Prediction of potential genes in microbial genomes Time: Sun Jul 17 04:27:11 2011 Seq name: gi|333758476|gb|AFIH01000001.1| Oribacterium sp. oral taxon 108 str. F0425 noncontiguous_finished_chromosome, whole genome shotgun sequence Length of sequence - 2518361 bp Number of predicted genes - 2422, with homology - 2226 Number of transcription units - 1075, operones - 584 average op.length - 3.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 494 - 637 74 ## gi|291458681|ref|ZP_06598071.1| conserved hypothetical protein + Term 639 - 674 -0.3 + Prom 701 - 760 3.9 2 2 Tu 1 . + CDS 795 - 1025 176 ## - TRNA 821 - 893 88.0 # Ala TGC 0 0 - 5S_RRNA 943 - 1032 92.0 # CP000885 [D:447851..447967] # 5S ribosomal RNA # Clostridium phytofermentans ISDg # Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium. - SSU_RRNA 1134 - 2611 99.0 # AF481222 [D:1..1478] # 16S ribosomal RNA # Lachnospiraceae oral clone MCE10_236 # Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples. - Term 2746 - 2783 4.1 3 3 Tu 1 . - CDS 3012 - 3563 305 ## Closa_1057 hypothetical protein - Prom 3761 - 3820 9.4 + Prom 3623 - 3682 12.0 4 4 Op 1 . + CDS 3852 - 5519 1109 ## COG3475 LPS biosynthesis protein 5 4 Op 2 . + CDS 5507 - 6574 910 ## COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 6 4 Op 3 . + CDS 6610 - 7929 1035 ## COG0615 Cytidylyltransferase + Prom 7983 - 8042 3.6 7 5 Tu 1 . + CDS 8070 - 8636 561 ## COG0693 Putative intracellular protease/amidase 8 6 Tu 1 . - CDS 8602 - 9792 901 ## COG0628 Predicted permease - Prom 9915 - 9974 4.0 9 7 Op 1 34/0.000 - CDS 10302 - 11084 238 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 10 7 Op 2 31/0.000 - CDS 11180 - 11830 534 ## COG0765 ABC-type amino acid transport system, permease component 11 7 Op 3 . - CDS 11907 - 12725 1025 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Prom 12805 - 12864 4.5 - Term 12834 - 12898 21.2 12 8 Op 1 . - CDS 12941 - 13411 435 ## FMG_0389 hypothetical protein 13 8 Op 2 . - CDS 13422 - 14600 963 ## COG0620 Methionine synthase II (cobalamin-independent) 14 8 Op 3 2/0.038 - CDS 14593 - 15417 927 ## COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component - Term 15479 - 15531 10.0 15 9 Tu 1 . - CDS 15542 - 16666 988 ## COG1960 Acyl-CoA dehydrogenases - Prom 16697 - 16756 7.6 16 10 Op 1 . - CDS 16848 - 17420 541 ## COG1335 Amidases related to nicotinamidase 17 10 Op 2 . - CDS 17486 - 17953 296 ## COG0394 Protein-tyrosine-phosphatase - Prom 18029 - 18088 6.5 18 11 Op 1 . - CDS 18303 - 18641 187 ## gi|325263229|ref|ZP_08129964.1| hypothetical protein HMPREF0240_02224 19 11 Op 2 . - CDS 18699 - 19382 249 ## gi|218135205|ref|ZP_03464009.1| hypothetical protein BACPEC_03110 - Prom 19583 - 19642 4.0 20 12 Op 1 . - CDS 19961 - 20857 471 ## GYMC61_3270 hypothetical protein 21 12 Op 2 . - CDS 20854 - 21441 407 ## GYMC61_3271 hypothetical protein - Prom 21527 - 21586 9.2 - Term 21466 - 21530 14.3 22 13 Op 1 35/0.000 - CDS 21749 - 23509 787 ## COG1132 ABC-type multidrug transport system, ATPase and permease components 23 13 Op 2 . - CDS 23509 - 25212 202 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 24 14 Op 1 34/0.000 - CDS 25316 - 26680 228 ## PROTEIN SUPPORTED gi|225088774|ref|YP_002660041.1| ribosomal protein S16 25 14 Op 2 . - CDS 26768 - 27352 310 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 26 14 Op 3 . - CDS 27353 - 27949 529 ## SEQ_1239 ABC transporter permease protein 27 14 Op 4 . - CDS 27962 - 28708 394 ## COG2207 AraC-type DNA-binding domain-containing proteins 28 14 Op 5 . - CDS 28594 - 28944 190 ## gi|229827212|ref|ZP_04453281.1| hypothetical protein GCWU000182_02598 - Prom 28988 - 29047 6.0 - Term 29097 - 29149 14.1 29 15 Tu 1 . - CDS 29201 - 30334 1215 ## COG1305 Transglutaminase-like enzymes, putative cysteine proteases - Prom 30369 - 30428 5.3 30 16 Op 1 . - CDS 30445 - 30597 168 ## 31 16 Op 2 . - CDS 30614 - 31669 683 ## COG3093 Plasmid maintenance system antidote protein 32 16 Op 3 . - CDS 31699 - 31917 168 ## Acfer_0754 plasmid maintenance system killer 33 16 Op 4 . - CDS 31958 - 32884 577 ## - Prom 32950 - 33009 10.2 + Prom 32884 - 32943 9.7 34 17 Tu 1 . + CDS 33098 - 33988 869 ## gi|227872907|ref|ZP_03991211.1| hypothetical protein HMPREF6123_1150 - Term 33990 - 34044 1.9 35 18 Op 1 . - CDS 34127 - 34573 367 ## Fisuc_2928 nucleic acid binding protein 36 18 Op 2 . - CDS 34577 - 34870 219 ## Fisuc_1834 addiction module antitoxin, RelB/DinJ family - Prom 34904 - 34963 4.0 37 19 Tu 1 . + CDS 35297 - 36292 955 ## COG1396 Predicted transcriptional regulators + Term 36301 - 36331 4.3 - Term 36282 - 36323 8.2 38 20 Tu 1 . - CDS 36487 - 36942 220 ## COG1943 Transposase and inactivated derivatives - Prom 37097 - 37156 12.5 - Term 37101 - 37158 16.0 39 21 Op 1 . - CDS 37254 - 37850 337 ## gi|227873860|ref|ZP_03992082.1| hypothetical protein HMPREF6123_2021 40 21 Op 2 . - CDS 37877 - 38380 621 ## gi|291460640|ref|ZP_06600030.1| conserved hypothetical protein - Prom 38552 - 38611 8.3 + Prom 38498 - 38557 6.0 41 22 Tu 1 . + CDS 38590 - 38883 277 ## COG4496 Uncharacterized protein conserved in bacteria + Term 38975 - 39004 0.5 - Term 38862 - 38893 1.7 42 23 Tu 1 . - CDS 38965 - 40479 1724 ## COG4690 Dipeptidase - Prom 40517 - 40576 8.1 + Prom 40496 - 40555 6.0 43 24 Tu 1 . + CDS 40722 - 42404 1646 ## COG0840 Methyl-accepting chemotaxis protein + Term 42539 - 42579 9.1 - TRNA 42822 - 42892 45.4 # Gly CCC 0 0 44 25 Op 1 . - CDS 42864 - 42971 57 ## 45 25 Op 2 . - CDS 43012 - 43374 441 ## COG1393 Arsenate reductase and related proteins, glutaredoxin family 46 25 Op 3 . - CDS 43427 - 45559 2086 ## COG0840 Methyl-accepting chemotaxis protein - Prom 45620 - 45679 6.0 - Term 45774 - 45822 9.2 47 26 Op 1 . - CDS 45882 - 47252 913 ## gi|227872906|ref|ZP_03991210.1| conserved hypothetical protein 48 26 Op 2 . - CDS 47301 - 50123 1952 ## gi|227872907|ref|ZP_03991211.1| hypothetical protein HMPREF6123_1150 49 26 Op 3 . - CDS 50156 - 50590 283 ## gi|210617175|ref|ZP_03291442.1| hypothetical protein CLONEX_03664 50 26 Op 4 . - CDS 50675 - 52021 897 ## Athe_0718 KWG repeat-containing protein 51 26 Op 5 . - CDS 52055 - 52957 945 ## COG5279 Uncharacterized protein involved in cytokinesis, contains TGc (transglutaminase/protease-like) domain 52 26 Op 6 . - CDS 52975 - 53364 261 ## - Term 53396 - 53431 5.8 53 26 Op 7 . - CDS 53447 - 54211 712 ## Closa_1057 hypothetical protein - Prom 54290 - 54349 12.1 54 27 Tu 1 . - CDS 54397 - 55944 750 ## gi|227872909|ref|ZP_03991213.1| hypothetical protein HMPREF6123_1152 - Prom 55973 - 56032 9.0 - Term 56021 - 56058 5.4 55 28 Op 1 . - CDS 56094 - 57368 1600 ## COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) - Prom 57404 - 57463 1.6 - Term 57386 - 57425 5.7 56 28 Op 2 . - CDS 57465 - 58856 1541 ## COG1362 Aspartyl aminopeptidase - Prom 58940 - 58999 4.4 57 29 Op 1 . - CDS 59042 - 59770 690 ## COG0681 Signal peptidase I 58 29 Op 2 . - CDS 59783 - 60124 373 ## gi|227873132|ref|ZP_03991424.1| hypothetical protein HMPREF6123_1363 59 29 Op 3 . - CDS 60128 - 61045 823 ## COG2267 Lysophospholipase - Prom 61274 - 61333 10.9 + Prom 61079 - 61138 6.2 60 30 Op 1 . + CDS 61344 - 61715 222 ## gi|227873135|ref|ZP_03991427.1| hypothetical protein HMPREF6123_1366 61 30 Op 2 . + CDS 61792 - 62745 1119 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs 62 30 Op 3 . + CDS 62742 - 63662 762 ## COG0561 Predicted hydrolases of the HAD superfamily 63 30 Op 4 . + CDS 63751 - 64020 347 ## COG0325 Predicted enzyme with a TIM-barrel fold 64 30 Op 5 . + CDS 64017 - 64454 385 ## COG0325 Predicted enzyme with a TIM-barrel fold - Term 64318 - 64375 5.6 65 31 Tu 1 . - CDS 64451 - 64996 521 ## COG1418 Predicted HD superfamily hydrolase - Prom 65020 - 65079 6.5 + Prom 65100 - 65159 8.1 66 32 Op 1 . + CDS 65211 - 66710 869 ## COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily 67 32 Op 2 . + CDS 66707 - 66811 75 ## - Term 66844 - 66892 9.1 68 33 Op 1 5/0.019 - CDS 66919 - 68670 1041 ## COG2199 FOG: GGDEF domain 69 33 Op 2 . - CDS 68767 - 70503 1129 ## COG2199 FOG: GGDEF domain 70 34 Op 1 . - CDS 70616 - 72220 872 ## COG1640 4-alpha-glucanotransferase 71 34 Op 2 . - CDS 72278 - 73003 409 ## COG1040 Predicted amidophosphoribosyltransferases 72 34 Op 3 . - CDS 72993 - 75266 1663 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 73 34 Op 4 . - CDS 75340 - 76341 1079 ## COG1077 Actin-like ATPase involved in cell morphogenesis 74 34 Op 5 . - CDS 76357 - 76506 64 ## 75 34 Op 6 . - CDS 76543 - 76947 275 ## Cthe_1620 hypothetical protein 76 34 Op 7 . - CDS 76947 - 77219 228 ## Cthe_1619 AbrB family transcriptional regulator - Prom 77312 - 77371 7.3 - Term 77284 - 77323 8.6 77 35 Op 1 . - CDS 77373 - 77906 305 ## lhv_1697 hypothetical protein 78 35 Op 2 . - CDS 77896 - 78171 214 ## COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system 79 35 Op 3 . - CDS 78168 - 78389 231 ## HS_0447 hypothetical protein - Prom 78475 - 78534 5.5 + Prom 78322 - 78381 5.2 80 36 Tu 1 . + CDS 78513 - 79379 626 ## COG0030 Dimethyladenosine transferase (rRNA methylation) - Term 79132 - 79175 7.2 81 37 Op 1 . - CDS 79368 - 81854 1881 ## Closa_3992 hypothetical protein 82 37 Op 2 . - CDS 81868 - 82380 416 ## Closa_4289 hypothetical protein 83 37 Op 3 25/0.000 - CDS 82381 - 83259 974 ## COG1475 Predicted transcriptional regulators 84 37 Op 4 15/0.000 - CDS 83301 - 84059 842 ## COG1192 ATPases involved in chromosome partitioning - Prom 84097 - 84156 3.0 85 37 Op 5 . - CDS 84163 - 84786 534 ## COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division 86 37 Op 6 . - CDS 84786 - 84911 156 ## - Prom 84982 - 85041 4.3 87 38 Op 1 11/0.000 - CDS 85044 - 86933 1784 ## COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division - Prom 86985 - 87044 2.1 88 38 Op 2 4/0.029 - CDS 87062 - 88429 1246 ## COG0486 Predicted GTPase - Prom 88517 - 88576 5.9 - Term 88494 - 88559 9.1 89 39 Op 1 16/0.000 - CDS 88679 - 89716 777 ## COG1847 Predicted RNA-binding protein 90 39 Op 2 18/0.000 - CDS 89735 - 91051 894 ## COG0706 Preprotein translocase subunit YidC 91 39 Op 3 16/0.000 - CDS 91070 - 91309 99 ## COG0759 Uncharacterized conserved protein - Prom 91343 - 91402 7.3 92 39 Op 4 . - CDS 91421 - 91675 116 ## COG0594 RNase P protein component - Prom 91731 - 91790 2.9 - Term 91775 - 91805 2.7 93 40 Tu 1 . - CDS 91830 - 91973 231 ## PROTEIN SUPPORTED gi|227873167|ref|ZP_03991458.1| ribosomal protein L34 - Prom 92082 - 92141 5.7 + Prom 92332 - 92391 8.3 94 41 Op 1 16/0.000 + CDS 92434 - 93792 1226 ## COG0593 ATPase involved in DNA replication initiation + Prom 93800 - 93859 4.6 95 41 Op 2 . + CDS 93932 - 95056 1033 ## COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) 96 41 Op 3 . + CDS 95053 - 95232 67 ## Closa_0004 DNA replication and repair protein RecF + Term 95258 - 95315 1.9 + Prom 95308 - 95367 3.0 97 42 Op 1 . + CDS 95390 - 95809 173 ## COG1195 Recombinational DNA repair ATPase (RecF pathway) 98 42 Op 2 9/0.000 + CDS 95803 - 96132 245 ## COG1195 Recombinational DNA repair ATPase (RecF pathway) 99 42 Op 3 24/0.000 + CDS 96143 - 98101 2022 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 100 42 Op 4 . + CDS 98112 - 100658 2370 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit + TRNA 100739 - 100826 54.3 # Ser GCT 0 0 + SSU_RRNA 101153 - 102629 99.0 # AF481222 [D:1..1478] # 16S ribosomal RNA # Lachnospiraceae oral clone MCE10_236 # Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples. + TRNA 102851 - 102924 89.9 # Ile GAT 0 0 + 5S_RRNA 102936 - 103045 90.0 # CP000885 [D:447851..447967] # 5S ribosomal RNA # Clostridium phytofermentans ISDg # Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium. + TRNA 103048 - 103120 69.2 # Ala TGC 0 0 + 5S_RRNA 105715 - 105976 96.0 # AF142677 [R:48033..48709] # 5S ribosomal RNA # Bacillus megaterium # Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus. + TRNA 106342 - 106415 86.5 # Asp GTC 0 0 + TRNA 106437 - 106521 56.2 # Tyr GTA 0 0 + TRNA 106542 - 106614 86.7 # Val TAC 0 0 + 5S_RRNA 106548 - 106599 92.0 # AF302131 [D:490..741] # 5S ribosomal RNA # Streptococcus agalactiae # Bacteria; Firmicutes; Lactobacillales; Streptococcaceae; Streptococcus. + TRNA 106627 - 106700 73.9 # Met CAT 0 0 + Prom 106796 - 106855 6.3 101 43 Op 1 . + CDS 106894 - 107976 1124 ## COG0205 6-phosphofructokinase 102 43 Op 2 30/0.000 + CDS 108052 - 109632 1230 ## COG2812 DNA polymerase III, gamma/tau subunits + Prom 109656 - 109715 6.2 103 43 Op 3 23/0.000 + CDS 109754 - 110095 446 ## COG0718 Uncharacterized protein conserved in bacteria 104 43 Op 4 . + CDS 110095 - 110691 600 ## COG0353 Recombinational DNA repair protein (RecF pathway) 105 43 Op 5 . + CDS 110709 - 112541 1980 ## Closa_0177 hypothetical protein + Term 112563 - 112597 4.0 + Prom 112622 - 112681 3.3 106 44 Tu 1 . + CDS 112724 - 113215 339 ## gi|227874526|ref|ZP_03992692.1| conserved hypothetical protein + Term 113217 - 113252 8.1 + Prom 113379 - 113438 10.0 107 45 Op 1 . + CDS 113497 - 114468 664 ## SEQ_0524 membrane protein + Prom 114483 - 114542 3.2 108 45 Op 2 . + CDS 114563 - 115102 561 ## COG1704 Uncharacterized conserved protein + Term 115182 - 115215 6.1 + Prom 115243 - 115302 4.8 109 46 Tu 1 . + CDS 115345 - 116679 1507 ## COG0334 Glutamate dehydrogenase/leucine dehydrogenase + Prom 116730 - 116789 7.1 110 47 Op 1 . + CDS 116920 - 117498 357 ## Closa_4282 hypothetical protein 111 47 Op 2 . + CDS 117528 - 117830 301 ## Closa_4282 hypothetical protein 112 47 Op 3 . + CDS 117834 - 118598 840 ## PROTEIN SUPPORTED gi|227874237|ref|ZP_03992436.1| possible ribosomal protein S4e + Term 118776 - 118814 1.0 - Term 118479 - 118512 1.1 113 48 Op 1 . - CDS 118706 - 119989 509 ## PROTEIN SUPPORTED gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 114 48 Op 2 . - CDS 119976 - 120737 668 ## Closa_4227 integral membrane protein TIGR01906 - Prom 120758 - 120817 4.4 + Prom 120570 - 120629 6.6 115 49 Op 1 . + CDS 120842 - 121192 332 ## Selsp_2135 hypothetical protein 116 49 Op 2 8/0.000 + CDS 121254 - 123128 1665 ## COG4988 ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components 117 49 Op 3 . + CDS 123121 - 124842 213 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 118 49 Op 4 . + CDS 124857 - 125339 441 ## COG2606 Uncharacterized conserved protein + Prom 125370 - 125429 6.4 119 50 Tu 1 . + CDS 125535 - 125765 197 ## gi|227872110|ref|ZP_03990483.1| ECF subfamily RNA polymerase sigma-24 factor - Term 125958 - 125999 4.1 120 51 Tu 1 . - CDS 126085 - 126366 385 ## Ethha_1384 glutaredoxin - Prom 126497 - 126556 2.9 + Prom 126507 - 126566 5.0 121 52 Tu 1 . + CDS 126695 - 129271 2733 ## COG0840 Methyl-accepting chemotaxis protein + Term 129330 - 129377 10.0 + Prom 129342 - 129401 5.8 122 53 Op 1 . + CDS 129468 - 130673 908 ## COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities + Prom 130682 - 130741 4.6 123 53 Op 2 . + CDS 130762 - 131229 226 ## COG0640 Predicted transcriptional regulators 124 53 Op 3 . + CDS 131242 - 131460 306 ## bpr_I1530 heavy metal associated domain-containing protein 125 53 Op 4 . + CDS 131534 - 133480 1988 ## COG2217 Cation transport ATPase + Prom 133494 - 133553 2.1 126 53 Op 5 . + CDS 133589 - 134206 445 ## Closa_2635 hypothetical protein + Term 134214 - 134269 12.1 - Term 134199 - 134260 19.7 127 54 Tu 1 . - CDS 134273 - 135157 766 ## COG0583 Transcriptional regulator - Prom 135217 - 135276 9.0 + Prom 135404 - 135463 7.1 128 55 Tu 1 . + CDS 135528 - 136952 731 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 + Term 136999 - 137050 16.6 129 56 Op 1 . - CDS 136959 - 137150 64 ## 130 56 Op 2 . - CDS 137065 - 137646 290 ## gi|227874205|ref|ZP_03992407.1| hypothetical protein HMPREF6123_2346 131 56 Op 3 . - CDS 137661 - 137903 417 ## Closa_1693 hypothetical protein - Prom 138003 - 138062 3.9 + Prom 137890 - 137949 3.6 132 57 Tu 1 . + CDS 138051 - 138779 669 ## COG0424 Nucleotide-binding protein implicated in inhibition of septum formation + Prom 138790 - 138849 1.8 133 58 Op 1 . + CDS 138897 - 140270 1384 ## COG0733 Na+-dependent transporters of the SNF family 134 58 Op 2 . + CDS 140342 - 141136 194 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 + Term 141191 - 141240 10.7 - Term 141172 - 141232 6.3 135 59 Tu 1 . - CDS 141273 - 141686 446 ## COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism - Prom 141764 - 141823 7.4 + Prom 141685 - 141744 8.2 136 60 Op 1 . + CDS 141787 - 143424 1949 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains 137 60 Op 2 . + CDS 143444 - 143686 223 ## CD3156B hypothetical protein 138 60 Op 3 . + CDS 143683 - 143799 57 ## 139 60 Op 4 . + CDS 143747 - 143983 141 ## HMPREF0424_0696 hypothetical protein 140 60 Op 5 . + CDS 143980 - 144108 119 ## gi|227873072|ref|ZP_03991366.1| conserved hypothetical protein + Term 144116 - 144153 -0.2 - Term 144002 - 144033 -0.1 141 61 Op 1 . - CDS 144212 - 144733 399 ## COG0219 Predicted rRNA methylase (SpoU class) 142 61 Op 2 . - CDS 144739 - 145029 350 ## gi|227873070|ref|ZP_03991364.1| hypothetical protein HMPREF6123_1303 143 61 Op 3 . - CDS 145032 - 145754 187 ## PROTEIN SUPPORTED gi|229845805|ref|ZP_04465917.1| 50S ribosomal protein L31 144 61 Op 4 . - CDS 145852 - 146352 498 ## COG2131 Deoxycytidylate deaminase 145 61 Op 5 . - CDS 146345 - 146491 111 ## 146 62 Tu 1 . + CDS 146856 - 147494 560 ## COG3601 Predicted membrane protein + Term 147495 - 147540 2.4 + Prom 147519 - 147578 5.8 147 63 Op 1 . + CDS 147625 - 149148 1165 ## Closa_2429 polysaccharide deacetylase 148 63 Op 2 . + CDS 149212 - 150408 825 ## COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes - Term 150178 - 150217 2.0 149 64 Tu 1 . - CDS 150405 - 152396 1005 ## COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases 150 65 Op 1 . - CDS 152542 - 154353 1004 ## Thebr_0271 Dextranase (EC:3.2.1.11) 151 65 Op 2 . - CDS 154430 - 155305 493 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 155462 - 155521 13.1 + Prom 155415 - 155474 9.9 152 66 Op 1 35/0.000 + CDS 155506 - 156840 1216 ## COG1653 ABC-type sugar transport system, periplasmic component + Term 156959 - 157002 6.6 + Prom 156858 - 156917 5.0 153 66 Op 2 38/0.000 + CDS 157023 - 157961 854 ## COG1175 ABC-type sugar transport systems, permease components 154 66 Op 3 . + CDS 157973 - 158812 633 ## COG0395 ABC-type sugar transport system, permease component 155 66 Op 4 . + CDS 158892 - 162287 2321 ## COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases + Term 162297 - 162337 3.1 + Prom 162388 - 162447 7.5 156 67 Tu 1 . + CDS 162475 - 165063 1812 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 + Prom 165088 - 165147 9.6 157 68 Tu 1 . + CDS 165187 - 167679 2434 ## Ccur_13730 putative collagen-binding protein + Term 167924 - 167961 1.5 + Prom 167970 - 168029 9.0 158 69 Op 1 . + CDS 168139 - 168696 627 ## Closa_1050 C_GCAxxG_C_C family protein 159 69 Op 2 . + CDS 168712 - 169623 1006 ## COG1275 Tellurite resistance protein and related permeases + Term 169695 - 169733 3.6 - Term 169617 - 169641 -0.3 160 70 Tu 1 . - CDS 169651 - 169806 77 ## + Prom 169779 - 169838 6.8 161 71 Op 1 38/0.000 + CDS 169908 - 170774 692 ## COG1175 ABC-type sugar transport systems, permease components 162 71 Op 2 14/0.000 + CDS 170774 - 171598 348 ## COG0395 ABC-type sugar transport system, permease component + Term 171680 - 171719 -0.0 + Prom 171654 - 171713 7.0 163 71 Op 3 1/0.105 + CDS 171733 - 173046 1218 ## COG1653 ABC-type sugar transport system, periplasmic component 164 71 Op 4 . + CDS 173133 - 173738 199 ## COG1621 Beta-fructosidases (levanase/invertase) 165 71 Op 5 5/0.019 + CDS 173768 - 174526 417 ## COG1621 Beta-fructosidases (levanase/invertase) 166 71 Op 6 . + CDS 174585 - 175586 634 ## COG1609 Transcriptional regulators + Term 175649 - 175701 5.1 - Term 175646 - 175676 2.0 167 72 Tu 1 . - CDS 175689 - 176582 432 ## Closa_1057 hypothetical protein - Prom 176660 - 176719 7.5 + Prom 176714 - 176773 3.3 168 73 Tu 1 . + CDS 176817 - 177203 197 ## PROTEIN SUPPORTED gi|148984704|ref|ZP_01817972.1| 50S ribosomal protein L20 169 74 Op 1 . + CDS 177318 - 178589 1312 ## COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase 170 74 Op 2 . + CDS 178663 - 179526 929 ## gi|227873103|ref|ZP_03991397.1| conserved hypothetical protein + Term 179558 - 179597 7.4 - Term 179545 - 179585 4.6 171 75 Op 1 . - CDS 179669 - 180115 479 ## COG1490 D-Tyr-tRNAtyr deacylase 172 75 Op 2 . - CDS 180126 - 180302 224 ## 173 75 Op 3 . - CDS 180358 - 180924 345 ## Closa_1554 hypothetical protein - Prom 180944 - 181003 2.7 + Prom 181113 - 181172 4.4 174 76 Tu 1 . + CDS 181246 - 183564 2288 ## COG0210 Superfamily I DNA and RNA helicases 175 77 Tu 1 . - CDS 183775 - 184281 333 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Prom 184388 - 184447 4.5 176 78 Tu 1 . + CDS 184579 - 185073 627 ## COG4708 Predicted membrane protein + Prom 185097 - 185156 5.0 177 79 Op 1 . + CDS 185184 - 186596 1296 ## COG0773 UDP-N-acetylmuramate-alanine ligase 178 79 Op 2 . + CDS 186619 - 187506 766 ## COG1284 Uncharacterized conserved protein + Term 187644 - 187672 -0.6 + Prom 187570 - 187629 3.1 179 80 Tu 1 . + CDS 187686 - 188684 654 ## gi|227873097|ref|ZP_03991391.1| hypothetical protein HMPREF6123_1330 + Term 188732 - 188766 4.5 + Prom 188776 - 188835 6.0 180 81 Tu 1 . + CDS 188904 - 190202 1714 ## COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase + Term 190298 - 190331 1.1 181 82 Op 1 . - CDS 190206 - 191390 1041 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase 182 82 Op 2 . - CDS 191415 - 192209 699 ## COG1387 Histidinol phosphatase and related hydrolases of the PHP family 183 82 Op 3 . - CDS 192226 - 192981 705 ## COG0708 Exonuclease III - Prom 193075 - 193134 6.5 + Prom 192935 - 192994 5.5 184 83 Op 1 . + CDS 193235 - 193489 226 ## gi|227874119|ref|ZP_03992325.1| hypothetical protein HMPREF6123_2264 185 83 Op 2 . + CDS 193482 - 194048 572 ## SPAP_1194 signal peptidase-like protein SipA + Term 194138 - 194196 2.1 + Prom 194184 - 194243 8.5 186 84 Op 1 . + CDS 194360 - 194545 252 ## gi|227874116|ref|ZP_03992322.1| hypothetical protein HMPREF6123_2261 + Prom 194581 - 194640 7.6 187 84 Op 2 . + CDS 194665 - 195798 888 ## Closa_4191 SH3 type 3 domain protein + Term 195847 - 195914 16.2 + Prom 195870 - 195929 10.2 188 85 Tu 1 . + CDS 196001 - 196687 776 ## COG0356 F0F1-type ATP synthase, subunit a + Prom 196714 - 196773 5.8 189 86 Op 1 . + CDS 196853 - 197068 328 ## gi|227874110|ref|ZP_03992316.1| F family two-sector ATPase, F(0) subunit C 190 86 Op 2 . + CDS 197105 - 197296 291 ## gi|227874109|ref|ZP_03992315.1| F-ATPase superfamily proton( H+)- or sodium (Na+)-translocating F family ATPase epsilon subunit subunit B 191 86 Op 3 . + CDS 197303 - 197593 372 ## gi|227874109|ref|ZP_03992315.1| F-ATPase superfamily proton( H+)- or sodium (Na+)-translocating F family ATPase epsilon subunit subunit B 192 86 Op 4 42/0.000 + CDS 197600 - 199621 2227 ## COG0056 F0F1-type ATP synthase, alpha subunit 193 86 Op 5 42/0.000 + CDS 199634 - 200539 874 ## COG0224 F0F1-type ATP synthase, gamma subunit 194 86 Op 6 42/0.000 + CDS 200559 - 201950 1495 ## COG0055 F0F1-type ATP synthase, beta subunit 195 86 Op 7 . + CDS 201962 - 202387 470 ## COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) 196 86 Op 8 . + CDS 202398 - 202505 191 ## 197 86 Op 9 . + CDS 202593 - 203303 484 ## Closa_0352 AIR synthase related protein domain protein + Term 203370 - 203407 6.4 + Prom 203388 - 203447 5.6 198 87 Op 1 3/0.029 + CDS 203497 - 203979 568 ## COG1522 Transcriptional regulators 199 87 Op 2 . + CDS 203976 - 205145 1013 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase 200 87 Op 3 4/0.029 + CDS 205162 - 206469 933 ## COG0366 Glycosidases + Prom 206535 - 206594 3.4 201 88 Op 1 . + CDS 206625 - 207065 427 ## COG0296 1,4-alpha-glucan branching enzyme 202 88 Op 2 . + CDS 207047 - 208753 1119 ## COG0296 1,4-alpha-glucan branching enzyme 203 88 Op 3 . + CDS 208692 - 209735 1004 ## COG3759 Predicted membrane protein 204 88 Op 4 . + CDS 209761 - 209871 87 ## 205 88 Op 5 . + CDS 209883 - 211409 1021 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 206 89 Op 1 . + CDS 211568 - 211852 143 ## CD0408A hypothetical protein + Term 211863 - 211923 8.1 207 89 Op 2 . + CDS 211940 - 212716 528 ## SDEG_1349 hypothetical protein 208 89 Op 3 . + CDS 212716 - 213564 547 ## COG1484 DNA replication protein 209 89 Op 4 . + CDS 213561 - 214046 495 ## SEQ_0732 hypothetical protein 210 89 Op 5 . + CDS 214043 - 214381 297 ## CD0412 putative conjugal transfer protein 211 89 Op 6 . + CDS 214432 - 216270 1333 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs + Term 216296 - 216333 2.4 212 90 Tu 1 . + CDS 216351 - 216533 142 ## gi|315650967|ref|ZP_07904006.1| conserved hypothetical protein + Prom 216598 - 216657 4.8 213 91 Tu 1 . + CDS 216703 - 217320 172 ## SmuNN2025_0027 hypothetical protein + Term 217385 - 217419 2.2 + Prom 217322 - 217381 3.4 214 92 Tu 1 . + CDS 217449 - 217769 228 ## SDEG_1343 hypothetical protein + Term 217916 - 217969 9.5 + Prom 217884 - 217943 4.7 215 93 Op 1 1/0.105 + CDS 218013 - 219473 756 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 216 93 Op 2 . + CDS 219480 - 220532 535 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily + Term 220591 - 220638 8.7 + Prom 220624 - 220683 3.4 217 94 Op 1 . + CDS 220784 - 221416 537 ## COG3505 Type IV secretory pathway, VirD4 components 218 94 Op 2 . + CDS 221457 - 223304 776 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs + Term 223364 - 223412 0.1 - Term 223271 - 223328 9.1 219 95 Op 1 . - CDS 223353 - 223556 130 ## ELI_4486 transcriptional regulator - Prom 223576 - 223635 3.5 220 95 Op 2 . - CDS 223640 - 223723 76 ## - Prom 223798 - 223857 10.4 + Prom 223748 - 223807 9.4 221 96 Tu 1 . + CDS 223835 - 224242 160 ## COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit + Term 224342 - 224386 7.3 + Prom 224250 - 224309 4.7 222 97 Op 1 . + CDS 224428 - 224844 363 ## FMG_0975 hypothetical protein + Term 224856 - 224892 4.1 223 97 Op 2 . + CDS 224913 - 225179 158 ## gi|331001941|ref|ZP_08325461.1| hypothetical protein HMPREF0491_00323 + Prom 225290 - 225349 4.0 224 98 Op 1 . + CDS 225493 - 225609 125 ## 225 98 Op 2 . + CDS 225587 - 227221 1209 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 226 98 Op 3 . + CDS 227307 - 227858 299 ## FMG_0972 putative replisome organizer + Prom 228109 - 228168 5.5 227 99 Op 1 . + CDS 228194 - 229309 413 ## PROTEIN SUPPORTED gi|167855185|ref|ZP_02477956.1| 50S ribosomal protein L31 + Term 229342 - 229382 3.4 + Prom 229319 - 229378 2.8 228 99 Op 2 . + CDS 229398 - 229583 119 ## gi|291166216|gb|EFE28262.1| hypothetical protein HMPREF0389_00177 229 100 Op 1 . + CDS 229685 - 230404 571 ## COG3505 Type IV secretory pathway, VirD4 components 230 100 Op 2 . + CDS 230417 - 230836 108 ## 231 100 Op 3 35/0.000 + CDS 230911 - 232704 1022 ## COG1132 ABC-type multidrug transport system, ATPase and permease components 232 100 Op 4 . + CDS 232701 - 234467 223 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 - Term 234996 - 235033 -0.1 233 101 Tu 1 . - CDS 235252 - 235443 169 ## - Prom 235693 - 235752 7.6 - Term 235716 - 235783 17.1 234 102 Op 1 2/0.038 - CDS 235864 - 237129 543 ## COG2217 Cation transport ATPase 235 102 Op 2 1/0.105 - CDS 237171 - 238154 812 ## COG2217 Cation transport ATPase 236 102 Op 3 . - CDS 238174 - 238623 276 ## COG3682 Predicted transcriptional regulator - Prom 238784 - 238843 9.8 237 103 Tu 1 . - CDS 239117 - 239311 165 ## GALLO_0261 replication initiation protein Rep - Prom 239453 - 239512 5.0 238 104 Tu 1 . - CDS 239581 - 240045 340 ## GALLO_0261 replication initiation protein Rep - Prom 240065 - 240124 5.5 239 105 Op 1 . - CDS 240692 - 242134 745 ## COG2132 Putative multicopper oxidases 240 105 Op 2 . - CDS 242152 - 242484 81 ## COG3682 Predicted transcriptional regulator 241 105 Op 3 . - CDS 242448 - 242600 90 ## HMPREF0424_0628 copper transport repressor, CopY/TcrY family - Prom 242644 - 242703 6.8 242 106 Tu 1 . + CDS 243027 - 243410 128 ## CKR_2354 hypothetical protein + Term 243430 - 243465 5.3 - Term 244310 - 244364 4.4 243 107 Tu 1 . - CDS 244534 - 244608 59 ## - Prom 244662 - 244721 5.4 + Prom 244589 - 244648 4.2 244 108 Tu 1 . + CDS 244676 - 245893 472 ## COG0477 Permeases of the major facilitator superfamily + Prom 245898 - 245957 5.7 245 109 Op 1 3/0.029 + CDS 246013 - 246798 599 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains 246 109 Op 2 . + CDS 246774 - 247475 384 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains + Term 247483 - 247535 5.4 - Term 247560 - 247592 -0.0 247 110 Op 1 . - CDS 247593 - 247892 236 ## HMPREF0837_12212 hypothetical protein 248 110 Op 2 . - CDS 247879 - 248247 226 ## HMPREF0837_12211 hypothetical protein - Prom 248346 - 248405 4.0 249 111 Op 1 . - CDS 248592 - 248837 145 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair 250 111 Op 2 . - CDS 248834 - 249022 103 ## HMPREF0837_12208 hypothetical protein - Prom 249130 - 249189 6.1 + Prom 249193 - 249252 2.6 251 112 Tu 1 . + CDS 249272 - 250255 780 ## Lebu_1402 filamentation induced by cAMP protein Fic 252 113 Tu 1 . + CDS 250669 - 252096 737 ## COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen + Prom 252098 - 252157 1.9 253 114 Tu 1 . + CDS 252190 - 252447 255 ## COG3070 Regulator of competence-specific genes + Term 252513 - 252551 -0.4 254 115 Tu 1 . + CDS 253321 - 253893 552 ## COG1309 Transcriptional regulator + Term 253910 - 253944 2.1 + Prom 253910 - 253969 4.8 255 116 Op 1 35/0.000 + CDS 253997 - 255751 1125 ## COG1132 ABC-type multidrug transport system, ATPase and permease components 256 116 Op 2 . + CDS 255733 - 257442 200 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 257 116 Op 3 15/0.000 + CDS 257445 - 258029 179 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 258 116 Op 4 15/0.000 + CDS 258041 - 258601 203 ## COG1122 ABC-type cobalt transport system, ATPase component 259 116 Op 5 . + CDS 258598 - 258960 175 ## COG1122 ABC-type cobalt transport system, ATPase component + Term 259165 - 259202 -1.0 260 117 Tu 1 . - CDS 259204 - 259317 113 ## - Prom 259348 - 259407 7.0 261 118 Op 1 . + CDS 259298 - 259654 132 ## HMPREF0868_0144 cobalt transport protein 262 118 Op 2 . + CDS 259665 - 260249 361 ## HMPREF0868_0145 hypothetical protein + Term 260320 - 260367 1.2 + Prom 260657 - 260716 5.2 263 119 Op 1 . + CDS 260736 - 261329 551 ## EUBREC_3502 hypothetical protein 264 119 Op 2 . + CDS 261326 - 262159 393 ## EUBREC_3503 hypothetical protein + Prom 262184 - 262243 6.8 265 120 Op 1 . + CDS 262347 - 262805 243 ## RPSI07_0258 hypothetical protein + Prom 262814 - 262873 3.1 266 120 Op 2 . + CDS 263104 - 264147 460 ## COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins + Term 264213 - 264273 9.0 + Prom 264384 - 264443 6.6 267 121 Tu 1 . + CDS 264481 - 264972 363 ## SPH_1269 N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC:5.3.1.24) 268 122 Op 1 . + CDS 265494 - 265628 74 ## 269 122 Op 2 . + CDS 265660 - 265959 73 ## gi|227874070|ref|ZP_03992278.1| hypothetical protein HMPREF6123_2217 + Prom 266100 - 266159 3.6 270 123 Op 1 . + CDS 266281 - 266412 61 ## 271 123 Op 2 . + CDS 266384 - 267277 655 ## COG3177 Uncharacterized conserved protein + Term 267330 - 267369 -0.0 + Prom 267299 - 267358 3.1 272 124 Op 1 45/0.000 + CDS 267390 - 268289 359 ## COG1131 ABC-type multidrug transport system, ATPase component 273 124 Op 2 . + CDS 268282 - 269085 509 ## COG0842 ABC-type multidrug transport system, permease component + Prom 269100 - 269159 4.2 274 125 Op 1 . + CDS 269269 - 269562 235 ## COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins 275 125 Op 2 . + CDS 269575 - 269817 249 ## BDP_1367 acetyltransferase (EC:6.3.5.2) + Prom 269824 - 269883 1.7 276 126 Op 1 . + CDS 269960 - 270358 91 ## BT_4222 hypothetical protein 277 126 Op 2 . + CDS 270374 - 272167 1040 ## COG1479 Uncharacterized conserved protein 278 126 Op 3 . + CDS 272196 - 273233 745 ## COG3943 Virulence protein + Term 273375 - 273420 0.5 + Prom 273241 - 273300 5.4 279 127 Op 1 . + CDS 273444 - 275033 802 ## COG1397 ADP-ribosylglycohydrolase 280 127 Op 2 . + CDS 275074 - 276039 554 ## bpr_I1697 hypothetical protein 281 128 Op 1 . + CDS 276229 - 276915 482 ## COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold 282 128 Op 2 . + CDS 276912 - 277268 201 ## PROTEIN SUPPORTED gi|148984704|ref|ZP_01817972.1| 50S ribosomal protein L20 + Term 277382 - 277417 -0.9 - Term 277407 - 277472 7.2 283 129 Op 1 . - CDS 277502 - 279019 1018 ## DSY2713 hypothetical protein 284 129 Op 2 . - CDS 279016 - 279741 250 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein - Prom 279934 - 279993 4.0 + Prom 279692 - 279751 5.5 285 130 Op 1 40/0.000 + CDS 279928 - 280635 436 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 286 130 Op 2 . + CDS 280656 - 281843 849 ## COG0642 Signal transduction histidine kinase + Prom 281856 - 281915 1.5 287 130 Op 3 . + CDS 282025 - 282531 437 ## Olsu_0226 transcriptional regulator, TetR family + Term 282584 - 282627 9.4 + Prom 282533 - 282592 3.9 288 131 Op 1 35/0.000 + CDS 282692 - 284470 1167 ## COG1132 ABC-type multidrug transport system, ATPase and permease components 289 131 Op 2 35/0.000 + CDS 284463 - 285197 308 ## COG1132 ABC-type multidrug transport system, ATPase and permease components 290 131 Op 3 . + CDS 285230 - 286204 242 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Prom 286212 - 286271 2.1 291 132 Op 1 . + CDS 286296 - 286889 368 ## Olsu_0225 hypothetical protein 292 132 Op 2 34/0.000 + CDS 286886 - 287446 89 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters + Prom 287509 - 287568 2.5 293 132 Op 3 . + CDS 287625 - 289115 185 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Prom 289205 - 289264 8.8 294 133 Tu 1 . + CDS 289289 - 291976 2576 ## COG0474 Cation transport ATPase 295 134 Tu 1 . - CDS 291946 - 292197 67 ## - Prom 292364 - 292423 5.0 296 135 Op 1 . + CDS 292127 - 292540 437 ## COG2510 Predicted membrane protein 297 135 Op 2 . + CDS 292554 - 292988 300 ## COG3279 Response regulator of the LytR/AlgR family 298 135 Op 3 . + CDS 292990 - 293424 327 ## gi|227874031|ref|ZP_03992242.1| hypothetical protein HMPREF6123_2181 299 135 Op 4 . + CDS 293490 - 294233 788 ## COG1402 Uncharacterized protein, putative amidase + Prom 294297 - 294356 3.9 300 136 Op 1 . + CDS 294388 - 294495 68 ## 301 136 Op 2 45/0.000 + CDS 294492 - 295403 594 ## COG1131 ABC-type multidrug transport system, ATPase component 302 136 Op 3 . + CDS 295405 - 296325 660 ## COG0842 ABC-type multidrug transport system, permease component + Term 296550 - 296583 -0.9 - Term 296304 - 296349 -0.0 303 137 Tu 1 . - CDS 296385 - 296585 131 ## - Prom 296671 - 296730 3.0 + Prom 296385 - 296444 10.4 304 138 Op 1 . + CDS 296620 - 297024 431 ## gi|291460640|ref|ZP_06600030.1| conserved hypothetical protein 305 138 Op 2 . + CDS 297005 - 297157 122 ## + Prom 297186 - 297245 5.0 306 139 Tu 1 . + CDS 297347 - 297964 653 ## COG1309 Transcriptional regulator + Prom 298053 - 298112 4.5 307 140 Op 1 2/0.038 + CDS 298183 - 298908 650 ## COG1266 Predicted metal-dependent membrane protease 308 140 Op 2 . + CDS 298910 - 300139 631 ## COG0477 Permeases of the major facilitator superfamily 309 140 Op 3 . + CDS 300204 - 300599 335 ## str1624 hypothetical protein 310 140 Op 4 . + CDS 300596 - 301567 635 ## COG1893 Ketopantoate reductase + Term 301710 - 301753 1.3 + Prom 301651 - 301710 7.3 311 141 Tu 1 . + CDS 301786 - 302049 277 ## SGO_1740 integral membrane protein + Term 302066 - 302118 8.0 + Prom 302097 - 302156 5.8 312 142 Tu 1 . + CDS 302270 - 302725 248 ## COG1943 Transposase and inactivated derivatives + Term 302889 - 302946 -0.9 + Prom 302945 - 303004 2.5 313 143 Tu 1 . + CDS 303075 - 303686 439 ## LSL_1338 DNA-binding protein + Prom 303718 - 303777 5.3 314 144 Tu 1 2/0.038 + CDS 303819 - 305132 873 ## COG1373 Predicted ATPase (AAA+ superfamily) + Term 305138 - 305184 7.3 + Prom 305273 - 305332 7.7 315 145 Tu 1 . + CDS 305380 - 306675 901 ## COG1373 Predicted ATPase (AAA+ superfamily) + Term 306899 - 306945 6.4 + Prom 306864 - 306923 5.6 316 146 Tu 1 . + CDS 307100 - 308590 830 ## TDE0537 hypothetical protein 317 147 Tu 1 . - CDS 308791 - 309699 364 ## gi|227874011|ref|ZP_03992224.1| possible transcriptional regulator - Prom 309886 - 309945 7.7 + Prom 309869 - 309928 5.5 318 148 Op 1 . + CDS 310119 - 310238 65 ## 319 148 Op 2 . + CDS 310254 - 311735 1073 ## Ethha_1258 hypothetical protein 320 148 Op 3 . + CDS 311750 - 312844 770 ## COG1690 Uncharacterized conserved protein + Term 312878 - 312925 9.1 - Term 312856 - 312919 7.2 321 149 Tu 1 . - CDS 312962 - 313969 334 ## Sez_0450 hypothetical protein - Prom 313990 - 314049 7.3 + Prom 313937 - 313996 6.2 322 150 Op 1 . + CDS 314154 - 314294 253 ## gi|331001720|ref|ZP_08325242.1| hypothetical protein HMPREF0491_00104 323 150 Op 2 . + CDS 314378 - 314827 442 ## COG2873 O-acetylhomoserine sulfhydrylase + Prom 314933 - 314992 4.9 324 151 Op 1 . + CDS 315048 - 316319 648 ## COG1373 Predicted ATPase (AAA+ superfamily) 325 151 Op 2 . + CDS 316372 - 317256 1009 ## COG2421 Predicted acetamidase/formamidase + Term 317382 - 317414 1.2 326 152 Tu 1 . - CDS 317253 - 317870 401 ## PROTEIN SUPPORTED gi|148988990|ref|ZP_01820390.1| hypothetical protein CGSSp6BS73_02415 - Prom 317903 - 317962 6.1 + Prom 317842 - 317901 8.0 327 153 Op 1 . + CDS 318058 - 318828 523 ## TDE0534 hypothetical protein + Prom 318955 - 319014 4.2 328 153 Op 2 . + CDS 319053 - 320420 462 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 + Term 320520 - 320558 7.2 + Prom 320546 - 320605 4.3 329 154 Tu 1 . + CDS 320627 - 320875 201 ## EUBREC_2876 hypothetical protein + Prom 320877 - 320936 3.1 330 155 Tu 1 . + CDS 320982 - 321431 399 ## DSY1739 hypothetical protein 331 156 Tu 1 . - CDS 321361 - 321864 404 ## gi|227873993|ref|ZP_03992208.1| hypothetical protein HMPREF6123_2147 332 157 Tu 1 . - CDS 321972 - 322607 412 ## Rumal_2015 hypothetical protein - Prom 322754 - 322813 5.0 + Prom 322740 - 322799 7.2 333 158 Op 1 . + CDS 322975 - 323445 366 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Term 323474 - 323513 -0.8 334 158 Op 2 . + CDS 323545 - 324192 327 ## gi|227873991|ref|ZP_03992206.1| hypothetical protein HMPREF6123_2145 + Prom 324207 - 324266 4.1 335 159 Tu 1 . + CDS 324303 - 324863 313 ## Celal_2834 hypothetical protein 336 160 Op 1 . - CDS 324961 - 325440 263 ## TDE2454 hypothetical protein 337 160 Op 2 . - CDS 325465 - 326487 399 ## TDE2454 hypothetical protein + Prom 326742 - 326801 6.6 338 161 Tu 1 . + CDS 326835 - 327431 377 ## COG1309 Transcriptional regulator + Term 327599 - 327637 1.2 + Prom 327650 - 327709 3.9 339 162 Op 1 36/0.000 + CDS 327742 - 328488 292 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 340 162 Op 2 . + CDS 328488 - 330794 508 ## COG0577 ABC-type antimicrobial peptide transport system, permease component + Term 330899 - 330954 16.2 + Prom 331411 - 331470 10.1 341 163 Op 1 9/0.000 + CDS 331524 - 332267 580 ## COG3279 Response regulator of the LytR/AlgR family 342 163 Op 2 . + CDS 332291 - 333598 957 ## COG2972 Predicted signal transduction protein with a C-terminal ATPase domain + Term 333600 - 333632 -0.8 + Prom 333730 - 333789 5.3 343 164 Op 1 . + CDS 333821 - 334489 248 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 344 164 Op 2 . + CDS 334492 - 335208 744 ## SGO_0377 hypothetical protein 345 165 Tu 1 . - CDS 335256 - 336281 472 ## Sez_0450 hypothetical protein - Prom 336342 - 336401 13.0 + Prom 336331 - 336390 4.1 346 166 Tu 1 . + CDS 336441 - 336854 404 ## Vpar_0093 hypothetical protein 347 167 Tu 1 . - CDS 336866 - 337156 156 ## COG3077 DNA-damage-inducible protein J - Prom 337204 - 337263 6.5 + Prom 337156 - 337215 7.4 348 168 Op 1 . + CDS 337340 - 337927 455 ## TDE0520 hypothetical protein 349 168 Op 2 . + CDS 338000 - 338818 480 ## gi|227873978|ref|ZP_03992194.1| conserved hypothetical protein 350 168 Op 3 . + CDS 338837 - 339190 328 ## CLL_A2150 hypothetical protein 351 168 Op 4 . + CDS 339198 - 339749 310 ## TDE0519 hypothetical protein + Prom 339751 - 339810 4.6 352 169 Tu 1 . + CDS 339939 - 341318 1479 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases + Term 341414 - 341455 10.1 - Term 341324 - 341367 0.3 353 170 Op 1 . - CDS 341522 - 341725 223 ## COG1476 Predicted transcriptional regulators 354 170 Op 2 . - CDS 341734 - 341928 198 ## 355 170 Op 3 . - CDS 341892 - 342248 349 ## gi|227873974|ref|ZP_03992190.1| hypothetical protein HMPREF6123_2129 - Prom 342323 - 342382 9.4 + Prom 342300 - 342359 6.9 356 171 Tu 1 . + CDS 342532 - 343308 612 ## COG1145 Ferredoxin - Term 343260 - 343290 -0.3 357 172 Tu 1 . - CDS 343345 - 343446 156 ## gi|227873967|ref|ZP_03992183.1| AAA+ superfamily ATPase - Prom 343608 - 343667 10.2 + Prom 343435 - 343494 4.3 358 173 Tu 1 . + CDS 343635 - 345131 1505 ## COG2317 Zn-dependent carboxypeptidase 359 174 Op 1 . - CDS 345142 - 345561 198 ## Fisuc_2928 nucleic acid binding protein 360 174 Op 2 . - CDS 345568 - 345846 242 ## gi|315650517|ref|ZP_07903584.1| conserved hypothetical protein - Prom 345935 - 345994 8.0 + Prom 345907 - 345966 5.8 361 175 Tu 1 . + CDS 345997 - 346533 467 ## COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases + Prom 346561 - 346620 1.7 362 176 Op 1 . + CDS 346654 - 346773 84 ## 363 176 Op 2 . + CDS 346754 - 347443 515 ## PROTEIN SUPPORTED gi|154175142|ref|YP_001407467.1| 30S ribosomal protein S12 + Prom 347499 - 347558 2.2 364 177 Op 1 . + CDS 347589 - 348248 422 ## COG0500 SAM-dependent methyltransferases 365 177 Op 2 . + CDS 348251 - 348646 335 ## gi|227873959|ref|ZP_03992175.1| hypothetical protein HMPREF6123_2114 366 177 Op 3 . + CDS 348662 - 349081 244 ## TDE1306 hypothetical protein 367 177 Op 4 . + CDS 349111 - 349233 72 ## 368 177 Op 5 . + CDS 349316 - 349513 159 ## EUBELI_20107 hypothetical protein 369 177 Op 6 . + CDS 349541 - 349969 278 ## COG0346 Lactoylglutathione lyase and related lyases 370 177 Op 7 . + CDS 350034 - 350348 208 ## COG3070 Regulator of competence-specific genes + Term 350383 - 350435 3.5 + Prom 350408 - 350467 3.0 371 178 Tu 1 . + CDS 350491 - 351333 361 ## COG3708 Uncharacterized protein conserved in bacteria + Prom 351347 - 351406 3.4 372 179 Tu 1 . + CDS 351440 - 351898 213 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Prom 351938 - 351997 4.1 373 180 Tu 1 . + CDS 352021 - 352398 310 ## CLD_3623 hypothetical protein + Prom 352417 - 352476 5.5 374 181 Op 1 . + CDS 352526 - 352924 124 ## gi|291459730|ref|ZP_06599120.1| conserved hypothetical protein 375 181 Op 2 . + CDS 352926 - 353108 180 ## TDE1306 hypothetical protein 376 181 Op 3 . + CDS 353160 - 353585 212 ## gi|315222598|ref|ZP_07864487.1| hypothetical protein HMPREF0813_01362 + Prom 353589 - 353648 4.3 377 182 Op 1 . + CDS 353852 - 354049 109 ## EUBELI_20107 hypothetical protein 378 182 Op 2 . + CDS 354081 - 354863 181 ## gi|251780850|ref|ZP_04823770.1| hypothetical protein CLO_0918 + Prom 354891 - 354950 7.4 379 183 Tu 1 . + CDS 354983 - 355747 207 ## COG2820 Uridine phosphorylase + Term 355853 - 355896 -0.8 + Prom 355777 - 355836 5.1 380 184 Op 1 . + CDS 356025 - 357401 536 ## bpr_I2658 FAD dependent oxidoreductase 381 184 Op 2 3/0.029 + CDS 357450 - 358832 653 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains 382 184 Op 3 . + CDS 358723 - 358926 63 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains + Term 359055 - 359103 4.5 383 185 Op 1 . + CDS 359271 - 359804 444 ## Rumal_3781 GCN5-related N-acetyltransferase 384 185 Op 2 . + CDS 359881 - 360342 278 ## TDE0517 hypothetical protein 385 185 Op 3 . + CDS 360339 - 360479 140 ## gi|227873936|ref|ZP_03992155.1| conserved hypothetical protein 386 185 Op 4 . + CDS 360531 - 361094 419 ## Fisuc_2783 hypothetical protein 387 185 Op 5 . + CDS 361096 - 361962 493 ## Fisuc_2782 hypothetical protein + Term 361992 - 362028 -0.4 388 185 Op 6 . + CDS 362054 - 363013 262 ## HMPREF0868_1194 AraC family transcriptional regulator + Term 363099 - 363143 9.7 + Prom 363109 - 363168 5.2 389 186 Op 1 . + CDS 363191 - 363418 253 ## FMG_1416 hypothetical protein 390 186 Op 2 . + CDS 363418 - 363768 200 ## FMG_1416 hypothetical protein 391 186 Op 3 . + CDS 363768 - 364448 242 ## FMG_1415 ABC transporter permease 392 186 Op 4 15/0.000 + CDS 364465 - 365082 279 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 393 186 Op 5 . + CDS 365022 - 365909 480 ## COG1122 ABC-type cobalt transport system, ATPase component 394 186 Op 6 35/0.000 + CDS 365941 - 367668 225 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 395 186 Op 7 . + CDS 367652 - 369388 1396 ## COG1132 ABC-type multidrug transport system, ATPase and permease components 396 186 Op 8 . + CDS 369408 - 369518 164 ## + Prom 369526 - 369585 2.2 397 187 Tu 1 . + CDS 369624 - 370370 316 ## COG1893 Ketopantoate reductase + Prom 370448 - 370507 4.6 398 188 Op 1 . + CDS 370555 - 370749 91 ## CLI_1025 hypothetical protein + Prom 370751 - 370810 2.4 399 188 Op 2 . + CDS 370844 - 371464 556 ## SmuNN2025_0027 hypothetical protein 400 188 Op 3 . + CDS 371526 - 372263 198 ## COG1266 Predicted metal-dependent membrane protease 401 188 Op 4 . + CDS 372294 - 372521 258 ## TDE0510 hypothetical protein + Term 372538 - 372569 -0.7 402 188 Op 5 . + CDS 372588 - 372758 123 ## TDE0510 hypothetical protein 403 188 Op 6 . + CDS 372745 - 373557 646 ## Acfer_1144 hypothetical protein 404 188 Op 7 . + CDS 373608 - 374018 268 ## Fjoh_0899 hypothetical protein + Prom 374026 - 374085 1.8 405 189 Op 1 . + CDS 374135 - 374899 334 ## SmuNN2025_0272 CAAX amino terminal protease family protein 406 189 Op 2 . + CDS 374988 - 376022 851 ## COG4804 Uncharacterized conserved protein - Term 375938 - 375969 -0.8 407 190 Op 1 . - CDS 376024 - 376350 179 ## EUBREC_2368 hypothetical protein 408 190 Op 2 . - CDS 376343 - 376693 327 ## COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system - Prom 376734 - 376793 8.2 + Prom 376662 - 376721 6.4 409 191 Tu 1 . + CDS 376904 - 376987 69 ## + Prom 377065 - 377124 7.1 410 192 Tu 1 . + CDS 377247 - 377579 283 ## gi|227873926|ref|ZP_03992146.1| conserved hypothetical protein + Prom 377611 - 377670 6.0 411 193 Op 1 . + CDS 377690 - 378073 404 ## EUBELI_00410 hypothetical protein 412 193 Op 2 . + CDS 378090 - 378635 475 ## COG3797 Uncharacterized protein conserved in bacteria - Term 378410 - 378448 3.8 413 194 Tu 1 . - CDS 378563 - 378799 60 ## - Prom 378951 - 379010 6.1 + Prom 378853 - 378912 5.5 414 195 Op 1 . + CDS 378975 - 379190 191 ## Fisuc_1292 hypothetical protein 415 195 Op 2 . + CDS 379187 - 379669 465 ## Fisuc_1291 hypothetical protein 416 195 Op 3 . + CDS 379666 - 379881 338 ## gi|227873895|ref|ZP_03992116.1| hypothetical protein HMPREF6123_2055 417 196 Op 1 . + CDS 380014 - 380157 98 ## 418 196 Op 2 . + CDS 380135 - 380740 403 ## TepRe1_1844 hypothetical protein 419 196 Op 3 . + CDS 380733 - 381635 472 ## GK3178 hypothetical protein + Term 381687 - 381724 0.7 420 197 Tu 1 . - CDS 381710 - 381973 128 ## COG1733 Predicted transcriptional regulators + Prom 381717 - 381776 3.4 421 198 Tu 1 . + CDS 381926 - 382036 67 ## + Prom 382154 - 382213 3.3 422 199 Tu 1 . + CDS 382300 - 382815 581 ## COG0778 Nitroreductase + Term 382915 - 382963 11.0 + Prom 382927 - 382986 5.6 423 200 Tu 1 . + CDS 383013 - 384245 965 ## COG1373 Predicted ATPase (AAA+ superfamily) 424 201 Op 1 35/0.000 - CDS 384358 - 386067 217 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 425 201 Op 2 . - CDS 386064 - 387821 1105 ## COG1132 ABC-type multidrug transport system, ATPase and permease components 426 201 Op 3 34/0.000 - CDS 387814 - 389337 713 ## COG1122 ABC-type cobalt transport system, ATPase component 427 201 Op 4 . - CDS 389341 - 390069 231 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 428 201 Op 5 . - CDS 390066 - 390677 493 ## HMPREF0868_1192 hypothetical protein - Prom 390757 - 390816 8.3 + Prom 390683 - 390742 3.6 429 202 Tu 1 . + CDS 390862 - 391824 467 ## COG2207 AraC-type DNA-binding domain-containing proteins + Prom 391830 - 391889 6.8 430 203 Op 1 . + CDS 391918 - 392640 517 ## gi|227873921|ref|ZP_03992141.1| conserved hypothetical protein 431 203 Op 2 . + CDS 392704 - 393669 651 ## COG0701 Predicted permeases 432 203 Op 3 . + CDS 393696 - 394043 250 ## FMG_0982 putative plasmid transfer factor + Prom 394262 - 394321 8.0 433 204 Op 1 . + CDS 394355 - 394996 336 ## TDE1601 TetR family transcriptional regulator 434 204 Op 2 35/0.000 + CDS 395055 - 396806 219 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 435 204 Op 3 . + CDS 396807 - 398531 229 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 436 204 Op 4 34/0.000 + CDS 398519 - 400048 195 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 + Term 400135 - 400188 5.2 + Prom 400108 - 400167 4.5 437 205 Op 1 . + CDS 400249 - 400746 5 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 438 205 Op 2 . + CDS 400764 - 400982 137 ## TDE1596 hypothetical protein + Prom 401037 - 401096 3.7 439 206 Tu 1 . + CDS 401130 - 401585 220 ## COG1943 Transposase and inactivated derivatives + Term 401750 - 401791 8.2 + Prom 401776 - 401835 5.0 440 207 Op 1 . + CDS 401857 - 402156 174 ## TDE1596 hypothetical protein 441 207 Op 2 . + CDS 402195 - 402263 59 ## - Term 402442 - 402472 4.3 442 208 Tu 1 . - CDS 402553 - 403485 764 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components + Prom 403302 - 403361 3.8 443 209 Tu 1 . + CDS 403445 - 403558 107 ## - Term 403500 - 403545 1.1 444 210 Op 1 42/0.000 - CDS 403595 - 404482 384 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 445 210 Op 2 25/0.000 - CDS 404475 - 405191 243 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 446 210 Op 3 . - CDS 405206 - 406144 537 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin + Prom 406115 - 406174 8.7 447 211 Op 1 . + CDS 406405 - 406659 86 ## TDE1596 hypothetical protein 448 211 Op 2 . + CDS 406685 - 406984 161 ## TDE1596 hypothetical protein - Term 407146 - 407181 1.0 449 212 Tu 1 . - CDS 407186 - 407380 216 ## Elen_0480 transposase IS116/IS110/IS902 family protein - Prom 407630 - 407689 6.8 + Prom 407552 - 407611 3.0 450 213 Op 1 . + CDS 407654 - 408583 885 ## COG0523 Putative GTPases (G3E family) 451 213 Op 2 . + CDS 408616 - 408846 302 ## COG0526 Thiol-disulfide isomerase and thioredoxins 452 213 Op 3 . + CDS 408863 - 409900 1030 ## COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF + Term 410043 - 410089 -0.9 453 214 Tu 1 . - CDS 409962 - 410168 204 ## CD1100 putative conjugative transposon protein - Prom 410245 - 410304 7.4 - Term 410262 - 410313 4.1 454 215 Tu 1 . - CDS 410331 - 410675 183 ## COG1733 Predicted transcriptional regulators + Prom 410716 - 410775 6.4 455 216 Op 1 2/0.038 + CDS 410795 - 411019 132 ## COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold 456 216 Op 2 . + CDS 411079 - 411603 322 ## COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold + Term 411698 - 411732 4.3 + Prom 411972 - 412031 8.2 457 217 Tu 1 . + CDS 412157 - 412606 635 ## COG0071 Molecular chaperone (small heat shock protein) + Term 412660 - 412697 6.2 458 218 Tu 1 . - CDS 412771 - 413652 729 ## CPR_0879 CAAX amino terminal protease family protein - Prom 413715 - 413774 6.5 + Prom 413663 - 413722 6.2 459 219 Tu 1 . + CDS 413886 - 414437 469 ## COG3760 Uncharacterized conserved protein + Term 414556 - 414585 -0.4 + Prom 414530 - 414589 4.2 460 220 Op 1 . + CDS 414667 - 414816 263 ## PROTEIN SUPPORTED gi|227873029|ref|ZP_03991324.1| ribosomal protein L33 461 220 Op 2 . + CDS 414816 - 415016 274 ## gi|227873028|ref|ZP_03991323.1| hypothetical protein HMPREF6123_1262 462 220 Op 3 45/0.000 + CDS 415027 - 415557 688 ## COG0250 Transcription antiterminator 463 220 Op 4 55/0.000 + CDS 415666 - 416091 682 ## PROTEIN SUPPORTED gi|227873026|ref|ZP_03991321.1| ribosomal protein L11 464 220 Op 5 . + CDS 416112 - 416804 1117 ## PROTEIN SUPPORTED gi|227873025|ref|ZP_03991320.1| ribosomal protein L1 + Term 416818 - 416858 9.0 + Prom 416958 - 417017 8.5 465 221 Tu 1 . + CDS 417100 - 419196 1869 ## GYMC10_2394 APHP domain protein + Prom 419297 - 419356 6.0 466 222 Tu 1 . + CDS 419410 - 419670 375 ## SSA_0394 hypothetical protein 467 223 Op 1 47/0.000 + CDS 420039 - 420536 602 ## PROTEIN SUPPORTED gi|239623242|ref|ZP_04666273.1| ribosomal protein L10 468 223 Op 2 . + CDS 420586 - 420984 623 ## PROTEIN SUPPORTED gi|227873018|ref|ZP_03991313.1| ribosomal protein L7/L12 + Term 421000 - 421045 11.4 - Term 421568 - 421610 9.1 469 224 Tu 1 . - CDS 421612 - 421749 73 ## - Prom 421814 - 421873 4.9 + Prom 421845 - 421904 5.5 470 225 Op 1 . + CDS 422021 - 422314 377 ## EUBELI_00577 hypothetical protein 471 225 Op 2 . + CDS 422349 - 424505 1816 ## COG2217 Cation transport ATPase 472 225 Op 3 . + CDS 424549 - 424947 476 ## COG1321 Mn-dependent transcriptional regulator + Term 424983 - 425035 16.2 + Prom 425020 - 425079 10.3 473 226 Op 1 . + CDS 425164 - 425373 295 ## Rumal_1322 FeoA family protein 474 226 Op 2 22/0.000 + CDS 425412 - 425639 352 ## COG1918 Fe2+ transport system protein A 475 226 Op 3 . + CDS 425650 - 427863 2427 ## COG0370 Fe2+ transport system protein B + Term 427926 - 427977 15.5 + Prom 427971 - 428030 8.8 476 227 Op 1 . + CDS 428071 - 428298 223 ## gi|227873007|ref|ZP_03991303.1| hypothetical protein HMPREF6123_1242 477 227 Op 2 . + CDS 428363 - 429238 729 ## COG2017 Galactose mutarotase and related enzymes - Term 428994 - 429031 3.2 478 228 Tu 1 . - CDS 429235 - 430530 1095 ## COG0534 Na+-driven multidrug efflux pump - Prom 430613 - 430672 4.0 + Prom 430523 - 430582 6.6 479 229 Op 1 . + CDS 430685 - 432064 1071 ## COG0534 Na+-driven multidrug efflux pump 480 229 Op 2 . + CDS 432075 - 433292 758 ## BP951000_0356 major facilitator superfamily protein 481 229 Op 3 . + CDS 433320 - 434171 759 ## COG1284 Uncharacterized conserved protein + Prom 434209 - 434268 6.0 482 230 Tu 1 . + CDS 434394 - 435455 1345 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases + Prom 435738 - 435797 5.6 483 231 Tu 1 . + CDS 435835 - 437049 1329 ## COG1454 Alcohol dehydrogenase, class IV + Term 437166 - 437217 1.8 + Prom 437176 - 437235 6.6 484 232 Op 1 . + CDS 437301 - 438710 1693 ## HMPREF0868_0284 putative lipoprotein 485 232 Op 2 8/0.000 + CDS 438743 - 440566 1838 ## COG1178 ABC-type Fe3+ transport system, permease component 486 232 Op 3 2/0.038 + CDS 440568 - 442184 1713 ## COG3839 ABC-type sugar transport systems, ATPase components + Term 442352 - 442390 6.2 + Prom 442402 - 442461 2.9 487 233 Op 1 1/0.105 + CDS 442532 - 443503 885 ## COG1840 ABC-type Fe3+ transport system, periplasmic component 488 233 Op 2 7/0.000 + CDS 443500 - 445254 1194 ## COG2972 Predicted signal transduction protein with a C-terminal ATPase domain 489 233 Op 3 . + CDS 445256 - 446002 597 ## COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain + Prom 446004 - 446063 3.2 490 234 Op 1 30/0.000 + CDS 446106 - 447188 1063 ## COG3842 ABC-type spermidine/putrescine transport systems, ATPase components 491 234 Op 2 36/0.000 + CDS 447178 - 447996 874 ## COG1176 ABC-type spermidine/putrescine transport system, permease component I 492 234 Op 3 . + CDS 447996 - 448793 615 ## COG1177 ABC-type spermidine/putrescine transport system, permease component II + Prom 448827 - 448886 1.8 493 235 Op 1 . + CDS 448985 - 449170 137 ## 494 235 Op 2 . + CDS 449198 - 450376 1392 ## COG0687 Spermidine/putrescine-binding periplasmic protein + Prom 450382 - 450441 4.0 495 236 Op 1 . + CDS 450621 - 450869 327 ## COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit 496 236 Op 2 . + CDS 450964 - 452688 1239 ## gi|227873795|ref|ZP_03992022.1| hypothetical protein HMPREF6123_1961 + Prom 452729 - 452788 4.3 497 237 Op 1 . + CDS 452828 - 453898 1041 ## COG2706 3-carboxymuconate cyclase 498 237 Op 2 . + CDS 453963 - 455048 920 ## COG0082 Chorismate synthase 499 237 Op 3 . + CDS 455071 - 456078 844 ## COG3938 Proline racemase + Term 456138 - 456181 5.4 500 238 Tu 1 . - CDS 456417 - 456482 56 ## - Prom 456619 - 456678 2.7 + Prom 456414 - 456473 5.7 501 239 Op 1 . + CDS 456579 - 456926 104 ## gi|227872882|ref|ZP_03991187.1| conserved hypothetical protein 502 239 Op 2 . + CDS 456913 - 457578 397 ## Closa_3793 hypothetical protein + Term 457646 - 457674 -0.2 + Prom 457588 - 457647 2.4 503 240 Op 1 . + CDS 457728 - 458372 542 ## Closa_3793 hypothetical protein 504 240 Op 2 . + CDS 458438 - 459469 65 ## Closa_3795 hypothetical protein 505 240 Op 3 . + CDS 459490 - 460260 547 ## Closa_3795 hypothetical protein 506 240 Op 4 . + CDS 460253 - 461737 898 ## Closa_3794 hypothetical protein + Term 461742 - 461780 5.6 + TRNA 461885 - 461956 54.7 # Arg CCT 0 0 + Prom 461886 - 461945 78.1 507 241 Op 1 . + CDS 462116 - 462547 259 ## COG1846 Transcriptional regulators 508 241 Op 2 . + CDS 462544 - 462927 301 ## EUBREC_3491 hypothetical protein + Term 462937 - 462967 1.0 + Prom 463051 - 463110 5.2 509 242 Op 1 . + CDS 463266 - 463670 311 ## Lebu_1625 hypothetical protein 510 242 Op 2 . + CDS 463654 - 464022 166 ## Lebu_1626 hypothetical protein + Term 464049 - 464092 -0.4 511 243 Op 1 . + CDS 464130 - 464585 516 ## COG1225 Peroxiredoxin 512 243 Op 2 . + CDS 464587 - 465336 516 ## COG3022 Uncharacterized protein conserved in bacteria + Term 465476 - 465525 4.5 513 244 Op 1 . - CDS 465347 - 465691 329 ## gi|323142183|ref|ZP_08077018.1| divergent AAA domain protein 514 244 Op 2 . - CDS 465592 - 466149 91 ## COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen 515 244 Op 3 . - CDS 466146 - 466313 127 ## gi|225377009|ref|ZP_03754230.1| hypothetical protein ROSEINA2194_02653 - Prom 466478 - 466537 2.9 + Prom 466248 - 466307 5.8 516 245 Op 1 7/0.000 + CDS 466361 - 466933 391 ## COG2059 Chromate transport protein ChrA 517 245 Op 2 . + CDS 466930 - 467484 280 ## COG2059 Chromate transport protein ChrA + Prom 467488 - 467547 3.3 518 246 Op 1 . + CDS 467602 - 468963 1039 ## COG2211 Na+/melibiose symporter and related transporters 519 246 Op 2 . + CDS 468965 - 469027 62 ## + Prom 469029 - 469088 4.6 520 247 Op 1 . + CDS 469175 - 471079 1268 ## COG3250 Beta-galactosidase/beta-glucuronidase 521 247 Op 2 . + CDS 471063 - 472016 447 ## COG3250 Beta-galactosidase/beta-glucuronidase + Term 472093 - 472148 12.4 - Term 472095 - 472121 -1.0 522 248 Op 1 . - CDS 472124 - 472297 98 ## gi|227874259|ref|ZP_03992456.1| transposase 523 248 Op 2 . - CDS 472272 - 472625 136 ## TepRe1_1316 transposase IS4 family protein - Prom 472688 - 472747 6.4 + Prom 472902 - 472961 4.9 524 249 Tu 1 . + CDS 472985 - 473257 280 ## COG0395 ABC-type sugar transport system, permease component + Term 473429 - 473470 -0.9 + Prom 473335 - 473394 4.7 525 250 Op 1 . + CDS 473571 - 475367 1156 ## COG5263 FOG: Glucan-binding domain (YG repeat) 526 250 Op 2 . + CDS 475394 - 476119 514 ## COG0846 NAD-dependent protein deacetylases, SIR2 family + Term 476143 - 476194 4.1 - Term 476124 - 476190 19.4 527 251 Tu 1 . - CDS 476262 - 478469 2176 ## COG0840 Methyl-accepting chemotaxis protein - Prom 478515 - 478574 1.9 528 252 Tu 1 . + CDS 478384 - 478593 72 ## 529 253 Tu 1 . - CDS 478588 - 478740 96 ## - Prom 478801 - 478860 5.1 + Prom 478696 - 478755 3.1 530 254 Op 1 . + CDS 478861 - 480249 1042 ## COG1114 Branched-chain amino acid permeases + Term 480250 - 480288 1.0 531 254 Op 2 5/0.019 + CDS 480318 - 481088 879 ## COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 532 254 Op 3 . + CDS 481090 - 482232 1007 ## COG0451 Nucleoside-diphosphate-sugar epimerases 533 255 Op 1 1/0.105 + CDS 482353 - 483219 590 ## COG3475 LPS biosynthesis protein 534 255 Op 2 . + CDS 483216 - 484199 435 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 535 255 Op 3 . + CDS 484263 - 485267 842 ## COG2605 Predicted kinase related to galactokinase and mevalonate kinase 536 255 Op 4 . + CDS 485273 - 485698 289 ## gi|227872230|ref|ZP_03990591.1| hypothetical protein HMPREF6123_0530 + Term 485705 - 485753 -0.6 + Prom 485901 - 485960 5.7 537 256 Op 1 . + CDS 485987 - 486187 129 ## 538 256 Op 2 . + CDS 486215 - 486475 105 ## + Term 486499 - 486528 -0.1 + Prom 486517 - 486576 4.2 539 257 Tu 1 . + CDS 486698 - 488587 1628 ## COG5263 FOG: Glucan-binding domain (YG repeat) + Term 488729 - 488767 8.6 + Prom 488600 - 488659 6.3 540 258 Op 1 . + CDS 488862 - 490355 1700 ## Rumal_0322 hypothetical protein 541 258 Op 2 . + CDS 490352 - 491572 804 ## COG2717 Predicted membrane protein + Term 491674 - 491708 3.2 + Prom 491595 - 491654 3.9 542 259 Op 1 . + CDS 491881 - 492684 744 ## Apar_0265 hypothetical protein 543 259 Op 2 . + CDS 492700 - 494052 1181 ## COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis + Term 494108 - 494154 6.1 - Term 494095 - 494141 6.1 544 260 Op 1 . - CDS 494221 - 494991 578 ## Cphy_1940 SCP-like extracellular 545 260 Op 2 . - CDS 495091 - 495825 604 ## COG5263 FOG: Glucan-binding domain (YG repeat) - Prom 496060 - 496119 4.7 + Prom 495974 - 496033 4.9 546 261 Op 1 . + CDS 496100 - 497188 1016 ## COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis 547 261 Op 2 . + CDS 497212 - 497328 120 ## 548 261 Op 3 . + CDS 497325 - 497450 129 ## + Term 497452 - 497485 2.2 + Prom 497641 - 497700 4.8 549 262 Op 1 40/0.000 + CDS 497938 - 498255 525 ## PROTEIN SUPPORTED gi|227871805|ref|ZP_03990208.1| ribosomal protein S10 550 262 Op 2 58/0.000 + CDS 498300 - 498929 828 ## PROTEIN SUPPORTED gi|238916265|ref|YP_002929782.1| large subunit ribosomal protein L3 551 262 Op 3 61/0.000 + CDS 498955 - 499575 978 ## PROTEIN SUPPORTED gi|227871801|ref|ZP_03990205.1| ribosomal protein L4 552 262 Op 4 61/0.000 + CDS 499575 - 499874 440 ## PROTEIN SUPPORTED gi|227871800|ref|ZP_03990204.1| ribosomal protein L23 553 262 Op 5 60/0.000 + CDS 499941 - 500786 1415 ## PROTEIN SUPPORTED gi|227871799|ref|ZP_03990203.1| ribosomal protein L2 554 262 Op 6 59/0.000 + CDS 500806 - 501084 486 ## PROTEIN SUPPORTED gi|227871798|ref|ZP_03990202.1| ribosomal protein S19 555 262 Op 7 61/0.000 + CDS 501114 - 501503 629 ## PROTEIN SUPPORTED gi|227871797|ref|ZP_03990201.1| ribosomal protein L22 556 262 Op 8 50/0.000 + CDS 501517 - 502179 1083 ## PROTEIN SUPPORTED gi|227871796|ref|ZP_03990200.1| ribosomal protein S3 557 262 Op 9 . + CDS 502182 - 502610 732 ## PROTEIN SUPPORTED gi|227871795|ref|ZP_03990199.1| ribosomal protein L16 558 262 Op 10 . + CDS 502610 - 502813 317 ## PROTEIN SUPPORTED gi|227871794|ref|ZP_03990198.1| ribosomal protein L29 559 262 Op 11 50/0.000 + CDS 502831 - 503085 414 ## PROTEIN SUPPORTED gi|227871793|ref|ZP_03990197.1| ribosomal protein S17 560 262 Op 12 57/0.000 + CDS 503110 - 503478 596 ## PROTEIN SUPPORTED gi|227871792|ref|ZP_03990196.1| ribosomal protein L14 561 262 Op 13 48/0.000 + CDS 503492 - 503797 478 ## PROTEIN SUPPORTED gi|227871791|ref|ZP_03990195.1| ribosomal protein L24 562 262 Op 14 50/0.000 + CDS 503817 - 504356 899 ## PROTEIN SUPPORTED gi|227871790|ref|ZP_03990194.1| ribosomal protein L5 563 262 Op 15 50/0.000 + CDS 504369 - 504554 330 ## PROTEIN SUPPORTED gi|227871789|ref|ZP_03990193.1| ribosomal protein S14 + Term 504569 - 504610 2.7 + Prom 504566 - 504625 1.8 564 262 Op 16 55/0.000 + CDS 504665 - 505066 530 ## PROTEIN SUPPORTED gi|238916279|ref|YP_002929796.1| small subunit ribosomal protein S8 565 262 Op 17 46/0.000 + CDS 505128 - 505667 897 ## PROTEIN SUPPORTED gi|227871786|ref|ZP_03990191.1| ribosomal protein L6 566 262 Op 18 56/0.000 + CDS 505683 - 506045 584 ## PROTEIN SUPPORTED gi|227871785|ref|ZP_03990190.1| ribosomal protein L18 567 262 Op 19 . + CDS 506067 - 506576 835 ## PROTEIN SUPPORTED gi|227871784|ref|ZP_03990189.1| ribosomal protein S5 568 262 Op 20 . + CDS 506589 - 506771 282 ## PROTEIN SUPPORTED gi|227871783|ref|ZP_03990188.1| ribosomal protein L30 569 262 Op 21 53/0.000 + CDS 506783 - 507226 730 ## PROTEIN SUPPORTED gi|227871782|ref|ZP_03990187.1| ribosomal protein L15 570 262 Op 22 28/0.000 + CDS 507226 - 508566 778 ## PROTEIN SUPPORTED gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 + Prom 508575 - 508634 1.5 571 262 Op 23 12/0.000 + CDS 508657 - 509307 652 ## COG0563 Adenylate kinase and related kinases 572 262 Op 24 9/0.000 + CDS 509326 - 510081 650 ## COG0024 Methionine aminopeptidase 573 262 Op 25 . + CDS 510089 - 510307 270 ## PROTEIN SUPPORTED gi|15900168|ref|NP_344772.1| translation initiation factor IF-1 + Prom 510315 - 510374 4.5 574 263 Op 1 . + CDS 510394 - 510507 191 ## PROTEIN SUPPORTED gi|160881761|ref|YP_001560729.1| ribosomal protein L36 575 263 Op 2 48/0.000 + CDS 510527 - 510895 591 ## PROTEIN SUPPORTED gi|227871777|ref|ZP_03990182.1| ribosomal protein S13 576 263 Op 3 36/0.000 + CDS 510975 - 511370 658 ## PROTEIN SUPPORTED gi|227871776|ref|ZP_03990181.1| ribosomal protein S11 + Prom 511471 - 511530 2.2 577 263 Op 4 26/0.000 + CDS 511576 - 512169 938 ## PROTEIN SUPPORTED gi|227871775|ref|ZP_03990180.1| ribosomal protein S4 578 263 Op 5 50/0.000 + CDS 512194 - 513138 1004 ## COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit 579 263 Op 6 . + CDS 513197 - 513733 760 ## PROTEIN SUPPORTED gi|227871773|ref|ZP_03990178.1| possible ribosomal protein L17 + Term 513782 - 513839 9.8 + Prom 513853 - 513912 8.1 580 264 Op 1 . + CDS 513933 - 515213 1232 ## COG5263 FOG: Glucan-binding domain (YG repeat) 581 264 Op 2 . + CDS 515268 - 516014 741 ## gi|227873645|ref|ZP_03991882.1| conserved hypothetical protein + Prom 516072 - 516131 7.5 582 265 Tu 1 . + CDS 516169 - 516399 181 ## + Term 516492 - 516521 2.1 - Term 516069 - 516106 -0.8 583 266 Op 1 . - CDS 516351 - 516611 105 ## 584 266 Op 2 . - CDS 516532 - 516702 205 ## TTE0932 ferredoxin 3 - Prom 516758 - 516817 7.4 585 267 Tu 1 . + CDS 516855 - 518585 1709 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains + Term 518816 - 518853 7.1 586 268 Tu 1 . - CDS 518781 - 520943 194 ## PROTEIN SUPPORTED gi|237669903|ref|ZP_04529877.1| SSU ribosomal protein S1P - Prom 521125 - 521184 7.7 + Prom 521103 - 521162 7.0 587 269 Tu 1 . + CDS 521209 - 522117 445 ## gi|227873752|ref|ZP_03991982.1| hypothetical protein HMPREF6123_1921 + Prom 522275 - 522334 6.4 588 270 Op 1 17/0.000 + CDS 522354 - 523169 728 ## COG0061 Predicted sugar kinase 589 270 Op 2 . + CDS 523191 - 524849 1664 ## COG0497 ATPase involved in DNA repair 590 270 Op 3 . + CDS 524894 - 526342 1366 ## COG0297 Glycogen synthase 591 270 Op 4 . + CDS 526356 - 526820 636 ## COG1963 Uncharacterized protein conserved in bacteria 592 270 Op 5 . + CDS 526916 - 527932 1005 ## Closa_3219 PpiC-type peptidyl-prolyl cis-trans isomerase - Term 527909 - 527944 4.3 593 271 Tu 1 . - CDS 527950 - 528804 705 ## COG1307 Uncharacterized protein conserved in bacteria - Prom 528876 - 528935 5.3 + Prom 528842 - 528901 4.7 594 272 Tu 1 . + CDS 528982 - 530697 1529 ## COG1227 Inorganic pyrophosphatase/exopolyphosphatase 595 273 Op 1 . + CDS 530880 - 531380 384 ## COG0703 Shikimate kinase 596 273 Op 2 . + CDS 531469 - 533679 1187 ## COG0480 Translation elongation factors (GTPases) 597 273 Op 3 . + CDS 533411 - 534133 425 ## COG3688 Predicted RNA-binding protein containing a PIN domain + Term 534215 - 534261 -0.6 + Prom 534136 - 534195 6.3 598 274 Tu 1 . + CDS 534308 - 535387 1420 ## PPSC2_c0783 membrane associated protein + Term 535401 - 535430 0.5 + Prom 535443 - 535502 6.3 599 275 Op 1 . + CDS 535629 - 535703 58 ## 600 275 Op 2 . + CDS 535713 - 537035 1411 ## COG1253 Hemolysins and related proteins containing CBS domains + Term 537132 - 537162 0.2 + Prom 537043 - 537102 5.2 601 276 Op 1 . + CDS 537221 - 537586 456 ## Shel_06720 copper chaperone 602 276 Op 2 2/0.038 + CDS 537592 - 538179 750 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 603 277 Op 1 . + CDS 538316 - 538846 594 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins 604 277 Op 2 . + CDS 538853 - 539356 582 ## COG0782 Transcription elongation factor - Term 539324 - 539364 6.4 605 278 Tu 1 . - CDS 539370 - 539831 404 ## COG0517 FOG: CBS domain - Prom 540026 - 540085 5.0 606 279 Tu 1 . - CDS 540219 - 540482 152 ## - Prom 540729 - 540788 3.7 + Prom 540460 - 540519 5.7 607 280 Op 1 . + CDS 540542 - 542809 2313 ## COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases 608 280 Op 2 . + CDS 542809 - 543450 468 ## COG0491 Zn-dependent hydrolases, including glyoxylases + Term 543481 - 543537 5.7 + Prom 543523 - 543582 7.3 609 281 Op 1 12/0.000 + CDS 543733 - 545928 2130 ## COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase 610 281 Op 2 . + CDS 545951 - 546361 347 ## COG0602 Organic radical activating enzymes + Term 546579 - 546618 -0.1 - Term 546353 - 546387 -0.4 611 282 Tu 1 . - CDS 546495 - 546926 537 ## gi|227871722|ref|ZP_03990131.1| hypothetical protein HMPREF6123_0070 612 283 Op 1 . - CDS 546979 - 547683 762 ## COG1802 Transcriptional regulators 613 283 Op 2 . - CDS 547739 - 548620 786 ## COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase - Prom 548655 - 548714 4.2 614 283 Op 3 . - CDS 548716 - 549531 693 ## SSA_1740 hypothetical protein - Prom 549611 - 549670 4.9 - Term 549668 - 549702 5.3 615 284 Tu 1 . - CDS 549750 - 552272 2410 ## COG4932 Predicted outer membrane protein - Prom 552361 - 552420 10.8 616 285 Op 1 27/0.000 + CDS 552684 - 553871 1111 ## COG0845 Membrane-fusion protein 617 285 Op 2 . + CDS 553878 - 556934 2806 ## COG0841 Cation/multidrug efflux pump + Prom 556936 - 556995 3.5 618 286 Op 1 . + CDS 557107 - 558306 1151 ## Closa_0525 hypothetical protein + Prom 558329 - 558388 2.0 619 286 Op 2 . + CDS 558409 - 559794 1208 ## gi|227873745|ref|ZP_03991975.1| conserved hypothetical protein + Term 559839 - 559877 6.1 - Term 559815 - 559878 10.0 620 287 Tu 1 . - CDS 559883 - 560680 899 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - Prom 560806 - 560865 5.7 + Prom 561075 - 561134 2.9 621 288 Tu 1 . + CDS 561187 - 562437 1173 ## COG0531 Amino acid transporters + Term 562488 - 562514 -0.6 - Term 562428 - 562469 -0.3 622 289 Tu 1 . - CDS 562642 - 564120 1357 ## COG4624 Iron only hydrogenase large subunit, C-terminal domain + Prom 564202 - 564261 3.8 623 290 Op 1 . + CDS 564362 - 565825 1316 ## gi|227871718|ref|ZP_03990127.1| hypothetical protein HMPREF6123_0066 + Term 565850 - 565890 2.3 + Prom 565880 - 565939 7.0 624 290 Op 2 . + CDS 565979 - 567583 1369 ## COG1757 Na+/H+ antiporter + Term 567629 - 567694 18.1 + Prom 567683 - 567742 10.8 625 291 Op 1 . + CDS 567805 - 568035 402 ## COG0236 Acyl carrier protein 626 291 Op 2 10/0.000 + CDS 568091 - 568963 843 ## COG0777 Acetyl-CoA carboxylase beta subunit + Term 568981 - 569007 -1.0 627 291 Op 3 . + CDS 569019 - 569831 871 ## COG0825 Acetyl-CoA carboxylase alpha subunit 628 291 Op 4 . + CDS 569930 - 570967 852 ## COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III 629 291 Op 5 3/0.029 + CDS 571033 - 571941 951 ## COG2070 Dioxygenases related to 2-nitropropane dioxygenase + Prom 572058 - 572117 3.3 630 292 Op 1 26/0.000 + CDS 572154 - 573095 950 ## COG0331 (acyl-carrier-protein) S-malonyltransferase 631 292 Op 2 11/0.000 + CDS 573074 - 573817 189 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 632 292 Op 3 8/0.000 + CDS 573833 - 575062 1267 ## COG0304 3-oxoacyl-(acyl-carrier-protein) synthase + Term 575093 - 575132 -0.9 633 292 Op 4 . + CDS 575311 - 575739 409 ## COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases + Prom 575873 - 575932 10.1 634 293 Tu 1 . + CDS 576006 - 576500 645 ## EUBELI_01717 hypothetical protein + Term 576583 - 576620 4.6 + Prom 576590 - 576649 3.5 635 294 Op 1 . + CDS 576698 - 578851 2726 ## COG0342 Preprotein translocase subunit SecD 636 294 Op 2 15/0.000 + CDS 578934 - 580121 1126 ## COG0343 Queuine/archaeosine tRNA-ribosyltransferase + Prom 580137 - 580196 4.2 637 294 Op 3 . + CDS 580226 - 580504 378 ## COG1862 Preprotein translocase subunit YajC 638 294 Op 4 . + CDS 580531 - 581607 969 ## COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes + Prom 581683 - 581742 9.3 639 295 Op 1 . + CDS 581791 - 582252 340 ## gi|227871696|ref|ZP_03990107.1| hypothetical protein HMPREF6123_0046 640 295 Op 2 . + CDS 582313 - 582834 671 ## Closa_3786 hypothetical protein + Prom 583041 - 583100 3.6 641 296 Op 1 58/0.000 + CDS 583146 - 587036 4353 ## COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit 642 296 Op 2 . + CDS 587047 - 590748 3617 ## COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit + Term 590790 - 590825 0.6 + Prom 590806 - 590865 2.4 643 296 Op 3 . + CDS 590905 - 591465 553 ## COG1309 Transcriptional regulator + Term 591515 - 591571 14.5 + Prom 591485 - 591544 5.8 644 297 Tu 1 . + CDS 591632 - 593404 1415 ## COG4716 Myosin-crossreactive antigen + Term 593450 - 593479 2.1 + Prom 593590 - 593649 3.6 645 298 Op 1 . + CDS 593685 - 595625 1235 ## Closa_0992 hypothetical protein 646 298 Op 2 35/0.000 + CDS 595648 - 596991 1479 ## COG1653 ABC-type sugar transport system, periplasmic component + Term 596999 - 597043 10.5 647 299 Op 1 38/0.000 + CDS 597053 - 597958 1022 ## COG1175 ABC-type sugar transport systems, permease components 648 299 Op 2 . + CDS 597977 - 598804 869 ## COG0395 ABC-type sugar transport system, permease component + Prom 598823 - 598882 8.8 649 300 Tu 1 . + CDS 598911 - 600029 1160 ## bpr_I1216 hypothetical protein + Term 600049 - 600093 10.2 - Term 600043 - 600071 -1.0 650 301 Op 1 . - CDS 600080 - 600328 262 ## gi|227871688|ref|ZP_03990100.1| carbon storage regulator 651 301 Op 2 . - CDS 600377 - 600838 441 ## COG1699 Uncharacterized protein conserved in bacteria 652 301 Op 3 . - CDS 600875 - 601441 448 ## gi|227871686|ref|ZP_03990098.1| hypothetical protein HMPREF6123_0037 - Prom 601462 - 601521 4.8 - Term 601565 - 601608 0.2 653 302 Tu 1 . - CDS 601654 - 602883 1181 ## gi|227871685|ref|ZP_03990097.1| hypothetical protein HMPREF6123_0036 - Prom 603004 - 603063 4.1 + Prom 602998 - 603057 5.0 654 303 Tu 1 . + CDS 603119 - 604141 838 ## COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D + Term 604221 - 604256 7.2 - Term 604207 - 604246 5.1 655 304 Op 1 . - CDS 604289 - 605311 878 ## COG0053 Predicted Co/Zn/Cd cation transporters 656 304 Op 2 . - CDS 605396 - 606736 1003 ## Closa_3037 hypothetical protein - Prom 606776 - 606835 6.9 - Term 606947 - 606999 14.4 657 305 Op 1 . - CDS 607056 - 608891 2030 ## COG1256 Flagellar hook-associated protein 658 305 Op 2 . - CDS 608936 - 609373 399 ## gi|227871682|ref|ZP_03990095.1| hypothetical protein HMPREF6123_0034 659 305 Op 3 . - CDS 609386 - 609697 356 ## gi|227871681|ref|ZP_03990094.1| hypothetical protein HMPREF6123_0033 - Prom 609934 - 609993 8.6 + Prom 609869 - 609928 10.9 660 306 Op 1 . + CDS 609963 - 611369 1096 ## Closa_3422 hypothetical protein 661 306 Op 2 . + CDS 611443 - 611778 326 ## COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB + Prom 611787 - 611846 2.9 662 307 Op 1 1/0.105 + CDS 611906 - 613297 1355 ## COG5263 FOG: Glucan-binding domain (YG repeat) 663 307 Op 2 . + CDS 613315 - 614652 1230 ## COG5263 FOG: Glucan-binding domain (YG repeat) + Term 614659 - 614701 8.2 + Prom 614677 - 614736 14.1 664 308 Op 1 . + CDS 614758 - 615651 888 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 665 308 Op 2 . + CDS 615741 - 616370 427 ## Closa_3420 type IV pilus assembly PilZ 666 308 Op 3 . + CDS 616383 - 616481 64 ## 667 308 Op 4 1/0.105 + CDS 616500 - 617765 1085 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 668 308 Op 5 . + CDS 617798 - 618346 467 ## COG3475 LPS biosynthesis protein + Prom 618375 - 618434 3.0 669 309 Op 1 . + CDS 618460 - 619749 900 ## EUBELI_00243 lipopolysaccharide cholinephosphotransferase 670 309 Op 2 . + CDS 619762 - 621714 1678 ## COG3475 LPS biosynthesis protein 671 309 Op 3 . + CDS 621736 - 623838 1075 ## DSY3019 hypothetical protein 672 309 Op 4 3/0.029 + CDS 623875 - 625905 1200 ## COG3475 LPS biosynthesis protein 673 309 Op 5 3/0.029 + CDS 625952 - 627931 1000 ## COG3475 LPS biosynthesis protein + Prom 627958 - 628017 7.1 674 310 Op 1 . + CDS 628068 - 630056 1128 ## COG3475 LPS biosynthesis protein + Prom 630059 - 630118 1.7 675 310 Op 2 . + CDS 630145 - 632169 1154 ## DSY3019 hypothetical protein 676 310 Op 3 . + CDS 632189 - 634219 1932 ## COG2513 PEP phosphonomutase and related enzymes + Prom 634311 - 634370 5.8 677 311 Op 1 . + CDS 634406 - 635569 1065 ## COG1454 Alcohol dehydrogenase, class IV 678 311 Op 2 . + CDS 635582 - 636691 1094 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] + Term 636755 - 636820 2.7 + Prom 637277 - 637336 3.7 679 312 Tu 1 . + CDS 637410 - 637841 389 ## COG2340 Uncharacterized protein with SCP/PR1 domains + Term 637905 - 637953 11.5 + Prom 637940 - 637999 3.9 680 313 Op 1 . + CDS 638022 - 638237 216 ## gi|227873567|ref|ZP_03991809.1| hypothetical protein HMPREF6123_1748 681 313 Op 2 . + CDS 638218 - 638679 242 ## bpr_I2507 hypothetical protein 682 313 Op 3 . + CDS 638664 - 639473 483 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Term 639509 - 639564 3.4 + Prom 639518 - 639577 4.6 683 314 Tu 1 . + CDS 639660 - 641801 1800 ## COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain + Term 641830 - 641882 15.3 + Prom 642036 - 642095 6.9 684 315 Op 1 . + CDS 642194 - 642514 367 ## Closa_3470 flagellar hook-basal body complex protein FliE 685 315 Op 2 19/0.000 + CDS 642539 - 644203 1623 ## COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein 686 315 Op 3 . + CDS 644169 - 645248 1097 ## COG1536 Flagellar motor switch protein 687 315 Op 4 . + CDS 645235 - 646041 1000 ## Closa_3467 hypothetical protein 688 315 Op 5 . + CDS 646045 - 647355 1242 ## COG1157 Flagellar biosynthesis/type III secretory pathway ATPase 689 315 Op 6 . + CDS 647393 - 647698 288 ## gi|227873549|ref|ZP_03991792.1| hypothetical protein HMPREF6123_1731 690 315 Op 7 . + CDS 647710 - 647829 170 ## 691 315 Op 8 . + CDS 647861 - 649072 1047 ## gi|227873547|ref|ZP_03991791.1| conserved hypothetical protein 692 315 Op 9 . + CDS 649082 - 649903 986 ## gi|291562026|emb|CBL40842.1| Flagellar hook capping protein + Prom 649943 - 650002 3.2 693 316 Tu 1 . + CDS 650057 - 651076 1047 ## COG4786 Flagellar basal body rod protein + Prom 651108 - 651167 2.4 694 317 Op 1 . + CDS 651219 - 651455 239 ## gi|227873543|ref|ZP_03991788.1| hypothetical protein HMPREF6123_1727 695 317 Op 2 19/0.000 + CDS 651498 - 652307 904 ## COG1291 Flagellar motor component 696 317 Op 3 . + CDS 652307 - 653281 789 ## COG1360 Flagellar motor protein 697 317 Op 4 . + CDS 653363 - 654550 1191 ## COG1868 Flagellar motor switch protein 698 317 Op 5 . + CDS 654625 - 654993 446 ## COG0784 FOG: CheY-like receiver 699 317 Op 6 . + CDS 655011 - 655460 333 ## COG1558 Flagellar basal body rod protein 700 317 Op 7 . + CDS 655513 - 656949 1691 ## COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation 701 317 Op 8 . + CDS 656949 - 657383 410 ## gi|227873536|ref|ZP_03991781.1| hypothetical protein HMPREF6123_1720 702 317 Op 9 . + CDS 657376 - 658032 615 ## COG1338 Flagellar biosynthesis pathway, component FliP 703 318 Op 1 . + CDS 658133 - 658399 362 ## gi|227873534|ref|ZP_03991779.1| flagellar biosynthesis protein FliQ 704 318 Op 2 10/0.000 + CDS 658401 - 659153 592 ## COG1684 Flagellar biosynthesis pathway, component FliR + Prom 659191 - 659250 4.6 705 318 Op 3 13/0.000 + CDS 659281 - 660366 970 ## COG1377 Flagellar biosynthesis pathway, component FlhB 706 318 Op 4 2/0.038 + CDS 660359 - 662515 1914 ## COG1298 Flagellar biosynthesis pathway, component FlhA 707 318 Op 5 . + CDS 662567 - 663346 774 ## COG1191 DNA-directed RNA polymerase specialized sigma subunit 708 319 Op 1 8/0.000 + CDS 663551 - 664321 896 ## COG4786 Flagellar basal body rod protein 709 319 Op 2 . + CDS 664363 - 665166 821 ## COG4786 Flagellar basal body rod protein 710 319 Op 3 8/0.000 + CDS 665199 - 665816 574 ## COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation 711 319 Op 4 1/0.105 + CDS 665818 - 666306 370 ## COG1871 Chemotaxis protein; stimulates methylation of MCP proteins 712 319 Op 5 . + CDS 666388 - 667338 988 ## COG0835 Chemotaxis signal transduction protein + Term 667396 - 667438 3.1 + Prom 667473 - 667532 3.8 713 320 Op 1 . + CDS 667656 - 667973 349 ## gi|227874261|ref|ZP_03992457.1| hypothetical protein HMPREF6123_2396 714 320 Op 2 . + CDS 667817 - 668725 639 ## gi|227873518|ref|ZP_03991764.1| hypothetical protein HMPREF6123_1703 715 320 Op 3 . + CDS 668755 - 669567 799 ## COG1192 ATPases involved in chromosome partitioning 716 320 Op 4 . + CDS 669536 - 670360 975 ## Closa_3440 Late competence development protein ComFB + Term 670419 - 670468 6.2 + Prom 670419 - 670478 4.1 717 321 Tu 1 . + CDS 670702 - 673248 2625 ## COG1345 Flagellar capping protein + Term 673291 - 673326 7.4 + Prom 673319 - 673378 4.5 718 322 Tu 1 . + CDS 673406 - 674656 1242 ## COG1301 Na+/H+-dicarboxylate symporters + Term 674687 - 674731 7.5 + Prom 674695 - 674754 7.2 719 323 Tu 1 . + CDS 674829 - 675272 519 ## Closa_3437 flagellar protein FliS + Term 675322 - 675368 2.2 + Prom 675295 - 675354 3.3 720 324 Op 1 . + CDS 675387 - 675788 340 ## gi|227873508|ref|ZP_03991755.1| hypothetical protein HMPREF6123_1694 721 324 Op 2 . + CDS 675872 - 677776 1379 ## Closa_3434 hypothetical protein + Prom 677860 - 677919 5.8 722 325 Op 1 59/0.000 + CDS 678073 - 678501 713 ## PROTEIN SUPPORTED gi|227873501|ref|ZP_03991750.1| ribosomal protein L13 723 325 Op 2 . + CDS 678516 - 678908 637 ## PROTEIN SUPPORTED gi|227873500|ref|ZP_03991749.1| ribosomal protein S9 + Term 678936 - 678964 -0.9 + Prom 679411 - 679470 4.2 724 326 Tu 1 . + CDS 679559 - 679795 296 ## + Term 679815 - 679844 2.1 725 327 Tu 1 . - CDS 680699 - 682636 2163 ## COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains - Prom 682840 - 682899 7.8 + Prom 683018 - 683077 3.1 726 328 Op 1 59/0.000 + CDS 683115 - 683306 321 ## PROTEIN SUPPORTED gi|227873501|ref|ZP_03991750.1| ribosomal protein L13 727 328 Op 2 . + CDS 683320 - 683712 660 ## PROTEIN SUPPORTED gi|227873500|ref|ZP_03991749.1| ribosomal protein S9 + Term 683734 - 683777 3.4 - Term 683841 - 683887 4.3 728 329 Tu 1 . - CDS 683894 - 684127 180 ## bpr_I0632 phage integrase family protein - Prom 684221 - 684280 3.5 729 330 Tu 1 . - CDS 684493 - 685227 259 ## COG2188 Transcriptional regulators - Prom 685275 - 685334 8.1 730 331 Op 1 . + CDS 685518 - 687071 624 ## COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold 731 331 Op 2 . + CDS 687105 - 687455 303 ## COG1082 Sugar phosphate isomerases/epimerases 732 331 Op 3 . + CDS 687473 - 688888 1040 ## COG1288 Predicted membrane protein 733 331 Op 4 3/0.029 + CDS 688924 - 689886 518 ## COG2222 Predicted phosphosugar isomerases + Prom 689888 - 689947 3.3 734 332 Tu 1 . + CDS 689994 - 690845 498 ## COG0524 Sugar kinases, ribokinase family + Prom 690977 - 691036 4.0 735 333 Tu 1 . + CDS 691060 - 691698 229 ## COG2755 Lysophospholipase L1 and related esterases + Prom 691857 - 691916 5.9 736 334 Tu 1 . + CDS 691941 - 693143 628 ## COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family 737 335 Tu 1 . - CDS 693159 - 693560 204 ## COG4271 Predicted nucleotide-binding protein containing TIR -like domain - Prom 693689 - 693748 3.6 + Prom 693647 - 693706 4.6 738 336 Op 1 . + CDS 693767 - 694507 519 ## BF1093 hypothetical protein 739 336 Op 2 . + CDS 694504 - 695547 652 ## LCAZH_0050 hypothetical protein 740 337 Tu 1 . - CDS 696143 - 696520 149 ## - Prom 696601 - 696660 2.5 741 338 Op 1 . - CDS 696662 - 696796 57 ## 742 338 Op 2 . - CDS 696793 - 696984 56 ## - Prom 697004 - 697063 3.9 743 339 Tu 1 . + CDS 697058 - 698317 1035 ## Closa_0416 cell wall binding repeat-containing protein + Term 698409 - 698436 0.1 - Term 698533 - 698564 3.1 744 340 Tu 1 . - CDS 698603 - 699004 224 ## HMPREF0573_10444 sensor histidine kinase (EC:2.7.13.3) - Prom 699225 - 699284 7.7 + Prom 699181 - 699240 13.2 745 341 Op 1 35/0.000 + CDS 699266 - 700489 1369 ## COG1653 ABC-type sugar transport system, periplasmic component 746 341 Op 2 38/0.000 + CDS 700533 - 701453 739 ## COG1175 ABC-type sugar transport systems, permease components 747 341 Op 3 . + CDS 701453 - 702277 722 ## COG0395 ABC-type sugar transport system, permease component + Prom 702295 - 702354 3.2 748 342 Op 1 11/0.000 + CDS 702380 - 704656 1928 ## COG1554 Trehalose and maltose hydrolases (possible phosphorylases) 749 342 Op 2 . + CDS 704661 - 705281 575 ## COG0637 Predicted phosphatase/phosphohexomutase + Term 705290 - 705321 0.0 + Prom 706018 - 706077 5.5 750 343 Tu 1 . + CDS 706158 - 707087 530 ## COG0524 Sugar kinases, ribokinase family + Prom 707091 - 707150 6.1 751 344 Op 1 15/0.000 + CDS 707210 - 708334 1181 ## COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein + Term 708385 - 708420 7.2 752 344 Op 2 24/0.000 + CDS 708447 - 710009 1197 ## COG3845 ABC-type uncharacterized transport systems, ATPase components 753 344 Op 3 26/0.000 + CDS 710000 - 711088 1051 ## COG4603 ABC-type uncharacterized transport system, permease component + Prom 711139 - 711198 2.3 754 344 Op 4 1/0.105 + CDS 711225 - 711998 529 ## COG1079 Uncharacterized ABC-type transport system, permease component 755 344 Op 5 . + CDS 712062 - 713027 938 ## COG1957 Inosine-uridine nucleoside N-ribohydrolase + Prom 713064 - 713123 3.0 756 345 Op 1 . + CDS 713157 - 713720 574 ## OEOE_0753 hypothetical protein 757 345 Op 2 . + CDS 713717 - 714724 624 ## COG1957 Inosine-uridine nucleoside N-ribohydrolase 758 345 Op 3 . + CDS 714728 - 716608 861 ## COG0524 Sugar kinases, ribokinase family + Term 716704 - 716747 7.9 + Prom 716994 - 717053 12.2 759 346 Tu 1 . + CDS 717077 - 718414 1476 ## COG3681 Uncharacterized conserved protein - Term 718479 - 718530 6.5 760 347 Op 1 . - CDS 718569 - 719027 191 ## 761 347 Op 2 . - CDS 719018 - 719350 182 ## COG2188 Transcriptional regulators - Prom 719387 - 719446 3.3 + Prom 719308 - 719367 7.7 762 348 Op 1 . + CDS 719421 - 720440 1171 ## COG0407 Uroporphyrinogen-III decarboxylase 763 348 Op 2 11/0.000 + CDS 720521 - 721636 325 ## PROTEIN SUPPORTED gi|149199369|ref|ZP_01876406.1| Ribosomal protein L22 764 348 Op 3 11/0.000 + CDS 721704 - 722195 421 ## COG3090 TRAP-type C4-dicarboxylate transport system, small permease component 765 348 Op 4 . + CDS 722188 - 723489 684 ## PROTEIN SUPPORTED gi|149195935|ref|ZP_01872991.1| Ribosomal protein L16 + Term 723511 - 723557 9.4 + Prom 723502 - 723561 7.2 766 349 Tu 1 . + CDS 723627 - 724373 745 ## COG2071 Predicted glutamine amidotransferases + Prom 724389 - 724448 2.0 767 350 Tu 1 . + CDS 724487 - 725491 689 ## COG1609 Transcriptional regulators + Prom 725581 - 725640 5.9 768 351 Op 1 16/0.000 + CDS 725682 - 726740 1510 ## COG1879 ABC-type sugar transport system, periplasmic component 769 351 Op 2 21/0.000 + CDS 726818 - 728332 177 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 770 351 Op 3 2/0.038 + CDS 728337 - 729299 1184 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 771 351 Op 4 2/0.038 + CDS 729369 - 730085 843 ## COG0036 Pentose-5-phosphate-3-epimerase 772 351 Op 5 . + CDS 730078 - 731007 794 ## COG1940 Transcriptional regulator/sugar kinase 773 351 Op 6 1/0.105 + CDS 731077 - 731535 595 ## COG0698 Ribose 5-phosphate isomerase RpiB + Term 731562 - 731606 5.4 + Prom 731702 - 731761 10.7 774 352 Op 1 31/0.000 + CDS 731867 - 732763 898 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 775 352 Op 2 34/0.000 + CDS 732783 - 733454 467 ## COG0765 ABC-type amino acid transport system, permease component 776 352 Op 3 . + CDS 733502 - 734215 244 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 777 352 Op 4 . + CDS 734215 - 735201 437 ## COG0435 Predicted glutathione S-transferase + Term 735296 - 735334 7.1 + Prom 735251 - 735310 4.5 778 353 Tu 1 . + CDS 735345 - 735449 57 ## 779 354 Op 1 . + CDS 735597 - 738095 1371 ## COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase + Term 738106 - 738158 2.9 780 354 Op 2 . + CDS 738167 - 739249 747 ## CA_C0802 hypothetical protein 781 354 Op 3 . + CDS 739256 - 739615 439 ## COG0818 Diacylglycerol kinase 782 355 Op 1 . + CDS 739732 - 740322 431 ## COG0575 CDP-diglyceride synthetase 783 355 Op 2 14/0.000 + CDS 740388 - 740990 351 ## COG1183 Phosphatidylserine synthase 784 355 Op 3 1/0.105 + CDS 741003 - 742016 793 ## COG0688 Phosphatidylserine decarboxylase 785 355 Op 4 . + CDS 742003 - 742968 864 ## COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases + Term 743035 - 743099 10.1 + Prom 743060 - 743119 8.8 786 356 Tu 1 . + CDS 743154 - 743465 402 ## SSA_1453 hypothetical protein + Term 743504 - 743563 -0.3 + Prom 743500 - 743559 1.9 787 357 Tu 1 . + CDS 743595 - 744221 539 ## EUBELI_01180 hypothetical protein - Term 744073 - 744106 0.5 788 358 Tu 1 . - CDS 744289 - 745230 988 ## COG0225 Peptide methionine sulfoxide reductase - Prom 745477 - 745536 5.3 + Prom 745258 - 745317 5.0 789 359 Tu 1 . + CDS 745538 - 745747 173 ## gi|315652962|ref|ZP_07905922.1| conserved hypothetical protein + SSU_RRNA 746213 - 747690 99.0 # AF481222 [D:1..1478] # 16S ribosomal RNA # Lachnospiraceae oral clone MCE10_236 # Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples. + 5S_RRNA 747792 - 747879 90.0 # CP000885 [D:447851..447967] # 5S ribosomal RNA # Clostridium phytofermentans ISDg # Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium. - Term 748121 - 748156 -0.3 790 360 Tu 1 . - CDS 748158 - 748301 59 ## gi|291458681|ref|ZP_06598071.1| conserved hypothetical protein - Prom 748331 - 748390 1.5 791 361 Tu 1 . + CDS 748400 - 748492 60 ## + 5S_RRNA 750570 - 750832 96.0 # AF142677 [R:48033..48709] # 5S ribosomal RNA # Bacillus megaterium # Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus. + TRNA 751113 - 751185 85.5 # Thr TGT 0 0 + TRNA 751264 - 751337 83.6 # Met CAT 0 0 + Prom 751263 - 751322 76.9 792 362 Op 1 . + CDS 751468 - 752424 610 ## COG0679 Predicted permeases + Prom 752658 - 752717 4.8 793 362 Op 2 . + CDS 752800 - 753636 764 ## Apre_0343 KilA domain-containing protein 794 362 Op 3 . + CDS 753714 - 754577 -27 ## gi|160946901|ref|ZP_02094104.1| hypothetical protein PEPMIC_00862 + Term 754674 - 754728 10.2 + Prom 754671 - 754730 8.1 795 363 Tu 1 . + CDS 754764 - 756854 2286 ## COG0326 Molecular chaperone, HSP90 family + Term 756891 - 756931 9.0 + Prom 756889 - 756948 3.1 796 364 Tu 1 . + CDS 757035 - 758996 2343 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit + Prom 759129 - 759188 6.2 797 365 Op 1 6/0.010 + CDS 759211 - 759480 311 ## COG4472 Uncharacterized protein conserved in bacteria + Term 759482 - 759519 3.0 798 365 Op 2 . + CDS 759539 - 759826 196 ## COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 799 365 Op 3 . + CDS 759850 - 759954 89 ## 800 365 Op 4 . + CDS 759978 - 760244 355 ## gi|227874507|ref|ZP_03992679.1| conserved hypothetical protein 801 365 Op 5 . + CDS 760266 - 762341 1944 ## COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily 802 365 Op 6 . + CDS 762345 - 762884 639 ## bpr_I2613 hypothetical protein 803 365 Op 7 4/0.029 + CDS 762859 - 763518 508 ## COG4122 Predicted O-methyltransferase 804 365 Op 8 . + CDS 763543 - 764769 1405 ## COG0826 Collagenase and related proteases 805 365 Op 9 . + CDS 764773 - 765627 376 ## COG1434 Uncharacterized conserved protein 806 365 Op 10 . + CDS 765703 - 768603 2313 ## COG1026 Predicted Zn-dependent peptidases, insulinase-like 807 366 Op 1 16/0.000 + CDS 768760 - 769716 925 ## COG1159 GTPase 808 366 Op 2 1/0.105 + CDS 769742 - 770392 483 ## COG1381 Recombinational DNA repair protein (RecF pathway) + Prom 770491 - 770550 5.0 809 367 Tu 1 . + CDS 770658 - 772052 1301 ## COG0423 Glycyl-tRNA synthetase (class II) + Term 772093 - 772137 8.4 + Prom 772140 - 772199 5.9 810 368 Op 1 5/0.019 + CDS 772255 - 773136 915 ## COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 811 368 Op 2 . + CDS 773149 - 774537 1459 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases - Term 774485 - 774531 1.6 812 369 Op 1 . - CDS 774700 - 776487 1487 ## COG0006 Xaa-Pro aminopeptidase 813 369 Op 2 . - CDS 776564 - 777199 543 ## Closa_2936 hypothetical protein - Prom 777302 - 777361 3.4 814 370 Tu 1 . - CDS 777394 - 779907 1999 ## COG2898 Uncharacterized conserved protein - Prom 779940 - 779999 4.2 - Term 779919 - 779950 1.1 815 371 Op 1 . - CDS 780075 - 780782 524 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 816 371 Op 2 6/0.010 - CDS 780849 - 782423 1631 ## COG3051 Citrate lyase, alpha subunit 817 371 Op 3 6/0.010 - CDS 782416 - 783318 835 ## COG2301 Citrate lyase beta subunit 818 371 Op 4 . - CDS 783311 - 783613 308 ## COG3052 Citrate lyase, gamma subunit - Prom 783658 - 783717 1.9 819 372 Op 1 . - CDS 783756 - 784091 248 ## bpr_I1103 HTH domain-containing protein 820 372 Op 2 . - CDS 784084 - 784434 335 ## COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system - Prom 784518 - 784577 7.4 + Prom 784622 - 784681 5.8 821 373 Tu 1 . + CDS 784843 - 786168 773 ## gi|227873897|ref|ZP_03992118.1| hypothetical protein HMPREF6123_2057 + Prom 786184 - 786243 4.5 822 374 Tu 1 . + CDS 786328 - 787413 925 ## COG3641 Predicted membrane protein, putative toxin regulator 823 375 Op 1 . + CDS 787558 - 788193 450 ## COG2315 Uncharacterized protein conserved in bacteria 824 375 Op 2 . + CDS 788270 - 789526 1074 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair 825 375 Op 3 . + CDS 789523 - 789627 68 ## 826 375 Op 4 . + CDS 789648 - 789953 193 ## COG3093 Plasmid maintenance system antidote protein 827 375 Op 5 . + CDS 789965 - 790537 484 ## COG1418 Predicted HD superfamily hydrolase + Prom 790711 - 790770 5.4 828 376 Op 1 3/0.029 + CDS 790837 - 792462 1785 ## COG0281 Malic enzyme 829 376 Op 2 . + CDS 792474 - 793421 1014 ## COG0679 Predicted permeases + Term 793483 - 793529 5.1 + Prom 793573 - 793632 9.4 830 377 Tu 1 . + CDS 793663 - 793929 269 ## 831 378 Op 1 9/0.000 - CDS 793976 - 794245 160 ## COG3041 Uncharacterized protein conserved in bacteria 832 378 Op 2 . - CDS 794242 - 794514 329 ## COG3077 DNA-damage-inducible protein J - Prom 794623 - 794682 5.1 - Term 794575 - 794623 -0.6 833 379 Op 1 . - CDS 794687 - 794833 202 ## 834 379 Op 2 . - CDS 794870 - 795004 112 ## - Prom 795207 - 795266 7.1 + Prom 795099 - 795158 4.8 835 380 Op 1 . + CDS 795270 - 796100 549 ## COG0348 Polyferredoxin 836 380 Op 2 40/0.000 + CDS 796135 - 796812 538 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain + Prom 796876 - 796935 2.8 837 380 Op 3 4/0.029 + CDS 796966 - 797892 735 ## COG0642 Signal transduction histidine kinase + Prom 797933 - 797992 4.0 838 381 Op 1 36/0.000 + CDS 798117 - 798980 863 ## COG1136 ABC-type antimicrobial peptide transport system, ATPase component 839 381 Op 2 . + CDS 798983 - 800998 1601 ## COG0577 ABC-type antimicrobial peptide transport system, permease component + Prom 801003 - 801062 1.6 840 381 Op 3 . + CDS 801095 - 802477 1069 ## COG2312 Erythromycin esterase homolog + Term 802544 - 802605 19.3 - Term 802532 - 802593 19.3 841 382 Op 1 . - CDS 802688 - 803239 293 ## COG5002 Signal transduction histidine kinase 842 382 Op 2 . - CDS 803169 - 803984 448 ## BCAH187_A3808 putative lantibiotic biosynthesis sensor histidine kinase 843 382 Op 3 . - CDS 803968 - 804678 438 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 844 382 Op 4 . - CDS 804684 - 805415 343 ## GYMC61_1169 lantibiotic ABC transporter (permease) 845 382 Op 5 . - CDS 805408 - 805506 71 ## - Prom 805607 - 805666 7.8 846 383 Tu 1 . + CDS 805469 - 805552 65 ## - Term 805550 - 805578 -0.9 847 384 Op 1 . - CDS 805668 - 806162 191 ## gi|329117448|ref|ZP_08246165.1| lantibiotic protection ABC transporter, permease subunit, MutE/EpiE family 848 384 Op 2 . - CDS 806155 - 806859 288 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 - Prom 806906 - 806965 11.0 + Prom 806939 - 806998 8.6 849 385 Tu 1 . + CDS 807140 - 808645 1301 ## COG1672 Predicted ATPase (AAA+ superfamily) + Prom 808648 - 808707 6.0 850 386 Op 1 . + CDS 808762 - 809016 320 ## Intca_2979 prevent-host-death family protein 851 386 Op 2 . + CDS 809016 - 809312 177 ## COG4115 Uncharacterized protein conserved in bacteria + Prom 809319 - 809378 2.1 852 387 Tu 1 . + CDS 809399 - 809779 346 ## bpr_I2654 hypothetical protein + Term 809913 - 809953 -0.8 - Term 809712 - 809760 2.2 853 388 Tu 1 . - CDS 809793 - 810389 408 ## PROTEIN SUPPORTED gi|157164512|ref|YP_001467500.1| 50S ribosomal protein L24 (BL23; 12 kDa DNA-binding protein; HPB12) - Prom 810446 - 810505 3.5 + Prom 810408 - 810467 7.2 854 389 Op 1 . + CDS 810534 - 810755 374 ## Selsp_1987 hypothetical protein 855 389 Op 2 . + CDS 810752 - 811021 177 ## COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system + Prom 811111 - 811170 3.3 856 390 Op 1 . + CDS 811236 - 812144 905 ## COG0598 Mg2+ and Co2+ transporters 857 390 Op 2 . + CDS 812163 - 812300 144 ## gi|227873864|ref|ZP_03992086.1| ECF subfamily RNA polymerase sigma-24 factor + Prom 812408 - 812467 5.6 858 391 Tu 1 . + CDS 812537 - 813148 473 ## PROTEIN SUPPORTED gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent + Term 813247 - 813277 1.1 - Term 813224 - 813272 3.4 859 392 Op 1 . - CDS 813388 - 813813 370 ## COG2314 Predicted membrane protein 860 392 Op 2 . - CDS 813835 - 814209 319 ## 861 392 Op 3 . - CDS 814209 - 815255 895 ## COG4260 Putative virion core protein (lumpy skin disease virus) - Prom 815342 - 815401 10.7 + Prom 815544 - 815603 7.4 862 393 Tu 1 . + CDS 815807 - 816346 433 ## COG1555 DNA uptake protein and related DNA-binding proteins + Prom 816442 - 816501 4.9 863 394 Op 1 . + CDS 816570 - 817772 938 ## COG1686 D-alanyl-D-alanine carboxypeptidase 864 394 Op 2 . + CDS 817805 - 818788 870 ## COG1897 Homoserine trans-succinylase 865 394 Op 3 . + CDS 