## PROTEIN SUPPORTED gi|16079597|ref|NP_390421.1| hypothetical protein BSU25430 - Term 46870 - 46901 2.1 54 30 Op 2 . - CDS 46979 - 47362 582 ## gi|298369522|ref|ZP_06980839.1| conserved hypothetical protein - Prom 47397 - 47456 6.1 + Prom 47475 - 47534 4.2 55 31 Tu 1 . + CDS 47590 - 48882 2056 ## COG0001 Glutamate-1-semialdehyde aminotransferase + Term 48896 - 48951 13.1 - Term 48892 - 48931 10.0 56 32 Tu 1 . - CDS 48955 - 51168 3309 ## COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases - Prom 51248 - 51307 3.9 + Prom 51205 - 51264 4.2 57 33 Tu 1 . + CDS 51400 - 52050 1043 ## COG2999 Glutaredoxin 2 + Term 52071 - 52117 16.1 - Term 51973 - 52024 -0.0 58 34 Op 1 . - CDS 52107 - 53006 1366 ## COG2962 Predicted permeases 59 34 Op 2 . - CDS 53050 - 54420 2040 ## COG0513 Superfamily II DNA and RNA helicases - Prom 54511 - 54570 2.4 - Term 54572 - 54618 14.2 60 35 Tu 1 . - CDS 54655 - 55431 781 ## COG2186 Transcriptional regulators + Prom 56123 - 56182 4.2 61 36 Tu 1 . + CDS 56308 - 56589 354 ## gi|298369529|ref|ZP_06980846.1| conserved hypothetical protein + Term 56634 - 56680 16.1 - Term 56751 - 56817 21.1 62 37 Op 1 9/0.053 - CDS 56829 - 58268 589 ## PROTEIN SUPPORTED gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 63 37 Op 2 27/0.000 - CDS 58322 - 61555 4579 ## COG0841 Cation/multidrug efflux pump 64 37 Op 3 . - CDS 61567 - 62841 1352 ## COG0845 Membrane-fusion protein - Prom 63005 - 63064 8.1 + Prom 63003 - 63062 13.0 65 38 Tu 1 . + CDS 63105 - 63743 679 ## COG1309 Transcriptional regulator + Term 63757 - 63810 9.1 - Term 63749 - 63793 13.1 66 39 Op 1 4/0.105 - CDS 63812 - 64330 666 ## COG3265 Gluconate kinase 67 39 Op 2 . - CDS 64355 - 65740 2174 ## COG2610 H+/gluconate symporter and related permeases - Prom 65764 - 65823 2.2 + Prom 65889 - 65948 3.1 68 40 Op 1 6/0.105 + CDS 66105 - 66614 719 ## COG0597 Lipoprotein signal peptidase 69 40 Op 2 . + CDS 66630 - 67598 438 ## PROTEIN SUPPORTED gi|227371337|ref|ZP_03854821.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SSU ribosomal protein S1P - Term 67605 - 67651 14.8 70 41 Tu 1 . - CDS 67677 - 68582 1247 ## COG0524 Sugar kinases, ribokinase family - Prom 68679 - 68738 3.2 - Term 68860 - 68907 -0.3 71 42 Op 1 . - CDS 68984 - 69787 1069 ## COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain 72 42 Op 2 . - CDS 69723 - 70850 1117 ## COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain + Prom 70811 - 70870 3.6 73 43 Op 1 1/0.263 + CDS 70904 - 71776 1372 ## COG2354 Uncharacterized protein conserved in bacteria 74 43 Op 2 2/0.211 + CDS 71831 - 73372 2337 ## COG0815 Apolipoprotein N-acyltransferase + Term 73391 - 73439 8.1 + Prom 73468 - 73527 4.7 75 44 Tu 1 . + CDS 73676 - 74539 1568 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) + Term 74560 - 74614 12.6 + Prom 74619 - 74678 5.2 76 45 Tu 1 . + CDS 74709 - 75962 1905 ## COG0373 Glutamyl-tRNA reductase + Term 75980 - 76030 6.6 77 46 Tu 1 . + CDS 76081 - 77025 1169 ## COG1518 Uncharacterized protein predicted to be involved in DNA repair + Term 77219 - 77266 1.2 + Prom 77089 - 77148 4.7 78 47 Tu 1 . + CDS 77364 - 80723 3970 ## COG1203 Predicted helicases + Term 80824 - 80871 1.0 - Term 80951 - 81002 2.2 79 48 Tu 1 . - CDS 81033 - 81509 419 ## gi|260424756|ref|ZP_05778997.1| conserved hypothetical protein - Prom 81574 - 81633 3.5 + Prom 82325 - 82384 9.0 80 49 Op 1 . + CDS 82415 - 82645 244 ## 81 49 Op 2 . + CDS 82676 - 84028 1455 ## APL_0218 hypothetical protein 82 49 Op 3 . + CDS 84025 - 84996 1146 ## APL_0217 hypothetical protein 83 49 Op 4 . + CDS 85012 - 86013 1791 ## APJL_0217 CRISPR-associated protein 84 49 Op 5 . + CDS 86017 - 86586 773 ## PM0308 hypothetical protein 85 50 Tu 1 . - CDS 87414 - 87665 219 ## 86 51 Op 1 . + CDS 87915 - 88193 142 ## 87 51 Op 2 . + CDS 88263 - 88790 113 ## CV_1749 hypothetical protein 88 52 Tu 1 . + CDS 89500 - 89994 468 ## COG1495 Disulfide bond formation protein DsbB + Term 90030 - 90068 10.2 - Term 90229 - 90265 8.9 89 53 Tu 1 . - CDS 90284 - 93136 4670 ## COG1003 Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain - Prom 93214 - 93273 4.2 + Prom 93173 - 93232 4.1 90 54 Op 1 11/0.053 + CDS 93399 - 93935 815 ## COG1778 Low specificity phosphatase (HAD superfamily) 91 54 Op 2 12/0.053 + CDS 93932 - 94513 656 ## COG3117 Uncharacterized protein conserved in bacteria 92 54 Op 3 19/0.000 + CDS 94494 - 95021 823 ## COG1934 Uncharacterized protein conserved in bacteria 93 54 Op 4 17/0.000 + CDS 95115 - 95849 266 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Prom 95896 - 95955 1.9 94 54 Op 5 11/0.053 + CDS 96047 - 97408 1891 ## COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog 95 54 Op 6 . + CDS 97464 - 97778 269 ## PROTEIN SUPPORTED gi|56477354|ref|YP_158943.1| sigma 54 modulation protein / S30EA ribosomal protein + Term 97811 - 97868 24.6 - Term 97781 - 97809 1.0 96 55 Op 1 . - CDS 97873 - 98580 834 ## COG0518 GMP synthase - Glutamine amidotransferase domain 97 55 Op 2 3/0.105 - CDS 98612 - 99322 542 ## COG0313 Predicted methyltransferases 98 55 Op 3 . - CDS 99377 - 99967 610 ## COG0424 Nucleotide-binding protein implicated in inhibition of septum formation - Prom 99995 - 100054 4.0 + Prom 99942 - 100001 4.2 99 56 Op 1 20/0.000 + CDS 100021 - 100518 563 ## COG1399 Predicted metal-binding, possibly nucleic acid-binding protein 100 56 Op 2 2/0.211 + CDS 100570 - 100749 307 ## PROTEIN SUPPORTED gi|15677742|ref|NP_274905.1| 50S ribosomal protein L32 + Term 100770 - 100816 0.2 + Prom 100758 - 100817 1.5 101 57 Tu 1 . + CDS 100923 - 101450 692 ## COG2236 Predicted phosphoribosyltransferases + Prom 101480 - 101539 2.7 102 58 Op 1 16/0.000 + CDS 101632 - 102699 1416 ## COG0416 Fatty acid/phospholipid biosynthesis enzyme + Prom 102821 - 102880 3.0 103 58 Op 2 . + CDS 102914 - 103876 1408 ## COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III + Term 103889 - 103959 26.4 + Prom 103934 - 103993 6.2 104 59 Op 1 . + CDS 104093 - 105187 1018 ## DNO_0162 cold-shock DNA-binding domain-containing protein 105 59 Op 2 . + CDS 105145 - 105333 227 ## gi|288575353|ref|ZP_05976785.2| cold-shock domain protein 106 59 Op 3 2/0.211 + CDS 105342 - 106268 1404 ## COG0331 (acyl-carrier-protein) S-malonyltransferase 107 60 Tu 1 . + CDS 106691 - 108541 250 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 + Prom 108543 - 108602 5.4 108 61 Op 1 . + CDS 108629 - 109471 431 ## COG1216 Predicted glycosyltransferases 109 61 Op 2 . + CDS 109475 - 110443 263 ## Ppro_3338 glycosyl transferase family protein + Prom 110490 - 110549 4.1 110 62 Tu 1 . + CDS 110662 - 112725 3121 ## COG0751 Glycyl-tRNA synthetase, beta subunit + Term 112768 - 112830 10.9 + Prom 112756 - 112815 5.1 111 63 Op 1 . + CDS 112901 - 113911 1078 ## Psyc_1209 hypothetical protein 112 63 Op 2 . + CDS 113921 - 114961 1414 ## Psyc_1209 hypothetical protein + Prom 115116 - 115175 3.7 113 64 Op 1 . + CDS 115238 - 115984 257 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 + Prom 116128 - 116187 8.4 114 64 Op 2 . + CDS 116286 - 118268 755 ## PROTEIN SUPPORTED gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 + Term 118363 - 118429 30.0 + TRNA 118341 - 118416 95.7 # Val TAC 0 0 + TRNA 118452 - 118528 93.9 # Asp GTC 0 0 + TRNA 118573 - 118648 76.2 # Val TAC 0 0 - Term 118729 - 118780 7.2 115 65 Tu 1 . - CDS 118798 - 119436 816 ## Pnap_2987 OmpA/MotB domain-containing protein - Prom 119470 - 119529 6.7 + Prom 119433 - 119492 4.1 116 66 Tu 1 . + CDS 119574 - 120485 1704 ## COG0752 Glycyl-tRNA synthetase, alpha subunit + Term 120520 - 120568 14.9 - Term 120513 - 120551 10.2 117 67 Tu 1 . - CDS 120618 - 121343 700 ## COG1385 Uncharacterized protein conserved in bacteria - Prom 121375 - 121434 3.2 + Prom 121320 - 121379 3.5 118 68 Tu 1 . + CDS 121526 - 122215 949 ## COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family + Term 122410 - 122453 6.2 119 69 Tu 1 . - CDS 122463 - 122831 335 ## COG3012 Uncharacterized protein conserved in bacteria - Prom 122954 - 123013 3.7 + Prom 123023 - 123082 4.3 120 70 Tu 1 . + CDS 123105 - 123959 1107 ## COG2878 Predicted NADH:ubiquinone oxidoreductase, subunit RnfB + Term 123976 - 124028 13.2 + Prom 124242 - 124301 6.1 121 71 Tu 1 . + CDS 124335 - 125366 1650 ## COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase + Term 125375 - 125425 20.1 - Term 125355 - 125422 26.1 122 72 Tu 1 . - CDS 125431 - 126567 1610 ## COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain + Prom 126690 - 126749 5.6 123 73 Tu 1 . + CDS 126784 - 129420 3846 ## COG0495 Leucyl-tRNA synthetase + Term 129452 - 129492 5.1 + Prom 129704 - 129763 5.1 124 74 Tu 1 . + CDS 129885 - 130346 -58 ## gi|298369586|ref|ZP_06980903.1| hypothetical protein HMPREF9016_02027 125 75 Tu 1 . + CDS 130513 - 131149 580 ## gi|298369587|ref|ZP_06980904.1| extensin Predicted protein(s) >gi|289656347|gb|ADEA01000020.1| GENE 1 2 - 1826 3083 608 aa, chain - ## HITS:1 COG:NMA2084_1 KEGG:ns NR:ns ## COG: NMA2084_1 COG0506 # Protein_GI_number: 15794959 # Func_class: E Amino acid transport and metabolism # Function: Proline dehydrogenase # Organism: Neisseria meningitidis Z2491 # 1 438 74 510 510 811 90.0 0 MFDFALPTQTSLRQAVTDAYRRDETEAVQDMLQRAQMSDEERQAADTLARRLVTQVRASR TKASGVDALMHEFSLSSEEGVALMCLAEALLRIPDKATRNKLIADKLSDGNWKKHLNNSP SLFVNAAAWGLLITGKLTTQTSEQSLGAALNRLLGKGGEPLIRKGVDYAMRLLGKQFVTG QTIEEALQNGKEREKMGYRYSFDMLGEAAYTQADADRYYNDYVQAIHAIGKDAAGQGVYE GNGISVKLSAIHPRYSRAQHERVMGELLPRLKELYLLGKKYNIGINIDAEEANRLELSLD LMEALVSDPDLAGYNGIGFVVQAYQKRCPFVIDYLIDLARRNNQKLMIRLVKGAYWDSEI KWAQVDGLNGYPVYTRKVHTDISYLACARKLLSAQDAVFPQFATHNAYTLAAIYQMGKGK DFEHQCLHGMGETLYDQVVGPQNLGRRVRIYAPVGTHETLLAYLVRRLLENGANSSFVSQ IVDEKISIDQLIRSPFDTIAEQGIHLHAALPLPRDLYGKGRLNSQGFDLSNENVLQQLQQ ELNRAAAQQFQTASVVNGKSRPVGAGQQVRNPADHSDIVGSVSFADAALAQEAVAAAVAA QAAWNGTP >gi|289656347|gb|ADEA01000020.1| GENE 2 1964 - 3490 1916 508 aa, chain - ## HITS:1 COG:NMA2083 KEGG:ns NR:ns ## COG: NMA2083 COG0591 # Protein_GI_number: 15794958 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Na+/proline symporter # Organism: Neisseria meningitidis Z2491 # 1 508 1 508 508 813 89.0 0 MNPMYITFGLYLIAVLLIGLAAYFSTRDFGDYILGGRSLGPFVTAMSAGASDMSGWLLMG LPGAIYLSGLNEAWIAIGLVVGAYFNWLLVAGRLRVHTEYANNALTLPDYFFHRFGAGGH LMKVISAIIILFFFTIYCASGIVAGATLFQSLFHGMSYNQAMWLGAGATIAYTFLGGFLA VSWTDTLQASLMIFALILAPVMVYLSLGGADQMSAAIQHVAAGTGKEYGSLFAGTTVIGI VSTAAWGLGYFGQPHILARFMAAESAKSLVSARRIGMTWMVLCLAGAVAVGYFGIAYFGA NPEQVSSMNGNHERIFIALSTLLFNPWIAGIILSAILAAVMSTLSCQLLVCSSAITEDFY KGFLRKHAEQKELVWVGRVMVLAVAVIAILIAADPESKVLGLVSYAWAGFGAAFGPVVIF SVLWKRITAYGALSGMIAGALTVVAWAEWVKKPALAAHDTGLLTLYEIVPGFIACALVTV LVSLIDKVPSSAITERFEKADAEYKAAK >gi|289656347|gb|ADEA01000020.1| GENE 3 3910 - 4860 1464 316 aa, chain + ## HITS:1 COG:no KEGG:NMCC_0601 NR:ns ## KEGG: NMCC_0601 # Name: mafA2 # Def: adhesin MafA2 # Organism: N.meningitidis_053442 # Pathway: not_defined # 16 315 13 312 313 512 89.0 1e-144 MKITLTTLTLSALLLTGCGTLTGIPSHGGGKRFAVEQELVAASSRAAVKEMDLSALKGRK VALYVSTMGDQGSGSITGGRYSIDALIRGGYQNNPDSATQYSYPTYDTTATTKADALSSI TTSTSLLNAPAAALTRNSGRKGERSAGLSVNGTGDYRNETLITNPRDVSFLTNLVQTIFY LRGIEVVPPEYADTDVFVTVDVFGTIRSRTELHIYNAETLKAQTKLEYFAVDRNSRKLLI KPTSAAYESQYKEKYALWTGPYKVSKTVKASDGLMVDFSDITPYGDTTAKNRPDFKQNNG KNLDVSDEVIRRREGE >gi|289656347|gb|ADEA01000020.1| GENE 4 4864 - 6651 1604 595 aa, chain + ## HITS:1 COG:no KEGG:NGO1392 NR:ns ## KEGG: NGO1392 # Name: not_defined # Def: MafB3 # Organism: N.gonorrhoeae # Pathway: not_defined # 1 506 1 507 605 795 81.0 0 MKPLRRLTNLLAACTVAAAAFGQPALAAELAKDPFITDNAQRQHFEPGGKYHLFGNPRGS VANRTGKIDVTQAYTHQMGNLLIQQANINGTIGYHTRFSGHGHEVHAPFDNHASRSASEE KGSVNEGFTVYRLNWEGHEHHPADGYDGPQGGNYPKPTGARDEYTYNVNGVARSIKLNPT DTRDVRQRISDNYSNLGSNFSDRAYEANRKMFEHNSKLDRWGNNMEFINGVAAGALNPFL SASEALGIGDILYGTGYAIDKATMYGISPLSADGKLAAIGGLGGVAGFEKNTREAVDRWI QENPNAAETVEAAFNVAAAAKAAKLAKATKPGKAAVSGDFSKSYTCSFHGSTLVKTADGY KAIARIRVGDHVFAKDEASEKTGYKPVTAQYGNPYQETVYIEVSDGLGKIQTLVSNRIHP FYSDGKWIKAEDLKAGNRLSSESGAEQTVQSITVKPEPLQAYNLTVADWHTYFVKGDKAE TEGVWVHNECPYGKGNQRYKDASYHGKNDNSVKSRAPTNGQAALDNSVQVKSTSPRRVGV DKANNEIVVLDKTQTFNNGSAEYHGHVRSWQDLHTDQKNALKKAGLVNSKGKIKK >gi|289656347|gb|ADEA01000020.1| GENE 5 6648 - 6977 265 109 aa, chain + ## HITS:1 COG:no KEGG:NMB0656 NR:ns ## KEGG: NMB0656 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis # Pathway: not_defined # 1 109 1 109 109 190 99.0 2e-47 MTDKSKTEKLISSDDKQSVIDGILDMVFNSKAYEVPWISEKLMELSKNKDLDIAGLSLTC FGHLARLHSNIGDYDKVISLLHSKQDDPELQGRAEDALEDISLFLSENH >gi|289656347|gb|ADEA01000020.1| GENE 6 7126 - 7794 483 222 aa, chain + ## HITS:1 COG:no KEGG:NMO_1664 NR:ns ## KEGG: NMO_1664 # Name: mafB17 # Def: putative adhesin MafB # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 1 222 353 574 574 379 82.0 1e-104 MVKTADGYKAIARIRVGDRVFAEDEASGETGYKPVTAQYGNPYQETVYIEVSDGLGKIQI LVSNRIHPFYSGGKWIKEEDLKAGSRLFAENGAEQTVQSVTVKQEPLQAYNLTVADWHTY FVKGDKAETEGVWVHNACPPKRAPEYHAGTVSESTFLNSAEKWLGKNYKSYPNGRYVSQD GMRQVRYGHHETNSSTHHGHFESYDKPNGRVIENSVVTIIQD >gi|289656347|gb|ADEA01000020.1| GENE 7 7801 - 8070 279 89 aa, chain + ## HITS:1 COG:no KEGG:NMO_1665 NR:ns ## KEGG: NMO_1665 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 1 89 1 89 89 166 96.0 2e-40 MSVKELFKVILDKNKDFPIRTIHCTPMGILPKPVALSIVQYEDDQGFYLFYLDETGQEQT DTYHDTLDSAFKQAEFEFGIRKEEWIQSS >gi|289656347|gb|ADEA01000020.1| GENE 8 8574 - 8927 206 117 aa, chain + ## HITS:1 COG:no KEGG:NMO_0539 NR:ns ## KEGG: NMO_0539 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 1 117 1 117 117 222 93.0 4e-57 MEIKNEQIMICKKYNTEIYPVSDISKIGVAENVKQTSLYPINGLRHRSKDDTNGWYIWAG ENFSNDENFFLPLHTSHLQIWRPEIIPFLTLPPGYRFLIGENGYEDVWFDESLLNDN >gi|289656347|gb|ADEA01000020.1| GENE 9 9392 - 9895 260 167 aa, chain + ## HITS:1 COG:no KEGG:NGO1386 NR:ns ## KEGG: NGO1386 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae # Pathway: not_defined # 1 161 1 161 234 253 78.0 2e-66 MVKTADGYKAIARIRVGDQVFAKDEASGETGYKPVTARYGNPYQETVYIEVSDGLGKIQT LVSNRIHPFYSGGKWIKAEDLKAGSRLFAENGAEPTVQSVTVKQEPLQAYNLTVADWHTY FVTGDKAEMEGVWVHNDCPYGNLSDNKFVGEGKNLHQLKRKQSSKKT >gi|289656347|gb|ADEA01000020.1| GENE 10 10108 - 10380 180 90 aa, chain + ## HITS:1 COG:no KEGG:NMC1798 NR:ns ## KEGG: NMC1798 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 90 1 90 90 163 96.0 2e-39 MQWKFEDPQNTAVITTRRILSKINGILEVWHDADDGMWQFLDGNEIHEGDAVIVSLKEIV TIDSSVNLLSNLPLGGYAWRNTISEKWNFN >gi|289656347|gb|ADEA01000020.1| GENE 11 10550 - 11086 243 178 aa, chain + ## HITS:1 COG:no KEGG:NMC0605 NR:ns ## KEGG: NMC0605 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 178 30 207 207 327 92.0 1e-88 MSYNQKVLSHLQNFWINHEIKRFSWALGRIIEELPDFQVFQVIPNHEDEPWVYVSSGIGQ FLGQEFFIISPFETPEHIETLAMLASASMHYPDQFQLGKTINIGRPWVEQSSFQHFLISL PYPYGQELEYMDNVRFFWLLPITQPERLFLNTHSVEDLETRFDERGIDYLDINRPSVI >gi|289656347|gb|ADEA01000020.1| GENE 12 11251 - 11532 226 93 aa, chain + ## HITS:1 COG:no KEGG:NMCC_1774 NR:ns ## KEGG: NMCC_1774 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_053442 # Pathway: not_defined # 1 93 1 93 93 155 88.0 5e-37 MKNGHPNNRFLLEKRIFYLEHSGQYLMICALSDYFQNKHAVVMANFLYPNEKMDWRNLDD LFNELILEELQTSFMDWHPTIEEAINHHLEDFS >gi|289656347|gb|ADEA01000020.1| GENE 13 11665 - 12210 114 181 aa, chain + ## HITS:1 COG:no KEGG:NMC0604 NR:ns ## KEGG: NMC0604 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 181 1 181 181 354 93.0 6e-97 MIVVEHLERYLSEIKSGIKCLDRRYHLSVSVFPSQPYEGLTTFSTLGLNRYDLNYKSRFE LIFTCSEEWNKENIAAFLSGVAEYLIDNRKPILRGEIIQLPRVIIEGSKMDALYVSAPFY FDDDFQVCHGEHYNIVFPLLVPLYKQEAELVEKKGWNAFEQFLLDNKVGNLSNMNRKPFA W >gi|289656347|gb|ADEA01000020.1| GENE 14 12349 - 12705 94 118 aa, chain + ## HITS:1 COG:no KEGG:NGK_1627 NR:ns ## KEGG: NGK_1627 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 44 118 171 245 245 139 96.0 3e-32 MVKTADGYKAIARIRVGDRVFAKDEASGKTGYKPVTAQYGNPYQEAVIDLNRIQNNGQVK CANCGIETIPAKQSIKNTTPTSNERQVDHVIPKSKGGQGTPKNGQVLCRGCNIKKSNK >gi|289656347|gb|ADEA01000020.1| GENE 15 12702 - 13121 268 139 aa, chain + ## HITS:1 COG:no KEGG:NMCC_0605 NR:ns ## KEGG: NMCC_0605 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_053442 # Pathway: not_defined # 1 139 1 139 139 253 95.0 2e-66 MKSKLTVVYYDLESNIAEERLSGNIMPDGNFLIQEIPLFAPNLALNDIVAIEREDKMLFF DHLIKASGNTTINIVVLDHFPKDLLAVIEEHSGKIRKNGENYLSVNFPPKKYDFDLKEIL NRYEEANILSYREACLGYS >gi|289656347|gb|ADEA01000020.1| GENE 16 13339 - 13566 261 75 aa, chain + ## HITS:1 COG:no KEGG:NMC1792 NR:ns ## KEGG: NMC1792 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 73 3 75 77 117 87.0 2e-25 MEIKFNILGIILNGANPEEKFIKIIDDQKNTGGFLILLSSNDKFLPFNSYDDWIENLEIL KEYLQESNWIIKWSQ >gi|289656347|gb|ADEA01000020.1| GENE 17 13699 - 14241 230 180 aa, chain + ## HITS:1 COG:no KEGG:NMC1793 NR:ns ## KEGG: NMC1793 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 180 1 180 180 358 96.0 7e-98 MINHVEKYIGTISHGSKSDSGSQYKLNIAAIPSSPNRDLKTYITLGLSKHDLNYKSRFEI LFVCSLKYDENQIFPFLRWLAETIIENKKILLRGQVIYLPRSIVDSTKMDALYVSAPFYF DDDFQVCHGEHYNIVFPLLVPLYKQEAELVEKKGWNAFEQFLLDNETDNLSDMNRKPFVW >gi|289656347|gb|ADEA01000020.1| GENE 18 14400 - 15560 696 386 aa, chain + ## HITS:1 COG:no KEGG:NGK_1901 NR:ns ## KEGG: NGK_1901 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 5 384 6 368 377 276 41.0 8e-73 MRIIKNILLTSFLGLFVFWLGSGILFEINPKWFMSETAVEIPENPNRFVGSIAAFLRGEN KNPSLQAAAALMESSIGHTVDKTEFKRKGTLSIEDKPFTSIADFLAVSRKLDFLKGKSDW YTDEETDGNYRSNTNYYLFQNVLIEAKDSFTRIGDERDRLDVVFTYLNNRPLSAEIVRFR GGPGRAESKAVWSIRTIWQPDGSVFTQKTDGTVDISGYKECGRCYQDALAYADKAEFAAF KTQYVKQAREKSNRIAANRTSSVNYQNMPEIMPKGMSANSLVVGYDKQHRPEKIYWSYDN GKRRQSFEYYLENGRPFMAQSSSVPLTEDGETADFNAEPRIQTWFIHDGKILKEELSNTP PDHPLKITSLNSDIQRYADAAAKRQK >gi|289656347|gb|ADEA01000020.1| GENE 19 15644 - 17083 1277 479 aa, chain - ## HITS:1 COG:PM0544 KEGG:ns NR:ns ## COG: PM0544 COG0297 # Protein_GI_number: 15602409 # Func_class: G Carbohydrate transport and metabolism # Function: Glycogen synthase # Organism: Pasteurella multocida # 1 478 1 478 480 747 76.0 0 MKVLHVCSELYPLLKTGGLADVMGSLPFAQKEIGIDARILLPAYPAISAGVPQTDVVAEF DNFAGHIVLRYGEYEGIGIYLIDAPHLYAREGNPYHDAGYADYADNYKRFALLGKVGAEL AAGLDGFWRAEVVHSHDWHAGLAAAYLFNEGRPAKSVFTIHNLAYQGQFNSRHLTEIGLP ESMFRMHGLELFGQISYLKAGVYYSDAVTAVSPTYAGEITTPEFAYGLQGLLSAQYREGR LVGILNGVDEKIWHPDGDQYIRHAYSAEDMGGKEKNKAELQAYFNLPQQADALLFVMITR LTEQKGVDLLLESADEIVKQDGQLAILGSGAPHLEDGIRKLAEDNPQHIAVKIGYDEALS HLMIAGGDVILVPSRFEPCGLTQLYGLKYGTLPLVRATGGLVDTVVDACAENIQNGTATG FVFTQPTAADLRQALQAAFDLWKQQHIWTNVRATAMRQDFSWTLSATRYGQLYRKILSE >gi|289656347|gb|ADEA01000020.1| GENE 20 17222 - 18532 1180 436 aa, chain - ## HITS:1 COG:PM0543 KEGG:ns NR:ns ## COG: PM0543 COG0448 # Protein_GI_number: 15602408 # Func_class: G Carbohydrate transport and metabolism # Function: ADP-glucose pyrophosphorylase # Organism: Pasteurella multocida # 1 436 5 439 439 789 83.0 0 MNNNLSQVSSKYTLAKDTLVLILAGGRGSRLHELTDKRAKPALYFGGNRRIIDFALSNCI NSGLNHIGVITQYAAHSLLRHLQKGWSFLPQERGEFIDMLPARQQIDDSTWYRGTADAVY QNMAIIRDHYKPKYILILAGDHIYKQDYGQMLLDHVNSGARCTVGCIEVPRSEASEFGVM AVNENLKVKDFVEKPKDPPPMVGKPDVSLASMGIYVFDADYLYEMLNKEVNTPYTSHDFG KDVLPRCLEEGTLYAHPFSRSCMGRNTEGDIYWRDVGTLDSFWQSNIDLVSEHPQLDIYD QSWPIRGNPVQSYPSKFFYKNANIKPVDNSLIGGGCVITDASISYSVLFDRIRINEGSSI DHSVVLPEVVIGKNCILRHCIIDRHCVIPDGMRIGVDKESDRKRFRVSSSGKVVLVTPAM LKRLEGGNVPEEGHLD >gi|289656347|gb|ADEA01000020.1| GENE 21 18935 - 20347 1781 470 aa, chain - ## HITS:1 COG:NMB1797 KEGG:ns NR:ns ## COG: NMB1797 COG2027 # Protein_GI_number: 15677636 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) # Organism: Neisseria meningitidis MC58 # 22 469 23 469 469 502 54.0 1e-142 MKLRTTAALLLCALSLNARALDFGGIPPEEISVYVKDLQSGRIIEEHRADESMNPASTMK LVTAFAAFRALGRDYRWTTELKSDGRVNGDTLEGDIYWVGSGDPMLDQDGLVALQQQLRD KGIVHINGRLVLDRSVWGETGSADDFGSDAGEAFMTAPDPNMLAYKVVWVKPERGTAGGV DITTNPPLPEIALKNQVSITGSAAGCNALQNYMRARYTGGVLHASGKIPESCLGQEMFVN MLSMQVYAEKSFVNQWRKAGGTISDGLKTAAAPAGAAVLAGSQSKPLAEVLTEMNKHSNN LIARTVFLKLGEHSSDGLTVQAAKNTVRNELAAAGVDNVGQLVLENGSGLSRKERATARM LGQVLEKAYFSPFKQDFVNTLPIAGTDGTLKKRFRQAGLPLRLKTGTLKDVRALAGYWLG ENPKIVVVLINSSRSNGYLKDMDKMVSRIVLPGGDDWVEAGLLCEKRQAV >gi|289656347|gb|ADEA01000020.1| GENE 22 20447 - 21505 1353 352 aa, chain - ## HITS:1 COG:BS_lmrB KEGG:ns NR:ns ## COG: BS_lmrB COG0477 # Protein_GI_number: 16077336 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Bacillus subtilis # 1 350 113 476 479 183 35.0 4e-46 MVQAVSAAFFVPLLFNGILSIYPPNKRGTAMGVITMMFTAAPAIGPTLSGIIIDHTHWRV LFGFTAPFMLAAMVLVGKYLTVNLSNISRPKIDILSAVLSIAGFGGLVYASSNFARLPLA EFILLFAASVALVGWFAYRQSRLATPLLNLRAFEYKQFRHCVVILAGAVFLFLGLELMMP MYTQQVLMLTGTATGLILMPASIAQAVAAPLFGKLLDKKGGRFVLLPATVMLTVSLAVLW LFLRIDTQVMMLTAMFTLMAVSVSACVTGETHGLNALPKKLNPHGAAILTTIDPIAGAIG AAFFVGATNIGEKLSSAASPQQAMLDGIHLAMGSALVLGAVMVFFATRLKTP >gi|289656347|gb|ADEA01000020.1| GENE 23 21459 - 21875 369 138 aa, chain - ## HITS:1 COG:lin1658 KEGG:ns NR:ns ## COG: lin1658 COG0477 # Protein_GI_number: 16800726 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Listeria innocua # 27 108 13 97 489 80 49.0 9e-16 MHASDIDTDDTAHEYHADNPDFPAKTVVATLFIGAFFGYLNDTLLNVALTPIMKDFGVDK TTVQWLTTGFLLVMGAFTPITAGVIQWFETRKMVLFTQATFLAGGGFADLRVCADLRDFG RGADGAGGVCRIFRAAPV >gi|289656347|gb|ADEA01000020.1| GENE 24 22036 - 22758 1075 240 aa, chain - ## HITS:1 COG:PM1838 KEGG:ns NR:ns ## COG: PM1838 COG3201 # Protein_GI_number: 15603703 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinamide mononucleotide transporter # Organism: Pasteurella multocida # 1 235 3 229 234 190 46.0 2e-48 MEWLKRELFGGWTKFEAFWLLLFLGIQIAVFAVKPDSLAASIAAITGILCVVFVGKGKIS NYFFGLISVSLYAYISYTFKLYGEMMLNLFVYVPVQFIGFAMWRRHMTDQNTVSLGNAEE VKAKALTMRQWLWVVALTVAGTLAYIEFLHYIGSALPALDGVTVVISLVAQILMLLRYRE QWVLWILVNILTISLWAVMWLKQGETSLPLLLMYCMYLCNSTYGYINWTRLVRHHAGQAA >gi|289656347|gb|ADEA01000020.1| GENE 25 22939 - 23505 1140 188 aa, chain + ## HITS:1 COG:NMA0666 KEGG:ns NR:ns ## COG: NMA0666 COG0431 # Protein_GI_number: 15793651 # Func_class: R General function prediction only # Function: Predicted flavoprotein # Organism: Neisseria meningitidis Z2491 # 1 188 1 188 188 320 82.0 1e-87 MAKKVSILVGSLRKGSFARKVAQNVIPMFPAGYEVQIVEIGHLPLYNFDYDDPNETDFPT PESYTLFRETIKASDGILFVTPENNRTVPACLKNAVDIGSKPNADVAWKKTPAGIISHSV GKMGGYSSQKNLRLALSYFDMPLTGQPEVFLGNSPTLFDDSGKLIESARGFVQGYIDQLV ALIEKNPK >gi|289656347|gb|ADEA01000020.1| GENE 26 23669 - 24409 912 246 aa, chain + ## HITS:1 COG:no KEGG:NGO1349 NR:ns ## KEGG: NGO1349 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae # Pathway: not_defined # 26 246 6 230 249 233 58.0 3e-60 MQTACSFSFNIAAWNAVSSRVASAEQWQQWAAGRLDAEGLPEYKPALSFLPAMQRRRLGA SARLVCEAAWELANAYPNCLPVYVSHDGEINRSFELWPELLRSGTVSPTSFGLSVHNAQA GQWSILRGDMQESTALATLSDGIETALAEAYAVLCDGAERILLVMADDPLKIDYAVAAER APFPYALAMVLEKGNAYRLTLEPADRPSENTEPYWGALDWIRFMLSDGLKQSRNYTDRIW HWQKTA >gi|289656347|gb|ADEA01000020.1| GENE 27 24406 - 25164 1049 252 aa, chain + ## HITS:1 COG:NMB1698 KEGG:ns NR:ns ## COG: NMB1698 COG0204 # Protein_GI_number: 15677546 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Neisseria meningitidis MC58 # 1 251 1 251 252 410 74.0 1e-114 MKTLDYCRRFFATLFGFILFGVAGVLFKIALLPYTLKSTKGDIPRQLAARRMIGRVWRFF VGYLQWSGVLSVRFNGLEKLGRPGQLVLANHPSLLDVVLMVSHFPDPNVLVKKDLLNNPS MKSQIIASGYIPNDESMEMLEEIDAVFKSGQSMLIFPEGTRTGWDGQVKMHRGAVSLGLR SASVITPVCIKMTPPNFKKGQPWYKIPPHKIHYEITVGDDILPEEWLAEKPLPIAARRLN EYLQDYFTRKTT >gi|289656347|gb|ADEA01000020.1| GENE 28 25161 - 25421 585 86 aa, chain + ## HITS:1 COG:NMB1697 KEGG:ns NR:ns ## COG: NMB1697 COG0236 # Protein_GI_number: 15677545 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl carrier protein # Organism: Neisseria meningitidis MC58 # 1 86 1 86 86 125 87.0 1e-29 MNNLENQIKELIIDSLGLEDITAADIGSEDPLFGDEGLGLDSVDALELGLAVQKTFGFQL DGENDNLRENFANVKTLAEFVKSRQA >gi|289656347|gb|ADEA01000020.1| GENE 29 25435 - 25686 677 83 aa, chain + ## HITS:1 COG:NMB1696 KEGG:ns NR:ns ## COG: NMB1696 COG0236 # Protein_GI_number: 15677544 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl carrier protein # Organism: Neisseria meningitidis MC58 # 1 80 1 80 81 104 85.0 5e-23 MTEQEVRTLLTDALVNLFEIEPERIKPETNLYEDLEIDSIDAIDLIDHIKRETGRKLQAE DFRNVRTVDDVVQAVLKVQAQDS >gi|289656347|gb|ADEA01000020.1| GENE 30 25759 - 26298 781 179 aa, chain + ## HITS:1 COG:NMA1954 KEGG:ns NR:ns ## COG: NMA1954 COG4648 # Protein_GI_number: 15794837 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis Z2491 # 36 179 1 144 144 180 68.0 1e-45 MKILGKLLLTLASLAYPLLWYYGRENGAFFWLAAAMCALWLIRAAMPQTAAQRITAIILA AFFAAVLIFRRPDSMYWYPVAVNGLMLAVFGGSLFAKQTVIERLARLQHPDLPPEGVRHT RRVTQIWCGFFILNGATAAILAGLQYYDWWAAYTGIVSYVLMGLLFAGEWVYRKTVLKV >gi|289656347|gb|ADEA01000020.1| GENE 31 26598 - 26903 212 101 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298369501|ref|ZP_06980818.1| ## NR: gi|298369501|ref|ZP_06980818.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 3 101 1 99 99 205 100.0 7e-52 MKMISYWKGIDGQPDPLEIYEDKEGLVFIIGTYDHKNQNKAEKALGIHWGDFPKSRGILA PCVIPAETRSAILAGLLHQAINKQDMKAINRISDAINFFIN >gi|289656347|gb|ADEA01000020.1| GENE 32 26916 - 28670 1990 584 aa, chain + ## HITS:1 COG:RSp0367_1 KEGG:ns NR:ns ## COG: RSp0367_1 COG0365 # Protein_GI_number: 17548588 # Func_class: I Lipid transport and metabolism # Function: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases # Organism: Ralstonia solanacearum # 48 458 51 438 438 164 34.0 6e-40 MHLTQILSPSLPQQDLIATHPNWTRADFNRAVFRLSGRLKTANVQTAALWFDDAALFACA VLAVWHSGGRVLLLPNLARDNLDWGRTADVFLTDSEDLQSKLDSQTEQRDESGQPLDVQS NPPVWHLPDLLAHTSPENPTPAPENHLIPDHAEAWLKTSGSSGEAQVIVKTAAQMQAEAL MLADALPFGRGGETVIGSVIPQHLYGFTFRFALALTMGWPMERRQAVYPENLLASTAAHE KVVWIASPAVLNRLGENRNWQSIGHKIAGIVSAGGALPEATADLLQQAAVRPFEVYGSTE TGVIASRRESREWRPFAGVEIGQNAEGALWASSPWSPERRQTADLIEPQPDGFLLLGRQD RIIKFEDKRVSLTQIEHELLRHPWITDAHCGRHPQHQRIAIWAALNADGIAALRDQGRAA VADALKRHLAATQDTIALPRYWRFADSLPRNAQAKIAAADFQTAFTVAQTSPVWSKTSSE EETAAETFIGRVPLDLVYFGGHFATFPLVPGVVELQWVRDLAARHPWGRQRVVRVENLKY QQFVRPHDEVSVELKYDEAKNKLSFKVSNGDNPCASGRIVFEVV >gi|289656347|gb|ADEA01000020.1| GENE 33 28825 - 29913 1437 362 aa, chain + ## HITS:1 COG:Z4850 KEGG:ns NR:ns ## COG: Z4850 COG0500 # Protein_GI_number: 15803988 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli O157:H7 EDL933 # 11 360 2 351 352 332 47.0 6e-91 MHLFPALAQRYSEEHQSAGEAQRLAQEIAFAPIVFQVSRLMVKFGILDLLNDHSDGLTQA EIAEKAQISGYAAQVLLEASLSIGTVHTRDNRYFISKAGWFLLKDKMARVNMDFTQEICY QGMFDLEKTLQTGKPEGLKVFGSWPTIYEGLSSLPSVAQEKWFAFDHYYSDNSFAEALKT VFAKPVKKLLDVGGNTGRWAEQCVGYNAEVEVTIMDLPQQIALMREATKGKTGAERIHAH PANLLDPEVPFPTGFDAIWMSQFLDCFSEEQVTGILRRAAASMSAHTSLYIMEPCWDRQQ YETAAYCLTMTSLYFTAMANGNSKIFHSEDLIRCVENAGLKVAEISDGIGRGHSILRCEK VV >gi|289656347|gb|ADEA01000020.1| GENE 34 29928 - 30662 822 244 aa, chain + ## HITS:1 COG:Z4858_1 KEGG:ns NR:ns ## COG: Z4858_1 COG0463 # Protein_GI_number: 15803996 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Escherichia coli O157:H7 EDL933 # 5 231 9 237 246 239 50.0 3e-63 MKTLVLIPHYNHPAAIARVAQTMHGFGLDVLIVDDGSREECKPVLQALVSDGIRVLYRPI NGGKGAAVKTGLKYAEEHGYSHVLQVDADGQHHLDDTPKLLAAAEQNPEAVVCGWPQYGG DAPKARLYGRKITDFWNMLHTWSCDIKDGMCGFRLYPLAPALSVVREETVGDRMDFDTEI LIRLYWRGVKPVWIKTPVQYAADGVSHFNAFADNVRISKMHTRLFLGMLRRRLGALFGKG RLKQ >gi|289656347|gb|ADEA01000020.1| GENE 35 30659 - 31588 1151 309 aa, chain + ## HITS:1 COG:Z4858_2 KEGG:ns NR:ns ## COG: Z4858_2 COG4261 # Protein_GI_number: 15803996 # Func_class: R General function prediction only # Function: Predicted acyltransferase # Organism: Escherichia coli O157:H7 EDL933 # 8 304 3 303 312 170 33.0 2e-42 MTDNTQNHWAAQPERGSRLFLALTTLMVRYLPAFLMRPCIWFVVLYFYATAPKPRRHILR YQTRLQTAFPDTVLPKHSVFKQFIAFGEAICDRFAVWQRKIRYEDLVLEDPDGVYAQISD SVRGQIFACSHLGNTEVCRALVSHHKGFRLNVLVHSKHAQAFNEALQKAGAEHIRLIQVT DLDPTLMMELNRRIEDGEWIAIAADRVPVRGEKTADINFLGHTAPMPQGAWLLAALLKTQ VNTLFCVKQNGRYHLKLRRFTDTSNWKRGNREAAVTAAMQGFADILAQECAQNPLQWFNF YDFWSEKAV >gi|289656347|gb|ADEA01000020.1| GENE 36 31641 - 32078 527 145 aa, chain + ## HITS:1 COG:RSp0364 KEGG:ns NR:ns ## COG: RSp0364 COG0824 # Protein_GI_number: 17548585 # Func_class: R General function prediction only # Function: Predicted thioesterase # Organism: Ralstonia solanacearum # 10 138 12 140 144 125 47.0 3e-29 MKKHIYCRHSFEIEVQFFDVDAMHIVWHGNYVKYLETARCAFLSAIGYDYNEMARQGYSW PIVQMNLKYIRPARFGQKIRVDMEIVEIESCLRIDYTIYDVETNEKLTRASTTQAAVSLS DGLMQFQTPDSWLEAVKRHPTFQAV >gi|289656347|gb|ADEA01000020.1| GENE 37 32125 - 32715 863 196 aa, chain + ## HITS:1 COG:no KEGG:D11S_0531 NR:ns ## KEGG: D11S_0531 # Name: not_defined # Def: outer membrane lipoprotein carrier protein LolA # Organism: A.actinomycetemcomitans # Pathway: not_defined # 12 196 11 193 194 189 57.0 4e-47 MKKTIAAALLTLASPALWAFSTAELAQTLQKPSNVQGAFTQQRQLKSLSKPMVTGGKFVL IPKKGLLWQMQKPFETTLRVRADGIMQWNGNAWTNPNQGKVGQSQQIKLFLDLLGGNTQG LEKQFNLALSGTEKQWTLNLTPKTAVTRQIFNRIAISGDNVVRKIELDEKQGDKTVMQFR EVQTGKPLDDFSQKAL >gi|289656347|gb|ADEA01000020.1| GENE 38 33247 - 34167 1289 306 aa, chain + ## HITS:1 COG:no KEGG:NT05HA_1736 NR:ns ## KEGG: NT05HA_1736 # Name: not_defined # Def: dialkylrecorsinol condensing enzyme # Organism: A.aphrophilus # Pathway: not_defined # 6 305 6 304 305 332 55.0 1e-89 MGNDVKKVLLVYYSQTGQLAELVRNFAEPLRQGGVHVDCVNLEPQEPYPFPWSFWRFFNT FPETVHLKPAPILPPAIPADDYDTVVIAYTVWFLSPAQPITAFLQREETCRLLNGKPVVT LIGCRNMWLGAQEKMKSLLAQNGAKLIGNIVKIDACNSAASFITTPAWLLSGDKQYFRAL PSAGIADGELADAARFGAKMRDTLLQNKTLDETLFQNMGAAKVNEKLIFSEKAAGRSFFL WGRLLMAAGRVSPLLRRALLCFYILFLLAMILVLVPVSVLVKKLLHPLLKGRLKKLADYY GQPSGG >gi|289656347|gb|ADEA01000020.1| GENE 39 34205 - 34624 697 139 aa, chain + ## HITS:1 COG:no KEGG:CCV52592_1561 NR:ns ## KEGG: CCV52592_1561 # Name: not_defined # Def: hypothetical protein # Organism: C.curvus # Pathway: not_defined # 7 131 10 135 140 163 61.0 2e-39 MDDFERIYRDWHEYAKNRDTDALIALYADDAVFESPLVPAIMDTDSGILCGKAEILRFLQ EGTRRRPNDLVRWYRDGRYFVAGDTLVWEYPRQTPDGDQVDILEVMRLESGKIKHHRIYW GWFGTQMLTASALAKAVKA >gi|289656347|gb|ADEA01000020.1| GENE 40 34740 - 34985 381 81 aa, chain + ## HITS:1 COG:no KEGG:BF3096 NR:ns ## KEGG: BF3096 # Name: not_defined # Def: hypothetical protein # Organism: B.fragilis # Pathway: not_defined # 3 80 5 81 87 66 42.0 4e-10 MPEVIHYPERRRFQIDINGLEAGYISYTEHNGSWDVDHTEVSPNFRNQGIARMLVDALTA YAEAHGIPLTASCDYAARFIG >gi|289656347|gb|ADEA01000020.1| GENE 41 35065 - 36222 1508 385 aa, chain + ## HITS:1 COG:CC0865 KEGG:ns NR:ns ## COG: CC0865 COG0332 # Protein_GI_number: 16125118 # Func_class: I Lipid transport and metabolism # Function: 3-oxoacyl-[acyl-carrier-protein] synthase III # Organism: Caulobacter vibrioides # 11 385 28 398 399 265 42.0 1e-70 MIPNNTLKNVYLNRTAAFLPNAPVGNDAIEAVLGMAGELPSRVRRMILRSNGIQTRHYAI DPDSRRATHTNAELAAEAVRRLFVQGIKPEDITSLSCATSYPDQTMPGHGVMVHGLLDMP SCEVLSMAGVCAAGMAAMKHAYNAVRTGEHAHTVAAASENASAVMRGEVFQHETDHKKLE NASPEIGFEKDFLRWMLSDGAGAAYLSDRPNSDGLSLKIRWIELLSYANEMPPCMYAGAE FRDGVFEGWKHADPEYSRRHSLMAVKQDVKLLNENIVRYTVEKPLAQIAAKHGIRADEID WFLPHYSSGFFRDRLSDGLKNIGFEIPQEKWFTNLYTKGNTGSASIYIILEEFMRTFPLE RGQKVLCYVPESGRFSTCFMLLEAV >gi|289656347|gb|ADEA01000020.1| GENE 42 36250 - 36648 721 132 aa, chain + ## HITS:1 COG:no KEGG:NT05HA_1738 NR:ns ## KEGG: NT05HA_1738 # Name: not_defined # Def: hypothetical protein # Organism: A.aphrophilus # Pathway: not_defined # 1 127 1 127 129 147 50.0 1e-34 MEIKDIPQDDSESYHGHLKVIYGTRDGRYEAGTSSGWQDEAYATEMAVAELDEQTRTARE AVARGEYSPLYYHMFRFRHDEAGLAMAAGVWKWQLRRHLRPEIFAKLPDKTLQKYADALQ INIDELKRTDAD >gi|289656347|gb|ADEA01000020.1| GENE 43 36776 - 37768 1069 330 aa, chain + ## HITS:1 COG:no KEGG:NT05HA_1739 NR:ns ## KEGG: NT05HA_1739 # Name: not_defined # Def: hypothetical protein # Organism: A.aphrophilus # Pathway: not_defined # 1 328 1 326 329 466 66.0 1e-130 MTEFPHQHTAHCESGVMSTLLKYHGHDLDEAMIFGIANALTFVWLPVVKLGGMPLVSYRI APRGIIKNTCKALGLKLSARKFSNAQKGQDALDAVLSSGKLAGLQTSVFWLPYFPPQMRF HFNAHNLLVYGKDGSDYLISDPVFETVQRCAAEDLQRARFAKGVLAAKGMMYTLENDRPS EKVKADLPAIIRKAIRKNAKQMLPPVFFVGVKGIRTLAKNIEALPAKRNAKYQKLFLGHL VRMQEEIGTGGAGFRYIYAYFLEQAARICDNPAFQTASEQMTAIGDQWRQFAAMCVKQCK KPSENGCREIAAFLRKIADDEEALWRGLLK >gi|289656347|gb|ADEA01000020.1| GENE 44 37877 - 38791 356 304 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225084369|ref|YP_002657150.1| ribosomal protein S16 [gamma proteobacterium NOR51-B] # 2 293 9 307 309 141 31 1e-32 MIQIQSLSHRYPKAETAALDNVSFDIADGECLGLLGHNGAGKTTLMSLLAGLQEVRQGEI LFDGKPLRLLSRSERQKIGLVPQDFAFYPQLSVWDNLLFFASLYKVRDKGRLNALLEQTD LTAHKNKAAKHLSGGLKRRLNFAIGLINTPQLVFLDEITVGIDPQSRRFILDSVADLTRQ GVTVVYTSHYLSEIEQLCGKIALLQHGKLVYHGGLDELLSTQTGVVRFTVEPPLPPQTLA ALGAKQVDSRGMMETAHDAAAVYAALQQSGAQIRYFQQGHGSLETFYLDFLRKDEPATDK QNPQ >gi|289656347|gb|ADEA01000020.1| GENE 45 38788 - 40041 1934 417 aa, chain + ## HITS:1 COG:BS_yfiM KEGG:ns NR:ns ## COG: BS_yfiM COG0842 # Protein_GI_number: 16077899 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Bacillus subtilis # 8 409 10 392 396 67 22.0 4e-11 MTTSSLLKELKLLCRDLHGLAVLFVMPIVFMLIMSLALSRDQDPHTDSRIALVGAADDSV NTALAAALEKEQIYVTLMSSEKLTDAQNGLHDKRFQLVLHNPNPASGKIADNKALQIYVP PDTEPSWLAAVKGVLQQHYTQTRLDAYFDNNDGIKIDNKKLPRSIRKDIQKKVDEKNDEQ FVAVQTFLDKKMLEEHYLSAGSGTVEKPNAVQHSVPAWLIFGMFFIMIPLSNVMALERQT NTITRLRLARASASGLIAAKLVPYFLINQLQFAGMLLLGRYLLPEIGVPALILNGSLVPY ALLSTAVSAAALGYALLVSVCAKSTEHAVVLGGGGIILMAAIGGIMVPAHVMPETMQQLT WISPMAWGLKAFQELLLNRSGLDGIGRYLILLSAFAATTLTAAVLAYRRQLQTQVRF >gi|289656347|gb|ADEA01000020.1| GENE 46 40432 - 40953 374 173 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298369514|ref|ZP_06980831.1| ## NR: gi|298369514|ref|ZP_06980831.1| hypothetical protein HMPREF9016_01952 [Neisseria sp. oral taxon 014 str. F0314] # 1 173 1 173 173 289 100.0 4e-77 MDNNEIERAHNLLLETAEVMAQFKQNSSHIVRSLQEKLDKSLCDQREMITDMVRNEVMRE MSVSVAGYVRDMENARNQMVNQVREFNSYLNKVNDENKKISSRLVLIVSISMATLIIGGL VLLFFYSMLIEQKRQDADMVGRINRANIVRCGDELCAKTGKSVENGYRVIQRR >gi|289656347|gb|ADEA01000020.1| GENE 47 41037 - 42134 628 365 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298369515|ref|ZP_06980832.1| ## NR: gi|298369515|ref|ZP_06980832.1| hypothetical protein HMPREF9016_01953 [Neisseria sp. oral taxon 014 str. F0314] # 1 365 1 365 365 652 100.0 0 MGQKTKYEMEQEKKYGPRFTGGDHLNPKDGFKYYLHKTMMANELHDGYGGYLMSNAVKGA SGPSFGGIQFDVGSNNDGQKLLEKVLRNAVDSKGNPFLSDTEMKQLHRIYKPFYDVEKNG KITKKGMTDADRQFYNQIKPKLDAALSSPKGMELLNENYKMQLDKKVSKVEEVISNVKNE ENRNFLEHSMQAKVFIADIGNQYGDKVNNALKNFLEQTENDRGIKVDHGRLTKVRGGFDM DDLKSFRMNTPYGIKHSEDAKRRDENIERITAPTRQQDNQKSVEFNTSSNNNPADRLHAL IQGFKNDTDGSFAAKALAENADVVANFKAEQQEVLKERSQQQQHEVAQNTPQIQEECSYG GRSFG >gi|289656347|gb|ADEA01000020.1| GENE 48 42171 - 42572 299 133 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298369516|ref|ZP_06980833.1| ## NR: gi|298369516|ref|ZP_06980833.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 133 1 133 133 251 100.0 8e-66 MKKVLFFSVILMGTAFCYAQENTTHKKDVCPKSMLENIEEIDYDCLDILDGRLEKEIDEK YKILYQRVKKKDIALHALPASYFTKVRKTWNAYKDQLCSDPTNDTDLKSAADWYILKCRI EQSQAHLKALKRF >gi|289656347|gb|ADEA01000020.1| GENE 49 42942 - 43166 190 74 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298369517|ref|ZP_06980834.1| ## NR: gi|298369517|ref|ZP_06980834.1| hypothetical protein HMPREF9016_01955 [Neisseria sp. oral taxon 014 str. F0314] # 1 74 1 74 74 132 100.0 1e-29 MQHFIMPLSAYLALSANVLLQLSHEETALFAKGLQVKTPVVGELFLRACEVLRAAKGKIV RIKPEFFQIPFDVI >gi|289656347|gb|ADEA01000020.1| GENE 50 43262 - 43552 483 96 aa, chain + ## HITS:1 COG:no KEGG:NT05HA_1742 NR:ns ## KEGG: NT05HA_1742 # Name: not_defined # Def: acyl-carrier protein # Organism: A.aphrophilus # Pathway: not_defined # 1 94 1 93 96 103 62.0 2e-21 MSYTFTLAEHALEAELKKLILQEADKTDDVAAEDFTDDAPLFGDGSPVDLDSLDALQICV ALQQYFQVRLQGDRMVRKHMMCVRDLAAFVRAEHGA >gi|289656347|gb|ADEA01000020.1| GENE 51 43549 - 44583 1018 344 aa, chain + ## HITS:1 COG:jhp0505 KEGG:ns NR:ns ## COG: jhp0505 COG0304 # Protein_GI_number: 15611572 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: 3-oxoacyl-(acyl-carrier-protein) synthase # Organism: Helicobacter pylori J99 # 124 341 161 410 412 84 29.0 2e-16 MSWVCGTAATSALDPQADFRRPDAVSYTFLNQPQQAAYFRAFTDDSLGSTAFADIAEQHL RRAAEDAGWPSESWHDAPVFIGSSSYAIAEYENRRRAGNTDIGEHGLLYLAEDLRKRSGN RQIFSLATACTSSAHALIQADNCLRGGAERAFVLGIENLNRLTLLHFHSLGLFTERYRPF GGNGLILGEGVAALALSATPPDCTGRLKLVGHAANTGNDLIQSNSKALEQVIRRALNAAA VLPENIAAVKTHGIGTADSDAAELAALENVFGTLPPLMAFKAQIGHTLGATAALETALLL SALKQGGGTDYQGREIRFSDDVFCLANHFGFGGSNTAMVWQWQS >gi|289656347|gb|ADEA01000020.1| GENE 52 44565 - 45332 707 255 aa, chain + ## HITS:1 COG:no KEGG:NT05HA_1744 NR:ns ## KEGG: NT05HA_1744 # Name: not_defined # Def: hypothetical protein # Organism: A.aphrophilus # Pathway: not_defined # 24 178 12 165 202 93 36.0 9e-18 MAMAIINPDIRIIAAARFDTEAAVGNKILKQTLQQQSGTDARRLSRLSLIAALGAGLLRG QGEIRPDCAVFLGTPFSSPSVFEKMADNVLNHHAAMPFDFIANLHNAPVFHAAQTLGTHG ATLAVATERHLETRFHPLLLAAQSLQSGGQAAVGWAYEHQATHADTREGSIWILLEHGAK YGVPVTLDTEAEEAEMPSLQEAAQSETQRYYWQDVADWVEELGRRDNSAAAGTWTLDTRK AEHEKDRITVKKSAI >gi|289656347|gb|ADEA01000020.1| GENE 53 45503 - 46831 527 442 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|16079597|ref|NP_390421.1| hypothetical protein BSU25430 [Bacillus subtilis subsp. subtilis str. 168] # 1 430 1 426 451 207 33 2e-52 MKKVFIRTFGCQMNEYDSEKMLAVLAEENGGIEQVTEADEADIILFNTCSVREKAQEKVF SDLGRVRPLKEKNPDLIIGVAGCVASQEGENIIKRAPYVDVVFGPQTLHRLPKMIVDKET SGLSQVDISFPEIEKFDHLPPARVEGGAAFVSIMEGCSKYCSFCVVPYTRGEEFSRPLND VLTEIANLAQQGVKEINLLGQNVNAYRGEMEDGEICDFATLLRIVHEIPGIERMRFTTSH PREFTDSIIECYRDLPKLVSHLHLPIQSGSDRVLSAMKRGYTALEYKSIIRKLRAIRPDL CLSSDFIVGFPGETEREFEQTLKLVKDIAFDLSFVFIYSPRPGTPAANLPDDTPHAEKVR RLEALNEVIEAETARINQTMIGTVQRCLVEGISKKDPDQLQARTANNRVVNFTGTPDMIN QMIDLEITEAYTFSLRGKPVEA >gi|289656347|gb|ADEA01000020.1| GENE 54 46979 - 47362 582 127 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298369522|ref|ZP_06980839.1| ## NR: gi|298369522|ref|ZP_06980839.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 114 1 114 127 212 100.0 6e-54 MLRGFIAVSILFLSSLTWARTLPDDMDVAVLKRIDLPYVELSSGGFSWMKVLTLGWIDGN AATFQLARGVRLRDENDRFLVLGRLTVQSGKPVAVKRDAAGVIRELWLLNDDEVAAFKEK AAAAQAK >gi|289656347|gb|ADEA01000020.1| GENE 55 47590 - 48882 2056 430 aa, chain + ## HITS:1 COG:NMA0592 KEGG:ns NR:ns ## COG: NMA0592 COG0001 # Protein_GI_number: 15793583 # Func_class: H Coenzyme transport and metabolism # Function: Glutamate-1-semialdehyde aminotransferase # Organism: Neisseria meningitidis Z2491 # 5 430 2 427 427 728 88.0 0 MIMTDRNETLFNRAKAIIPGGVNSPVRAFGSVGGVPRFIKKAQGAYVWDENGTRYTDYVG SWGPAIVGHAHPEVIEAVREAALGGLSFGAPTEAEIVIAEKIAELVPSVEQLRLVSSGTE ATMSAIRLARGFTGRDKIIKFEGCYHGHSDSLLVKAGSGLLTFGNPSSAGVPADFTKHTL VLEYNNTAQLEETFEKIGGEIACVIVEPFAGNMNLVRPSENFVRALRSLSAKHGAVLIYD EVMTGFRVALGGAQSLHGITPDLTTMGKVIGGGMPLAAFGGRKDIMACISPLGGVYQAGT LSGNPVAVAAGLKTLEIIRREGFYENLTARTEQLVKGFQTAAAKAGVAFTADSVGGMFGL YFADHVPQNYGDMARSNTDGFKHFFHGMLERGVAFGPSAYEAGFVSAAHTPELIDETVAA AEAVFAGMAG >gi|289656347|gb|ADEA01000020.1| GENE 56 48955 - 51168 3309 737 aa, chain - ## HITS:1 COG:NMB1735 KEGG:ns NR:ns ## COG: NMB1735 COG0317 # Protein_GI_number: 15677581 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Guanosine polyphosphate pyrophosphohydrolases/synthetases # Organism: Neisseria meningitidis MC58 # 1 737 1 737 737 1375 91.0 0 MNGILHTPSSIAPDLENYRGWFDGYLAGLPDKDVRLLQTALKLAQRHYPAEAKTDSGEPL LSNLMGAAQMVNDMDLLPDAVAATLLAAISGYCPDWQQVVTEQCNATICELVKGVDEVQK LTHFARVDSLATSEERAQQAETMRKMLLAMVTDIRVVLIKLAMRTRTMQFLSNIPDSPEK RAVAKETLDIFAPLANRLGVWQLKWQLEDLGFRHQEPEKYREIALLLDEKRTERLEYIEN FLNILRDELKKYNVHFEVAGRPKHIYSIYKKMVKKKLSFDGLFDIRAVRILVDTVPECYT TLGIVHSLWQPIPGEFDDYIANPKGNGYKSLHTVIVGPEDKGVEVQIRTFDMHQFNEFGV AAHWRYKEGGKGDSAYEQKIAWLRQLLDWRENMAESGKEDLAAAFKTELFNDTIYVLTPH GKVLSLPTGATPIDFAYALHSSIGDRCRGAKVEGQIVPLSTPLENGQRVEIITAKEGHPS VNWLYEGWVKSSKAIGKIRAYIRQQNADTVREEGRVQLDKQLAKLTPKPNLQELAENLGY KKLDDLYTAVGQGEISNRAIQKACGTLNEPPPVPVSETTIVKQSKIKKGGKTGVLIDGED GLMTTLAKCCKPAPPDDIVGFVTRERGISVHRKTCPSFQHLAEHAPEKVLDASWAALQEG QVFAVDVEIRAQDRAGLLRDVSDALARHKLNVTAVQTQSRDLEASMRFTLEVKQVNDLPR VLASLGDVKGVLSVTRL >gi|289656347|gb|ADEA01000020.1| GENE 57 51400 - 52050 1043 216 aa, chain + ## HITS:1 COG:NMA1990 KEGG:ns NR:ns ## COG: NMA1990 COG2999 # Protein_GI_number: 15794872 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin 2 # Organism: Neisseria meningitidis Z2491 # 1 216 1 213 213 319 70.0 3e-87 MKLYIYDHCPFCVRARMIFGLRGVEVENIILANDDEDTPIGMIGAKQVPILEKDDGTFMG ESLDIVHYIDETAGKGRLKTEVRPELQAWLDKVGEYNNHLAQPRLVKIGLPEFATESAVQ YFIDKKEKNIGNFETNLNETAQYLERLNQDLAQLETLTASGPDGIGGEIGMEDILTFPIL RNLTVVRGVQWPAKIADYLARMSAQSGVPLYFDRAL >gi|289656347|gb|ADEA01000020.1| GENE 58 52107 - 53006 1366 299 aa, chain - ## HITS:1 COG:HI0223 KEGG:ns NR:ns ## COG: HI0223 COG2962 # Protein_GI_number: 16272186 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Haemophilus influenzae # 6 298 5 298 300 211 42.0 2e-54 MPSETMPQTAKGVLAAVASNVLFAMLFLYSSWMKPMNGTDVFAWRMVGMLFALFALASLT HSWQGALNFAAGIGKDWKRWLLVILPTPILASQLWLFVWSPVNGEGINVAMGYFLFPLAM MLVGRIWFKERLGGPQRLAVTLACAGVACQLWRNGAFSWATVWVFGTYPLYYLLRRKLGV PSLIGLLIDLIIITPCMLVYIVFFSDSPGMIAAQPNLIAFIVLIGINSALAMYLNLQANN MLPMAVFGMLSYLEPILLFVIAVLWLDEPLENSALAGYGLIWLGLSVMIANSLIRMKKK >gi|289656347|gb|ADEA01000020.1| GENE 59 53050 - 54420 2040 456 aa, chain - ## HITS:1 COG:NMB1422 KEGG:ns NR:ns ## COG: NMB1422 COG0513 # Protein_GI_number: 15677281 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Neisseria meningitidis MC58 # 2 455 3 455 457 729 83.0 0 MNPFASLGLGSEIVSALTEQGYETPTPIQTAAIPKALAGHDLLAAAQTGTGKTAAFMLPS LERLKRYATASTSPAMHPVRMLVLTPTRELADQIDQNVQGYIKNLPLRHTVLFGGVNMDK QTADLRAGCEIVVATVGRLLDHVKQKNINLNKVEIVVLDEADRMLDMGFIDDIRKIMQML PKQRQTLLFSATFAPPIRKLAKDFMNAPEIVEVAAQNTTSSNVEQHIIAVDALKKRNLLE RLIVDLQMNQVIVFCKTKQSVDQVTRDLVRRNLAAQSIHGDKSQQSRLETLNAFKEGSLR VLVATDVAARGLDIAELPFVINYELPTQPEDYVHRIGRTGRAGADGVAISLMDKTEQKMF EAIKELTGNDLAVERIEGFEPQWWGGADTASSEESRPSESRRERRRDNARKAGERSDKPH ADKTDPGAACGKIAGRNRRSRRERQPCALLQPNYGA >gi|289656347|gb|ADEA01000020.1| GENE 60 54655 - 55431 781 258 aa, chain - ## HITS:1 COG:NMA1965 KEGG:ns NR:ns ## COG: NMA1965 COG2186 # Protein_GI_number: 15794848 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Neisseria meningitidis Z2491 # 1 258 1 258 260 437 84.0 1e-123 MAKLVRPQKVSDQVLSVLEERIAASIYEEGGKIPPERTLAEEFGVSRPSVRVALNILIAR QVLEARQGDGYYVSVKPQQDFLQSWQELLGKHSNWETDVFDFSCHVEGCMASLAAERRTD ADLKRIDFWRQKFESACESGHLEHQTEADVSFHQTIADAAHNILFSHLSGGLLKMLYRQT RSSIIYFNQTEDPRPKLIAQHRAIYEAILERRSADAAEAAKIHLNYVANSILQNREYKSR NEHADTLAQNDLKRVQDW >gi|289656347|gb|ADEA01000020.1| GENE 61 56308 - 56589 354 93 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298369529|ref|ZP_06980846.1| ## NR: gi|298369529|ref|ZP_06980846.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 93 1 93 93 95 100.0 1e-18 MKKLLISTIAAGLMLSACASNKSAEENQAPQQMSVEEAKQQCQQAGGAGQDSATFDACMK GKGFERVSVPAQAAPAPTQEAAPATAPAVPAKK >gi|289656347|gb|ADEA01000020.1| GENE 62 56829 - 58268 589 479 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 [Campylobacter concisus 13826] # 1 468 1 457 460 231 33 1e-59 MKNITFKPVLSVLAAAVALSACTMIPKYEQPAVNVPETFKYDTQAGTGIQAASLGWQDYF ADPRLYRLIDIALERNTDLRTAALNAEGLRKQYMISRADLLPGINATGSGSRGRTAKDLS STGNSYVSSAYNVGLGVTSYELDLFGKVRSNTQAALQTYFSSLAARDSAHLSLIASVAKA YFNELYAQDSMKLAQNVLKSRERTFKLTQLKHKAGVISAVDLSQQQALIESAKADYENAV KNREQARNALAVLINGPIPEDLPAPLPLDKQFKITKLPAGLSSEVLLNRPDIRAAEFDLK KANANIGAARAAFFPSISLTSTIGTGSTELSGLFKGGNRTWAFAPTINLPIFNWGSNKAN LDYAKIQQQVQIVNYEAAVQSAFRDVSDALVAREQLDKTYAANRRQSKAYADALRLVRLR YKHGVSSALDLLDAERSSYGADTALLSNQLTRLENLADLYKALGGGLKRMTGETEGSSK >gi|289656347|gb|ADEA01000020.1| GENE 63 58322 - 61555 4579 1077 aa, chain - ## HITS:1 COG:NMA1969 KEGG:ns NR:ns ## COG: NMA1969 COG0841 # Protein_GI_number: 15794852 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Neisseria meningitidis Z2491 # 1 1064 1 1064 1067 1800 89.0 0 MAKFFIDRPIFAWVIAIFIIAAGIIGIRSLPVSQYPSVAAPTITLTATYPGASAQVMEDS VLAVIERNMYGVDGLDYMTTSADSSGSGSVSITFTPETDEDLAQVDVQNKLSEVLNNLPA TVQQYGVTVSKARDNFLMIVMLSSDVHSIEEMNDYAQRNIVPELQRIDGVGKVQLFGAQR AMRIWVDPKKLQNYNLSFSTVTNALSAQNVQISAGSIGSLPAVQGQTISATVTAQGQLST AEEFGNIILVSNTDGSNVYLKDVAKVSLGMEDYSASIRLNGVNTTGMAVMLSNSGNALAT ATAVQEKMATLKKYFPQGMSWKNPYNTSKFVDLSIQKVIHTLLEAIALVFLVMFLFLQNI RYTLIPTIVVPISLLGGFAFISYMGMSINVLTMFAMVLVIGIVVDDAIVVVENVERIMAT EGLPPKEATKKAMGQISGAVIGITAVLISVFVPLAMFSGATGNIYKQFALTMAASIAFSA FLALTLTPALCATMLKPIPKGHHEEKKGFFGWFNKKFTAWTHGYEGWVAKVLRKTFRMMI VYIGLAVVGVFLFMRLPTAFLPTEDQGFIMVSVQLPAGATKERTDATLAQVTQLAKSIPE IENIITVSGFSFSGSGQNMAMGFAMLKDWNERKTPGSDAESVAGKLTGMMMGTLKDGFGI AVTPPPIMELGNGSGLTINLQDRNNTGHAALLAKRNELIQKMRASGLFDPSTVRASGLED ASQLKIDINRAAAAAQGISFSDIRTALATSLGSSYVNDFPNQGRLQRVMVQADANSRMQP ADILNLTVPNSSGVAVPLSTIATVSWENGMEQSVRFNGYPAMSLSASPATGVSTGQAMAA VQKMVDEMGSGYSLEWGGQSREEAKGGSQTLILYALSIAAVFLVLAALYESWSIPLAVIL VIPLGLIGAALGVTGRNLFEGLLGKVPSFTNDIYFQVGFITVMGLSAKNAILIIEFAKDL QAQGKSALQAALAAAHLRFRPIIMTSFAFILGVVPLYIASGASSASQRAIGTTVLWGMLI GTILSVFLVPLFYVIVRKFFKETAHEHEMAAKHAAESGATMIEDIPFEDEEDSDKKH >gi|289656347|gb|ADEA01000020.1| GENE 64 61567 - 62841 1352 424 aa, chain - ## HITS:1 COG:NMA1970 KEGG:ns NR:ns ## COG: NMA1970 COG0845 # Protein_GI_number: 15794853 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Neisseria meningitidis Z2491 # 8 424 7 412 412 464 69.0 1e-130 MTLHVSNKMLRVAAIAAATALALSACGKSEDKAGQQGGAAAGQQAPAPEVRVVTVHPQQV TISTDLPGRLESFRSAGVRAQVGGIIKKRLFQEGSYVKAGQPLYQLDDATYVASLESARA QLATAEASLAKANADLTRYKPLVAADAISKQDYDAAVASKRSGEASVKSAKAAIKSAQIN VGYSRITAPISGYIGQSKVSEGSLVGANDSTVLATIQQTNPMYVNLTQSATDVMRLKQDI ADGKMQAVNGAVEVSILLENGTEYPHKGRLLFADPTVNETTGQVTLRAEVPNKDNVLLPG LYVRVRLPQADIADSFVVPQQAVTRGTKDTVLIVNAKGEMEPREVTVARQQGTNWIITAG LNDGDKVVVEGTSIAAMSGAKKVTPKEWTPSESKSAASAPQSAASSAKPAAQTASEAKPA SAAK >gi|289656347|gb|ADEA01000020.1| GENE 65 63105 - 63743 679 212 aa, chain + ## HITS:1 COG:NMA1971 KEGG:ns NR:ns ## COG: NMA1971 COG1309 # Protein_GI_number: 15794854 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Neisseria meningitidis Z2491 # 1 210 1 210 210 317 72.0 1e-86 MRKTKIEALKTKEHLMLAALDTFYKKGIARTSLNEIAQAAGVTRGALYWHFKNKEDLFDA LFQRICDDIESCMQQDLESNAGECWPNFRLTLLKFFQRLENNSMHYKFHNILFLKCEHTE QNEAVIAMANKHQLLWREKITTILSASIRQNALPEDLDIDMAVIFLNSMLDGLIWRWFTS PQSFDLGTTAPRMVEIALDNLQNHPQLRKQAN >gi|289656347|gb|ADEA01000020.1| GENE 66 63812 - 64330 666 172 aa, chain - ## HITS:1 COG:NMA0412 KEGG:ns NR:ns ## COG: NMA0412 COG3265 # Protein_GI_number: 15793417 # Func_class: G Carbohydrate transport and metabolism # Function: Gluconate kinase # Organism: Neisseria meningitidis Z2491 # 1 172 1 172 172 276 76.0 1e-74 MTVHFVMMGVCGCGKTTAALALQRFLNGCPYAEGDEFHTQENRDKMGAGIPLTDEDRYPW LCRLRDWMTERSREGVAYSVVTCSALKRSYRDILRGAEGKVVFVHLTPPQEVNLQRMMAR KGHYMKAGMLDSQLEILEELDADEYGVKIGNPGTPEEVEADITAWVEKEGLV >gi|289656347|gb|ADEA01000020.1| GENE 67 64355 - 65740 2174 461 aa, chain - ## HITS:1 COG:NMA0413 KEGG:ns NR:ns ## COG: NMA0413 COG2610 # Protein_GI_number: 15793418 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism # Function: H+/gluconate symporter and related permeases # Organism: Neisseria meningitidis Z2491 # 1 461 1 461 461 637 85.0 0 MENWTQTLSAGTLLGIAAGAVLLILVLIVKFRIHALLTLILVSLATAVATGLPMNHIVND VLVKNFGGTLGSVALLVGLGAMLGRLVETSGGAQSLADALVRAFGEKRAPFALGVASLIF GFPIFFDAGLMVMLPIVFATARRMKQDVLPYALASIGAFSVMHVFLPPHPGPIASAEFYG ANIGHVLIIGLPVAFIAWYFSGYLLGKVLGRTIHVPVPDFLSGGAQDADQPQEPASAATV IGILLIPMVLIFLNTGLATLISEKVVDAGESWVQILQMLGSTPVALLISVLAAMFVLGRK RGDKASALEKTIDGALGPVCSVILITGAGGMFGGVLRASGIGKALADSMADLGIPVLLGC FLVALALRVAQGSATVALTTAAALMAPAVAAAGFSDWQLACVVLATAAGSVGCSHFNDSG FWLVGRLLDMDVPTTLKTWTVNQTLIAAIGFALSALAFVLV >gi|289656347|gb|ADEA01000020.1| GENE 68 66105 - 66614 719 169 aa, chain + ## HITS:1 COG:NMA0623 KEGG:ns NR:ns ## COG: NMA0623 COG0597 # Protein_GI_number: 15793613 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Lipoprotein signal peptidase # Organism: Neisseria meningitidis Z2491 # 1 162 1 162 165 223 70.0 9e-59 MSSAPSSKIPYFLLSALAVASDQFSKLAVLESFRFMERLNIVPGFFDLTLVYNTGAAFSF LADQGGWQKFFFLVLAAVISLYLARAIWRDDFGRWGKIGAAMIIGGAVGNVIDRLLYGHV VDFLLFYWQDWFYPAFNIADSFICVGAVLLVVDGLKNKKPSENGNKEKQ >gi|289656347|gb|ADEA01000020.1| GENE 69 66630 - 67598 438 322 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227371337|ref|ZP_03854821.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SSU ribosomal protein S1P [Veillonella parvula DSM 2008] # 6 304 3 301 632 173 34 4e-42 MSEKTIILANPRGFCAGVDRAISIVERALEEFGAPIYVRHEVVHNKFVVDNLREKGAVFI ENLSEVPAGATLIYSAHGVSKAVQEEAKARGFRVFDATCPLVTKVHKEVARLDAQDCEII MIGHKGHVEVEGTMGQLPPGKMFLVETVEDVARLEVRNPDKLAYVSQTTLSVDETKDIIA ALNARFPNIRNPHKEDICYATTNRQKAVKELAEECDLVIVVGSPNSSNSNRLREVAALRG VDAYMVDNAGYLRREWFEGKNKVGVTAGASAPEVLVKEVLQTIQEWGHETIREGEGAEES IVFVLPKELRREGENKQALNKG >gi|289656347|gb|ADEA01000020.1| GENE 70 67677 - 68582 1247 301 aa, chain - ## HITS:1 COG:BS_rbsK KEGG:ns NR:ns ## COG: BS_rbsK COG0524 # Protein_GI_number: 16080645 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Bacillus subtilis # 7 298 4 293 293 234 48.0 2e-61 MFKQVRVAVVGSINMDLVTNAPRFPRMGETLLGTDFNRFMGGKGANQAVAAARLGADVRM IGAVGDDGFGYEMLTNLDREGVCSDCVKTVQGYSSGIANITVAGGENSIVAVSGANFALT PEDVLAHEETIAGSDVVLSQLEIPMECVITAAKLAQKHGRPFVLNPAPAQRLPQELLELT TLLTPNTYELAASLGLPQDMSAEELISRSPCPVLMTVGEKGAVYNDEQGVLHYVPSFPVT PVDSTGAGDTFNGAFAVYWKEGMETAVRKACAAAAVSITQNGAQSGMPSEEELEEFLAIR R >gi|289656347|gb|ADEA01000020.1| GENE 71 68984 - 69787 1069 267 aa, chain - ## HITS:1 COG:PA5021 KEGG:ns NR:ns ## COG: PA5021 COG3263 # Protein_GI_number: 15600214 # Func_class: P Inorganic ion transport and metabolism # Function: NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain # Organism: Pseudomonas aeruginosa # 1 267 268 529 538 138 35.0 1e-32 MLVARPAAVFGGLWKFHYSLREKAYISWLGLRGAVPISLAMMPLVMGVPNSKLLFDVAFA VVILSLLIQGTTIPVMARWLKVAVPPKPEPKDTRDIWLAERESVRLTAYRVAADSEAEGM HPDKVAPIFSSFELRCFALIRGGGRIALHGDTALQAGDTAWYILPEEQVDNMARYFTETG SSVRMNFNFFGEFIVDPAGRAGDLAQAYGLRLNDGEESLSLYELFEIRADSKYPVEGDRI EIGGFMLIVKELDKNGTIKWLGLKCPQ >gi|289656347|gb|ADEA01000020.1| GENE 72 69723 - 70850 1117 375 aa, chain - ## HITS:1 COG:VC2703 KEGG:ns NR:ns ## COG: VC2703 COG3263 # Protein_GI_number: 15642697 # Func_class: P Inorganic ion transport and metabolism # Function: NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain # Organism: Vibrio cholerae # 49 342 6 298 581 281 53.0 2e-75 MGRPTENSLRRLCRPACGVAGKTHCFHDKILKISHAYHDNGRAGKLDWMNSLFLLCGALL FLSVVSTTLSARLGMPLLLVFLAVGMLAGEDGIGRVDFDNFVQANVISQLALAVILLDGG LRTRLESFRIALKPSAVLATWGVFATVLLLGLFTTFYLGSDWKFGILMAAIVGSTDAGAV FSLLRNSGVRLNERVQATLEIESGANDPMAVFLVTALISLIMQPEQSGVLSFLWMLVRQL GFGLLLGWLGGKILAKLVGRLNLAEGLYALMIVSGGLLVFAFTNLIGGSGFLAVYLAGII VGNQHSRATEHVLRVMDGLAWLAQATMFVVLGLLVTPTSVLEKRRGRAGHRRVPDAGGTS CGRVRRLVEIPLQPA >gi|289656347|gb|ADEA01000020.1| GENE 73 70904 - 71776 1372 290 aa, chain + ## HITS:1 COG:STM1989 KEGG:ns NR:ns ## COG: STM1989 COG2354 # Protein_GI_number: 16765325 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 277 1 292 303 282 57.0 5e-76 MAFASLFTLLDDITSVLDDVALMTKMAAKKTAGVVGDDLALNANQVTGVSADRELPIIWA VAKGSLVNKIILVPLALLLSFFLPAAITPLLMIGGAYLCFEGVEKLLHKFLRSDGHEEAG SPAETLDEKTKIKGAIRTDFILSAEIIIIALGVVERYDAVTQSLVMAAIGVGMTIFVYGL VGVIVKLDDLGMFLMKKDSGAAKTLGRGLIAFMPWFMRTLSVVGTLAMFLVGGGLIVHNF APLHHFLEARHWADGLAGNIAGLVTGLVSGAIVCAVVLPLLHLANKGKSH >gi|289656347|gb|ADEA01000020.1| GENE 74 71831 - 73372 2337 513 aa, chain + ## HITS:1 COG:NMB0713 KEGG:ns NR:ns ## COG: NMB0713 COG0815 # Protein_GI_number: 15676611 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Apolipoprotein N-acyltransferase # Organism: Neisseria meningitidis MC58 # 1 512 11 523 524 730 69.0 0 MKPIRTLETYWRQPRFYWPLTVIIAAATPLTFAPYYHFWLMPLLFGALVRLTELRPERAA ATAYLYGLVGYAAQFYWIHTAMHDVSGLSNLYAVPITFLLPAFLALYPALCFRLLRMFRY PRAVNIGIILPLLWTLAEFARERLLTGFGWGALGYSQIVPNSPLAGFAPVGGIHLVTLAT ACTGAWLVLLIDNTGRLKKRLLPLAGIAALCGTGYALQQTDFTRPDGSTATVALIQGNIE QTFKWHEDQIVPTIQKYYALLGQTKADIVIMPETAIPVMRQDLPPDVLVKFAEQADGNNS ALALGISQYTADGGGYENAVVNLSGYRDGGKTPPYYAKDHLVPFGEYKPLKFITEPLYRL MDMPLADFRRGGGRQMPLEMKNQKIAFNICYEDGFGDDLIATAKHSTLLANASNLAWFGG SNAMYQQLQQSQARAMELGRYMVRATNTGATAIVSSKGAVLAAAEPNTDAVLEGIVKGHT GETPYMKLGGSWPLICLLAGTVLFLYLLQKKQK >gi|289656347|gb|ADEA01000020.1| GENE 75 73676 - 74539 1568 287 aa, chain + ## HITS:1 COG:NMA0917 KEGG:ns NR:ns ## COG: NMA0917 COG0568 # Protein_GI_number: 15793882 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Neisseria meningitidis Z2491 # 1 287 4 290 290 506 93.0 1e-143 MNNAFALPAVHSGNGSLEQYIHTVNSIPMLSAEEESSLAERQQKGDLEAAKQLILSHLRV VVSIARGYDGYGLNQADLIQEGNIGLMKAVKRYEPSRGARLFSFAVHWIKAEIHEFILRN WRLVRVATTKPQRKLFFNLRSMRKSLNALSPKEAQEIADDLGVKLSEVLEMEQRMTSHDI GIMADNSDDEDSFAPIDWLADHDAEPSRQLAKQAHYALQTEGLQNALAQLDDRSRRIVES RWLQDDGGLTLHELADEYGVSAERIRQIEAKAMQKLRGFLAEEAAAV >gi|289656347|gb|ADEA01000020.1| GENE 76 74709 - 75962 1905 417 aa, chain + ## HITS:1 COG:NMA0760 KEGG:ns NR:ns ## COG: NMA0760 COG0373 # Protein_GI_number: 15793735 # Func_class: H Coenzyme transport and metabolism # Function: Glutamyl-tRNA reductase # Organism: Neisseria meningitidis Z2491 # 1 414 1 414 415 644 84.0 0 MQLTAVGLNHQTAPLSIREKLAFAAESLPEAMSSLARSEAAREAVILSTCNRTELYCIGE AERIIEWLAQYHGLPAEEIRPYLYTLDSGETVRHAFRVACGLDSMVLGEPQILGQIKNAV RIAQEQESINSGLNALFQKTFAVAKEVRTDTAVGANSVSMASASVKLAEQIFPAIADLNV LFIGAGEMIELVATYFAAKNPKLITVANRTLPRAQELCDKLGLNAEPCLLSELPAILHEY DVVVSSTASQLPLVGKGMVESALKKRHSMPVFLLDLAVPRDIEAEVAELNDAYLYTVDDM MDIVQSGKDARQKAAAEAEAMVEEKVAEFIHRQQSRQSVPLIRALRDEGERARRQVLENA MKQLAKGTSAEEVLERLSIQLTNKLLHSPTRTLNKAGSENSGLVDAVAQIYQLDHHD >gi|289656347|gb|ADEA01000020.1| GENE 77 76081 - 77025 1169 314 aa, chain + ## HITS:1 COG:PM0311 KEGG:ns NR:ns ## COG: PM0311 COG1518 # Protein_GI_number: 15602176 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair # Organism: Pasteurella multocida # 4 313 6 319 326 472 69.0 1e-133 MPAYIPSSDLKTILHSKRANLYYLEHCRILVNGGRVEYVTEQGKESLYWNIPIANTTCIL LGTGTSVTQAAVRELSKAGVVIGFCGGGGTPLFAGCEVEFFSPQSEYRPTEYLQRWCGFW FDDAKRLAAAKHLQAARLKTVAQIWPQTDWQPDSDILNGLLRRYEKEFQTAPDNQSLLAA EGRFTAKLYSIANRATLNDATFKRSTRGESDDAANKFLDHGNYLAYGLGATACWVLGLPH GLAVLHGKTRRGGLVFDAADIVKDALILPQAFISAAEGDNEREFRQRCIERLVHFEALDI IIDTLKSIAAESSK >gi|289656347|gb|ADEA01000020.1| GENE 78 77364 - 80723 3970 1119 aa, chain + ## HITS:1 COG:PM0312 KEGG:ns NR:ns ## COG: PM0312 COG1203 # Protein_GI_number: 15602177 # Func_class: R General function prediction only # Function: Predicted helicases # Organism: Pasteurella multocida # 1 1113 1 1106 1106 948 49.0 0 MNILLISQCSKNALKTTRRILDQFAERCGERTWQTPITEAGLDTLHRMLRETARKNTAVA CYWTRGRNRTELLWIVGDRRQFNAQGRVPTNRSRRDILRSEHETAWRHGASIQIAATLAA LLHDLGKATGFFQNKLKTRTPSADHYRHEWLSLRLFQAMITGCRTDAEWLGRLKNWPQYL AKHPHWYKNFGASDKNPKGDYDFTFPPLARWIAWLIVSHHRLPFYPDYPDYDHPGNTFKK GWEDARTRQTVGEFFKRLEPADHWVRNSAAKINKTSFFSLQADPTTSPLWQKQAAFWADR ALQHRPLAEWCEQNQDHSDAPADPLFLHLSRLCLMVGDHNYSALPPNDAGRLKGVSELYA NTDKDKEKRPKQKLDEHLCGVAKLTARFARLLPLLPRELPALGNHRPFRKPTANPRFQWQ NKAFDLSRRFQTASAKQGFFGVNLASTGCGKTLANARIMYALADPNRGARFTIALGLRVL TLQTGLALRQRLELEENESLATLVGGGAAKELFARRADDSPPEKENGPTPEETGSESAEG LLDGKAFTDISDCPIDDKIFGTLIADTTARRLLHTPVVTCTVDHLMQLCEQQRGGRYIVP MLRLLGSDLVLDEPDDFSTEDLPALSRLVYWAGLLGSRVLLSSATLTPDMVIGLRDAYRD GRRIWNEHQGLPQEPVVCAWFDEFDQHIGAYRREEFIRQHEAFCRNRSEKLAAQPVRRRA EWLDIDSTDPATLAAKLLERAITLHRRHSQTDPASGKNISVGLIRFANINPMVKYAQAMF GLTPPDDTALHIACYHSQQLLLLRSNLECRLDTLLDRKDPAELFAHRDIQTALAQSPARN HIFIVFGSPVTEVGRDHDYDWAIIEPSSMRSLIQLCGRVWRHRPHLSAAEHANIAILSRN IKAMTRSPEKPAYCRPGFESKNAMLSSHDAQTLISSEETGHINSIPRLHRPMPSEKPKSR SESLTELEHRVMADILNNPQRFTALYRQPGNAAPLTAHHAKISPFRSGRPQTDYVAFWDA EDEKIAFKTSENAEHYGGSKDGRDTEVDFKLTAAPSPTAAVFPWLCQSLPDALAKEADGD TPEALAAAAQKYAVVSLNIDSEKWCYNEWSGFWHDTEQT >gi|289656347|gb|ADEA01000020.1| GENE 79 81033 - 81509 419 158 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|260424756|ref|ZP_05778997.1| ## NR: gi|260424756|ref|ZP_05778997.1| conserved hypothetical protein [Dialister invisus DSM 15470] # 27 116 5 94 123 72 48.0 9e-12 MQNFIVFSKLPVRQVTYPPGTFVAGRISKLPVRQVTCCIPIMSALKFSKLPVRQVTHLIS LNSTSIISKLPVRQVTYVLGPHRSACFSKLPVRQVTECLEKCAAYQLSKLPVRQVTQFII VVIGVGISKLPVRQVTRFGLQFSLSTFSKLPVRQVTAL >gi|289656347|gb|ADEA01000020.1| GENE 80 82415 - 82645 244 76 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MHTQHHNRSINLIPRIPGTFWVKSKNGNGQTYTIFAAHSNNMYQAVRSADKSLWTQNSLD IIWIETLADCDVALVA >gi|289656347|gb|ADEA01000020.1| GENE 81 82676 - 84028 1455 450 aa, chain + ## HITS:1 COG:no KEGG:APL_0218 NR:ns ## KEGG: APL_0218 # Name: not_defined # Def: hypothetical protein # Organism: A.pleuropneumoniae # Pathway: not_defined # 4 443 2 442 449 346 46.0 1e-93 MPDISTAQVRAAILGFLQSQHEKKAEADLKKLAKAEEAGDEAEIASLQTALSALKTKYGL DAWLEQDAVRFAAQLKFGSHIAKGVHPDSKGDNVNFQAGFDLPASLAGSQSLRKAEAELD ANGNAAALPLAAFFDTVVDEASQSTLLDLLLQDHPALKGAFADDPERSDRYRQVFQTALQ AQTDTPAAHERNKQVLWPLGGDAAAADRYITLIPLHPASLTHSLYRKVNELRFGEENVQA RKNRREGKGSQTAHAVFSPLAYVKLGGTKPQNVSLLTSRQGGRNYLLPSLPPQYERPKQL HFSRKSNSFFNNGLRYLCRSGYHTLTDAVKAKKNKKDTRLLREQALEQMVRQIVVVSEHL RETQPAGWTDDYRLETNHKHWLDRKYPLSDGPDGWQEKIADDFGKWLQDLLRKNFQSIKH DFDEIEYAQWCKTLADALKAAQRRNKRRAA >gi|289656347|gb|ADEA01000020.1| GENE 82 84025 - 84996 1146 323 aa, chain + ## HITS:1 COG:no KEGG:APL_0217 NR:ns ## KEGG: APL_0217 # Name: not_defined # Def: hypothetical protein # Organism: A.pleuropneumoniae # Pathway: not_defined # 4 319 5 317 319 307 51.0 4e-82 MNTDFYLLFDRVEIQGANCISSPLTYGFPALSGFLGAIHALQRRLPQDCGLTLGGVLIAC HRCSPQIFRADAYSDATFIQSRNPLKKDGSTASIIEEGKTDLTVSLVVEVGGAPNDIRKN KEQRETLLQSLLQQQRIAGGSVRHIERTALYESYQAEELKAALFPAYILADAGNDLAAIT QELQLGCRVTADKDGGTAVYEDRPTGLPPQPEATALDALFATAQFFHLPPDDEHPQWHSY HIRQGRGWLVPIPVGYQAIAPEHAAGVMQHVRNPEYPSRYVETVYSLGKWLFPNKLSDGL HAYFWRYAPPQDNLYLITQTTRP >gi|289656347|gb|ADEA01000020.1| GENE 83 85012 - 86013 1791 333 aa, chain + ## HITS:1 COG:no KEGG:APJL_0217 NR:ns ## KEGG: APJL_0217 # Name: not_defined # Def: CRISPR-associated protein # Organism: A.pleuropneumoniae_JL03 # Pathway: not_defined # 1 333 1 331 331 438 66.0 1e-121 MAKPETPSLLAFERKLDCSDAVFSQTDGNNPEAQEQPVTVSEKSVRGTISNRLKNAIAND PAKLDAEIEKANLQTVDVAALSSGCDTLIARFTLKVLPFDGSPYVCNGAQYRGRLLETAT QYLQTEGMQALAERYAANIANGRWLWRNRMGAENIRITVSNKNDSITVDNAKALPLDRFD RPSENVAKIAEWIRQGLSGEAFTLLSVEARVQAGYGQEVYPSQELILDTGKSNKSKVLYQ TGGKAGMHSQKIGNAIRTIDTWYAQDAAFPIAAEPYGAVTTLGTAFRQPKQKNDFYTLFD NWILKGEQPSAEQQHYVIGVLIRGGVFGASGKE >gi|289656347|gb|ADEA01000020.1| GENE 84 86017 - 86586 773 189 aa, chain + ## HITS:1 COG:no KEGG:PM0308 NR:ns ## KEGG: PM0308 # Name: not_defined # Def: hypothetical protein # Organism: P.multocida # Pathway: not_defined # 1 189 1 186 186 156 45.0 4e-37 MSSHYADLKAIPQAEMLQSQVVAHIVQTLHGLLPRFGGRIGIGFPAYGQNRTLGGIVRLF GSETDLDDLHCLLQNTGLSDYALIGRIEEVPSEKVYAHARFVRRQPKHGSDLRRAEKRMA AQDLPPEEIRRRLAAKAAKRSACTLPHIFLNSKSTRQRYLLAVDKKIAARTEGTFNSHGL SLGASVPLF >gi|289656347|gb|ADEA01000020.1| GENE 85 87414 - 87665 219 83 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSNRQSISKLPIRQVTIHFIRNSIKKISKLPIRQVTSSHLSSLPPAFSKLPIRQVTMTGT SLSSAKISKLPIRQVTFLTLLYE >gi|289656347|gb|ADEA01000020.1| GENE 86 87915 - 88193 142 92 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MCYLPNRQLRNIYDEVRKVEVSYLPNRQLRNPSFLLNRSFKSYLPNRQLRNSKYHFQKQN ESYLPNRQLRKKGRSNENHSFRYLPNRQLRKR >gi|289656347|gb|ADEA01000020.1| GENE 87 88263 - 88790 113 175 aa, chain + ## HITS:1 COG:no KEGG:CV_1749 NR:ns ## KEGG: CV_1749 # Name: not_defined # Def: hypothetical protein # Organism: C.violaceum # Pathway: not_defined # 28 155 1 128 129 68 42.0 7e-11 MLYVGCYLPNRQLRNISYSVPTRISCYLPNRQLRKPTNVCVCPGQCYLPNRQLRKIKKHQ KQIFLSYLPNRQLRNIYDEVRKVEVSYLPNRQLRNPYIQTLKELRRYLPNRQLRKSARFR AYARPSYLPNRQLRNFQAVPSKAVLRYLPNRQLRNVCSNIDPSFMRYLPNRQLRK >gi|289656347|gb|ADEA01000020.1| GENE 88 89500 - 89994 468 164 aa, chain + ## HITS:1 COG:NMA1903 KEGG:ns NR:ns ## COG: NMA1903 COG1495 # Protein_GI_number: 15794788 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Disulfide bond formation protein DsbB # Organism: Neisseria meningitidis Z2491 # 3 161 41 199 199 172 59.0 2e-43 MNFFRKTLWGIAALSVLTACGSFVSQYVLGMNPCVLCILQRLSVLAVGLAALSAAFFRQS SGLGRTVCALAVSIPAVYGAGVAVYQRYIQSLPPGTAPECGAPWTFRLRDWPLFEWYEPV IRGFGNCAVPDYLLGVPLPIWSVLYFCFVLLLVWFGWFKARAVG >gi|289656347|gb|ADEA01000020.1| GENE 89 90284 - 93136 4670 950 aa, chain - ## HITS:1 COG:NMA1934_2 KEGG:ns NR:ns ## COG: NMA1934_2 COG1003 # Protein_GI_number: 15794817 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain # Organism: Neisseria meningitidis Z2491 # 446 950 1 505 505 962 93.0 0 MKLSELFNPNEFAARHLSFGDEAALLEALGEKSMDDFVGNTVPQSIRMPSELDLPEALTE ADALAKLKAIAAKNVINKSYIGLGYYPTRVPNVILRNVLENPGWYTAYTPYQAEIAQGRL EALLNFQQVCIDLTGFPVAGASLLDEATAAAEAMAMAHRVGKVKSERFFVDERVYPQTLD VMKTRAKYFGFELVVGDFAKADEGEYFGALFQYVGKDGDVQDLQSVIGRLKTKGTIVAVA ADIMSLVLLKSPAELGADIALGNTQRFGVPMGFGGPHAAYFAFKDEFKRSAPGRIIGVSK DASGKPALRMALSTREQHIRREKATSNICTAQALLANLAGMYAVYHGPEGVKRIANRIHA LASVFADALVSDGLKVVHEVFFDTVAVDFGSKDKADKAFQTALELGYNLRRVSDTQIAAA FHETSVREDLAVLYYAFTGNNTFTLSDDVKGRLKTEFLRQDNILQHPVFNRYHTEHEMLR YLKKLEDRDLAMNRSMISLGSCTMKLNATAEMLPITWAEFTDIHPYAPETQTAGYRELLT DMENSLKAITGFDAISFQPNSGAQGEYSGMLAIRRYQEAQGEAHRNICLIPKSAHGTNPA TAAMLGLKVVVVDTDEHGNVNIDDLKAKAEQHRDALSAIMITYPSTHGVYEEGIRDICRI VHDNGGQVYMDGANLNAQIGIMQPAEVGADVLHMNLHKTFCIPHGGGGPGMGPIGLKDHL APFAPGHTLTDTHSASAGQTAVSSAAFGSASILPITWMYLTMMGKQGMEQATRWALLNAN YVAKRLSEDYPVLYTGKNGRVAHECIVDLRPLKAESGITETDIAKRLMDYGFHAPTVSFP VAGTLMIEPTESESKAELDRFIAALKQIKQEVLKVERGEWPKDDNPLVNAPHTAADVTGE WAHPYSREEAVFPLPFVRENKFWPSVNRVDDVYGDRNLVCSCPPTEAYED >gi|289656347|gb|ADEA01000020.1| GENE 90 93399 - 93935 815 178 aa, chain + ## HITS:1 COG:NMA2134 KEGG:ns NR:ns ## COG: NMA2134 COG1778 # Protein_GI_number: 15795005 # Func_class: R General function prediction only # Function: Low specificity phosphatase (HAD superfamily) # Organism: Neisseria meningitidis Z2491 # 1 178 1 178 178 311 85.0 6e-85 MQTLSPDLQARAAQIKLLILDVDGVLTDGRIFIRDNGEEIKSFNTLDGHGLKMLQAGGVQ TAVITGRDAPSVGVRIQQLGIRYYFKGISDKRAAYAELRKQADVEEHECAYVGDDVVDLP VMVRCGLPVAVPDAHWFTLQHAAYVTRRRGGRGAVREVCDLIMRAKGTLGAALSEYVK >gi|289656347|gb|ADEA01000020.1| GENE 91 93932 - 94513 656 193 aa, chain + ## HITS:1 COG:NMA2133 KEGG:ns NR:ns ## COG: NMA2133 COG3117 # Protein_GI_number: 15795004 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 193 1 193 193 277 66.0 7e-75 MKLRWRYGIAFPLILSVALGGLAAWLGRISEIQTEEVRLNPNEPQYSMKGINGRRFDEAG RLKENLSSPKAWQMPGSNDVHFSSPQLIFRKEGRLLYQVRSDEAVYNTENKQVVFDNNVI LTKEADAEHPAGVFKTSRLHVDTETEFAKTDAPVAYEYGQSHGTANGMTFDNKKSLLNFP SRVKATIYDAKNL >gi|289656347|gb|ADEA01000020.1| GENE 92 94494 - 95021 823 175 aa, chain + ## HITS:1 COG:NMA2132 KEGG:ns NR:ns ## COG: NMA2132 COG1934 # Protein_GI_number: 15795003 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 174 1 174 176 187 67.0 1e-47 MMRKTFKTAALSLLLASAPAFALQSDSKQPIQIEADQGSLDQAKQVTHFSGNVIIKQGTL NLRAANVRVSRNDKGEQFMAADGSPVKFSQTLDDNQGVVNGQANNAEYSSATGIVKLTGN AKVQRGGDVAQGAVITYNMRTEVYNIIGGGKSSAKAGTKSGRVSVVIQPSSTQKK >gi|289656347|gb|ADEA01000020.1| GENE 93 95115 - 95849 266 244 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 10 232 4 231 245 107 26 4e-22 MTETASRLVVQNLQKSFRKRQVVKNFSLEIESGEVIGLLGPNGAGKTTSFYMIVGLIAAD AGSVMLDGQELRHLPIHERARLGVGYLPQEASIFRKMTVEQNIRAILEISTKDKNRIDSE VERLLSDLNIERLRHNPAPSLSGGERRRVEIARVLAMQPRFILLDEPFAGVDPIAVIDIQ KIIEFLKSRGIGVLITDHNVRETLSICDRAYIISDGAVLAAGKPDELVNNEQVRSVYLGE NFKY >gi|289656347|gb|ADEA01000020.1| GENE 94 96047 - 97408 1891 453 aa, chain + ## HITS:1 COG:NMB0217 KEGG:ns NR:ns ## COG: NMB0217 COG1508 # Protein_GI_number: 15676143 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog # Organism: Neisseria meningitidis MC58 # 5 248 4 243 283 296 61.0 8e-80 MTQNFSLKLKQTQQLNQRLQQSLRILQMSGLEIEREVEDWLQDNPLLERHETEEFTDADF NSKISAALPRSGQIGGDDAEDAWLNIAAEEDFNTYLHKQVCEHPLSEKEAAHVHILIDFL DEQGYFTDSLEDVIDNTPLDWMLDEDDLQNALDLLQTFDPAGVAAADLTESLMLQLMRLP PSPARQLAAHLIQDSLHELGKNRQQNIARFRKSFPEAPVETIQTALDIIAALNPYPAYGF ASAEPTAYVQPDVWVKETASGWKVIGNDAAWPKIRLNKEYCDLLQEAGSGDAAWKDKLNE ARQKIDILELRKNTVIRLAEYIVAKQEDFFTFGEIGLTPMLLKDAAAELDVAESTVSRAA NQKYLACPRGIFALRYFFTQAVGTDSDNEGVSQGAIKAVISQLIDNENSSKPYSDEALVR LLKQQGIDIARRTVAKYRESLDIPPAHKRKTVG >gi|289656347|gb|ADEA01000020.1| GENE 95 97464 - 97778 269 104 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|56477354|ref|YP_158943.1| sigma 54 modulation protein / S30EA ribosomal protein [Aromatoleum aromaticum EbN1] # 1 94 1 94 107 108 52 2e-22 MNLKITGLNFDVTAAIKNHVTEKLERISRHASNVISVAITLSVEKVNHKAEADIHLAGKD LHVEAVEADMYAAVDVLMDKIDRAVLKYKEKSNDVRNTVKPAAE >gi|289656347|gb|ADEA01000020.1| GENE 96 97873 - 98580 834 235 aa, chain - ## HITS:1 COG:RSc1158 KEGG:ns NR:ns ## COG: RSc1158 COG0518 # Protein_GI_number: 17545877 # Func_class: F Nucleotide transport and metabolism # Function: GMP synthase - Glutamine amidotransferase domain # Organism: Ralstonia solanacearum # 1 227 1 230 242 206 55.0 3e-53 MAAIAVVRHVAFEDLGVLANLFARRGDKVAYYEAPEADFSDAALQDADLLVVLGGPVGAY DDALYPFVAAEAECIGRRLAAGKPILGVCLGAQLMARMLGAEVVPMATKEIGFSPLTLTE AGRRSPLRHLENIPVLHWHGDRYVLPAGAVRLAYTDVCGEQAFAVGDKVLGLQFHLEADA DRIEYWLVGHACELGVAGADVPQIRDDAAAFGALLRLAGEKTVSEWLSGALPDSE >gi|289656347|gb|ADEA01000020.1| GENE 97 98612 - 99322 542 236 aa, chain - ## HITS:1 COG:NMB1908 KEGG:ns NR:ns ## COG: NMB1908 COG0313 # Protein_GI_number: 15677739 # Func_class: R General function prediction only # Function: Predicted methyltransferases # Organism: Neisseria meningitidis MC58 # 1 236 6 241 241 395 86.0 1e-110 MNPVLYLIPTPLGAPDTPCLLPHEQVQIAGLTDFVVEAEKTARLHLKHLGVTAPIRELNL QTLNEHTDLKTLPDLLRPLQEGRSMGIVSEAGCPAVADPGANLVALAHARGFEVRPLVGP SSLLLALMASGANGQSFAFKGYLPSEKDGRIQALKALEQHSRKHGETQIFIETPYRNDAL LADAVGQLHPATRLCVACDLTLPTQTIISKAVADWRKLKEMPNLKKRPAIFVLYAA >gi|289656347|gb|ADEA01000020.1| GENE 98 99377 - 99967 610 196 aa, chain - ## HITS:1 COG:NMA0546 KEGG:ns NR:ns ## COG: NMA0546 COG0424 # Protein_GI_number: 15793540 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Nucleotide-binding protein implicated in inhibition of septum formation # Organism: Neisseria meningitidis Z2491 # 1 196 1 196 196 294 75.0 8e-80 MSEKLPLVLGSGSVFRRAQLERLGIAFQTASPDFDETPLAGEGARETALRLAEGKARSLA GRFPAALVIGADQVAWCGGRQLGKPMNVVAAQQMLAALSGKVIEFYSAIVLLNTATGRMQ RHADKTVVTMRELGEGDIRRYLEREPDAVYCAGAAKSEGLGAALLARIDSTDPNALIGLP LFRLIDFLRNEGVEIL >gi|289656347|gb|ADEA01000020.1| GENE 99 100021 - 100518 563 165 aa, chain + ## HITS:1 COG:NMA0545 KEGG:ns NR:ns ## COG: NMA0545 COG1399 # Protein_GI_number: 15793539 # Func_class: R General function prediction only # Function: Predicted metal-binding, possibly nucleic acid-binding protein # Organism: Neisseria meningitidis Z2491 # 1 164 1 165 167 241 78.0 5e-64 MSDLNLIDPKVFAEEKQKLQGSFRLGELDERVSSHDYPADSQTEISFTLQGGRDSLQRLF LELTVKADMPLVCQRCIKPMPFKLDETSRIVLFADDESLDAAMLADDELEGILTEKELDV RELVEDQILMALPFSPRHEECGNVPLAQINQDKPNPFAVLAGLKK >gi|289656347|gb|ADEA01000020.1| GENE 100 100570 - 100749 307 59 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15677742|ref|NP_274905.1| 50S ribosomal protein L32 [Neisseria meningitidis MC58] # 1 59 1 59 59 122 98 7e-27 MAVQQNKKSPSKRGMHRSHDALTSPALSVDSTTGEVHRPHHISPNGMYRGRKVVKAKGE >gi|289656347|gb|ADEA01000020.1| GENE 101 100923 - 101450 692 175 aa, chain + ## HITS:1 COG:NMA0543 KEGG:ns NR:ns ## COG: NMA0543 COG2236 # Protein_GI_number: 15793537 # Func_class: R General function prediction only # Function: Predicted phosphoribosyltransferases # Organism: Neisseria meningitidis Z2491 # 1 174 1 174 175 316 87.0 1e-86 MKQKIWYTYDDIHRVIKNLAEKIRAAGIKYDAMIAIGGGGFIPARMLRCFLEIPIYAVTT AYYDSDNEGQVTEEIKKVQWLDPVPEVLEGKNVLVVDEVDDSRITMEFCLNEFLKEKFNT VGVAVLHEKIKAKTGKIPDGIPYFSGLTVEDLWINYPWDAENIDEHNRLAAESKR >gi|289656347|gb|ADEA01000020.1| GENE 102 101632 - 102699 1416 355 aa, chain + ## HITS:1 COG:NMB1913 KEGG:ns NR:ns ## COG: NMB1913 COG0416 # Protein_GI_number: 15677744 # Func_class: I Lipid transport and metabolism # Function: Fatty acid/phospholipid biosynthesis enzyme # Organism: Neisseria meningitidis MC58 # 1 342 1 342 351 486 79.0 1e-137 MITLAVDAMGGDSGLAVTAPGAAAFLKQQRDVRLIMVGDEAAVRKALAEAGAPMERITIQ HATQVVEMDEAPQSALKNKKDSSMRIAINQVKEGNAQAAVSAGNTGALMATARFVLKTMA GIERPAIAKFIPSAGNHMTLVLDLGANVDCNADQLTQFAVIGSELFQALYPEKGRPRVGL LNVGTEDIKGTDTAKQTFKLLRGSKLNFVGNVEGNSVFTGEVDVVVADGFVGNIMLKTIE GAVKFMGSAIREEFQRTLFNKLAAVAAIPALKGMKNKLDPRKFNGAIFLGLRGVVIKSHG GTDQTGFMYALEEACHEARAASLSKIEQGVAVQLAALDEARAQEAAEGETANETQ >gi|289656347|gb|ADEA01000020.1| GENE 103 102914 - 103876 1408 320 aa, chain + ## HITS:1 COG:NMB1916 KEGG:ns NR:ns ## COG: NMB1916 COG0332 # Protein_GI_number: 15677747 # Func_class: I Lipid transport and metabolism # Function: 3-oxoacyl-[acyl-carrier-protein] synthase III # Organism: Neisseria meningitidis MC58 # 1 320 1 320 320 540 84.0 1e-153 MQYAKILGTGSYLPANRISNDDLAQKVDTSDEWITTRTGIKFRHIADENEKTSDLAAESA RRALAAAGISADEIDLIIVATATPDMQFPSTATIVQHKLGMTNGCPAFDVQAVCAGFMYA LNTADAYVKSGMAKKVLVIGAETFSRILDWSDRTTCVLFGDGAGAVVLGAADEPGIIHGK LQADGNYLDLLNVPGQIANGQICGTPYIKMDGPGVFKFAVKMLAKVAEEVIREAGMTPDQ VDWLVPHQANKRIIESTAKHLGLGMEKVILTVQDHGNTSAASIPLALDAGIQSGQIQRGH NLLLEGIGGGFAWGAVLLKY >gi|289656347|gb|ADEA01000020.1| GENE 104 104093 - 105187 1018 364 aa, chain + ## HITS:1 COG:no KEGG:DNO_0162 NR:ns ## KEGG: DNO_0162 # Name: not_defined # Def: cold-shock DNA-binding domain-containing protein # Organism: D.nodosus # Pathway: not_defined # 198 273 8 83 210 84 48.0 5e-15 MEQKKYYGTIVHWFNDLHRGSILPDDSAQRIFADGQSLTADYLSPKSGDRVGFYLDAGEK QPVAHDVSPVPDYHPDEKTVITLEEWDFQQNGGYGSSKKNKGRPVFVLGQFLTDQARVPE IGELLEGRLCQHSNGQWLLKEAVILEQTVPAKKEPSPRVRPVAAELPKESIPLPPTAPAE ETVHKAQTQATTENLPVNRIIKGSIISWDDEKGYGFINYGSKTHNIFFHISAFHYTNRRP KTGQAVSFYCHPANGCGKQKAARVVLRGDEARLSDDRPQQSLPINIINLLGGIVASATYL GAVSLLSRKLAAVYLLVSAATFWYYREDKRIALKKTIKKTAATSAAFPKTCCTNSVCLAA GLAR >gi|289656347|gb|ADEA01000020.1| GENE 105 105145 - 105333 227 62 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|288575353|ref|ZP_05976785.2| ## NR: gi|288575353|ref|ZP_05976785.2| cold-shock domain protein [Neisseria mucosa ATCC 25996] # 1 62 368 429 429 98 66.0 1e-19 MHKLGLFGGWPGALIARNALNHKTSKVPFVRKFWLTAAVNIAITYALLIHYADKPFISLL RN >gi|289656347|gb|ADEA01000020.1| GENE 106 105342 - 106268 1404 308 aa, chain + ## HITS:1 COG:NMA0536 KEGG:ns NR:ns ## COG: NMA0536 COG0331 # Protein_GI_number: 15793531 # Func_class: I Lipid transport and metabolism # Function: (acyl-carrier-protein) S-malonyltransferase # Organism: Neisseria meningitidis Z2491 # 1 308 1 308 308 437 84.0 1e-122 MSFAFFFPGQGSQSLGMMSGFDGRTVVKATFDKAADILGQDLWAMINGSDADIIGQTVNT QPIMLAAGVATYRAYLEAGGKTPAAVAGHSLGEYTALVAADALSFADAVRLVRLRAELMQ AAVPQGAGAMAAVLGLEDEQVKALCAAAAQGEVVEAVNFNSPGQVVIAGHAAAVERAMNA AKEAGAKRALPLPVSVPSHCSLMKPAAEKLAEALQSMKIDRPKIRVIHNADVASYDDAEK IKDALVRQLYSPVRWTETVNALVSDGLTESAECGPGKVLAGLAKRINKEAICTALTNIEQ ITAFVETH >gi|289656347|gb|ADEA01000020.1| GENE 107 106691 - 108541 250 616 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 376 598 279 507 563 100 31 3e-20 MIEKLTFGLFTKEDSHNFMRLMDYVRPYKARIICALLAIFGVAATESYLAAFIAPLVNQG FAAPSAPPELNTAAGIVATLQNWKAQFTHMIWGTSNKVWIVPVFFIILVIIRGICRFVST YLLTWVSVMAISHVRRDMFNKMLLLSSKFHQETPPGTVLMNLVHMAEQSISNASNVFIVL TRDTMIVIGLVCVLLYLNWQLSLIVALMFPLLSLLSRYYRNRLKSIIASSQLSIGTMNNV VNEVHQGHRVVKLFGGQRQAAERFTAVNDTIVRLGKKITQATAARSPFSELIASFALAVV IFIALWQSQKGYTTIGEFMAFIVAMLQMLSPIKNLANISIPMQTMFLASDAVCQFLDTEP EKDTGTQNLQNVSGRLKFENVDVRYREDGKKALDGFNLDIRQGERVALVGRSGSGKSTVV NLLPRFVEPSAGAIYLDGINIADVRLTDLRAQFALVSQDVFLFDDTLLANVRYSRPEASE EEVSAALKAANLQDLVENSPHGLHQPIGANGNQLSGGQRQRVAIARAILKDAPILLLDEA TSALDNESERLVQQALERLMENRTSIIVAHRLTTVEQADRIIVMDDGRIVEQGSHSELMA QNGYYAMLRNMPKITG >gi|289656347|gb|ADEA01000020.1| GENE 108 108629 - 109471 431 280 aa, chain + ## HITS:1 COG:AGl538 KEGG:ns NR:ns ## COG: AGl538 COG1216 # Protein_GI_number: 15890379 # Func_class: R General function prediction only # Function: Predicted glycosyltransferases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 72 231 89 255 306 104 33.0 2e-22 MRENPLISIGIITFNNSISEIKRCLDSIYGQTYNIEQIEIIIRNQGRSRVLQEIEALIQQ NNWQNIKAYQGENIGFGKGHNELFSRISPQSKAYICFNPDGFWHDEALDRLIAMAYINDW NGIFESIQEPIMHPKVFDAHTGVTAWCSGACLLIPTTIYKIINGYDEDFFLYCEDVDLSW RVKASGFNCYTCSESYFFHYAMERQSREQEIWKAASYLAHKWRSDKFKKIALQQWSKYYD VPESDLEKDIAALQQHSFEEVKRANPDFHHGLVFSQQMWS >gi|289656347|gb|ADEA01000020.1| GENE 109 109475 - 110443 263 322 aa, chain + ## HITS:1 COG:no KEGG:Ppro_3338 NR:ns ## KEGG: Ppro_3338 # Name: not_defined # Def: glycosyl transferase family protein # Organism: P.propionicus # Pathway: not_defined # 5 219 875 1082 1250 82 25.0 2e-14 MNKSLSIIIRTMPRREKFLDKCLFILTGQTYTSITIIVVCQKLKDTDSTEKIKNIIQKWK HYFQDIQYFEHTSKTDARSHSLNIGLDAVKSRFVAFLDDDDKVYPTHYENLIKPLIDDCV AWSYSDVILSKFNNNDQLIARETPFKRNGYSFLEHIKANFIPIHSFVMNYDKVKSIGKIN ETLDKHEDYDFLLRLAFKHEPIYVQGFSAEYCTRSDGSNTILAAGLTKTEFHKRCTQWET STRKLNDLKREQFGWWVDELEAQHFSVPFHPNSSNFNNVDAQTLLNRIYHSYTWEIIRFI KKLTGLSAVDLKNGAQYLVLQN >gi|289656347|gb|ADEA01000020.1| GENE 110 110662 - 112725 3121 687 aa, chain + ## HITS:1 COG:NMB1930 KEGG:ns NR:ns ## COG: NMB1930 COG0751 # Protein_GI_number: 15677760 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase, beta subunit # Organism: Neisseria meningitidis MC58 # 1 687 1 687 687 1130 95.0 0 MTTQTLLIELLTEELPPKALNNLGNHFTASVAEGLEKAQLIDGAAEFTAYASPRRLAVQV KNVKAVQADQKIVKKGPAVANAMKDGAPTKALEGFARGAGAKIEDLTIVHDGKQDVYAYE YVQTGKPLGELLEDIINQAVKKLPIPKVMRWGSSTFTFVRPVHRLIVLHGGDIVNVSVLG LQSGNQTLGHRFLSGGEITIENADSYAAQMREQGKVVASFAERKVAIQTALNEQAGRLKA TVAADEALLDEVTALVEYPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMN RFLLVSNLQTEDPSHIIQGNERVLRARLSDAEFFYKQDQKATLESRLPKLANVVYHNKIG SQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVTEMVGEFPELQGTMGKYYARL DGETEEIAEAVEQHYQPRFAGDNLPNGKVATAVALADKLETLVGIWGIGLIPTGDKDPYA LRRAALGILRMLMQYGLDVNELIQTTFDSFPKGLLNEKTPSETADFMQARLAVLLQNDYP QDIVAAVLAKQPRRLDDLTIKLQAVAAFKQLPEAAALAAANKRVQNLLKKADAALGEVDE SLLQQDEEKALYAAAQDLQPKITAAVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDPA VKQNRLNLLNRLAEQMNAVADIAVLGE >gi|289656347|gb|ADEA01000020.1| GENE 111 112901 - 113911 1078 336 aa, chain + ## HITS:1 COG:no KEGG:Psyc_1209 NR:ns ## KEGG: Psyc_1209 # Name: not_defined # Def: hypothetical protein # Organism: P.arcticum # Pathway: not_defined # 3 334 5 339 341 189 35.0 9e-47 MSKTIILAVPYMYGLDKCIEKNLRFHGFNVINLCYDDRDSYYPHIGCRILGLYHKHIKKD GDYKKKLKYSRYRKQIAEKLASLGGGKADYALCIRANIYPKEIISAIREHSKVCVNYQWD GIDRFPDIIEYLPYFDRCWVFNKNDVEKYPQHRFKATTNFYFDFPIDGNGKTEGLYFLGG YEAGREHQTSVFLDEARRLGLPLDFHIYCKDDRASKIFGNDGITYLDRQSILSFEQNLQK VKNCLAVVDFVQFENYGLSFRVFDALCFDKKLITTNQAVAECDFYHPDNIFIWDGENPEG LQDFFRRPYHPLPEEIKAKYAFGNWVRRILDISDEA >gi|289656347|gb|ADEA01000020.1| GENE 112 113921 - 114961 1414 346 aa, chain + ## HITS:1 COG:no KEGG:Psyc_1209 NR:ns ## KEGG: Psyc_1209 # Name: not_defined # Def: hypothetical protein # Organism: P.arcticum # Pathway: not_defined # 5 340 4 341 341 210 37.0 5e-53 MPTEQKTIILGMPADNQIYRVIEAALDHHGFNVVSVVMDNLNFRYPSLSCRLKIKFRQLV LRDKNAKKDFKSAQLIRDVENKLAAHGKADYALFIRGDIYSPEFLDMIKRHTRPGNMVNY QWDGIDRFPAIWDCVDRFDRIYVFDPADMRNPKHPFLPTTNFYFDHDVNLPENPPNDFYF IGWHMPDRAPIISAFGKAAETLGWKLDFNIGCLNTDVDTLRRFYPTENIKIFIGVRSFAD NLEAAKQAKILIDFKTPVHNGLSFRPFEALGYRKKLITTNAEIQKYDFYHPDNIFVWDGK SLDGLAEFVAKPYCELPSEIYQKYSFSNWLRYILNIPPHQKITLPE >gi|289656347|gb|ADEA01000020.1| GENE 113 115238 - 115984 257 248 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 9 243 4 238 242 103 32 4e-21 MSTQDLSGKVALVTGASRGIGAAIADTLAAAGAKVIGTATSESGAAAISERLAQWGGEGR ALNSAEPETIENLIADIEKEFGKLDILVNNAGITRDNLLMRMKEEEWDDIMQVNLKSVFR ASKAVLRGMMKQRAGRIINITSVVGVMGNAGQTNYAAAKAGLIGFSKSMAREVGSRGITV NCVAPGFIDTDMTRALPEETRKTFEAQTSLGKFGEAQDIADAVLFLASDQAKYITGQTLH VNGGMLMP >gi|289656347|gb|ADEA01000020.1| GENE 114 116286 - 118268 755 660 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 [Haemophilus influenzae 7P49H1] # 10 557 12 558 618 295 32 7e-79 MHEFSLAPIVIVLLVSVITVICCRKFNIPSMLGYLLVGFLAGPSMLSLIPKSDATDYLGE IGIVFLMFSIGLEFSLPKLKAMRRLVFGLGGLQVVVTMLSIMSILMLMDVQFNWAFAAAG ALTMSSTAIVSRILSEKTELGQPHGQMSMGVLLMQDIAVVPLMILIPALAGGNSGNLWLE LGLAALKMIITLGVLFIVGNKIMSPWFRLVAKRKSSELFMINVLLVTLGVAYLTELEGLS LALGAFVAGMLLSETEYRFQVEDDIRPFRDILLGFFFITVGMKLDIQALIGGWRQILILL AILLVLKALVVAIIAFRMKHPVADSLKSALYLAQGGEFGFVMLAISSKINMVSPELEQAA TAAILLSMIIAPFLLGASDTLINFFVKSNWDMKALDLHSMLVETMNKSDHVLIIGFGRGG QTIGRILAQENIPYYALDLDVERVQVARSAGEPVSFGDAKRREVLEAAGLNRAKVVVITL NNMHETQHVLDNIMSLHPTMPVYVRAVNDDYLKKFSDMGAEEAVSDTKETSLALASYAML ANGAPYTHVYQTITNIRRSRYASLEDLFVGSDDETSFSEESKNISRHAFPLAGEAYAIGK TIQDLPLAGNGIKLLFVRRNTSRLDSLEPDFRLQAGDILVVAGRKEEIISFENWSLQGNT >gi|289656347|gb|ADEA01000020.1| GENE 115 118798 - 119436 816 212 aa, chain - ## HITS:1 COG:no KEGG:Pnap_2987 NR:ns ## KEGG: Pnap_2987 # Name: not_defined # Def: OmpA/MotB domain-containing protein # Organism: P.naphthalenivorans # Pathway: not_defined # 93 212 60 179 179 115 60.0 8e-25 MANDEHKEQRLGLWLAGGAAGLAAAATLFFTVWGWETGRIEGSPNNANASAVVMEEASAA EEGKEEAAVEQAVVNGMAENSASETVAPADVAPAEASASMPSENEAAVVVENGIVKFYFA SGKSDLAAGAEDALKDVLAGVKAGKKAVVSGFHDKTGNQALNEELSKQRAFAVKNALMGL GVAENQIELRKPSDSEGSGSKAEARRVEVVLE >gi|289656347|gb|ADEA01000020.1| GENE 116 119574 - 120485 1704 303 aa, chain + ## HITS:1 COG:NMA0521 KEGG:ns NR:ns ## COG: NMA0521 COG0752 # Protein_GI_number: 15793519 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase, alpha subunit # Organism: Neisseria meningitidis Z2491 # 1 300 1 300 301 614 98.0 1e-176 MLTFQQIIFKLQTFWADKGCTVIQPFDMEVGAGTSHPATCLRALGPEPWFAAYVQPSRRP KDGRYGDNPNRLQHYYQFQVALKPAPANIQDLYLDSLRELGIDPKVHDIRFVEDDWENPT LGAWGLGWEVWLNGMEVTQFTYFQQVGGIDCTPVLGEITYGIERLAMYLQGVENVYDLVW AKTLDGNTVTYGDVYHQNEVEQSTYNFEYSDADWLLRQFNDYEAQAKRLLAEENASLALP AYELVLKAGHTFNLLDARGAISVTERATYIGRIRALSRTVAQKYVESREKLGFPLIKDKA QAA >gi|289656347|gb|ADEA01000020.1| GENE 117 120618 - 121343 700 241 aa, chain - ## HITS:1 COG:NMA0528 KEGG:ns NR:ns ## COG: NMA0528 COG1385 # Protein_GI_number: 15793525 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 240 1 240 241 354 72.0 1e-97 MPRFYLSEVLSAGRAVSLPDNVVRHLHVLRLKPDEEIVLFNGDGKAYPARLGVLEKRRAT AEILREEEADNESPLNITLVQAVSSGERMDFTLQKSVELGVGEIRPVLSERCVVRLDGER AAKRVARWQEIVVSACEQSGRNTVPQVLPLVSYQEALRQMPSEKTKLLMSVRNAQKLNRI TPSSDGLIFMVGPEGGWTESEEQQAFGAGFQAVTLGPRVLRTETASLAAIAAMQTLWGDF V >gi|289656347|gb|ADEA01000020.1| GENE 118 121526 - 122215 949 229 aa, chain + ## HITS:1 COG:NMA0529 KEGG:ns NR:ns ## COG: NMA0529 COG0483 # Protein_GI_number: 15793526 # Func_class: G Carbohydrate transport and metabolism # Function: Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family # Organism: Neisseria meningitidis Z2491 # 1 229 34 264 264 404 87.0 1e-113 MLSEADLAAQTAFAAALPLLIGCPMLGEEMTAQQQADLWHNHSDGLWIVDPIDGTNNFIN GLPHFAVSVAYVRHGRAQLGVIYNPVSGECFYAERGRGAFLNGTPLPLRLVGKKLNEAIA GVEIKYLRSGKLSSRLNTLAPFGTIRSMGSSTLDWCYLACGRYDVYVHGGQKLWDYAAGA LIFEEAGGCLSTLEGDDFWSGEHVFKRSVVAALQPDLFEKWLKWIRENQ >gi|289656347|gb|ADEA01000020.1| GENE 119 122463 - 122831 335 122 aa, chain - ## HITS:1 COG:PM1617 KEGG:ns NR:ns ## COG: PM1617 COG3012 # Protein_GI_number: 15603482 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pasteurella multocida # 1 118 38 154 157 144 55.0 3e-35 MRSRYSAYVLQKTAYLVETTVPSQRHLLDVEGMAEWGRSAQWLGLDVSAHIPKIGKHHAQ VEFAAHFRQNGETYCHRERSVFVNIGGRWYFIDPTVPLPAMKQACLCGSGKKFKACCGRF FR >gi|289656347|gb|ADEA01000020.1| GENE 120 123105 - 123959 1107 284 aa, chain + ## HITS:1 COG:NMB0208 KEGG:ns NR:ns ## COG: NMB0208 COG2878 # Protein_GI_number: 15676135 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfB # Organism: Neisseria meningitidis MC58 # 1 283 1 279 279 303 68.0 3e-82 MTATVQRLNRLLPQTQCRECGYDGCLPYAQALAEGSAPVNLCAPGGEAVMADIAGLLGKA CIAPAKIQHHALAWIDETACIGCTACIRACPVDAIMGARKLMHTVIADECTGCGLCVAPC PVDCIHMQPVKADYLPQARHLSDNGAARFAAAEHAKTRYERHQARKQREAAERNAMLAGR EAAAKARIQAQAQAASTAAKPAFNPADLIAKAMAKAQAQQTQLITPQNRDDFKARQIEEA KQRAAYRRAQRDMKYGSAAEKAEALEFLRRHKAEQEAKEAAAAK >gi|289656347|gb|ADEA01000020.1| GENE 121 124335 - 125366 1650 343 aa, chain + ## HITS:1 COG:NMB0207 KEGG:ns NR:ns ## COG: NMB0207 COG0057 # Protein_GI_number: 15676134 # Func_class: G Carbohydrate transport and metabolism # Function: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase # Organism: Neisseria meningitidis MC58 # 1 343 1 343 343 607 86.0 1e-173 MGIKVAINGYGRIGRQVLRAIYDYKLQDQFEVVAVNASGSLETNAHLTKFDTVHGRFDAD ISHDATHLIINGRKIPFFSTRNPAELPWRDLDVDLVMECTGSFTSKSKANAHLESGAKKV LISAPCEADVDATIVYGVNDDIITDDMTVISNASCTTNCLAPIAKVLHENVGIVKGAMTT IHALTNDQTVTDVRHTDLRRARSGVENMIPTKTGAAKAVGLVLPELKGKLDGLAIRVPTV NVSVVDLSFQAARDTTVEEINALMQAASEEGRLKGILCCNTLPLVSMDFNHTTQASIFDA TLTKVVDGNMVKVFAWYDNEWGFSCQMLNTARRMFGFEVRPFK >gi|289656347|gb|ADEA01000020.1| GENE 122 125431 - 126567 1610 378 aa, chain - ## HITS:1 COG:NMA0209 KEGG:ns NR:ns ## COG: NMA0209 COG0484 # Protein_GI_number: 15793233 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone with C-terminal Zn finger domain # Organism: Neisseria meningitidis Z2491 # 1 378 1 373 373 559 80.0 1e-159 MINKDFYEILGVARGASDDEIKKAYRKLAMKYHPDRNPGDKEAEDKFKEVQKAYDTLSDK EKRAMYDQYGHAAFEQGMGGGAGGFGGFGGFGGAQGFDFSDIFSQMFGGGAGGGRQQNYQ GADLQVGVEITLEDAAKGIKKRINIPTYEECSVCHGSGAKPGTSASTCSTCHGSGTVHIR QAIFQMQQTCPTCHGTGKEIKDPCVKCRGEGRTKTSKTVEVNIPAGIDDGQRIRLSGEGE PGTHGAPAGDLYVNVRVKEHKIFERNGLDLHCELPISFAVAALGGEVEVPTLDGKVKLNI PKETQTGRRMRVKGKGIKSLRSNSMGDLYCHVLVETPVNLTDRQKELLEEFEKISTGLDR SQTPRKKSFWDKVGDLFD >gi|289656347|gb|ADEA01000020.1| GENE 123 126784 - 129420 3846 878 aa, chain + ## HITS:1 COG:NMB1897 KEGG:ns NR:ns ## COG: NMB1897 COG0495 # Protein_GI_number: 15677729 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Leucyl-tRNA synthetase # Organism: Neisseria meningitidis MC58 # 3 878 1 876 876 1735 97.0 0 MTMQEHYQPAAIEPAAQKKWDDARIFNVSEDASKPKYYCLSMFPYPSGKLHMGHVRNYTI GDVLSRFKLLNGFNVMQPMGWDAFGMPAENAAMKNNVAPAAWTYDNIEYMKTQLKSLGFA IDWEREVATCKPEYYRWEQWLFTKLFEKGIVYRKNGTVNWDPVDQTVLANEQVIDGRGWR SGALIEKREIPMYYFKITDYAEELLKDLDKLEHWPEQVKTMQRNWIGKSRGMTVRFAVSD DSKQGLEGDYAKFLQVYTTRPDTLMGATYVAVAAEHPLATAAAADKPELQAFIAECKAGS VAEADMATMEKKGVPTGRYVVNPLNGDKLEVWIANYVLWGYGDGAVMAVPAHDERDFEFA TKYNLPKKQVIAVGDNAFDENQWQEWYGDKENGVLVNSGDLDGMNFQTAFDAIAAKLQSQ EAGEPKTQYRLRDWGISRQRYWGCPIPIVHCEKCGDVPVPADQLPVVLPENVVPDGMGSP LAKMPEFYETTCPCCGGAAKRETDTMDTFMESSWYFFRYMSPKFAEGMVSAEAAKYWGAV DQYIGGIEHAILHLLYARFFTKLMRDEGLVSVDEPFERLLTQGMVVCETYYRENANGSKD WINPADVELTFDDKGRPVSAVLKADGLPVVISGTEKMSKSKNNGVDPQELINAYGADTAR LFMMFAAPPEQSLEWSDSGVEGAHRFLRRLWRTVYEYLKQGGAVKAFAGSQDGLSKELKD LRHKLHATTAKVSDDYGRRQQFNTAIAAVMELLNQYDKTDTGSEQGRAVAQEVLETAVRL LWPIVPHICETLWSELNGAKLWEAGWPTVDEAALVKSEIEVMVQVNGKLRGKITVAADAS KADLEAAALATEGAVKFMEGKPAKKIIVVPGRLVNIVV >gi|289656347|gb|ADEA01000020.1| GENE 124 129885 - 130346 -58 153 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298369586|ref|ZP_06980903.1| ## NR: gi|298369586|ref|ZP_06980903.1| hypothetical protein HMPREF9016_02027 [Neisseria sp. oral taxon 014 str. F0314] # 38 153 1 116 116 202 99.0 4e-51 MHIRFDYHTEKQSHVRRKIGKRPQYNDNRPSERDAHLLACRLPFKIKQAEDEPDKAIKYY TAAEFPMRYHPEGGHTHFRQPKGRPHKEAAAKTTADKTECAVLNVRCILQGKPKGTHSFL PARSPQHGRENHDRRKRLPTDKQNTAAGLHIEI >gi|289656347|gb|ADEA01000020.1| GENE 125 130513 - 131149 580 212 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298369587|ref|ZP_06980904.1| ## NR: gi|298369587|ref|ZP_06980904.1| extensin [Neisseria sp. oral taxon 014 str. F0314] # 1 172 1 172 213 209 100.0 1e-52 MSKHITLSVRESDSGLLSPSVSQNRHHHSDQGREQLAAQAVDAALQPQNGEAEKLPENAV FLSADDALDIGLTPDYAALAASAGQYRPIAANGFTPLSEYSEDEFAIDTDQESAGLEPVR ASEIISRTSQSSSFAPKLLGGLAGTGLLGGLAAAGGGGGGGGKGEEKPAEKNTAEKTAAE KAAAEKAAAEKAAAEKAAAEKAAAEKAAAEKS Prediction of potential genes in microbial genomes Time: Thu May 26 13:31:52 2011 Seq name: gi|289656346|gb|ADEA01000021.1| Neisseria sp. oral taxon 014 str. F0314 cont1.21, whole genome shotgun sequence Length of sequence - 105490 bp Number of predicted genes - 94, with homology - 91 Number of transcription units - 57, operones - 22 average op.length - 2.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 2302 - 2343 10.0 2 2 Tu 1 . - CDS 2381 - 3400 1437 ## NMO_1941 hypothetical protein - Prom 3502 - 3561 3.8 - Term 3509 - 3551 8.5 3 3 Tu 1 . - CDS 3675 - 5462 2561 ## COG1960 Acyl-CoA dehydrogenases - Prom 5511 - 5570 3.1 - Term 5672 - 5724 -0.2 4 4 Tu 1 . - CDS 5792 - 7369 2517 ## COG0225 Peptide methionine sulfoxide reductase - Prom 7421 - 7480 5.0 - Term 7445 - 7492 14.3 5 5 Tu 1 . - CDS 7511 - 9100 2802 ## COG1620 L-lactate permease - Prom 9296 - 9355 4.6 - Term 9473 - 9528 19.2 6 6 Tu 1 . - CDS 9554 - 12256 4274 ## COG2352 Phosphoenolpyruvate carboxylase - Prom 12353 - 12412 5.3 + Prom 12413 - 12472 5.5 7 7 Op 1 . + CDS 12595 - 13095 965 ## COG0315 Molybdenum cofactor biosynthesis enzyme + Term 13113 - 13156 9.8 + Prom 13155 - 13214 2.4 8 7 Op 2 . + CDS 13234 - 13983 1182 ## COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 + Term 14000 - 14051 13.4 9 8 Op 1 . - CDS 14056 - 14670 843 ## COG0352 Thiamine monophosphate synthase - Prom 14691 - 14750 2.6 - Term 14699 - 14727 0.5 10 8 Op 2 . - CDS 14752 - 15129 716 ## COG0789 Predicted transcriptional regulators - Prom 15192 - 15251 3.8 + Prom 15102 - 15161 4.6 11 9 Op 1 . + CDS 15199 - 15576 666 ## COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit + Prom 15595 - 15654 4.2 12 9 Op 2 . + CDS 15678 - 18362 3792 ## COG1391 Glutamine synthetase adenylyltransferase + Term 18378 - 18431 15.5 - Term 18369 - 18416 15.7 13 10 Op 1 . - CDS 18515 - 18700 150 ## - Prom 18722 - 18781 3.1 14 10 Op 2 . - CDS 18833 - 19078 258 ## gi|298369600|ref|ZP_06980917.1| ammonium transporter - Prom 19199 - 19258 6.8 15 11 Tu 1 . - CDS 19527 - 21038 2571 ## COG0753 Catalase - Prom 21175 - 21234 6.4 + Prom 21316 - 21375 7.0 16 12 Tu 1 . + CDS 21412 - 23619 3308 ## COG0210 Superfamily I DNA and RNA helicases + Prom 24101 - 24160 3.0 17 13 Tu 1 . + CDS 24385 - 24918 570 ## NMB0234 hypothetical protein + Term 24952 - 24999 4.2 18 14 Tu 1 . - CDS 25018 - 26511 872 ## COG3177 Uncharacterized conserved protein - Prom 26548 - 26607 2.5 + Prom 26541 - 26600 3.2 19 15 Tu 1 . + CDS 26627 - 27034 635 ## PsycPRwf_0647 OsmC family protein + Term 27037 - 27099 21.9 + Prom 27046 - 27105 4.2 20 16 Op 1 . + CDS 27188 - 28039 1215 ## COG0668 Small-conductance mechanosensitive channel 21 16 Op 2 . + CDS 28070 - 28936 1510 ## Vapar_0507 hypothetical protein + Term 29085 - 29111 -1.0 22 17 Tu 1 . + CDS 29190 - 31226 3496 ## COG0339 Zn-dependent oligopeptidases + Term 31350 - 31405 -0.4 + Prom 31454 - 31513 6.8 23 18 Op 1 . + CDS 31656 - 32159 430 ## Ssed_2205 hypothetical protein 24 18 Op 2 . + CDS 32223 - 33287 1548 ## COG0628 Predicted permease + Term 33312 - 33363 12.1 - Term 34146 - 34197 9.6 25 19 Tu 1 . - CDS 34230 - 35795 2467 ## COG0659 Sulfate permease and related transporters (MFS superfamily) - Prom 35904 - 35963 1.9 - Term 35990 - 36029 1.3 26 20 Tu 1 . - CDS 36158 - 36832 1164 ## COG0288 Carbonic anhydrase - Prom 37029 - 37088 2.9 + Prom 37098 - 37157 6.1 27 21 Tu 1 . + CDS 37184 - 38425 1975 ## COG0814 Amino acid permeases 28 22 Op 1 . + CDS 38543 - 39013 693 ## Sked_15040 hypothetical protein 29 22 Op 2 1/0.235 + CDS 39041 - 40108 1316 ## COG0438 Glycosyltransferase 30 22 Op 3 4/0.000 + CDS 40200 - 40778 1109 ## COG0241 Histidinol phosphatase and related phosphatases + Prom 40829 - 40888 2.1 31 22 Op 4 3/0.000 + CDS 41111 - 41845 1169 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase 32 22 Op 5 . + CDS 41879 - 42574 967 ## COG1451 Predicted metal-dependent hydrolase + Prom 42618 - 42677 3.9 33 23 Tu 1 . + CDS 42700 - 43689 1500 ## COG0240 Glycerol-3-phosphate dehydrogenase + Term 43721 - 43771 7.4 + Prom 43741 - 43800 3.6 34 24 Op 1 . + CDS 43828 - 44154 627 ## NGK_2214 hypothetical protein 35 24 Op 2 2/0.059 + CDS 44164 - 44460 603 ## COG3027 Uncharacterized protein conserved in bacteria + Prom 44754 - 44813 6.0 36 25 Op 1 59/0.000 + CDS 44840 - 45271 742 ## PROTEIN SUPPORTED gi|225374042|ref|ZP_03751263.1| hypothetical protein NEISUBOT_02339 37 25 Op 2 . + CDS 45281 - 45673 638 ## PROTEIN SUPPORTED gi|15677878|ref|NP_275046.1| 30S ribosomal protein S9 + Term 45687 - 45729 4.1 + Prom 45697 - 45756 5.0 38 26 Tu 1 . + CDS 45932 - 46180 178 ## COG2261 Predicted membrane protein + Term 46199 - 46236 5.2 39 27 Tu 1 . + CDS 46585 - 46758 96 ## COG0526 Thiol-disulfide isomerase and thioredoxins + Prom 46896 - 46955 5.7 40 28 Op 1 2/0.059 + CDS 47072 - 47509 449 ## COG1846 Transcriptional regulators 41 28 Op 2 2/0.059 + CDS 47527 - 48027 414 ## COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family + Prom 48179 - 48238 6.9 42 29 Tu 1 . + CDS 48331 - 49029 349 ## COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) + Term 49083 - 49132 8.7 - Term 49122 - 49156 3.8 43 30 Tu 1 . - CDS 49171 - 50379 919 ## COG0206 Cell division GTPase - Prom 50429 - 50488 7.9 - Term 50600 - 50658 6.2 44 31 Op 1 25/0.000 - CDS 50680 - 51924 1082 ## COG0849 Actin-like ATPase involved in cell division 45 31 Op 2 18/0.000 - CDS 51939 - 52682 629 ## COG1589 Cell division septal protein 46 31 Op 3 11/0.000 - CDS 52672 - 53583 776 ## COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes - Prom 53660 - 53719 3.9 - Term 53720 - 53764 -0.6 47 31 Op 4 26/0.000 - CDS 53776 - 55185 1869 ## COG0773 UDP-N-acetylmuramate-alanine ligase - Prom 55220 - 55279 4.6 48 31 Op 5 31/0.000 - CDS 55330 - 56400 1305 ## COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase 49 31 Op 6 25/0.000 - CDS 56404 - 57564 1541 ## COG0772 Bacterial cell division membrane protein 50 31 Op 7 28/0.000 - CDS 57605 - 58942 1751 ## COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase 51 31 Op 8 . - CDS 59003 - 60085 1731 ## COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase - Term 60277 - 60307 -1.0 52 32 Op 1 . - CDS 60443 - 60631 241 ## NMB0417 hypothetical protein 53 32 Op 2 . - CDS 60634 - 62001 1466 ## COG0770 UDP-N-acetylmuramyl pentapeptide synthase 54 32 Op 3 . - CDS 62033 - 63046 791 ## RoseRS_2454 hypothetical protein 55 32 Op 4 . - CDS 63108 - 63629 577 ## COG0739 Membrane proteins related to metalloendopeptidases - Prom 63747 - 63806 3.7 - Term 63751 - 63803 13.1 56 33 Op 1 26/0.000 - CDS 63818 - 65296 1816 ## COG0769 UDP-N-acetylmuramyl tripeptide synthase 57 33 Op 2 2/0.059 - CDS 65323 - 67068 1802 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 58 34 Op 1 2/0.059 - CDS 67188 - 67451 280 ## COG3117 Uncharacterized protein conserved in bacteria 59 34 Op 2 29/0.000 - CDS 67453 - 68424 457 ## COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis 60 34 Op 3 . - CDS 68421 - 68876 637 ## COG2001 Uncharacterized protein conserved in bacteria + Prom 69141 - 69200 5.9 61 35 Tu 1 . + CDS 69229 - 70380 863 ## COG1565 Uncharacterized conserved protein + TRNA 70549 - 70625 87.8 # Met CAT 0 0 + TRNA 70629 - 70704 90.1 # Ala GGC 0 0 - Term 70704 - 70737 4.7 62 36 Tu 1 . - CDS 70843 - 71664 759 ## COG2819 Predicted hydrolase of the alpha/beta superfamily - Prom 71733 - 71792 1.7 - Term 71807 - 71851 6.1 63 37 Tu 1 . - CDS 71940 - 74042 2901 ## COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid + Prom 74149 - 74208 6.5 64 38 Tu 1 . + CDS 74415 - 75323 1173 ## COG2207 AraC-type DNA-binding domain-containing proteins + Term 75330 - 75375 12.9 - Term 75313 - 75367 19.0 65 39 Tu 1 . - CDS 75379 - 78813 4888 ## COG0587 DNA polymerase III, alpha subunit - Prom 78837 - 78896 4.8 + Prom 78897 - 78956 4.2 66 40 Op 1 . + CDS 78980 - 79213 488 ## COG2501 Uncharacterized conserved protein 67 40 Op 2 . + CDS 79191 - 79409 282 ## NMA0634 hypothetical protein + Prom 79415 - 79474 5.9 68 41 Tu 1 . + CDS 79702 - 80538 1304 ## COG0613 Predicted metal-dependent phosphoesterases (PHP family) + Term 80557 - 80599 8.1 - Term 80535 - 80594 15.5 69 42 Op 1 . - CDS 80616 - 81122 934 ## COG1854 LuxS protein involved in autoinducer AI2 synthesis 70 42 Op 2 . - CDS 81177 - 81500 582 ## COG1965 Protein implicated in iron transport, frataxin homolog - Prom 81527 - 81586 3.2 + Prom 81476 - 81535 2.4 71 43 Op 1 . + CDS 81571 - 81753 234 ## NMO_0186 putative lipoprotein 72 43 Op 2 . + CDS 81750 - 82970 1783 ## COG0019 Diaminopimelate decarboxylase + Term 82993 - 83034 9.6 - Term 82970 - 83031 14.6 73 44 Op 1 2/0.059 - CDS 83040 - 83267 284 ## COG2900 Uncharacterized protein conserved in bacteria 74 44 Op 2 . - CDS 83268 - 84638 2280 ## COG2056 Predicted permease - Prom 84709 - 84768 4.8 + Prom 84811 - 84870 6.4 75 45 Op 1 . + CDS 85030 - 85257 184 ## gi|298369662|ref|ZP_06980979.1| hypothetical protein HMPREF9016_02103 76 45 Op 2 . + CDS 85275 - 85460 336 ## gi|298369663|ref|ZP_06980980.1| hypothetical protein HMPREF9016_02104 + Term 85497 - 85531 6.0 - Term 85711 - 85770 18.2 77 46 Tu 1 . - CDS 85794 - 86183 693 ## gi|298369664|ref|ZP_06980981.1| lipoprotein PG3 - Prom 86273 - 86332 2.0 - Term 86365 - 86405 10.6 78 47 Op 1 . - CDS 86421 - 87245 234 ## PROTEIN SUPPORTED gi|169796031|ref|YP_001713824.1| putative adenine-specific methylase 79 47 Op 2 23/0.000 - CDS 87322 - 88206 1045 ## COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 80 47 Op 3 . - CDS 88223 - 89131 990 ## COG0714 MoxR-like ATPases - Prom 89283 - 89342 4.5 + Prom 89233 - 89292 6.8 81 48 Tu 1 . + CDS 89314 - 90714 2011 ## COG0790 FOG: TPR repeat, SEL1 subfamily + Term 90761 - 90803 12.0 - Term 90804 - 90846 1.6 82 49 Tu 1 . - CDS 90995 - 91117 134 ## - Prom 91137 - 91196 1.7 - Term 91244 - 91290 13.7 83 50 Tu 1 . - CDS 91311 - 92198 1041 ## COG0287 Prephenate dehydrogenase - Prom 92261 - 92320 4.2 - Term 92210 - 92268 7.1 84 51 Tu 1 . - CDS 92340 - 93143 1047 ## COG3298 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB - Prom 93190 - 93249 4.4 - Term 93853 - 93925 12.1 85 52 Tu 1 . - CDS 93934 - 94803 1187 ## COG1560 Lauroyl/myristoyl acyltransferase - Prom 94824 - 94883 4.6 86 53 Op 1 . - CDS 94927 - 95475 827 ## COG0817 Holliday junction resolvasome, endonuclease subunit - Term 95483 - 95519 -0.4 87 53 Op 2 . - CDS 95523 - 96362 1168 ## COG0388 Predicted amidohydrolase - Prom 96529 - 96588 1.9 + Prom 96379 - 96438 3.6 88 54 Tu 1 . + CDS 96463 - 96777 470 ## COG3203 Outer membrane protein (porin) + Term 96799 - 96837 4.3 - Term 96793 - 96818 -0.5 89 55 Tu 1 . - CDS 96853 - 97923 1422 ## COG0859 ADP-heptose:LPS heptosyltransferase - Prom 97952 - 98011 3.4 90 56 Tu 1 . - CDS 98415 - 99707 1897 ## COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase + Prom 99766 - 99825 5.1 91 57 Op 1 . + CDS 99870 - 100094 160 ## 92 57 Op 2 5/0.000 + CDS 100091 - 103360 3107 ## COG3513 Uncharacterized protein conserved in bacteria + Term 103370 - 103410 8.2 93 57 Op 3 4/0.000 + CDS 103432 - 104346 991 ## COG1518 Uncharacterized protein predicted to be involved in DNA repair 94 57 Op 4 . + CDS 104339 - 104665 394 ## COG3512 Uncharacterized protein conserved in bacteria Predicted protein(s) >gi|289656346|gb|ADEA01000021.1| GENE 1 355 - 2286 2889 643 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298369588|ref|ZP_06980905.1| ## NR: gi|298369588|ref|ZP_06980905.1| glycoprotein X [Neisseria sp. oral taxon 014 str. F0314] # 1 643 1 643 643 1096 100.0 0 MHETRGKYIDASDFGTDPTGKTDSLPAIKAALAAAHAEGASLYLHGKLYISDQIKIDQSL SNVKGLFGDGMGKTEISFDKAQTGVFNSNTNEDDIRPFAGILVDNVNGVTIADLSVKYTN PDFYRKGSSYFGKVNGIMVNDSDHTLIDGVEVTGVNRAGVFFGSTATLTKDPLGSGATYK ARLIRGEIDENYGTLPLGEHNSVVNSYLHHNRVAGVLFAYQKNFTADHNRLDWNGHEADG GTGYGVAAMAGSYNYGITFTNNSTDHNYRKGLDVHDGNDIVISNNTLNGDRLYGIGVYNR QFTMDNVKITNNVITQDAKFRLPVDDDLPANYHSYSGIQLQTNTQYKNLHTENNASYVIN GNTIKGLTLYTYDRTDRSALQTYGIEVRNHEQTIDYTIDISNNTIEGNSSRYLIAVINST QNPATKDKGPGSGDINITGNNLSIEEIPNGTMPIYVEEKHNNGSLRGDVDVSGNHIAIAK SNGTVEAIQMLGNAETYTVSHNKFELHGMLDKSIVSIHGRGDSASSVTISDNDLVTDRTD ALYKGWIETKNVSYISIDNTHNNDAVAVSSNMSTEDVAAFTAKHEAADLAKEWAADTSLD LSSLLSADGSAQAGIIDVAAGAEHTAYAMTDTFTVDTSDTHVL >gi|289656346|gb|ADEA01000021.1| GENE 2 2381 - 3400 1437 339 aa, chain - ## HITS:1 COG:no KEGG:NMO_1941 NR:ns ## KEGG: NMO_1941 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 18 339 17 338 338 287 48.0 5e-76 MYKKLLALSLTAAALCACSKDSDQQPLACGDTSVEQSVRSNIQEIIKQQAREFARKDSRQ FVDADKLIAAGSQLEISLENAEETTEDNKKICRADLKVQIPSEIAATAENNSPLIYGDLG LNQFIERKIMGSNLSYNGGTFSTALSYTPNQNKEVTFEDNTLNTTAQIISSALLPYGVKS IVMIDGKAVSKEDALKMNRGGAFGEPPELKPEDILENNAASQEAGLSSLLEDTGSDAELL SPKTTEQETPSPAFSDLERAREQNRKADSEINRIWGGMDKTIQQGMLAEQRSWIQSKKQN CAQAAAEADNPAQAEYLRLQCDTRMTRERVQYLRGYTIN >gi|289656346|gb|ADEA01000021.1| GENE 3 3675 - 5462 2561 595 aa, chain - ## HITS:1 COG:RSc0925 KEGG:ns NR:ns ## COG: RSc0925 COG1960 # Protein_GI_number: 17545644 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Ralstonia solanacearum # 1 575 1 579 594 441 45.0 1e-123 MSYTAPVNELRFGIRVHGRLDEVLQLPHAEGLDAETVDAVLDEAARFASEQWADTNRTGD LYGAGFSDDLITTHPDLAHAYDDFCEAGWAGLRAPTEFGGQGLPAVVSAACEEMWCAANL ALSLMPMLTLGAVDALFKHGSEEQKQTYLPKMCSGEWAGTMNLSEPQAGSDLNHIATRAV PKENGAYALSGQKIFITWGDQEMTENIVHLVLARLPDAAPGVQGVSMFIVPKYLVNADGS LGGRNGVRAIGIEHKLGIHASPTCTMEFDNAEGYLVGRAGKGLAYMFTMMKTARLNVGIE GHAVAERAYQNALAYAKERVQGRDEADGSDDVAIIRHPDVRRMLLIQKATLAAQRALYLR AAALTDFAAACPDNVLRKEAERELDFLIPIVKAWLTDNGVVLTNLAVQIYGGAGYVEESG VAQYLRDVRITPIYEGTNGIQAADLAGRKTTGKNGALPLKLLAEGKELADKLAAVEPAAA QQLAQAIETAEQSIARMVGYADRPALAAAASNAYLQQMGLTLGAIGLARAYLAAEAARTE DADGFGSGFYAAQQHNARVYCAHVLPQVYACAAQIENAQALLDVPLGCFDGSEAV >gi|289656346|gb|ADEA01000021.1| GENE 4 5792 - 7369 2517 525 aa, chain - ## HITS:1 COG:NMB0044_2 KEGG:ns NR:ns ## COG: NMB0044_2 COG0225 # Protein_GI_number: 15675984 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptide methionine sulfoxide reductase # Organism: Neisseria meningitidis MC58 # 200 380 1 181 181 358 96.0 2e-98 MKMGKTSVWKIALLLGAAVAGTAFLLPQAAPVQAAPVPQMLSRLKDSHGRPAASLLVKNK PTLIKFWASWCPLCLSELGQTEKWAQDKRFGSANLITVASPGFLHEKKDGDFQKWYAGLN YPKLPVVTDNGGTIAQSLNISVYPSWALIGKDGDVQRIVKGSINEVQALALIRDPNADLG RLKNAFYKPDTQKKDSKIMNTRTIYLAGGCFWGLEAYFQRIDGVVDAVSGYANGKTKNPS YEDVSYRDTGHAETVKVTYDADKLSLDDILQYYFRVVDPTSLNKQGNDSGTQYRSGVYYT DPAEKAVIAAALKREQQKYKQPLVVENEPLKNFYDAEEYHQDYLIKNPNGYCHIDIRKAD EPLPGKTKAAPQGKGFDAATYKKPSDAELKRILTEEQYQVTQKSATEYAFSHEYDHLFKP GIYVDVVSGEPLFSSADKFDSGCGWPSFTRPINAAAVTEHDDFSYNMRRTEVRSHAADSH LGHVFPDGPKDKGGLRYCINGASLKFIPLEQMDAAGYGALKGKVK >gi|289656346|gb|ADEA01000021.1| GENE 5 7511 - 9100 2802 529 aa, chain - ## HITS:1 COG:NMA0722 KEGG:ns NR:ns ## COG: NMA0722 COG1620 # Protein_GI_number: 15793699 # Func_class: C Energy production and conversion # Function: L-lactate permease # Organism: Neisseria meningitidis Z2491 # 2 529 1 528 528 882 92.0 0 MMPLFLSIFPIILLIWLMVKKNSMPSYIALPITAALIYAIKLFYFDDDAMLLNATAASGL VSTLTPITVIFGAIMFNRMMETTGCIDVIRKWLATISPNPVAQLMIIGWAFAFMIEGASG FGTPAAIAAPILMSLGFNPLKVAIFTLVMNSVPVSFGAVGTPTWFGFAPLNLSAEDIMAI GRQTGIMHFAAGFIIPVIGLSFIVPWAEIRKNLGFVGISVFSCTIPYVALAMVNEEFPSL VAGAVGLLVSVFAANHGWGLSKDHAKDPNAEKVPFAQVAKALAPLGMLIGMLVVTRIKQL GIKGLLTSKTEWFSFQLPFDLSKISVSDSLTITFGNIFGQGVSESYQTLYVPAWIPFVFT VWICIALYKTKFKDAWEFYAATFHQTKKPLLALMGALIMVKLMMVGGDNSMVKIIGKEFA AMAGEHWIYFSPYLGAIGAFFSGSNTVSNLTFGPIQQQIALDTGLSVTLILALQSVGGAM GNMVCINNIIAVCTVLDVHNAEGAIIKKTVIPMAIYGVIAVAVALVLFL >gi|289656346|gb|ADEA01000021.1| GENE 6 9554 - 12256 4274 900 aa, chain - ## HITS:1 COG:NMA0374 KEGG:ns NR:ns ## COG: NMA0374 COG2352 # Protein_GI_number: 15793382 # Func_class: C Energy production and conversion # Function: Phosphoenolpyruvate carboxylase # Organism: Neisseria meningitidis Z2491 # 1 900 18 917 917 1537 86.0 0 MQLHILNNPKDAPLAADAEFLKQSLFNLLHEEASPQVVETVKLLASSDDSSAVIEKVLPE LDEQQTHDLTLACGLFAQILNIAEDVHHERRRQIHEDAGHNAAEGSLSETVRKLKANQIE GRAVQKQLDGTSITAVLTAHPTEVQRQTVLGFNRRIHSLLSMRERCTNAEALTDLRREID TVLLSLWQTSETRHHKLSVHDEINNGVSIFPMSFFEALPKLYRGMEREFQTAYPDVVIPD ILKIGGWIGGDRDGNPFVSAETLRFAFRRHADAVFRFYRGELDKLYRELPLSVRRVKVND DVMALSDESPDEEIARTEEPYRRAIAYIMARVMGKARSLGLGMGCKFGFMLPYASAQEFS DDLHKLQRSLCDNGSALLAQGRLANIIRTASVCGFHMMPLDLRQHAEKHADVVAELFKHA GLEDYGSLSETEKQNVLLRELKHQRPLSSPFITYSEHTRREMAIFNEARKIKDEFGENAI TQSIISNCEQPSDLLALALLLKESGLLVVENGKPQSRINIVPLFETIEALENACPVMETM FSNEWYRDLLQSRDNIQEIMLGYSDSNKDGGYVTSSWCLYQAELGLVELFKKYDVRMRLF HGRGGSVGRGGGPSYQAILAQPAGSVAGQIRITEQGEVITAKYADPGNAQRNLETLVAAT LEASLLPDRKDPDGRLMQELSDSSFKFYRALITHEDFIDYFLQTSPIREIASLNLGSRPA SRKTLARIQDLRAIPWVFSWMQNRLMLPAWYGFGSAVEELCRRNPDDMSLLQQHAQDNPF FRAMLSNMEQVMAKTDITLAESYAGLSESPEKAGIIFGMIKEEYLRSRKALLDILKTAGL LSGNRSLARSLALRIPYLNALNGLQVAMLKRLRKDPNNPHLLLMVHLTINGVAQGLRNTG >gi|289656346|gb|ADEA01000021.1| GENE 7 12595 - 13095 965 166 aa, chain + ## HITS:1 COG:RSc0560 KEGG:ns NR:ns ## COG: RSc0560 COG0315 # Protein_GI_number: 17545279 # Func_class: H Coenzyme transport and metabolism # Function: Molybdenum cofactor biosynthesis enzyme # Organism: Ralstonia solanacearum # 1 156 1 156 158 167 57.0 9e-42 MFDLTHLNENGDAHMVDISGKASTERTAIASGVINMSLKAIGILADNTAEKGDVLGTARI AAIQAAKQTGFLIPLCHPIALNHIRVDFDIDKDLARVKATVTASTEGQTGVEMEALMGVN IALLTIYDMMKAVDKTMIISQVHLEEKTGGKSGNFIFTDDYENIDF >gi|289656346|gb|ADEA01000021.1| GENE 8 13234 - 13983 1182 249 aa, chain + ## HITS:1 COG:NMB2062 KEGG:ns NR:ns ## COG: NMB2062 COG0476 # Protein_GI_number: 15677884 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 # Organism: Neisseria meningitidis MC58 # 2 249 9 256 256 343 69.0 3e-94 MNDHQLLRYSRHILLDEIGIEGQEKLLGAHALVVGCGGLGAAALPYLAASGIGRLTIADP DAIDDTNLQRQITFTEADIGRSKALVMEGRLKNINSQAGITALPEKLTEARLTELMRATD IVLDCCDNFPTRQAVNRAAVATRTPLVSGAAVRFDGQIAVYRPDLPDSPCYACLFDGDTA DDGACALFGVFSPLVGIIGATQAAEALKVLAGIGTPAHGKLMTYDALAGEWHTFRLERRP ECRVCGGRR >gi|289656346|gb|ADEA01000021.1| GENE 9 14056 - 14670 843 204 aa, chain - ## HITS:1 COG:NMA0363 KEGG:ns NR:ns ## COG: NMA0363 COG0352 # Protein_GI_number: 15793371 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate synthase # Organism: Neisseria meningitidis Z2491 # 1 203 1 203 205 308 81.0 4e-84 MRFPPLKSPLKFYAVVPTAEWVERMVRAGADTVQLRCKTLHGNELKREIERCVAACRGSR SQLFINDHWREAVAAGAYGVHLGQEDMDTADFAAIAAAGLRLGLSTHSLEEMDRALALHP SYVASGAVFPTATKDMPTAPQGLEQLRGQVVRAGGTPVVAIGGITLDNAADVLATGVASL AVVSAVTKAENPEAAVKSFQALWK >gi|289656346|gb|ADEA01000021.1| GENE 10 14752 - 15129 716 125 aa, chain - ## HITS:1 COG:lin0806 KEGG:ns NR:ns ## COG: lin0806 COG0789 # Protein_GI_number: 16799880 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Listeria innocua # 9 124 5 120 123 103 43.0 1e-22 MQGAGFMYIKEFSAQTGLSADTLRYYEKEGLLLPERDGNGYRVYGARDAEWTGFILRLKE MGVPLARIKEYARLRHLGESTIPERFAILQAHKETLAAQQRQLAEHQEFLERKLDVYRKA MAERG >gi|289656346|gb|ADEA01000021.1| GENE 11 15199 - 15576 666 125 aa, chain + ## HITS:1 COG:L35675 KEGG:ns NR:ns ## COG: L35675 COG0599 # Protein_GI_number: 15673958 # Func_class: S Function unknown # Function: Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit # Organism: Lactococcus lactis # 11 124 7 120 122 133 53.0 8e-32 MLNDEKLLQRGMQTLNDIDGEQGAKVMQALADIAPDLGRYIIGFGFGEIYNRPHLDNQRR ELVTLAALAAQGGCEKQLAVHIHAALNVGLSREEIVETFIHCVPYLGFPKALNAVFAAKE VFAEG >gi|289656346|gb|ADEA01000021.1| GENE 12 15678 - 18362 3792 894 aa, chain + ## HITS:1 COG:NMA0035 KEGG:ns NR:ns ## COG: NMA0035 COG1391 # Protein_GI_number: 15793067 # Func_class: O Posttranslational modification, protein turnover, chaperones; T Signal transduction mechanisms # Function: Glutamine synthetase adenylyltransferase # Organism: Neisseria meningitidis Z2491 # 2 890 4 892 896 1686 95.0 0 MNRLDTARRHSLFLARQLDNCKLKPEIFLPMLDKVLTEADFQAFADWDKIRAEENEEELA RQLRELRRYVVSQIIVRDINRISDLHEVTRTITLFADFAVNTALDFAYAYYRDMYGTPIG RYTKSPQHLSVVAMGKAGGYELNVSSDIDLIFVYPESGDTDGRRERGNQEFFTKVGQKLI ALLNDITADGQVFRVDMRLRPDGDSGALVLSETALEQYLITQGREWERYAWCKGRVVTPY PNDIKSLVRPFVFRKYLDYSAYEAMRNLHRQIRSEVSKKGMADNIKLGAGGIREVEFIAQ IFQMIRGGQMRALQLKGTQETLKKLAELGIMPSENVETLLAAYRFLRDVEHRLQYWDDQQ TQTLPASPEQQQLLAESMGFDSYAAFSDDLNAHRNKVNQLFNEILSEPEEQTPDNSEWQW AWQDKPDEEERRGRLKEHGFDAETVAARLDQIRHGHKYRHLSAHAQPRFDAIVPLFVQAA AEQPNPTDTLMRLFDFLENISRRSAYLAFLNEHPQTLAQLAEIMSQSSWVAAYLSKYPIL LDELISAQLLDTAFDWQALAAALSDDLKACGGDTEAQMDTLRRFQHAQVFRLAVQDLAGL WTVESLSDQLSALADTILAAALPCAWADMPKKHRDTPQFAVVGYGKLGGKELGYASDLDL VYLYDDPHPDAGDVYSRLARRLTNWLSAATGAGSLYETDLRLRPNGDAGFLAHSIAAFEK YQRENAWTWEHQSLTRARFICGTPEIQTAFDRIRTEILTAERDQTALAGEIIEMREKMFP THPPIDSNVKYARGGVVDVEFIVQYLILAHARRYPQLLDNYGNIALLNIAADCGLIGKTL AEQSRTAYRFYRQQQHNTKLRDAEKTEVTDELLAHYGNVRKLWREVFGREVKFG >gi|289656346|gb|ADEA01000021.1| GENE 13 18515 - 18700 150 61 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKFNLFILVTAVFVFVFTLIATYFLIFHDFMQSLKVTSLAVLIFVPLNIVLQKVFNKNKF K >gi|289656346|gb|ADEA01000021.1| GENE 14 18833 - 19078 258 81 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298369600|ref|ZP_06980917.1| ## NR: gi|298369600|ref|ZP_06980917.1| ammonium transporter [Neisseria sp. oral taxon 014 str. F0314] # 1 81 1 81 81 91 100.0 2e-17 MQAFYADKTEIRTLSMDELSLVAGGFNWDKVQWGKAVAVGAVTGLSAGVAGLTGGPGVAA AAAAGGFVGGFGSTVVSDGWE >gi|289656346|gb|ADEA01000021.1| GENE 15 19527 - 21038 2571 503 aa, chain - ## HITS:1 COG:NMA0050 KEGG:ns NR:ns ## COG: NMA0050 COG0753 # Protein_GI_number: 15793081 # Func_class: P Inorganic ion transport and metabolism # Function: Catalase # Organism: Neisseria meningitidis Z2491 # 2 503 3 504 504 1005 97.0 0 MTQKCPVTHLTMNNGAPVADNQNSLTAGARGPLLAQDLWLNEKLADFVREVIPERRMHAK GSGAFGTFTVTHDITKYTRAKIFSEVGKQTEVFARFTTVAGERGAADAERDIRGFALKFY TEEGNWDMVGNNTPVFFLRDPRKFPDLNKAVKRDPRTNMRSATNNWDFWTLLPEALHQVT IVMSDRGIPASYRHMHGFGSHTYSFWNEAGERFWVKFHFRSRQGIKNLTNEEAAKIIADD RESHQRDLYEAIERGEFPKWTMYIQVMPEADAEKVPYHPFDLTKVWPKKDYPLIEVGEFE LNRNPENFFADVEQSAFAPSNLVPGIGASPDKMLQARLFNYADAQRYRLGVNFRQIPVNR PRCPVHSNQRDGQGRADGNYGSLPHYEPNSFGQWQQQPDFAEPPLKINGDAAHWNYRQDD DDYFSQPRALFNLMNDVQKQALFDNTAAAMGDAPDFIKYRHIRNCHRCDPAYGEGVAKAL GLTVEDAKAARATDPALGQPGLL >gi|289656346|gb|ADEA01000021.1| GENE 16 21412 - 23619 3308 735 aa, chain + ## HITS:1 COG:NMA0027 KEGG:ns NR:ns ## COG: NMA0027 COG0210 # Protein_GI_number: 15793060 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Neisseria meningitidis Z2491 # 1 735 1 735 735 1434 96.0 0 MFPDQSAPNLLQGLNPEQLSAVTWPPQSALVLAGAGSGKTRVLTTRIAWLLQTGQASVHS IMAVTFTNKAAKEMQTRLGAMIPINVRAMWLGTFHGLCHRFLRLHHRDAGLPSSFQILDS GDQLSLIKRLLKSLNIAEEIIAPRSLQGFINAQKESGLRASVLSAPDPHTSRMIECYAEY DKICQREGVVDFAELMLRSYEMLQSNEILRQHYQNRFNHILVDEFQDTNKLQYAWLKLMA GGNAAIFAVGDDDQSIYRFRGAHVGNMTALMEEFHIDAPVKLEQNYRSVGNILAAANTVI ENNDERLGKNLRTDAEAGDKIRYYSAFTDLEEAQFIVDETKALEREGWDLDEIAVLYRSN AQSRVIEQSLFRSGIPYKIYGGLRFYERQEIKHALAYLRLAVNPDDDNALLRVINFPPRG IGARTVENLQTASNEQGITLWQAACNAGAKAAKVAAFVRLIEALRNQVGQMPLPEIIVGI LKDSGLTEHYRAQKGDNQDRLDNLDELVNAAIEFKPEDSNFEILPDNISDAPAFPILAFL SNAALESGENQAGAGEKAVQLMTVHAAKGLEFNAVFLTGMEEGRFPSEMSLAERGGLEEE RRLMYVAITRARKRLYITMAQQRMLHGQTQFGIVSRFVEEIPPEVLHYLSVKKTAYDSYG SPRQTAAPKDKIIDDYKQPQTYAGFRIGQNVRHAKFGTGVIIDAVDKGESARLTINFGKQ GVKELDTKFAKLEEM >gi|289656346|gb|ADEA01000021.1| GENE 17 24385 - 24918 570 177 aa, chain + ## HITS:1 COG:no KEGG:NMB0234 NR:ns ## KEGG: NMB0234 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis # Pathway: not_defined # 1 177 1 177 179 337 93.0 1e-91 MSQVFKDFDLSSVWESDSWADKNYKEAPFTPEILAAVESELGYKLPQSFIELMAVQNGGI FVKNCFPTTQRNSWADNHVQICEVSGIGFEKEGSLCGEMGQKLWLEEWEYPPIGVYFAND PSGGHALFALDYRECGKDGEPKVVFVEQESDFEIVELTPDFETFIRCLRHEDEFSDE >gi|289656346|gb|ADEA01000021.1| GENE 18 25018 - 26511 872 497 aa, chain - ## HITS:1 COG:NMB1759 KEGG:ns NR:ns ## COG: NMB1759 COG3177 # Protein_GI_number: 15677601 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis MC58 # 91 496 42 451 454 454 57.0 1e-127 MKVTKPPKIEEIFENVLKKVTGPFLPNMEQQLYQLENTSVGAVCPEAEESSSPQTVQIQN LNIPIPEKQKLADVEKLFEECYRLMTTHKATDEKGRYLYWDKIKHKYGKQAEMVWAATKI NRLAGKKKITDFQNHEFSFCVPDTMQSLLHFIDKTCGSHMMLSDGLKLPEADKKTLMMEE SITSAQLEGAVTTRKVAKALLHSKRQKPKDKHEKMIVNNYRLMQKVVELKNEPLSIDLIL SLHRIATEEAIENQAVSGAFRQTDDIHIADYDRNLVYQPPKCSEVPQLMETLCRFANTDH DDIENSLFIHPVVKAVMLHFLTGYIHPFGDGNGRTARALFYWFMLKNGYGLFEYISISRL LNQAPSKYAKSYLYTEYDDLDMTYFIYYQLDVIKRAILDLQAYVERESAKLKNFTAEIAQ FAERHQLNSRQIEILQTAVQDKGRTFKVKDTAAQFDVAENTARADLNRLAALKLLGHFKD GNAIHFVALGDLKERLR >gi|289656346|gb|ADEA01000021.1| GENE 19 26627 - 27034 635 135 aa, chain + ## HITS:1 COG:no KEGG:PsycPRwf_0647 NR:ns ## KEGG: PsycPRwf_0647 # Name: not_defined # Def: OsmC family protein # Organism: Psychrobacter_PRwf-1 # Pathway: not_defined # 5 134 4 133 137 141 54.0 8e-33 MSRIATVRYTGNLHSDLTHLQSGNVISTDAPTDNNGMGEAFSPTDLLAASLGACAMTIMG MKAADLGADLVGARAEVVKEMAANPRRVAKVAVDFYLSKDLDERSRRLLEAAAHTCPVAQ SLSAELVQELRFHYE >gi|289656346|gb|ADEA01000021.1| GENE 20 27188 - 28039 1215 283 aa, chain + ## HITS:1 COG:NMA0055 KEGG:ns NR:ns ## COG: NMA0055 COG0668 # Protein_GI_number: 15793086 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Neisseria meningitidis Z2491 # 1 280 41 320 328 397 78.0 1e-110 MWNTIQQWLHGLPIRAEVIESVLMVAAVLIMRSVLLTTHFRRHPDLNIEDKRRSLVLSRN LTLMLVLLGLAMIWAAQIQTLALSMFAVAAAIVVATKELIMCLSGSILRSVTKQYSVGDY IEVNGLRGRVVDINLLNTLMMQIGPHPLVGQLSGKTLSFPNSLLLSHYVRRDNILGPYVI HTVEIPVPIHLDSDAVIPNLKQVLEPLCAPYVPEISRYLDAVQAEKLFITPAAQPRVTRV PHDDKVYNIIVRYASPVSKRLEIQQAVLDEFLRVQYRLLNPHS >gi|289656346|gb|ADEA01000021.1| GENE 21 28070 - 28936 1510 288 aa, chain + ## HITS:1 COG:no KEGG:Vapar_0507 NR:ns ## KEGG: Vapar_0507 # Name: not_defined # Def: hypothetical protein # Organism: V.paradoxus # Pathway: not_defined # 1 256 1 254 267 251 47.0 2e-65 MLPESALTQMYPVIMTPSHDGKYFHNYVLSLLNIVHTSAQNGWPLQVMMQRGESLITRAR NNCVATFMAHPEWTHLFWIDSDIGFSAEAFYRLLLADKDVVAGIYPLKRENWPAEGVPAG TTQADFERMYTCYTVNTDAKNENGEIVLRVDEEGFMKVNDAPTGFMVIKRGVFEKMMAAY PELNYISDSDYNREDNGLHYRFFDCMVDPESKRYLSEDYTFCRLWQQIGGEVYVDVQSNL THQGAKIYRGAFADSLQTNVAQAVFAPAGTPMSLDLAAPLASNPRGAE >gi|289656346|gb|ADEA01000021.1| GENE 22 29190 - 31226 3496 678 aa, chain + ## HITS:1 COG:NMB0214 KEGG:ns NR:ns ## COG: NMB0214 COG0339 # Protein_GI_number: 15676140 # Func_class: E Amino acid transport and metabolism # Function: Zn-dependent oligopeptidases # Organism: Neisseria meningitidis MC58 # 1 677 1 677 678 1248 92.0 0 MTDNVLLHLGEKPRFDQIQTADIKPALQTAIAEARAQIAEVKAQTHTDWANTVERLTDIT ERVGRIWGVVSHLNSVVDTPELRAVYNELMPEITIFFTGIGQDIELYNRFKTIKNSPEFA TLSPAQQTKLNHNLRDFVLSGAELPPEQQAELAKLQTEGAQLSAKFSQNVLDATDAFALY FDDAAPLAGIPEDSLAMFAAAAQSEGKTGYKIGLQIPHYLAVIQYADNRDLRKQIYRAYV TRASELSDDGKFDNTANIDRTLENALQTAKLLGFKNYAELSLFTKMADSPEQVLTFLHDL ARRAKPYAEKDLAEVKAFARERLNLADPQPWDWSYASEKLREAKYAFSETEVKKYFPVSK