818819 - 820057 1302 ## COG2195 Di- and tripeptidases + Term 820109 - 820158 10.1 + Prom 820679 - 820738 8.7 866 395 Tu 1 . + CDS 820843 - 821436 389 ## COG0212 5-formyltetrahydrofolate cyclo-ligase + Term 821485 - 821526 -0.4 867 396 Op 1 . - CDS 821456 - 822547 253 ## COG0564 Pseudouridylate synthases, 23S RNA-specific 868 396 Op 2 . - CDS 822549 - 823151 486 ## COG1898 dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes - Prom 823190 - 823249 10.3 + Prom 823217 - 823276 11.0 869 397 Op 1 . + CDS 823346 - 823771 414 ## COG0735 Fe2+/Zn2+ uptake regulation proteins 870 397 Op 2 2/0.038 + CDS 823854 - 824399 639 ## COG1592 Rubrerythrin + Term 824467 - 824500 4.0 + Prom 824545 - 824604 4.6 871 398 Tu 1 . + CDS 824672 - 825220 616 ## COG1592 Rubrerythrin + Term 825297 - 825348 13.5 + Prom 825485 - 825544 4.5 872 399 Op 1 . + CDS 825570 - 827102 1563 ## COG0696 Phosphoglyceromutase 873 399 Op 2 . + CDS 827175 - 828062 897 ## COG1307 Uncharacterized protein conserved in bacteria 874 400 Tu 1 . - CDS 828155 - 828631 108 ## COG2333 Predicted hydrolase (metallo-beta-lactamase superfamily) - Prom 828660 - 828719 2.1 875 401 Tu 1 . - CDS 828772 - 830895 512 ## COG0658 Predicted membrane metal-binding protein - Prom 830979 - 831038 4.4 - Term 831133 - 831162 0.5 876 402 Tu 1 . - CDS 831298 - 831561 369 ## PROTEIN SUPPORTED gi|227874465|ref|ZP_03992641.1| ribosomal protein S20 - Prom 831802 - 831861 11.1 + Prom 831748 - 831807 9.8 877 403 Op 1 . + CDS 831868 - 834855 1737 ## COG5263 FOG: Glucan-binding domain (YG repeat) + Prom 834885 - 834944 2.0 878 403 Op 2 . + CDS 834974 - 836788 2097 ## COG0481 Membrane GTPase LepA 879 404 Tu 1 . - CDS 837025 - 837963 919 ## COG1250 3-hydroxyacyl-CoA dehydrogenase - Prom 838150 - 838209 7.5 + Prom 838242 - 838301 6.4 880 405 Tu 1 . + CDS 838355 - 839377 835 ## COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase + Term 839402 - 839458 15.4 - Term 839390 - 839444 17.1 881 406 Tu 1 . - CDS 839541 - 840857 662 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases - Prom 841090 - 841149 4.7 + Prom 840746 - 840805 6.0 882 407 Tu 1 . + CDS 840922 - 841950 702 ## COG1466 DNA polymerase III, delta subunit + Prom 841970 - 842029 2.4 883 408 Op 1 . + CDS 842056 - 842535 485 ## Closa_0879 3D domain protein 884 408 Op 2 . + CDS 842582 - 843109 405 ## Closa_0878 3D domain protein + Term 843120 - 843171 7.9 + Prom 843114 - 843173 6.9 885 409 Op 1 . + CDS 843210 - 845027 837 ## COG0210 Superfamily I DNA and RNA helicases + Term 845082 - 845110 -1.0 886 409 Op 2 40/0.000 + CDS 845120 - 845794 702 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 887 409 Op 3 . + CDS 845797 - 847326 1359 ## COG0642 Signal transduction histidine kinase 888 409 Op 4 . + CDS 847353 - 848084 764 ## Shewana3_0129 response regulator receiver protein + Term 848164 - 848208 9.0 + Prom 848110 - 848169 2.7 889 410 Op 1 . + CDS 848214 - 848465 227 ## 890 410 Op 2 . + CDS 848462 - 849310 403 ## gi|227871644|ref|ZP_03990062.1| hypothetical protein HMPREF6123_0001 891 410 Op 3 . + CDS 849141 - 850031 438 ## COG0122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase 892 410 Op 4 . + CDS 850031 - 850627 473 ## COG1896 Predicted hydrolases of HD superfamily 893 410 Op 5 . + CDS 850631 - 851545 883 ## bpr_I2282 hypothetical protein 894 410 Op 6 . + CDS 851558 - 853168 1118 ## bpr_I2260 hypothetical protein + Prom 853177 - 853236 2.9 895 410 Op 7 . + CDS 853267 - 854802 1154 ## COG0714 MoxR-like ATPases + Term 854822 - 854867 -0.3 - TRNA 854949 - 855022 84.5 # Pro TGG 0 0 + Prom 855153 - 855212 5.2 896 411 Op 1 56/0.000 + CDS 855303 - 855725 705 ## PROTEIN SUPPORTED gi|227874431|ref|ZP_03992611.1| ribosomal protein S12 + Prom 855754 - 855813 4.8 897 411 Op 2 51/0.000 + CDS 855912 - 856382 768 ## PROTEIN SUPPORTED gi|227874430|ref|ZP_03992610.1| ribosomal protein S7 898 411 Op 3 30/0.000 + CDS 856397 - 858514 2010 ## COG0480 Translation elongation factors (GTPases) + Term 858603 - 858646 2.1 + Prom 858582 - 858641 2.0 899 411 Op 4 . + CDS 858670 - 859863 1425 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 + Term 859881 - 859924 10.8 + Prom 860067 - 860126 9.8 900 412 Tu 1 . + CDS 860161 - 860649 467 ## COG3760 Uncharacterized conserved protein + Term 860762 - 860809 4.3 + Prom 860790 - 860849 5.5 901 413 Tu 1 . + CDS 860963 - 861418 248 ## COG1943 Transposase and inactivated derivatives + Prom 861645 - 861704 6.5 902 414 Op 1 . + CDS 861755 - 862066 263 ## gi|227874427|ref|ZP_03992607.1| conserved hypothetical protein + Term 862083 - 862121 3.4 903 414 Op 2 . + CDS 862153 - 862785 445 ## gi|227874427|ref|ZP_03992607.1| conserved hypothetical protein 904 415 Tu 1 . + CDS 862894 - 863919 945 ## COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) + Prom 863921 - 863980 3.3 905 416 Tu 1 . + CDS 864047 - 864769 476 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 906 417 Tu 1 . + CDS 864916 - 866907 1771 ## COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) 907 418 Tu 1 . + CDS 866993 - 867868 791 ## COG0682 Prolipoprotein diacylglyceryltransferase + Term 867881 - 867941 -0.5 - Term 867877 - 867924 11.2 908 419 Tu 1 . - CDS 867964 - 870189 2577 ## COG0840 Methyl-accepting chemotaxis protein + Prom 870446 - 870505 4.7 909 420 Op 1 16/0.000 + CDS 870657 - 871706 1219 ## COG1879 ABC-type sugar transport system, periplasmic component + Term 871732 - 871783 1.6 910 420 Op 2 21/0.000 + CDS 871861 - 873363 186 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 911 420 Op 3 11/0.000 + CDS 873350 - 874297 972 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 912 420 Op 4 . + CDS 874300 - 875307 773 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 913 420 Op 5 . + CDS 875319 - 877211 1621 ## COG3250 Beta-galactosidase/beta-glucuronidase 914 420 Op 6 . + CDS 877281 - 877907 633 ## COG4475 Uncharacterized protein conserved in bacteria + Term 877975 - 878015 8.4 915 421 Op 1 . - CDS 878190 - 878903 286 ## gi|227873766|ref|ZP_03991995.1| conserved hypothetical protein 916 421 Op 2 . - CDS 878909 - 879628 662 ## COG0220 Predicted S-adenosylmethionine-dependent methyltransferase - Prom 879697 - 879756 7.2 + Prom 879698 - 879757 6.3 917 422 Tu 1 . + CDS 879777 - 881426 1603 ## COG3409 Putative peptidoglycan-binding domain-containing protein + Term 881437 - 881475 6.1 + Prom 881429 - 881488 5.8 918 423 Tu 1 . + CDS 881542 - 882462 918 ## Closa_3994 hypothetical protein + Term 882495 - 882529 2.1 + Prom 882469 - 882528 7.5 919 424 Op 1 . + CDS 882599 - 883504 556 ## Closa_0071 hypothetical protein 920 424 Op 2 . + CDS 883519 - 883857 367 ## gi|227873349|ref|ZP_03991610.1| conserved hypothetical protein 921 425 Tu 1 . - CDS 883767 - 884000 65 ## - Prom 884147 - 884206 2.0 922 426 Op 1 . + CDS 884033 - 884986 626 ## PROTEIN SUPPORTED gi|116517028|ref|YP_816079.1| glucokinase 923 426 Op 2 . + CDS 885002 - 887362 2225 ## COG1193 Mismatch repair ATPase (MutS family) + Prom 887390 - 887449 4.3 924 427 Op 1 40/0.000 + CDS 887500 - 888234 742 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 925 427 Op 2 7/0.000 + CDS 888240 - 889649 966 ## COG0642 Signal transduction histidine kinase 926 427 Op 3 . + CDS 889653 - 890876 930 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 927 427 Op 4 . + CDS 890889 - 891875 914 ## COG3481 Predicted HD-superfamily hydrolase 928 427 Op 5 . + CDS 891909 - 893624 1071 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases + Prom 893686 - 893745 2.1 929 428 Tu 1 . + CDS 893822 - 894769 998 ## COG0039 Malate/lactate dehydrogenases + Term 894816 - 894863 1.6 + Prom 894928 - 894987 11.4 930 429 Op 1 . + CDS 895011 - 895979 341 ## EUBREC_3455 hypothetical protein 931 429 Op 2 . + CDS 895964 - 896707 345 ## BLJ_0106 hypothetical protein + Prom 897038 - 897097 2.7 932 430 Tu 1 . + CDS 897311 - 898537 1391 ## COG0133 Tryptophan synthase beta chain + Term 898549 - 898589 9.1 + Prom 898711 - 898770 5.6 933 431 Tu 1 . + CDS 898970 - 899116 142 ## gi|317496596|ref|ZP_07954943.1| TipAS antibiotic-recognition domain-containing protein + Prom 899121 - 899180 3.0 934 432 Tu 1 . + CDS 899302 - 899703 220 ## COG0789 Predicted transcriptional regulators + Term 899807 - 899847 1.6 + Prom 899718 - 899777 5.5 935 433 Tu 1 . + CDS 899863 - 902112 2368 ## Spirs_0807 peptidoglycan-binding lysin domain protein + Term 902209 - 902242 4.0 + Prom 902214 - 902273 7.3 936 434 Tu 1 1/0.105 + CDS 902299 - 903342 1092 ## COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase + Term 903350 - 903393 8.9 + Prom 903376 - 903435 7.5 937 435 Op 1 . + CDS 903457 - 904497 835 ## COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 938 435 Op 2 . + CDS 904608 - 905828 824 ## PROTEIN SUPPORTED gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 + Term 905911 - 905949 9.5 + Prom 905855 - 905914 9.0 939 436 Tu 1 . + CDS 906037 - 906582 544 ## gi|227873336|ref|ZP_03991597.1| hypothetical protein HMPREF6123_1536 + Term 906636 - 906686 13.0 - Term 906625 - 906671 6.7 940 437 Tu 1 . - CDS 906680 - 907288 479 ## SpiBuddy_1139 regulatory protein TetR - Prom 907336 - 907395 5.0 + Prom 907264 - 907323 5.9 941 438 Op 1 1/0.105 + CDS 907424 - 909457 1912 ## COG1511 Predicted membrane protein 942 438 Op 2 . + CDS 909458 - 911611 1911 ## COG1033 Predicted exporters of the RND superfamily + Prom 911668 - 911727 1.5 943 439 Op 1 7/0.000 + CDS 911785 - 912354 587 ## COG0193 Peptidyl-tRNA hydrolase 944 439 Op 2 . + CDS 912364 - 913815 767 ## COG1197 Transcription-repair coupling factor (superfamily II helicase) 945 439 Op 3 . + CDS 913797 - 915836 2097 ## COG1197 Transcription-repair coupling factor (superfamily II helicase) + Prom 915847 - 915906 8.4 946 440 Op 1 1/0.105 + CDS 916126 - 916398 276 ## COG0776 Bacterial nucleoid DNA-binding protein 947 440 Op 2 . + CDS 916403 - 916642 165 ## COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) 948 440 Op 3 . + CDS 916639 - 916947 339 ## Closa_4064 Septum formation initiator + Term 916954 - 916999 9.1 949 441 Op 1 . + CDS 917015 - 917758 373 ## COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 950 441 Op 2 . + CDS 917815 - 918012 200 ## 951 441 Op 3 1/0.105 + CDS 918043 - 918594 537 ## COG0634 Hypoxanthine-guanine phosphoribosyltransferase 952 441 Op 4 . + CDS 918604 - 920673 1721 ## COG0366 Glycosidases + Term 920770 - 920823 12.8 - Term 920763 - 920803 4.1 953 442 Tu 1 . - CDS 920858 - 921091 233 ## gi|227873313|ref|ZP_03991576.1| hypothetical protein HMPREF6123_1515 - Prom 921248 - 921307 9.2 - Term 921238 - 921278 1.7 954 443 Tu 1 . - CDS 921310 - 922731 1078 ## COG1686 D-alanyl-D-alanine carboxypeptidase - Prom 922807 - 922866 2.2 955 444 Op 1 40/0.000 - CDS 922878 - 925025 1741 ## COG0642 Signal transduction histidine kinase 956 444 Op 2 . - CDS 925027 - 925740 875 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - TRNA 925899 - 925971 84.2 # Lys CTT 0 0 + Prom 925991 - 926050 3.0 957 445 Op 1 . + CDS 926084 - 926251 103 ## 958 445 Op 2 . + CDS 926281 - 928254 1975 ## COG4690 Dipeptidase + Term 928337 - 928385 16.3 + Prom 928364 - 928423 4.8 959 446 Tu 1 . + CDS 928536 - 928991 220 ## COG1943 Transposase and inactivated derivatives + Term 929155 - 929196 8.2 - Term 929147 - 929177 4.3 960 447 Tu 1 . - CDS 929187 - 930017 796 ## COG0796 Glutamate racemase - Prom 930041 - 930100 4.3 + Prom 930047 - 930106 6.9 961 448 Op 1 . + CDS 930127 - 931068 1005 ## COG1493 Serine kinase of the HPr protein, regulates carbohydrate metabolism 962 448 Op 2 1/0.105 + CDS 931069 - 931944 715 ## COG0812 UDP-N-acetylmuramate dehydrogenase 963 448 Op 3 . + CDS 931929 - 932813 466 ## COG1660 Predicted P-loop-containing kinase 964 449 Op 1 . + CDS 933191 - 933622 474 ## COG1481 Uncharacterized protein conserved in bacteria + Term 933735 - 933765 -0.9 965 449 Op 2 . + CDS 933790 - 934050 333 ## COG1925 Phosphotransferase system, HPr-related proteins + Term 934093 - 934134 8.6 + Prom 934082 - 934141 6.3 966 450 Op 1 3/0.029 + CDS 934165 - 937641 3216 ## COG0587 DNA polymerase III, alpha subunit + Term 937647 - 937695 3.3 + Prom 937657 - 937716 3.0 967 450 Op 2 . + CDS 937737 - 938714 1121 ## COG0205 6-phosphofructokinase 968 450 Op 3 1/0.105 + CDS 938736 - 939794 909 ## COG0042 tRNA-dihydrouridine synthase + Term 939872 - 939907 8.1 + Prom 939895 - 939954 6.9 969 451 Op 1 2/0.038 + CDS 939981 - 940466 570 ## COG0782 Transcription elongation factor 970 451 Op 2 . + CDS 940534 - 942510 1965 ## COG1190 Lysyl-tRNA synthetase (class II) + Prom 942566 - 942625 2.9 971 452 Tu 1 . + CDS 942645 - 943376 202 ## gi|160946815|ref|ZP_02094018.1| hypothetical protein PEPMIC_00774 + Term 943394 - 943427 2.2 + Prom 943501 - 943560 6.6 972 453 Op 1 . + CDS 943587 - 943898 319 ## CD0413 putative single-strand binding protein 973 453 Op 2 . + CDS 943901 - 944116 381 ## CD1852 putative conjugative transposon membrane protein 974 453 Op 3 . + CDS 944128 - 944778 608 ## COG0073 EMAP domain + Term 944825 - 944862 7.1 + Prom 944851 - 944910 8.2 975 454 Op 1 . + CDS 944978 - 945085 176 ## 976 454 Op 2 . + CDS 945072 - 945821 419 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) + Term 945834 - 945874 3.5 + Prom 945956 - 946015 4.7 977 455 Op 1 . + CDS 946044 - 946274 244 ## LBF_2184 VagC-like protein 978 455 Op 2 . + CDS 946329 - 946493 146 ## 979 455 Op 3 . + CDS 946501 - 946644 103 ## + Prom 946744 - 946803 8.4 980 456 Op 1 . + CDS 946832 - 947167 323 ## Amico_1748 transcriptional regulator, XRE family 981 456 Op 2 . + CDS 947169 - 947921 523 ## Msm_1529 putative Zn peptidase 982 456 Op 3 . + CDS 947914 - 948450 249 ## Dtox_2246 hypothetical protein + Term 948458 - 948506 -0.1 + Prom 948492 - 948551 1.8 983 457 Tu 1 . + CDS 948573 - 948803 222 ## LBF_2184 VagC-like protein + Term 948886 - 948927 6.4 + Prom 948949 - 949008 6.4 984 458 Tu 1 . + CDS 949086 - 949703 595 ## COG1309 Transcriptional regulator + Prom 949738 - 949797 8.6 985 459 Op 1 35/0.000 + CDS 949876 - 951621 234 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 986 459 Op 2 . + CDS 951615 - 953396 237 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 + Term 953474 - 953532 13.2 - Term 953473 - 953510 7.0 987 460 Op 1 . - CDS 953539 - 953868 211 ## EUBELI_20442 hypothetical protein 988 460 Op 2 . - CDS 953865 - 954185 343 ## EUBELI_20443 hypothetical protein - Prom 954205 - 954264 5.7 + Prom 954361 - 954420 5.9 989 461 Tu 1 . + CDS 954469 - 954621 135 ## + Prom 954768 - 954827 5.2 990 462 Tu 1 . + CDS 954969 - 958691 1481 ## RHE_CH01994 hypothetical protein + Term 958712 - 958758 -0.9 + Prom 958771 - 958830 2.9 991 463 Op 1 . + CDS 958851 - 960191 794 ## COG1373 Predicted ATPase (AAA+ superfamily) 992 463 Op 2 . + CDS 960231 - 961574 939 ## Cfla_0519 zinc finger SWIM domain protein + Prom 961617 - 961676 2.6 993 464 Tu 1 . + CDS 961701 - 965207 2357 ## Cfla_0518 hypothetical protein + Prom 965301 - 965360 8.4 994 465 Op 1 . + CDS 965404 - 966147 579 ## COG0500 SAM-dependent methyltransferases + Prom 966151 - 966210 5.7 995 465 Op 2 . + CDS 966233 - 967753 855 ## 996 465 Op 3 . + CDS 967809 - 968579 809 ## + Term 968635 - 968664 -0.2 997 466 Op 1 . + CDS 968690 - 971965 2505 ## Desac_2944 VWFA-related domain-containing protein 998 466 Op 2 . + CDS 971982 - 973808 1469 ## bpr_II250 hypothetical protein 999 466 Op 3 . + CDS 973825 - 974151 358 ## + Term 974196 - 974221 -0.5 + Prom 974338 - 974397 5.8 1000 467 Tu 1 . + CDS 974473 - 975831 863 ## COG1373 Predicted ATPase (AAA+ superfamily) + Term 975913 - 975964 13.4 - Term 975904 - 975948 4.7 1001 468 Op 1 25/0.000 - CDS 975986 - 977692 1265 ## COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) 1002 468 Op 2 . - CDS 977724 - 977987 296 ## COG1925 Phosphotransferase system, HPr-related proteins 1003 468 Op 3 . - CDS 978050 - 978820 693 ## COG1349 Transcriptional regulators of sugar metabolism - Prom 978847 - 978906 5.2 - Term 978860 - 978901 11.4 1004 469 Op 1 . - CDS 978909 - 979214 367 ## LSEI_2736 phosphotransferase system, galactitol-specific IIB component 1005 469 Op 2 2/0.038 - CDS 979218 - 980705 1389 ## COG3037 Uncharacterized protein conserved in bacteria 1006 469 Op 3 . - CDS 980728 - 981210 524 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 1007 469 Op 4 . - CDS 981227 - 982330 857 ## COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold - Prom 982427 - 982486 9.8 1008 470 Op 1 . + CDS 982752 - 982862 70 ## 1009 470 Op 2 . + CDS 982834 - 983676 706 ## COG3623 Putative L-xylulose-5-phosphate 3-epimerase 1010 470 Op 3 . + CDS 983717 - 984778 838 ## Apar_0328 FG-GAP repeat-containing protein + Prom 985322 - 985381 4.3 1011 471 Tu 1 . + CDS 985517 - 985783 220 ## SPN23F_18640 putative restriction enzyme + Term 985861 - 985887 -1.0 + Prom 986099 - 986158 6.9 1012 472 Op 1 . + CDS 986206 - 986541 126 ## HMPREF0421_21064 hypothetical protein 1013 472 Op 2 . + CDS 986463 - 987146 249 ## COG3344 Retron-type reverse transcriptase + Prom 987323 - 987382 4.1 1014 473 Tu 1 . + CDS 987419 - 987823 218 ## HMPREF0421_21064 hypothetical protein + Term 988014 - 988045 1.1 + Prom 987907 - 987966 6.1 1015 474 Op 1 . + CDS 988185 - 989081 831 ## COG0491 Zn-dependent hydrolases, including glyoxylases 1016 474 Op 2 . + CDS 989100 - 990302 747 ## SOR_1171 hypothetical protein + Term 990347 - 990393 6.1 + Prom 990336 - 990395 5.2 1017 475 Tu 1 . + CDS 990587 - 991024 142 ## gi|227871964|ref|ZP_03990352.1| conserved hypothetical protein 1018 476 Op 1 . + CDS 991147 - 992586 1208 ## FN0723 hypothetical protein 1019 476 Op 2 . + CDS 992589 - 995639 2311 ## FN0722 WD repeat-containing protein 1020 476 Op 3 . + CDS 995652 - 996281 536 ## + Term 996315 - 996368 13.1 - Term 996305 - 996354 3.8 1021 477 Tu 1 . - CDS 996442 - 997275 447 ## COG2340 Uncharacterized protein with SCP/PR1 domains - Prom 997391 - 997450 4.1 1022 478 Tu 1 . - CDS 997538 - 997723 138 ## - Prom 997743 - 997802 6.8 + Prom 997759 - 997818 8.5 1023 479 Op 1 . + CDS 997871 - 997966 57 ## 1024 479 Op 2 . + CDS 998020 - 998871 810 ## COG1737 Transcriptional regulators + Term 998875 - 998926 0.8 - Term 998927 - 998969 5.7 1025 480 Tu 1 . - CDS 998984 - 1000960 1729 ## COG0556 Helicase subunit of the DNA excision repair complex - Prom 1001013 - 1001072 8.3 + Prom 1001013 - 1001072 5.8 1026 481 Op 1 . + CDS 1001092 - 1002186 1124 ## COG0473 Isocitrate/isopropylmalate dehydrogenase + Prom 1002190 - 1002249 6.3 1027 481 Op 2 . + CDS 1002274 - 1004328 1209 ## PROTEIN SUPPORTED gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 + Term 1004340 - 1004380 5.2 - Term 1004322 - 1004375 13.9 1028 482 Tu 1 . - CDS 1004432 - 1004629 175 ## Closa_2512 XRE family transcriptional regulator - Prom 1004802 - 1004861 4.3 1029 483 Tu 1 . + CDS 1004721 - 1005623 507 ## COG1408 Predicted phosphohydrolases + Prom 1005668 - 1005727 2.1 1030 484 Op 1 21/0.000 + CDS 1005753 - 1006568 810 ## COG1354 Uncharacterized conserved protein 1031 484 Op 2 . + CDS 1006580 - 1007407 906 ## COG1386 Predicted transcriptional regulator containing the HTH domain + Prom 1007484 - 1007543 1.5 1032 485 Op 1 . + CDS 1007631 - 1008068 437 ## COG0756 dUTPase 1033 485 Op 2 . + CDS 1008115 - 1008795 916 ## gi|227874325|ref|ZP_03992510.1| hypothetical protein HMPREF6123_2449 1034 485 Op 3 . + CDS 1008813 - 1010180 1550 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs + Term 1010190 - 1010234 10.1 - Term 1010223 - 1010262 3.0 1035 486 Tu 1 . - CDS 1010284 - 1010808 414 ## Closa_2357 hypothetical protein - Prom 1010842 - 1010901 4.8 + Prom 1010734 - 1010793 5.1 1036 487 Op 1 . + CDS 1010966 - 1013593 1982 ## Closa_2355 hypothetical protein 1037 487 Op 2 . + CDS 1013607 - 1014851 1024 ## Closa_2354 hypothetical protein 1038 487 Op 3 . + CDS 1014853 - 1015638 685 ## Closa_2353 hypothetical protein 1039 487 Op 4 . + CDS 1015656 - 1018358 2219 ## COG0525 Valyl-tRNA synthetase 1040 487 Op 5 . + CDS 1018392 - 1018967 425 ## gi|227874317|ref|ZP_03992502.1| hypothetical protein HMPREF6123_2441 1041 487 Op 6 . + CDS 1018970 - 1019449 421 ## COG1576 Uncharacterized conserved protein + Term 1019517 - 1019554 -0.2 + Prom 1019451 - 1019510 4.4 1042 488 Tu 1 . + CDS 1019734 - 1020231 469 ## Closa_0702 CarD family transcriptional regulator + Term 1020258 - 1020303 5.8 + Prom 1020286 - 1020345 6.9 1043 489 Tu 1 . + CDS 1020373 - 1020777 302 ## Closa_0818 GtrA family protein 1044 490 Op 1 . + CDS 1020878 - 1022197 553 ## COG4485 Predicted membrane protein 1045 490 Op 2 . + CDS 1022230 - 1023558 1273 ## COG4485 Predicted membrane protein 1046 490 Op 3 . + CDS 1023582 - 1024256 637 ## COG3404 Methenyl tetrahydrofolate cyclohydrolase + Prom 1024258 - 1024317 3.7 1047 490 Op 4 . + CDS 1024353 - 1025189 829 ## COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase + Term 1025202 - 1025241 7.9 + Prom 1025191 - 1025250 3.5 1048 491 Op 1 12/0.000 + CDS 1025284 - 1026669 1163 ## COG4656 Predicted NADH:ubiquinone oxidoreductase, subunit RnfC 1049 491 Op 2 12/0.000 + CDS 1026673 - 1027611 854 ## COG4658 Predicted NADH:ubiquinone oxidoreductase, subunit RnfD 1050 491 Op 3 13/0.000 + CDS 1027613 - 1028221 913 ## COG4659 Predicted NADH:ubiquinone oxidoreductase, subunit RnfG 1051 491 Op 4 3/0.029 + CDS 1028233 - 1029012 882 ## COG4660 Predicted NADH:ubiquinone oxidoreductase, subunit RnfE 1052 491 Op 5 12/0.000 + CDS 1029009 - 1029623 835 ## COG4657 Predicted NADH:ubiquinone oxidoreductase, subunit RnfA 1053 491 Op 6 . + CDS 1029642 - 1030511 1035 ## COG2878 Predicted NADH:ubiquinone oxidoreductase, subunit RnfB + Prom 1030636 - 1030695 7.5 1054 492 Op 1 . + CDS 1030833 - 1031099 267 ## gi|227874297|ref|ZP_03992484.1| conserved hypothetical protein 1055 492 Op 2 . + CDS 1031157 - 1031591 306 ## bpr_I0161 hypothetical protein 1056 492 Op 3 40/0.000 + CDS 1031595 - 1032356 783 ## COG0356 F0F1-type ATP synthase, subunit a + Prom 1032387 - 1032446 4.7 1057 492 Op 4 37/0.000 + CDS 1032497 - 1032778 364 ## COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K 1058 492 Op 5 38/0.000 + CDS 1032820 - 1033323 637 ## COG0711 F0F1-type ATP synthase, subunit b 1059 492 Op 6 41/0.000 + CDS 1033320 - 1033859 590 ## COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 1060 492 Op 7 42/0.000 + CDS 1033876 - 1035396 1596 ## COG0056 F0F1-type ATP synthase, alpha subunit 1061 492 Op 8 42/0.000 + CDS 1035421 - 1036281 878 ## COG0224 F0F1-type ATP synthase, gamma subunit 1062 492 Op 9 42/0.000 + CDS 1036302 - 1037696 1414 ## COG0055 F0F1-type ATP synthase, beta subunit 1063 492 Op 10 . + CDS 1037709 - 1038110 454 ## COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) + Prom 1038286 - 1038345 7.0 1064 493 Op 1 . + CDS 1038441 - 1040210 211 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 1065 493 Op 2 . + CDS 1040262 - 1040387 144 ## 1066 494 Tu 1 . - CDS 1040393 - 1041685 230 ## COG1373 Predicted ATPase (AAA+ superfamily) - Prom 1041705 - 1041764 4.6 + Prom 1041735 - 1041794 10.0 1067 495 Op 1 7/0.000 + CDS 1042023 - 1043435 1372 ## COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase] 1068 495 Op 2 . + CDS 1043432 - 1045357 2031 ## COG3276 Selenocysteine-specific translation elongation factor + Term 1045418 - 1045476 7.2 + Prom 1045527 - 1045586 3.0 1069 496 Tu 1 . + CDS 1045637 - 1046272 329 ## gi|227874419|ref|ZP_03992600.1| hypothetical protein HMPREF6123_2539 1070 497 Tu 1 . - CDS 1046367 - 1046480 57 ## - Prom 1046507 - 1046566 3.9 + Prom 1046389 - 1046448 11.4 1071 498 Tu 1 . + CDS 1046517 - 1047893 815 ## PROTEIN SUPPORTED gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 + Term 1047933 - 1047986 18.1 1072 499 Op 1 . + CDS 1048600 - 1048998 485 ## Amet_3596 GrdX protein 1073 499 Op 2 . + CDS 1049032 - 1050312 1706 ## Shel_25240 glycine/sarcosine/betaine reductase component B alpha/beta subunit 1074 499 Op 3 . + CDS 1050323 - 1051372 1059 ## Shel_25230 glycine reductase, selenoprotein B 1075 499 Op 4 . + CDS 1051400 - 1051630 211 ## CD2351 glycine reductase complex component B gamma subunit (EC:1.21.4.2) + Term 1051717 - 1051765 10.9 + Prom 1051903 - 1051962 6.2 1076 500 Op 1 11/0.000 + CDS 1052038 - 1052985 561 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 1077 500 Op 2 . + CDS 1053065 - 1053394 411 ## COG0526 Thiol-disulfide isomerase and thioredoxins 1078 500 Op 3 . + CDS 1053460 - 1053591 164 ## Shel_25200 glycine/sarcosine/betaine reductase complex protein A (EC:1.21.4.4) 1079 500 Op 4 . + CDS 1053607 - 1053933 367 ## Shel_25200 glycine/sarcosine/betaine reductase complex protein A (EC:1.21.4.4) + Term 1053940 - 1053973 2.0 + Prom 1054006 - 1054065 6.1 1080 501 Op 1 . + CDS 1054178 - 1055713 1414 ## Shel_25190 hypothetical protein 1081 501 Op 2 . + CDS 1055729 - 1056883 1462 ## Shel_25180 fatty acid/phospholipid biosynthesis enzyme + Prom 1056886 - 1056945 3.6 1082 502 Tu 1 . + CDS 1057075 - 1058184 1120 ## COG3949 Uncharacterized membrane protein + Term 1058200 - 1058247 6.1 + Prom 1058216 - 1058275 5.5 1083 503 Tu 1 . + CDS 1058310 - 1059002 464 ## Tter_0053 peptidase C26 + Prom 1059015 - 1059074 6.4 1084 504 Op 1 . + CDS 1059094 - 1060338 1149 ## COG1301 Na+/H+-dicarboxylate symporters 1085 504 Op 2 . + CDS 1060419 - 1060880 335 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Term 1060951 - 1060994 6.0 + Prom 1060978 - 1061037 10.4 1086 505 Tu 1 . + CDS 1061257 - 1062069 818 ## COG0428 Predicted divalent heavy-metal cations transporter + Term 1062083 - 1062143 1.7 1087 506 Tu 1 . - CDS 1062095 - 1063804 222 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 - Prom 1063884 - 1063943 4.8 - Term 1063981 - 1064023 3.1 1088 507 Tu 1 . - CDS 1064122 - 1064916 587 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - Prom 1064946 - 1065005 3.8 - Term 1064988 - 1065034 5.4 1089 508 Op 1 . - CDS 1065056 - 1066162 780 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 1090 508 Op 2 . - CDS 1066205 - 1066618 403 ## COG1959 Predicted transcriptional regulator - Prom 1066711 - 1066770 3.8 1091 509 Op 1 . + CDS 1066744 - 1066917 162 ## 1092 509 Op 2 . + CDS 1066938 - 1068467 1404 ## COG0433 Predicted ATPase + Term 1068516 - 1068575 11.6 - Term 1068504 - 1068563 11.1 1093 510 Tu 1 . - CDS 1068681 - 1069610 670 ## BL1264 hypothetical protein - Prom 1069702 - 1069761 6.3 + Prom 1069582 - 1069641 7.9 1094 511 Tu 1 . + CDS 1069830 - 1071545 1648 ## COG0608 Single-stranded DNA-specific exonuclease + Prom 1071554 - 1071613 1.6 1095 512 Op 1 . + CDS 1071648 - 1072901 1450 ## COG0112 Glycine/serine hydroxymethyltransferase 1096 512 Op 2 . + CDS 1072949 - 1073578 374 ## Tresu_2165 hypothetical protein + Term 1073656 - 1073713 15.2 - Term 1073652 - 1073692 6.1 1097 513 Tu 1 . - CDS 1073830 - 1074405 555 ## Closa_2116 hypothetical protein - Prom 1074539 - 1074598 7.1 1098 514 Tu 1 . + CDS 1074805 - 1076109 1084 ## COG2873 O-acetylhomoserine sulfhydrylase + Term 1076146 - 1076204 13.6 + Prom 1076176 - 1076235 5.1 1099 515 Op 1 . + CDS 1076264 - 1077034 697 ## COG1385 Uncharacterized protein conserved in bacteria 1100 515 Op 2 . + CDS 1077031 - 1078188 1074 ## COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 1101 515 Op 3 . + CDS 1078248 - 1079339 1092 ## PROTEIN SUPPORTED gi|227872814|ref|ZP_03991128.1| possible ribosomal protein L11 methyltransferase + Prom 1079373 - 1079432 3.3 1102 516 Tu 1 . + CDS 1079452 - 1079946 497 ## COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family + Term 1079964 - 1080005 3.5 - Term 1079954 - 1079991 1.1 1103 517 Tu 1 . - CDS 1080022 - 1081224 1057 ## COG0301 Thiamine biosynthesis ATP pyrophosphatase - Prom 1081285 - 1081344 4.0 - Term 1081283 - 1081323 3.1 1104 518 Tu 1 . - CDS 1081367 - 1081609 426 ## Closa_0890 Phosphotransferase system, phosphocarrier protein HPr - Prom 1081731 - 1081790 6.4 + Prom 1081613 - 1081672 4.8 1105 519 Tu 1 . + CDS 1081768 - 1083153 409 ## PROTEIN SUPPORTED gi|228000795|ref|ZP_04047796.1| SSU ribosomal protein S12P methylthiotransferase + Term 1083181 - 1083231 4.2 + Prom 1083173 - 1083232 6.0 1106 520 Op 1 21/0.000 + CDS 1083292 - 1084314 955 ## COG1420 Transcriptional regulator of heat shock gene 1107 520 Op 2 29/0.000 + CDS 1084327 - 1085007 584 ## COG0576 Molecular chaperone GrpE (heat shock protein) + Prom 1085087 - 1085146 3.5 1108 520 Op 3 31/0.000 + CDS 1085166 - 1087040 2351 ## COG0443 Molecular chaperone + Term 1087091 - 1087137 14.5 1109 521 Tu 1 . + CDS 1087250 - 1088374 1049 ## COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain + Term 1088399 - 1088433 2.0 + Prom 1088425 - 1088484 14.8 1110 522 Op 1 . + CDS 1088585 - 1090717 2020 ## COG0840 Methyl-accepting chemotaxis protein + Prom 1090751 - 1090810 5.9 1111 522 Op 2 . + CDS 1090935 - 1092539 1701 ## COG1866 Phosphoenolpyruvate carboxykinase (ATP) + Term 1092571 - 1092620 14.2 + Prom 1092728 - 1092787 6.0 1112 523 Tu 1 . + CDS 1093011 - 1094255 916 ## COG1316 Transcriptional regulator + Term 1094284 - 1094321 5.1 + TRNA 1094316 - 1094387 63.1 # Gln CTG 0 0 - Term 1094774 - 1094809 6.5 1113 524 Tu 1 . - CDS 1094835 - 1095572 706 ## COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase - Prom 1095715 - 1095774 3.9 + Prom 1095698 - 1095757 5.7 1114 525 Op 1 . + CDS 1095782 - 1096576 655 ## COG5263 FOG: Glucan-binding domain (YG repeat) 1115 525 Op 2 . + CDS 1096573 - 1097505 945 ## COG0583 Transcriptional regulator + Prom 1097508 - 1097567 3.1 1116 526 Op 1 . + CDS 1097607 - 1098104 377 ## Closa_2169 PTS system, N-acetylglucosamine-specific IIBC subunit 1117 526 Op 2 5/0.019 + CDS 1098118 - 1098678 545 ## COG0534 Na+-driven multidrug efflux pump 1118 526 Op 3 . + CDS 1098705 - 1099484 571 ## COG0534 Na+-driven multidrug efflux pump 1119 526 Op 4 . + CDS 1099481 - 1100923 1347 ## COG1488 Nicotinic acid phosphoribosyltransferase + Prom 1100986 - 1101045 6.2 1120 527 Op 1 . + CDS 1101071 - 1104316 3214 ## COG0060 Isoleucyl-tRNA synthetase 1121 527 Op 2 . + CDS 1104350 - 1106803 2698 ## COG0058 Glucan phosphorylase 1122 527 Op 3 . + CDS 1106814 - 1107542 491 ## gi|227872777|ref|ZP_03991097.1| hypothetical protein HMPREF6123_1036 1123 527 Op 4 . + CDS 1107526 - 1107675 173 ## 1124 527 Op 5 . + CDS 1107688 - 1108170 310 ## COG4767 Glycopeptide antibiotics resistance protein 1125 527 Op 6 . + CDS 1108247 - 1108513 159 ## + Term 1108532 - 1108570 -0.7 1126 527 Op 7 . + CDS 1108580 - 1109383 284 ## gi|227872773|ref|ZP_03991093.1| hypothetical protein HMPREF6123_1032 1127 527 Op 8 . + CDS 1109465 - 1110877 1212 ## COG1686 D-alanyl-D-alanine carboxypeptidase 1128 527 Op 9 . + CDS 1110778 - 1112031 714 ## gi|227872771|ref|ZP_03991091.1| hypothetical protein HMPREF6123_1030 1129 527 Op 10 . + CDS 1112085 - 1112912 856 ## COG0253 Diaminopimelate epimerase + Term 1113092 - 1113135 1.7 1130 528 Op 1 . - CDS 1113195 - 1113830 826 ## COG0274 Deoxyribose-phosphate aldolase 1131 528 Op 2 . - CDS 1113817 - 1118319 3740 ## COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) - Prom 1118341 - 1118400 5.6 + Prom 1118374 - 1118433 6.1 1132 529 Tu 1 . + CDS 1118471 - 1119094 655 ## gi|291166016|gb|EFE28063.1| hypothetical protein HMPREF0389_01316 + Term 1119245 - 1119280 -1.0 + Prom 1119209 - 1119268 7.0 1133 530 Op 1 . + CDS 1119352 - 1120008 737 ## Closa_0669 hypothetical protein + Prom 1120016 - 1120075 2.7 1134 530 Op 2 . + CDS 1120097 - 1121530 1694 ## COG0469 Pyruvate kinase + Term 1121618 - 1121658 -1.0 + Prom 1121538 - 1121597 7.2 1135 531 Op 1 . + CDS 1121711 - 1123018 1154 ## COG0019 Diaminopimelate decarboxylase 1136 531 Op 2 13/0.000 + CDS 1123052 - 1124371 1088 ## COG0124 Histidyl-tRNA synthetase + Prom 1124457 - 1124516 9.0 1137 531 Op 3 . + CDS 1124549 - 1126354 1862 ## COG0173 Aspartyl-tRNA synthetase 1138 531 Op 4 . + CDS 1126347 - 1126994 409 ## Closa_0686 hypothetical protein + Term 1127045 - 1127088 8.2 + Prom 1127003 - 1127062 1.9 1139 532 Op 1 . + CDS 1127108 - 1128262 891 ## COG0116 Predicted N6-adenine-specific DNA methylase 1140 532 Op 2 . + CDS 1128272 - 1129465 1048 ## COG0127 Xanthosine triphosphate pyrophosphatase + Term 1129588 - 1129654 30.0 + TRNA 1129570 - 1129643 81.4 # Arg TCT 0 0 + TRNA 1129662 - 1129735 71.8 # His GTG 0 0 + TRNA 1129813 - 1129884 71.5 # Gln TTG 0 0 + TRNA 1129889 - 1129961 81.5 # Lys TTT 0 0 + TRNA 1129983 - 1130062 67.5 # Leu TAG 0 0 + Prom 1129988 - 1130047 80.4 1141 533 Op 1 . + CDS 1130271 - 1130972 855 ## COG0813 Purine-nucleoside phosphorylase 1142 533 Op 2 . + CDS 1131002 - 1131778 833 ## COG2820 Uridine phosphorylase 1143 533 Op 3 . + CDS 1131837 - 1133033 911 ## COG1015 Phosphopentomutase 1144 533 Op 4 . + CDS 1133073 - 1133570 380 ## COG0590 Cytosine/adenosine deaminases 1145 533 Op 5 . + CDS 1133601 - 1134362 606 ## COG1564 Thiamine pyrophosphokinase + Term 1134392 - 1134422 1.8 + Prom 1134724 - 1134783 8.0 1146 534 Tu 1 . + CDS 1134803 - 1136047 971 ## COG0628 Predicted permease + Prom 1136070 - 1136129 3.3 1147 535 Op 1 . + CDS 1136244 - 1136792 655 ## COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) 1148 535 Op 2 . + CDS 1136785 - 1137663 828 ## COG1281 Disulfide bond chaperones of the HSP33 family + Term 1137750 - 1137785 0.4 + Prom 1137691 - 1137750 7.1 1149 536 Tu 1 . + CDS 1137796 - 1137993 273 ## COG1278 Cold shock proteins + Term 1138191 - 1138232 4.5 + Prom 1138192 - 1138251 5.8 1150 537 Tu 1 . + CDS 1138290 - 1138802 478 ## COG4769 Predicted membrane protein + Prom 1138883 - 1138942 3.5 1151 538 Op 1 . + CDS 1138973 - 1141819 2654 ## COG0178 Excinuclease ATPase subunit + Prom 1141835 - 1141894 2.6 1152 538 Op 2 . + CDS 1141914 - 1142333 454 ## COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 1153 538 Op 3 . + CDS 1142326 - 1143402 921 ## COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase 1154 538 Op 4 . + CDS 1143424 - 1144116 869 ## COG0775 Nucleoside phosphorylase + Term 1144191 - 1144233 -0.6 + Prom 1144238 - 1144297 6.5 1155 539 Tu 1 . + CDS 1144364 - 1145701 1684 ## COG0166 Glucose-6-phosphate isomerase + Term 1145741 - 1145775 -0.7 1156 540 Tu 1 . - CDS 1145855 - 1146118 275 ## Cphy_0044 hypothetical protein - Prom 1146248 - 1146307 7.2 + Prom 1146291 - 1146350 5.1 1157 541 Tu 1 . + CDS 1146412 - 1147512 1074 ## Closa_0068 hypothetical protein + Term 1147572 - 1147619 2.0 + Prom 1147752 - 1147811 4.0 1158 542 Op 1 7/0.000 + CDS 1147857 - 1149086 1038 ## PROTEIN SUPPORTED gi|149002994|ref|ZP_01827905.1| 50S ribosomal protein L33 1159 542 Op 2 8/0.000 + CDS 1149120 - 1150112 986 ## COG0078 Ornithine carbamoyltransferase 1160 542 Op 3 3/0.029 + CDS 1150122 - 1151060 938 ## COG0549 Carbamate kinase 1161 542 Op 4 . + CDS 1151083 - 1152588 1886 ## COG1288 Predicted membrane protein + Term 1152618 - 1152655 6.4 + Prom 1152635 - 1152694 8.8 1162 543 Tu 1 . + CDS 1152814 - 1154121 1158 ## COG2207 AraC-type DNA-binding domain-containing proteins + Term 1154129 - 1154160 4.1 - Term 1154117 - 1154148 4.1 1163 544 Tu 1 . - CDS 1154153 - 1155613 744 ## Closa_0117 hypothetical protein - Prom 1155675 - 1155734 3.6 - Term 1155906 - 1155945 4.6 1164 545 Op 1 . - CDS 1156090 - 1157145 797 ## Closa_0118 metallophosphoesterase 1165 545 Op 2 . - CDS 1157160 - 1158548 1238 ## COG0017 Aspartyl/asparaginyl-tRNA synthetases - Prom 1158763 - 1158822 10.2 + Prom 1158745 - 1158804 10.2 1166 546 Op 1 . + CDS 1158880 - 1160361 1054 ## COG4690 Dipeptidase 1167 546 Op 2 . + CDS 1160424 - 1161632 1147 ## COG5505 Predicted integral membrane protein + Term 1161689 - 1161757 15.3 + Prom 1161918 - 1161977 7.8 1168 547 Op 1 7/0.000 + CDS 1162067 - 1163341 856 ## COG0448 ADP-glucose pyrophosphorylase 1169 547 Op 2 . + CDS 1163338 - 1164459 1056 ## COG0448 ADP-glucose pyrophosphorylase 1170 547 Op 3 . + CDS 1164475 - 1164750 345 ## COG2088 Uncharacterized protein, involved in the regulation of septum location + Term 1164853 - 1164908 13.7 + Prom 1164880 - 1164939 5.3 1171 548 Op 1 1/0.105 + CDS 1164991 - 1167867 2176 ## COG0642 Signal transduction histidine kinase 1172 548 Op 2 . + CDS 1167908 - 1168636 617 ## COG3279 Response regulator of the LytR/AlgR family 1173 548 Op 3 . + CDS 1168650 - 1169975 1216 ## COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain + Term 1170070 - 1170111 7.1 - Term 1169927 - 1169983 4.2 1174 549 Tu 1 . - CDS 1170007 - 1170795 666 ## Closa_3855 hypothetical protein - Prom 1170825 - 1170884 7.8 1175 550 Tu 1 . - CDS 1170906 - 1171013 91 ## - Prom 1171066 - 1171125 1.6 + Prom 1170852 - 1170911 10.9 1176 551 Tu 1 . + CDS 1170979 - 1173276 2458 ## COG0840 Methyl-accepting chemotaxis protein + Term 1173330 - 1173391 16.4 + TRNA 1173615 - 1173685 68.2 # Gly TCC 0 0 + TRNA 1173691 - 1173763 80.5 # Phe GAA 0 0 + TRNA 1173768 - 1173839 67.4 # Gly GCC 0 0 + TRNA 1173983 - 1174071 65.8 # Ser TGA 0 0 + TRNA 1174210 - 1174292 48.8 # Leu CAG 0 0 1177 552 Op 1 . + CDS 1174310 - 1174414 103 ## 1178 552 Op 2 . + CDS 1174424 - 1175449 576 ## COG0021 Transketolase 1179 552 Op 3 13/0.000 + CDS 1175446 - 1176405 583 ## COG0021 Transketolase 1180 552 Op 4 . + CDS 1176460 - 1177116 700 ## COG0176 Transaldolase + Prom 1177122 - 1177181 6.7 1181 553 Op 1 . + CDS 1177211 - 1177840 497 ## COG2344 AT-rich DNA-binding protein 1182 553 Op 2 1/0.105 + CDS 1177843 - 1179192 267 ## PROTEIN SUPPORTED gi|225093729|ref|YP_002662469.1| ribosomal protein S15 1183 553 Op 3 . + CDS 1179170 - 1179610 284 ## COG0787 Alanine racemase 1184 553 Op 4 . + CDS 1179574 - 1180368 517 ## COG0787 Alanine racemase 1185 553 Op 5 . + CDS 1180446 - 1181186 975 ## COG0217 Uncharacterized conserved protein + Term 1181190 - 1181232 12.6 1186 554 Tu 1 . - CDS 1181203 - 1183008 1236 ## COG1293 Predicted RNA-binding protein homologous to eukaryotic snRNP - Prom 1183043 - 1183102 6.2 + Prom 1183002 - 1183061 7.4 1187 555 Op 1 8/0.000 + CDS 1183143 - 1184012 677 ## COG1561 Uncharacterized stress-induced protein 1188 555 Op 2 . + CDS 1184024 - 1184662 590 ## COG0194 Guanylate kinase 1189 555 Op 3 . + CDS 1184643 - 1185065 611 ## gi|227872688|ref|ZP_03991018.1| DNA-directed RNA polymerase 1190 555 Op 4 2/0.038 + CDS 1185065 - 1186336 918 ## PROTEIN SUPPORTED gi|229230948|ref|ZP_04355465.1| SSU ribosomal protein S12P methylthiotransferase 1191 555 Op 5 6/0.010 + CDS 1186320 - 1186862 373 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase 1192 555 Op 6 . + CDS 1186862 - 1187380 287 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase 1193 555 Op 7 . + CDS 1187380 - 1187670 177 ## gi|227872684|ref|ZP_03991014.1| hypothetical protein HMPREF6123_0953 1194 555 Op 8 . + CDS 1187655 - 1187921 211 ## 1195 555 Op 9 . + CDS 1187918 - 1188340 298 ## EUBELI_00953 hypothetical protein 1196 555 Op 10 . + CDS 1188330 - 1188854 566 ## COG3874 Uncharacterized conserved protein + Prom 1188889 - 1188948 4.1 1197 556 Tu 1 . + CDS 1188977 - 1189210 383 ## PROTEIN SUPPORTED gi|227872680|ref|ZP_03991010.1| possible ribosomal protein L28 + Term 1189220 - 1189262 3.9 + Prom 1189234 - 1189293 7.7 1198 557 Op 1 8/0.000 + CDS 1189352 - 1189714 378 ## COG1725 Predicted transcriptional regulators 1199 557 Op 2 . + CDS 1189701 - 1190399 256 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 1200 557 Op 3 . + CDS 1190401 - 1191156 575 ## gi|227872678|ref|ZP_03991008.1| conserved hypothetical protein + Term 1191192 - 1191235 9.6 + Prom 1191217 - 1191276 4.6 1201 558 Op 1 9/0.000 + CDS 1191303 - 1191662 423 ## COG1302 Uncharacterized protein conserved in bacteria 1202 558 Op 2 4/0.029 + CDS 1191679 - 1193358 1674 ## COG1461 Predicted kinase related to dihydroxyacetone kinase 1203 558 Op 3 1/0.105 + CDS 1193417 - 1195438 1290 ## COG1200 RecG-like helicase 1204 558 Op 4 14/0.000 + CDS 1195466 - 1196014 529 ## COG0742 N6-adenine-specific methylase 1205 558 Op 5 . + CDS 1196070 - 1196549 401 ## PROTEIN SUPPORTED gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 1206 558 Op 6 . + CDS 1196565 - 1197131 723 ## Closa_1966 hypothetical protein + Term 1197158 - 1197200 -1.0 + TRNA 1197347 - 1197420 79.4 # Pro CGG 0 0 + Prom 1197348 - 1197407 78.0 1207 559 Op 1 . + CDS 1197503 - 1198855 1255 ## COG0733 Na+-dependent transporters of the SNF family 1208 559 Op 2 3/0.029 + CDS 1198885 - 1199919 848 ## COG0232 dGTP triphosphohydrolase 1209 559 Op 3 . + CDS 1199931 - 1201313 1094 ## COG0358 DNA primase (bacterial type) 1210 559 Op 4 . + CDS 1201313 - 1201666 231 ## gi|227872668|ref|ZP_03990998.1| possible DNA primase 1211 559 Op 5 9/0.000 + CDS 1201707 - 1202369 474 ## COG2384 Predicted SAM-dependent methyltransferase 1212 559 Op 6 . + CDS 1202372 - 1203157 639 ## COG0327 Uncharacterized conserved protein 1213 560 Tu 1 . + CDS 1203274 - 1204929 658 ## PROTEIN SUPPORTED gi|39938628|ref|NP_950394.1| ribosomal protein L13 + Term 1205111 - 1205155 1.0 1214 561 Tu 1 . - CDS 1205145 - 1206293 670 ## COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control - Prom 1206396 - 1206455 6.3 1215 562 Tu 1 . + CDS 1206505 - 1206633 114 ## + Term 1206730 - 1206765 -1.0 - Term 1206547 - 1206573 -1.0 1216 563 Op 1 . - CDS 1206766 - 1208025 1145 ## COG0038 Chloride channel protein EriC 1217 563 Op 2 . - CDS 1208029 - 1208904 887 ## COG1940 Transcriptional regulator/sugar kinase - Prom 1208991 - 1209050 6.5 + Prom 1209071 - 1209130 8.1 1218 564 Op 1 . + CDS 1209166 - 1211202 1581 ## COG0366 Glycosidases + Term 1211206 - 1211243 -0.5 + Prom 1211275 - 1211334 1.8 1219 564 Op 2 . + CDS 1211393 - 1212964 1166 ## COG1158 Transcription termination factor 1220 565 Op 1 . + CDS 1213071 - 1213487 545 ## EUBREC_1854 hypothetical protein 1221 565 Op 2 . + CDS 1213573 - 1214133 400 ## LDBND_1728 RNA polymerase sigma factor (ecf subfamily) 1222 565 Op 3 . + CDS 1214130 - 1215098 1036 ## LBUL_1746 hypothetical protein + Prom 1215102 - 1215161 4.0 1223 566 Op 1 . + CDS 1215278 - 1215751 421 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) 1224 566 Op 2 . + CDS 1215748 - 1217751 2000 ## COG5009 Membrane carboxypeptidase/penicillin-binding protein 1225 566 Op 3 1/0.105 + CDS 1217755 - 1218384 460 ## COG1739 Uncharacterized conserved protein 1226 566 Op 4 . + CDS 1218462 - 1220294 1972 ## COG1217 Predicted membrane GTPase involved in stress response 1227 566 Op 5 6/0.010 + CDS 1220355 - 1221242 1060 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase + Term 1221258 - 1221320 -0.5 1228 566 Op 6 . + CDS 1221341 - 1222096 735 ## COG0289 Dihydrodipicolinate reductase 1229 566 Op 7 . + CDS 1222153 - 1223589 1294 ## COG0015 Adenylosuccinate lyase 1230 566 Op 8 . + CDS 1223649 - 1223849 181 ## + Term 1223860 - 1223905 0.5 1231 567 Op 1 . + CDS 1223928 - 1225214 1481 ## COG0104 Adenylosuccinate synthase 1232 567 Op 2 . + CDS 1225227 - 1226579 991 ## EUBELI_00863 hypothetical protein 1233 567 Op 3 . + CDS 1226582 - 1227403 773 ## EUBELI_00864 hypothetical protein + Term 1227462 - 1227510 11.0 + Prom 1227458 - 1227517 6.4 1234 568 Op 1 9/0.000 + CDS 1227655 - 1229922 2803 ## COG0620 Methionine synthase II (cobalamin-independent) 1235 568 Op 2 . + CDS 1229909 - 1230811 591 ## COG0685 5,10-methylenetetrahydrofolate reductase 1236 569 Tu 1 . - CDS 1230808 - 1231893 822 ## COG0287 Prephenate dehydrogenase - Prom 1232032 - 1232091 5.2 + Prom 1232005 - 1232064 3.6 1237 570 Tu 1 . + CDS 1232126 - 1232683 623 ## COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) + Term 1232746 - 1232777 1.0 1238 571 Op 1 . + CDS 1232803 - 1234605 2072 ## COG0018 Arginyl-tRNA synthetase 1239 571 Op 2 . + CDS 1234622 - 1235161 629 ## COG0622 Predicted phosphoesterase + Prom 1235857 - 1235916 8.8 1240 572 Tu 1 . + CDS 1235985 - 1237082 1044 ## COG0371 Glycerol dehydrogenase and related enzymes + Term 1237106 - 1237152 13.6 + Prom 1237135 - 1237194 4.2 1241 573 Tu 1 . + CDS 1237308 - 1237763 281 ## COG1943 Transposase and inactivated derivatives + Prom 1238052 - 1238111 4.0 1242 574 Tu 1 . + CDS 1238178 - 1239719 1381 ## COG0519 GMP synthase, PP-ATPase domain/subunit + Term 1239720 - 1239751 1.1 + Prom 1240054 - 1240113 4.6 1243 575 Tu 1 . + CDS 1240146 - 1240916 239 ## Spea_2956 hypothetical protein + Term 1240989 - 1241017 1.0 + Prom 1240995 - 1241054 3.8 1244 576 Tu 1 . + CDS 1241088 - 1241348 117 ## gi|331003281|ref|ZP_08326785.1| hypothetical protein HMPREF0491_01647 + Term 1241390 - 1241423 -0.8 + Prom 1241504 - 1241563 4.3 1245 577 Op 1 . + CDS 1241739 - 1241873 133 ## gi|227872992|ref|ZP_03991289.1| hypothetical protein HMPREF6123_1228 1246 577 Op 2 . + CDS 1241854 - 1242384 344 ## COG2110 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 1247 577 Op 3 . + CDS 1242384 - 1243349 497 ## gi|315653823|ref|ZP_07906739.1| conserved hypothetical protein 1248 577 Op 4 . + CDS 1243384 - 1243524 154 ## gi|227873220|ref|ZP_03991493.1| hypothetical protein HMPREF6123_1432 + Term 1243539 - 1243580 8.8 + Prom 1243716 - 1243775 5.5 1249 578 Op 1 . + CDS 1243916 - 1244041 82 ## 1250 578 Op 2 . + CDS 1244002 - 1244739 369 ## COG3436 Transposase and inactivated derivatives 1251 579 Tu 1 . + CDS 1245185 - 1245343 123 ## + Prom 1245441 - 1245500 5.2 1252 580 Op 1 . + CDS 1245522 - 1247402 771 ## COG5635 Predicted NTPase (NACHT family) 1253 580 Op 2 . + CDS 1247447 - 1248100 177 ## + Term 1248307 - 1248342 -0.3 + Prom 1248340 - 1248399 2.5 1254 581 Op 1 . + CDS 1248456 - 1248518 63 ## 1255 581 Op 2 . + CDS 1248554 - 1248760 135 ## Closa_3160 transposase + Prom 1249225 - 1249284 4.1 1256 582 Tu 1 . + CDS 1249345 - 1249614 153 ## EUBELI_01771 hypothetical protein + Prom 1249676 - 1249735 9.6 1257 583 Op 1 . + CDS 1249761 - 1250429 178 ## COG0338 Site-specific DNA methylase 1258 583 Op 2 . + CDS 1250450 - 1250593 174 ## EUBELI_01770 DNA adenine methylase 1259 583 Op 3 . + CDS 1250609 - 1251421 318 ## COG0863 DNA modification methylase 1260 583 Op 4 . + CDS 1251402 - 1252265 406 ## EUBELI_01767 type II restriction enzyme + Prom 1252324 - 1252383 6.0 1261 584 Tu 1 . + CDS 1252483 - 1255476 1057 ## COG1061 DNA or RNA helicases of superfamily II + Prom 1255666 - 1255725 3.9 1262 585 Op 1 . + CDS 1255773 - 1256132 159 ## COG4679 Phage-related protein 1263 585 Op 2 . + CDS 1256125 - 1256424 359 ## EUBREC_3010 hypothetical protein + Prom 1256569 - 1256628 8.7 1264 586 Op 1 . + CDS 1256754 - 1257578 568 ## Vpar_1721 hypothetical protein 1265 586 Op 2 . + CDS 1257629 - 1258741 595 ## COG2461 Uncharacterized conserved protein + Prom 1258765 - 1258824 2.7 1266 587 Tu 1 . + CDS 1258845 - 1259393 215 ## PROTEIN SUPPORTED gi|229236145|ref|ZP_04360568.1| acetyltransferase, ribosomal protein N-acetylase 1267 588 Tu 1 . - CDS 1259530 - 1260396 904 ## Rumal_2536 hypothetical protein - Prom 1260449 - 1260508 8.4 + Prom 1260720 - 1260779 6.5 1268 589 Op 1 . + CDS 1260808 - 1260927 80 ## 1269 589 Op 2 . + CDS 1260887 - 1261882 691 ## COG3177 Uncharacterized conserved protein + Term 1261929 - 1261984 7.1 - Term 1261925 - 1261961 5.5 1270 590 Tu 1 . - CDS 1262042 - 1262509 282 ## Cphy_1020 hypothetical protein - Prom 1262534 - 1262593 6.9 + Prom 1263406 - 1263465 9.5 1271 591 Op 1 . + CDS 1263506 - 1265278 653 ## COG2972 Predicted signal transduction protein with a C-terminal ATPase domain + Prom 1265304 - 1265363 4.0 1272 591 Op 2 . + CDS 1265445 - 1266842 489 ## COG2207 AraC-type DNA-binding domain-containing proteins + Prom 1266844 - 1266903 4.6 1273 592 Op 1 . + CDS 1267009 - 1268373 853 ## COG1653 ABC-type sugar transport system, periplasmic component 1274 592 Op 2 . + CDS 1268405 - 1268836 182 ## Pjdr2_3837 binding-protein-dependent transport systems inner membrane component 1275 592 Op 3 38/0.000 + CDS 1268848 - 1269351 94 ## COG1175 ABC-type sugar transport systems, permease components 1276 592 Op 4 . + CDS 1269348 - 1269887 121 ## COG0395 ABC-type sugar transport system, permease component 1277 592 Op 5 . + CDS 1269938 - 1270159 77 ## Pjdr2_3838 binding-protein-dependent transport systems inner membrane component + Prom 1270431 - 1270490 4.9 1278 593 Op 1 . + CDS 1270533 - 1270814 214 ## 1279 593 Op 2 . + CDS 1270853 - 1271608 292 ## COG5434 Endopolygalacturonase + Term 1271669 - 1271697 -0.9 1280 594 Tu 1 . - CDS 1271861 - 1271944 56 ## - Prom 1272027 - 1272086 7.9 + Prom 1272244 - 1272303 3.6 1281 595 Op 1 . + CDS 1272343 - 1273206 88 ## Pjdr2_2569 Endopygalactorunase-like protein 1282 595 Op 2 . + CDS 1273203 - 1273613 157 ## BBR47_17720 extracellular serine protease precursor (EC:3.4.21.-) 1283 595 Op 3 . + CDS 1273558 - 1274442 519 ## SpiBuddy_1577 glycoside hydrolase family 43 + Term 1274496 - 1274536 1.2 + Prom 1274503 - 1274562 6.1 1284 596 Tu 1 . + CDS 1274671 - 1275981 725 ## COG0366 Glycosidases + Prom 1276006 - 1276065 3.0 1285 597 Op 1 . + CDS 1276091 - 1276879 635 ## COG0561 Predicted hydrolases of the HAD superfamily 1286 597 Op 2 . + CDS 1276876 - 1277517 520 ## COG2039 Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) + Prom 1277522 - 1277581 4.1 1287 598 Tu 1 . + CDS 1277662 - 1278960 945 ## COG2966 Uncharacterized conserved protein + Term 1279122 - 1279164 -1.0 1288 599 Tu 1 . - CDS 1279053 - 1279553 399 ## COG2426 Predicted membrane protein - Prom 1279719 - 1279778 5.4 + Prom 1279549 - 1279608 5.7 1289 600 Op 1 . + CDS 1279726 - 1279878 228 ## 1290 600 Op 2 . + CDS 1279875 - 1280834 728 ## Closa_1558 TPR repeat-containing protein 1291 600 Op 3 . + CDS 1280774 - 1281175 346 ## gi|227872617|ref|ZP_03990951.1| conserved hypothetical protein 1292 600 Op 4 . + CDS 1281175 - 1281840 685 ## EUBELI_01628 hypothetical protein 1293 600 Op 5 . + CDS 1281850 - 1282737 664 ## Cphy_3552 hypothetical protein 1294 600 Op 6 . + CDS 1282770 - 1283615 798 ## COG1624 Uncharacterized conserved protein 1295 600 Op 7 . + CDS 1283612 - 1284766 1097 ## Closa_1249 YbbR family protein 1296 600 Op 8 . + CDS 1284763 - 1286076 596 ## Closa_1252 hypothetical protein 1297 600 Op 9 . + CDS 1286073 - 1287173 917 ## COG0628 Predicted permease 1298 600 Op 10 . + CDS 1287191 - 1288606 945 ## COG0144 tRNA and rRNA cytosine-C5-methylases + Prom 1288663 - 1288722 6.5 1299 601 Op 1 . + CDS 1288761 - 1290125 1032 ## COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) 1300 601 Op 2 . + CDS 1290137 - 1290736 419 ## Closa_1325 sodium pump decarboxylase gamma subunit 1301 601 Op 3 . + CDS 1290679 - 1290942 246 ## gi|227872607|ref|ZP_03990942.1| conserved hypothetical protein 1302 601 Op 4 . + CDS 1290952 - 1291329 512 ## COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit 1303 601 Op 5 4/0.029 + CDS 1291349 - 1292497 1210 ## COG1883 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit 1304 601 Op 6 . + CDS 1292511 - 1293908 1680 ## COG5016 Pyruvate/oxaloacetate carboxyltransferase + Term 1293914 - 1293962 13.4 - Term 1293900 - 1293950 10.0 1305 602 Tu 1 . - CDS 1294008 - 1294121 121 ## - Prom 1294238 - 1294297 7.2 + Prom 1294046 - 1294105 7.5 1306 603 Op 1 . + CDS 1294185 - 1295879 1416 ## COG4193 Beta- N-acetylglucosaminidase 1307 603 Op 2 . + CDS 1295895 - 1297130 1200 ## Closa_1330 cellulosome anchoring protein cohesin region + Term 1297137 - 1297174 5.5 1308 604 Op 1 . + CDS 1297215 - 1297373 101 ## 1309 604 Op 2 6/0.010 + CDS 1297378 - 1299834 2293 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 1310 604 Op 3 . + CDS 1299837 - 1301210 964 ## COG1066 Predicted ATP-dependent serine protease + TRNA 1301240 - 1301310 57.1 # Trp CCA 0 0 + Prom 1301238 - 1301297 75.2 1311 605 Op 1 . + CDS 1301474 - 1302334 709 ## COG1284 Uncharacterized conserved protein + Prom 1302357 - 1302416 2.3 1312 605 Op 2 . + CDS 1302463 - 1302873 307 ## COG0546 Predicted phosphatases 1313 605 Op 3 . + CDS 1302951 - 1303100 229 ## gi|227872520|ref|ZP_03990858.1| 5'-nucleotidase 1314 605 Op 4 21/0.000 + CDS 1303171 - 1304229 1294 ## COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 1315 605 Op 5 . + CDS 1304237 - 1304980 354 ## COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 1316 605 Op 6 . + CDS 1304980 - 1305576 426 ## COG1131 ABC-type multidrug transport system, ATPase component + Prom 1305643 - 1305702 6.8 1317 606 Op 1 . + CDS 1305725 - 1305823 164 ## + Term 1305844 - 1305881 9.1 1318 606 Op 2 32/0.000 + CDS 1305896 - 1307542 1663 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 1319 606 Op 3 15/0.000 + CDS 1307552 - 1307803 319 ## COG0440 Acetolactate synthase, small (regulatory) subunit + Prom 1307827 - 1307886 2.1 1320 606 Op 4 1/0.105 + CDS 1308041 - 1309054 1053 ## COG0059 Ketol-acid reductoisomerase 1321 606 Op 5 . + CDS 1309072 - 1310268 1164 ## COG1171 Threonine dehydratase 1322 606 Op 6 . + CDS 1310279 - 1311373 968 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 1323 606 Op 7 32/0.000 + CDS 1311358 - 1311939 512 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 1324 606 Op 8 . + CDS 1311939 - 1312430 412 ## COG0440 Acetolactate synthase, small (regulatory) subunit 1325 606 Op 9 . + CDS 1312516 - 1312884 340 ## COG0251 Putative translation initiation inhibitor, yjgF family 1326 606 Op 10 . + CDS 1312885 - 1313340 409 ## SGO_0380 hypothetical protein 1327 606 Op 11 . + CDS 1313337 - 1313969 564 ## COG2323 Predicted membrane protein 1328 606 Op 12 . + CDS 1313984 - 1316164 1701 ## COG5263 FOG: Glucan-binding domain (YG repeat) 1329 606 Op 13 . + CDS 1316166 - 1316348 217 ## + Term 1316355 - 1316405 11.1 - Term 1316341 - 1316393 1.2 1330 607 Tu 1 . - CDS 1316483 - 1317058 634 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins - Prom 1317198 - 1317257 11.1 + Prom 1317186 - 1317245 5.2 1331 608 Tu 1 . + CDS 1317310 - 1317843 554 ## gi|227872500|ref|ZP_03990839.1| hypothetical protein HMPREF6123_0778 + Term 1317911 - 1317945 -0.6 1332 609 Op 1 . - CDS 1317851 - 1319143 758 ## COG0285 Folylpolyglutamate synthase 1333 609 Op 2 . - CDS 1319140 - 1319658 430 ## Closa_1139 hypothetical protein - Prom 1319690 - 1319749 6.7 + Prom 1319716 - 1319775 5.2 1334 610 Op 1 23/0.000 + CDS 1319895 - 1320260 216 ## COG1380 Putative effector of murein hydrolase LrgA 1335 610 Op 2 . + CDS 1320257 - 1320952 467 ## COG1346 Putative effector of murein hydrolase 1336 610 Op 3 . + CDS 1321021 - 1322154 919 ## COG2866 Predicted carboxypeptidase 1337 610 Op 4 . + CDS 1322168 - 1322278 87 ## + Prom 1322298 - 1322357 3.5 1338 611 Op 1 . + CDS 1322383 - 1324074 1576 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases 1339 611 Op 2 . + CDS 1324108 - 1324467 514 ## gi|227872492|ref|ZP_03990831.1| conserved hypothetical protein 1340 612 Tu 1 . + CDS 1324618 - 1325097 414 ## COG1854 LuxS protein involved in autoinducer AI2 synthesis + Term 1325162 - 1325202 2.8 + Prom 1325158 - 1325217 2.5 1341 613 Tu 1 . + CDS 1325247 - 1326440 908 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase + Term 1326459 - 1326504 4.2 - Term 1326447 - 1326492 3.6 1342 614 Tu 1 . - CDS 1326588 - 1327025 304 ## Closa_0416 cell wall binding repeat-containing protein - Term 1327081 - 1327119 7.2 1343 615 Tu 1 . - CDS 1327162 - 1327554 487 ## COG5263 FOG: Glucan-binding domain (YG repeat) - Prom 1327641 - 1327700 6.4 + Prom 1327605 - 1327664 9.2 1344 616 Op 1 41/0.000 + CDS 1327860 - 1328147 459 ## COG0234 Co-chaperonin GroES (HSP10) 1345 616 Op 2 . + CDS 1328198 - 1329823 1562 ## PROTEIN SUPPORTED gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 1346 616 Op 3 . + CDS 1329863 - 1330033 167 ## 1347 616 Op 4 . + CDS 1330063 - 1330347 289 ## gi|227872481|ref|ZP_03990821.1| hypothetical protein HMPREF6123_0760 1348 616 Op 5 . + CDS 1330396 - 1332450 1306 ## COG0171 NAD synthase + Term 1332542 - 1332573 0.1 + Prom 1332476 - 1332535 7.6 1349 617 Op 1 . + CDS 1332594 - 1332689 152 ## 1350 617 Op 2 . + CDS 1332704 - 1333357 232 ## PROTEIN SUPPORTED gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 + Prom 1333363 - 1333422 2.7 1351 618 Op 1 . + CDS 1333461 - 1333739 231 ## 1352 618 Op 2 . + CDS 1333760 - 1334917 1462 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 1353 618 Op 3 . + CDS 1334923 - 1335582 225 ## COG1636 Uncharacterized protein conserved in bacteria 1354 618 Op 4 . + CDS 1335645 - 1335935 318 ## COG1925 Phosphotransferase system, HPr-related proteins + Term 1336052 - 1336107 6.6 - Term 1336040 - 1336095 6.6 1355 619 Op 1 . - CDS 1336135 - 1336992 600 ## COG0489 ATPases involved in chromosome partitioning 1356 619 Op 2 . - CDS 1337096 - 1337860 736 ## COG0583 Transcriptional regulator - Prom 1338105 - 1338164 9.5 + Prom 1338084 - 1338143 7.8 1357 620 Op 1 30/0.000 + CDS 1338340 - 1339605 1467 ## COG0065 3-isopropylmalate dehydratase large subunit + Prom 1339649 - 1339708 3.1 1358 620 Op 2 . + CDS 1339841 - 1340347 511 ## COG0066 3-isopropylmalate dehydratase small subunit + Term 1340404 - 1340445 7.1 - Term 1340396 - 1340429 2.0 1359 621 Tu 1 . - CDS 1340487 - 1342688 619 ## COG1609 Transcriptional regulators - Prom 1342779 - 1342838 10.1 + Prom 1342896 - 1342955 9.1 1360 622 Op 1 35/0.000 + CDS 1342991 - 1344364 1078 ## COG1653 ABC-type sugar transport system, periplasmic component + Term 1344429 - 1344494 3.6 + Prom 1344407 - 1344466 1.6 1361 622 Op 2 38/0.000 + CDS 1344527 - 1345411 469 ## COG1175 ABC-type sugar transport systems, permease components 1362 622 Op 3 . + CDS 1345423 - 1346253 670 ## COG0395 ABC-type sugar transport system, permease component 1363 622 Op 4 . + CDS 1346262 - 1346945 298 ## COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III + Prom 1346957 - 1347016 2.2 1364 623 Op 1 . + CDS 1347049 - 1348353 695 ## COG0475 Kef-type K+ transport systems, membrane components 1365 623 Op 2 . + CDS 1348326 - 1348592 192 ## 1366 623 Op 3 . + CDS 1348655 - 1349380 236 ## PROTEIN SUPPORTED gi|163764775|ref|ZP_02171829.1| ribosomal protein L16 + Term 1349507 - 1349566 -0.3 - Term 1349313 - 1349345 -0.2 1367 624 Tu 1 . - CDS 1349400 - 1349882 413 ## EUBELI_00933 hypothetical protein - Prom 1349920 - 1349979 4.6 - Term 1350090 - 1350140 3.5 1368 625 Tu 1 . - CDS 1350157 - 1350612 271 ## Closa_2239 DNA polymerase B exonuclease - Prom 1350693 - 1350752 7.1 + Prom 1350638 - 1350697 12.0 1369 626 Op 1 24/0.000 + CDS 1350747 - 1352108 1498 ## COG0845 Membrane-fusion protein 1370 626 Op 2 36/0.000 + CDS 1352118 - 1352876 250 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 1371 626 Op 3 . + CDS 1352866 - 1354092 344 ## PROTEIN SUPPORTED gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 + Term 1354093 - 1354144 -0.5 + Prom 1354199 - 1354258 9.2 1372 626 Op 4 . + CDS 1354285 - 1354944 871 ## COG0778 Nitroreductase + Term 1355000 - 1355071 20.9 + Prom 1355020 - 1355079 5.4 1373 627 Op 1 29/0.000 + CDS 1355215 - 1355820 589 ## COG0632 Holliday junction resolvasome, DNA-binding subunit 1374 627 Op 2 . + CDS 1355824 - 1356822 1025 ## COG2255 Holliday junction resolvasome, helicase subunit 1375 627 Op 3 . + CDS 1356843 - 1357226 458 ## EUBELI_00944 hypothetical protein 1376 627 Op 4 . + CDS 1357226 - 1358548 1062 ## COG0826 Collagenase and related proteases 1377 627 Op 5 . + CDS 1358496 - 1359326 436 ## Closa_2235 peptidase U32 + Term 1359351 - 1359391 -0.5 1378 627 Op 6 19/0.000 + CDS 1359418 - 1360791 1353 ## COG0772 Bacterial cell division membrane protein 1379 627 Op 7 . + CDS 1360784 - 1362364 1149 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 1380 627 Op 8 . + CDS 1362381 - 1364177 220 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 1381 627 Op 9 . + CDS 1364178 - 1364435 251 ## gi|225389116|ref|ZP_03758840.1| hypothetical protein CLOSTASPAR_02862 1382 627 Op 10 35/0.000 + CDS 1364432 - 1365931 211 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 + Term 1366059 - 1366105 8.8 + Prom 1365996 - 1366055 7.2 1383 628 Op 1 35/0.000 + CDS 1366223 - 1367974 179 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 1384 628 Op 2 . + CDS 1367964 - 1369868 192 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P + Term 1370059 - 1370099 9.0 + TRNA 1369979 - 1370051 81.4 # Thr CGT 0 0 1385 629 Tu 1 . - CDS 1370048 - 1370272 64 ## - Prom 1370292 - 1370351 4.2 + Prom 1369981 - 1370040 75.5 1386 630 Op 1 . + CDS 1370271 - 1370690 464 ## gi|227872449|ref|ZP_03990791.1| hypothetical protein HMPREF6123_0730 1387 630 Op 2 . + CDS 1370708 - 1371634 722 ## COG1032 Fe-S oxidoreductase 1388 630 Op 3 . + CDS 1371644 - 1372918 842 ## COG0520 Selenocysteine lyase 1389 630 Op 4 . + CDS 1372942 - 1373637 724 ## COG3382 Uncharacterized conserved protein + Term 1373778 - 1373813 5.1 + Prom 1373669 - 1373728 6.9 1390 631 Op 1 . + CDS 1373912 - 1375201 1197 ## COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB 1391 631 Op 2 . + CDS 1375255 - 1375509 172 ## gi|225570920|ref|ZP_03779943.1| hypothetical protein CLOHYLEM_07024 + Term 1375515 - 1375551 3.2 + Prom 1375514 - 1375573 5.6 1392 632 Tu 1 . + CDS 1375658 - 1376593 735 ## COG0791 Cell wall-associated hydrolases (invasion-associated proteins) + Term 1376635 - 1376669 6.0 + Prom 1376635 - 1376694 7.5 1393 633 Op 1 . + CDS 1376882 - 1377637 416 ## COG3786 Uncharacterized protein conserved in bacteria 1394 633 Op 2 . + CDS 1377646 - 1378503 581 ## COG1284 Uncharacterized conserved protein + Prom 1378508 - 1378567 6.7 1395 634 Op 1 . + CDS 1378698 - 1379684 456 ## EUBREC_3385 hypothetical protein 1396 634 Op 2 . + CDS 1379699 - 1380667 834 ## COG0042 tRNA-dihydrouridine synthase 1397 634 Op 3 . + CDS 1380658 - 1381251 199 ## Fisuc_0574 hypothetical protein + Term 1381302 - 1381347 4.6 + Prom 1381301 - 1381360 4.6 1398 635 Tu 1 . + CDS 1381416 - 1381760 222 ## gi|227872441|ref|ZP_03990783.1| FliB family protein + Prom 1381806 - 1381865 2.5 1399 636 Tu 1 . + CDS 1381895 - 1383379 1356 ## COG4868 Uncharacterized protein conserved in bacteria + Term 1383434 - 1383473 4.0 1400 637 Op 1 . + CDS 1383920 - 1385551 1484 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases 1401 637 Op 2 . + CDS 1385580 - 1387280 1127 ## COG4624 Iron only hydrogenase large subunit, C-terminal domain + Term 1387327 - 1387385 9.1 + Prom 1387439 - 1387498 6.6 1402 638 Op 1 49/0.000 + CDS 1387664 - 1388581 999 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 1403 638 Op 2 44/0.000 + CDS 1388599 - 1389651 844 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 1404 638 Op 3 44/0.000 + CDS 1389665 - 1390675 618 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 1405 638 Op 4 2/0.038 + CDS 1390675 - 1391655 692 ## COG4608 ABC-type oligopeptide transport system, ATPase component 1406 638 Op 5 . + CDS 1391701 - 1393374 1747 ## COG4166 ABC-type oligopeptide transport system, periplasmic component + Term 1393419 - 1393464 9.7 + Prom 1393412 - 1393471 5.0 1407 639 Op 1 33/0.000 + CDS 1393491 - 1394195 735 ## COG0528 Uridylate kinase + Prom 1394197 - 1394256 2.0 1408 639 Op 2 19/0.000 + CDS 1394284 - 1394838 775 ## COG0233 Ribosome recycling factor 1409 639 Op 3 32/0.000 + CDS 1394835 - 1395560 680 ## COG0020 Undecaprenyl pyrophosphate synthase 1410 639 Op 4 15/0.000 + CDS 1395575 - 1396465 781 ## COG0575 CDP-diglyceride synthetase 1411 639 Op 5 17/0.000 + CDS 1396501 - 1397745 922 ## COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase + Prom 1397775 - 1397834 5.7 1412 639 Op 6 6/0.010 + CDS 1397912 - 1399015 781 ## COG0750 Predicted membrane-associated Zn-dependent proteases 1 + Prom 1399038 - 1399097 2.2 1413 640 Op 1 . + CDS 1399149 - 1400240 1104 ## COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis 1414 640 Op 2 1/0.105 + CDS 1400237 - 1404733 3779 ## COG2176 DNA polymerase III, alpha subunit (gram-positive type) + Prom 1404738 - 1404797 3.0 1415 641 Tu 1 . + CDS 1404886 - 1406985 1998 ## COG0480 Translation elongation factors (GTPases) + Term 1407018 - 1407057 7.4 + Prom 1407161 - 1407220 3.7 1416 642 Tu 1 . + CDS 1407255 - 1407710 281 ## COG1943 Transposase and inactivated derivatives - Term 1407862 - 1407892 4.3 1417 643 Op 1 . - CDS 1407930 - 1408646 365 ## Clole_3964 ABC transporter 1418 643 Op 2 . - CDS 1408643 - 1409458 351 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 1419 643 Op 3 . - CDS 1409461 - 1410255 404 ## COG0789 Predicted transcriptional regulators - Prom 1410330 - 1410389 5.3 + Prom 1410315 - 1410374 8.9 1420 644 Op 1 3/0.029 + CDS 1410599 - 1411609 1099 ## COG0416 Fatty acid/phospholipid biosynthesis enzyme 1421 644 Op 2 7/0.000 + CDS 1411612 - 1411848 428 ## COG0236 Acyl carrier protein 1422 644 Op 3 6/0.010 + CDS 1411850 - 1412566 686 ## COG0571 dsRNA-specific ribonuclease 1423 644 Op 4 10/0.000 + CDS 1412547 - 1415807 2637 ## COG1196 Chromosome segregation ATPases 1424 644 Op 5 . + CDS 1415884 - 1416756 740 ## PROTEIN SUPPORTED gi|163762490|ref|ZP_02169555.1| ribosomal protein L28 + Term 1416825 - 1416877 8.3 + Prom 1416820 - 1416879 9.2 1425 645 Op 1 . + CDS 1416937 - 1417911 227 ## COG4586 ABC-type uncharacterized transport system, ATPase component 1426 645 Op 2 . + CDS 1417908 - 1418528 193 ## Cphy_2674 hypothetical protein 1427 645 Op 3 . + CDS 1418528 - 1418710 132 ## Cphy_2674 hypothetical protein 1428 645 Op 4 . + CDS 1418716 - 1419492 326 ## COG3694 ABC-type uncharacterized transport system, permease component + Prom 1419500 - 1419559 2.8 1429 646 Tu 1 . + CDS 1419609 - 1419893 127 ## + Term 1419989 - 1420031 7.1 + Prom 1419969 - 1420028 6.0 1430 647 Op 1 . + CDS 1420055 - 1420369 289 ## gi|227872400|ref|ZP_03990747.1| transcriptional regulator 1431 647 Op 2 23/0.000 + CDS 1420359 - 1421741 1567 ## COG0541 Signal recognition particle GTPase + Prom 1421752 - 1421811 4.0 1432 647 Op 3 19/0.000 + CDS 1421895 - 1422134 391 ## PROTEIN SUPPORTED gi|227872398|ref|ZP_03990745.1| ribosomal protein S16 1433 647 Op 4 12/0.000 + CDS 1422146 - 1422385 57 ## PROTEIN SUPPORTED gi|120437355|ref|YP_863041.1| 30S ribosomal protein S16 + Term 1422451 - 1422506 -0.2 1434 647 Op 5 30/0.000 + CDS 1422519 - 1423043 178 ## PROTEIN SUPPORTED gi|163796730|ref|ZP_02190688.1| 50S ribosomal protein L19 1435 647 Op 6 . + CDS 1423040 - 1423771 548 ## COG0336 tRNA-(guanine-N1)-methyltransferase + Term 1423840 - 1423891 3.4 + Prom 1423834 - 1423893 8.9 1436 648 Op 1 . + CDS 1424078 - 1424917 459 ## COG1131 ABC-type multidrug transport system, ATPase component 1437 648 Op 2 . + CDS 1424904 - 1425611 540 ## LC705_00021 ABC transporter permease + Prom 1425623 - 1425682 6.2 1438 649 Op 1 5/0.019 + CDS 1425757 - 1426125 559 ## PROTEIN SUPPORTED gi|227872394|ref|ZP_03990741.1| 50S ribosomal protein L19 + Term 1426142 - 1426179 6.2 1439 649 Op 2 2/0.038 + CDS 1426185 - 1426712 359 ## COG0681 Signal peptidase I 1440 649 Op 3 8/0.000 + CDS 1426726 - 1427604 883 ## COG1161 Predicted GTPases + Prom 1427611 - 1427670 2.3 1441 649 Op 4 1/0.105 + CDS 1427692 - 1428336 604 ## COG0164 Ribonuclease HII + Prom 1428357 - 1428416 2.3 1442 650 Op 1 . + CDS 1428443 - 1428805 326 ## COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase 1443 650 Op 2 . + CDS 1428795 - 1428914 62 ## 1444 650 Op 3 . + CDS 1428933 - 1430084 1099 ## COG0180 Tryptophanyl-tRNA synthetase 1445 650 Op 4 . + CDS 1430057 - 1430605 382 ## COG3331 Penicillin-binding protein-related factor A, putative recombinase + Prom 1430617 - 1430676 3.3 1446 651 Op 1 17/0.000 + CDS 1430763 - 1432163 1259 ## COG0569 K+ transport systems, NAD-binding component 1447 651 Op 2 . + CDS 1432153 - 1433601 1145 ## COG0168 Trk-type K+ transport systems, membrane components + Term 1433808 - 1433849 4.5 + Prom 1433799 - 1433858 5.6 1448 652 Tu 1 . + CDS 1433978 - 1435057 925 ## COG0582 Integrase - Term 1435034 - 1435071 1.3 1449 653 Op 1 . - CDS 1435162 - 1435563 359 ## gi|291459077|ref|ZP_06598467.1| conserved hypothetical protein 1450 653 Op 2 . - CDS 1435576 - 1436334 631 ## COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) - Prom 1436402 - 1436461 7.0 1451 654 Op 1 6/0.010 - CDS 1436464 - 1436790 413 ## COG0799 Uncharacterized homolog of plant Iojap protein 1452 654 Op 2 . - CDS 1436871 - 1437482 524 ## COG1713 Predicted HD superfamily hydrolase involved in NAD metabolism 1453 654 Op 3 . - CDS 1437542 - 1437619 70 ## 1454 654 Op 4 7/0.000 - CDS 1437637 - 1438479 325 ## COG1057 Nicotinic acid mononucleotide adenylyltransferase 1455 654 Op 5 1/0.105 - CDS 1438479 - 1438778 184 ## PROTEIN SUPPORTED gi|146318023|ref|YP_001197735.1| RNA-binding protein 1456 654 Op 6 14/0.000 - CDS 1438775 - 1440103 1437 ## COG0536 Predicted GTPase - Term 1440119 - 1440156 8.0 1457 654 Op 7 32/0.000 - CDS 1440168 - 1440425 422 ## PROTEIN SUPPORTED gi|227872366|ref|ZP_03990717.1| ribosomal protein L27 1458 654 Op 8 . - CDS 1440478 - 1440783 491 ## PROTEIN SUPPORTED gi|227872365|ref|ZP_03990716.1| possible ribosomal protein L21 - Prom 1440857 - 1440916 2.4 - Term 1440931 - 1440973 0.5 1459 655 Tu 1 . - CDS 1441004 - 1442869 1325 ## Closa_2016 hypothetical protein - Prom 1442920 - 1442979 4.6 1460 656 Op 1 15/0.000 - CDS 1442996 - 1443910 338 ## PROTEIN SUPPORTED gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit 1461 656 Op 2 . - CDS 1443910 - 1444479 421 ## COG0597 Lipoprotein signal peptidase 1462 656 Op 3 . - CDS 1444480 - 1445574 716 ## COG0337 3-dehydroquinate synthetase 1463 656 Op 4 . - CDS 1445620 - 1446144 470 ## COG1799 Uncharacterized protein conserved in bacteria - Prom 1446174 - 1446233 6.7 1464 657 Op 1 . - CDS 1446235 - 1447557 989 ## Closa_2034 hypothetical protein 1465 657 Op 2 . - CDS 1447623 - 1448042 510 ## Closa_2035 hypothetical protein 1466 657 Op 3 . - CDS 1448118 - 1449065 456 ## COG1686 D-alanyl-D-alanine carboxypeptidase - Term 1449075 - 1449106 3.1 1467 658 Op 1 . - CDS 1449119 - 1449511 457 ## COG1803 Methylglyoxal synthase 1468 658 Op 2 19/0.000 - CDS 1449524 - 1450657 677 ## COG0772 Bacterial cell division membrane protein 1469 658 Op 3 . - CDS 1450670 - 1453540 2243 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 1470 658 Op 4 . - CDS 1453537 - 1454070 400 ## Closa_2043 rod shape-determining protein MreD 1471 658 Op 5 . - CDS 1454060 - 1454920 917 ## COG1792 Cell shape-determining protein 1472 658 Op 6 . - CDS 1454920 - 1455609 486 ## COG2003 DNA repair proteins - Prom 1455637 - 1455696 7.8 1473 659 Op 1 . - CDS 1455746 - 1457026 1200 ## COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance 1474 659 Op 2 12/0.000 - CDS 1456975 - 1457949 711 ## COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase 1475 659 Op 3 6/0.010 - CDS 1458018 - 1460132 1697 ## COG0323 DNA mismatch repair enzyme (predicted ATPase) 1476 659 Op 4 1/0.105 - CDS 1460129 - 1462852 2413 ## COG0249 Mismatch repair ATPase (MutS family) - Prom 1462891 - 1462950 4.3 1477 660 Tu 1 . - CDS 1462985 - 1464415 690 ## PROTEIN SUPPORTED gi|16079597|ref|NP_390421.1| hypothetical protein BSU25430 - Prom 1464436 - 1464495 2.9 - Term 1464639 - 1464679 7.2 1478 661 Op 1 . - CDS 1464759 - 1466345 1184 ## COG2509 Uncharacterized FAD-dependent dehydrogenases 1479 661 Op 2 . - CDS 1466362 - 1467348 801 ## COG2081 Predicted flavoproteins 1480 661 Op 3 . - CDS 1467381 - 1467725 278 ## COG2081 Predicted flavoproteins 1481 661 Op 4 . - CDS 1467768 - 1469453 1725 ## COG2244 Membrane protein involved in the export of O-antigen and teichoic acid 1482 661 Op 5 17/0.000 - CDS 1469450 - 1469947 564 ## COG0319 Predicted metal-dependent hydrolase 1483 661 Op 6 . - CDS 1469895 - 1470920 1002 ## COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase - Term 1470975 - 1471003 -0.2 1484 661 Op 7 . - CDS 1471010 - 1471216 286 ## PROTEIN SUPPORTED gi|227872333|ref|ZP_03990687.1| ribosomal protein S21 1485 661 Op 8 . - CDS 1471251 - 1471751 452 ## TDE2418 hypothetical protein - Prom 1471771 - 1471830 1.5 1486 661 Op 9 . - CDS 1471837 - 1472751 153 ## Swol_1745 transposase - Prom 1472771 - 1472830 7.8 + Prom 1472921 - 1472980 4.5 1487 662 Op 1 . + CDS 1473061 - 1473783 469 ## COG1609 Transcriptional regulators 1488 662 Op 2 . + CDS 1473811 - 1474005 76 ## + Term 1474142 - 1474190 5.2 1489 663 Op 1 . - CDS 1474064 - 1474261 113 ## 1490 663 Op 2 . - CDS 1474185 - 1474592 197 ## COG2188 Transcriptional regulators - Prom 1474716 - 1474775 4.5 1491 664 Tu 1 . - CDS 1474857 - 1475015 96 ## - Prom 1475035 - 1475094 3.5 - Term 1475037 - 1475078 3.2 1492 665 Op 1 . - CDS 1475177 - 1476016 531 ## BP951000_1876 hypothetical protein 1493 665 Op 2 . - CDS 1476033 - 1477589 940 ## Sterm_2791 phosphotransferase system component - Prom 1477714 - 1477773 8.0 + Prom 1477894 - 1477953 3.9 1494 666 Tu 1 . + CDS 1477977 - 1478309 219 ## Spico_1256 inner-membrane translocator + Term 1478384 - 1478424 7.2 1495 667 Op 1 . - CDS 1478283 - 1478453 110 ## - Prom 1478475 - 1478534 5.1 1496 667 Op 2 . - CDS 1478541 - 1479740 822 ## COG1373 Predicted ATPase (AAA+ superfamily) 1497 667 Op 3 . - CDS 1479727 - 1479918 121 ## - Prom 1479953 - 1480012 4.9 - Term 1479983 - 1480031 2.3 1498 668 Tu 1 . - CDS 1480066 - 1480317 159 ## Swol_1745 transposase - Prom 1480423 - 1480482 2.9 1499 669 Tu 1 . - CDS 1480990 - 1481469 -67 ## Tthe_2726 transposase 1500 670 Tu 1 . + CDS 1481514 - 1481798 372 ## COG1250 3-hydroxyacyl-CoA dehydrogenase - Term 1481550 - 1481578 2.3 1501 671 Op 1 . - CDS 1481800 - 1481946 100 ## 1502 671 Op 2 . - CDS 1482026 - 1483321 647 ## COG0477 Permeases of the major facilitator superfamily 1503 671 Op 3 . - CDS 1483348 - 1483776 262 ## gi|331084809|ref|ZP_08333897.1| hypothetical protein HMPREF0987_00200 1504 671 Op 4 . - CDS 1483825 - 1485477 1331 ## COG2897 Rhodanese-related sulfurtransferase - Prom 1485538 - 1485597 14.1 - Term 1485490 - 1485524 2.0 1505 672 Tu 1 . - CDS 1485727 - 1485993 191 ## - Prom 1486159 - 1486218 10.6 + Prom 1486142 - 1486201 8.8 1506 673 Tu 1 . + CDS 1486244 - 1488718 1837 ## Olsu_1732 polymorphic outer membrane protein + Term 1488764 - 1488815 15.1 - Term 1488752 - 1488802 10.6 1507 674 Op 1 . - CDS 1488845 - 1489444 91 ## Ccel_1021 hypothetical protein 1508 674 Op 2 . - CDS 1489470 - 1489763 102 ## 1509 674 Op 3 . - CDS 1489770 - 1492418 2402 ## COG0013 Alanyl-tRNA synthetase 1510 675 Op 1 . - CDS 1492530 - 1492646 118 ## 1511 675 Op 2 . - CDS 1492692 - 1493141 300 ## gi|227872328|ref|ZP_03990683.1| hypothetical protein HMPREF6123_0622 - Prom 1493187 - 1493246 3.5 1512 676 Op 1 18/0.000 - CDS 1493249 - 1493962 209 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 1513 676 Op 2 19/0.000 - CDS 1493964 - 1494722 221 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 1514 676 Op 3 24/0.000 - CDS 1494719 - 1495777 934 ## COG4177 ABC-type branched-chain amino acid transport system, permease component 1515 676 Op 4 20/0.000 - CDS 1495779 - 1496663 1085 ## COG0559 Branched-chain amino acid ABC-type transport system, permease components - Prom 1496756 - 1496815 4.2 - Term 1496676 - 1496719 7.2 1516 676 Op 5 . - CDS 1496834 - 1498024 1521 ## COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component - Prom 1498052 - 1498111 8.8 1517 677 Op 1 1/0.105 - CDS 1498204 - 1499205 828 ## COG0240 Glycerol-3-phosphate dehydrogenase 1518 677 Op 2 2/0.038 - CDS 1499224 - 1499895 611 ## COG0344 Predicted membrane protein 1519 677 Op 3 . - CDS 1499896 - 1501221 1432 ## COG1160 Predicted GTPases - Prom 1501249 - 1501308 8.8 - Term 1501296 - 1501340 4.6 1520 678 Tu 1 . - CDS 1501471 - 1505007 3327 ## COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit - Prom 1505072 - 1505131 6.3 - Term 1505137 - 1505196 11.2 1521 679 Tu 1 . - CDS 1505207 - 1507120 1465 ## COG2720 Uncharacterized vancomycin resistance protein - Prom 1507167 - 1507226 5.3 - Term 1507290 - 1507332 9.4 1522 680 Tu 1 . - CDS 1507418 - 1509835 2163 ## COG0495 Leucyl-tRNA synthetase - Prom 1509863 - 1509922 3.3 1523 681 Op 1 . - CDS 1509964 - 1512021 1043 ## COG3276 Selenocysteine-specific translation elongation factor 1524 681 Op 2 . - CDS 1512090 - 1512560 553 ## CLI_2534 PrdE protein 1525 681 Op 3 . - CDS 1512627 - 1513400 714 ## CD3240 hypothetical protein - Prom 1513475 - 1513534 5.4 1526 682 Tu 1 . - CDS 1513695 - 1513832 189 ## CLJ_B2705 D-proline reductase, PrdB subunit (EC:1.21.4.1) 1527 683 Op 1 . - CDS 1513968 - 1514420 554 ## Clos_0030 D-proline reductase (dithiol) (EC:1.21.4.1) 1528 683 Op 2 . - CDS 1514457 - 1514672 281 ## CLM_2775 hypothetical protein 1529 683 Op 3 . - CDS 1514702 - 1516621 1871 ## CLOST_2234 D-proline reductase proprotein prda [contains: D-proline reductase subunit beta (d-proline reductase 45 kda subunit); D-proline reductase subunit alpha (d-proline reductase 23 kda subunit)] (EC:1.21.4.1) 1530 683 Op 4 . - CDS 1516639 - 1518144 892 ## COG4656 Predicted NADH:ubiquinone oxidoreductase, subunit RnfC 1531 683 Op 5 . - CDS 1518147 - 1518254 87 ## 1532 683 Op 6 . - CDS 1518301 - 1520235 1383 ## COG0322 Nuclease subunit of the excinuclease complex 1533 683 Op 7 . - CDS 1520225 - 1521571 1001 ## COG1306 Uncharacterized conserved protein - Prom 1521597 - 1521656 6.1 - Term 1521862 - 1521901 1.0 1534 684 Op 1 2/0.038 - CDS 1521906 - 1523111 931 ## COG0426 Uncharacterized flavoproteins 1535 684 Op 2 . - CDS 1523178 - 1523342 202 ## COG1773 Rubredoxin - Prom 1523423 - 1523482 7.5 - Term 1523538 - 1523585 7.1 1536 685 Op 1 . - CDS 1523587 - 1523769 318 ## PROTEIN SUPPORTED gi|227872300|ref|ZP_03990657.1| possible ribosomal protein L32 1537 685 Op 2 . - CDS 1523786 - 1523902 66 ## 1538 685 Op 3 21/0.000 - CDS 1523972 - 1525165 1165 ## COG0282 Acetate kinase - Term 1525170 - 1525226 -0.1 1539 685 Op 4 . - CDS 1525235 - 1526239 1031 ## COG0280 Phosphotransacetylase - Prom 1526322 - 1526381 6.9 - Term 1526279 - 1526307 0.3 1540 686 Op 1 . - CDS 1526401 - 1526733 388 ## COG3870 Uncharacterized protein conserved in bacteria 1541 686 Op 2 . - CDS 1526832 - 1528049 710 ## COG1323 Predicted nucleotidyltransferase 1542 686 Op 3 . - CDS 1528097 - 1528873 698 ## COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I 1543 686 Op 4 . - CDS 1528842 - 1529516 277 ## Closa_1884 dephospho-CoA kinase 1544 686 Op 5 . - CDS 1529604 - 1529861 242 ## gi|227872291|ref|ZP_03990649.1| conserved hypothetical protein 1545 686 Op 6 . - CDS 1529861 - 1532455 2864 ## COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains 1546 686 Op 7 . - CDS 1532488 - 1532739 113 ## COG0258 5'-3' exonuclease (including N-terminal domain of PolI) 1547 686 Op 8 . - CDS 1532786 - 1533130 249 ## gi|227872289|ref|ZP_03990647.1| hypothetical protein HMPREF6123_0586 - Prom 1533254 - 1533313 80.3 + TRNA 1533235 - 1533313 68.4 # Leu CAA 0 0 - Term 1533310 - 1533343 4.0 1548 687 Op 1 . - CDS 1533348 - 1533989 770 ## COG0035 Uracil phosphoribosyltransferase 1549 687 Op 2 . - CDS 1533992 - 1534669 529 ## COG0110 Acetyltransferase (isoleucine patch superfamily) - Prom 1534695 - 1534754 2.9 1550 688 Op 1 . - CDS 1534791 - 1536731 1601 ## COG0550 Topoisomerase IA 1551 688 Op 2 . - CDS 1536733 - 1537782 328 ## PROTEIN SUPPORTED gi|15900011|ref|NP_344615.1| aldose 1-epimerase - Prom 1537847 - 1537906 7.6 - Term 1537852 - 1537920 9.1 1552 689 Tu 1 . - CDS 1537927 - 1539006 1083 ## COG0136 Aspartate-semialdehyde dehydrogenase - Prom 1539028 - 1539087 4.5 1553 690 Op 1 24/0.000 - CDS 1539184 - 1541418 2153 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 1554 690 Op 2 . - CDS 1541434 - 1543362 1750 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit - Prom 1543403 - 1543462 4.3 1555 691 Tu 1 . - CDS 1543570 - 1545102 1230 ## COG4468 Galactose-1-phosphate uridyltransferase - Prom 1545135 - 1545194 3.0 - Term 1545226 - 1545266 -0.2 1556 692 Op 1 2/0.038 - CDS 1545288 - 1546307 993 ## COG1087 UDP-glucose 4-epimerase 1557 692 Op 2 . - CDS 1546373 - 1547557 1023 ## COG0153 Galactokinase 1558 692 Op 3 . - CDS 1547630 - 1548283 388 ## Hden_0148 hypothetical protein 1559 692 Op 4 . - CDS 1548371 - 1549795 822 ## bpr_I0823 GDSL-family lipase/acylhydrolase 1560 692 Op 5 . - CDS 1549783 - 1551126 994 ## COG1376 Uncharacterized protein conserved in bacteria 1561 693 Op 1 . - CDS 1551250 - 1552038 398 ## COG0101 Pseudouridylate synthase 1562 693 Op 2 . - CDS 1552046 - 1552957 850 ## COG0583 Transcriptional regulator 1563 693 Op 3 . - CDS 1553035 - 1553994 800 ## COG0709 Selenophosphate synthase - Prom 1554140 - 1554199 9.7 - Term 1554082 - 1554128 2.7 1564 694 Op 1 . - CDS 1554222 - 1554944 372 ## COG0438 Glycosyltransferase 1565 694 Op 2 . - CDS 1554944 - 1555474 342 ## Ccur_11380 glycosyltransferase - Prom 1555503 - 1555562 4.7 + Prom 1555280 - 1555339 3.8 1566 695 Op 1 . + CDS 1555422 - 1555592 60 ## 1567 695 Op 2 . + CDS 1555568 - 1555765 69 ## + Term 1555928 - 1555986 6.2 - Term 1555589 - 1555626 5.3 1568 696 Op 1 . - CDS 1555808 - 1556044 150 ## EUBREC_3157 hypothetical protein 1569 696 Op 2 . - CDS 1556044 - 1556628 669 ## TepRe1_0427 selenium metabolism protein YedF - Prom 1556674 - 1556733 4.7 1570 697 Op 1 . - CDS 1556759 - 1557898 864 ## COG0520 Selenocysteine lyase 1571 697 Op 2 17/0.000 - CDS 1557895 - 1558941 791 ## COG3842 ABC-type spermidine/putrescine transport systems, ATPase components 1572 697 Op 3 21/0.000 - CDS 1558959 - 1560644 787 ## COG1178 ABC-type Fe3+ transport system, permease component 1573 697 Op 4 . - CDS 1560648 - 1561766 314 ## PROTEIN SUPPORTED gi|167854980|ref|ZP_02477755.1| 50S ribosomal protein L13 - Term 1561802 - 1561828 0.1 1574 698 Op 1 38/0.000 - CDS 1561890 - 1562822 515 ## PROTEIN SUPPORTED gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts - Prom 1562864 - 1562923 3.2 - Term 1562868 - 1562917 4.2 1575 698 Op 2 . - CDS 1562931 - 1563677 1228 ## PROTEIN SUPPORTED gi|227872261|ref|ZP_03990620.1| ribosomal protein S2 - Prom 1563723 - 1563782 5.2 - Term 1563819 - 1563847 -0.9 1576 699 Tu 1 . - CDS 1563891 - 1565900 1481 ## COG0550 Topoisomerase IA - Prom 1565925 - 1565984 3.1 1577 700 Tu 1 . + CDS 1565899 - 1566030 109 ## 1578 701 Op 1 2/0.038 - CDS 1565996 - 1566844 759 ## COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake 1579 701 Op 2 . - CDS 1566855 - 1568480 1142 ## COG0606 Predicted ATPase with chaperone activity - Prom 1568584 - 1568643 5.5 + Prom 1568187 - 1568246 3.5 1580 702 Tu 1 . + CDS 1568449 - 1568667 57 ## + Term 1568726 - 1568779 5.7 + TRNA 1568950 - 1569032 56.3 # Leu AAG 0 0 + Prom 1568957 - 1569016 80.4 1581 703 Op 1 . + CDS 1569190 - 1569954 596 ## COG0300 Short-chain dehydrogenases of various substrate specificities 1582 703 Op 2 . + CDS 1569958 - 1570953 458 ## COG0564 Pseudouridylate synthases, 23S RNA-specific + Term 1570999 - 1571045 5.0 - Term 1570985 - 1571031 5.0 1583 704 Op 1 . - CDS 1571043 - 1572572 927 ## gi|291459172|ref|ZP_06598562.1| hypothetical protein GCWU000341_01333 1584 704 Op 2 . - CDS 1572597 - 1573733 822 ## LSL_1296 hypothetical protein - TRNA 1573866 - 1573953 45.1 # Pseudo GGA 0 0 - Term 1573949 - 1573999 -0.6 1585 705 Op 1 19/0.000 - CDS 1574114 - 1574581 473 ## COG0822 NifU homolog involved in Fe-S cluster formation 1586 705 Op 2 1/0.105 - CDS 1574571 - 1575299 680 ## COG0520 Selenocysteine lyase 1587 705 Op 3 24/0.000 - CDS 1575323 - 1575688 308 ## COG0520 Selenocysteine lyase - Term 1575720 - 1575764 4.0 1588 705 Op 4 12/0.000 - CDS 1575801 - 1576859 1048 ## COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component 1589 705 Op 5 41/0.000 - CDS 1576873 - 1578288 1604 ## COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component 1590 705 Op 6 . - CDS 1578292 - 1579035 176 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein - Prom 1579145 - 1579204 8.8 - Term 1579389 - 1579420 -0.7 1591 706 Op 1 . - CDS 1579432 - 1579788 250 ## COG3862 Uncharacterized protein with conserved CXXC pairs 1592 706 Op 2 . - CDS 1579806 - 1581308 1108 ## COG0554 Glycerol kinase 1593 706 Op 3 . - CDS 1581325 - 1582398 706 ## COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 1594 706 Op 4 . - CDS 1582395 - 1583051 246 ## COG1313 Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins - Prom 1583104 - 1583163 5.1 + Prom 1583372 - 1583431 7.2 1595 707 Tu 1 . + CDS 1583452 - 1583583 203 ## gi|227872650|ref|ZP_03990980.1| peptidylprolyl isomerase + Prom 1583613 - 1583672 1.8 1596 708 Tu 1 . + CDS 1583730 - 1583936 301 ## COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family + Term 1584161 - 1584189 -0.6 1597 709 Op 1 8/0.000 - CDS 1584397 - 1588233 3426 ## COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) 1598 709 Op 2 . - CDS 1588226 - 1591954 2584 ## COG3857 ATP-dependent nuclease, subunit B - Prom 1591985 - 1592044 1.6 1599 710 Op 1 . - CDS 1592048 - 1592986 696 ## COG1957 Inosine-uridine nucleoside N-ribohydrolase 1600 710 Op 2 . - CDS 1592989 - 1593051 84 ## - Prom 1593087 - 1593146 2.2 - Term 1593120 - 1593160 -0.4 1601 711 Op 1 . - CDS 1593237 - 1594076 309 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 1602 711 Op 2 . - CDS 1594070 - 1594867 394 ## COG4135 ABC-type uncharacterized transport system, permease component 1603 711 Op 3 . - CDS 1594870 - 1595700 505 ## COG1176 ABC-type spermidine/putrescine transport system, permease component I 1604 711 Op 4 . - CDS 1595702 - 1597027 1614 ## COG4134 ABC-type uncharacterized transport system, periplasmic component 1605 711 Op 5 . - CDS 1597053 - 1597772 648 ## COG0398 Uncharacterized conserved protein 1606 711 Op 6 . - CDS 1597772 - 1598569 952 ## COG0607 Rhodanese-related sulfurtransferase - Prom 1598606 - 1598665 8.8 - Term 1598669 - 1598714 2.4 1607 712 Op 1 . - CDS 1598728 - 1599789 816 ## Closa_1177 aminoglycoside phosphotransferase 1608 712 Op 2 . - CDS 1599755 - 1601353 757 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 1609 712 Op 3 . - CDS 1601423 - 1602394 552 ## COG0247 Fe-S oxidoreductase - Prom 1602472 - 1602531 3.7 1610 713 Tu 1 . - CDS 1602536 - 1603087 332 ## COG0398 Uncharacterized conserved protein - Prom 1603140 - 1603199 4.5 1611 714 Tu 1 . - CDS 1603213 - 1603635 127 ## gi|227872178|ref|ZP_03990545.1| hypothetical protein HMPREF6123_0484 - Prom 1603675 - 1603734 2.8 - Term 1603697 - 1603748 4.3 1612 715 Tu 1 . - CDS 1603759 - 1604889 1285 ## COG2897 Rhodanese-related sulfurtransferase - Prom 1604978 - 1605037 7.3 1613 716 Op 1 . - CDS 1605105 - 1605212 69 ## 1614 716 Op 2 . - CDS 1605293 - 1605643 559 ## PROTEIN SUPPORTED gi|227872176|ref|ZP_03990543.1| ribosomal protein L20 1615 716 Op 3 . - CDS 1605670 - 1605873 304 ## PROTEIN SUPPORTED gi|227872175|ref|ZP_03990542.1| ribosomal protein L35 1616 716 Op 4 . - CDS 1605891 - 1606412 348 ## PROTEIN SUPPORTED gi|163801060|ref|ZP_02194960.1| 50S ribosomal protein L35 - Prom 1606562 - 1606621 3.2 - Term 1606525 - 1606563 7.0 1617 717 Op 1 4/0.029 - CDS 1606683 - 1607318 608 ## COG0218 Predicted GTPase 1618 717 Op 2 24/0.000 - CDS 1607320 - 1608636 263 ## PROTEIN SUPPORTED gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 1619 717 Op 3 29/0.000 - CDS 1608640 - 1609278 586 ## COG0740 Protease subunit of ATP-dependent Clp proteases - Prom 1609300 - 1609359 4.7 - Term 1609432 - 1609485 -0.7 1620 717 Op 4 . - CDS 1609487 - 1610821 1588 ## COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) - Prom 1610922 - 1610981 5.4 1621 718 Tu 1 . - CDS 1611015 - 1611494 260 ## COG2954 Uncharacterized protein conserved in bacteria - Prom 1611522 - 1611581 4.8 - Term 1611526 - 1611564 7.7 1622 719 Op 1 4/0.029 - CDS 1611617 - 1612723 1793 ## PROTEIN SUPPORTED gi|227872165|ref|ZP_03990534.1| possible ribosomal protein S1 1623 719 Op 2 . - CDS 1612704 - 1612985 249 ## PROTEIN SUPPORTED gi|227423810|ref|ZP_03906912.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SSU ribosomal protein S1P 1624 719 Op 3 . - CDS 1612927 - 1613460 258 ## PROTEIN SUPPORTED gi|229229955|ref|ZP_04354520.1| SSU ribosomal protein S1P; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1625 719 Op 4 . - CDS 1613418 - 1613573 63 ## 1626 719 Op 5 1/0.105 - CDS 1613575 - 1614243 658 ## COG0283 Cytidylate kinase 1627 719 Op 6 . - CDS 1614261 - 1615622 917 ## COG2081 Predicted flavoproteins 1628 719 Op 7 . - CDS 1615636 - 1616964 1258 ## COG0527 Aspartokinases 1629 719 Op 8 . - CDS 1616957 - 1617064 93 ## 1630 719 Op 9 . - CDS 1617116 - 1618462 179 ## PROTEIN SUPPORTED gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 1631 719 Op 10 . - CDS 1618462 - 1620546 1991 ## Closa_2183 hypothetical protein 1632 719 Op 11 . - CDS 1620533 - 1621321 770 ## COG1136 ABC-type antimicrobial peptide transport system, ATPase component - Prom 1621358 - 1621417 7.3 - Term 1621435 - 1621487 12.5 1633 720 Tu 1 . - CDS 1621549 - 1622865 1155 ## COG0172 Seryl-tRNA synthetase - Prom 1622935 - 1622994 5.4 1634 721 Op 1 10/0.000 - CDS 1622996 - 1623661 601 ## COG0036 Pentose-5-phosphate-3-epimerase 1635 721 Op 2 7/0.000 - CDS 1623682 - 1624638 576 ## COG1162 Predicted GTPases 1636 721 Op 3 17/0.000 - CDS 1624580 - 1626598 1763 ## COG0515 Serine/threonine protein kinase 1637 721 Op 4 5/0.019 - CDS 1626605 - 1627339 694 ## COG0631 Serine/threonine protein phosphatase 1638 721 Op 5 4/0.029 - CDS 1627339 - 1628391 709 ## COG0820 Predicted Fe-S-cluster redox enzyme 1639 721 Op 6 20/0.000 - CDS 1628379 - 1629719 725 ## COG0144 tRNA and rRNA cytosine-C5-methylases 1640 721 Op 7 26/0.000 - CDS 1629830 - 1630825 713 ## COG0223 Methionyl-tRNA formyltransferase 1641 721 Op 8 4/0.029 - CDS 1630837 - 1631331 684 ## COG0242 N-formylmethionyl-tRNA deformylase 1642 721 Op 9 1/0.105 - CDS 1631377 - 1633071 986 ## COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase 1643 721 Op 10 . - CDS 1633035 - 1633355 282 ## COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase 1644 721 Op 11 26/0.000 - CDS 1633365 - 1634699 895 ## COG0770 UDP-N-acetylmuramyl pentapeptide synthase 1645 721 Op 12 . - CDS 1634701 - 1636194 1287 ## COG0769 UDP-N-acetylmuramyl tripeptide synthase 1646 721 Op 13 . - CDS 1636234 - 1637898 1601 ## COG2759 Formyltetrahydrofolate synthetase 1647 721 Op 14 . - CDS 1637901 - 1640234 1673 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins - Prom 1640297 - 1640356 6.1 - Term 1640359 - 1640405 3.1 1648 722 Op 1 . - CDS 1640509 - 1641840 1027 ## Bsel_0247 hypothetical protein 1649 722 Op 2 . - CDS 1641907 - 1643826 1791 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains 1650 722 Op 3 . - CDS 1643840 - 1645198 1100 ## COG0534 Na+-driven multidrug efflux pump 1651 722 Op 4 . - CDS 1645218 - 1647164 1257 ## COG3855 Uncharacterized protein conserved in bacteria - Prom 1647261 - 1647320 4.8 - Term 1647374 - 1647433 1.8 1652 723 Op 1 . - CDS 1647485 - 1649353 1253 ## PROTEIN SUPPORTED gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 1653 723 Op 2 . - CDS 1649311 - 1649433 67 ## - Prom 1649490 - 1649549 6.1 - Term 1649469 - 1649508 5.5 1654 724 Op 1 4/0.029 - CDS 1649618 - 1649920 290 ## COG1937 Uncharacterized protein conserved in bacteria 1655 724 Op 2 . - CDS 1649933 - 1652509 2126 ## COG2217 Cation transport ATPase - Prom 1652593 - 1652652 5.5 - Term 1652590 - 1652620 1.3 1656 725 Op 1 . - CDS 1652664 - 1652954 159 ## 1657 725 Op 2 . - CDS 1652944 - 1654482 1258 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair - Prom 1654690 - 1654749 9.2 - Term 1654670 - 1654723 10.3 1658 726 Op 1 . - CDS 1654764 - 1655636 692 ## COG1307 Uncharacterized protein conserved in bacteria 1659 726 Op 2 . - CDS 1655709 - 1657313 1589 ## COG0791 Cell wall-associated hydrolases (invasion-associated proteins) 1660 726 Op 3 . - CDS 1657360 - 1658202 393 ## COG1496 Uncharacterized conserved protein 1661 726 Op 4 . - CDS 1658204 - 1658827 695 ## COG1011 Predicted hydrolase (HAD superfamily) - Prom 1658847 - 1658906 6.2 - TRNA 1658879 - 1658950 64.2 # Glu CTC 0 0 - Term 1658874 - 1658903 -0.9 1662 727 Op 1 . - CDS 1658980 - 1660320 915 ## COG0128 5-enolpyruvylshikimate-3-phosphate synthase 1663 727 Op 2 . - CDS 1660317 - 1660952 598 ## Closa_3203 hypothetical protein - Prom 1660983 - 1661042 3.7 1664 728 Op 1 13/0.000 - CDS 1661113 - 1661907 274 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 1665 728 Op 2 9/0.000 - CDS 1661900 - 1662829 1042 ## COG4120 ABC-type uncharacterized transport system, permease component - Prom 1662856 - 1662915 4.2 1666 728 Op 3 . - CDS 1663010 - 1664131 1298 ## COG2984 ABC-type uncharacterized transport system, periplasmic component - Prom 1664156 - 1664215 3.9 - Term 1664184 - 1664223 7.4 1667 729 Op 1 9/0.000 - CDS 1664274 - 1664564 246 ## COG3041 Uncharacterized protein conserved in bacteria 1668 729 Op 2 . - CDS 1664561 - 1664839 338 ## COG3077 DNA-damage-inducible protein J - Prom 1664866 - 1664925 6.3 - Term 1664957 - 1665000 10.4 1669 730 Op 1 . - CDS 1665156 - 1665446 256 ## PTH_0033 hypothetical protein 1670 730 Op 2 . - CDS 1665449 - 1665820 361 ## Swol_0287 hypothetical protein 1671 730 Op 3 . - CDS 1665837 - 1665995 98 ## - Prom 1666132 - 1666191 4.3 + Prom 1666010 - 1666069 7.2 1672 731 Tu 1 . + CDS 1666129 - 1667004 670 ## COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase - Term 1666869 - 1666925 -0.6 1673 732 Tu 1 . - CDS 1667085 - 1667750 836 ## gi|227872128|ref|ZP_03990499.1| hypothetical protein HMPREF6123_0438 - Prom 1667793 - 1667852 2.7 1674 733 Op 1 42/0.000 - CDS 1667912 - 1668736 703 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 1675 733 Op 2 . - CDS 1668729 - 1669088 432 ## COG1121 ABC-type Mn/Zn transport systems, ATPase component 1676 733 Op 3 25/0.000 - CDS 1669076 - 1669438 194 ## COG1121 ABC-type Mn/Zn transport systems, ATPase component 1677 733 Op 4 . - CDS 1669439 - 1670539 1352 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin 1678 733 Op 5 . - CDS 1670564 - 1671004 374 ## Trebr_1245 ferric uptake regulator, Fur family - Prom 1671097 - 1671156 6.2 + Prom 1670876 - 1670935 2.7 1679 734 Op 1 . + CDS 1670972 - 1671085 59 ## + Prom 1671089 - 1671148 5.0 1680 734 Op 2 . + CDS 1671170 - 1671301 59 ## - Term 1671174 - 1671208 2.1 1681 735 Tu 1 . - CDS 1671248 - 1671970 873 ## COG2013 Uncharacterized conserved protein - Prom 1672055 - 1672114 3.3 1682 736 Op 1 7/0.000 - CDS 1672137 - 1673987 1264 ## COG2972 Predicted signal transduction protein with a C-terminal ATPase domain 1683 736 Op 2 . - CDS 1673968 - 1674708 685 ## COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain 1684 736 Op 3 . - CDS 1674719 - 1675141 299 ## COG2608 Copper chaperone - Prom 1675205 - 1675264 4.3 1685 737 Op 1 . - CDS 1675313 - 1675525 214 ## COG3655 Predicted transcriptional regulator - Prom 1675554 - 1675613 7.8 - Term 1675562 - 1675598 1.2 1686 737 Op 2 1/0.105 - CDS 1675625 - 1676638 330 ## PROTEIN SUPPORTED gi|116517028|ref|YP_816079.1| glucokinase - Prom 1676662 - 1676721 3.0 - Term 1676663 - 1676701 4.3 1687 738 Op 1 16/0.000 - CDS 1676725 - 1677747 1216 ## COG1879 ABC-type sugar transport system, periplasmic component 1688 738 Op 2 21/0.000 - CDS 1677786 - 1678793 1007 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 1689 738 Op 3 . - CDS 1678882 - 1680381 1173 ## COG1129 ABC-type sugar transport system, ATPase component - Prom 1680416 - 1680475 8.0 - Term 1680398 - 1680454 14.0 1690 739 Op 1 . - CDS 1680534 - 1681655 560 ## gi|227873220|ref|ZP_03991493.1| hypothetical protein HMPREF6123_1432 - Prom 1681676 - 1681735 2.1 1691 739 Op 2 . - CDS 1681803 - 1683014 603 ## COG1373 Predicted ATPase (AAA+ superfamily) - Prom 1683048 - 1683107 6.1 - Term 1683069 - 1683116 6.2 1692 740 Tu 1 . - CDS 1683194 - 1683619 425 ## COG1959 Predicted transcriptional regulator - Prom 1683655 - 1683714 1.8 + Prom 1683914 - 1683973 10.8 1693 741 Tu 1 . + CDS 1684063 - 1684737 313 ## gi|255693751|ref|ZP_05417426.1| conserved hypothetical protein + Term 1684830 - 1684863 1.1 1694 742 Tu 1 . - CDS 1685050 - 1685208 132 ## - Prom 1685234 - 1685293 6.6 1695 743 Op 1 . - CDS 1685452 - 1685562 83 ## 1696 743 Op 2 . - CDS 1685620 - 1685988 425 ## TDE0520 hypothetical protein 1697 743 Op 3 . - CDS 1685994 - 1687085 529 ## TDE0552 ankyrin repeateat-containing protein 1698 743 Op 4 . - CDS 1687105 - 1688169 640 ## COG0666 FOG: Ankyrin repeat - Prom 1688235 - 1688294 4.6 - Term 1688224 - 1688263 2.1 1699 744 Tu 1 . - CDS 1688305 - 1688502 122 ## gi|227871980|ref|ZP_03990367.1| hypothetical protein HMPREF6123_0306 - Prom 1688560 - 1688619 2.8 1700 745 Tu 1 . - CDS 1688626 - 1689387 517 ## COG0500 SAM-dependent methyltransferases - Prom 1689539 - 1689598 5.1 1701 746 Op 1 . - CDS 1689647 - 1689856 152 ## TDE0503 hypothetical protein 1702 746 Op 2 . - CDS 1689907 - 1690239 167 ## TDE0503 hypothetical protein - Prom 1690267 - 1690326 3.4 1703 747 Tu 1 . - CDS 1690341 - 1691258 616 ## COG3344 Retron-type reverse transcriptase - Prom 1691447 - 1691506 3.0 1704 748 Tu 1 . - CDS 1691630 - 1691755 58 ## - Prom 1691877 - 1691936 4.8 + Prom 1691703 - 1691762 2.7 1705 749 Tu 1 . + CDS 1691809 - 1692120 94 ## TepRe1_0868 hypothetical protein + Prom 1692496 - 1692555 4.3 1706 750 Op 1 . + CDS 1692580 - 1693371 256 ## PROTEIN SUPPORTED gi|225088774|ref|YP_002660041.1| ribosomal protein S16 1707 750 Op 2 . + CDS 1693355 - 1695031 525 ## CLI_0861 hypothetical protein + Term 1695139 - 1695191 11.0 + Prom 1695631 - 1695690 2.9 1708 751 Tu 1 . + CDS 1695710 - 1695943 84 ## Closa_0557 IS66 Orf2 family protein - Term 1696166 - 1696198 -0.8 1709 752 Tu 1 . - CDS 1696352 - 1696567 295 ## EUBREC_1606 putative reverse transcriptasematurase of intron - Term 1696797 - 1696827 3.0 1710 753 Op 1 10/0.000 - CDS 1696979 - 1697914 365 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components - Prom 1697969 - 1698028 1.9 1711 753 Op 2 42/0.000 - CDS 1698033 - 1698911 488 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 1712 753 Op 3 25/0.000 - CDS 1698904 - 1699623 288 ## PROTEIN SUPPORTED gi|225084369|ref|YP_002657150.1| ribosomal protein S16 1713 753 Op 4 1/0.105 - CDS 1699636 - 1699989 243 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin 1714 753 Op 5 . - CDS 1700058 - 1700429 201 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin 1715 753 Op 6 . - CDS 1700456 - 1700554 87 ## - Prom 1700699 - 1700758 10.3 1716 754 Tu 1 . - CDS 1700937 - 1701260 316 ## COG3344 Retron-type reverse transcriptase - Prom 1701455 - 1701514 4.7 - Term 1701435 - 1701488 9.1 1717 755 Op 1 . - CDS 1701614 - 1701853 158 ## COG2110 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 1718 755 Op 2 2/0.038 - CDS 1701917 - 1702402 419 ## COG2110 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 - Prom 1702472 - 1702531 7.4 - Term 1702511 - 1702547 -0.8 1719 756 Tu 1 . - CDS 1702567 - 1703514 804 ## COG0846 NAD-dependent protein deacetylases, SIR2 family - Prom 1703550 - 1703609 3.2 1720 757 Tu 1 . - CDS 1703653 - 1704288 713 ## COG2910 Putative NADH-flavin reductase - Prom 1704446 - 1704505 9.2 + Prom 1704423 - 1704482 6.5 1721 758 Tu 1 . + CDS 1704728 - 1705078 199 ## CJJ81176_pTet0052 cpp4 + Term 1705297 - 1705334 1.0 - Term 1705094 - 1705127 1.1 1722 759 Op 1 . - CDS 1705232 - 1705465 209 ## Fisuc_2057 hypothetical protein 1723 759 Op 2 . - CDS 1705453 - 1706019 280 ## Fisuc_2056 hypothetical protein 1724 759 Op 3 . - CDS 1706012 - 1706236 230 ## Fisuc_2055 hypothetical protein 1725 759 Op 4 . - CDS 1706281 - 1706472 198 ## gi|227873248|ref|ZP_03991518.1| conserved hypothetical protein 1726 759 Op 5 . - CDS 1706460 - 1707500 900 ## EUBELI_01577 hypothetical protein 1727 759 Op 6 . - CDS 1707532 - 1707879 187 ## Dred_0028 hypothetical protein 1728 759 Op 7 . - CDS 1707851 - 1707958 108 ## 1729 759 Op 8 . - CDS 1707952 - 1708899 462 ## Elen_0853 hypothetical protein - Prom 1708938 - 1708997 8.6 1730 760 Op 1 1/0.105 - CDS 1709075 - 1709833 855 ## COG1540 Uncharacterized proteins, homologs of lactam utilization protein B 1731 760 Op 2 27/0.000 - CDS 1709840 - 1711189 1416 ## COG0439 Biotin carboxylase 1732 760 Op 3 1/0.105 - CDS 1711243 - 1711698 587 ## COG0511 Biotin carboxyl carrier protein 1733 760 Op 4 21/0.000 - CDS 1711725 - 1712732 980 ## COG1984 Allophanate hydrolase subunit 2 1734 760 Op 5 1/0.105 - CDS 1712734 - 1713459 756 ## COG2049 Allophanate hydrolase subunit 1 - Prom 1713508 - 1713567 3.0 - Term 1713479 - 1713516 3.9 1735 761 Tu 1 . - CDS 1713596 - 1714789 1614 ## COG1914 Mn2+ and Fe2+ transporters of the NRAMP family - Prom 1714909 - 1714968 7.0 + Prom 1714898 - 1714957 9.0 1736 762 Tu 1 . + CDS 1714983 - 1715774 677 ## gi|227872899|ref|ZP_03991203.1| hypothetical protein HMPREF6123_1142 + Term 1715899 - 1715929 4.3 - Term 1715887 - 1715917 4.3 1737 763 Tu 1 . - CDS 1716085 - 1716540 220 ## COG1943 Transposase and inactivated derivatives - Prom 1716574 - 1716633 3.7 - Term 1716697 - 1716747 12.0 1738 764 Op 1 . - CDS 1716779 - 1718722 1742 ## Closa_2778 ADP-ribosylation/Crystallin J1 - Term 1718731 - 1718762 0.2 1739 764 Op 2 . - CDS 1718808 - 1719668 581 ## COG0668 Small-conductance mechanosensitive channel - Prom 1719723 - 1719782 6.6 - Term 1719792 - 1719832 4.1 1740 765 Tu 1 . - CDS 1719861 - 1720343 473 ## gi|227872108|ref|ZP_03990481.1| hypothetical protein HMPREF6123_0420 - Prom 1720497 - 1720556 10.9 1741 766 Op 1 . - CDS 1720613 - 1721641 1004 ## Closa_2430 G3E family GTPase-like protein 1742 766 Op 2 . - CDS 1721652 - 1722899 1275 ## COG0523 Putative GTPases (G3E family) - Prom 1722948 - 1723007 5.4 1743 767 Tu 1 . - CDS 1723030 - 1723785 717 ## COG0546 Predicted phosphatases - Prom 1723818 - 1723877 6.4 + Prom 1723780 - 1723839 5.2 1744 768 Tu 1 . + CDS 1723920 - 1724642 424 ## COG3341 Predicted double-stranded RNA/RNA-DNA hybrid binding protein + Term 1724656 - 1724711 19.9 1745 769 Tu 1 . - CDS 1724782 - 1725789 900 ## COG2502 Asparagine synthetase A - Prom 1725930 - 1725989 5.4 1746 770 Tu 1 . - CDS 1725994 - 1726299 280 ## gi|227872101|ref|ZP_03990474.1| hypothetical protein HMPREF6123_0413 - Prom 1726334 - 1726393 4.0 - Term 1726405 - 1726446 4.1 1747 771 Tu 1 . - CDS 1726456 - 1727712 1300 ## COG4260 Putative virion core protein (lumpy skin disease virus) - Prom 1727887 - 1727946 5.9 + Prom 1727730 - 1727789 5.7 1748 772 Op 1 17/0.000 + CDS 1727997 - 1729319 821 ## COG0168 Trk-type K+ transport systems, membrane components 1749 772 Op 2 . + CDS 1729391 - 1730044 743 ## COG0569 K+ transport systems, NAD-binding component + Term 1730249 - 1730287 3.0 + Prom 1730067 - 1730126 5.7 1750 773 Tu 1 . + CDS 1730343 - 1731401 1101 ## COG0192 S-adenosylmethionine synthetase + Term 1731427 - 1731464 6.2 - Term 1731414 - 1731450 2.2 1751 774 Tu 1 . - CDS 1731542 - 1732183 303 ## BPUM_0483 histone acetyltransferase HPA2-like protein - Prom 1732388 - 1732447 7.1 + Prom 1732345 - 1732404 5.5 1752 775 Tu 1 . + CDS 1732480 - 1734603 1786 ## COG0840 Methyl-accepting chemotaxis protein + Term 1734656 - 1734718 23.4 - Term 1734652 - 1734699 16.6 1753 776 Op 1 13/0.000 - CDS 1734744 - 1735460 820 ## COG0149 Triosephosphate isomerase - Prom 1735498 - 1735557 2.4 1754 776 Op 2 26/0.000 - CDS 1735581 - 1736798 1408 ## COG0126 3-phosphoglycerate kinase - Prom 1736899 - 1736958 1.9 - Term 1736918 - 1736956 1.4 1755 776 Op 3 . - CDS 1736971 - 1737996 1070 ## COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase - Prom 1738076 - 1738135 6.7 - Term 1738151 - 1738191 6.1 1756 777 Tu 1 . - CDS 1738243 - 1739928 1436 ## COG1283 Na+/phosphate symporter - Prom 1740003 - 1740062 7.7 + Prom 1739982 - 1740041 5.4 1757 778 Tu 1 . + CDS 1740215 - 1740385 57 ## - Term 1740380 - 1740420 8.3 1758 779 Tu 1 . - CDS 1740445 - 1741263 921 ## EUBREC_0966 N-acetylmuramoyl-L-alanine amidase domain protein - Prom 1741303 - 1741362 3.6 1759 780 Op 1 . - CDS 1741372 - 1742214 674 ## COG1968 Uncharacterized bacitracin resistance protein - Prom 1742240 - 1742299 2.7 - Term 1742224 - 1742261 -0.6 1760 780 Op 2 . - CDS 1742304 - 1742972 547 ## COG0692 Uracil DNA glycosylase 1761 780 Op 3 . - CDS 1742981 - 1743655 462 ## EUBELI_01251 hypothetical protein 1762 780 Op 4 . - CDS 1743652 - 1745568 1496 ## COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein - Prom 1745603 - 1745662 4.4 - Term 1745612 - 1745653 4.0 1763 781 Tu 1 . - CDS 1745664 - 1746770 1148 ## COG5263 FOG: Glucan-binding domain (YG repeat) - Prom 1746912 - 1746971 5.9 - Term 1746984 - 1747021 4.0 1764 782 Tu 1 . - CDS 1747088 - 1748446 1537 ## COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases - Prom 1748493 - 1748552 5.8 - Term 1748612 - 1748655 8.4 1765 783 Tu 1 . - CDS 1748674 - 1750590 1550 ## COG4750 CTP:phosphocholine cytidylyltransferase involved in choline phosphorylation for cell surface LPS epitopes - Prom 1750653 - 1750712 5.5 - Term 1750718 - 1750761 -0.5 1766 784 Tu 1 . - CDS 1750787 - 1752889 1694 ## COG3968 Uncharacterized protein related to glutamine synthetase - Prom 1752974 - 1753033 2.9 - Term 1752960 - 1753010 5.4 1767 785 Op 1 . - CDS 1753050 - 1753916 1121 ## COG0191 Fructose/tagatose bisphosphate aldolase 1768 785 Op 2 . - CDS 1753999 - 1755477 1403 ## COG0498 Threonine synthase - Prom 1755507 - 1755566 2.5 1769 786 Op 1 . - CDS 1755580 - 1756293 620 ## Closa_0457 hypothetical protein 1770 786 Op 2 . - CDS 1756286 - 1757227 897 ## COG1131 ABC-type multidrug transport system, ATPase component 1771 786 Op 3 . - CDS 1757224 - 1759596 1805 ## Closa_0455 hypothetical protein 1772 786 Op 4 40/0.000 - CDS 1759577 - 1760866 1178 ## COG0642 Signal transduction histidine kinase 1773 786 Op 5 . - CDS 1760878 - 1761579 990 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 1774 786 Op 6 . - CDS 1761667 - 1762815 796 ## COG0077 Prephenate dehydratase 1775 786 Op 7 . - CDS 1762834 - 1763610 727 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase 1776 786 Op 8 3/0.029 - CDS 1763620 - 1764387 669 ## COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component - Prom 1764524 - 1764583 2.3 1777 787 Op 1 8/0.000 - CDS 1764612 - 1765649 747 ## COG0463 Glycosyltransferases involved in cell wall biogenesis - Prom 1765781 - 1765840 7.5 - Term 1765741 - 1765786 1.2 1778 787 Op 2 . - CDS 1765854 - 1767119 823 ## COG2244 Membrane protein involved in the export of O-antigen and teichoic acid - Prom 1767201 - 1767260 7.2 + Prom 1767117 - 1767176 5.6 1779 788 Op 1 . + CDS 1767243 - 1767332 68 ## 1780 788 Op 2 . + CDS 1767386 - 1768399 757 ## COG1216 Predicted glycosyltransferases 1781 789 Tu 1 . - CDS 1768556 - 1770223 1707 ## COG0119 Isopropylmalate/homocitrate/citramalate synthases - Prom 1770270 - 1770329 3.2 1782 790 Tu 1 . - CDS 1770346 - 1771698 1640 ## COG1109 Phosphomannomutase - Prom 1771808 - 1771867 5.8 - Term 1771866 - 1771899 3.1 1783 791 Op 1 11/0.000 - CDS 1771977 - 1772903 907 ## COG1091 dTDP-4-dehydrorhamnose reductase 1784 791 Op 2 16/0.000 - CDS 1772905 - 1773927 1051 ## COG1088 dTDP-D-glucose 4,6-dehydratase 1785 791 Op 3 . - CDS 1773975 - 1774853 1036 ## COG1209 dTDP-glucose pyrophosphorylase - Prom 1774889 - 1774948 6.2 + Prom 1774935 - 1774994 6.6 1786 792 Op 1 1/0.105 + CDS 1775021 - 1775497 407 ## COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 1787 792 Op 2 1/0.105 + CDS 1775482 - 1775835 273 ## COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 1788 792 Op 3 . + CDS 1775895 - 1776119 211 ## COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 1789 793 Tu 1 . - CDS 1776116 - 1777765 1264 ## COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain - Prom 1777812 - 1777871 1.8 1790 794 Tu 1 . - CDS 1777893 - 1779242 1236 ## COG0726 Predicted xylanase/chitin deacetylase - Prom 1779334 - 1779393 5.3 + Prom 1779318 - 1779377 10.4 1791 795 Op 1 . + CDS 1779433 - 1780581 825 ## Closa_2524 hypothetical protein 1792 795 Op 2 . + CDS 1780572 - 1781291 589 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases + Term 1781381 - 1781417 5.2 1793 796 Tu 1 . - CDS 1781319 - 1782920 1447 ## COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain 1794 797 Tu 1 . - CDS 1783031 - 1783972 820 ## COG0524 Sugar kinases, ribokinase family - Prom 1784008 - 1784067 4.7 - Term 1784034 - 1784083 13.5 1795 798 Op 1 . - CDS 1784125 - 1790475 5529 ## COG1404 Subtilisin-like serine proteases 1796 798 Op 2 . - CDS 1790415 - 1790963 325 ## gi|229826669|ref|ZP_04452738.1| hypothetical protein GCWU000182_02045 1797 798 Op 3 . - CDS 1790993 - 1792717 1196 ## COG5263 FOG: Glucan-binding domain (YG repeat) - Prom 1792756 - 1792815 7.4 - Term 1792984 - 1793035 13.6 1798 799 Op 1 . - CDS 1793098 - 1795572 2431 ## COG4932 Predicted outer membrane protein - Prom 1795665 - 1795724 7.2 1799 799 Op 2 . - CDS 1795820 - 1798345 2103 ## COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - Prom 1798375 - 1798434 5.0 - Term 1798516 - 1798555 2.0 1800 800 Tu 1 . - CDS 1798591 - 1800267 1850 ## COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase - Prom 1800302 - 1800361 3.6 1801 801 Tu 1 . - CDS 1800393 - 1801472 985 ## COG0385 Predicted Na+-dependent transporter - Prom 1801495 - 1801554 5.0 1802 802 Op 1 . - CDS 1801609 - 1803489 1828 ## COG0441 Threonyl-tRNA synthetase 1803 802 Op 2 1/0.105 - CDS 1803567 - 1805021 1649 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases 1804 802 Op 3 26/0.000 - CDS 1805041 - 1807134 1437 ## PROTEIN SUPPORTED gi|62291006|ref|YP_222799.1| polynucleotide phosphorylase/polyadenylase - Prom 1807255 - 1807314 6.1 - Term 1807367 - 1807409 13.3 1805 803 Op 1 9/0.000 - CDS 1807418 - 1807684 427 ## PROTEIN SUPPORTED gi|227872009|ref|ZP_03990394.1| ribosomal protein S15 - Prom 1807835 - 1807894 5.5 - Term 1807789 - 1807840 9.3 1806 803 Op 2 . - CDS 1807913 - 1809544 350 ## PROTEIN SUPPORTED gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 1807 803 Op 3 4/0.029 - CDS 1809628 - 1810611 787 ## COG0618 Exopolyphosphatase-related proteins 1808 803 Op 4 32/0.000 - CDS 1810623 - 1811039 364 ## COG0858 Ribosome-binding factor A - Term 1811143 - 1811189 5.3 1809 803 Op 5 10/0.000 - CDS 1811196 - 1813862 2603 ## COG0532 Translation initiation factor 2 (IF-2; GTPase) 1810 803 Op 6 8/0.000 - CDS 1813846 - 1814172 388 ## PROTEIN SUPPORTED gi|227872004|ref|ZP_03990389.1| ribosomal protein L7/L12 1811 803 Op 7 22/0.000 - CDS 1814162 - 1814431 235 ## PROTEIN SUPPORTED gi|206900953|ref|YP_002250931.1| ribosomal protein L7Ae family protein 1812 803 Op 8 . - CDS 1814458 - 1815597 687 ## PROTEIN SUPPORTED gi|17988250|ref|NP_540884.1| transcription elongation factor NusA 1813 803 Op 9 . - CDS 1815663 - 1816025 414 ## Calni_1302 hypothetical protein - Prom 1816106 - 1816165 8.0 - TRNA 1816287 - 1816360 78.5 # Arg ACG 0 0 - Term 1816249 - 1816282 1.4 1814 804 Tu 1 . - CDS 1816461 - 1817714 1494 ## bpr_I0590 hypothetical protein - Prom 1817755 - 1817814 10.4 1815 805 Tu 1 . - CDS 1817823 - 1818581 296 ## PROTEIN SUPPORTED gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 - Prom 1818676 - 1818735 4.4 1816 806 Op 1 . - CDS 1818769 - 1819788 733 ## PROTEIN SUPPORTED gi|227425790|ref|ZP_03908856.1| SSU ribosomal protein S18P alanine acetyltransferase 1817 806 Op 2 . - CDS 1819804 - 1820709 628 ## COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III 1818 806 Op 3 20/0.000 - CDS 1820710 - 1821150 209 ## PROTEIN SUPPORTED gi|226224682|ref|YP_002758789.1| ribosomal protein alanine acetyltransferase 1819 806 Op 4 12/0.000 - CDS 1821172 - 1821939 876 ## COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone 1820 806 Op 5 . - CDS 1821936 - 1822364 538 ## COG0802 Predicted ATPase or kinase - Prom 1822485 - 1822544 4.0 1821 807 Op 1 . - CDS 1822687 - 1823940 1271 ## COG0460 Homoserine dehydrogenase 1822 807 Op 2 6/0.010 - CDS 1823958 - 1825094 1207 ## COG1186 Protein chain release factor B 1823 807 Op 3 . - CDS 1825147 - 1827735 2782 ## COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) - Prom 1827790 - 1827849 7.0 + Prom 1827887 - 1827946 8.6 1824 808 Tu 1 . + CDS 1827992 - 1828519 498 ## PROTEIN SUPPORTED gi|28210085|ref|NP_781029.1| SSU ribosomal protein S30P + Term 1828590 - 1828644 20.0 - Term 1828572 - 1828636 26.2 1825 809 Op 1 . - CDS 1828695 - 1829987 1127 ## Closa_0537 hypothetical protein 1826 809 Op 2 . - CDS 1830014 - 1830337 195 ## gi|227872849|ref|ZP_03991160.1| conserved hypothetical protein - Prom 1830411 - 1830470 1.6 - Term 1830377 - 1830420 3.3 1827 810 Tu 1 . - CDS 1830473 - 1832167 1904 ## COG1316 Transcriptional regulator 1828 811 Op 1 1/0.105 - CDS 1832308 - 1833723 1050 ## COG2148 Sugar transferases involved in lipopolysaccharide synthesis - Term 1833729 - 1833766 1.0 1829 811 Op 2 . - CDS 1833771 - 1834748 704 ## COG0657 Esterase/lipase - Prom 1834851 - 1834910 4.4 1830 812 Tu 1 . - CDS 1834981 - 1836237 1577 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - Prom 1836396 - 1836455 7.4 - Term 1836344 - 1836380 4.1 1831 813 Op 1 7/0.000 - CDS 1836606 - 1838276 1889 ## COG0366 Glycosidases 1832 813 Op 2 3/0.029 - CDS 1838348 - 1840093 1353 ## COG0366 Glycosidases - Term 1840106 - 1840137 -0.9 1833 813 Op 3 . - CDS 1840142 - 1841173 870 ## COG1609 Transcriptional regulators 1834 813 Op 4 38/0.000 - CDS 1841192 - 1842061 956 ## COG0395 ABC-type sugar transport system, permease component 1835 813 Op 5 . - CDS 1842061 - 1842978 680 ## COG1175 ABC-type sugar transport systems, permease components 1836 813 Op 6 . - CDS 1842789 - 1843160 62 ## 1837 813 Op 7 . - CDS 1843289 - 1844641 1488 ## COG1653 ABC-type sugar transport system, periplasmic component - Prom 1844802 - 1844861 12.8 1838 814 Tu 1 . - CDS 1844880 - 1845083 108 ## - Prom 1845145 - 1845204 2.0 - TRNA 1844980 - 1845053 86.5 # Asp GTC 0 0 - 5S_RRNA 1845419 - 1845680 96.0 # AF142677 [R:48033..48709] # 5S ribosomal RNA # Bacillus megaterium # Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus. - 5S_RRNA 1848366 - 1848455 92.0 # CP000885 [D:447851..447967] # 5S ribosomal RNA # Clostridium phytofermentans ISDg # Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium. - Term 1848268 - 1848297 -0.7 1839 815 Tu 1 . - CDS 1848401 - 1848589 111 ## - Prom 1848705 - 1848764 80.4 - SSU_RRNA 1848708 - 1850185 99.0 # AF481222 [D:1..1478] # 16S ribosomal RNA # Lachnospiraceae oral clone MCE10_236 # Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples. 1840 816 Op 1 . - CDS 1850640 - 1852202 1046 ## COG0673 Predicted dehydrogenases and related proteins 1841 816 Op 2 1/0.105 - CDS 1852220 - 1853494 1182 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases 1842 816 Op 3 26/0.000 - CDS 1853566 - 1854525 986 ## COG1079 Uncharacterized ABC-type transport system, permease component 1843 816 Op 4 24/0.000 - CDS 1854525 - 1855691 1172 ## COG4603 ABC-type uncharacterized transport system, permease component 1844 816 Op 5 15/0.000 - CDS 1855681 - 1857216 1713 ## COG3845 ABC-type uncharacterized transport systems, ATPase components - Term 1857227 - 1857267 9.5 1845 816 Op 6 . - CDS 1857290 - 1858492 1672 ## COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein - Term 1858507 - 1858539 -0.9 1846 817 Tu 1 . - CDS 1858597 - 1859703 1140 ## COG0182 Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family 1847 818 Op 1 . - CDS 1859787 - 1860629 942 ## COG0005 Purine nucleoside phosphorylase 1848 818 Op 2 . - CDS 1860645 - 1862021 1677 ## SpiBuddy_1532 hypothetical protein - Prom 1862242 - 1862301 75.6 + TRNA 1862227 - 1862298 61.7 # Arg CCG 0 0 + Prom 1862229 - 1862288 79.0 1849 819 Tu 1 . + CDS 1862426 - 1862719 81 ## 1850 820 Tu 1 . - CDS 1862773 - 1864437 1760 ## Closa_3778 hypothetical protein - Prom 1864573 - 1864632 4.5 - Term 1864486 - 1864516 1.8 1851 821 Op 1 . - CDS 1864645 - 1865739 525 ## COG2110 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 1852 821 Op 2 . - CDS 1865741 - 1866274 210 ## Slip_1960 hypothetical protein - Prom 1866298 - 1866357 6.9 - Term 1866666 - 1866706 3.2 1853 822 Tu 1 . - CDS 1866809 - 1867408 278 ## HMPREF0424_1212 hypothetical protein - Prom 1867476 - 1867535 5.6 1854 823 Tu 1 . - CDS 1867537 - 1868736 948 ## COG1373 Predicted ATPase (AAA+ superfamily) - Prom 1868841 - 1868900 6.6 1855 824 Tu 1 . - CDS 1868902 - 1869036 137 ## - Prom 1869060 - 1869119 4.5 + Prom 1869348 - 1869407 3.0 1856 825 Tu 1 . + CDS 1869597 - 1869932 195 ## COG3547 Transposase and inactivated derivatives + Term 1869988 - 1870023 -0.8 - Term 1870063 - 1870127 2.3 1857 826 Op 1 . - CDS 1870239 - 1871186 435 ## HNE_2073 hypothetical protein 1858 826 Op 2 . - CDS 1871198 - 1871395 107 ## 1859 826 Op 3 1/0.105 - CDS 1871371 - 1872771 737 ## COG1696 Predicted membrane protein involved in D-alanine export 1860 826 Op 4 . - CDS 1872773 - 1873126 328 ## COG0346 Lactoylglutathione lyase and related lyases 1861 826 Op 5 . - CDS 1873162 - 1873404 387 ## Hfelis_00140 acyl carrier protein 1862 826 Op 6 . - CDS 1873407 - 1875197 1515 ## COG3882 Predicted enzyme involved in methoxymalonyl-ACP biosynthesis - Prom 1875267 - 1875326 8.0 - Term 1875377 - 1875427 10.3 1863 827 Tu 1 . - CDS 1875441 - 1877030 1500 ## COG5263 FOG: Glucan-binding domain (YG repeat) - Prom 1877075 - 1877134 7.8 1864 828 Op 1 . - CDS 1877340 - 1878554 500 ## SUN_1091 hypothetical protein 1865 828 Op 2 . - CDS 1878608 - 1879579 402 ## SUN_1091 hypothetical protein 1866 828 Op 3 . - CDS 1879583 - 1880542 478 ## COG0464 ATPases of the AAA+ class - Prom 1880707 - 1880766 5.4 1867 829 Tu 1 . - CDS 1880840 - 1881367 201 ## 1868 830 Op 1 3/0.029 - CDS 1882087 - 1883286 870 ## COG0451 Nucleoside-diphosphate-sugar epimerases 1869 830 Op 2 3/0.029 - CDS 1883298 - 1884431 450 ## COG0381 UDP-N-acetylglucosamine 2-epimerase 1870 830 Op 3 . - CDS 1884503 - 1885570 867 ## COG1086 Predicted nucleoside-diphosphate sugar epimerases 1871 830 Op 4 . - CDS 1885650 - 1887659 964 ## COG2513 PEP phosphonomutase and related enzymes 1872 830 Op 5 . - CDS 1887691 - 1888686 476 ## TDE1432 hypothetical protein 1873 830 Op 6 . - CDS 1888686 - 1889129 304 ## Closa_0550 WxcM domain protein 1874 830 Op 7 1/0.105 - CDS 1889122 - 1889652 293 ## COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins 1875 830 Op 8 6/0.010 - CDS 1889657 - 1890754 588 ## COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 1876 830 Op 9 2/0.038 - CDS 1890770 - 1892188 374 ## COG2244 Membrane protein involved in the export of O-antigen and teichoic acid 1877 830 Op 10 . - CDS 1892249 - 1892812 427 ## COG1898 dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 1878 830 Op 11 2/0.038 - CDS 1892860 - 1893975 554 ## COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis - Term 1894005 - 1894046 -0.4 1879 830 Op 12 . - CDS 1894048 - 1894827 332 ## COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 1880 830 Op 13 . - CDS 1894859 - 1896106 405 ## Gmet_1327 hypothetical protein 1881 830 Op 14 . - CDS 1896103 - 1897020 426 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 1882 830 Op 15 . - CDS 1897046 - 1898305 582 ## 1883 830 Op 16 . - CDS 1898296 - 1899024 447 ## gi|169351153|ref|ZP_02868091.1| hypothetical protein CLOSPI_01932 1884 830 Op 17 . - CDS 1899024 - 1899554 156 ## gi|20560035|gb|AAM27784.1|AF498415_8 ORF_8 - Prom 1899580 - 1899639 2.3 1885 831 Tu 1 . - CDS 1899659 - 1900888 516 ## COG0438 Glycosyltransferase - Prom 1901016 - 1901075 2.6 1886 832 Op 1 . - CDS 1901091 - 1902641 383 ## COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) 1887 832 Op 2 5/0.019 - CDS 1902659 - 1903384 438 ## COG2148 Sugar transferases involved in lipopolysaccharide synthesis 1888 832 Op 3 . - CDS 1903435 - 1904634 714 ## COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis - Prom 1904773 - 1904832 1.6 1889 833 Op 1 . - CDS 1904850 - 1905110 150 ## COG4115 Uncharacterized protein conserved in bacteria 1890 833 Op 2 . - CDS 1905122 - 1905376 277 ## CCC13826_1068 addiction module antitoxin - Prom 1905414 - 1905473 6.4 1891 834 Op 1 . - CDS 1905496 - 1907250 1864 ## COG1154 Deoxyxylulose-5-phosphate synthase 1892 834 Op 2 . - CDS 1907327 - 1907896 471 ## Cbei_2682 hypothetical protein 1893 834 Op 3 . - CDS 1907893 - 1908663 549 ## COG0671 Membrane-associated phospholipid phosphatase 1894 834 Op 4 . - CDS 1908600 - 1908728 80 ## - TRNA 1908748 - 1908821 77.4 # Met CAT 0 0 - TRNA 1908905 - 1908977 86.7 # Val TAC 0 0 - 5S_RRNA 1908920 - 1908971 92.0 # AF302131 [D:490..741] # 5S ribosomal RNA # Streptococcus agalactiae # Bacteria; Firmicutes; Lactobacillales; Streptococcaceae; Streptococcus. - Term 1908963 - 1909000 1.9 1895 835 Op 1 . - CDS 1909115 - 1909843 604 ## COG3382 Uncharacterized conserved protein 1896 835 Op 2 . - CDS 1909882 - 1910523 758 ## Cphy_1674 redoxin domain-containing protein - Prom 1910584 - 1910643 3.7 1897 836 Op 1 . - CDS 1910660 - 1911895 908 ## COG0710 3-dehydroquinate dehydratase 1898 836 Op 2 . - CDS 1911985 - 1912533 334 ## COG2179 Predicted hydrolase of the HAD superfamily 1899 836 Op 3 . - CDS 1912530 - 1913006 443 ## COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains 1900 836 Op 4 . - CDS 1913003 - 1914277 180 ## PROTEIN SUPPORTED gi|118576132|ref|YP_875875.1| ribosomal protein L31E - Prom 1914335 - 1914394 1.8 - Term 1914319 - 1914377 10.1 1901 837 Op 1 22/0.000 - CDS 1914403 - 1915314 1184 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen - Prom 1915355 - 1915414 3.1 1902 837 Op 2 32/0.000 - CDS 1915431 - 1916096 790 ## COG2011 ABC-type metal ion transport system, permease component 1903 837 Op 3 1/0.105 - CDS 1916097 - 1917137 1152 ## COG1135 ABC-type metal ion transport system, ATPase component - Prom 1917170 - 1917229 1.7 1904 838 Op 1 . - CDS 1917260 - 1918642 1331 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 1905 838 Op 2 . - CDS 1918689 - 1920281 1635 ## COG4108 Peptide chain release factor RF-3 - Prom 1920333 - 1920392 5.3 - Term 1920422 - 1920456 6.0 1906 839 Tu 1 . - CDS 1920508 - 1921728 1255 ## COG0206 Cell division GTPase - Prom 1921790 - 1921849 6.2 1907 840 Op 1 . - CDS 1921854 - 1922597 693 ## Closa_2458 hypothetical protein 1908 840 Op 2 25/0.000 - CDS 1922600 - 1923742 1232 ## COG0772 Bacterial cell division membrane protein 1909 840 Op 3 28/0.000 - CDS 1923773 - 1925137 1558 ## COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase - Prom 1925207 - 1925266 1.9 1910 840 Op 4 4/0.029 - CDS 1925268 - 1926233 873 ## COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 1911 840 Op 5 . - CDS 1926249 - 1928348 2030 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 - Prom 1928391 - 1928450 2.6 - Term 1928415 - 1928451 2.3 1912 841 Tu 1 . - CDS 1928472 - 1929035 336 ## Closa_2465 hypothetical protein - Prom 1929123 - 1929182 2.5 1913 842 Op 1 29/0.000 - CDS 1929251 - 1930189 549 ## COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis 1914 842 Op 2 . - CDS 1930189 - 1930614 376 ## COG2001 Uncharacterized protein conserved in bacteria - Prom 1930746 - 1930805 9.0 - Term 1930777 - 1930811 4.0 1915 843 Op 1 . - CDS 1930905 - 1931999 1333 ## COG0012 Predicted GTPase, probable translation factor 1916 843 Op 2 . - CDS 1932023 - 1932130 85 ## 1917 843 Op 3 . - CDS 1932180 - 1932611 197 ## gi|291165687|gb|EFE27735.1| YihY family protein 1918 843 Op 4 . - CDS 1932637 - 1932777 70 ## 1919 843 Op 5 . - CDS 1932770 - 1933027 323 ## Selsp_0795 addiction module antitoxin, RelB/DinJ family - Prom 1933101 - 1933160 7.9 - Term 1933177 - 1933230 13.1 1920 844 Op 1 . - CDS 1933259 - 1934110 640 ## COG4296 Uncharacterized protein conserved in bacteria 1921 844 Op 2 . - CDS 1934132 - 1934479 368 ## Vpar_0724 hypothetical protein 1922 844 Op 3 . - CDS 1934543 - 1935160 641 ## COG0655 Multimeric flavodoxin WrbA - Prom 1935213 - 1935272 6.0 1923 845 Op 1 . - CDS 1935706 - 1936203 190 ## COG4268 McrBC 5-methylcytosine restriction system component - Term 1936231 - 1936273 -1.0 1924 845 Op 2 5/0.019 - CDS 1936299 - 1937009 279 ## COG4268 McrBC 5-methylcytosine restriction system component 1925 845 Op 3 . - CDS 1936990 - 1938984 897 ## COG1401 GTPase subunit of restriction endonuclease - Prom 1939060 - 1939119 9.0 - Term 1939133 - 1939167 1.7 1926 846 Tu 1 . - CDS 1939300 - 1940463 1245 ## COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family - Prom 1940515 - 1940574 4.2 - Term 1940880 - 1940924 8.1 1927 847 Tu 1 . - CDS 1941019 - 1942356 1246 ## Closa_3778 hypothetical protein - Prom 1942478 - 1942537 6.8 1928 848 Tu 1 . + CDS 1942826 - 1943587 592 ## COG3868 Uncharacterized conserved protein + Term 1943740 - 1943781 5.0 - TRNA 1943619 - 1943691 68.3 # Pro GGG 0 0 - Term 1943735 - 1943762 -0.1 1929 849 Tu 1 . - CDS 1943859 - 1945838 1998 ## Cthe_2357 hypothetical protein - Prom 1945872 - 1945931 4.6 1930 850 Tu 1 . - CDS 1946002 - 1947459 1385 ## COG1115 Na+/alanine symporter - Prom 1947589 - 1947648 5.1 - Term 1947560 - 1947593 3.1 1931 851 Tu 1 . - CDS 1947705 - 1948091 370 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - Prom 1948242 - 1948301 7.0 1932 852 Tu 1 . + CDS 1948409 - 1948645 306 ## Closa_2213 preprotein translocase, SecG subunit + Term 1948670 - 1948702 4.0 + Prom 1948648 - 1948707 7.0 1933 853 Op 1 10/0.000 + CDS 1948797 - 1951166 1389 ## PROTEIN SUPPORTED gi|15894003|ref|NP_347352.1| fused ribonuclease/ribosomal protein S1 + Prom 1951262 - 1951321 3.9 1934 853 Op 2 . + CDS 1951346 - 1951813 368 ## COG0691 tmRNA-binding protein + Term 1951985 - 1952021 -0.8 1935 854 Op 1 40/0.000 - CDS 1952823 - 1955246 2344 ## COG0072 Phenylalanyl-tRNA synthetase beta subunit 1936 854 Op 2 . - CDS 1955259 - 1956281 974 ## COG0016 Phenylalanyl-tRNA synthetase alpha subunit - Prom 1956302 - 1956361 3.8 + Prom 1956875 - 1956934 8.9 1937 855 Op 1 8/0.000 + CDS 1957053 - 1957715 372 ## COG1296 Predicted branched-chain amino acid permease (azaleucine resistance) 1938 855 Op 2 . + CDS 1957773 - 1958105 267 ## COG1687 Predicted branched-chain amino acid permeases (azaleucine resistance) - Term 1957854 - 1957880 -1.0 1939 856 Op 1 . - CDS 1958121 - 1960151 2147 ## COG2199 FOG: GGDEF domain 1940 856 Op 2 . - CDS 1960209 - 1961666 1180 ## CDR20291_0675 putative lipoprotein - Prom 1961815 - 1961874 9.2 + Prom 1961817 - 1961876 6.3 1941 857 Op 1 . + CDS 1961965 - 1962354 216 ## COG1815 Flagellar basal body protein 1942 857 Op 2 . + CDS 1962409 - 1962558 107 ## + Prom 1962643 - 1962702 2.1 1943 858 Op 1 20/0.000 + CDS 1962723 - 1964801 2260 ## COG0643 Chemotaxis protein histidine kinase and related kinases 1944 858 Op 2 5/0.019 + CDS 1964812 - 1965309 600 ## COG0835 Chemotaxis signal transduction protein 1945 858 Op 3 13/0.000 + CDS 1965321 - 1966136 433 ## COG1352 Methylase of chemotaxis methyl-accepting proteins + Term 1966143 - 1966202 6.2 + Prom 1966142 - 1966201 3.2 1946 858 Op 4 . + CDS 1966224 - 1966817 377 ## COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain 1947 858 Op 5 . + CDS 1966827 - 1968083 1274 ## Closa_3435 hypothetical protein + Term 1968098 - 1968149 16.6 - Term 1968271 - 1968304 3.5 1948 859 Tu 1 . - CDS 1968333 - 1968989 627 ## COG0840 Methyl-accepting chemotaxis protein - Prom 1969029 - 1969088 8.4 1949 860 Tu 1 . - CDS 1969216 - 1969305 90 ## 1950 861 Tu 1 . + CDS 1969285 - 1969737 385 ## gi|227873397|ref|ZP_03991654.1| hypothetical protein HMPREF6123_1593 + Term 1969964 - 1970001 -0.4 1951 862 Op 1 . - CDS 1969714 - 1971051 909 ## COG0210 Superfamily I DNA and RNA helicases - Term 1971059 - 1971100 4.1 1952 862 Op 2 . - CDS 1971106 - 1972044 1095 ## COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit - Prom 1972099 - 1972158 6.5 1953 863 Tu 1 . - CDS 1972166 - 1972444 359 ## Rumal_3364 helix-turn-helix domain protein - Prom 1972537 - 1972596 3.1 - TRNA 1972577 - 1972649 63.6 # Thr GGT 0 0 + Prom 1972798 - 1972857 9.1 1954 864 Tu 1 . + CDS 1972961 - 1974025 829 ## SGO_0803 hypothetical protein + Term 1974079 - 1974110 0.9 + Prom 1974071 - 1974130 1.6 1955 865 Tu 1 . + CDS 1974153 - 1974356 333 ## - Term 1974643 - 1974684 8.0 1956 866 Tu 1 . - CDS 1974731 - 1978669 3706 ## COG5263 FOG: Glucan-binding domain (YG repeat) - Prom 1978841 - 1978900 6.5 + Prom 1978884 - 1978943 9.3 1957 867 Tu 1 . + CDS 1979040 - 1981070 1648 ## COG4886 Leucine-rich repeat (LRR) protein + Term 1981112 - 1981175 20.1 - Term 1981102 - 1981161 8.2 1958 868 Tu 1 . - CDS 1981174 - 1981659 394 ## COG3467 Predicted flavin-nucleotide-binding protein - Prom 1981866 - 1981925 5.5 + Prom 1981686 - 1981745 4.0 1959 869 Op 1 . + CDS 1981830 - 1981922 71 ## 1960 869 Op 2 35/0.000 + CDS 1981952 - 1983694 240 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 1961 869 Op 3 . + CDS 1983691 - 1985427 221 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 1962 869 Op 4 . + CDS 1985474 - 1986058 526 ## FMG_1400 hypothetical protein 1963 869 Op 5 34/0.000 + CDS 1986076 - 1986822 359 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 1964 869 Op 6 . + CDS 1986842 - 1988275 996 ## COG1122 ABC-type cobalt transport system, ATPase component 1965 870 Tu 1 . - CDS 1988203 - 1988400 79 ## + Prom 1988353 - 1988412 6.5 1966 871 Op 1 . + CDS 1988547 - 1990712 1598 ## Pjdr2_6097 hypothetical protein 1967 871 Op 2 . + CDS 1990736 - 1991827 669 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 1968 872 Op 1 . + CDS 1991931 - 1993055 1110 ## COG4632 Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase 1969 872 Op 2 . + CDS 1993052 - 1993423 217 ## SSUBM407_1757 membrane protein + Term 1993459 - 1993502 14.0 - Term 1993447 - 1993490 14.0 1970 873 Op 1 . - CDS 1993587 - 1999916 5703 ## Balac_0261 hypothetical protein - Prom 2000014 - 2000073 2.6 - Term 1999987 - 2000033 -0.5 1971 873 Op 2 40/0.000 - CDS 2000145 - 2001392 940 ## COG0642 Signal transduction histidine kinase 1972 873 Op 3 . - CDS 2001385 - 2002062 675 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 2002093 - 2002152 4.8 + Prom 2002210 - 2002269 6.3 1973 874 Tu 1 . + CDS 2002334 - 2003731 1525 ## COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) + Term 2003764 - 2003817 9.2 + Prom 2003760 - 2003819 2.2 1974 875 Op 1 13/0.000 + CDS 2003894 - 2006092 2257 ## COG0840 Methyl-accepting chemotaxis protein + Term 2006183 - 2006221 5.5 + Prom 2006111 - 2006170 2.7 1975 875 Op 2 13/0.000 + CDS 2006314 - 2008512 2249 ## COG0840 Methyl-accepting chemotaxis protein + Term 2008592 - 2008642 13.1 + Prom 2008626 - 2008685 7.0 1976 876 Tu 1 . + CDS 2008768 - 2010972 2231 ## COG0840 Methyl-accepting chemotaxis protein + Prom 2011176 - 2011235 7.7 1977 877 Tu 1 . + CDS 2011296 - 2011655 322 ## gi|227872260|ref|ZP_03990619.1| hypothetical protein HMPREF6123_0558 1978 878 Op 1 2/0.038 - CDS 2011661 - 2012650 909 ## COG1609 Transcriptional regulators 1979 878 Op 2 . - CDS 2012668 - 2013540 656 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Term 2013552 - 2013588 5.1 1980 879 Op 1 14/0.000 - CDS 2013598 - 2014893 1430 ## COG1653 ABC-type sugar transport system, periplasmic component - Prom 2014961 - 2015020 5.0 1981 879 Op 2 38/0.000 - CDS 2015095 - 2015916 859 ## COG0395 ABC-type sugar transport system, permease component 1982 879 Op 3 . - CDS 2015913 - 2016788 965 ## COG1175 ABC-type sugar transport systems, permease components 1983 879 Op 4 2/0.038 - CDS 2016781 - 2019963 2557 ## COG3250 Beta-galactosidase/beta-glucuronidase - Prom 2019983 - 2020042 7.2 - Term 2020098 - 2020157 8.5 1984 880 Op 1 . - CDS 2020159 - 2021031 603 ## COG0169 Shikimate 5-dehydrogenase 1985 880 Op 2 . - CDS 2021111 - 2021785 577 ## COG3619 Predicted membrane protein 1986 880 Op 3 7/0.000 - CDS 2021801 - 2022541 627 ## PROTEIN SUPPORTED gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 1987 880 Op 4 8/0.000 - CDS 2022538 - 2022957 201 ## PROTEIN SUPPORTED gi|163764762|ref|ZP_02171816.1| ribosomal protein S13 1988 880 Op 5 . - CDS 2022942 - 2024360 1415 ## COG0215 Cysteinyl-tRNA synthetase - Prom 2024390 - 2024449 4.3 - Term 2024419 - 2024475 12.3 1989 881 Op 1 2/0.038 - CDS 2024520 - 2025932 1664 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 1990 881 Op 2 . - CDS 2026014 - 2026493 625 ## COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase - Term 2026536 - 2026564 -0.9 1991 881 Op 3 . - CDS 2026565 - 2027533 654 ## COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase 1992 881 Op 4 . - CDS 2027617 - 2029056 1470 ## COG0793 Periplasmic protease 1993 881 Op 5 4/0.029 - CDS 2029083 - 2030171 1385 ## COG2508 Regulator of polyketide synthase expression - Prom 2030301 - 2030360 6.9 - Term 2030338 - 2030380 3.2 1994 882 Tu 1 . - CDS 2030433 - 2031545 1319 ## COG3839 ABC-type sugar transport systems, ATPase components - Prom 2031711 - 2031770 7.1 1995 883 Op 1 . - CDS 2031848 - 2032513 637 ## COG2996 Uncharacterized protein conserved in bacteria 1996 883 Op 2 . - CDS 2032482 - 2033249 361 ## COG3884 Acyl-ACP thioesterase 1997 883 Op 3 . - CDS 2033266 - 2034387 918 ## COG0053 Predicted Co/Zn/Cd cation transporters - Term 2034400 - 2034452 7.4 1998 883 Op 4 . - CDS 2034482 - 2034934 532 ## COG1970 Large-conductance mechanosensitive channel - Prom 2034997 - 2035056 5.1 1999 884 Tu 1 . - CDS 2035059 - 2036219 1239 ## COG1820 N-acetylglucosamine-6-phosphate deacetylase - Prom 2036280 - 2036339 7.3 2000 885 Tu 1 . - CDS 2036438 - 2042599 5656 ## Shel_00090 Mg-chelatase subunit ChlD - Prom 2042670 - 2042729 6.5 - Term 2042782 - 2042819 -0.8 2001 886 Op 1 . - CDS 2042823 - 2044229 846 ## COG2872 Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain 2002 886 Op 2 . - CDS 2044317 - 2045777 1153 ## COG1640 4-alpha-glucanotransferase - Prom 2045802 - 2045861 2.9 - Term 2045830 - 2045875 11.4 2003 887 Op 1 19/0.000 - CDS 2045946 - 2046377 497 ## COG1781 Aspartate carbamoyltransferase, regulatory subunit - Prom 2046400 - 2046459 3.6 2004 887 Op 2 . - CDS 2046604 - 2047527 1098 ## COG0540 Aspartate carbamoyltransferase, catalytic chain 2005 888 Op 1 9/0.000 - CDS 2047656 - 2048291 758 ## COG0461 Orotate phosphoribosyltransferase 2006 888 Op 2 5/0.019 - CDS 2048389 - 2049153 721 ## COG0284 Orotidine-5'-phosphate decarboxylase 2007 888 Op 3 13/0.000 - CDS 2049166 - 2050074 1053 ## COG0167 Dihydroorotate dehydrogenase 2008 888 Op 4 3/0.029 - CDS 2050068 - 2050790 641 ## COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases - Prom 2050826 - 2050885 2.3 - Term 2050844 - 2050880 -0.7 2009 889 Tu 1 . - CDS 2050920 - 2052308 1080 ## COG0044 Dihydroorotase and related cyclic amidohydrolases - Prom 2052335 - 2052394 7.1 - Term 2052388 - 2052429 5.0 2010 890 Op 1 . - CDS 2052538 - 2052807 303 ## gi|227873453|ref|ZP_03991707.1| conserved hypothetical protein 2011 890 Op 2 3/0.029 - CDS 2052866 - 2053774 523 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 2053971 - 2054030 3.2 - Term 2053935 - 2053976 8.1 2012 891 Op 1 . - CDS 2054032 - 2056254 2180 ## COG0840 Methyl-accepting chemotaxis protein - Prom 2056362 - 2056421 2.9 2013 891 Op 2 . - CDS 2056423 - 2056974 556 ## COG0386 Glutathione peroxidase - Prom 2057111 - 2057170 11.8 2014 892 Op 1 . - CDS 2057298 - 2060030 1080 ## COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases 2015 892 Op 2 . - CDS 2060093 - 2060440 169 ## Fisuc_1347 type I site-specific deoxyribonuclease, HsdR family 2016 892 Op 3 . - CDS 2060430 - 2062358 599 ## HMPREF0868_1059 hypothetical protein 2017 892 Op 4 4/0.029 - CDS 2062370 - 2063035 175 ## COG0732 Restriction endonuclease S subunits 2018 892 Op 5 27/0.000 - CDS 2063041 - 2063529 186 ## COG0732 Restriction endonuclease S subunits 2019 892 Op 6 . - CDS 2063526 - 2065379 1110 ## COG0286 Type I restriction-modification system methyltransferase subunit 2020 892 Op 7 . - CDS 2065372 - 2066244 538 ## HS_1527 hypothetical protein - Prom 2066330 - 2066389 5.5 + Prom 2066093 - 2066152 4.5 2021 893 Op 1 . + CDS 2066301 - 2066486 91 ## 2022 893 Op 2 . + CDS 2066547 - 2067410 861 ## COG0313 Predicted methyltransferases + Term 2067424 - 2067471 1.2 - Term 2067412 - 2067458 11.6 2023 894 Op 1 . - CDS 2067508 - 2069997 1839 ## gi|227873462|ref|ZP_03991714.1| hypothetical protein HMPREF6123_1653 2024 894 Op 2 . - CDS 2069994 - 2075942 5413 ## bpr_I0894 LPxTG motif-containing cell surface protein - Prom 2076098 - 2076157 4.7 - Term 2076567 - 2076607 -0.0 2025 895 Op 1 . - CDS 2076615 - 2077469 495 ## Apre_0680 hypothetical protein 2026 895 Op 2 . - CDS 2077466 - 2078065 341 ## FMG_1594 hypothetical protein - Prom 2078085 - 2078144 7.7 - Term 2078112 - 2078174 6.5 2027 896 Op 1 . - CDS 2078175 - 2078408 336 ## Cphy_2846 hydroxylamine reductase 2028 896 Op 2 . - CDS 2078495 - 2079208 688 ## Closa_0328 Negative regulator of genetic competence - Prom 2079356 - 2079415 8.7 2029 897 Op 1 . - CDS 2079435 - 2080499 941 ## COG0305 Replicative DNA helicase 2030 897 Op 2 16/0.000 - CDS 2080511 - 2080789 197 ## COG0305 Replicative DNA helicase 2031 897 Op 3 9/0.000 - CDS 2080793 - 2081239 645 ## PROTEIN SUPPORTED gi|227873474|ref|ZP_03991724.1| ribosomal protein L9 2032 897 Op 4 . - CDS 2081239 - 2083161 670 ## PROTEIN SUPPORTED gi|194246575|ref|YP_002004214.1| 50S ribosomal protein L9 - Prom 2083192 - 2083251 2.4 2033 898 Tu 1 . - CDS 2083309 - 2083377 91 ## - Prom 2083548 - 2083607 5.1 + Prom 2083475 - 2083534 6.2 2034 899 Tu 1 . + CDS 2083585 - 2084091 567 ## Closa_1057 hypothetical protein - Term 2083999 - 2084043 0.6 2035 900 Tu 1 . - CDS 2084226 - 2085668 1175 ## gi|227873480|ref|ZP_03991729.1| hypothetical protein HMPREF6123_1668 - Prom 2085713 - 2085772 3.5 - Term 2085724 - 2085779 1.1 2036 901 Tu 1 . - CDS 2085830 - 2087089 1032 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases - Term 2087107 - 2087141 -0.9 2037 902 Tu 1 . - CDS 2087204 - 2088562 1334 ## COG2252 Permeases - Prom 2088584 - 2088643 4.5 + Prom 2088757 - 2088816 9.2 2038 903 Tu 1 . + CDS 2088958 - 2090670 1179 ## COG1001 Adenine deaminase + Prom 2090679 - 2090738 9.2 2039 904 Tu 1 . + CDS 2090782 - 2091435 621 ## LM5578_2661 hypothetical protein - Term 2091477 - 2091514 6.0 2040 905 Tu 1 . - CDS 2091569 - 2097217 5647 ## FMG_P0126 hypothetical protein - Prom 2097336 - 2097395 7.0 + Prom 2097334 - 2097393 8.7 2041 906 Op 1 . + CDS 2097606 - 2098676 1090 ## Vpar_0343 hypothetical protein 2042 906 Op 2 . + CDS 2098678 - 2098887 212 ## gi|291458391|ref|ZP_06597781.1| hypothetical cytosolic protein 2043 906 Op 3 . + CDS 2098889 - 2099152 243 ## Vpar_0344 hypothetical protein + Term 2099165 - 2099205 5.1 - Term 2099153 - 2099193 9.7 2044 907 Op 1 . - CDS 2099295 - 2100113 901 ## gi|227874480|ref|ZP_03992655.1| conserved hypothetical protein 2045 907 Op 2 . - CDS 2100134 - 2100835 766 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases - Prom 2100926 - 2100985 5.5 - Term 2101089 - 2101135 14.3 2046 908 Op 1 21/0.000 - CDS 2101226 - 2102362 235 ## PROTEIN SUPPORTED gi|167854980|ref|ZP_02477755.1| 50S ribosomal protein L13 - Prom 2102408 - 2102467 3.4 2047 908 Op 2 17/0.000 - CDS 2102478 - 2104124 1693 ## COG1178 ABC-type Fe3+ transport system, permease component 2048 908 Op 3 . - CDS 2104121 - 2105236 1219 ## COG3842 ABC-type spermidine/putrescine transport systems, ATPase components - Prom 2105311 - 2105370 6.7 + Prom 2105130 - 2105189 4.7 2049 909 Tu 1 . + CDS 2105210 - 2105293 56 ## + Term 2105314 - 2105350 3.5 2050 910 Op 1 . - CDS 2105521 - 2105730 156 ## COG3326 Predicted membrane protein 2051 910 Op 2 . - CDS 2105721 - 2105990 374 ## 2052 910 Op 3 . - CDS 2106033 - 2106656 481 ## COG0406 Fructose-2,6-bisphosphatase 2053 910 Op 4 . - CDS 2106679 - 2108109 1312 ## COG2509 Uncharacterized FAD-dependent dehydrogenases - Prom 2108155 - 2108214 5.0 - Term 2108195 - 2108234 1.1 2054 911 Op 1 5/0.019 - CDS 2108371 - 2109519 1513 ## COG1454 Alcohol dehydrogenase, class IV 2055 911 Op 2 . - CDS 2109548 - 2110204 628 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases - Prom 2110366 - 2110425 7.9 + Prom 2110287 - 2110346 5.8 2056 912 Tu 1 . + CDS 2110409 - 2111362 913 ## gi|227873185|ref|ZP_03991472.1| hypothetical protein HMPREF6123_1411 + Term 2111456 - 2111501 10.1 - Term 2111438 - 2111495 14.7 2057 913 Op 1 . - CDS 2111589 - 2113295 1770 ## COG1164 Oligoendopeptidase F 2058 913 Op 2 . - CDS 2113256 - 2113351 69 ## - Prom 2113412 - 2113471 5.7 - Term 2113379 - 2113432 15.1 2059 914 Op 1 . - CDS 2113492 - 2113866 112 ## HMPREF0421_20941 hypothetical protein 2060 914 Op 2 . - CDS 2113894 - 2114136 217 ## HMPREF0421_20942 hypothetical protein - Prom 2114174 - 2114233 5.9 2061 915 Tu 1 . - CDS 2114242 - 2115612 777 ## COG1373 Predicted ATPase (AAA+ superfamily) - Prom 2115671 - 2115730 5.5 - Term 2115918 - 2115956 1.3 2062 916 Op 1 . - CDS 2116017 - 2116646 604 ## COG2323 Predicted membrane protein 2063 916 Op 2 . - CDS 2116737 - 2118401 1530 ## COG1164 Oligoendopeptidase F 2064 916 Op 3 . - CDS 2118443 - 2118796 246 ## EUBREC_1122 hypothetical protein 2065 917 Op 1 11/0.000 - CDS 2118901 - 2121288 2259 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 2066 917 Op 2 5/0.019 - CDS 2121293 - 2122390 1004 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 2067 917 Op 3 . - CDS 2122449 - 2123708 969 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 2068 918 Op 1 . - CDS 2123810 - 2125039 1095 ## COG0500 SAM-dependent methyltransferases 2069 918 Op 2 . - CDS 2125091 - 2126251 751 ## Closa_0572 NAD-dependent epimerase/dehydratase 2070 918 Op 3 . - CDS 2126252 - 2128435 2208 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 2071 918 Op 4 . - CDS 2128440 - 2129282 623 ## gi|227871756|ref|ZP_03990162.1| hypothetical protein HMPREF6123_0101 2072 918 Op 5 8/0.000 - CDS 2129365 - 2130126 553 ## COG0101 Pseudouridylate synthase - Prom 2130162 - 2130221 5.2 2073 918 Op 6 34/0.000 - CDS 2130308 - 2131114 777 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 2074 918 Op 7 . - CDS 2131107 - 2133032 384 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P - Term 2133073 - 2133115 8.5 2075 918 Op 8 . - CDS 2133119 - 2134207 1074 ## COG2206 HD-GYP domain - Prom 2134345 - 2134404 6.6 - Term 2134337 - 2134374 4.1 2076 919 Op 1 . - CDS 2134466 - 2136136 1086 ## Closa_4081 hypothetical protein 2077 919 Op 2 . - CDS 2136141 - 2137100 727 ## COG0647 Predicted sugar phosphatases of the HAD superfamily - Prom 2137169 - 2137228 5.6 - Term 2137178 - 2137216 6.5 2078 920 Tu 1 . - CDS 2137277 - 2138320 1129 ## COG0208 Ribonucleotide reductase, beta subunit - Prom 2138393 - 2138452 3.6 - Term 2138457 - 2138505 -0.1 2079 921 Tu 1 . - CDS 2138628 - 2141138 2637 ## COG0209 Ribonucleotide reductase, alpha subunit 2080 922 Tu 1 . - CDS 2141537 - 2141887 359 ## DSY1255 hypothetical protein - Prom 2141933 - 2141992 5.8 + Prom 2142289 - 2142348 2.6 2081 923 Tu 1 . + CDS 2142378 - 2142677 146 ## 2082 924 Op 1 . - CDS 2143289 - 2144020 542 ## COG2176 DNA polymerase III, alpha subunit (gram-positive type) 2083 924 Op 2 . - CDS 2144011 - 2144967 481 ## COG1518 Uncharacterized protein predicted to be involved in DNA repair 2084 924 Op 3 . - CDS 2144972 - 2145604 362 ## HMPREF0424_0764 CRISPR system CASCADE complex protein CasE - Prom 2145682 - 2145741 2.4 - Term 2145708 - 2145747 -0.3 2085 925 Op 1 . - CDS 2145792 - 2146355 187 ## SmuNN2025_0607 hypothetical protein 2086 925 Op 2 . - CDS 2146366 - 2147445 616 ## HMPREF0421_20673 CSE4 family CRISPR-associated protein 2087 925 Op 3 . - CDS 2147438 - 2148040 458 ## SmuNN2025_0605 hypothetical protein 2088 925 Op 4 . - CDS 2148054 - 2149763 530 ## HMPREF0421_20671 CSE1 family CRISPR-associated protein 2089 925 Op 5 . - CDS 2149767 - 2151296 758 ## COG1203 Predicted helicases 2090 925 Op 6 . - CDS 2151326 - 2152585 712 ## COG1203 Predicted helicases - Prom 2152690 - 2152749 10.5 + Prom 2152625 - 2152684 13.2 2091 926 Tu 1 . + CDS 2152916 - 2153800 500 ## Selsp_0303 hypothetical protein + Term 2153802 - 2153845 1.4 - Term 2153991 - 2154038 1.1 2092 927 Tu 1 . - CDS 2154063 - 2155295 1313 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase - Term 2155316 - 2155346 4.3 2093 928 Op 1 22/0.000 - CDS 2155381 - 2156289 1146 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen 2094 928 Op 2 32/0.000 - CDS 2156328 - 2157008 899 ## COG2011 ABC-type metal ion transport system, permease component 2095 928 Op 3 . - CDS 2156996 - 2158063 1111 ## COG1135 ABC-type metal ion transport system, ATPase component - Prom 2158174 - 2158233 7.5 2096 929 Op 1 . - CDS 2158262 - 2159257 708 ## COG4509 Uncharacterized protein conserved in bacteria 2097 929 Op 2 . - CDS 2159258 - 2159848 451 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 2098 929 Op 3 . - CDS 2159743 - 2160573 331 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase - Prom 2160616 - 2160675 3.8 - Term 2160696 - 2160725 2.1 2099 930 Tu 1 . - CDS 2160748 - 2161038 255 ## gi|227873618|ref|ZP_03991856.1| conserved hypothetical protein - Prom 2161115 - 2161174 3.5 2100 931 Op 1 . - CDS 2161178 - 2162230 1080 ## COG2333 Predicted hydrolase (metallo-beta-lactamase superfamily) 2101 931 Op 2 1/0.105 - CDS 2162252 - 2163568 1406 ## COG5263 FOG: Glucan-binding domain (YG repeat) 2102 931 Op 3 . - CDS 2163614 - 2164465 658 ## COG5263 FOG: Glucan-binding domain (YG repeat) 2103 931 Op 4 . - CDS 2164516 - 2165016 413 ## Olsu_0378 glycoside hydrolase family 25 - Prom 2165043 - 2165102 4.2 - Term 2165268 - 2165301 -0.9 2104 932 Tu 1 . - CDS 2165415 - 2166035 391 ## COG0791 Cell wall-associated hydrolases (invasion-associated proteins) - Prom 2166198 - 2166257 8.1 2105 933 Op 1 . - CDS 2166267 - 2166938 589 ## COG2364 Predicted membrane protein 2106 933 Op 2 . - CDS 2166985 - 2168355 1166 ## COG1376 Uncharacterized protein conserved in bacteria 2107 933 Op 3 9/0.000 - CDS 2168421 - 2169344 864 ## COG1760 L-serine deaminase 2108 933 Op 4 . - CDS 2169386 - 2170054 681 ## COG1760 L-serine deaminase - Prom 2170090 - 2170149 4.8 2109 934 Tu 1 . - CDS 2170183 - 2171388 1077 ## COG1301 Na+/H+-dicarboxylate symporters - Prom 2171478 - 2171537 6.1 - Term 2171434 - 2171473 8.2 2110 935 Op 1 . - CDS 2171552 - 2173342 2142 ## COG3808 Inorganic pyrophosphatase 2111 935 Op 2 . - CDS 2173300 - 2173539 102 ## COG3808 Inorganic pyrophosphatase 2112 935 Op 3 . - CDS 2173536 - 2173607 62 ## 2113 935 Op 4 . - CDS 2173654 - 2174178 283 ## Closa_0596 peptidase A8 signal peptidase II 2114 935 Op 5 . - CDS 2174165 - 2175232 887 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 2115 935 Op 6 . - CDS 2175245 - 2176288 487 ## PROTEIN SUPPORTED gi|229845805|ref|ZP_04465917.1| 50S ribosomal protein L31 2116 935 Op 7 . - CDS 2176305 - 2176850 418 ## COG1971 Predicted membrane protein 2117 935 Op 8 . - CDS 2176838 - 2177335 436 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - Prom 2177402 - 2177461 7.7 2118 936 Op 1 . + CDS 2177662 - 2178057 147 ## 2119 936 Op 2 . + CDS 2178099 - 2179187 600 ## COG1192 ATPases involved in chromosome partitioning 2120 936 Op 3 . + CDS 2179199 - 2179522 212 ## Closa_0132 type II secretion system protein E 2121 936 Op 4 8/0.000 + CDS 2179471 - 2180364 745 ## COG4962 Flp pilus assembly protein, ATPase CpaF 2122 936 Op 5 . + CDS 2180264 - 2181091 618 ## COG4965 Flp pilus assembly protein TadB + Prom 2181096 - 2181155 3.3 2123 937 Tu 1 . + CDS 2181200 - 2182624 848 ## Closa_0134 hypothetical protein + Term 2182720 - 2182768 -0.4 + Prom 2182651 - 2182710 6.2 2124 938 Op 1 . + CDS 2182829 - 2183068 264 ## gi|227871819|ref|ZP_03990221.1| hypothetical protein HMPREF6123_0160 2125 938 Op 2 . + CDS 2183107 - 2185140 1089 ## Closa_0136 hypothetical protein 2126 939 Tu 1 . - CDS 2185102 - 2185224 115 ## - Prom 2185460 - 2185519 4.3 2127 940 Op 1 . + CDS 2185217 - 2185948 374 ## Closa_0137 hypothetical protein 2128 940 Op 2 . + CDS 2185972 - 2186475 29 ## 2129 940 Op 3 . + CDS 2186492 - 2186746 123 ## 2130 940 Op 4 . + CDS 2186788 - 2187918 642 ## gi|227871824|ref|ZP_03990226.1| hypothetical protein HMPREF6123_0165 2131 941 Op 1 . - CDS 2187957 - 2189735 1253 ## COG2200 FOG: EAL domain 2132 941 Op 2 . - CDS 2189790 - 2190482 582 ## COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 2133 941 Op 3 . - CDS 2190476 - 2191018 178 ## PROTEIN SUPPORTED gi|163764517|ref|ZP_02171573.1| ribosomal protein L32 2134 941 Op 4 . - CDS 2191046 - 2192047 682 ## COG1482 Phosphomannose isomerase 2135 941 Op 5 . - CDS 2192089 - 2194803 2211 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) - Term 2194811 - 2194853 11.1 2136 942 Tu 1 . - CDS 2194897 - 2196447 1716 ## COG1418 Predicted HD superfamily hydrolase - Prom 2196508 - 2196567 3.9 2137 943 Op 1 . - CDS 2196586 - 2198043 1197 ## EUBELI_01824 hypothetical protein 2138 943 Op 2 . - CDS 2198040 - 2198129 90 ## - Prom 2198151 - 2198210 4.6 2139 944 Tu 1 . - CDS 2198229 - 2200016 858 ## COG1696 Predicted membrane protein involved in D-alanine export - Prom 2200123 - 2200182 3.9 - Term 2200363 - 2200404 -0.5 2140 945 Op 1 . - CDS 2200508 - 2201362 571 ## COG0084 Mg-dependent DNase 2141 945 Op 2 . - CDS 2201375 - 2202151 539 ## Closa_0158 hypothetical protein 2142 945 Op 3 . - CDS 2202153 - 2204210 2168 ## COG0143 Methionyl-tRNA synthetase - Prom 2204255 - 2204314 4.0 - Term 2204297 - 2204338 8.1 2143 946 Op 1 . - CDS 2204384 - 2204800 392 ## gi|227871840|ref|ZP_03990241.1| hypothetical protein HMPREF6123_0180 2144 946 Op 2 . - CDS 2204828 - 2205310 670 ## gi|227871841|ref|ZP_03990242.1| hypothetical protein HMPREF6123_0181 2145 946 Op 3 . - CDS 2205371 - 2207074 1103 ## COG5263 FOG: Glucan-binding domain (YG repeat) - Prom 2207207 - 2207266 4.4 - Term 2207460 - 2207500 -1.0 2146 947 Tu 1 . - CDS 2207512 - 2208807 1575 ## COG0148 Enolase - Prom 2208853 - 2208912 6.0 2147 948 Op 1 1/0.105 - CDS 2208967 - 2210244 234 ## PROTEIN SUPPORTED gi|171319301|ref|ZP_02908414.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 2148 948 Op 2 . - CDS 2210259 - 2211230 861 ## COG3872 Predicted metal-dependent enzyme - Prom 2211417 - 2211476 5.8 - Term 2211448 - 2211498 5.7 2149 949 Op 1 . - CDS 2211499 - 2211702 314 ## PROTEIN SUPPORTED gi|238923857|ref|YP_002937373.1| ribosomal protein L31 - Prom 2211794 - 2211853 2.3 2150 949 Op 2 . - CDS 2211929 - 2213392 1839 ## COG0516 IMP dehydrogenase/GMP reductase - Prom 2213439 - 2213498 4.3 2151 950 Tu 1 . - CDS 2213538 - 2214752 1085 ## COG1373 Predicted ATPase (AAA+ superfamily) - Prom 2214933 - 2214992 5.1 2152 951 Op 1 . - CDS 2215177 - 2218296 3358 ## COG1472 Beta-glucosidase-related glycosidases 2153 951 Op 2 . - CDS 2218383 - 2218883 505 ## BAD_1597 PTS system cellobiose-specific IIC component 2154 951 Op 3 . - CDS 2218871 - 2221324 2481 ## COG1472 Beta-glucosidase-related glycosidases - Prom 2221488 - 2221547 8.0 - Term 2221815 - 2221859 1.0 2155 952 Op 1 . - CDS 2221887 - 2222141 144 ## 2156 952 Op 2 . - CDS 2222159 - 2222470 178 ## 2157 952 Op 3 . - CDS 2222460 - 2222795 112 ## LMOf2365_1114 ABC transporter, permease protein - Prom 2222851 - 2222910 6.5 + Prom 2223295 - 2223354 6.0 2158 953 Tu 1 . + CDS 2223385 - 2223492 176 ## 2159 954 Op 1 17/0.000 - CDS 2223616 - 2224860 929 ## COG0151 Phosphoribosylamine-glycine ligase - Prom 2224888 - 2224947 3.0 2160 954 Op 2 10/0.000 - CDS 2225009 - 2226526 1515 ## COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) 2161 954 Op 3 . - CDS 2226523 - 2227128 522 ## COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN 2162 954 Op 4 . - CDS 2227125 - 2230796 2810 ## COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain 2163 955 Op 1 13/0.000 - CDS 2230920 - 2231936 817 ## PROTEIN SUPPORTED gi|169632702|ref|YP_001706438.1| phosphoribosylaminoimidazole synthetase 2164 955 Op 2 . - CDS 2231927 - 2233216 1202 ## COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase 2165 955 Op 3 4/0.029 - CDS 2233227 - 2233706 577 ## COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase - Prom 2233831 - 2233890 2.6 2166 956 Tu 1 . - CDS 2233966 - 2234655 850 ## COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase - Prom 2234859 - 2234918 4.7 - Term 2234933 - 2234973 -0.7 2167 957 Tu 1 . - CDS 2235030 - 2235848 694 ## COG1189 Predicted rRNA methylase - Prom 2235898 - 2235957 2.6 - Term 2235981 - 2236014 0.7 2168 958 Op 1 . - CDS 2236032 - 2236241 282 ## Lebu_0827 hypothetical protein 2169 958 Op 2 . - CDS 2236234 - 2236488 180 ## Tresu_1092 hypothetical protein 2170 958 Op 3 . - CDS 2236485 - 2236961 274 ## Lebu_0829 hypothetical protein - Prom 2237000 - 2237059 5.5 - Term 2237241 - 2237281 4.1 2171 959 Op 1 13/0.000 - CDS 2237360 - 2239234 1974 ## COG1154 Deoxyxylulose-5-phosphate synthase 2172 959 Op 2 . - CDS 2239295 - 2240302 851 ## COG0142 Geranylgeranyl pyrophosphate synthase 2173 959 Op 3 . - CDS 2240302 - 2240595 410 ## - Prom 2240615 - 2240674 3.0 2174 960 Op 1 1/0.105 - CDS 2240710 - 2242119 1315 ## COG1570 Exonuclease VII, large subunit 2175 960 Op 2 10/0.000 - CDS 2242123 - 2242665 503 ## COG0781 Transcription termination factor 2176 960 Op 3 . - CDS 2242658 - 2243035 523 ## COG1302 Uncharacterized protein conserved in bacteria - Prom 2243070 - 2243129 8.6 2177 961 Op 1 . - CDS 2243147 - 2245471 1244 ## COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases 2178 961 Op 2 . - CDS 2245488 - 2246345 352 ## COG0627 Predicted esterase 2179 961 Op 3 38/0.000 - CDS 2246349 - 2247185 560 ## COG0395 ABC-type sugar transport system, permease component 2180 961 Op 4 35/0.000 - CDS 2247182 - 2248033 453 ## COG1175 ABC-type sugar transport systems, permease components - Prom 2248074 - 2248133 3.4 - Term 2248197 - 2248247 11.3 2181 961 Op 5 . - CDS 2248279 - 2249685 1319 ## COG1653 ABC-type sugar transport system, periplasmic component - Prom 2249772 - 2249831 6.7 2182 962 Op 1 . - CDS 2249935 - 2250060 121 ## 2183 962 Op 2 . - CDS 2250129 - 2250506 320 ## Arch_1039 hypothetical protein 2184 962 Op 3 40/0.000 - CDS 2250527 - 2251903 1111 ## COG0642 Signal transduction histidine kinase 2185 962 Op 4 . - CDS 2251927 - 2252580 598 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 2186 962 Op 5 . - CDS 2252582 - 2253514 818 ## COG0348 Polyferredoxin 2187 962 Op 6 . - CDS 2253507 - 2253659 91 ## gi|227874129|ref|ZP_03992335.1| hypothetical protein HMPREF6123_2274 2188 963 Tu 1 . - CDS 2253767 - 2254966 1477 ## FMG_0299 hypothetical protein - Prom 2255110 - 2255169 6.6 2189 964 Tu 1 . - CDS 2255182 - 2256033 483 ## HMPREF0424_1228 hypothetical protein - Prom 2256057 - 2256116 2.7 + Prom 2256201 - 2256260 1.6 2190 965 Op 1 39/0.000 + CDS 2256298 - 2257299 1136 ## COG0226 ABC-type phosphate transport system, periplasmic component + Term 2257365 - 2257395 -0.7 + Prom 2257348 - 2257407 5.2 2191 965 Op 2 4/0.029 + CDS 2257442 - 2259346 1245 ## COG0573 ABC-type phosphate transport system, permease component + Prom 2259373 - 2259432 4.0 2192 966 Tu 1 . + CDS 2259519 - 2260295 231 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein + Term 2260494 - 2260536 -0.4 2193 967 Tu 1 . - CDS 2260320 - 2262251 1729 ## COG0840 Methyl-accepting chemotaxis protein - Term 2262701 - 2262761 24.2 2194 968 Op 1 16/0.000 - CDS 2262763 - 2263800 1066 ## COG1879 ABC-type sugar transport system, periplasmic component 2195 968 Op 2 11/0.000 - CDS 2263880 - 2264893 705 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 2196 968 Op 3 21/0.000 - CDS 2264906 - 2265808 695 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components - Prom 2265863 - 2265922 1.8 2197 968 Op 4 2/0.038 - CDS 2265933 - 2267426 176 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 - Prom 2267463 - 2267522 1.6 2198 969 Op 1 1/0.105 - CDS 2267531 - 2269084 1089 ## COG1070 Sugar (pentulose and hexulose) kinases 2199 969 Op 2 3/0.029 - CDS 2269145 - 2270584 666 ## COG1070 Sugar (pentulose and hexulose) kinases 2200 969 Op 3 5/0.019 - CDS 2270586 - 2271434 537 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 2201 969 Op 4 . - CDS 2271498 - 2272745 753 ## COG4806 L-rhamnose isomerase - Prom 2272895 - 2272954 5.5 - Term 2272993 - 2273049 15.5 2202 970 Op 1 . - CDS 2273106 - 2273465 244 ## Tthe_2726 transposase - Prom 2273490 - 2273549 1.8 2203 970 Op 2 2/0.038 - CDS 2273559 - 2275145 1364 ## COG1070 Sugar (pentulose and hexulose) kinases - Prom 2275307 - 2275366 6.9 2204 971 Tu 1 1/0.105 - CDS 2275405 - 2276343 579 ## COG0524 Sugar kinases, ribokinase family - Prom 2276401 - 2276460 4.4 - Term 2276595 - 2276642 10.1 2205 972 Op 1 6/0.010 - CDS 2276665 - 2277552 756 ## COG1830 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes 2206 972 Op 2 16/0.000 - CDS 2277612 - 2278769 1134 ## COG1879 ABC-type sugar transport system, periplasmic component 2207 972 Op 3 11/0.000 - CDS 2278829 - 2279851 787 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 2208 972 Op 4 21/0.000 - CDS 2279848 - 2280867 959 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 2209 972 Op 5 . - CDS 2280864 - 2282405 202 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 - Prom 2282448 - 2282507 5.8 + Prom 2282620 - 2282679 7.3 2210 973 Op 1 5/0.019 + CDS 2282722 - 2283636 733 ## COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain 2211 973 Op 2 1/0.105 + CDS 2283665 - 2285239 1100 ## COG1070 Sugar (pentulose and hexulose) kinases 2212 973 Op 3 . + CDS 2285272 - 2285625 613 ## COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain + Term 2285654 - 2285699 2.2 - Term 2285642 - 2285687 0.5 2213 974 Tu 1 . - CDS 2285778 - 2287319 1192 ## COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen - Prom 2287346 - 2287405 5.8 2214 975 Tu 1 . - CDS 2287529 - 2287921 394 ## COG3328 Transposase and inactivated derivatives - Prom 2287945 - 2288004 5.3 2215 976 Op 1 16/0.000 - CDS 2288071 - 2289096 1133 ## COG1879 ABC-type sugar transport system, periplasmic component 2216 976 Op 2 21/0.000 - CDS 2289166 - 2290122 761 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 2217 976 Op 3 9/0.000 - CDS 2290119 - 2291612 187 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 2218 976 Op 4 6/0.010 - CDS 2291627 - 2292025 377 ## COG1869 ABC-type ribose transport system, auxiliary component 2219 976 Op 5 13/0.000 - CDS 2292027 - 2292956 891 ## COG0524 Sugar kinases, ribokinase family - Prom 2292984 - 2293043 4.3 2220 976 Op 6 . - CDS 2293081 - 2294082 639 ## COG1609 Transcriptional regulators - Prom 2294183 - 2294242 13.9 - Term 2294218 - 2294264 11.1 2221 977 Op 1 10/0.000 - CDS 2294284 - 2294898 686 ## COG2376 Dihydroxyacetone kinase 2222 977 Op 2 . - CDS 2294933 - 2295940 1074 ## COG2376 Dihydroxyacetone kinase 2223 977 Op 3 18/0.000 - CDS 2295969 - 2296694 197 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 2224 977 Op 4 19/0.000 - CDS 2296696 - 2297475 249 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 2225 977 Op 5 24/0.000 - CDS 2297506 - 2298498 835 ## COG4177 ABC-type branched-chain amino acid transport system, permease component 2226 977 Op 6 20/0.000 - CDS 2298495 - 2299370 854 ## COG0559 Branched-chain amino acid ABC-type transport system, permease components 2227 977 Op 7 . - CDS 2299457 - 2300677 1346 ## COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component - Prom 2300758 - 2300817 3.2 2228 978 Op 1 . - CDS 2300838 - 2301860 748 ## SOR_1721 uroporphyrinogen decarboxylase family protein 2229 978 Op 2 1/0.105 - CDS 2301946 - 2302596 211 ## COG1802 Transcriptional regulators - Prom 2302645 - 2302704 9.9 - Term 2302721 - 2302753 4.2 2230 979 Op 1 . - CDS 2302817 - 2304058 1383 ## COG0471 Di- and tricarboxylate transporters 2231 979 Op 2 . - CDS 2304055 - 2305086 1011 ## BLJ_1395 hypothetical protein - Prom 2305150 - 2305209 9.3 - Term 2305191 - 2305232 3.0 2232 980 Tu 1 . - CDS 2305256 - 2307796 2571 ## COG0466 ATP-dependent Lon protease, bacterial type + Prom 2308104 - 2308163 4.8 2233 981 Tu 1 . + CDS 2308184 - 2308264 66 ## 2234 982 Tu 1 . + CDS 2308395 - 2308703 123 ## Dred_1551 hypothetical protein + Term 2308733 - 2308765 -0.6 + Prom 2308769 - 2308828 3.9 2235 983 Op 1 . + CDS 2308853 - 2309047 226 ## EUBREC_1094 hypothetical protein 2236 983 Op 2 . + CDS 2309050 - 2309472 319 ## COG1598 Uncharacterized conserved protein 2237 983 Op 3 . + CDS 2309486 - 2309746 247 ## Selsp_0513 hypothetical protein 2238 983 Op 4 . + CDS 2309762 - 2309998 201 ## Selsp_0514 Protein of unknown function DUF2442 2239 983 Op 5 . + CDS 2310008 - 2310127 116 ## + Term 2310377 - 2310418 2.5 - TRNA 2310227 - 2310314 69.6 # Ser CGA 0 0 - TRNA 2310375 - 2310463 61.4 # Leu TAA 0 0 - Term 2310327 - 2310369 5.9 2240 984 Tu 1 . - CDS 2310595 - 2311593 1178 ## Lebu_1608 membrane associated protein - Prom 2311689 - 2311748 7.1 - Term 2311730 - 2311787 17.7 2241 985 Tu 1 . - CDS 2311835 - 2313316 1524 ## COG1012 NAD-dependent aldehyde dehydrogenases - Prom 2313546 - 2313605 8.1 2242 986 Op 1 . - CDS 2313651 - 2315624 1521 ## EUBREC_1173 hypothetical protein 2243 986 Op 2 . - CDS 2315621 - 2316853 1108 ## COG0420 DNA repair exonuclease 2244 986 Op 3 . - CDS 2316891 - 2318219 1011 ## COG1160 Predicted GTPases - Prom 2318254 - 2318313 3.6 2245 987 Tu 1 . - CDS 2318333 - 2319781 1458 ## COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes - Prom 2319842 - 2319901 9.0 - Term 2319871 - 2319905 -0.8 2246 988 Op 1 . - CDS 2319968 - 2321080 778 ## COG0502 Biotin synthase and related enzymes 2247 988 Op 2 . - CDS 2321067 - 2321318 377 ## EUBREC_0233 hypothetical protein - Prom 2321390 - 2321449 6.7 - Term 2321386 - 2321451 9.3 2248 989 Tu 1 . - CDS 2321533 - 2322357 674 ## gi|227873767|ref|ZP_03991996.1| hypothetical protein HMPREF6123_1935 - Prom 2322428 - 2322487 3.2 2249 990 Op 1 . - CDS 2322550 - 2324241 1520 ## COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases 2250 990 Op 2 . - CDS 2324278 - 2325414 790 ## COG0009 Putative translation factor (SUA5) 2251 990 Op 3 . - CDS 2325504 - 2327234 1359 ## COG3858 Predicted glycosyl hydrolase - Prom 2327338 - 2327397 5.5 - Term 2327250 - 2327288 -0.8 2252 991 Tu 1 . - CDS 2327533 - 2328609 1101 ## COG0216 Protein chain release factor A - Prom 2328647 - 2328706 6.7 - Term 2329139 - 2329181 4.5 2253 992 Op 1 . - CDS 2329215 - 2329337 81 ## 2254 992 Op 2 . - CDS 2329359 - 2331092 1426 ## COG2985 Predicted permease 2255 992 Op 3 . - CDS 2331110 - 2332708 1461 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase - Prom 2332839 - 2332898 8.3 + Prom 2332924 - 2332983 7.8 2256 993 Op 1 . + CDS 2333022 - 2334509 898 ## SpiBuddy_2322 hypothetical protein 2257 993 Op 2 . + CDS 2334511 - 2335206 441 ## Cphy_3169 hypothetical protein + Prom 2335211 - 2335270 4.0 2258 994 Op 1 . + CDS 2335342 - 2335626 259 ## gi|227873771|ref|ZP_03992000.1| hypothetical protein HMPREF6123_1939 2259 994 Op 2 . + CDS 2335643 - 2335825 160 ## 2260 995 Op 1 4/0.029 - CDS 2335822 - 2336610 1007 ## COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) 2261 995 Op 2 . - CDS 2336700 - 2337851 1339 ## COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB - Prom 2337963 - 2338022 5.5 2262 996 Tu 1 . - CDS 2338063 - 2338968 436 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 2339129 - 2339188 4.7 + Prom 2339175 - 2339234 6.1 2263 997 Tu 1 . + CDS 2339339 - 2341621 2037 ## BCAH187_A2105 hypothetical protein + Prom 2341666 - 2341725 8.2 2264 998 Op 1 35/0.000 + CDS 2341850 - 2343163 1290 ## COG1653 ABC-type sugar transport system, periplasmic component + Term 2343191 - 2343233 2.1 2265 998 Op 2 38/0.000 + CDS 2343255 - 2344160 764 ## COG1175 ABC-type sugar transport systems, permease components 2266 998 Op 3 . + CDS 2344171 - 2345058 664 ## COG0395 ABC-type sugar transport system, permease component + Term 2345060 - 2345092 -0.3 + Prom 2345061 - 2345120 2.0 2267 999 Op 1 . + CDS 2345158 - 2346255 1038 ## Cphy_0570 hypothetical protein 2268 999 Op 2 . + CDS 2346332 - 2347051 238 ## PROTEIN SUPPORTED gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 2269 999 Op 3 . + CDS 2347073 - 2347555 440 ## COG0698 Ribose 5-phosphate isomerase RpiB 2270 999 Op 4 . + CDS 2347559 - 2349316 1425 ## COG1154 Deoxyxylulose-5-phosphate synthase 2271 999 Op 5 . + CDS 2349317 - 2350348 729 ## COG0451 Nucleoside-diphosphate-sugar epimerases 2272 999 Op 6 . + CDS 2350320 - 2350436 75 ## + Prom 2350459 - 2350518 7.0 2273 1000 Tu 1 . + CDS 2350543 - 2351595 858 ## COG2008 Threonine aldolase + Term 2351613 - 2351673 -0.6 - Term 2351664 - 2351720 11.1 2274 1001 Tu 1 . - CDS 2351856 - 2352671 806 ## COG1344 Flagellin and related hook-associated proteins - Prom 2352873 - 2352932 6.5 2275 1002 Tu 1 . - CDS 2353018 - 2353833 740 ## COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit - Prom 2353873 - 2353932 5.2 2276 1003 Op 1 . - CDS 2354100 - 2355380 1448 ## COG1055 Na+/H+ antiporter NhaD and related arsenite permeases 2277 1003 Op 2 . - CDS 2355395 - 2355856 565 ## COG2731 Beta-galactosidase, beta subunit - Prom 2355879 - 2355938 1.9 2278 1004 Op 1 . - CDS 2355952 - 2356206 140 ## COG4115 Uncharacterized protein conserved in bacteria 2279 1004 Op 2 . - CDS 2356208 - 2356453 337 ## Dtox_4301 prevent-host-death family protein - Prom 2356474 - 2356533 4.6 2280 1004 Op 3 . - CDS 2356551 - 2357216 676 ## COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain - Prom 2357262 - 2357321 5.9 + Prom 2357311 - 2357370 5.2 2281 1005 Tu 1 . + CDS 2357462 - 2359690 1576 ## COG0840 Methyl-accepting chemotaxis protein + Term 2359744 - 2359799 11.3 - Term 2359738 - 2359781 7.0 2282 1006 Tu 1 . - CDS 2359880 - 2361937 1920 ## gi|227873671|ref|ZP_03991906.1| cell wall surface anchor family protein - Prom 2362103 - 2362162 10.6 - Term 2362196 - 2362234 2.4 2283 1007 Op 1 1/0.105 - CDS 2362259 - 2362972 667 ## COG0778 Nitroreductase 2284 1007 Op 2 2/0.038 - CDS 2362974 - 2363834 776 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 2285 1007 Op 3 . - CDS 2363831 - 2365030 1434 ## COG0673 Predicted dehydrogenases and related proteins 2286 1007 Op 4 . - CDS 2365063 - 2365167 125 ## - Prom 2365225 - 2365284 4.2 + Prom 2365202 - 2365261 7.0 2287 1008 Tu 1 . + CDS 2365343 - 2367034 1593 ## COG4166 ABC-type oligopeptide transport system, periplasmic component + Term 2367107 - 2367158 13.1 - Term 2367095 - 2367146 16.7 2288 1009 Tu 1 . - CDS 2367189 - 2368946 1396 ## COG5263 FOG: Glucan-binding domain (YG repeat) - Prom 2369079 - 2369138 6.9 + Prom 2369363 - 2369422 3.4 2289 1010 Op 1 . + CDS 2369446 - 2369655 107 ## 2290 1010 Op 2 . + CDS 2369598 - 2370416 304 ## Elen_1519 Abi family protein + Term 2370455 - 2370491 2.2 + Prom 2370419 - 2370478 4.4 2291 1011 Tu 1 . + CDS 2370577 - 2370819 63 ## - Term 2370741 - 2370800 20.2 2292 1012 Op 1 . - CDS 2370816 - 2371703 831 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 2293 1012 Op 2 . - CDS 2371713 - 2372819 1088 ## COG0006 Xaa-Pro aminopeptidase 2294 1013 Op 1 8/0.000 - CDS 2372934 - 2373956 1013 ## COG0524 Sugar kinases, ribokinase family - Prom 2373981 - 2374040 4.1 2295 1013 Op 2 . - CDS 2374080 - 2374724 647 ## COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase - Prom 2374786 - 2374845 7.7 + Prom 2375075 - 2375134 4.8 2296 1014 Tu 1 . + CDS 2375154 - 2376284 941 ## COG0726 Predicted xylanase/chitin deacetylase + Term 2376298 - 2376339 9.0 - Term 2376276 - 2376335 19.1 2297 1015 Op 1 44/0.000 - CDS 2376358 - 2377389 931 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 2298 1015 Op 2 44/0.000 - CDS 2377466 - 2378605 553 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 2299 1015 Op 3 49/0.000 - CDS 2378621 - 2380294 1545 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 2300 1015 Op 4 38/0.000 - CDS 2380309 - 2381295 1017 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components - Prom 2381328 - 2381387 2.8 - Term 2381349 - 2381392 6.2 2301 1015 Op 5 . - CDS 2381434 - 2383755 2417 ## COG0747 ABC-type dipeptide transport system, periplasmic component - Prom 2383777 - 2383836 5.5 2302 1016 Op 1 . - CDS 2383850 - 2384260 206 ## gi|227871772|ref|ZP_03990177.1| hypothetical protein HMPREF6123_0116 2303 1016 Op 2 . - CDS 2384260 - 2384415 112 ## 2304 1016 Op 3 . - CDS 2384415 - 2386118 1939 ## COG1164 Oligoendopeptidase F - Prom 2386163 - 2386222 4.2 2305 1017 Op 1 10/0.000 - CDS 2386530 - 2387495 1300 ## COG4211 ABC-type glucose/galactose transport system, permease component 2306 1017 Op 2 16/0.000 - CDS 2387570 - 2389078 1569 ## COG1129 ABC-type sugar transport system, ATPase component - Term 2389093 - 2389139 5.1 2307 1017 Op 3 1/0.105 - CDS 2389153 - 2390265 1214 ## COG1879 ABC-type sugar transport system, periplasmic component - Prom 2390304 - 2390363 6.5 2308 1018 Op 1 2/0.038 - CDS 2390405 - 2391472 937 ## COG0673 Predicted dehydrogenases and related proteins 2309 1018 Op 2 . - CDS 2391531 - 2392766 815 ## COG1940 Transcriptional regulator/sugar kinase 2310 1018 Op 3 . - CDS 2392797 - 2393630 856 ## Closa_0336 Xylose isomerase domain protein TIM barrel 2311 1018 Op 4 38/0.000 - CDS 2393649 - 2394479 707 ## COG0395 ABC-type sugar transport system, permease component 2312 1018 Op 5 35/0.000 - CDS 2394476 - 2395360 852 ## COG1175 ABC-type sugar transport systems, permease components 2313 1018 Op 6 2/0.038 - CDS 2395452 - 2396768 1514 ## COG1653 ABC-type sugar transport system, periplasmic component 2314 1018 Op 7 . - CDS 2396822 - 2397835 939 ## COG0673 Predicted dehydrogenases and related proteins - Prom 2397891 - 2397950 9.3 2315 1019 Tu 1 . - CDS 2397954 - 2399393 1096 ## COG0285 Folylpolyglutamate synthase 2316 1020 Tu 1 . - CDS 2399500 - 2401623 1473 ## gi|300813252|ref|ZP_07093614.1| hypothetical protein HMPREF9131_0589 2317 1021 Op 1 . - CDS 2401793 - 2402359 369 ## DSY4458 hypothetical protein 2318 1021 Op 2 . - CDS 2402379 - 2404286 1702 ## COG1086 Predicted nucleoside-diphosphate sugar epimerases - Term 2404471 - 2404502 -0.3 2319 1022 Tu 1 . - CDS 2404512 - 2405015 630 ## Closa_0499 hypothetical protein - Prom 2405064 - 2405123 5.2 - Term 2405105 - 2405147 6.0 2320 1023 Tu 1 . - CDS 2405159 - 2407792 2752 ## COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase - Prom 2407910 - 2407969 6.0 - Term 2407985 - 2408037 10.0 2321 1024 Op 1 40/0.000 - CDS 2408053 - 2408754 752 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 2322 1024 Op 2 . - CDS 2408763 - 2409866 937 ## COG0642 Signal transduction histidine kinase 2323 1024 Op 3 . - CDS 2409931 - 2411052 1096 ## COG0562 UDP-galactopyranose mutase 2324 1024 Op 4 . - CDS 2411097 - 2411546 413 ## COG1846 Transcriptional regulators 2325 1024 Op 5 11/0.000 - CDS 2411587 - 2412501 557 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 - Prom 2412613 - 2412672 1.7 2326 1024 Op 6 . - CDS 2412674 - 2412982 510 ## COG0526 Thiol-disulfide isomerase and thioredoxins - Prom 2413091 - 2413150 7.4 2327 1025 Op 1 . - CDS 2413206 - 2413751 448 ## Closa_0675 regulatory protein RecX 2328 1025 Op 2 . - CDS 2413758 - 2414882 1420 ## COG0468 RecA/RadA recombinase - Prom 2415008 - 2415067 3.4 + Prom 2415290 - 2415349 9.0 2329 1026 Tu 1 . + CDS 2415450 - 2416799 389 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 2330 1027 Op 1 . - CDS 2416802 - 2417992 566 ## COG3594 Fucose 4-O-acetylase and related acetyltransferases 2331 1027 Op 2 . - CDS 2418041 - 2419729 2094 ## COG1109 Phosphomannomutase 2332 1027 Op 3 . - CDS 2419773 - 2421116 1428 ## COG0617 tRNA nucleotidyltransferase/poly(A) polymerase 2333 1027 Op 4 . - CDS 2421181 - 2422122 1075 ## COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase - Prom 2422180 - 2422239 2.2 - Term 2422193 - 2422229 8.0 2334 1028 Op 1 . - CDS 2422241 - 2423677 1658 ## COG0442 Prolyl-tRNA synthetase - Prom 2423808 - 2423867 4.5 2335 1028 Op 2 . - CDS 2423964 - 2424959 832 ## gi|291562113|emb|CBL40929.1| hypothetical protein CK3_11920 - Prom 2424999 - 2425058 6.2 - Term 2425050 - 2425093 7.1 2336 1029 Op 1 . - CDS 2425123 - 2426565 1450 ## COG1966 Carbon starvation protein, predicted membrane protein 2337 1029 Op 2 . - CDS 2426617 - 2426724 57 ## - Prom 2426799 - 2426858 4.7 2338 1030 Tu 1 . - CDS 2426907 - 2427656 347 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 2339 1031 Op 1 . - CDS 2427765 - 2430032 1037 ## COG1533 DNA repair photolyase 2340 1031 Op 2 . - CDS 2430084 - 2432138 1791 ## COG0855 Polyphosphate kinase - Prom 2432210 - 2432269 5.2 - Term 2432231 - 2432285 4.6 2341 1032 Tu 1 . - CDS 2432363 - 2433784 1510 ## COG0531 Amino acid transporters - Prom 2433805 - 2433864 3.4 2342 1033 Tu 1 . - CDS 2433901 - 2435235 1232 ## COG1362 Aspartyl aminopeptidase - Prom 2435335 - 2435394 6.6 + Prom 2435404 - 2435463 7.2 2343 1034 Op 1 . + CDS 2435585 - 2435794 428 ## Acfer_1414 hypothetical protein 2344 1034 Op 2 . + CDS 2435794 - 2436399 687 ## Acfer_1413 hypothetical protein 2345 1034 Op 3 . + CDS 2436450 - 2437013 607 ## COG3945 Uncharacterized conserved protein + Term 2437036 - 2437072 1.0 - Term 2437169 - 2437202 6.1 2346 1035 Tu 1 . - CDS 2437262 - 2438002 681 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - Prom 2438031 - 2438090 5.7 2347 1036 Tu 1 . + CDS 2438198 - 2439841 1550 ## COG1151 6Fe-6S prismane cluster-containing protein + Term 2439888 - 2439942 7.1 2348 1037 Tu 1 . - CDS 2439888 - 2439956 60 ## - Prom 2440167 - 2440226 3.7 + Prom 2439914 - 2439973 3.5 2349 1038 Tu 1 . + CDS 2440111 - 2440476 411 ## COG3189 Uncharacterized conserved protein + Term 2440511 - 2440548 6.0 - Term 2440382 - 2440425 2.5 2350 1039 Tu 1 . - CDS 2440494 - 2441606 776 ## COG2070 Dioxygenases related to 2-nitropropane dioxygenase - Prom 2441639 - 2441698 9.6 - Term 2441831 - 2441874 9.2 2351 1040 Tu 1 . - CDS 2441963 - 2442385 591 ## COG0716 Flavodoxins - Prom 2442431 - 2442490 4.6 - Term 2442518 - 2442549 0.2 2352 1041 Tu 1 . - CDS 2442627 - 2443217 377 ## Clole_3254 hypothetical protein - Prom 2443256 - 2443315 4.2 2353 1042 Op 1 . - CDS 2443327 - 2443440 63 ## 2354 1042 Op 2 . - CDS 2443528 - 2443644 57 ## 2355 1043 Op 1 . - CDS 2443749 - 2444954 1143 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase 2356 1043 Op 2 . - CDS 2445011 - 2446087 770 ## COG4905 Predicted membrane protein - Prom 2446152 - 2446211 3.4 2357 1044 Op 1 . - CDS 2446213 - 2446881 556 ## COG0546 Predicted phosphatases 2358 1044 Op 2 . - CDS 2446856 - 2447722 666 ## gi|227874137|ref|ZP_03992343.1| hypothetical protein HMPREF6123_2282 - Prom 2447827 - 2447886 2.2 - Term 2447829 - 2447872 4.4 2359 1045 Op 1 . - CDS 2447896 - 2448582 479 ## Closa_0515 hypothetical protein 2360 1045 Op 2 . - CDS 2448589 - 2450166 1093 ## COG1292 Choline-glycine betaine transporter 2361 1045 Op 3 . - CDS 2450141 - 2451457 1250 ## COG1879 ABC-type sugar transport system, periplasmic component - Term 2451516 - 2451554 4.1 2362 1046 Op 1 . - CDS 2451566 - 2452534 894 ## EUBREC_0483 hypothetical protein 2363 1046 Op 2 7/0.000 - CDS 2452443 - 2454356 1463 ## COG2972 Predicted signal transduction protein with a C-terminal ATPase domain - Term 2454365 - 2454420 5.9 2364 1046 Op 3 . - CDS 2454467 - 2456092 1410 ## COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain 2365 1046 Op 4 . - CDS 2456089 - 2456382 247 ## gi|227874144|ref|ZP_03992350.1| hypothetical protein HMPREF6123_2289 - Prom 2456497 - 2456556 11.4 + Prom 2456557 - 2456616 7.3 2366 1047 Tu 1 . + CDS 2456655 - 2457257 494 ## gi|227874145|ref|ZP_03992351.1| conserved hypothetical protein 2367 1048 Tu 1 . + CDS 2457383 - 2458162 931 ## COG1521 Putative transcriptional regulator, homolog of Bvg accessory factor - Term 2458004 - 2458046 0.1 2368 1049 Op 1 . - CDS 2458199 - 2460532 1489 ## gi|227874148|ref|ZP_03992353.1| hypothetical protein HMPREF6123_2292 2369 1049 Op 2 . - CDS 2460529 - 2461161 268 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 2370 1049 Op 3 . - CDS 2461181 - 2463157 1780 ## gi|227874150|ref|ZP_03992355.1| conserved hypothetical protein - Prom 2463213 - 2463272 6.0 - Term 2463224 - 2463259 -0.3 2371 1050 Tu 1 . - CDS 2463488 - 2463769 243 ## gi|317501345|ref|ZP_07959548.1| hypothetical protein HMPREF1026_01492 - Prom 2463856 - 2463915 5.5 2372 1051 Tu 1 . - CDS 2463942 - 2464355 241 ## HMPREF0868_0530 hypothetical protein - Prom 2464402 - 2464461 2.8 - Term 2464411 - 2464447 6.4 2373 1052 Op 1 . - CDS 2464553 - 2464846 413 ## HMPREF0424_1165 toxin-antitoxin system, antitoxin component, Xre family 2374 1052 Op 2 . - CDS 2464843 - 2464998 81 ## gi|291458797|ref|ZP_06598187.1| toxin-antitoxin system, toxin component, RelE family - Prom 2465020 - 2465079 6.3 2375 1053 Op 1 . - CDS 2465136 - 2466404 1250 ## gi|227874150|ref|ZP_03992355.1| conserved hypothetical protein 2376 1053 Op 2 . - CDS 2466431 - 2466856 391 ## gi|227874150|ref|ZP_03992355.1| conserved hypothetical protein - Prom 2466910 - 2466969 6.1 - Term 2466912 - 2466964 7.8 2377 1054 Tu 1 . - CDS 2466991 - 2468748 1864 ## gi|227874150|ref|ZP_03992355.1| conserved hypothetical protein - Prom 2468802 - 2468861 6.6 - Term 2468913 - 2468948 4.0 2378 1055 Op 1 . - CDS 2468965 - 2470521 1529 ## COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes 2379 1055 Op 2 . - CDS 2470596 - 2471165 419 ## Cphy_1463 GTPase EngC 2380 1055 Op 3 . - CDS 2471239 - 2472903 1438 ## COG2508 Regulator of polyketide synthase expression - Prom 2472939 - 2472998 6.3 - Term 2473149 - 2473202 4.6 2381 1056 Op 1 . - CDS 2473259 - 2474434 1381 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase 2382 1056 Op 2 . - CDS 2474483 - 2475160 724 ## Amico_1858 hypothetical protein 2383 1056 Op 3 . - CDS 2475179 - 2475901 755 ## Amico_1857 hypothetical protein 2384 1056 Op 4 . - CDS 2475889 - 2476014 115 ## - Prom 2476101 - 2476160 9.2 + Prom 2476085 - 2476144 9.8 2385 1057 Op 1 35/0.000 + CDS 2476215 - 2478017 180 ## PROTEIN SUPPORTED gi|225088774|ref|YP_002660041.1| ribosomal protein S16 2386 1057 Op 2 . + CDS 2478010 - 2479749 1266 ## COG1132 ABC-type multidrug transport system, ATPase and permease components 2387 1058 Op 1 . + CDS 2479852 - 2480700 632 ## Closa_3472 O-methyltransferase 2388 1058 Op 2 . + CDS 2480740 - 2481501 330 ## COG0564 Pseudouridylate synthases, 23S RNA-specific + Prom 2481505 - 2481564 5.3 2389 1059 Op 1 . + CDS 2481660 - 2482577 678 ## COG1092 Predicted SAM-dependent methyltransferases 2390 1059 Op 2 . + CDS 2482653 - 2483963 1158 ## COG5263 FOG: Glucan-binding domain (YG repeat) + Term 2483978 - 2484021 9.1 + Prom 2483970 - 2484029 8.2 2391 1060 Tu 1 . + CDS 2484217 - 2484774 334 ## COG3859 Predicted membrane protein + Term 2484801 - 2484838 3.0 2392 1061 Tu 1 . - CDS 2484771 - 2485649 668 ## Selsp_0303 hypothetical protein - Prom 2485717 - 2485776 8.5 - Term 2485752 - 2485815 5.3 2393 1062 Tu 1 . - CDS 2485903 - 2486748 287 ## gi|227873202|ref|ZP_03991482.1| conserved hypothetical protein 2394 1063 Tu 1 . - CDS 2486856 - 2487131 165 ## 2395 1064 Tu 1 . - CDS 2487248 - 2488471 1720 ## COG0462 Phosphoribosylpyrophosphate synthetase - Prom 2488502 - 2488561 5.4 - Term 2488555 - 2488595 1.6 2396 1065 Op 1 . - CDS 2488599 - 2489060 335 ## COG1484 DNA replication protein 2397 1065 Op 2 . - CDS 2489057 - 2489554 475 ## Closa_0113 IstB domain protein ATP-binding protein 2398 1065 Op 3 . - CDS 2489545 - 2490432 723 ## Closa_0112 primosome, DnaD subunit - Term 2490713 - 2490758 7.2 2399 1066 Op 1 . - CDS 2490898 - 2491695 631 ## gi|227873035|ref|ZP_03991330.1| hypothetical protein HMPREF6123_1269 2400 1066 Op 2 . - CDS 2491713 - 2492456 753 ## COG4509 Uncharacterized protein conserved in bacteria - Prom 2492492 - 2492551 4.8 2401 1067 Tu 1 . - CDS 2492710 - 2494041 1335 ## gi|227873038|ref|ZP_03991333.1| conserved hypothetical protein - Prom 2494075 - 2494134 4.5 2402 1068 Tu 1 . - CDS 2494471 - 2499576 3031 ## gi|227873039|ref|ZP_03991334.1| conserved hypothetical protein - Prom 2499723 - 2499782 4.8 + Prom 2500075 - 2500134 10.2 2403 1069 Op 1 . + CDS 2500296 - 2500976 542 ## COG0279 Phosphoheptose isomerase 2404 1069 Op 2 . + CDS 2500995 - 2501309 244 ## bpr_II167 hypothetical protein + Term 2501338 - 2501376 5.0 2405 1070 Op 1 . - CDS 2501304 - 2502017 653 ## COG0241 Histidinol phosphatase and related phosphatases 2406 1070 Op 2 . - CDS 2502011 - 2502730 601 ## COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) - Prom 2502789 - 2502848 1.9 2407 1071 Op 1 . + CDS 2502819 - 2503001 58 ## 2408 1071 Op 2 . + CDS 2503076 - 2503372 94 ## - Term 2503267 - 2503307 7.2 2409 1072 Op 1 2/0.038 - CDS 2503378 - 2507067 3343 ## COG0438 Glycosyltransferase 2410 1072 Op 2 . - CDS 2507064 - 2508434 1402 ## COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component - Prom 2508478 - 2508537 7.0 - Term 2508530 - 2508569 6.6 2411 1073 Op 1 21/0.000 - CDS 2508573 - 2508845 434 ## PROTEIN SUPPORTED gi|227874245|ref|ZP_03992444.1| possible ribosomal protein S18 2412 1073 Op 2 24/0.000 - CDS 2508909 - 2509370 502 ## COG0629 Single-stranded DNA-binding protein 2413 1073 Op 3 . - CDS 2509393 - 2509731 526 ## PROTEIN SUPPORTED gi|227874247|ref|ZP_03992446.1| possible ribosomal protein S6 - Prom 2509794 - 2509853 5.5 2414 1074 Op 1 . - CDS 2509958 - 2510605 570 ## Closa_0228 GCN5-related N-acetyltransferase 2415 1074 Op 2 . - CDS 2510580 - 2511590 950 ## COG4866 Uncharacterized conserved protein - Prom 2511622 - 2511681 9.4 - Term 2511640 - 2511682 3.2 2416 1075 Op 1 1/0.105 - CDS 2511804 - 2512547 766 ## COG4123 Predicted O-methyltransferase 2417 1075 Op 2 1/0.105 - CDS 2512551 - 2513390 659 ## COG1774 Uncharacterized homolog of PSP1 2418 1075 Op 3 . - CDS 2513403 - 2514287 665 ## COG2812 DNA polymerase III, gamma/tau subunits 2419 1075 Op 4 . - CDS 2514310 - 2514981 581 ## COG0194 Guanylate kinase 2420 1075 Op 5 . - CDS 2514981 - 2515511 564 ## gi|227874255|ref|ZP_03992454.1| GL10540 like protein 2421 1075 Op 6 . - CDS 2515591 - 2516406 586 ## COG0340 Biotin-(acetyl-CoA carboxylase) ligase 2422 1075 Op 7 . - CDS 2516403 - 2516762 241 ## Closa_1095 hypothetical protein - Prom 2516801 - 2516860 5.9 - TRNA 2516828 - 2516899 69.0 # Glu TTC 0 0 - TRNA 2516919 - 2516989 65.5 # Cys GCA 0 0 - TRNA 2517017 - 2517089 75.9 # Asn GTT 0 0 - 5S_RRNA 2517435 - 2517696 96.0 # AF142677 [R:48033..48709] # 5S ribosomal RNA # Bacillus megaterium # Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus. Predicted protein(s) >gi|333758476|gb|AFIH01000001.1| GENE 1 494 - 637 74 47 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|291458681|ref|ZP_06598071.1| ## NR: gi|291458681|ref|ZP_06598071.1| conserved hypothetical protein [Oribacterium sp. oral taxon 078 str. F0262] conserved hypothetical protein [Oribacterium sp. oral taxon 078 str. F0262] # 1 44 96 139 235 72 84.0 1e-11 MGFPIQISADQLVFANPRSFSQLITSFFGSQCLGIHPMLLLLNQFST >gi|333758476|gb|AFIH01000001.1| GENE 2 795 - 1025 176 76 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MYIAAFTANGDKGIRTLDPLLARQVLSQLSYTPKAFAFDFQKNVWHPPIFPCRYQQSIFG RLSLNRRVRDGNGCFP >gi|333758476|gb|AFIH01000001.1| GENE 3 3012 - 3563 305 183 aa, chain - ## HITS:1 COG:no KEGG:Closa_1057 NR:ns ## KEGG: Closa_1057 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 20 113 22 109 336 79 40.0 5e-14 MKKMLSVLLSCFVLLFPICSQASGWQGNAEQGWWYGTNEENSTWYQGGWYWIDGNNDGIA ECYYFTDSGYLVVGGKTPDGSLVNSSGAWIVNDVVQTKSVELENKTTSRNNTQAQKNTES NTNEETKVTNPTEYSYIGNKNTHKFHKPSCRSVKQMKESNKVAIVSREDAVRKGYQPCAI CNP >gi|333758476|gb|AFIH01000001.1| GENE 4 3852 - 5519 1109 555 aa, chain + ## HITS:1 COG:SP1273 KEGG:ns NR:ns ## COG: SP1273 COG3475 # Protein_GI_number: 15901133 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: LPS biosynthesis protein # Organism: Streptococcus pneumoniae TIGR4 # 29 290 13 264 267 105 30.0 2e-22 MEFPKEFFLDEVREGFYIPAMMKRAWAAELEILVEIDKICEKHKLRYFIDYGNLLGAIRH KGFIPWDDDIDIMMMRKDYEIFAEVAEAELPEELSFRSIQKGNNNCELISSVQHNRMLIS SDALGKYHNYLYGAGVDIFPYDYLSDDEEKERKRMELLKSLCILASFPSLEGENRAVLER EARKVEKTCHVKLLQSPHYRETLLSLLEECFQRFNQDKGKRIASLLDFILFQSQGKGIFE EQWFQDECYLDFEFLSLPAPKEYKKIISEKYDDYQTVKKGGGDHDYPVYRKMEAEYTKGI GGKLFYQYAIKEEDLKKRINTSSAPERQDRSGIRKPRIFFLPSLHSRWDAMRGIFVEASK DKTVDCFVLPVPYFYKDGLGNCSPAQWDYSLFENELGADSPFLLDFRGLDLKELSPDVIF MDEPYDEYNLSFMVEPTFFSKNLKQCTKQLIYLPWFVSSEIDLEDQDDGKAIVNAENYVV MPALVHCDYTVLQSQAIAKLYQSLLEKECGKEYAGYWEEKLLPLGSALFDKTEKEEHYGS HAIWEHLKRRKICTT >gi|333758476|gb|AFIH01000001.1| GENE 5 5507 - 6574 910 355 aa, chain + ## HITS:1 COG:TM1040 KEGG:ns NR:ns ## COG: TM1040 COG0079 # Protein_GI_number: 15643798 # Func_class: E Amino acid transport and metabolism # Function: Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase # Organism: Thermotoga maritima # 17 296 15 286 335 120 30.0 6e-27 MYHLDPNIQNLHRIFDQNERKDYLRLDLNENPGGLPEEFIRKVLSDITPQFVAQYPETLH FTEVLAKYLKTDIRHLCLVNGSSEGIRYIIQAFTSNGGRIVGVVPSYFMFQVYAEMYGRN FVPVPYTEDLEMPVSRILEYLTEETELLILLNPNNPMGNVYTEEEFQEILKACKEKEITV LIDEAYHYFYPNTFIHYALTERRVFVTRTFSKLFSLAGCRLGYVAGHPEDIQYVQKFCTP HNTNAFAMKFAEEILENPKILSDLISHFEEGRAYLLQALEEHHYPYKGEAGNFLFIKPRR DAEEIVKKMKEDYGILIKSYPAIGKLGTCLRVTIGEKKYMERFMKALLELDSKTL >gi|333758476|gb|AFIH01000001.1| GENE 6 6610 - 7929 1035 439 aa, chain + ## HITS:1 COG:aq_1368 KEGG:ns NR:ns ## COG: aq_1368 COG0615 # Protein_GI_number: 15606564 # Func_class: M Cell wall/membrane/envelope biogenesis; I Lipid transport and metabolism # Function: Cytidylyltransferase # Organism: Aquifex aeolicus # 4 131 8 134 168 137 53.0 4e-32 MIKVITYGTYDLLHEGHIRLLERAKALGDYLIVGVTSDDFDRSRGKINVKQSLTERIEGI KKTGLADEIIVEEYEGQKIDDIQKYGVSIFTVGSDWEGYFDYLKEYCTVIYLPRTTGISS SELRAEDRKLNLGLLGGFEENVLNKYFQESSFVNGITVTTLFNSSKSTDVTLQDYDDFLE DCDCVYILSHPTKHYREIKHALERGKHVLCESPIALTLEETKELFALAEKKNLILMEAIK TAYSNAYNRLILLVKTGKIGKVVSVDATCTSLQNFNNKNLETAWNSICAWGPTAMLPIFQ LLQGPYETQMYSLFENETLKYDSFTKIDFFFQNATASIKVGRGVKSEGELIISGTEGYIY VPAPWWKTDYFELRFEDPNENRRYFYPLEGEGIRLQLLAFSKAIMEGIKSPYIRTEVSEK ISSVIESFYSGQNLRKLSF >gi|333758476|gb|AFIH01000001.1| GENE 7 8070 - 8636 561 188 aa, chain + ## HITS:1 COG:CAC1629 KEGG:ns NR:ns ## COG: CAC1629 COG0693 # Protein_GI_number: 15894907 # Func_class: R General function prediction only # Function: Putative intracellular protease/amidase # Organism: Clostridium acetobutylicum # 3 182 2 177 188 127 41.0 2e-29 MAKVFAFFAEGTEEIECLTVVDILRRGSVDVELISITENKTVVGSHKITVVCDKTIEEAD FETADLLFLPGGMPGVTHLEQNQKLLSAIKAHKEKGKLLAAICAAPSIFGHLGFLNDLPF TCFPGFQEGIDGVDGAKWTGAAVESTEQFITGRGMGVAVDFSLALLARLKGKEVAAKIKS GIQHPETL >gi|333758476|gb|AFIH01000001.1| GENE 8 8602 - 9792 901 396 aa, chain - ## HITS:1 COG:SP0873 KEGG:ns NR:ns ## COG: SP0873 COG0628 # Protein_GI_number: 15900756 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Streptococcus pneumoniae TIGR4 # 38 381 27 350 369 116 27.0 7e-26 MNWKNLWNRKYALLVLYILLAAFLYHIGIQILDHFSGVGENLQNMFSWLPQVMSPLFFGF ALAYLLSPLCRFFERILEKNKFLAKKQAMARNLSIFLSFSLLLIGIVILASLLLSTVSKS IQLVRFDDLFQGIIDFATTVEKFYSDLYSRLDNLPIGEEDAKEAIQLFLQKVVSFFQNMG NGALSSLGNFGGVLSTLLFGIIFSLYFLADGRKILSYWGRVFSLLFGKERVEKLSLFFKD ADRVFAGYLRGQIIDGFIMAILVSITLSLLGVRYALVIGVLTGFGNLIPYIGPFIAYSLT ILVCVLYGEFAKLPPAIIALFIIQTLDGNVINPRLLSHNIDVHPLVVMISLIIGGSLGGF LGIFLAAPVASLIKLELDKYMERKAATKSPDAECRT >gi|333758476|gb|AFIH01000001.1| GENE 9 10302 - 11084 238 260 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 4 257 5 227 311 96 28 5e-18 MAILEMKGIKKRFSGEEILKGIDLSCKEGEVLSIIGPSGSGKSTLLRIATFLENADSGTI IYDGKTVFQREAQPESLRKVGDSIGWDTANRQQAKALFGLVFQNFNLFPHWTVLENIIDP LIHVQKKEKSFAVEKGRALLERMGLSDKEGQYPCSLSGGQKQRVAIARALALEPKILFFD EPTSALDPELTGEVLRLIRSLKDERMAMVIVTHEMNFAREISDEVLFMAEGEVLCRGSSE AVFTAENERLQSFLGKIQMS >gi|333758476|gb|AFIH01000001.1| GENE 10 11180 - 11830 534 216 aa, chain - ## HITS:1 COG:SP1502 KEGG:ns NR:ns ## COG: SP1502 COG0765 # Protein_GI_number: 15901349 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 4 216 5 213 213 143 41.0 3e-34 MEWYVILSKLLGGLGVSLSIFLITLLFSLPLGLLLSFGRMSRNPILQNATKVYISIMRGT PLMLQLFVVYYGPYYIFKIQLHPGYRMMAVYIGFVLNYAGYFAEIYRSGIQAMDKGQLEA AEILGYSKTQAFLRIIFPQVWKNILPSITNEVITLVKDTSLAFSISVMEMFTTAKAISSS QSSMLPLIMAGILYYIFNFIVAFLMERFEKKMDYYR >gi|333758476|gb|AFIH01000001.1| GENE 11 11907 - 12725 1025 272 aa, chain - ## HITS:1 COG:SP1500 KEGG:ns NR:ns ## COG: SP1500 COG0834 # Protein_GI_number: 15901347 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Streptococcus pneumoniae TIGR4 # 12 264 3 266 278 146 34.0 3e-35 MAMWGKVSGKGKWTRVLTLGVLALTTLALTACGGKKAEQASSFTVGFDQEFPPMGFVAED GSYTGYDLELAEEVAKRLNLKFVAKPINWDGKDLELNSGNIDCIWNGFSMNGREENYTFV GPYMANKQVFVVKADSNISTLSDLAGKTVEVQKDSSGLEALSREENKSLKDSFSSLVEVG DYQSAMMDLETGACDAICMDSVVAEYQIKTANKPFVLLKDTLSAEEYGIGFKKGNTELAE KVKKTLLEMKADGTVDKITEKWFGSKDSFVLE >gi|333758476|gb|AFIH01000001.1| GENE 12 12941 - 13411 435 156 aa, chain - ## HITS:1 COG:no KEGG:FMG_0389 NR:ns ## KEGG: FMG_0389 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 15 151 12 147 150 88 34.0 8e-17 MESHEYEMHHQDLRYRGIVRQDGRVQVYMQNHCIDSSKEMEFDSKKDTDTSVNLFCAGLL SGILHGICSFMKKEGNPLEDVEAKARVVLDHPLSYLGVKGYEETPRISKITIDLYFYSFL EEEEAIERCREALKKNILYQTILQAIEIELRYHVSL >gi|333758476|gb|AFIH01000001.1| GENE 13 13422 - 14600 963 392 aa, chain - ## HITS:1 COG:PAE3655 KEGG:ns NR:ns ## COG: PAE3655 COG0620 # Protein_GI_number: 18314225 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase II (cobalamin-independent) # Organism: Pyrobaculum aerophilum # 8 392 12 386 389 139 28.0 7e-33 MSKHFLPFTSSLIGSMPRTKELLSGKRRLQNGQLSREDYEPMLLRETEEVIRLQERNGID ILTGGELSRDNYVSFVAEKLEGATMMSMADMLPYMEDKQGFEEILDTLDVPAVSIKNAIC TGKIKRKESLLKEEILRIRQFSDKEIKATLPGPYLMTRSMWLPALSSKAYDSKEELGKDV VALLKEEIEELRQMGVSVIQLDEPVLTEVVFSKGKTRSFMCAALSEKKDPTEELEFATSL LKEVVDFMKEKELCSVLHVCRGNWSKNEGILLSGSYTPLVPLFAKVLPSVLALEYSTKRA GDLSSLLENESIRENCILGLGVINPRIDLVESGESIVQRAEEALQYLPKERVWLNPDCGF ATFANRPVNEFPCIEAKLKELQRAQEFLRKKY >gi|333758476|gb|AFIH01000001.1| GENE 14 14593 - 15417 927 274 aa, chain - ## HITS:1 COG:MT1720 KEGG:ns NR:ns ## COG: MT1720 COG3221 # Protein_GI_number: 15841137 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate/phosphonate transport system, periplasmic component # Organism: Mycobacterium tuberculosis CDC1551 # 2 261 4 264 274 153 32.0 3e-37 MEKIKLGAVIYAPKVTVIWGIIQEFFEKENCPIEPVFYKDYKSQVDGLMSGEIDIAWNSP LAWLDSYLRTKGECLNGSMRDTDQDRKSYLVVRKDKGYQTISDIKGKTIGFGAYDSPQAR LIPIYHLHKNGLEFEKDYTEKRFDIGLGLHGDHVGGELDAAKAMLSGEVDGSWMLDLNYK AWILDGTLDEAQVQILSETDFFDHCIFTGRADFSKEAFAHFTEVLHKMDYKNPAHKEMMD MEGLKAWVPGRTKNFEQIKKANEYLHFLRRRMHE >gi|333758476|gb|AFIH01000001.1| GENE 15 15542 - 16666 988 374 aa, chain - ## HITS:1 COG:MT1719 KEGG:ns NR:ns ## COG: MT1719 COG1960 # Protein_GI_number: 15841136 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Mycobacterium tuberculosis CDC1551 # 19 373 18 372 373 166 32.0 1e-40 MSIYCEARNFAEKFIDPCSKKVDEEGVFPVEAFAEIKKSDFLTLLIPKEQGGLGLGIQEH VEVCRAFAKSDATTGLCYMMHNVALTVVLSRGSEEMKKRIVKEVVEERKLLALAYSELGT GTHFYISDLKAENDGDKKLLSGVKSMVTSAEQASYYLVLAPSDVEGAIDNWLVPLETSGL KFEQNTWHGLGMRGNSSCQMHLNKAAISVSNRIGEEGAGQEHVFNVVAPYFIAGLAGVYS GLGEHMLEETVAHAKERKYTSGTSLAEIETVQIHLAKMYNLVNSSVCAAKEATRSAAAGE EDALAKILSARIIACEMVIEAGRLGMRVGGGKAYNKAGCMERLLRDAYAGQIMAPSADVL TVWLGKAITGLPLV >gi|333758476|gb|AFIH01000001.1| GENE 16 16848 - 17420 541 190 aa, chain - ## HITS:1 COG:L67226 KEGG:ns NR:ns ## COG: L67226 COG1335 # Protein_GI_number: 15672251 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Lactococcus lactis # 15 189 3 168 171 194 57.0 1e-49 MENYQNNNEKQEESRRYLIVVDMQKDFIDGSLGTEEAQGIVEKVKEKILSYPKDRVYATL DTHGEDYLSTQEGKRLPVPHCIKGTEGWGLHPMLKDLILLDHFFEKGSFGSLRLAESMRE LFRQQDNIEGASIELVGLCTDICVVSNALLLKAFLPELPISVDSSCCAGVTKEKHLAALE TLRSCQVEVR >gi|333758476|gb|AFIH01000001.1| GENE 17 17486 - 17953 296 155 aa, chain - ## HITS:1 COG:L67624 KEGG:ns NR:ns ## COG: L67624 COG0394 # Protein_GI_number: 15674184 # Func_class: T Signal transduction mechanisms # Function: Protein-tyrosine-phosphatase # Organism: Lactococcus lactis # 1 152 1 144 145 108 36.0 5e-24 MLKICFVCHGNICRSPMAEFIFKKILEENGRTEDFLVVSKATSTEEIYRGQGNPVYPPVR EILERLGIDCSRKRACQLQKEDYEKYDYFIGMDERNRENMKRIFGGDSEGKVSLLGDYTD RPHPIADPWYSGEFQACYEDILEGCEGLFEKIKVE >gi|333758476|gb|AFIH01000001.1| GENE 18 18303 - 18641 187 112 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325263229|ref|ZP_08129964.1| ## NR: gi|325263229|ref|ZP_08129964.1| hypothetical protein HMPREF0240_02224 [Clostridium sp. D5] hypothetical protein HMPREF0240_02224 [Clostridium sp. D5] # 1 92 236 327 347 125 77.0 8e-28 MEKKSALDFIIDALQYLISTQGDSRNEQYRTLSLSVNDNMDGKVYAVVKKELDELMKFSN EYFDVRHNDYLNGAKEKREALNDSQFIEYLYNRAYAMLYLLRLKHKDIKERE >gi|333758476|gb|AFIH01000001.1| GENE 19 18699 - 19382 249 227 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|218135205|ref|ZP_03464009.1| ## NR: gi|218135205|ref|ZP_03464009.1| hypothetical protein BACPEC_03110 [Bacteroides pectinophilus ATCC 43243] hypothetical protein BACPEC_03110 [Bacteroides pectinophilus ATCC 43243] # 4 227 20 243 383 294 64.0 3e-78 MSDKINSVKEKLINDYINKIDTAVENYNSAIETDGEIFDLVFEIANVFENDVPNLSGSLL LRTGSELRDASTTRAMLIMHLANSGIEYKGKRVEENVNEKRFWNSFIHWFETELPSMELL NTRYLHWDNWDGGTWILGLDYDHEFTLYRGTAYPDSLRNNTGDFSEIKAFIEMAYKYWVI NSGECHYKFTIEVNDRFKIFKLPYRLQSGIVIKQGYKTTFPIDKIIN >gi|333758476|gb|AFIH01000001.1| GENE 20 19961 - 20857 471 298 aa, chain - ## HITS:1 COG:no KEGG:GYMC61_3270 NR:ns ## KEGG: GYMC61_3270 # Name: not_defined # Def: hypothetical protein # Organism: Geobacillus_Y412MC61 # Pathway: not_defined # 6 298 10 303 303 207 39.0 4e-52 MISAISVKDRLKKQAIEEKKTMQDKIVMYGLERTIYRLSISEYAERFTLKGGIFLYALFN GDYTRATTDIDLLAQCISNDIEEMKKVFKEIFSIKCDDALRFDLNTLDVIYITEFKEYHG VKVSILGHLDKTKVPISIDIGFGDIVYPERMKMDFPVLLDMDIPKVYAYSINSVVAEKFE AFVSLGLANSRYKDFYDIYVLSDRYNFDGKELTNAIKETFNHRGTSFDDIVAFEDGFADD ETRLMRWNSFVKKKKALIKLGFEETVQLLKILLFPIVDAIKKNELFERTWSHEKKMWK >gi|333758476|gb|AFIH01000001.1| GENE 21 20854 - 21441 407 195 aa, chain - ## HITS:1 COG:no KEGG:GYMC61_3271 NR:ns ## KEGG: GYMC61_3271 # Name: not_defined # Def: hypothetical protein # Organism: Geobacillus_Y412MC61 # Pathway: not_defined # 17 195 23 202 202 128 40.0 1e-28 MKEYSKVSNEQLIFSNQELKDKGLSYYKINQLVKQGILIKLNKKYYENTNFDGEESDFYY AYAYVPNGVICLLSAAVHYNLSTHRLEAIDIAIPRKARVSTLPEWPELKIYYFTDERFSV GAEIIEVGKNKFRIYDVEKTVVDIVFYREKMGIEETKEVLSNYLHRKDRNLNKLIRYAEM LKCEDTINKYLEVLI >gi|333758476|gb|AFIH01000001.1| GENE 22 21749 - 23509 787 586 aa, chain - ## HITS:1 COG:SA2216 KEGG:ns NR:ns ## COG: SA2216 COG1132 # Protein_GI_number: 15928006 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Staphylococcus aureus N315 # 1 585 1 577 577 505 44.0 1e-142 MFRTIRRIIHWCGDFRKRLYISFFFSFLSGLSAAAPAIYAGYIIGNVVQWQVEGLGIPSG LWFQSLSVIFATILLRFLLDYLKARFQETISYELVARDRLAIGTALKRVSLGYFQEKDTG TILTSITTGLYTLENMGMRMIDTFVGGYLSFFCIFILLFVIHPFGASICLIGVLLSFLCL SLISMYSKRNTLVQNEVNEKLTRAAVEYTRGLPVVKSFGMEGASFSAFRKACVEARKIAL KIEWGFIPFNCLHLFALKLSGIVMIISVMAAGLSGNLSLPMVLVFSLLSLTVFHSLEPIA DSAHILSVINNAMDQIEALSPDNYIDEDGKDISPSGYDIHFDQVQFSYGKGDEKRKVIEG VSFTAQEGTTTAIVGPSGSGKTTLCRLLARFYDVSGGRITLGGHNLKEFTCDSLLSNISM VFQNVYLFHDTVRANICFGKEQASEEEMIRAAKQARCHDFIMALPEGYDTVIGEGGSTLS GGEKQRISIARAILKNAPVIILDEATASLDPENEHLIQEALTELTVGKTVIVIAHRLATI ENADQILVFDDGHIVQKGTHRQLIRQEGIYQRFVKIRELAEGWSIV >gi|333758476|gb|AFIH01000001.1| GENE 23 23509 - 25212 202 567 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 316 540 2 228 245 82 27 8e-14 MWLSVILSIVSIVSGLIPFYCVYRMVEAYIAGTLENAVILFWGAIAALAYTVKVVCFGFS TGLSHYVAYYVLEGLRLKIAESFLKAPLGEVQAHSIGEIKNVIVDRIEEIEPPLAHMIPE GSGHIVLPAISLIALFFLDFRVALGSLLSLPIGFMFMLLTFAISGKSMKKYMESNVRMNS VIVEYIEGIEVIRAFGKAGSSYKKYADTVLEYKDFVIDWMRNTWVTMKLAFAFMPATLLG VVPVSLYLVSRGSLSVSEMTLAVMLAMSMVVSFAKLEIFANSIRQMKYTVDQTEAFLNMT RLSEPESETILEGRDVHLKNVRFSYSAKSGEILHGIDLTLPEGSYTALVGPSGGGKSTLA RLIARFWDVCDGSIEIGGVDIRNMPIAQLSELVSFVTQDNFLFQASIKENIRIGNPLATD EEVIAAAKKACCDEFISKLPDGYDTSAGEAGKRLSGGEKQRIAIARIMLKNAPIVILDEA TAFTDPENEQFIQQSISELTKGKTLLVIAHRLSTVKDADKIVVLNGGRVEAVGTHEELLE ASTLYKKMWSAHIGAKRWTLKGKEDKV >gi|333758476|gb|AFIH01000001.1| GENE 24 25316 - 26680 228 454 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225088774|ref|YP_002660041.1| ribosomal protein S16 [gamma proteobacterium NOR5-3] # 274 453 31 217 312 92 29 7e-17 MIEFIDVNYRVADYVILTGINLKIHKGECLLLAGESGSGKTTLTKLINGLIPHFYSNGEL SGGVSIQGEKVAETEIYRLAEKIGSVFQNPKSQFFYTDTSSEIAFGLENRGVPPEKIRQR IATTANELGIENLLGRNIFQLSGGEKQSIAFASAYAGEPEIYVLDEPSSNLDNLSAARLT KLLHYIKAQGKTLIIAEHRLNYLRSVIDRVVYLKGGRIMQEFTTEQFLALSERERIAMGL RSLKETRITIPACKAVKGELCIERIISPYKEQEISFGASSGDVIGIVGKNGAGKTTLCKI ICGLLKEQSGRVIYQGKKLTRRQRQRLCAMVMQDVNHQLFTDSIVEECELAAPEASKEKI DKLLQGFDLLPYKEVHPAVLSGGQRQRLAVCQAVLSGKKLVIFDEPTSGLDYTHMMQTGE IIQKLSREGYIVLVITHDYEFLNLVCHSVIQLNG >gi|333758476|gb|AFIH01000001.1| GENE 25 26768 - 27352 310 194 aa, chain - ## HITS:1 COG:SPy1788 KEGG:ns NR:ns ## COG: SPy1788 COG0619 # Protein_GI_number: 15675627 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Streptococcus pyogenes M1 GAS # 7 185 4 191 226 63 26.0 3e-10 MRYRKPDPRAGLFILLLANIGMFLERTGRQGNVLTGVIIVVLILYGCPKIAAGGAGFLLL LYCLQTFVLPASPIAFTALFSVFVNMTRRMLPCLLTGALLVKKCSVHEFVAALRKMHLPQ NFITAMAVTVRYFPAIQEEVRHIKDAMKLQSIPVERKIECYLVPIMLSATKTAEELSAAA TVRGIDSPKKRPVQ >gi|333758476|gb|AFIH01000001.1| GENE 26 27353 - 27949 529 198 aa, chain - ## HITS:1 COG:no KEGG:SEQ_1239 NR:ns ## KEGG: SEQ_1239 # Name: eqbH # Def: ABC transporter permease protein # Organism: S.equi_equi # Pathway: not_defined # 7 198 4 195 195 155 48.0 7e-37 MMNQKQKLTGKDVIAIGIYSAIYFVLNFAAMMTGFIPLLWIVLPGTVAVLTGIPFLLMVV KVPKSGAVLIMGAITAFLYFVTGQFTVLILITMFIACVVSEAYRYITKYNLKFSNLAVTF ILFSYGMAGSPLALFVYRESFLAQIGETMSQEYVAAISSYITAPMLILLLISPIVGGVFG ALIAGGIFNKHFKKAGIV >gi|333758476|gb|AFIH01000001.1| GENE 27 27962 - 28708 394 248 aa, chain - ## HITS:1 COG:all2237 KEGG:ns NR:ns ## COG: all2237 COG2207 # Protein_GI_number: 17229729 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Nostoc sp. PCC 7120 # 42 234 128 330 336 67 31.0 3e-11 METLEGRYSVLQEKQLRIDDRRHHSGHVFMPLNHFHGISIYLNVDLAPQGITSFMPQFSV DIQKLKRKFCKESVPGILEDDMAVNGIMECLYNSPANIGPDYYRLKILELLLYLDAVEIQ EGKQKETCFFLSHADKLREIHKQITENLSVHFTIRELSEEYDIPQTELKISFKEMYGDSV YSYLKRCRMNTAASLLIKNPDLSVSEIAHLVGYETTGKFAAAFRQIIGTTPLDYRKYRTK PADNLINI >gi|333758476|gb|AFIH01000001.1| GENE 28 28594 - 28944 190 116 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|229827212|ref|ZP_04453281.1| ## NR: gi|229827212|ref|ZP_04453281.1| hypothetical protein GCWU000182_02598 [Abiotrophia defectiva ATCC 49176] hypothetical protein GCWU000182_02598 [Abiotrophia defectiva ATCC 49176] # 1 60 7 66 333 121 86.0 1e-26 MNSIRTLGDNVKVLARDESHAILEVKDESGEGIMTIYTPFVGVYINICDMHMRRCRSGFF WRKMQMSSVLTTARRGGLKWRLWREGTAYSRKNSLGLMTGDIIAGMYLCHLTISMG >gi|333758476|gb|AFIH01000001.1| GENE 29 29201 - 30334 1215 377 aa, chain - ## HITS:1 COG:PM1211 KEGG:ns NR:ns ## COG: PM1211 COG1305 # Protein_GI_number: 15603076 # Func_class: E Amino acid transport and metabolism # Function: Transglutaminase-like enzymes, putative cysteine proteases # Organism: Pasteurella multocida # 83 376 48 367 368 204 35.0 3e-52 MKKSLKLVLLLGTVGMLMAACGNKSVSNTETTAKGTEQSTESVAAAEKSSEKETEKAEAS EKKVVEGAVNNTVDLSKYEKGKKVRLWIPVPHSSEYQTVEDVKYDAGNAKAEMNTDDWGN QMLYVEWDANAEPADRVVKLDLQVKREEIVSPELKEDEKAELPEDVKKYLEPSKNLPLND QVKNKAAEVTEGKATDLEKARAIYDWVIANMNRDESVKGCGEGDVCALLDTTMTGKCTDI NSMFVALCRASGIPAREHFGIRINAEDITKNQHCWAEFYLKGTGWVSADPADVLKAVLKN NWTKDQAETKEKQEYYFGNCDAERMILADGRDLTLNPAQDGEALNDFGYPYAEVDGVKLD NYTPDQFVYTYSFAKKA >gi|333758476|gb|AFIH01000001.1| GENE 30 30445 - 30597 168 50 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTTTKLWNRNFSLLILATTLGIAGGIAGGFVFFVYQSYSVMDMRLFRLPL >gi|333758476|gb|AFIH01000001.1| GENE 31 30614 - 31669 683 351 aa, chain - ## HITS:1 COG:XF1708 KEGG:ns NR:ns ## COG: XF1708 COG3093 # Protein_GI_number: 15838309 # Func_class: R General function prediction only # Function: Plasmid maintenance system antidote protein # Organism: Xylella fastidiosa 9a5c # 11 330 9 336 371 117 27.0 2e-26 MVRSRSIIATPPGATIKEQLKDRGMSQKEFAARMDMSEKHISKLINGEVQLTPEVAIRLE FVLGVPAKFWNNLEAIYREKIIKAEAENTMDKDEEIAKKLPYNEMAKFGWVPETRVLREK VVNLRKYFEIVELSLLNNIQITRIACRRRLAITEKSDLALLAWTQEAKIKARDVKTAPIN IKGLMNIIPKIRLMTVMKAKEFCPKLKSMLAECGIALVFLPHLQGSFLQGTSFIDGNKIV VGLTARGKDADKFWFSLFHELAHIILGHIGQTNGTSEDDEQAANFWSGDTLIPGNDFSEF IDRKCFSVSSIRAFAEKQGIAPGIVVVRLQNEGCIKHSALNELKEHYKIVV >gi|333758476|gb|AFIH01000001.1| GENE 32 31699 - 31917 168 72 aa, chain - ## HITS:1 COG:no KEGG:Acfer_0754 NR:ns ## KEGG: Acfer_0754 # Name: not_defined # Def: plasmid maintenance system killer # Organism: A.fermentans # Pathway: not_defined # 20 72 47 99 99 70 58.0 2e-11 MNKNCIYVNYGFTYKVNYKEEMIKFHIGRCHPLTNNRKGQYAVDLVHPYRMIFEKHGNKI QVAHIMEIVDYH >gi|333758476|gb|AFIH01000001.1| GENE 33 31958 - 32884 577 308 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MYSREKLKKLREDRGQTQYELAKIAGISVVTLNKIESSDSAKPFAKTLNKIAKALGVGID ELSESERKSSPDVFSEINAVLHSRAKVITDLMGIDSFTFAYIQKQLDIFRRDLGRFFGIS DSILLEAVLFSGASWSRPGNTTHESHFPEVLGDLLALQGISIPVDRTNIIIDTEDKFEEY AKARCVYGICNKRGELLRIGQTIDLLTRFPKHISKLKKEEYPSMKKYLKGTDRFGKDYYF VLLALEPEKLSGLQSATWRYYAETKLILEEKTYKKGNSYNGKAIVTGDNLIPEHVQKEIL QYYHNIEL >gi|333758476|gb|AFIH01000001.1| GENE 34 33098 - 33988 869 296 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227872907|ref|ZP_03991211.1| ## NR: gi|227872907|ref|ZP_03991211.1| hypothetical protein HMPREF6123_1150 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_1150 [Oribacterium sinus F0268] # 74 280 67 286 699 96 32.0 3e-18 MKIHKPTVISLAFLAAVYLVMQWRGNTASVKKNSQSSSETQTEATKSDKEKGVDEAETSS ENTTPEVANPKAVYTAYLTLLKEKQKDIEAYTWQAYEEDKDGAPISVETKGIAVADVYGD STPELLFIDAEENNGEGAAIRANLHIYSFQDGKPVEIAKKENLDYQVGGGAVYNIFLTEK DKRLYLEQIDFDAKETDVLYLLPMSGNFPLEWDKQASYSYDPEKGLENDETSPKRSDEEF ILYDKPVEKADYYAFKKRIEEKNPKSLISNFGGEEKKETSALSYSEAISFLEKQAE >gi|333758476|gb|AFIH01000001.1| GENE 35 34127 - 34573 367 148 aa, chain - ## HITS:1 COG:no KEGG:Fisuc_2928 NR:ns ## KEGG: Fisuc_2928 # Name: not_defined # Def: nucleic acid binding protein # Organism: F.succinogenes # Pathway: not_defined # 1 133 1 134 136 138 51.0 8e-32 MKLYAVIDTNVLVSALLRWDSVPGAVLEQALVGSIVPLLSDEIMTEYEEVLRRKKFPFKE EDIQTVTDGIRMRGVFLDPEKLEENLPDPKDVILYAVTMEARKDSDAYLVTGNIKHFPLK PYVVTPREMLTILENGGKSLPEEANSDE >gi|333758476|gb|AFIH01000001.1| GENE 36 34577 - 34870 219 97 aa, chain - ## HITS:1 COG:no KEGG:Fisuc_1834 NR:ns ## KEGG: Fisuc_1834 # Name: not_defined # Def: addiction module antitoxin, RelB/DinJ family # Organism: F.succinogenes # Pathway: not_defined # 1 97 1 97 97 78 41.0 1e-13 MENGLLQLRIDDNLRKEASDVYSQLGLDLPTAIRMFLTRSVQVRGIPFSMILPEENYKAT AAVVAMKRMSSDAENAGVADMTLDEINAEIEAVRNGK >gi|333758476|gb|AFIH01000001.1| GENE 37 35297 - 36292 955 331 aa, chain + ## HITS:1 COG:SPy1834 KEGG:ns NR:ns ## COG: SPy1834 COG1396 # Protein_GI_number: 15675661 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 1 67 1 67 195 67 50.0 3e-11 MILADKIIELRKKNGWSQEDLAEKLDVSRQSISKWEGAQSIPDMNKILKLSEVFSVSTDY LLKDEIELDSPGETLKIDTESSLKEVSVSMEEANAFLEHKNQAASQIALGVLLCILSPSL LIVLSTLQESSLLSLSEGKAVGIGVLFLFLLAGAGVALFIKNSIEGDRFHYIEKELLNTA YGVNGMVQEKKSRYQGTYTSQMILGIFLCIIAASPIFISMIIFGEDDLHTALAVPFLLLF VAVGVFRIVKTNIIWDALNMLLEQGDYRREEKMDEYKNENVGQIYWCLVIAIYLGYSFIT RRWDISWIVWPVAGVGYGAVRGIVKSFRTKV >gi|333758476|gb|AFIH01000001.1| GENE 38 36487 - 36942 220 151 aa, chain - ## HITS:1 COG:CAC3531 KEGG:ns NR:ns ## COG: CAC3531 COG1943 # Protein_GI_number: 15896768 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Clostridium acetobutylicum # 7 151 5 149 157 194 64.0 7e-50 MAKKEYALAHTKWMCKYHIVFTPKYRRKIIYYQYKADIRDIIAQLCRYKGVEIIEGHLMP DHIHILVSIPPKISISSFMGYLKGKSALMIFDKHANLKYKFGNRHFWAEGYYVSTVGLNE ATIKKYIQDQEKHDIAMDKLSVKEYEDPFKG >gi|333758476|gb|AFIH01000001.1| GENE 39 37254 - 37850 337 198 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227873860|ref|ZP_03992082.1| ## NR: gi|227873860|ref|ZP_03992082.1| hypothetical protein HMPREF6123_2021 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_2021 [Oribacterium sinus F0268] # 1 197 4 200 200 235 60.0 1e-60 MKRNTYRDENGNCHWEITHYSPNPISALFVLLLFAGLFLFFYAHVGWDSSIWFIFALLIL CSFVALRELYQFFFQSYIVEAVFYEEEIVLHYRKGESRSIPYAGIGFIDFQLHDGTGSRI HFYPHFTFYKKNSTSKILDSIYRGDYLLFIGELSSFEDYLRIKQCLAEKEKHFFEPQETE ECFKRSRLTRKARRDAGV >gi|333758476|gb|AFIH01000001.1| GENE 40 37877 - 38380 621 167 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|291460640|ref|ZP_06600030.1| ## NR: gi|291460640|ref|ZP_06600030.1| conserved hypothetical protein [Oribacterium sp. oral taxon 078 str. F0262] conserved hypothetical protein [Oribacterium sp. oral taxon 078 str. F0262] # 20 167 14 161 161 177 54.0 3e-43 MSTQTIMIIAVVAVVWAIAFVVMLSMGKKRENSEKKFNEDNRDKGILHIYGKQIKVDGSD LANVPFTTGKDLETVVALAPGQHTIEGIFESTETVGTKTRNVKTEKLSFDLSVEAGHSYS AGMYFYSAEEKAQYSNGQAGKAILEIPLTIVEGSDYIKAYVLVYRED >gi|333758476|gb|AFIH01000001.1| GENE 41 38590 - 38883 277 97 aa, chain + ## HITS:1 COG:BH0639 KEGG:ns NR:ns ## COG: BH0639 COG4496 # Protein_GI_number: 15613202 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 4 94 5 95 100 96 56.0 8e-21 MNKKLDTPEVRHLFEGMQQLRGTEEYFRFFEDVCTINELLAIAQRYEVAKLLREGKTYID IAKCTGASTATISRVNRSLNYGEDGYRLAFERLEKKG >gi|333758476|gb|AFIH01000001.1| GENE 42 38965 - 40479 1724 504 aa, chain - ## HITS:1 COG:SPy0713 KEGG:ns NR:ns ## COG: SPy0713 COG4690 # Protein_GI_number: 15674771 # Func_class: E Amino acid transport and metabolism # Function: Dipeptidase # Organism: Streptococcus pyogenes M1 GAS # 2 503 9 472 472 485 49.0 1e-137 MACTTILVGREASYDGSTMIARNEDSGSGVFCAKKFIVVEPKDQGKEYVSMLSHVRIPLP KNPLRYTCMPNAVYEDEGIWGAAGVNSENVSMTATETIACNERVLSGDPLVVYKKAENGK PEQIGGIGEEDMVTLVLPYIHSAREGVLRLGELLEKYGTYEMNGIAFSDENEIWWLETIG GHHFIARRVPDNAYVMMPNQLGIDYFDFEDAFGEQAEFICSKDLKEFIAKNHLDLRFADE IEQTEGDWINPRECFGTHSDADHVYNTPRAWYMARYFNKNTFSFDGEAAELKPEDDDLPW CLCPEIKITPEDVKYILSSHFQGTPYDCYGKYGDEKDRGKYRPIGINRNNFLSLVQIRPD VPKEYAAIEWVCFGANTFNAFVPFYANVNKTPEYFANTTHRVTTESFYWANRIIGALADA QFSECKMHIERYQGKVPTKGYTLMKNLEEKLAKKLPKNAAVIKLLEECNEEIAKMVQEET DAVLDKVLYEVSCKMKNGFSRSDA >gi|333758476|gb|AFIH01000001.1| GENE 43 40722 - 42404 1646 560 aa, chain + ## HITS:1 COG:CAC0120 KEGG:ns NR:ns ## COG: CAC0120 COG0840 # Protein_GI_number: 15893416 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Clostridium acetobutylicum # 273 560 229 514 555 186 42.0 7e-47 MFKKWNQSSRLHFFSIGVIIMLLLTTMATVTSILSSKEADKTAEKRFALVTAAKQFSSAS VDLTRHARSYASTLNTNFLDKYNREITEYKNREKARETMNQYGINETEDTAMRTMEATSA HLADLETQAFTYAASGDSKNATALMYSEDYLSGEAEVQKQYKIFYDSIVNRTDKEMAGAI EVASATQILSIVLLIPSILFVLLMMLFVKKELMKPIIAIKETMTSLAEGQLSETKIDLPV NETEVGRTVAAIKGMNYRLKTIIQDLQNLLFAMADGNFRVESGCKEMYVGEYGNIYNALD RIHSKLKETLQGIGVASTEVNSSAQEMSHGSEILAQGSAQQASSLEELSATVSTVSDQIK SNAANAESASDLSRITEEELKESSSEMNALSLSMNEINGTAQQISNIIQTIDDIAFQTNI LALNAAVEAARAGESGKGFAVVADEVRNLAGKSAEAAKDTTVLIENTVRSIREGTEMADR AAASLEKLVKSSRQMNAKILEIAEYSGQQSNSVSEIAQGLEQISSVVQNNSATAEESAAT SAKLSDQSKAMDTLLKQFTL >gi|333758476|gb|AFIH01000001.1| GENE 44 42864 - 42971 57 35 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVCIECILVLSPLLHFEEEKFIIEESCGYSTSVVP >gi|333758476|gb|AFIH01000001.1| GENE 45 43012 - 43374 441 120 aa, chain - ## HITS:1 COG:lin2520 KEGG:ns NR:ns ## COG: lin2520 COG1393 # Protein_GI_number: 16801582 # Func_class: P Inorganic ion transport and metabolism # Function: Arsenate reductase and related proteins, glutaredoxin family # Organism: Listeria innocua # 7 112 7 112 117 112 50.0 2e-25 MNVLIAYDRCSTCKRAEDFLKAQGVSFQKRPIKEENPTAKEIHEMRERSGLPLKRFFNTS GLLYKSMNLKDKLPDMSEEEQEQLLSTDGMLVKRPIFLYGEKVLVGFKEKEWLLALGKSV >gi|333758476|gb|AFIH01000001.1| GENE 46 43427 - 45559 2086 710 aa, chain - ## HITS:1 COG:CAC0120 KEGG:ns NR:ns ## COG: CAC0120 COG0840 # Protein_GI_number: 15893416 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Clostridium acetobutylicum # 412 709 223 515 555 190 42.0 8e-48 MKLSVRMSILLGILTFVGISIVNFGTLRLTRLSFTDAMDQNMEDKAKASGEELAAIISKM EGVSSIIDSGIREMGNNAAPAWTVLDLNQEQQAVIPMKESSFRSRVVNKSISSLQYNAES VLIASLSGVVNANEYVTGAGVFFEPNAFLDGVENYAPYIGKANVQNRSIVNYPYEEFKDK PYYAETKEREKTVITDVYESTPDKMKVVTISRPVISKGKFIGAVLLEVDVNLFALAEQTD SRYPSMETEVVDEKQNIIFSKNKDLIGKSFSEEKGEKQFQKLETEMAKGKPFVLLEQTEQ DKTRRTYYVPTDIMGNVWWIVLSVHNGEFRAPITRIMMLCFALAGVGIALIVTGIYLMIK KTLKPLEGIARIGQKVSRGDFSERVSYVKEDEIGQIGKGFQEVMDHIKDITSDLQEKLAE LSQGNFRIDLNNEEKYQGDYRPLMLSMQDIRTALNSTMLEIQKSAGEVSESSEQVSAAAQ SLSQGVTEQASSVEEISAGMNEIAESIKSTTKKAEDAKNLSQMAGQAVMLSTQKMEEMSK AMAEITEKSNEIGKIIKTIDDIAFQTNILSLNAAIEAARAGAAGKGFAVVADEVGNLAQK SAKAAQNTGELIEETKDAVERGARITRETGESLSTVVERAGKINDMIFEITKETERESQN VGQLTKGMEQISSVVQTNSATAEESAASSEELSAQASLLDKLVSKFRLQE >gi|333758476|gb|AFIH01000001.1| GENE 47 45882 - 47252 913 456 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227872906|ref|ZP_03991210.1| ## NR: gi|227872906|ref|ZP_03991210.1| conserved hypothetical protein [Oribacterium sinus F0268] conserved hypothetical protein [Oribacterium sinus F0268] # 315 455 210 344 345 122 47.0 5e-26 MFCGYCGFKNEDGAVFCGRCGKRLEGEENAAHSVPSPASPEQKPENVQMKQADSLPPKMA AVPQERIAEPPLPKIPEPIPVEKPKKKKGCLLPLILFFIFLLLLGGGAVWGYLNFFKKVS IPLDGYLNVRFEGPSGYAKGVTEIDWKALEGDYGDKLHFTNAAKEDGISRKYDSPVDYLE EAISPPTLEKTEGISDGEQIEYKWDINEEELSSYLNCKFKYADKKVKAHIDEKATEEDIF KKIDIQTVGYANGQGYINLEDLPEGIEAEDFTIEPNSNLSNGDTVTISLKQDPSYYLEKC GILPSKTEMSYTVSGLIEETTAAPETAAPEETVAQAAVPGAEAYGGGTMSGAAIASSGDY ICSFSASRLITKQDVDALMTVYPNTYFPGERSVTQMVVNEMYARHGYVFKDQALNDYFNQ YAWYRNNPVRNPQMDSIYPQMSAIEKQNVDYLKTFH >gi|333758476|gb|AFIH01000001.1| GENE 48 47301 - 50123 1952 940 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227872907|ref|ZP_03991211.1| ## NR: gi|227872907|ref|ZP_03991211.1| hypothetical protein HMPREF6123_1150 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_1150 [Oribacterium sinus F0268] # 237 441 505 695 699 85 29.0 2e-14 MKKNRVFPVLSVLCLLGLFYCAVRTGTTKSLPLEEHTEEEREQVVNEEAYQAYLPILLSE KKAILQYNWGNESSDENGESDAVEEGSPSIAFSDINGDGVKDLLYFKAGTAEDGTEDAVL TIYSYYDGSLHKVYQNAGWDKKGQGNHYCLYKVEDSNALFYYFQEGDSESYVQLTEEFAQ DNKESATEERIRKKEDYAEILFSNLQDESLPLFSYERKHQETAMPYAKTLSFLKENASVE MKEEAEKEVPEWSQAFFQYVVQERQQLSVLYDTADPVMALWDMDGDNVPELIIGNNETYG TYSYAKVIKYTGDGFQELEGGMDSYGMTFGASHTADPDYPGLYFHYWRRGEGVDTDGDGF EDKDLYRIQYCYIDGNEIKETDVATYTEEEDYYGNSDQVIEYDKLCEDDGLFQATTVSPA RRLQFVTLNDIMDMGWTAFVQLNTIDTNLYNVEYSEVVHKAKIVTKAEDDAHFDVRSYMT EEDKEKHLGSYIMKAPVSISFYWNTKRMFSGNGGEYNADEAKLASVLSEAVKNGKKEIED CYKTLSFGKIETHDGNDSMHPNTRASFAATRYSYMEDDYSPFEERMLFLISLGADETEYH LPLDFRRMQAEMERDSEAIYEEFSSLYDAFSVDNPYTIAKKTSYLVFISGEGRCGAVADA LGKKFLDNGWDSSSVRVYSFNAPNFVSKKQADDSLPIFNILNTEDLSVQYPADFCRYGSN YFFKGGGSSENHNLSEMMKKLDKEEPKKKTKRDKEYRRVSLSGDAEIQALDEKGRPMAIS GNLGVQYGKNSPVRFYKEGSKRYLLAPKDLPFSLCIKGVKEEELSLEEAVLSEGEEEEIR QFEDFPIHEKRVYFTEIIPDAKKPGKLYIIRRKWRNTLERLFYGKDMEIAVGQVLPNGKL SLFFAFSKLCIIFTTAFVVCLLLTLCYRLKSGKSLKKEKR >gi|333758476|gb|AFIH01000001.1| GENE 49 50156 - 50590 283 144 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|210617175|ref|ZP_03291442.1| ## NR: gi|210617175|ref|ZP_03291442.1| hypothetical protein CLONEX_03664 [Clostridium nexile DSM 1787] hypothetical protein CLONEX_03664 [Clostridium nexile DSM 1787] # 1 136 1 102 103 68 31.0 2e-10 MRCPNCNHEVKEGMLFCQQCGTKIEAVRTPVEAVRIPTEAVRTPEEAVATPQAVNGQEGT IPTEKVQKSPVKNAPVEGGTFGWAVLGFLLFPVGLILFFIWRREYPKRAKSSGKGAFLGF VLLILLYIGNIAMQYFIYQSFFNY >gi|333758476|gb|AFIH01000001.1| GENE 50 50675 - 52021 897 448 aa, chain - ## HITS:1 COG:no KEGG:Athe_0718 NR:ns ## KEGG: Athe_0718 # Name: not_defined # Def: KWG repeat-containing protein # Organism: A.thermophilum # Pathway: not_defined # 66 429 43 375 449 98 28.0 5e-19 MRKERLTLGLFLCTAVFFLSGCDKRFLTPKFSKKAVEDSLTAYEKLFVGAPHLAYDKEGR GGYINKEGEWVIEAQYLAVKPFREGYAAVQDADTELWGYIDVHGKTVIKPQFMEAGSFIN GSTAVMEPEGGFGIIDKRGKFIVEPIYRAISYFKEGFARAEDMETGECWLLNEEGEKVFG PYKDACLFHNGKALVTETEKNRDWFYIDKKGKKYPFNEEVQIVMVKRYGEDDFWTENAYV DFSEGYPELINDNYVAVNEKGEAISPEYTYLHFFEKNGYAMAAIQEGEDKFYGVVDKQYN WVIEPEYYALYNFQYGYAIAEKKEWEEGGRVDYVVMDLKGNVVFTDWKEDEIILYPASFL SKGNPLPAYTVKNDARKHGYIDWDHSILIPFKYDATYSFAEDGSYAVVEKNGLYGMIDKK GNWILKPKFVGFIEKPEDSHWEYDMGLS >gi|333758476|gb|AFIH01000001.1| GENE 51 52055 - 52957 945 300 aa, chain - ## HITS:1 COG:sll1681 KEGG:ns NR:ns ## COG: sll1681 COG5279 # Protein_GI_number: 16329385 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Uncharacterized protein involved in cytokinesis, contains TGc (transglutaminase/protease-like) domain # Organism: Synechocystis # 166 296 155 291 507 62 27.0 2e-09 MKKFVKRRICGALLVLLPFLCNIKSYAYFRDRIERDTMDYIRYADENPDLYAAYGYDGDK LYEHYKNSGKEEGRLAHCLYYRPDKQSIYMWGWNAENLDTERYARENPDVVAAIGTNPEA LRTHFLEHGLLENRKGYGLPYEDDNTRAKGMIFDVAAQITNDSMTDREKIKAVHDWIVHH TNYDKENYDRGTIPDESGHIEGVMLKGIAVCNGYAETFDCFMYVLGIEHEMVDGWADGST PNGRHAWNRVLLDDTWLYVDCTWDDLSHQVGKDVIRYNYFLCTESEIAQDHTARDSYKVY >gi|333758476|gb|AFIH01000001.1| GENE 52 52975 - 53364 261 129 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKERKRLLVFGALSLFSACQLCMTSFAGNWVKNGTVWEYHENGVKVVNRWVQDNGKWYY FGKSGAMAHNQCVDGYYISSDGVWRKNETERDVKKSGRIIQSDREVARDFGFAVDDYDSD DTEFDVDWE >gi|333758476|gb|AFIH01000001.1| GENE 53 53447 - 54211 712 254 aa, chain - ## HITS:1 COG:no KEGG:Closa_1057 NR:ns ## KEGG: Closa_1057 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 8 127 3 125 336 99 41.0 1e-19 MKKMNWAKIMKVCAATAVCTGAFTLSAFAGNWVKDATGWWYDYGNGTWPSNSWQWIDGNN DGVAECYYFDRFGYCLMNTTSPDGYQVNGSGAWVENGAVQTRNVAGTQVNNAGQNATQSV SSKKSGLTLFNTEPILQGGAWKYESAVSNRENKSYTKVIVFSYNDYIEFDNSAGYTHFKA TVFPKKGDWGRDDRMLLQVLSGDEDEFYVTDDIYYDTRAFDIDVDISGYDKVRLKSTSVS GTYAYIAIANARFE >gi|333758476|gb|AFIH01000001.1| GENE 54 54397 - 55944 750 515 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227872909|ref|ZP_03991213.1| ## NR: gi|227872909|ref|ZP_03991213.1| hypothetical protein HMPREF6123_1152 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_1152 [Oribacterium sinus F0268] # 1 497 1 537 555 467 48.0 1e-130 MRNICQRDIFFYMNEELRIPQKVMCSIFNKVRQGNMVETRISEIKQGKRRGYRGLKEAAL PCFLECFQESAEEEAFRKLLNFVHREELYFPDAERKEDDSFQSYALRFLECGLANCEVPG KEALLQSGSESDEKAGESGECPAVDGAEGTLLYREVHSADFSSVESLLEKLRRNWKYLLF VAFCFTTVFLSFSFFSTNGINLFLDLLHLSPGIFIPLTLFLALSPLPFGILDVGITLYSY KKRNPEADISLREIYYIGKYGDKTRVLPGKGRYDLCPSLIVYSIGCNLIGSLSAIAIFLF LRTMPDFSDYVLRGKFTSMANIALAFNMLTTFAHTFFLFTREPMTKFREKEENPDTKRAD RLHVISNNLYMIYSMSFSAIGMILAFLYSYDFAQSEKLSLSPSFAFAIFAVHAYLWFSSC SPYAVEFNAECAGSFLFLSPIVVIISSLSTFLCFQTGIGSTMVNLANFLAVVTWLQCFLK NGAEKSILPFIRMHRAYFVLYILLFFLFYLLSIHL >gi|333758476|gb|AFIH01000001.1| GENE 55 56094 - 57368 1600 424 aa, chain - ## HITS:1 COG:SPy1896 KEGG:ns NR:ns ## COG: SPy1896 COG0544 # Protein_GI_number: 15675709 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) # Organism: Streptococcus pyogenes M1 GAS # 88 351 115 382 427 142 37.0 1e-33 MRKKKIFTVALILAMCVFAASCGKKEGTKKESTKKEAVKKDKKDKASESEVSESDVASPS TLTEDSPEIKELENMKVPEEPKLSEMGKITLPDLKTITVTVAPAGNVTQEEVDAAIQQAL SEDLVTVQEAAKEGDTVNIDYSGSIDGKKFDGGTAEKQDLKLGSGRFIPGFEDQLIGKKA GDKVTVKVTFPEQYQNAELAGKAAEFAVTVNEVKREPELTDEWVKNYEGTKAETVAAYRE EIRKRLQAQKEYRYHSDIQDQAMQQIFDQAKVEPSEKLTEYAKAYYLNARLNEYKQYGMG PAQVINMSGMTVEEFKENAYANADSYAKQLFIMRKLADAQNIRVTDALIDKLAEAESSLT GEETNRIKLIEQYGKELVEEASLRYAVMEYVETQVQVKEEDPTAETQTNTEETSKSSTKT ETKK >gi|333758476|gb|AFIH01000001.1| GENE 56 57465 - 58856 1541 463 aa, chain - ## HITS:1 COG:CAC1091 KEGG:ns NR:ns ## COG: CAC1091 COG1362 # Protein_GI_number: 15894376 # Func_class: E Amino acid transport and metabolism # Function: Aspartyl aminopeptidase # Organism: Clostridium acetobutylicum # 26 461 19 462 465 410 47.0 1e-114 MGKTEGQKLEEKLCFKPKHIAKDHPKEIEKAIEFAEGYKTFLDHSKIERECVQYSVAMAE KAGYKPFGRGIKGKSGDKFYYVNRGKNLFLVTLGKKPLNEGIHFNIAHIDSPRIDLKPNP LYETEELAYFKTHYYGGIKKYQWATIPLALHGRIMTAEGKAIDLDFGEKEGDPVLVITDL LPHLGRSQGERKLSEGIKGEELNVLLGSLPVEDTEVKEAFKLKILSILHDQYGITEKDFM RSELTLVPAQKAVDVGLDSSMVGAYGQDDKVCAYTALMAELESKNPEYTSLTALVDKEEI GSTGNTGMESDALLHFIEDLAECEGERVRDILRNSLCLSSDVNAAYDPTFSDVYEKQNSS FFNHGPVLTKYTGVRGKGGSNDASAETMQKVIGYMEEAGVPWQIGELGKVDEGGGGTIAM FMGNMDVDTVDLGVAVLSMHAPFELTAKLDVYYTYKAFLAFNK >gi|333758476|gb|AFIH01000001.1| GENE 57 59042 - 59770 690 242 aa, chain - ## HITS:1 COG:slr1377 KEGG:ns NR:ns ## COG: slr1377 COG0681 # Protein_GI_number: 16329775 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal peptidase I # Organism: Synechocystis # 11 241 10 188 218 102 29.0 9e-22 MTEIQQKNRNSRKKPQSFLGELFEWIKIFLVAGIAAFLLNNFVIANSTIPTGSMENTIMA GSRVFGSRLVYRFGEVKRDDIAIFLYGYKCRNDGTTYRESDQGVCPTCGREDKRNQPIYY VKRVIGMPGDHIEIKKTGEVEASYITKLNVRSASGKIPVGTVYVNGEAIQENYLPEPMIV DGNQFPEVDVTVPEDCYFMMGDNRNNSADARFWGENQFVKREKMLAKVYICYWPLNRMGL VK >gi|333758476|gb|AFIH01000001.1| GENE 58 59783 - 60124 373 113 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227873132|ref|ZP_03991424.1| ## NR: gi|227873132|ref|ZP_03991424.1| hypothetical protein HMPREF6123_1363 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_1363 [Oribacterium sinus F0268] # 1 111 1 111 115 128 64.0 2e-28 MEKKILYINKKDADKVRGVHGIALLRKVKILKITEEERDTLPEEAELLKFIGFSSQEVGN FLQDMKKLGIRVNLKCMETENNKNWSLLELYRELEEEHAYMTQQRKPEEGKTE >gi|333758476|gb|AFIH01000001.1| GENE 59 60128 - 61045 823 305 aa, chain - ## HITS:1 COG:lin1226 KEGG:ns NR:ns ## COG: lin1226 COG2267 # Protein_GI_number: 16800295 # Func_class: I Lipid transport and metabolism # Function: Lysophospholipase # Organism: Listeria innocua # 9 305 8 304 306 142 33.0 6e-34 MEKREWYRKASNGLGRIYAQVWQEEKIKEKKGIVCIIHGMQGHSTSYTYLFKALAKAGYI ACAQDLQGHGKSAEIPGYFGESDGFSSILHDLHRMLIQIKRWFPGLPVFLFGHSMGSFIA RDYAVQYSGEVSGIILSGTAGPNFSLQGTLGYLNVQMLLRGGKADGNPEGRFLAKYFCRG IRKPETLLDWICTDREVIRKKVEDPLTVGFTLGAYRDLVEELIKVNRNTEILKLKELPIL LVSGGADPVGEYGKGPATIYGILRAAGNQKAELRIYPGLRHEVLNEAVREELIERILQFL KKNGR >gi|333758476|gb|AFIH01000001.1| GENE 60 61344 - 61715 222 123 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227873135|ref|ZP_03991427.1| ## NR: gi|227873135|ref|ZP_03991427.1| hypothetical protein HMPREF6123_1366 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_1366 [Oribacterium sinus F0268] # 1 94 6 99 115 119 59.0 5e-26 MLICPICDSTLINRFCPLCRKFVKEPWVLDDHVYINRSHSLPDDFCEFHGNGRKVTYLNR TADKKSPLISGKVNAMPKPSSYSAKPTTNSLSQKARVSGFSGGTDAFHAAFSKPGQNNVP RKK >gi|333758476|gb|AFIH01000001.1| GENE 61 61792 - 62745 1119 317 aa, chain + ## HITS:1 COG:FN1549 KEGG:ns NR:ns ## COG: FN1549 COG0330 # Protein_GI_number: 19704881 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Fusobacterium nucleatum # 1 299 4 292 294 317 59.0 2e-86 MPIVIFLIVLFLIFLSTIRIVPEACAMVVERLGSFHSVWRPGVHILIPFMDRIAKRINLK EQVADFPPQPVITKDNVTMRIDSVVFFVITDPKLYAYGVENPIAAIENLTATTLRNIIGS MDLDTTLTSRDEINTQMRSLLDVATDPWGIKVNRVELKNILPPDAIREAMEKQMKAEREK RESITLAEAKKQSAVLTAEGNKQAAILNAEADKQKTILAAEAQKEKEIREAEGRAQAILD VQRAEAEGIRLLKEAGADDAVLRIRSLETFAKVSEGKATKIIIPSDIQNMAGLLNSLKES LVSPSTVHPTENGNEEA >gi|333758476|gb|AFIH01000001.1| GENE 62 62742 - 63662 762 306 aa, chain + ## HITS:1 COG:PM1555 KEGG:ns NR:ns ## COG: PM1555 COG0561 # Protein_GI_number: 15603420 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Pasteurella multocida # 2 288 10 259 270 100 30.0 5e-21 MIKIIFFDIDGTLRPFETGVVPESTKLAIKKARDAGIYCAIATGRHWVEIHNEGLVDGMY FDAFVTLDGGYSYILKEDKAKAHFAVNPGKKPKEYQFLMDVPDEELPYFDPKYGEVLLKE SIPASMVNQLLQFLEKDPFPVLFLEERRLYANFVNEDLLRTLAYVHTGLPPLLPLSEATK NEQLMLIPILHANQVPEIEKTLPDCHLIRWSDGMSFDIAKKGVSKIHGIQKIIERLGISM EEVAAIGDGWNDVEMLDSVGLGIAMGNAKPETKAVANHITDHILEEGLPKAVDYILDLNE MSQASP >gi|333758476|gb|AFIH01000001.1| GENE 63 63751 - 64020 347 89 aa, chain + ## HITS:1 COG:STM3100 KEGG:ns NR:ns ## COG: STM3100 COG0325 # Protein_GI_number: 16766401 # Func_class: R General function prediction only # Function: Predicted enzyme with a TIM-barrel fold # Organism: Salmonella typhimurium LT2 # 8 89 11 89 234 63 47.0 8e-11 MQKEIELVREKIRLACDRAGRDSETVLLLGVSKTKPYSALQEAYSYGIHDFGENKVQEIR EKYEMMREDSLMKDCPPHFHMIGTLQKIK >gi|333758476|gb|AFIH01000001.1| GENE 64 64017 - 64454 385 145 aa, chain + ## HITS:1 COG:aq_274 KEGG:ns NR:ns ## COG: aq_274 COG0325 # Protein_GI_number: 15605814 # Func_class: R General function prediction only # Function: Predicted enzyme with a TIM-barrel fold # Organism: Aquifex aeolicus # 1 144 86 228 228 127 50.0 6e-30 MKYLPGKVVLIHSVDSLPLSLEIEKEYAKKETTAKILLEVNVAKEASKSGFSLEELEAVV AELEKLPHVLVCGLMTVAPFTEDAEKNRPVFRSLREALFSLQKKFPALPLTELSMGMSGD YEVAVEEGATIVRVGSFIFGERVYL >gi|333758476|gb|AFIH01000001.1| GENE 65 64451 - 64996 521 181 aa, chain - ## HITS:1 COG:SPy0357 KEGG:ns NR:ns ## COG: SPy0357 COG1418 # Protein_GI_number: 15674508 # Func_class: R General function prediction only # Function: Predicted HD superfamily hydrolase # Organism: Streptococcus pyogenes M1 GAS # 6 161 5 155 166 66 26.0 3e-11 MRVKREQLEFLRKFRYIVENEEYKKLKNVPRHGSTNTYAHSVRVALMAYKLAKKWHMDAD SAGKIGLLHDFCMIDYHKDDGTSHDGRWYCFYHGEDAIENSEKQNFYLNHVEKRAILTHM FPLSTRLPNSRLAYLLTLSDKTVALQESLQNIVIAFARLRYRTIVVQKRVAQYLRTKLSF S >gi|333758476|gb|AFIH01000001.1| GENE 66 65211 - 66710 869 499 aa, chain + ## HITS:1 COG:STM4541 KEGG:ns NR:ns ## COG: STM4541 COG1368 # Protein_GI_number: 16767785 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily # Organism: Salmonella typhimurium LT2 # 37 490 24 460 750 158 30.0 2e-38 MDEKEPEKEIEKKEDGGNPKQKKFGIWKIFLTGLVFLFALLSFTLYFSLQFLLRNWNELT VDEILYHIKSPMRGAGPHLVQLFLLSVLLPSVALFLLLLLIYLFSKRRFLPLYFSIGFFV FVLTIGNAWDSISLGSYILSQIQSSSFIEDHYVDPKGLSLHFPEKKRNLIYIYMESTELT FMDEAHGGAFPENLLPELCALGKEGEDFSAEGEIRNGGIAMPGATWTMGAMFAQSTGLPL KISIEQNSMDSQEHFFPSVTALGDILEEEGYTQKFLLGSVGYFGGRELFMKDHGNVAVED FSYWKRKNKFPRDYWVNWGFEDEKLFTYAREELLNLAKNDSPFNLTLLTVDTHFPDGYVC RLCKNTYPDNQYANVFNCTSRQVNDFISWIKEQDFYENTSIVISGDHPTMDRDFCNAVDP SYQRKVYTCYLNAAASVKEEKHREYSTFDDFPTTLAALGVEIPGERLGLGTNLFSGLPTL TEEFGKKAEKKSLKNAPTL >gi|333758476|gb|AFIH01000001.1| GENE 67 66707 - 66811 75 34 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIRLGGIDKNSAFKQKEEKEQKKKEQKKEERKKS >gi|333758476|gb|AFIH01000001.1| GENE 68 66919 - 68670 1041 583 aa, chain - ## HITS:1 COG:VC1370 KEGG:ns NR:ns ## COG: VC1370 COG2199 # Protein_GI_number: 15641382 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Vibrio cholerae # 405 581 262 441 443 78 28.0 3e-14 MRGIRSLYNENKTFVLLFFSVLAGILILRLFLSVWGKIPADEYRILNKICVEVRHEDGTV DCFDSHLFNFSSEKDRITIRIPLEKSWKKEHQSINFFFYNSEIKAYYKDELLASYGTNLK RHMIGHIRVAIPVPEEAFGEEIRVEITPKIHFMENNFDEPVLMSERDALFFSIIGLETSY AIFVMTLIATFIAMVAFAVFSLRHHYAREGFWLTTMIFAITFWHLGNSGMMYMLTDCEDL NAVSEYIGMYLLLSAAPLYASHETERPRVRRFLKISGGILFSFFVLTLFLYFLPTGYTYV WHLRIAQGVQIVMLLSTVLSLMFPGRMVKSNSDRILGFGLIFVALLGIMEQVRLILSARV SEKWPRFMQLFVKIHYSKVLILVMIFVFITAFSFKLIMVMQKAMEDEHLRVLAFTDNLSG MGNRQFLQRKIDLLDSQRATGYAVIFMDINDLKYTNDHFGHDCGDKLIKMVSTAIKGAVD NANGFCGRSGGDEFLAVIFPEHLVVNVAKQIREDLESIKEREKVPFPVSLSIGVAGYSEL AAEEHLAEKEFISADYVIRKADKRMYKDKCKYREQRDKAAIKA >gi|333758476|gb|AFIH01000001.1| GENE 69 68767 - 70503 1129 578 aa, chain - ## HITS:1 COG:AGc1815 KEGG:ns NR:ns ## COG: AGc1815 COG2199 # Protein_GI_number: 15888332 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 376 574 142 339 346 77 30.0 1e-13 MKNRILLKINKGVIPVFAVFFVAFFLLYTTFSMNGVENNSYTRLSEMKVDVKHEDGTVDS FNSNMFNFQSKNDKITIHLPLDEKLRKENQSINFFFYASVVKAYYKDKLLVSYGEDVKRH MIGHLKILIPVPMEAYGDEIRVEIQPTMDFMEDTFHFPVLMPIQDALFFPILGKETSFSF FYMVLIGTFFAIAFLACQYFLQDYAKEGFWMMILINSIIAWYMGNTGMIYAVNANEDFNA IVEYIGMYMLFFSAPLFASYETVRPAVKKYLRFMGKLLFGVFALCLILYLLPTGYTFVKY LRVAQGIQIVMVFSALLSLLFPGKKAASMAEYIMQYGLIFVSLFGILEQIRIICATKITE DFPPILRWFAAAPFSRWLLYMLVLTFLSSYAFKVSNVVQKTLEEKNLKILAYTDNLSAMG NRQYLQRKLDILDKSRNRDYAVIFMDINDLKYTNDHFGHEEGDHLIRMVSSSIKKAMDNM SGFYGRNGGDEFLSVLIPANKATEVVKQINANLQKIKEEEKPVFPVSLSLGIANYREVEE ERRFSGLEMISSSDVIRKADARMYEDKCVHKKKHPLVS >gi|333758476|gb|AFIH01000001.1| GENE 70 70616 - 72220 872 534 aa, chain - ## HITS:1 COG:SP2107 KEGG:ns NR:ns ## COG: SP2107 COG1640 # Protein_GI_number: 15901922 # Func_class: G Carbohydrate transport and metabolism # Function: 4-alpha-glucanotransferase # Organism: Streptococcus pneumoniae TIGR4 # 3 529 2 495 505 382 40.0 1e-105 MDKTRSAGILMPVFSLPGEYGIGSFGKDAEEFIDIVAETGNRVWQVLPMGPTSYGDSPYQ SFSSFAINPYYIDLEGLKEEGLLTEEELKEEKEAFLSSGEKIDYGLLYQRRYPLLRKAYE RWKAAGGNPDTLIAGRRRENLDYCLFMALKDFSEGCAWPDFPKEFRDKEESALKSFLEEH KDEVTYYAFMQWKAEAQWKAVQDYAHERGVLIFGDLPIYCAMDSADVWGNRKIFDFSWEG RKLKKEEPEESSEQEQEKEKQDIHSAEEESYPGFVAGVPPDAFSATGQLWGNPLYDWEEQ AKDNYSFWCKRMEYCFSLYDLIRIDHFRGFEAYYAVPFGEETAVNGSWRKGPGIALFDAL HRYFQKESLPVIAEDLGVITEEVRELMRKTAYPGMKVLQFAFGGDYENDYLPHMFQDNNS VMYTGTHDNDTLRNWFETLGEEERNKIYRYLSRSQNDWNAMTELLIKEALSATSYLCIIP AGDYLELLSEGRINAPGTDAGNWQWRMKKHAFSPERKKIMRDMLETYGRRTDKR >gi|333758476|gb|AFIH01000001.1| GENE 71 72278 - 73003 409 241 aa, chain - ## HITS:1 COG:HI0434 KEGG:ns NR:ns ## COG: HI0434 COG1040 # Protein_GI_number: 16272382 # Func_class: R General function prediction only # Function: Predicted amidophosphoribosyltransferases # Organism: Haemophilus influenzae # 15 236 4 227 229 100 28.0 2e-21 MDYKEKWKEGILGALFPPRCIFCDEILEDGEDGICSSCREKEQFMEEPCCKSCGRGILRE EESLCKNCKRHHFSFSGGMILYHLTEEIEDAISELKYKGRQDKGEFFGRRAGEHFREKME ALGIQAILPVPIHKDRRRKRGYNQAEIIGKALAKACDLPLYADLLKREKKTKALKDLNPV ERLQNLLSAMDCEAIPEELKKIVLVDDIFTTGATMEACTRKLLERDIKEVYILAIAARAD R >gi|333758476|gb|AFIH01000001.1| GENE 72 72993 - 75266 1663 757 aa, chain - ## HITS:1 COG:CAC2854 KEGG:ns NR:ns ## COG: CAC2854 COG0507 # Protein_GI_number: 15896108 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Clostridium acetobutylicum # 1 735 1 732 739 534 42.0 1e-151 MEELEGNISHIVFRSEESGYTVFTIEDKGEETTCVGSFSHIAVSEKIKMRGRWKEHSVYG KQFSVEEYELLPPDSLSGIEQYLASGAIKGVGKAIAKRIVKKFKEDSLRIMEEEPERLAE INGISERKARDIAAELVGKKDRQDAILFLQGLGIGTQLCYKIYRHFQGEIYTILRENPYR IAEELEGVGFKRCDQIAKRVGIGEKSPFRIHAGISYTLLQGELQGHCYLPVSILKREAER ILDMEIALFEEELMDLQIEGRVRIQGERVYRAGTYFRERRVAAKLHALDVPEEEAYSESW NQAIEGLFRKENPELDSLQKEAVYLAAHSGILVITGGPGTGKTTTIKTILRLFTERGKNI SLAAPTGRAAKRMGEATNYPAKTLHRLLEYMGQEGEEEEEGFHRLFQRNEENPLDTDVVI VDEMSMVDLYLMDALLKAIQPGTRLIFVGDSNQLPSVGAGNVLRDILSSGCIKAIQLKKI FRQALESDIVVNAHKINEGKEPDLSKRSKDFLFIRGEQAEKIFSDIAVLMKEKLPKYLNI DTLSVQVMSPQKKGALGVESLNRYLQESLNPKDKNKAEKELYGRVFRLGDKVMQVKNNYQ LAWEIPGKFNIPIEEGEGIFNGDIGRITEINHFTETVTVFFDDKRVVYNFSDCEDLELAY AITIHKSQGSEYDAVILPMYRGPQILMTRNLLYTAVTRAKSCVCLLGDPRVFRDMIHNET EQKRYSGLREQLMEMKNSTPDRIENPFSNEEEASYGL >gi|333758476|gb|AFIH01000001.1| GENE 73 75340 - 76341 1079 333 aa, chain - ## HITS:1 COG:CAC2858 KEGG:ns NR:ns ## COG: CAC2858 COG1077 # Protein_GI_number: 15896112 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Actin-like ATPase involved in cell morphogenesis # Organism: Clostridium acetobutylicum # 1 325 1 325 340 399 63.0 1e-111 MFSLISNDIGIDLGTSSILVYIKGRGVVLKEPAVIAVNKDNNAVVAYGEDARLMLGRTPE NISAVRPLRQGVISDYTLTEEMLKYFINKAVGRRTLRKPRICVCIPSGATEVEKKAVMDA ASHAGAREVSIIEEPVAAAIGAGIDISKPQGNMIIDIGGGTADIAVIALGGPVVSESIKI AGDDFDEAILRYMRKKHNLLIGERTAEDIKVNIGCASKRPENVTMEVRGRNLVTALPKTV VVSSDEIMDALVEPASMIVNAVHNVLERTPPELAADIYERGIVMTGGGALLYGLDKLMQE KTGITTMLAEDPLTAVAIGTGKSIDMAGEDDDF >gi|333758476|gb|AFIH01000001.1| GENE 74 76357 - 76506 64 49 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPNKKKNSEIETRKNISLRILSLFSLSAILEEVTFYIPNCVYFHAARFL >gi|333758476|gb|AFIH01000001.1| GENE 75 76543 - 76947 275 134 aa, chain - ## HITS:1 COG:no KEGG:Cthe_1620 NR:ns ## KEGG: Cthe_1620 # Name: not_defined # Def: hypothetical protein # Organism: C.thermocellum # Pathway: not_defined # 1 132 1 132 134 189 67.0 3e-47 MKILIDTNILISAALSSKGVPYQAFVKAVSYPNHGLLCEQNIDEMRRIFNRKFPHKIQAL EGFLSLALLTLEVVSIPIEESEMEAKIRDVNDRPILRAAIHAGVDILLTGDKDFLESGIL NPKIITAAEFVKEF >gi|333758476|gb|AFIH01000001.1| GENE 76 76947 - 77219 228 90 aa, chain - ## HITS:1 COG:no KEGG:Cthe_1619 NR:ns ## KEGG: Cthe_1619 # Name: not_defined # Def: AbrB family transcriptional regulator # Organism: C.thermocellum # Pathway: not_defined # 2 87 1 86 90 93 60.0 3e-18 MMNQTFIDNAKVMAKGQVTIPKDIREILGVSCGDRITFVVENGSVRLINSAVYAMQILQA QMEGEAEQNDLSTDEAIMDLVKEVRAESVE >gi|333758476|gb|AFIH01000001.1| GENE 77 77373 - 77906 305 177 aa, chain - ## HITS:1 COG:no KEGG:lhv_1697 NR:ns ## KEGG: lhv_1697 # Name: not_defined # Def: hypothetical protein # Organism: L.helveticus # Pathway: not_defined # 7 174 3 170 172 221 65.0 8e-57 MISKESKLSLRLQDREFPFAYIDHDREIARGIVFDEEKNFYFVRIHRDDSFGKATLIETA GGGVEKGESLETAIKRELKEELGAEVEILQEIGIVSDYYNHVHRHNINHYFLCKVRSFGE KNLMPYEIRDFHMETLKLSYEEAIKEYEKCSNTKLGRLIAQREVPVLEEVKKMLLIN >gi|333758476|gb|AFIH01000001.1| GENE 78 77896 - 78171 214 91 aa, chain - ## HITS:1 COG:FN0497 KEGG:ns NR:ns ## COG: FN0497 COG2026 # Protein_GI_number: 19703832 # Func_class: J Translation, ribosomal structure and biogenesis; D Cell cycle control, cell division, chromosome partitioning # Function: Cytotoxic translational repressor of toxin-antitoxin stability system # Organism: Fusobacterium nucleatum # 3 88 4 89 90 99 51.0 1e-21 MSFRVVFSDKALKQMKKLDKYTASLILAWLRKNLEGCEDPRKHGKGLTANRSGQWRYRVG DYRIIAEIQEDKVIVLVLGIGHRRDIYQNDI >gi|333758476|gb|AFIH01000001.1| GENE 79 78168 - 78389 231 73 aa, chain - ## HITS:1 COG:no KEGG:HS_0447 NR:ns ## KEGG: HS_0447 # Name: not_defined # Def: hypothetical protein # Organism: H.somnus # Pathway: not_defined # 1 72 1 72 73 67 51.0 1e-10 MTISLRLNEADSMLFKKYAEMNGISVSELLRRSVLEHIEEEYDLQAYQEAIEEYRENPIT YTLDEVEKELGLG >gi|333758476|gb|AFIH01000001.1| GENE 80 78513 - 79379 626 288 aa, chain + ## HITS:1 COG:CAC2986 KEGG:ns NR:ns ## COG: CAC2986 COG0030 # Protein_GI_number: 15896238 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Dimethyladenosine transferase (rRNA methylation) # Organism: Clostridium acetobutylicum # 10 282 6 274 276 248 48.0 7e-66 MAKLVDSKETIAVLQRTNFQFKKQFGQNFLIDSSVLDHIISYAKIQKEDLVIEIGPGIGT LTEALCEHAGQVIAIEIDDKLIPILEENLAGKENFRLLHQDVLKVDFTELLKEYPSFSSV KVVANLPYYITTPILMDLLEKKLPLKSITVMVQKEVALRMKAAPGTKDYGALSLAVQYYS EPAIVQEVPPHCFIPRPNVSSSVIHLRLHKKAPVSVQDPALLFKTIKFSFMQRRKTLVNA LASGFHLDKRQLQDLLSSLSYPENVRGETLSLADFSLISDGIREILSR >gi|333758476|gb|AFIH01000001.1| GENE 81 79368 - 81854 1881 828 aa, chain - ## HITS:1 COG:no KEGG:Closa_3992 NR:ns ## KEGG: Closa_3992 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 18 795 7 792 825 395 31.0 1e-108 MNTGFYKKKKFLTKKKVRILALSGIFLVALLFYFIHAYRSMDKNSRVYANMGESKLPYVY VLMGEKKINPMHGYYQEIEGSAVRNSIAILPADRRLELLVEPKKNTISSAHYSIRSMDGT DLLEKDGEAELSKEGETLKLILPIQNLIAEGKEYQLRLSLEMGENTIYYYSRILLGKEKM AEEMLALGEDFTRKSFSKSEARSLSTYLESDDTMDDSDLSHVNLHSSFQQITWGDSGMIL DGEPEISLKEIDGIMGMVQLRYASSAIDENGNTRRFFNEDNFVMRYDSQRIYLMDFDRRS TEIFDTQKFRLGDKNILLGVDSTEDIQAKYSETKNFYAFSKGNALYRLGTGRDLTRIFTY LTEENNSFRGDFLDHGIRIMDVKNNGDVDFLVYGYISRGRHEGYLGLVFYTYDNSENTVV ENFFLPLMENKEELEESLSGLSYHAGNKMFYLYYSGTVYGIDTNSFEVLSLVSSLKKDEL ASSESGQFLAYGEKDGESELSKTVVLRNLKTDKSQNIFEENRLFKVLGFIEDDLVLGVTL PEESSEWNGQGEIPVSEIRIVAADSEVKLSYKKENLYFSNFTIAGNQLRFDEYSHDENGY HYAGKDSVLSNKEAEQGQNVKLESRQLGNMGKNYFLPLLGKSSESFTVHSPEKFSIEKAG SIELARERSVEEDGIFSYSLGHYRGRHENMESAISAVYDNFGYILDGKQEILWNRTDRPG VIIGKTREDEVTDFIAEIPDVRTILSSDKGRILNLYGVSLNAALYYTAKGYPLMIRIDGN WELITGYNGSQITTYVLGGSTSPRLLRKEDAAARYDTVHNAFYAFLPG >gi|333758476|gb|AFIH01000001.1| GENE 82 81868 - 82380 416 170 aa, chain - ## HITS:1 COG:no KEGG:Closa_4289 NR:ns ## KEGG: Closa_4289 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 36 165 37 166 168 145 58.0 7e-34 MSIIKEIGSHSFSIILLISLLLSLLSLFFAIKAEAKYKKLYRQYDYFMRGKDAETLEDYF VELQRHVEKSEDLLEDQREMLKVLHNNNRAAFQKIGIIRYNAYSGLGGNLSFALAILNYD NTGFVLNSVHSNEGGFLYIKEVEKGSTTVELGAEEKLALEEALGYRKKKE >gi|333758476|gb|AFIH01000001.1| GENE 83 82381 - 83259 974 292 aa, chain - ## HITS:1 COG:CAC3729 KEGG:ns NR:ns ## COG: CAC3729 COG1475 # Protein_GI_number: 15896960 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Clostridium acetobutylicum # 3 287 4 282 283 196 44.0 4e-50 MAKHGLGRGVDSLFAANPNKIEKKEAGEEAKLLKLSLIQANPSQPRKRFSDEELKELSES IKQFGVIQPLLVKRQGPLYEIIAGERRFRAAKLAGLTEVPVLIRDYDEKRSKEVAIIENI QREDLNAVEEALAYQSLITEYDLSQEELAERLSKKRTTITNSLRLLKLEEEILNYIREGK LKEGHGRALLAIPEGKKRLELAKECVEKNLSVREVEKRGQNQETQKKKDGRKALSKQFTS IYKDLESRMGENLGTKVKIVPKNESKGKVEIEYYSREDLERLYDLLEGKGRE >gi|333758476|gb|AFIH01000001.1| GENE 84 83301 - 84059 842 252 aa, chain - ## HITS:1 COG:BH4058 KEGG:ns NR:ns ## COG: BH4058 COG1192 # Protein_GI_number: 15616620 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Bacillus halodurans # 1 248 1 250 253 278 56.0 8e-75 MARIITIANQKGGVGKTTTALNLAASLGEAKQKVLLLDFDPQGNAGSGLGVRDAEKSIYE VLSGELPVEDILHTEIVENVDFLPGNRNLAAMDAELANEENKNYLLKDILDKMAKNYDYI FIDCPPSLGTLTINALTASDSVLIPIQCEYYALEGLSQMLETIQTVQEALNESLSIEGIL FTMYDSRNLLSQDVVRAVKEHFNVKIFDTIIPRNVRLAEAPSHGLPINLYDGSSTGADAY RKLAGEILEKEV >gi|333758476|gb|AFIH01000001.1| GENE 85 84163 - 84786 534 207 aa, chain - ## HITS:1 COG:CAC3732 KEGG:ns NR:ns ## COG: CAC3732 COG0357 # Protein_GI_number: 15896963 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division # Organism: Clostridium acetobutylicum # 1 206 40 238 239 185 46.0 7e-47 MNLTAITEEEDVIVKHFIDSLAMVKLNVSRETFSKWIEGRRCMDVGTGAGFPGLAIKIAF PSISLSLSDSLQKRIYFLEEVVRELGLKGVDFYHGRAEDLGKKPELREQYDLVFSRAVAN LSTLSEYDLPFVKKGGYFLAMKSKDISEELEKGKKAIHRLGGKLEEVLEYTLPETDIGRS LLLVQKIENTAKKYPRKAGVPSKEPLG >gi|333758476|gb|AFIH01000001.1| GENE 86 84786 - 84911 156 41 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAKEEFSRRLSALSKQLGVDLQEEQLQQFYSYYTLLVEKIR >gi|333758476|gb|AFIH01000001.1| GENE 87 85044 - 86933 1784 629 aa, chain - ## HITS:1 COG:CAC3733 KEGG:ns NR:ns ## COG: CAC3733 COG0445 # Protein_GI_number: 15896964 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: NAD/FAD-utilizing enzyme apparently involved in cell division # Organism: Clostridium acetobutylicum # 8 627 9 624 626 706 56.0 0 MSLIEEYYDVIVVGAGHAGVEAALASARMGMETLIFTLSPDAISMMACNPNIGGSSKGHL VRELDALGGEMGKVCDRSFIQSRMLNKSKGPAVHSLRAQADKQLYSQNMREVLENQDRVH IRQGEIVSILTDKEKKEVRGVESSTGAKYLAKAVIICTGVYLNARCIYGEVSEKTGPNGL RRAEKLSDSLRELGFPLLRFKTGTPARVDKRSLDFSQMEVQKGDVPVVPFSFSTDPASVQ IEQDDCFLTYTNEEGHSLIRENIHRAPMYNGSIEGTGPRYCPSIEDKVMKFPEKDRHQIF VEPEGRYTNEMYLSGLSSSLPEDVQIALLHTMPGFQKAEMVRHAYAIEYDCLNSLELKNN LETKRIAGLFFAGQMNGSSGYEEAAVQGFMAGVNAVKRLRGEEAFVLDRSEAYIGVLIDD LVTKENKEPYRMMTSRAEYRLLLRQDNADLRLREKGYSLGLISEEEIRKTREKRESIQKE VERMGNTYVGANEKNNAVLTALNSSPIQSGVSLLELCKRPECSYENLAELDPERPTLSPF ICEEVEIEIKYEGYIKRQIQQVEAFKKLEKKKLPKEMDYQNMQNLRLEARQKLDKIRPEN IGMASRISGVSPADISVLLVYLERYKKEF >gi|333758476|gb|AFIH01000001.1| GENE 88 87062 - 88429 1246 455 aa, chain - ## HITS:1 COG:BS_thdF KEGG:ns NR:ns ## COG: BS_thdF COG0486 # Protein_GI_number: 16081154 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Bacillus subtilis # 1 455 1 459 459 365 44.0 1e-101 MDTISALATALVESGIGIIRLSGEDALSIAEKILRTKSGKPLDIRESHRIRYGFVYDEEE AVDEVLVSTFLAPKSYTGEDVVEINCHGGVLLMQKIFTLTLKHGARAAEPGEFTKRAFLN GRIDLSQAEAVADLIASKTEAGIQSSLALVQGALGEKIKECRSLILEDTAFIEAALDDPE HISLDGFSEKCAQHTEYILQEIEKLLRFREEGRMLTEGIHTAIVGKPNAGKSSLLNALVG AEKAIVTDIPGTTRDMVEENIRLDGLSLHLMDTAGIRNTEDIVEGIGVEKAKKSIEHADL ILFVVDALKEFEKEDEEILSLVQGKKTIVLLNKTDRETVLTKKELEEKTDLPVIEISAKQ WTGIKELGEKIRELFFSGSLSFSSELFVHSERQRVDLEEAKRALLEVKNGLSLSLSEDFL SIDLMGAYIALGRILGEEVSEDLVNEIFAKFCMGK >gi|333758476|gb|AFIH01000001.1| GENE 89 88679 - 89716 777 345 aa, chain - ## HITS:1 COG:CAC3735 KEGG:ns NR:ns ## COG: CAC3735 COG1847 # Protein_GI_number: 15896966 # Func_class: R General function prediction only # Function: Predicted RNA-binding protein # Organism: Clostridium acetobutylicum # 176 322 62 207 209 125 50.0 1e-28 MDKIRVSAKTMEEAITKATIQLQTTSDRISYTVLVQGSKGILGIGAKPWIIEAFAKEEAE IALEEKKETASSAEKKQVEPKKEEKAEEKTENRENVQGKKEEKKEVLPKDKKATKKTTEA YKGFSRGGYDPIPAPREEKRERRENKAFSDTKSTEEAVEKKEFHALTVEEIAENKEKAKQ FLNSILTGMDMQVELEMDFHEENNELYINIVGPDMGILIGKRGQTLDSLQYLCSLVLNKE HKEDYLRVKLDTEDYRKRREQTLRSLAKNIAYKVKKTKKSVNLEPMNPYERRIIHASLQN DSQVSTRSEGDDPFRHVVIFFKNGGKFRQDRRFKNKYPKENRAEK >gi|333758476|gb|AFIH01000001.1| GENE 90 89735 - 91051 894 438 aa, chain - ## HITS:1 COG:BH1169 KEGG:ns NR:ns ## COG: BH1169 COG0706 # Protein_GI_number: 15613732 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YidC # Organism: Bacillus halodurans # 20 139 36 154 280 87 39.0 4e-17 MNYLILLTKNTWNFPVFGPVWNFIVSFLGMVMNVIYSFLEQVGIPNIGLAIILFTLVTRI LLFPTSLKQQKSSRMMQIMQPEIKAVQEKYKNMSDQASMMAQQAEMRAIYEKYGTSMTAG CLPLVLQMPIIFALYRIIMNIPAYVPAVKVVYESVSSAIGGADAAQALVTFGENNGLKSI LKTLHNLGLDDPQKYDSTAVHNFVIDFLYKLNPAQWAKLPEVFPKASSVIETAAAKSAEI NSFLGLNLATAPSAYGFKPNIYWLIPILAGLTQWASTVLMQKQSMPQTAEGDQSAQMMKS MNVMMPLMSVWFCFSFASGIGLYWIASSLFMLLQQLILNWYFGKKTNEQLLQEAMAKANE KRAKRGLPPIDEKAIENRLKSMQAKEDSEEKNRLDRIAKQSQKTKDSTEYYNKNAKEGSL ASKANMVQLYNEKHEKKS >gi|333758476|gb|AFIH01000001.1| GENE 91 91070 - 91309 99 79 aa, chain - ## HITS:1 COG:CAC3737 KEGG:ns NR:ns ## COG: CAC3737 COG0759 # Protein_GI_number: 15896968 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 9 78 1 70 71 93 60.0 1e-19 MIILEMERIMKKIFLGMIRFYQKFLSPLKGHGSCKYTPTCSQYAYEAIQKHGCVKGLWLA VWRVLRCNPFAKGGYDPVP >gi|333758476|gb|AFIH01000001.1| GENE 92 91421 - 91675 116 84 aa, chain - ## HITS:1 COG:SA2502 KEGG:ns NR:ns ## COG: SA2502 COG0594 # Protein_GI_number: 15928298 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RNase P protein component # Organism: Staphylococcus aureus N315 # 8 69 38 99 115 57 46.0 7e-09 MYVAENSLDYSRLGVSCSKKVGNSVVRHGIARKLREIFRLHKEIELGKDIILVVRQSAKD KSYFDFEKAYLELCSRHHIIGREE >gi|333758476|gb|AFIH01000001.1| GENE 93 91830 - 91973 231 47 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227873167|ref|ZP_03991458.1| ribosomal protein L34 [Oribacterium sinus F0268] # 1 47 1 47 47 93 95 3e-17 MHKGKMTFQPKTRQRAKVHGFRKRMSTANGRKVLSARRAKGRAKLSA >gi|333758476|gb|AFIH01000001.1| GENE 94 92434 - 93792 1226 452 aa, chain + ## HITS:1 COG:CAC0001 KEGG:ns NR:ns ## COG: CAC0001 COG0593 # Protein_GI_number: 15893299 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication initiation # Organism: Clostridium acetobutylicum # 12 451 9 444 446 395 47.0 1e-109 MTKELEIIKNKWNEILNMVREIETIADVAYDLWIAPLKPYDILEDRLIVLVDKKQFLDII NKRFKQTLRIAILDVTEINKEILFIDESGLDSLYKEDKKEELSFSDALKNANLNSRYTFD SFVVGSSNDLAHAACVAVAELPGEQYNPLYIYGGAGLGKTHLMQSVAHFILQQNRNAKIR YVTSETFINEFVDSIRNKNNISPAEFRKKYRELDVLLIDDIQFLIGKEGTQEEFFHTFNA LYDNRKQIIIASDKPPKDIDNLEERLRSRFEVGLIVDIQMPDVETRMAILRKKEELEGYN IDNEVIKYIADNIKSNVRELEGALTKVVAKSRLVKQPITLTLAEDLLKDHITPSERREIT ADVIIEIVAEHYNLNRLELASPTKKKNIAYPRQIAMYLCREMTDVPLVTVGELLGGRDHS TVIHGCDRISTDLRTNEQLQSTIENLRKKIAR >gi|333758476|gb|AFIH01000001.1| GENE 95 93932 - 95056 1033 374 aa, chain + ## HITS:1 COG:CAC0002 KEGG:ns NR:ns ## COG: CAC0002 COG0592 # Protein_GI_number: 15893300 # Func_class: L Replication, recombination and repair # Function: DNA polymerase sliding clamp subunit (PCNA homolog) # Organism: Clostridium acetobutylicum # 1 366 1 361 366 197 31.0 3e-50 MKLFFQKNDLVSAIQIVGRAVASKTTMSIMECILIDATEGQISLTGNKSEFGIETICPGV IEEAGKIALEAKLFTEIVKRLPQTEGNNLCIETEENGNCIIRCEKSVFKIMGRNAEEFPS LPSVEKQEAITVSQFSLRNMINQTIFSTANGENNKKMAGEYFEIKDNLFSITSLDGHRIS IRKTFLKDSYSEQSAIVPKEVLSDLSKIMTGGLEDMVEMYFSGQYLLFHYENTTVVTQLV DGEYFHVKQMLSTDYETKIMVNRKQLLEDIDRARIMARDNDKQPLILKIADDSLSLKIIS DLGRMDAEIPVKQEGKDLLIGFNPNFLMDALQNIEEEEVSLYFTIPRSPVFIRDKEENYI YMILPVNFNADQVE >gi|333758476|gb|AFIH01000001.1| GENE 96 95053 - 95232 67 59 aa, chain + ## HITS:1 COG:no KEGG:Closa_0004 NR:ns ## KEGG: Closa_0004 # Name: not_defined # Def: DNA replication and repair protein RecF # Organism: C.saccharolyticum # Pathway: Homologous recombination [PATH:csh03440] # 1 45 1 45 361 65 66.0 7e-10 MIIESIELQNYRNYESLKLSLGNKNNIFYGDNAQGKTNLLEAIFLRPVPSLFVFVRIEM >gi|333758476|gb|AFIH01000001.1| GENE 97 95390 - 95809 173 139 aa, chain + ## HITS:1 COG:CAC0004 KEGG:ns NR:ns ## COG: CAC0004 COG1195 # Protein_GI_number: 15893302 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair ATPase (RecF pathway) # Organism: Clostridium acetobutylicum # 1 138 114 256 363 94 40.0 4e-20 MVIFSPEDLSLIKDGPRERRRFIDLELCQLNKIYLYNLTRYNRVLLQRNKLLKDISFKPQ LEDSLSVWDEELVKYGQALIRLRREFIESLQEKLIRIHKNISGGREELILSYEENVKEEA FLESVLRARETEKNKKSVW >gi|333758476|gb|AFIH01000001.1| GENE 98 95803 - 96132 245 109 aa, chain + ## HITS:1 COG:BH0004 KEGG:ns NR:ns ## COG: BH0004 COG1195 # Protein_GI_number: 15612567 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair ATPase (RecF pathway) # Organism: Bacillus halodurans # 1 107 261 368 371 108 52.0 3e-24 MVGPHRDDLLFQINGEDIRKFGSQGQKRTAALSLKLAEIELVKEKIEDYPILLLDDVFSE LDKKRQNFLLDEISDVQSIITCTGLEDLIENRFPIDKLYYVEGGKIECP >gi|333758476|gb|AFIH01000001.1| GENE 99 96143 - 98101 2022 652 aa, chain + ## HITS:1 COG:CAC0006 KEGG:ns NR:ns ## COG: CAC0006 COG0187 # Protein_GI_number: 15893304 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Clostridium acetobutylicum # 20 652 8 637 637 774 60.0 0 MAIEREDQDLNEQFHASKEYGADQIQILEGLEAVRKRPGMYIGSTSVRGLHHLVYEIVDN SVDEALAGFCDNITVTIHKDNSITVEDDGRGIPVDIQKKAGKSALEVVFTVLHAGGKFGG SGYKVSGGLHGVGASVVNALSSFLDVTVCKDGKIYTMSFSKGKVIKEIECIGTCTEEEHG TKVHFLPDAEIFEESIYDFDTLKVRLRETAFLTKNLRIKLIDEREEEIREMTFHYEGGIK EFVTYLNKGKEALYPDVIYCEGEKEQILVEVAMQHNDSYTENIYTFVNNINTPEGGTHLT GFKNALTKTFNDYARQNKLLKDSEPNLSGEDIREGLTCIISVKIEDPQFEGQTKQKLGTS EAQVAVQGIVSEQLTYFLEQNPAVARVMCEKSIMAQRARAAARKARDLTRRKSALDGVGL PGKLADCSSKDAERCEIFIVEGDSALGPAKEGRNPETQAVLPLRGKVLNVQKARLDRIYA NEEIKGMITAFGTGINEDFDLSKLRYHKIIIMTDADVDGAHISTLMLTFIYNFMPDLIKE GHVYLAQPPLFNITKNKKHYYAYSDEEYQNILKEIGAEGADVSRFKGLGEMDTEELAETT MDPETRTLLRVNMEEDDKAELDITFTTLMGDQVEPRREFIEKNARYVKNLDV >gi|333758476|gb|AFIH01000001.1| GENE 100 98112 - 100658 2370 848 aa, chain + ## HITS:1 COG:CAC0007 KEGG:ns NR:ns ## COG: CAC0007 COG0188 # Protein_GI_number: 15893305 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Clostridium acetobutylicum # 8 840 6 829 830 844 52.0 0 MEPNIFDKVQEVDLKKTMENSYIDYAMSVIVSRAIPDVRDGLKPVQRRVLYALQSLGVTP DKKTKKCATIVGETMGKYHPHGDSSIYGSLVYMGQPWSMRYVLIDKQGNFGSEDGDSPAA MRYTEAKMSKMAAEMLSGINKNTVDFMPNFSNEYDEPTVLPARFPNLLVNGATGIAVGMS TNIPPHNLREVIAGVDKIIENRIAGRKTEIDELLPIVKGPDFPTGATILGKRDVEEAYRT GRGKVKMRAVCEIETMPNGKHRIIVKELPYLVYRSRVIEKIADLVKDKKIDGITYIHDAA GKNSNAKINIELRKDANPQVILNQLYKHTQLQDTFGVIMLCIVNGEPKILNLLQILEEFL GHQVNVVRRRTEYDLQKCEDRAHILEGLLKALDHIDEIVAMIRAAKNVDEAKQNLISRFS FSDVQAQAIVDMRLRALTGLERERLENEYNDLLAKIAYYKEILGNENKLLSVIQEELDAI AEKYGDDRKTQFSFDKDFQAEDFISDDDVVITSTSLGYIKRMSPEHFHQQNRGGKGIKGM QTIENDYIEDLFMTTNHHYVMFFTNQGRIFRIKGYEIPEASRTARGTALVNLLSLQENEK VTATLCLRDTNEEKYLILTTKKGIIKKTELSQFANVRKNGMIAITLNEGDQLIEAKLLSE DEEIFLVTKKGMAIEFNEKDVRATGRSSMGVRGIRLNAGDEVIGMQEASQGEHFLLVSEK GYGKLTDKSCFKAQARGGKGIRCYKITEKTGDIVGFKLCDKDREILLITTEGIMIRINLD KVSILGRNTSGVKLMDIDKDTDTVIASVAKVRETENEEDSEEGAASENTDLRAVEENQKE GESPEENS >gi|333758476|gb|AFIH01000001.1| GENE 101 106894 - 107976 1124 360 aa, chain + ## HITS:1 COG:Cgl1221 KEGG:ns NR:ns ## COG: Cgl1221 COG0205 # Protein_GI_number: 19552471 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphofructokinase # Organism: Corynebacterium glutamicum # 1 339 4 333 346 254 42.0 1e-67 MRVGILTSGGDCQALNATMRSVGKSLYNLFDDIEIYGFLDGYKGLIYDEYKKMEKSDFSG ILTQGGTILGTSRTPFKLIREPDANGLDKVEAMKHTYRKHRLDCLVVLGGNGSLKTANLL SEEGLNVVGCPKTIDNDLYGTDMTFGFYSAVQVATNAIDGIHTTAASHGRVFIVEIMGHK VGLLTLYAGLAGGADIILVPEIPYTIDAVCKKIAERHASGSRFSIIAIAEGAISKEDSCL SKKELKKKIAEERKKHPSVAYKLAKDIEERIGAEVRVTVPGHTQRGGQPVPYDRVFATRI GAEAARMIKKEKFGYMLALKNTEIVPVPLADIAGKLKMVDPNSGIVKEARMMGISFGDEE >gi|333758476|gb|AFIH01000001.1| GENE 102 108052 - 109632 1230 526 aa, chain + ## HITS:1 COG:CAC0125 KEGG:ns NR:ns ## COG: CAC0125 COG2812 # Protein_GI_number: 15893421 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, gamma/tau subunits # Organism: Clostridium acetobutylicum # 1 431 1 423 542 322 41.0 2e-87 MGYTALYRKWRSKDFDDIVGQDAITRSFKNQVKSGKVGHAYLFCGTRGTGKTSLAKILAR AVNCENPIDGNPCNQCKNCRAILSNTSINVYEMDAASNRNIDDVRLIREQIEYPPVDMRY KVYIIDEVHMFTEQANNAFLKTLEEPPEYVIFILATTEPNALPITILSRCQRYDFKRIAV ETIKQRLAMICKEEGIRIAEDALEYIARMGDGSMRDSVSLLDQCASYDFQEEISYEDALK VLGAVDTTVFSALVRALRAKNMQAVMENIATVLEQGKELTQYCSDLLQYFRNMMLAKSVQ NLQGLVDLSEENKLLLLEDAKEMPMEEILRGIRLLSELLQQFRYANQKRVLLETCLMKLA FPETEEKTDAIAQRLEELEEKLAGGIPFAPGGKPEDANVNNQSQFGSTEEAKIVKVPKAQ FEDYQKLKEKWILVCNYFSQPLKGILCNAAIFPGKDRHSMILSCEKDAERKILSERISIV EGELRERENMEYHFHISAGDKRERMTQYISDEELEKISMPIEITEE >gi|333758476|gb|AFIH01000001.1| GENE 103 109754 - 110095 446 113 aa, chain + ## HITS:1 COG:CAC0126 KEGG:ns NR:ns ## COG: CAC0126 COG0718 # Protein_GI_number: 15893422 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 15 111 13 109 112 82 47.0 3e-16 MAKHGGFAGGMPGMNMNNLMKQYQKMQKKLEETQEELAKKEYTGQAGGGAVQIVINGEKK VLSVKLDKDAVDPEDVETLEEMIALAVNQALQEIEKDSSQEMGKLTGGMGLGF >gi|333758476|gb|AFIH01000001.1| GENE 104 110095 - 110691 600 198 aa, chain + ## HITS:1 COG:CAC0127 KEGG:ns NR:ns ## COG: CAC0127 COG0353 # Protein_GI_number: 15893423 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Clostridium acetobutylicum # 1 195 1 195 198 219 49.0 2e-57 MEYFSKDMDNLVQELGRLPGIGQKSAQRLAYHIINGDKERAYALSESIKRARDSIRYCKS CCTLTDEEYCPICASSERNHAQIMVVENPRDMGAYERVGKYNGVYHVLHGAISPLLGIGP DDIRLKELMQRLQGDVEELIIATNSSLEGETTASYIVKLVKPMGIKLTRIASGVPVGGDI ENIDEITLLRALDGRVSL >gi|333758476|gb|AFIH01000001.1| GENE 105 110709 - 112541 1980 610 aa, chain + ## HITS:1 COG:no KEGG:Closa_0177 NR:ns ## KEGG: Closa_0177 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 271 1 273 765 229 51.0 3e-58 MDKYEFSIKAEQIKKMVGQGDYKTAMQIADTIDWNRVRNANLLSSIAEIYEKNGEYEEAK DILLLAFERAPVGKRFLYKLSELSLSSGSIEDAVEFYKEFLDVSPEDPRKFLLQYMILKA KGAMASQLVRPLEQFTATELEEQWLYELAKLYGEAGREEDCVRTCDKMILLFGMGKYVDK AMDLKLHYRPLREEETAVPSGEEVVENAVSSVVEEKPEMKKEEQDSTPQKEESPEEFFDT VENEPQEEPSEGEEKAEKEETKEEEPVQREVIPTEKPETASSAEEVKFTNYHMIIEAKTL DEAFKIAVEEIKYFHKEYHLDFKVAKIDADKLNEKGFAVFADKLKERDLIIVGAGRLKYS VLDEIEQHILHPEDDSSVILVDEVDHFDRLAEDRPKFLTYFDIVSNHEEEEENLLEDVDL DGETEEQSSDAMKKDISSEDEESYPVEADEEDEYLDEEEQEYVPHKPSIFERPARPYTEV LEEEAKKEGSEDEETLDGDEEFTEPEVEERRQEGPSSASMDIEEFAQYAIDYAKSIDCSI TDKGITALYERIQLMEEDGIILNKESARDLIEETADQAEKPSIGKKIGSLFRPKYDKDDK LILREEHFMG >gi|333758476|gb|AFIH01000001.1| GENE 106 112724 - 113215 339 163 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227874526|ref|ZP_03992692.1| ## NR: gi|227874526|ref|ZP_03992692.1| conserved hypothetical protein [Oribacterium sinus F0268] conserved hypothetical protein [Oribacterium sinus F0268] # 27 162 83 221 223 92 46.0 8e-18 MLRSIFSAIWSFLLPAKDKMLSVPKSLSDFLPSQPEPTNPPLFGGMYEAVGKWQDQLAQY IITFINGILFFLLLYLLFRLLMKVLQQVLEYLFKLPGLNFGNRMLGLCLGAVEWVFFIWI ILILFSFLPESAVSLWILDGFSREGSIPYLIKENNWIAQIFLG >gi|333758476|gb|AFIH01000001.1| GENE 107 113497 - 114468 664 323 aa, chain + ## HITS:1 COG:no KEGG:SEQ_0524 NR:ns ## KEGG: SEQ_0524 # Name: not_defined # Def: membrane protein # Organism: S.equi_equi # Pathway: not_defined # 13 311 14 302 316 162 33.0 2e-38 MAEEIRESREEELERIRQLEASPEYQEKLRILREKMKINIRWKMYKIALVLGTVMLFAMF KFVGFVIAAVLGFIYVYPVYKRKQELFREKKENNEVLYVEKFLSPIVKEIFPMGEMKVTP DFLLDPVKKVCPSSTNYRGNTELSLHDSSELSVMNLYAYHVVESTDSKGRTSRKEVTDFY GQVFRMQFPKSFAGHIRVIPTERTAILKREVQDYPGKQKNELKIDTEDIRHNEHYNIFCT DEFMARRFLNPTVLDWFDKNISESQTAIYIEDSTMYISRYTGYQLFPVPGTVEAIDQLSL VEEYKKLRAEIDLIESFTEIFKA >gi|333758476|gb|AFIH01000001.1| GENE 108 114563 - 115102 561 179 aa, chain + ## HITS:1 COG:SPy0330 KEGG:ns NR:ns ## COG: SPy0330 COG1704 # Protein_GI_number: 15674491 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pyogenes M1 GAS # 1 163 4 170 185 83 28.0 2e-16 MILIPIILVVIFLWFIGESNKLNRYVVLIEESKKTGDITLVKRYDTISEMLKVAKAYAKH EEKVFTELVTMRTGGTVQDTNRVIANQNDVLSQIHAVAENYPDLLSSQQFLNLQKEIASE NEDLAAAKRIVNSNIRVFNQAVVSFPTSIVAGIKGMRKFDFLEEELQGKRDLNDLNYDI >gi|333758476|gb|AFIH01000001.1| GENE 109 115345 - 116679 1507 444 aa, chain + ## HITS:1 COG:lin0569 KEGG:ns NR:ns ## COG: lin0569 COG0334 # Protein_GI_number: 16799644 # Func_class: E Amino acid transport and metabolism # Function: Glutamate dehydrogenase/leucine dehydrogenase # Organism: Listeria innocua # 3 444 17 458 458 550 62.0 1e-156 MSYVSEVYQELEKKHPYEAEFLEAAKRILESLSPIVEANEEVYRKNALLERFVEPERIIS FRVPWTDDQGKNHVNIGYRVQFNSAIGPYKGGLRFHPTVNQAILKFLGMEQILKNSLTGL PIGGGKGGADFDPKGKSDAEVMRFCQSFMTELYKYIGADEDVPAGDIGVGGREVAFMYGQ YKRITNLYEGVLTGKGRSFGGSLARPEATGYGLIYIVEEMLKAEGKELKGKVLAVSGSGN VAQYAIQKAESLGAKVVTCSDSSGYVYDPEGIKLDVLFDIKQVKRGRISEYAERVPGASF HAGERPWGVKCDVALPCATQNELNGEEAKTLIANGCFCVAEGANMPSDEHAVDVFLEKKI LYMPGKAANAGGVAVSALEMSQNSQRLSWSFEEVDEKLKGIMQNIYKNVSGAAKKYGYEG NFVVGANVAGFEKVAEAMLSQGMV >gi|333758476|gb|AFIH01000001.1| GENE 110 116920 - 117498 357 192 aa, chain + ## HITS:1 COG:no KEGG:Closa_4282 NR:ns ## KEGG: Closa_4282 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 10 163 1 155 295 122 43.0 1e-26 MEAEIEGDTMHKFLRSIGFSALQNDREAEFYLDRAIHEKYRTAFISDNSGRVIEQYQLPV ASSMGITVVGHRDGGEFVRDYYFPYMQSYEGINTEEAGIERHTEKETYAGVMEDFSSGIT LIFYLCNSLEARQLKRMGVPLKPKQAFLTGMAVEGKIILPIEKQNEDEDVFQNKKREQKN FLMRQRPEMRTP >gi|333758476|gb|AFIH01000001.1| GENE 111 117528 - 117830 301 100 aa, chain + ## HITS:1 COG:no KEGG:Closa_4282 NR:ns ## KEGG: Closa_4282 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 2 97 197 292 295 118 56.0 6e-26 MSEINRRIEEEDLYSLVESSFMPTGIECDQYSILGEIISLRMKSNVYTHENVLDLKLQCN DAIFHVCMNEKDLLGVPAIGRRFKGTIWMQGEMEFLDDHQ >gi|333758476|gb|AFIH01000001.1| GENE 112 117834 - 118598 840 254 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227874237|ref|ZP_03992436.1| possible ribosomal protein S4e [Oribacterium sinus F0268] # 1 253 1 253 254 328 64 8e-88 MKEKEDVLSHIKDLWHMAEERGYATTSAFLSEEERAKFLQSIRGERGASYFLLPENGERQ LFVFYPSFMTEEECRSSLSGENAPFSILEIRGKQKKFAEKLSHRDVLGAVMNLGISREQV GDILFQEDVSYLFLLRKMKDYVAENLSTIRHTAVQCKEVVEMEGMERREVEERIFVPSER LDAIVSAVFHLSRGNAQEYFQKELVYRDGITVKGSSSLKGGEKISVRGLGKFRYIGVEKN TKKGRIVAVILRYI >gi|333758476|gb|AFIH01000001.1| GENE 113 118706 - 119989 509 427 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 [Roseobacter sp. AzwK-3b] # 6 421 3 423 425 200 35 2e-49 MEEYKIEERKAVLVGVQFPDNKDFSLDMEELAGLCEALSIRPVTSLSQCLAREDSASFIG SGKVEEVREAVLFHEANLVIFQNPLSPSQLHNLTKALPCEVLDRTQLILQIFSERAKTKE AKMQVKYATLQYMLPRLVGLRENLSRQGGASGSLSNRGSGEKQIELDKRKIQEEMAILRR ELKKQEEVRKVKRQKRDKSAIPRVALVGYTNAGKSSLMNALLTISKENQAEGVEEKDMLF ATLDTTIRRIVQEKGEEFLLADTVGFTRSLPDKLLDAFHSTLEEAVEADLILQVVDYSDE NYQKHMDATLDTLKKLEAGHIPMLYVMNKCDKVLPLEELPKLRGEKLYISVKEKLGLKEL VEKISQVLSAGLKQVNILLPYTASAYENRIRSEGKLLSLSYEEDGILISAKVPAALEAQL KNYSISE >gi|333758476|gb|AFIH01000001.1| GENE 114 119976 - 120737 668 253 aa, chain - ## HITS:1 COG:no KEGG:Closa_4227 NR:ns ## KEGG: Closa_4227 # Name: not_defined # Def: integral membrane protein TIGR01906 # Organism: C.saccharolyticum # Pathway: not_defined # 1 236 1 226 236 106 31.0 1e-21 MKKYLRFSYPILAVLFTLMLYFILFVSAFELACYNNSSYYRKEFKKFKVEESLKEYRGEE IPLSDLENVMRETLRYLRGDRENLFIPVSVNGESTEFYQEDEASHMADVRVLFTTSLTLR TMFILSCLAILFFLLILEHGRAFYILGKGFLFTSIGLLSVLLLLSLYAVVNFNTAFTEFH HIFFSQGNWEFDPTLSRMIDIMPEEFFADTALRILMHYLFLLLFPFLFSFFFVKRAKGWG YPEEDKKEFYGRI >gi|333758476|gb|AFIH01000001.1| GENE 115 120842 - 121192 332 116 aa, chain + ## HITS:1 COG:no KEGG:Selsp_2135 NR:ns ## KEGG: Selsp_2135 # Name: not_defined # Def: hypothetical protein # Organism: S.sputigena # Pathway: not_defined # 7 100 4 97 107 110 55.0 2e-23 MNSEQIEKKRQGEIRLISEMISLYCKKKHGSSGALCEECQALSDYAKSRIMRCPFMEKKS FCSYCPVHCYSPEMREKIREVMRVSGPSMLLHHPLLSISHAVEGMKNKKAGKKPDA >gi|333758476|gb|AFIH01000001.1| GENE 116 121254 - 123128 1665 624 aa, chain + ## HITS:1 COG:HI0663m KEGG:ns NR:ns ## COG: HI0663m COG4988 # Protein_GI_number: 16273636 # Func_class: C Energy production and conversion; O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components # Organism: Haemophilus influenzae # 1 574 2 577 581 508 47.0 1e-143 MIKMRLIRLLEGAGKYIVQQIVWQWISLLAQVVIVYNIAHLLENAWQQKLSTEGIALTMG IVLLGLGFRFLCDRLYTKASFHASADVKRILRNKIYEKMLSLGPSYRESVNSAEIVQMAG EGVEQLETYFGRYLSQFFYSLLAPITLFFILSRISVQTALLLLLAVPLIPIVIMLVMIVA KKLLSNYFAIYYGLGDSFLEKLQGMTTLKIYQADQAATEDMDREAERFRKITMKVLSMQL NSTSVMDIIAYGGAAVGIISALGQFSKGAISLSGVLMITLLAAEFFLPMRLLGSFFHIGM NGMKASDRIFAFLDLPEAEDGKAVLEEKEIRISMEKLCFSYEESREILRDIELEIPACSF VSLVGLSGSGKSTIAGILMGKNKGYKGSVKLNGRELTEFSSRSILDKMTMIGHDSWIFKG TVRENLLLGNPSATEEEMREALKKVNLLSFVETQGGLAMQLHSNGTNISGGQKQRLSLAR ALLHDTPVYIFDEATSNIDAESEEMIMEVIHELAKSRTILLISHRLANVVGSDCIFMLEN SRVAEAGKHEELLKKGGSYSRLFREQSELERYSEKHKESSAGKHTESFVEIQRDTCMEEQ GHMEDLQDQRGEREDIKEGGEKHE >gi|333758476|gb|AFIH01000001.1| GENE 117 123121 - 124842 213 573 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 375 572 16 217 245 86 33 4e-15 MNKRRSDLAIMRKLIVLIKPLAGVMLTGIILGVLGFLCAIFLTILGGYGILKGISELTAL HGLFGASFSMPGDFFSFATGSWQKLFTVILLFAAARGILHYGEQYCNHYIAFRILAIIRH KVFAILRKLCPAKLEGKEKGNLISVITSDIELLEVFFAHTVSPIAIAFLTSLIMLLFIGK QHILAGTIALAAYLTVGVLLPIWNGKRSAEAGMALRSEMGELNNFVLDSLYGLDEIQQYH VGEKQAMEMDERSKRLSAFQRNLSSFEGSQRAVTNLAIQLFSWGMFFTMLFLYQNHAVRF SALLLSTLAMMSSFGPVVALSSLSNTLNQTLASGERVLSLLEEEPAVEEVSNGEEIPFNG ANVEKLTFSYQDEIILKQVSVDIPKGKVLGIHGVSGSGKSTLLKLLMRFWDTKEGEILFS GKNVKEINTDCLRKMTSYVTQDTILFHDTIGKNIAVAKLSATQEEIENAAKKASIHDFIM SLPKGYETEVGELGDSLSDGEKQRIGLARAFLHDAELLLLDEPTSNLDVLNEGIILQSLE KEKEGKTVVLVSHRQSTMSLADRIYEMEKGRVS >gi|333758476|gb|AFIH01000001.1| GENE 118 124857 - 125339 441 160 aa, chain + ## HITS:1 COG:lin0783 KEGG:ns NR:ns ## COG: lin0783 COG2606 # Protein_GI_number: 16799857 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 6 155 4 153 158 166 54.0 2e-41 MGKETKTNACRILDRAKISYEEREYPVDENDLSGVHVAEVLGVPPESMYKTLVLKGDKTG YLVILIPVAEELDLKKCAKLSGNKKVEMLPMKDLLGITGYIRGGCSPVGMKKQFPTFVQE EARERESFIISAGRRGAQLVLSPTELVSFLRGEFADCIQK >gi|333758476|gb|AFIH01000001.1| GENE 119 125535 - 125765 197 76 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227872110|ref|ZP_03990483.1| ## NR: gi|227872110|ref|ZP_03990483.1| ECF subfamily RNA polymerase sigma-24 factor [Oribacterium sinus F0268] ECF subfamily RNA polymerase sigma-24 factor [Oribacterium sinus F0268] # 9 61 109 161 190 85 86.0 2e-15 MQKTQIPTEVEEKVDEKYSFSFVENLEHRLLLESAMQILEEEERQILFLHAVAGWKNREI SASNGAVRKADAERDD >gi|333758476|gb|AFIH01000001.1| GENE 120 126085 - 126366 385 93 aa, chain - ## HITS:1 COG:no KEGG:Ethha_1384 NR:ns ## KEGG: Ethha_1384 # Name: not_defined # Def: glutaredoxin # Organism: E.harbinense # Pathway: not_defined # 1 93 1 87 87 66 39.0 4e-10 MSKVKFFYVNGCPYCAQARKAREELISENPEYGKVEFEEIDEGLRPEIANQYDYWATPAM FVKEEKIYEAHKGESYDEAKENVKRVLEAALKA >gi|333758476|gb|AFIH01000001.1| GENE 121 126695 - 129271 2733 858 aa, chain + ## HITS:1 COG:CAC0120 KEGG:ns NR:ns ## COG: CAC0120 COG0840 # Protein_GI_number: 15893416 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Clostridium acetobutylicum # 352 724 190 515 555 210 39.0 8e-54 MKEQKISRKNSGKTMQLSTRMSLTLGLFSTFVLVVFGYTMIHLSKQYISKSIDGNMTDKA YMAFNDVDNIIVKADILAKSIRDGISSTYEGAGSGESEVWNIVTTDGTAVRTEPTELGTF RSRVRNVPVSKSQYVVEGSLLNSLFSAINSNDDVSGVGVYFAPDGFIKGASDYSLYITKE GAKERKLETTDASYQESENYKTLQETKTKVIRTIPENADQHIFSVEEPILVKDEFKGFVK VDITLDSFEILHQEDERFPSLSVSLADNNGIMLYSMQKENIGKEFKDTVSEKSYEDISKG MERARTFTLMTGGGKEGRVRRFLTPIEIGGNDWWIMVDLSGQEYDKARNELIVISTILTI LGVILLASVTHILIKRALKPLKKISEAGLLVSQGNFDVSISYQKKDEIGDLSESMIEIMD RIRSIIADLQEKLAELAKGNYRVDMSDEKYYQGAYYPLLNSLREISKDLSNTMRGIVNSA NQVSLGAEQVSNASQTLSQGATEQASSIEELSATMDDISGKISNTAKVSEEMAKLSNESE KAVLLSNQKMSDMSKAMQDITEKSNEISKIIKTIDDIAFQTNILSLNAAIEAARAGAAGK GFAVVADEVGNLAQRSAKAAQNTSDLIEETIDAVSKGAKISEETAASLEIVSAQSKKINT IITEISASSEEQAKGVKQVSLGIEQISSVVQSNSATAEESAASAEELYGQANLLNDLMRN FKLQDVKVEKEVKEEEGSVSAEAPEEIEEIRVASKEDPKPVSALKDKKKEVKPVSSVKET KEEAVPEAPVKEEKKPLPKPVAKKAPKKKEEKQEDFDLNSVEEGIDLMTIPEPKTPPKTY EDMENQNWTVDSFGNDKY >gi|333758476|gb|AFIH01000001.1| GENE 122 129468 - 130673 908 401 aa, chain + ## HITS:1 COG:CAC2970 KEGG:ns NR:ns ## COG: CAC2970 COG1168 # Protein_GI_number: 15896223 # Func_class: E Amino acid transport and metabolism # Function: Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities # Organism: Clostridium acetobutylicum # 2 395 1 377 384 235 34.0 1e-61 MLFNFTDIIDRHGKDATAIDGIGKMPAAPAAPKEGFDAIPMWVADMNFAVPPCIQRAMTD RIMHPCFGYFQPSEAYYDGIIEWQKTQNAVEGLKPENISYENGVLGGLLSALNIFCSRGD KVLVHSPTYIGFTKSLINNGYTIVSSPLYRDEEGIWRIDFSDMEKKLREEKIHASIFCSP HNPSGRVWEKWELEKLMALYEKYDVQVVSDEIWSDIIMPGYRHIPTQSVSDYAKMHTIAL YAPSKTFNLAGLVGAYHIGYNKTLQDRMEKESSLSHYNTMNVLSMHALVGAYSEEGRAWL KELLAVLSENRDYACDFMEKNLPDLSVMKAQGTYMLFIDCGKYLEKKNISLEDLEKRMWD CGVGVQDGKMFHGQTHIRMNLALPKSRVEEAFRRLKEYVFV >gi|333758476|gb|AFIH01000001.1| GENE 123 130762 - 131229 226 155 aa, chain + ## HITS:1 COG:CAC2242 KEGG:ns NR:ns ## COG: CAC2242 COG0640 # Protein_GI_number: 15895510 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Clostridium acetobutylicum # 68 155 34 121 122 92 57.0 4e-19 MQCSVFINKKTEQQGKKRKREKEKRRTGGRQSTKIKDWKGSEQEGTLKLQEAEVPRAALT DTISEDILCDLAELFKVFGDSSRIKILYDLFSGEKNVTEICRDLEMNQSAVSHQLKILRT AKLVQGRREGKSIVYALADEHVKMIIAMGIEHTEE >gi|333758476|gb|AFIH01000001.1| GENE 124 131242 - 131460 306 72 aa, chain + ## HITS:1 COG:no KEGG:bpr_I1530 NR:ns ## KEGG: bpr_I1530 # Name: not_defined # Def: heavy metal associated domain-containing protein # Organism: B.proteoclasticus # Pathway: not_defined # 1 69 1 69 71 73 57.0 3e-12 MKKKFECEIDCANCAAKMQDAINKIEGVQSVKVNFMMQKFTLEAEDARFEEILTEAIRIG KTIEPDFKVLGV >gi|333758476|gb|AFIH01000001.1| GENE 125 131534 - 133480 1988 648 aa, chain + ## HITS:1 COG:BS_yvgW KEGG:ns NR:ns ## COG: BS_yvgW COG2217 # Protein_GI_number: 16080402 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Bacillus subtilis # 44 647 119 698 702 557 50.0 1e-158 MSEKLKKERSRVGIALALFLGLMIIEKMKLISILNEHPIYFLPLYLLPYFISGYDVVREC ILGIKNRRPFDEALLMTIATVGAFFAGEFAEAVAVMVFYQVGELFQSYAVGQSRASIKEL MNIVPEYANVERADGSVETIDPDEVEIGDILLIKAGEKVPVDGIVRSGESMINTAALTGE SVPRSVFPGENIISGCINGEGLLRVEATKCFEDSTVSKILELVEEASEKKSKTENFITRF ARFYTPIVVFSALALAILPTLIQFFGVTTGALPKEIWQAHPPIIWLYRACTFLVVSCPCA LVISVPLSFFGGIGAASREGILVKGSNYLELISQLSVLVTDKTGTLTKGNFAVEKLCPAE GVSEEELLFAAASAENGSTHPIAKSILLAYQEGDFVRRELLIPKETENRSGKGLIAKVED SQILVGSGRLMEEFRISYSEEEAESATVCHVARDGAYLGKITIADEIKESSREAILKMKM EGVKEVVMLTGDSKPVAEEVGRALGVDRVYSELLPAGKVEKVEELLKSLEKNGKQEGYLA FVGDGINDAPVLSRSDVGIAMGGMGSDAAIEAADIVIMDDDLVKIPRVISIGRRTVRIAT ENIVFALGIKILVLLLSAFGLANMWAAVFADVGVTVICIVNAMRLLKR >gi|333758476|gb|AFIH01000001.1| GENE 126 133589 - 134206 445 205 aa, chain + ## HITS:1 COG:no KEGG:Closa_2635 NR:ns ## KEGG: Closa_2635 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 202 1 196 198 147 39.0 3e-34 MEKKLDFFYIGDSYGGNQDWCLDHMMQLGGCAAITACDSTLYFALHHGKTSLYKGDLEKP DQDEYLYFTEEMKEYLHPRWCGIDKPEIYVEGFTRFLEDKGEKVTMTILPGTADEGEAEE RIKEQIEKDLPVPILILNHENPAMEDYVWHWFLLIGYRYDEENALAEEGRFQVQTLTYSE AKWVDFRSLWNTGREAKGGIILYSL >gi|333758476|gb|AFIH01000001.1| GENE 127 134273 - 135157 766 294 aa, chain - ## HITS:1 COG:CAC0023 KEGG:ns NR:ns ## COG: CAC0023 COG0583 # Protein_GI_number: 15893321 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Clostridium acetobutylicum # 1 293 1 293 299 154 30.0 3e-37 MEIRQLHSFIKIVELQSFSKAAEALGYTQAAVTIQIRQLELEFNTRFFDRVGRHVELTPP GKKFLLYANEILRKVDDVHTILGTTIVRDHKLRIGTLESLLNFKLPQVITYFYRHYPSIS LEIRSGTPKELNDMLDHNQIDLAYYIDQKVYGQNWEKTLEEPESVIFVAAKDVDLPEKKE YLLPELLNLPFFLTERDSNYRFALEQELASQHLSIRPFFETRNTDVIIELIKENKAISFL PYYAVQKDLEEGSLRQLEVKDFHLTMYRQLFYHKDKWMTEEMKKFISLSDQLML >gi|333758476|gb|AFIH01000001.1| GENE 128 135528 - 136952 731 474 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 30 445 19 432 447 286 37 4e-75 MKEQMKTMKKFGEEAIFDARSLGGWRFFVLGFQHLFAMFGATVLVPLLTGLSISSTLLFA GLGTLLFHFISKKKVPAFLGSSFAFLAGYMSIAPNKEPELLLYACFGVALAGLMYLVLAF AFRIFGAGKVMRFFPPVVTGPIIIAIGLNLSKSAVENCSSNWGLALTAIVVVIFCNIFGK GMVKIIPILLGVVVSYLFAAVLGYINFEPVASASWFGFPVQYERTVFSLFTSGNLDPALL FSSCLTIIPISFATMMEHIGDISAISSTVGINYMKDPGLHRTLTGDGLATTMASLFGAPA NTTYGENTGVLSLTKVYDPRVIRLAAVFAVFLSFCPKFSAVIEVMPSAIIGGISLVLYGM ISAVGVRNVVETKVDFSKSRNIIVAAMILVLSIGINYSSAGALVFHVFGVQIAFSGLATG SLVGILLNAILPDKDYKFEEDEPNDTGVDLQISQGKSLLWELAEKAREEEEKKQ >gi|333758476|gb|AFIH01000001.1| GENE 129 136959 - 137150 64 63 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKGRASPMRLHQAARSDERWGNCSFGKNKKKNRKKLQKVPYIGMKAYVGDSLLFHMSKVR YVR >gi|333758476|gb|AFIH01000001.1| GENE 130 137065 - 137646 290 193 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227874205|ref|ZP_03992407.1| ## NR: gi|227874205|ref|ZP_03992407.1| hypothetical protein HMPREF6123_2346 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_2346 [Oribacterium sinus F0268] # 11 193 21 208 213 68 34.0 2e-10 MQEYEQLEKYDCIVVGGGASGLAAISAMADLGITNTLLLEKNAEAGGSLLTDSEPLSLSG KSFSGKSLLTQFLRLMEIYEVKSAFHRELISVSLNERSQVSPAPLIQNETADGEKGFRPF FTLSVKNTMSQKEELYCCNYLILAFSNSKAFSLHDAGIPEDRVKIIEGKSLSDALTSGGK VGREMGELLLRKK >gi|333758476|gb|AFIH01000001.1| GENE 131 137661 - 137903 417 80 aa, chain - ## HITS:1 COG:no KEGG:Closa_1693 NR:ns ## KEGG: Closa_1693 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 74 1 75 95 74 52.0 1e-12 MKIENVNNVEGLFSLLNGLKGRVELVSPEGDRINLKSKLSQMLMMSQMLDKAYIKELELI VHEPEDMKKVVEFMMGDANN >gi|333758476|gb|AFIH01000001.1| GENE 132 138051 - 138779 669 242 aa, chain + ## HITS:1 COG:aq_1718 KEGG:ns NR:ns ## COG: aq_1718 COG0424 # Protein_GI_number: 15606799 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Nucleotide-binding protein implicated in inhibition of septum formation # Organism: Aquifex aeolicus # 57 238 2 182 190 133 42.0 4e-31 MTAREKAAKKGKEVDKEMDMEMDKEELEELEALLRKKKEKESEEEWKKPSLQESFPKLVL ASGSPRRIELLKLLGFSPTVYPSGADESSTEKDPALLTQRLAFLKAEEVQRHFDGETLLI AADTVVFDGEKILGKPKTEEDAYAMLSGLSGKVNWVYTGVCILYGEKKMGFCEKTTVYLS KMSDREIREYIASGDPMDKAGAYGVQGPFARFVKGIEGDFCNAIGLPIARLYQALKRFRE EL >gi|333758476|gb|AFIH01000001.1| GENE 133 138897 - 140270 1384 457 aa, chain + ## HITS:1 COG:BH1128 KEGG:ns NR:ns ## COG: BH1128 COG0733 # Protein_GI_number: 15613691 # Func_class: R General function prediction only # Function: Na+-dependent transporters of the SNF family # Organism: Bacillus halodurans # 1 402 3 404 453 243 38.0 7e-64 MDEKKKRSKFSSKLGFVLSAAGSAVGLGNIWRFPYLAARYGGGIFLLIYLILVLTFGYTM IIAESAIGRMTRKSPVGAYAHFGKDWMFRFGGWINAIIPILIVPYYSVIGGWVLKYLFAY LQGEETAVATSEYFGGFIGNGVQAEFWFILFTFMVMLIIFMGVENGIEKVSTFMMPVLVL LAVVLSIYAVTRPGAFSGVKYFLIPNVKNFSWMTVVAAMGQMFYSLSIAMGILVTFGSYM KSDHSIEESTGNVEIFDTAIAILAGLMIIPAVFAFSGGDPKVLKAGPSLMFITMPKIFAS MGFGRIVGFLFFILVFFAALTSAIALAESAVSTFQDELKWSRKRATLVLAIIMVSLGTLS ALGYGPLSGITLIKGMQFLDFFDFLTNSVMMPIAAMATCLLVVRVITVKGIAEEVEKNGA PFKRKAVFNFMIKYLCPFFVAIILFSSVASVLGWIKF >gi|333758476|gb|AFIH01000001.1| GENE 134 140342 - 141136 194 264 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 5 246 1 240 242 79 28 7e-13 MELGLKGKVAVITGGSKGIGYATAKEFLKEGASVAICARNQKEIEEAAETLGKFGPVYAE TVDVSKGDEIYGFAQHVFEHFGRLDVWVNNVGTTGYKKADEYDEEEINLMVDTCFKSVVY GCQAAFRYMKNTGGAIVNVSSLAARCSSAGRSTLYGPLKSAINNLTNTFAGEYCANHIRV CCIMPGFTATPLAKAAISEEELQKNAMGTLLRRMAEPEEIAKPIVFLASDAASYMTATTI EVSGGRSMTLNPSFAYERLKEDAE >gi|333758476|gb|AFIH01000001.1| GENE 135 141273 - 141686 446 137 aa, chain - ## HITS:1 COG:SP1851 KEGG:ns NR:ns ## COG: SP1851 COG2050 # Protein_GI_number: 15901679 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized protein, possibly involved in aromatic compounds catabolism # Organism: Streptococcus pneumoniae TIGR4 # 16 135 5 125 134 92 36.0 2e-19 MSKMMNEKIMEGIRAHMQDLSGFDRIELLEIEPGHSLFKIEITEKMLNHYGAVHGGALYT LCDMVSGMTAYAYGVTNVTLSGNINYVRPAGVGTLYIECNSLHKGRTTVVQDVTVRDKEE KLLCTARMTMYITGEVE >gi|333758476|gb|AFIH01000001.1| GENE 136 141787 - 143424 1949 545 aa, chain + ## HITS:1 COG:BS_ykpA KEGG:ns NR:ns ## COG: BS_ykpA COG0488 # Protein_GI_number: 16078507 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Bacillus subtilis # 1 539 1 540 540 744 66.0 0 MIAASNVTYRVGKKALFEDVNIKFTEGNCYGVIGANGAGKSTLLKILSGALEPTSGEIIL TPGQRLSVLEQDQFKYDNYSVLDTVIMGNKRLYEVMKEKDALYAKPDFSDEDGIRAAELE GEFAQMDGWNAEADAETMLNGLGIETELHHKMMNELKGSEKVKVLLAKALFGNPDILLLD EPTNHLDLVSIEWLEDFLINFENTVIVVSHDRYFLNKVCTNIADIDYGKITLFAGNYDFW FESSQLIVRQQKEANRKKEEKIKELQEFIQRFSANASKSKQATSRKRALEKIELDDIKPS SRQYPYIQFKPNREIGNDVLEVNNLTKTINGVKVLDNISFILNRTDKVALVGPNELAKTV LMQILAGEMEPDSGDYKWGLTTSQSYFPKDNTKEFDSEDTIVEWLTQYSPDKDTQFVRGY LGRMLFKGDDGVKKVNVLSGGEKVRCMLSKMMISGSNVLILDEPTDHLDMEAISALNDGL KNFPGVIIFASRDHQVVETTANRIMEIIDGKLIDKLTTYDEYLASDEDIKKRFTYTVSED DAGDN >gi|333758476|gb|AFIH01000001.1| GENE 137 143444 - 143686 223 80 aa, chain + ## HITS:1 COG:no KEGG:CD3156B NR:ns ## KEGG: CD3156B # Name: not_defined # Def: hypothetical protein # Organism: C.difficile # Pathway: not_defined # 12 78 8 74 75 74 53.0 1e-12 MKEALEKKNTNRELEFTIFCIESLAEALHQDGATVYQALSREKNLIQNYIIPEYEVLHTQ GKDYIVEELLRVMKDWGISL >gi|333758476|gb|AFIH01000001.1| GENE 138 143683 - 143799 57 38 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MILYHGSYIAISKPDFLHSRPYVDFGKGFYTTPFREQL >gi|333758476|gb|AFIH01000001.1| GENE 139 143747 - 143983 141 78 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0424_0696 NR:ns ## KEGG: HMPREF0424_0696 # Name: not_defined # Def: hypothetical protein # Organism: G.vaginalis # Pathway: not_defined # 15 78 93 157 164 75 55.0 6e-13 MWILEKGFIQRRSESSYDLVLGGIANDKVFNTVELYLDHLIDEEEAIKRLRFEKPNLQYC FRTEKALSALHFDRSEEV >gi|333758476|gb|AFIH01000001.1| GENE 140 143980 - 144108 119 42 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227873072|ref|ZP_03991366.1| ## NR: gi|227873072|ref|ZP_03991366.1| conserved hypothetical protein [Oribacterium sinus F0268] conserved hypothetical protein [Oribacterium sinus F0268] # 1 34 6 39 77 66 94.0 6e-10 MTAHPILLQKKYARIIAGFAEKEKMSLENALDFFINLSCINL >gi|333758476|gb|AFIH01000001.1| GENE 141 144212 - 144733 399 173 aa, chain - ## HITS:1 COG:FN0809 KEGG:ns NR:ns ## COG: FN0809 COG0219 # Protein_GI_number: 19704144 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted rRNA methylase (SpoU class) # Organism: Fusobacterium nucleatum # 1 155 1 148 150 183 60.0 2e-46 MNIVLHEPEIPFNTGAIGRTCVATNTRLHLIKPYGFILNSKNIKKAGMDYWEHLQLKEHL SYEDFLKDIAEEQNSISTPKIWYATTKAKRTYTEVSFSENDYIMFGKESAGIPEEILVEN EEQCIRIPMLEEARSLNLSNSVAIILYEALRQQDFKSLKKEGALHRLHWKEEQ >gi|333758476|gb|AFIH01000001.1| GENE 142 144739 - 145029 350 96 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227873070|ref|ZP_03991364.1| ## NR: gi|227873070|ref|ZP_03991364.1| hypothetical protein HMPREF6123_1303 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_1303 [Oribacterium sinus F0268] # 6 77 3 66 102 67 50.0 3e-10 MNDFEDCNDCRNYAYDEDEDEAGCMANFDEDDLTRLQDTDSRAHCPYWCRSDSIKAKQSG NEYDTVKYQAIGHLSIEEIAKKAREKLAKRKEAKNG >gi|333758476|gb|AFIH01000001.1| GENE 143 145032 - 145754 187 240 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229845805|ref|ZP_04465917.1| 50S ribosomal protein L31 [Haemophilus influenzae 7P49H1] # 26 232 22 231 378 76 26 4e-12 MFIAKESKKKREARVREIMERLDAHYGDHPMIFLQAKNAWQLLFATILSAQCTDARVNMV TEKLFQKYKSLEDFASCDLKELEEDIHSTGFYHNKAKNIKACAAALVEEYGGEVPKDIDS LTALPGVGRKTGNLILGNIFHIPSIVVDTHVKRISNRLGLADSSDPTKTEFQLMEVLPEE FWIRWNTHIIALGRTLCTSQKPKCELCYLNDLCPSVKGDPETWRSPAERKKEKTADGKGK >gi|333758476|gb|AFIH01000001.1| GENE 144 145852 - 146352 498 166 aa, chain - ## HITS:1 COG:FN1902 KEGG:ns NR:ns ## COG: FN1902 COG2131 # Protein_GI_number: 19705207 # Func_class: F Nucleotide transport and metabolism # Function: Deoxycytidylate deaminase # Organism: Fusobacterium nucleatum # 7 156 15 160 174 188 62.0 4e-48 MSESEKRSDYISWDEYFMGIAELSALRSKDPSTQVGACIVSADNKILSMGYNGFPKGCSD DIFPWTKIRAEHDPYNAKYVYVTHAELNAILNYRGGSLDGAKIYVNLFPCNECAKAIIQS GIKTLVYREDKYADTPSVRASKRMLDAAGVRYYQYQATGRNISLDL >gi|333758476|gb|AFIH01000001.1| GENE 145 146345 - 146491 111 48 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQEKNKKYIPRLVCKTKSKNGRIMNNSFLTDTHYPKNKKEKKVRNRDE >gi|333758476|gb|AFIH01000001.1| GENE 146 146856 - 147494 560 212 aa, chain + ## HITS:1 COG:CAC2841 KEGG:ns NR:ns ## COG: CAC2841 COG3601 # Protein_GI_number: 15896096 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 18 209 1 194 209 131 36.0 9e-31 MSKIGKTELSGTMSGGSMNRERIGNLAITGILGAIAYILMWLEFPIPIMPPFIKFDFSDF PALLAAFSMGPIAGIMVELIKNVLHSFSSGSFGVGELSNFILGASFTAVAGFVYQKNKTK KAAVLGAVLGALVMALVSYPSNLFVVYPFYYNFMPKETVLSLYQVILPSVQSMEQALLIF NLPFTFVKGLIDVLLCLLLYKGLSPVLHQFRR >gi|333758476|gb|AFIH01000001.1| GENE 147 147625 - 149148 1165 507 aa, chain + ## HITS:1 COG:no KEGG:Closa_2429 NR:ns ## KEGG: Closa_2429 # Name: not_defined # Def: polysaccharide deacetylase # Organism: C.saccharolyticum # Pathway: not_defined # 75 503 61 466 469 360 45.0 7e-98 MTEKEFMEEDYRKRMEEHHRKMEIRREKRRQQRNFHIFLGILIPALLILTFVGLRFALPY MEEHNLLSFGKKTGPSWEKEVEPLSSGSDITINQGPEESTEEPLSEKEEALQAAELCAKQ YDYDKAIETLQALDSTGDSSISDKIAEYEAEKEKLVPADMDQITHIFFHILITDTDRALK DTRQGRQYNSVMTTIPEFKEIIKEMYERGYVMVHMHDIAEMQEQADGTKKMVKKQILLPE GKKPFVMSEDDVNYYIYMQGSGFADKMVLDEDGKPKLQYTDKDGNVSVGDYDIVPILDEF VEEHPDFAYHGHKAILAFTGYNGVLGYRTDETFDPNSSALDPKNKANPNIEEDKATVKKI TQVLKDDGYEFASHSWGHINFTNRSLEDIKRDTDRWKRNVEPLLPDSCDILLYPFGADIG DWHPYKKGGENGKYDLLEEAGFRYFCNVDSTQIWMQYGDQFLRQGRRNIDGYRLYESYSG KADRVSDLFDVKKVFDTRRPTPISWED >gi|333758476|gb|AFIH01000001.1| GENE 148 149212 - 150408 825 398 aa, chain + ## HITS:1 COG:MA2718 KEGG:ns NR:ns ## COG: MA2718 COG1104 # Protein_GI_number: 20091542 # Func_class: E Amino acid transport and metabolism # Function: Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes # Organism: Methanosarcina acetivorans str.C2A # 2 398 6 379 392 322 45.0 6e-88 MIYLDNAATTALSEKAGKAMEPYFSDLYGNPSSSYRFGQEAKRAIEAGRQALASFLHVSP REIYFTGGGTESDNWALLSLLGWGEKSPKHLLTSTIEHPAILRTASFLESLGVNVSRIPV DAKGFLNLEALENALKQSENTTCLVSVMAANNEIGTLQNLQEIGSLAHRYSALFHTDAVQ AFGQIPIAVEEMGIDLLSASSHKIHGPKGVGLLYIRKDLKLPALLHGGAQERGLRAGTEN VPGIVGFAAAAREAFSTMEERGRKKLALRNLFFKRLLEEVPGVEISGVNPLEKREADFPA ENTYSSLLQERLPGNVHVCIPGIEGQSLLMLLDQKGICASSGSACASGSLDPSHVLLAIG KSHEVAFSGLRLSLEESLTEEELEYTVEAIKEAVEKSR >gi|333758476|gb|AFIH01000001.1| GENE 149 150405 - 152396 1005 663 aa, chain - ## HITS:1 COG:lin0222 KEGG:ns NR:ns ## COG: lin0222 COG1501 # Protein_GI_number: 16799299 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-glucosidases, family 31 of glycosyl hydrolases # Organism: Listeria innocua # 52 654 145 705 763 376 33.0 1e-104 MIQHYRFGHPIHTGAVLDKPTMDITPVKDFPGWDISPSNGSLSKTLSESMRVFGLGETVR GMNKRGWIYISNNTDDPNHDEDKRSLYASQNFILLASPEEEEVEGIFIDDPGTVRFDIGY TELNRLIICSESGNADIYRFTADSADEIVRQFRAITGQSYIPPKWAFGFGQSRWGYKSEE DIRAVFTRYQDASVPLDSIYLDIDYMERYKDFTVNTESFPHFSDFVEEMRKSHVHLVPII DAGVKMEEGYETYEEGCEKDYFVKKENGERLVAAVWPGRVHFPDFFKPEVQNWFGHKYQF LLEQGIDGFWNDMNEPAIFYTEDRLKEVFEEIEKYKNENLDIQSYFAFTNLVSTLGNNPA DYRRFYHEHEGQTIRHDKVHNLFGFYMTKAAGEALRKMEPNKRILLFSRSSYIGMHRYGG VWTGDNKSWWSHLLLSLQQMPALNMCGFLYSGSDIGGFGADCTEDLMARWLSLAILTPLY RNHACAGTRLQELYQFQNLESFRKIIELRYALIPYIYSEFMKAAVKNEMYFRPLSFIWSK DSRAYEVEDQVAVGESIMLAPVVEQNHNGRAVYLPESMKMIRFKAWNDYTEEILPAGTHY VECRLFETILFLRKGHVLPLIKPAKTTAELDYASLKFLCYDADPKDYTLYNDDGFTRNLP FTF >gi|333758476|gb|AFIH01000001.1| GENE 150 152542 - 154353 1004 603 aa, chain - ## HITS:1 COG:no KEGG:Thebr_0271 NR:ns ## KEGG: Thebr_0271 # Name: not_defined # Def: Dextranase (EC:3.2.1.11) # Organism: T.brockii # Pathway: not_defined # 16 603 49 609 610 307 35.0 9e-82 MQAENTTSLRFHLNGSDKARYSPGDTVTLPCSLEITGYNGEILQLETLLFHNEVPVSKEE TVLQKNEFINPKISFVTPQKDYTGYLVKVIVKDEEGKELATDTTAIDVSSSWVKFPRYGY LCDYESSIHSEELIQQMNRYHINAIEYYDWHHLHHEPLPEGMTAENLSDWTDWAGRKISH ETLSRYIAAAKEKNMVSMAYNMIYAGTDSFFKDANGNPTPPCQWQLFFKEGNPKGKGPFL FTMGDSPSGDGHLYFVNPLHPEWQNYIFAEENRALDALGFDGWHGDTIGEFGEMTGADGE PLGYTEDGTAIYLVKDTYRSFLNNAKKALGKKYLSFNPVGAQGNEQANTSHTDVLYAEFW PWDAARDGELFNTYHAILREVERSREDSKAYSFDGVGKSLTVKAYINVDSKEEFMNDAAV LLMDSVSFASGGGRLELGNGNHMLHTAYYPDDKILMSDTLQKSIVRMYDFSVAYENLLRD GQYPIENKVEINDTPTSADGKSFTIWTYPKEDSEYQILHLINLRNNDNRWVDEKGKKKEP EIQKDLKVKFYTEREISSVYLASPDFSDCESLSLSHEKGTDKNGKYITFTVPALQYWDMI YMK >gi|333758476|gb|AFIH01000001.1| GENE 151 154430 - 155305 493 291 aa, chain - ## HITS:1 COG:lin2267 KEGG:ns NR:ns ## COG: lin2267 COG2207 # Protein_GI_number: 16801331 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Listeria innocua # 38 279 29 285 292 85 25.0 8e-17 MGLIEYEQVIPEINCFCKVFHSQLIEEEKKSPTSHPLPHWHSSYEFNVCINGRLENHIEN KVSYIESEEFVLINPNVVHTSFEVSEDYLGFAVLIPEEYIRMYFEKQDIKQVLLFTEKDY APHKAEIWQLLYKLYLYSLSTASNRIIGMNSCVLSIFTLLLSEKEAEKENADTEEALFAK SGSQYTDYVNVHYRENIQLKDVASHFGFTATYFSKLFYRETGRNFKYYLSSIRLSHAVFL LKSTGLSITEIAERSGFPKLRAFTDLFLKVNGMTPKEYRDQYRKEMKRLQK >gi|333758476|gb|AFIH01000001.1| GENE 152 155506 - 156840 1216 444 aa, chain + ## HITS:1 COG:alr4277 KEGG:ns NR:ns ## COG: alr4277 COG1653 # Protein_GI_number: 17231769 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Nostoc sp. PCC 7120 # 62 440 67 461 461 115 24.0 2e-25 MKKKVLASIMATLVATTALFGCGSTSTDSGKSETSSLQEKADGEEQKASEEGIAYNGEEA TVTYWHTHSDAEEEVLTEQIIPEFEKRYPKIHIDAVRMPYDGLMQQIITGISGNTGPDLM RMDIIWVPELAKMGALEPVDDLEGFKEMKDKLFEGPLKTNYYNGKYYGLPLNTNCLSGTW SKAVMEQLGLKDFPKTYDEVVALKDKLNKDQYLIACEGPNPWSMAPLFNSLGGVYTNEDY TKASGYLDGEASIKAMETIVKWYDEGIIGPCMNGGKPDAANGLYDGQYLFSYQGPWFYAN DDEEQIAKVQGGLLPAGSAGSLTVNGGEDLVIFNGSKVKDAAWVFAQFLMSDYAQTAQAV GGGHLVPTVKSVAESEEVKNTPYMDIYLKQLEGAVPRTPTPVWEKMSDKLTVAFTSCLLH EDEPASALKKAATEIDALLQDADK >gi|333758476|gb|AFIH01000001.1| GENE 153 157023 - 157961 854 312 aa, chain + ## HITS:1 COG:TM0811 KEGG:ns NR:ns ## COG: TM0811 COG1175 # Protein_GI_number: 15643574 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Thermotoga maritima # 23 309 20 293 300 149 33.0 5e-36 MGEQSFSRRFKKGIREWISVIPFLLIGTVLFILFVLYPQIKNIYISFTNYSIMPGAKNEF VGLANYRKIFTDIHVKGSDAYFFWMAFRNNILAILITVPGQLILGLLVAVFIHNLRFGKN IYKILLYIAVICDWVVFCNIVDYIFQPDNGSLVNYILTSIGILKQPVSWLKNTWTANFVI WFCSIWKGFGWVMIIYTAGLQGIPMDRYEAAKVDGANNVQMFWYITVPGLKATTFYLLIN LINGAMNIFIQVFLLTKGDPIGTTDVVMDYVYRRAFNYFEFGYAASCGLVMGGVVFILSM FLKKYLRYGQDE >gi|333758476|gb|AFIH01000001.1| GENE 154 157973 - 158812 633 279 aa, chain + ## HITS:1 COG:BH1866 KEGG:ns NR:ns ## COG: BH1866 COG0395 # Protein_GI_number: 15614429 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Bacillus halodurans # 3 278 12 284 285 135 32.0 1e-31 MKKKQTMEQLLVHILLILICAISLLPFLSMVSTSFMKVKGVLPNEPIILPKLPLYTKNYV KVWFSGHFQTYFLNTVIVTAGGVFINLFVSVTMAYSFAKFKFPGKEFLFNILLLTMMIPA QLAMISQYTVLNGLHLIDDYKGIWLLWGGTCAAGSTFFYRGFFEAIPRELEESMYLDGAS RLQTLLHCIIPLSKPAIATQVVFALNGYWSNLFDILTFTKSMNKRTLSVALQLFRGQHTT EFGRLFAASTIVILPNILLFILFQKQFIKQGLTEGAVKE >gi|333758476|gb|AFIH01000001.1| GENE 155 158892 - 162287 2321 1131 aa, chain + ## HITS:1 COG:BH1905 KEGG:ns NR:ns ## COG: BH1905 COG1501 # Protein_GI_number: 15614468 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-glucosidases, family 31 of glycosyl hydrolases # Organism: Bacillus halodurans # 488 1003 154 670 773 231 28.0 5e-60 MDIEKENSYGIGAVYLGKAVKGFSERENAADREKAVHFETFYSAGGRATLSKTEAEMLWD KSNLYVKVTCYENSPRVLRLKDGNTRESEWMKRKDKVELVLSGKRFGQRDYAVFTADSDG RQDAHTEKGMTYHGGDQAILNDDFQEKNEAEIGKIPDSAYQLGLEVREDSWTASFAIPWT LFGGIPDEKDCFRFQIYRKKNQTNELLALTPLDLNSNYENKFDYDPETFLECYFGEKASV EYVKCACIILPSGIMHWQRPAVLQWPSSLSRKKILDLQKTEEETTEENLADRIVTVQCWQ DVLILEGLDFFPNARCENAFDKVDPWVQRRLCNEALRKKEIQEACKALDKLISYLRTLTS WWYADGTLGNADEGNWKSFSSLESVEAGEDRVTLSFLMEGELKKAYLIPQKKAVRFYLEK KGDFEGVPVPFKLEREKDCFRISGSSGEVTIVPGKKWEISIEDKFLLNQENLRLYRTKGR MAFDLRQSMHPEEMLYGFGERFDAVNQSGKILSLWHRDAFEGCGCSIGNQSYKNIPLLHS TAGYSLFMNSFYRIRVDSGREYHGLRVSTMGEKTDFTIFTGSPAENMNAYTELTGKPLLP PEWVFEPWAGGGVGRWGDGPTHDVVKEMEGVINRFQNLDIPHSGLYAEGAGWKFGDHYNK EELYQIADFAHQRGIRVFSWQFSHIGEEEAAAYLPNCPREELPITRTPFYTGSKKLPSEI DFSHPRAMELLEAEWKDRMDAGFDGTMVDFGEITPDEAVFYDGRKGDEMHNAYATAYTEA YRKLFLKYRGEDHVLFSRSAAAGTQSYACQFGGDQLSGFRGLTYSIHGGLSAGASGLPFW GVDAGGYDGLCDEESYIRWTEFATFCPIMRYHGTQPREPWVYSDYTVRLYKHYAWLRENL LPYSVQTAQLAHRDGMPMMQSLPMAFPGDKKAIAVEDEYMYGKSLLVAPVHEEKEEREIY FPKGKWINFFDFREIVQGGKSNVKKVPIEKIPVYIKEGSFIPLELNGDLNLGESMSAERK KVLLVALPEAESHTSEEDSALPYFFRKKEGDWEIVMHKMKEFSYLLLPGLADFLKEKEAK KNCCEIRLNGEPLKKLPSVNALRYEAGFFLREDGALVIRLMPEEDIVITVS >gi|333758476|gb|AFIH01000001.1| GENE 156 162475 - 165063 1812 862 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 1 855 1 806 815 702 42 0.0 MNINRFTQKSVESINNSQKIAMDHGNQALEQVHLLLSLLQVEDSLIAKLLQKMGIPLDSF TRAVEEKINALPKVSGGQQYFSQDANKVVMNAEDHAKAMGDEYVSVEHIFLALLKDGDKT IRELFKEFGITKEKFLSALSSVRGNQKVMTDNPEGTYDALNKYGYEMVERASQQKFDPII GRDEEIRNIIRILSRKQKNNPCLIGEPGVGKTAAVEGLAQRIAKGDVPESLKNKKIFALD MGSLIAGAKYRGEFEERLKAVLDDVTKSEGEIILFIDEIHNIVGAGKTEGSMDAGNLLKP LLARGELHCIGATTLDEYRKYIEKDAALERRFQPVMVDEPTVEDTISILRGIKERYEVFH GVKITDTALVAAATLSDRYISDRFLPDKAIDLVDEACAMIKTEMDSMPEEMDEQQRKIMQ LQIEELALKKEDDQLSKERLVALQKELSELRDKFNVQKAQWENEKNAVSKLQTLREKKND LQAEINIAMQKGEYEKASKLQYQDLPQVEKELEEAEALAQKEENSTLVHDKVTEEEIARI ISRWTGIPVTKLNESERSKVLHLDAEIHKRLIGQEEAVEKVCEAILRSKAGIKDPTKPIG SFLFLGPTGVGKTELAKSLAQNLFDDENAMVRIDMSEYMEKYSVSRLIGAAPGYVGYEEG GQLTEAVRRKPYAVVLFDEIEKAHPDVFNILLQVLDDGRITDSQGRTVDFKNTIIILTSN IGAQSLLDGIKEDGTIPEEVRKEVTDALHAHFRPEFLNRLDEIILFKPLVQKDMERIADL VLKDINKRLQDKRLHIEIAKDALEFILENAYEPGFGARPLKRYMQKHVETLAAKCILEDK VKEGDKIEILLKNGELHAEVKS >gi|333758476|gb|AFIH01000001.1| GENE 157 165187 - 167679 2434 830 aa, chain + ## HITS:1 COG:no KEGG:Ccur_13730 NR:ns ## KEGG: Ccur_13730 # Name: not_defined # Def: putative collagen-binding protein # Organism: C.curtum # Pathway: not_defined # 48 682 113 679 963 181 28.0 1e-43 MKAKRNLLALLLSVVMLWQGFSVVNAEDASTASGSTVSLSSSAVGGESRAAAKEIPDAVR SVEMTLDNKPVDANTKIYYFTQFALKVKLALSGKAVSEGDYTVIQLPDALEAAENEDVPI KNDDGLVMANAHFDRGTKRITITYTKNAENYSGSDGSFTFLVQIDRSVVQTKQRVPVNIT INGKVVASVDMDYQGVTKDAEPSFWKNHGGKIETYEDADGLTHYLLHFYIQVNGRKLTTD GVVSEKYTNIKLYDKLISEVFNYVDPSDPTRSMNWKNASDADQFYPRLVRGVWRSGYRDS NYVFHTATDDTEANRGPKWALMNPQNNNQPAGGERVSLHYAPDKRSFDYTVGDMGLGEGI ELQYFVEIGEVPQDGTTYYNDASITGDSIRMGTHHREFAVQKAGGTLNGKGFTLRIKKEN EDRQPLSGAKFTIENTRTKIKKEVTTDVNGIAELKNVVREEYVIKEVKAPDGYVLDENEQ YITKEDLKTSITDGATVTKVFVNKKEGEDKPASGNIVIQKKWILGGSSVQKPNKVKVYLL ENGVKNENKVQELSEENHWTASFSNLPKKDSAGADIRYTVAEEDLSDFTPAISGTEDTGF TITNYTGDRVAIPVTKIWKGSGEHPQGLTVQLYADDVRVSSAYLTAQNGWQYTFDMPKYN DAGKEIKYTVTEENLSGYTASRADKEKNGYKNVFVNTKENPNTPGGGGNTPNTPGGGGNR PNTPGGGGNTPGTPSGNTPRNPSNPPSNTPEEPGSVLGADRPSVGNQTVNTEREGAVLGE NRPEVKGSGRGATKTADQSAMKLYGILFALSVLSLGSLSFKNFIFKKREF >gi|333758476|gb|AFIH01000001.1| GENE 158 168139 - 168696 627 185 aa, chain + ## HITS:1 COG:no KEGG:Closa_1050 NR:ns ## KEGG: Closa_1050 # Name: not_defined # Def: C_GCAxxG_C_C family protein # Organism: C.saccharolyticum # Pathway: not_defined # 10 164 5 156 166 185 57.0 6e-46 MESIITYHAKEVSPHAVLKNAEELYAGGFFCCEAVMKAIRDAFQADVPESVIAMSSGMSI GAGRSGCMCGALNGGILALGMFFGRTTPDGPKDPKVNALMALSKELHDWFREANAKHAAC CRVLTRGFEMAEGEHKKQCIAFTGLCAGKVAEILCRELGVKNVDSEPIQGLEAPFLPPVH EEKAV >gi|333758476|gb|AFIH01000001.1| GENE 159 168712 - 169623 1006 303 aa, chain + ## HITS:1 COG:SA1016 KEGG:ns NR:ns ## COG: SA1016 COG1275 # Protein_GI_number: 15926756 # Func_class: P Inorganic ion transport and metabolism # Function: Tellurite resistance protein and related permeases # Organism: Staphylococcus aureus N315 # 3 303 2 304 315 127 32.0 3e-29 MEKIKKIPFAFSGVMLGMAALGNLLQSYGEGIRLVFGCVAFVILILLLLKLILFPNAVKE ELSTPIGAGVFATFPMALMLFSVYVKSFIPGISFPLWVFANAIHIVLILYFTKTYILHFE EKNVHTVWYIVYVGIVVASLTTPAYKTFAYGQAAFYFGFVALLILLCVVTKRYAKLPVPD PAKPLMMIYAAPMALCTAGYIQAFPEKNKSFVLFLLVATSVIYLFALFKSVQFLRFPFYP SYAAFTFPFVISAIATKQCFVVLTKMGMNVAFLQPVVLVETIIAAVFTIYACLRYFQFIL AEK >gi|333758476|gb|AFIH01000001.1| GENE 160 169651 - 169806 77 51 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MCKFYIKPFLTNKSKVFKVVLKTEVIMNKKVPVWALFLWGVFYFFYKPKAV >gi|333758476|gb|AFIH01000001.1| GENE 161 169908 - 170774 692 288 aa, chain + ## HITS:1 COG:Cgl2407 KEGG:ns NR:ns ## COG: Cgl2407 COG1175 # Protein_GI_number: 19553657 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Corynebacterium glutamicum # 5 288 6 281 281 216 45.0 4e-56 MKKSKKGFFLFMAPALVAFTLVQLIPTVMGIGYSFTDWNGISKAKHFVGVQNYITILTSD LSFRNAFIFTFLFSVCAVISVNLIGFVLATLVTQRIKGVNFLRGIFFMPNLIGGILLGFT WQFIFVQVFEAIGKKLGILWLRGWLTDQRTGFLGLLIVVTWQLSGYMMMIYIAQLQNIPE DVLEAAELDNAVGWNRMRYIILPLMMPAFTIGLFLSISNAFKLFDQNLSLTGGGPVNSTQ MLALNIYTTAFGENRFGLAQAKAVIFMIVVMAISVIQLSITKRREVEA >gi|333758476|gb|AFIH01000001.1| GENE 162 170774 - 171598 348 274 aa, chain + ## HITS:1 COG:Cgl2406 KEGG:ns NR:ns ## COG: Cgl2406 COG0395 # Protein_GI_number: 19553656 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Corynebacterium glutamicum # 9 274 33 303 304 175 37.0 9e-44 MKSKRVIKRLSIMAVGFVLALLFVSPVFILVNSSFKSLQDIYINVLALPKQLSFQNYTKA FKEMDYVKAFMNSFAITCISTALIILISSMAAWVLVRYKTRTSKILFLMFAAVQLIPFQC VMLPLVDIMSKLHLMNRPGLVFMYMGFGCAMSIILFHGFIKNIPIELEEAAIIDGCNMVQ TFINIVLPLLKGIIATVAVINVMWIWNDFLLPSLVINKNGMQTLPLRTYLFFGQFTKKWD LATASLMLCMIPIVLFYLSCQKYIVKGITAGVGK >gi|333758476|gb|AFIH01000001.1| GENE 163 171733 - 173046 1218 437 aa, chain + ## HITS:1 COG:Cgl2408 KEGG:ns NR:ns ## COG: Cgl2408 COG1653 # Protein_GI_number: 19553658 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Corynebacterium glutamicum # 12 437 7 440 443 137 29.0 4e-32 MVKKKEMAVLLVAAITLGMMSGCGSKTGAGSAEGDTVTINLYQNKSEIADPLQKVADAYT KEHPNVKINVESIQGNDYNTNLKAKLMGNNAVDIFALGDNITNMMDYVEDLSAEPWVKNA VDGSIDDVTVDGKVYGLPVSVEGYGLVYNKEIFKDAGIDASTLTSYDAIDKAFADLQEQI DSGKLKDKYPQLEAVEDYAAKETWIPGLHTLNVPLSCEYKSATELRNSDELGLKYADSLK ALLDLETKYTPSRNDLSKLNAVDYSTEIGGGLAIERIAVVQQGNWIGPELKGIDEKTANK MGMLPIPTKGVKEDCISVGISIHWCVNKQSDEKVKVAAKDFLNWLFQSDEGKQLVVNELG FVPAFKNYEGIEISDPLSQEVKRYIDAGKTTSWVMGGFPSGFEPKAAADFQGYFSGEYSF DDMISHLKADFKELKKS >gi|333758476|gb|AFIH01000001.1| GENE 164 173133 - 173738 199 201 aa, chain + ## HITS:1 COG:BS_sacC KEGG:ns NR:ns ## COG: BS_sacC COG1621 # Protein_GI_number: 16079757 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-fructosidases (levanase/invertase) # Organism: Bacillus subtilis # 2 201 32 245 677 190 47.0 2e-48 MEKYRPKFHFSAEKYIINDPNGLVYYEGEYHLFHQYNIQEEIYWGHAVSRDLIHWKRLAN AIAPDEHGQIWSGSAVVDEENHRLAAFFTYCERGTEKQSQGLAFSYDKGRSWEKYEKNPV LTEERKDFRDPKVFRYKDKWVMVVTGGDCVLLYESKDLIHWKQISSFSGTESDHVGTWEC PDLFPLKVQDSEEKNGFLSSV >gi|333758476|gb|AFIH01000001.1| GENE 165 173768 - 174526 417 252 aa, chain + ## HITS:1 COG:BS_sacC KEGG:ns NR:ns ## COG: BS_sacC COG1621 # Protein_GI_number: 16079757 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-fructosidases (levanase/invertase) # Organism: Bacillus subtilis # 1 246 258 509 677 139 31.0 6e-33 MKYFIGEFDGISFRPDEEKQEGHWLDYGKDFYAGVSWNNLPDDRRLMIAWADNWQYRDFL PTSPFKGQMSSIRELKLKKRGSKFYLTQIPIEEMCALRKNKQEMHKMKMGAGEEWTLKDC SEALDLELYYPTNKMGASSFGIRAVTGQGKQLEILFSKEERSCTVDRMNTGLNPHENFPG KYKAKVDFEKEYLNLRLILDVSQSELFINDGELVFSNLIFPEEPYQLKLFAEGGDLEIER SAIYELTGDVIN >gi|333758476|gb|AFIH01000001.1| GENE 166 174585 - 175586 634 333 aa, chain + ## HITS:1 COG:L0147 KEGG:ns NR:ns ## COG: L0147 COG1609 # Protein_GI_number: 15672707 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Lactococcus lactis # 2 315 21 327 346 115 27.0 8e-26 MMIIREIAEQADVSMTTVYNVLHGNVKKVSKENTKKIQKLLDEYHYVPKLGLRALKNNSS KIIGVVIHSSRYYENSAISDTFYSHIIGAMEEMLRKAGYYMMLYAAQNLEEIFHMALAWN VDGLIAITFTYRDYIKLKTLVNKPIVAIDLINKENSDYVNVGLQDKKGGYIMTKYLLEKG YESIYVCARKNIGVDHERWLGYREAWKEAGKEFLSNDFLCLYETEQRRNENYKMMSRFAG KKTAFFFLADAFAVEAMHYFHDLGIKIPEDIGIAGFDGNILGKYCYPRLTTVYQDVSEKG RMAVKLMIDLLEKRLLDGLDVSRPVTLIPGHST >gi|333758476|gb|AFIH01000001.1| GENE 167 175689 - 176582 432 297 aa, chain - ## HITS:1 COG:no KEGG:Closa_1057 NR:ns ## KEGG: Closa_1057 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 43 134 18 108 336 84 42.0 6e-15 MKKKTREKARLFRAPKNLMHSPGNSLCILPGLLCAFMSFVFLLSGTAKADWVKGNSKNAW WYDLGNGNYYKSSWQWIDGNHDGIAECYCFDENGWMFENAITPDRFTVNENGAWTVDNIV QTKSANLISQNNTNNNTDAVSNTFTETKNNNLSETRNNEKNQSIEDFNERQDEYRADLLR RVNKYREKKGLNSLEENDYLNEMAQIRAEELSVRMSHIRPNGELASRYGVNGEIITKGPK TPKDAFHAFYVSKQHNELMLDREFLTFGSGYYVDGNGKSYWVILFSTHPEPENLRQQ >gi|333758476|gb|AFIH01000001.1| GENE 168 176817 - 177203 197 128 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148984704|ref|ZP_01817972.1| 50S ribosomal protein L20 [Streptococcus pneumoniae SP3-BS71] # 8 121 7 126 126 80 38 3e-13 MSPFSFNHFNFNVLDLERSMKFYEEALDLHELSRNERDDFIIVFLGDDSTDFRLELTYMK DRTEPYDLGEQEYHLALRTEDMGAAHALHEKMGCICFENHGMGIYFIEDPDGYWIEIIPD RTKPITWQ >gi|333758476|gb|AFIH01000001.1| GENE 169 177318 - 178589 1312 423 aa, chain + ## HITS:1 COG:lin1549 KEGG:ns NR:ns ## COG: lin1549 COG2256 # Protein_GI_number: 16800617 # Func_class: L Replication, recombination and repair # Function: ATPase related to the helicase subunit of the Holliday junction resolvase # Organism: Listeria innocua # 15 421 3 404 427 371 46.0 1e-102 MDLFSYQAEKNQEKMAPLSVRMRPGNLEEFVGQEHIIGENKLLSRLIRADQLQSLLFFGP PGTGKTSLAKLIANHTKAEFIQINATTAGKKDMEEAVSRAKENLGGYGRKTILFVDEIHR FNKAQQDYLLPFVEEGTVILIGATTENPYFEVNSALLSRSRLFELKPLSKEALSHLTDEA LSDKKRGLGNFRTSLSEEGKEFLLENALGDARVLLNTLELAVLSTNPDSDGVIRLSKENI GECMQKKLLRYDDSSEHYDTISAFIKSMRGSDPDATVYYLAKMLESGEDIRFIARRIMIC ASEDVGNADPQALVLAVNASLAVERVGMPEAQIILTQAACYVATAKKSNAAVKAIFAAND VVRKKGNLEIPSYLRDAHYSGHEKLGRGIGYKYPHDYPGHFVEQQYLPEEIKDYRFYEED FKK >gi|333758476|gb|AFIH01000001.1| GENE 170 178663 - 179526 929 287 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227873103|ref|ZP_03991397.1| ## NR: gi|227873103|ref|ZP_03991397.1| conserved hypothetical protein [Oribacterium sinus F0268] conserved hypothetical protein [Oribacterium sinus F0268] # 1 287 1 284 284 349 68.0 1e-94 MKKTIWFCLAGLMLFATACGKKAEDTKNTTQAVQEEPSSEALTENSLSATVQKLENGKLT VETGDGKVMNFDVTGATLDKNWELMPGDEIEIGYEGTEPQDGMKVKKVTVSVPYEFTVED FNDEQNFYGEITAVTDTSLSVKEIPDFRAAALEGENTEGKKYGDTVTFQRASFETDLTKE GLKVGSEISVYYLGDLNNNPLAFYTITEDSLDDEAADTLKVKGTIETIDGDIFTLKGDDT HSFRFTTNGDDELLKEAEANKGKTVEVSYSTSLKARASLAEAIKVVE >gi|333758476|gb|AFIH01000001.1| GENE 171 179669 - 180115 479 148 aa, chain - ## HITS:1 COG:HI0670 KEGG:ns NR:ns ## COG: HI0670 COG1490 # Protein_GI_number: 16272612 # Func_class: J Translation, ribosomal structure and biogenesis # Function: D-Tyr-tRNAtyr deacylase # Organism: Haemophilus influenzae # 1 140 1 139 144 153 55.0 1e-37 MRCLVQRVLSASVSVSGESLGSIERGYLILLGVNNQDTEAVADKMLKKILDARLFEDENG KTNLSIRDISGSLLIVSQFTLYADTRKGNRPSFIQAGDPAHANALYEYFLQKAEEAGIPT AHGQFGADMKVSLVNDGPFTIMYDSDAT >gi|333758476|gb|AFIH01000001.1| GENE 172 180126 - 180302 224 58 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSLPKDPMILLSFVNTKLRDEFTDLEEFCKEENISIESLKEQLESIGFQYNETIRQFK >gi|333758476|gb|AFIH01000001.1| GENE 173 180358 - 180924 345 188 aa, chain - ## HITS:1 COG:no KEGG:Closa_1554 NR:ns ## KEGG: Closa_1554 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 2 188 4 185 206 152 43.0 5e-36 MDEKLLKELIEYLRNLHHVHGNALPSLELYMDQVTGFMDEHLSSMRRHKEDKALTKTMIN NYAKNKILPPPVRKRYNKNHMLILLFIYYYKSMLSLSDIETILRPLNENYFYSTKSPQLK DIYEEIFSFANIEMQNVMADVEESFEKAKNSFSEKDPLFENLPEEERQDLQKFCTLSLLA FDVYLKKQ >gi|333758476|gb|AFIH01000001.1| GENE 174 181246 - 183564 2288 772 aa, chain + ## HITS:1 COG:SP1087 KEGG:ns NR:ns ## COG: SP1087 COG0210 # Protein_GI_number: 15900955 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Streptococcus pneumoniae TIGR4 # 7 771 8 761 763 588 42.0 1e-167 MDLEAILNKEQAEAVRHTEGPLLVLAGAGSGKTRVLTHRIAYLIEEKGVFPSHILAITFT NKAAKEMQERVAKLLPLESGGVWVSTFHSMCLRILRRDISLLGYGTDFSIYDTDDQRTLM RQILKERKIDSKTLRERAVLSQISQTKNRGGNAEDYLKESEGDYISKLIYDCFTLYEEKM KKNNALDFDDLLLKTLDLFQDFPEVLSRYQERFRYILVDEYQDTNDVQFRLIYALAKKYQ NICVVGDDDQSIYRFRGANLENILSFESQFPSCHTVKLEQNYRSTAPILDLANAVIAENP RRKEKKLWTEKKEGKKVVFREYESGEEEAREVIKTIRGKGLLYKNFAILYRTNAQSRLFE EQCINWNIPYQIVGGVNFYQRKEIKDILAFMKLMVNTKDDVAFRRVINVPKRGIGDASLA KLEDYGVNLGGFSLMESLPFAKAAGLSGKALSEIHKFEEMVEGWKEEALDTLIERILKDT AYEADLQSEGAIEAESRMENIHELEGKLFSYIRENGEEASLSAFLEEVSLLSDLDRSDLT EDKITMMTLHGAKGLEFPVVFLVGLSDGLFPSSMSFGNEEEMEEERRLCYVGITRAEEEL YLSSARKRMVNGQSQYFKISRFFEELSDELMEKNLLFTPKRSEEELFMEESGRSYYNSYL NNARSSILTYQGRSGGGFSGGNSYGEKRAGEKKNAFGSLDSLKQSGLLQKGFASAGKEKP DYKEGDRVSHMKFGEGTVLSLEEDKKDYLVTVLFDKAGQKKMMAGFAKLQKL >gi|333758476|gb|AFIH01000001.1| GENE 175 183775 - 184281 333 168 aa, chain - ## HITS:1 COG:CAP0111 KEGG:ns NR:ns ## COG: CAP0111 COG0454 # Protein_GI_number: 15004814 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Clostridium acetobutylicum # 10 165 6 159 162 103 32.0 2e-22 MYTDGRYLFRAAETDDVKVLWEMEKICFPENEANSYEDVKNRVEKAPEDYLIAFDQVNGK IAGYLSGIHSSSDCFLDKFFTDASLHEKDAKHCYLLSLEVLPEYRGKGIASKIMERYLKK EEERGTEKVFLTCHAHYIPFYEDMGFEHIGTSPSVWGGEIWEDMIYRI >gi|333758476|gb|AFIH01000001.1| GENE 176 184579 - 185073 627 164 aa, chain + ## HITS:1 COG:CAC2413 KEGG:ns NR:ns ## COG: CAC2413 COG4708 # Protein_GI_number: 15895679 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 9 157 8 157 166 81 38.0 6e-16 MHFQDKRTKMMTEAAIIAAVYVALVLLFKPISFGAIQFRIAEALCILPFFSFSAVPGLAL GCLLGNFFSGAAMPDVIFGTLATLLAAIFSYKLRNVSKWLVCIPPILANAIIVPFVLQYA YGVPDAYYFLFATVGAGEVLAVGILGNILLLALESRREVIFRTQ >gi|333758476|gb|AFIH01000001.1| GENE 177 185184 - 186596 1296 470 aa, chain + ## HITS:1 COG:CAC3225 KEGG:ns NR:ns ## COG: CAC3225 COG0773 # Protein_GI_number: 15896472 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate-alanine ligase # Organism: Clostridium acetobutylicum # 2 458 3 457 458 413 46.0 1e-115 MYDIHFDRPIWVHFIGIGGISMSGLAEILHDRGFTVSGSDMKASPLTDHLKSLGIQVSVP QSPDNVKSGIELCIYTAAIAESNPEFQEVKRQGIPTMSRAELLGRIMKNYKEAINVSGTH GKTTTTSMIGEILLEAQMDPTITVGGMMKDIGGNLRVGKSDVFLAEACEYTNSFLSFFPT IEVVLNVEADHLDFFKDINEIRQSFRKFIEKLPENGILVFNKDIPHSEYFLENLPGRKII TFGHNNADYTANFISYDHFAHPTYTLFERGEDRGQVTLGVTGEHNIYNSLSAIAVARAIG IPLETIKDALASFGGTDRRFQRKGTLNGFTIIDDYAHHPQEIAATIATAKKYVHKRLWVV FQPHTYSRTLALMDDFAGALSQADEIILADIYAAREKNTVGVSSDDLRKLMLSQNTNVYY IPDFPSIEKFILSHVKEGDLLITMGAGDIVNVGDHLLSLPGAEKAEDWRS >gi|333758476|gb|AFIH01000001.1| GENE 178 186619 - 187506 766 295 aa, chain + ## HITS:1 COG:FN0789 KEGG:ns NR:ns ## COG: FN0789 COG1284 # Protein_GI_number: 19704124 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 6 285 4 276 280 101 27.0 2e-21 MGALQKYKGKILNYLQIIVGCFITAFAVNSILIPNKLSTSGVTGISQMVQSFTGINYSYI YYFFSITILILAFFCLKREEFMKIIFVSFLYPTLLVLTRMFHFVFVQGEMFLVCIYFSLF YGFGSGLVLRAGVTFGGTDTVARILNRKIFKNVALSRIMLILDGSILISLGFVFGKNVAL YALVNHVICIYIMDYMLFGFRQKLYKAQIIPFDNADSEEIAKYILGIGRGVTIHKVVGAY THSDKTMLSSIVSPRQSALIRSFLAEHYPKSFMEVSPIVTVYGIGERFIRIQGED >gi|333758476|gb|AFIH01000001.1| GENE 179 187686 - 188684 654 332 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227873097|ref|ZP_03991391.1| ## NR: gi|227873097|ref|ZP_03991391.1| hypothetical protein HMPREF6123_1330 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_1330 [Oribacterium sinus F0268] # 8 247 4 227 229 142 43.0 5e-32 MGRAELQGKEREQYSWKSKKLDYTLVGKQIKKYRILKNLRQKDLAELVFATTNTISRIEI GNTGCSLELLLAISDVLEVSPDALLFGNFNPLYSRFYPYFWQMKEAIFRKVEESLQEGFR EMEQKEALFSVEKDFHDWIARIGQTEKVAERPDSEEHFGGNTPSEEEDPGKEGEYDDTGN SYFYSSLEAIPKSSEPEVENGEEGNEADKTQEWKAAIGGRKKKSSWLLDEWTKETRKKRE EEERARRSGIREEIRKEKERIRRLEEETAEAKAKLAEKERREESFSYAADSFLFPKKELA ESGKMEQEEGKKLKKEKAEKVQQRIRLKKTEE >gi|333758476|gb|AFIH01000001.1| GENE 180 188904 - 190202 1714 432 aa, chain + ## HITS:1 COG:CAC3539 KEGG:ns NR:ns ## COG: CAC3539 COG0766 # Protein_GI_number: 15896775 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine enolpyruvyl transferase # Organism: Clostridium acetobutylicum # 1 415 1 413 418 412 54.0 1e-115 MDEVFIMRGGKALRGEVVIGGAKNAALGIVAGALLTEDRVTIENLPDVRDVNVMLEALKE IGADVQRIDAHTVAIEAKNLHIHSIDDEYIRKIRASYYFIGALLGKYHEATVPLPGGCAI GQRPIDQHLKGFRALGTKAEIENGYLVAKAEDGLIGSHIYLDVVSVGATINIMLAAALAE GLTIVENVAKEPHIVDVANFLNSMGANIRGAGTDTIRIKGVRRLHGTTYAVIPDQIEAGT FMCAAAITRGDVLVKNVIPKHMESISAKLLEMGNTIIEYDESIRVIGKLEQQSTDVKTLP YPGFPTDMQPQISATLALAKGNAVVTESIFENRFKYVDELTRMGATIKVEGNVSVIEGQK SLSGASVNALDLRAGAALVLAGLAAQGITVVHDIGYIQRGYEHFEEKLQGLGADICLAEN EKDQKKFRLQVV >gi|333758476|gb|AFIH01000001.1| GENE 181 190206 - 191390 1041 394 aa, chain - ## HITS:1 COG:PH1043 KEGG:ns NR:ns ## COG: PH1043 COG1473 # Protein_GI_number: 14590880 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Pyrococcus horikoshii # 7 382 9 375 387 231 36.0 2e-60 MNSLALATEFEEELIRMRRYFHAHPEVSWEEWNTQKKIIEILEQEGIRTLTPYKTAVIAF VSGTKATDNGDKKKKILGIRADIDALPLQEKNSCSYISKNDGVMHACGHDAHTAILLATA ILANRHKEEFSLDFHFVFQPAEEFIADSGAGYLKDLPAVKECDRMIGLHVFTAFAPGIAS LPVGPVMASADTFSVEIRGKGTHAAHPEHGIDPISVGVSFCQALERVKARELSSVRPSVI SVTAFEAPSNFNIIPESALLKGTCRASDPAQREEYPHILERLAEGIALETRAEIKVSYFP GPPVTINDEEAVLTGQKALKHVFPKDKIQTLPFITGGEDFAKYENPKAFLVLGVGKEEEA LRSPQHSPYFQIEESVLKYGVAYFLEYANCYQAE >gi|333758476|gb|AFIH01000001.1| GENE 182 191415 - 192209 699 264 aa, chain - ## HITS:1 COG:CAC0509 KEGG:ns NR:ns ## COG: CAC0509 COG1387 # Protein_GI_number: 15893800 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Histidinol phosphatase and related hydrolases of the PHP family # Organism: Clostridium acetobutylicum # 1 263 1 236 244 148 34.0 8e-36 MQLRCDVHTHTLYSRHAYSTILENVHAAKEAGLELLGSTDHFSSMLYPEYENIRHYQYLC VSHTWPKEIDGVRLLQGCEVDIVDLDGHLFGYDIPIAKNIDGDFYNDKKTLSLYERVTRK MDYVIASVHKHSFADSATPLECTKLYLEALRNKKVLILGHIGRSGLPFEIDPVLLAAKEA HKLIEINEHSMDSGNHCIDRCRAIAVRCAELSIPISVSSDAHFALRIGQLDKVKKLLSEI HFPEELIATRSKDSFLSAMKDAGL >gi|333758476|gb|AFIH01000001.1| GENE 183 192226 - 192981 705 251 aa, chain - ## HITS:1 COG:lin1894 KEGG:ns NR:ns ## COG: lin1894 COG0708 # Protein_GI_number: 16800960 # Func_class: L Replication, recombination and repair # Function: Exonuclease III # Organism: Listeria innocua # 3 251 2 251 251 384 74.0 1e-107 MKKLISWNVNGLRAVMGKNFMEDFRKLDADIFCLQETKLQAGQIELDLPGYFQYWNYAVK KGYSGTAIFTKEEPISVSYGIGVEEHDQEGRVITAEFKDFYLITVYVPNSQGELKRLPYR MEFEDAFLSYILNLEKKKPVVYCGDLNVAHEEIDLKNPDTNHLSAGFSDEERAKFSRVLD SGYLDSFRYFYPEKEEYSWWSYRTKARERNVGWRIDYFVVSKKLEKKLHSASIHTEIMGS DHCPVELILDL >gi|333758476|gb|AFIH01000001.1| GENE 184 193235 - 193489 226 84 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227874119|ref|ZP_03992325.1| ## NR: gi|227874119|ref|ZP_03992325.1| hypothetical protein HMPREF6123_2264 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_2264 [Oribacterium sinus F0268] # 1 74 19 92 93 79 64.0 8e-14 MASKTLEEVAEYIKKIRFKKGFFGLKPTSVWKKLEDLDAEYRSVFYVQEVSYEARIKEKE EKIAELEKRLSELKSPTSEGAENG >gi|333758476|gb|AFIH01000001.1| GENE 185 193482 - 194048 572 188 aa, chain + ## HITS:1 COG:no KEGG:SPAP_1194 NR:ns ## KEGG: SPAP_1194 # Name: sipA # Def: signal peptidase-like protein SipA # Organism: S.pneumoniae_AP200 # Pathway: Protein export [PATH:snp03060] # 1 185 1 180 183 114 36.0 2e-24 MAKKEKGKKAVLPLDVIRKRRGYYRQVSDITSFLTHLALMAALVYVMFFVIFGIAPMKND DMKPKLSAGDLMLYYRLENKIFPSDVLVYQVEGKQYVGRVIGQPGDVIEIPEEGGLKING NTQVEDSIFFETKPYETETVKYPITLGTDEYFLMADMRSGAKDSRAFGAIHKKQIKGKVI TILRRSSL >gi|333758476|gb|AFIH01000001.1| GENE 186 194360 - 194545 252 61 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227874116|ref|ZP_03992322.1| ## NR: gi|227874116|ref|ZP_03992322.1| hypothetical protein HMPREF6123_2261 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_2261 [Oribacterium sinus F0268] # 1 60 1 60 61 97 71.0 3e-19 MKLQYVGDSFRDGLTDGKFYEGKAINMFCIALIDDSGIEKIYSRLNPGPFAGKVSGRWEI A >gi|333758476|gb|AFIH01000001.1| GENE 187 194665 - 195798 888 377 aa, chain + ## HITS:1 COG:no KEGG:Closa_4191 NR:ns ## KEGG: Closa_4191 # Name: not_defined # Def: SH3 type 3 domain protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 357 1 365 377 99 31.0 3e-19 MAERENTVWGEIRVQLSDVQNFLLNGQYKEAVILDKEILTLLVRMQIDQALMVSSSLEGD INQLFEGGVISAQARDTYHGIRAFGELAELGNETSAQDANDSFSMLRDALSSYVDENQEG RREESTAPRVNPNSYGEEAPRLRTDGYSERRVSSTIAQEEDDGGLGIPIRRNNGRTAKAS SASGRTVAGQRSGNVKRRMSGRSGSVQRKGRKTAGQEIDLYNILKIALPVAILLVVVLII RMIAFPKRKTPVMTTAAVSTTAETAESIETESSTEESTEAAKRYFVTTGVRVRTKPSTTD SEVLTVLEAGTEVDFKSDYNDEWISINYNGQEAYVAKQYVRSETVETTAASTTKSNTEQS SSSASNRDGSTTLTVAP >gi|333758476|gb|AFIH01000001.1| GENE 188 196001 - 196687 776 228 aa, chain + ## HITS:1 COG:CAC2871 KEGG:ns NR:ns ## COG: CAC2871 COG0356 # Protein_GI_number: 15896125 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit a # Organism: Clostridium acetobutylicum # 11 228 2 220 221 132 35.0 6e-31 MEKLARSLLEELNVETAFTIPLFGGIPVSESVFVTWIVMAILILAAFLLGRNLRVRNPGR RQQIAELIVTKLDAFTKGTLGEEATEYSTYMASVLLFIGFVNLTGIFGMKPPTKDLNIPA ALAVMSIVLVEAAGIRAFGLGGWMKRFAKPMAILTPINILEIFIRPLSLCMRLFGNVLGA FVIMELVTLVVPVGVPAILSLYFDVFDGLIQAYVFVFLTSLYIAEAVE >gi|333758476|gb|AFIH01000001.1| GENE 189 196853 - 197068 328 71 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227874110|ref|ZP_03992316.1| ## NR: gi|227874110|ref|ZP_03992316.1| F family two-sector ATPase, F(0) subunit C [Oribacterium sinus F0268] F family two-sector ATPase, F(0) subunit C [Oribacterium sinus F0268] # 17 71 17 71 71 67 96.0 5e-10 MTAIGAAIAALACIGAGLSIGIATGKATEAVARQPEASSKIMTILLLGCALAEATAIYGF VIGLMIILFLK >gi|333758476|gb|AFIH01000001.1| GENE 190 197105 - 197296 291 63 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227874109|ref|ZP_03992315.1| ## NR: gi|227874109|ref|ZP_03992315.1| F-ATPase superfamily proton( H+)- or sodium (Na+)-translocating F family ATPase epsilon subunit subunit B [Oribacterium sinus F0268] F-ATPase superfamily proton( H+)- or sodium (Na+)-translocating F family ATPase epsilon subunit subunit B [Oribacterium sinus F0268] # 1 63 1 63 162 82 73.0 8e-15 MLSLDLRTFIFTVINVLVLVFFLYRFLFKPVREILAARQNELDNSYREAEEANQKANALK KQY >gi|333758476|gb|AFIH01000001.1| GENE 191 197303 - 197593 372 96 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227874109|ref|ZP_03992315.1| ## NR: gi|227874109|ref|ZP_03992315.1| F-ATPase superfamily proton( H+)- or sodium (Na+)-translocating F family ATPase epsilon subunit subunit B [Oribacterium sinus F0268] F-ATPase superfamily proton( H+)- or sodium (Na+)-translocating F family ATPase epsilon subunit subunit B [Oribacterium sinus F0268] # 1 95 67 161 162 109 91.0 9e-23 MAQVDAERQEKLEKTRLQATSEYDEIIGNAREKATKIIADAKIEAQRQAEQKQHEMEEEV AMLVAKAAYKIAASKDSVENNQKLYDTFLEDAEKKG >gi|333758476|gb|AFIH01000001.1| GENE 192 197600 - 199621 2227 673 aa, chain + ## HITS:1 COG:CAC2867 KEGG:ns NR:ns ## COG: CAC2867 COG0056 # Protein_GI_number: 15896121 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, alpha subunit # Organism: Clostridium acetobutylicum # 174 672 6 505 505 554 56.0 1e-157 MLQKVSDYAQQLYKMHVPNSEIEETSRIFEVLPETASQLSDPTVPLENRLAIIDSIFPTE VRDILKVLCQNGLLSSWMDIADEYQRVSEEEATKLRVRLRYVTKPEEEQLKRIRTFVYNK YHTRNIEMRLEEDASLGGGFILEVGNDQYDWSTKGRRQQFLDEVMSKRLGGSSQDILSIL QSSVDDFDLKAEKKEIGFVSSVGDGIVVINGLDHAMYGEVVVFDNGVRGMVQNIERNRIG VILFGDEEGIVEGSRAVRTNKMAGIPVGDAFLGRVVDALGNPIDGEGEIVTRDYRPIEQP APGIIDRKTVNVPLQTGILAIDSMFPIGRGQRELIIGDRQTGKTSIAMDTILNQKGKNCL CIYVAIGQKESTIAALVENLKKHDAMSYTCVLAATAADPAPIQYIAPYAATSLAEYFMYE GKDVLIVYDDLSKHAVAYRALSLLLGRAPGREAYPGDVFYLHSRLLERSCRLSDELGGGS ITALPIIETQDGDVSAYIPTNVISITDGQIFLESNLFFEGQRPAVNVGLSVSRVGGAAQT KAMKKAAGSLRIDLAQYREMAVFTQFSSDLDESTKTQLTQGAILMELLKQPLGRPLSLGE QVVTLVLALHKEFLDVDKKEVKSLQNRILQYFEEKEPEILRNIEISGMLADDLVEQIISV YHDFRKKEAEEQS >gi|333758476|gb|AFIH01000001.1| GENE 193 199634 - 200539 874 301 aa, chain + ## HITS:1 COG:BS_atpG KEGG:ns NR:ns ## COG: BS_atpG COG0224 # Protein_GI_number: 16080735 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, gamma subunit # Organism: Bacillus subtilis # 1 292 1 285 287 160 34.0 2e-39 MPTTRELRDRIGSIDNTMKITNAMYLISSTKMRKAKAELAQTEPYFYTLQSMIARVMRHL PEDYTHPFLDSREGTAEGEGKVAIICVTADKGLAGAYNHNVIKETEELLKQYKNTRLFVV GEMGRSYFHTRRIPIDETFRYTAQNPTLHRARVITRRMLELFQNREIDELHIAYTRMKSS LEMESLEEQLLPLDKLHPVFVKVPITANYEAFRIFPNPDALMENIIPDYLNGYIYSALVE SFCAEQHARMTAMDSANRNGNELKQKLRIQYNRVRQAQITQEITEIAAGAKAQRAAKARK K >gi|333758476|gb|AFIH01000001.1| GENE 194 200559 - 201950 1495 463 aa, chain + ## HITS:1 COG:BH3754 KEGG:ns NR:ns ## COG: BH3754 COG0055 # Protein_GI_number: 15616316 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, beta subunit # Organism: Bacillus halodurans # 1 461 1 469 470 608 68.0 1e-174 MQTGKIVQVMGPVVDVEFMENPLPTIKTALTVDNHGVKSTMEVADHLGDNTVRCIMLSPS EGLERDMEVQSTGRGIAVPVGEETLGRLFNVLGETIDRKDPITTEERWEIHRKPPAFTEQ SPVQEVLETGIKVIDLIAPYAKGGKVGLFGGAGVGKTVLIQELIRNVATEHGGYSIFTGV GERSREGNDLYNEMTESGVIKNTALVFGQMNESPGARMRVAETGLTMAEYFRDVQHKDVL LFIDNIFRFVQAGSEVSSLLGRMPSAVGYQPTLASEMGQLQERIASTKAGSVTSVQAVYV PADDLTDPAPATTFAHLDATTVLSRKIVEQGIYPAVDPLESSSRILEEDIVGKEHYETAQ SVLQILQKYKELQDIIAILGMEELSEEDKLLVYRARKIRNFLSQPFFVGEQFTGVAGRYV PLKETIEGFKAIIDGEMDQVPELAFFNVGNLDDVKKKAESLKN >gi|333758476|gb|AFIH01000001.1| GENE 195 201962 - 202387 470 141 aa, chain + ## HITS:1 COG:BH3753 KEGG:ns NR:ns ## COG: BH3753 COG0355 # Protein_GI_number: 15616315 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) # Organism: Bacillus halodurans # 13 134 8 129 133 68 31.0 4e-12 MMRGNEGLFSAKVIATNKVYYDDKLRYLNVRTLDGQIGFMAHHAPIVVAVEIGVLDAQKP DGSWVHVEVGKGILQFANNRLTLLVDTLETKEEMDIRRAEEAKERAEEELRQKQSYMEYK KSQAALARALGRLEFYKKTYL >gi|333758476|gb|AFIH01000001.1| GENE 196 202398 - 202505 191 35 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLSPKQKKSITAVIVLVLAALMVLGMVLTPLLGRM >gi|333758476|gb|AFIH01000001.1| GENE 197 202593 - 203303 484 236 aa, chain + ## HITS:1 COG:no KEGG:Closa_0352 NR:ns ## KEGG: Closa_0352 # Name: not_defined # Def: AIR synthase related protein domain protein # Organism: C.saccharolyticum # Pathway: not_defined # 111 231 68 191 192 67 32.0 4e-10 MNKEESQKKIEDLVLLGYPGLSGSRFLWEKGNALPFSERFQKEERKRIEDLPRLFWEEES LSFSAENIYLFTDKERNGEPVPLYEDDVRAKENAGEIKRGKVEDLFPGFVEEFSVTEVLP LGKGGILSGLGEIGGGGFSFSYRKISFLQSTIELCEHFQISPYALHSKGAFLLRLEKGED FACLAREKGIEASCIGRFHAEKKRIRKDEYGESYLYKQETDSLEEIFTKEEIEIPT >gi|333758476|gb|AFIH01000001.1| GENE 198 203497 - 203979 568 160 aa, chain + ## HITS:1 COG:BH3351 KEGG:ns NR:ns ## COG: BH3351 COG1522 # Protein_GI_number: 15615913 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus halodurans # 5 160 8 164 164 145 48.0 3e-35 MRERILNIIEKNAKLSTEDIAALLGEDRERVAAEVAAMEKDGTICGYHALINWDNTKDER VDALIEVKVTPQRGMGFDSIAERIYQYEEVDALYLMSGGYDFTVMIKGRTMKEVANFVSM KLGPMESVLSTATHFVLKRYKDHGTRLSVAKSDERMQVSP >gi|333758476|gb|AFIH01000001.1| GENE 199 203976 - 205145 1013 389 aa, chain + ## HITS:1 COG:BH3350 KEGG:ns NR:ns ## COG: BH3350 COG0436 # Protein_GI_number: 15615912 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Bacillus halodurans # 5 384 11 390 393 450 57.0 1e-126 MMRELNPEVLAIKPSGIRKFFDLVSEMKDAISLGVGEPDFDTPWHIREEGIHSLEKGRTF YSSNAGLMELREEVSRKVESQHGISYNAKNEVMITVGGSEAIDLAMRVILLPGDEVLIPE PCYVSYLPCARMAYGVPVPIPLEEKDEFRLTAEKLEAAITEKSKLLILPFPNNPTGSIME KEDLEAIVPLILKHNLYVLTDEIYASLSYKGKHHSIIEFPGMRERTVYINGFSKAYAMTG WRLGYACAEERILKQMLKLHQFAIMCAPTTSQYSAIEALRNGDADVERMREAYDERRRFL LYNFRKIGLDCFEPYGAFYVFPSIKKFGLSSTEFAERLLKEEKVAVVPGTAFGDSGEGFI RISYAYSLENLKIAMERIERFIQKLEVKA >gi|333758476|gb|AFIH01000001.1| GENE 200 205162 - 206469 933 435 aa, chain + ## HITS:1 COG:CAC2686 KEGG:ns NR:ns ## COG: CAC2686 COG0366 # Protein_GI_number: 15895944 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Clostridium acetobutylicum # 1 434 1 449 451 239 30.0 7e-63 MAWYDGAIFYHILPGGMFPETKTEKSSFLRLEEHLPYLKVLGVDAVILGPLFSEDPLCYG AKDFTKINPALGTEEELCHYINLAHNMGLRVLFDEAVLFSSRAFFAFRDLLEKGEKSPYK SWYKDVDFTASSEGGDAFSYSSWKELENYPLFNFDDEDLRMYIVERIKEWISRYDIDGIR LAHCTSMDIHFQKSLRYFTGQMKPEFFLLGDIKKGELARYINAETLQSVCNYDVYRAIVK AFNEKNFYELVSGLGKNPELLLQSNTFLENPRTDRIATVLEDRNNLYGVYTALFALPGRV ALYYGAEYGLSGTKEEDEEALLSPSFTKAEYTPDAFTSYIAKLAEIHGKNSELQNGGYKE IYLDHRLYAFLRTDENSGVLTVLNNDSMDQFIRLRIPLRARLAFDLVNQDEVEIGDDGKL RVFCPAHSGRLIKVK >gi|333758476|gb|AFIH01000001.1| GENE 201 206625 - 207065 427 146 aa, chain + ## HITS:1 COG:CT866 KEGG:ns NR:ns ## COG: CT866 COG0296 # Protein_GI_number: 15605602 # Func_class: G Carbohydrate transport and metabolism # Function: 1,4-alpha-glucan branching enzyme # Organism: Chlamydia trachomatis # 4 141 99 235 738 125 43.0 2e-29 MDRFFSELDRYLFGVGRHYQIYEKMGAHPCTFEGKEGVHFAVWAPHAKAVSLVSDRNGWN PEANPMIRVEDSGIFECFVPDMGENELYKYAILTQKDEWIYKADPYGFFSEFRPGTASVT TDLTNFSWNDKAWMEARKKKTWMKAP >gi|333758476|gb|AFIH01000001.1| GENE 202 207047 - 208753 1119 568 aa, chain + ## HITS:1 COG:YPO3942 KEGG:ns NR:ns ## COG: YPO3942 COG0296 # Protein_GI_number: 16124070 # Func_class: G Carbohydrate transport and metabolism # Function: 1,4-alpha-glucan branching enzyme # Organism: Yersinia pestis # 4 475 241 671 727 478 50.0 1e-134 MDESPMMIYEVHLGSWKREGNPERNGFISYQKAGRDLAEYCNYMGYTHVELMGIAEHPFD GSWGYQVTGYYAPTSRHGSPKDFMEMVDILHEAGIGVILDWVPAHFPKDAHGLADFDGEA CYEHPDSRLGEHPDWGTKIFNYGKTEVENFLIANALYWYELYHIDGLRVDAVASMLYLDY GRRDGEWLPNRFGGNGNLEAIEFFKHLNSIIRKREDGSMIIAEESTAWPNITKSPEEGGL GFHFKWNMGWMHDFLAYMKENPLYRSYHHNQMTFGMSYAYSEKFILVLSHDEVVHLKRSM IEKMPGIEEERFQNLKAGYFFMLGHAGKKLLFMGQDFGQYSEWSEARSIDWYLLEEKENR SLHNFMRDLLHLYREYPAFYEADYEYEGFSWVNADDSSRSIYSFIRNRKNHFVIGKSGEK AAGKNNGKETETGEIIESKGTDGKGLNRKGHEESLLFVVNMTPVERADYWVGMPKSKEVK LLFTEEGKVKEEKYFPVVKGECDGRNYHLAYPLKGYGIALFSFVEEEEDREANTKPCPEE DSIEKKGRDERKEKTRQGELVAKNSRTA >gi|333758476|gb|AFIH01000001.1| GENE 203 208692 - 209735 1004 347 aa, chain + ## HITS:1 COG:SA0380 KEGG:ns NR:ns ## COG: SA0380 COG3759 # Protein_GI_number: 15926097 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Staphylococcus aureus N315 # 228 344 2 118 119 104 45.0 3e-22 MKGKRRHGRGNWWLKILGQHKKSTEKEKFFRSALAVLAVFFTFALLIFLYRKQNVYRWHF PKTVLQHREMLERVAKEKGLSSDLEVLYAIMNVESGGRLRDVMQSSESMGLPVNTLDTED SIEQGLSYYKELKEKTRELSLDDKSLWQAYNYGIGFLYYVKKHGGQYQDSLAEDFAMEQS GGKLVAYKNKLAIAENGGYRYQYGNMFYARLIEENILRNREKNKMEFSIVNKILMTVSGV LFLYIMLLETFMTDSESTARVFKMTVRDLRGKNLNTLFKNQGIYNGLLGIALLYGTYRPG GNIELSVVILSMMFLVAVYGGLSSDKSILLKQGGLPFLSLVSLFLRW >gi|333758476|gb|AFIH01000001.1| GENE 204 209761 - 209871 87 36 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQKTNCYKKNDLVVLEITDLTEEGQGVGKCDGLVFS >gi|333758476|gb|AFIH01000001.1| GENE 205 209883 - 211409 1021 508 aa, chain + ## HITS:1 COG:CAC0523 KEGG:ns NR:ns ## COG: CAC0523 COG2265 # Protein_GI_number: 15893813 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Clostridium acetobutylicum # 2 505 43 457 460 363 42.0 1e-100 MGDVVEAKILKVKKNYAYAKVEKLLEASPYRVTPFCPVAGKCGGCQLQHLSYEKELEWKE DRIAQSLIRIAGIPEEEVHAKGEGILGGKTERYRNKAQYPVQNGRGIREEKTVGERVFEE GKKGSEKEQDSYNSLHIGFYGFHSHRIIETEDCLINSAENSLILRCIKNWAREYQISGYE EETGKGLLRHIFLRKGFSTGEILLCLVLNGKSLPHGKELWEKLRGLSFRAEAGGLQSEVD ISREMDAESRAELHCGVDTQSEAEVHCGENKKIPSKIVGLCVNINEGHGNAILGRETLCL YGKDNIEDKIGELSFSISVPSFYQVNPVQTEKIYGKALEYAALTGEETVWDCYCGIGTIS LFLAQKAKQVYGLEIVPEAIENAKKNAEKNGLYNTEFYVGAAEEVLPKWVEEQKRELSAK GADCGIGDLVDVVSLDPPRKGCDEACLSAVLELSPKRIVYVSCDPGSLARDIKYLGEGGY KLEKWVGIDNFPRTGHVETIALLQKEES >gi|333758476|gb|AFIH01000001.1| GENE 206 211568 - 211852 143 94 aa, chain + ## HITS:1 COG:no KEGG:CD0408A NR:ns ## KEGG: CD0408A # Name: not_defined # Def: hypothetical protein # Organism: C.difficile # Pathway: not_defined # 2 94 1 93 93 82 70.0 4e-15 MLRWIIKILLFPISLLLSILIAFLTFLLSIGTVLLYFLMILCVVGAIASFIQNKTILGIE ALFLGFLFSPYGIPMLGASIIAFLHVVNKGIKSI >gi|333758476|gb|AFIH01000001.1| GENE 207 211940 - 212716 528 258 aa, chain + ## HITS:1 COG:no KEGG:SDEG_1349 NR:ns ## KEGG: SDEG_1349 # Name: not_defined # Def: hypothetical protein # Organism: S.dysgalactiae # Pathway: not_defined # 1 258 1 259 259 363 74.0 3e-99 MDFDYFYNREAEGFNFLKVPEILVEGEEFQGLSAEAILLYAMLLKRAGMSYKNNWLDKQN RVFIYFTVEEIMKKRHLSKPTAIKLLDELDKKNGIGLIERVRVGLGKPNIIYVKDFLSMV QEKSVVQKFKPLTSEVKNIDLRSKGNELQDVKSLNPNYIDRSNSNNRKREYSFLENGLGS FQNVFLQEKDRAELELLLNGQLNNYIERLSAYLKSSGKTYKDHKSTILSWFYKDQGNRRC IKASNIPSLEEYDKGEHL >gi|333758476|gb|AFIH01000001.1| GENE 208 212716 - 213564 547 282 aa, chain + ## HITS:1 COG:CAC1933 KEGG:ns NR:ns ## COG: CAC1933 COG1484 # Protein_GI_number: 15895206 # Func_class: L Replication, recombination and repair # Function: DNA replication protein # Organism: Clostridium acetobutylicum # 40 267 36 273 282 107 30.0 2e-23 MSEMKRTWIEGVEYSYDANEEYEKDGHIYCKTCHERKDGKILEFFGGKMICRIACHCDKQ REEKEVERQKQLEIERLKSSCFSSRAEWEYSFENYQGEENQSLLIAKNFVKDYEQMKKEN VGLLFYGSVGSGKTYLACSIANALIEQYQITVKIRNFSQIMNEMQKCGFDFDKNAYIESL VNTSVLILDDLGIERDTSYAKEQVYNIVNSRYLRRKPTIFTTNLSYDTIQNCIESVEYQR IYSRIIEMCIPIMVVGQDYRKQIQKEKLSRNKERLLSGGERT >gi|333758476|gb|AFIH01000001.1| GENE 209 213561 - 214046 495 161 aa, chain + ## HITS:1 COG:no KEGG:SEQ_0732 NR:ns ## KEGG: SEQ_0732 # Name: not_defined # Def: hypothetical protein # Organism: S.equi_equi # Pathway: not_defined # 1 161 1 161 161 133 73.0 2e-30 MINEEVSDKTLNLEIKAAKITAKLIIQQIKKLLKEAKKFGGMEKFVGEKGNEVKLKDLVQ KGQLEEIAIGETELKSLKKELNKYGVKFSVMKDKKTKQYSLFFQAKDVKIMDKAFKKVLA DLEKKTERKESIHKNLEKFKEMVKNIIFKDKIKNKQKEQSL >gi|333758476|gb|AFIH01000001.1| GENE 210 214043 - 214381 297 112 aa, chain + ## HITS:1 COG:no KEGG:CD0412 NR:ns ## KEGG: CD0412 # Name: not_defined # Def: putative conjugal transfer protein # Organism: C.difficile # Pathway: not_defined # 1 110 1 110 594 204 89.0 1e-51 MIDKILKDIKGLFKVQDKVKFLKQNIPYLAFFYLGNIFSNHVRSYVGGDVIDKIFQGILE LNTMSFLPSIHPADILIGIGVAALIKFIVYTKGKNAKKFRQGKEYGSARWVA >gi|333758476|gb|AFIH01000001.1| GENE 211 214432 - 216270 1333 612 aa, chain + ## HITS:1 COG:lin1623 KEGG:ns NR:ns ## COG: lin1623 COG1961 # Protein_GI_number: 16800691 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Listeria innocua # 1 303 1 299 301 250 46.0 7e-66 MMEYATKITALYSRLSVGDEDRDGGESNSIVNQKAFLERYARQNKLMNIRHYIDDDESGR FFDRSAYTQMISDVESGKIGIVIMKDMTRWGRDYLQVGNAMEIFRRNNVRFIAINNGIDS QDQNTLEFAPFINIMSEWYARDISKKVKTGIKTKGASGKPVATEAPYGYIKDPNNKDFWI VDKEAAEVVKLIFRLFMDGKNRNQIAVYLKEKEILTPTFYMKQQDRGTAKNRKLNEENRY NWNKATLTHILKRQEYCGDVVNFKTEKHYKDKRNHYVDKDKWQVIKNVHEPIIDRATYEN VQRRLKNAPVKRPNGDGEIHALSGLMYCKDCGTKMHIRTIHKSGKVQHVTYCSEYAKGKS KHPKCHSPHRIDVDDVMETITEVLRKIAQYSLANKEEFEALVKSSLAKEQTEEIKKQKKR IPQIKDRMEQIERVMNKLYEDNALGNIEPKRYEQLSGKYAEEYYSLKAEQEQIEERLSEF ENANQRAKNFIKLAESYSDFEELTPTAINEFISKIVVHERDVKRAKYAVQRIEVYFNYIG KFENELTKEIEPTEQEMIQMREEIEEAKKEKTRAYHRAYSKEYRSKNIDKFREYERIKAR EYRARKKLQAVT >gi|333758476|gb|AFIH01000001.1| GENE 212 216351 - 216533 142 60 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|315650967|ref|ZP_07904006.1| ## NR: gi|315650967|ref|ZP_07904006.