VLAGLFAQIKKLYGIGFAEKTVPVWHKDVRYFELEQNGKTIGGVYMDLYAREGKRGGAWM NDYKGRRRFADGTLQLPTAYLVCNFTPPVGGKEARLRHDEILTLFHETGHGLHHLLTQVD ELGVSGINGVEWDAVELPSQFMENFVWEYDVLAQMSAHEETGEPLPKELFDKMLAAKNFQ RGLFLVRQMEFALFDMTIYSEDDECRLKNWPQVLDSVRKEVAVIQPPEYNRFALSFSHIF AGGYSAGYYSYAWAEVLSADAYAAFEESDDVAATGKRFWQEILAVGGSRSAAESFKAFRG REPSIDALLRHSGFDNAA >gi|289656346|gb|ADEA01000021.1| GENE 23 31656 - 32159 430 167 aa, chain + ## HITS:1 COG:no KEGG:Ssed_2205 NR:ns ## KEGG: Ssed_2205 # Name: not_defined # Def: hypothetical protein # Organism: S.sediminis # Pathway: not_defined # 4 162 61 219 219 211 65.0 7e-54 MDSDGFNIAKEGEMLYPDFGSAPLPSEDMPEDVKKDYEEAARIFIKSPRGAAALLRLGLQ KLYIHLGEEGKNINTDIRSLVNKGVFSGRVVQVADTLRITGNNAVHPGQISDADFDKAAA KMFDLINFIVKKAITEPKELDELYQLMPENARNAAEAQDKKALESKT >gi|289656346|gb|ADEA01000021.1| GENE 24 32223 - 33287 1548 354 aa, chain + ## HITS:1 COG:RSp0411 KEGG:ns NR:ns ## COG: RSp0411 COG0628 # Protein_GI_number: 17548632 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Ralstonia solanacearum # 4 354 7 340 341 201 37.0 3e-51 MHPPYPAQKFRNVSYILMGMALLAVLYFHFLPLLLAVILTYVFITKTNGLILWLRRRTLT RNTFLHKSLNAHNINLISTTLTIGIVLTVILLMSLGIYHLIHGGHITVMLTKLAAILEDT KNSSSLPQSVLNMLPNNTAEIKAYAVKLIEEYSAALTRISKNSFTSFVYILIGIIIGAML SFHRLNMRKNRRKMPPFKAELVRRIVNFETSFERVFLAQVKISLIDTALTVVYLYLILPL FGVELPFKLTVLVIAFIVGLIPVAGNLISNTIIIILSLGASLYVAVASLVFLVVIHKLEY FLNAKIIGSEIESSAWELLVAMVVFERIFGVGGIIVAPVYYAYLKNELKQQKLI >gi|289656346|gb|ADEA01000021.1| GENE 25 34230 - 35795 2467 521 aa, chain - ## HITS:1 COG:RSp0113 KEGG:ns NR:ns ## COG: RSp0113 COG0659 # Protein_GI_number: 17548334 # Func_class: P Inorganic ion transport and metabolism # Function: Sulfate permease and related transporters (MFS superfamily) # Organism: Ralstonia solanacearum # 12 481 8 480 520 317 41.0 3e-86 MKSHQKKQALGSLFKSNFASGLVVFLVALPLCLGIALASGAPPLSGVLAGIVGGIVIGSL STSHISVSGPAAGLAATILAAITELGSFELFLCAGLIAGAIQLLLGFIRAGSLAEYIPVS VIEGMLAGIGVIIIMKQIPFALGSSGSLADPAALFADIHMGSLLVAGVSMAILIVWDKIP ALKNIKALPAALVAVGAGILMNQWFVASGSSLAIPAGQLVQLPVPDTWREAAAMLTLPNF SGFGNSYVWMTGITIAIVASIETLLCIEAADRLDTRRRITDTNRELRAQGAGNIVSSLIG GLPITSVVVRSSANANAGATHKLSAVIHGVLLLVCVLAIPFILNMIPLSTLAAVLLLVGY KLAKPTTLLHFWHKGLYQFIPFAATLVAVVALDLLKGVGIGLAISIIFILQGNMKRAYYL SREELAEADEISLELAEEVSFLNKAAIKKILKNIRPGSKVTINAERSSYIAGDVLELIED FANVFAKENDIDVVLKGFKSDYDHEGRDHHSHVRVGHSASI >gi|289656346|gb|ADEA01000021.1| GENE 26 36158 - 36832 1164 224 aa, chain - ## HITS:1 COG:SPBP8B7.05c KEGG:ns NR:ns ## COG: SPBP8B7.05c COG0288 # Protein_GI_number: 19113304 # Func_class: P Inorganic ion transport and metabolism # Function: Carbonic anhydrase # Organism: Schizosaccharomyces pombe # 8 195 44 230 244 186 47.0 3e-47 MSQSYEVIFENNRKWLEQKKQQYPDYFKELADGQNPEYLYIGCSDSRVAAEGMMGLEPGE VFVHRNVANLVHGLDLNAASAIEYAVSHLKVKHIIICGHYNCGGIKAAMKPQDLGSMNPW LRSIRDVYRLHQEELDAIEDGHLRYDRLVELNVQEQCLNVIKMACVQERYLLDGYPIVHG WVFDLRTGRLIDLNIDFKNILADIQKIYDLTDSEWVVNARKKAG >gi|289656346|gb|ADEA01000021.1| GENE 27 37184 - 38425 1975 413 aa, chain + ## HITS:1 COG:NMA0409 KEGG:ns NR:ns ## COG: NMA0409 COG0814 # Protein_GI_number: 15793414 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Neisseria meningitidis Z2491 # 1 413 1 413 413 679 92.0 0 MSAKTPSLFGGAMIIAGTVIGAGMLANPTATSGVWFAGSLIVLLYTWFSMLSSGLMILEV NTHYPHGASFDTMVKDLLGPIWNVINGVAVAFVLYLLTYAYIFVGGDLTAKGLGSAVGSD VSLTVGQLVFFGILAFCVWASARLVDRFTSVLIGGMVLTFIWATGGLIADAKLPVLFDTQ APAGTSYWIYAATALPVCLASFGFHGNVSSLLKYFKGDAPRVAKSLWAGTLVALVIYVLW QIAIQGNLPRSEFAPVIAAEGQVSVLIETLSKFAQTGSMDKVLTLFSYMAIATSFLGVTL GLFDYIADIFKWNDSVSGRTKTAALTFLPPLISCLLFPTGFVTAIGYVGLAATIWTGIIP AMLLYRSRKKFGTGKNYKVYGGFGLMVWVFLFGVVNIAAQVLSQLELVPVFKG >gi|289656346|gb|ADEA01000021.1| GENE 28 38543 - 39013 693 156 aa, chain + ## HITS:1 COG:no KEGG:Sked_15040 NR:ns ## KEGG: Sked_15040 # Name: not_defined # Def: hypothetical protein # Organism: S.keddieii # Pathway: not_defined # 10 153 3 144 151 75 34.0 6e-13 MRTIRHPSMYDHIRFHTEEDYPENLPPENAATHIGMYWQWAAQAGLANPVWQAAPETAAD FAAMIEGRFSGAQFLLKHMDGALTPDDFNPFGQSFTSYYYDDEEEGYGAFMEDYVRTLDT PSLGGFYYVEDSPETYAKLAPVFQTAFEKWKSSLVM >gi|289656346|gb|ADEA01000021.1| GENE 29 39041 - 40108 1316 355 aa, chain + ## HITS:1 COG:MA3757 KEGG:ns NR:ns ## COG: MA3757 COG0438 # Protein_GI_number: 20092555 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Methanosarcina acetivorans str.C2A # 138 298 119 296 351 73 28.0 4e-13 MQITQKSKTDIAINCFRRGGGMESYTFDLVRGLRARGAEIAVYAAQADPAVPEYNQVEIH RINQQIIPKKLRPYFFTRQLARARRGRNVPLVACNPSDHADIFVCGGTHLGYLHNMGERP GLLDRLTIRRNRSNYATAKSIMAHSHLMQRELTALYGVPPEKIRVIHPPADTARFRPAPD ETAAVRAKYGFRDDETVFLFPSTGHKRKGLDLLADFFEHTDLPVKLAVAGSPLPRPMKNV VGLGFCTNMPELYRAVDFTVMASLYEPFGLVGVESVLCGTRVVLSDNMACTEVMNDEAGF FFSRSRPETLAQAVAQAAALKQQGRHKIADPMQALTYNPTLEHHIDQTVAMLEAV >gi|289656346|gb|ADEA01000021.1| GENE 30 40200 - 40778 1109 192 aa, chain + ## HITS:1 COG:NMA0405 KEGG:ns NR:ns ## COG: NMA0405 COG0241 # Protein_GI_number: 15793412 # Func_class: E Amino acid transport and metabolism # Function: Histidinol phosphatase and related phosphatases # Organism: Neisseria meningitidis Z2491 # 1 187 1 187 187 326 83.0 2e-89 MKLIILDRDGVINQDRDDFVKSADEWIPIEGSMDAIAFLTQAGYTVAVATNQSGIGRKYF TVQDLTEMHAKMHRLAVQAGGAIDGIWFCPHTAADNCDCRKPKPGMICDILERFKADPAE TWLVGDSLRDLQAVDAAGGKSALVLTGKGKKTLSEHENELPENTQIFDNLLAFSQYIMQE TAQDRADGQANA >gi|289656346|gb|ADEA01000021.1| GENE 31 41111 - 41845 1169 244 aa, chain + ## HITS:1 COG:NMA0404 KEGG:ns NR:ns ## COG: NMA0404 COG0204 # Protein_GI_number: 15793411 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Neisseria meningitidis Z2491 # 1 239 1 239 247 416 82.0 1e-116 MLLIRNLTYWFILSTSLILLFPFMLLALPVQGGAHKMAQIWVRILNWSLKHIIGLKYRLI GAENIPDRPSIICAKHQSGWETLALQEIFPPQVYVAKRELFKIPFFGWGLKLVKTIGIDR SNSREANKQLMEQGMARKNEGYWITIFPEGTRLPPGEKGRYKLGGARMAKMFEMDIVPVS LNSGEFWPKNSFLKHPGTITVVIHPVIPHSSGTEAELMAECEKRIETQQPLIEGKGPFAV AKVV >gi|289656346|gb|ADEA01000021.1| GENE 32 41879 - 42574 967 231 aa, chain + ## HITS:1 COG:NMA0032 KEGG:ns NR:ns ## COG: NMA0032 COG1451 # Protein_GI_number: 15793065 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Neisseria meningitidis Z2491 # 3 231 2 230 230 309 69.0 2e-84 MSRHYAHTLSDGQSIRIRLKRSAKKNLILRPVSRDTVSINVPPFVSHRTLAQWLTDNEPL LRRTLAQAPAAAASADTLPEWIWYQGVQTTLSVHSGSHIQIRPSEILLPDKEPATQLTHL RRFLHERAREYLLPRLEHHARATALIPAATALSNAKTFWGVCRHTTGIRLNWRLIGAPDY VADYICIHELCHLPHPDHSPQFWATVNRLTPHTQAAKTWLKAYGRELFFLG >gi|289656346|gb|ADEA01000021.1| GENE 33 42700 - 43689 1500 329 aa, chain + ## HITS:1 COG:NMB2060 KEGG:ns NR:ns ## COG: NMB2060 COG0240 # Protein_GI_number: 15677882 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Neisseria meningitidis MC58 # 1 329 1 329 329 543 85.0 1e-154 MKITVLGAGSWGTALALHFSQHGNEVALWSRNTAYMKKLQADRENKKGLPGFTFPDTLHV HTDLGEALKGSELAIIATSVAGLRDSATLLKQNDAAHLPVLAACKGFEQDTGLLTFQVVK NVLPGNKKIGVLSGPSFAQELAQQLPCAVVLASENKEWIEELIPQLNTGVMRLYGSNDAV GVAVGGAVKNIMAIATGLSDGLEYGLNARAALVTRGLAEITRLAVAMGAQPKTLMGLAGI GDLILTCTGALSRNRRVGLGLAEGKELHQVLMEIGHVSEGVSTIEEVFNTAAKYQIDMPI TQTLLQLIRKEMTPQQVVERLMERNARFE >gi|289656346|gb|ADEA01000021.1| GENE 34 43828 - 44154 627 108 aa, chain + ## HITS:1 COG:no KEGG:NGK_2214 NR:ns ## KEGG: NGK_2214 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 1 108 15 122 123 83 58.0 2e-15 MNHSLDKLEISVYQLAQKFETLIGENSRLNEEITRLKLEQEKQKAAHENAVDELSEALLV QVGKLKEDLQGKIDQLNIEKDQYRNALAQSAAQIRRLLARLPKEEQPQ >gi|289656346|gb|ADEA01000021.1| GENE 35 44164 - 44460 603 98 aa, chain + ## HITS:1 COG:NMA0377 KEGG:ns NR:ns ## COG: NMA0377 COG3027 # Protein_GI_number: 15793385 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 98 1 99 101 113 64.0 9e-26 MSLEQVSLDIMNVNFNINTPAEEKDTLLQAVDMLNKKIETIRQNGRIVGTDKIAIMAALN VVHDLLKMSMKDGLAIGEFERKITDMTNACDKALSRLG >gi|289656346|gb|ADEA01000021.1| GENE 36 44840 - 45271 742 143 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225374042|ref|ZP_03751263.1| hypothetical protein NEISUBOT_02339 [Neisseria subflava NJ9703] # 1 143 1 143 143 290 97 2e-77 MKTFSAKPHEVKREWFVIDAEDKVLGRVAAEVAHRLRGKHKPEYTPHVDTGDYIIVINAD KLRVTGAKFEDKKYYRHSGFPGGIYERTFREMQEQFPGRALEQAVKGMLPKGPLGYAMIK KLKVYAGAEHAHAAQQPKTLELK >gi|289656346|gb|ADEA01000021.1| GENE 37 45281 - 45673 638 130 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15677878|ref|NP_275046.1| 30S ribosomal protein S9 [Neisseria meningitidis MC58] # 1 130 1 130 130 250 97 2e-65 MNGKYYYGTGRRKSSVARVFLQKGSGQIIVNGRPVDEFFSRETSRMVVRQPLVLTENAES FDIKVNVVGGGETGQSGAIRHGITRALIDFDAALKPALSQAGFVTRDAREVERKKPGLRK ARRAKQFSKR >gi|289656346|gb|ADEA01000021.1| GENE 38 45932 - 46180 178 82 aa, chain + ## HITS:1 COG:RSc1077 KEGG:ns NR:ns ## COG: RSc1077 COG2261 # Protein_GI_number: 17545796 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Ralstonia solanacearum # 1 82 1 82 82 59 45.0 1e-09 MGWLSTILVGFIVGVLAKFFHPGNDNLGFIMTTILGIAGATLAGFIGQNAGWYQVGETAG WIASTICAVIILAIYTHLIKKR >gi|289656346|gb|ADEA01000021.1| GENE 39 46585 - 46758 96 57 aa, chain + ## HITS:1 COG:NMA0612 KEGG:ns NR:ns ## COG: NMA0612 COG0526 # Protein_GI_number: 15793602 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Neisseria meningitidis Z2491 # 3 57 115 169 169 69 52.0 2e-12 MHFQTVNDSDGLIANQWQISATPTIIFIKDGQMISSTTGISSYWGLRGKIWLKNLLG >gi|289656346|gb|ADEA01000021.1| GENE 40 47072 - 47509 449 145 aa, chain + ## HITS:1 COG:NMA0613 KEGG:ns NR:ns ## COG: NMA0613 COG1846 # Protein_GI_number: 15793603 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Neisseria meningitidis Z2491 # 1 144 1 144 146 217 86.0 6e-57 MPTQSKHASINIGLIQAREALMTQFRPILNQANITDQQWRIIRLLAENGTLDFQDLANKA CILRPSLTGILTRLEKAGMAVRLKPSNDQRRVFLKLTQEGEKLYQSIGEKVDERYDAIEN VFSKEKLEKLKELLTELAMIEKSLK >gi|289656346|gb|ADEA01000021.1| GENE 41 47527 - 48027 414 166 aa, chain + ## HITS:1 COG:NMA0614 KEGG:ns NR:ns ## COG: NMA0614 COG1853 # Protein_GI_number: 15793604 # Func_class: R General function prediction only # Function: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family # Organism: Neisseria meningitidis Z2491 # 7 166 7 166 166 251 72.0 4e-67 MTLPTHTFKQSFRDAMASCASGVHVITTDGAAGRYGITMTAVTSVTDEPPTMMLCINREA GIIPILLANRDLCINTLSHKQQDIAEHFAGMTNLSPEERFTYHIWNRGQNGQLEVEGALA QLHGSIIAQKEMGTHFVFFAQINEIKTLNTRSPALLYFRRSFRSLD >gi|289656346|gb|ADEA01000021.1| GENE 42 48331 - 49029 349 232 aa, chain + ## HITS:1 COG:NMB1841 KEGG:ns NR:ns ## COG: NMB1841 COG1208 # Protein_GI_number: 15677677 # Func_class: M Cell wall/membrane/envelope biogenesis; J Translation, ribosomal structure and biogenesis # Function: Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) # Organism: Neisseria meningitidis MC58 # 1 232 1 230 231 301 65.0 7e-82 MKAMILAAGRGERMRPLTDNCPKPLLQVGKEPLIGWHLRRLKQAGITEIVINHAWLGEKI EETLGNGYQYGVKISYSPERNGGLETAGGIATALPLLGDEPFLVVNGDILTDIDFQTAFQ ISDTLIQQKKSAYLWLVSNPPHNPNGDFVLDSDGRIYPDNKAKGETLTFSGMGVYQPTLF KNTPAHQIAKLAPLLRIAMNNNSVIGEKHNGLWLDVGTVERLETANKLAENW >gi|289656346|gb|ADEA01000021.1| GENE 43 49171 - 50379 919 402 aa, chain - ## HITS:1 COG:NMA2057 KEGG:ns NR:ns ## COG: NMA2057 COG0206 # Protein_GI_number: 15794935 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division GTPase # Organism: Neisseria meningitidis Z2491 # 1 402 1 392 392 540 77.0 1e-153 MELVYDVVESAASPAIIKVIGLGGGGCNAINNMIENTIQGVEFISANTDAQSLGKNNAAK RIQLGTNLTRGLGAGANPEIGRAAAQEDREAIEDAIHGANMLFITTGMGGGTGTGAAPVV AEIAKEMGILTVAVVTRPFGYEGKRVHIAQVGLEQLKSQVDSLIIIPNDKLMTALGEDVT MREAFRAADNVLRDAVAGISEVVTRPGFINLDFADVKNVMGIKGIAMMGSGYSQGIDRAR LATEHAISSPLLDNVTLDGARGVLVNITTAPDCLKMSEYREIMKVVNENAHPEAECKYGT AEDDSMSEDAIRVTIIATGLKESNDTNQFRAAARTQQLVGGADNVTSQPHQHHQQAGMDG LVRSGRNARNMNLTAADFGNQSVLDDFEIPAILRRQHSASDK >gi|289656346|gb|ADEA01000021.1| GENE 44 50680 - 51924 1082 414 aa, chain - ## HITS:1 COG:NMB0426 KEGG:ns NR:ns ## COG: NMB0426 COG0849 # Protein_GI_number: 15676338 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Actin-like ATPase involved in cell division # Organism: Neisseria meningitidis MC58 # 1 414 1 414 414 576 73.0 1e-164 MEQQGKYISALDIGTSKVIALIGEVQEDNEIHIVGLGQAPSRGLKAGMVTNIDATAQAIR QAVNEAELMADTKISHVTTGIAGNHIRSLNSQGVVKIKDGEVSQADIDRAIETAKAVNIP PDHNILHTVVQEYIIDNQPGVKEPIGMSGVRLDTRVHIITGAITALQNIQKCIHRCGLQM DQIMLQPLASGQAVLTEDEKDLGVCVIDIGGGTTDIAVYTNGAIRHTAVIPVAGDLITKD LAQALRTPHSAAEYIKIHYGVAMPTMDGLDEMVEVPSVGDRQPRQISRRVLASVIGPRVE EILELTLNELRRSGFPEEVLTSGIVLTGGASMLTGIVELAEEVFNLPARIGVPQEMGGVS ERIRNPRYATAIGLLQAARGEEDGTAVAGAVAVSEQGPKVSLWSRFQKWLKDNF >gi|289656346|gb|ADEA01000021.1| GENE 45 51939 - 52682 629 247 aa, chain - ## HITS:1 COG:NMA2059 KEGG:ns NR:ns ## COG: NMA2059 COG1589 # Protein_GI_number: 15794937 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division septal protein # Organism: Neisseria meningitidis Z2491 # 1 243 1 242 242 281 55.0 9e-76 MWDDAGALGRLTRWLLLLMVLMLLGAGVAWIYNSPYFPVKQVSIQGKLLHTDGKQLQAIA HEYMRGNIFRADVNGAQTAFSQLPWISSAAVRRRLPDTVEIILKEREPVAKWYDIGLVDM QGNVFPAKIPDNLPVFEGQEGTGKDMVQRYREFTDILEPQGLKIGKLIYTPRSAWSIELD NGIMIRLGRENEIFRLQRFAGIWPSLLKKHENRLAYVDMRYKDGFAVRYSKPLDEPSEKE VQEQTSN >gi|289656346|gb|ADEA01000021.1| GENE 46 52672 - 53583 776 303 aa, chain - ## HITS:1 COG:NMB0424 KEGG:ns NR:ns ## COG: NMB0424 COG1181 # Protein_GI_number: 15676336 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanine-D-alanine ligase and related ATP-grasp enzymes # Organism: Neisseria meningitidis MC58 # 1 303 1 304 304 500 85.0 1e-141 MQNFGKVAVLMGGFSSERNVSLDSGAAIVAALKGRGVDAHAFDPKETPLADLKTQGFQTA FNILHGTYGEDGVVQGTLELFGIPYTGSGVAASAIGMDKYRCKLIWQALGLPVPEFAVLR EDTDFEAVEKRLGLPMFVKPANEGSSVGVVKVKEKGRLKDVYAELKHMKGEIIAERFIGG GEYSCPVLGGRGLPSILIVPATEFYDYEAKYNRDDTVYRCPSDLNAADEELMRELAVRGA EAIGAEGCVRVDFLKDLDGKLYLLEINTLPGMTSHSLVPKSAAQIGMDFPDLCIEILKTA HVG >gi|289656346|gb|ADEA01000021.1| GENE 47 53776 - 55185 1869 469 aa, chain - ## HITS:1 COG:NMA2061 KEGG:ns NR:ns ## COG: NMA2061 COG0773 # Protein_GI_number: 15794939 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate-alanine ligase # Organism: Neisseria meningitidis Z2491 # 1 468 38 505 506 875 93.0 0 MMKNRVTNIHFVGIGGSGMSGIAEVLHNLGFKISGSDQAKNAATEHLSSLGIQVYPGHTA EHVNGADVVVTSTAVKKDNPEVVAANEQQIPVIPRALMLAELMRFRDGIAIAGTHGKTTT TSLTASILGAAGLDPTFVIGGKLNAAGTNARLGKGEYIVAEADESDASFLHLTPIMSVVT NIDEDHMDTYGHSVEKLHQAFVDFIHRMPFYGKAFLCVDSAHVRAILPKVSKPYATYGLD DTADIYATDIENIGAQMKFTVHVNMKGHERKTFGVVLNMPGRHNVLNALAAIGVALEVGA PVEAIQQGLLGFEGVGRRFQKYGDIKLPNGGTALVVDDYGHHPVEMAATLAAARGAYPEK RLVLAFQPHRYTRTRDLFEDFTKILNTVDLLVLTEVYAAGEEPIAAADSRALARAIRVLG KLEPIYCESVSELPAMLLNVLQDGDMVLNMGAGNINRVPTALLELSQQT >gi|289656346|gb|ADEA01000021.1| GENE 48 55330 - 56400 1305 356 aa, chain - ## HITS:1 COG:NMA2062 KEGG:ns NR:ns ## COG: NMA2062 COG0707 # Protein_GI_number: 15794940 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase # Organism: Neisseria meningitidis Z2491 # 1 347 1 346 355 658 96.0 0 MGGKTFMLMAGGTGGHIFPALAVADSLRARGHHVIWLGSEGSMEERIVPQYDDILLETLA IKGVRGNGIKRKLMLPFTLYKTVREAQRIIRKHRVECVIGFGGFVTFPGGLAAKLLGVPI VIHEQNAVAGLSNRQLSRWAKRVLYAFPKAFSHEGGLVGNPVRADIANLPAPAERFAERE GRLKILVVGGSLGADVLNKTVPQALALLPDDARPQMYHQSGRGKLGSLQADYDALGVKAE CVEFITDMVSAYRDADLVICRAGALTIAELTAAGLGALLVPYPYAVDDHQTANARFMVQA EAGLLLPQTQLTAEKLAEILGGLNREKCLKWAENARTLALPHSADDVAEIAIETIS >gi|289656346|gb|ADEA01000021.1| GENE 49 56404 - 57564 1541 386 aa, chain - ## HITS:1 COG:NMB0421 KEGG:ns NR:ns ## COG: NMB0421 COG0772 # Protein_GI_number: 15676333 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Neisseria meningitidis MC58 # 7 386 9 423 423 458 60.0 1e-129 MKSISKFLDRSIVRSGQKIDMSLLWMVVLMTAFSLMMIYSASIAYAAGEEGTKWSFVLKQ AAFVAGSVAVCGGAALFMPMYRWKKFTPWYLIGCFVLLCAVLVLGREINGARRWIHLGPV NLQPTEMFKLAVVLYLSSFFTRRVEVLKQAKKILFPGAVVGIGLALMMLQPDFGSFVVVT VVAMGMLFLAGFPWKYFVMMLAAAMTGMVSLIAVAPYRMARVSAFLNPWEDPLGKGYQLT HSLMAIARGEWFGVGLGASLEKRFYLPEAHTDFIFAVIGEEFGFMGMCLLVFCYGWLVFR AFSIGKQARDLELFFSAYVAKGIGIWLGIQSFFNIGVNIGILPTKGLPLPLMSYGGSSVV VMLLCMTLLLRIDYENRQKMRGYQVE >gi|289656346|gb|ADEA01000021.1| GENE 50 57605 - 58942 1751 445 aa, chain - ## HITS:1 COG:NMA2064 KEGG:ns NR:ns ## COG: NMA2064 COG0771 # Protein_GI_number: 15794942 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramoylalanine-D-glutamate ligase # Organism: Neisseria meningitidis Z2491 # 1 445 1 445 445 864 97.0 0 MTFQNKKILVAGLGGTGISMIAYLRKNGAEVAAYDAELKPERVSQIGKMFDGLVFYTGRL KDALDNGFDILALSPGISERQPDIEAFKQNGGRVLGDIELLADIVNRRGDKVIAITGSNG KTTVTSLVGYLCIKCGLDTVIAGNIGTPVLEAELQREGKKADVWVLELSSFQLENTESLR PTAATVLNISEDHLDRYDDLLDYAHTKAKIFRGDGVQVLNSDDVFCRAMKRAGREVKWFS LEQEADFWLERETGRLKQGNEDLIATQDIPLQGLHNAANVMAAVALCEAVGLPREALIEH VKTFQGLPHRVEKIGEKNGVVFIDDSKGTNVGATAAAIAGLQNPLFVILGGMGKGQDFTP LRDALAGKAKGVFLIGVDAPQIRRDLDGCGLNMTDCATLEEAVQTAYAQAEAGDIVLLSP ACASFDMFKGYAHRSEVFIEAFKAL >gi|289656346|gb|ADEA01000021.1| GENE 51 59003 - 60085 1731 360 aa, chain - ## HITS:1 COG:NMA2066 KEGG:ns NR:ns ## COG: NMA2066 COG0472 # Protein_GI_number: 15794944 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase # Organism: Neisseria meningitidis Z2491 # 1 360 1 360 360 565 87.0 1e-161 MFVWLSHLSDWLSALNVFQYTTFRAVMAALTALVFSLLLGPWTIRKLTQLKVGQAVRTDG PQTHLIKNGTPTMGGSLILTAIAVSTLLWGNWANPYIWILLAVLLATGALGFYDDWRKVV YKDPNGVSAKFKMVWQSSVAILAGVFLFYAAELPSSTAFIVPFLKQIAYPLGGVGFVVLT YFVIVGTSNAVNLTDGLDGLAAFPVVLVAGGLAIFAYASGHAQFAQYLQLPYVAGANEVV VFCAAMCGACLGFLWFNAYPAQVFMGDVGALALGAALGTVAVIVRQEIVLFIMGGLFVVE AVSVMLQVGWYKRTKKRIFLMAPIHHHYEQKGWKETQVVVRFWIITIVLVLVGLSTLKIR >gi|289656346|gb|ADEA01000021.1| GENE 52 60443 - 60631 241 62 aa, chain - ## HITS:1 COG:no KEGG:NMB0417 NR:ns ## KEGG: NMB0417 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis # Pathway: not_defined # 1 54 1 54 58 102 88.0 4e-21 MKNRRFFKALLLIAALIGTFYAGMRTQAYLYEDLCLDLGGGKNPGNYPICVLDKNVADER LK >gi|289656346|gb|ADEA01000021.1| GENE 53 60634 - 62001 1466 455 aa, chain - ## HITS:1 COG:NMB0416 KEGG:ns NR:ns ## COG: NMB0416 COG0770 # Protein_GI_number: 15676328 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide synthase # Organism: Neisseria meningitidis MC58 # 1 452 1 455 455 763 90.0 0 MKPLDLNFICQTLNLPTPSENKPVSRIVTDSRDICAGDVFFALAGERFDAHDFVEDVLAA GAAAVVVSHEDCAALDGALKVDDTLAALQTLAKAWRDNVNPFVFGITGSGGKTTVKEMLA AVLRRRFGDDAVLATAGNFNNHIGLPLTLLKLKEKHRYAVIEMGMNHFGELAVLTQIAKP DAALVNNALRAHVGCGFDGTLDIAKAKSEIYQGLGEDGLALIPCEDEHAAVFQTTSQGHQ QRTFGVDSGDVHAENIVLKPLSCEFDLVCGNERAAVVLPVPGRHNVHNAAAATALALAAG LSLNDVAEGLQGFSNIKGRLNVKAGIKGATLIDDTYNANPDSMKAAIDVLARMPAPRIFV MGDMGELGEDEAAAMHAEVGAYARDQGIEAAYFVGDNSVEAAETFGADGLWFAAKDPLIQ VLSHDLPERATVLVKGSRFMKMEEVVEALTNKEAV >gi|289656346|gb|ADEA01000021.1| GENE 54 62033 - 63046 791 337 aa, chain - ## HITS:1 COG:no KEGG:RoseRS_2454 NR:ns ## KEGG: RoseRS_2454 # Name: not_defined # Def: hypothetical protein # Organism: Roseiflexus_RS-1 # Pathway: not_defined # 98 331 83 312 494 107 28.0 9e-22 MGIFRCNKCGCMNEHYYESGMSEIACPKCTAPVKVYDTLFFVSKLLERYFSVGWELQALK QQEDGGEENAQQDTGSVNQNYNPLADVNLSETDILATEKQHEPLRQWFARANIVPMFNLQ AVNMSGFFDEAAAKLGSNYQITKNMLGQISWAYSHNHTSISLDVGKMSQKDGQTMNNLCR QFYSHTLFSKYFYQKQEKIVRLNLQRATAIKHFFCGGWLEWFALGKMLEEAKQKGKDYAF SCARNIKIEFDNEDKHELDVVFLPMGKEPIVVECKSGEFRRDIEKYVRLKKRLNLPDDRF VILAVDLEESQAVALGSMYGLTFVTPKSMMKHLRMVM >gi|289656346|gb|ADEA01000021.1| GENE 55 63108 - 63629 577 173 aa, chain - ## HITS:1 COG:DR0598 KEGG:ns NR:ns ## COG: DR0598 COG0739 # Protein_GI_number: 15805625 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Deinococcus radiodurans # 8 173 28 196 197 155 49.0 4e-38 MLKMPTKTFLISAAMILFAGCTTKQLPRPNAEIAELRAKEPPAVQSLPNPVKGKRFDDTW GAARSQGRRHEGVDIFAKKNTPIRSTTPGIVTKIGRNRLGGKVIGIQGPGAWHYYAHLNK FASVRLYERVKEGQVIGYVGKTGNAKTTPAHLHYGVYLPNGAINPYPLINQER >gi|289656346|gb|ADEA01000021.1| GENE 56 63818 - 65296 1816 492 aa, chain - ## HITS:1 COG:NMB0414 KEGG:ns NR:ns ## COG: NMB0414 COG0769 # Protein_GI_number: 15676327 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl tripeptide synthase # Organism: Neisseria meningitidis MC58 # 1 491 1 491 492 947 91.0 0 MFSELSPIAETNFPPLLCANAAGRLLHSDSRQIKQGDIFVACQGEYTDGRSYIPAAIANG AAFVFWDDDGKFEWNPEWEVPNQGIKDLKHRAGMLAAQVYGNVSDDLKVWGVTGTNGKTS ITQWLAQAADLLGEKTTIIGTVGNGFWGALEETTHTTPAPVDVQTLLYRFRQQGATAAAM EVSSHGLDQSRVNGVPFRSTIFTNLTRDHLDYHGTMEAYGAIKSRLFYWHGLKHAVINVD DEYGAELAGRLKKDCPDLAVYSYGFSEHADIRIVHFTASSDGMEAVFQTPWGEGRCRTRL LGRFNAQNLAACIALLCANGYPLDKVLDVLAKIRPASGRMDCIMNSGKPLVVVDYAHTPD ALEKALATLQEIKPQGAALWCVFGCGGNRDRGKRPLMGAAAVQGADKVVVTSDNPRLENP QDIINDILPAVPAPECVEADRATAIRYAVERAASSDIILIAGKGHENYQDMQGVKHHFSD FEVAEKALAERI >gi|289656346|gb|ADEA01000021.1| GENE 57 65323 - 67068 1802 581 aa, chain - ## HITS:1 COG:NMA2072 KEGG:ns NR:ns ## COG: NMA2072 COG0768 # Protein_GI_number: 15794948 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Neisseria meningitidis Z2491 # 1 581 1 581 581 902 76.0 0 MLIRNEFKPQMLPKAPKAKKPISSNGRILVVLGALAVGFAGLLGRGVYLQTSQHEFLKNQ GDQRFVRTLTLPASRGMITDRNGATLALSAPTESLFAMPSEMDEMPTEAQLEKLSSIIDV PVASIKEKLGKKKDFIYLKRQLSKEKADEIAALGIKGFGFQKELKRHYPMGNLFAHVIGF TNIDGKGQEGLELSREDILRGSDGAKVVLRDNKGNIVDSLDSPRNNAPKNGRDMVLSLDQ RIQTLAYEELNKAVDYHQAKAGTVVVLDAQTGEILALVNSPAYDPNQPGSAGSEQRRNRA VTDMIEPGSAMKPFTIAKALDSGKVNTSQRFNTNPYKIGPATVRDTHVYPSLDLRGIMQK SSNVGTSKLSAMFKPKEMYDFYHDLGVGVRMHSGFPGESAGLLRNWKRWRPIEQATMSFG YGLQLSLLQLARAYTMLTHNGELLPVSFEKQAVAPEGKRVIKAETARQIREMMVAVTEPG GTGTAGAVDGFDVGAKTGTARKLINGRYVDNKHVATFVGFAPAQNPRVIVAVTVDEPTAN GYYGGTVAGPVFKQVMSGSLNILGVSPTKPLKEAATVKVSS >gi|289656346|gb|ADEA01000021.1| GENE 58 67188 - 67451 280 87 aa, chain - ## HITS:1 COG:NMA2073 KEGG:ns NR:ns ## COG: NMA2073 COG3117 # Protein_GI_number: 15794949 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 87 3 89 89 87 58.0 5e-18 MNKLNVILLVAASASGFVVVTVQDQARRNYMVLDKAQKQEIKLEQDYARLKLGQAKLSNH KLIKVAAEKQRLQPPSAHNTVMVEHGK >gi|289656346|gb|ADEA01000021.1| GENE 59 67453 - 68424 457 323 aa, chain - ## HITS:1 COG:NMA2074 KEGG:ns NR:ns ## COG: NMA2074 COG0275 # Protein_GI_number: 15794950 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis # Organism: Neisseria meningitidis Z2491 # 1 314 1 314 328 497 84.0 1e-140 MSEAGEYKHITVLLNEAVDALNIRPDGVYVDGTFGRGGHSRLILSRLGEEGRLIVFDKDP QAIVAARKLAAYDMRVSVVHDGFSVFQTALDELGIGKVDGALFDLGVSSPQIDEGGRGFS FRFDAPLDMRMDPTRGMSAAEWIATASEQDLNEVIKNYGEERFSRQIARAIVAQREESPI DTTRKLAQLVAQNVRTRERGQDPATRTFQAVRIFINRELEEIEAVLPQATGRLKEGGRLA VIAFHSLEDRIVKQFIKKQSQHAPLPRWVAVKEADLPQPPLRPVGKAVRPSDAEIQANPR SRSAVLRVAERTAGSFNAEGKAV >gi|289656346|gb|ADEA01000021.1| GENE 60 68421 - 68876 637 151 aa, chain - ## HITS:1 COG:NMB0410 KEGG:ns NR:ns ## COG: NMB0410 COG2001 # Protein_GI_number: 15676323 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 1 151 1 151 151 229 78.0 2e-60 MFGGVHELSIDSKGRLAIPAKFRDILLRRYTPAVVVTLDSRQRLLMYPESEWEKVSQQLL ALKVNGNPVLQRYQNLLLHNAELLEWDSAGRILLSANLRKRVDFEKEVTLAGRANRLELW GREHWEAEMNQALDINPEELDYQLSQTDLQL >gi|289656346|gb|ADEA01000021.1| GENE 61 69229 - 70380 863 383 aa, chain + ## HITS:1 COG:NMA2076 KEGG:ns NR:ns ## COG: NMA2076 COG1565 # Protein_GI_number: 15794952 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 3 383 24 405 405 508 65.0 1e-143 MKLQIPAPSPAAQHSCRQLCRLISDEISDNGNWIPFSRFMELALYAPDFGYYTGGSHKIG AGGDFITAPVLSPLFGKTLFAQLSVLLPQTAGNIYEFGAGTGDLAVSLLQNFSDGLSHYY IVELSPELAERQRAMISNSLPPETARKIIHLDTLPDEFDGIVIGNEVLDAMPVELVRKEG GNFQQIGVSIKNGEFVQVPKTLATPTLLRSAENYFPDAEPYTSELHPAQHAFVHTVASKL RRGGMIFIDYGFDAAQYYHPQRHMGTLIGHYRHHTVHDPFFLPGLTDLTAHVNFTDIAQA ATDAGLDLIGYTTQANFLLNLGITDLLAQTGHPDTAAYLTAAAAVQQLVNPHEMGELFKV IAFGKNIDTNWQGFAFGDICHTL >gi|289656346|gb|ADEA01000021.1| GENE 62 70843 - 71664 759 273 aa, chain - ## HITS:1 COG:NMB1828 KEGG:ns NR:ns ## COG: NMB1828 COG2819 # Protein_GI_number: 15677664 # Func_class: R General function prediction only # Function: Predicted hydrolase of the alpha/beta superfamily # Organism: Neisseria meningitidis MC58 # 8 271 48 309 310 285 55.0 8e-77 MTSRISKWQDARLLQAQETQIHSQHTGRSYRIQTACIGTPPLQGCPVLYILDGDTFFPAA LSMAQSLLVNPMTRSNAPCLLVGIGYPNGAIRDLQRRALDYTPPLPAGATEADCRRYGQA DRFGAFIDGELMPLLADRFPINTAEQALFGHSFGALFGAYSLLVSTKRFRRYFLVSPSMW WHNRRLLDFMPSEIPQECYAEIRVGGLEQPACNGTRHQRERNMVTQAEDFASKLRGKGVE TVFGNYPNDNHGSVPFRALPDCLAALAKAWQAV >gi|289656346|gb|ADEA01000021.1| GENE 63 71940 - 74042 2901 700 aa, chain - ## HITS:1 COG:NMB1829 KEGG:ns NR:ns ## COG: NMB1829 COG4773 # Protein_GI_number: 15677665 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid # Organism: Neisseria meningitidis MC58 # 1 700 7 708 708 1110 82.0 0 MFRHNLIAVAVLAAFSSAVSAAEQVNLETVHVQGQRSYNAIATEKNGDYSSFAATVGTKI PASLREIPQSVSIITNQQVKDRNVDTFDQLARKTPGLRVLSNDDGRSSVYARGYEYSEYN IDGLPAQMQSINGTLPNLFAFDRVEVMRGPSGLFDSSGEMGGIVNLVRKRPTKEFQGHAA AGFGTHKQYKAEADVSGRLNADGSVRGRVMVQTSGASPRPAEKNNHHETFYAAADWDINP DTTLGVGYLYQQRHLAPYNGLPVNHDGSLMKLPEHTFVGADWNKFKMNSHDVFADLKHYF GNGGYGKVGVRYSDRDADSNYTFAGSKRAENGSATVTGLGTDIRQKAFAFDASYSQPFRL GNTANEFVVGADYNHFKSTTEQGRSALARGVALGDFRSVPYVNLLQQARAGTRGYNYSVS KENLDEFGLYGKTVFRPVDGLSLIAGGRVGHYKIEAGDDTGLNKADKTKFTGYAGAVYDL NDANSLYASFSQLYTPQTSLGTDGKLLKARQGNQFEAGYKGSYMNERLNTRVSFYRMQDK NAAASIVGDSTHYAALGKRVMEGVETEISGAITPKWQIHAGYSYLHSQIKASSTNRDDGI FLLMPKHSANLWTTYQVTPKLTLGGGVNAMSHITSSAGLRAGGYATFDAMAAYQFTPKLK LQVNADNIFNRHYYTRVGSANTFNIPGAERSLMANVRYDF >gi|289656346|gb|ADEA01000021.1| GENE 64 74415 - 75323 1173 302 aa, chain + ## HITS:1 COG:NMB1967 KEGG:ns NR:ns ## COG: NMB1967 COG2207 # Protein_GI_number: 15677797 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Neisseria meningitidis MC58 # 5 301 6 305 305 326 55.0 3e-89 MSTLHINSRHFMRLVQQGDSNDYLSGHYHFDTLHSGISLHGGRATAEQDLHCSRLTDAYV NFVILLEGRLDFGINRERYCIRADGGKVILVAAGEEILFSRYLHRGETTVKIALKGIEHW LSQPQYRHLLSHVYREPVRSWPLDDGLAVLVGRCLQRPDGSIADALQQEADALQLLAGLW RDFLARHPVQTACEVSVPSESFVHSLNHAFDNGAHQVAELAAALHISERTLQRRLRESFG ITASDWLRHKHMQYALYALTTGQESISETAYRCGYRHTSSFTQAFKQYFDCTPAEMQRRG RE >gi|289656346|gb|ADEA01000021.1| GENE 65 75379 - 78813 4888 1144 aa, chain - ## HITS:1 COG:NMB1827 KEGG:ns NR:ns ## COG: NMB1827 COG0587 # Protein_GI_number: 15677663 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit # Organism: Neisseria meningitidis MC58 # 1 1144 1 1144 1144 2267 95.0 0 MTEPTYIPLRLHTEFSITDGMVRIKKLIAKAQEYGLPALGISDLMNEFGLVKFYKACRSA GIKPVGAADVWIGNPNAPDKPFRAMLIIRNDAGYLRLSELLTAAYVGKDRNVHHAELNPE WLENGDNSGLICLSGAHYGEVGVNLLNGNEDAARSAALKYAAWFPDAFYLELQRLPERPE WEACVSGSVKLAEELGLPVVATHPTQFMSRDDFNAHEARVCIAGGWVLTDKKRPRDFTPS QFFIPPETMLERFADLPEALENTVEIAKRCNIHITLGKNFLPLFPTPDGLSLDDYLVKLS NEGLQERMVQLYPDEAERAAKMPEYQERLDFELNIIIQMKFPGYFLIVQDFINWAKTHGC PVGPGRGSGAGSLVAYSLKITDLDPLKYALLFERFLNPERVSMPDFDVDFCQSNRGRVIE YVRDKYGAQAVSQIVTFGTMSSKAVIRDVGRVLELPFTLCDKLSKLIPLEANKPLGLDDA MKAEPQIQELIEAEEADELITLAKKLEDLTRGLGMHAGGVLIAPGKISDYSPVYQADESA SPVSMYDKGDVEDVGLVKFDFLGLRNLTIIEMAQNNIKNTTGDIVDVGKIPLDDQAAYKI FRDANTTAVFQFESTGMKKMLKTAHTTKFEELIAFVSLYRPGPMDNIPDFVARMKGQEFQ YIHPLLEGILAPTYGIMVYQEQVMQAAQIIGGYSLGGADLLRRAMGKKKPEEMVKHREIF AEGAAKQGISREKSDEIFNYMEKFAGYGFNKSHAAAYALISYQTAWLKAHYPAEFMAATM SSELDNTDQLKHFYDDCRANGIEFLPPDINESDYRFTPYPNMKIRYALGAIKGTGEAAVE SIIAARQSGGKFTGLLDFCERVGKEHMNRRTLEALIRGGAFDSIEPNRAMLLANIDLAMN NADQKAANANQGGLFDMMEDAIEPVQLIDAPMWSESEKLAEEKTVIGFYLSGHPFGPYAQ EVRQIAPTKLGRLKPQDSVRLAGFVTAVRTMMGKRGKIAFVSLEDLSGQIEIMVSGQTLE NCADYLKSDQVLIIESKVSRDDYGGGDGLRIMANQVMTLQMARERYARSLSLALAPGHDI ERLAAILTAHRLPDTSHIPLQLSYSNDKASGRFQVPPKWMVTPSADLFGELEALLGSKSV RVNW >gi|289656346|gb|ADEA01000021.1| GENE 66 78980 - 79213 488 77 aa, chain + ## HITS:1 COG:NMB1826 KEGG:ns NR:ns ## COG: NMB1826 COG2501 # Protein_GI_number: 15677662 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis MC58 # 1 76 47 122 123 136 97.0 8e-33 MEATVYLEDNEYIALCDLLKLAGLAESGGQAKAFIAEGLVLRNGETETRKTAKIRGGEVI EFDGTRLEIADGYDPEE >gi|289656346|gb|ADEA01000021.1| GENE 67 79191 - 79409 282 72 aa, chain + ## HITS:1 COG:no KEGG:NMA0634 NR:ns ## KEGG: NMA0634 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_A # Pathway: not_defined # 1 67 3 69 71 114 88.0 1e-24 MDTTLKNKAEALLGEPLLDEPVRPESWECCGSDCGDVCIQTVYWTEKARYDAQRRKLKEA GWSDDEDNEKAV >gi|289656346|gb|ADEA01000021.1| GENE 68 79702 - 80538 1304 278 aa, chain + ## HITS:1 COG:NMB1824 KEGG:ns NR:ns ## COG: NMB1824 COG0613 # Protein_GI_number: 15677660 # Func_class: R General function prediction only # Function: Predicted metal-dependent phosphoesterases (PHP family) # Organism: Neisseria meningitidis MC58 # 1 275 1 275 278 539 96.0 1e-153 MIDLHCHSTVSDGMLSPAEVVRLAHQNGCTLLALTDHDHTGGIAEARAEADAIGLRFVNG VEISVTWRGRTIHVVGLDFNEQDENLQNLLAQVRQGRLKRLEAIAAKLEKKGIGGAYDGA LTLAANKEMVSRTHIAEFLIQAGHVKNKQQAFTKYLGDGKSCAVRHEWATLADCVSAVNG AGGMAVIAHPMRYDLSATAKRNLFEEFKNLGGVGIEVHSGNCCKNDRLNYALLAERFGML ASAGSDFHRLNDFSGGILGACPELPENCKPVWAHFKPV >gi|289656346|gb|ADEA01000021.1| GENE 69 80616 - 81122 934 168 aa, chain - ## HITS:1 COG:NMA0463 KEGG:ns NR:ns ## COG: NMA0463 COG1854 # Protein_GI_number: 15793465 # Func_class: T Signal transduction mechanisms # Function: LuxS protein involved in autoinducer AI2 synthesis # Organism: Neisseria meningitidis Z2491 # 1 166 1 166 168 327 93.0 6e-90 MPLLDSFKVDHTRMHAPAVRVAKTMTTPKGDTITVFDLRFCVPNKEILSEKGIHTLEHLF AGFMRDHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWLASMQDVVNVKDQSKI PELNEYQCGTYLMHSLAEAQEIAQNVLARKVAVNKNEDLTLDDDFLKG >gi|289656346|gb|ADEA01000021.1| GENE 70 81177 - 81500 582 107 aa, chain - ## HITS:1 COG:NMA0466 KEGG:ns NR:ns ## COG: NMA0466 COG1965 # Protein_GI_number: 15793468 # Func_class: P Inorganic ion transport and metabolism # Function: Protein implicated in iron transport, frataxin homolog # Organism: Neisseria meningitidis Z2491 # 1 107 1 107 107 193 94.0 7e-50 MMTESEFIRMSEELFEHIEDQIDENGWDFDCQFAGNVLTIEAADGTQIIVNRHTPNQELW IAAKSGGYHFAEQNGKWLATRDGRDFYDVLNEALSAASGEAVEIAEL >gi|289656346|gb|ADEA01000021.1| GENE 71 81571 - 81753 234 60 aa, chain + ## HITS:1 COG:no KEGG:NMO_0186 NR:ns ## KEGG: NMO_0186 # Name: not_defined # Def: putative lipoprotein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 1 55 8 63 63 66 80.0 2e-10 MKYGVFFAAATALLLSACGYKGDLYLPKEGDKARFGVIQTGLPIHTPASQPEPDKAKAQP >gi|289656346|gb|ADEA01000021.1| GENE 72 81750 - 82970 1783 406 aa, chain + ## HITS:1 COG:NMA0468 KEGG:ns NR:ns ## COG: NMA0468 COG0019 # Protein_GI_number: 15793470 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate decarboxylase # Organism: Neisseria meningitidis Z2491 # 1 406 1 406 406 741 92.0 0 MTLHCEQVPYSRLAEEFGTPLYVYSQSALTEAFENYQTAFAALSPLVCYAVKANGNLSII KHFASLGSGFDIVSGGELARVLAAGGDAAKTIFSGVGKSEAEIEFALHAGVKCFNMESIP EIDRIQKVAERLGKTAYVSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAARQ SHLKIIGIDCHIGSQLTDLSPLIEACERILILVDRLADEGIVLEHLDLGGGVGIVYQDET VPDLGAYAQAVQKLIGTRRLKLILEPGRSLVGNAGSLLTRVEFVKHGEEKNFVMVDAAMN DLMRPALYDAYHHIEAVEPKNIPPLTADIVGPICETGDFLAKGRTLACEAGDLLVVRSAG AYGASMASNYNTRNRAAEVLVNGNESKLIRRRETWAQQMANELDCL >gi|289656346|gb|ADEA01000021.1| GENE 73 83040 - 83267 284 75 aa, chain - ## HITS:1 COG:NMA0371 KEGG:ns NR:ns ## COG: NMA0371 COG2900 # Protein_GI_number: 15793379 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 75 1 74 74 83 69.0 1e-16 MSAAGDLEHRITELEIQTALQEDLISSLNDTVAKMQQTLDLQQAQLRLLYQRMQDKGANG EREPYSLRDEVPPHY >gi|289656346|gb|ADEA01000021.1| GENE 74 83268 - 84638 2280 456 aa, chain - ## HITS:1 COG:NMA0370 KEGG:ns NR:ns ## COG: NMA0370 COG2056 # Protein_GI_number: 15793378 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Neisseria meningitidis Z2491 # 1 456 1 462 462 614 81.0 1e-175 MNAVVIAVIVMLALSLARVHVVLSLTVGAFAGGLLAGMPLTDVADAAGKVSQPGIITVFQ NGLSGGAKIALSYAMLGAFAMAITHSGLPQQLAGAVVRKLNRSGAESGTSMVKWLLLLVI LVMGVLSQNVVPIHIAFIPMVIPPLLLVFNRLQVDRRLIACVITFGLVTTYMFLPYGFGA IFLNEILLGNIRSAGMAVDGINVMEAMAIPALGMAAGLLLSFVHYRKPRVYQSNQIDTAD NRSAADQPEPSYYRSLVAGVAIAVCFAIQLVYNDALLLGAMLGFAVFMTLGVVKRHDAND VFGAGIKMMAMVGFIMIAAQGFAAVMQATGDIQPLVDGSMKMFGGSKGMAAFAMLLVGLL VTMGIGSSFSTLPIITAIYVPLCMSLGFSPLATVAIVGTAGALGDAGSPASDSTLGPTMG LNADGQHDHIRDSVVPTFIHYNIPLMVAGWIAAMVL >gi|289656346|gb|ADEA01000021.1| GENE 75 85030 - 85257 184 75 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298369662|ref|ZP_06980979.1| ## NR: gi|298369662|ref|ZP_06980979.1| hypothetical protein HMPREF9016_02103 [Neisseria sp. oral taxon 014 str. F0314] # 1 75 26 100 100 149 100.0 6e-35 MKKLNVFELKQVSGGDSGEVKHIGDLIPPSTAPKDFVISSEELERRIRIAGMNGVPEHPI TYEALKNGFQIPFYR >gi|289656346|gb|ADEA01000021.1| GENE 76 85275 - 85460 336 61 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298369663|ref|ZP_06980980.1| ## NR: gi|298369663|ref|ZP_06980980.1| hypothetical protein HMPREF9016_02104 [Neisseria sp. oral taxon 014 str. F0314] # 1 61 1 61 61 114 100.0 3e-24 MKKLNVFELKQVSGGDSGEVKHISDLIAPAPRDFVISLEEFERRMRDAGRVRIPEDPGMY I >gi|289656346|gb|ADEA01000021.1| GENE 77 85794 - 86183 693 129 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298369664|ref|ZP_06980981.1| ## NR: gi|298369664|ref|ZP_06980981.1| lipoprotein PG3 [Neisseria sp. oral taxon 014 str. F0314] # 1 122 1 122 129 150 100.0 2e-35 MTKKQLITALVAATLAFPAVTVQARGTDNQKKATLAGAAAGAALGGILGNDGQSMLIGAA AGGLAGNAYAYHNKKMNQKDAEIERRDRWYRDSRYYDDWYDHGRYKRHSHFRPKKRHWRD WDDWDDWDD >gi|289656346|gb|ADEA01000021.1| GENE 78 86421 - 87245 234 274 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169796031|ref|YP_001713824.1| putative adenine-specific methylase [Acinetobacter baumannii AYE] # 52 239 84 293 334 94 33 2e-18 MPTPDQWLRACPLPRNEARMLLQRALGCTRVQLLTQGGSEMSEHAAATAQELAHRRIQGE PMAYILGEREFYGRMFRVNPDVLIPRPETEHLVEAVLDRLPPQGRVWDLGTGSGAVAVSI ALERPDARVRASDISAAALHTAAQNAAALGADIEFALGSWFDTDRPSEKKSYDIIVSNPP YIEAGDAHLEQGDLRFEPQGALTDFSDGLSCIRALAAGSPAYLKNGGWLLLEHGCGQGAQ VRAVLAEHGFSRIDTLPDLAGLDRVTLGVFDHGN >gi|289656346|gb|ADEA01000021.1| GENE 79 87322 - 88206 1045 294 aa, chain - ## HITS:1 COG:PA2874 KEGG:ns NR:ns ## COG: PA2874 COG1721 # Protein_GI_number: 15598070 # Func_class: R General function prediction only # Function: Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) # Organism: Pseudomonas aeruginosa # 9 294 27 313 317 94 30.0 3e-19 MRDNEAAARRHIRTVPTRLGVGLLVMVALLWLVGLNYQANLAYIAAFWLLGFIIVAVLQN RAQLLGLRLEVKMPSEIFAGTPAEITLDAAGNTRRRRLWLARDDGDGWQPWHIPGGSAFA VLSLQAQMRGYLRLPLLRVAAAAPFGICTTECRWQWRSDKVVFPAPEAHDPPAGFHADEC GGVQAASARSSDDLSHLQAHQSGASLQHIAWKTYAKTGEMLDKKFEAAEAGGGSHIISYR DYPSAGREQLAALLCHRVLEAERRGIRYELELPGRTVAPQKSQREICLTALALW >gi|289656346|gb|ADEA01000021.1| GENE 80 88223 - 89131 990 302 aa, chain - ## HITS:1 COG:PAB0848 KEGG:ns NR:ns ## COG: PAB0848 COG0714 # Protein_GI_number: 14521486 # Func_class: R General function prediction only # Function: MoxR-like ATPases # Organism: Pyrococcus abyssi # 1 280 1 284 314 282 49.0 5e-76 MNHQIQHALQQLNGLILGKENVLRQIFAAVLAGGHVLLEDVPGVGKTTLSHGVAAVLGLD YRRVQFTNDMLPSDLLGVNVFRPNEGRFEFHSGPVFHAFLLADEINRASPKLQSALLEAM EERQVSVDGETYPLPQPFIVMATQNPTEQLGTFPLPESQLDRFMMRLSMGYPAAEAEKQL YLQGGSRSSAGSLQAVCDARQLQQWQQQVSQVMFAQAAADYVYRLVQATRQSGRFAAGLS PRAGLAVVGAAKAWAFMQGRGHVLPDDVKSVWVAVANHRVKPVQQGLTSAQVLTDLLNHV AV >gi|289656346|gb|ADEA01000021.1| GENE 81 89314 - 90714 2011 466 aa, chain + ## HITS:1 COG:NMA0184 KEGG:ns NR:ns ## COG: NMA0184 COG0790 # Protein_GI_number: 15793212 # Func_class: R General function prediction only # Function: FOG: TPR repeat, SEL1 subfamily # Organism: Neisseria meningitidis Z2491 # 4 464 3 457 468 323 49.0 4e-88 MANAASDSLFRQADQLLAQNPPDYGQALPLLQQAARQGHAEAAFQLAGIFLEQSEPDIEA AIPWLEIAAKQNHPYAVYNLLHLRERAGEPFSAFLSEYAWLGERGILAAQLRLLEYYADH HEPQAVYWARKAAGQGHPFGQYFLAQHYHFSGEADLTIARGLYHEAAEQGLSVAHWQLGK IYRKGMGTPPDLERAAFHLRQAAEQGFIGAQTMLADVLAEQGDPDALDWYKAAADQRDYD AVTALARHYLIGTLTERNQLKAVRYAETAAEYGHPEALSLMGDIYRYGLGVRPDHHTAQN YYRQAAEAGSLSACRKLLSDAALHDQDHYEDIKRTALILQHIEKTFQEALAYQEGIGRQQ DYTAARKLYLEAAEFHHSGAAAQLGVIYYYGQGVKYSPKEAAYWFETAAVQDNAMAQYHL ARMYYYGRGVPFNVATACRWLQAAIWNGYENPAAFKHLLAQWRRRM >gi|289656346|gb|ADEA01000021.1| GENE 82 90995 - 91117 134 40 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKELTVKELGQVAGGINWDSFGFLDWLDPDFSNPFSPLLL >gi|289656346|gb|ADEA01000021.1| GENE 83 91311 - 92198 1041 295 aa, chain - ## HITS:1 COG:NMB0440 KEGG:ns NR:ns ## COG: NMB0440 COG0287 # Protein_GI_number: 15676352 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydrogenase # Organism: Neisseria meningitidis MC58 # 7 289 4 286 290 390 69.0 1e-108 MNPPAALRQITLIGVGLIGGSFALDLKRLGLVEKVAGIDLSRSNLDRALERGVIDEAFDT VGEDNIAAADLVLIATPVSTLSAICRSIAPFLKAGTLVSDVGSTKQSALEAFRDCLPGHL PYCIAAHPIAGSDRSGALAAQFGLYQGKKLIITPHGREDSDGLCRLESLWQAVGAETYRM SAAEHDAVFAAVSHMPHLLAFAFVHQILDHPAGQTYLKFAATGFRDFTRIASSHPAIWTD ICMANKNSLLDLIGGLHAQLGVLKGILETGDRPALYRYLEEAKQTRDDWQANQPL >gi|289656346|gb|ADEA01000021.1| GENE 84 92340 - 93143 1047 267 aa, chain - ## HITS:1 COG:NMB1417 KEGG:ns NR:ns ## COG: NMB1417 COG3298 # Protein_GI_number: 15677276 # Func_class: L Replication, recombination and repair # Function: Predicted 3'-5' exonuclease related to the exonuclease domain of PolB # Organism: Neisseria meningitidis MC58 # 1 263 1 263 264 492 85.0 1e-139 MTPILAFDIETVPDVHGIRLLYDLPDNLPDSEAVMFAQQKRRAQTGGDFMQHHLHQVVAI SCCMRWGQDKIHVGTIGEMHDSEEVMIAKFFDLIETHTPQLVSWNGGGFDLPVLHYRSLI HGIAAARYWDTGEGDFGDSRDFKWNNYISRYHNRHCDLMDLLALYQPRASVPLDDMAKLC GFPGKLGMDGGKVWEAFHAGRLKDIRDYCETDAANTYLMYLRFRLMSGALDADEYEVEIK RLKNYLADQAKDKPHWAEFTRAWRQAV >gi|289656346|gb|ADEA01000021.1| GENE 85 93934 - 94803 1187 289 aa, chain - ## HITS:1 COG:NMB1418 KEGG:ns NR:ns ## COG: NMB1418 COG1560 # Protein_GI_number: 15677277 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lauroyl/myristoyl acyltransferase # Organism: Neisseria meningitidis MC58 # 1 289 1 289 289 467 77.0 1e-131 MKAAFFLLYLIQLLPFKAIHKIADAVGILAYYAVKPRRKVGETNLRKCFPEWSEDKRKAV LKRHFQHMAKLMLEYGLYWYAPAERLRKLVHYQDKHHLDNALAAGEKVILLYPHFTAFEM AVYTLNQDVPLTSMYSHQKNKALDEQILKGRHRYNNVFLIGRTEGLRAIIKQLRKSDAPF LYLPDQDFGRNDSIFVNFFGIPTATITGLSRIAGMTKAKVIPAIPTRNADNTVTLRFYPA WENFPSDDVAADTQRMNDFIEARARENPEQYFWLHKRFKTRPEGEQGFY >gi|289656346|gb|ADEA01000021.1| GENE 86 94927 - 95475 827 182 aa, chain - ## HITS:1 COG:NMA1631 KEGG:ns NR:ns ## COG: NMA1631 COG0817 # Protein_GI_number: 15794525 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, endonuclease subunit # Organism: Neisseria meningitidis Z2491 # 7 181 6 180 180 293 90.0 1e-79 MTRTPQTTRILGIDPGSRVTGFGVIDVCGREHFYVASGCIKTPPDAPLSERIAVIVRHIG EIVRLYRPQQAAVEQVFVNVNPASTLMLGQARGAALAALVMHELPVSEYTALQVKQAVVG KGKAAKEQVQHMVVQMLSLSGTPQSDAADGLAVALTHALRNHGLAAQLNPNGMKVKRGRF QW >gi|289656346|gb|ADEA01000021.1| GENE 87 95523 - 96362 1168 279 aa, chain - ## HITS:1 COG:NMB0441 KEGG:ns NR:ns ## COG: NMB0441 COG0388 # Protein_GI_number: 15676353 # Func_class: R General function prediction only # Function: Predicted amidohydrolase # Organism: Neisseria meningitidis MC58 # 1 278 1 270 270 444 78.0 1e-125 MQNIRAAAVQMISSTDPDANTAAMKRLVRQAAEQGADWVLLPEYWPLMGSNDTDKLAFSE PLVSGRLGETCYARFQTALSETAAECGVVLFGGTVPLQSPDAGKVMNTMLVYGRDGAQIG LYHKMHLFGFSGLGERYAEADTISAGGDVPELSADEVPLAAGICYDLRFPEFFRAQRPFD VLLLPAAFTYTTGSAHWELLLRARAVENQCYVVAAAQGGEHESGRRTFGHSMIIDPWGEV LAVLPEGEGVVVADLDGARLQSVRTRLPALKHRLLQTIL >gi|289656346|gb|ADEA01000021.1| GENE 88 96463 - 96777 470 104 aa, chain + ## HITS:1 COG:NMB2039 KEGG:ns NR:ns ## COG: NMB2039 COG3203 # Protein_GI_number: 15677862 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Neisseria meningitidis MC58 # 5 104 6 111 331 64 40.0 6e-11 MNKRLTLLLLALPAFASADVRLYGDLKSGVETSQTKFGGKTSSYTGVSDLGSHIGMRGSH PIGGGSSVIWQMEQDTPLGRDKSDRQSDLRRGRDGGEIYIGIGR >gi|289656346|gb|ADEA01000021.1| GENE 89 96853 - 97923 1422 356 aa, chain - ## HITS:1 COG:YPO0416 KEGG:ns NR:ns ## COG: YPO0416 COG0859 # Protein_GI_number: 16120749 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Yersinia pestis # 11 350 1 337 346 247 43.0 3e-65 MSISQPERVLIIKLRHHGDVLLSTPVVDALKHKFPDCEVDMLVYAATTDVILDNRQISNI FTIDREWKKQGIRAQLAHEKALFKRLKARNYDWAFNISDQWRAAFLAKLCAHYSAGIACC KRDNFLWRYCHDFLNEELDTSHHMVESNLNVLPPLVLPEEYPAKVRMEISPANRESVLEK LSAQGWNGEPYVLAHPGARWFFKCWEDGKNAALLQLLLLNGKNVVLTASPDAAEQEMVQS ILGRLKIPDGVHVWVLSGCLNLRELAAAIDGAELFFGVDSVPMHIAAALDKPQVALFGPS WVGRWRPYSDKAEVVWAGDFAELPHPDSINTNDATRLLGAIPLDVVWEKVRAKLGL >gi|289656346|gb|ADEA01000021.1| GENE 90 98415 - 99707 1897 430 aa, chain - ## HITS:1 COG:NMB1823 KEGG:ns NR:ns ## COG: NMB1823 COG3977 # Protein_GI_number: 15677659 # Func_class: E Amino acid transport and metabolism # Function: Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase # Organism: Neisseria meningitidis MC58 # 1 430 1 430 430 819 91.0 0 MQFSAFGEKFTQLSGILQLMDDLGDALKSDKPVNMLGGGNPARIAEVNAVFADVFSKLAA EHAVENIGNYSNPQGDAALIDALTAFLNREYGWHLTADNIALTNGSQNAFFYLFNLFGGK FNVSDGLSVEKAILLPLAPEYIGYADVHVEGQHFVSVKPKIEAVAHEGEAGFFKYRVDFD ALESLPELKEGKIGAICCSRPTNPTGNVLTDGEMAQLDALAQEHGIPLIIDNAYGMPFPN IIYSDVTLNWHENIILCFSLSKVGLPGVRTGIIVAAPEVVKAVSSLNAIVNLSPTRFGAA IATPLLQDGRLKQLSDDVIRPFYRNQAQTAVSLLKRELGAYPLKIHKPEGAIFLWLWFEN LPVSSQTLYEMLKAEGTLIIPGEHFFVGIDTQDYPHARECIRMSIAQDAQTLKKGIAAIG RVVRGLYGAV >gi|289656346|gb|ADEA01000021.1| GENE 91 99870 - 100094 160 74 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFSRTVVLKDRALRHDVFSYILRGLIVATFLISQCNNILEILAIAVTEVNYFICMLMLFS DILLLLFMKLRRNK >gi|289656346|gb|ADEA01000021.1| GENE 92 100091 - 103360 3107 1089 aa, chain + ## HITS:1 COG:NMA0631 KEGG:ns NR:ns ## COG: NMA0631 COG3513 # Protein_GI_number: 15793618 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 1089 1 1082 1082 1934 91.0 0 MTAFKPNPLNYILGLDIGIASVGWAMVEIDDKENPVRLIDLGVRVFERAEMPKTGDSLAA ARRLARSVRRLTRRRAHRLLRARRLLKHEGVLKPEDFDENGLVKPLPYIPKQPRNTPWQL RAAALDRKLTPLEWAAVLLHLVKHRGYLSQRKNEGETDDKELGALLKGVADNTHALQAGN FRTPAELALNKFEKESGHIRNQRGDYSHTFSRKDLQAELVLLFEKQKEFGNPYVSDDLKN GIENLLMTQRPALSGDAIQKMLGHCTFEPAEPKAAKNTYTAERFIWLTKLNNLRILNQGN ERPLTDAERTTLMDEPYKKSKLTYAQARKLLDLDDTAFFKGLRYGKDNAESATLMEMKAY HAISRALEKEGLKDKKSPLSLSPELQDEIGTAFSLFKTDEEITGRLKGCLQPEILDALLK HISFDKFVQISLKALRRIVPLMEQGKRYDEACAEIYGDHHGRRNSEETLYLPPIPADEIR NPVVLRALSQARKVINGVGRRYGSPARIHIETAREVGKSFKDRKEIEKRQEENRKDREKA AAEFQEYFPNFVGEPKSKDILKLRLYRQQNCKCLYSGKEINLGRLNEKGYVEIDHALPFS RTWDDSFNNKVLVLGSENQNKGNRTPYEYLNGKDNSREWQEFKARVETSRFPHSKKQRIL LQKFDEEGFKERNLNDTRYVNRFLCKFVADHMQLTGKGKRRVFASNGQITNLLRGFWGLR KVRAENDRHHALDAVVVACSTVAMQQRITRFVRYKEMNAFDGKTVDKETGEVLHQKTHFP QPWEFFAQEVMIRVFGKPDGKPELEEADTPEKLRALLAEKLSSRPEAVHEYVAPLFVSRA PNRKMSGQGHMETIKSPKRLDEGISVVRVPLTQLKLKDLEKMVNREREPKLYEALKARLE AHKDDPAKAFAEPFYKQDKAGNRTQQVKAVRIEQVQKTGVWVRNQNGIADNATMVRVDVF EKGGKYYLVPIYSWQVAKGILPDKAIIAFKDEEEWQLIDDSFNFKFPLHPNDLVEVITKK ARIFGYFASCHRGTGNINIRIHDLDNKVGKNGILEGIGVKTALSFQKYQIDELGKEIRPC RLKKRPPVR >gi|289656346|gb|ADEA01000021.1| GENE 93 103432 - 104346 991 304 aa, chain + ## HITS:1 COG:NMA0630 KEGG:ns NR:ns ## COG: NMA0630 COG1518 # Protein_GI_number: 15793617 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair # Organism: Neisseria meningitidis Z2491 # 1 304 1 304 304 481 83.0 1e-136 MTWRSLLIQNSGKLSLHRKQMLIRQNGESYTVPLEDIAVIVVEHRETLITAPLLSALAEY GTTLLTCDEQFLPCGQWLPYSQYHRQLKTLKQQLNISEPLKKQLWQHIVRRKILNQAFVA DETGNDIAAKRLRALAAEVRSGDTGNREAQAAALYFQAVFGEKFTRNDNNTVNASLNYAY AVIRAAVARSLALYGWLPALGLFHKSELNPFNLADDFIEPLRPLADLTILNLKEQGRLKS ELTPQTKQALIRILHSQVGIEQQTFSTLAAIDKMIASFQPSLAAKNAKLLKLPEILPLKE YQYE >gi|289656346|gb|ADEA01000021.1| GENE 94 104339 - 104665 394 108 aa, chain + ## HITS:1 COG:NMA0629 KEGG:ns NR:ns ## COG: NMA0629 COG3512 # Protein_GI_number: 15793616 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 108 1 108 108 187 94.0 3e-48 MSEAKFMRIIVFFDLPVTTVAKRKAANQFRHFLLKDGYQMLQLSVYSRIVKGRDALQKHH NRLCANLPQEGSIRCLEVTEKQFAAMKLLLGELKTQEKKVNSDQLLLF Prediction of potential genes in microbial genomes Time: Thu May 26 13:33:37 2011 Seq name: gi|289656345|gb|ADEA01000022.1| Neisseria sp. oral taxon 014 str. F0314 cont1.22, whole genome shotgun sequence Length of sequence - 38672 bp Number of predicted genes - 33, with homology - 33 Number of transcription units - 17, operones - 9 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 789 1001 ## COG1178 ABC-type Fe3+ transport system, permease component - Prom 835 - 894 2.4 - Term 867 - 911 3.0 2 2 Tu 1 . - CDS 931 - 1311 738 ## NGO1981 hypothetical protein - Prom 1379 - 1438 2.5 3 3 Op 1 2/0.000 - CDS 1452 - 2441 1199 ## COG3842 ABC-type spermidine/putrescine transport systems, ATPase components 4 3 Op 2 . - CDS 2444 - 3337 863 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - Prom 3364 - 3423 5.0 + Prom 3320 - 3379 2.8 5 4 Op 1 2/0.000 + CDS 3468 - 4055 808 ## COG0288 Carbonic anhydrase 6 4 Op 2 14/0.000 + CDS 4059 - 4667 1070 ## COG1057 Nicotinic acid mononucleotide adenylyltransferase + Term 4688 - 4750 21.1 7 4 Op 3 . + CDS 4792 - 5196 740 ## COG0799 Uncharacterized homolog of plant Iojap protein + Term 5218 - 5281 16.1 + Prom 5293 - 5352 6.6 8 5 Tu 1 . + CDS 5386 - 5748 746 ## gi|298369687|ref|ZP_06981004.1| serine/arginine repetitive matrix protein 2 + Term 5802 - 5844 10.1 - Term 5884 - 5941 17.0 9 6 Tu 1 . - CDS 5967 - 17525 14832 ## COG5295 Autotransporter adhesin - Term 18024 - 18062 -0.7 10 7 Tu 1 . - CDS 18171 - 19520 1738 ## COG0038 Chloride channel protein EriC - Term 19812 - 19857 13.7 11 8 Tu 1 . - CDS 19862 - 21082 1825 ## COG1364 N-acetylglutamate synthase (N-acetylornithine aminotransferase) - Prom 21304 - 21363 4.8 - Term 21344 - 21375 2.5 12 9 Op 1 . - CDS 21386 - 21604 365 ## NGK_1978 hypothetical protein 13 9 Op 2 . - CDS 21616 - 22326 231 ## PROTEIN SUPPORTED gi|167856514|ref|ZP_02479226.1| 50S ribosomal protein L1 - Prom 22401 - 22460 5.1 + Prom 22403 - 22462 8.1 14 10 Op 1 . + CDS 22505 - 24145 2520 ## COG0661 Predicted unusual protein kinase 15 10 Op 2 . + CDS 24300 - 25202 1390 ## COG1281 Disulfide bond chaperones of the HSP33 family + Term 25214 - 25271 8.7 + Prom 25389 - 25448 4.2 16 11 Op 1 . + CDS 25479 - 26279 333 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 17 11 Op 2 . + CDS 26306 - 26767 534 ## gi|298369696|ref|ZP_06981013.1| conserved hypothetical protein + Prom 26795 - 26854 2.6 18 12 Op 1 16/0.000 + CDS 26888 - 27664 1004 ## COG0767 ABC-type transport system involved in resistance to organic solvents, permease component 19 12 Op 2 13/0.000 + CDS 27670 - 28173 663 ## COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component 20 12 Op 3 10/0.000 + CDS 28207 - 28809 888 ## COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component 21 12 Op 4 3/0.000 + CDS 28806 - 29081 285 ## COG3113 Predicted NTP binding protein (contains STAS domain) 22 12 Op 5 . + CDS 29078 - 29929 1232 ## COG2853 Surface lipoprotein + Term 29952 - 29999 17.0 + Prom 30015 - 30074 3.2 23 13 Tu 1 . + CDS 30106 - 30768 865 ## COG0778 Nitroreductase 24 14 Op 1 . + CDS 30904 - 31266 798 ## NGK_2595 VacJ-related protein 25 14 Op 2 3/0.000 + CDS 31266 - 31652 614 ## COG0824 Predicted thioesterase 26 14 Op 3 . + CDS 31649 - 32137 790 ## COG0526 Thiol-disulfide isomerase and thioredoxins + Prom 32164 - 32223 1.5 27 15 Tu 1 . + CDS 32413 - 33564 880 ## PROTEIN SUPPORTED gi|149915191|ref|ZP_01903719.1| 50S ribosomal protein L27 + Prom 33637 - 33696 2.9 28 16 Op 1 . + CDS 33766 - 34539 864 ## NGO0007 putative type II restriction endonuclease + Term 34568 - 34615 8.1 29 16 Op 2 . + CDS 34624 - 34923 142 ## COG0863 DNA modification methylase 30 16 Op 3 . + CDS 34898 - 35683 357 ## MAE_18950 hypothetical protein 31 16 Op 4 . + CDS 35696 - 37117 2033 ## COG0215 Cysteinyl-tRNA synthetase + Prom 37163 - 37222 2.6 32 17 Op 1 1/0.000 + CDS 37276 - 37494 378 ## PROTEIN SUPPORTED gi|240079841|ref|ZP_04724384.1| 50S ribosomal protein L31 + Term 37496 - 37551 4.5 + Prom 37555 - 37614 4.8 33 17 Op 2 . + CDS 37655 - 38672 1382 ## COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family Predicted protein(s) >gi|289656345|gb|ADEA01000022.1| GENE 1 3 - 789 1001 262 aa, chain - ## HITS:1 COG:NMA0414 KEGG:ns NR:ns ## COG: NMA0414 COG1178 # Protein_GI_number: 15793419 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+ transport system, permease component # Organism: Neisseria meningitidis Z2491 # 1 260 18 276 530 309 74.0 3e-84 MNLRRLCTTLLLALVPLGFLAVMVVAPLFALAAYDSGGMVREILQDGYMRHRIGWTVFQA AVTCMLTVLAGVPTGWVLARLDFFGRGWILRLLMLPFVMPTLVAGMGVLALFGAHGALWA GWQDTPYLLLYGNVFFNLPVLVRSAYQGFMQVPEARLQTARTLGAGAWRRFTDVEWPVLR PWLAGGACLVFLYCFSGFGLALLLGGNRYATVEVEVYQLIAYELDMAQASVLVWLVLAVT AAAGLLYARLSRNAAAGKTVRV >gi|289656345|gb|ADEA01000022.1| GENE 2 931 - 1311 738 126 aa, chain - ## HITS:1 COG:no KEGG:NGO1981 NR:ns ## KEGG: NGO1981 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae # Pathway: not_defined # 1 126 63 186 186 171 71.0 7e-42 MKLLSAIVLASAVAVSGAAIAKPAKISNPTVAKKSVTYRCQQGKHVTVTYGFNKQGLTTS ASAVVDGKRRFMPIDLDRSDNADTYYGKEGGYVLSTAYMDKKTYRKQPIMITAPDDEIVL KDCSPR >gi|289656345|gb|ADEA01000022.1| GENE 3 1452 - 2441 1199 329 aa, chain - ## HITS:1 COG:NMB2042 KEGG:ns NR:ns ## COG: NMB2042 COG3842 # Protein_GI_number: 15677865 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport systems, ATPase components # Organism: Neisseria meningitidis MC58 # 1 318 1 311 312 334 56.0 2e-91 MLQLKNINKSFGTKQVAQNISLSVEGGGVLAVLGKSGCGKSTLLKIIAGLTPADGGEVWL NGRDITLMPSEKRNISLMFQDYALFPHLNAWQNAAFGLKMRKVPRKEAEQRARQALDEVG LGGEAERSVDSLSGGEQQRLALARALVTQPDLLLLDEAFSSLDTHLRRHLRDQTVRRIRR QNIPAILVTHDPEEAFTLADRIALMHAGRVLQYGAPRDLLQHPADAQAARLLGLQNISEE RYIPPQAITVCAAGSDSPAEGRIVCITDLPEARRLIFVHRRYGELTADLDRQQAGWLDSL PDNGRIGVAIDDRQIVRFAGQASTGGGAV >gi|289656345|gb|ADEA01000022.1| GENE 4 2444 - 3337 863 297 aa, chain - ## HITS:1 COG:NMA0394 KEGG:ns NR:ns ## COG: NMA0394 COG0494 # Protein_GI_number: 15793402 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Neisseria meningitidis Z2491 # 17 290 16 290 291 325 60.0 6e-89 MAERPCFSGVLDGSAHDGLWQWAQRQYGLKGSWQTLWLNGLPLGRLNPQWGAQLKKDWPG AVGEDSDGLHLAGESWAALGLSLQSTACGWREAGVLRGWRGEYFDVCDEAGRPLFALERA AFRPFGLLSRAIHLNGLTCRGGWRFWIGRRSADKAVDPNKLDNIVGGGVASGETALEAAL RESEEEAGLGAVLPDRMRRQSCLHSLRPVSRGLHNEILHIFDVVLPPDFAPKNQDGEVAG FVLMDVPELVGAMLAGEMMDDAQLVTLDAFRRYGLLKPQHPLSQWLESLRRHPQEAV >gi|289656345|gb|ADEA01000022.1| GENE 5 3468 - 4055 808 195 aa, chain + ## HITS:1 COG:NMA0415 KEGG:ns NR:ns ## COG: NMA0415 COG0288 # Protein_GI_number: 15793420 # Func_class: P Inorganic ion transport and metabolism # Function: Carbonic anhydrase # Organism: Neisseria meningitidis Z2491 # 1 195 1 196 199 323 80.0 1e-88 MSELESILSFNRQFVDSGEYEKFFTDKYPERGLAILSCMDARMMELLPRALGLKNGDAKL IKNAGAVVSHPWGSVMRSLLVAVFELKVREIMVIAHHDCGMQGLHAESFLNKVHDSDIPD DRIETLRHAGINLDGWLTGFDNVEDSVRHTVRLIRNHPLMPADIAVHGLVIHPTTGKLNM VVNGTLAQANLSDGL >gi|289656345|gb|ADEA01000022.1| GENE 6 4059 - 4667 1070 202 aa, chain + ## HITS:1 COG:NMB2024 KEGG:ns NR:ns ## COG: NMB2024 COG1057 # Protein_GI_number: 15677849 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid mononucleotide adenylyltransferase # Organism: Neisseria meningitidis MC58 # 1 201 1 199 201 314 77.0 5e-86 MKNIGLFGGTFDPVHNGHLHIARAFADETGLDTVVFLPAGDPYHKPQATQTSAAHRLAMT ELAAAEDARFAVSDCDIVRGGATYTFDTVQIFRQQFPAARLWWLLGSDSLMKLHTWKKWQ TLVKQTHIAVAMREGDSLGQTPRELHAWLGEALQNGSVRILQAPLYDISSTRIRQDIRNG SLPDGLIPPQVARYIREHGLYR >gi|289656345|gb|ADEA01000022.1| GENE 7 4792 - 5196 740 134 aa, chain + ## HITS:1 COG:NMA0417 KEGG:ns NR:ns ## COG: NMA0417 COG0799 # Protein_GI_number: 15793422 # Func_class: S Function unknown # Function: Uncharacterized homolog of plant Iojap protein # Organism: Neisseria meningitidis Z2491 # 5 133 1 128 128 207 88.0 4e-54 MEADMTEQELQDLQKMVETAVEALDDIKADNISVLETQDKTSLFSRMIIASGDSSRQVKA LANNVAVSLKEAGFEILSTEGQDSGEWALVDAGDLVVHVMLPAVRDYYDIDTLWGGEKPS FYAGAQKPWHAADN >gi|289656345|gb|ADEA01000022.1| GENE 8 5386 - 5748 746 120 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298369687|ref|ZP_06981004.1| ## NR: gi|298369687|ref|ZP_06981004.1| serine/arginine repetitive matrix protein 2 [Neisseria sp. oral taxon 014 str. F0314] # 33 92 59 118 146 92 100.0 9e-18 MKTSALLATLLAALALSACGDSSSGSGSASSAVCDEYEKAFAASVEGVDAATKEMMQKSF DQTKEALKNLPADQRDATCSESLKALKGEQAGAAEDKAEEAKEAAEEAKDAAADAKEDAQ >gi|289656345|gb|ADEA01000022.1| GENE 9 5967 - 17525 14832 3852 aa, chain - ## HITS:1 COG:XF1529 KEGG:ns NR:ns ## COG: XF1529 COG5295 # Protein_GI_number: 15838130 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Xylella fastidiosa 9a5c # 2608 3852 720 2059 2059 145 26.0 1e-33 MNKIFKIVWNRTIQSFVVTSELAKGHVKASSTVGGAAEEFRAAEQGRLKALFRLTALSMA LLGMSEGVWATITEKPATGGATFAIGNGTTSAHGSGAVAIGNNAQASNNGALAIGPNSGT STTIAASNNSTAIGVNIKATGQKAITIGADTSVNGQGSIGIGSNDAGRAAALGVQGAKSI GIGTHVLVRGDNIIAVGAEVVANKNNTVAIGYATQATAEQTVAIGSETKAEAQNAVVIGN RASVNADTAPADPNVSGTTTGAGSVAIGALSAASGTNATAIGQASNAYGQNSFSGGQNSQ ATGKSSVALGDGAMAKGNSSVAVGPYSQAPASGAATLGFNNRATGENSLAVGRQANAAKA NAIALGNEAKSLGEDAVAVGNNANAAQNRAMAFGKNSQALAGDAIAMGDSTVASGQNALA FGKSNKAEGKDAIAIGTNNNAWKVDSIAFGHSANADGEQAVAIGLNSHARQANAVALGQG ANADDTNALAIGTSSIAAQAAAIAIGNNARALKYSSIVIGEGAHSNNSRSVVIGYNASAI NPADSASNQDTNQTVAIGAFANAWGDQSTAIGNNVTAKGNSSIVIGSDDWDTVAEKQVED GSGKTVKEIYREYTGDEMATGKNSYIQPTSGEAAVAIGTKSQATGELSTAFGTGTSATGL ASAAFGMGARATKGNAVAIGAGSTTETDATGVRDANVNGVQYGNFAGGSRIIAGDQVSFG SAGYERQLKHIAPGAISETSTDAINGSQLYSVANVLATKIADASVKYYSVNPTEQDNTEG NRANDGATGTNAMAAGVAAAAAGDFSVAAGSNARANGHETVAIGHNTLASGVSAVAVGQR ANASGSEAVALGIDSNASGKFAIAIGNKATVSDSKLNGIAIGSGAVAAENYAMSMGLDTK ALGNSSIAFGNTAQATDSEALAIGHSAGALGANTVAFGVSATSNAAGAATVGAYTKAEAV NSTALGYASQAVNENDVALGAGSVTEAPHAGEYTLSNSYTAAGKDSYGVVSVGKTVGTKR QIQNVAAGVLSADSTDAVNGSQLYATNSYLLNLATATKNALGGETAVDGAGNLTVNNLGG TNQNTVHDALAALKTTADAANAAADKANTAIDGLNTSVGDIRNSINSLNQSVNTAKHHFY SVKSTDSTKGNYNNDGATGENALAAGVDALAEGINAVAIGQNVKAKGDQSISIGSTNEAS GESSTVIGRRGFVSGTNTHVLGNGNGAQGAPIAATQSTIIGNDNSINAVTNVHIQGNSNT VNRTHAIVMGSRNTVGGTGADNEEPAIAIGSENKVSISTDGSNTNTNASNAIAIGKQNIA NGDSSIAIGKLSQALKLSTVAIGNSAKALENNALAVGSYSKAGDYATAIGSTANAFGAQS VALGTGTLSGIRASTIGRYSAAHADSSVAIGSDSLVTQNAHASTAFGSGSVVSGAYSGVW SGAIQNAGTGARADRNVETRSVIGGTGNYAIGNKNIVGSQTSDTFVLGNDVKIGASAATL TTANWAANPSRDLPRSDTVTFAGEKNITGAVALGSGTSVTVSDGVALGRASKASVDKGAV GADPLGSAADKTIAAWKSTRAAVSVGDAEGNITRQITSLAAGTQDTDAVNVAQLKSAGFK LQTSQSEGEVAGSNVENVQNGETVTVDAGKNIKLTQAENKITVATKDEVAFNKVTVGDTV VDGRGVNITSAGGNSASLTSDGLRVGDVAVAAAGINAGNKAITNVAAGRVDANSTDAVNG SQLYSTQASLDNMGKTVAGVLGGNAKLNADGGITMSNIGGTGASTIEGAISALNTGAYKS FKLVTAATSGTNGQANNHSLKEITSGSTITLEAGKNIVLNQNESTVSINTADAPEFSGVV KAKGGLDMADNKITNVGRGDSATDAVNLGQLTDALNNLRVSTLTTVNNDAPFSYIGSDGK ILNRKVDVDPHGVKTVSFVHAEDGTPYTDTGNITIAALNPTDPQTSTPTALGNIKAGTKQ NDAVNVAQLDKLAKAAGTKVNPDGTITAPSYTVISGSPATAGVTTYDSADKAFSALSDAV RSPLNFAGDTGATATKQLGSTVTVKGGETDTDKLSDNNIGVVSDGQGTLDVKLAKALKGL DSAAFTDTSGNTTTVNAAGVTVGTAANPVKLTSDGLNNGGKTITSVAAGKNDTDAANVSQ LKPLAAALGAAFSNADGSIAAPTFNVTKSDGSSVAANTVQGALDNIGIELQKGLNITADK SNLANSETKDHVKPGEVVLYTSVDKNIVTTVSDNQIDFGLADKITVGKNAAKPITIDGTS GKISGLGDNLTTVAAGDASAAKPANINGSNAATVNDVLNAGWNLQGNSEAKDVVTAYDTV NFANGTGTTVSVESANGVSTVKVSVDAQNLAETAQHPVVYTDASGNRVYKQQDGSFRTGP NGQGNEIADTNVIASLQNAAGSTTDPFKLANVAEGKVAAGSKEAVNGSQLYNAAAKTAEV LGGSVDNDGNLVAPAYALVDGTPAEGKPAKTYNNVGTALNALNTAVTSPLTFGGDNDTAN FERKLGSRVFVKGGADAAELSEGNIGVVSNGSDTLNVKLAKELKELASAEFKDADGNTGK ISANGLTVTPSAASGKQPVSLTSDGLNNGGNKISKVAKGEADDDAVNKAQLDAAAAAATS KVASGHDNIVVETVNNSDGSTTYKVATAKDLKADSVTAGDTVLNNNGVKVGNNVALTSDG LKAGDVGVTAAGINAGNKAITNVAAGVNDTDAVNLGQLKQQLDASEKTTTVAAGKNVTVS SKVEGNNTEYTVNADKTTLSQAAGGAVKVNAGEKDGDGVTDYALDLTDEAKEDIAKGVAA KEAVDNKGLTFAGDSGSTGAKKLGDSLAVKGDDNITTKADADGVQVRLNRALNIDSVTAG DTVLNNNGVKVGSDVALTSDGLKAGDVGVTAAGINAGNKAVTNVAAGVNDTDAVNLGQLK QQLDASEKTTTVAAGKNVTVSSKVEGNNTEYTVNADKTTLSQAAGGAVKVNAGEKDGDGV TDYALDLTDEAKEDIAKGVAAKEAVDNKGLTFAGDSGSTGAKKLGDSLAVKGDDNITTKA DADGISVALNKTLTNLSSATFANVLGGNTVINGSGMTITPADGKQPVSLTSDGLNNGGNK ISKVAKGEADDDAVNKAQLDAAAAAATSKVASGHDNIVVETVNNSDGSTTYKVATAKDLK ADSYTAGNTVVNNDGVKVGSDVALTSDGLKAGDVGVTAAGINAGNKAITNVAAGVNDTDA VNLGQLNQKAAAAKTEVAGGTNIASVTSSQGGNGQTIYTVNADGASVSAGSSDIVVAKGA KDGNNVTDYAVDLAQNVKGDIAKGAAAKDIVDTKGLTFTGDSGSTGVKKLGDSVAVKGDA NITTKADAAGVQVSLNKDLNVNSVTAGNTVVDNGGVTVGSGNNAVSLTSGGLNNGGNKVT NVAAGTVSADSKDAVNGGQLHQLYQLIGSNGENHSTTKPTTDSSTGTSNVGNIKGITLVD NSQNGNVKNVTNQTTVAQSNGYTLVTYNVEGKGMYVTNDVIEAVGRINEQGIRFFHTNDG EVDPAVQATNTEDSSASGAYSTAVGYQAQASASDTLAIGRQSVSSGMNAIAIGKGAQATA ENTIAIGTGNIVSGKASGAIGDPSVVTGNSSYSVGNNNTVSANNAYALGSNITAGTADSV YLGDRATTSGVHTANTASGEAYTYGGLNDAAVAGKAGSNATANKVAGVVTVGNNADETRQ VQGVAAGVVSAASTDAINGSQLYYTNQAINQSINSINNYVANMGNQLNQRINDVESDSKA GTAAAMAVAGLPQAYLPGKSMMAVSGSAYRGESGYAVGFSSISDGGNWIIKGTATGNSRG HYGATAGVGYQW >gi|289656345|gb|ADEA01000022.1| GENE 10 18171 - 19520 1738 449 aa, chain - ## HITS:1 COG:NMA0434 KEGG:ns NR:ns ## COG: NMA0434 COG0038 # Protein_GI_number: 15793439 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Neisseria meningitidis Z2491 # 10 446 8 444 469 609 78.0 1e-174 MPLPRFIGLRIAHKLRQTRRLSRKTAAFAFLLAGSALVALVSLLFAHMADFALETNARLV RQYPWFAWVALPLGLPLIAWLTRCFAPYTAGSGIPQVLASLSLPYGVNKTRLIPFGRTLL KIPLTFIGMVCGASIGREGPSVQVGAAVMSAWGGWCKKHNLAFRGMQENDLIAAGAAGGL AAAFNAPLAGVVFAIEELGRGVMLRWERQILLGVLAAGFIQVAVQGNNPYFSGFHGGELD NMLLWVLGSGLVCGIAGGLFGQFLYKGAAAFSPQKWRGLIVRHPLLLAAAMGVLLALLGT VYQGQTYGTGYNEASGALRRMYDAPFGIAAAKWAATVFSYWAGIPGGIFTPSLTIGAMLG SHIAALVGLETGVNVVVLICMAAFLAGATQSPLTASVVVMEMTGGQNLLFWLLISAITAS QVSRQFSPKPFYHAAGVRFKQRLEKQDGN >gi|289656345|gb|ADEA01000022.1| GENE 11 19862 - 21082 1825 406 aa, chain - ## HITS:1 COG:NMA0435 KEGG:ns NR:ns ## COG: NMA0435 COG1364 # Protein_GI_number: 15793440 # Func_class: E Amino acid transport and metabolism # Function: N-acetylglutamate synthase (N-acetylornithine aminotransferase) # Organism: Neisseria meningitidis Z2491 # 1 406 1 406 406 597 79.0 1e-170 MAVRLTEKSPSELLSIDGVQVYVGQAGVKKADRDDLTLIVLNSQNTVGAVFTQNRFCAAP VYIAKSHLFDEDGVRALVINTGNANAGTGAQGRADAVEVCEAAARQVGCKPSQILPFSTG VILEPLPVQKIIGALPNVKPVHWSDAARAIMTTDTVSKAASREGKVGEKHTVRATGIAKG SGMIHPNMATMLAFIATDAKVSQPVLQLLTQEIADATFNTITVDGDTSTNDSFVIMATGK CGQMEIDNTADPRYGQLKELLGGIALELAQAIVRDGEGAGKFITIRVERAADREEARKVA YAVARSPLVKTAFSAGDPNLGRLLAAIGYAGIADLDVDRIRMWLGDVLVAEHGGRAESYT EEQGQAVMDEDEITVRIDLQRGKAEATVYTCDLTHEYISINADYRS >gi|289656345|gb|ADEA01000022.1| GENE 12 21386 - 21604 365 72 aa, chain - ## HITS:1 COG:no KEGG:NGK_1978 NR:ns ## KEGG: NGK_1978 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 1 71 1 71 72 123 88.0 2e-27 MSMPEMPKWYGDDGQIVSCTEKVKVMTENMTELYQLAQDAFEDALLMGCGEAQLREYLKA LIEAVENPYRKN >gi|289656345|gb|ADEA01000022.1| GENE 13 21616 - 22326 231 236 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167856514|ref|ZP_02479226.1| 50S ribosomal protein L1 [Haemophilus parasuis 29755] # 118 226 72 174 175 93 43 2e-18 MNRFVRLITMMVSACLLAAPIHADDLEKMLSNRQQVLNQFNGGNSTTPSSPATAPVTPAR PSYGSPITVQKLLVPSSSRAAAILNGQGQGGDIAPQAANYQRDGNADDLIRSAMGLLGVA YRWGGTSVRTGFDCSGFMQHIFRNSMGISLPRTSAMQAQMGTMVSRSELQPGDMVFFRTV RGRISHVGLFIGNNRFIHAPRTGKRIEITSLSNKYWNRKYAFGRRVKKNDPSRFLN >gi|289656345|gb|ADEA01000022.1| GENE 14 22505 - 24145 2520 546 aa, chain + ## HITS:1 COG:BH2708 KEGG:ns NR:ns ## COG: BH2708 COG0661 # Protein_GI_number: 15615271 # Func_class: R General function prediction only # Function: Predicted unusual protein kinase # Organism: Bacillus halodurans # 51 545 22 525 526 293 35.0 7e-79 MIPTLLAMRDISRMREIITVMTKYGLGGFLQRIKLSYGSADESASGSRYMSTPRRFRMAF EELGPTFVKLGQILSTRVDIFDAEWIEEFEKLQSNVAPIPVASIDELIESYLGRPMGEVF RSFDSVPVGSASIAQVHKAVLSDGETVAVKIKRPDIEPVIQADLRILTHLAGLIESEIPE VRRYQPVQMVQYFARSLAKETDLSVELRYMQRFGQTFDSDPFVRIPRVYPDISNRQILVQ EHIGDTLLKDIRIETLDAPMRTQLAARITDTLFTMILQQGFFHADPHPGNIFIGSDGRIT LIDFGLVGHLSSTRRREIVDLINALTRKDQFTMQYVLSNWAQGDLPDENLLGADVLEMLL NYEHTPVRDLRISQVINDITQIMRNHGLTLPGDLVMLFKTLITLEGVAKRLDGQTELLER AKPIVADAFKERSSPEHILRKGRMHLQTLLQAADELPQNLFRLSRRLQKGQMGITLDFKR FDQISHQIDRAANRLTMGIVTAALIIGSSIVMSIETGPKFIGFIGYLLAFANSLWIIWSI WRSGKH >gi|289656345|gb|ADEA01000022.1| GENE 15 24300 - 25202 1390 300 aa, chain + ## HITS:1 COG:NMA0441 KEGG:ns NR:ns ## COG: NMA0441 COG1281 # Protein_GI_number: 15793446 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Disulfide bond chaperones of the HSP33 family # Organism: Neisseria meningitidis Z2491 # 8 293 35 320 328 455 81.0 1e-128 MTQRTPAADSRTRFIFDDMPVRGLHVRLENVWRHIAGQKPYPAAIRRALGELLAAGVLLS SNLKTDGTLTVQVQGQGRLKMLVVEATSEHTVRATARWSEQAEISADESLADLLGDNGIF ALTLQPKDGEQWQGIVPLEGGSIAHMLMNYMKRSEQLDTHIALSASDDACGGLLVQRLPE EETDGDAWAHVGTLAQTATAEELVSLDAHHLLYRLFHETPPRVFEPEQIEFSCTCSRGKV SDMLLMLGAAEVGGVVAEQGSIEADCDFCHAKYVFDETDVNALFGADIVDTARQEIRRLQ >gi|289656345|gb|ADEA01000022.1| GENE 16 25479 - 26279 333 266 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 7 236 2 230 245 132 33 2e-30 MSTTPFIELKNVVFAYGDRPILHDINFTVEQGNFAAIMGGSGSGKTTLMRLITGQIHPQQ GQVLIEGRDVARFSDAELYEHRRRMGVLFQHGALFTDLSVYDNIAFPMRELTGLPEDVIR DLVVLKLNAVGLRGVERLMPSELSGGMSRRVALARTIALDPEIMLYDEPFTGLDPISLGV IAHLISRVNKALRSTSIMVTHDIEKSLEIVNQVIFLAHGEIMFSGSPQEMRELDSPWVRQ FIGGLADGPVAFRYPAQTTLQQDLMG >gi|289656345|gb|ADEA01000022.1| GENE 17 26306 - 26767 534 153 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298369696|ref|ZP_06981013.1| ## NR: gi|298369696|ref|ZP_06981013.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 153 1 153 153 226 100.0 3e-58 MKTDRLPLLILALADIAGLVYAVYGFARAGTFVLTFLAERVSEAAASFSFDDFGLSILFL ITPLSSLLLYCLLPVSAYGLARGRTWVRWVVQAQLPLRLLDTSPTVPVAETALAERLAAP LPELWQTDAVLALLALAETGKAVWVFYLVRRQK >gi|289656345|gb|ADEA01000022.1| GENE 18 26888 - 27664 1004 258 aa, chain + ## HITS:1 COG:NMA0486 KEGG:ns NR:ns ## COG: NMA0486 COG0767 # Protein_GI_number: 15793485 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: ABC-type transport system involved in resistance to organic solvents, permease component # Organism: Neisseria meningitidis Z2491 # 1 258 1 258 258 403 90.0 1e-112 MNFIRTVGAKTLDFIQSLGSITLFLLRILTKSATAFTRPRLSIRQVYFSGVMSVLIIAVS GLFVGMVLGLQGYTQLAKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAMTSEIGL MKTTEQLEAMNVMAVDPVARVVAPRFWAGVFSMPLLASIFNVAGIYGAYLVGVQWLGLDG GIFWAQMQNNISFGYDVANGLIKSAAFGTAVTLIAVHQGFHCVPTSEGILRASTRTVVSS ALTILAVDFVLTAWMFTE >gi|289656345|gb|ADEA01000022.1| GENE 19 27670 - 28173 663 167 aa, chain + ## HITS:1 COG:NMA0487 KEGG:ns NR:ns ## COG: NMA0487 COG1463 # Protein_GI_number: 15793486 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: ABC-type transport system involved in resistance to organic solvents, periplasmic component # Organism: Neisseria meningitidis Z2491 # 1 163 1 164 164 222 80.0 2e-58 MKKSILEFWVGLFVLLGAVAVGFLAFRVAGGTAISGSSGKSYTVYAEFSDIGGLKTNAPV KSAGVLVGRVASISLDPKTYQAKVSLNLNSQYKFSSDVSAQILTSGLLGEQYIGLQQGGD TEDLAAGDTISVTSSAMVLENLIGKFMTNFAEKNAGDSKKAADSAAE >gi|289656345|gb|ADEA01000022.1| GENE 20 28207 - 28809 888 200 aa, chain + ## HITS:1 COG:NMB1963 KEGG:ns NR:ns ## COG: NMB1963 COG2854 # Protein_GI_number: 15677793 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: ABC-type transport system involved in resistance to organic solvents, auxiliary component # Organism: Neisseria meningitidis MC58 # 1 196 1 196 196 289 77.0 3e-78 MKKISFISAVSIGLLSISLAAASPSDAVGQIRQNATQVLSILKGGDADGARRKAEAYALP YFDFQRMTALAVGNPWRQATDMQKQALTREFQTLLIRTYSGTMLQFKNAKVNVKDNPVVN KGGKEIVVRVEVSNSGEKPVNMDFSTYQSGSRYRVYNVAVEGASLVTVYRGQFNETVKNK GIDGLIDELKTKNSGKASKS >gi|289656345|gb|ADEA01000022.1| GENE 21 28806 - 29081 285 91 aa, chain + ## HITS:1 COG:NMA0489 KEGG:ns NR:ns ## COG: NMA0489 COG3113 # Protein_GI_number: 15793488 # Func_class: R General function prediction only # Function: Predicted NTP binding protein (contains STAS domain) # Organism: Neisseria meningitidis Z2491 # 1 91 9 100 100 112 60.0 2e-25 MNSETRDGTLYLSGDITVKTVTAAAFAGFGRQCRLKDIRILDLAEVGRADSACVSLLLTA LRANGSLEIRNLPQSVQALAELYEIREWVHS >gi|289656345|gb|ADEA01000022.1| GENE 22 29078 - 29929 1232 283 aa, chain + ## HITS:1 COG:NMB1961 KEGG:ns NR:ns ## COG: NMB1961 COG2853 # Protein_GI_number: 15677791 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Surface lipoprotein # Organism: Neisseria meningitidis MC58 # 1 267 1 266 275 340 67.0 2e-93 MKKTAATLLSLTLLSALPASAAERNSADPYEPYNRFVFNINDKADHYVLAPVARGYRKVT PKPVRAGVSNFFNNLRDVVSFGSNVLRLDAKRASEDFVRVGINTTFGLGGLIDVAGAGGI PNNKNTLGDTLASWGWKNSNYFVVPLLGPSTVRDTTGSIITTVYPVKNAVFHTSAGRWST TGLNAVNNREGLLNLTDSLEGAALDKYSYTRDLYMRMRARQTGGTLPQTPDDDIDIDELV DSGKPDNLSPAETADTPQTASAPVAEEWVRIRPEGGSNAGQVQ >gi|289656345|gb|ADEA01000022.1| GENE 23 30106 - 30768 865 220 aa, chain + ## HITS:1 COG:PM1832 KEGG:ns NR:ns ## COG: PM1832 COG0778 # Protein_GI_number: 15603697 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Pasteurella multocida # 1 219 1 221 222 282 59.0 4e-76 MFADKQTVLNAFNFRHACKSYDASKKISAEDFDFILESARLSPSSFGLEPWRFLVIQNPE LRGEIRDISWGASKIMDCSHFVILLARTQQAMQADYQRRIWGGVHHIPPETIEIMEKFFK NFSERDFAITENPRTFHDWACKQTYIALANMMTAAALIGIDSTPVEGFQLDKANSLLAEK GLMDPDEYRISVMVAFGYRSREPKRAKTRQAAADIIQWVE >gi|289656345|gb|ADEA01000022.1| GENE 24 30904 - 31266 798 120 aa, chain + ## HITS:1 COG:no KEGG:NGK_2595 NR:ns ## KEGG: NGK_2595 # Name: not_defined # Def: VacJ-related protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 1 120 318 437 437 248 96.0 5e-65 MYEVNRSVFLLIPLEPFWNWLQSLPGNHLDGLTLEDIQADANSYLVRPCETADEVWDEIE TRFEDIFAAELADWCEDEREWPDLDADIFNEWFDIQLSTVITDLEHEPLAREAFQPINLN >gi|289656345|gb|ADEA01000022.1| GENE 25 31266 - 31652 614 128 aa, chain + ## HITS:1 COG:NMA0492 KEGG:ns NR:ns ## COG: NMA0492 COG0824 # Protein_GI_number: 15793491 # Func_class: R General function prediction only # Function: Predicted thioesterase # Organism: Neisseria meningitidis Z2491 # 1 126 1 126 127 167 65.0 4e-42 MNVRVRNYHLDGYGHVNNARYLEFLEEARWTFFEQHGLLSALKGIMLVVARADIRYRRPA VEGDELRFEGRLKEMTSRHIVLTQTIILPNGKNAVEAEITMMAVNAANGRSISIPAPLST ALKTIAAE >gi|289656345|gb|ADEA01000022.1| GENE 26 31649 - 32137 790 162 aa, chain + ## HITS:1 COG:NMA0493 KEGG:ns NR:ns ## COG: NMA0493 COG0526 # Protein_GI_number: 15793492 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Neisseria meningitidis Z2491 # 1 162 1 162 162 249 74.0 1e-66 MKKLLSLAAVAVIGTLLALVLIPENKTAPAFSLTDLQGKPVSDADLRGKVSFINFWFPSC PGCVSEMPKVIKMAKDYRGKDFQVLGIAQPIDPPESVNQYVREYGLPFTVMFDGNKAAAQ AFGTQVYPTSFLINKKGEILKTFVGEPDFAALYQEIDKELAK >gi|289656345|gb|ADEA01000022.1| GENE 27 32413 - 33564 880 383 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915191|ref|ZP_01903719.1| 50S ribosomal protein L27 [Roseobacter sp. AzwK-3b] # 1 362 1 344 345 343 50 9e-94 MKFIDEAKIEVAAGKGGNGATSFRREKFVPRGGPDGGDGGKGGSVWAEADENTNTLVEYR FVKRYQAKNGEKGHGSDRYGAGADDIVLKMPVGTLIRDLDTDEIVADLTHHGQRVCLAKG GKGGLGNIHFKSSVNRAPKQSTPGEEGETRSLQLELKVLADVGLLGMPNAGKSTLITAVS AARPKIANYPFTTLHPNLGVVRIDENHSFVMADIPGLIEGAAEGAGLGHRFLKHLSRTGL LLHVVDLAPFDETVNPAEETLAIINELRKYDEELYGKPRWLVLNKLDMLDEEEAQTRTAA FLEAIGWDYPQPDDRFDFDMTTPRLFKISALTHQGTQELVHQIGRYLEEKKRIEAEKAEA EQAANAEIAEQQPKTDTGVFKPE >gi|289656345|gb|ADEA01000022.1| GENE 28 33766 - 34539 864 257 aa, chain + ## HITS:1 COG:no KEGG:NGO0007 NR:ns ## KEGG: NGO0007 # Name: not_defined # Def: putative type II restriction endonuclease # Organism: N.gonorrhoeae # Pathway: Mismatch repair [PATH:ngo03430] # 1 252 1 252 309 404 73.0 1e-111 MQLYFDTALPNGYRSQSQQIRVLTETWMERNGYCPCCGNKPIKKFTNNKPVADFFCPQCS EEYELKSKKQNTIGKTVPDGAYRTMLERIQSDTNPNFFFLAYKKADYSVQQLMLVPKHFI TADMIVPRKKGIPNRPDYIMCSMNIASLPESGKILLIDKAKTIEPETVLKQWQANLFLRG QKVEKKGWLLAIMKCIDKLPEKFTLAQMYEFETQLSIQFPENNHIKDKIRQQLQILRDQN MIEFVGRGIYRKVTISL >gi|289656345|gb|ADEA01000022.1| GENE 29 34624 - 34923 142 99 aa, chain + ## HITS:1 COG:CC0378 KEGG:ns NR:ns ## COG: CC0378 COG0863 # Protein_GI_number: 16124633 # Func_class: L Replication, recombination and repair # Function: DNA modification methylase # Organism: Caulobacter vibrioides # 1 90 156 250 358 90 48.0 8e-19 MKTQNDGKQMKCVWTFTPPNKTEKTFGKHPTQKPLALLKRCILAASNTGDLIFDPFMGSG TTGVAALKYGRKFCGCEQETEFFELAKKRLENGFQYCME >gi|289656345|gb|ADEA01000022.1| GENE 30 34898 - 35683 357 261 aa, chain + ## HITS:1 COG:no KEGG:MAE_18950 NR:ns ## KEGG: MAE_18950 # Name: not_defined # Def: hypothetical protein # Organism: M.aeruginosa # Pathway: not_defined # 6 257 11 257 258 276 55.0 4e-73 MASSIAWNKIFDDLDLHNHDFDVAPAEITAAQIKQACQGFTRVTDKEVYRLCKQYSREDH PQVFKDKGLFILPKRNGSYYIVKGEGYVDIPNITDEVQDYHSTLDFELKSSVVGDSEMQH VDFAYANSLIRTFMNDPSLVLTIRGRKYSPDFRCKVQNFELHISSIQTEVDAGYEGRDSI VLVEAKNSSTSNIIIRQLYFPYRQWTEQVKGKTVHTLFFEKRLIGGELIYYIWQFGFRDV NDYNSIELNRSARYRIIQNPQ >gi|289656345|gb|ADEA01000022.1| GENE 31 35696 - 37117 2033 473 aa, chain + ## HITS:1 COG:NMA0347 KEGG:ns NR:ns ## COG: NMA0347 COG0215 # Protein_GI_number: 15793358 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Cysteinyl-tRNA synthetase # Organism: Neisseria meningitidis Z2491 # 1 473 227 699 699 981 97.0 0 MTTIYNTLTRQKEPFTPINPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYP LTYVRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQ MIAMIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPLD FVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIA QSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQY DPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAVAFELSENANDYTRRF YAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGGIIGLLQRDPTEFLQGGAVS DGLSNEEIEDLIARRKQARSDKNWAESDRIRDLLNEHKIILEDNAGGTTWRRG >gi|289656345|gb|ADEA01000022.1| GENE 32 37276 - 37494 378 72 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|240079841|ref|ZP_04724384.1| 50S ribosomal protein L31 [Neisseria gonorrhoeae FA19] # 1 71 1 71 71 150 94 1e-35 MKQGIHPNYHEISVTCSCGNKFTTKSAMEKENFTIEVCSLCHPFYTGTQKIVDTTGRVDK FNNKFGNLFKRG >gi|289656345|gb|ADEA01000022.1| GENE 33 37655 - 38672 1382 339 aa, chain + ## HITS:1 COG:NMA0497 KEGG:ns NR:ns ## COG: NMA0497 COG1807 # Protein_GI_number: 15793496 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family # Organism: Neisseria meningitidis Z2491 # 1 339 1 339 558 373 60.0 1e-103 MLTYTPPDSRKPAKTHEKPWLLLLMVFAWLWPGVFSHDLWNPAEPVVFTALEALRHGASP LVADVLGQADFKIPPVYLWTAAAFQNLLSPWAADAYSAARFASVFFTAAGLACCGFAGFN LLGRHHGRSVVLILAGCVGLLSMAHFLSGLSVTFAALSMILCGFSLAHKKVITGALLLGG GWALLSLSAGFLLTAVLVLTALLLPLHPQWRFKRYALTLVGAFAVGLPLMVVYPFLLHRL QPAAFDLWLNTRSLGAFGGLADFQTAFNLPYYLKNLIWFAFPAWPLMAWTYTRIRIGAQR WSVLGTAWIGAAAVLLAVNPETYQDHLVWLLPPMALLGA Prediction of potential genes in microbial genomes Time: Thu May 26 13:34:13 2011 Seq name: gi|289656344|gb|ADEA01000023.1| Neisseria sp. oral taxon 014 str. F0314 cont1.23, whole genome shotgun sequence Length of sequence - 28466 bp Number of predicted genes - 24, with homology - 23 Number of transcription units - 12, operones - 7 average op.length - 2.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 57 - 635 880 ## COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - Term 651 - 688 3.0 2 2 Tu 1 . - CDS 806 - 907 92 ## - Prom 1093 - 1152 1.8 + Prom 782 - 841 5.3 3 3 Op 1 . + CDS 943 - 3732 4065 ## COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains 4 3 Op 2 . + CDS 3791 - 4666 165 ## Bamb_2418 putative CheA signal transduction histidine kinases 5 3 Op 3 . + CDS 4660 - 4956 161 ## gi|298369716|ref|ZP_06981033.1| conserved hypothetical protein + Term 4978 - 5008 0.7 6 4 Tu 1 . + CDS 5300 - 5440 160 ## COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains + Prom 5449 - 5508 4.7 7 5 Op 1 . + CDS 5550 - 6182 722 ## COG2323 Predicted membrane protein 8 5 Op 2 . + CDS 6267 - 7112 958 ## COG0668 Small-conductance mechanosensitive channel + Term 7213 - 7266 15.5 - Term 7559 - 7589 3.0 9 6 Op 1 23/0.000 - CDS 7648 - 8343 1144 ## COG1346 Putative effector of murein hydrolase 10 6 Op 2 . - CDS 8356 - 8748 491 ## COG1380 Putative effector of murein hydrolase LrgA - Prom 8814 - 8873 4.5 + Prom 8795 - 8854 3.5 11 7 Tu 1 . + CDS 8886 - 9776 1389 ## COG0583 Transcriptional regulator - Term 10032 - 10081 12.1 12 8 Op 1 11/0.000 - CDS 10100 - 10765 1147 ## COG0637 Predicted phosphatase/phosphohexomutase 13 8 Op 2 2/0.333 - CDS 10778 - 13036 3695 ## COG1554 Trehalose and maltose hydrolases (possible phosphorylases) 14 8 Op 3 2/0.333 - CDS 13116 - 14123 1401 ## COG2017 Galactose mutarotase and related enzymes 15 8 Op 4 1/0.667 - CDS 14127 - 15482 1905 ## COG0477 Permeases of the major facilitator superfamily - Prom 15518 - 15577 3.1 - Term 15861 - 15905 13.2 16 9 Op 1 . - CDS 15955 - 17034 1615 ## COG0489 ATPases involved in chromosome partitioning - Prom 17075 - 17134 3.2 - Term 17115 - 17151 6.3 17 9 Op 2 . - CDS 17179 - 18138 1251 ## COG0039 Malate/lactate dehydrogenases - Prom 18177 - 18236 2.8 - Term 18410 - 18453 11.7 18 10 Op 1 18/0.000 - CDS 18467 - 20101 2007 ## COG0706 Preprotein translocase subunit YidC - Prom 20156 - 20215 4.2 19 10 Op 2 16/0.000 - CDS 20370 - 20588 226 ## COG0759 Uncharacterized conserved protein 20 10 Op 3 . - CDS 20588 - 20926 172 ## COG0594 RNase P protein component 21 10 Op 4 . - CDS 20929 - 21063 218 ## PROTEIN SUPPORTED gi|15677735|ref|NP_274898.1| 50S ribosomal protein L34 - Prom 21277 - 21336 5.4 + Prom 21194 - 21253 4.9 22 11 Op 1 16/0.000 + CDS 21354 - 22868 2091 ## COG0593 ATPase involved in DNA replication initiation 23 11 Op 2 . + CDS 22957 - 24060 1592 ## COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) + Term 24076 - 24120 11.5 + Prom 24365 - 24424 13.0 24 12 Tu 1 . + CDS 24497 - 28417 1974 ## COG3419 Tfp pilus assembly protein, tip-associated adhesin PilY1 Predicted protein(s) >gi|289656344|gb|ADEA01000023.1| GENE 1 57 - 635 880 192 aa, chain + ## HITS:1 COG:NMA0497 KEGG:ns NR:ns ## COG: NMA0497 COG1807 # Protein_GI_number: 15793496 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family # Organism: Neisseria meningitidis Z2491 # 1 192 359 550 558 286 75.0 2e-77 MTFGFLAVFLWIGFFAMNYGWPAKLAERAAYFSPYYVPDIDPAPMAVALLFTPLWLWAIT RKNIRGRQAVTNWAAGVTLAWALLMTLFLPWLDAAKSHAPVVHQMEAALAPELKQRFSDG LECISVAAADHRARIAWTQYGSLKLNVDNPACRYRLVQQPKNTAPPQGWTQIWQGARPRN KVEGFALLEKAG >gi|289656344|gb|ADEA01000023.1| GENE 2 806 - 907 92 33 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDYKGKDKGPFFQGILACEKKMNAYYGYKLEFI >gi|289656344|gb|ADEA01000023.1| GENE 3 943 - 3732 4065 929 aa, chain + ## HITS:1 COG:NMA0462_2 KEGG:ns NR:ns ## COG: NMA0462_2 COG0749 # Protein_GI_number: 15793464 # Func_class: L Replication, recombination and repair # Function: DNA polymerase I - 3'-5' exonuclease and polymerase domains # Organism: Neisseria meningitidis Z2491 # 299 929 1 638 638 1140 93.0 0 MSKPTLLLVDGSSYLYRAYHAMAQLSAPDGAPTGALYGVLNMLRRLRADYVHDYCAVVFD AKGKNFRHEMFPDYKATRPPMPDDLRPQAEALPDLVRLMGWPVLVIPQVEADDVIGTLAA MAGEAGWNVVVSTGDKDMAQLVNERVTLVNTMSGETLDIEGVKEKFGVRPDQIRDYLALM GDKVDNVPGVEKCGPKTAVKWLEAYGSLAGVVEHAAEIKGKVGENLQAALPQLPLSYDLV TIKTDVDLHTELSDGLESLRRTSPKWSQLAVDFKRWGFRTWLKEAESRMHEAADGDLFGS DTIGEQAALDMETSSEKIIEHAPAPEKLDYQAVTTEAQFAALLDKLAQADKIGIDTETTS LDAMNAALVGISIAFQAGKAVYIPVGHSLTAAPEQLDLQYVLGYLKPHLENPALKKIGQN LKYDQHVFANYGIALNGIAGDAMLASYIIESHLGHGLDELSERWLGLETITYESLCGKGA KQIGFADVAIGQATEYAAQDADFALRLEAHLRAQMDAKQLEMYEKMELPVAQVLFEMERN GVQIDRAELARQSAELGAELMKLEQEAYAAAGQPFNLNSPKQLQEILFDKMGIPTKGLKK TAKGGISTNEAVLEQLAPDYPLPKIILQNRSLAKLKSTYTDKLPEMISPKDGRVHTTYAQ AVAITGRLASNNPNLQNIPIRTAEGRRVRRAFTAPQGSVIVSADYSQIELRIMAHLSGDK TLIAAFQNGEDVHRRTAAEVFGIAPENVSPEQRRYAKTINFGLIYGMGQYGLAKSLGIDN LSAKTFIDRYFARYPGVAEYMQRTKEQAAAQGFVETLFGRRLYLPDIRNKNANARAGAER AAINAPMQGTASDLIKRAMIDVSRWLVSDDLKSKLIMQVHDELVLEVPEAELDSVKEKLP QIMAKVDDGMLKVPLVAEVGVGMNWEEAH >gi|289656344|gb|ADEA01000023.1| GENE 4 3791 - 4666 165 291 aa, chain + ## HITS:1 COG:no KEGG:Bamb_2418 NR:ns ## KEGG: Bamb_2418 # Name: not_defined # Def: putative CheA signal transduction histidine kinases # Organism: B.cepacia # Pathway: not_defined # 4 291 45 334 334 218 39.0 2e-55 MAKIKLPKRLNIISIDEIIPYLLDKKLNPSHKEVKYDCSALDWIDPIGMTVFFNLVKKLQ SLNVKQSITGLTNSHRDPLKFMDDSNFFKEILGEALREDACPRDTTIPIRMVEHKESYYW VENSCINWIAKRINRSPESLAELKLCLYELFNNIKDHSSVNSGCIFTQYYPRKDTVSIAL ADFGVGIPHKVRTVCPNMKNDAEAIKKAMEEGFTTKSSHRNRGVGLHFLAQTVANNEGTL TIRSGYGKILHHKDGTSPFQMEQHYPGTAFLIELSTSKFDNSLTFEEDFEW >gi|289656344|gb|ADEA01000023.1| GENE 5 4660 - 4956 161 98 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298369716|ref|ZP_06981033.1| ## NR: gi|298369716|ref|ZP_06981033.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 98 1 98 98 174 100.0 1e-42 MVTISVASKVKEAYTYENGRTVFNAINNEFEKGNDVELSFDGFTVIPSSFANGCFVVLLE KYGFDRIKQNLKIIHSTKQINQMIKSRLEFENVRINQM >gi|289656344|gb|ADEA01000023.1| GENE 6 5300 - 5440 160 46 aa, chain + ## HITS:1 COG:NMA0462_2 KEGG:ns NR:ns ## COG: NMA0462_2 COG0749 # Protein_GI_number: 15793464 # Func_class: L Replication, recombination and repair # Function: DNA polymerase I - 3'-5' exonuclease and polymerase domains # Organism: Neisseria meningitidis Z2491 # 1 46 593 638 638 69 78.0 1e-12 MLEVPKAELDLVKEILPQIMAKVDEGKLKVPLVAEVGVGMNWEEAH >gi|289656344|gb|ADEA01000023.1| GENE 7 5550 - 6182 722 210 aa, chain + ## HITS:1 COG:FN0036 KEGG:ns NR:ns ## COG: FN0036 COG2323 # Protein_GI_number: 19703388 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Fusobacterium nucleatum # 3 208 5 210 210 233 59.0 2e-61 MFYIIVAVKLILGLLALVLVINLTGKGNLAPASASDQVQNYVLGGIVGGVIYNTDISIPV FMLILAIWFAAVLSLRWLKKHNNLVKRLVDGRPVMLISHGKIDVDAVRKVGISANDLSFK LRMQGIYAVKDVKQAILEQDGQLIITSFGEENPKYPLITDGSIQPATLEMIDKDEDWLLA ELKTQGITDVGTVFLAEYDSGKITVTEYGQ >gi|289656344|gb|ADEA01000023.1| GENE 8 6267 - 7112 958 281 aa, chain + ## HITS:1 COG:NMB0042 KEGG:ns NR:ns ## COG: NMB0042 COG0668 # Protein_GI_number: 15675982 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Neisseria meningitidis MC58 # 3 277 6 280 282 397 74.0 1e-110 MNFDLENLSSFSGWERLAETGMAFGTNLVAALAIFLIGKWIASRLVILMKAALTRAKVDR TLVSFLGNVANIGLLILIIIAALGKLGIPTTSVTALIGGAGLAVALSLKDQLSNFAAGAL IILFRPFKVGDFIKVNGFEGTVSEIKMVQTALSTPDNEEVILPNSIVMSNCIVNRSSMPL CRVQVVVGVDYGCDLKAAKAAVLKAATEHPLCVQTQGKEAVTYITNLADSAIEITLWAWT NEADLGAFRFGLNEQVVENLRAANINIPFPQRDVHIIPQQG >gi|289656344|gb|ADEA01000023.1| GENE 9 7648 - 8343 1144 231 aa, chain - ## HITS:1 COG:BMEI1596 KEGG:ns NR:ns ## COG: BMEI1596 COG1346 # Protein_GI_number: 17987879 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative effector of murein hydrolase # Organism: Brucella melitensis # 6 226 12 235 235 140 37.0 2e-33 MDYVALACLVWTCFAYFVAKKIYRKKPLMIFSPVVTVSVSTIILMLLLGISYDTYHKYTQ GIVFLLTPVTVAFAIPIYENREVIRRQLPILSIAIMVGMFVGVVSAFLMGNMFHFDSEVT NSLMARSISTPFAVVLAGEIHGSAALVSLFTIITGFVGMIFGDLFLAFTRIRFHTANGVA FGNAAHGFGTSRAGQRHETEGVMASLTMILAGLFMVLFGPSMVHLVVWMMG >gi|289656344|gb|ADEA01000023.1| GENE 10 8356 - 8748 491 130 aa, chain - ## HITS:1 COG:BMEI1597 KEGG:ns NR:ns ## COG: BMEI1597 COG1380 # Protein_GI_number: 17987880 # Func_class: R General function prediction only # Function: Putative effector of murein hydrolase LrgA # Organism: Brucella melitensis # 12 123 2 113 117 79 41.0 2e-15 MDSFSRIFQTALQLAIVGLVWAVSEAVVRFTHLPVSSGVLGLFLMLVLLGSGVIKVGMVE RGAKWVLGELVFFFIPIMVSVLQYRDLLMSEGWQLVLTIAVGTALVMISTALTLNFCYRW KRRLHKKLHA >gi|289656344|gb|ADEA01000023.1| GENE 11 8886 - 9776 1389 296 aa, chain + ## HITS:1 COG:BS_ywbI KEGG:ns NR:ns ## COG: BS_ywbI COG0583 # Protein_GI_number: 16080882 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Bacillus subtilis # 1 286 1 286 301 188 34.0 1e-47 MDFKSLHCFAELVRLQSFSAAASALNLTQPTVSKTIQALEEELGVPLLVKENGRKKRQVA TTPIGEEVYRHALNLLHERDLLLARIDGYRHIKSGTLRLGLALLGSDLLSNALFRFRHQW PGIELTFLEQGSLAIEQSLRNNELDAGQLLAPVHEDFDSIPLCDYPLVVLMPRAQARHAA LSLKSLQHEPFILFGSGFSLNETIQTACRSQGFTPNVVCRTGQWDLLADMVAHHMGIALL PEYYARKINPDTFAAVPLTEPEIRWQLTMAWKKHQRPTPALRAWLDIVREEFGKRG >gi|289656344|gb|ADEA01000023.1| GENE 12 10100 - 10765 1147 221 aa, chain - ## HITS:1 COG:NMB0391 KEGG:ns NR:ns ## COG: NMB0391 COG0637 # Protein_GI_number: 15676305 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Neisseria meningitidis MC58 # 1 221 1 221 221 388 95.0 1e-108 MTFTAVLFDLDGVITDTAEYHYRAWKKLAEELGISIDRKFNEQLKGVSRDDSLKRILAHG GKTVGEAEFAELTRRKNDNYLEMIQAVKPEDVYPGILPLLEALRANGKKIALASASKNGP FLLERMGLTHFFDAVADPAAVAHSKPAPDIFLAAAEGVGADIRRCIGIEDAAAGIAAIKA AGALPIGVGKAEDLGSDIALVSGTAELTYVYLQNVWAQSGR >gi|289656344|gb|ADEA01000023.1| GENE 13 10778 - 13036 3695 752 aa, chain - ## HITS:1 COG:NMA2098 KEGG:ns NR:ns ## COG: NMA2098 COG1554 # Protein_GI_number: 15794973 # Func_class: G Carbohydrate transport and metabolism # Function: Trehalose and maltose hydrolases (possible phosphorylases) # Organism: Neisseria meningitidis Z2491 # 1 752 1 752 752 1489 97.0 0 MYTRIMEISPWTLRSAKLEKEHKRLQESLTSLGNGYMGMRGSFEETYSADSHLGTYIAGV WFPDKTRVGWWKNGYPKYFGKAINALNFSKVRIFVDGQEVDLAKNDVAGFSVELDMQHGV LRRSFTVFGVRFDVCKFLSVAQKELAVICWEAVSVDGKTHQVRIDSIIDADVKNEDSNYE EKFWQVLDKGVSDDRSYIATQTVANPFGVEQFIVNAEQTFAGSFKALGGSQTDWQVSNSF EAEVGGTPETFEKRVIVTTSRDYQGLEAVKAAGRALSEKIAGVAFETLLDAHKAGWLHRW EIADVVIEGSDEAQQGIRFNLFQLFSTYYGEDARLNIGPKGFTGEKYGGATYWDTEAYAV PLYLALAEPEVTRNLLQYRRNQLPQAQHNAREQGLAGALYPMVTFTGIECHNEWEITFEE IHRNGAIPYAIYNYTNYTGDESYLAKEGLEVLVEVSRFWADRVHFSKRNGKYMIHGVTGP NEYENNINNNWYTNTLAAWVLDYTREALAKYPRPDLNVSAAELEKWADISANMYRPHDEE LGVFVQHDGFLDKDIRPVSALSPDDLPLNQKWSWDKILRSPFIKQADVLQGIYFFGDRFN IDEKRRNFDFYEPMTVHESSLSPCIHAILAAELGKEEKAVEMYQRTARLDLDNYNNDTED GLHITSMTGSWLAIVQGFAQMKTWGGKLSFAPFLPSAWTGYAFHINYRGRLIKVAVGKEN VVFTLLKGDLLELQVYGKDITLNGSHTVALNK >gi|289656344|gb|ADEA01000023.1| GENE 14 13116 - 14123 1401 335 aa, chain - ## HITS:1 COG:NMA2099 KEGG:ns NR:ns ## COG: NMA2099 COG2017 # Protein_GI_number: 15794974 # Func_class: G Carbohydrate transport and metabolism # Function: Galactose mutarotase and related enzymes # Organism: Neisseria meningitidis Z2491 # 1 335 1 336 336 619 98.0 1e-177 MSDTPATRDFGLLDGRAVTGYVLSNRRGTRVCVLDLGGIVQEFSVLADGVRENLVVSFDD AASYADNPFQINKQIGRVAGRIRGAVFDINGRTYRVEANEGRNALHGGSHGLAVTRFDAV AADGRSVVLRSRLQQSADGYPNDLDLDISYRLDEDDRLTVTYRATALGDTVFDPTLHIYW RLDAGLHDAVLHIPQGGHIPADAEKLPVSTVSDGLEVFDFSRPKPLDAAVAALRRETGRA GFDDAYRVPPDIGRPAAVLQAGRRRISIYSDRNGLVIFTAAPQDFARHDAGVYDALATEA QTLPDSLHWPEFGNIRLNKGDTREATIAYGIESLS >gi|289656344|gb|ADEA01000023.1| GENE 15 14127 - 15482 1905 451 aa, chain - ## HITS:1 COG:NMB0388 KEGG:ns NR:ns ## COG: NMB0388 COG0477 # Protein_GI_number: 15676302 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Neisseria meningitidis MC58 # 1 451 1 451 451 777 95.0 0 MSENTQKTTRQGLPSLPKSTIWMLSFGFLGVQTAFTLQSSQMSRIFQTLGADPHSLGWFF ILPPLAGMLVQPIVGYYSDRTWKPRLGGRRLPYLLYGTLIAVIVMILMPNSGSFGFGYAS LAALSFGALMIALLDVSSNMAMQPFKMMVGDMVNEEQKSYAYGIQSFLANTGAVVAAVLP FVFAYIGLANTAEKGVVPQTVVVAFYVGAALLVITSAFTIFKVKEYDPETYARYHGIDVA ANQEKANWFELLKTAPKAFWTVTLVQFFCWFAFQYMWTYSAGAIAENVWHTTDASSVGYQ EAGNWYGVLAAVQSVAAVACSFVLAKVPNQYHKAGYFSCLALGALGFFSVFFISNQYALV SSYTLIGIAWAGIITYPLTIVTNALSGKHMGTYLGLFNGSICMPQIVASLLSFVLFPMLG GLQANMFLAAGVVLLLGAFSVFLIKETHGGV >gi|289656344|gb|ADEA01000023.1| GENE 16 15955 - 17034 1615 359 aa, chain - ## HITS:1 COG:NMA0611 KEGG:ns NR:ns ## COG: NMA0611 COG0489 # Protein_GI_number: 15793601 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Neisseria meningitidis Z2491 # 1 359 17 375 375 580 83.0 1e-165 MNIPAIRTALEAVQIPQTGRTLGGEKAVQAVEERSDGLYITLQFGFPVNHIGAELANRVQ EAVIGITGDAHIHLSIDTVIGTHKVQPGVATIKGVKNIIAVASGKGGVGKSTTTANLATA MARMGARVGVLDADLYGPSQPTMLGVQDRKPDQQNQKLIPVEADSGIQVMSIGFLVDTDQ AVVWRGPMVSQALQQLMFQSEWDDVDYLFIDLPPGTGDIQLTLSQKIPVTGSVVVTTPQD IALIDARKAVDMFNKVNIPILGVLENMSVHICSNCGHAEAIFGSEGGKNLAGRLNVPLLG QLPLSLPVREAMDSGSAKQLLEDNPAIAEIYTDAAFQIALAIADKGKDFSSRFPKIVVE >gi|289656344|gb|ADEA01000023.1| GENE 17 17179 - 18138 1251 319 aa, chain - ## HITS:1 COG:SA0232 KEGG:ns NR:ns ## COG: SA0232 COG0039 # Protein_GI_number: 15925944 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Staphylococcus aureus N315 # 5 315 6 316 317 376 55.0 1e-104 MKKVGNKVVVVGTGSVGISYAYSMLNQALCDDLVLIDLNRKRAEGEARDFRHGMPYAASP ARIYVGDYGDCSDADIVCICAGLPQRPGETRLDLIDNNLRVFHSIVTAVMASGFDGIFLV ATNPVDVLSYATWRFSGLPKERVIGSGTIIDSARFRSCLGNEFNVAPWSVDAMMIGEHGD SVIAVWSTANISGMSVKKILGQEEGGKARMEKIYSNVRNAAYEVIEAKGSTSHGIGMGLS RISNAILHNQGVVLPVSSLLEGEFGQENVYIGVPTVVNRQGAVRIINLDLSDDEAEQFAR SAELLKSYQRKVDDFMAAR >gi|289656344|gb|ADEA01000023.1| GENE 18 18467 - 20101 2007 544 aa, chain - ## HITS:1 COG:NMA0548 KEGG:ns NR:ns ## COG: NMA0548 COG0706 # Protein_GI_number: 15793542 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YidC # Organism: Neisseria meningitidis Z2491 # 1 544 1 545 545 897 80.0 0 MDSKRLVTFAVIAFAILFGWQKLFPAPKPAQTQHAVQQQQAVAAKAEAALTAAVPITVTT DTVKAVIDEKSGDLRRLTLLKYKASGDANKDFVLFDDGKDHTYVAQAELLDAQGNNVLKN VGFTAPQKQYTLNGDKTEVRLSAEADGLKIDKVYTFTKGSYLINVRFDVTDAGGKPINLT ANYRVVRDSSKPEGQGYFTQSYVGPVVYTPEGQFEKVTFSDLDDDFKSGKNKAEYVHKTN SGWLGMIEHHFMATWILQPKDGQTVCAAGDCQIDIKRRGDNLYSAGVSVPMAAVAAGGKA SVSMNLYAGPQTTSVLAGIADKLQLAKDYGKVHWFASPLFWLLNKLHELIGNWGWSIIAL TIIVKAVLYPLTNASYRSMAKMRAVAPKLQAIKEKYGDDRMAQQQAMMQMYKDEKINPLG GCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITDLSRPDPFYILPLIMAGTMFAQTFL NPPPTDPMQAKMMKIMPMVFSVMFFFFPAGLVLYWVVNNLLTIAQQWYINRNIEKQRTQG EVVS >gi|289656344|gb|ADEA01000023.1| GENE 19 20370 - 20588 226 72 aa, chain - ## HITS:1 COG:NMA0549 KEGG:ns NR:ns ## COG: NMA0549 COG0759 # Protein_GI_number: 15793543 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 12 72 36 96 96 115 90.0 2e-26 MGLTAKIMLGLIRFYQYAVSPLIPPRCRYTPTCSQYALEAVKKYGAFKGGWLAVKRIARC HPFGGSGHDPVP >gi|289656344|gb|ADEA01000023.1| GENE 20 20588 - 20926 172 112 aa, chain - ## HITS:1 COG:NMB1905 KEGG:ns NR:ns ## COG: NMB1905 COG0594 # Protein_GI_number: 15677736 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RNase P protein component # Organism: Neisseria meningitidis MC58 # 1 109 1 109 121 145 79.0 2e-35 MDNRFGRQYRLLKTDDFSSVFALRNRRSRDLLQVSQSGDNGLNHPRLGLVVGKKAAKRAN ARNYMKRVIRDWFRRHKEILPPHDFVVRVHRPFTRENAADAREQLAQLMKKR >gi|289656344|gb|ADEA01000023.1| GENE 21 20929 - 21063 218 44 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15677735|ref|NP_274898.1| 50S ribosomal protein L34 [Neisseria meningitidis MC58] # 1 44 1 44 44 88 100 4e-17 MKRTYQPSVTKRKRTHGFLVRSKTRGGRAVLAARRAKGRKRLAV >gi|289656344|gb|ADEA01000023.1| GENE 22 21354 - 22868 2091 504 aa, chain + ## HITS:1 COG:NMB1903 KEGG:ns NR:ns ## COG: NMB1903 COG0593 # Protein_GI_number: 15677734 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication initiation # Organism: Neisseria meningitidis MC58 # 1 504 1 518 518 786 78.0 0 MTLAEFWPLCLRKLHDSLPAQQFQTWIAPLTVGEENGTWVVYGKNQFACNMLQNRFAADI EAVRAELAPQQAAFLFKTGTGRSYPMASDASGKSLEERPSENTPAHPHTTPALSNKTAAD ILAERMKNLPHGNRRTEPEPAPAAANPTAKTRLDEQRGAAETRYSQTNLSSDYTFETLVE GKGNRIAAAAAQSIAENPGQSYNPFFLYGSTGLGKTHLVQAIGNELLKNRPDAKVRYMHS DDYIRSFMSAVRTNSYDVFKQQYKQYDLLIIDDIQFIKGKDRTMEEFFYLYNHFHNEKKQ LILTCDVLPAKIEDMDDRLKSRFSWGLTLELEPPELEMRVAILQKKAESSGISLTDEAAF FIANLIRSNVRELEGAFNRVSASSRFMNKPIDIDLARDALQDIIAVKHKVITADIIIDAT AKYYRIKISDILGKKRTRNIARPRQVAMSLTKELTNLSLPSIGDAFGGRDHTTVMHGVKA VAKLREDDPELAQDYEKLLIMIQN >gi|289656344|gb|ADEA01000023.1| GENE 23 22957 - 24060 1592 367 aa, chain + ## HITS:1 COG:NMB1902 KEGG:ns NR:ns ## COG: NMB1902 COG0592 # Protein_GI_number: 15677733 # Func_class: L Replication, recombination and repair # Function: DNA polymerase sliding clamp subunit (PCNA homolog) # Organism: Neisseria meningitidis MC58 # 1 367 1 367 367 610 86.0 1e-174 MLILQADRDSLLKPLQAVTGIVERRHTLPILSNVLLESSNGQTNILATDLEIQINTAGPE SQTGDFRITTNAKKFQDILRALPESAIVSLDWADNRLTLKAGKSRFALQTLPAEDFPLMS VGHDVSTAFSLTQETFKNMLSQVQYSMAVQDIRYYLNGLLMQVEGNQLRLVATDGHRLAY ATSQIEAELPKTEVILPRKTVLELFKLLNNPSEQITVELLDNQVRFQCNGTTIVSKVIDG KFPDFNRVIPLDNDKIFLVSRTDFLGALERAAILANEKFRGARLFLQPGLLSVVCSNNEQ EEAREELEIAYQGSELEVGFNIGYLMDVLRNVHADDMQLAFGDANRSTLFTIPNNPNFKY IVMPMRI >gi|289656344|gb|ADEA01000023.1| GENE 24 24497 - 28417 1974 1306 aa, chain + ## HITS:1 COG:XF1224 KEGG:ns NR:ns ## COG: XF1224 COG3419 # Protein_GI_number: 15837826 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, tip-associated adhesin PilY1 # Organism: Xylella fastidiosa 9a5c # 10 1236 13 1151 1217 319 28.0 2e-86 MEKFNKHPYFPLRTLAACTAAALTVLLPTHASATTFDQQPLVGVGSVYPPNILLALSVEY PTAGAAYEAANIWNPKGKRQLNEQKFDQSKSFIGYFDSGKCYSYIGSGDNAYFTPVNTTN NGNCGGNTFSGKALNWLGMSAIDIFRKEMTGGNRAFGAKGSSVENYQNGDMPNRTTLRRA FVMGGEYNTNVESFLNRSISATLLNRTMPSVARTIRSSSGLQDDITVMSSGFKITFCNAP TKIPDSATHIRRSHMNCNEGDANSQTFNMVVEVCKPGLLEDNCHQYGPYYKPEGIMQAKA EKARFSVFGYMNVGTHDGGVMRARMKSLLGGRTNTGIDLGKEINETDGTFIINPDAKDAD ASGVSNSGVINYLNKFGDAGTYKTLDPVDELYYTGLLYLRNRKDLVPASFSAIPPDPVKA ATAKDGFPVISSSNWDDPLLPQTKDNLGNWVESATDGKAAVCRPNYILFIGDTNSNLDQD LPGSGPEYANSHVSDSEIDVSLYMNKIKTNESKVDPKIHSGYQLTNRSSSKSYGAIAGLA YWARTNDFRPQLLGKQYIKSIMLDVVEHNDYKGWANQFYWAAKYGGFYSSKEEEEGGTPE LTAYESDRWRWTDDAVGKSRIIKSNGQTPFPDGVPRNYSAANNPESMIEALRSSFNAASA RSDNPSQAVLNAELNKNGVLDLTTKEKPFVLQSSYKKSQQFGWQGDVIAYYLSDDGNTRF STPQWQLSTLFSTKYRSGWNSRNIWTRSGRNTVLLQNVASSVFNLKSGESTSANYNAQNL IQYIRGSDEFEQDGTFRKRAVDGLLGTVVNSAVTPILAPAEETVADTCKYDNFTSVRNRT TVYAFAANDGMLHIVGKDGEEKYAYIPSTALPKLKNYALSRQPDNTSDGHIFLNDGTPVT AEICLGNGTNKKAKSVIIGTAGRGGEAVYAVDATNLDNAGSSNLLWEFSKADDDGLGLTI HKPVITEIESNGGKKAVAIVSSGYKADKNYKGYIYILDIGKSGGPWINGTHYQRIELGNS GVGAPKVLDTDSDGASDRIYVGDESGNLWRIDYDKATKKWTAKNIFTSTAQEPITGAPDA IASRNGYTVIFSTGKYFTVEDSTRRNLQNYAYGLFDTDGSKIAETSLLRQTINSVAPVAS QTDRTYYSASQNALSDKHKGWKLSLPSGFISIDDALIRNKRVAQFFAFNVNHNDSINTNR NTNNGNICSNNSGISALIEVDLQTGGMYRNPVFDTNRDHRFDSSDALSAMVVHTGQLALK RNTVTMLTKAGKKQGSLLVGDSGEPTNENLNPLFNTVHRISWGEIF Prediction of potential genes in microbial genomes Time: Thu May 26 13:34:41 2011 Seq name: gi|289656343|gb|ADEA01000024.1| Neisseria sp. oral taxon 014 str. F0314 cont1.24, whole genome shotgun sequence Length of sequence - 29438 bp Number of predicted genes - 37, with homology - 33 Number of transcription units - 22, operones - 10 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 68 - 667 346 ## COG1714 Predicted membrane protein/domain - Prom 691 - 750 6.0 + Prom 711 - 770 6.0 2 2 Tu 1 . + CDS 817 - 1932 1975 ## COG0136 Aspartate-semialdehyde dehydrogenase + Term 1955 - 1988 5.1 - TRNA 1990 - 2065 90.5 # Lys TTT 0 0 - Term 2111 - 2161 2.5 3 3 Op 1 . - CDS 2195 - 2659 460 ## COG2913 Small protein A (tmRNA-binding) 4 3 Op 2 . - CDS 2715 - 3983 1058 ## COG5295 Autotransporter adhesin + Prom 4172 - 4231 7.4 5 4 Tu 1 . + CDS 4255 - 4512 119 ## + Term 4610 - 4639 -0.4 6 5 Op 1 . - CDS 4447 - 5112 662 ## COG0406 Fructose-2,6-bisphosphatase - Term 5160 - 5190 3.0 7 5 Op 2 . - CDS 5206 - 5937 863 ## COG3279 Response regulator of the LytR/AlgR family - Prom 5987 - 6046 5.8 - Term 6131 - 6177 -0.5 8 6 Tu 1 . - CDS 6256 - 7143 1055 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases - Prom 7308 - 7367 3.2 + Prom 7112 - 7171 3.6 9 7 Op 1 20/0.000 + CDS 7305 - 7985 812 ## COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone 10 7 Op 2 3/0.000 + CDS 7982 - 8458 182 ## PROTEIN SUPPORTED gi|120555386|ref|YP_959737.1| ribosomal-protein-alanine acetyltransferase 11 7 Op 3 . + CDS 8455 - 9255 586 ## COG1573 Uracil-DNA glycosylase + Term 9293 - 9329 8.9 - Term 9280 - 9317 9.1 12 8 Op 1 . - CDS 9348 - 9452 157 ## 13 8 Op 2 . - CDS 9538 - 9642 133 ## + Prom 10206 - 10265 2.1 14 9 Tu 1 . + CDS 10291 - 11781 2319 ## COG1322 Uncharacterized protein conserved in bacteria + Term 11789 - 11836 14.9 + Prom 11792 - 11851 6.9 15 10 Tu 1 . + CDS 11882 - 12445 846 ## COG0634 Hypoxanthine-guanine phosphoribosyltransferase + Term 12465 - 12504 -0.1 16 11 Op 1 9/0.000 + CDS 12557 - 13015 749 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA 17 11 Op 2 25/0.000 + CDS 13070 - 13339 456 ## COG1925 Phosphotransferase system, HPr-related proteins 18 11 Op 3 . + CDS 13339 - 15102 2948 ## COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) + Term 15111 - 15173 14.5 - Term 15032 - 15077 1.0 19 12 Tu 1 . - CDS 15169 - 15693 947 ## Rmet_5394 hypothetical protein - Prom 15743 - 15802 7.3 - Term 15772 - 15813 8.1 20 13 Op 1 . - CDS 15830 - 16264 695 ## NMC0324 putative periplasmic protein 21 13 Op 2 . - CDS 16271 - 16783 583 ## COG2913 Small protein A (tmRNA-binding) - Prom 16853 - 16912 5.0 22 14 Tu 1 . - CDS 17200 - 18438 1517 ## Pnap_2987 OmpA/MotB domain-containing protein - Prom 18475 - 18534 3.7 23 15 Tu 1 . - CDS 18624 - 19256 891 ## COG0491 Zn-dependent hydrolases, including glyoxylases - Prom 19304 - 19363 6.3 + Prom 19266 - 19325 5.1 24 16 Tu 1 . + CDS 19348 - 20160 1032 ## COG1793 ATP-dependent DNA ligase + Term 20208 - 20265 4.5 - TRNA 20399 - 20484 61.7 # Leu GAG 0 0 - Term 20259 - 20327 23.2 25 17 Op 1 9/0.000 - CDS 20500 - 20862 264 ## COG1314 Preprotein translocase subunit SecG 26 17 Op 2 . - CDS 20869 - 21642 1236 ## COG0149 Triosephosphate isomerase - Prom 21671 - 21730 2.7 + Prom 21608 - 21667 4.4 27 18 Op 1 2/0.429 + CDS 21816 - 22313 280 ## PROTEIN SUPPORTED gi|15902812|ref|NP_358362.1| hypothetical protein spr0768 + Prom 22315 - 22374 3.5 28 18 Op 2 3/0.000 + CDS 22401 - 23057 1145 ## COG2518 Protein-L-isoaspartate carboxylmethyltransferase + Term 23090 - 23126 -0.2 29 18 Op 3 . + CDS 23164 - 23487 589 ## COG0607 Rhodanese-related sulfurtransferase + Prom 23493 - 23552 5.8 30 18 Op 4 . + CDS 23582 - 24556 1653 ## COG2896 Molybdenum cofactor biosynthesis enzyme + Term 24598 - 24649 11.2 - Term 24583 - 24641 4.4 31 19 Tu 1 . - CDS 24659 - 25708 1168 ## COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases - Term 25739 - 25777 -0.4 32 20 Tu 1 . - CDS 25810 - 26367 917 ## COG1949 Oligoribonuclease (3'->5' exoribonuclease) - Prom 26400 - 26459 3.4 - Term 26417 - 26456 9.1 33 21 Op 1 . - CDS 26466 - 26990 326 ## gi|298369766|ref|ZP_06981083.1| hypothetical protein HMPREF9016_02207 34 21 Op 2 . - CDS 26999 - 28291 1273 ## Smlt2990 hypothetical protein 35 21 Op 3 . - CDS 28288 - 28953 492 ## XCV3559 hypothetical protein - Term 28969 - 29010 9.6 36 22 Op 1 . - CDS 29011 - 29127 97 ## 37 22 Op 2 . - CDS 29124 - 29435 190 ## XAC0573 hypothetical protein Predicted protein(s) >gi|289656343|gb|ADEA01000024.1| GENE 1 68 - 667 346 199 aa, chain - ## HITS:1 COG:NMA0353 KEGG:ns NR:ns ## COG: NMA0353 COG1714 # Protein_GI_number: 15793363 # Func_class: S Function unknown # Function: Predicted membrane protein/domain # Organism: Neisseria meningitidis Z2491 # 7 196 13 193 193 138 45.0 5e-33 MNIEKFDLLNQNEVEVTIASAGSRMAAYLINIIFGVIAFSPFFIVVKSLEVKTDGFKQMA ALEGFWQDMGWLMLLGLLVVVLYGIVQIYFMSRDGQSLGKKIMGIRVLKTDGRNPGFVGA VLMREVLYNLIVALVAVAIGKLGQLATGSENVGVKMEQIVSWGAFIVCVVMLFQTKIDRR TLSDYLADTVVVKLPKRQR >gi|289656343|gb|ADEA01000024.1| GENE 2 817 - 1932 1975 371 aa, chain + ## HITS:1 COG:NMA0351 KEGG:ns NR:ns ## COG: NMA0351 COG0136 # Protein_GI_number: 15793362 # Func_class: E Amino acid transport and metabolism # Function: Aspartate-semialdehyde dehydrogenase # Organism: Neisseria meningitidis Z2491 # 1 371 1 371 371 734 98.0 0 MKVGFVGWRGMVGSVLMQRMKEENDFAHIPEAFFFTTSSVGGAAPDFGQAAKTLLDANDV AELAKMDIIVTCQGGDYTKSVFQPLRDSGWNGYWIDAASSLRMKDDAIIVLDPVNRNVID NGLKNGVKNYIGGNCTVSLMLMALGGLFQNDLVEWATSMTYQAASGAGAKNMRELISGMG AIHAQVADELADPSSAILDIDRKVSDFLRSEDYPKANFGVPLAGSLIPWIDVDLGNGQSK EEWKGGVETNKILGRSDNPTVIDGLCVRIGSMRCHSQAITLKLKKDLPVSEIEAILASAN DWVKVIPNEKEASIHELTPAKVTGTLSVPVGRIRKLGMGGEYISAFTVGDQLLWGAAEPL RRVLRIVLGSL >gi|289656343|gb|ADEA01000024.1| GENE 3 2195 - 2659 460 154 aa, chain - ## HITS:1 COG:PM0586_1 KEGG:ns NR:ns ## COG: PM0586_1 COG2913 # Protein_GI_number: 15602451 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Small protein A (tmRNA-binding) # Organism: Pasteurella multocida # 1 125 1 125 125 200 71.0 1e-51 MKLSTFVLPVIAAFALAACGNLSKVTKEGTTDNPVWPNPEKTSFRHSGTQNGSWPNWDNV RQIEAGMNKDQIYQLIGRPHFREGLYGVREWDYLFNYREDGELKTCQYKILFDKNQNAQS FYWLPEGCGPKKPEPVREVIVREVAPAPAARIRQ >gi|289656343|gb|ADEA01000024.1| GENE 4 2715 - 3983 1058 422 aa, chain - ## HITS:1 COG:PM0714 KEGG:ns NR:ns ## COG: PM0714 COG5295 # Protein_GI_number: 15602579 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Pasteurella multocida # 292 422 2589 2712 2712 103 57.0 6e-22 MNHKKQAVFKSGKNVVASLLTAGVVLAGTAYAADHYISVNDGAVAADSRGNYKNDGATGR NSTAIGVDASAKNQGATAIGAATSATNNAAISIGTYSNASGVSSTAIGQGTLASANAATA IGRQANASGNGSTAIGSASKASGSAAIAFGSGTSASGTNSTALGQGAQSSGINSSAVGTK ANASGLGSSAFGSGSVASGKYASAYGTNSNASGDASVAVGLQSKASGKGAVAIGRNAVAS DEYSVALGANSTTSAAVGTTNATVGGVNYGGFAGTAPAATVSVGKKDFERTITNVAAGRI TSDSTDAINGSQLYSVATQVGNNTNAINQLNNRHANLDKRLDDVEDDLRAGIAGATAIGF LQRPNEAGKSIVSAAVGGFRDQQAVAVGYAHNSDNNKWSIKTGVSVNTKKDVNWGGSVGY QW >gi|289656343|gb|ADEA01000024.1| GENE 5 4255 - 4512 119 85 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFHIINCILNTNNYYLYNKQTISFHLFANTFYIIHYVYFKVIGFTKRLAFDYVKNCRHYF RFHFLFIYLFAYTHNFPTFSIEYQP >gi|289656343|gb|ADEA01000024.1| GENE 6 4447 - 5112 662 221 aa, chain - ## HITS:1 COG:lin0565 KEGG:ns NR:ns ## COG: lin0565 COG0406 # Protein_GI_number: 16799640 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Listeria innocua # 5 205 9 209 235 155 38.0 4e-38 MSLEVYLVRHGKTVFNTTGRVQGWSDSPLMPEGVDVAEKLGRALAGKIDFDAAFSSTSPR AVDTAKLILASKGQNDLPLIQINELKEYCFGSFEGDLAENVHHMIAQTRGFADIKSWLKA YRHGEHNMLAESISELDPLGLAETEAQFVKRLKKGLEILVEQSPESGKVLLVSHGMSITG ILKSIDPASSLYKSVKNATVSRLVFNGEGWKIMSIGEQINE >gi|289656343|gb|ADEA01000024.1| GENE 7 5206 - 5937 863 243 aa, chain - ## HITS:1 COG:XF1626 KEGG:ns NR:ns ## COG: XF1626 COG3279 # Protein_GI_number: 15838227 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Xylella fastidiosa 9a5c # 1 230 1 233 252 100 33.0 2e-21 MPSAIIVEDEVLAAERLRVLLEECNVVLLKTFHHAQPALDWLSVHETDIVFADIGLPEIT GLELVERIKRVAKRQPEVIFTTAYEEHALRAFELAAVDYLLKPIRMTRLQVALDRVSEKY KEKADDFTHFRVFSRDRMIEIPWQQARYLMAEHKTVYLITGDGQSYELPKTLVYWEELLG EKVIRIHRNALVFRHTLDCLIRLDDEEDESNASWAARVLDIEKPLPVSRRQLAAIRKILR GVV >gi|289656343|gb|ADEA01000024.1| GENE 8 6256 - 7143 1055 295 aa, chain - ## HITS:1 COG:NMB0349 KEGG:ns NR:ns ## COG: NMB0349 COG0008 # Protein_GI_number: 15676264 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Neisseria meningitidis MC58 # 1 292 1 292 295 467 78.0 1e-131 MYIGRFAPSPTGLLHIGSLLTAVASYADARSRGGKWLVRMEDLDPPREMAGAAEHILRTL EAFGFEWDGAVAYQSRRYAIYEAALGRLKDEGLVYPCYCSRKDWQAAASAGADGFVYSGR CRNPADRPSETGKQPAWRIRVPDETVGFDDEVVGHYAQNLARDIGDFVLLRADGYWAYQL AVVADDAEQGVTHVVRGQDLLVSTPRQIFLQRCLGFETPHYAHLPLLVNSAGQKWSKQTL APALDMAQCDTLLRQVMGYLNLPPAPDTDRPRDLLDWAAENWHMAAVPAAAVCTE >gi|289656343|gb|ADEA01000024.1| GENE 9 7305 - 7985 812 226 aa, chain + ## HITS:1 COG:NMA0585 KEGG:ns NR:ns ## COG: NMA0585 COG1214 # Protein_GI_number: 15793576 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Inactive homolog of metal-dependent proteases, putative molecular chaperone # Organism: Neisseria meningitidis Z2491 # 1 224 1 223 225 289 72.0 2e-78 MQADFNLPVLAIDTSTSFLSLALRANGKTLVRHNEVGNRQSELILPQTGELFAEAGIGAA DLGAIVYAQGPGAFTGLRIGIGVAQGLAAPFATPLIGVPCLDAAAYRLPGRPCVLAATDA RMGEVFYAWFDTAAHRRLSGYHVGRAAEITLPTACTECSDGIGNAFALADKPPFAGSPQM PTAADYLDLAATGRYPATNAAQAALLYVRDKIALTAREQAERKAAP >gi|289656343|gb|ADEA01000024.1| GENE 10 7982 - 8458 182 158 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|120555386|ref|YP_959737.1| ribosomal-protein-alanine acetyltransferase [Marinobacter aquaeolei VT8] # 1 143 15 155 160 74 33 6e-13 MIIRAATAADCAGLAAADSRSNPSPWSENQFRSALDERFTTVLIAECGGKTAGFIVWQSV CGESELHLVATDPPYRRQGVAAQLLAQWFQTAFSEHAERLFLEVRAGNSAAQNLYRKFGF AECGRRKNYYPLPEGGYEDAVLMTRDPSDSETAEIPKP >gi|289656343|gb|ADEA01000024.1| GENE 11 8455 - 9255 586 266 aa, chain + ## HITS:1 COG:NMB1873 KEGG:ns NR:ns ## COG: NMB1873 COG1573 # Protein_GI_number: 15677708 # Func_class: L Replication, recombination and repair # Function: Uracil-DNA glycosylase # Organism: Neisseria meningitidis MC58 # 2 264 1 239 245 160 41.0 3e-39 MMLSSRYLHLHEALGLGPMWLNKDAVFSPSETAPVKSKDAVPPAAAKPVAQAVQAAASGR RARMAAMAAVGSQTEAPPAATPFQAEGPPETAPVAEMRAKSVPPAAPTPAAVFSDGLPRI ETSVRPSEIMVISICPSTEDCLAGHLFSGAAGVLLDKMLAAVGLQAHQAYKTSWIKTAPI SGDRPDNARISGELPHVRTELAQSQAKAVLFLGQDFEKPELAKDMAQLCGGLPFFVIPHP ARLLRQPQFKARAWAELKKLKRLLGR >gi|289656343|gb|ADEA01000024.1| GENE 12 9348 - 9452 157 34 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNDLIKLAAASLIGMSGLAVSATTVAQNMADAAK >gi|289656343|gb|ADEA01000024.1| GENE 13 9538 - 9642 133 34 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKEIIKFAAAALIGMSGVNAGTRSVAENIKNASR >gi|289656343|gb|ADEA01000024.1| GENE 14 10291 - 11781 2319 496 aa, chain + ## HITS:1 COG:NMA0386 KEGG:ns NR:ns ## COG: NMA0386 COG1322 # Protein_GI_number: 15793394 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 27 489 117 579 594 567 73.0 1e-161 MNFPSLPIVAACAALLGALIAWLIVQIRSQRRQHLLEQQLAERTQQYRFARQAQETAEEA LADSRRHIQDLQIELQELGNRFAAAERQIAYLQEREAEAGRLKQDYADLQQAAQTLQVNN ERLHTRLEQERLAADEKLALLTEARQSLGEQFQNLANTILEEKSRRFTEQNRDQLNQILT PLNERIHGFGELVQQTYEKESRQRLTLENELKRLQTLNTQLHGDAKALTDALTGTQNKTQ GNWGEMILESVLEHSGLQKGREYTVQAASVRQEEDGRTRRLQPDVLVNLPEGKQIVIDSK VSLTAYVRHTQAADAETAERELAAHIASIRAHVRNLSQKDYTDLEGVNTLDFVFMFVPVE PAYLLALQHDAGLFQECFDKRIMLAGPSTLLATLRTVANLWRNEQQNQNALAIAEEGGRL YDKFVGFVQTLESVGKNMAQAQSQFQAACKQLSQGKGNLVSRAEKLRALGVKAGKRLDKN LVENSQTASLPDTDTD >gi|289656343|gb|ADEA01000024.1| GENE 15 11882 - 12445 846 187 aa, chain + ## HITS:1 COG:NMB2047 KEGG:ns NR:ns ## COG: NMB2047 COG0634 # Protein_GI_number: 15677869 # Func_class: F Nucleotide transport and metabolism # Function: Hypoxanthine-guanine phosphoribosyltransferase # Organism: Neisseria meningitidis MC58 # 1 184 1 184 187 335 86.0 4e-92 MTDLATKRRHTQTMLDRAELLFDQDQCRAALQRIADEITRDLSGEYPLLLPVMGGAVVFT GQLLPLLRFPLDFDYIHVSRYGDKLAGGAFNWKRMPDPEQIKNRHVVVLDDILDEGHTMA AIQEKLREMGAASCRAAVFANKLIGKEKPTKADYVGLDVPNRYVFGYGMDAAGCWRNLGE IYALNQD >gi|289656343|gb|ADEA01000024.1| GENE 16 12557 - 13015 749 152 aa, chain + ## HITS:1 COG:NMA0390 KEGG:ns NR:ns ## COG: NMA0390 COG2893 # Protein_GI_number: 15793398 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Neisseria meningitidis Z2491 # 1 145 1 145 145 231 77.0 3e-61 MIGLLIITHESIGEAYRSLAQHFFPHGTPENIHILGVQPDEDQDDIINNAIAKLQEFPEN HGVLIMTDIFGATPCNAARRMVRADKSAILTGLNAPMLIKAIQHSPAAEHLNAFTDMVKE AAVRGIFAITAEPEGLVCKKSSERIEDVSKSS >gi|289656343|gb|ADEA01000024.1| GENE 17 13070 - 13339 456 89 aa, chain + ## HITS:1 COG:NMA0391 KEGG:ns NR:ns ## COG: NMA0391 COG1925 # Protein_GI_number: 15793399 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, HPr-related proteins # Organism: Neisseria meningitidis Z2491 # 1 89 1 89 89 143 89.0 9e-35 MLKQSVEIINKLGLHARASSKFTQTASQFKCEVWVIKDGSRVNGKSIMGLMMLAAAKGTV IELETDGADEAAAMQALTDLINDYFGEGE >gi|289656343|gb|ADEA01000024.1| GENE 18 13339 - 15102 2948 587 aa, chain + ## HITS:1 COG:NMB2044 KEGG:ns NR:ns ## COG: NMB2044 COG1080 # Protein_GI_number: 15677866 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) # Organism: Neisseria meningitidis MC58 # 1 584 1 584 591 981 84.0 0 MSIVLHGVAAGKGIAVGHAHLITRGTAEVPQYDVSDDLIDAEAARFDAAIKATRKELEQL RSAIPENAPTELGAFISLHLMLLTDVTLSREPVDILKEQKINAEWALKQQSDKLAAQFDN IEDDYLRERKQDMLQVVRRIHNNLVGQSNDLNLNDGLFEDTILIAHDLSPADTVLFKEQK ITAFVTDAGGPTSHTAILGRSLDIPSVIGLHNARKLITENETVIVDGINGVLIIEPDEVV LNEYRRLAREYRNHKRELNKLKKTAATTADGVSIELLANIESAEDIKALHNFGADGVGLF RSEFLYLNRDTMPSEDEQYEVYSAIVKKMKGKSVTFRTVDLGVDKNPRWFGQNTTPNGSL NPALGLTGIRLCLAEPVMFRTQMRAILRAAVHGTVRMMWPMITSVSEVRQCLIHLDTAQR QLAERGETFGTVNVGCMIEIPSAAMTVGSILKLIDFISIGTNDLIQYVLSVDRGDDSVSH LYQPDHPAVLKTIQHIIRTANRVKKSVSICGEMAGDTAFTRILLGMGLRRFSMNPNNLLA VKNIVLHSDTERLRHETAKLLRNDDPEKSEKLLKALNSISVAVETAQ >gi|289656343|gb|ADEA01000024.1| GENE 19 15169 - 15693 947 174 aa, chain - ## HITS:1 COG:no KEGG:Rmet_5394 NR:ns ## KEGG: Rmet_5394 # Name: not_defined # Def: hypothetical protein # Organism: R.metallidurans # Pathway: not_defined # 4 170 23 188 191 92 31.0 7e-18 MATPIAALIYRGEGDDELRTLWQAVGQLRDRGFSIKGLLNKTDAQGGKMRDRVCSLTDSR EYAIMYDGGCTEDTCKLDPRGLAASSEVIREALQSPPDILVFNKFGHAESEGSGLIDEYA QAVAAGIPVISLLQDKYLPQWREFTDGMGTELENGLQGVLDWAQAQKGRQDAAE >gi|289656343|gb|ADEA01000024.1| GENE 20 15830 - 16264 695 144 aa, chain - ## HITS:1 COG:no KEGG:NMC0324 NR:ns ## KEGG: NMC0324 # Name: not_defined # Def: putative periplasmic protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 5 144 8 147 147 197 65.0 1e-49 MLRKAVLCALMLAGMNAFAVSGENIKDYMSKRKVIVNTSKAELCFADEKKCHPVLIGKTT PKGTFSMNIYKTDKAGYGGDVIGFKQEKDFLFALHRVWTLKPSERRMERIASPVVSDRII TNGCINVTNDVYNKLKTYFVLEVI >gi|289656343|gb|ADEA01000024.1| GENE 21 16271 - 16783 583 170 aa, chain - ## HITS:1 COG:NMA0557 KEGG:ns NR:ns ## COG: NMA0557 COG2913 # Protein_GI_number: 15793551 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Small protein A (tmRNA-binding) # Organism: Neisseria meningitidis Z2491 # 1 170 1 171 171 251 80.0 5e-67 MKLKQIVKTGLPLLAACLLAACATKSKITADGTTDSPVFPKPYSLTFDKDRGTFPTYDEL EQMRPGLTKDDIYKILGRPHYDEGMFGVREWDYLFHFHTPGVEADPANKSGVDGITTCQY KVVFDKHKFARSFYWNPVFPEDAACPPPAPKAEPQVIIREVEPTRSKIRQ >gi|289656343|gb|ADEA01000024.1| GENE 22 17200 - 18438 1517 412 aa, chain - ## HITS:1 COG:no KEGG:Pnap_2987 NR:ns ## KEGG: Pnap_2987 # Name: not_defined # Def: OmpA/MotB domain-containing protein # Organism: P.naphthalenivorans # Pathway: not_defined # 285 411 54 179 179 90 48.0 8e-17 MAFDLGNLLQSQLGDVLGGFLASSGEPAESSTKAAGLALPAVVAGLLKHIGANPSNASGV LDLLTGTSGSILDGAVAKASSAEGVGGLLETGKKLLPELLGGNAANVADRISQESGVSKA ASGSLLALSLPLVLSVLRGKAKDNNLQGSQILGLLGQQQGWLSQALSSDMLSALGIGSLS GLFGSLSGLAGNFGSATAAGTAAVAGATAAAKKGGFGKWIILGIAALAALFAFKSCNTGG GHAPTETAASAAEASEPEDGAVSAVETSAPVMPTSAVLDEHENEPVAASEAIASPVSAPA ADTSQVVMDGGVAKFFFATGKNDVAEGAEQVVADLIEAGKEGKKLVISGFADSTGNAASN QELSKKRAQAVQAFFEAHGVKAGNIELRKPKSTTGAEGNDAEGRRVEVKVEG >gi|289656343|gb|ADEA01000024.1| GENE 23 18624 - 19256 891 210 aa, chain - ## HITS:1 COG:NMA0387 KEGG:ns NR:ns ## COG: NMA0387 COG0491 # Protein_GI_number: 15793395 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Neisseria meningitidis Z2491 # 1 210 1 210 210 340 74.0 1e-93 MALQFEILAVTPFRQNCTLLWDDETREAVLTDMGGDVLFVLNEVAARRLDVKEIWLTHGH LDHAGGVVEFLSHKDVPVVGPHRDDEFLLDSLPDITAQYGFPVSPPFKPTRWLEEGDVLN VGRYRFDVLHIPGHTPGQVVFYCAQAGLLVAGDVLFYESIGRTDFPRGNHADLIDNIRRK LLVLPDDTQVIAGHGRMTTIGHEKRHNPFL >gi|289656343|gb|ADEA01000024.1| GENE 24 19348 - 20160 1032 270 aa, chain + ## HITS:1 COG:NMA0388 KEGG:ns NR:ns ## COG: NMA0388 COG1793 # Protein_GI_number: 15793396 # Func_class: L Replication, recombination and repair # Function: ATP-dependent DNA ligase # Organism: Neisseria meningitidis Z2491 # 4 268 9 273 274 414 75.0 1e-116 MKIIIPICTALCISLPASASGLLLAQEYKNQEIAGWAMSEKLDGVRAYWDGKRLISRQGH PFTPPADYTRNFPPYPIDGELYTSRGRFEQISAAVRSDKSDWRGIKLHVFDVPKAAGNLY QRLAVLQSWLEAHPEAPIAVIRQIPARDRAHAQTFLKEIEAQGGEGVMLRNPNHPYAAGR SSQLLKLKSRHDAECTVTQHYEGKGKNAGRLGAVGCKNQYGEFRIGSGFKDQDRDNPPPV GSTITYRYRGFTQKGTPRFATFVRIRQDSR >gi|289656343|gb|ADEA01000024.1| GENE 25 20500 - 20862 264 120 aa, chain - ## HITS:1 COG:NMA0569 KEGG:ns NR:ns ## COG: NMA0569 COG1314 # Protein_GI_number: 15793560 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecG # Organism: Neisseria meningitidis Z2491 # 1 120 1 115 116 158 76.0 2e-39 MEAFKTVIWIINIISALAVIVLVLLQHGKGADAGATFGSGTGSAQGVFGSGGNANFLSHA TAIAATFFFATCMAMVYIHSNTTRHGLDFSNVKQSLPAKTQQAPTNGGKTDTVPAAPKQQ >gi|289656343|gb|ADEA01000024.1| GENE 26 20869 - 21642 1236 257 aa, chain - ## HITS:1 COG:NMB1887 KEGG:ns NR:ns ## COG: NMB1887 COG0149 # Protein_GI_number: 15677722 # Func_class: G Carbohydrate transport and metabolism # Function: Triosephosphate isomerase # Organism: Neisseria meningitidis MC58 # 6 255 6 255 257 469 92.0 1e-132 MDHDNGMWEQKWVIGNWKMNGRLQNNNALMHRFRILPTAERVLIGLAAPTVYLLQLHNAM QIVLSNRILTCAQDVSRFPNNGAYTGEVSAEMLADIGTDIVLIGHSERSLYFGEKNEIHR QKMENVLNVGLIPLLCVGESLDEREAGREKEIIAHQLSILKGLNTGHIAVAYEPVWAIGT GKVATVEQIAAMHAFIYQEILSLCGSDVKIRVLYGGSVKAENAADIFAVPYVDGALVGGA SLSYDSFTAIINAAQAS >gi|289656343|gb|ADEA01000024.1| GENE 27 21816 - 22313 280 165 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15902812|ref|NP_358362.1| hypothetical protein spr0768 [Streptococcus pneumoniae R6] # 9 157 4 150 165 112 40 3e-24 MHTIHIASSDKTSVYREILPQIESLTDGEPCFTANLANIAAVLKEAFGWFWVGFYLVERA SNELVLGPFQGPAACTRIPYGRGVCGQAWAGDKAVVVEDVNRHPDHIACSSLSQSEIVIP LFDRNRRCFGVLDADSDRLAQFDETDARYLNQLAELVGRLYERDI >gi|289656343|gb|ADEA01000024.1| GENE 28 22401 - 23057 1145 218 aa, chain + ## HITS:1 COG:NMA0572 KEGG:ns NR:ns ## COG: NMA0572 COG2518 # Protein_GI_number: 15793563 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Protein-L-isoaspartate carboxylmethyltransferase # Organism: Neisseria meningitidis Z2491 # 1 218 1 218 218 300 75.0 1e-81 MDFEKARFNMVEQQIRPWDVLDFDVLDALGDIPREKFVGAGFQGLAYADKELPLPNGGKM LEPKVVARLVQGLKLTKQDKVLEIGTGSGYATALLAALAGEVVTADIDAAQLEAAKTVLD GIGCGNVRYVCNDALAQETEGAPFDAVYVGGSVGRVPETLKRQLKDGGRMAVIVGGKPVQ RALLITRDGGVFREKVMFDTLAAGLSDKADKPFGDFDF >gi|289656343|gb|ADEA01000024.1| GENE 29 23164 - 23487 589 107 aa, chain + ## HITS:1 COG:NMB1884 KEGG:ns NR:ns ## COG: NMB1884 COG0607 # Protein_GI_number: 15677719 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Neisseria meningitidis MC58 # 1 107 1 107 107 180 78.0 6e-46 MHIPQLSPAELQRWRQDGKAFLLLDVRTDEETAVCTLPDSVHIPMNLIPLRSNELPDGLP IVVYCHHGIRSLHTAMYLADAGFETLYNLQGGIDAWAAQIDENMARY >gi|289656343|gb|ADEA01000024.1| GENE 30 23582 - 24556 1653 324 aa, chain + ## HITS:1 COG:PA1505 KEGG:ns NR:ns ## COG: PA1505 COG2896 # Protein_GI_number: 15596702 # Func_class: H Coenzyme transport and metabolism # Function: Molybdenum cofactor biosynthesis enzyme # Organism: Pseudomonas aeruginosa # 2 324 6 331 331 279 46.0 4e-75 MLTDPFGRTVDYLRISVTDRCDLRCTYCLPKGFKGFAVPKDWLTIEETARVAAAFARLGT KRFRLTGGEPLLRKGLTELAAEISRQPGVEDISLTTNGTRLGQQARALRAAGVRRLNISL DSLRRDCVASITGSDCLPQVLEGITAAKEAGFERIKINMVPLKGINDTDLDDMVAFCIQH GFILNLIEAMPMGATGQMHAKVNLQPVLEDLRRKFGLTPFEGRIGGGPARYWHNGSSGFT LGLITPMSQHFCATCNRVRLSATGNIHLCLGQEDKVPLRDLLRGGCTDAELDQKIRDAIA LKPEKHEFVENPKKIIRVMALTGG >gi|289656343|gb|ADEA01000024.1| GENE 31 24659 - 25708 1168 349 aa, chain - ## HITS:1 COG:BH2845 KEGG:ns NR:ns ## COG: BH2845 COG0639 # Protein_GI_number: 15615408 # Func_class: T Signal transduction mechanisms # Function: Diadenosine tetraphosphatase and related serine/threonine protein phosphatases # Organism: Bacillus halodurans # 14 84 3 76 246 59 43.0 8e-09 MSYRYRQSLPDTPLDIVGDVHGEFAAFQSLLHRLGYRDDGFHPHGRRLVFVGDLCDRGPD SPAMLAWFKQAYERGWAWMVLGNHELNILADDPKDGSGWFFDVRAEKDAHYAPWHCVEEK EKTELRAWLAEQPLLLEREDLRIVHAAWLPPQIERLEEAKGESLTAQYRRFDAELKHRLQ TASWYPDYLYEQAHYAPQAENPDHAPPPMPATARYELERSRLHPIRALTSGVERLADKPF YAGGRWRGTTRCAWWDDYRDDTPVVIGHYWRSWQPSPAAVVAERLLLPPQPDVWHGARRN VFCVDFSIGASWRARKFPQKYRPEQFRLAALRWPEKVLVFDNGECAATR >gi|289656343|gb|ADEA01000024.1| GENE 32 25810 - 26367 917 185 aa, chain - ## HITS:1 COG:NMA0594 KEGG:ns NR:ns ## COG: NMA0594 COG1949 # Protein_GI_number: 15793584 # Func_class: A RNA processing and modification # Function: Oligoribonuclease (3'->5' exoribonuclease) # Organism: Neisseria meningitidis Z2491 # 3 179 2 178 187 311 86.0 3e-85 MTQNASNLCWLDMEMTGLDPERERIIEVAMIITDSDLNVLAQSEVYVVHQSDELLDGMDA WNTATHGRTGLTQRVRESRLTEAEVEQKLLDFIAQWIPEKATPMCGNSIHQDRRFMVKYM PRLEAYFHYRNLDVSTLKELAKRWNPPVAKGVVKRGSHQALDDILESIEEMRYYRENFLK LPEAV >gi|289656343|gb|ADEA01000024.1| GENE 33 26466 - 26990 326 174 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298369766|ref|ZP_06981083.1| ## NR: gi|298369766|ref|ZP_06981083.1| hypothetical protein HMPREF9016_02207 [Neisseria sp. oral taxon 014 str. F0314] # 1 174 1 174 174 292 100.0 5e-78 MELEQKIDSLADNVIALAGQTEKRAKNAEQLAVQAQRVLDSSSNRLDGSAERIRQEAAEA VRSGLEQSVGKFTERLETTGRWLLETVREVEGRQQKSAKDLKKLVWVSVAVFALTGSLCF GTVIYLIQSAKTEMKRVEWIADINKAVENGKLSRCGEDGGICAKVKGKPVRLDK >gi|289656343|gb|ADEA01000024.1| GENE 34 26999 - 28291 1273 430 aa, chain - ## HITS:1 COG:no KEGG:Smlt2990 NR:ns ## KEGG: Smlt2990 # Name: not_defined # Def: hypothetical protein # Organism: S.maltophilia # Pathway: not_defined # 4 302 3 305 442 152 35.0 2e-35 MSNITRQQQADLAVDAYNSRTVTKPWDKPINIGGHDYKVLAVRHNRSTGYHGTVYQDVRT NEIIVAHRGTEPVLDDWLDAYIDWKMVSNSVNYQAADSEKLTRIAIEEAERFHQKRPDLP APQITHVGHSLGGAHVEIQAYRFGHEGVTFNGYGAVGMRGVRQGDGDVTNYAKAADVVSA ANAHYGKVILLAEQDDIAPMKKIGYNNKSNTAAPYAFGVAAISMGTHLSSHFVGKDSILS DRNYDRARRLADENKFMIQDYRGDVETSKNVIAAAKFATSNPIEKIEILRNRLEKYDREQ ERIKEIINSVPPPKSLFDSRMLHMMQNDGTRPDAGKEAYADAGKPDISKPLAKNASADEF REYGFAALLADDDDKRYAALDSLLDSDVGRGLRQNADKVYAAQEREQEMARLAEEQARQV DAPVMRMGRG >gi|289656343|gb|ADEA01000024.1| GENE 35 28288 - 28953 492 221 aa, chain - ## HITS:1 COG:no KEGG:XCV3559 NR:ns ## KEGG: XCV3559 # Name: not_defined # Def: hypothetical protein # Organism: X.campestris_vesicatoria # Pathway: not_defined # 24 220 5 193 194 102 30.0 1e-20 MKPMTALMTAAVFSVLSLNACGGSEKSMSIQEQTEARFQLNPHPKQAYRLRIKINDAPGP LKLMGKFGVGYKAENCSYVINRMEGATANPEKDVETQVRQLGEFEYETVVYADAVLDEDY FGEGICHWRPDGFGVAFKATGHPKETKFNFGDFLDNLIKKKTLTKYFWNGSYPYAKNEDG SIFIRSDGIGFTDWGENLDTLPPERQKDLFSITITLEEVKS >gi|289656343|gb|ADEA01000024.1| GENE 36 29011 - 29127 97 38 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSHINKQQQADLAVDACNICVFTVNLSTNSLIHYFRYN >gi|289656343|gb|ADEA01000024.1| GENE 37 29124 - 29435 190 103 aa, chain - ## HITS:1 COG:no KEGG:XAC0573 NR:ns ## KEGG: XAC0573 # Name: not_defined # Def: hypothetical protein # Organism: X.axonopodis # Pathway: not_defined # 1 101 136 230 232 76 41.0 2e-13 MLDEDYFGEGICHWKPDGFGVAFKATGHPEETKFNFGDFLDDLMEKKTLTKYYWKWSYPY SKREDGTLYSDSVDFGIVSPEIYSAEQHKEMFTITVTLEEVQP Prediction of potential genes in microbial genomes Time: Thu May 26 13:35:33 2011 Seq name: gi|289656342|gb|ADEA01000025.1| Neisseria sp. oral taxon 014 str. F0314 cont1.25, whole genome shotgun sequence Length of sequence - 14548 bp Number of predicted genes - 15, with homology - 15 Number of transcription units - 11, operones - 3 average op.length - 2.