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986] conserved hypothetical protein [Eubacterium saburreum DSM 3986] # 1 60 1 60 60 65 88.0 1e-09 MTEKQEAQTKDERAMSRKPDGILIKKIRGKTFVSEIYFDKESKDTFQDRLLKIVQAERKE >gi|333758476|gb|AFIH01000001.1| GENE 213 216703 - 217320 172 205 aa, chain + ## HITS:1 COG:no KEGG:SmuNN2025_0027 NR:ns ## KEGG: SmuNN2025_0027 # Name: not_defined # Def: hypothetical protein # Organism: S.mutans_NN2025 # Pathway: not_defined # 1 204 1 204 206 310 81.0 2e-83 MKEYIGSLEKEFSLIENGFKEEEKRALNDYKSNDKEYVKKLAFLAYKSHTYQVRMYGVFL FGYLSEQNDILAFMRDEVSKDDNWRVQEVLAKAFDEFCKKTGYEKALPIIDEWLENNNSN TRRAVTEGLRIWTSRPYFKDNPNEAIRRIANLKEDASEYVRKSVGNALRDISKKFPELIK VELNNWKLESKEINQVYKLASKLIS >gi|333758476|gb|AFIH01000001.1| GENE 214 217449 - 217769 228 106 aa, chain + ## HITS:1 COG:no KEGG:SDEG_1343 NR:ns ## KEGG: SDEG_1343 # Name: not_defined # Def: hypothetical protein # Organism: S.dysgalactiae # Pathway: not_defined # 1 106 1 106 106 98 86.0 6e-20 MKNIDEKILMAEEEIKQLQNKRKKLISQQKQEERKKRDRRIYEKGGVFESIFTESKDFTK DEFYQLITFPNIKEEVNQKILKIIEKRGQGENQNTEMQEEVTGTEE >gi|333758476|gb|AFIH01000001.1| GENE 215 218013 - 219473 756 486 aa, chain + ## HITS:1 COG:AGl66 KEGG:ns NR:ns ## COG: AGl66 COG0507 # Protein_GI_number: 15890136 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 261 12 261 1277 175 37.0 1e-43 MAIYHLCIKIISRGKGKSAVAASAYRSGEKIKNEYDGIVHDFTRKGGIAHTEILLPQNAP QEFSDRGTLWNSVEKIEKSKNSQLAREIEVALPKELDREKQINLVREYVKENFVKVGMCA DIAIHDKNDGNPHCHILLTMRPLNEDTTWGAKSKKEYILDENGEKVKLKNGNYKTRKINT TDWNEQDKAEEWRKAWADITNKYLEENSIQEKVDHRSYLRQGIEQIPTIHLGVSATQMEK KGISTDRGYINREIIHQNKILKEISRRIKALLNWIRGIGKEENTENENTKFTLPLKENLQ SIFENLIRENADKNNADLEKYIESYQLLKDKNITSLSQLKESIVTLRDKNYKTTRALKDT EKKVDDKTKLIDQSEKYLKHKDTYKAYTKTKKSKQGNFYNEHTAEIILFESAKKYLKDHL GESKTLAISKWKSELATLKKEKKNLYSQILEIREEVEQAEKVKTCIEQIEGHEKRLSQVK RNELDL >gi|333758476|gb|AFIH01000001.1| GENE 216 219480 - 220532 535 350 aa, chain + ## HITS:1 COG:YPO2151 KEGG:ns NR:ns ## COG: YPO2151 COG0697 # Protein_GI_number: 16122384 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Yersinia pestis # 27 347 16 348 373 158 31.0 2e-38 MKKWYNIKKDRKGALTLSKNKTATFFAILAAALYAINVPISKILLANVSPTMLAGFLYLG AGVGIGILLGIKKTQNKLTDEKWLNINDLPYTIAMVVLDIAAPIFLMFGIANTNSANVSL INNFEIVATSVIALLIFKEKISKRLWIAIVLVLLSSVILSFEGMEALALNKGSMFVLCAC ICWGIENNCTRSISDKSSEEIVLIKGIFSGIGSIVIAFIIGEHLPEILYILAVMLLGFVA YGLSINFYIMAQKNLGAAKTSAFYSIAPFLGVGFSFIILGERPTVKFYIALGIMIISTLI MIKDTLGNEKIYNGYVHTHQHKHGKVVHSHEHRHFIFNPMHIHSHSHANT >gi|333758476|gb|AFIH01000001.1| GENE 217 220784 - 221416 537 210 aa, chain + ## HITS:1 COG:CAC1969 KEGG:ns NR:ns ## COG: CAC1969 COG3505 # Protein_GI_number: 15895240 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirD4 components # Organism: Clostridium acetobutylicum # 13 191 157 326 591 110 35.0 1e-24 MNGRPSNPKYARNKNVLVIGGSGSGKTRFYVKPNLMQMHSSYCVTDPKGTIVLECGKMLE DNGYEIRILNTINFKKSMKYNPFSYIHSEKDILKLVQTIIANTKGEGEKAGEDFWVKAEK LYYTALIAYIYYEAPKEEKNFATLLDMIDASEVREDDENYKNPIDRLFEALEKKEPRHFA VKQYKKYKLAAGVIELRRTLHHYLSEKCFA >gi|333758476|gb|AFIH01000001.1| GENE 218 221457 - 223304 776 615 aa, chain + ## HITS:1 COG:lin1623 KEGG:ns NR:ns ## COG: lin1623 COG1961 # Protein_GI_number: 16800691 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Listeria innocua # 5 299 6 301 301 321 56.0 3e-87 MRNYEKITALYERLSRDDELQGESNSIVNQKKILEEYAKKNHLENIIHFTDDGISGTQFD RPGFMAMMNGVNQGNIGCIIVKDMSRLGRDYLKVGQCMEILRQKGVRLIAINDNVDSFYK DDDFTPFRNIMNEWYARDTSRKIKSTFKAKGESGKHTGSSPPYGYIKDKDDKNQWIIDEK AAEVVRRIFHLTMDGKGPYAIARILETDKIDIPAYHQQKLGYGLHQSKVFEYPYRWCSST IASILKKQEYLGHTVNFKTRKHFKDKKSKYVSEDNWLIFENTHEPIIDQETFDNVQRIRG NVKRYPDGWGEYHPLTGLMYCADCGSKMYVHRTSNYKNIPYYTCSAYTKVPCGTLCPSAH RIKAEVVLNLIQSTLQDIKKSLDEDNEAFLHSIQNEMEESEKMEMEKKKTRLTDSTNRLQ ELERLMCRIYEDMILEKIPNNRYEILNNQYETEQRELSKEIDGLEKAIKRYEKETDRAKK FIRLIERYDNFDELTPTIINEFVEKILIHERDRKGSQTANQKVEIYFNFIGNYEPPKEEL SEEEMQKLREEEEKERERKDRLHQNYLNRKANGKQKEYEDRYKEKREQLKQEKLKTLKKS GIPLSEYKELMKKEA >gi|333758476|gb|AFIH01000001.1| GENE 219 223353 - 223556 130 67 aa, chain - ## HITS:1 COG:no KEGG:ELI_4486 NR:ns ## KEGG: ELI_4486 # Name: not_defined # Def: transcriptional regulator # Organism: E.limosum # Pathway: not_defined # 1 60 57 116 116 63 56.0 3e-09 MLIKDIQHYSELRYVGSITMPERLQILQLHRNYVLEQQLKWTEYLQNLDDKIEFYQQSIK NMTKHNL >gi|333758476|gb|AFIH01000001.1| GENE 220 223640 - 223723 76 27 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKIGEIANKTNLPASTLRYYEKKDYSK >gi|333758476|gb|AFIH01000001.1| GENE 221 223835 - 224242 160 135 aa, chain + ## HITS:1 COG:L35675 KEGG:ns NR:ns ## COG: L35675 COG0599 # Protein_GI_number: 15673958 # Func_class: S Function unknown # Function: Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit # Organism: Lactococcus lactis # 7 123 5 121 122 148 61.0 2e-36 MKSKRFEIGLEQLQEIDGVSGEKVIQTLEDIAPDLGEYIIEFAFGDIYSRQGLSLQEREM ITITSLLTLGGCEPQLEVHINGSLNVGISPEKIIETFIQCIPYVGFPKVLNATFVAKKIF SERNLTLGSNTNDGR >gi|333758476|gb|AFIH01000001.1| GENE 222 224428 - 224844 363 138 aa, chain + ## HITS:1 COG:no KEGG:FMG_0975 NR:ns ## KEGG: FMG_0975 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 1 138 1 138 138 167 68.0 9e-41 MDKKEYLLYVKGKAVKVNEEIYRAYWRITEHEKYLQRKDWKYNVLPFSIFDYDGHFIDNI VDESIDIEKIVEVKMQIEELNKALNSLTEEERDIITAIFFRDESLRSIGERKNRSYQAIG KRRDKILEKLRKLLEGKI >gi|333758476|gb|AFIH01000001.1| GENE 223 224913 - 225179 158 88 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|331001941|ref|ZP_08325461.1| ## NR: gi|331001941|ref|ZP_08325461.1| hypothetical protein HMPREF0491_00323 [Lachnospiraceae oral taxon 107 str. F0167] hypothetical protein HMPREF0491_00323 [Lachnospiraceae oral taxon 107 str. F0167] # 1 87 1 87 88 89 96.0 1e-16 MKDNRTELQKVKSEIELKENELEKYEKKLVQLKNQEKKIRKQASLEERKKRNHRLIERGA ILESFIEGASEKSNQEIKAILQRTFQKR >gi|333758476|gb|AFIH01000001.1| GENE 224 225493 - 225609 125 38 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDYPRRKPLRPTPKTTKEKNKDNLKAKGVDKSGRQFSL >gi|333758476|gb|AFIH01000001.1| GENE 225 225587 - 227221 1209 544 aa, chain + ## HITS:1 COG:AGpT237 KEGG:ns NR:ns ## COG: AGpT237 COG0507 # Protein_GI_number: 16119945 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 6 263 22 284 1117 162 40.0 1e-39 MADSFHFNISIISRGKGKSAVASAAYISCEKLTNEWDGVTHDYHNKKGLEHKEIFLPENA PKEFLDRSILWNSVELNEKAINAQLARNFIIALPKELSLEENKDLIREFIQENFVSKGMI ADLAIHQGNDEGNGNIHAHIMTTVRPLNQDGTWGAKSKKEYLLDEQGKKILGKNGKPKTR KIDLTDWNNKENAEKWREHFATLCNQYLETAGEQKRVDHRSYKRQGKEEIPTIHLGASAG ALERKGVETEKGNINREIKKHNSIVKAVRERIAEITSWLNDFTKVLFDKYEQYKQEKKEE YENKAELFNLYEYISIYYDLQGEKARKLNPYASNKKIGADLRRFSKARIYLKDNNLKTIA ELQEKISTLQSKNKKISQDIKAKTTRIENLNKCFAYADIIKDNKQVFEEWNSKSLFKDSF YNSHKDEIDKYKRARAILEKITGLSAIKIKDWKKEIQSLESEILKLNIQSQKVKEEYESI NHIKYAVKTVNDDYGIDLSIEIDKAIKRGEKPSVIAQIKKYQEQQEAYEKRKDKTKDYYR KEER >gi|333758476|gb|AFIH01000001.1| GENE 226 227307 - 227858 299 183 aa, chain + ## HITS:1 COG:no KEGG:FMG_0972 NR:ns ## KEGG: FMG_0972 # Name: not_defined # Def: putative replisome organizer # Organism: F.magna # Pathway: not_defined # 1 155 1 155 237 297 98.0 1e-79 MADKRMFSLKIVDSDLFLDMPLSSQCLYFHLSMRADDDGFVNNPKKIIKIIGANEDDLKI LIAKGFVIVFERGIIVITHWKINNFIRKDRYKPTLYENEVQSLSQTKNGMYIKEVGCHLV DQRLTSGQPSIDKGRLDKVSIDKGREESTPPPNSKNMENIKTLSLQTNNTRHYKKSYKVI PTR >gi|333758476|gb|AFIH01000001.1| GENE 227 228194 - 229309 413 371 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167855185|ref|ZP_02477956.1| 50S ribosomal protein L31 [Haemophilus parasuis 29755] # 18 365 9 328 339 163 31 3e-38 MDNKELSITSDSEYKKLLSELKEKVRSSQLKAAIKVNYLLLDLYWTLGEYIVKNQEQHSW GDAFIKSLAKDLQKEFPDMKGFSETNIKYIRRWYSFYIKGLQGVAEIENNDSNSKGLQPV AQFDERVINHIKQIPWGHNQRIINKCKTIDEAIYYVDKTIENGWSRNVLVHQIESGLYGR EGKSITNFEKRLPALQSDLARQTLKDPYNFDFLTIREGYDERELQKELVDKISDFLLELG EGFAYIGKEYHININGDDFYIDLLFYNLKLHSYIVIELKAEKFKPEHLGQLNFYVTAVNR ELKTDRDNATIGLLICKDKNDVVCEYSLEQISQPIGISKYKITKLLEAEYKSSLPSIEEI EKKIKEIDTDN >gi|333758476|gb|AFIH01000001.1| GENE 228 229398 - 229583 119 61 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|291166216|gb|EFE28262.1| ## NR: gi|291166216|gb|EFE28262.1| hypothetical protein HMPREF0389_00177 [Filifactor alocis ATCC 35896] # 1 61 1 61 61 68 100.0 2e-10 MQEKRNEQTTGTKTIKKIGKTTYEVIVHFNDKSSETMQDKLKRIMLREFRRKSDEKKDDF D >gi|333758476|gb|AFIH01000001.1| GENE 229 229685 - 230404 571 239 aa, chain + ## HITS:1 COG:CAC1969 KEGG:ns NR:ns ## COG: CAC1969 COG3505 # Protein_GI_number: 15895240 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirD4 components # Organism: Clostridium acetobutylicum # 2 207 354 562 591 116 37.0 4e-26 MSEDELELDCIGDRKTALFVIISDTDDTFNFVVSIMYSQLFNLLCDKADDVYGGRLPVHV RFLLDEFANIGLIPKFEKLIATIRSREISASIILQAQSQLKAIYKDNADTIIGNCDSTLF LGGKEKTTLKELSETLGKETIDLYNISETKSNQNSFAMNYQKTGKDLMSQDEITVMDGGK CIFQLRGVRPFFSDKFDITKHKNYKFLEDYDKKNVFDIEEYIKRKGEVKLNRNTVITRL >gi|333758476|gb|AFIH01000001.1| GENE 230 230417 - 230836 108 139 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTLQKMAGALKYELQTVSLFICMLYLFKKDIIQAEKWMHTYCQALDKEDENSCYYFCYEL MLHLKNQNSDDATIYNYLRNFFDENLVQMVFEDFRGNPFEALPTMHCQEPCDENCELYSY CITRTEKEIYRNIRSKVLT >gi|333758476|gb|AFIH01000001.1| GENE 231 230911 - 232704 1022 597 aa, chain + ## HITS:1 COG:CAC0661 KEGG:ns NR:ns ## COG: CAC0661 COG1132 # Protein_GI_number: 15893949 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Clostridium acetobutylicum # 18 596 28 608 627 226 28.0 1e-58 MILSKKQYTPWDNILIPYKSSELSTVLYSLIRLLEFIIPTIQIAVNALFIEKALSYLSGR SSREELLLPILMLSGIIVYARICKVLAALCMKHVQNGIRAQFHTAIIQKCARLTYESIEN KEIWELFQRINNKLEDRMTIGFQNSVELIGMGVQILGFLGALIFSAWWAAFIVVILSVPI MILGIKGGQKQYEAERETGKYKIRYEYLSDIMTNRDSARERSLFHYQERLILQWNKLFEK VKYLQRKVTINTMLRMKAVNLTVSLAMFMVDLILLLAVAKGKVSVGMFIALTQASIGIIS IMSWEFSDRIKEFATQREFFKDITHFASLPETEGATSEPAPPVPLQSIEFRHVTFRYPNT EKEVLRDLCLKMEPGRHYAVVGRNGAGKTTLTKLLTGLYTDYEGEILINNKSIKNYAASE LKSFFAVLFQDFSRYHISLRDNIAIGDIRNFGNPDTDRNIEKILDELNMTDNIRTLPDKM NTHLGKLDEKGVDFSGGQWQRLAIARVMLSPAPMYILDEPTAALDPMSESKIYGDFEYIS RQKTTLLITHRLGATKTADYILVLDDGHIVQQGSHATLMQYDGLYKDMYDSQRSWYQ >gi|333758476|gb|AFIH01000001.1| GENE 232 232701 - 234467 223 588 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 342 571 2 228 245 90 26 3e-16 MKKKYLVFRRMIFDMFRISPGMTTLYCLFDVLHAGGYILVMLCTEKLFDSVPLLAAGSPL SVSLRPLLFLIMATVFFEIANSLSNFHIEHLSPKILSHFYKRIYIKASHISPIDYERPEF LDMLNKALQGVEYGFFASSLILMVFTFYVPYFILLGVYLQHISPILILIVLLIFTPVILG QVIRFRLFSEAEDAIAPIRRATDYYEQVVCNRKFFKETRILGIVNHFMQLYQDGVILINQ KTLTAEKKHIRIDAALRLFTIGGYIGILLMLVNSLIQKVISPGAFSAVFASVNMMYALAE EMVTMFSGQITQYAVSIQNYHSFIDLPENAKEEGSFDKTKGITLDNVHFSYPNTQTETIR GISLKIQPGETVAIVGENGAGKSTLAKLMLGLYVPDRGTVRIGGLDSEKVASRCIYQNCA AVFQDYQHYLTTLEENITISSNNSCYNMLVRLNHVCERAKLLVNSDSFPQGFSTMLSREF GGVDLSGGQWQRIAIARGIFREHDIIVLDEPTSAIDPIEESLMYQNFKEISEGKTAIIIT HRLGAARIADRIIVLKDGIIDDIGTHEELINKGGVYSEMYRTQAQWYE >gi|333758476|gb|AFIH01000001.1| GENE 233 235252 - 235443 169 63 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVPMSFSPLAKIGETRSYTVKVSNEMMGIPGTVGTGLSFVAKKAAAQVVSKAIAAKLGAG FIP >gi|333758476|gb|AFIH01000001.1| GENE 234 235864 - 237129 543 421 aa, chain - ## HITS:1 COG:AF0152 KEGG:ns NR:ns ## COG: AF0152 COG2217 # Protein_GI_number: 11497769 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Archaeoglobus fulgidus # 3 413 273 689 690 337 45.0 3e-92 MLETGDQSFISQVQTLISQAQSQPSRAENIAQKVAGWLFYIAVIVALIAFVVWMIIGDIP TAVIFTITTLVIACPHALGLAIPLVTARSTSLGASRGLLVKDRQALEIAQDADVIILDKT GTLTTGEFKVLDVKLLNDKYTKEEIIALLSGIEGGSSHPIAQSIISFADEQGIRPASFDS IDVISGSGVEGKAGGHRYQLISQKAYGRNIDMDIPKGATLSVLVENDDAIGAVALGDELK PTSKELIKALKKNNIQPIMATGDNEKAAQGAAEDLGIEYRSNQSPQDKYELVKTLKDEGK KVIMVGDGVNDAPSLALADVGIAIGAGTQVALDSADVILTQSDPGDIESFIELAHKTTRK MKQNLFWGAGYNFIAIPLAAGILAPIGITLSPALGGILMSVSTVIVAINAMLLSLDPKNN D >gi|333758476|gb|AFIH01000001.1| GENE 235 237171 - 238154 812 327 aa, chain - ## HITS:1 COG:MA0166 KEGG:ns NR:ns ## COG: MA0166 COG2217 # Protein_GI_number: 20089064 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Methanosarcina acetivorans str.C2A # 18 322 1 311 764 180 37.0 4e-45 MNNDNRYSSHNHHDYDDMDKLKHEHGITDEHGDHKDKHQEHHAGHDHSGHSGHDHSGHDH SGHDHSGHDHSEHDHSGHDHSGHDHSEHDHSGHDHSGHDHSGHDHSGHNHSGHSGHAHHH HGSFKELFLKSLPLGIIIMLLSPMHGFELPFQFTFPYSDIVVAILSTILIIYGGRPFYQG AVDEFKQKEPGMMALVSLGLSVSYLYSIYAVIITYVTGEHVMDFFFEFASLLLIMLLGHW IEMKAIGEAGDAQAELAKLVPKDAHVVLEDDSIETRPVADLKVGDLIRVQAGENVPADGI IERGESRLNEALLTGESKAVKKALAMK >gi|333758476|gb|AFIH01000001.1| GENE 236 238174 - 238623 276 149 aa, chain - ## HITS:1 COG:SPy1717 KEGG:ns NR:ns ## COG: SPy1717 COG3682 # Protein_GI_number: 15675568 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Streptococcus pyogenes M1 GAS # 10 145 4 139 144 110 38.0 6e-25 MSTIEFKAFITDAEWEVMRVVWANDRVTSKKIISVLKEKMDWTPSTIKTILGRLVEKGVL NTEPEGRKFIYTANIEEKEAVRDYVEDIFNRICNKKVGNVIGSIIEDHVLSFDDIDRLEK ILEMKKSFAVEEVACNCPEGQCKCHLHHH >gi|333758476|gb|AFIH01000001.1| GENE 237 239117 - 239311 165 64 aa, chain - ## HITS:1 COG:no KEGG:GALLO_0261 NR:ns ## KEGG: GALLO_0261 # Name: not_defined # Def: replication initiation protein Rep # Organism: S.gallolyticus # Pathway: not_defined # 1 63 251 314 326 72 59.0 5e-12 MMIGQYLSDGYITSREIINVIERISYDSESPLAYLLKSLENLKEERRLEAKILAHRKAEM AFSE >gi|333758476|gb|AFIH01000001.1| GENE 238 239581 - 240045 340 154 aa, chain - ## HITS:1 COG:no KEGG:GALLO_0261 NR:ns ## KEGG: GALLO_0261 # Name: not_defined # Def: replication initiation protein Rep # Organism: S.gallolyticus # Pathway: not_defined # 7 154 6 152 326 147 55.0 1e-34 MENINLISVDEYQTSERFYALPKILFESDLYKEMRLDAKVFYAVLKDRLSLSFKNNWIDE DGYVFLVYSNSKLMDILNCSKSTLLRMKKELTQFGLIYDVQQSTTKTGNLENRIYLGQLK DNFLTQNNKKVEDSHVESRVVSNLYQEDVKITRG >gi|333758476|gb|AFIH01000001.1| GENE 239 240692 - 242134 745 480 aa, chain - ## HITS:1 COG:BMEII0580 KEGG:ns NR:ns ## COG: BMEII0580 COG2132 # Protein_GI_number: 17988925 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Putative multicopper oxidases # Organism: Brucella melitensis # 73 476 27 490 494 304 37.0 2e-82 MSKNKHMLLGIGLTVVLTAVGYITFLEPMISYFKINQSAVNIDIQTSKTKSTLPIPPLLE DKNPDPNIADFTLEPQEGETSFLPNTKTRTMGYNGSFLGPVIRVSKGEQVNMHVNNKLKE ATTVHWHGLEVEGEKDGGPHQGIEPGTTWGPSFTVNQQAATLWYHPHFGGNTATQVYKGL AGLFYVDDEVSKSLNIPKEYGVNDIPLVIQDRSFGKDGSFIYNTNMMDGATGDTIIVNGA IKPNLEVNRVKMRFRIVNGANASNFNLKLDNRDGFYQIASDGGFLEKPVSKRNIMLSPGE RAEIIVDFSKYEKGTQLSLMSNKEAIMTFNVKGDGKDDTEVPSTLTNIERMSEAQATKIR SFELQGMGHMVSINGKKFDMNRIDETVKLGDTEIWEITNPGSMMHEMGHPFHIHGTQVQI LSRNGNAPSPEESGWKDTVYIEPNEKVRLIVKFNKKGTYMYHCHILEHEEAGMMGQIKVE >gi|333758476|gb|AFIH01000001.1| GENE 240 242152 - 242484 81 110 aa, chain - ## HITS:1 COG:SPy1717 KEGG:ns NR:ns ## COG: SPy1717 COG3682 # Protein_GI_number: 15675568 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Streptococcus pyogenes M1 GAS # 3 106 36 139 144 79 35.0 2e-15 MDWTPSTIKTILGRLVGKGVLNTEHEGRKFIYTANIEETEAARDYAEDIFNRICNKKVGN VIGSIIEDHVLSFDDIDRLEKILEIKKSFAVEEVACNCPEGQCKCHLHHH >gi|333758476|gb|AFIH01000001.1| GENE 241 242448 - 242600 90 50 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0424_0628 NR:ns ## KEGG: HMPREF0424_0628 # Name: not_defined # Def: copper transport repressor, CopY/TcrY family # Organism: G.vaginalis # Pathway: not_defined # 1 41 13 55 161 73 90.0 3e-12 MSTIEFNTYITDAEWEVMRVVWANDRVTSKKVISVLQEKWTGHHPLSKRS >gi|333758476|gb|AFIH01000001.1| GENE 242 243027 - 243410 128 127 aa, chain + ## HITS:1 COG:no KEGG:CKR_2354 NR:ns ## KEGG: CKR_2354 # Name: not_defined # Def: hypothetical protein # Organism: C.kluyveri_NBRC # Pathway: not_defined # 57 127 8 78 469 62 47.0 5e-09 MTGISDRIILLPKAKIEFIEKKDLEENQDQFKKRIRPFKKLNLNVYVLDFKENIDEIIKR IEDDNLEYTLRKYQNYPTEFIKENRKSSLLLDMGLDKMVIGLMAIKDLFFDAFAISKVLI IVLLRVA >gi|333758476|gb|AFIH01000001.1| GENE 243 244534 - 244608 59 24 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQAKPHNVAFGLHTYNLETFILKT >gi|333758476|gb|AFIH01000001.1| GENE 244 244676 - 245893 472 405 aa, chain + ## HITS:1 COG:RSp0310 KEGG:ns NR:ns ## COG: RSp0310 COG0477 # Protein_GI_number: 17548531 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Ralstonia solanacearum # 7 379 45 415 450 155 33.0 2e-37 MEKYNNWKRKFYAIWAGQAVSLITSAILQMAIIFYLTEKTGSAMVLSMASLVGFLPYAIL GPAIGVLVDRHDRKKIMIGADLIIAAAGAVLAIVAFCMELPVWMIMIVLFIRSIGTAFHT PALNAVTPLLVPEEQLTKCAGYSQSLQSISYIVSPAVAALLYSVWDLNAIIAIDVLGAVI ASITVAIVRIPKLGNQVQSLEPNFIREMKEGVVVLRQNKGLFALLLLGTLYTFVYMPINA LFPLISMEHFNGTPVHISITEISFAFGMLAGGLLLGRLGGFEKHVLLITSSFFIMGTSLA VSGILPPNGFVIFVVCCAIMGLSVPFYSGVQTALFQEKIKPEYLGRVFSLIGSIMSLAMP IGLILSGFFADKIGVNHWFLLSGILIIGIAIVCQMITEVRKLDLK >gi|333758476|gb|AFIH01000001.1| GENE 245 246013 - 246798 599 261 aa, chain + ## HITS:1 COG:BH1900 KEGG:ns NR:ns ## COG: BH1900 COG0488 # Protein_GI_number: 15614463 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Bacillus halodurans # 3 254 2 246 538 173 43.0 3e-43 MELILKAKDIRVEFKGRDVLDINELEVYDYDRIGLVGANGAGKSTLLRVLLGELTPPGCK MNRLGELAYIPQLDEVTLQEEKDFALVGKLGVEQLNIQTMSGGEETRLKIAQALSAQVHG ILADEPTSHLDREGIDFLIGQLKYFTGALLVISHDRYFLDEIVDKIWELKDGKITEYWGN YSDYLRQKEEERKSQAAEYEQFIAERARLERAAEEKRKQARKIEQKAKGSSKKKSTEDGG RLAHQKSIGSKEKRCIMLLKP >gi|333758476|gb|AFIH01000001.1| GENE 246 246774 - 247475 384 233 aa, chain + ## HITS:1 COG:CAC3007 KEGG:ns NR:ns ## COG: CAC3007 COG0488 # Protein_GI_number: 15896259 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Clostridium acetobutylicum # 6 229 237 460 528 168 40.0 9e-42 MYNAAKTLEHRIAALGKVEAPEGIRRIRFRQSKALELHNPYPIVGAEINKVFGDKALFEN ASFQIPLGAKVALTGGNGIGKTTLIQMILNHEEGISISPKAKIGYFAQNGYKYNSNQNVM EFMQKDCDYNISEIRSVLASMGFKQNDIGKSLSVLSGGEIIKLLLAKMLMGRYNILIMDE PSNFLDIPSLEALEILMKEYTGTIVFITHDKRLLENVADVVYEIRDKKINLKH >gi|333758476|gb|AFIH01000001.1| GENE 247 247593 - 247892 236 99 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0837_12212 NR:ns ## KEGG: HMPREF0837_12212 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_TCH8431-19A # Pathway: not_defined # 1 99 1 99 99 152 100.0 3e-36 MNQLEFQRNHLQMDYYSESYQDFERDFYRYSNMNIPLTFLTDDILKTMATSRKNYFVLNK EKSRDNRDHFFIFEVSTVDENPLIYHYTYKKTTIYLAEK >gi|333758476|gb|AFIH01000001.1| GENE 248 247879 - 248247 226 122 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0837_12211 NR:ns ## KEGG: HMPREF0837_12211 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_TCH8431-19A # Pathway: not_defined # 1 122 1 122 122 200 100.0 2e-50 MIDRSYLPFQSAREYQDTKMQKWMGFFLSEHASALSDDTNKVTYMSDLSLEKKLLLLSQV YAGQLRTRIQVIEKNKRVSYTGTIPSLTKDFILIKTTTGHINLKLKDIISIELVEEVLYE SA >gi|333758476|gb|AFIH01000001.1| GENE 249 248592 - 248837 145 81 aa, chain - ## HITS:1 COG:L180104 KEGG:ns NR:ns ## COG: L180104 COG0389 # Protein_GI_number: 15672570 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Lactococcus lactis # 1 74 402 478 488 75 54.0 2e-14 MRQIGVSYSGFVDESYTLLSLFDDVEQIEKDNRLQTAIDVVREQFGFLAIQKGTVLTEGS RNIERSKLIGGHSAGGLEGLK >gi|333758476|gb|AFIH01000001.1| GENE 250 248834 - 249022 103 62 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0837_12208 NR:ns ## KEGG: HMPREF0837_12208 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_TCH8431-19A # Pathway: not_defined # 1 62 1 62 62 102 100.0 4e-21 MILWNGTVALVLTTVVSIHIGYSRTEMKKSINAQNKIEPANLPKTMVSHVLVLFRKNTPL VQ >gi|333758476|gb|AFIH01000001.1| GENE 251 249272 - 250255 780 327 aa, chain + ## HITS:1 COG:no KEGG:Lebu_1402 NR:ns ## KEGG: Lebu_1402 # Name: not_defined # Def: filamentation induced by cAMP protein Fic # Organism: L.buccalis # Pathway: not_defined # 110 323 2 213 222 134 36.0 4e-30 MIQTGKFPKKKEVTAMGANYSEIQELLQQRADIQARMNLMPYDGNPEIKVSNDARYLYMR KRVAGKLTSTYVDLYSDELYQLLLRNAKERKDLNKALRKINKDLAVLGYEDKELSTRVLQ NLDFARANMKANIYDQAVLEGVATTFPQTEDIIENGKVSGVSATDVQKILNLKHAWEFIL DRDVIQSESNYHMLCHIAKLVNEGFFYDGGRIRGIPVQIGGTSYVPPLPVESAVIGQIEE IRSRDKDPIETAIELCMYCMKTQVFKDGNKRASVIFANHYLIAQGMGLLVIPEKNVPEFK KLLVRYYEGEPLEFIGTFLKEHCWKRF >gi|333758476|gb|AFIH01000001.1| GENE 252 250669 - 252096 737 475 aa, chain + ## HITS:1 COG:FN0191 KEGG:ns NR:ns ## COG: FN0191 COG2865 # Protein_GI_number: 19703536 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen # Organism: Fusobacterium nucleatum # 1 475 1 476 477 726 77.0 0 MDSKEIKQLIQNGEKIDAEFKESKNALTKDVFDTVCSFNNRNGGHILLGVNDKREIVGVS EDKVDKVIKEFTTAINNPQKMYPPLYLLPEVFDIDEKKVIYIRVPEGYQVCRHNGRIWDR SYEGDINITDHSELVYKLYARKQGSYFVNKVYPNLDIDFLDASVIDKAKKMAVSRNKNHV WENMSNEELLRSANLILTDPETRREGITLAAILLFGKDNSIMSVLPQHKTDAIFRVENKD RYDDRDVVITNLIDSYDRLIEFGQKHLNDLFVLDGIVNVNARDRILREIVSNTLAHRDYS SGYPAKMIIDDEKITVENSNLAHGMGALDLQKFEPFPKNPAISKVFREIGLADELGSGMR STYKYTQLYSGQNPLFEEGDIFRTIIPLKKIATQKVGGGNVPHDVPHSVPHDVPQGRDEL IEFIKAQVRLNNKITRQAIAEGAGVSVKTIQRTLKEIDNLKYVGSGNSGHWELNE >gi|333758476|gb|AFIH01000001.1| GENE 253 252190 - 252447 255 85 aa, chain + ## HITS:1 COG:SP0951 KEGG:ns NR:ns ## COG: SP0951 COG3070 # Protein_GI_number: 15900829 # Func_class: K Transcription # Function: Regulator of competence-specific genes # Organism: Streptococcus pneumoniae TIGR4 # 1 50 26 75 75 71 64.0 4e-13 MMGEYIVYYRGKIVGGIYDDRFLVKPVKSAIAYMPNAKYELPYDGAKEMLLVDDVDNKDF LTGLFDAMYDELHAPKPKKMKNTNI >gi|333758476|gb|AFIH01000001.1| GENE 254 253321 - 253893 552 190 aa, chain + ## HITS:1 COG:FN0473 KEGG:ns NR:ns ## COG: FN0473 COG1309 # Protein_GI_number: 19703808 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Fusobacterium nucleatum # 1 190 1 189 189 163 50.0 2e-40 MAQVLKEEVRNRILEAAEKVFYEKDYRGAKLTEIAKEADIPVALIYTYFKNKEVLFDAVV SSVYINFESAFDEEESLEKGSASERFDEVGENYIHELLKERKKLIILMDKSSGTKHTEAK HKLISQMQVHIEVSLKRQSKEEYDPMLAHILASNFTEGLLEIARHYQSEKWAKDMLKLIA RCYYKGVESL >gi|333758476|gb|AFIH01000001.1| GENE 255 253997 - 255751 1125 584 aa, chain + ## HITS:1 COG:SA2217 KEGG:ns NR:ns ## COG: SA2217 COG1132 # Protein_GI_number: 15928007 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Staphylococcus aureus N315 # 16 574 24 585 587 307 34.0 3e-83 MPEKELRKKVIGKNGLSNSLLALKIVCDLIPQILLVYLISSLITNNISEDNLKYILLGIF ISFALKGVFYYFATKVAHEKAYEKLTELRIDIIGHLKKLSLGFFKEHNTGELTNIVQHDV EQVEVYLAHGLPEIMAVTLLPTIIFIAMIFVDWRLALGMIAGVPLMYLVKVLSQKTMDKN FAIYFNHENKMREELMEYVKNISVIKAFAKEEEISERTLKTAREYIYWVKKSMGAITIPM GLIDIFMEIGVVIVMILGSIFLYQGNITTSNFILAIILSSAFTASISKTATLQHFSIVFK EALKSIGKVLTVSLPKKKTEQGLEFGNIEFKDVNFAYGKDGFELKNINLTFKKNSLNAFV GASGCGKSTVSNLLMGFWDADEGQILINGKDIKEYSQENISMLIGSVEQDVILFDLSIFE NIAIGKLNATKEEVIEAAKKARCHDFISALPNGYETRVGEMGVKLSGGEKQRISIARMIL KNAPILILDEAMAAVDSENERLIGEAIDDLSKDKTIITIAHHLNTIRDSDQIIVMDKGVV LDAGSHEELMKRCEFYKDMVEAQNKVDRWNLKNGGGSRKCLEKC >gi|333758476|gb|AFIH01000001.1| GENE 256 255733 - 257442 200 569 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 347 545 38 242 329 81 31 1e-13 MFREMLKLLTKTGKRDLIISSVFFALYGLSSIAMIVIVFSILFQIFDGTSLASLYKYFIA IGLLVVFKGICNMVADMKKHSAGFDIVQQIRERMIIKLKKFSLGFYTNERLGEINTILHK DVDNMSLVVGHMWSRMFGDFLIAAVVFIGLASIDFQLAIMMAVSVPIALIFLYLTIKQSE KIENQNNSALLDMVSLFVEYVRGIPVLKSFSNNKSLDNELMNKTKKFGETSKSASRFKAK QLSIFGFLLDIGYLVLLIAGTIFVVKGNLDALHFIIFAVISKEFYKPFASMEQHYMYYVS AVDSYERLSRILYADVISDKVNGIVPKDNDIAFENIDFSYEKDEFKMENLSFSIAEKRVT ALVGESGSGKTTITNLLLRFYDVHKGKITLGGTDIRDIPYDELLDRISIVMQNVQLFDNT IEENIRVGKKGATKEEIIKAAKKARIHDFIMSLPKAYETDIGENGGLLSGGQRQRISIAR AFLKDAPILILDEMTSNVDPVNESLIQDAITELAKNRTVLVVAHHLKTVQKADQILVFQK GNLLEKGKHGELLEKDGYYTKLWKAQYEV >gi|333758476|gb|AFIH01000001.1| GENE 257 257445 - 258029 179 194 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 1 188 4 188 223 73 28 4e-11 MILLKDVSYEWEDGRTALKNINLEIKKGEFVLISGKSGSGKSTLGSVMNGLIPHYYKGKM QGKAFASGKDISKLSLHEIGYIVGTVFQDPRSQFFTTTTDEEIAFGLQTICKSRDEIKQR VEEVYAELDIPELKGKSVFELSSGQKQKIAIASIYAMNPKVLILDEPSANLDMKATFDLF LILEKLKKKEQQLF >gi|333758476|gb|AFIH01000001.1| GENE 258 258041 - 258601 203 186 aa, chain + ## HITS:1 COG:SP1438 KEGG:ns NR:ns ## COG: SP1438 COG1122 # Protein_GI_number: 15901290 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, ATPase component # Organism: Streptococcus pneumoniae TIGR4 # 1 180 199 363 374 73 29.0 2e-13 MYYVKSLFDRFLLVKEGEIAQDLSREEVIHLEGAFWDENGLRTLELEEYRISEKKDLYQL NDESISGKGLKFCYPSTTKLGNKQNQYILNHLNFNMECGKAIGLIGLNGTGKTTFARVIS GLEKIKEGKIWAEKDKELNRKDLMDMSYFVFQDSDYQLFSESVLDEMLLGISSKDKKKIR KRQSLF >gi|333758476|gb|AFIH01000001.1| GENE 259 258598 - 258960 175 120 aa, chain + ## HITS:1 COG:MA1747 KEGG:ns NR:ns ## COG: MA1747 COG1122 # Protein_GI_number: 20090599 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, ATPase component # Organism: Methanosarcina acetivorans str.C2A # 1 94 437 530 614 68 37.0 2e-12 MSVLGLDKYIDKHPFALSRGEKQRLTIACGMMKQAKIFIYDEPTSGCDKDSMLSVAKLIE EQLKNGTTVLVISHDFEFLANTVSRLWVMGDGKIENVLNMSESNKFLILDKMRGGRELDR >gi|333758476|gb|AFIH01000001.1| GENE 260 259204 - 259317 113 37 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLLGIFILFNASSISLTLVVFVIYPPNIAIKVILDAK >gi|333758476|gb|AFIH01000001.1| GENE 261 259298 - 259654 132 118 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0868_0144 NR:ns ## KEGG: HMPREF0868_0144 # Name: not_defined # Def: cobalt transport protein # Organism: Clostridiales_BVAB3 # Pathway: ABC transporters [PATH:clo02010] # 1 118 117 234 234 171 87.0 9e-42 MKIPRSIGIPFSVLLRFVPTIKIERKALKENMKIRGIVRSRLFPLLHPIKYMEYTLVPLL MRMIKISDELSASALIRGLDSDEKRVTLTELRFRTTDLLIGLLGALMITLVIVIQKIY >gi|333758476|gb|AFIH01000001.1| GENE 262 259665 - 260249 361 194 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0868_0145 NR:ns ## KEGG: HMPREF0868_0145 # Name: not_defined # Def: hypothetical protein # Organism: Clostridiales_BVAB3 # Pathway: not_defined # 1 194 1 194 194 300 95.0 2e-80 MKNKLNGRDFITIGIFNAIGIVIYMAASFAMATTVIGGFIASGVSFMIAATVYILMAVKV KKKGVFTISGTLLGLIALSGGHLPHAVFAVIGGMICDLIIGNYESKGRMIIGYGTFALAD FLGTVIPVILFGTASFVERASKWKMSEVQINEALSYFKVSWAVGFGLTTFVLACIGAFVA TRILKKHFEKAGVI >gi|333758476|gb|AFIH01000001.1| GENE 263 260736 - 261329 551 197 aa, chain + ## HITS:1 COG:no KEGG:EUBREC_3502 NR:ns ## KEGG: EUBREC_3502 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 1 197 1 197 197 197 48.0 2e-49 MTRFDLLDNLVENGNGYLCTSQVLERGISKPTLADYVSKRNMERVAHGVYLAEDAWPDEL YLLYLSNKRIIFSHETALMLHGLMEREPNKTSVTVQAGYNSTHLRKKGIQVYQVKPDVYE VGVVEVQTSFGNTVRAYDMERTICDVLRYKDTMDVQIFQYAMKEYMASAHKNLNHLMEYA KRFQIESAMRTYTEVML >gi|333758476|gb|AFIH01000001.1| GENE 264 261326 - 262159 393 277 aa, chain + ## HITS:1 COG:no KEGG:EUBREC_3503 NR:ns ## KEGG: EUBREC_3503 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 1 277 1 281 287 262 47.0 1e-68 MIRTATQLKAKVRNLSGGDSKKAQILIRNFIMERFLERIALSRYRNNFILKGGMLVAAVV GLDTRATMDIDTTVKSLNLTKDNAVKIVEEIIAVNLDDGVQFQITKVTDIMEEHDYPGIR FMLEATLDKMRQTVKMDISTGDVITPRAVEYSYHLMFEGRVISLWTYNLETLLVEKLETI MARGTANTRMRDFYDIHVISHQEAFDREILKKAFLATSAKRNTTDQIPDFGDILSAVEAD ASMKKQWDSFREDSFFVGELSWNEVMVSVKVLAEVVL >gi|333758476|gb|AFIH01000001.1| GENE 265 262347 - 262805 243 152 aa, chain + ## HITS:1 COG:no KEGG:RPSI07_0258 NR:ns ## KEGG: RPSI07_0258 # Name: not_defined # Def: hypothetical protein # Organism: R.solanacearum_PSI07 # Pathway: not_defined # 2 136 44 179 190 88 37.0 1e-16 MRLYLSTLGKNPIVFEIEIDKKYCAKTYIEDYKELILYLEIKYDPNHTFKPVDLFEALNN KIPKKFQRKPNCSEVVSVASKRRRVEEADKIYFCGWRNNPTGYNISEMNIEKTRITFGDK IAAMCKLKNVSSCWTNISSDEYLKKINDLYSM >gi|333758476|gb|AFIH01000001.1| GENE 266 263104 - 264147 460 347 aa, chain + ## HITS:1 COG:FN1294 KEGG:ns NR:ns ## COG: FN1294 COG1670 # Protein_GI_number: 19704629 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Acetyltransferases, including N-acetylases of ribosomal proteins # Organism: Fusobacterium nucleatum # 3 145 12 159 183 98 39.0 2e-20 MILETERLILRPWEETDAEECYKYAKDPRVGPIAGWPVHTSEENSRQVIRDVLMVPETYA IVLKETGLPIGSIGLHHNDLAEKEDEAELGYWLGVNYWGQGLVPEAARELLRHAFEDLKL ARIWCSYYDGNDKSKRVQEKLGFKYQWTTGDAPVPRMGETRKGHVSLLTKEEWGKLITLY IPSLEDLWFRKKMMADTETMSYNRAWGGTIPFPKEEWSGWYDYWIIKHEGKRYYRYLKDN AGHFIGEIAYHYDSDRKLYLADIIVYAPYRKKGYGGIGLNLLCNAAKQNGVKLLYDDLAI DNPAITMFLKNGFMEEYRTHKIIMLKKNCTGRCLAFLGIFSLWNSKA >gi|333758476|gb|AFIH01000001.1| GENE 267 264481 - 264972 363 163 aa, chain + ## HITS:1 COG:no KEGG:SPH_1269 NR:ns ## KEGG: SPH_1269 # Name: not_defined # Def: N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC:5.3.1.24) # Organism: S.pneumoniae_Hungary19A_6 # Pathway: Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:spv00400]; Metabolic pathways [PATH:spv01100]; Biosynthesis of secondary metabolites [PATH:spv01110] # 1 163 1 163 163 251 74.0 9e-66 MSILFDEFSSICLYLNKIGIVPTLMGSLGLEFISKEDWEPSDIDIHVQGDPRGWEAPDEL RIYDWDKIMMVMEKLGYDLVDIHEHEFQKNGVSVEYGSIDSLYDFAGIAESDIELIQLNE IKFRVPSLKQFLQIYKASSKDSYRNDNNNNKDFKKIDWLNSHI >gi|333758476|gb|AFIH01000001.1| GENE 268 265494 - 265628 74 44 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVYVKIFPWRFLDEYDINAIRANIALDMVSGMYDYMALRETNSC >gi|333758476|gb|AFIH01000001.1| GENE 269 265660 - 265959 73 99 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227874070|ref|ZP_03992278.1| ## NR: gi|227874070|ref|ZP_03992278.1| hypothetical protein HMPREF6123_2217 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_2217 [Oribacterium sinus F0268] # 1 98 44 141 142 171 96.0 1e-41 MLCLYSIGLISYRFFQPTGKWILFTILVLWFTIQFFCHWYYTIFGASERKLKGYNACFKG TLRLIPMSEKRVIPDLYHIVLHILILLNGILCLLSRRPA >gi|333758476|gb|AFIH01000001.1| GENE 270 266281 - 266412 61 43 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIKYYIIPIIEICYSYIVYIIPIRRYNTKNGGMIDVHDSEASG >gi|333758476|gb|AFIH01000001.1| GENE 271 266384 - 267277 655 297 aa, chain + ## HITS:1 COG:MA2133 KEGG:ns NR:ns ## COG: MA2133 COG3177 # Protein_GI_number: 20090976 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Methanosarcina acetivorans str.C2A # 52 294 23 265 326 158 40.0 1e-38 MYMTVKQAAEKWGISDRRVRVLCAEGKIFGAYQEGRAWKIPYDATKPTDGRYQIKESLIP IIEGKLEVLRKRRPLTEGELERLNEEFITEYTYNSNAIEGNTLTLRETDMVLRGLTIDRK SLKEHLEVIGHKEAFDYVRQLVCENTEISEKVIKDIHYLVLADKKEDRGIYRRIPVRIMG AAHEPVQPYLIIPKMEELLAEYKNSKEDIVTKLARFHIEFEAIHPFIDGNGRTGRLLINL ELMKAGYPPIDIKFTDRLKYYEAFDAYHIKHNLSAMADMFARYLNQRLDLYLSILDN >gi|333758476|gb|AFIH01000001.1| GENE 272 267390 - 268289 359 299 aa, chain + ## HITS:1 COG:SP1062 KEGG:ns NR:ns ## COG: SP1062 COG1131 # Protein_GI_number: 15900932 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Streptococcus pneumoniae TIGR4 # 3 235 4 238 305 164 41.0 1e-40 MALLTLKDVSYFYEGTHNGICDISFEAEKGDFIAVVGKNGAGKSTLLNVLSGIYTPQHGS ITCSPKLTYHDLGISPQKQSIDWYLNVRDNIMLGAVLTGLSKKESQTATDSISEILDLAD FYTRSPDSLSGGQQQRVQVARALVHNPEIMILDEPTAGLDYRYSHGLFEYLKEKCFGEKK LALVSSHDLGMLEDYCNKILFLNEGQQFYYGSMRDFLSNHQLTREIEISFAGEISDTLKK ELIDQGAKLEEQTVSLIESSVDLNCIIGMLLAEVSITSISSERLGLKEIMMQEEVTENA >gi|333758476|gb|AFIH01000001.1| GENE 273 268282 - 269085 509 267 aa, chain + ## HITS:1 COG:SP1063 KEGG:ns NR:ns ## COG: SP1063 COG0842 # Protein_GI_number: 15900933 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 9 231 8 230 266 152 36.0 7e-37 MRKFQMYIQRGRLGLKGLPIMVNNELKALWSNKQIIYSSLISPILYFLFYSVGIQATFGD ISFNGTTVSFLSYSLIGIFAMSLFKEMYQCVYRMITDKRWGLLSLKILNGIHPAIYILGI ATFPIVGVVIQATILYILSFFIGGSFSLYRFCMIIVFLMISVLFWASILICVALLIKNYK QRDFVMDILLVPILFAAPLFYSFDNAPFILKYISRINPLTYQVDAMRAIAFGIPDFTTIC IVLVFTVVAYLFAIFCLSNTNFKNDEH >gi|333758476|gb|AFIH01000001.1| GENE 274 269269 - 269562 235 97 aa, chain + ## HITS:1 COG:FN1294 KEGG:ns NR:ns ## COG: FN1294 COG1670 # Protein_GI_number: 19704629 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Acetyltransferases, including N-acetylases of ribosomal proteins # Organism: Fusobacterium nucleatum # 3 97 12 111 183 65 40.0 2e-11 MMLETERLILRPWEETDAEECYKYAKDPRVGPIAGWPVHTSEEDSRQVIRDALMVPETYA IVLKETGLPIGSIGLHHNDLAEKEDEAELGYWLGVEY >gi|333758476|gb|AFIH01000001.1| GENE 275 269575 - 269817 249 80 aa, chain + ## HITS:1 COG:no KEGG:BDP_1367 NR:ns ## KEGG: BDP_1367 # Name: not_defined # Def: acetyltransferase (EC:6.3.5.2) # Organism: B.dentium # Pathway: not_defined # 1 74 59 132 133 97 60.0 1e-19 MPEAARELLRHAFLDLNLVRIWCGYYDGNDKSKRVQEKLGFKYQWTTEDAPVPQMGETRK GHVSLLTKEEWHGGIEETYR >gi|333758476|gb|AFIH01000001.1| GENE 276 269960 - 270358 91 132 aa, chain + ## HITS:1 COG:no KEGG:BT_4222 NR:ns ## KEGG: BT_4222 # Name: not_defined # Def: hypothetical protein # Organism: B.thetaiotaomicron # Pathway: not_defined # 9 45 4 40 357 67 78.0 2e-10 MDDIKKDPFEEYIRQSEPYKRELGYAWYTAMGLQAVDGLEASDYISNCGQLPDNLPIPEF TVNPSDNMVKFTAPEDRIVHGTERVTDKVTDGVTDGESATLQLLEIDPGYPYTAMSVILK LSRKTVSERIKK >gi|333758476|gb|AFIH01000001.1| GENE 277 270374 - 272167 1040 597 aa, chain + ## HITS:1 COG:NMA2230 KEGG:ns NR:ns ## COG: NMA2230 COG1479 # Protein_GI_number: 15795099 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 5 560 4 558 571 340 38.0 6e-93 MPTTIEVNKQSVEMLLGSGKSKPFVIPEYQRPYAWTEEQVETLFEDLWEFTTISGGAERE SSYFLGSVVSYENENGEQEIIDGQQRITSLFLLLRAIYTKLVATPESERTAEANNFIGKI EPTIWRTDKLTGTVDFKNILLTSRVVNNEGNEILRAILESGKTDENAKDNYSRNYRYFQT LFDRHSTENPLMIYQFIYAVLNQAILLPITADTQDTALTIFSTLNDRGLPLSDADIFKAK IYNQLEVEAKKAFIERWKDLDEQATDANESIQQLFYYNMFYYRALDQDTNTTTPGVRKYY SANKFERLYKKELLDTLFIILNLWKVINKGEEIEGEAWSKNNKIKQTLDILTSYPNEFWK YPVVIYYVCYRNEENFETRFARFLNKLLMELMTKYLMMPTINAVKPDILKLNSAIVASNI PIFEFKTVDVTQLEPYIHNPNRNAVRMMLKTLAYEHQDDLLPTKWEIEHIFPQKWQTNYF PKESDSTIKEKIEHIGNKLPFEKKLNIVAGNGYFSKKKKEYTLSKIAITNTMGTSEVMDW NLDSIMKRDLRISDEMAKIFARWNSEYLNFPIDKEKAEVPSEEDLDQIEEFKRKGWI >gi|333758476|gb|AFIH01000001.1| GENE 278 272196 - 273233 745 345 aa, chain + ## HITS:1 COG:STM3755 KEGG:ns NR:ns ## COG: STM3755 COG3943 # Protein_GI_number: 16767039 # Func_class: R General function prediction only # Function: Virulence protein # Organism: Salmonella typhimurium LT2 # 11 345 8 345 345 263 43.0 4e-70 MAKKKEEMSIRSGAVEYLTYVASIGEREDNIEMRYEDENIWLTQKMMATLYDVGTNTINY HIKKIFEDSELQEDSVIRKFRITALDGKSYSTNHYSLEMIIAVGFKVNSDRAVRFRKWVN QIAKDYTIKGWAIDSERLKNGGSVLTTEYFDRLLEQIREIRLSERRFYQKITDIFATALD YDRTAKTTKQFFAKVQNKMHYAVHGHTAAELIYERADADKPHMGLTTWAAAPEGKIVKSD VCVAKNYLSEKELRSLERIVSAYLDLAEDRAERRIPMTMEDWSKRLDLFLMADDREVLQD AGKITAEIAAAKAETEFEKYRVIQDRLFLSDFDKYMLELEENAKK >gi|333758476|gb|AFIH01000001.1| GENE 279 273444 - 275033 802 529 aa, chain + ## HITS:1 COG:alr1337 KEGG:ns NR:ns ## COG: alr1337 COG1397 # Protein_GI_number: 17228832 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ADP-ribosylglycohydrolase # Organism: Nostoc sp. PCC 7120 # 249 525 6 301 313 184 37.0 3e-46 MANYEDNRIRCSKATAEALITSDLDAYFKPIDFRKALGMLPYTRIEYDLYYGYECTILNL EDGRVDIGFCTRWYSNIDIIRAFIKKYPDAEWWINQGDVDIFHYYWLDGEVIEDTHHLTD EETEYLSSLWDKYSDIGDESDHFDMIFTEKEDQSKYINFHPKKESKEYKGYLSLVNCIAK KIIDENKFYALKKYDYHWEGAYRHYETCMAIRALYLYKASEDLSKYKLNIMSKDILNQLQ NLIYPYNKKLYDAIFGFAIGDALGVPYEFQERGSFLCTDLTGYGCHHQPAGTWSDDTSMT LATLKSLKENNGKINIEDIRKRFLSWLRENAFTANGEVFDIGHATYEALTSGKPCVGERS NGNGSLMRILPLAFVECTDEEIRAVSAITHGHWISEEACVIYVHVAKRLLAGENILDILP SLQYDKPFDRLQRIHQLDISEIKSSGYVVDTLEAALWAISHVEENDERTGTVIKDYANDV LAAVNLGEDTDTVGAVAGGLAAIVHGLGYKGEQWLERLRNKELILECLW >gi|333758476|gb|AFIH01000001.1| GENE 280 275074 - 276039 554 321 aa, chain + ## HITS:1 COG:no KEGG:bpr_I1697 NR:ns ## KEGG: bpr_I1697 # Name: not_defined # Def: hypothetical protein # Organism: B.proteoclasticus # Pathway: not_defined # 14 321 1 308 309 463 66.0 1e-129 MHTKWKHPKEAFNLIINTGQRTDIPAFYAEWFANRLKEGFVCVRNPYNPNQVSRYRLDPS VVDVIGFCTKNPAPMFPYMELLKAYGQYWFVTITPYGKDIEPNVPDKHLLIEHFKHLSMQ LGVNSIGWRYDPIFLSERYSKDYHLKAFEQIATALEGYTKTAVISFVDLYPKVKRNFPEL RMLGKEDRLLLGKAMIAIARSHGMTLKPCAEGNELAEYGADCGGCMLISDYEKAIGKRLH VPKKKGARAACACYLSSDIGAYNSCKHLCKYCYANADPAIVMKQSRLHDPKSPFLIGNYE KNDSIHDVPQQSWVDGQMSLF >gi|333758476|gb|AFIH01000001.1| GENE 281 276229 - 276915 482 228 aa, chain + ## HITS:1 COG:FN1387 KEGG:ns NR:ns ## COG: FN1387 COG2220 # Protein_GI_number: 19704722 # Func_class: R General function prediction only # Function: Predicted Zn-dependent hydrolases of the beta-lactamase fold # Organism: Fusobacterium nucleatum # 3 227 2 233 237 109 29.0 4e-24 MKVTYLNHSGFLLELEDCYIIFDYYRGELPPLNKEKEVFVFCSHAHADHYNPKVFSLLTE QGMSYQAVLANDIRDEKRLSKVKHCFVEADKSYPLDHEIQLETLLSNDSGVAFILKTKEG SIYHAGDLNDWYWEGEPEEDNRRLREIYHREIGRIKGRHFDLAFVPLDPRLEAHYADGIL YFLENVDCDAVFPMHYWGEPDVIQRFITEYPEYRSRIKNTETAKGEEL >gi|333758476|gb|AFIH01000001.1| GENE 282 276912 - 277268 201 118 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148984704|ref|ZP_01817972.1| 50S ribosomal protein L20 [Streptococcus pneumoniae SP3-BS71] # 1 117 1 123 126 82 38 1e-13 MKFKMIHENLNVSDLNRSLRFYEEALDLHEVRRKTSEDFIIVYLKSDAGDFELELTWLKD HPQAYDLGECEFHLAFQADDFEEAHKKHEEMGCICFENEAMGIYFIEDPDGYWLEVLP >gi|333758476|gb|AFIH01000001.1| GENE 283 277502 - 279019 1018 505 aa, chain - ## HITS:1 COG:no KEGG:DSY2713 NR:ns ## KEGG: DSY2713 # Name: not_defined # Def: hypothetical protein # Organism: D.hafniense # Pathway: ABC transporters [PATH:dsy02010] # 268 503 5 243 244 156 38.0 2e-36 MNNLSYIPKIVSIEFQKARHKHFPLLFLAALLLDCAYLFYGIKASSEPWLNIFYAIPIIN TLVLSVLMAVIASQSVDMEHKGAMWNLLPTLESRASIYLGKLFFGFISLVLFCTFQIGMV LIGGKVLGFTGNIPSHIVPVLFFSELIGGIILYQLQCTLSLLFSSQFAALSIAFGGTLAG LFLAFISTDMWTPWSVFLSLSPIGMDYDQASRLMSLSLRSIPISDILLSLLYLIGTFLLG LFLFTSMEHGEALFSLHRQKVSRSLHSSLSPKFIKLKRNPIWIPFLLIPLISALIGTVNF VQNQGVLQYTWEDLWTQQSLFLGMFFLAPLIGILCSLLWRMEHQGSNWNLILTVTTPGKL IWDKWFTATLLSTLCMVWISFIYLLSGKILGLPGAVPAIFWMRILSAVLSIAAITALQST LSMFFHSFALPIALAFLGSIAGFTLTVKGAYYALPYSTLIYGMGSTSITGELNFPILLLS CAFYIFAALGIGILYLKKSDVRTHV >gi|333758476|gb|AFIH01000001.1| GENE 284 279016 - 279741 250 241 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 1 209 1 212 311 100 31 2e-19 MNYILETQHLSKKSGNSYRVKDLSLSVPEKCVYGFLGPNGAGKSTTLKMILGLIHPDEGE IQFLGKTVNSQNRLSLLQKTGSLIENPGGYGHLSGLENMQIVQKLKGVKEEEIASALKTV RLYEQRDKKLSSYSLGMKQRLGIAMAILGNPKLLILDEPTNGLDPAGIQEIRELIVSLPK ERNMTVIISSHLLSEIEQMASQVGIIHHGQLLYEGPLQELECNGKSLEEAFLEMTGGKES L >gi|333758476|gb|AFIH01000001.1| GENE 285 279928 - 280635 436 235 aa, chain + ## HITS:1 COG:CAC0289 KEGG:ns NR:ns ## COG: CAC0289 COG0745 # Protein_GI_number: 15893581 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 4 233 5 235 235 174 39.0 2e-43 MDKEHCKILVVDDEKELRELLQELLRKEGYFSVEAVSSCKEAEAKLSENCYQLILLDVML TDGNGFDFYKHQKREGLLSEVPVIFLSARDEDRARLHGLGLGADDYITKPFLPEELILRI AAVLRRTCHLEEKEQGVQLGESLVSIDAGTVIRQGEKLSLTAKELALFSILYRNKGKIVT TDTLCDALWPDGNFGLESSLLVHMRHLREKIEKEPSKPVFLLTVRGLGYKLEIGR >gi|333758476|gb|AFIH01000001.1| GENE 286 280656 - 281843 849 395 aa, chain + ## HITS:1 COG:phoR KEGG:ns NR:ns ## COG: phoR COG0642 # Protein_GI_number: 16128385 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli K12 # 172 381 199 408 431 105 34.0 2e-22 MQLIALVFLLTIFLLFADLLIFGIFVSRNGMPYYPDSEEIMEHLHKEKGEYRLEEEEAEK LSGARQFAMLLDNGGNILWSEFLPKELQKNYTLQDVAKFTRYYLEGYPVRTYVVPEGLLI IGQKKEQIWKYTLEYDENAVRNLIELLPLLFLANAVILVSVPIWIQKKRAKQKEEERTEW IAGVSHDIRTPLAIVLGNAEMIVATTESEEIKDRALRIEKQGLRLRRLVENLNLFSKLSF GYGNLEKEKIQVSRFLRKTITEMRNQTEDERVQFTLDIQEDLQGLELCFNENLMERALMN LLYNAVQHNPEGCEITVKLYQDEKAHVFLHVEDNGCGLEKAALERLNRKDYEWEPSTGQH GLGLKIVKQVISRHRWKVRFEEGSQGGFLCCVQMR >gi|333758476|gb|AFIH01000001.1| GENE 287 282025 - 282531 437 168 aa, chain + ## HITS:1 COG:no KEGG:Olsu_0226 NR:ns ## KEGG: Olsu_0226 # Name: not_defined # Def: transcriptional regulator, TetR family # Organism: O.uli # Pathway: not_defined # 1 167 33 199 200 151 42.0 9e-36 MRDILAEVNGAPGMFYYYFKSKEDIFLACMEAYFSERLKVKVDLLKNKDIAYEERIKILR ELITKDIRSFTHSFDFSADHSITDNSYRLWELTHYIGRFVVAYADFILEGIETKKIENHI GVTKENAREIAAFILYGAIGTIYSDAKNGKDEPHSPESVFQVIGRIFA >gi|333758476|gb|AFIH01000001.1| GENE 288 282692 - 284470 1167 592 aa, chain + ## HITS:1 COG:YPO0771 KEGG:ns NR:ns ## COG: YPO0771 COG1132 # Protein_GI_number: 16121084 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Yersinia pestis # 11 587 11 584 590 330 32.0 7e-90 MKDTKKSIDELVRLCGTKKGSLIAGNILITMGAILNILPVLLSYKIIVSLITKKEARGNL ISYAIYGVLAVFAAYLFTYIGSILCHTFSYRFIANLKKKIVSHIATLPLGYFTGEHKAKL KQVLSSDMNQIEGYYAHQLPSLVSTLLLILSLLFFMFRMNVVFALLTLTAIAVGLMIQVS IMVKIVKSGGLEENFKILDRINSATNEYVKGMPEVKIFGNSTSSFQNYENAVNQYRQFTE TMTARIRPGFVAFRVVILSVATFLVPVGILLLTKKPNDMATMRTVLFFWIVAPAMSVPCL KLRDFAEGMNLLEDVVQRVWDVLVEKELAEGKYTEKLKNYDIIFEKVCFSYEKEQVLKDI SFIAKQGELTALVGASGAGKSTIGALIPRFYEPTDGVIKLGGVNIQEMPSKSLMENISFV FQDNDLLSGTIFQNIAMAKKGCSKEEVIEAAKKARCHDFIMKLEKGYETILGKGNSLSGG EKQRIAVARAMLKDAPVLILDEATSYADSKNECLFQEALAELVKDKTVIMIAHRLGTIKN AQQILVLSEGQIVERGTHESLMKKEGVYRKMVSIFDEVRSWKMKQEGGLYHA >gi|333758476|gb|AFIH01000001.1| GENE 289 284463 - 285197 308 244 aa, chain + ## HITS:1 COG:SP1435 KEGG:ns NR:ns ## COG: SP1435 COG1132 # Protein_GI_number: 15901287 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Streptococcus pneumoniae TIGR4 # 5 242 19 250 581 83 25.0 3e-16 MLKNITLGKPETLIKPVLLNTLSSISNLIPFICLVRIVKSLILSSQNGKTDIASLWKYFA LMVLFFLLTLFFENLATKYTYEFGYQKTAEGRIRLANHLRSLPLGFISGKSSTEILDTLM HDFSIVEIATTHQAPQFFSSVFVALLCVIFFFTVDIKMGVAAFIGFPLSVLFLNLMQYFQ KKMLLKTEVAKRNEQDALEEYLTTIKTVKAYNFTPDTIEKIHKAIERAEKSNIKTKKGLV LSSL >gi|333758476|gb|AFIH01000001.1| GENE 290 285230 - 286204 242 324 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 74 296 2 228 245 97 29 2e-18 MSLVGLNLLLKGSLSPEKFLLFLFVGTRIFDPLDLALVNYAALQIASISGERIRKLLAEK PMPGKEVLNAENTVELSDVSFSYEERKVIQNLSLQIKEKEFLALVGSSGSGKTTLLKLLA RFYDVQEGRIQIGNSDIAKASPDEVLRKFSIVFQDTLLFRDTIYNNIQFGNPSAKREDVI EASKMAGAYDFIMRKENGFETMVGEGGSTLSGGERQRISIARAILKNAPIILLDEATASL DPENEEAVQNAISNLIQNKTVIVVAHRLNNVVAADKIVVLQEGRIVEQGKHEELLNQGGM YRELWDYQEKVKNWQITNTSPKLS >gi|333758476|gb|AFIH01000001.1| GENE 291 286296 - 286889 368 197 aa, chain + ## HITS:1 COG:no KEGG:Olsu_0225 NR:ns ## KEGG: Olsu_0225 # Name: not_defined # Def: hypothetical protein # Organism: O.uli # Pathway: not_defined # 3 196 5 198 198 196 55.0 6e-49 MSRTKKSSKNAITAGVLITVYLVTYVFIGALSMPIPILFLLMPMIVALFAAPTYHMLLAK TKSATAIMIAAVLPSILLIATGHIPIAPLVSVPAGLLAAWVAKTGNYEDFKKNAISHLFF SLNLFGGFLPIWVMREAFFRSVQHGGLDQSFCDTVRAFTPLWMLPLMMAGTFLFSLAGSY LTKKILYKKLQSAGVLS >gi|333758476|gb|AFIH01000001.1| GENE 292 286886 - 287446 89 186 aa, chain + ## HITS:1 COG:SPy1788 KEGG:ns NR:ns ## COG: SPy1788 COG0619 # Protein_GI_number: 15675627 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Streptococcus pyogenes M1 GAS # 15 186 1 172 226 58 25.0 5e-09 MMEALMKGRRFAPSLRYDLRTKLIVLIQVNLLLFLGNSIAYEAFLTLLCLFVMISSGCIR YSVRYVVFFILSIVVETIVVNLGHPFFLSLILFLVVIMRKFLPSVIIGKWILSSTSSSLA VATLQRMRVPKDALIMISVIFRCFPTIQEEWSNIHMAMKTRGISMDFYNFVHRPLLTIEY FLFPYL >gi|333758476|gb|AFIH01000001.1| GENE 293 287625 - 289115 185 496 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 318 493 22 211 245 75 26 7e-12 MITIKNLSFQYSTEEDFVLRNIDLSVHQGECILLCGKSGCGKSTFLKIINGIIPEFFQGK ITGRVEVAGMNPFETEIYKISEKVGSVFQNPKTQFYTTNTTDEIAFALENYGVEREKIQK RLKEVQETMHISSLMDRNIFALSGGEKQKIAIAAVYALNPEIFVFDEPSSSLDMDSMIEL SKLMERLKEEGKTIIIAEHRLWYLKKIVDRAVYLENGKITKEYSMEEIQNLSEEERCRTG LRHTDFSDNAWKERSAIMLSASEKHTDIEKRSFVSHLFKVERKDSAVKRDSSGNALELEI KDLLYKRKERTIFKIDRLGFERRKIVGIVGKNGMGKSTFAKVVCGLARQTTGEICKNNKG ISVPKRRKNSLLLMQEINNQLFTDSVYDEIRLTSAFKEEEQFCTCMADMQIDQLKEKNPH SLSGGQKQRVVILSALLSKKKILFLDEPTSGLDYASMKVVAKNITKFKAEKNLILIISHD MEFLEEVCDRVLFFPL >gi|333758476|gb|AFIH01000001.1| GENE 294 289289 - 291976 2576 895 aa, chain + ## HITS:1 COG:STM3763 KEGG:ns NR:ns ## COG: STM3763 COG0474 # Protein_GI_number: 16767047 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Salmonella typhimurium LT2 # 1 895 4 908 908 726 41.0 0 MILNNEKKLNPMTKSAGVEQEFQKIAGKEASSVLQELGCTANGISDEEREERLEKYGYND LSAMQKHGVFYFLFHSFTDAFIIVLLVLAIVTFVVERDILSGVIILALACMSAVIRFTQD YGSYLDMQKLKDMEHDTVRIRIPGKDGTEIREVPVEEVVPGDIQLIGSGDIVCGDLYLLE SRDLFLSVSAFTGESIPVEKYTGVDQRIVNAAELNNLCLGGSTVNSGTGVGIVVRTGKNS YLGKISSTIHTQKKETDFDKSLSKITKILISYMIVVVLFVLLINGLVKKNWLEAFLFSIS VAVGITPGMLPMIVNGTLAKGAKFLAKKKTIVKNMSAIQNLGAIDVLCTDKTGTLTMDNV VLQKYINVNGEDSYVVLNYAWMNAYYSTGVKNLIDRAILSYGAESDVQKYAGGYVKSDEI PYDFERRRMSVVISNPGGEHLGEETEEILPKPQDEVLITKGALESVLSCCSRIRVKKEYM DIQEEDLQKINALSEKLNHEGMHVIGVAAKRKNAGDTAVFHAEDETDMTFLGIIAFLDPP KPDAKEAIHGLYDAGVQVKVISGDAPVVVEHVCKLVGMKVGEQNAVTGSDLEKMSEEELS SVVEKKDIFARLSPMQKQRVVDALRKNGHVVGYMGDGVNDAPSLHDADVGISVDNATDVA KASADIILLEKSLTVILNGIYEGRRIYGNILKYMKMALSGNFGNVFSVLIASIFLPFLPI LPLQILIQNLIYDFTQIAIPWDNVDEEFLQKPHKWNSASLVSFMNVMGGVSSVFDVMTFL VLWFLLGYNSLSMQNYFQTGWFVEGLISQILIVQFIRTSKRPILDSKCDSRLALASALGI FAAISIPYLFHNLDNTVFTEMPMTYFAYLLLILALYSFTIETVKKLYIRKYGAWL >gi|333758476|gb|AFIH01000001.1| GENE 295 291946 - 292197 67 83 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPIFANIAVNDAKMDDKIAKISHILLPPQSYPNNFSCAHLSYAQLISFLISFGKCRTTKD TNNTVSKTIFKMSAYSQAPYFLI >gi|333758476|gb|AFIH01000001.1| GENE 296 292127 - 292540 437 137 aa, chain + ## HITS:1 COG:NMA0616 KEGG:ns NR:ns ## COG: NMA0616 COG2510 # Protein_GI_number: 15793606 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis Z2491 # 2 137 6 141 143 103 45.0 9e-23 MWLIFAILSSIFASLTAIFAKMGIEDVNSNLATAIRTVVVLLLSWIMVFFVHAQKGIGQI SWKSWIFLILSGLSTGASWLCYYKAMQIGDVSKVAAVDKFSIVITMLLAFSLLHETSSIK TILACILIAGGTVLMAL >gi|333758476|gb|AFIH01000001.1| GENE 297 292554 - 292988 300 144 aa, chain + ## HITS:1 COG:lin0983 KEGG:ns NR:ns ## COG: lin0983 COG3279 # Protein_GI_number: 16800052 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Listeria innocua # 25 144 26 146 151 77 35.0 7e-15 MKVDIQKVNSYEEEQAVIRVFKVTENIQTAINALENSAPVITARCNGESVFCPIDKIYYI ESVDKRTFVYTKDNCLEVQYRLYELENTLSRNFFRAAKAMIINMRKIKSVRAELNGRMTA ELLNGERVIIARSYVKELKERLGL >gi|333758476|gb|AFIH01000001.1| GENE 298 292990 - 293424 327 144 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227874031|ref|ZP_03992242.1| ## NR: gi|227874031|ref|ZP_03992242.1| hypothetical protein HMPREF6123_2181 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_2181 [Oribacterium sinus F0268] # 1 144 1 144 144 232 89.0 6e-60 MQKLKIIFHQTFMISTAILFGIGMLMLIQHFALGVQTLSLQWSDPLSICFTGFLSSLPTY FLLDMDSLKKSEVRIRIGIHFVSVLGIVVLCAQIFHWFGQIINLRIICLMYSAIYLFVWC ATAWMAKADEIKINEAIKDLQDAE >gi|333758476|gb|AFIH01000001.1| GENE 299 293490 - 294233 788 247 aa, chain + ## HITS:1 COG:SSO2832 KEGG:ns NR:ns ## COG: SSO2832 COG1402 # Protein_GI_number: 15899547 # Func_class: R General function prediction only # Function: Uncharacterized protein, putative amidase # Organism: Sulfolobus solfataricus # 23 200 16 175 233 67 28.0 2e-11 MKKVLYEELLPEEYVQRIKEMPVAYLPLGTLEWHGPHMPLGADGIQSKELFVRVAEKIGG VVLPMLFMGPDRVFDDWGTVFYGMDINTEGALNTYYAQQMKGSAYWMEKGLFQNLLRSIL AQLSRAGVRIVVGHGHGPSTNAFQELKEEAEEKYGLRIMTAWTYAEDERLKYQNDHAGAN ETSIVMAVRPELVDFGQVKEDESNLIGIAGRHPVRESSAAFGNEILEYTMKTLIAGIEKE YKTIRER >gi|333758476|gb|AFIH01000001.1| GENE 300 294388 - 294495 68 35 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSKPVRQNNKLRQQGRIVGKITGQNYSGAKKERIE >gi|333758476|gb|AFIH01000001.1| GENE 301 294492 - 295403 594 303 aa, chain + ## HITS:1 COG:lin0985 KEGG:ns NR:ns ## COG: lin0985 COG1131 # Protein_GI_number: 16800054 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Listeria innocua # 4 296 2 296 303 248 43.0 7e-66 MNAITVKNLSKNYGKTTAVDHISFSVKEGEFFAFLGENGAGKSTTINILCTIFEKTEGEV EVFSHKLGEEDDKIREKIGIVFQNSVLDGVLTVKENLLTRASYYGMHKEEILERLHPLMQ AFELESIWNRKYEQLSGGQRRRVDIIRALLHNPKILFLDEPTTGLDPMSRKLVWEYIDYL RKEKQMTIFLTTHYMEEVRDADRVVILDKGRIVAEDTPAALKRKYTNTKLIWYVEKCSDN EAVLKGIEHSYEADHYIVPLESKEGFHLSEFLYTNRNKIRDYEIVKGSMDDVFLHLTGRK LEV >gi|333758476|gb|AFIH01000001.1| GENE 302 295405 - 296325 660 306 aa, chain + ## HITS:1 COG:Cgl2007 KEGG:ns NR:ns ## COG: Cgl2007 COG0842 # Protein_GI_number: 19553257 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Corynebacterium glutamicum # 9 261 7 252 289 87 26.0 3e-17 MRGILGFIKRNVLLFFKDWQSILFSLLTSIIVLVLYLLFLKGTFVSAIQSAMEQYPGLTS MVSQKDIAMFANLFLLSGILGSAMISVPFSCITVLVKDRANKVDYDILATPMKRGQIIFA YFVSAVLTSILLNSIILAVGLIGIRMQGNMYLNISQVIKAFSIVALGSISASAIFMIVVL FFKTVSACEAFFGILSAASGFVIGAYIPISQFSNEVQTVCNLFPASQITIMLRNILLNGL LEHINTSLQGVDQGMFVLSLKEYFTFQAKLFKGYLDMNKMLEYILGVILFCIVTQIMIYS GSYKKN >gi|333758476|gb|AFIH01000001.1| GENE 303 296385 - 296585 131 66 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGKDNVNNNVITVEIIMVFDIISIPPKIPLISKARSVIKKQVLIKKFKIYYKFTIMNVKR NIKDAL >gi|333758476|gb|AFIH01000001.1| GENE 304 296620 - 297024 431 134 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|291460640|ref|ZP_06600030.1| ## NR: gi|291460640|ref|ZP_06600030.1| conserved hypothetical protein [Oribacterium sp. oral taxon 078 str. F0262] conserved hypothetical protein [Oribacterium sp. oral taxon 078 str. F0262] # 2 134 29 161 161 157 55.0 2e-37 MKKFSANNRNGAILHLYGKQVKIDGSSLVNVPFTTGKDLEIIVTVTPGQHTIEGIFESTE TVGTKTRNVRTEKLSFNLSVEAGHSYSAALYFYSAEERADYYKGRTGKTILEIPLTIMED SDYIKVYIIVYRED >gi|333758476|gb|AFIH01000001.1| GENE 305 297005 - 297157 122 50 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSIGKTKKEPLKGPTAPYDGYDEREDTEEKVRQALAFLQVLFLIFKFPKN >gi|333758476|gb|AFIH01000001.1| GENE 306 297347 - 297964 653 205 aa, chain + ## HITS:1 COG:MA2782 KEGG:ns NR:ns ## COG: MA2782 COG1309 # Protein_GI_number: 20091605 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Methanosarcina acetivorans str.C2A # 5 163 5 164 201 82 30.0 7e-16 MEADMKKGEQRKQELLKLAYRMFIEKGYENTSIDEIVAKAGIAKGTYYYYFASKEATLEA VIEMMIEKESAVAKELLQAPLSIPEKLVSVVNAFRPEKEEAVITDVLERKENIVMHDKIC KKIVEVAVPILAEIVKEGIAQGIFSCTYIEERVKMLLVTSQHMFDYGNFGEKDVEVYIDM LEKSLGAKSGTMQFINQVLVEGAKE >gi|333758476|gb|AFIH01000001.1| GENE 307 298183 - 298908 650 241 aa, chain + ## HITS:1 COG:MA1162 KEGG:ns NR:ns ## COG: MA1162 COG1266 # Protein_GI_number: 20090028 # Func_class: R General function prediction only # Function: Predicted metal-dependent membrane protease # Organism: Methanosarcina acetivorans str.C2A # 6 229 48 271 289 151 40.0 1e-36 MLLGLLAPAVVSTVFVLVSGCEELKRDLKEKIIGFYKVKWMNVFWAVVLYALIIVFSILL SLLFGQSLKQFSFTEDFSFTGVGIGSAFVTITLASIIEEVGWKGYCEDSIGQYMDWFIES LIFGILWSLWHFPLLFIEGTYQAGLMVNPLFAINFFVGAILMGYIITWVYLVSDRSILAC MVFHLFVNFMQEKIAMTAETKCVETIVIFIVTAIIVLLNKKMFFGTEHVGRLLKTRFGEG N >gi|333758476|gb|AFIH01000001.1| GENE 308 298910 - 300139 631 409 aa, chain + ## HITS:1 COG:MA1161 KEGG:ns NR:ns ## COG: MA1161 COG0477 # Protein_GI_number: 20090027 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Methanosarcina acetivorans str.C2A # 7 405 11 425 443 299 40.0 6e-81 MSSGMKKFILLWMGELISSIGGGLTSFGLGVYVFQKTGSAAGMALVTLLGFLPTLLFTVP AGVLADRYDRRVLMMIGDGCSGLGILYIFLCMLHGEANLVQISIGVFVSAIFSSLLDPSY RATITDLLSKEEFSKASGLVSLAGSARYLFSPVIAGLLLVYHDISLLLLIDISTFFVTIA TTFIVRRGIKAKQPTEKQSFLESMKEGWRAIHIEKGVFVLVLCSSLITLFLGTLQILVEP MILSFADSKVLGIVETLCASGMLVSGMLLGGFGIKKEYGKVLQISFFMAGIFMIGMSIFE NLLSISIFGFFFFATLPFCNNCMDYLCRTNIPDALQGRAWGFIGFLSQLGYVIAYAVSGL AADGLGSLSGMGVGRGAAMMIGISGVFLSLVAVTFLRFPSIRELEKRTE >gi|333758476|gb|AFIH01000001.1| GENE 309 300204 - 300599 335 131 aa, chain + ## HITS:1 COG:no KEGG:str1624 NR:ns ## KEGG: str1624 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 6 125 1 120 127 135 62.0 5e-31 MHQKKMNLFLRVLFIILIIAISGAAILQIFAPEYMGRNSAYGISIGWQREIGFWNIAVLV ILITAYRHYNWTYLKSILLALILGGIGIGSNHFIHYLKMHQMVNLIGSLENYLLVLAWII GLKIEERRQNL >gi|333758476|gb|AFIH01000001.1| GENE 310 300596 - 301567 635 323 aa, chain + ## HITS:1 COG:CAC3607 KEGG:ns NR:ns ## COG: CAC3607 COG1893 # Protein_GI_number: 15896841 # Func_class: H Coenzyme transport and metabolism # Function: Ketopantoate reductase # Organism: Clostridium acetobutylicum # 1 317 1 307 308 106 25.0 6e-23 MRICVVGLGVIGTTYGYVFQKAGHQVEHLLREEKKSKAPTSLNISLLDGRYNKKGEEKAD QYKVNLAESNAEYDFIILSVASGKIKDAITTLSQNHITGSLILFCNFWNSREEIDEIVGA YPYIIGFPTAGGKLVENELDCVLFDHIMLESEEKAGISNYKALTALLASANLKTEIPHDM VEWIWLHMAINAGVTSSAAREGKIEHPAQLALNLMKDAHALSITVKAIRETIQVVKARGV DLSFYKNELLPYRIPAAFAGILMKRMFKTNELTRRIMTLHSDVGDMLYGCKCVYETGKLK HLELPIFYSNIEVLGSIWESSPL >gi|333758476|gb|AFIH01000001.1| GENE 311 301786 - 302049 277 87 aa, chain + ## HITS:1 COG:no KEGG:SGO_1740 NR:ns ## KEGG: SGO_1740 # Name: not_defined # Def: integral membrane protein # Organism: S.gordonii # Pathway: not_defined # 1 87 1 87 87 146 91.0 3e-34 MSKQKINLFVGSIGAFIGIFVFIAYIPQIFANLQGDKAQPFQPLFAAISCLIWVIYGWTK EPKKDWILIIPNSAGVILGGLTFLTAL >gi|333758476|gb|AFIH01000001.1| GENE 312 302270 - 302725 248 151 aa, chain + ## HITS:1 COG:CAC3531 KEGG:ns NR:ns ## COG: CAC3531 COG1943 # Protein_GI_number: 15896768 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Clostridium acetobutylicum # 7 151 5 149 157 191 63.0 4e-49 MAKKEYALAHTKWMCKYHIVFTPKYRRKIIYYQYKSDIRDIIKQLCAFKGVEIIEGHLMP DHVHILVSIPPKISVSSFMGYLKGKSALMIFDKHANLKYKFGNRHFWAEGYYVSIVGLNE ATIKKYIQDQEKHDIALDKLSVKEYEDPFKG >gi|333758476|gb|AFIH01000001.1| GENE 313 303075 - 303686 439 203 aa, chain + ## HITS:1 COG:no KEGG:LSL_1338 NR:ns ## KEGG: LSL_1338 # Name: not_defined # Def: DNA-binding protein # Organism: L.salivarius # Pathway: not_defined # 1 200 1 201 203 180 46.0 3e-44 MDQIKIGKFIASCRKEEGMTQAELAEKLGISDRAVSKWETGKSMPDSGIMLELCGFLKIK VNELLSGERIMAELYSKQLEENLLAMRREVEERDRRALKLEYWLGFSAVLSGSVLILLAS FLVMPFWLRMVLSAFALMMILLVSFIAVGIEQKAGFYECGCCHHRYVPSYGKVILSMHKG RARYMKCPVCGKRSWQKKVLGEE >gi|333758476|gb|AFIH01000001.1| GENE 314 303819 - 305132 873 437 aa, chain + ## HITS:1 COG:FN1715 KEGG:ns NR:ns ## COG: FN1715 COG1373 # Protein_GI_number: 19705036 # Func_class: R General function prediction only # Function: Predicted ATPase (AAA+ superfamily) # Organism: Fusobacterium nucleatum # 7 430 3 423 430 337 45.0 2e-92 MEINREINRDVYLNRLIVRKHNGFIKVITGIRRCGKSYLLNTLFYKHLLSEGVEESHIIR FAFDTAEDLLKIGEDPIVLDNEREERKVDPSRFITWLMPQIRGEGMYYLLLDEVQKLGAF ESVLNGFLRKQNVDVYVTGSNSKFLSKDILTEFEGRGDEVHVLPLSFSEYYTFKEGDKSE AYDDYSVYGGLPAVVLMNTEEQKTNYLISQMKNVYLRDIVARYSVQDESALGEVIDVIAS GISTLTNPRKIAATMNSVHGTNISDTTVDKYITYGEEAFMLSRVKRYNVKGRKYIGTPYK IYFEDLGLRNARLSFRQIEETHIMENIIYNELRYRGYQVDVGTVESREKDVNGKETRVQR EIDFIATLGSKKYYIQSAYAIPDKEKYEQECKSFERTMDSFKKIIIVERSMKPRYDENGY LMMGVKEFLLDGNSLLI >gi|333758476|gb|AFIH01000001.1| GENE 315 305380 - 306675 901 431 aa, chain + ## HITS:1 COG:FN1715 KEGG:ns NR:ns ## COG: FN1715 COG1373 # Protein_GI_number: 19705036 # Func_class: R General function prediction only # Function: Predicted ATPase (AAA+ superfamily) # Organism: Fusobacterium nucleatum # 1 427 1 426 430 545 69.0 1e-155 MQIRRGFYLHKIIEKKDNGRVKIITGIRRCGKSYLLFHLYRDYLLSSGIEDGQIISIALD EIDTLEYRNPFKLNDYIKEKTQDETKKYYVFIDEIQLSIAVKNPYLESDEKTVTFVDVLL GLMKRDNLDIYVTGSNSKMLSRDILTQFRDRGDEIHINPLSFAEVCEVVEDKSLAFQHYS IYGGMPYIYSLKSDEEKNRYLKDLFQETYLKDILERNKVQNDKEVMEVLLDFTSSAIGSL TNPSKLSKRFLSEKQIKISSGTISKYLEYFEEAYLLSHANRYDVKGAKYFTTPLKYYFTD IGLRNARLNFRQVEETHIMENIIYNDLIRRGYNVDIGVVEYDCKKDGKRQKIQLEVDFVM NKGHERYYIQSALHIDSKEKQEQETASLKKIDDSFKKIVVVKDNIIPRHDDAGILYIGLE NFLLDENAINL >gi|333758476|gb|AFIH01000001.1| GENE 316 307100 - 308590 830 496 aa, chain + ## HITS:1 COG:no KEGG:TDE0537 NR:ns ## KEGG: TDE0537 # Name: not_defined # Def: hypothetical protein # Organism: T.denticola # Pathway: not_defined # 146 492 1 322 324 332 50.0 4e-89 MDKLTCQMTVLFEGAFWVGVFEKTEGNRLSVAKVTFGAEPKDLEVRDFILKHFYELKFSP EVKTQVKERKQNPKRAQREVKKQLQRAGIGTKSQQALSLQHEENKQKRKEKNREQKRIEE ERQFMLKQAKKKKTQRQITKIVRNSMAALKLSLIQKYKPEKAYTYVYSTGFLSGERALTQ GAETIEEENAFMSHACPEQGVRALILTRKEEVPRAYSVLVLSETGIQEIELGEDFPDREN DPMLFSFGDSFGLIKAKKEIVYFTGDFSSPEIIPIKNGLLPFSKVLPDNARERYFQTVSD GRLIPVCFEKEVYYGLSRCFALLDFDPVKKEAKWKGFSEIEKNAFTHHDDRTKDAPKIDS LKMANEEIYAFTSGESTGSVNKWGMDYYALAKISPEGKVKEKLLESEQLKAGEKKSGVNG TFTHSDYLILTPLFNNDDWKGKQKLFSLSKREYLDITMPRGMTKHSLYNICGELCLTALY DRGLKEIGLCKIEGIE >gi|333758476|gb|AFIH01000001.1| GENE 317 308791 - 309699 364 302 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227874011|ref|ZP_03992224.1| ## NR: gi|227874011|ref|ZP_03992224.1| possible transcriptional regulator [Oribacterium sinus F0268] possible transcriptional regulator [Oribacterium sinus F0268] # 1 278 1 278 332 499 98.0 1e-139 MTEKYKIYIPEEMRLRLLNDAELFDFYKKDGSVNLNGFLKKLLLQYFDEYRETKERLLDT ILSDLSAFSSISHEDADAIADKIMNSYMRNTEFKSERNAAITLTVSGRSLDIMHSIENNM LSRVSLSQYLNDFFSSYLSISRKDRERILFQDIFEELNTAIRKNSIIRFTSTSAPKVIFT VQPYCIAASKEEQCNYLLCLDNETGIPRSFRISRIRALFSSSDKFIPNESRKLELREIAG RSPQSTSKGIEAEVRLTEKGLQKFHFITKNRPDVLKKKEILFILTGQKHSWKNISIASEK RQ >gi|333758476|gb|AFIH01000001.1| GENE 318 310119 - 310238 65 39 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MWLRWPAQGYGPGASGVQLPLLEGANTPYLTKYLVAVSF >gi|333758476|gb|AFIH01000001.1| GENE 319 310254 - 311735 1073 493 aa, chain + ## HITS:1 COG:no KEGG:Ethha_1258 NR:ns ## KEGG: Ethha_1258 # Name: not_defined # Def: hypothetical protein # Organism: E.harbinense # Pathway: not_defined # 6 493 5 485 485 585 58.0 1e-165 MFLADLRKEENLTYTENGALTNRSTNSYCLDLFATIGALRNAEDNEIISRFIKAYTEDNN MAMKILFFARDIRGGLGERRVFRSIWKWLSLHEAESVRKNITNVPEYGRFDDLLSLLDGP CEKDMLSFIKEQLDKDLAALKIGESVSLLAKWLPSVNTSNKDSVKSAKKLAKALGFSDAE YRKVLVSLRAEIKLMENYLREKDYSFSYEKQPSKALYKYRLAFLRNDRERYSAFLDKAES NPSVMNTGTLTPYDVVASIFRRDMEKEEITEEERRSMDVTWKSLPDYTGAENALAVVDGS GSMYCGWGSGYMPAAVAQSLGIYFAEHNKGCFYKHFITFSENPRLVEVQGRDIVDKLTYC VSFNECANTDLQRTFDLILNTAIQNKAKQEEIPEKLYIISDMEFDYCANHAEMTNFECAK KKFAKYGYKLPQIVFWNVNSRNQQQPVTKNEQGVALVSGTSPQIFSMLSEGILDPYSFML ETLSAKRYEGICA >gi|333758476|gb|AFIH01000001.1| GENE 320 311750 - 312844 770 364 aa, chain + ## HITS:1 COG:Cgl2945 KEGG:ns NR:ns ## COG: Cgl2945 COG1690 # Protein_GI_number: 19554195 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 8 363 1 383 383 166 32.0 6e-41 MFNIEGKVNTAVCFASVVEDCAIQQIKRMCDYEFTAGSQIRIMPDVHAGKGCTIGTTMTV HDKVVPNIVGVDIGCGMYTINLGKMEIDLERLDKAAHFIPSGMSVWGREQEKFDLEALHC YGQLKNPDRLRKSLGTLGGGNHFIEVDSSRDGTKYLIIHSGSRNLGKQVAELYQNIAIMQ HKEVSDIPEDLCYLSGEAFQDYLHDVELCQHFAKRNREMMAKIIFAKCNLSGTDAFHTIH NYIDSGEMILRKGAIAAHAGERVLIPINMRDGSILALGKGNPEWNYSAPHGAGRVMSRTK AQNELSMEEYRESMKGIYSSSINQATLDEAPMAYKSLEDILNVLENTVDIIEVLKPIYNF KASE >gi|333758476|gb|AFIH01000001.1| GENE 321 312962 - 313969 334 335 aa, chain - ## HITS:1 COG:no KEGG:Sez_0450 NR:ns ## KEGG: Sez_0450 # Name: not_defined # Def: hypothetical protein # Organism: S.equi # Pathway: not_defined # 83 322 58 299 316 92 27.0 3e-17 MHQIDLTEEERQKLRELWTSPKFKKARKAMKRSFYLEESPVLPFLILFSALPFLSILVSP ILIYLGNHFTVFQGIFLLYNKYLWGIVGSSLLAIVGLYIIAAILSIIFKIIKIPDTKEVY LNRILPPMIKIIFPKAEFDGNNNLPLNAFKKAVPIFSDYYPAGLLDLQEQPELKITDLYA YSPQKGKDRKGLYEFYGQIYTLQYHSHFEGQLRIVPTEKVWGKETNGGHFPACDGEKQID VEDILHNEHYNIYCTNEQAARKFLTPTMISWFDRQISSGLGFSLNDDRIYLIVKSDLALF TPPKNKKAWKKWNMEKTARQIKSMVASARELAEMF >gi|333758476|gb|AFIH01000001.1| GENE 322 314154 - 314294 253 46 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|331001720|ref|ZP_08325242.1| ## NR: gi|331001720|ref|ZP_08325242.1| hypothetical protein HMPREF0491_00104 [Lachnospiraceae oral taxon 107 str. F0167] hypothetical protein HMPREF0491_00104 [Lachnospiraceae oral taxon 107 str. F0167] # 1 41 1 41 425 84 92.0 2e-15 MANYNINTICVQGGYEPKKGESRVVPIVQSTTFKYETYQQICQDST >gi|333758476|gb|AFIH01000001.1| GENE 323 314378 - 314827 442 149 aa, chain + ## HITS:1 COG:PM0738 KEGG:ns NR:ns ## COG: PM0738 COG2873 # Protein_GI_number: 15602603 # Func_class: E Amino acid transport and metabolism # Function: O-acetylhomoserine sulfhydrylase # Organism: Pasteurella multocida # 1 123 256 383 422 147 54.0 5e-36 MKMTTNLMRDLGSIPSPQNSFYLGVGLETLHLRMERHYENALALAKHLEKHPKVSWVSFS GLEKDSQHELSKKYLPKGSFGVVGGRDAAVKFMDSLKLAAIVTHVADARTCVLHPASTTH RPMKGENACFVGFFTYYLLTDDLTLYYTL >gi|333758476|gb|AFIH01000001.1| GENE 324 315048 - 316319 648 423 aa, chain + ## HITS:1 COG:MT0627 KEGG:ns NR:ns ## COG: MT0627 COG1373 # Protein_GI_number: 15840000 # Func_class: R General function prediction only # Function: Predicted ATPase (AAA+ superfamily) # Organism: Mycobacterium tuberculosis CDC1551 # 13 406 12 397 411 87 26.0 5e-17 MKEYYPRVSDRLLLEHLESKGAVLIEGAKWCGKTTSAKHVAKSVIEMDSPDKTEQYQQMA RINPLNLLIGEVPHLIDEWQISGNLWNAVRYEVDQRGEFGQFILTGSSVPAGLDESMHTG TGRIVRMQMRPMSLYESGDSSGQVSLMDLFDGKDISAVNHDSIEKIAFLICRGGWPAALN RSDKIALRQAFDYYDAVVKDDISRVDNLKRNQERTKRVMRSYARNVATQSSLETIRADVI SNDIETFDKESLYGYLNALKKIFVIEDSPAWNPNLRSKVAIRTSDTRYFVDPSIATAALG IGPMDLINNLELMGLIFENLCIRDLRVYTDVLDGNVYHYRDKSGLECDAVLHLRNGSYGL IEVKLGGDKLINEGAQSLLKLADKIDTDKMKEPAFLMVLCGVAPFAYRREDGVYVVPITC LKN >gi|333758476|gb|AFIH01000001.1| GENE 325 316372 - 317256 1009 294 aa, chain + ## HITS:1 COG:BH0025 KEGG:ns NR:ns ## COG: BH0025 COG2421 # Protein_GI_number: 15612588 # Func_class: C Energy production and conversion # Function: Predicted acetamidase/formamidase # Organism: Bacillus halodurans # 1 280 2 281 300 233 42.0 4e-61 MKIIENKRIFAFDGKNECVAEVMDGETVLFRTHDCFDNQLSEEGTCIGSLNWDRINPATG PVYVQNAKAGDVLKVEILEIALDKQGVMCALPENGVLGSLVKEESVKRIKVEDGKVHFND KLVFDVTPMIGVIGVAPENGSINCGTPGCHGGNMDNKRIKVGASLYFPVFHDGAIFSLGD VHAAMGDGEVMVSGVEISAEVKVRLSVIKGIHIETPMLENEELCGVIYSHEEIEKAVFHA VRIMNERVQENLGLSFNEAGMLLSAVGDLRFCQVVDPERTVMMCVPKKIMKGLF >gi|333758476|gb|AFIH01000001.1| GENE 326 317253 - 317870 401 205 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988990|ref|ZP_01820390.1| hypothetical protein CGSSp6BS73_02415 [Streptococcus pneumoniae SP6-BS73] # 6 201 2 189 192 159 42 7e-37 MNKQNSALQQIIAEIEHLPKNQSYTERGIPPIFQFHKEAKILLVGQAPGRKVEESGIPFH DLSGKRLMEWMGISEEIFYGTSIAIVPMDLYYPGKGKGGDLPPRSFMRKYHDEIVALLPK IELRILIGKYAISHYDKKGAKLPLKELLYSFSIEDEAFSSENGSSPIDFPLVHPSPLNYG WIKKNPWFMEKNIPLLQRLVKERIN >gi|333758476|gb|AFIH01000001.1| GENE 327 318058 - 318828 523 256 aa, chain + ## HITS:1 COG:no KEGG:TDE0534 NR:ns ## KEGG: TDE0534 # Name: not_defined # Def: hypothetical protein # Organism: T.denticola # Pathway: not_defined # 6 256 25 262 263 214 44.0 4e-54 MSNETEDFEQTYETLEKENFPDGKRIRFIAELGASSDIEGHFRLICRTWKEEKNLRLESS FDRHGEEGLRFLLERLKKTEISDALLQREEASEELREAVFTAYLLAEILSQGRHREYFSS YCEELLPFLLRFSETEEDFLREKCLIALGWVAGEREIPFLTGKMLEDRDAFCRAWAASSL MQMSFHRVNGAILQEETKKDFAKAIEEEKNLQACGIMIEAAQTLFSKKWLSASALEAEDE AQIEKARRSAVRFLLK >gi|333758476|gb|AFIH01000001.1| GENE 328 319053 - 320420 462 455 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 5 453 3 450 458 182 28 6e-44 MTTKKVENLIIGFGKAGKTLANYLGNKGEKTVLVEKSPLMYGGTCINVGCIPSKFLATAA DRRSFSGGSDAEYYKNAVLQKKALIAKLNKANYDKVASNENVEVLDGLASFKDEHTVQVT NGSEVSEVYAERIFVNTGARPFVPNVPGLEVGKRIHTSETLMNLEEFPKSLAILGSGFIG LEFAASYAKFGTKVTIIDQGDRILPREDEDVAKEVFASYQGLGVDFLFGAALQQVSQDEN AVHLSYTVNGEKKELSVDAFLVATGRQANTEELHLENAGVEVSERGFIKVNEHLQSNKAH IFAMGDVNGGPQFTYISLDDFRIVKSFLDNQGSYRRNERQPVAFSAFLHPTFSRVGLSEK EAREKGYKIKVATLPVTAIPKAKILGNQTGLYKAVVDAENNQILGVTLFGEESHEIINIV VLAMMTKQPYNVLANQIFTHPTMAEALNDLFGAVK >gi|333758476|gb|AFIH01000001.1| GENE 329 320627 - 320875 201 82 aa, chain + ## HITS:1 COG:no KEGG:EUBREC_2876 NR:ns ## KEGG: EUBREC_2876 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 4 80 2 78 80 98 63.0 7e-20 MIRNTAIATATEMKNNFGRYLAMVQEGSEIIVTKNGKEVGRLIPREKAVSYLMDSLAGIL KGDTDLDKVREKRLGKKYGFNG >gi|333758476|gb|AFIH01000001.1| GENE 330 320982 - 321431 399 149 aa, chain + ## HITS:1 COG:no KEGG:DSY1739 NR:ns ## KEGG: DSY1739 # Name: not_defined # Def: hypothetical protein # Organism: D.hafniense # Pathway: not_defined # 40 121 3 84 84 91 53.0 8e-18 MLYFKKIVSSFDDIDLMIFLSDVDRVRNILSEMGELKPENPKAKYRTKRFMEFTIEGIDV DVMAGFAIVYEGNVVDCSLEKEQIVEMLPLGTESIPLQSPLLWREYYRLMERPNKVEMIN KALGDKSMETKCETVVAPCLPQKEEAEPS >gi|333758476|gb|AFIH01000001.1| GENE 331 321361 - 321864 404 167 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227873993|ref|ZP_03992208.1| ## NR: gi|227873993|ref|ZP_03992208.1| hypothetical protein HMPREF6123_2147 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_2147 [Oribacterium sinus F0268] # 1 167 1 167 167 257 91.0 2e-67 MGYYLFYLFFAFIICLAYGFSFYLYLLLELSVKQKKEVPNWFYRIGQSMQDRIHRVKLEN KTNYDALKQSRFFLRGMLLLTLFTYLFFHAKSHSISSVLFNCGRAQFVICLVMSELTHYW NLGSSPKKKRIYYSPSFAVSGCFIISSVLLLLFAVSMEQLRFHISFP >gi|333758476|gb|AFIH01000001.1| GENE 332 321972 - 322607 412 211 aa, chain - ## HITS:1 COG:no KEGG:Rumal_2015 NR:ns ## KEGG: Rumal_2015 # Name: not_defined # Def: hypothetical protein # Organism: R.albus # Pathway: not_defined # 1 210 2 213 214 192 41.0 9e-48 MKYKGIYFSLFSLFLKKPMVKKFGKDKTKESLQKGRILYREMLENTEDIGEKNPMAHNIY SAYVFLAVCRAGNFSVEDFREIIAAFMDNRFIRKAMSSIDFNKETDMKKFAERMHKAEEW AETHPEYQDKTWDFHFDEKRHKDGFYYHFTRCPLEKFARENGYLDLLPLCCDIDHIAVER NKGVLHREQTLATGGAICDYWFVGNQTKNPS >gi|333758476|gb|AFIH01000001.1| GENE 333 322975 - 323445 366 156 aa, chain + ## HITS:1 COG:FN1107 KEGG:ns NR:ns ## COG: FN1107 COG0454 # Protein_GI_number: 19704442 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Fusobacterium nucleatum # 50 155 2 108 108 129 57.0 3e-30 MATVSLKAATREDLQTVWEMQIKAFSELLDKYQDYDMSPGAEGLEKIIARYEQPWTVYYF IVAENENVGVIRVIDKKDAGRKRISPIWIMPEHRNKGYAQAAISAVEQIHGCHHWCLDTI LQEAGNLHLYEKMGYHQTGRIDKINERMDIIFYEKD >gi|333758476|gb|AFIH01000001.1| GENE 334 323545 - 324192 327 215 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227873991|ref|ZP_03992206.1| ## NR: gi|227873991|ref|ZP_03992206.1| hypothetical protein HMPREF6123_2145 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_2145 [Oribacterium sinus F0268] # 1 215 13 227 227 277 89.0 3e-73 MKHFSWILRIFHIFVLYAWIAFILLFPARPTFSLPIFILLNILFSLVFIGLLITQIVEAF KIFKREDSEQCIKAFFFFKYSSLPAVLVFLAIFLVVLLGGIGLSFVLLVLPATLFIAPFF FAMSLIVAPFFLGMSFMAGLAGLSYAICLIILSRKQKGWKVGQCIMHFILQWIPGFDILD GLYITLRYWNRGKILSIITAISVILGLTFILFMRS >gi|333758476|gb|AFIH01000001.1| GENE 335 324303 - 324863 313 186 aa, chain + ## HITS:1 COG:no KEGG:Celal_2834 NR:ns ## KEGG: Celal_2834 # Name: not_defined # Def: hypothetical protein # Organism: C.algicola # Pathway: not_defined # 6 150 11 154 193 73 31.0 4e-12 MRNICFLLIPMGIALLIFSIRKTIRFAKAELFFEMPCTEEEGSVHLPQGNYGIWLSGKRF TKSPLGKIGFQLVEEATGNRVNLAPNLMRTSVSGFREARVELYSFYVEEGNYILSINGEG SVRDRIEASIGNLLVKKPVDLSNFTVQIRKGNSIAIFFFAILGINLAAWMILGGIMLPFF LAEAGY >gi|333758476|gb|AFIH01000001.1| GENE 336 324961 - 325440 263 159 aa, chain - ## HITS:1 COG:no KEGG:TDE2454 NR:ns ## KEGG: TDE2454 # Name: not_defined # Def: hypothetical protein # Organism: T.denticola # Pathway: not_defined # 21 159 21 160 341 84 30.0 1e-15 MNFFNFEFFFGLMVGLSFLLTFYIYFRLLYGVIRKREVPQWIYKFGQAFQGRVHIEYENA TNSAALRDANLFLFLWLLVNVLTFAFLYRKNGDAHAALYQCMKMPFATIIVALIVHPILL LLRMHFSSSEDAYHIYSTTNAVRGAAFFSVFLLALYVNM >gi|333758476|gb|AFIH01000001.1| GENE 337 325465 - 326487 399 340 aa, chain - ## HITS:1 COG:no KEGG:TDE2454 NR:ns ## KEGG: TDE2454 # Name: not_defined # Def: hypothetical protein # Organism: T.denticola # Pathway: not_defined # 23 340 23 341 341 278 42.0 3e-73 MDSFRFALSFALMVCLSFLLLFYIYFRLLYGVKINREVPRWIYKFGQAFQGRVHVEYENA TTSAALRDANIFLFFWLLSNVLSFAFLYYKRGNYYAAVYQCCKLQFLIVLLAMMLHSLFQ FFRMTFHSSREARRWYSTTNALSWLAFFSGSLLASFVSTMGFPERPITAQIDGTKLVVGS TKVSSLIDAGFSFAGKSAESKVTNKRNDPFYYGEYLEITKDGKSYGFMSVTPTWKDEDAL KNCTITYYEIPGDCAQLAEVQFNKVNLTTLSFSDFQTKTITNIFSLKPANYKEIQNESYY VLTMQTKDHALWKNYSLYAYFDTNGVVFYYGIRAQQSIWE >gi|333758476|gb|AFIH01000001.1| GENE 338 326835 - 327431 377 198 aa, chain + ## HITS:1 COG:MA2782 KEGG:ns NR:ns ## COG: MA2782 COG1309 # Protein_GI_number: 20091605 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Methanosarcina acetivorans str.C2A # 1 191 4 195 201 85 28.0 4e-17 MAKTKEERRNEIIETAGKLFEEKGYEQTQVQDIVNEIGVAKGLFYYYFKSKDEVMEELAD RYADAIIDAVNKLIDKDITTFNKINRIFQIFIDSAEKKFGIFMGILNVKNGITHERIFFN VGKKMVPLVTELILSGNDNGECNCSDPKFITEFLVSGLFNIMNQISPDEKIDYLKEKLPT IKTMILKLYNFADQKESN >gi|333758476|gb|AFIH01000001.1| GENE 339 327742 - 328488 292 248 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 19 231 2 217 245 117 34 3e-24 MLSGRLYSLHSEVNILKAVTFENVSKTYNVGDSEVTALDHVSFSIEDKSVTVILGPSGSG KSTMLNLIGGMDRASSGCIRVSDTDISKLNEFELTEYRRKKIGFVFQFYNLIPSLNALEN VSIVAKMTPHSFDAKEMIRSVGLEDRCQHFPDELSGGEMQRLSIARAICKNPDILLCDEP TGALDSATGRSVLQLLTDMARKYNKTVIIVTHNASIALCANEVIHLKDGRIEFSEKNEKP LKVDEVNW >gi|333758476|gb|AFIH01000001.1| GENE 340 328488 - 330794 508 768 aa, chain + ## HITS:1 COG:lin1187 KEGG:ns NR:ns ## COG: lin1187 COG0577 # Protein_GI_number: 16800256 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Listeria innocua # 238 768 585 1136 1136 185 27.0 3e-46 MGTLFRKMLRDIWRLKSQFLSIFIMCALGMLIYSGIEGVWNGMEQEETAYFKDSNLADIW ISGLGFDNDDIGQVKELNGINETQLSAVESAYLDSDSNVNICLISNKDNKISKPLCINGN EYKPTEDGIWLDKDYADNKKIHVGDQIQIYYGEKSQKLEVKGFVYSPEYICYTGSSTSMV PDHSKYTYGFVSADTLSQIVPNAAYNQIKITTDNITDVDSLRSDLKTILNDKYMMCYDRT EYTPVSSYINKIGQIKKMSVMFSLVFFLLALLTIYTTMTRIVRKQRTQIGILKALGFHPL QIQLHYAVYGLIISIPAALLGYKLAPYTVTPVLLSLQKKFYSMPEWLGRNSYYSVILIVL LITICTLSAWISCRSIVVETPTDLLRDSGRQSQKKVFAEHFKVLWNRLSFDWRWIIRDAG QNKIRTAIGIVGVLGSMMLLMASFGLKDTINIVNSEIYGRQYTYYEKLNLSMSPTEDEVK KIESLLSGDCQWVSEQSCEARSSMSVHSERLFIIGQGYFFTTYDTDGNVLGLPVDGIILS SSSARDLNVKENGFISVLIAGKRNYLKVSQIADINSPQGIFMSQSYWESLGNTFTASALL ADDNMNLGDVKQMSVIKDSVKLKKQYSESEELLDSVQGVIILLIAAAILLSVVIQYNLGL LNFAEKYREYATLRVLGSYNTDIKSLIFKSSLIPMVTGWIIGSIAGWYFLGLYVRTVSTT TISYSPHLRLISYIIVSLIVVGCSLLIQLMVCRLTAHIDMVESLKSVE >gi|333758476|gb|AFIH01000001.1| GENE 341 331524 - 332267 580 247 aa, chain + ## HITS:1 COG:SP0526 KEGG:ns NR:ns ## COG: SP0526 COG3279 # Protein_GI_number: 15900440 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Streptococcus pneumoniae TIGR4 # 2 245 1 244 245 242 50.0 4e-64 MLKIFILEDERIQQSRIEKVIKELISRKSLSCKAPEIFGNAGQLLNAITERGSHQLFFLD IEIRGEEKKGLDIAKEIRSRDPNATIVFVTTHSEFMPITFRYKVSALDFIDKALDEEHFS ERVESAIEYTLEKLGATVSEDSFSFETAMARVQVPFHKILYFESSPTVHKVILHTKEERI EFYAGLSDLEKADSRLYQCHRSFVVNPENIVKIDKEEKMAIFENQESCLISRMKYRGLLE RMKQMKQ >gi|333758476|gb|AFIH01000001.1| GENE 342 332291 - 333598 957 435 aa, chain + ## HITS:1 COG:SP0527 KEGG:ns NR:ns ## COG: SP0527 COG2972 # Protein_GI_number: 15900441 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein with a C-terminal ATPase domain # Organism: Streptococcus pneumoniae TIGR4 # 44 431 60 440 446 220 36.0 5e-57 MESMMNLTIEYVKIVNVMLFYRQISDENMPLWSFLLVPVLFELLFFFFPPLAFFGYFVSF VLYSFYRNREKDGGLKLFYGLYPIVLESLLGRMLAFYVFPFFGISVYNEASIGGYDLLIE LLVFPLYLVLIKSLKINFQELKAGFARGFFRRFLLPINLSMMIYTVLITAFLVLRDHFSW ADSLRGQLNNLYIIIFFVILLYINAVSKERLEAEVLEQKDSELKALSEYSHHVEELYGEI RSFRHDYMNILTSLKLGIERKDFDSIENIYNTVLKDSGKPFYSSKFDLAKLSRIENDAVK SVLSAKLLEAQSKGIETSVEIEEEIYDFQIELLDFIKILSILCDNAIEGCLTAEVPKIAI ALIREERTLILVVENSTKAEKLELSPIFEKGYSSKGEGRGLGLYNVHTILEKYPKSLIST RSANHLFSQTIQFCK >gi|333758476|gb|AFIH01000001.1| GENE 343 333821 - 334489 248 222 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 7 206 17 233 318 100 31 4e-19 MFRVDEIKKSFKNKEVLKGVSFSIEEGEKVALLGNNGAGKSTLMKIIAGQLEANSGTVNT ALDYQTEIGMMPQGDILIDDLTVSDLVQLKSSMNRIAIDVDTALEKVSLQDFKKQYVGGL SGGQKRRLSLLLSILNSPKLIFLDEPTTGMDLESVDRFWKLLEKEKYTSVIVTHDFNQID HFFTKVMILKNGRIAAAESVEEIHRQGKTIEEFYREKVEKEA >gi|333758476|gb|AFIH01000001.1| GENE 344 334492 - 335208 744 238 aa, chain + ## HITS:1 COG:no KEGG:SGO_0377 NR:ns ## KEGG: SGO_0377 # Name: not_defined # Def: hypothetical protein # Organism: S.gordonii # Pathway: not_defined # 39 233 1 195 201 192 57.0 9e-48 MISMIQLKQVLRNRRFVLFTILLPLAWYMFLYNIQADMLPNIMLGIAVFIGIIGNSLATF SKRISSDIGFYSFESRFSNYGIKNYLLDQTLVQIVLNALIFVVVLGAATVFAKFPINGKL GIQFFLLTIMGIYFSVIGFVLGVRLDAKLIDTVGFPVIILAALTIIPFASFGAESGFISL VAKVQRIFPGYYYTNMMNAILSGNGIQLKDMLLFITTFVLNIIPLYFLVPKVKLSKTK >gi|333758476|gb|AFIH01000001.1| GENE 345 335256 - 336281 472 341 aa, chain - ## HITS:1 COG:no KEGG:Sez_0450 NR:ns ## KEGG: Sez_0450 # Name: not_defined # Def: hypothetical protein # Organism: S.equi # Pathway: not_defined # 122 309 98 287 316 88 29.0 5e-16 MDLSQEELKKINELQNTARFQHSWKAIRNIITWKERVQHYFARNMLLLFFCFLFGGGLML LTDEGTLPRSEFIDALMMLLARLGIFLVALQILSVLLYSLIGPGWEAKQRAKLRKLYECD ILARILQILYPSSEIDTEHDMSPNNVKEVVPISEHYIQSGILKLNDERDLKTVDLYAYSV IKGKDGYDEVTDFLGQVYSIKNTFSLKGELRIVPTEHFLLFETQGGYPGTMQDGKKIDVE DIQHNEHYNIYCTDEQSARKFLTPTVIEWFNSMTSDCKFSFYSNEARIYFANYNDRYSFA VPKDKKSLKAWRIEDAAIKLKYAVYFANEVTEMLHKNEGFS >gi|333758476|gb|AFIH01000001.1| GENE 346 336441 - 336854 404 137 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0093 NR:ns ## KEGG: Vpar_0093 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 27 118 26 115 135 78 39.0 8e-14 MEFFIAEEGVPINLGPDGGSIAYFGSEIDFQYETEAPHGDGIFSAKLPLLERTLPFWIYG RNLLFLDAYYLLVETVEKGSWSPICSMLINIHYGQYASLGQWYNSVIIEEKGIRLRNEFD GSSFFLENPKELQWNEI >gi|333758476|gb|AFIH01000001.1| GENE 347 336866 - 337156 156 96 aa, chain - ## HITS:1 COG:SPy0550 KEGG:ns NR:ns ## COG: SPy0550 COG3077 # Protein_GI_number: 15674648 # Func_class: L Replication, recombination and repair # Function: DNA-damage-inducible protein J # Organism: Streptococcus pyogenes M1 GAS # 2 78 12 90 104 57 36.0 9e-09 MKDATVSARVECNVKNEAEDILQKLGVPVSVVINSLYRQIIYNQGIPFSLTIPKEPKTLD QLSKADLNAKLSHSYNQSLRKEGRPFNEVFDEVEVL >gi|333758476|gb|AFIH01000001.1| GENE 348 337340 - 337927 455 195 aa, chain + ## HITS:1 COG:no KEGG:TDE0520 NR:ns ## KEGG: TDE0520 # Name: not_defined # Def: hypothetical protein # Organism: T.denticola # Pathway: not_defined # 1 195 1 195 195 256 67.0 5e-67 MDLIQKIKRIEQYVVENFDELDLDDPIEEGYWEEYQEIPGASQKEIEAFEKKFSIKLPKD FKAFYSYKNGSKYFSILPSVIHDVEMSFSLMSLEQMEKTKQYFQNRDALLAEFPDFFTEE EIEKMRDSRIKPYLFHKQWIPFAEYCDSCFLMLDFDPDKEGKEGQILCYIHDPDEVIYAA AGLSEFVDEIIQTID >gi|333758476|gb|AFIH01000001.1| GENE 349 338000 - 338818 480 272 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227873978|ref|ZP_03992194.1| ## NR: gi|227873978|ref|ZP_03992194.1| conserved hypothetical protein [Oribacterium sinus F0268] conserved hypothetical protein [Oribacterium sinus F0268] # 1 271 11 281 282 473 91.0 1e-132 MEAIKLPKKYRDICEEIKNGSYESLSKLEAFEKKFPHQNLAVRAGVEFFERQYEAAVSHT LLLMPFWDEWYYSNVANEYMMAMCFAAKKIGREAEVIPALHEERSRLMEAEEEKCLKGSC QRYNYCAILLNYLQQDILPESRSRDYQPPKVPKMASELIAEGKLNPEKDFDKMKLLNLLF MKGSPEDTVDYYERIKDLNLGELYYEQACICYGYLGQKDKVLEVIERWAKSKLWDVASPT QVRPMSFFMYPFMHEYLENEESLKRIREAIFG >gi|333758476|gb|AFIH01000001.1| GENE 350 338837 - 339190 328 117 aa, chain + ## HITS:1 COG:no KEGG:CLL_A2150 NR:ns ## KEGG: CLL_A2150 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_B_Eklund # Pathway: not_defined # 1 104 1 103 109 78 44.0 8e-14 MKEKTVRVIKIGKKALYEFLYENIISQEESLLQVPATEVMNHFAIDWEKGEFIFMAHQAE DADGELISLPKEIQLEILLKALPETAESLLERGKVYRDYSFEELKELCGENEDNDGK >gi|333758476|gb|AFIH01000001.1| GENE 351 339198 - 339749 310 183 aa, chain + ## HITS:1 COG:no KEGG:TDE0519 NR:ns ## KEGG: TDE0519 # Name: not_defined # Def: hypothetical protein # Organism: T.denticola # Pathway: not_defined # 1 182 1 182 183 199 58.0 5e-50 MKYRDWNEMQRKLEALYVLDNALTDPSEEYLRLIRKTEDGEKLYYHIDNGAGDSLSVIFT KKLVLVKGFAHENALNLFEKEKEEQSLVERIYAGLPEEYQNLFSAEEKRETTFFLWYDGE LHQNPLAEKDGGQWLLAYAFESFEKFRDFAKDYYEQDFSESLLRKLYEKGELSEKELEEL ISD >gi|333758476|gb|AFIH01000001.1| GENE 352 339939 - 341318 1479 459 aa, chain + ## HITS:1 COG:lin1661 KEGG:ns NR:ns ## COG: lin1661 COG0624 # Protein_GI_number: 16800729 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Listeria innocua # 5 456 8 469 470 282 37.0 8e-76 MKFLEEARAYQDNMIADLRELVKIESVRDDDAATKEAPFGPNIAKCLDKALEIGKRDGFQ VENVDGHAGVIQYGNLEESVGILGHLDVVPIGDGWHFDPLAGEIKDGYIMGRGTCDDKGP AIAAYYAMKILKDKGYKLKHNIQMILGTDEENTSAGILYYKKVRKNPIMGIVPDAEFPCI YAEKGILDFSAEGKIDSCIKSMQSGTAFNVVIGKADVIVDKPLEKEYFEKFLLANGLSGE CHQDEEGAHYHIDGKPFHASRPYMGVNAAVKMFEFVGSCYNDAFSLNAVKLFKDPYGVGL KVEYDGAYMGPLTFNLGKANIENAKVYFALDYRYPNECEGSDLLKRSADIIQEVLHIDTT LVDDSKWLLNNPDSELIKTCLKHYRAFSGDTYTPPLRIGGGTYARSFENFAAFGPIFPTR EYASWVGAEHEADEGFEIETMLLACAIYANVLYDLACEK >gi|333758476|gb|AFIH01000001.1| GENE 353 341522 - 341725 223 67 aa, chain - ## HITS:1 COG:SPy1934 KEGG:ns NR:ns ## COG: SPy1934 COG1476 # Protein_GI_number: 15675737 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 1 67 1 67 68 110 82.0 8e-25 MKNLRLKSARAGKDLSQQELADLVGVSRQTINAIEKGDYNPTIRLCLAICHVLGKTLDEL FWEEEDS >gi|333758476|gb|AFIH01000001.1| GENE 354 341734 - 341928 198 64 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGVTVWALYSVLNIMHIVDNSSPDKMWIDGRLSSRFMVPLLLSIFFAIALILMLLKNRMK NDEE >gi|333758476|gb|AFIH01000001.1| GENE 355 341892 - 342248 349 118 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227873974|ref|ZP_03992190.1| ## NR: gi|227873974|ref|ZP_03992190.1| hypothetical protein HMPREF6123_2129 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_2129 [Oribacterium sinus F0268] # 1 118 1 118 118 188 86.0 1e-46 MNYFNLGIAVGFFTVTLLVLFRNRLSKDKQDCYDERQVIVRGKGYQYAFFTTMGLLMLYA AFAEPIEKYMEAGIIPLAILLFSGLILMGYCLFHDAFWGLISKKIKEWVLPYGLYTVY >gi|333758476|gb|AFIH01000001.1| GENE 356 342532 - 343308 612 258 aa, chain + ## HITS:1 COG:MA4170 KEGG:ns NR:ns ## COG: MA4170 COG1145 # Protein_GI_number: 20092963 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Methanosarcina acetivorans str.C2A # 4 236 14 247 294 74 27.0 2e-13 MLFYFSATGNTKHVAEKIKEPQEEMISIEEACKAESYAYTVRDGRFGILSPTYAWGLPSI VYAFLEKLKLQYETKPYSFYVGTFGTTTGAASSIADSLLKEKGLALDAKFDIRMPDTWTV IFDLSNAEKVKNSLKQAEEEITELKASLSGKKKGKEMDFTVPEFVGRVAKKIYDGKIRKT KNLSVSDACIGCTLCAKKCPVQAIEMQNKKPVWVKEDCTMCLGCLHRCPKYAIYYGDGKA TNAHGQYTYQKYAGEKSM >gi|333758476|gb|AFIH01000001.1| GENE 357 343345 - 343446 156 33 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227873967|ref|ZP_03992183.1| ## NR: gi|227873967|ref|ZP_03992183.1| AAA+ superfamily ATPase [Oribacterium sinus F0268] AAA+ superfamily ATPase [Oribacterium sinus F0268] # 1 31 1 31 411 65 96.0 2e-09 MTWYPCENYLKKIRDFYHETDIIKVITGVRRYV >gi|333758476|gb|AFIH01000001.1| GENE 358 343635 - 345131 1505 498 aa, chain + ## HITS:1 COG:BS_ypwA KEGG:ns NR:ns ## COG: BS_ypwA COG2317 # Protein_GI_number: 16079266 # Func_class: E Amino acid transport and metabolism # Function: Zn-dependent carboxypeptidase # Organism: Bacillus subtilis # 8 498 8 501 501 379 41.0 1e-105 MTTKEKLQKYQDWLFKCSAYQMALNIIGIDKQTVAPEAGASYRDERSAFLAGELFSLETD SEIVALLKDLQEDPEVDAENKRAIQLYYKKAEDTLCIPKEEFVAFKKLCAESFDAWLLAK SKANYSLFAPYLKKVIESQKKLYGYRKSEKSIYNQMLDDFEPGMDEEKYDAFFAALKERL VPLIQKVTKAKQLREDFLTQSFPVEEQKKFMEGLLEYLHFDSSWGYQNESEHPFTSWTCE NDCRTTTKYLENNVISAILSTVHEVGHAYYEHNINPKYDGMILSEGVSSGMHESQSRLCE NYLGRTLAFWKYHYPKLQKHFPKQLGEVSLEEFYQAINVSKPSFIRTEADELTYPLHVLI RYEIEKGLFNGSISTEGLDKTWNAKYKEYLGVEVPNDKVGILQDVHWSDGSFGYFPTYAL GTAFAAQFMHAMRKDLNVEKLLEENRFDEIMNWLKEHIHTYGFRYEAPELMKMVTGEEFN VNYFLDYIEEKYTKLYQL >gi|333758476|gb|AFIH01000001.1| GENE 359 345142 - 345561 198 139 aa, chain - ## HITS:1 COG:no KEGG:Fisuc_2928 NR:ns ## KEGG: Fisuc_2928 # Name: not_defined # Def: nucleic acid binding protein # Organism: F.succinogenes # Pathway: not_defined # 1 133 1 134 136 135 52.0 6e-31 MKYFAVIDTNVLVSAMLKHQSVPGNILDMVFSGIITPVLNYDIESEYRDVLSRPKFHLPK DLIDDIIQTFRLYGLYIDAEPLSVSLPDPKDLVFYEVVMEQRKTEEAWLVTGNIKHFPEK VYVVTPRQMLNIILENTEL >gi|333758476|gb|AFIH01000001.1| GENE 360 345568 - 345846 242 92 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|315650517|ref|ZP_07903584.1| ## NR: gi|315650517|ref|ZP_07903584.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986] conserved hypothetical protein [Eubacterium saburreum DSM 3986] # 1 92 10 101 101 132 80.0 8e-30 MASTLVQFRTEDTEKIKSIQILEKLGLSLPAYLRMCMSRLNQENGIPFSMTLEKEYSPGI YALEKASKIAEEYGISDMSLDEINAEIAEARK >gi|333758476|gb|AFIH01000001.1| GENE 361 345997 - 346533 467 178 aa, chain + ## HITS:1 COG:CAC0738 KEGG:ns NR:ns ## COG: CAC0738 COG0847 # Protein_GI_number: 15894025 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, epsilon subunit and related 3'-5' exonucleases # Organism: Clostridium acetobutylicum # 3 158 2 158 306 105 36.0 3e-23 MARFIVFDVETPNRKNNRMSAIGITVVEEGKISKEFYSLVNPEADFDYFNVKLTGISKAS VKDAPTFPELWQQIEPLFSDGMLVAHNASFDMNVLKNCLLDYEIDWKPYARYLCTVKMGR SLFPDRSHKLNMVCEHFGIPLNHHRADSDSRACAEILLRYLEAGAEVKNFIRTCSFKK >gi|333758476|gb|AFIH01000001.1| GENE 362 346654 - 346773 84 39 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKDIIKDIIKDISKGVTKDVIKYVIIKEALSEEARKAYA >gi|333758476|gb|AFIH01000001.1| GENE 363 346754 - 347443 515 229 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|154175142|ref|YP_001407467.1| 30S ribosomal protein S12 [Campylobacter curvus 525.92] # 1 228 2 229 231 202 43 4e-50 QEKLMHREEITLCNHKLSLFQAEKEDCPLIVFHSFSDEGEAVYQELRKQNAAEYNFLSIA IHDWQREMSPWPAAALSKDGEDFSGGADVYLESLLSAILPWATERIHGKASFIGIAGYSL AGLFALYALYKTDVFTCVASMSGSLWFPGIKEFCKENAMKILPEKLYLSIGDKESKTRHP ILKTMQENTEDLLKYFKSMGIETTYEVNPGNHFQDVNLRCAKGILELLQ >gi|333758476|gb|AFIH01000001.1| GENE 364 347589 - 348248 422 219 aa, chain + ## HITS:1 COG:BS_yrrT KEGG:ns NR:ns ## COG: BS_yrrT COG0500 # Protein_GI_number: 16079782 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Bacillus subtilis # 7 198 9 191 213 81 32.0 1e-15 MLNSKGFDLWADDYDKSVGLLEEENRYPFAGYKKILGDIYKIIMEKPDAVVLDIGFGTGT LTTKLYKNGCTIYGQDFSSRMIELAYEKMPGAHLYQGDFSKGLADELKQESFDFIIATYS IHHLADAQKVVLLKDLLAHLKDGGKILIGDVAFSNRKALDQCKKEYADEWDNDEIYCVAD ELRTEFPNLIFEKRTFCSGILILAGENFALYETIGLEGK >gi|333758476|gb|AFIH01000001.1| GENE 365 348251 - 348646 335 131 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227873959|ref|ZP_03992175.1| ## NR: gi|227873959|ref|ZP_03992175.1| hypothetical protein HMPREF6123_2114 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_2114 [Oribacterium sinus F0268] # 1 119 1 119 119 184 83.0 2e-45 MSVSSFIHVNKAENKDFDLEKFNREINKKYPGTEIEQSSNVSFSYDLCWENYEEPYQFTL RMDKKRTTFAIEYFNSENRMRDYASFIVWLSLFLNQGQELILCDENNEDTLMLSANTSVE DIEEWLGQLGL >gi|333758476|gb|AFIH01000001.1| GENE 366 348662 - 349081 244 139 aa, chain + ## HITS:1 COG:no KEGG:TDE1306 NR:ns ## KEGG: TDE1306 # Name: not_defined # Def: hypothetical protein # Organism: T.denticola # Pathway: not_defined # 1 138 2 139 140 197 71.0 1e-49 MDFTQDRKSNILFGLHDSRIKKIHFQNGVLTLEPHKLFQYTEEGEKVYSGKLVFFDTDLE ECNILIFDRTVYEGEFSGKAIGLKEYMKEYAHAEFEILTEGYFGYSTTYTGWLWEKGKEP VSAILYIWNSGDMVYRIDC >gi|333758476|gb|AFIH01000001.1| GENE 367 349111 - 349233 72 40 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNEKNNEIILFETNNQEVKLSVSLENETVWLSSNQMALLL >gi|333758476|gb|AFIH01000001.1| GENE 368 349316 - 349513 159 65 aa, chain + ## HITS:1 COG:no KEGG:EUBELI_20107 NR:ns ## KEGG: EUBELI_20107 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 4 65 47 108 108 96 79.0 3e-19 MRVDGCKRIAASIFLEFLGRNDALFRNEEKVISDGALVAITLMIAESKPEEKDIMTTLVM NLLKM >gi|333758476|gb|AFIH01000001.1| GENE 369 349541 - 349969 278 142 aa, chain + ## HITS:1 COG:FN0974 KEGG:ns NR:ns ## COG: FN0974 COG0346 # Protein_GI_number: 19704309 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Fusobacterium nucleatum # 1 142 1 142 142 242 80.0 2e-64 MNKITCICLGVKDMERSIKFYRDGLGYKTDCRENNPSVCFFDTPGTKFELFPLEQLAKDI DENNPPKGNGFSGITLAYNVEHKEDVETVIALVRKAGGKIVKEPQEVFWGGYHAYFSDLD GYYWEVSWGPNFQFDENGLLKF >gi|333758476|gb|AFIH01000001.1| GENE 370 350034 - 350348 208 104 aa, chain + ## HITS:1 COG:CAC2476 KEGG:ns NR:ns ## COG: CAC2476 COG3070 # Protein_GI_number: 15895741 # Func_class: K Transcription # Function: Regulator of competence-specific genes # Organism: Clostridium acetobutylicum # 3 96 6 98 114 64 39.0 6e-11 MNEFNEFVREIFSAAGDIVIRSMMGGYLIYFNGKLIGDICDNELFLKRTPTSDKLLADSE LRYPYEGSKTLMYAFDRFEDMDLITELLKGMYAELPEKKSKKAK >gi|333758476|gb|AFIH01000001.1| GENE 371 350491 - 351333 361 280 aa, chain + ## HITS:1 COG:FN0315_2 KEGG:ns NR:ns ## COG: FN0315_2 COG3708 # Protein_GI_number: 19703660 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 131 280 1 150 151 187 54.0 2e-47 MNIIKSFNNTIDYLETVLDDEIDEKKVTQLSGYSYSMFSRLFSILTGTTLSEYIRSRKLT EAAVILRDTDEKIIDVAFKFGYESSDSFGTAFKNFHGFTPSEVRNGKPFKLVSRVQLALS VRGGRSMNITIQKKQAFTVAGVNEQSINSSLCPNVWDKLYEKYSHDELASLGSGQSMGVC HDVENPSTINYMAGYIVTDVDKARSMGLDVLEVEEAEYAVVELIGSVPDCIHNGWKYAME VFFPEHGYVHSGKPDFEYYYEGDMHSNDYKMELWIPINKA >gi|333758476|gb|AFIH01000001.1| GENE 372 351440 - 351898 213 152 aa, chain + ## HITS:1 COG:SP0950 KEGG:ns NR:ns ## COG: SP0950 COG0454 # Protein_GI_number: 15900828 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Streptococcus pneumoniae TIGR4 # 1 150 14 162 166 146 48.0 1e-35 MEEEDISRILNLENGNLQYFAYCPPKPCRETVLNDLKALPEGKSLKDKFYIGFFENDSLI AIMDFIRSFPKEDTIFIGLFMMDSKESGKGKGSAIITEALTAWKSEGYEKVRLAYMKGNM QSRSFWRKCGFTETGVEKENEQGIAVIMERIM >gi|333758476|gb|AFIH01000001.1| GENE 373 352021 - 352398 310 125 aa, chain + ## HITS:1 COG:no KEGG:CLD_3623 NR:ns ## KEGG: CLD_3623 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_B1 # Pathway: not_defined # 1 125 1 125 126 109 44.0 5e-23 MGFRIFMLIVVLLIPFTMLFFGWLLFRRTPKEINYAFGYRTKRSMRNEEKWKFANQYFGK AWYLCGLLSAPLSVIAMAIVFEKGTETVGTVGGIITMIQMIPLVGAMIPTEIALKKNFDE NGRRK >gi|333758476|gb|AFIH01000001.1| GENE 374 352526 - 352924 124 132 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|291459730|ref|ZP_06599120.1| ## NR: gi|291459730|ref|ZP_06599120.1| conserved hypothetical protein [Oribacterium sp. oral taxon 078 str. F0262] conserved hypothetical protein [Oribacterium sp. oral taxon 078 str. F0262] # 48 132 116 200 200 124 74.0 2e-27 MNTVLQSLSSPVWLRVVSTSLLQKEFMKQTGILRLTYSRAAFTVLPTFPLGIRLLQEGDY FYRIAEVEKALCDQLYTVPPLPNTKELFLHLTENLRIEESELKKLDTLKICEYSAAYHSS NIKKLCSLLRRL >gi|333758476|gb|AFIH01000001.1| GENE 375 352926 - 353108 180 60 aa, chain + ## HITS:1 COG:no KEGG:TDE1306 NR:ns ## KEGG: TDE1306 # Name: not_defined # Def: hypothetical protein # Organism: T.denticola # Pathway: not_defined # 2 59 81 139 140 83 66.0 3e-15 MSVVIEQILKNYHVDFEFLTEGYFGYSTTYTGWLWEKGKEPVSAILYIWNSGDMVYRIDC >gi|333758476|gb|AFIH01000001.1| GENE 376 353160 - 353585 212 141 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|315222598|ref|ZP_07864487.1| ## NR: gi|315222598|ref|ZP_07864487.1| hypothetical protein HMPREF0813_01362 [Streptococcus anginosus F0211] hypothetical protein HMPREF0813_01362 [Streptococcus anginosus F0211] # 1 133 9 141 147 187 75.0 2e-46 MLILCIAINVFTLWLILPDFFFPKRSVYVTKQDDYIVEIVKEYFRIEYDISKIVYQQSFP NGYSLDIYDVVGETDKEFDDTLSVAESNEIQEYFLNLKPDSSKYLRLLEAELIIEFFVIT VIIIANSRKNRRKSDTEQKAQ >gi|333758476|gb|AFIH01000001.1| GENE 377 353852 - 354049 109 65 aa, chain + ## HITS:1 COG:no KEGG:EUBELI_20107 NR:ns ## KEGG: EUBELI_20107 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 5 65 48 108 108 87 73.0 2e-16 MRVVGCNRIAASIFLEFLGRNDASFRNKEKVISDGALVAITLMIAEFKPEEKDIMTTLVM NLLKM >gi|333758476|gb|AFIH01000001.1| GENE 378 354081 - 354863 181 260 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|251780850|ref|ZP_04823770.1| ## NR: gi|251780850|ref|ZP_04823770.1| hypothetical protein CLO_0918 [Clostridium botulinum E1 str. 'BoNT E Beluga'] hypothetical protein CLO_0918 [Clostridium botulinum E1 str. 