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 28 - 516 473 ## XCC3126 hypothetical protein - Term 532 - 581 12.1 2 2 Tu 1 . - CDS 612 - 2288 2848 ## COG2759 Formyltetrahydrofolate synthetase - Prom 2375 - 2434 5.2 + Prom 2375 - 2434 4.5 3 3 Tu 1 . + CDS 2481 - 2912 740 ## COG2510 Predicted membrane protein + Term 2927 - 2968 11.3 - Term 2908 - 2964 21.1 4 4 Tu 1 . - CDS 2985 - 4217 678 ## PROTEIN SUPPORTED gi|163762490|ref|ZP_02169555.1| ribosomal protein L28 - Prom 4326 - 4385 2.0 + Prom 4285 - 4344 3.6 5 5 Tu 1 . + CDS 4374 - 5738 2187 ## COG0486 Predicted GTPase + Term 5745 - 5776 -0.9 6 6 Tu 1 . + CDS 5869 - 6114 441 ## COG5007 Predicted transcriptional regulator, BolA superfamily + Prom 6188 - 6247 2.0 7 7 Op 1 . + CDS 6273 - 8444 3143 ## COG1289 Predicted membrane protein 8 7 Op 2 . + CDS 8519 - 9235 1035 ## COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase + Term 9253 - 9304 17.0 - Term 9241 - 9293 15.1 9 8 Op 1 . - CDS 9316 - 9942 654 ## gi|298369778|ref|ZP_06981095.1| periplasmic protein 10 8 Op 2 . - CDS 10000 - 10647 598 ## COG0564 Pseudouridylate synthases, 23S RNA-specific 11 8 Op 3 . - CDS 10660 - 11232 728 ## COG2119 Predicted membrane protein - Prom 11416 - 11475 6.5 - Term 11441 - 11498 15.5 12 9 Op 1 . - CDS 11510 - 12793 697 ## ACIAD0355 hypothetical protein 13 9 Op 2 . - CDS 12874 - 13917 669 ## COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase - Prom 13950 - 14009 2.8 14 10 Tu 1 . + CDS 14122 - 14265 60 ## COG4105 DNA uptake lipoprotein + Term 14300 - 14331 4.1 - Term 14288 - 14319 4.1 15 11 Tu 1 . - CDS 14371 - 14547 64 ## COG1555 DNA uptake protein and related DNA-binding proteins Predicted protein(s) >gi|289656342|gb|ADEA01000025.1| GENE 1 28 - 516 473 162 aa, chain - ## HITS:1 COG:no KEGG:XCC3126 NR:ns ## KEGG: XCC3126 # Name: not_defined # Def: hypothetical protein # Organism: X.campestris # Pathway: not_defined # 18 158 24 166 219 85 33.0 5e-16 MKPITALMTAAVFSVLSLNACGGSEKSMSIQEQTEARFQLNPHPKQAYRLRIKINDAPGP LKLMGNFGVGYKAENCSYIINRIEGAPASPEKNVETKIRQLGEFEYETVVYVDAMLDEDY FGEGICHWKPDGFGVAFKATGHPEETKFNFGDFLDDLMEKKR >gi|289656342|gb|ADEA01000025.1| GENE 2 612 - 2288 2848 558 aa, chain - ## HITS:1 COG:NMA0617 KEGG:ns NR:ns ## COG: NMA0617 COG2759 # Protein_GI_number: 15793607 # Func_class: F Nucleotide transport and metabolism # Function: Formyltetrahydrofolate synthetase # Organism: Neisseria meningitidis Z2491 # 1 558 1 558 558 1030 97.0 0 MSFKTDAEIAQSSTMRPIGEIAAKLGLNVDNIEPYGHYKAKINPAEAFKLPQKQGRLILV TAINPTPAGEGKTTVTIGLADALRHIGKDSVIALREPSLGPVFGVKGGAAGGGYAQVLPM EDINLHFTGDFHAIGAANNLLAAMLDNHIYQGNELNIDPKRVLWRRVVDMNDRQLRNIID GMGKPVDGVIRPDGFDITVASEVMAVFCLAKDIGDLKERLGNILVAYAKDGSPVYAKDLK AHGAMAALLKDAIKPNLVQTIEGTPAFVHGGPFANIAHGCNSVTATRLAKHLADYAVTEA GFGADLGAEKFCDIKCRLAGLKPDAAVVVATVRALKYNGGVERANLGEENLEALAKGLPN LLKHISNLKNVFGLPVVVAINRFVSDSDVELAMIEKACAEHGVEVSLTEVWGKGGAGGAD LARKVVNAIDNQPNNFSFAYDVELSIKDKIRAIAQKVYGAEDVDFSAEASAEIASLEKLG LDKMPVCMAKTQYSLSDNAKLLGCPEGFRITVRGITVSAGAGFIVALCGNMMKMPGLPKV PAAEKIDVDADGVIHGLF >gi|289656342|gb|ADEA01000025.1| GENE 3 2481 - 2912 740 143 aa, chain + ## HITS:1 COG:NMB1840 KEGG:ns NR:ns ## COG: NMB1840 COG2510 # Protein_GI_number: 15677676 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis MC58 # 1 143 1 143 143 223 96.0 1e-58 MGSNAWLFWALASAGFASLTAIFAKMGLQGIDSDFATFIRTLVILAALVLFLTYTGKWQG VNGFTGRNWTFLILSGLATGASWLAYFKALQLGNASQVAPVDKFSLVLVALMAVVFLDER PSTQEWVGLGLVTAGVLTLALKR >gi|289656342|gb|ADEA01000025.1| GENE 4 2985 - 4217 678 410 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762490|ref|ZP_02169555.1| ribosomal protein L28 [Bacillus selenitireducens MLS10] # 114 408 21 319 336 265 44 1e-70 MFSFFRRKKKQETPEPVEQGQNEAAAAEAAAGQPDQEERPSENAAEEAVGSETLADNAMP SETAAEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPSAPAEEAARPSWAARLRQGLA KSRNQMAKSLAGVFGGGQIDEDLYEELETVLITSDMGMEATEYLMKDVRNRVSLKGLKDG NELRGALKEAVYDLIKPLEKPLVLPETKEPFVIMLAGINGAGKTTSIGKLAKYFQAQGKS VLLAAGDTFRAAAREQLQAWGERNNVTVISQTTGDSAAVCFDAVQAAKARGIDIVLADTA GRLPTQLHLMEEIKKVKRVLQKAMPDAPHEIIVVLDANIGQNAVNQVKAFDEALGLTGLI VTKLDGTAKGGILAALASDRPVPVRYIGVGEGIDDLRPFNARAFVDALLD >gi|289656342|gb|ADEA01000025.1| GENE 5 4374 - 5738 2187 454 aa, chain + ## HITS:1 COG:NMB1987 KEGG:ns NR:ns ## COG: NMB1987 COG0486 # Protein_GI_number: 15677815 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Neisseria meningitidis MC58 # 1 454 1 448 448 659 79.0 0 MSASQPTIAAIATAPGRGGVGVIRLSGKNLLPLAQTLSGGKTPKPRTALYTDFLGGDGQP IDNGILLYFAAPASFTGEDVVELQGHGGPVVMDMLLSRCLELGARMAQPGEFTKRAFLNN KLDLAQAESVADLIDASSKSAARMALRSLKGAFSRHIHELVDDLITLRMLVEATLDFPEE DIDFLEAADARGKLQALQGRLKTVLASAEQGAILREGMNVVLVGAPNVGKSSLLNALAGD DIAIVTDIAGTTRDTVREQITLDGVPVHIIDTAGLRETDDVVEQIGIERSRKAVSEADVA LILIDPREGVNAKTQAILNSLPAGLKKIEIHNKADLTGEPVAVRSGGLAQTGADTVISLS AKTGAGLDLLKHALLQEVGWQGESESLFLARSRHLNALHEAEAELENAALCDNNQIELFA EHLRLAQNACSEITGEFTADDLLGVIFSRFCIGK >gi|289656342|gb|ADEA01000025.1| GENE 6 5869 - 6114 441 81 aa, chain + ## HITS:1 COG:NMA0256 KEGG:ns NR:ns ## COG: NMA0256 COG5007 # Protein_GI_number: 15793274 # Func_class: K Transcription # Function: Predicted transcriptional regulator, BolA superfamily # Organism: Neisseria meningitidis Z2491 # 1 80 1 80 82 126 86.0 9e-30 MLTPQQVKSLIENVAECEHVEVEGDGHHFFAVIVSSAFEGKTRLARHRLIKDGLKTHLQS NELHALSISVAATPAEWAAKQ >gi|289656342|gb|ADEA01000025.1| GENE 7 6273 - 8444 3143 723 aa, chain + ## HITS:1 COG:NMA0220 KEGG:ns NR:ns ## COG: NMA0220 COG1289 # Protein_GI_number: 15793243 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis Z2491 # 1 715 1 716 716 1001 69.0 0 MRTPPLKPLIITSLPVFASVSAAAALVWYFDAPKLAMPFVLGIIAGGLVDLDNRLTGRLK NIIVTVILFSLASLLTQMTLGTGLPFILTMTAMTFCFTLLGAIGLRYRTFAFGALAVATY TTLTYTPETFWLTNPVMILFGTLLYSTCTLFFHIIFPHRPVQESVAAAYESLGGYFDAKA DFFDPDEAEWLGNRQIDLAMRNAGVIAAFNQCRAALFYRMRGQHRHPRTARMLRYYFVVQ DIHERASSAHVDYSELADRLKNTDLIFRIRRLLEMQGQACRNVAESLRSGRPYRYSKRLA RAMEGCRQSLEVYAEQHSGSDVHNLRQLLNNLGSVDHQLRHLANNDSATALEGESDATRI ANPENNGLKNVWQTIRSQLNLESPVFRHAVRLSILVAAACTIVGVFRLTLGYWILLTAIF VCQPNYSATKSRVYQRIAGTVLGVVVGSLVPYFTPSVETKLWIVIACTTLFFMSRSYKYS FSTFFITIQALTSFSLAGLDVYSAMPIRIIDTVIGAVLAWAAVSYLWPDWRYLTLDRTSA QAVQSNGAYLRAILDQLKNGSADDVGYRTIRRRAYESTAALSSTLSDMSGNPEKYGSRLQ DGFTLLKTGYALTGNISALGAYRSQMAQDCGDSFAEGFYRAAYQTADLLEHMPQADESAF QTALSDIRAGLEALRGQIPDNRQSYVLWQQLSLIVRQLAPCHQALARLKRPTASATANTA KAV >gi|289656342|gb|ADEA01000025.1| GENE 8 8519 - 9235 1035 238 aa, chain + ## HITS:1 COG:NMA0410 KEGG:ns NR:ns ## COG: NMA0410 COG2227 # Protein_GI_number: 15793415 # Func_class: H Coenzyme transport and metabolism # Function: 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase # Organism: Neisseria meningitidis Z2491 # 3 238 2 237 238 388 76.0 1e-108 MTAENQRNVDDDEIAKFSQIADKWWDKNGEFKPLHDINPLRLNYIDRLAPLAGKRVLDVG CGGGILSESMAKRGAAHVTGIDMAEKSLQTAQTHAAAQKVGNIAYRCVRVEDLAAEAPHS FDVVTCMEMMEHVPDPAAIVKACAKLVKPDGTVFFSTINRNPKSYLHLIVGAEYVLNFVP KGTHDWHKFITPAELARMCRQVGLDVADTKGLKYNLLTRQFSLDSRTDVNYMIACRPA >gi|289656342|gb|ADEA01000025.1| GENE 9 9316 - 9942 654 208 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298369778|ref|ZP_06981095.1| ## NR: gi|298369778|ref|ZP_06981095.1| periplasmic protein [Neisseria sp. oral taxon 014 str. F0314] # 1 208 1 208 208 346 100.0 6e-94 MKPIFPRLLLALGLCSAVLAAQAEIFICEVDDHAVFTQKKQGKNCSVSKMEGSADVPAEV AASAVPETVNLQERLGAVASEVDDIKILPSSGARSVTNTSDAANPRLDIRLRDGTMLDEK SAKAKADELNRRAKIVPAPIIMPKPKVQLTRKQILQNEIRNEQTALVRAKAQLNVATKKG DQAKITRLTQAIRDREANIRAIQNEMGR >gi|289656342|gb|ADEA01000025.1| GENE 10 10000 - 10647 598 215 aa, chain - ## HITS:1 COG:NMB2018 KEGG:ns NR:ns ## COG: NMB2018 COG0564 # Protein_GI_number: 15677843 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthases, 23S RNA-specific # Organism: Neisseria meningitidis MC58 # 1 203 3 204 220 270 63.0 1e-72 MLEILFRNQDFAAVDKPAGIAVHQEEGADNLLAMAAAQLNVPRLWLTHRLDKPTSGVLLL ALNAQAASELAQQFAAKTMRKTYLALSDRRPAKKQGLVKGGMEKSRRGAWKLTRGDGANL AVTRFHSQSIAPNLRLFVLQPQTGKTHQLRVAMKNLSSPILGDTLYGGTPAERLFLHAWR LEFEYRGGAFSVCAPLDGRWPSEIPGTFRAPAVGL >gi|289656342|gb|ADEA01000025.1| GENE 11 10660 - 11232 728 190 aa, chain - ## HITS:1 COG:RSc2100 KEGG:ns NR:ns ## COG: RSc2100 COG2119 # Protein_GI_number: 17546819 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Ralstonia solanacearum # 1 186 15 203 204 166 50.0 2e-41 MEAFLSSTLSVAAAEIGDKTQLLSLFLAARFAQKNAIVAGIFIATLLNHLVSAVFGVWLA QELSPDVAKWAVGISFIAVGLWLLLPDKDEDPGSRWLKYGAFSATVILFFMAEIGDKTQI ATVLLAAKYQELFMVVTGSVIGMMAANVPVVYLGEMLTKKIPAKKVRLAACVVFCALGVL TLLGGGLVFR >gi|289656342|gb|ADEA01000025.1| GENE 12 11510 - 12793 697 427 aa, chain - ## HITS:1 COG:no KEGG:ACIAD0355 NR:ns ## KEGG: ACIAD0355 # Name: not_defined # Def: hypothetical protein # Organism: Acinetobacter_ADP1 # Pathway: not_defined # 8 407 20 417 435 228 34.0 3e-58 MKKTLTPKLQKIQMQLDSISASFRRHMAAENYAQAAADAMRAHKLIPASVVPLSDAATAA VKGGLWDDAIIYAKKALQRDPKHINSLDALSHAYGGKDDWENVRIYGLQALQLRDGKIAA RPRPPLSLPTFKPDGKKIISFSLFGGSSAYIEPAVLNAETAKDIYPEWTCRFYVDDSVPD TAIGRLKSNGAEIIRVDVEEAQWPGTMWRFLAADDAEASWVIFRDADSVISHREAEAVKE WMASGKLFHTMRDAETHTELILAGLWGMAAGTVPDMKGKIRTYLQQPLVSKHFADQFFLR EHIWAYARQSLFAHDRIFGFLDAKPFSDGLMTDYRYNHIGCDEGNSHFQADYDLPDGSEV VWKLYSRIAPLLTPSADIRTLPEERLVCEYRTTVNNGKISGYIPRRYSKGFAQGLSRMVV VRAEEAE >gi|289656342|gb|ADEA01000025.1| GENE 13 12874 - 13917 669 347 aa, chain - ## HITS:1 COG:NMA2180 KEGG:ns NR:ns ## COG: NMA2180 COG0722 # Protein_GI_number: 15795051 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Neisseria meningitidis Z2491 # 1 347 1 347 351 597 82.0 1e-171 MNYLYQTDDVKIKEVKELLPPIAHLYNLPISEAASGLVHRTRHEIADLIHGKDNRLLVII GPCSIHDPEAALEYAEKLLPLRKKYEQELLIVMRVYFEKPRTTVGWKGLINDPHINGTFD INFGLHQARKLLLALNDMGMPASTEFLDMITPQYYADLISWGAIGARTTESQVHRELASG LSCPVGFKNGTDGNLKIAIDAIGAAGHPHHFLSVTKTGHSAIVHTAGNADCHVILRGGKE PNYDSEHVRAAAQELAKAGMPTKMMVDCSHANSRKDFRRQKEVAQDIADQLAAGENDIMG VMVESHLVEGRQDKPEVYGQSITDACIGWDTTEEVLELLAKANRHRV >gi|289656342|gb|ADEA01000025.1| GENE 14 14122 - 14265 60 47 aa, chain + ## HITS:1 COG:NMA0907 KEGG:ns NR:ns ## COG: NMA0907 COG4105 # Protein_GI_number: 15793873 # Func_class: R General function prediction only # Function: DNA uptake lipoprotein # Organism: Neisseria meningitidis Z2491 # 1 46 221 266 267 79 73.0 1e-15 MELAYKKLGKPQLAADSRRILAGNFPASPYLQKPWRPDDMPWWRYWR >gi|289656342|gb|ADEA01000025.1| GENE 15 14371 - 14547 64 58 aa, chain - ## HITS:1 COG:NMB2017 KEGG:ns NR:ns ## COG: NMB2017 COG1555 # Protein_GI_number: 15677842 # Func_class: L Replication, recombination and repair # Function: DNA uptake protein and related DNA-binding proteins # Organism: Neisseria meningitidis MC58 # 1 57 88 148 148 64 62.0 5e-11 PAKAKAIVAYRQQNGQFKTVEDLKKVKGIGEGIFSKLKDEASVAPPAAKKAVPAVKQQ Prediction of potential genes in microbial genomes Time: Thu May 26 13:36:04 2011 Seq name: gi|289656341|gb|ADEA01000026.1| Neisseria sp. oral taxon 014 str. F0314 cont1.26, whole genome shotgun sequence Length of sequence - 47694 bp Number of predicted genes - 42, with homology - 41 Number of transcription units - 26, operones - 11 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) - 5S_RRNA 149 - 205 91.0 # AE015927 [R:2797299..2798807] # 5S ribosomal RNA # Clostridium tetani E88 # Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium. + Prom 315 - 374 8.7 1 1 Tu 1 . + CDS 600 - 1787 1122 ## COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase + Term 1799 - 1847 16.1 - Term 1782 - 1841 20.1 2 2 Op 1 18/0.000 - CDS 1851 - 2777 1365 ## COG1159 GTPase 3 2 Op 2 . - CDS 2840 - 3559 742 ## COG0571 dsRNA-specific ribonuclease + Prom 3692 - 3751 4.4 4 3 Op 1 2/0.286 + CDS 3771 - 4094 542 ## COG4859 Uncharacterized protein conserved in bacteria 5 3 Op 2 17/0.000 + CDS 4176 - 4655 972 ## COG0054 Riboflavin synthase beta-chain 6 3 Op 3 . + CDS 4738 - 5166 742 ## COG0781 Transcription termination factor + Term 5219 - 5260 9.6 - Term 5207 - 5248 10.4 7 4 Op 1 . - CDS 5277 - 5903 872 ## gi|298369792|ref|ZP_06981108.1| transcriptional regulator (TetR family) - Prom 5923 - 5982 2.9 8 4 Op 2 . - CDS 6054 - 6164 92 ## - Prom 6184 - 6243 5.3 + Prom 6135 - 6194 10.6 9 5 Op 1 . + CDS 6308 - 8353 3497 ## COG1629 Outer membrane receptor proteins, mostly Fe transport + Prom 8412 - 8471 1.5 10 5 Op 2 . + CDS 8615 - 9013 682 ## gi|298369794|ref|ZP_06981110.1| extensin (Proline-rich glycoprotein) - Term 8961 - 8990 1.1 11 6 Tu 1 . - CDS 9070 - 9918 781 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 10022 - 10081 4.8 12 7 Tu 1 . - CDS 10435 - 11472 1080 ## COG0286 Type I restriction-modification system methyltransferase subunit - Prom 11539 - 11598 1.7 13 8 Tu 1 . - CDS 11613 - 11924 276 ## NMCC_0191 hypothetical protein - Prom 11951 - 12010 3.2 + Prom 12231 - 12290 6.7 14 9 Tu 1 . + CDS 12313 - 13074 300 ## MAE_35520 hypothetical protein + Term 13080 - 13122 5.4 - Term 13068 - 13108 4.1 15 10 Tu 1 . - CDS 13119 - 13397 301 ## COG0863 DNA modification methylase - Prom 13524 - 13583 5.5 16 11 Tu 1 . - CDS 14100 - 16676 3376 ## COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases - Prom 16707 - 16766 4.5 17 12 Tu 1 2/0.286 - CDS 16963 - 18039 1610 ## COG0216 Protein chain release factor A - Term 18045 - 18084 8.0 18 13 Op 1 . - CDS 18126 - 18923 657 ## COG0084 Mg-dependent DNase 19 13 Op 2 . - CDS 18937 - 20130 1428 ## COG0477 Permeases of the major facilitator superfamily - Prom 20241 - 20300 5.0 + Prom 20324 - 20383 3.2 20 14 Tu 1 . + CDS 20510 - 22039 2289 ## COG0433 Predicted ATPase + Term 22052 - 22106 17.1 - Term 22262 - 22305 12.0 21 15 Op 1 9/0.000 - CDS 22323 - 24596 3432 ## COG0620 Methionine synthase II (cobalamin-independent) 22 15 Op 2 . - CDS 24652 - 25533 1383 ## COG0685 5,10-methylenetetrahydrofolate reductase - Prom 25565 - 25624 9.5 23 16 Op 1 9/0.000 - CDS 25648 - 25845 338 ## COG2975 Uncharacterized protein conserved in bacteria 24 16 Op 2 . - CDS 25929 - 26270 554 ## COG0633 Ferredoxin 25 16 Op 3 . - CDS 26360 - 26722 512 ## SSA_1320 hypothetical protein 26 16 Op 4 . - CDS 26801 - 28663 2947 ## COG0443 Molecular chaperone - Prom 28697 - 28756 3.8 - Term 28831 - 28875 11.5 27 17 Tu 1 . - CDS 28906 - 31275 3198 ## COG3957 Phosphoketolase - Prom 31430 - 31489 5.6 - Term 31544 - 31604 10.1 28 18 Op 1 3/0.000 - CDS 31646 - 32341 873 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) 29 18 Op 2 . - CDS 32343 - 33155 482 ## COG0169 Shikimate 5-dehydrogenase - Prom 33184 - 33243 5.9 + Prom 33341 - 33400 6.7 30 19 Tu 1 . + CDS 33554 - 34972 2181 ## COG0174 Glutamine synthetase + Term 34999 - 35053 19.0 + Prom 35247 - 35306 3.2 31 20 Op 1 . + CDS 35451 - 36086 433 ## gi|298369816|ref|ZP_06981132.1| pilus biogenesis protein 32 20 Op 2 10/0.000 + CDS 36119 - 36844 867 ## COG3121 P pilus assembly protein, chaperone PapD 33 20 Op 3 5/0.000 + CDS 36831 - 39299 2968 ## COG3188 P pilus assembly protein, porin PapC 34 20 Op 4 . + CDS 39290 - 40414 918 ## COG5430 Uncharacterized secreted protein + Term 40596 - 40647 15.5 - Term 40582 - 40636 16.1 35 21 Tu 1 . - CDS 40644 - 41681 1144 ## COG0042 tRNA-dihydrouridine synthase - Prom 41857 - 41916 6.0 + Prom 41586 - 41645 4.8 36 22 Tu 1 . + CDS 41779 - 42936 513 ## COG0582 Integrase + Term 42938 - 42991 15.1 37 23 Op 1 . - CDS 42981 - 43490 307 ## NMC0878 putative integral membrane protein 38 23 Op 2 . - CDS 43483 - 43953 305 ## COG3772 Phage-related lysozyme (muraminidase) - Prom 44074 - 44133 2.6 - Term 44209 - 44260 1.6 39 24 Tu 1 . - CDS 44278 - 44703 474 ## NMO_0807 putative phage associated membrane protein - Term 44713 - 44748 6.5 40 25 Op 1 . - CDS 44765 - 45133 402 ## NMC0873 hypothetical protein - Term 45147 - 45180 6.1 41 25 Op 2 . - CDS 45188 - 45595 131 ## gi|298369827|ref|ZP_06981143.1| hypothetical protein HMPREF9016_01161 - Prom 45818 - 45877 3.4 - Term 46540 - 46575 7.4 42 26 Tu 1 . - CDS 46581 - 47435 665 ## NMC0870 hypothetical protein Predicted protein(s) >gi|289656341|gb|ADEA01000026.1| GENE 1 600 - 1787 1122 395 aa, chain + ## HITS:1 COG:NMB1658 KEGG:ns NR:ns ## COG: NMB1658 COG0452 # Protein_GI_number: 15677507 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantothenoylcysteine synthetase/decarboxylase # Organism: Neisseria meningitidis MC58 # 1 394 1 392 394 575 75.0 1e-164 MNKHILLGISGGIAAYKSCELVRRLKKAGHSVTVAMSRSAAEFVSPLTFQALSGNPVLSD THDGEGTGKNGMAHINLTREADVFLIAPATANTVAKIANGIADSLLTNLAAARKCPLAVA PAMNVEMWFNPANQRNIRQLVSDGITVFQPDSGEQACGETGVGRMPEAAELADLLPDLWT PKVLNGKKVLITAGATFEAIDPVRGITNISSGRMGMALAAACRAAGAQVTLVYGQLQTAV PAGLAHTVQAVSAEEMYRAVHGCIASQDIFISVAAVADYKVKNSSNQKLKKDGTGTPPVI ELVENPDILASVAALPNPPFCVGFAAESENVLEHARAKRLKKNVPMLVANQVSQAMGKAT NQITIIDDRQETSFPESDKRRAAEEIVKRLAELLG >gi|289656341|gb|ADEA01000026.1| GENE 2 1851 - 2777 1365 308 aa, chain - ## HITS:1 COG:NMB0687 KEGG:ns NR:ns ## COG: NMB0687 COG1159 # Protein_GI_number: 15676585 # Func_class: R General function prediction only # Function: GTPase # Organism: Neisseria meningitidis MC58 # 1 308 18 324 324 497 88.0 1e-140 MDIETFLNNESGRAAGYRCGFIAIVGRPNVGKSTLMNHLIGQKISITSKKAQTTRNRVTG IYTDDTAQFVFVDTPGFQTNHRNALNDRLNQNVTEALSGVDAVVFVVEAMRFTEADRTVI KQLPKHTPVILVVNKIDKGKADKYRLEAFIREVGAEFEFAGHEAVSAKHGLGIARLLERL KPYLPESVPMYPEDMVTDKSGRFLAMEIVREKLFRYLGEELPYAMNVEVEQFEEEPSGLY RIYIAVLVDKDSQKAILIGKGGERLKKISTEARLDMEKLFDTKVFLKVWAKVKSGWADDV RFLRELGL >gi|289656341|gb|ADEA01000026.1| GENE 3 2840 - 3559 742 239 aa, chain - ## HITS:1 COG:NMB0686 KEGG:ns NR:ns ## COG: NMB0686 COG0571 # Protein_GI_number: 15676584 # Func_class: K Transcription # Function: dsRNA-specific ribonuclease # Organism: Neisseria meningitidis MC58 # 1 239 1 239 239 339 77.0 3e-93 MKPDLVRQQAHQAIQRRLGHKFVRIELLQQALTHRSFNAKNNERFEFVGDAILNYSIAKM LFDAFPKLTEGELSRLRANLVNEHVLAEIALEMNIGDGLYLGAGELKSGGFRRPSILADA MEAMFAAVSFDAGFAAAEEVVRHLFAERVKRVDFKNQGKDNKTVLQEALQARHLPLPKYR IEEQVGGVKDSRFVVSCDLGELGFICRAQGTNRKAAEQEAAAEALIWLERQLPLKKNKK >gi|289656341|gb|ADEA01000026.1| GENE 4 3771 - 4094 542 107 aa, chain + ## HITS:1 COG:NMB0685 KEGG:ns NR:ns ## COG: NMB0685 COG4859 # Protein_GI_number: 15676583 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 1 107 1 107 107 136 64.0 1e-32 MNTFAQALSHALDRCIAARTVYNQGDAVGFLYREEPVFEHDSGWRFFSGEESDEYAADPA NFTVCSVSEIVQANPAVAPLLEQPAGGAWEADGEGGFRTVDDWQPQD >gi|289656341|gb|ADEA01000026.1| GENE 5 4176 - 4655 972 159 aa, chain + ## HITS:1 COG:NMA0886 KEGG:ns NR:ns ## COG: NMA0886 COG0054 # Protein_GI_number: 15793855 # Func_class: H Coenzyme transport and metabolism # Function: Riboflavin synthase beta-chain # Organism: Neisseria meningitidis Z2491 # 1 158 1 158 158 241 82.0 3e-64 MNIIRPNLDGSRLRIGIVQARFTNEIGSKMLEVCCRTLKELGVADENITAATVPGALEVP LVLQNMAASNQYDALVAIGVVIRGETYHFELVSNESGAGVTRVGLDHNIPIANAILTTEN DDQAVARIEEKASDAAKVAVECANLVNLLLEEQFNEEDE >gi|289656341|gb|ADEA01000026.1| GENE 6 4738 - 5166 742 142 aa, chain + ## HITS:1 COG:NMB0683 KEGG:ns NR:ns ## COG: NMB0683 COG0781 # Protein_GI_number: 15676581 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Neisseria meningitidis MC58 # 1 140 1 140 141 216 79.0 9e-57 MKTPRRRARELAVQALYQAAVNNIPAAEAAKNIREMAEFGKADEGLFNKLVIGTADNAAA YMQQIRPLLDRDEKDLSPIERAVLLMACHELSAMPETPYPVIINEAIEVTKTFGGTDGHK FVNGILDRLAVQLRPNDPKRGA >gi|289656341|gb|ADEA01000026.1| GENE 7 5277 - 5903 872 208 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298369792|ref|ZP_06981108.1| ## NR: gi|298369792|ref|ZP_06981108.1| transcriptional regulator (TetR family) [Neisseria sp. oral taxon 014 str. F0314] # 1 208 1 208 208 351 100.0 1e-95 MKTLYEQNQNLPTVMTASKQQTIADTARRLFREHGFSAVSVGGICAEAAVSRVTFYKYYS GKNALLQEIVTEQKNRVRAEFEALLARQCNLREAAEAVFALQRQSFDELYSAAFLRDIEE NTDLELERFFHELNEEKYAFMRSFFHTLQQRRLIQPDLPVELIDLFIRQADVLMRHPQLA ALYAVAPQKLPQDILGLLLHGLAGEKDE >gi|289656341|gb|ADEA01000026.1| GENE 8 6054 - 6164 92 36 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQVFIIHFTSPLFIVNHLKNNSLSRSAGEGWGRAIL >gi|289656341|gb|ADEA01000026.1| GENE 9 6308 - 8353 3497 681 aa, chain + ## HITS:1 COG:VC2211 KEGG:ns NR:ns ## COG: VC2211 COG1629 # Protein_GI_number: 15642209 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Vibrio cholerae # 2 681 15 687 687 473 38.0 1e-133 MQKHTLRRLPLLIAAAFASEWIYAADAAQDAEQVQLEEVVVTGERTNRSGFETATSNRVF TTPNIDRSGHNLSATDLLKQTVNTVDLGSGNDLPTVRGVDGSGPAVGAVAFFAGTRPRLN LSIDGRSATYNEYAFGTQSLWDMQQVEVLRGPQSHVRGQNAVAGAVVMRSKDPTDEWEGA LRLGLGNQKTRNIAGVVSGPIVKNNLAFRLSAERQQRESYEPFVSYEPTGNPRRVENTNV RFKLLLTPENHPDFYSRLTLNHIRSRAPQNEIMGNTASRRFLKEKPVFVTGSTSGIWDVS WQLNDYLKLENKLVYGRYHNERLHLPMTVSPQGVPAELKGRELQWEPVLHFSNKGRLKGL AGLHYFRSKQDEWVDIRSVGGRNTFDDRNSVRALFAETTYSPSEKWDITAAARLEKETHK RSGGSGVLHLDLDKGQTVFLPKIDIAFKPTDQWVSGIKAARGYNPGGAGITFGRPVVTYT YEPEYVNNYEWYTRWRSADRRLQLSGNLFLNHYRDMQLPFYLGTNSVVIRNAKKVHTYGA ELAADWQATDSLKLTTGLGLLNTKIKSYPNSGIEGNKLGRAPKYTANIGVKYLNDKGWEA GGDVRFYGGYYSAADNAESGKIGAYNQVNLYTAYNFKQGRISLYADNVFNRRRPIFISSA DRQDALYQRPRSVGVSAEWKF >gi|289656341|gb|ADEA01000026.1| GENE 10 8615 - 9013 682 132 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298369794|ref|ZP_06981110.1| ## NR: gi|298369794|ref|ZP_06981110.1| extensin (Proline-rich glycoprotein) [Neisseria sp. oral taxon 014 str. F0314] # 1 132 41 172 172 257 100.0 1e-67 MHYFTPAKTLPEGTIYLTDLTHVADFSDWLSEFETLLNQNRRFATVCTPMRRQVSDEQRI ADRKTYIEWIKAHRPQLAERCAAMLLIEPDAAQLAFFREQSSKLAPALGVNYIVEADEQT ALLRAEEALKAV >gi|289656341|gb|ADEA01000026.1| GENE 11 9070 - 9918 781 282 aa, chain - ## HITS:1 COG:AGc468 KEGG:ns NR:ns ## COG: AGc468 COG0697 # Protein_GI_number: 15887623 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 6 280 9 283 287 194 46.0 2e-49 MPNRTAAIFTTAIAPLIWGSTYLVTTEFLPPNRPFTAALIRVLPAGLLLLAWTRRIPKRS EWPTVVLLGFLNIGFFQAMLFVAAYRLPGGLAAVLSSTQTLMVLVFTWLIDKTMPPKAAW AWSATGVLGIAMLVLSPSARYDGTGILAALSGAAAMALGVYLSKHKKTSLPVLAFTGWQL FIGGVFLLPVALLAEPPLESLSPANIGGYLYLCLFGAVFAYVLFFNGIVKLSPAAVSSLG LLSPVSAFVLGWLFLGQGMDAKSLSGFALVLVSIFGVQKAVR >gi|289656341|gb|ADEA01000026.1| GENE 12 10435 - 11472 1080 345 aa, chain - ## HITS:1 COG:jhp0415 KEGG:ns NR:ns ## COG: jhp0415 COG0286 # Protein_GI_number: 15611483 # Func_class: V Defense mechanisms # Function: Type I restriction-modification system methyltransferase subunit # Organism: Helicobacter pylori J99 # 5 343 215 542 543 297 48.0 2e-80 MARIMADILVPAEVRGQIRSVDVYDPSAGSGTLLMNVAHAIGEDKCMIYTQDISQKSSNL LRLNLILNNLVHSLNNVVHGNTILSPAHKDASGRLKKFDFIVSNPPFKLDFSAYRDQLEG EENRERFFAGIPKTPNHEDKIKEKESRKKMPIFLLFIQHILFSLKENGKAAIVLPTGFIT AQSGIDKRIREYLVENKMLAGVVSMPSNIFATTGTNVSILFIDKANKDEVVLIDASGLGE KIKDGKNQKTVLSRAEEQKICNTFTHKQAVEDFSVVVGYDEIKAKNYSLSAGQYFEVKID YVDISADEFAQKMAEFSADLDKLFTESAELEKEIKEKLQTLKFNG >gi|289656341|gb|ADEA01000026.1| GENE 13 11613 - 11924 276 103 aa, chain - ## HITS:1 COG:no KEGG:NMCC_0191 NR:ns ## KEGG: NMCC_0191 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_053442 # Pathway: not_defined # 1 69 1 69 70 132 86.0 4e-30 MSGIYLPRLFPPHIAKRGLLYFQQGKVRDIQKTSAGRYRAQVCGSENYWVWQKLDSDLYI KDGFCDCPYGGACKHMAALWYAVHAQTPDGQPDEIDAMIFAAR >gi|289656341|gb|ADEA01000026.1| GENE 14 12313 - 13074 300 253 aa, chain + ## HITS:1 COG:no KEGG:MAE_35520 NR:ns ## KEGG: MAE_35520 # Name: not_defined # Def: hypothetical protein # Organism: M.aeruginosa # Pathway: not_defined # 76 238 6 171 188 169 50.0 1e-40 MEIIHTFGQNVRLMRTQRNISQELLAEKSGLHRTYIGSVERGERNITLKNAEKIAKALGT SLIILFSLEINTMSMIDEQLIDLMKRYQLSFNHKRHSEFNNENDILMNAFGISPELKRQN PQYWGRELGMLWQLLVINSCSHLEAFKPALKIGNDEPCDLRIDQYAIDTKYRVGSGDSGT LKKFRLYANLLKEQGYEPVVLFLREDNLIHAERAFSDWIIYKGQESFDFIKQISGYDLKN FLEQAAFQYQIIR >gi|289656341|gb|ADEA01000026.1| GENE 15 13119 - 13397 301 92 aa, chain - ## HITS:1 COG:Ta1168 KEGG:ns NR:ns ## COG: Ta1168 COG0863 # Protein_GI_number: 16082180 # Func_class: L Replication, recombination and repair # Function: DNA modification methylase # Organism: Thermoplasma acidophilum # 24 89 205 268 381 58 46.0 2e-09 MKNGGFRSNIIENIKKDAPLDFNIHTTIKPLDLMINLLDIFVPKNENAIVLDPFSGSGTT LVAAKKMGINFLGIEIEPKYIEIINKRLELSQ >gi|289656341|gb|ADEA01000026.1| GENE 16 14100 - 16676 3376 858 aa, chain - ## HITS:1 COG:HP0464 KEGG:ns NR:ns ## COG: HP0464 COG0610 # Protein_GI_number: 15645092 # Func_class: V Defense mechanisms # Function: Type I site-specific restriction-modification system, R (restriction) subunit and related helicases # Organism: Helicobacter pylori 26695 # 5 752 3 796 1055 491 38.0 1e-138 MSQTHNENSRVKIPAVLHLMRLGYDYLSLKNENWDKQTNIFPEIFIESLCRINPDLSPDD ARRLLTDITIELDNEDLGQKFYERLTNQSGGKKLIDFQNFDNNSFHVVTELPCINGDEEF RPDITLLVNGMTLVFIEVKKPNNKGGIGEERERMGKRAKNPKFRRFINITQFMIFSNNME YDDGATEPAQGAFYASSAYGKPVFNYFREEHKLNLAELLNTLSDDLENNVLQDNNLPVIK HSPEFISNKSPDTPTNRILTSLLCRERLAFLLQHGLTYVKASQGALQKHIMRYPQLFATL AIEKHLVNGGKKGVIWHTQGSGKTALAYYNTRYLTHYYAKQGIVPKFYFIVDRLDLLKQA QREFTARDLVVHTIDSREAFAVDIKSAQTLHNHAGKAEITVVNIQKFQDDPNVVARNDYD LAIQRVYFLDEVHRSYNPKGSFLANLNQSDVNAVKIGLTGTPLIGVTAGNVNTRELFGDY IHKYYYDASIADGYTLRLIREAISSQYKAQLQEALAQLEVEKGSFDRKEIYAHPHFVRPM LDYILDDFAKFRKTNQDESLGAMVVCDSAEQARQLFDHFQTASDHNLTATLILHDVGTKD ERDQWVKDFKAGKTDILFVYNMLLTGFDAPRLKKLYLGRLIKAHNLLQTLTRVNRTYKSY RYGYVVDFADIECEFDKTNRAYWDELSNELGDEIGSYSQLFKTAEEIEQEIADIKNALFD FDTENAEEFCSQISQIADKKQLLALKKALQTLLAAGFATRTPWAQWPRLPIYLKAMTLRL EKYSGNPSRDAAREADIQELEQMWQEKTDSLVKQGQPVSDDLAAFRWMIEELRVSLFAQE LKTPYPVSVKRLLKVWNE >gi|289656341|gb|ADEA01000026.1| GENE 17 16963 - 18039 1610 358 aa, chain - ## HITS:1 COG:NMB1686 KEGG:ns NR:ns ## COG: NMB1686 COG0216 # Protein_GI_number: 15677534 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor A # Organism: Neisseria meningitidis MC58 # 1 358 1 358 358 627 98.0 1e-179 MKPSILEKLQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQLAQS DLADAEEMLSDPEMKDFAAEEIEAAKAKIDTLDTELQKLLLPKDADDDKNIFIEVRAGTG GDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESG GHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKT DSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGS GDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMDGDLEEITNALIAEHQAELLAAMGD >gi|289656341|gb|ADEA01000026.1| GENE 18 18126 - 18923 657 265 aa, chain - ## HITS:1 COG:NMB1687 KEGG:ns NR:ns ## COG: NMB1687 COG0084 # Protein_GI_number: 15677535 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Neisseria meningitidis MC58 # 1 252 1 254 256 331 63.0 1e-90 MKFTDTHCHLAEPALRQNLDRIIREARACGVWRFLVPATCRRDWYDVADLSLRPSENIRI ALGIHPWFAEETPEQDLAELESLLRRHPQAWVGEIGLDFYDKSQTAAQRECQQKLFVRQL VLAESLKRRVVVHNLKSSSAAAAAIVEAGFGQGGIIHAFSGSAEEASAFVRLGFKIGIGS LLLNPSARKIRKVVQALDLRDMVLETDSPFMLKNEVNTPANVRRIAETVAQLRGIAVEEV AAQTERNADGLLEYRKGLPDEPELI >gi|289656341|gb|ADEA01000026.1| GENE 19 18937 - 20130 1428 397 aa, chain - ## HITS:1 COG:NMA2040 KEGG:ns NR:ns ## COG: NMA2040 COG0477 # Protein_GI_number: 15794920 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Neisseria meningitidis Z2491 # 1 394 14 407 410 520 74.0 1e-147 MAVLMAMLVALMPFSVDAYLPAIPEMAQGLKADIHLIEQSLSTFMFGVAVGQVVGGSVSD IKGRRPVALVGLAVYLVSVLLLSMAQTGGQLLLLRMVQAFGAGMTVVVVGALVRDYYEGR EAAQMFALIGIIMMAVPLVAPMLGAELQKLGGWRAIFVFLLAYAVLLLGLMAGFLPKPAK TEKIGRDIFAVVAGRFKRVLQTRAAMGYLFFQAFSFSSMFVFLTESSFVYMKLYGVSPRL YAWMFGLNIITMATFNRITAWRLKTGTHPQAILKWGIIVQLGANLLMAVSAAAFDLPPFW LLVGCVMFSVGTQGLVSANTQACFMGYFKEEGGSANAVLGVCQSVIGASVGMLTTWLHNG TAQIMPFMMLASTVCGIILLRSCSHQAWKENSKAAGG >gi|289656341|gb|ADEA01000026.1| GENE 20 20510 - 22039 2289 509 aa, chain + ## HITS:1 COG:PM1435 KEGG:ns NR:ns ## COG: PM1435 COG0433 # Protein_GI_number: 15603300 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Pasteurella multocida # 11 505 11 498 499 610 65.0 1e-174 MTTFQIARAYGKTLEIQGKMANRHGLIAGATGTGKTVTLRRMAEAFSSEGVPVFLVDVKG DLSGIAQAGAASGKVGERIAEFGLGEQWLQSFPVRFWDVYGETGIPVRVTVSEMGPLLLA RLMNLNDTQEGLLNLVFKVADDKGWHILDLKDLRSMLKHVSDHASEYRTQYGNVSAASIG AIQRQLLTLENEGAEKFFGEPSLNLQDWMQTDNGKGVINVLNSEKLMRSPRMYSAFLLWM LAELFETLPEVGDLDKPKFVMFFDEAHLMFDNAANALVEQVEQVVRLIRSKGVGVYFVTQ NPLDLPDTILGQLGNRVQHALRAFTPRDQKAVKAAAETFRSNPNIKVAEAIAELGVGEAL VSFLDEKGMPEPVERALVLPPQSSLTPLVAEERNRLFQNDDLYPTYKDMVDNYSAFEALA EADSQAAAEKEAAAAAKEQEKAQKTAEKEAAKADPGILGGLLGGLSGGRKKSNQGIAYDL ADSVGSQINRQVTNAISRSIMGVIKNLLK >gi|289656341|gb|ADEA01000026.1| GENE 21 22323 - 24596 3432 757 aa, chain - ## HITS:1 COG:NMB0944 KEGG:ns NR:ns ## COG: NMB0944 COG0620 # Protein_GI_number: 15676837 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase II (cobalamin-independent) # Organism: Neisseria meningitidis MC58 # 1 757 1 758 758 1379 89.0 0 MTTLHFSGFPRVGAFRELKFAQEKYWRKELSEQELLDTAKGLREKNWKHQAAADADFVAA ADFTFYDHILDLQVATGAIPARFGFDSQKLTLEQYFQLARGNKDQFAIEMTKWFDTNYHY LVPEFHADTEFKANPAHYVQQLKEAQALGLKAKPTVVGPLTFLWLGKEKGSAFNRLDLLP KLLPVYAELLNALVEAGAEWIQIDEPALTLDLPEEWVAAYQNVYAALSKVNAKILLSTYF GSVAEHASLLKSLPVDGLHIDLVRAPEQLAAFADYDKVLSAGIIDGRNIWRADLDKALAV LEPLKAKLGDRLWISSSCSLLHTPYDLSVEEKLKANKPDLYSWLAFTLQKTQELKVLKAA LSDGREAVAAELAASRAAADSRANSSEIHRAEVAKRLADLPANADQRKSPFADRIKAQQA WLNLPPLPTTNIGSFPQTTEIRQARAAFKKGELSAADYEAAMKKEIAYVVEEQEKLDLDV LVHGEAERNDMVEYFGELLSGFAFTQYGWVQSYGSRCVKPPIIFGDVSRPEAMTVAWSTY AQSLTKRPMKGMLTGPVTILQWSFVRNDIPRATVCKQIALALNDEVLDLEKAGIKVIQID EPAIREGLPLKRADWDAYLNWAGEAFRLSSAGCEDSTQIHTHMCYSEFNDILPAIAALDA DVITIETSRSDMELLAAFGDFKYPNDIGPGVYDIHSPRVPAEAEIEHLLRKALDVIPAAR LWVNPDCGLKTRGWPETVAALENMVKVTKKLRAELAK >gi|289656341|gb|ADEA01000026.1| GENE 22 24652 - 25533 1383 293 aa, chain - ## HITS:1 COG:NMB0943 KEGG:ns NR:ns ## COG: NMB0943 COG0685 # Protein_GI_number: 15676836 # Func_class: E Amino acid transport and metabolism # Function: 5,10-methylenetetrahydrofolate reductase # Organism: Neisseria meningitidis MC58 # 1 292 1 292 292 555 89.0 1e-158 MSYARQINELNSSIADLNGNINVSFEFFPPKNEQMETMLWDSIRRLQTLRPKFVSVTYGA NSGERDRTHGIVKRIKQETGLDAAPHLTGIDATPDELRQIAKDYWDSGIRRIVALRGDKP AGYDKEPFYASDLVKLLREVADFDISVAAYPEVHPEAKSAQADLINLKRKIDAGANHVIT QFFFDVESYLRFRDRCVMMGIDAEIVPGILPVTNFKQLGKMAKVTNVKIPAWLAKMYEGL DDDQTTRNLVAASIAMDMVKVLLREGVKDFHFYTLNRSELTYAICHTLGIRPY >gi|289656341|gb|ADEA01000026.1| GENE 23 25648 - 25845 338 65 aa, chain - ## HITS:1 COG:NMA1347 KEGG:ns NR:ns ## COG: NMA1347 COG2975 # Protein_GI_number: 15794269 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 65 1 65 65 108 90.0 3e-24 MKWTDTRRIAEELYDLHGDSIDPRTVRFTQLRDLIMALPDFDDDPARCGERILEAVQQAW IEETE >gi|289656341|gb|ADEA01000026.1| GENE 24 25929 - 26270 554 113 aa, chain - ## HITS:1 COG:NMA1344 KEGG:ns NR:ns ## COG: NMA1344 COG0633 # Protein_GI_number: 15794267 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Neisseria meningitidis Z2491 # 1 113 1 113 113 194 93.0 2e-50 MPKITVLPHAVLCPEGAVIEDAPEGKTVLDVLLDHDIEVDHACEKSCACTTCHVIIRQGF DSLEEPTELEEDLLDQAWGLEADSRLSCQAVVADEDLVVEIPKYTINHAREEH >gi|289656341|gb|ADEA01000026.1| GENE 25 26360 - 26722 512 120 aa, chain - ## HITS:1 COG:no KEGG:SSA_1320 NR:ns ## KEGG: SSA_1320 # Name: not_defined # Def: hypothetical protein # Organism: S.sanguinis # Pathway: not_defined # 1 118 1 118 121 169 72.0 4e-41 MRLWHQTLIPLLPRAQLLGQHRECAALRGAGWGRPHATVNYVFTYSPDKLYLYHALIMEE MEKRGYKPDPLWKDPLYRGKTVVPYPAHDTEAADSPIYPEHDDAYLDECLENLKNKGIVL >gi|289656341|gb|ADEA01000026.1| GENE 26 26801 - 28663 2947 620 aa, chain - ## HITS:1 COG:NMA1340 KEGG:ns NR:ns ## COG: NMA1340 COG0443 # Protein_GI_number: 15794264 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Neisseria meningitidis Z2491 # 1 620 1 620 620 1005 90.0 0 MALLQISEPGMSAAPHQHRLAVGIDLGTTNSLVATVRSGSAACLPDKEGRVTLPSVVRYA ENGDMEIGYGALKAQKTDPVNTVSSAKRLIGRVLDDLSQERHYLPYRFGESGHIVELNTR QGAKTPIEVSSEILKALKSRAEETLGGDLVGAVITVPAYFDDAQRQATKDAARLAGLNVL RLLNEPTAAAIAYGLDNASEGTFVVYDLGGGTFDVSVLQLTKGLFEVKATGGNSALGGDD FDHRLFCHLLEQNDLSKLNERDSQLLLSLVRAAKEQLTGQTEAVVEATLSDGRKIHTVIT RQEFHHLTQNLVQKTIEPVKQALKDAGVTKADIKGVIMVGGSTRMLHVQQAVATFFGQTP LNNLNPDEVVALGAAIQANVLAGNKTDGEWLLLDVTPLSLGLETYGGLAEKIIPRNSTIP TARAQDFTTFKDGQTAMTIHVVQGERELVSDCRSLAKFTLRGIPPMTAGAARIRVTFQVD ADGLLSVSAQEQSTGVQAQIEVKPSYGLDDDTITQMLKDSMSNAAEDMAARARAEAVVEA ESLTDAVNAALELDSDLLDAEELQQIQQDIADLQGRLKDGNAEDIRAAVAKLSRSTDNFA AKRMNRNIQRALTGQSVDNI >gi|289656341|gb|ADEA01000026.1| GENE 27 28906 - 31275 3198 789 aa, chain - ## HITS:1 COG:CAC1343 KEGG:ns NR:ns ## COG: CAC1343 COG3957 # Protein_GI_number: 15894622 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoketolase # Organism: Clostridium acetobutylicum # 7 785 15 794 796 967 58.0 0 MSAQYDSADYLNKVDAWWRAANYISVAQMYLKDNPLLMRPIQASDVKAHPIGHWGTIAGQ NFIYAHLNRAINKYDLNMFYIEGPGHGGQVMVSNSYLDGSYSEIYPNITQDEAGLKQLCK IFSFPGGIASHAAPETPGSIHEGGELGYALSHAVGAVLDNPDVIAATVIGDGEAETGPLS AGWFSNVFINPVNDGAVLPILYLNGGKIHNPTILARKSDESLRLYFEGLGWDPIFVEATD YATTHKVMAQKLDEAIEKIKAIQTKARAGKAEEAVMPKWPVLVARLPKGWTGPKVWNGEP IEGGFRAHQVPIPASSHDMATVDSLVEWLKSYRPEELFDANGTFKAELREISPKGDRRMS TNPITNGGINPRPLNTADWKKFALDNSDRGSIMAQDMIEFGKYAAELVKANPDNFRIFGP DETKSNRMNEVFKVTNRQWLEPIDKAYDEWMSPAGRVIDSQLSEHQAEGFLEGYVLTGRH GFFASYESFLRVVDSMATQHFKWLRKCKTHAPWRKSYPSLNLIATSTVFQQDHNGYTHQD PGMLTHLAEKKPEFIREYLPADANSLLAVMSEVLSSKDKVNLIVSSKHPRPQFYSAAEAE ELVREGYKVIDWASTDKGGEPDVVIAAAATEPNLEALAAITILNKQFPELKIRFINVVDI LKLRHPKVDPRGLTDEQFDALFTKDKPVIFCFHGYEGMVRDIFFDRHNHNLRIHGYRENG DITTPFDMRVLSEMDRFHVAKDAALAVYGDKAQDFAKKMDDTLAFHHSYIRENGEDIPEV RNWKWEALK >gi|289656341|gb|ADEA01000026.1| GENE 28 31646 - 32341 873 231 aa, chain - ## HITS:1 COG:NMA2130 KEGG:ns NR:ns ## COG: NMA2130 COG0744 # Protein_GI_number: 15795001 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Neisseria meningitidis Z2491 # 1 231 1 231 233 387 83.0 1e-107 MFRIIKWLIALPVGVFIFFNAYVYGNIITYRAVAPYQTAFMSMRMKQFAQEGSDVPLDYR WVSYNQISPNLKKALIASEDAKFAEHAGFDWGGIQYAIKRNRKTGKVKAGGSTISQQLAK NLFLNESRSYIRKGEEAAITAMMEAVTDKDRIFELYLNSIEWHYGVFGAEAAAQKFFHKP AANLSRQQAASLAARVPAPLFYANNPKSKRLRAKTNIILRRMGSAELPDTE >gi|289656341|gb|ADEA01000026.1| GENE 29 32343 - 33155 482 270 aa, chain - ## HITS:1 COG:NMB0358 KEGG:ns NR:ns ## COG: NMB0358 COG0169 # Protein_GI_number: 15676273 # Func_class: E Amino acid transport and metabolism # Function: Shikimate 5-dehydrogenase # Organism: Neisseria meningitidis MC58 # 2 269 1 268 269 337 65.0 1e-92 MMNDKPRYAVIGNPVAHSRSPEIHRQFAAQECVEIEYVRICAEIGGFVQAAERFFAEGGQ GANVTVPFKTDAFDWVDEHSERAAAAGAVNTVIPLGGGRFLGDNTDGAGLVGDMVRQGVS PKGKHILLLGAGGAVRGVLPSLLDERPASVTVANRTPEKARALAGRFGVQTALMQDLTAG YFDVVINGTSCGLSGQLPDIASAVFGKCGLAYDMVYGKGAKPFLDFARRSGAAKTADGLG MLVGQAAVSYRLWRGFEPDAVSVIEYMRGR >gi|289656341|gb|ADEA01000026.1| GENE 30 33554 - 34972 2181 472 aa, chain + ## HITS:1 COG:NMA2128 KEGG:ns NR:ns ## COG: NMA2128 COG0174 # Protein_GI_number: 15794999 # Func_class: E Amino acid transport and metabolism # Function: Glutamine synthetase # Organism: Neisseria meningitidis Z2491 # 1 472 1 472 472 951 98.0 0 MSIKNAVRLIEESEARFVDLRFTDTKGKQHHFTVPARIVLDDPEEWFENGQAFDGSSIGG WKGIQASDMQLRPDPATAFIDPFYDDTTVVLTCDVIDPADGQGYDRDPRSIARRAEAYLK SSGIGDTAYFGPEPEFFVFDGVEFETDMHKTRYEITSESGAWASGLHMDGQNTGHRPAVK GGYAPVAPIDAGQDLRSAMVNILEELGIEVEVHHAEVGTGSQMEIGTRFATLVKRADQTQ DMKYVIQNVAHNFGKTATFMPKPIMGDNGSGMHVHQSIWKDGQNLFAGDGYAGLSDTALY YIGGIIKHAKALNAITNPSTNSYKRLVPHFEAPTKLAYSAKNRSASIRIPSVNSSKARRI EARFPDPTANPYLAFAALLMAGLDGIQNKIHPGDPADKNLYDLPPEEDALVPTVCASLEE ALAALKADHEFLLRGGVFSKDWIDSYIAFKEEDVRRIRMAPHPLEFEMYYSL >gi|289656341|gb|ADEA01000026.1| GENE 31 35451 - 36086 433 211 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298369816|ref|ZP_06981132.1| ## NR: gi|298369816|ref|ZP_06981132.1| pilus biogenesis protein [Neisseria sp. oral taxon 014 str. F0314] # 1 211 1 211 211 342 100.0 6e-93 MKTRFTLTALALTSALAFSTSAMAASNPATGEFNVTIKLTGVCEVETNSGLTTAINSDNH ASAGADINFGTHEAQANSALITGKSTAGTGEGLNIKCSKNTPFSIGLLPQNSGATTAGAG VMTGVNLNGGSHSDTVKYQLYQPATSAGAIADNGSHTSKPWGNDKGTNTVDLIGKGLNDV IKVPVYADVPAGELDKTPDRYQDRVTVSVSY >gi|289656341|gb|ADEA01000026.1| GENE 32 36119 - 36844 867 241 aa, chain + ## HITS:1 COG:RSp1499 KEGG:ns NR:ns ## COG: RSp1499 COG3121 # Protein_GI_number: 17549718 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Ralstonia solanacearum # 26 206 37 214 241 118 39.0 1e-26 MQKTISTLVGMLAAATALHSQAAGLQVSPTSLSLPAKQRAGIFTLGNTGSEPLTAQVRVY GWSQDEKGNEVLTPTNAVIASPPMVKLEAGAKQQFRVIRIRPSEKPVEEAYRLIVDELPA PQAKPRKGLQFVMRYSLPLFTNVQNNAEAKLHWRAEKTANGKTVLVAENSGTAYAQLSNI NLQTASAKEPLTLAGGLAGYVLPGNTWKRELDVSPAVFSQGRLNATVNGGATQPEVRFAT P >gi|289656341|gb|ADEA01000026.1| GENE 33 36831 - 39299 2968 822 aa, chain + ## HITS:1 COG:RSp1498 KEGG:ns NR:ns ## COG: RSp1498 COG3188 # Protein_GI_number: 17549717 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Ralstonia solanacearum # 47 821 48 779 786 275 29.0 2e-73 MLPLDPKIRLSRLTAALMLCLYALPTPAQDILPQAAPVAYEQAWLTVYPQVTVNGSVRDG TAPFMSRNGVLYARTESLRAYGVVLPSETAAEAGKGGVTPEIQDGASAPGAGVWFDLASV PGLQAKYDAATQILDITAPLEWQPDLKTTRIGEQKENRYPIGRPGFAAVLNYDTNFSRNN SGGGTQGVFGELRLTTPWGYLNHTQFANRSHARDGENHRSDARLDTYWRTVWPERGLSLT VGDTLTGQLGSWGGTRIGGIKLSRTYNTQPWKQTAPLRSYLGRSTLPGTVDLYLDGVKQM SRDIAAGEYELVLPPTISGRSNAQVVATDVLGRTVVVDMPLYGGSGLLAKGLNEWSLEAG YVRRDYGVRSAKYQSDPAASGTLRYGLTNFLTAQIHGEAAHGYRQIGISADTLLGSLGQI NLTHAQSRFAGQTGQRSSAFFSTQWHQTSFSAGWNKSDGRFAELGDTAYDDRRPTDDRHG STSASVSAGWSSDKLGSFSLSYLHSRTEGRPADSIGSFSWSRNLKKRASLYTSAAKNFNG KHELSLYAGLSVNLDKGYSASAGAGRNGRDNSYQMTLNKTGSGLNSTNWGLSWQQTEDTT GRRKNTLNANIRYHSVYGDGWANTYSHADSNNWNAGWRGGIVLMGGGLFATRQVNDSFAV VSTGGMADVPIRAGGMPVGKTNRRGLALIPNLSAYQKNTVSVDITELPLDVQLEHTVAEI APSERSGMRVEFKIHRTRSATMTLKDGQNQWLPGGGTIADAQGDPVAVTGFDGKTYIENM QEGKNNFTVTLPENGGNCSFEADYPEERNPDTLPDLGDIICK >gi|289656341|gb|ADEA01000026.1| GENE 34 39290 - 40414 918 374 aa, chain + ## HITS:1 COG:AGl303 KEGG:ns NR:ns ## COG: AGl303 COG5430 # Protein_GI_number: 15890262 # Func_class: S Function unknown # Function: Uncharacterized secreted protein # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 84 374 46 316 316 68 27.0 3e-11 MQMIMKKGRLKTANRLLQQTALPATFGLLSLFGEPAWADSGVAGRFVQCTARVQGNGTFN GNPALVFGSQGNGVNLLNNNQPEDIQATIHYQCTNNDAYTVKVRLCFNIDGGRRSPNIYT PRKMVHSRNNAQTLQLSLLKPDNTNWGTDNTANSPSSFGTGVFHIGLNSSVSGTIPIKAR LISGQNNAIPTNLGSYLADFTSGSTALSWKAERYAIGPNPSDCGNILTNNRFPFVVQAHV APVCEITAADDIDFGTHTAGSTDLKQSGNLTVRCTNSTPYSIGLVPSNGNQDGKGEMKSL NHAATNTDKVPYQLRKSSSSNAHFWGNNESGSGSVKSNQTGDGNEQTHTVYAEVRSTDYT PDEYRDKVTVHVKY >gi|289656341|gb|ADEA01000026.1| GENE 35 40644 - 41681 1144 345 aa, chain - ## HITS:1 COG:NMA2139 KEGG:ns NR:ns ## COG: NMA2139 COG0042 # Protein_GI_number: 15795010 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-dihydrouridine synthase # Organism: Neisseria meningitidis Z2491 # 20 345 11 336 336 595 86.0 1e-170 MENYEIPLINKEVIDYKGTRRVCVAPMLDWTDRHFRYMARQITENAWLYSEMINAGAIIY GDKDRFLMFNEGEQPVALQLGGSEPADLAKAAKAAEEYGYNEINLNCGCPSPRVQKGAFG ACLMNEVGLVADCLNAMQDAVDIPVTVKHRIGVDRQTEYGVAAEFVGTLYEKTACRTFIV HARNAWLDGLSPKENREVPPLKYDYVYRLKQDFPELEIIINGGITTNEQISEHLKHVDGV MVGREAYHNPMIMRDWDRLFYGESSPPVEYADLVLKLYEYSRAQIQAGRGTILRHIVRHS LGLMHGLKNARTWRRMLSDAALLKNNDGSLILDAWREVEKANIWE >gi|289656341|gb|ADEA01000026.1| GENE 36 41779 - 42936 513 385 aa, chain + ## HITS:1 COG:RSc1554 KEGG:ns NR:ns ## COG: RSc1554 COG0582 # Protein_GI_number: 17546273 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Ralstonia solanacearum # 1 372 1 354 354 66 21.0 8e-11 MGTISKRINPSGTTVYRAVIRIRKNGYPNFTESRTFSKKSMAAEWVKRREAEIELNPDIL FGQKNKLFPTLHEAVDRYLTEAANAGRSKQMGLRFLSSFPIGSNRINRLRRADFAEHVML RRRGMPQDGIKPIAASTALQELQYIRTVLKHAFYVWDMPVSWQELDFAAEGLGKSGIIAK STKRNRLPTSDELQRLTTFFYQNWTNWRQTNLIPMHLIMWLAIYTTRRQDEICRMMLDDY HPDSAEWLIRDVKHPQGSKGNDKKFDVRPQALPVIAALSEPETRRRMLKCNGTPNSLVPL DPKSISAAFTRACHVLGIDDLRFHDLRHEGATRLAEDGATPPQMQMVTLHNTWASLERYV NLRKRPQRLEFDEAIKNAENDLNLS >gi|289656341|gb|ADEA01000026.1| GENE 37 42981 - 43490 307 169 aa, chain - ## HITS:1 COG:no KEGG:NMC0878 NR:ns ## KEGG: NMC0878 # Name: not_defined # Def: putative integral membrane protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 5 167 4 166 169 181 70.0 1e-44 MVSDLLKYWKPLAIVALLAVIFAARHFDRAEKYQRGRDAMAAEISNRLKDGYIEQAKTAR EAEQKAAAALADRQTKLEKEKENAKQTVTAMRFELDRLQQYAKHQSSVRNMPATATTAAA SDGAADSYGWQLFGKCAAEYAGLAETADGQAADLKEWQAYGQTVIEQSK >gi|289656341|gb|ADEA01000026.1| GENE 38 43483 - 43953 305 156 aa, chain - ## HITS:1 COG:STM1028 KEGG:ns NR:ns ## COG: STM1028 COG3772 # Protein_GI_number: 16764388 # Func_class: R General function prediction only # Function: Phage-related lysozyme (muraminidase) # Organism: Salmonella typhimurium LT2 # 5 153 2 149 150 90 37.0 8e-19 MNENLHLDGSGYELIVGWEGKRNHSYLDSVRIPTIGIGFVRYTLGARAGHKVCMGDTMTD EEIKAEFLNQIKSYENGVKEVVKVPLTQSQFNACVSLCYNIGVAAFAKSTVVRRLNERKY KAACDAFAMWNKAGGRVIPGLANRRSSEQKEFFRNG >gi|289656341|gb|ADEA01000026.1| GENE 39 44278 - 44703 474 141 aa, chain - ## HITS:1 COG:no KEGG:NMO_0807 NR:ns ## KEGG: NMO_0807 # Name: not_defined # Def: putative phage associated membrane protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 1 141 1 141 141 238 90.0 5e-62 MSEPIITPAAIYTFGGVVGAGHLLGMPVDAVVLGAVASAAVTMISEPKSRWLVVAYTIIG GLLGGAFAPPLTHFLIGEAIGSHPSLGEQRLQLAHVFAPVVVGLLWQVLLKFARTVWPSF ENHADDIVEWLLNLLPWRPKK >gi|289656341|gb|ADEA01000026.1| GENE 40 44765 - 45133 402 122 aa, chain - ## HITS:1 COG:no KEGG:NMC0873 NR:ns ## KEGG: NMC0873 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 121 14 134 136 172 69.0 3e-42 MSKDKNQIIVGISREIVDTETDSSAAFHVIRYLSLDVASGFHSVTVDSYVRKSTFDRGGR AVGSMQFNLTGKPPRGSDIQDWAYRSIVAEIEAGTTDSAGAPVLANSLTGADLVYADLPD AV >gi|289656341|gb|ADEA01000026.1| GENE 41 45188 - 45595 131 135 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298369827|ref|ZP_06981143.1| ## NR: gi|298369827|ref|ZP_06981143.1| hypothetical protein HMPREF9016_01161 [Neisseria sp. oral taxon 014 str. F0314] # 1 135 314 448 448 278 100.0 1e-73 MVSPYKTAVVFSNIRNLVIDRISDQQSINVPAGTVVLPAVMWLDEYRVNYNFVCMIGWES NVHSFYANYGSSFVGMFTDAAYPQRMLSDAPALFAERDETRVMDPTMARNERLYYSNWNN INDMGGYMGVIAYDV >gi|289656341|gb|ADEA01000026.1| GENE 42 46581 - 47435 665 284 aa, chain - ## HITS:1 COG:no KEGG:NMC0870 NR:ns ## KEGG: NMC0870 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 86 235 1094 1246 1421 218 71.0 1e-55 MQTYSLSDGTLQEGEPVVLTLWGELGSDREAFWPFNSDSWNWLGVMKKVSDGVYRIVTTW KRSKNNPPNDRLLIYCGPNTGKTVSRIDRIKLERGTVATDWTPAPEDGAAAASNLAAVVQ QTSTAVTELGGKVQSLYTLKTEAISGGRKAIAGIALGADGKTGSGEILLMADKVAYVDPR DKSVTPAFVTVIENGRAKQALNGDLVADGTILGRHVAAAQTFQAPVINGGSLNIGNGRFA VNSEGQVSISASSGNVGMKITNDNINVYDENGVLQAQFGLLTDW Prediction of potential genes in microbial genomes Time: Thu May 26 13:37:57 2011 Seq name: gi|289656340|gb|ADEA01000027.1| Neisseria sp. oral taxon 014 str. F0314 cont1.27, whole genome shotgun sequence Length of sequence - 180692 bp Number of predicted genes - 173, with homology - 169 Number of transcription units - 88, operones - 39 average op.length - 3.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 3681 2343 ## COG4733 Phage-related protein, tail component - Prom 3706 - 3765 2.9 - Term 4372 - 4411 3.1 2 2 Op 1 6/0.038 - CDS 4428 - 5183 368 ## COG0791 Cell wall-associated hydrolases (invasion-associated proteins) 3 2 Op 2 5/0.038 - CDS 5183 - 5905 398 ## COG4672 Phage-related protein 4 2 Op 3 6/0.038 - CDS 5902 - 6234 266 ## COG4718 Phage-related protein 5 2 Op 4 . - CDS 6255 - 9368 2499 ## COG5281 Phage-related minor tail protein - Prom 9449 - 9508 2.2 6 3 Op 1 . - CDS 9556 - 9822 122 ## NMO_0797 putative phage associated protein 7 3 Op 2 . - CDS 9876 - 10187 234 ## NMC0863 hypothetical protein - Term 10193 - 10229 2.1 8 4 Op 1 . - CDS 10266 - 10907 656 ## COG5492 Bacterial surface proteins containing Ig-like domains 9 4 Op 2 . - CDS 10941 - 11243 251 ## NMO_0794 putative phage associated protein - Term 11282 - 11318 5.3 10 5 Op 1 . - CDS 11341 - 11661 348 ## NMC0860 hypothetical protein 11 5 Op 2 . - CDS 11636 - 11896 212 ## gi|298369840|ref|ZP_06981156.1| conserved hypothetical protein 12 5 Op 3 . - CDS 11954 - 13846 2067 ## NMO_0791 putative phage major capsid protein 13 5 Op 4 . - CDS 13827 - 15143 971 ## COG5511 Bacteriophage capsid protein - Term 15339 - 15370 1.1 14 6 Op 1 . - CDS 15398 - 15652 290 ## NMO_0789 putative phage associated protein 15 6 Op 2 . - CDS 15639 - 16025 341 ## NMC0855 hypothetical protein 16 6 Op 3 . - CDS 16028 - 16234 270 ## gi|298369845|ref|ZP_06981161.1| conserved hypothetical protein - Term 16240 - 16281 7.9 17 7 Op 1 . - CDS 16446 - 18473 1684 ## COG5525 Bacteriophage tail assembly protein 18 7 Op 2 . - CDS 18433 - 18924 428 ## HCH_02893 phage DNA packaging protein, Nu1 subunit of terminase 19 7 Op 3 . - CDS 19024 - 19686 1 ## Spro_4925 hypothetical protein - Prom 19707 - 19766 2.6 - Term 19741 - 19800 7.1 20 8 Tu 1 . - CDS 19840 - 20223 87 ## gi|298369849|ref|ZP_06981165.1| DnaJ protein - Prom 20295 - 20354 5.5 + Prom 20405 - 20464 7.3 21 9 Op 1 . + CDS 20492 - 20668 312 ## plu3492 hypothetical protein 22 9 Op 2 . + CDS 20704 - 21120 576 ## COG1598 Uncharacterized conserved protein + Term 21133 - 21176 9.9 - Term 21322 - 21380 15.0 23 10 Op 1 . - CDS 21547 - 24384 2140 ## COG0358 DNA primase (bacterial type) 24 10 Op 2 . - CDS 24386 - 24625 171 ## gi|298369853|ref|ZP_06981169.1| hypothetical protein HMPREF9016_01187 + Prom 24919 - 24978 5.8 25 11 Op 1 . + CDS 25071 - 25772 648 ## COG2932 Predicted transcriptional regulator 26 11 Op 2 . + CDS 25850 - 26287 336 ## NGK_0650 putative phage associated protein 27 11 Op 3 . + CDS 26265 - 26765 244 ## NGK_0649 putative phage associated protein 28 11 Op 4 . + CDS 26762 - 27175 269 ## NGK_0648 putative phage associated protein + Term 27182 - 27213 2.5 + Prom 27261 - 27320 6.9 29 12 Tu 1 . + CDS 27377 - 27664 295 ## gi|298369858|ref|ZP_06981174.1| conserved hypothetical protein + Prom 27707 - 27766 3.1 30 13 Op 1 . + CDS 27798 - 28157 497 ## NMB0907 hypothetical protein 31 13 Op 2 . + CDS 28209 - 29066 818 ## COG5532 Uncharacterized conserved protein 32 13 Op 3 . + CDS 29111 - 29317 324 ## NMA1880 hypothetical protein 33 13 Op 4 . + CDS 29338 - 29475 191 ## 34 13 Op 5 . + CDS 29522 - 30037 586 ## gi|298369862|ref|ZP_06981178.1| conserved hypothetical protein 35 13 Op 6 . + CDS 30030 - 30245 72 ## gi|298369863|ref|ZP_06981179.1| conserved hypothetical protein 36 13 Op 7 . + CDS 30238 - 30585 416 ## gi|298369864|ref|ZP_06981180.1| conserved hypothetical protein 37 13 Op 8 . + CDS 30599 - 30880 266 ## gi|255066363|ref|ZP_05318218.1| transcriptional regulator, TetR family 38 13 Op 9 . + CDS 30834 - 31100 346 ## gi|298369865|ref|ZP_06981181.1| conserved hypothetical protein 39 13 Op 10 . + CDS 31142 - 31384 236 ## gi|298369866|ref|ZP_06981182.1| hypothetical protein HMPREF9016_01200 40 13 Op 11 . + CDS 31403 - 31648 216 ## + Term 31667 - 31704 5.1 + Prom 32243 - 32302 6.5 41 14 Op 1 9/0.000 + CDS 32324 - 34402 3400 ## COG1966 Carbon starvation protein, predicted membrane protein 42 14 Op 2 . + CDS 34386 - 34598 162 ## COG2879 Uncharacterized small protein + Term 34618 - 34655 6.1 - Term 34693 - 34739 8.3 43 15 Tu 1 . - CDS 34775 - 35245 650 ## NMA1697 putative lipoprotein - Prom 35292 - 35351 5.3 44 16 Tu 1 . - CDS 35424 - 36443 1082 ## COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis - Prom 36483 - 36542 2.0 - Term 36487 - 36532 8.3 45 17 Op 1 4/0.115 - CDS 36547 - 37044 759 ## COG4314 Predicted lipoprotein involved in nitrous oxide reduction 46 17 Op 2 24/0.000 - CDS 37041 - 37871 1333 ## COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component 47 17 Op 3 6/0.038 - CDS 37868 - 38761 257 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 48 18 Tu 1 . - CDS 38867 - 40186 1759 ## COG3420 Nitrous oxidase accessory protein - Prom 40333 - 40392 5.3 - Term 40369 - 40420 11.2 49 19 Op 1 4/0.115 - CDS 40444 - 42411 2770 ## COG4263 Nitrous oxide reductase - Term 42421 - 42465 -0.8 50 19 Op 2 . - CDS 42482 - 44821 2192 ## COG3901 Regulator of nitric oxide reductase transcription - Prom 45015 - 45074 4.3 - Term 45138 - 45181 11.0 51 20 Op 1 2/0.385 - CDS 45201 - 46214 1719 ## COG0059 Ketol-acid reductoisomerase 52 20 Op 2 2/0.385 - CDS 46251 - 46544 591 ## COG1359 Uncharacterized conserved protein 53 20 Op 3 32/0.000 - CDS 46628 - 47119 772 ## COG0440 Acetolactate synthase, small (regulatory) subunit 54 20 Op 4 . - CDS 47116 - 48894 2206 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] - Prom 49132 - 49191 5.6 - Term 49269 - 49332 24.0 55 21 Tu 1 . - CDS 49351 - 50583 1092 ## COG3525 N-acetyl-beta-hexosaminidase - TRNA 50757 - 50841 78.6 # Leu CAA 0 0 + Prom 50857 - 50916 5.5 56 22 Tu 1 . + CDS 51115 - 51786 1221 ## COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems + Term 51796 - 51848 12.1 57 23 Op 1 2/0.385 + CDS 51887 - 52540 1046 ## COG0040 ATP phosphoribosyltransferase 58 23 Op 2 2/0.385 + CDS 52632 - 53456 1038 ## COG3680 Uncharacterized protein conserved in bacteria 59 24 Tu 1 . + CDS 53641 - 54933 1850 ## COG0141 Histidinol dehydrogenase + Term 54974 - 55005 0.9 - Term 55088 - 55130 11.9 60 25 Tu 1 . - CDS 55141 - 55983 1246 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase - Prom 56103 - 56162 4.4 - Term 56052 - 56095 1.5 61 26 Op 1 . - CDS 56192 - 57883 2379 ## COG4178 ABC-type uncharacterized transport system, permease and ATPase components 62 26 Op 2 . - CDS 57986 - 58258 371 ## gi|298369888|ref|ZP_06981204.1| hypothetical protein HMPREF9016_01222 - Prom 58481 - 58540 10.2 - Term 58847 - 58889 4.0 63 27 Tu 1 . - CDS 58905 - 61118 3061 ## COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid - Prom 61359 - 61418 7.8 + Prom 61652 - 61711 3.7 64 28 Tu 1 . + CDS 61731 - 62567 1117 ## COG0560 Phosphoserine phosphatase + Term 62618 - 62660 13.5 - Term 62598 - 62653 15.8 65 29 Op 1 3/0.192 - CDS 62671 - 64479 2701 ## COG0173 Aspartyl-tRNA synthetase - Term 64509 - 64557 10.2 66 29 Op 2 2/0.385 - CDS 64566 - 65255 924 ## COG2928 Uncharacterized conserved protein - Prom 65287 - 65346 5.3 67 29 Op 3 2/0.385 - CDS 65349 - 66491 1082 ## COG2829 Outer membrane phospholipase A - Prom 66574 - 66633 5.1 - Term 66615 - 66664 7.3 68 30 Tu 1 . - CDS 66703 - 66966 407 ## PROTEIN SUPPORTED gi|15676374|ref|NP_273510.1| 30S ribosomal protein S20 - Prom 67000 - 67059 4.7 + Prom 66959 - 67018 3.9 69 31 Op 1 . + CDS 67255 - 68397 1853 ## COG0687 Spermidine/putrescine-binding periplasmic protein + Term 68412 - 68458 13.1 + Prom 68406 - 68465 3.9 70 31 Op 2 . + CDS 68540 - 69241 867 ## COG2908 Uncharacterized protein conserved in bacteria + Term 69248 - 69297 19.3 - Term 69232 - 69289 24.6 71 32 Op 1 . - CDS 69328 - 70413 1511 ## COG1472 Beta-glucosidase-related glycosidases 72 32 Op 2 . - CDS 70521 - 72044 2138 ## COG1757 Na+/H+ antiporter - Term 72152 - 72187 2.1 73 33 Tu 1 . - CDS 72230 - 73726 2328 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - Prom 73771 - 73830 3.5 - Term 73779 - 73821 3.1 74 34 Tu 1 . - CDS 74071 - 74703 854 ## COG0177 Predicted EndoIII-related endonuclease - Prom 74735 - 74794 4.6 - Term 74738 - 74801 20.5 75 35 Tu 1 . - CDS 74806 - 75741 1497 ## COG0181 Porphobilinogen deaminase - Prom 75824 - 75883 5.0 + Prom 75817 - 75876 3.4 76 36 Op 1 11/0.000 + CDS 75901 - 76416 785 ## COG0319 Predicted metal-dependent hydrolase 77 36 Op 2 . + CDS 76418 - 77251 1512 ## COG4535 Putative Mg2+ and Co2+ transporter CorC + Prom 77336 - 77395 4.2 78 37 Tu 1 . + CDS 77438 - 77842 655 ## COG2010 Cytochrome c, mono- and diheme variants + Term 78033 - 78068 1.0 79 38 Op 1 . - CDS 77846 - 78271 584 ## NMC1698 putative secreted protein 80 38 Op 2 2/0.385 - CDS 78275 - 79081 758 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 81 38 Op 3 8/0.000 - CDS 79159 - 79545 710 ## COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) 82 38 Op 4 . - CDS 79613 - 80341 1282 ## COG0854 Pyridoxal phosphate biosynthesis protein - Prom 80419 - 80478 3.6 83 39 Op 1 42/0.000 - CDS 80489 - 81364 1401 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components - Term 81372 - 81408 3.0 84 39 Op 2 . - CDS 81432 - 82157 909 ## COG1121 ABC-type Mn/Zn transport systems, ATPase component - Prom 82318 - 82377 6.1 + Prom 82360 - 82419 4.2 85 40 Op 1 40/0.000 + CDS 82450 - 83121 1039 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 86 40 Op 2 . + CDS 83195 - 84508 1974 ## COG0642 Signal transduction histidine kinase + Term 84552 - 84625 31.7 - Term 84556 - 84594 10.2 87 41 Op 1 . - CDS 84614 - 84898 497 ## NMC1683 hypothetical protein - Prom 84930 - 84989 1.9 88 41 Op 2 . - CDS 85035 - 87203 2218 ## COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase - Prom 87354 - 87413 3.6 + Prom 87191 - 87250 3.8 89 42 Tu 1 . + CDS 87406 - 88206 1354 ## COG1651 Protein-disulfide isomerase + Term 88230 - 88273 12.2 - Term 88212 - 88265 14.8 90 43 Op 1 . - CDS 88287 - 88961 892 ## COG0819 Putative transcription activator - Term 88983 - 89024 7.5 91 43 Op 2 . - CDS 89031 - 90092 694 ## PROTEIN SUPPORTED gi|229232313|ref|ZP_04356740.1| (SSU ribosomal protein S18P)-alanine acetyltransferase - Prom 90119 - 90178 2.6 + Prom 90269 - 90328 3.2 92 44 Tu 1 . + CDS 90373 - 90741 594 ## MS0269 hypothetical protein + Term 90760 - 90805 12.9 - Term 90748 - 90793 13.7 93 45 Op 1 8/0.000 - CDS 90813 - 92003 1380 ## COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component 94 45 Op 2 3/0.192 - CDS 91987 - 94014 1758 ## COG1333 ResB protein required for cytochrome c biosynthesis - Prom 94061 - 94120 7.4 - Term 94211 - 94266 9.2 95 46 Tu 1 . - CDS 94282 - 94905 743 ## COG2863 Cytochrome c553 - Prom 95024 - 95083 7.4 + Prom 94907 - 94966 5.5 96 47 Tu 1 . + CDS 95052 - 95699 534 ## COG0218 Predicted GTPase - Term 95744 - 95805 9.6 97 48 Tu 1 . - CDS 95821 - 98184 1238 ## COG5009 Membrane carboxypeptidase/penicillin-binding protein - Prom 98343 - 98402 5.0 + Prom 98214 - 98273 5.8 98 49 Op 1 8/0.000 + CDS 98371 - 99477 521 ## COG4972 Tfp pilus assembly protein, ATPase PilM 99 49 Op 2 6/0.038 + CDS 99478 - 100068 525 ## COG3166 Tfp pilus assembly protein PilN 100 49 Op 3 6/0.038 + CDS 100070 - 100741 446 ## COG3167 Tfp pilus assembly protein PilO + Prom 100744 - 100803 2.1 101 50 Op 1 6/0.038 + CDS 100843 - 101328 248 ## COG3168 Tfp pilus assembly protein PilP 102 50 Op 2 8/0.000 + CDS 101346 - 103493 1484 ## COG4796 Type II secretory pathway, component HofQ + Term 103512 - 103555 8.5 + Prom 103851 - 103910 3.1 103 51 Op 1 20/0.000 + CDS 103958 - 104482 327 ## COG0703 Shikimate kinase + Term 104487 - 104516 -0.3 + Prom 104495 - 104554 3.4 104 51 Op 2 2/0.385 + CDS 104582 - 105667 1470 ## COG0337 3-dehydroquinate synthetase + Term 105686 - 105732 15.2 + Prom 105740 - 105799 3.4 105 52 Tu 1 . + CDS 105840 - 106682 1149 ## COG0121 Predicted glutamine amidotransferase + Prom 106707 - 106766 3.3 106 53 Op 1 . + CDS 106791 - 107255 630 ## COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains 107 53 Op 2 . + CDS 107286 - 107873 842 ## gi|298369933|ref|ZP_06981249.1| cytochrome c, class I 108 53 Op 3 . + CDS 107888 - 108991 1283 ## COG1985 Pyrimidine reductase, riboflavin biosynthesis + Prom 109194 - 109253 9.7 109 54 Op 1 2/0.385 + CDS 109457 - 110761 2274 ## COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase 110 54 Op 2 . + CDS 110776 - 111828 1807 ## COG0673 Predicted dehydrogenases and related proteins + Term 111870 - 111923 0.3 111 55 Op 1 . + CDS 111932 - 112870 1103 ## COG0578 Glycerol-3-phosphate dehydrogenase 112 55 Op 2 9/0.000 + CDS 112867 - 113448 966 ## COG0110 Acetyltransferase (isoleucine patch superfamily) 113 55 Op 3 6/0.038 + CDS 113491 - 114576 1688 ## COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 114 55 Op 4 11/0.000 + CDS 114665 - 116089 1687 ## COG2244 Membrane protein involved in the export of O-antigen and teichoic acid 115 55 Op 5 . + CDS 116109 - 117287 1549 ## COG0438 Glycosyltransferase 116 55 Op 6 . + CDS 117277 - 118575 1604 ## MS1493 hypothetical protein 117 55 Op 7 25/0.000 + CDS 118596 - 119648 1633 ## COG0438 Glycosyltransferase + Prom 119668 - 119727 3.7 118 55 Op 8 25/0.000 + CDS 119761 - 120828 1494 ## COG0438 Glycosyltransferase 119 55 Op 9 12/0.000 + CDS 120842 - 122014 1720 ## COG0438 Glycosyltransferase 120 55 Op 10 . + CDS 122007 - 122627 821 ## COG2148 Sugar transferases involved in lipopolysaccharide synthesis 121 55 Op 11 . + CDS 122611 - 123588 917 ## COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) 122 55 Op 12 . + CDS 123575 - 124249 682 ## COG1011 Predicted hydrolase (HAD superfamily) 123 55 Op 13 . + CDS 124286 - 125071 1223 ## COG0223 Methionyl-tRNA formyltransferase 124 55 Op 14 7/0.000 + CDS 125064 - 126239 1719 ## COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 125 55 Op 15 1/0.423 + CDS 126327 - 128228 2491 ## COG1086 Predicted nucleoside-diphosphate sugar epimerases 126 55 Op 16 6/0.038 + CDS 128287 - 129420 1843 ## COG1596 Periplasmic protein involved in polysaccharide export 127 55 Op 17 3/0.192 + CDS 129467 - 129907 468 ## COG0394 Protein-tyrosine-phosphatase 128 55 Op 18 . + CDS 129967 - 132147 3207 ## COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis + Term 132179 - 132220 10.0 - Term 132294 - 132331 6.3 129 56 Tu 1 . - CDS 132341 - 133723 2024 ## COG1538 Outer membrane protein 130 57 Tu 1 . - CDS 133922 - 134227 333 ## NT05HA_1168 mitomycin resistance protein McrB - Prom 134376 - 134435 1.6 131 58 Tu 1 . - CDS 134441 - 134917 665 ## CCC13826_0030 hypothetical protein - Prom 135028 - 135087 1.9 132 59 Op 1 13/0.000 - CDS 135124 - 137061 376 ## PROTEIN SUPPORTED gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 - Prom 137106 - 137165 2.5 133 59 Op 2 . - CDS 137210 - 138394 1458 ## COG0845 Membrane-fusion protein - Prom 138481 - 138540 8.1 + Prom 138609 - 138668 6.1 134 60 Tu 1 . + CDS 138721 - 139143 735 ## COG4968 Tfp pilus assembly protein PilE + Term 139227 - 139279 11.0 - Term 139209 - 139271 17.3 135 61 Tu 1 . - CDS 139281 - 140009 1231 ## COG0217 Uncharacterized conserved protein - Prom 140176 - 140235 5.5 + Prom 140154 - 140213 7.0 136 62 Tu 1 . + CDS 140334 - 141761 855 ## PROTEIN SUPPORTED gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 + Term 141779 - 141828 12.9 + Prom 141826 - 141885 5.1 137 63 Tu 1 . + CDS 141933 - 143768 2881 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) + Term 143785 - 143834 13.4 + Prom 143827 - 143886 2.0 138 64 Tu 1 . + CDS 143979 - 144908 930 ## Noca_3206 putative transmembrane protein + Term 144916 - 144950 1.3 - Term 144938 - 144975 6.1 139 65 Tu 1 . - CDS 145000 - 147603 3759 ## COG0308 Aminopeptidase N 140 66 Op 1 . + CDS 147870 - 148019 96 ## gi|298369968|ref|ZP_06981284.1| hypothetical protein HMPREF9016_01302 141 66 Op 2 7/0.000 + CDS 148029 - 149372 1791 ## COG1726 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA 142 66 Op 3 9/0.000 + CDS 149375 - 150607 1907 ## COG1805 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB 143 66 Op 4 9/0.000 + CDS 150600 - 151376 1308 ## COG2869 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC 144 66 Op 5 9/0.000 + CDS 151376 - 152002 872 ## COG1347 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD 145 66 Op 6 7/0.000 + CDS 152006 - 152599 1037 ## COG2209 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE 146 66 Op 7 . + CDS 152613 - 153830 1787 ## COG2871 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF + Term 153847 - 153890 11.2 + Prom 153932 - 153991 2.9 147 67 Tu 1 . + CDS 154021 - 154512 591 ## gi|298369975|ref|ZP_06981291.1| periplasmic protein + Term 154740 - 154783 11.2 + TRNA 154658 - 154733 84.9 # Asn GTT 0 0 - Term 154902 - 154953 11.2 148 68 Tu 1 . - CDS 154966 - 156087 1531 ## COG0687 Spermidine/putrescine-binding periplasmic protein - Prom 156326 - 156385 3.9 + Prom 156353 - 156412 3.4 149 69 Tu 1 2/0.385 + CDS 156437 - 156961 831 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes + Term 156974 - 157015 10.1 150 70 Tu 1 . + CDS 157031 - 159016 3457 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit + Prom 159074 - 159133 3.8 151 71 Tu 1 . + CDS 159337 - 159861 739 ## COG3038 Cytochrome B561 + Term 159889 - 159935 13.5 - Term 159877 - 159921 13.1 152 72 Tu 1 . - CDS 159930 - 160298 419 ## COG2967 Uncharacterized protein affecting Mg2+/Co2+ transport - Prom 160336 - 160395 8.1 153 73 Op 1 12/0.000 - CDS 160419 - 160907 430 ## COG1267 Phosphatidylglycerophosphatase A and related proteins 154 73 Op 2 1/0.423 - CDS 160900 - 161859 381 ## COG0611 Thiamine monophosphate kinase - Prom 161905 - 161964 8.7 - Term 162057 - 162106 11.2 155 74 Tu 1 . - CDS 162119 - 162862 914 ## COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins + Prom 162948 - 163007 3.5 156 75 Op 1 . + CDS 163113 - 163298 119 ## 157 75 Op 2 . + CDS 163295 - 164245 1039 ## COG0583 Transcriptional regulator + Term 164267 - 164330 21.4 - Term 164254 - 164319 25.1 158 76 Tu 1 . - CDS 164330 - 165064 653 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - Prom 165144 - 165203 5.7 + Prom 165034 - 165093 4.2 159 77 Tu 1 . + CDS 165216 - 166622 2093 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases + Prom 166672 - 166731 5.3 160 78 Tu 1 . + CDS 166762 - 167013 315 ## COG3313 Predicted Fe-S protein + Term 167034 - 167072 10.2 - Term 166828 - 166854 -1.0 161 79 Tu 1 . - CDS 167051 - 170263 4096 ## COG1330 Exonuclease V gamma subunit - Prom 170296 - 170355 5.8 + Prom 170389 - 170448 5.0 162 80 Op 1 . + CDS 170579 - 171985 1746 ## COG3182 Uncharacterized iron-regulated membrane protein + Term 172003 - 172043 9.8 + Prom 171991 - 172050 5.5 163 80 Op 2 . + CDS 172074 - 172664 816 ## COG2365 Protein tyrosine/serine phosphatase + Term 172706 - 172751 15.3 - Term 172690 - 172744 19.1 164 81 Op 1 . - CDS 172755 - 173255 707 ## COG1247 Sortase and related acyltransferases - Prom 173276 - 173335 6.1 - Term 173303 - 173363 4.4 165 81 Op 2 . - CDS 173459 - 173662 227 ## gi|298369992|ref|ZP_06981308.1| hypothetical protein HMPREF9016_01326 + Prom 173390 - 173449 3.7 166 82 Tu 1 . + CDS 173626 - 173883 122 ## - Term 174165 - 174199 5.2 167 83 Tu 1 . - CDS 174228 - 175889 2226 ## COG0644 Dehydrogenases (flavoproteins) - Prom 175923 - 175982 6.0 - Term 176075 - 176114 9.3 168 84 Op 1 . - CDS 176133 - 176507 252 ## NMCC_0818 hypothetical protein 169 84 Op 2 . - CDS 176524 - 176952 410 ## NMA1082 hypothetical protein - Prom 177084 - 177143 4.9 - Term 177132 - 177181 11.3 170 85 Tu 1 . - CDS 177217 - 178125 1564 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin - Prom 178155 - 178214 5.2 - Term 178158 - 178198 4.1 171 86 Tu 1 . - CDS 178244 - 178996 877 ## COG1381 Recombinational DNA repair protein (RecF pathway) - Prom 179018 - 179077 3.8 172 87 Tu 1 . - CDS 179168 - 180199 1157 ## COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) - Prom 180222 - 180281 5.4 + Prom 180322 - 180381 4.6 173 88 Tu 1 . + CDS 180533 - 180692 302 ## COG0511 Biotin carboxyl carrier protein Predicted protein(s) >gi|289656340|gb|ADEA01000027.1| GENE 1 3 - 3681 2343 1226 aa, chain - ## HITS:1 COG:ECs1648 KEGG:ns NR:ns ## COG: ECs1648 COG4733 # Protein_GI_number: 15830902 # Func_class: S Function unknown # Function: Phage-related protein, tail component # Organism: Escherichia coli O157:H7 # 1 820 1 836 1132 474 36.0 1e-133 MGGKSGTGQVTPYESPNTLSGAQSLRIIDAIAEGVVAGFANGDDAPFKSVYFDDTPVQNP DGSFNFNGVTGYFQRGEQDQSYVPGFAASERTVPVSAAVKQGTPVVRAVTDSLISRLRVT VAVERNAQIKDNGDTVAAETVLNVELVNSKGPQAVKQVRFSEKSSGTYYQDVEFDTLPAV PFNVRVARITPDSSTDKISNNTYFSSYVEVVDAKLSYPHTAIAALAIDSAQFGNSVPRRN YLMKGRLVKVPSNYDPEKRVYGNGTWDGSFKTAWTNNPAWVFYDVLTQPRFSTLARRLNL GDVDKWSLYQIGKYCDELVDDGFGGKEPRFVCNAYITDLTQAGEFLLNLASVFTGLPLWN GQQVSVVMDADSDPVAQYNNANVKDGLFSYSGAALKSIHTAVHVQYVDKYDGYRAKTEYV ADNEAIARYGLNIKQVTAFGCDSRGQAARFGAWTLQTELRQQNAVSFTVGREGLKHLPYD IVQVMDNQYAGAELSGRVAAVSGNVLTLDRTVADAVGALLYYMDSDGLKSAKVTAAAGDK ITLERAVPLNAGDSWILSGKVKARLYRAIGIKENTDEGTYTITALLHDPKKYAAVDNFAV FDREITTLHKLAPVLTNGNITTDGGVLTLTWENLTADGQVLTYDIKIYRNNQLFRHVPDA ATAEVRLENLPNGDYRAEIRGRNARGVLSEPLVKAWSIDYTVTGLRAAPRTFAIELSWTL PQTVVSELVSELWYGRENNLQTASKLATLPYPQNGYTLTGVGVADEFFFWVRVRDAAGNT GNFTAAVHGTADKDPAPIVKQLQGAITKSALSNDLIKSLNDDMAAAGSKAAAAMQTAAIE EVARKIADEATNRSNAIQAEARERTAAIQAAADKAAADLTAKSREIGNKIAEVEQVNTQQ AQQIKTVTAAQQNTAAALEAEKTARAQGDNAEAMARNALAARVSTAEGSIAKEEAARIEA DKAQAAETAALKTSVGNTESAITALRETITRQDSARASEINTLTAKLDGMRVGGRNLIRD SAAEVRNANYLMQTYSLSDGTLQEGEPVVLTLWGELGSDREAFWPFNSDSWNWLGAMKKV SDGVYRIVTTWKRSKNNPPNDRLLIYCGPNTGKTVSRIDRIKLERGTVATDWTPAPEDGA TAASEVAAQLAAHKTAQAEVDKAQTADLTAAKSALAGAVADITSIKTTKADKSEVAALAR ATLASEWKSAADAAKRQPLPPRKPMP >gi|289656340|gb|ADEA01000027.1| GENE 2 4428 - 5183 368 251 aa, chain - ## HITS:1 COG:ECs1558_2 KEGG:ns NR:ns ## COG: ECs1558_2 COG0791 # Protein_GI_number: 15830812 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell wall-associated hydrolases (invasion-associated proteins) # Organism: Escherichia coli O157:H7 # 110 245 1 137 144 122 46.0 6e-28 MDLEVLNDDVRQMILDCAEEERPSEMCGVVVFNYDGFEFLHLKNVADRPSETFEISADAW LAAERAGEVAAVVHSHPAGEPFLSGADRQMQVHTGLPWILVTAGRLKLFRCVPHLRGRQF EYGKADCFTLIRDAFHLAGIDFRDHERTNIDRDAAADSFVRNLPDGGFSRVSDGTLQAGD VILTATGGHASHAMLYLGGDWILHHAYNQLSCRVPYTNYWAHVTHSVWRHRDWQPEMIAA IENDLLHRVDP >gi|289656340|gb|ADEA01000027.1| GENE 3 5183 - 5905 398 240 aa, chain - ## HITS:1 COG:ECs1645 KEGG:ns NR:ns ## COG: ECs1645 COG4672 # Protein_GI_number: 15830899 # Func_class: S Function unknown # Function: Phage-related protein # Organism: Escherichia coli O157:H7 # 13 239 9 231 232 231 49.0 1e-60 MNPRIKAMSGVMLQALSATQQDVLVDLWQVDFREFGGEVFYYCGQVNELNKPVVWQGRAY EPLPIKAEGFETTSQGAGNRPTLTVSNIAGFVTAAAEQFNQMTGVTIIRRQTYAKFLDAV NFQSGKNPTADATQEVVSKYLVERLSALTAETATLELAAPSESDGAVVPARIMLANICCW KYRGEGCGYTGRAVADRFDIPTDDSKKDMCSGTLTGCRARFGATAVLPFGGFPSSDKVNT >gi|289656340|gb|ADEA01000027.1| GENE 4 5902 - 6234 266 110 aa, chain - ## HITS:1 COG:RSc1691 KEGG:ns NR:ns ## COG: RSc1691 COG4718 # Protein_GI_number: 17546410 # Func_class: S Function unknown # Function: Phage-related protein # Organism: Ralstonia solanacearum # 3 110 4 111 112 88 41.0 2e-18 MAETFRWRVTSDAKATHKFNVRSVQFGDGYEQRQLKSLRPKLRSWDIKVVGQKALIGEIK AFFDARGGVEPFNWRPPEGGTALVKVSEYTETSKGGKVYELGCTFEEVLA >gi|289656340|gb|ADEA01000027.1| GENE 5 6255 - 9368 2499 1037 aa, chain - ## HITS:1 COG:ECs2726 KEGG:ns NR:ns ## COG: ECs2726 COG5281 # Protein_GI_number: 15831980 # Func_class: S Function unknown # Function: Phage-related minor tail protein # Organism: Escherichia coli O157:H7 # 51 401 48 389 620 168 33.0 4e-41 MARSLKSLENAIRRDIAVKIAGGKATREYYEALANQRGLDVSRLNPLLSQLDRYNVKTNR ATLTVGQFNNALRQTPAQIADIVTQLAGGQSPFLIMLQQGGQLRDMYGGFGGMFKGLSTI ITPSRLAVTGLAGGVAALGYAMYQGMEESQEYRKALILAGDAAGITANRMQDIAVSVGNA TGGYADARAAITALVSSGKVGAENYEQFTRAITLQAQATGQSIDDLVKKYVEIAKDPLQA VVALSANYRTMTADVYAQVKALQAQGREQEAVALVQRKFAAESEEMSARVLENLGAIERG WKSIKETASATWDALKSIGRDETKIDRLAALNSTIQQIEESKRNPVNSLFWSERGERRLQ AFYAERAKLQAEINRENAAAEEAKRRQAQIQSSTEASARLAHSAEAGIPKRILLERELAK IEKDKLEALKGANSELAKRQILQDAEYARAAALERFKEKTPKAKKQADPLRSLSDNQKRL YGLAKSAGEDPAKWLALYEIESASGRRLENKKSGALGHFQIMPQYLHDYGISRAGTKDLA TSFNAVRRHHRIGSASLQRALGRELTAGEYYLGHQQGWGGAKALLTNLDKNVVDALSTIM KRGRAVAAVTQNGGQVSMTARQFAEKWVSQANRLQEQFAQKGFGSLDAGGGAYLHDLAET AFDKWQQKFTEGQEKIRVQAALTAAHVGKSFKYQLELMSNPEFANFTETQRQTALEMAKA ADAQEDLTAATKKYADISKEMSKNTREKLEDKLFEISLIGKTREEIEKLTLARLWDKQIA QAQKDGAPAASIAQLERGKADSIGSLSQMQSAQKAVANDWQGGIKSGIQSYIDSFGTMRQ SMENDTVQTFDKMGDALADFVATGKLDFRNLTVSILQDLSKMLIKMAIVNAMKSALGGYA DGGVVGGGTQFDALFSSGGYTGAGGKYEPAGIVHKGEVVFSQQDVRNHGGVAAVERLRLK GYADGGAVGLPPVLAGRFGGSGGGNMQVNITINRSGAAESSAEGDTEMAKKLAEALPGMV EQWYLKNVYRENGTYHK >gi|289656340|gb|ADEA01000027.1| GENE 6 9556 - 9822 122 88 aa, chain - ## HITS:1 COG:no KEGG:NMO_0797 NR:ns ## KEGG: NMO_0797 # Name: not_defined # Def: putative phage associated protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 1 88 3 90 90 145 78.0 4e-34 MFGFSEDDFSEEEKTFGVWPCNWQAVQLFIALATQWRVGMSGATGLDYGAVAAVMDCHGI KPRKRKSMLRKIRAMEIEVLTMWAQEHE >gi|289656340|gb|ADEA01000027.1| GENE 7 9876 - 10187 234 103 aa, chain - ## HITS:1 COG:no KEGG:NMC0863 NR:ns ## KEGG: NMC0863 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 103 1 103 103 174 76.0 1e-42 MAKLSLKPDATFRHIVKIPVPGSEPADVEFEFKQRGNKAMQQFTEKHVDGWNADTVLDCA VGWNLEDTFDKENVELMLDAYPMSVFAIVKGYIDEVYNAREGN >gi|289656340|gb|ADEA01000027.1| GENE 8 10266 - 10907 656 213 aa, chain - ## HITS:1 COG:YPO2116 KEGG:ns NR:ns ## COG: YPO2116 COG5492 # Protein_GI_number: 16122351 # Func_class: N Cell motility # Function: Bacterial surface proteins containing Ig-like domains # Organism: Yersinia pestis # 1 166 1 166 306 98 39.0 7e-21 MAVKLPNGATVHIATALAAAKNVTAATNAAEAVLTSTAHGLVNGDFVLLKSGWGKLNERV FQVGGVATDTFKLVGIDTTNTDNFPAGSGGGTVQKITGWTNISQIIEFSTSGGEQQYVDF GFLEDDYEQQIPSTQSAMSISIKIADDPNLDGYKAAVKASDAGTQTPLKIVLKGGGQIVY NGYPSLNKTPEMTRNQLMAVTLSYAVSGPVNRY >gi|289656340|gb|ADEA01000027.1| GENE 9 10941 - 11243 251 100 aa, chain - ## HITS:1 COG:no KEGG:NMO_0794 NR:ns ## KEGG: NMO_0794 # Name: not_defined # Def: putative phage associated protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 1 100 40 139 139 161 82.0 8e-39 MVYVDSRRTEPETFDSPPIYRQTVRLVTLVCVQANTGADELAEEMLSVVQQAFVEHPDLG IDGLENLVPDLLNIDSDDSGEAVTVYYQQGWQAVYFEQAV >gi|289656340|gb|ADEA01000027.1| GENE 10 11341 - 11661 348 106 aa, chain - ## HITS:1 COG:no KEGG:NMC0860 NR:ns ## KEGG: NMC0860 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 7 106 1 100 100 180 95.0 2e-44 MEQVPAVFNEPLSVFTNPADFGETVMIGGKEVNAIFDREFMTDSGFGVAVANADPQIIVT EDDLPEDVKSVVVTVRGKRYTVAETDFDGCGMVVVQLRAVHDKPTY >gi|289656340|gb|ADEA01000027.1| GENE 11 11636 - 11896 212 86 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298369840|ref|ZP_06981156.1| ## NR: gi|298369840|ref|ZP_06981156.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 53 1 53 86 87 100.0 2e-16 MAKIKITPLRSFFDDGKGFFVGKKYSVDEEQAAAYIREGWAAEWSAESDGTAQTDGGDGD DGDITDDLTDGQGGGEGSDGTGAGGV >gi|289656340|gb|ADEA01000027.1| GENE 12 11954 - 13846 2067 630 aa, chain - ## HITS:1 COG:no KEGG:NMO_0791 NR:ns ## KEGG: NMO_0791 # Name: not_defined # Def: putative phage major capsid protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 1 630 1 630 630 1153 95.0 0 MKKIKPDKAQMQQMSRFAVFQRESVDVEKRTVEVAFSSEEPVERWFGDEVLSHAAGAVDL SRLNDGGAVLFNHDWDDQIGVIERAWIDADKRGRALVRFGNGTKAAEKFQDVQDGILRHI SVGYRVEDMVLDNPNADDEDYRYIVTRWMPYEISFVTVPADPTVGVGRSAEPFIENPVNP TPEKGNRNMNKNQIPADAETPAAAIPAAAATDTSNTAERGMQNERARVSELLAIGRSYAA HGGIEAAEKVIKEGGSEAQLRAAIMANMQTKPIVTADEIGMTDKEQREFSLLRAMSAAAT GKWDKAGLEREVSEELEKRHGRAAAGFFVPTDLIARAYSKGNAANGGNVIGNDFREDLFI ELLRNRLAVAQLGATVLDGLVGDITIPKHLTGNTVQWVDENGSAAESNATFGQMSLKPKT VTANTELSRKFILQSSLSAEQFARSELLKAMMLGIDLAAINGKGTGNEPTGILNTAGIGA VEIGANGGVPEWKHIVALESAIAAANADIGDLAYITNARVRGLLKTKLKADGVSGYIWQD GATPLNGYRCAVSNQIPSNLTKGTAANKCSPLIFGNWADLMIAHWGVLDVVVDPYTKSTA GAVRITTLQDVDIAVRHVESFAAIKDIVAA >gi|289656340|gb|ADEA01000027.1| GENE 13 13827 - 15143 971 438 aa, chain - ## HITS:1 COG:XF0713 KEGG:ns NR:ns ## COG: XF0713 COG5511 # Protein_GI_number: 15837315 # Func_class: R General function prediction only # Function: Bacteriophage capsid protein # Organism: Xylella fastidiosa 9a5c # 1 416 93 502 532 263 37.0 7e-70 MVESNVVGRDGFALQMRVLLDNAATPDTLANKAIEEAFSRWARRGVCDVTGQLSFTDLQR LLIRGVARDGEVLVRHLSGFNNEYGYALQVLDIDRLDTGYNVPPQNGRNAVRMGVELNSY SRPVAYWLRTSHPGEAYGQTNTGNLRERVPAEQISHIFLHDRPEQRRGFPWVASAIIGLQ NLSGYQEAAIIAARVGASKMGFFKQTEDADNFMPPIDGQEVDNGRGGIDLIDSVEPGTFH ELPQGYDFTPFDPDYPHANYDAFVKASLRGIASGLNVAYHSLANDLEGVNFSSIRSGTLE ERDTWMTLQNWFAESFLYDVFDRWIEAALLMGAIKMPSGKSLPAGKLDKFKACNWQGRRW SWVDPLKDINAHKEAVALSVKSRRDICTEMGLDFEDVIAQIEHENQILAAKGIAADVKPP PVAAEPESEDDPNEENKA >gi|289656340|gb|ADEA01000027.1| GENE 14 15398 - 15652 290 84 aa, chain - ## HITS:1 COG:no KEGG:NMO_0789 NR:ns ## KEGG: NMO_0789 # Name: not_defined # Def: putative phage associated protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 1 84 42 125 125 135 95.0 6e-31 MSGHDYAVELEEAREILNSLRKAYKEHAAGRGMTKRYKIKDREMEFSSLADLLKQIRFWQ REITRLEAAAGISPRRSGRIITRF >gi|289656340|gb|ADEA01000027.1| GENE 15 15639 - 16025 341 128 aa, chain - ## HITS:1 COG:no KEGG:NMC0855 NR:ns ## KEGG: NMC0855 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 128 1 128 128 221 92.0 7e-57 MEKQDNINPSHYRSRAVECIEFTERLNFCMGNAFKYVWRHREKNGAEDLKKAQWYLQRQL DSCAVMHLLESEEYADLMEMLEKCRLDDLMQHVLEEILYHAFFESEESLLAAMCGVSELL KEYGDERT >gi|289656340|gb|ADEA01000027.1| GENE 16 16028 - 16234 270 68 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298369845|ref|ZP_06981161.1| ## NR: gi|298369845|ref|ZP_06981161.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 68 28 95 95 138 100.0 1e-31 MSEKEQVLSYIAAHPGCTSTGVADVVYGKQKWSGWIFARRDIDTLIDEGLVEERFDQGIS KFYAKEAV >gi|289656340|gb|ADEA01000027.1| GENE 17 16446 - 18473 1684 675 aa, chain - ## HITS:1 COG:RSc0853 KEGG:ns NR:ns ## COG: RSc0853 COG5525 # Protein_GI_number: 17545572 # Func_class: R General function prediction only # Function: Bacteriophage tail assembly protein # Organism: Ralstonia solanacearum # 17 668 9 644 660 275 32.0 3e-73 MEMTAATMQARMAETVARVLRQACRKWAPPRKIKTRDWANKYRYLSSIEAARPGKYVLDV TPYLAWENSPLDALDDPSVQVVVCQKSAQVAWTSGVLGNFLGKSIDAEPSPILVLFPKEG AAKEYMDEKFVPMVEATPALREKVDTRIRAQGQRQLFKKFPGGFLKLVGSNSPASVKSSP VPIVCVEEPDDCNLNLRGQGDSIKLAKERTKTYRRPKIVLGGTPTIAGVSTIAAEMELSD KRVGMVPCHECGEAHVLSFDYLSCDEDPNGNHPVFGKKLPETAHYTCPNCGAVWNDMQKN RNVRRGWWQATAPFHGTAGFYLNELYSPFPGSVFAELMKKWLTAQYEADNGDISPMIAFV NSSIGIPFEMTNDGVKEDELAERGEDYAENTVPRGGLILTMGVDVQHDRLAVIIRAWGRG EESWLVWWGEIHGNTVDVKSDVWRKLAEMIFQTAYKHETGAGMKIAAVSIDSSDGNTSDA VYHFVRGCRGVKAVNVMAVKGSTNPDKEIFSRARAIDLKHKNTKADKFGVQVYSVGVSRA KDLLIDEHARINLEGSGAGRMHFYKDVRADYCGQLLSEVKVPSRMNKHKKVWQKKVGVRN EALDCEVYALHAARSVGTHTMSAAKWALYENALLQSELFAEPKPAEQVQEKTKTDSGSGF AATRRRKGGNFVTNY >gi|289656340|gb|ADEA01000027.1| GENE 18 18433 - 18924 428 163 aa, chain - ## HITS:1 COG:no KEGG:HCH_02893 NR:ns ## KEGG: HCH_02893 # Name: not_defined # Def: phage DNA packaging protein, Nu1 subunit of terminase # Organism: H.chejuensis # Pathway: not_defined # 1 156 1 157 174 89 39.0 4e-17 MKVNKRQLADIVGVTEQALTNWQKEGLPVAAYADKNGLANEYDTVAVIRWLLQRELERLN KEKPRDRLDRVKAELAELERDEKLGQLAPAAMFERAWGDHVLAARTEFLTMPEQLAAELT ATSGVEIDPDIIAAYINRALEKLSNYGAENDGDDSRNHAGADG >gi|289656340|gb|ADEA01000027.1| GENE 19 19024 - 19686 1 220 aa, chain - ## HITS:1 COG:no KEGG:Spro_4925 NR:ns ## KEGG: Spro_4925 # Name: not_defined # Def: hypothetical protein # Organism: S.proteamaculans # Pathway: not_defined # 14 199 19 216 238 85 29.0 1e-15 MSCIAVDLGGVFAHLDDVARRQIPFAAKNTVNKLAANVIEAEQAEMASVFGNPRQWTLNS LFVRQYADKHNLTAIVDFKDSASNRSAGKYLQAQIYGGTRKTKGIERFLVSRGLMPAGFR IVPSDSVRLDQYGNITLAAFRSMLRGINDGRNFALTRTRGRLKPGIYRRNKKGVRALVMY VSSAEYEKRMRYFETARQAVERNSGQIAAAELENALRTAR >gi|289656340|gb|ADEA01000027.1| GENE 20 19840 - 20223 87 127 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298369849|ref|ZP_06981165.1| ## NR: gi|298369849|ref|ZP_06981165.1| DnaJ protein [Neisseria sp. oral taxon 014 str. F0314] # 1 127 1 127 127 239 100.0 5e-62 MTIDDLLERWAVWRSARTENGLGYAESALNRLMSGAVNTGGARPSSLPYGVDADSVFTLV DSAVMRLPRFHREVIKVHYSDGFNSRRTKAAECGCSGASFYRYLSDAEAMLAVSLRDSEA SRLLNDF >gi|289656340|gb|ADEA01000027.1| GENE 21 20492 - 20668 312 58 aa, chain + ## HITS:1 COG:no KEGG:plu3492 NR:ns ## KEGG: plu3492 # Name: not_defined # Def: hypothetical protein # Organism: P.luminescens # Pathway: not_defined # 1 57 1 57 57 64 63.0 1e-09 MKQSEFLKWLMAQGVETKDGTRHIKLYYKGKQSHLPRHPSKELKTGLVEGIKKQLGLK >gi|289656340|gb|ADEA01000027.1| GENE 22 20704 - 21120 576 138 aa, chain + ## HITS:1 COG:Z2281 KEGG:ns NR:ns ## COG: Z2281 COG1598 # Protein_GI_number: 15801705 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 EDL933 # 1 135 8 142 145 132 52.0 3e-31 MYYPAKFTPAKEGGYVVTFRDIPEAITQGDDMTEAVEMAEDVLQSAMDFYFEDQRPAPLP SAPEEGERLVALPLSVYSKVLLLNEMLAQDVSKSELARRLETTPQEVQRITGLHHATKID TVVRALAQLGKQLEIRLA >gi|289656340|gb|ADEA01000027.1| GENE 23 21547 - 24384 2140 945 aa, chain - ## HITS:1 COG:XF0505 KEGG:ns NR:ns ## COG: XF0505 COG0358 # Protein_GI_number: 15837107 # Func_class: L Replication, recombination and repair # Function: DNA primase (bacterial type) # Organism: Xylella fastidiosa 9a5c # 32 299 29 298 350 115 32.0 5e-25 MNKLDFKGVADAALNSVDNLLSEWLPGGKYKGHEFFALNPTRADKSLGSFAVNTHSGAWA DYATGDAGGDLVSLYAYLFCGGKQGDALRQVAERLRIGGFEPVARTEWDGSPKTGGKSKR NSWTPIAPFAEHLLQNLNGAKVYRYCKKDSVDSLRAVYRDAAGRPLCVVQRFTDDSGRKS DLPFVWAKNSEGVEQWCNRRLQDPQPLFGLDALAAKPSARVLIVEGEKCKMAAESYFDLK DWAVISWLGGCNGWGKADWSAVSGRDVLLWPDCDSQREKLGKAEEAAGVKPEDKPYLPRS EQPGMKAMLGIAEKLLKQDCTVRIANIPDAGYWPSGYDIADVIQDTEPLVSVREMLDTAV PYPFTESSLESSVPMACDFSHAAESGDSGAEMPVEDDDGNPTKRLAALLEGYAQIGLKQK VLNLDTCETFTVKQLEKLFGKTAVATWFKLDARKQLGDVEADIYLKRKKLEISATVDDEF KDALNRYIYLDGTTDAFDRNLKRIVSLAAVNAAIPDRYQDWGKSPLRLVCPMSNYHFDPA IEQGVVMMDDGSGVKHINMFNGLPVKVGEVDKSLKGKSIGYLIEAFPECRNIIRLIYHLC SGNGDDGTNARAAEWVLNWLACRVRQPAEKPATALVFISETQGVGKSTFGEKIVKALFGE YTRQLDQNALESRFNSALLFALVTIFEEISPSDERLNVIGKLKNMITSDVIMVERKGRDA EKHGDFNSFIIFSNDERSIPIESNDRRFMVVNCNKKFSDAQYEALQEELDNGGIRHFAEF LHALPLTYQEDGEERKFSPHTKPLMTPIKKRMISLNKPSWEAFLDDWREGDLDVPYVTCA ATDLWAVYKRWAHNTKTFHLQQKNFYANIGKRLEEKRSDVALREGWKKVRFFIVPHEQLS EAARKKYPPPTTDRAERGSQGSVNKADYYGKQISDFRIAAELAEF >gi|289656340|gb|ADEA01000027.1| GENE 24 24386 - 24625 171 79 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298369853|ref|ZP_06981169.1| ## NR: gi|298369853|ref|ZP_06981169.1| hypothetical protein HMPREF9016_01187 [Neisseria sp. oral taxon 014 str. F0314] # 1 65 1 65 79 108 100.0 1e-22 MENDKNQSLYEQAEQWLKTLYSVHVTESAIARRFGIGIFEAAALAESLEAAGILGYECPP FGQRENRVRRRGKRNRKAV >gi|289656340|gb|ADEA01000027.1| GENE 25 25071 - 25772 648 233 aa, chain + ## HITS:1 COG:NMB0910 KEGG:ns NR:ns ## COG: NMB0910 COG2932 # Protein_GI_number: 15676805 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Neisseria meningitidis MC58 # 1 233 3 238 238 181 43.0 1e-45 MNEKTARLYEAAEKLKGIKGQSNLARFLNTSPQTLNNWESRGVSSKGLIEAAKAIGASVE WLETGTGSMDGSHTPESNATVIGTVDAWDSRTPLSGDDCEVPFYKDIHLAAGNGFSDDIE DYNGYKLRFSKATLRRHGISPAAVICVCADGDSMEPVFPDGATLGINTADKTVKDGKIYA VNHGGLLRTKILQKLPGNKIRIRSYNAEAYPDEEADAADINIIGRVFWWSVMD >gi|289656340|gb|ADEA01000027.1| GENE 26 25850 - 26287 336 145 aa, chain + ## HITS:1 COG:no KEGG:NGK_0650 NR:ns ## KEGG: NGK_0650 # Name: not_defined # Def: putative phage associated protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 1 145 1 145 145 253 88.0 2e-66 MELTVHFNAEQDLDRFFEKDEEAVGYLDAVIEMIQANSAIFDGLYENKYFREYGEPIGPL DLEVKPILSLWKKDIKVLRVRFGSEEAAGYRIIYAPCHEKQPNGAYIRRIDILAVVNKNT DKFNYQLDHPITQRIIKDYEELYSN >gi|289656340|gb|ADEA01000027.1| GENE 27 26265 - 26765 244 166 aa, chain + ## HITS:1 COG:no KEGG:NGK_0649 NR:ns ## KEGG: NGK_0649 # Name: not_defined # Def: putative phage associated protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 22 166 1 145 145 233 89.0 2e-60 MKNYTQTNGTWVPMGATLTIAVAACIVSTPTPATPVTHINCLRINGQIKCVKPISPNTTP AAEHIEHVRKNPRRKAAMDRAAAKIADKITRKAGGETFVSLRMKKGFTQSELAAAAGLRQ PYLSRIENSKQSLHNETVQKLANALGVSPLEVRAAFEQQYEYMEQA >gi|289656340|gb|ADEA01000027.1| GENE 28 26762 - 27175 269 137 aa, chain + ## HITS:1 COG:no KEGG:NGK_0648 NR:ns ## KEGG: NGK_0648 # Name: not_defined # Def: putative phage associated protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 1 137 1 137 137 221 79.0 7e-57 MIHLNVHYCDEIIRHAENDKYSLIGIFTDECHIPTQQFILGRLCLSISFSAEGGYMQALQ TQPTFLEIVRNDDVISEFEIPPYDGGGTGENVSFMLHQTVSGLPVSDGDRIYVRMKTHSH IISESHPLFFTWLPYHS >gi|289656340|gb|ADEA01000027.1| GENE 29 27377 - 27664 295 95 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298369858|ref|ZP_06981174.1| ## NR: gi|298369858|ref|ZP_06981174.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 95 1 95 95 133 100.0 3e-30 MKKQNQVAQYLKPEASRARKAVFDAVARMTVDKERAKNIGMENAIKELESARKHVLRKFK EMVDFRIEAENKTLSESVLEAAPFSIAAAKSFNAC >gi|289656340|gb|ADEA01000027.1| GENE 30 27798 - 28157 497 119 aa, chain + ## HITS:1 COG:no KEGG:NMB0907 NR:ns ## KEGG: NMB0907 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis # Pathway: not_defined # 1 118 1 118 119 175 83.0 6e-43 METQEKKFVPASKQIPTVNGGWLDRELGEAMSEAVRACLAHGKQAEVTVKLKISPQNISH GTVKISHDVTAKLPKEKREGGIVFATPDGNIQADDPAQGKLELKDPSKPEKPLKFAQAK >gi|289656340|gb|ADEA01000027.1| GENE 31 28209 - 29066 818 285 aa, chain + ## HITS:1 COG:NMB0906 KEGG:ns NR:ns ## COG: NMB0906 COG5532 # Protein_GI_number: 15676801 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis MC58 # 3 283 4 284 284 427 75.0 1e-120 MEKQNMIESALQAAQKPFIETAPNGTPIIFWPAENGEWEYEKCPELMQTPTRKSGTFEMH DTASLIKFVQKHKQEGTQIYIDADFKSGKIAVKAAINGHTANAADWFDFSAIYQPRHTAA AENWLKYNIEKMNQAQFAHFLTNNARNIVSKNPANDAAVYPTAAEVLDFALNLEYTEKTT FKQGYREQDGRINFTFQSEDAGQTEKQLKMFERFGLSFTPYQGGDSYFVEALLKFRIDKN SGALVLWYELQQIDAVIEQAAQDIATSLQTAFADIDIYFGAISNL >gi|289656340|gb|ADEA01000027.1| GENE 32 29111 - 29317 324 68 aa, chain + ## HITS:1 COG:no KEGG:NMA1880 NR:ns ## KEGG: NMA1880 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_A # Pathway: not_defined # 4 68 10 79 80 64 51.0 1e-09 MKSLLIAALAVILQACTTTETEPVYQHETEAQRIIREQQDAADFAVIELENTYARMTDEE RMRGIVYE >gi|289656340|gb|ADEA01000027.1| GENE 33 29338 - 29475 191 45 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MELITTVAAAALIIFLLAAVIITTTEILVQQRINQILDFLNRDDD >gi|289656340|gb|ADEA01000027.1| GENE 34 29522 - 30037 586 171 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298369862|ref|ZP_06981178.1| ## NR: gi|298369862|ref|ZP_06981178.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 171 1 171 171 304 100.0 1e-81 MKVAKATEDDQNAIYKILGALESISNGEMPGIEDDIEDDEGIGRYRLHEALNAGENEYVP DEINYFIRRAIKHLLNVYSSAHPMRAAVNLSALLDNQNEIVDPDNSTLEIHPKIEQGLAD TERLNWLLSNGMSKLSKDVMFGSNTDSSNYRAQIDVLMEAESKAMKDLANE >gi|289656340|gb|ADEA01000027.1| GENE 35 30030 - 30245 72 71 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298369863|ref|ZP_06981179.1| ## NR: gi|298369863|ref|ZP_06981179.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 71 1 71 71 131 100.0 1e-29 MNSAKNEYTFSYVFGGRKWSTSVWADSPDEAKRKIRAQAAAVYDGEVVMKLPLPVKASWL NRLINWIKNHG >gi|289656340|gb|ADEA01000027.1| GENE 36 30238 - 30585 416 115 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298369864|ref|ZP_06981180.1| ## NR: gi|298369864|ref|ZP_06981180.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 115 1 115 115 229 100.0 6e-59 MDKTEIELFEKWYADFDGSADCQENLAKDGSGHYLLTETSLLYAGWTASRKCNRWNSIDR SIPNIGETVIVHTENGNIFSDIYVEGYDGDYFETAEDFNEQVTHWQPLPMPPQEE >gi|289656340|gb|ADEA01000027.1| GENE 37 30599 - 30880 266 93 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|255066363|ref|ZP_05318218.1| ## NR: gi|255066363|ref|ZP_05318218.1| transcriptional regulator, TetR family [Neisseria sicca ATCC 29256] # 1 79 1 79 79 87 60.0 3e-16 MSLSHRIHYADTVNQPNIGYRYKDGKWQVIEYMLPQYNKKHWTKMNAGFRRKGKVLQEFK TQESAAEYAEKIRNEGKANGKPTDTTTSITYLR >gi|289656340|gb|ADEA01000027.1| GENE 38 30834 - 31100 346 88 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298369865|ref|ZP_06981181.1| ## NR: gi|298369865|ref|ZP_06981181.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 88 34 121 121 152 100.0 9e-36 MENLPTQQRLLLIYGKTHITLEQAVADWMPHINIERAKRRAKTQTLPWPVISSEDSQKSG LFVSLAAIAEWLDLREQEAQENWKKMNQ >gi|289656340|gb|ADEA01000027.1| GENE 39 31142 - 31384 236 80 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298369866|ref|ZP_06981182.1| ## NR: gi|298369866|ref|ZP_06981182.1| hypothetical protein HMPREF9016_01200 [Neisseria sp. oral taxon 014 str. F0314] # 1 80 1 80 80 154 100.0 2e-36 MEIGCWPTRPRISDLISRLEELKAEHGDLPITYEPLRGGVNYADVSKFRVAYVRPKEKRE RIWSYRIGEPEDGDLKVLKF >gi|289656340|gb|ADEA01000027.1| GENE 40 31403 - 31648 216 81 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKEYVFKISVIDGKMKVYLPSISLNNDSTLPDLMAALTFEFIQSMSNDAIKDQKKFMEGA IDTLRTAKMIEAISKSRERPT >gi|289656340|gb|ADEA01000027.1| GENE 41 32324 - 34402 3400 692 aa, chain + ## HITS:1 COG:NMB1493 KEGG:ns NR:ns ## COG: NMB1493 COG1966 # Protein_GI_number: 15677346 # Func_class: T Signal transduction mechanisms # Function: Carbon starvation protein, predicted membrane protein # Organism: Neisseria meningitidis MC58 # 1 686 1 686 693 989 76.0 0 MKALKSFLIWGLVVLVGVIAFATLALSRGEHISAVWLVVAAVSVYCIAYRFYSLYICKNI LELDARRMTPAERHNNGVDYVPTNEKVLFGHHFAAIAGAGPLVGPVLASQMGYLPGTLWI IFGVILAGAVQDMMVLFISMRRDGKSLGDIIKQELGTTAGIIASIGILMIMIIITSVLAL IVVKALTHSPWGTFTIAATVPIALFMGVYARFIRPGRIGEISIFGFAGLLCAVIFGNHVA QSPIGNWFNLDGVQLAIGIMLYGGISSLLPVWLLMTPRDYLATFLKIGTILALAVGIIIV GPELKMPAVTHFIDGSGPVFAGGLFPFLFITIACGAVSGFHALISSGTTPKMIENETHVR AIGYGGMLMESFVAIMALSAACVLEPGVYFAMNSPAALIGTDAANAAQVITNQLQVPVDA ATLLNTAKEVGEHTILSRAGGAPTLAVGMAHIMSQLIPGEAMMAFWYHFALLFEAMFILT AVDAGTRTSRFMFQDLLGTFSKSLGTTGGMPANVIATLLTVGSWGYFLYTGVTDPLGGIN SLWPLFGIGNQMLAGIALIMAAVVLVKMKKERFIWVPIIPAIGLLVTTAVASVQKLFDDD PRVSFLAHAAKYREAAAAGQVLSPAKDISQMGQIVLNDYVNSGLCAAFMLVVLFVAIYGL VVALKARKVAWPTAKEIPAVYRDEVQNNETAA >gi|289656340|gb|ADEA01000027.1| GENE 42 34386 - 34598 162 70 aa, chain + ## HITS:1 COG:NMA1699 KEGG:ns NR:ns ## COG: NMA1699 COG2879 # Protein_GI_number: 15794592 # Func_class: S Function unknown # Function: Uncharacterized small protein # Organism: Neisseria meningitidis Z2491 # 12 70 4 64 64 71 59.0 4e-13 MKRLLKHPLVDRLKKAYRNACIAANYMAGIPDYDRYVAQQRKHNPNAPVMTRSQFVDYCR IKSNGNGRCC >gi|289656340|gb|ADEA01000027.1| GENE 43 34775 - 35245 650 156 aa, chain - ## HITS:1 COG:no KEGG:NMA1697 NR:ns ## KEGG: NMA1697 # Name: not_defined # Def: putative lipoprotein # Organism: N.meningitidis_A # Pathway: not_defined # 77 156 47 126 126 119 73.0 4e-26 MKVKALLAIAAALALSACVVADDPYYDDYSRENSARDYDHYDHGPRYRDRDDRDYRNDRD YRDDRRSRRNSRIDSKFNCENGLSVQVRSLSPDRIELRLDDKRAVLSSDVSGSGERYTAG RGLFGKGAEWHQKGDEAFFSFIDPYGNKVDTSCRAR >gi|289656340|gb|ADEA01000027.1| GENE 44 35424 - 36443 1082 339 aa, chain - ## HITS:1 COG:SMa1188 KEGG:ns NR:ns ## COG: SMa1188 COG1477 # Protein_GI_number: 16263101 # Func_class: H Coenzyme transport and metabolism # Function: Membrane-associated lipoprotein involved in thiamine biosynthesis # Organism: Sinorhizobium meliloti # 1 318 1 309 334 224 43.0 1e-58 MNTPLTRRRFFAIAAFVAGGASLPFVWKRRQQGYGETKPAEDGEPIVWKGIALGSGAELR LYHTNRKTAELLVGKVLAEVARLEKIFSLYRDDSLISKLNREGRLNDPPADMLALLSLSS DIHKMTKGAFDPTIQPLWDMYAGYFRRHPNTETPPPQSEIEKALGLVGFDNVRFDNRTVA FAKKGMGLSLNGIAQGYITDKVVELLRKNGIRSALVDMGEIRGLDLDKRHTWQVGIRNPS DEEKVLLTVPLQNEAFATSGGYGTTMDEAGRFTHLFDPRTGVSTPRYRSISVMAATAATA DALSTAFSIMDEADIQTASRAAGAKTWLVMPDGSLQTIG >gi|289656340|gb|ADEA01000027.1| GENE 45 36547 - 37044 759 165 aa, chain - ## HITS:1 COG:NMA0765 KEGG:ns NR:ns ## COG: NMA0765 COG4314 # Protein_GI_number: 15793740 # Func_class: C Energy production and conversion # Function: Predicted lipoprotein involved in nitrous oxide reduction # Organism: Neisseria meningitidis Z2491 # 1 165 1 164 164 265 76.0 2e-71 MKKTLSALFTVLLLAACGGKSENTAPPAPQQITDASVGHYCTMNLSEHNGPKAQIFLNGK PDRPVWFSTIKQMFGYTKLPEEPKGISMIYVTDMGKVTDWTNPNADNAWIDAKKAYYVIE SGFVGGMGAEDALPFADKAQAEKFAQEKGGKVVGFDEMPEAYIFK >gi|289656340|gb|ADEA01000027.1| GENE 46 37041 - 37871 1333 276 aa, chain - ## HITS:1 COG:SMa1185 KEGG:ns NR:ns ## COG: SMa1185 COG1277 # Protein_GI_number: 16263099 # Func_class: R General function prediction only # Function: ABC-type transport system involved in multi-copper enzyme maturation, permease component # Organism: Sinorhizobium meliloti # 1 276 1 275 275 219 52.0 5e-57 MNPVWIITGKEVRDSLRNRWVLAATMLLAALALSLGFLGSTPTGSVKVDPLTVTVVSLSS LSIFLIPLIAMLLSYDALIGEIERGTMALLLSYPVSRVQILAGKFIGHIIILTLATAAGY GLAGIALQLANGGIDIAAWKPFALLIAASVVLGAAFLAMGYVISAKVKERGTAAGVAIGV WLFFVVIFDMTLLGVLVADSEQTITAPVVEGILLLNPADIYRLLNLTGYENTAMYAGMAG LSEQISLTVPVLLAAQVLWVFVPLVLAAWIFGRRQI >gi|289656340|gb|ADEA01000027.1| GENE 47 37868 - 38761 257 297 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 1 253 7 259 318 103 28 5e-21 MSTNHVELRNVTKRFGEQRAVNQVDLVLKAGESVGLAGHNGAGKSTIIKLILGLITPNEG EVMLLGERTGSKAGAQVRAQIGYLPETVALHPSLTGIETMAFYAKLKKQPLAKNRELLER VGILQAAGRRVGTYSKGMRQRLALAQALLGEPKVLLFDEPTTGLDPASRQMFYEVVRELN GKGATVLLSTHALAELDGHADRIVVMRNGVKVADGSMDELHIQSGLPLTVTVRLKERVPL SERWQHSDGLLYRAQCKAEERMALLGELGDLSRLNYIDIHTPTLDDMYAQLLKREEV >gi|289656340|gb|ADEA01000027.1| GENE 48 38867 - 40186 1759 439 aa, chain - ## HITS:1 COG:NMB0578 KEGG:ns NR:ns ## COG: NMB0578 COG3420 # Protein_GI_number: 15676483 # Func_class: P Inorganic ion transport and metabolism # Function: Nitrous oxidase accessory protein # Organism: Neisseria meningitidis MC58 # 92 435 1 344 344 561 79.0 1e-160 MLGGLFQTASAAVVSVPAGSNLAEAVAQAQAGDILKLASGVYKTKLYIDKPLTIEGPADR SAKIQGDRSGRTIAVHAPNVVLRNLTVTQSGLSLPAMDAGVYLEETAANALVENNNILEN SVGVYLHGPKNAMVRGNKIVGDTKLRVAERGNGVTVWNAPGSQVVGNDISQGRDGIFSNT STNNTYKNNRFSHLRYAVHYMYTNDSEVSGNISVGNNIGYALMFSDRLKIYGNIAVGSRD QGIMLNYVNYSDVADNVIYKADKCVFVYNANYNNLHGNYFENCNIGIHFTAAIEGTKLTD NSFINNESQVKYVSTRFLDWGEGGRGNYWSDNSSFDLDGDGFGDNAYRPNGVTDQIIWRA PVARLLMNSPAVSIVKWAQSQFPAILPGGVTDSKPLMKPFVNKTMTKYQAMKDRLIKEAQ SQKSEWNSAGNGAISGGGM >gi|289656340|gb|ADEA01000027.1| GENE 49 40444 - 42411 2770 655 aa, chain - ## HITS:1 COG:SMa1182 KEGG:ns NR:ns ## COG: SMa1182 COG4263 # Protein_GI_number: 16263096 # Func_class: C Energy production and conversion # Function: Nitrous oxide reductase # Organism: Sinorhizobium meliloti # 1 655 1 637 639 867 63.0 0 MSDEKLEQNGLSRRSFLGTAAASGAGLAGAGLLGLAGCSKNEGGDKGAASGAASAAKTES HGKPGEQTSEVGPGELDQYYGFLSGGQSGEMRLIGVPSMRELMRIPVFNMDSATGWGRTN ESLKILNATNTPETNQFLKDSGLRCYPNGDLHHPHLSFTDQTYDGRYAYANDKANNRVCR IRLDFMKTDKITEIPNVSGVHGLRPQRYPKTGYVFANGEHIVPVSGVGTWNDPKTWNAVY TAIDGETMNIAWQVLVDGNLDNGDADYQGKYSFSTCYNSERALTVQGASSNEQDWCVVFN LAAIEEGIKKGDFKEVNGVKMLDGRAEAKSPYTRYIPVPNSPHGCNASPDGKYIMLNGKL SPTVTVLDVSKLDDLFAGKIKERDVVVAEPQLGLGPLHTAFDGRGNAYTTLFIDSQMVKW NIDDAIKAYKGEKIDPVKQKLDVHYQPGHNHTTMGETKEADGKWLVSLNKFSKDRFLNAG PLKPECDQLIDISGDQMRLVHDNPTFAEPHDLCLVAASKVHPKKTWDRKDPWFWEDAVEQ AKKDGVELEKASKVIREGNKVRVYMTAVAPAFSVPQFEVNQGDEVTVYVTNVETIEDLTH GFTLEGYGIAMEISPQATQSVTFKAVRPGVHWYYCQWFCHALHMEMSGQMIVKPK >gi|289656340|gb|ADEA01000027.1| GENE 50 42482 - 44821 2192 779 aa, chain - ## HITS:1 COG:BMEII0975_1 KEGG:ns NR:ns ## COG: BMEII0975_1 COG3901 # Protein_GI_number: 17989320 # Func_class: K Transcription # Function: Regulator of nitric oxide reductase transcription # Organism: Brucella melitensis # 22 515 1 470 470 352 38.0 2e-96 MGGIKGRLQHVVSTLLAVLWLLVCCVPAYAERLPEFLNKVQPSEIFPSADRYGKPEGKPM VARVYKGDEQLGVVFITTDVVNTRGYSSKPIDTMIALSNDGTIAGAKLVAHNEPIMLIGI PQSRVDKFISNYVGLNFLKTPPKPGVAPADIISGATVTLMVINDSMQRSIKAIAHQYKLG TADAAVSAAPAEASGVQQAAASQAQVQTRPRRAVNMDKQDIQSWQALLDQKAIAKLHMTV DDVNKLFAQNGKQGSAEHAEPGPGDDIFIDMYVALVSQPSIGKSLLGEDGWQNLQSRLQP GQQAVMVAGEGRYSWKGSGYVRGGIFDRIEIIQGETSFRFVDSQHERLIDLAAEGAPHFK EVSWFVIPEGVEFDAAEPWRIQLMIQRVLSVNDKAFVTADLDYELPKGYYVDDPKAPPVE IAAPVETPAAQAASGVESGAGIAEAATDDGVSNQLWKQIWEAKRGQIVVVGIALTILLLV FLFQDVIVRYEKWYDRFRLCFLTFTLFYIGWYAQAQLSVVNTLTLFSAILTDFHWEFFLM DPIVFILWLFTAATMLLWNRGTFCGWLCPFGALQELTNRIAKRFGVKQITVPHLLHTRLS AVKYVIFFGLLAISLYDLGVAEHFAEVEPFKTAIILKFVRDWWFVLFAVILLVAGLFIER FFCRYLCPLGAGIAIPARFRIFDWLRRYKMCGNPCQICTHECPVQAIAPEGDIHPNECIQ CLHCQVMYHHQTRCPQVVATNKKKQKQAAAKADSKEQQEPEEQVVQFVKPSAKNIAVDN >gi|289656340|gb|ADEA01000027.1| GENE 51 45201 - 46214 1719 337 aa, chain - ## HITS:1 COG:NMB1574 KEGG:ns NR:ns ## COG: NMB1574 COG0059 # Protein_GI_number: 15677424 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Ketol-acid reductoisomerase # Organism: Neisseria meningitidis MC58 # 1 337 1 337 337 562 88.0 1e-160 MQVYYDKDADLSLIKGKTVAIIGYGSQGHAHAANLKDSGVKVVVGLRQGGSWKKAEAAGF EVLSVADATKKADVVMILLPDENQPVVYKNEIEPNLKQGAALAFAHGFNVHYNQIVPRAD LDVIMVAPKGPGHTVRSEFLKGGGVPSLIAVYQDKSGKARDIALSYAAANGGTKGGVIET NFREETETDLFGEQAVLCGGVVELIKTGFETLTEAGYAPEMAYFECLHEMKLIVDLIYEG GIANMNYSISNNAEYGEYVTGVEVINDKSREAMRNALKRIQTGEYAKMFIQEGAVNYASM TARRRLTADHQIEKVGAQLRSMMPWIAKNKLVDLDKN >gi|289656340|gb|ADEA01000027.1| GENE 52 46251 - 46544 591 97 aa, chain - ## HITS:1 COG:NMB1575 KEGG:ns NR:ns ## COG: NMB1575 COG1359 # Protein_GI_number: 15677425 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis MC58 # 1 96 1 96 97 157 87.0 5e-39 MSGIKIVALVTVKPEYTETLAAQFKELVKASRAEAGNISYDLHQEIGNPNRFVFVENWKS QAAIDEHNASEHFQGFVKAIDGKTDNLEIVLMNELSV >gi|289656340|gb|ADEA01000027.1| GENE 53 46628 - 47119 772 163 aa, chain - ## HITS:1 COG:NMA1765 KEGG:ns NR:ns ## COG: NMA1765 COG0440 # Protein_GI_number: 15794658 # Func_class: E Amino acid transport and metabolism # Function: Acetolactate synthase, small (regulatory) subunit # Organism: Neisseria meningitidis Z2491 # 1 163 1 163 163 259 93.0 1e-69 MRHILSILMENESGAMSRVVGLFSARDYNIDSLAVAATEDKTLSRMTIVTHGDETVIEQI TKQLNKLVEVVKVVDLNESRFVERELMLVKLRAAGKDRDEFLRLTEIYRGSVVDVTDRSY TIEITGSSEKLDSFLETVGRAQILETVRTGAAGIGRGERILKI >gi|289656340|gb|ADEA01000027.1| GENE 54 47116 - 48894 2206 592 aa, chain - ## HITS:1 COG:NMB1577 KEGG:ns NR:ns ## COG: NMB1577 COG0028 # Protein_GI_number: 15677427 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Neisseria meningitidis MC58 # 1 570 1 570 575 1030 90.0 0 MQLSGAQIIVQSLKAEGVEYVFGYPGGAVLEIYDAIFQLNKFKHILVRHEQAAVHAADAY ARVSGKVGVALVTSGPGATNALTGIATAYSDSIPLVVITGQVGTPSIGTDAFQEVDTVGI SRPCVKHNFLVTDINELAVTLKKAFQIAASGRPGPVVIDVPKDVTQAMAKFSYPQEDIFI RSYQPVVNGHTGQIKKAVQMFASAKRPVVYFGGGIVLGNAAQELTDFVRMTGAPCVGTLM GLGAYPSSDRQFLGMLGMHGTYEANLAMQNADVVLAVGARFDDRVVSVPSKFLEKTKKII HVDVDPSSIAKRVKVDIPIVGNVKNVLAEMNGLLSKRESAANRDGLDKWWKNIEKWRARD CLWFDNDSEIIKPQYVVQKLAEITGNSAIITSDVGQHQMFAAQYYPFQRPRQWLNSGGLG TMGVGLPYAMGAKLAAPEQDVFCITGEGSIQMNIQELSTCFQYHIPINVVTLNNGYLGMV RQWQELYYGNRESETYFDSLPDFVKLAEAYGHIGIRVDKKSDVEGALLEALNQKDRLVFL DFLTDKKQNVLPMVGNGKGLDEMVLPPHMRETEADSDVNDVNDRDYDTRSVP >gi|289656340|gb|ADEA01000027.1| GENE 55 49351 - 50583 1092 410 aa, chain - ## HITS:1 COG:L126168 KEGG:ns NR:ns ## COG: L126168 COG3525 # Protein_GI_number: 15673476 # Func_class: G Carbohydrate transport and metabolism # Function: N-acetyl-beta-hexosaminidase # Organism: Lactococcus lactis # 65 399 2 317 325 104 24.0 3e-22 MQERKLFGKFRHAAKLSLAAAAAAVMLAGAGCDPAVVKPEKPSNRAEGGKDGAGRGRIPA VAGKDNGLMLDIARHFYSVQVIKKFIDSVADSGGRFVHLHLSDDENYALESAILGQTAQN ALISDGIYTNPHTGKPFLSDAQLGEIVRYAHSRNVELIPEVDSPAHMAAVFRLLEQYRGK AYARSLKSNGADAEIDMAKPESIAFVESLIGEVSGKFKYGKRFHIGGDEFGYSRDSNSEF VRYANRLAGFVQSKGLRAQIWNDGIIKPTMKKLNHNIQITYWSYDGDTENPTAKKYRRKL RASMPELINEGFSVLNYNSYYLYFIPNEDLPRSGDGRFAAEDVRKNWHLGVWDGDNHQNA IRNPDKVQGAAVAIWGEDAPALSGEVIFEHTQDLLRAVMTKANKASAEKQ >gi|289656340|gb|ADEA01000027.1| GENE 56 51115 - 51786 1221 223 aa, chain + ## HITS:1 COG:NMA1767 KEGG:ns NR:ns ## COG: NMA1767 COG1999 # Protein_GI_number: 15794660 # Func_class: R General function prediction only # Function: Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems # Organism: Neisseria meningitidis Z2491 # 6 223 6 217 217 298 72.0 4e-81 MQITVRNLLAGVFAVTALAACQPKQDAAAPAASGTSASSTPSASAPAAPAANGKLHGTDL RKEDIGGDFTLTDGDGKPFNLSDLKGKVVVLSFGYTNCPDVCPTELLTQNDVLKQLGDQA KDVKVAFVSVDPERDTPEVIGKYAKQFNPDFIGLTATGDQSLPVIKQQYRVVSAKVNQGA DSNTYLVDHTAGAYLVDKNGDVAVFEPYGSEPAAIAADIKTLL >gi|289656340|gb|ADEA01000027.1| GENE 57 51887 - 52540 1046 217 aa, chain + ## HITS:1 COG:NMA1768 KEGG:ns NR:ns ## COG: NMA1768 COG0040 # Protein_GI_number: 15794661 # Func_class: E Amino acid transport and metabolism # Function: ATP phosphoribosyltransferase # Organism: Neisseria meningitidis Z2491 # 1 214 1 214 217 372 91.0 1e-103 MTNNALTIALSKGRIFEETLPLLAAAGIVPAEEPEKSRKLIIGTNRDNIRLVIVRATDVP TYVQYGAADFGIAGKDVLIEHGGSGLYQPLDLQIAKCRMMVAVRKGFDYAAASQPGSRLR IATKYPDIAAEHFAAKGVHVDIIKLYGSMELAPLVGLSDAIVDLVSTGNTLKANGLEAVE HIADISSRLVVNKAALKTKHALLEPIIQAFGSVVNKE >gi|289656340|gb|ADEA01000027.1| GENE 58 52632 - 53456 1038 274 aa, chain + ## HITS:1 COG:NMA1769 KEGG:ns NR:ns ## COG: NMA1769 COG3680 # Protein_GI_number: 15794662 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 274 1 276 299 419 78.0 1e-117 MAAKIKKFSDSTLSVLNNGERRFYVYCLTDLKKDKILYIGKGCDNRIFEHEQAARSQDGD LGDIDVPERKTIAKCKKLGRHIISYHLTEAEAQAAETTLIHFVKSVVDKKFKNKSAGCGA GSISAEELDSRFKFKPCPLDSLNPDGLILAVKIQDALDLDTDEEADYSFDNQDDANLKSR TLGNWVIGKDAASKVKYIIGIHTGLQNAVVSAYEVDGFETLEETKNGRKQTRYRFHTASS SKKVLAKLGLQQKCLPDLKFGSGSEKAYIRPKAD >gi|289656340|gb|ADEA01000027.1| GENE 59 53641 - 54933 1850 430 aa, chain + ## HITS:1 COG:NMA1770 KEGG:ns NR:ns ## COG: NMA1770 COG0141 # Protein_GI_number: 15794663 # Func_class: E Amino acid transport and metabolism # Function: Histidinol dehydrogenase # Organism: Neisseria meningitidis Z2491 # 1 429 1 429 429 770 92.0 0 MKKLNTQSPDFQAELKALLAFETAQNPEIDRIVADICADVQKRGDSALIEYTNRFDGTSA QTITDLILTQDDLQAAFERLQSEIQTALKTAAARVESYHQRQKMESWTYEDEDGTLLGQQ ITPLDRVGIYVPGGKAAYPSSVIMNAMPAHVAGVKEIIMVVPTPKGERNDIVLAAAFVAG VTKVFTVGGAQAVAALAYGTESVPQVDKITGPGNAFVAAAKRRVFGVVGIDMVAGPSEIL VIADGTTPADWVAMDLFSQAEHDEIAQAILIGTSQPYLDEVQAAMNRLIETMPRRDIIEA SLGNRGAMILAKDLDEACEIANYISPEHLELSVENPQEWAKKIRHAGAIFMGRYTSESLG DYCAGPNHVLPTSRTARFSSPLGTYDFQKRSSLIQVSEQGAQKLGKIASVLAHGESLTAH ARSAELRLKD >gi|289656340|gb|ADEA01000027.1| GENE 60 55141 - 55983 1246 280 aa, chain - ## HITS:1 COG:yeaE KEGG:ns NR:ns ## COG: yeaE COG0656 # Protein_GI_number: 16129735 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Escherichia coli K12 # 11 279 17 283 284 265 48.0 1e-70 MADGILRHGRLGMGTWCLGDRPETRLEEIAALRYGLEQGITIIDTAELYGGGRSERLVGE AVKPFAREEIYLVSKVLPANAGRRRLEQSLDASLKALQTDYLDMYLYHWRGSTPLQETVD ALEAAAAKGKIKSWGVSNFDLEDMQELLEDTDGGGRCRTNQVLYHLGSRGIEVVLKPYQD ERGIPTMAYCPLAQAGGLRSGLIDSPAVRQVAQEQGISGCQVLLCFALAQENMVSIPRTG KLAHMKELAACLQIKLSDEQLALLNRAFPVPERRVPLDVE >gi|289656340|gb|ADEA01000027.1| GENE 61 56192 - 57883 2379 563 aa, chain - ## HITS:1 COG:PM0041 KEGG:ns NR:ns ## COG: PM0041 COG4178 # Protein_GI_number: 15601906 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease and ATPase components # Organism: Pasteurella multocida # 10 562 16 557 564 410 40.0 1e-114 MNILKKFSRLARPFWTGAHGRIQWLMLAVLIGFTLCSITISVWIAAWDKRFYDALAAFDG ASMPALIVEYLGYMAMIIGCIVCGDWLQKRLIFRWRTHLTEQFQQNWLEGHKHYRLRLTG EPDNPDQRIAEDIYLLADKSIGLFRSFINNIAKFSAFVAVLWTLSGVQTFNIGGRDITIH GYLVWVALIYSVISTLIAHLVGRKLKNLNIDRQHREADYRAALLRVRDHAEQIAFYNGGE AETGRLKQRYLRIRDNWRRLTNCEFRQETFWATYVRISIFIPILATLPMYLAKTMTFGDM MQTRTSFARVQDSFGWFTDSYRRLIEWAAVVERLSGFQTALEQIEQEGRSAARPTSAPAL TLNNRRQSGILVLQNLTVHTQTGSPLLTDINLEAHAPEWVLLEGRSGIGKSTLLRALAGL WPYYQGSFALDGSLLFLPQRPYLPADTLRHTVSYPHPTCQDDRLIQTTLEQVGLGRLKDN LDEPYEWHGILSGGEQQRLSLARALLHKPQILFLDEATNQLDGESALALMQILKRALPDT LVIGISHQSEIKKLFEQKLVLDE >gi|289656340|gb|ADEA01000027.1| GENE 62 57986 - 58258 371 90 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298369888|ref|ZP_06981204.1| ## NR: gi|298369888|ref|ZP_06981204.1| hypothetical protein HMPREF9016_01222 [Neisseria sp. oral taxon 014 str. F0314] # 1 90 150 239 239 127 100.0 3e-28 MNKLHSDEIGSIHSDYQKKIENLNKEIAELQDRIEYISYQAQQVENDMRQEREKEFHLHR EQENLEYNRLSEENEKLRWELEQLRSKDSS >gi|289656340|gb|ADEA01000027.1| GENE 63 58905 - 61118 3061 737 aa, chain - ## HITS:1 COG:PA4168 KEGG:ns NR:ns ## COG: PA4168 COG4773 # Protein_GI_number: 15599363 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid # Organism: Pseudomonas aeruginosa # 51 737 128 802 802 341 34.0 3e-93 MNNTNKETLFKLSSLAFCLAALPQAVHAAEEVQQVELKQVNVVGKNRSLRTENQNSYTVS AMRSTTGLVLSPREIPQSVSVITKKQLEDQGVTSLEGALQNATGVNVFKSGGRTHFMSRG YFIEQLEEDGIATQIGSPGGFGLGGPSGDPTSVTDIAMYDRIEVVRGAAGLTQANNEPGG TINTVRKKPTSKRQLSADLTVNTWGKVGSTFDASGALSPEHGLRGRFVGSIGSNKTFQDQ SGGRDILLYGVMDKDIGDNSKLTWGASYLNQTKTPEPDGLPMRADGKEWKRSRYLGADWN EARLKKHNLFAEFEHYFNDNWKLSSKLDWRKSDSSKEYYTLGGTDNGIGADGLGKTYSFD RYDTDSRQFTFQNNLTGRIFAFGQSHDLFFMHSYSREKMNTGNRWFDDGSTYNADAFNGS EKAKPDWDADTAKSRGGNGSYRTHAFGLGARINPTDKLHVIVGGRYTNWHRNLYWDRNLK DSSEGTYYALKRNRFIPYAGITYDITPKQSVYAAYTSIFKQTMNRDYNDNLLPPIMGRNY EIGWKGEWNEGRLNTSVALYRTDKDNNNQRVNARPHPYWEPLDQSSRGLDAEISGSLTDR WQVYAGYTFNRSTNRNSVGDNVESRRKGYNFSSHTPKHMFRLYTSYILPMDDGKWTVGLG LKSSSKTANSSGSIKQGGYTIWNTNVQYRPNKNLQLGLAVNNLTDKRYYENQYSRAANSG SFYGEPRNAVFSLKWKM >gi|289656340|gb|ADEA01000027.1| GENE 64 61731 - 62567 1117 278 aa, chain + ## HITS:1 COG:NMB0981 KEGG:ns NR:ns ## COG: NMB0981 COG0560 # Protein_GI_number: 15676873 # Func_class: E Amino acid transport and metabolism # Function: Phosphoserine phosphatase # Organism: Neisseria meningitidis MC58 # 1 277 1 276 277 394 76.0 1e-109 MQTALILQSPSLTDRNSNVLAHFNLPAPVAGNNSLRFAVDSAFTLPAGEKEVLARQKIDH AILPDMAFEDLGLIVSDMDSTLITIECVDEIAAGVGLKDKVAEITERSMCGELDFEQSLR SRVALLEGLDSRVLEEVYENVLQLSPGAEFLLDECKKHNVKFMLVSGGFTFFTERLQQRL GFEYHYANVLEIKNGRLTGRLKGKIIDAQAKADLLRKYRSRLGLQPHQVLAMGDGANDIP MLKEAGIGVAYHAKPKTQANADACINFGGLERVRGWFR >gi|289656340|gb|ADEA01000027.1| GENE 65 62671 - 64479 2701 602 aa, chain - ## HITS:1 COG:NMA2019 KEGG:ns NR:ns ## COG: NMA2019 COG0173 # Protein_GI_number: 15794899 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aspartyl-tRNA synthetase # Organism: Neisseria meningitidis Z2491 # 1 602 1 602 602 1187 96.0 0 MRTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFATA DSARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDENISEN VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDLETSFL NEDEIMDITEGMAKQVFQDALGVDLGDFPRMPYAEAMFYYGSDKPDMRISLKFTELTDLM KTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYIKVNDVSN LSNGEDSGLQSPIVKFLSENALKEIIERTGAQNGDIIFFGADKAKVVNEAIGALRIKVGL EHGAENSYFVDEWKPLWVVDFPMFEYDEDGDRWAAMHHPFTSPKPGHEDLMASDPENCLA RAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGAPPHGGL AFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNAVDDKQLRELSLRLRQKATENK EA >gi|289656340|gb|ADEA01000027.1| GENE 66 64566 - 65255 924 229 aa, chain - ## HITS:1 COG:NMB0465 KEGG:ns NR:ns ## COG: NMB0465 COG2928 # Protein_GI_number: 15676376 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis MC58 # 15 216 15 216 233 307 77.0 9e-84 MAEHKAESGKIGKALKKYLITGVLVWLPIAVTIWVINYIVSASDQLINLLPLRWQPKNLI GFDVPGLGVILTVAALFITGLFGANVLGKRIISAWDGMLSHIPVVKSIYTSVKKVSESLL SDGSRSFKTPVLVPFPQPEIWTLAFVSGSIPQALQNSLPQDEEYVSVYVPTTPNPTGGYY IMVKKSDVRELDMSVDEALKYVISLGMVMPDELPVKLSEDGGQSGGRIS >gi|289656340|gb|ADEA01000027.1| GENE 67 65349 - 66491 1082 380 aa, chain - ## HITS:1 COG:NMA2021 KEGG:ns NR:ns ## COG: NMA2021 COG2829 # Protein_GI_number: 15794901 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane phospholipase A # Organism: Neisseria meningitidis Z2491 # 16 380 48 409 409 560 71.0 1e-159 MKFKQYMVLGAGFAVLSPMSWAADAALQCTTVEDNALRLACYDKVYAAQLPPVKPLPAAT EKAGVKTPVDLKKTVSEGLEKKEAVIVFDKPEHNVAEEDLHKAAESYSPLSAMYDLDKND TRGILSVREHNPMYLLPVWYNSSPNYSPHSPTRGTTSAERFSEQKRAEVKMQVSFKSKIA EDLFKSRADLWFGYTQKSDWQIYNQGRKSAPFRNTDYEPEIFITQPVKADLPFGGKLRMI GAGFLHTSNGQSRPESRSWNRVYTMAGMEWGRLTLVPRLWLPVFDKSNDDNDNPDIKDYM GYGDLKVQYRLDDKKNIYSVWRYNPKTGHGAVEAAYTFPLKGRLKGVVRGFHGYGESLID YNHKQNGIGIGLMFNDWDGI >gi|289656340|gb|ADEA01000027.1| GENE 68 66703 - 66966 407 87 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15676374|ref|NP_273510.1| 30S ribosomal protein S20 [Neisseria meningitidis MC58] # 1 87 1 87 87 161 96 2e-38 MANSAQARKRARQSVKQRAHNASLRTAFRTAVKKVLKAVEAGDKAAAQAVYKESVKVIDR IADKGVYHKNKAARHKSRLSAKIKALA >gi|289656340|gb|ADEA01000027.1| GENE 69 67255 - 68397 1853 380 aa, chain + ## HITS:1 COG:NMB0462 KEGG:ns NR:ns ## COG: NMB0462 COG0687 # Protein_GI_number: 15676373 # Func_class: E Amino acid transport and metabolism # Function: Spermidine/putrescine-binding periplasmic protein # Organism: Neisseria meningitidis MC58 # 1 380 80 459 459 642 89.0 0 MKKSVLAVLAALSLAACGGGQKAEPQAGAQASAANAGTPAATDTLNIYNWSNYVDESTVD DFKKQNKLKLRYDLYENNETLEAKMLTGKSGYDLVVPGIAFLPRQIEAGAYQKINKDLIP NYKNIDPELLKMLETADPGNQYAVPYFSGVNTLAITAKGKKILGGKLPENGWDLLFKPEY TNKLKSCGIALWDTPSEMFPIVLNYLGKDPKGSNPADIKAAAEVLKAIRPDVKRFSPSII DELARGEICLAAGNGGDLNLAKARSEEVKNNVGIEVLTPKGMGFWIESWLIPVDAKNVAN AHKYINYTLDPEVAAKNGIAVTFAPASKPAREKMPAKLVATRSIFPTAEDMKNGFVMPQM SSDAKKLSVNLWQKIKVGSH >gi|289656340|gb|ADEA01000027.1| GENE 70 68540 - 69241 867 233 aa, chain + ## HITS:1 COG:HI0735 KEGG:ns NR:ns ## COG: HI0735 COG2908 # Protein_GI_number: 16272676 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Haemophilus influenzae # 4 233 5 235 237 302 63.0 4e-82 MTVYFIADLHLSEARPDLTELFLHFMYGEAEKAQAVYILGDLFDFWIGDDERSVLTDTVK QAIRHLTGRGVKCYFIHGNRDFLLGKRFAAETGMILLPEYQTVDLFGRKTLICHGDTLCT DDVRYQQFRRKVHQKWRQKLFLLLPLPLRVGIAKKIRQTSKQDKQRKAAEIMDVNPQTVA ETVGRYGADLLIHGHTHRQNIHRNDGFTRIVLGDWKKDRASILKIDEHGFGFI >gi|289656340|gb|ADEA01000027.1| GENE 71 69328 - 70413 1511 361 aa, chain - ## HITS:1 COG:NMA0708 KEGG:ns NR:ns ## COG: NMA0708 COG1472 # Protein_GI_number: 15793686 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase-related glycosidases # Organism: Neisseria meningitidis Z2491 # 1 361 1 361 361 595 80.0 1e-170 MTRPIIPRGPVMADVNAFRLTDEEKQRLLDPAVGGVILFRRNFENVAQLKELVREIKAVR TPELIVAVDHEGGRVQRFIDGFTRLPAMNVLGRIWDEQGPAAAKAQAEQVGWVLAAELSA CGIDLSFTPVLDLDWGQCAVIGNRSFHHDAETVAELALALQKGLNRGGMKSCGKHFPGHG FVEGDSHHVLPQDGRSMAELEAADIVPFRRMSAAGMAAVMPAHVVYPQVDGNPAGFSAKW LKDILRRDIGFKGVIFSDDLTMEGACGAGGIKERARISFDAGCDIVLVCNRPDLVDELRD GFDMPDNAELAARWQYMANTLGADEAEKTMRTEAFRAAQEATARLASPKDTEGGVKVGEA F >gi|289656340|gb|ADEA01000027.1| GENE 72 70521 - 72044 2138 507 aa, chain - ## HITS:1 COG:NMA0709 KEGG:ns NR:ns ## COG: NMA0709 COG1757 # Protein_GI_number: 15793687 # Func_class: C Energy production and conversion # Function: Na+/H+ antiporter # Organism: Neisseria meningitidis Z2491 # 1 504 1 504 506 727 82.0 0 MELADYSHSFLSVVPAALALLLAVVTRRVLLSLGIGIILGAVLLAGGNPSNTLLHLKDMA VGLVWTEGGWSLGKFKILIFLLLLGVFTSLLTYSGSNQAFADWAKHHIKDKRGAKMLTAG LVFVTFIDDYFHSLAVGAIARPVADKFKISRAKLAYILDSTAAPMCVLMPVSSWGASIIA TLAGLLVTYKITGYTPMGTFVAMSLMNYYALFALIMVFVVAWFSFDIGSMARLEHAAQHE NHDEAQISDGVKGRVYALIISMLVLIFATVSAMLYTGSRSLETFSILGAFENTDVNTSLV VGGLSGVAAVLLTTVGAIKPSDYGTAVWQGIKSMFGAITILILAWLISTVVSEMHTGEYL STLVAGNINSGFLPVILFLLASVMAFATGTSWGTFGIMLPIAAAMAVKVDATLVIPCMSA VMAGAVCGDHCSPISDTTILSSTGARCNHMDHVTSQLPYALTVAAAAGAGYLALGFAKSA LLGFAVTGVVLAVLILMLKNKNAAQKS >gi|289656340|gb|ADEA01000027.1| GENE 73 72230 - 73726 2328 498 aa, chain - ## HITS:1 COG:NMB0532 KEGG:ns NR:ns ## COG: NMB0532 COG0265 # Protein_GI_number: 15677994 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Neisseria meningitidis MC58 # 1 498 1 499 499 661 70.0 0 MNKKHAYLAVVAASALVLGGCDKVESFFGNNDKSGELVQRIETKKNDGSVNMLLPDFAQL FEQEGQAVVNIQATKAVKSADNSEENSMDLSQFPDNDPFYEFFKRLVPNMPDMPEQDEGS DELNFGSGFIISQDGYILTNTHVVANMANIKVLLNDKRAYSAKLIGSDQQSDVALIKIDA KDLPVVKIGNPKDLKPGEWVAAIGAPFGFDNSITAGIVSAKGRSLPNENYTPFIQTDVAI NPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISFAIPIDVAMNVADQIKKTGKVQRGQL GVIIQEVSYDLAKSFGLDKAGGALVAKIMPNSPAAQAGLQVGDIVRSVNGEEVRASSDLP VMVGAIAPGKEVRLGVWRKGEEISVKVQLGSVGASVETGSSGSSNPAKQPDAAGFTVENT GLTLQVQNSDNKQHLIVTRVTGAAERAGLKRGDEILAVSQITVDDESTFRSALENAGKNV PLLVQRDGNTLFLALNLQ >gi|289656340|gb|ADEA01000027.1| GENE 74 74071 - 74703 854 210 aa, chain - ## HITS:1 COG:NMB0533 KEGG:ns NR:ns ## COG: NMB0533 COG0177 # Protein_GI_number: 15676439 # Func_class: L Replication, recombination and repair # Function: Predicted EndoIII-related endonuclease # Organism: Neisseria meningitidis MC58 # 1 208 1 208 209 413 95.0 1e-115 MNKRIRQEIFERFRAANPHPTTELNFNSPFELLIAVLLSAQATDVGVNKATAKLFPVAAT PQAMLDLGLDGVMEYTKTIGLYKTKSKHIMQTCRILLEKYHGEVPADRSALEALPGVGRK TANVVLNTAFGQPVMAVDTHIFRVSNRTKIAPGKDVREVEDKLMRFVPKEFLMDAHHWLI LHGRYTCKALKPQCKTCIINDLCEYPAKLM >gi|289656340|gb|ADEA01000027.1| GENE 75 74806 - 75741 1497 311 aa, chain - ## HITS:1 COG:NMA0718 KEGG:ns NR:ns ## COG: NMA0718 COG0181 # Protein_GI_number: 15793695 # Func_class: H Coenzyme transport and metabolism # Function: Porphobilinogen deaminase # Organism: Neisseria meningitidis Z2491 # 1 307 1 307 311 535 92.0 1e-152 MNPKKLVIASRESLLAMWQAKHIQGRLKALYPDCEVEILGMTTRGDQILDKTLSKIGGKG LFIKELEQALQDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEEMP KGTIVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLELD ERIRLILSEADSLPAAGQGALGIEIASHRTDLLDVLKPLNHDITRACVTAERALARALGG SCQVPLAAYCTEEDGLLTLRGLVGHPDGSVILQADAQAPAAYADALGRAVAKKLADDGAQ ELIEAVLAEQA >gi|289656340|gb|ADEA01000027.1| GENE 76 75901 - 76416 785 171 aa, chain + ## HITS:1 COG:NMB0538 KEGG:ns NR:ns ## COG: NMB0538 COG0319 # Protein_GI_number: 15676444 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Neisseria meningitidis MC58 # 1 169 1 169 169 265 82.0 3e-71 MKRAKKYPFLQLQRRRFVLNFENASAASGVPSEKDFYRWAWLAVKQRYRRADISLILLDE EEARAYNRDYRGKDYATNVLSFALNEGEILPDQFSDGLCGDLIICPQVVFKEAAEQGKTA EQHFAHLTLHGTLHLMGYDHIEDHDAEEMEALEIRLMQALNYPNPYREDEY >gi|289656340|gb|ADEA01000027.1| GENE 77 76418 - 77251 1512 277 aa, chain + ## HITS:1 COG:NMA0716 KEGG:ns NR:ns ## COG: NMA0716 COG4535 # Protein_GI_number: 15793693 # Func_class: P Inorganic ion transport and metabolism # Function: Putative Mg2+ and Co2+ transporter CorC # Organism: Neisseria meningitidis Z2491 # 1 274 1 274 274 423 84.0 1e-118 MDDSQSKPNFFERLISRLSGEPDSAEDVVNLLRQAHEQEVFDADTLFRLEKVLDFAELEV RDAMITRSQMNVIKENDGIDRIVAYIIETSHSRFPVISGDKDEVLGILHAKDLLKFMANP EQFNLQNILRPAVFVPEGKSLNSLLKELREQRNHMAIVIDEYGGVSGLVTFEDIIEQIVG DIEDEFDEDESADNIHAVSAERWRINAVTEIEDVNAFFGTDYSDEEADTIGGLVIQELGR LPVRGEKVVVGPLQFTVARADKRRLHTLMAVRVKEEN >gi|289656340|gb|ADEA01000027.1| GENE 78 77438 - 77842 655 134 aa, chain + ## HITS:1 COG:NMB0717 KEGG:ns NR:ns ## COG: NMB0717 COG2010 # Protein_GI_number: 15676615 # Func_class: C Energy production and conversion # Function: Cytochrome c, mono- and diheme variants # Organism: Neisseria meningitidis MC58 # 5 134 8 137 138 149 58.0 2e-36 MKTITTALTALILFSSAAYAAPAADAALMAKGKTVYEKNCAACHGKNGEGRAPVFPPLTK ADYIEGKPQVLAKAIVKGIRGPITVNGKPYNGIMPFIAMSDADAAALSTFVMNAFNNGGG TVTEKDIKQTRSQK >gi|289656340|gb|ADEA01000027.1| GENE 79 77846 - 78271 584 141 aa, chain - ## HITS:1 COG:no KEGG:NMC1698 NR:ns ## KEGG: NMC1698 # Name: not_defined # Def: putative secreted protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 40 140 40 139 140 118 51.0 8e-26 MDKRKKLLLAGVLLLVFAAVKVGALVWWQERQPAAKTAACDVRRGCTLPNGVYVKFGGTG AAKQPFDVELKNVPAAVGETGISFSMKGMDMGFNRFEFAQQGGGVWTAEQIRLPFCVENR RDYLADIYIGGEVFQVEFSAY >gi|289656340|gb|ADEA01000027.1| GENE 80 78275 - 79081 758 268 aa, chain - ## HITS:1 COG:NMA2032 KEGG:ns NR:ns ## COG: NMA2032 COG0494 # Protein_GI_number: 15794912 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Neisseria meningitidis Z2491 # 5 260 4 259 269 290 62.0 1e-78 MTEPDTRPLIRVVAGIILNGHGDYLLSSRPEGKPYAGYWEFAGGKVEAGETEFQALQREF EEELGIRIRRAVPWLTKIHSYEHARVHLRFMRVEAGWWTGELQAREGQAWSWQKAGDFTV SPMLPANGPLLKALSVPRSFTGRPDTGLEGENASGAYRVVPFGLAEPQHKHILIDETVLR ARGMMPEAESVWVRIQTASQWPHVQDADVVLWQVGNREAAEAVCGVLAGGVSMPLVVAAA PEWNASFRRRWLDAGAHAVLDCEETEAV >gi|289656340|gb|ADEA01000027.1| GENE 81 79159 - 79545 710 128 aa, chain - ## HITS:1 COG:NMA2033 KEGG:ns NR:ns ## COG: NMA2033 COG0736 # Protein_GI_number: 15794913 # Func_class: I Lipid transport and metabolism # Function: Phosphopantetheinyl transferase (holo-ACP synthase) # Organism: Neisseria meningitidis Z2491 # 1 125 1 125 125 193 84.0 6e-50 MIYGVGTDLVSLKRIVRLNKKFGMSFAERILSPEELLEFPQVGKPINYLAKRFAAKEAFA KAVGTGIRGAVTFRNVGVGHDALGKPEFFYAAPLAQWLKEQGIARVHLSMSDEEDTVSAF AVAEREAV >gi|289656340|gb|ADEA01000027.1| GENE 82 79613 - 80341 1282 242 aa, chain - ## HITS:1 COG:NMA2037 KEGG:ns NR:ns ## COG: NMA2037 COG0854 # Protein_GI_number: 15794917 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxal phosphate biosynthesis protein # Organism: Neisseria meningitidis Z2491 # 1 242 1 242 242 406 88.0 1e-113 MLLGVNIDHVATLRNARGTTYPSPVEAALVAETHGADLITLHLREDRRHMKDADVFAVKN AIRTRLNLEMALTEEMLENALNVMPEDVCIVPEKRQEITTEGGLDVLAQQDKVAQYVKTL TDAGIRVSLFIDADGGQIQAAHEVGAPVIELHTGAYADAPNHAERARQLARIENGAHFAA DLGLVVNAGHGLTIHNVTPIAQILAIRELNIGHSLIAQAVFLGLPEAVRQMKETMFRARM MP >gi|289656340|gb|ADEA01000027.1| GENE 83 80489 - 81364 1401 291 aa, chain - ## HITS:1 COG:NMA0790 KEGG:ns NR:ns ## COG: NMA0790 COG1108 # Protein_GI_number: 15793764 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Neisseria meningitidis Z2491 # 1 290 1 290 291 389 82.0 1e-108 MNFYDLIISPFVEFDFMRYALASIVFLALSAAPVGVFLVMRRMSLVGDALSHAVLPGAAV GYMAAGLSLPAMSIGGFAAGMLMALLAGLVSRFTSLKEDANFAAFYLGSLAIGVVLVSKN GDSVDLLHLLFGSVLAVDVPALQLVAAVASLTVTALAVIYRPLMLESIDPLFLRAVNGRG GVWHVLFLVLVVMNLVAGFQALGTLMSVGLMMLPAITARLWARNMGGLMLASLAFALVCG LGGLLFSYHVEIPSGPAIILWCGALYLFSVVFGKEGGMLTKWLKHRKHRTA >gi|289656340|gb|ADEA01000027.1| GENE 84 81432 - 82157 909 241 aa, chain - ## HITS:1 COG:NMB0588 KEGG:ns NR:ns ## COG: NMB0588 COG1121 # Protein_GI_number: 15676493 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn/Zn transport systems, ATPase component # Organism: Neisseria meningitidis MC58 # 1 241 11 251 251 368 75.0 1e-102 MSIIVDNLTVSYRSRPAVHHVSAEFADQSMWAVFGPNGAGKSTLLKAVMGLQKADTGCVR RIGLKRGDIAYLPQQSETDRSQPMTVFELAAMGLWYEIGFFGRVNAGQRQRVFDALERVE MADFAERQIAHLSNGQFQRVLFARMLVQDAKFLLLDEPFNAVDAKTTYALLEVLAACHTE GRAVIAVLHDYEQVRAYFADTLLLAREKIAAGATEAVLTEEYLRQADAAMQRHGSADWCE A >gi|289656340|gb|ADEA01000027.1| GENE 85 82450 - 83121 1039 223 aa, chain + ## HITS:1 COG:RSc3404 KEGG:ns NR:ns ## COG: RSc3404 COG0745 # Protein_GI_number: 17548121 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Ralstonia solanacearum # 1 221 1 220 221 251 63.0 1e-66 MRVLIVEDDNMIAEAVCANLKDSGYAVDRVKNGAQTAAAVQAQEYDLLLLDLGLPGLDGL QVLARLRSSGCQVPVLIVTARDDLHSRLHGLDGGADDYIVKPFDMAELQARMRAILRRNN GQSQPLLSNGVLTLNPATYQVQIAGQTEPVALSNKEFAVLQALMMRPGTIFSRSDLEDKI YGWGEEVESNAVDFLIHSLRKKLGKEHIRNVRGVGWLVEKGDA >gi|289656340|gb|ADEA01000027.1| GENE 86 83195 - 84508 1974 437 aa, chain + ## HITS:1 COG:NMA0670 KEGG:ns NR:ns ## COG: NMA0670 COG0642 # Protein_GI_number: 15793653 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Neisseria meningitidis Z2491 # 27 436 5 416 416 474 62.0 1e-133 MNDFIHTIKNSLQARLSLALAAATLLLAAAAGGFSFYATYQETEELQDDLLRQTAAHINP ASDHMAELPESDNDAHIFVQLPGSDGRFDIPAHLSDGFHNLTDDDDNYRAYLHRTDQGQV AVIQESEYREDLAENAAWRSTLPLLLSIPLSVALTVWIAHRTMRPVKKLSRSLGQRQDND LSPLAADDVPSEITGFVTAINRLLERTQENMRQQQRFIADAAHELRSPMTALSLQAERLN SMSLPPEAQQQSAVLQQSISRNRHLLEQLLSFARAQTLEVQRPKSLISLQTLFRRTIETL LPLATAKNQDIGAAVETECEIWADDTEIFTLVKTLADNAVRYTPEGGRIDLGFDETATHL VLWVEDNGNGIPAAERSRVLDPFYRILGTEQQGTGLGLPIAEAIAKRYGGRLVLTDSRQF AHGLLVKAELDKKRLQR >gi|289656340|gb|ADEA01000027.1| GENE 87 84614 - 84898 497 94 aa, chain - ## HITS:1 COG:no KEGG:NMC1683 NR:ns ## KEGG: NMC1683 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 93 1 93 94 132 73.0 3e-30 MKKILLTAVIALSAATAFANDYIEHRIYSDKNFEQNRAKAVRMLKDRGYRVHDVDADDFR GQPVLEVEAFRDGREYDIILSYPDLRIIRERIDY >gi|289656340|gb|ADEA01000027.1| GENE 88 85035 - 87203 2218 722 aa, chain - ## HITS:1 COG:NMA0731 KEGG:ns NR:ns ## COG: NMA0731 COG1198 # Protein_GI_number: 15793707 # Func_class: L Replication, recombination and repair # Function: Primosomal protein N' (replication factor Y) - superfamily II helicase # Organism: Neisseria meningitidis Z2491 # 1 721 1 728 729 1394 95.0 0 MIYHRIAVNVPLSDGLLTYSHSEPLPQGMRVLVPFRNKTVVGIVWETDIAPDMDAARILG VQTTFSDEPPLPESWRDLLSFTSRYYHYPTGQAVFAALPQGLKETRAVEMPQPPLFYALN EAGRAQTPPPARFNKKAALWDALLSGGMTIAALKQVNVQAVKLIEDWAEQGWIETTEAAK PVLRPSEFQLNADQQQASDEIQTAFGSFRPFLLYGITGSGKTEVYFDAMAKVLAQGRQVL FLLPEINLTPQLLKRVENRFADVPTAVLHSQMAAGKRTQDYLRAMLGQAKLVIGTRLAVF TPLPDVGLIVVDEEHDGSFKQDNELRYHARDLAVWRAKQSGCPVVLGSATPSLESWHKAQ SGAYRLLQLTERAHTAAQLPQVDILNVGRLKLDNGFSPQALQLLKQNFEAGGMSLVYLNR RGFAPALFCGDCGHTFGCPNCSAKMVLHQRARQLRCHHCDHREPIPFKCPDCGNQDLTAV GHGTQRVEETLRAFLPKAAVVRVDRDSTAHKNDWADLYRRIADNEIDILVGTQMLAKGHD FARLNLVIVLNADGSLYSADFRAPERLFAELMQVSGRAGRADKPGKVLIQTQLPEHPVFA AVKAQDYAVFAENELNERQMFAMPPFGFQTAVRADAPRVADAMEFLNAAKETLAPLLPAS VSQFGAAPMLMVRLAERERAQIFLESTSRQDLHRAVSLWVQVLQQNRDGKIRWSVDVDAQ EM >gi|289656340|gb|ADEA01000027.1| GENE 89 87406 - 88206 1354 266 aa, chain + ## HITS:1 COG:NMA0730 KEGG:ns NR:ns ## COG: NMA0730 COG1651 # Protein_GI_number: 15793706 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Protein-disulfide isomerase # Organism: Neisseria meningitidis Z2491 # 1 266 1 260 260 391 70.0 1e-109 MKNKLVKFLIPLTLLPLIACGQTNGSSKTASAPAVGSAASAKPAGGNVVETVKAKLEKTY AGQNLKVVSVSETPLKGIYEVIVTGKQVIYTDASGDYMLVGDLIDINKRQSITEERIAEL NKIDFSTLPLDKAIKEVRGNGKLKIAVFSDPDCPFCKRLEHEFEKMTDITIYNFMMPIPS LHPDAARKAELIWCQKDHTKVWTEWMRKGKLPENGKAGCNNPVAETTSLGEQLGFTGTPT LVFPNGRVQSGYSPMPMLKEIIEKNQ >gi|289656340|gb|ADEA01000027.1| GENE 90 88287 - 88961 892 224 aa, chain - ## HITS:1 COG:SSO2598 KEGG:ns NR:ns ## COG: SSO2598 COG0819 # Protein_GI_number: 15899325 # Func_class: K Transcription # Function: Putative transcription activator # Organism: Sulfolobus solfataricus # 1 224 2 214 224 146 38.0 4e-35 MSFSQEAWRRNAALYQATLNLPFNQELARGTLGREAFCHYVIQDAHYLEAYGRALAVCAA KASDAAGILQFAAFAQEAVEVEQQLHSGFMQQFGITDKQYAETPLTAACHHYTSYLLATA WSESYPVVLACLLPCFWIYAEVGKDIYAQSVPDNPYQAWIDTYAGEEFNESVRRVIAAVD AAAAVAAAETVRKMHAAYTAAAKLEWLFWDSAYHRRGWEGLEKF >gi|289656340|gb|ADEA01000027.1| GENE 91 89031 - 90092 694 353 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229232313|ref|ZP_04356740.1| (SSU ribosomal protein S18P)-alanine acetyltransferase [Cryptobacterium curtum DSM 15641] # 2 338 518 845 860 271 45 1e-71 MLVLGIESSCDETGVALYDTERGLLAHHLHTQMAMHAEYGGVVPELASRDHIRRVVPLTQ GCLQEAGVSYDDIDAVAYTQGPGLGGALLAGSGYANALAFALNKPVIPVHHLEGHLLSPL LAADKPEFPFVALLVSGGHTQFMAVRGIGDYTLMGESVDDAAGEAFDKTAKLLGLPYPGG AKLSELAKLGNPDAFSFPRPMLHSHDLQMSFSGLKTAVLTAVEKVRAENDGEIPEQTRND ICRAFQDAVIDVLAAKAKKALLDTGFRTLVVAGGVGANWKLRDEFSRLSVKKPSEKGKPK PKEEKIKVCFPPMEYCTDNGAMIAFAGAMRLQERQPAGAFNVKPRWPLSDIVK >gi|289656340|gb|ADEA01000027.1| GENE 92 90373 - 90741 594 122 aa, chain + ## HITS:1 COG:no KEGG:MS0269 NR:ns ## KEGG: MS0269 # Name: not_defined # Def: hypothetical protein # Organism: M.succiniciproducens # Pathway: not_defined # 16 122 17 123 124 125 63.0 5e-28 MTKAKSLMVTGILALFSASAFAAPLPSEIYRPAGAHTVKADHQGNGEFEYEAELSARHTS IPTLAKKVIAHAHSKGFRVVESEIKRDDADLKFRRGRQELDVSIESKDHGRIEYKADLDL NR >gi|289656340|gb|ADEA01000027.1| GENE 93 90813 - 92003 1380 396 aa, chain - ## HITS:1 COG:NMB1803 KEGG:ns NR:ns ## COG: NMB1803 COG0755 # Protein_GI_number: 15677641 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in cytochrome c biogenesis, permease component # Organism: Neisseria meningitidis MC58 # 7 396 6 395 395 558 81.0 1e-159 MTTNTDQTLPVHELLRRKSFIRSLNAADWIFALVIASAAVFVQTNIDFHMDIYEMVILWT SAGAAMLLGWFFKPMRWFILLCLALAYGALSLYRGDIGNADGFLLKYFLSSQSAIMWQCA FVFFALFAYISGAFVATRRNSETSTLLGMATVFAWISAVAGFTGLLVRWHESYLLRPDAG HIPVANLYEVFILFLVITALMYLYYEKRFGIRKLGGFVFAFMAVVVGFVLWYSVSREAHA IQPLIPALQSWWMKIHVPANFIGYGAFCIAAMLGIAELLALGCEDKGRKSWLPHSQVIEE VMYKAIAVGFLFFTIATILGALWAADAWGRYWSWDPKETWAFIVWLNYAVWLHLRLVAGW RGRILAWWAIIGLFVTAFAFIGVNMFLSGLHSYGTL >gi|289656340|gb|ADEA01000027.1| GENE 94 91987 - 94014 1758 675 aa, chain - ## HITS:1 COG:NMB1804 KEGG:ns NR:ns ## COG: NMB1804 COG1333 # Protein_GI_number: 15677642 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ResB protein required for cytochrome c biosynthesis # Organism: Neisseria meningitidis MC58 # 1 672 1 671 671 1093 77.0 0 MNNSPSSVPFVRRPWFAFLSSMRFAVALLSLLGVASIIGTVLQQNQPQVNYVVKFGPFWS EIFGFLGLYDVYASSWFVVIMLFLVVSTSLCLLRNVPPFLREVRSFRENAKEKSLASMRH SALLEGDIRPEIAQRYFDVEGFACKSVTRADGSVLVAAKKGGMNKWGYIFAHTALIVICL GGLIDSNLLLKLGIWSGRIVPDNQTVYAKDFKSESILGSGNLSFRGNVNISEGQSADVVF LNADKGLLVQDLPFSVELRKFHIDFYDTGMPRDFASDLVVTDKETGKKTERTIRVNHPLT LHGITIYQASFADGGSDLNFKAWNLSDASRNPITMKATSMRTFPLDFGGKRYQLEFDQFT GMNVEDMGGPSEKTDKGLKSALNDVRAVKQENKKYTNIGPSIVYRIRDKAGQAVEYKNYM LPIKQEDGYFYITGTRSGLDQQYRWLRIPADKAGKVDTFMALRELLKDDAARKRVVREAT VGAPDNIRVQFTRAAENTLSIFAQGGYLALNDFVVKNIPKAEQEKMQGYFYEMLYGTMNA ALDAAIKEYGLPAWKQDDARNRFLMYSMDAYTGLTEYPAPMLLQLNGYKEVRSSGLQMTR SPGAALVYLGSVLLVLGTVFMFYIREKRAWLLFSDGHIRFAMSSSRNERDLQKEFPRHLQ HLQQLAKDLNHDHKH >gi|289656340|gb|ADEA01000027.1| GENE 95 94282 - 94905 743 207 aa, chain - ## HITS:1 COG:NMA0658 KEGG:ns NR:ns ## COG: NMA0658 COG2863 # Protein_GI_number: 15793642 # Func_class: C Energy production and conversion # Function: Cytochrome c553 # Organism: Neisseria meningitidis Z2491 # 1 206 1 206 207 294 71.0 8e-80 MKRFTLLAFAVVSGMAAAAPKADLDKGKQIATTVCASCHAADGNSGIAMYPKLSAQHAAY IYGQTKAIKEGKRTTGASGVMKPIVMNLSEQDMHNVAAYYNKQQPKSGETSPKEEPELGA KIYRGGIADKKVPACMSCHGPSGAGIPGGGTDIAAYPRLGGQHKSYVIDQMKFYKSGQRA NAIMADIAGRMSDAEVNAVANFIQGLH >gi|289656340|gb|ADEA01000027.1| GENE 96 95052 - 95699 534 215 aa, chain + ## HITS:1 COG:NMA0656 KEGG:ns NR:ns ## COG: NMA0656 COG0218 # Protein_GI_number: 15793641 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Neisseria meningitidis Z2491 # 1 196 1 196 209 347 85.0 1e-95 MNYFKNAKFFTTVNHLQDLPDTPAEIAFVGRSNAGKSSAINTLTQHTRLAYVSKTPGRTQ HINFFELKNGGFMVDLPGYGYAQVPEAIRTHWIQLLGGYLQRRSQLIGLILIMDARHPLK DLDIRMLDFFHTTGRPVHILLSKADKLSKNEQIKTLASVNKSLKPYKERQRVSVQLFSSL KKQGIEEVNRIVGEWFEAHVQETENAQFSTIPPTP >gi|289656340|gb|ADEA01000027.1| GENE 97 95821 - 98184 1238 787 aa, chain - ## HITS:1 COG:NMA0655 KEGG:ns NR:ns ## COG: NMA0655 COG5009 # Protein_GI_number: 15793640 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase/penicillin-binding protein # Organism: Neisseria meningitidis Z2491 # 1 787 13 798 798 1267 80.0 0 MLGLALFGVGLIAIAILVTYPKLPSLDSLQHYQPKMPLTVYSSDGQVIGLYGEERRNFTK IKDFPKVLKDAVIAAEDKRFYEHWGVDVLGVARALIGNVVAGGVQSGASTITQQVAKNFY LSNERTFSRKFNEALLAYKIEQSMSKDQILELYFNQIYLGQRAYGFAAAAQIYYNKNVKD LTLGEASMLAGLPKAPSAYNPIVNPERAKLRQEYILNNMVEEKMITPQERDEALKEELHY ERFVQKIDQNALYVAEMVRQELYEKYGEEAYTQGFKVYTTVNIENQRVATEALRKVLRNF DRGSSYRGAENYLDLSKSDNVEETVGQYLSSVYTVDKMVPAVVLEASGKGIEIQLPSGRK VTLNHGSLGFAARAVNNKKMGDDRIRRGSVIRVKSTGKGWTVVQEPSLQGALVSLDAKTG AVRALVGGYDFYSKTFNRATQAMRQPGSSFKPFVYSAALAKGMTASTQINDAPLSLPGKG PNGSVWNPKNSDGRYSGYITLRQALTASKNMVSIRILMSIGVGYAQQYIQRFGFRPSEIP ASLSMALGTGETTPLRMAEAYTVFANGGYKVSAHVIDKIYDSQGRLRAQMQPLVAGENAP QVIDPRNAYIMYRIMQDVVRYGTARGALSIGRSDIAGKTGTTNDNKDAWFVGFNPSVVTA VYVGFDKPRSMGRAGYGGTIALPVWVDYMRFALKGTESKGMKVPEGIVAKGGEYYMKERL VTSPELTLDNSGSVPRPAAGRPRSPADEDGAPRRRSSGQADSSDNQGEVPVNPTNSGGNN KQLDSLF >gi|289656340|gb|ADEA01000027.1| GENE 98 98371 - 99477 521 368 aa, chain + ## HITS:1 COG:NMB1808 KEGG:ns NR:ns ## COG: NMB1808 COG4972 # Protein_GI_number: 15677646 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, ATPase PilM # Organism: Neisseria meningitidis MC58 # 1 368 1 371 371 417 61.0 1e-116 MRLPKSIKNTNTKASKTAGGLNNRTAIGIDISQHAIKMVQLAGRSLNQIQLEKYVITKLP KNVVKGNKIQDYDQLVTYLQHSYTQLRTSCKNFTAALPQSLATVEHAFYNSKETDLDLEE FAENEIAQISALEEVNYDYQTISKSTSSGSEQILLVAAKKDDIEPRIELFENAGMTLSAL DLDLFAQSNAFTFWINQHAPELSDEKVAVFGIYATQMYAIVMQNGHILYKQETPVSTEQL NQLIQRTYQVTEEKADQMMKSSSKPSDYQTQVADRFNVQVAQEIQRVMQFYYTTQSSDNF SNIKHILLTGTAAQQAGLAESIFSQTNTPTQCIHPAAYAARSNTVDLPQLQIDAPSLTLA FGLALRGL >gi|289656340|gb|ADEA01000027.1| GENE 99 99478 - 100068 525 196 aa, chain + ## HITS:1 COG:NMA0653 KEGG:ns NR:ns ## COG: NMA0653 COG3166 # Protein_GI_number: 15793638 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein PilN # Organism: Neisseria meningitidis Z2491 # 1 193 1 192 199 170 52.0 1e-42 MIEFTKINLLPYREEIKQRKKQQFNILMLSALLAGVGLSVLAYVSINSAISNQESRNQFL ETEISKLDTDLGEIKKLQQEKENFLAKKQKVEELQEKRSQAAYIIDTLNVLTPENTYLTA VNAENPTTYTITGRAMSDNKIAMLMRALPSTGVFSQPELLSIKKNDNYQEFTLRVLLNQS TPSVSVTETNPQSQEQ >gi|289656340|gb|ADEA01000027.1| GENE 100 100070 - 100741 446 223 aa, chain + ## HITS:1 COG:NMA0652 KEGG:ns NR:ns ## COG: NMA0652 COG3167 # Protein_GI_number: 15793637 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein PilO # Organism: Neisseria meningitidis Z2491 # 20 195 21 199 215 221 68.0 1e-57 MAAAKLKNIDLQNPHLLNAPAKFTIAGLVVAGVLAIGYFGVFKGQLETLSSEETKEVELK KTYTKKSIEAASLANLQAELSSIRSAFDVLLKQLPTDAEIPTLIQELHQAGATNGLRLDS VLPQAPVNDGPIQKLPYEIAITGKYNQISQFTRDVGKLSRIITLESLKIDQASANKDGKS DLLTLSATATTYKARPAEEVAAELAASTAGNENAAADASKNKE >gi|289656340|gb|ADEA01000027.1| GENE 101 100843 - 101328 248 161 aa, chain + ## HITS:1 COG:NMA0651 KEGG:ns NR:ns ## COG: NMA0651 COG3168 # Protein_GI_number: 15793636 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein PilP # Organism: Neisseria meningitidis Z2491 # 1 145 27 171 181 171 60.0 4e-43 MSDTRQEAKSHIIPFEAPTVTPPKAYVPPNYTGMNAFDSRRLNNILKGKNAPNLNRPKET LETFSLENLKYVGSLSKGNKVQGFVEAENHVYTVSPGNYIGQNYGRIQSITPDKLILTEL IEDSYGNWVYRNAELPLSGSGRDNQSASQASPNDSTAPVSN >gi|289656340|gb|ADEA01000027.1| GENE 102 101346 - 103493 1484 715 aa, chain + ## HITS:1 COG:NMA0650 KEGG:ns NR:ns ## COG: NMA0650 COG4796 # Protein_GI_number: 15793635 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component HofQ # Organism: Neisseria meningitidis Z2491 # 6 715 5 761 761 788 58.0 0 MKTNNITKIFAGISIAMVAQMSFAGNITDINVSTLPDNQKIVKIRFDRDVASPRGFVTTT PSRIALDFSKTNIRLPQPVLEYADPLLNRITAAQNNDRARILLGLNKAGQYNTEIRGQEV WVYVSESADKTAYKPVSTPRPATNNFVSSPAARTVSTTQTTANTNVDFHKGASNSGVIEL SAPSFTGEPEIKQQKDRVIITLKNNPLPTQAQRSLDVGDFNTPVRNVTLKRIGNATQLVI RNNGNWDIRTKSSSGRYTFEIVPKSATTESRGLNSNANKSFNGRKISLDFQDVDVRTILQ ILAKESGTNIVASDSVNGKMTLSLKEVPWDQALDLVMQARNLDMRRQGNIINIAPREELL NKDKATLQAQKEIEELGPLFSQTFQLKYKNVEEFRKILRLDDNGNSSGNDRNTLLSSRGS ALIDPATNTLIITDNHTVIQKFRKLIDELDVPTRQVMVEARIVEAEEGFSRNLGVKFGAA GAGSRNAWGSNWSNAQNNNNTNASFNRGEVGYRTWSLDPNVSLPTASATSSIALVRSLSS GALGLELSASEELGKSKTLSNPRVLTQDRKEAIIESGTEIPYQEATSSGATSVTFKKAVL GLTVTPNITPDGQIIMTVKINKDSPIDCQTDGLRTKCISTKNLNTQAMVEDGGTLIVGGI YEEENSNAVNKVPLLGDIPVVGNLFKSRGRSERRRELLIFITPRIMDGVGSNLRY >gi|289656340|gb|ADEA01000027.1| GENE 103 103958 - 104482 327 174 aa, chain + ## HITS:1 COG:NMA0648 KEGG:ns NR:ns ## COG: NMA0648 COG0703 # Protein_GI_number: 15793634 # Func_class: E Amino acid transport and metabolism # Function: Shikimate kinase # Organism: Neisseria meningitidis Z2491 # 4 171 1 168 170 230 68.0 1e-60 MPVMKPITGNLFFVGLMGAGKTTLGRHIAKTLDRPFYDSDHEICKCSGVSISTIFEVEGE QGFRSRETAMLKKLAAMKNIVLSTGGGAVLREENRICLRNNGTVIYLHACPETLLERTRH DTSRPLLQVENPLAKLRELYDSRDAVYRQTAHIVIESGNCQKTISKLLDILHNR >gi|289656340|gb|ADEA01000027.1| GENE 104 104582 - 105667 1470 361 aa, chain + ## HITS:1 COG:NMB1814 KEGG:ns NR:ns ## COG: NMB1814 COG0337 # Protein_GI_number: 15677650 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate synthetase # Organism: Neisseria meningitidis MC58 # 3 361 1 359 359 597 83.0 1e-171 MTMHTLTVQTPSHPYPIFIGHDLIGQADVLLKPYLGKKAAVITNETVAPLYLRAFQTALD KLGIPHFSIILPDGEKYKNWQTLNLIFDGLMQNRAERKTTLIALGGGVIGDMVGFAAATY QRGAPFIQVPTTLLSQVDSSVGGKTAINHPLGKNMIGAFYQPQAVLADLSTLKTLPEREL SAGMAEVIKYGALGDIGFFEWLEQNMADLMAQNQTKLARAVYHCCKMKADIVAQDETEQG IRAWLNLGHTFGHAIEAEMGYGVWLHGEAVAAGCVLAARLSEVLGKTTENDTRRIATLLE AAKLPSAPPKFAFEKWIGHMSHDKKVSSGVMRFVGLNRLGEADITEITDMEILRQTLQPY L >gi|289656340|gb|ADEA01000027.1| GENE 105 105840 - 106682 1149 280 aa, chain + ## HITS:1 COG:NMB1815 KEGG:ns NR:ns ## COG: NMB1815 COG0121 # Protein_GI_number: 15677651 # Func_class: R General function prediction only # Function: Predicted glutamine amidotransferase # Organism: Neisseria meningitidis MC58 # 1 280 1 280 280 533 90.0 1e-151 MCQLLGMNCNTPTDIMFSFEGFRRRGGITDHHADGFGIGFFEGRGVRLFHDDKPSANSPV ADLVRAYQIKSENVIAHIRKASQGQTSLANTHPFMREMWGEYWLFAHNGHLIDFYPEQGE YYHAVGTTDSERAFCYILNRLRNRFAAKPDAGTLFDAIAALTHEIRRHGLFNFVMSNGDC LFAHASTLLHYIVRKAPFGKARLLDDDVMVDFAEVTTPNDKVAVIATLPLTRDETWSQLA VDELVMFRDGDIVRSDRPKNPVYMSAEEGLEIARAAGVAV >gi|289656340|gb|ADEA01000027.1| GENE 106 106791 - 107255 630 154 aa, chain + ## HITS:1 COG:VC2272 KEGG:ns NR:ns ## COG: VC2272 COG1327 # Protein_GI_number: 15642270 # Func_class: K Transcription # Function: Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains # Organism: Vibrio cholerae # 1 147 8 154 156 154 51.0 5e-38 MKCPFCQHPNTQVTDSRLLEETNSIRRRRRCSECGQRFSTFETVEMRMPQVTKTNGARVA FNPHKLHTSLSRALHKRPVSPETIDETVALIEQRLYQLGRKEVPSKLVGEMAMEELAKID QVAYVRFASVYKSFNDVSEFTQAIATLPKDRPAE >gi|289656340|gb|ADEA01000027.1| GENE 107 107286 - 107873 842 195 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298369933|ref|ZP_06981249.1| ## NR: gi|298369933|ref|ZP_06981249.1| cytochrome c, class I [Neisseria sp. oral taxon 014 str. F0314] # 1 195 1 195 195 342 100.0 8e-93 MKPVLFIFAAALSALTACGKTDAPHTPPATASSAAVAEDAPAPAENTVQTLISKDNKIKI VVANGHFSDVSPDAGSLPENVSAEEMTLLQYDGMLGITLYADNLGPAQTDAKTYFANLKN ELQSAEGLTDVQVGIATDNRMNYRFSQTTAGGILNENCIAIHETNLYNVCANSNTASQEE LASVLKEVSLIKQTD >gi|289656340|gb|ADEA01000027.1| GENE 108 107888 - 108991 1283 367 aa, chain + ## HITS:1 COG:NMA0644_2 KEGG:ns NR:ns ## COG: NMA0644_2 COG1985 # Protein_GI_number: 15793630 # Func_class: H Coenzyme transport and metabolism # Function: Pyrimidine reductase, riboflavin biosynthesis # Organism: Neisseria meningitidis Z2491 # 147 364 1 218 223 270 63.0 2e-72 MFGENDVRMMQNALALARLGRFSTSPNPRVGCVIAHGGQIVGQGFHVKAGEPHAEVHALR QAGEMARGATAYVTLEPCSHYGRTPPCAEALIRSGVARVVAAMTDPNPLVAGKGLAMLEA ADIRTESGLLETEARELNRGFLSRIERGRPFVRIKCAASLDGKTALSDGLSKWITGEAAR EDVQILRAESCAVVTGVGTVLADNPQLNVRAFPTVRQPVRVIADSRLQTPPDCRIIRDGG SPVLIATLSQDADRLNAFSRFPHVEIIRPSEKDGRIDLADLLKILAAKGCGEVMVEAGAV LSSAFLAEDLADELVLYQAPKILGCPGRSMFTLPENPAALTESPCWETRSVETLGGDIKW ILRKTMG >gi|289656340|gb|ADEA01000027.1| GENE 109 109457 - 110761 2274 434 aa, chain + ## HITS:1 COG:PA3159 KEGG:ns NR:ns ## COG: PA3159 COG0677 # Protein_GI_number: 15598355 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetyl-D-mannosaminuronate dehydrogenase # Organism: Pseudomonas aeruginosa # 3 434 5 436 436 680 76.0 0 MKNITIQKFADKSAKIGIVGLGYVGLPLMLRYVDIGYKVLGFDIDAEKVNKLNNGETYIE HIPAEKIAAASNSLFEATTDFSRIGEVEAVILCVPTPLNKYREPDMSFVIDTTDAVKPYL RAGQVLSLESTTYPGTTEEELLPRVEEGGLKVGENVFLVYSPEREDPGNPDFETRTIPKV IGGHTPACLEVGLALYQPAIDKVVPVSSTKAAELTKLLENIHRAVNIGLVNEMKIVADKM DIDIHEVIDAAATKPFGFVAYYPGPGLGGHCIPIDPFYLTWKAREYGVNTRFIELAGEVN SSMPEYVVNKTALALNDHQRSIKGSKVLVLGIAYKKNVDDMRESPSVEVMELLRDLGAEI SYSDPHVPVFPKMREHKFDLKSVPLTAESIASYDCVVLTTDHDKFDYDLLKQHAKLIVDT RGKYSGKHDNIVKA >gi|289656340|gb|ADEA01000027.1| GENE 110 110776 - 111828 1807 350 aa, chain + ## HITS:1 COG:TM0585 KEGG:ns NR:ns ## COG: TM0585 COG0673 # Protein_GI_number: 15643351 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Thermotoga maritima # 9 348 2 347 360 218 36.0 1e-56 MFETISNRKIKFALVGCGRISNNHFGSFESLQDECELVAVCDTDPAALEAAVKRTGAKGY GRYAEMLAETDADVIVITTPSGLHPEQAVQALEAGFHVVTEKPMATRLHDGERMVQAADK AGKRLFVVKQNRLNATLQLLKRAVTEKRFGKICMVHLNVFWTRPQSYYDQGNGWRGTWEF DGGAFMNQASHYVDLMEWLIGPVEDVQAMISTHRNIEAEDTGVMNIRWRNGALGSMAVTM CTYPKNLEGSITILGETGTVRIGGMAVNEIQEWNFADERDYDEQVKNANYETTSVYGFGH PLYYKNVIDVLRGQAEPVTDGREGLKSLELIIAAYLSARDRKTVGLPLVY >gi|289656340|gb|ADEA01000027.1| GENE 111 111932 - 112870 1103 312 aa, chain + ## HITS:1 COG:XF2266 KEGG:ns NR:ns ## COG: XF2266 COG0578 # Protein_GI_number: 15838857 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Xylella fastidiosa 9a5c # 2 310 41 372 507 160 37.0 2e-39 MAHTSQSSSKLLHGGLRYLETGQFSLVQKALQARRFWLEQAPQFCRPLELLFPIYGKRGR PRWQIGIGTKLYDILARGSGFPRSRWLDRQEVLARNPNLLSDGLKGAYSFYDAQMDDYAL GKWVIGQCRQLGVEIRDGCKISSLDTLSGFDRIANAAGPWAMDLRKLQNGTPAYTIDWVR GSHIFIDRPQPHALMLPVPNEKRIFFILPYQGKTLIGTTEVRQDHPQAERPSENEIGYLL DAYNAYHREPLNRSDVGGSFSGVRPLLKSAANPSDATREWAFERVGNVLHIYGGKWTTSQ IQGEDAVKELLK >gi|289656340|gb|ADEA01000027.1| GENE 112 112867 - 113448 966 193 aa, chain + ## HITS:1 COG:PA3156 KEGG:ns NR:ns ## COG: PA3156 COG0110 # Protein_GI_number: 15598352 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Pseudomonas aeruginosa # 4 192 3 188 191 296 76.0 1e-80 MTDYTVHPTAIIDEGAQIGAGSRVWHFAHICGGAKIGKNCSFGQNVFVGNKVTIGDDCKI QNNVSVYDNVHLENGVFCGPSMVFTNVYNPRSLIERKSEYRDTLVKTGATLGANCTIVCG TTIGRFAFIGAGAVVNKDVPDYALMVGVPARQIGWMSEYGEQLEQLPLTGSGKAVCPHSG ETYILSDGILSKA >gi|289656340|gb|ADEA01000027.1| GENE 113 113491 - 114576 1688 361 aa, chain + ## HITS:1 COG:PA3155 KEGG:ns NR:ns ## COG: PA3155 COG0399 # Protein_GI_number: 15598351 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis # Organism: Pseudomonas aeruginosa # 1 355 2 357 359 531 75.0 1e-151 MQFIDLAAQQARIKKQIDANIEQVLSHGQYILGPEVAELEDKLKAYCGAKHCISVANGTD ALQIALMALGVGAGDEVITPGFTYIATAETVALLGAKPVYVDIVEQTYNLDPAKLEAAIT PRTKAIVPVSLYGQCADFDVINAIAARHNLPVIEDAAQSFGASYKGRKSGSLTTVSCTSF FPSKPLGCYGDGGAVFTDDDNLATVIRQIARHGQDRRYHHIRVGVNSRLDTLQAAILLPK LAILEEEIGLRGRVAAVYAQELAKAGIAAPFIESHNISAYAQYTVRVKNRDAVQTALKAA GIPTAVHYPIPLNKQPAVASDAVLPVGDLVAEEVLSLPMHPYMTEEQVRQVVGALAQALS R >gi|289656340|gb|ADEA01000027.1| GENE 114 114665 - 116089 1687 474 aa, chain + ## HITS:1 COG:NMB1818 KEGG:ns NR:ns ## COG: NMB1818 COG2244 # Protein_GI_number: 15677654 # Func_class: R General function prediction only # Function: Membrane protein involved in the export of O-antigen and teichoic acid # Organism: Neisseria meningitidis MC58 # 1 459 1 459 473 330 51.0 3e-90 MNIKKLLGYALGPIGSAAASAISLPLISWYFPADDIGRIVLLQTVSGLILIVLGLGLDQS YIREYHAAPDKSVLLNTVSLLPLLLSAACIAGILLAAPAMPSEMILELKQADLGVLCVVF MAALVPARFLSVVLRMQERAYAFSFSQLMPKLLILVLVAGYMLTGAANSTFNLVAAYAAA QWLALAVLSVQTRRDAARAWKAYSDPALLKETLKYGVPLVLGGLAYWGLTSVDRLMLKQH GSLAELGIYSMAVSFGAAALIFQSIFSTIWAPMVFRWVNENENLDRIAKIVPPMLAAAAA VLCLAGIFSPLIPLILPSKYAAVQFILLSSILFPLLYTMTEVTGIGINVSRKTWLVTVIS VIALAANFALCRLLVPAFGAKGAAASMAVSFWLYFALKTEASVLLWQKLPRTKIYGTTLI CLFSCLAYTFWGSRGNYPLFAAGWAAALAGIGFAYRTQLVLLAERIAGRLKKAA >gi|289656340|gb|ADEA01000027.1| GENE 115 116109 - 117287 1549 392 aa, chain + ## HITS:1 COG:NMA1057 KEGG:ns NR:ns ## COG: NMA1057 COG0438 # Protein_GI_number: 15794006 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Neisseria meningitidis Z2491 # 190 383 6 199 230 192 52.0 7e-49 MHVLIIPSWYPETPEDVDGIFFRLQAQALQRSGLKIGVTAPVFRSMRGKPASVVNGGYGI RSYTEENIPTYVYKSMYFFPRLPYLDRHRWVGAGWKLFKRYVRDHGTPDIIHAHSMNHAG ILAQQIHEKTGIPFVLTEHSSTYARKLIRNWQRPAMLQSAQQCSARIAVSKDFCRLLETE YGGPDWQYIPNSLSPAFIRPVDLANKPKNADFTFCSVAHLNYNKGFDILLPAFAEALKTH PDLKLKIGGTGLIASQLHNLAAELGLENSVEFLGGLQNDQVLDLMFRSDAFVLASRNETF GVVFIEALSQGLPVAATRCGGPQTIINENNGILVPVGDVQALAGALVSLYENRGRYDAQT LRADCLSEFGEEAVVRQITAVYKTILGGTHES >gi|289656340|gb|ADEA01000027.1| GENE 116 117277 - 118575 1604 432 aa, chain + ## HITS:1 COG:no KEGG:MS1493 NR:ns ## KEGG: MS1493 # Name: not_defined # Def: hypothetical protein # Organism: M.succiniciproducens # Pathway: not_defined # 1 413 1 410 428 165 34.0 3e-39 MKVRRLHLYTASLYIMLAAYMTAPAISYKIGLPRIDNFLTVGFILFSLMAAVTERRRYPA RAARPMLLVGLMAAWASLHLIITTLSATRFADLMFFLVLPSLMYIMYLVIRYHSDSLGFI RRFLTVFVLFVALPPFVELLTGIQLTTASGEELAIESGAVKGLFFNPNNLATAAVCLAPA VLFFFNISVEKAKDSLHGWILFALLGAAIFLSVSRTAIGCYLVLLAAYLMYRKNGPATVI TVSAAAFLLSMLPQQALQEFLLSLNNNEFLERFSSRLYLFLYDFGSDNSVSYRQEIYNYF ADNPPLLLTGYGPKNFIGYFGGHLSYDLAFENPHSFLIELYLSFGIVSLFAFAAYVYTYC NTIVLRKRLDNRAKWVSVLAMVIFIIAGFIPSSILRLPFIWLPCFMILLYSVLRPSEKIQ PAPFHAATRQIS >gi|289656340|gb|ADEA01000027.1| GENE 117 118596 - 119648 1633 350 aa, chain + ## HITS:1 COG:RP414 KEGG:ns NR:ns ## COG: RP414 COG0438 # Protein_GI_number: 15604279 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Rickettsia prowazekii # 67 313 71 302 338 72 24.0 1e-12 MSGLGGTEHATYRLGKLLCDNGHDVHLASSDGPLVEDAVKAGMTWHRIDFYDNAFTHLKG MCTFAKLLKREKPDIVHCQMARIVPACAIAAKLASSRTKVFWHSRGLVGKTYPKVVKFFT RLGVYAIANCKNERDKLLRLGFPPERTTFTYNALHKVDYVPEKTQKDYILLGTLSRLDYL RAVDQTLDVFKILIDRGLPVRLHVAGIGEDLDALKRQAERLGIADKVTFLGGVRNLTEYF KEVDILLNNPRCPGDSCAGVGNNVLEAGLYDTPVVTYNMGGIKEMVIQGETGYCFPLGAA EEFADAVEMLVKDKSLRDRIGKALHRRVAHLCSDEEIYRTTMNAYNMEAV >gi|289656340|gb|ADEA01000027.1| GENE 118 119761 - 120828 1494 355 aa, chain + ## HITS:1 COG:RC0575 KEGG:ns NR:ns ## COG: RC0575 COG0438 # Protein_GI_number: 15892498 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Rickettsia conorii # 133 330 118 311 338 84 28.0 3e-16 MKIIITTSMSGLGGTEHAAFRLGKLLNGHGHDVVLASSDGPLVADAKKIGIRWYNIDFYG GKLSYFKGMTAYVKMLKTEKPDIIHCQMARIVPACAVAAKIASPKTKVFYHARGLDPETY PKIAKLFDRLGVYIIGNCKHEREKLIRYGFPAERTAYTYNALPEQHDGPDKTPRDEVMLG TLSRLDSVRAVNLAIDFLKVLLDRGLPVRLSVAGIGEESDNLKAQAERLGLADKVIFLGG VRDLSAYFREVDILLNTPVLIGDHGAGVGNNILEAGLYETPVVTYDVAGVSEMVIDGQTG YCVPFEDKERFADAVTDLVRNPGLRRQMGKALHDHVTALCSDDEIYRATMAAYEM >gi|289656340|gb|ADEA01000027.1| GENE 119 120842 - 122014 1720 390 aa, chain + ## HITS:1 COG:NMA0640 KEGG:ns NR:ns ## COG: NMA0640 COG0438 # Protein_GI_number: 15793628 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Neisseria meningitidis Z2491 # 1 390 1 387 387 630 78.0 0 MNITIVAPYCSLPSEPHFNRFWYLAELLSQSHDVLLITSNFKHYDKSFRRPQDAETASKG RLKVMLLEESGYGKNVSLDRVKSHHVFVKNFEQWLNNCRPGEQDVVFSAYPLIATNLLLG KHKARLGYKLIIDVQDVWPESFSSVVPFLKKIPHNLLPFSSRANRAYRYADALVAVSQTY LDRAKEANPNVPSEVVYIGADFPKLDAAPAKDFGDDKTRFFYLGTLSYSYDVETVCKGIR KLLDDGENVELHIMGGGPDLDRLKQYACEGIKFYGYIPYAEMMSVAKGCDISVNAIHSYA MQSITNKLSDYMALQKPILNSQVNDEVAEVLTLLPHADYRSGDVDSFVQAAKDILARKSD PVQSDEIVRRFKRDVAYQKIVNLIERLAHE >gi|289656340|gb|ADEA01000027.1| GENE 120 122007 - 122627 821 206 aa, chain + ## HITS:1 COG:NMB1820_1 KEGG:ns NR:ns ## COG: NMB1820_1 COG2148 # Protein_GI_number: 15677656 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sugar transferases involved in lipopolysaccharide synthesis # Organism: Neisseria meningitidis MC58 # 1 198 1 198 223 354 85.0 5e-98 MSKFFKRLFDIIASASGLIILSPVFLILAYLIRKNLGAPVFFTQERPGKDGKPFKMIKFR SMRDAVDKDGNPLPDSERLTPFGKKLRAASLDELPELWNVLKGDMSLVGPRPLLMSYLPL YNDFQFRRHEMRPGVTGWAQVNGRNAISWDEKFAYDIWYIDHFSLWFDMKILFLTIKKVF IKEGISAEGEATMPYFTGNDSNEQKG >gi|289656340|gb|ADEA01000027.1| GENE 121 122611 - 123588 917 325 aa, chain + ## HITS:1 COG:CAC2189 KEGG:ns NR:ns ## COG: CAC2189 COG0458 # Protein_GI_number: 15895458 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase large subunit (split gene in MJ) # Organism: Clostridium acetobutylicum # 6 321 2 315 315 138 32.0 1e-32 MSKKGNILILSAGRRVELIQDFKTEAAKFSDGIRILTTDMNPRMSSACHVSDGAFSVPSI QSEDYIDRIFDLAAEEDIGLIIPTIDTELYKLSEARTRFEEAGIHIVISDSELVALCRDK RKTVGLFARHGIRSPEVYDRNRLVYPCFVKPYNGSRAIGARRLDRAADLTPEILADSKLM FCQLIDIAEEFQEFTVDMYYDRKGRLKCAVPRERLEVRTGEVSKGATRRNSLYGLLTENM AVLEGARGCITAQFFFNGRNDALYGVEINPRFGGGFPLTYAAGGNYPGWLIREYLYGEEI PFSDRWENNLIMLRYDAKVLVHEQD >gi|289656340|gb|ADEA01000027.1| GENE 122 123575 - 124249 682 224 aa, chain + ## HITS:1 COG:MJ1437 KEGG:ns NR:ns ## COG: MJ1437 COG1011 # Protein_GI_number: 15669628 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Methanococcus jannaschii # 11 223 5 222 228 70 30.0 3e-12 MSRINPEQSVIVFDLDDTLYAEYEYKCSGIRAVTALVAKLYPEFGETELLEKIDADGNGW LDELCALCNFNSEEKKSLLWYYRLHTPVLTPYWHPQKLAAFIRRFAAAALITDGRSLTQR LKLDALGIRCLFDEILVSESSGQEKPDGGRFYLLEKKYGMDKRYIYVGDNIKKDFVTPKK MGWLTIGLKAVPRNIHPNNPADFAEPFHPHLWIDSLPELAEIIT >gi|289656340|gb|ADEA01000027.1| GENE 123 124286 - 125071 1223 261 aa, chain + ## HITS:1 COG:lin1937 KEGG:ns NR:ns ## COG: lin1937 COG0223 # Protein_GI_number: 16801003 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA formyltransferase # Organism: Listeria innocua # 2 237 1 244 312 78 27.0 1e-14 MITKILFMGRKQISAGLLEFLSTQADIEIVGVLTDSHLQGSPTTAAAKKLGLPLYTFDTA LEAMKEGRLKYDLGLSVLYWRKLRDEFLTVPRLGTINFHPALLPEYKGTGGYNLAIMDEL SEWGSTAHYVDASIDTGEIIEVDRFPIDSSVETAQSLERKTMQALEPFAQRIIARAVEAQ AKLPTTPNIGGRYVSRDEMEAMKRIRDGDDVEKKIRAFWFPPYDGAYVEIDGQKYTLINR QLLEEVAPKDSTSLFAGKANA >gi|289656340|gb|ADEA01000027.1| GENE 124 125064 - 126239 1719 391 aa, chain + ## HITS:1 COG:NMA0638 KEGG:ns NR:ns ## COG: NMA0638 COG0399 # Protein_GI_number: 15793626 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis # Organism: Neisseria meningitidis Z2491 # 1 389 14 402 404 767 94.0 0 MLNTSLSPWPSFTQEEADAVSKVLLSNKVNYWTGTECREFEKEFAAFAGTQYAVALSNGT LALDVALKAMGIGAGDDIIVTSRTFLASASCIVTAGANPVFADVDLNSQNISAETIKAAL TPNTKAVIVVHLAGMPAEMDGIMDLAKEHDFWVIEDCAQAHGAKYKGKSVGSIGHVGAWS FCQDKIMTTGGEGGMVTTNDKELWSKMWSYKDHGKSYDAVYHREHAPGFRWLHESFGTNW RMMEMQAVIGRIQLKRMPEWTARRQAHAAKLAESLGKFASIRLIEVADYIEHAQYKFYAF VKPEHLKEGWTRDRIVNELNARKVPCYQGSCSEVYLEKAFDNTPWRPKERLKNAVELGNT SLMFLVHPTLTDGEIAFCKEHIEAVLAQATA >gi|289656340|gb|ADEA01000027.1| GENE 125 126327 - 128228 2491 633 aa, chain + ## HITS:1 COG:NMA0637 KEGG:ns NR:ns ## COG: NMA0637 COG1086 # Protein_GI_number: 15793625 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate sugar epimerases # Organism: Neisseria meningitidis Z2491 # 1 626 1 626 636 925 72.0 0 MNLDTLLSLPRNVKKTFFVIHDIVMIFVAFWFAQSLKANYSNEWSHLSNWLAFASTAGLT ISLFVRLGLYRAVTRYVSTRVLYTAVLGSAVSAVAFFISVLIFEQRLRLALPVVYFLLLV VLVTSSRIILRSVLSDHNKRPMAPVIIYGAGQSGRQLLEAIKQVNEYNAVAFVDDNPAIQ RSVIYDIAVYRPSEIADLISRYGVEKILLAIPSATMEERKAIIENLKQYNCEVLTIPGMK DLVDGKIKVSSLKKISVVDLLGRDPVAPRPELMGADITGKVVMVTGAGGSIGSELCRQIL KCRPAKLLLFELSEFSLYSIDKELRERLAEEGSSIEVLPFLGSVQNKERLLSVMKAFAVE TVYHAAAYKHVPMVEFNTVEGIRNNVFGTLLCAQAAVEAGVGTFVLISTDKAVRPTNTMG ASKRMAELCLQALAAEPGQQTRFCMVRFGNVLGSSGSVVPVFEKQIAAGGPITLTHQDIT RYFMTIPEAAQLVIQAGAMGKGGDVFVLDMGESVKIIDLAKQMINLSGLRLKDENHPDGD IEIKITGLRPGEKLYEELLIGDEVQKTTHPRIMTASEVMLPWDKLHDILSRMESACRKMN QTELRALLLEAPAGFNPKDEICDLVWQQNKKAV >gi|289656340|gb|ADEA01000027.1| GENE 126 128287 - 129420 1843 377 aa, chain + ## HITS:1 COG:ECs1139 KEGG:ns NR:ns ## COG: ECs1139 COG1596 # Protein_GI_number: 15830393 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protein involved in polysaccharide export # Organism: Escherichia coli O157:H7 # 3 375 7 370 379 322 46.0 7e-88 MQKPSLICLSLLTLLTACNSTTVIPGSTLKTRNKTVVYTGNETAADTDISKHVAIYPITP GLIARMKEPPVTAQKNDALAREKANYVYRIGSGDVLNVVVWNHNNLNSPTQQNNPQTNQV SKGVWVDERGNITYPLAGQIQAKGKTIEELQNILAGRLKRYLKNPQVAINVTEFRSQRIS VAGAVTQAGQQPITNVPLTILDAVNQAGGATAEADTQNIKWTHNGVDRTISLQKLIQYGD LTQNHMLSHGDIVYVPSNSNSKIFVMGEVGRQAALPLGSHGLTLTRALGEVGGMNQSIAD ATGVFVIRKAFDDVQKPIHVYQLNLRDATAYAMGNEFNLRANDVVYVTAAPVARWNRVVS QLTNSITNVNSLDNTFH >gi|289656340|gb|ADEA01000027.1| GENE 127 129467 - 129907 468 146 aa, chain + ## HITS:1 COG:ECs2866 KEGG:ns NR:ns ## COG: ECs2866 COG0394 # Protein_GI_number: 15832120 # Func_class: T Signal transduction mechanisms # Function: Protein-tyrosine-phosphatase # Organism: Escherichia coli O157:H7 # 1 144 1 144 147 147 50.0 6e-36 MFQNILVVCLGNICRSPTAERLLQKKLPRHQISSAGLKALTGNDADFQAIKTALKHGVIV AGHTARQLTAEMCERADLILVMEPEQIDMVADIHPPARSKTILFAQWLPKKTVPDPFNQS SEMFEAVYLQLEEAAQAWARKLNASA >gi|289656340|gb|ADEA01000027.1| GENE 128 129967 - 132147 3207 726 aa, chain + ## HITS:1 COG:wzc_1 KEGG:ns NR:ns ## COG: wzc_1 COG3206 # Protein_GI_number: 16130000 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized protein involved in exopolysaccharide biosynthesis # Organism: Escherichia coli K12 # 9 479 22 492 492 311 37.0 2e-84 MNKQATPPSPEYYSDEIDFGRQIRSLLAHKYKIALAALAGGIAGAVFSLASTPVYRADAM LEIETRQNQILTEINNIFSNESQPSEAELELVQSRMVLGKTVDDLQLDQLVEPKYFPVFG GLIHNLSGDIDPELKIADFEVSEDWINLPFELTVKNSKSYVLTLPDKRTVEGFTGKPLKI NNKTVLKVDRILADAGQKFTLTKFSKLSAIENIKKQLSVVSKGKTSPIINLSYTGTDPKE TSVILNSIADNYVGQNRERDVQVATSGLAFISEELPRMKETLQEAENKLNAYREKSGSLD IPLESKGALESLTNIESQITALRTEEAGLVEMYTPEHPTYKAVLDKLSVLERAKKKIDRQ IAELPNTQQEVIRLARDVTTNQATYVQLLNKQQELNIMKASAQGNVRIVDHAFVPELPVA PRKTLITLLSALVAGALASVWCLFRENTRQGITSSDEIEALDLEVSALVPYSKIQQKRDT LKRTLTSSNGRSSYLLANENATDTAVEAIRALRTNIYFSMLDAKNNVLMITGAAPEAGKS FISSNLATVMAQSGKKVLLIDADMRKGYLEQLFSTHVAPGLSELLSGEASPVEAVQQTDI ENLFFISHGNYTQSSSELLMNKRLGDLIEQASKRYDYVIIDTPPVLAVTDAAIVGQHVGM TLMVARYGYTTAQDLDNAARRLVQSNINIKGVILNGIKRDAFNSYNCYSYGSYTAGSDKK AAKSKG >gi|289656340|gb|ADEA01000027.1| GENE 129 132341 - 133723 2024 460 aa, chain - ## HITS:1 COG:HI1462 KEGG:ns NR:ns ## COG: HI1462 COG1538 # Protein_GI_number: 16273365 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Outer membrane protein # Organism: Haemophilus influenzae # 11 457 9 453 454 341 42.0 2e-93 MQTKPFFQTALSLSLALALSACAVHSTDKSLTLESTGQVMSAAETAERYDVNGNWWEIYQ SRQLNALMAQALENNIDLKQAAISVNKALYQANILGADLVPSFSGSLSASTSKNLKTGSH GNTFSSQLGLSYELDLWRKLSATADAQVWEYQATRQDMANTRLTLINNVADAYFNIAYLN EAIELAQKSLKQYQEIDRIADAKFRYGRADSSQPTQAKQSLLSAQNNLISLKNSLDTQKQ VLRNLLNLKPNEAIAADPAQYRLLPVKGVNLDVPITVLANRPDLRAAEYRLQSSLQSVKA QKRSWYPSITLGASLSTSSEKAKSAFNIPLLGGSATINLPFLNWQTMKWKDKTAQANFDS AKLNFEKALTTALNEVNTNYLAYQNAQAALNNQEQRYALDKKNSRYYQVRYQHGKNELKD WLEALNTEYGSAQNVLNQRYETLKYENMVYKAMAGRYTPK >gi|289656340|gb|ADEA01000027.1| GENE 130 133922 - 134227 333 101 aa, chain - ## HITS:1 COG:no KEGG:NT05HA_1168 NR:ns ## KEGG: NT05HA_1168 # Name: not_defined # Def: mitomycin resistance protein McrB # Organism: A.aphrophilus # Pathway: not_defined # 1 94 1 94 99 145 72.0 4e-34 MNPDKVQRSKLNTLTDLPNVGKAVAEDLGLLGITQPQDLAGQDAYEMYDRLCSLTATRHD PCMIDIFLSLVDFMQGNEPKPWWHFTEQRKAVLADKHSGFK >gi|289656340|gb|ADEA01000027.1| GENE 131 134441 - 134917 665 158 aa, chain - ## HITS:1 COG:no KEGG:CCC13826_0030 NR:ns ## KEGG: CCC13826_0030 # Name: not_defined # Def: hypothetical protein # Organism: C.concisus # Pathway: not_defined # 1 157 1 162 163 85 35.0 6e-16 MDVYAKYAAYPQSGIEQIKTSSGTPAAVSEYGAGKLWDALHFVLTGKGSDDADAANPLSK AIIGNILRQDEEAGEHTGWLDDTETVEVAQALNQADFAALLDGKTAADFQNNQIYPDIWG DEKAFAETRAELAQRFKELAAFYQAAAEQHCGVVVRIS >gi|289656340|gb|ADEA01000027.1| GENE 132 135124 - 137061 376 645 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 [Flavobacteriales bacterium ALC-1] # 253 642 7 410 413 149 27 8e-35 MSLIECKNINRYFGSGANRVHVLKDVSLSIEKGDFVAIIGQSGSGKSTLMNILGCLDTAT SGSYQIDGIETAKMEPDELAALRRERFGFIFQRYNLLGSLTARDNVALPAVYMGMGGKER SARAEKLLQDLGLEGKEGNKPSELSGGQQQRVSIARALMNGGEIIFADEPTGALDTASGK NVIEIIQKLHKEGHTVIMVTHDPGIAAIANRIIEIRDGEIISDTSKNPEIPESGIERIKE QTSWLFYYDQFMEAFKMSVQAIMAHKMRSLLTMLGIIIGIASVVSVVALGNGSQKKILED ISAMGTNTISIFPGSGFGDRRSGRIKTLTIADAKVIAQQSYVASATPQTTSSGTLTYRNT DLSASLYGVGEQYFDVRGLKLESGRLFDEADVKEDAQVVVIDQNTKDKLFGTDVDPLGKT VLFKKRPLTVIGVMQKEENSFGNSDVLMLWSPYTTVMHQITGESHTNSITVKIKNDANTQ VAEKGLTELLKTRHGTEDFFMNNSDSIKQVIESTTGTMKLLISSIALISLVVGGIGVMNI MLVSVTERTKEIGVRMAIGARRNNILQQFLIEAVLICIIGGLVGVGLSTAISLVFNHFVT EFPMEISVMSVIGAVVCSTAIGVAFGFMPANRASRLNPIDALAQD >gi|289656340|gb|ADEA01000027.1| GENE 133 137210 - 138394 1458 394 aa, chain - ## HITS:1 COG:NMA0728 KEGG:ns NR:ns ## COG: NMA0728 COG0845 # Protein_GI_number: 15793704 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Neisseria meningitidis Z2491 # 4 394 3 391 392 516 79.0 1e-146 MVKKIMKWVAILIAAVVAVYAVWSFFQPEEQVKYLTETVKRGNIHQTVSATGEISPSNLV TVGSQASGQIKKLYVKLGQQVKKGDLIAEINSTTQVNTLNTEKSKLETYQAKLVSAEIAL NSAEKKYKREAALWKEKATSKEDFESAQDALAAAKANVAELKASIKQTKISINTAESDLG YTRITATMDGTVVAIPVEEGQTVNAVQSTPTIIQLANLDTMLNKMQIAEGDITKVKAGQD ISFTILSEPDEPIKAKLDSVDPGLTTMSLGSYTASTDTTSNAIYYYARALVPNPDGKLSI GMTTQNTIEINGVKNVLLVPTLTIKKRDGKSYVSVLGADGKAVEREITVGLKDSMNTEVK SGLKEGEKVVMSEMSAAEQAEAAQRVMKGGGPPR >gi|289656340|gb|ADEA01000027.1| GENE 134 138721 - 139143 735 140 aa, chain + ## HITS:1 COG:NMB0547 KEGG:ns NR:ns ## COG: NMB0547 COG4968 # Protein_GI_number: 15676453 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein PilE # Organism: Neisseria meningitidis MC58 # 1 132 1 129 129 130 48.0 5e-31 MKIKQQGFTLIELMIVIVTIALLATIAYPSYAKYIRQTRLAAVRSELLQNARTLERYYTQ KRTFKDFSNDSLVQNEYFDISLTRNDAAGFELKAEPNADKNPDENCIIHLSDSGIVWATN KDGTTDDCPGYEKLTDPAQP >gi|289656340|gb|ADEA01000027.1| GENE 135 139281 - 140009 1231 242 aa, chain - ## HITS:1 COG:NMA1902 KEGG:ns NR:ns ## COG: NMA1902 COG0217 # Protein_GI_number: 15794787 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 1 241 1 241 242 441 97.0 1e-124 MAGHSKWANIQHKKARQDAKRGKIFTRLIKEITVAARMGGGDPGANPRLRLALEKAAENN MPKDNVQRAIDKGTGNLEGVEYIELRYEGYGIGGAALMVDCLTDNKTRTVADVRHAFTKN GGNLGTDGCVAFNFVHQGYLVFEPGVDEDALMEAALEAGAEDVITNDDGSIEVITAPNDW AGVKAALETAGYKSVDGDVTMRAQNETELSGEDAVKMQKLIDALEDLDDVQDVYTSAILD LA >gi|289656340|gb|ADEA01000027.1| GENE 136 140334 - 141761 855 475 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 [Haemophilus influenzae 22.4-21] # 5 457 3 445 456 333 41 2e-90 MEEMLSALVGAVNLVLWDYLLIYALLGIGLFFTIYLGAPQVTKLGAGFKSVFGGLFAKKD PADKDHKSLSQFQALAVAVSAQIGTGNVAGVATAITAGGPGAVFWMWFSAVLGMSTIFAE ALLAQKYRVVSHGKYIGGPAFYITHGLTPKIGRGAARFLSGFFSIALIIALGFIGNATQS NSIASAVTVAFDVPALAVGIGLAALAGLIIVGGVNRIANVAQFVVPFMAVIYIICAVVIL FQFSDHISPMINHIFVAAFNPEAVLGGAAGIGMREAVRFGVARGLFSNEAGMGSTPHAHA TADVNHPVQQGMAAFVGVFIDTILVCTATALIILLTDADKLGLQGAAVTQQAFVIAFGGF GSQLLAICLTFFAFTTIIGWYYFGESNIRFLFRGRHLGIYRTLVLAAIVLGTLGKVDLVW SLSDMFNGFMVIPNLIALFLLRKEIRAVYTDYLAQKKAGAGLSYQYEFHEFHDNQ >gi|289656340|gb|ADEA01000027.1| GENE 137 141933 - 143768 2881 611 aa, chain + ## HITS:1 COG:NMA0503 KEGG:ns NR:ns ## COG: NMA0503 COG0741 # Protein_GI_number: 15793502 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Neisseria meningitidis Z2491 # 26 610 33 616 616 726 67.0 0 MNIKRTLSVSLTLSAAAVLAACSSQPAQQPVTVDVSSSGIPSRKADSQSKILSDYSQYEG ALEAAKRGDDVWPQQFLAQASDSAMAENVRNEWLKNLGYRGQWALFQQEYAKLDKDGRAQ EVQCYADLNGGNYAKAADLVRETKKLPQGCTRFIESAAASGRLNGDDAWRRVRGLLGNSQ TTDARNLAAALGSPFDGGGQGAQEYSLLSVIGKDARKSPAAAAALAGMESGLSRAQSSYA WGVLGHYQALNQNMPAALGYYSRAAERGQFSDEQWEWYARAALRLQRWSDLAAIIQTMPA KLQNDPTWQYWLARSLSAQGDSTRAAALYEKAAASGRNFYALLSAEELGRSVSTRNTVGS SEKGGVKRMEKDGAINRALVLFKQSQTSGDWKMRRQAQAEWRFATRGFNEDNLLAAAQAA FNNQFYDMAINSADRTDTKLDFNLRYPAPFKETTERYATQAGIDPAWVYGLIRQESRFAM GAQSSVGAQGLMQVMPATAREIAGKIGMNSEELYTMDGNIRMGTWYMSDAKRRLQNNEVM ATAGYNAGPARARNWQAATPLEGSIYAETIPFTETRDYVKKVMTNATYYASLFNERQTSL KQRMGTVPARY >gi|289656340|gb|ADEA01000027.1| GENE 138 143979 - 144908 930 309 aa, chain + ## HITS:1 COG:no KEGG:Noca_3206 NR:ns ## KEGG: Noca_3206 # Name: not_defined # Def: putative transmembrane protein # Organism: Nocardioides_JS614 # Pathway: not_defined # 30 309 43 323 330 201 41.0 3e-50 MNMKRSILLPLLLAFSGAALAQPAELSTPIRGITLESTDNLDMTLKLIKSSRKRLTVRLV MDDDDISAYKKVVDALAPHANVMVQILDSEQMPNYSVEKIRRRTTRAMNAFGDKVALWEI GNELNGNWVGSSPQEINAKAQAAYEVVKKRNGKTALTLNYWSSPNCYEKDWEATSKYAES LPASLRNVDYAFLSIYETVCTPAQHPSSNDLARTFNHFKGQFSKATKFGIGEIGTQDESD EQKPATLEEKKRIANYYYGLQQPLYAKMGDRYVGGYFWWYFHRDATLPEVNGGRKDNLWP TLKGLLEQL >gi|289656340|gb|ADEA01000027.1| GENE 139 145000 - 147603 3759 867 aa, chain - ## HITS:1 COG:NMB1416 KEGG:ns NR:ns ## COG: NMB1416 COG0308 # Protein_GI_number: 15677275 # Func_class: E Amino acid transport and metabolism # Function: Aminopeptidase N # Organism: Neisseria meningitidis MC58 # 1 867 1 867 867 1706 97.0 0 MSKTVRYLKDYQTPAYRILETDLHFDIAEPQTVVKSRLTVEPQRVGEPLVLDGSAKLLSV KINGAAADYVLEGETLTIAGVPSERFAVEVETEILPAENKSLMGLYASGGNLFTQCEPEG FRKITFYIDRPDVMSKFTTTIVADKKRYPVLLSNGNKIDGGEFSDDRHWVKWEDPFAKPG YLFALVAGDLTVTEDRFTTMSGRNVKIEFYTTEADKPKVGFAVESLKNAMKWDETRFGLE YDLDIFMVVAVGDFNMGAMENKGLNIFNTKFVLADSRTATDTDFEGIESVVGHEYFHNWT GNRVTCRDWFQLSLKEGLTVFRDQEFSGDRASRAVRRIENIRLLRQHQFPEDAGPTAHPV RPASYEEMNNFYTMTVYEKGAEVVRMYHTLLGEEGFQKGMKLYFQRHDGQAVTCDDFRAA MADANGINLDQFALWYSQAGTPVLEAEGRLKNNVFELTIKQTVPPTPDMADKQPMMIPVK IGLLNRNGEAVAFDYQGKRATEAVLLLTEAEQTFLLEGVTEAVVPSLLRGFSAPVHLSYP YSDDDLLLLLAHDSDAFTRWEAAQTLYRRAVAANLAALSDGVELPKHEKLLAAVEKVISD DLLDNAFKALLLGVPSEAELWDGAENIDPLRYHQAREALLDTLAVRFLPKWHELNRQAAK QEHQSYEYSPEAAGWRTLRNVCRAFVLRADPAHIETVAEKYGEMAQNMTHEWGILSAVNG NESDTRNRLLAQFADKFSDDALVMDKYFALIGSSRRSDTLQQVQTALQHPKFSLENPNKA RSLIGSFSRNVPHFHAEDGSGYRFIADKVIEIDRFNPQVAARLVQAFNLCNKLEPHRKNL VEQELQRIRAQEGLSKDVGEIVGKILD >gi|289656340|gb|ADEA01000027.1| GENE 140 147870 - 148019 96 49 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298369968|ref|ZP_06981284.1| ## NR: gi|298369968|ref|ZP_06981284.1| hypothetical protein HMPREF9016_01302 [Neisseria sp. oral taxon 014 str. F0314] # 1 49 1 49 49 80 100.0 2e-14 MVPPVKSIDFFRIKNSPSGLFNPAGAFSANPFRRDAPMQTATLFLTYQK >gi|289656340|gb|ADEA01000027.1| GENE 141 148029 - 149372 1791 447 aa, chain + ## HITS:1 COG:NMA0752 KEGG:ns NR:ns ## COG: NMA0752 COG1726 # Protein_GI_number: 15793727 # Func_class: C Energy production and conversion # Function: Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA # Organism: Neisseria meningitidis Z2491 # 1 447 1 447 447 875 96.0 0 MIKIKKGLDLPIAGRPEQAVYDGPAITEVALLGEEYAGMRPSMKVKEGDAVKKGQVLFED KKNPGVVFTAPASGKISAIHRGEKRVLQSVVIAVEGDDEIEFERYAPDALANLSGEEVRR NLIQSGLWTALRTRPFSKIPAVDAEPFAIFVNAMDTNPLAADPVVVIKEAAEDFRRGLLV LSRLTERKIHVCKAAGADVPSENAANIETHEFGGPHPAGLSGTHIHFIEPVGANKTVWTI NYQDVIAIGRLFVTGRLNAERVVALGGPQVNKPRLLRTVLGAKVSQLTAGELVDADNRVI SGSVLNGAIAQGAHDYLGRYHNQISVIEEGRSKELFGWVAPQPDKYSITRTTLGHFLKNK LFKFTTAVNGGDRAMVPIGTYERVMPLDILPTLLLRDLIVGDTDSAQALGCLELDEEDLA LCSFVCPGKYEYGPLLRKVLETIEKEG >gi|289656340|gb|ADEA01000027.1| GENE 142 149375 - 150607 1907 410 aa, chain + ## HITS:1 COG:NMA0751 KEGG:ns NR:ns ## COG: NMA0751 COG1805 # Protein_GI_number: 15793726 # Func_class: C Energy production and conversion # Function: Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB # Organism: Neisseria meningitidis Z2491 # 1 410 1 410 410 733 96.0 0 MGLKHFLEKIEPHFLPGGKHEKWYALYEAAATIFYTSGAVTRKAAHVRDALDSKRMMILV WLALFPAMFYGMYNVGAQAFGALTPDLLQQSIANDWHYALANALGINMSSEAGALGKMLF GAIYFLPIYATVFIVGGFWEVLFATVRKHEINEGFFVTSILFALIVPPTLPLWQAALGIT FGVVVAKEVFGGTGKNFMNPALAGRAFLFFAYPANITGDTVWTAVDGYSGATALAQWAAH GSEGLKNAVTNQSITWMDAFIGNVPGSIGEVSTLALLIGGAFIVFARIASWRIIAGVMIG MIAMSSLFNVIGSDTNPMFSMPWYWHLVVGGFAIGMLFMATDPVSASFTNVGKWWYGALI GVMCVLIRVVNPAYPEGMMLAILFANLFAPIFDYFVAQANIKRRKARSNG >gi|289656340|gb|ADEA01000027.1| GENE 143 150600 - 151376 1308 258 aa, chain + ## HITS:1 COG:NMA0750 KEGG:ns NR:ns ## COG: NMA0750 COG2869 # Protein_GI_number: 15793725 # Func_class: C Energy production and conversion # Function: Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC # Organism: Neisseria meningitidis Z2491 # 1 258 1 258 258 460 92.0 1e-130 MAKKFDKDSFSGTLIVVLAVSLICSVIVAGAVVGLKPVQEKQKVQDKQSYILSVAGLLDK NTDISKTFADRIEQRVVDLATGEYVKDAPKDFSARVAAKDPAQSIQIKPEDDLAGIKSRA KYTEVYLVKGDDGKVSQIILPMHGNGLWSVMYGFVAIQPDGNTINGITYYDQGETPGLGG EIGNPLWQQKFVGKKLFDEQGKLALHVSKGGSLDKEHGVDALSGASLTSKGVQGSFAYWF GENGYIPYLNKLKSAGAQ >gi|289656340|gb|ADEA01000027.1| GENE 144 151376 - 152002 872 208 aa, chain + ## HITS:1 COG:NMA0749 KEGG:ns NR:ns ## COG: NMA0749 COG1347 # Protein_GI_number: 15793724 # Func_class: C Energy production and conversion # Function: Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD # Organism: Neisseria meningitidis Z2491 # 1 208 1 208 208 375 94.0 1e-104 MADMKRLKHLMFSPFIDNNPIALQVLGICSALAVTTKLQTAIVMGISVSLVTGFSSFFIS LVRNYIPNSIRIIVQMAIVASLVTLVDQLLQAYAYELSKQLSVFVGLIITNCIVMGRAEA FAMKEPPLESLVDGIGNGAGYGMMLIIIASIRELIGSGKLFGYTIFQTVQDGGWYQTNGL FLLAPSAFFIIGFLIWGLRTWKPEQAEE >gi|289656340|gb|ADEA01000027.1| GENE 145 152006 - 152599 1037 197 aa, chain + ## HITS:1 COG:NMB0565 KEGG:ns NR:ns ## COG: NMB0565 COG2209 # Protein_GI_number: 15676470 # Func_class: C Energy production and conversion # Function: Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE # Organism: Neisseria meningitidis MC58 # 1 197 1 197 197 305 96.0 3e-83 MEHYLSLFVKSVFIENMALSFFLGMCTFLAVSKKVSTAFGLGVAVTFVLGLSVPANQLVY SLLKDGAIVEGVDLTFLKFITFIGVIAALVQILEMFLDKFFPALYNALGIYLPLITVNCA IFGAVSFMAQREYNFGESVVYGFGAGLGWMLAIVALAGITEKMKYSDAPKGLKGLGITFI SAGLMAMAFMSFSGIQL >gi|289656340|gb|ADEA01000027.1| GENE 146 152613 - 153830 1787 405 aa, chain + ## HITS:1 COG:NMB0564 KEGG:ns NR:ns ## COG: NMB0564 COG2871 # Protein_GI_number: 15676469 # Func_class: C Energy production and conversion # Function: Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF # Organism: Neisseria meningitidis MC58 # 1 405 1 405 405 786 98.0 0 MEIILGIVMFTVIVLALALMILFAKSKLVSEGDITIKVNDEKELTMPAGGKLLGALASQG IFVPSACGGGGSCGQCRVVVKSGGGDILPTELSHISKREAREGCRLSCQVNVKTDMDIEV PEEVFGVKKWECTVISNDNKATFIKELKLAIPEGEEVPFRAGGYIQIEAPPHTVAYKDFD IPKEYHEDWDKYNLWQYVSKVDEPILRAYSMASYPEEKGIIMLNVRIATPPPRVPDAPPG QMSSYIWSLKPGDKVTISGPFGEFFAKDTDAEMVFIGGGAGMAPMRSHIFDQLKRLNSKR KITFWYGARSKREMFYVEDFDQLAAEFPNFTWHVALSDPLPEDNWDGYTGFIHNVVYENH LKNHEAPEDCEFYMCGPPIMNQSVIKMLKDLGVEDENILLDDFGG >gi|289656340|gb|ADEA01000027.1| GENE 147 154021 - 154512 591 163 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298369975|ref|ZP_06981291.1| ## NR: gi|298369975|ref|ZP_06981291.1| periplasmic protein [Neisseria sp. oral taxon 014 str. F0314] # 1 163 1 163 163 298 100.0 5e-80 MKYTVLSSALSLLITACSVGTPGMSVGLGVGTGIGRHVGLGTSINFPVRLDKNKDGISSD NGGIKVIEEQIITYFDTHGNTSNGMVKGGYYRQLINKRGGDYIVQDFYSDNGQKRTDPYT LGRNQLMLFRAIPDNGSLTTYAYNGNVMQQQVFKNGKLISAKY >gi|289656340|gb|ADEA01000027.1| GENE 148 154966 - 156087 1531 373 aa, chain - ## HITS:1 COG:NMA0831 KEGG:ns NR:ns ## COG: NMA0831 COG0687 # Protein_GI_number: 15793802 # Func_class: E Amino acid transport and metabolism # Function: Spermidine/putrescine-binding periplasmic protein # Organism: Neisseria meningitidis Z2491 # 1 373 1 379 379 557 74.0 1e-159 MKKSLFASLLACLMLAACGGAERSNGTSVAPSDKLNIFNWSDYVDPDTVVAFAKSRHINI RYDYYDSNESLEAKILTGKSGYDLVAPSIVNVGRQIKAGAYREIDKQQIPNYRNINPDLL AMMNKVDPGNKYAVPYFWGINTLAINKNMVAKALGSDKLPENEWDLVFNPEYTRKLKSCG ISYFDSAIEQIPLALNYLGKDPNSEDTEDIKAAVALMKKVRPDIKRFTSSGYIDDMAAGN LCVAIGYGGDLNIAKNRAAEAKNGVDIQVLVPLNGVGIWVDSFMIPRDAENVGNALAYIN YTLEPEVAAKNGSYVTYAPASQPARKLMDAKYADDASIFPSKEIMEKSFIVSPKSSVASK LSVRLWQGLKAGR >gi|289656340|gb|ADEA01000027.1| GENE 149 156437 - 156961 831 174 aa, chain + ## HITS:1 COG:NMB1683 KEGG:ns NR:ns ## COG: NMB1683 COG0494 # Protein_GI_number: 15677531 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Neisseria meningitidis MC58 # 1 174 1 174 174 312 92.0 2e-85 MLDREGYRPNVGIILINNRNEVFWGKRVREHSWQFPQGGIKPGESPETAMYRELYEEVGL LPQHIKIVGRTRDWLRYDVPSHWVRREWRGSYRGQKQIWYLLRLVGRDSDINLRACHHPE FDGWRWHQYWAPVDEVIDFKRDVYLGALKELSSRFLRGMESYEDFTARLPFDNR >gi|289656340|gb|ADEA01000027.1| GENE 150 157031 - 159016 3457 661 aa, chain + ## HITS:1 COG:NMB1682 KEGG:ns NR:ns ## COG: NMB1682 COG0187 # Protein_GI_number: 15677530 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Neisseria meningitidis MC58 # 1 661 1 661 661 1315 98.0 0 MTKNNQYSESSITVLKGLEPVKERPGMYTRTDSPTHICQEVIDNAADEALGGFATEIDVR IHNDGSLSVHDNGRGIPVGLHPVEGVPVVELVFTRLHAGGKFNKKDGGSAYAFSGGLHGV GVSVTNALSTRLEVTVKREGKIHRIVFAGGDVVEPLAEVGKCAVKDSGTEVRVWPDGKYF ESPNYSIPELERLLRAKAVLLPGVRVSLTRPVKGEDEAHTQTWHYPDGLKSYLTDLIADA QEAVPLFSCENYISDDHNGDFSIGEGAAFALTWLEEGSCANESYVNLIPTPLGGTHEAGL KQAVFNAVNNFINLHNLLPRGVKVQSDDVFSKTAFVLSARVLDPQFQGQTKDKLTNRDAL KLVAAVSGDPLELWLNQNVDFGKKIAELAIRQAQARMRSVKKIEKKKGSGVAVLPGKLTD CESEDIRENELFLVEGDSAGGSAKLARDKATQAILPLRGKVLNSFEVHPDQLFGNAEIHD ISVAIGVDPHGINDHPDLSGLRYGKIAILSDADVDGSHIQVLLLTLFYRHFPKLVADGHI YVAQPPLFRVDVNAQGKSKPARKFYALDQNELDSILERLQKEGVKETAYSISRFKGLGEM NPDQLKDTTMHPDTRRLLQVQIPKGADDETRDIFVKLMGKGEAAARRAWMEREGDTAELD I >gi|289656340|gb|ADEA01000027.1| GENE 151 159337 - 159861 739 174 aa, chain + ## HITS:1 COG:NMA0343 KEGG:ns NR:ns ## COG: NMA0343 COG3038 # Protein_GI_number: 15793353 # Func_class: C Energy production and conversion # Function: Cytochrome B561 # Organism: Neisseria meningitidis Z2491 # 44 174 2 132 134 167 70.0 1e-41 MKPDSSQYYGTVSRLLHWLMVVGFAGILITIALWTIYDGEEWAGALFGIHKSIGFVLLVL IVLRLLWAVMNARKRPPADSVAAKLGHLALYALMLAIPVIGMIRQYGNGRGPLKVFGIQV MQGSPEKIEWMANLGNMVHGNLGWLMFALAAGHIVMVAVHRAQGRDVLSRMLGR >gi|289656340|gb|ADEA01000027.1| GENE 152 159930 - 160298 419 122 aa, chain - ## HITS:1 COG:mll5649 KEGG:ns NR:ns ## COG: mll5649 COG2967 # Protein_GI_number: 13474703 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein affecting Mg2+/Co2+ transport # Organism: Mesorhizobium loti # 4 111 9 116 130 96 44.0 1e-20 MNEIEINVKPRYVAGQSDVYRDRYAFNYLITICNRSENIVTLRQRFWEITDGHGETEQVG NSGLVEEQPVLYPGEEYEYNSGSQLSTPWGSIEGAYEFEDSIGERFIVGVPKLEFKAGFT LQ >gi|289656340|gb|ADEA01000027.1| GENE 153 160419 - 160907 430 162 aa, chain - ## HITS:1 COG:NMA2102 KEGG:ns NR:ns ## COG: NMA2102 COG1267 # Protein_GI_number: 15794977 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylglycerophosphatase A and related proteins # Organism: Neisseria meningitidis Z2491 # 1 159 1 159 161 195 73.0 2e-50 MAEFKPDFAWLKQRPLCFLAFGFGSGLAPVAPGTFGTLPALPIAFVLYLLGVTGWWLAVL CVVLFFWGVRICSHTERELGIQDYGGIVWDEIVAMLLVLAFVPFRWKWWLAALVLFRVFD AVKPWPIKWFDARIHGGLGIMLDDIIAAFFTLFVLNAVMWIG >gi|289656340|gb|ADEA01000027.1| GENE 154 160900 - 161859 381 319 aa, chain - ## HITS:1 COG:NMA2103 KEGG:ns NR:ns ## COG: NMA2103 COG0611 # Protein_GI_number: 15794978 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate kinase # Organism: Neisseria meningitidis Z2491 # 1 319 1 318 318 444 69.0 1e-125 MTEFDFIRRYLKKQQDDAQVVLGIGDDAAIIRPQVGFDLCFSSDMLLKGRHFFADVQPDD LAWKVLAVNISDMAAMGATPRWVLLSVGLPELDESWLHRFCNNLFDLAQRFGVTLIGGDT TRGDLVFNVTIIGELPTGKALRRDAAKEGDDIWVSGQIGLAAAGLNHCLGKCVLTERIAE KCKKALLRPMPRVKLGQNLLSIAHAAQDVSDGLAQDIGHILKASAVGAELWVDSLPSLSE LKQSLSRQQWLEYTLSGGDDYELVFTAPASCRKAVIMAGKESGTAVTRIGRITDTGRLKI ISSGGDEVKLTTQGFDHFG >gi|289656340|gb|ADEA01000027.1| GENE 155 162119 - 162862 914 247 aa, chain - ## HITS:1 COG:NMB0382 KEGG:ns NR:ns ## COG: NMB0382 COG2885 # Protein_GI_number: 15676296 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein and related peptidoglycan-associated (lipo)proteins # Organism: Neisseria meningitidis MC58 # 1 221 1 237 242 298 70.0 7e-81 MTKQLKLSALFVALVASGTAMASEAHTKHGYVVSSQSQEVVRNNYGECWKSTYFDKETQG RIECGDAVAVEQAPEYAEETVSLSAKTLFGFDKDILRPEAKESLNALAQRLSNSNVESVR VEGHTDFMGSEQYNQALSERRANVVANYLVNQGVASNKISAVGLGESQAQMTGTCEAEVA NLGKKVSKAKRRAALIACIEPDRRVDVKIRSIITKQVAPGQVQGERPATDEGWIPSPYNG VHGYAKP >gi|289656340|gb|ADEA01000027.1| GENE 156 163113 - 163298 119 61 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLSLYKNNNKYNKLNLIFIIKKDSSRKNKNFFSIKAFAGKLVQNMLNYTLLSYKTYKRKL L >gi|289656340|gb|ADEA01000027.1| GENE 157 163295 - 164245 1039 316 aa, chain + ## HITS:1 COG:NMB0381 KEGG:ns NR:ns ## COG: NMB0381 COG0583 # Protein_GI_number: 15676295 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Neisseria meningitidis MC58 # 1 316 1 316 316 539 81.0 1e-153 MKLQQLRYALEVFRHNLNVSEAADALFTSQPGISKQIRLLEEELGVQIFIRSGKRVVSVS QPGKAVLELSERILRDVQNIKNIGSEFTDHDSGSLTIATTHTQARYALPEIVAQFVRNYP KVQLTIKQGSPSAIAQMVSGGEADIGIITEAIDDHPELCKLPCYEWNHAVIVPQDHPLLD CRHPLSLKDLASFPLVTYEFAFNNGSSIARAFTRARLEQPDVALSAADTDVLKTYVKLGL GVGVMAKMAYNPQTDQDLQLIDAAHLFEPSPTWIALRPDTYLRGYTYDFINLFAPKLNRE AVDRILYSPIVEDYSI >gi|289656340|gb|ADEA01000027.1| GENE 158 164330 - 165064 653 244 aa, chain - ## HITS:1 COG:NMA2107 KEGG:ns NR:ns ## COG: NMA2107 COG0664 # Protein_GI_number: 15794981 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Neisseria meningitidis Z2491 # 1 244 1 244 244 433 88.0 1e-121 MTTHNASHQVKTLCSTCSLRELCLPVGLMPNEFSQLDAVIRQSRRLKKGEFLFRAGEPFT SLFAIRAGFFKTTVASQDGRDQVTGFFMSGELIGMDGICSHTHSCDAVALEDSEVCELPF GHIEELGQNIPSLQTHFFRLLSREIVRDQGVMLLLGNMRAEERLAAFLLNLSNRLYSRGF AANDFILRMSREEIGSYLGLKLETVSRTLSKFHHDGLIKVEHKHIKILEPQALKKMVSGC THAM >gi|289656340|gb|ADEA01000027.1| GENE 159 165216 - 166622 2093 468 aa, chain + ## HITS:1 COG:NMA2108 KEGG:ns NR:ns ## COG: NMA2108 COG0635 # Protein_GI_number: 15794982 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Neisseria meningitidis Z2491 # 1 468 1 473 473 874 89.0 0 MKIISIKNNEEPEFDRQLIASLPATGPRYTSYPTADRFHDGFRETEYVKALELRGIGALN KPLSLYIHIPFCNTICYYCGCNKIITKDKSRADAYIEYLEKEMELLAPHLGGRHRLAQLH FGGGTPTFLSDDQLERIFHMIRKHFQLIPDGEYSIEIDPRKVSRDTVLMLGKLGFNRMSV GIQDFDSKVQAAVNRIQSYEETKEVIDAAREAGFKSVSVDLIYGLPHQTAESIKTTIDTV LSLDPDRLALYHYAHLPHIFKPQRRIDTDAVPGSEEKLDMLQYCVQTLTRRGYVFIGMDH FAKPDDELSVALREGLLQRNFQGYSTYADCDLVAIGVSSIGKIGSTYSQNERNIDDYYAA IDAGHLPVMRGYQLNQDDLLRRTVIQDLMCRFALDYRAYESVFGIPFGHYFKEELADLQQ LAELGLVRLSSHGLKVTPKGRFLIRNIAMVFDYHLRHKETKAKYSQTV >gi|289656340|gb|ADEA01000027.1| GENE 160 166762 - 167013 315 83 aa, chain + ## HITS:1 COG:YPO2376 KEGG:ns NR:ns ## COG: YPO2376 COG3313 # Protein_GI_number: 16122599 # Func_class: R General function prediction only # Function: Predicted Fe-S protein # Organism: Yersinia pestis # 2 81 45 120 121 76 42.0 1e-14 MEQPDFFNIPSPCIGVCEANAKGYCKGCLRSREERLYWLDMTDEQKHQVMRLIGMRKTKI RNRKLELLERPDNAAPEQGSFDF >gi|289656340|gb|ADEA01000027.1| GENE 161 167051 - 170263 4096 1070 aa, chain - ## HITS:1 COG:NMA1974 KEGG:ns NR:ns ## COG: NMA1974 COG1330 # Protein_GI_number: 15794857 # Func_class: L Replication, recombination and repair # Function: Exonuclease V gamma subunit # Organism: Neisseria meningitidis Z2491 # 1 1069 1 1069 1069 1546 72.0 0 MFYLYQSNRLESLAALFAGIQRVRPLESALVAEQIVVQSQGMRRYLSVYLARELGVAANL QFSLPAGLTWQLMQKLIPDIPALSPFSPEVMRWRLLDLFRSERFQTASEFENVRSVLQSY LGSGDSADYQLAGQLADIFDQYLVYRPQWIDAWQEGKLLGLGEDEVWQAQLWRYLDDGNQ SAPHRVALWEKLLSSLDKAHLPERFFVFGISTMAPMYLQLLQKISEHCDVFVFALNPSGQ YWGNVIEAAQLLKGGDEADLSQTGHPLLASLGKQGRDFFDFLTEIGLEEQPVFEEVSDDT LLHCLQNDIQNLRMPSEHSRTDLLGDGSVRIVSAHSPLRELQILKDKLLRILHEHPDWQP HDIAVLTPNIEPYSPFIEAVFGQAQGGAQALPYSVSDVKLSRRQPLLYALEQTLDLLESR FEVDKVLPLLESGLVLRRFGLTADDLPLLHDTVAELNVHWGLDGTMRGAADNLFTWQQAL ERIVLGWMLPDDGSPLWQNVSAWHGDVNRLDVFGRFVAFIRTLSRLAAEWRKPAAAEEWT ERCRDLVQSLFLPDADDQYALQQFEQALAKWQEETALAGFSGTLPQHTVIRHIRRFLGSE SQAGFLRGGITFCSMVPMRSLPFKVICLLGLNDGDFPRNTKAAVFDLIAKHPQKGDRARR DDDRYLFLEAIISARNILYLSYVGRSIRNDDELAPSALVSELIDTVAAMTGRRSKELAEH WVEQHPLQPFSHRYFIADNISDDLFSTRQDYADALNRPREQARPFFSEALEENSPAPTVW QDDFIRFWKNPVKAWLQQTLGWREPYRDEAWESAEPFEPQRADKIAAAYLDARRHNQDFQ ETAVRLDAESLLPAGELGKLWQQNFQAAAKRIDGALLQSPKLPPFAYEIQFDGQTLQGSL GNLYQCGQVFYLDRKPNAPQRIALLLEHLIFCVVGSSETETRQTHIVQPEETTLYPEIPS SQAQQMLQKWLTFFNLGQTRPLPFFAKTSLAAAEAYGKKQSWEGALNKARTEYHGNKVSK GQKDYTEVELVFGDEDTGPIEGVLFRRLTEELLVPLLDAVENSQSVEKAV >gi|289656340|gb|ADEA01000027.1| GENE 162 170579 - 171985 1746 468 aa, chain + ## HITS:1 COG:NMA1975 KEGG:ns NR:ns ## COG: NMA1975 COG3182 # Protein_GI_number: 15794858 # Func_class: S Function unknown # Function: Uncharacterized iron-regulated membrane protein # Organism: Neisseria meningitidis Z2491 # 6 468 7 469 469 798 85.0 0 MDPKTTTSDQQANRRYLTVWRWHFYFGLLVAPFLTLLAVTGLGMLLFANITGKEGERIHV TPQAQVQPLSAQAEAARQSVNPETASVVQYIAPRADDMVAVFRVNNDDKATMVAVDPYTA KVVSSMPRNEGWYHTMDEIHGDMMLGTAGDYLIETAASLTILMMITGIYLWWAKQRSLKP MLVPQTGKGRTWWRSMHGAFGTWVSLILLLFCLSGVAWAGIWGGKFVQSWSQFPAGKWGV EPNPVSVVPTHGDVLNDGKTKEVPWILELTPMPVSGTTKGENGINPSEPMTLETVDRFAR EIGFKGRYQLNLPKGETGVWTLSQDSMSYDMVSPTADRTVHIDQYSGKILADIRFDDYNF FGKFMAASIALHMGTLGWWSVLANVLFCLAVIFICVSGCVMWWKRRPSKAGGLVPPAQKI ELPVWWAMAVPLLIVAVLFPTAIAAIAVIWLLDTALLSRIPALEKWFK >gi|289656340|gb|ADEA01000027.1| GENE 163 172074 - 172664 816 196 aa, chain + ## HITS:1 COG:PA3885 KEGG:ns NR:ns ## COG: PA3885 COG2365 # Protein_GI_number: 15599080 # Func_class: T Signal transduction mechanisms # Function: Protein tyrosine/serine phosphatase # Organism: Pseudomonas aeruginosa # 22 164 29 168 218 94 33.0 1e-19 MRAVLTLLLLALPLSAFAADPASVPSEKRSRWATSVKQDANLYRIDDKLYRSEQPVADDG DTIEKLGIKSVINLRYFDRNNNDSHLKNRGLTLLNRPLRSWRIKPEDIAQTLYLIEKQQQ QGAVLIHCYHGADRTGLISGMYRIIYQGWTVADAKEEMLHGPYGYHSIWKNIANLFTEKT VKQVRQHLAELRRGRK >gi|289656340|gb|ADEA01000027.1| GENE 164 172755 - 173255 707 166 aa, chain - ## HITS:1 COG:BS_ywnH KEGG:ns NR:ns ## COG: BS_ywnH COG1247 # Protein_GI_number: 16080709 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase and related acyltransferases # Organism: Bacillus subtilis # 4 164 2 162 163 160 47.0 9e-40 MQYTVSQAVRQDLPAIVAIYNSAVETRQSTADLAPVGTQDRQAWFETHTGDRPLYVLKNQ TGEVLAWGSFSDYYPRRAYHISAEISIYVRHDMRGAGMGKILLRNMLERAPSLGIRNVLA VIFGHNHVSLRLFHSMGFQEWGRLPQVCDLETFAADVVILGKKILD >gi|289656340|gb|ADEA01000027.1| GENE 165 173459 - 173662 227 67 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298369992|ref|ZP_06981308.1| ## NR: gi|298369992|ref|ZP_06981308.1| hypothetical protein HMPREF9016_01326 [Neisseria sp. oral taxon 014 str. F0314] # 1 67 1 67 67 85 100.0 1e-15 MPHSVLHGILSSCMYLFIALCAAALARWFYLLATVGFSWDASAVYAKAFLVFLVLSIFSY KVVSTLS >gi|289656340|gb|ADEA01000027.1| GENE 166 173626 - 173883 122 85 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNSKYRVIPNAASSTPFFPNDPSRQLSAVDHVRIQAARLFKTLFKVSGHSTNQYQTLEIQ ALDVFWDYRSVVWFACLPLFSEKAF >gi|289656340|gb|ADEA01000027.1| GENE 167 174228 - 175889 2226 553 aa, chain - ## HITS:1 COG:NMA0766 KEGG:ns NR:ns ## COG: NMA0766 COG0644 # Protein_GI_number: 15793741 # Func_class: C Energy production and conversion # Function: Dehydrogenases (flavoproteins) # Organism: Neisseria meningitidis Z2491 # 1 553 33 585 585 1132 96.0 0 MTETIERDSMQYEVVIVGAGPSGLSAAIKLKQLAEKNGREISVCVVEKGSEAGAHSLAGA VIDPIALNELIPDWKEKGAPLTCAVTQDKVLFLTEKKAFNLPVTPNFDNHGNYIVSLGEV VRWLAEQAENMGVEIYPGFAAAEVLYHEDGSVKGIATGNMGIGKDGEPTDSFQPGMELWA QQTLFAEGCRGSLSKQVIERFQLDQNSQPQTYGLGIKEIWEVSSEKHQPGLVVHSAGWPL DSKTYGGAFVYHFDDNKVAVGFVVGLDYQNPYLSPFEEFQRFKTHPEIRKTFEGGRRIAY GARSLIEGGLQSLPKLSFKGGVLIGDAAGFLNMPRIKGIHTAMKSAMLAAEAVFPLLENL EEVEGFDSGKEAADYQQRFEQSWLYQELYAARNVRPSFKWGVYLGSIYTGIDQMIFRGKA PWTLKHHGKDNEQLKKAAACKPIDYPKPDGVLTFDRLSSVFLANLAHEENQPDHLVLNNP QTMIDVNYKEYASPETRYCPAGVYEIVEEKGSPRLQINAANCVHCKTCDIKDPTQNITWI CPEGASGPNYGGM >gi|289656340|gb|ADEA01000027.1| GENE 168 176133 - 176507 252 124 aa, chain - ## HITS:1 COG:no KEGG:NMCC_0818 NR:ns ## KEGG: NMCC_0818 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_053442 # Pathway: not_defined # 1 124 1 125 139 156 57.0 2e-37 MSFAYLIAASRPCPMLAKMRGEAFALVAQDTDLWVYFRFCEGSVYTERSETESCMTEKGA EWLRWIYGLCGGSFVFSDVLLRHREGEEDFAKLVLKHIKENKVSVAQISAGLRLDLRCFY RMEM >gi|289656340|gb|ADEA01000027.1| GENE 169 176524 - 176952 410 142 aa, chain - ## HITS:1 COG:no KEGG:NMA1082 NR:ns ## KEGG: NMA1082 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_A # Pathway: not_defined # 21 142 2 122 123 105 46.0 7e-22 MFFQIVCESDNPYIHLLKQRRFYVEKADTAYTFFRKVWNRDDDFLSKAYISLEGWITEKS NPKLFKQYLKLELRNKCPCESVFCLSEDMRDVIVSMSENLRYVEFACSEDFGDLPEVGIG RGVLSDAPFFCVGFGQKYILNK >gi|289656340|gb|ADEA01000027.1| GENE 170 177217 - 178125 1564 302 aa, chain - ## HITS:1 COG:NMB0586 KEGG:ns NR:ns ## COG: NMB0586 COG0803 # Protein_GI_number: 15676491 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Neisseria meningitidis MC58 # 1 302 1 304 304 451 85.0 1e-126 MKHWKFGAIAALLTGAVYAAPLPVVTSFSILGDVAKQIGGERVAVQSLVGANQDTHAYHM TSGDIKKIRDAKLVLLNGLGLEAADVQRAVKQSKVPFAEATKGIQALKAEEGDHHHHDHS HEGHHHDHGEFDPHVWNDPVLMTTYAQNVANALIQADPEGKTYYQQRLGNYQVQLKKLHS DAQTAFNAVPAAKRKVLTGHDAFSYMGKRYNIEFIAPQGVSSEAEPSAKQVASIIRQIKR EGIKAVFTENIKDTRMVDRIAKETGVNVSGKLYSDALGGAPADSYIGMYRYNVKALTDAM KK >gi|289656340|gb|ADEA01000027.1| GENE 171 178244 - 178996 877 250 aa, chain - ## HITS:1 COG:NMA2038 KEGG:ns NR:ns ## COG: NMA2038 COG1381 # Protein_GI_number: 15794918 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Neisseria meningitidis Z2491 # 1 240 2 243 264 315 66.0 7e-86 MSDHRINHEPAFLLASVPWRESSLRLEVFSRSYGRVALLARSARKRQSELRGVLVPFVPM SASWYGSGELKTLHRAEWLGGWPQPQGRALFSGLYVNELVLRLTAREDPQPELYDALQDV LQTLCRQPNHAGALRRFEWKLLDSLGYAPDLQRDGNGDPVDAGRRYLVRPEEAVMPLEQD DVRTAAEVAVDGGTLLQLRQGKFDSGEGLQQALQITRLLLDFRLPDGIRSRQVLQQLQRF QGTMPGGGAD >gi|289656340|gb|ADEA01000027.1| GENE 172 179168 - 180199 1157 343 aa, chain - ## HITS:1 COG:NMB1859 KEGG:ns NR:ns ## COG: NMB1859 COG0809 # Protein_GI_number: 15677694 # Func_class: J Translation, ribosomal structure and biogenesis # Function: S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) # Organism: Neisseria meningitidis MC58 # 1 340 1 340 346 573 84.0 1e-163 MDISDFDFDLPQALIAQHPPKVRGGSRLLAALPDMPLQDAAFSDLPDYIGAGDVLVFNNT KVMKARLFGQKESGGKIEALIERVLDGHTALAHIRSSKSPKAGTVLIFEGGIRAVMIERA GDLFCLRFDCGQTVYELLEQNGRLPLPPYIERAADDDDDSRYQTVYAKYQGAVAAPTAGL HFTDELLGRLKAKGVETAEVTLHVGAGTFQPVRVSNIADHKMHSEWFDVPPETVAAIEAA QARGGRVWAVGTTSMRALESAARETGRLKAGQGDTDIFITPGYRFNVADRLITNFHLPKS TLLMLVAAFSGMEHIRAVYRHAVEHEYRFFSYGDAMLLGRAGR >gi|289656340|gb|ADEA01000027.1| GENE 173 180533 - 180692 302 53 aa, chain + ## HITS:1 COG:NMA0597 KEGG:ns NR:ns ## COG: NMA0597 COG0511 # Protein_GI_number: 15793587 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxyl carrier protein # Organism: Neisseria meningitidis Z2491 # 1 34 1 34 151 58 100.0 4e-09 MDLRKLKKLIDLVEESGIAEIEVTEGEEKVRITRATAAQPVFAAPAAIAPVAA Prediction of potential genes in microbial genomes Time: Thu May 26 13:41:45 2011 Seq name: gi|289656339|gb|ADEA01000028.1| Neisseria sp. oral taxon 014 str. F0314 cont1.28, whole genome shotgun sequence Length of sequence - 144534 bp Number of predicted genes - 131, with homology - 124 Number of transcription units - 74, operones - 32 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 58 - 270 378 ## COG0511 Biotin carboxyl carrier protein 2 1 Op 2 . + CDS 339 - 539 301 ## Rmet_6286 hypothetical protein 3 2 Op 1 3/0.000 + CDS 676 - 2046 2458 ## COG0439 Biotin carboxylase + Term 2060 - 2118 10.4 + Prom 2083 - 2142 5.5 4 2 Op 2 . + CDS 2212 - 3099 1382 ## PROTEIN SUPPORTED gi|121634223|ref|YP_974468.1| ribosomal protein L11 methyltransferase + Term 3101 - 3139 1.4 - Term 3171 - 3212 11.3 5 3 Tu 1 . - CDS 3290 - 3931 670 ## SUN_1494 hypothetical protein - Prom 4030 - 4089 7.0 6 4 Tu 1 . - CDS 4133 - 5908 2067 ## COG4166 ABC-type oligopeptide transport system, periplasmic component - Prom 5934 - 5993 2.5 - Term 5967 - 6019 17.7 7 5 Tu 1 . - CDS 6040 - 7266 1663 ## COG1295 Predicted membrane protein - Prom 7339 - 7398 3.2 + Prom 7217 - 7276 5.3 8 6 Tu 1 . + CDS 7366 - 7971 976 ## COG0655 Multimeric flavodoxin WrbA + Prom 8064 - 8123 3.5 9 7 Op 1 3/0.000 + CDS 8329 - 8613 552 ## COG0640 Predicted transcriptional regulators 10 7 Op 2 . + CDS 8736 - 9506 1446 ## COG0708 Exonuclease III - Term 9530 - 9582 16.7 11 8 Tu 1 . - CDS 9600 - 11174 2487 ## COG0306 Phosphate/sulphate permeases - Prom 11317 - 11376 2.3 + Prom 11281 - 11340 2.3 12 9 Tu 1 . + CDS 11482 - 12543 1458 ## COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases + Term 12719 - 12772 6.4 - Term 12574 - 12624 19.4 13 10 Op 1 . - CDS 12654 - 13793 1700 ## COG0116 Predicted N6-adenine-specific DNA methylase 14 10 Op 2 2/0.294 - CDS 13876 - 14496 1276 ## COG0009 Putative translation factor (SUA5) - Prom 14524 - 14583 5.8 - Term 14548 - 14592 13.2 15 11 Tu 1 . - CDS 14616 - 15827 2041 ## COG0282 Acetate kinase - Prom 15873 - 15932 2.1 - Term 16096 - 16126 -1.0 16 12 Tu 1 . - CDS 16136 - 17305 1715 ## COG2828 Uncharacterized protein conserved in bacteria - Term 17503 - 17545 -0.2 17 13 Tu 1 . - CDS 17714 - 20323 3853 ## COG1048 Aconitase A - Prom 20392 - 20451 3.1 18 14 Op 1 9/0.000 - CDS 20711 - 21865 2137 ## COG0372 Citrate synthase 19 14 Op 2 1/0.471 - CDS 21947 - 22822 1145 ## COG2513 PEP phosphonomutase and related enzymes - Prom 22957 - 23016 6.0 - Term 23766 - 23815 14.4 20 15 Tu 1 . - CDS 23829 - 25148 2108 ## COG2252 Permeases - Prom 25366 - 25425 7.0 + Prom 25330 - 25389 8.1 21 16 Tu 1 . + CDS 25481 - 25648 85 ## + Term 25679 - 25734 11.4 + Prom 25914 - 25973 5.0 22 17 Tu 1 . + CDS 25997 - 26929 1326 ## COG0679 Predicted permeases + Prom 26997 - 27056 4.1 23 18 Tu 1 . + CDS 27150 - 28385 1995 ## COG0786 Na+/glutamate symporter + Term 28404 - 28438 4.5 + Prom 28408 - 28467 4.1 24 19 Tu 1 . + CDS 28557 - 30875 2687 ## COG4258 Predicted exporter + Prom 30883 - 30942 6.5 25 20 Tu 1 . + CDS 30977 - 32218 1697 ## COG0644 Dehydrogenases (flavoproteins) + Term 32223 - 32266 1.2 + Prom 32244 - 32303 3.8 26 21 Tu 1 . + CDS 32519 - 33103 962 ## COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) + Prom 33286 - 33345 2.5 27 22 Op 1 . + CDS 33384 - 33914 804 ## D11S_0529 lipoprotein, putative 28 22 Op 2 . + CDS 33914 - 35131 1463 ## COG0304 3-oxoacyl-(acyl-carrier-protein) synthase + Term 35168 - 35218 13.3 + Prom 35497 - 35556 4.9 29 23 Tu 1 . + CDS 35588 - 36925 2144 ## COG0733 Na+-dependent transporters of the SNF family + Term 37006 - 37071 14.6 + Prom 37220 - 37279 6.6 30 24 Tu 1 . + CDS 37370 - 38032 932 ## COG1335 Amidases related to nicotinamidase + Term 38070 - 38103 4.4 31 25 Op 1 . + CDS 38435 - 40837 3074 ## Asuc_0855 hypothetical protein 32 25 Op 2 . + CDS 40912 - 41487 1008 ## gi|298370030|ref|ZP_06981346.1| salivary glue protein Sgs-4 33 26 Op 1 6/0.000 + CDS 41593 - 43437 2689 ## COG0726 Predicted xylanase/chitin deacetylase 34 26 Op 2 . + CDS 43573 - 44790 1825 ## COG1215 Glycosyltransferases, probably involved in cell wall biogenesis 35 26 Op 3 . + CDS 44819 - 45130 422 ## gi|298370033|ref|ZP_06981349.1| hypothetical protein HMPREF9016_01367 + Term 45137 - 45178 11.3 + Prom 45145 - 45204 10.8 36 27 Tu 1 . + CDS 45282 - 47294 2976 ## COG1629 Outer membrane receptor proteins, mostly Fe transport + Term 47309 - 47359 7.2 - Term 47368 - 47396 0.5 37 28 Tu 1 . - CDS 47412 - 48968 2106 ## COG1253 Hemolysins and related proteins containing CBS domains - Prom 49118 - 49177 4.0 - Term 49156 - 49197 11.3 38 29 Op 1 8/0.000 - CDS 49205 - 49864 930 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 39 29 Op 2 . - CDS 49861 - 51759 2455 ## COG3850 Signal transduction histidine kinase, nitrate/nitrite-specific - Prom 51917 - 51976 1.6 - Term 51857 - 51896 4.4 40 30 Op 1 2/0.294 - CDS 51985 - 53367 1815 ## COG2223 Nitrate/nitrite transporter 41 30 Op 2 2/0.294 - CDS 53461 - 54687 1925 ## COG2223 Nitrate/nitrite transporter 42 31 Op 1 12/0.000 - CDS 54791 - 55474 1138 ## COG2181 Nitrate reductase gamma subunit 43 31 Op 2 12/0.000 - CDS 55491 - 56141 1219 ## COG2180 Nitrate reductase delta subunit 44 31 Op 3 . - CDS 56141 - 57709 2399 ## COG1140 Nitrate reductase beta subunit 45 31 Op 4 . - CDS 57777 - 58121 626 ## COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain 46 31 Op 5 . - CDS 58190 - 61870 5479 ## COG5013 Nitrate reductase alpha subunit - Prom 61902 - 61961 3.6 47 32 Op 1 . - CDS 62234 - 63136 1122 ## COG4973 Site-specific recombinase XerC 48 32 Op 2 . - CDS 63140 - 63568 641 ## Dbac_1354 esterase - Prom 63717 - 63776 3.2 + Prom 63711 - 63770 8.6 49 33 Tu 1 . + CDS 63811 - 64875 1899 ## COG0191 Fructose/tagatose bisphosphate aldolase + Prom 64992 - 65051 4.9 50 34 Tu 1 . + CDS 65251 - 65499 199 ## gi|298370049|ref|ZP_06981365.1| RNA-binding protein 33 + Term 65527 - 65575 2.2 - Term 65687 - 65724 8.7 51 35 Op 1 5/0.000 - CDS 65751 - 65936 238 ## COG3024 Uncharacterized protein conserved in bacteria - Prom 65972 - 66031 1.5 52 35 Op 2 7/0.000 - CDS 66035 - 66643 330 ## COG0237 Dephospho-CoA kinase 53 35 Op 3 7/0.000 - CDS 66645 - 67508 711 ## COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases 54 35 Op 4 24/0.000 - CDS 67510 - 68751 1071 ## COG1459 Type II secretory pathway, component PulF - Term 68775 - 68818 6.1 55 35 Op 5 . - CDS 68833 - 70512 1547 ## COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB - TRNA 70810 - 70885 95.4 # Phe GAA 0 0 + Prom 71043 - 71102 4.4 56 36 Tu 1 . + CDS 71129 - 71689 502 ## gi|298370056|ref|ZP_06981372.1| conserved hypothetical protein + Term 71768 - 71813 16.0 - Term 71755 - 71801 16.2 57 37 Op 1 41/0.000 - CDS 71825 - 73459 2071 ## PROTEIN SUPPORTED gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 58 37 Op 2 . - CDS 73567 - 73854 515 ## COG0234 Co-chaperonin GroES (HSP10) - Prom 73874 - 73933 2.5 - Term 73995 - 74043 12.8 59 38 Tu 1 . - CDS 74071 - 74865 1040 ## COG0561 Predicted hydrolases of the HAD superfamily - Prom 75007 - 75066 1.8 + Prom 74966 - 75025 4.1 60 39 Tu 1 . + CDS 75050 - 76060 1054 ## COG0276 Protoheme ferro-lyase (ferrochelatase) + Term 76074 - 76114 9.8 61 40 Op 1 . - CDS 76119 - 76223 81 ## 62 40 Op 2 . - CDS 76282 - 76401 68 ## 63 40 Op 3 . - CDS 76469 - 76585 154 ## - Prom 76761 - 76820 14.0 - Term 77080 - 77121 10.0 64 41 Tu 1 . - CDS 77140 - 77946 450 ## COG0463 Glycosyltransferases involved in cell wall biogenesis - Prom 77991 - 78050 4.0 - Term 77985 - 78023 4.1 65 42 Op 1 31/0.000 - CDS 78055 - 78990 1472 ## COG0341 Preprotein translocase subunit SecF 66 42 Op 2 25/0.000 - CDS 78994 - 80856 2298 ## COG0342 Preprotein translocase subunit SecD - Term 80874 - 80910 2.0 67 42 Op 3 . - CDS 80928 - 81194 433 ## COG1862 Preprotein translocase subunit YajC - Prom 81278 - 81337 7.5 + Prom 81226 - 81285 4.5 68 43 Tu 1 . + CDS 81382 - 82491 718 ## COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein + Term 82572 - 82606 1.1 + Prom 82497 - 82556 4.5 69 44 Op 1 . + CDS 82708 - 83772 1907 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases + Term 83794 - 83834 9.8 70 44 Op 2 . + CDS 83891 - 85030 1538 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family + Term 85049 - 85087 10.2 - Term 85037 - 85075 10.2 71 45 Op 1 . - CDS 85096 - 85617 487 ## gi|298370069|ref|ZP_06981385.1| conserved hypothetical protein 72 45 Op 2 . - CDS 85647 - 86465 197 ## gi|298370070|ref|ZP_06981386.1| conserved hypothetical protein 73 45 Op 3 . - CDS 86498 - 87097 207 ## gi|298370071|ref|ZP_06981387.1| hypothetical protein HMPREF9016_01405 - Prom 87189 - 87248 5.5 + Prom 87133 - 87192 5.8 74 46 Tu 1 . + CDS 87427 - 89022 2313 ## COG4108 Peptide chain release factor RF-3 + Term 89031 - 89067 7.3 - Term 89020 - 89054 4.7 75 47 Tu 1 . - CDS 89070 - 89840 930 ## COG0730 Predicted permeases - Prom 89870 - 89929 3.4 + Prom 89910 - 89969 3.8 76 48 Tu 1 . + CDS 90024 - 90230 115 ## COG2862 Predicted membrane protein + Prom 90250 - 90309 2.4 77 49 Tu 1 . + CDS 90372 - 90488 84 ## gi|298370074|ref|ZP_06981390.1| hypothetical protein HMPREF9016_01409 + Term 90563 - 90589 -1.0 - Term 90599 - 90650 4.0 78 50 Op 1 8/0.000 - CDS 90676 - 91194 905 ## COG3009 Uncharacterized protein conserved in bacteria 79 50 Op 2 11/0.000 - CDS 91194 - 92855 1857 ## COG3008 Paraquat-inducible protein B 80 50 Op 3 . - CDS 92852 - 94165 937 ## COG2995 Uncharacterized paraquat-inducible protein A - Prom 94194 - 94253 4.7 - Term 94305 - 94348 9.4 81 51 Tu 1 . - CDS 94367 - 95518 707 ## COG3203 Outer membrane protein (porin) - Prom 95712 - 95771 12.8 + Prom 95993 - 96052 3.0 82 52 Tu 1 . + CDS 96121 - 96264 130 ## - Term 96819 - 96864 9.2 83 53 Tu 1 . - CDS 96878 - 99229 1716 ## COG3170 Tfp pilus assembly protein FimV - Prom 99314 - 99373 7.7 + Prom 99433 - 99492 4.2 84 54 Op 1 3/0.000 + CDS 99517 - 100053 639 ## COG2917 Intracellular septation protein A 85 54 Op 2 2/0.294 + CDS 100053 - 100343 436 ## COG2350 Uncharacterized protein conserved in bacteria 86 54 Op 3 3/0.000 + CDS 100343 - 100612 167 ## COG0271 Stress-induced morphogen (activity unknown) 87 54 Op 4 2/0.294 + CDS 100634 - 101506 1307 ## COG0760 Parvulin-like peptidyl-prolyl isomerase + Term 101558 - 101611 6.0 88 55 Tu 1 . + CDS 101626 - 102087 591 ## COG1490 D-Tyr-tRNAtyr deacylase + Term 102147 - 102211 9.0 + Prom 102100 - 102159 6.5 89 56 Tu 1 . + CDS 102247 - 102339 59 ## + Term 102442 - 102478 -0.5 - Term 102482 - 102537 14.1 90 57 Op 1 . - CDS 102554 - 104230 2544 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains - Prom 104310 - 104369 4.5 - Term 104341 - 104384 10.0 91 57 Op 2 . - CDS 104408 - 105463 1813 ## COG0176 Transaldolase - Prom 105524 - 105583 5.2 + Prom 105455 - 105514 4.4 92 58 Tu 1 . + CDS 105565 - 106539 1400 ## COG0794 Predicted sugar phosphate isomerase involved in capsule formation + Term 106626 - 106664 6.7 - Term 106446 - 106480 0.7 93 59 Op 1 . - CDS 106710 - 107282 826 ## COG2818 3-methyladenine DNA glycosylase 94 59 Op 2 12/0.000 - CDS 107279 - 107962 867 ## COG0132 Dethiobiotin synthetase 95 59 Op 3 . - CDS 107952 - 109241 1651 ## COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase - Term 109300 - 109358 18.3 96 60 Op 1 18/0.000 - CDS 109363 - 109749 642 ## COG0509 Glycine cleavage system H protein (lipoate-binding) - Prom 109792 - 109851 1.7 97 60 Op 2 . - CDS 109869 - 110969 1884 ## COG0404 Glycine cleavage system T protein (aminomethyltransferase) + Prom 111405 - 111464 6.6 98 61 Op 1 . + CDS 111524 - 112006 610 ## COG1522 Transcriptional regulators + Term 112027 - 112072 12.0 + Prom 112022 - 112081 6.0 99 61 Op 2 . + CDS 112117 - 112479 241 ## COG2832 Uncharacterized protein conserved in bacteria + Term 112482 - 112530 16.5 + Prom 112699 - 112758 5.0 100 62 Op 1 . + CDS 112857 - 114272 2043 ## COG1055 Na+/H+ antiporter NhaD and related arsenite permeases + Term 114288 - 114326 10.2 + Prom 114319 - 114378 2.2 101 62 Op 2 . + CDS 114468 - 115283 1002 ## COG3315 O-Methyltransferase involved in polyketide biosynthesis + Term 115318 - 115359 12.0 - Term 115306 - 115347 12.0 102 63 Tu 1 . - CDS 115415 - 115978 758 ## COG0790 FOG: TPR repeat, SEL1 subfamily - Prom 116065 - 116124 6.9 + Prom 116029 - 116088 3.5 103 64 Op 1 13/0.000 + CDS 116134 - 117213 1310 ## COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 104 64 Op 2 . + CDS 117250 - 118167 1174 ## COG0131 Imidazoleglycerol-phosphate dehydratase 105 64 Op 3 . + CDS 118180 - 118476 354 ## gi|298370101|ref|ZP_06981417.1| hypothetical protein HMPREF9016_01436 + Term 118510 - 118569 15.2 + Prom 118594 - 118653 6.9 106 65 Op 1 . + CDS 118900 - 120936 2898 ## gi|298370102|ref|ZP_06981418.1| mucin-2 + Prom 120990 - 121049 4.2 107 65 Op 2 . + CDS 121098 - 121970 1482 ## COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases + Term 121984 - 122042 21.7 + Prom 122132 - 122191 4.8 108 66 Op 1 25/0.000 + CDS 122229 - 122876 964 ## COG0118 Glutamine amidotransferase + Prom 122978 - 123037 5.2 109 66 Op 2 . + CDS 123115 - 123858 1134 ## COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase + Prom 123910 - 123969 6.1 110 67 Op 1 . + CDS 124002 - 124319 562 ## gi|298370106|ref|ZP_06981422.1| 1-(5-phosphoribosyl)-5- ((5'-phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomerase + Term 124375 - 124406 1.5 111 67 Op 2 24/0.000 + CDS 124417 - 125184 1293 ## COG0107 Imidazoleglycerol-phosphate synthase + Term 125230 - 125265 1.1 + Prom 125190 - 125249 3.2 112 67 Op 3 . + CDS 125284 - 125682 700 ## COG0139 Phosphoribosyl-AMP cyclohydrolase 113 67 Op 4 . + CDS 125663 - 125809 67 ## 114 67 Op 5 2/0.294 + CDS 125837 - 126160 568 ## COG0140 Phosphoribosyl-ATP pyrophosphohydrolase + Term 126253 - 126283 0.4 115 68 Op 1 2/0.294 + CDS 126309 - 126632 536 ## COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 116 68 Op 2 16/0.000 + CDS 126707 - 126913 561 ## COG1826 Sec-independent protein secretion pathway components 117 68 Op 3 28/0.000 + CDS 126917 - 127570 858 ## COG1826 Sec-independent protein secretion pathway components 118 68 Op 4 . + CDS 127578 - 128354 1004 ## COG0805 Sec-independent protein secretion pathway component TatC + Term 128370 - 128418 13.1 + Prom 128400 - 128459 5.9 119 69 Op 1 2/0.294 + CDS 128483 - 128863 367 ## COG3308 Predicted membrane protein 120 69 Op 2 1/0.471 + CDS 128856 - 130733 2381 ## COG3307 Lipid A core - O-antigen ligase and related enzymes + Prom 130756 - 130815 2.4 121 70 Op 1 40/0.000 + CDS 130896 - 131573 1200 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 122 70 Op 2 3/0.000 + CDS 131589 - 132962 1884 ## COG0642 Signal transduction histidine kinase + Term 133003 - 133040 -0.1 + Prom 133045 - 133104 3.4 123 70 Op 3 2/0.294 + CDS 133171 - 135576 2969 ## COG1042 Acyl-CoA synthetase (NDP forming) 124 70 Op 4 12/0.000 + CDS 135653 - 135901 392 ## PROTEIN SUPPORTED gi|15676497|ref|NP_273636.1| 30S ribosomal protein S16 125 70 Op 5 30/0.000 + CDS 135918 - 136427 176 ## PROTEIN SUPPORTED gi|163796730|ref|ZP_02190688.1| 50S ribosomal protein L19 126 70 Op 6 33/0.000 + CDS 136427 - 137173 570 ## COG0336 tRNA-(guanine-N1)-methyltransferase 127 70 Op 7 . + CDS 137187 - 137552 588 ## PROTEIN SUPPORTED gi|225075461|ref|ZP_03718660.1| hypothetical protein NEIFLAOT_00466 + Term 137571 - 137605 5.0 + Prom 137592 - 137651 4.3 128 71 Tu 1 . + CDS 137829 - 139043 578 ## COG1914 Mn2+ and Fe2+ transporters of the NRAMP family - Term 139110 - 139178 14.4 129 72 Tu 1 . - CDS 139201 - 140538 1385 ## COG0334 Glutamate dehydrogenase/leucine dehydrogenase 130 73 Tu 1 . + CDS 140925 - 141719 449 ## COG0207 Thymidylate synthase + Term 141782 - 141832 9.4 - Term 141882 - 141927 6.3 131 74 Tu 1 . - CDS 141935 - 144532 2181 ## BPP0974 putative hemolysin Predicted protein(s) >gi|289656339|gb|ADEA01000028.1| GENE 1 58 - 270 378 70 aa, chain + ## HITS:1 COG:NMA0597 KEGG:ns NR:ns ## COG: NMA0597 COG0511 # Protein_GI_number: 15793587 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxyl carrier protein # Organism: Neisseria meningitidis Z2491 # 1 69 82 150 151 120 89.0 8e-28 MVGTFYRAPGPNAPAFVEIGQQVKAGDTLCIIEAMKLMNEIEAEKSGVIKEILVDNGTPV EYGEPLFIIE >gi|289656339|gb|ADEA01000028.1| GENE 2 339 - 539 301 66 aa, chain + ## HITS:1 COG:no KEGG:Rmet_6286 NR:ns ## KEGG: Rmet_6286 # Name: not_defined # Def: hypothetical protein # Organism: R.metallidurans # Pathway: not_defined # 1 65 1 65 65 94 80.0 1e-18 MRLLLALLLPWLQFFTIGRPIAGIICLILQLTLIGWVPAAIWSVYALSQYKTDQKIRNAL GAADRR >gi|289656339|gb|ADEA01000028.1| GENE 3 676 - 2046 2458 456 aa, chain + ## HITS:1 COG:NMB1861 KEGG:ns NR:ns ## COG: NMB1861 COG0439 # Protein_GI_number: 15677696 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxylase # Organism: Neisseria meningitidis MC58 # 1 453 1 453 453 832 91.0 0 MLKKVLIANRGEIALRVLRACREMGIATVAVHSEADKDSLHVKLADESVCIGPAASAQSY LNIPAIIAAAEVTGADGIHPGYGFLAENANFAEQVEQSGFTFIGPRAETIRLMGDKVSAK HAMIEAGVPCVPGSDGALPDDPAEILKTADKVGYPVIIKASGGGGGRGMRVVERKEDLIK SVEMTKTEAGAAFGNPMVYMERYLQRPRHVEIQVLADEHGNAIYLAERDCSLQRRHQKVI EEAPAPFITAEQREKIGQACADACKRIGYRGAGTFEFLYEDGEFFFIEMNTRVQVEHPVT ELITGVDIVQEQIRIAGGLPLQYRQKDIKVEGHAFECRINAEDPYNFIPSPGLIESCHLP GGFGIRVDSHIYQGYRIPPYYDSLIGKICVIGKTRGQAMAKMRVALAELAVTGIKTNTPL HRDLFNDQGFQEGGVSIHYLEHWLEERKERKEKEAE >gi|289656339|gb|ADEA01000028.1| GENE 4 2212 - 3099 1382 295 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|121634223|ref|YP_974468.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis FAM18] # 1 295 1 295 295 536 88 1e-151 MPYQQITIAVNDHLAERLADALMEHGALSAAIEDAYAGTENEQAIFGEPGMPAEQIWQQS KVIALFGEHDEAAAVVKAAAQECGLKDLSYDSETLEDQDWVRLTQSQFDPIQISERLWIT PSWHKAPVGNAVNLQLDPGLAFGTGSHPTTRLCLKWLDTQLKGGESVLDYGCGSGILTIA ALKLGAGSAVGVDIDEQAIRASNDNAAQNDVQAHFYLPDGLPQGQFDVVVANILANPLRM LGEMLAARTKQGGRIVLSGLLAEQSEELGEIYSQWFDIEPAETEEGWARLSGVKR >gi|289656339|gb|ADEA01000028.1| GENE 5 3290 - 3931 670 213 aa, chain - ## HITS:1 COG:no KEGG:SUN_1494 NR:ns ## KEGG: SUN_1494 # Name: not_defined # Def: hypothetical protein # Organism: Sulfurovum_NBC37-1 # Pathway: not_defined # 18 193 14 189 258 116 30.0 5e-25 MQLTDYTGTFSDGLFPYLWWIIPLAAAAYLSKSMLLKHFFERFAVNTQAQCRLDAEHYHE FRNLDIRSNGRHEQIDYVYVSRFGIFVVAAPGCQGRISGDSGGAFWREEYHKHKTDFPNP LLKNQMYIQALAKQLELSPRMFYSVVAVTGNCQFQSVMPDNVLDVADFADYIAQYGEEVL DDLEVARIKSALEVNEFDVVFSRTGFDKQAWES >gi|289656339|gb|ADEA01000028.1| GENE 6 4133 - 5908 2067 591 aa, chain - ## HITS:1 COG:RSc1173 KEGG:ns NR:ns ## COG: RSc1173 COG4166 # Protein_GI_number: 17545892 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Ralstonia solanacearum # 29 590 40 619 625 460 44.0 1e-129 MKTAVLAALCLSASHAFAAHALSLGQPPKYPAGFKAFDYVNPDAPKGGTFTLPVQGGFDT LNPFTLKGDHEAGTAMLTLDTLMEKSLDEPFTMYGLLAEDAALASDGLSVTFRLNPKAKF HNGDPVLAEDVAYSFKTLTQDKAAAPMYKFYWADVAAVKTPAPRTVVFRFKKRNAELHMI LGELPVFSHKSFPKGLEAAANTLPVGSGPYRFAKAEGGRLSEFVRDKGYWARNLPAGRGR YNFDVVRFKYFKDDSVRIEGIKSGQYDFVQENIARNWARAYPADMLKKRGLSKHEWIQHS TAGMQGFVMNMRRKPFDDIRVRRAIVESFDFDNVNSRLFYSTYRRSNSFFTNSDMAAFGK PSGGELALLEPLRAQLPAAVFTENVPEPPKTDPKTGVRPQLLKARALLEQAGYRYRNGRL EDRQGRPLTFEFLSPSKTYERVVAKWQRDLAKIGVGMTVRLADSAVYQKRINGFDFDMTI TVYANSESPGNEQFDYFSCASAKTDGSRNLAGVCSPAVETLLKGFGGFKNRREQTTSARA LDRVIRHQYIIVPNWFSDRYRVVYRDTLGIPKTLPQYYSPMAWAVGAGWKK >gi|289656339|gb|ADEA01000028.1| GENE 7 6040 - 7266 1663 408 aa, chain - ## HITS:1 COG:NMB0524 KEGG:ns NR:ns ## COG: NMB0524 COG1295 # Protein_GI_number: 15676431 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis MC58 # 1 406 1 406 406 555 71.0 1e-158 MPFSVWWQGLAKGKLFGFAWFVVRRFNEVRVPQVAASLTFTSLLALVPVLTVAVVIASAF PVFDEWSNSFVGFINRTIVPQGADMVFDYLNQFRAKASRLTAIGSVMLVVTSLLLIQTVD STFNRIWRVSAQRPLLMQFLVYWALLTFGPLSLGVGLSLLFGLLHGSGLETSSPLLAGWL KVGVSVGCSTAVLWFVYCFVPNRYVPARQALAGAFLTAACLEIARILFAWYMGRFNGYTS IYGAFAAVPFFLLWLHLLWTLVLSGAVLTASLSYWQGEAFRRNFDSRGRFDDVLKILLLL DTAQQTGRALPVREFRKHINMGYDELGELLEKLARHGYVYAGKQGWVLKTGAESIELAEL FKLFVYRPAAVNKDSVNATVGHIMQPCLETMNMSLAEFSVHTQKREKE >gi|289656339|gb|ADEA01000028.1| GENE 8 7366 - 7971 976 201 aa, chain + ## HITS:1 COG:RSc1558 KEGG:ns NR:ns ## COG: RSc1558 COG0655 # Protein_GI_number: 17546277 # Func_class: R General function prediction only # Function: Multimeric flavodoxin WrbA # Organism: Ralstonia solanacearum # 8 201 8 201 201 227 60.0 8e-60 MNPNSLKILVLFYSRRGSTLNLARQIARGIESVSGCEAVVRTVPGVSAVCEAVEKDVPDS GAPYATAEDLKTCSGLALGSPSHFGNMAAAMKYFIDGTIPQWLGAELAGKPATVFTSTGN LHGGQESTLLTMMLPLLHHGMIISGIPFSEHALNHTQSGGTPYGASHVAGHDGKAALTPD EHEIAFAQGKRLAELAVKLAG >gi|289656339|gb|ADEA01000028.1| GENE 9 8329 - 8613 552 94 aa, chain + ## HITS:1 COG:NMB0398 KEGG:ns NR:ns ## COG: NMB0398 COG0640 # Protein_GI_number: 15676312 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Neisseria meningitidis MC58 # 1 93 1 93 93 91 55.0 3e-19 MENQRISTLLKLVANPERRAILFLLLDSEHSVPELAEAVGLSATSISNHLAKLRTEGVVD FTRYHRVIEYRLTSDATATLLRTLRQLQNTPAAA >gi|289656339|gb|ADEA01000028.1| GENE 10 8736 - 9506 1446 256 aa, chain + ## HITS:1 COG:NMB0399 KEGG:ns NR:ns ## COG: NMB0399 COG0708 # Protein_GI_number: 15676313 # Func_class: L Replication, recombination and repair # Function: Exonuclease III # Organism: Neisseria meningitidis MC58 # 1 255 1 255 256 447 84.0 1e-125 MKITTWNVNSLNVRLPQVQNWLADHQPDILVLQELKLDQDKFPAAALQMMGWHSVWSGQK TYNGVAIISRSEPQDVHTGLPAMPDDPQRRVIAATIGGVRVINVYCVNGEAPDSPKFQYK QQWFAALTEFVRDEMARYEKLVLLGDFNIAPTDDDCYDAEKWRGKILCTDSERGWFKNLL DLGLTDSLRKIHPEGAFYTWFDYRGAMFQRGLGLRIDHLLVSPALSAVLKDVQVDSDARA QERPSDHAPVWAEFDL >gi|289656339|gb|ADEA01000028.1| GENE 11 9600 - 11174 2487 524 aa, chain - ## HITS:1 COG:NMA2109 KEGG:ns NR:ns ## COG: NMA2109 COG0306 # Protein_GI_number: 15794983 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate/sulphate permeases # Organism: Neisseria meningitidis Z2491 # 1 524 1 524 524 830 84.0 0 MRPTQTSADLKLINIMFAAMLVSMTGYFIYWGLGYTHYSHPGLFLLATLFGVFMAFNVGG NDIANSFGTSVGSGTLTIPQALLIAAVFEVSGAVIAGGEVTDTIRKGIVDLNAVNLEPMQ FVYIMMSALLAAALWLLFASRKGLPVSTTHAIIGGIVGSTLCVAVMADADAGAMVRWGKL GEIAVSWVLSPVLGGAVSLLVFSQIKKYVLDYNAWADETLKGIKQEKKAYKEQHRLFFEG LSESEKVEYATKMAHDAQIYDEPDFEPEELQSDYYRGLYELDNRKNSIDSYKALHSWVPF IASIGGMLISAMLIFKGLKNLQLGMSNVNSFLTIFMIGAAVWMGTFVFAKNLKRKDLGKS TFQMFSWMQVFTACGFAFSHGANDIANAIGPFAAIMDVLRTGSIAEQNAVPSIAMLTFGI ALIVGLWFIGKEVIKTVGSNLAAMHPASGFTAELSAAAVVMAASFMGLPVSSTHILVGAV LGIGLVNRNANWALMKPIGLAWVITLPAAAVLAVVCYLILQAVF >gi|289656339|gb|ADEA01000028.1| GENE 12 11482 - 12543 1458 353 aa, chain + ## HITS:1 COG:NMA2111 KEGG:ns NR:ns ## COG: NMA2111 COG2377 # Protein_GI_number: 15794984 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted molecular chaperone distantly related to HSP70-fold metalloproteases # Organism: Neisseria meningitidis Z2491 # 1 352 16 366 367 499 71.0 1e-141 MDGADAVLIRMEGTQWREAAAHAFVPYSDGLRQQLLDLQDVGANELHRSRMLAQTLSRLY AQTVGKLLHDTGLTPAQITAVGCHGQTVRHAPEHGYSIQLADLPLLAELSGILTVGDFRS RDIAAGGQGAPLVPAFHQALFGHPAETRVVLNIGGISNISILPPDAPAAGFDTGPGNMLM DAWMRHIWQLPYDQNGEKAAQGQVLPELFATLLDHPYFSLPHPKSTGRELFSLDWLQGRL KGGEQPEDVLKTLLEYTAQTVFDAVVSTAPDVRNIYVCGGGIRNGALTASLNTLFAPKDI RLHSTAELGLDPQWVEAAAFGWLAACWFNRLPGNPHRATGASKPCILGAGHYA >gi|289656339|gb|ADEA01000028.1| GENE 13 12654 - 13793 1700 379 aa, chain - ## HITS:1 COG:NMA2030 KEGG:ns NR:ns ## COG: NMA2030 COG0116 # Protein_GI_number: 15794910 # Func_class: L Replication, recombination and repair # Function: Predicted N6-adenine-specific DNA methylase # Organism: Neisseria meningitidis Z2491 # 2 379 3 380 380 574 74.0 1e-164 MTVYSLFTTCPRGLEEPLAAELQALGCTDVRSADGGVSCRGAMEQVYRINLWSRVASRVL LRLAKGGYRNEHDIYKLAKNIDWAAWFAPEQTFKVKVEGKRANVKSLDFVGLKIKDALCD AFREACGIRPSVDKARPDVRVHAFVGEREVQIFLDTSGEALFKRGYRQDAGEAPLRENLA AGLLLLAGYDGTQPFQDPFCGSGTIVIEAAWIAAGRAPGLMRRFGFEKLKNFDRGAWEEI RRQAAARIKPPSAALSGSDNDRRMIHTAQANAQAAEAGGWIEWDVCDAQAARPNGEGGIM ISNPPYGVRLAEVQALQALYPQLGTWLKQHYAGWLTGMFTADRNMPKFMRLSPKRKIPLY NGNLDCRLFLMDMVEGSNR >gi|289656339|gb|ADEA01000028.1| GENE 14 13876 - 14496 1276 206 aa, chain - ## HITS:1 COG:NMB0436 KEGG:ns NR:ns ## COG: NMB0436 COG0009 # Protein_GI_number: 15676348 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation factor (SUA5) # Organism: Neisseria meningitidis MC58 # 1 206 8 213 213 356 87.0 1e-98 MAQFFAIHPDNPQERLVKQAADIIRNGGVVVYPTDSCYALGCKLGDKAAMERILAIRKID LKHHLTLMCADLRELGTYAKVDNAQFRQLKAATPGSYTFILQATKEVPNRTLHPKRKTIG LRVPDNTIALSLLQELGEPLLSCTLMLPEDDEPLTDPYEIRDRLEHAVDLVIDGGWCGTE PTTVIDMTDGTVLIREGKGDKALFGL >gi|289656339|gb|ADEA01000028.1| GENE 15 14616 - 15827 2041 403 aa, chain - ## HITS:1 COG:NMB0435 KEGG:ns NR:ns ## COG: NMB0435 COG0282 # Protein_GI_number: 15676347 # Func_class: C Energy production and conversion # Function: Acetate kinase # Organism: Neisseria meningitidis MC58 # 1 399 1 399 399 759 94.0 0 MSDQLILVLNCGSSSLKGAVIDRKSGSVVLSCLGERLGTPEAVITFNKDGNKRQVPLTGR NCHAGAVGMLLNELEKHGLHDRIKAIGHRIAHGGEKYHESVLIDQDVLDELKACIPLAPL HNPANISGILAAQEHFPGLPNVGVMDTSFHQTMPERAYTYAVPRELRKKYAFRRYGFHGT SMRYVAPEAARILGKPLEDLRMIVAHLGNGASITAIRNGKSVDTSMGFTPIEGLVMGTRC GDIDPGVYSYLTAHAGMNIEQVDEMLNKKSGLLGISELSNDCRTLEIAADEGHEGARLAL EVMTYRLAKYIASMSVACGGIDALVFTGGIGENSRNIRAKTVAYLDYLGLHIDTKANMEK RYGNSGIISPKDSTPAVLVVPTNEELMIAHDTAGLAGFLEETG >gi|289656339|gb|ADEA01000028.1| GENE 16 16136 - 17305 1715 389 aa, chain - ## HITS:1 COG:NMA2051 KEGG:ns NR:ns ## COG: NMA2051 COG2828 # Protein_GI_number: 15794929 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 389 1 389 389 702 95.0 0 MPQIKIPAVYYRGGTSKGVFFKRSDLPEAAREAGSTRDKILLRVLGSPDPYGKQIDGLGN ASSSTSKAVILDKSERAGHDVDYLFGQVSIDKPFVDWSGNCGNLTAAVGAFAIEQGLVDK GKIPSDGICTVKIWQKNIGKTIIAHVPMQNGEVLETGDFELDGVTFPAAEVQIEFLDPAD GEGSMFPTGNLVDELDVPGIGRLKATLINAGIPTVFLNAADLGYTGKELQDDINNDAAAL EKFEKIRAYGALKMGLINDVSEAAARAHTPKVAFVAPAADYTASSGKTVNAADIDLLVRA LSMGKLHHAMMGTASVAIAAAAAVPGTLVNLAAGGGTRNEVRFGHPSGTLRVGAAAECSD GIWAVKKAVMSRSARVIMEGRVRVPDDCF >gi|289656339|gb|ADEA01000028.1| GENE 17 17714 - 20323 3853 869 aa, chain - ## HITS:1 COG:NMB0433 KEGG:ns NR:ns ## COG: NMB0433 COG1048 # Protein_GI_number: 15676345 # Func_class: C Energy production and conversion # Function: Aconitase A # Organism: Neisseria meningitidis MC58 # 1 869 1 868 868 1692 96.0 0 MAANQRYRKPLPGTDLEYYDARAACEDIKPGSYDKLPYTSRILAENLVNRADKVDLPTLQ SWLGQLIDGKQEIDFPWYPARVVCHDILGQTALVDLAGLRDAIAEKGGDPSKVNPVVQTQ LIVDHSLAVECGGYDPDAFRKNREIEDRRNEDRFHFINWTKTAFENVDVIPAGNGIMHQI NLEKMSPVVQVKNGVAFPDTCVGTDSHTPHVDSLGVISVGVGGLEAETVMLGRASMMRLP DIVGVELTGKRQPGITATDIVLALTEFLRKERVVGAFVEFFGEGARSLSIGDRATISNMT PEFGATAAMFAIDEQTIDYLKLTGREDAQVKLVETYAKTAGLWADDLKTAVYPRVLKFDL SSVTRNMAGPSNPHARFATVDLAAKGLAKPYEEPSDGLMPDGAVIIAAITSCTNTSNPRN VVAAALLARNANRFGLKRKPWVKTSFAPGSKVAEIYLKEAGLLPEMEKLGFGIVAFACTT CNGMSGALDPKIQQEIIDRDLYATAVLSGNRNFDGRIHPYAKQAFLASPPLVVAYAVAGS IRFDIENDVLGVSDDGREIRLKDIWPTDEEIDAVVAEYVKPQQFRDVYVPMFDTGKAQKA PSPLYDWRPMSTYIRRPPYWEGALAGERSLTGMRPLAILPDNITTDHISPSNAILAASAA GEYLAKMGLPEEDFNSYATHRGDHLTAQRATFANPKLFNEMVKNEDGSVRQGSLARVEPE GETMRMWEAIETYMNRKQPLIIIAGADYGQGSSRDWAAKGVRLAGVEAIAAEGFERIHRT NLIGMGALPLQFKPGTNRHTLQLDGTETYDVVGERKPRGDLTLVIHRKNGETVEVPVTCR LDTAEEVLVYEAGGVLQRFAQDFLEGNAA >gi|289656339|gb|ADEA01000028.1| GENE 18 20711 - 21865 2137 384 aa, chain - ## HITS:1 COG:NMA2054 KEGG:ns NR:ns ## COG: NMA2054 COG0372 # Protein_GI_number: 15794932 # Func_class: C Energy production and conversion # Function: Citrate synthase # Organism: Neisseria meningitidis Z2491 # 1 384 1 384 384 751 95.0 0 MTATTETPTFKPKKSVALSGVAAGNTALCTVGRTGNDLSYRGYDILDLAQKCEFEEVAYL LIHGHLPNKSELAAYKTKLKSMRGLPIRVIKVLESLPAHTHPMDVMRTGVSMLGCVHPER ESHPDSEARDIADKLIASLGSILLYWYQYSHNGKRIDVESKEDTIGGHFLHLLHGKRPTE SQVKAMHVSLILYAEHEFNASTFTARVIAGTGSDMYSCITGAIGALKGPKHGGANEVAYD IQKRYRNADEAEADIRERIARKEIVIGFGHPVYTISDPRNVVIKEVARGLSREAGDMRLF DIAERLESVMWEEKKMFPNLDWFSAVSYQKLGVPTAMFTPLFVISRSTGWAAHVLEQRKD GKIIRPSANYTGPEDLAFVEIEER >gi|289656339|gb|ADEA01000028.1| GENE 19 21947 - 22822 1145 291 aa, chain - ## HITS:1 COG:NMB0430 KEGG:ns NR:ns ## COG: NMB0430 COG2513 # Protein_GI_number: 15676342 # Func_class: G Carbohydrate transport and metabolism # Function: PEP phosphonomutase and related enzymes # Organism: Neisseria meningitidis MC58 # 1 291 2 292 292 541 96.0 1e-154 MSQLSAGTRFRQAVKESNPLAVVGCVNAYFARLATQSGFKAVYLSGGGVAACSCGIPDLG ITTMEDVLIDARRITDNVDTPLLVDIDVGWGGAFNIARTIRNFERAGVAAVHIEDQVAQK RCGHRPNKAIVSKDEMVDRIKAAVDARVDENFVIMARTDALAVEGLDAAIERAQACVEAG ADMIFPEAMTDLAMYRQFADAVKVPVLANITEFGATPLYTQRELADNGVSLVLYPLSSFR AASKAALNVYEAIMRDGTQAAVVDTMQTRAELYEHLNYHDFEQKLDKLFQK >gi|289656339|gb|ADEA01000028.1| GENE 20 23829 - 25148 2108 439 aa, chain - ## HITS:1 COG:NMA2056 KEGG:ns NR:ns ## COG: NMA2056 COG2252 # Protein_GI_number: 15794934 # Func_class: R General function prediction only # Function: Permeases # Organism: Neisseria meningitidis Z2491 # 10 438 8 436 436 646 88.0 0 MNTSNTNNGLLERFFNLSASGTNVRTELTAGLTTFLAMCYIIIVNPLILGETGMDMGAVF VATCIASAIGCFVMGFVGNYPIALAPGMGLNAYFTFAVVKGMGVPWQVALGAVFVSGIIF ILFSFFKVREMLVNALPMGLKMSIAAGIGLFLSLIALKGSGIIVASEATLVKLGDIHQPA ALLVLAGFAMVVALGHFRVKGAIILTILAITAISTLLGLSEFKGVVGEIPSIAPTFMQMD FNGLFTLSMVSVIFVFFLVDLFDSTGTLVGVSHRAGLLEDGKLPRLKRALFADSTAIVAG AALGTSSTTPYVESAAGVSAGGRTGLTAVTVGVLMLACLIFSPLVQSIPGFATAPALLYV GAQMLRSAREIDWDDMTEAAPAFLTIVFMPFTYSIADGIAFGFISYAVIKLLCNRVKDVP PMVWIVAVLWALKFWFMGG >gi|289656339|gb|ADEA01000028.1| GENE 21 25481 - 25648 85 55 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQVLTQHELEAVSGGGKHHHHHHHHHHGYYWGCYPAPAPIPVVVEYPRFYGFQVC >gi|289656339|gb|ADEA01000028.1| GENE 22 25997 - 26929 1326 310 aa, chain + ## HITS:1 COG:CAC2949 KEGG:ns NR:ns ## COG: CAC2949 COG0679 # Protein_GI_number: 15896202 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Clostridium acetobutylicum # 102 305 103 303 305 79 28.0 1e-14 METALLLAGKITELTLIVLMGIALVKSKLLTSEHSRTLSVIALYLISPSVMIHAFQIGNT PEILDGLKLSVALAVAFHILLIALGRLFKTLFKLDTLEHAATVYTNSGNLIIPLVMSVFG PQWVIYTSGFIIVQTLLFWTHLRLLLCGSGKLSWKTVLTNINILSILFGILLFACQIKLP RIIDNTLATVGGMIGPVAMLVAGMLIASLPLKEIVLSKRIYLTAFLRLILIPLILLLFVK ISGIAHLGGHSDTVVLISFLATVSPAASTVTQMAVIYGQNARKASAIYGITTLFCVITMP LMIGLYRLAV >gi|289656339|gb|ADEA01000028.1| GENE 23 27150 - 28385 1995 411 aa, chain + ## HITS:1 COG:NMA0183 KEGG:ns NR:ns ## COG: NMA0183 COG0786 # Protein_GI_number: 15793211 # Func_class: E Amino acid transport and metabolism # Function: Na+/glutamate symporter # Organism: Neisseria meningitidis Z2491 # 7 411 6 404 404 503 70.0 1e-142 MDTITVDPYYTLIIATVVLLVGRALVNKIKFLQNFNIPEPVAGGLLAAIIIYVLHVSTGM SFAFDKGLQDAFMLIFFSSIGLSADFSRLKAGGIGLVLFLVIVSVFIVIQNAVGVGLAAA LGLEPIIGLVTGSITLTGGHGTAGAWGKVLEEQYHIAGATDLGMASATFGLVLGGLIGGP VARKLVNKMGMKPIAETVQGDDTSDAVIDVFEHADQRRLITANSAVETMALFAACLAFSS LMVLPEVKAFFPEKFTLPQFVWALLFGVVLRNVLTSAFKINMFDRAIDVFGNASLSLFLG IALLNLKLWQLLDLALPMLVILAVQTLVMALYAYFATYRFMGKNYDAAVLAAGHCGFGLG ATPTAVANMQSVTERFGPSHKAFLIVPMVGAFFIDFVNAFILTGFANFLGG >gi|289656339|gb|ADEA01000028.1| GENE 24 28557 - 30875 2687 772 aa, chain + ## HITS:1 COG:RSp0362 KEGG:ns NR:ns ## COG: RSp0362 COG4258 # Protein_GI_number: 17548583 # Func_class: R General function prediction only # Function: Predicted exporter # Organism: Ralstonia solanacearum # 7 766 19 793 805 185 26.0 3e-46 MKHTLLRRLYTVLTALLAVFLVYTVSTQNWLQTDLTALLPSEQQPDALLTAADKAGEAQL NTQVVLLAGSKDTETAFQTASQIAGVWRKSGVFEQVDSSVTPDLDKVRADMRKLGLAMLP REEARLLYEQPQAYFQARAEAAANPFAAPSPLPLEQDWLGFGRFAAGKANPQSRLQWDMD NGMLFAEDNGKTWVFLRGRLAGGDNFSGNDALLPLMAQSRRIAADNGAETLTAGGALFAA VSKAAAEKESRLMSAAGLGLTFALLLWVFRSGRVFWLTLPLAAGMLTGLAAALLVFGEVH ILTIVIGTSLVGMLVDFPLHWLAPSVFGPSEKTVWQAEPAMKHVLPSFAVSLAITVLGYA LLWFTPLPVLRQTAVFSGFALFGAFGATVLWLPLLFRRYRARTVPFAALTERLHALSGRL KARLHKRGWLAVGGILLAVGLWRSDWRDDIRQWVNMPSEMLAEVQRIGQLSGADFGGKYL VAEAPSEDALLMKTAELGRALQPLVAQGKLGGFQSPDQLLMPVSEQQKLQNRLRELAKLP ESWQAMRDIGIPRKTVRDALLQAADAPPLTLSDGLNTDLAEAWRPLYLGEVEQGRFAAIV RISGMTDEAAVRAAAQSVSGVHWADKRAHLNKLFHHTRNQAAWLKLASYALAWFLLWRMF GIKRGSKILAVPLAAAVCTVAVLGWAGIPVSLFAMFGLLLVSAIGVDYAVYAVTAKHSAP ARLGGMLLAAATTAISFALLALSGTPAVAAFGITVTVGVAFNIWLAGTLLKD >gi|289656339|gb|ADEA01000028.1| GENE 25 30977 - 32218 1697 413 aa, chain + ## HITS:1 COG:RSp0354 KEGG:ns NR:ns ## COG: RSp0354 COG0644 # Protein_GI_number: 17548575 # Func_class: C Energy production and conversion # Function: Dehydrogenases (flavoproteins) # Organism: Ralstonia solanacearum # 7 403 15 410 419 380 51.0 1e-105 MSASQFDVAVIGAGPSGAVASALLNKRGFKVCVLEKQHFPRFVIGESLLPHCMEMLEEAG FADAVHAEPSFQFKNGAAFSWGSRYTEFDFTEKFSDGPGTVYQVRRGIFDKILIDEAAKQ GVEVRFGHGVTAFDNSGDFARLSVEADTGESYELTAKFVLDASGYGRVLPRLLDLETPSH LPPRQAHFTHIDDNITNPKFDRSKILITTHPQHRDVWIWLIPFGDNRCSIGVVGTPDVLA GESETVLKKFVYECPMLKEILDKAVWENDFPFRSIQGYSANVKSLHGKHFALLGNAAEFL DPVFSSGVTIALHSAKLAADLLAKQLEGGAADWDAEFAKPLMIGVNAFRTYVNGWYDFRF QNAIYAPNRSPEISRMISSILAGYAWDTANPFVAKSEQRLSALAALVGDVKVE >gi|289656339|gb|ADEA01000028.1| GENE 26 32519 - 33103 962 194 aa, chain + ## HITS:1 COG:BS_ywrO KEGG:ns NR:ns ## COG: BS_ywrO COG2249 # Protein_GI_number: 16080652 # Func_class: R General function prediction only # Function: Putative NADPH-quinone reductase (modulator of drug activity B) # Organism: Bacillus subtilis # 1 174 1 175 175 194 53.0 9e-50 MKILVNVFHPDLEKSAVNKAWVRQLEKTANVTVRKICQRYPDGKIDVPAEQEALSTHDRL VFQHPFYWYSVPPLMKQWIDEVFTYGWAYGGGDALAGKEWVCAISTGGPADSYQAGGYNS YSMSEFLKPLQQTANLVQTKFLPPFVFHGAVHATEAEIEQSARELAAHITDPLLDPQKKL AALVQAMNDEGVSL >gi|289656339|gb|ADEA01000028.1| GENE 27 33384 - 33914 804 176 aa, chain + ## HITS:1 COG:no KEGG:D11S_0529 NR:ns ## KEGG: D11S_0529 # Name: not_defined # Def: lipoprotein, putative # Organism: A.actinomycetemcomitans # Pathway: not_defined # 6 172 35 188 189 92 34.0 8e-18 MRFPTAALAALALAACAASPSLPRPQTLPTLDQAGLWFKLEQTDASGNAAQTSLLAVEQL SDGIRFVQTDALGAPVSRQFVGTKGWKNDGFIMPNSASRRLFAALLPLLAADRAAALYPE VEQKPSEHNAFCPDGNGALFRYKDRDLWCVARHDGQFVIAFPDKTRWTVSPIKEEQ >gi|289656339|gb|ADEA01000028.1| GENE 28 33914 - 35131 1463 405 aa, chain + ## HITS:1 COG:ECs4338 KEGG:ns NR:ns ## COG: ECs4338 COG0304 # Protein_GI_number: 15833592 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: 3-oxoacyl-(acyl-carrier-protein) synthase # Organism: Escherichia coli O157:H7 # 5 403 2 389 389 261 41.0 1e-69 MKTPVYLSRPAVTSSLGNGLRTHIDALLMPSETSPLTFSDQWVKGKTFAFGAVNETLRPL PDNLSAAHRSRNNQLLWHALEQIEDDIRAAVRRYGAARTAVIMGTSTSGADENIPLFQHV ADGGGWADKPFNQLQHEMASPSEFVAHVYGIHGLRYVVSTACTSGARALISAARLLRSGL CDAVVCGGVDTLSPLTINGFASLEVLSDGLANPFSANRDGINIGEAAAAFVMTRDADFGG TMQLLGYGASSDAYHMSSPRPDGLGAVQSFQAALNNAGLQPQDIGWINLHGTGTKHNDSM ESRAVAEVFGSQTFCTSTKPQTGHTLGAAGAIEAAFAWGIADRGCNPQGKLPPQQWDGIP DPELPAVALTDGNSAWPSEKRIAASSSFAFGGSNAVLVIGEAAEN >gi|289656339|gb|ADEA01000028.1| GENE 29 35588 - 36925 2144 445 aa, chain + ## HITS:1 COG:NMA1961 KEGG:ns NR:ns ## COG: NMA1961 COG0733 # Protein_GI_number: 15794844 # Func_class: R General function prediction only # Function: Na+-dependent transporters of the SNF family # Organism: Neisseria meningitidis Z2491 # 1 442 1 442 445 621 78.0 1e-178 MKTPASWSSKIGFILSAAGSAIGLGAIWKFPYTAGTNGGAVFFLLFLLFTILIALPVQLA EFYIGRKSGKNAVDAFKVLAPDTLWPWVGRMGVFACFILLSFYSVVGGWVLNYVVHAFDG SIRAGADFEALFGNTIASPVGSVAYQGLFMLMTVWVVKSGISSGIEKTNRYMMPALFILF LLLAGRSLTLPNAMAGVSFLLKPDWSHLSPQTMLTALGQAFFALSIGVSTMITYAAYLDR KQDLFRSGHSIMWMNLLVSLLAGLVIFPAVFAFGFEPSQGPGLIFVVLPAVFMKLPLGNL LFAVFMLLVVFATLTSAFSMLETVIAATIRENESKRSSRTWIIGTAIFIVGIPSALSFGV LGEMKLFGKTLFDLWDYMITALIMPIGALSVAVFVGWIQKKQAVLEHMREGSGVPQAVLS LWLYTLRFLAPVAIVLVFANTLGWI >gi|289656339|gb|ADEA01000028.1| GENE 30 37370 - 38032 932 220 aa, chain + ## HITS:1 COG:NMA0244 KEGG:ns NR:ns ## COG: NMA0244 COG1335 # Protein_GI_number: 15793262 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Neisseria meningitidis Z2491 # 3 204 2 204 211 95 35.0 7e-20 MTIIAIDIQPQYRFSCMAANEQRFLQRPESIVDGLNRQAEYADKRLLVENVSADQDALCN LCNNSMAEQGGFILNRSAYFGACANGCRSKFLLSGLPHPADYDHAVEIDGDYRHGVCFHD KKETRSTGLIEWLYAQNADTVILGGLATEDTVAATAKQLTWYNNDIRIIVNLSACCGYSP ESTIRTVYSLREMGISVVTDAKAIPALLDEIPSQLMFKVS >gi|289656339|gb|ADEA01000028.1| GENE 31 38435 - 40837 3074 800 aa, chain + ## HITS:1 COG:no KEGG:Asuc_0855 NR:ns ## KEGG: Asuc_0855 # Name: not_defined # Def: hypothetical protein # Organism: A.succinogenes # Pathway: not_defined # 24 799 22 799 799 475 34.0 1e-132 MKFTRSLPLWAVAFAVIPSVGHAASNVDAERERWVVHSRSGETERGEAVAALRRLYDGSG DKLVRADLIALLIRGGQQQEALAVCAACRPDGYSADELQNLAKAARDTKKFDTAALFYRE LQTRFPQQKTGLLGGALTAVDMARYSEAEVLIKEYRRRFGSDADIQTAENYLNKQTATLT GRLAGQLGSLGKSSDKETVLQAYRTAAEMQAYPMQERLLESYPQYFSENDRQWLKTGKAV SLLRSALATNNRAQLETAYRELNAVIAAAPENSAIYIAALRDRMTASNALEKHEETLADY RRLAKTGEQPDFVKAQYAHALLATGSPNQASAIFRGIADRQIAQSKRMSDDTNEQLIQAY AEAVRYSKAKLLIRNWNTAETALDFTRNAKIKNPLRDKAYFWNARLDAWNGRPGKAVKDM DAWLAEHPADPWALTLRGELAQWDGHDEEAREWFRRAKEYMPPDSQEWVDNKIAQSEMSS GNWKEAGQYAAAGADKPNFSGFRRQYIENRAPQLVANAQAMKTTSPADGTEWGQDATLYS KRSADGHRAYVTERSAYVPNHGSPLRAGRAGVGAQISLYPATVTVEAGHGFDLNRKAYAL ASADYRLTGRLKLKADAAYNSANTPVKALNQNVYAREYNLAAEYRHSSATQIGAGIGLMD FDDGNLRKSANVWMNNLLYQYDCWQLGSKLWADYSANKDIPEAHYYNPKNSKSLSGTLQL SYTAPLDNGISLKQTVSGGAGRYWQSGVAAENTWNLSYGHDWQFGRKTSLTYEFGRRQAM YDGQPEFQNFGNIGLNMKFN >gi|289656339|gb|ADEA01000028.1| GENE 32 40912 - 41487 1008 191 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298370030|ref|ZP_06981346.1| ## NR: gi|298370030|ref|ZP_06981346.1| salivary glue protein Sgs-4 [Neisseria sp. oral taxon 014 str. F0314] # 1 191 1 191 191 314 100.0 2e-84 MKKLIYTLLAGTALTAANAQQPPRIEIKLCNEQAIAKLMQKADKDTLYSAAQDCNDKGRS ATLLSAAAEKGHGQAALKLAEQKYADYYKFDAALWALQAKQAGEELPPHLVKLLADNPQI TLDMPMATPQIYNLSKHDLGTLSEKAEKGDGKAAQRLADYYMYAASSLPSAERQAKADYW RMHANNLLANK >gi|289656339|gb|ADEA01000028.1| GENE 33 41593 - 43437 2689 614 aa, chain + ## HITS:1 COG:RSp0287 KEGG:ns NR:ns ## COG: RSp0287 COG0726 # Protein_GI_number: 17548508 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Ralstonia solanacearum # 22 614 45 677 724 357 36.0 4e-98 MKKHLLLALLCTFGLQTAQAADPGHYGIICYHDIIDTSKPEDAGAVRRQYFPQTLTADRL IAHFNWLRDNGYTPVSWQQIKDARAGKAKLPDKPVLLTFDDGYLSFYTTAYPILKAFNYP AVYALITSWLEIPADGRIQYDDTTSLPRSAFVTWEQVREMQASGLIEIASHTHDLHHGIK GNPGGSQFAAVFPGRYQNGRYETPEEYRKRIYNDLKASRDTITRRTGIKPEVLVWPYGQF TLTSVDIARDVGFQSDLTLSDETLNPIGKQSVGRMLADQESSLERLQSYLSGKRFQLPHQ RAVYVKLDELYHPDPVQQDKNYNKLIQRMFLLGANAVYLQAVTDENKDGTADAAYFPNRH LPLKADLFSQVAWQIRTRSNAEVRAWMPMLAFDLGSGYEYLTDSRTGKPTARTVKRLSPF NAKNRKAINEIYEDLSFNSRFNGLAFGDDGFITEYEAPNHGSDAQETDALIGFSKELTES VLKYSFNGRDNMTTVRGILPEAVMPSEKPTPLAQNLAKFAQAYNQASVTAPAASEQQFSS LLQNLKATGIPAQKLIVNLQARQPDGSVLLDSDTLAARIMQARKDRFTGIAYSTDGFTGN QPDLKTVKPVFAIR >gi|289656339|gb|ADEA01000028.1| GENE 34 43573 - 44790 1825 405 aa, chain + ## HITS:1 COG:RSp0288 KEGG:ns NR:ns ## COG: RSp0288 COG1215 # Protein_GI_number: 17548509 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases, probably involved in cell wall biogenesis # Organism: Ralstonia solanacearum # 8 405 11 419 424 360 45.0 2e-99 MKWYEYSAAFVMLYPGVMSVYWTLSGLLYFLLWERRKGKPVFGGDAPMVSVLVPCFNEAD NLDASIPHLLRLTYPNYELIFINDGSKDDTLSILRRWEAESDKITALDQKNGGKASAMNH GASRARGKYIVGIDGDAVPDYGALEYIVETLEKRPDVGAITGNPRVRNRSTILGKLQVAE FSSIIGLIKRSQSLAGTLFTVSGVIMCIRKDVWRQIGGWSENMITDDIDISWKTQLHGYE IMYEPRALCWVLMPETIRGLYKQRLRWAQGGAEVILKYSREVWHLKNIRLWPLYFEYVVT LIWAYLLFAFFFVSIAQAIGGTVDLTPLKLGSLATFIAFLIQLSVSIYIDSRYEGKLLRY FISCIWYPYVFWMINSLTLVHGFPKALLRDKNRKATWTSPDRGIQ >gi|289656339|gb|ADEA01000028.1| GENE 35 44819 - 45130 422 103 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298370033|ref|ZP_06981349.1| ## NR: gi|298370033|ref|ZP_06981349.1| hypothetical protein HMPREF9016_01367 [Neisseria sp. oral taxon 014 str. F0314] # 1 103 1 103 103 149 100.0 6e-35 MYSIELRNQMVIHKAKKTSLTVSTKSTVSFVTVWGLWTLSFYLIAKDHHFLFNNPIVLHW TLWEILRAALAFVLIQLVILQAWSLYVRRVMRYRRKYRSGRGN >gi|289656339|gb|ADEA01000028.1| GENE 36 45282 - 47294 2976 670 aa, chain + ## HITS:1 COG:NMB1988 KEGG:ns NR:ns ## COG: NMB1988 COG1629 # Protein_GI_number: 15677816 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Neisseria meningitidis MC58 # 24 670 19 714 714 509 45.0 1e-144 MPSQTARPCHLSLSLLTLALFGSFAHAADTTAQTSELQPVTVKGANLSTHRITTQKIAES TDTDLKGLLFNEPSIGFGGGNGTSQWVNIRGLGQDQIDFKVDDSYSDTSTFHHQGRFLLD PELVKVVAVQKGSGSASAGIGASSGAIVAETIDPSDLLRPDQNFGFKVNAGVSSNKGWNR GLSLYGRAAGFDALVAGNWITEENYKAGKGYVNGGVSGGNRVPFSALGQRGLLAKIGYSI NEDNRIELSRSQEQTHGTRTLREEFDDFARNPASYRTYTQDRTNLEYKGANLGFVSNIKA NVFHLKTAREDAGSSADQNKATGANLNLDSRIFDRHTLKYGVNYRYQKNHPGTVTAAANE SKTDYGIYAEGIWDFHPVTLTTGLRYDHFKVNTTGHTSASDGNINPSLGLIYDVTDSLSL KASHSYATRSPRLYESMLAPSRNIVTAPNLKAERSRTTEIGFNYRPIQDLSLTGSYFWQK INNVHDFACLSGSCAGGRSTYTSGITQSTNNGYIKNKGYEFGANYRWRGLTARMGVAYSD PKHHYLFDSYDINTKAHAVGRTWTAGLAYRFDRPNLEIGWRGRFVQSRIGKPSRGATASE GTTEKRAGYGVNDIYANWKPTGKDDLNINFAVNNVGNKYYYSHSQRSSSRSGNSLPEVGR DFRLAVNYKF >gi|289656339|gb|ADEA01000028.1| GENE 37 47412 - 48968 2106 518 aa, chain - ## HITS:1 COG:NMB1485_2 KEGG:ns NR:ns ## COG: NMB1485_2 COG1253 # Protein_GI_number: 15677338 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Neisseria meningitidis MC58 # 243 518 1 276 276 465 90.0 1e-130 MDFSWLAEPHTWIGFATLFVLEVVLGIDNLVFVAILANKVKPDRRDRARVTGLGLAVLIR IIMLAFMAHIMTLTHPLFGIGGTAVSGKDIIMFAGGIFLLYKATTELHERLEGHNQFTVA ENQKKHARFWSVVAQILILDAVFSIDSVITAVAMVDHIVVAMAAVVVAMAVMITASKPLT EFVDKHPTVVMLCLGFLLMIGFSLIAEAFHFHIPKGYLYAAIGFSILIELFNQISQANSR KNDYISSSWRKRTAENVLGMMGIRESVLAKAGEEADDDEHFEENEKSMIRSVLTLAERPI MGVMIPRRDIERLDISQSREEQCGQLKNTPYSRLLVVGKAGVDEPLGYINKKDLLTQMLE TGSFNIQTALRQPLVLPDSTTALNAIELFRQSSADYALVVDEFGAVLGMVTMKDLLETIA GEFPEEFEREEEPALQENADESLTVDGSLEYVELAPQLNLPPQEEDADFHTVAGLIMEEL QSIPDVGDAVDFCGWRFEVIEKEGQRIGRVKISKLPEE >gi|289656339|gb|ADEA01000028.1| GENE 38 49205 - 49864 930 219 aa, chain - ## HITS:1 COG:NMA1419 KEGG:ns NR:ns ## COG: NMA1419 COG2197 # Protein_GI_number: 15794331 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Neisseria meningitidis Z2491 # 1 214 1 215 218 275 66.0 5e-74 MSGNIILIDDHTLFRRGIRSVLDEADYEVIGEAADGLSGVKLVEQLRPDLVLLDLDMPVM NGREALGQILSSNPEQKVVMLTVSEDGDELIECMKQGAHGFLLKNINADFFIEAVGKALN GDNVFSPEMTAHLVKSLISPIQPQSDAHIGTLTPRERETLHHLAIGHSNKVIAKKLNLAE STVKAYVQSILRKLGLSSRVQAAVYAIQHDIRPPEKDEE >gi|289656339|gb|ADEA01000028.1| GENE 39 49861 - 51759 2455 632 aa, chain - ## HITS:1 COG:RSp0979 KEGG:ns NR:ns ## COG: RSp0979 COG3850 # Protein_GI_number: 17549200 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase, nitrate/nitrite-specific # Organism: Ralstonia solanacearum # 4 629 3 634 637 415 40.0 1e-115 MLPKRLSSRLKFLTVLWLIVAVASIVLTLVLSWRLEGGAAAINDTGSLRMQTYRLSLLLE SGAPESEIAAYIGEFDKTLHDLDTGVPSRPLFLPNDQQVRQDMQRLVRTWRQRIKPQFQA VAAGRSSFQTASIPPFIDIIDTLTRSIEKVNNRYLNRLRMFQFILLALVLVSSMIVVVLL YTWIILPLGRLQKGVNAVHDGKLGVQVPTDELAEFAEVDKGFNQMSSRLHDLYQNLEQEV ADKTRDLAAKNYTLETLYAFSDLLSRSQSAAEAAEGFLDKMMDIVPADAGSIRLIDFQRR RMDLIAHRGLPDELQNAEACRRLEECSCGTAAQQSGQTVNFYKTVPSEHRVPEALCSRSG YHFLRVFKISSGGADLGLMTLYFKNESDNRTDVPLVESLCRQLGVTVSNFRLGTENRQLA VLQERNLIAQGLHDSIAQTLTFLNLQIQMLEKALEKSQRHTEPKVAEKLRFIKEGVQECY DDVRELLLNFRTKITHNEFNEAVGRLVLRFKQQTQIEAETRWLDDGPVLTSEQQLQFIFI LQESLSNIRKHARARRVTVTFHNRDDFKMEIEDDGCGFDTCGLNDFAENGHVGLNIMSER ARRIRAVLEIASEAGVGTKISLTLPKEERTLE >gi|289656339|gb|ADEA01000028.1| GENE 40 51985 - 53367 1815 460 aa, chain - ## HITS:1 COG:RSp0973 KEGG:ns NR:ns ## COG: RSp0973 COG2223 # Protein_GI_number: 17549194 # Func_class: P Inorganic ion transport and metabolism # Function: Nitrate/nitrite transporter # Organism: Ralstonia solanacearum # 2 460 3 461 461 533 66.0 1e-151 MSRLIQDWQPENPEFWQNGGRKTARRNLWISIPALMLAFAVWQVWSVAVIHLPRIGFNYS PNQLFWLAAVPALSGATFRAFYSFMVPVFGGRRWTAFSTASLLLPAVGLGMAIQNPDTSY GTMLLLALLCGLGGANFSSSMANISFFFPKAEKGTAMGLNAGLGNLGVSVAQFVVPLVIT AGLFGALGGGAQTWTEGGASKQIWLQNAGFVWVPFIIASSLAAWFGMNDLASAKAGFAEQ AVIFKRKHNWVMCFIYLGTFGSFLGFSAGFPLLIQTAFPAVNPVKYAFLGPLIGALTRPF GGWIADKTGSGAKITQWVFIGMIAAVFGVLSFLPSETQSGSFWGFFACFMILFALSGIGN GSTFMQIPVIFLTLHQRRVEQGLSDGKQALADAAKEGAAVAGFTGAFAAYGGFFIPKSYG TSIALTGSVNGALYGFILFYLCCLLLNWWYYARRNAEVRC >gi|289656339|gb|ADEA01000028.1| GENE 41 53461 - 54687 1925 408 aa, chain - ## HITS:1 COG:RSp0972 KEGG:ns NR:ns ## COG: RSp0972 COG2223 # Protein_GI_number: 17549193 # Func_class: P Inorganic ion transport and metabolism # Function: Nitrate/nitrite transporter # Organism: Ralstonia solanacearum # 7 403 20 417 437 480 65.0 1e-135 MASEKYKRYSVLISSTVSFTVCFMVWMMLAVVGIPVKEELGLTETQFSILAALPVLSGSL IRVPLGIWTDKYGGRIVMFVLMMVSVPAIFLMGYAYAYWHFLLIGLMMGLAGGTFSVGTP YVARWFPKEQQGLAMGVFGAGNAGSAVNKFLAPALIAYGTWHFVPTVYAAIMLGTALLFW FTSYHDPKHLVSSSVSLKEQLALLKDPGVLRYSQYYSVVFGGYVALALWMTHYYVDEYGL NLKTAALLAACFSLPGGVLRAFGGYLSDRFGAYRVTWAVMWVLWVCFFLLSYPQTDFIIH GKDGDISMHIGLNVVLFTVLMFTAGIAMAVGKASVFKFVADDYPHNIGAVSGVVGLAGGL GGFLLPIMFGMLVDLTGVRTTSFMLLYGTVCFSLVWMHFSFKAKAAHR >gi|289656339|gb|ADEA01000028.1| GENE 42 54791 - 55474 1138 227 aa, chain - ## HITS:1 COG:RSp0977 KEGG:ns NR:ns ## COG: RSp0977 COG2181 # Protein_GI_number: 17549198 # Func_class: C Energy production and conversion # Function: Nitrate reductase gamma subunit # Organism: Ralstonia solanacearum # 1 227 1 227 227 240 62.0 1e-63 MNTFNQFFFGIYPYICLAVFFLGSLMRFDREQYTWKSDSSELLYRGQLRLGSVLFHVGVL AVFFGHLFGLLTPLWFWEFIGVSHQAKQITAMTAGGIFGSAALAGLIILIRRRFKIERIS VNSTWRDKLVLVWLLITLLLGLSTIFVSMGHLDGEEMVKLMQWAQHIVTFRGGAASYLED VNFLFKMHIFMGMTFFFIFPFTRMVHVWSGFASVFYIGRAWQLVRRR >gi|289656339|gb|ADEA01000028.1| GENE 43 55491 - 56141 1219 216 aa, chain - ## HITS:1 COG:RSp0976 KEGG:ns NR:ns ## COG: RSp0976 COG2180 # Protein_GI_number: 17549197 # Func_class: C Energy production and conversion # Function: Nitrate reductase delta subunit # Organism: Ralstonia solanacearum # 5 213 4 216 226 187 53.0 2e-47 MAANPLVYKWLSALLCYPEADMLDALPEFQTALDEWPELAAERAGLQALLDHLKRHSLRE LQEDYVLVFDRNRRHALYIFEHVYGEDRDRGSAMVDLLEEYRRYGFELGDDELPDYLPAL LEFLSHVPPADAQELLGGAVHVIAHIAENLQSYGSPYAAVLKAAAALSPVAPQPLTEPPV RDMDEAMETFGPDWQGIEPLLKPSVQTVRFYPKGRH >gi|289656339|gb|ADEA01000028.1| GENE 44 56141 - 57709 2399 522 aa, chain - ## HITS:1 COG:RSp0975 KEGG:ns NR:ns ## COG: RSp0975 COG1140 # Protein_GI_number: 17549196 # Func_class: C Energy production and conversion # Function: Nitrate reductase beta subunit # Organism: Ralstonia solanacearum # 1 502 1 499 515 870 77.0 0 MKIRAQVGMVLNLDKCIGCHTCSVTCKNVWTSRDGVEYAWFNNVETKPGIGFPKNWEDQE KWNGGWVRKPNGKLVPKQGGRLKILSNIFANPNLPQIDDYYEPFTYDYEHLQNAPKMKTP PTARPVSVLTGKKMDKVEWGPNWEDDLAGEFEKRAKDTLFEGIQKEMMGAFEQTFMMYLP RLCEHCLNPTCVASCPSGSIYKREDDGIVLIDQDKCRGWRMCVSGCPYKKIYYNWVSGKA EKCIFCYPRIEAGEPTVCSETCVGRIRYLGVLLYDADKIEEAASVENPQDLYEAQLGVFL DPHDPEIQREALKQGISQSWLDAAKKSPVYKMAMEWKIAFPLHPEYRTLPMVWYIPPLSP IQSAIENGLVGENGIIPSVDEMRIPLRYLANLLTAGKIEPIKEALERMIAMRRFKRGQVV HGETLEQSLDGTGLTPEMVEDMYQIMAIANYEDRFVIPTSHKEMVENSFEDKASCGFSFG NGCSGGSDGLTQESLFGKRKASPIIFFDRRKDIEKNKEEGVR >gi|289656339|gb|ADEA01000028.1| GENE 45 57777 - 58121 626 114 aa, chain - ## HITS:1 COG:sll1163 KEGG:ns NR:ns ## COG: sll1163 COG1917 # Protein_GI_number: 16330416 # Func_class: S Function unknown # Function: Uncharacterized conserved protein, contains double-stranded beta-helix domain # Organism: Synechocystis # 20 113 38 132 135 64 30.0 5e-11 MKLPQIIRFADYLKENPAEAVRTVLYQDQHDNMVLWQIPPQTMLPAHRHPHGADIWIVLQ GEAELADDAQSGRIIRAGEAVVVGDRQIHGARNNGKEDCILVSVISPKAGFEKA >gi|289656339|gb|ADEA01000028.1| GENE 46 58190 - 61870 5479 1226 aa, chain - ## HITS:1 COG:RSp0974 KEGG:ns NR:ns ## COG: RSp0974 COG5013 # Protein_GI_number: 17549195 # Func_class: C Energy production and conversion # Function: Nitrate reductase alpha subunit # Organism: Ralstonia solanacearum # 1 1223 1 1234 1245 1842 69.0 0 MSHFLDRLTFFRHKHEPFANGHGVLTEEDRKWENAYRSRWSHDKIARSTHGVNCTGSCSW KIYVKNGIITWETQQTDYPRTRPDLPNHEPRGCPRGASYSWYVYSAQRIKYPMMRGALAE LWREARKTKDPIEAWQWIVEDPERSKSYKSQRGLGGFVRSNWDEAYEMVAAANCYTIKKY GPDRVIGFSPIPAMSMVSYASGARYLGLIGGVPLSFYDWYCDLPPASPQTWGEQTDVAES ADWYNSNYLLVWGSNIPMTRTPDAHFYTEVRYKGTKTVAVSSDFGEMAKFSDIWLSPRQG TDAALAMAMGHVILKEFHIDNPSDYFQDYCRRLTDMPVLVCLKEDGEGYRPEYTLRASQL SGNFGEEKNPDWKVLAWNEKTDSLMLPNGSIGFRWDGSGKWNLETKAQDDQNVQAALSLK TCADDVVRVGFDYFGGEFDEEKTFRKVPVKRITLADGSSRLVATVFDLLVAQYGVDNGLG DENVAKDYFDDKPYTPKWQEKHTGVAPERVIQVAREFAQNAHDTKGRSMIIVGAGLNHWY YLDMNYRGLINMLMMCGTIGKSGGGWCHYVGQEKLRPQSGWAPLTFALDWHRPARQMAGT SFFYGHTGQYRHETVSADELLTSDAGDDMRRLTMIDYNAKAARMGWTPSAPQLETNPLDI TDAAEKAGMAPVDYVVKGLKEGTLEMSCDDPENPKNWPRNMFIWRSNILGSSGKGHEYFL KYLLGTQNGLMSDEDDCLKPAEVKQREGVEGKLDLFTLLDFRMNTTCLYADVIFPTATWY EKHDLNTSDMHPFIHPFTEAVQPLWQSKSDWEIYKGLAKKFSELAKDYLGVRKDIVLTPL MHDSPQELGQPFDPKDWKLGECEPIPGKTMPAMTVVERDYGAVYEKFTSIGPLLEKVNNN GKGMAWDTKHEVEYLRKLNGVQPEGAGKGQPKIETAIDAAEMILTLAPETNGHVSKKAWQ SLGKITGRDHTHLINASEHTQIRFRDIVAQPRKIVTSPIWSGVESEEVCYTAGYTNVHEL IPWRTLTGRQQFYQDHKWMRDFGAAFCAYRPAVDTKTTKKLLGKMPNGNPEITLNFLTPH QKWGIHSTYSENLRMLTLSRGGPHVWISETDAKKAGLVDNDWVEVFNTNGSIACRVIVSQ RIPETMILMYHAQEKLVHTPAAETTKKRGGIHNSVTKAVLNPTHMIGGYAQLAYSFNYYG TVGSNRDEWVIVRKMKDIDWMDEPAE >gi|289656339|gb|ADEA01000028.1| GENE 47 62234 - 63136 1122 300 aa, chain - ## HITS:1 COG:NMA0588 KEGG:ns NR:ns ## COG: NMA0588 COG4973 # Protein_GI_number: 15793579 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinase XerC # Organism: Neisseria meningitidis Z2491 # 6 300 6 305 305 352 63.0 6e-97 MQQQDFYRYFDDYLTALRQEGKSAHTVEAYRRDLSQLERLLMLRPSENGADVRRGDFLAA LKKLSQRNLSERSMARKLSVWRQYCGWLVQRGLMAADPTANLKAPKPPQRLPKAVQQEPL NHLLNQGCGEDALALRDRAVFELLYGSGLRLSEVCGLNLHDVLPDEGWVGVTGKGGKQRR VPLVRKSIDALLDYLPHRVAAEGEAALFTNKNGRRLGQRQIQKRLQQWAAEQGSAQHLSP HMLRHSYASHLLQASRDIRAVQELLGHSNLSTTQIYTKLDLEHLAAVYDEAHPRAKRKKE >gi|289656339|gb|ADEA01000028.1| GENE 48 63140 - 63568 641 142 aa, chain - ## HITS:1 COG:no KEGG:Dbac_1354 NR:ns ## KEGG: Dbac_1354 # Name: not_defined # Def: esterase # Organism: D.baculatum # Pathway: not_defined # 1 142 1 142 143 149 52.0 3e-35 MPRINVPTPETILYTARIDVQIGDINYGGHLANDAVLRLCHETRVRWLAALGFTELDAGG AGLIMADAAVQYLAQAHHGDALQIEMGAEEAGKGGFVLLYHMVRVRDGKTVARVRTGMVC FDYAAQRVCRLPQALKTVLEAV >gi|289656339|gb|ADEA01000028.1| GENE 49 63811 - 64875 1899 354 aa, chain + ## HITS:1 COG:NMA0587 KEGG:ns NR:ns ## COG: NMA0587 COG0191 # Protein_GI_number: 15793578 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Neisseria meningitidis Z2491 # 1 353 1 353 354 685 95.0 0 MALVSMRQLLDHAAENGYGLPAFNVNNLEQMRAIMEAANQINAPVIVQASAGARKYAGAP FLRHLILAAVEEFPHIPVVMHQDHGASPDVCQCSIQLGFSSVMMDGSLLEDGKTPSTYEY NVNATRTVVNFSHACGVSVEGEIGVLGNLETGEAGEEDGVGAAGKLSHDQMLTSVEDAVR FVKDTGVDALAIAVGTSHGAYKFTRPPTGEVLRIDRIKEIHQALPNTHIVMHGSSSVPQE WLKVINEYGGNIGETYGVPVEEIVEGIKHGVRKVNIDTDLRLASTGAIRRFMAENPSEFD PRKYLGKTVEAMKQICLDRYLAFGCEGQASKIKPVSLEKMATRYAKGELNQIIN >gi|289656339|gb|ADEA01000028.1| GENE 50 65251 - 65499 199 82 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298370049|ref|ZP_06981365.1| ## NR: gi|298370049|ref|ZP_06981365.1| RNA-binding protein 33 [Neisseria sp. oral taxon 014 str. F0314] # 1 82 1 82 82 74 100.0 2e-12 MKHLTKLTSLMVLAAGLAAAPLASAEPGHVDGPHPEHQSPHMKKPVPRPPEARKHKAEPP MKKPFKHAAKKMPKHHHHHHGR >gi|289656339|gb|ADEA01000028.1| GENE 51 65751 - 65936 238 61 aa, chain - ## HITS:1 COG:NMB0330 KEGG:ns NR:ns ## COG: NMB0330 COG3024 # Protein_GI_number: 15676246 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 5 52 9 56 69 68 66.0 2e-12 MTEILIVECPNCRQPVAWIPENKYRPFCSERCKLIDLGEWADEKYTVAAQEEEPMSDWQK G >gi|289656339|gb|ADEA01000028.1| GENE 52 66035 - 66643 330 202 aa, chain - ## HITS:1 COG:NMA2157 KEGG:ns NR:ns ## COG: NMA2157 COG0237 # Protein_GI_number: 15795028 # Func_class: H Coenzyme transport and metabolism # Function: Dephospho-CoA kinase # Organism: Neisseria meningitidis Z2491 # 1 196 1 196 210 201 55.0 8e-52 MTVWIGLTGGIGSGKSLAAAEFVRLGVPHIDADAISRNLTADNGKALPAIRSTFGDEVFD TQGRLDREVLRDFVFRRPQSKEILEGLMFPLILEEIRFQQNQYPQAVYGIIDVPLLIENP QFLVLVGRVLVIDVAEEVQIRRVRQRSGLDESEIRRIIRTQISRRDRLLHADDVLVNEGS AGELAAKIGRLHRFYSHAVKTV >gi|289656339|gb|ADEA01000028.1| GENE 53 66645 - 67508 711 287 aa, chain - ## HITS:1 COG:NMA2156 KEGG:ns NR:ns ## COG: NMA2156 COG1989 # Protein_GI_number: 15795027 # Func_class: N Cell motility; O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, prepilin signal peptidase PulO and related peptidases # Organism: Neisseria meningitidis Z2491 # 2 283 1 282 286 394 70.0 1e-109 MLESLDTLVPFAVPLAAVLGLVIGSFLNVVIYRTPVMMERGWTQFAKEHLQLDLTEEERQ PFNLLKPDSRCPKCHAPVRAWQNIPIVSYLMLGGKCGSCKTPISIRYPLVELLTGILFAA VAWQYGWSWTALGGLILTAVLIALTFIDIDTQYLPDQLTLPLIWLGLLFNFDGAFVSLQS AVLGAVCGYMSLWLLNSFYRLVRGVQGMGAGDFKLLAALGAWLGVGTLPVLVFMSALVGL AGALIMRVARNQPFAFGPSLAIAGWVVFTANEPVNQLIRWWLTKSGF >gi|289656339|gb|ADEA01000028.1| GENE 54 67510 - 68751 1071 413 aa, chain - ## HITS:1 COG:NMA2155 KEGG:ns NR:ns ## COG: NMA2155 COG1459 # Protein_GI_number: 15795026 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulF # Organism: Neisseria meningitidis Z2491 # 10 413 9 410 410 558 70.0 1e-159 MAQAEQSKGLFANKNKGKRFTFEGRNLSTDQIVRGEVVAKDEEEARKKLQRRGIRPLRVS KVKSTRKKRITQEDITVFTRQLATMMKAGLPLMQAFEIVARGHSNPSMTQMLMQVRADVE QGSALGKSFSKYPKYFDRFYCNLVSAGETGGVLEGLLDKLAVYKEKTQAIKKKVKTALTY PIAIMVVAVALIFVMMMFVLPAFGEVYSSMGAELPGLTQIVMSMSKFFVKYGWVMIVAII LAGFGLYKLHQKSPAFQKRVDSIMLRLPIFGPIVRKATIARWSRTTATLFAAGVPLVEVL DSVAGAAGNILYEEATKDIQAKVTQGLSLTSSMQSTEMFPNMIIQMAAIGEESGSLDDML NKAAEFYEEEVDNSVSQLSSLMEPVIMVVLGSTIGVLLVAMYLPLFNLGNVVG >gi|289656339|gb|ADEA01000028.1| GENE 55 68833 - 70512 1547 559 aa, chain - ## HITS:1 COG:NMA2159 KEGG:ns NR:ns ## COG: NMA2159 COG2804 # Protein_GI_number: 15795030 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB # Organism: Neisseria meningitidis Z2491 # 1 559 1 558 558 906 79.0 0 MSVGLLRVLVQSQKITNSQAEHYNSALKANKEILPMLFSDGVITPKSLGELVARVFSYPL LDLRHYPRSNILTDVLSEEQMVQNRCIPIFRRGRKVYLAVSDPTQIQSFQKVAFASGASV DLVVVPDDQLSSLLEWLGQRSTSILKEISQEQEAAQPAQALYIDNEEAEDGPIPRFIHKT LSDALNAGASDIHFEFYEQMARVRFRVDGQLREVVQPPVAVRGQLASRIKVMARLDISEK RVPQDGRIQIAFHKHGRPIDFRVSTLPTLFGEKVVMRILNSDAASLNIDQLGFEPFQKEM LLEAIHRPYGMVLVTGPTGSGKTVTLYTSLNILNTEDVNISTAEDPAEINLPGINQVNVN DKQGLTFAAALKSFLRQDPDIIMVGEIRDLETADIAIKAAQTGHMVFSTLHTNNAPATLS RMLNMGVAPFNIASSVSLIIAQRLLRRLCPKCKTPMERPPEPALLKAGFTKEDLAKDWTM YRAVGCDSCRGKGYKGRAGVYEMMPVTEEMQRVIMNNGTEVDIMNMAYKEGMVDLRRAGL LKVMQGLTTLEEVTAHTND >gi|289656339|gb|ADEA01000028.1| GENE 56 71129 - 71689 502 186 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298370056|ref|ZP_06981372.1| ## NR: gi|298370056|ref|ZP_06981372.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 186 1 186 186 306 100.0 3e-82 MLYHFLKNMLDILRLRYKHPAEYTYPLPVILAVLLLLGMINAAAMSALFGKDAAAVVFSI LLTAAKWLILSRTMSAVLHYYGALRLPLQGFTLASEALNIPMLLVLYVPQLSPLGLLWQI WAFWTQAIGYIKMGNVAGWKVAVGYIAYFICTLIAGSALLMLFTHLGWMNEEMLRHQLQT ILQQQK >gi|289656339|gb|ADEA01000028.1| GENE 57 71825 - 73459 2071 544 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 [Haemophilus parasuis 29755] # 1 544 1 547 547 802 75 0.0 MAAKDVQFGNEVRQKMVNGVNTLANAVRVTLGPKGRNVVLDRSFGGPHITKDGVTVAKEI ELKDKFENMGAQMVKEVASKTNDVAGDGTTTATVLAQAIVAEGMKYVAAGMNPTDLKRGI DKAVAALVEELKNIAKPCDTSKEIAQVGSISANSDEQVGAIIAEAMEKVGKEGVITVEDG KSLENELDVVEGMQFDRGYLSPYFISDAEKQIAALDNPFVLLFDKKISNIRDLLPVLEQV AKASRPLLIIAEDVEGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLQDIAILTGGTV IAEEVGLSLEKATLEDLGQAKRIEIGKENTTIIDGFGDATQIEARVAEIRQQIETATSDY DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALL RARAALENLHTGNADQDAGVQIVLRAVESPLRQIVANAGGEPSVVVNKVLEGKGNYGYNA GSGEYGDMIEMGVLDPAKVTRSALQHAASIAGLMLTTDCMIAEISEEKPAMPDMGGMGGM GGMM >gi|289656339|gb|ADEA01000028.1| GENE 58 73567 - 73854 515 95 aa, chain - ## HITS:1 COG:NMB1973 KEGG:ns NR:ns ## COG: NMB1973 COG0234 # Protein_GI_number: 15677803 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Co-chaperonin GroES (HSP10) # Organism: Neisseria meningitidis MC58 # 1 95 1 95 96 158 98.0 3e-39 MTIRPLHDRVVVKRLEAEEKTASGIVLPGAAAEKPDMGEVIAVGAGKIGKDGNRRPLDVK VGDKIIFGKYSGQTVKADGEELLVMREEDIFGIVE >gi|289656339|gb|ADEA01000028.1| GENE 59 74071 - 74865 1040 264 aa, chain - ## HITS:1 COG:NMA1921 KEGG:ns NR:ns ## COG: NMA1921 COG0561 # Protein_GI_number: 15794806 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Neisseria meningitidis Z2491 # 1 263 7 269 269 282 55.0 4e-76 MQNPKIVFFDIDDTIYRKYTDTLRPSIGEAMRALKRRGILTAIATGRPPAAVPAKVRRLI DETGIDMLVTINGQYTEFRGKALQAYPMTETEMADMAAFFDSKGIAYAFVNNNEIAVSEA TEWAVETLQHILPEFLTDREYFRKKPVYQMLAFFQTARDAELADKIAAAGLKTVRWHQNA VDMLRADGSKACGIARAVAELGIDMKDVMAFGDGPNDVEMLQTVGFGVAMDSGDAAAKAV ADYICPSVDEDGVFQGLKTLGVIA >gi|289656339|gb|ADEA01000028.1| GENE 60 75050 - 76060 1054 336 aa, chain + ## HITS:1 COG:NMA0927 KEGG:ns NR:ns ## COG: NMA0927 COG0276 # Protein_GI_number: 15793886 # Func_class: H Coenzyme transport and metabolism # Function: Protoheme ferro-lyase (ferrochelatase) # Organism: Neisseria meningitidis Z2491 # 1 335 1 335 336 491 69.0 1e-138 MPHFASEPALPYSQQNQTAVLLLNLGTPDAPTTEAVRAFLKDFLSDPRVVELPRWLWQPI LRCAILPFRPKKSAHGYAKIWLDEGSPLALYTERLSQALADKLHGITVRHAMTYGKPAVS DVLSELKAQGVGKILAIPLYPQYAASSTGAALDKIFAALTQQRNQMSVRTVSRFYDDAGY IGAMKQHIQAYWAEHGRGEKLLLSFHGIPQKNHDDGDPYADECRRTAQLLAEALSLGEKD YIVSFQSRFGRSKWVEPSTQDLLENLPSQGVAKLDVFCPGFISDCLETLEEIALVGREQF HAAGGKQYQYIPCLNADAVWLEALADLARRNLAGWV >gi|289656339|gb|ADEA01000028.1| GENE 61 76119 - 76223 81 34 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKGMMKLATASLIGMSGITASVAGVVQNLTDASK >gi|289656339|gb|ADEA01000028.1| GENE 62 76282 - 76401 68 39 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKGPKMKEMMKLAASALIGMSGVAASATQVVQNMDAARQ >gi|289656339|gb|ADEA01000028.1| GENE 63 76469 - 76585 154 38 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKHLMKIAAASLIGMSGVGAAASSVVARNMADADKSKN >gi|289656339|gb|ADEA01000028.1| GENE 64 77140 - 77946 450 268 aa, chain - ## HITS:1 COG:PM1562 KEGG:ns NR:ns ## COG: PM1562 COG0463 # Protein_GI_number: 15603427 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Pasteurella multocida # 5 264 6 264 268 230 44.0 2e-60 MNPSLDVVIPCYNAVETLRAAAESALKQQKVRTVWLVDDASQDGTQEIMAELAAQYPTIR YEFLAENGGAAKARNWGALQSTADFVAFLDADDAYESDVLTAAYMALCNFYYLSLVRLKL RPVGFPDHYTRHAGFAEAWRRLEMTVGGNTVFRRSVLLACGGFPQDGLFRKFGGEDAALG IALTRSSVVGTLFGAEDAAVRHVYRRGIHAERLLDTAIFGMTPAGIDEKHQIEAEAVTQR ICANLAEVKANLSFGQTGIMDLQVSYDR >gi|289656339|gb|ADEA01000028.1| GENE 65 78055 - 78990 1472 311 aa, chain - ## HITS:1 COG:NMA0813 KEGG:ns NR:ns ## COG: NMA0813 COG0341 # Protein_GI_number: 15793786 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecF # Organism: Neisseria meningitidis Z2491 # 1 311 1 311 311 535 90.0 1e-152 MELFRIKRDIPFMSYGKLTTFISLVTFIAAVFFLVTKGLNFSVEFTGGTVMEVQYRQGAD VNKTREKLETLKMGDVQVQALGTNKHIMIRLPNKEGVTSAQLSNDVMNLLKQENPDVTLR QVEFIGPQVGDELVTNGLMALGMVVAGIIVYLSMRFEWRFAVSAIIANMHDIVIILGCFA LFQWEFSLTVLAGILAVLGYSVNESVVVFDRIRENFRKPAMRNHTVPQVIDNAITSTMSR TAITHGSTEAMVLSMLIFGGAALHGFSMALTIGIVFGIYSSVLVASPLLLMFGLNRENIA KQQKKKEEVVV >gi|289656339|gb|ADEA01000028.1| GENE 66 78994 - 80856 2298 620 aa, chain - ## HITS:1 COG:NMB0607 KEGG:ns NR:ns ## COG: NMB0607 COG0342 # Protein_GI_number: 15676511 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecD # Organism: Neisseria meningitidis MC58 # 1 616 2 617 618 1034 86.0 0 MNRYPLWKYLLIAFTVVLAVIYSLPNLFGETPAVQVSTNRQSIIINSQTEAKVAAALKAA NIPTDGMFVVDNSLKVRFKDAETQLKGRDVIENTLGEGYITALNLLADSPEWMAKINANP MFLGLDLRGGVHFTMQVDMKAAMQKTFERYSGDIRRELRRRKIRFGTIRQAENGLIVPFQ DASDVQKAIPELQKLFVEAKLEADGSNLILSLSEDAMQKVRSDAVKQNITTLHNRVNELG VAEPVIQQSGIDRIVVQLPGVQDTAKAKDIIGRTATLEVRMVEDDPAKVQAALGGNVPSG YELLYSAGENPAPTLVSKQVELTGDNINDAQPSFDEMGSPAVSINLDGSGGTIFGELTAA NVGKRMAMVLIDQGKSEVVTAPVIRSAITGGRVQISGSMTTAEANDTSLLLRAGSLAAPM EIVEERTIGPSLGKENIQKGFDSTLWGFAVVAVFMVVYYRMMGVFSTIALTANILFLIAI LSALQATLTLPGIAALALTLGMAIDSNVLINERIREELRAGVPPQQAINLGYQHAWSTIV DSNLTSLIAGIALLIFGSGPVRGFAVVHCLGIVTSMYSSVVVSRALVNLWYGRRRKLQTI SIGTVWKPETAASGQKAGKE >gi|289656339|gb|ADEA01000028.1| GENE 67 80928 - 81194 433 88 aa, chain - ## HITS:1 COG:NMB0606 KEGG:ns NR:ns ## COG: NMB0606 COG1862 # Protein_GI_number: 15676510 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YajC # Organism: Neisseria meningitidis MC58 # 7 88 5 88 88 118 80.0 2e-27 MEQGSMLTQFAPLILIMVVFYFLIMRPQQKKFKAHQAMLADLKVGDKVLLTAGFKGKITK VGEQFFTVEIGRGVDVEVERNAIAAKTE >gi|289656339|gb|ADEA01000028.1| GENE 68 81382 - 82491 718 369 aa, chain + ## HITS:1 COG:NMA0810 KEGG:ns NR:ns ## COG: NMA0810 COG0123 # Protein_GI_number: 15793783 # Func_class: B Chromatin structure and dynamics; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Deacetylases, including yeast histone deacetylase and acetoin utilization protein # Organism: Neisseria meningitidis Z2491 # 1 342 19 359 385 487 69.0 1e-137 MKNLIRRLRIILRRILGVRARTVWISHPIFLRHEPGGTHPESPQRITAILEELKRRKIWR RLQAAEAEEVSDAQLALVHPRRYLRFLESVQPQEGKIYRLDDDTVISNRSLEAARFAAGA VIKAVNMVMDKKACHAFCAVRPPGHHAQSSQAGGFCLLNNVAVGAMHAIAEYRLQRIAII DFDVHYGDGTAEIFKDDPRILFFNAFETDLFPFPDLDNGITGSANMLHTPFAAGTDSPTF RDTIRKQWLPRLAAFKPELVLLCAGFDAHRDDETGRLKLHEADFAWLTHKIVQTASSCKG KIVSALEGGYTLDSLAKSAAEHIHVLAGMKKSDAAVQYDHFLKNDGRKKILNKLSMRPSE KTGNTSKSP >gi|289656339|gb|ADEA01000028.1| GENE 69 82708 - 83772 1907 354 aa, chain + ## HITS:1 COG:NMB0604 KEGG:ns NR:ns ## COG: NMB0604 COG1063 # Protein_GI_number: 15676508 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Neisseria meningitidis MC58 # 1 354 1 354 354 667 98.0 0 MKAARFYDKGDIRIEDIPEPTVAPGTVGINVAWCGICGTDLHEFMEGPIFIPPCGHPHPI SGESAPVTMGHEFSGVVYAVGEGVDDIKVGQHVVVEPYIIRDDVPTGEGSNYHLSKDMNF IGLGGCGGGLSEKIAVKRRWVHPISDKIPLDQAALIEPLSVGHHAYVRSGAKEGDVALVG GAGPIGLLLAAVLKAKGIKVIITELSKARKDKARESGVADYILDPSEVDVVEEVKKLTNG EGVDVAFECTSVNKVMDTLVEACKPAANLVIVSIWSHPATINVHSVVMKELDVRGTIAYC NDHAETIKLVEEGKINLEPFITQRIKLDELVSEGFERLIHNNESAVKIIVNPNL >gi|289656339|gb|ADEA01000028.1| GENE 70 83891 - 85030 1538 379 aa, chain + ## HITS:1 COG:BS_yqiG KEGG:ns NR:ns ## COG: BS_yqiG COG1902 # Protein_GI_number: 16079477 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Bacillus subtilis # 1 367 1 369 372 353 47.0 3e-97 MNPKYAPLFQPFTLNNGVTVKNRLAVAPMTHFGSHADGSISDQERAFIGNRAGDMGLFIA AATLVQDGGKAFPGQPEATGEHCLDSLKETAQLIQKQGAKAILQIHHGGYKAMTELNRRD KISASANEAEGAREASAAEVDELVASFARAADLALRAGFDGVEIHGANSYLIQQFYSAQS NRRSDKWGGSLENRMRFPLAVVDAIAAVRDKHQRNDFIIGYRFSPEEAGEDGLTMTETGA LIDALVQKPLQYLHVSLWEFDKKIRRGGDTAQTRMQFIHERINGKLPLIGVGNLFTADQI LAAYETGWAEFIALGKTVMLNPHIATQILEGREAEIETQLDTTRADHYGFPDTLWKLAAS GTQSWLPPVKGTDWKPMDI >gi|289656339|gb|ADEA01000028.1| GENE 71 85096 - 85617 487 173 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298370069|ref|ZP_06981385.1| ## NR: gi|298370069|ref|ZP_06981385.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 173 8 180 180 298 100.0 6e-80 MDDNELERAENLLIETAEVMAQFKQNGENIVRNIESKLDKSLGEQRKMITEMVRSEVTRE LSVSMKGYVKDMEGARNQMLEQVQEFNAYLHKVNEENKKISSRVVLIVSITLAALVIGGI ALLFFFSKMVEQKRLDADMIGRINRANVVRCGDELCAKTGRNFGGGYRVIQQR >gi|289656339|gb|ADEA01000028.1| GENE 72 85647 - 86465 197 272 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298370070|ref|ZP_06981386.1| ## NR: gi|298370070|ref|ZP_06981386.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 272 9 280 280 503 100.0 1e-141 MTEKKIVTLVETKGTERTYQMNDGSIEKRTGGTVAWRNNNPGNLKFEYANSADHTVRTSR TKEKALSAAQSKYEGVVALDQWGNAIFEDMDAGRAAKIKLLTDRFSNLNVHNMIREYSKP DYSGKTHWDSQEKTIYNVARQQGVDLQDKKIGDMTSKELSALADGISKFEGWKEGIVTVI PDLKKEINDNNEMTKPINPNPNKSDRLRALIQGFKNDTDGSFAAQVLAENSDVVENFRER QQERLEQVRQRGAVQDIQPEIHQERSFGGRSF >gi|289656339|gb|ADEA01000028.1| GENE 73 86498 - 87097 207 199 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298370071|ref|ZP_06981387.1| ## NR: gi|298370071|ref|ZP_06981387.1| hypothetical protein HMPREF9016_01405 [Neisseria sp. oral taxon 014 str. F0314] # 1 199 14 212 212 381 100.0 1e-104 MLVTATSYSSEQSIPREVSKFLDNESRVLSYKTGDLNKDGRQDAVVVIESIADDQEYGHA RTLLVFLRNKKNILEQVVKNNNIIACSKCSNYEPYPDPLSNGEIALGKGMITITQYFDIR FNPSFSIYKFKYQPKTHKFKTIVARNIVFKLKQPEGEYRKYISNHVAQYGKSLDDFNPDW HNLKKILDEDYDTNQKKVN >gi|289656339|gb|ADEA01000028.1| GENE 74 87427 - 89022 2313 531 aa, chain + ## HITS:1 COG:NMB0626 KEGG:ns NR:ns ## COG: NMB0626 COG4108 # Protein_GI_number: 15676528 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptide chain release factor RF-3 # Organism: Neisseria meningitidis MC58 # 1 531 1 531 531 1082 99.0 0 MSQEILDQVRRRRTFAIISHPDAGKTTLTEKLLLFSGAIQSAGTVKGKKTGKFATSDWME IEKQRGISVASSVMQFDYKDHTVNLLDTPGHQDFSEDTYRVLTAVDSALMVIDAAKGVEA QTIKLLNVCRLRNTPIVTFMNKYDREVRDSLELLDEVENILKIRCAPVTWPIGMGKNFKG VYHILNDEIYLFEAGGERLPHEFDIIKGIDNPELEQRFPLEIQQLRDEIELVQAASNEFN LDEFLAGELTPVFFGSAINNFGIQEILNSLIDWAPAPKPRDATVRMVEPDEPKFSGFIFK IQANMDPKHRDRIAFLRVCSGKFERGMKMKHLRINREIAASSVVTFMSHDRELVEEAYAG DIIGIPNHGNIQIGDSFSEGEQLAFTGIPFFAPELFRSVRIKNPLKIKQLQKGLQQLGEE GAVQVFKPMSGADLILGAVGVLQFEVVTSRLANEYGVEAVFDNASIWSARWVSCEDKKKL AEFEKANAGNLAIDAGGNLAYLAPNRVNLGLTQERWPDIVFHETREHSVKL >gi|289656339|gb|ADEA01000028.1| GENE 75 89070 - 89840 930 256 aa, chain - ## HITS:1 COG:RSc3337 KEGG:ns NR:ns ## COG: RSc3337 COG0730 # Protein_GI_number: 17548054 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Ralstonia solanacearum # 7 253 3 248 252 179 44.0 4e-45 MLADSFFYYLLLIGFAAGLMDAAVGGGGLLQIPGLFNLLPNATPVASVMGINKFASCCGT LTATGQYLRRISVPWKMLLPAAVLAFAASYLGANAVAYFPVQYMKSAMLVIMIAMCLYTF LKKDLGQAVRTEKLTRRETWWGLFFGALIGFYDGIFGPGTGSLLAFVFVRFYGYDFLTAN AAGKVINSTTNLAALTFFIPQGHVVWAWAVPLALANLCGGVVGARLAIRGGTRFLRYGFM LLLCLTIGKFAWDLLS >gi|289656339|gb|ADEA01000028.1| GENE 76 90024 - 90230 115 68 aa, chain + ## HITS:1 COG:RSc1954 KEGG:ns NR:ns ## COG: RSc1954 COG2862 # Protein_GI_number: 17546673 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Ralstonia solanacearum # 19 60 16 57 179 57 61.0 6e-09 MEHRTQKLRAHGHFRPHCFRGRWLQRPIYLGQIAAQAIYTYKFLKMLWHLVSNLGIMDET PSCLPYSI >gi|289656339|gb|ADEA01000028.1| GENE 77 90372 - 90488 84 38 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298370074|ref|ZP_06981390.1| ## NR: gi|298370074|ref|ZP_06981390.1| hypothetical protein HMPREF9016_01409 [Neisseria sp. oral taxon 014 str. F0314] # 1 38 1 38 38 63 100.0 3e-09 MWQYIIHLLSDFCFLISAIAMTLPDKIVYRYSTTHKAH >gi|289656339|gb|ADEA01000028.1| GENE 78 90676 - 91194 905 172 aa, chain - ## HITS:1 COG:NMA1930 KEGG:ns NR:ns ## COG: NMA1930 COG3009 # Protein_GI_number: 15794813 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 168 1 168 172 214 66.0 6e-56 MRLFPIAAALTLAACGTTQSPQYFVLPDSQYIRPAAQGSEIAVKVNLAEPLASGGLVYQT DAYHVNLAKNHLWAAPLDGALAANLSNKLNRLNPRHTFVPASRSQSGQTLKIYIEAFQGS YQGQTTVSGYALWPDGRSKPFDITTPQQGDGYTAMLESLENGLGKVAQAVAY >gi|289656339|gb|ADEA01000028.1| GENE 79 91194 - 92855 1857 553 aa, chain - ## HITS:1 COG:NMA1929 KEGG:ns NR:ns ## COG: NMA1929 COG3008 # Protein_GI_number: 15794812 # Func_class: R General function prediction only # Function: Paraquat-inducible protein B # Organism: Neisseria meningitidis Z2491 # 11 553 11 553 553 949 90.0 0 MKKHDSSQTHHAPARVKKTNVFTSVVWLIPLIALLAGGWLLVKDIRNRGPVVTLLMDSAE GIEVNNTVIKVLNVDVGRVTRIKLRDDQKGVEVTAQLNADAKDLIRSDTQFWVVKPRIDQ SGVTGLSTLLSGSYIAFTPGKSNETKDVFEVQDIPPIAAIGQSGLRLKLVGQNDKILNVS SPVLYENFMVGQVESARFEPSDQTVHYTIFIQSPNDKLINSASRFWLESGINIETTGSGV KLNSAPLPALLSGAISFDSPKTKDSKNVKSEDSFTLYNSRSEVANLPDDRSLYYTAFFKQ SVRGLTAGSPVEYKGLNVGVVSDVPYFDRNDSLRLFENGWIPVRIRIEPSRMEINADEQS KEHWKQQFQAALGKGLTATISSNNLLTGSKMVELTDQPSSSPKLRPHTVYAGDTVIATRG GGLDDLQAKVADLLEKFNNLPLDKTVTGLNGSLAELKSTLKSANAALSSIDKLVGKPQTQ NIPNELNQTLKELRQTLQGVSPQSPIYGDVQNTLQSLDRTLRDVQPVINTLKEKPNALIF NSSSKDPIPKGSR >gi|289656339|gb|ADEA01000028.1| GENE 80 92852 - 94165 937 437 aa, chain - ## HITS:1 COG:NMA1928 KEGG:ns NR:ns ## COG: NMA1928 COG2995 # Protein_GI_number: 15794811 # Func_class: S Function unknown # Function: Uncharacterized paraquat-inducible protein A # Organism: Neisseria meningitidis Z2491 # 20 437 18 433 434 586 71.0 1e-167 MMKPVRIYHRWWRYKSYLPDATLPAHTVECPDCGCRMDIPTLRQGQEAHCPVCNHEVVEV ENNPYIVPLAYALTSLILMAFAYSMVYVRVDLFGVTSILSLPQMMRLLISLDYGFLAEVM FVLTFGAPLLFLLLCLYVYTALVRERAYPALRFATRILVRMRHWIMVDVFFISTLVAYIK LSSVAVVEFGSAFYLMFPLSVMLIRTSVSIPQHWVYYKIHRLTGGHAVQTASEDKICCSR CLYFRDKDEHPCGVCGADLYRRRPKSLNISLAFLLAALILYFPANILPIMISSNPTALEI NTIFNGIVYMWNDGDRMIAVIIFSASIMVPVLKIIAMAVLIASAYFKPPMSAAKMSVLYR ITESIGRWSMIDIFVIIILMSAFHTNMARVVPGGAAVYFCLVVILTMLSAYYFDPRLIWD RQQQLSDGLDSSDTRKQ >gi|289656339|gb|ADEA01000028.1| GENE 81 94367 - 95518 707 383 aa, chain - ## HITS:1 COG:NMB2039 KEGG:ns NR:ns ## COG: NMB2039 COG3203 # Protein_GI_number: 15677862 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Neisseria meningitidis MC58 # 1 383 1 331 331 304 48.0 2e-82 MKKSLIALSLAALPVAAMADVTLYGQIKAGVEVGQTKVKVNGVEAKSATTTKIADFGSRI GFKGHEHVGSDLNAIWQVESKTSVAGTDAGWGTREAFVGLEGGFGKVRAGKINTQLKDMD KIDPWEYSSNALGLGVFTRTGERAVSVRYDSPVFAGFSANVQYTPRDNQDNTGRNEKGVT NYRNDTSKYYAGLNYENSGFFAQYGGAYQKSAYVGDNNKNKSGQVHQVQAGYDANNLFVG LGYQYTNGWDTLDSYRAAFADGVTPYVAGRDAAGNPIYATRDYDAANDTSTRIKTHELAV TGAYRFGNVTPRVSYAHGFKAKGKGLSSQDKTSTEYNQVVLGADYDFSKRTTAMVSAGWL KAGKRHDNKVETTAGLVGLRHKF >gi|289656339|gb|ADEA01000028.1| GENE 82 96121 - 96264 130 47 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQKGIAMYIKVQPFSPPTNLCTIYGFNWRFRLAFGSTKTRKIMFSNQ >gi|289656339|gb|ADEA01000028.1| GENE 83 96878 - 99229 1716 783 aa, chain - ## HITS:1 COG:NMB0341 KEGG:ns NR:ns ## COG: NMB0341 COG3170 # Protein_GI_number: 15676256 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein FimV # Organism: Neisseria meningitidis MC58 # 1 552 41 523 875 169 34.0 2e-41 MKLIAASVALMTSFSAVAGLGGLNVQSNLGEPFSGSITVTGDEAKALLNGGKATVSNGNL RTSVRKSGDKAIISIRSSQPIQDPVLIFQVGAGSQSREYTAIIDPADYASKPDGSSRARI NNNNQTTKVEPASAPKSQNVDREAARERISRIVNSEEAEYQEPVQATKPKITGRQTQIAN EKEYSNISYGKRHLVLNGETLLGISARIRPQGMSVAETMRALVNANPTVFIENNADRMLA GKVLNIPARDEMKRLAAQPPAIKVPAENAAQALDQAQQNAQKQQQVEQPAVAAPSGAKPA SDAQAKDKNIQETVPETVKPIENEVRAASEAVSPASDVDAGAASAVERLPKQAVEQQEQV RPSEENIPSEEGGLWRWLLIGGASLVVLLLLAKLLAGRKAGEQKIVVPVAKQHSDEDEED EEGFSFSNVKSSLEGQKFAAETKSTEETEEIESPKTKPEVHVGFDEKGTSKEPSTEEGLA IEDDFDDDIFFTQATEENVADKDDVKVDWNSVEAVQSGIVSSAVTTDEETEKRRNADWDT IESTESVYEPDTEPSFISSNQPSVIKQESHSSVTDSVKEEVEVKEDEVLDFFAVNEAEEN KEENLPLSQEIHQEREKDLDNINENKESASSEPLDFEIPSPEEDKESNKAIEEPSLETEE ITFEEKHDSDSSEVFAVRQDRGLSFQDSTDFDEQPLQIDETDGNVDWEDIAVEDVDGASN ENSSFISESVGMTAPFEAKYELAKMYVEIGDPAAARETLQELLEESQGAILDKAKEMLKE LDS >gi|289656339|gb|ADEA01000028.1| GENE 84 99517 - 100053 639 178 aa, chain + ## HITS:1 COG:NMA2145 KEGG:ns NR:ns ## COG: NMA2145 COG2917 # Protein_GI_number: 15795016 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Intracellular septation protein A # Organism: Neisseria meningitidis Z2491 # 1 177 1 176 176 196 66.0 2e-50 MKILSDLLAVILFFITYTVTKNIIWATAVALAAGVVQAVFTYIKNKKLETMQWVSLILIV VLGGATILLKDQRFIMWKPTALFWFGALALAVGQIMGKNSLKSLMGKELELPDLVWRKLT FAWIGYLLFMGIANIIVFKNFTEAQWVSYKLFGSTALMIVFVIGQGLYLSRYLPRENN >gi|289656339|gb|ADEA01000028.1| GENE 85 100053 - 100343 436 96 aa, chain + ## HITS:1 COG:NMA2144 KEGG:ns NR:ns ## COG: NMA2144 COG2350 # Protein_GI_number: 15795015 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 96 1 96 96 150 80.0 6e-37 MEYYMLLATDADDVHEARMAARPAHLKRLEALKAEGRLLTAGPNPLPDNPERVSGSLIIA QFESLDAAQQWAEQDPYVDAGVYEELLIKPFKAVFK >gi|289656339|gb|ADEA01000028.1| GENE 86 100343 - 100612 167 89 aa, chain + ## HITS:1 COG:NMA2143 KEGG:ns NR:ns ## COG: NMA2143 COG0271 # Protein_GI_number: 15795014 # Func_class: T Signal transduction mechanisms # Function: Stress-induced morphogen (activity unknown) # Organism: Neisseria meningitidis Z2491 # 7 89 7 89 92 108 62.0 2e-24 MDMKQSIASRLKTLEPRIFEFQDDSHLHVGHAGNRGGGHYSILVVSTLFRDTPRLERQRT VKGLLQDLFSDGLIHALSIKALTPEEYFN >gi|289656339|gb|ADEA01000028.1| GENE 87 100634 - 101506 1307 290 aa, chain + ## HITS:1 COG:NMA2142 KEGG:ns NR:ns ## COG: NMA2142 COG0760 # Protein_GI_number: 15795013 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Neisseria meningitidis Z2491 # 3 290 2 288 288 292 56.0 6e-79 MKKSHIISALVLAALSGTLSAKTLVTVNGTAIDSSTIDDQVKVIRSQNKQVQDSPALRKS LTERQIIATVVSQEAKRLKLDQSAEFKKAAEQSRTAATKQGADKKPTFKTEWAVFEKDLL GQAFAMHIAKQNPVQEKDIKTAYNDFSKFYKGTQEVQLGQIAARSNEDAQKAIKDLEAKK SFANVLKQYSVDEQAKKAGGIARGYVPLKDLEQSAPPLYAAIKDLKKGGFTSAPLPNGNV YSVFYINDRRDIKVPSYEEMKNEIGSELQASRIDAAIGALMQKADIKPAQ >gi|289656339|gb|ADEA01000028.1| GENE 88 101626 - 102087 591 153 aa, chain + ## HITS:1 COG:NMA2140 KEGG:ns NR:ns ## COG: NMA2140 COG1490 # Protein_GI_number: 15795011 # Func_class: J Translation, ribosomal structure and biogenesis # Function: D-Tyr-tRNAtyr deacylase # Organism: Neisseria meningitidis Z2491 # 1 149 1 149 163 221 72.0 3e-58 MRAVIQKVTHAEVDVINADSRETCGRIDSGFVVLLGVTHRDTETDAKYIADKTANLRIFE DETGKLNLSLKDTGGTVLLVSQFTLYADARNGRRPSCSDAAPAAQADELYRLVADLLRAH GLHVETGRFQTHMQINLCNDGPVTLLLDSQKLF >gi|289656339|gb|ADEA01000028.1| GENE 89 102247 - 102339 59 30 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKLTLNEPQIYLRLQYKHILKAQAYFTLN >gi|289656339|gb|ADEA01000028.1| GENE 90 102554 - 104230 2544 558 aa, chain - ## HITS:1 COG:NMB0387 KEGG:ns NR:ns ## COG: NMB0387 COG0488 # Protein_GI_number: 15676301 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Neisseria meningitidis MC58 # 1 558 1 558 558 1077 99.0 0 MSQQYVYSMLRVSKVVPPQKTIIKDISLSFFPGAKIGLLGLNGAGKSTVLRIMAGVDKEF EGEAVPMGGIKIGYLPQEPELDPEKTVREEVESGLGEVAAAQKRLEEVYAEYANPDADFD ALAEEQGRLEAIIAAGSSTGGGTEHELEIAADALRLPEWDAKIGNLSGGEKRRVALCKLL LSKPDMLLLDEPTNHLDAESVEWLEQFLVRFPGTVVAVTHDRYFLDNAAEWILELDRGHG IPWKGNYSSWLEQKEKRLENEAKSEAARVKAMKQELEWVRQNAKGRQAKSKARLARFEEM SNYEYQKRNETQEIFIPVAERLGNEVIEFVNVSKSFGDKVLIDDLSFKVPAGAIVGIIGP NGAGKSTLFKMIAGKEQPDSGEVKIGQTVKMSLIDQSREGLQNDKTVFDNIAEGRDILQV GQFEIPARQYLGRFNFKGSDQSKIAGQLSGGERGRLHLAKTLLSGGNVLLLDEPSNDLDV ETLRALEDALLEFAGSVMVISHDRWFLDRIATHILACEGDSKWVFFDGNYQEYEADKKRR LGEEGAKPKRIKYKPVTR >gi|289656339|gb|ADEA01000028.1| GENE 91 104408 - 105463 1813 351 aa, chain - ## HITS:1 COG:NMB0351 KEGG:ns NR:ns ## COG: NMB0351 COG0176 # Protein_GI_number: 15676266 # Func_class: G Carbohydrate transport and metabolism # Function: Transaldolase # Organism: Neisseria meningitidis MC58 # 1 351 1 351 351 531 84.0 1e-151 MTILSDVKALGQQIWLDNLSRSLVQSGELAEMLKQGVCGVTSNPAIFQKAFAGDPLYADE VAALKQKNLTPKQRYETMAIADVQAACDVCLSEHESTGGKTGFVSLEVAPELSQNAAGTV EEAKRLRAAINRKNVMIKVPTTDAGVEALEALVAEGISINLTLLFSRAQTLKAYAAYTRG IAKRVAAGLPVDQIHVVASFFISRVDSALDATLPDHLKGKIAIALAKAAYQDWEEYFGGA EFAPLAAKGANRVQLLWASTGVKNPAYPDTLYVDSLIGANTVDTVPDATLKAFIDHGTAK ATLGEGAAEAKAQLAEAEKLGVDLEALATRLQEDGLKQFEEAFAKLLAPLA >gi|289656339|gb|ADEA01000028.1| GENE 92 105565 - 106539 1400 324 aa, chain + ## HITS:1 COG:NMA2135_1 KEGG:ns NR:ns ## COG: NMA2135_1 COG0794 # Protein_GI_number: 15795006 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted sugar phosphate isomerase involved in capsule formation # Organism: Neisseria meningitidis Z2491 # 1 206 1 206 207 328 87.0 1e-89 MGNTEQYLDWARRVLRTEALGLNEIADALDGGFVRAADALLHCKGRVVITGMGKSGHVGR KIAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEITAIMPALKRKNVT LIGITARPASTLARHADIHITAAVSKEACPLGLAPTTSTTAVMALGDALAVVLLRARAFT PDDFALSHPAGSLGKRLLLRVADIMHGGDALPAVVSGTLLKEAIVRMSEKGLGMLAVTDE AGRLKGVLTDGDLRRLFQQRDNFAGLTVDDIMHTSPKTITADKLATEALKHMQANHINGL LVTEADGTLTGALNMHDLLMARIV >gi|289656339|gb|ADEA01000028.1| GENE 93 106710 - 107282 826 190 aa, chain - ## HITS:1 COG:NMA1931 KEGG:ns NR:ns ## COG: NMA1931 COG2818 # Protein_GI_number: 15794814 # Func_class: L Replication, recombination and repair # Function: 3-methyladenine DNA glycosylase # Organism: Neisseria meningitidis Z2491 # 1 182 1 182 183 310 79.0 1e-84 MNYCDFANNLPEDSDNPNKQYHAEQYGFPIEDDNGLFERLVLEINQAGLSWSLILKKQQA FQTAYKGFDIDTVAAFGDADRERLLADAGIVRNRLKINAAIYNAQQIRRIRQECGSFKNW LDMHHPRTKEEWVALFKKHFKFMGGEIVGEFLMSTGYLPGAHAEDCKVYREVLKHRPKWI EAAPADFMRE >gi|289656339|gb|ADEA01000028.1| GENE 94 107279 - 107962 867 227 aa, chain - ## HITS:1 COG:PM1904 KEGG:ns NR:ns ## COG: PM1904 COG0132 # Protein_GI_number: 15603769 # Func_class: H Coenzyme transport and metabolism # Function: Dethiobiotin synthetase # Organism: Pasteurella multocida # 16 223 2 209 213 252 55.0 3e-67 MAAKLFSDGLQTRKQGKILFVGGIDTGIGKTVATGWLAAKLMRQGFSVITQKIVQTGCTG ISDDILVHRRLQNLPLLPEDTDGTTCPYLFGYPCSPHLAAHMAGARIAPAVINRATAILA ERYDYVLLEGAGGLAVPLDDTLTTLDFIRAQAYPAVLVTSGRLGSINHTLLSLSACRQQG IAVEMLIYNRFPPADPLIERETAEYLQRYLRQHFPQTAFEYMDGQKP >gi|289656339|gb|ADEA01000028.1| GENE 95 107952 - 109241 1651 429 aa, chain - ## HITS:1 COG:HI1554 KEGG:ns NR:ns ## COG: HI1554 COG0161 # Protein_GI_number: 16273454 # Func_class: H Coenzyme transport and metabolism # Function: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase # Organism: Haemophilus influenzae # 1 427 2 428 430 635 68.0 0 MDIRTLTELDRSHIWHPYSSTADPAPAYPVERADGVTITLKDGRRLLDGMSSWWAAVHGY NHPRLNRAAVLQLEKMSHVMFGGFTHDAAAKLTQTLLGILPSGLDTVFYADSGSVAVEVA MKMAVQYQHALGVPRRSKFAALRAGYHGDTWHAMSVCDPVTGMHSLFAERLPVQFFLPQP PVKFGEPWREEAVAPLADLLDKHGGEIAALIVEPVVQGAGGMYFYAPEYLKRAQALCREH GVLLIFDEIATGFGRTGKLFACEHADVVPDIMCLGKALTGGYLTLSAAVTHKNIADTVSN GAAGCFMHGPTFMANPLACAVADESVRLLVEGGWRENVARIEAQLRETLAPARDIAAVKE VRVLGAIGVVEMWEPVNLRRLQPKFVERGVWLRPFGKLVYTMPPFIMQPHELDKLSDGLI AALKEEYGG >gi|289656339|gb|ADEA01000028.1| GENE 96 109363 - 109749 642 128 aa, chain - ## HITS:1 COG:NMB0575 KEGG:ns NR:ns ## COG: NMB0575 COG0509 # Protein_GI_number: 15676480 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system H protein (lipoate-binding) # Organism: Neisseria meningitidis MC58 # 1 128 1 128 128 219 96.0 1e-57 MSNNIPAELKYVASHEWLRLEDDGTITVGITHHAQELLGDIVFVELPEVGANLAAEEQAG VVESVKAASDVYAPIAGEVVAVNEDLPSAPETANSAPYGAGWFFKIKPANPADYDGLLTA EQYAGEVD >gi|289656339|gb|ADEA01000028.1| GENE 97 109869 - 110969 1884 366 aa, chain - ## HITS:1 COG:NMB0574 KEGG:ns NR:ns ## COG: NMB0574 COG0404 # Protein_GI_number: 15676479 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system T protein (aminomethyltransferase) # Organism: Neisseria meningitidis MC58 # 1 366 1 366 366 716 99.0 0 MTALKTTPFHQAHQDAGAKLVDFTGWELPIHYGSQIAEHEAVRTDAGMFDVSHMLVTDVA GANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNEAETQYRIVSNGA TREKDTAQFHKVGQEFGVAFNPRYDLGMLAVQGPKAIEKLLTVKPEWADVVHNLKPFQGA DLGNDWFVARTGYTGEDGVEVILPGTEAVAFFKALQQAGVQPCGLGARDTLRMEAGMNLY GNDMDDDTSPLEAGMGWTVDLKDESRDFVGKAALLALKEKGVAVKQVGLLLDKGGILRAH MEVLTDKGKGETTSGVFSPSLKQSIAIARVPKDFDGDTAKVLMRGKEVDVRVLKLPFVRN GQKQFD >gi|289656339|gb|ADEA01000028.1| GENE 98 111524 - 112006 610 160 aa, chain + ## HITS:1 COG:NMB0573 KEGG:ns NR:ns ## COG: NMB0573 COG1522 # Protein_GI_number: 15676478 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Neisseria meningitidis MC58 # 1 160 28 187 187 265 85.0 3e-71 MASITLDKTDLKILQVLQENGRLTNVELSERVALSPSPCLRRLKQLEDAGIIRKYAALLS PVAVELGLQAFIRVSISKAKVAREEFSAAVQTWPEVLSCFALTGETDYLLHAFFTDMNAF SHFVLDTLLSHEGVQDAQSSFVLKEIKNTTALPLTHLQRD >gi|289656339|gb|ADEA01000028.1| GENE 99 112117 - 112479 241 120 aa, chain + ## HITS:1 COG:NMA0754 KEGG:ns NR:ns ## COG: NMA0754 COG2832 # Protein_GI_number: 15793729 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 2 120 1 119 119 163 73.0 6e-41 MLIRYFFWTCGALSLALGIIGIFLPILPTTPFVLLAAACWAKASPRFHRWLHRHPRFGPM VQNWERNRAVPRRAKYFAFSMMTVSCLFLFWRFPEKWWIGAVSAGFCFCVAVWMWRLPDS >gi|289656339|gb|ADEA01000028.1| GENE 100 112857 - 114272 2043 471 aa, chain + ## HITS:1 COG:NMB0570 KEGG:ns NR:ns ## COG: NMB0570 COG1055 # Protein_GI_number: 15676475 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/H+ antiporter NhaD and related arsenite permeases # Organism: Neisseria meningitidis MC58 # 10 471 10 473 473 652 77.0 0 MRPYLVCFALLLPSAARAADFHGEELGLLWGLPFALILLSIALCPLLLPNFWHHHFGKIT AFWTVLFLVPLVAVFGFDAGVHTVVHALVEEYIPFILLLLALYTISGGILVWGNLHGSPK LNTALLAIGTALASVMGTTGAAMLMIRPLLKANDNRKHQVHVVVFFIFLVANIGGGLTPL GDPPLFLGFLKGVEFMWTVRHMMPPVLISAAVLLTVFYIFDSILYAREDEIKQKDPTPDS KLQIFGKWNFLLLAGVVGAVLLSGVWKPDHPGFDILGSHYALPNLVRDIILLALTVVSLA ITPKQVRAGNEFNFEPIIEVGKLFLGIFITISPVLAILKAGEAGALHGVVSLVHDEAGNP INTMYFWMSGLLSAFLDNAPTYLVFFNMAGGNAQALMTGPLFHSLLAVSMGSVFMGAVTY IGNAPNFMVKAIAEQRKVKMPSFFGYMAWSAVILMPLFALLTVIFFVLQLI >gi|289656339|gb|ADEA01000028.1| GENE 101 114468 - 115283 1002 271 aa, chain + ## HITS:1 COG:PM1322 KEGG:ns NR:ns ## COG: PM1322 COG3315 # Protein_GI_number: 15603187 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: O-Methyltransferase involved in polyketide biosynthesis # Organism: Pasteurella multocida # 6 251 11 260 276 153 35.0 3e-37 MLEIENAVSETLLIPLYIKYLSSQQPDPILYDAAACRLIPQIEYDFSKFDHAYRSIAGTA IRAHYFDNMTADFIRHRKNPVIVELGCGLDSRHERLGNRAGEAPFYLLDLPDVIALREKL LPPRAGETLIAASAFDEEWMDNLLQSHPDAQFLFLIEGVLMYFPKENVRDLFQKLAQRFH GSEILFDVTSTWMTKVSDRHDALKHTRARFAFGCDNDREPELWAANLHMIAAKYLATDFP AWKKTGFFSYWIMRLFPPMRNSYRFLYYRVD >gi|289656339|gb|ADEA01000028.1| GENE 102 115415 - 115978 758 187 aa, chain - ## HITS:1 COG:PM0368 KEGG:ns NR:ns ## COG: PM0368 COG0790 # Protein_GI_number: 15602233 # Func_class: R General function prediction only # Function: FOG: TPR repeat, SEL1 subfamily # Organism: Pasteurella multocida # 46 181 65 199 242 69 32.0 3e-12 MKRMFVLFVGIILSATAAPIHSGGGEFGRQNAAEGQAAYLLDRGIEAFNRRDYDEALTIF TQASAAGHVKAQRYIGLMYLNGYGVRQNAGRAAAEFKKAADKGDITAQYWLAYCYEHGLG ISKSISEAVDWYQESARRGDHISAPAMTALGRLAESDDVKEALDWYKKSAAAGDKEAQAA LRRLDMK >gi|289656339|gb|ADEA01000028.1| GENE 103 116134 - 117213 1310 359 aa, chain + ## HITS:1 COG:NMA1771 KEGG:ns NR:ns ## COG: NMA1771 COG0079 # Protein_GI_number: 15794664 # Func_class: E Amino acid transport and metabolism # Function: Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase # Organism: Neisseria meningitidis Z2491 # 1 358 1 358 365 490 67.0 1e-138 MTAPTDFIRPEIKNMTAYHVTDVPENFIKLDAMESPYHPFARSPALLEEWARLLAQSPVN RYPNPASCGLQPALRKAFGIPQAAQIALGNGSDELIQFLTMLVAKPGATVLAAEPSFVMY RHNALLYGMNYVGVPLKADFSLDLPAMLQAVETHNPALVFIAYPNNPTGVCFKREEVEAI IRAAKGIVVVDEAYGAFSRDSFLPQAGGFENLVVMRTVSKIGFAGIRIGYASAGELIIKE LVKILPPYNMNQLSLATAAFALENFEVIDDTILKLKEERTRMFEELSYFSRLKTFPSEAN FITVRVPDALELFQTMKDNKILIKNLHGQHPLLNQCVRITIGSPEQNDAVLSVIRRLYV >gi|289656339|gb|ADEA01000028.1| GENE 104 117250 - 118167 1174 305 aa, chain + ## HITS:1 COG:NMA1772 KEGG:ns NR:ns ## COG: NMA1772 COG0131 # Protein_GI_number: 15794665 # Func_class: E Amino acid transport and metabolism # Function: Imidazoleglycerol-phosphate dehydratase # Organism: Neisseria meningitidis Z2491 # 1 304 3 304 305 416 69.0 1e-116 MTKTQLHLTNFYQLVEEAGSLTALARKCGYDNSASLSQLKRRLETQAEDESARGIRPSLA AKLEAGMGKRKGWLSRDHSKDKEKAAARMTAEAAENFIMPSEVVISTEGRFVTVTRNTRE TQITLSLNLDGTGQSRLDTGVPFLNHMLDQIARHGMIDLEITCKGDTYVDDHHTVEDIGI VFGQALKQALGDKAGIRRYGHAYVPLDESLSRVVLDLSGRPGLIYNVDFVRAWIGRFDVD LFSEFFHGIVNHSMMTLHIDNLRGNNAHHQAETVFKAFGRALREAVEPDARLAGGMPSTK GTLTD >gi|289656339|gb|ADEA01000028.1| GENE 105 118180 - 118476 354 98 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298370101|ref|ZP_06981417.1| ## NR: gi|298370101|ref|ZP_06981417.1| hypothetical protein HMPREF9016_01436 [Neisseria sp. oral taxon 014 str. F0314] # 1 98 1 98 98 141 100.0 1e-32 MLPVFLLLLFGALQTRLLPQIPALAWAAVFFSIIFLAGITVFHGETSLVATCALGFYAWG YFILLRRWQNKARSVRITLYLAGALFPLTLIWLFLANI >gi|289656339|gb|ADEA01000028.1| GENE 106 118900 - 120936 2898 678 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298370102|ref|ZP_06981418.1| ## NR: gi|298370102|ref|ZP_06981418.1| mucin-2 [Neisseria sp. oral taxon 014 str. F0314] # 1 678 1 678 678 1150 100.0 0 MAITIGTKRPITIPSAPSNSIVIASAKTPSGKTYHVYQSKTHGRYIDAAEFGTDASGRTD SLPAIKNALKAAHSAHASVYLSGKLYVSDTIVIDKTLSSVQGIIGNGMGNTTISFNKAQK GIFNSDTNETDIRENAGILVDGVNGVSIKNLSVKYTHTDFYRKGLSYFGKVSGILVNDAD NTLISGVEVSGANRAGVVFTSTAALQEDPAKKGMTFKARVQNGELNETHDNLPTGENNRI ENSYLHHNRVAGALVSYQEKFVADNNTFSYNGHAGDGGTGYGIATMAGSYNFGVTFSNNR TDHNYRKGLDVHDGTDIVISNNISNGDRMYGIAVYNRQFAMENVKITGNTIIQDAKFRLL HDDNAECTYYGYSGIQLQTNTQNKNLYTHDNARYEISGNTISGLTLFKDDIHTYGIEFRN HENTASYNLDITGNTINGTSSRYLIAAINDTTMGNNAGLGSGNINISGNTAQIGEIAADT VPVYVEEKSATLTQRGSVNVGNNDIAIGQSNGSAEAVRLIGNAKTYTVHDNHFKLGGVVD KAIIDIISTSKAASSATINNNTLETPLKKDLYSYWMQADHASYIAIDNTHNGKNLSTASN FNTPTLKSFLSAQTATEAADVSSTYTVDADSIPLSTLLSSTGTAQAGSVHIDVPHTAATE YALNETFTVDKDKTHSHL >gi|289656339|gb|ADEA01000028.1| GENE 107 121098 - 121970 1482 290 aa, chain + ## HITS:1 COG:NMA1773 KEGG:ns NR:ns ## COG: NMA1773 COG2084 # Protein_GI_number: 15794666 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases # Organism: Neisseria meningitidis Z2491 # 1 289 1 288 289 472 85.0 1e-133 MSNNEYTQIGWIGLGQMGNPMVTRLLDAGIEVGVYNRSPDKTADLQTKGAKVYPSSTELI RAYPVIFLMVSDYAAVLDILNEDIRKELDGKIIVNMSTIAPSENLAVKTIVEAAGGQFAE APVSGSVGPATNGTLLILFGGEEGVLNPLQKVFGILGKKTFHFGNVGKGSGAKLVLNSLL GIFGEAYSEAMLMAQQFGIDTDTIIEAVGGSAMDSPMFQTKKSLWANREFPPAFALKHAS KDLNLAVNELKQAGNSLPAVETVAESYREAVRAGYGEQDVAGVYLNLAKE >gi|289656339|gb|ADEA01000028.1| GENE 108 122229 - 122876 964 215 aa, chain + ## HITS:1 COG:NMB0630 KEGG:ns NR:ns ## COG: NMB0630 COG0118 # Protein_GI_number: 15676532 # Func_class: E Amino acid transport and metabolism # Function: Glutamine amidotransferase # Organism: Neisseria meningitidis MC58 # 1 212 1 212 212 335 72.0 4e-92 MKVAVVDYGMGNLHSVLKSVQAAQSLSGKTAEIYLTDRPEDVSAADKIIFPGQGAMPDCM AALRKSGLGEAVADGLENKPFFGICVGAQLLFEHSEEGDTAGLGRFKGRVKRFLPNQTDV QGNRLKVPHMGWNTVRQTRPHPLFKDIAPNSRFYFVHNYYFAPEDPDVVLGTSEYPHEFA CIVGKDNVFATQFHTEKSHDAGLLLLRNFLDWNGG >gi|289656339|gb|ADEA01000028.1| GENE 109 123115 - 123858 1134 247 aa, chain + ## HITS:1 COG:NMB0629 KEGG:ns NR:ns ## COG: NMB0629 COG0106 # Protein_GI_number: 15676531 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase # Organism: Neisseria meningitidis MC58 # 1 244 1 244 245 408 86.0 1e-114 MLLIPAIDLKEGRCVRLKQGLMEQATVFSDSPAETALHWLKQGARRLHLVDLNGAFVGIP KNFPAIKSILAEVANDIPVQLGGGIRDLATIEKYLDLGLADVIIGTAAVKNPDFVREACK EFPGQIIVGLDAKDGMVAIDGWATVTEHRVADLAKRFEEDGVNAIIYTDIGRDGMMSGIN IEATVKLAQAAAVPVIASGGLTNLDDIRALCAVEKHGVAGAITGRAIYEGSIDFAEAQKL ADALSAA >gi|289656339|gb|ADEA01000028.1| GENE 110 124002 - 124319 562 105 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298370106|ref|ZP_06981422.1| ## NR: gi|298370106|ref|ZP_06981422.1| 1-(5-phosphoribosyl)-5- ((5'-phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomerase [Neisseria sp. oral taxon 014 str. F0314] # 1 105 87 191 191 197 100.0 2e-49 MLEAFVLGFWIIWSSNRDIYALSESLWFTLLAAVLHQLTDFSMPVIDQQWMMSNGALWLY VAVAFYLVNRLSNSFMATMLMASAASIGYYQLAAHLPDWISGLSA >gi|289656339|gb|ADEA01000028.1| GENE 111 124417 - 125184 1293 255 aa, chain + ## HITS:1 COG:NMA0838 KEGG:ns NR:ns ## COG: NMA0838 COG0107 # Protein_GI_number: 15793808 # Func_class: E Amino acid transport and metabolism # Function: Imidazoleglycerol-phosphate synthase # Organism: Neisseria meningitidis Z2491 # 1 255 1 255 255 432 89.0 1e-121 MALAKRIIPCLDVKDGRVVKGVNFLGLRDAGNPVDVAKRYNDEGADELTFLDITASSDNR DTILHVIEDVASQVFIPLTVGGGVRTVADIRRLLNAGADKASINTAAVTNPDLVNEAAGF FGSQAIVVAVDAKAVNPENTRWEIFTHGGRTPTGLDAVEWAVEMQRRGAGEILLTSMDRD GTKQGFNLPLTRAVSEAVDIPVIASGGVGNVQHLIDGIKEGKADAVLAASIFHFGEVSIR DAKLAMREAGIEVRL >gi|289656339|gb|ADEA01000028.1| GENE 112 125284 - 125682 700 132 aa, chain + ## HITS:1 COG:NMA0837 KEGG:ns NR:ns ## COG: NMA0837 COG0139 # Protein_GI_number: 15793807 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosyl-AMP cyclohydrolase # Organism: Neisseria meningitidis Z2491 # 1 131 1 131 131 230 87.0 4e-61 MDNSLLEAVKFDEKGLVCAIAQDRQTCRVLMVAWMNAEALQKTVETGFAHYYSRSRQKQW MKGEESGHTQKVYELRLDCDGDAIVMLIDQNGGIACHTGRESCFYKIWKDGTWQTVDAVL KDEEAIYGHTHP >gi|289656339|gb|ADEA01000028.1| GENE 113 125663 - 125809 67 48 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGIRILRGRLKTSAASFAKTSEASFAKNWVDDCLLSAPETKQADALSE >gi|289656339|gb|ADEA01000028.1| GENE 114 125837 - 126160 568 107 aa, chain + ## HITS:1 COG:NMA0807 KEGG:ns NR:ns ## COG: NMA0807 COG0140 # Protein_GI_number: 15793781 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosyl-ATP pyrophosphohydrolase # Organism: Neisseria meningitidis Z2491 # 1 106 1 106 107 151 77.0 3e-37 MTDTILSQIQNTVDSRKGGDPEASYVAQLLHKGEDKILKKVIEEAGEVLMASKDGGGEHL VYEVADLWFHTMVLLAHHGLRAEDVLNELTRRQGLSGLAEKAARKEP >gi|289656339|gb|ADEA01000028.1| GENE 115 126309 - 126632 536 107 aa, chain + ## HITS:1 COG:NMB0602 KEGG:ns NR:ns ## COG: NMB0602 COG0537 # Protein_GI_number: 15676506 # Func_class: F Nucleotide transport and metabolism; G Carbohydrate transport and metabolism; R General function prediction only # Function: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases # Organism: Neisseria meningitidis MC58 # 1 106 1 106 107 182 83.0 2e-46 MSDCIFCKIADKEIPANTVYEDGEMLCFKDIRPAAPVHLLLIPKVHFDSLAHARPEHEAL LGKMMLKVPQIAEKSGLTNGFKTVINTGKGGGQEVFHLHIHIMGTPA >gi|289656339|gb|ADEA01000028.1| GENE 116 126707 - 126913 561 68 aa, chain + ## HITS:1 COG:NMA0805 KEGG:ns NR:ns ## COG: NMA0805 COG1826 # Protein_GI_number: 15793779 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Sec-independent protein secretion pathway components # Organism: Neisseria meningitidis Z2491 # 1 65 1 65 67 83 84.0 1e-16 MGSFSVTHWVIVLIIVVLVFGTKKLRNVGKDLGGAVHDFKKGLNEGTEGQSAKKDEVIEH KKDEEDKA >gi|289656339|gb|ADEA01000028.1| GENE 117 126917 - 127570 858 217 aa, chain + ## HITS:1 COG:NMB0600 KEGG:ns NR:ns ## COG: NMB0600 COG1826 # Protein_GI_number: 15676505 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Sec-independent protein secretion pathway components # Organism: Neisseria meningitidis MC58 # 1 216 1 227 228 237 58.0 1e-62 MFDFGLGELLLVGVVALIVIGPERLPKAARMAGNMVGKLQRLVSSVKQELNTQIELEELR KAKQEFESAASQFKDDLKDIGGNTQNDLNEISDGLKPWERLPEQRTPADFGVDEHGNPLP QTESAQTEETVFDDNGQPISPVSAPDADNAYDADKAWHDYLTLSARPSETPEVSYIETLP AAPAVLHTASLRKQAMSRKRDLRPKYHAKPKLRIRKK >gi|289656339|gb|ADEA01000028.1| GENE 118 127578 - 128354 1004 258 aa, chain + ## HITS:1 COG:NMA0803 KEGG:ns NR:ns ## COG: NMA0803 COG0805 # Protein_GI_number: 15793777 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Sec-independent protein secretion pathway component TatC # Organism: Neisseria meningitidis Z2491 # 1 252 1 252 256 351 78.0 7e-97 MSDSQTEQPTQPLIEHLLELRRRLMWIVGGILVCFLALAPFAQQLYSFAAQPLMAALPKD TSMIATDVVAPFFVPIKVTLMAAFLISLPHTLYQIWAFVAPALYQNEKRLVLPLVLSSLI LFFTGMAFAYYLVFPLIFKFLTGITPVGVSMSTDIDKYLSFILGMFVAFGTTFEVPVVVV LLARMGIVDTETLKRARPYVIVGAFIVAAVITPPDVVSQILLAVPLIILYEAGIWFSRFT KPVDRDDANDTPQPPVQV >gi|289656339|gb|ADEA01000028.1| GENE 119 128483 - 128863 367 126 aa, chain + ## HITS:1 COG:NMA0801 KEGG:ns NR:ns ## COG: NMA0801 COG3308 # Protein_GI_number: 15793775 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis Z2491 # 12 121 3 112 117 145 71.0 2e-35 MKQRSVNISARKPLPYAAACASLLALIAVSLAWELWIAPLREGGSWLALKALPLCLPLSG ILKGRVYTYQYSSMLVLIYFAEAVMRLFDATPAGRLCAAAAAVCCTVFFVSCMAFVKQKQ KEARHG >gi|289656339|gb|ADEA01000028.1| GENE 120 128856 - 130733 2381 625 aa, chain + ## HITS:1 COG:NMB0596 KEGG:ns NR:ns ## COG: NMB0596 COG3307 # Protein_GI_number: 15676501 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipid A core - O-antigen ligase and related enzymes # Organism: Neisseria meningitidis MC58 # 38 622 24 604 604 562 48.0 1e-160 MADRRLFSDGHETAYSPYSRQIRRDEWNMGLVPLWFGFLWVCIAPFLSLYRVGPLSSFYL EAGSLLGAVVLVLATSTSGLLNVRLPSASIAFFVLAAFWWLQARMMHLMYPGLNDMAAWT FVILALTAWACRGWVAEYGQERVAAVFAWALLFGALMQAAVALMQFNGWAGMKIFHNILA YGGRESINGQLGQRNHLGHYLMWGVLAASYLWSVRRMPAWAGVLSITALSAALGLVNSRT ILTYVIGVGLLLPVWRWRAGKESNRTVLIFLFTIALVAIIQFGMGPLLDTFGNGHYETAV ERVGRSSFEGSARETEWGKAWIAFKNAPLFGHGWNGFALQSFLINAEQHNFINNVISVLF THSHNIVLQLLAETGLVGTLLTAGCLIAAIWRMTVRPYHPASLLMLSLMAVSLCHSMLEY PLWYIYFLTPFGIMVSLSPIRRKDLSDGLNQAKLRNYAGGIAALYLIAGILHLGWVYTDL TEYSRRPKTDTPADTALKIEGLRRIADSQPMLRYYAQLSLTHYADPTDIVIRPWAEQAAI EALTFRPFANAHQVGLYRYRRGETEQGAQWMQSIYYYYPYMMPFYASKIRSNGLFKPLLP KILADCKAFVSAPKHETAKSCEAPK >gi|289656339|gb|ADEA01000028.1| GENE 121 130896 - 131573 1200 225 aa, chain + ## HITS:1 COG:NMA0798 KEGG:ns NR:ns ## COG: NMA0798 COG0745 # Protein_GI_number: 15793772 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Neisseria meningitidis Z2491 # 1 225 1 225 225 376 92.0 1e-104 MSRVLLVDDDALLTELLTEYLTAEGLNVHSVPDGEAGVHEILTGQYDVVVLDSMMPKMNG LDVLKNVRSQSTVPVIMLTAKGDDIDRIIGLEMGADDYVPKPCTPRELLARINAILRRAQ RGGEQNSAPNSISVSDVVLYPAKRQATIREEPLELTSTEFNLLEVLMRHAGQVVSKETLS IEALDRKLAKFDRSIDVHISSIRHKLGDASLIQTVRGLGYLFVKN >gi|289656339|gb|ADEA01000028.1| GENE 122 131589 - 132962 1884 457 aa, chain + ## HITS:1 COG:NMB0594 KEGG:ns NR:ns ## COG: NMB0594 COG0642 # Protein_GI_number: 15676499 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Neisseria meningitidis MC58 # 1 457 1 457 468 798 83.0 0 MKLFQRIFATFCAVIICAIFVASFSFWLVQNTLAENQFNQRRTIETTLMGSMVSAFRSRG DSGAREILNEWKDNPVSDAVFVILDDDNKDILDRDIDEQTIKRARAFAINNPNSDLARIE YGRFGEEYLFFIRDWDNQQAKRLPSPLFIPGLPLAPIWHEFIILSFIIIVGLLMAYILTN NITKPIRILGNGMDRLARGELQTRISQQVDDRDDELSHLAVQFDKMAAQLEKLVAKERHL LHHVSHEMRSPLARMQAIVGLIQAQPQKQEQYLKRLEGELTRMDTLVGELLTLSRLETSN VPLEKESLALVPFLTNLVEDCQAIAQQNKQTVSLHIDAKVPQTATIMANESYLYRAFDNV IRNAMNYSPEGSTISVNIKQDSKHWLIDVTDNGPGVDEMQLPHIFTAFYRADSSASKPGT GLGLALTQHIMEQHCGKIIAENVKPNGLRMHFVLPKK >gi|289656339|gb|ADEA01000028.1| GENE 123 133171 - 135576 2969 801 aa, chain + ## HITS:1 COG:NMA0796_1 KEGG:ns NR:ns ## COG: NMA0796_1 COG1042 # Protein_GI_number: 15793770 # Func_class: C Energy production and conversion # Function: Acyl-CoA synthetase (NDP forming) # Organism: Neisseria meningitidis Z2491 # 1 620 1 620 620 561 49.0 1e-159 MSVQSLPAYFFTPQHIILVGASERPHSLGERILTALLNAPFQGKITPVNPRHKTIAGLTS YTNVARLEETADLVITVTPPETYESLFKACRKKQLHHVIIIQDWDNLPPEAWETAAAAIR KHHGEKLNISVCNPAGAQIPTQGLNAGILPDYPAGHVAVLTGQASLSSEINVLLRKMKQG VSRHISLNYDLSPTTSADWLNRFGHKRHTRAAVIHFNPRENLRKLFSAIRYFTRHTPIIL HCTHHADSVERSILHCLGRHCNFIATFNSSELEAALHAHLSALQPASTLNVLSNTPVAWL QEKAVQSGISLVMPSEKPHIDQAYIGSNPSPMLYRSLAVGQLQQHQTEALLAVVAPTAEH NENTLTGVLSALQQPDGKPLLISSPFSDGLLQFDRPEQAVKALSLRNIAAHLQNEQNKTA KPRPAYIKTPQLKNLPKLLETQDFAQLAKNLHLPDYRPQATHVGAQLTFTRHPAYGIILS CTYNGRTRTVLPPFSTLDGEKLIRFADLKTKQKHICQLLHSLNTLLEQEQYFGSIIINLC GDTLTSDFRPSENEIQAIVSKDQKRPAAATVPRKNLTAAEFISTTSEAAAEFIRSKSEAA AEFLAGKADTAAPPENVRAPYPSGYPQKITLPDGETLRIRPFTPEDAEAKQAFVRSLSPE SRYFRFMAQTNELPQATLARFSNLDYYSEGAWIAENSDGLIQGISRFSRLTRDECEFGLT LAENARGKGLAIELMRLIIRLATQQGYQSMSAEILKSNQAMLKLARKLGFALSDSNTDKD LYQARLSLLPQPTAPKRKFRQ >gi|289656339|gb|ADEA01000028.1| GENE 124 135653 - 135901 392 82 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15676497|ref|NP_273636.1| 30S ribosomal protein S16 [Neisseria meningitidis MC58] # 1 81 1 81 81 155 93 1e-36 MVVIRLARGGSKHRPFFNVIVTDSRNRRDGRFIERVGFYNPVANEKQERVRLNADRLNHW IAQGAQVSDAVTKLIKNQKAAA >gi|289656339|gb|ADEA01000028.1| GENE 125 135918 - 136427 176 169 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163796730|ref|ZP_02190688.1| 50S ribosomal protein L19 [alpha proteobacterium BAL199] # 7 155 4 151 179 72 30 1e-11 MTDTQQRVAMGYIKGVFGIKGWLKIAADTEYPDSLLDYPEWLLSKNGKTLNVVLETGKLV GDELQVKFEGIDDRDQAFALRGYTVEIPRAEFSPAGEDEYYWTDLVGMTVVNKEGITLGT VKNLMETGANDVLVIQGTDKQILIPFVSNYIETVNHDSKTITADWGLDY >gi|289656339|gb|ADEA01000028.1| GENE 126 136427 - 137173 570 248 aa, chain + ## HITS:1 COG:NMB0590 KEGG:ns NR:ns ## COG: NMB0590 COG0336 # Protein_GI_number: 15676495 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-(guanine-N1)-methyltransferase # Organism: Neisseria meningitidis MC58 # 1 248 1 249 249 410 81.0 1e-114 MFIQSITLFPEMFDSITEYGVTGRALKQKLWRFQAINPRRFADNKLGYIDDRPFGGGPGM IMMAPPLQAAIDQAKQACGGGRVIYLSPQGQPFTQQKAAELAESENLILLCGRYEGIDER LLQSSVDEEISMGDFVVSGGELPAMMLMDAVLRLIPGVLGDIQSAEQDSFSDGLLDCPHY TKPLEFQGMSVPDVLRSGNHGLIAEWRLKQSLQRTLERRPDLLEKRSLIPKESRLLKEIL QEQQEIQS >gi|289656339|gb|ADEA01000028.1| GENE 127 137187 - 137552 588 121 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225075461|ref|ZP_03718660.1| hypothetical protein NEIFLAOT_00466 [Neisseria flavescens NRL30031/H210] # 1 121 1 121 121 231 98 2e-59 MNLIQQLEQEEIARLNKEIPEFAPGDTVVVSVRVVEGNRSRLQAYEGVVIARRNRGLNSN FIVRKISSGEGVERTFQLYSPSVEKIEVKRRGDVRRAKLYYLRGLTGKAARIKEKLPARK G >gi|289656339|gb|ADEA01000028.1| GENE 128 137829 - 139043 578 404 aa, chain + ## HITS:1 COG:PM0681 KEGG:ns NR:ns ## COG: PM0681 COG1914 # Protein_GI_number: 15602546 # Func_class: P Inorganic ion transport and metabolism # Function: Mn2+ and Fe2+ transporters of the NRAMP family # Organism: Pasteurella multocida # 3 397 24 426 433 298 45.0 1e-80 MFWKNFSRQFGPGIIMASSCVGGSHIIASTQAGAYYGYQLAFFILLVNLLKYPFFRIAFD YSSVNNRTLLEGYAGKGRLYLYLFLVFNFFATIINIAGGTLLSAVLLGMLLPFNLPLNIL NAATLASFLILLFSRQYQSLDKISKWIMFSLSIITLLALLMAFNKGTAAPAPDFTVTSPW TITAIPFFAALMGWMPAPMELSVSSSMWVIEKNKLNPDYRPKRMIDFNTSYILTIVLALM FMALGALVQYGKTTTPLSGGKFIGQFVDMYTHSIGEWTRLPIIFVAFACIYGTTIVAVDG YSRCNMQAVDLLLKKPLGHDGTKLRYWLFGACILSFVLIQFFNSAIGKMIPFAMTASFLS APVFAWLNLNLAKQYAPKPLWLIPLAWLGWISLIITAIVYLIWV >gi|289656339|gb|ADEA01000028.1| GENE 129 139201 - 140538 1385 445 aa, chain - ## HITS:1 COG:NMA1964 KEGG:ns NR:ns ## COG: NMA1964 COG0334 # Protein_GI_number: 15794847 # Func_class: E Amino acid transport and metabolism # Function: Glutamate dehydrogenase/leucine dehydrogenase # Organism: Neisseria meningitidis Z2491 # 1 443 1 443 444 815 90.0 0 MTVLTDLFAQIKKRDPNQAPFHQAVEEVFQSLDPFLAKNPKYIQQGLLERIVEPERVIMF RVSWVDDKGRVQVNRGYRVQMSSAIGPYKGGLRFHPTVDLGVLKFLAFEQVFKNALTTLP MGGGKGGSDFDPKGKSDGEVMRFCQAFMNELYRHIGADTDVPAGDIGVGGREIGFLYGQY KKIRNEFASVLTGKGLTWGGSLIRPEATGYGTVYFAESMLQTRGDKFAGKRVVISGSGNV AQYACEKAIQLGAKVLTVSDSNGFVLFPDSGMTEAQLEALIELKEVRRERVAIYAKEQGL QYFENQKPWGIKCDIALPCATQNELDEQDAKTLLANGCFVVAEGANMPSTLGAVEQFIKA GILYAPGKASNAGGVATSGLEMSQNAIRLSWTREEVDQRLFGIMQSIHKSCLTYGKEGDK VNYVNGANIAGFVKVADAMLAQGIV >gi|289656339|gb|ADEA01000028.1| GENE 130 140925 - 141719 449 264 aa, chain + ## HITS:1 COG:NMA1963 KEGG:ns NR:ns ## COG: NMA1963 COG0207 # Protein_GI_number: 15794846 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate synthase # Organism: Neisseria meningitidis Z2491 # 1 264 1 264 264 511 90.0 1e-145 MKAYHDLMRHVLEHGIDKSDRTGTGTRSVFGYQMRFDLSKGFPLLTTKKLHLRSIIHELL WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVTEQIK KNPDSRRLIVSAWNPALVDEMALPPCHTMFQFYVADGKLSCQLYQRSADIFLGVPFNIAS YALLTMMMAQVCRLKIGEFIHTFGDAHLYSNHMEQAKLQLSRDFRPLPEMKINPEVKDLF AFKFEDFELTGYNPHPHIKAEVAV >gi|289656339|gb|ADEA01000028.1| GENE 131 141935 - 144532 2181 865 aa, chain - ## HITS:1 COG:no KEGG:BPP0974 NR:ns ## KEGG: BPP0974 # Name: not_defined # Def: putative hemolysin # Organism: B.parapertussis # Pathway: not_defined # 146 608 1335 1801 2215 214 37.0 2e-53 TPTISGKTDVPAGTVVTITVTGKDGHPQVVTTTVKDDGSFEVDVPEALPEGPVSVEAVVK DPAGNEGRASDNGTIDTTAPVITVDAPDNTSDNTPLISGTTDAPAGSIVSITVTDSRDSV QTVSASVGADGRYSVEVPKALAEGRYTAEAAVKDPAGNEGRASDNGTIDTTAPIVNAPGH SVEEASSAAVKGFIQVSDKSPVTAITVAGKDVTSATAAHPVMIHTVRGTLIVTGYDAASG KVTYRYVEGGKAADHSTGDNSVKDSFVVMVRDAAGNTAMDSLDIRITDTAPVAVHDTNSI KDTGMSVSGDVLSNDVLGADTPVAVTVGNTNGQYGSLTLNANGQYTYTVNPNNAAVKALN GGETLKDSFTYTVTDADGDKSTATLDITINGTDADKAVIGKNGGDNITGGTGNDALIGDA GGYRLIIKPGQNYNVALVLDTSESMNTFRTDSGEAYIEMARKSLLKLAKDFAHHDGHLNV TLFAFNSTAKQVVTINDLTEQNVDKLLNQIMSLRAHGVTNYDDAFRDATDWFSKVSSNGY HNVTYFLTDGQPTTYGDTGETPWRGYVTQDAVNAALHSFKKLSAVSDVHAVGFAKGAKES MLDYYDNTVSDGHSITEGSLWYQTYPSPVYYSGAVGESQVVSNPSQLDAALERGSTERVV NNVSSDTLTGGEGDDVLFGDSINTDHLSWTNGITGVAYTSGSHDAMGAKALTEYIKWTDN AGTDATDQQVANYVKNHWKDLLDNRADGGDDTLNGGKGDDVLFGGAGNDTLTGGEGADQF VFLANSNNGNDVITDFQAGVDKVVFADLVSPHDLQNAVWNDETHTLSFTGVGKDGTTYQN SITFNGLSVGETLDSVLQNHVETIG Prediction of potential genes in microbial genomes Time: Thu May 26 13:44:31 2011 Seq name: gi|289656338|gb|ADEA01000029.1| Neisseria sp. oral taxon 014 str. F0314 cont1.29, whole genome shotgun sequence Length of sequence - 35132 bp Number of predicted genes - 36, with homology - 34 Number of transcription units - 20, operones - 8 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 60 - 1658 1302 ## Patl_2658 hypothetical protein 2 1 Op 2 . - CDS 1681 - 2577 1047 ## COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins - Prom 2610 - 2669 3.8 3 2 Tu 1 . + CDS 3085 - 6570 5143 ## COG1196 Chromosome segregation ATPases + Term 6582 - 6639 12.7 - Term 6580 - 6617 9.1 4 3 Tu 1 . - CDS 6641 - 8110 1607 ## COG0397 Uncharacterized conserved protein - Prom 8265 - 8324 3.2 + Prom 8224 - 8283 4.1 5 4 Tu 1 . + CDS 8351 - 9319 1543 ## COG4607 ABC-type enterochelin transport system, periplasmic component + Term 9477 - 9528 8.2 + Prom 9423 - 9482 3.3 6 5 Op 1 . + CDS 9543 - 9740 375 ## COG5515 Uncharacterized conserved small protein + Prom 9749 - 9808 3.2 7 5 Op 2 11/0.000 + CDS 9830 - 10798 1437 ## COG4606 ABC-type enterochelin transport system, permease component 8 5 Op 3 . + CDS 10788 - 11762 1304 ## COG4605 ABC-type enterochelin transport system, permease component 9 5 Op 4 . + CDS 11831 - 12454 928 ## NMC1967 hypothetical protein 10 5 Op 5 . + CDS 12542 - 13300 243 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 - Term 13306 - 13365 2.1 11 6 Tu 1 . - CDS 13386 - 14534 1910 ## COG0620 Methionine synthase II (cobalamin-independent) - Prom 14554 - 14613 2.0 - Term 14578 - 14639 25.6 12 7 Op 1 2/0.143 - CDS 14662 - 15300 223 ## PROTEIN SUPPORTED gi|157803532|ref|YP_001492081.1| 50S ribosomal protein L35 13 7 Op 2 2/0.143 - CDS 15297 - 15668 597 ## COG3759 Predicted membrane protein - Prom 15728 - 15787 2.9 - Term 15759 - 15800 -0.9 14 8 Tu 1 . - CDS 15936 - 16358 463 ## COG0720 6-pyruvoyl-tetrahydropterin synthase 15 9 Tu 1 . - CDS 16419 - 17081 919 ## SSA_1238 hypothetical protein + Prom 17303 - 17362 3.2 16 10 Tu 1 . + CDS 17492 - 17605 134 ## + Term 17613 - 17654 11.3 17 11 Tu 1 . - CDS 17633 - 18292 1014 ## COG0603 Predicted PP-loop superfamily ATPase - Prom 18347 - 18406 3.2 + Prom 18325 - 18384 5.6 18 12 Op 1 . + CDS 18412 - 19011 832 ## COG0558 Phosphatidylglycerophosphate synthase 19 12 Op 2 . + CDS 19057 - 19677 1021 ## COG3647 Predicted membrane protein + Term 19700 - 19741 11.3 + Prom 19746 - 19805 3.6 20 13 Tu 1 . + CDS 19834 - 21576 2516 ## COG2267 Lysophospholipase + Term 21586 - 21633 13.0 - Term 21572 - 21621 14.2 21 14 Tu 1 . - CDS 21637 - 21999 587 ## NGO1981 hypothetical protein - Prom 22222 - 22281 5.4 + Prom 21950 - 22009 4.4 22 15 Tu 1 . + CDS 22239 - 23729 641 ## COG0671 Membrane-associated phospholipid phosphatase + Prom 23757 - 23816 2.2 23 16 Op 1 . + CDS 23864 - 24685 792 ## COG1266 Predicted metal-dependent membrane protease 24 16 Op 2 . + CDS 24753 - 25127 410 ## NT05HA_1516 hypothetical protein 25 16 Op 3 5/0.000 + CDS 25132 - 25818 1055 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase 26 16 Op 4 . + CDS 25815 - 26804 1356 ## COG4589 Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase + Term 26842 - 26884 12.6 - Term 26938 - 26972 4.0 27 17 Op 1 9/0.000 - CDS 26995 - 28356 1093 ## COG2010 Cytochrome c, mono- and diheme variants 28 17 Op 2 9/0.000 - CDS 28387 - 28554 149 ## COG4736 Cbb3-type cytochrome oxidase, subunit 3 29 17 Op 3 12/0.000 - CDS 28559 - 29170 795 ## COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit 30 17 Op 4 . - CDS 29196 - 30632 1367 ## COG3278 Cbb3-type cytochrome oxidase, subunit 1 - Prom 30793 - 30852 7.3 + Prom 30773 - 30832 7.7 31 18 Op 1 2/0.143 + CDS 30958 - 32715 1652 ## COG3975 Predicted protease with the C-terminal PDZ domain 32 18 Op 2 . + CDS 32762 - 33196 452 ## COG3453 Uncharacterized protein conserved in bacteria + Term 33206 - 33262 20.9 - Term 33194 - 33248 20.5 33 19 Tu 1 . - CDS 33292 - 33414 66 ## - Prom 33530 - 33589 3.1 - Term 33564 - 33617 18.5 34 20 Op 1 30/0.000 - CDS 33646 - 34086 717 ## COG0848 Biopolymer transport protein 35 20 Op 2 6/0.000 - CDS 34090 - 34749 1060 ## COG0811 Biopolymer transport proteins - Prom 34769 - 34828 7.0 36 20 Op 3 . - CDS 34834 - 35067 246 ## COG0810 Periplasmic protein TonB, links inner and outer membranes Predicted protein(s) >gi|289656338|gb|ADEA01000029.1| GENE 1 60 - 1658 1302 532 aa, chain - ## HITS:1 COG:no KEGG:Patl_2658 NR:ns ## KEGG: Patl_2658 # Name: not_defined # Def: hypothetical protein # Organism: P.atlantica # Pathway: not_defined # 173 504 2954 3280 4689 212 49.0 4e-53 MSKNITLKINNAKETVETVKFQTASGEVLRIPAQSEVNYQFIDEATQFGPENIMTKRVGD NLEIAFEGSDISNPDLILEGYYSEATDASKSSLLIGQHENGATYPYVPESAEPSEAVTML AEEVVAGQALGGEIIGSMWAFNPLWLAALVPLGAAAAVAANSHHDSSDKFAAITVDAPND QVDTTPIITGTTTDVEAGQIVTITVKDSEGKTQVVSTVVAEDGTYRVEVPNELPDGAYTV IATVADKAGNSATATDTGMIDAVVTLTVNAPDGVSNDNTPYISGTSDAIGSNVNLVITDS KGATHTVTVPVTEEGTYAVDLSEQLPDGKYTVSATVSNSTGKTATASDTGEIDTTAVITI EAPDLSNDNTPTLTGTTTDVEEGQIVTLTVTDSRGGSQVVTATVQADGSYQAEVPNALPD GRYSVEAVVSDKAGNRAEARDDNNGKGNVIDTTAPVITVDAPDNTSDNTPLISGTTDAPA GSIVSITVTDSRGSVQTVSANVGAKRPLQRRSAESIGRRPLHCRSRRQRPGW >gi|289656338|gb|ADEA01000029.1| GENE 2 1681 - 2577 1047 298 aa, chain - ## HITS:1 COG:RSc0900 KEGG:ns NR:ns ## COG: RSc0900 COG2885 # Protein_GI_number: 17545619 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein and related peptidoglycan-associated (lipo)proteins # Organism: Ralstonia solanacearum # 169 298 93 215 218 77 38.0 4e-14 MLKCRNVLWGLLPLVLLSACAHQKKETWIDTTDAAYTTDVPDGRSSVVFYRQANAIEGST INIYVNSQYLGSLQPNAYRQELICAQNQKFHADFTKQDAAYQHKAHSGDYYNLPEGTVSF FKVINDGSGRPILQSVSPEQAEAEMKGVKRQNHTLSRVVSKDKCAQVLKKYNLQASALFK FDRSGYQDMLEQGKREVSTISQDIKQNPAAVTSVNVVGHTDPEGKPEYNDALSVKRAQTV KQALSSSGLDGNIISTQGKGERELVVTNCRKRFPKNAKAREKCDQPNRRVEIILHGEK >gi|289656338|gb|ADEA01000029.1| GENE 3 3085 - 6570 5143 1161 aa, chain + ## HITS:1 COG:NMB0545 KEGG:ns NR:ns ## COG: NMB0545 COG1196 # Protein_GI_number: 15676451 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Chromosome segregation ATPases # Organism: Neisseria meningitidis MC58 # 1 1159 1 1159 1161 1674 97.0 0 MRLSHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGEN MQDVIFNGAATRRPAPRASVELVFDNSDHSLQGAWGQYAEVSIKRQLTRQGESTYFINNQ TVRRRDITDLFLGTGVGARGYAVIEQGMISRIIEARPEELRAYIEEAAGVSKYKERRKET EGRLKDTREHLQRLGDLQNELARQVEKLEKQAETAERYKSLTAQLNRQQDLLDYAQWQQS LAAADKATAQHQSLQAQQDETAAQVQALNDEVHALQTAEQSQQQAVHELSNKRGVLREQI ARLEEQIRHQQNLHQRIERDKQAAQAQMQRIHQEQQQIRVQLEENELQAEEKQTELAEWA MQVAEHEERLPELEEAQATLNAAFQTQQDEANRIRRELALKQQQLAHAEQTVAKHEERKG RLKQENQALNLPDEAETAAVQEAAALLQSQQEHYEEQIIAAEEALHAAREAFQTTSSRFQ SLKQQHITLQAQQQALSQILSQQQEAADFWQATDHAAAPQLWQHITAPAEWQHALSVILA ERLHARAVPHGFVPPAPLPQGQAAWLSDDLSGGLKKSLPVQALLNQIQAQPPFQTALHHW LDGVLCAPDLSYALAHQNDLGTHQIWLTPAGHQVDKVSVLLYAKPAQESLIAQKARLDGI ASELENLAPELSAAEAAFKQAEAAVRSSEVQHKNLMQQQQQHTRQYSQAQQRAAELLART NQGQIRREHIERELAQLAEEQTVLQHTSDGLSDDIATLQEAAAELEHQQQTTAHSRQEQQ GRLKQAQLALLEANRQYGLAEVAVHKLNQQKQNYQQQIARLEQQTLDWQERQQELALAYE TEFQNDEQHIKLDELTEAVHTLDEEYIAVQDKLAQIQEQGREQYARVQTLQTKLPQLQAA TQTALLQQQEALINAKRYHQNLTERAADLDALEALAKESPKVLNSSIGSLTQQIEALGAV NLAALQELEEARERDGYYRSQSEDVQAAITLLEEAIAQIDDKTKARFKETFDAVNGKVQT FFPTLFGGGEATLKMIGDDLLTAGVSIMARPPGKKNSTIHLLSGGEKALTAMSLVFALFS LNPAPFCLLDEVDAPLDDANTSRFCNLVKEMSAQTQFLYISHNRLTMEMAEQLVGVTMQE KGVSRVVAVDIKQALEMAEPA >gi|289656338|gb|ADEA01000029.1| GENE 4 6641 - 8110 1607 489 aa, chain - ## HITS:1 COG:RSc1748 KEGG:ns NR:ns ## COG: RSc1748 COG0397 # Protein_GI_number: 17546467 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Ralstonia solanacearum # 10 489 27 525 525 427 48.0 1e-119 MSRNLSLQPPQFAELPATFYSSVNPEPLNRPYWVAFNPCLAEALGLDEDFQTASNLAYLS GSAERYRPQPLATVYSGHQFGAYTPRLGDGRALLLGDSEDRHGRRWEWQLKGAGKTPYSR FADGRAVLRSSIREYLCSEAMHGLGIPTTRALALCGSQDPVYRERQETAAVLTRIAPSFI RFGHFEYLFYQGREAELKLLADFLIRHHYPDCRVAANPYAELLHQIGLRTASLAAAWQSV GFCHGVLNTDNMSALGLTIDYGPFGFMDAYDRHHVSNHSDGKGRYAYNAQPYIAHWNFSA LANCFESLVPEEFINQTLEQWPDVFQTAYLHKMRGKLGLQHAESGDDALIADLLAALQDG NVDFTLFFRHLAKISHVHGDPLPIELENLFGGNVTPVFNLWLGLYRRRLRGENSRSAERA ERMNRTNPLYVLRNHLAEQVIVLAQSGDYREIERLRRCLENPFEERAEFADFAEPPPAGS TPVRVSCSS >gi|289656338|gb|ADEA01000029.1| GENE 5 8351 - 9319 1543 322 aa, chain + ## HITS:1 COG:NMB1989 KEGG:ns NR:ns ## COG: NMB1989 COG4607 # Protein_GI_number: 15677817 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type enterochelin transport system, periplasmic component # Organism: Neisseria meningitidis MC58 # 1 322 1 321 321 483 81.0 1e-136 MLRFTALAVCCALALGACSQKDSAQPAGSASGVMASAKIEGPSVTVKTTRGEAAVPQNPE RVAVYDFGMLDTLNKLGVPTGMSVDKNLLPYLDAYFKQTKPAGTLFEPDYEALNAYKPQL VIIGSRTAKAFDQLSRIAPTIEMTADTAHLKDSAKERIDALAQIFGKQAEADKLKAEIDA SFEAAKAAALGKGKGLVILVNGGKMSAFGTGSRLGGWLHQDIGVPAADSSIKEKGNHGQP VTFEYIKKTNPDWLFVLDRSAAIGEEGKAAKDVLDNPLVAETTAWKKGQVVYLPPETYLA AGGAQELLNASKQVTEAFNAAK >gi|289656338|gb|ADEA01000029.1| GENE 6 9543 - 9740 375 65 aa, chain + ## HITS:1 COG:SMc03792 KEGG:ns NR:ns ## COG: SMc03792 COG5515 # Protein_GI_number: 15966928 # Func_class: S Function unknown # Function: Uncharacterized conserved small protein # Organism: Sinorhizobium meliloti # 1 64 1 67 68 82 61.0 2e-16 MKLYRYLTGPDDASFCRRVTEALQNGWELYGNPTLTFDGEHIICGQAVVKESDGGYDPEK PLSEY >gi|289656338|gb|ADEA01000029.1| GENE 7 9830 - 10798 1437 322 aa, chain + ## HITS:1 COG:NMA0451 KEGG:ns NR:ns ## COG: NMA0451 COG4606 # Protein_GI_number: 15793454 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type enterochelin transport system, permease component # Organism: Neisseria meningitidis Z2491 # 1 322 1 322 322 382 82.0 1e-106 MPPKPSYFNLSNLLALAVLFIVSLSVGVADFSWRHILSLSDDMRLMLVSRLPRTSALVLT GASMAVAGMIMQILMRNRFVEPSMVGASQSAALGLLLMSLFFPAAALMGKMAVAAAAALA GMLLFMALIRRLPPTAQLMVPLVGIIFGGVIESAAVFIGYETDMLQMLGIWQQGDFSGVL LGRYELLWFTGILALAAYLIADRLTIAGLGETVSVNLGLNRNTILWSGLVIVALITSLVV VTVGNIPFIGLVVPNIVSRIMGDRLRRSLPAVALLGASSVLLCDIIGRVIVFPFEIPVSV VFGVAGTVLFLWLLLRKPAHAV >gi|289656338|gb|ADEA01000029.1| GENE 8 10788 - 11762 1304 324 aa, chain + ## HITS:1 COG:NMB1991 KEGG:ns NR:ns ## COG: NMB1991 COG4605 # Protein_GI_number: 15677819 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type enterochelin transport system, permease component # Organism: Neisseria meningitidis MC58 # 1 324 1 324 324 407 76.0 1e-113 MPSENHIGFMQGGSRPLWTAAALLLASCALFLTLDAGGNWDFVLPLRLGKLAALLTVAYA VGVSTMLFQTLTNNPILTPSILGFDSLYIFLQTLLVFALGGAGYSQLPPAGKFGFELVAM MGGSVLLFFILMKQGGRDLARMILIGVIFGVLFRSLSSLLQRMIDPEEFAVAQAYTFASF NTVNQKLLGIGAAVIAASVFFVWRERHRLDVYMLGRDQTVNLGINYTRNTLWILLWIAAL TATSTAVVGPISFFGLLVAALTNHLASSMKHAVRLPLAFCTAGILLVGGQTLFEHLLGMK AVLSVVVEFAGGLVFLYLILRKRK >gi|289656338|gb|ADEA01000029.1| GENE 9 11831 - 12454 928 207 aa, chain + ## HITS:1 COG:no KEGG:NMC1967 NR:ns ## KEGG: NMC1967 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 205 1 206 208 308 78.0 1e-82 MTQIKYPEFFNRAPVLRVQDKLAEFLGAAEHGIMEYRYADAVRLCGHSCPTVAGAYLMVL KGLQALYGTELPQRGEIEVAMQGARDGGTVGVTAAVAQLLTGAAPETGFGGIGPHGRFSR RNLLSFDAGTDAVLTLRRKDNGKTVAVSLNAGMYPFAPEMRELMPKAVGGAATPEELKRF GELWQARVKAFLLDLADNPQFVDVRAA >gi|289656338|gb|ADEA01000029.1| GENE 10 12542 - 13300 243 252 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 1 225 278 509 563 98 30 6e-20 MISIRNVSHKIGSQLILDDVSLEIPQGGITALIGPNGAGKSTLLSFMARLRPLERGRISY AGKDVSSTPTAELAKTLSILTQENSIMSRITVRDLLMFGRYPYHQGRPSETDKAVVGNAL GEFRLESFADRYLTELSGGQRQRAMIAMVFCQCTDYVLLDEPLNNLDMYHARALMRLLQR LTHEHKRTTVVVLHDINQAAAYADFVVAMKNGRVALTGRPEEVFTEENIRDLFDMDVAVL DYQGKKLIVHHV >gi|289656338|gb|ADEA01000029.1| GENE 11 13386 - 14534 1910 382 aa, chain - ## HITS:1 COG:lin0838 KEGG:ns NR:ns ## COG: lin0838 COG0620 # Protein_GI_number: 16799912 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase II (cobalamin-independent) # Organism: Listeria innocua # 10 380 1 366 367 379 50.0 1e-105 MSKLFPNAVMRTRAPYRFDIVGSFLRPDSLKQARRRCACGECSLEEMHRVEDREIATLIA KEKAVGLPNVTDGEFRRTWWHLDFLFELLGVELAEAEEYSTKFQAHMHRPVTLKITGKIE FPNAHPFLAHFKALQEEAGGHPVKFTIPSPSMLHLITCVRTPNPQLIERYAGRNDLLLAD ITAAYVKAVNALYDAGCRILQLDDTSWGEFCSEEKRALYQAQGVDVDATARSYVKMLNDI RAAAPADMVLTMHVCRGNFRSTWFSSGDYEPVAEILFGGCNVDGFFLEYDSDRAGSFKPL RFIKNQQVVLGLVTSKSGELEDRDAVIGRIKEAAQYVDINQLCLSPQCGFASTEEGNVLT EEEQWKKLALIRSIVEEVWGNA >gi|289656338|gb|ADEA01000029.1| GENE 12 14662 - 15300 223 212 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157803532|ref|YP_001492081.1| 50S ribosomal protein L35 [Rickettsia canadensis str. McKiel] # 9 212 14 225 225 90 29 1e-17 MKKISVVPENPQYRIVEIFESLQGEGWNTGMPAVFVRLGKCNLACGWCDTDYLKFGMMSL SDILGRLKTYAARNIIITGGEPTIQPHLDTLLDALKAEGYFLCIETNGLKPAPPQIDYVA TSPKACYAAKYETNCIAEADEVRIVADGDVVAFCENMERKIRARHYYLSPCEQNSVMNIY DTIRQIGLLNSRPDASVHWQLSVQTHKWAGIE >gi|289656338|gb|ADEA01000029.1| GENE 13 15297 - 15668 597 123 aa, chain - ## HITS:1 COG:NMA0706 KEGG:ns NR:ns ## COG: NMA0706 COG3759 # Protein_GI_number: 15793684 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis Z2491 # 1 112 1 112 123 186 90.0 6e-48 MKLLSTLLVLLVAAEHFYIAWLEMTQIPSEKATEIFKLPYEFMEQKRVQTLFSNQGLYNG FLGIGLIWSRFAAPDNAVYGATILFLGFVLIAAAWGAFSSGNKGILVKQGLPAMLAAAAV LAV >gi|289656338|gb|ADEA01000029.1| GENE 14 15936 - 16358 463 140 aa, chain - ## HITS:1 COG:NMA0704 KEGG:ns NR:ns ## COG: NMA0704 COG0720 # Protein_GI_number: 15793683 # Func_class: H Coenzyme transport and metabolism # Function: 6-pyruvoyl-tetrahydropterin synthase # Organism: Neisseria meningitidis Z2491 # 1 140 1 140 140 272 92.0 2e-73 MKITKIFTFDSSHMLDGHDGKCQNLHGHTYKLEITVSDDPVRGGPKDGMVMDFTDLKAAV KKHITDPFDHAFIYHGGNDRECQIAALLEGWNMKTLCLPCRTTAENMAVEMYDRLKNAGL KVCSVKLWETPTSCAEYEGE >gi|289656338|gb|ADEA01000029.1| GENE 15 16419 - 17081 919 220 aa, chain - ## HITS:1 COG:no KEGG:SSA_1238 NR:ns ## KEGG: SSA_1238 # Name: not_defined # Def: hypothetical protein # Organism: S.sanguinis # Pathway: not_defined # 8 219 37 249 250 258 57.0 1e-67 MKFPLGIKVPFSTRMTVVRLNDGGLWCHSPVEPAPELLRQIDALGEVRHLVSPNKIHYAH IAAWKRHYPQALAWASSGVRERAASQHIAVCFDADLGAAAPPQWADDLTQMPFAGSAAME ETVFFHRASRTLILADLIENFETAKFPNRFWAGVMKLTGIAYPDGKAPADWRATFKDKTA ARACLKQMLDWQPEKIILAHGRCYETGGTDELRRAFRWLD >gi|289656338|gb|ADEA01000029.1| GENE 16 17492 - 17605 134 37 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTVLDSHELEQVSGGIWGALVVGGIIVACVVAAPPAY >gi|289656338|gb|ADEA01000029.1| GENE 17 17633 - 18292 1014 219 aa, chain - ## HITS:1 COG:NMA0702 KEGG:ns NR:ns ## COG: NMA0702 COG0603 # Protein_GI_number: 15793681 # Func_class: R General function prediction only # Function: Predicted PP-loop superfamily ATPase # Organism: Neisseria meningitidis Z2491 # 1 219 1 219 219 433 95.0 1e-122 MQNRQALVIFSGGQDSTTCLIQAIQTYGRENVQAITFQYGQRHAVELERARWIAQDLGVK QTVLDLSLMQQITHNALMDDTAAIETASDGLPNTFVDGRNALFLLYAAIYAKGQGIRHII AGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYAFQIHTPLMYLTKAQTWALADEMGALDY IREQTHTCYNGIVGGCHECPSCVLRERGLAEYLESKKAV >gi|289656338|gb|ADEA01000029.1| GENE 18 18412 - 19011 832 199 aa, chain + ## HITS:1 COG:PM2000 KEGG:ns NR:ns ## COG: PM2000 COG0558 # Protein_GI_number: 15603865 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylglycerophosphate synthase # Organism: Pasteurella multocida # 1 196 1 196 218 246 65.0 2e-65 MSIYALKPKFQNLLRPLVRRLYQKGVTANQVTLAACAVSVAVGLLLSLGAQVPALFWLLP VWLFVRMALNAVDGMLAREFGQQSALGGYLNEITDVAADAALYLPFAFIAPFDGAQIGLF VWLAAMTEFCGVLGQVHGNGRRYDGPFGKSDRAFFIGVLAVWYAVAGSFHAIFYVVMWLA CAALVYTCYKRVVNGLKAV >gi|289656338|gb|ADEA01000029.1| GENE 19 19057 - 19677 1021 206 aa, chain + ## HITS:1 COG:PM1879 KEGG:ns NR:ns ## COG: PM1879 COG3647 # Protein_GI_number: 15603744 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Pasteurella multocida # 4 201 5 202 205 266 65.0 1e-71 MQKTSHIIPLLLTVFIAALIAWSGINPSDRAVWYAEILPVSTVFVALIATYRRFRFSNLA YVFMSFWLIMHTVGAHYTFADVPFDWANRLLAPFLGEGRNHFDRVGHYIIGFYAYPMAEW LLRRKICRPALALFFSLFFIMSVAAVYEIIEWQYAVIEGGEAGLEVLGSQGDLWDAQKDM LADTLGALTSLAVFVSARPDKRLGSR >gi|289656338|gb|ADEA01000029.1| GENE 20 19834 - 21576 2516 580 aa, chain + ## HITS:1 COG:PA2540_1 KEGG:ns NR:ns ## COG: PA2540_1 COG2267 # Protein_GI_number: 15597736 # Func_class: I Lipid transport and metabolism # Function: Lysophospholipase # Organism: Pseudomonas aeruginosa # 4 267 5 271 274 360 66.0 3e-99 MQEQQKHFATQDGTELFYRYRPAADGSADKAIVLFHRGHEHSGRMMFVADELGFDDFAYF AWDARGHGHSPGERGDSPSIGTSVADVDDFIRHIQSEYGIKPENICVIAQSVGAVLVSTW LHDYALKIRCAVLASPAFKVKLYVPFARTGLKIMQKWRGNFFVNSYVKAHYLTHNQERQT SYDNDSLITRAISVRILLGLYEAAERVVADAQAITTPVQLLISGSDWVVHHKPQHDFYNR LGSRIKERHILPGFYHDTLGEQNREIAFVEMRRFIRERFNQPLYQVDLTQAHLHGESRRE ADELATPLSICSPRGAFWAVYRASLDLGARWSEGLKIGKETGYDSGSTLDYVYRNQPQGS NAFGVAVDKHYLNAIGWRGIRQRKINIGKAIQTASAKLREAGKPVHVLDIASGHGRYVLD ALTADTLPDSVRLRDYSPINVEAGRKLIAERGLQDTVTFDEVNAYDRANYQDFQPRPTLG IVSGLHELFADNDLILNSLYGFGDAIETGGYLIYTGQPWHPQLEMIARALTSHKAGSPNW VMRRRSQQEMDQLVEKAGFEKIHQWIDEDGIFTVSLAVKK >gi|289656338|gb|ADEA01000029.1| GENE 21 21637 - 21999 587 120 aa, chain - ## HITS:1 COG:no KEGG:NGO1981 NR:ns ## KEGG: NGO1981 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae # Pathway: not_defined # 1 117 63 185 186 66 32.0 3e-10 MKLLSVVTAAALAAVSLSAVAAPAGMVSYTCDNGKQLNALYEFDRQGRAVNVAVNAAGTQ ANLTVNKKQSDSTGTTFTNRRGYSLSAGYIDKNTHTTSDVVGLTAPGGRFIVKNCSPVSN >gi|289656338|gb|ADEA01000029.1| GENE 22 22239 - 23729 641 496 aa, chain + ## HITS:1 COG:PA2539_1 KEGG:ns NR:ns ## COG: PA2539_1 COG0671 # Protein_GI_number: 15597735 # Func_class: I Lipid transport and metabolism # Function: Membrane-associated phospholipid phosphatase # Organism: Pseudomonas aeruginosa # 9 365 1 326 336 199 39.0 1e-50 MKPAFKTSLLKLALIGALFYTSYGLSNHYAASLAYVPEIAFAWERGIPFWAWTIVPYWSL NLMYAAAFFLCRNACEQNRYVARLLAAQIVATICFMLFPLHFGWPKPPTDGLWGWLFDSL VAFDLPYNQAPSLHIALAVIVGAFYWMRFPKIRLPIFLWQSLIALSVLTTYQHHFIDVPT GALLGWLVLWAIPQHGVSPFRRPFGTQGRLKTSEASFCEAKTNAVSFARTSEASFREAKT SPETRSREIKIAMLYLAGAVLSALPSLFGGAWLWMLWVSVSLSVVAFAYLTGNAAVFQKQ ADGRLSAAATILLLPYLAGVRLNMAHWLSGKVKTAQVRDGVWIGSVSGISDDLSAVLDVC AEYPCPRYRGACRVLPLLDMVAPSENDLVQAALLLEALRRQHGKVLTCCALGYGRSAAVV LTWLLVYGGCRDLAQATAELKQARPQMMLPPETAKAVEAAAGCLKTSAVSFAKTSEASSS EAKTNKASFCDANRDS >gi|289656338|gb|ADEA01000029.1| GENE 23 23864 - 24685 792 273 aa, chain + ## HITS:1 COG:MA1162 KEGG:ns NR:ns ## COG: MA1162 COG1266 # Protein_GI_number: 20090028 # Func_class: R General function prediction only # Function: Predicted metal-dependent membrane protease # Organism: Methanosarcina acetivorans str.C2A # 5 268 7 268 289 137 32.0 2e-32 MTKSYRPVAFYTLSLLIPWTLWFAAAYISHRPDAVEYQWAQAALGLAGLFAPMLVAAFLL YKQPKLWTDAKHRLFRLTGFPKRYLLAAALLGPVTLVLAQLISIAFGHSWAQFHISGHPS FTSALLSPWFMLLIAPVAEELAWHSYGTDALTARRSLFVASLLFTVYWAFWHMPLAFVKG YYHSQIVSEGALYTVNFVVSMFVFVLLMNWLYAKSGRSIAVATIFHLCANLGNEIFATHP VSKVIQTAILSAVAIYILIAEKNLFLGKPVPSR >gi|289656338|gb|ADEA01000029.1| GENE 24 24753 - 25127 410 124 aa, chain + ## HITS:1 COG:no KEGG:NT05HA_1516 NR:ns ## KEGG: NT05HA_1516 # Name: not_defined # Def: hypothetical protein # Organism: A.aphrophilus # Pathway: not_defined # 4 115 2 113 121 77 40.0 2e-13 MDNSTDSLITARLLATARYTAVFNALLFVLSAQRGGAWSAVQLVLAAALLYYHIRIEFDR RVFQDFADGRYTPAAFDQALRQTGLRRVSDDPSMPQRVAGAIALWRKSLYLTAAQSAVFL IQIL >gi|289656338|gb|ADEA01000029.1| GENE 25 25132 - 25818 1055 228 aa, chain + ## HITS:1 COG:PM2001 KEGG:ns NR:ns ## COG: PM2001 COG0204 # Protein_GI_number: 15603866 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Pasteurella multocida # 9 210 2 202 209 227 53.0 1e-59 MKNFLKKQLAWLTDQALCLSVSFLTGVRPKSPRELAFNPQQKVYYANHGSHGDFLLVWIS LPRRWRLSTRPVAGSDYWLTNKLKRFIIQNVFNALLIPRHSDNPQSITEQMNHALQAGDS LIIFPEGTRNTDENEILLPFKSGIYHLAKSKPDTEFVPIWIDNINRVLPKGKVLPVPLLC EVHIGEPLTLREDEDKETFLTRTREALLALGSSENECNESQQNKGAAS >gi|289656338|gb|ADEA01000029.1| GENE 26 25815 - 26804 1356 329 aa, chain + ## HITS:1 COG:PM2002 KEGG:ns NR:ns ## COG: PM2002 COG4589 # Protein_GI_number: 15603867 # Func_class: R General function prediction only # Function: Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase # Organism: Pasteurella multocida # 26 327 6 308 309 332 59.0 7e-91 MSFVNTSGQIITEQTAAHLTPQAGYIFTGVFAILIFASVIGQWLKRKNGADNATISNLNA RIYAWWLMTLVLLVAFWFGKTGTVVLFFLISFAALREFMTLVYRRRSDYYSMVVCFYLLL PVQYYFVYDGWYGMFSIFIPVYGFLVLPIIASLSGQTAHFLERAAKTQWMSMICIFCLSH VPALMFLNLDDFDSSGNILLLMFLIFVVQASDVLQYVWGKLVGGAKIMPSLSPSKTISGT VGGILSATALAALLSPMTPFSHGQAAAIGFVICLMGFFGGLVMSAIKRDYGVKDWGNMIR GHGGMLDRVDSICFAAPVFFHIVRYYWHG >gi|289656338|gb|ADEA01000029.1| GENE 27 26995 - 28356 1093 453 aa, chain - ## HITS:1 COG:NMB1723 KEGG:ns NR:ns ## COG: NMB1723 COG2010 # Protein_GI_number: 15677569 # Func_class: C Energy production and conversion # Function: Cytochrome c, mono- and diheme variants # Organism: Neisseria meningitidis MC58 # 1 315 1 315 365 558 84.0 1e-158 MNTTSQFTSNFWNIYIAVIVLFSFIGLAWLLLSQNVVKPLKKGEEVKTTGHNWDGIEEYN NPLPRWWFWLYVCTWLFGIGYLIMFPGIGDYKGYWGWSSHGQYEEEMQKANEQYGKLYAK FAKMPIEQVAKNPEARQIGKNMFDTYCIQCHGSDAKGSKGFPNLTDNDWLWGGEPEKIHE TIEKGRIATMAAWGPALGEERVKDVANYVMSLSKPKDQYDQERAARGKALFSGPPANCFT CHGDKGQGIQGLGPNLTDNIWLWGGTQKAIIETITNGRHSQMPAWGGFLDKDKLHIMTAY VWGLSNKDGKAPTKKAEPAPVAAPAPTASPAEKEAAAPADKAASSADNKAGSATTTEAKP ADKAEAAPVAKADGKKVYEASCKSCHGNAIPGIPHVGTKADWAPRIKQGKETLHKHALEG FNAMPAKGGNSGLSDDEVKAAVDYMANESGAKF >gi|289656338|gb|ADEA01000029.1| GENE 28 28387 - 28554 149 55 aa, chain - ## HITS:1 COG:NMA1978 KEGG:ns NR:ns ## COG: NMA1978 COG4736 # Protein_GI_number: 15794860 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Cbb3-type cytochrome oxidase, subunit 3 # Organism: Neisseria meningitidis Z2491 # 1 53 1 53 56 61 66.0 3e-10 MDANWARSLFTLWVFVSFILVIYIVFNRRNKKNYDDAANSIFDNNDDNTSDKNGR >gi|289656338|gb|ADEA01000029.1| GENE 29 28559 - 29170 795 203 aa, chain - ## HITS:1 COG:NMB1724 KEGG:ns NR:ns ## COG: NMB1724 COG2993 # Protein_GI_number: 15677570 # Func_class: C Energy production and conversion # Function: Cbb3-type cytochrome oxidase, cytochrome c subunit # Organism: Neisseria meningitidis MC58 # 1 203 1 203 203 385 90.0 1e-107 MKLQHLVEEKVGFLIVFTVLVISVGLLIEAVPLFFTKAVTQPAPGVKPYNALQVAGRDIY VREGCYNCHSQMIRPFRAETERYGHYSVAGESVYDRPFQWGSKRTGPDLARVGGRYSDEW HRIHLLNPRDVVPESNMPAFPWLARNKVDAEATVRHMKALRSVGTPYSDEEIEKAPEALE NKSELDAVIAYLQGLGLALKNVR >gi|289656338|gb|ADEA01000029.1| GENE 30 29196 - 30632 1367 478 aa, chain - ## HITS:1 COG:NMA1980 KEGG:ns NR:ns ## COG: NMA1980 COG3278 # Protein_GI_number: 15794862 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Cbb3-type cytochrome oxidase, subunit 1 # Organism: Neisseria meningitidis Z2491 # 1 478 5 481 481 828 92.0 0 MDTQTYNYKVVRQFAIMTVVWGIVGMLVGVIVAAQLFAPSLDLSDVGPWFHFGRLRPLHT NAVIFAFGGCGLMGTSYYVVQRTCNVRLFGGNWLPAFTFWGWQAVIVAAAISLPMGFTQA KEYAELEWPIDILIALVWIAYAVVFFGTIAKRKVKHIYVANWFYGGFILAVALLHIVNNI SVPAGFMKSYPVYSGAIDAMVQWWYGHNAVGFFLTAGFLGMMYYFVPKQAARPIYSYRLS VVHFWALIFTYMWAGSHHLHYTALPDWTQSLGMVLSLILFAPSWGGMINGIMTLSGAWDK LRTDPVLKFLIVSLSFYGMSTFEGPMMSIKTVNSLSHYTDWTIAHVHAGALGWVGFVTIG SVYYMIPRLFGKNEMHSTKLIEAHFWIATIGVVLYIAAMWIAGVYQGLMWGSLNKDGTLT YSFVESVKHTMPYYQIRFVGGMLYLSGMCIMAYNVYRTAVGGRPVDAEIPAVSQAQHH >gi|289656338|gb|ADEA01000029.1| GENE 31 30958 - 32715 1652 585 aa, chain + ## HITS:1 COG:NMB1726 KEGG:ns NR:ns ## COG: NMB1726 COG3975 # Protein_GI_number: 15677572 # Func_class: R General function prediction only # Function: Predicted protease with the C-terminal PDZ domain # Organism: Neisseria meningitidis MC58 # 1 582 1 581 582 890 72.0 0 MINYTLSPNLLSRQWEITLSFIKNNELPTEISLPNWVPGSYLIRDFSRHITEIRAFCDGI PAELTQIDKNTWHTAAISGEWRICYTVYAFDLSVRGAFLTTERGFFDGACIFLKVKGYEH EAHRVALSQLPEHWRIATTLPTVGEHVFQAVSYMDLIDHPVELGNIEFLSFEAAGIPHRI ALSGFYHPFDRDRLVSDIRKICETELAAFPSPAPFDQYLFLLHVGDNIYGGLEHIDSTAL LADRNSLPPFEMGAANDAYTQLLGLFSHEYFHAWNVKSIKPEAFVPYHLDRENYTEQLWA FEGITSYYDDLFLARSGCISPEAYLNLLAQGITRVQQTKGRLKQTLAESSFTAWNKFYKQ DENSPNAIVSYYQKGALAALCLDLLIRSKSTGRHSLDSVMRQHYRDWCATRQGIPEKQWQ VRCQEITGLNLEDFFQTALYSTRDLPLAECLATAGVALTWRALPHSHGGGLADAKTDSFP PAPDFGARFKQNGDGATLTHVFNGGSAENAALCPQDKIIALNGFACTDLALQWSQQPVGS QVHVHFFRTGVLHETVITVEEAGAETALLAVSDRQLLEQWLFDRP >gi|289656338|gb|ADEA01000029.1| GENE 32 32762 - 33196 452 144 aa, chain + ## HITS:1 COG:NMB1727 KEGG:ns NR:ns ## COG: NMB1727 COG3453 # Protein_GI_number: 15677573 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 1 140 1 140 142 170 59.0 9e-43 MAILNLSENLYISPQLSEADAAQAAKLGIKSVICNRPDGEEAGQPEAAQVRQWLEQAGIA AFRHQPVTAPAITDADIDMFHKLLAELPPPVLAYCRTGTRCSLLWGYRQIQNGSSVAEVK TASARAGVDLTNFEARLEAAADNR >gi|289656338|gb|ADEA01000029.1| GENE 33 33292 - 33414 66 40 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPEWLGIVLWIAAGLAAVLGVFAVVGFLRFIVMSAYNKDF >gi|289656338|gb|ADEA01000029.1| GENE 34 33646 - 34086 717 146 aa, chain - ## HITS:1 COG:NMA1983 KEGG:ns NR:ns ## COG: NMA1983 COG0848 # Protein_GI_number: 15794865 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport protein # Organism: Neisseria meningitidis Z2491 # 1 143 1 143 144 206 79.0 1e-53 MAFGSMNSGDDAPMSEINVTPLVDVMLVLLIVFMITMPVLTHSIPLELPTASEQAAKKEK QPTDPLRLTIGADGSYYFGTESVSKVSIEGVAEKLKTAKAEKEDLIVAIAADKSVEYDYV NKALEAAREAGISKIGFVTETKSVAK >gi|289656338|gb|ADEA01000029.1| GENE 35 34090 - 34749 1060 219 aa, chain - ## HITS:1 COG:NMA1984 KEGG:ns NR:ns ## COG: NMA1984 COG0811 # Protein_GI_number: 15794866 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport proteins # Organism: Neisseria meningitidis Z2491 # 1 219 1 219 220 313 72.0 1e-85 MNLALVFQSGDFVLISVFIILVIMSIVTWSIIILRAIRLRKAKNGNAAVKKLVLASFTLN EAVQKAKSVDSPMGRLTEEAVKAHQNYRQSDAKLLANALPLNEYLVTQIRNSMSQIMRQF DGGMTSLASIGATAPFIGLFGTVWGIYHALINISQSGQMSIAAVAGPIGEALVSTAAGLF VAIPAVLAYNFLNRSTKTLSQDMDAYAHDLHVRLLNQKD >gi|289656338|gb|ADEA01000029.1| GENE 36 34834 - 35067 246 77 aa, chain - ## HITS:1 COG:NMB1730 KEGG:ns NR:ns ## COG: NMB1730 COG0810 # Protein_GI_number: 15677576 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protein TonB, links inner and outer membranes # Organism: Neisseria meningitidis MC58 # 2 75 206 279 280 75 51.0 3e-14 MIPTPPYPQLSEENGEEGTVVVNVLVAPGGNIVSVTKVKGSGYPRLDRAAMNAARVGSYK TKGWMNFRGTVVFKITN Prediction of potential genes in microbial genomes Time: Thu May 26 13:45:08 2011 Seq name: gi|289656337|gb|ADEA01000030.1| Neisseria sp. oral taxon 014 str. F0314 cont1.30, whole genome shotgun sequence Length of sequence - 31740 bp Number of predicted genes - 29, with homology - 26 Number of transcription units - 15, operones - 7 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 584 365 ## gi|298370161|ref|ZP_06981477.1| TonB protein - Prom 617 - 676 5.1 - Term 775 - 816 -0.9 2 2 Tu 1 . - CDS 953 - 1405 526 ## COG1959 Predicted transcriptional regulator - Prom 1492 - 1551 5.4 + Prom 1451 - 1510 5.0 3 3 Op 1 . + CDS 1585 - 1959 460 ## NMCC_1708 hypothetical protein 4 3 Op 2 . + CDS 2078 - 3235 1626 ## COG3213 Uncharacterized protein involved in response to NO + Term 3256 - 3315 19.0 - Term 3248 - 3303 16.1 5 4 Tu 1 . - CDS 3312 - 4328 983 ## COG1087 UDP-glucose 4-epimerase - Prom 4361 - 4420 7.8 + Prom 4364 - 4423 9.1 6 5 Op 1 . + CDS 4464 - 4694 281 ## gi|298370166|ref|ZP_06981482.1| hypothetical protein HMPREF9016_01501 7 5 Op 2 . + CDS 4702 - 6141 950 ## COG1020 Non-ribosomal peptide synthetase modules and related proteins 8 5 Op 3 . + CDS 6144 - 7514 1087 ## LKI_08620 hypothetical protein + Term 7516 - 7579 12.9 - Term 7629 - 7672 13.3 9 6 Tu 1 . - CDS 7693 - 11322 1758 ## COG1887 Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC - Prom 11521 - 11580 5.7 + Prom 11588 - 11647 3.4 10 7 Tu 1 . + CDS 11748 - 11918 99 ## + Prom 12082 - 12141 6.8 11 8 Op 1 4/0.000 + CDS 12180 - 13358 720 ## COG1596 Periplasmic protein involved in polysaccharide export 12 8 Op 2 3/0.000 + CDS 13382 - 14557 883 ## COG3524 Capsule polysaccharide export protein 13 8 Op 3 26/0.000 + CDS 14557 - 15354 628 ## COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component 14 8 Op 4 . + CDS 15351 - 16001 772 ## COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component - Term 16010 - 16062 18.1 15 9 Tu 1 . - CDS 16067 - 16522 294 ## COG4968 Tfp pilus assembly protein PilE - Prom 16546 - 16605 9.1 16 10 Op 1 13/0.000 - CDS 16650 - 18752 193 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 17 10 Op 2 . - CDS 18749 - 20044 1193 ## COG0845 Membrane-fusion protein 18 10 Op 3 . - CDS 20047 - 20235 135 ## gi|298370177|ref|ZP_06981493.1| hypothetical protein HMPREF9016_01512 - Prom 20303 - 20362 6.9 - Term 20635 - 20683 2.9 19 11 Op 1 . - CDS 20892 - 21083 282 ## gi|298370178|ref|ZP_06981494.1| hypothetical protein HMPREF9016_01513 20 11 Op 2 . - CDS 21180 - 21344 58 ## 21 11 Op 3 . - CDS 21366 - 21473 103 ## - Prom 21566 - 21625 4.5 - Term 21530 - 21567 8.3 22 12 Tu 1 . - CDS 21708 - 21881 306 ## gi|298370179|ref|ZP_06981495.1| hypothetical protein HMPREF9016_01514 + Prom 22141 - 22200 9.8 23 13 Tu 1 . + CDS 22297 - 23619 1711 ## COG1538 Outer membrane protein + Term 23717 - 23758 10.4 + Prom 23731 - 23790 4.7 24 14 Op 1 16/0.000 + CDS 23825 - 24892 1360 ## COG1088 dTDP-D-glucose 4,6-dehydratase + Prom 25077 - 25136 1.9 25 14 Op 2 13/0.000 + CDS 25163 - 26062 1301 ## COG1209 dTDP-glucose pyrophosphorylase 26 14 Op 3 . + CDS 26270 - 26809 651 ## COG1898 dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes + Term 26825 - 26858 1.1 + Prom 26847 - 26906 2.7 27 15 Op 1 . + CDS 26931 - 28076 603 ## ESA_03357 hypothetical protein 28 15 Op 2 5/0.000 + CDS 28094 - 30118 1741 ## COG3563 Capsule polysaccharide export protein + Term 30255 - 30297 3.1 + Prom 30190 - 30249 4.5 29 15 Op 3 . + CDS 30331 - 31695 1366 ## COG3562 Capsule polysaccharide export protein Predicted protein(s) >gi|289656337|gb|ADEA01000030.1| GENE 1 2 - 584 365 194 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298370161|ref|ZP_06981477.1| ## NR: gi|298370161|ref|ZP_06981477.1| TonB protein [Neisseria sp. oral taxon 014 str. F0314] # 1 194 11 204 205 163 99.0 4e-39 MVAAVALLHVGLMSLLWRAHVPSPVEVEHIEFVDLGDFGGGDGNAEGAGSPAPAENPAPL QPQPELPKPKPKPKKVEPPKPKPVERPKPVIKPVVTKKADADIEQPKEKPKPVEKPIPQP EEKPVEPPKPVEKPAPEFKPAAESPTTDTYVRSSRAGAAGGKEGGKGQGGEGGGSGKGFK GEGTGRGLGDGPGS >gi|289656337|gb|ADEA01000030.1| GENE 2 953 - 1405 526 150 aa, chain - ## HITS:1 COG:NMA2048 KEGG:ns NR:ns ## COG: NMA2048 COG1959 # Protein_GI_number: 15794926 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Neisseria meningitidis Z2491 # 1 147 1 147 147 251 82.0 3e-67 MYLTQHTDYGLRVLIYTAINDDALVNISTIAETYNISKSHLMKVVTALVKGGFLTSVRGK GGGLKLAEPPEKINIGSVVRHLEPMQLVECMGRDNNCLITPSCRLADILSGGIKAFLNYL DGFTLSDLLNKPTYDLLYMPKVDISVERTN >gi|289656337|gb|ADEA01000030.1| GENE 3 1585 - 1959 460 124 aa, chain + ## HITS:1 COG:no KEGG:NMCC_1708 NR:ns ## KEGG: NMCC_1708 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_053442 # Pathway: not_defined # 1 120 1 120 122 143 71.0 2e-33 MKPLKRHPALIELSRDHHRSLSLCVRLLRTPAESHRAELEPHFPELLEHFLEEETLFAPY WPRIDNALRERFETDHAKLRTMIAAPEHTSETWNKDFATTLRDHARFEERELFPAVEAYL DTPE >gi|289656337|gb|ADEA01000030.1| GENE 4 2078 - 3235 1626 385 aa, chain + ## HITS:1 COG:NMA2046 KEGG:ns NR:ns ## COG: NMA2046 COG3213 # Protein_GI_number: 15794924 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in response to NO # Organism: Neisseria meningitidis Z2491 # 6 385 21 400 400 505 75.0 1e-143 MSTLFKHPIWAMAFRPFYSLAALYGALSILLWGFGYQGTPELSGFYWHAHEMIWGYAGLV VIAFLLTAVATWTGQPPTRGGALAGLTAFWLAARIAAFIPGWGAVASGIAGTVFFWYGAV CMAIPVYRSRNKRNYIAVFAIFVLGGTHVAFHRHLNPLDGMALLNGLVAGLIMVAAFIGL IGTRIISFFTSKRLNIPQVPSPQWLALSALVLPMIAAMLTAHQFLLPLAALFTFAAGIIN LIQVCRWWNNAILKEPMLWILFAGYFFTALGLTAIGLSHFKLQLLNLGVHLIGVGGIGVL TLGMMARTALGHTGHPIYPAPKPIPLAFWLMIAATLIRILATFVSGTAYTHSIRCSAALF AASLLLYAWRYIPWLIKPRADGKAG >gi|289656337|gb|ADEA01000030.1| GENE 5 3312 - 4328 983 338 aa, chain - ## HITS:1 COG:NMB0064 KEGG:ns NR:ns ## COG: NMB0064 COG1087 # Protein_GI_number: 15676001 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose 4-epimerase # Organism: Neisseria meningitidis MC58 # 3 338 4 339 339 611 85.0 1e-175 MTIFVTGGTGFIGSHTVISLLQSGFDVVILDNLCNSSAKILPRLQQISGKSVPFYEGDIR DREVLRRIFAEHDIDSVIHFAGLKAVGESVAEPMKYYDNNVSGSLVLAEEMARAGVFNIV FSSSATVYGDPGKVPYAEDMKPGDTTNPYGTSKAMVERILTDIQKADPRWSVILLRYFNP IGAHQSGLIGEHPNGIPNNLLPYICQVAGGKLPYLSVFGDDYPTPDGTGMRDYIHVVDLA EGHVAAMKAKSHVPGVHLLNLGSGRAYSVLEIVRAFEAASGLTIPYQIKPRREGDLACVY ADPTYTKQQTGWETKRDLTQMIEDAWRWVSRNPNGYGD >gi|289656337|gb|ADEA01000030.1| GENE 6 4464 - 4694 281 76 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298370166|ref|ZP_06981482.1| ## NR: gi|298370166|ref|ZP_06981482.1| hypothetical protein HMPREF9016_01501 [Neisseria sp. oral taxon 014 str. F0314] # 1 76 1 76 76 117 100.0 2e-25 MSITNEILTLVSKAAQKQVSEHEELLASGLIDSISAMDLMLSIQEKFNVEIPFEQVVNIF ANTSNIIEFVERNYKG >gi|289656337|gb|ADEA01000030.1| GENE 7 4702 - 6141 950 479 aa, chain + ## HITS:1 COG:BS_dltA KEGG:ns NR:ns ## COG: BS_dltA COG1020 # Protein_GI_number: 16080901 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Non-ribosomal peptide synthetase modules and related proteins # Organism: Bacillus subtilis # 25 474 19 500 503 267 32.0 4e-71 MKSITDFSSLEDYLAYLFNNTSGIAIANSQENCSWEQLLKRMDEFLNKYKKIANINKNIP LIVHGHKQINFVIAIYACLLNKIPFIPVDSIYPEKRLEHICNLSKAQYVYRAENDSFEKK NDEEHELSERDLAYIMFTSGTTGQPKGVQIGREAVFNLMKWMTMQLNLAKPNIFMNQAPF AFDLSMYEVFGNLAYGGCIVLNSREDIANSSTWTDFLAKQQISTWVSTPSFAMQQLLNPK LNQQNIPSLKEFLFCGEKLGKPVVKMIFQKFPQARIINTYGPTEATVATTYIDITREMLE AEEELPVGYAVLNSDLNIVDEEIWISGIHVMRGYLNNEVENTKRLIIHDNETRTYKTGDY GFVKDNVFYVLGRRDEQIKLNGYRIELSEIEEKILDLKQFGFENAAVIALKRDTGTVLRL VCFYTSKEATESTIIKEALAKNLPSYMMPSEFIKIDEIPVSTNHKTDKKALLEKYQQGL >gi|289656337|gb|ADEA01000030.1| GENE 8 6144 - 7514 1087 456 aa, chain + ## HITS:1 COG:no KEGG:LKI_08620 NR:ns ## KEGG: LKI_08620 # Name: not_defined # Def: hypothetical protein # Organism: L.kimchii # Pathway: not_defined # 139 356 9 223 324 108 34.0 4e-22 MDLYQIQKNILQKAKIDSRKVSAWIYNDQSIVFDFLLNDYFVSISYTVLGQTFNFIERNK SKVSKISSFPKFLKYISEIYGSYPQSVNQANTVLSFKFAEADWAKIEAKFSEILEVTSIY FGSKLCYILNVERDNGINLAEYLDKPEVEYIGIQGNSNEFFLSYARNHGLNDYVYELNSK GFLAVEHKMGVSVFRRVNKHSYKDLLAYFPDSFHELENVIYTVEAPKVLNTNKKNLLVLF SYTNKSNENMVDRYYSHPFPFISNSIMPNTYIIRMADVSDAFGSHGLNTKFDENIEANIQ NFIKSLMNIYSVDKENVVICGASSGGTGAVYHGLIGGYKTFAIDPFLGNHKYYGGKDPLY LHSIRTPIGEIFKKLPNEIDHNLENQVVISSAKVSEFYPDIKELKKALPTITLCEFDFEK IQKHLDFSGNTVFLSNTIINNLLLGIHITDSDINLN >gi|289656337|gb|ADEA01000030.1| GENE 9 7693 - 11322 1758 1209 aa, chain - ## HITS:1 COG:BS_ggaB_2 KEGG:ns NR:ns ## COG: BS_ggaB_2 COG1887 # Protein_GI_number: 16080621 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC # Organism: Bacillus subtilis # 471 839 19 380 381 214 35.0 1e-54 MYNKRSVQIKKYLPVKYNGTQQYTVVSAVYNVEKYLNDYFSSLTKQSLNFKKHIQLILVD DGSTDRSAEIIKQWQAKFPKNIHYFYKENGGQASARNLGLQYTQTEWVVFTDPDDYLHPD YFKSVDTQISHHPSAVTVATNIKFFFENQNIVKDSHPLKFRFNKTQVVDVAKLDKFINMS AASTFFKVSHIKKQGLAFNHNVKPNFEDGKFIADYLLGLQDAKAVFDKDAVYFYRKRESG TSTLDTSWQKVEKFSNVFEYGFLPMLQNYKNRLGSVPSSIQKTALYDMAWYIQQLLNRPE RLELLNAEQKAHFYALMKQVFNYIDEKNIMEFGLAGIWLFHKVGMLGMFKQSEPPFQIAY IENIDHERKQFLVSYFTHFDLPYSVQANGDDIIPAYTKSVINNLNEQLFVYEKRLWIPYG GVAENAKINILLNQKPMRISIKGKTFMHGITLNELTGLFMPSEKYLSDGSWLLMDRETKA DDNAEHFYRYMMQHHPEQTCYFVLNKTAPDWDRLKQEGFKLVEFGSSEYEHHLRKAEKII SSHLEKHINNYFGDLYEHSKKFVFLQHGVTQNDLSAWFNTKTNLHCFIATATPEYQTIIA NPSRYKLTEKEVVLAGFPRYDNLVSKNIAQSKQILIMPTWRNNIVGQNIGSGSNTRAINT DFMKTSYAQHWFNFLHSKNLKQLAEKFNYEITFAPHPNIEPYLDLFDIPDYIQVWRGASA TESIQNLFSQSSILITDYSSVAFDMAYLNKSIIYYQFDQEEFFSGAHTLQRGWFDYENSG FGPVTLTEQETFDELENILKTGLKPEYLERIHATFPFQKGGNCERVYQAIMALDQPETAD SLPILQDMITQAENHHAWSLAASRIQALLDAGRLNAEESADYRQRYLNALFANKQFDVLQ NLLPDYPDIADYWQAKMDLCIGNAVKGAEFFAVHDQIGTQEDILAALLAASFNQEQTLSE KLFARIGTNLPDSYKPLLTVAQKLLEQNYFTALALLRTYIDSLDNHEKSRLKPELLASYL CMKLGNLQGAHQYLVAFEKHTQNDPSCRIAIARLAKLRGDSEKLFTQLNRAFEENLLLIP EDLTVNYLKKMYDTGNTDGEAYLLAQLRQKYPENQSLALYEAEKLSKNQDWESVAKILAD FAQASPEAMYLYITALCRLKNHKVAQRYFDGLALQNTTAYWKLAAEVAEAKEDKTLQAEC LQKQLACLE >gi|289656337|gb|ADEA01000030.1| GENE 10 11748 - 11918 99 56 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLFKEALSVGVTPLSRILALFCGKIGLIFFLSLRIGIVHPNKNDIDEHYEHPTQSQ >gi|289656337|gb|ADEA01000030.1| GENE 11 12180 - 13358 720 392 aa, chain + ## HITS:1 COG:NMB0071 KEGG:ns NR:ns ## COG: NMB0071 COG1596 # Protein_GI_number: 15676007 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protein involved in polysaccharide export # Organism: Neisseria meningitidis MC58 # 5 392 5 391 391 567 76.0 1e-161 MAPKEYFFKNSLFLLAYGLLTACSSIPSAGPSARKIVALNQQNSNAQVPAVELIEVNDAV SKSLYQAQTNQSFAQLGDGYASVGAINVGDMLDITVWEAPPAVLFGGALSSVGSGNAQQT KLPDQMVTSAGMISVPFIGDISVAGKTPVQVQNMIRGRLKKMANQPQVIVRLVQNNAATV SVIRAGNSVRMPLTTAGERVLDAVAAVGGSTANVQDTNVQLTRGNQVKTVALEDLVSHPR QNILLRRGDIVTMITNPNSFTSMGAVGRTQQIGFSVKGLSLAEAVGRMGGLQDYRADARG VFVFRYTPVAELPSEKQGKWTAQGYGSEAEIPVVYRLNLSDAHSLFWMQRFPIKNKDVVY VSNAPLSEVQKFLSFVFSPVVNSANSINNLTN >gi|289656337|gb|ADEA01000030.1| GENE 12 13382 - 14557 883 391 aa, chain + ## HITS:1 COG:NMA0197 KEGG:ns NR:ns ## COG: NMA0197 COG3524 # Protein_GI_number: 15793222 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Capsule polysaccharide export protein # Organism: Neisseria meningitidis Z2491 # 1 391 1 387 387 598 84.0 1e-171 MSEQFPVAESEIKTEPALSNPLPNGKKNILRKISPLLWMTVIIPTVCSTVYFGLFASDQF TSQSSFVVRSPKSQSSLNGLGAILQGSGFSRSQDDIYTVQEYMQSRSALEALSKKMPVRK FYETKGDIFSRFNGFGFQGEDEAFYQYYKDKVSIHFDSISGISNLNVTSFDAGESQKINN ALLKQGEVLINQLNERARKDTIRYAEEVVASAEEQVKEASAELTKFRISNGIFDLKAQSD VQMNLVSKLQDELIVIQTQLDQVKAVTPENPQIPGLIAREKSLRREITQQMKAISGGNES SLSNQAAEYQRVYLENELAEKQLAAAMTSLESAKAEADRQQLYLEVISQPNKPDLAHEPK RIYNIVATFIIGLIVYGIASLLSASIREHKN >gi|289656337|gb|ADEA01000030.1| GENE 13 14557 - 15354 628 265 aa, chain + ## HITS:1 COG:NMB0073 KEGG:ns NR:ns ## COG: NMB0073 COG1682 # Protein_GI_number: 15676009 # Func_class: G Carbohydrate transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: ABC-type polysaccharide/polyol phosphate export systems, permease component # Organism: Neisseria meningitidis MC58 # 1 265 1 265 265 403 81.0 1e-112 MKELHKTSFWESLIIQKRVIGALLMREIITRYGRNNIGFLWLFVEPLLMTLIMVLMWKFF KVNNISTLNIVAFTITGYPMMMMWRNASNRAIGSISANMSLLYHRNVRVLDTIFARMLLE IAGATIAQIAIMSVLIAVRWIEMPADIFYMLLAWLLMAMFAIGLGLIICSVAFHFEPFGK VWGTISFVMMPLSGVFFFVHNLPQQLQHYVLMLPMVHGTEMFRAGYFGNSVTTYGNPWFI LLCNLVLLLLGLAMVTKFSKGVEPQ >gi|289656337|gb|ADEA01000030.1| GENE 14 15351 - 16001 772 216 aa, chain + ## HITS:1 COG:NMA0195 KEGG:ns NR:ns ## COG: NMA0195 COG1134 # Protein_GI_number: 15793220 # Func_class: G Carbohydrate transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: ABC-type polysaccharide/polyol phosphate transport system, ATPase component # Organism: Neisseria meningitidis Z2491 # 1 215 1 215 216 421 93.0 1e-118 MISVEHVSKRYLTRQGWRTVLHDINFTLQKGEKIGILGRNGAGKSTLIRLISGVEPPSEG EIKRTMSISWPLAFSGAFQGSLTGMDNLRFICRIYNVDIDYVKNFTEEFSELGQYLYEPV KRYSSGMKARLAFALSLAVEFDCYLIDEVIAVGDSRFAEKCRYELFEKRKERSIILVSHS HSAMKQYCDNAMVLENGHMHTFEDMDKAYEYYNALT >gi|289656337|gb|ADEA01000030.1| GENE 15 16067 - 16522 294 151 aa, chain - ## HITS:1 COG:NMB2016 KEGG:ns NR:ns ## COG: NMB2016 COG4968 # Protein_GI_number: 15677841 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein PilE # Organism: Neisseria meningitidis MC58 # 1 150 1 149 149 153 47.0 1e-37 MQENQIGFSLAELLFTIVITVILVTVAFVSYQSYIKSARLREAQTMLLSNARFMERFYHQ HSSFKKTSTTWPDLPDGGNGTFCIRPHGDARGALNDKFTLKAVAYDKDKEPRILKINESL ITVICESTTSICEEGKNYFSGSDKKCTVFQP >gi|289656337|gb|ADEA01000030.1| GENE 16 16650 - 18752 193 700 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 492 691 135 335 398 79 31 4e-14 MNYLERLSFGFSKKLPIVLQTEIAECGLACLTSIAGYHGYHSDLRTMRQKYSLSQKGLTL ADIVRFANDLNLTSRALRLDLDDLPNLRTPCILHWDLNHFVVLKEVRKDGIMIMDPAVGL RKIKQDEVSQKFTGIALELWPNTHFEEKEEKQKIKILSLLKGVTGIKRSLVQVLILAFAL EIFGLVSPFLMQWVIDHVIVTADRNLLLTLVLGFGLLKILEQLTSLLQAWVNMHLTTTLN VQWKANIFKRLLELPADYFTKRHLGDVISRFGSIDNIQETLTSTAFKTVLSGIMAVFTLI LMFYYSWLLSVAVLIALALYIIIRIVSYYPLRNATEENIVHDAKQNTYFMETVRGIHTVK LFEKNEQRHSSWMTLFVDTINTNLTKQKLTNIFDFANKLLFGIEGILIVYLGADKILDGG FTVGALTAFWAYKNQFETRVGELVDQYIKIRMLSLHAERLADIVLTETEAEKIEEIYIPE IEGDIDIVIDDVSFRYSDAEPYILQNINLHIKQGESLAFTGSSGCGKSTLMNILIGNLTP ESGKVLVNGHDIHKLSPRFIRGLSGTVTQDDVLFAGSISENICFFDETPNQQKIMQCAAM AMIHEDIMQMAMGYETLIGDMGNALSGGQKQRIILARALYREPKILFLDEATSHLDMENE RAINENLKFLNITKIMVAHRKETIESADRVIDMETLNRKG >gi|289656337|gb|ADEA01000030.1| GENE 17 18749 - 20044 1193 431 aa, chain - ## HITS:1 COG:PA4142 KEGG:ns NR:ns ## COG: PA4142 COG0845 # Protein_GI_number: 15599337 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Pseudomonas aeruginosa # 8 429 2 418 418 279 39.0 8e-75 MADNNSFFRPEIFEAKKNKWTGHVVLSRPFSFVFLTCCAAAGAFTLIIFAFFGSYTRKTT VEGQLLPVSGLVRVYAPDTGVVTSKKVADGDYVQQGDELLTISMPRYSGGGDVRAKLVKE AEMKKDMLLQEIERQKKVQQGEERTLTDTVAKLENQLADIRSQIQGQEKRVQLAKQIIEK YRPLLKQGFISEQQMIGYENEHLDQVSQLNALKREQAGVLRELNTQKQTLESLPAKQETE LSQLNRTVSEIKQEELNLDLQQEQTVHASKSGYVSTSNVEVGQQVSPSQLLLSIVPGNTE LVANLYVPSRAAGFINPNDKVVLRYQAYPYQKFGHAQGKIISIAKTALGKQELASLGGAS ADSENQMVQAQANEPVYLVKVKLEKQTIKVYGKNKPLQIGMVVEADILHERKKLYEWVLD PLYSITGKLKQ >gi|289656337|gb|ADEA01000030.1| GENE 18 20047 - 20235 135 62 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298370177|ref|ZP_06981493.1| ## NR: gi|298370177|ref|ZP_06981493.1| hypothetical protein HMPREF9016_01512 [Neisseria sp. oral taxon 014 str. F0314] # 1 62 1 62 62 87 100.0 2e-16 MVTELYVLFMYFGNRFLSKYKNNLFYGCFIFYIKYLFKKLELSAVSAVPFKVVPVSKKFP MG >gi|289656337|gb|ADEA01000030.1| GENE 19 20892 - 21083 282 63 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298370178|ref|ZP_06981494.1| ## NR: gi|298370178|ref|ZP_06981494.1| hypothetical protein HMPREF9016_01513 [Neisseria sp. oral taxon 014 str. F0314] # 1 63 1 63 63 118 100.0 1e-25 MKELNTSEQHYISGGGVVFFRDADDGSVVGEPDKRDLAAGRVRLSTPTGGSNITTLAFKH TRY >gi|289656337|gb|ADEA01000030.1| GENE 20 21180 - 21344 58 54 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKVIKLFEMEKVAGGLILSKPVYGISPSLPVKPIPLWEDRDGMYPLPPIRQEVM >gi|289656337|gb|ADEA01000030.1| GENE 21 21366 - 21473 103 35 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNELNMQELGRVGGGFRENRDSLDSLLNILNIVCF >gi|289656337|gb|ADEA01000030.1| GENE 22 21708 - 21881 306 57 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298370179|ref|ZP_06981495.1| ## NR: gi|298370179|ref|ZP_06981495.1| hypothetical protein HMPREF9016_01514 [Neisseria sp. oral taxon 014 str. F0314] # 1 57 2 58 58 88 100.0 1e-16 MKTLNQKELEQVAGGYRWSDFRKDWKDFWEEMGKGFSKAGDDISDAWKKARDAVHGN >gi|289656337|gb|ADEA01000030.1| GENE 23 22297 - 23619 1711 440 aa, chain + ## HITS:1 COG:NMA1994 KEGG:ns NR:ns ## COG: NMA1994 COG1538 # Protein_GI_number: 15794874 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Outer membrane protein # Organism: Neisseria meningitidis Z2491 # 9 425 45 459 467 307 44.0 2e-83 MPKLKKLPLFFSLFSILPTIANSFTLLDAWQAALGYSADFSAAKHERDAESEKKNQARAE LLPQVNANATYQKQPYSLSSNTQSRGWNVQATQVLFDRSLFAQYKQGKINAEMADARLYG SEDELRINVAKAYFDILLNKDKLAAITEEKSAYARQLQRAQEMFKQGAATILDTNEAKSG YDAALAKEISTLAQLQVAENTLANLTGLDPSQISPVKSDKNLADFLGESQEQEWQALAEQ HNPEWQLQRKTLENATQAVKAAKGSRLPTLTVNGGYQDDHSTYRQEYYGGSSDLTYRSKG GMFNVQLRVPLFTGGKISSQIREAVAREMQNKDLLTATERKVQLEVRQAYQTTRSSKIQT LAQQRLLESNQAKLEATLLGRQVGVRNNLEETQAQQEKADAEQKLAEAKYTYIQAYLKLL QSAGVLGDEERIRRVGMLLF >gi|289656337|gb|ADEA01000030.1| GENE 24 23825 - 24892 1360 355 aa, chain + ## HITS:1 COG:NMB0063 KEGG:ns NR:ns ## COG: NMB0063 COG1088 # Protein_GI_number: 15676000 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-D-glucose 4,6-dehydratase # Organism: Neisseria meningitidis MC58 # 1 355 1 355 355 705 93.0 0 MKKILVTGGAGFIGSAVVRHIIKNTQDSVVNLDKLTYAGNLESLTDVADNPRYAFEQVDI CDRAELDRVFAQHRPDAVMHLAAESHVDRSIDSAGEFIQTNIVGTFNLLEAARAYWQRMP SEKREAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRTYGL PTIVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQVV TEGVGGETYNIGGHNEKANIEVVKTICALLEELVPEKPAGVARYEDLITFVQDRPGHDVR YAIDAAKIGRELGWKPQETFESGIRKTVQWYLNNKTWWQNVLNGSYRLERLGTGK >gi|289656337|gb|ADEA01000030.1| GENE 25 25163 - 26062 1301 299 aa, chain + ## HITS:1 COG:NMB0062 KEGG:ns NR:ns ## COG: NMB0062 COG1209 # Protein_GI_number: 15675999 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-glucose pyrophosphorylase # Organism: Neisseria meningitidis MC58 # 1 287 1 287 288 531 88.0 1e-151 MKGIILAGGSGTRLYPITRGVSKQLLPVYDKPMIYYPLSVLMLAGIREILVITTPEDNAS FRRLLGDGDDFGISISYAEQPSPDGLAQAFIIGEEFIGGDNVCLVLGDNIFYGQSFTQML QKAVARNYGATVFAYQVKDPERFGVVEFNENFKALSLEEKPQQPKSDWAVTGLYFYDSRV VKFAKQIKPSERGELEITSLNQMYLEDGSLSVQLLGRGFAWLDTGTHESLLEAASFVQTV QNIQGLQVACLEEIAWRNGWLSDGRLEELARPMAKNEYGQYLLRLLKNKQRPSEKVGAA >gi|289656337|gb|ADEA01000030.1| GENE 26 26270 - 26809 651 179 aa, chain + ## HITS:1 COG:NMB0081 KEGG:ns NR:ns ## COG: NMB0081 COG1898 # Protein_GI_number: 15676014 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes # Organism: Neisseria meningitidis MC58 # 1 179 6 184 184 357 93.0 5e-99 MKLIDTAIPEVKLLEPQVFGDARGFFMETFRDEWFKANVCDRTFVQENHSKSGKGVLRGL HYQTENTQGKLVRVVVGEVFDVAVDMRKSSPTFGKWAGEILSAENKRQLWVPEGFAHGFY VLSDEAEFVYKCTDYYNPKAEHSLIWNDPSVGINWPLQGEPNLSPKDLAGKVLAEAVTF >gi|289656337|gb|ADEA01000030.1| GENE 27 26931 - 28076 603 381 aa, chain + ## HITS:1 COG:no KEGG:ESA_03357 NR:ns ## KEGG: ESA_03357 # Name: not_defined # Def: hypothetical protein # Organism: E.sakazakii # Pathway: not_defined # 1 369 1 363 370 320 47.0 8e-86 MNTNKVRKLFREPHIFFRDYLNKRFPPYNVEQPIPETEEFMLINADENLASLTENILPNF PIDVVFTWVDNTDKDWQQQYHQTLQPINQENIGLYATDPARFSNHNELFYSIKAVQKFMP WVRNIFIVTANQKPQWLNENTHPKIKLINHSQIIDDKYLPTFNSHVIEAHLYKIPNLSEH FIYFNDDVFVARDLSSSHFFESNGLASLFVANKSFQKMRHRGLITPTLTASEHALKLLKS YYSSINIDTPLVHTYVPLRKTTFQKAWSLFENEIHSFLNNKVRHNSELNMASFLVPWLMY LDGHATLKREVCYYFNIRSTHAQTQYKKLLFKKKYLHMPHSFCINDSSSNNTDKNYALHF RNFMDAYFETEANEISKPTDL >gi|289656337|gb|ADEA01000030.1| GENE 28 28094 - 30118 1741 674 aa, chain + ## HITS:1 COG:NMB0082 KEGG:ns NR:ns ## COG: NMB0082 COG3563 # Protein_GI_number: 15676015 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Capsule polysaccharide export protein # Organism: Neisseria meningitidis MC58 # 21 673 49 703 704 1125 82.0 0 MILSTIGLFKQRRLLALFLDDIPTTKTILFWGKKHPNRRKLAKISSLSLLNLEDGFLRSP GLGVAGCPPYSIVYDDIGIYYDTTRPSRLEQLILAADAMPSETLEQAQQAVDLILKHRLS KYNHAPELSDGHPLRAPSKSETVLIIDQTLGDMAIRYGGADAATFEHMFQTALNENPQAD IWVKTHPDVLCGKKQGYLTQLAQRHRVRILAEDINPISLLQNVDKVYCVTSQMGFEALLC GKQLTTFGLPWYAGWGVSDDRHPGINNLTQTRRRAPRTLLQLFATAYLQYSRYLNPNTGE AGSLFDVIDYLATVKRKNDKLRGELYCVGMSLWKRTVMKPFFNVPSCRLKFIPSTDKLAE MKLPDNARILAWGNGKDAIVRFAEQHNIPLLRMEDGFIRSVGLGSNLVPPLSLVTDDMGI YFNAETPSRLEHILQNQIFNEHDFQTASVLQKALTENRISKYNVGNANFTVPPTDKTVIL VPGQVEDDASIRHGSPQIRRNLDLLRTVRERHPDAYIIYKPHPDVVSGNRTGHISAEDTA RYADQTAPEADILTCLQYADEVHTMTSLTGFEALLRDKKVCCYGLPFYAGWGLTQDLLPI ERRSRRLELWQLIAGTLVYYPDYVHPEKHHFIDAATAVEILKNQKSLQKNNTNLYRNWFE KQIGKIRQLYRSLL >gi|289656337|gb|ADEA01000030.1| GENE 29 30331 - 31695 1366 454 aa, chain + ## HITS:1 COG:NMA0185 KEGG:ns NR:ns ## COG: NMA0185 COG3562 # Protein_GI_number: 15793213 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Capsule polysaccharide export protein # Organism: Neisseria meningitidis Z2491 # 5 407 6 407 419 572 66.0 1e-163 MNQPIKSNLHELIDTADNILLLQGPVGDFFRHFSEWLSNEHGKTVHKLNFNGGDDWFYPQ TIPHTSSYRGSYDDFSTYLAGYIVRHRIQAVVCFGDTRPYHILARTVAERENITFWAFEE GYLRPYFITLEKSGVNAYSPLPRDAGFFMEAYPRLPQQQYREPPAVPCGFMPVAKTAMRY YYQSNLKRKHYPNYIHHRPVQLGHYIKLWTMSACKRLNYWLEDRFMARHVKAGKYGRFFI VPLQVFNDSQVRVHCDFSSVRSFLLHVLTSFATHAPSDTHLIVKHHPMDRGFIDYEKDIR AFVKKHPSLKGRITYVHDVPLPVFLRSGAGMVTLNSTSGLSALIHNMPVKTLGRAHYDIP GLTDQAPLAEFWHNPTAPDKDIFHAYRMYHINVTQINGSFYSQVNFPKIPSKKPAILMRP SETVYVKCSAAALPAARETYSDKHDSFGKTKWHL Prediction of potential genes in microbial genomes Time: Thu May 26 13:46:17 2011 Seq name: gi|289656336|gb|ADEA01000031.1| Neisseria sp. oral taxon 014 str. F0314 cont1.31, whole genome shotgun sequence Length of sequence - 26853 bp Number of predicted genes - 13, with homology - 13 Number of transcription units - 9, operones - 3 average op.length - 2.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 75 - 1517 1837 ## COG0312 Predicted Zn-dependent proteases and their inactivated homologs - Prom 1641 - 1700 5.6 - Term 1840 - 1888 10.1 2 2 Op 1 . - CDS 1956 - 2888 1029 ## NMB2074 hypothetical protein 3 2 Op 2 3/0.000 - CDS 2885 - 4636 1493 ## COG0340 Biotin-(acetyl-CoA carboxylase) ligase 4 2 Op 3 . - CDS 4633 - 5139 642 ## COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase - Prom 5164 - 5223 5.2 - TRNA 5381 - 5456 84.6 # His GTG 0 0 - TRNA 5468 - 5544 84.3 # Arg TCT 0 0 - TRNA 5577 - 5654 85.4 # Pro TGG 0 0 + Prom 5823 - 5882 7.1 5 3 Tu 1 . + CDS 5924 - 6775 837 ## COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase + Term 6807 - 6852 14.6 - Term 6781 - 6849 16.5 6 4 Tu 1 . - CDS 6855 - 10133 2449 ## COG3419 Tfp pilus assembly protein, tip-associated adhesin PilY1 - Prom 10154 - 10213 7.1 - Term 10426 - 10467 10.7 7 5 Tu 1 . - CDS 10508 - 13723 2335 ## COG3419 Tfp pilus assembly protein, tip-associated adhesin PilY1 - Prom 13964 - 14023 6.0 + Prom 14236 - 14295 6.3 8 6 Tu 1 . + CDS 14528 - 15658 1845 ## COG0505 Carbamoylphosphate synthase small subunit + Term 15890 - 15934 1.1 + Prom 16170 - 16229 3.9 9 7 Op 1 . + CDS 16385 - 16642 524 ## LAR_0168 hypothetical protein + Prom 16654 - 16713 3.4 10 7 Op 2 . + CDS 16736 - 17125 395 ## COG2852 Uncharacterized protein conserved in bacteria 11 8 Op 1 . + CDS 17971 - 18969 746 ## gi|298370198|ref|ZP_06981514.1| conserved hypothetical protein 12 8 Op 2 . + CDS 18984 - 22199 4702 ## COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) 13 9 Tu 1 . + CDS 22376 - 26852 5096 ## COG4889 Predicted helicase Predicted protein(s) >gi|289656336|gb|ADEA01000031.1| GENE 1 75 - 1517 1837 480 aa, chain - ## HITS:1 COG:NMA0367 KEGG:ns NR:ns ## COG: NMA0367 COG0312 # Protein_GI_number: 15793375 # Func_class: R General function prediction only # Function: Predicted Zn-dependent proteases and their inactivated homologs # Organism: Neisseria meningitidis Z2491 # 1 480 1 480 480 822 88.0 0 MQQTYPTVRHDLLEANHLSPELLARSLSIIGGRKVDYADIYCQHTAFESWHLEEGIVKSG SFQIEQGVGVRAVSGEKTAFAYADSLCIDSINRSAHAVRVIGAGGGEQHIRVPAVKHGKQ VHSGFDPIASLDSAAKVALLNKVETLAKAADPRIVQVMAGLTCEYDMIYIARLDGRHAAD VRPMVRLNVTVIAKQGDRREQGSAGGGGRYDLAYFDETLVRQFVDSAVKQALINLESRPA PAGEMTVVLGNGWPGVLLHEAVGHGLEGDFNRKETSVFSGRIGERVAAKGVTVVDQGDIA DRRGSLNIDDEGNETRRTVLIEDGILVGYMQDETNARLMGTQSTGNGRRESYASAPMPRM TNTFMENGGYEPDEIIASIDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEGGKLQYPVK GATIIGNGPEVLKHVSMIGNDTALDSGIGVCGKDGQSVPVGVGQPTLRIDVGLTVGGSEI >gi|289656336|gb|ADEA01000031.1| GENE 2 1956 - 2888 1029 310 aa, chain - ## HITS:1 COG:no KEGG:NMB2074 NR:ns ## KEGG: NMB2074 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis # Pathway: not_defined # 1 310 1 288 288 163 38.0 8e-39 MKWLFALLVALNLIVFGGMVAYRMTVKQNQTVVQASAPLEGGTHELARPESLTPKSTTPA SAPDSVPEWVAQSESNAAVAERKTEKTEESQAVERRVENEQDKKVREEQEAKAKEKEKEK KEREEKLKREKERKEKAAENQNTASEEGKPAQQQCSTATVVIDEDDYHRIKGLLGRWPHA ATRSVEKRTPKKSAQKPSKNYRVLISTGGDAVAQLENLNAKGFSGTLHNGEISVGVTHSR SAAQIIISRLSSANIGGARIVEDEEGGGTSDGALSVARMHITFMSVDGRMAQDINNVVGR YGKLNVKNCK >gi|289656336|gb|ADEA01000031.1| GENE 3 2885 - 4636 1493 583 aa, chain - ## HITS:1 COG:NMA0357_1 KEGG:ns NR:ns ## COG: NMA0357_1 COG0340 # Protein_GI_number: 15793366 # Func_class: H Coenzyme transport and metabolism # Function: Biotin-(acetyl-CoA carboxylase) ligase # Organism: Neisseria meningitidis Z2491 # 1 330 1 331 338 476 70.0 1e-134 MTVFKQRHWQLLAALSDGLPQHVSQLGRLAGIKPQQLNGFWQQMPPHIRGLLRQHDGQWR LVRPLAVFDETGLDAVGRKHGFQTALEQECTSSNDVVLERARRSADGAHKFLCVAHFQSK GRGRQGKSWHNRLGECLMFSFGWSFDRQQNELGALALAAALACNRALAKLGLATQIKWPN DLVVGRDKLGGILIETVRTDGKTVAVVGIGINFVLPKEVENAASVQALFQTASQKGVSAA QLLDSLLDELNIALMQFGEYGFEPMLADYQAANRDQGRPVILLQEERVIHEGTVAGVTGQ GALRLNTREGEKTIVSGEISLRPNDNPVPVQPVCNDRYLLLDGGNSQLKWAWVENGAFHE VGRAPYRDLSRLGEEWAARGGEDVKIVGCAVCGDAKKALAEAQLMRPVEWLASMAQGLGI RNHYRNTAEHGSDRWFNALGSRRFSRNACVIVSCGTAVTTDALTDDDHYLGGTIMPGFHL MKEAMALKTANLNRPIGKVYPFPTTTSNALASGMMDAVCGALMVMHGRLKNKIGSDKPVD VVITGGGAAKVVQALPEAFVLDNTVKIVDNLVIYGLLNWIEQK >gi|289656336|gb|ADEA01000031.1| GENE 4 4633 - 5139 642 168 aa, chain - ## HITS:1 COG:NMA0356 KEGG:ns NR:ns ## COG: NMA0356 COG2870 # Protein_GI_number: 15793365 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase # Organism: Neisseria meningitidis Z2491 # 4 167 5 168 168 254 84.0 5e-68 MSEWPLPAFEQKICPPEELAERLAALPRPLVFTNGCFDILHRGHVTYLAQAKATGAFLIL ALNTDASVRRLGKGDDRPVNPLENRAAVAAALESVDLVTWFDEDTPAELIELVKPDILVK GGDWAADKIVGAKETLARGGKVYSIPFLHQTSTTKTLAKIRAGEAAEK >gi|289656336|gb|ADEA01000031.1| GENE 5 5924 - 6775 837 283 aa, chain + ## HITS:1 COG:NMA0354 KEGG:ns NR:ns ## COG: NMA0354 COG0190 # Protein_GI_number: 15793364 # Func_class: H Coenzyme transport and metabolism # Function: 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase # Organism: Neisseria meningitidis Z2491 # 1 283 1 283 284 440 80.0 1e-123 MTAQLINGKEVSQQRLASVAQAVQERTAAGLRVPCLAVILVGDDPASAVYVRNKKKACLQ AQIESLSYELPASTTQEELLQLVQQLNDNPKVDGILVQLPLPAHIDSQDILEHILPHKDV DGFHPYNVGRLAVKKPLLRPCTPKGVMTLLESYHIDPKGKKAVIVGASNIVGRPQALEML LARATTTVCHSATENLAAEVGAADILVVGVGIPNFVKGSWIKPGAVVIDVGINRLEDGSL CGDVEFDIAKERASMITPVPGGVGPMTIATLLENTLEAAKLHD >gi|289656336|gb|ADEA01000031.1| GENE 6 6855 - 10133 2449 1092 aa, chain - ## HITS:1 COG:NMA0609 KEGG:ns NR:ns ## COG: NMA0609 COG3419 # Protein_GI_number: 15793599 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, tip-associated adhesin PilY1 # Organism: Neisseria meningitidis Z2491 # 402 1092 396 1036 1037 323 35.0 1e-87 MKNIKIPSGFRSPLRPMIYSVASALLFISLEAHAQFSPTPPYLQNESSTKGQLTVKHNIM LLIDDSGSMEYVPSSDRRPYSSYYYGYGAREISRLDITKNVLNKVLDKYQDRFNWSLQTL HNNGRTDTQDFSSSWRTIKNKVNGIRAENGTPTTRRYYEVVSNIVMPNIKYRCQKSYVVL MSDGDANLSCDIYDYWGRPGYGISPFYYGRRYYSDYYRDYIPSVGMSSYNYFGPHSGGYC RNQTGGAYDTFWDREDGLAFFSRTLATKDIKVGGKDKAGKSWDGDYSDPRGTNFKNQLVQ TYTVGFGSGVSATGEAYLRNGASGSNNYFNARDENGLFAAFDAITDSIANDSKNEIIEAE GTVSPAVTSSGISGMAANVQLDSGSWSSQLQFFRIDKQTGEVNTSGADIRYPLFTERKTL INTDGKNVYWANETGKYGSDAYFGLTKKKDEWKNALMPWVTRSGQDNTIKNTYSEATGYS QNYRLRETSPSDKRNLGDIIDSSVLTVGGGQTTDGLVDGRNEFLVTAANDGMVHLFQSKN DTHPYSLKLSYIPGGMERDASYGGKNIAETLKEVAHEKYGRDASHPHRYLINGGIVVRRT AEDAEAGIIGQQSFLFGTMGQGARGAYALNIGGKDRTTGKAVGLNAPENTWDKQIPLFET EKGENNQLGYIVGSPQIGRIALEREAGGAVKSAEREITVNNKKEKKVRYKNTRYAGFLSN GFALTKGGIKNESALYIYDMLGQDADSGAYGGSKAGTLIQKIVADNSSAQGLSAPTLVDA DFDGIVDVAYAGDYKGNMYRFDLRSTDKSKWSVKKIFSGSAAQPITSAPAISRYGLNKYV VIFGTGSDIYQEDVDDKNRQAIYGIYDDLNLQGDKVVAAESKDLLEQELSEMTVDGKTVR QITTNNQVGSNHKGWMVKLGTDDGERVIVKPTMILRTAIVSTRIYNQKKEKISSSGDPCS IDSYKTETMSSSWILTLNALTGGKLDKYDAHLTILRAEGEATDTYYAGLQKEGITSFTYM DSAKLNDSPVTADGDSGGAGTDQAYKTANNEIPNNTCFGKDTLRVLLTNKNESFNVRGRI CGVRRLSWGEIF >gi|289656336|gb|ADEA01000031.1| GENE 7 10508 - 13723 2335 1071 aa, chain - ## HITS:1 COG:NMA0609 KEGG:ns NR:ns ## COG: NMA0609 COG3419 # Protein_GI_number: 15793599 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, tip-associated adhesin PilY1 # Organism: Neisseria meningitidis Z2491 # 338 1065 332 1036 1037 324 34.0 7e-88 MKFTTKQPRLSVPLRPMICSIASALSLFSLEAHAQFASTPLYLQNDSSSAGQLGVKHNIM LFIDDSGSMKWIPGEKRPPRYYGEKSRLAITKSVLNKVLDKYQDQFNWSLQTLHNNGRTD TADFKTPWKSVKDRVDGIEAANGTPTTRRYYEIVSGIVMPSVEYRCQKAFVVLMSDGDAN LSQACGRYSSSRNRSFVYPAGYAYDDYFGRQHAGACRDIDGGSYDTFWDRNTGLSFFSRK LSSIDFKTSGLDKAGKSWQGDPKDPKTAKNPNGFRDQLVQTFTIGFGRDISSAGRNYLTN GASRDDYYFSAESEDDLYRAFDTITDSIKDESQNVVIETTGTTAPAVTNSGISGMAANVQ LDTGSWSSRLQFYSINPSTGAVVDKTQFKSPLFSERKVLIHDGKNVHWANETNKYGSDAY FGLTKKANEWKGALIPWLARSAADSTIAGWYKEASGYSQNYRIRETSPSDKRNMGDIVDS PVLTIGGASSDGLLNGRNEFMVTAANDGMVYLFQSRDETNPYSLKLNYIPAGMERGANYG GKNVAETLKDVAHEKYGSDTAHPHRYLVNGGIVVRRTAEDAEAGIKDRQSFLFGAMGQGG RGAYALNIGGKNRATGDSVGLNAASTAWNTKVPLFETAKGENNTLNYTVGTPQIGRIALE RNSDGTVKSGSRKIKTGNKTEEKVRYRNTRYAGFLANGYLMTKGGQTESALYIYDMLGQD ADSGISEGTAAGTLVKKIIAGSTTQGLSAPTLVDADFDGIVDVAYAGDYAGNMYRFDLRG EDATKWSVKKIFSGSAGQPVTSAPAVSRYAANKYVVIFGTGSDVYQDDVGDKTQQAVYGI YDDLSLTGKEVTAATSGDLVEQTLSETIDASGKTLREITSDNQIGDKKGWMVKLGEKDGE RVVVKPTMILRTAVISTRIYDQKVETSGGSGDPCSIDSHKTATSSSSWILALNAKTGGKL SKNDAYVNFLKAGKPALYYAGLKQEGITSFTYMDGSKTDDSPVTRDGDSGGSGTDQKYKA PNSEIPNNSCFSKKTVRVLLTNKNQSFGIGGRICGLRRLSWREVFDATKDK >gi|289656336|gb|ADEA01000031.1| GENE 8 14528 - 15658 1845 376 aa, chain + ## HITS:1 COG:NMA0608 KEGG:ns NR:ns ## COG: NMA0608 COG0505 # Protein_GI_number: 15793598 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase small subunit # Organism: Neisseria meningitidis Z2491 # 1 376 1 376 377 744 96.0 0 MTIPALLVLADGSVFHGTSIGYEDSTSGEVVFNTSMTGYQEILTDPSYCKQIVTLTYPHI GNTGTNAEDEESRSVYAAGLIIRDLPLLHSNFRASESLHDYLVRNKTVAIADIDTRRLTT LLREKGAQGGAILTGADATVEKARELIAAFGSMVGKDLAKEVSCTEVYEWTEGEWALGKG FVTPAEQPFHVVAYDFGVKTNILRMLAARGCRLTVVPAQTSAEDVLALNPDGVFLSNGPG DPEPCTYAIEAVQKLMASGKPIFGICLGHQLISLAIGAKTLKMHFSHHGANHPVQDLDSG KVVITSQNHGFAVDADTLPANARITHKSLFDNTLQGIELTDKPVFCFQGHPEASPGPQDV GYLFDKFIDNMKAAKQ >gi|289656336|gb|ADEA01000031.1| GENE 9 16385 - 16642 524 85 aa, chain + ## HITS:1 COG:no KEGG:LAR_0168 NR:ns ## KEGG: LAR_0168 # Name: not_defined # Def: hypothetical protein # Organism: L.reuteri_K # Pathway: not_defined # 4 83 24 103 106 110 67.0 1e-23 MTEKQMRVLSVVATLTAVGMYVSYIPQIQNNLAGNPGSPLQPLVAAINCTLWVAYGFLKE KRDYPVMLANAPGIILGLITFITSF >gi|289656336|gb|ADEA01000031.1| GENE 10 16736 - 17125 395 129 aa, chain + ## HITS:1 COG:NMA0605 KEGG:ns NR:ns ## COG: NMA0605 COG2852 # Protein_GI_number: 15793595 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 129 1 129 129 235 94.0 2e-62 MNPPEKLLTADNPALHQRAKAMRQEMSEAEAKLWQHLRAGRLNGYKFRRQQPMGNYIVDF MCVTPKLIVEADGGQHTEQAAYDHARTAYLNSLGFTVLRFWNHEILQQTNDVLTEILRVL QELEKQPAR >gi|289656336|gb|ADEA01000031.1| GENE 11 17971 - 18969 746 332 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298370198|ref|ZP_06981514.1| ## NR: gi|298370198|ref|ZP_06981514.