'BoNT E Beluga'] # 17 253 1 226 236 188 44.0 4e-46 MIIDKKEDLLRCIRNELVPENPKVKHTGIKGLLEYRLNNNISHPDSIYKGYDKHKCKYYG ESKTSDYFRAIYNIDPFKIGSSDTIFNCWSFASRFFNGVVGYTVSEKDVLFELEKYFIAY DSIKLKLDKLADYHHCLSNFMPAPKGFNGYSFIDNRTNKKYEQDGKGNYYRDNDFPDIFY KRAKNDDKLYQYYRWINKNMDSFCLDFFKKFESYLSDCEANHPVDVNNEKDLENFEKGLD NAIKCIEIRAEELFRKMKSL >gi|333758476|gb|AFIH01000001.1| GENE 379 354983 - 355747 207 254 aa, chain + ## HITS:1 COG:SPy1869 KEGG:ns NR:ns ## COG: SPy1869 COG2820 # Protein_GI_number: 15675688 # Func_class: F Nucleotide transport and metabolism # Function: Uridine phosphorylase # Organism: Streptococcus pyogenes M1 GAS # 53 234 35 226 259 60 27.0 3e-09 MIIKNEIPILEYDNFSIEVIKPNHGCEELKLPEKCVFAFLGDCVDEFAMNSNAIIAEEFE NCCRTTNIYVIEYKGQRICLVRPNIGAPASVQLLDRLIACGCKKIIATGSCGVLRDIKEN AFLIPTKALRDEGTSFHYLPPSRYIEIDRKMIGEIKDVFEKLDIPFEECITWTTDGFFRE TREMVQYRLSEGCSAVEMECAALAACSQKRGASFGQFFFTADSLASVTEHDERNWGISSH SRALHLALNLICNI >gi|333758476|gb|AFIH01000001.1| GENE 380 356025 - 357401 536 458 aa, chain + ## HITS:1 COG:no KEGG:bpr_I2658 NR:ns ## KEGG: bpr_I2658 # Name: not_defined # Def: FAD dependent oxidoreductase # Organism: B.proteoclasticus # Pathway: not_defined # 1 454 35 483 521 319 36.0 2e-85 MPGGECAGWNRQGYHIDNCIHFLVGCNKDEQLYKMWENLGVLSDSLEIYREPYFYCMEMD GVTLHLWRNLEKARKEFLELAPEDTKELNLFFDCAKSLECIKPPCDISIAHMNLIQFIKL GMSMKDANKAIKEYGKQSMEDFTNRFTNHYIRAIFKNYFNRNFIALSFVASYAFYTSNTA AIPEGGSVGLVSRMLAKFESLGGKLHLGVNIEKINIADKQVVSIIGNNGKVINSDNYIWC ADPHSLFYDLIDEGYLDKNLRYMYENPEGYVSNTGYQVAFGIVTEADLKLPEGSIIFPCD EYDVAGETHNFCGMRVYDYDETLFPMGKRVIQCNVLQNAENYAYWFGLKDNKEKYNQEKQ RIAEELRLRVEKKFPQLEGKLIVLGTYSPVTFTTWCNAYKGGYMSFNPQKGYKSKYVKSI IKGINNLYLASQWIQTGGGLPIAAASGKFAIDNMKSHR >gi|333758476|gb|AFIH01000001.1| GENE 381 357450 - 358832 653 460 aa, chain + ## HITS:1 COG:CAC0528 KEGG:ns NR:ns ## COG: CAC0528 COG0488 # Protein_GI_number: 15893818 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Clostridium acetobutylicum # 1 429 1 429 492 419 50.0 1e-117 MSTIKIENLTFSYYGYVKPVFENVSFSFDTNWKTGLIGRNGIGKSTLFKLLLNQEVYQGK ISKSVDFIKFPPNLSDTSKLGIELYKELISDEEEWKLFRELNLLNVDESLVYRKFETLSK GEQTKILLAILFTREDGFLLIDEPTNHLDMDGRKIVSEYLKSKKGFLLISHDRDFLDGCI NHVISLNRNSIDVQSGNFTSWYENKLMKDQFEISQNEKLRKDIKRLKEAARQSHIWSDKI ENTKNAVKVSGVKPDKGHIGHQSAKMMKKSKNLEHRQNKAIEEKQNLLKDIETKESLLLH TLDYHKNPLISVRNLSLCYGERQILSDVSFDIKRDDIVAIYGGNGSGKSSLIKILLGLHH EYSGDVKLASNLKISYIPQDTSDLTASLNEYIESQGVDETLCKTILRKLDFARELFETDM KNYSDGQKRSFNCRKLIKAGSYICLGRTVKLYRCNIKNTD >gi|333758476|gb|AFIH01000001.1| GENE 382 358723 - 358926 63 67 aa, chain + ## HITS:1 COG:CAC0528 KEGG:ns NR:ns ## COG: CAC0528 COG0488 # Protein_GI_number: 15893818 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Clostridium acetobutylicum # 3 67 428 492 492 83 56.0 1e-16 MDKKEVLIAVSLSKPAHIFVWDEPLNYIDVISRIQIEEIIKEANPTLIFVEHDKRFVEDI ANKIIRL >gi|333758476|gb|AFIH01000001.1| GENE 383 359271 - 359804 444 177 aa, chain + ## HITS:1 COG:no KEGG:Rumal_3781 NR:ns ## KEGG: Rumal_3781 # Name: not_defined # Def: GCN5-related N-acetyltransferase # Organism: R.albus # Pathway: not_defined # 4 176 7 179 179 240 65.0 2e-62 MGDVILEQLAPDDREQFILDNQEAFNYGAMVEFGLRDNRFEEDGQIISRKTIERSIDDGK AYRIIYNNKKVGGIVINVNGEKGELDLLFVAPNVHGKGIGYAAWCEIEKMYPQVKVWETV TPYIEQRNIHFYVNRCGFHIVEFFNKYHPDPNETDSMGEEIDSQFQDGMFRFEKKID >gi|333758476|gb|AFIH01000001.1| GENE 384 359881 - 360342 278 153 aa, chain + ## HITS:1 COG:no KEGG:TDE0517 NR:ns ## KEGG: TDE0517 # Name: not_defined # Def: hypothetical protein # Organism: T.denticola # Pathway: not_defined # 1 153 1 152 152 200 62.0 1e-50 MLKIKDFTFQEDWGGRRSCLMFFKADQEESASWAVDIGFKPGEFEGNEISPSICINPIDT DKSDVKELVGTTFSVKTVEESEEREDSFYIYENEPLIEYRIEVLDIVEAKAHIKCNGVLI LDGYAEPWIEEKFEIDSWVPVIESVQDWDKLAL >gi|333758476|gb|AFIH01000001.1| GENE 385 360339 - 360479 140 46 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227873936|ref|ZP_03992155.1| ## NR: gi|227873936|ref|ZP_03992155.1| conserved hypothetical protein [Oribacterium sinus F0268] conserved hypothetical protein [Oribacterium sinus F0268] # 3 41 145 183 209 67 87.0 4e-10 MTEEAIRRLAALKEDSGKYVRKSVGNALRDISKKFPDFIQKCFIFT >gi|333758476|gb|AFIH01000001.1| GENE 386 360531 - 361094 419 187 aa, chain + ## HITS:1 COG:no KEGG:Fisuc_2783 NR:ns ## KEGG: Fisuc_2783 # Name: not_defined # Def: hypothetical protein # Organism: F.succinogenes # Pathway: not_defined # 8 177 15 184 191 147 45.0 2e-34 MLLEELSEYGSPKSKLSRMAKSGECFPITKGLYETNPHTPAYLLAGSIYGPSYISFEYAL SFYGLIPEAVYTVTSATFEKKKKKKFETAFGTFSYRDVPSKAFPLGIRLIQEGEYFYRIA EPEKALCDQLYTIAPVGNTKELFRLLTESLRIEESELKKLDASKVCAYSAAYHTTNIKKL YSLLRRI >gi|333758476|gb|AFIH01000001.1| GENE 387 361096 - 361962 493 288 aa, chain + ## HITS:1 COG:no KEGG:Fisuc_2782 NR:ns ## KEGG: Fisuc_2782 # Name: not_defined # Def: hypothetical protein # Organism: F.succinogenes # Pathway: not_defined # 1 286 1 286 287 334 54.0 2e-90 MNTVIEEMLKSYQVDNIYDRKNAMKEIMQEIVLCGLSRAGFFKEAAFYGGTALRIFYGLD RFSEDLDFSLEQINLDFDLCSYFPVLEKEVKAFGLNVEIQEKEKTKDSNIRSAFLKGNTK EHLLLFYADERLVGSVAKNEVVKIKFEVDTNPPAFATYEHKYRLLPVPYEIRLYDMPSLF AGKIHAVICRGWQSRIKGRDLYDYIFYLSKAVTVNQKHLRARLIDSGYISENQECTLEEI KTMLKNRFDSIDFLQARKDVEPFIRDTSVLDIWSSDFFKQITEGLKVL >gi|333758476|gb|AFIH01000001.1| GENE 388 362054 - 363013 262 319 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0868_1194 NR:ns ## KEGG: HMPREF0868_1194 # Name: not_defined # Def: AraC family transcriptional regulator # Organism: Clostridiales_BVAB3 # Pathway: not_defined # 1 317 1 317 402 431 65.0 1e-119 MELNKNNVIENAYDKLFFTEKKQTKDIQIYCLNNDTGTGEMRCYNLLEGIQLSYNTLNMQ TTYQKIEPKEGMLQIDHCLEGCYEFILENNEHAFLGRGDLSIVDLGKASFKKSCIPMKKY VGLSLFIDINVAQKSIDQYFPYGNIDLHRLRDRLCKNGVSLIIRSRDGINHIINELYEVD ERVKLPYSIIKTIELLLFLSLIESKDTEQFSSFSEPIYRATQECYKMIIENPFEWLKIKD LAKKFAVSESSLKNCFQCISGQSIGAFMRTNRIKEAAILLHKKPYLSIGELAKMTGYENQ SKFSKAFKSIMGKTPSEFK >gi|333758476|gb|AFIH01000001.1| GENE 389 363191 - 363418 253 75 aa, chain + ## HITS:1 COG:no KEGG:FMG_1416 NR:ns ## KEGG: FMG_1416 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 1 67 5 71 196 76 64.0 3e-13 MKLKDIIQITVFTVIAFVLGMAVSMGTGMLGTVSLYVASGFSALVIAPPFVVMAKKLRKN LLLLSFLCCCLFFGH >gi|333758476|gb|AFIH01000001.1| GENE 390 363418 - 363768 200 116 aa, chain + ## HITS:1 COG:no KEGG:FMG_1416 NR:ns ## KEGG: FMG_1416 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 2 102 82 182 196 129 72.0 5e-29 MGYWPMLIINLVAGIVAELIIGNYESDKRVAVAIATGMFIISMHAMTFVKVLGPEKLVEV FTVFSPEQAQYMYTFFTPKAMLISIIVNIVLVTLAGLFGMYINNKFFEKRKEKGIL >gi|333758476|gb|AFIH01000001.1| GENE 391 363768 - 364448 242 226 aa, chain + ## HITS:1 COG:no KEGG:FMG_1415 NR:ns ## KEGG: FMG_1415 # Name: not_defined # Def: ABC transporter permease # Organism: F.magna # Pathway: not_defined # 8 224 8 224 226 188 54.0 2e-46 MQKNTVKETCIVNSIVLFILIVSFSITLFITDKLGYYIMMSVSFILLLTHSKKAFLSMSV KYLFLLLLLHLLEKLPYRLGVASFIGLLLIGIKLFPIFVLGRILISLSPLTIMSSLRKIG IPNDFNLSITTGLRFMSEMEIRIKEIRNGMKVRGLRISLVHPVRSFELYLIPLMYKCLHV SETLTSSIISKGAEYEIKKQVTIQLNIIFLDLICLVVAFYLVWRLF >gi|333758476|gb|AFIH01000001.1| GENE 392 364465 - 365082 279 205 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 11 203 137 325 398 112 34 9e-23 MKILEVKINQFKYKNSKEIILKNLSLSVEPGELIVITGLSGCGKTTLTRILNGLIPNHYE GDLDGEVKLFDKNLLDYEKGELAKYIGNVFQNPSDQFFATIAEEEVAFVGENLGMPLEEL KQKTKEAFEKMGISNLMEKKLSELSGGQKQKVAIASTLLYDTKIIFFDEPSSNLDYQGIV QFRNIVCTLREMGKTVVIAEHRLFF >gi|333758476|gb|AFIH01000001.1| GENE 393 365022 - 365909 480 295 aa, chain + ## HITS:1 COG:SPy1787 KEGG:ns NR:ns ## COG: SPy1787 COG1122 # Protein_GI_number: 15675626 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, ATPase component # Organism: Streptococcus pyogenes M1 GAS # 19 269 203 462 464 107 30.0 3e-23 MYFERDGKDGCYCGTSIVFLNDLYDRLIYMKDGTIERIFSRGELKEDDCKKYGLRAIRYQ SLKAQNSDEEQEKVAEIVDLNINIGKQELIKNLSFDLHYGEIMAIIGKNGIGKTTLGRTL AGLIKNKGEISYGKTTKERLKQSYYMMQDVDYQIFFDTVENELIPKNKVKDREYLKEVTT YIHAIDLWDKKMDHPQELSGGQKQRLALATAFLSERKIIILDEPTSGLDYKRMKEIGAMI RKYAAKRPVVIITHDLELLFEVCNTVLMLDDKTYKKIPVKGNESKISDFLFAPIR >gi|333758476|gb|AFIH01000001.1| GENE 394 365941 - 367668 225 575 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 330 551 279 507 563 91 30 2e-16 MNLIKQYVKEYKNTYIQSVLLAVLGVVSGLAAYILLAKMIVGLIGKNTEFGFYLQYGLMI LAAIVLKEIFAAASTSISHQATFYSLKKIREEISTKLFRMPLGKVMNISSGKLKNIIVDQ VDSMETTLAHIIPEMTANIIGPILLLIYMFILDWRLALVSLIPLVIGMFCMKSVMASYGK KYQQSVEINQKMNNAVVEYIGGIEVIKMFNQSETSYQKYSEAVHENAAFYYHWMKETMIG VSAYRKISPMSLLTILPLGVYFYLNGSLTIATFITIIVLSFGTVENILTATNYMDDLSRI GTITKEIGLILDAPDLEHGKGNVSLSGSDIELKNVDFSYTEDKKVLEGVSLTIGENQVTA FVGPSGGGKSTITKLIAGFWNADAGEVIIGGKNIKEIPLEQLSETISYVSQDNYLFDMSV RENIRIGKPSASDKEVEEMAKLSGCDEFIRGLSAGYDTIVGEGGGHLSGGEKQRISIARA MLKNAPIVILDEATSYMDTENESIVQEAISNLVKGKTLILIAHRLRTVVNADKIFVVENG KIESCGKHEELLETSKVYSSLWKAAGKEERYDYSI >gi|333758476|gb|AFIH01000001.1| GENE 395 367652 - 369388 1396 578 aa, chain + ## HITS:1 COG:SA2216 KEGG:ns NR:ns ## COG: SA2216 COG1132 # Protein_GI_number: 15928006 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Staphylococcus aureus N315 # 20 576 16 577 577 425 40.0 1e-118 MITVFKKIWNFAEKEQPNIRKSIIVGFLCAAFNAMQMGGVYYVLVKIFDETLSVKDIAVV LGILLVSLVGKIITQYISQLEQTHAGYFMAADKRIRIGNKLKRVPMGFFSEFSLGKITTM STTTLSQIEMQVPMLLVLVLGGLLNTFVFALALFYLHIMVGITAFLGILAFFIVTYFMEK KSRENASEIGIAQTHLTKQVLETVQGMQVIKSYNLGGKNNKELSNAFEENCNITMKLEKT MTPYIALQRIVLGISIAAIIILSAKYYIEGDMLLADAIMSMIAGFIIFEGIKAAGSSMAI LRIAENSIDSLKYLEKIPEIKEGAETSPIRHPDIEFKDVSFAYDEKTILDHISCEMKKNT MTAIVGPSGSGKTTFCNLIARFWDVNAGEILMGGKNIKEYTLPNLMSHIAMVFQNVYLFE DTIENNIKFGVPSATREEVIEAAKKAMCHDFIEALPNGYDTLIGEGGATLSGGQKQRISI ARAMLKDAPIVIFDEATANIDPENEDKLKAAIEELTKNKTIIMIAHRLSTIRNADQILVL NNGKIEQRGNHEGLMKQGGLYKTLISMKNKATIWKIAN >gi|333758476|gb|AFIH01000001.1| GENE 396 369408 - 369518 164 36 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKLFQAVISFFILELGGNLQLLALSTVAKGGFTVLL >gi|333758476|gb|AFIH01000001.1| GENE 397 369624 - 370370 316 248 aa, chain + ## HITS:1 COG:CAC1471 KEGG:ns NR:ns ## COG: CAC1471 COG1893 # Protein_GI_number: 15894750 # Func_class: H Coenzyme transport and metabolism # Function: Ketopantoate reductase # Organism: Clostridium acetobutylicum # 1 200 1 204 319 69 28.0 7e-12 MRLLIFGPGVIGSLYASLFAEAGFDTTVYARGARLETLKKKGLLYLKREKVTKANVSVLS ELKDNDEYDFIFLTVRENQLYQALEELKTNNSKCIVTMTNSMDDYNEWEKICGKGKILPA FPGAGGRIKDDILDAMLTPKIIQPTTFAEISGMRTDRVRRLSLIFKQSSIPYHIVKDMHI WQLCHLAMVVPIADAYYEADNPAKAGYEHKTMCKTAKVLKRNLQLVRKTCGKLSPWKMNI FCLCRYRY >gi|333758476|gb|AFIH01000001.1| GENE 398 370555 - 370749 91 64 aa, chain + ## HITS:1 COG:no KEGG:CLI_1025 NR:ns ## KEGG: CLI_1025 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_F # Pathway: not_defined # 1 62 1 62 126 70 53.0 2e-11 MGFWIFMLIMVLLIPLTMLFFGWLLFRKTPKEINYVYGYRTKRSMMNEETWRFANQYFGK AWYL >gi|333758476|gb|AFIH01000001.1| GENE 399 370844 - 371464 556 206 aa, chain + ## HITS:1 COG:no KEGG:SmuNN2025_0027 NR:ns ## KEGG: SmuNN2025_0027 # Name: not_defined # Def: hypothetical protein # Organism: S.mutans_NN2025 # Pathway: not_defined # 1 204 1 204 206 266 68.0 3e-70 MKEYIAALEQEFSSIENGFKTEESRALQDFHSHDFAYCKTLAFAAFQSPAYQVRMYGVFL FGYLSEDEEILHFMKEEVTKDENWRVQEILAKSFDTYCKKIGMEKALPTISEWLQSPEPN ARRAVTEGLRIWTSRAYFKDHPEEAIQRLAALKEDPSEYVRKSVGNALRDISKKFPDFIR KEVEAWSLDSKEIKQVYHLASEFIKD >gi|333758476|gb|AFIH01000001.1| GENE 400 371526 - 372263 198 245 aa, chain + ## HITS:1 COG:MTH623 KEGG:ns NR:ns ## COG: MTH623 COG1266 # Protein_GI_number: 15678651 # Func_class: R General function prediction only # Function: Predicted metal-dependent membrane protease # Organism: Methanothermobacter thermautotrophicus # 1 232 4 247 272 82 28.0 5e-16 MNSKRLAKFLIITFLISWIAWCGLAALTSLNIIPFSHPLGTILHIIGGFGPAIATLFVLE EKNTIKSIVKYIFEHRKKSLNYLFLFSVFEVLTISLSSREFNAALKMHLIPLIFLQATFI YGGEEELGWRGVLQPLLEKQLNFPISAIITGTVWGIWHIPLWFINGSSQQNMPFTLFLVL AIILSFWLATIYKKTKCIFACSVFHGLTNTLLSMFIIKLNIILIIGVIAMLIYSICIWYY GEAKS >gi|333758476|gb|AFIH01000001.1| GENE 401 372294 - 372521 258 75 aa, chain + ## HITS:1 COG:no KEGG:TDE0510 NR:ns ## KEGG: TDE0510 # Name: not_defined # Def: hypothetical protein # Organism: T.denticola # Pathway: not_defined # 1 75 1 75 222 92 60.0 5e-18 MDLWDQIKNNTELHTMLMRECDICFYKQLQEIQFMENNENYSMQAKAFAHDASGGEFVLL QDESIGFIGSEGEVG >gi|333758476|gb|AFIH01000001.1| GENE 402 372588 - 372758 123 56 aa, chain + ## HITS:1 COG:no KEGG:TDE0510 NR:ns ## KEGG: TDE0510 # Name: not_defined # Def: hypothetical protein # Organism: T.denticola # Pathway: not_defined # 1 55 156 211 222 84 67.0 2e-15 MQFYKAAIREPLFSCKYMDGTEEYTCDSLLSDTVGMWVKELSGMTKEEMENNHEPL >gi|333758476|gb|AFIH01000001.1| GENE 403 372745 - 373557 646 270 aa, chain + ## HITS:1 COG:no KEGG:Acfer_1144 NR:ns ## KEGG: Acfer_1144 # Name: not_defined # Def: hypothetical protein # Organism: A.fermentans # Pathway: not_defined # 1 270 1 270 270 306 56.0 5e-82 MNLYNWIQKVFFETYEEWHMKDPNYDRNGFHIIGIDNSLKAMHDGYTTYAEISPSHAVKG CTSMKAVVGKSKELVNLYLKIEDKKYLISDLSYSDAVKIMRAFVKKEVLPDEKTYTEVIG NDDAIVKSAFEELTKLLLADPQTAKRFLKKHKHESMEDMDHAWEELFFALERKGKLIELD WKARKDSFIPAVRKLSAGLNLNPNEKILNDEEDIPRWGKILNAQWTEYVLSAMDIGSDSY AMMVLSKEDFEKARELAKVILHRIAVIEEM >gi|333758476|gb|AFIH01000001.1| GENE 404 373608 - 374018 268 136 aa, chain + ## HITS:1 COG:no KEGG:Fjoh_0899 NR:ns ## KEGG: Fjoh_0899 # Name: not_defined # Def: hypothetical protein # Organism: F.johnsoniae # Pathway: not_defined # 20 129 30 138 148 82 42.0 6e-15 METLNSIIQKMEACIQDNDDLETVMMDCMEEIEENYNQLDSVQPLLRLMERHPLTDFGSP GPIVHFVERFYKKGYEEELLLSIKRMPTLHTVWMLNRLINGTDQAEIYLDILNGISENAS CDKEIREEALHFLSIH >gi|333758476|gb|AFIH01000001.1| GENE 405 374135 - 374899 334 254 aa, chain + ## HITS:1 COG:no KEGG:SmuNN2025_0272 NR:ns ## KEGG: SmuNN2025_0272 # Name: not_defined # Def: CAAX amino terminal protease family protein # Organism: S.mutans_NN2025 # Pathway: not_defined # 4 241 10 247 248 265 57.0 1e-69 MKAFLFPTLLHITAVAVLVGILKEKGYGLGYHSFWGMVFIIIGGVSSAFWGVFYQIKYNG KNPLCIIKDFFKIKQPFKIYAMAIVFLIIDFCSVAISKGFKIENVWISIALFFKAILFGG IEEIGWRYSFQPCLEKKLSYIVATVITFVCWGVWHFLFFFIDGSIVTVDVLNFSLGLFTN CFILSALFAYSNSLWICVMTHALINTLSQINFHDNVIIGNASKVICIVVAILLVHATKKA KYSLMKDDNASTGG >gi|333758476|gb|AFIH01000001.1| GENE 406 374988 - 376022 851 344 aa, chain + ## HITS:1 COG:MA2994 KEGG:ns NR:ns ## COG: MA2994 COG4804 # Protein_GI_number: 20091812 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Methanosarcina acetivorans str.C2A # 15 343 6 328 345 179 34.0 8e-45 MDYIESEVNRVLMNSSEYISIVEKIKSEITSAQYRAAVHVNADMLLLYYDIGCVINEHKT WGNKFIDNLAADIRMAFPESKGYSVRNLKYMAKFAEAYPNREFVQQVVAQIPWGHNVVLL DKVSDAKERGWYIKKSAENGWSRNVLVHQIESGLYQRQVLVDKVSNFESRLPSPQSELAT QTMKDPYVFDFIPFREEMLERDIEQALVRDVTKLLLELGTGFAFLGNQYHLNVGGDDFYI DLLFYNLNLRCYVVIELKTGDFKPEYAGQLNFYLSAVDGILKKEEDNPSIGLLLCKSKNN LVAEYSLKDISKPIGVSEYKVTRSLPDALEEQLPSVEDIQKRIK >gi|333758476|gb|AFIH01000001.1| GENE 407 376024 - 376350 179 108 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_2368 NR:ns ## KEGG: EUBREC_2368 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 9 98 3 95 101 72 43.0 4e-12 MSRKPVFDSILSGLNEALEDAKKETPALKRHRITVIPLKVYEANDIKKIRTSTGLSQKYF ASYMGVSIKTVEAWEAGINQPSGSSSRLLHMMELDNELIEKYPFVSKA >gi|333758476|gb|AFIH01000001.1| GENE 408 376343 - 376693 327 116 aa, chain - ## HITS:1 COG:VCA0468 KEGG:ns NR:ns ## COG: VCA0468 COG2026 # Protein_GI_number: 15601229 # Func_class: J Translation, ribosomal structure and biogenesis; D Cell cycle control, cell division, chromosome partitioning # Function: Cytotoxic translational repressor of toxin-antitoxin stability system # Organism: Vibrio cholerae # 1 107 1 106 110 60 30.0 5e-10 MTRTFIQTNEFSKNWDSLDFDDEDLRLLELSILEDPEKYPIMKGTGGLRKARISLDRKGK SGGARVCFVDFIFVETIYLITVYGKKEKDNLSKAERNLIKKMIDTLKKTLWEVNNE >gi|333758476|gb|AFIH01000001.1| GENE 409 376904 - 376987 69 27 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLEWNYVLEFYWIAFSVLKIGENAFSL >gi|333758476|gb|AFIH01000001.1| GENE 410 377247 - 377579 283 110 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227873926|ref|ZP_03992146.1| ## NR: gi|227873926|ref|ZP_03992146.1| conserved hypothetical protein [Oribacterium sinus F0268] conserved hypothetical protein [Oribacterium sinus F0268] # 1 109 28 136 136 168 88.0 1e-40 MPEAKDITEIEITENPSGNTVKITEQDEIAKIVNDIKENTKDTGGKSYNEHPANIKKFLA VSFYYNNTERNWEVVYLYENRNKTYAEQPYSGIWKIKKEVFKEISGKLKQ >gi|333758476|gb|AFIH01000001.1| GENE 411 377690 - 378073 404 127 aa, chain + ## HITS:1 COG:no KEGG:EUBELI_00410 NR:ns ## KEGG: EUBELI_00410 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 6 126 90 210 217 180 82.0 2e-44 MEHDIRNKIIIILSYLLIWALAMIVFWFFTSGSDAMGYSLMYLWIILPVTTFVESVLIGK NDFFGKGKWGFTLFFGLMYMLAEYGTFKMANNIASNKLNAPDFGMIVAGVIISAIGILLG SLWKKKH >gi|333758476|gb|AFIH01000001.1| GENE 412 378090 - 378635 475 181 aa, chain + ## HITS:1 COG:SP0830 KEGG:ns NR:ns ## COG: SP0830 COG3797 # Protein_GI_number: 15900717 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 2 178 3 179 180 166 46.0 1e-41 MRYILFLRAVNVGGKNKVSMTDLKALLDNAGFENLDSYINSGNLFFSSAESREACILKIR KVLETNYDFSIPFALLTKEEYLEEQAALPAWWEEELARRDVLFYSCGMDKSGILHFIENS TFYNEKVYVGKQAVFWGKMDEAEYLKTTYHKKLMKQDFYKQITIRNGNTFDKIAEILRSS E >gi|333758476|gb|AFIH01000001.1| GENE 413 378563 - 378799 60 78 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLISSRKFPKVQCVFKKHSPAYKFYLIIVFPLGFPNILTRYNIFKLSGKSRSYYFYSELL KISAILSKVFPFRIVICL >gi|333758476|gb|AFIH01000001.1| GENE 414 378975 - 379190 191 71 aa, chain + ## HITS:1 COG:no KEGG:Fisuc_1292 NR:ns ## KEGG: Fisuc_1292 # Name: not_defined # Def: hypothetical protein # Organism: F.succinogenes # Pathway: not_defined # 1 71 1 71 71 90 56.0 2e-17 MSPEIFSFVIYMIHACANRWSKTAAKVYIALKQSGCLNHYLVPNYDILHTQSTDFVVQDI EEYLAQKEVIV >gi|333758476|gb|AFIH01000001.1| GENE 415 379187 - 379669 465 160 aa, chain + ## HITS:1 COG:no KEGG:Fisuc_1291 NR:ns ## KEGG: Fisuc_1291 # Name: not_defined # Def: hypothetical protein # Organism: F.succinogenes # Pathway: not_defined # 1 157 1 158 159 210 62.0 2e-53 MIVFHGSNQRVENPDVKHSLRNLDFGSGFYVTTVKEQAEKWAKRRADLVTGSPIINSYEL SLDKTDFNVKDFGEDLNSWIDFVCNCREGKKDYLQFDIIIGKVANDKVFRVVDMYHQGIW DKERAIKEIRVYPNYDQIAFISQRSIDELLEFVLAEELTP >gi|333758476|gb|AFIH01000001.1| GENE 416 379666 - 379881 338 71 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227873895|ref|ZP_03992116.1| ## NR: gi|227873895|ref|ZP_03992116.1| hypothetical protein HMPREF6123_2055 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_2055 [Oribacterium sinus F0268] # 1 71 1 71 76 94 88.0 2e-18 MTEEALEQFYQESLEERLIQNIAKELHLSLEEAMDCYYKSRLAGMIQEGKEGVQYLDYRA LTALFMEMEKV >gi|333758476|gb|AFIH01000001.1| GENE 417 380014 - 380157 98 47 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRTQNLNMCVFFDYFEIMSIIKIRYIEEYCVFDILRSRYIDGYSKSS >gi|333758476|gb|AFIH01000001.1| GENE 418 380135 - 380740 403 201 aa, chain + ## HITS:1 COG:no KEGG:TepRe1_1844 NR:ns ## KEGG: TepRe1_1844 # Name: not_defined # Def: hypothetical protein # Organism: Tepidanaerobacter_Re1 # Pathway: not_defined # 5 199 5 198 198 124 31.0 3e-27 MDIQNQVKNIIIQQGGIAKSVDFVAAGISAIQVVSLCNVGFLERVRHGYYSLANHDTVSE EQMLAKLFPKGIVCVESALFHYGYCDFTPRRWSIAVPRSMSRTKLGDNILRLQVYYVQQD IYELGKIYDTFNGVMLAVYDRERTLCDCFKYRARLDTETFNKALNAYANDPGKNLQNLSI YAKSLHVYKKVTELMEVLLNG >gi|333758476|gb|AFIH01000001.1| GENE 419 380733 - 381635 472 300 aa, chain + ## HITS:1 COG:no KEGG:GK3178 NR:ns ## KEGG: GK3178 # Name: not_defined # Def: hypothetical protein # Organism: G.kaustophilus # Pathway: not_defined # 3 297 6 302 303 191 37.0 3e-47 MADISTSVLARLKNKAAESGRSYQLCLQLFCQEEFLRRLEKSKYAENLVLKGGLFIYSLT EFDSRVTVDVDFLLRRIPNTPEQLKAILEEIIVTDTGNDFITFEIKNVAPIAVAKKYAGI GASLVAKIKNTKTPFSIDFGVGDVIVPKQEKRKIPTQLDDFNAPMVNTYSLETTIAEKLD AILSLMEFSSRMKDYYDLYYLANKFDFDGATLTKALNKTFKNREHHFTVEQFEQIMTFGR DDTMQKKWKAFCRKIDTKTDDFITVLKTIRKFLSEPYNAAVENKEFVETWTASNGKWNSN >gi|333758476|gb|AFIH01000001.1| GENE 420 381710 - 381973 128 87 aa, chain - ## HITS:1 COG:CAC1483 KEGG:ns NR:ns ## COG: CAC1483 COG1733 # Protein_GI_number: 15894762 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Clostridium acetobutylicum # 2 81 25 103 108 101 62.0 4e-22 MIILCHLIHDGTLRYHELQKYIPQATAKMLTQQLKELEHDGIIHRKVYPVVPPKTEYSLT ERGKTLTDIIHSMRDWGRKYMAGSFEE >gi|333758476|gb|AFIH01000001.1| GENE 421 381926 - 382036 67 36 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MISQGSIVDEMAEDNHFVFSADLRERCLYRTMKQFF >gi|333758476|gb|AFIH01000001.1| GENE 422 382300 - 382815 581 171 aa, chain + ## HITS:1 COG:FN1254 KEGG:ns NR:ns ## COG: FN1254 COG0778 # Protein_GI_number: 19704589 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Fusobacterium nucleatum # 1 171 1 171 171 139 40.0 4e-33 MDFITLAKSRYSVRNYSERQIEKDKLDKILEAAHIAPSARNKQSARIYVVQSTEGIEKLR SLTRCAYNAPTILMIGYEESEQYRNEMEEGILSGQQDASIVASHMMLEAAELGLGSVWVD GFPNTETAEVFHLPKSVKLVCLMPVGYAADDAKPAPMHEKYRPIEEMVKIL >gi|333758476|gb|AFIH01000001.1| GENE 423 383013 - 384245 965 410 aa, chain + ## HITS:1 COG:MT0627 KEGG:ns NR:ns ## COG: MT0627 COG1373 # Protein_GI_number: 15840000 # Func_class: R General function prediction only # Function: Predicted ATPase (AAA+ superfamily) # Organism: Mycobacterium tuberculosis CDC1551 # 1 408 1 406 411 145 27.0 1e-34 MAYIQRAISDILKSRVKNSKCTLIVGARQVGKSTLVKREFPEFNRSNFDDRLTRVQAKEE PKLFFLNNPCPLFIDEVQKESSILEEIKLKVDDSDERGQFILSGSQKLELMKGVSESLAG RVSVYELSGLSLRELHQIRFNRPFVPKEEYIKEREKELKDYDNIWEIIHRGSYPELYDIE RDWQEFYSSYVATYLERDIHELIAADSITFTKFLTAVAARTGEMLNYKNIAGDVGVSEPT IKNWISILERTGIVFLLQAYSAGALNRAIKTPKLYFRDTGLACYLTRWLTADALKNSAVA GNIFETFVVSEILKSYSNAGKDYRFNIFYYRGKDKNTFGENEIDLIIEEDGILYPVEIKM SGNPKASMGATNQVLDKIPDRKRGMGIILCLIDKKTYLRENLLALPIAYV >gi|333758476|gb|AFIH01000001.1| GENE 424 384358 - 386067 217 569 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 329 552 131 353 398 88 29 1e-15 MRDKDLFHKNPRFYLGLLLTVLEGLLSGSNYIVLYAVLKMLYDGSADIRSITRISCLVGV IFLIRLAIYSTGYTQSQIGGAEVSKNIRLGLGDKLRRVPLSSFTEKQEGQYIHIMTADVN SYEQILTHKLASLVKNGVLSVIVLALICVLYFPAAILLLFSLLLLIPEMGLSFRIVEKYG KEKNSVTAEAVGQIVEYIDGIRTFRSYGMGGVKNRNTTDVLRKFSTVSYQYEAHGIPVNF AFNIVNWLTVPIVMWIGFIPWQSGKIPAITFLFLCMMPMVFARLIAAISVDLFSYRNLLL SKANIQNVLAEKEEAKSQAVFSPKEHDISFHDVSFSYVQGEVVLKEMRFSIPDCKLTAIV GDSGSGKSTILNLIAKYYEPESGEIAIGGQSIRNINAEDVLDSISMVDQDTFLFNDTVRE NIRHAKPSATDEEIETACQKANCDPFIRKMEKDYDTPVGENGNLLSGGERQRLSIARAIL KNSPILLLDEATASLDIENEFAVKQAIVSLLQENKTVVMIAHTLSIIKNADQILVLSGGK VVESGTHEKLLALGGKYTAMWNAEQSITA >gi|333758476|gb|AFIH01000001.1| GENE 425 386064 - 387821 1105 585 aa, chain - ## HITS:1 COG:FN0614 KEGG:ns NR:ns ## COG: FN0614 COG1132 # Protein_GI_number: 19703949 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Fusobacterium nucleatum # 11 568 16 576 578 368 37.0 1e-101 MHKNREKPIKLLLTWAGSDKWYLFASVFCAFLSGLFVIGPYVGIYHLMDAVLLGTLTRNG LTDCIVLVSVTTVFRMVLLGLSGVLSHKGAYNALFRVRCMIIEKLAKVPLGYVSERSTGE IKTVLNENIEKLELCLAHNIPELVSYLTGPVVIFMYLMTVNIPLALISLIPLFLDIPVMM AVFQKMSALLPETNASLADFNSVMVEYVRGMRLIKAYRMGSKSFKKFREAILDENRAWNK IAKKTAPLYAVFILLLESGLLLLVPLGGRLFLHGSIPASVFLLFSYIGSLYLTELLPLQQ LSGNFAQAFSGMSKVKEILALPTFEGGDDFPESHDIRLKNVRFSYDGKINVLENANLSIR DGETIAVVGASGAGKSTVAALIARFHDVDEGEVLIGGKNVKSIRYETLLQHISLVFQKTF LTRDSVFDNIRMGRHASLTEVREAARKAQIDDFIMSLPDGYDTKVGSYGSRFSGGEKQRI AIARAILKNAPILILDEATSAADPENQMEIDKAIKNLCEGKTVIIIAHRLSVVGMCDRVL VVENHTISDIGTHDELLLRNRTYRKSWESYEAARNIRYGKGGDVR >gi|333758476|gb|AFIH01000001.1| GENE 426 387814 - 389337 713 507 aa, chain - ## HITS:1 COG:SPy1787 KEGG:ns NR:ns ## COG: SPy1787 COG1122 # Protein_GI_number: 15675626 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, ATPase component # Organism: Streptococcus pyogenes M1 GAS # 1 460 1 456 464 275 32.0 1e-73 MITFQHVSFSYDSHGEQEAGQRTEDLQDIHLTVHDGECVLLTGKSGCGKTTITRLVNGLV PHFYPGKLRGEVLLDGRNVSEMPLYETASLVGSVFQNPRTQFFNVDTDSEIAFGLENRAF PRERIVEKVETAAKDLKIENLRGRNIFSLSGGEKQQIAFASVYAMNPSVYLLDEPSSNLD MESVASLRSHLKMLKSQGKTILIVEHRLYYLMDIADRIIVLNEGRIKKDCSAKEFLTLSD EERRSMGLRTTDLRKELPLITAEKAQETRLELKKVSLFYKKKNVLENINEKFSQGEVIAL VGKNGAGKTTFSRALCGLHEEIKGEFLRDGRILSKKTRQKISYMVMQDVNYELFAESVKA ECSFGIKNPDADLVAETMAALELTPFSERHPGTLSGGQKQRLAVAVGQICKKELIVFDEP TSGLDYESMERVAKIVRKLSEQGKILFVVTHDYEFFCRTCSRMLVFSDGKIHYDLQCRAK NKEEIRQLFFSALEEKKSGNKGGNCFA >gi|333758476|gb|AFIH01000001.1| GENE 427 389341 - 390069 231 242 aa, chain - ## HITS:1 COG:SP1437 KEGG:ns NR:ns ## COG: SP1437 COG0619 # Protein_GI_number: 15901289 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Streptococcus pneumoniae TIGR4 # 106 235 19 141 147 78 37.0 1e-14 MNRSAYTGNRFGLQFDPRTKIVLLILCVISATIASSLLYESALVFAITVFGCASGKVRRS LFCMAFYGAFYILTLWIRSLEKGVLYTVFTSWLGLFYTVYPCAFLSSIILSTTKVNEFLT AMNKAHIPKKVLIPLAVMLRYIPTVREDWGYIKDAMRLRDVTPSLFGLLKNPAMTVECLY VPLLMTASNTAEELSCAAVTRGIENPKPRTCLLAIQFRGRDLVAIVLAVLILILGFIRER MV >gi|333758476|gb|AFIH01000001.1| GENE 428 390066 - 390677 493 203 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0868_1192 NR:ns ## KEGG: HMPREF0868_1192 # Name: not_defined # Def: hypothetical protein # Organism: Clostridiales_BVAB3 # Pathway: not_defined # 9 203 38 232 232 258 69.0 1e-67 MTSKRKIKKQNLTIKDLITVGIFSAIIFVCISLSGGPFAMFPALTFYFPVGASLLAGPVY LLLIAKVPKTGPIFIAGLLMAIFCYATGMHIGMTIGYLVGSAAADLLAWTARYKSIRINI LSYIVFCLGGTGSYIAYFLNPKVWVSRMLEKGTPKEYLDTMTSAVNHRVFLTMLAGTVFV ALLSGLVGSKLLKKHFAKAGITA >gi|333758476|gb|AFIH01000001.1| GENE 429 390862 - 391824 467 320 aa, chain + ## HITS:1 COG:SP1433 KEGG:ns NR:ns ## COG: SP1433 COG2207 # Protein_GI_number: 15901285 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Streptococcus pneumoniae TIGR4 # 18 317 15 318 330 129 31.0 9e-30 MEVNEFYREWLTRSGFVECESTQNFSPAGKLYLAPKELACGYYWVYGEKDLFDIKIHDFY FFEDHFISLTTPECLSITYYDSVSGEELTPYRRLTAGCVKTFHGGHALYQSIMHKNIPIR SVGIEVFPAYYEKYLRESYPDDYLPPNEAFRRIGQTLDFPEMSRLLRQVWEYNGEGIPAK LFYEAKVAEAVSLVYEHGKHSQNILSAKISKQDRDALCNVTSYIHDHFNSALPLDTLARI ACMGTTKLKTSFKHVYQRTISEYIQERRMSHAEMLLSSTDLTVDQVASAVGYSNAGRFAA NFKNNTGLFPSEYRKMARRK >gi|333758476|gb|AFIH01000001.1| GENE 430 391918 - 392640 517 240 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227873921|ref|ZP_03992141.1| ## NR: gi|227873921|ref|ZP_03992141.1| conserved hypothetical protein [Oribacterium sinus F0268] conserved hypothetical protein [Oribacterium sinus F0268] # 26 227 52 253 254 321 88.0 3e-86 MKKISKSIKICIALGILFGLILLFIKLRFQLSEEETMRIYIYLSIALIIISAIINLSYNL FYGRKMNALMPLLGEAKYDEYLDKITAIRDKVKSKHLRAIAELNRTAALTGKKEYATAVE ILKELEPRVKKMPSVEMVRRLNLCLNYFYLKDYEEAEALYQDSEALFGKYKENVFYKKNF TILDLFMDLCCYGKKEGVAERIQEARRMYPEKQLQEDFEYLEELLEEGKENLQEDTKSDV >gi|333758476|gb|AFIH01000001.1| GENE 431 392704 - 393669 651 321 aa, chain + ## HITS:1 COG:MTH894 KEGG:ns NR:ns ## COG: MTH894 COG0701 # Protein_GI_number: 15678914 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Methanothermobacter thermautotrophicus # 15 315 19 326 327 251 43.0 2e-66 MDWLSRLFRDALEHIGIATESRIGGSLHFFLYDCVKITVYLCVLIFAISYVQSFFPPERT KRIMGRFHGVYANIIAALLGTITPFCSCSSIPIFMGFTAAGIPLGVSFSFLISSPMVDLG SLVLLTGIFGLRIASVYVILGLMLAVLGGLVIEHLSLENEIEPILLQLKPVEQALPTLSR KERLSYAAEQVKTTFRKVFPYILLGVGIGSLIHNWIPENWIISLLGKGNPAGVILATLVG IPMYADIFGTIPIAESLLLKGAELGTVLAFMMGVTTLSLPSMIMLRKVIKPKLLGAFIGI CILGIILIGYIFNALQSVRLP >gi|333758476|gb|AFIH01000001.1| GENE 432 393696 - 394043 250 115 aa, chain + ## HITS:1 COG:no KEGG:FMG_0982 NR:ns ## KEGG: FMG_0982 # Name: not_defined # Def: putative plasmid transfer factor # Organism: F.magna # Pathway: not_defined # 1 113 236 348 350 211 89.0 6e-54 MQTIIANTKGEGEKAGEDFWVKAEKLYYTALIGYIFYEAPREEKNFATLLDMVDASEVRE DDETYMNPIDRLFEALEKKDPTHFAVKQYRKYKLAAGVIELRRTLHHYLSERCFA >gi|333758476|gb|AFIH01000001.1| GENE 433 394355 - 394996 336 213 aa, chain + ## HITS:1 COG:no KEGG:TDE1601 NR:ns ## KEGG: TDE1601 # Name: not_defined # Def: TetR family transcriptional regulator # Organism: T.denticola # Pathway: not_defined # 1 210 1 209 215 268 67.0 1e-70 MSYCSDITKNRILECAKGEFLSKGFENAQVAEIAKLAKVTTGAIYRHFKNKEALFFALIE EEYNYTLDVVSDVEKRSEQKTIRIDSDLVDDEVIIENLFLETMLFVDYMYAHFDNFKLIF ACSKGSQVENFIEDITERYTAKNRKLIHFNAKQEQINTEIKEFEVHVITKGYITSLCECV LHDIPHDNVGEYIRSIVVFQYYGWQGLMKKNNK >gi|333758476|gb|AFIH01000001.1| GENE 434 395055 - 396806 219 583 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 319 558 264 507 563 89 28 8e-16 MKSNNKNVISELLKYADGEKKQLYKSILLATIGELFGMIPFLAIAKLIEKIYQAEVSFRT VLYLTLIALFGQVLKGIFTLYSTITSHKATFHILKNIRSLVAEKMLRVPMGVMIDTPIGK FKNLIVDIVSKLEDSMAHFMPEITSSIVSPVLFLVLIFALDYRMGLASLLTIPLGMLGYI GMMKDYEFRSKTYTTAQNNMNSTLVEYINGIEVIKAFNHSASSYEKFTNAINFFHDSTLA WWKQSWLWSAFVQAVMPSTLLGTLPVGAYLYMNSKISLSSFIVCIILPIGFIAHLMKIGK YSEQFSMVKASLDVIEEFLSKEELKRPKEKVIFDDTLYRFENVSFAYDKELVLKNINFEL KPNTVTALVGSSGSGKSTIAKLMAGFWDPSNGSIYYGGKKIPEIPFEQLTNEISYVAQDN FLFNTSIKENIKMGKPTASDDEVIEAAKAASCHDFIMELENGYNTKVGDAGGSLSGGERQ RITIARAMLKQSKVIILDEATAFADPENEYLIQSAINNLIKGKTLIVVAHRLSTITNADT ILVMKDGKIVENGTHKDLVKKDGVYASMWENYVGGLDNEKEAL >gi|333758476|gb|AFIH01000001.1| GENE 435 396807 - 398531 229 574 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 332 563 2 239 245 92 28 6e-17 MISIVKRILKISGKYQKSVILGLIFSGLKSFFVSLMLLAVLLIMINLEQLNITIIMQATA IVVVSIFGRFIFQYLCDRKLSAAGYEIFKDKRIEIGEKLKKAPMGYFSEKNLGTIQAVLT TTISDLEGMAMLAMNFIVGGFFHAFSMTTMLLIFCFPVGMVSLIAIIFGMGVLKLIAKKT EKYSPIMQDSQEMLVTGAIEYIRGISVLRSFEKGTDGKNKVEKAFMSKCKVDIEVTEGSA YLMKLYEMIFKVASCVLVFVAVILYMKSLIPLSYTLMFIVSAFLIFMELELVDDGAFLSR MLATQLNRLDYVSDIPSLDEGGKEIDLNSYDIELKDVCFGYGEREILKNINLQIKSNSSL AIVGASGSGKTTLCNIIARFWDVNKGEVFIGGHNVKDFTSESLLQNISMVFQKVYLFNDT IENNIKFGKPNATHDEVVEACKKACCHDFITSLSEGYDTVVGEGGSTLSGGEKQRISIAR AILKDAPIIILDEATSSVDPENEHMLISAIKELTKNKTLISIAHRLSTVRGADQIIVIDK GEIVQQGNHKELISQDGVYKHFIEIRKKSIGWQI >gi|333758476|gb|AFIH01000001.1| GENE 436 398519 - 400048 195 509 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 293 473 38 231 329 79 27 5e-13 MANIGDEMGDIVIEFDNVSFSYGTQTERSISNINFKVKEGEFVLLTGQSGSGKTTITRLI NGLIPHFFEGVLTGTVKVLGSDIKTITPGEMGKNIASIFQNPRSQFFTTNSTKEVAFALE NYGIDRDEMIDRVNCAFHDFEAENLMDRDMFSLSSGEKQKIAIIAAKTLNPKIYVFDEPS ANLDIHSIIKLKKIMEWLKKQGHTVIVSEHRLFYLKNLVDKCLIMKDGKIDRELKKNDID NLNDSDIRAYKLRTFKLSNIKYELKDNLIVNKQNADFKVENLSFSYDVNHSVLSNCNLEG NFGETVAIVGHNGNGKTTLGKIMSGLLKARSGQFFIEGKLTKQKNLYKSVYFVMQDADYQ LYSDSVVSELMLSSMNSIKQNDEKIENAITLLNISSFRNRHPQSLSGGQKQRVTIAAAIA SNKKILIFDEPTSGLDYENMKVVSEAMNTLRKKGILIFVISHDLEFLSRVATKAVFIENN TVSKRINLKKSDEFETIKRFLLQSEGYEE >gi|333758476|gb|AFIH01000001.1| GENE 437 400249 - 400746 5 165 aa, chain + ## HITS:1 COG:SP1437 KEGG:ns NR:ns ## COG: SP1437 COG0619 # Protein_GI_number: 15901289 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Streptococcus pneumoniae TIGR4 # 8 148 3 133 147 65 29.0 5e-11 MVAEISPLFISTTIHYFFLCFITLTLATINMIRTSEISEVLASLQNMKIPYYINIPLAVI LRFFPTLKQDITCIKQGIKTRGIDISFLGFLKHPFKVYEMMLIPMLMRMLCTATELSASV ETRGLGVSCKKTSYTEVKFRMLDMLLLVIMMVFYLAIIIMKIKNI >gi|333758476|gb|AFIH01000001.1| GENE 438 400764 - 400982 137 72 aa, chain + ## HITS:1 COG:no KEGG:TDE1596 NR:ns ## KEGG: TDE1596 # Name: not_defined # Def: hypothetical protein # Organism: T.denticola # Pathway: not_defined # 1 69 1 69 193 105 84.0 7e-22 MEEKKKFQIKDLIITALMVLCSQVLYRVLSFLFISPYTMLLAVPIWSIIGAIAYFLVPVK TKNPWMILFNGL >gi|333758476|gb|AFIH01000001.1| GENE 439 401130 - 401585 220 151 aa, chain + ## HITS:1 COG:CAC3531 KEGG:ns NR:ns ## COG: CAC3531 COG1943 # Protein_GI_number: 15896768 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Clostridium acetobutylicum # 7 151 5 149 157 194 64.0 7e-50 MAKKEYALAHTKWMCKYHIVFTPKYRRKIIYYQYKADIRDIIAQLCRYKGVEIIEGHLMP DHIHILVSIPPKISISSFMGYLKGKSALMIFDKHANLKYKFGNRHFWAEGYYVSTVGLNE ATIKKYIQDQEKHDIAMDKLSVKEYEDPFKG >gi|333758476|gb|AFIH01000001.1| GENE 440 401857 - 402156 174 99 aa, chain + ## HITS:1 COG:no KEGG:TDE1596 NR:ns ## KEGG: TDE1596 # Name: not_defined # Def: hypothetical protein # Organism: T.denticola # Pathway: not_defined # 1 99 95 193 193 136 77.0 2e-31 MLIARIKGVGNYKGLTIGYMIFCVLAGFGGMYVPFLFYADQTLKSYEKMFGSKYLGTLTK IVSPMTTVMMLILIAICGLIGAVISKKLLKKHFEKAGMI >gi|333758476|gb|AFIH01000001.1| GENE 441 402195 - 402263 59 22 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MEVIAMYYLGSVIHIEKNNRPF >gi|333758476|gb|AFIH01000001.1| GENE 442 402553 - 403485 764 310 aa, chain - ## HITS:1 COG:TP0166 KEGG:ns NR:ns ## COG: TP0166 COG1108 # Protein_GI_number: 15639159 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Treponema pallidum # 1 310 30 340 367 185 39.0 1e-46 MVSDAISHSVLLGIVIAFFIVKDVGSPFLIVGAAIFGVITVFAVEFLSGTGLVKNDDAVG IVFPMFFALAVVLITKFARNVHLDTDVVLIGEVIVAPLNRIEFMEIDLPKAFVQMGILLV VNLLFVIIFFKELKVTTFDRGFAKLAGFSSGALFYALMTLSSFTAVTAFDAVGAILVVSF LITPGAAAYLVSKDLKVMIAISVGYAVINSSIGYVLSLIMNVSMSGMTAAAAGVTFLLTF LFNGEGLITAIFIRLKRKSELKPELFLTHIGNHSGKREEREELGLGSIRDHLKWKQAEVD KIAERLIKKG >gi|333758476|gb|AFIH01000001.1| GENE 443 403445 - 403558 107 37 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPSKTECEMASETIESFLKTKNGLNTAQAAAVVRSTK >gi|333758476|gb|AFIH01000001.1| GENE 444 403595 - 404482 384 295 aa, chain - ## HITS:1 COG:BS_ytgC KEGG:ns NR:ns ## COG: BS_ytgC COG1108 # Protein_GI_number: 16080127 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Bacillus subtilis # 15 290 17 294 435 182 39.0 5e-46 MLNLDILTSYSFIIVGSGTFLLAAIAGAVGCITVLKGQSLIGDAIGHAAFPGIILSFMLF MQREPVLLTMGAVASGATAFMLIQVIKENSKLKLDAILAVVLSSFFGVGMVLKSYIQGNS NYKDAAQSGLSSYIFGQAAYIMKDDVKLIVYIGVPTLVLLVLFYKEIKLFLFDEIYAKTI GIRTVLLYGIILVMTMGIIAAGLKLVGAILISSLLIIPAITALQWSNKFSRVLIIAGVVG GVSALIGTYISTAFNGMSTGATIILIMGSFAIISLVIGPHGMIKNLRMRRHGGND >gi|333758476|gb|AFIH01000001.1| GENE 445 404475 - 405191 243 238 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 8 235 7 233 311 98 27 1e-18 MEKVIVKVEDLTIAYHDKPVLKDCDIDIMAGSVTAVIGPNGAGKSTLIKGILGLQNKLAG EILIMGEPIKKVQKKIAYIPQTSEVNWDFPTTVMDVVLMGRYVHLGWFRHPGLEDRKKAE AALKRIGMYEFKNRQISKLSGGQRQRVFIARLIAQEAEIYFMDEPLAGIDKVTEKVIIDF IKEERKKGKTAVIVHHDLATIREYFDHVVIINKKVVAAGRVSEAFTNENLEKAMMKNA >gi|333758476|gb|AFIH01000001.1| GENE 446 405206 - 406144 537 312 aa, chain - ## HITS:1 COG:FN0668 KEGG:ns NR:ns ## COG: FN0668 COG0803 # Protein_GI_number: 19704003 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Fusobacterium nucleatum # 5 312 11 312 312 205 39.0 1e-52 MRKTILFLLLGVLLLTGCGNMGSTKEAVSNANPQPKKKVTVTTSFLYDMVNQLAGDMVDK ELIIPAGEDPHLYVAKPEDLKKIAEADLLLFHGLHFEGKMQEVLEKKGYAVASTFPEDKI GKMEEDGAVIVDPHFWFDIDLYKEATENAGAKLSELLPEKKDEIDKNTKAYLEKLSALDE ENKKSLAEIPEGGRYLITPHDAFNYFSRRYSIEVVAPQGVSTDSEVANKDIDKTVDFIVE HKVKAIFAESTTDPARMEKLKEACRAKGFDVKVVSGEGNELFSDSLAPKGQSGDTYIDMY KHNVKLITKNLK >gi|333758476|gb|AFIH01000001.1| GENE 447 406405 - 406659 86 84 aa, chain + ## HITS:1 COG:no KEGG:TDE1596 NR:ns ## KEGG: TDE1596 # Name: not_defined # Def: hypothetical protein # Organism: T.denticola # Pathway: not_defined # 1 71 1 71 193 94 73.0 2e-18 MEEKKKFQIKDLIITALMVLCSQVLYRVLSFLFISPYTMLLVVPIWSIIGAIAYFLVPVK QKSMDDFIILCTYKHYRFLSTIYH >gi|333758476|gb|AFIH01000001.1| GENE 448 406685 - 406984 161 99 aa, chain + ## HITS:1 COG:no KEGG:TDE1596 NR:ns ## KEGG: TDE1596 # Name: not_defined # Def: hypothetical protein # Organism: T.denticola # Pathway: not_defined # 1 99 95 193 193 137 76.0 1e-31 MLIARTKGVGNYKGLTIGYMIFCVLAGFGGMYVPFLFYADQTLKSYEKMFGSEYLGTLTK IVSPMTTAIMLIVIAICGLIGAVISKKLLKKHFEKAGII >gi|333758476|gb|AFIH01000001.1| GENE 449 407186 - 407380 216 64 aa, chain - ## HITS:1 COG:no KEGG:Elen_0480 NR:ns ## KEGG: Elen_0480 # Name: not_defined # Def: transposase IS116/IS110/IS902 family protein # Organism: E.lenta # Pathway: not_defined # 1 64 1 64 406 62 40.0 4e-09 MIYVGVDIAKLNHFASAISSDGEVLIELFKFTNDAGGFQILVSKLISLNTEPDSIIIGLE STAK >gi|333758476|gb|AFIH01000001.1| GENE 450 407654 - 408583 885 309 aa, chain + ## HITS:1 COG:BMEII0308 KEGG:ns NR:ns ## COG: BMEII0308 COG0523 # Protein_GI_number: 17988653 # Func_class: R General function prediction only # Function: Putative GTPases (G3E family) # Organism: Brucella melitensis # 8 194 19 203 372 114 36.0 3e-25 MEKKKLYVLTGFLGAGKTSLLLHILEEFSDKKLAVIQNEFGKTGIDGSILEKKELTIKEI NRGSIFCSCLQLSFVEALAEMSKGDMEYLFVESSGLADPSNIRDILKSVEVLAGDVYDFQ GVICLIDGVHFPKQVKDTETVDRQLKHCDVAIVNKMDLISEEQYKKVLSLIREVNPHCLI LHCENGRADLSFIREGFEKGSWVDSEESLNTVDNKPKTISLVCTENVSKERFHQFLQEVL PDCYRIKGFFLLDNCWMQVDVVEELIDYKPCPEKEISELVFLSKVGPKVIRSIDEAWKKT MNSPMKLKN >gi|333758476|gb|AFIH01000001.1| GENE 451 408616 - 408846 302 76 aa, chain + ## HITS:1 COG:MTH895 KEGG:ns NR:ns ## COG: MTH895 COG0526 # Protein_GI_number: 15678915 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Methanothermobacter thermautotrophicus # 1 76 2 77 77 65 47.0 2e-11 MEIKVIGAGCKECDTLYQNVAEAVKELGKDAKIEKVEELIEIVKLGVLSVPSLMIDGKLV VSGRVPGVEELKKLLS >gi|333758476|gb|AFIH01000001.1| GENE 452 408863 - 409900 1030 345 aa, chain + ## HITS:1 COG:SP0182 KEGG:ns NR:ns ## COG: SP0182 COG1619 # Protein_GI_number: 15900119 # Func_class: V Defense mechanisms # Function: Uncharacterized proteins, homologs of microcin C7 resistance protein MccF # Organism: Streptococcus pneumoniae TIGR4 # 4 342 2 339 343 477 65.0 1e-134 MQKVKTVAIVSLSSGVLGEDFVQHEVKIGLERLRRFGLEVKFMENALKGLDYLKEHPEKR AEDFLQAFSDDSIDMILCAIGGVDTYRLLPYLFEEGQLEKVVKQKIFLGFSDTTMNHLML HKLGIKSFYGQAFIPDICELEEEMLPYSEKYFLELIQSGSIRSIEPSPIWYEERTDFGPK AIGAKRVSHENEGFLLLQGSPVFQGEILGGCIDTLYDVFDTTRHEDSVSLCKKYALFPDL EDWKGKILLLESSENQPNPEKYRKMLKALKKSGIFEVLSGVLVGKPMDERYAKEYQEILP EVIGNPTLPIVFNLNVGHATPRAIIPFGIMAKVDILAQRISFSRE >gi|333758476|gb|AFIH01000001.1| GENE 453 409962 - 410168 204 68 aa, chain - ## HITS:1 COG:no KEGG:CD1100 NR:ns ## KEGG: CD1100 # Name: not_defined # Def: putative conjugative transposon protein # Organism: C.difficile # Pathway: not_defined # 1 68 1 68 117 98 77.0 9e-20 MAKRPVPLYDFAAFEQAIKAARTARKESHKDVSDAMNISPRYLTNIENKGQQPSLQIFYE LVPRYNIS >gi|333758476|gb|AFIH01000001.1| GENE 454 410331 - 410675 183 114 aa, chain - ## HITS:1 COG:BH0737 KEGG:ns NR:ns ## COG: BH0737 COG1733 # Protein_GI_number: 15613300 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Bacillus halodurans # 9 106 12 109 118 115 54.0 2e-26 MAKSQAVDEQCPVEVGLNILSGKWKLKILWHLSKGTIRFNELQRVLGNITTKTLTQQLRE LEEQGIITRKVFPEVPPKVEYSLSELGATLKPILAQLCDWGKAYHSYNSHTEIV >gi|333758476|gb|AFIH01000001.1| GENE 455 410795 - 411019 132 74 aa, chain + ## HITS:1 COG:CAC3337 KEGG:ns NR:ns ## COG: CAC3337 COG2159 # Protein_GI_number: 15896580 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase of the TIM-barrel fold # Organism: Clostridium acetobutylicum # 1 69 1 69 262 60 39.0 7e-10 MIIDSHEHIMFPAKMQLDKMDAAGVDRAILFCSAPHPEKANNLNELETEMNTLYKILAGA NSKEDNIKRLKKIL >gi|333758476|gb|AFIH01000001.1| GENE 456 411079 - 411603 322 174 aa, chain + ## HITS:1 COG:CAC3337 KEGG:ns NR:ns ## COG: CAC3337 COG2159 # Protein_GI_number: 15896580 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase of the TIM-barrel fold # Organism: Clostridium acetobutylicum # 1 168 94 260 262 150 41.0 2e-36 MALSLEETQNWIDTQITANSLCGIGEFTPGNEQQIIQLETVFQAIMNTRLYPVWVHTFNP VTLSGIKQLMSLCEKYPEVPVIFGHLGGSNWIEVIKFAKEHKNVYLDLSAAFASIATKMA LVELPERCLYSSDAPYGEPYLYKQLIEFVSPSQSVAKKALGENILELLERINLI >gi|333758476|gb|AFIH01000001.1| GENE 457 412157 - 412606 635 149 aa, chain + ## HITS:1 COG:RSc0200 KEGG:ns NR:ns ## COG: RSc0200 COG0071 # Protein_GI_number: 17544919 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone (small heat shock protein) # Organism: Ralstonia solanacearum # 41 147 37 139 140 71 40.0 5e-13 MLAPSIFGENLFDDWFDFPSFGGLGRVENKLYGDRAGRLMKTDVHEKDGQYDMDIDLPGF KKEDIKVELHDGYLQVSAVKGLNEEEKDEKGKLIRQERYSGSMQRSFYVGDSIKQEDIKA KFEQGVLKLSFPKEGEKKLPEKQPIMIEG >gi|333758476|gb|AFIH01000001.1| GENE 458 412771 - 413652 729 293 aa, chain - ## HITS:1 COG:no KEGG:CPR_0879 NR:ns ## KEGG: CPR_0879 # Name: not_defined # Def: CAAX amino terminal protease family protein # Organism: C.perfringens_SM101 # Pathway: not_defined # 4 271 6 273 273 124 31.0 6e-27 METKIFDKKKLLFLFLPFAVIIIYDIIGNFITGALFWVLDLFRISFDWVNNTPAFLDAFL ATCLSIILYIFYRKVFPRKKAEIQIAPWQGILFSVVIGFGAGGLSTIWLNLVDLVASHFS ALGEQAEAFSSMYDDLEKGSYIWTFLAIVAIGPLVEEILFRGVIFRSFEEATDLPWFPLL LSGVMFGIWHGSFIQAVYTAMMGIILGYYIKKTRTLFYVVLAHAVNNLSGTLPPALDTDF NNSLITVLSYVCIIPMFCILYYLHRQGKMKAEEISESEQSQEEEAVQFASSTC >gi|333758476|gb|AFIH01000001.1| GENE 459 413886 - 414437 469 183 aa, chain + ## HITS:1 COG:AGl2275 KEGG:ns NR:ns ## COG: AGl2275 COG3760 # Protein_GI_number: 15891247 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 12 172 1 160 169 83 29.0 2e-16 MKLTVEKGRPEIDEGRSRKEIAVYDYLDKLGISYERADHAEAHTMEDCEEVSNALGAKVC KNLFLTNSKHSFYYLLMMPGNKPFKTAELSREIGCGHLSFAEAEEMERVLGCTPGSASVF GLMHDKEGLVELLVDRDLLKDEYLGAHPCHNIATLKVKTKDIFTKFIKATKHYKTEVTLR GQS >gi|333758476|gb|AFIH01000001.1| GENE 460 414667 - 414816 263 49 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227873029|ref|ZP_03991324.1| ribosomal protein L33 [Oribacterium sinus F0268] # 1 49 1 49 49 105 95 7e-21 MRTKIILACTECKQRNYFITKEKKLHPERMEVTKYCKFCKKHTLHKETK >gi|333758476|gb|AFIH01000001.1| GENE 461 414816 - 415016 274 66 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227873028|ref|ZP_03991323.1| ## NR: gi|227873028|ref|ZP_03991323.1| hypothetical protein HMPREF6123_1262 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_1262 [Oribacterium sinus F0268] # 1 66 1 66 66 84 72.0 2e-15 MQGENKSGLGSFVSGLEAEFKKIVFPTRPTVIKQSIATIAISVLIGMLITGLDIAMKWGL GLVLVK >gi|333758476|gb|AFIH01000001.1| GENE 462 415027 - 415557 688 176 aa, chain + ## HITS:1 COG:CAC3149 KEGG:ns NR:ns ## COG: CAC3149 COG0250 # Protein_GI_number: 15896397 # Func_class: K Transcription # Function: Transcription antiterminator # Organism: Clostridium acetobutylicum # 1 175 1 172 173 190 55.0 9e-49 MAEKNTEARWYVAHTYSGYENKVKMDLEKTIDNRGLQDVILEVSVPMQPVIEVKNGVEKK TDKKMFPGYVLVNMVMNDETWYVVRNTRGVTGFVGPGSKPVPLSEEEILTLGYRKSEVLV DFAVGDTVTVISGTWRDTIGVITQINDQKKTVTINVEMFGRDTPVELSYGEVQKLR >gi|333758476|gb|AFIH01000001.1| GENE 463 415666 - 416091 682 141 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227873026|ref|ZP_03991321.1| ribosomal protein L11 [Oribacterium sinus F0268] # 1 141 1 141 141 267 95 2e-69 MAKKVEGYIKLQIPAGKATPAPPVGPALGQHGVNIVAFTKEFNARTANEGDMIIPVVITV YADRSFSFITKTPPAAVLIKKACKLQKASGEPNKNKVATISKADLQKIAETKMKDLNAAS IEAAMSMIAGTCRSMGVNVEQ >gi|333758476|gb|AFIH01000001.1| GENE 464 416112 - 416804 1117 230 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227873025|ref|ZP_03991320.1| ribosomal protein L1 [Oribacterium sinus F0268] # 1 230 1 230 230 434 95 1e-120 MKQGKRYAEVAKAVDRQVKYSEADAISMVKKNATAKFDETVELHIRTGCDGRHADQQVRG SVVLPAGTGKNVRILVFAKDAKADEALAAGADFVGADDLVPRIQGGWFDYDVVIATPDMM GVVGRIGRLLGPKGLMPNPKLGTVTMDVAKAIADTKAGKVEYRLDKANIIHVPVGKASFT EEQLKSNLDALMAAIVKARPSSLKGAYMKSITLTSTMGPGVKLDAVQFGA >gi|333758476|gb|AFIH01000001.1| GENE 465 417100 - 419196 1869 698 aa, chain + ## HITS:1 COG:no KEGG:GYMC10_2394 NR:ns ## KEGG: GYMC10_2394 # Name: not_defined # Def: APHP domain protein # Organism: Geobacillus_Y412MC10 # Pathway: not_defined # 41 552 550 1047 1115 338 38.0 8e-91 MKFRKQLTLLLTMTGLGLLSHGTAFAETRTELWAKESQGYGAKLPYIRYEAEEGVGRDAV LKHSTAYDEVEMEASNQSYVQLTKEDSSVRFTVKKTANAMTLRFTMPEDASGELEISVER NGELLGKKTLELDNSSAWQYVKENDVFDENIADSHSRFRFDERHFLLENDSKELMELETG DVLTIRRTDKKADELGIDFIELEQAPEAKEAPESSISITDAPYSAVPNDGQDDSKAFLDA LKDADAENKTLYIPEGTFDFDQKLVLSATDMRITGAGIWYTRLHFTSEEQAGGGIEFLDS SSNVEMDNLYMDSELKSRFHQEANYKGIAGVLGENSKLHDLWIEHFECGIWVGDYVEADK MKNTDKLTVSNSRIRNNFADGVNFAQGTKNSKVQNSNIRGNGDDGLATFASKAIVKIKEN VNGEEQVRYIHTESKPAKNNAFLNNTVELTWRASGIALHGGENHRIEGNLVKDITSGPGL RVSTVFPGYNFDDNQNISIQRNLLIQTGTDNDFYGNALASIHFEKLYGDMKKITVADNRL INSPHGKYSGNFYIPEEGTTEITLRNNEEKSIDLEPMLAEEEKHDGALNIELHDQEEIPE NANFRLYWFSGETEENGKTVRYWVKKLEGIHLDESMEYSLEDGTKVFNFTPDDIPEYIPI SGTAFVEDYYYEGEDWIRWESPEGVQYVKIRYWSPKEA >gi|333758476|gb|AFIH01000001.1| GENE 466 419410 - 419670 375 86 aa, chain + ## HITS:1 COG:no KEGG:SSA_0394 NR:ns ## KEGG: SSA_0394 # Name: not_defined # Def: hypothetical protein # Organism: S.sanguinis # Pathway: not_defined # 1 86 7 92 92 111 65.0 1e-23 MSEKSLAVFGWVGTTISVLMYVSYIPQIMNNLHGVKGSPVQPFVAAINGVIWVSYALLKE KKDFPLAAANAPGIIFGLITGITAIL >gi|333758476|gb|AFIH01000001.1| GENE 467 420039 - 420536 602 165 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|239623242|ref|ZP_04666273.1| ribosomal protein L10 [Clostridiales bacterium 1_7_47_FAA] # 1 164 1 164 166 236 71 3e-60 MAKVELKQPIIDEIKGFLDGAVAATVVDYRGLTVAEDTALRKALREAGVQYKVFKNTLIK RAAEGTDFAQLDPVLDGPTALAVSKDDATAAARIFAKFAKTSPKLEFKGAVVEGKFYDAK AVQALAEIPSREELLGRLLGSIKSPVTNFARVLNQIAQKGDGEAA >gi|333758476|gb|AFIH01000001.1| GENE 468 420586 - 420984 623 132 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227873018|ref|ZP_03991313.1| ribosomal protein L7/L12 [Oribacterium sinus F0268] # 1 132 1 132 132 244 98 1e-62 MEEKTMAKLTVEEFIAAIKELSVMELNDLVKACEEEFGVSAAAGVVVAAAGAGAGAGAAE EEKTEFDVELTDVGPNKIKVIKVVREATGLGLKEAKDLVEAAPKVLKEGASKAEADDIKA KLEAEGAKITLK >gi|333758476|gb|AFIH01000001.1| GENE 469 421612 - 421749 73 45 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQYRHEIEHALASLAPVEGGTALVIRKRSEAVWVYKWGTLSLASP >gi|333758476|gb|AFIH01000001.1| GENE 470 422021 - 422314 377 97 aa, chain + ## HITS:1 COG:no KEGG:EUBELI_00577 NR:ns ## KEGG: EUBELI_00577 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 9 84 30 105 114 96 65.0 3e-19 MFLANIAWKKLGIFAGGVLFGTAGMKILGSQDAKKVYTEAAAAVLRGQDCVMKVSTTIKE NCEDIYADAKRINEKRAEAEEKALICDCAEECDGKEV >gi|333758476|gb|AFIH01000001.1| GENE 471 422349 - 424505 1816 718 aa, chain + ## HITS:1 COG:SP2101 KEGG:ns NR:ns ## COG: SP2101 COG2217 # Protein_GI_number: 15901916 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Streptococcus pneumoniae TIGR4 # 1 685 1 683 687 374 32.0 1e-103 MKCKILHESQGRMRIHTVQPRMTVEQADILEYYLKARAGVLDVKVNDRTGDAIITYEGTR EGIVEALSRFSYQENAGLVPEHTGRALNREYEDKLVLTVVNRVVNVLFFPQPLKRVLTGI KAIPYLLKGIGTLLRGKIEVALLDAVAISASILTGDYDTASSVMFLLGIGEILEEWTHKK SVDDLARTMSLDVDKVWTVVQGEEVLLPINEVQIGAEIIIRTGNMIPLDGKLCSGEAMVN QASMTGEAVPVRKVAGSYAYAGTVVEEGECHIIVEKAAGSGRYDRIVKMIEESEKLKSST EDRASHLADKLVPYSLGGSVLAYLLTRNVTKALAFLMVDFSCALKLSMPVAVLSAMREAG KYHISVKGGKFMEAISEANTIVFDKTGTLTYAKPKVEQIITFMGEDENEMLRMAACLEEH YPHSMANAVVTEAELRDLHHAERHSKVEYVVAHGISSIYEGKRVLIGSYHFVFEDEHCEI PKGEEEKFNSIPEEYSSLYLAVNGKLAAAILISDPLRAEAKDVIGRLKSLGIDKVVMMTG DNKHTAKAVAKKVGVDEFYAEVLPEDKATFIQEEHKKGRKVIMVGDGINDSPALSEADTG IAISAGAAIAREVADVTVSEGNLYELVILKEISNRLMRRINDNYRFIIGFNSALIAMGFF GVITPSGSALFHNLSTIATGLKSMTALLPEEKKEEVEALGQNAVAINEGYALQNAKSA >gi|333758476|gb|AFIH01000001.1| GENE 472 424549 - 424947 476 132 aa, chain + ## HITS:1 COG:CAC1469 KEGG:ns NR:ns ## COG: CAC1469 COG1321 # Protein_GI_number: 15894748 # Func_class: K Transcription # Function: Mn-dependent transcriptional regulator # Organism: Clostridium acetobutylicum # 7 126 2 122 122 91 47.0 3e-19 MKPYESHESEENYLEAILMLSLDHRKVRAIDIANMLGFSKPSVSIALKRLKEEGKVESDE KGSLSLTEQGLVIAQSTYEKHTVLTDVLVALGVNAYTASQDACRMEHVLSPESFGKIKDF YAKFKKGEYDEK >gi|333758476|gb|AFIH01000001.1| GENE 473 425164 - 425373 295 69 aa, chain + ## HITS:1 COG:no KEGG:Rumal_1322 NR:ns ## KEGG: Rumal_1322 # Name: not_defined # Def: FeoA family protein # Organism: R.albus # Pathway: not_defined # 1 69 2 70 70 69 59.0 5e-11 MPLTLAGTGVALEIKKIGGSAEMRQHLSDLGFVVGGEVTVISTSLGNVIVKIKDARVAIS KEMANKIMV >gi|333758476|gb|AFIH01000001.1| GENE 474 425412 - 425639 352 75 aa, chain + ## HITS:1 COG:L192240 KEGG:ns NR:ns ## COG: L192240 COG1918 # Protein_GI_number: 15672170 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+ transport system protein A # Organism: Lactococcus lactis # 3 71 80 148 152 75 53.0 2e-14 MTLKDLKPGQSAVVKKLTGEGAVKRRIMDMGLTKGTEIFVRKVAPLGDPLELTVRGYELS VRKADAEMIEVEEKV >gi|333758476|gb|AFIH01000001.1| GENE 475 425650 - 427863 2427 737 aa, chain + ## HITS:1 COG:L190009 KEGG:ns NR:ns ## COG: L190009 COG0370 # Protein_GI_number: 15672169 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+ transport system protein B # Organism: Lactococcus lactis # 5 719 4 702 709 678 46.0 0 MAVTIALAGNPNAGKTTLFNQLTGSNQYVGNWPGVTVEKKEGKLKGHKDVIIADLPGIYS LSPYTLEEVVARNYLINNRPNAILNIVDGTNLERNLYLSTQLKELGVPVIMAINMMDVVK KNGDVLNLEALGKAMGCKVISISALRNQGIDELIQIAVAEANSGVEPAIEHRFSENVEKA LSEIQSKITGEVPEALTRFFSIKLFERDDKIRNELPEKAKNVDVESIISEIEKEEDDDAE SIITNERYKYIQSIISSAYEKRGQTGLTVSDKIDAIVTNRFLALPLFALIMFGVYYISIS TVGTKMTDWVNDVLFGNDPWSFFGLFDVPSIPGAVTSLLESMNVNEALQGLVIDGIVAGV GAVIGFLPQMLTFFLFLAFLEGCGYMARVAFIMDRVFRKFGLSGKSFIPMLIGTGCGVPG VMGSRTVENERDRRMTIMTTTFIPCSAKLPVIALLAGALFNNSAWVGWSAYFLGVCAIVF SGIVLKKTKMFAGQPAPFVMELPAYHMPRPIDILKSMGERGMSFVKKAGTVILLAAILVW FLSRFNFRMQYLPEEEMDSSILAGFGNSLVWLFAPLGWGQWKAVVAAVTGLIAKENVVGT FGTLFNYAGDASELADDSSAIWEKVREYFGSGLAGYSFLAFNLLCAPCFAAIGAIKREMN NGRWTMFAIGWECFLAYCVSLVIYQIGGLVTGAVKFNIFTIVAFLLVAAGIWGLLRPYKE ADTLSEKEERAVERAMA >gi|333758476|gb|AFIH01000001.1| GENE 476 428071 - 428298 223 75 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227873007|ref|ZP_03991303.1| ## NR: gi|227873007|ref|ZP_03991303.1| hypothetical protein HMPREF6123_1242 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_1242 [Oribacterium sinus F0268] # 1 75 1 77 77 110 72.0 5e-23 MGNIIVIVFVAGLILLVLRALRKEHKESGSCAFCSYAKSGKCNHVGHEELDHQNFHLTKE EQAILDRHSRNRKKA >gi|333758476|gb|AFIH01000001.1| GENE 477 428363 - 429238 729 291 aa, chain + ## HITS:1 COG:lin1322 KEGG:ns NR:ns ## COG: lin1322 COG2017 # Protein_GI_number: 16800390 # Func_class: G Carbohydrate transport and metabolism # Function: Galactose mutarotase and related enzymes # Organism: Listeria innocua # 1 290 1 289 290 153 31.0 3e-37 MLCIESPNLSVKIKEKGAELCSIYDKEKERELLWQGDRRLWAEQAPILFPFIGRLKGKAY SYNGQKYPMDLHGFARENVFRVVEHNEDSCLLELRDTAVTRQAYPFAFRLRQYYKVKGTS LLIETKIENLGMETMYFALGLHPGFQLYSENDKISDFELDFPDCPGEKLEQILFSEESLT KKERGEAFLKEKSLSLSYDLFRNDAPVFPKTGGKAFLHKRGEKEGLWMEYPDYSYIAIWQ PYGKEAPFLCIEPWTSLPGRDGVEEDICAKEDFQSLLPDEERSYHCKISLD >gi|333758476|gb|AFIH01000001.1| GENE 478 429235 - 430530 1095 431 aa, chain - ## HITS:1 COG:lin2192 KEGG:ns NR:ns ## COG: lin2192 COG0534 # Protein_GI_number: 16801257 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Listeria innocua # 2 425 15 439 443 171 27.0 3e-42 MKNFIHYVSHSIAGMIGISVYILADTYFIASYSGSDGLAVLNLVLPLYGMMNALGSMLGI GSATRYSIRKARGKDVSSFFLQAVFWNAVFSIPFLLAGLFFSREILALLGADRELQELGI PYLRTILPFAFFYMVNYTTSAYVRNDNNPSIAMMGSVFSSLFNIVFDYIFMFPMGMGLAG AALATGISPIVGSAFCLIHYCGKKNTVPFGWQTPRFKHLCACCQLGLSNFVGEIASAVTI ATFNMLILNLSGNTGIAAYGVISNVSSVCNAIYNGLAQGVQPLMSHSYGKKDKHLLQKYL QYGIVTALLISVIILFFVNYKSDFFIALFNSENNPDLYVYAKEGIRLYFWAFLFVGINTL LVSYFSATNNPKPAFLSSLIRGTFAIVFFALLLSYFWKMVGVWLAFPCSEAFSLLLILYY YKKEQKENQLA >gi|333758476|gb|AFIH01000001.1| GENE 479 430685 - 432064 1071 459 aa, chain + ## HITS:1 COG:MA2050 KEGG:ns NR:ns ## COG: MA2050 COG0534 # Protein_GI_number: 20090897 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Methanosarcina acetivorans str.C2A # 8 437 2 435 468 214 33.0 2e-55 MRKALTEEEKYRQMMEEPVNTLIPRLALPSMVSMVVVAVYNMADTFFVSRLGTSASGAVG IVFSMAAIIQAVAFMIGMGCGNEISRLLGAKKQEEAARFVAIGFFTEIILGTIIALFGIV YCTPLVYALGSTETIAPYAIRYARYILLGTPFIMASLGMNNMLRFQGNSFYSMLGISTGG ILNMFLDPLFIYGFHMGIMGAAVATTISQIVSFSILLYQCNKMPACISVSLKNFKPSLKR YILILKFGLPSLARQGIAGVSTIILNFSAHPYGDAAIAAMAIVMRITMFINSLVIGFGQG FQPVCGYCYGAKNYKRVEKAYYFSLKVCFSILIVMGVVVFIFAKPLITAFRKEDAEVIRI GFLALRLQCLTIPLAAQLTMANMFSQTTGYPLRASIVALLRQGICLIPILLVLPPLFGLL GVQSSQPVSDVFAAVIAFLITDGILKELRLKTDAKPNPQ >gi|333758476|gb|AFIH01000001.1| GENE 480 432075 - 433292 758 405 aa, chain + ## HITS:1 COG:no KEGG:BP951000_0356 NR:ns ## KEGG: BP951000_0356 # Name: not_defined # Def: major facilitator superfamily protein # Organism: B.pilosicoli # Pathway: not_defined # 1 396 5 386 390 357 49.0 8e-97 MFSLLLFIIYLSFISLGLPDAVLGAAWPIIHEEFGVPISFSGSIYMLISCCTILSSLKSE SLRLRFGTGKITAFSVLLTAVAIFGFSISPSLSVMLFFAIPYGLGAGSVDAALNHYVAVH YSGRSMNWLHCMWGIGAALGPYILGFVLQRGESWRSGYLVLSMIQATLTIVLFLSLGLWG KEEKKEKTEEKKTPMSFRQILSITGAKECLVSFFLYCAIEQTLGLWSGSFMVYSLKIEAK LAASFVALFYFGITFGRFLAGILAAQWQDEALILGGCGILFLGLVLLFCSMVPSQEVKLF GMELRQILVICALLLSGLGCAPIYPAIIHSTPRNFGAENTSALIGKQMAAAYIGSMSFPP FFGVLAKIFGTGLFPFFSTVLFFGMLFMYRNLLYKTRGKRGKIER >gi|333758476|gb|AFIH01000001.1| GENE 481 433320 - 434171 759 283 aa, chain + ## HITS:1 COG:TM0177 KEGG:ns NR:ns ## COG: TM0177 COG1284 # Protein_GI_number: 15642951 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Thermotoga maritima # 5 275 1 271 283 159 32.0 7e-39 MNKDLLAKIKDSFMVNLGIVIVAAAIFFFQVPSHVAVSSISGLAIILNHFLPLSVATLTM IMNVILLIIAYFFLSHSFAYKTAYATIVLPAIMLLFEKIFPNNQSLTGDVLLDVIAYIFF VSIGLAILFNRNTCSGGLDIVAKLMQKYLHMDLGKALGFSGLFIASLSIFAFDKKSVILS VLGTYFNGIILDHFIFGQSIKKRVCVITDKSEEVTDFILNRLHSGMSIYDIVGAYSHERK KEIVAVVDRQEYQKLMRFLEAEDPKAFITVYNVAEIHYTPKKW >gi|333758476|gb|AFIH01000001.1| GENE 482 434394 - 435455 1345 353 aa, chain + ## HITS:1 COG:MPN564 KEGG:ns NR:ns ## COG: MPN564 COG1063 # Protein_GI_number: 13508303 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Mycoplasma pneumoniae # 1 349 1 349 351 471 64.0 1e-132 MKAYAMLKIGESGWIEKDRPACGPMDAICTPLAVAICTSDVHTLWEGAIGERHNMILGHE CCAEIVEVGDMVKDFKVGDRVLVPAITPDWNSLEAQAGFSMHSGGMLAGWKFSNFKDGVF GEYFHVNDADGNLALLPKGIDPVDACMLSDMVPTGFHGVELADIQFGDTVLVIGIGPVGL MSVAGASLRGASRIICVGTRPACIEVAKKYGATDFVSYKNGTIEDQVLALTDGKGVDRVV IAGGEVDTFASAVKCMKPGAKIGNVNYLGKGESIGIPRIQWGVGMGHKAINGGLMPGGRL RMEKLGALVASGKLDVHPLVSHVFDGWENLEKALFMMRDKPADLIKPVVSIKK >gi|333758476|gb|AFIH01000001.1| GENE 483 435835 - 437049 1329 404 aa, chain + ## HITS:1 COG:VC2033_2 KEGG:ns NR:ns ## COG: VC2033_2 COG1454 # Protein_GI_number: 15642035 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Vibrio cholerae # 5 398 6 411 443 315 41.0 1e-85 MRFTLPRDIYHGENALEALKTFKGKKAFVCVGGGSMKRFGFLDRVVQYLQEAGMEVKLFE GIESDPSVDTVMKGAKEMQDFGPDWIVAIGGGSPIDAAKAMWIKYEYPDCTFEDMCKVFG IPTLRNKAKFCAISSTSGTATEVTAFSIITDYEKGIKYPIADFEITPDVAIVDPALAQTM PKKLVAHTGMDALTHAVEAYVSTANCDYTDPLALHAIEMIRDDLVDSYNEDKNARNEMHN AQCLAGMAFSNALLGIVHSMAHKTGAVFGDFGAHIIHGAANAMYLPKVIAFNAKDETAKK RYAKIADVIGLSGNSDDEKVKALITYVRGLNDKLNIPHCIKNYGADSYPTEQGFVPEKVF LERLHDIAVNAIADACTGSNPRQPSVEEMEKLLKCCYYDTEVDF >gi|333758476|gb|AFIH01000001.1| GENE 484 437301 - 438710 1693 469 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0868_0284 NR:ns ## KEGG: HMPREF0868_0284 # Name: not_defined # Def: putative lipoprotein # Organism: Clostridiales_BVAB3 # Pathway: not_defined # 1 468 1 453 456 608 67.0 1e-172 MKKTLSVLLAMAMTIGLVACGGASANKTTTAVDQTTAAGSEKEAAEDSKKAENLTETQKI IQEAQGMTMEELAKKAIEESNGKMFYGVGNSSRGKTALPLFIDYLKTIDPSYNMEFEWQQ PKNNKIFDQLNADNKKDVGTFAMTLIQDGNQIKTKMTDTGILDTFIPKEWAEANGTTPDQ YKGFLPLQTLNKVFMYNSTGNKTYNNVWDFVAEGEHGLFMGVDSEIVGKNFLYMLTEDKY AAWMKEAFDALPEDKKAYFEPTVKECKATAEEFGLGEDAQYSLAWIKLWMASYNEQTDDG PICTTLTDASAKDQFGLLVYSKLRSIEESPTVSVNNIKVAAYQDGYKGVGGFGYCHYLFV TDNSPLPWTACAFIAYLTTTEDGFSAWGKDMGGYSSNPVVAKENEEKFHHEKGGMAADGT TVEFDAKNDRGYEWWITDGKLVLEDPDYCADAAFGIGSWIEVLDKNSAQ >gi|333758476|gb|AFIH01000001.1| GENE 485 438743 - 440566 1838 607 aa, chain + ## HITS:1 COG:SMb20155 KEGG:ns NR:ns ## COG: SMb20155 COG1178 # Protein_GI_number: 16263903 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+ transport system, permease component # Organism: Sinorhizobium meliloti # 14 606 27 615 616 265 31.0 2e-70 MANNMTLKTSTVRRNKIRTYFSKPHNVILLLMGIVLTFTTVAPIVAIIRDTFVIHPGTID AHLTGQSEGFTLINYIDLFTSKLAKTNLWIPLLNTMLLAVGTCVVSILFGGIMAFLVTRT NLAWKKYLSSIFIFPYIMPQWTLAVVWQHMFNSNAVTGTQNGLLAALTGITMPLWWCKGL FPSLLVLGMHYAPFAYILIGGIFRNMDANLEEAATILDTPKWKIMTRITLPMVKPAILST ILLVFGSAMGSYPVPHYLGLTTLSTKYVSMNSKYTGEASVLAIIMMLFGVAIMLMNQISL TSRKNYTTVTGKSGQISKIQLGKLGRYIIALILVILTFFTSIFPILSFAVETFLPNPGDY SFLYTGDLSNLTTKWWITAENITENGMYGQMGILYNNTIRTAFFGTLLVSFACAILAGTI GTLIGYAVSKNRRSKWANYVNAVAFLPYLMPSIAVGVAYFILFSNKYINLFNTYWLLIIV GTIKYIPFASKAALNSMLQLSGEIEESAIILNIPWIQRMTRIIIPIQKSSIISGYLLPFM TCLRELSLFMLLCVQGFILSTTLDYFDEMGLYAFSSGINLILIVTILICNSIVNKVTGAS LDKGIGG >gi|333758476|gb|AFIH01000001.1| GENE 486 440568 - 442184 1713 538 aa, chain + ## HITS:1 COG:MYPU_0990 KEGG:ns NR:ns ## COG: MYPU_0990 COG3839 # Protein_GI_number: 15828570 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Mycoplasma pulmonis # 4 362 36 402 586 192 35.0 1e-48 MPKIQLEHVTKRWNKFYATEDVSLEIEDNAFITLLGPSGCGKTTILRMIAGLETPTSGKI TIGDQVVFDSEQGINIPANKRRVGFLFQNYALWPNMTVQENISFGLQNVKDVLPKVDFET KVIADLARCLEKPAEVKRLTEECKDRNGKIDEKRCLIKLIDYFTISMPTAKKLYAYHLEE GKDVREELAALKKKVQETCIAEGLNEKFQYVKNGEVVKEERKLSAEEMDLALRRVSRIVK IGMFMDRYPAELSGGQQQRVAIARTLAPKPRVLFMDEPLSNLDAKLRLEMRYELQRLHVE TGSTFVYVTHDQMEAMTLATKICLLNNGVLQQYAVPLTVYSEPENTFVADFVGNPSINFI EAKGAQKEDGTIALQLLGKEAVFTPEKELKLAEWFSERDRKKEEREKEQKKRSEEKGYVE KGNKDEIFRYPISYVNGEEGEFHPETMTNEDLLLAVRPEFIDIKSGEGIEGEIYGVMPTG METTVKVRVGEYLLTGMVFGSDLFSIGEKLKLSFKGMKLMLFDRKSGERIGNGSLRFS >gi|333758476|gb|AFIH01000001.1| GENE 487 442532 - 443503 885 323 aa, chain + ## HITS:1 COG:SPy1063 KEGG:ns NR:ns ## COG: SPy1063 COG1840 # Protein_GI_number: 15675055 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+ transport system, periplasmic component # Organism: Streptococcus pyogenes M1 GAS # 6 310 13 313 323 151 28.0 1e-36 MPAEDKRLLIYTSHKEELWKPIVKEFEERTGIWVEVVSGGTNLLLEDIAEKKGEVDADLF FGGGVESLDAFSDYFIPYEAKGIEAVDPQFRSASDVWTPFSALPVVLIYNEKLLSPEELS SWEDVLNPKFRGKIAMANPAHSASAFTGLLSFAEAVREDTDSTEGSDGDKEILPRIAKQL DGKEYADSGEVPEAVADGSKLIGITLEETALKYIAKGKNIGIIYPKEGTTVVPDAGAILK GAKHLENAQKFLDFSISKDCQNILQKRFHRRAVLKSMAGEGEPSLLEIKRLSYDVPKISA ERNRVLTDWSFYMGLIEEEEKAS >gi|333758476|gb|AFIH01000001.1| GENE 488 443500 - 445254 1194 584 aa, chain + ## HITS:1 COG:SP0662 KEGG:ns NR:ns ## COG: SP0662 COG2972 # Protein_GI_number: 15900563 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein with a C-terminal ATPase domain # Organism: Streptococcus pneumoniae TIGR4 # 290 563 276 549 563 128 31.0 3e-29 MKGIASFRRYFQNSFRKRLFGAFLLCSLIPLLLSLLVLFSAFRGSRKEQVDKEGRESLKL IRESIIEEGDSITLALQELSESVELKRALSEERKEGTEVNRLLFSLTEGLRDTVRFDIYD KEGNLRYSTAPYLESRSLPTDWGILQRATRADSPVYESSEGSDSRSRLFQIAVRIKGQRE GGDKEISGYVLASLEEEAFQKLLSGKYGVQNGILLLSSYWRPVYSENILLPTELFSTLRE EFLRGNPLEDSTGEFIYTVTPIEDMGLYLILRQEKPISKNMNFLMLLLLFLSILFGAALS FLMGSMMSRRLFTPIERLRSAMREVTLDHLDVRLRESEDELGELAGRFNRMTEALAENRR ALLLNQESLLKNQKELNEAQIRMLQAQLNPHFLGNTLDAMKWMGKIHQIPEVAEMATDLA DILRFAISPKEFVSLEMEIEILKRYMEIQKIRGFSKIEFHLTVPESLQNALVPRMVLQPI VENAILHGILSEGEIELCAVEQDNELRILVKDNGKGIRKELIGPYSPPKEDLGHHLGLYN VDTILKKHYGECYGLTILDRKEEEGVCGTIVLAVLPLQRERLEG >gi|333758476|gb|AFIH01000001.1| GENE 489 445256 - 446002 597 248 aa, chain + ## HITS:1 COG:SP0661 KEGG:ns NR:ns ## COG: SP0661 COG4753 # Protein_GI_number: 15900562 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain # Organism: Streptococcus pneumoniae TIGR4 # 2 243 3 240 245 156 35.0 3e-38 MWKVLLVEDESLIRKGIRMTVNWGALNCMVVGEAENGEEGLKAVSDLHPDLIITDLRMPK MDGLEMLKKLREEGNEAAVIILTAYDQFSYAQSALRLGVVDYLLKPFHDGELEEAILWIK KKEGEQKEKPLAFSELKTEGMSRYISEAAEYISLHSGNPDLTVGEIAGKLGISEGHLSHT FKRETGQTILSYITGCRIQKATLALKSGKYKVYEVAEMAGYRDITYFSTTFKKLVGKSPS EYQSTAGK >gi|333758476|gb|AFIH01000001.1| GENE 490 446106 - 447188 1063 360 aa, chain + ## HITS:1 COG:CAC0840 KEGG:ns NR:ns ## COG: CAC0840 COG3842 # Protein_GI_number: 15894127 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport systems, ATPase components # Organism: Clostridium acetobutylicum # 1 355 1 352 352 380 54.0 1e-105 MEKTLIDLRGITKSFDGELILDDLNLSIRENSFVTLLGPSGCGKTTTLRIIGGFVQPDKG QVFFEGKDITNLPANKRQLNTVFQKYALFPHMNIADNIAFGLRIRKKSEEYIRDKIQYAL KLVNLQGYEKRSVTSLSGGQQQRIAIARAIVNEPRVLLLDEPLGALDLKLRQEMQYELIR LKNELGITFIYVTHDQEEALTMSDYVVVMNQGYIQQAGSPEQIYNEPENAFVADFIGDSN IVPGIMLEDRLVQIFGANFPCIDEGFGRNKPVDVVIRPEDVEILEDGDDRAILKGTMTHI IFKGEIYEMECTTEDGFEWLVHSTEMHEPGKKVGLYVRPSNIQIMNKPESEDEEAIGVEE >gi|333758476|gb|AFIH01000001.1| GENE 491 447178 - 447996 874 272 aa, chain + ## HITS:1 COG:CAC0839 KEGG:ns NR:ns ## COG: CAC0839 COG1176 # Protein_GI_number: 15894126 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component I # Organism: Clostridium acetobutylicum # 1 266 1 266 277 206 43.0 6e-53 MKNKENTLLATPYLIWMCGFIVIPLALVIYYAFTTKSGAFTLENVGQILLWENYKPLVLA LLLSFASTVLCFVFAFPLALILRNKKIGKGSFVAFIFILPMWMNSLLRILAWQTLLERKG VLNEFLLFFHLPRQNLINTPYAIILGMVYDFLPFMILPIYNTLSKIDDNTIDAAYDLGAS FFTTLWKVILPLSVPGIVSGVTMVFVPALTTFAISNILGGGKIYLIGNVIEQEFTTNSNW NVGSGLSMILMLFIILSMAVLSRYDNGEGAMF >gi|333758476|gb|AFIH01000001.1| GENE 492 447996 - 448793 615 265 aa, chain + ## HITS:1 COG:CAC0838 KEGG:ns NR:ns ## COG: CAC0838 COG1177 # Protein_GI_number: 15894125 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component II # Organism: Clostridium acetobutylicum # 6 252 3 249 260 224 48.0 1e-58 MEKRGKKWLENGYLGFVVLFLYAPIFMLSVLSFNAGRSRAHFSGFSLRWYAEMFQDEAIL QALKNTLIIAFLSAFIATVLGTMAAIAIRKMKKLPRNLIIGVTNVPMLNADIVTGISLML MFIAFRFTLGFNTILISHITFNLPYVLLSVLPKIRQSSQVSYEAALDLGASPLYAFFKVV LPDIMPGVLSGFLLAFTMSLDDFIITHFTRGAGIDTISTLVYSEARKGIKPTMYALSTLI FVTVFVVLLCANFAPGFFERKEKTG >gi|333758476|gb|AFIH01000001.1| GENE 493 448985 - 449170 137 61 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQYISRKDRREAPVICSMLANECGACLSEASSLGARVDERMGQIGNAVGLERNILHKAQL L >gi|333758476|gb|AFIH01000001.1| GENE 494 449198 - 450376 1392 392 aa, chain + ## HITS:1 COG:CAC0837 KEGG:ns NR:ns ## COG: CAC0837 COG0687 # Protein_GI_number: 15894124 # Func_class: E Amino acid transport and metabolism # Function: Spermidine/putrescine-binding periplasmic protein # Organism: Clostridium acetobutylicum # 64 386 35 347 354 253 42.0 3e-67 MLKIMKHIKRELSVCGCSRKIAIVLSLFCICLISVFFIACGRAKDVTNTAEQGEQADAQG DNVVMVYNAGEYIDPEVPKLFEEETGIKVIYDTFETNEEMYPVIQAGGVVYDAVCPSDYM IEKMMQNHLLQEVNFNNVPNIKEIGKDYMKMCEQFDPGNKYVVPYTTGTVGILYNKKMLD ELGVPYPTKWADLWNPKLKGEILMQDSVRDAFMVALKKEGHSMNTVSDAELDEALQDLIK QKPLVQAYVVDQVRDKMIGEEAAVGVIYSGEILYVQGELEGTDVEIDYAIPEEGTNVWFD GWVIPWNAKHKENAEKWMNFLCRPDIAAKNFEYITYPTPNVGALALLDKSYTENKAVFPD MKEVLKKGEVYTYLGEENEAKYNNRWKILKAS >gi|333758476|gb|AFIH01000001.1| GENE 495 450621 - 450869 327 82 aa, chain + ## HITS:1 COG:BH0162 KEGG:ns NR:ns ## COG: BH0162 COG0202 # Protein_GI_number: 15612725 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, alpha subunit/40 kD subunit # Organism: Bacillus halodurans # 11 63 253 305 314 58 52.0 2e-09 MEKNLETFTPIEDLHLMVRSYECLKRAGVDSVEKLKMLSEEDLANVRNLGKRNIVDIQRK LAERDEKNANEGNSVQNDDEKC >gi|333758476|gb|AFIH01000001.1| GENE 496 450964 - 452688 1239 574 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227873795|ref|ZP_03992022.1| ## NR: gi|227873795|ref|ZP_03992022.1| hypothetical protein HMPREF6123_1961 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_1961 [Oribacterium sinus F0268] # 21 574 21 569 569 599 58.0 1e-169 MKLRHRTVAILLLLLCLVPIACKRVEKEDTRKETEEREQTKKKDKEEQRGEKEKKAEEDG EEAVLRGLPHILFAVEGETHSDSDYHYLYQIESTKLKLKEGQKFKALDKAFAEYNKEVDE LYQKERAELENSSHSSEEAKKNVLSSSGNTPESKTNCELIRADKAIVSVLLSKSTDYTGS GMEYSRSAVNFDTRSGKRLSFSDVVTDADSFFMLAEKRAKESVGTDTEFPPELLDKIKEK GSELTWTVNQEGVSVYLDIYEYGKSRREPAVLTVYFEEARDLFEERYTKTEEDYVIPLIG DMHLDLDIDGDGKREAVYLKKKSEDANSVYLDFSAVANGRESEPLEGFDGRAYIVKKSGK YYMYVFVSAEDDITLLYRLDLSTMEKKEGEYWVTDLSTKYYSWRNEGNIETHRYEEENFS DAAGFCGSGRNDILSTNSVEIDWVLDKEAYPRPDGNRYRVTSNHVLRTLKDISVPEVDAK GNVLKESVIPANSYLLFLYSDNESFVDMRIIEEKYVDKENWGGDSSYFNLNDSNQFDYNG PLYRIRMERDTENWITKVNGVEAEELFEGMVYAG >gi|333758476|gb|AFIH01000001.1| GENE 497 452828 - 453898 1041 356 aa, chain + ## HITS:1 COG:BS_ykgB KEGG:ns NR:ns ## COG: BS_ykgB COG2706 # Protein_GI_number: 16078366 # Func_class: G Carbohydrate transport and metabolism # Function: 3-carboxymuconate cyclase # Organism: Bacillus subtilis # 3 349 2 343 349 150 28.0 3e-36 MRSKYVAYIGSYSYTGSAKGITICDVDMEKGKFTKRTEVEVNNSSYMVASRDEKTLYSIA DEGVIAFRIMGNGGLSKLNTKNIRGMRGCHLSVDKSGKYLMVSGYHDGKATLLSLNPDGS VGDIIDGVYDQGIGSVAERTFRPHVSCARMTDDQKYILIADLGIDQVKVFRFDKADGRMR QIDTLRCELQSGPRHFRFSPDRRYLYLLYELKNVIDVYAFHEEEDGDEVSFEKIQTISTF NEKDRDPLIAACQMRFSPDTEASHLFVSNAGINTISIYGRDFKTGLLTMKGSLPIGGEYP KDFCIFPDEKHIAVANNESGTITFLNVDYEHGLLSMSARELAIDEPNCICMVKCTG >gi|333758476|gb|AFIH01000001.1| GENE 498 453963 - 455048 920 361 aa, chain + ## HITS:1 COG:MA0550 KEGG:ns NR:ns ## COG: MA0550 COG0082 # Protein_GI_number: 20089439 # Func_class: E Amino acid transport and metabolism # Function: Chorismate synthase # Organism: Methanosarcina acetivorans str.C2A # 1 345 1 355 365 311 48.0 1e-84 MGGSSFGKIFRISTFGESHGKALGVIVDGCPAGLPLSEEDIQSYLERRRPGKNLKMTQRK EEDRVEILSGTFCGRTTGTPIALLVRNEDQRSKDYGEIAESFRPGHADYGFFSKYGFRDY RGGGRSSGRETLSRVAAGAIAKKLLQELHITVEAEVSELAGISLATPEGKEEADRRILSL RAEGDSAGGVVTCKVNGLCPGIGEPVFDKLDARLAQAVMSIGAVKAVEIGDGILVSRSLG SENNDAFFVEEDNELNKDSACLRLRKESNHSGGILGGMSDGAEIVLKASFKPTPSISKAQ KTVKEDGEPITIEIKGRHDPTVVERACVVVEAMTAVVILDCLLENMSAKLENVKKIYGKE E >gi|333758476|gb|AFIH01000001.1| GENE 499 455071 - 456078 844 335 aa, chain + ## HITS:1 COG:mll3979 KEGG:ns NR:ns ## COG: mll3979 COG3938 # Protein_GI_number: 13473394 # Func_class: E Amino acid transport and metabolism # Function: Proline racemase # Organism: Mesorhizobium loti # 5 334 4 332 333 255 39.0 1e-67 MGLTKSVYAVDSHTAGESTRVVVGGIPKIPGKSMPEKKEWLESRMDYLRTALMLEPRGHN DMFGAILTAPTTEKADYGIIFMDGGGYLNMCGHGTIGAMTVAVETGMVEVTEPITKIVQE APAGMIHGEVLVEGGKAKTVSFQNVPSFLYKQDQEVELPGYGRIRFDISFGGSFFAIVKA EQVGLSIVPENAEKLKELGIALREIINREIPVMHPTLSHIHTVDLVEWWSETETEGATLK NCVVFGKGQVDRSPCGTGTSAKMATLFARGELKVGEPFYYESILGTIFEGKILDTTKVGG YDAVIPQITGSAYITAFNHFVMEENDPLKYGFVLE >gi|333758476|gb|AFIH01000001.1| GENE 500 456417 - 456482 56 21 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKEMIYFSGKKKTRIDARKKK >gi|333758476|gb|AFIH01000001.1| GENE 501 456579 - 456926 104 115 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227872882|ref|ZP_03991187.1| ## NR: gi|227872882|ref|ZP_03991187.1| conserved hypothetical protein [Oribacterium sinus F0268] conserved hypothetical protein [Oribacterium sinus F0268] # 1 110 185 282 821 98 54.0 2e-19 MDYDSLRYGLRSAWILFSPDGKGGGILSFLQAFFSSHGLINAVYSYPKGLELLTAPLSFL PGYGFLLAFQIWIYIAIAFVLYFLLRDRKDAELALGILVFSFFVYRKYGNHHENR >gi|333758476|gb|AFIH01000001.1| GENE 502 456913 - 457578 397 221 aa, chain + ## HITS:1 COG:no KEGG:Closa_3793 NR:ns ## KEGG: Closa_3793 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 2 178 310 481 753 77 33.0 3e-13 MKTDNLTLLLQLLSLYFYGKGERKNSLSMLILTYSLKPTAVVFSTLLFIGFFLDSLIKGT IGTFFFGKGEPEEKRYFHPFDSKKEGSTALLFVSLLFTCLITLRTFWITGLPFSTTFTGI FKAMGFSVKWPFNLDAHVDYSGALSLQETFLSFVKRLFFFLFYPVGEDMAHVGIAWSGIA FPAILFLAAGNALKMILRRFSPGRKKEKGEAKDIELPLVFF >gi|333758476|gb|AFIH01000001.1| GENE 503 457728 - 458372 542 214 aa, chain + ## HITS:1 COG:no KEGG:Closa_3793 NR:ns ## KEGG: Closa_3793 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 5 145 572 710 753 82 29.0 2e-14 MLAPFLYLPALLTTLLTSWAGAVGFTPIDPVNKGYYDHLSVEMEKQAERGSLPLFLKMAE NPRNHILAVAETPECYRIPAVVESITDVEGSGGSPGLYDDPLYFAWFLKWAKTDYIYIER SFLEEEREARAKEMLIQMANLGILIEPEFANLTKTQESLPEYLLVKVNQSRLEYAWREEP YPVLTKEEEEDAKSVLNWIDYGREVKITCVRGPR >gi|333758476|gb|AFIH01000001.1| GENE 504 458438 - 459469 65 343 aa, chain + ## HITS:1 COG:no KEGG:Closa_3795 NR:ns ## KEGG: Closa_3795 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 45 240 20 213 607 126 37.0 1e-27 MQGKDSTEENRRMPENYHLQDDASRKKKRERIFTVLFLFCSFCALMIFAFYVNRHIHIKA LYMDDLYLFSFFREQDFFTFSFPIGNAVRFRPVYWAISYIEMVFVGNDPNRYWYFNVALN GLLACFLCYFSWVVSKGKKIVSFSLGIIFLSAHFAYYQIAQALGILETLALGFSLITLYF LYLQLNEERHFVRNLVLSHLFFFLLVFTHERYIALLPLFYVPLLFRGRVGKNTAVKATST GGNNAETEYKGTEQEKSETRGNEAGKEKRKRGKISFLLRAFFFFFLLPKLIFFMLSVSLP LALSFLRGREARKLRKALNLPMPSKMPSRKSTISSASRKGRNI >gi|333758476|gb|AFIH01000001.1| GENE 505 459490 - 460260 547 256 aa, chain + ## HITS:1 COG:no KEGG:Closa_3795 NR:ns ## KEGG: Closa_3795 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 83 250 318 493 607 145 44.0 1e-33 MAGNIRKLVYASIGVLGITVFLCLIFALIRIFKTEKSIGNSIAVSTDGITGTNTESRTKS SAGKEQKRVKLARLRSFIGNNILFLLFIALCIGSSSVTIRVEMRWVYVSFAASLLYFSYL LGVSRLPLGTLFCLAFICLRLPVERYYRSYFPQIYFWEDQDRMNSLAEETIEKYGREGVL GKQVYILENKYKMSKFYGDTFFQVFDADFSGHGTKIHFIQDLTRLPKNSNRENSLVLEEV PEQRAYRDITGEVFHE >gi|333758476|gb|AFIH01000001.1| GENE 506 460253 - 461737 898 494 aa, chain + ## HITS:1 COG:no KEGG:Closa_3794 NR:ns ## KEGG: Closa_3794 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 20 491 16 453 461 204 34.0 1e-50 MSKEKFRASFLLFVSILSTVFLGFYILSASADIVYSDYIRLTNSYLGEPFSFHDLLTKDI LTRIPVSFLFREINIAFFHYSITFDRFLGLFGLFLTSIPLLLFMAKRRIGGFFSVAILLI FYSLNKWEMLLNGSGYAHFLSFALFYLFFYLLSERVGKGSSLLTLSVFPFLFLLTGGPYA IAVYGATILSLFFLFLAGKIRDKRGSLILLLSSFVSTFLYFLSNHYAVYEYAGAKSISLK EVLLTKMTFVLKFFGFGFSSLLFSGENLEEWLSSGAVQGKQLFLLGGLILLFFLLMALFF LKDLFFGEKGSSDDCIPGKEKDKSLTGLFPALLLLHGLLSFALVFLSRYIFLRPEYAVQS RYALQYQSALLGALLLLYLNTGRQEAGVKKGREKAKLEGNTEKKRGAKRALLRIISVGIT LLFLGGTLHTAKTELLKAPYRRLHYETMLHSVDRIEEMDEEELERLYEYRHGKERILKAF SILKERKLNCFYGK >gi|333758476|gb|AFIH01000001.1| GENE 507 462116 - 462547 259 143 aa, chain + ## HITS:1 COG:FN2010 KEGG:ns NR:ns ## COG: FN2010 COG1846 # Protein_GI_number: 19705306 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Fusobacterium nucleatum # 3 142 5 144 160 124 49.0 4e-29 MNGGFLVTKIKQLGDRTFERILSKKGIDAFNGAQGRILYALWQEDGVSIKTVSKKCGLAI TSLTTMLERMEKSGLIRREQDQQDKRKTRLYLTEKSHSLKDDYDDVSAGMGRIYYKGFSE DEIIQFESYLERVQTNLEGWREE >gi|333758476|gb|AFIH01000001.1| GENE 508 462544 - 462927 301 127 aa, chain + ## HITS:1 COG:no KEGG:EUBREC_3491 NR:ns ## KEGG: EUBREC_3491 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 1 114 1 114 229 213 82.0 3e-54 MSICIKDRIQNMNLVIGCTVGCQYCYARNNVKRWHMIEDFSKPEFFPRKLRMMDKQRPQN SLLTGMSDFAGWQDEWRSEVFAKVRENPQHQFLFLSKRPDLLDFDTDLENSWFGKYGKKE KIKNPIQ >gi|333758476|gb|AFIH01000001.1| GENE 509 463266 - 463670 311 134 aa, chain + ## HITS:1 COG:no KEGG:Lebu_1625 NR:ns ## KEGG: Lebu_1625 # Name: not_defined # Def: hypothetical protein # Organism: L.buccalis # Pathway: not_defined # 1 134 1 134 134 163 71.0 3e-39 MQHKNIKKDCEELWAKNKYYVLSKSHKAYLDIREYLKEKEVDIAYLQEKIQSVKDIEESK KDFNNAILHVWGYFKKDASETEKQGLFEILEEYMKGENSQEAVIQYLNALLRKYPNQYLE ESTFLAGENYETMA >gi|333758476|gb|AFIH01000001.1| GENE 510 463654 - 464022 166 122 aa, chain + ## HITS:1 COG:no KEGG:Lebu_1626 NR:ns ## KEGG: Lebu_1626 # Name: not_defined # Def: hypothetical protein # Organism: L.buccalis # Pathway: not_defined # 1 122 1 122 122 200 85.0 1e-50 MRLWHEQLIPLLPKNQLLGQHRECCALRGNGWNKKHKTVDYAFSYSPYHLFIFHSLVMDE MEKRGYKVSEEWRDKNYRGKTAEKYDNLEEKMIESPIYKEHNGEYLLECIENLRNKGIKI EL >gi|333758476|gb|AFIH01000001.1| GENE 511 464130 - 464585 516 151 aa, chain + ## HITS:1 COG:BH0948 KEGG:ns NR:ns ## COG: BH0948 COG1225 # Protein_GI_number: 15613511 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Bacillus halodurans # 1 148 1 147 154 163 54.0 1e-40 MLEVGTKAPDFTLPDQNGNVHSLSDYRGKKVILYFYPKDNTPGCTKQACGFAERYPQFTE KGAVVLGISKDSVASHKKFEEKYGLPFTILSDPELKVIQAYDVWKEKMNYGKVSMGVVRS TYLIDEEGKIVKSFDKVKAADNPEQMLGELS >gi|333758476|gb|AFIH01000001.1| GENE 512 464587 - 465336 516 249 aa, chain + ## HITS:1 COG:NMB0895 KEGG:ns NR:ns ## COG: NMB0895 COG3022 # Protein_GI_number: 15676791 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 1 248 1 256 259 139 34.0 4e-33 MRIILSPAKKMRYDENGPAYRDLPVFLSDAEKIKSVLKEKSFSELKALWACNDKITEQNI ERLSSMNLREKLTPALLSYDGIAYQYMAPTVFETEMLCYVQEHLRILSGFYGILKPMDGV SPYRLEMQAKFELYGAKNLYDYWGDRLYRELRDSSGIIVNLASKEYAKCIEKYLQPGDRY ISCNFYEEAQEKPVQKGVYCKMARGEMVRFMAENRVEEPEGIKDFAVMGYRYAKELSSEK EYIFVRKKA >gi|333758476|gb|AFIH01000001.1| GENE 513 465347 - 465691 329 114 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|323142183|ref|ZP_08077018.1| ## NR: gi|323142183|ref|ZP_08077018.1| divergent AAA domain protein [Phascolarctobacterium sp. YIT 12067] divergent AAA domain protein [Phascolarctobacterium sp. YIT 12067] # 1 111 334 439 443 92 50.0 6e-18 MDSYFGKWKQPSIICSDNAFKIVLPNTNAGQIVKEDSVYYSVDSSSVAPSATLLSAEEKI LQVLSAQKEITRKEVQELLEVSQSTAGRILKTMVNRGQIIKLGGSLTTRYKTNL >gi|333758476|gb|AFIH01000001.1| GENE 514 465592 - 466149 91 185 aa, chain - ## HITS:1 COG:MA2121 KEGG:ns NR:ns ## COG: MA2121 COG2865 # Protein_GI_number: 20090964 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen # Organism: Methanosarcina acetivorans str.C2A # 31 163 221 353 458 81 34.0 7e-16 MIKESDGDSFEEMRSIKQSLSFDSLKNIFKDRREFSGSLMQQLHDVYDYIDFHNQVHASF HKLLRIDNRDYSEVAVREALLNSLVHRDYSIHADTLISIYKDHMEFVTLGGLLPGLELDD IKMGISVCRNPQLANVFYRLQLIEAYGTGIKKSWTATLENGNSPPSSVAIMPLKSSFPIP MQDKS >gi|333758476|gb|AFIH01000001.1| GENE 515 466146 - 466313 127 55 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225377009|ref|ZP_03754230.1| ## NR: gi|225377009|ref|ZP_03754230.1| hypothetical protein ROSEINA2194_02653 [Roseburia inulinivorans DSM 16841] hypothetical protein ROSEINA2194_02653 [Roseburia inulinivorans DSM 16841] # 4 46 142 184 356 66 69.0 7e-10 MCSVDFNSLTVVTQKVASSIDKIYAYYRKQDWHYQQYIACLNSLNEPQVIQPSGK >gi|333758476|gb|AFIH01000001.1| GENE 516 466361 - 466933 391 190 aa, chain + ## HITS:1 COG:FN0712 KEGG:ns NR:ns ## COG: FN0712 COG2059 # Protein_GI_number: 19704047 # Func_class: P Inorganic ion transport and metabolism # Function: Chromate transport protein ChrA # Organism: Fusobacterium nucleatum # 12 183 8 177 186 85 31.0 4e-17 MEEKDRKFVLWKLFISTLYLSTFTFGGGYVIVTLMKKKFVDEYHWIKEEEMLDLVAIAQS SPGAIAVNGAIVVGYKLVGISGAMVAILGTILPPFLILSIVSMFYQAFRSNWFISWMLEG MQAGVGAVIVSVTIDMGIPIVKEKDIVSLLIMMLVFVASYIFGVNVVYIVLACGAFGTIR TLLCTRSAIK >gi|333758476|gb|AFIH01000001.1| GENE 517 466930 - 467484 280 184 aa, chain + ## HITS:1 COG:FN0713 KEGG:ns NR:ns ## COG: FN0713 COG2059 # Protein_GI_number: 19704048 # Func_class: P Inorganic ion transport and metabolism # Function: Chromate transport protein ChrA # Organism: Fusobacterium nucleatum # 1 135 1 135 176 102 44.0 5e-22 MIYLQLFWSFVQIGLFSFGGGYAAMPLIQGQVVTAHGWLSIAEFTDLITISQMTPGPIAV NSATFVGLKIAGVPGAIVATLGCILPSCIIVTLLAKLYLKYRKLDILQGILHSLRPGVVA MIASSGAFILVNAFFGGKQGILLQTKWEMVAIFIVALLLLRKTKINPISVMLIAGVLRVV SSIF >gi|333758476|gb|AFIH01000001.1| GENE 518 467602 - 468963 1039 453 aa, chain + ## HITS:1 COG:BS_ynaJ KEGG:ns NR:ns ## COG: BS_ynaJ COG2211 # Protein_GI_number: 16078820 # Func_class: G Carbohydrate transport and metabolism # Function: Na+/melibiose symporter and related transporters # Organism: Bacillus subtilis # 5 441 7 437 463 137 24.0 5e-32 MDEKKYLKWYNKLGYGSGDLAGNVVYAFLSSFVMLYLTNTVGLNPGIVGTLIMVSKLFDG ISDMFFGTMIDKTKSKLGKARPWMLYAYIGCAVTLVANFAIPDNLGMTAQYAWFFLAYTL LNAVFFTANNIAYASLVTFCTKNSKERVEMGSLRFIFAFSTSLIIQSVTVQFVRYLGGAA AAWRTVAIIYAVIGLVVNTISVFSIKELSEEELNAGKEHIEEKYGLIEAAKLLFSNKYYL MICMAYICQQIYSAMLNMGIYYMIYILKNENLYSVFSWAINIPVIIAMCITPMLVEKMNG LYRMNLAGYILGTAGRVGVIFAGYMGSVPLMLAFTAIAALGMAPWQGDMGAVVASCSEYT YLTKRKHIDGTMYSCTSFGTKIGGGIGVALCGWLLEASGFVKESAVQPESCLSMLYVMYL WIPMILSLCITFIMSKMNVEEANQQLKAQIEGH >gi|333758476|gb|AFIH01000001.1| GENE 519 468965 - 469027 62 20 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTDPAITAELSQQEDDGFST >gi|333758476|gb|AFIH01000001.1| GENE 520 469175 - 471079 1268 634 aa, chain + ## HITS:1 COG:BH2723 KEGG:ns NR:ns ## COG: BH2723 COG3250 # Protein_GI_number: 15615286 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase/beta-glucuronidase # Organism: Bacillus halodurans # 5 630 7 614 1014 605 49.0 1e-173 MNACIKWLDNPEIFRVNQLDAHSDHSYYMDYADMGKTDNPLSQSLNGQWEFAFSKNAASR PGNFYEEGFDASGFDKIMVPGHIELAGYDKIRYINTMYPWEGKEYHRGAYSLDSTGAEEG MFSEASYNPVGSYLKHFDLKPTMLGKRIRICFEGVEEAMYLWINGKFVGYAEDSFTPSEF DLTPYIREKNNILAVQVHKMSTAAFLEDQDFFRFFGIFRNVTLKAVPDVHMEDVWFKPVL NPDNEHGSVAVSMKVSVRKQVAVHAQFVLRDREGNVVAENSVPLQVLNGNLTGEIYTDVG VIKSWDNHHPYLYQATIALKNAENGELLELVPYDIGFRRVEIIDKVIYLNGKRLVITGVN RHEWSPKTGRCIGMEEMHSDMACILKNNINSVRTCHYPDQIPWYFLCDEAGIYVMAECNL ESHGSFQKLGAIEPSCNVPGSIPQWKEAVMDRARTSFETFKNHTSILFWSLGNESYAGDD IEAMNVYFKDKKDGRLVHYESSYYNRAYEDTISDIESRMYAKPKDVAEYLSDKPKKPYIL CEFMHDMGNSMGGLGDYMKLIDEFDLYQGGFIWDFIDQAILVKDPVTGKDVLRYGGDFED RPADYEFSANGILFADRREKPAMQEVRYYYGLYR >gi|333758476|gb|AFIH01000001.1| GENE 521 471063 - 472016 447 317 aa, chain + ## HITS:1 COG:BH2723 KEGG:ns NR:ns ## COG: BH2723 COG3250 # Protein_GI_number: 15615286 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase/beta-glucuronidase # Organism: Bacillus halodurans # 9 316 728 1011 1014 150 32.0 3e-36 MAYTDNEKLRVVYGDFTLGVHGEGFSYIFSYAQGGLESIVKDGYEWLFRCPKPTFWRALT DNDRGSKFHIKSGHWLAADMFIDCQDITVIMDGAVQNCKAPDNNSYGGDVSANEITVKYL YKTISVPVTTVMVSYTVNTSGKIKVDVHYDGKKDLPEFPVFGIRFIMPTLAEKYIYKGLS GETYPDRKAGAQQGVFEVTDLSLTPYIVPQECGMRMDTEWLEVTRRTSLDNSKTDGSNHT LRIEKADAKFDFSCLPYTASEIENALHHEELPPARRTVLCIYGAVRGVGGIDSWGTDVEE AYHISAEKDIDYSFYIC >gi|333758476|gb|AFIH01000001.1| GENE 522 472124 - 472297 98 57 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227874259|ref|ZP_03992456.1| ## NR: gi|227874259|ref|ZP_03992456.1| transposase [Oribacterium sinus F0268] transposase [Oribacterium sinus F0268] # 1 55 409 463 507 103 89.0 6e-21 MRQNHCTSDGEIADKMIPSIDEDVATEEEHYDGFYAVCTNLEDDVATIISIKENKSS >gi|333758476|gb|AFIH01000001.1| GENE 523 472272 - 472625 136 117 aa, chain - ## HITS:1 COG:no KEGG:TepRe1_1316 NR:ns ## KEGG: TepRe1_1316 # Name: not_defined # Def: transposase IS4 family protein # Organism: Tepidanaerobacter_Re1 # Pathway: not_defined # 1 99 1 99 582 80 42.0 2e-14 MKVSVSKSKNQSIYYLSKSVWVDGKSTTKTIEKIGSEDELLKVCGDLTPLEWAKQYAAKR SAEEKASKKDIMLKYSSSTLIKKESCRSVNVGYLFLKDIRKTSERFQAFYASESLYF >gi|333758476|gb|AFIH01000001.1| GENE 524 472985 - 473257 280 90 aa, chain + ## HITS:1 COG:SMb20632 KEGG:ns NR:ns ## COG: SMb20632 COG0395 # Protein_GI_number: 16265292 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Sinorhizobium meliloti # 2 87 82 167 287 63 39.0 1e-10 MNSTLVSLSATLLALLIYAMGAYVFAKYNFPGKNLLFILYSITLLVPAQSKAQPIFFLLI HLNLYDSLPGLSLVYISMGLAMSIFVLMRL >gi|333758476|gb|AFIH01000001.1| GENE 525 473571 - 475367 1156 598 aa, chain + ## HITS:1 COG:SP2190 KEGG:ns NR:ns ## COG: SP2190 COG5263 # Protein_GI_number: 15901997 # Func_class: R General function prediction only # Function: FOG: Glucan-binding domain (YG repeat) # Organism: Streptococcus pneumoniae TIGR4 # 479 581 511 601 693 78 43.0 4e-14 MPKVSFAGDQLIPEVRLTGSPTSISAGTLPDPNVKSETAHVKARVFEYYLTALKHGYDWR WWNENEDYWDDFRVGKKSEYHYHTPIAYADGTRYGLKVWITTDEGYSIDESTKIYFNNQE YNNVGKTKIYCYGRDSYVTLDLGIATGTANLYTIEYDSKGGSAIPSQTVEEGHLSALWQS PKKDACTFLGWYLDEEGTREFDNKEPIRENMTLYAKWRVNKLLPEIRLYSDTTVLSAGVV PIVKVKSTTEQVYQVFLPDSNEVWQHWDEMFENWEPLSKTGSMVAKKDGTVYGLWIQLFF QDGYYVNEKTKVYFNDRECLSLGHTAFYPKSSMGWEYAHLYLDYGRVGTGVFSDRSQFEE DSITGDSSIEDSDGNGNSGSESGSHSDSSGSGGTDSSSASGSVSTGSGSSSGSLGSSAGN FSGGGGSSTGASSGGGGASGSAKVSSGTAGQVLGVERPSFDGKWMQDAKGWWIQYGDGSY PRNEWKLLPWNNTTAWYFFDEAGYMKTGWLNHNGKWYFLSTVSDGSLGAMKTGWLQDTSD GNWYYLDSVSGEMKTGWQEVSGKRYYLNTEKSRPFGAMYRNEKTPDGMQVDESGARIG >gi|333758476|gb|AFIH01000001.1| GENE 526 475394 - 476119 514 241 aa, chain + ## HITS:1 COG:CAC0284 KEGG:ns NR:ns ## COG: CAC0284 COG0846 # Protein_GI_number: 15893576 # Func_class: K Transcription # Function: NAD-dependent protein deacetylases, SIR2 family # Organism: Clostridium acetobutylicum # 4 240 5 245 245 292 60.0 5e-79 MYEDKIAALQEIIDESENIVFFGGAGVSTESGIPDFRSEDGLYRKKYSYPPEQIISHSFF LTKPEVFYRFYKEKMLCLDAEPNAAHRKLTELEQVGKLKAVVTQNIDGLHQKAGSKIVYE LHGSIHRNYCLSCHKFYPAKFIKESDGVPHCSCGGVIKPDVVLYEESLDSKTIEGAVTAI TKADTLIIGGTSLVVYPAAGFIDYFRGKHLVLINKAETGRAVRAELSIHAPIGEILGKIV L >gi|333758476|gb|AFIH01000001.1| GENE 527 476262 - 478469 2176 735 aa, chain - ## HITS:1 COG:CAC0120 KEGG:ns NR:ns ## COG: CAC0120 COG0840 # Protein_GI_number: 15893416 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Clostridium acetobutylicum # 366 735 197 515 555 205 37.0 2e-52 MKQVRSRKKGDFFKKLKLSTRMSLFLGAITFLFLTALLYCLIHSFEVAIDKKIDDNLSDK AKAASSGFESVVSNVESISDNLLYGVQMILSAPPETPGAAPVNPWKIATADGEEPESTAP MGPVTLRSQIVNSEISYSKHVGEVFIVNSIYSLLEGNPDVIGAGVLMEPNAFLPNVRDYS PYMTQSSKKEMVLTNYQYEDIADEDYYQTVKESKSKYATDLYTEEENGEKYTEMTFSNPI IVNGEFKGTIITDVNASVLSTIHQKDANFPSMFTNVMDESGVIYSENPDFNGRALKDILP EKAMSQIQSGFDTGKAFSRKIVNELGVEKREFYNPIDLNGRLWWVRLSITEADYDREVDR MVNMGVLFGVLCVIALCIITTVIIRKSLKPLKLVSDAGKKLSDGNFDIAFNYKREDEIGE LMQAMKSVVDRIRSIITDLSEKLTELSHGNFAMNLEDEHGYYQGAYRPLLNSLKDITDDL SNTVSEISSSADQVNNGAEQVSSASQSLSQGATEQASSIEELSATMNDISDKIKDTALMA EKASSMSKDAGAAVCESNGKMSELSLAMQDITEKSNEISKIIKTIDDIAFQTNILSLNAA IEAARAGAAGKGFAVVADEVGNLAQKSAKAAQNTGELIAEAIDAIAKGAKISDETAVSLQ NVSERTETINRIIKDIAAASESESEGITQISVGMDQISSVVQSNTATAEESAAASEELSG QAQILNDLMSKFTLK >gi|333758476|gb|AFIH01000001.1| GENE 528 478384 - 478593 72 69 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAPRKRDILVLNFSFLKKSPFFRLLTCFILLSSLKVNPKSLKTAVWNKTTVRFSNRQVEM ILRQPVHVL >gi|333758476|gb|AFIH01000001.1| GENE 529 478588 - 478740 96 50 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEDCICLFPNGILRLFELQLLQLCDYRSNDILFSSLGNLIYLFLLLTDYL >gi|333758476|gb|AFIH01000001.1| GENE 530 478861 - 480249 1042 462 aa, chain + ## HITS:1 COG:SA0180 KEGG:ns NR:ns ## COG: SA0180 COG1114 # Protein_GI_number: 15925890 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid permeases # Organism: Staphylococcus aureus N315 # 1 440 1 431 449 293 42.0 6e-79 MEKKIGFREIVFVASMFFGMLFGAGNLIFPVSMGQKAGMETLLASLGFCITGVGLPLLSV VAMAVSKTSSMTDMARLVGKRFSYFFTTLLYLCIGPLFAIPRTATVPFQVGMVPYLPENT HKMMLFLFSLLFFGIALVLSLKPGKLLTYVGKVLNPIFLLFLSVLLLTALIFPMGKMEAF PATAGYEEGSLLKGLFEGYNTMDVVGALAFGNILIQTIRTLQGENAVGEENRATEQIPFV TMLSGAMAAGMMVVIYFALAIVGAQSRAVFSVQENGGDVLHSVSTYYFKSYGGILLAVII FFSCLKTAVGLITSTAMAFVEMFPKSLPYKAYVCLFTFFSFAISNVGLSKIISYSVPALF FIYPMSMVLIVLCLFGRFYDFSGKVFRYCIYFTLPFAFLDSLKILLKGGLKDFSFSHSLL SLFGHIPLFNKGLTWLIPSLLGFALGIFLWYTDKVREKSGTV >gi|333758476|gb|AFIH01000001.1| GENE 531 480318 - 481088 879 256 aa, chain + ## HITS:1 COG:alr2825 KEGG:ns NR:ns ## COG: alr2825 COG1208 # Protein_GI_number: 17230317 # Func_class: M Cell wall/membrane/envelope biogenesis; J Translation, ribosomal structure and biogenesis # Function: Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) # Organism: Nostoc sp. PCC 7120 # 1 256 1 257 257 303 55.0 2e-82 MKVVILAGGLGTRISEESHLKPKPMIEVGEMPILWHIMKYYSSYGLNEFIILAGYKQYVI KEYFANYFLHNADITFDMGRNTMEVHNSEAEDWKVTVVDTGLHTMTGGRIKRVEKYLHDE PFMLTYGDGVSDVNLQELLDFHKKKGKVATITMVNLTQQKGVLDVDQDGIIHSFREKEEK DGAVINGGFMVLEPEIFRYLQDDRTILEQSTMQALASEGKLAGYYHPGFWQCMDTQREKK LLEELWASGKAPWKRW >gi|333758476|gb|AFIH01000001.1| GENE 532 481090 - 482232 1007 380 aa, chain + ## HITS:1 COG:STM2091 KEGG:ns NR:ns ## COG: STM2091 COG0451 # Protein_GI_number: 16765421 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Salmonella typhimurium LT2 # 8 380 4 359 359 319 43.0 5e-87 MIGFDDLKEFYKGRRVFVTGHTGFKGSWLTLLLEELGAEVYGYSLPAKEGELFSILYPKP PIYSFEGDVRNYEQLRSLMEWAHPEVVFHLAAQPIVRESYLFPRETYETNVMGTVNLLES IRHIPSVRSVLNVTTDKVYENNDMEHHAFTEEEKLDGFDPYSNSKSCSEILTHSYQKSFF NEEKEENGQRVLPRISTARAGNVIGGGDFAKDRIVPDAVRAVVQGQKIGVRNPYSVRPYQ HVLEPLLVYLEIAARQTGFVKGLCKEKFSYEQGKRFEGYYNVGPSVEDAITTGELTDLFV KFWGEGAAWENLSEKNAPHEAGFLQLNTNKVRRTFQWEPRYTVKDAVKETVAWYKAWSEG KDMRKFSVEQIRHFFCESHR >gi|333758476|gb|AFIH01000001.1| GENE 533 482353 - 483219 590 288 aa, chain + ## HITS:1 COG:SP1274 KEGG:ns NR:ns ## COG: SP1274 COG3475 # Protein_GI_number: 15901134 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: LPS biosynthesis protein # Organism: Streptococcus pneumoniae TIGR4 # 1 278 4 254 269 95 28.0 1e-19 MDLKEKQEKGLGILLEIDRICEKHQISYRLDAGTLLGAIRHKGFIPWDDDVDLCFLREDW EKFSKVAQKELSENFALLLPDAFQGGKAFYDFVPRVVDLSTERRSEKTEGDTFYEGKLNH LWVDCFILDDLPAKALWAKFYTFRQQLIFGLAMGHRRMVNLKKYKGLSRLFVSVLSKLGR LFSMPYLFSLQDAWAQAEGKRRKTKAKRKAVTANPEKGERFLYFSNYQPDFQYCISRYSW EKPLLRAKFENYSLPIPKGYDALLRMLYGRYEMLPKKENRVPAHEEMI >gi|333758476|gb|AFIH01000001.1| GENE 534 483216 - 484199 435 327 aa, chain + ## HITS:1 COG:BS_ykcC KEGG:ns NR:ns ## COG: BS_ykcC COG0463 # Protein_GI_number: 16078354 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Bacillus subtilis # 5 322 8 311 323 204 36.0 2e-52 MKNCSIIVSVYNEEASLENFFEACSSVLNTCRAGSKKDSACEKIVEKYHTEILFVDDGST DRSPLILDRLALEYPELVKVIHFSRNFGHEAAMTAGLDYASGDFLIFMDADLQHSPELIP EMLARYEEGFHVVSMVRTKNSSAGILKNLSSAAFYWVLNHLSPLHFEANASDFFGISSAV QQVLKKYYREKVRYLRGYVQSVGFSKTKIEYEAGVRQGGKSHYSLRKLWAFSRNTLLSFS NLPLKLGIFASGCSMFLGILLLVYTLLTRKGAPSGYATIVVLLCFMFAVLFFVVGIIGEY IALLFEEIKDRPIYVVSKTMNLPENSE >gi|333758476|gb|AFIH01000001.1| GENE 535 484263 - 485267 842 334 aa, chain + ## HITS:1 COG:Ta0344m KEGG:ns NR:ns ## COG: Ta0344m COG2605 # Protein_GI_number: 16082515 # Func_class: R General function prediction only # Function: Predicted kinase related to galactokinase and mevalonate kinase # Organism: Thermoplasma acidophilum # 1 325 1 320 323 206 41.0 6e-53 MIITKTPFRMSFFGGGTDMEDYFKEYGGAVLSTSFDKYCYVNVRHLPPFFQYSTELSYSK TERVNSLDEIQHPAIREAMRMLNMQEIRLMYEADLPARSGLGTSSSFAVGMLHAFHALKG KYVDKKTLADQAIYLERVLCNEAGGWQDQIAASYGGLNRIDFSAEGYRVSPVLISPERKK KLNENLMLFFTGFTRFSSEIQKANQSSSPEDKLALLRDMKELVNEGESILCNQDRDLDDF GRLLHTTWELKRRTAKSISTDSIDQLYTIGMRAGALGGKLLGAGGGGFLLFYVEKEKQEG LMEAMKDLLYIPFSFENGGTQVVYYSPETFEKKV >gi|333758476|gb|AFIH01000001.1| GENE 536 485273 - 485698 289 141 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227872230|ref|ZP_03990591.1| ## NR: gi|227872230|ref|ZP_03990591.1| hypothetical protein HMPREF6123_0530 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_0530 [Oribacterium sinus F0268] # 38 137 34 134 139 101 51.0 2e-20 MLSEWLDYLRTGFQSTAGDSFFSLLFGVFLFLQLLALYRRFSILKTGGHFWDSYHITGDT LYIHAGLFCIGRRDVPFSEMRTVDIDYTRGKGGARFTVKIHREKGLIKCFVIPADEKGKR QLKDLERALFQHRIAVRKWGY >gi|333758476|gb|AFIH01000001.1| GENE 537 485987 - 486187 129 66 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPFSEMASVQISQGSGRGGRRYIVKIRRKKGITKYFMIGVNKRGLQKLEELKKALKKHRV GVKEWG >gi|333758476|gb|AFIH01000001.1| GENE 538 486215 - 486475 105 86 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAPENTLYVHAGFFFRGRRDVPFSEIRRVHIYYTRGRWCGSYTLQFHREKGVYQFLVLPG DKKGEKQLKELERIFFQHRIPVTKRG >gi|333758476|gb|AFIH01000001.1| GENE 539 486698 - 488587 1628 629 aa, chain + ## HITS:1 COG:SP0391 KEGG:ns NR:ns ## COG: SP0391 COG5263 # Protein_GI_number: 15900313 # Func_class: R General function prediction only # Function: FOG: Glucan-binding domain (YG repeat) # Organism: Streptococcus pneumoniae TIGR4 # 28 139 232 340 340 79 40.0 1e-14 MNRYRKEKIEGTLVLFAFLFWMVFFFSYFFRIDAFAEGKWVELSGAWQYQENGVVHKGWL HLGDSWYYLDPTSGKMADGWILDQGKWYFLKTDAREQGKMATGWTWVDGNCYFLKENGTM ASNESVGGYQLSADGQWTEQGKAVFEKDKGYAKSHNAYLQKVAAQGTAAETSASGENASL GAGSSSGGGLAIRKGSGGGGGGGGSSSGGSGGGGRSSFSGSSGSSSGGGFSSGAYSGASS GVPSSSSGTPGKEDHSAFTPGETASKEEGNRENSTSEEIADVEEDSETEAEGSEAETTTE EIEVKTEEEHQRDADQVERELQEGKNRNTAQYTASNGEIYTAFFVQGVHIPNLKSTEEGG DFIEREDSGYFTRMAKFVRGQGYYDTNKARNGENKDVDRNLCFATTASNVLHWYLQENRE KIQAYIDLHGDEVRRVGQENYSLQDFLNQSDPNQWNSTIFDYFKLIYGHSDKGFYTGPLV DLFLNGYTPKKPANVEEDFETMDERGGFLYGLLREELQTDVTESFRGSFSEDVKYHLAAG HALCISYKPSKAYSHVVSLWGADFDESGKLVGIYVTDSDDQDETGEDPEVGLKYYRITYR NEWPYMNNSLSPKRNGSRITKLHSFGWKE >gi|333758476|gb|AFIH01000001.1| GENE 540 488862 - 490355 1700 497 aa, chain + ## HITS:1 COG:no KEGG:Rumal_0322 NR:ns ## KEGG: Rumal_0322 # Name: not_defined # Def: hypothetical protein # Organism: R.albus # Pathway: not_defined # 46 487 31 424 507 70 22.0 1e-10 MRKYWILGASAIILASSVMACGKKEEAATTAAGTEKAAETTAAAEEKKDYVFVKMTVPYA DFYYGELKDIAPEEGKDVKAQLDAEDKVAKDGFRESGMYDSVSSPTKEKVEKFVMADGAV EGEGSVYKGIKHVNVAIPKSLYEDAKKALEEKKESKNALLTLMGAIESEVGTEPKEYKVL NSDGTLSKTQGTTNEAKDVKADITTTSSYGNYEIDVDGLDIDSEIVQAAILETKDGAKYG LKQEDNIWVKPEELAFSAVAFEDKNHKAQKEFKRFEDLQDKDIVKITYFLMDEDDVELPV NLHVKKIAPAEYKVSGDEKVSYSPEGTKVNYQLSTGEDSYALSKVLSKKSEVKGEVNTDT AGVLVLPKEMTPGKYQLVFSNDKLSDVSFTVLVESSLKAEDFHFENNKLSLAENADQLTI ANYIASTSSASIGEQEFKGGAGRRFGKNIFNEDGSVNTEASYKKDDQEVKYFDGPGTYPV SIKADGYPEVKFEVVVQ >gi|333758476|gb|AFIH01000001.1| GENE 541 490352 - 491572 804 406 aa, chain + ## HITS:1 COG:TP0572_1 KEGG:ns NR:ns ## COG: TP0572_1 COG2717 # Protein_GI_number: 15639561 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Treponema pallidum # 67 217 69 218 270 108 41.0 2e-23 MIVILTLLCSLAFFHFFGKAVKKKPAVLYGICILLSLVSIFYPREGGLPFLDFFFKKIMQ RGVLAGSLFIWVMLAPVLPKSFSGRKTIYLLRGEMAICASLITLAHNLAFGGKYFGALFF GQGHISLMELHAAIVSCLMILLLIPLTVTSFQAVRRKMQGKTWKKLQNWSYLFYLLLYLH IFFIYQGALLRGKGEYFFTLMLYSFIFGFYGFLRIRQYRMQKESKEKKAFPLLRIAGILP IVCLFLSGFYSAGKYRAALEANVDKIRAQESVAESIGNGEENNSSEKASEASGDKASTNS SDASSDSQAADEDNISGAYKDGECFGKASAYNGNVEVKVTISGGKITAIDIVKTKDDEEY FFDAQKKVIPEILEKQSTDVDAVAGATTSSEGICHAVQKALEQAKQ >gi|333758476|gb|AFIH01000001.1| GENE 542 491881 - 492684 744 267 aa, chain + ## HITS:1 COG:no KEGG:Apar_0265 NR:ns ## KEGG: Apar_0265 # Name: not_defined # Def: hypothetical protein # Organism: A.parvulum # Pathway: not_defined # 1 259 1 254 258 246 46.0 6e-64 MRTIFDTETVHFEAKGMLGGGHSLTVSKDGFSYQSANGKKAFSFPFSAIKRTLITNYCNS NQSYDVRCYLKDSKEIPEFELDTRAWNNGHNIKETKALLVALSASKLGSAFPNNLDSLET DLGFTLGEKDITLKDGMIIGAKHQIPLHAIKRCKCVSNGTLGYLCVYLKEKGGFFIDMPD MKLPINEVTLPVLEAAMRRNTGNGIDFSRGNGFDQKDSGYIIIRYMNADFFISEDGTFRE SWQESAYRRIYAYGYDVDTNWCERMGQ >gi|333758476|gb|AFIH01000001.1| GENE 543 492700 - 494052 1181 450 aa, chain + ## HITS:1 COG:STM2090 KEGG:ns NR:ns ## COG: STM2090 COG0399 # Protein_GI_number: 16765420 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis # Organism: Salmonella typhimurium LT2 # 11 442 7 431 437 500 55.0 1e-141 MGKWKSEAEAREEIKNLVAEYYHSFKEKKKAFEPGDRVSYASRVFDEKEMLSLTDATLDF WLTTGRFADEFEKKFAEWIGVKHAYLVNSGSSANLLAFMTLTAPELGERQIKRGDEVITV ACGFPTTVTPMLQYGAVPVFLDVTVPEYNIDVSRLEEALSEKTKAVMIAHTLGNPFNLEI IKKFCDKHGLWLIEDNCDALGSRYTIDGETRFTGTWGDIGTSSFYPPHHMTMGEGGCVYT NNPKLSRLILSFRDWGRDCICPSGQDNFCKHRFSGQYGQLPKDYDHKYTYSHFGYNLKVT DMQAAVGVEQLKKFPSFIEKRKANWAFLKEAMSDIDGLILPEPATNSDPSWFGFLLSVKE DAGVKRNDLTAFLENANIQTRLLFSGNLIKHPCFDQIRGTDAYRVVGDLKNTDFIMENSF WIGVNPGMTNEMLQYMADKIHEGMRECKKN >gi|333758476|gb|AFIH01000001.1| GENE 544 494221 - 494991 578 256 aa, chain - ## HITS:1 COG:no KEGG:Cphy_1940 NR:ns ## KEGG: Cphy_1940 # Name: not_defined # Def: SCP-like extracellular # Organism: C.phytofermentans # Pathway: not_defined # 103 254 85 240 242 78 33.0 3e-13 MKSRFSKKQIAGTVMAVFLSLSSTIPGLAQDSGWHKDEGTNRWWYSLPDGTFYKSSWQWI DGNGDGTQECYSFDSDGYLYTDWITPDGFTVNADGAWTVDNIVQQRKVQELNVEQSKVST TPVLGINDTSQEEYLSNKEAYRDEVLRLVNRYRKKLGKPALEKDENLQNLAQIRAEEISE LYSHTRPGTGEPLHWQDGVNGEVIMRLVKIPDGAFSAWTHSKGHDKLLKEKSFKRAGVGY YVTEDGKQYWVMLFRE >gi|333758476|gb|AFIH01000001.1| GENE 545 495091 - 495825 604 244 aa, chain - ## HITS:1 COG:SP2136 KEGG:ns NR:ns ## COG: SP2136 COG5263 # Protein_GI_number: 15901950 # Func_class: R General function prediction only # Function: FOG: Glucan-binding domain (YG repeat) # Organism: Streptococcus pneumoniae TIGR4 # 31 132 525 621 621 70 36.0 3e-12 MIRTEKRLLFLLLLLLFLIPGKAAFAEKGRWVQLGKEWTYADEFGNVIPGWVEHQGNWYY IAPGRERMATGWIFDNEKWYFLSTNQKDLGKMIRFWATIDGYAYYFDESGAMAEKTVVQG KYKVNDQGQYLGEDGKPKQYGRSGFRTKPATVMDELMAKAKKEMETVTKPQIAGLGNPTF TARYGLNPNGVFDPGPQNPWAEKDNINMQQYDMKEEYTEDNTDSEDDGADEEAPYEEEKD EEEE >gi|333758476|gb|AFIH01000001.1| GENE 546 496100 - 497188 1016 362 aa, chain + ## HITS:1 COG:CAC2766 KEGG:ns NR:ns ## COG: CAC2766 COG1477 # Protein_GI_number: 15896021 # Func_class: H Coenzyme transport and metabolism # Function: Membrane-associated lipoprotein involved in thiamine biosynthesis # Organism: Clostridium acetobutylicum # 75 353 39 302 319 152 32.0 1e-36 MKSQFWKKERRHFGSLVFLVLLCLSLAACGKRERYQDQFTDVFNTASMVIGYEESEEAFQ KKAEQIHESLLHYHRLFDVYTDYPGLENLKKVNEEAGKAPVKVDPDIMELLKFGKEMDIR TNGKVNIAYGAVLSLWHDKREEGIANPEKASLPEEKDLEEAAKHCNIEDLILDEEKMTVY FRDPGLRLDVGGIAKGWAVERVAELLEKEGAKSYLLNIGGNLRAIGKKGDGTKWICPVQN PFYTDGEEDNPYAVSGEIEEVSLVTSGDYERYFTVDGVRYAHIVDPETRYPANRHRSVTI LTKDSALADTLSTALFILSVEDGKSLLEKIRKEDSLEIDAMWVEPDHSMAYTEHFLNRID AE >gi|333758476|gb|AFIH01000001.1| GENE 547 497212 - 497328 120 38 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQVFILVAGKLLIGFLTLIFVINISESRTDSCRKISFM >gi|333758476|gb|AFIH01000001.1| GENE 548 497325 - 497450 129 41 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIGKDVEWVKREVAEQGYASIKEVYLGEYRNGSLHCYPERL >gi|333758476|gb|AFIH01000001.1| GENE 549 497938 - 498255 525 105 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227871805|ref|ZP_03990208.1| ribosomal protein S10 [Oribacterium sinus F0268] # 1 105 1 105 105 206 99 3e-51 MASQVMRITLKAYEHSLVDESAAKIVENCKKTGSQVSGPVPLPTKKEVVTILRAVHKYKD SREQFEQRTHKRLIDVINPNQKTMDSLQRLEMPAGVFVDIKMKNK >gi|333758476|gb|AFIH01000001.1| GENE 550 498300 - 498929 828 209 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|238916265|ref|YP_002929782.1| large subunit ribosomal protein L3 [Eubacterium eligens ATCC 27750] # 1 209 1 209 211 323 76 2e-86 MKKAILATKVGMTQVWDENGVLIPVTVLQAGPCVVTQVKTLENDGYKAVQVGFLEKREKL VNKPLKGQFDKAGVSCKRFLREFRFENAEEYKVKDEIKADIFAEGDKVDVSATSKGKGFA SAIKKYGQHRGPMTHGSKFHRHQGSNGTSATPSRVLPGKAMPSHMGAVKVTTQNLTVVRV DAEKGLILVKGAVPGPKKALVTIKEAVKS >gi|333758476|gb|AFIH01000001.1| GENE 551 498955 - 499575 978 206 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227871801|ref|ZP_03990205.1| ribosomal protein L4 [Oribacterium sinus F0268] # 1 206 1 206 206 381 93 1e-104 MANVSVFNMQGKEVGKMDLNDAIFAAPVHEHLLHLAVVAQLANKRQGTQKALTRSEVSGG GRKPWRQKGTGHARQGSIRAPQWKGGGVVFAPTPRDYTTTMNKKEKRAALKAALSNAVAE NKLIVVDEIRFDEIKTKNFQNMLNALHVQKAFVLLDENDKNTVLSARNIQDVKTAQVNEL NVYDVLRYGTVLATKAALLKVEEVYA >gi|333758476|gb|AFIH01000001.1| GENE 552 499575 - 499874 440 99 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227871800|ref|ZP_03990204.1| ribosomal protein L23 [Oribacterium sinus F0268] # 1 99 1 99 99 174 88 2e-41 MASLQYFDVILRPVVTEKSMADMAEKKYTFLVHPEANKVQIKEAVEKMFEGAKVKAVNTM NLEGKKKRRGMVIGKTAKRKKAIVTLAADSKEIEIFSAL >gi|333758476|gb|AFIH01000001.1| GENE 553 499941 - 500786 1415 281 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227871799|ref|ZP_03990203.1| ribosomal protein L2 [Oribacterium sinus F0268] # 1 281 1 281 281 549 95 1e-154 MGIKTYKAYTPSRRNMTGSDFSEITKKTPEKSLLAKNKKTAGRNNQGKITVRHHGGGNRQ KYRIIDFKRNAKDGVVATVIGIEYDPNRSANIALLSYEDGSKAYILAPNGLTDGMKVMSG ENAEARVGNCLPLSIIPVGSEIHAIELKPGKGAQLVRSAGNAAQLMAREGKYATLRLPSG EMRMVPIECRATIGVVGNGDHNLINLGKAGRKRHMGIRPTVRGSVMNPNDHPHGGGEGRA PIGRPGPCTPWGKPALGLKTRNKKKLSNKLIVRRRDGRAIK >gi|333758476|gb|AFIH01000001.1| GENE 554 500806 - 501084 486 92 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227871798|ref|ZP_03990202.1| ribosomal protein S19 [Oribacterium sinus F0268] # 1 92 1 92 92 191 100 9e-47 MARSIKKGPFADQSLLKAVDALNAQNQKTVVKTWSRRSTIFPSFVGHTIAVHDGRKHVPV YVTEDMVGHKLGEFVATRTYRGHHGNGDERRG >gi|333758476|gb|AFIH01000001.1| GENE 555 501114 - 501503 629 129 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227871797|ref|ZP_03990201.1| ribosomal protein L22 [Oribacterium sinus F0268] # 1 129 1 129 129 246 96 2e-63 MSKGHRSQIKRERNANSDKRPSAKLSYARVSVQKACFVLDAIRGKGLEEALGIVTYNPRY ASTLVKKLLESAAANAENNNNMNRDTLYVAECFANSAPTLKRIHPRAQGRAYRIFKRSSH ITVILDERK >gi|333758476|gb|AFIH01000001.1| GENE 556 501517 - 502179 1083 220 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227871796|ref|ZP_03990200.1| ribosomal protein S3 [Oribacterium sinus F0268] # 1 220 1 220 220 421 95 1e-116 MGQKVNPHGMRVGIIKDWNSKWYADKKNFADTLIEDHKIREFLKKKLYSANVSKIEIERA AEDKVRVTIYTAKPGYVIGKGGAEIEKLKKEVQKFTDKNIFIDIKEIKRPDRDAQLVAES IALSLENRVSFRRALKQAMSRTMKAGALGIKASVGGRLGGADIARREFYSEGTIPLQTLR ADIDYGFAEADTTYGKLGVKVWIYKGEVLPAKKNKEGSEK >gi|333758476|gb|AFIH01000001.1| GENE 557 502182 - 502610 732 142 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227871795|ref|ZP_03990199.1| ribosomal protein L16 [Oribacterium sinus F0268] # 1 142 1 142 142 286 95 3e-75 MLMPKRTKFRKQMRGRMTGKATRGNTISHGEFGIVSMEPCWIRSNQIEAARVALTRYIKR GGKVWIDIFPDKPVSAKPLGVRMGSGKGATDYWVAVIKPGRVLFEIAGVPEEVAREALRL ASHKLPCNCKIVAKADLEGGDN >gi|333758476|gb|AFIH01000001.1| GENE 558 502610 - 502813 317 67 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227871794|ref|ZP_03990198.1| ribosomal protein L29 [Oribacterium sinus F0268] # 1 67 1 67 67 126 98 4e-27 MKKNTYLEELKAKSAEQLNEELVSAKKELFNLRFQNATNQLDNTARITEVRKNIARIQTV ITEKAKA >gi|333758476|gb|AFIH01000001.1| GENE 559 502831 - 503085 414 84 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227871793|ref|ZP_03990197.1| ribosomal protein S17 [Oribacterium sinus F0268] # 1 84 1 84 84 164 97 2e-38 MERNLRKTRTGKVVSAKMDKTIVIAIEDHVKHPLIGKIVQRTVKIYAHDENNEAGEGDTV KVMATRPLSKTKRWRLVSIIEKAK >gi|333758476|gb|AFIH01000001.1| GENE 560 503110 - 503478 596 122 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227871792|ref|ZP_03990196.1| ribosomal protein L14 [Oribacterium sinus F0268] # 1 122 1 122 122 234 98 2e-59 MIQQETRLRVADNTGARELLCIRVMGGSTRRYAAIGDTIVASVKDAIPGGQVKKGDVVKA VVVRTVDETRRKDGSYIRFDENAAVILKEDNTPKGTRIFGPVARELRDHGYMKIVSLAPE VL >gi|333758476|gb|AFIH01000001.1| GENE 561 503492 - 503797 478 101 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227871791|ref|ZP_03990195.1| ribosomal protein L24 [Oribacterium sinus F0268] # 1 101 1 101 101 188 91 8e-46 MRRIKKDDMVRIITGKDKGKEGKVLSFDPKTNKVVVEGCNMVTKHQKPSQANPQGGLLKK EAALDASNVMLVVDGQATRVGFKVEDGKKVRVAKKTGKVID >gi|333758476|gb|AFIH01000001.1| GENE 562 503817 - 504356 899 179 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227871790|ref|ZP_03990194.1| ribosomal protein L5 [Oribacterium sinus F0268] # 1 179 1 179 179 350 99 1e-94 MARLKDIYNSEIKEAMQKKFNYKNVNEIPKLEKIVINMGVGEAKENSKVLDSAVRDLEII TGQHAVTTKARKSVANFKIREGQAIGCKVTLRGEKMYEFADRLINLALPRVRDFRGVNPN AFDGRGNYALGIKEQIIFPEIEFDKVDKVRGMDIIFVTTAKTDEESRELLTLFNMPFAK >gi|333758476|gb|AFIH01000001.1| GENE 563 504369 - 504554 330 61 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227871789|ref|ZP_03990193.1| ribosomal protein S14 [Oribacterium sinus F0268] # 1 61 1 61 61 131 100 1e-28 MAKLSMKLKQQRPAKFSTREYTRCKICGRPHSVLRKYGICRVCFRELAYKGEIPGVRKAS W >gi|333758476|gb|AFIH01000001.1| GENE 564 504665 - 505066 530 133 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|238916279|ref|YP_002929796.1| small subunit ribosomal protein S8 [Eubacterium eligens ATCC 27750] # 3 133 1 131 131 208 78 7e-52 MSMSDPIADMLTRIRNANTAKHDSVLIPASKMKKAIAEILLKEGYIASCEIVENGKFQDI KIGLKYGATKNDKIISGIRKISKPGLRVYAGKENMPRVLGGLGTAIISTNQGVITDKEAR QKGVGGEVLAFVW >gi|333758476|gb|AFIH01000001.1| GENE 565 505128 - 505667 897 179 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227871786|ref|ZP_03990191.1| ribosomal protein L6 [Oribacterium sinus F0268] # 1 179 1 179 179 350 97 2e-94 MSRIGKLPVAIPAGVTVEIKDNVVKVKGPKGTLERTFAKEITIKEEDGHLVVTRPNDNKK EKSLHGLTRALLFNMVEGVSNGYEKKLEINGVGYRAAKQGKTLTLTLGYSHPVTMEDPEG LETVLEGTNTIFVRGIDKEKVGQYAAEIRGKRAPEPYKGKGIKYSTEVIRRKVGKTGKK >gi|333758476|gb|AFIH01000001.1| GENE 566 505683 - 506045 584 120 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227871785|ref|ZP_03990190.1| ribosomal protein L18 [Oribacterium sinus F0268] # 1 120 1 120 120 229 95 4e-58 MVSKKNKAELRQKKHARIRNRLSGTPERPRLAVFRSNKHMYAQLIDDVAGNTLCAASTLD KNANLQFTDNIEAAQFVGKAIAEKAIAKGIKEVVFDRAGFLYHGKVQALADAAREAGLVF >gi|333758476|gb|AFIH01000001.1| GENE 567 506067 - 506576 835 169 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227871784|ref|ZP_03990189.1| ribosomal protein S5 [Oribacterium sinus F0268] # 1 169 1 169 169 326 97 3e-87 MKREKIDANQLELNDSVVAIKRVAKTVKGGRTMRFSALVVVGDGNGHVGCGTGKATEVPE AIRKAKEAAVRNMVTVPVNEDKSVPHDYIGKFGASTVLLKKAPEGTGIIAGGPARMVCEL AGIKNIRTKSLGSNNKTNVVYATLQGLTSMKTPEQFAILRGKTVAEITG >gi|333758476|gb|AFIH01000001.1| GENE 568 506589 - 506771 282 60 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227871783|ref|ZP_03990188.1| ribosomal protein L30 [Oribacterium sinus F0268] # 1 60 1 60 60 113 95 4e-23 MADKLRITLVKSPIGAIPKQKATVQALGLKKIRQSVELPNNGATKGMIQKVNHLVKVEEI >gi|333758476|gb|AFIH01000001.1| GENE 569 506783 - 507226 730 147 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227871782|ref|ZP_03990187.1| ribosomal protein L15 [Oribacterium sinus F0268] # 1 147 1 147 147 285 95 5e-75 MELAKLSPAEGSKHSQNFRRGRGHGSGNGKTAGKGHKGQKARSGAPRLGFEGGQMPLFRR IPKRGFTDPNSKVITGINVSVLEDRYNAGDEVTLESLLEKKIVRKVNDGVKILGNGELTK KLTVKVNAFSQSAKEKIEACGGTCEVI >gi|333758476|gb|AFIH01000001.1| GENE 570 507226 - 508566 778 446 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 [alpha proteobacterium BAL199] # 10 444 19 437 447 304 37 1e-80 MLQTIRNAFKVKDLRDRLIFVFLMLVVIRFGSNLPIPGVNPGYFGDLFKSMAGNDAFGWF NTMTGGSFEQLSIFALSITPYITSSIIIQLLTVAIPALEEMQKDGEEGRRKLTEYTRYVT IGLALLESTAMAVGFGGSGLLIGYAEGSVLRKMAGIVICVVAMTAGSALLMWIGERMTDK GVGNGISLVLLFNILSSIPQDFITLYERFIMNHNVATMVVAGIIIAAAIFCMVCFTVVLQ DAERRIPVQYSRRVQGRGMVGGQQSQIPLKVNTANVMPVIFASSLMTMPVVLGQILHVNN GTIIGKIIMALNSGSWMNPNAPIYSLGLVLYIALLYFFAYFYTSISFNPLEVANNMKKQG GFIPGIRPGKPTSDYLNGILRYIIFIGATGLAIVALVPIVISGVFNVSRISFSGTSLIII VGVVLETLKAIDSQMVIRNYKGFLDN >gi|333758476|gb|AFIH01000001.1| GENE 571 508657 - 509307 652 216 aa, chain + ## HITS:1 COG:CAC3112 KEGG:ns NR:ns ## COG: CAC3112 COG0563 # Protein_GI_number: 15896362 # Func_class: F Nucleotide transport and metabolism # Function: Adenylate kinase and related kinases # Organism: Clostridium acetobutylicum # 1 212 1 212 215 252 57.0 4e-67 MKIIMLGAPGAGKGSQASRIAMEYQLPHISTGDIFRANLKEETELGKKAKSFMDKGELVP DDITIAMLLERIHKEDCKNGYILDGFPRTIPQAEALKEALAKKNEKIDLALDVEATDELI IKRMAGRRTCPACGAIYHIVTLPPKEEGKCDRCGADLIQRKDDNEETVKNRLKIYHEITE PLISYYKKEGILEEIDGAEDLDKVFEKVKTIIRQRS >gi|333758476|gb|AFIH01000001.1| GENE 572 509326 - 510081 650 251 aa, chain + ## HITS:1 COG:BH0156 KEGG:ns NR:ns ## COG: BH0156 COG0024 # Protein_GI_number: 15612719 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionine aminopeptidase # Organism: Bacillus halodurans # 1 247 1 246 248 251 48.0 1e-66 MIEIKSKREIELMRDAGKVLAEVHEKVGEAVAPGKSTLELNDYAERLIRKAGCTPSFLHL YDFPAACCVSVNEELIHGIPTKDRILKEGDIVSFDIGTNYKGYHSDAARTWAVGEISSEA KRLVETAKEAFFRGIEQAVPENHLNDICGTIGDFVESRGYGVVRDYVGHGIGHEVHMDPE VPNYRMKRKGPKLQAGMTLAIEPMITEGNPEVRVLSNDWTVVPLDGRLTAHYENTILITD NGPEILSLMKG >gi|333758476|gb|AFIH01000001.1| GENE 573 510089 - 510307 270 72 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15900168|ref|NP_344772.1| translation initiation factor IF-1 [Streptococcus pneumoniae TIGR4] # 1 72 1 72 72 108 68 1e-21 MSKSDVIEITGKVLEKLPNAMFQVELENGHQVLAHISGKLRMNYIRILPGDKVTIELSPY DLSKGRIIWRDK >gi|333758476|gb|AFIH01000001.1| GENE 574 510394 - 510507 191 37 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|160881761|ref|YP_001560729.1| ribosomal protein L36 [Clostridium phytofermentans ISDg] # 1 37 1 37 37 78 91 1e-12 MKVRSSVKPICEKCKVIKRKGSIRIICENPKHKQRQG >gi|333758476|gb|AFIH01000001.1| GENE 575 510527 - 510895 591 122 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227871777|ref|ZP_03990182.1| ribosomal protein S13 [Oribacterium sinus F0268] # 1 122 1 122 122 232 95 6e-59 MARIAGVDLPREKRIEIGLTYIYGIGRSSADKILQATGVNPDTRVKDLTDDEVKNLANYI ADHQMVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPRKTVANK KK >gi|333758476|gb|AFIH01000001.1| GENE 576 510975 - 511370 658 131 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227871776|ref|ZP_03990181.1| ribosomal protein S11 [Oribacterium sinus F0268] # 1 131 1 131 131 258 99 1e-66 MAKSTGKRVTKKRVKKNVERGQAHIQSSFNNTIVTLTDAQGNALSWASAGGLGFRGSRKS TPYAAQMAAETAVKAALVHGLKYVDVMVKGPGSGREAAIRALQANGLEVTSIKDVTPVPH NGCRPPKRRRV >gi|333758476|gb|AFIH01000001.1| GENE 577 511576 - 512169 938 197 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227871775|ref|ZP_03990180.1| ribosomal protein S4 [Oribacterium sinus F0268] # 1 197 1 197 197 365 93 4e-99 MAVDKVPVLKRCRSLGLDPVFLGVDKKSNRQARNARRKMSEYGLQLREKQKAKFIYGVLE KPFRNYYAKAERLPGQTGENLMVLLESRLDNVIFRMGMARTRREARQVVGHRHVTVNGKI VNIPSYLVSAGDVVAIKESMKTAQRYKDITEVTGGRMVPAWLEVDEEKLSATIKNLPHRE EIDVPVNEMLIVELYSK >gi|333758476|gb|AFIH01000001.1| GENE 578 512194 - 513138 1004 314 aa, chain + ## HITS:1 COG:BH0162 KEGG:ns NR:ns ## COG: BH0162 COG0202 # Protein_GI_number: 15612725 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, alpha subunit/40 kD subunit # Organism: Bacillus halodurans # 1 313 1 314 314 310 55.0 3e-84 MFDFEKPNIEILEISEDKRFGRFVCEPLERGYGATLGNSLRRMMLSSLPGAAVSAIKIQG LSGDTISGVKESYSEVLTNLKSLVVSLPDGVEQLEAHLEVSEKEEAKASDFKAESEFVLI NPDLHIATLEKGAKLSIGVVITKGQGYVGTVKEKASKYPKGYTLLDALYTPVDRVNMTVE NTRVGNMTDYDKLTLDVYTDGGMLPQDAVSAAAKMLFQHLDLFVNLSSEGAETQLMVEKE EDDKGKVLEMNIDELELSVRSYNCLKRAGINTVSELTSKTPEDMMKVRNLGRKSLEEVLA KLRELNLGLSTPEE >gi|333758476|gb|AFIH01000001.1| GENE 579 513197 - 513733 760 178 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227871773|ref|ZP_03990178.1| possible ribosomal protein L17 [Oribacterium sinus F0268] # 1 178 1 178 178 297 86 2e-78 MAMYRKLGKATAPRKAMLRSLTTDVLRYGKVFTTEARAKEVRKQVEKLIALAVREKDNYE MVAVKAKVAKKDADGKRVKEVVDGKKVTVYDEVEKSIQKDKPSRLQARRQILAATYVPTE RPAAVAGRKKNTKKVDIAKKLFDEIAPKYVDRKGGYTRIVKVGLRKGDAAMEVLLELV >gi|333758476|gb|AFIH01000001.1| GENE 580 513933 - 515213 1232 426 aa, chain + ## HITS:1 COG:SP0117 KEGG:ns NR:ns ## COG: SP0117 COG5263 # Protein_GI_number: 15900059 # Func_class: R General function prediction only # Function: FOG: Glucan-binding domain (YG repeat) # Organism: Streptococcus pneumoniae TIGR4 # 269 425 600 744 744 105 35.0 2e-22 MLRKKLAFILSIFMILLFAVPAMAKDSISNILTVSIKVDQNLRNLEVGSSLGNISESDFT TGSTDRYHVESVDWVNSGNADNLQVGSEPKVKLYLVADSKEKNNGDTLNYQFFGSYTANN VRVTNGTFVSARRISSTELEVIIQLKPITGTYDSPDNLTWSNNSLGRASWTAENNTSGYY EVKLFRDGKQLVKITTDALSLNLYPWMTEEGPYTFSVKTIPYTEVQKKAGKSSDEVESDI LSISETNRSNGQGKYSETQIFGQHKAENNTTIPATIGWSQINGKWYFRYPNGQPAINTWI DWNGRWYHFNGQGEMETGWFKNAYGNWFYLDKVNGDAKTGWQLIDNVWYYFLPDSGDRQC MMLSNGIFKIGQESYYFDAAGAMRTGWVALTINGKQVYYYFHNNGSMAKNTMIDSFRINE QGQWVQ >gi|333758476|gb|AFIH01000001.1| GENE 581 515268 - 516014 741 248 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227873645|ref|ZP_03991882.1| ## NR: gi|227873645|ref|ZP_03991882.1| conserved hypothetical protein [Oribacterium sinus F0268] conserved hypothetical protein [Oribacterium sinus F0268] # 1 248 13 260 260 375 69.0 1e-102 MNDFREKKNARLIMAIHGIQNEGGANWEERLIDALIHHAEFYVPMRTVGEGEEKKPVFAV VEDKDKNHFYALFTSQEKVKKWPNSTEGSAVLSFHQLALMALDDPRISGFVIDMNSENFI LWRKFIANCIHVEQAELMGEVPVRPGEDLEFTEPLGDAKELEEALTEYMRDDLNVMAAYL LGAKQDGKSFNLCIVSHKGSIQPSFANITTVGNDFSGGIPFAVMSNRSKTAEDAIKDRMP FYRRPFVV >gi|333758476|gb|AFIH01000001.1| GENE 582 516169 - 516399 181 76 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRMNLRTFEIFVTSILVFSLFGILSILPEIRYISFALVLTSLFFLYEIEKEWQRRRKKAV FYKKMERIIARRLSGE >gi|333758476|gb|AFIH01000001.1| GENE 583 516351 - 516611 105 86 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLLIRILASIAELVKSPAPPVLSLQNKHNTVKKKLPFGGQFFNAYFALCVLERLIGQNVL MVNPGVKNKFLYSPLSLLAIILSIFL >gi|333758476|gb|AFIH01000001.1| GENE 584 516532 - 516702 205 56 aa, chain - ## HITS:1 COG:no KEGG:TTE0932 NR:ns ## KEGG: TTE0932 # Name: not_defined # Def: ferredoxin 3 # Organism: T.tengcongensis # Pathway: not_defined # 1 56 19 74 74 63 67.0 4e-09 MAHVVSDECVSCGACAAVCPVEAISEGPTKYVVDPDTCIDCGACEEPCPTGAIAAE >gi|333758476|gb|AFIH01000001.1| GENE 585 516855 - 518585 1709 576 aa, chain + ## HITS:1 COG:CAC2714 KEGG:ns NR:ns ## COG: CAC2714 COG0488 # Protein_GI_number: 15895971 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Clostridium acetobutylicum # 87 574 167 643 643 381 45.0 1e-105 MILNVSMLSKAYVGKTVLKDVSFHLEDKEKAAIVGINGSGKTTLLRCILGIEEADEGSIA FSKEKKMDYLAQQHADIEAENEDYDTLSGGQKTRKRLEEILQEKPDLLILDEPTNHLDIG SIQWLEKVLKRYDGAVLLVSHDRYFLDKIVTKVIDLERGKVRMYQGNYSAYAEKKRQIRE AEWKAFQNQQAEIKHQEAVIEKLKQFNREKSIKRAESREKMLSKVERLEKPEELENEMKL LFSPRESSGNDVLMAKELGKSYDGRRLFSHGTFSLQRGEHVALIGDNGTGKTTLLKILNG LIRADEGEFRLGSKVKIAYYDQEHAVLHMEKTLFEEIQDTYPDMNNTKVRNVLAAFLFTG DDVYKRIQDLSGGEQGRVSLAKLMLSDANFLILDEPTNHLDIQGKEVLEEAIRNYEGTVL YVSHDRYFINKTATRIIELFSNRFDNYIGNYDYYIEKKEDVRAYGDSLQKDKMPLEAIDP EEAQRLEEKESKRLDWENQKELSAKRRKWQNALQKAEEKIAKLEERKEELTASMEEVGSD VGRLMEIHREQEAIDKELEEQYAIWEESSLELENLG >gi|333758476|gb|AFIH01000001.1| GENE 586 518781 - 520943 194 720 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|237669903|ref|ZP_04529877.1| SSU ribosomal protein S1P [Brachybacterium faecium DSM 4810] # 635 717 196 275 493 79 48 7e-13 MNIIQKIAEDLSLKKMQVEAAVQLLDEGNTVPFIARYRKEATHGLNDEELRSLEERLQYL RNLEERRESILNSIAEQGKLTDELKAQIEAADTAVRLEDLYLPYKKKRRTRGMIAREKGL EGLAEAILTPGVNPVKEAENYLSEEKEVHSVEEALNYAKDILAEEFSENASYREWIRNKT MELGSISSSKKDAEENPDAKTYEMYFDYEEKVKTIPGYRTLAINRGEKEKVLSVKLNFPQ EEIIAYLEKQAGKDLQGENLRLLQEAVLDSFKRLISPSIETEIRNILTEKAEDGAIAIFA DNLKQLLMQAPIVGKVVLGWDPGFRTGCKIAVVDPTGKVLDTTVIYPTPPKNQVKEAMAV IHKLIEKHKVDIIALGNGTASRESEKVISDYIHETKSKVQYVIVNEAGASVYSASKLATE EFPNFDTGERSSTSMARRLQDPLAELVKIEPKAIGVGQYQHDMNQNKLEEQLNNTVEDCV NHVGVDLNTASAALLSYISGINKTLAKNIVVYREENGAFKSRKELLKVAKLGPKAFEQSA GFLRIREGKEVLDRTSVHPESYQKTKELLALLNLNEKDIAEGKGKDIAKMISALPGGMKA LEEKLAIGSFTLKDIVEALAKPGRDPREDVPAPILRSDVLELSDLKEGMILEGTVRNVLD FGAFVDIGVHQDGLVHISALSKKFVKHPLDVVKLGDIVKVKILSVDTERKKISLSMKDAE >gi|333758476|gb|AFIH01000001.1| GENE 587 521209 - 522117 445 302 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227873752|ref|ZP_03991982.1| ## NR: gi|227873752|ref|ZP_03991982.1| hypothetical protein HMPREF6123_1921 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_1921 [Oribacterium sinus F0268] # 34 274 5 246 259 176 40.0 2e-42 MFCTVKKRKRKDFCRFLIKGIGAVLFLVILMFVRSGNFLSTVEAQDGSFGCGNSVTVEIS FSLEVLGRNVPESNFRVYLERDVESPNNPLPEPFYLDIHKGAGREKFYFHKMKFSREGVY RYRIKQEKQNQEGFSYDDTEYNLEIEVLRANIDRYGNVVHPYLYAVVTGKKTGEEEKVTE LSFVNSYQKEEGGKVNFLPQKPAQTDARKGVLNRTAKRGGGDEEKPLGAFLNKSAMYLRI ARRKLKGEGSRMALYALSTALATGNVILWLYRVRYAGGKDTGTKDSRKKKNKAFSASWFR TS >gi|333758476|gb|AFIH01000001.1| GENE 588 522354 - 523169 728 271 aa, chain + ## HITS:1 COG:slr0400 KEGG:ns NR:ns ## COG: slr0400 COG0061 # Protein_GI_number: 16331124 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar kinase # Organism: Synechocystis # 52 268 73 289 305 155 38.0 7e-38 MNLALIVNQSKEDAESFQKVIVERLEDLGVHPQLFLNKDFQRNDFNEIDCIITLGGDGTI LHTAGVLRGMRVPILGINAGHLGYLTEIRKRREIDEALKRLLAGDYVEDRRSMLLGRVIR GGREIFSKLALNELLISRVRGVSIHHFQVFCDGMEMVHYSSDGIIISTPTGSTAYNLSAG GPIISPEAKVYIMNPICAHSLNARAVVLDDRRVLEIVMEKGDQVLSFDGEEPFELLSGDK VIIEKAEEETVLVKFSRESFLHTLREKMSLV >gi|333758476|gb|AFIH01000001.1| GENE 589 523191 - 524849 1664 552 aa, chain + ## HITS:1 COG:BH2776 KEGG:ns NR:ns ## COG: BH2776 COG0497 # Protein_GI_number: 15615339 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Bacillus halodurans # 1 544 1 554 565 295 35.0 1e-79 MLDRLMVKDLALIEKSVVEFGPGLNILTGETGAGKSILLGSIQLALGQKANKDMIRHGSE QALIELSFSLGEEKEAELKELEEDLEIEEGSLIIRRKISEKKSENRVNDLSVTLAKLREI SGELLDLHGQHEHHSLLKEGAHLAILDSFMTRRGGRILSEVKEAYENYREKKKKVEAYSL PEEERKRELDFLQFELEELSSANLKPGEEEQLSKDYAVYENRDRLKSLLLRVQEELADRD FHGPVKNLEEAVTFDESLKNVLDTAYELEAVGEDCLRAVEHYLDHSEMDEEKFFLLGERL DTIRSLMMKYGGTEEKALEALSKKEERLRFLTDYEKEKALMEEALARSEEELREKAEKLS LERQKTAKELEERIQQEMQELGFLDTRFTFRFEKKREISEKGLDEVESYVSLNPGEPLRP LREVGSGGELSRIMLSIKTVLADTDAVPTLIFDEIDTGISGRTAEKVGEKLEKIAKNHQV ILITHLPQIAAKADRHFLIEKNVQEGKTKTEIHALNEEASVKELARLLGGEELTEAALQN ARSLKAKAKEKK >gi|333758476|gb|AFIH01000001.1| GENE 590 524894 - 526342 1366 482 aa, chain + ## HITS:1 COG:CAC2239 KEGG:ns NR:ns ## COG: CAC2239 COG0297 # Protein_GI_number: 15895507 # Func_class: G Carbohydrate transport and metabolism # Function: Glycogen synthase # Organism: Clostridium acetobutylicum # 4 475 3 473 477 461 48.0 1e-129 MKNILFLASEAVPFIKTGGLADVVGSLPRSIDKAYFDARIMIPKYMCMREEDRYNLEYVT HFYMDYLGQSRYVGVLKKEVDGILYYFIDNEYYFSGNRPYGNWYWDLEKFCFFSYAALSA LPLLDFHPDVIHCHDWQTGLVPVLLKDRFAGGEFFRSIRSVFTIHNLRFQGTWDRKTIQR FTELSDYYFTPDKLEYKKDGNLLKGGLVYADAITTVSKTYAKEIQTAFYGEGLEGLLQAR DRDLRGIVNGIDYDIWNPKRDPYLPYPYDKVSVHKEKAKNKTALQESLGLSVSEDTMLIS IISRLTDQKGLDLIERVFDELCQDAVQFVILGTGEDHYENLFRYFAWKYPDRVSAQIYYS EEISHRIYAGSDAFLMPSLFEPCGLSQLISLRYGTIPIVRETGGLRDTVEPYNEYEKKGT GFSFANYNAHEMMASIRYAERIYYDDKRSWRGIINRAMKKDFSWKSSALQYQELYDWLVE RN >gi|333758476|gb|AFIH01000001.1| GENE 591 526356 - 526820 636 154 aa, chain + ## HITS:1 COG:L26878 KEGG:ns NR:ns ## COG: L26878 COG1963 # Protein_GI_number: 15672981 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Lactococcus lactis # 3 145 6 146 147 134 49.0 8e-32 MEQLLSNYPLMSAVLAWFVAQVIKTAIDAYFNKGINWERMTGSGGMPSSHSSTVVSLAIA TGISYGVDSTLFAIALIFAIVVMYDATGVRRETGKQAVILNRLLLDNPFSWTGKEFEKKL KEYVGHSPFQVLMGAILGILIAVIMAYVYGLIMI >gi|333758476|gb|AFIH01000001.1| GENE 592 526916 - 527932 1005 338 aa, chain + ## HITS:1 COG:no KEGG:Closa_3219 NR:ns ## KEGG: Closa_3219 # Name: not_defined # Def: PpiC-type peptidyl-prolyl cis-trans isomerase # Organism: C.saccharolyticum # Pathway: not_defined # 23 333 11 320 323 205 35.0 3e-51 MKECFGLGDKGGFFLKQKRSFCVILTLLFSFILVSCKGIAISGKTENVPGYTKQQAMLVL GSERNRYQNILGKEIWNLPISGQIQKTYGAYFIEKNKEFLQDIRTLNLLAEEKGILPNST EMDSIRKAATKFYGALTPEDKSFFGDCTEKDVVDMYVAYFTAEKTAESLLSSVDTELSAA ESKVISIEQIVLSNEDTAKDLLEKVRAQGANFSYYARQYSEDPEILKQLSFGEKEDQYYE VAFSLQNNEISDIISENGKYYILHCINSYDEEATRDRKERLENSIRVLRFNESYDAYQKE HIVRFREPFWKEIDLNAGEGSTADFFFSVYQEYVKVEQ >gi|333758476|gb|AFIH01000001.1| GENE 593 527950 - 528804 705 284 aa, chain - ## HITS:1 COG:SPy1698 KEGG:ns NR:ns ## COG: SPy1698 COG1307 # Protein_GI_number: 15675555 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 283 1 277 280 119 31.0 7e-27 MSYQIIADSCGDFTEEMKRNPVFKTVPLTLEIGSYSILDDEHFDQLDFIQRVNASPVGPK TACPSPEAFQKAIEESDADEVYIVTISDSLSGTFQAAKIGQSLYEENGKKGEKKIHIFNS LSASAGECKLCLDIQELKEAGKPFEEVVETVEKACSDINTLFVLESLDTLRKNGRLTGIK SFLASALNIKPIMGAVNGTIIQLGQQRGIQKALRKMVELAVERAGGPEATKRKRLVITHV NAPERAEQVKADFEKLASFKEIIITNAMGVATIYANDKGIVVAL >gi|333758476|gb|AFIH01000001.1| GENE 594 528982 - 530697 1529 571 aa, chain + ## HITS:1 COG:FN1824 KEGG:ns NR:ns ## COG: FN1824 COG1227 # Protein_GI_number: 19705129 # Func_class: C Energy production and conversion # Function: Inorganic pyrophosphatase/exopolyphosphatase # Organism: Fusobacterium nucleatum # 15 571 3 538 538 293 33.0 6e-79 MSIVEEQLSHNMERDILVTGHRNPDTDSICAAIAYARLKNIINHTNRYIPCRAGNPNTET SFVLDYFKEEKPRLLESVKTQVSDVAYRKTPGVPKNMSLKQAYQIMRDSHVVTLPAVTEE GILEGLITISDIAKSYMNVYDSAVISTAKTQFKNILETLEATRVTGDIERFCEKGKVVIA AANPEMMNYYIEPHDIVILGNRAESQLSALDNGADCIIICEGANVSPTIRDLAEHNGMII MVTSYDAYTAARLINQSIPIDFFMTKEGILSFGEDDYIDDIKEVMANKRHRDFPVLNKEG KYLGMISRRNLLGAHGKQVIMVDHNELGQALEGMENAEILEIIDHHRLGTIQTLSPVSFR NQPLGCCSTIIYQIYKENGVSVDKKTAGLLMSAIISDTLLFRSPTCTPVDEKAARELAEI AGVDIEKYAMEMFATTSNLKKKTDKEIFYQDFKIFSAGKIRFGVSQITSLNEEELTALQK RLLHFAKTALEVENLGMVFVMLTNILEQDTVLLAVGSHSGELMHMAFSNEPEKLQFKLDK ENVEGYSLRIPGMVSRKKQLIPPLSLFAEQL >gi|333758476|gb|AFIH01000001.1| GENE 595 530880 - 531380 384 166 aa, chain + ## HITS:1 COG:MA3237 KEGG:ns NR:ns ## COG: MA3237 COG0703 # Protein_GI_number: 20092053 # Func_class: E Amino acid transport and metabolism # Function: Shikimate kinase # Organism: Methanosarcina acetivorans str.C2A # 1 148 7 155 175 135 45.0 5e-32 MNICLIGMPSSGKSVLGKMLAKRRKMTFLDLDTLIQKNTGKLLREIIAEEGREGFLRLEE ETGASLSVENTVIAPGGSICYGEKAMRHLQKISRVIFLDIPYEEMLKRIGDPVKRGVAIP EGFTLQDLYEERTALYRKYAEYTLEERGLSSGACVQKIMQYLDSAE >gi|333758476|gb|AFIH01000001.1| GENE 596 531469 - 533679 1187 736 aa, chain + ## HITS:1 COG:CAC0854 KEGG:ns NR:ns ## COG: CAC0854 COG0480 # Protein_GI_number: 15894141 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Clostridium acetobutylicum # 3 648 2 621 644 209 25.0 1e-53 MENIVLGFLAHVDRGKTSLSESLIFESGEIRKKGRVDHGDSVLDHDDLERKKGITIYAKS VYFTRENKRFFLLDTPGHREFSGEMERALKVLDYGVLLLDAREGIGKREEELRDLIERER LPLFIFVNKMDLFQGERESILEELKNHFPKQNVLDFTAFPSMAFRTEEGDGGAPNKETES DTFSKEERELMESIALSSLESTEEYLESGNVSPERVRSLIRKASLIPVFFGSALKQEGIG RFLEALTVLCINPKAEAGQEEKRGYIYKITRDEKGRRVAKARLFTGRLTLREEWLPGEKL TELRLEEGEKYTELSEVQAGSLFTAPVSERISPGVFPFEKEKEAQEGSLFQVELSIQEGD ILRYAEEIRDLSEEFPEWNLHIAEEGKKVRIRSLGALQRELLEDLFRKRTGQTAVFSPIE LIYGEGPRKEAYGRAVIESPGHYFALSLRLFPSEEGQKSSGNTEKAEEAKPGRIGFAENL NLRKDWMSRLETEWQVVEIKGPCLGGPYTHYGIEIIEADYRESSSYFTDLKAAVSEALFM AEKSAGLHLFQPCFSYSVAVKQTELGAVMQTIERAKGRQEELLQEGERVILKGRLSGENL PSLLGDLQRLQAEVGYRFSSFEKLTEEKEREILLERTGDSEQTDKLLFGADESAQDFFPE EEEASEGHSVPREAKTKEGKRKRKNRSLYSGYRTGGNLFKNLRPCTEQGKGSPALRTKAY FIQRKRREAEGGKGAV >gi|333758476|gb|AFIH01000001.1| GENE 597 533411 - 534133 425 240 aa, chain + ## HITS:1 COG:CAC3153 KEGG:ns NR:ns ## COG: CAC3153 COG3688 # Protein_GI_number: 15896401 # Func_class: R General function prediction only # Function: Predicted RNA-binding protein containing a PIN domain # Organism: Clostridium acetobutylicum # 99 237 2 139 172 72 33.0 5e-13 MERMNPHRTSSRRKRRLRKGIACQEKRRLRKEKEKEKTGAYIQDIELEEIFLRTFGPVRN RGKEALLSEQKLILSREKEEKQRAAREQYEKKSTVSKKKLLLVDGYNFMFAKDALKELAK EDLMAGREKVIQYLSEYAVFYDTEVYLIFDAYHVKGNPGTKQRFGKNLELIFTKEGESAD FTLTKMAKEFSEKGRAVSIVTSDQAVQVQAFSGKGVSRYSSREFYGILEEMRRQISEMEL >gi|333758476|gb|AFIH01000001.1| GENE 598 534308 - 535387 1420 359 aa, chain + ## HITS:1 COG:no KEGG:PPSC2_c0783 NR:ns ## KEGG: PPSC2_c0783 # Name: not_defined # Def: membrane associated protein # Organism: P.polymyxa_SC2 # Pathway: not_defined # 65 357 39 329 330 128 28.0 3e-28 MKKISLGLTVLVLICSLSACKELKDAQNAFQNEKGNTDNGKNEALNNLMGALQGDKDSYE DLPPASDLEAYNNYVDLSNFMTGDVEESLDRYFNGVAASGDFSPIEGGSYITTTFSNHDY EFLDEVESQADLGTSYKEMDEHALTMIPTLRALMEVLDEAGNYGNQKGYLDDNYAKGQEI HSRFVPAVNAYDDERLPYLNSLRAILQEQQARDLERFEKEGYTVRYQMLKLTMLKSEIMN AIYKQEDISDENVLSLDVTEIRPKYEEMAAVLAEFAVNFKDEAELEKEGFESYKSGQLSF FNNAITEFKVQTQALLSRVDEQRAYSEAEKLTLSTTEGSLERLIKCGSDVTSRYNDVIG >gi|333758476|gb|AFIH01000001.1| GENE 599 535629 - 535703 58 24 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPFSACKKTLFQGVFRSKLKFKEE >gi|333758476|gb|AFIH01000001.1| GENE 600 535713 - 537035 1411 440 aa, chain + ## HITS:1 COG:CAC0460 KEGG:ns NR:ns ## COG: CAC0460 COG1253 # Protein_GI_number: 15893751 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Clostridium acetobutylicum # 1 429 10 437 443 245 36.0 2e-64 MVGRVILLFILILVNGFFSCAEIAVLQVGETKIRKLSEEGNKKAKKLLKFTEEPSRFLST IQVAITLAGFLSSAFAAEGFAGLLDSLVMRLIPGLRVEVVHPISIVLITLILSYISIVFG ELVPKRLAQVHTEAIALNIASILVLVSVLATPLVFLLSASTNAILRLIGIDPDEDPSHIS EEDILMMVDEGLEKGTIESTENEFIQNVFEFNDLTVEDVCTHRTDVAMLYIEDTDKQWRR TIHEHRFACYPICGKDDDDIIGILNTKDYFRLNDLSRQNVMKNAVDRPFFISQNMKVSDL FETMKKERKYYGVVLDEYGGMTGIVTLHDLIEALVGDLQEEDEIPEPEPIEAVGEKEWII LGTADLEDVNEELKIHLDPEAADTFGGYIMGILGKVPEDGSTFHLDTDNLSIDVAEIKGH RIGKTVVRLIESEEKKEEED >gi|333758476|gb|AFIH01000001.1| GENE 601 537221 - 537586 456 121 aa, chain + ## HITS:1 COG:no KEGG:Shel_06720 NR:ns ## KEGG: Shel_06720 # Name: not_defined # Def: copper chaperone # Organism: S.heliotrinireducens # Pathway: not_defined # 15 115 17 124 131 71 38.0 1e-11 MGNYVIGALLAVIVFFAVRSMIKRGKSGCCGGGECSVQKVGVKDDNPQHYPFKAVLNVED MHCENCKNKVENALNSVDGVWGIVDLKKKTAEVRMKEAHSELEIREWVNKAGYGVSHVEM E >gi|333758476|gb|AFIH01000001.1| GENE 602 537592 - 538179 750 195 aa, chain + ## HITS:1 COG:lin2079 KEGG:ns NR:ns ## COG: lin2079 COG0494 # Protein_GI_number: 16801145 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Listeria innocua # 20 194 3 183 185 100 38.0 2e-21 MKEETKDFQKEDAEVKKPVTLLERTLKYKGSVLEVYDDYVDVGGHKTHWDFIHHMGAAAV LPVLANGKILMVKQFRHALNRYTLEIPAGKRDSEDEDFLLCAKRELQEETGFSSANWEFL LFVNTTVAFLDEKIGIYVAKDLQKGEQHFDVDEEIFLEEWELSDLQELIFAGKLTDGKTV AAIQSYAVKLQKEKQ >gi|333758476|gb|AFIH01000001.1| GENE 603 538316 - 538846 594 176 aa, chain + ## HITS:1 COG:TM1384 KEGG:ns NR:ns ## COG: TM1384 COG0503 # Protein_GI_number: 15644136 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Thermotoga maritima # 1 173 1 173 173 181 53.0 5e-46 MKKEHLADYVLSIPDFPEKGIIFRDITSLIQDPDGLKDSVDGLIHSLKGVDFDLVIGLES RGFIFGTAIAYEMHKGFVPVRKKGKLPRETVSVAYDLEYGKAEVEIHKDAIQKGMKVVIV DDLIATGGTLEAACKLVEKLGGEVVKISVVMELAGLEGRKKLAGYELESLICYEGK >gi|333758476|gb|AFIH01000001.1| GENE 604 538853 - 539356 582 167 aa, chain + ## HITS:1 COG:SP1517 KEGG:ns NR:ns ## COG: SP1517 COG0782 # Protein_GI_number: 15901363 # Func_class: K Transcription # Function: Transcription elongation factor # Organism: Streptococcus pneumoniae TIGR4 # 25 157 28 160 160 85 45.0 5e-17 MSEELTKEDVRKIEAEILKRKLELRPNLIEAVKEARAQGDLSENFEYYAAKREKNQNESR IRYLERILKFAKVISTESKADEVGMNDTVTLYFPEEEEEEVYRIVTSIRGQSLEGKISNI SPLGKAIIGKKLGQRVEVLPENGISYSVEIRKIEKTGEKEEESIRKF >gi|333758476|gb|AFIH01000001.1| GENE 605 539370 - 539831 404 153 aa, chain - ## HITS:1 COG:CAC3674 KEGG:ns NR:ns ## COG: CAC3674 COG0517 # Protein_GI_number: 15896906 # Func_class: R General function prediction only # Function: FOG: CBS domain # Organism: Clostridium acetobutylicum # 1 141 1 140 140 146 51.0 1e-35 MNILFFMTPKCDVAYVEEEDSLRNTLEKMEFHRYSSIPVLTKDGKFAGTLTEGDLLWEIK NQLKLDLRESEKVLVKDIPMRKHFEAVGINSSMESLVHKAVTQNFVPVVDDVGHFIGIVK RREIMNYLYRHADFHHLDAEALNTIPLDRVSLG >gi|333758476|gb|AFIH01000001.1| GENE 606 540219 - 540482 152 87 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPLYLDAAVWNVIQDLGDKLVHDEKELVETGKKEDLRESREVSVFEEEKLEGIAGSCFLW RGIKESLRGLRLCTKKTVARLPLGAAL >gi|333758476|gb|AFIH01000001.1| GENE 607 540542 - 542809 2313 755 aa, chain + ## HITS:1 COG:CAC2274 KEGG:ns NR:ns ## COG: CAC2274 COG0317 # Protein_GI_number: 15895542 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Guanosine polyphosphate pyrophosphohydrolases/synthetases # Organism: Clostridium acetobutylicum # 24 752 4 737 740 687 48.0 0 MLIDKKEDRALERPKDNTPPEELLEMLLKDVRSYHPSEDLSMITKAYEVAKEQHKEQKRK SGEPYIIHPLCVAIILADLEMDKETIAAGLLHDVVEDTGMTLEEVEKEFNPDVATLVDGV TKLTKLNLNSDKVEMQAENLRKMFVSMAKDIRVIIIKLADRLHNLRTLEYQSPEKRKEKA RESLEIYSPLADRLGISKIKIEMDDLSLKYLEPEVYYDLADKVHFKREAREDRINAIVEE VREHIEESGIEANIKGRIKHFFSIYKKMVNQNKTIDQIYDLFAIRIIVESVRDCYAVLGV IHKMYRPIPGRFKDYIAMPKPNMYQSLHTTVIGRDGVPFEIQIRTFEMHRTAEFGIAAHW KYKEQGGSDKKATETEMSKMKWLHEILEWQKDESDSKEFMNMVKSDLSLFNVNVYCFTPT GDVKNLPQGSTPIDFAYSIHSAVGNKMVGAKVNDKLVPIEYQLQNGDRVDIITSQNSRGP SRDWLKIVKSTQAKNKINQWFRHEQKDENLDRGKDLLDKYVKAKGISLPELTKPEYIEAV LRRYSYRDWDSVLAAVGRGGIKESQVIAKLLDAKHKAEDKNIDDKTVLKNIEDLTRKPEV IRKSKSGIIVKGIHDLAVRYARCCNPVPGDEVVGFVTRGRGITVHRTDCINIMDLSEDEK ARRIEVEWESNPGNGESYATELQIFTNNRVGLIVDISKVLSDDNIAIQGMNTHSSKNGKV TILLSFEVPNKEVLNGIIGKLRKIQGVYEIERGKG >gi|333758476|gb|AFIH01000001.1| GENE 608 542809 - 543450 468 213 aa, chain + ## HITS:1 COG:ML0493 KEGG:ns NR:ns ## COG: ML0493 COG0491 # Protein_GI_number: 15827169 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Mycobacterium leprae # 10 207 9 213 218 162 40.0 6e-40 MLQVKSMVVGIVGTNCYIVYDKKSRDAVIIDPGAEAERILSFLEEEELHPQAILLTHGHF DHILAVPALREKYKIPLYAAEEERKMLGNGQLNMSGRDPEDNVEIQDFTALRDGEELEFL GKKWKVLSTPGHTRGSICFFVEGEVPYLFSGDTLFCESYGRTDLYSGSEKEIIRSIREKL FTLPEETLVFPGHEESTTIRNEKSYNPVNFFRE >gi|333758476|gb|AFIH01000001.1| GENE 609 543733 - 545928 2130 731 aa, chain + ## HITS:1 COG:ECs5215 KEGG:ns NR:ns ## COG: ECs5215 COG1328 # Protein_GI_number: 15834469 # Func_class: F Nucleotide transport and metabolism # Function: Oxygen-sensitive ribonucleoside-triphosphate reductase # Organism: Escherichia coli O157:H7 # 7 731 1 706 712 433 36.0 1e-121 METEVLLMKNVIKRNGKEVKFDLSKIVHAIEKANKEVDPIYQLNAYQIQAAADSVVKKIQ TKSYAVNVEEIQDMVETAIMEMRGYEVAQKYVRYRYKREMARKANSTDEDILALIDQANE ELKQENSNKNPVINSTQRDYMAGEVSKDLTRRLLLPEDIVHAHEDGIIHFHDSDYYAQKE HNCDLINLEDMLQNGTVISETMIEKPHSFFTACNVTTQIVAQVASNQYGGQSFTLSHLAP FVDISRQKIREAVIEERKETGENMDEEIIAKIVNRRLKEEIKSGIQTIQYQLITLMTCNG QAPFVTMFMYLDEVEKGPVRDDLAMIIEEVLRQRMQGVKNEKGVWITPAFPKLIYVLDED NIHENSPYYYLTELSAKCTAKRMVPDYISAKKMKEYKGGDVYPCMGCRSFLTEDKEGLGE NGKHKYYGRFNQGVVTINLVDVACSSDGDMEKFWEILDERLELCHRALRLRHERLLGTVS DVAPILWQYGALARLKKGETIDKLLFNNYSTISLGYAGLYEMCVRMLGVSHTTEQGREFS LKVMEKLNDSCKKWREAENISYSVYGTPMESTTYKFAKALKKRFGEIPGVTDKNYITNSY HVHVSEKIDAFSKLSFEADFQKLSPGGAISYVEVPNLQNNIPAVLSLMKFIYENIMYAEL NTKSDYCCACGYDGEIQIIEDSYGKLQWRCPNCGNTNQDLLSVARRTCGYIGTQFWNQGR TQEIKDRVLHL >gi|333758476|gb|AFIH01000001.1| GENE 610 545951 - 546361 347 136 aa, chain + ## HITS:1 COG:FN0312 KEGG:ns NR:ns ## COG: FN0312 COG0602 # Protein_GI_number: 19703657 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Organic radical activating enzymes # Organism: Fusobacterium nucleatum # 1 111 1 113 168 137 54.0 8e-33 MHYAEIKYFDVANGPGIRVSLFVSGCPHACPGCFNEIAWNYAYGEKYTEEVEEKVLTALS KPEIQGLSLLGGEPLYPANLHALLPFLRKVKERLPKKDIWCYSGYTYEELLSRGGEEKKS STSSFLTLPSLWMVVL >gi|333758476|gb|AFIH01000001.1| GENE 611 546495 - 546926 537 143 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227871722|ref|ZP_03990131.1| ## NR: gi|227871722|ref|ZP_03990131.1| hypothetical protein HMPREF6123_0070 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_0070 [Oribacterium sinus F0268] # 1 143 1 144 144 110 63.0 5e-23 MKKIVLLVGIMGMLGMVACAKKTATETEKVTEASTEIKVGEDGEKQESEAKNSSEKATEA ESEAKGKEAGGKEKKDLTVISGTITDAAMYSVSVQGNDGKDYALNKTEKTDISGLSQGIE IGTKVEVTFDKDMNIISMVDPGK >gi|333758476|gb|AFIH01000001.1| GENE 612 546979 - 547683 762 234 aa, chain - ## HITS:1 COG:SMb20773 KEGG:ns NR:ns ## COG: SMb20773 COG1802 # Protein_GI_number: 16265213 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Sinorhizobium meliloti # 15 209 23 217 228 112 36.0 4e-25 MGSDFTINMNEYLPLRDLVFNTLRQAILKGELKPGERLMEIQLAEKLGVSRTPIREAIRK LELEGLVLMIPRRGAEVAKISHKSLQDVLEVRGALEELATDLACQRITDEQLTALRDAEN HFKAVVERGTEMEIAEADEAYHDIIYNATGNQRLIQMINNLREQMYRYRLEYIKDEAQRG TLISEHEKILEAIRIRDIIRAKALMKEHIDNQEMTVSKNLNEAEERSRQAAGKR >gi|333758476|gb|AFIH01000001.1| GENE 613 547739 - 548620 786 293 aa, chain - ## HITS:1 COG:BS_yabH KEGG:ns NR:ns ## COG: BS_yabH COG1947 # Protein_GI_number: 16077114 # Func_class: I Lipid transport and metabolism # Function: 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase # Organism: Bacillus subtilis # 7 276 6 270 289 223 43.0 4e-58 MDEIELKAHGKINLSLDVLSRREDGYHNVKMIMQSVTLHDTVFLKKEEERGIRLSCNLAS LPTDEGNLMVRAAKLMQEEFSIPGGIGMRLHKRLPVAAGMAGGSSDAAAVFLGLNQLFNL GLSVSELERRAVKLGADIPFCLHRGCFLSEGIGEKLQELPPLPPCHIILAKPAFSLSTKL IYENLHVDGIHKAEHPDVDRMIQELKKNNLEGICHLGGNILERVSLKLRPEIRELKNYFT EKGALLSLMSGSGPTVFAIFPKEEEAKCQAILEELKNTALNNLLESSCITAPC >gi|333758476|gb|AFIH01000001.1| GENE 614 548716 - 549531 693 271 aa, chain - ## HITS:1 COG:no KEGG:SSA_1740 NR:ns ## KEGG: SSA_1740 # Name: not_defined # Def: hypothetical protein # Organism: S.sanguinis # Pathway: not_defined # 9 271 19 260 261 201 47.0 2e-50 MFIRQFIFPKEKTEHLRFFDVLIITAILFGHFILLSTELFLESFTAGVSAILPAFSLSPV LLSENGSGILETVAEAVDSTTEGVAYSGNLQFQAMMLILAFLYLWIRNFDFKQIPFRFRL SVIPWFFIILAVMGLSADLLYLLFDNGYNYFTKEILMSLDFFELFRKIAVLSPIAILYAL LNAFYEEYFFLGLLGTVDQKYKWQTLLYSTLIRISFHTYQGLPSALIIGIVFGLIYYYFY HRRTKNLLPLVLVHSMADMFGSGFLYIFARF >gi|333758476|gb|AFIH01000001.1| GENE 615 549750 - 552272 2410 840 aa, chain - ## HITS:1 COG:BH0361 KEGG:ns NR:ns ## COG: BH0361 COG4932 # Protein_GI_number: 15612924 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted outer membrane protein # Organism: Bacillus halodurans # 376 512 1027 1171 1661 64 38.0 7e-10 MRAKRQILSLLLVLLLVWQGFSFANAETGSTQGTSIVGSGTGTEASAASSSTISGTGTAS SSTISGAGSASKKGKAIENALSIETLLINGKPLQDGGTLVSGQRLQLKAKIKVQGLSIEE GDYISVQLPKQLKSKNLSFDIPGDDGKILAKGTYNETTKEIRITFTKDAENYGGTDGEVF FVTEIDKAVVNSTTSAPFQLEINGKMVINYNIDYQIVTKENPKTFYKDRDYNLHKVVDKD GNTHYLIHYQVTLDTRNIEKVPGATSYENIVFTDTLQSGALSYFDVKNHFTDLNLNQADI DRYAPVLRKGIWRSGAYNQHGVWENAPDDSDANRGPFWSLRNRQNLDDFAPVVAGSPNYS ADRRSFTYSLGTLAPDDGYTLDYYVEISEAFKNNDIFYNSAKLTGDGIIPVERSRDFVVN EAGGFLNGKTFSLQIKKVGEEGEALQGAKFTLVNPKTNYTKTLVTDENGIAKLENVLKAD YVLTEVEAPEGYELDSTPRTISKTDFENSVANGSTVEVEAVNKKEEEQPKFRNLSVKKEW VLDPALATNKPEKVKVSVLKNGVKDENLTVELSAANGWKASFSNLPKQDANGQEIVYTVS EEEVAGFKAAISGSEENGFTISNYNGSRVVIPVTKIWQGKGPHPDHLNVQLFANGEKVAT YTLNKANGWQHSFDMPKLDANGKEIRYTVTEDSVAGYTATTQSNPATGYVNVFINKKNDV PPVKPGNGGGNGGGNPPKPSPNPSTPNEPGDPSGNGERPGEVLNANRPSVSSPESNPEGS VLGAGRNNAPEAKGTVLGSGRGQTKTGDSANMPVYFALFALTGLGFCIVVLNNYRKEKKN >gi|333758476|gb|AFIH01000001.1| GENE 616 552684 - 553871 1111 395 aa, chain + ## HITS:1 COG:PA3677 KEGG:ns NR:ns ## COG: PA3677 COG0845 # Protein_GI_number: 15598873 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Pseudomonas aeruginosa # 52 367 45 367 367 108 27.0 1e-23 MQKGLKAIAILIVLSVLSFFIVRRIMKPKEEVEGKALPTVTCISMEKGDIAVKEELLGEI SAKEQFRLLSKISGEVLEIDKENGSEVKKGERIALLDNQKQVDAAKYSLEQAKAQAQVTR DSRDRLATLKESGDISVQDFEAADAQAKAAEAQVKAAKLNYDTQVEFSEITAPSDGILQN SILVKGAFIPQGTQLATLIGAGSQQVLFSATEELVKNLSVGQSIMLEKGKESYPGTITEI SSVLLPETGLFPVKAEVENTDFPEGSKAKISLTKDSRSSVNILPLNVLYYENGEAFVYVF EGTDGNEGLLRKKKVELGLSGEESAEILSGLSEEDKVVSSWNNEMFDGAKVRLQDKKDES VKDSAKEKSAPEESLEENSTEEESAPEESAKVEKG >gi|333758476|gb|AFIH01000001.1| GENE 617 553878 - 556934 2806 1018 aa, chain + ## HITS:1 COG:BH3816 KEGG:ns NR:ns ## COG: BH3816 COG0841 # Protein_GI_number: 15616378 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Bacillus halodurans # 4 1009 1 1004 1093 432 29.0 1e-120 MIAITKLILRRPVSTFLAVLSLLFFGFIAFTTMKMELLPDMNFPYMIVSTVYPGASPEDI DELVSKPIEEEVSLLSDVEEVQSRSMENLSMVIVRYRYGTNMDRAYDKLKKKLDVLKGNL PDDAEDPDYIEFDINAQAGMVLAISDKTKANLYNYVKNNIEPEMEKLSSVASVSLSGGQA EYVRVELSEEKLAQYHLTMENIIQMIKASDFTYPAGSTHYGKQKLSLSVSEDYSTIEKLK NLPLLTGTGNTLYLRDLATVSESLEEKSSIGRYNGEDTIGLSLSKTQTESDIAMSRDVKE TIKDLEAQNPNLSIHIIQDNADSIKSSLSSVFQTMIMAVVISMAIIFFFFGDVKASLIVG SSIPIAILGAIVFMYAMGYSMNMLTLSALVLGVGMMVDNSIVVLEASFRAMDEVQDERRS RRDAAIDAVRVVGASVFGSTLTTCVVFLPLGFLKGISGQYFKPLGFTIVFCMLASLLSAI TIVPLCFTLYKPKENEKAPAYKAVRSLQNSYRTLIGRFLRHKKAVVLGTFLILLFSLFLA TKIRSELMPDIDSATVQISVLQKPGLDLEERDKAMREIEAMVAKDPDVDRYTTLSGGGTG FQALYGGDSSSTVTAYLKKKRSVSTKEKAKTWQKLLETRPDEVITVKSLSDANFGASDED VKTNEGYEVILKGPDLQSLKEKSDALVSEMQKKESLTGIHSSLENAAPRLLVKVDPIKAA AEGLSPIALGQSLNSILGGKTVMKIDLDGEKADVRVEYPKDRFDTLEKIKNIRFSTPRGA AVALDSVATVDFSDSPATITREDKKYVVTIRANYTEKANKETKEEVDRLVESHLGRDIAL AESLRTKNMREEFTDLFRAIAIAVFLVFVVMAGQFESLRFSFMVMTTVPFAMIGSFGLLW LFDATISMTSLLGFLMLVGTVVNNGILYVDTVNQYREDMPLDRAIIESGATRLRPILMTT LTTVLSMVPMAMAIGENGKLMQGLALVDVGGLTASTLLALLLLPVYYRIMYGKKNSIA >gi|333758476|gb|AFIH01000001.1| GENE 618 557107 - 558306 1151 399 aa, chain + ## HITS:1 COG:no KEGG:Closa_0525 NR:ns ## KEGG: Closa_0525 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 42 398 29 380 383 124 28.0 6e-27 MKKKGLILPISCMIASLTFTSAFAAGRYGFSENVDTAPMQTSYERERSPEEWASLRDNTI SWEEIADLVHEYNPTVSSLWINFRDSERRGSYNVDVETARAQVEDAYEKAMAAANGNAVA EALAEMQYQSNSSNFSADSVAQNSDRELAKLSIEQTEKNTVETVKKSFISRENTILQKEI DAVNLEDRKSEKETVERKKAIGQATEIDVLTAKTAADQAELQLASDDGSIKKTSELLQVS LGWKADANPVFPSIPETTRESVEQISLSEDTKKALDNNLSLQISTRKLNLSEGEANRESL SRTIENQKEKIQSDLLSRYQSLKEALDAQSQAILQEENAKKTYEKAERGLKLGSASVKAR NKAKNAYTIASLEKRQADLKLTEEVLDYQAGVNGLCTAD >gi|333758476|gb|AFIH01000001.1| GENE 619 558409 - 559794 1208 461 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227873745|ref|ZP_03991975.1| ## NR: gi|227873745|ref|ZP_03991975.1| conserved hypothetical protein [Oribacterium sinus F0268] conserved hypothetical protein [Oribacterium sinus F0268] # 80 459 34 413 416 345 52.0 6e-93 MVVNYTKWERKLLYRMNGNRDAKYGEKEGSRKRRAAVLFCAVLLCLSAFPSLAENTNAGT ASTENANASATNSAGSNPTWDLEDNRISFYEVPELVEHYSSIAEMEKDILSESTKGIHGV KDAVKEQREDILDALSENINALKDERDNTEDKTVKEALTKEISKLEKVKNSKRILPGLDS SLVEANAALTELSKTDKEMTKAEKKAEKAVRSQFITGKAVLSDAMQNLLFSYAQTENTEN LLEKRVSLMNRSLEKVKKEMSLGKATANDVTAAELSLKSAESDLKKMRNGLDTMKRNIGL SLGWHMNTYQNITIDPIPDFPRDFLNGRNQETDYQAVLVRNGEYGEILREKEKNITGWTE KKQKQAEKAESIRSSLKALWENIETKSLSLKQAESTATLANLKKERALRMQEKGLIGRVD AEGMELDALSSENSYEEARLEYNQAVFRYEEAVNKGIISLD >gi|333758476|gb|AFIH01000001.1| GENE 620 559883 - 560680 899 265 aa, chain - ## HITS:1 COG:ucpA KEGG:ns NR:ns ## COG: ucpA COG1028 # Protein_GI_number: 16130351 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Escherichia coli K12 # 1 263 23 284 285 291 58.0 1e-78 MKKLEGKVALITGAAVGLGEGISTVYANYGAKLIMVDLDPNVEKTAERLRKEYNAEIITV VANVAHKEEMIAAVKKGIEAFGEINVACCNAGVCRLAPFEEFTDEMRDFHIDVNIKGVWN TCQAVIPEMLKEGKGSIVIASSVTGDIVADAGEAAYAMTKAALVGLTKCLAVEYANRNIR VNCSQLGYARTPMVEKMAVESNPEDPESAIQSIAVGVPMKRLAKPTEVGELFAFLGSDES SYLTGSQVVIDGGSTLPETMSIGTN >gi|333758476|gb|AFIH01000001.1| GENE 621 561187 - 562437 1173 416 aa, chain + ## HITS:1 COG:SA0541 KEGG:ns NR:ns ## COG: SA0541 COG0531 # Protein_GI_number: 15926262 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Staphylococcus aureus N315 # 3 335 60 394 494 79 24.0 2e-14 MTLAILPTALVYSELAPLFHTSGGELIYNTVGMNKHVGFFASWLIMAAWIAVPPAVVMAI ATWVSRTFGLVLGFNAIMLIGVCILVLVFLLSLQDVNVLVKAQALCLFVNIVSTLITGIL ILFSGHWSFSNITDGLLKTTISPSLGIPGWIIGMALLITPYFGFETVPQMVEEGDFPIKD TKKAICGSVITCGLIYVFFYFCVAGLDSFQNLTEGTAKDGFLTITNMQRTLGWTVWPVLY GFFSVFMGLGASIMGFWMSTVRMLYSMSEKNFLPAAFKKLNKHKQPILPNIFLLAISLIF ILLMNATTFMNDFFNLMSFGCACAYALTMVSAARIRHKYPSWKSPNALKHGNFFTYLAMI IMLLIAFFCTLGQGIGSWMSFGVYLGVGVLLWLYMVLVRWKKSKVVIETPDGEKKY >gi|333758476|gb|AFIH01000001.1| GENE 622 562642 - 564120 1357 492 aa, chain - ## HITS:1 COG:CAC3230 KEGG:ns NR:ns ## COG: CAC3230 COG4624 # Protein_GI_number: 15896476 # Func_class: R General function prediction only # Function: Iron only hydrogenase large subunit, C-terminal domain # Organism: Clostridium acetobutylicum # 154 433 95 379 450 163 34.0 6e-40 MITNDKGVIPLKHRVIEGLARLAWKNDVNEESKERLVRELSPGPKAVFRCCVYKEREILR RRIRLACNEDANPCRKSSNIIQVIDPACEECPISSYSVTDNCRLCLGKACQNSCHFGAIT MTDQRAHIDPMKCKECGMCASACPYSAIAHLTRPCKKPCPVNAITYNENGLCVIDDERCI RCGQCVHSCPFGAISTKTNVLDVISAIQSDKEVYAMCAPATEGQFGKDISMSAIRTALKK LGFNDMVEVGLGGDMTAAYEALEWSEARKEGKKMTTSCCPAFIHLLQKHFPEQYKENMSE TLSPMAAVSRYLKAIHPGCITVFIGPCMAKKSESQEMGIEGNADYVLSFGEFTSLLRSKD ISLEPEVQPYQEASLWGKNFAGSGGVANAVMECMRERGEDTTDIKLRACSGGKECVTALT LLKIGKLPEDFIEGMACEGGCVGGPSKHKAENEIKKSRDSLLGEADTRKVLDNLKNYPMD QFSMMRTKKIAE >gi|333758476|gb|AFIH01000001.1| GENE 623 564362 - 565825 1316 487 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227871718|ref|ZP_03990127.1| ## NR: gi|227871718|ref|ZP_03990127.1| hypothetical protein HMPREF6123_0066 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_0066 [Oribacterium sinus F0268] # 25 487 23 484 484 594 67.0 1e-168 MSLMGMLFGSSEEEGIRNEEGVILKPIRVLNAKGEKIATVTAEESLSIVQEKEQGQIRLI QLNERHEEIKSLMSCPYAQNADARKELTDMMAEVKKDISNAYLAGKESIRIPESKYELFV YMRRRPTVPIDADKLSRELASGEARENVLQFRSYLEKNPRINVYAAVYSLATDTAYRILK QEYRQYGNVHFILLENRDKKRITWDDPQIQESLKDTPNVCSIGIGVREGEKPRYAIELRN EDVSSVVKKAALLTHHIFNIREEMIDAQAEGHAKAMWELGAKKGKSEEFIRKTVEDLALE DAAYRIPESAVKEIISKAKQRGFIDGEEIGLFRVPVVDRTLLLNLFKQAEDGFLIQDESG SFQYYKDVTGKLVIRYGWTKEGNWYVAPLGKDEREIRAEAAQVMLEGKYLRALQKLLQKN RNRSVIDSFSSLKEFILSYEKMGMDMQEQMESVENGKEYFQEENIEEIQTVIQEVLSPHS VYDNFGF >gi|333758476|gb|AFIH01000001.1| GENE 624 565979 - 567583 1369 534 aa, chain + ## HITS:1 COG:BH3449 KEGG:ns NR:ns ## COG: BH3449 COG1757 # Protein_GI_number: 15616011 # Func_class: C Energy production and conversion # Function: Na+/H+ antiporter # Organism: Bacillus halodurans # 37 530 1 506 516 323 40.0 6e-88 MTKKIQRQIRSLLRIFTLGLVLLFLFAAYFFTTKDTVQQSIWSLFPPLIAIALALVTKEV YSSLFLGILSGALLFSGYNPEQSINHIFKEGIFKVLSDTGNVGILCFLVILGMMVQLMNK TGGSRAFGNWARTHIKTRRASMFATMVLGCLIFIDDYFNCLTVGSVMLPVSDEARVSRAK LAYLIDTTAAPVCIIAPISSWAAAVSGFVEGENGMKLFVETIPYNFYALLSICMMIFLIA LKVDFGPMAIHEKNAMEKGDLFTTEERPYGEREESEYAEGKIMDMLFPVISLVIFCVIGM IYSGGFFSGTDFVTAFSQSDAPTGLVFGSFTALLLTLLYYLLRKSISFQTAMECLPEGFK QMVPAILILTFAWSLKAMTDSLGAREFVAGLVQGSAGAMLSLLPAFVFLIAVGLSFATGT SWGTFGILIPIVVGVFQKTDYSMMILAMSACMAGAVCGDHCSPISDTTIMSSAGAQCVHL NHVSTQLPYALLVATVSVFAYILAGFLKSPWLPLCVATVLLFVILMEIKRRQKV >gi|333758476|gb|AFIH01000001.1| GENE 625 567805 - 568035 402 76 aa, chain + ## HITS:1 COG:DR1942 KEGG:ns NR:ns ## COG: DR1942 COG0236 # Protein_GI_number: 15806940 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl carrier protein # Organism: Deinococcus radiodurans # 3 72 38 107 110 57 47.0 6e-09 MEFERLKEIIVDTLACDEDKVTLDADMEKDLEIDSLSLVELHMALEDELSETIPDGEIGK LHTVKDILDYINGLKK >gi|333758476|gb|AFIH01000001.1| GENE 626 568091 - 568963 843 290 aa, chain + ## HITS:1 COG:CAC3569 KEGG:ns NR:ns ## COG: CAC3569 COG0777 # Protein_GI_number: 15896803 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase beta subunit # Organism: Clostridium acetobutylicum # 34 288 29 284 285 283 55.0 4e-76 MQSPIKTLVDMVKDRDLKQKALSDRVGSTAPIKIPSAFIACKKCGRRALRVRWEEHAFVC PHCGTYGPIGAYYRLNLLYDAGTFQELDKEIEVKDPLDFPEYREKVKDLEKKTGLKEAVV SSKGQIGGIPVVTLVMDSRFLMGSMSQAVGEKITRGIETADREHCPLIIFSASGGARMQE GIFSLMQMAKTSAAIELFSEHGGLFISFLTHPTTGGVTASFATLGDITLAEPGALIGFAG PRVIEQTINRKLPKGFQRSEYLEQHGFIDAIVERKNMRDSLIQILSLHQK >gi|333758476|gb|AFIH01000001.1| GENE 627 569019 - 569831 871 270 aa, chain + ## HITS:1 COG:CAC3568 KEGG:ns NR:ns ## COG: CAC3568 COG0825 # Protein_GI_number: 15896802 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase alpha subunit # Organism: Clostridium acetobutylicum # 6 270 1 265 274 284 52.0 1e-76 MSQELVDKTRDLEPGERVLLARHPNRPHIEDFVENVFTDFFEQKGDHLYDEDRSIFGGIA RFHGRPVTVLGHKKGRGMEENIACNFGMPCPEGYRKAKRLMEQAEKFHRPIITFIDTPGA YPGLEAEEHGQGEAIAKNLAFMSSLHVPVISIVSGEGNSGGALAIGVANKILMLENAIYS VLSPEGFATILWKDSTRAGEAAKVMKLTAEDLKEAGVCDEIIPEVPGGAQENPVALYKEV EKALEKILSAYESMSPEQIREDRLKKYRNI >gi|333758476|gb|AFIH01000001.1| GENE 628 569930 - 570967 852 345 aa, chain + ## HITS:1 COG:CAC3578 KEGG:ns NR:ns ## COG: CAC3578 COG0332 # Protein_GI_number: 15896812 # Func_class: I Lipid transport and metabolism # Function: 3-oxoacyl-[acyl-carrier-protein] synthase III # Organism: Clostridium acetobutylicum # 1 340 1 325 325 231 38.0 1e-60 MQGLKIIGLGSALPGKRVHNDDLAKIMETSDEWIFSRTGIHERRFCEKEESAGTLAIEAG KKALEEAGVPASDLGVILVASMSPDFSSPSMAAILAKELATAEDCIVLDINAACSGFVYG LEVVRGLLAFSRKKRALVVGTEQLSRLLKMEDRTTSVLFGDGAGAAVVEESETDYASFLG SRGDFSIVAPACYTGAFDGFYEDGTENPEKLGQGATEGKHEKIDHLMMDGKSVFLFAIDI IPKCIEGILEKTGERLEEIDHVVCHQANSRIIRNVVRHLKAEPGQFFEDMELYGNTSGAS IPIALKDMEEQGLLKEGEKLLLIGFGAGLTFGAVEIVYGKNTEKK >gi|333758476|gb|AFIH01000001.1| GENE 629 571033 - 571941 951 302 aa, chain + ## HITS:1 COG:CAC3576 KEGG:ns NR:ns ## COG: CAC3576 COG2070 # Protein_GI_number: 15896810 # Func_class: R General function prediction only # Function: Dioxygenases related to 2-nitropropane dioxygenase # Organism: Clostridium acetobutylicum # 5 299 8 301 310 288 53.0 6e-78 MRLDEMLGIRYPIIQGGMANIATGSFAAACSEAGALGLIGTGGIREAEELRKEIRILRER TDKPFGVNLMLMNPETDKMVQICIEEKVPVVTTGAGNPGIYMEALKSAGCKVMPVVAAPI LAERLEKQGADAVIAEGCESGGHVGEMTTMCLVPQTVDSVRIPVIAAGGVADKRQLKAVF ALGAAGAQIGTALLAAKECPIHENYKEAILKARGSDTVVTGRIAGVPVRILKNQMSREYL RQEKAGAEKMELEKFTLGSLRRAVFEGDTKTGSLMAGQTCGQVDKIRTVAEILADICSEI EA >gi|333758476|gb|AFIH01000001.1| GENE 630 572154 - 573095 950 313 aa, chain + ## HITS:1 COG:BS_fabD KEGG:ns NR:ns ## COG: BS_fabD COG0331 # Protein_GI_number: 16078653 # Func_class: I Lipid transport and metabolism # Function: (acyl-carrier-protein) S-malonyltransferase # Organism: Bacillus subtilis # 1 286 1 290 317 220 48.0 3e-57 MSKLAFLYAGQGAQVKGMGKDLYEAFPAFRKAYDEAELDFDLKQLSFIDPEEKLNETRFT QPALVAFATGMTALLREKGILPDYCLGLSLGEYSALEAAEVFSAKTAVELVAYRGRKMEE ASKGIESSMAAILGLSEEELQKIVLSAGGEVYLCNLNCPGQIVIGGEKSAVEQASKLAME NGAKKAIPLKVSGPFHTPFMESAGEALSEYFHKIKWQEPKCTVLHNVLGRERKEGDPSIS ELLREQVAKPVRMEESLKRLLELGVRDFIEIGPGKTVSGFLKKVAKEEGIEDYRVVSLET KEDVEALWKEKLV >gi|333758476|gb|AFIH01000001.1| GENE 631 573074 - 573817 189 247 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 1 243 1 238 242 77 26 2e-12 MERETCLITGASGGIGSAIALKMAEEGYNLVLHYGKNKEAAGELEKEIKARHPETELLLL SADIRKEEEVNALVEKALAHFSSIEVLVNNAGVTRDQLLLKMTMEDFDNVMESNLRSAFL FSKAVSKYMIKKRYGRIVQISSVVGLHGNSGQCNYAASKAGLIGFSKSLAKELAGRNITV NVVCPGFIDTKMTEVLPDAVKEALLSSIPMKKFGFGEDVANAVAFFARRESSYITGESLL VDGGMGM >gi|333758476|gb|AFIH01000001.1| GENE 632 573833 - 575062 1267 409 aa, chain + ## HITS:1 COG:CAC3573 KEGG:ns NR:ns ## COG: CAC3573 COG0304 # Protein_GI_number: 15896807 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: 3-oxoacyl-(acyl-carrier-protein) synthase # Organism: Clostridium acetobutylicum # 4 409 3 409 411 443 59.0 1e-124 MEKRRVVVTGVGTVNPTGNTVEESWKGIREGKVGIGEITAFDSSAFSVHLAGEVKEFHPE TVFEKRELKHMARFTQFAMIAAEEAMLDSGISGSLPPEEMGVIVSSGIGGLKTIEEEHTK GEQKGFERVSPFFIPMSISNMAAGEIAIRHHLKGLCICPVTACAGGSNAIGDAFHRIRDG YETAMLCGGTEAAISELGIGGFATMKALSPATEVSRASIPFDKERSGFVMGEGAGILILE EREHALKRGAKMYAEIVGYGANCDAYHITSPAPGGEGAAACMELALKDAGVTATEIDYIN AHGTSTHLNDLGETAAVKHVFKERAYSVPISSTKSMTGHLLGAAGAVEAIFSVLALRDGF VPGTMNYQVKDEELDLDYVPNKGREKELRYTMSNSLGFGGHNACLVFKK >gi|333758476|gb|AFIH01000001.1| GENE 633 575311 - 575739 409 142 aa, chain + ## HITS:1 COG:SA1901 KEGG:ns NR:ns ## COG: SA1901 COG0764 # Protein_GI_number: 15927673 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases # Organism: Staphylococcus aureus N315 # 4 142 5 143 146 164 59.0 3e-41 MPKLNIEEIEAIIPHRYPFLLIDSVEDYNPGEYAVAKKCVTANEPFFQGHFPQYKVMPGV LIVEALAQTGAIALLSLPEYKGKIALFGGIKNCKFKTPVRPGDVLELCCRLTNRKGPVGI GEAEAKVNGKIAVKAELSFAIQ >gi|333758476|gb|AFIH01000001.1| GENE 634 576006 - 576500 645 164 aa, chain + ## HITS:1 COG:no KEGG:EUBELI_01717 NR:ns ## KEGG: EUBELI_01717 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 1 143 1 143 145 137 49.0 1e-31 MLRDAIQDLYNKFRIYFYMQVFAKFEKREASLTTVESYSVECIKALGEPTVQEFAIMMGI SAPNAAYKVNALVQKGYIEKIQDENDHREFHLRPTRKFWEYYDVSYRYVKKVEERCKKRF TPEEMDKLEEMVRIITTELMPELNVMKFTKEGAENHVSIGTEEK >gi|333758476|gb|AFIH01000001.1| GENE 635 576698 - 578851 2726 717 aa, chain + ## HITS:1 COG:CAC2278 KEGG:ns NR:ns ## COG: CAC2278 COG0342 # Protein_GI_number: 15895546 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecD # Organism: Clostridium acetobutylicum # 1 396 1 405 417 278 41.0 2e-74 MNKKFKATLQLLGVLILTAAFCVLGYMNANNIKLGLDLNGGVSITYQTVDENPTAEQMSD TVYKLQMKAQSYSDEAQVYKEGDNRINIDIPGATDANAILEELGEPGTLEFADENGNVLL TGDDVKTASAGMTNQNNNKEYVIELVFNEAGAKKFEEATKNNVGKRIYIIYNNEVISSPN VKEAISGGQASISPIESYDEANKIASTIRIGALPVKLTELRSNVIGATLGVEAIASSLKA AAIGIALVILFMLLVYRLPGLASSIALVLYVGLEMVLLQAFEVTLTLPGIAGVILSIGMA VDANVIIFTRIKEELGQGNSVEKAIKAGFEKALSAILDGNITTLIAAAVLYLRGSGTVKS FASTLAIGIVVSLITALFVTRALLNAFLAMGAENPALYGIKKDTKIIDFIKFRKIAYLVS AVVIVAGFAMLWMNKKNTGYIFNYDLDFKGGSSTTITFDKDLSMEEVDQQVIPLFREATG GDASAQAAKVAGTNEVIIKTRTMSTEERAKLYNSIQEKFSISEDKIVTENISGAVSKEMK TDAVWALTIAIFCMLIYIWVRFRDIKFASSSVLALAHDVLVTVTFYAAFRWAVGSNFIAC ILTIVGYSINATIVVFDRIRENIQKGEVKKKGLEFAVNEAISNTLTRSINTSITTFITVF CLFLFGVSSIRDFSMPLMVGIVSGAWSSVCIAGPLWYDFVSLSKKNKEKAQAEKSKK >gi|333758476|gb|AFIH01000001.1| GENE 636 578934 - 580121 1126 395 aa, chain + ## HITS:1 COG:CAC2282 KEGG:ns NR:ns ## COG: CAC2282 COG0343 # Protein_GI_number: 15895550 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Queuine/archaeosine tRNA-ribosyltransferase # Organism: Clostridium acetobutylicum # 8 387 2 369 376 525 64.0 1e-149 MAAVKMKYEIVGQCGRAKSAHMETVHGVIETPVFMNVGTVAAIKGGVSTDDLRLIGTQVE LSNTYHLHVRTGDKVIKELGGLHRLMNWDKPILTDSGGFQVYSLAKTGRKIREEGVEFRS HIDGRKIFMGPEESMEIQSNLASTIAMAFDECPPALADRQYIEPSVERTTRWLLRCKKKM EELNEEESTINKNQLLFGINQGGILSDVRINHAKQISELDLPGYAVGGLAVGESHEDMYR ILEDVVPFLPKEKPTYLMGVGTPENMVMAVDRGIDFFDCVFPSRNGRHGHVYHAYGKLNL WNLAYEKDFRPIEEGCDCPACKGIRLEDGSYTGGYSRAYIRHLLKAKEMLGMRLCVLHNL SYYNRLMREMRFAIREGRWEAWKTDALYKLKIQNS >gi|333758476|gb|AFIH01000001.1| GENE 637 580226 - 580504 378 92 aa, chain + ## HITS:1 COG:aq_1254 KEGG:ns NR:ns ## COG: aq_1254 COG1862 # Protein_GI_number: 15606479 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YajC # Organism: Aquifex aeolicus # 10 86 14 88 102 63 38.0 1e-10 MGNIGVWGTVAYIVVIVGIFYFMGVRPQQKERKKQQEMLNSLAVGDTVLTTSGFYGVVID LTDDTVIVEFGGNKNCRIPMQKSAIVQIEKAK >gi|333758476|gb|AFIH01000001.1| GENE 638 580531 - 581607 969 358 aa, chain + ## HITS:1 COG:CAC2895 KEGG:ns NR:ns ## COG: CAC2895 COG1181 # Protein_GI_number: 15896148 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanine-D-alanine ligase and related ATP-grasp enzymes # Organism: Clostridium acetobutylicum # 2 356 3 340 343 259 43.0 5e-69 MKNIVLLFGGQSTEHEVSCRSVLTVLKAVNREKYRPILLGITKAGEWIPVENTGKIEDGS WREDKRRAMLLPDAGLKSIVFFEEDGSCRMEKADLVFPVLHGKGGEDGTVQGLLELAEIP YVGCGVLSSAISMDKISTKLAVEKVLERQGVRQAKYIALSHSEWKKEKRRAEICREVEEE LHFPVFVKPSNAGSSCGVSKVENQEALPLAVEKALQVDRRVLIEEFIKGRELECAVFSGV PGEVVASSVGEIKAAAEFYDYDAKYNNPDSKTELNPDLPSDVEEKIQKAAKSIFLAVDGF SLSRVDFFFTGEEIVFNEINTLPGFTSISMYPMLFEKAGWNIEELVEKLIASAENRPS >gi|333758476|gb|AFIH01000001.1| GENE 639 581791 - 582252 340 153 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227871696|ref|ZP_03990107.1| ## NR: gi|227871696|ref|ZP_03990107.1| hypothetical protein HMPREF6123_0046 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_0046 [Oribacterium sinus F0268] # 16 150 1 135 138 144 54.0 2e-33 MHAEFFFVAKILGRQMKVQVQLTTKQKMDGEEDRFSVSLQGVLLSRGDSFMLSYFQENVH HSLELFPKEKRVVMMRNWKDRQRVEYIAGVKWSVDYETELGTLPLSFATRSVEFLYEDFR AGRAEILLSYLLYQFEQLVAETELSIAILPLKG >gi|333758476|gb|AFIH01000001.1| GENE 640 582313 - 582834 671 173 aa, chain + ## HITS:1 COG:no KEGG:Closa_3786 NR:ns ## KEGG: Closa_3786 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 7 154 1 145 149 117 52.0 3e-25 MLLAISVQTVFSILFAVLIILLAILVILYILGRRLQEKQAMQQPMLEANTMEVSMLIIDK KKLGVKEAVAAGLPEQVEKQMPIYARLTKLPVVKAKVGPKVLTLMADPSVYEILPLKKEV KVAVSGIYIRSVKSVRGGTIPEQPKKKGFLAKLRGKAENAVKEAKTEQGKKKK >gi|333758476|gb|AFIH01000001.1| GENE 641 583146 - 587036 4353 1296 aa, chain + ## HITS:1 COG:CAC3143 KEGG:ns NR:ns ## COG: CAC3143 COG0085 # Protein_GI_number: 15896392 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, beta subunit/140 kD subunit # Organism: Clostridium acetobutylicum # 6 1296 2 1240 1241 1552 61.0 0 MKKSKMHPVRTGKNLRMTFSRSKEVLEMPNLIEIQKDSYEWFLHEGLREAFDDISPIQDF AGHLSLEFVDFKLVKNEAKYSIEECKERDATYAAPLKVKVRLFNKDKEEINEHEIYMGDL PLMTENGSFVINGAERVIVSQLVRSPGIYYGIDHDKVGKELYSCTVIPNRGAWIEYETDS NDIFFVRVDRTRKVPVTVFIRALGVGSNKEILDLFGDDPKLQASIEKDPSENYQEGLLEL YKKIRPGEPLSVDSAQSLLNSMFFDPRRYDLAKVGRYKFNKKLHFKNRIKGHTLAEAVYS TETGELLAEAGTMVSKELAVSLQNAAVPYVLIDGPTRTEKVLSSMQVDIKNWIPEEINAE ELGVNELVYYPALKQILEECEGKGNAALEEAIRKNIHALIPKHITKEDIFTSINYALNID EEIGTADDIDHLGNRRIRAVGELLQNQYRIGLSRMERVVRERMSTQDIDEITPQSLINIK PVTAAVKEFFGSSQLSQFMDQNNPLSELTHKRRLSALGPGGLSRDRAGFEVRDVHYTHYG RMCPIETPEGPNIGLINSLASYARINEYGLIEAPYRVVDKTDKTNPIVTDEVVYLAADEE DNFIVAQANEPLDEEGHFKHDNVSGRYRDQTSAFPKASIDLMDVSPKMVFSVATSMIPFL QNDDANRALMGSNMQRQAVPLLTTESAVVDTGMSNKAAVDSGACVVAKNSGTVTLSSSSK IVIKRDKDGGYDEYKLMKFVRSNPSNCYNQKPIVDTHDHVEAGDVIADGPSTKNGEIALG KNPLIGFMTWEGYNYEDAVLLSERLVQNDVYTSVHIEEYELEARDTKLGPEEITSDVPGV GDDALKNLDERGIIRIGAEVRAGDILVGRVTPKGETELTAEERLLRAIFGEKAREVRDTS LKVPHGAYGTVINTMVFTRENSDELAPGVSQSVRVYIAQKRKIGVGDKMAGRHGNKGVVS RVLPVEDMPYLPNGRPLDIVLNPLGVPSRMNIGQVLELHLSLAAKALGIDVSTPIFDGAT EVDIQQTLLLANDYVNLSWEEFSEKHKEELEPEVYEYLGAHLEHRKEWEGVPIGIDGKVQ LRDGRTGEKFDGPTSIGFMHYLKLHHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFG EMEVWALEAYGAAYTLQEILTMKSDDVAGRVKTYEAIIKGQNIPAPGVPESFKVLLKEMQ ALCLDMQVLDEEQNVVEITEDLYDANQDMHRLLSGGDYRTEKQENFGAYGYTKQEFKDGE LVDSDEENEDEEELSDAEAEEFFESITSGLADDEDE >gi|333758476|gb|AFIH01000001.1| GENE 642 587047 - 590748 3617 1233 aa, chain + ## HITS:1 COG:CAC3142 KEGG:ns NR:ns ## COG: CAC3142 COG0086 # Protein_GI_number: 15896391 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, beta' subunit/160 kD subunit # Organism: Clostridium acetobutylicum # 12 1181 5 1160 1182 1604 66.0 0 MANFQSGNEPVQFDSIKIGLASPEKILSWSYGEVKKPETINYRTLKPEKDGLFCERIFGP VKDWECHCGKYKKIRYKGVVCDRCGVEVTKSSVRRERMGHIKLAAPVSHIWYFKGIPSRM GLILDISPRILERVLYFASYVVLDPMESSLSYKEVLSEKEYRDAIEQYGYGNFRVGMGAE AIFELLSNIDLEKEYNNLRAELDNSSGQKRARIVKRLEVVEAFRSSGNKPEWMILTNLPV IPPDLRPMVQLDGGRFATSDINDLYRRIINRNNRLARLLELGAPEIIVRNEKRMLQEAVD ALIDNGRRGRPVTGPGNRALKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKIY QCGVPKEMAIELFKPFVMKELVNTGKAHNIKNAKKMVERLDEGVWDILEYVIKEHPVMLN RAPTLHRLGIQAFEPILVEGKAIKLHPLVCAAFNADFDGDQMAIHLPLTQEAQAECRFML LSPNNLLKPSDGGVVAVPSQDMVLGVYYLTQEREGDTGEGMLFKSIDEAILAYENHFVTL HAKIRCKVRKAWVSEDGEKEMLEGIIDTTVGRLLFNEIIPQDLGFIDRSIPENRLLPEIN FLVKKKNLKQILEKVMDVHGAMQTALTLDDIKSIGYKYSTKAAMTVSIHDMTVPATKEDL LENAQKTVDRIAKNFRRGLITEEERYKEVIETWKNTDDQLTHDLLTGLDKYNNIFMMADS GARGSDKQIKQLAGMRGLMADTTGKTIELPIKSNFREGLDVLEYFISAHGARKGLSDTAL RTADSGYLTRRLVDVSQDLIIRELDCAEGRDTIPSTEITELSDGQEKIESLQERITGRFL AEDIIDPETGAMVIKANHMVTPKRAPQVMNALSKMGRHSVKIRTVLTCRSKSGICAKCYG ANLATGKPVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAGGDITQGLPRVEELFEARK PKGLAILTEIPGVVEIRDTKKKREVIVTDNETAQSKTYLIPYGSRLKVTEGQVLEAGDIL TEGSINPHDLLKIKGVKAVQNYMISEVQRVYRLQGVEINDKHIEMIVRQMMKKERINEAG DSRFIPGTTVDRLDFEDENERLIKEGKTPAEGKRTMLGITKASLATDSFMSAASFQETTK VLTEAAINGKIDRLIGLKENVIIGKLIPAGTGMRRYRNVKLSTDKEEHVEYMPNVSEETA EPLSTEEIFDADPRGLSGLAEALRAIKDGENEL >gi|333758476|gb|AFIH01000001.1| GENE 643 590905 - 591465 553 186 aa, chain + ## HITS:1 COG:lin0482 KEGG:ns NR:ns ## COG: lin0482 COG1309 # Protein_GI_number: 16799557 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Listeria innocua # 2 167 4 168 186 105 36.0 6e-23 MSNLTKRALEASLKKLLLKKPLDKITISDIADDCGMNRMTFYYHFQDIYDLIAWSFDEDA EKILAGKKSYETWQEGYLAIFLSILENKPLIMNVYRSVSRDQLEQFLFKVSYRLLRNVVE EEDKERVVSEEDKDFIANFYKYAYVGLILDWIRGDMKENPEKIISRMSLLMQGNFARALE AYSKYR >gi|333758476|gb|AFIH01000001.1| GENE 644 591632 - 593404 1415 590 aa, chain + ## HITS:1 COG:SA0102 KEGG:ns NR:ns ## COG: SA0102 COG4716 # Protein_GI_number: 15925810 # Func_class: S Function unknown # Function: Myosin-crossreactive antigen # Organism: Staphylococcus aureus N315 # 1 590 1 591 591 725 56.0 0 MYYSSGNYEAFARPEKPEGVENKSAYLIGSGLASLAAACFLVRDAQMEGKRIHILEKESH PGGALDGDKMIAGYVMRGGREMDNHFECMWDLFRSIPSIETEGVSVLDEYYWLNKKDPNY SLCRATKNRGEDAKTENKFGLSDKGSMEIMKLFMTPDEDLANVKMTEIFDEEVFKTNFWM YWRTMFAFKDDQSALEMKRYMQRFIHHIGGLPDFKALRFTRYNQYESMVLPMVKYLEEHG VQFHYGVSVSNVLFDISAGKKQARRIELLRDGKEESIDLTENDLVFYTNGSNVENSTYGS QTEATGMDGEIHPGGTFDLWRKIAAQDASFGKPDKFCTDPEDSNWVSATVNTLDEKILPY IKNICKRDPLSGKVVTGGIVTVTDSSWLLSWTINRQPQYRNQPKGQVLVWLYGMFSDKPG DFVKKSMRECNGQEICEEWLYHLGVPVEEIPELAAHSANTVPVMMPFASAYFQPREEGDR PLVVPEGSVNFAFIGNFAETPRDTVFTTEYSIRTAMEAVYTLLNVDRGVPEVWGSVYDIR DLLNATVALRDGKKITDLQLGFIQDIVLKAALKRIKGTEVEKLMKKCKMI >gi|333758476|gb|AFIH01000001.1| GENE 645 593685 - 595625 1235 646 aa, chain + ## HITS:1 COG:no KEGG:Closa_0992 NR:ns ## KEGG: Closa_0992 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 15 644 11 628 630 662 50.0 0 MKKSMIQFSYDGLCLQFDKENLRYSILAGKTTWETDEFFSPFFRVQFCDKPIYFKDAEVQ KHELVKSGVGEGIRSSYRDFVLSKSAGSESGKEETLSFSFETFVWIEYSTKQVYFEWIPF TEAPENAIEQVFFPGPFSFQKERNDWYTILPKEQGILIPNTWDVSFKQDGFNGRFGTASA YLPVFGQVKEGEGYLAESLTPWNMGYEAVHEAGTNKTAVQFRIEPSLGLMEYRRIMRYLF LSDCDYTSLLKCYRELAREEGKLKTLKEKEVSTPSVKKLIGASFVHKGIKTCVQPDSEFF DQDAPDKNNRLVPFRKRAEEMRAFKADGVEKLYLHLDGWGDAGYDNKHPDVGPACVEAGG WEGMRELSKTMEELGYLFGIHDQYRDFYKKAESYDDDLACKSADGSIYTHARWAGGPQAY LCTSQALYYVRRNFERLLEEGVHLDGAYLDVFTCNEGDECANPRHKMRRRDSYEYRNACF RYLLSKNILPSSEEVNDWAVPWLVFCHYAPYDFMLREPRSPKYGIPIPMFNLVYHDCLII PWMMEKLPEEDYMLYALLNGGAPYLVRDPAYMGIDGAFTPEEEMPWKTHLERVREVSDFH EKVGEAELVRHEILDEKGYRQRSSFANGYTVEVDFKEGRYQISSIK >gi|333758476|gb|AFIH01000001.1| GENE 646 595648 - 596991 1479 447 aa, chain + ## HITS:1 COG:BH1864 KEGG:ns NR:ns ## COG: BH1864 COG1653 # Protein_GI_number: 15614427 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Bacillus halodurans # 4 369 3 359 461 124 28.0 4e-28 MKKRTQKLLALATVLTMGAGMLASCGNKASSGENASGETKAATGEKASDEKKAGGKTTLS LAIWDENQRAMTESLAEAYNKEHPDVTVEVQLTPSKGGEYWTKLEAALTGGKAPDVFWLN VLHLDSYMEGGVLADLTDAIAKSDIKDNFPESLVNNYVRDGKYYAVPKDFDTNALWYNKA IFDKAGVSYPTNDMTYEDLVAKAEELKKAGLPDGVYPFACPVDFQTWYYQTVFANGGWIL SEDKKTSGYDDPKTQGGIQCWIDMIDKGLSPTSAVLAETTPDAMFEGGQLAMIYAGSYMV PEYIGNDNIKDTIDCVVLPSFNGVQTNCINGLGYAVYEGSKNKEAATEFAIWLSSKEAMD IQGNSGVVISARNESQDLFKNSSDKYDLSVYTKYTDKAYPLPVCKNASQLYNMEAKALQK AYSGEESLKDACAALKKEADEFLAKNQ >gi|333758476|gb|AFIH01000001.1| GENE 647 597053 - 597958 1022 301 aa, chain + ## HITS:1 COG:lin0218 KEGG:ns NR:ns ## COG: lin0218 COG1175 # Protein_GI_number: 16799295 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Listeria innocua # 22 301 15 292 292 199 41.0 4e-51 MNSQEKKAGLSWKIKDWIAGYVFIAPVTIGLTVFYIWPFLQNFWFSFNDVNKFNVTHFIG LENYKQLLSDPEVFQTFGNTLKYVVVTVPVGLFLSLVTAALLNSNIKGKSLYRTLYFLPS VTMAAAVAMVWKWVFNGQMGILNSIITSLGGPRIGWLIDPKLALYVIMLVGLWMSVGYNM IILLAGMQGISKTYYEAAAIDGAGPITQFFKITVPLLTPTIFFVMITSIISGFQVFDVVY MMVGKLNPAYEATQTVVMLFYRQAFDYGYKGYAAAISILIFGAIMLVTLIQFVVQKKWVN Y >gi|333758476|gb|AFIH01000001.1| GENE 648 597977 - 598804 869 275 aa, chain + ## HITS:1 COG:lin0219 KEGG:ns NR:ns ## COG: lin0219 COG0395 # Protein_GI_number: 16799296 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Listeria innocua # 8 274 15 281 282 226 44.0 5e-59 MNKKFSWKKLFVHLVLIAGIGVTIFPFVWMILTSFKTSGEAMQVPPTIIPKKFITTAYTQ IIGSLPFAQIYLNTIISTVITVLAQLLFCSMAGYAFARIKFPFKNAIFILLLSVLMVPGQ IFLIPQYLIIQKMGLLDTIPALFIPNLFSAFGTFLMRQFFLSLPDELEEAAIIDGCNRYQ IFGRIMLPLVKPGLVTLSIFTFKFAWNDFMWPLIVNTSPKNMILGPALSTLQGQFTTQYP MQMAGAVMAVIPVILVFFIFQKQFIEGVAQSGIKG >gi|333758476|gb|AFIH01000001.1| GENE 649 598911 - 600029 1160 372 aa, chain + ## HITS:1 COG:no KEGG:bpr_I1216 NR:ns ## KEGG: bpr_I1216 # Name: not_defined # Def: hypothetical protein # Organism: B.proteoclasticus # Pathway: not_defined # 47 346 20 315 315 124 30.0 5e-27 MKRKMHSGKLRLGAIALLVTLLFSSCGGAKQMAYEDYLSSESADKSVSGLGASGSAKEET SELSKSAEVKEVYETSADSSGYVENEVPNNPVEATEANVNPAEISEKKIRTVNLSLECKS MEGAEKELKDKVKAQGGYIESEDYSAISQWNDTKRMNFTIRLPKGNVDSFLDFLNGEGRI LSKSENLQDVRLQYRDAKNHIKALETEQERILALMEKAETVDQLIALESRLTDIRYQLDS YNSEILDYDNKVDFSTIYLELQESIDGKINQSGDYSFFDRVRDGFFRNLFEIRLFFSDLA LFVLVFIPQILLVLLAIIAIVFANKKLLNRKKKEKKPEQNKVEQNKVEQEKKEQEKKEEL PNTEESLQKEKE >gi|333758476|gb|AFIH01000001.1| GENE 650 600080 - 600328 262 82 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227871688|ref|ZP_03990100.1| ## NR: gi|227871688|ref|ZP_03990100.1| carbon storage regulator [Oribacterium sinus F0268] carbon storage regulator [Oribacterium sinus F0268] # 1 82 1 82 82 117 86.0 3e-25 MLILRRKKNESILIGDNIRLTVIETAADGVRIAIDAPKHISILREELSHAEEENRSAVAK DQSAIFNLQNGLLQRLSVGSTE >gi|333758476|gb|AFIH01000001.1| GENE 651 600377 - 600838 441 153 aa, chain - ## HITS:1 COG:BS_yviF KEGG:ns NR:ns ## COG: BS_yviF COG1699 # Protein_GI_number: 16080591 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus subtilis # 1 141 1 139 143 77 31.0 7e-15 MQLHTKDYGVIDYEEKDLFFFPDGLFGFSQVQHFLPLCLNEEEDSTILLLHGVEDPNLAF VVINPFTLDPDYAPTLTEEELSYLGVKSAEELSYYVTCVLREDYLSNTVNLKCPLVINPE NHKGMQVILESSGYDYKHTLGSFASVQEKKAAV >gi|333758476|gb|AFIH01000001.1| GENE 652 600875 - 601441 448 188 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227871686|ref|ZP_03990098.1| ## NR: gi|227871686|ref|ZP_03990098.1| hypothetical protein HMPREF6123_0037 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_0037 [Oribacterium sinus F0268] # 1 188 1 191 191 215 58.0 1e-54 MGQVLKISTTDFRALHLSMGGRLVPSDLLDEARGRELRVSAIESRNVGKSDRDFQRAVNI QYQRATQHVQASLHKSSAAQEINPEALPLTKQKAATPNLYTASNTQRAAAENLEAYAERQ ALSQEKNAGYLQDRGAFEMRVHQGEITYLPAMNMTIITQMPEVKFEYTGDFVYFPKSPEM GASMDVVS >gi|333758476|gb|AFIH01000001.1| GENE 653 601654 - 602883 1181 409 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227871685|ref|ZP_03990097.1| ## NR: gi|227871685|ref|ZP_03990097.1| hypothetical protein HMPREF6123_0036 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_0036 [Oribacterium sinus F0268] # 1 409 1 409 409 615 83.0 1e-174 MRVTARTYYQDYAKSVNDLHTKLNKSMEQVGNGRKFNEAKEDPIAYYAGKRIENQHSDAE AKKTIIDDVKNRLYQQEKGALSIQDDMRTVNTKVVNLKNDTTNANASTVETFESEFTQRL HSVVNTLNSQYDNFYVYGGNDMTTVPFSLKEDLDGAPPSVTLTYSHKFPGDEKATELNIK YSYDGTNYKNEFSGKASDGTALGEGDTLKLILSAMREQGKMSTGYGSLRDRSTLLDTYTG GLNMITGLSSDTLKGLSDTDAINRIKGASNGGPVVAEEDSLMNSPVALLSKSVLTTHNYV KALKTNTNVSTAKERFHKDLSDFINQNDDSESRVSDTYRVLGIKYAALEATQSKLDITMD TLQAEYSSKLAIDPYDAVVKMYSYQYSYNAAMKVGANIMQSSLFDFVGR >gi|333758476|gb|AFIH01000001.1| GENE 654 603119 - 604141 838 340 aa, chain + ## HITS:1 COG:BS_ansA KEGG:ns NR:ns ## COG: BS_ansA COG0252 # Protein_GI_number: 16079415 # Func_class: E Amino acid transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D # Organism: Bacillus subtilis # 7 316 1 308 329 280 47.0 3e-75 MRETERMKKLLLIGTGGTIASRETGDGLSPGLQAEEIVSFVPEVRNLCEIEVLQLCNIDS TNMNPKIWRELVQAIKENFDRYDGFVVLHGTDTMAYTSAVLSYMIQHSRKPIVVTGSQKP IDREGTDARVNLRDSILYAMDDYSENVVLIFDGNVIAGTRAKKMQARSFNAFQSVNFPVL ARVQDGRIIRYLPYIPEREPVRFFTEISDSVCVFKLIPGTRPELLSYLFENYDCIVIESF GVGGIPDALLDTVYREMNKWKESGKVLVMATQVMNEGSNMEIYRVGQKIKKDFQLIEAYD MTLEAVVTKLMVLLKQYGKSYEALQKAFYREVNHDILCAV >gi|333758476|gb|AFIH01000001.1| GENE 655 604289 - 605311 878 340 aa, chain - ## HITS:1 COG:FN0948 KEGG:ns NR:ns ## COG: FN0948 COG0053 # Protein_GI_number: 19704283 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted Co/Zn/Cd cation transporters # Organism: Fusobacterium nucleatum # 1 339 34 372 372 305 47.0 1e-82 MGILSHSIAITLDAVNNLSDALSSVITIVGTRLAGRPADKKHPLGYGRVEYLTASIISIL VLYAGITSLIESIKKILHPEKPDYSTVSLLIIFVAVLVKFFLGHYVKKTGEKVHSDNLIA SGEDAGHDAILSLSVFLSALLFRFTGLSLESYLGLVISVFILKAGFDLLRDTLSQILGER VDSRLSEEIKAEVSGIDSVLGCYDLLFHNYGPDTYLASTHIEVNENMTAKELDGLMRKIE KQIFQKFNIILSGISIYSRNSENPELSKLQKEVEEIVLSKEHILQMHGFYLQKETDTIEM DLVIAYEEKDRHGLAEAIKHELSEKFPLYHFRITEDYDIS >gi|333758476|gb|AFIH01000001.1| GENE 656 605396 - 606736 1003 446 aa, chain - ## HITS:1 COG:no KEGG:Closa_3037 NR:ns ## KEGG: Closa_3037 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 30 434 20 423 433 393 54.0 1e-107 MNFHFFQKDVHEKVQKNIQLLHHVLPNWERYLLMCTVPLYFMLISLSQQPLSEIFSGIRN IVREPDILISDYFVVGGVGAAFFNAGCLSILSLGILCIAKSDFDGSCIVAACLMFGFSLF GKNLLNIWSILIGYVLYAKVHRVPIKKYLYIGFYGTTLSPIITQIILMKNFLFFGQLLLA IAVGIVIGYVLVPISLHTKHAHMGYSLYNVGFSCGIIAIIVTSLMKSFGAKIESRLLWDS SHRPFGFFSLLSLFLTLILITLILGGDDTVSSYRELLKESGQGGTDFLKKYGDYPTILNM GINGLLMTVLLFAVGGDFNGPTIGSIFCVVGFSALGKHIRNILPVLLGVIIASYLKIWDL RDPSATLTLILSTTLAPITGDFGIFWGIAAGFLHSSVALNVGAVYNGTNLYNNGFAGGIV ALFLVPIIQAVRSRMKPSALYKNEGK >gi|333758476|gb|AFIH01000001.1| GENE 657 607056 - 608891 2030 611 aa, chain - ## HITS:1 COG:TM0083 KEGG:ns NR:ns ## COG: TM0083 COG1256 # Protein_GI_number: 15642858 # Func_class: N Cell motility # Function: Flagellar hook-associated protein # Organism: Thermotoga maritima # 4 234 5 226 858 97 31.0 6e-20 MVRATFAGFDTALSALRMNQKKLDLVGHNLANMNTEGYTRQELKTSSINYENPTSFYMNS NDTNVGFGVGMDGVRQLRDQFLDKQYRTQNGRSAYTEGLGESLKSLSLFLDETKVDGIRA SFDNIQKSLTNMQDPSKVQDPVYEGELMSRVQAMTTLMNSAAESIVQAQKNEFHKIDGTG TSENGAIQKINSLIEGIGDLNTRIKKNQLLGSPVLELQDERNKKLDELSKYVPIETESFS EEYTVGTETRYRIYNYDSAGNITGRSDWPEDLRVNLVYRDSSAGNGAEVKKITLVNGAID GNLQDSTGRHRNVGKVELATPTPATVPPQPAYSQDNPLNTQLKFTGYSKRTATPGTFNND AFTTNTKNVRFASGTVQASLDMLSTSDVRALVHGGGVINLADLKASNEMTAYSYDYYMGK LDLLAETFTKNMNEINKKGNTDYTKTPPVTNPNHILMINKDKAGGNDPSEVTAANIGISR GWVNGTTHIGTRGFRNNPSTTNQGDTTDTVLEMLEQMTSPMMKMNNTKTSYADYMNNLST TLATDSYSNNNSYTINKAVLDGINTSRDQISGVSLDEEAANMMTYQSSYNAAARLMTTLN NTLETLLSIGR >gi|333758476|gb|AFIH01000001.1| GENE 658 608936 - 609373 399 145 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227871682|ref|ZP_03990095.1| ## NR: gi|227871682|ref|ZP_03990095.1| hypothetical protein HMPREF6123_0034 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_0034 [Oribacterium sinus F0268] # 1 145 2 145 145 162 66.0 9e-39 MTIENNKKWKELLPVISELSLLVSALCDFEDSLSIAASKDAQEEINALVTEAQPTLLRFK GLEKKREKLQKELGLAPTSLSALLKEIPEEEREEWAEKIEALEKNLNRFINSKENADRIL QVRLSDISLQLEGKPEVTNFRDRRV >gi|333758476|gb|AFIH01000001.1| GENE 659 609386 - 609697 356 103 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227871681|ref|ZP_03990094.1| ## NR: gi|227871681|ref|ZP_03990094.1| hypothetical protein HMPREF6123_0033 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_0033 [Oribacterium sinus F0268] # 1 103 1 103 103 134 77.0 2e-30 MNFSIRPDLNTRVDYQTRQASLVNKPAEQTESIQKVDKDTVSISKGKAIDDRSFVAALSK ATADSLKVNASDKRVAELHQQVQSGTYRPNAQRIAEKILGYKD >gi|333758476|gb|AFIH01000001.1| GENE 660 609963 - 611369 1096 468 aa, chain + ## HITS:1 COG:no KEGG:Closa_3422 NR:ns ## KEGG: Closa_3422 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 468 1 473 473 221 28.0 6e-56 MANILQVGSTPVTPDTSIQHGRVTPDLSVKNPVNPNAVNRADGQDTGQAGSSTAEGHFSG VDFEGNYAAFIRTLSETGNLPKEMETVLFGDAAIALSQNKGEIGESINELFSALEMESPE DLKAFLQNQQQSQIKFSGNLFNNLRGMLKENISPSLKNAIFRFAKSYNDYSSSPHFLEQL KTISEDIDKLLLPSFQGEFEDLLSQMNFEEKMGQTEGNTSLINKQIIPFLSNYISRTHDY GAVRNAVVLFILYAVKYENGSEESLVKEKEALMNNPDFRLLFKGDPEEAFQDSLQNLDRK SQNTFPKLFNQFLQAGAEGKAGTEHISHFQDVLKGLLVNESVYMPLQHLVLPFRYEGKDV MSEMWVEQEAEDSSGGKLTKMLLKFSIPSVGNFEMISGIANMRVDMNLYMPEDLMEKQKD VEGVVSTILRRNGLSVANIGIYKKTRDFRVQEVFPEIKEAEKGLNVRI >gi|333758476|gb|AFIH01000001.1| GENE 661 611443 - 611778 326 111 aa, chain + ## HITS:1 COG:TM1672 KEGG:ns NR:ns ## COG: TM1672 COG2257 # Protein_GI_number: 15644420 # Func_class: S Function unknown # Function: Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB # Organism: Thermotoga maritima # 10 84 7 81 86 65 46.0 3e-11 MTDFTRLMEKKAAALKYDSEKNGAPVIVAAGMGEMAERITETAMKSGVPVYEDDSLASLL TQMKLGAEIPEELFQAIVEIYIYFLGFTGDPEKDKEEREKRREERKNALSS >gi|333758476|gb|AFIH01000001.1| GENE 662 611906 - 613297 1355 463 aa, chain + ## HITS:1 COG:SP2190 KEGG:ns NR:ns ## COG: SP2190 COG5263 # Protein_GI_number: 15901997 # Func_class: R General function prediction only # Function: FOG: Glucan-binding domain (YG repeat) # Organism: Streptococcus pneumoniae TIGR4 # 264 454 514 689 693 145 39.0 2e-34 MHLLWKRQVFLLLCLFFVLLFREKVFAGTSPIKNIRININSKLETGDSPGDIKLTVEETA KHEVGVGAKSSLFTVSSAEWGGRQVPFVSVGDELQMVLTLTPVDVTEYFFLGAYQASSFH IEGGYYVSSKREGDDLVLTVKVRAVQGSYDAPSSVDWNERTLGMAFWNPGKVDSGFYHVQ LFRNGSRIYEIERVAGNQYNFYPYMTRPGRYQLKVKTLIKNDAEKKYARNSGYTESSELQ IDDRDVSDGKGRLGDKVVGGTEKKIGWNQEGNTYIYRKPSGEFLTGWGLIDGYWYYFLPD GKMVKGWQKIDNKWFFFNLNGSMAVGWIKDNGQWYYLVPDTEAGNGLIAGELLPAGWHVI GGRYYYIDPDGKMHKGWVFDQGKWYYLNELENSLEGVMFSGFVVRNEKTYYLNKNGAMET GWLSIDGNWYYFQEDSGEMLKNTTVDGFPLNADGILDQNTFTR >gi|333758476|gb|AFIH01000001.1| GENE 663 613315 - 614652 1230 445 aa, chain + ## HITS:1 COG:SP2136 KEGG:ns NR:ns ## COG: SP2136 COG5263 # Protein_GI_number: 15901950 # Func_class: R General function prediction only # Function: FOG: Glucan-binding domain (YG repeat) # Organism: Streptococcus pneumoniae TIGR4 # 291 442 472 617 621 106 39.0 9e-23 MKKQWQMQVHPVDGKEMRQEKRELRVLELAERSILFLLLLWIFVFSLSERARAAESSVIE SVDISFQSDFGGQEEIQSPNITVQQNDVEIADIHYIKSYDAWVPGQKLRVEILLKAKDGK VFARSLNRDKVKVNGANYVEAGERKGNQLMVKADFIPKMALGNVQYAAWNAAHTMGIWQK VRFAPSYTVTLYGDNQLVKEYTGVKTTYVDFAQDMKDLSKVYYYEVKAAPFTEEEKKYFK EGQFVTATTDEVEEPKGDKPADLDEEDNIEAYIAAGNGVLPNAWRYVGRHWYFIDAQGKV KKGWLERGGEWFFLNNRSGVMETGLVETSTGKFAYFKQDGTMISNTWLQTGPDVWYYFGL DGYMYYGWWKNSDGNWFYLNQSLGGKMQIGWLKWNEKWYYMDKNGVMQTGFRVINGKTYY FNESGEMLTNTTVQGKRLGADGAAA >gi|333758476|gb|AFIH01000001.1| GENE 664 614758 - 615651 888 297 aa, chain + ## HITS:1 COG:BS_yomI_3 KEGG:ns NR:ns ## COG: BS_yomI_3 COG0741 # Protein_GI_number: 16079194 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Bacillus subtilis # 23 186 76 240 240 132 46.0 1e-30 MANAVSIQNGIQGVLSGVRNNALQTTTQGASGTSFQNVLTSVAQGARKTAALPKGAAQYE AIFDEASRTYGVSKSLLLAVAKQESNFNANSVSHAGAQGIMQLMPGTAKTLGVKNAFDPY ENIMGGAKLLRDNIKSFGSVPLALAAYNAGPGAVKKYGGVPPYKETQDYVKKIMADLGDS ANRVQSHFAYKGESTSSSGSTVGAATTALGLNSGDFGISANSSLLSILGGAGGNSLLLSG LMQSLLTGGIAKGQAREAAAGDGDPSTVTIDKQSFQSLLSLLQMQMMMPSRIGEIGE >gi|333758476|gb|AFIH01000001.1| GENE 665 615741 - 616370 427 209 aa, chain + ## HITS:1 COG:no KEGG:Closa_3420 NR:ns ## KEGG: Closa_3420 # Name: not_defined # Def: type IV pilus assembly PilZ # Organism: C.saccharolyticum # Pathway: not_defined # 5 207 4 213 215 68 28.0 1e-10 MVLRDCKKGMVHWPEGDRNIPVLVEKNGDEILLYFKGYKFQDTRFVSEIDFYDLQKGMIV TLAEVVMRKNPAFPESPYPWIGVCDIREVLRIVQRQNDVRVSVAMELPFVKEKEKDDEEE LHFFGIIRNLSAGGIFMETNVPLKEDDIVRFHYRFDKMDRELKLVVVWIKAGENGRYGYG LRFLRMSLGEESEVRNHVFRLIFKNNKKI >gi|333758476|gb|AFIH01000001.1| GENE 666 616383 - 616481 64 32 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKAKERELNKKAWKDRRFFHVFSVALASFWKR >gi|333758476|gb|AFIH01000001.1| GENE 667 616500 - 617765 1085 421 aa, chain + ## HITS:1 COG:lin0696 KEGG:ns NR:ns ## COG: lin0696 COG0463 # Protein_GI_number: 16799771 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Listeria innocua # 3 393 5 375 637 120 26.0 6e-27 MKISQAMIVKNEEKNIVQALSWGKGVVSEQIVVDTGSTDRTVEIAKSMGAKVYFFPWEDD FSKARNFAISKCKYPWIAMLDADEYFPEEDAKKIKYYIGLIDDNPKVHGILTAIANLGEN GQVESVDNTIRLFRNRKDIFYRRAIHEQLTLAGGEDFFSANCNKDLTVIHTGYQSAVFTE KIQSNRNLNILKKELEKNPEDFEMHIYTGIEYSLRKMWKEALEHYRKVYPNMPKDYENYK IILSMGMAEHLNALHQWSVEDKSKMEELTQEAEELVDLGRKIIPEDADYLYQLSIMHYLN HRYDKVIPLLLEALKKTEDVGEGTVSQRFLAGIISAYGMLADSYMNTGNYREAVHYATVV LKEKPQEVEILRILLFTFYLSHTPWEEVRQFLQPMYGEAMSSVEALANKLGYDTASSQES R >gi|333758476|gb|AFIH01000001.1| GENE 668 617798 - 618346 467 182 aa, chain + ## HITS:1 COG:SP1274 KEGG:ns NR:ns ## COG: SP1274 COG3475 # Protein_GI_number: 15901134 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: LPS biosynthesis protein # Organism: Streptococcus pneumoniae TIGR4 # 30 182 13 160 269 67 29.0 1e-11 MKRLKKEFFYDEIRDGFYIPGLIKRAWGAQLIVLSEIDRICKKYDIAYFLYGGTLLGAVR DGQCIPWDDDLDICMLRDDFFKFAEVVKKELPEELTFNSLVNNQDSAELVAAVGTAIVEI RPEIREKYYEFLYPVSVDIFPLDDLAKDPEDEEYRKDVLRLLFVMLIFIEQKKKIQRSLK KK >gi|333758476|gb|AFIH01000001.1| GENE 669 618460 - 619749 900 429 aa, chain + ## HITS:1 COG:no KEGG:EUBELI_00243 NR:ns ## KEGG: EUBELI_00243 # Name: not_defined # Def: lipopolysaccharide cholinephosphotransferase # Organism: E.eligens # Pathway: not_defined # 7 427 235 636 748 150 27.0 8e-35 MVSYLPDQLKDEKNYYLKTIMQPGKTLSFCGTKLPVPGDCDAVLQGIYGDYHKKVKAGGD HGYPYFKKNEKLLKETFKENWLQDYAFKEKDLERPEVYSFRDIVLKTAEYFIASQKKSFE AFVRGDFSMVLALLSKAQEEAITLGNTIEQKKGTGTESVSYIEEYCEALYHAYQSISELL AIEENPMENLSSALRKDLERKLKKPGYYLRKLHSALEKEFKRQVVFLPHSAKHFDSLRPL IDSLLKAEDVECTIIPIPYFDRLGLGEFSDMHYEGENFPKGYNMTDYRSYDFAKELPDCI VINSPYDEFNHVWSVDPFFYSREMKNYTKRLVYIPWFITDEIDPEDKEDGKAFSNMEYYV TVPGVFHADLTIVQSEQMRKAYLEKIAQFAGRGISRKMSKKISGAGSCLLGEKEGQGTIA QFRRFLFKK >gi|333758476|gb|AFIH01000001.1| GENE 670 619762 - 621714 1678 650 aa, chain + ## HITS:1 COG:SP1273 KEGG:ns NR:ns ## COG: SP1273 COG3475 # Protein_GI_number: 15901133 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: LPS biosynthesis protein # Organism: Streptococcus pneumoniae TIGR4 # 30 270 14 245 267 87 29.0 9e-17 MKLPRDFFYDEVRDGFYIPGMVKRAWGAALTILSEIDRICKKHGIQYHISAGTLLGAVRE GAFIPWDDDLDIIMLRDEFNKFWSVAKVELPKELTFTFDIGHMDRSGYLAAVGISEMYFR PEILRKYCEYPYPAAIDVFILDDLAKNPEDEEFRKDVLHILYTMIGLVESNKEKSRSFLK ELEKVEELLEIQFDRNSPLAPQLYDVFHRVCQEFNGTGDMVAFLAYQMHHEKTKFPKAAF QGSKQILFCNREFPAPIDYDTVLKVIYGDYKKPVKAGGIHNYPYFRQYEERLQKLFGEKW VFSYQFKEEDLERPNVENFREILFKTVDYFLERQKKILEACKKKDFLFLHTVLPACQEEA IALGNAIEAKKGEGCESVSLLEQYCESLYHAYQALEEVLHSDEKEIDRVLSESGMQVERM LKQSGSHLRKLRQALEGEFKRQIVFLPHSAKHFDSLRPLIDALCAEDDVECKIIPIPYFD RLGDGNFSEMHYEGNEFPVGYEITDYRTYDFATELPDCIVLNSPYDEVNPVWSVDSFFYS RKMKNYTRKLVYIPPFITDEINPKAEEDGKAFGNMEYYVTVPGVFHADLTIVQSEGMKKA YLAKIARFAKGGVSKKMRKKISGAGSCLFGEKKGQGTKEVLEEFKSFLQK >gi|333758476|gb|AFIH01000001.1| GENE 671 621736 - 623838 1075 700 aa, chain + ## HITS:1 COG:no KEGG:DSY3019 NR:ns ## KEGG: DSY3019 # Name: not_defined # Def: hypothetical protein # Organism: D.hafniense # Pathway: not_defined # 61 428 16 402 803 176 31.0 4e-42 MRKKKKEQIISLLQCYREAHSAIRKGIEEGRGEEAISLLVLCQEGMEKIERDTEQEPCGK TEREALFSSYQEALYSCYLSLIKTEEENAEPGTSCLDRAEAYFSKIEEEIASIPVKTLHL FLPYKASMWDSMESVYFAALQDSSCEALVMPITYYEKEDGKFGKRINERAEFPSEIETID EGFSLEEAQPDVIYIHNPYDDKNILTSVDPRYYSFHLKDYTENLVYIPYYTTMGKAGFGS LFMPAYRYVHHIVVQSEEHKQRLPKEVQEKARILGSPKLDRTLAYSQNPPKIPEDWKRIA RGRKIYYYNTVIEEMLGHPESFLQKMEEVFSLFKENPKYCLLWRPHPLLESSFFSVDTAY RKRFLELKLRYLTEEIGIYDSSAEPERAVALSSVYLGDETSSMAALFLAGGKPLFILDST VSEERRQEERNQGERNREKRLTAYFLRLFRRMKRQSFALSGKKESEEALVYEGRFLLMGQ LEGDRLRIRKLALSEWGIPEQESMSVSAREYMPVPADEYGEAYFYEGRWILTPRAGNHFL ILEKGKEPKKLPLPEGGCKPDAFSGSYRGGEYLFCKAENYPFDIRFSLKTHGIKELKEGI LHEEEGREVFLEKGEEIEHVEFLFPAEELISGFLPWRSFSYGLQETALYSLSDYLEERPL LYAFDEDDSKRKLEELSVHVGSSGKAIYAFFQAMLNGKEE >gi|333758476|gb|AFIH01000001.1| GENE 672 623875 - 625905 1200 676 aa, chain + ## HITS:1 COG:SP1273 KEGG:ns NR:ns ## COG: SP1273 COG3475 # Protein_GI_number: 15901133 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: LPS biosynthesis protein # Organism: Streptococcus pneumoniae TIGR4 # 31 272 14 245 267 107 30.0 8e-23 MMELKREFFYEEVQDGFYVPSIMKRAWGAGLTILSEIDRICRKYEIPYYAGYGTLLGAVR SSSFIPWDDDIDLMMLRSDYNRFLSVAEKELPEELALASLETNPDFWGMNPHVCSAVLCF HPKLSSKYREFPYHAFVDIFPLDELAEDPEEERQRENKVHLLFQMMKKVEGREGEPEKWE EELKEIEKFFSVRLDRSQSILTQLIGVMDRVVYQEFNGRGGSTLTFMPLYMMRKDRYPRE VFEKREWVPFCNISLPIPAGYDRLLQCTYGNYHKKVKAGGEHDYPYFKERERELAEMLGK ERFFNYAFKKEDLERPKVQSFRNLTFLTADYLLEKSKSLVEQIQRGNTSLALSELPLLQE TAISLGTAIEQKKGKEKESVSILERYCEALYEAYLSLQEGLSGDVSGELVAEQLATEQLI KAGNCLKDLKEVLERDCKRQVVFLPHSAKHFASLRPLIDALQEREDTEVKLMPIPYFDRL GDGSLSEMHYEGEDFPKEYPITDYRSYNFAAELPDCIVTNSPYDAFNPVWSVDPFFYSDK LKQYTNKLVYIPDFVTDEIDPQLEEDGKAFYNMRYYVTVPGVFHADYTIVQSEAMRKAYL EKISRFLEEEEDLEEKAGNKGRLQRKEACLKERSIDELMQMMQKKILGAGSCLLGEKEGQ GTKEVVEAFRKIWEEL >gi|333758476|gb|AFIH01000001.1| GENE 673 625952 - 627931 1000 659 aa, chain + ## HITS:1 COG:L15884 KEGG:ns NR:ns ## COG: L15884 COG3475 # Protein_GI_number: 15672196 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: LPS biosynthesis protein # Organism: Lactococcus lactis # 27 287 11 269 278 85 28.0 4e-16 MQWEKDFFYDEVRGGFYIPGMMKRAWGAELSVLKEIDKICRKHRIPYFLSSGTLLGAVRE GGQFIPWDDDVDIEMFRKDYMKFLRVAKEELPEELYIRAIEVNIETASFVPKVGLREDVM SLPTLEKYCFFPYKVEIDIFLLDELSDKEEEELYREEVLTMLYSLNDMVFEGTSREDVEL LLEKIEEALHFHFDRNLSLNLQIKSLINRFFQEFNETEGHNIAIFPYYHLLGNCRFPRKA YENTILLPFCGMRFPAAEGYEMRLDSEYGDWHKKSKSGEDHNYPCYKESEEHVSRILPAK AFPRYSFQKESMERNLVRSLRKQYLGILDGFFLEERRGTELLQKGEYAAYQSLLAALQEG AIAFGELLGEKIGKDAESISLLESYCEMLYQRYQNASSPEEKKKEIMQEEETVSLLKALK ERVGKELKVQAVFLLHRAKDFAGLRPLVDALRKENVDCKIIPIPYYDKAVNGAFREVHYE GGEFPKEYAITDYKSYDFEKELPDCIVMNSPYDEYNPVFSIESAFYSRNLKRFTGKLIYI PWFVTDEIDPENPEDGKAFYNMRYYVTVPGVFHADYTIVQSEGMKKAYLVKILQFLEEEE KLHGTLGIEGADESGKKSIDEVLVIMLKKILGAGSCLLGEKEGQGTKEVVSCFLRLLSQ >gi|333758476|gb|AFIH01000001.1| GENE 674 628068 - 630056 1128 662 aa, chain + ## HITS:1 COG:SP1274 KEGG:ns NR:ns ## COG: SP1274 COG3475 # Protein_GI_number: 15901134 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: LPS biosynthesis protein # Organism: Streptococcus pneumoniae TIGR4 # 1 60 14 73 269 72 51.0 2e-12 MRILFEIDRICKKYDIPYFISEGTLLGAVREGNFIPWDDDIDIVMLRDSFSQFSKVVEDE LPEGLKFSFGRDGLQNTSIYAGIGIFEMKFRKEILHEFCEFPYPAIVDIFVQDDLAKDAE LENARHEILKMLCVMIQNLEQGKEEEKTAQKKLKAIEKLLPTHFTKEEKLLPQLYRVFHQ ICQKYNGEGEEVAILPYQLFHPEAKYPKAVFRGTETLLFCGNTFPVPKDYDIVLKGSFGD YRKVVKAGGDHVYPYYKKYEKKLRAILKDNWFFDYVFQEKDLERPRVENFREITMQFLDS FVLEEEELEKTFSERKYEAVLSALPSLQERAVMLGNAIEERKGEGTESVHCLESFCEALF QLHSSLTALLVYRDTAEGKENELEEKIEQSEKNLKQSTIVENSKEQLEGLRALLQNLRAS LEKEIKRQVVFLSHSAKHFASIRPLIDALREREDTEVKLMPIPYFDRLGDGSLSEMHYEG ENFPKEYPITDYRSYNFAAELPDCIVMNLSYDAFNSVWSVDPFFYSDKLKQYTNKLVYIP WFVTDEIDPQAEEDGKAFYNMRYYVTVPGIFHADYTIVQSEGMRKAYLEKISRFLEGKED LEEKAGNTNRIQKEEALLTRKEVLEQMEKKILGAGSCLLGEKGGQGTKEVITIMKQILFE KE >gi|333758476|gb|AFIH01000001.1| GENE 675 630145 - 632169 1154 674 aa, chain + ## HITS:1 COG:no KEGG:DSY3019 NR:ns ## KEGG: DSY3019 # Name: not_defined # Def: hypothetical protein # Organism: D.hafniense # Pathway: not_defined # 44 433 6 410 803 198 32.0 6e-49 MRKRKKEQLLSLLQSYEEVHSTLRSFIAEGREKEATSLLVLCQEGMEKIEGEVQANLAEA GGLTELFLQYQEALFHTYQALSTAESEMDFLQKAESVYFQIKDVIERTAVHSLILFLPYK ASMWDSMESIYLAARKDSSCEALVMPISYIERAEGGSFGEAQNEREKFPAHIPLITEDFS IEEERPDLIYIHNPYDDANLVTSVHPRYYSSNLKKYTDNLVYVPYFTTMGILSHGAAFRP AFQNVDYIVAQSEEHKKSLPKEVEKKCVILGSPKFDSILSAVNHPPKMPEEWESIAKGRD LYYYNTSLVGMLENTEAFLEKMEEVFSLFKDHPKHCLLWRPHPLLENTFLTMRKDYQSHF LCLKEKFLKEEIGIYDNSPELERAVSLSELYIGDDGTSLISLFSVAEKPVIILDNNLPSK RNEESYKTLLEYFLLRKAREERCYGEDALVYEGRFLLVGQLEEKKLSIKKIDLSEWGISE EESDRIPGDEYGEAYFDHGRWILSPKAGNHFLILEKGKPKQRIYLSGFSYKPDAFFESNR VEDYIFCRAENYPNDIRFSLKTLCIEELKGQKIEERQVYHIAEHVLESWDIQFTFPVEEL CSGFLPWRRFSYGLRENEAYCLQDFLSDKPLPRPFDKAFSHSKIKDIAVNIGTAGEKIHA YFQRIALQDEKIGK >gi|333758476|gb|AFIH01000001.1| GENE 676 632189 - 634219 1932 676 aa, chain + ## HITS:1 COG:mlr5882 KEGG:ns NR:ns ## COG: mlr5882 COG2513 # Protein_GI_number: 13474899 # Func_class: G Carbohydrate transport and metabolism # Function: PEP phosphonomutase and related enzymes # Organism: Mesorhizobium loti # 389 672 11 281 302 134 32.0 9e-31 MKALILNSGKGSRMGDLTKNHPKCMTEIASMETILSRQLRQIEDYGIKEVVITTGPFEDK LIHYVESLGLDLEYSFVRNPLFAETNYIYSIYLAREVLKDTDLLLMHGDLVVENDVFFDF MEQEGSLMAGSTTKELPEKDFKAEVSDGKITKVGVYCFEHAFSAQPLYKLKKEDWGLWLS AICAFCEREDEGETNWKKLYAEEALNTVLSQFSLRLYDAEEKLCQEVDNPEDLTVVSLLL RAIKKKTVYLSFSTDILHNGHFTLIKKAKRLGRLIVGVLSDEVVSSYKRFPLLPFSERKA MFENIAGVDRVVEQNSLSYRENLEKYKPDFVVHGDDWQTGFQKPIREEVCNILASYGGKL VELPYNNNEKYRDLEKRTRADLAMPDFRRGRLRKELKVKGFVNAMEAHDGLTGLIVENTK VYKDGGAHQFDAMWISSLCDSTAKGKPDIELVDMSSRFRTIEDITEVTTKPIIFDGDTGG IKEHFVYTVRSLERLGVSMVIIEDKTGLKKNSLFGTEVEQTQDRIESFSEKIRAGKKAQR TKEFMICARIESLILERGMEDALERAFAFVKAGADAIMIHSRKKSPEEIFTFVERFRKED SETYIVVVPTSFNSVKEEEFKKRGVNVVIYANQLMRATVPAIQNAAETILQNERAEECDS FLMPFKEIIRLIPEED >gi|333758476|gb|AFIH01000001.1| GENE 677 634406 - 635569 1065 387 aa, chain + ## HITS:1 COG:PM1453_2 KEGG:ns NR:ns ## COG: PM1453_2 COG1454 # Protein_GI_number: 15603318 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Pasteurella multocida # 59 276 59 291 414 114 31.0 3e-25 MRKDVIEAQIVLGKGNVKRELGDFIRRNAWKKIFLVAGKSFSGLAIGKEFAELEQELSLT VERFSAFSVNPEFSEAVAGSKVFRSFSPDVIFAVGGGSAMDTAKAIKLFSSLEEEELLLK PWKDNGIPLLAIPTTAGTGSECTPFSVLYKGGEKLSIEDESIYPLIRVEDARSLEFLPLY QKKVTLLDALSHAMESIWSRASEGDNLYYGKEAIDGILRHADAYLKNDPGSWAPISDAAT LAGKAIAITKTTGGHALSYKLGSLFSLPHGLATAIVNKELYPLLTENEERVHDPEKLVYL AHCFGVKSTQEGAERYRAFLEKVDVLPKDQGFYVERLREKSPDVQSLEEAVEILAKSVNL ERLQNHPMSLSEEELKQIYRRILMLEG >gi|333758476|gb|AFIH01000001.1| GENE 678 635582 - 636691 1094 369 aa, chain + ## HITS:1 COG:MJ0256 KEGG:ns NR:ns ## COG: MJ0256 COG0028 # Protein_GI_number: 15669880 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Methanococcus jannaschii # 183 329 5 150 188 90 36.0 5e-18 MKVEEFLERIPSDFFTGVPDSQLKALCDSLMERYGISERHIIAANEGNAVGLAAGHFLAT KKVPTVYMQNSGQGNAMNPLASLCAKSVYAIPMLLIIGYRGEPGVKDEPQHVFQGEITLS FLDLMRIPYFVLGKESTKEELEEACKRFEDVFAEGRQAAIVVKKGALTKEKSYPYRNSYS FCREDAIRCVLSYSGQNPIVSTTGKISREVYEIRDAEGQGHGLDFLTVGSMGHASSIALG IALEKKDKRIFCLDGDGAALMHMGAMATIGSVSPKNFVHILFNNEAHETVGGQPTVSKTV HYRELAKAVGYRKVYLAKEKAALENALSESGKETGPIFIEVACSVFSRADLGRPKTTAIE NKEAFMEEL >gi|333758476|gb|AFIH01000001.1| GENE 679 637410 - 637841 389 143 aa, chain + ## HITS:1 COG:CAC2230 KEGG:ns NR:ns ## COG: CAC2230 COG2340 # Protein_GI_number: 15895498 # Func_class: S Function unknown # Function: Uncharacterized protein with SCP/PR1 domains # Organism: Clostridium acetobutylicum # 36 141 59 172 175 63 34.0 2e-10 MKKVVKLVLLTALFATFFAMTAFAAKGDAQAAFNKVNEIRVANGLNPLTWNYQVENAAKV RANEIVSSFSHTRPDGRPWYTADDKVLYGENLAQYYDSSDEVVQAWMNSPSHRANILKPD FKSGAIFTVEVDGEVYWAEEFGI >gi|333758476|gb|AFIH01000001.1| GENE 680 638022 - 638237 216 71 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227873567|ref|ZP_03991809.1| ## NR: gi|227873567|ref|ZP_03991809.1| hypothetical protein HMPREF6123_1748 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_1748 [Oribacterium sinus F0268] # 1 52 1 52 64 74 71.0 2e-12 MEEKEVRGSTFIVQIKCMENDTWQGKVIWAEKNRAQYFRSSLELLKLMDRALLDETLSLE DGDEEDGEVVS >gi|333758476|gb|AFIH01000001.1| GENE 681 638218 - 638679 242 153 aa, chain + ## HITS:1 COG:no KEGG:bpr_I2507 NR:ns ## KEGG: bpr_I2507 # Name: not_defined # Def: hypothetical protein # Organism: B.proteoclasticus # Pathway: not_defined # 1 153 1 156 156 86 31.0 4e-16 MEKSLAELYAIDLLGVLIMERVDGDFRGELIEQYSTKRVPFYGVLDLIKKMEMQYDTWDY PQTSSRDRSFRKRQKYVYPDRRGKKDFVDEVRTLTKHSILEERGKLATFFVHTKFRQHCT WQGEVYIGEKEKAFSFQSVLALLKIMERECPRE >gi|333758476|gb|AFIH01000001.1| GENE 682 638664 - 639473 483 269 aa, chain + ## HITS:1 COG:SP1241_1 KEGG:ns NR:ns ## COG: SP1241_1 COG0834 # Protein_GI_number: 15901102 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Streptococcus pneumoniae TIGR4 # 47 263 271 485 502 98 28.0 1e-20 MSERVESRGIEKIKRRLCKSVFCLFFLLLFACGKKPTGTISGREIRLSFDRDNYPFTAED EEGKAVGFEIELMERIAEKEGFTLKFLPKNQSALAPSVITGTSDMAIGGLSRIEDEEKRL GYSTSYLTVKLAVLLRKDRDNPAEKSLEDFRGKTVLVKEGSAAASFLEEKREEEGYYLSV VQSNEDFFSALEEEKTDAICDLRPALLKMREGDNSLEMLSLDKEEEISFIVSRGQNREIL RAFDRGFRKIKENGEFEALYRRYASYFSE >gi|333758476|gb|AFIH01000001.1| GENE 683 639660 - 641801 1800 713 aa, chain + ## HITS:1 COG:RSc1545 KEGG:ns NR:ns ## COG: RSc1545 COG5001 # Protein_GI_number: 17546264 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain # Organism: Ralstonia solanacearum # 8 421 327 754 776 174 28.0 6e-43 MSEEKNFLLPKWMEKKKQLKESQLDPLSKTIKNQPFRELAAEFLEEGQLLCYFNIVDFKL YNYRFGFEEGDLLLIQMAKILQSAFPHALITRMFADQYALLTTAEDCHNSLLKAHTEFEK LDLPMFLDFKVGIHVVSEKRNIINACDNAKTACDSIKKDRESFYRYYDEELSHMLLRQRF IVDNIEDAMKRGDIQVYYQPLIRALSKEVCGLEALVRWVDPQFGFISPGEFIPVLEEYHI IHLLDIHVVSLICQAFSNIREKGENMVPVSFNVSRMDFELCDIFAEIEKLVKEYDVPKEM LTMEITESVLNKNPALISNQIKRFHEAGYKVWMDDFGSGYSSLNILKDFDFDLLKIDMLL LQDFQEKSQKIVSSIVDMAKKIGIRTLAEGVETEEQLEFLREIGCEKLQGYYIGRPRPYE ESIAHCKEMGFRFETPGKRRYNDDLGNVNLLSGYAHIKQHAASEVGNYVEGIPLSIVEMV GDKLEFLYANKSFQQELSSVRGLSVKGTEEIINNKQEEMYKVVRRFFSNLSAGERETLDT IVGDTFFSIRGREISHIPGRNAYIVNLQVYQGDFLKLKQKKMIEKVKDLYKGYELVLLWS PRMGQTELLYLRAEGRMQCEEKDFLTCYARETFSKEEGKRFFQFLRQNSALKGEKAVKEK YFMGVDENGRKIVLLVSLKASMLDEEEKILLSIRRLWNAQVASLVAGKLGEGL >gi|333758476|gb|AFIH01000001.1| GENE 684 642194 - 642514 367 106 aa, chain + ## HITS:1 COG:no KEGG:Closa_3470 NR:ns ## KEGG: Closa_3470 # Name: not_defined # Def: flagellar hook-basal body complex protein FliE # Organism: C.saccharolyticum # Pathway: Flagellar assembly [PATH:csh02040] # 6 106 5 103 103 82 45.0 6e-15 MENIAFIQPMTSWKLGNIGDTTAVERGLTGTENGSLFRDVFKSAIDNVKTTQLDVENKQY LLATGQLSDAHSLPIAEAKAQISLDLLVTLRNKALESYNDLMKISL >gi|333758476|gb|AFIH01000001.1| GENE 685 642539 - 644203 1623 554 aa, chain + ## HITS:1 COG:STM1969 KEGG:ns NR:ns ## COG: STM1969 COG1766 # Protein_GI_number: 16765307 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis/type III secretory pathway lipoprotein # Organism: Salmonella typhimurium LT2 # 44 542 50 560 560 111 25.0 3e-24 MQKLKEMWQNLSQKSKKLLGIIAAVTLLVIVVAVVLIAKGQKTEYQTLFSSLSQSEAQQV VSLLQEQNVPYLYDGKSGSLKVPSQSVDTLRAQLLSKGYPKSGFAYNMYIGNSGLMTTES DKKQYTLYDLQDRLGATIRLFDGVRDAKVTIAEGTEQNYAIESDNPIQASASVVVTMDEG QTLSEKNAEAIKNLVARSVKGMNFTKVSVFDAGTMEEVAADAEDGASGSGTSMANLTATV ENNIATNIKRVLGKIYGGENLAVSVKGTLNMAKLVQENTQYSVPEKTEATDKTGLLKNEE VAGENAGSSGENAAGVAGADANADTPRYTTQNGNNTTVDGYANSSATREWLYNVLKEQKE ISPGVLEDATVAIVINTDDKSIPDGDLINLVADAAGINREDAENKITILRSLNKTNVQKT EEEPLPEEPKTVLERFPLWALIGAGVSAFLLILILLILILRAKKKKKQKKLMEEEMANQE ALSVKPSDEIAPIDDTPDEYELNAEGRMIHGMKLKKSIGEFADQNPQVVAKLIQSWMREE EQNLGRKQHRSTRK >gi|333758476|gb|AFIH01000001.1| GENE 686 644169 - 645248 1097 359 aa, chain + ## HITS:1 COG:BH2457 KEGG:ns NR:ns ## COG: BH2457 COG1536 # Protein_GI_number: 15615020 # Func_class: N Cell motility # Function: Flagellar motor switch protein # Organism: Bacillus halodurans # 28 358 6 335 335 294 48.0 2e-79 MAENSTEVQESKVKTNANPEGAEPHHSLSGKQKAALVVVSLGAERASQIYKYLGERDIEE LTFEVAKMGKTTNSMVETTLEQFYRLCLTHKMMTDGGMDYARAVLEKAFGETAAKSLLDR VSHTLASKPFNFFSKGDPKALLSLLQNERPQVIALILSYMDAEQAAQVLENLAEAKRIPT VVAMAKMDRVSPEAISIVEDEMKRKFDTIITSEDNMNLGGIDFVADVMNHIDRSNEKKIF DELDVTDPDLSADIKDKMFVFEDILTMDDRSVQRFIRDCDSKDIVFALKTASEEMKQIFF NNMSKRMAETVHSDMEVSRNIRLKDVEEAQQRIVNLIRTLEDQGEVIINKGGDEDNVLV >gi|333758476|gb|AFIH01000001.1| GENE 687 645235 - 646041 1000 268 aa, chain + ## HITS:1 COG:no KEGG:Closa_3467 NR:ns ## KEGG: Closa_3467 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: Flagellar assembly [PATH:csh02040] # 54 256 49 250 258 124 38.0 5e-27 MSSSRKIIRSASNKELSNYLGSFDEEKPVTEETPEDFFQEEESGQEEDYLVLPEKKEEDP YHETLLHLALEKAQRIIDTAEKEAQRIKEDAKEDGYKEGFREGYEKGKEEAEERILSEHA EELDDFRQELNRTLRTVEDAKTERLYRYMDELKDVAIAVAEKVIYVSLRSSGEVIRRMIL KEAERIKKTAWLKIHIDRLDYEMLVETDADVASELSQVSDNIKFVIVEKEEPGTLILETQ EEIVDAGIGTQMENLRERLGHLDTQESV >gi|333758476|gb|AFIH01000001.1| GENE 688 646045 - 647355 1242 436 aa, chain + ## HITS:1 COG:BH2455 KEGG:ns NR:ns ## COG: BH2455 COG1157 # Protein_GI_number: 15615018 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis/type III secretory pathway ATPase # Organism: Bacillus halodurans # 4 429 5 429 437 453 53.0 1e-127 MYENVLSTIKKMDPVENIGKIENIVGMSMEASGTGKSSIGDICMIYSDETESQVAAEVVG FKGDRVQLMTYKSAMGITSGAFVRNTRRRLRVPVGDFLKGRIIDAQGVPMDGGEPFPDSE YYTVNNAYMNPLDRPPIRERLHFGIKAIDGLNTVGKGQRIGIFAGSGVGKSTLMGMIARN VKTDINVIALVGERGREILEFVEKDMGEEGMKRTVLVVATSDQPAMLRLKAPLVATTIAE YFRDKGMDVLLMMDSLTRFAMAQREIGLATGEPPIARGYTPSIYAEFPRLLERAGAFKKG SITGVYTVLVEGDDTNEPIADTVRGILDGHIVLSRQLAAENHYPAIDIGMSISRLMNELV SEEHKKSASRIRNTLGLYRKNSDLISIGAYKKGSDPKLDEAIEKYPLINEFLKQKVEESF SYEETVIKMEEITDIS >gi|333758476|gb|AFIH01000001.1| GENE 689 647393 - 647698 288 101 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227873549|ref|ZP_03991792.1| ## NR: gi|227873549|ref|ZP_03991792.1| hypothetical protein HMPREF6123_1731 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_1731 [Oribacterium sinus F0268] # 1 101 1 101 135 85 64.0 1e-15 MKKFSYSLEAVYQFKQKILDKLKKEYAVKLQDVQIQQRLLEDLRKELHHYEEEFEVVKRE GCSIENMMIYVRGLERMEKRIKKEEDELTRLTILAEEKRKK >gi|333758476|gb|AFIH01000001.1| GENE 690 647710 - 647829 170 39 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDTKAFEKLKEKKLEEYHVLGQKVEEAFIEEFVSHARKA >gi|333758476|gb|AFIH01000001.1| GENE 691 647861 - 649072 1047 403 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227873547|ref|ZP_03991791.1| ## NR: gi|227873547|ref|ZP_03991791.1| conserved hypothetical protein [Oribacterium sinus F0268] conserved hypothetical protein [Oribacterium sinus F0268] # 14 403 21 431 431 135 37.0 4e-30 MLNKEISAGKSSLIQQNSVYSSGKENRKTEDGGNTPLDFSKVLRASKEEEEKKEEVRTEK DDKKGSVENKKDENSGKVKKPDEKKTEEKKTESKKEASEDGKMATLLTENSFLIQRDQLK VELQAKTEEGEALSVAAVQESGEKLPEVLATEEISQPEIKELAAPATKAAAAETVLPKEE KAEEQETVFSAVITEKHPLQEEETTVKDEVETKSVKKSGERVARPDLKKEELAPEHAVKP ESLFRKEPESSPVQKAEEPLRLYTKEESIPEDVAKFLGEQIDFSKGEIKIELEPRTLGQI TVKVNFSAGKANLVILAENPKTLSLLQNGALDMARILEQKTGEVTKVVVHEETKGENLFQ ENPSHNNGENKDEAERRLREELEERRRGNTEGFIHRMRLGLSE >gi|333758476|gb|AFIH01000001.1| GENE 692 649082 - 649903 986 273 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|291562026|emb|CBL40842.1| ## NR: gi|291562026|emb|CBL40842.1| Flagellar hook capping protein [butyrate-producing bacterium SS3/4] # 1 151 1 148 189 105 50.0 3e-21 MADIRGVSSATSPYEAGSYTAKSNAKNTLTIESYFKLLSAQLAHQDMTNPMDNSEMMAQM TQMAMVQSLGTMTSNMKEEMALTKTTYLAGLIGKDVTVKVPDADKNPDPNAPKEKSGIIA SVNMKGTEATFRIEGDTTEYPLESLLQIGKLSTGTATTAATALNATGTQGTAVGASTAGA QASHGTTATAGAQASHGTTSTAAGNTATPLSAGGAATSSPAGASATSAIGAQTAPGASAN SGAQSTTEVGPGVGLQSNAVTGTSGSPSTSTSS >gi|333758476|gb|AFIH01000001.1| GENE 693 650057 - 651076 1047 339 aa, chain + ## HITS:1 COG:BS_flgE KEGG:ns NR:ns ## COG: BS_flgE COG4786 # Protein_GI_number: 16078692 # Func_class: N Cell motility # Function: Flagellar basal body rod protein # Organism: Bacillus subtilis # 1 339 1 264 264 140 35.0 5e-33 MLRAMDSAVAGLRAHQNKLDVIGNNIANVNTFGFKAQTYSFKDAMYQTSSTSSGGKQEAT GNATIGGANPAQYGYGSLTGSIATDYTSSTPSYVGGFNASINGSGFFVTSASNKSIELDP ANTKTTTAEMKKNNFAYTRVGQFSVDANGYIVDANHNFVYGFQPDSLTEPTKYGDGGKKL VPLRAPAADNAGTVTLTGTPVFTGFAAQLKSVEIGEDGIVKGIIDNKTPGVGGAAAQVTS VSVVLGKVAVATFQNQEGLTKAGNNTFNAGVGDNTGYISATMPGEGSTPTLMAGYLEASN VDLAKEFSDMITAQRGFQANSKIITVSDEVLQELVNMKR >gi|333758476|gb|AFIH01000001.1| GENE 694 651219 - 651455 239 78 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227873543|ref|ZP_03991788.1| ## NR: gi|227873543|ref|ZP_03991788.1| hypothetical protein HMPREF6123_1727 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_1727 [Oribacterium sinus F0268] # 1 78 1 78 81 123 80.0 4e-27 MIRLTKLNGEEIFLNYFQVLYIRQIPETKIKLANGDFYLVRDSVESIVKQVQEFLGNCFT FQNKLHTGEDVYEIKGKE >gi|333758476|gb|AFIH01000001.1| GENE 695 651498 - 652307 904 269 aa, chain + ## HITS:1 COG:BB0281 KEGG:ns NR:ns ## COG: BB0281 COG1291 # Protein_GI_number: 15594626 # Func_class: N Cell motility # Function: Flagellar motor component # Organism: Borrelia burgdorferi # 1 263 1 259 260 175 36.0 1e-43 MDLTMLIGWILAAILIVNGIGVDKLGNFWDVPSVLIVIGGTIAGLVACYPFRILKEVPKH IAICLRGGKKYNIPKTVDAIVDLALIARQSGLLALEEKAEEIKEPFFKQAVVMIVDANDP DKVRAALERQVEDMMTRHEEAKGLYVKGSALAPAFGMIGTLVGLINMLKGMDLSGSGGSS TLGQDMGVALITTFYGSSLSNVIFHPIAQKLTIRDNEEVLYCQVIIEGVIAIQSGDNPKV IRERLLASLDQKQQKKLLAKAGAGGGGDK >gi|333758476|gb|AFIH01000001.1| GENE 696 652307 - 653281 789 324 aa, chain + ## HITS:1 COG:aq_1001 KEGG:ns NR:ns ## COG: aq_1001 COG1360 # Protein_GI_number: 15606304 # Func_class: N Cell motility # Function: Flagellar motor protein # Organism: Aquifex aeolicus # 13 238 14 215 224 84 29.0 3e-16 MKKRGGGGDEGGSWMDTYGDLVTLLLTFFVLLYSMSSLDQAKWDVFVRSIFPNGRPGEES AEQIVLNGQVTNEDGKGSVGDGSVPPNEVNLNDPKELYLQIAKALNDAGISGVEVSRGED YTFVVFKDKAFFNGDSSVITPQGQETLTVFCNALADQANEISQVNIMGHTAQGDPNRANN PRNDRMLSVMRAAEVCLFIQGRGIISPDKLVSIGYGQFHPIAENDSSEGRAKNRRVEILL IDQGAQIRGLDEYFQEYYSGKNSDKTIVTDGVPENIQAEQNGQAPQEVAGEGNAEAVPAE QPQAVPAEQPQAETVDAGATSASE >gi|333758476|gb|AFIH01000001.1| GENE 697 653363 - 654550 1191 395 aa, chain + ## HITS:1 COG:CAC2216 KEGG:ns NR:ns ## COG: CAC2216 COG1868 # Protein_GI_number: 15895484 # Func_class: N Cell motility # Function: Flagellar motor switch protein # Organism: Clostridium acetobutylicum # 1 345 1 323 331 129 28.0 7e-30 MADVLSQSQIDALLKSMQDGPPKEEKEEPKVVEVSVQESPKKEEAPAKEDNFSKYDFYSP RKFTKEKIRLLKSIFDNYARILTSQVNGIFRTMTDITVLELRETRYYEYVNAFHENDCMT IVETHVDGKGTSNVPLMSYISPGLTLTLVSHMLGGTDSVMKTDGDYRYTDVEMALYRRIM EYIVHALGDGFSNYINAEFKISKVETNPSMVQEVGLDETVVIVVLNVDISGLAMERIRIC LPGTLLEHMFKIIDNRKHLARGFAYENNQDVIMEHLRASEFPLTGQLGIVKLDIEDLYHL KVGDVIDLNKEKDSSVKLYVGRQPWFTGKMGVFKKNIAVRIEERIMQKEELPKDDTEGFT QSPDEPEEDEEFISNPGIDAEDLQELLDTDPSLDE >gi|333758476|gb|AFIH01000001.1| GENE 698 654625 - 654993 446 122 aa, chain + ## HITS:1 COG:BH2444 KEGG:ns NR:ns ## COG: BH2444 COG0784 # Protein_GI_number: 15615007 # Func_class: T Signal transduction mechanisms # Function: FOG: CheY-like receiver # Organism: Bacillus halodurans # 2 121 3 120 121 131 60.0 4e-31 MAKILLVDDAAFMRMMIKNSLTKGGFADSTFVEAQDGMEAVKKFEEENPDLVIMDITMPN MDGLQALKKIREAHPDAKVIMCTAMGQESMVVDAIKSGAKDFVVKPFNAERITSTVKTIL GV >gi|333758476|gb|AFIH01000001.1| GENE 699 655011 - 655460 333 149 aa, chain + ## HITS:1 COG:BS_flgC KEGG:ns NR:ns ## COG: BS_flgC COG1558 # Protein_GI_number: 16078682 # Func_class: N Cell motility # Function: Flagellar basal body rod protein # Organism: Bacillus subtilis # 1 149 1 150 150 125 49.0 2e-29 MSFLNSFDISASGLSAQRVRMDIAAENIANVDTTRTESGGAYKRKDVVLESYGDRSFQHA LRNAANGKGFRGQHAGVRVQGVITDDREMKRVYNPNHPDADADGYVNYPNVDVLKETIDS MSATRSYEANVTALNAMKTMAQRALDIGK >gi|333758476|gb|AFIH01000001.1| GENE 700 655513 - 656949 1691 478 aa, chain + ## HITS:1 COG:CAC2215_1 KEGG:ns NR:ns ## COG: CAC2215_1 COG1776 # Protein_GI_number: 15895483 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Chemotaxis protein CheC, inhibitor of MCP methylation # Organism: Clostridium acetobutylicum # 2 234 34 260 303 113 33.0 1e-24 MSATSFNEMEFDAIGEIMNISLGSSATAVSTLLGTKVNITTPIVQVLTKDDFDFQDLEPA VGVEISYVKGLSGKSVMLFSRNDVRVIVSMMMGAEIPEEEFVMDEINASAIREAMNQMMG ASATALSEFLGTTVDISTPISYEIDDGNAFKDKYFDGSEDSVVIRFTLEIEGKLSSEFIN IMSVDLVKRLLEPFKAQFGIEDDDDEYIPSEEPAAPVEAPQAEVQEAAPAESPAEAPQAA KSGPIDQAQADALLASLLQAQAEEGSAEAAQPVSSDNATPVENQPPKQEAQATPVQPTPE AAPAQPIPQAAPAPQAAAPAPQAIPQGMVMGGMMDPMTMQLITQMQQSQTQMMELMREMQ SGRSSKAAPAEPSIIKPLNSKEFLDDAEGKEENASNRELLMKVPLEISVEIGRTRKLVKD ILEFTQGSLVVLDKMAGEQADLYVNGECIAKGDIVVVEDNFGIRITEILKKDINEESL >gi|333758476|gb|AFIH01000001.1| GENE 701 656949 - 657383 410 144 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227873536|ref|ZP_03991781.1| ## NR: gi|227873536|ref|ZP_03991781.1| hypothetical protein HMPREF6123_1720 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_1720 [Oribacterium sinus F0268] # 1 110 1 110 140 119 64.0 7e-26 MFAEDSISLVSGFLLLCLFILGAWTLNRIIGKYGKHFQKGRYMKVVDLIQIAQDRQLFIL QLEKENRCLLLGSGPEGINLITELREEYEEVESVMKGRSIQDFIRSIGGKKEGDFSGIFQ SLNAKNADRVESEGSRISERSPDE >gi|333758476|gb|AFIH01000001.1| GENE 702 657376 - 658032 615 218 aa, chain + ## HITS:1 COG:CAC2150 KEGG:ns NR:ns ## COG: CAC2150 COG1338 # Protein_GI_number: 15895419 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis pathway, component FliP # Organism: Clostridium acetobutylicum # 29 217 71 259 261 187 54.0 1e-47 MNELLTGLNGGSVPTLELIYLLTLVALLPSIVIMMTSFTRIIIILSFTRNAMGVQQTPPN MVLAGIAFFLTLYIMSPTINKINQEAYEPYKKGTITQEQALERMGDDMKEFMLRNTEKKT LDRFVGMSKTELKNDPKDYPLTVVVPAFMTSELKRGFTAGFLIYLPFLLIDVVVSTTLMA MGMVMLPPAMVSMPFKLLLFITVDGWNLLFASMVNSFR >gi|333758476|gb|AFIH01000001.1| GENE 703 658133 - 658399 362 88 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227873534|ref|ZP_03991779.1| ## NR: gi|227873534|ref|ZP_03991779.1| flagellar biosynthesis protein FliQ [Oribacterium sinus F0268] flagellar biosynthesis protein FliQ [Oribacterium sinus F0268] # 1 88 1 88 88 89 82.0 8e-17 MLDSNQILDIMNQTFMLALRIALPFLLISMILGIVVAIFQAATSINEQTLSFVPKLIAIV ILLSVLGSTLLKTMQDFFVMILGLVAGG >gi|333758476|gb|AFIH01000001.1| GENE 704 658401 - 659153 592 250 aa, chain + ## HITS:1 COG:HP0173 KEGG:ns NR:ns ## COG: HP0173 COG1684 # Protein_GI_number: 15644802 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis pathway, component FliR # Organism: Helicobacter pylori 26695 # 5 246 16 254 255 83 28.0 3e-16 MFILFSFIVMRMSGAVAFNPIFGRVNYPARARAALILALSFFCYSYTGGKLNVVPSNFIE YGFLLLKELFVGFCLGFAMDLTFLSLRFATSVIDFSLGLSMAQVFDLQSSSQATVSTGLF YTFLLLIFLSVDGHLRFLEILFKTIDTNPFGEVSIRTLLMPKLILNLFVASMKMGLELAF PIMGIELMTEVALGILMRVIPQINIFQVNFQLKISLGFIMLYFLLVPISDKMNDIIRSAF DYLEQVMRLL >gi|333758476|gb|AFIH01000001.1| GENE 705 659281 - 660366 970 361 aa, chain + ## HITS:1 COG:BS_flhB KEGG:ns NR:ns ## COG: BS_flhB COG1377 # Protein_GI_number: 16078701 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis pathway, component FlhB # Organism: Bacillus subtilis # 4 347 12 358 360 240 38.0 3e-63 MADGDKTEAPSEKKRQDARKEGNVFQSADIVTVVVLFGVFYAVRFMIPFIYKDLRNFLSF ILELIQEREPVSSQIYYRFLWLLVKSALPLLLITMFLGTISSLVQTRFNISFKLVVPKFS KLSPARGFTKVFSKRNLVDLIKNIIKIVLLINFLYSILKADIIPIAKMLHMDIRNSSIAL MSMMFDLITRVCGVFLIIAIFDFMYQKWQYESDLKMTKQEVKDEYKQNEGNPEIKGRIRQ LMRSKANQRMMQSVPDADVIIRNPEHLAIAIKYDPDKNQAPVVLAKGQDELALKIIEVGE EHQITAVENRPLARAMYPLCKVGQEIPGDFYGAVAEILVYIYRKENRQDILDRAKEDNRN A >gi|333758476|gb|AFIH01000001.1| GENE 706 660359 - 662515 1914 718 aa, chain + ## HITS:1 COG:BH2438 KEGG:ns NR:ns ## COG: BH2438 COG1298 # Protein_GI_number: 15615001 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis pathway, component FlhA # Organism: Bacillus halodurans # 24 704 22 672 677 521 44.0 1e-147 MLKRLLQNSVVLFVLVIILLLIIPLPPALVDVAIVVNMAISMMILVITMTIREPLELSIF PSLLLITTLFRLGINVSTTRNILTRGGSSGAIIKAFGDFVVQGNVVVGLIIYLIIVLMQF IVITKGAERVSEVAARFKLDAMPGKQMAIDADLSSGMITEKQARERRQKIQTESDFYGSM DGATKIVKGDGVMSLITTAINLVGGSIIGIIQSGQPVATVLSTYSIATVGDGLVGQIPSL LISVSTGMIVTRAVSEGSLNEDVSKQFTAQPRAMLITGMAMMVLVLIPGMPILQIIPVAG GFIAAGYYLEKRIKEEPEQARNEGEGLLAAMDEEGQPAAAPAEGQKEEAPQSEEDFYKDV NNVYNLLQVEPIEMDFGYSLIPLADESVGGRLIQRIVIFRRQYAQDMGFVVPSIRLRDSS NLGTNEYSIKVKGEEIAKGEILTDYVLALEPDEVEDTIDGIETIEPAYGIPSKWIRPENR ERAELYGYTVIDPLSVMLSHLSETIKRHSFELMTRQEVVRLVENLKKTAPELCEEAFPSV ISYNLLQRILTMLLKEGISIKDLETIVETCFETISENGLPVKDTDQIVEKVRAALKRTIT RMYCEDGNMKVITLDAGLERTMVNSLARGESGLYLALSPELLQSLVRQVAEESKKFNNLT SPPLILTSQVMRIHFYHLIEQFYPNVRVLSFNEVASNVQIQAIGSLRLEDDMEEKGSA >gi|333758476|gb|AFIH01000001.1| GENE 707 662567 - 663346 774 259 aa, chain + ## HITS:1 COG:PA1455 KEGG:ns NR:ns ## COG: PA1455 COG1191 # Protein_GI_number: 15596652 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit # Organism: Pseudomonas aeruginosa # 20 259 9 247 247 147 34.0 3e-35 MNTLNYPSLEGKTNEELFTLYKETHAQEVKQELTMRYVYIVRSIAYQMREMYHDFMQTDD IVNEGVIEIMRAIERYDESRDNKFETYISRRIRGMVIDMMRKNDWLPRNFHRDSRSIEQA TVELNGRLGRAPSDEELAEYLNMNIKKLQKIQRMSNMVNVLSLDMTYDEGNEALLQIPSL DHSTQPEFSFIQKENVRALTEAIEALQEKEKLVISLYYVEELNMNQIAEVMEISQPRVSQ LHSIALRKLRKFMGDREGA >gi|333758476|gb|AFIH01000001.1| GENE 708 663551 - 664321 896 256 aa, chain + ## HITS:1 COG:BB0775 KEGG:ns NR:ns ## COG: BB0775 COG4786 # Protein_GI_number: 15595120 # Func_class: N Cell motility # Function: Flagellar basal body rod protein # Organism: Borrelia burgdorferi # 3 255 21 299 300 128 31.0 1e-29 MYQGFYDLASGMITQRRNLNTISNNMANVQTSGYKKDTMVSTTFKEEMMIRTGRYNKKNP EDLAMASRIKSAARTYTDYEQGSYETTDGIYDTALNGKGFFAVRTDKGTLYTRSGNFSVD ENGVLELAGIGKVQSKEGGDIVLPNDNFAIDPDGSIFDPQSTGDTRKVYGTIKVVDFENY EGLHKEDNNMFSTTQAELAKPADTTVNWKMLEKSNVDMVEEMTTMMSSQRSLQSAAQMLR MYDTVMSKASSDVGRI >gi|333758476|gb|AFIH01000001.1| GENE 709 664363 - 665166 821 267 aa, chain + ## HITS:1 COG:RSp0347 KEGG:ns NR:ns ## COG: RSp0347 COG4786 # Protein_GI_number: 17548568 # Func_class: N Cell motility # Function: Flagellar basal body rod protein # Organism: Ralstonia solanacearum # 1 265 1 260 260 89 31.0 5e-18 MNMSFYVGALGANASQKKMDVISNNLANINNNGFKPKNAIFSELINYNLNDSPEAKTELQ AGGAGTTVVRTNTEYGTAAFTTTGQPNDYAIGTSNAFFKLMDPKSGEISYTRNGHFHAGE FPDGKFYLLTESGKHVLDEKGEKMLADDTALKVIEEAAKAGEGSGAKSSTNGDTEEKKQK IGVYTMTYPSRLVSKGDNEFAIRAGDTKNVESLVEKPVLETGTLEASGTDMAKEMTRLIE SQRAFTYALKMVQTSDEVEGTINQLRG >gi|333758476|gb|AFIH01000001.1| GENE 710 665199 - 665816 574 205 aa, chain + ## HITS:1 COG:BH2434 KEGG:ns NR:ns ## COG: BH2434 COG1776 # Protein_GI_number: 15614997 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Chemotaxis protein CheC, inhibitor of MCP methylation # Organism: Bacillus halodurans # 14 205 12 205 209 116 34.0 2e-26 MKINRYEDMNLQELDVMKEIGSIGTSHAATALSQLLQREVRITIPKVKILGYNGAVKRIG QEEEIVGATLVQMSGDLDGLMLFLYDFHFAKRLLKKLLEKEYEDFSKMDDMAFSALKEVG NIIICSYINAFSQLVGVDINLSVPSSTVNMLGGILTVPMVEFGYESDKLMYCNADFLVDG KSIPSWLLMLPDIHSLNTILGKLGV >gi|333758476|gb|AFIH01000001.1| GENE 711 665818 - 666306 370 162 aa, chain + ## HITS:1 COG:CAC2223 KEGG:ns NR:ns ## COG: CAC2223 COG1871 # Protein_GI_number: 15895491 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Chemotaxis protein; stimulates methylation of MCP proteins # Organism: Clostridium acetobutylicum # 5 162 8 166 166 105 41.0 2e-23 MQLDKQLKVGIGDMKLTRGDGLIITYALGSCIGLAFYDSYIKLGALLHVMLPERVNANDP NVFKYADTGIRETLRKMTAFGMVKSRTTVRIAGGAKMFEISGNAGFGNIGQRNIESVKQI LREEGMKITGEDTGANYARTMSLDTGNGEVLIRTYGRDIVRI >gi|333758476|gb|AFIH01000001.1| GENE 712 666388 - 667338 988 316 aa, chain + ## HITS:1 COG:BH1712_1 KEGG:ns NR:ns ## COG: BH1712_1 COG0835 # Protein_GI_number: 15614275 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Chemotaxis signal transduction protein # Organism: Bacillus halodurans # 11 167 5 160 160 129 42.0 5e-30 MKKKNEKEGILLESGTNEIEIMKFRVLGEFYGINVAKVKEIMMTEKIKPMPHSHPSVEGF FKPRQQLITVINLANYLTGVTPEQGVRDLFIITHFNKMMVAFRVDSIEGISRISWQSIQK PDRTLANGAESVATGIAQCDDQLVTILDFEKIVAEISPETSIKMEEIEQMGERDITTAPI VIAEDSVLLQKMIGAALQKAGFTNVSIFNNGQEAWDYLSSLRNDQNLYQKVNLLITDIEM PMMDGHRLTKLVKDDMRLKRIPVVIFSSLINDQMRIKGKELGADEQLTKPEIGHLVEVLD TLIKRFRESDHALLVK >gi|333758476|gb|AFIH01000001.1| GENE 713 667656 - 667973 349 105 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227874261|ref|ZP_03992457.1| ## NR: gi|227874261|ref|ZP_03992457.1| hypothetical protein HMPREF6123_2396 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_2396 [Oribacterium sinus F0268] # 11 87 40 112 153 98 58.0 2e-19 MKKSSMAVFLSLCLLAGGFFTEKTYADSNFSGDWIKQGDAWYFYLAPNTPLEEEWLSYNG DSYYIGQGGRMVTGKYIDPEDKAEYFLMRTEDFWKMNLRRTVSFT >gi|333758476|gb|AFIH01000001.1| GENE 714 667817 - 668725 639 302 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227873518|ref|ZP_03991764.1| ## NR: gi|227873518|ref|ZP_03991764.1| hypothetical protein HMPREF6123_1703 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_1703 [Oribacterium sinus F0268] # 77 299 2 212 214 161 45.0 7e-38 MAQLQWRQLLYRTGRQDGYRKIHRSGRQGRVFFDEDGRLLEDEFTKDGKLYIGKNGKELR YFNDYRTFLRRELESLKQKDFGKKVEKASGDADSTATTLEGAVIHPEAYALIDINDDGYK DIVLLKDKVREETKLSPNVLAVILYKEETRITKESREEAKNKTENEKLPIKERSTMPLLE AEADGPYTFVVRRNKLTGEIAFLRNNRGGEDYSVFQFKKDEGLNQLYSIATKRDGMGVAK YYSFADEVEFQEYQRILLTIQNQFGEPYPVKSYNLDEAGLEEGLKDFSKEELSFYATQEF NN >gi|333758476|gb|AFIH01000001.1| GENE 715 668755 - 669567 799 270 aa, chain + ## HITS:1 COG:BH4058 KEGG:ns NR:ns ## COG: BH4058 COG1192 # Protein_GI_number: 15616620 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Bacillus halodurans # 1 252 1 252 253 169 40.0 4e-42 MSIIITVSNQKGGVGKTTTSAAICAGLADRGAKVLGIDLDPQGNLGFCMGLEGGNPTTIL DALHGKVKVQQAIRRLPKADILPSDISLSTTGLEKLAPGKREVALKEMLAPVMDYYDYMV IDTPPALNLLTVNAYAVSDFLIIPMSSDILSLVGLSQLRETIDSVKQGLNKNLKVLGILL NKYDKRTTLSRDVEEMADGLAKQISTKVFQTKIRQGVAIAEAPAHGEDIFTYNKRSPAVK DYMSFIEEIAGDIHLKEVIAYGNEENNEIQ >gi|333758476|gb|AFIH01000001.1| GENE 716 669536 - 670360 975 274 aa, chain + ## HITS:1 COG:no KEGG:Closa_3440 NR:ns ## KEGG: Closa_3440 # Name: not_defined # Def: Late competence development protein ComFB # Organism: C.saccharolyticum # Pathway: not_defined # 8 247 4 291 291 67 25.0 6e-10 MATKKTTKSNKTSHVMNLLTSAPVTEEVESASDLGSGTSTSKSSKAEIDEALLSDFHEAA EKTKQAAEHFDGAVSNFKTAVENFDTIEQNKVSESEEKEEKKEEKKEAKDSNLQEEAPPA YKKSKVTVIDESSENDKITNEIQQNLEKKLLSEYDEAEPEFHIVNVMADILQTKDVRGLM QKYGGCTCDKCVADVTALSLTRLPAKYVVLDKDKTSPMIGFYRSKFHADIFVAMLKAVMD VKEHPHHDPNRGKDTTKFDAEERKNLKGGSMNIA >gi|333758476|gb|AFIH01000001.1| GENE 717 670702 - 673248 2625 848 aa, chain + ## HITS:1 COG:BH3614 KEGG:ns NR:ns ## COG: BH3614 COG1345 # Protein_GI_number: 15616176 # Func_class: N Cell motility # Function: Flagellar capping protein # Organism: Bacillus halodurans # 467 844 162 526 532 99 24.0 3e-20 MAGLSTSATSSSGLGNTSLRGFGGMASGLDRDALIEQMSRGTQTKLTKARQETTQIEWKR DAFRELADKTIEFQDDFLSFASSNSVKNEELYESSVVDVRGDAAAAKYITASGASDMTKN LKISAVTKLATAESIVSDVKGSVSAIRSGISADALAGAKTVKTSNLEGKTLEFGNYTTKG VFNQKASFTFPSSYKDDDGKTVEIDYTGDKEKLVEALNKAAKQKNVQLGENKDLKFKYNR GANPGEDFISIEGSSDYVIKKESTALEALGYRAGAPGSTPTGTGSASYGLSLDNFNAGTA AEHKFSKASVQESGFLDYLKDTKLTVSHSGKSREVSILTDAQKQDIETRFVGNDSTTNQN RLDAVAQAMQKNIDKEFGAGKIKVDSSTGSLSFNSANGKDTVSVNSSDQTVRSNLGIEKG ASNRVSLESSIMSSLDKLGLDSFAGNKAGLDEALSHLTINGKEIKGITSDSTVSDMLKKI NDADAGVKASYMQGSGRFVLIHSETGSGRSIDLGDASDANNVANKIFGATAGGGGEVNHG QDAEIVYNYGNGINEVLTSSSNTFNIDGMTITASGKFGVELDSSGNAVTKPDGSYNFDSS KTVSFSSKANVEKATASMKKFVEKYNELITSLNDHVKTRKEKGYDPLTDEQKKQLSQTSI DNWEKKAKQGILYGESSVRNFKFSMDRVMTNAINDLQKAGLKYEDMEKAGISMSSDVHDG GKLVFDEEKFKKAMETNPETVKKIMSGHNGSKGFAKVVEDAMTPYATRYASRNGGSYGEL VKEGGSNKVTLKNTSTTVYQALKENNDKIEKLKTLLSTEQDRYLKQFSQLEKLISKMNTQ SSYLSGLS >gi|333758476|gb|AFIH01000001.1| GENE 718 673406 - 674656 1242 416 aa, chain + ## HITS:1 COG:VCA0088 KEGG:ns NR:ns ## COG: VCA0088 COG1301 # Protein_GI_number: 15600859 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Vibrio cholerae # 8 411 4 416 424 275 41.0 1e-73 MAGENKEMKKGKKPSLAMQIFIALVLAILCGLALQGHSELVEHYIKPFGIIFLNLVKFIV VPVVLFSIMCGIISMQDIRKVGSIGLKTVVFYLCTTAFAVSIGLFFGTLFRRFFPIIATT DLSYEVKGGISLMDTIVNIFPSNFIQPMVEANMLQVIVMALILGFAIILVEEKNIRVVAA FNDFNDIFMKCMEMVLSLSPIGVFCLLCPVIAANGPKIIGSLATVLLAAYIGYIVHAVFV YSATVKVLGGLSPVKFFKGMMPAIMFAFSSASSVGTLPINMECTEKLGAKREIASFVLPL GATINMDGTAIYQGICAIFIASCYGIHLTLSQIITIILTATLASIGTAGVPGAGMIMLAM VLTSVGLPVDGIALVAGVDRIFDMGRTTVNITGDAACTMVVSHLEERKAEKAKAAK >gi|333758476|gb|AFIH01000001.1| GENE 719 674829 - 675272 519 147 aa, chain + ## HITS:1 COG:no KEGG:Closa_3437 NR:ns ## KEGG: Closa_3437 # Name: not_defined # Def: flagellar protein FliS # Organism: C.saccharolyticum # Pathway: Flagellar assembly [PATH:csh02040] # 18 132 7 119 122 72 34.0 5e-12 MPVWKFRIIGEDMKEYQKKYQEQSIMQMSQGELLVLTFDEAIKSLKLAEFALEDKKYDKF EEAMKKCNMIIRYLRQTLDMEQPISRDLLRLYDFVTFDLGLVLAGRDRRKDELPKLVAIL TDLRDGFYGASQKVMDTHMPKEVKVVG >gi|333758476|gb|AFIH01000001.1| GENE 720 675387 - 675788 340 133 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227873508|ref|ZP_03991755.1| ## NR: gi|227873508|ref|ZP_03991755.1| hypothetical protein HMPREF6123_1694 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_1694 [Oribacterium sinus F0268] # 3 131 22 150 159 77 42.0 3e-13 MDVEKLATLYQRRYNIMSKIGKETDEILLAAERQDNVSLDLLLDLRQESLGELETNDIEI RAMVEESVADAKLFRSLTTGGEGEEVFSNKWERKISELYHKIEAMLEEVKRKNKQIEFRA GRTKDYYAEKIFT >gi|333758476|gb|AFIH01000001.1| GENE 721 675872 - 677776 1379 634 aa, chain + ## HITS:1 COG:no KEGG:Closa_3434 NR:ns ## KEGG: Closa_3434 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 6 379 5 357 429 134 25.0 2e-29 MNRSVYEGKFLLNLLGGTLRQDDSFPVVRRMNWGRLYRIADYHEISSAIYLGMLSAGARV PAIFGERFFKRYQEAVRYGEVYEASELEILDAFQALKVPAVILESAAVRRLYHLPETAAN SPLRLYIPEERYYLAKGYLIDLGYETDMFYKGFGEHMKRIGGFQIEIYHTLPFLTKTYKK AMKSLLDRAYADKNRPSLKVLSLESSYLFRLAEASYHFCSDNLRIRELLDLYLFYKLFYK DMNHRFLDSRIKELGIPILSQSLLQIADMWFSSRKETLFPYPKDSISLYDDMEARILSNG TVGRDSIPEAEKLRKAIRDAENREERAEKWRKWKKKWQERWKAIGRQLRWVFPDKGYMVS LYPELEDKGFLLPLYWIKRDWKLLKIVLLPDKIEEKEESGKTEDGKGTESPDRGNNIYSI EEIGYQADPFRKNGRKKVFYKKKKRDEEEETSATTAENPENPSEEAVELPLNEDLAFLSE EINENEEADEDKENDWNLWDFSAPKPFVSADYQAQGNPQAEARSILGNQNTEHGGKLSEA EEERALAMLSLLLSEDGTPTLSEEELKENEKEVEEQYRKSLEGERYDFPKYNASKGSEEK EEHSEEHKKEEYATLDGREVKVQSWSFPKEKSEE >gi|333758476|gb|AFIH01000001.1| GENE 722 678073 - 678501 713 142 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227873501|ref|ZP_03991750.1| ribosomal protein L13 [Oribacterium sinus F0268] # 1 142 1 142 142 279 97 4e-73 MNSYVAKASTIERKWFVVDAEGKTLGRLASEVASVLRGKRKPTFTPFLDCGDYVIVVNAE KIQVTGKKLEQKLYRTHSRYVGSMKETSLRDMRANKPEQVIELAVKGMLPKGPLGRQMYK KLFVYAGPEHKHQAQQPVALSI >gi|333758476|gb|AFIH01000001.1| GENE 723 678516 - 678908 637 130 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227873500|ref|ZP_03991749.1| ribosomal protein S9 [Oribacterium sinus F0268] # 1 130 1 130 130 249 93 3e-64 MATNRNYGTGRRKSSVARVYIMPGTGKITVNKRSIDEYFGLETLKTIVRQPLVATQNEGK IDVLVNVCGGGTTGQAGAIRHGLSRALCEMDSDFRPVLKRAGFLTRDSRMKERKKYGLKA ARRAPQFSKR >gi|333758476|gb|AFIH01000001.1| GENE 724 679559 - 679795 296 78 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRKMVRGLFVLAAMTAALTMVACSGKKAGTTAAPESKVETEAAKETTVVEEKKSDKKDAK ETTVAAEESESTEESSKK >gi|333758476|gb|AFIH01000001.1| GENE 725 680699 - 682636 2163 645 aa, chain - ## HITS:1 COG:CAC0158 KEGG:ns NR:ns ## COG: CAC0158 COG0449 # Protein_GI_number: 15893453 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains # Organism: Clostridium acetobutylicum # 1 645 1 608 608 515 42.0 1e-146 MCGIVGFVGQGNPKEILLAGLSRLEYRGYDSAGIALYAHPFTVVKAVGKLEELKKKVEAS KEFELPYSMGIGHTRWATHGKASEKNAHPHLSMHKEVVLVHNGIIENFAEIKNFLQEKGY SFYSDTDTEVAVNLMEYYYRKEKDILKALFSVQKELKGSFAFAIMFLEDANTLYAMRKDS PLIVGKGKNAFYLASDVSAFLDYTKKIYPVENREILSLSEKEIHIYNQNGEEVKRSSTIA ELSQSQIHKGDYLHFMEKEIFEQPKVVKDTLLYACKQENGKQLENGKPEEYATPGAKQFS SARKDPENAENPDFSYEAFSMAEKDFQDISRVRVIACGSAYHAGWVLKSVCESLARVPVQ VELASEFRYNHPILENGELVLSISQSGETADTLAAVKEAKKLGAKTLSIVNVKGSAIAKE SDFVFYTQAGPEIAVATTKAYSCQLVAGYIFSLLLAKAKGKISREEASNLTEELFLLPGK VQQCLSMDQEILPMAKELKDADNIFFLGRGLDWAISMEGALKLKEISYIHCESYSSGELK HGTISLIEKDSPVIGLLSQEELAGKSISNIHEVRSRGAKCFAIKTEDIAIEEEDFAGSLS VAKTHPLFAGSLLVLPLQFLAYRVSLLKGFDPDKPRNLAKSVTVE >gi|333758476|gb|AFIH01000001.1| GENE 726 683115 - 683306 321 63 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227873501|ref|ZP_03991750.1| ribosomal protein L13 [Oribacterium sinus F0268] # 1 63 80 142 142 128 98 1e-27 YVGSMKETSLRDMRANKPEQVIELAVKGMLPKGPLGRQMYKKLFVYAGPEHKHQAQQPVA LSI >gi|333758476|gb|AFIH01000001.1| GENE 727 683320 - 683712 660 130 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227873500|ref|ZP_03991749.1| ribosomal protein S9 [Oribacterium sinus F0268] # 1 130 1 130 130 258 100 6e-67 