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 332 1 332 332 575 100.0 1e-162 MIRLDSDYKWWEKTVEYLFVIQYLSMIYPDNFLKIAPLDGDHEQAGDVILCNPNNKYYLI EFKKRSSSQYDEFIKFLDVKSKNFKFLKEKCSESEIAKYLSEALSNENFDFSKLAKIKID PQYKIKNLQELKDAKYHFVIFAKRERDELFLYAQQYKDYLKKLENSIPQTNFKKEFDENA ASRDEFLAYVHEFVSLKKGKELVIVDDGKSSSAFANVLAINSEGQTCTLLDIINSKTYQN KYPPLNVETIQKNLDGIANEINQPDITLQRVEELNEILGEFREYLNDAQEDFENTQNIIT EIEQSIDSLERNLDKLKIELTPKETNSVKFKI >gi|289656336|gb|ADEA01000031.1| GENE 12 18984 - 22199 4702 1071 aa, chain + ## HITS:1 COG:NMA0602 KEGG:ns NR:ns ## COG: NMA0602 COG0458 # Protein_GI_number: 15793592 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase large subunit (split gene in MJ) # Organism: Neisseria meningitidis Z2491 # 1 1070 1 1070 1071 2097 96.0 0 MPKRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEM ADVTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATE DAIDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVGFPTLIRPSFTMGGSGGG IAYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKNDNCIIICSIENFDPM GVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEM NPRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGRTPASFEPSIDYVVTKIP RFAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRSEDKAEIR RELANPGPERMLFVADAFRAGFTLEEIHEICAIDPWFLAQIEDLVKEEQQVSAGCLQDLD FAALRRLKRKGFSDKRIAQLLGIKEKEVREHRYALNLHPVYKRVDTCAAEFATETAYLYS TYEEECEARPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCNPETV STDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLANALVENGVNIIGTSA DSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIGYPLVVRPSYVLGGRAMQ VVHSAEELQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSDGKDVVIGGIMQHVEQAG IHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNVQFAVQDGVVFVLEVNPRA SRTVPFVSKATGVPLAKVGARCMAGISLQEQGVEKEVVPDFYAVKEAVFPFIKFPGVDTI LGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFLAVRDEDKPLIVKTAQNFQA LGYGVCATRGTAEYLKEHGIIVQAVNKVQEGRPHIVDAIKNGEIALVVNTVSSSAQSISD SHSIRRTSLTQRVPQYTTIAGGEAMSEGAKSRDHLGVYSVQELHGRLKARK >gi|289656336|gb|ADEA01000031.1| GENE 13 22376 - 26852 5096 1492 aa, chain + ## HITS:1 COG:MT2082 KEGG:ns NR:ns ## COG: MT2082 COG4889 # Protein_GI_number: 15841510 # Func_class: R General function prediction only # Function: Predicted helicase # Organism: Mycobacterium tuberculosis CDC1551 # 1 1478 1 1400 1606 1283 47.0 0 MSALQTLLASFREQTQNAAYQGRRDQGTAFEHLMVAYFQTEPCYKELYQNVQPYGTWAAK HLNELDLGGATDAGIDLVATTFTGEHHAIQCKNYAPDHTLQKKDIDSFFTASGKTHFSNR IIVSTTDKWSKNAEDALEGQHIPVSKITLSDLENSVIDWTQYHIGEPPKRKNRKSLRPHQ QSALTAVSNGFARGETRGKLIMACGTGKTFTSLRIAEHLAGKGKRVLFLVPSLSLLSQTL REWTQDADLPLRNFAVCSDSEVGKYKKDDDRTFVRPSDLNYPATTNAKSLYQAASVLHDA EHMTVVYSTYHSIDVIHQAQAQYGLPEFDLIICDEAHRTTGATFDGDDESAFVRVHDAGY IKGAKRLYMTATPRIYVDDAKAADGVSVYSMDDETHYGKEFFVLTFSQAVSQKLLVDYKV IVLAIDQAHVERRLQELLRDDTGSELKIDDAAKIVGCWKALSKYGLSGEEGALYNPMRRA VAFCQVIEKEYKGSRHKVSSKLIADEFSKVVKKYQQKETEEWLKDNPDLLTPPSLAMICE AKHVDGGMNAGEKESRLQWLKADIPDNTCRILSNVRCLSEGVDVPALDAVLFLTPRNSKV DVVQSVGRVMRRAEGKKQGYVILPVVIPPGIEPEAALDKNENYKVVWDVLNALRSHDDRF DAMINKLEFNGKDTDKLEIVAITGQNFRQMEVVSKVGKITPKAKRNKQDQVLREARNSYN IGQSEKPHPIQETLPFETGAIERALYAKIVKKCGNRHHWEDWAGDIAKIARTHIDSINAI LENPANEAECTAFEAFAAELRDDLNNAVSDEEIVEMLAQHLITKPVFDALFSDYSFAEHN PMSRAMQKVLDLLQQKNLHKERNTLQSFYDSVHLRASGIETAEGKQKIVVELYDKFFRNA FPRMTERLGIVYTPVEVVDFIIKSVEDVLQHEFKSSLQDKGVHILDPFTGTGTFITRLLQ SGIIPRDRLPEKYKNEIHANEIVLLAYYIATINIESAYHGILAGNIDGNVSDDVPYVPFE GICLTDTFQMYEKGDMLDEMLVDNSARRKRQKALDIRVIIGNPPYSAGQESANDNNANIE YPHLDARIRQTYAEHSTATLKNALYDSYIRAIRWASDRIGQQGVIGFVTNAGWVEANTAD GLRKCLAEEFSSLYIFHLRGNQRTSGERSRKEGGKIFGSGSRAPIAISILVKNPQAEKRG QIYFHDIGDYLTREQKLETIAELGSIGGITEQQGWQEIVPDEFNDWLNQRDPNFDSYISL GNKKSKDEIAVFENYSRGIATSRDVWCYNFSGSLLRQNMQNMIGFYNSEVARFQAACKGL PENQRPDVNNFLNYDDTKMSWDFAQKNDLPKGKTYTFTDNSIQAALYRPFTKEWIYCNRE VNNRVYQMPKIFPNQHTVNQVISVTGRGSTKEFSALISSEIPDLEMISKGQCFPSDVYEF SDGVETAERTNERTNERTNERTNERTNERTNERTNERTNERTNERTNERTNE Prediction of potential genes in microbial genomes Time: Thu May 26 13:46:52 2011 Seq name: gi|289656335|gb|ADEA01000032.1| Neisseria sp. oral taxon 014 str. F0314 cont1.32, whole genome shotgun sequence Length of sequence - 44104 bp Number of predicted genes - 45, with homology - 44 Number of transcription units - 31, operones - 11 average op.length - 2.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 1208 1049 ## COG4889 Predicted helicase + Term 1222 - 1271 5.2 - Term 1205 - 1264 12.1 2 2 Tu 1 . - CDS 1276 - 1920 700 ## COG4452 Inner membrane protein involved in colicin E2 resistance - Prom 2002 - 2061 4.2 + Prom 2013 - 2072 2.6 3 3 Op 1 2/0.364 + CDS 2134 - 2814 1002 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 4 3 Op 2 . + CDS 2871 - 3620 1128 ## COG0500 SAM-dependent methyltransferases + Term 3687 - 3733 7.5 - Term 3668 - 3726 13.2 5 4 Op 1 . - CDS 3744 - 4778 1299 ## COG1073 Hydrolases of the alpha/beta superfamily 6 4 Op 2 . - CDS 4727 - 4894 98 ## - Prom 4923 - 4982 7.0 + Prom 5050 - 5109 7.2 7 5 Tu 1 . + CDS 5158 - 6477 348 ## COG1106 Predicted ATPases + Prom 6566 - 6625 5.2 8 6 Op 1 . + CDS 6774 - 7118 110 ## CJA_1583 CRISPR-associated protein, Csm2 family 9 6 Op 2 2/0.364 + CDS 7137 - 8042 1231 ## COG0583 Transcriptional regulator 10 7 Tu 1 . + CDS 8231 - 9256 991 ## COG0642 Signal transduction histidine kinase + Prom 9390 - 9449 5.4 11 8 Op 1 3/0.091 + CDS 9521 - 10501 1051 ## COG3087 Cell division protein 12 8 Op 2 2/0.364 + CDS 10511 - 11203 1013 ## COG0526 Thiol-disulfide isomerase and thioredoxins + Term 11222 - 11252 3.0 13 9 Tu 1 . + CDS 11335 - 12159 1176 ## COG1968 Uncharacterized bacitracin resistance protein + Term 12401 - 12445 2.0 - Term 12167 - 12233 28.5 14 10 Op 1 . - CDS 12250 - 12600 432 ## gi|298370213|ref|ZP_06981529.1| hypothetical protein HMPREF9016_01548 15 10 Op 2 1/0.455 - CDS 12616 - 12810 265 ## COG4391 Uncharacterized protein conserved in bacteria - Prom 12840 - 12899 5.8 - Term 12898 - 12936 4.2 16 11 Tu 1 . - CDS 12997 - 13926 1635 ## COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase - Prom 14068 - 14127 3.9 - Term 14139 - 14177 10.2 17 12 Op 1 13/0.000 - CDS 14194 - 15450 1392 ## COG0860 N-acetylmuramoyl-L-alanine amidase 18 12 Op 2 . - CDS 15438 - 15908 607 ## COG0802 Predicted ATPase or kinase - Prom 15934 - 15993 4.6 + Prom 15936 - 15995 4.7 19 13 Tu 1 . + CDS 16158 - 16967 1254 ## COG0796 Glutamate racemase + Term 16983 - 17027 8.1 - Term 17057 - 17109 13.1 20 14 Op 1 29/0.000 - CDS 17120 - 19051 3031 ## COG0443 Molecular chaperone - Prom 19163 - 19222 5.8 21 14 Op 2 . - CDS 19349 - 19891 988 ## COG0576 Molecular chaperone GrpE (heat shock protein) - Prom 19977 - 20036 3.8 + Prom 19979 - 20038 5.3 22 15 Tu 1 . + CDS 20066 - 20884 1333 ## COG1045 Serine acetyltransferase + Term 20909 - 20970 8.0 - Term 20897 - 20958 14.3 23 16 Tu 1 . - CDS 20973 - 21851 799 ## COG1560 Lauroyl/myristoyl acyltransferase + Prom 22135 - 22194 8.6 24 17 Op 1 . + CDS 22266 - 23435 1768 ## COG0192 S-adenosylmethionine synthetase + Term 23459 - 23496 9.1 + Prom 23518 - 23577 3.7 25 17 Op 2 . + CDS 23607 - 23900 581 ## COG2960 Uncharacterized protein conserved in bacteria + Term 23927 - 23970 10.3 - Term 23911 - 23962 10.8 26 18 Tu 1 . - CDS 23984 - 25483 863 ## COG0606 Predicted ATPase with chaperone activity - Prom 25719 - 25778 7.0 - Term 26007 - 26046 6.1 27 19 Op 1 . - CDS 26116 - 26475 294 ## COG2018 Uncharacterized distant relative of homeotic protein bithoraxoid 28 19 Op 2 . - CDS 26525 - 27166 102 ## NMC1670 hypothetical protein 29 19 Op 3 . - CDS 27173 - 27709 549 ## COG2229 Predicted GTPase 30 19 Op 4 . - CDS 27722 - 28825 406 ## NMB0476 hypothetical protein 31 19 Op 5 . - CDS 28848 - 30272 413 ## NMO_1567 hypothetical protein - Prom 30389 - 30448 6.3 + Prom 31491 - 31550 5.4 32 20 Tu 1 . + CDS 31590 - 32594 334 ## COG1376 Uncharacterized protein conserved in bacteria + Term 32620 - 32657 9.1 + Prom 32650 - 32709 7.0 33 21 Tu 1 . + CDS 32774 - 33820 392 ## COG0002 Acetylglutamate semialdehyde dehydrogenase + Term 33868 - 33904 -1.0 - Term 33792 - 33832 3.3 34 22 Tu 1 . - CDS 33982 - 34257 275 ## NGK_1687 hypothetical protein - Prom 34400 - 34459 9.9 + Prom 34357 - 34416 9.5 35 23 Op 1 . + CDS 34463 - 35158 719 ## COG2932 Predicted transcriptional regulator + Term 35310 - 35343 -0.4 + Prom 35205 - 35264 6.9 36 23 Op 2 . + CDS 35353 - 35691 400 ## COG0316 Uncharacterized conserved protein + Term 35702 - 35764 26.0 + Prom 35730 - 35789 6.2 37 24 Tu 1 . + CDS 36029 - 36697 539 ## NMCC_0504 hypothetical protein + Term 36718 - 36766 10.1 + Prom 36762 - 36821 4.1 38 25 Tu 1 . + CDS 36843 - 38363 1926 ## COG0661 Predicted unusual protein kinase + Term 38366 - 38421 6.1 - Term 38236 - 38271 -1.0 39 26 Tu 1 . - CDS 38452 - 39228 1042 ## COG0708 Exonuclease III - Prom 39254 - 39313 4.2 + Prom 39294 - 39353 1.8 40 27 Tu 1 . + CDS 39385 - 40377 462 ## PROTEIN SUPPORTED gi|163786851|ref|ZP_02181299.1| 50S ribosomal protein L32 + Term 40419 - 40466 12.2 + Prom 40418 - 40477 4.4 41 28 Tu 1 . + CDS 40498 - 41484 1417 ## COG0616 Periplasmic serine proteases (ClpP class) + Term 41505 - 41543 10.2 - Term 41493 - 41531 10.2 42 29 Tu 1 . - CDS 41599 - 41844 428 ## gi|298370240|ref|ZP_06981556.1| hypothetical protein HMPREF9016_01576 - Prom 41901 - 41960 3.8 - Term 41988 - 42028 11.5 43 30 Op 1 . - CDS 42043 - 43359 1415 ## COG0548 Acetylglutamate kinase 44 30 Op 2 . - CDS 43356 - 43760 414 ## NMCC_0346 hypothetical protein - Term 43863 - 43899 -0.1 45 31 Tu 1 . - CDS 43917 - 44093 271 ## COG0461 Orotate phosphoribosyltransferase Predicted protein(s) >gi|289656335|gb|ADEA01000032.1| GENE 1 3 - 1208 1049 401 aa, chain + ## HITS:1 COG:pli0021 KEGG:ns NR:ns ## COG: pli0021 COG4889 # Protein_GI_number: 18450304 # Func_class: R General function prediction only # Function: Predicted helicase # Organism: Listeria innocua # 203 400 1392 1567 1569 158 42.0 2e-38 ERTNERTNERTNERTNERTNERTNERTNERTNERTNERTNERTNERTNERTNERTNERTK LYTTKYRPISPSASPRPAARASLCLSPTKSPIYTLSATHSASRCSSTRRSNQHDDLYYRL GHDQRLFRTDDQCDTRCPVADERAMLPHVPLRNGGSLMENQDLFAAEMPSEKQPAQKKLV RRSAITDDALAHFREPYSATDAARIGKEDIFYYIYGLLHSEEYRERYADNLSKQLPRIPR MKNYADFSAFSRAGRDLAALHLNYETVPMYQGVKFSGSLQGLKLAPQQIIGGADEDFRVV KMKFAKKDDKTKIVYNGKITVENIPEAAYDYIVNGKSAIEWVMERQAVTTDKKSGITNDA NDWAADTMHNPRYPLELLLRVITVSLETQKIVYALPKLDIV >gi|289656335|gb|ADEA01000032.1| GENE 2 1276 - 1920 700 214 aa, chain - ## HITS:1 COG:ECs5358 KEGG:ns NR:ns ## COG: ECs5358 COG4452 # Protein_GI_number: 15834612 # Func_class: V Defense mechanisms # Function: Inner membrane protein involved in colicin E2 resistance # Organism: Escherichia coli O157:H7 # 31 193 273 435 450 108 40.0 6e-24 MEQKMTKKLWSVIGLCIAFAVVLLWIYGLAEQRSEYQSSILLGAEGYHMVVRSVKYGMVL VVLVFSSFFLSEILQEWRIHPVQYLLVGAALSIFYLLLLSLAEHVGFTAAYTIGAAACIG LLFWYLRFVLATTRGVHMMTALLVAAYGTMFVLIKMQQYNLLAGSCLLFAALFAVMYYTR EIDWYALNKSQEKTVGKPLAASMVSHGNGTGRTD >gi|289656335|gb|ADEA01000032.1| GENE 3 2134 - 2814 1002 226 aa, chain + ## HITS:1 COG:PA0463 KEGG:ns NR:ns ## COG: PA0463 COG0745 # Protein_GI_number: 15595660 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Pseudomonas aeruginosa # 3 224 2 225 229 184 49.0 9e-47 MNPHILIIEDEREIAELVELSLARAHFTARIAPTAEQARQLLAREHFDLLLLDVGLPDTE GFELLKTLRPQHPQPVIMLTAQDEETDRILGLELGADDYIGKPFSPRELVARVKAVLRRT QTRPASEAESAPVWHDDAPACCIRHQGRELPLTQGEYRLLRTLLHRPGRVFSREELLTAM FGGNRPSDPHTINTHIRALRHKLRAAGVAGEPIRTHHGLGYSFNET >gi|289656335|gb|ADEA01000032.1| GENE 4 2871 - 3620 1128 249 aa, chain + ## HITS:1 COG:AF0140 KEGG:ns NR:ns ## COG: AF0140 COG0500 # Protein_GI_number: 11497757 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Archaeoglobus fulgidus # 25 209 6 172 261 64 27.0 2e-10 MPSAKLIQKLKPALQNPLPPEQDGILLCLNSDSVTGDNAKYMNMYNRLARWYDFGERWIA RLKYGNSINETRRSLVNELEWRQDCTALYVSIGTGTDLNHLPANIDLSALDLTGADLSLG MLARCRNVWRKKAAGLDLVHCNAEDLPFADNMFDVVFHVGGINFFSDKQKAINEMLRVAK PGTKIMIADETTDFIQKQYKKSLFTRNYFQDTDFDLTQIENCIPETVQEKKTRLLWSNRF YCITFRKPV >gi|289656335|gb|ADEA01000032.1| GENE 5 3744 - 4778 1299 344 aa, chain - ## HITS:1 COG:ECs0310 KEGG:ns NR:ns ## COG: ECs0310 COG1073 # Protein_GI_number: 15829564 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Escherichia coli O157:H7 # 1 332 39 369 378 386 58.0 1e-107 MQLTQEWDKIFPQSNKVEHHKVTFRNRYGITLVGDLYVPKNIRSGQKLPAIAVVGAFGAV KEQSSGLYAQEMAERGFVTLAFDPSYLGESGGEPRNMASPDINTEDFSAAVDFLGLQNFV NREQIGILGICGWGGMALNAAVGDTCIKAVATSTMYDMTRVMANGYEINMKQNAQGGYDR TQPQTAEARYQMKVQLNNGRWEAAQNGYATLSPANNLDPKDITADTPKFIAEYADFYRTK RGFHPRAVNSNPQGSWATTVPLAFINMPILQRAGELRAPALIVHGEKAHSRYFSEDAFKS LGSKNKELYIVPGANHTDLYDNTRGKIPFDKLSSSLKQICIKVV >gi|289656335|gb|ADEA01000032.1| GENE 6 4727 - 4894 98 55 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKNRAKKSFLKTAAAAAVALTLSGPALADVSITPMKGKLCSLPKNGTKFSLSPIK >gi|289656335|gb|ADEA01000032.1| GENE 7 5158 - 6477 348 439 aa, chain + ## HITS:1 COG:alr3406 KEGG:ns NR:ns ## COG: alr3406 COG1106 # Protein_GI_number: 17230898 # Func_class: R General function prediction only # Function: Predicted ATPases # Organism: Nostoc sp. PCC 7120 # 1 428 1 447 463 151 29.0 3e-36 MLIQFISENFRSLKKEQTLSLVRSSGNEMPDNFFQTTAAATPELLKSAVIYGANASGKSN VIKALGSMLHIIQNSFSKKINRPIETESFLFDALSRNEPTLYDISIIVPLTNEEGSLQET RVDYGFVADKNMVYEEWLSVYPKGKEQNWFHREYKQEKSDYDWKMSTYFKGERESWKNQT RPDQLFFSSAVHLNSEQLKPIYESLSEEILIVRTDRISNELSKSLCKNSDKEKTILISLL KSAGIEVDDITFRKPKIRHEDFPKELPEIVKDKILKEIEEAIVAKTETFFVYFDGTDNPP EIPLHEESDGTQKLFEFAGLILAVLHNGNVLIIDELNKSLHPDLVRFLVKLFNSPLNKKN AQLIFTTHETSVLRKDLLRRDQIWFCEKEEDRGTHLYPLTDFKPHINREDIEEYYLHGRY GAKPMISNFEFPKDFWESE >gi|289656335|gb|ADEA01000032.1| GENE 8 6774 - 7118 110 114 aa, chain + ## HITS:1 COG:no KEGG:CJA_1583 NR:ns ## KEGG: CJA_1583 # Name: csm2 # Def: CRISPR-associated protein, Csm2 family # Organism: C.japonicus # Pathway: not_defined # 12 113 124 220 221 70 36.0 3e-11 MNMIKDKNLELIISYPSFEYWYLCHFKYSRAPITRSGTRSSGDNCVATLNAEWKKVFGNE YEKNTENLYEILHDKLEIALSNAAKSLKAAESEEESNPSTKVHILVDYLRKLKI >gi|289656335|gb|ADEA01000032.1| GENE 9 7137 - 8042 1231 301 aa, chain + ## HITS:1 COG:RSp1126 KEGG:ns NR:ns ## COG: RSp1126 COG0583 # Protein_GI_number: 17549347 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Ralstonia solanacearum # 1 286 3 290 323 138 32.0 2e-32 MDKLNALKYFCSAAETLQFRETALRLSVSPQVVTRVIAELEQHLGKQLFTRNTRNIHLTE FGAAFLPRAQQLLADSENLFSAAKEKDEIRGIVRITVPQWNDNGRILARLLEKCADYPEL YIDWRSNDAKLNAVENQLDIGIRIGTQAEDLMIVRKICDITDKIVASPAYLARHGTPQSL DELTSRFPASSLINANTNRPWGWPLNAEMHVFPKNLRFITDDPANELAAALTGSVAAYIP EHLCRIHLQNGELLELFPEIPRRPWQLYIYRPQRTVTSGRVLKVFDWLTEVLREMYGKEA T >gi|289656335|gb|ADEA01000032.1| GENE 10 8231 - 9256 991 341 aa, chain + ## HITS:1 COG:ECs5357 KEGG:ns NR:ns ## COG: ECs5357 COG0642 # Protein_GI_number: 15834611 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli O157:H7 # 36 315 189 467 474 187 38.0 2e-47 MLKYFKHLSIRLFFVSLGILLLLTAWSLAYAKQHISLLLTASLLVLGTLAWWLARSINRI RRYAEAMAANRTAIKPQFGDSYLYRLVNAVAHLREELDHRQHIENYVLGLTHELKTPLTA QQAALELLQDGGLSPEQQQLVTRIVRNTQKQKQLIARLLELARLENRDSLQTVQTVDLAA LSAKAADECRAALHAKNLQIALDCRQKHPVQGDPLLIRQAVDNLLYNAIDFAAGHSEIKI SLAENSKQIELCVYNRGEPVPEFALDKIPQRFYSLPRADGARSSGLGLNFVSEIMRLHHG GFVLRNHGNGVLASLIFTVGNDGILPKVETVTHGHSYTKHC >gi|289656335|gb|ADEA01000032.1| GENE 11 9521 - 10501 1051 326 aa, chain + ## HITS:1 COG:NMA2079 KEGG:ns NR:ns ## COG: NMA2079 COG3087 # Protein_GI_number: 15794955 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division protein # Organism: Neisseria meningitidis Z2491 # 1 326 3 287 289 113 37.0 6e-25 MKKQTQHGKGLSGFFSGLLLATAVIIGILFFLNKENRGGFKEVKPAKEVSETEVLQPKGN RTKPKQEEEPETVPDQGGVAGGESKPETDKETPSQTATKQAEPETVPEVGGETSKPVVAE PKTEAKPQHQAGEVAGSEAVAQEASSAKPETGKTVEPKTETEKKTAGLTDKQKARIERKL AEKKAAEKKAAEHKAAAKKDSGQKESKPTPEQILNSGSIEKARAEHKAAQTKEEAKKAVS GDNSAKASSGGRKVVLQMGSYVDRKSAETQRAKLAMMGISSSVVESTANGKDVYRVQSAA MAQDDAKNVQQTLQKHGVNSFARSVK >gi|289656335|gb|ADEA01000032.1| GENE 12 10511 - 11203 1013 230 aa, chain + ## HITS:1 COG:NMB0407 KEGG:ns NR:ns ## COG: NMB0407 COG0526 # Protein_GI_number: 15676320 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Neisseria meningitidis MC58 # 13 207 12 206 214 247 64.0 1e-65 MKLKTALAGIALSALLPVSAQAAVEGKDYTVLPKPIPQQQADKIEVLEFFGYFCVHCYHL DPVLLNHSKTFAKDTYLRTEHVVWQPEMLGLARVAAAVDDSGLKRQANSAIFQAVYEQKI NLADSATFKQWAQAQKSFDGKKLIAAYDSPASLNRAKKMEELTVAYRIGSTPTVIVGGKY QVKFGNDWNAGMKTIDELVEKVRGEGKTRAEDSKSAPKSKGASFARSANH >gi|289656335|gb|ADEA01000032.1| GENE 13 11335 - 12159 1176 274 aa, chain + ## HITS:1 COG:NMA2077 KEGG:ns NR:ns ## COG: NMA2077 COG1968 # Protein_GI_number: 15794953 # Func_class: V Defense mechanisms # Function: Uncharacterized bacitracin resistance protein # Organism: Neisseria meningitidis Z2491 # 1 272 1 272 273 397 74.0 1e-111 MDILLLLKALILGVVEGLTEFLPISSTGHLIVLGDLLNFHSNGKVFEIAIQLGAVLAVIF EYRQRFADIISGLGRDRKANRFVLNLAVAFVPAAVVGLLFSKQIKLYLFNPITVAAMLVL GGFFILWVEKHQSKKKPKVMNVDDMRPIDAFVVGCAQICALVPGTSRSGSTIMGGMLWGL ERKTATEFSFFLAVPMMIAATGYDVLKHYKLFTMQDIGLIAAGFVAAFLAGLLAVKALLK FVASKNYVPFAYYRIVFGGLILFTWAMGWVNWAE >gi|289656335|gb|ADEA01000032.1| GENE 14 12250 - 12600 432 116 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298370213|ref|ZP_06981529.1| ## NR: gi|298370213|ref|ZP_06981529.1| hypothetical protein HMPREF9016_01548 [Neisseria sp. oral taxon 014 str. F0314] # 1 116 1 116 116 213 100.0 4e-54 MNKHAAVLLPLLFLAACGSYKAVRPSVQTPVVAESQTYSVNYKAAKGQRITAVYINGSSP MTVELRQGNTVEKLKQVRSWAKGVEYSNLSTRWHVQEGFATLKRKNKQTVFTEIIE >gi|289656335|gb|ADEA01000032.1| GENE 15 12616 - 12810 265 64 aa, chain - ## HITS:1 COG:NMA0721 KEGG:ns NR:ns ## COG: NMA0721 COG4391 # Protein_GI_number: 15793698 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 64 1 66 67 63 52.0 8e-11 MNNQNNPVIITPRDLPLHCSGPEHADSWNGHPRVFLPIQSDGDIECPYCGTYYHLEGKIH PHHY >gi|289656335|gb|ADEA01000032.1| GENE 16 12997 - 13926 1635 309 aa, chain - ## HITS:1 COG:RSc0567 KEGG:ns NR:ns ## COG: RSc0567 COG0115 # Protein_GI_number: 17545286 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase # Organism: Ralstonia solanacearum # 4 306 3 307 309 429 66.0 1e-120 MALSMDDRDGKIWFNGELVEWRSATTHVLTHTLHYGMGVFEGVRAYETPDGSAIFRLQDH TKRLFNSAKIVGMQLPFTEEQINRAHIDVVKANNLASCYFRPMAYYGSGKLGVAPKQDDV QVILAAWAWGAYLGEEGMRKGIRVRVSSFTRHHPNVTMIKAKANGNYMNSIMANTEATRD GYDEAILLDAQGYVAEGSGENIFTVRDGVLYTPALDVALDGITRRSVIAIASEMGLKVVE KRLTRDELYVADEVFFTGTAAEVTPIREIDGRQIGIGERGPITAEIQQRYFDIVQGKNPK YRDWLTYVK >gi|289656335|gb|ADEA01000032.1| GENE 17 14194 - 15450 1392 418 aa, chain - ## HITS:1 COG:NMB0456 KEGG:ns NR:ns ## COG: NMB0456 COG0860 # Protein_GI_number: 15676367 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylmuramoyl-L-alanine amidase # Organism: Neisseria meningitidis MC58 # 1 418 1 415 416 567 70.0 1e-161 MVKLTRRQIVRQAAGFLFVLTPISAALAKASPPPQFAAVRIWPAQAYTRITIEATRALSY QHFTLDNPSRLVVDIGGASINSVLQGISSKVQPSDPYIRSVRAGQNTPTTVRVVIDLKQS VNAQVFTLTPVGGFKYRLVIDLYPQHTANSDDPMMALLNGNVPPPQTPRPSQQPEQEPYV PSETAPRRGGRRPIVMLDPGHGGEDPGAISAGGLREKHVVLSIAREAKRRLESLGYTVYM TRNEDVFIPLNVRVAKARARRADVFVSIHADSFTNPTARGTGVYILNPRGASSAAAKFLA QTQNNADAVGGVQSSGNRHVDNAILDMTQTATMKDSRRLGQSVLSQLGQLNKLHKGRVDE ANFAVLKAPDIPSILVETAFLSNPDEERLLASASFRQQCAQAITTGIQRYLNTAALRR >gi|289656335|gb|ADEA01000032.1| GENE 18 15438 - 15908 607 156 aa, chain - ## HITS:1 COG:NMA2027 KEGG:ns NR:ns ## COG: NMA2027 COG0802 # Protein_GI_number: 15794907 # Func_class: R General function prediction only # Function: Predicted ATPase or kinase # Organism: Neisseria meningitidis Z2491 # 7 151 7 151 153 219 73.0 1e-57 MDFGAPVSRFLPDEEATLQLGADWAGTLAAPLTVYLQGSLGAGKTTFTRGLLRGLGYAGA VKSPTYTIVESYILPQFALHHFDLYRFASPEEWEDAGLDELFASDCVCLIEWPQQGGGFT PPADITVSLNHTDGGRACTLTAHTANGRKSLEAWLN >gi|289656335|gb|ADEA01000032.1| GENE 19 16158 - 16967 1254 269 aa, chain + ## HITS:1 COG:NMA2026 KEGG:ns NR:ns ## COG: NMA2026 COG0796 # Protein_GI_number: 15794906 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glutamate racemase # Organism: Neisseria meningitidis Z2491 # 5 269 6 270 270 454 86.0 1e-128 MSTSKQRPIGVFDSGVGGLTNVRALMERLPMENIVYFGDTARVPYGTKSRATIETFALQI VDFLLEQDVKALIIACNTIAAVAGQKIRQKAGNMPVLDVISAGAEAALSTTRNNRIGIIA TNTTVNSNAYARAIHSRNPDTLVRTQAAALLVPLVEEGWLDHEVTRLTAREYLKPLLVDN IDTLVLGCTHFPLLKPLIRQEAPDVTLVDSAITTAEAAAKALAQAGLLNTDNPEPDYRFY VSDIPLRFRTIGERFLGRSMEQIEMVTLG >gi|289656335|gb|ADEA01000032.1| GENE 20 17120 - 19051 3031 643 aa, chain - ## HITS:1 COG:NMA0736 KEGG:ns NR:ns ## COG: NMA0736 COG0443 # Protein_GI_number: 15793712 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Neisseria meningitidis Z2491 # 1 643 1 642 642 1042 98.0 0 MAKVIGIDLGTTNSCLAISENGQTKVIENAEGARTTPSVIAYLDGGEILVGAPAKRQAVT NAKNTIYAAKRLIGHKFEDKEVQRDIESMPFEIIKANNGDAWVKAQGKELSPPQISAEVL RKMKEAAEAYLGEKVTEAVITVPAYFNDSQRQATKDAGRIAGLDVKRIINEPTAAALAFG MDKGDNKDRKVAVYDLGGGTFDISIIEIANLDGDKQFEVLATNGDTFLGGEDFDQRLIDH IIAEFKKEQGIDLKQDVMALQRLKEAAEKAKIELSSGQQTEINLPYITMDATGPKHLAMK ITRAKFESLVEDLIARSIEPCKIALKDAGLSTSDIDDVILVGGQSRMPKVQEAVRDFFGK EPRKDVNPDEAVAVGAAIQGEVLSGGRSDVLLLDVTPLSLGIETMGGVMTKLIQKNTTIP TKASQVFSTAEDNQSAVTIHVLQGERERASANKSLGQFNLGDIAPAPRGMPQIEVTFDID ANGILHVSAKDKGTGKAANITIQGSSGLSEEEIERMVKDAEANAEEDKKLTELVASRNQA EALIHSVKKSLADYGDKLDAAEKEKIEAALKEAEEAVKGDDKAAIDDKAEALGAASQKLG EMVYAQAQAEAQAGESAQAEPSSAKKDDDVVDADFEEVKDDKK >gi|289656335|gb|ADEA01000032.1| GENE 21 19349 - 19891 988 180 aa, chain - ## HITS:1 COG:NMA0744 KEGG:ns NR:ns ## COG: NMA0744 COG0576 # Protein_GI_number: 15793719 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone GrpE (heat shock protein) # Organism: Neisseria meningitidis Z2491 # 3 180 15 192 192 223 79.0 1e-58 MTEQNQPVEEETVTPEADTVQPEPQEPPTYEELQARIAELEGQLKDSELRGLANEQNLRR RHQQEIADTHKFAGQKFAAEMLPVKDYLEMALLDQSGNFDALKMGVQMTLNELQKAFDTT HIKEINPQPGDKLDPHQHQAMQTVVSEQEPNTIVSVMKKGYTLSDRVLRPAMVVVAKKEA >gi|289656335|gb|ADEA01000032.1| GENE 22 20066 - 20884 1333 272 aa, chain + ## HITS:1 COG:NMA0742 KEGG:ns NR:ns ## COG: NMA0742 COG1045 # Protein_GI_number: 15793718 # Func_class: E Amino acid transport and metabolism # Function: Serine acetyltransferase # Organism: Neisseria meningitidis Z2491 # 1 272 1 272 272 492 88.0 1e-139 MKKDHLNTTDFDLWHTIREETETAAAAEPMLASFLHQTVLRHDSLDSVLAYHLSSKLGSL IMDVRALFEIYQQALGSDARISNCVEADLKAIYERDPACDEYSLPLLYFKGFHAIQAHRI NHWLYQNGRKTLAYFLQNRMSEVFGVDIHPAARFGHGLMLDHATGFVAGETAVLGNNISI LHGVTLGGSGKECGDRHPKIGDGVMIGANASILGNIRIGTNAKIGAGSVVVADVPSSITV VGVPAKPVGRSVKAPSADMDQNIDLSGVEFII >gi|289656335|gb|ADEA01000032.1| GENE 23 20973 - 21851 799 292 aa, chain - ## HITS:1 COG:NMB1801 KEGG:ns NR:ns ## COG: NMB1801 COG1560 # Protein_GI_number: 15677639 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lauroyl/myristoyl acyltransferase # Organism: Neisseria meningitidis MC58 # 21 283 36 298 298 416 76.0 1e-116 MQTLIIILFKLFSLLPLKFLHALGSFWGGIACRIMSEDRRRVIDNLTAAQLPADDRTVKA VFQETAKGGLELPVAFFRRPERIETLFKAVYGWEHVQTALDAGEGLLFITPHIGSYDLAG RYISQQLPFPLTAMYKPPKFKAMDAVMQAGRVRGKGKTAPTNMQGVKQVIKALRAGEATI VLPDHVPSPEEGGDGVWTEFFGKPAYTMTLAGKLAQVKGVKALFFCGERLPDGQGFALHI EPLRGELNGDKEHDARIVNENTEYWIRRFPTQYLFMYNRYKHPAGAPLPPQR >gi|289656335|gb|ADEA01000032.1| GENE 24 22266 - 23435 1768 389 aa, chain + ## HITS:1 COG:NMA0663 KEGG:ns NR:ns ## COG: NMA0663 COG0192 # Protein_GI_number: 15793647 # Func_class: H Coenzyme transport and metabolism # Function: S-adenosylmethionine synthetase # Organism: Neisseria meningitidis Z2491 # 1 389 1 389 389 653 85.0 0 MSEYLFTSESVSEGHPDKVADQISDAVLDAVLAQDPKARVAAETLVATDLCVLAGEITTT AKVDYEKIARETIARIGYRSPDLGFSSDSCKVLLNYGQQSPDIAQGVNEGEGLDLEQGAG DQGLMFGYACDETPVLMPFAIYYSHRLMQRQSELRRNGSLPWLRPDAKAQITAVYDSKTG KVKRIDTVVLSTQHDEGISYDKLREAVIEQIIKPVLPSEMLTEETKYLVNPTGKFIIGGP HGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYACRYVAKNIVAAGLASQCQ IQISYAIGIAEPTSISIDTFGTGKLNETELIKLVREHFDLRPKGIVQMLDLLRPIYGKTA AYGHFGREEPEFTWERTDKAITLKAAAGL >gi|289656335|gb|ADEA01000032.1| GENE 25 23607 - 23900 581 97 aa, chain + ## HITS:1 COG:NMA2081 KEGG:ns NR:ns ## COG: NMA2081 COG2960 # Protein_GI_number: 15794957 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 77 12 88 117 108 83.0 3e-24 MFGKHIFEEVTSKLGETIANSPAKDVEKNVKAMLSSAFNRMDLVTREEFDIQQQVLIKTR TKLVELEERLAKLESARTSEETVSETAETTGQTKPIE >gi|289656335|gb|ADEA01000032.1| GENE 26 23984 - 25483 863 499 aa, chain - ## HITS:1 COG:NMA2080 KEGG:ns NR:ns ## COG: NMA2080 COG0606 # Protein_GI_number: 15794956 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATPase with chaperone activity # Organism: Neisseria meningitidis Z2491 # 1 499 1 498 498 719 75.0 0 MSFAVVNSRALCGMSAPLVEVEVHLANGLPQFNIVGLPDTEVKESRDRVRAAIIQSGFDF PAKKITVNLAPADLPKESGRFDLPIAIGVLAASGQIDAADLAKYEFAGELALSGVLRPIR GGLAMAWQAQQACRRFVLPSENAVQAAIMKNIEVYGAGSLGEVAAHLNNVIRLSQTVAVA QPQTDETTLPLPDLKDVKGQHTARLALEIAAAGGHSLLMMGPPGTGKSMLAQRLPSILPP LTDEELISVWALHSLLPQHSQKTDNSRPYKAPHHSASAVALVGGGSDPRPGEISLAHKGI LFLDELPEFDRKVLEALREPMESGEIHISRAARQAVFPAEFQLVAAMNPCPCGFYGHPVK PCRCTPDSIQRYRNKISGPLLDRLDLIIEVPALPAADLVQAQAGESSAEVLKRVVRARER QYVRQGKLNSGLSPTELDNIAAIPKEARETLAAMLEKLSLSARSFHRILRAARTIADLEG SGEVLRAHVLKAVGFRRTM >gi|289656335|gb|ADEA01000032.1| GENE 27 26116 - 26475 294 119 aa, chain - ## HITS:1 COG:NMA2006 KEGG:ns NR:ns ## COG: NMA2006 COG2018 # Protein_GI_number: 15794886 # Func_class: R General function prediction only # Function: Uncharacterized distant relative of homeotic protein bithoraxoid # Organism: Neisseria meningitidis Z2491 # 1 119 1 119 119 165 81.0 2e-41 MQQLLISVLSDLNNTSVDIIASAVISTDGLPIATLLPNHLNADRVGAMSATLLALGNRSV HELACGELDQVMVKGKNGYILLSQAGDNAVLALIAKESGKLGLILLDAKRAAKHIAEIL >gi|289656335|gb|ADEA01000032.1| GENE 28 26525 - 27166 102 213 aa, chain - ## HITS:1 COG:no KEGG:NMC1670 NR:ns ## KEGG: NMC1670 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 213 1 213 214 314 71.0 1e-84 METTLSLQSNLYPKVTPAGAYYAVSGDTPSASRTLLYGLLRAEPTEAISSEKILAWTDTS DINTALNLLYRLQRLEFLYGDENVGTDDIHLTDEQLPDVLAPLSNSGKALLADEKGLYFA NVGFHHEAAEELGLLASKVAKMESDHQLLIRNNLHINNSAWGVCDPSGQSELTFFPLYIG TTKLILVIGGMPDLNKEAFVTLVKVLYHRYGSR >gi|289656335|gb|ADEA01000032.1| GENE 29 27173 - 27709 549 178 aa, chain - ## HITS:1 COG:NMA2008 KEGG:ns NR:ns ## COG: NMA2008 COG2229 # Protein_GI_number: 15794888 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Neisseria meningitidis Z2491 # 1 178 1 178 178 299 83.0 2e-81 MKENKIIFTGPVGVGKTTAISALSDEPPVQTDADASDMTLVRKGYTTVAMDYGVIHLDEE TKVHLYGTPGQERFNFMWEILSQGSMGLVLLLDNTRTNPLKDLQFFLDAFKELLKSAPLV VGVTKMDIRSLPGVDVYQKYLAQNNFNVPVFEIDARREDDVKQLVSAMLFSIDPGLEV >gi|289656335|gb|ADEA01000032.1| GENE 30 27722 - 28825 406 367 aa, chain - ## HITS:1 COG:no KEGG:NMB0476 NR:ns ## KEGG: NMB0476 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis # Pathway: not_defined # 1 365 1 364 365 421 59.0 1e-116 MDNLFPKIKTIRIMLQEVGEQQEAVFRMAFKMHNTTNYEIVTSESVDQPDLILVDTDTEK GIEVWKTLKKEYPTVPVAMFSSAEPNVITPYLPKPIKFDTLFPILRSLSQGGNVFEPSSH QSEGSTDNEDKQITSRKAVIRRFNPQKGLLGALKFASQGHQDIAVLHDGKPVLIVFPSIQ RVLLTISTTDLEKLCKDDDVSVICKAVPDNPQWKEKAKVTIMSCLWQMAIWTAQGRLIYP MTPHTVFTLKRWPNLTRLAHVPESMRLSAFLTKTSVNLNILYKVMPLEMPDILNYLAATS ITGFLATDSEYATEQANVSAVATEQISVNSDVPDDQMAKDAEKMAGPSKEQPRGLLQRLM RKLLGKH >gi|289656335|gb|ADEA01000032.1| GENE 31 28848 - 30272 413 474 aa, chain - ## HITS:1 COG:no KEGG:NMO_1567 NR:ns ## KEGG: NMO_1567 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 13 474 21 474 478 474 54.0 1e-132 MLALLLLVLLFARHKQGSSAAGRSAKVAKASQNHHQIQADEVSENEDWMDKVNQSVSNAG VQDWEWGDGGSSTSATSVSAQEVDPLTEYQVYKQFGYESKAAESLAGYLNNLTDTAPEKL VHELIGLNLRVGNIDMLAETLDRHGAVLTEDALVEYIKAGLMVEPNHLHLRVLAESKLGW NIQEVSRQIGEKTGLEENNASNPTLTIESNNQSVATNSSKRVPIVVGQTEFDNITPEEMS AVIGFVKPEQSAKILKDKVSYETALQQYNRAIQHSPKPASLIIDALRLDYQNEEVGQFAK HLWKLYHSLGQYGRQVKERMLGWGYSLGYHDLFDDLEKGPTEQQIQKIGLERGYLQPTSS QVKAKYRDLVQKDSSIISVNSSPADEALKEVESLLMYGQLDQAIGTLEQAVLQYPQESQL YIVLFDLYERAEDWPRLEQFLRLLRERVVSLPEEVILAMSRLLQRVNQHSKKIK >gi|289656335|gb|ADEA01000032.1| GENE 32 31590 - 32594 334 334 aa, chain + ## HITS:1 COG:NMA2014 KEGG:ns NR:ns ## COG: NMA2014 COG1376 # Protein_GI_number: 15794894 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 11 334 25 344 358 376 61.0 1e-104 MKKIGIGLLTLPLAATAFAATPIPDVSPASEGQHVFINIPQQRLFIYTDGQLTKAYPVAV GKSMTQTTLGEHKIGVKAFNPTWHIPQSIQKERGDGVKSVPPGPKNPLGPVFVRLGDPKL GLGIHGTNTPASVPGIRSHGCVRMKSPDALEFATTITTGSPAYVIYQMASLNEDANKNLW LAAYRDPYNKKNLNTDALRKSIAAWAKANGKNINSKRIDAILKARTGTANCLTCAKGAKL TMPLKSLAWTNGSSVYSKPKFMPKPVPVQNDVLPAGSEIEVNADDFVPDKAASATFIPSN TSASDTQNHSRKPAGSTYTTTPIPENSEPTEVLF >gi|289656335|gb|ADEA01000032.1| GENE 33 32774 - 33820 392 348 aa, chain + ## HITS:1 COG:NMB1787 KEGG:ns NR:ns ## COG: NMB1787 COG0002 # Protein_GI_number: 15677627 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate semialdehyde dehydrogenase # Organism: Neisseria meningitidis MC58 # 1 348 1 347 347 553 72.0 1e-157 MSDKINVGIVGATGYTGVELLRLLTTHPNTKVTTVTSRSENGKIVSDHFPSLRGIYTLTF QSPEDAKLEECDVVFFATPNGVAMKEVPDLLAKGVRIIDLSADFRIHDITIWEKWYGMTH ACPHLVSQAVYGLCEMDKQDIAKAHLIANPGCYPTCVSLPLLPLLKQSCLKEDMPLIADC KSGVSGAGRKTSIGSLLCEAGDNFKAYNISGHRHLPEIQQTINKLQKNIAENFVFVPHLT PMIRGMQATIYLHLKEGTHPEEILRSYYKDNPFIDIMESGSMPETRSVRGANICRISIQR APQNNNVWIILSVIDNLVKGAAGQAVQNMNIMFGFNESMGLTNIPLLP >gi|289656335|gb|ADEA01000032.1| GENE 34 33982 - 34257 275 91 aa, chain - ## HITS:1 COG:no KEGG:NGK_1687 NR:ns ## KEGG: NGK_1687 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 21 91 20 90 90 71 50.0 1e-11 MTGYKKNTWLAVIALAMGFAAFPFSYSEAQSTDVSLSALECEEVAYSSLTQMNGRQQDFS KQCDIVEASHDWEEQYGSLNEQELVSGVVYE >gi|289656335|gb|ADEA01000032.1| GENE 35 34463 - 35158 719 231 aa, chain + ## HITS:1 COG:NMA0738 KEGG:ns NR:ns ## COG: NMA0738 COG2932 # Protein_GI_number: 15793714 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Neisseria meningitidis Z2491 # 1 231 1 228 228 389 81.0 1e-108 MDTFKDRLVFLWKNEAKQAKIAADIDMTIAGFSRIWNEGGLPKSETLKKIKQLKGCSIDW LLTGEGEPFPHSHLATESSATISDTLGNPVDIDEFVFIPRYDIQAAAGHGRLAGNEKPMF AMAFRRDWIENYVTRSTKNLSVISVKGDSMEGVLNDGDSILINHGETTPRDGLYVLRINE NLLVKRLQVMPGGIINVISANDAYPTFEIDLNHLTDDVAIIGRVEWFGRSI >gi|289656335|gb|ADEA01000032.1| GENE 36 35353 - 35691 400 112 aa, chain + ## HITS:1 COG:NMA0739 KEGG:ns NR:ns ## COG: NMA0739 COG0316 # Protein_GI_number: 15793715 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 1 112 1 112 112 212 96.0 2e-55 MSDESPIIFTDSCCTKVADLIAEENNPDLKLRVFVNGGGCSGFQYGFTFDEIKNDDDFEI QKSGLTFLVDPMSYQYLVGAEIDYTESLQGSQFVIRNPNAETTCGCGSSFSV >gi|289656335|gb|ADEA01000032.1| GENE 37 36029 - 36697 539 222 aa, chain + ## HITS:1 COG:no KEGG:NMCC_0504 NR:ns ## KEGG: NMCC_0504 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_053442 # Pathway: not_defined # 3 81 6 84 151 85 49.0 1e-15 MNKQKFYDVYVSYPPGENRERINDCLRDNLPENEAEDLIQALAERSQAIIAENCSQDERE NAQHYFNYLGLDVIVRQSMELTPNAKNEEEETTNKLHQCPVCRTIIDDQEATECSVCHFH FSTANEATIQRKRIEWEEKLAFEHKRQAEIEQKIQQEKEREEKLMRRQIRAELEEKLREE LAQNPNIAALDHQKRKTFLTGVFAAIGIFALMAIGYIAAKYL >gi|289656335|gb|ADEA01000032.1| GENE 38 36843 - 38363 1926 506 aa, chain + ## HITS:1 COG:NMB0559 KEGG:ns NR:ns ## COG: NMB0559 COG0661 # Protein_GI_number: 15676464 # Func_class: R General function prediction only # Function: Predicted unusual protein kinase # Organism: Neisseria meningitidis MC58 # 4 491 1 488 503 867 86.0 0 MTDMKWLNRIKTIIRTIYLYGLTDLFAGHIRQTWLRRLLETLPKSSQYADIPLPVRLRTA LESLGPIFVKFGQVLSTRPDLIPHNYALELAKLQDQVPPFDAQLSRAQIEKSLGQSVETL YAEFETEPVASASIAQVHKARLHSGEQVAVKVLRPNLLPVIEQDLSLMRFGAAWVERLFA DGKRLKPREVVAEFDKYLHDELDLMREAANASQLGRNFQNSDMLIVPKVFYDYCTRDVLT IEWMDGTPVSDIAKLKADGIDLHKLADYGVEIFFTQVFRDGFFHADMHPGNILVAADNRY IALDFGIVGTLTDYDKRYLAINFLAFFNRDYHRVATAHIESGWVPADTRAEELEAAVRTV CEPIFNKPISQISFGLVLMRLFEVSRRFHVEIQPQLVLLQKTLLNIEGLGRQLDPDLDLW ATAKPFLTRWMNEQIGPKAFLNNLKKEAPDWAEILPRLPRKLNMLVDENRQQEMRDAYVH LVRIQQRQSLWLAVIAVALLLILLFK >gi|289656335|gb|ADEA01000032.1| GENE 39 38452 - 39228 1042 258 aa, chain - ## HITS:1 COG:NMA0348 KEGG:ns NR:ns ## COG: NMA0348 COG0708 # Protein_GI_number: 15793359 # Func_class: L Replication, recombination and repair # Function: Exonuclease III # Organism: Neisseria meningitidis Z2491 # 1 257 1 257 259 511 95.0 1e-145 MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSADMKNPHGMHGHWHC AEKRGYSGVAVYSKRAPDNVQIGMGIEEFDREGRFVRCDFGKLSVISLYLPSGTSAPERQ ELKYRFLDAFYPMLEAMKAEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIG RVIRDLGWTDMWRTLYPDNPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHVYK DEKFSDHAPLVVEYDYAV >gi|289656335|gb|ADEA01000032.1| GENE 40 39385 - 40377 462 330 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163786851|ref|ZP_02181299.1| 50S ribosomal protein L32 [Flavobacteriales bacterium ALC-1] # 5 329 8 328 346 182 34 3e-45 MTLPILAITSGEPAGIGPDICLDLAQAGLPCRCVVLGDKDLLRRRAALLGKQITLRDFNP HRPSENPIRQGELEVWHIPLPDVCEAGRLNPANAPYVLQLLDTACRGVSDGLFAAMVTAP LHKGVINDGRASSRFFSGHTEYLAEKGGVEQVVMMLAGGGLRVALVTTHLPLKDVAAAVT QPLIESVGRILHHDLRTKFGIAAPRILTAGLNPHAGEGGHLGHEETDTVIPALENLRAEG IDIRGPYPADTVFQPFMLKDADAVLAMYHDQGLPVLKYASFGKGVNITLGLPFVRTSVDH GTALDLAGTGKASSGSLIVAVETALEMVRR >gi|289656335|gb|ADEA01000032.1| GENE 41 40498 - 41484 1417 328 aa, chain + ## HITS:1 COG:NMA0305 KEGG:ns NR:ns ## COG: NMA0305 COG0616 # Protein_GI_number: 15793318 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Periplasmic serine proteases (ClpP class) # Organism: Neisseria meningitidis Z2491 # 1 324 1 324 328 422 64.0 1e-118 MQYRIRREGDNTSDRPVDNWERNTLRDVLLEAYKEQRRARLWRNIWRGVAVVLFLILITD IGNNSEGGKKIVSASGAHTAVINLRGAIGDSEFDDQVKALRESMEAAYKNKNAKAIIIRA NSPGGSPVISNIAFNEIRRLKEAHKNIPVYVVAEEMCASGCYYIAAAADKIYADPSSVVG SIGVIGGGFDATGLMDKIGVKRRLKTAGSNKGMGDPFSPETPEQTKIWNAMLADIHGEFI KAVKLGRGSRLKEKENPDIFSGRIYTGIEAKQAGLIDDFGNIYSVARDVVKAPELVNYSP DDDFSKLLSRRLGMEMKMRLKEAMSKLW >gi|289656335|gb|ADEA01000032.1| GENE 42 41599 - 41844 428 81 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298370240|ref|ZP_06981556.1| ## NR: gi|298370240|ref|ZP_06981556.1| hypothetical protein HMPREF9016_01576 [Neisseria sp. oral taxon 014 str. F0314] # 1 81 2 82 82 131 100.0 1e-29 MKKSVFALILSASAAFAAANGAPQPEWNHANDSGPIAGLTEVKYPINPSSAKSDDRVKFT VDSTGTREDDGGYRYLGGGAR >gi|289656335|gb|ADEA01000032.1| GENE 43 42043 - 43359 1415 438 aa, chain - ## HITS:1 COG:NMA0580_1 KEGG:ns NR:ns ## COG: NMA0580_1 COG0548 # Protein_GI_number: 15793571 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate kinase # Organism: Neisseria meningitidis Z2491 # 7 286 7 283 283 272 54.0 1e-72 MNDTAGFVGGFREAAPYIHYLRGKTLVVGISDSLLSGETLTNLAADLNLLASLGVRLVVV HGSRTQINAIAQAHGIEPQYHNHRRITDETVLQYAKQASGILRSDIEAALCSSVSQTPQR SSPPAIASGNFLAAKPLGVIDGVDMGYTGIVRKTDTEAVRRRLDDGAVVLISPLGYSFSG KTFNLSMGETAEAVAVALHAEKLVYIVEQEGILDTEGCLITNLSAAEARQRIEARQICPN QTRLLLSAVKAVENGVGRTQILSGRHDGSLICELFTRNGAGTSVAQNSFVSIRKARSGDI PNIMEMIRPLAEQGILLRRSREYLENHIGSFSVIEHDCHIYGCVALKTFADPDCGELACL VVSPDARDGGYGEMLLEHLFQKARARRIRKLFALSTHTGEWFAERGFQAASADDLPEERR RDYMESGRNSRVFVYDLA >gi|289656335|gb|ADEA01000032.1| GENE 44 43356 - 43760 414 134 aa, chain - ## HITS:1 COG:no KEGG:NMCC_0346 NR:ns ## KEGG: NMCC_0346 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_053442 # Pathway: not_defined # 1 133 1 144 144 112 44.0 4e-24 MPACSCPRCHTQIWVKDEQLKIAQGFVVCTKCEGLFKATENIVDLKGKFQPEVLPTAMTD LRLSRGGKMPVQSQKQLSRNEIADLFDSFTVAPKPAAAAAAPAAERKNDTNWTLATLVAL TVLIIQLFYLVLLL >gi|289656335|gb|ADEA01000032.1| GENE 45 43917 - 44093 271 58 aa, chain - ## HITS:1 COG:NMA0582 KEGG:ns NR:ns ## COG: NMA0582 COG0461 # Protein_GI_number: 15793573 # Func_class: F Nucleotide transport and metabolism # Function: Orotate phosphoribosyltransferase # Organism: Neisseria meningitidis Z2491 # 1 56 156 211 213 96 83.0 1e-20 MEKGTGELSAVQEVERQYGLPVVPIANLNDLFTLLQNNAEFGGFLEPVKAYRERYGAA Prediction of potential genes in microbial genomes Time: Thu May 26 13:47:42 2011 Seq name: gi|289656334|gb|ADEA01000033.1| Neisseria sp. oral taxon 014 str. F0314 cont1.33, whole genome shotgun sequence Length of sequence - 32453 bp Number of predicted genes - 25, with homology - 24 Number of transcription units - 18, operones - 4 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 257 - 293 -0.1 1 1 Tu 1 . - CDS 311 - 952 960 ## COG0461 Orotate phosphoribosyltransferase - Prom 980 - 1039 3.9 2 2 Op 1 3/0.200 - CDS 1064 - 1714 784 ## COG0546 Predicted phosphatases 3 2 Op 2 . - CDS 1726 - 2724 221 ## PROTEIN SUPPORTED gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit - Prom 2800 - 2859 4.0 4 3 Tu 1 . + CDS 3413 - 6382 3986 ## COG1530 Ribonucleases G and E + Term 6403 - 6435 2.1 - Term 6421 - 6469 9.7 5 4 Tu 1 . - CDS 6497 - 7306 1215 ## COG0428 Predicted divalent heavy-metal cations transporter - Prom 7348 - 7407 5.1 + Prom 7324 - 7383 5.6 6 5 Tu 1 . + CDS 7569 - 7844 483 ## COG2924 Fe-S cluster protector protein + Term 7854 - 7906 10.5 - Term 7842 - 7894 12.2 7 6 Tu 1 . - CDS 7895 - 8116 118 ## - Prom 8225 - 8284 7.0 8 7 Tu 1 . + CDS 8420 - 9322 781 ## COG1575 1,4-dihydroxy-2-naphthoate octaprenyltransferase + Term 9364 - 9399 -0.9 + Prom 9330 - 9389 3.6 9 8 Tu 1 . + CDS 9426 - 10112 1316 ## COG0670 Integral membrane protein, interacts with FtsH + Term 10145 - 10185 12.2 + Prom 10155 - 10214 3.0 10 9 Tu 1 . + CDS 10238 - 10753 879 ## COG0669 Phosphopantetheine adenylyltransferase + Term 10817 - 10848 4.1 - TRNA 10892 - 10968 85.8 # Met CAT 0 0 + Prom 11114 - 11173 7.0 11 10 Op 1 . + CDS 11201 - 12595 1902 ## COG1643 HrpA-like helicases 12 10 Op 2 . + CDS 12674 - 14344 837 ## COG1479 Uncharacterized conserved protein 13 10 Op 3 1/0.200 + CDS 14409 - 15944 1280 ## COG1643 HrpA-like helicases 14 10 Op 4 . + CDS 15809 - 17572 2303 ## COG1643 HrpA-like helicases 15 10 Op 5 . + CDS 17598 - 18539 494 ## Sez_1539 hypothetical protein + Term 18578 - 18625 -0.2 + Prom 19865 - 19924 6.7 16 11 Tu 1 . + CDS 20167 - 20754 106 ## gi|298370257|ref|ZP_06981573.1| conserved hypothetical protein + Term 20868 - 20920 15.1 - Term 20856 - 20907 18.3 17 12 Tu 1 . - CDS 20933 - 21862 1556 ## COG2326 Uncharacterized conserved protein - Prom 21902 - 21961 6.0 + Prom 21894 - 21953 5.5 18 13 Tu 1 . + CDS 22026 - 23921 2087 ## COG0147 Anthranilate/para-aminobenzoate synthases component I + Term 24040 - 24080 12.2 - Term 24023 - 24074 13.2 19 14 Op 1 27/0.000 - CDS 24094 - 25341 2101 ## COG0304 3-oxoacyl-(acyl-carrier-protein) synthase - Prom 25422 - 25481 3.3 - Term 25454 - 25493 4.4 20 14 Op 2 . - CDS 25515 - 25751 397 ## COG0236 Acyl carrier protein - Prom 25801 - 25860 5.5 + Prom 25871 - 25930 4.5 21 15 Tu 1 . + CDS 26159 - 26338 233 ## gi|255068067|ref|ZP_05319922.1| HLA class II histocompatibility antigen, DO beta chain 22 16 Tu 1 . - CDS 26488 - 28509 2727 ## COG1505 Serine proteases of the peptidase family S9A - Prom 28538 - 28597 6.4 23 17 Tu 1 . - CDS 28904 - 30880 1233 ## COG0457 FOG: TPR repeat - Prom 30921 - 30980 3.4 - Term 31189 - 31230 11.3 24 18 Op 1 2/0.200 - CDS 31250 - 32032 1419 ## COG0134 Indole-3-glycerol phosphate synthase 25 18 Op 2 . - CDS 32110 - 32448 260 ## COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold Predicted protein(s) >gi|289656334|gb|ADEA01000033.1| GENE 1 311 - 952 960 213 aa, chain - ## HITS:1 COG:NMA0582 KEGG:ns NR:ns ## COG: NMA0582 COG0461 # Protein_GI_number: 15793573 # Func_class: F Nucleotide transport and metabolism # Function: Orotate phosphoribosyltransferase # Organism: Neisseria meningitidis Z2491 # 1 211 1 211 213 353 90.0 1e-97 MSDFRQDFLKFALQQNVLKFGEFTTKAGRQSPYFFNAGLFNDGASTLQLAKFYAQAVIES GVKFDMLFGPAYKGIILAAATAMMLAERGVNVPFAYNRKEAKDHGEGGVLVGAPLKGRVL IIDDVISAGTSVRESVKLIEAEGATPAAVAIALDRMEKGTGELSAVQEVERQYGLPVVPI ANLNDLFTLLQNNAEFGGFLEPVKAYRERYGAA >gi|289656334|gb|ADEA01000033.1| GENE 2 1064 - 1714 784 216 aa, chain - ## HITS:1 COG:NMB1830 KEGG:ns NR:ns ## COG: NMB1830 COG0546 # Protein_GI_number: 15677666 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Neisseria meningitidis MC58 # 3 214 4 215 219 256 66.0 3e-68 MQPKLIIFDWDGTLADTTNPIIATFRQSFADCGLPVPEADRIRPLIGYSLPAIVRHLIPD ADGRVQAAVVETYASHYLNPNNHNMKLFDSAVPCLNTLKGQGYLLAVATGKGRTGLDRAI GQTGTAHFWAATTCASEQPSKPAPEMVFALCDALGLMPSETLVVGDTTYDLQMAANAKAS AVAVATGAHAKAQLAAEPCLAVLDGLAELPALLAAL >gi|289656334|gb|ADEA01000033.1| GENE 3 1726 - 2724 221 332 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit [Lactobacillus helveticus DPC 4571] # 25 317 18 281 285 89 28 2e-17 MKTHAISKDSVSLIGVAEHEAGQRLDNYLIKILKGVPKSHIHRIIRAGEVRLNKKRCKPD SRIQAGDLLRIPPVRTAEKQRPSENRVQAAPAREFDIVYEDDALLVINKPSGTAVHGGSG VSFGVIEQIRRARPEARYLELVHRLDKDTSGLLMIAKKRSALVRLHEAIRNDRPKKIYLA LGVGRLENDRFHVKLPLFKYTGAQGEKMVRVSEDGQSAHTVFRVLNRFSDGLLHQAGLSH LTLVEATLKTGRTHQIRVHLQSQHCPIAGDERYGDYQANKRLQKLGLKRMFLHASELHLD HPLTGEKLVLKADLPQELQQFTVMLENRHEAV >gi|289656334|gb|ADEA01000033.1| GENE 4 3413 - 6382 3986 989 aa, chain + ## HITS:1 COG:NMB0196 KEGG:ns NR:ns ## COG: NMB0196 COG1530 # Protein_GI_number: 15676123 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonucleases G and E # Organism: Neisseria meningitidis MC58 # 1 988 1 918 919 1101 69.0 0 MKRMLFNATQAEELRVAIVDGQNLLDLDIETLGKEQRKGNIYKGVITRIEPSLEACFVDY GTDRHGFLPFKEVSRSYFQDYEGGRARIQDVLKEGMEVIVQVEKDERGNKGAALTTFISL AGRYLVLMPNNPRGGGVSRRIEGEERQELKAAMAELDIPNGMSIIARTAGIGRSAEELEW DLNYLKQLWQAIEEAGKAHHDPYLLFMESSLLIRAIRDYYRPDIGEILVDNQEVHDQVAE FMSYVMPNNVGRLKLYQDHTPLFSRFQIEHQIESAFARSVSLPSGGAIVIDHTEALVSID VNSARATRGADIEDTAFKTNMEAAEEVARQMRLRDLGGLVVIDFIDMENPKHQRDVENVL RDALKKDRARVQMGKLSRFGLLELSRQRLKPALGESSHVACPRCAGTGVIRGIESTALHV LRIIQEEAMKDNTGEVHAQVPVDVATFLLNEKRAELFAMEERLDVNVVLIPNIHLENPHY EINRIRIDDVEEDGEPSYKRVAEPEEDESAKPFGSERAKAARPEPAVKGVRHTQPAPTVS GERQASWWDNFKAWLSRIFGNTPAPETAKAAEPEKSEKRSADSSRGSNRRGNSRRQNPRR SNKRDGSKVEVQEINARAEETKDESKTLEQEESGRENNRSKRSRSNRSNKAEERAVAQAA SNAANAAAETERPSENAPQPVGNRKRGGRNNKAAEAAAAAVEALEAENIADVEISEAVEA VEAVETETVEQPRSNRDRRERSGSRNQRDRRNNGKKRNIPSAKKIEQYLNITDTAEKVRF AADHVLGVAAAQPLSVAISVPQDAEEPAALQDTAADAPLVVVVPEPVINTAAAENAEPVL FVTESNDIGATVEQTTDDEQAAIDSAIGSIDAAASSVLAADDEYSFQRMTAVPTSEDEQA VQEMENALRHIQSAAQTAADTETETAAAEQPAADLVGLVQIETDSTAIAAFADQPQAEKA AGLRRADIPKAQATADADVEMVLVETHKS >gi|289656334|gb|ADEA01000033.1| GENE 5 6497 - 7306 1215 269 aa, chain - ## HITS:1 COG:NMB0175 KEGG:ns NR:ns ## COG: NMB0175 COG0428 # Protein_GI_number: 15676102 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted divalent heavy-metal cations transporter # Organism: Neisseria meningitidis MC58 # 1 269 1 269 269 421 88.0 1e-118 MFEITFSNIAIAFGISLAAGLFTVLGSGLVMFSKTPNPRVLSFGLAFAGGAMVYVSLTEI FNKSSEAFAQVYDKDKAFAAATLAFLAGMGSIALIDRIVPNPHETLDPHDPAFQENKRRH IARVGMMAAFAITAHNFPEGLATFFATLENPAVGMPLALAIAIHNIPEGISIAAPVYFAT RNRKKTVLACLASGLAEPLGAVLGYTMLKPFLSPFVFGAVFGVIAGVMVFLALDELLPAA KRYSDGHETVYGLTSGMAVIALSLVLFHF >gi|289656334|gb|ADEA01000033.1| GENE 6 7569 - 7844 483 91 aa, chain + ## HITS:1 COG:NMA0419 KEGG:ns NR:ns ## COG: NMA0419 COG2924 # Protein_GI_number: 15793424 # Func_class: C Energy production and conversion; O Posttranslational modification, protein turnover, chaperones # Function: Fe-S cluster protector protein # Organism: Neisseria meningitidis Z2491 # 1 88 1 88 88 157 87.0 5e-39 MTRMVHCVKLGKEAPGLKFPPLPNELGKRVYENVSQEAWNAWTRHQTMLINENRLSLADP RAREYLAQQMENFFFGDGADQVQGYVPQEPK >gi|289656334|gb|ADEA01000033.1| GENE 7 7895 - 8116 118 73 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKFTRFILGTALFYFVFSFAALYFFIVNDFVWSLMISLISTVIFVPANIALQKFLNGNR FSRPVRSRRQSDK >gi|289656334|gb|ADEA01000033.1| GENE 8 8420 - 9322 781 300 aa, chain + ## HITS:1 COG:HI0509 KEGG:ns NR:ns ## COG: HI0509 COG1575 # Protein_GI_number: 16272453 # Func_class: H Coenzyme transport and metabolism # Function: 1,4-dihydroxy-2-naphthoate octaprenyltransferase # Organism: Haemophilus influenzae # 3 291 11 296 308 176 38.0 6e-44 MAIRYWLQAARPRTLPLALSGALLGSLLASLQHRTNAAVTLLCAATAAALQVFGNLANDY GDARSGADSPLRQGPERMVASGRISPAAMRFGLILSALSCILLGTALLAAALPVPCSGWQ SWLFWLLAGTASLAAAYCYTAGCKPYGYIGLGDLAVFVFFGLLSVCGSEFLHTGRLNPAS LTPAAAMGLWCCMILNLNNMRDINSDLRAGKHTVAARLRLPRAKRYHTALATTAALLWCA WLPACFHGAPLYAFQTALAAASLTHLYFLKKAQSPSELDKLLPQWSAAVLLWVAALWLCR >gi|289656334|gb|ADEA01000033.1| GENE 9 9426 - 10112 1316 228 aa, chain + ## HITS:1 COG:NMA0420 KEGG:ns NR:ns ## COG: NMA0420 COG0670 # Protein_GI_number: 15793425 # Func_class: R General function prediction only # Function: Integral membrane protein, interacts with FtsH # Organism: Neisseria meningitidis Z2491 # 1 228 1 227 227 263 73.0 1e-70 MQNDVYDYTSAGSVQKNTVLRKTYSLLALSFVPAAIGALVSGKMGFSLYAMLGGRWMSFI VVMAFFYGMIFLIEKNRYSNVGATLLMVFTFGMGVLLSPLLQYALNFSNGTQIVGIASVM TAAVFFTMSAMARRTTMNMNSLGRFLTVGAVVLMIAVVANFVLQIPALSLTISAGFVLFS SLMIMWQVRTVIDGGEDSHISAALTIFISLYNIFSSLLHLLTALAGDD >gi|289656334|gb|ADEA01000033.1| GENE 10 10238 - 10753 879 171 aa, chain + ## HITS:1 COG:NMA0421 KEGG:ns NR:ns ## COG: NMA0421 COG0669 # Protein_GI_number: 15793426 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantetheine adenylyltransferase # Organism: Neisseria meningitidis Z2491 # 7 166 7 166 170 250 75.0 7e-67 MNRTALRRAVYAGSFDPPTNGHLWMIREAQALFDELIVSVGVNPEKRSTFSIEERKAMLE AITREFPNVRISVFENRFLVHYAKTVDAQFIVRGIRTTADYEYERSMRYINSDLEPEIST VFLMPPREIAEVSSTMVKGLVGPVGWRSMIRRYLPEPVYQKILQDHSESAE >gi|289656334|gb|ADEA01000033.1| GENE 11 11201 - 12595 1902 464 aa, chain + ## HITS:1 COG:NMB2007 KEGG:ns NR:ns ## COG: NMB2007 COG1643 # Protein_GI_number: 15678020 # Func_class: L Replication, recombination and repair # Function: HrpA-like helicases # Organism: Neisseria meningitidis MC58 # 4 462 3 461 463 873 98.0 0 MPHPDFSQTLSKDRHFLRSAFKNPNKYGGLSKVEEKYRKSHEIFLKRLAALPKPEFDNTL PVHEKLEEIKKAIAENQVTIICGETGSGKTTQLPKICLELGRGAAGLIGHTQPRRLAARS VAERIAEELKSEIGSAVGYKVRFTDHTSRDACVKLMTDGILLAETQTDRYLAAYDTIIID EAHERSLNIDFLLGYLKQLLPRRPDLKVIITSATIDAERFSQHFNGAPVLEVSGRTYPVE ILYRPLTSKDEDDAEVELTDAIVDAADELAQHGEGDILVFLPGEREIREAAEALRKSTLR RNDEILPLFARLSHAEQHKIFHPSGAKRRIVLATNVAETSLTVPGIKYVIDTGLARVKRY SARAKVEQLHVEKISQAAARQRSGRCGRVSAGVCIRLFSEEDFNSRTEFTDPEIVRSNLA AVILRMAALKLGDVAAFPFLEMPDSRYINDGFQVLLELGAVEET >gi|289656334|gb|ADEA01000033.1| GENE 12 12674 - 14344 837 556 aa, chain + ## HITS:1 COG:HP0426 KEGG:ns NR:ns ## COG: HP0426 COG1479 # Protein_GI_number: 15645054 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Helicobacter pylori 26695 # 18 513 22 517 578 154 27.0 6e-37 MSQIKSDKWDIKKVFKQWYCIPNYQRPYVWEKDQIIDLLDDIHIACEKDKESDYFLGSLV LKETKNKDYIEYDILDGQQRLTTLFLLTAVIRDLTDNEQRQNTCHESIFQKGNPDDNIPE RLRLIFEIRHDVKEFIDEYIKQKNGTTSIKIEELAQSKSADKSVFNMANAILYMRAYLQE QIRQNAIFLDEFFPFFRNKVILIYVASQNLDDAFRMFTVLNNRGIKLRNADILKAENLSS VKEKDKQQEYAQNWEKIENYFGNEFDGFLSHLQSILTKQKASLTLLKEFENNIFAKNKLT KGNDFFDFVHKYKKHYEELFDSNENLELKNFLTLMNVGFESEIWIAPLLRYYNKFRKENL LEFTKKLNNKFVSDWISGFTPTIRIINMNNIIDMIDKLDSCDELLNQDCFAINGQEILNF LQTDIYGKRPTRYILLLLNYLYHSHEQPFNTPKVISVEHILPQNPKSDSQWVQDFDNEQR EKWTNKLGNLIILSRRKNSSQSNLDFAQKQQKYFKGNVELGRSANIMACKTWKIDDVQKN HNETLAKLKEHFGIVD >gi|289656334|gb|ADEA01000033.1| GENE 13 14409 - 15944 1280 511 aa, chain + ## HITS:1 COG:NMA0430 KEGG:ns NR:ns ## COG: NMA0430 COG1643 # Protein_GI_number: 15793435 # Func_class: L Replication, recombination and repair # Function: HrpA-like helicases # Organism: Neisseria meningitidis Z2491 # 19 408 38 427 1041 719 96.0 0 MQNTLNTSYEDLSGSLKPRYRLTKLGEQMARLPIDPKIARILLAAKKHDCMAEILVIASA LSIQDPRERPLEARDAAAKAHERFTDKQSDFLAYLNIWDSFQRERDKGLSNKQLVQWCRQ YFLSHLRMREWRELHHQLAQTAIEMGLTTKEAAFRRPPEVRQLTSSENAGNQDLSAKLKQ KQLDKKQHRAQIRAAKEAGYEQIHRALLTGLIANVGMKSPDGNDYTGARGSRFHLFPASA LFKAKPKWVMAAELVETTKLYARDVAAIQPEWIEQEAPHLVRYHYFEPHWEQKRGEVVAS ERVTLYGLTVLPRRPVSYGRIAPEEAREIFIRSALVAQECDLKAEFFVHNKKLIKEITEL EHKSRKQDVLVDDEALFAFYHERLPDFYTADAVSDGLHPTNPQQTAPSPWGRAGERAKQL PLKPTFPQPQQALSLPLSHRRGNRVPPLQRFQTTCILQIPSKPPPPPWGRAGERAKQLPL KPTFPQPQQTLSHRKGNRMQQLQQFQAACTT >gi|289656334|gb|ADEA01000033.1| GENE 14 15809 - 17572 2303 587 aa, chain + ## HITS:1 COG:NMB2011 KEGG:ns NR:ns ## COG: NMB2011 COG1643 # Protein_GI_number: 15678022 # Func_class: L Replication, recombination and repair # Function: HrpA-like helicases # Organism: Neisseria meningitidis MC58 # 1 583 549 1134 1139 948 86.0 0 MGEGWGEGKTVASQTNFSAATANPLPQEREQNAATSTVSGSLHNVGYVAQATHADSKDTD NRVREPSSHTLQNVSDDPKPKKQPAPQKNRLKPLPLADIRTFQAWLKTAERDNPRLLFLS RDDLMQHAAAHITEEQFPKHWQTADGKFKLSYRFEPHHPLDGVTLTLPLTVLNRISPAAL EWLVPGMIREKIQLQIKALPKQIRRICVPVPEFITQFLSQSPDRNAPILPQLAQAIAKTA GDIRILEQINQDEWAAFRLPEHCYFNLRIIDDGGQELAMGRDLIQIQQQLGKAAATTFRD NTQEFERDNVTTWDIGTLPESIKFARGKQQLTGYLGLQKEKDGRIALRLFDTSAAAEQAH RLGVIELMKLQLKEQIKDLNKGIQGFTQAAMLLKHINADTLRDDLTQTVCDRAFIGEDEL PRNEKTFKEQIKRARSRLPAVKEALSRYLQETAAAYAELNSKLGKHPLTHLLRLRLQTLL AAGFATRTPWAQWPRLPIYLKAMTLRLEKYSGNPARDAAREADIQELEQMWQEKTDGLVK QRQPVSDDLAAFRWMIEELRVSLFAQELKTPYPVSVKRLQKEWINKL >gi|289656334|gb|ADEA01000033.1| GENE 15 17598 - 18539 494 313 aa, chain + ## HITS:1 COG:no KEGG:Sez_1539 NR:ns ## KEGG: Sez_1539 # Name: not_defined # Def: hypothetical protein # Organism: S.equi # Pathway: not_defined # 97 305 98 303 309 137 41.0 3e-31 MFKSDEVIAEVKLHDSVYAYFVGYDIDKKYRWKDLTNVIINVLPEFAYGFHTGTNTDNSK LIAKVIDAAKSLYKIEGFLKVSQMIQKGQKGLDDEIEDKYLKRGEFGELILHLLLRDRFN TIPLISKIYFKDSIGHTVHGFDCVHIEKESKTLWLGESKLYINPMRGLSALIKDLDEHFN CKFLEDEFSLISKKVHGIGEYSDQYDELIEDRNYWINLLNSSNYKNTFTKIKIPLICTYS SNIFQKYNDEEDSSFKEEYNNEINELQEYFYKKLNHKWKDKLKIILILFPVMDKNELVKK LHEKITYLQKLND >gi|289656334|gb|ADEA01000033.1| GENE 16 20167 - 20754 106 195 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298370257|ref|ZP_06981573.1| ## NR: gi|298370257|ref|ZP_06981573.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 195 539 733 733 349 99.0 6e-95 MLNWVTYPTKEQKDFCLQLIWDFLTEKVDKQFFYNKFLNFNIPLSRYLYSKDINSLIKDD VQYWEGRESYKDYTKGQLYDYFIQHNFKLLRLYIQFKIPKWLNVLNNIQKFFAYKENLLP GNYSQYIKLFENNFIQDNIFILEEYGVPNTALYKLSKFIPENLSSEQAINLIKEKKLYES ENLLEYEKQRLINSL >gi|289656334|gb|ADEA01000033.1| GENE 17 20933 - 21862 1556 309 aa, chain - ## HITS:1 COG:PA0141 KEGG:ns NR:ns ## COG: PA0141 COG2326 # Protein_GI_number: 15595339 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Pseudomonas aeruginosa # 29 302 5 277 298 430 76.0 1e-120 MADHQLEPFENVALDGQQTKLQVFEKAVLAHEGHVSSEDSNSAPLPESYPYKQRMRRAAY EKEKQKLQIELLKVQSWVKDSGQRIVSLFEGRDAAGKGGTIKRFMEHLNPRGARVVALEK PTTTERGQWYFQRYVQNLPTAGEMVFFDRSWYNRAGVERVMGFCEPNEYLLFMRQTPELE RMLVASGIHLFKFWFSVSREEQLRRFISRRDDPLKHWKLSPVDIQSLDRWDDYTEAKNAM FFHTHTGDAPWTIIRSDDKKRARLNCIRYFLHHLDYPDKDTSAIGKVDEKIVLVPNTRYK EKTMDVGLD >gi|289656334|gb|ADEA01000033.1| GENE 18 22026 - 23921 2087 631 aa, chain + ## HITS:1 COG:NMB1970_1 KEGG:ns NR:ns ## COG: NMB1970_1 COG0147 # Protein_GI_number: 15677800 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component I # Organism: Neisseria meningitidis MC58 # 1 420 1 386 386 695 81.0 0 MPYFALFDDAVSGRAKLYQNHVESCLFHHNELDSLNDTLQKGWQKGLHSVLFADYEFGLP LMGMASKRGGNLALHWFADCADIDAESWLAQNSDDLSAGISTPQSSVSEADYLDHIRQIH EAIRRGDTYQINYTTRLHLQAYGNPVSLYRRLRQPVPYAVLSHLPDAAGKSAWTLCFSPE LFLKIGADGTISTEPMKGTAPILGDGQDERRAAELRNDPKNRAENVMIVDLLRNDLGKIA QTGKVSVPEPFKVSRFGSVWQMTSTIQAQALPHISVADILRAAFPCGSITGAPKRMSMQI IESLEAEPRGLYTGSIGYLKPCAGGLGFEGIFNVVIRTLLLKPVSNSVSDDLDSGLTNQD KATKPQTQQGGATPYRFEVNPLYQGVYGVGSGIVIDSDPAAEYRECGWKARFLNELRPAF GIFETMRVENRQCRLLDLHLGRLKTSAQALNLPLPDDGETRIRQYIAKLPDGLFRLKAEL VSDDLILSHAATAELPAPQRVIPAPQPLPRRDYLRRFKTTRRALFDQAWQTAETQGAFDS LFFNSDGLLLEGGRSNVFVKYQGQWLTPSLDLDILNGVMRQAVLQQPQTYLGTDAVIETH ITRDMLEHAEEIRLSNALRGVFRAELAHEAG >gi|289656334|gb|ADEA01000033.1| GENE 19 24094 - 25341 2101 415 aa, chain - ## HITS:1 COG:NMA0044 KEGG:ns NR:ns ## COG: NMA0044 COG0304 # Protein_GI_number: 15793076 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: 3-oxoacyl-(acyl-carrier-protein) synthase # Organism: Neisseria meningitidis Z2491 # 1 415 1 415 415 710 90.0 0 MSQRRVVITGLGQVSPVGNDVATAWSNLLAGKSGIGRITRFDASDINSQIAGEVRDFDIG QYISAKEARRMDVFIHYGIAAALQAISDAGLDELESLDKDRVGVNIGSGIGGLPSIEATG KAVIEGGARKINPFFIPGSLINLIAGHVTILKGYRGPSYGMVSACTTGAHSIGDSARLIK YGDADVMIAGGAEGAISTLGVGGFAAMKALSTRNDDPATASRPWDKGRDGFVIGEGAGVL VLEELEHAKKRGAKIYAEIVGFGMSSDAYHITAPNEEGPALAVTRALKDAGLNPEDVDYV NAHGTSTPLGDANETKALKRALGDHARKVIVNSTKSMTGHLLGAAGGVEALYSVLAVHEQ KSPPTINIFEQDIEAGCDLDYCANEARDAKINVAISNSFGFGGTNGTLVFERFKG >gi|289656334|gb|ADEA01000033.1| GENE 20 25515 - 25751 397 78 aa, chain - ## HITS:1 COG:NMA0043 KEGG:ns NR:ns ## COG: NMA0043 COG0236 # Protein_GI_number: 15793075 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl carrier protein # Organism: Neisseria meningitidis Z2491 # 1 78 1 78 78 119 97.0 2e-27 MSNIEQQVKKIVAEQLGVNEAEVKNESSFQDDLGADSLDTVELVMALEEAFGCEIPDEEA EKITTVQLAIDYINAHNG >gi|289656334|gb|ADEA01000033.1| GENE 21 26159 - 26338 233 59 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|255068067|ref|ZP_05319922.1| ## NR: gi|255068067|ref|ZP_05319922.1| HLA class II histocompatibility antigen, DO beta chain [Neisseria sicca ATCC 29256] # 1 59 3 61 61 112 100.0 1e-23 MKKLLQSELKQVAGGIGNSFEPWIHAGISYEAWLERMEYLRRTGYFIGDPRIKWPSAWD >gi|289656334|gb|ADEA01000033.1| GENE 22 26488 - 28509 2727 673 aa, chain - ## HITS:1 COG:NMB1877 KEGG:ns NR:ns ## COG: NMB1877 COG1505 # Protein_GI_number: 15677712 # Func_class: E Amino acid transport and metabolism # Function: Serine proteases of the peptidase family S9A # Organism: Neisseria meningitidis MC58 # 1 670 1 670 671 1325 95.0 0 MKSYPDSYLHFENLDAPETQNFAAEAHAETRARFLDNDKARALSDGILAQMQDTRQIPFC QEHRARMYHFHQDAEYPKGVYRVCTAATYRSGYPEWKILFSVADFDELLGDDVYLGGVSH LVEQPNRALLTLSKSGGDTAYTLEVDLEAGGLVEGGFHFPAGKNHVSWRDENSVWVCPAW DERQLTESGYPREVWLVERGKSFEESLPVYQIGEDGMMVNAWRYLDPQGSPIDLIEASDG FYTKTYLQVSSEGEAKPLNLPADCDVVGYLAGHLLLTLRKDWNRANQSYPSGALVAVKLN RGELGAAQLLFAPDETQALESVETTKRFVVASLLENVQGRLKAWRFTDGKWQEAELPRLP SGALEMTDQPWGGDVVYLAASDFTTPLTLFALDLNVMELTVMRRQPQQFVSDGIEVRQFW AVSSDGERIPYFHVGKNAAPDTPTLVYAYGGFGVPELPHYLGSIGKYWLEEGNAFVLANI RGGGEFGPRWHQAAQGISKHKSVDDLLAVVRDLSKRGMSSPEHIGLQGGSNGGLITAAAF VREPQSIGALVCEVPLTDMIRYPLLSAGASWTDEYGNPQKYEVCKRWLGELSPYHNLSDD INYPPALITTSLSDDRVHPAHALKFYAKLRETSAQSWLYAPDGGGHTGNGTQRESADELA CVLLFLKEFLSER >gi|289656334|gb|ADEA01000033.1| GENE 23 28904 - 30880 1233 658 aa, chain - ## HITS:1 COG:PM2006 KEGG:ns NR:ns ## COG: PM2006 COG0457 # Protein_GI_number: 15603871 # Func_class: R General function prediction only # Function: FOG: TPR repeat # Organism: Pasteurella multocida # 204 617 365 756 788 88 26.0 4e-17 MDVTDLIGEGFKLFNEKKYAEAIEKLHQAWDRIIDKSTQIAEQIRIQYVLGCCYYKQAIK TKDENEADKLFDKAVKHYQEWLQFKQENIQDQINVQSWIVYCYYTQLERTKNIGRANELF IKAIKHNKERWKLADQLDEKKRICEKNRALSLFVGCHFQQAMKTNDTDNASKMFKKAAAF SRLQLWLSGKLENEKNRIEKQIFAQFVLCCCYIERVKKIKTTFETEKFAKYQASKYFSAA YAQLSQLSDEAEKKEWKKTIRQGLREIDYLNKDWHSYFEKKKQEIQESLFKVETSQPQDA VATILAVLHITPIELGFTPMAHYTSPHVCHILFGIGGNETASPMRLGSSTYMNDPSEGKA LLDLLNQQDLELENKADGASHNAFFTCFSSRVNDLNQFRLYGKEGGVEASGCCLVFNKNG DWLRETDVSASFHNPSQKSGQDSDDPLEAGISDNGYEKLPLYQVAYVAYKDEYIADKKCG IWLSAPNKAFNLYQNLAKENLGSSIRFTLDANISRFGIRLNPLGNEEWHQFRLEKLKEAL EELIRFFGDKSAVSDDDKEALEYIRYLFKDFAFRDEEEFRLLVIKPIDSEEIEYCETTQS VYIPYTDIRNRADEVILGTNYEKTGNQRKAEVFRYQMKQKCPDVKVSRSTLPINPPNK >gi|289656334|gb|ADEA01000033.1| GENE 24 31250 - 32032 1419 260 aa, chain - ## HITS:1 COG:NMB0275 KEGG:ns NR:ns ## COG: NMB0275 COG0134 # Protein_GI_number: 15676199 # Func_class: E Amino acid transport and metabolism # Function: Indole-3-glycerol phosphate synthase # Organism: Neisseria meningitidis MC58 # 1 260 1 260 260 402 82.0 1e-112 MTDILNKILATKAEEVAAQKAAVSAEEIKRQAQAAAPVRDFIGAIRAKHAQGLPAVIAEI KKASPSKGLIRADFRPAAIAAAYENAGAACLSVLTDEPYFQGSPEYLKQVKAAVGLPVLR KDFIIDEYQVYQARAWGADAILLIAAALDAERLERFEQTAHSLNMTVLLELHERGELEKC RNLTTPLWGVNNRNLRTFEVSLQQTLDLLPDLAGKTVVTESGIRNKDDVGYMRARGVHTF LIGETFMRADDIEAEVRKLF >gi|289656334|gb|ADEA01000033.1| GENE 25 32110 - 32448 260 112 aa, chain - ## HITS:1 COG:NMB0276 KEGG:ns NR:ns ## COG: NMB0276 COG0429 # Protein_GI_number: 15676200 # Func_class: R General function prediction only # Function: Predicted hydrolase of the alpha/beta-hydrolase fold # Organism: Neisseria meningitidis MC58 # 4 106 210 312 318 169 74.0 8e-43 MKNCKTLGGFDDLFTAPLHGFTDRHDYYRRASCKPLLRSVRTPLLLLNAVSDPFLPPEAL PTAAEVSDAVTLLQPPYGGHVGFVNKSGGRLNIEWMPETVLHYFETHGREAV Prediction of potential genes in microbial genomes Time: Thu May 26 13:48:28 2011 Seq name: gi|289656333|gb|ADEA01000034.1| Neisseria sp. oral taxon 014 str. F0314 cont1.34, whole genome shotgun sequence Length of sequence - 73004 bp Number of predicted genes - 69, with homology - 64 Number of transcription units - 41, operones - 17 average op.length - 2.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 451 604 ## COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold - Prom 563 - 622 5.6 + Prom 607 - 666 7.4 2 2 Tu 1 . + CDS 825 - 917 139 ## + Term 968 - 1001 1.9 - Term 927 - 974 12.3 3 3 Op 1 . - CDS 1000 - 1590 416 ## COG1714 Predicted membrane protein/domain 4 3 Op 2 . - CDS 1700 - 3241 970 ## PROTEIN SUPPORTED gi|145628098|ref|ZP_01783899.1| 30S ribosomal protein S20 - Prom 3325 - 3384 3.6 5 4 Tu 1 . - CDS 3399 - 4352 1092 ## COG1052 Lactate dehydrogenase and related dehydrogenases - Prom 4403 - 4462 4.4 - Term 4423 - 4474 10.5 6 5 Tu 1 . - CDS 4504 - 4686 297 ## gi|298370273|ref|ZP_06981589.1| conserved hypothetical protein - Prom 4713 - 4772 3.5 - Term 4741 - 4781 -0.9 7 6 Tu 1 . - CDS 4803 - 6524 3222 ## COG2268 Uncharacterized protein conserved in bacteria - Prom 6692 - 6751 2.8 - Term 6671 - 6706 -0.8 8 7 Op 1 . - CDS 6792 - 7964 1089 ## gi|298370275|ref|ZP_06981591.1| magnesium protoporphyrin IX chelatase subunit H 9 7 Op 2 . - CDS 7985 - 9400 1135 ## gi|298370276|ref|ZP_06981592.1| glycine-rich cell wall structural protein 1.8 (GRP 1.8) 10 8 Tu 1 . + CDS 9375 - 9539 132 ## 11 9 Tu 1 . - CDS 9584 - 10249 1089 ## Pnap_3021 hypothetical protein - Prom 10275 - 10334 2.1 - Term 10296 - 10344 -0.8 12 10 Tu 1 . - CDS 10350 - 10832 626 ## COG1764 Predicted redox protein, regulator of disulfide bond formation 13 11 Tu 1 . - CDS 10901 - 11128 371 ## gi|298370279|ref|ZP_06981595.1| conserved hypothetical protein 14 12 Op 1 . + CDS 11261 - 11605 473 ## NMC1683 hypothetical protein 15 12 Op 2 . + CDS 11654 - 12043 663 ## NMCC_1675 hypothetical protein + Term 12088 - 12148 5.5 16 13 Tu 1 . - CDS 12137 - 12331 187 ## - Prom 12527 - 12586 3.9 17 14 Op 1 . - CDS 12593 - 13255 1043 ## Mchl_0680 phage shock protein A, PspA 18 14 Op 2 . - CDS 13311 - 13811 562 ## gi|298370284|ref|ZP_06981600.1| conserved hypothetical protein - Prom 13911 - 13970 7.2 + Prom 13870 - 13929 7.4 19 15 Op 1 . + CDS 14159 - 16054 2945 ## COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division + Term 16086 - 16134 10.4 20 15 Op 2 . + CDS 16147 - 16317 199 ## gi|298370286|ref|ZP_06981602.1| hypothetical protein HMPREF9016_01623 + Prom 16348 - 16407 2.6 21 16 Tu 1 . + CDS 16567 - 17331 183 ## PROTEIN SUPPORTED gi|163797523|ref|ZP_02191474.1| 50S ribosomal protein L9 + Prom 17385 - 17444 1.8 22 17 Op 1 . + CDS 17506 - 18219 937 ## COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division + Term 18252 - 18299 1.1 + Prom 18323 - 18382 3.6 23 17 Op 2 . + CDS 18402 - 19952 609 ## COG4928 Predicted P-loop ATPase + Term 19955 - 20006 19.2 - Term 19943 - 19994 19.2 24 18 Tu 1 . - CDS 19996 - 20484 692 ## NGO1792 hypothetical protein - Prom 20511 - 20570 4.3 25 19 Op 1 15/0.000 + CDS 21464 - 22087 998 ## COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division + Term 22093 - 22129 8.9 + Prom 22098 - 22157 4.8 26 19 Op 2 . + CDS 22186 - 22962 1485 ## COG1192 ATPases involved in chromosome partitioning + Term 23022 - 23076 17.0 - Term 22959 - 23007 1.8 27 20 Tu 1 . - CDS 23075 - 23641 817 ## COG0164 Ribonuclease HII 28 21 Tu 1 11/0.000 - CDS 24194 - 25342 1567 ## COG0763 Lipid A disaccharide synthetase - Prom 25366 - 25425 5.5 - Term 25406 - 25446 9.8 29 22 Op 1 25/0.000 - CDS 25474 - 26250 1212 ## COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase 30 22 Op 2 18/0.000 - CDS 26364 - 26828 869 ## COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 31 22 Op 3 15/0.000 - CDS 26859 - 27911 1485 ## COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 32 22 Op 4 17/0.000 - CDS 28045 - 28563 885 ## COG2825 Outer membrane protein - Prom 28648 - 28707 1.6 - Term 28644 - 28700 5.1 33 22 Op 5 18/0.000 - CDS 28717 - 31116 3762 ## COG4775 Outer membrane protein/protective antigen OMA87 34 22 Op 6 17/0.000 - CDS 31121 - 32461 1466 ## COG0750 Predicted membrane-associated Zn-dependent proteases 1 35 22 Op 7 . - CDS 32530 - 33714 1154 ## COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase 36 23 Op 1 . - CDS 33818 - 34567 1015 ## COG2859 Uncharacterized protein conserved in bacteria 37 23 Op 2 32/0.000 - CDS 34612 - 35406 1125 ## COG0575 CDP-diglyceride synthetase 38 23 Op 3 19/0.000 - CDS 35410 - 36156 945 ## COG0020 Undecaprenyl pyrophosphate synthase 39 23 Op 4 . - CDS 36216 - 36773 673 ## COG0233 Ribosome recycling factor - Prom 36860 - 36919 4.4 + Prom 37091 - 37150 6.8 40 24 Tu 1 . + CDS 37244 - 39634 4046 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit + Prom 40193 - 40252 4.7 41 25 Op 1 . + CDS 40353 - 41090 1036 ## PAU_01244 hypothetical protein + Term 41115 - 41145 1.0 42 25 Op 2 . + CDS 41200 - 42639 2293 ## plu3514 hypothetical protein + Term 42669 - 42708 9.1 + Prom 42758 - 42817 7.1 43 26 Tu 1 . + CDS 42953 - 45124 2066 ## COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid - Term 45144 - 45209 5.3 44 27 Op 1 13/0.000 - CDS 45231 - 45641 422 ## COG2969 Stringent starvation protein B 45 27 Op 2 4/0.125 - CDS 45661 - 46272 367 ## PROTEIN SUPPORTED gi|46133488|ref|ZP_00157281.2| COG0625: Glutathione S-transferase - Prom 46322 - 46381 5.6 - Term 46445 - 46491 9.5 46 28 Op 1 16/0.000 - CDS 46506 - 47309 833 ## COG2857 Cytochrome c1 47 28 Op 2 28/0.000 - CDS 47309 - 48658 1790 ## COG1290 Cytochrome b subunit of the bc complex 48 28 Op 3 2/0.375 - CDS 48677 - 49258 630 ## COG0723 Rieske Fe-S protein - Prom 49301 - 49360 5.5 49 29 Tu 1 . - CDS 49383 - 50132 747 ## COG0327 Uncharacterized conserved protein - Prom 50266 - 50325 4.3 + Prom 50230 - 50289 5.0 50 30 Tu 1 . + CDS 50314 - 51246 1606 ## COG0583 Transcriptional regulator + Term 51266 - 51316 15.2 + Prom 51341 - 51400 3.8 51 31 Tu 1 . + CDS 51494 - 52948 2159 ## COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) + Term 52984 - 53031 14.1 - Term 52972 - 53019 12.5 52 32 Tu 1 . - CDS 53038 - 53721 1267 ## COG0588 Phosphoglycerate mutase 1 - Prom 53748 - 53807 4.6 + Prom 53809 - 53868 3.1 53 33 Tu 1 . + CDS 53891 - 54199 410 ## COG3691 Uncharacterized protein conserved in bacteria + Term 54210 - 54251 12.0 + Prom 54244 - 54303 4.7 54 34 Tu 1 . + CDS 54336 - 56297 2679 ## COG1305 Transglutaminase-like enzymes, putative cysteine proteases - Term 56192 - 56237 0.4 55 35 Tu 1 . - CDS 56358 - 56687 141 ## - Prom 56914 - 56973 4.2 + Prom 56659 - 56718 5.3 56 36 Op 1 . + CDS 56959 - 59268 3160 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 57 36 Op 2 . + CDS 59293 - 59394 70 ## 58 36 Op 3 13/0.000 + CDS 59416 - 60999 2270 ## COG0642 Signal transduction histidine kinase 59 36 Op 4 . + CDS 60992 - 62617 2207 ## COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains + Term 62750 - 62803 20.2 - Term 62727 - 62799 27.1 60 37 Op 1 . - CDS 62833 - 63573 278 ## COG2360 Leu/Phe-tRNA-protein transferase - Prom 63608 - 63667 1.8 - Term 63635 - 63685 12.2 61 37 Op 2 . - CDS 63706 - 64143 640 ## COG0735 Fe2+/Zn2+ uptake regulation proteins - Prom 64198 - 64257 3.2 + Prom 64129 - 64188 6.1 62 38 Op 1 3/0.125 + CDS 64361 - 64762 593 ## COG2913 Small protein A (tmRNA-binding) 63 38 Op 2 . + CDS 64783 - 65589 1386 ## COG0289 Dihydrodipicolinate reductase + Term 65625 - 65672 13.3 + Prom 65644 - 65703 3.4 64 39 Tu 1 . + CDS 65727 - 67001 1927 ## COG0477 Permeases of the major facilitator superfamily + Prom 67087 - 67146 3.5 65 40 Op 1 . + CDS 67170 - 68261 1892 ## COG0012 Predicted GTPase, probable translation factor + Term 68277 - 68330 3.7 66 40 Op 2 . + CDS 68350 - 69168 483 ## gi|298370330|ref|ZP_06981646.1| hypothetical protein HMPREF9016_01667 67 40 Op 3 . + CDS 69244 - 70542 820 ## PROTEIN SUPPORTED gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 + Term 70556 - 70596 11.5 68 41 Op 1 . + CDS 70649 - 72922 210 ## PROTEIN SUPPORTED gi|22537308|ref|NP_688159.1| 30S ribosomal protein S1 69 41 Op 2 . + CDS 70649 - 72922 317 ## PROTEIN SUPPORTED gi|87310993|ref|ZP_01093118.1| ribosomal protein S1-like RNA-binding domain protein Predicted protein(s) >gi|289656333|gb|ADEA01000034.1| GENE 1 1 - 451 604 150 aa, chain - ## HITS:1 COG:NMB0276 KEGG:ns NR:ns ## COG: NMB0276 COG0429 # Protein_GI_number: 15676200 # Func_class: R General function prediction only # Function: Predicted hydrolase of the alpha/beta-hydrolase fold # Organism: Neisseria meningitidis MC58 # 1 150 1 150 318 233 76.0 1e-61 MNINLPDTPFWLHNGNAETIFAKLLQSAPPAYRRELLPDSTGKTQIAYDFVDAARPDAPL VVLFHGLEGGSMSHYAVEMMKAVQRRGWHGVVAHFRGCGGIANTAPVFYHSGDTREIGFM LETLAARYPRIYAAGVSLGGNALAKYLGEE >gi|289656333|gb|ADEA01000034.1| GENE 2 825 - 917 139 30 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSVFFFNIILFIGISSLVSLAALWWYEHDL >gi|289656333|gb|ADEA01000034.1| GENE 3 1000 - 1590 416 196 aa, chain - ## HITS:1 COG:NMB2078 KEGG:ns NR:ns ## COG: NMB2078 COG1714 # Protein_GI_number: 15677899 # Func_class: S Function unknown # Function: Predicted membrane protein/domain # Organism: Neisseria meningitidis MC58 # 32 191 30 190 193 73 32.0 2e-13 MSENHLIETDGNGAVQTPAVPENLVYAPLWRRLTAFVLNTVFNVLVFAPSLLGIAEIRDK YSAYLLENHQSSGWVRGPDEGSVLLIVVFAYIVAQLYSMGWDGQSLGKRIMGIVVVKSDG SPADFWDVVMMREFFWPLKALIMITAAGMVFGEGGQGLAGFLFVWLNAKRMIFTEGGRTM PDEFADTVVVRKVRAE >gi|289656333|gb|ADEA01000034.1| GENE 4 1700 - 3241 970 513 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145628098|ref|ZP_01783899.1| 30S ribosomal protein S20 [Haemophilus influenzae 22.1-21] # 3 506 5 519 524 378 39 1e-104 MNLLGALAKLGSLTMVSRILGFVRDMIIARVFGAGDATDAFLTAFKLPNLLRRIFAEGAF SQAFVPVLAEYRQTKSPEATREFVQYVAGMLTFALTVVTAVGVLAAPWIIRATATGFGKN PDKLALAADLLRIMFPYILLISLSSFVGSILNTYHKFQIPAFTPVLLNISFIVAALFFVP YFDPPITALAWAVFIGGVLQLVFQLPWLAKQGFLKLPKLDFRNSAVNRVIKLMIPSIFAA SVAQVSLVISTIFASYLQSGSITWMYYADRMTELPTGVLGVALGTILLPTLSKHAGGRNP EEFSKLLDWGLRLCFLLAAPAALALAVLSLPLISTLFMSKGFTYHDAVMTRNALAACSFC VVGQITVKVLAPAFYAQQNIRTPVKIAVFTLVVTQLMNLAFVGPLKHVGLSLSVGLGACL NAGLLFTLLRKHGIYLPGEGWRPFSVKLLAALAVMGGGLLAAQYWLPMDWQHAGGLRKAG QLFVLIFIGGGLYFASLAALGFRPHHFKRSETK >gi|289656333|gb|ADEA01000034.1| GENE 5 3399 - 4352 1092 317 aa, chain - ## HITS:1 COG:NMA0274 KEGG:ns NR:ns ## COG: NMA0274 COG1052 # Protein_GI_number: 15793292 # Func_class: C Energy production and conversion; H Coenzyme transport and metabolism; R General function prediction only # Function: Lactate dehydrogenase and related dehydrogenases # Organism: Neisseria meningitidis Z2491 # 5 317 10 322 322 460 75.0 1e-129 MKIWKIAVLDRATLAPEPFAFDFPAEVAEYPSTRPEETAARIAGADVVVTNKVVITAEHI AANPQLRLIAVAATGVNNVDTAAAKAAGVTVCNIRAYGNESVAEHAFMLMIALMRNLPAY QRDIAAGIWEQSPFFCHFGAPMRDLHGKTLAVFGRGNIGKTLAGYARAFGMNVVFGEHKH AENVREGYVSFDEAIQTADAVSLHCPLTPQTANMIGETELQRMKPGAVLINCGRGGLVDE QALVAALKYGRIGGAGFDVLTEEPPRNGNPLLKARLPNLIVTPHMAWGSEEARNRLFAIL LENINRFAAGRPQNVVV >gi|289656333|gb|ADEA01000034.1| GENE 6 4504 - 4686 297 60 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298370273|ref|ZP_06981589.1| ## NR: gi|298370273|ref|ZP_06981589.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 60 1 60 60 118 100.0 1e-25 MRKVSALFLAVAMAASVNVQAASFWDWLNGWGETPKRGMVKTVCESDFGDPRGNYCFDTK >gi|289656333|gb|ADEA01000034.1| GENE 7 4803 - 6524 3222 573 aa, chain - ## HITS:1 COG:ECs3933 KEGG:ns NR:ns ## COG: ECs3933 COG2268 # Protein_GI_number: 15833187 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 10 563 15 542 553 397 49.0 1e-110 MNLVSIGIIAGVILVALFVLGLILTRLYRRASKEVSFVRTGFGGEKVIMNGGAMVLPVLH EIIPVNMNTLRLEVRRAAQQALITRDRMRVDVMAEFYVRVKPSAESIATAAQTLGMKTMS PDELKDLVEGKFVDALRAVAAEMAMEELHEKRVDFVQKVQQVVSEDLFKNGLELETVSLT GLDQTSFEFFNPQNAFDAEGLTKLTETIEGRRKKRNEIEQDTDLAIKTKNLEAEQQRLKI SREEEYAKLEQEREIAVRRAEQEASIAEQEAQKKREAEEAKIAAEREVDLKRIAAERDIK NEDIRKAQAVEQAEVERRKAIELAEQDRAIAVAEKSRAESEAKAEADKARAAAVREEESV ITVRETERAERAKAVELIAAEEAAQKDAISLTVAAEAEKQAAQDRAEAVRIAAEAEAEKQ RLQAKGEADAKVLLAQAQEQQYKVDAEGTRAVNEAANVLSVEQVEMQVRLALLKHLPDII RESVRPMENIDDIKILQVNGLGGFSGAANGSEGVSDGQTTQASLADQIVNSALRYRSQAP LVDGLLKELGLNGGDINGLTQGLDKGIGKDAAE >gi|289656333|gb|ADEA01000034.1| GENE 8 6792 - 7964 1089 390 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298370275|ref|ZP_06981591.1| ## NR: gi|298370275|ref|ZP_06981591.1| magnesium protoporphyrin IX chelatase subunit H [Neisseria sp. oral taxon 014 str. F0314] # 1 390 1 390 390 679 100.0 0 MGKQRKKSRYRQNRNRQRSDSVSWAGLGRQPQAGVRREGRRTVFATSFWGTLFMPLVTGL LLVFIALLVFLAVSGFLPTVHDWAAKAAAGVFLLYGLKRSEGWWFGLTCRRFASIGGGEL VLYGAFGRTRFRCPTDWRFDYLCSVRCRIFSFRTISPDGHSRRFSISLCRNTAALIAELG AVDRGREMSVAMQNGFMELFDNLDKRKRRGWRILIGLVSATVLLACVRQIFGNMLLSPLA WQAAAALTAAWLLPLAWMSRKVLVGETVFGLPSNHYLRQTAIGRIRFFLTTGGKAALFWL AIGALCVWSLASLSGAASLWGKPFERVAVEMTVEGSCGRYSRPRKLAVRLPESHRDFDGS WCEGSFETPDGETVYVRRSLFARELRFSRP >gi|289656333|gb|ADEA01000034.1| GENE 9 7985 - 9400 1135 471 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298370276|ref|ZP_06981592.1| ## NR: gi|298370276|ref|ZP_06981592.1| glycine-rich cell wall structural protein 1.8 (GRP 1.8) [Neisseria sp. oral taxon 014 str. F0314] # 1 471 17 487 487 800 100.0 0 MQQNKSKIMMLYPGSFGDVVLEGVLVGVVLALFVFLVAGILFSTLSMNWLLVLLGLLVTL IFVGMGWLIAVPVWRKYTMNDLLRLDTARGLLLHGRWRWGWQAQRKYPLSMFAAVAAEKV RDDYRDYYGRLWLVSADGQNDLVLEANFLPHKGSLHKLDGIQNYIAQATGLAKRPVINTV IRAEAETAANPTLLQPLQVKVMPVWRQAVNLAAAGLWAWLVLWLVRKAVVGRAGEIPRLL QGFMVLLALGLLAVAVSEVRAVFRARSSRKTPQTVWWQPSEIKAALAAARQAEHEPQPKL PERAAPKLLDGAEFAVYSLGTLLSRIPFLLFTLLMVWSGGGFGWRLFWLAALLFAAWRLA YHWHTLRKVRYSVQEDVLTVYRLYGFKWLPEKRYALSGFCGIYSRVKYSGLGVGLNEIRL AGKEGGKDVRLLEADLLLRDNRQTAEKTAKQISLATGLPLLEYIEPSEKAV >gi|289656333|gb|ADEA01000034.1| GENE 10 9375 - 9539 132 54 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MILLLFCCMIFSFRQNRAISSHTSNAAVRTPIAGTPVVSYRLEGSVLSGKFGMV >gi|289656333|gb|ADEA01000034.1| GENE 11 9584 - 10249 1089 221 aa, chain - ## HITS:1 COG:no KEGG:Pnap_3021 NR:ns ## KEGG: Pnap_3021 # Name: not_defined # Def: hypothetical protein # Organism: P.naphthalenivorans # Pathway: not_defined # 4 220 3 206 206 133 40.0 5e-30 MWNLINAPETEIFGIAIALMVLLGVLEVISMLAGGISDWLDNLLPDSLTETAHAEVGLDA ADAGVFVRFLSWLYVGRVPVLMLMVVFLAVYGLTGYLFQTIFAAVFGSYLNGWLAAVAVW FLSLPLVRLTAGGLYKIMPKDETTAVSQESLIGRIGTVVLGEARAGSAAQVRVKDVYGQQ HYVMAEPDSDEVLKQGDAVLLVSLEGNTFKAILNPSGSLVD >gi|289656333|gb|ADEA01000034.1| GENE 12 10350 - 10832 626 160 aa, chain - ## HITS:1 COG:AGc1844 KEGG:ns NR:ns ## COG: AGc1844 COG1764 # Protein_GI_number: 15888346 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 3 155 24 174 176 172 54.0 2e-43 MSKKHTYRTATTWTGNLGEGTSSYTAYLRNFTVSAEGKPDLHGSADPAFRGDANRWNPEE MLLAAVSACHKLWYLHLCADAGICVTAYTDHAEAVMDEGGNGSAGRFVSAVLKPRVTIAA GNDRAKALELHHEAHRLCFIANSVNFPIECRAEIESGEAV >gi|289656333|gb|ADEA01000034.1| GENE 13 10901 - 11128 371 75 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298370279|ref|ZP_06981595.1| ## NR: gi|298370279|ref|ZP_06981595.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 75 16 90 90 128 100.0 1e-28 MIFAVLIALITAAVLYVLLFEDWDEFLECVKFCFTPEIISALRGKYWEDVWAETKILLWL GISVTAGVSAYIWLG >gi|289656333|gb|ADEA01000034.1| GENE 14 11261 - 11605 473 114 aa, chain + ## HITS:1 COG:no KEGG:NMC1683 NR:ns ## KEGG: NMC1683 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 16 113 1 93 94 88 50.0 6e-17 MKYPQSQYIEPFKPLLKKLLLPAAVICAIFLAAEGFDLYEDYAQYRMETDPAFAQHHNRA VSILQGRGYEVHDSDTDLHWARPVLEFEAYKGSLEYKIVMTYPDLNIIEERVDL >gi|289656333|gb|ADEA01000034.1| GENE 15 11654 - 12043 663 129 aa, chain + ## HITS:1 COG:no KEGG:NMCC_1675 NR:ns ## KEGG: NMCC_1675 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_053442 # Pathway: not_defined # 53 128 41 116 117 95 56.0 7e-19 MKKLLPALLLSSIALAACAAPYPDDYYDDYYYDRYERDYDRYDDYRYRDGKYYDDDYIEH QIYSDPSFEQKRAQVMQILERRGYRVHEIEADDRRGRPVLKAEAFRNGREYDIVFSWPDL RIISERIDY >gi|289656333|gb|ADEA01000034.1| GENE 16 12137 - 12331 187 64 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLKAEIFEGCEESDRQKLLDLLEEKCYSRIKFKNFLKHRPFLIAYVFWAWMFYENLIAFL RYIK >gi|289656333|gb|ADEA01000034.1| GENE 17 12593 - 13255 1043 220 aa, chain - ## HITS:1 COG:no KEGG:Mchl_0680 NR:ns ## KEGG: Mchl_0680 # Name: not_defined # Def: phage shock protein A, PspA # Organism: M.chloromethanicum # Pathway: not_defined # 1 220 165 377 379 92 30.0 1e-17 MSETLSRRVGRLVSGGFHALIDAAENLAPEAAMNESIREIERAVDEVRAELGKVLAQKHL AAKKMADESNRHEAIDANLQAAVAAGRDDLAEAGIAEQMDIEARLPVLENTIADCAAQEK ELEGFIAALQAKKREMQQQLQDWRAAQQNAGAGKAAGGSDLNRIARDAEKSGNAFDRVMG RQNAVHSSTNAAQLAKLKELEDLSRNNRIAERLAALKAGK >gi|289656333|gb|ADEA01000034.1| GENE 18 13311 - 13811 562 166 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298370284|ref|ZP_06981600.1| ## NR: gi|298370284|ref|ZP_06981600.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 166 1 166 166 290 100.0 3e-77 MNATNRIPVSVRITQEDADFIAELKIEGANTPSEKIRELLKQARLAHTQTRDYGSALTAQ EQFFQAAKHDVLHAEKQAGVHSHIVARLFEQLPDLGATLAADLPEEADLDSLKKYERELM WRIVRLTDSILQLAVTGKGAAYDDTVLQQLENTLKLAKIVQQSGEV >gi|289656333|gb|ADEA01000034.1| GENE 19 14159 - 16054 2945 631 aa, chain + ## HITS:1 COG:NMB0193 KEGG:ns NR:ns ## COG: NMB0193 COG0445 # Protein_GI_number: 15676120 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: NAD/FAD-utilizing enzyme apparently involved in cell division # Organism: Neisseria meningitidis MC58 # 1 631 1 631 631 1176 96.0 0 MTHMIYPKTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKG HLVRELDALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKAAIREMLENQEN LDLFQQSVDDVTLDGDRISGVITAMGVEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGD PAAKSLGGRLRELNLPQGRLKTGTPPRIDGRTIDFSQLTEQPGDTPVPVFSVRGNAEMHP RQVSCWITHTNLKTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFAAKDSHQIFL EPEGLTTNEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASL ETKTVQGLFFAGQINGTTGYEEAAAQGLLAGANAVQYVREQDPLLLRREQAYLGVLVDDL ITKGVNEPYRMFTSRAEYRLQLREDNADMRLTEDGHKIGLVGEEQWRMFNEKREAIEREI QRLKTTWYTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGARSSENLSA EVIEQVEIQVKYQGYIDRQNEEIDSRRDIETLKLPDDIDYSKVKGLSAEVQQKLNQHKPE TVGQASRISGVTPAAVALLMVHLKRGFKGAK >gi|289656333|gb|ADEA01000034.1| GENE 20 16147 - 16317 199 56 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298370286|ref|ZP_06981602.1| ## NR: gi|298370286|ref|ZP_06981602.1| hypothetical protein HMPREF9016_01623 [Neisseria sp. oral taxon 014 str. F0314] # 1 56 1 56 56 104 100.0 2e-21 MIKPRHTYAVIPAQRRSIVGRILESDILDDSVGYKYPTYGLLSKEAQAVYDEGLKL >gi|289656333|gb|ADEA01000034.1| GENE 21 16567 - 17331 183 254 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163797523|ref|ZP_02191474.1| 50S ribosomal protein L9 [alpha proteobacterium BAL199] # 2 245 1 251 259 75 27 1e-12 MIPTQHTVLITGGATGIGFALAKKFHAAGNRVILVGRREDALRQAVEQLSGEQLSGSLHD NGARCGYAVADVSQAEDRARLAAQFPETSILINNAGIQFTKRLDEQTDDEIAQEIAVNLT APVQLTRAFLPMLAGKPQAAVINVSSGLAVVPKETCAVYCATKAALHSFSQVLRWQLENS GIRVFEILPPMVATPMSKGKGHAHLKISPDELADEFWRDFERNRFESMIGKTKWLYWINR LSARLGQRIMRKGL >gi|289656333|gb|ADEA01000034.1| GENE 22 17506 - 18219 937 237 aa, chain + ## HITS:1 COG:NMB0193 KEGG:ns NR:ns ## COG: NMB0193 COG0445 # Protein_GI_number: 15676120 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: NAD/FAD-utilizing enzyme apparently involved in cell division # Organism: Neisseria meningitidis MC58 # 1 237 395 631 631 443 95.0 1e-124 MQYIRGQNPLLLRREQAYLGVLVDDLITKGVNEPYRMFTSRAEYRLQLREDNADMRLTED GHKIGLVSEEQWRMFNEKREAIEREIQRLKTTWYTPQKLAEDEQIRVFGQKLSREANLHD LLRRPNLDYAALMTLEGARPSENLSAEVIEQVEIQVKYQGYIDRQNEEIDSRRDIETLKL PDDIDYSKVKGLSAEVQQKLNQHKPETVGQASRISGVTPAAVALLMVHLKRGFKGAK >gi|289656333|gb|ADEA01000034.1| GENE 23 18402 - 19952 609 516 aa, chain + ## HITS:1 COG:STM2238 KEGG:ns NR:ns ## COG: STM2238 COG4928 # Protein_GI_number: 16765566 # Func_class: R General function prediction only # Function: Predicted P-loop ATPase # Organism: Salmonella typhimurium LT2 # 34 466 2 400 443 265 36.0 1e-70 MAKVWIPACAGMTMRVFLLKFMIKQRDDMETQTLENPTFDTQDEFKRKPIAENIIRLLTS DIDLSPMVIDGGWGTGKTEFCQKLIRLMQQQHPDYQPVYIDAFRSDHSGEPLLALLAEII KACTPEDTGEQPSEQRKNITKKVAKAAGFVMKTVAKAAVGHVLKQNMEDLAEGMSQIIND EQEAKNAAATVAGAATILASHSIDATIDATVEALLKEQIEAEKNLETLKACLKELAAEKP IILFIDELDRCRPDYAVDMLEVIKHVFDVENVKVVLVTNTKQLRAAINHRYGVEVDAQKY LDKFLKYSFALPDKIVARFEEERTLVSVEYFKQLIRNSRMASELQGLIGQRIILNFISDM IERNNISLRETERLVRFLEIYHSLSHGLGNVIWQYALLRITGVFIFCFHPNLIGDINKNR TEAKDFARLFNIQSLPDTPKNSYLFNRVDIIAVMLIMYSKIEDKRFIFQEFYGSDLDDQI NEDFLQNPEIYPQGIDGVFSILKDTFRVLSLEQTPQ >gi|289656333|gb|ADEA01000034.1| GENE 24 19996 - 20484 692 162 aa, chain - ## HITS:1 COG:no KEGG:NGO1792 NR:ns ## KEGG: NGO1792 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae # Pathway: not_defined # 1 161 33 191 191 135 50.0 3e-31 MYIQEKPYIPFAAAMIFAALPLALLMHELAALLFGARGLLLAEQGGHYALAGYWRDSTVW FVCGVFGFLNIPLSAGLAKIAHRKMMRRRWRYALFLAGIGACASAFAAFIIETVVGSGAL GGMRGTGVFYYTLSVFVLAMCFLPKQLTRAPVQTVVFYKPKK >gi|289656333|gb|ADEA01000034.1| GENE 25 21464 - 22087 998 207 aa, chain + ## HITS:1 COG:NMA0077 KEGG:ns NR:ns ## COG: NMA0077 COG0357 # Protein_GI_number: 15793106 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division # Organism: Neisseria meningitidis Z2491 # 1 207 1 207 207 318 74.0 5e-87 MDNRQKLQSGLKEMGLDLSGGQQDKLLAYVEMLKKWNKTYNLTALRDESQIISHHLLDSL TLPPYLEGAQTMLDVGSGGGQPGIPAAVCRPDLQITLLDANTKKTSFLQQAAIELELKNV RVVSGRVEAVQGLRADVITSRAFAELADFVNWTAHLLQNGGCWAAMKGVYPAAEIDRLPD SVCVERVDKIRVPQLNAERHMVILRKK >gi|289656333|gb|ADEA01000034.1| GENE 26 22186 - 22962 1485 258 aa, chain + ## HITS:1 COG:NMA0076 KEGG:ns NR:ns ## COG: NMA0076 COG1192 # Protein_GI_number: 15793105 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Neisseria meningitidis Z2491 # 1 255 1 255 257 398 81.0 1e-111 MSANIIAVANQKGGVGKTTTTVNLAASLASRNKRVLVIDLDPQGNATTGSGIDKASIGCG VYQVVLGEAEIKDAVIRSNSGRFDVLAANRALAGAEVELVQEIAREVRLKNALKAVENDY DFILIDCPPSLTLLTLNGLVAANGVVVPMLCEYYALEGISDLIATVRKIRQAINPNLEVL GIVRTMYDARSRLVAEVSDQLQQHFGGLLFDTTIPRNIRLAEAPSHGMPALAYDASAKGA RAYLELADELLGRLNRPA >gi|289656333|gb|ADEA01000034.1| GENE 27 23075 - 23641 817 188 aa, chain - ## HITS:1 COG:NMB0192 KEGG:ns NR:ns ## COG: NMB0192 COG0164 # Protein_GI_number: 15676119 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HII # Organism: Neisseria meningitidis MC58 # 1 187 8 194 194 291 82.0 4e-79 MDEAGRGPLVGSVFAAAVILPERYDLPGLTDSKKLSEKKRDTLAVSIKEQAVSWSIASAS PEEIAELNILHATMLAMARAVQGLAVVPDKVLIDGNRVPKDLGVPAEAVVKGDSKIIEIS AASVLAKTARDAEMYALAERYPQYGFDKHKGYGTAQHLAALQKYGVLPEHRRDFAPVKAL LEQGRLFG >gi|289656333|gb|ADEA01000034.1| GENE 28 24194 - 25342 1567 382 aa, chain - ## HITS:1 COG:NMA0069 KEGG:ns NR:ns ## COG: NMA0069 COG0763 # Protein_GI_number: 15793098 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipid A disaccharide synthetase # Organism: Neisseria meningitidis Z2491 # 4 381 6 383 384 610 81.0 1e-174 MNHSPVIAISVGEASGDLLGAHLIRAIKQRRPDAKFIGIGGERMKAEGFESLYDQEKLAV RGFVEVVKRLPEILKIRKGLVNDLIRIKPDVFVGIDAPDFNLGVAEKLKKAGIPTVHYVS PSVWAWRRERVNKIVHQVNRVLCLFPMEPQLYLDAGGKAEFVGHPMAQTMPLDDDRAAAR AKLGVADEAVVFALLPGSRVSEIDYMAPLFFQTALLLLKRYPQAQFLLPAATAATRRRIG EILAQPEFSAIPVTITDKQSDTVCTAADVVLVTSGTATLEVALCKRPMVISYKISPLTYF YVKRKVKVPHVGLPNILLGKAAVPELLQHDAEPEKLAAAVAYWYDHPEAAAALKQDFREL HLLLRKDTDALAAEAVLSEAGF >gi|289656333|gb|ADEA01000034.1| GENE 29 25474 - 26250 1212 258 aa, chain - ## HITS:1 COG:NMA0090 KEGG:ns NR:ns ## COG: NMA0090 COG1043 # Protein_GI_number: 15793119 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase # Organism: Neisseria meningitidis Z2491 # 1 258 1 258 258 493 92.0 1e-139 MSLIHPTAVIDPKAELDSSVKVGAYTVIGPNVRIGANTEIGPHAVINGHTTIGENNRIFQ FASLGEIPQDKKYGGEPTKLTIGNGNTIREFTTFNLGTVTGIGETRIGDDNWIMAYCHLA HDCVIGNHTVFANNASLAGHVTIGDYVILGGYTLVFQFCRIGDYAMTAFAAGVHKDVPPY FMAAGYRAEPAGLNSEGMRRNGFSAEQIAAVKDVYKTIYHRGIPFEEARADILQRAETRP ELAVFKDFFAASTRGIIR >gi|289656333|gb|ADEA01000034.1| GENE 30 26364 - 26828 869 154 aa, chain - ## HITS:1 COG:NMA0088 KEGG:ns NR:ns ## COG: NMA0088 COG0764 # Protein_GI_number: 15793117 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases # Organism: Neisseria meningitidis Z2491 # 1 151 1 149 149 212 68.0 2e-55 MEIKLPIEVREIQEILPHRFPFLLIDRVTAAEPGKSLTAIKNVTFNEQFFQGHFPESPVM PGVLIVEAMAQACGVLAVLSQGSAKRREGEITLFAGLDNVRFKRQVVPGDQLVFDVELLA HRRGIGKFNATAKVNGELACEATIMCAQRIVEKG >gi|289656333|gb|ADEA01000034.1| GENE 31 26859 - 27911 1485 350 aa, chain - ## HITS:1 COG:NMA0087 KEGG:ns NR:ns ## COG: NMA0087 COG1044 # Protein_GI_number: 15793116 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase # Organism: Neisseria meningitidis Z2491 # 1 345 1 345 347 553 87.0 1e-157 MTVKQYTLSQITAELGGEVRGEDVSVCAVRPLAQAGVEHISFLANPKYKHEVHDSKAGAV IVSDKAAGEFTGRSLIVAADPYLYFAKVARLFSPVVKARGGVHPTAVVEPSATVPDSCEI GANAYIGANTVLGEGCRILANAVVQHDCKLGSEVVLHPNAVVYYGCTLGNRVEIHSGAVI GADGFGLAFAGDSWFKIPQTGAVTLGDDVEIGSNSNIDRGAMSDTTVGNGTKIDNQVQIG HNCKIGSHTVIAAKTGISGSVTVGNYCIIGGGVGTVGHIEIADKTTIGGGTSVTHSITES GQHVAGIFPMSSYKEWARNAVHIHRLNETGKRIKQLEQELAELKNGKQAV >gi|289656333|gb|ADEA01000034.1| GENE 32 28045 - 28563 885 172 aa, chain - ## HITS:1 COG:NMA0086 KEGG:ns NR:ns ## COG: NMA0086 COG2825 # Protein_GI_number: 15793115 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein # Organism: Neisseria meningitidis Z2491 # 8 172 3 166 166 171 66.0 6e-43 MEYSLRAKAVRAGCAVLLGCALSTQVAAAEAVQKLGFINTERVYQESKQAQAIQKTLEKE FSKRQAALQKLQQEGLKLEKQLAENKMQGAEREAAARKWSDLVQKFRKQQAQFAEDYNLR RNEEFAALQNNANRVIVQLAKKEGYDVILQDVIYVNSKFDITDSVIKAMNAR >gi|289656333|gb|ADEA01000034.1| GENE 33 28717 - 31116 3762 799 aa, chain - ## HITS:1 COG:NMA0085 KEGG:ns NR:ns ## COG: NMA0085 COG4775 # Protein_GI_number: 15793114 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein/protective antigen OMA87 # Organism: Neisseria meningitidis Z2491 # 1 799 1 797 797 1305 81.0 0 MKLKQIASTLMVLGLSPLAMADFIIQDIRVEGLQRTEPSTVFNYLPVKVGDNFSDARSEE IIKNLYATGFFDDVRVETMGNQVLLTVVERPTIATLNITGAKMLQNDAIKKNLESFGLAQ SQYFNQATLNQAVVALRDEYVGRGKQSVKITPTVKKLARNRVSIDIAIDEGKSTKIADIE FEGNHVYSDRKLMKQMSLSEGGMWTWLTQSNQFNEQKFSQDLERVSEFYQNNGYFGFRIV DTDVQTNEDKTKQTIKITVDEGERYRWGKVTIDGDTREVLKEELYKMLTMKEGKWYERQK MVKSLEAMQNRMGSAGYAFSEINVQPVPNPQTKTVDFVLHVEPGRKVYVNQINITGNNKT RDEVVRRELRQMEAAPYDTSKLQRSKERVELLGYFDNVQFDAKPVEGSPDQVDVNMSVQE RSTGSLDLSAGWVQDTGMVLSAGVSQDNLFGTGKSASARVSRSKTTVNGSLSFTDPYFTP DGVSLGYDVYGKSYDPRKASSSAKQYKTTTAGAGIRMGIPVTEYDRVNFGLAAEHLTVNT YTGAPKRYRDFINRYGKGSDGVGSFKGWLYKGTIGWGRNKTDNALWPTRGYQTGINGEVA LPGSDLKYYTLTHNQTWFFPLNKSLTLMLGGEVGYGNGYGKTKEMPFFENFYGGGLGSVR GFESGTLGPKVYDEYGEKISYGGNKKANVSAELLFPMPGIKDARTVRLSLFADAGSVWDG KTYTDKDNDEYYNGRAKQNVYGLGTSHKSTFKEELRASAGAAVTWLSPLGPMKFSYAYPF KKKEGDEIQRFQFQLGTTF >gi|289656333|gb|ADEA01000034.1| GENE 34 31121 - 32461 1466 446 aa, chain - ## HITS:1 COG:NMA0084 KEGG:ns NR:ns ## COG: NMA0084 COG0750 # Protein_GI_number: 15793113 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted membrane-associated Zn-dependent proteases 1 # Organism: Neisseria meningitidis Z2491 # 1 446 1 446 446 655 71.0 0 MLTIVSFIVAILILVSLHELGHFLVARWCGVKVVRFSVGFGKPFFTKKRGDTEWCLAPIP LGGYVKMVDTREGSVAETDLPFAFDRQHPAKRIAIVAAGPLTNLILAVVLYGLSFSFGVT EIRPYVGTVEPASIAATAGFVPEDKILSVNGKAVKDWSDVQTEILLEVESRRVDVAVQTA SGQQTVRVIDAAGTPEAGKVAKNSGNIGLWPFKMTTRLGLVMKNGPMERAGLKVGDRLLT ADGKPIEQWLDWADLFRRNPGNRITIGYERGGKVYEANVRPDAEELPDGTLVGKVGTAPQ RDEAWDKRVRYQYTPSVPEAFRMGWDKMTSYSLMTAEFFGKLMTGKASLSHVSGPLTIAD VAGRSAALGIQSYLEFLALVSVSLGVMNLLPVPVLDGGHLVYYTAEWIRGKPLSERIQAI GLRFGLAAMLMLMLVAFFNDINRLFG >gi|289656333|gb|ADEA01000034.1| GENE 35 32530 - 33714 1154 394 aa, chain - ## HITS:1 COG:NMA0083 KEGG:ns NR:ns ## COG: NMA0083 COG0743 # Protein_GI_number: 15793112 # Func_class: I Lipid transport and metabolism # Function: 1-deoxy-D-xylulose 5-phosphate reductoisomerase # Organism: Neisseria meningitidis Z2491 # 1 393 1 393 394 636 82.0 0 MTQQVLTILGSTGSIGVNTLDVISRHPEKFRVFALAGHRQVEKLAAQCAQFAPEYAVVAD AEHAVRLEALLKAQNSGTRVLHGAQALIDVASADEVDGVMCAIVGAAGLPSALAAAQKGK TIYLANKETLVVSGALFMETARTNNARVLPVDSEHNAIFQVLPHNYTGRLNGHGIRSIIL TASGGPFLDADLAGFEHITPAQAVKHPNWSMGRKISVDSATMMNKGLELIEAHWLFNCPP DNLEVVIHPQSVVHSMVRYLDGSVLAQLGNPDMRTPIAYCLGLPERIESGVGALDFDTLS ALTFRRPDFGRFPCLKLAYDAMYAGGSAPCVLNAANEMAVAAFLDGKIRFTDIARVVAHC LDAGFSDGLNDIESLLALDAQTRVRAQEYAENLN >gi|289656333|gb|ADEA01000034.1| GENE 36 33818 - 34567 1015 249 aa, chain - ## HITS:1 COG:BBK13 KEGG:ns NR:ns ## COG: BBK13 COG2859 # Protein_GI_number: 11496780 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Borrelia burgdorferi # 29 246 33 235 238 78 27.0 2e-14 MSEKNQTSSLPVLGVLLALGLMAAAFILGVQFKNLRQPGTITVKGLAEKNFKSDSATWNT GVEAHADSYQEVLDLLNARRKKLSKFLREQGFETAEMQIGLPSVERVYNEVRDEQGNVTR TPNGYDGSLDITVNTKKLDKVQAAQQAILNLRAQNEFIRFSSPQYLLGNLENIKRDLITQ ATEDAQKRAVEFAKTGGGKVGAMRSASQGSFNIYADSGSSEDDEYGGSYDKTTVGKQVRL VVTIEYGIE >gi|289656333|gb|ADEA01000034.1| GENE 37 34612 - 35406 1125 264 aa, chain - ## HITS:1 COG:NMA0082 KEGG:ns NR:ns ## COG: NMA0082 COG0575 # Protein_GI_number: 15793111 # Func_class: I Lipid transport and metabolism # Function: CDP-diglyceride synthetase # Organism: Neisseria meningitidis Z2491 # 1 264 1 264 265 374 82.0 1e-103 MLKQRVITALWLLPLMLGMLFYAPQWLWAAFSGLIALIALWEYARMSGLDKVKTNHYLAA TLLFGIVAYAGSWELPDLVWYAVLAFWLAVMPLWLNRKWKLSGGWQAYAAGWMLMVPFWF ALVSLRSDSDEALPLLAVMGLVWVADIFAYFSGKAFGKHKLAPAISPGKSWEGAAGGALC VAVYITLVRDARWLSFETGWLATVGVGLILTVVSVCGDLLESWLKRSAGIKDSSNLLPGH GGVFDRVDSLIAVLSVYAAFIHLF >gi|289656333|gb|ADEA01000034.1| GENE 38 35410 - 36156 945 248 aa, chain - ## HITS:1 COG:NMA0081 KEGG:ns NR:ns ## COG: NMA0081 COG0020 # Protein_GI_number: 15793110 # Func_class: I Lipid transport and metabolism # Function: Undecaprenyl pyrophosphate synthase # Organism: Neisseria meningitidis Z2491 # 1 248 1 248 248 439 85.0 1e-123 MKSSTQTVLAHTQIPRHIAVIMDGNGRWAKKRFLPRVMGHKRGLDALEEMVKNCAQAGVE YLTVFAFSTENWRRPEDEVSFLMGLFLQALQKQVQRLHENNMRLKVIGSRERFSTEILQG IEAAEVLTAGNTGLTLCIAADYGGRWDILQAANRAVAEGSGEITEDSLGRYLMLGDAPEP DLFIRTGGETRISNFLLWQMAYAELYFTDTLWPDFDKKSFDDAVASYQKRERRFGRTSEQ LPPDQQRS >gi|289656333|gb|ADEA01000034.1| GENE 39 36216 - 36773 673 185 aa, chain - ## HITS:1 COG:NMA0080 KEGG:ns NR:ns ## COG: NMA0080 COG0233 # Protein_GI_number: 15793109 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome recycling factor # Organism: Neisseria meningitidis Z2491 # 1 185 1 185 185 293 93.0 9e-80 MISDIQKTAEGKMQRSLEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANITLV DARTIGVKPFESNMAAKVEKAIRDSNLGLNPASVGDLIRVPMPMLTEERRKDLIKVVRNE AEEGRVSIRNVRRDANDHIKKLLKDKEVSEDEARRGEEAVQKLTDKYISEADKILAAKEE DLMAV >gi|289656333|gb|ADEA01000034.1| GENE 40 37244 - 39634 4046 796 aa, chain + ## HITS:1 COG:NMB0212 KEGG:ns NR:ns ## COG: NMB0212 COG0187 # Protein_GI_number: 15676138 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Neisseria meningitidis MC58 # 1 796 1 796 796 1504 97.0 0 MTDQKHKEYGADSIQVLEGLEAVRKRPGMYIGDTQDGSGLHHMVFEVLDNAIDEALAGHC DKITVTIHADNSVSVADNGRGMPTGIHPKEGRSAAEVIMTVLHAGGKFDNNSYKISGGLH GVGVSVVNALSDWVTLTIYRDGKEHFVRFVRGETEEPLKVVGDSDKKGTTVRFLASAETF GNVEYSFDILAKRIRELSFLNNGVDIELIDERDGKHESFALSGGVAGFVQYMNRKKTPLH EKIFYAFGEKDGMSVECAMQWNDSYQESVQCFTNNIPQRDGGTHLTALRQVMTRTINSYI EANEVAKKAKVETAGDDMREGLTCVLSVKLPDPKFSSQTKDKLVSSEIGPVVNEVINQAL TDFLEENPNEAKIITGKIVDAARAREAARKAREITRRKGVMDGLGLPGKLADCQEKDPAL SELYLVEGDSAGGSAKQGRDRKFQAILPLKGKILNVEKARFEKMLASQEVATLITALGAG IGKEEFNPEKLRYHRIIIMTDADVDGAHIRTLLLTFFYRQMPELVERGYIYIAQPPLYKA KYGKQERYLKDELEKDQWLLGLALEKAKIVSDGRTIEGAELADTAKQFLLAKTVIEQESR FVDELVLRAMLHASPIDLTSSENADKAVAELSGLLDEKEVALERIEGHEGNRFIKITRKL HGNVMVSYIEPKFLNSKAYQTLTQTAAALKGLVGEGAKLYKGENEYDVDSFETALNILLQ NAQKGMSIQRYKGLGEMNPEQLWETTMDPAVRRLLKVRIEDAIAADEVFVTLMGDEVEPR RAFIENNALIAQNIDA >gi|289656333|gb|ADEA01000034.1| GENE 41 40353 - 41090 1036 245 aa, chain + ## HITS:1 COG:no KEGG:PAU_01244 NR:ns ## KEGG: PAU_01244 # Name: not_defined # Def: hypothetical protein # Organism: P.asymbiotica # Pathway: not_defined # 78 244 83 246 248 129 44.0 1e-28 MKLNLQKTTAAVLAVLLSAGVFAANNANAFEYGYKNHKYGKKWGKPASEAEGERVMKNAA YRSGVYYTNVNRIPARVDRNGVKTVQVNDARTRQNLGRYAFNTIKSGGSEVYYGEWVGKE YAKGTNRGVYYSGNKRATSMPVSGVANYAVKGINNYTGNNPLVGTLRADFGQKVLAGSMR NNAMQMDIHSRIKPSSASFEGYARANGHYGKTEGHFFGHNASALAGVAKFKTNRNLDTAF GGVKR >gi|289656333|gb|ADEA01000034.1| GENE 42 41200 - 42639 2293 479 aa, chain + ## HITS:1 COG:no KEGG:plu3514 NR:ns ## KEGG: plu3514 # Name: not_defined # Def: hypothetical protein # Organism: P.luminescens # Pathway: not_defined # 1 479 5 499 499 280 33.0 1e-73 MYKPSACLILFLTAPVLAAPRSDFSDNRTAQRLWQDTRQTMQEQEQKVREYRLDIPAENI GQTAETDPEADQGEALFNAVNRSDWQTVRSLLDSYTRQTEYDPDIALFARASLARGEGRW KAAKQDYETLLQRHPDFTRGRLDYARLLFEGRLNREAAAEFARLQNEDLPEAVKENIAHF QDALNQRQSWQGSLSVGAVHNSNINEGSGKVWCKTEIAGECWEEFSGDKPISANGIKYEA AAVRRWQIKGHHGIAARALGYGRFYRDHRDFNEHTLNLSAGYQFENHRHTFALAPLVEWN GSGGKTLNRAYGVRSEWNLDRESWTWNTEAEWKHLSYSDKTRLLDGSLFSVYNTLSYFPR NDLMLYGGIDWQQRKAKDHVDSYRQISARLGAAKIFEAGFDASLSATFGLRSHREENAVL EQRRRDKEQTYFLSIGADRWKAAGLKPVLSYKHRRVSGNTDWLYSYKQNEIGLSLVKSF >gi|289656333|gb|ADEA01000034.1| GENE 43 42953 - 45124 2066 723 aa, chain + ## HITS:1 COG:NMA0575 KEGG:ns NR:ns ## COG: NMA0575 COG4773 # Protein_GI_number: 15793566 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid # Organism: Neisseria meningitidis Z2491 # 32 723 32 724 725 330 33.0 9e-90 MPLPKFCPARLPFAVAAALLSAYSWGAGDGVEQVDLPTVQVQGVGKQTTSNYTIPASSAA TGIRLTQRETPQSLSVVTEKQMDDQGLDTLQDVLKQTPGVFHSKMGNNVSGHSEFISRSQ AIDSISVDGAPKFLYDGKAIRRGTNNLDSALYEQVVVVRGASGLSNGGMGEPGGTVALER KKPTAKPAVSVEAGVGSWKHYRFVLDANQPLNADNTLRGRTILVSDHGGDYLPNTSRHNH TFYGILSYDLTPQTHWRVGTEIHRFRNTGSSPFSYLTVAGDPENNQPFKPFAASPRSNSS AKWAYGKENSAEIFTSINHEFENGWTLNGNYSHTYGKSDAVAGMAGPFVINPDYSAQFVA ERDQAKYTDQDFSLNLDGDYPLLGRKHEFNAGISYQYNKETPSYYKRNQDGIVPDLRLFD GNFTKPAIPYLRDGFAHMKNFSVYGSTRFKLTDRLALIGGGRFVDWQYRYSSDRNNFADS RHENKVFIPYLGASYDLNDNLTAYTSYTTIFRPQVRNLDRNGKPLEPQRGKTYELGLKAS WFEGRLNASAAAFINKRDHLAKEMYDRKNQQVYYESVDRTTTKGVELSVGGRLSDKWLLN ASYAYSKLKNDSGNLVNPSYPTHLFKLFTAYDVTDRLNLGANVNWQSGTNAYDEYQPFTA AGKEALTQRPYATLDLTAHYKIGKSTHIGLDFENVFNKRYRPMPDIHVYGTPRSLTATLK HTF >gi|289656333|gb|ADEA01000034.1| GENE 44 45231 - 45641 422 136 aa, chain - ## HITS:1 COG:NMA0499 KEGG:ns NR:ns ## COG: NMA0499 COG2969 # Protein_GI_number: 15793498 # Func_class: R General function prediction only # Function: Stringent starvation protein B # Organism: Neisseria meningitidis Z2491 # 1 136 1 130 130 191 66.0 4e-49 MTTGTKPYLLRALYEWCVDNGQTPHIVAWVNEHTRVPMQYVRENEIVLNIGPTASHNLNI DNEWVNFSARFNGVAHDIWIPVGHVVSIFARESGEGMGFEVEPYQPENTPTQEQIPQSES KDTESAKPRKGLKLVK >gi|289656333|gb|ADEA01000034.1| GENE 45 45661 - 46272 367 203 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|46133488|ref|ZP_00157281.2| COG0625: Glutathione S-transferase [Haemophilus influenzae R2866] # 1 197 8 203 212 145 37 5e-34 RIMMTLYSGITCPFSQRCRFVLYEKGMDFEIKDVDIFNKPEDLAVMNPYNQVPVLVERDL ILYESNIINEYIDERFPHPQLMPGDPVMRGRGRLVLYRMEKELFSLVQVLETPESTNKEQ AKAREAIGNGLTLLAPSFAKNKYILGDDFSMIDVALSPLLWRLDYYDIKLGKTAAPLLKY AERIFQREAFIEALTPAEKAMRR >gi|289656333|gb|ADEA01000034.1| GENE 46 46506 - 47309 833 267 aa, chain - ## HITS:1 COG:NMB2051 KEGG:ns NR:ns ## COG: NMB2051 COG2857 # Protein_GI_number: 15677873 # Func_class: C Energy production and conversion # Function: Cytochrome c1 # Organism: Neisseria meningitidis MC58 # 1 267 1 266 266 498 88.0 1e-141 MRAAKMKHTLKNWVAALLLAAPMSMALASGGHANYEKVDIDLRDQVSLQHGAQIFANYCL SCHSASGMRFNRLRDIGLTEDEIKKNLMFTTDKVGDVMLSAMNPKDAAKWFGAEPPDLTL IARSRGADYLYAYMRGFYKDPTRPNGWNNTVFDKVGMPHPLWEQQGIRAVELDTKGQPVM VKDEHGNLTPKLYWESTGLHSRRLPNGKVIEKEYDDYTRDLVNFLVYMGEPAQLERKRIG YMVMIFLLAVMLPLAYFLKKEYWKDVH >gi|289656333|gb|ADEA01000034.1| GENE 47 47309 - 48658 1790 449 aa, chain - ## HITS:1 COG:NMA0384 KEGG:ns NR:ns ## COG: NMA0384 COG1290 # Protein_GI_number: 15793392 # Func_class: C Energy production and conversion # Function: Cytochrome b subunit of the bc complex # Organism: Neisseria meningitidis Z2491 # 1 449 1 449 449 800 95.0 0 MANQTNSKAKALLDWVDARFPLSKMWNEHLAQYYAPKNFNFWYYFGSLALLVLVIQIVSG IFLTMNYKPDGNLNAYHLPAAFTAVEYIMRDVSGGWIIRYMHSTGASFFFIVVYLHMFRG LIYGSYKKPRELVWIFGSLVFLALMAEAFMGYLLPWGQMSFWGAQVIINLFSAIPVIGPD LSTWIRGDFNISDVTLNRFFALHVIAVPLVLIGLVVAHIIALHEVGSNNPDGVEIKKLKD ENGVPLDGIPFHPYYTVKDILGVVVFLIVFCAVLFFAPEGGGYFLEAPNFDAANPLKTPA HIAPVWYFTPFYAILRAIPSFLGTQVWGVIGMGAAVVLIALLPWLDRGEVKSVRYRGPIF KTALVLFIISFIGLGILGAMVATDARTLVARILSFIYFAFFLGMPFYTKLDKTQPVPERV TMSTTKQKIMFFVYTGITLVGAYLFATYI >gi|289656333|gb|ADEA01000034.1| GENE 48 48677 - 49258 630 193 aa, chain - ## HITS:1 COG:NMA0383 KEGG:ns NR:ns ## COG: NMA0383 COG0723 # Protein_GI_number: 15793391 # Func_class: C Energy production and conversion # Function: Rieske Fe-S protein # Organism: Neisseria meningitidis Z2491 # 1 192 1 192 193 350 86.0 1e-96 MDNHEINNGRRRFLILATSGAGGVAALGVATPFVASFFPSEKAKAAGAAVEIDVSKIESG QMMTAEWQGKPIWVVNRTAQQLKDLKALDGAVSDPKSEVEQQPENCKNETRSIKPNIFVA IGICTHLGCSPTYRPDVAPADLGSAWKGGFFCPCHGSKFDMAGRVYKGVPAPTNLVVPPY KYLSDTTVLVGEA >gi|289656333|gb|ADEA01000034.1| GENE 49 49383 - 50132 747 249 aa, chain - ## HITS:1 COG:NMB2054 KEGG:ns NR:ns ## COG: NMB2054 COG0327 # Protein_GI_number: 15677876 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis MC58 # 1 249 1 249 249 375 72.0 1e-104 MAGCREILDWCAQTLQTDVFKDYAPNGLQVEGKAEIGKIVTSVTASKAAVDFAAAQQADM LLVHHGMFWKSEPVTVTGWKKTRIETLLRHQINLAGYHLPLDAHPELGNNAQLAKLLDWE LEKQFGEQNLLNAGRLKKTQSLAQLAQSIELKLERKPVVVGDAGREIRRIAWCTGGAQGF FQTAIDEGVDAYVTGEISEAQYHLANETGVAFISAGHHATERYGIRALGEALAQRFDVVW CCFDEPNPA >gi|289656333|gb|ADEA01000034.1| GENE 50 50314 - 51246 1606 310 aa, chain + ## HITS:1 COG:NMA0381 KEGG:ns NR:ns ## COG: NMA0381 COG0583 # Protein_GI_number: 15793389 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Neisseria meningitidis Z2491 # 1 307 1 307 309 558 89.0 1e-159 MDSIIELRHLKTLLALEETGSVSLAAKRVFLTQSALSHQIRALENYYDTPLFERKSSPLR FTPAGERLLQLARDLLPQVAAAERDLARIIEGEAGELRLAVECHTCFDWLMPAMGEFRPM WPQVELDIVSGFQADPVGLLMQHRADLAIVSEAEKQNGIRFRPLFAYEMVGICAKDHPLA DKPVWEAEDFIGETLITYPVPDEMLDLLRKVLLPKGINPPRRHSELTIAIIQLVASRRGI AALPYWTVMPYLEKGYVVRRQITSNGLQSELYAAIRAEDADKSYLDNFCQIVRERGFADL PGLSELEMAE >gi|289656333|gb|ADEA01000034.1| GENE 51 51494 - 52948 2159 484 aa, chain + ## HITS:1 COG:NMB1999 KEGG:ns NR:ns ## COG: NMB1999 COG2239 # Protein_GI_number: 15677827 # Func_class: P Inorganic ion transport and metabolism # Function: Mg/Co/Ni transporter MgtE (contains CBS domain) # Organism: Neisseria meningitidis MC58 # 1 484 1 484 484 830 93.0 0 MSIEQTPPNLENDGIESDVERVSADFDRIHALCEILSPAFPQIEEGGPIEDEALRDKFTE LTVLLNELHPADVAAVLESLPPRERNVVWLLVTPEDDGEVLLEVSDAVRETLIESMDKDE LLAAVDDLDADELAELAGDLPHQVVYEALQTRDEEERAQVKAAMSYEDNQVGAIMDFELV SIRADVACEVVLRYLRRFESLPDHTDKIFVVDENDILQGVLPIRKLLVADPEDLVADVMA TEVVRFRPEDDVEEAAQAFERYDLVTAPVVDENKKLIGRITIDEMVDVIREESEADMLNM AGLQEEEDLFAPVWDSVKNRWMWLAVNLCTAFLASRVIGAFEGSIEKIVALAALMPIVAG IGGNSGNQTITMIVRAMAMGQLTGMQAGRLLKKEVGVALVNGIIWGTVMGVVSWLLYGSI GIGLVMIAAMTLNLLLAASVGVLIPVIMEKYGRDPALGSSVLITAVTDSGGFLIFLGLAT MFLL >gi|289656333|gb|ADEA01000034.1| GENE 52 53038 - 53721 1267 227 aa, chain - ## HITS:1 COG:NMB1604 KEGG:ns NR:ns ## COG: NMB1604 COG0588 # Protein_GI_number: 15677454 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglycerate mutase 1 # Organism: Neisseria meningitidis MC58 # 1 227 1 227 227 436 93.0 1e-122 MELVFIRHGQSEWNAKNLFTGWRDVKLSEQGLAEAAAAGKKLKENGYEFDIAFTSVLTRA IKTCNIVLEESDQLFVPQVKTWRLNERHYGQLQGLDKKQTAEKYGDEQVHIWRRSYDTLP PLLDPKDPFSAHNDRRYANLPSDVVPDGENLKVTLERVLPFWEDQIAPALLSGKRVLVAA HGNSLRALAKHIEGISDADIMGLEIPTGQPLVYKLDNDLKVVEKFYL >gi|289656333|gb|ADEA01000034.1| GENE 53 53891 - 54199 410 102 aa, chain + ## HITS:1 COG:ECs3226 KEGG:ns NR:ns ## COG: ECs3226 COG3691 # Protein_GI_number: 15832480 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 21 102 21 102 102 72 47.0 3e-13 MDKSNKPFETEEKGVGLCPDCAVETGTIFDGTDRTAAVSRLFETEQAAADALAHYTAQAR EVESEPCRIGSRIVPESGGFRLDAEFEFCCQAEKVIFQFKTR >gi|289656333|gb|ADEA01000034.1| GENE 54 54336 - 56297 2679 653 aa, chain + ## HITS:1 COG:RSp0111 KEGG:ns NR:ns ## COG: RSp0111 COG1305 # Protein_GI_number: 17548332 # Func_class: E Amino acid transport and metabolism # Function: Transglutaminase-like enzymes, putative cysteine proteases # Organism: Ralstonia solanacearum # 34 546 33 573 681 225 35.0 2e-58 MSSRFAFLSAPPPPRTALTVLAALLWAALPLVFSLPTAVVLLFAALLAVRGALLYAGIGK LPAPVLALLGVLSGVLVWTQLGTVFGREGGVAFLLLLVTLKAFESSSQRDWNVLLLAMLF LIGSAVLFNQSLLTGLWLLAALTAAAVCLAVSAGGLGLREALRCAASSLLAVLPLAAVLF VSVPRMKEPLWRIPQGGQQAKTGLSGTMQPGSISNLVQSDEWVANITFSDGLKPQPRDLY WRAIIMSDFDGTRWQAMPDFAADGAPQLRVSEGRGVRYQMIIRDQNGALPALDYPAGVLP QGLVRRLGGTVRAERSREGLRRLDLQAALGDTLPHALNEAEYRRYTRLPEGNPQTRRLAE TLAKQSPTERAFIRNALNHFSRRHFSYTLRPPTTAGRNSIDEFMFATRQGFCEHYAQSFA VIMRAAGLPARIVTGYQGAEYNPQGGFWQIRAKDAHAWTEVWLPSEQVWLRVDPTAAVAA VRTEQGIGSALPQNDRVLIADESAFSRWRDAGQFYWQQWVVNYDQSRQNSFFSLLGLGGF NLKTLLLFLPAALAAALLPLYRWQAKNRSRDHLEEGFMLLKLALLGDGGESVLSVTAAEL KNLLHENGIQDGALETLLADYDNLRYAGLPSDPRAERRWYRAAVKTARRYRQK >gi|289656333|gb|ADEA01000034.1| GENE 55 56358 - 56687 141 109 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQELKMRRSAQISDGGFTQKRHFFRVCLGAVFRPCSAVFASAKEMVTAKRFLALFCAGLL SACGSLDTDGLTDKPYSSGKRLDPNCDHYATSGDSGSCAPTRQWYPKGK >gi|289656333|gb|ADEA01000034.1| GENE 56 56959 - 59268 3160 769 aa, chain + ## HITS:1 COG:NMA1802 KEGG:ns NR:ns ## COG: NMA1802 COG0188 # Protein_GI_number: 15794693 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Neisseria meningitidis Z2491 # 15 764 13 762 765 1346 92.0 0 MNEQATLSPVGEDYLLLGQYAERAYLEYAMSVVKGRALPEVSDGQKPVQRRILFAMRDMG LTAGAKPVKSARVVGEILGKYHPHGDSSAYEAMVRMAQDFTLRYPLIDGIGNFGSRDGDG AAAMRYTEARLTPIAELLLSEINQGTVDFVPNYDGAFDEPLHLPARLPMVLLNGASGIAV GMATEIPSHNLNEVTQAAIALLKKPTLETADLMQYIPAPDFAGGGQIITPADELRRIYET GKGSVRVRARYEIEKLARGQWRMIVTELPPNANSAKILAEIEEQTNPKPKAGKKQLNQDQ LNTKKLMLDLIDRVRDESDGEHPVRLVFEPKSSRIDTDTFINTLMAQTSLEGNVSMNLVM MGLDNRPAQKNLKTILQEWLDFRVVTVTRRLKFRLNQVEKRLHILEGRLKVFLHIDEVIK VIRESDDPKADLMAAFGLTEIQAEDILEIRLRQLARLEGFKLEKELNELREEQGRLNILL GDENEKRKLIIKEMQADMKQFGDARRTLVEEAGRAVLTQTTADEPITLILSEKGWIRSRA GHNLDLSQTAFKEGDRLKQTLEGRTVLPVVILDSLGRTYTLDAAEIPGGRGDGVPVSSLI ELQNGAKPVAMLTGQPEQHYLLSGSGGYGFIAKLGDMVGRVKAGKVVMTVDSGETVLPPI AVYASSLINPDCKIVLASSDHRLLAFSIGELKVMPKGRGLQLMSLTDGASLEHTAVISSA EFTVETVGRRGAVHQERLRIRDIDGKRGKKGKVLEISGRLKRLSGVDSV >gi|289656333|gb|ADEA01000034.1| GENE 57 59293 - 59394 70 33 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSYTIGIIFLRNCVRWGAQKTEPQGDKRVFFHK >gi|289656333|gb|ADEA01000034.1| GENE 58 59416 - 60999 2270 527 aa, chain + ## HITS:1 COG:NMA1803 KEGG:ns NR:ns ## COG: NMA1803 COG0642 # Protein_GI_number: 15794694 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Neisseria meningitidis Z2491 # 8 493 7 491 505 446 47.0 1e-125 MQMNKGIQELDSLSERIPGLINIARIAIVLSLVVFKVFSTYAGGEIAASSFPTIEFYSWA TVYSVLILLSIFRPDWQVQSLDLPNASAVVDISMMMILVYIAGGLDSGFGILVLPFVATS CLLSYGHYPMLYAGYASMLYLFNLFLGNGIRFNPLSWDSHSVLTALLLIAASYLVAILTA FAAKYLEQATESASKHQLAYRRISGLNRLVLNRVQEAVIVIDATQRVWLFNKQAKTYFPS LAVDQQEVVFSELVTRWQYQPDKAFETDIHIFQHAMHVRAVPLIQEQTELLMLYVRSLRE VAAEAMSTKLTSLGQLTANLAHEIRNPMSAIRHASDLLQDGEEEDPVKTKLYGIIDSNIQ RIDKMLEDVSLLNKRDNINREPLNLMKFWLAFKQEFTLNNPDAVGCLRMNMEGSNLTVLA DTMHVQQIMWNLCNNAWRHSRQNENAITVLIRPSGRMHISIVVADNGKGISAEVRDHLFE PFYTTEKQGTGLGLYVARELAHANMGQLHYHPEMNGFELILPRELNE >gi|289656333|gb|ADEA01000034.1| GENE 59 60992 - 62617 2207 541 aa, chain + ## HITS:1 COG:XF2545 KEGG:ns NR:ns ## COG: XF2545 COG2204 # Protein_GI_number: 15839134 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains # Organism: Xylella fastidiosa 9a5c # 9 538 35 494 497 399 45.0 1e-111 MSKLQDPVLVVDDEADIRDLMEMTLMKMGLRVQTAVGVEDAKDKLDNDDYSLVLTDMRMP DGSGLEVVQYINELMLDTPVAVITAFGNADQAVEALKAGAFDYLQKPITLSQLRSLVKSA VSVSDHAEDAAQAPSEKPQPAPVAAAFNKPKAQPPKPAKRDLSGSVSIPESLRSIKERFS SGEIAIRPNEEPPELGGEADMPRLLGMSPQMVEVRHLIRRLARSGVPVYISGESGTGKEQ AARTIHELSDRADKPFIAVNCGAIPENLMESEFFGYKKGSFTGADQDRLGFFQHADGGTL FLDEVADLPLAMQVKLLRAIQEKAVRRIGDARETFVDVRIICATHKNLEALVESGAFRQD LYYRLNVVTLHMPPLREMREDMGALILYLLYKHRHGTQTYKLSPKAQEALLHYSYPGNFR ELENILERAVALTVGQVIQLDDLQIQKAPLPKENHQNGDVTLDDISESEGQQMQPENSSA HGALPPFDPRTMQIQDYLDQIERDIIEQALQQTRYNRTQAAKLLGISFRSMRYRMERLDI N >gi|289656333|gb|ADEA01000034.1| GENE 60 62833 - 63573 278 246 aa, chain - ## HITS:1 COG:NMB0206 KEGG:ns NR:ns ## COG: NMB0206 COG2360 # Protein_GI_number: 15676133 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Leu/Phe-tRNA-protein transferase # Organism: Neisseria meningitidis MC58 # 1 239 1 237 241 338 65.0 6e-93 MRVPFLPPQEYVFPNPDYAIAECEGLVGISADLDAGRLIAAYRRGIFPWFRQNGLFYWFA TAPRTVLLPENIHIGKSLAKTLRGKAYRVTVNQAFVDVIAGCAAAPRPNQDGTWIAPEFQ TAYFDLHRLGFAHSFECWYPDTDDGGRLKLAGGLYGVQIGRVFYGESMFARAPDASKIAF ACAVPFLERCGVELIDCQQDTEHLKRFGSQQMDFHEFHTALVRLNDMPLKEAVGRRILAD NVKRQD >gi|289656333|gb|ADEA01000034.1| GENE 61 63706 - 64143 640 145 aa, chain - ## HITS:1 COG:NMA0064 KEGG:ns NR:ns ## COG: NMA0064 COG0735 # Protein_GI_number: 15793093 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Neisseria meningitidis Z2491 # 5 145 4 144 144 259 94.0 2e-69 MENNFSNIAQLKDSGLKVTGPRLKILDLFEAHAEEHLSAEDVYRILLEQGVEIGVATIYR VLTQFEQAGILQRHHFETGKAVYELDKGDHHDHIVCVKCGSVHEFHNPEIEALQDRIAEE NGYRIVDHALYMYGVCADCQAKAKR >gi|289656333|gb|ADEA01000034.1| GENE 62 64361 - 64762 593 133 aa, chain + ## HITS:1 COG:NMA0065 KEGG:ns NR:ns ## COG: NMA0065 COG2913 # Protein_GI_number: 15793094 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Small protein A (tmRNA-binding) # Organism: Neisseria meningitidis Z2491 # 1 122 1 122 125 171 72.0 3e-43 MNKTLYLALAALLGLAACSAERVSLFPSYKLKVVQGNELDPRAVVSLQPGMTRDQVILLL GTPLLRDPFHADRWDYTFNTSRNGVIKEQVDLILYFENGLLARAEGNAVQKAIEAVQAEQ KSASGGQATAPLK >gi|289656333|gb|ADEA01000034.1| GENE 63 64783 - 65589 1386 268 aa, chain + ## HITS:1 COG:NMB0203 KEGG:ns NR:ns ## COG: NMB0203 COG0289 # Protein_GI_number: 15676130 # Func_class: E Amino acid transport and metabolism # Function: Dihydrodipicolinate reductase # Organism: Neisseria meningitidis MC58 # 1 268 1 268 269 470 93.0 1e-133 MSALKIAIAGVNGRMGRVLVEAVNNHPDTILSGALEHAGSEVLGLDAGFASGIKTGIAIS DDVDAVLAQSDVLIDFTRPEPTLKHLQKCVEKGVNIIIGTTGFDDAGKAAIRSASEKTGV VFAANFSVGVNLTFHILDTVARVLNEGYDIEIIEGHHRHKVDAPSGTALRMGEVIADALG RDLKQCAVYGREGHTGPRDPSTIGFATVRAGDIVGDHTALFATDGERVEITHKASSRMTF AAGAVRAAVWANGKTGLYDMQDVLGLRN >gi|289656333|gb|ADEA01000034.1| GENE 64 65727 - 67001 1927 424 aa, chain + ## HITS:1 COG:NMB0360 KEGG:ns NR:ns ## COG: NMB0360 COG0477 # Protein_GI_number: 15676275 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Neisseria meningitidis MC58 # 1 421 1 421 427 635 83.0 0 MTTPQSSTLRQIFSRNMLICIFTGFTSGLPLYFLINLIPAWLRGEHIDLKTIGLMALIGL PFTWKFIWSPVMDAVRLPFLGRRRGWMLVTQIGLLLALAAYAFLNPHQHLPVIIGLSAVV AFFSASQDIVLDAFRREILPDEELGLGNSIHVNAYRIAALVPGSLSLILADRMPWGNVFI ITALFMLPGLLMTLFLAKEPDLPPAAPRTLVQTVVEPFQEFFSRKGTKQAALVLLFIFLY KLGDSMATSLATPFYLDMGFSKTDIGLIAKNAGLWPAVIAGILGGIWMLKLGINKALWLF GVVQVVTILGFVWLAGFGRFDTITLTEQMMLAGVIGAEAVGVGLGTAAFVSYMARETNPA FTATQLALFTSLSAVPRTFINATTGYLIEWLGYVHFFWLCFILALPGMFLLLKVAPWGGD KPTN >gi|289656333|gb|ADEA01000034.1| GENE 65 67170 - 68261 1892 363 aa, chain + ## HITS:1 COG:NMA0618 KEGG:ns NR:ns ## COG: NMA0618 COG0012 # Protein_GI_number: 15793608 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted GTPase, probable translation factor # Organism: Neisseria meningitidis Z2491 # 1 363 1 363 363 698 98.0 0 MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNP QKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIVHVSGKVD PIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQKLVELCKKLLPHLDEGKPVRS FGLDAEELAMLKPLFLLTAKPAMYVGNVAEDGFENNPHLDRLKELAEKENAPVVAVCAAM ESEIAELEDDEKAEFLAEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT APQAAGVIHTDFERGFIRAQVISYDDFVSLGGEAKAKEAGKMRVEGKEYVVQDGDVMHFL FNV >gi|289656333|gb|ADEA01000034.1| GENE 66 68350 - 69168 483 272 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298370330|ref|ZP_06981646.1| ## NR: gi|298370330|ref|ZP_06981646.1| hypothetical protein HMPREF9016_01667 [Neisseria sp. oral taxon 014 str. F0314] # 1 272 1 272 272 515 100.0 1e-144 MKKSILYMALFFAASTAQAQTPQQIVQKFYPKYSQKYQCYQVNVKDNGQYCVRQTKSETR QTAQGKLMYLLFTGNAFNFEKGIADGAHVQSGLAGVFVLKQTGNDWKLLAAQPHGWAGSF GNAPEAKSWSFHEFGKDKWGFLTLHGDVHNGYAGSAYQLFVHDGAKKITKSSITAEAENT GALGDCSENFYKGRKNTATERRKCLSELYNLSSKIKILKDGKTSAGFYPLQLTVSGFDGS KKYTNKVFIATYNSAKGYYSTPKDYPLADKDF >gi|289656333|gb|ADEA01000034.1| GENE 67 69244 - 70542 820 432 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 [Phaeobacter gallaeciensis BS107] # 8 386 13 384 418 320 44 1e-86 MKSVIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQ QAGHTPIALVGGATGMIGDPSFKAVERSLNSAETVAGWVESIRNQLKPFLSFEGENAAIM ANNADWFGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIERDDVGISFTEFAYSLLQGYDF AELNKRHGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGA VWLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGTKPEAQRIL AEEMTRLIHGEAALQAAQRISESLFAEDQSHLTESDFEQLALDGLPAFEVSDGFNVVEAL VKTGLASSNKEARGFVNSKAVLLNGQAAELNNPNHAAERPDDAYLLTDAHKRFGKYTIVR RGKRNHALLVWQ >gi|289656333|gb|ADEA01000034.1| GENE 68 70649 - 72922 210 757 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|22537308|ref|NP_688159.1| 30S ribosomal protein S1 [Streptococcus agalactiae 2603V/R] # 637 756 276 399 400 85 35 7e-16 MNITQILSQELSATAAQITAAVELLDDGATVPFIARYRKEATGGLDDTQLRQLAERLQYL RELEERKAVVLKSIEEQGKLTPELQAAIEAADNKTALEDLYLPYKPKRRTKAQIAREHGL QPLADVLLAEQPQDVEAAAQGYLNENVPDAKAALDGARAILMEQFAEDAELIGTLRDKLW NEAEIHAQVIEGKETEGEKFSDYFDHRELVRAMPSHRALAVLRGRNEGVLNIALKFQPDD TPITQQSEYEQIIARRFKVSDGHKWLRDTVRLTWRAKIFLSLELEALGRLKEAADTDAIT VFARNLKDLLLAAPAGRLTTLGLDPGYRNGVKCAVVDDTGKLLDTVIVYLHQENNMLATL SRLIKQHGVKLIAIGNGTASRETDKIAGELVRGMPEMGLHKIVVSEAGASIYSASELAAR EFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVNQSQLAKSLDAVVEDCV NAVGVDVNTASAPLLARISGLNQTLAQNIVAYRDENGAFDSRKKLLKVPRLGEKTFEQAA GFLRINGGKEPLDASAVHPEAYPVVAKMLAQQGITAAELIGNRERVKQIKASDFTDERFG LPTILDILSELEKPGRDPRGEFQTASFAEGIHEISDLQVGMILEGVVSNVANFGAFVDIG VHQDGLVHISALSNRFVQDPREVVKAGDVVKVKVLEVDAARKRIALTMRLDDEAGGATKG NRSSETRHQERRDRKPQRNDRAPTNSAMADAFAKLKR >gi|289656333|gb|ADEA01000034.1| GENE 69 70649 - 72922 317 757 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|87310993|ref|ZP_01093118.1| ribosomal protein S1-like RNA-binding domain protein [Blastopirellula marina DSM 3645] # 577 756 813 990 1043 126 39 3e-28 MNITQILSQELSATAAQITAAVELLDDGATVPFIARYRKEATGGLDDTQLRQLAERLQYL RELEERKAVVLKSIEEQGKLTPELQAAIEAADNKTALEDLYLPYKPKRRTKAQIAREHGL QPLADVLLAEQPQDVEAAAQGYLNENVPDAKAALDGARAILMEQFAEDAELIGTLRDKLW NEAEIHAQVIEGKETEGEKFSDYFDHRELVRAMPSHRALAVLRGRNEGVLNIALKFQPDD TPITQQSEYEQIIARRFKVSDGHKWLRDTVRLTWRAKIFLSLELEALGRLKEAADTDAIT VFARNLKDLLLAAPAGRLTTLGLDPGYRNGVKCAVVDDTGKLLDTVIVYLHQENNMLATL SRLIKQHGVKLIAIGNGTASRETDKIAGELVRGMPEMGLHKIVVSEAGASIYSASELAAR EFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVNQSQLAKSLDAVVEDCV NAVGVDVNTASAPLLARISGLNQTLAQNIVAYRDENGAFDSRKKLLKVPRLGEKTFEQAA GFLRINGGKEPLDASAVHPEAYPVVAKMLAQQGITAAELIGNRERVKQIKASDFTDERFG LPTILDILSELEKPGRDPRGEFQTASFAEGIHEISDLQVGMILEGVVSNVANFGAFVDIG VHQDGLVHISALSNRFVQDPREVVKAGDVVKVKVLEVDAARKRIALTMRLDDEAGGATKG NRSSETRHQERRDRKPQRNDRAPTNSAMADAFAKLKR Prediction of potential genes in microbial genomes Time: Thu May 26 13:50:50 2011 Seq name: gi|289656332|gb|ADEA01000035.1| Neisseria sp. oral taxon 014 str. F0314 cont1.35, whole genome shotgun sequence Length of sequence - 96260 bp Number of predicted genes - 99, with homology - 94 Number of transcription units - 52, operones - 22 average op.length - 3.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 55 - 1116 1200 ## COG3177 Uncharacterized conserved protein + Prom 1227 - 1286 3.4 2 2 Tu 1 . + CDS 1309 - 2019 1002 ## COG0526 Thiol-disulfide isomerase and thioredoxins + Term 2042 - 2089 12.4 + Prom 2098 - 2157 3.4 3 3 Tu 1 . + CDS 2194 - 2688 623 ## COG3193 Uncharacterized protein, possibly involved in utilization of glycolate and propanediol + Term 2704 - 2753 14.5 - Term 2638 - 2679 -0.0 4 4 Tu 1 . - CDS 2763 - 5600 4592 ## COG0525 Valyl-tRNA synthetase - Prom 5657 - 5716 7.0 - Term 5667 - 5712 14.4 5 5 Op 1 . - CDS 5737 - 6030 601 ## LHK_02067 putative transcriptional regulator, XRE family protein - Prom 6251 - 6310 7.0 - Term 6054 - 6093 6.0 6 5 Op 2 . - CDS 6313 - 7092 1229 ## COG0024 Methionine aminopeptidase - Prom 7142 - 7201 2.6 7 6 Tu 1 . - CDS 7222 - 7833 585 ## gi|298370339|ref|ZP_06981655.1| periplasmic protein 8 7 Tu 1 11/0.000 - CDS 7959 - 8567 942 ## COG2823 Predicted periplasmic or secreted lipoprotein - Term 8576 - 8638 24.6 9 8 Op 1 11/0.000 - CDS 8642 - 9235 906 ## COG0279 Phosphoheptose isomerase 10 8 Op 2 . - CDS 9243 - 9590 229 ## COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase - Prom 9730 - 9789 7.4 + Prom 9605 - 9664 3.7 11 9 Op 1 . + CDS 9687 - 10574 1155 ## COG0313 Predicted methyltransferases 12 9 Op 2 . + CDS 10600 - 10968 663 ## COG3189 Uncharacterized conserved protein + Term 11126 - 11166 9.4 + TRNA 11040 - 11116 84.5 # Pro CGG 0 0 - Term 11538 - 11576 3.3 13 10 Tu 1 4/0.100 - CDS 11675 - 12115 421 ## COG4969 Tfp pilus assembly protein, major pilin PilA - Prom 12160 - 12219 5.7 - Term 12164 - 12194 4.1 14 11 Tu 1 . - CDS 12230 - 12694 529 ## COG4969 Tfp pilus assembly protein, major pilin PilA - Prom 12725 - 12784 4.2 - Term 13307 - 13357 14.7 15 12 Op 1 24/0.000 - CDS 13386 - 14105 1242 ## COG0528 Uridylate kinase - Prom 14292 - 14351 6.4 - Term 14316 - 14356 3.5 16 12 Op 2 38/0.000 - CDS 14376 - 15230 695 ## PROTEIN SUPPORTED gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts - Term 15309 - 15339 1.8 17 12 Op 3 . - CDS 15354 - 16082 1201 ## PROTEIN SUPPORTED gi|121635755|ref|YP_976000.1| 30S ribosomal protein S2 - Prom 16160 - 16219 4.2 - Term 16170 - 16201 0.1 18 13 Tu 1 . - CDS 16255 - 16461 317 ## NGK_2266 hypothetical protein - Prom 16493 - 16552 6.0 + Prom 16445 - 16504 5.0 19 14 Op 1 3/0.300 + CDS 16527 - 17144 646 ## COG0212 5-formyltetrahydrofolate cyclo-ligase 20 14 Op 2 1/0.500 + CDS 17141 - 17731 394 ## PROTEIN SUPPORTED gi|226870331|ref|ZP_03819946.1| acetyltransferase, ribosomal protein N-acetylase + Term 17733 - 17779 15.2 + Prom 17777 - 17836 4.0 21 15 Tu 1 . + CDS 17928 - 19400 2199 ## COG0579 Predicted dehydrogenase + Term 19414 - 19470 17.7 + Prom 19493 - 19552 7.5 22 16 Tu 1 . + CDS 19746 - 19943 292 ## + Prom 19964 - 20023 3.8 23 17 Tu 1 . + CDS 20055 - 20225 159 ## gi|298370355|ref|ZP_06981671.1| hypothetical protein HMPREF9016_01692 24 18 Tu 1 . - CDS 20506 - 21771 1661 ## COG1519 3-deoxy-D-manno-octulosonic-acid transferase - Prom 21801 - 21860 2.5 25 19 Tu 1 . - CDS 21878 - 23023 1662 ## COG1289 Predicted membrane protein 26 20 Tu 1 . - CDS 23169 - 24503 972 ## COG0415 Deoxyribodipyrimidine photolyase - Prom 24719 - 24778 6.1 + Prom 24692 - 24751 4.5 27 21 Tu 1 . + CDS 24781 - 25212 255 ## AOLE_09360 hypothetical protein + Term 25223 - 25280 -0.2 - Term 25304 - 25348 4.8 28 22 Op 1 . - CDS 25463 - 26590 2067 ## COG0263 Glutamate 5-kinase 29 22 Op 2 . - CDS 26645 - 26944 499 ## NMCC_1886 hypothetical protein - Term 27220 - 27263 8.3 30 23 Op 1 22/0.000 - CDS 27275 - 28750 2099 ## COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N) 31 23 Op 2 . - CDS 28760 - 30256 2262 ## COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M) - Prom 30276 - 30335 4.5 32 24 Op 1 . - CDS 30478 - 31626 563 ## NMO_1781 hypothetical protein 33 24 Op 2 . - CDS 31684 - 32004 434 ## COG0662 Mannose-6-phosphate isomerase - Prom 32094 - 32153 2.6 - Term 32053 - 32090 0.2 34 25 Op 1 . - CDS 32207 - 32533 341 ## STER_1555 hypothetical protein 35 25 Op 2 . - CDS 32588 - 34612 3123 ## COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit - Prom 34729 - 34788 1.6 36 26 Op 1 2/0.500 - CDS 34817 - 35362 791 ## COG2184 Protein involved in cell division 37 26 Op 2 30/0.000 - CDS 35429 - 35734 542 ## COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) 38 26 Op 3 28/0.000 - CDS 35731 - 36402 839 ## COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J) 39 26 Op 4 . - CDS 36414 - 36893 661 ## COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 40 26 Op 5 . - CDS 36952 - 37521 551 ## gi|298370372|ref|ZP_06981688.1| hypothetical protein HMPREF9016_01709 41 26 Op 6 . - CDS 37594 - 38958 1061 ## COG2931 RTX toxins and related Ca2+-binding proteins 42 26 Op 7 . - CDS 38955 - 39857 420 ## gi|298370374|ref|ZP_06981690.1| hypothetical protein HMPREF9016_01711 43 26 Op 8 18/0.000 - CDS 39921 - 40997 1755 ## COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H) 44 26 Op 9 . - CDS 41000 - 43261 2757 ## COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) - Prom 43335 - 43394 7.0 - Term 43462 - 43492 -0.1 45 27 Tu 1 . - CDS 43632 - 43988 202 ## COG2852 Uncharacterized protein conserved in bacteria - Prom 44042 - 44101 3.9 - Term 44114 - 44146 -0.1 46 28 Op 1 . - CDS 44174 - 45469 1959 ## COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit 47 28 Op 2 . - CDS 45558 - 46082 284 ## ACL_0934 hypothetical protein 48 28 Op 3 15/0.000 - CDS 46109 - 46582 748 ## COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit 49 28 Op 4 22/0.000 - CDS 46582 - 47838 1863 ## COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7 50 28 Op 5 34/0.000 - CDS 47828 - 48421 886 ## COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit 51 28 Op 6 30/0.000 - CDS 48433 - 48915 457 ## PROTEIN SUPPORTED gi|154175216|ref|YP_001407461.1| NADH dehydrogenase subunit B 52 28 Op 7 . - CDS 48906 - 49262 238 ## PROTEIN SUPPORTED gi|154175415|ref|YP_001407462.1| NADH dehydrogenase subunit A - Prom 49305 - 49364 5.7 - Term 49545 - 49592 10.3 53 29 Op 1 . - CDS 49628 - 50359 926 ## COG1611 Predicted Rossmann fold nucleotide-binding protein - Prom 50383 - 50442 2.7 54 29 Op 2 . - CDS 50454 - 50894 567 ## Aave_2582 hypothetical protein - Prom 51047 - 51106 2.7 + Prom 50958 - 51017 3.2 55 30 Tu 1 . + CDS 51046 - 52908 2673 ## COG0557 Exoribonuclease R 56 31 Tu 1 . + CDS 53011 - 53343 573 ## DP2299 hypothetical protein 57 32 Tu 1 . - CDS 53493 - 54275 1099 ## COG4137 ABC-type uncharacterized transport system, permease component - Prom 54337 - 54396 4.3 + Prom 54301 - 54360 4.9 58 33 Op 1 . + CDS 54437 - 55807 2234 ## COG0541 Signal recognition particle GTPase + Prom 55895 - 55954 3.0 59 33 Op 2 . + CDS 56179 - 56640 575 ## NGK_2099 hypothetical protein + Term 56655 - 56709 20.1 - Term 56637 - 56701 23.6 60 34 Op 1 2/0.500 - CDS 56716 - 57321 1020 ## COG3560 Predicted oxidoreductase related to nitroreductase 61 34 Op 2 . - CDS 57418 - 57819 692 ## COG2259 Predicted membrane protein + Prom 58079 - 58138 6.3 62 35 Tu 1 . + CDS 58167 - 59063 1324 ## COG0583 Transcriptional regulator + Term 59093 - 59143 15.1 - Term 59077 - 59135 18.5 63 36 Op 1 16/0.000 - CDS 59151 - 63383 6312 ## COG2911 Uncharacterized protein conserved in bacteria 64 36 Op 2 . - CDS 63440 - 65305 2877 ## COG0729 Outer membrane protein + Prom 65541 - 65600 7.0 65 37 Tu 1 . + CDS 65628 - 66845 1832 ## COG3633 Na+/serine symporter + Term 66869 - 66910 11.3 + Prom 66892 - 66951 6.8 66 38 Op 1 . + CDS 67031 - 68476 2196 ## COG3104 Dipeptide/tripeptide permease 67 38 Op 2 . + CDS 68603 - 70390 2959 ## COG0006 Xaa-Pro aminopeptidase + Term 70419 - 70468 9.7 + Prom 70439 - 70498 2.6 68 39 Op 1 . + CDS 70558 - 71088 180 ## CLD_2270 hypothetical protein 69 39 Op 2 . + CDS 71117 - 71716 -251 ## NMB2137 hypothetical protein 70 39 Op 3 22/0.000 + CDS 71776 - 72480 668 ## COG0850 Septum formation inhibitor 71 39 Op 4 22/0.000 + CDS 72513 - 73325 1134 ## COG2894 Septum formation inhibitor-activating ATPase 72 39 Op 5 2/0.500 + CDS 73329 - 73595 437 ## COG0851 Septum formation topological specificity factor 73 39 Op 6 . + CDS 73599 - 74519 1236 ## COG0583 Transcriptional regulator + Term 74534 - 74597 23.2 - Term 74654 - 74690 2.3 74 40 Op 1 42/0.000 - CDS 74708 - 75133 430 ## COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) 75 40 Op 2 42/0.000 - CDS 75144 - 76541 1688 ## COG0055 F0F1-type ATP synthase, beta subunit 76 40 Op 3 42/0.000 - CDS 76580 - 77455 720 ## COG0224 F0F1-type ATP synthase, gamma subunit 77 40 Op 4 41/0.000 - CDS 77480 - 79027 1129 ## COG0056 F0F1-type ATP synthase, alpha subunit 78 40 Op 5 38/0.000 - CDS 79038 - 79571 430 ## COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 79 40 Op 6 37/0.000 - CDS 79576 - 80046 449 ## COG0711 F0F1-type ATP synthase, subunit b - Term 80067 - 80118 0.8 80 40 Op 7 40/0.000 - CDS 80121 - 80357 446 ## COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K 81 40 Op 8 8/0.100 - CDS 80427 - 81293 505 ## COG0356 F0F1-type ATP synthase, subunit a 82 40 Op 9 2/0.500 - CDS 81283 - 81660 187 ## COG3312 F0F1-type ATP synthase, subunit I - Prom 81780 - 81839 4.6 - Term 81787 - 81820 -0.7 83 41 Tu 1 . - CDS 81964 - 82824 1222 ## COG1475 Predicted transcriptional regulators - Prom 82874 - 82933 7.0 84 42 Tu 1 . + CDS 83426 - 83989 769 ## COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase + Term 84041 - 84078 8.7 - Term 84201 - 84232 2.5 85 43 Op 1 . - CDS 84305 - 85789 1328 ## COG2931 RTX toxins and related Ca2+-binding proteins 86 43 Op 2 . - CDS 85808 - 86449 526 ## gi|298370418|ref|ZP_06981734.1| conserved hypothetical protein - Prom 86489 - 86548 3.2 - Term 86474 - 86509 -0.7 87 44 Tu 1 . - CDS 86581 - 88092 2471 ## COG1190 Lysyl-tRNA synthetase (class II) - Prom 88155 - 88214 4.8 - Term 88772 - 88835 11.0 88 45 Tu 1 . - CDS 88893 - 89366 170 ## COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis - Prom 89477 - 89536 4.1 - Term 89860 - 89906 -0.7 89 46 Tu 1 . - CDS 89933 - 90280 165 ## COG2948 Type IV secretory pathway, VirB10 components 90 47 Tu 1 . - CDS 90478 - 90633 69 ## 91 48 Op 1 8/0.100 - CDS 91192 - 91944 156 ## COG3504 Type IV secretory pathway, VirB9 components 92 48 Op 2 . - CDS 91985 - 92830 240 ## COG3736 Type IV secretory pathway, component VirB8 93 48 Op 3 . - CDS 92860 - 93285 189 ## XAC2622 hypothetical protein - Prom 93481 - 93540 9.5 + Prom 93112 - 93171 4.1 94 49 Tu 1 . + CDS 93257 - 93346 103 ## + Term 93581 - 93624 2.1 - Term 93851 - 93901 11.1 95 50 Op 1 . - CDS 93907 - 94083 102 ## 96 50 Op 2 . - CDS 94133 - 94405 113 ## gi|298370425|ref|ZP_06981741.1| arabinan endo-1,5-alpha-L-arabinosidase A + Prom 94136 - 94195 2.1 97 51 Tu 1 . + CDS 94230 - 94652 69 ## - Term 94726 - 94779 15.5 98 52 Op 1 . - CDS 94786 - 95313 116 ## gi|255066632|ref|ZP_05318487.1| hypothetical protein NEISICOT_01642 99 52 Op 2 . - CDS 95324 - 96247 964 ## Smal_2439 TrbL/VirB6 plasmid conjugal transfer protein Predicted protein(s) >gi|289656332|gb|ADEA01000035.1| GENE 1 55 - 1116 1200 353 aa, chain + ## HITS:1 COG:NMA1635 KEGG:ns NR:ns ## COG: NMA1635 COG3177 # Protein_GI_number: 15794529 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 7 351 16 359 375 260 40.0 3e-69 MYSIEQFPPEIDFETVAVLKKLASAHRYLAELKGICRSIPNQGILINTLSLQEAKDSSEI ENIITTHDELFRAGISASPSSPAIKEVQNYASALHCGFGLIQKHGMLTNNHILTIQAELE KNRAGFRKQSGTMLKNDRTGETVYTPPQHTDDIIRLMGRLEAFINDDNTEKPIDPLIRMA LLHHQFESIHPFYDGNGRTGRIINVLYLVLTGLLDIPVLYLSRYLVRNKSEYYRLLQHVR DTGEWEGWLLYMLEAVEQTAKDGIDTVQHIHQAMLDYKHRIRQNFSFYSQDLINHLFNHP YTKIDFLMKTLNVSRPSAAKYLDELTEGGFLHKEKIGRSNYYINIALMKILLP >gi|289656332|gb|ADEA01000035.1| GENE 2 1309 - 2019 1002 236 aa, chain + ## HITS:1 COG:NMA2191 KEGG:ns NR:ns ## COG: NMA2191 COG0526 # Protein_GI_number: 15795061 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Neisseria meningitidis Z2491 # 19 231 19 228 231 288 73.0 9e-78 MNLKKISLAALTLFALAACGGKTETSVPADGAQQSTSSAPVPAAVTSLVEGQNYTVLPVS IPQNQAGKIEVLEFFGYFCPHCQHLEPVLTEHVKTFKDDTYLRGEHVVWNAEMKPLARLA AAVDIAGEKAKADSLIFNAYINQKINLADADTVKKWLNEQTAFDGKKVLAAYESSESQAR ADQMEKLTNTYQITSTPAVIVGGKYAVKFADWQSGMQTVDLLIDKVREEQKTQPAK >gi|289656332|gb|ADEA01000035.1| GENE 3 2194 - 2688 623 164 aa, chain + ## HITS:1 COG:PA1329 KEGG:ns NR:ns ## COG: PA1329 COG3193 # Protein_GI_number: 15596526 # Func_class: R General function prediction only # Function: Uncharacterized protein, possibly involved in utilization of glycolate and propanediol # Organism: Pseudomonas aeruginosa # 25 159 3 137 143 93 40.0 2e-19 MRGSKSVALLCALAFSAPVFSAKLTKTLPGDLTTAQAQVVVQASMKKAHEIKVPMNIAVM DAGGNLKAFARMDDAFIGSIDIAQKKAKTARYFNMSTRDLGKASQPGGELYGIEVTNNGL AIFAGGVLLVNKAGVIVGSVGVSGGSVDEDESVAKAGAAALPSR >gi|289656332|gb|ADEA01000035.1| GENE 4 2763 - 5600 4592 945 aa, chain - ## HITS:1 COG:NMB0174 KEGG:ns NR:ns ## COG: NMB0174 COG0525 # Protein_GI_number: 15676101 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Valyl-tRNA synthetase # Organism: Neisseria meningitidis MC58 # 1 945 1 945 945 1912 97.0 0 MLDKYNPAEIESKHYQNWETQGYFQPDMDLTKPSFSIQLPPPNVTGTLHMGHAFNQTIMD GLTRYYRMKGCNTAWIPGTDHAGIATQIVVERQLAAQNVSRHDLGREKFLEKVWEWKEVS GGTITQQMRRVGCSADWTREYFTMDDVRAETVTEVFVRLYEQGLIYRGKRLVNWDPVLGT AVSDLEVESVEEQGSMWYIRYPLADNPAEAVIVATTRPETLLGDVAVAVNPEDERYTHLI GKELILPLTGRTIPVIADEYVEKDFGTGCVKITPAHDFNDYEVGKRHDTRLINVFDLEAK VLANAEVFNFKGEAQQGFALPEKYAGLDRFAARKQMVADLQEQGLLVEIKAHTLMTPKGD RTGSVIEPMLTSQWFVAMSATPNGGEPDSEFKGLSLADKAKKAVDSGAVRFIPENWVNTY NQWMNNIQDWCISRQLWWGHQIPAWYDEAGNVYVARNQAEAEKQAGKTGLTREEDVLDTW FSSALVPFSTLGWPSETDELKAFLPSTVLVTGYEIIFFWVARMIMMTTHFTGKVPFKDVY IHGIVRDHEGKKMSKSEGNVIDPVDLIDGIDLDKLLVKRTTGLRKPETAPKVEEATKKLF PEGIPSMGADALRFTMASYASLGRSVNFDFKRAEGYRNFCNKIWNATNFVLMNTENQDCG YGATATEPRGYSFPDMWIIGRLNQTIEQVTQAYETYRFDLAAETLYSFVWNDYCDWYLEL AKVQLQTGCASRQRATRHTLLRVLEAALRLLHPIIPFITEELWQTVAPMCDAKTADSIML ARFPEADREQIVQTTFEQMTVLQDLIGAVRNLRGEMGIQPNVKAPLFVESADDLADYLKY LPMMTRLTEAQQVAALPESEDAPVAVCNGARLMLKVEIDKAAETARLGKEAEKLQKALDK LNAKLSKPGYTEKAPAHLVEKDKADLAELEDKMAKVQNQLAKLKD >gi|289656332|gb|ADEA01000035.1| GENE 5 5737 - 6030 601 97 aa, chain - ## HITS:1 COG:no KEGG:LHK_02067 NR:ns ## KEGG: LHK_02067 # Name: not_defined # Def: putative transcriptional regulator, XRE family protein # Organism: L.hongkongensis # Pathway: not_defined # 1 93 1 93 106 127 73.0 1e-28 MKSFEKIDNIRDIRKKLGLNQMDFWSRIGVTQSGGSRYESGRNMPKPVRELLRLVHIERV DLAKVNREDLAVASLLKNRDPELYASLKKEAKSDKGK >gi|289656332|gb|ADEA01000035.1| GENE 6 6313 - 7092 1229 259 aa, chain - ## HITS:1 COG:NMA0337 KEGG:ns NR:ns ## COG: NMA0337 COG0024 # Protein_GI_number: 15793347 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionine aminopeptidase # Organism: Neisseria meningitidis Z2491 # 1 259 1 259 259 508 94.0 1e-144 MNEVIIKTPEEIEKMRELGKLVAEALDYIGQFVKPGITTNEIDKLVYDYHVNVQGGYPAP LHYGNPPYPKSCCTSVNHVICHGIPDDKPLKEGDIINIDLTIKKDGFHGDSSRMFAVGKI SPIAQRLIDVTHESMMAGIAAVKPGATLGDVGYACQQVAENAGYSVVQEFCGHGIGRGFH EAPQVLHYGRKGQGLVLKPGMIFTIEPMINQGKRHLRILPDGWTVVTKDRSLSAQWEHEV LVTETGCEILTISPASGKP >gi|289656332|gb|ADEA01000035.1| GENE 7 7222 - 7833 585 203 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298370339|ref|ZP_06981655.1| ## NR: gi|298370339|ref|ZP_06981655.1| periplasmic protein [Neisseria sp. oral taxon 014 str. F0314] # 1 203 1 203 203 197 100.0 4e-49 MPVSRKPTPQPFQLKPKHLVTAVLSVCAAAIVAVIVGVVGTFNSHDKARPIEAQPKDETG TGRVEVLKPEGSGAVPAGGIVINPNAGGQHPTGITDDRMVPPAPINNGSPAAADSDSARQ QPAPRSNASETDAGPNQPAAAKQDKPDNQAVTPPPPPQNEQPEPETRKEPPKPEPEPPAE TKPAPEQAKPQSQQQKEEMDELF >gi|289656332|gb|ADEA01000035.1| GENE 8 7959 - 8567 942 202 aa, chain - ## HITS:1 COG:NMB2091 KEGG:ns NR:ns ## COG: NMB2091 COG2823 # Protein_GI_number: 15677911 # Func_class: R General function prediction only # Function: Predicted periplasmic or secreted lipoprotein # Organism: Neisseria meningitidis MC58 # 1 201 1 201 202 267 73.0 1e-71 MKIKHYVKPVLTAAVLSLTLSGCVGAVLGGAAVGGKSLADRRTTGAQADDSVMSVRVENT IRSYLRQNNQVTGYTPKISVVGYNRHLLLLGQVATEEEKKFAEQVARSEQAAQGVYNYIN VAPQPRTFGDVAADSWGTSKVRTYLLGLKPATQSRVKIVTYDNVTYIMGILTPEEQEQVT RKVSTTYGVQKVVTLYQNYVKP >gi|289656332|gb|ADEA01000035.1| GENE 9 8642 - 9235 906 197 aa, chain - ## HITS:1 COG:NMA0340 KEGG:ns NR:ns ## COG: NMA0340 COG0279 # Protein_GI_number: 15793350 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoheptose isomerase # Organism: Neisseria meningitidis Z2491 # 1 197 1 197 197 333 88.0 1e-91 MTTLQERVAAHFAESIKAKQQAAEVLVEPTAQAAELLLACLMNDGRFLICGNGGSAADAQ HFAAEMTGRFEKERMELAAIALTTDTSALTAIGNDYGFEHIFSKQVRALGRAGDVLVGIS TSGNSANVIEAIKAAHERDMRVIALTGRDGGKIAAMLQDSDILLNVPYPRTARIQENHIL LIHAICDCIDTMLLEGM >gi|289656332|gb|ADEA01000035.1| GENE 10 9243 - 9590 229 115 aa, chain - ## HITS:1 COG:NMA0341 KEGG:ns NR:ns ## COG: NMA0341 COG0792 # Protein_GI_number: 15793351 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease distantly related to archaeal Holliday junction resolvase # Organism: Neisseria meningitidis Z2491 # 1 115 1 115 115 192 76.0 2e-49 MRLNHKQGAAGEDAALAFLQGRGCRLVERNWHCAFGEIDLIVKNGNTILFVEVKYRKNGG FGGAAYSITPSKLAKLRKTAEHYLQQHGLSHAPCRLDAVLIQGENPPEWVQNITG >gi|289656332|gb|ADEA01000035.1| GENE 11 9687 - 10574 1155 295 aa, chain + ## HITS:1 COG:NMB2088 KEGG:ns NR:ns ## COG: NMB2088 COG0313 # Protein_GI_number: 15677908 # Func_class: R General function prediction only # Function: Predicted methyltransferases # Organism: Neisseria meningitidis MC58 # 1 291 1 291 291 451 81.0 1e-127 MIQKQLQKACGSIMPKTLYVVATPIGNLADITLRALAVLQNADLICAEDTRVTARLLSAY GIQGRLVSVREHNERQMADKIIAHLSDGLTVAQVSDAGTPAVCDPGAKLAGRVREAGFRV VPVVGASAVMGALSAAGVTESDFYFNGFLPPKSGERQKLLAKWAQADFPVVMFETPHRIE AALSDMAALFPERRLTLAREITKTFETFLSGTVSEIQTALQADNDQIRGEMVLILHPARR EKHDGLPEAAQHIMNILAAELPTKQAAELAAKITGESKKALYDLALTRKDKGKAV >gi|289656332|gb|ADEA01000035.1| GENE 12 10600 - 10968 663 122 aa, chain + ## HITS:1 COG:SA0230 KEGG:ns NR:ns ## COG: SA0230 COG3189 # Protein_GI_number: 15925941 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Staphylococcus aureus N315 # 4 115 5 116 118 85 39.0 2e-17 MFTVQRIYDYRPAAGQTAVFIDRLYPRGVTKEKFAAAEWLKDIAPSAELRRWYHEDPAQH FAAFATRYHEELQGETQQKAVAHLLELEKQHGAVLILTAVKNPQQSHVSVLAQYLGIPFV YR >gi|289656332|gb|ADEA01000035.1| GENE 13 11675 - 12115 421 146 aa, chain - ## HITS:1 COG:NMB0018 KEGG:ns NR:ns ## COG: NMB0018 COG4969 # Protein_GI_number: 15675966 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, major pilin PilA # Organism: Neisseria meningitidis MC58 # 5 138 7 139 170 80 39.0 1e-15 MNANGFTIIELMIVVALIGIISALALPLFGNYSARAQASEGQSLLAGLKSPLVEAIAAEG IGACDTSKPWFTNSVSQGHYVNDVAVQKNTTQCLLTVTFKSANVNDKIIGKKINIRYTTG SGVWECGTDLPSDIAPSSCPGTLLTL >gi|289656332|gb|ADEA01000035.1| GENE 14 12230 - 12694 529 154 aa, chain - ## HITS:1 COG:NMA0264 KEGG:ns NR:ns ## COG: NMA0264 COG4969 # Protein_GI_number: 15793282 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, major pilin PilA # Organism: Neisseria meningitidis Z2491 # 1 144 1 134 170 79 40.0 2e-15 MKAMQKGFTLIELMIVVAIIGILAAIALPMYGDYTARAQATEGYELLGGLKTPLVEAVAA SSNAVACKGTTGANDNQPWFQSAVTTGKYVDNVVAAVDGSNCGLTATFKAASAGVNDKVA GHKIVMTLNPSDGKWTCKSDLDKNVSPAACRDAI >gi|289656332|gb|ADEA01000035.1| GENE 15 13386 - 14105 1242 239 aa, chain - ## HITS:1 COG:NMA0326 KEGG:ns NR:ns ## COG: NMA0326 COG0528 # Protein_GI_number: 15793338 # Func_class: F Nucleotide transport and metabolism # Function: Uridylate kinase # Organism: Neisseria meningitidis Z2491 # 1 239 1 239 239 419 97.0 1e-117 MTQQIKYKRVLLKLSGESLMGSDPFGINHDTIVQTVGEIAEVVKMGVQVGIVVGGGNIFR GVSAQAGSMDRATADYMGMMATVMNALALKDAFETLGIKARVQSALSMQQIAETYARPKA IQYLEEGKVVIFAAGTGNPFFTTDTAAALRGAEMNCDVMLKATNVDGVYTADPKKDPSAT RYETITFDEALNKNLKVMDATAFALCRERKLNIVVFGIAKQGSLKRVVIGENEGTLVHC >gi|289656332|gb|ADEA01000035.1| GENE 16 14376 - 15230 695 284 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts [Haemophilus influenzae R2866] # 1 279 1 276 283 272 53 5e-72 MAEITAKMVADLRAATGLGMMECKKALVEAEGNFEKAEEILRIKSGAKAGKLAGRTAAEG VLAYAINGNVGALVEVNCETDFVAKDAGFVEFANFVAKTAAEKKPATVEELSELVEAERK AIIAKLGENMSVRRFQVIDTANQLVAYIHGALATEGVLVEFKGSEDVARKIGMHIVAAKP QCVTEAEVDAETIEKERHIYTEQAIASGKPADIAAKMVEGRIRKFLAEITLNGQAFVMNP DQTVAQFAKENGTEVVSFVRYKVGDGIEKAVVDYAAEVAAAAKV >gi|289656332|gb|ADEA01000035.1| GENE 17 15354 - 16082 1201 242 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|121635755|ref|YP_976000.1| 30S ribosomal protein S2 [Neisseria meningitidis FAM18] # 1 242 1 242 242 467 97 1e-130 MSQITMRQMIEAGVHFGHQTRFWNPKMEQYIFGARNKIHIVNLEKTLPMFLEAQEAVRRL VANKGTVLFVGTKRQAREIIREEATRAGMPFVDHRWLGGMLTNYKTVKQSIKRLEEKTAA LENAAESGFGKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLG IPVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEGKNQALQETVAAAQEAA AE >gi|289656332|gb|ADEA01000035.1| GENE 18 16255 - 16461 317 68 aa, chain - ## HITS:1 COG:no KEGG:NGK_2266 NR:ns ## KEGG: NGK_2266 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 1 54 1 54 77 86 87.0 3e-16 MWHIVAIGYLFVAVMYSAAQPSIARALIYLVFWAVLPSLFTVFAVRIRRRNKRMKQEEAA PPPPAADE >gi|289656332|gb|ADEA01000035.1| GENE 19 16527 - 17144 646 205 aa, chain + ## HITS:1 COG:NMB2099 KEGG:ns NR:ns ## COG: NMB2099 COG0212 # Protein_GI_number: 15677919 # Func_class: H Coenzyme transport and metabolism # Function: 5-formyltetrahydrofolate cyclo-ligase # Organism: Neisseria meningitidis MC58 # 1 193 1 193 193 275 80.0 6e-74 MGNQEKSELRRRLHRARAQLAGDERAAAEREIGRLLKRRIKRGCRIGVYWPMGSELRLDG FVRAAQKRGAKLYLPYIEPRSRRMWFTPYPADGVKQERKRGRAKLHVPQFAGRKIRVHGL SILLVPIVGIDREGYRLGQAGGYYDATLSAMKYRLQAKTIGVGFACQLVDRLPHEAHDVP LDGFVSERGALAFRRFRRPVRRRTS >gi|289656332|gb|ADEA01000035.1| GENE 20 17141 - 17731 394 196 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|226870331|ref|ZP_03819946.1| acetyltransferase, ribosomal protein N-acetylase [Actinosynnema mirum DSM 43827] # 1 191 1 193 193 156 45 4e-37 MTGFNDKPTLSFNRVRLEPLTLQHEDGLREAVCDGRLWELAVTSAPAPDQVAAYIQTASA TRTAFAVIDERSGKVVGSTSLYHIDEAVPRVEIGFTWYAQSVQRTHVNTSCKLMLLTYAF ETLGCVCVGWRTDILNTASQRAIERLGAQKDGILRRHQIRKDGSVRDTVMYSMLREEWPA AQAALRKRLEQGTEAR >gi|289656332|gb|ADEA01000035.1| GENE 21 17928 - 19400 2199 490 aa, chain + ## HITS:1 COG:NMA0333 KEGG:ns NR:ns ## COG: NMA0333 COG0579 # Protein_GI_number: 15793344 # Func_class: R General function prediction only # Function: Predicted dehydrogenase # Organism: Neisseria meningitidis Z2491 # 1 488 1 488 488 835 79.0 0 MTEATDVILVGGGIMSATLGVLLKELEPSWEIVLIERLDEIAQESSNPWNNAGTGHSALC ELNYAPLGADGKVHPERALNIAEQFQLSRQFWASLVSEGKLADNSFINTVPHMSLVMCQD HCDYLQKRFDAFRSQKLFEKMEFSTDRARIGEWAPLTVEGRSEGQPLAATYAAEGTDVDF GNLTRQMVKYLKSKGVKLKCGLHVESVDRESDGAWAVKTTATSDPKQRLTLRSRFVFLGA GGGALTLLQKSGIPEGRGYGGFPVSGLFFRNHNPETAQRHNAKVYGQASVGAPPMSVPHL DTRHVDGQRYLMFGPYAGFKPNFLKQGSLMDLPQSIHLHNIYPMLRAGWDNMPLTKYLFG ELRKTKEERLASLLEYYPQADPDDWELITAGQRVQVIKKDSEKGGVLQFGTELVTHADGS LAALLGASPGASTAVPLMIRLLHECFPKRAASWQSRLKDLVPGYGVKLNDNPDLAEEILS HTAKVLGIHH >gi|289656332|gb|ADEA01000035.1| GENE 22 19746 - 19943 292 65 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKELNNYEIELVAGGVDWGEVGAGLGAVGLGVAIAATPVGWLGALGAAAFAGAGGYGIGD GLFNK >gi|289656332|gb|ADEA01000035.1| GENE 23 20055 - 20225 159 56 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298370355|ref|ZP_06981671.1| ## NR: gi|298370355|ref|ZP_06981671.1| hypothetical protein HMPREF9016_01692 [Neisseria sp. oral taxon 014 str. F0314] # 1 56 21 76 76 70 100.0 4e-11 MSIYLYILIFIIFLALVITVGIHKKWIKTEQQTNKRIFWIGIGIALASSVFAAIVG >gi|289656332|gb|ADEA01000035.1| GENE 24 20506 - 21771 1661 421 aa, chain - ## HITS:1 COG:NMA0261 KEGG:ns NR:ns ## COG: NMA0261 COG1519 # Protein_GI_number: 15793279 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: 3-deoxy-D-manno-octulosonic-acid transferase # Organism: Neisseria meningitidis Z2491 # 4 418 3 417 423 574 67.0 1e-163 MINRWFYTRLWQFAPPLIRRYLKKRGRKSPAYLENWGERFGEPLSDPVQRPVWIHAVSVG ETRAAQPLAEALRRHFPDAPLLLTQMTPTGRAAAQELFPDAQCRYLPYDRPEWVRQFLRE HNPLFGVLMETEIWPNLMHGCAEEGVPLFLANARLSEKSQRGYLKVRGLVEPAMQTLSGC FAQTAADAERLHLIGASNVHVCGNTKYDISPPDKMRALAAGFAERIGRRPVAVCASTRFY RGEDETELLLSAWRQYRGDALLVVVPRHPERFQTAYDTARSLGFRVQKRSDNAMVSPQTQ VWIGDSMGELFAYYLTGSAAFVGGSLVDTGCQNIIEPIACGVPTVFGFSTYNFSSACENA LKAGAAVQVGSADEWRQTVETWLSDDSLRARFAAQAQAFVAQHRGASSRMAQEVAKAVQA V >gi|289656332|gb|ADEA01000035.1| GENE 25 21878 - 23023 1662 381 aa, chain - ## HITS:1 COG:NMA0079 KEGG:ns NR:ns ## COG: NMA0079 COG1289 # Protein_GI_number: 15793108 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis Z2491 # 9 372 9 372 375 536 78.0 1e-152 MKLPLHIPFAERWLNAYERYRYSRLIHAVRLGMAVLFATAVARVFHLKHGEWIGMTVFVV LGMLQFQGAIYSKAVERMLGTVIGLGAGLAVLWLNQHYFHGGLPFYLTVGAASAAAGWAA VGKNGYIPMLAGLTMCMLIGDNGTEWLDSGLMRAFNVLLGAVIAIGAAKLLPLKSTLMWR FMLADNLTACSRILAEVGNGRRMTRERLEQNMIKMRQINARMVKSRSHLAATSGESHISP AMMEAMQHAHRKIVNSTELLLNTAAKLSPPDVSAEERSLLDSHFQRLQRDLRLTARLLKG HYARRVRIDTDINPRLGRLAQHLPFEWQGFLWLGTNMRMEVAALAILLQRTRRRWLDTRE LQRLRAHLMERRANVSDDGAV >gi|289656332|gb|ADEA01000035.1| GENE 26 23169 - 24503 972 444 aa, chain - ## HITS:1 COG:NMA2198 KEGG:ns NR:ns ## COG: NMA2198 COG0415 # Protein_GI_number: 15795067 # Func_class: L Replication, recombination and repair # Function: Deoxyribodipyrimidine photolyase # Organism: Neisseria meningitidis Z2491 # 4 426 17 425 433 305 44.0 1e-82 MQKNTLVWFRRNLRLTDNAALAAAVRRGLPVAGVFAADAANPRQAAFLRASAAELHRALA ERGIPLFVAQEAETDIPRLAAELDAAVVVADEGCMADETARDNRIWRVLDAQGRAFERVN DGAAFARAEIMDEHGRPYFEFAPYRQAWLRAFAQRFADRRPSESLPVGFQTAFGILPPFP ALPETAPQEWRQQGGEAAGRRQWARFAADIGNYPLMSGFPAKKGTGRVGAYLAAGCLSPR ELAQAAAKRGAAQWLDNLVRRDFFRQVMFHRPEAAAEALRPEYRGIKWPGGQDVLSRWQQ GQTGFPLIDAAMRSLNATGWLHPALRAAAAAFLCRILLADWRHGAAWFARCLTDYDPASN TGNWQEAAGVFGLFSGGAANPVLQAQQLDPDGTFIRRYVPELAHLPKDVVHAPWLARASV DTHGYPPPMADCARQGRAYAALFR >gi|289656332|gb|ADEA01000035.1| GENE 27 24781 - 25212 255 143 aa, chain + ## HITS:1 COG:no KEGG:AOLE_09360 NR:ns ## KEGG: AOLE_09360 # Name: not_defined # Def: hypothetical protein # Organism: Acinetobacter_DR1 # Pathway: not_defined # 10 136 12 141 147 99 36.0 4e-20 MNLKIIPCLLFLSACTAVNVQPLTTEHPVQRICIVKNRAVTISDFVPTIQERLQYHGVLS TVVEDNSSLDCEYQLRYTARRSWDITPYLSQAELTLWYEGKQIAKANYHLRGKGGLSLVK WASVPSKMNPVIDALLGSQAIKK >gi|289656332|gb|ADEA01000035.1| GENE 28 25463 - 26590 2067 375 aa, chain - ## HITS:1 COG:RSc2819 KEGG:ns NR:ns ## COG: RSc2819 COG0263 # Protein_GI_number: 17547538 # Func_class: E Amino acid transport and metabolism # Function: Glutamate 5-kinase # Organism: Ralstonia solanacearum # 1 371 1 371 374 392 61.0 1e-109 MSLQQNLSNIRTLVVKVGSSLVTAGGKGIDQAALDRWAAQIAELGKQGVQTVLVSSGAIA EGIKRLGWSKRPTAINELQAAAAVGQTGIAQAYEAAFAPHGIRTAQILLTHDDLSNRTRY LNARSTLQTLLSKGIVPVINENDTVTTDEIKLGDNDTLGALVTNLIEADALVLLTDQKGL YDSDPRKNPQAKLIPTIAADHPDLESMAGGAGSSVGTGGMYTKVTAAKRAALSGAATVVA WGGEPDVLVRLKQGESIGTLFTSAHSRVAARKQWLLGHVQTAGSLTVDSGAAKALTEQHA SLLPVGCIRADGHFHRGELVAILDTDGKEIARGLTNYSSGETAKILQTPSERIAEKLGYA HEDELIHRDNMASHW >gi|289656332|gb|ADEA01000035.1| GENE 29 26645 - 26944 499 99 aa, chain - ## HITS:1 COG:no KEGG:NMCC_1886 NR:ns ## KEGG: NMCC_1886 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_053442 # Pathway: not_defined # 1 99 32 130 130 160 88.0 1e-38 MTASMYILLVLALIFANAPFVTTKFFGVFPLKRKHFGHHLVELAAGFILTAVLAYILESR AGAVQHQDWEFYATVVCLYLIFAFPCFVWRYFWHARNRE >gi|289656332|gb|ADEA01000035.1| GENE 30 27275 - 28750 2099 491 aa, chain - ## HITS:1 COG:NMB0259 KEGG:ns NR:ns ## COG: NMB0259 COG1007 # Protein_GI_number: 15676183 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 2 (chain N) # Organism: Neisseria meningitidis MC58 # 1 491 1 480 480 641 81.0 0 MNLIDLNLMPAMPEIVLFALLITVLLADLWISDENRYLTHLMSLGTVIIVAVTQLAVWEQ GSTLAFHGMYIADGMSRLSKLVLYGLTFGLFIYSKPYNQARGIFKGEFYTLSLFALLGMS VMVSAAHFLTAYIGLELLSLSLYAMIALRRDSGRSAEAALKYFVLGALASGLLLYGISMV YGATGSLEFATVLASSYSELANEWLLKLGLVFIVVAVAFKLGAVPFHMWVPDVYHGAPTS VAAFVGTAPKIAAVVFAFRILVTGLGTVHHDWSQMFAVLAVASLLIGNLAAIMQANIKRM LAYSTISHMGFILLAFMAGAVGFAAGLYYAITYALMAAVGFGILMVLSTDNIECEEIKDL AGLNQRHAWFAFLMLLAMFSMAGIPPLMGFYAKFGVIKALLSASTAQNAAMAGSTYIVLA VFAVVMSLIGAFYYLRVVKVMYFDEATHDQPVGSNYAAKFFLSVNAFLLILWGIMPQTVI DWCARALENTL >gi|289656332|gb|ADEA01000035.1| GENE 31 28760 - 30256 2262 498 aa, chain - ## HITS:1 COG:NMB0258 KEGG:ns NR:ns ## COG: NMB0258 COG1008 # Protein_GI_number: 15676182 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 4 (chain M) # Organism: Neisseria meningitidis MC58 # 1 498 1 498 498 817 93.0 0 MFSNYLLSLAIWIPIAAGVLVLATGPDSRAPLARVLALIGALAGFLVTLPLFTGFDRLSG GYQFTEFHEWIPLLRINYSLGVDGISVLFVILNAFITLMVVLAGWEVIQKRPAQYMAAFL IMSGLINGAFSARDALLFYVFFEGMLIPLYLIIGVWGGPRRVYASVKLFLYTLMGSLLML VAIVYLSYQAGGFSIEDFQNIKQIPLGVQQLLFVAFFLSFAVKVPMFPVHTWLPDAHVEA PTGGSMVLAAITLKLGAYGFLRFILPILPDASRYFAPVIIVLSLIAVVYIGMVALVQTDM KKLVAYSSISHMGFVTLGMFLFINGQLNDWALKGAVIQMISHGFVSAAMFMCIGVMYDRL HTRNIADYGGVANVMPKFAAFMMLFAMANAGLPATSGFVGEFMVIMGAVKVNFWVGALAA LTLIYGASYTLWMYKRVIFGAVGNPHVADMKDINCREFAILAILAVAVLGMGLYPQAFIE VVHQAANDLIAHVAQSKI >gi|289656332|gb|ADEA01000035.1| GENE 32 30478 - 31626 563 382 aa, chain - ## HITS:1 COG:no KEGG:NMO_1781 NR:ns ## KEGG: NMO_1781 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 1 381 1 379 387 616 82.0 1e-175 MTQLFLHSDTSNDKALISIYEKAVSEAVELYIFSAYLTHWDVKNKLNSKLQEFKFIFGQD FGLSKKEAIRKVLKWLPSHLKFTLMVAQGIQGFHPKAVFWKNDKNEYYALIGSSNLTHAA FNSNYEANILTKISEQDFIKVKSWANEIAMKSIPVSEDWLKGYKEAEISYKKSASSRSAI DGLSLKIPPYNHELIKARREQMRKHQTVREELKNLINQCASGKIGNDDFYVEFNKLWSWE NENKGKGIGNRFQDKTWTRKGKSSDFRKLCCVIQAVFDAPSADKDSVVAKQIDWLKECGV STRRSVFSEMLCQEYPDKYPLLNEPVEKFLRDKDNKFRSAHGASEGSKYIDLSMKLRAVL VKQSKIKNLAELDVLIQDKYRK >gi|289656332|gb|ADEA01000035.1| GENE 33 31684 - 32004 434 106 aa, chain - ## HITS:1 COG:NMA0001 KEGG:ns NR:ns ## COG: NMA0001 COG0662 # Protein_GI_number: 15793035 # Func_class: G Carbohydrate transport and metabolism # Function: Mannose-6-phosphate isomerase # Organism: Neisseria meningitidis Z2491 # 1 106 1 106 106 190 90.0 6e-49 MPDTHTIRSAEFTASRAWGALNIANMNGTIVRLHWTDQPYKWHVNDGEEVFAVMDGEVDM HYRENGEEHIVRLISGDIFYAGIGTEHVAHPCGEARILVIEKEGSV >gi|289656332|gb|ADEA01000035.1| GENE 34 32207 - 32533 341 108 aa, chain - ## HITS:1 COG:no KEGG:STER_1555 NR:ns ## KEGG: STER_1555 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:ste00400]; Metabolic pathways [PATH:ste01100]; Biosynthesis of secondary metabolites [PATH:ste01110] # 10 97 4 91 93 93 61.0 2e-18 MVEDKLPQTLDEVREAIDGLDKELIELLARRQKLVRQAGRLKPKNDVQAVSAPERVAQVI ASRRAYAQKVGLSPEVAEAVWRSMIDAFIKLEMETNRVDGGSQHFGHN >gi|289656332|gb|ADEA01000035.1| GENE 35 32588 - 34612 3123 674 aa, chain - ## HITS:1 COG:NMB0257 KEGG:ns NR:ns ## COG: NMB0257 COG1009 # Protein_GI_number: 15676181 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit # Organism: Neisseria meningitidis MC58 # 1 674 1 674 674 1221 98.0 0 MNDMTLYLIIALVPLAGSLIAGLFGNKIGRAGAHTVTILGVAVSAVLSAYVLWGFIDGSR AKFDENVYTWLTMGGLDFSVGFLVDTMTAMMMVVVTGVSLMVHIYTIGYMHDEKVGYQRF FSYISLFTFSMLMLIMSNNFVQLFFGWEAVGLVSYLLIGFYFKRPSAIFANLKAFLINRV GDFGFLLGIGLVLAYFGGSLRYQDVFAYLPNVQNATIQLFPGVEWSLITVTCLLLFVGAM GKSAQFPLHVWLPDSMEGPTPISALIHAATMVTAGLFMVSRMSPIYEMSSTALSVIMVIG AITALFMGFLGVIQNDIKRVVAYSTLSQLGYMTVALGASAYSVAMFHVMTHAFFKALLFL AAGSAIIGMHHDQDMRHMGNLKKYMPITWLTMLIGNLSLIGTPFFSGFYSKDSIIEAAKY STLPGSGFAYFAVLASVFVTAFYAFRQYFMVFHGEEKWRSLPEHHSDDHGEEHHGLGKND NPHESPLVVTLPLILLAIPSVIIGYIAIEPMLYGDFFKDVIFVNADAHPTMHIMKEEFHG ALAMVSHSLHSPVLYLAIAGVLSAWLLYVKLPHLPAKIAQAFRPVYVLFENKYYLDALYF NVFAKGTRALGNFFWKVGDTAIIDNGIVNGSAKLVGAIAAQVRKAQTGFIYTYAAAMVFG VLVLLGMTFWGLFR >gi|289656332|gb|ADEA01000035.1| GENE 36 34817 - 35362 791 181 aa, chain - ## HITS:1 COG:NMA0004 KEGG:ns NR:ns ## COG: NMA0004 COG2184 # Protein_GI_number: 15793038 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Protein involved in cell division # Organism: Neisseria meningitidis Z2491 # 1 181 11 191 191 346 96.0 2e-95 MKSIDEQSLHNACRLFESGDIDSIEVGTTAGQQQIHCYLFGGLYDFAGQIREDNISKGGF RFANAMYLKEALAKIEQMPERTFEEIIAKYVEMNIAHPFLEGNGRSTRIWLDLVLKKNLK KVVNWQNVSKTLYLQAMERSPVNDLELRFLLKDNLTDDVDNREIIFKGIDQSYYYEGYEK G >gi|289656332|gb|ADEA01000035.1| GENE 37 35429 - 35734 542 101 aa, chain - ## HITS:1 COG:NMA0005 KEGG:ns NR:ns ## COG: NMA0005 COG0713 # Protein_GI_number: 15793039 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) # Organism: Neisseria meningitidis Z2491 # 1 101 1 101 101 146 100.0 1e-35 MITLTHYLVLGALLFGISAMGIFMNRKNVLVLLMSIELMLLAVNFNFIAFSQHLGDTAGQ IFVFFVLTVAAAESAIGLAIMVLVYRNRQTINVADLDELKG >gi|289656332|gb|ADEA01000035.1| GENE 38 35731 - 36402 839 223 aa, chain - ## HITS:1 COG:NMA0006 KEGG:ns NR:ns ## COG: NMA0006 COG0839 # Protein_GI_number: 15793040 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 6 (chain J) # Organism: Neisseria meningitidis Z2491 # 1 223 1 223 223 357 94.0 7e-99 MTFSAILFYILAAIVLYGALRTVTAKNPVHAALHLVLTFCVSAMIWMLMQAEFLGVTLVV VYVGAVMVLFLFVVMMLNIDIEEMRAGFWRHAPVAGVVGTLLAVALILILVNPKTDLAAF GLMKDIPADYNNIRDLGSRIYTDYLLPFELASVLLLLGMVAAIALVHRKTFNPKRMDPAD QVKVRADQGRMRLVKMEAVKPQTESAEENEVSDGLKPKEEGKA >gi|289656332|gb|ADEA01000035.1| GENE 39 36414 - 36893 661 159 aa, chain - ## HITS:1 COG:NMA0008 KEGG:ns NR:ns ## COG: NMA0008 COG1143 # Protein_GI_number: 15793042 # Func_class: C Energy production and conversion # Function: Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) # Organism: Neisseria meningitidis Z2491 # 1 159 1 159 159 317 100.0 7e-87 MANLVKTFLLGELVKGMGVTLKNFFARKDTIYFPEEKTPQSVRFRGLHAQRRYPNGEERC IACKLCEAVCPAMAINIESEEREDGTRRTKRYDIDLTKCIFCGFCEEACPTDAIVETHIF EYHGEKKGDLHMTKPILLAIGDKYEAEIAKRKAADAPYR >gi|289656332|gb|ADEA01000035.1| GENE 40 36952 - 37521 551 189 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298370372|ref|ZP_06981688.1| ## NR: gi|298370372|ref|ZP_06981688.1| hypothetical protein HMPREF9016_01709 [Neisseria sp. oral taxon 014 str. F0314] # 1 189 2 190 190 338 100.0 8e-92 MDERQLQQLIINISALHQELQKQSTEALSLQAQGIRRLEEGLSEVNRLVADEVSNQMAAV SGDLRRNIKKGSQEGLDDLRAEIDDVKKHMEDFAGFSAVAQNRLDAASRSVLLRIGYLAV AALVCVIGVSLWQGWYYGQVVREKKASVENLELFSQADIVKCGERLCAKTAKNTPAEYRK QGYVLIEFK >gi|289656332|gb|ADEA01000035.1| GENE 41 37594 - 38958 1061 454 aa, chain - ## HITS:1 COG:RSc0104 KEGG:ns NR:ns ## COG: RSc0104 COG2931 # Protein_GI_number: 17544823 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: RTX toxins and related Ca2+-binding proteins # Organism: Ralstonia solanacearum # 90 167 1 87 960 62 37.0 1e-09 MRPLTQQDIDRYKNDIKQNHIQGVVRTYSDLLSKGYNYAGWAKGVAEAEGMTWSSLPKGE TTGRAAVMFMKDSSEQTFSEQKLNRIREGMAEGYLDFLESQLGKLPRDVRFDEMRDFHKQ VFEKNGLSINNWTLETPMKLIGKYEGERRQEEIWQKLLATRGSGIGALTESAVLYQAVED YAQGHIYFNKRGERIGNTVAHSAEEDNDGIPVIMGDTLQVRRVSEADRMEAAKWIRNVSR FKPLLFSEAEQAQEMQYAAAAKQDDFLSATNDLITRLKSGDQAALSDFMGRDDVRQMQRE SAMTAQAFLSRNPGYGEEMLPNRFQRLEMEDMSDRFRNLYKDSREQLAGYYQEQGIRYRE EALDNTAAALAAAGCRSRMKCVSMISVADGQVNIGDESFPDFRTASVNARNASLTGMQES MESAQRTEREFEEQARQREMERMAQSHSRGMSIG >gi|289656332|gb|ADEA01000035.1| GENE 42 38955 - 39857 420 300 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298370374|ref|ZP_06981690.1| ## NR: gi|298370374|ref|ZP_06981690.1| hypothetical protein HMPREF9016_01711 [Neisseria sp. oral taxon 014 str. F0314] # 67 300 1 234 234 486 100.0 1e-136 MKIKKWLLGLCLLFGLATLSVCSFSDGLLIGKTQRELQDAVFSDKGRVEVPEDSYKIGTL GGRKVRMSSYQVQDVSYTDTPTAFSKDWETYKAPPRTYDSVLTGFDFYLNYETGVIRDIR HDDGFYDELKVSGTPWVFVGVGNNLHPLDKTPDQFDRLLATRLRTTNPPYRRYVRLPDEN LYGLEQYRVLGINPETGLLYRNEPGNNEDDIFINRSKDGHVLSYIACATNTDVPNPPCSH KFLFRKSGLDINFSLGYSRHRLYDWRKIEEQAGKAVLAFAEAADKDIEADAHRKTTGGKK >gi|289656332|gb|ADEA01000035.1| GENE 43 39921 - 40997 1755 358 aa, chain - ## HITS:1 COG:NMB0250 KEGG:ns NR:ns ## COG: NMB0250 COG1005 # Protein_GI_number: 15676174 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 1 (chain H) # Organism: Neisseria meningitidis MC58 # 1 358 1 358 358 590 99.0 1e-168 MQEWFQNLFAATLGLGDLGITVGLVVSVIVKIVIILIPLILTVAYLTYFERKVIGFMQLR VGPNVTGPWGLIQPFADVFKLLFKEVTRPKLSNKALFYIGPIMSLAPSFAAWAVIPFNEE WVLTNINIGLLYILMITSLSVYGVIIAGWASNSKYSFLGAMRASAQSISYEIAMSAALVC VVMVSGSMNFSDIVAAQAKGIAGGSVFSWNWLPLFPIFIVYLISAVAETNRAPFDVAEGE SEIVAGHHVEYSGFAFALFFLAEYIFMILIAALTSLMFLGGWLSPFPQSWGIVGTPSAFW MFVKMAAVLYWYLWIRATFPRYRYDQIMRLGWKVLIPIGFAYIVILGLWMISPLNLWK >gi|289656332|gb|ADEA01000035.1| GENE 44 41000 - 43261 2757 753 aa, chain - ## HITS:1 COG:NMA0010 KEGG:ns NR:ns ## COG: NMA0010 COG1034 # Protein_GI_number: 15793044 # Func_class: C Energy production and conversion # Function: NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) # Organism: Neisseria meningitidis Z2491 # 1 753 1 753 753 1461 97.0 0 MLQIEIDGKQVSVEQGATVIEAAHKLGTYIPHFCYHKKLSIAANCRMCLVDVEKAPKPLP ACATPVTDGMIVRTHSAKAREAQEGVMEFLLINHPLDCPTCDQGGECQLQDLAVGYGKTT SRYTEEKRSVVGKDMGPLVSAKEMSRCIHCTRCVRFTEEIAGLQEIAMANRGEHSEIMPF IGKAVETELSGNVIDLCPVGALTSKPFRFNARTWELNRRKSVSAHDALGSNLIVQTKDHT VRRVLPLENEAINECWLSDRDRFAYEGLYHESRLKNPKIKQGGEWMDVDWKTALEYVRSA IECIAKDGNQNQVGIWANPMNTVEELYLAKKLADGLGVKNFATRLRQQDKRLSDDLNGAQ WLGQSIESLADNEAVLVVGANLRKEQPLLTARLRRAAKERMALSVLASSKEELLMPLLSQ EAAHPDEWAGRLKNLSADAEHAITASLKNAEKAAVILGAEVQNHPDYAAIYAAAQELADA TGAVLGILPQAANSVGADVLGVNSGESVAEMANAPKQAVLLLNVEPEIDTADGAKAVAAL KQAKSVMAFTPFVSETLLDVCDVLLPIAPFTETSGSFINMEGRLQSFHGVVQGFGDSRPL WKVLRVLGNLFDLQGFEYHDTAAILKDALDAESLPSKLNNRAASTQKDFQTTSSRLVRVG GVGIYHTDAIVRRSAPLQETSHAAVPAARVNPNTLARLGLQDGQNAVAKQNGAGVSVMVK ADAGLPENVVHLPLHTENAALGALMDTIELAGA >gi|289656332|gb|ADEA01000035.1| GENE 45 43632 - 43988 202 118 aa, chain - ## HITS:1 COG:NMA0605 KEGG:ns NR:ns ## COG: NMA0605 COG2852 # Protein_GI_number: 15793595 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 4 112 9 117 129 125 56.0 1e-29 MRYSTRNTALKQNVCNLKQNMTLAEQKLWHHLRGKRLNGIKFRRQQTIGGYIVDFVSMEH RLIIELDGGQHSEQIEYDEQRTAFLNAQGYRVLRFWNNEVLQQTEAVLEKIIEMCGGT >gi|289656332|gb|ADEA01000035.1| GENE 46 44174 - 45469 1959 431 aa, chain - ## HITS:1 COG:NMB0246 KEGG:ns NR:ns ## COG: NMB0246 COG1894 # Protein_GI_number: 15676170 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit # Organism: Neisseria meningitidis MC58 # 1 430 1 430 433 875 97.0 0 MAIYQSGVIFDQVDTANPDCWTLDEYVKRGGYSALRRILSENISQTDVIDQVKTSGLRGR GGAGFPTGLKWSFMPRSFPGEKYVVCNTDEGEPGTFKDRDIIMFNPHALIEGMIIAGYAM GAKAGYNYIHGEIFEGYQRFEAALAQARAAGFLGKNILGSDFEFELFAHHGYGAYICGEE TALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFASVPFIVRDGGQAFADKGIPN AGGTKLFCISGHVERPGNYEVPLGTPFAEILKMAGGMRGGKKLKAVIPGGSSAPVLPADI MMQTNMDYDSISKAGSMLGSGAIIVMDEDVCMVKALERLSYFYYDESCGQCTPCREGTGW LYRIVHRIVEGKGRMEDLDLLDSVGNQMAGRTICALADAAVFPVRSFTKHFREEFVHYIE HGGPMKPNKWC >gi|289656332|gb|ADEA01000035.1| GENE 47 45558 - 46082 284 174 aa, chain - ## HITS:1 COG:no KEGG:ACL_0934 NR:ns ## KEGG: ACL_0934 # Name: not_defined # Def: hypothetical protein # Organism: A.laidlawii # Pathway: not_defined # 7 167 11 171 177 104 34.0 1e-21 MEYIIDIYETDELNKYRFALGSISEKTLFVFGINPSTADNKEPDSTIRKVMGFAEENGYT SFVMFNLYPQRATNPNDLPQEASKEIIQKNVEIISKLISQQVTSDILLAWGGLFYSRAYF SDCLKQLYENLKQYPVNWLRIGEFLKSGQPQHPLYAAYSNQLKKMDMLNFLEKI >gi|289656332|gb|ADEA01000035.1| GENE 48 46109 - 46582 748 157 aa, chain - ## HITS:1 COG:NMB0245 KEGG:ns NR:ns ## COG: NMB0245 COG1905 # Protein_GI_number: 15676169 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase 24 kD subunit # Organism: Neisseria meningitidis MC58 # 1 157 1 157 157 305 97.0 2e-83 MLSAESLKQIDIELAKYPADQRRSAIMGALRIAQTEKGWLAPETIAFVADYIGITPAQAY EVATFYNMYNLEPVGKYKLTVCTNLPCALRGGMDTGEYLKKKLGIGYGETTPDGKFTLVE GECMGACGDAPVMLVNNHSMCSFMTEEAIEKKLAELK >gi|289656332|gb|ADEA01000035.1| GENE 49 46582 - 47838 1863 418 aa, chain - ## HITS:1 COG:NMA0016 KEGG:ns NR:ns ## COG: NMA0016 COG0649 # Protein_GI_number: 15793050 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase 49 kD subunit 7 # Organism: Neisseria meningitidis Z2491 # 1 418 1 418 418 861 98.0 0 MANKLRNYTINFGPQHPAAHGVLRMILELEGETIVRADPHIGLLHRGTEKLAETKTYLQA LPYMDRLDYVSMMVNEQAYCLAVEKLARIDVPIRAQYIRVMFAEVTRILNHLMGIGSHAF DIGAMTAILYAFRDREELMDLYEAVSGARMHAAYFRPGGVYRDLPDFMPKYESSKFRNAK VLKQLNESREGTMLDFIDAFCERFPKNIDTLETLLTDNRIWKQRTVGIGVVSPERAMQKG FTGVMLRGSGVEWDVRKKQPYEVYDQMDFDIPVGVNGDCYDRYLCRMEEMRQSVRIIKQC ADWLRVNPGPVITTNHKFAPPKRTEMKTGMEDLIHHFKLFTEGMHVPEGETYTAVEHPKG EFGVYIISDGANKPYRLKIRAPGFAHLQGMDEMAKGHMLADVVAIIGTQDIVFGEVDR >gi|289656332|gb|ADEA01000035.1| GENE 50 47828 - 48421 886 197 aa, chain - ## HITS:1 COG:NMB0243 KEGG:ns NR:ns ## COG: NMB0243 COG0852 # Protein_GI_number: 15676167 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase 27 kD subunit # Organism: Neisseria meningitidis MC58 # 1 197 1 197 197 387 95.0 1e-108 MASIQNLYDTVSRVLGNQASKVISALGEITVECLPEHYVSVMTTLRDHEELHFELLVDLC GVDYSTYKNEAWQGKRFAVVSQLLSVKNNQRIRVRVWVSDDDFPVVESVVPVYNSADWYE REAFDLYGIMFNNHPDLRRILTDYGFVGHPFRKDFPISGYVEMRYDEEQKRVIYQPVTIE PREITPRIVREENYGGQ >gi|289656332|gb|ADEA01000035.1| GENE 51 48433 - 48915 457 160 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|154175216|ref|YP_001407461.1| NADH dehydrogenase subunit B [Campylobacter curvus 525.92] # 12 154 17 158 170 180 56 2e-44 MGIEGVLKKGFITTSADTVLNYMRTGSLWPVTFGLACCAVEMMHAGMARYDLDRFGIIFR PSPRQADLMIVAGTLTNKMAPALRRVYDQLAEPRWVLSMGSCANGGGYYHYSYSVVRGAD RVVPVDVYVPGCPPTAEALIYGLMQLQQKIKRTSTIARDE >gi|289656332|gb|ADEA01000035.1| GENE 52 48906 - 49262 238 118 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|154175415|ref|YP_001407462.1| NADH dehydrogenase subunit A [Campylobacter curvus 525.92] # 1 118 6 126 129 96 38 5e-19 MLASYFPVLVFILVGLAAGVLFILLGTILGPKHHYAEKDAAYECGFEAFENARMKFDVRY YLVAILFILFDLEVAFMLPWAVVFKDLGAYGFWSMLVFIVVLTVGFVYEWKKGALEWE >gi|289656332|gb|ADEA01000035.1| GENE 53 49628 - 50359 926 243 aa, chain - ## HITS:1 COG:RSc2231 KEGG:ns NR:ns ## COG: RSc2231 COG1611 # Protein_GI_number: 17546950 # Func_class: R General function prediction only # Function: Predicted Rossmann fold nucleotide-binding protein # Organism: Ralstonia solanacearum # 12 227 86 302 317 258 58.0 5e-69 MSLLKKLPKPMLPDETRREIQARESYHVLKIISEFVEAGEELRAIQPAVSIYGSARTPEN HPDYEFTLRLARKLSDAGFSVISGGGPGIMEAANKGAFAGASPAVGLNIVLPHEQKANPY QDLSIKFQHFFPRKVMFVKHAVAYVVMPGGFGTLDELFESLTLVQTGKTPNRPIILVGRD FWSGLLDWIRKELLGRGLIAAADMDLIRLIDDEDEIIEEIFAHYENRLETLGELGADTWS LGL >gi|289656332|gb|ADEA01000035.1| GENE 54 50454 - 50894 567 146 aa, chain - ## HITS:1 COG:no KEGG:Aave_2582 NR:ns ## KEGG: Aave_2582 # Name: not_defined # Def: hypothetical protein # Organism: A.avenae # Pathway: not_defined # 1 146 35 181 233 84 35.0 2e-15 MFAHFALAAAVLTKVLHVDFLLLKNYAVPLDKDLVDKIGKAKQIALWGLAGLIVTGAALV VYGMVTSQGYLNNPKLWVKFICVAVLTANGYLVHLLGRHVKEQTVLADFSYGISVLISIV GAVSSASWIFACWLGIARAWNKVMPF >gi|289656332|gb|ADEA01000035.1| GENE 55 51046 - 52908 2673 620 aa, chain + ## HITS:1 COG:NMA2205 KEGG:ns NR:ns ## COG: NMA2205 COG0557 # Protein_GI_number: 15795074 # Func_class: K Transcription # Function: Exoribonuclease R # Organism: Neisseria meningitidis Z2491 # 1 617 10 626 635 1145 93.0 0 MNIFYEESGQFKVAAIVQKNDATYQVDTQHGKRTKVKANNVFTEFDGDMAAFLENAQAQA ADIDTDLLWEVCGEEEFSAEAIAEEYYGHAPTKTELAATLIALYAAPMYFYKKAKGVFKA APEETLKQALAAIERKKQQDAQIDAWAEALKRGEMPSEIAADLKTILHAPDKQSLTYKAF TKAADALKTSAYELAKKTGGITSIPQYLQDGFEIKYFPKGTGFPDLPLPEMPDLPKADVT AFSIDDESTTEVDDALSLTDLGNGMKRVGIHIAAPSLAVAQGDKMEKNIMERLSTVYFPG GKITMLPENWIAAFSLDAGAYRPAVSIYFDVDGEFNVGEPTCKIEAVNIAENLRIQTIEP HFNAETGLDKAGEMMFAHHQDLIWFHQFAVALQKARGKYEPDRAPQYDYSIELDEEGKVS VVRRERGSPIDMLVSEMMILANSTWAQMLHDNDLPGLFRVQPAGKVRMSTKSEPHIGMGV QHYGWFTSPLRRAADYINQKQLLSLIDDSAEPLFRQSDAELFAALRDFDTAYAAYADFQR QMEAYWSLVYLQQQGASELTATILREDLVRIEGLPLVTRATGIPFDALPKSQVLLKITEL DPEKQFIALNYVKAVAPPAP >gi|289656332|gb|ADEA01000035.1| GENE 56 53011 - 53343 573 110 aa, chain + ## HITS:1 COG:no KEGG:DP2299 NR:ns ## KEGG: DP2299 # Name: not_defined # Def: hypothetical protein # Organism: D.psychrophila # Pathway: not_defined # 8 109 9 110 110 94 54.0 8e-19 MTSEQQNDILCINQVQLLLAEKRTALAIMRTGIAVLALPLSIFSALIATSKWYNVLEVWP LLVLVSLINLGLIAFAVYLIARSLMKMHQYDRIIIDIKQNHSSLRQLIQS >gi|289656332|gb|ADEA01000035.1| GENE 57 53493 - 54275 1099 260 aa, chain - ## HITS:1 COG:NMB0296 KEGG:ns NR:ns ## COG: NMB0296 COG4137 # Protein_GI_number: 15676218 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Neisseria meningitidis MC58 # 4 260 12 268 268 323 75.0 2e-88 MLTYAGLGAFVWQRHRKYGNKAYPLKAELAVLGVALLVHGAALLMPVLRDNVLITGFGYS VSLIVWLMLMMYCLGSFFYCLRGLQLLLYPCATVALLLGWVFPGKFVGYQINDLPFMLHI VSSLLAYGLFGIVTLFAVLILLLNRNLHRRRASALSNFLPPLLSLEKLMFRGMLAGFVLL TYSVVSGTFFAESVFGKPLTFTHKTMFGILSWLIYGGLLLKHSMTAWRGKKAAVWTIIGF VSLLLAYVGSKFVLEIVLHR >gi|289656332|gb|ADEA01000035.1| GENE 58 54437 - 55807 2234 456 aa, chain + ## HITS:1 COG:NMB0295 KEGG:ns NR:ns ## COG: NMB0295 COG0541 # Protein_GI_number: 15676217 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal recognition particle GTPase # Organism: Neisseria meningitidis MC58 # 1 456 1 456 456 774 93.0 0 MLDNLTNRFSNVLKNIRGQAKLTEDNIKEALREVRLALLEADVALSVVKEFVNNVKEKAL GQEVAGSLTPDQAFIGVVNQALIELMGKENKTLDLSVAPPAVVLMAGLQGAGKTTTVGKL ARLLKNEQKKKVLVVSADVYRPAAIEQLRLLAEQVGIDFFPSNSNQKPVEIATAAIDYAK KHFYDVLMVDTAGRLAIDEEMMNEIKALHAAVNPVETLFVVDAMLGQDAVNTAQAFNEAL PLTGVILTKMDGDSRGGAALSVRQITGKPIKFIGVGEKITGLEPFHPDRIASRILGMGDV LSLIEDVQKGIDEEAAAKMAKKLQKGKGFDLNDFKEQIQQMRNMGGLESLMSKMPGELGQ ISKQIPEGTAEKAMGKVEAIINSMTPKERANPALLKASRKRRIAAGAGTSVQEVNKLLKQ FEQSQQMMKMFSGSGMAKLMRMAKGIKGMKGMFPGL >gi|289656332|gb|ADEA01000035.1| GENE 59 56179 - 56640 575 153 aa, chain + ## HITS:1 COG:no KEGG:NGK_2099 NR:ns ## KEGG: NGK_2099 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 1 153 1 151 151 116 67.0 2e-25 MNRRQFLGGTAAVSLAAAASFARAHDHHSHTGNHVHTATTAAPKAYEAARKAAAHCVETG QICLAHCIALLSNGDTSMKDCSVAVNQMLALCGSLQNLAAQNSRLVPALAKVCLEACKQC SAACKVHAGHHAECKACYKSCLACIKECEKIAA >gi|289656332|gb|ADEA01000035.1| GENE 60 56716 - 57321 1020 201 aa, chain - ## HITS:1 COG:NMA2195 KEGG:ns NR:ns ## COG: NMA2195 COG3560 # Protein_GI_number: 15795064 # Func_class: R General function prediction only # Function: Predicted oxidoreductase related to nitroreductase # Organism: Neisseria meningitidis Z2491 # 1 201 1 201 201 335 85.0 3e-92 MTYQTLQQAAETRRSIYALNKNLPISNEEISEIVKHAVLHTPSSFNSQSTRVVVLFGEEH GKVWQFVEDALRAIVPAEQFEPTAQKLNLFKAGAATILFFEDQNVVKGLQEQFPSYAANF PVWADHANAMTQYAVWTTLAAAGVGANLQHYNPLPDAAIAKEWNLPESWLLRAQMVIGGI EAPAGEKAFEPVENRLKVFGA >gi|289656332|gb|ADEA01000035.1| GENE 61 57418 - 57819 692 133 aa, chain - ## HITS:1 COG:NMA2196 KEGG:ns NR:ns ## COG: NMA2196 COG2259 # Protein_GI_number: 15795065 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis Z2491 # 1 133 1 132 132 152 79.0 1e-37 MSATCARIQPILLSVLRIVTAYLFLLHGTAKFFGFPVAMGSGSPEGLMLVAGILEIVGGI LLILGLFTRPAAFILSGQMAVAYFMMHAAKGSALFPLANGGESAVLFCFVFLYLAAAGGG SLALDNLFGKNKA >gi|289656332|gb|ADEA01000035.1| GENE 62 58167 - 59063 1324 298 aa, chain + ## HITS:1 COG:NMB0290 KEGG:ns NR:ns ## COG: NMB0290 COG0583 # Protein_GI_number: 15676212 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Neisseria meningitidis MC58 # 1 297 1 297 303 443 72.0 1e-124 MDTLFSLKVFRQVVQSGSFTRAAEQLDISTAMASKHVSHLENSIKAKLLHRNSRNLHLTE AGEEYYRQCSYALDTLDTAAQKAAGGADTPQGMLRVTMPLWFAGNLISNWLVEYRERYPE VTLDLVLDNRHVDLIAEGFDLALRVAKTLSPSLIIKPLAKIQFVLLASPDYLAKHGTPQT PEEAMHHPAILPSYTDQRNMEITHRETGEKSILTLNPVIQCDNTLMIRELIRTGAGIAYQ PLWSVRQDLAEGRLARLLPDYRVLTVQLNAVYVDRAFLSAKVRSFIDFLNEKISAEQD >gi|289656332|gb|ADEA01000035.1| GENE 63 59151 - 63383 6312 1410 aa, chain - ## HITS:1 COG:NMA0295 KEGG:ns NR:ns ## COG: NMA0295 COG2911 # Protein_GI_number: 15793310 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 32 1408 2 1371 1371 1586 59.0 0 MPATLYSDNDMTQEQENLQSAETQKPSENDRPSENEKRSDAAPPKRRKNRLRGLLLAFSG VALASAGFVGWLAGTESGLRFGLYKIPSWFGVKITSESLHGTLWRGFHGENWLIETDGAD VALSRFRFGWRPRELSDLRLHVTELSAGDIRIATKPTPPKEKKPSQGLPESIDLPVWITL DRLETGKISVGKNFKKQTVYLNRVRAAYRYDQKQHRLDIERLESPWSNSAGAVEIGLKPP FALNSAIYTKGELDGETIHGTTRLTGSLRDMQSELLLDGDAVHLKARSLLHPFAGKLNEI IKEVQIKGFNINPHSFLDSLPKAELDFDAIVVPSFSDGIALDGAIDLSNEAAGYADENSI PVRSILGDFTIDGNGLIRVKDTAVELLQQGTVTVNGSVDTAADKLDLALAVKNLGADDAV RQQIAGRLNGSINVKGETGSPEIGWKLDSGYAETDGLLTIRSDRRLGQKTLTLDKLRIRP DNGGELAATGSLELFRHRRLKLDVSSKAFNPARIDRQLPEGNVNGTIAVSGELADQKFGG KMKFAPSTLSGVALSGSADIQYESNYLSRALTDIRLGSNTIKTSGSFGRKGRRLNLDISA PDLSRFGFGLGGAVTAKGYVSGDLSDGLKTLEADLDGRARAFRMADLVQINTLDFKLKGS PDINRPLNAELKGERIVLAGKSPTTVDAVNLFVSGTGANHRIRGGSSMALDDKRYKLEID AAGGLNKDKTRWKGIIDALDISGAFNLKLQNRMNLEAGADHVSMSAARWSAMGGSLNLQN FVWDKKTGITTKGNAQNLHMAELHNFYTPPVEHNLVLGGDWDMSYSQNARGYLNIVRQSG DIILPDNKQPLGLSALALRTRFQNGRIDAALEGGTRFGKVDATVGISQQFGNNIANAPVS GKVNVSIARLESLRVLLPSTAQSLSGSFNASAVIGGRAGSPTVNGTLNGATNYGRLDGNV TVGQGSDFMNAPLGGRINITVPELEAIRNFLPVGQTVKGRLNAAVTLAGRVNEPQLNGTL NGENLYYRNQAQGLILDNGILRSRLQGQKWIIDSLKFHRGGTVELKGEAALDKSNPDVNV DIVFDKYRTLSRPNRRLVLSGQTKVLYHPEKGLVLTGSLKADSGMFGLQKSSMPTLDDDV TVVGEEQKVQTASTPIFMDLDLDLNDNVRFSGEGLNVTLGGTLKLQARPGETIQGVGAVK VVKGRYKAYGQDLDITKGVISFVGPLTDPNLNIRAERRLSPVGAGVEVLGSLNNPRVTLV ADEVMSEKDKLSWLILNRASSGNDSDNAALSAAAGALLAGQINDRIGLVDDFGFTSKRSR NAQTGELNPAEQVLTVGKQLTSELYLGYEYGMNSAAQSAKLVYQLTRAIQAIVRVGNESS GGELKYTIRFDHWRKQKEPQETVESKGKVQ >gi|289656332|gb|ADEA01000035.1| GENE 64 63440 - 65305 2877 621 aa, chain - ## HITS:1 COG:NMA0296 KEGG:ns NR:ns ## COG: NMA0296 COG0729 # Protein_GI_number: 15793311 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein # Organism: Neisseria meningitidis Z2491 # 57 621 51 615 615 900 75.0 0 MCVKFVAEPMEKLLPPILTTTLALACAQAWAADDFDPNTAEYRRIPQKQTQGQEQEKQVK LKPKFPVRVETDHSEIKKMIEEYLPLITQQQEEELDSEQVGFLAEEAPDNVKTMLRTKGY FNSKVSIRAEKGGYVVSVTPGPRTKVDNVSVAILGDILSDENLADYYKHAMENWGQPVGG YFDNAEWSNSKTSVLSAVTRKKYPLAKISTSQATVNPDKHTADLNVIVESKQPVYFGDFE ISGTKRYPVSVVQGLARFRPGSPYDLDLLLDFQQALEQNGHYSGASVQADFNNMKDDRVP VKVNVSETKLHKLETGVRYDSEYGLGGKIGYDYYNLFNRGYIGSVVWDMDKYETTLAAGI SQPRNSDGKYWTTNTSYNRSTTQNLEKRALTTGIWRVRDRNGIESRLGLEFITEDRKVPD TNYDLGRSHATMLTASWKRQNIETELRPENGYYLDGKIGATLGSLFSSTAMARAAAKAGY FFTPENKKIGTFIVRGQAGYVYAKEGKEVPSSLEFRTGGASSVRGYELDSIGKAGPNGSV LPERALLVGSLEYQFPLTKSLSGAVFHDMGDAAVNFKKMTMKHGTGLGVRWFSPVAPFAF DIAYGHQDKKIRWHISLGTRF >gi|289656332|gb|ADEA01000035.1| GENE 65 65628 - 66845 1832 405 aa, chain + ## HITS:1 COG:NMA0298 KEGG:ns NR:ns ## COG: NMA0298 COG3633 # Protein_GI_number: 15793312 # Func_class: E Amino acid transport and metabolism # Function: Na+/serine symporter # Organism: Neisseria meningitidis Z2491 # 1 405 1 405 409 552 82.0 1e-157 MASSNLLIRAVNRISLVQQIVIGLTLGIALAVLAPQAGIAAGLLGSLFVGALKAVAPILV FALVLAAIAQHQKGNEAYIKPIIVLYLIGTFSAALVAVIASFAFPTMLIFSKAGDMSATP PGGIIEVLKTLLMNLVSNPISALADANYIGILAWALILGFAVRNHGSDTTRQVVADTAET VSTVVKWVIRFAPLGIFGLVSSTIAETGFGALKGYMHLLAVLLGSMIFIALVVNPLIVWW KIRRNPYPLVFTCLRESGVYAFFTRSSAANIPVNMALAKKLGLHEDTYSIAIPLGATINM AGAAITITVLAMAAAHTQHIQVDFFTALLLSLVATVSACGASGVAGGSLLLVPLACSLFG ISNDVAMQVVAVGFIIGVIQDSAETALNSSTDVLFTAAADLGRER >gi|289656332|gb|ADEA01000035.1| GENE 66 67031 - 68476 2196 481 aa, chain + ## HITS:1 COG:NMA0222 KEGG:ns NR:ns ## COG: NMA0222 COG3104 # Protein_GI_number: 15793245 # Func_class: E Amino acid transport and metabolism # Function: Dipeptide/tripeptide permease # Organism: Neisseria meningitidis Z2491 # 4 481 8 485 485 701 79.0 0 MSGTSDKTFFGHPFQLSTLFHIELWERFSFYGMQGILLIYLYYAADKGGLGIDKSLAGGI VGAYGGSVYLSTILGAWFADRVWGAEKTLFISGVVVMLGHIALAIVPGLYGLLLGLVLIA LGSGGVKSSASSMVGALYESDDMRPLRDAGFSIFYISINIGGFLGPLLTGLLQTNLGFHY GFGAAAVGMAFGLWRYSRGRKNLPHPSVPNPLPQGQGKTAAAAGLLITAALGGVIAAGWL TLDNFSMALLGTVIAAVIVYFIRLLTNPQVDADNKRHIAAYIPLFLTVCLFWSVWFQVYT VATVYFDETVDRTIGGFTIPVSWKDSMQSMWVVLFSGLMAAIWTKMGKRQPKTPLKFALA MLVVGLSYLGFVPFVSSGTPMPISVFALVLLSVTVGELMLSPIALSFSTKIAPPTFKTQM VALNFLGFSLGFTLGGVLFKTYYRADAPLSFFWLLCGIGVAGGAVLLLLVPVLNRMLKGA D >gi|289656332|gb|ADEA01000035.1| GENE 67 68603 - 70390 2959 595 aa, chain + ## HITS:1 COG:NMA1640 KEGG:ns NR:ns ## COG: NMA1640 COG0006 # Protein_GI_number: 15794534 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Neisseria meningitidis Z2491 # 7 593 69 655 659 837 69.0 0 MNAEQKLSALRQTMREHNLDAWIIPSADPHLSEYLPEHWQARVYFSGFTGSVGTLVVTAD KAGLWADSRYWEQAAHQLQGSGIELQKVGEVAPYTDWLAAELPDGASAGAAADMLSLTAK RQLETAFAAKNIRLDVSRDIADAVWTGRPALPQETVFPHDTAFVSETAAAKLARVRAAMK EQGAAWHLISSLDDTAWLTNLRGSDVPYNPVFLSYLLIGTDSAVLFVDEAKLNPASRALL AEAGITTAPYAAVREVLGKISDGLLVNPDKTAVSTLQLMPSENRLIENINPSTLFKSVKS AADLDHVREAMRQDGAALCGFFAEFERNLADGTAMNELDIDTMLHKYRSARPNFVSLSFN TIAGHNANGALPHYAATPEAFSDITGSGLLLIDSGAQYLGGTTDITRVVPVGETTPEQKR DYTLVLKAHIALAETVFPENIGSTLLDAICRKPLWQEQCNYGHGTGHGVGYFLNVHEGPQ IISYLTPANPNQTMKAGMITSNEPGLYRPGKWGIRIENLVASLPVASPQETEFGKFLHFE TLTLCPIDTRPIDFGLLTKAEVRWLNAYHADVREKLLPLVDGAARDWLILRTEAV >gi|289656332|gb|ADEA01000035.1| GENE 68 70558 - 71088 180 176 aa, chain + ## HITS:1 COG:no KEGG:CLD_2270 NR:ns ## KEGG: CLD_2270 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_B1 # Pathway: not_defined # 3 167 2 166 170 191 55.0 8e-48 MTKRTAIKTTIPEIVDYWFSRVYEGDLSVDASEAHERCWRCGYQTKLKRYHIIPHSRRGA DEPSNLVLLCKKCHLKNPNVSDPEIMWDWLKAYRTSLYNTFGIIQEFEEYKKIYGVSFSE QMMKLGISKVEELEPLIASKMEGCTRHFGESHLNKATFAGILRMIYKEIVKDRPKT >gi|289656332|gb|ADEA01000035.1| GENE 69 71117 - 71716 -251 199 aa, chain + ## HITS:1 COG:no KEGG:NMB2137 NR:ns ## KEGG: NMB2137 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis # Pathway: not_defined # 30 89 2 62 70 79 73.0 8e-14 MPVEEHTGRTISRVLSSDSHSSRRIIADTLQQPTRTLGGPRQCVLFGLAPNGVWPAAPCC QGHGALLPHLFTLTCAAFSDGHRRFCSLFHFPSRCRARPLAGIPPCGARTFLPVCLAAIR SDCLSSLYARRIIAQGGARPSETAAKCGLPTFSDGLASCRNVITITRQSVSKAQQPHPPH RLLSQKGTFFSFQTAKRIE >gi|289656332|gb|ADEA01000035.1| GENE 70 71776 - 72480 668 234 aa, chain + ## HITS:1 COG:NMA0101 KEGG:ns NR:ns ## COG: NMA0101 COG0850 # Protein_GI_number: 15793129 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation inhibitor # Organism: Neisseria meningitidis Z2491 # 4 234 8 237 237 298 65.0 5e-81 MKPAFDVKSARLDVLAVQLHTADLTELEEFLRQRTGQYRELDVVPFILDVQDFDHPESLN TGAVVSLFARYGMQILGLRHTSEIWAPYAAKLHLVFTLGDSVPAEPQPKAATPAPVQTPA AGNPTVLVSTPVRTGQQVYAENADLIVTGAVSQGAELIADGNIHVYAPMRGRALAGAGGN RNARIFIHSMQAELVSVAGIYRNFEQDLPDHLHKKPVQISLQDDRLVISAIDAE >gi|289656332|gb|ADEA01000035.1| GENE 71 72513 - 73325 1134 270 aa, chain + ## HITS:1 COG:NMA0100 KEGG:ns NR:ns ## COG: NMA0100 COG2894 # Protein_GI_number: 15793128 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation inhibitor-activating ATPase # Organism: Neisseria meningitidis Z2491 # 1 270 1 271 271 483 91.0 1e-136 MAKIIVVTSGKGGVGKTTTSASIATGLALRGHKTAVIDFDVGLRNLDLIMGCERRVVYDL INVIQGEATLTQALIKDKNCENLFILPASQTRDKDALNRDGVEKIMTELTEKMGFEYVIC DSPAGIEQGALMALYFADEAIITTNPEVSSVRDSDRILGILQSKSRKAEQGGTVKEHLLI TRYSPERVAKDEMLSVQDICDILRIPLIGVIPESQNVLQASNAGEPVIHQQDATAAEAYK DVIARLLGENREMRFLEAEKKGFFKRLFGG >gi|289656332|gb|ADEA01000035.1| GENE 72 73329 - 73595 437 88 aa, chain + ## HITS:1 COG:NMA0099 KEGG:ns NR:ns ## COG: NMA0099 COG0851 # Protein_GI_number: 15793127 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation topological specificity factor # Organism: Neisseria meningitidis Z2491 # 1 88 1 87 87 126 88.0 9e-30 MSLIDILFGKKTKTATVARDRLQIIIAQERAQGTSATPDYLPTLRKELLEVLSKYVNVSL DDIRISQEKQDGMDVLELNITLPEQKKV >gi|289656332|gb|ADEA01000035.1| GENE 73 73599 - 74519 1236 306 aa, chain + ## HITS:1 COG:NMA0098 KEGG:ns NR:ns ## COG: NMA0098 COG0583 # Protein_GI_number: 15793126 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Neisseria meningitidis Z2491 # 1 306 1 306 306 525 88.0 1e-149 MTLTELRYIVAVAQERHFGRAARRCFVSQPTLSIAIKKLEEELSVSLFDRSSNDIITTEA GERIVAQARRVLEEADLIKHLANEEQNELEGAFKLGLIFTVAPYLLPKLIMALRESAPKM PLMLEENYTHILTETLKRGDLDAIVVAEPFQEPGIVTEPLYDEPFFVIVPKGHPFEELDA ITPHLLSEEKVLLLTEGNCMRDQVLASCSELAAKQRIQGLTNTLQGSSINTIRHMVASGL AISVMPATALTENDHMLFSIIPFEATAPKRRVVLAYRRNFVRPKALTALRNAILHSHLNG VTFVKE >gi|289656332|gb|ADEA01000035.1| GENE 74 74708 - 75133 430 141 aa, chain - ## HITS:1 COG:NMB1933 KEGG:ns NR:ns ## COG: NMB1933 COG0355 # Protein_GI_number: 15677763 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) # Organism: Neisseria meningitidis MC58 # 1 139 1 139 140 179 80.0 2e-45 MNVMQVEVVSNEQNIYSGEATFVVIPTVQGELGIYPRHEPIMSLVRPGALRLTVPDQTEE VLVAVSGGLLEVQPEKITILADVAVRSGEMDQARAEEAKKVAEAGISQAQDDESLAKAQV ALAAAIAQLKTLDYLRSQRNK >gi|289656332|gb|ADEA01000035.1| GENE 75 75144 - 76541 1688 465 aa, chain - ## HITS:1 COG:NMB1934 KEGG:ns NR:ns ## COG: NMB1934 COG0055 # Protein_GI_number: 15677764 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, beta subunit # Organism: Neisseria meningitidis MC58 # 1 465 1 465 465 880 97.0 0 MSQGKIVQIIGAVVDVEFPRDAIPHVYDALKLDENNLTLEVQQLLGDGVVRTIAMGSSDG LKRGMTVSNTGAPITVPVGKGTLGRIVDVLGTPVDEAGPIDTNKHRAIHQTAPKFDELSA TTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGE RTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDESGKGR DVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTQTGSITSIQA VYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYD VARGVQSTLQKYKELRDIIAILGMDELSDEDKLTVMRARKIQRFLSQPFHVAEVFTGSPG KYVSLRDTIAGFKAILSGEYDHLPEQAFYMVGSIDEAVEKAKTVN >gi|289656332|gb|ADEA01000035.1| GENE 76 76580 - 77455 720 291 aa, chain - ## HITS:1 COG:NMA0518 KEGG:ns NR:ns ## COG: NMA0518 COG0224 # Protein_GI_number: 15793516 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, gamma subunit # Organism: Neisseria meningitidis Z2491 # 1 291 1 291 291 481 85.0 1e-136 MAVGKEILTKIRSVQNTQKITKAMQMVSTSKMRKTQERMRLARPYAEKVRLVMSHLAQTN SDHGIKLLEPHREIRKAGFILITSDKGLCGGLNANVLKRFLAQVQEYQEKGIAVEVVCLG SKGLAACQNIGLNIIASATNLGDTPKMETLLGPLTEIFQRYEKHELDVIQLVYSGFINTM RQEPRMEVLLPIGQSVMDEVNTRNDYNWDYRYEPSPVAVLEYLVRRYLESVVYQALSDNM ASEQAARMVAMKAATDNAGNAIKELRLVYNKSRQAAITTELTEIVAGAAAV >gi|289656332|gb|ADEA01000035.1| GENE 77 77480 - 79027 1129 515 aa, chain - ## HITS:1 COG:NMA0517 KEGG:ns NR:ns ## COG: NMA0517 COG0056 # Protein_GI_number: 15793515 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, alpha subunit # Organism: Neisseria meningitidis Z2491 # 1 515 1 515 515 915 94.0 0 MQLNPAEISELIKAKIENLSVNTEVRTRGTVISVTDGIVRIHGLSDAMQGEMLEFPGNTF GLAMNLERDSVGAVVLGEYEHIKEGDTVTCTGRILEVPVGRELVGRVVDALGRPIDGKGP INTTQTAPIEKIAPGVIARKSVDQPMQTGLKAIDSMVPIGRGQRELIIGDRQTGKTAVAL DAIVNQKDTDVICIYVAIGQKASSIANVVRKLEEYGAMEHTIVVAATASEAAALQYIAPY AGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLER AARINQDEVEKLTDGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLF NAGIRPAINAGISVSRVGGAAQTKVIKKLGGGIRLALAQYRELAAFSQFASDLDEATRKQ LQHGEVVTELMKQKQFCTLNTAEMALTLWAINNGSYEDVPVSKALAFETEFLSYVRTQQP GVLDVINSSGAMSDESEQILAEAMKSFKSSYAYQA >gi|289656332|gb|ADEA01000035.1| GENE 78 79038 - 79571 430 177 aa, chain - ## HITS:1 COG:NMB1937 KEGG:ns NR:ns ## COG: NMB1937 COG0712 # Protein_GI_number: 15677767 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) # Organism: Neisseria meningitidis MC58 # 1 177 1 177 177 238 72.0 4e-63 MAEFATIARPYAKALFGLAQEKKQIESWLGELKNLSAVVRQEKVISLIEQPETDTSEKAR LLTDLVGLKDDSLKNFVTVLAEQKRLPILPEVYVQYQDLTLTLNDTKSAVIYSAYELTSA QAAELTEMLKKRFNTELVVTTQVDPKLIGGIRVEVGDQVLDLSIRGKLNALYTTMTN >gi|289656332|gb|ADEA01000035.1| GENE 79 79576 - 80046 449 156 aa, chain - ## HITS:1 COG:NMA0515 KEGG:ns NR:ns ## COG: NMA0515 COG0711 # Protein_GI_number: 15793513 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit b # Organism: Neisseria meningitidis Z2491 # 1 156 1 156 156 185 89.0 3e-47 MNINATLFAQILVFIGLVWFTMKFVWPPIAKALDERAAKVAEGLAAAERGKNDFEQAEKK VAELLAEGRTQVAEMVANAEKRAAKIVEEAKEQASTEAARITAQAKADVEQEMVRAREIL REQVASLAVKGAESILRDEIDVSKHAQLLGALKQEL >gi|289656332|gb|ADEA01000035.1| GENE 80 80121 - 80357 446 78 aa, chain - ## HITS:1 COG:NMA0514 KEGG:ns NR:ns ## COG: NMA0514 COG0636 # Protein_GI_number: 15793512 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K # Organism: Neisseria meningitidis Z2491 # 3 78 2 77 78 94 94.0 3e-20 MGGLIAIACGLIVAFGAMGAAIGIGMVGSKYLESSARQPELIGPLQTKLFLIAGLIDAAF LIGVAIALLFAFVNPFAG >gi|289656332|gb|ADEA01000035.1| GENE 81 80427 - 81293 505 288 aa, chain - ## HITS:1 COG:NMA0513 KEGG:ns NR:ns ## COG: NMA0513 COG0356 # Protein_GI_number: 15793511 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit a # Organism: Neisseria meningitidis Z2491 # 1 288 1 288 288 495 92.0 1e-140 MAGESMTAADYIKHHLQSLTSLSDVAQGQGLKNIADFSFINMDTLFFSILLGVISSFLLW RGAKKATAGVPGRFQAAVEILFEFVDDMCKSIIHNEKSRRAVAPLGLTLFVWIFLMNAMD MLPVDLLPWTWQHLTGNHHALLRIVPTADLNTTLALAIGVLGICIYYNIKIKGFGGWMHE LFSAPFGAKLAPANFLLNLVEFLSKTVSHGMRLFGNMYAGELVFLLIALLGGAWAASGSV GVMDPILFVLHLIAGLAWAIFHILVITLQAFIFMALAFVYIGQAHDTH >gi|289656332|gb|ADEA01000035.1| GENE 82 81283 - 81660 187 125 aa, chain - ## HITS:1 COG:NMA0512 KEGG:ns NR:ns ## COG: NMA0512 COG3312 # Protein_GI_number: 15793510 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit I # Organism: Neisseria meningitidis Z2491 # 9 125 1 117 117 112 65.0 2e-25 MVLVSLTIMRQILIWQCAMLAAVAFVGAVCWGGRGFWSALAGGASYLIPTVAAVLLLRLL KNRPYLQSRMFMAGEALKVMLSLALMLSFFAVWHQSLVFLPFLFGLFSVSHLVFLVLLRV KDYGR >gi|289656332|gb|ADEA01000035.1| GENE 83 81964 - 82824 1222 286 aa, chain - ## HITS:1 COG:NMA0508 KEGG:ns NR:ns ## COG: NMA0508 COG1475 # Protein_GI_number: 15793507 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Neisseria meningitidis Z2491 # 1 284 1 284 286 449 85.0 1e-126 MAKPKSGLGRGLDSLISNSIGDSSSDRLTTVAVKDIQPGRYQARVQIDDEALQELADSIK AQGVIQPVIVREHGLSQYELIAGERRWRASQLAGLTEIPVVVKSISDETALAMGLIENLQ RENLNPIEEAQGLKRLADEFGLTHETIAKAVGKSRSAISNTLRLLSLPEPVQDMLYQRRL EMGHARALLTLPVVEQLQLAQKAVKNGWSVREVERRSQVAQQAVRKDVKKTISADIRRLN DALTEKLGVNVEVRTTNHKKGKIVLHFDTPETFEYLLKQLGVEYEA >gi|289656332|gb|ADEA01000035.1| GENE 84 83426 - 83989 769 187 aa, chain + ## HITS:1 COG:NMB1945 KEGG:ns NR:ns ## COG: NMB1945 COG0163 # Protein_GI_number: 15677775 # Func_class: H Coenzyme transport and metabolism # Function: 3-polyprenyl-4-hydroxybenzoate decarboxylase # Organism: Neisseria meningitidis MC58 # 1 186 1 185 190 276 72.0 1e-74 MTKRRIVLGISGASGFQYGYKALQLLQDIENVETHLVVSKGAEMARALETPYTKEEVCKM ADIVHPIGNLAASISSGSFKTVGMLVAPCSMRTLAAVAHGYSDNLLTRAADVVLKERRSL VLMVRETPLNLAHLDNMRRVTEMGGIIFPPVPALYLQPQSVDDILTHSVSRALELLGLDV PNLPHWG >gi|289656332|gb|ADEA01000035.1| GENE 85 84305 - 85789 1328 494 aa, chain - ## HITS:1 COG:alr0276_3 KEGG:ns NR:ns ## COG: alr0276_3 COG2931 # Protein_GI_number: 17227772 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: RTX toxins and related Ca2+-binding proteins # Organism: Nostoc sp. PCC 7120 # 255 357 135 242 293 66 38.0 1e-10 MVKLNEKAEVQLKRLGFHEKRFNSTMSELDRIKADDELVGQINKFSSQGRGFFETKDGKA SAYHDPNDRNIYFGLGSQYVTARILAHEVGHALGRNQAKSADYYPTAKSYAQARGYGEAE AIYNEARMVAYEEQRNGRAYSTHISGGLYPQVKGKSYEQVKDLLARENMYGMYPSTNGSV RLSYYENDILFFMHRRTAFEKDFAEAGLRQSDMVGFVKHMANYDTFGDSRGNNVNANGAF DRQSLLQGKPTTRLNGGASMYGDAGNDVMTGTKSNDRMLGGSGNDTLKGGDGNDLLAGNA GKDRLYGGRGYDTYRADRYDTIRDEDGKGEVFLDGRRLRGGVRDLSEHDRTVFRDGNTVY DWNRKTGVLDVNGLKIENFKNGDLGIRLEEGRGAAHRTGTYNQTTSEHYGYHTNAAESNP DKIQKLRALIDGFKNDTDGSFAVRTLEENRDVVENFRARQQERLAQNGQQQPDMTQEMQP EIQHQRNFGGRSFG >gi|289656332|gb|ADEA01000035.1| GENE 86 85808 - 86449 526 213 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298370418|ref|ZP_06981734.1| ## NR: gi|298370418|ref|ZP_06981734.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 213 1 213 213 397 100.0 1e-109 MKLSVTTLLTALLLTSCTPQANSRSTENSSNTQAVKKGTMMKQVRNRCRSMLHKVESRDD LIKQMYETAFKDDCLYAMYAEELENIWQIPVVEGYDSNHLHRNLLSSVGLYVAVRHTAYK TSFVILPTEQYFKEKISIFPENRFPDFLPKPKEKEMPPEYGGYYPRQKNDPIKELVDYYW RENGREMVAANNGSGAIQAFTFYSNTEMSPMGH >gi|289656332|gb|ADEA01000035.1| GENE 87 86581 - 88092 2471 503 aa, chain - ## HITS:1 COG:NMA1638 KEGG:ns NR:ns ## COG: NMA1638 COG1190 # Protein_GI_number: 15794532 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Lysyl-tRNA synthetase (class II) # Organism: Neisseria meningitidis Z2491 # 1 503 1 503 503 927 89.0 0 MSEQNYPQTEPQLDENQIIALRREKLHNIRKERIAYPNDFKRDSFAADLHKKYGEINKEE LDPQDIPVKIAGRMMLKRQMGKASFATIQDMSGQIQLYLNNKGVSQEVLDDFNHWDLGDI VGAEGTLFKTNHGELTVRVSAIRLLSKSLRPLPDKHKGLADQEVKYRQRYVDLIVNPESR DTFIKRSKIIQTVRNYMVSEGYLEVETPMMHPIPGGATAKPFITHHNALDMPLYLRIAPE LYLKRLVVGGLERVFEINRSFRNEGMSTRHNPEFTMMEFYEAFCTYERMMEMTEGVIRAC AETVCGAAKISCNGKEVDLASPFERLTILEAIKKYNPHYTDEQLADEAWLKKEIVKHGES LPPSPGIGSLQLALFEGCAEGKLWNPTFIIDYPVEVSPLARASDTKPGLTDRFELFVVGR ELANGYSELNDPEDQSTRFRAQVAQKDAGDDEAMHYDADYIRAMEYGLPPTGGSGIGLDR LVMLLTDSQTIRDVILFPQMRPE >gi|289656332|gb|ADEA01000035.1| GENE 88 88893 - 89366 170 157 aa, chain - ## HITS:1 COG:SMa1302 KEGG:ns NR:ns ## COG: SMa1302 COG0630 # Protein_GI_number: 16263162 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis # Organism: Sinorhizobium meliloti # 2 146 181 325 329 149 50.0 1e-36 MKSLVNHIPFDERLITIEDARELFIPQPNVVHLLYSKGGQSASNITAKSCMEACLRMKPD RIILAELRGDESFYFIRNCASGHPGSITSCHAGSTDQAWDQLALMVKASPEGSGLEFDVI KRLLMLTIDIVIHIQAHNGKRYITGIDFDPSRRNDLK >gi|289656332|gb|ADEA01000035.1| GENE 89 89933 - 90280 165 115 aa, chain - ## HITS:1 COG:SMa1303 KEGG:ns NR:ns ## COG: SMa1303 COG2948 # Protein_GI_number: 16263163 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirB10 components # Organism: Sinorhizobium meliloti # 1 113 262 362 390 60 32.0 1e-09 MESQGTDSLGGNGHVGDYRSHWASRLGSAVLISLIGDGLDYLSDKNTSTNSIVTTSTSTT ITPTETKTARTLERMAQQELNKMGMRPPTVTINQGEILNIFVSQDIDFENVIGNQ >gi|289656332|gb|ADEA01000035.1| GENE 90 90478 - 90633 69 51 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MELAVQGGQVALLFLKMKVIRVVVGLLRDCSHRNYINLTIYWYKGHIFVAF >gi|289656332|gb|ADEA01000035.1| GENE 91 91192 - 91944 156 250 aa, chain - ## HITS:1 COG:XFa0013 KEGG:ns NR:ns ## COG: XFa0013 COG3504 # Protein_GI_number: 10956724 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirB9 components # Organism: Xylella fastidiosa 9a5c # 33 246 35 248 278 81 26.0 1e-15 MNIFLRKICLPVFIFSICINIAAASSTVTEYTYTPDKIYTVRSSLGIVTQIEISPQEDIK DFGTGYSDGWDLARRENTFYIRPKVANADTNLTIRTAAHNYLFDLKVVSKEWRGLESAKN KGVQYKIKFNYPDGTEFKKEKSLDLNSGLSTKISGHVGYFTNYDYAAKSKSAWLVPTKVY DDGKFTYIYLNVNKFMPTGNFPAIFARKDRNGEEMVVNTTIQNNVIIVNGTYPFLVLRHG NDVVGIRRNF >gi|289656332|gb|ADEA01000035.1| GENE 92 91985 - 92830 240 281 aa, chain - ## HITS:1 COG:BMEII0032 KEGG:ns NR:ns ## COG: BMEII0032 COG3736 # Protein_GI_number: 17988376 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, component VirB8 # Organism: Brucella melitensis # 1 239 1 234 239 89 29.0 1e-17 MFKKKEKTQKVTEAVIRSKSFELSLADMVKRSEKRAWFVASVSMVLVVISGIGVALILPL KQEVPYVVVADRDTGFSTVSRLEGDFKNNKITASEAINKSNVAQYVIARESYDWELTNIN GWGKVLAMSDAKVATDYKNQFLEDFPQNPNKIYGRALSVRTKIRNITLAYTDGRQNTPTG ATVNYDRYLFDKSKGSLQPLDRQMATMTFEYRPNLKMAEEYRYDNPLGFQVTNYQVETDN IAKPTMELPSNFPIVSKDSLGPQKEEDATSPQADLMAVSPR >gi|289656332|gb|ADEA01000035.1| GENE 93 92860 - 93285 189 141 aa, chain - ## HITS:1 COG:no KEGG:XAC2622 NR:ns ## KEGG: XAC2622 # Name: not_defined # Def: hypothetical protein # Organism: X.axonopodis # Pathway: not_defined # 1 134 4 136 139 99 38.0 5e-20 MFFKKYFLGILICSVLLGCNSTPPAKDFSNNWSPVNKFTDKITEIPLHHKYTYRVMAIDK TLKSLLNRWAEDSKLSVEYGSCYDYTLPKAAEKINAVELNKALEELNRIYSAKHVVVSVR KGSLVVETVANAAGYIDTSCF >gi|289656332|gb|ADEA01000035.1| GENE 94 93257 - 93346 103 29 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPKKYFLKNMLLNFLHSWMYQHPLIKLQN >gi|289656332|gb|ADEA01000035.1| GENE 95 93907 - 94083 102 58 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MMTEVRNACSAIAVGSKSASAKSDDDLEKAERKAFGGCSQYSNDCKILYSGCSRHPDY >gi|289656332|gb|ADEA01000035.1| GENE 96 94133 - 94405 113 90 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298370425|ref|ZP_06981741.1| ## NR: gi|298370425|ref|ZP_06981741.1| arabinan endo-1,5-alpha-L-arabinosidase A [Neisseria sp. oral taxon 014 str. F0314] # 1 90 1 90 90 145 100.0 1e-33 MKKILFIFMMLNCFASANPLGGNPTNGYCQTVDGSACGWGGGGSSSRRVYKIPNRWGVIY YNPANDAVGYSENNTEGYRSANKEALANCI >gi|289656332|gb|ADEA01000035.1| GENE 97 94230 - 94652 69 140 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTPQRFGILYTRREEEPPPPQPQALPSTVWQYPLVGFPPNGLAEAKQFSIINIKRIFFII NPLFYYSATVIFFISISLFHKPPITIPCPAVPERRIRIKPQRRPDQVPHQQRRRDHQCAH HQPQAALYDRNLCNTRPRFR >gi|289656332|gb|ADEA01000035.1| GENE 98 94786 - 95313 116 175 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|255066632|ref|ZP_05318487.1| ## NR: gi|255066632|ref|ZP_05318487.1| hypothetical protein NEISICOT_01642 [Neisseria sicca ATCC 29256] # 1 173 1 177 178 205 64.0 9e-52 MKKIFLALLLVLPCSTIANGLNAINDPVMNPCIQRPYLAGCGANGSSTPQRVYKVPNRWG AIYVNPANAAIGYSENNTEGYRSANKEALANCIKAGGGKNPIASDGKGCRRMTEVRNSCS AVAIGGVVGNGGAGVKSDDNLEKAEQKALAACSEYSDKCVIKYSGCSRHPDYRVD >gi|289656332|gb|ADEA01000035.1| GENE 99 95324 - 96247 964 307 aa, chain - ## HITS:1 COG:no KEGG:Smal_2439 NR:ns ## KEGG: Smal_2439 # Name: not_defined # Def: TrbL/VirB6 plasmid conjugal transfer protein # Organism: S.maltophilia_R551-3 # Pathway: not_defined # 20 289 64 329 386 140 32.0 4e-32 MKFGDRGLSALSTVLIPSLMSMVTVWLMFEGYRILNGQSREPLNMFLWRGAKMVVIITVA SWIMNNPTGLRDWISEHIKNPIASVIVGGEYASPEAMVDSSLLLMHLIMGAFGSLQAATS NDNGSAFSNFIMASGVAQGTPAVVAGALLLLNEIALSLAILTAPAFILCLLYDPTKQYFQ GWLKFFLGSLLTMAVLSVMVTIGLKVMLVYATKVLGEYGVGVAVAGSASQDRPGIAQITI MQGGLGLMMSTLMITAPLLVGNLIGSSLGGFSGYNMFSGGNVPRDSNNNPLVQDRSKKDD GGATPLK Prediction of potential genes in microbial genomes Time: Thu May 26 13:52:58 2011 Seq name: gi|289656331|gb|ADEA01000036.1| Neisseria sp. oral taxon 014 str. F0314 cont1.36, whole genome shotgun sequence Length of sequence - 2279 bp Number of predicted genes - 5, with homology - 3 Number of transcription units - 3, operones - 1 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 320 352 ## gi|298370430|ref|ZP_06981746.1| VirB6 protein 2 2 Tu 1 . - CDS 429 - 548 78 ## - Prom 653 - 712 3.4 - Term 685 - 736 10.1 3 3 Op 1 . - CDS 739 - 918 99 ## 4 3 Op 2 . - CDS 743 - 1279 98 ## gi|255066634|ref|ZP_05318489.1| conserved hypothetical protein 5 3 Op 3 . - CDS 1291 - 2277 898 ## Smal_2439 TrbL/VirB6 plasmid conjugal transfer protein Predicted protein(s) >gi|289656331|gb|ADEA01000036.1| GENE 1 2 - 320 352 106 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298370430|ref|ZP_06981746.1| ## NR: gi|298370430|ref|ZP_06981746.1| VirB6 protein [Neisseria sp. oral taxon 014 str. F0314] # 1 106 22 127 328 204 100.0 1e-51 MKFGDRGLSALSTVLIPSLMSMVTVWLMFEGYRILNGQSREPLNMFLWRGAKMVVIITVA SWIMNNPTGLRDWISEHIKNPIASVIVGGEYASPEAMVDSSLLLMH >gi|289656331|gb|ADEA01000036.1| GENE 2 429 - 548 78 39 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAATTIVALEQSNSLVENLVGGVGKGIDSAKKDIRRALQ >gi|289656331|gb|ADEA01000036.1| GENE 3 739 - 918 99 59 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGRLYWEELEEDIGLLQKMPTLLLRQSKKRFLHVRPGNHLNVLSAIQAVPATPIISVTK >gi|289656331|gb|ADEA01000036.1| GENE 4 743 - 1279 98 178 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|255066634|ref|ZP_05318489.1| ## NR: gi|255066634|ref|ZP_05318489.1| conserved hypothetical protein [Neisseria sicca ATCC 29256] # 1 178 1 179 179 302 89.0 5e-81 MKKIFVAFILAVSNFVFANGLNAINDPVMNPCIQRPYLAGCSGNNQSGGQPRQIINIPTR WGAIYYNAANQAIGYSENNTKGYRSANKEALANCIKAGGGKNPLDRNGEGCSLMTEYRNM CGAIVLGGAGGRYRAAAKNADSIAEAEQKAISACEAGQPFKCTVRYSGCSRHPDYLRY >gi|289656331|gb|ADEA01000036.1| GENE 5 1291 - 2277 898 328 aa, chain - ## HITS:1 COG:no KEGG:Smal_2439 NR:ns ## KEGG: Smal_2439 # Name: not_defined # Def: TrbL/VirB6 plasmid conjugal transfer protein # Organism: S.maltophilia_R551-3 # Pathway: not_defined # 9 312 32 329 386 149 31.0 1e-34 MDNTENLGFFILIKTYVEILIMKFGDRGLSALSTVLIPSLMSMVTVWLMFEGYRILNGQS REPLNMFLWRGAKMVVIITVASWIMNNPTGLRDWISEHIKNPIASVIVGGEYASPEAMVD SSLLLMHLIMGAFGSLQAATSNNNDGALANFIMASGVAQGTPAVVAGALLLLNEIALSLA ILTAPAFILCLLYDPTKQYFQGWLKFFLGSLLTMAVLSVMVTIGLKVMLVYAAKVLGEYG VEAMMAKSASSTESRPGIAQITIMQGGLGLMMSTLMITAPLLVGNLIGSSLGGFSGYNMF SGGNVPRDSNNNPLVNKEQKQGDDGKVK Prediction of potential genes in microbial genomes Time: Thu May 26 13:53:26 2011 Seq name: gi|289656330|gb|ADEA01000037.1| Neisseria sp. oral taxon 014 str. F0314 cont1.37, whole genome shotgun sequence Length of sequence - 6385 bp Number of predicted genes - 6, with homology - 5 Number of transcription units - 4, operones - 2 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 315 337 ## gi|298370430|ref|ZP_06981746.1| VirB6 protein 2 2 Op 1 . - CDS 424 - 1326 1245 ## gi|298370432|ref|ZP_06981748.1| conserved hypothetical protein 3 2 Op 2 . - CDS 1351 - 3360 1356 ## COG3451 Type IV secretory pathway, VirB4 components - Prom 3406 - 3465 3.6 4 3 Op 1 . - CDS 3871 - 3966 71 ## 5 3 Op 2 . - CDS 3973 - 4287 151 ## COG3702 Type IV secretory pathway, VirB3 components - Prom 4307 - 4366 3.2 - Term 4445 - 4486 -0.7 6 4 Tu 1 . - CDS 4736 - 5413 342 ## Smlt3002 putative type IV secretion system conjugal protein - Prom 5521 - 5580 6.1 Predicted protein(s) >gi|289656330|gb|ADEA01000037.1| GENE 1 3 - 315 337 104 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298370430|ref|ZP_06981746.1| ## NR: gi|298370430|ref|ZP_06981746.1| VirB6 protein [Neisseria sp. oral taxon 014 str. F0314] # 1 104 22 125 328 199 100.0 5e-50 MKFGDRGLSALSTVLIPSLMSMVTVWLMFEGYRILNGQSREPLNMFLWRGAKMVVIITVA SWIMNNPTGLRDWISEHIKNPIASVIVGGEYASPEAMVDSSLLL >gi|289656330|gb|ADEA01000037.1| GENE 2 424 - 1326 1245 300 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298370432|ref|ZP_06981748.1| ## NR: gi|298370432|ref|ZP_06981748.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 300 1 300 300 522 100.0 1e-147 MNHKRTITALTAALMLSAALPVAAQSVPVIDDNSNHIKGNTDKIKGNTDKIKGYLDEIRQ FLGADKRDKTVKGSGLETDVADFKKIESQAKQLTSGQWSNGDEEKFRKAIETYYGKDAAT SSMCNKGGGKSLAKGGTKSDEENMQNACNNARNLIALNLYEIHQLAEVLEERNEALQKLV KKWDYGTSGDLQKKQYQLALMQTLIQNDLSRLQASLAAYQTKINLYRQIQAEAERNILYG KQVDSPSAQLKKLAQKGGGMLTMIGAVLVLEKNNSLVENLVGGVGRGIDSAKKDIRRALQ >gi|289656330|gb|ADEA01000037.1| GENE 3 1351 - 3360 1356 669 aa, chain - ## HITS:1 COG:XFa0007 KEGG:ns NR:ns ## COG: XFa0007 COG3451 # Protein_GI_number: 10956718 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirB4 components # Organism: Xylella fastidiosa 9a5c # 2 660 154 813 815 528 42.0 1e-149 MQNQAIEKITELAANVEAVLRDYAPYRLGMYEGKNGVVFSETLELYAYLLNRIEEPVPVL NAPVYDYLAVSKQTFSPKNGDFVVTTPDQKNYFGAILNIKEYPDSTWPGILNGLKYLDFE YVITHSFSPKGRHDALKTLERTRGMMISSGDKAVSQISELDRAMDEVSSGNFVLGEYHFT IALYAESQEKLHQHIATARAELSNAGFVSAKEDVAIMASFYSQLAGNWKYRTRLANVSSL NFLGLSPLHNFSTGKMHNNPWGDAVTVLQTTNGQPYYFNFHATHPSENSLGEKAIANTMV IGKSGTGKTALINFLLSQVQKFDPKPTIFFFDKDRGAEIFVRACGGNYMALDNGQPTGFN PFQCENNEANIQFLAGLIKLIAGKKEYTASEEEDIMRAVKAILDTPLRLRTMTNFQKSLP NLGDDSVFARIRKWTQEGSLGWVFDNPVDTIDLTRASIIGFDYTDVIDNDEVRTPVINYL IHRLEELIDGRPLIYVMDEFWKILDGEGGLKDFAKNKQKTIRKQNGLGIFATQSPEDALK SDISAALIEQTATMILLPNPNADKKDYIDGLKLTEAEFNVIVNLDERSRCFLVKQGHSSA VCQLNLRGMDDVLSVISASTDNIEIMHRIIGETAQAEGIKADSLHPEQWLERFYRERKGS RNSGAAVKP >gi|289656330|gb|ADEA01000037.1| GENE 4 3871 - 3966 71 31 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLNFLIYLDIPKLMVLYLYIRILIFSFIGDN >gi|289656330|gb|ADEA01000037.1| GENE 5 3973 - 4287 151 104 aa, chain - ## HITS:1 COG:BMEII0027 KEGG:ns NR:ns ## COG: BMEII0027 COG3702 # Protein_GI_number: 17988371 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirB3 components # Organism: Brucella melitensis # 2 83 16 97 116 64 39.0 5e-11 MKKNTLFRGCTRPPMFMGVPYVPFFIGAGIPLLFAMYFNLFYLLAIPVIIMILRQIAKQD EMVFRLWGLKLLFLFQTKNRSVRKGLSVTNPNIYRKTPSKTYNS >gi|289656330|gb|ADEA01000037.1| GENE 6 4736 - 5413 342 225 aa, chain - ## HITS:1 COG:no KEGG:Smlt3002 NR:ns ## KEGG: Smlt3002 # Name: not_defined # Def: putative type IV secretion system conjugal protein # Organism: S.maltophilia # Pathway: Bacterial secretion system [PATH:sml03070] # 1 198 7 210 321 199 52.0 4e-50 MIDCGNLHVPPAVMQHVVHVESSFNPYAIGVVKGRLTRQPRNLQEALQTVKMLEAGGYNF SVGIAQVNRYNLKKYGLGSYEKAFDACSNLLAGSKILKECYISAKNDWGKAFSCYYSGNF ITGYRHGYVQKIFDSIRKYGNYANTVVSNPNIQIIDLDKSKKVFIPNGGAVQATRYIQPK NMINPSRIGYAVKPANGSNRAVAQIRADTHESENRNSSQDSTFVF Prediction of potential genes in microbial genomes Time: Thu May 26 13:54:22 2011 Seq name: gi|289656329|gb|ADEA01000038.1| Neisseria sp. oral taxon 014 str. F0314 cont1.38, whole genome shotgun sequence Length of sequence - 106333 bp Number of predicted genes - 108, with homology - 102 Number of transcription units - 71, operones - 29 average op.length - 2.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) - TRNA 19 - 94 92.5 # Lys TTT 0 0 + Prom 116 - 175 4.8 1 1 Tu 1 . + CDS 256 - 672 524 ## gi|298370436|ref|ZP_06981752.1| membrane spanning protein + Term 700 - 753 16.3 - Term 694 - 736 13.5 2 2 Op 1 2/0.261 - CDS 759 - 1739 1432 ## COG0861 Membrane protein TerC, possibly involved in tellurium resistance 3 2 Op 2 . - CDS 1812 - 2246 429 ## COG3399 Uncharacterized protein conserved in bacteria - Prom 2300 - 2359 4.6 + Prom 2259 - 2318 3.7 4 3 Tu 1 . + CDS 2436 - 2648 362 ## gi|298370439|ref|ZP_06981755.1| hypothetical protein HMPREF9016_01777 + Term 2678 - 2725 13.5 5 4 Op 1 22/0.000 - CDS 2748 - 3644 1419 ## COG0142 Geranylgeranyl pyrophosphate synthase 6 4 Op 2 2/0.261 - CDS 3628 - 3852 434 ## COG1722 Exonuclease VII small subunit - Prom 3874 - 3933 2.5 7 5 Tu 1 . - CDS 3992 - 4858 1315 ## COG1162 Predicted GTPases - Prom 4883 - 4942 3.6 + Prom 4912 - 4971 3.6 8 6 Tu 1 . + CDS 5017 - 5634 955 ## COG2979 Uncharacterized protein conserved in bacteria + Term 5658 - 5708 10.8 - Term 5642 - 5700 16.9 9 7 Op 1 . - CDS 5735 - 7105 2390 ## COG0015 Adenylosuccinate lyase - Prom 7160 - 7219 4.0 10 7 Op 2 . - CDS 7251 - 7850 447 ## COG2949 Uncharacterized membrane protein - Prom 7911 - 7970 3.1 - Term 7908 - 7970 15.2 11 8 Op 1 . - CDS 7991 - 9094 1832 ## COG1186 Protein chain release factor B - Prom 9120 - 9179 2.8 12 8 Op 2 . - CDS 9248 - 10165 1268 ## COG1752 Predicted esterase of the alpha-beta hydrolase superfamily 13 8 Op 3 . - CDS 10213 - 12069 232 ## PROTEIN SUPPORTED gi|225088774|ref|YP_002660041.1| ribosomal protein S16 - Term 12089 - 12124 2.1 14 9 Op 1 . - CDS 12223 - 12450 392 ## gi|298370449|ref|ZP_06981765.1| conserved hypothetical protein 15 9 Op 2 . - CDS 12509 - 13090 1016 ## COG0632 Holliday junction resolvasome, DNA-binding subunit - Prom 13145 - 13204 1.9 - Term 13100 - 13148 11.7 16 10 Op 1 2/0.261 - CDS 13297 - 14034 822 ## COG0797 Lipoproteins - Term 14050 - 14082 -0.9 17 10 Op 2 3/0.087 - CDS 14113 - 14577 574 ## COG0219 Predicted rRNA methylase (SpoU class) - Term 14595 - 14626 0.1 18 10 Op 3 . - CDS 14641 - 15063 459 ## COG1040 Predicted amidophosphoribosyltransferases + Prom 15255 - 15314 3.2 19 11 Tu 1 . + CDS 15362 - 16108 1189 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) + Prom 16139 - 16198 3.8 20 12 Tu 1 . + CDS 16434 - 17228 1056 ## COG0500 SAM-dependent methyltransferases + Term 17290 - 17340 2.3 - Term 17260 - 17311 18.2 21 13 Tu 1 . - CDS 17355 - 19970 4059 ## COG1012 NAD-dependent aldehyde dehydrogenases - Prom 20219 - 20278 5.7 - Term 20253 - 20326 10.9 22 14 Tu 1 . - CDS 20425 - 22623 3129 ## COG1199 Rad3-related DNA helicases - Term 22637 - 22679 11.9 23 15 Op 1 . - CDS 22696 - 23181 611 ## COG4922 Uncharacterized protein conserved in bacteria 24 15 Op 2 . - CDS 23273 - 23929 924 ## COG2910 Putative NADH-flavin reductase - Prom 23963 - 24022 4.1 + Prom 23967 - 24026 5.4 25 16 Op 1 . + CDS 24106 - 25008 1004 ## COG0583 Transcriptional regulator 26 16 Op 2 . + CDS 25005 - 25289 342 ## COG2827 Predicted endonuclease containing a URI domain + Term 25373 - 25405 -0.3 + Prom 25364 - 25423 5.9 27 17 Tu 1 . + CDS 25476 - 25997 538 ## COG3245 Cytochrome c5 + Term 26014 - 26046 4.0 - Term 26129 - 26171 11.9 28 18 Tu 1 . - CDS 26190 - 26393 145 ## - Term 26863 - 26909 13.6 29 19 Op 1 . - CDS 26935 - 28113 1993 ## COG0126 3-phosphoglycerate kinase - Term 28217 - 28255 10.2 30 19 Op 2 . - CDS 28273 - 29832 2285 ## COG0369 Sulfite reductase, alpha subunit (flavoprotein) - Prom 29918 - 29977 4.0 + Prom 29981 - 30040 5.3 31 20 Op 1 14/0.000 + CDS 30066 - 31382 1960 ## COG0612 Predicted Zn-dependent peptidases 32 20 Op 2 . + CDS 31452 - 32780 2130 ## COG0612 Predicted Zn-dependent peptidases + Term 32959 - 33001 -0.5 33 21 Tu 1 . - CDS 32792 - 34660 1447 ## COG0514 Superfamily II DNA helicase - Prom 34693 - 34752 5.2 34 22 Tu 1 . - CDS 34769 - 34870 66 ## - Prom 35055 - 35114 5.2 + Prom 34745 - 34804 4.5 35 23 Tu 1 . + CDS 34830 - 35261 630 ## NGO1942 hypothetical protein + Term 35282 - 35339 19.4 - Term 35270 - 35327 19.4 36 24 Op 1 2/0.261 - CDS 35351 - 35920 -42 ## COG0009 Putative translation factor (SUA5) 37 24 Op 2 . - CDS 35984 - 37255 1270 ## COG0151 Phosphoribosylamine-glycine ligase - Prom 37286 - 37345 6.4 - Term 37267 - 37308 0.7 38 25 Tu 1 2/0.261 - CDS 37394 - 38008 273 ## COG1739 Uncharacterized conserved protein - Prom 38032 - 38091 1.6 - Term 38019 - 38071 10.1 39 26 Op 1 29/0.000 - CDS 38095 - 39030 593 ## COG2025 Electron transfer flavoprotein, alpha subunit 40 26 Op 2 2/0.261 - CDS 39046 - 39795 605 ## COG2086 Electron transfer flavoprotein, beta subunit 41 26 Op 3 2/0.261 - CDS 39843 - 40685 323 ## COG0859 ADP-heptose:LPS heptosyltransferase - Prom 40815 - 40874 3.2 - Term 40848 - 40885 -0.0 42 27 Tu 1 . - CDS 40890 - 41525 326 ## COG1335 Amidases related to nicotinamidase - Prom 41619 - 41678 9.8 + Prom 41550 - 41609 4.0 43 28 Tu 1 . + CDS 41638 - 42318 655 ## COG1720 Uncharacterized conserved protein - Term 42326 - 42380 15.2 44 29 Tu 1 . - CDS 42405 - 43409 1110 ## COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase - Prom 43630 - 43689 8.4 + Prom 43812 - 43871 4.9 45 30 Tu 1 . + CDS 43896 - 44813 1104 ## COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase + Term 44835 - 44882 14.1 - Term 44823 - 44870 6.5 46 31 Op 1 1/0.391 - CDS 44890 - 45216 494 ## COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 47 31 Op 2 . - CDS 45276 - 45506 254 ## COG3205 Predicted membrane protein - Prom 45621 - 45680 8.8 - Term 45850 - 45884 5.2 48 32 Tu 1 . - CDS 45903 - 47351 2294 ## COG0362 6-phosphogluconate dehydrogenase - Prom 47382 - 47441 5.4 49 33 Tu 1 . - CDS 47496 - 47729 108 ## - Prom 47780 - 47839 4.4 + Prom 47712 - 47771 2.6 50 34 Tu 1 . + CDS 47820 - 49577 2075 ## COG0405 Gamma-glutamyltransferase + Term 49601 - 49654 14.4 + Prom 49675 - 49734 5.5 51 35 Tu 1 . + CDS 49854 - 50087 355 ## + Term 50123 - 50158 -1.0 + Prom 50103 - 50162 7.3 52 36 Tu 1 . + CDS 50346 - 51257 1017 ## COG2962 Predicted permeases - Term 51236 - 51283 16.0 53 37 Tu 1 . - CDS 51302 - 52186 1123 ## COG1307 Uncharacterized protein conserved in bacteria - Prom 52232 - 52291 7.2 + Prom 52219 - 52278 4.3 54 38 Tu 1 . + CDS 52411 - 52899 649 ## COG0262 Dihydrofolate reductase 55 39 Op 1 . - CDS 52935 - 53390 566 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 56 39 Op 2 . - CDS 53415 - 53756 451 ## NMB0002 hypothetical protein 57 39 Op 3 . - CDS 53805 - 55199 2297 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases - Prom 55445 - 55504 6.3 + Prom 55427 - 55486 8.3 58 40 Tu 1 . + CDS 55507 - 55815 242 ## BH0735 hypothetical protein + Term 55836 - 55873 9.1 - Term 55822 - 55860 9.3 59 41 Op 1 2/0.261 - CDS 55945 - 56607 1117 ## COG1434 Uncharacterized conserved protein 60 41 Op 2 . - CDS 56627 - 56989 592 ## COG1393 Arsenate reductase and related proteins, glutaredoxin family - Prom 57062 - 57121 2.6 + Prom 56968 - 57027 3.0 61 42 Tu 1 . + CDS 57113 - 57595 658 ## COG0526 Thiol-disulfide isomerase and thioredoxins + Prom 57767 - 57826 5.6 62 43 Op 1 28/0.000 + CDS 57993 - 58643 307 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 63 43 Op 2 . + CDS 58640 - 59557 1540 ## COG2177 Cell division protein + Term 59563 - 59604 5.1 + Prom 59569 - 59628 5.0 64 44 Op 1 . + CDS 59711 - 59881 116 ## 65 44 Op 2 . + CDS 59912 - 60391 300 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase + Term 60423 - 60470 11.6 - Term 60403 - 60467 18.0 66 45 Tu 1 . - CDS 60481 - 61044 879 ## D11S_0194 outer membrane protein 18/16 - Prom 61158 - 61217 4.1 + Prom 61167 - 61226 4.7 67 46 Tu 1 . + CDS 61325 - 61405 63 ## 68 47 Op 1 . - CDS 61396 - 62241 1036 ## Asuc_0907 hypothetical protein - Term 62265 - 62303 10.2 69 47 Op 2 1/0.391 - CDS 62312 - 62743 884 ## COG3794 Plastocyanin - Prom 62766 - 62825 2.8 70 48 Op 1 35/0.000 - CDS 62975 - 63742 299 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 71 48 Op 2 33/0.000 - CDS 63753 - 64799 1349 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component - Prom 64964 - 65023 1.6 - Term 65534 - 65595 5.4 72 48 Op 3 . - CDS 65606 - 66721 1914 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component - Prom 66762 - 66821 6.0 - Term 66872 - 66913 9.6 73 49 Op 1 . - CDS 66961 - 67155 302 ## gi|298370507|ref|ZP_06981823.1| hypothetical protein HMPREF9016_01845 74 49 Op 2 . - CDS 67203 - 69260 3399 ## COG0143 Methionyl-tRNA synthetase - Prom 69292 - 69351 6.6 - Term 69307 - 69366 23.0 75 50 Tu 1 . - CDS 69388 - 69663 482 ## NMO_1729 hypothetical protein - Prom 69721 - 69780 4.5 + Prom 69681 - 69740 3.8 76 51 Op 1 2/0.261 + CDS 69870 - 70295 624 ## COG1981 Predicted membrane protein 77 51 Op 2 . + CDS 70331 - 70801 740 ## COG2954 Uncharacterized protein conserved in bacteria + Term 70813 - 70867 15.0 - Term 70796 - 70859 22.0 78 52 Op 1 . - CDS 70879 - 72132 2257 ## COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase - Prom 72194 - 72253 5.0 - Term 72279 - 72319 11.5 79 52 Op 2 . - CDS 72341 - 73675 2056 ## COG2821 Membrane-bound lytic murein transglycosylase - Prom 73913 - 73972 5.3 + Prom 73915 - 73974 6.8 80 53 Op 1 7/0.000 + CDS 74019 - 74855 1185 ## COG0672 High-affinity Fe2+/Pb2+ permease 81 53 Op 2 9/0.000 + CDS 74910 - 76073 2012 ## COG2822 Predicted periplasmic lipoprotein involved in iron transport + Term 76088 - 76139 11.6 + Prom 76356 - 76415 4.0 82 54 Tu 1 . + CDS 76656 - 77927 2042 ## COG2837 Predicted iron-dependent peroxidase - Term 77979 - 78021 4.6 83 55 Tu 1 . - CDS 78033 - 78683 608 ## COG3547 Transposase and inactivated derivatives - Prom 78886 - 78945 5.4 - Term 78906 - 78938 2.5 84 56 Op 1 . - CDS 78954 - 79778 534 ## gi|298370517|ref|ZP_06981833.1| conserved hypothetical protein 85 56 Op 2 . - CDS 79845 - 80327 207 ## Cwoe_0949 hypothetical protein - Prom 80353 - 80412 5.0 86 57 Tu 1 . - CDS 80483 - 82141 1087 ## COG3505 Type IV secretory pathway, VirD4 components - Prom 82250 - 82309 5.2 - Term 82312 - 82357 13.0 87 58 Tu 1 . - CDS 82362 - 82610 324 ## gi|298370523|ref|ZP_06981839.1| hypothetical protein HMPREF9016_01862 - Prom 82733 - 82792 6.9 - Term 83005 - 83046 4.2 88 59 Op 1 . - CDS 83053 - 83463 481 ## gi|298370521|ref|ZP_06981837.1| hypothetical protein HMPREF9016_01860 89 59 Op 2 . - CDS 83477 - 83860 286 ## BMD_2613 hypothetical protein - Term 83861 - 83898 7.3 90 59 Op 3 . - CDS 83907 - 84314 488 ## BMD_2612 hypothetical protein - Prom 84337 - 84396 4.1 - Term 84686 - 84739 16.0 91 60 Tu 1 . - CDS 84741 - 85151 517 ## gi|298370525|ref|ZP_06981841.1| hypothetical protein HMPREF9016_01864 - Term 85446 - 85494 15.1 92 61 Op 1 . - CDS 85496 - 85906 267 ## gi|298370526|ref|ZP_06981842.1| conserved hypothetical protein 93 61 Op 2 . - CDS 85890 - 87755 2048 ## EUBREC_0600 hypothetical protein - Prom 87777 - 87836 5.7 - Term 87814 - 87845 -0.7 94 62 Tu 1 . - CDS 87888 - 90467 3656 ## COG0249 Mismatch repair ATPase (MutS family) - Prom 90532 - 90591 5.4 95 63 Tu 1 . - CDS 90914 - 91918 1601 ## COG4143 ABC-type thiamine transport system, periplasmic component - Prom 91948 - 92007 5.2 96 64 Op 1 . + CDS 91998 - 92645 916 ## COG1011 Predicted hydrolase (HAD superfamily) + Prom 92647 - 92706 2.4 97 64 Op 2 . + CDS 92728 - 93009 412 ## NMC0016 hypothetical protein + Term 93023 - 93062 8.0 98 65 Op 1 . + CDS 93092 - 94468 2369 ## COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) 99 65 Op 2 . + CDS 94489 - 95016 474 ## gi|298370533|ref|ZP_06981849.1| hypothetical protein HMPREF9016_01872 100 65 Op 3 . + CDS 95037 - 95438 124 ## XCV0616 putative secreted protein 101 66 Op 1 . + CDS 95770 - 96294 358 ## ECA2200 hypothetical protein 102 66 Op 2 . + CDS 96331 - 97155 285 ## COG3179 Predicted chitinase + Term 97225 - 97250 -0.5 103 66 Op 3 . + CDS 97261 - 99099 2811 ## COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains + Term 99120 - 99169 9.1 - Term 99106 - 99157 14.1 104 67 Tu 1 . - CDS 99334 - 99771 642 ## COG3787 Uncharacterized protein conserved in bacteria - Prom 99815 - 99874 4.9 + Prom 99957 - 100016 4.7 105 68 Tu 1 . + CDS 100097 - 101527 737 ## PROTEIN SUPPORTED gi|145634045|ref|ZP_01789756.1| 50S ribosomal protein L21 + Term 101555 - 101594 7.5 - Term 101546 - 101579 3.7 106 69 Tu 1 . - CDS 101736 - 102176 725 ## COG1970 Large-conductance mechanosensitive channel - Prom 102224 - 102283 4.4 107 70 Tu 1 . - CDS 102386 - 103171 1401 ## COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH) - Prom 103209 - 103268 6.3 + Prom 103509 - 103568 5.0 108 71 Tu 1 . + CDS 103696 - 105753 2501 ## COG0855 Polyphosphate kinase + Term 105930 - 105982 1.2 + 5S_RRNA 106143 - 106199 91.0 # AE015927 [R:2797299..2798807] # 5S ribosomal RNA # Clostridium tetani E88 # Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium. Predicted protein(s) >gi|289656329|gb|ADEA01000038.1| GENE 1 256 - 672 524 138 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298370436|ref|ZP_06981752.1| ## NR: gi|298370436|ref|ZP_06981752.1| membrane spanning protein [Neisseria sp. oral taxon 014 str. F0314] # 1 138 20 157 157 100 100.0 3e-20 MMKKILLAALMTAALAACSQETKQETQEAAHAVASDVSAAQTDAASAVDSATSAAKDAAD KAVSDAKETADKATADAKASADKAMADAKESAHKAMADAKETADKAKSAAKEAMKDSLDK AADATQKAADKMKDAANK >gi|289656329|gb|ADEA01000038.1| GENE 2 759 - 1739 1432 326 aa, chain - ## HITS:1 COG:NMB0012 KEGG:ns NR:ns ## COG: NMB0012 COG0861 # Protein_GI_number: 15675960 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane protein TerC, possibly involved in tellurium resistance # Organism: Neisseria meningitidis MC58 # 1 320 1 320 323 466 80.0 1e-131 MAAHPSVGTPLFYGVFFIAVCIMIAVDMLSLKKSGAHKISVKEALAWSCIWIAVSCGFAG WLYFELAGNPAYGAVAKEKVLEFFTGYILEKSLAVDNIFVFLMIFGYFKVPQQYQHRVLL YGVFGAIALRALMIFVGAVLVQQFEWILYLFGAFLLYTGIHMIKAGGDDEDEDLSKNKLL GWLQKHIPVSRVLNGEKFFTLENGKRIATPLLLVLVMIELSDVIFAVDSIPAVFAVTTDP FIVLTSNIFAILGLRAMYFLLADVADRFVFLKYGLAFVLSFIGVKMLAMHWIHIPISISL SVVFGALGASVLISLIYSKKLEKRGH >gi|289656329|gb|ADEA01000038.1| GENE 3 1812 - 2246 429 144 aa, chain - ## HITS:1 COG:NMB0013 KEGG:ns NR:ns ## COG: NMB0013 COG3399 # Protein_GI_number: 15675961 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 1 144 6 149 149 179 80.0 2e-45 MAHIVHLYCAIAFVGGVFFEMLVLSVMHTKRVSREARREVERAMSYRAVRVMPPVVAVLF LSGLVMVFDRYTDILRQPLASSFGTLLALKILLAFSVLVHFAIAVVKMHRRTLTVGWSKY IHAVVFTHMLFIVLLAKGMFYFSW >gi|289656329|gb|ADEA01000038.1| GENE 4 2436 - 2648 362 70 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298370439|ref|ZP_06981755.1| ## NR: gi|298370439|ref|ZP_06981755.1| hypothetical protein HMPREF9016_01777 [Neisseria sp. oral taxon 014 str. F0314] # 1 70 16 85 85 95 100.0 1e-18 MKSMFTKTFALLAVAASLSACAGMTQTQRNTATGAVIGGVAGNLIGGDTGSTLGGAALGG VIGSQVHRHR >gi|289656329|gb|ADEA01000038.1| GENE 5 2748 - 3644 1419 298 aa, chain - ## HITS:1 COG:NMA2226 KEGG:ns NR:ns ## COG: NMA2226 COG0142 # Protein_GI_number: 15795095 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Neisseria meningitidis Z2491 # 1 297 1 297 298 426 81.0 1e-119 MNPANELKVWQQKAQAQTELLLERFLPSENQVPHTLHEAMRYVTLGGGKRLRPLLVLAAS ELGDADQNAVEQAMAAIEMVHVYSLVHDDMPAMDNDSLRRGKPTCHVKYDEATALLVGDA LQTQAFDVLSRPTGLPAERQIAMLSTLAKASGSLGMAGGQAIDLANVGKAMNQAQLEQMH SLKTGALIRAAAVLGALACPDLDSDDVRTLDNYAAKLGLAFQVIDDVLDCEADTATLGKT AGKDSDNDKPTYVKLMGLQTARAYAETLTAEATALLEPFGAKALRLNQLAQFVTARKN >gi|289656329|gb|ADEA01000038.1| GENE 6 3628 - 3852 434 74 aa, chain - ## HITS:1 COG:NMB0262 KEGG:ns NR:ns ## COG: NMB0262 COG1722 # Protein_GI_number: 15676186 # Func_class: L Replication, recombination and repair # Function: Exonuclease VII small subunit # Organism: Neisseria meningitidis MC58 # 2 74 3 74 74 80 84.0 5e-16 MKKAPKSFEEALARLETLTQSMQSSEMPLEDALAAYQEGNELVRYCQTKLAEVEQKLQVL DAGELKELNLEPGE >gi|289656329|gb|ADEA01000038.1| GENE 7 3992 - 4858 1315 288 aa, chain - ## HITS:1 COG:NMA2224 KEGG:ns NR:ns ## COG: NMA2224 COG1162 # Protein_GI_number: 15795093 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Neisseria meningitidis Z2491 # 1 286 20 305 307 495 87.0 1e-140 MTDTAQIITSYGRRYIVRTPDGKTYEASTRKKRVDFACGDRVHIQTVNAEQAVIEDYLPR ESLLYRQDAWKTKLIAANVSQLLIVTAAVPSPSEALLQRALLAAEAAGIQAVIVLNKADL PETALWREKLKFYETLGYPVIETRALENADILRPVLQGHTNILLGQSGMGKSTLTNALLG NQTARTGDISTALDSGKHTTTHAQLYDLNEETQLIDSPGLQEFGLHHLQAADLLQYFPDL NHLVGQCRFHNCTHRAEPGCAVKAAADNQKVLAERVAFLQRITDELRR >gi|289656329|gb|ADEA01000038.1| GENE 8 5017 - 5634 955 205 aa, chain + ## HITS:1 COG:NMA2201 KEGG:ns NR:ns ## COG: NMA2201 COG2979 # Protein_GI_number: 15795070 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 202 1 202 204 242 69.0 4e-64 MNFNNLLNQILGTVQKGSQSVSNSPLNSFTGGALAAGLASMLMKKKNTQKLVKAGSVAAL GYIAYKGYQSWQQNRNQPELPQQAFEPAGQLAETHSHVILRTMIAAAASDGLIDEAEKQV IARESGTDAETAAWLAAEYEKPATVEELAAAVGNDEALAAETYLAARLVCADLSRKEIVF LTRLSQALGLDDQLVENLEKQLDLA >gi|289656329|gb|ADEA01000038.1| GENE 9 5735 - 7105 2390 456 aa, chain - ## HITS:1 COG:NMB0284 KEGG:ns NR:ns ## COG: NMB0284 COG0015 # Protein_GI_number: 15676208 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate lyase # Organism: Neisseria meningitidis MC58 # 1 456 1 456 456 846 93.0 0 MINPIAALSPLDGRYAKSVEALRPIFSEYGLMRARVKVELSWLKALAAEPKITEIPAFSD FTLAEIDKVIENFSLEDAAAVKAIEATTNHDVKAIEYWLKERFAGVPEVAAASEFIHFAC TSEDINNLSHALMLQEARETVILPKLAEIIEKLTGMAHDLAAVPMMSRTHGQPATPTTLG KETANIVYRLQRQFKNLQAQEFLGKINGAVGNYNAHMVAYPDVDWETHCRNFVEISLGLT FNPYTIQIEPHDYMAEFFQTLSRINTILIDFNRDVWGYISLGYFKQKVKAGEVGSSTMPH KVNPIDFENSEGNLGMANAVLGFLAEKLPVSRWQRDLTDSTVLRNMGVGVGYAVLGFAAH LRGLNKLEPNPAALAADLDATWELLAEPIQTVMRRHGVANPYEKLKDLTRGKGGITPEVL KVFIESLEIPAEAKSQLLALTPALYIGKAEELAKRI >gi|289656329|gb|ADEA01000038.1| GENE 10 7251 - 7850 447 199 aa, chain - ## HITS:1 COG:all7616 KEGG:ns NR:ns ## COG: all7616 COG2949 # Protein_GI_number: 17158752 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Nostoc sp. PCC 7120 # 1 156 15 173 228 70 31.0 2e-12 MLRKILWIGTGLVILWLLLFGWVWGNNFYRSRQPVESIAPADTAVILGISVHDEGRQNPC LISRVEAGVELWKAGKVKKLIMSGGMNHDGYVGAQSMMQTAEKMGIPREVIELEDHSETT HQNILYTAPMIEQDKSVVIVSSAYHIPRARWIAGKLWRRKNIQTFAGKMCFENQFPRHIE ELVRETGAIVKNGLLGYYW >gi|289656329|gb|ADEA01000038.1| GENE 11 7991 - 9094 1832 367 aa, chain - ## HITS:1 COG:NMA0224 KEGG:ns NR:ns ## COG: NMA0224 COG1186 # Protein_GI_number: 15793246 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor B # Organism: Neisseria meningitidis Z2491 # 1 367 1 367 367 685 99.0 0 MEAEVINQLNNTLNDLEKRSEDIRVYMDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGK ERKILEGIVLTLDNIASGIEDNRMLIEMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRM FNQPADPNNCFIDITAGAGGTEAEDWAGMLFRMYSRYAERKGFKIDILEEDDGEIAGINR ATIRLEGEYAYGLLRTETGVHRLVRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPAD LRIDTYRASGAGGQHINKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYEL EMRKRNEEKQALEEGKSDVGWGSQIRSYVLDSSRIKDLRTGYEVGNTKAVLDGDLDGFIE ASLKQGV >gi|289656329|gb|ADEA01000038.1| GENE 12 9248 - 10165 1268 305 aa, chain - ## HITS:1 COG:NMA0225 KEGG:ns NR:ns ## COG: NMA0225 COG1752 # Protein_GI_number: 15793247 # Func_class: R General function prediction only # Function: Predicted esterase of the alpha-beta hydrolase superfamily # Organism: Neisseria meningitidis Z2491 # 43 305 38 300 300 426 87.0 1e-119 MNKLTRRAALTALAALVLSACPSTRTPPPAVAPDQTAQLPQPQPSKPEAVIGLALGGGAS KGFAHIGIIKVLKENGIPVKVVTGTSAGSIVGSLYASGMSPDRLELEAEILGKTDLVDLT LSTSGFIKGEKLQNYINYKVGNRPIQQFPLKFAAVATDFETGKAVAFNRGNAGQAVRASA SIPNVFQPAVIGSRKYVDGGLSQPVPVSAAKAQGANFVIAVDISARPTKNVNQSFFSYLD QTLNIMSTSALHNELGKADIVIKPKVLELGSVGGFDQKNRAIQLGEQAARAALPEIKRKL AAYRY >gi|289656329|gb|ADEA01000038.1| GENE 13 10213 - 12069 232 618 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225088774|ref|YP_002660041.1| ribosomal protein S16 [gamma proteobacterium NOR5-3] # 364 593 12 233 312 94 29 3e-18 MIKKIFSWFESRVETYPESAPLTPEKGLLPFVWSGTEGVRKWILILGTMTAGIGIMEALL FQFMGKVVDWLGKYTPATLFAEKGWALAAMAAMMLFSIGWIFIASNVRLQTLQGVFPMRL RWNFHRLMLDQSLGFYQDEFAGRVSAKVMQTALALRDVVMTVADMVVYVLVYFITSGVIL VALDGWLLLPFIGWIAGFALVMRLLIPKLGRTAAAQADARSLMTGRITDAYSNITTVKLF SHGAREAAYAKQSMEEFMVTVHAQMRLATLLHTCSFIVNTSLTLSTAALGIWLWHQGQVG VGAVATATAMALRVNGLSQYIMWESARLFENIGTVSDGMGTLSKPHTILDKPQALPLKVA QGEIKFEHVDFSYEAGKPLLNGFNLTIRPGEKVGLIGRSGAGKSTIVNLLLRFYEPQSGT ISIDGQNIGDVTQESLRAQIGLVTQDTSLLHRSVRDNIVYGRPDATEAEMISAADRAEAS GFIPNLSDAKGRRGYDAHVGERGVKLSGGQRQRIAIARVMLKDAPILLLDEATSALDSEV EAAIQESLDKMMDGKTVIAIAHRLSTIAAMDRLIVLDKGRIIEEGSHTELLEKHGLYAKL WAHQSGGFLSEHAEWHQD >gi|289656329|gb|ADEA01000038.1| GENE 14 12223 - 12450 392 75 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298370449|ref|ZP_06981765.1| ## NR: gi|298370449|ref|ZP_06981765.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 62 1 62 75 99 100.0 8e-20 MSIKPLAAAAAFLLGGCIYTETPYGRMAVVDLPVRSETTINKNVTVNAPPGTTVIYQDSV PVGYPRPYPYRYYGY >gi|289656329|gb|ADEA01000038.1| GENE 15 12509 - 13090 1016 193 aa, chain - ## HITS:1 COG:NMA2221 KEGG:ns NR:ns ## COG: NMA2221 COG0632 # Protein_GI_number: 15795090 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, DNA-binding subunit # Organism: Neisseria meningitidis Z2491 # 1 193 1 194 194 285 84.0 3e-77 MIGRLKGILVEKNPPQAVIDVNGVGYEVDVSMQTFYRLPATGEAVQLYTQLVVREDAHLL FGFATADERATFRQLVKVSGIGAKTALGILSAMSADELAQAVAEEDVKRLSSAPGIGKKT AERMVLELRGKLVSAVSDGPAALSAAADGTDDIVSTLLALGYSEREAKAAVKGLPKGTDV GEGVRLALKNLLK >gi|289656329|gb|ADEA01000038.1| GENE 16 13297 - 14034 822 245 aa, chain - ## HITS:1 COG:NMA2219 KEGG:ns NR:ns ## COG: NMA2219 COG0797 # Protein_GI_number: 15795088 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipoproteins # Organism: Neisseria meningitidis Z2491 # 1 226 1 217 239 271 64.0 8e-73 MTFIRNTFLHHALFIALTAFAVGMLPAAANAADTVIRAEKLHSSANLSYKVAGKRYTPLT KVSSFSQTGKASWYGNQFHGRKTASGERYDMNALTAAHRTLPIPSYARVTNTKNGKSVIV RVNDRGPFHGSRVMDVSKAAAQKLGFISQGTTHIKIEQVLPGSETAMSDMPKKDIYVDLK SFGSESEALAYMNQTGRNLSSADMASKVSVEKRGGSYVVRMGPFAAQERADEAESRARMV VQNAI >gi|289656329|gb|ADEA01000038.1| GENE 17 14113 - 14577 574 154 aa, chain - ## HITS:1 COG:NMB0268 KEGG:ns NR:ns ## COG: NMB0268 COG0219 # Protein_GI_number: 15676192 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted rRNA methylase (SpoU class) # Organism: Neisseria meningitidis MC58 # 1 154 1 154 154 284 86.0 5e-77 MFTIVLYQPEIPPNTGNIIRLCANTGADLHLVKPLGFPLDSSKMKRAGLDYHEFAKLTVH ENFEDCLKALEGRRIFALTTKGKTRPDEASFKKGDVFLFGPETRGLPAEILDSLPAERKL RLPMRPGSRSMNLSNTAAVMLFEAWRQNDYQGGI >gi|289656329|gb|ADEA01000038.1| GENE 18 14641 - 15063 459 140 aa, chain - ## HITS:1 COG:NMA2217 KEGG:ns NR:ns ## COG: NMA2217 COG1040 # Protein_GI_number: 15795086 # Func_class: R General function prediction only # Function: Predicted amidophosphoribosyltransferases # Organism: Neisseria meningitidis Z2491 # 1 140 102 241 241 177 61.0 5e-45 MLPPLAGLMMRHAPDWLHGERIDFVLAMPLSKERRIYRGFNQSDELVSQLAAHYGWQVLP RGTVSRVHGAPQSTLKGSERLRNVKNAFSIENDVFKKRNILLIDDVVTTGSTFGELAQTL KKSGAEKVFCWSLARAQMKK >gi|289656329|gb|ADEA01000038.1| GENE 19 15362 - 16108 1189 248 aa, chain + ## HITS:1 COG:NMA2216 KEGG:ns NR:ns ## COG: NMA2216 COG0596 # Protein_GI_number: 15795085 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Neisseria meningitidis Z2491 # 1 245 10 254 312 353 75.0 2e-97 MPHSAKKVYLIHGWAANRHVFDDLIPRLPADWQIRALDLPGHGDAPFAEPFDIAVIAETF AAQIDAPAHILGWSLGGLVALYLAALYPDKIRSLCLTAGFARLTADADYPEGLANPALGK MVGAFRQDYAKHIKQFLQLQLLHTPNSAEILHKILPDLSRHGTPAALQAALDAVNQADAR PLLAHIRTPSLLVFGQKDAITPPRIGEYLNRHLTDSELVLIEKAAHAPFLSHADEFAERY RGFVEKAV >gi|289656329|gb|ADEA01000038.1| GENE 20 16434 - 17228 1056 264 aa, chain + ## HITS:1 COG:NMB0271 KEGG:ns NR:ns ## COG: NMB0271 COG0500 # Protein_GI_number: 15676195 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Neisseria meningitidis MC58 # 1 261 1 261 262 372 71.0 1e-103 MNPQDKRWQIHRHLAQDTDERLQIVRNAPKRILLVGADADISRSLLAARYPNAVFEEYDP RADFLQTAAAARKSGFWQKLTGKTVAQHCQALTDPLPEASADMLWANLSLPRTDEILPVL KNWANALKTDGLLFFTHFGRDSLTELTGRLKDAGIACETPTLIDMHDLGDMLADNGFYDP VTDTAKLELSYRKAATFRQDMETLGLWNALKFSDAQAADAFVDKIFETEGRLNITLETVY GHAVKKLVLPQGENVVRFFPKGQG >gi|289656329|gb|ADEA01000038.1| GENE 21 17355 - 19970 4059 871 aa, chain - ## HITS:1 COG:PM1453_1 KEGG:ns NR:ns ## COG: PM1453_1 COG1012 # Protein_GI_number: 15603318 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Pasteurella multocida # 1 460 2 461 461 733 80.0 0 MNAPAEHAASPAVAEVNGLVERGLQALEEFRALNQEQIDYIVAKSSIAALDKHGALAMHA VEETGRGVFEDKATKNLFACENVIRRLRDLKTVGVISEDDVTGITEIADPVGVVCGIVPT TNPTSTTIFKSLIALKTRNPIIFSFHPSAQQCSAHAAQIVRDAAIAAGAPENCIQWIEKP SMEGTSALMKHPGVATILATGGNAMVEAAYSCGKPALGVGAGNVPAYVEKTANIQQAAHD IVMSKAFDNGMICASEQAVIADKEIYKELVEEFKSYGVYFANKKEKAMLEDFIFGVTANC ANCGGAKLNSAVVGKPAAWIAEQAGFKVPEKTNIIIAECREVGPNEPLTREKLSPVLAML KADSTEQGLQFAEQMVAFDGLGHSAAIHTADQELAKTFGTRVKALRVIWNSPSTFGGIGD VYNAFLPSLTLGCGSYGKNSVGGNVSAVNLLNIKKVGRRRNNMQWFKVPAKIYFERDSIQ YLQDMKDCEKVMIVTDRSMVDLGFVDKVTHQLHQRKNKVTIQLFTDVEADPSVQTVYKGT DLMRSFQPDTIIALGGGSPMDAAKAMWLFYEQPQVDFEDLVQKFMDIRKRAFRFPELGRK AKFIGIPTTSGTGSEVTPFTVISDGDKKYPIADYSLTPTIAIVDPAFTMTVPAGVTADTG LDVLTHAVEAYVSVLANDFTDGLALQAIKLVFQYLERSYKHGAADPEAREHMHNASTIAG MAFSNAFLGINHSMAHKIGGKYHVPHGRANAILLPHVIRYNGTRPQKTATWPKYNYYKAD LKYQEIARTLGLPCATPAEGVESFARACHELAVNVGIKMSFKEQGIDEKTFIDGRKELAM LSFEDQCTPANPRLALVADMEEILTKAYYGE >gi|289656329|gb|ADEA01000038.1| GENE 22 20425 - 22623 3129 732 aa, chain - ## HITS:1 COG:NMB0287 KEGG:ns NR:ns ## COG: NMB0287 COG1199 # Protein_GI_number: 15676210 # Func_class: K Transcription; L Replication, recombination and repair # Function: Rad3-related DNA helicases # Organism: Neisseria meningitidis MC58 # 17 732 1 716 716 1347 92.0 0 MALSKYSDPQYSKMVSMLTDLEKNAIRDHYQNIGKNLPGFRPRASQREMIAAVANAFSRT LTREEGGEPPKREGESIAVIEGPTGVGKSLAYLLAGGIMAQTRGKRLIVSSATVALQEQL VDRDLPFLVEKSGLELTFALAKGRGRYLCPYKLYQLTQSNAQQNLLGFEAPAVLWDSKPK PEELKLLRDIADEFSARRFNGDRDTWPEKIDDTIWMKVNNDNYGCLKAACPNRPECPFYL ARDTLETVDVVVTNHDLLMVDISMGGGVILPDPENSFYCIDEAHHLPKKALSQFAAEHSW NQAVWALEKLPQVTGKIAALTDKGELANLADEAAAALLESLHEWQFHLAEEPSLSLGSSE NDRRTNSEPTWLWEDGKIPEGLETTVSNTAIAARSLYKHVNSLNDALSAARRDKDQNSAQ IDRLSTEFGVFRARVEQITATWDLLSTVPLEGEEPLAKWITRRADDKNDYIFNASPISSA SHLANSLWRRAAGAVLTSATLQSLGSFNLILRQTGLQWLPETTTLALESPFDFDAQGELY IPPVHASPKDPAAHTAAIVEWLPKLISPTEAIGTLVLFSSRKQMQDVALRLPEDYLPLLL VQGELPKAVLLQKHHQAIEEGKASIIFGLDSFAEGLDLPGTACVQVIIAKLPFAMPDNPI EKTQNRWIEQRGGNPFIEITVPEAGIKLIQAVGRLIRTEQDYGRVTILDNRVKTQRYGQQ LLASLPPFKRIG >gi|289656329|gb|ADEA01000038.1| GENE 23 22696 - 23181 611 161 aa, chain - ## HITS:1 COG:AGc3631 KEGG:ns NR:ns ## COG: AGc3631 COG4922 # Protein_GI_number: 15889288 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 36 161 40 163 163 113 45.0 1e-25 MKKIIAVLLTAVALSSTAAYAAPKAKPVHTKAAQTQEARNKANALAFYDLAFNQHKLQEA VSKYVGKTYIQHNPTVADGGQAFIDAFAPFLKENPGSRAEVKRIAAEDDLVFMHVFSQTS AQDRGEAVVDIFRFDRNGKIVEHWDVIQAVPEKTASGHSVF >gi|289656329|gb|ADEA01000038.1| GENE 24 23273 - 23929 924 218 aa, chain - ## HITS:1 COG:PA0741 KEGG:ns NR:ns ## COG: PA0741 COG2910 # Protein_GI_number: 15595938 # Func_class: R General function prediction only # Function: Putative NADH-flavin reductase # Organism: Pseudomonas aeruginosa # 1 216 1 212 213 144 41.0 9e-35 MKIAVIGATGYVGNAVVRELAGRGHEVTAFARNTDKVFQAQNVAAVSADVNAADFADKLA GFDAVVSAFNPGWNNPNIGADFTRGANSIVEAAKAAQVPYLLIVGGAGSLYAAPDLQVVD TPDFPKAIYDGANAARHLLTALLPRRDVNWSFVSPPARLGADGGFSEGKTGKYRLGKDDL LMDGEIPAGISVADLAVAIANDAEHKAHLFERFTVAAA >gi|289656329|gb|ADEA01000038.1| GENE 25 24106 - 25008 1004 300 aa, chain + ## HITS:1 COG:PA0123 KEGG:ns NR:ns ## COG: PA0123 COG0583 # Protein_GI_number: 15595321 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 5 299 1 298 302 174 37.0 2e-43 MEGRMQDIKPLLVFAAVLKHGSMNAAAAALGMTPSAVSQHINRLETLHGIKLLNRSTRSL SPTDAGRALGEYCRRLAATLTDTRTVIDNLKTEPVGELRISLTSSVIGSRAFQTVFARLQ TEFPKIRPVLNFSDTLDDLQHNQTDIAIRGGDRALDDPNLVARHLVTWPYSICAAPDYLD RHPPITHPSQLHAHRWLHFLPVRTTLQHGGESYFLDVADSIACTHLAAVCSLTESGFGLS LQVGGEVREKIAQGRLKTVLPEWTLPPVSLYLVTPYRVQSAKTEAAVRIFTESFAKEAEV >gi|289656329|gb|ADEA01000038.1| GENE 26 25005 - 25289 342 94 aa, chain + ## HITS:1 COG:NMB0361 KEGG:ns NR:ns ## COG: NMB0361 COG2827 # Protein_GI_number: 15676276 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease containing a URI domain # Organism: Neisseria meningitidis MC58 # 1 85 1 85 91 114 65.0 4e-26 MNVENWRVYLILCENGALYCDISNRPQERFAAHLAGKGAKYTRLNKPAAMRIVSDGLSKS EALKREIAIKKLTAGKKRVLWAEAEHANPHKQSQ >gi|289656329|gb|ADEA01000038.1| GENE 27 25476 - 25997 538 173 aa, chain + ## HITS:1 COG:NMA1936 KEGG:ns NR:ns ## COG: NMA1936 COG3245 # Protein_GI_number: 15794819 # Func_class: C Energy production and conversion # Function: Cytochrome c5 # Organism: Neisseria meningitidis Z2491 # 42 173 148 279 279 138 62.0 4e-33 MNKLLITLMMAASLAACSQETKQEAQEPAQTVASEAQNEAASTASSAASAAPETAAPAAE PASAEAKPEEKAEASAAEAKPEEKADASSAKADGKAVFEANCKMCHGGTIPGAPVVGKND DWAPRIKQGKETLHKHALEGFKAMPAKGGNASLSDDEVKAAVDYMANQSGAKF >gi|289656329|gb|ADEA01000038.1| GENE 28 26190 - 26393 145 67 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKICSVLMLGCLLTFPVIAQSSIFGGTAPVCPQGSRVQSVQSVKEGFWHWLWPVDYDPC RPPILAR >gi|289656329|gb|ADEA01000038.1| GENE 29 26935 - 28113 1993 392 aa, chain - ## HITS:1 COG:NMB0010 KEGG:ns NR:ns ## COG: NMB0010 COG0126 # Protein_GI_number: 15675958 # Func_class: G Carbohydrate transport and metabolism # Function: 3-phosphoglycerate kinase # Organism: Neisseria meningitidis MC58 # 1 392 1 403 403 651 95.0 0 MAFLKLTEQNVQGKTVLIRADMNVPFKDGKISDDTRIRASLASIKYCLDNGASVIVMTHL GRPTEGEFHPEDDVAPVAAHLGSLLGKDVKVLNDWRENKPALNAGDVVMLQNVRINKGEK KNDLELGKAYAALCDVFVNDAFGTAHRAQASTEAVAQAAPVACAGVLMAGELDALGKALK QPARPMVAIVAGSKVSTKLTILESLADKVDQLIVGGGIANTFLLAEGKAIGKSLAEHDLV EESKKIMAKMAAKGGSVPLPTDVVVAKAFAADAEAVVKDIADVAEDDMILDIGPKSAAAL AELLKAAGTVVWNGPVGVFEFDQFAGGTKALAEAIAQSKAFSIAGGGDTLAAIAKFGVTD QIGYISTGGGAFLEFLEGKELPAVAALEKRGA >gi|289656329|gb|ADEA01000038.1| GENE 30 28273 - 29832 2285 519 aa, chain - ## HITS:1 COG:BH0609 KEGG:ns NR:ns ## COG: BH0609 COG0369 # Protein_GI_number: 15613172 # Func_class: P Inorganic ion transport and metabolism # Function: Sulfite reductase, alpha subunit (flavoprotein) # Organism: Bacillus halodurans # 6 519 67 607 607 271 33.0 3e-72 MTDPIRSIHIAYGSESGNAQALAQDLHGQAFLQKYDLHLSDLNSLDLSALGADSLLLIIT SSFGEGGPPSNADGFSDGLRALGSLPVRYCVFGLGDTSYPAFCGFSKSLAAALAEKQAQA LIDPVEADLDYWTIYRQWLPLLQTALENPTGRPLTHRLSVTAYGRNTAYSAQVLSCERMA ASEPEVYRLRLDLTGSGIAYQAGDLLYVNVSQPDALLDEYAAYFGSEEARTLLKHKELRL LDKTLLRGLAKICDNAELKNLLKISNKKALEQYIHGHDLLDVLRTFDPDKKITLAQLAEA AADINPRAYSAATCGRTHPDHIEICVRRIRYRLDGRDYQGTASNLLCGIAAGSRIEVFAK SNTNFHLPASGNAPIVMIGAGTGIAPFVGFLQNLTSAAPRPESYLFFGERREAADFLYRE ELQAYLEQGVLTGLYTAFSRDSAEKYYVQDALRAQGRLVWALIERGAYFYICGGKNMAKA VEETLIRISEEIGGRTGGNMFDNIVADLTGAGKLLKDVY >gi|289656329|gb|ADEA01000038.1| GENE 31 30066 - 31382 1960 438 aa, chain + ## HITS:1 COG:RSc0387 KEGG:ns NR:ns ## COG: RSc0387 COG0612 # Protein_GI_number: 17545106 # Func_class: R General function prediction only # Function: Predicted Zn-dependent peptidases # Organism: Ralstonia solanacearum # 19 438 58 483 501 308 40.0 2e-83 MPRRILLLALSLAAVPVWAKTLSQTLPNGLKVIVKEDRRAPVAVSQIWYKVGSIDEQAGK TGLSHALEHMMFKGTPSVPSGEFNRRIAELGGQNNAYTNRSETVYYENIAAAKLPEVLKL EADRMQNLNFSDKDFANEMNVIREERRQRTEDNPSGKLWEHVYLNSFTVPALRAPIIGYM DDLHTLKADDLRAWYKQWYAPNNATLVIVGDVNAAATLKTAAKLFGGIPAKTLPARNNLT EKAEREPVTAQTTSAMTRQPIIALSYRVPKLEKSAGNMPYALDVLSDILGGNSSSRLDKN LVRGKQVALNADVGYDLFNREMPLFSIMAMPNDGVSEQSLLAAIRAEIKDIADNGVGSEE LKRVKTRMEASEIYARDSMVSQASLMGLLETRGFKYSDEAAIRRRLRQVSAADVQAAAKL LTDSRSSVVTVRPETARP >gi|289656329|gb|ADEA01000038.1| GENE 32 31452 - 32780 2130 442 aa, chain + ## HITS:1 COG:PA0371 KEGG:ns NR:ns ## COG: PA0371 COG0612 # Protein_GI_number: 15595568 # Func_class: R General function prediction only # Function: Predicted Zn-dependent peptidases # Organism: Pseudomonas aeruginosa # 21 439 63 477 495 246 34.0 5e-65 MQLKTLILALAVLPLTAQAAVNIQRWKTKEGTQILLVEHHENPIVDMAVSFKGAGSAFDP QNKSEVSEFTAALLTSGTKQLDEEAFNARTNNIAANLASASDLETSSVEMRSLSKPSVLK QSAALFNAALTRPRFDSAAFARLQKQGITTLQQEETDPGFIAGRTLTKLNYPDHPYGRGA DITVDTIRNVTLDDVRAFHRTRYGKDNAVVAIVGDISRRRAEKLAEDALKGLPAKSSAGN GALDVRNHPAQRRDIPFAGEQAQVLLGMPLIKRHDPDYYALVAGNYILGGGSFDSRLMKE LRDRHGYTYGVFSTLEPATQAGPFGISFSTQKKNTRAALADARAVVEKFIAEGPTEAELK QAKANITGSFPLRFDTNAKLLDYLSLIGVHDLPDDYLEAYPKAINKLTVAQVRDAWRRRV KFSDLNIVVVGADTKDTKPAKK >gi|289656329|gb|ADEA01000038.1| GENE 33 32792 - 34660 1447 622 aa, chain - ## HITS:1 COG:NMB0274 KEGG:ns NR:ns ## COG: NMB0274 COG0514 # Protein_GI_number: 15676198 # Func_class: L Replication, recombination and repair # Function: Superfamily II DNA helicase # Organism: Neisseria meningitidis MC58 # 1 622 1 616 766 1019 80.0 0 MTTPTAKQILHEVFGYPEFRGNQEAVVNTLARGESLLVLMPTGGGKSLCYQIPALMREGV AIVVSPLIALMNDQVAGLHAAGIEAACVHSGTTAEEAREVAEKLAQGRLKLLYVAPERLV SDRFLRFLDQQTISLFAIDEAHCVSQWGHDFRPEYQQLGMLAQRYPQIPRIALTATADAA TRADIKHHLCLENAPEYISSFDRPNIYYQVIEKNNGKKQLLDFIQKQMGGQSGIVYCLSR KKVEDVTGFLCEHGLDAIPYHAGLSMEMRETNQRKFTHEDNIIVVATVAFGMGIDKPDVR FVAHLDMPQSIEHFYQESGRAGRDGLPAASWLCYGLNDWVLLRERIAEGQTDETQKQIEM QKLDAMLSVCETADCRRVLLLRHFGENSQPCGHCDNCLHPPVRFNGTVLAQKLLSCVYRV GQRYAAGYVINVLRGKSDDWIRHNRHHELSTYGIGGDLSDKEWRSVIRQCISAGYLTVNP LLHQSLQLTENAKQVLKGGSEVWFRPLKREKAATQKPKEEWLRTEREERLWQALRSWRQQ KAKADEVPAYVVCGDKTLRDIVEKMPQTLEELHEIYGLGEAKISKFGLEILNVCGAANQS DDRSSENREAVLDELDEREQQL >gi|289656329|gb|ADEA01000038.1| GENE 34 34769 - 34870 66 33 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAGNVSAAKRKICILYHPYKNNFAYYPLISLPK >gi|289656329|gb|ADEA01000038.1| GENE 35 34830 - 35261 630 143 aa, chain + ## HITS:1 COG:no KEGG:NGO1942 NR:ns ## KEGG: NGO1942 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae # Pathway: not_defined # 1 143 1 140 140 162 55.0 4e-39 MQILRLAALTLPAILLASCASSGPSVSGDWESIGTISNGNIKVTLDKNSIKKNGVLATFR DKKVISKMSEESFSNTPKYKTAIGEWEVHCTNKTYRLTALQLLDERGQTISNQKYTAVSV RPMSVMNGTIIEKQFETVCGKKL >gi|289656329|gb|ADEA01000038.1| GENE 36 35351 - 35920 -42 189 aa, chain - ## HITS:1 COG:NMA0237 KEGG:ns NR:ns ## COG: NMA0237 COG0009 # Protein_GI_number: 15793255 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation factor (SUA5) # Organism: Neisseria meningitidis Z2491 # 1 189 12 200 200 263 73.0 1e-70 MLFPRILTASAQRKLKIHLKRGGLVAYPTESCYGLGCIPTFPRALSRVVSLKKRPQDKGM IVIGSRLEQLQSLLERPSEKTIFMLEREWPAPKTFLLPSRAGILPLLRGKGRNKLAVRVP AHQGARRLCKVLGTPLVSTSCNRAGKRPCKTEREVRRQFGRKVWVVSGLIGGQEKPSQII DGETGIRLR >gi|289656329|gb|ADEA01000038.1| GENE 37 35984 - 37255 1270 423 aa, chain - ## HITS:1 COG:NMB2151 KEGG:ns NR:ns ## COG: NMB2151 COG0151 # Protein_GI_number: 15677964 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylamine-glycine ligase # Organism: Neisseria meningitidis MC58 # 1 423 1 423 423 724 86.0 0 MKLLVVGSGGREHALAWKLAQSPKVETVFVAPGNAGTSIEPKLKNLTLTAHADLIDFCKK EHIAFTVVGPEAPLAAGIVDDFRAEGLKAFGPTQYAAQLESSKDFAKAFMKKYGIPTAQY QTFENAEKAHEYVNQKGAPIVIKADGLAAGKGVVVAATLHEAHVAIDDMLLGNKMGNAGA RVVIEDFLQGEEASFIVMVDGDNVLPMATSQDHKRLLDDDCGPNTGGMGAYSPAPVVTSD VYERAMNEIILPTVNGMKAEGHKFTGFLYAGLMIDKTGAPYTVEFNCRFGDPETQPIMSR LNSDLVDLLEAAIDGKLNSTIAEWNPQTAVGVVLAAENYPDTPKKGDIITGLDEADRIGK VFHAGTALNENGKVVTNGGRVLCVVGLGDNVAAAKTKAYQAVQKISFDGMQYRKDIADKA INR >gi|289656329|gb|ADEA01000038.1| GENE 38 37394 - 38008 273 204 aa, chain - ## HITS:1 COG:NMA0240 KEGG:ns NR:ns ## COG: NMA0240 COG1739 # Protein_GI_number: 15793258 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 3 203 2 202 203 339 77.0 2e-93 MDIATYKTIASTTQAEFKDKGSRFVAFAYPIQTLEEVKQYVSILREEHHKARHWCYAYRL GVDGTQFRANDDGEPAGSAGRPILGQIDSAGLTDVLVIVVRYFGGTLLGVPGLIHAYKTA AAEALTVAEVIEKNVEKTVWLRCKYPYLNEAIRITKQNQGNIIEQDLQLDCRLTVRLPLA CYTLCITAWENTRNIEIYTENPYS >gi|289656329|gb|ADEA01000038.1| GENE 39 38095 - 39030 593 311 aa, chain - ## HITS:1 COG:NMB2154 KEGG:ns NR:ns ## COG: NMB2154 COG2025 # Protein_GI_number: 15677967 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, alpha subunit # Organism: Neisseria meningitidis MC58 # 1 311 1 311 311 441 80.0 1e-123 MSVLIIAEHNNQQLNPATLHAVAASAKLGEVHLLVAGKDATSVVEAARQVQGISKVLVSD ASHYAEGLAEELAPLAVKLAGDYRYIAATATAFGKNLMPRIAALLGIPQISDLTEVVDAN TFVRPIYAGNAFETVQSQSEKVALTFRATAFNAAALVGNNAEIVTIDAIPAQNLSRFVSR NLSQSDRPELTQAKVVVSGGRALGSAENFNSVLTPLADILNAAIGASRAAVDLEYAPNDI QVGQTGKVVAPQLYIAVGISGAIQHVAGMQDSKVIVAINKDADAPIFNVADYGLVGDLFE IVPQLVDALKS >gi|289656329|gb|ADEA01000038.1| GENE 40 39046 - 39795 605 249 aa, chain - ## HITS:1 COG:NMB2155 KEGG:ns NR:ns ## COG: NMB2155 COG2086 # Protein_GI_number: 15677968 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, beta subunit # Organism: Neisseria meningitidis MC58 # 1 249 1 249 249 342 81.0 3e-94 MKALVAVKRVVDYNVKVRVKADGSDVDINNVKMSMNPFDEVAVEEAVRLKEAGKVNEIIA VSLGNKKCEETLRTALAMGADRAVHIETDKKLEPLTVAKLLKALADKENPQILLLGKQAI DDDANQTAQMLSALLNAAQGTFASKIELNADEVLVTREIDGGEETLALKLPAVISADLRL NEPRFVKLPNIMQAKKKPLEKLSPEELGISIVPLIRTIKVAEPRERQAGIKVGSVTELAD KLRNEAKVI >gi|289656329|gb|ADEA01000038.1| GENE 41 39843 - 40685 323 280 aa, chain - ## HITS:1 COG:NMA0243 KEGG:ns NR:ns ## COG: NMA0243 COG0859 # Protein_GI_number: 15793261 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Neisseria meningitidis Z2491 # 1 265 57 321 322 388 69.0 1e-108 MRWRKWRKQLFKSETWHEISRLKKELQQEKFDFVLDSQGLIKSALFARMADAQVKGLDKN SSRERLAALAYGQTFNVLKGKNAVWRNRELFAQVFNYQIPQLQRFGLSVPAEGRLKNLKT PYYVALHATSRDSKLWPVENWLDTLTKLHNDSGYSIYLPWGNNIEKQRAQVIAAELPFVV VCDKMNLLQAASLLEQSVGVIGVDTGLLHLANALDKPVVGIYTDTDPIKTGVQVSDWAKN LGGMGKIPVSEEVYQVFTDCVAAKKFDLEHKSKSASIETD >gi|289656329|gb|ADEA01000038.1| GENE 42 40890 - 41525 326 211 aa, chain - ## HITS:1 COG:NMB2157 KEGG:ns NR:ns ## COG: NMB2157 COG1335 # Protein_GI_number: 15677970 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Neisseria meningitidis MC58 # 1 211 1 211 211 362 81.0 1e-100 MIVSIDVDAQKTFSPLCPAELPVMEGNLIVEELNAQAKLADLRVMTKDAHSPSAKWLVEN PADMLKPTGLNDADLTWVSHAIVGTYGYELLDGLPQTKEYDYCVWKGVDPELHPYGACFH DIEEKLSTGLLEWLKCKGADTVIVGGLATDYCVKTTVLQLLKGGKWKVIVNAAACRGIAP DTVNAAWKEMSDAGAVILENTEKIYNYINNQ >gi|289656329|gb|ADEA01000038.1| GENE 43 41638 - 42318 655 226 aa, chain + ## HITS:1 COG:NMA0245 KEGG:ns NR:ns ## COG: NMA0245 COG1720 # Protein_GI_number: 15793263 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 1 218 1 219 226 342 74.0 4e-94 MRYTIEAIAIVHSPYKQKFGIARQPGLVPAAEVCIKLNSKFTADSVRGLESFEYVWISFI FHSVIGEGWSPLVRPPRLGGRQKMGVFATRSPHRPNHMGLSLLKLERIETGRPVKIYCSG ADLLDGTPVTDIKPYIPFIESKPDARSGFATEKPEQLNIEWAENCGKELSDKEREIISQS IAQDPRPAYQNIPERIYVMNILDYEVKFQIRNKTAFIISTDTYQKP >gi|289656329|gb|ADEA01000038.1| GENE 44 42405 - 43409 1110 334 aa, chain - ## HITS:1 COG:NMA0246 KEGG:ns NR:ns ## COG: NMA0246 COG0057 # Protein_GI_number: 15793264 # Func_class: G Carbohydrate transport and metabolism # Function: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase # Organism: Neisseria meningitidis Z2491 # 1 334 1 334 334 602 91.0 1e-172 MSIKVAINGFGRIGRLALRQIIKTEGIEVVAVNDLTPAEMLLHLFKYDSTQGRFQGAVEL KEDAIVVDGKEIKVFAKPNPEELPWGELGVDVVLECTGFFTSKTKAEAHIRAGARKVVIS APGGNDVKTIVYGVNQNTLDGSETVISAASCTTNCLAPMAAVLQREFGIVEGLMTTIHAF TGDQNTLDAPHRKGDLRRARAASLNIVPNSTGAAKAIGLVIPELNGKLDGSAQRVPVATG SLTELVSVLERPVTKEEINAAMKAAVSESYGYTEEQLVSSDVIGMEEGSLFDATQTRVIN VGDKQLVKTVAWYDNEMSYTCQLVRTLKYFATKI >gi|289656329|gb|ADEA01000038.1| GENE 45 43896 - 44813 1104 305 aa, chain + ## HITS:1 COG:NMA0263 KEGG:ns NR:ns ## COG: NMA0263 COG0774 # Protein_GI_number: 15793281 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-3-O-acyl-N-acetylglucosamine deacetylase # Organism: Neisseria meningitidis Z2491 # 1 301 1 301 307 539 90.0 1e-153 MLQRTLAKSINVTGVGLHSGERVALTLHPAAENSGIAFRRTDLDGKQGEIIRLSPYLIND TRLSSTVVTEDGVRVGTIEHIMSALSAYGVDNCLIELNAPEIPIMDGSSLPFIYLLQDAG IIDQKAQKRFLKILKPVEIKETGKWVRFTPYDGFKVTLTIEFDHPVFNRSAPTFEIDFAG KSYIDEIARARTFGFMQEVELMRAHNLGLGGNLSNAIVIDDTDVLNPEGLRYPDEFVRHK ILDAIGDLYIVGHPIIGAFEGYKSGHAINNALLRAILADESCYEWVEFPNDADLPSAFHE LPSVA >gi|289656329|gb|ADEA01000038.1| GENE 46 44890 - 45216 494 108 aa, chain - ## HITS:1 COG:NMA0273 KEGG:ns NR:ns ## COG: NMA0273 COG0545 # Protein_GI_number: 15793291 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerases 1 # Organism: Neisseria meningitidis Z2491 # 2 108 3 109 109 183 92.0 5e-47 MSLIIEDLQEGSGKEAVKGKEITVHYTGWLEDGTKFDSSLDRRQPLTITLGVGQVIQGWD EGFGGMKEGGRRKLTIPAEMGYGARGAGGVIPPNATLVFEVELLKVYD >gi|289656329|gb|ADEA01000038.1| GENE 47 45276 - 45506 254 76 aa, chain - ## HITS:1 COG:NMB0028 KEGG:ns NR:ns ## COG: NMB0028 COG3205 # Protein_GI_number: 15675968 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis MC58 # 1 72 1 71 72 97 69.0 5e-21 MLKTITFAVLHFSVAFGVSYSLTGSIGISGAVALIEPMANTVVFYFHEKVWNRYEIRKNG KRQESAGPLHQCVNCG >gi|289656329|gb|ADEA01000038.1| GENE 48 45903 - 47351 2294 482 aa, chain - ## HITS:1 COG:NMB0015 KEGG:ns NR:ns ## COG: NMB0015 COG0362 # Protein_GI_number: 15675963 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconate dehydrogenase # Organism: Neisseria meningitidis MC58 # 1 482 1 482 482 919 90.0 0 MKGDIGVIGLAVMGQNLILNMNDNGFKVVAFNRTVSKVDDFLNGAAKGTNIIGAYSLQDL VDKLEKPRKIMMMVRAGSVVDEFIEQLVPLLEQGDIIIDGGNANYPDSTRRTHELAAKGI RFIGAGVSGGEEGARHGPSIMPGGEEAAWPAVKPIFQAIAAKTPQGEPCCDWVGRDGAGH FVKMVHNGIEYGDMQLICEAYQFMKDGLGLSYDEMHRIFSEWNQTELDSYLIEITAAILG YKDENGEPLVEKILDTAGQKGTGKWTGINALDLGIPLTLISEAVFARCVSAFKDQRVQTG RFFGKTVTPVDGDKAAWVEALRQALLASKIISYAQGFMLIREASENNDWALNYGNTALLW REGCIIRSAFLGNIRDAYEANPDLVFLGSDPYFKGVLENCLPAWRKVVAKAIECGIPMPC MASAITFLDGYTTERLPANLLQAQRDYFGAHTYERTDKPRGEFFHTNWTGKGGDTASTTY DI >gi|289656329|gb|ADEA01000038.1| GENE 49 47496 - 47729 108 77 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKRFSGAKDKTVPYCGNCLTYTQHFGQNQNHPHFLTMSGMNCPKQNLPANNLKNKVFKTY PQNRDTLNIKIFLYFKF >gi|289656329|gb|ADEA01000038.1| GENE 50 47820 - 49577 2075 585 aa, chain + ## HITS:1 COG:NMB1057 KEGG:ns NR:ns ## COG: NMB1057 COG0405 # Protein_GI_number: 15676942 # Func_class: E Amino acid transport and metabolism # Function: Gamma-glutamyltransferase # Organism: Neisseria meningitidis MC58 # 31 585 53 606 606 719 66.0 0 MKYSFLLKNTLAALVLAACAQYSAEPLPSVAAESHAPEQGTGLTEQKLVYAKDFMAASAN PLATEAGYEILKRGGSAIDAMIAMQTTLGLTEPQSSGLGGGAFLVYWDNKAKKLTTFDAR ETAPKAATPELFLDENGKPMDFMNAVVGGRSVGVPGIPKLLEDVHKRYGKLPWASLFGKP IELAEKGFAVSPRMAKSIEQNRQYLQRYPQTAAYFLPEGKPLAAGTVLKNPEFAASVRLL AQKGSAPFYTGKPARNMVKAVTGARDNPGKISLADFKNYRVIERTPVCAPYREYEVCGMG APSSGAIALGEILGILQNQDMKTLGADNIHSWRWIGDASRVAFADRDYYVGDPAFVNVPT ETLIGQPYLKTRAGAIRGTDKALPKVEAGRFGALAAGKAVELPSTSHLVIVDKEGNVVSM TTSIENAFGSTLMANGYLLNNELTDFAFNPAGEDGKTVANSVAGGKRPRSSMAPTIVMKN GKPYLAVGSPGGSRIIGFVAKTLVAHIDWGMDIQTAISLPNMLNRGSTYEIEEKTAAAAK APALEQLGYKVQVRDLNSGVQGIVIGKNGLQGGADPRREGKVMGD >gi|289656329|gb|ADEA01000038.1| GENE 51 49854 - 50087 355 77 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKFAALLSLAVLSASVMAAPVAKKAEHKGKSKAKVEKVESAKTQSGAAESGLNDQSATT GTATPAPAAPGAASAVK >gi|289656329|gb|ADEA01000038.1| GENE 52 50346 - 51257 1017 303 aa, chain + ## HITS:1 COG:BH3866 KEGG:ns NR:ns ## COG: BH3866 COG2962 # Protein_GI_number: 15616428 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Bacillus halodurans # 8 301 4 300 308 192 38.0 9e-49 MTRPPSEEYRKGLIYAFSCYLLWGLFPLYWFPITHSGMGADQILAQRICWSAVFSSAVLL LMRQAGPLLRAVRDRRLLLAFVCSAAAISVNWLVYLWAITHDHVLDASLGYFIAPLVNVL LGRIFFKEKLGFVQIAAVLLAVTGILWLAVPAGRLPWVSLLLAASFGVYGLLRKLAPLDA LSGMTLETLLMLPFALGYLGLKAAQGGLVFGGLGAVPMAVLIGSGAVTVVPLLMFAAAAK RIALGDLGMIQYISPSIQFFLGLTLFGEAFSTQRFAGYLWVWLGVAVYVYGVVRTGKKRN KAV >gi|289656329|gb|ADEA01000038.1| GENE 53 51302 - 52186 1123 294 aa, chain - ## HITS:1 COG:FN1927_2 KEGG:ns NR:ns ## COG: FN1927_2 COG1307 # Protein_GI_number: 19705232 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 7 205 1 199 285 70 24.0 5e-12 MQGSYALYRCAVLSTSTSSLSDILDRDSPIQILHLGVEMEGRVAADGLEVNNAQYCGWRK NHLNEKVRTIPPTQETLSHTFQYLIEQGYHEAIITTLGSRLSDTAEVIRKIAREYKELKI YVVDTGMCCMPEGYFALEALRLLREGKRPPEIITYLERLKPRCNIFFGIPSTRPLVVNGT VARMGARLSDWLGLKTVLRFTDNELTRVGSVSDIDEMMDAVILSVMQAMRGKDSGDFVLA GLYSGSPEFYHHFANRFHNQTGLRLGDGVPVSPVVAVHVGFDCIGIGMVERIKD >gi|289656329|gb|ADEA01000038.1| GENE 54 52411 - 52899 649 162 aa, chain + ## HITS:1 COG:NMB0308 KEGG:ns NR:ns ## COG: NMB0308 COG0262 # Protein_GI_number: 15676226 # Func_class: H Coenzyme transport and metabolism # Function: Dihydrofolate reductase # Organism: Neisseria meningitidis MC58 # 1 159 1 159 162 213 72.0 2e-55 MQKITLIAACAPDRCIGIGNAMPWHLPEDFAFFKSYTLGKPVIMGRKTWESLPKKPLLGR RNIVISRRPDYPAAGAELAYGLKEAFALCAGAEEIIVMGGAQIYAQALPFATDLRITEVD VQVTNGDAFFPEFSAEQWRETAREQHVGAEGIRYAFVHYRCR >gi|289656329|gb|ADEA01000038.1| GENE 55 52935 - 53390 566 151 aa, chain - ## HITS:1 COG:NMA0248 KEGG:ns NR:ns ## COG: NMA0248 COG0454 # Protein_GI_number: 15793266 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Neisseria meningitidis Z2491 # 6 151 15 160 163 201 63.0 3e-52 MKTVPLRPEHIDPLAQALYTEWHDFAPWSSVGKIRAYYETCLQGSGLPVAFAAVDGQGRL LGSSALKRHDIAALPQYEYWLGDVFVLPPYRGKGVGKLLVEHCLGAAREMRLPALYLYTP DVQAVYEKYGWREIERRRHNGETVSVMKLDL >gi|289656329|gb|ADEA01000038.1| GENE 56 53415 - 53756 451 113 aa, chain - ## HITS:1 COG:no KEGG:NMB0002 NR:ns ## KEGG: NMB0002 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis # Pathway: not_defined # 1 112 19 129 131 95 54.0 6e-19 MKKTLITLTALFAASAASADSAEDALLNAQSAYRTALKAQNGNDGRIISLQTDLADAQRR AQKAQADIDRLQKELASAMSFKNEQASTLQQAGQRLDAAWQAVYGPGGTKAAR >gi|289656329|gb|ADEA01000038.1| GENE 57 53805 - 55199 2297 464 aa, chain - ## HITS:1 COG:NMA0250 KEGG:ns NR:ns ## COG: NMA0250 COG0008 # Protein_GI_number: 15793268 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Neisseria meningitidis Z2491 # 1 464 1 464 464 932 96.0 0 MTVKTRFAPSPTGYLHIGGVRTALFSWAFARHHKGEFLLRIEDTDLARSTAESVNIILDG MKWVGLDYDNADNVVYQTRRFDRYKEVIAELLEKGAAYYCYCSKEELEAMREKAEKEGTA TYDRRWRPEAGKTLPEIPADVQPVVRFKTPLDGVTQWTDLVKGEISIPNEALDDLIIARA DGTPTYNFCVVVDDYDMGVTHVIRGDDHVNNTPKQINILKAIGANLPEYGHLPMILNEQG KKISKRSGDTVAITDFGAMGILPEAMLNYLARLGWAHGDDEFFTMEQFVEWFDLKDVSPS PSRMDLKKLYWINGEHIKITPNEKLAELVKPRLALRDIYDTAKPALEDVLALVKDRAQDL NTLADECLYFYVKQTPAEADVQKHWDDEAAARMLRFAEHLEGLEDWNAEAIHDLFKPFCD EEGIKMGKLGMPLRLAVCGTAKTPSIDAVLALIGKEEVLKRIRS >gi|289656329|gb|ADEA01000038.1| GENE 58 55507 - 55815 242 102 aa, chain + ## HITS:1 COG:no KEGG:BH0735 NR:ns ## KEGG: BH0735 # Name: not_defined # Def: hypothetical protein # Organism: B.halodurans # Pathway: not_defined # 25 90 18 83 93 78 50.0 8e-14 MNEQNNQLPNQQPQYYQPQQQPGYQQQAPVISIGDWIVTSIVLAIPLVNLIMAFVWGFGG NTNPSKANYCKAWLIFIAAVIAFYVLLFLFVLGTGAASSRYN >gi|289656329|gb|ADEA01000038.1| GENE 59 55945 - 56607 1117 220 aa, chain - ## HITS:1 COG:NMA0251 KEGG:ns NR:ns ## COG: NMA0251 COG1434 # Protein_GI_number: 15793269 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 5 217 5 217 218 301 69.0 4e-82 MRFPLFHSRNGLRFYLLRGIALSILLVLAVFAGNVWQVYRTGNQTLPAAATADAAVVLGA AAWNKQPSPVFLERINHAIALYQSHRVGKIVFTGGTPKKGYMTEAEVGRRYALKQGIPAK NILFENTSRNTYENLRNIKPILRANSVDSIIIVSDPYHLARAQAIARDLDLNAEVSATPT TRFDAREKKGRFLFQESYLLFLYQFESWGDRIWDWITRNG >gi|289656329|gb|ADEA01000038.1| GENE 60 56627 - 56989 592 120 aa, chain - ## HITS:1 COG:NMA0252 KEGG:ns NR:ns ## COG: NMA0252 COG1393 # Protein_GI_number: 15793270 # Func_class: P Inorganic ion transport and metabolism # Function: Arsenate reductase and related proteins, glutaredoxin family # Organism: Neisseria meningitidis Z2491 # 7 118 6 117 117 163 75.0 7e-41 MPAPFILYHNPRCSKSRSAFDLLQERGIEAEVVRYLDTPPDLAALQDIFRKLGLESARGM MRVKDSLYQELGLDNPDLGDDALLRAVAEHPALLERPILVTPDKAAIGRPLENIEALLPE >gi|289656329|gb|ADEA01000038.1| GENE 61 57113 - 57595 658 160 aa, chain + ## HITS:1 COG:NMB0006 KEGG:ns NR:ns ## COG: NMB0006 COG0526 # Protein_GI_number: 15675954 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Neisseria meningitidis MC58 # 1 160 1 160 160 243 74.0 8e-65 MKTLTAAIIAAAAALGAQNASAADLQSWNSDTPQTQESLKAPVRVINLWATWCGPCRKEM PEMSSWYKAQKKGSVDMVGIALDNTENIGKFLKQTPVSYPVWRYTGADSRNFMKTFGNNV GVLPFTVVEAPKCGYKQTITGEVNAKKLTEAVNLAKGKCK >gi|289656329|gb|ADEA01000038.1| GENE 62 57993 - 58643 307 216 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 1 212 4 218 223 122 33 6e-27 MIRFEQVSKTYPGGFEALKNVSFRIKKGEMIFVAGHSGSGKSTVLKLISGITKPTSGKVW FNNQDLGALNDNQIGFMRQHIGIVFQDHKILYDRNVLQNVILPLRIIGYQPGKAEERARI AVEKVGLKGRELDDPVTLSGGEQQRLCIARAVVHQPSLLIADEPSANLDRAYALDIMELF KTFHEAGTTVIVAAHDETLMADYGHRILRLQGGRLA >gi|289656329|gb|ADEA01000038.1| GENE 63 58640 - 59557 1540 305 aa, chain + ## HITS:1 COG:NMB0008 KEGG:ns NR:ns ## COG: NMB0008 COG2177 # Protein_GI_number: 15675956 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division protein # Organism: Neisseria meningitidis MC58 # 1 305 1 305 305 491 80.0 1e-139 MSMIHYVSLHVESARTAFRQLLRQPVGTLLTLAMLAVAMTLPLALYLGVQSGQSVLGKLN ESPQITVYMETGASQADNDTVQNLLQRDARLTKIRFIGKQQGLEELQANLDQNLVSMLDS NPLPDVFIVTPDAAATPAQIQTLYGDLVRLPMVESATVDTEWVRTLYQINEFVRKILWFL AVTLGMAFVLVAHNTIRLQILSRKEEIEITKLLGAPASFIRRPFLYQAAWQSLLSAVVSL GLCSWLTGATRPLVDQIFKPYGLNIGWRFFTAGEIALVSVIVVALGVFGAWMAATQHLLG FKAKK >gi|289656329|gb|ADEA01000038.1| GENE 64 59711 - 59881 116 56 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPSERYLFVLLGVSVMLLTVSALKFQWVQVAEIKNKNRFNALIFIIMAIAVLLFFI >gi|289656329|gb|ADEA01000038.1| GENE 65 59912 - 60391 300 159 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 7 157 755 904 904 120 47 4e-26 MNPSLEKIARILTERRQTVTCAESCTGGLLAGALTSIAGSSQWFHQSFVTYSNKAKEDRL GVMPDTLLKHGAVSRETVYEMARGAKAVAGADYALSVSGIAGPGGGSAAKPVGTVWFGLA TPTESLERTALFEGDRESVRNQAVRFALDWLAENLTKNI >gi|289656329|gb|ADEA01000038.1| GENE 66 60481 - 61044 879 187 aa, chain - ## HITS:1 COG:no KEGG:D11S_0194 NR:ns ## KEGG: D11S_0194 # Name: not_defined # Def: outer membrane protein 18/16 # Organism: A.actinomycetemcomitans # Pathway: not_defined # 1 186 1 187 187 73 30.0 3e-12 MKKTLLTAFFLSAAASAVAAPLNTEGTFTGAAVEVGAGVSKSDVKNSSLKEKNKADVSVR GNYNTQFGASNWIGGAEVAVKPLHRTIGENSIGKAKQKVDASASYIQGYRLTNDVMAYGK VGYHYGRFEGGGRSRTNMNGLGYGVGAKYAVTPNVEVGAEWEQTRYKKDNLKIHNNSYMA TVGYRFK >gi|289656329|gb|ADEA01000038.1| GENE 67 61325 - 61405 63 26 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFRLKIYVYMRGVVFMIKGGLELAYS >gi|289656329|gb|ADEA01000038.1| GENE 68 61396 - 62241 1036 281 aa, chain - ## HITS:1 COG:no KEGG:Asuc_0907 NR:ns ## KEGG: Asuc_0907 # Name: not_defined # Def: hypothetical protein # Organism: A.succinogenes # Pathway: not_defined # 2 274 4 275 275 275 51.0 9e-73 MLTITTCRTYPQPPQNLLPLADILNRQSVPTRFDIWQNRPSDPFLLPLCAWDYAAEPQAF RRWLDDAEKSGQQFVNPPPLIRWNMNKKYLCDLAAWGADVIPSVFAPPENQAVQNILRER GWQEAVIKPAVGQSGRAVARITAASPPPDWPAYPQGVIVQPYIREIEQAGETSLIFFNGT FSHAVLRRPPQGEWRANSAYGVEIRPAAPSETVVRTARSVLDLLPQMPVYARVDGTIIGG RLLLNELELIEPALYLHTAQGAAERFAVVLVSLLFSVPSQE >gi|289656329|gb|ADEA01000038.1| GENE 69 62312 - 62743 884 143 aa, chain - ## HITS:1 COG:BMEII0965 KEGG:ns NR:ns ## COG: BMEII0965 COG3794 # Protein_GI_number: 17989310 # Func_class: C Energy production and conversion # Function: Plastocyanin # Organism: Brucella melitensis # 20 143 25 146 146 84 39.0 7e-17 MKKSLFLLMLTASLGAYAANHEVKMLDNGKDGSMVFEPGYVNAKVGDTVTFKAANKGHWV QSKALPDGVADFLSEDGKDFTLKLDKEGVYVYTCPPHRMMNMSGVIQVGKPVNKAKAQAV VDELESRAMQSKGRLKKYMQQVK >gi|289656329|gb|ADEA01000038.1| GENE 70 62975 - 63742 299 255 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 233 1 237 245 119 32 5e-26 MLKLENVHIRRGDYVVADNIDLTLEQGKVYSVLGPNGTGKSSLMKTIFGEVAHKGTIRYG NEALSKIHLQSWRKRIGYMPQDTAAEASLTALEVVLLGRMDALHMHVGDELLHEAASIMA ELGIGHLAHRDVMRLSGGQRQLVMFAQVMLRRPEILMLDEPVSALDMHHQLNLLERVVQY THEHNLVTLMVLHDLSLAAQFSDGVILLGEGKVQAQGAPQDVLQADMIGRLYKVDIELLY DSKGLPVIRPMRQTA >gi|289656329|gb|ADEA01000038.1| GENE 71 63753 - 64799 1349 348 aa, chain - ## HITS:1 COG:MA2149 KEGG:ns NR:ns ## COG: MA2149 COG0609 # Protein_GI_number: 20090992 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Methanosarcina acetivorans str.C2A # 8 348 12 351 355 271 47.0 1e-72 MNDSVVAEIVRNQRRLEGKRWLIVLMFLIIAAVSFLFDIATGPAMTDTLPVAEVVNVLLG KPEVDEMNRLIVMDLRLPIAVMALVVGAALGVGGAEIQTLLNNPMASPYTLGLAAAAGLG ASAVIAFGGFGLPETVAVPIGAFVMTMLASGILFLFASARRFNSAMLVLVGIALLFLFQS ILSLIQFIAAPEISQQILFWLFGSLTKATWETVIITAAVTAVCVILLSRDVWKLTALRLG EERAVGLGINLQLLRLKTLVLVAVMTATAISFVGVIGFIGLVAPHVARILLGEDQRFFLP GAMLAGAAFLSVASVLSKVIIPGALFPVGIVTSFVGVPFFFWIVLTKR >gi|289656329|gb|ADEA01000038.1| GENE 72 65606 - 66721 1914 371 aa, chain - ## HITS:1 COG:YPO1343 KEGG:ns NR:ns ## COG: YPO1343 COG0614 # Protein_GI_number: 16121623 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Yersinia pestis # 27 371 38 378 378 261 40.0 1e-69 MKFQRLSAFALAAALSCATLAAYAKPVQLTDVNGRKVTVDLPAKRVVLGFYYQDYMAIGG KDALNNVVGFSKAVWADWAPPSWAAFSKAVPKLNQLADVGEVEVGTFSVEKVLALKPDLL ILADWQYKALGSDLDRINKAGIPIVVLDYNAQTVAKHVQSTKLIGTLTGQQQKADKLAAD YKRIADTIQARVKKANLPKPKVYVEFGNKGPAEHSVTFGKSMWGSMATLVGGNNIAASSV EFYGPINPEKVLAAKPDVIVITGRETELKKSPTAMVMGWGIPKAEAEKRLAGFAKRAGWA NLPAIKNNRLYAAYHANSRTLSDSASIQFMAKAIYPQLFKDFNPEKTYMDFYRQNLPVVP NGTFYLYPKGQ >gi|289656329|gb|ADEA01000038.1| GENE 73 66961 - 67155 302 64 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298370507|ref|ZP_06981823.1| ## NR: gi|298370507|ref|ZP_06981823.1| hypothetical protein HMPREF9016_01845 [Neisseria sp. oral taxon 014 str. F0314] # 1 64 1 64 64 104 100.0 2e-21 MFNLSKPVLKEIELLDAAGLSVGAIVTALRLKFPIELIDRDDDELEEAVRLTVNPPRKAP SLSR >gi|289656329|gb|ADEA01000038.1| GENE 74 67203 - 69260 3399 685 aa, chain - ## HITS:1 COG:NMA0275_1 KEGG:ns NR:ns ## COG: NMA0275_1 COG0143 # Protein_GI_number: 15793293 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA synthetase # Organism: Neisseria meningitidis Z2491 # 1 566 1 566 566 1162 97.0 0 MTRKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECHYCCADDTHGTPVMLAA QKQGIAPEDMIAKVREEHLADFTGFFIGYDNYYSTHSPENKQFSQDIYRALKANGKIESR VIEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKP ELRESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQAEALNKMKEWLGEGEETTLSDWDI SRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHFI GKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNP EWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDVS GSTLLAKLAAESETIAEQYENREYARALRDIMALADAVNEYVDANKPWELAKQEGQDERL HEVCSELINAFTMLTAYLAPVLPQTAANAARFLNLDAITWANTCETLGEHAINKYEHLMQ RVEQKQVDDLIEANKQSIQTTPAPAAEEGKYEKVAEQASFDDFMKIDMRVAKVLNCEAVE GSTKLLKFDLDFGFEKRIIFSGIAASYPNPAELNGRMVIAVANFAPRKMAKFGVSEGMIL SAATAEGKLRLLDVDAGAQPGDKVG >gi|289656329|gb|ADEA01000038.1| GENE 75 69388 - 69663 482 91 aa, chain - ## HITS:1 COG:no KEGG:NMO_1729 NR:ns ## KEGG: NMO_1729 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 1 78 2 79 81 82 44.0 5e-15 MKQFEINGGVKKAINDYLLAHGTDLKTAMDSESANGEIAAIIHNGLPAMVRKIYSLEKMK TFFWTKKDLMVEFVAMRLAASDKKKPAKAKR >gi|289656329|gb|ADEA01000038.1| GENE 76 69870 - 70295 624 141 aa, chain + ## HITS:1 COG:NMB0310 KEGG:ns NR:ns ## COG: NMB0310 COG1981 # Protein_GI_number: 15676228 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis MC58 # 1 141 2 142 142 173 69.0 8e-44 MYLWFKLLHIFFMISWFAGLFYLPRIYVNLAQVDPQAEPAEYERLLGMAQRLYKFMSPLG IGALVCGIVIPFANGWWGFGWVHVKLLLGLLLLGYQHVCRAHLRRFCEHACRHSHKWYRV FNEIPVLMMVAALYLVVFKPF >gi|289656329|gb|ADEA01000038.1| GENE 77 70331 - 70801 740 156 aa, chain + ## HITS:1 COG:NMA2178 KEGG:ns NR:ns ## COG: NMA2178 COG2954 # Protein_GI_number: 15795049 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 155 1 155 158 224 70.0 3e-59 MTVEIERRFLLKHDGWRNQASAPQTLHQGYISVEKERTIRVRIIGDRAWLTLKGYISDLS RSEFEYEIPLEHARQMMDGMCPFKMEKRRYRVPYGGFVFEIDEYGGDNAPLIVAEIELPS EDARFEKPDWLGEEITSDGRFTNAYLSKHPYSAWEK >gi|289656329|gb|ADEA01000038.1| GENE 78 70879 - 72132 2257 417 aa, chain - ## HITS:1 COG:NMA0258 KEGG:ns NR:ns ## COG: NMA0258 COG0766 # Protein_GI_number: 15793276 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine enolpyruvyl transferase # Organism: Neisseria meningitidis Z2491 # 1 417 1 417 417 722 91.0 0 MDKLKITANGPLNGEITVSGAKNAALPLMCAGLLTAGTLRLKNVPMLADVKTTQKLLQGM GARVLTDNVHEFEINGGTVNNTCAPYELVKTMRASILVLGPTLARFGEAQVSLPGGCAIG SRPVDQHLKGLETMGAEITIEHGYVKAKGRLKGTRVVMDVVTVGGTENLLMAATLAEGTT VLENCAIEPEVVDLAECLVKMGAKISGIGTPVMTVEGVEELHGCEHSVVPDRIEAGTFLC AVAMTGGKVVLRRAAPKTMEAVLEKLTEAGAVIEAGDDWISIDMKQRPKAVDIRTVVHPG FPTDMQAQFMAMNAIAEGSCRVVETIFENRFMHVPELNRMGANITTEGNTAYVKGVETLS GATVMATDLRASASLVIAGLIAGGETIVERIYHLDRGYEHIEKKLGRVGAKIERVSG >gi|289656329|gb|ADEA01000038.1| GENE 79 72341 - 73675 2056 444 aa, chain - ## HITS:1 COG:NMA0279 KEGG:ns NR:ns ## COG: NMA0279 COG2821 # Protein_GI_number: 15793296 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-bound lytic murein transglycosylase # Organism: Neisseria meningitidis Z2491 # 5 444 3 441 441 655 77.0 0 MNTNKQIFRTLLLGLTAALLSACPSKSIKKPQTGTTIPVVKGPDRPTGTPHPPGTTVTPG GGASYTAVRHGDLPHWATQHFAQSLKSFKLGCEKLKNREGWQDVCTQAAQTGEHHFSAKA FFEKYFTPWQVSANGSQAGTVTGYYEPVLHGDTRQTAKAKFPIYGIPHDFVSVPLPANLR GSKSTVRVRATGQNSGVIDEAGQYAADLSQFPITARTTALKGRFAGGRFLPYHNRNQING GALNGKAPILGYADDPVELFFMQIQGSGRLKTPSGKYIRLGYADKNEQPYVSIGRYMADK GYLPLGQTTMQGIKAYMQQNPQRLAEVLGQNPSYVFFRELPGDSDEGPLGALGTPLLGEY AGAVDRHYITLGAPLFVATAHPLTGHALNRLIMAQDTGSAIKGAVRVDYFWGYGDKAGET AGKMKAKGYVWLLLPNGMQPEYRP >gi|289656329|gb|ADEA01000038.1| GENE 80 74019 - 74855 1185 278 aa, chain + ## HITS:1 COG:NMA0280 KEGG:ns NR:ns ## COG: NMA0280 COG0672 # Protein_GI_number: 15793297 # Func_class: P Inorganic ion transport and metabolism # Function: High-affinity Fe2+/Pb2+ permease # Organism: Neisseria meningitidis Z2491 # 1 269 1 269 279 435 89.0 1e-122 MLIAFLIMLREGIEAALIVGIVAGFLKQSGHSRLMPKVWLGVALAALMCLGIGYGIHSVT GEIPQKEQEFVVGVIGLVAVAMLTYMILWMKKAARSMKQQLQDSVQTALNRGNGQGWALV GMAFLAVAREGLESVFFLLAVFQQSPTWSMPVGAVLGLLAAVIIGALIYQGGMRLNLAKF FRWTGAFLIVVAAGLVAGSLRALHEAGVWNHLQEVVFDSSKYLHEDSPLGVLLGGFFGYT DHPTQGEVLAWLLYLVPVMIWFLHGSRPAAVQRSSESH >gi|289656329|gb|ADEA01000038.1| GENE 81 74910 - 76073 2012 387 aa, chain + ## HITS:1 COG:NMA0281 KEGG:ns NR:ns ## COG: NMA0281 COG2822 # Protein_GI_number: 15793298 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted periplasmic lipoprotein involved in iron transport # Organism: Neisseria meningitidis Z2491 # 1 387 1 388 388 596 84.0 1e-170 MKKLNITALSVMLALGLTACQPPEAEKSAPAASGASSANADGTVNVGVNDTACEPMELTV PSGQVVFNIKNNSGRKLEWEILKGVMVVDERENIAPGLSDKMTVTLLPGEYEMTCGLLTN PRGKLVVTDSGFKDTGNEADLEKLAKPLADYKVYVQGEAKELVAKTKAFTDAVKAGDIEK AKSQFASARTHYERIEPIAELFNELDPAIDAREDDFKDKTEDAAFTGFHRIEHALWVKKD VSGVKDIADKLMKDVESLQKEIDALSFPPNKVVGGAAVLIEEVAGSKISGEEDRYSHTDL SDFQANIEGAQKIVELFRPMIAEKNKALLEKVDANFKQVTDILTKYKTKDGFETYDKLSD EDRKTLQAPINALAEDLSQLRGTLGLK >gi|289656329|gb|ADEA01000038.1| GENE 82 76656 - 77927 2042 423 aa, chain + ## HITS:1 COG:NMA0282 KEGG:ns NR:ns ## COG: NMA0282 COG2837 # Protein_GI_number: 15793299 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted iron-dependent peroxidase # Organism: Neisseria meningitidis Z2491 # 5 412 2 410 421 703 83.0 0 MSQDNNSQPTQPTKRTLFKTVLAAGAAGAAGWFAGKQQGETAAETRLNEHSPQAYPCYGT HQAGITTPHQLFGIMCAFDVTAKDPKQLENLFRTLTARIEFLTQGGEYQDGDEKLPPAGS GLLGKTFRPDGLTITVGVGSSLFDDRFGLKDKKPRHLQEMRDFPNDRLQKSWCDGDLSLQ ICAFTPETCQAALRDIIKNTAQTAVIRWSIDGWLPKAEPGAIAARNLLGFRDGSGNPDVS DPKIADQVLWTGIAANSQDEPAWAKNGSYQAVRLIRHFVEFWDRTPLQEQTEIFGRRKYS GAPMDGKKESDTADFAKDPDGKTTPKDSHMRLANPRDPEFMKKHLLYRRAFNYSRGLAAN GQLDVGLVFICYQANLADGFIFVQNLLNGEPLEEYISPFGGGYFFILPGVAKGGFLGQGL LGL >gi|289656329|gb|ADEA01000038.1| GENE 83 78033 - 78683 608 216 aa, chain - ## HITS:1 COG:NMA1185 KEGG:ns NR:ns ## COG: NMA1185 COG3547 # Protein_GI_number: 15794129 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Neisseria meningitidis Z2491 # 1 216 98 318 318 392 92.0 1e-109 MLAFFAQMMTQKEDWQTMLYHPPTEAEEVLEALVNRRNQLVDMRAAEKNRLHQVHETQVE SVKQLIAHFDRLIDELDKQIDDHTHTHFDGKAQVAEQIKGIGSITTATLMAMLPELGRLS HKRIASLVGIAPHPRESGETKFKSRCFGGRSAVRKALYMATVVATRFEPLIRDFYQRLLS KGKPYKVAVTACMRKLLTILNARMRDYFAENGIRTA >gi|289656329|gb|ADEA01000038.1| GENE 84 78954 - 79778 534 274 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298370517|ref|ZP_06981833.1| ## NR: gi|298370517|ref|ZP_06981833.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 274 15 288 288 494 100.0 1e-138 MAANEFKVSNQENSKEYIKDQVINDYIENLRKYNGYTEKGKDITIFGAHYGLQGQFWCDM YVDYVMEESFGKQNARQMIGGFSARTENSKNNYQKIGGWNDSANYTPQKGDQIFFLLPTK DKTRTVNHTGVVTDVDLEKGIVYTIEGNTSAKPRDGSGTTVREKQYNLNHPSIKGYGTPN WDIEIKDRLDNLEQNENTKENNSPADKLQALIQGLKNDTDGTFATKALAENPDVVANFRA EQAEALKENRQQQETAQNTPQMQEERSYGGRSFG >gi|289656329|gb|ADEA01000038.1| GENE 85 79845 - 80327 207 160 aa, chain - ## HITS:1 COG:no KEGG:Cwoe_0949 NR:ns ## KEGG: Cwoe_0949 # Name: not_defined # Def: hypothetical protein # Organism: C.woesei # Pathway: not_defined # 47 160 33 141 141 64 30.0 1e-09 MQYKKLLIIPTIALSIFSAGCTVNAKEPVSTINDSYMNETTNYKFNFRAANGTIYCGAES QLEDAEVIGVECFTRIENEPILPRGECELEWGESFFVGQNGKASLVCSSDFPFNPRATIL KSGESIKGDGWQCTASESTLTCTNRDKHGFKINKQSQELF >gi|289656329|gb|ADEA01000038.1| GENE 86 80483 - 82141 1087 552 aa, chain - ## HITS:1 COG:XFa0016 KEGG:ns NR:ns ## COG: XFa0016 COG3505 # Protein_GI_number: 10956727 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirD4 components # Organism: Xylella fastidiosa 9a5c # 16 540 6 534 656 406 41.0 1e-113 MISLKHKIFLVLLGLLVALFAGIYLSGWILLTWVHSHQSTEFTTIFQYLYHYGDHPVHGT KIKISAFIGFLAPFLLLIFFAAALLVRKEENLYGKARFAKSSELQKAGFFKSTENSIVVG KQGNQYLFYSGQQFALLAAPTRSGKGVGIVIPNLLSYQGSMVVLDIKQENFDLTSGFREK HGQKVYLFNPFAEDQCTHRWNPLSYVSEDPNFRISDLSSIANMLYPTGENPKDRFWLNQA QNVFMALALFLLDKRKQDGSTLCSIGALYRLSNGDGRDLRDYFREISEAPFVSKQCKSAF AGILGQPEETFGNIMATFKEPLLPWLNPIVDAATSADDFLLTDVRKQKMTIYIGIQPNKL AEARLIINLFFSQLINLNTKELPQSNKELRYQCLLLMDEFTSIGAVDIIAKSVSYIAGYN IRLFPIIQSLAQLDSVYGKEVSRTMVTNHALQILYTPREQQDAADYSEMLGYTSVKKSNV TKGREKSVSIGDERRALMLPQELKAMPEDKEIFVYEGLSHPVMCEKIRYYKDSSFTKRLQ GKIKVPRLNVSA >gi|289656329|gb|ADEA01000038.1| GENE 87 82362 - 82610 324 82 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298370523|ref|ZP_06981839.1| ## NR: gi|298370523|ref|ZP_06981839.1| hypothetical protein HMPREF9016_01862 [Neisseria sp. oral taxon 014 str. F0314] # 2 82 34 114 114 137 97.0 2e-31 MVPPSEIEEVYEISTYALYQGYEFWIKWASENEYLLNGNNNLTLMDKLNFKRVDKYGYEK LVKKDEVDLVYEKKELITDFFD >gi|289656329|gb|ADEA01000038.1| GENE 88 83053 - 83463 481 136 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298370521|ref|ZP_06981837.1| ## NR: gi|298370521|ref|ZP_06981837.1| hypothetical protein HMPREF9016_01860 [Neisseria sp. oral taxon 014 str. F0314] # 1 136 1 136 136 251 100.0 1e-65 MAIKKGIYTTYLGKEYRVLRRDGFARLISNDPKDIADGFLEREPEKNLNPRIFFKMVSPS EIGDVYEISIFCLYHGFEFHITYDDGENYVLVSDYSPLVEKFNFTRIDKFGYEKTVPKDE VDLVYEKKELITDFFD >gi|289656329|gb|ADEA01000038.1| GENE 89 83477 - 83860 286 127 aa, chain - ## HITS:1 COG:no KEGG:BMD_2613 NR:ns ## KEGG: BMD_2613 # Name: not_defined # Def: hypothetical protein # Organism: B.megaterium_DSM319 # Pathway: not_defined # 8 122 268 379 385 64 32.0 1e-09 MRFTYGLKQTINNFALDYEGSRFTQALADGQDRYLIFEGRLTGTKNHIDIPRGERFGGQH TDNLPCTLNGFTACRSDEILPEYKIPYKQERYPEHGSTISVIENGIKREMLMFDEEKLQF VPYKNKE >gi|289656329|gb|ADEA01000038.1| GENE 90 83907 - 84314 488 135 aa, chain - ## HITS:1 COG:no KEGG:BMD_2612 NR:ns ## KEGG: BMD_2612 # Name: not_defined # Def: hypothetical protein # Organism: B.megaterium_DSM319 # Pathway: not_defined # 1 126 2 121 125 63 38.0 2e-09 MRNDTYAIYNRKEYRIFLSEGMAELISNDVKDLSNGFKEYRPERNHTIPILTKTVSPSEI EEVYEISTYALYQGYEFWIKWASENEYLLDGNNNLTLMDKLNFKRVDKYGYEKLVKKDEV DLVYEKKELITDFFD >gi|289656329|gb|ADEA01000038.1| GENE 91 84741 - 85151 517 136 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298370525|ref|ZP_06981841.1| ## NR: gi|298370525|ref|ZP_06981841.1| hypothetical protein HMPREF9016_01864 [Neisseria sp. oral taxon 014 str. F0314] # 1 136 1 136 136 236 100.0 2e-61 MSIKSGIYTIYYGKEYRIARIENHYEIISNDEKDLNKGFIEYKPEKNLNPRIFFKMVSPS EIGDVYEISTFCLYHGFEFHITYDDGENYVLVSDYSPLVEKFNFTRIDKFGYEKTVPKDE VDLVYEKKELITDFFD >gi|289656329|gb|ADEA01000038.1| GENE 92 85496 - 85906 267 136 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298370526|ref|ZP_06981842.1| ## NR: gi|298370526|ref|ZP_06981842.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 136 1 136 136 241 100.0 1e-62 MKLRNDTYTTYLKKEYRVWNNQGLANLVSNDESDLSNGFIEYDPDGNNNPRIFIKMVPPS EIGDVYEISTFAIYKGFEFYVLNEYDGKYTLSTIDKVFVEKLGFFQYEFGVFHKEVSKED LDLIFEKKKLIENFFD >gi|289656329|gb|ADEA01000038.1| GENE 93 85890 - 87755 2048 621 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_0600 NR:ns ## KEGG: EUBREC_0600 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 429 613 2 183 183 99 33.0 3e-19 MDLGHSRNRDLEQNQPQQQEMSHEQRVGQLYNDIDAQSRKNSEVAQVFNRYSGPEQLELK NQIAHAAASATRSPDPHITSMFVSNDNRHIAGWVNEHFMFKVPFPEHSRKEEQPQPIQQR VEKVEIGSRKYEMTVTIASTEAIAPSTGETGSHPATPSGITQEKNPIGKSGDWLEENLTS PVRNGYEEYVKRPLADALKIEADDSEITRTFKQGATAVGGAALGVAESVGEGITGAGNLA KEGASLAYDKASLFAYEHLDIDIGIGSEDDARMAKERSDAQLETLSRVWEHTKDSAQEYI DNPAKLKTDLSDGLDSMKAGAERWAEAVGNADLNRTVEESKPLTDAATLLVGGAGLVKGG MALRRKALHAAEETAARAKAEFYRETLQDIGDWGKDKNLSPDSFAYKNLAESLARENMPF EDFKALTRTHMDDMTQEQIGQMKRIRDDVPMIDDKTTVTKVMPYEYLEGFASGRNNQIGG FIARQSDTAHLSGHNLKQTIDNFALDYEGSRFTQALADGQDRYLIFEGRLIQTQNEIGVP RGHRFEGTYKDGLPCTLNGFIACRSDEILPEYKVTNARYPDDGATISVIENGIKREVLMF DKNKKQFIPMKNERMINEIKK >gi|289656329|gb|ADEA01000038.1| GENE 94 87888 - 90467 3656 859 aa, chain - ## HITS:1 COG:NMB2160 KEGG:ns NR:ns ## COG: NMB2160 COG0249 # Protein_GI_number: 15677973 # Func_class: L Replication, recombination and repair # Function: Mismatch repair ATPase (MutS family) # Organism: Neisseria meningitidis MC58 # 1 857 1 859 864 1375 83.0 0 MSKSAVSPMMQQYLAIKSQHADKLVFYRMGDFYELFLDDAVEAAKLLDITLTTRGQMDGV PIKMAGVPFHAAEQYLARLVKMGKSVAVCEQVGEVGAGKGPVERKVVRIVTPGTLTDAAF LEDKETNRIAAVNADKKHIAIAWASLQSGEFKTKLTTADKLADELARLQAAEILLPEGKS LPNGFQTTSANITRLNSWQFAADAGAKLLTEYFGCQDLHGFGLDGKEHEAAVGAAGALLN YIRLTQNLMPQHLDGISLETDSQYIGMDAATRRNLEITQTLSGKKSPTLFSILDGCATHM GSRLLALWLHHPLRSRAHIRARQEAVDALGSQYETLQGRLKNIADIERIAARIAVGNARP RDLAALRDSLFALSEIELSAEGSSLLETLKAVFPETLPVAETLKAAVMPEPAVWLKDGGV INQGYSAELDELRHIQNHGDEFLLDLEARERERTGLSTLKVEFNRVHGFYIELSKVQAEQ APADYQRRQTLKNAERFITPELKTFEDKVLTAQEQALALEKRLFEALLKDIQTTLPQLQK AAKAAAALDVLSTFAATAAERGFVCPEFADYPVIHIENGRHPVVEQQVRHFTANHTRLDH KHRLMLLTGPNMGGKSTYMRQVAHIVLMAHTGSFVPADAAQIGPIDQIFTRIGASDDLAS NRSTFMVEMSETAYILHHATDQSLVLMDEVGRGTSTFDGLALAHAIAEHLLQKNKSFSLF ATHYFELTKLPEAYATAVNMHLSALEQGQDIVFLHHIEPGPASKSYGIAVAKLAGLPNRA LKAAQKHLDELEAQAAAVRPQLDIFSMMPSENRVEEEEIECADNPPADALVEALAQIQPD NLTPREALDALYRLKQILI >gi|289656329|gb|ADEA01000038.1| GENE 95 90914 - 91918 1601 334 aa, chain - ## HITS:1 COG:NMB0041 KEGG:ns NR:ns ## COG: NMB0041 COG4143 # Protein_GI_number: 15675981 # Func_class: H Coenzyme transport and metabolism # Function: ABC-type thiamine transport system, periplasmic component # Organism: Neisseria meningitidis MC58 # 12 334 11 333 333 489 77.0 1e-138 MKLHVFSGIAALALCLNAWGQAEVRLAVHKTFKLPKETIARFEKANDAKVSVITAGSGNE MLNKLILSKANPIADAVYGLDNANIGKARQAGILAERQPESAPVSASMPVALAVDYAYVA LNYDKEWFEKHKLPLPKTMQDLAKPEYKDLLVVPNPATSSTGLTFLLANIGGMGEEAAFK WWAQMRQNGVKVANGWSEAYYTDFTRNGGAYPLVVSYATSPAAEVHFSKGKFSVPPTGNL FLKGGVFRQVEGAAVLKGAKQPVLAAKLVQWLQSGEVQKALPTEMWVYPAVKNTPLPKVF EFAQAPQHNDSPGRADIDAKQKQWLSRWTRTVLK >gi|289656329|gb|ADEA01000038.1| GENE 96 91998 - 92645 916 215 aa, chain + ## HITS:1 COG:NMB0040 KEGG:ns NR:ns ## COG: NMB0040 COG1011 # Protein_GI_number: 15675980 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Neisseria meningitidis MC58 # 2 210 4 212 237 309 72.0 3e-84 MNETVWLFDLDNTLHNADAGIFYLINRRMTEYLAGRLNLPEEEASRLRQDYWHRYGATLA GLQIHHPEIDVGDFLRQSHLLDEILAKLTPIEGTEETLGRLKGRKTVFSNGPSFYVRAVV NALGLEKYFDLLAGTEDFGLLYKPDRHAYLNVCRLLATHPAACIMVDDSADNLHAAKMLG MRTVWFGRHAHPLPFTDAAVSGMAALAEWGGNVGP >gi|289656329|gb|ADEA01000038.1| GENE 97 92728 - 93009 412 93 aa, chain + ## HITS:1 COG:no KEGG:NMC0016 NR:ns ## KEGG: NMC0016 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 3 86 240 325 325 107 56.0 1e-22 MRYLAMILAAAALAGCTWETYQNADGHTSLRQKYEKGTRVYYQDGTYSRNMRYNQFRPEQ HAIRPAMNAERDVRGTNWQKPQNKTKQPPNNTA >gi|289656329|gb|ADEA01000038.1| GENE 98 93092 - 94468 2369 458 aa, chain + ## HITS:1 COG:NMB0038 KEGG:ns NR:ns ## COG: NMB0038 COG1207 # Protein_GI_number: 15675978 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) # Organism: Neisseria meningitidis MC58 # 1 453 1 453 456 819 94.0 0 MSTTPLNIVILAAGKGTRMYSKMPKVLHRIGGKPMVERVIDTAAALNPQNICVVIGHGKD QVLDTVKRDVVWVEQTEQLGTGHAVKTALPHLSAEGRTLVLYGDVPLIDTATLETLLEAA GSEVGLLTDVPADPTGLGRIIRDSQGSVTAIVEEKDADAAQKAVREINTGILVLPNAKLE NWLNSLSSNNAQGEYYLTDLIAKAVADGIKVHPVQVRASHLAAGVNNKLQLAELERIFQT EQAQELLKAGVTLRDPARFDLRGRLKHGQDVVIDVNVVLEGDIEIGDNVEIGANCVIKNA KIGANSKIAPFSHLEDCEVGQNNQIGPYARLRPQARLSDDVHVGNFVEIKNAAIGKGTKA NHLTYIGDAEVGSKTNFGAGTIIANYDGVNKYKTVIGDEVRIGSNCVLVAPVKLGNKVTT GAGSTITRNVEDNKLALARARQTVIEGWVRPEKGDKKL >gi|289656329|gb|ADEA01000038.1| GENE 99 94489 - 95016 474 175 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298370533|ref|ZP_06981849.1| ## NR: gi|298370533|ref|ZP_06981849.1| hypothetical protein HMPREF9016_01872 [Neisseria sp. oral taxon 014 str. F0314] # 1 175 1 175 175 294 100.0 1e-78 MEKHTDIERARNLIIETSGLMAAYKDNSEKIVNNVRHELDKSLNEQRRMIIQMIREEITD EISQTVHSYVEDMEETRNRMREQVREFNSYLHKVQQENNKISSRSVLITSLTLATLVVGG IALFWFYANALQSKKLDADMITRINRADIVRCENELCARTSKAGENGYRVIQKRY >gi|289656329|gb|ADEA01000038.1| GENE 100 95037 - 95438 124 133 aa, chain + ## HITS:1 COG:no KEGG:XCV0616 NR:ns ## KEGG: XCV0616 # Name: not_defined # Def: putative secreted protein # Organism: X.campestris_vesicatoria # Pathway: not_defined # 4 116 16 128 162 73 36.0 2e-12 MKKLIAIFLLIPLAAYSNARPLSFSGTWLYTDQVGDTVGGKELVLKQTGNLVTGIWNEGI STGSGGSGKLKGYVKGNKLFLNYCSDEGNNWYKSCPEYENNGSYFIKKNNKIIEYDMEDN KLYKKGNEFILTK >gi|289656329|gb|ADEA01000038.1| GENE 101 95770 - 96294 358 174 aa, chain + ## HITS:1 COG:no KEGG:ECA2200 NR:ns ## KEGG: ECA2200 # Name: not_defined # Def: hypothetical protein # Organism: E.carotovora # Pathway: not_defined # 57 167 130 239 249 75 35.0 7e-13 MVKYFLYGFSSFLFLTNAYAGSQPESLAKIIYEKEIDLNQDRIKDKLVIEENTEGKRNLK ILVEDSKKQWNTVIENRNMVLCKDCGGVSTGDPLVSVEAKRNVFEITQEGGSRERWTSVY RFQYSPKLSTWILRKARLNVYDTVTGKNEIRRKSINSSKPVKLQDFNYDEFFYN >gi|289656329|gb|ADEA01000038.1| GENE 102 96331 - 97155 285 274 aa, chain + ## HITS:1 COG:DRA0117 KEGG:ns NR:ns ## COG: DRA0117 COG3179 # Protein_GI_number: 15807785 # Func_class: R General function prediction only # Function: Predicted chitinase # Organism: Deinococcus radiodurans # 24 179 46 196 275 117 42.0 2e-26 MHEEKILQEAMSNGISSRKELANLLAQVAHESDNFSTMEENLNYSAKRLAQLWPKRYADG NHNPNEKALNIAKNPEKIANDVYSNRMGNGNSNSGDGYRYRGRGYIQLTGRSNYEMATKE LQIDLINKPELAATSEVAAKIAILYWEKRVPDSHKENVRQATKYINGGLNGLADRQNKYD EYYQKLTPEYLDKIQKGQQHSSNAQYDDFSALVSNLINDKDGSFTKQLLADNKDIVDAFN AKVQEKIKQEEQQTIAQEAQREVVEKSFGGRSFS >gi|289656329|gb|ADEA01000038.1| GENE 103 97261 - 99099 2811 612 aa, chain + ## HITS:1 COG:NMA0276 KEGG:ns NR:ns ## COG: NMA0276 COG0449 # Protein_GI_number: 15793294 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains # Organism: Neisseria meningitidis Z2491 # 1 612 1 612 612 1082 89.0 0 MCGIVGAIRANHNVVDFLTDGLKRLEYRGYDSSGIAVNTDGKIKRVRRVGRVQLMEDAAR EKGVFGHIGIGHTRWATHGGVTEPNAHPHISGGMIAVVHNGIIENFEAERERLQSLGYTF ESQTDTEVIAHSVNHEYTQNGGKLFEAVRAATARFHGAYAIAVMAQDKPEEMVVARMGCP LLVALGDQETFIASDVSAVIAFTRRIAYLEDGDIALLSANGIDKLIDKTGAETQRTVKVS ELSLASLELGPYSHFMQKEIHEQPRAIADTAEVFLDGGFEPENFGANAREVFDGIRSIKI LACGTSYYAALTAKYWLESIAKMPTDVEIASEYRYRDVIADPEQLVITISQSGETLDTME ALKYAKSLGHKHSLSVCNVMESALPRESELVLYTRAGAEIGVASTKAFTTQLVVLFGLAV TLGKQRGLISEEQAHAYIEELRQLPGSVQHALNLEPQIAAWAQKFAKKNSALFLGRGIHF PIALEGALKLKEITYIHAEAYPAGELKHGPLALVDENMPVVVIAPNDSLLDKVKANMQEV GARGGELFVFADLDSNFNATDAVHVIRAPRHVGVLSPIVHTIPVQLLSYHTALARGTDVD KPRNLAKSVTVE >gi|289656329|gb|ADEA01000038.1| GENE 104 99334 - 99771 642 145 aa, chain - ## HITS:1 COG:YPO3467 KEGG:ns NR:ns ## COG: YPO3467 COG3787 # Protein_GI_number: 16123613 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 8 144 10 145 147 114 38.0 4e-26 MQPIPANITQFFQTNHVVSIAACADGTIWSACCFYVFDEPAARLIVLTSQKTKHGRMMAV NPHIAGTVAGQPGSITKISGIQFTARARLLEDEAAKKPALSLYCKAHPAARAMKSDVWAL DLDTVKFTDNKLVFAQKTHWQREEG >gi|289656329|gb|ADEA01000038.1| GENE 105 100097 - 101527 737 476 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|145634045|ref|ZP_01789756.1| 50S ribosomal protein L21 [Haemophilus influenzae PittAA] # 13 453 7 446 456 288 38 8e-77 MNGSFTESLHYWVNKINGPMWDGLIFVLLGVGLFFTLATGFVQFRLFGRSIREMLGGRKQ GDDPHGITPFQAFVTGLASRVGVGNIAGVAIAISVGGPGAVFWMWLVALIGMSSAFAESS LAQLFKIRDYDDHHFRGGPAYYITQGLGQRWLGILFALSLIFCFGFVYESVQANSIVAAM EVAWGWDKHAVGVALMILTAPIIFGGIRRVARWSEMIVPVMATLYLLMALYIVATNIGMV PKVFDMIFSNAFKFDAAGGGLLGGLISQTMVMGIKRGLYSNEAGQGSAPNAAAAAEVKHP VSQGMIQMLGVFVDTMIVCSCTAFIVLMSDLPADSGLSGVQLTQAAIVSHVGGWGADFLA VVLFMFAFSTIIGNYAYAESNVKFIKSHWLILSLFRMGVLGMVYFGAVNSVPLVWDMADM AMGTMAWINLIAILLLSPLVFLLLKDYTAKLKMGKDPQFKLSEHPGLKRKIKSDIW >gi|289656329|gb|ADEA01000038.1| GENE 106 101736 - 102176 725 146 aa, chain - ## HITS:1 COG:BMEI1605 KEGG:ns NR:ns ## COG: BMEI1605 COG1970 # Protein_GI_number: 17987888 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Large-conductance mechanosensitive channel # Organism: Brucella melitensis # 6 146 10 141 144 124 55.0 6e-29 MSIASEFKEFIMRGNVVDLAVGMVVGTAFSGIVKSLVDDVIMPPIGILIGGVDFSNLFIT LKDGTPAPEAGYASLAAAKAAGAVTLNVGLFINTIISFLIIAAAIFVVVKLLNSLKKKEV PVEEAPAEPSEEVLLLREIRDSLSKK >gi|289656329|gb|ADEA01000038.1| GENE 107 102386 - 103171 1401 261 aa, chain - ## HITS:1 COG:NMA2152 KEGG:ns NR:ns ## COG: NMA2152 COG0623 # Protein_GI_number: 15795023 # Func_class: I Lipid transport and metabolism # Function: Enoyl-[acyl-carrier-protein] reductase (NADH) # Organism: Neisseria meningitidis Z2491 # 1 260 1 260 261 467 94.0 1e-131 MGFLQGKKILITGMISERSIAYGIAKACRDQGADLAFTYVVDKLEERVRKMAAELGSELV FRCDVASDDEINQTFAGLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEIS AYSLPALAKAARPMMQGHNGSIVALTYLGAVRAIPNYNVMGMAKASLEAGIRFTAACLGR EGIRCNGISAGPIKTLAASGIADFGKLLGHVAQQNPLGRNVTIEEVGNAAAFLLSDLSSG ITGEITYVDGGYSINALSVEE >gi|289656329|gb|ADEA01000038.1| GENE 108 103696 - 105753 2501 685 aa, chain + ## HITS:1 COG:NMA0555 KEGG:ns NR:ns ## COG: NMA0555 COG0855 # Protein_GI_number: 15793549 # Func_class: P Inorganic ion transport and metabolism # Function: Polyphosphate kinase # Organism: Neisseria meningitidis Z2491 # 1 684 1 684 685 1230 86.0 0 MPEQNRILCRELSLLAFNRRVLAQAQDPSVPLLERLRFLCIVSSNLDEFFEVRMAWLKRE QKLRPHERLDNGTTPSETIAAVAAEAHALIREQYQLFNEVLQPELGKQGIHFYRRRNWTP GQQKWIEQYFDAELLPILTPIGLDPSHPFPRPLNKSLNFAVELEGTDAFGRPSGMAIVQA PRILPRVVPLPAELCEGGSGFVFLSSILHAHVGKLFPGMAVKGCHQFRLTRDSDLTVDEE DLKNLRAAIQNELHDREYGDGVRLEVADTCPAHIHDFLLAQFKLNESELYQVKGPVNLVR LHSVPDLVDRPDLKYPPRSAGRLKALRKNGSIFKLAKQSPILLHHPYQSFDPVVQMIREA AADPDVLAVKMTIYRTGSNSELVRALMKAALAGKQVTVVVELMARFDEANNVNWAQQLED AGAHVVYGVFGYKVHAKMALVIRREDGALKRYAHLGTGNYHQGTSRIYTDFGIITADNQI TADVNTIFMEITGLGKPGRLNKLYQSPFTLHQMVIERISRETEHAKAGKPARIIAKMNSL IEPSVIEALYQASAAGVQIDLIVRGMCTLRPGVKGLSDNIRVRSIIGRQLEHSRVYCFHN NGADDTFISSADWMGRNFFRRIEVATPIETQALKERVISEGLDMALQDNTHAWLMQPDGT YERCRPSENEKPVGLQDGLWKMYGR Prediction of potential genes in microbial genomes Time: Thu May 26 13:56:41 2011 Seq name: gi|289656328|gb|ADEA01000039.1| Neisseria sp. oral taxon 014 str. F0314 cont1.39, whole genome shotgun sequence Length of sequence - 6819 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 2, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 1/0.000 + CDS 3 - 314 245 ## COG1734 DnaK suppressor protein + Term 351 - 420 20.1 + SSU_RRNA 776 - 2274 99.0 # AY005023 [D:1..1501] # 16S ribosomal RNA # Neisseria sp. oral clone AP085 # Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria; environmental samples. + TRNA 2369 - 2445 92.7 # Ile GAT 0 0 + TRNA 2468 - 2543 93.7 # Ala TGC 0 0 + LSU_RRNA 2900 - 5789 98.0 # CP001050 [R:1263410..1266299] # 23S ribosomal RNA # Neisseria gonorrhoeae NCCP11945 # Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria. + 5S_RRNA 5885 - 5993 99.0 # CP000381 [D:61720..61828] # 5S ribosomal RNA # Neisseria meningitidis 053442 # Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria. + Prom 6030 - 6089 4.1 2 1 Op 2 . + CDS 6193 - 6483 375 ## COG1555 DNA uptake protein and related DNA-binding proteins + Term 6535 - 6566 4.1 - Term 6523 - 6554 4.1 3 2 Tu 1 . - CDS 6589 - 6732 60 ## COG4105 DNA uptake lipoprotein Predicted protein(s) >gi|289656328|gb|ADEA01000039.1| GENE 1 3 - 314 245 103 aa, chain + ## HITS:1 COG:NMB0056 KEGG:ns NR:ns ## COG: NMB0056 COG1734 # Protein_GI_number: 15675994 # Func_class: T Signal transduction mechanisms # Function: DnaK suppressor protein # Organism: Neisseria meningitidis MC58 # 1 103 36 138 138 166 94.0 9e-42 QDELIQNASVTTGHLQEHESAPDPADRATQEEEYALELRTRDRERKLLAKVQATIRSIDE GDYGFCADTGEPIGLKRLLARPTATLSVEAQERRERMKKQFAD >gi|289656328|gb|ADEA01000039.1| GENE 2 6193 - 6483 375 96 aa, chain + ## HITS:1 COG:NMB2017 KEGG:ns NR:ns ## COG: NMB2017 COG1555 # Protein_GI_number: 15677842 # Func_class: L Replication, recombination and repair # Function: DNA uptake protein and related DNA-binding proteins # Organism: Neisseria meningitidis MC58 # 1 95 50 148 148 96 58.0 1e-20 MKHILFGILALLAVPLALAAVNINTATAAELEALPGIGPAKAKAIVAYRQQNGQFKTVED LKKVKGIGEGIFSKLKDEASVAPPAAKKAVPAVKQQ >gi|289656328|gb|ADEA01000039.1| GENE 3 6589 - 6732 60 47 aa, chain - ## HITS:1 COG:NMA0907 KEGG:ns NR:ns ## COG: NMA0907 COG4105 # Protein_GI_number: 15793873 # Func_class: R General function prediction only # Function: DNA uptake lipoprotein # Organism: Neisseria meningitidis Z2491 # 1 46 221 266 267 79 73.0 1e-15 MELAYKKLGKPQLAADSRRILAGNFPASPYLQKPWRPDDMPWWRYWR Prediction of potential genes in microbial genomes Time: Thu May 26 13:56:43 2011 Seq name: gi|289656327|gb|ADEA01000040.1| Neisseria sp. oral taxon 014 str. F0314 cont1.40, whole genome shotgun sequence Length of sequence - 6174 bp Number of predicted genes - 7, with homology - 7 Number of transcription units - 3, operones - 2 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 90 - 159 20.1 1 1 Op 1 . - CDS 196 - 618 507 ## COG1734 DnaK suppressor protein - Prom 694 - 753 3.2 2 1 Op 2 . - CDS 791 - 1348 531 ## gi|298370549|ref|ZP_06981864.1| membrane protein 3 1 Op 3 4/1.000 - CDS 1351 - 2148 1131 ## COG0345 Pyrroline-5-carboxylate reductase 4 1 Op 4 . - CDS 2220 - 2915 836 ## COG0325 Predicted enzyme with a TIM-barrel fold - Prom 2982 - 3041 6.5 + Prom 2906 - 2965 7.9 5 2 Op 1 6/1.000 + CDS 3030 - 4076 1679 ## COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT 6 2 Op 2 . + CDS 4112 - 5341 1934 ## COG5008 Tfp pilus assembly protein, ATPase PilU + Term 5371 - 5439 8.5 - Term 5361 - 5424 14.2 7 3 Tu 1 . - CDS 5494 - 5811 264 ## Tmz1t_2017 hypothetical protein - Prom 5931 - 5990 7.9 Predicted protein(s) >gi|289656327|gb|ADEA01000040.1| GENE 1 196 - 618 507 140 aa, chain - ## HITS:1 COG:NMB0056 KEGG:ns NR:ns ## COG: NMB0056 COG1734 # Protein_GI_number: 15675994 # Func_class: T Signal transduction mechanisms # Function: DnaK suppressor protein # Organism: Neisseria meningitidis MC58 # 3 140 1 138 138 230 93.0 6e-61 MIMAKLTEQDILNWNGPEDDYMNSDQLAFFRELLVKMQDELIQNASVTTGHLQEHESAPD PADRATQEEEYALELRTRDRERKLLAKVQATIRSIDEGDYGFCADTGEPIGLKRLLARPT ATLSVEAQERRERMKKQFAD >gi|289656327|gb|ADEA01000040.1| GENE 2 791 - 1348 531 185 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298370549|ref|ZP_06981864.1| ## NR: gi|298370549|ref|ZP_06981864.1| membrane protein [Neisseria sp. oral taxon 014 str. F0314] # 1 185 1 185 185 325 100.0 6e-88 MRGDLLILLSDGIVILCIARCLLQWAGLDTNHPLARFCIQATDWLVKPIRKLVPPQGKWD VACILAGLLFYYAVFILIRLTASSEGFGGRVIAVNFIFAVLALMKAAAYVLFIGLFVRMV LSIKKPYSPVSVSLQRIFESVLRPFVFLRGGRYDFSGSVLALALWFWLGYILPQLFRMLN LWLLQ >gi|289656327|gb|ADEA01000040.1| GENE 3 1351 - 2148 1131 265 aa, chain - ## HITS:1 COG:NMB0055 KEGG:ns NR:ns ## COG: NMB0055 COG0345 # Protein_GI_number: 15675993 # Func_class: E Amino acid transport and metabolism # Function: Pyrroline-5-carboxylate reductase # Organism: Neisseria meningitidis MC58 # 1 263 1 263 263 369 73.0 1e-102 MNIYFLGGGNMAAAIAGGLVRQGGHRVHIANRGKEKRERLAEELGVSVSEKLPELTADDV LVLAVKPQDMQAACQGVQTNGALVLSVAAGLSIATLSRYLGGTRRIVRVMPNTPGKIGLG VSGMFADDSVSDQDKAAADSIMRAVGITVWLDGEERLHDITGISGSGPAYVFYLLDALKQ AARQQGFGEKEAHRLSLATFKGAVALADQTGEDFAVLQQNVTSKGGTTHEAIETFKAGQV AETVVKGVAACVNRSRELAKQFEAV >gi|289656327|gb|ADEA01000040.1| GENE 4 2220 - 2915 836 231 aa, chain - ## HITS:1 COG:NMA0217 KEGG:ns NR:ns ## COG: NMA0217 COG0325 # Protein_GI_number: 15793240 # Func_class: R General function prediction only # Function: Predicted enzyme with a TIM-barrel fold # Organism: Neisseria meningitidis Z2491 # 1 227 1 227 228 337 75.0 8e-93 MSVLQQNYHNVLAQIAGAEASAGRSAGEVRLVAVGKTFPAGDIREVYAAGQRDFGENYIQ EWYEKTEDLADLSDIVWHIIGDVQSNKTKFVAERAHWVHTIGRLKTARRLSAQRPSEMPP LQVCIEVNIAGEAAKHGVAPDEAVALACEVAKLPNLKMRGLMCVAKADAGEAELREAFGR MRALLAELNAAGVAADVLSMGMSGDMKIAVACGATHVRIGSAIFGRRDYSK >gi|289656327|gb|ADEA01000040.1| GENE 5 3030 - 4076 1679 348 aa, chain + ## HITS:1 COG:NMB0052 KEGG:ns NR:ns ## COG: NMB0052 COG2805 # Protein_GI_number: 15675990 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, pilus retraction ATPase PilT # Organism: Neisseria meningitidis MC58 # 1 346 1 346 347 581 89.0 1e-166 MQITDLLAFGVKNKASDLHLSSEMSPMIRVHGDIRRINLPEMTAEEVGNMVTSVMNDHQR KIFQQDLEVDFSFELPNVARFRVNAFTSNRGPAAVFRTIPSTVLTLEDLRAPRIFQKIAD NPRGLVLVTGPTGSGKSTTLAAMINYINETQPAHILTIEDPIEFVHPSKKALINQRELHQ HTHSFANALRSALREDPDVILVGEMRDPETIGLALTAAETGHLVFGTLHTTGAAKTVDRI VDVFPAGEKEMVRSMLSESLRAVISQTLLKTRDGNGRVAAHEILISTPAVRNLIRENKIA QINSTLQTGQAHGMQTLDQALQALVRQGTISPEVARSKAQNSESLSIA >gi|289656327|gb|ADEA01000040.1| GENE 6 4112 - 5341 1934 409 aa, chain + ## HITS:1 COG:NMB0051 KEGG:ns NR:ns ## COG: NMB0051 COG5008 # Protein_GI_number: 15675989 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, ATPase PilU # Organism: Neisseria meningitidis MC58 # 7 409 6 407 408 556 66.0 1e-158 MSDSTPLHDLLTEMVQAYSQKNQPPHIPTPAEIGTHLHPLLDRMCAEAESRNASDIFISA GFPPAMKVSGVLSPVPHKALTGEETAAIVESTMNPEQLEAFNQNWEINYSVQSRSNTRYR VNAYHEQGRVGMVLRRINQKIPEIDELGLPPKLKDLALTPRGMLILAGPTGSGKSTTMAS MLDYRNNKVPGHIVTIEDPIEYIYKPRRCIFTQREVGIDTPDWKIAVQSAMRQAPDVVCI GEVRSESSMEYAMQLAQTGHLCVFTIHANNAAQAIERITNFYSEDRRPQVLMDLALNLTG IIGQRLVIRKNRTLRTAVIDLLLNTPAMQDLIFKGDLMDVHGLMQRSSTEGMQTFDQHLF NLYIKDQIEYDEALRQADSVNDLRLRIQMHEEGNDPARLYDRISDLNLM >gi|289656327|gb|ADEA01000040.1| GENE 7 5494 - 5811 264 105 aa, chain - ## HITS:1 COG:no KEGG:Tmz1t_2017 NR:ns ## KEGG: Tmz1t_2017 # Name: not_defined # Def: hypothetical protein # Organism: Thauera # Pathway: not_defined # 8 61 1 54 70 89 74.0 5e-17 MKESEIVMAKKFPIFPKNPERICWGCDKYCRADDLQCGNGCERIQHPIEVDGQDWYKKGD WSNLLSDQQQIELGLKEAPPAEAVVKIEPKIAKPHIKLPLKNKAV Prediction of potential genes in microbial genomes Time: Thu May 26 14:00:43 2011 Seq name: gi|289656326|gb|ADEA01000041.1| Neisseria sp. oral taxon 014 str. F0314 cont1.41, whole genome shotgun sequence Length of sequence - 76478 bp Number of predicted genes - 81, with homology - 80 Number of transcription units - 33, operones - 16 average op.length - 4.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 38 - 1957 2841 ## COG1154 Deoxyxylulose-5-phosphate synthase - Prom 2041 - 2100 5.6 + Prom 2118 - 2177 3.0 2 2 Tu 1 . + CDS 2202 - 2723 625 ## gi|298370556|ref|ZP_06981871.1| serine/arginine repetitive matrix protein 1 + Term 2741 - 2779 10.2 - Term 2724 - 2772 16.7 3 3 Op 1 . - CDS 2788 - 3579 970 ## NMO_1315 putative fimbrial assembly protein - Prom 3613 - 3672 1.8 4 3 Op 2 . - CDS 3731 - 5074 2484 ## COG0137 Argininosuccinate synthase - Prom 5104 - 5163 4.9 5 4 Tu 1 . + CDS 5388 - 6188 1021 ## COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA + Term 6197 - 6238 11.3 - Term 6179 - 6231 14.1 6 5 Tu 1 . - CDS 6258 - 7262 1525 ## COG3178 Predicted phosphotransferase related to Ser/Thr protein kinases - Prom 7292 - 7351 6.5 + Prom 7236 - 7295 5.3 7 6 Op 1 16/0.000 + CDS 7504 - 9747 3103 ## COG1452 Organic solvent tolerance protein OstA 8 6 Op 2 . + CDS 9744 - 10658 1099 ## COG0760 Parvulin-like peptidyl-prolyl isomerase + Term 10679 - 10725 16.8 - Term 10667 - 10713 16.8 9 7 Op 1 . - CDS 10786 - 11319 1 ## NGK_2244 hypothetical protein 10 7 Op 2 . - CDS 11390 - 11758 95 ## COG1576 Uncharacterized conserved protein - Prom 11819 - 11878 4.2 - Term 11887 - 11941 7.9 11 8 Op 1 50/0.000 - CDS 11952 - 12329 589 ## PROTEIN SUPPORTED gi|241759652|ref|ZP_04757753.1| ribosomal protein L17 12 8 Op 2 26/0.000 - CDS 12354 - 13340 583 ## COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit 13 8 Op 3 36/0.000 - CDS 13366 - 13986 990 ## PROTEIN SUPPORTED gi|241759655|ref|ZP_04757756.1| ribosomal protein S4 14 8 Op 4 48/0.000 - CDS 14007 - 14402 666 ## PROTEIN SUPPORTED gi|15676093|ref|NP_273224.1| 30S ribosomal protein S11 15 8 Op 5 2/0.455 - CDS 14422 - 14784 579 ## PROTEIN SUPPORTED gi|241759635|ref|ZP_04757736.1| 30S ribosomal protein S13 16 8 Op 6 . - CDS 14847 - 14960 195 ## PROTEIN SUPPORTED gi|34499619|ref|NP_903834.1| 50S ribosomal protein L36 17 8 Op 7 3/0.273 - CDS 14985 - 15203 237 ## PROTEIN SUPPORTED gi|15610598|ref|NP_217979.1| translation initiation factor IF-1 18 8 Op 8 53/0.000 - CDS 15210 - 16526 1089 ## PROTEIN SUPPORTED gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 19 8 Op 9 48/0.000 - CDS 16540 - 16974 667 ## PROTEIN SUPPORTED gi|241759618|ref|ZP_04757719.1| ribosomal protein L15 20 8 Op 10 50/0.000 - CDS 16976 - 17161 298 ## PROTEIN SUPPORTED gi|225076413|ref|ZP_03719612.1| hypothetical protein NEIFLAOT_01458 21 8 Op 11 56/0.000 - CDS 17154 - 17672 869 ## PROTEIN SUPPORTED gi|225076412|ref|ZP_03719611.1| hypothetical protein NEIFLAOT_01457 22 8 Op 12 46/0.000 - CDS 17690 - 18043 566 ## PROTEIN SUPPORTED gi|15676085|ref|NP_273216.1| 50S ribosomal protein L18 23 8 Op 13 55/0.000 - CDS 18057 - 18590 873 ## PROTEIN SUPPORTED gi|241759663|ref|ZP_04757764.1| ribosomal protein L6 24 8 Op 14 50/0.000 - CDS 18604 - 18996 625 ## PROTEIN SUPPORTED gi|225076409|ref|ZP_03719608.1| hypothetical protein NEIFLAOT_01454 25 8 Op 15 50/0.000 - CDS 19011 - 19316 504 ## PROTEIN SUPPORTED gi|225076408|ref|ZP_03719607.1| hypothetical protein NEIFLAOT_01453 26 8 Op 16 48/0.000 - CDS 19319 - 19858 904 ## PROTEIN SUPPORTED gi|225076407|ref|ZP_03719606.1| hypothetical protein NEIFLAOT_01452 27 8 Op 17 57/0.000 - CDS 19868 - 20191 522 ## PROTEIN SUPPORTED gi|225076406|ref|ZP_03719605.1| hypothetical protein NEIFLAOT_01451 28 8 Op 18 50/0.000 - CDS 20203 - 20571 604 ## PROTEIN SUPPORTED gi|15676079|ref|NP_273210.1| 50S ribosomal protein L14 - Prom 20599 - 20658 7.3 - Term 20712 - 20776 5.4 29 9 Op 1 50/0.000 - CDS 20799 - 21062 422 ## PROTEIN SUPPORTED gi|225076404|ref|ZP_03719603.1| hypothetical protein NEIFLAOT_01449 30 9 Op 2 50/0.000 - CDS 21062 - 21253 300 ## PROTEIN SUPPORTED gi|225076403|ref|ZP_03719602.1| hypothetical protein NEIFLAOT_01448 31 9 Op 3 50/0.000 - CDS 21253 - 21669 704 ## PROTEIN SUPPORTED gi|225076402|ref|ZP_03719601.1| hypothetical protein NEIFLAOT_01447 32 9 Op 4 61/0.000 - CDS 21653 - 22348 1145 ## PROTEIN SUPPORTED gi|225076401|ref|ZP_03719600.1| hypothetical protein NEIFLAOT_01446 33 9 Op 5 59/0.000 - CDS 22358 - 22687 537 ## PROTEIN SUPPORTED gi|15676074|ref|NP_273205.1| 50S ribosomal protein L22 34 9 Op 6 60/0.000 - CDS 22696 - 22974 477 ## PROTEIN SUPPORTED gi|15676073|ref|NP_273204.1| 30S ribosomal protein S19 35 9 Op 7 61/0.000 - CDS 22980 - 23813 1448 ## PROTEIN SUPPORTED gi|121634019|ref|YP_974264.1| 50S ribosomal protein L2 36 9 Op 8 61/0.000 - CDS 23819 - 24139 507 ## PROTEIN SUPPORTED gi|218767166|ref|YP_002341678.1| 50S ribosomal protein L23 37 9 Op 9 58/0.000 - CDS 24130 - 24750 1023 ## PROTEIN SUPPORTED gi|15676070|ref|NP_273201.1| 50S ribosomal protein L4 38 9 Op 10 40/0.000 - CDS 24750 - 25394 1066 ## PROTEIN SUPPORTED gi|15676069|ref|NP_273200.1| 50S ribosomal protein L3 - Prom 25478 - 25537 7.1 - Term 25597 - 25648 3.7 39 10 Op 1 16/0.000 - CDS 25656 - 25967 517 ## PROTEIN SUPPORTED gi|225024696|ref|ZP_03713888.1| hypothetical protein EIKCOROL_01578 40 10 Op 2 30/0.000 - CDS 25985 - 27169 1584 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 - Prom 27190 - 27249 4.0 - Term 27198 - 27246 4.4 41 10 Op 3 51/0.000 - CDS 27258 - 29363 2054 ## COG0480 Translation elongation factors (GTPases) 42 10 Op 4 56/0.000 - CDS 29382 - 29852 778 ## PROTEIN SUPPORTED gi|59802165|ref|YP_208877.1| 30S ribosomal protein S7 43 10 Op 5 5/0.091 - CDS 29970 - 30341 645 ## PROTEIN SUPPORTED gi|15676064|ref|NP_273194.1| 30S ribosomal protein S12 - Prom 30390 - 30449 5.8 - Term 30472 - 30519 13.6 44 11 Op 1 58/0.000 - CDS 30538 - 34725 4840 ## COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit 45 11 Op 2 28/0.000 - CDS 34891 - 39069 4016 ## PROTEIN SUPPORTED gi|163796927|ref|ZP_02190884.1| 30S ribosomal protein S12 - Prom 39141 - 39200 6.2 - Term 39206 - 39239 6.1 46 12 Op 1 47/0.000 - CDS 39258 - 39629 584 ## PROTEIN SUPPORTED gi|225076432|ref|ZP_03719631.1| hypothetical protein NEIFLAOT_01478 47 12 Op 2 43/0.000 - CDS 39688 - 40188 774 ## PROTEIN SUPPORTED gi|15676058|ref|NP_273188.1| 50S ribosomal protein L10 - Prom 40252 - 40311 4.8 - Term 40363 - 40403 6.7 48 13 Op 1 55/0.000 - CDS 40416 - 41111 1121 ## PROTEIN SUPPORTED gi|15676056|ref|NP_273186.1| 50S ribosomal protein L1 49 13 Op 2 45/0.000 - CDS 41111 - 41545 715 ## PROTEIN SUPPORTED gi|121634005|ref|YP_974250.1| 50S ribosomal protein L11 50 13 Op 3 . - CDS 41652 - 42185 509 ## COG0250 Transcription antiterminator - Prom 42219 - 42278 2.9 - TRNA 42580 - 42655 79.2 # Trp CCA 0 0 - Term 42527 - 42577 10.1 51 14 Tu 1 . - CDS 42662 - 43846 1584 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 - Prom 43868 - 43927 2.5 - TRNA 43913 - 43987 89.4 # Thr GGT 0 0 - TRNA 43998 - 44071 83.4 # Gly TCC 0 0 - TRNA 44100 - 44183 67.7 # Tyr GTA 0 0 52 15 Tu 1 . - CDS 44286 - 44537 240 ## COG1145 Ferredoxin - Prom 44573 - 44632 5.7 53 16 Tu 1 . - CDS 44656 - 45225 373 ## COG0742 N6-adenine-specific methylase - Prom 45307 - 45366 4.4 - Term 45333 - 45382 13.8 54 17 Op 1 2/0.455 - CDS 45408 - 47714 3165 ## COG0550 Topoisomerase IA 55 17 Op 2 8/0.000 - CDS 47790 - 48245 738 ## COG2922 Uncharacterized protein conserved in bacteria 56 17 Op 3 . - CDS 48261 - 49442 1034 ## COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake - Prom 49515 - 49574 6.0 + Prom 49864 - 49923 8.2 57 18 Tu 1 . + CDS 50055 - 51533 1509 ## COG0477 Permeases of the major facilitator superfamily - Term 51542 - 51591 19.0 58 19 Op 1 8/0.000 - CDS 51625 - 52899 1525 ## COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 59 19 Op 2 . - CDS 52886 - 55018 2389 ## COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation 60 19 Op 3 . - CDS 55022 - 55615 668 ## NMO_1924 hypothetical protein 61 19 Op 4 20/0.000 - CDS 55581 - 56864 1101 ## COG0144 tRNA and rRNA cytosine-C5-methylases 62 19 Op 5 . - CDS 56975 - 57901 1221 ## COG0223 Methionyl-tRNA formyltransferase - Prom 57973 - 58032 3.7 63 20 Tu 1 . - CDS 58061 - 58606 320 ## MCP_1401 hypothetical protein - Prom 58792 - 58851 6.2 - Term 58904 - 58942 -0.4 64 21 Tu 1 . - CDS 59041 - 59544 878 ## COG0242 N-formylmethionyl-tRNA deformylase - Prom 59791 - 59850 5.8 + Prom 59736 - 59795 5.6 65 22 Tu 1 . + CDS 59838 - 61118 1794 ## COG1652 Uncharacterized protein containing LysM domain + Term 61156 - 61203 15.3 - Term 61395 - 61434 4.8 66 23 Tu 1 . - CDS 61481 - 62095 635 ## NMO_1929 hypothetical protein - Prom 62219 - 62278 2.4 - Term 62301 - 62366 12.3 67 24 Op 1 19/0.000 - CDS 62403 - 62861 793 ## COG1781 Aspartate carbamoyltransferase, regulatory subunit 68 24 Op 2 . - CDS 62871 - 63791 1430 ## COG0540 Aspartate carbamoyltransferase, catalytic chain - Prom 63938 - 63997 2.0 + Prom 63998 - 64057 4.3 69 25 Op 1 . + CDS 64087 - 64944 1211 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 70 25 Op 2 . + CDS 64976 - 65110 194 ## + Term 65177 - 65219 10.7 - Term 65163 - 65207 11.1 71 26 Tu 1 . - CDS 65227 - 66657 1954 ## COG2067 Long-chain fatty acid transport protein - Prom 66738 - 66797 2.4 + Prom 66773 - 66832 3.9 72 27 Tu 1 . + CDS 66884 - 67639 926 ## COG0500 SAM-dependent methyltransferases + Term 67662 - 67697 7.4 - Term 67627 - 67685 13.0 73 28 Tu 1 . - CDS 67703 - 69034 1548 ## COG0477 Permeases of the major facilitator superfamily - Prom 69199 - 69258 4.0 - Term 69064 - 69102 -1.0 74 29 Op 1 . - CDS 69298 - 70335 1068 ## COG1609 Transcriptional regulators 75 29 Op 2 . - CDS 70345 - 70497 118 ## gi|298370628|ref|ZP_06981943.1| hypothetical protein HMPREF9016_02306 - Prom 70601 - 70660 5.0 + Prom 70698 - 70757 5.7 76 30 Tu 1 . + CDS 70877 - 72517 2158 ## COG0166 Glucose-6-phosphate isomerase + Term 72555 - 72601 14.2 - Term 72541 - 72588 14.4 77 31 Op 1 . - CDS 72610 - 73431 1222 ## COG2171 Tetrahydrodipicolinate N-succinyltransferase - Prom 73556 - 73615 3.0 - Term 73611 - 73640 1.2 78 31 Op 2 . - CDS 73657 - 75150 1407 ## COG0469 Pyruvate kinase - Prom 75231 - 75290 4.5 + Prom 75148 - 75207 6.0 79 32 Op 1 . + CDS 75441 - 75965 180 ## NGK_2387 membrane protein 80 32 Op 2 . + CDS 76057 - 76200 60 ## COG4105 DNA uptake lipoprotein + Term 76235 - 76266 4.1 - Term 76223 - 76254 4.1 81 33 Tu 1 . - CDS 76306 - 76476 166 ## COG1555 DNA uptake protein and related DNA-binding proteins Predicted protein(s) >gi|289656326|gb|ADEA01000041.1| GENE 1 38 - 1957 2841 639 aa, chain - ## HITS:1 COG:NMB1867 KEGG:ns NR:ns ## COG: NMB1867 COG1154 # Protein_GI_number: 15677702 # Func_class: H Coenzyme transport and metabolism; I Lipid transport and metabolism # Function: Deoxyxylulose-5-phosphate synthase # Organism: Neisseria meningitidis MC58 # 1 637 1 633 637 1157 90.0 0 MSQTPLLDTINLPQDLRRLDKKQLPQIAAELRAFLLDSIGKTGGHFASNLGAVELTIALH YVYDTPEDKLVWDVGHQSYPHKILTGRKDQMHTMRRYGGLAGFPKRSESEYDAFGVGHSS TSIGAALGMAAADKLLGSDRRSVAIIGDGAMTAGQAFEALNCAGDMDVNLLVILNDNEMS ISPNVGALPKYLASNVVRDMRGVLSTIKAQSSKVLDKLPGAMELAQKVEHKIKTLAGEAE HAKQSLSLFENFGFRYTGPVDGHNVEHLVDVLKDLHGRKGPQLLHVITKKGNGYKLAEND PVKYHAVANLPKDVSDDLKTATSSEKENKPAAKPTYTQVFGKWLCDQAAADSRLAAITPA MREGSGLVEFEQQFPDRYFDVGIAEQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVH DIALQNLPVLFAVDRAGIVGADGPTHAGLYDLSFLRCVPNMIVAAPSDENECRLLLSTCY QADAPAAVRYPRGTGTGAPVSDDLETVAIGKGIIRRQGEKTAFIAFGSMVAPALAVAEKL NATVADMRFVKPIDEELIVRLAQSHDYIVTAEENAEQGGAGSAVLEVLAKHGICKPVLLL GVADTVTEHGDPKKLLDDLGLSAERIEQRIQQWIAAKAV >gi|289656326|gb|ADEA01000041.1| GENE 2 2202 - 2723 625 173 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298370556|ref|ZP_06981871.1| ## NR: gi|298370556|ref|ZP_06981871.1| serine/arginine repetitive matrix protein 1 [Neisseria sp. oral taxon 014 str. F0314] # 1 173 1 173 173 289 100.0 4e-77 MSVNKTVLFLSCCLLAACGQKESASPSQASAPDSPQTVSAPAPAAVSQPAPAAASAPAAL GGELQTADRAAWQKYRCAEGSVEARYYKGSAGPEAQIRYKGGILTAAYSAAGSDEDLTAF SDGTQTWTIGNEFGNDFYKEGNGFLVHHEQAEGIDGTEATVDNLLLHECTPVS >gi|289656326|gb|ADEA01000041.1| GENE 3 2788 - 3579 970 263 aa, chain - ## HITS:1 COG:no KEGG:NMO_1315 NR:ns ## KEGG: NMO_1315 # Name: not_defined # Def: putative fimbrial assembly protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 1 258 2 258 262 322 63.0 6e-87 METVKTPSRWRFALKMAGCHLLVSLFLAGMAALLVFKVWYPYPYAELTGGLQLYKLVVAV DVVCGPLLTLVLASPKKSVRERVVDFSLVGVIQLAALLYGLYSVSLARPVAVAFEVDRFS VVTAAEVDDTLLADAPEGLRRLPWFGVNRVGIREPLNAEEYNQDLMLSLKGIEPSMRPNR WAADDAREREKIRRGMKPLSALAAMRNMTEADILREADVKDTGEKRYYLPFTGSKEKGWI AVLDDHADFLGFAKIDGFAKAAK >gi|289656326|gb|ADEA01000041.1| GENE 4 3731 - 5074 2484 447 aa, chain - ## HITS:1 COG:NMA0303 KEGG:ns NR:ns ## COG: NMA0303 COG0137 # Protein_GI_number: 15793316 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate synthase # Organism: Neisseria meningitidis Z2491 # 1 447 1 447 447 903 98.0 0 MSQNNTILQHLPIGQKVGIAFSGGLDTSAALLWMKLKGALPYAYTANLGQPDEDDYNAIP KKAMEYGAENARLIDCRAQLAHEGIAAIQCGAFHVSTGGIAYFNTTPLGRAVTGTMLVSA MKEDDVNIWGDGSTYKGNDIERFYRYGLLTNPALKIYKPWLDQQFIDELGGRHEMSEFLI ANGFNYKMSVEKAYSTDSNMLGATHEAKDLEFLNSGIKIVKPIMGVAFWDENVEVKPEEV SVRFEEGVPVALNGKEYADPVELFLEANRIGGRHGLGMSDQIENRIIEAKSRGIYEAPGM ALFHIAYERLVTGIHNEDTIEQYRINGLRLGRLLYQGRWFDSQALMLRETAQRWVAKAIT GEVTLELRRGNDYSILNTESPNLTYQPERLSMEKVEDAAFTPLDRIGQLTMRNLDITDTR AKLGIYSQSGLLSLGEGSVLPQLGNKK >gi|289656326|gb|ADEA01000041.1| GENE 5 5388 - 6188 1021 266 aa, chain + ## HITS:1 COG:NMB2128 KEGG:ns NR:ns ## COG: NMB2128 COG1058 # Protein_GI_number: 15677941 # Func_class: R General function prediction only # Function: Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA # Organism: Neisseria meningitidis MC58 # 1 264 1 264 266 468 85.0 1e-132 MNAFNLIIIGDEILHGSRQDKHFAFFKSLLESSGLKLNQVQYLPDEPDLLVKQLRRSFSD GLPTFVTGGIGSTPDDHTRQAAAAALDLPVVRHPEAAKFIEDVTLKRGEPLNAPEHAQRL KMADFPAGAELVPNPFNNIAGFSIREHYFFPGFPVMAHPMAEWVLDTYYADRFNQTERGS RSVYVFGQPESRVAPIMEYVERTYPGVRSYSLPSVGWQNADGTAVKPHIEFGIKAESAAC RDLDKAWDEVLRRLRDVGAELKDKAE >gi|289656326|gb|ADEA01000041.1| GENE 6 6258 - 7262 1525 334 aa, chain - ## HITS:1 COG:NMA2208 KEGG:ns NR:ns ## COG: NMA2208 COG3178 # Protein_GI_number: 15795077 # Func_class: R General function prediction only # Function: Predicted phosphotransferase related to Ser/Thr protein kinases # Organism: Neisseria meningitidis Z2491 # 1 334 1 334 334 586 87.0 1e-167 MQRQTELKKWLETVYPDQPFELSFAAADADFRRYFRATFSDGHTVVCMDAPPDKMSVAPY LKVQKLFHMVNVPQVLHVDETQGFMVLNDLGSTTFLTAMTQEKNEAAHKALLLEAVGELI ELQLASRSGVLPEYDREVMLREINLFPEWFVAKELGRELNFKQRRLWQQTVDTLLPPLLA QPKVYVHRDYIVRNLMLQEGRPGVLDFQDALYGPISYDLVSLLRDAFIGWDEEFVLDLVI RYWEQARAAGLPVPPEFDEFYRWFEWMGVQRHLKVAGIFARLYHRDGKDKYRPEIPRFLN YLRRVSRRYQDLAPLYALLVDLVGDEELETGYTF >gi|289656326|gb|ADEA01000041.1| GENE 7 7504 - 9747 3103 747 aa, chain + ## HITS:1 COG:NMA2207 KEGG:ns NR:ns ## COG: NMA2207 COG1452 # Protein_GI_number: 15795076 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Organic solvent tolerance protein OstA # Organism: Neisseria meningitidis Z2491 # 1 738 56 788 802 976 62.0 0 MGTTCLFCSHETVQAEARALGLTGNPVRRSGEDPLPADYTRVTADQIQGKTKVAVRAEGD VIIERNDEILNAQWADYDQAANTVTAGNKFKLAQNGSTVSGNKITYNLTDSTGTSDYVRV DAEQEGRRLQSVSRQAEMKGKGLYKLIETKFNTCSPGDASWYIKAKSIEADQNSGIGVAK GASLVFGGVPVLYTPWADFPINGSRKSGLLVPNISTGSDGLELALPYYLNLAPNYDATVT PGIISSRGVHLGGQFRYLQPKYSGQLDGDWMPHDKKRDRNNRYQFKWNHNQQITRHLNGG IDFNQVSDNDYYRDFYGRNDIAGNVNLNRQAWLNYDDSLWGGNFNGSITAQKYQTLANES GYKDKPYAYMPKLTGNWQRNIGNAEINVYGQFTRFDHDEKQSGSRALLYPSIKWDFHNQW GYVRPKIGVHSTYYALDKFNSTPSRHASRTLPIFNVDSGMTFERKAKLFGSNYIQTLEPR LFYNYIPTKSQNDLPNFDSSENSFSYAQLFRENLYSGSDRINAANSLSTAVQTRILDPNN GTERFRAGIGQKFYIKTDTVLLDGSVSQYERNRSDWVAFAHGNVSNSVRLDADVHYNQNL GRAESYSAGVRYNPEPGKILSARYKYGRNEKIYLQSDGSYYYDRLSQIDLAAQWPIKKNL YAIARYNYEIEAKKPLEILAGVEYKSNCGCWSASIVGQHYVTGLNSSKNAVFFNLQLKDL SNIGNNPFEQLRLAIPGYSKTNEVVTK >gi|289656326|gb|ADEA01000041.1| GENE 8 9744 - 10658 1099 304 aa, chain + ## HITS:1 COG:NMB0281 KEGG:ns NR:ns ## COG: NMB0281 COG0760 # Protein_GI_number: 15676205 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Neisseria meningitidis MC58 # 23 303 68 347 348 355 72.0 4e-98 MNFKPLILAAALGLTLNVHAADVKFSDGIAAVVDNDVITQREVAQAVAAARSRLPKGSQI SNDELRQQVLSQLVNQSLIIQAGKRKKIQASEAEIDAVLAQNPTQAKKANKAVRRQIADS IVVEKVRQQAIMQNSRVSDAEVDRFLAQAQRQGITLPAGEPLRQYKAQHILLKADSDNAV SAAESSIRKIYAQARSGTDFSALARQYSQDTSAGNGGDLGWFSDGQMVAPFEDAVHKLKP GQVSPPVRTQFGWHIIKLNEVRDAGTPEERQRNAVRQYISNQKAQQATTNLLQELHSSSY VNVH >gi|289656326|gb|ADEA01000041.1| GENE 9 10786 - 11319 1 177 aa, chain - ## HITS:1 COG:no KEGG:NGK_2244 NR:ns ## KEGG: NGK_2244 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 1 175 1 174 176 184 60.0 2e-45 MHSRDLEDLTLLLVRDEEEPAMWLDRWLLSYPVAHMAKVSRHQRITDWQSILQTAFNAIC SKNTAVVAHGAGVSGFLAWLYLADMNTQRKVRNIILVSPLQDAFPDDAEHSLQRVRCHCP AALVIGRQDLACPEDWAKRQARLWNVRLLIAPEEGRLNGNLQGWQWGMKLMQEMLRS >gi|289656326|gb|ADEA01000041.1| GENE 10 11390 - 11758 95 122 aa, chain - ## HITS:1 COG:NMA0418 KEGG:ns NR:ns ## COG: NMA0418 COG1576 # Protein_GI_number: 15793423 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 1 122 35 156 156 206 81.0 6e-54 MKEIKPEKRGSGVSAEQGMAAEEKRILEAIPQGAYLVVLDERGKAPTSLELAGYLKVWMQ NGDHVCFIIGGTDGMTEELKQQAKLILRLSSLTLPHGMVRVLLTEQLYRAASILNNHPYH RE >gi|289656326|gb|ADEA01000041.1| GENE 11 11952 - 12329 589 125 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|241759652|ref|ZP_04757753.1| ribosomal protein L17 [Neisseria flavescens SK114] # 1 122 1 122 124 231 94 9e-60 MRHRNGNRKLNRTSSHRTAMLRNMANSLLTHETIVTTLPKAKELRRVAEPLITLGKKPSL ANRRLAFNRTRDRDVVVKLFDELGPRFAARNGGYVRILKYGFRKGDNAPLALVELVDRAT ESVNS >gi|289656326|gb|ADEA01000041.1| GENE 12 12354 - 13340 583 328 aa, chain - ## HITS:1 COG:NMA0103 KEGG:ns NR:ns ## COG: NMA0103 COG0202 # Protein_GI_number: 15793131 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, alpha subunit/40 kD subunit # Organism: Neisseria meningitidis Z2491 # 1 328 1 328 328 602 94.0 1e-172 MQNSTTEFLKPRQIDVDTLSTTRAKVSMQPFERGFGHTLGNALRRILLSSMNGFAPTEVA IAGVLHEYSTVDGVQEDVVDILLNIKGIVFKLYGRSQVQLTLKKSGTGTVVAGDIELPHD VEIINPEHVICHLSDNGQIEMEIKVEQGRGYQSVSGRRVFRDENKQIGAIQLDASFSPIS RVSFEVEPARVEQRTDLDKLVLDIETDGSLDPEEAVRSAARILIDQMSIFADLQGTPVEE IEEKAPPIDPILLRPVDDLELTVRSANCLKAEDIYYIGDLIQRTETELLKTPNLGRKSLN EIKEVLASKGLTLGSKLEAWPPVGLEKP >gi|289656326|gb|ADEA01000041.1| GENE 13 13366 - 13986 990 206 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|241759655|ref|ZP_04757756.1| ribosomal protein S4 [Neisseria flavescens SK114] # 1 206 1 206 206 385 94 1e-106 MARYIGPKCKLARREGTDLFLKSARRSLDSKCKIDSAPGQHGAKKPRLSDYGLQLREKQK IRRIYGVLERQFRRYFAEAARRKGSTGELLLQLLESRLDNVVYRLGFGSTRAEARQLVSH KAITVNGQVVNIPSYQVKAGDIIAVREKAKKQVRIQEALNLATQIGLPSWVSVDTNKLEG VFKNMPDRSELSSDINEQLVVEFYSK >gi|289656326|gb|ADEA01000041.1| GENE 14 14007 - 14402 666 131 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15676093|ref|NP_273224.1| 30S ribosomal protein S11 [Neisseria meningitidis MC58] # 1 131 1 131 131 261 100 1e-68 MAKANTASRVRKKVRKTVSEGIVHVHASFNNTIITITDRQGNALSWATSGGAGFKGSRKS TPFAAQVAAEAAGKVAQEYGVKNLEVRIKGPGPGRESSVRALNALGFKITSITDVTPLPH NGCRPPKKRRI >gi|289656326|gb|ADEA01000041.1| GENE 15 14422 - 14784 579 120 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|241759635|ref|ZP_04757736.1| 30S ribosomal protein S13 [Neisseria flavescens SK114] # 1 120 1 120 120 227 93 1e-58 MARISGVNIPNNAHVVIGLQAIYGIGTTRAKLICEAAKIAPSIKVKDLDENQLEALREQV AKYEVEGDLRREVTMSIKRLMDMGCYRGFRHRRGLPCRGQRTRTNARTRKGPRKAIAGKK >gi|289656326|gb|ADEA01000041.1| GENE 16 14847 - 14960 195 37 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|34499619|ref|NP_903834.1| 50S ribosomal protein L36 [Chromobacterium violaceum ATCC 12472] # 1 37 1 37 37 79 97 4e-14 MRVQPSVKKICRNCKIIRRNRVVRVICTDPRHKQRQG >gi|289656326|gb|ADEA01000041.1| GENE 17 14985 - 15203 237 72 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15610598|ref|NP_217979.1| translation initiation factor IF-1 [Mycobacterium tuberculosis H37Rv] # 1 70 1 71 73 95 63 6e-19 MAKEDTIQMQGEILETLPNATFKVKLENDHVVLGHISGKMRMHYIRISPGDKVTVELTPY DLTRARIVFRAR >gi|289656326|gb|ADEA01000041.1| GENE 18 15210 - 16526 1089 438 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 [alpha proteobacterium BAL199] # 13 433 19 443 447 424 49 1e-118 MANQQSSSSGLFKSIDLKKRLLFLLGALIVFRIGAHIPVPGVDAVALAKLYESAGSGILG MLNMFSGGSLERFSIFAIGIMPYISASIIVQLASEILPSLKSLKKEGEAGRKVITKYTRY GTVLLAILQSLGVATFVFQQGVVVAASLEFHISTVVCLVTGTMFLMWLGEQITERGIGNG ISLIITAGIAAGIPAAIVQLVTLTNQGSMSIFTAISIIFGALLLIYIVVYFESAQRKIPI HYAKRQFGNNVIQGQNTHMPFKLNMAGVIPPIFASSIILFPSTLLSWFGSNNTDNLLHRI AGLLQHGQPLYICLFAATIIFFCYFYTALVFSPKEMAENLKKSGAFVPGIRPGGHTSRYL EGVVLRLTLFGALYITVICLIPEFLTTTFNIPFYLGGTSLLILVVVTMDFNTQINSYRMS QQYESLMKRTDMKSLSRK >gi|289656326|gb|ADEA01000041.1| GENE 19 16540 - 16974 667 144 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|241759618|ref|ZP_04757719.1| ribosomal protein L15 [Neisseria flavescens SK114] # 1 144 1 144 144 261 90 8e-69 MFLNSIQPAEGATHARRRVGRGIGSGLGKTGGRGHKGQKSRSGGFHKVGFEGGQMPLQRR LPKRGFKSLTAAANAEIRLSELNLLAVNEIDVLVLKQAGLVPATVSSVKVIASGELSKAI VLKGIKATKGAKVAIETAGGKVEE >gi|289656326|gb|ADEA01000041.1| GENE 20 16976 - 17161 298 61 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225076413|ref|ZP_03719612.1| hypothetical protein NEIFLAOT_01458 [Neisseria flavescens NRL30031/H210] # 1 61 1 61 61 119 98 5e-26 MTEQKKIKVTLVKSLIGTIESHRACARGLGLRHREHTVEVLDTPENRGMINKISYLLKVE S >gi|289656326|gb|ADEA01000041.1| GENE 21 17154 - 17672 869 172 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225076412|ref|ZP_03719611.1| hypothetical protein NEIFLAOT_01457 [Neisseria flavescens NRL30031/H210] # 1 172 1 172 172 339 99 3e-92 MAKHEIEERGDGLIEKMVAVNRVTKVVKGGRIMAFSALTVVGDGDGRIGMGKGKSKEVPV AVQKAMDQARRSMIKVPLKNGTIHHEVIGRHGATKVFMQPAKEGSGVKAGGPMRLVFDAM GIHNISAKVHGSTNPYNIVRATLDGLSKLYTPADIAAKRGLTVEDILGASHD >gi|289656326|gb|ADEA01000041.1| GENE 22 17690 - 18043 566 117 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15676085|ref|NP_273216.1| 50S ribosomal protein L18 [Neisseria meningitidis MC58] # 1 117 1 117 117 222 98 4e-57 MDKHTTRLRRARKTRARIADLKMVRLCVFRSNNHIYAQVISAEGDKVLAQASTLEAEVRG SLKSGSNVEAAAVVGKRIAEKAKAVGVEKVAFDRSGFQYHGRVKALAEAARENGLSF >gi|289656326|gb|ADEA01000041.1| GENE 23 18057 - 18590 873 177 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|241759663|ref|ZP_04757764.1| ribosomal protein L6 [Neisseria flavescens SK114] # 1 177 1 177 177 340 98 1e-92 MSRVAKNPVTVPAGVEVKFGTEALVIKGKNGELSFPLHSDVAIELNDGKLTFAAKNDSKQ ANAMSGTARALVNNMVKGVSEGFEKKLQLIGVGYRAQAQGKILNLSLGFSHPIVYEMPEG VSVQTPSQTEIVLTGADKQVVGQVAAEIRAFRSPEPYKGKGVRYVGEVVVMKEAKKK >gi|289656326|gb|ADEA01000041.1| GENE 24 18604 - 18996 625 130 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225076409|ref|ZP_03719608.1| hypothetical protein NEIFLAOT_01454 [Neisseria flavescens NRL30031/H210] # 1 130 1 130 130 245 96 6e-64 MSMHDPISDMLTRIRNAQRANKVVVAMPSSKLKCAIAKVLKEEGYIEDFSVSADAKPVLE IQLKYYAGRPVIEQIKRVSRPGLRIYKASSEIPNVMNGLGIAIVSTSKGVMTDRKARSEG VGGELLCIVA >gi|289656326|gb|ADEA01000041.1| GENE 25 19011 - 19316 504 101 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225076408|ref|ZP_03719607.1| hypothetical protein NEIFLAOT_01453 [Neisseria flavescens NRL30031/H210] # 1 101 1 101 101 198 100 6e-50 MAKKALINRELKRQALAKKFAAKREAIFAVINDANATEEERFEARLKFQSIPRNAAPVRQ RRRCALTGRPRGTFRKFGLGRIKIREIAMRGEIPGVVKASW >gi|289656326|gb|ADEA01000041.1| GENE 26 19319 - 19858 904 179 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225076407|ref|ZP_03719606.1| hypothetical protein NEIFLAOT_01452 [Neisseria flavescens NRL30031/H210] # 1 179 1 179 179 352 99 3e-96 MARLREFYKDTVVPELIKQFGYKSVMEVPRIEKITLNMGVGEAVADKKVMEHAVSDLEKI AGQKPVVTVARKSIAGFKIRDNYPVGCKVTLRRDQMFEFLDRLITIALPRVRDFRGVSGK SFDGRGNYNMGVREQIIFPEIEYDKIDALRGLNITITTTAKTDEEAKALLSLFKFPFKG >gi|289656326|gb|ADEA01000041.1| GENE 27 19868 - 20191 522 107 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225076406|ref|ZP_03719605.1| hypothetical protein NEIFLAOT_01451 [Neisseria flavescens NRL30031/H210] # 1 107 1 107 107 205 95 5e-52 MNKIIKGDQVVVITGKDKGKQGQVVRVLGGKVVVEGVNVVKRHQKPNPMRGIEGGIVSKE MPLDISNVAILNPETNKADRVGIKLIENEGKVKRVRFFKSNGSVIGA >gi|289656326|gb|ADEA01000041.1| GENE 28 20203 - 20571 604 122 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15676079|ref|NP_273210.1| 50S ribosomal protein L14 [Neisseria meningitidis MC58] # 1 122 1 122 122 237 100 2e-61 MIQMQTILDVADNSGARRVMCIKVLGGSKRRYASVGDIIKVAVKDAAPRGRVKKGDVYNA VVVRTAKGVRRPDGALIKFDNNAAVLLNNKLEPLGTRIFGPVTRELRTERFMKIVSLAPE VL >gi|289656326|gb|ADEA01000041.1| GENE 29 20799 - 21062 422 87 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225076404|ref|ZP_03719603.1| hypothetical protein NEIFLAOT_01449 [Neisseria flavescens NRL30031/H210] # 1 87 1 87 87 167 96 2e-40 MSENKNVRTLQGKVVSDKMDKTVTVLIERKVKHPLYGKIIRLSTKIHAHDENNQYGIGDV VVIAESRPLSKTKSWVVKELVEKARTV >gi|289656326|gb|ADEA01000041.1| GENE 30 21062 - 21253 300 63 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225076403|ref|ZP_03719602.1| hypothetical protein NEIFLAOT_01448 [Neisseria flavescens NRL30031/H210] # 1 63 1 63 63 120 98 3e-26 MKANELKDKSIEQLNADLLDLLKAQFGLRMQNATGQLGKSSELKRVRRDIARIKTILTEK GAK >gi|289656326|gb|ADEA01000041.1| GENE 31 21253 - 21669 704 138 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225076402|ref|ZP_03719601.1| hypothetical protein NEIFLAOT_01447 [Neisseria flavescens NRL30031/H210] # 1 138 1 138 138 275 98 4e-73 MLQPTRLKYRKQQKGRNTGIATRGNKVSFGEFGLKAVGRGRLTARQIEAARRTMTRHIKR GGRIWIRVFPDKPITEKPIQVRMGGGKGNVEYYIAEIKPGKVLYEMDGVPEALAREAFEL AAAKLPIPTTFVVRQVGQ >gi|289656326|gb|ADEA01000041.1| GENE 32 21653 - 22348 1145 231 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225076401|ref|ZP_03719600.1| hypothetical protein NEIFLAOT_01446 [Neisseria flavescens NRL30031/H210] # 1 231 1 230 230 445 97 1e-124 MGQKINPTGFRLAVTKDWASKWFAKSTDFSAVLKQDIDVRNYLRKKLANASVGRVVIERP AKSARITIHSARPGVVIGKKGEDIEVLKRDLQALMGVPVHVNIEEIRKPELDAQIIADGI AQQLEKRVQFRRAMKRAMQNAMRSGAKGIKIMTSGRLNGADIARSEWYREGRVPLHTLRA NVDYATSEAHTTYGVLGLKVWVYTEGNVKTSAKPEHEKKQRKAGGRNAAAN >gi|289656326|gb|ADEA01000041.1| GENE 33 22358 - 22687 537 109 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15676074|ref|NP_273205.1| 50S ribosomal protein L22 [Neisseria meningitidis MC58] # 1 109 1 109 109 211 99 9e-54 MRVNAQHKNARISAQKARLVADLIRGKDVAQALNILTFSPKKGAELIKKVLESAIANAEH NNGADIDELKVVTIFVDKGPSLKRFQARAKGRGNRIEKQTCHINVTVGN >gi|289656326|gb|ADEA01000041.1| GENE 34 22696 - 22974 477 92 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15676073|ref|NP_273204.1| 30S ribosomal protein S19 [Neisseria meningitidis MC58] # 1 92 1 92 92 188 100 8e-47 MARSLKKGPYVDLHLLKKVDAARASNDKRPIKTWSRRSTILPDFIGLTIAVHNGRTHVPV FISDNMVGHKLGEFSLTRTFKGHLADKKAKKK >gi|289656326|gb|ADEA01000041.1| GENE 35 22980 - 23813 1448 277 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|121634019|ref|YP_974264.1| 50S ribosomal protein L2 [Neisseria meningitidis FAM18] # 1 277 1 277 277 562 99 1e-159 MAIVKMKPTSAGRRGMVRVVTEGLHKGAPYAPLLEKKNSTAGRNNNGHITTRHKGGGHKH HYRVVDFKRNKDGIPAKVERIEYDPNRTAFIALLCYADGERRYIIAPRGIQAGAVLVSGA EAAIKVGNTLPIRNIPVGTTIHCIEMKPGKGAQIARSAGASAVLLAKEGAYAQVRLRSGE VRKINVDCRATIGEVGNEEQSLKKIGKAGANRWRGIRPTVRGVVMNPVDHPHGGGEGRTG EAREPVSPWGTPAKGYRTRNNKRTDNMIVRRRYSNKG >gi|289656326|gb|ADEA01000041.1| GENE 36 23819 - 24139 507 106 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|218767166|ref|YP_002341678.1| 50S ribosomal protein L23 [Neisseria meningitidis Z2491] # 1 106 1 106 106 199 100 3e-50 MGMNQQRLTQVILAPIVSEKSNVLAEKRNQMTFKVLANATKPEIKAAVELLFGVQVASVT TVTTKGKTKRFGRTLGRRSDVKKAYVSLAAGQELDLEAAAAAADKE >gi|289656326|gb|ADEA01000041.1| GENE 37 24130 - 24750 1023 206 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15676070|ref|NP_273201.1| 50S ribosomal protein L4 [Neisseria meningitidis MC58] # 1 206 1 206 206 398 98 1e-110 MELKVIDAKGQVSGSLSVSDALFAREYNEALVHQLVNAYLANARSGNRAQKTRAEVKHST KKPWRQKGTGRARSGMTSSPLWRKGGRAFPNKPDENFTQKVNRKMYRAGMAAILSQLARD ERLFAIEALTAETPKTKVFAEQVRNLGLEQVLFVTKQLDENVYLASRNLPNVLVLEAQQV DPYSLLRYKKVIITKDAVAQLEEQWV >gi|289656326|gb|ADEA01000041.1| GENE 38 24750 - 25394 1066 214 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15676069|ref|NP_273200.1| 50S ribosomal protein L3 [Neisseria meningitidis MC58] # 1 214 1 214 214 415 99 1e-115 MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDADGYTAVQVTFGQKKANR VNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV VRVDAERQLLLVKGAVPGAVNSDVVVRPSVKVGA >gi|289656326|gb|ADEA01000041.1| GENE 39 25656 - 25967 517 103 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225024696|ref|ZP_03713888.1| hypothetical protein EIKCOROL_01578 [Eikenella corrodens ATCC 23834] # 1 103 1 103 103 203 100 2e-51 MANQKIRIRLKAYDYSLIDRSAQEIVETAKRTGAVVKGPIPLPTKIERFNILRSPHVNKT SREQLEIRTHLRLMDIVDWTDKTTDALMKLDLPAGVDVEIKVQ >gi|289656326|gb|ADEA01000041.1| GENE 40 25985 - 27169 1584 394 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 393 1 406 407 614 74 1e-175 MAKEKFERSKPHVNVGTIGHVDHGKTTLTAALTTILAKKFGGAAKAYDQIDNAPEEKARG ITINTSHVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHI LLARQVGVPYIIVFMNKCDMVDDAELLELVEMEIRDLLSSYDFPGDDCPIVQGSALKALE GDAAYEEKIFELAAALDSYIPTPERAVDKPFLLPIEDVFSISGRGTVVTGRVERGVIHVG DEIEIVGLKETQKTTCTGVEMFRKLLDEGQAGDNVGVLLRGTKREEVERGQVLAKPGTIT PHTKFKAEVYVLSKEEGGRHTPFFANYRPQFYFRTTDVTGAVTLEEGVEMVMPGENVAIT VELIAPIAMEEGLRFAIREGGRTVGAGVVSSIIA >gi|289656326|gb|ADEA01000041.1| GENE 41 27258 - 29363 2054 701 aa, chain - ## HITS:1 COG:NMA0135 KEGG:ns NR:ns ## COG: NMA0135 COG0480 # Protein_GI_number: 15793163 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Neisseria meningitidis Z2491 # 1 701 1 701 701 1323 98.0 0 MARKTPISLYRNIGISAHIDAGKTTTTERILFYTGLTHKLGEVHDGAATTDYMEQEQERG ITITSAAVTSYWSGMAKQFPEHRFNIIDTPGHVDFTVEVERSMRVLDGAVMVYCAVGGVQ PQSETVWRQANKYQVPRLAFVNKMDRQGANFFRVVEQMKTRLRANPVPIVIPVGAEDSFS GVVDLLKMKSIIWNEADKGTTFTYGDIPAELVETAEEWRQNMIEAAAEASEELMDKYLGG DELTEEEIVGGLRQRTLAGEIQPMLCGSAFKNKGVQRMLDAVVELLPAPTDIPPVQGVNP NTEEADSRQASDEEKFSALAFKMLNDKYVGQLTFIRVYSGVVKSGDTVLNSVKGTRERIG RLVQMTAADRTEIEEVRAGDIAAAIGLKDVTTGETLCAESAPIILERMEFPEPVIHIAVE PKTKADQEKMGIALNRLAKEDPSFRVRTDEESGQTIISGMGELHLEIIVDRMKREFGVEA NIGAPQVAYRETIRKEVEAEYKHAKQSGGKGQYGHVVIKMEPMEPGGAGYEFIDEIKGGV IPREFIPSVDKGIRDTLPNGIVAGYPVVDVRVRLIFGSSHDVDSSQLAFELAASQAFKEG MRKANPALLEPIMAVEVETPEEYMGDVMGDLNRRRGVVLGMDDDGIGGKKVRAEVPLAEM FGYSTDLRSATQGRATYSMEFKKYSEAPAHVAAAVTEARKG >gi|289656326|gb|ADEA01000041.1| GENE 42 29382 - 29852 778 156 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|59802165|ref|YP_208877.1| 30S ribosomal protein S7 [Neisseria gonorrhoeae FA 1090] # 1 156 1 156 156 304 99 1e-81 MPRRREVPKRDVLPDPKFGSVELTKFMNVLMIDGKKSVAERIVYGALEQIEKKTGKAAIE VFNEAIANAKPIVEVKSRRVGGANYQVPVEVRPSRRLALAMRWVRDAARKRGEKSMDLRL AGELIDASEGRGGALKKREEVHRMAEANKAFSHFRF >gi|289656326|gb|ADEA01000041.1| GENE 43 29970 - 30341 645 123 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15676064|ref|NP_273194.1| 30S ribosomal protein S12 [Neisseria meningitidis MC58] # 1 123 1 123 123 253 100 3e-66 MPTINQLVRKGRQKPVYVNKVPALEACPQKRGVCTRVYTTTPKKPNSALRKVCKVRLTNG FEVISYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGSLDTAGVKDRKQARSKYGAK RPK >gi|289656326|gb|ADEA01000041.1| GENE 44 30538 - 34725 4840 1395 aa, chain - ## HITS:1 COG:NMA0141 KEGG:ns NR:ns ## COG: NMA0141 COG0086 # Protein_GI_number: 15793169 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, beta' subunit/160 kD subunit # Organism: Neisseria meningitidis Z2491 # 1 1387 1 1387 1391 2662 97.0 0 MNLLNLFNPLQTAGMEEEFDAIKIGIASPETIRSWSYGEVKKPETINYRTFKPERDGLFC AKIFGPVKDYECLCGKYKRLKFKGVTCEKCGVEVTLSKVRRERMGHIELAAPVAHIWFLK SLPSRLGMVLDMTLRDIERVLYFEAFVVTDPGMTPLQRRQLLTEDDYYNKLDEYGDDFDA KMGAEGIRELLRTLDVAGEIEILRQELESTGSDTKIKKIAKRLKVLEAFHRSGMKLEWMI MDVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELHAPDIIVRNEKRM LQEAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVITVG PYLRLHQCGLPKKMALELFKPFIFHKLEKQGLASTVKAAKKLVEQEVPEVWDILEEVIRE HPIMLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQM EARTLMLASNNVLSPANGEPIIVPSQDIVLGLYYMTRDRINAKGEGSLFADVKEVHRAYH TKQVELGTKITVRLREWVKNEAGEFEPVVTRYETTVGRALLSEILPKGLPFEYINKALKK KEISKLINASFRLCGLRDTVIFADHLMYTGFGFAAKGGISIAVDDMEIPKEKAALLAEAN AEVKEIEDQYRQGLVTNGERYNKVVDIWGRAGDKIAKAMMDNLSKQKVIDRDGNEVDQES FNSIYMMADSGARGSAAQIKQLSGMRGLMAKPDGSIIETPITSNFREGLTVLQYFIATHG ARKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTSDGFVMKAVVQGGDVIEALRDR ILGRVTASDVVDPSSGETLVEAGTLLTEKLVDMIDQSGVDEVKVRTPITCKTRHGLCAHC YGRDLARGKLVNAGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAASQVEAKSNGTA RFSSQMRYVANNKGELVVIGRSCEVVIHDDIGRERERHKVPYGAILMVQDGEAIKAGQTL ATWDPHTRPMITEHAGWVKFENVEEGVTVAKQTDDVTGLSTLVVIDGKRRSSSASKLLRP TVKLLDENGLEVCISGTSTPVSMTFPVGAVITVREGQEVGKGDVLARIPQATSKTRDITG GLPRVAELFEARIPKDAGMLAEITGTVSFGKETKGKQRLIITDSEGVAYETLISKEKQIL VHDGQVVNRGETIVDGAVDPHDILRLKGIEALARYIVQEVQEVYRLQGVKISDKHIEVII RQMLRRVNIVDSGETVFITGEQVERGDVMAENEKAVAENKEPARYENVLLGITKASLSTD SFISAASFQETTRVLTEAAIMGKQDELRGLKENVIVGRLIPAGTGLTYHRSRHQQWDDVE QIATETENLSNVATK >gi|289656326|gb|ADEA01000041.1| GENE 45 34891 - 39069 4016 1392 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163796927|ref|ZP_02190884.1| 30S ribosomal protein S12 [alpha proteobacterium BAL199] # 4 1391 8 1389 1392 1551 56 0.0 MNYSFTEKKRIRKSFAKRENVLDVPFLLATQIDSYAKFLQLENAFDQRTDDGLQAAFNSI FPIVSHNGYARLEFVHYTLGEPLFDIPECQLRGITYAAPLRARIRLVILDKEASKPTVKE VRENEVYMGEIPLMTPSGSFVINGTERVIVSQLHRSPGVFFEHDRGKTHSSGKLLFSARI IPYRGSWLDFEFDPKDLLYFRIDRRRKMPVTILLKALGYNNEQILDIFYDKETFYLSENG VQTDLVVGRLKGETAKVDILDKEGNVLVAKGKRITAKNIRDISNAGLTRLDVEPESLIGK ALAADLIDPETGEVLAVANDEITEELLAKFDIHGVKQLTTLYINELDQGGYISNTLRTDE TADQQAARVAIYRMMRPGEPPTEEAVEQLFNRLFFSEDSYDLSRVGRMKFNTRTYEQKLS EVQQQSWYGRLLNETFAGAAEKGGYVLSVEDIVASIATLVELRNGHGEVDDIDHLGNRRV RSVGELTENQFRSGLARVERAVKERLNQAESENLMPHDLINAKPVSAAIKEFFGSSQLSQ FMDQTNPLSEVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLIN SLSVYARTNDYGFLETPYRRVIDGKVTEEIDYLSAIEEGRYVIAQANADLDKDGNLIGDL VTCREKGETIMATPDRVQYMDVATGQVVSVAASLIPFLEHDDANRALMGANMQRQAVPCL RPEKPMVGTGIERSVAVDSATAIVARRGGVVEYVDANRVVIRVHDDEATAGEVGVDIYNL VKFTRSNQSTNINQRPAVKAGDVLQRGDLIADGASTDLGELALGQNMTIAFMPWNGYNYE DSILISEKVAADDRYTSIHIEELNVVARDTKLGAEDITRDIPNLSERMQNRLDESGIVYI GAEVEAGDVLVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRMPTGMSGTVIDVQV FTREGIQRDKRAQSIIDSELKRYRQDLGDQLRIFDNDAFDRIERMIVGQKANGGPMKLAK GSEISTEYLAGLPSKHDWFDIRLSDEDLAKQLELIKLSLQQKREEADELYEIKKKKLTQG DELQPGVQKMVKVFIAIKRRLQAGDKMAGRHGNKGVVSRILPVEDMPYMADGRPVDIVLN PLGVPSRMNIGQILEVHLGWAAKGIGERIDRMLKEQRKASELREFLNKLYNGSGKKEDLD ALTDEEIIELAFNLRKGASFASPVFDGAKESEIREMLNLAYPSDDPEVEKLGFNDSKTQI TLYDGRSGEPFDRKVTVGVMHYLKLHHLVDEKMHARSTGPYSLVTQQPLGGKAQFGGQRF GEMEVWALEAYGAAYTLQEMLTVKSDDVTGRTKMYENIVKGEHKIDAGMPESFNVLVKEI RSLGLDIDLERY >gi|289656326|gb|ADEA01000041.1| GENE 46 39258 - 39629 584 123 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225076432|ref|ZP_03719631.1| hypothetical protein NEIFLAOT_01478 [Neisseria flavescens NRL30031/H210] # 1 123 1 123 123 229 100 3e-59 MAITKEDILEAVGSLTVMELNDLVKAFEEKFGVSAAAVAVAGPAGAGAAAAEEKTEFDVV LASAGDQKVGVIKVVRAITGLGLKEAKDIVDGAPKTLKEGVSKAEAEDIQKQLEEAGAKV EIK >gi|289656326|gb|ADEA01000041.1| GENE 47 39688 - 40188 774 166 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15676058|ref|NP_273188.1| 50S ribosomal protein L10 [Neisseria meningitidis MC58] # 1 166 1 166 166 302 98 3e-81 MSLNIETKKVAVEEISAAIANAQTLVVAEYRGISVSSMTELRANARKEGVYLRVLKNTLA RRAVEGTSFAALADQMVGPLVYAASEDAVAAAKVLHQFAKKDDKIVVKAGSYNGEVMNAA QVAELASIPSREELLSKLLFVMQAPVSGFARGLAALAEKKAGEEAA >gi|289656326|gb|ADEA01000041.1| GENE 48 40416 - 41111 1121 231 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15676056|ref|NP_273186.1| 50S ribosomal protein L1 [Neisseria meningitidis MC58] # 1 231 1 231 231 436 98 1e-121 MAKVSKRLKALRSSVEANKLYAIDEAIALVKKAATAKFDESVDVSFNLGVDPRKSDQVIR GSVVLPKGTGKITRVAVFTQGANADAAKEAGADVVGFEDLAAEIKAGNLNFDVVIASPDA MRIVGQLGTILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVQYRTDKAGIVHATIGRASF AEADLKENFDALLDAIVKAKPAAAKGQYLKKVAVSSTMGLGVRVDTSSVNN >gi|289656326|gb|ADEA01000041.1| GENE 49 41111 - 41545 715 144 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|121634005|ref|YP_974250.1| 50S ribosomal protein L11 [Neisseria meningitidis FAM18] # 1 144 1 144 144 280 99 2e-74 MAKKIIGYIKLQIPAGKANPSPPVGPALGQRGLNIMEFCKAFNAATQGMEPGLPIPVVIT AFADKSFTFVMKTPPASILLKKAAGLQKGSSNPLTNKVGKLTRAQLEEIAKTKEPDLTAA DLDAAVRTIAGSARSMGLDVEGVV >gi|289656326|gb|ADEA01000041.1| GENE 50 41652 - 42185 509 177 aa, chain - ## HITS:1 COG:NMA0147 KEGG:ns NR:ns ## COG: NMA0147 COG0250 # Protein_GI_number: 15793175 # Func_class: K Transcription # Function: Transcription antiterminator # Organism: Neisseria meningitidis Z2491 # 1 177 1 177 178 291 88.0 3e-79 MSKRWYVVQAYSGFEKNVQKTLKERIAREGMEGYFGQILVPVEEVVDIKNGRKTISERKF YPGYVLVEMEMTDDSWHLVKSTPRVSGFIGGTANKPTPISQREADAILQQVRSGVEKPKP KVEFEVGQQVRVNEGPFADFNGIVDEVNYERNKLRVSVQIFGRETPVELEFGQVEKI >gi|289656326|gb|ADEA01000041.1| GENE 51 42662 - 43846 1584 394 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 393 1 406 407 614 74 1e-175 MAKEKFERSKPHVNVGTIGHVDHGKTTLTAALTTILAKKFGGAAKAYDQIDNAPEEKARG ITINTSHVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHI LLARQVGVPYIIVFMNKCDMVDDAELLELVEMEIRDLLSSYDFPGDDCPIVQGSALKALE GDAAYEEKIFELAAALDSYIPTPERAVDKPFLLPIEDVFSISGRGTVVTGRVERGVIHVG DEIEIVGLKETQKTTCTGVEMFRKLLDEGQAGDNVGVLLRGTKREEVERGQVLAKPGTIT PHTKFKAEVYVLSKEEGGRHTPFFANYRPQFYFRTTDVTGAVTLEEGVEMVMPGENVAIT VELIAPIAMEEGLRFAIREGGRTVGAGVVSSIIA >gi|289656326|gb|ADEA01000041.1| GENE 52 44286 - 44537 240 83 aa, chain - ## HITS:1 COG:NMB0123 KEGG:ns NR:ns ## COG: NMB0123 COG1145 # Protein_GI_number: 15676051 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Neisseria meningitidis MC58 # 1 83 1 83 83 131 97.0 3e-31 MSLFITDECINCDVCEPECPNDAISQGEEIYEINPNLCTQCVGHYDEPQCQQVCPVDCIL IDEEHPETHEELMAKYEKIISFK >gi|289656326|gb|ADEA01000041.1| GENE 53 44656 - 45225 373 189 aa, chain - ## HITS:1 COG:NMB0122 KEGG:ns NR:ns ## COG: NMB0122 COG0742 # Protein_GI_number: 15676050 # Func_class: L Replication, recombination and repair # Function: N6-adenine-specific methylase # Organism: Neisseria meningitidis MC58 # 1 189 1 189 189 253 66.0 1e-67 MVNTKHNKHVNQVRIIGGQCRGRKLTFVSAEGLRPTPDSVREKLFNWLGQDLTGLTVLDL FSGSGALGFEAASRNAAKVVMVDNNRQTVLNLQQINRQLKLDAEIVFSDGLTYLKDCGEQ FDVVFLDPPFVWQDWEKLLIVLKEHLKNDAMVYIEAWGLPPIPVWIQEWRSGKAGMSRFK LLKYMQVTE >gi|289656326|gb|ADEA01000041.1| GENE 54 45408 - 47714 3165 768 aa, chain - ## HITS:1 COG:NMA0156_1 KEGG:ns NR:ns ## COG: NMA0156_1 COG0550 # Protein_GI_number: 15793183 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Neisseria meningitidis Z2491 # 1 570 1 570 570 1082 97.0 0 MAKNLLIVESPSKAKTLKKYLGGDFEILASYGHVRDLIPKNGAVDPEHDFAMKYELIKRN AKHVDAIVAGAKEAENIYLATDPDREGEAISWHLYEILKTKRGLKNIKPQRVVFHEITKN AVLDAVANPREIEMDLVDAQQARRALDYLVGFNLSPLLWKKIRRGLSAGRVQSPALRLIC ERENEIRAFEAQEYWTVHLDSHKGRSKFTAKLAQYNGAKLEQFDLPNEAAQADVLKELEG KEAVVTAIEKKKRSRNPAAPFTTSTMQQDAVRKLGFTTDRTMRTAQQLYEGIDVGQGATG LITYMRTDSVNLADEALTEIRHYIENKIGKEYLPSAAKQYKTKSKNAQEAHEAIRPTSVY RTPESVKPFLSADQFKLYQMIWQRTVACQMTPAKFDQTTVDITVGKGVFRVTGQVQTFAG FLSVYEESSDDEEGEDSKKLPEMSEGDKLPVDKLYGEQHFTTPPPRYNEATLVKALEEYG IGRPSTYASIISTLKDREYVTLEQKRFMPTDTGDIVNKFLTEHFAQYVDYHFTAKLEDQL DEIADGKRRWIPVMDKFWKPFIKQVEEKEGIERAKFTTQELDETCPKCGEHKLQIKFGKM GRFVACAGYPECSYTRNVNETAEEAAERIAKAEAEQAELDGRECPKCGGRLVYKYSRTGS KFIGCANYPKCKHVEPLEKPKDTGVQCPQCKKGNLVERKSRYGKLFYSCSTYPDCNYATW NPPVAEECPNCHWPVLTIKTTKRWGVEKVCPQKECGWKEQIEPPAPKE >gi|289656326|gb|ADEA01000041.1| GENE 55 47790 - 48245 738 151 aa, chain - ## HITS:1 COG:NMA0157 KEGG:ns NR:ns ## COG: NMA0157 COG2922 # Protein_GI_number: 15793184 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 144 1 144 153 222 80.0 2e-58 MAEVIAFLIEHFQDFDACPPPEDLGRLLEDAGFDATEIGNTLMMLEVLLNSSEFAAEPLD SQSVRVYSSEETDNLPQEVMGLMQYLVSERAITYEQREIVIHALMHIPSEEITVDTAKVL TLLVLWAHKSELPVLIGDDLMAALNGKAVMH >gi|289656326|gb|ADEA01000041.1| GENE 56 48261 - 49442 1034 393 aa, chain - ## HITS:1 COG:NMB0116 KEGG:ns NR:ns ## COG: NMB0116 COG0758 # Protein_GI_number: 15676044 # Func_class: L Replication, recombination and repair; U Intracellular trafficking, secretion, and vesicular transport # Function: Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake # Organism: Neisseria meningitidis MC58 # 1 393 1 397 397 545 76.0 1e-155 MNETERFAWLQLAFTPYVGAESFLILLQYFGSAQAALDAPAEKIAALVRHKQAAEAWRNV EKRHLAQKSAEAALKWETQDGCRLMLLQDQDFPEMLTQGITAPPVLFLRGDAGLLHKYSA AIVGSRHATPQAMRIAKDFGRALSEKGIPVVSGMASGIDTAAHQGALQAGGGTIAVWGTG IDRIYPPSNKSLAYEIAEKGLIVSEFPLDTRPLAGNFPRRNRLIAALSQVTLVVEAALES GSLITAKLAAEMGREVMAVPGSIDNPHSKGCHKLIKDGAKLVECLDDIVQECPQLLQNSP LLPYAIKRDTSETRKPEPPATVGRPSENVGTEAGRQAASSPLLDAMGYDPVHPDTLAQQL QFPAADVYAELLELELDGKVASLAGGRYQRIET >gi|289656326|gb|ADEA01000041.1| GENE 57 50055 - 51533 1509 492 aa, chain + ## HITS:1 COG:ECs5093 KEGG:ns NR:ns ## COG: ECs5093 COG0477 # Protein_GI_number: 15834347 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 4 492 5 499 500 629 62.0 1e-180 MIAKTHRPLKLNDITIIERADTKKAISAAALGNAIEWFDFGVYGFVAFALGKIFFPDASP SVQTIAALGTFSVPFIFRPLGGLVFGALGDKIGRQRVLAMTIIVMSLSTFGIGLIPSYDS IGIWSPIILLLLKIAQGFSVGGEYAGASIFVAEYSPDRRRGFMASWLDFGSILGFLLGAG MVSALHLLLGDSKFMEWGWRIPFFLALPLGIIGLYLRHALDETPVFQEHTVNMPHEKKNK TSLRDLFRKHKRNFLICSGIVLTTNVTYYMLLTYLPSYFSHNLGYPENHGVLIIIAVMIG MLFVQPLIGWLSDKYGRRPFILTGSLSLLFFSWPSFYLLTTGKPVLIFFGLLVLALSLNM LIGVMAATLPALFPTSIRYSGLAVVFNISIVLAGLTPTITSFLVETTHNLHIPAFYLMIF GLFGLMAAKLMHEPANKPLTGGKPLASDKAEAKELLAEHHDRIEESIEAIDERIKELQRK REILAAQHPHID >gi|289656326|gb|ADEA01000041.1| GENE 58 51625 - 52899 1525 424 aa, chain - ## HITS:1 COG:NMA0159 KEGG:ns NR:ns ## COG: NMA0159 COG2204 # Protein_GI_number: 15793186 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains # Organism: Neisseria meningitidis Z2491 # 1 420 1 422 425 563 70.0 1e-160 MRSSDILIVDDEVGIRDLLSEILQDEGYSVALAENAEEARQLRHQVRPAMVLLDIWMPDC DGITLLKEWAKNGQLNMPVVMMSGHASIDTAVEATKIGALDFLEKPITLQKLLSTVDRAL KHGEMQAASGLSLDKLGNSPVIQDLNHKLEAAAKQSGPVLLSGEVGSPFELVARHLRKNG TPWVEPAKVEHIVDTPLELLQKATGGVLYVGDIAQYSKNIQNGIVFLLGKADRYNVRIIA ANSRGNEETAVQDGRLLELLSKTVVALPPLRSQPDDIAFLVNQIVTELADTQKIQPVKFS SGALAVLRQYEWPGNFDQLRGVVKSLALGADGGEVEEQEVGTALGRTSQSFSSEIVGGFN FNMPLRELREELERRYFEYHIAQEGQNMSRVAQKVGLERTHLYRKLKQLGISVSRRSGDK GADE >gi|289656326|gb|ADEA01000041.1| GENE 59 52886 - 55018 2389 710 aa, chain - ## HITS:1 COG:NMA0160 KEGG:ns NR:ns ## COG: NMA0160 COG5000 # Protein_GI_number: 15793187 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation # Organism: Neisseria meningitidis Z2491 # 1 708 1 706 706 1013 76.0 0 MRRFLPIAALLAVLLLYGLTVATGSGSSLADYFWWMIALCVLLMVVLASVLVRYVLLLMR DGSSGVFGSQIARRLSGMFTLVAVLPGVFLFGISAQFINGTINSWFGNDTHEALERSLNL SKSALNLAVDNAVSNATPVQIDLIGASSLDNDLAKALEENAKRGEFAQLALYNVERGKFE KSINPLKLNQPAIGAQDRELLLQSGSVRGLENIGNILYAQGWLSLGKYRGQDYALFFRQP IPKNVAEDATLIESARAKYAELSYTKKGLQTFFLVTLLVATLLAIFLALVMALYFARRFV EPVLSLAEGARAVAQGDFTQRRPIFRNDEFGRLTHLFNHMTEQLAIAKEADERNRLQQEA ARHYLECVLESLTTGVITLDSAGRLKTFNKAAERILGVPLMPLSGSIWQDWNGQSPQQTI LAEAFAAIAETAGGSKPVQVGYAAPDDARILLGKATELPDDNDNGLVMVIDDITVLVRAQ KEAAWGEVAKRLAHEIRNPLTPIQLSAERLAWKLHDKLDEQSAHILTRSTDTIIKQVAAL KEMVEAFRNYARAPSLNLEKHDLNCLIEEVLLLYEGGACTFTAKLSKIPLWIAADTTAMR QVLHNIFKNAAEAAESDGQPSVTVATGQTEDGAEAVLTVCNNGKSFSKEMLHNAFEPYVT DKPTGTGLGLPVVKKIIEEHGGRISLSNRPDGGACVKTALPRLVETYAQQ >gi|289656326|gb|ADEA01000041.1| GENE 60 55022 - 55615 668 197 aa, chain - ## HITS:1 COG:no KEGG:NMO_1924 NR:ns ## KEGG: NMO_1924 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 1 194 19 213 217 267 68.0 2e-70 MAFITRLLKNSKLFLLPLLLAVSLHASGEGISATRAEAVLTASGQLAVSSRFQVELPDQL KQALRQGVPLNFTLSCQLSAPTVAAYRFRIGQFVNDDSSVQYKLSFHPLTNRYRVTVGTF STEYDQLETALRGIGAIANWKVLDSGTLSGVSPKEAKAEVRLLMSTAKLPKPFQINALTS KNWHLDSGWKSLSITQE >gi|289656326|gb|ADEA01000041.1| GENE 61 55581 - 56864 1101 427 aa, chain - ## HITS:1 COG:NMA0162 KEGG:ns NR:ns ## COG: NMA0162 COG0144 # Protein_GI_number: 15793189 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA and rRNA cytosine-C5-methylases # Organism: Neisseria meningitidis Z2491 # 1 427 1 419 419 739 87.0 0 MSMSLAQQLAAESIAAVAKGRNLQDVLAAIRAAHPELTAQENGALQDIAYGCQRYLGSLK HMLAQMLKKPIDNPQLESLLLAAMYQLHYTRNAPHAVVNEAVESIAKIGRGQFRSFANAI LRRFLRERQKLEALCKKDDVAKHNLPLWWVAYLKNHYPKHWHNITTALQSHPPMALRVNR RHGNAEVYLEKLAAEGIAAKALDEYAVTLEEAVPVNRLPGFSDGLVSVQDFGAQQAAYLL NPKDGERILDACAAPGGKTGHILELADCHVTALDIDAGRLKRVGDNLDRLGFGETRKTRF QTASLYCADARDLAAWYDGKQFDAVLADVPCTASGVVRRNPDIKWSRRPTDAVKTARQQE ALLDALWQTLTKNGRMLLATCSVFVEENTQQLQKFLNRHADAKPAGEHVLLPNKYQDGFY YALIEKQ >gi|289656326|gb|ADEA01000041.1| GENE 62 56975 - 57901 1221 308 aa, chain - ## HITS:1 COG:NMA0163 KEGG:ns NR:ns ## COG: NMA0163 COG0223 # Protein_GI_number: 15793190 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA formyltransferase # Organism: Neisseria meningitidis Z2491 # 1 308 1 308 308 502 89.0 1e-142 MKVIFAGTPDFAAAALKAIAAAGFEIPLVLTQPDRPKGRGMQLAPSPVKQAALELGLHVA QPEKLRNNAEALQMLKGVDADVMVVAAYGLILPQDVLDTPKHGCLNIHASLLPRWRGAAP IQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTDTANEVHDALMSLGAAAIVAD LQQLKTEGRLKSVKQPEEGVTYAQKLSKEEARINWNESAAVIERKIRAFNPVPAAWVEYQ GKPMKIWRAEAVAQQGRAGEVLSCSADGLVVACGENALKITELQPSGSKRMDIAAFAAGH TVEAGTVL >gi|289656326|gb|ADEA01000041.1| GENE 63 58061 - 58606 320 181 aa, chain - ## HITS:1 COG:no KEGG:MCP_1401 NR:ns ## KEGG: MCP_1401 # Name: not_defined # Def: hypothetical protein # Organism: M.paludicola # Pathway: not_defined # 4 157 43 195 222 70 32.0 3e-11 MAFALLLHIFEEEFFPGGFGFSFNTVKNPKDYSDCYPMNPMISMTVNFLGVLFLTISAFF PSLYFLGIGVAVFWGLEVVLHTVLAFLPRAKGLPLYSPGLLTAWLAGGFCAYRYLHTVIS ENLLSGYDWALGIIYLFAGIILVIRIPEDRLSDKNSPFKYENDREFYGFFYRYIKQRYQL K >gi|289656326|gb|ADEA01000041.1| GENE 64 59041 - 59544 878 167 aa, chain - ## HITS:1 COG:NMA0164 KEGG:ns NR:ns ## COG: NMA0164 COG0242 # Protein_GI_number: 15793191 # Func_class: J Translation, ribosomal structure and biogenesis # Function: N-formylmethionyl-tRNA deformylase # Organism: Neisseria meningitidis Z2491 # 1 167 1 167 167 296 96.0 1e-80 MALLNILQYPDERLHTVAKSVGKVDERIQKLVADMFETMYEARGIGLAATQVDVHERVVV MDLTEDRSEPRVFINPVIVEKDGETTYEEGCLSVPGIYDTVTRAERVKVEALNEKGEKFT LEADGLLAICVQHELDHLMGIVFVERLSQLKQGRIKTKLKKRQKHTI >gi|289656326|gb|ADEA01000041.1| GENE 65 59838 - 61118 1794 426 aa, chain + ## HITS:1 COG:NMB0109 KEGG:ns NR:ns ## COG: NMB0109 COG1652 # Protein_GI_number: 15676037 # Func_class: S Function unknown # Function: Uncharacterized protein containing LysM domain # Organism: Neisseria meningitidis MC58 # 1 397 39 429 443 504 61.0 1e-142 MQKRIITLLCAASMAVSAQIHAAALKVRPNAPQRYVVKQGDTLWGISGKYLYSPWQWNRL WGANRSDVRNPHMIYPGQVLLLRYVNGQPRLGFESSSFNSDGIPVIKLHPRVREASSGYG IQTVNVNFYRMFMQHPQIIDQMKTQNAPKLIEGPDNRLMYSKGERVYAYGITEPGRYLVY RATKDITDPDTHKYLGQEVVFSGIVSTLPYTNSALEAASDKDKEYLKEGEYYTRIHPLAK VPTQTAQPMVVEEAVSEIRKGDFLLKMTDEGKSFQMMPHAPTRHIDAKVVSIFDGVSEAG QFQTITLNKGEADGLDKGTVLSLYKRSRQVKVDLENGKKGSKSVVKYVSIPAEEVGLAMV YRTGERLASAIILESLTSVNIGDTASEPGRDLDNMADDKPHVRNEPQDSHDTRNNEYNFH SNINLY >gi|289656326|gb|ADEA01000041.1| GENE 66 61481 - 62095 635 204 aa, chain - ## HITS:1 COG:no KEGG:NMO_1929 NR:ns ## KEGG: NMO_1929 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 1 204 3 206 221 189 45.0 4e-47 MPSNVQTRSAPLLYVLIYFAGFLTACLWFNPQDYLSDLAPTVTAVAALTAAWLVCLLVMY KVRSQTEWMQREQRIQREQIHPVLHAAIRRMEGSPATLVLSVKNHGKGAAGKVRFHIEAL PNHAASNAVTAAASRLPVFSDGLDMLAAGETYSGAFADVEELTAQLPPNGLSGVVKLRLE YQNTFGETCKSENVLELAGLNRAV >gi|289656326|gb|ADEA01000041.1| GENE 67 62403 - 62861 793 152 aa, chain - ## HITS:1 COG:NMA0167 KEGG:ns NR:ns ## COG: NMA0167 COG1781 # Protein_GI_number: 15793194 # Func_class: F Nucleotide transport and metabolism # Function: Aspartate carbamoyltransferase, regulatory subunit # Organism: Neisseria meningitidis Z2491 # 1 152 1 152 152 273 88.0 7e-74 MENKKLSVEAIENGTVIDHIPAGLGLTILRQFKLLHYGSAVTVGFNLPSKTQGSKDIIKI SGVAFDDAAANRLALFAPEATVNTIADFKVVDKRHLTLPDEIAEVFRCPNANCASHGEPV KSRFYVKTQNGQTRLKCHYCEKTYSRDSVAEA >gi|289656326|gb|ADEA01000041.1| GENE 68 62871 - 63791 1430 306 aa, chain - ## HITS:1 COG:NMA0168 KEGG:ns NR:ns ## COG: NMA0168 COG0540 # Protein_GI_number: 15793195 # Func_class: F Nucleotide transport and metabolism # Function: Aspartate carbamoyltransferase, catalytic chain # Organism: Neisseria meningitidis Z2491 # 1 306 1 306 306 583 92.0 1e-166 MPNPLYRQHVISISDLSTEQLELLLQTALKLKEHPRDDLLEGKLIGSCFFEPSTRTRLSF ETAVQRLGGKVIGFSDGANTSAKKGETLADTARIISSYTDAIIQRHPKDGAARVSAEFSK VPVINAGDGTNQHPSQTLLDLVTIYETQGRLNNLKIAMAGDLKYGRTVHSLCQALKRWDC EFAFVSPPSLAMPEYITEELEAAGCRYQILPDLETAVEWADILYMTRVQRERFDEQEFAK IQGKFNLNAAMLANARPNLRVLHPLPRVDEIHPDVDATPHAYYFEQATNGVYARMAILSL VLNEEV >gi|289656326|gb|ADEA01000041.1| GENE 69 64087 - 64944 1211 285 aa, chain + ## HITS:1 COG:NMA0169 KEGG:ns NR:ns ## COG: NMA0169 COG0454 # Protein_GI_number: 15793196 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Neisseria meningitidis Z2491 # 1 285 1 280 280 421 75.0 1e-118 MLVCNPYEVVIHGTTSKGKIFRPSDWAERLCGILSSFDKDNRLSYSNWVRPILVDKVRCV AVDKKLEEANPPMFRFLMDFAADNDLRIIDCKQLLEERESGVQEAVPETQVLLAQAVEEK HAAEREESVLPIKTGAEAAETVLREITAEETATAFAALSVLRPTLTDINRFVEQINTRQR AAGYRLFGIFEEGKHNAVSVCGFHEAFNLASGHHLHIDDIVTLPQSRNKGYASRLLREVR KTAAEAGIAKIHLNVHVDQERAPAHRLYFNNGFSISAYHFRCDAQ >gi|289656326|gb|ADEA01000041.1| GENE 70 64976 - 65110 194 44 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MMKSLSLAALLLLAACAGVSGNGGTEMYGEITTGVETGRTTFGR >gi|289656326|gb|ADEA01000041.1| GENE 71 65227 - 66657 1954 476 aa, chain - ## HITS:1 COG:NMA0178 KEGG:ns NR:ns ## COG: NMA0178 COG2067 # Protein_GI_number: 15793206 # Func_class: I Lipid transport and metabolism # Function: Long-chain fatty acid transport protein # Organism: Neisseria meningitidis Z2491 # 3 476 4 464 464 535 63.0 1e-152 MKTPLKTIAAFLGAVFSVQPVLASGYHFGTQSVTAQSTANAAAAEAVDASTIFYNPAGLA KLENSEITAAANIVMPHIEYSGAEAAYRRTGTAVGGETSGTITKKATFAPHLYGAYKAGD VTVGLGVYVPFASATDYSGQSVLRHHLNRLGLTSIAVEPVVAYKFNDKHSVGAGLIAQHS SAELRKYADWDASGTVSALASRQASQAAGRPVSVDATGHADGHAEVKGKDWGFGYQFAWL WDINDRVRVGANYRSKVKHKLKGSADWYADGDYVKPVYAARIGVPVAAGGSGYVPHEKAE VEIVTPESLSLHGMYKATDRFNLFGDVTWTRHSRFNKAELVFENTKAIGVGKTSDRTVIT PNWRNTYKVAVGGSYQYSEPLQLRAGIAFDQSPVRGAQSRLNTLPDGNRIWYSLGAKYTL RKNHVFDVAYSHIHINDTTFFAAASTGDNVDSKGTAYAKFRNYANIVGLQYSYKFK >gi|289656326|gb|ADEA01000041.1| GENE 72 66884 - 67639 926 251 aa, chain + ## HITS:1 COG:NMB1608 KEGG:ns NR:ns ## COG: NMB1608 COG0500 # Protein_GI_number: 15677458 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Neisseria meningitidis MC58 # 1 245 1 245 250 321 66.0 9e-88 MTTVCLTDSATDSARRLAEQFGLTVAASPPEAGEYLLADSDGLNLCRAGEKGRVKVDFSG GVAQYRRTKGGGELIAKAVNHTAWPTVWDATGGLGRDSFVLASLGLSVHAFEQNPAVACL LSDGLTRALQDDDIRDIAQRITLHFGDACALMPELALQAGRPDVVYLDPMYPERQKSAAV KKEMAYFHGLVGASQDEAALLAAARTVARKRIVVKRPRLGVFLNGEEPAYQYAGKSTRFD VYLPFSPVTEK >gi|289656326|gb|ADEA01000041.1| GENE 73 67703 - 69034 1548 443 aa, chain - ## HITS:1 COG:CC2283 KEGG:ns NR:ns ## COG: CC2283 COG0477 # Protein_GI_number: 16126522 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Caulobacter vibrioides # 9 418 44 516 541 183 32.0 5e-46 MKVSPQVAMTLRQIMLMNFGFFGIQYSFGLQQTAINPIFSFLNPDPSILPYLNMAGPVTG LIVQPLIGAMSDRTWIPGLGRRRPYFLIGAIGCSLCLFLYPHVTALWMAVLLLWLLDISN NTAMEPFRAFIADTVPEHQQSTGFLMQSVFTGLGITLANISLYLLQQVGWLNQTSAAGIP YWVFGSFYIGAVCSIGSVLVTVLSTPEHEPSPEEMAAIKAQPSGPVHAIKDIGIAIKEMP TPLWQLASVYLFQWYALFVYWQYISHSIVQSVWHSTSADKAAYEQAVAWTGLVNGFYNVV TFISAFGLMWMTRRYAAKYVHAFAVTLAALALLAIPHITDKYLMFAPMIGFGIGWASMMG VPFMIVVHSIPKERYGVYMGIVNMMIVIPMFIETVTFSWIYKTFLGANPSNAMIFAGVFL VIAASLTVMIKTSNKPVGVSENA >gi|289656326|gb|ADEA01000041.1| GENE 74 69298 - 70335 1068 345 aa, chain - ## HITS:1 COG:mll4964 KEGG:ns NR:ns ## COG: mll4964 COG1609 # Protein_GI_number: 13474146 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Mesorhizobium loti # 6 315 3 309 341 155 36.0 1e-37 MATIYDVAARAGVSPKTVSRVINGDAAVSDATREKVETAIAALGYIPSSAARIMRSNRSG LVGLITGAISRTGEAFRVHGLPDMFLIKGIQQQMRAAGKTLMIADTANRADQIEPLIRTF MEHRAEGILYVAEYHQEVALPEITNACPIVLVNCFDASGTPSVLPDDEQGQYDLVRQIIR HGHTRIAYVTLPPGIEATRLRIQGYRRALEGAGIAFDPELLQTGYPDHSNDSEPLLAAIL RLTALPQPPSVICCGNDEMAVRVYGILRTRGLRVPEQVSVAGYDNHSAIAETLFPPLTST ELPYMRMGALAADMLLGAADGKKETGHIVRVAGETIWRQSVVSLK >gi|289656326|gb|ADEA01000041.1| GENE 75 70345 - 70497 118 50 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298370628|ref|ZP_06981943.1| ## NR: gi|298370628|ref|ZP_06981943.1| hypothetical protein HMPREF9016_02306 [Neisseria sp. oral taxon 014 str. F0314] # 1 50 1 50 50 93 100.0 4e-18 MREKKAAWLRSVCFTLGDCLISVNFVLKIQYDTDVSCDMLCNNIENYSGV >gi|289656326|gb|ADEA01000041.1| GENE 76 70877 - 72517 2158 546 aa, chain + ## HITS:1 COG:NMA2154 KEGG:ns NR:ns ## COG: NMA2154 COG0166 # Protein_GI_number: 15795025 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-phosphate isomerase # Organism: Neisseria meningitidis Z2491 # 6 545 1 540 547 739 64.0 0 MKESLMTTQSPAWQKLAEHQQATSQLHMRDLFAADANRFDAMHETLHGLLFDYSKNRITE ETLTLLCNLADSAQVKQRMQAMRRGDKINTSENRASLHIALRLPENADPIMVDGENIVPK VHTELNRALSFAGSIIDGSHTGITGKRITDLVHIGIGGSDLGPQMGAQALYFYRTGVRVH FVSNSDDADIAQTLTALDPETTVFSIASKSFGTPETLLNGQAARDWYLQHGLPEEGISHH FCAISSNVGAAIKFGIPPERVFGMFDWVGGRYSIWSTIGFPMMVAVGPENFREFLRGAHA MDEHFFNTEFRHNIPVLMALLNVWYNNFYHSDGHTTVPYSHNMRRFTAWLNQLDMESCGK QRTIDGKPVDCITGGIIFGEEGPNCQHAYFQLLHQGTRLIPADFIVPMTTPYGIGRQNRF TVANAFAQAEALMKGKTLEEARAELSALPEAEREKLAPQKEFPGNRPSNSFLFDKLDPFN LGMLMAAYEHRTFVQGVIWNINPFDQWGVEYGKVLAKAIEPELESGTSAHDSSTNGLVAF YRQCQK >gi|289656326|gb|ADEA01000041.1| GENE 77 72610 - 73431 1222 273 aa, chain - ## HITS:1 COG:NMA2153 KEGG:ns NR:ns ## COG: NMA2153 COG2171 # Protein_GI_number: 15795024 # Func_class: E Amino acid transport and metabolism # Function: Tetrahydrodipicolinate N-succinyltransferase # Organism: Neisseria meningitidis Z2491 # 1 273 1 273 273 517 97.0 1e-146 MSLQNIIETAFENRADISPSTVIPEVKEAVLETIRQLDSGKLRVAERLGVGEWKVNEWAK KAVLLSFRIQDNEVLNDGVNKYFDKVPTKFADWSEDEFRAAGFRAVPGAVARRGSFVAKN VVLMPSYVNIGAYVDEGAMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQASPTIIED NCFIGARSEIVEGVIVEEGSVISMGVFIGQSTKILDRTTGEIYQGRVPAGSVVVSGSMPS KDGSHSLYCAVIVKRVDAQTRAKTSVNELLRGI >gi|289656326|gb|ADEA01000041.1| GENE 78 73657 - 75150 1407 497 aa, chain - ## HITS:1 COG:NMB0089 KEGG:ns NR:ns ## COG: NMB0089 COG0469 # Protein_GI_number: 15676021 # Func_class: G Carbohydrate transport and metabolism # Function: Pyruvate kinase # Organism: Neisseria meningitidis MC58 # 9 496 1 489 490 787 88.0 0 MPDWKGRFMNTSKRDLTRIRHNTKIVATLGPGSNNVQLLEDMIRVGGLNVVRFNFSHGTA EFHQENARIVREAAKRAGQEIAILADLQGPKIRVGKIEGGSIQLNKGEKLVLDAALEGEG TREAVGLDYRDLPKDVQSGDVLWLDDGLLTLTVDSVDGSKITTTVENSHELKSNKGINKR GGGLSAGALTEKDFRDLKTAIAIGCDYLAISFVKSAEDLHMARAKVEEEMKGSNAIRPGL VSKIERVEAIENLDEIIEASDGIMVARGDLAVEVGHAAVPALQKRMIRRARELRRFSITA TQMMESMITNPVPTRAEVSDVANAVLDGTDAVMCSAETAVGAYPFETVTQMATICAVAEN EQDSLNGVDEDTGGVVANINLAIAGGAVSVARAVDAKAIVALTESGSTAFEISRHNIQLP IFALTPSISAQRRMAMYRGVRPMILATSTDHDTALREVESILVDRQILKPGDQYIITSGS QMRQSGSTNMLQVMSVD >gi|289656326|gb|ADEA01000041.1| GENE 79 75441 - 75965 180 174 aa, chain + ## HITS:1 COG:no KEGG:NGK_2387 NR:ns ## KEGG: NGK_2387 # Name: not_defined # Def: membrane protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 1 155 12 166 183 159 52.0 4e-38 MRRFLSSIPIWIVLADMVYGFTLNVTQSLNSRHSAPTSSDGLPLTPDIAFNSLQTLSNGG MILIIGFGLVVLLQLNRTVLKKQILPIGVFRTLGLLAVLAFSIPSLWEWFWALIRLTGGE SVLNFSNIRYLITSICLPLIALTCIFRLFGWSRLHKTLPNEIGNNIEDTEIQRL >gi|289656326|gb|ADEA01000041.1| GENE 80 76057 - 76200 60 47 aa, chain + ## HITS:1 COG:NMA0907 KEGG:ns NR:ns ## COG: NMA0907 COG4105 # Protein_GI_number: 15793873 # Func_class: R General function prediction only # Function: DNA uptake lipoprotein # Organism: Neisseria meningitidis Z2491 # 1 46 221 266 267 79 73.0 1e-15 MELAYKKLGKPQLAADSRRILAGNFPASPYLQKPWRPDDMPWWRYWR >gi|289656326|gb|ADEA01000041.1| GENE 81 76306 - 76476 166 56 aa, chain - ## HITS:1 COG:NMB2017 KEGG:ns NR:ns ## COG: NMB2017 COG1555 # Protein_GI_number: 15677842 # Func_class: L Replication, recombination and repair # Function: DNA uptake protein and related DNA-binding proteins # Organism: Neisseria meningitidis MC58 # 1 55 90 148 148 61 61.0 4e-10 KAKAIVAYRQQNGQFKTVEDLKKVKGIGEGIFSKLKDEASVAPPAAKKAVPAVKQQ Prediction of potential genes in microbial genomes Time: Thu May 26 14:01:25 2011 Seq name: gi|289656325|gb|ADEA01000042.1| Neisseria sp. oral taxon 014 str. F0314 cont1.42, whole genome shotgun sequence Length of sequence - 1598 bp Number of predicted genes - 3, with homology - 1 Number of transcription units - 2, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 2 - 634 888 ## COG1178 ABC-type Fe3+ transport system, permease component 2 1 Op 2 . + CDS 693 - 827 94 ## + Term 934 - 993 3.6 + Prom 1087 - 1146 4.7 3 2 Tu 1 . + CDS 1224 - 1433 135 ## Predicted protein(s) >gi|289656325|gb|ADEA01000042.1| GENE 1 2 - 634 888 210 aa, chain + ## HITS:1 COG:NMB2026 KEGG:ns NR:ns ## COG: NMB2026 COG1178 # Protein_GI_number: 15677851 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+ transport system, permease component # Organism: Neisseria meningitidis MC58 # 1 209 316 524 531 220 74.0 1e-57 ALAAGDSWRVLAEADTLAALWNTLRFSAMAVLLAAALGILHACLVRRAPWVRGLTFLPFM VSPVCVAFGVLLLYPDWTASLPLLIATYALLAYPFVAKDVSAAWDALPPDYADAARSMGA SRFQTALYVTAPLLKPALRRGLTFAAATCAGEFAATLFLSRPEWQTLTTLIYRYLGTAGA DNYARAMVLTAVLMAVALAIFLVLDAEEGR >gi|289656325|gb|ADEA01000042.1| GENE 2 693 - 827 94 44 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSYTTVVAPFLISQCYNSHSLRLYARAVVAPFLISQCYNAGLFV >gi|289656325|gb|ADEA01000042.1| GENE 3 1224 - 1433 135 69 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSGLVVAPFLISQCYNILITTNSPYPVVAPFLISQCYNSIGIKSRATSVVAPFLISQCYN KAISIRKTK Prediction of potential genes in microbial genomes Time: Thu May 26 14:01:34 2011 Seq name: gi|289656324|gb|ADEA01000043.1| Neisseria sp. oral taxon 014 str. F0314 cont1.43, whole genome shotgun sequence Length of sequence - 1644 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 1642 2856 ## COG3209 Rhs family protein Predicted protein(s) >gi|289656324|gb|ADEA01000043.1| GENE 1 1 - 1642 2856 547 aa, chain - ## HITS:1 COG:PA2684 KEGG:ns NR:ns ## COG: PA2684 COG3209 # Protein_GI_number: 15597880 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Pseudomonas aeruginosa # 32 546 267 775 1317 230 35.0 7e-60 FDPASEDGVFRGEDGNLYVNRLGAASLAGREMVRYHYDGRGDLTAVYGRGGKKLRGFAYR NHIMIEHSQPEGLVSRYRYDTYDTGGKVLCNTTNTGEEWTFDYREDHTLVTDVLGRCETF GFDGNYELSYYIDAEGNRSDTERDDDGWITGQTDPLGRETRYGYNRYGQLESTDYPDGSC DEMEYHSELNLPVAYVERMGPPTLCRYDGRGNPIEITDPAGGITRISYGRNGEPESITDP LGKTVRYRYNGAGLPSSYTDCSGGITRFSYTDFGDLESVTDALGQTVRYHYDEAGNHIRT DYPDGGSEHYEYDRLNRLTGYTDPLGNRTVYELAADGLPLKRTDALGHSFGYRYDAARRL AVLTNENGESYRLEYDAADNLIRESGWDGRITEYGYDKAGQLNEQREYGDNPARPLQIHR FERDILGRLTDKISRRTDRNRHTEAYSRSRYDYDPVSGRLSKARNGSGSVELEYDALGRI TGETVVHNGREIKVGYRYDGNGNRIRTELPDGSVVDHLYYGSGHLHRISCNGETVSDIER DALHRET Prediction of potential genes in microbial genomes Time: Thu May 26 14:01:35 2011 Seq name: gi|289656323|gb|ADEA01000044.1| Neisseria sp. oral taxon 014 str. F0314 cont1.44, whole genome shotgun sequence Length of sequence - 1519 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 1263 932 ## gi|298370640|ref|ZP_06981952.1| mucin-associated surface protein Predicted protein(s) >gi|289656323|gb|ADEA01000044.1| GENE 1 3 - 1263 932 420 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298370640|ref|ZP_06981952.1| ## NR: gi|298370640|ref|ZP_06981952.1| mucin-associated surface protein [Neisseria sp. oral taxon 014 str. F0314] # 1 420 86 505 506 568 100.0 1e-160 MQTYSLSDGTLQEGEPVVLTLWGELGSDREAFWPFNSDSWNWLGVMKKVSDGVYRIVTTW KRSKNNPPNDRLLIYCGPNTGKTVSRIDRIKLERGTVATDWTPAPEDGATAASEVAAQLA AHKTAQAEVDKAQTADLTAAKSALAGAVADITSIKTTKADKSEVAALARATLASEWKSAA DAAKTAAIAAAQADAKTKADAARVAAETAAQAKAEAAKTAAVASAAGTAQAKADAAKAAA IADAAAKDAVVKQQAAADAKAKADAALSAAKTYSDGLNREVSAKVDRLSETVTRQDSARA SEINTLTAKLDGMRVGGRNLIRDSAAEVRNANYLMQTYSLSDGTLQEGEPVVLTLWGELG SDREAFWPFNSDSWNWLGVMKKVSDGVYRIVTTWKRSKNNPPNDRLLIYCGPNTGKTVSR Prediction of potential genes in microbial genomes Time: Thu May 26 14:01:57 2011 Seq name: gi|289656322|gb|ADEA01000045.1| Neisseria sp. oral taxon 014 str. F0314 cont1.45, whole genome shotgun sequence Length of sequence - 1097 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 1 - 486 582 ## Patl_2658 hypothetical protein 2 1 Op 2 . + CDS 525 - 1095 588 ## Patl_2658 hypothetical protein Predicted protein(s) >gi|289656322|gb|ADEA01000045.1| GENE 1 1 - 486 582 161 aa, chain + ## HITS:1 COG:no KEGG:Patl_2658 NR:ns ## KEGG: Patl_2658 # Name: not_defined # Def: hypothetical protein # Organism: P.atlantica # Pathway: not_defined # 1 161 610 765 4689 99 56.0 3e-20 GNEGRASDNGSVDTTAAITVEAPDLSNDNTPTLTGTTTDVEEGQLVTLTVTDSRGGSQVV TATVQADGSYQAEVPNALPDGRYSVEAVVSDKAGNRAEARDDNNGKGNVIDTTAPVITVD APDNTSDNTPLISGTTDAPAGSVVSITVTDSRGSVQTVSAT >gi|289656322|gb|ADEA01000045.1| GENE 2 525 - 1095 588 190 aa, chain + ## HITS:1 COG:no KEGG:Patl_2658 NR:ns ## KEGG: Patl_2658 # Name: not_defined # Def: hypothetical protein # Organism: P.atlantica # Pathway: not_defined # 1 189 594 777 4689 124 55.0 2e-27 MAEGRYTAEAAVKDPAGNEGRASDNGSVDTTAAITVEAPDLSNDNTPTLTGTTTDVEEGQ LVTLTVTDSRGGSQVVTATVQADGSYQAEVPNALPDGRYSVEAVVSDKAGNRAEARDDNN GKGNVIDTTAPVITVDAPDNTSDNTPLISGTTDAPAGSVVSITVTDSRGSVQTVSANVGA NGRYSVEVPK Prediction of potential genes in microbial genomes Time: Thu May 26 14:02:04 2011 Seq name: gi|289656321|gb|ADEA01000046.1| Neisseria sp. oral taxon 014 str. F0314 cont1.46, whole genome shotgun sequence Length of sequence - 1032 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 1030 1378 ## Patl_2658 hypothetical protein Predicted protein(s) >gi|289656321|gb|ADEA01000046.1| GENE 1 1 - 1030 1378 343 aa, chain - ## HITS:1 COG:no KEGG:Patl_2658 NR:ns ## KEGG: Patl_2658 # Name: not_defined # Def: hypothetical protein # Organism: P.atlantica # Pathway: not_defined # 1 342 1465 1800 4689 229 53.0 2e-58 ITVEAPDLSNDNTPTLTGTTTDVEEGQLVTLTVTDSRGGSQVVTATVQADGSYQAEVPNA LPDGRYSVEAVVSDKAGNRAEARDDNNGKGNVIDTTAPVITVDAPDNTSDNTPLISGTTD APTGSVVSITVTDSRGSVQTVSANVGANGRYSVEVPKALAEGRYTAEAAVKDPAGNEGKA SDNGSIDITAPVISVDIPEVSRDTTPTISGKTDVPAGTVVTITVTGKDGHPQVVTTTVKD DGSFEVDVPEALPEGPVSVEAVVKDPAGNEGRASDNGTIDTTAPVITVDAPDNTSDNTPL ISGTTDAPAGSIVSITVTDSQGSVQTVSASVGADGRYSVEVPK Prediction of potential genes in microbial genomes Time: Thu May 26 14:02:10 2011 Seq name: gi|289656320|gb|ADEA01000047.1| Neisseria sp. oral taxon 014 str. F0314 cont1.47, whole genome shotgun sequence Length of sequence - 898 bp Number of predicted genes - 2, with homology - 1 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 84 - 125 9.6 1 1 Op 1 . - CDS 126 - 242 80 ## 2 1 Op 2 . - CDS 239 - 883 459 ## XAC3174 hypothetical protein Predicted protein(s) >gi|289656320|gb|ADEA01000047.1| GENE 1 126 - 242 80 38 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSHINKQQQADLAVDACNICVFTVNLSTNSLIHHFRYN >gi|289656320|gb|ADEA01000047.1| GENE 2 239 - 883 459 214 aa, chain - ## HITS:1 COG:no KEGG:XAC3174 NR:ns ## KEGG: XAC3174 # Name: not_defined # Def: hypothetical protein # Organism: X.axonopodis # Pathway: not_defined # 21 214 3 192 192 104 30.0 2e-21 MTALMTAATFSVLSLNACGGSEKSMSIQEQTEARFQLNPHPKQAYRLRIKINDAPGPLKL MGNFGVGYKAENCSYIINRIEGAPASPEKNVETKIRQLGEFEYETVVYVDAMLDEDYFGE GICHWKPDGFGVAFKATGHPEETKFNFGDFLDDLMEKKTLTKYYWKWSYPYSKREDGTLY SDSVDFGIVSPEIYSAEQHKEMFTITVTLEEVQP Prediction of potential genes in microbial genomes Time: Thu May 26 14:02:17 2011 Seq name: gi|289656319|gb|ADEA01000048.1| Neisseria sp. oral taxon 014 str. F0314 cont1.48, whole genome shotgun sequence Length of sequence - 526 bp Number of predicted genes - 2, with homology - 0 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 123 56 ## + Term 137 - 199 4.7 + Prom 146 - 205 3.4 2 2 Tu 1 . + CDS 239 - 382 189 ## + Term 396 - 458 4.7 Predicted protein(s) >gi|289656319|gb|ADEA01000048.1| GENE 1 1 - 123 56 40 aa, chain + ## HITS:0 COG:no KEGG:no NR:no DLEKVSGGGVLATIGAIAGVIAVADAAWSAGKGIVAGWND >gi|289656319|gb|ADEA01000048.1| GENE 2 239 - 382 189 47 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKVMKDFDLEKVSGGGVLATIGAIAGVIAVADAAWSAGKGIVAGWND