MATNRNYGTGRRKSSVARVYIMPGTGKVTVNKRSIDEYFGLETLKTIVRQPLVATQNEGK LDVLVNVKGGGTTGQAGAIRHGIARALCEMDSDFRPILKKSGFLTRDSRMKERKKYGLKA ARRAPQFSKR >gi|333758476|gb|AFIH01000001.1| GENE 728 683894 - 684127 180 77 aa, chain - ## HITS:1 COG:no KEGG:bpr_I0632 NR:ns ## KEGG: bpr_I0632 # Name: not_defined # Def: phage integrase family protein # Organism: B.proteoclasticus # Pathway: not_defined # 1 62 216 277 278 94 70.0 2e-18 MEQIGIDRTPHCSRHTCISMLSEAGVQDTTIKKIVGHSGAMTLTEKVYTHLDMQVLVDAI NKTLENKDSVTADTKSA >gi|333758476|gb|AFIH01000001.1| GENE 729 684493 - 685227 259 244 aa, chain - ## HITS:1 COG:STM3602 KEGG:ns NR:ns ## COG: STM3602 COG2188 # Protein_GI_number: 16766888 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 4 236 6 237 239 156 38.0 3e-38 MNLDMNAETPLYMQLKEAINAAIKDGTYPANEKIPTEIELSEHYKVSRITVRRAVEELCQ ENYLVKCQGKGTFVKSRKIQRKMEHLLGFADACKANECIPSRLVIKRSVTKLSDEDAKTM NVPAGAKAVLIERVDLADGIPMIYESNLFPYPKYKFLLEESLDGSLYQLLKDSYHIQVKG SRNSYLELTRASGSLAKHLRVTNGEPLFYLYSEIFDTDYNLVHICHDYIRGEQYRFYMDD YTRP >gi|333758476|gb|AFIH01000001.1| GENE 730 685518 - 687071 624 517 aa, chain + ## HITS:1 COG:VNG1880C KEGG:ns NR:ns ## COG: VNG1880C COG1574 # Protein_GI_number: 15790774 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase with the TIM-barrel fold # Organism: Halobacterium sp. NRC-1 # 14 514 15 503 506 112 24.0 2e-24 MGKQKADYLLKSDHVFTSTVENPFAGYVAVSGQNILAVGTDDGSDWIDEQTKILELGNQL VTPGFIDVHTFFTGYAIFHIGIDMSGITSQEDFLQKIKEEVEKEKESATVFGHGWNPDGF ETEGLEEKLNEAYPNRSVIVFAADRSTCMMNQKAEETYGFNPKECYPEAYHKIMPEYLND RDFIEPEFKDYMKLMNSRGVTTVKEMGFDDFYGFDSFLKEKEEKKELSLRTFFMSQPVGE GINIEHGKRMREKFQGDFIRFSGYNRMTDGTVASTKGDLLEPYEGTNMHCSIQVEYPMIE KEVQIADENGFRYSLHAQGDGAVHKVVGIFDKCQKKDGKLVNRHAVTDMEFSNPADLKKM GEIGVTGEIYFQIMSLDPADDVKKSIEETIGTERGKYFWNRRGMLDGGMTLSGATDLPLM ITDIPEAIFHGCGGYFPDGKEQYNVQNTITIAEMLKAWTYGGAYNIGMEDKLGTLEAGKL ADIAVLDRNVFEVPMSEMRDVKVSMTMVNGKPVYIKE >gi|333758476|gb|AFIH01000001.1| GENE 731 687105 - 687455 303 116 aa, chain + ## HITS:1 COG:CAC3499 KEGG:ns NR:ns ## COG: CAC3499 COG1082 # Protein_GI_number: 15896736 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate isomerases/epimerases # Organism: Clostridium acetobutylicum # 28 99 184 252 271 59 38.0 1e-09 MAQINTDRIAGMNIHYLYYSLPYFLDTQQKLGVKTIDEWFDTFGDEIIHMHFIDGNPYGH LIWGDGNYPLGEWIDTVVRRGYKGYFGQEITDFAYFEDPASHDKRNMEAYKPYLIG >gi|333758476|gb|AFIH01000001.1| GENE 732 687473 - 688888 1040 471 aa, chain + ## HITS:1 COG:STM4464 KEGG:ns NR:ns ## COG: STM4464 COG1288 # Protein_GI_number: 16767709 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 8 471 3 467 467 286 37.0 5e-77 MENKKKFKLQLPHVYTLAFILIIVFAILTWILPSGQFDRQLVDTAAGEREVAVAGTYHMV DKVSESGDLRQGLHEILMAPTRGIQAAADVVAFVLLIGGTFQILTKTNAMNRGIRKVILK LKGKEVLLIPILMILLGIGGTTFGMSEEVIPFYVMLIPIFFTMGYDSMTTFMIVFLGPQI GYAASTTNPFNVLIAQGVAGIHGNPQLVYRYIWWAIMMTVTIVYVMRYAMKVKKNPTGSI TYQDDLLKKQEFMMDEKDTGFTLRDKLVLLVFAVGMGIIVYGILSHGWYMDEISGVFLLM GILMGIVGGLSEKEIAEQFVIGVKDLAFAAVVIGVCRGILVVAESGMIIDTILNYLSRAL AGVGSVAFVAVMYLVQSLLTLLVPSSSALASLTMPIMAPLCDLQGVNPEASVTVLQFANQ LTNMLSPTAGMTVAGLAVCKISFGQWWKTIWKFFILVTAMALVFCTISAML >gi|333758476|gb|AFIH01000001.1| GENE 733 688924 - 689886 518 320 aa, chain + ## HITS:1 COG:CAC3501 KEGG:ns NR:ns ## COG: CAC3501 COG2222 # Protein_GI_number: 15896738 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted phosphosugar isomerases # Organism: Clostridium acetobutylicum # 1 320 8 336 336 223 37.0 5e-58 MKELVTQILNGREKIEDVYFVACGGSLVDLYPGYYFVRTESRTMHADWITSKEFVVTPPA HLGKTSLVFICSHGGNTKETVEAAHLAKDLGAAVVAMTHTPGSACDDSSLNPIVYSWEDD TNEKDKPQGIVLNILNELMKAQEPDYKLYDAVADGLEKADGIVRAAVKSVKNRTWLFAEK YAKEPFLYIMGSGAAYAAVYGFAICSLQEMQWIDCCYLNSAEYFHGPFEVTDEDHLYILL KSRGRNRVMDERAEVFLNKYAKKYEVIDANDLGLDAIDDSCVEYFNAMVFYAMSVAYRNA LQDKRCHPTDMRRYMGVVEY >gi|333758476|gb|AFIH01000001.1| GENE 734 689994 - 690845 498 283 aa, chain + ## HITS:1 COG:CAC3498 KEGG:ns NR:ns ## COG: CAC3498 COG0524 # Protein_GI_number: 15896735 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Clostridium acetobutylicum # 1 279 1 286 295 204 42.0 2e-52 MYDVSVLGFGDNVVDKYEHIKTMYPGGNCVNFAVYAKMFGAKRSAYMGYFGNDAEAEHVM YALDDIEIETVKCKQLEGENGCARATLVDGDRVFLGSNEGGIRGKTPYVLDRFDLEYIRQ FDFVHSGNYCFMEKELPKIHEAGVPISFDFSDDSEDSYYAEVAPTVDYAFCSFDGTDEEA REHLKKIVSYGPKLAVASRGADGCILYDGQEYYVQKAVPIKEVVDTMGAGDSLITSFMVA YTDYLKKGIMGETAIRESLAAAAEFASKVCGMNGAFGYGKKYE >gi|333758476|gb|AFIH01000001.1| GENE 735 691060 - 691698 229 212 aa, chain + ## HITS:1 COG:SMa2002 KEGG:ns NR:ns ## COG: SMa2002 COG2755 # Protein_GI_number: 16263550 # Func_class: E Amino acid transport and metabolism # Function: Lysophospholipase L1 and related esterases # Organism: Sinorhizobium meliloti # 1 202 5 209 220 138 39.0 7e-33 MGKRILCIGDSNTWGYIPGSGERYEKNVRWAGKLAQILGENYEVIEEGMNGRTTAFTDKI EPGTSALDYLYPCLISQFPLDYIIVMLGTNDTKTRYGVNTVEIGYGLDEVLLKIEETCRR KCQTPEKIVIAPANLYPKKDWIEFAAESAQKAGGLTEEYRSIAALHHAEFLSAREVLGAE CIGCDGIHFTEAGHRKLAEAVAFIIRNNERHR >gi|333758476|gb|AFIH01000001.1| GENE 736 691941 - 693143 628 400 aa, chain + ## HITS:1 COG:CAC3299 KEGG:ns NR:ns ## COG: CAC3299 COG1979 # Protein_GI_number: 15896543 # Func_class: C Energy production and conversion # Function: Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family # Organism: Clostridium acetobutylicum # 1 396 1 385 389 234 34.0 3e-61 MQKFNYYSPTRIVFGAGTRNDIGSLIKEFGVKKVAVIFGGSSAKKSGLLDLVEENLKSEG IDVLLLGGVVPNPLLSKAKEMTKESVKFGAEFVLAVGGGSVIDTAKFVAIGVANPDTDIE EFFFQRKKVERSLPTGSILTIAAAGSETSDSAVLTDDVTGSCIKKGINTDFNRCRFAIMD PELTYSLPKYQIGAGAADIFMHTSERYFTNILGNHLTDELAEGLFRDIIKFGPKAVKNPT DYEAMSEVMWCGSVSHVGLTGLGSKGDTPRDGDWSCHQLGMALSSLFDSTHGATLSAIWA SWANYVKDENISRFAGFARKVYGVAEADDKKAADIGIERTVEYFKSVGMPVSLHELLNRE VSEKDCEDLAINCSYNKSRSIGSFKSLDYNDMYNIYMAAR >gi|333758476|gb|AFIH01000001.1| GENE 737 693159 - 693560 204 133 aa, chain - ## HITS:1 COG:RSc2614 KEGG:ns NR:ns ## COG: RSc2614 COG4271 # Protein_GI_number: 17547333 # Func_class: K Transcription # Function: Predicted nucleotide-binding protein containing TIR -like domain # Organism: Ralstonia solanacearum # 5 92 1 99 233 62 38.0 2e-10 MASNLTLKQVKNMLAKAGLSISEEKRTGNNLGTTLKLTNGCIVNCWDKGTANCQGKNKEV AESILTDVKLANNQNLKEVFVVYGHDGNARTQHFLCGEPIHVSGEQKQPPPGHYPVHQRP AAGVNETEKPLLS >gi|333758476|gb|AFIH01000001.1| GENE 738 693767 - 694507 519 246 aa, chain + ## HITS:1 COG:no KEGG:BF1093 NR:ns ## KEGG: BF1093 # Name: not_defined # Def: hypothetical protein # Organism: B.fragilis_NCTC9343 # Pathway: not_defined # 17 234 19 236 240 82 27.0 2e-14 MIEQNRITNFLKENPSFTTKDFVGMVKESGTVYSDRKAYRMLQDLQDGGQIMKVGRGHYL KASMKAPYHFKASALMDELVGMIDQEYPLITYQTWELYQWNEFVNHQLAHNAFFIEVENG LETTVFDMLLEIYPRVLLNPGMEEYYRYRADDMIIVQKLVSGAPAPQPGTKQASLEKMLV DIFSRKLTGQLIERAEYRQIYEDAFGKYTINELALFRYAGRRHLKSDIRKFIEDETNIEL RSEEWT >gi|333758476|gb|AFIH01000001.1| GENE 739 694504 - 695547 652 347 aa, chain + ## HITS:1 COG:no KEGG:LCAZH_0050 NR:ns ## KEGG: LCAZH_0050 # Name: not_defined # Def: hypothetical protein # Organism: L.casei_Zhang # Pathway: not_defined # 1 343 1 347 349 197 34.0 6e-49 MIDKKVYDLDYIRELQARYKTDPGLLERVLYAFGLLEALVKVGMKFTFKGGTSLMLLLDH PIRLSTDIDIIVDPGTDVESYIEQAGTIFPFLRKEEDIRKGRNNIEKRHFKFIYYSPVRQ KEFYILLDIVFMESPYDQIVTKPIRNDLLVTAPEDLVVTMPTLECILGDKLTAFAPHTTG VPLAKNKELEIAKQMFDVATLAERMQDHKQFRATYDRAVVEELAFRGLELRKEEVLKDTI RACISIISRGEYDKEDYVEYLKGVRSLTDHILGNKFTPEIAAEKACSVMCLAAGALMQTD YPKVADAAGYAKERLAGDQYKRLAYIRKRNLEAYGYLVEATRMLEGV >gi|333758476|gb|AFIH01000001.1| GENE 740 696143 - 696520 149 125 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAFRDIGVRTLTKLRLREYGYFNSLRRPLLTECSYLLYKVNVLGLGEALRNHRERIHIGA LLAKSILCHRTVDIDADELSSQNASKFMLKQLQKFGEFFILFRNFTAHACPSLGVGRHSA IPCPF >gi|333758476|gb|AFIH01000001.1| GENE 741 696662 - 696796 57 44 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNVTFLFFENIFILTSERVQAIVVATPTAVKHKEEGFRQNIEIC >gi|333758476|gb|AFIH01000001.1| GENE 742 696793 - 696984 56 63 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSKDTKHKLLSKKIGYVKNAQKKNQKKKCSNRALLIGSILTYICFIMTIIYDASVKLESD KTF >gi|333758476|gb|AFIH01000001.1| GENE 743 697058 - 698317 1035 419 aa, chain + ## HITS:1 COG:no KEGG:Closa_0416 NR:ns ## KEGG: Closa_0416 # Name: not_defined # Def: cell wall binding repeat-containing protein # Organism: C.saccharolyticum # Pathway: not_defined # 43 186 10 155 763 97 37.0 2e-18 MEKLNKWYFGKESRMKKLEGKKIGSFGRTLVLGTVLLTVASPMTSLAKTNRVNTPGTWRK QGEKWQFLREYGTPEKGWLVYEKDWYYQSPVEELMETGWLNLQGKTYFLSTENGSTLGHV LTGWQWIDGYCYYFEEADQADYGVLFTGGRTKDGYYVDANGRWLNEAGGEPVYISGKGLS ASLSERQVAGVSRSIPSGNVGQVAGVSRSGGRSSGGSTSGSGSGSATSGSTSTGNSENTA ANAGNNTGTTTDNTGNTGNTAENEGNTENNGKSETPASSSNLSKEEEGKSEEKPGSGENG NTEEKPGTGESGKPEEKPSPETPEEKNVIKLVGEAKLNQDVKLYLPKDIMDNIEFAAVNF QPVLSKSYQENEPSYSLDREKQILTLPKSLFKESKTYEISIMAGGEHPFHVITIEVKDD >gi|333758476|gb|AFIH01000001.1| GENE 744 698603 - 699004 224 133 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0573_10444 NR:ns ## KEGG: HMPREF0573_10444 # Name: not_defined # Def: sensor histidine kinase (EC:2.7.13.3) # Organism: M.curtisii # Pathway: not_defined # 1 131 329 460 467 83 35.0 3e-15 MNREFEQKYKFDFEIEEDASNIILKVNESLYQRVIENIINNSIHHNPNGCSIKIKISKSI HRSHKLTIEFSDDGIGVSAEQLKKLNTAVLNNLENAQEHGIGLRIVKQIARYYKWSVQFS TSEAGGMKVVIEA >gi|333758476|gb|AFIH01000001.1| GENE 745 699266 - 700489 1369 407 aa, chain + ## HITS:1 COG:SMb20971 KEGG:ns NR:ns ## COG: SMb20971 COG1653 # Protein_GI_number: 16264844 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Sinorhizobium meliloti # 5 387 4 385 410 279 39.0 7e-75 MKKKIKLAMIGMTAVLFGLTACGNKQEETSKGGKTTIRFASWDTADDVDAQQKLVDKFNE EHPDIQVVLEAYGSDFDTKISASMGSGDAPDVMYMWNYPAYHEGLEPLDSYIEKEGEDYK KNFYSTLWNYNSYDGQIYGLPVGFTTHCVYYNKDLFDKAGVEAPKEGWTWKDLQETAKTI YEKTGVKGFSFSMKPDPYDYEMYLWSNGTAYCDKDGKMEGYVDSDKALETYKMFQDMEKD GYAVATEKSGGDEFQAGQTGMFVYGAWAVKKYTEEGVNFGLAKLPSFGTEKSASILSSSG VAIAKSSKNKEAAWEFVKFWTSEESNKSRIGTEFPVLMSVVESEKILEKPEYAPFYEMLD QSGEYTPASFIMNKWSEVSEKLELAFEEMYNPSSLMDVKEAISSVLN >gi|333758476|gb|AFIH01000001.1| GENE 746 700533 - 701453 739 306 aa, chain + ## HITS:1 COG:SMb20970 KEGG:ns NR:ns ## COG: SMb20970 COG1175 # Protein_GI_number: 16264843 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Sinorhizobium meliloti # 8 294 23 309 319 287 52.0 2e-77 MEFKKKLKGLTPYLFIMPWIIGFFVFTIGPLILSLVMSFFDWSLAGTPVFRGFGNYKEMF TKDAQFWKSLLISIKYAAIFVPLNICIALFLAMLITQNVRGVKFFRTLFYIPTVISGVAV SIIWGWILNGDYGVLNYLLSLLGIKGPRWLVDPAWALFAVILASAFGVGSMMLIFYTDIK GIPTDLYEAAALDGAGKVGSFFSITLPLISPTILFNLITSIIGSFQQVTLVMLLTGGGPL KSTYFYGLYTYNNAFKHHKLGYASANAWVMFIIILLLTAVVFRSSSAWVFYQSETTEKKK GKGGKR >gi|333758476|gb|AFIH01000001.1| GENE 747 701453 - 702277 722 274 aa, chain + ## HITS:1 COG:SMb20969 KEGG:ns NR:ns ## COG: SMb20969 COG0395 # Protein_GI_number: 16264842 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Sinorhizobium meliloti # 10 271 5 266 270 278 51.0 9e-75 MKTDKKTNLVIEILLVIIAIYFISPFIYMFFSSLKTETEAIAYPPKLFPEVWRFSNYIEA WNSQPFNTFLLNTVLVTVLTTLGQLVSCSLVAYGFARFEFKGKNFLFMVLLSTMMIPWDV TMIPLYMEFKIFGWINTLKPLIIPAWFGSAYYIFLMRQFLLGVPKDFEEAARLDGANVFQ IYWMIFMPILKPSLILVAVLNMISVWNDYLGPLVFLQDRSKYTLALGLAAFKGVHGTKII PMLCITVIMIIPPILAFIFAQKYIVEGTGGAIKS >gi|333758476|gb|AFIH01000001.1| GENE 748 702380 - 704656 1928 758 aa, chain + ## HITS:1 COG:all4989 KEGG:ns NR:ns ## COG: all4989 COG1554 # Protein_GI_number: 17232481 # Func_class: G Carbohydrate transport and metabolism # Function: Trehalose and maltose hydrolases (possible phosphorylases) # Organism: Nostoc sp. PCC 7120 # 10 754 13 743 759 433 33.0 1e-121 MIRDNFSKILREAMSEDSWVISEDQYDAKKNLQFESLFALSNGYMGIRGVQEEGNHPSLP YVYINGIFDKSETFMRELVTLPNWSELKFYVEKQLLSVERCEILEYRRALDLKTATLYKH VLLRDESGRESLIESVRFLSRENVHRMGMKVYFTPLNYDGILEIESSINGSILNFCDAPR FKVKHSVVTENSAKEDNIYLEVETRDDLLHIGTGASLHAYENGEEVLRNRRSSAFGEVAL EFADCKMKEGKTVEILKYVSVFTEKDCERAAIRPSVFKELESFRDRGFTEEHRAHKKVYD LMWKRANVRIQGDFELDRAVRFNIFHLMSTASEYDDRVNVGAKLLSGEEYGGHAFWDTEL FMLPFFSFVFPEKAKRLECYRYRLLDAARKNARKNGYQGAQYPWESADDGTEQCPDWTIE PDGSCYRCYVAKYEHHVTAAVMYGAYKYAETTGDTEFLYKEAAEIFVETARFWASRVLYN ETLKLYEIREVTGPDEWHEPVNNNVYTNYLVKWCLRFVSSLITKMKDSREVEYRSLCEKL HFTEKEAETWKEISDKIYIPKKEGTKIFEQFEGYFDLHEVLIEKYDKNDWPIRPEILKTM SVTETQLIKQADVVMLMHLLGQEFDEETIRENYNYYEKRTLHGSSLSPSIYAIMGLKIGD SSKAYRYLRRAALLDLWNIQGNTREGIHAANTGGVWQTVVFGFAGLSLDENGELHLQPHM PKEWEELQFSIMHRGEATEITIKGDNSYTIRKREENEV >gi|333758476|gb|AFIH01000001.1| GENE 749 704661 - 705281 575 206 aa, chain + ## HITS:1 COG:CAC2614 KEGG:ns NR:ns ## COG: CAC2614 COG0637 # Protein_GI_number: 15895872 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Clostridium acetobutylicum # 1 197 6 202 215 188 49.0 6e-48 MIFDLDGVICSTDRFHYLAWKKIADDLGIYFDENINQRLRGVSRAESFQIILENYDGKLS SEETEHYLDQKNKLYRSYLEEMSESDFQEEVKSTLLELRKRGYKLAIGSSSRNAKPILER LKAMEYFDAISDGTNITKTKPDPEVFLKAAEMLGLNPSDCIVMEDAKSGIEAARAGGMKS IAIGDAVPEGLSDYKVKCFGEILKIV >gi|333758476|gb|AFIH01000001.1| GENE 750 706158 - 707087 530 309 aa, chain + ## HITS:1 COG:HI0505 KEGG:ns NR:ns ## COG: HI0505 COG0524 # Protein_GI_number: 16272449 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Haemophilus influenzae # 6 307 8 305 306 145 32.0 1e-34 MKIVNLGSLNIDKTYSVEHFARPGETIKAKSYREYCGGKGLNQSIALSRAGAEVYHAGKV GEDGAILRKALEDSGVNLTYLEKGKQVSGHAIIQIDEAGQNNIIISGGANEELDKQFIEK VLGNFLKGDILLLQNEISNVAFAIEEAKRRGLTIAFNPSPLDKKILGYPLKDVDLFIMNE IEAVEILRGEHLNIGQEESWVDQHGIREEDLRKAFPKAAFVITLGEKGSVYFDENTRVEQ DIFPTKVVDTTGAGDTFCGYFLAGLTKGLLVKDCLELASAAASISVSKPGAAASIPLWEE AMLHVENHK >gi|333758476|gb|AFIH01000001.1| GENE 751 707210 - 708334 1181 374 aa, chain + ## HITS:1 COG:CAC0702 KEGG:ns NR:ns ## COG: CAC0702 COG1744 # Protein_GI_number: 15893990 # Func_class: R General function prediction only # Function: Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein # Organism: Clostridium acetobutylicum # 55 369 48 357 357 157 36.0 3e-38 MKKRSIATMLLMSMAIVACGGAKVQTDNSNKTEAAGDAVKDEAASGKKAILVINGNLGDL GFFDSANRGMERLKNELGMDVKVVETGDDEAKWEPALADAADEPVDYVIAVSPSMVEPVQ KLAPDYPEKKFILIDNVVDFQAANLSNVYCATFKQNEGSFLAGAAAGLSVEEGGTIGFIG GMDIPPINDFLVGYIEGAQSVNSGVKVISTYTGDYYDPAKGKEHAIVQFNQGVGVVFAAA GPAGLGSIEAATEQDKKIIGVDSDQSTAYENKGDKKTAEHIVTSMIKNVGDAIFRAIDKD LKGELKWGAAESLGIAEEGVGLAKNDIYNASFTDEQKAKIEEIQQEVVDGKIKVSSAIGM STEELDKIRNAVKP >gi|333758476|gb|AFIH01000001.1| GENE 752 708447 - 710009 1197 520 aa, chain + ## HITS:1 COG:BS_yufO KEGG:ns NR:ns ## COG: BS_yufO COG3845 # Protein_GI_number: 16080207 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport systems, ATPase components # Organism: Bacillus subtilis # 9 506 4 499 510 408 45.0 1e-113 MGDMNSKVVLKAEGIVKVYPNGVVANKDVNLEIVAGEIHALIGENGAGKSTLMKILFGME QPEKGKIYLNGQEVTLDSPKKAINLGIGMVHQHFMLVESLTIAENIVLGKEPKKNGFFLD RREMLKISSEVAEKYNFSINVEEKIENVSVGVKQETEILKALVRGAKILILDEPTAVLTP QETKNLFEELRNLKKQGHTIIFISHKLNEIMEICDRVTIMRHGVTVETKEVKDTSPAEIS SKMVGRDVVLHIDKLPAKKGELCLEAKDLCYTNKLGKMMLDHVSFKLYAGEIVSVAGVEG NGQSELAEILSGMKEKNEGEILIENKRMQDYSPKAFREKGVVYIPEDRMSVGSAERMSIR DNIFACKVDQYLKKNVFLDESRMEKDAKKWIEDFQVLCFSSKQKVNMLSGGNIQKVVAAR ELTEDFKIIIAEQPTRGIDAGTSELIRRKLIEFRDAGAAVLLISADLNEVFELSDKCVVM WNGKINAYFEDTAELTEEELGYYMLGVKNQSKEEVEKIWR >gi|333758476|gb|AFIH01000001.1| GENE 753 710000 - 711088 1051 362 aa, chain + ## HITS:1 COG:BMEII0086 KEGG:ns NR:ns ## COG: BMEII0086 COG4603 # Protein_GI_number: 17988430 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Brucella melitensis # 19 353 1 343 359 200 31.0 3e-51 MAMNMNAKVDRYNRYFSIIRFVVAVFIAFFISFVIMAFSTEHPFSALLNLFIGPFTTLRR FSTVLETAIPLTFAGLSVCVMFKARQFNLASEGGFFLGALTSAIVAIYMPLPPVLSIILA LFLAGIVGSLVCGIPGICKVKWNSSELVLSLMLNYVALYIGTFIFNQVAKDPSSAYSASF PFREGVNLGNLIPKTRLHYGIFLVAVFVVFTWQFIYKTKWGMKLRIVGENLKFGKYVGIG TTGIIMMSQLLGGFIAGVGGGAEMLGMYSRFQWSALPGYGFDGVVLNILAKENPAYIPIA AFAVAYLRIGADYMYKKSDVASEIVAIIEALVIVLVAANAFLEKYHHKVITRVTAGDKGG KE >gi|333758476|gb|AFIH01000001.1| GENE 754 711225 - 711998 529 257 aa, chain + ## HITS:1 COG:BMEII0087 KEGG:ns NR:ns ## COG: BMEII0087 COG1079 # Protein_GI_number: 17988431 # Func_class: R General function prediction only # Function: Uncharacterized ABC-type transport system, permease component # Organism: Brucella melitensis # 1 247 48 284 303 149 40.0 5e-36 MLISALAGVFASAFLGGPWVGLLVAILVGVICSLLIGYVSMSLKADSVLTCIAFNTMAVG GTVYFMYAVVKDKGTTLALDSGKLPSIPIPIIEEIPVLGKILSNHNILSYVSFFMVFVVY ILLYKTPLGLRIRSAGKDPKALSSVGVSLLKTRYIALAISGVLGGIAGAFMSMGYVTWFS KNMTAGRGFIALAADAMGNSTPIGATMASLLFAVAEALSYGLQVTTFPPELVQMLPYMAT IVGLILYSIKRNADKAK >gi|333758476|gb|AFIH01000001.1| GENE 755 712062 - 713027 938 321 aa, chain + ## HITS:1 COG:ybeK KEGG:ns NR:ns ## COG: ybeK COG1957 # Protein_GI_number: 16128634 # Func_class: F Nucleotide transport and metabolism # Function: Inosine-uridine nucleoside N-ribohydrolase # Organism: Escherichia coli K12 # 10 318 5 308 311 303 53.0 2e-82 MMQENRKRGIIIDCDPGHDDAMAILWALASSNLEIKAVTTVAGNQTIEKVTNNAIRVLTK AKQLHIPVAVGAKEPLIRKLVIGGELVHGESGLEGPVLPENGFAPVEISALKLMEKILEE SEEKITLVGIGPLTNIAQLLITRPELKQKIEEIYIMGGGTIGNWTPAAEYNIFADPEAAK VVFNSELPIVMAGLDVTQKAYITREENEILRAQGNEMSIFVAELIDYFSRYHYEVEGFPG CTLHDPCAIAALVHPELFESVQCNVDVEVTGELTRGMTVVDTVDYQKKLFGKKVVRNTKF LTGVHREEFVKTFFEAMKRLG >gi|333758476|gb|AFIH01000001.1| GENE 756 713157 - 713720 574 187 aa, chain + ## HITS:1 COG:no KEGG:OEOE_0753 NR:ns ## KEGG: OEOE_0753 # Name: not_defined # Def: hypothetical protein # Organism: O.oeni # Pathway: not_defined # 5 165 41 201 306 108 34.0 1e-22 MFLYSGMGVDPASVFELGIGRVFGISYGTSSALINVIILLIVFFIDKSFINISSVIAIFG IGYTADFVRKILTILVQGEIHLLLKLVLILVGLFIMSCGIATYIKADLGVGAIDLISEII SRKTKVQYRLVRVIGDTAFVVIGYILRGTVGVGTVVAAFLTGPTVQLVRPSIERILDIFL KGKEEAL >gi|333758476|gb|AFIH01000001.1| GENE 757 713717 - 714724 624 335 aa, chain + ## HITS:1 COG:SSO0505 KEGG:ns NR:ns ## COG: SSO0505 COG1957 # Protein_GI_number: 15897429 # Func_class: F Nucleotide transport and metabolism # Function: Inosine-uridine nucleoside N-ribohydrolase # Organism: Sulfolobus solfataricus # 4 325 2 302 311 141 30.0 2e-33 MNNRKIILDIDSVGDDILALFFAALHPDFDLLAVSTVSGAAGSIEQATRVALHTVEVTGK QIPVYRGAEGPLVKEQKNLLGDPVNFFASLEEKFGDRLVEMNKSEETKLVEEKESAVDFI IRMAHQYKENLSLVCTGPTTNLAMAIQKDPSIVPLLGEIYVLGGAFHIPGNITPVSEYNI FADPEAAQLVLTSGVPVTLVPLDICENNLFADSMLTRDSLFDITSNGKSSVSDYILKKFP IYIDVWRSYFHLVGFPMDDVITAAVAVEEKLCTYSERCHVEVALEGRLTRGQTIAFNGVQ IYDYPDRKMKNVRIAKTVDGKRFMDLFIRTIINGE >gi|333758476|gb|AFIH01000001.1| GENE 758 714728 - 716608 861 626 aa, chain + ## HITS:1 COG:YPO0008 KEGG:ns NR:ns ## COG: YPO0008 COG0524 # Protein_GI_number: 16120361 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Yersinia pestis # 318 617 2 306 308 165 33.0 3e-40 MKVKDFARLAGVSSSTISKIMHHKDENINPATKERILNLAKECGFLPLQVDELESRSLQV AVLLRSFDHPMQVIGYLEEGERQGYHSLVLSSFSSYEEERRQINLLIARKLDGILWEPIL PLNEDSKKLLEESKIPFFIVESSQDIKPLDYEKMAYFITNELIGLGHRHIACYTEESRNG HKFHNGYCRALVEHELKIKTEFSSFTKEEMEKQFLQDLAFTGIVSISAKKGEEVQKICEE HSYSIPERISLLSLRGDEEGENRNPYLSAYIIPHRRFSSYCMQKLISRVENGESVKEKFS YDFSILKQDTMGAPVNEDSQKVVLVGSINVDHYLIFPSLPESGKTVTTRYSSQYPGGKCL NQSIGLKRLGITPLPIGIVGEDADSNLIYSTLHKEHIDCSGIERDKNVQTGRAYIFVQKD GDSMISVASGANALLDAAYIQKNKALFAEAQYCLMQTEVSTEALFEACLLCKKRKIQTIL KPSACSSFPDEVLPLLDCLVPNKSEIMELVPEAKDYKEAAQYFLKKGVKNVIVTLGMLGC YFVNKDREKSIQGISVSSVDSTGAGDAFISAFVAYLLKGYSLDFALEIANCAGAYSSTQQ GASSLADKDTLENFIMKFKPEIFDLL >gi|333758476|gb|AFIH01000001.1| GENE 759 717077 - 718414 1476 445 aa, chain + ## HITS:1 COG:FN1147 KEGG:ns NR:ns ## COG: FN1147 COG3681 # Protein_GI_number: 19704482 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 31 442 1 409 411 306 42.0 7e-83 MIQAVYVKEKDMVRTDDVYQKYVSVLEEELLPAMGCTEPIAIAYAAAKAREVLGDVPERV FLAASGNIIKNVKSVVVPNTGHMRGIYAAVAAGIVAGKADKQLEVIASVTPEEIEKIKEY MKTTEIKVDLADSGLIFDIDITVYKGNDSARVRIVDNHTNIVLIQKGEDVILSKEISKDN KANNITDRSFMSVEGILDFADSVEIADIEHLISRQIEYNMAIAEEGLKNSYGANIGSVLL ASNKSVLEQGGEAAIKLKARAMAAAGSDARMNGCELPVIINSGSGNQGITASVPVVVYAR ELGIDKEKMYRALVLSNLLAIHQKTPIGRLSAYCGVVNAGVGAGCGITYLKGGRLDEIEH TLVNSLAIASGVICDGAKASCAAKIGLAVENGIMGYEMYCQGQQFVGGDGIVKTGVENMI ASVGRLGREGMRETDKEILKIMLDN >gi|333758476|gb|AFIH01000001.1| GENE 760 718569 - 719027 191 152 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MELNAKRQHQLLQFKLISPYPELRESFGSDQGDSFYEIILANKSASGIESIDYSYIPCSL VPDILPNLDSLCNHFIFNFLKEQPIEPPKYLKIFVNIPEYSFLESAKSFLGTEQNINIWK TNVYDQNMKIQSCIYTACPDSSAETPLFTFLL >gi|333758476|gb|AFIH01000001.1| GENE 761 719018 - 719350 182 110 aa, chain - ## HITS:1 COG:VC1206 KEGG:ns NR:ns ## COG: VC1206 COG2188 # Protein_GI_number: 15641219 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Vibrio cholerae # 26 102 3 79 236 72 46.0 2e-13 MYIHLTCKYIFNSGVSDMKKHQNFKPNYMQIQDYILYKIESGEYPVGSKIPSEVELAEMF SVSRITANKAIKELSIMGILERTRGRGTFVKDFSEEKTIPRLSYLPSSWS >gi|333758476|gb|AFIH01000001.1| GENE 762 719421 - 720440 1171 339 aa, chain + ## HITS:1 COG:MA4355 KEGG:ns NR:ns ## COG: MA4355 COG0407 # Protein_GI_number: 20093142 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III decarboxylase # Organism: Methanosarcina acetivorans str.C2A # 1 245 5 263 370 60 25.0 3e-09 MNREERIRAVLEGKQPDRVPVSVWMHLSEYDQDSRSLAEAMVAFNEKYDYDFIKMMPFGA YMTPDWGAKLKIFCDPYKEVEIIEPAITCPEDYEKLEVLAPTHGSWGRTLQIAQWTSKLI KPNTPYMQTIFSPATSLKKLAGARLLSDMLEHPDKVHHALEVITETTINFVKANIEAGVS GFFFATQLANYDMLSDTLYAEFCKPYDLRVISSYNKETWFNVVHIHGKNIMFDTLEKYPL PILNWHDRQTEPDFKAAREKTNKVFMGGLKEGPAIVGTALQYDSIMSTEGMTVENIKKHI HEAIEMAGGKGLIVAPGCVADPKSPEELLKAVRAAVEKD >gi|333758476|gb|AFIH01000001.1| GENE 763 720521 - 721636 325 371 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149199369|ref|ZP_01876406.1| Ribosomal protein L22 [Lentisphaera araneosa HTCC2155] # 70 367 50 344 346 129 28 4e-28 MIRKALLVTMAASMLVAATGCGNQQKAAETKAAETKAAETKAAEEKDGEKKEETTAAAET KAHAKGEYQLKIGTVVSGDHAWVKMADFMAKELNDRSNGAIEVSVAPGAQLGNDEAMFDD MRLGTLDMVIGGTQNAAPFVSQYQILAMPYLFDSRDQFESILSQDGEVFKYVQGKYDSLG LKLLGLSNGGQRDLHTNKEINKLADLKNLKMRVTSSATESMVWSALGTIPTSMSFNDIYS GVQTNTVNAFECTLAAYNSNALYEVAPYHVKTAHQFTPSHITCSEITWNKLPAEYQTLLF EVSKEAAELGTKVADEADDTLLDKLTKENGVKICEPDRSEFKAVVEPLYPEIAKGCKGED LLELVQKEMKK >gi|333758476|gb|AFIH01000001.1| GENE 764 721704 - 722195 421 163 aa, chain + ## HITS:1 COG:BH0702 KEGG:ns NR:ns ## COG: BH0702 COG3090 # Protein_GI_number: 15613265 # Func_class: G Carbohydrate transport and metabolism # Function: TRAP-type C4-dicarboxylate transport system, small permease component # Organism: Bacillus halodurans # 5 146 11 154 177 63 28.0 1e-10 MFSDLLEKISRIIGGVSVAVFVVIISLQVVGRNILKVPMVWANDLSVVFFVWAVFFGSAI AVRYRKHYVLEFLPEKFAKTNCFLDIVGDISGVIFFYILIRYGYQYTIMGLVRLSPSMNI PQAYFFACIPLSGCFMMWYTILNLAEDFRHMASLFGKKEAIHG >gi|333758476|gb|AFIH01000001.1| GENE 765 722188 - 723489 684 433 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149195935|ref|ZP_01872991.1| Ribosomal protein L16 [Lentisphaera araneosa HTCC2155] # 5 426 4 428 432 268 31 1e-69 MDNNLLIILLLSFTVMVMIKIPIAYALGLSSMIVMVMLKIPLTSAINNMYSSVNNFSLLA VPLFMFLAQLMDKGGITDKLFEICDAFVGHIRGGLGHVNVLISLLFGHLSGSAQADAAGI GSMLIPAMKKAGYDPGFSVAITACSSTLGVIIPPSVLLVVYGAMSGTSIGALFIAGFVPG FMIAIAQCIYTYYRAVKYNYPRGAKHTWKQRAKALYGGIPVILLPVIILGGTSSGFFTAT ESAAISCFYALILMFGVYKTYSVKELPNIFVKTALDFSLSMFAVSAAGITGWLIAYLNAP QMIANAILSITNSYIGVYVLLILFLLFIGTFLSPITAIIIFLPIIQQLGKVVNINDVHLG LVVVLTLSLGMVTPPYGSCLMITSQIGEISIPAAFKSVLPIIGLTVGIILIGVIFPELFL FLPRLIVPMAFPS >gi|333758476|gb|AFIH01000001.1| GENE 766 723627 - 724373 745 248 aa, chain + ## HITS:1 COG:FN0505 KEGG:ns NR:ns ## COG: FN0505 COG2071 # Protein_GI_number: 19703840 # Func_class: R General function prediction only # Function: Predicted glutamine amidotransferases # Organism: Fusobacterium nucleatum # 2 241 3 241 243 243 48.0 2e-64 MKKPVIGISTSIMVDREGDFAGYERIYVNRDYIQSVIAAGAVPLMLPLEDSEENLKESLD LVDGVIFSGGHDISPFRYQEEPHAKLEEICPERDQFDFTLYRLVKERSLPVLGICRGCQL MNVAEGGSLFQDLSQKTTESLKHSQGHGPSIPTHSVKLSPESRLSRILGREEIKVNSFHH QALNRIPDTAEVSGRALDDVVEAIELKDYPFGIGVQFHPEMLQEKDEDMKKLFRALVDAA KEYGKDRQ >gi|333758476|gb|AFIH01000001.1| GENE 767 724487 - 725491 689 334 aa, chain + ## HITS:1 COG:ECs4695 KEGG:ns NR:ns ## COG: ECs4695 COG1609 # Protein_GI_number: 15833949 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 9 333 3 330 330 159 30.0 8e-39 MNGVKRPLTMKDIAKMAGVSTATVSRILNHNGRYSKETESRVKKLIEENNYVIDQTAKGL RKKYLETVGIIVPDITNPHFAKLVLNIQTSLFQRGYSSIIGNTNENLSLEEEHVHSLKAQ HVCGFIMISTKRYHQSLRRFPTVYLDRPARGGEKEDITIESDNYKGGYLAGKQLGIASCK RLAIIRTNSNDCNQDTRKEGFLKALSEAGIPEEKVDVLDIGDALIQSAYSRIREEMRNGF LYDGLFCTTDTLATGVYTALREGNIKVPEEVKIVGFDDCDLAFTTGPGLTSVHQDVGKMA ELAVDALVRRLTGEPLSSTHFYLPVYLSVRASSD >gi|333758476|gb|AFIH01000001.1| GENE 768 725682 - 726740 1510 352 aa, chain + ## HITS:1 COG:alsB KEGG:ns NR:ns ## COG: alsB COG1879 # Protein_GI_number: 16131914 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Escherichia coli K12 # 63 344 27 311 311 227 51.0 2e-59 MRKGKIVALVAAAAMALSACGAGAAKTAETTAAAGETKAAAEASEKAGETEKAEEAASGD EAYAIVLKTQSSQFWQDMKAGIEDEAKKLNVTVDIQSGNTEDDVEGQVTILENFISSGKY KAIGVAPISDVNLNNAIAQATKAGIVVVDIDEKINADALGKLGGALSAYVATDNQAVGKM AGEELTKQLEKGSEVAIIEGKAGAISGEQRRDGAKAAFEEAGMKLVDSQPADWDRTKAFD VATNMMNAHPDLKAFYACNDTMALGIAEAVKKAGKDILVCGTDGDKEAISAVDKGEMTAT VAQDPKAIGAKSLDLLVEAVKNGEKPEVGKEFKTYGIEAILINKDNAKSYLN >gi|333758476|gb|AFIH01000001.1| GENE 769 726818 - 728332 177 504 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 260 481 1 217 245 72 25 6e-11 MNIVEMRNINKSFPGVKALSNISFSVKPGEVHVLLGENGAGKSTLMKVLSGVYHPDSGSI VLNGVEHSKLNPRLSREGGISIIYQELSVVNWLDIRENIFMGRMQSKKIGPVSTIDYAKL NQDTKKLLKQVNLDKYEPNKMASELSISEKQMLEIAKAISFDAKCIVMDEPTSSLTESEV KKLFEIIRDLKSKGIGIVFISHKLSEIKEIGDRISILKDGNYVGTWNVSDLSEEDMVRLM VGRELEKSYQEGHGSFGEVVFEVKNLSRKDGKVQDFHMQVRKGEIVGLSGLVGAGRSEAM EAIFGAVPKTSGEILLEGKRLTIHTPYDALKNGIGLVTENRRETGFFQNFSNKRNISIAS LLKKSKFGGVCGLIQEKNEKEMAEKAKLDLQIKWAGDAQLTKNLSGGNQQKVILGKWISA GVKVLIFDEPTKGIDVGTKSEIYKMMRRLAESGIIVIVVSSEMPELLAVCDRIMVMAEGK VRGEFDIAEATEEKLAMLATGNGG >gi|333758476|gb|AFIH01000001.1| GENE 770 728337 - 729299 1184 320 aa, chain + ## HITS:1 COG:alsC KEGG:ns NR:ns ## COG: alsC COG1172 # Protein_GI_number: 16131912 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Escherichia coli K12 # 2 314 12 323 326 261 53.0 1e-69 MSQGKTNKFAQFWDRYSTVSILCIMILVFGILRPKSFLTPANLVKIIEQSSIYILLGLGE FFAILLGGIDLSISSIMALSGALTAKLMVDFGFSPVLAILVGVVLFGLGIGVLNGILVTG TGLPPFIITLGTQAILRSLVYILTNARSVSGLPTSFQTTIGGHFLFFPVPVMIALLTALI LSLFTWKTQCGRNLYAIGGNPQAAWYAGITVNRHTVIAFALSGLCAALAGMVNIARLAAA EPNAGTGYETYAIEAVIIGGASFFGGVGIIPKVIIGGLIIGTINNGLNMAGVSSFYQQLA MGILLIVAVTLDRFFGGRSK >gi|333758476|gb|AFIH01000001.1| GENE 771 729369 - 730085 843 238 aa, chain + ## HITS:1 COG:alsE KEGG:ns NR:ns ## COG: alsE COG0036 # Protein_GI_number: 16131911 # Func_class: G Carbohydrate transport and metabolism # Function: Pentose-5-phosphate-3-epimerase # Organism: Escherichia coli K12 # 11 230 6 225 231 224 49.0 2e-58 METKKHNILVSLMCMDFLDIKEQLKILEEEMDGYHIDIMDGHFCKNITLSPDFAKAIRPA VKKPMDVHLMTTNPSDWLDPCIEAGVDMISPHAETINTNAYRTMQYIAGAGKKVGVTLNP ATALSYIEHYLNRIDVMTIMTVDVGFAGQKFIPEMLDKIRQAKALREEKGYHYRILIDGS CNKTTYEMLLEAGADDFIVGGSGLFSLHEDLREACKLCKAQFQEAVDRVEGRERAKNA >gi|333758476|gb|AFIH01000001.1| GENE 772 730078 - 731007 794 309 aa, chain + ## HITS:1 COG:alsK KEGG:ns NR:ns ## COG: alsK COG1940 # Protein_GI_number: 16131910 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Escherichia coli K12 # 7 303 8 300 309 187 34.0 2e-47 MPKRSGILGMDIGGTRFRIGFVGQDGILSHYREERTQEYFKEGEDIFSVFAELFQTYKRE FSEEIEILALSVGLPSTIDRSRKVILQTPNIPLFPDNFAFTDQMQEKIGLPVFINRDVNN LLLYDMEQLGISEESSVSAIYFGTGVGNAVFLNGRILLGKNGVASELGHLPVLLNEKKCS CGNVGCLETIVSGIALQALQKEKFPNIRIDDIFVEEKDDPEVDLFVRNMAKVIATEENLF DPDYILLGGGLPMMSGFPKERLEKYAHEFTRKPYPEQNMEIVYAKMDQKNGVLGACLYGK KRLEDSSYL >gi|333758476|gb|AFIH01000001.1| GENE 773 731077 - 731535 595 152 aa, chain + ## HITS:1 COG:rpiB KEGG:ns NR:ns ## COG: rpiB COG0698 # Protein_GI_number: 16131916 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase RpiB # Organism: Escherichia coli K12 # 2 148 3 149 149 179 63.0 1e-45 MKIAIGNDHVAVALKKCIMAFLEEKGIEVINVGTDSEERFNYPISGYKVGKMVASGEVDY GILICGTGVGISLAANKIKGIRACVCSEPYTAKLSKMHNNSNILAFGARVVGEDLAKMIV EEWLSAEYEGGRHQTRVDMIAAIEEGKDITQC >gi|333758476|gb|AFIH01000001.1| GENE 774 731867 - 732763 898 298 aa, chain + ## HITS:1 COG:VC0010 KEGG:ns NR:ns ## COG: VC0010 COG0834 # Protein_GI_number: 15640042 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Vibrio cholerae # 71 295 25 245 248 155 38.0 1e-37 MKKNYVTKGLAFGMVLMLSLLSACSNGAEKKEALPSTEKTEAVTEAKAEGETKAEGETKA AEATTGEKEVIKISTTGNHTYFSETNEKTGELQGFEIDVWNEIAKRKNWDIQWEIAGFPG IIELLEAGRVDTVADQIGVTDERKQVYNFSSVYFYVPYRVVVAEDNDTIHGIKDVYGKKL GLLVNDIAYAFKDQFDPDNKIQYVEYDKSTAVHTDVALGRTDASLMSAMHIEDVKQKSGL KIKGVGDPVYTEDAAYPFHKDERGTKLCEEVTEVLKELKEEGFMHETAVKWFGFDPME >gi|333758476|gb|AFIH01000001.1| GENE 775 732783 - 733454 467 223 aa, chain + ## HITS:1 COG:VC0009 KEGG:ns NR:ns ## COG: VC0009 COG0765 # Protein_GI_number: 15640041 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Vibrio cholerae # 4 222 3 221 223 166 42.0 4e-41 MDKFNVNLFIALFPKILRFLPETFNLAILSAVFALLFAVLIAIIRQYRIRGLYALSSVYV SFFRCTPFVAQLFWFYYGLTQVFESIKLMSPFTALVICMSANYAAFMSEDIRAALNSVSK AQYEAGLSIGMKPLQVVRRIILPQAARVAAPGLSNHFIGIFKSTSIGFMIGYKDMMAAVG LETSKAYRFLEGYTVAIIVYWIILAVLSYGQKKLEKRLNVNYR >gi|333758476|gb|AFIH01000001.1| GENE 776 733502 - 734215 244 237 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 1 223 25 256 563 98 29 1e-18 MEVLKGVSFSINKGEVLVIIGPSGSGKSTLLRCMNFLERAEEGTIKIGDALVDSSIASNR DIQYIRGLSSMIFQNYCLFSNKTALENIMEPMVAVQKIKLETAREKAMEILKAIGLPDKK DVYPAHLSGGQQQRIGIGRAMAVNSQVMLIDEPTSSLDPELIGEVLKLLYQLAKKDTTMI IATHEMEFAENIADKVIFMDKGEIIEEGKPKDIFKNPQSERLKQFLNKFTKTKENAG >gi|333758476|gb|AFIH01000001.1| GENE 777 734215 - 735201 437 328 aa, chain + ## HITS:1 COG:STM3233 KEGG:ns NR:ns ## COG: STM3233 COG0435 # Protein_GI_number: 16766532 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted glutathione S-transferase # Organism: Salmonella typhimurium LT2 # 26 284 21 287 328 137 31.0 4e-32 MNYIEFEGRKIAVRPAVEDYEIDENGEYQRQIPFFREAFGKTGKNPVEKDRYILFWAKDC AWSNRIAIVYSMLGLEDSIKEEIVDWTKLDLPVGWECVNAENHINKESNARFIGELYYRS APEFIGRPAVPVLYDYKEQKIANNDFQNLSYYLEEDFRAFHKVGAPDLFPSEKQTEIREM GNWLYEHINNAIYKMFFGKNKMAYQRGYDSFLFGMEKLEKSLSEQRFLLGDHISDSDIRL FSTLVRLDEDYGKGLGISEKLTDYPNLFDCCREIYQLKDVRKKIFFEKMYRGKITEEILD EIEKMWSSPVSRFEKSKESDSIYLVKKS >gi|333758476|gb|AFIH01000001.1| GENE 778 735345 - 735449 57 34 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNRKTGCEKLHPVFCKTVHAWLALYRLALYSENK >gi|333758476|gb|AFIH01000001.1| GENE 779 735597 - 738095 1371 832 aa, chain + ## HITS:1 COG:CAC0801 KEGG:ns NR:ns ## COG: CAC0801 COG0574 # Protein_GI_number: 15894088 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate synthase/pyruvate phosphate dikinase # Organism: Clostridium acetobutylicum # 30 822 92 844 856 334 31.0 4e-91 MGEIMKARHLEILQEKGFPVPKFILVSENEEADLSFSERDCFAVRSNFSTEDGGEHSFAG QFLTRLNVKREKVQEAVQEVFASYAGSLDYKEKANRGRTEYYLKEQGKEEKQKNAERQEN REKQESTEQKKAEVLVETVLIQEMLFPEKSGVLFTKNPKGILSEMVVILGEGLGDKVVED QENVLTYHYFPGECLYQEGLDTGLALKEEELKTLFTLGERIEQLFQKPMDIEFAIEKGKV YILQAREITTLDMHLPVRILDNSNISESFPGICLPLSESFAVEMYSGIFTSLGRRFLGKR VSSYEELFQRMVGGFSGRMYYEISSWYDILRLLPFSRKIIPVWQGMLGVSNEEISFSKKK PSFFLKCRIALLFCYYFFVSQRKMKELDRFFQERYASYSKRVDEEEDAQALYRIFLEMKE DLLREWDITLINDMVSFISTHLYGKKTAFSLETMKPVRALSALKTVAGKYGLDSEEYRRE KKSYISAYGDRIVGELKLETRTYRTNEELLDRWILDSLETETAERYELSEAKHSLGKACV EKNCVETNFSEKDCEETSCSEKSSEQKQRKSFLYRLAESSCNNREISRLHRTRCFGLMRR IVDKIGEKTIGFDVYYLSLNELKELLFSGKDFSLKIAREKELRKAYERLPVLSRVKLLGK VDRDPLAGEIRVLSYESFKEKGNIEERIGMPGKDEGNRKAGKIRQKEKIGKKDKEAGNST PRVFFGRGVSKGIFRGEVLKIKSLQEIRVAEAKGKILLSYSTDPGWFPYLNMAEGLITER GSLLSHSAILARELEKPAVVNIPNIMEELQSGDIVEIDGDLGICSVIKQKGK >gi|333758476|gb|AFIH01000001.1| GENE 780 738167 - 739249 747 360 aa, chain + ## HITS:1 COG:no KEGG:CA_C0802 NR:ns ## KEGG: CA_C0802 # Name: not_defined # Def: hypothetical protein # Organism: C.acetobutylicum # Pathway: not_defined # 10 355 9 351 358 206 35.0 1e-51 MKNYKIKAVKEQGEKEQFLNLPAMLYKKSCLMQDRKMEEAVLAGKHILVQGNLRFLPFLC VSLKEGKESVAGRIALTLYEDEDYGFVGFYESIEEEEVALLLLETCEKEAKKAGKKGLKG PIDLSFFGRYRFALEEKTPYTGEPANKAYYPYLFEKAGFQICNRYVSNLYDVLEPSYENA KAKRRLEYFQEKGYQFLHPTKENFDRYLSEIYPLLMERYKDFQGFRNISRDNFVSLYSSL KYIVDEEMVFLAYDKEELKGFFLCLPDYGNLLQKPLNPIRLLQILFRKRRPSCYILLYLA VKKGSEGLGLAFSQLATEVLKRKKAKSIAALIQKGKASEGYFQDKCVSAREYVLLAKEFS >gi|333758476|gb|AFIH01000001.1| GENE 781 739256 - 739615 439 119 aa, chain + ## HITS:1 COG:BH1364 KEGG:ns NR:ns ## COG: BH1364 COG0818 # Protein_GI_number: 15613927 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Diacylglycerol kinase # Organism: Bacillus halodurans # 8 101 16 108 130 57 35.0 8e-09 MKNITFRQSVLCAIKGLYFGLKTEKNYKYYLGINLVFFLLDFFYLKVDLSTWYAVILCSA GVYAMEYMNTAIEHLSDFVTKEEHPEIKVTKDLAAAGVLCFGIAFFLIQGIAIGKYFLG >gi|333758476|gb|AFIH01000001.1| GENE 782 739732 - 740322 431 196 aa, chain + ## HITS:1 COG:CAC0796 KEGG:ns NR:ns ## COG: CAC0796 COG0575 # Protein_GI_number: 15894083 # Func_class: I Lipid transport and metabolism # Function: CDP-diglyceride synthetase # Organism: Clostridium acetobutylicum # 1 184 1 183 195 136 42.0 3e-32 MQWILSLYITMFPVILAGVFNMLLLKIPFLKSRCRPIDGGKNWTDGKRIFGDSKSVLGFL LMTALAGILEVFWGFLLQGLGQNKRSLLYLYFENTPAFNFLIGMLFGFLYMLFELPNSFI KRRLSVSAAEQGDKRRGLKLFFFILDQIDSMFGIMLCLGVLVHLTPAQTVFAIILGGLTH VLVNCLLILFRVRKYL >gi|333758476|gb|AFIH01000001.1| GENE 783 740388 - 740990 351 200 aa, chain + ## HITS:1 COG:CAC0798 KEGG:ns NR:ns ## COG: CAC0798 COG1183 # Protein_GI_number: 15894085 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine synthase # Organism: Clostridium acetobutylicum # 4 197 1 201 205 93 32.0 2e-19 MKKIFLGVYHPSVLLTYLGLSISLYGIFFSKSLAFSLILLILAGLCDTFDGMVANAFQRN DLEKAFGVQIDSLSDLISFGVFPVQIYLQYFAKFGVVSFLLSVLYLLSVVTRLAYFNASG GEKKDYFIGLAVTYASFFIPLYGLFSIYFSIEKILPGELLYALLAFFFVFNCRMKKPGIK VRIGLLLLAVLFAILLIRKL >gi|333758476|gb|AFIH01000001.1| GENE 784 741003 - 742016 793 337 aa, chain + ## HITS:1 COG:CAC0799 KEGG:ns NR:ns ## COG: CAC0799 COG0688 # Protein_GI_number: 15894086 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine decarboxylase # Organism: Clostridium acetobutylicum # 14 333 4 287 291 164 35.0 2e-40 MGKEQKQNEQNAPSIIERKTGRVIQEEEYGQRAIYFLYHHFLGRVLLKMIFARPYFSFLR GLYYNSFLSKKEIAPFVEKYGLSKELLKKNYQSFGAFFSRKEAVNLREAGKENTKENGEA WKEKLREKGQARKQAFYATASGKLLAYKIDQEGKIIFPGNENKGKFNPLPLEIKGNYYSI EKILKAPCPEFLKGGTLLVFRLSLPDYHRYIFPARGRLLRTKKIKGRLDSVRKEAAHFKA FSENKREISLLDLSGMGKILHVEVGAMLVGHIHNHRANQLPFRFAAGEEKGYFSLGGSTI VEMLSEKIVIDEDLFENTNKGLETKLEIGERIGYGKA >gi|333758476|gb|AFIH01000001.1| GENE 785 742003 - 742968 864 321 aa, chain + ## HITS:1 COG:CAC0800 KEGG:ns NR:ns ## COG: CAC0800 COG0382 # Protein_GI_number: 15894087 # Func_class: H Coenzyme transport and metabolism # Function: 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases # Organism: Clostridium acetobutylicum # 4 310 2 288 297 226 45.0 6e-59 MERLKRLNIYFKEMYPIVPRLGLGVMIFLEIYFIVLLNHGVGKETLLSFQPVEGQSALYS FFVQHDILGMLICSFTVFSFLLWLRIADDFKDYELDKRLFAFRPLPSGRVTKTDLRIFAT ILISFTLLINFLFMKNFIFCFILYTYGSLMAVWFFQKHKIAKSLPLALVTHNPVQILLNL YVISYTIMKYKLPVFDITNFMAVLTLYFPALIWEISRKIRAPEEETEYVTYSKLFGYKKC IRFVFILTWVDICTNFILVWRLSRLSVLLLFLNTLWCSYCFYDYAKSPGRYRIVSKVERY TYIQESLMILTIVGFLIFGRI >gi|333758476|gb|AFIH01000001.1| GENE 786 743154 - 743465 402 103 aa, chain + ## HITS:1 COG:no KEGG:SSA_1453 NR:ns ## KEGG: SSA_1453 # Name: not_defined # Def: hypothetical protein # Organism: S.sanguinis # Pathway: not_defined # 1 102 1 102 103 130 84.0 2e-29 MELQDFTEKEQEQIKQGLSEAVISDKEAGKKILDLVPEEWIKRIPFFVRGHATTKTIERI AKEYPELYAVAKQAGALPEKEREELRKIITDIFEEKMKKHKIK >gi|333758476|gb|AFIH01000001.1| GENE 787 743595 - 744221 539 208 aa, chain + ## HITS:1 COG:no KEGG:EUBELI_01180 NR:ns ## KEGG: EUBELI_01180 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 1 207 1 207 208 337 79.0 2e-91 MDIHLEKRNAVLAEHVIKGLQSRNMSGYYAKDKEEALKTALELIPKGSSISMGGCMSAQE IGLVSALKESDYHFIDRSKMEPREALLAAYDADIFLASANAMTDDGILVNIDGNANRVSC IAQGPKKLIFIVSMNKICSDLDSAMKRARNIAAPANAQRFDIKTPCKLTGRCSDCKSPDT ICCQFLITRYSRHTDRIHVILVNESLGL >gi|333758476|gb|AFIH01000001.1| GENE 788 744289 - 745230 988 313 aa, chain - ## HITS:1 COG:NMB0044_2 KEGG:ns NR:ns ## COG: NMB0044_2 COG0225 # Protein_GI_number: 15675984 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptide methionine sulfoxide reductase # Organism: Neisseria meningitidis MC58 # 2 169 2 169 181 215 60.0 8e-56 MSKIIYLAGGCFWGVEAYFQRIPGVLSTKCGYANGNTEHPTYKEVCQNNTGHAETVEITY DEECLPLKNLLRYYLRIIDPTNLNKQGNDRGTQYRTGIYYIEEKDKATIEAVLKKEQEKY QGAIVVEVLPLKRFDSAEEYHQSYLNKNPDGYCHIPLALADEPLLDEEKYQALPEEELQK KLTKEEYEVLVNSATDRPFENAYWDTTEKGLYVDRATGEPLFSSKDKFQSGCGWPSFSKP IAQEVIRYLDDDSLGRHRVEVRSQGGDYHLGHVFTDGPKELTGLRYCINSSSVRFIPYED MEKEGYGELKKYI >gi|333758476|gb|AFIH01000001.1| GENE 789 745538 - 745747 173 69 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|315652962|ref|ZP_07905922.1| ## NR: gi|315652962|ref|ZP_07905922.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986] conserved hypothetical protein [Eubacterium saburreum DSM 3986] # 1 67 1 67 70 72 56.0 1e-11 MGEQFGNFFRQYPWQIMCVVSFLCVAGQIGWIYIAKQRGWYFRFNPIRIIVFILLFFFSI YAMITGQRF >gi|333758476|gb|AFIH01000001.1| GENE 790 748158 - 748301 59 47 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|291458681|ref|ZP_06598071.1| ## NR: gi|291458681|ref|ZP_06598071.1| conserved hypothetical protein [Oribacterium sp. oral taxon 078 str. F0262] conserved hypothetical protein [Oribacterium sp. oral taxon 078 str. F0262] # 1 44 96 139 235 69 81.0 1e-10 MGFPIQRSADQLVFANPRSFSQLITSFFGSQCLGIHPMLLLLNQFST >gi|333758476|gb|AFIH01000001.1| GENE 791 748400 - 748492 60 30 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIPKVVASEIGRAQTEVRALRGPDCIKICK >gi|333758476|gb|AFIH01000001.1| GENE 792 751468 - 752424 610 318 aa, chain + ## HITS:1 COG:CAC2949 KEGG:ns NR:ns ## COG: CAC2949 COG0679 # Protein_GI_number: 15896202 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Clostridium acetobutylicum # 105 310 105 301 305 89 26.0 6e-18 MSTLIFPLLAKIASLLLMVFAGVMLVKSGLLKKEDSLPLSKITVYLLSPCVIVSSFSIEL SETAARNLLLCFFYAILANFLFLFMGRMLRRPLNLSPVEEMSVEYTNCGYFVLPLVASVF GDEYLLYVSAYITVFNLLIWTHGLQLFQGKKSGEKQYVKLFLKILLNPNILAIFFGAFLF FTKISLPHPLALAISDLGKMVGSISMLITGIALGGMQVKKIFLYKRIYLISFLRLFALPL CYLLLIKAFSVVDGFLDNPTLFLVTYLSAIAPSAASVAQFAILFGKDEEYASCINIFTTL LTVVSIPIMVFFSDKILT >gi|333758476|gb|AFIH01000001.1| GENE 793 752800 - 753636 764 278 aa, chain + ## HITS:1 COG:no KEGG:Apre_0343 NR:ns ## KEGG: Apre_0343 # Name: not_defined # Def: KilA domain-containing protein # Organism: A.prevotii # Pathway: not_defined # 1 277 1 277 279 437 85.0 1e-121 MSKVKKDTIEAKGIAIQVYTEDFKNDYISLTDIARYKNSEEPNVVVANWMRNYNTIEYLG IWEQLNNLEFNPLEFEGFLKEAGSNAFTLSPQKWVNMTNAKGIYVKLGRGGGTFAHKDIA FKFASWISAEFELYIIKDYQRLKDDENSRLSLGWNLNREISKINYKIHTDAIKEYLLKDL TNEQLSYKYASEADMLNVALFNKRAKQWREENHDLKGNMRDYASLNELLVLANMESYNAI LIGKGMDQKERMIELRKLARTQLMSLEKLGDSSIKKLE >gi|333758476|gb|AFIH01000001.1| GENE 794 753714 - 754577 -27 287 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|160946901|ref|ZP_02094104.1| ## NR: gi|160946901|ref|ZP_02094104.1| hypothetical protein PEPMIC_00862 [Parvimonas micra ATCC 33270] hypothetical protein PEPMIC_00862 [Parvimonas micra ATCC 33270] # 4 282 3 281 285 258 45.0 4e-67 MEQYIHPNNEEITQFIEELELRNLSLKDTTLKIFEWIDNNIAYSRLNSPYFPLQRSDLDL LEFRSGTCGDYSNFLASVLITLGFKVKYVLLKTDCYKNPQEHICLTVQENSVWKLIDPTN PYRKFCGFDCQHQEYEIKTPEEFLKWNKELERKYLKQADEFGDHRYAGLLFAPWIHQDTI FESEELLEVVFYLLILEKPKSFQIYSTYIEYTKNGSYTPIMCRIESGIENYSFSIHTPKN LWDSNQWSEEYLVDEVPQIYKDEKYFLLKDNIQKRLKKIENIANLKS >gi|333758476|gb|AFIH01000001.1| GENE 795 754764 - 756854 2286 696 aa, chain + ## HITS:1 COG:alr2323 KEGG:ns NR:ns ## COG: alr2323 COG0326 # Protein_GI_number: 17229815 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone, HSP90 family # Organism: Nostoc sp. PCC 7120 # 1 695 1 655 658 434 38.0 1e-121 MQKNGSLSIHSENIFPIIKKWMYSDQDIFVREQISNATDAVTKLEKLSLIGEWTKPSDFK GRVTVTVEPEKKTIRFSDNGIGMTAEEVEKYITQIAFSGATEFIEKYKDKANSDQIIGHF GLGFYSAFMVADKVEIETLSYKEGSTPVHWTCDGGTEYSMTDGEKKEHGTDITLHLNEDC VKYANEWELRSVIEKYCSFMPVEIYLDKYPRDSEIISKEEKLDSDIVLEEIPEKVEKDEK GEERKTEAKLKIEKRPVLLNDTHPLWGESPSTVEKEQYLDFYRKTFHDYMEPLFWIHLNM DYPYNLKGILYFPKINSEYESIEGTIKLYNNQVFIADNIKEVIPEYLLLLKGVIDCPDLP LNVSRSQLQNDGFVKKISDYITKKVAEKLSGMCKTERESYEKYWDDISPFIKYGVLRDSK FAEKMTDYILFKDLEEKYCTLPELKEKGKALNGADTAKSSEELIEDVKEEKDAPVADTAD QVENKEEEKIQKVYYVSDAVAQSQYISLFKEHKKEAVYLTERIDQPFITELEAKNSGLRF QRIDADVQEAMKDELSSDEQEKLKAAGEKLEKAFQSLLSKDKLHVKVDRLLSETPASLLS ISEESRRMQDMMKMYAMSGMPMGALPLEETLVLNERHPLVQYLLKHEESTETDSGKLIEE QLYDLARIQNAPLEGEAMKNFIARSEKILLELAKEE >gi|333758476|gb|AFIH01000001.1| GENE 796 757035 - 758996 2343 653 aa, chain + ## HITS:1 COG:FN0050_2 KEGG:ns NR:ns ## COG: FN0050_2 COG1053 # Protein_GI_number: 19703402 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Fusobacterium nucleatum # 117 653 1 481 484 341 42.0 3e-93 MSLERIQILGESMKKEKFLSYLVILTGILVAVILGIRSWSGPSAKSVDAPATAKKTTVTV PGFGGDMQIEVSADENKIYAVNVLSNQETEGIGSKAVAALPGKMVEEQTFNVDGISGATI SSTALRTGVEQALKEMGLDPEKFAKAQASADSAKKEDQNLEADVCVIGAGGAGMISAITA ADSGKKVVILESQGIVGGNSVRATGGMNAAATKWQAENPFEEGSGVEKTLATAAEKYADN AAITALAAKVKEQYAAYQAKPEGYFDSVELMELDTMIGGKGTNNPELVKVLAENSGPAID YLETLGMTIHNVGAFGGASVKRIHRPVDENNKVIAVGSYMVPILEKNINDRENITLLTSV TADKIEQDDAGNVTGVHGLSVDGSQVNVKAKAVIIATGGFAANMEMVEKYQPALKGYMST NAAGALGQGITMAEAIGADTVDMDQIQIHPTVTATDAHLITEGLRGDGAILVNMEGKRFT DEVGTRDAVSKAEIAQTGSQVYLVIDNKMVEKSAVIQGYIKSGYTVTGEDAKSLAEAMGV PADALEETLKSWNEAVEKKEDTEFGRTSFAAGLDTAPFYAIKVTPGVHHTMGGLKINTVT EVLNKEGKAIPGLFAAGEVTGGVHGANRLGGNAVCDFTVFGKIAGESAASYAK >gi|333758476|gb|AFIH01000001.1| GENE 797 759211 - 759480 311 89 aa, chain + ## HITS:1 COG:CAC1679 KEGG:ns NR:ns ## COG: CAC1679 COG4472 # Protein_GI_number: 15894956 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 7 85 8 86 86 84 54.0 7e-17 MNHDLSNTQIIRPLQDSSLAVTEVLERVYEALNEKGYNPISQIVGYIMSGDPTYITSYKG ARSLIMKVERDEILEELMRNYVESKLKKA >gi|333758476|gb|AFIH01000001.1| GENE 798 759539 - 759826 196 95 aa, chain + ## HITS:1 COG:BH1269 KEGG:ns NR:ns ## COG: BH1269 COG0816 # Protein_GI_number: 15613832 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) # Organism: Bacillus halodurans # 1 90 4 92 140 68 36.0 3e-12 MALDYGSKTVGLAITDALGYTVLPYKTLWREREGQLRKTVQAICKVVLEENVGEVVLGLP LNMDGSKGERAEKATAFYELLKKKLSCPLIFLMND >gi|333758476|gb|AFIH01000001.1| GENE 799 759850 - 759954 89 34 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDENAVPRNKQKEVLDQVAAQVILEDYLRTKGKL >gi|333758476|gb|AFIH01000001.1| GENE 800 759978 - 760244 355 88 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227874507|ref|ZP_03992679.1| ## NR: gi|227874507|ref|ZP_03992679.1| conserved hypothetical protein [Oribacterium sinus F0268] conserved hypothetical protein [Oribacterium sinus F0268] # 1 88 1 88 88 107 78.0 3e-22 MEGGRIRLQSEDGNLELEILEETVVSGINYILVTDAPEGEDGTCYVMKDISAPEDEEADY VFAEGDEAESVMDVFAKMLEGEDITIER >gi|333758476|gb|AFIH01000001.1| GENE 801 760266 - 762341 1944 691 aa, chain + ## HITS:1 COG:CAC1683 KEGG:ns NR:ns ## COG: CAC1683 COG0595 # Protein_GI_number: 15894960 # Func_class: R General function prediction only # Function: Predicted hydrolase of the metallo-beta-lactamase superfamily # Organism: Clostridium acetobutylicum # 142 691 8 555 555 592 52.0 1e-169 MKEEKKQTRIKADSPHRIVNIHRSNLTPRDALEESAQHKNSRSTKTMNGRRPGRKRNAEE GVDVAVKTPAKTPGTSRGRSNSAEGGKRSESTLVPNFSSRRNTNVNKREYSLEDFPLLAN TMEVQESKNKGKKPKNGFHGSVKIIPLGGLDQIGMNITAIETEDSLIIVDCGLAFPSGDM LGIDLVIPDISYIKSKIHKMKGFVITHGHEDHIGALPYVLQQINVPIYATKLTLALIQKK LVENGMDKLVKMKNMKYGQSVSFGDIKVEFVKTNHSIQDAASLAITTPAGVLVHTGDFKV DYTPVFGDQIDLQRFAELGKNGVLAMMSDSTNAEKPGFTMSERSVGRTFDLIFAEHQNSR IIVATFASNVDRVQQIINTAVKYKRKVVVEGRSMVNVISVASELEYVHIPEGTLIDIENL KDYPDEQTVLITTGSQGESMAALSRMASGMHRKVHIGPNDVVVMSSHPIPGNELAVDRVI NELYKLRAKVIMQDTHVSGHACAEDLKLLYSLVKPKYAIPFHGEFHHRRAAALIAQSVGV EKDQCLMIDNGDVLEFTTDGEETTYSIKEKVQAGGVFVDGLGIGDVGNIVIRDRQNLSQN GIIVVALTLERYSGNLMAGPDLISRGFVYVRESEDLMEEARLTVQNVVDDCLQSRMNDWG KIKNLIKDSLADFLWKKIKRNPVILPVIMEV >gi|333758476|gb|AFIH01000001.1| GENE 802 762345 - 762884 639 179 aa, chain + ## HITS:1 COG:no KEGG:bpr_I2613 NR:ns ## KEGG: bpr_I2613 # Name: not_defined # Def: hypothetical protein # Organism: B.proteoclasticus # Pathway: not_defined # 4 148 5 159 163 77 35.0 2e-13 MNSRRKSFRSFTEILLSFSLRILFLIGLLYLILQGVKIAYGYGHGLLYERAMEKEPGREI TLEIKQGESAGEIADELKGLGLIDNTQAFVLKAKLYHTSLLPGSYTLSTAMTQLQMLDFI AEEGKKNQELSDKNLVKENEGESETEEENVISGGNENEQDNSSVSGKQQEIDAGNEGEQ >gi|333758476|gb|AFIH01000001.1| GENE 803 762859 - 763518 508 219 aa, chain + ## HITS:1 COG:SP0980 KEGG:ns NR:ns ## COG: SP0980 COG4122 # Protein_GI_number: 15900857 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 1 213 13 221 237 136 36.0 3e-32 MQEMKANNRISDFIGAFLRENEPLLEKIREEAQKDAVPIIRDETAALLRVCLEMHKPKRI LELGTAVGYSGLFMLYSLGENTELSTVENFPKRILKARENFARSPYSENITLLEGDGGEI LERLVLEKKSFDFIFLDAAKAQYPLWLPLILELLPTGGVLFCDNILQDGLLLESRFFLER RQRTIHKRMREFLHLLRENAELESSIVPIGDGVSISVKK >gi|333758476|gb|AFIH01000001.1| GENE 804 763543 - 764769 1405 408 aa, chain + ## HITS:1 COG:CAC1687 KEGG:ns NR:ns ## COG: CAC1687 COG0826 # Protein_GI_number: 15894964 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Clostridium acetobutylicum # 4 384 3 381 406 403 52.0 1e-112 MNRKIELLIPAGSMEGLKTAIHYGADAVYMGGEAFGLRANAKNFTIEKMKEAVAYAHERG VKVYVTANILAHNEDLLPMREYFLELKGVGMDAVLVADPGAFMLAREIMPEVELHISTQA NNTNYETFLFWWKLGAKRVVCARELSLKEIREIREHIPEEMEIEAFVHGAMCMSYSGRCL LSSFFTGRDANQGACTHPCRWKYSLMEEKRPGEYYPVFENDRGSYIFNSKDLNMIAHIPD LIEAGVDSLKIEGRMKTELYVATVTRTYKMAIRDYLEDPTKYQRNIPFYEDEIRKCTYRE YSTGFYYQKPTEEDQIYGNNTYKAGATYLGTVEKVEGNYAFLTQKNKFSVGERIAIMRPG QEDILTEVLEMEDLESGEKINSCPHSKQQLKLRFSVLPGVQDVLRRME >gi|333758476|gb|AFIH01000001.1| GENE 805 764773 - 765627 376 284 aa, chain + ## HITS:1 COG:CAC0441 KEGG:ns NR:ns ## COG: CAC0441 COG1434 # Protein_GI_number: 15893732 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 4 178 12 187 259 68 27.0 1e-11 MLILFLLMGIASFLYFAFLWTTTALSDIWIWLIIGLLHLFLSFLFRKKAKWKRNSLLFRA KVFCLSTYCIFIALFFALSFFLSRYKFGKAENNLDYVLVLGCELEDNRPSQTLKKRLELA ANYAEENPNTRFVLVGGRGKYSASAESSVMYHALLRSGISGDRLLMEFYSKNTKEKIQFG LNSIAEWREELYFRDMEVQREKGLDFQDEEYSYIKEDALEWEDRPPHVGILSSQYQLFHC MAFAKEEQEYYFVTMSAEEPLYLIPHYYTREVLSVLLGRLFHQI >gi|333758476|gb|AFIH01000001.1| GENE 806 765703 - 768603 2313 966 aa, chain + ## HITS:1 COG:CAC3006 KEGG:ns NR:ns ## COG: CAC3006 COG1026 # Protein_GI_number: 15896258 # Func_class: R General function prediction only # Function: Predicted Zn-dependent peptidases, insulinase-like # Organism: Clostridium acetobutylicum # 5 960 13 968 976 723 42.0 0 MMEKYTLLQEKNIAELSTEAKVYEHKKSGARVLCLKNQDENKVFSIAFRTPATDSTGVAH ITEHSVLCGSEKFPLKDPFVELIKGSLNTFLNAMTYPDKTVYPVASTNDKDFQNLMDVYC DAVFHPNCIKNPHTFSQEGWHYTLDEKGNLGYSGVVYNEMRGAFSEPESVLERYIFHSLF PDTTYGNESGGDPEDIPNLTYEAFQAFHARYYHPSNSYIILYGDLDMEEKLNWLDAQYLA EYTKINPDSEIARQKSFRKMSEETEYYPISKEENPEGKAYFSYNFVLDIDQDAKKSLAFS YIGHALISGPGAVLKQRLLEEGLGEDIFGGYADGVLQHYFTITAKNAKEEDKARFLKVIQ DCIREASEKGLDHKTIRAAIHHDAFQYKEADYGNTPKGLIYSLKALDSWLYDGEPWLYLE QDCYFKELEKALDEGYFEALLKEYFLDVKHASLVALLPKQGLTEENAEKLAKKLQEKKET LSEEELEAIKKEEEALLHYQNRENSKEALESLPVLSREDLGKKAEEYTMEEEELSGKRIL LYPVDSKGVLYLRMLFNTKNFSEEELSYLSVLSTAFAYMDTDHYSFQDLNSEIYLHSGGF STDITSYPDFLNKNKYTGVFSLGFKFLEGEMQQGLEYLEEILFHTHLSDEKRLSEILLEI KSRERMRLESTGHSYAVNSAMESFSPTSFYHERVKGIRYYHFIEKLEEDFRKNPKNLGEK LTALSKKLLEGKNLCVAVGGDLEIYRKEKVSLSDFLAKHFSEKEEWEESVFAAGEGERKA WITPSQVNYVARVGSFRDEALPYTGALKVMKNALTFDFLWKNIREKGNAYGVMSGFGRSG ESYVVSYRDPHVGRSYEVYKKIADYLRNFKATELEMTKFIIGAISEMDTPKPAYTKFLLG ISCTLSHLTNEDLQRERDEVLSASPETIRELSAYIEKVFSEEILCTIGNGQKIEENKSYF DTIEEV >gi|333758476|gb|AFIH01000001.1| GENE 807 768760 - 769716 925 318 aa, chain + ## HITS:1 COG:BH1367 KEGG:ns NR:ns ## COG: BH1367 COG1159 # Protein_GI_number: 15613930 # Func_class: R General function prediction only # Function: GTPase # Organism: Bacillus halodurans # 18 318 3 303 304 258 49.0 1e-68 MNQVIEDFFAKENGNGGSREEMIKSGFVSIVGLPNAGKSTLLNALVGQKIAITSKKAQTT RNQIMAVYDDERGQIVFHDTPGIHKAQNKLSVYMESVAEKALGNGDLILWIVDSTEQKGK KEEQILSLLSHSKRKILLVLNKIDLLGGEEALERKKAEYRDCLPFVGIVGVSAYKNQGLE TLLESIFSFLPYGPRYYDEDTVTDLPVREIAKELIREQALYKLDKEIPHGIAVLIDSMQE RKNGIWDVKATLVCEKESHKGIIIGKGGSMLKSIGSGARIQIEKLLEAKVNLQLFVKVRK DWRENPAYLQEYGYREQK >gi|333758476|gb|AFIH01000001.1| GENE 808 769742 - 770392 483 216 aa, chain + ## HITS:1 COG:BS_yqxN KEGG:ns NR:ns ## COG: BS_yqxN COG1381 # Protein_GI_number: 16079582 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Bacillus subtilis # 9 151 7 148 255 68 32.0 6e-12 MKEEVVVHGVVLSEHSQREFDKRLSILTMEEGKMTVWASGAKRPSSPLMAGSRSFVFGTF SLKKGKSGYNLQSVKVDAYFEEIALDLEKACYAAYFLELADFVSQENLPAEEMVNLIYLS LKALLHKDLKNELVRAIYELRLLELEGEYTEQPPLSTKKAVMEAWSYVLSSPLNKLYTFR LEEGTLLDFCGNVEMLCRESFPMQFHSLKILKSLKQ >gi|333758476|gb|AFIH01000001.1| GENE 809 770658 - 772052 1301 464 aa, chain + ## HITS:1 COG:CAC3195 KEGG:ns NR:ns ## COG: CAC3195 COG0423 # Protein_GI_number: 15896443 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase (class II) # Organism: Clostridium acetobutylicum # 1 451 1 450 462 693 71.0 0 MAKNYTMDTIVSLAKSRGFVYPGSEIYGGLANTWDYGNLGVELKNNIKKAWWKKFVQESK YNVGIDCAILMNPQTWVASGHLAGFSDPLMDCKECKERFRADKLIENFCEENGIALEGSV DAWSKEEMENFIVEKQVPCPSCGKRNFTGIRQFNLMFKTFQGVTEDAKNTVYLRPETAQG IFVNFKNVQRTSRKKLPFGIAQIGKSFRNEITPGNFTFRTREFEQMELEFFCKPDTDLEW FQYWKDYCQNWLYSLGMKKEMLRARDHEQAELSFYSKATTDLEFLFPFGWGELWGIADRT NYDLSQHEKVSGQDMSYFDDETNEHYIPYVVEPSLGADRVTLAFLCAAYDVEELEGGDER TVLRFHPALAPIKIGILPLSKKLGEGAEKIHEELSKYYMCEYDDRGNIGKRYRRQDEIGT PFCITYDFDSENDHAVTVRERDSMEQVRIPIADLKKYFDEKLAF >gi|333758476|gb|AFIH01000001.1| GENE 810 772255 - 773136 915 293 aa, chain + ## HITS:1 COG:PAB1737 KEGG:ns NR:ns ## COG: PAB1737 COG0543 # Protein_GI_number: 14521153 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases # Organism: Pyrococcus abyssi # 1 284 1 275 278 254 48.0 1e-67 MYKITRVEHLVDKDWLMDVEAPYVARKAEPGQFMIAKLGELGERIPLTIADYDREKGTIT IVFQVIGASTEKFSHLKVGDYFTDIVGPLGRPSELVEMTKEELEKENIIFIAGGVGAAPV YPQVKWLHERGIEADVILGARNKDLLIMEEDLRKVAKNVYVTTDDGSYGDKGVVTDVLKR LVNEEGKKYTRCIAIGPVIMMKFAALTTKELGIPTIVSMNPIMIDGTGMCGACRLVVGDQ VKFACVDGPEFDGHLVDFNLAMKRQLTYKTEEGQALLELLEAEKSHGGCGNCN >gi|333758476|gb|AFIH01000001.1| GENE 811 773149 - 774537 1459 462 aa, chain + ## HITS:1 COG:MA3787 KEGG:ns NR:ns ## COG: MA3787 COG0493 # Protein_GI_number: 20092583 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Methanosarcina acetivorans str.C2A # 6 462 15 469 469 523 62.0 1e-148 MADMMKRVPVAEQEPKVRAKNFEEVCLGYTEKEAMEEAVRCLNCRNPKCVVGCPVSIQIN EFIHEVKEGNFEKAAEVIARSSALPAVCGRVCPQETQCEGVCIRGIKGEPVAIGKLERFV ADWAREHGFQAAQAGAPNGKKVAVIGAGPAGLTCAGDLAKLGYDVTIFEAFHEPGGVLQY GIPEFRLPKTKVVGPEIENVKKLGVKILTNVFVGRSITVDELLNEEGFDAVFLGTGAGLP KFMNIPGESANGVFSANEFLTRNNLMKAYLPESDTPMRAGKKVVVVGGGNVAMDAARTAL RLGAEVHVVYRRSEEELPARKEEVHHAKEEGIIFDLLQNPIEILVDENDWVTGVKIVKME LGEPDASGRRRPIEIPNSEYVMDCDTVIMSLGTSPNPLISSTTKGLDTDRRGCIIAKEEN GETTKTAVYAGGDAVTGAATVILAMGAGKAAAKGIHEFLSKK >gi|333758476|gb|AFIH01000001.1| GENE 812 774700 - 776487 1487 595 aa, chain - ## HITS:1 COG:FN0453 KEGG:ns NR:ns ## COG: FN0453 COG0006 # Protein_GI_number: 19703788 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Fusobacterium nucleatum # 1 595 1 584 584 489 42.0 1e-138 MTVPERLSALRKCMQEKHIDIYIVPTADFHQSEYVGEHFKARAYITGFTGSAGTAVITLH DAKLWTDGRYFLQAAKQLEGTGVTLMKMFEPGVPTIEEYLEAELKSGQTLSFDGRVVSVG EGDEYASIAKKNGAKIDYQEDLIDAIWTDRPSLSEEPVWFLEEKYSGESTESKLSRIRKE MEDAGCDTHIVSTLDDICWTLNIRGNDIDFFPLVLSYAIIRKDSFDLYIDERKLDDKLKS ILEKVGVTLHPYNAIYEDVKKLPENATVLIDKSKLNYAIFNNIPNAVSIVNKRNPEILMK ALKNPVEVENIKKAEIKDSVAHVRFMKWLKENLGKIRITEMSASEKLDEFRAEMGNFIRD SFEPISSYGPHSAIVHYSSSPETDVELKAGSLYLSDTGAGFYEGSTDITRTYALGEVPKK MKDDFTIVAISNLQLASAKFLQGSSGLTLDILARKPFWDRGLNYNHGTGHGVGYLLNIHE GPAGFRYKFRAGETEEIQEGMVITDEPGLYIEGSHGIRLENELLARKGVQNEYGQFLYFE TITLIPFDLDAISLDMLNEENRKLLNDYHKRVYEEIAPHLNEEEKVFLKKYTRAV >gi|333758476|gb|AFIH01000001.1| GENE 813 776564 - 777199 543 211 aa, chain - ## HITS:1 COG:no KEGG:Closa_2936 NR:ns ## KEGG: Closa_2936 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 207 1 207 207 312 72.0 5e-84 MIQFERSSVMNFENAIRGARNPMNSWAKGDSYYDEKGQYILGPNDLSLAKRLRMAGPDHR KYIRQIFVSVDITAPLYWWKEYDTYKISTVANSTSTMHKIHAKEFTLDDFSHDHLTEEGL ESLKRTVSDLERIRQKYLEEKKKEDWYTLVQLLPSSYEQMRTCTMNYENLINMYYSRKSH KLMEWHSFCDWVQTLPYAKELILAEKEKEEG >gi|333758476|gb|AFIH01000001.1| GENE 814 777394 - 779907 1999 837 aa, chain - ## HITS:1 COG:lin1803_2 KEGG:ns NR:ns ## COG: lin1803_2 COG2898 # Protein_GI_number: 16800871 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 223 837 1 594 613 307 32.0 6e-83 MLLELIKMGKTISPEAVKSILSGLSPFQIVSLLVLGILSVSPMMLYDFILCKELKKKISL GKLIESSWTINSLNNLIGFAGLVDVGLRYSYFTEEDKGEETMQGISKVMPYFMSGLSLYS LLSFGLLFFVQKNAVLRPYSFVLLLASLILPVLLFLSTRKNWSYFGNLSKKKILALIATS LLDWGFVSCFFFYCGRTLGYSVSLANTLPLFFISICIGIVSMIPGSLGSFDLMMMSGLLH FSVNRNEAASWLLLFRIFYYIIPFAIGLLFFIKSMGGQINQKFYGLPKKLSSLLGQGISH FMATFFGFFLMATAILPDEIHSIPLIGQMDPIRGQLLWQFPSFLLGSLFFLLGRLLKRKA AFAKPFSLLLCLVTLFYINLGSPSLFSSLYLLLFLLILFFRRRELSRKAFFYPVEDRLKD FSYILGSIFITVFLLYLSSGNTGKDSLGFLIFHKGVLHKLHTFSKPHFFTVFLDYFLHLF AYFLIPTLCYIAVGALARDKHFSFGEKFNQERFQNFLQSFPNKNLNASLAFLGDKLLYYY QENGVDKVVFQFALEDGKAVVMGEPIGEEKYFPAAISSFTAEAEEKNLTPLFYEVGQDLT LLLHNHGYEFMKFGETAKVPLSDFDLVGKSGKKFRAAVNKLENKGYSFKVMYPPFSDSFL QDLENISDAWLSGRQEKGFSLGFFDKGYLSLAPIACVLDSEGHVQAFSNFLICNGEKEAS IDLMRYNPGTESNGIMDYLFVEIFLYFKEKGVEYFDLGMAPLSNVGQEEHSFFQEKLAFL VYAFTNRFYSFSGLRKYKDKFSPLWEARYLSYPKDSSLLFDLLAIFKIDNRKVKTEN >gi|333758476|gb|AFIH01000001.1| GENE 815 780075 - 780782 524 235 aa, chain - ## HITS:1 COG:MA0993 KEGG:ns NR:ns ## COG: MA0993 COG0596 # Protein_GI_number: 20089870 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Methanosarcina acetivorans str.C2A # 6 110 7 114 273 67 36.0 2e-11 MEFYCKSGERIHVDILGKGFPIVFLHGNNLQSSYFAKQRVLEKSFKLLFVDSLGHGKSGE LQGETSFAYLADSLEELLSSLSIEKCLLVGHSDGANLALEYAGRHGERVAGILANSGNIS FSGLKFLPRYACYLEEWLYRFLGLFLPAFKRKSRVSPLLRENVDVPKELFRKAPYPVVVL VGDRDMIKRKHSMAIAKLFPKGKFLERKGQGHNIPKKDSAYFNQLIEKMVQGIQP >gi|333758476|gb|AFIH01000001.1| GENE 816 780849 - 782423 1631 524 aa, chain - ## HITS:1 COG:SPy1189 KEGG:ns NR:ns ## COG: SPy1189 COG3051 # Protein_GI_number: 15675158 # Func_class: C Energy production and conversion # Function: Citrate lyase, alpha subunit # Organism: Streptococcus pyogenes M1 GAS # 3 510 4 507 510 481 50.0 1e-135 MINAVGREIPDAVLAETGKTVFQGSRHFDDYSYEKTAVKARARIGGEGSKLESHLQEVLR KCNAHDGMTISFHHHFREGDLVAMQVMQAIHEMGFKNITICASSLSKAQDALVPMLEDGT VTHIESSGVRGKIGEAISEGKLQGIAILRSHGGRVRAIESGETKIDIAFIGAPSCDEYGN CRGTGGNSNCGVLSYSAIDAEYAEYVVVLTDCLVPFPNFPADISMTDVDYVLKVDAIGDP EKIATGAARPVTDRRKLMMAESCAKFIAATPYFKEGFTFQTGIGGAASATALCLSEKMRE KNIHMGFGAGGMSKPMCDLLDEGLVSCLLDTQDFDLPSIENLISHPKHFSISTKEYADPF CKGAVVNKLDFVILGTLEADVHFHCNVVMSSEGELMGAQGGHPDTAAGAKCTIVITPLVQ GRIPTIRNDVATVTTPGETVDVIVTDYGIAINPRRPELLEAAKAAKLPIKSIEELRDIAY KICGEPAKLEFEDKVVAIIESRDGSIMDVVRKRKDKNLLTLSAR >gi|333758476|gb|AFIH01000001.1| GENE 817 782416 - 783318 835 300 aa, chain - ## HITS:1 COG:FN1379 KEGG:ns NR:ns ## COG: FN1379 COG2301 # Protein_GI_number: 19704714 # Func_class: G Carbohydrate transport and metabolism # Function: Citrate lyase beta subunit # Organism: Fusobacterium nucleatum # 1 296 1 295 296 286 47.0 2e-77 MNNKNRLRRSMMFLNAQKPNLLKDPYIYGADSLIFDLEDAVALGEKDAARFTLFHALKKV DYQNAEKVVRINGIDTPFWKEDIRCAVFAGCDSIRIPKTESKEDVLTVEAEVAKAEQEAG VDLGSTLLMAAIESAKGVVHLEEICHASDRLFGVALSAGDYTKDLHTGISGSGVELSGAR QLMIIHARAAGIQCFDTVYTNLEDMEGFRKEVELIHTMGFDGKSIINPRQIPVVHAVYTP SEEEIAFAEKVVQEIDEKRSQGIGVFTVDGKMIDIAFYDGAKRTLALAKAAGVLEEVQND >gi|333758476|gb|AFIH01000001.1| GENE 818 783311 - 783613 308 100 aa, chain - ## HITS:1 COG:VC0797 KEGG:ns NR:ns ## COG: VC0797 COG3052 # Protein_GI_number: 15640815 # Func_class: C Energy production and conversion # Function: Citrate lyase, gamma subunit # Organism: Vibrio cholerae # 1 97 1 97 98 63 40.0 1e-10 MEIQKTASAGTTEKCDCLVTVSKGSGGRTVELKSKVLYEYGDGMVALVHHCLTQMGIQDA LVEVEDMGAFDHILVARLQAAVYRSQDKTENIPWGDLLYE >gi|333758476|gb|AFIH01000001.1| GENE 819 783756 - 784091 248 111 aa, chain - ## HITS:1 COG:no KEGG:bpr_I1103 NR:ns ## KEGG: bpr_I1103 # Name: not_defined # Def: HTH domain-containing protein # Organism: B.proteoclasticus # Pathway: not_defined # 5 97 3 94 109 75 43.0 6e-13 MSKKTVFDSILSGLNEALEDAKKETPSLKRQQVTVIPLKIYGANDIKKIRNSTGLSQKYF ASYMGVSIKTVEAWEAGTNHPSGSASRLLHMMELDNELTEKYPFISKASSI >gi|333758476|gb|AFIH01000001.1| GENE 820 784084 - 784434 335 116 aa, chain - ## HITS:1 COG:VCA0468 KEGG:ns NR:ns ## COG: VCA0468 COG2026 # Protein_GI_number: 15601229 # Func_class: J Translation, ribosomal structure and biogenesis; D Cell cycle control, cell division, chromosome partitioning # Function: Cytotoxic translational repressor of toxin-antitoxin stability system # Organism: Vibrio cholerae # 1 107 1 106 110 62 31.0 2e-10 MTRTFIQTNEFSKNWDILGFDDEDLRLLELSILEHPEKYPIMKGTGGLRKARISLDKKGK SGGARVCFVDFILVETVYLITVYGKKEKDNLSNAERNQIKKMIDTLKKTLEEAHNE >gi|333758476|gb|AFIH01000001.1| GENE 821 784843 - 786168 773 441 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227873897|ref|ZP_03992118.1| ## NR: gi|227873897|ref|ZP_03992118.1| hypothetical protein HMPREF6123_2057 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_2057 [Oribacterium sinus F0268] # 8 440 1 414 415 754 88.0 0 MQFREDRMLEGLKKFFTKKEESKSENQSNSGNGVDSEKHSNDNVEQQENHNRAERTRFTL MVESYVVVEGKHFSVEGQLFGNAKEGEKVCALHRDGTISHLTIMKIEKGCALVAKSDKEE QEKTLETPETQGQRRVKLFFARKDILSPDWKYAVITDIPYQIEANVNQAVENPYLLGLSR VFFEKQGEGEFLNLFFRELVRSHYLVAIETDGSLPMGEKDGSVTLKAGMKLTIPHVTMDR GESALPVFTDWFALGAMDQQMGAMNQQMEAGWKRETMIAGFPQIVSMLTKGEGFVINPYG PQLFYVSPELIHNLMRSPGYQSEFGEAKVQSMEVEKDTEVLLGYPKENEEVEALHRRLIS FAKTHSEIAMLDMLLKRDESGTTSYLIIVDMPEEHCHECFKEIYESCRDLLHRVPYMDFV TLQRGDFAKGARTEEPLYVRE >gi|333758476|gb|AFIH01000001.1| GENE 822 786328 - 787413 925 361 aa, chain + ## HITS:1 COG:BH3254 KEGG:ns NR:ns ## COG: BH3254 COG3641 # Protein_GI_number: 15615816 # Func_class: R General function prediction only # Function: Predicted membrane protein, putative toxin regulator # Organism: Bacillus halodurans # 1 359 1 333 336 230 47.0 3e-60 MQAFLKRKNIEISLKRYGIDALSAMAQGLFCSLLIGTILNTIGQRLGVSVLTRVVATIGG VDYTVGAMASAMSGPAMATAIAYALQAPPLVLFSLITVGFASNALGGAGGPLAVLFVAIL STEIGKAVSKETKVDILVTPLVTIGSGMLFSALLAPLIGKAAIQVGSLIMWATELQPFFM GILVSALVGIALTLPISSAAICAALGLTGLAGGAAVAGCCAQMVGFAVISFQENGVSGLV SQGLGTSMLQMGNIVKNPRIWIPATFASVITGPLATCIFHFENNGPAVTSGMGTCGLVGP IGVYTGWLKTVEEGGKSAVTAMDWISLLLLCFILPAILSLLCSAFCRKMGWIKEGDMKLA S >gi|333758476|gb|AFIH01000001.1| GENE 823 787558 - 788193 450 211 aa, chain + ## HITS:1 COG:L35832 KEGG:ns NR:ns ## COG: L35832 COG2315 # Protein_GI_number: 15674158 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Lactococcus lactis # 4 107 3 110 114 73 35.0 2e-13 MKTREDAIQFGLSFPDSYIDRPFRTAGWELIRFRENKKAFLLIYERNGFVNLNVKVHPEW RDFWRRVYPAVQPAYHQNKEHWNSIILDGSIPEEELKRMISESYALISDSPTKRIYEAVK KIPKGRVATYAEVAEMAGNKKMSRAVGNALHKNPDPENIPCFRVVNSKGELAPAFAFGGE DEQRKRLEEDGVEVKGGKVDLKKFGIGKDKV >gi|333758476|gb|AFIH01000001.1| GENE 824 788270 - 789526 1074 418 aa, chain + ## HITS:1 COG:lin2082 KEGG:ns NR:ns ## COG: lin2082 COG0389 # Protein_GI_number: 16801148 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Listeria innocua # 15 345 7 337 356 226 40.0 6e-59 MQELSQTEYQENQIILHVDMDAFYASVEMRDNPALKDKPLIIGAKPTERGVVATCNYEAR KYGVRSAMNSKEAFRLCPKAVFLYPDFEKYKAVSEELHEILESYTKQAEYIALDEGYLDL TEVAKDFSEAERIGREIQSRVKDELHLTCSVGIAYGKTAAKTASEEKKPNGFFMIQRRED YVELLRDRDVRALFTVGEKTAEKLYSFGIYTVKDLQEKEKEVLRLLGNQGKMLLELSYGI DHRKVVPYRPEDTQSISKEMTFQEDLTDYSFLDDVLFLLSFRVESRAKRYGLYARGVSLK ITFADMKTITRSALISESTQSAFSLYKNASALLQQIPRRRVRLIGEGFYHLEENEGRQLS FADIFMEEKEREEKEMEERWKQMETRYGTMFQDRKSTILSGDRVYDLIEEMRKFGVKD >gi|333758476|gb|AFIH01000001.1| GENE 825 789523 - 789627 68 34 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTFVTREVTLKPRWRVTFYFEGQDAYLVDYQDYH >gi|333758476|gb|AFIH01000001.1| GENE 826 789648 - 789953 193 101 aa, chain + ## HITS:1 COG:SMc02151 KEGG:ns NR:ns ## COG: SMc02151 COG3093 # Protein_GI_number: 15964257 # Func_class: R General function prediction only # Function: Plasmid maintenance system antidote protein # Organism: Sinorhizobium meliloti # 3 78 11 86 110 72 46.0 2e-13 MKRKPTHPGNVFLEDVLKPLNLSITEAARMLGISRKALSEFVHEKVSMSPEMAIRISRAT GTSVESWMNMQQKLTIWEVERNIVNNVIAFPGLPRENTVAL >gi|333758476|gb|AFIH01000001.1| GENE 827 789965 - 790537 484 190 aa, chain + ## HITS:1 COG:lin1889 KEGG:ns NR:ns ## COG: lin1889 COG1418 # Protein_GI_number: 16800955 # Func_class: R General function prediction only # Function: Predicted HD superfamily hydrolase # Organism: Listeria innocua # 2 189 3 199 201 126 41.0 3e-29 MEESRIERATDYITKLFQGNGDGHDLAHSLRVYKNALMIAEMEGQGEEEIIALSALLHDC DDHKLFHTENNANARRFLEQEGLSEERIEAICRNINSVSFSKNRGKVPESIEGKIVQDAD RLEAIGAIGIARCFQFGGSHGRSLENSIEHFYEKLLLISKELNTPAARKMAEKRDKLMQD FLKEWGEEMN >gi|333758476|gb|AFIH01000001.1| GENE 828 790837 - 792462 1785 541 aa, chain + ## HITS:1 COG:L121483 KEGG:ns NR:ns ## COG: L121483 COG0281 # Protein_GI_number: 15672882 # Func_class: C Energy production and conversion # Function: Malic enzyme # Organism: Lactococcus lactis # 1 540 1 540 540 849 77.0 0 MKAHEILNNPFLNKGTAFTMEEREKLGLIGLLPPHVQTIEEQAAQTYAQMEKKENDLEKR LFLMQIFNTNRTLFYYLFSKHLAEFNPIVYDPTVSLTIEGYSDLFVDPQYAAYLDINHPE NIEKTLKNAAGDREIRLIVVTDAEAILGIGDWGTNGVDISVGKLMVYSGAAGIDPACVLP LVIDAGTNREELRNNPNYLGNRHERVRGDRYYDFIDQFVETAERLFPKLYLHWEDFGRGN AANILEKYRTKIPTFNDDIQGTGIVTLGGVFGAMAISGQKLRDQVYLCFGGGTAGAGIAS RVHREMMREGLSEEEAYKRFFMVDKQGLLFDDMEDLTPQQKPFAKKRSDFPNADKLTDLA EVVRTVKATILVGTSTQPNTFTKEVVEAMCQNTARPCIFPLSNPTELAEATAEDLITWSD GKAFVATGIPADPVSYKGVEYIIGQANNALIYPGLGLGMLASEASLLTDEMIAAAADSLS GITDITKPGAPVLPPFKYVGEVSIKVAEAVAKKAKEQGLARAKEQDMEKAVKDLKWYPEY K >gi|333758476|gb|AFIH01000001.1| GENE 829 792474 - 793421 1014 315 aa, chain + ## HITS:1 COG:MTH1382 KEGG:ns NR:ns ## COG: MTH1382 COG0679 # Protein_GI_number: 15679381 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Methanothermobacter thermautotrophicus # 3 314 2 302 302 73 25.0 5e-13 MTVFLTSIQSIIPIIVIIVLGYILQLKGWFSESFGPNLSRLIMNVALPVSIFVSVLKYLT VDKLISLSGGLLYTFGAFALTYIFGFLAVKLCGVRAGRRGTMMNTFVNANTIFIGLPLNV ALFGEEALPYFLIYYITNTISTWTLGVYIMTSDSVGGKKKEGTKFDWKKLLPAPLVGFLI ALVFLLLGISVPAFAENTLTYIGNIVTPLSLIYIGIILAKAGLRSIHLDKDTVVAVVGRF ILAPAIMYALLFFTGRGLPTKEFNTFVIQSATPALAVLPILASQGDGDVEFSTNVVTIST VLFILVVPILMTLLG >gi|333758476|gb|AFIH01000001.1| GENE 830 793663 - 793929 269 88 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MEENEGRQLSFSDVCMEEKEREERELEERWRQMEDRYGTLFQDRKTMILSALLHDRDDHK LFHTENNANARSLLQEEGLSEGGIEEMN >gi|333758476|gb|AFIH01000001.1| GENE 831 793976 - 794245 160 89 aa, chain - ## HITS:1 COG:STM3516 KEGG:ns NR:ns ## COG: STM3516 COG3041 # Protein_GI_number: 16766804 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 4 89 5 89 91 73 42.0 1e-13 MKYEVKFTNQFKKDFKLAKKQNKDLNKLFDVVNILAEGGILEAKYRDHDLSGKYKGTREC HIEPDWLLVYEIQNDVLVLILYRLGTHSE >gi|333758476|gb|AFIH01000001.1| GENE 832 794242 - 794514 329 90 aa, chain - ## HITS:1 COG:SP0275 KEGG:ns NR:ns ## COG: SP0275 COG3077 # Protein_GI_number: 15900209 # Func_class: L Replication, recombination and repair # Function: DNA-damage-inducible protein J # Organism: Streptococcus pneumoniae TIGR4 # 1 84 1 81 87 60 39.0 7e-10 MATTNLNIRTDKDIKEQADQIFSKLGLNMTTAINIFLRTTIRENGIPFSLKLDTPNEETA TAIEEGRRIALDSSVKSYKTMDDLKAALEV >gi|333758476|gb|AFIH01000001.1| GENE 833 794687 - 794833 202 48 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNIEYYEKTIQKMYEAIAVIEGLKDLKEGNTEEGAETMCKLKEKFLLK >gi|333758476|gb|AFIH01000001.1| GENE 834 794870 - 795004 112 44 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MADAGVDVPALKEKLGGQKSYKESAKKCRFHEDGINTIRKVRKK >gi|333758476|gb|AFIH01000001.1| GENE 835 795270 - 796100 549 276 aa, chain + ## HITS:1 COG:MJ0749 KEGG:ns NR:ns ## COG: MJ0749 COG0348 # Protein_GI_number: 15668930 # Func_class: C Energy production and conversion # Function: Polyferredoxin # Organism: Methanococcus jannaschii # 203 276 165 234 246 63 37.0 4e-10 MRDFLKKYALVLLIGGVFEAVAVSLWLTKQNLFYLFNFSYIGISLSLGIFLLGRKYPYAR RIVQLLVGLYMLVYLGLINRENMQIEGFWYYLFTGVFEAATIHYAVAKIFGPLIFGRGFC GYACWTAMVLDFLPYKTRELPRKNFGWIRYLTFALSFLFVSTLFLLKVGNLERIMFWAFL IGNLAYYLVGIALAFLFKDNRAFCKYICPVTVFLKPMSYFSLVRIRCDKTKCISCGKCKK VCPMDVEMTDNSRKRKNGTDCILCMECVKVCPKRAL >gi|333758476|gb|AFIH01000001.1| GENE 836 796135 - 796812 538 225 aa, chain + ## HITS:1 COG:SA2418 KEGG:ns NR:ns ## COG: SA2418 COG0745 # Protein_GI_number: 15928211 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Staphylococcus aureus N315 # 1 219 1 219 221 198 48.0 7e-51 MKIFIVEDEENIVRLLKDELMQWGYTVESVKDFQRVSDEVEEGNPELILMDISLPCYNGF YWTEKIRKFSHVPILFLSSHSESMDMVQAMQFGADDYIVKPIDLYVTRAKIQALLRRTYE YTAVQDKLSFQGLQLDLAKAVLQGEGFNIDLTKTELLILECLFLAKGGISKREEIMNHCW QGEDFLDDNTLSVNITRLRKKLSAVGLEDLIQTKKGIGYFLALEK >gi|333758476|gb|AFIH01000001.1| GENE 837 796966 - 797892 735 308 aa, chain + ## HITS:1 COG:SA2417 KEGG:ns NR:ns ## COG: SA2417 COG0642 # Protein_GI_number: 15928210 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Staphylococcus aureus N315 # 10 307 3 293 295 195 34.0 1e-49 MQIKKQIQAYLQTKYELFGFFLLLLSIFGGIFFFGHLPWNYFVLGAELSSFLLFIYLILG YFSFVRKESLEKALERLEREKKEEERRRIEEKRELSEYFLLWVHQIKTPITVSKLLLRKT DSEHKKKLEEQMFYIEEYSNMAMNYLKMQNRSADMDIHPVDLEACLKRLFKKYAPIFIEK QLSLHYEGFCTDGSGEKAEVISDEKWLSILLEQLLSNALKYTKEGSITFSFDRESSYLRI QDTGIGIPSSDLKKIFDLGYSGFNGRATEKSSGLGLYMVQKIAGFLQISVSVESTVAVGS CFTLRFPS >gi|333758476|gb|AFIH01000001.1| GENE 838 798117 - 798980 863 287 aa, chain + ## HITS:1 COG:SP0912 KEGG:ns NR:ns ## COG: SP0912 COG1136 # Protein_GI_number: 15900793 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, ATPase component # Organism: Streptococcus pneumoniae TIGR4 # 1 251 1 252 252 270 55.0 2e-72 MSILECKNIKKVYQTKNLSTEALRDVNFSVEKGEFISIMGESGAGKTTLLNILATLDSPS SGVLLLNGKDMGNLKKEEVSAFRRRELGFVFQDFNLLDQFNNRDNIFLPLVLSEEKESLM QERLAKMQGILGIEELLEKYPYEVSGGQKQRIAIARAIITNPSLLLADEPTGALDSASSE MILQLFHKIHAEGQTILMVTHSLRAASYADRVLFIKDGVVFHEIYRGNEEGQRDFMERIS EAQLVLSKQQNALRPDSLYDRQTEMATEMTTEMAPKDAFTERKGREA >gi|333758476|gb|AFIH01000001.1| GENE 839 798983 - 800998 1601 671 aa, chain + ## HITS:1 COG:SA2415 KEGG:ns NR:ns ## COG: SA2415 COG0577 # Protein_GI_number: 15928208 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Staphylococcus aureus N315 # 12 670 12 661 666 250 27.0 7e-66 MSFFMARRFALKNLLANRLLEIPFVLSSGIMGMLFFIMASLLENHYVETRHRDLPLFIRV GTILLCIFTFIFIQYAVNFMLKKRNKEFALYGILGLEKKHIRKIIAIEFFCLFAFILVLS IVGGYLFGQMVFLMLNFIMKDVAESLMDFPFSFTALFYTTVLLFVLYLFTLLRSSFRISF STPMELLQKEHEGEGEPKSRVILSLLGFLLLGVGYGIALFIQGLLSSFNYFFLAVLAVIF ATYLLYISFSVLLLKMEKKRPSYYRPEKFLSISGLLYRIKGNAVSLASISILSTGVILSL ATTICMYANIQNKGNSLFSREYSMELSPFSYPEKEGEDLKQSLNQMVLESVNSPTEVEGL YSMATLATGGFVEDGQILPVQNQENMANAKDPNMIILYDLAGYNARFQKHITLGENEILL CNNRNMLKNPSSLKIGDRVFQVSEIQNILPVDMVALGSYGIVVRDLATMQYIEKYLQPEE HRSESTAIEFSTHWNLKGISKEAYQPKYTALKKELKAFSEKNFKGNYRYSVENKEEYLQS QYELNGGFLFLGVLIGIIFLTGTVLISYYKQISEGYEDREKMQIMKKLGLSDRLIQKTGA AQILWLFFGPLAVATLHCLVASKIVFRLLGLFGVGSLTLYAGCLSAVLLVFALVYLVIFR LTKKAYTRIVE >gi|333758476|gb|AFIH01000001.1| GENE 840 801095 - 802477 1069 460 aa, chain + ## HITS:1 COG:DR2257 KEGG:ns NR:ns ## COG: DR2257 COG2312 # Protein_GI_number: 15807248 # Func_class: R General function prediction only # Function: Erythromycin esterase homolog # Organism: Deinococcus radiodurans # 65 440 205 551 554 93 25.0 7e-19 MKMIGKLLKLAGKIVLALLAFLFVCILLYFGKLKFEELQAHREIKEVQAEMKPLSAEYIP ENISILSIGEAAHGCKEMQELKLSVFKEMVEKQGFTAFALEADYGECAEINRFIQGGEGS AEEMVQKFAFPIYHTKEMAELISWMREWNESAPEEKKVRFYGFDMQDPEGSHAFLKEYSL SHKLTTEEEFAKNLDCIKDENFSLNEKNAGEVIAFLDSLKEKAEKSPEEAQKETGNIANE QEAKEKQGLEDNQDSTEKKEFQERQDFLMELNTVRQAAETWLSKEDSSVLRDRDMEENVK KILEIEQKIGSGKLVISAHDGHIQKENPIYNSMGVLLTKDFGEAYYAIGTDVWKVTDNIK VLGEAKRTVQSFVSVDPLAAQARFAKGKQYALYFSGITDEKSKVYQLIHNPMKMLQLGEG YTFVMRFFPNSYRVKSEPVQRYDGMIYLYEGKPIEILEKK >gi|333758476|gb|AFIH01000001.1| GENE 841 802688 - 803239 293 183 aa, chain - ## HITS:1 COG:SPy0529 KEGG:ns NR:ns ## COG: SPy0529 COG5002 # Protein_GI_number: 15674629 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Streptococcus pyogenes M1 GAS # 70 170 323 426 450 62 33.0 5e-10 MYRPKDLQIFQMVLIDWKSILKIKKFSYAMEGKKDVVSNEVILYWIEVMSGICRLNDLNL EIIKSDSSNIRLDKEEVAVALQNIVTNAVEYSKKGSKITVEFKDEPEEFILTVRDEGTGF NKDLLPLLTEKFISGKAKDKSYKHGLGLWVVKNIVMANNGNLYLNNYGRGISGAEVKMVF YKE >gi|333758476|gb|AFIH01000001.1| GENE 842 803169 - 803984 448 271 aa, chain - ## HITS:1 COG:no KEGG:BCAH187_A3808 NR:ns ## KEGG: BCAH187_A3808 # Name: not_defined # Def: putative lantibiotic biosynthesis sensor histidine kinase # Organism: B.cereus_AH187 # Pathway: not_defined # 1 271 15 288 454 111 30.0 3e-23 MELVYSFSIIVLFYVGLNVLLNAGVVYPANYADIQSEKVEAGFKTEGWTPDEIPYYYDFL YLKDGKIIENTIDKKYDDLVQQAIKNGRAISDEIIGSNVFKAYISGNRQLVIRYRVNVIF TNKKLYKLFENFEWGYIVFILTIWFLGFALLLIRSSNILKREIHKIAMANDNIRRMDLDY EREHSKYKEIEGVLVSVDVLAENLKKSLGKQWDMQVKQKELVEQLTHDIRTPITLIKGNL ELLKEEHRDVSSERFADISNGIDRLEKYIEN >gi|333758476|gb|AFIH01000001.1| GENE 843 803968 - 804678 438 236 aa, chain - ## HITS:1 COG:SPy1081 KEGG:ns NR:ns ## COG: SPy1081 COG0745 # Protein_GI_number: 15675069 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Streptococcus pyogenes M1 GAS # 3 219 4 228 228 141 38.0 1e-33 MNLLIIDDDKDLLKLLQLTFEKEYNVVICDSALKVDPSNLYKYDLIILDIMMEEMSGFDF LIKYRNVLDIPIILLTAKDFEKDKVEGFALGADDYVTKPFSIAEIRARVAAHIRRENREK HSKLIDYPISCDLLSKKFYFDDEEISFTNSEYEICEFLLKNKNQVFSKEKIYTAIYGYDK EGDSSTTITERIKLIRSKFEPYCINPIKTVWGVGYQWEIKKFKIFNQQICNYGVSI >gi|333758476|gb|AFIH01000001.1| GENE 844 804684 - 805415 343 243 aa, chain - ## HITS:1 COG:no KEGG:GYMC61_1169 NR:ns ## KEGG: GYMC61_1169 # Name: not_defined # Def: lantibiotic ABC transporter (permease) # Organism: Geobacillus_Y412MC61 # Pathway: ABC transporters [PATH:gyc02010] # 4 237 6 257 262 63 26.0 9e-09 MFNILKSYWIRTKRTPSRMVIILCPLLFTGLFIVYLLSSTSLKGVELAYFFGAYTILAGF SISFFIPMLYENDKKAGSYANDLRIGICRKKLFFAKYLFIFILLLTIEGIALLPFLLFLY FYGIKILISDLEVYTMIGSVGLISMVPFYQFLSLKFDYTGSILPGTIFTLAAVLLGTTDL GSGIWYYFPFVYPIRLLYGYVCHSFNLNTIIFYLFLSFFISFVSVSICSFWYNQWDGISK MEE >gi|333758476|gb|AFIH01000001.1| GENE 845 805408 - 805506 71 32 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNAVFVGLALSVMVYILITVLNIGMERGKSHV >gi|333758476|gb|AFIH01000001.1| GENE 846 805469 - 805552 65 27 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTLNANPTNTAFIDVNGDDFSKKVPLG >gi|333758476|gb|AFIH01000001.1| GENE 847 805668 - 806162 191 164 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|329117448|ref|ZP_08246165.1| ## NR: gi|329117448|ref|ZP_08246165.1| lantibiotic protection ABC transporter, permease subunit, MutE/EpiE family [Streptococcus parauberis NCFD 2020] lantibiotic protection ABC transporter, permease subunit, MutE/EpiE family [Streptococcus parauberis NCFD 2020] # 1 162 1 162 251 152 57.0 6e-36 MIKMLKVEWIKEKRAANSTLKYIVPVIFLLFNLFMVNLMGQSPEGRSYLMATAFNWYPVL ILPIVLSLLVVNIVSKEKEEHLAFQRRLNLSVEKILIAKNEMVILELFVILILSSIGIYL VGRFFLQEEISLKIMFLGTCCLFVGSLPIIALSFLFINYLTKSI >gi|333758476|gb|AFIH01000001.1| GENE 848 806155 - 806859 288 234 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 1 204 1 212 305 115 36 8e-24 MSILLETKGLTKKYKNGIALNHVSIQVEKGTVYGLLGPNGAGKSTLLKIITRSIPKSSGE VIFENHPLNTNDVKNIGAIIEHPAIYPNLTAYENLEVITTLLNIDRQKIDEVLMMVSLTN TGKKLAKEFSLGMQQRLGIAMALINSPSLLILDEPTNGLDPLGIQELRELIKMLSGQGIT IILSSHILSEVGQIADRIGIINKGLLRYEGQNTNPSKLENLFMEIVRKDVMNND >gi|333758476|gb|AFIH01000001.1| GENE 849 807140 - 808645 1301 501 aa, chain + ## HITS:1 COG:MTH196 KEGG:ns NR:ns ## COG: MTH196 COG1672 # Protein_GI_number: 15678224 # Func_class: R General function prediction only # Function: Predicted ATPase (AAA+ superfamily) # Organism: Methanothermobacter thermautotrophicus # 3 428 2 420 458 242 37.0 1e-63 MRFIGRAFELRELEEEYGKGTFALSVIYGRRRVGKTYLIKEFLKRKRGYYFVALESNALI NLSLLSQAIYEACGNLKGLPDFQDFEAALRYLFAYGEEHRIVFVIDEYPYLAQSAEHISS LLQKLIDEYREKSRLFLILCGSSMSFMENQVLGYKSPLYGRRTSQLKVQPFGYLEAAEFV ASYSYRDKAIVYGITGGIAEYLSFFDENVDLKSNIIRNFLKSSGRLFEEPDNLLKQELRQ PKLYNDILFVISAGASKLNEIATKLNMQSGGLSHYLNSLLELGIIEKKTPVLDRKSKRPI YRIKDTMFRFWYCFVQKNMNLLNMDLGELVYEKQIEPKLNEYMGTVFEQIVIEYFEQRLG KGELDFLSEDYGNWWGTDKIRKKESEIDLLAFDGKDRYLFAEVKWRNQKIDAVVYQELLE KAKPFPAKNKSYWLVSLSGFEDFPVEKNTERITLEQIYEIGRQSVDPFYSESNMRSLKKS IKELHDGKGKVHELIEVDHEN >gi|333758476|gb|AFIH01000001.1| GENE 850 808762 - 809016 320 84 aa, chain + ## HITS:1 COG:no KEGG:Intca_2979 NR:ns ## KEGG: Intca_2979 # Name: not_defined # Def: prevent-host-death family protein # Organism: I.calvum # Pathway: not_defined # 1 72 2 72 81 79 56.0 3e-14 MTSISITKVRANLYQTVSEVNESSQPITITNNRGKNAVLIGEEDWKAIQETLYLNSIPGL SQSILASKEEDLSECTSYDPNEEW >gi|333758476|gb|AFIH01000001.1| GENE 851 809016 - 809312 177 98 aa, chain + ## HITS:1 COG:RC0291 KEGG:ns NR:ns ## COG: RC0291 COG4115 # Protein_GI_number: 15892214 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Rickettsia conorii # 1 95 1 86 86 85 47.0 2e-17 MYLIKFSKNADKDKKLLKSAGLEKKAKLLLDIIAEDPFKNPPAYESLLGNLSGFYSRRIN IQHRLVYTVYAEQLMENNVSYEGIVQVARMWTHYEGIR >gi|333758476|gb|AFIH01000001.1| GENE 852 809399 - 809779 346 126 aa, chain + ## HITS:1 COG:no KEGG:bpr_I2654 NR:ns ## KEGG: bpr_I2654 # Name: not_defined # Def: hypothetical protein # Organism: B.proteoclasticus # Pathway: not_defined # 4 122 2 120 130 79 40.0 3e-14 MKQSLEEKQSLAMEGLASGKNCGQLVLLAYQEELNLPEELLLSLSAGLIEGLGTLEGTCG ALIGANLVLAMKNKGNPMVQVEAAHLFQDFEKRCGASICKDLRGIGKEKPLCSCEDCIKE AIALLY >gi|333758476|gb|AFIH01000001.1| GENE 853 809793 - 810389 408 198 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164512|ref|YP_001467500.1| 50S ribosomal protein L24 (BL23; 12 kDa DNA-binding protein; HPB12) [Campylobacter concisus 13826] # 3 180 4 181 185 161 45 1e-37 MACQWKNSSAEMISYHDKEWGVPTHEDQKLFEYLLLESMQAGLSWALILRKRETFRSSFA GFSPEKVAAFTEEDIARIMHTENMIKSERKIRAMIQNAKAFLALQKEEGSFDSYLWSFSG GKSLCYRGHEKGEMPAKNTLSETISKDLKKRGFQYTGPVIVYSFLQACGVINDHEENCPC YQALRKAYPYQEVEERIP >gi|333758476|gb|AFIH01000001.1| GENE 854 810534 - 810755 374 73 aa, chain + ## HITS:1 COG:no KEGG:Selsp_1987 NR:ns ## KEGG: Selsp_1987 # Name: not_defined # Def: hypothetical protein # Organism: S.sputigena # Pathway: not_defined # 1 54 1 54 73 72 75.0 5e-12 MAFSIRMNEEEKALAESYAKLHAMSLGEAFKRALFERIEEEYDISLANEAYQEYKNTGCK SRPIEELWKELNL >gi|333758476|gb|AFIH01000001.1| GENE 855 810752 - 811021 177 89 aa, chain + ## HITS:1 COG:FN0497 KEGG:ns NR:ns ## COG: FN0497 COG2026 # Protein_GI_number: 19703832 # Func_class: J Translation, ribosomal structure and biogenesis; D Cell cycle control, cell division, chromosome partitioning # Function: Cytotoxic translational repressor of toxin-antitoxin stability system # Organism: Fusobacterium nucleatum # 3 87 4 88 90 94 54.0 4e-20 MSYHVETTARFDKEFKKLDKYTQQMIKSWIVKNLQNCENPRAHGKGLTANKSGQWRYRIG DYRLLCLIQDEELVILALTAGHRRDIYST >gi|333758476|gb|AFIH01000001.1| GENE 856 811236 - 812144 905 302 aa, chain + ## HITS:1 COG:SP1751 KEGG:ns NR:ns ## COG: SP1751 COG0598 # Protein_GI_number: 15901583 # Func_class: P Inorganic ion transport and metabolism # Function: Mg2+ and Co2+ transporters # Organism: Streptococcus pneumoniae TIGR4 # 1 301 1 301 302 321 60.0 1e-87 MQVSKKLSNIATWINIDSQEITEKFKIYEEYDIDPKIIDYALDENEHAHMDYDREDGTVT FIYSVLESKKDKEYYETVPMTFIVQKNRLLTISNEDNDYIIQKMCSYVDTNEELSIYTLL FAGLEMISNAYYPVIERLDKQKDEINHLLRKKTTKRNLYALSDLEVGMIYLHSAATQNRL LLEHIQAHAIYRSFNEEEMAQFDDAMVEARQLVSMTELLSTVARQLLDSYNNILNNDLNN NLSTLTIFEILLSVLAVITGFFGMNVPLPLMNDRKAWVLICGVSALIWIALTWIMRWIIK RR >gi|333758476|gb|AFIH01000001.1| GENE 857 812163 - 812300 144 45 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227873864|ref|ZP_03992086.1| ## NR: gi|227873864|ref|ZP_03992086.1| ECF subfamily RNA polymerase sigma-24 factor [Oribacterium sinus F0268] ECF subfamily RNA polymerase sigma-24 factor [Oribacterium sinus F0268] # 1 45 1 45 184 76 91.0 7e-13 MEDQKIIALYFQRAETAITESKNKYSRLLLSISYGILKIMADAVE >gi|333758476|gb|AFIH01000001.1| GENE 858 812537 - 813148 473 203 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent [Streptococcus pneumoniae TIGR4] # 6 200 7 197 201 186 47 3e-45 MFEQVKLDYTFEALEPHIDTLTMETHYGKHHATYTKNFNDAVEKAGLSGKSVEEILSSLS SVSDEALRNALQNNGGGYYNHNLYFSTMSPKKNTKPDSELEEAIKRDFGSLEKLQELLQT LALGQFGSGWAFLAADKEGKLYATKSPNQNNPLMEEGHHTPILAIDVWEHAYYLKYKNLR GEYLQNFFAVLDWEKVSENYRNR >gi|333758476|gb|AFIH01000001.1| GENE 859 813388 - 813813 370 141 aa, chain - ## HITS:1 COG:BS_xynAa KEGG:ns NR:ns ## COG: BS_xynAa COG2314 # Protein_GI_number: 18677777 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Bacillus subtilis # 73 137 5 69 79 79 64.0 2e-15 MAENKCPQCGAPLDPQATECKFCGEKLAVQQAAQQFQQQSQQYQQQVQPQVVIQQVAPQP VYYSAINPAWPVKSKVVAGILALLLGGLGIHKFYLGKIGMGILYLLFCWTGIPAIIGFIE GLIYLCSSDENFQLKHHVRIV >gi|333758476|gb|AFIH01000001.1| GENE 860 813835 - 814209 319 124 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQKKALTIGLSAFATIFYFVIILYIFFAILHIDALKNFETALAFELIGFILLLYFILGNI ILKPIKTGFYIPLLITTVAYTVLLDGLNIAFIVTMPNAYFVLVHLILLFIYCIISIPMYI MGRR >gi|333758476|gb|AFIH01000001.1| GENE 861 814209 - 815255 895 348 aa, chain - ## HITS:1 COG:RSp1296 KEGG:ns NR:ns ## COG: RSp1296 COG4260 # Protein_GI_number: 17549515 # Func_class: S Function unknown # Function: Putative virion core protein (lumpy skin disease virus) # Organism: Ralstonia solanacearum # 18 248 25 245 343 110 29.0 5e-24 MAFINLVRFDGLKSRDWLIYKYPSEDLVLGTQLIVQEGQAAVFVKSGLVADVFYPGTYTL ATENLPLLKGLINLPFGGRTPFSAEIYFVNTTVRLDIHWGTNDPIQLIDPKYYVKLRIRA FGQMGLRVLDAVRLFKELIGGMQQADIVKFDKIKEYYRGLLVIKAKSAIAETIINNGISA LEISAKLEEISLKVENQIAPEFEKYGFTVINFFVQSINFPDEDFEKINKILEDKAAFEIM GEGRYVTKRSFDVYEGAANNKSGVAGAFAAGGIGLGAAMNMGAAMGQTVGNPIRREETKT CVSCGAQIPIKSKFCPECGFNNSEIICSCGNKLAPGAKFCPECGKKVE >gi|333758476|gb|AFIH01000001.1| GENE 862 815807 - 816346 433 179 aa, chain + ## HITS:1 COG:BH1333 KEGG:ns NR:ns ## COG: BH1333 COG1555 # Protein_GI_number: 15613896 # Func_class: L Replication, recombination and repair # Function: DNA uptake protein and related DNA-binding proteins # Organism: Bacillus halodurans # 69 172 91 203 210 72 43.0 4e-13 MVPKGKKWIRKGKFCLLLFLLCSLLYLFLSVKESGEKVLYQGRAGEQSEAAEATEKETDV MEKETDAIEKEIDAMEKKTESAAENSSHAIQDSEDETENGSVKEQVKELVSEKKSGKINI NTATSEELQSLKGIGPSTASSIIAYREEYGGFSSIEEIMNVKRIGEKTFAKIKDRISVD >gi|333758476|gb|AFIH01000001.1| GENE 863 816570 - 817772 938 400 aa, chain + ## HITS:1 COG:CAC1267 KEGG:ns NR:ns ## COG: CAC1267 COG1686 # Protein_GI_number: 15894549 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Clostridium acetobutylicum # 148 321 32 204 425 119 40.0 1e-26 MDKGNQQDIARFAHDTRYELNESTLPEKRTGKSFLKRKRIGRSVSILLSLSLLLPFASFS EERVYGISDYGPVSVNGNGVGRGNDPTYRYIEDILYENGKTATGGNASPAANNGNGNTSP SATQTPALLRNLAQLSNTSATKNLSTEIDAAYAVVFDLDNGSILGEKNASQVMNPASMTK VMTLLLCAEKLSDKNKKLTITQDIVSYIQQRGASNCGFVVGEEVPVKDLLYGVILPSGAD AVLALCKEVAGSEAAFAELMNKRAKEMGLSNQCHFQNATGLYHSTHHMTVKDMGQIMAVA MQNPTAREVLMTENYQIAPTNKHPQGLKFTNLFLQRIKTLDSGGANVQMAKTGYVSQSKF CVVSSGKGKNGKNLLVVTGGSSATWQAVRDQAALYKLFGL >gi|333758476|gb|AFIH01000001.1| GENE 864 817805 - 818788 870 327 aa, chain + ## HITS:1 COG:BH2280 KEGG:ns NR:ns ## COG: BH2280 COG1897 # Protein_GI_number: 15614843 # Func_class: E Amino acid transport and metabolism # Function: Homoserine trans-succinylase # Organism: Bacillus halodurans # 1 300 1 301 303 348 55.0 1e-95 MPIKVQNNLPAKPILEAENIFVMDENRAISQNIRPLKIVILNLMPLKEDTELDLLRVLSN FPIQTEISFMKVSTYKSTHTSSTHLNAFYLEFKDVQEDYFDGFIITGAPVEKMDFSEVEY WKELEEIMDWSKTHVFSTFHICWGAQAGLFHHYGIRKVLLEKKLSGVYKHRVLHRKKMLM RGMDDEFFVPQSRYTGLDEEALKNNKELYVVADSEECGSYIILACSSRQIFVTGHSEYDR YDLDKEYKRDLGRGLNPDVPVNYYPDNDPEKKPILSWRSGSNCIYSNWLNFVYQETPYVL EDLRPVSEDSYLREDHWSERDGTVSST >gi|333758476|gb|AFIH01000001.1| GENE 865 818819 - 820057 1302 412 aa, chain + ## HITS:1 COG:CAC0476 KEGG:ns NR:ns ## COG: CAC0476 COG2195 # Protein_GI_number: 15893767 # Func_class: E Amino acid transport and metabolism # Function: Di- and tripeptidases # Organism: Clostridium acetobutylicum # 2 405 3 403 408 432 54.0 1e-121 MDAVERLISYLKIDTESVPDRDVIPSSEKQFDLAKVLEKELREMGVSDVRLDEHCYVYGK LPSNLSGEEKAKTPALGLIAHMDTSPSARGKNVNPRIVKNYDGTDIVLNEEEKLSPKIFP RLLEQVGDDLLVTDGTTLLGADDKAGVAEIMALVEYLQKHKEIPHGDICIGFTPDEEVGC GADIFDVKGFGADVAYTVDGGKLGGVEYENFNGASGKLKIHGVNVHPGSAKDKMLNSLLL AMEFNSMLPQFTPANTEGYEGFFHLCDMAGDESLTEMNYIIRDHDREKFEEKKRIFLDVA EKLNQKYNAKGAFFEPEVKDSYFNMAEKVKDHMYLIDVAKTAFEKEGITPIVSPIRGGTD GASLSYKGLPCPNLSTGGDNFHGIYEYLNLNAFHKMIAVLIQITQEMIGKKA >gi|333758476|gb|AFIH01000001.1| GENE 866 820843 - 821436 389 197 aa, chain + ## HITS:1 COG:BH1417 KEGG:ns NR:ns ## COG: BH1417 COG0212 # Protein_GI_number: 15613980 # Func_class: H Coenzyme transport and metabolism # Function: 5-formyltetrahydrofolate cyclo-ligase # Organism: Bacillus halodurans # 9 189 2 182 186 102 32.0 6e-22 MFSVFKIKEEKKVLREQVKELRAHFTGEEMEKANVEMQTRLLLFPYFQSAESIFCYVSMD NEPSTGEILSTAFSSGKSVYVPRCLPGKERIMEAVEIHAWDDLKKGTMGILEPKKEIKGT DRKDFSLMLIPCLATDRRGGRLGHGAGYYDRFLEGAVGKKLCLCFDSLLFSKIPMGRQDI FMDYVLTEKELILCGKR >gi|333758476|gb|AFIH01000001.1| GENE 867 821456 - 822547 253 363 aa, chain - ## HITS:1 COG:CAC1266 KEGG:ns NR:ns ## COG: CAC1266 COG0564 # Protein_GI_number: 15894548 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthases, 23S RNA-specific # Organism: Clostridium acetobutylicum # 7 361 5 295 299 155 32.0 9e-38 MQGNLRKLHYTIDKSFHGKTVEAFLRAEGYTKSLITGLKKIDYEEGGKKHYGIEKNGKWA FTIDKLEEGDQLDISVIETGSEVSAPAFPLPLDIVYEDEDILLLNKPAFLPSHPSPGHYE KTLAGAITHYYIEEKKQASFVCRMVHRLDLDTSGLLLVAKNLYSSSFLNEEMRAGRIRRT YAALCKGNPLSAFPDKNLPEGDTGEKSSFLPGLTRVGTFLRIEAPIERIERGKMRRKVDF ESGQDAVTNILSVKYNPDRNFSLLQLELETGRTHQIRVHLSYVGCPLLGDSLYGEALSNE IAHALPTKLVKNKNNVGDAFTNALHRQALHSQSISFFHPESRKEMHFEIPLPKDMADFLA EKE >gi|333758476|gb|AFIH01000001.1| GENE 868 822549 - 823151 486 200 aa, chain - ## HITS:1 COG:CAC2331 KEGG:ns NR:ns ## COG: CAC2331 COG1898 # Protein_GI_number: 15895598 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes # Organism: Clostridium acetobutylicum # 1 196 1 180 185 229 58.0 2e-60 MGQIQIEKTNIEGLCIITPTVHKDSRGYFMESYNERDFQESGLDLRFVQDNQSMSQKGVL RGLHFQKQYPQGKLVRVLKGRVYDVAVDLRKHSATFGKHFGIILTEENKKMFYIPEGFAH GFLVLSDTAEFAYKVTDFYHPGDEGGLAWNDPEIAIAWPELKGDYKGNAGSAGYTMEDGS PLLLSEKDELWLPLKESFTF >gi|333758476|gb|AFIH01000001.1| GENE 869 823346 - 823771 414 141 aa, chain + ## HITS:1 COG:BH0951 KEGG:ns NR:ns ## COG: BH0951 COG0735 # Protein_GI_number: 15613514 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Bacillus halodurans # 6 123 23 140 145 89 35.0 2e-18 MNYSRQRAEVLDQIREHKDHPTADTIFAELRTKDPSISLATVYRNLKLLSELGEIRRLTF VSGADRFDPTVQTHYHFVCEKCGRVYDVPMKVAEALDSDAEQYIRGTVTGHDLVFRGICD ECRALEGAKLTTGVEVKEHTV >gi|333758476|gb|AFIH01000001.1| GENE 870 823854 - 824399 639 181 aa, chain + ## HITS:1 COG:CAC3598 KEGG:ns NR:ns ## COG: CAC3598 COG1592 # Protein_GI_number: 15896832 # Func_class: C Energy production and conversion # Function: Rubrerythrin # Organism: Clostridium acetobutylicum # 1 179 1 180 181 213 65.0 1e-55 MKTWVCSVCGYVFEGEAAPAQCPVCKAGSDKFVEQSGELTWAAEHVIGVAKDVPEDIKKD LRANFEGECCEVGMYLAMSRAAYREGYPEVGDYYRQAAFEEADHASRFAELLGEVVSAST KENLEARVKAENGATAGKVDLAKRAKALDLDAIHDTVHEMARDEARHGKAFYGLLKRYFN K >gi|333758476|gb|AFIH01000001.1| GENE 871 824672 - 825220 616 182 aa, chain + ## HITS:1 COG:CAC2575 KEGG:ns NR:ns ## COG: CAC2575 COG1592 # Protein_GI_number: 15895835 # Func_class: C Energy production and conversion # Function: Rubrerythrin # Organism: Clostridium acetobutylicum # 1 182 1 195 195 169 48.0 2e-42 MANYKGTETEKNLWTAFAGESQARAKYTYYASQAKKDGYQQIAAILEETAANEEYHGKMW FKELAGLGGGIGNTAENLKAASEGEHYEWTEMYKNFAEVAEKEGFKELAAKFRLVGQVEK EHDARFQELLQRVLDNTTFKEEKQTLWHCRNCGFIYEGEEAPEVCPCCNHPKAYFERKAD NY >gi|333758476|gb|AFIH01000001.1| GENE 872 825570 - 827102 1563 510 aa, chain + ## HITS:1 COG:CAC0712 KEGG:ns NR:ns ## COG: CAC0712 COG0696 # Protein_GI_number: 15894000 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglyceromutase # Organism: Clostridium acetobutylicum # 2 509 3 510 510 589 61.0 1e-168 MKKPTVLLILDGYGERKEKDGNAIALANTPVMDKLKKEFPYVEGQASGLFVGLPDGQMGN SEVGHMNMGAGRIVYQELTRITKAIEDGDFFENKALKEAVEHCKKENSALHFMGLVSSGG VHSHIGHIYGLLELAKREGLKKVYLHAFLDGRDTPPDSGKSFLMDVEKKMRELGVGEIAT ISGRYYAMDRDKNYDRVEKAYRAMVDGTGEKASSVEEAIDASYEKKVYDEFVLPTVIEKD GAVHTVSDGDAMIFFNFRPDRAREICHAFCDDEFNFFNRGPRKKVFFVCFTDYDPTIPNK RVAFEKEEIHNTLGEVVSNLGKNQLRIAETEKYAHVTFFFNGGKEEPYENEDRILVPSPK EVPTYDLKPEMSCYTVTEKLTEAIRSGKYDLVVANFANPDMVGHTGVLSAAIKAIEVVDE CMGKVVDAVESMHGNLFILADHGNADIMIDEKTGEPYTAHTTNPVPFILVSEEKHKLREG GCLADVAPTLLELMGIPQPKEMTGKSLLEK >gi|333758476|gb|AFIH01000001.1| GENE 873 827175 - 828062 897 295 aa, chain + ## HITS:1 COG:BH3627 KEGG:ns NR:ns ## COG: BH3627 COG1307 # Protein_GI_number: 15616189 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 2 283 3 276 283 114 30.0 3e-25 MKIGICTDSGSGITPEEGKRLGITVVPMPFRMGEEEYFEDINMSREEFFKRLLSGESVST SQPAMKSVLEAWDRLLEENEEVVHIPLSSGLSGSTQTAIMLSQDEPYLGRVYVPDSRGVS VTQRMHCVFAKMLGEKGYNGQQIRDILNRAPGENGIYIGVQNLSYLKCGGRITPVAAAIG TLLQIKPVLAINEGGKLDSYKKVRTERQVREAIMEGLHQTLSRLDDPEARQSCIAVAYTD NREQAENFKEQLMAEFPNRYDPEIVVNPLSLLISCHIGENGLGAAVIKRPKELLD >gi|333758476|gb|AFIH01000001.1| GENE 874 828155 - 828631 108 158 aa, chain - ## HITS:1 COG:BH3961 KEGG:ns NR:ns ## COG: BH3961 COG2333 # Protein_GI_number: 15616523 # Func_class: R General function prediction only # Function: Predicted hydrolase (metallo-beta-lactamase superfamily) # Organism: Bacillus halodurans # 32 153 176 293 295 89 40.0 3e-18 MHSLDVMNHKAEEKTSLSLHCYYPVSDCPMEEANAHSIGCILRYGNFSMVFTGDMPAEAE KEMLYAIKKEGQSPSVDIVKLAHHGSKTSSSPLFLSETKGKFALFSYGKKNRYGHPHKIT LEKCNSFGLIPLETAKLGEILIRTDGEDYQIITPCTPP >gi|333758476|gb|AFIH01000001.1| GENE 875 828772 - 830895 512 707 aa, chain - ## HITS:1 COG:all1983_1 KEGG:ns NR:ns ## COG: all1983_1 COG0658 # Protein_GI_number: 17229475 # Func_class: R General function prediction only # Function: Predicted membrane metal-binding protein # Organism: Nostoc sp. PCC 7120 # 122 550 143 529 612 85 24.0 2e-16 MFTARPLFSLALSVLFGELLLCPEIPLSLRFILLLAYLFYLKLILQKKKQTILLLSLFLF FFSSLHFQLVLSRFERQQRAIEQLLPFRCALKGTISYISENEKNYKISLENCLLDSSFGA IPKNLNEEQSKKWKARNHLPFQKIQVYLKKSETAEGKGEAKDDIAAKPPFYPGETILLHG KCLEIHSAMNEGEFSFLQYAKGEGIEAIFLAESSKTIASDSSPFLKLLYEIRWRISKDLE HLYPDPESTDRSSVSSPMNKSAFLKSLLLGEKSTLPEEERNLYQEAGIGHILAVSGLHLS LVGGACFSLLRFSGMEISSASLLSSFFILSYALFTGASGSTLRAAIMLFISLFGKCIGRG QDRISSLSLAIFLLLSFHPLYLYSSGFQCSFFTLFLLLLLSEREGKEERKLLSKKWEKAV KKRKFQSLILLLPSKCFEASKALFLFYLGLFPIFAILQYSFPTFAPLLNLLLLPLLPFFF LLGFLSVLFLHLPFVSFLSGFFAHVLSVLLTFFHRLIEISLQLPYSSILLGKMKLSSLFF YLFFYYVLFLFPFKRRLKFFRITACSHRTNNPIPFFIILDFPIFKKNLRKIRILSYLLFL LSVPFFLPIPSRKLEITALYVGQGDGFLIQKGNFVFTIDNGSSSDKQFGKNTLIPYCKAK RIRRIRYALITHSDIDHTSGIQRILEENPASTATNFFIRKIDSILKI >gi|333758476|gb|AFIH01000001.1| GENE 876 831298 - 831561 369 87 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227874465|ref|ZP_03992641.1| ribosomal protein S20 [Oribacterium sinus F0268] # 1 86 8 93 94 146 87 3e-33 MANIKSAKKRIQVAAQRNERNKAIRSEVKTYMKKVFVACENGDKETANTMLVKAQKKIAM ARSKGVYKANNASRKTAQLYNAINKMA >gi|333758476|gb|AFIH01000001.1| GENE 877 831868 - 834855 1737 995 aa, chain + ## HITS:1 COG:SP1937 KEGG:ns NR:ns ## COG: SP1937 COG5263 # Protein_GI_number: 15901761 # Func_class: R General function prediction only # Function: FOG: Glucan-binding domain (YG repeat) # Organism: Streptococcus pneumoniae TIGR4 # 863 990 178 299 318 98 38.0 7e-20 MRKSIKTALAFLLAVSYICSTVASATTLAGETILSEGIDYAAQGSESKWEAEPAQESESM RETESTQGTESAQETESTQETESTQETETTEEAFYAEKELSGVLVTVQADSGVFPKGATL RVRKLSKVEEQKVDSTVKEKLQENQENLLQSMIFDISVLNQEGEEVQPDTAKGEATVQFS NIPFLQEDAEKQISVFHLDSVDAAAEKLAAEKIEEKESAVEVSAEHFSLFAVSLVRKGNS FSDTIAVELGDTISLYKLLPYDVLRCEAMKETDPAVIRLKHDEDGEIAIEALHEGTARLL LTVKDDFIQEKQEYRIIVQKASLSGRAGKEMEYSLSGSGNDMTLTLRGRGETDAFELAPW EPYRDKIRRVIIEEGIEKLHVEVEAFGSMEHLETVSLPSTLKEIPDHAFYHSENLSDVTI PASVKRIGRQAFYKSKGNGKKNTIINHSSVLMSEKGSEQYNPAFTSVQQTAGEEEQEVKK WNISLKNVHFYTLPEINKCFFELETEGNEYANFYLYTTEDPSEAVTVKNFTDDSGSFKRD LMLTFFPRGNGWRVPGTNKTFTSYLLDFRDTGLFSFLPGHTYYCTFLISPGGITKPYSET QLLQKVVTVSDEARLPRNDGNFSWQLTGEKSPYTLTIEGSGRMQGLTANGELRSWTKLLH VLGREAHLELKGNITALDSHALDGITYIKKGLVLPDSIVEIGDSVFSKKSIEGNLVFPKN LKKIGNSAFRHLSYKGNLSLPEGLESIGESAFRDLKESNAITIPASVTHIGIGAFYKDKM SFKGKNSIANHSSVKLGTRYVNPLFTEYTPDDSGEAPIPSYSGNGGGSSGRGGSSGGGSS SGGNSGTPMVLGADRNLPSIVNWQRDAKGWWILNPDGTYPKAQWLLLNNRWYYFNQEGYM FTGWLFYNNAWYYFEEKEGSEQGKMSVGWKELHGFWYYFSEEAGTESGKMRTGWQEVKGK WYYLNPKSGAENGKMLFNTKVQGYTLGADGAWQKI >gi|333758476|gb|AFIH01000001.1| GENE 878 834974 - 836788 2097 604 aa, chain + ## HITS:1 COG:CAC1278 KEGG:ns NR:ns ## COG: CAC1278 COG0481 # Protein_GI_number: 15894560 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane GTPase LepA # Organism: Clostridium acetobutylicum # 1 602 1 602 602 848 68.0 0 MEKIQQDRIRNFCIIAHIDHGKSTLADRIIEKTGTLTEREMQAQVLDNMDIERERGITIK SQTVRIVYKAKDGKEYIFNLIDTPGHVDFNYEVSRALAACDGAILVVDATQGIQAQTLAN TYLALDHDLEIIPVINKVDLPSADPELVAHEIEDVIGLEAMDAPQISAKTGLNVEEVLEA VVHRLPAPKGSPENPLQALVFDSLYDSYRGVIIFMRIKEGRVKKGDAIRFMATGAEFTVT EVGTFAPGQFIPAEELSSGMVGYLTASIKNIRDARVGDTVTSVMHPAKEALPGYKKVLSM VYCGIYPSDSQKYPDLRDALEKLQLNDAALQYEPETSAALGFGFRCGFLGLLHLDVVQER LEREYDLDLVTTAPSVIYHVYKTDGSMIELTNPSNLPDPAEILRMEEPIVEAEVMVTSEF VGAIMTLCQERRGVYKSTEYIDKTRALLKYDLPLNEIIYDFFDALKSRSKGYASFDYTLK GYQEGKMVKLDILVNKQQIDALSFIVHADSAYERGKKMCEKLKNEIPRQLFEIPIQAAIG GHIVARETIKALRKDVLAKCYGGDVSRKKKLLEKQKEGKKRMRQFGNVEIPQSAFMSVLK LDED >gi|333758476|gb|AFIH01000001.1| GENE 879 837025 - 837963 919 312 aa, chain - ## HITS:1 COG:DRA0143 KEGG:ns NR:ns ## COG: DRA0143 COG1250 # Protein_GI_number: 15807812 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyacyl-CoA dehydrogenase # Organism: Deinococcus radiodurans # 3 311 55 335 347 251 45.0 1e-66 MFKNVTVAGGGVLGSQIAFQTAYCGFQVKIWLRTEASIERCKPKLDRLRVVYLSILDEMK SGNPAAYARGLSKKYPLSEAEIEDCKKKVEEAYKNIILTTSYEEAAKDTDLVIEAIAENI EEKESFYTELAKHLPEKTVLVTNSSTLLPSTFAKYTGRPEKFLALHFANNIYKSNTAEVM GHAGTEQKYYDAVVSFADEINMVPLKVLKEQPGYILNSMLVPFLTAAESLLALGVADFET IDKTWKLGTGSPYGPFQILDIVGLTTAYNIVILNPAAKDPNSVQGKIAATLKEKIDQGKT GISAGEGFYKYK >gi|333758476|gb|AFIH01000001.1| GENE 880 838355 - 839377 835 340 aa, chain + ## HITS:1 COG:CAC1479 KEGG:ns NR:ns ## COG: CAC1479 COG0115 # Protein_GI_number: 15894758 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase # Organism: Clostridium acetobutylicum # 3 339 4 340 341 443 61.0 1e-124 MAEKLDYSNLGFAYHTPEKRYVSNYKGGSWDEGGLSSDSNVVLNESAGILQYCQQVFEGL KAYRWKDGSVVCFRPDLNAERMFHSAAFLEMPSFPVERFLSALDEVVRANVDSVPPYGTG GSLYIRPYLFASGIVIGVQPAEEYQFRIFTTPVGPYFKGGATPIALMVSDFDRAAPHGTG AVKAGLNYAMSLHSHEIAKKKGFAENIYLDAAKREFVEETGGANILFVDKEGKLVIPKSD SILPSITRRSLIYVAEHILHIPVEERQVRFSEVPNFVECGLCGTAAVISPVGKIRDHERE ILFPSGMEKPGEVTAKLYETLSGIQNGEVPAPEGWIRKIL >gi|333758476|gb|AFIH01000001.1| GENE 881 839541 - 840857 662 438 aa, chain - ## HITS:1 COG:CAC1279 KEGG:ns NR:ns ## COG: CAC1279 COG0635 # Protein_GI_number: 15894561 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Clostridium acetobutylicum # 19 438 4 373 374 256 36.0 8e-68 MDKFKRLTDSLEKRGKKPLALYIHIPFCARKCGYCDFLSFPSTEEKMRSYMEQLRRELLF RAGKPGADCSDDTEYLLHSQYEIVSIFFGGGTPSIVPFSEIEKTMEMVRKHYPLTENPEI TIECNPSSTMKLALLSYKRAGINRISFGLQSTNDEELEFLGRTHRYNDFLRAYQDARLSG FDNISIDLINGIPLQTVESYTRTLKNIHMLRPEHLSVYNLIVEPGTRFYHLQKEGKLPLP SEDELVNMDKLTLEWTAKMGMERYEISNFAKPDYFSLHNFNYWSDVPYLGFGIGASSYFQ KSRWQNCNNVRKYMDIPFPMEEDRRLNITQTANTSTGMCKETASSPEKQNQIEKELTTDR HALSKKEQMEEFFFLGLRRTEGITEMDFVARFSVDMHQLYGEVLSQLVKEGYLIHQNSRY YFTEEGLDLSNQLLARFL >gi|333758476|gb|AFIH01000001.1| GENE 882 840922 - 841950 702 342 aa, chain + ## HITS:1 COG:BS_yqeN KEGG:ns NR:ns ## COG: BS_yqeN COG1466 # Protein_GI_number: 16079610 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, delta subunit # Organism: Bacillus subtilis # 20 322 7 322 347 106 27.0 6e-23 MDVKREEREAFAKAQKTLLEELKSGEFHPLYLLYGEERYLLSYYKKLFLKAFSENEGINI TQIEENLETKNLIDTAETLPFFAPYRLMLFDGKIGGKKKLSDDFVQYLKTSPQTTVMLFL EEKVDKRSSFYKTVKDRGLILPCTVQDADFLERFAFQFFKKEKKQITRPLLQKLLERTGN NMYRIEAECQKVISFLGEEIEVTEESIELSVKKLPEDKIFDLIEALGRGNRETLFRYYGD LLQLEESPTKIRSMIKNNVTKLLIVREMLTEGGAERDIAQALSMEPWRVRRFCSEARSYT LEALEDLMHALLRLEEEIRQGKIAEQLALEVLLCGEEKDYFS >gi|333758476|gb|AFIH01000001.1| GENE 883 842056 - 842535 485 159 aa, chain + ## HITS:1 COG:no KEGG:Closa_0879 NR:ns ## KEGG: Closa_0879 # Name: not_defined # Def: 3D domain protein # Organism: C.saccharolyticum # Pathway: not_defined # 62 157 91 188 188 81 45.0 1e-14 MLKIGKEKLSLFFALAFILFSFPMTSLAEGQSAPQGKGEIIEYDLNPESGAANEAISESQ GYTKGASLGTFQLVGYSGDGMTYSGAPTKANHTVAADLKVLPLGTKIFIGDTVYTVEDIG SGVKGKMVDIYFSTMEEARALTRSGRVYSEVYVAVPKSE >gi|333758476|gb|AFIH01000001.1| GENE 884 842582 - 843109 405 175 aa, chain + ## HITS:1 COG:no KEGG:Closa_0878 NR:ns ## KEGG: Closa_0878 # Name: not_defined # Def: 3D domain protein # Organism: C.saccharolyticum # Pathway: not_defined # 77 159 141 223 240 105 55.0 5e-22 MYIEKRKMLVSAVLFCLFTLCSLKTVKAESVIGSYTTESLGDVLYFSTEGTEKTEVEKQA EKAVLEKDSGTDGSGVAGTALTPLGTFKITGYCPCYSCSEGYGRRTASGKLAKAGRTVAV DPRVIPLGTRLLIDGQEYIAEDVGGAVKNNHIDIFFDSHKVAHQTLRYTQVYRIG >gi|333758476|gb|AFIH01000001.1| GENE 885 843210 - 845027 837 605 aa, chain + ## HITS:1 COG:CAC1003 KEGG:ns NR:ns ## COG: CAC1003 COG0210 # Protein_GI_number: 15894290 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Clostridium acetobutylicum # 28 600 96 670 732 251 30.0 3e-66 MAFTKEQEKAISSQARAVLVVAGPGSGKTTVLTERLVYLLKNATDSGSCLLLSFTRASSK EMALRFRKRGLSGVSPHFSTIHALCLSLLKEGRGVGKENLVDLYEKMDWISRYFLEQGIA REEVEELLPNYCNQISYFKSITEEERLAFLREEKNENFLPLFQYYEMMRKKRSKLDFEDL LIEVLLELQKNTDLAELWKRRYTHILVDEFQDLSLIQYAILKGLAERGASLFVVGDEDQS IYGFRGASPDILFRFEKDFPFCEKIFLQDNFRSKEEIVELSSRLIGKNKERFRKNLFGRQ GRGGRAKYYIVESTAEEGRLIAEHVETCLKEGCRPEEIAILFRSKNQIPALLPEFLERNI PVVVYEEVNNVFQHFIGKDILAYLRLGMNPENGSDLIQILSKPYRGLRREKILHENAGLK DLRDSVKTGREHRAVAALEMQLRTLSKLSPKEAVLFIRKEIGYEKYLEDFAKKKNRDFTE WWDNLEEITSMSENYPDLESFFRFITEFNRKALEKRRSEEGSGVRFMTYHSAKGLEFDEV FLPDCIEGVIPDGRAKKQGELEEERRSFYVALTRARKGIHIYVTKTRYSKKTVPSRFIPE LLEGS >gi|333758476|gb|AFIH01000001.1| GENE 886 845120 - 845794 702 224 aa, chain + ## HITS:1 COG:CAC2435 KEGG:ns NR:ns ## COG: CAC2435 COG0745 # Protein_GI_number: 15895700 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 6 223 5 222 224 228 55.0 6e-60 MEKRKILVVDDEERMRKLLQDFLKMKDYEVLLAGDGEEAIDIFFKKKDIALVILDVMMPK MDGWEVLKTIREHSKVPVIMLTARSEESDELKGFDYGADEYISKPFSPKILVARVEALLR RTGGNKEEVLEIGGIRMDASAHSVSVDGKEIELSFKEYELLQYFIENKGIALSREKILNN VWNYDYFGDARTIDTHVKKLRAKLMDKGDYIKTVWGMGYKFEVD >gi|333758476|gb|AFIH01000001.1| GENE 887 845797 - 847326 1359 509 aa, chain + ## HITS:1 COG:CAC2434 KEGG:ns NR:ns ## COG: CAC2434 COG0642 # Protein_GI_number: 15895699 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 18 503 19 490 492 214 29.0 4e-55 MKKHYLRGRFALLFAGVFFVLIVIMLVGDNFFLERFYEKRKEKVLQNAYQEIDRYLQLSG GFSAAFPEEEGTNGEAQTSAMRYVSRLTETENISVIIMDNNSSRSYTSSANPTMLLQRLS SYILGKDGEKRKSLYKGDNYTIIKTRGRGEEGGYMESWGYFSDNSSSFIMSMPLSSLSEA VSVFNSFLLFLGGMTMALGVIIVYIASYEVTKPIQELAQLSLKMSRLDFSARFQGDNTDE INTLGNSMNILSERLEETICDLKKANNELQSDIENKTLIDKRRQEFVANVSHELKTPIAL IMGYAEGLSEGLCEDSESRTYYSNVILDEAKRMNHMVKDLMNLSAIEQGKDLPDFTLLDF PKLLQGVIANMDILLKQEGIQLEVDIPKELYLYGDEFKIEEVLMNYLQNAIHHVTEPKQI GIYTEYRGKNLVEVHVRNTGNPIPKEDLPHIFEKFYKVDKAHTRAYGGSGLGLSIVKAIM DSHHQECGVKNTLTGVDFWFTLERREKLF >gi|333758476|gb|AFIH01000001.1| GENE 888 847353 - 848084 764 243 aa, chain + ## HITS:1 COG:no KEGG:Shewana3_0129 NR:ns ## KEGG: Shewana3_0129 # Name: not_defined # Def: response regulator receiver protein # Organism: Shewanella_ANA3 # Pathway: not_defined # 38 241 18 220 220 105 34.0 2e-21 MSKVLLDLKGAYKMNEWNEMNNREENGGGLSAYTQGTLSPALYNVSIGVHLLVGLVITYF LALRMPYVLPQIYSVHPLIFSIGFLVVGVVGGMIAAKGNYVLSLIGYGLNILAFGTLLSF VGLIYPAQYIVLAAVLTTVVVITMTVAGMLFPNAFLSMGKTLFIALIGLVVAEFVTMLLG IFYPNIFAIIGIFIFSLYLGYDWARGQQYPSTASYACFTALQLYMDIINIFIRILRLMAS RRR >gi|333758476|gb|AFIH01000001.1| GENE 889 848214 - 848465 227 83 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MEDLRIALRNLMQEMLLKKNLSSDEEFQHWWIDEGNERRYFALQGRLEELEEEERRRSLL SFSYLTDALEDLNESSEEEGKKA >gi|333758476|gb|AFIH01000001.1| GENE 890 848462 - 849310 403 282 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227871644|ref|ZP_03990062.1| ## NR: gi|227871644|ref|ZP_03990062.1| hypothetical protein HMPREF6123_0001 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_0001 [Oribacterium sinus F0268] # 1 195 19 223 244 170 43.0 1e-40 MICKHCGREIEDNLERCPYCKTPLIRIKVKRICAYCKTEIKKGDTVCPGCGKNVPEKVRE LLEKDELNGSVQEDLEEKKPWKEKMDVLSFTKNEEKDWDKYILDFRLLILSIMPPIIAIF FKVLVAKSSFLPWYFTVLLVYFVIAMIVSYFLDGEIHRLWSIDKNRKLGEAEHLAFYICP PYTLYFILKRRKEKNNPLLFFLAMHLVLFVTCFLFKKGFGFSKKEEYGELFCKLKSCNKM VGTVFSGGDFSGKNSQERAMFSPQGNISFLLSLYYQGFYSVS >gi|333758476|gb|AFIH01000001.1| GENE 891 849141 - 850031 438 296 aa, chain + ## HITS:1 COG:CAC2707 KEGG:ns NR:ns ## COG: CAC2707 COG0122 # Protein_GI_number: 15895964 # Func_class: L Replication, recombination and repair # Function: 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase # Organism: Clostridium acetobutylicum # 21 289 7 285 292 141 32.0 2e-33 MENCSANLNHAIKWSELCFPEEISLEKIVRSGQCFRPREIFPSCFRFITKDSILYLKQVS AKELAFYINITEEGDGEAREITEKQWKKIWLPYFDGKRKYGKIERKSREDDFLQKCIAYG KGLRVLRQDPFETLLTFILTQRKSIPAIRSSVEKLCERFGEKQYSKVEEKEVYLFPRAEA LQNADFSECSLGYRAPFVRDAVERVLEKRLDLRALDKVPTEELLFKLMEVHGVGIKVAAC VALFAYSRMDIIPEDVWMKRIWDKAYCGENPYLNDPDGGIIQQYLFHYAIHHKEEW >gi|333758476|gb|AFIH01000001.1| GENE 892 850031 - 850627 473 198 aa, chain + ## HITS:1 COG:YPO2559 KEGG:ns NR:ns ## COG: YPO2559 COG1896 # Protein_GI_number: 16122777 # Func_class: R General function prediction only # Function: Predicted hydrolases of HD superfamily # Organism: Yersinia pestis # 2 197 1 192 197 154 42.0 9e-38 MLHSFFALLSRMKYIHRWALMRNAREENLSEHCLEVGILTHALCLIGNKKLNKKLSVDRA VLRALYHDAAEILTGDMPTPVKYRREELKTAYKKVEKEAEERLLSTLPDYLEEEYKKVFF PEEEENTAYENKLIKAADKLSALIKCEEELRSGNQEFATAAASTRRKIEEMAEELTELKI FMEDFLPAYGKTLDELTE >gi|333758476|gb|AFIH01000001.1| GENE 893 850631 - 851545 883 304 aa, chain + ## HITS:1 COG:no KEGG:bpr_I2282 NR:ns ## KEGG: bpr_I2282 # Name: not_defined # Def: hypothetical protein # Organism: B.proteoclasticus # Pathway: not_defined # 18 284 19 303 318 162 35.0 2e-38 MAFLVEEKELQGRKGFVITGYEGNARVLHIPEYLENASGEKLPVVEIAAHAFDGRGDLER VELPKSIRTLRAFSFFNCKNLREFLLWDSVEDYYDGSLRQCLCLSHIFVYFEKDGNFQIV RDILGDSDRRLQFHLYLKGEEELSLLFPGYVDRVREDTMARQIHDTIDGCGYSYRQTVGR ARIDLRLYDKLFERVIHDAKGAAVYIALGRLRYPLELLDKAKEDYLRFLREEDSFALRQL LLDCETEWVEFYMSLRLFSEAGVKTALELLAQYGNAELTARFLDYQDRYLKKEKKRAFFD PDSL >gi|333758476|gb|AFIH01000001.1| GENE 894 851558 - 853168 1118 536 aa, chain + ## HITS:1 COG:no KEGG:bpr_I2260 NR:ns ## KEGG: bpr_I2260 # Name: not_defined # Def: hypothetical protein # Organism: B.proteoclasticus # Pathway: not_defined # 12 536 13 515 515 358 39.0 3e-97 MEERKQTAQGALNNLGLRILNQAKIELSLSMRYLSRALDKLSFQMDFNTRRMGTEGEKLH FHPEFVFQLYVESPQKLYRLYMHSLLHCLFRHMFKTEGREETLWNLATDIHVEYVLDSID VPLLLRPAYPFREDYFLKLEKEIKSLSAERIYAYLSTQNLSYAERERLEQEFVKDDHRFW EKLGEEKQSFSADGVEDSEEKEDEERKESSEGMEGSDKNNPPEGVDGSERNESPEGMKAN EKNEVPDEPEGSGEREDSGEEKGEQGAGDSAISEDAEQMKKASPKREDADSEEREENRKR LDKDWEDIGKRTEEEMKDEKEVDKSEKLSWFLHLEHKRYTPFQDFLRKFSVDREELKTDP ESFDYGYYYFGLSQYGNMPLIEENEYRERRKIPELVIAIDTSYSTKGEMVKRFLEETLAI LQDKEAFFSKCQVHIVECDDRIRKDILVENAEEMEHYRERFEVSGGYGTDFRPVFHYIED LRKKGELKELKALLYFTDGRGRYPKYAPGYTAAFVFPKGEDIDDENAPFWAMKLYI >gi|333758476|gb|AFIH01000001.1| GENE 895 853267 - 854802 1154 511 aa, chain + ## HITS:1 COG:DR1171 KEGG:ns NR:ns ## COG: DR1171 COG0714 # Protein_GI_number: 15806190 # Func_class: R General function prediction only # Function: MoxR-like ATPases # Organism: Deinococcus radiodurans # 33 233 21 207 340 87 26.0 4e-17 MNIQEAKEEIKRTVEAYHKRDEDGIYKIPVEKQRPLFLMGPPGIGKTAIVEQVAEELGIN LISYTITHHTRQSAIGLPFISKKIYGKKEYSVTEYTMSEIVASVYEQIERTGIEEGILFL DEINAVSETLSPTMLQFLQYKTFGMHRVPEGFIIVTAGNPSEFNKSVRDFDIATLDRLRK IDIEEDFQSFKSYAYQAGVHSAITSYLEIKKDRFYFVKQDIEGKRYVTARSWEDLSKILQ VYEELHYPLEKELCQEYLADPEVAEDFSLYYSLYQKYKEIYHVPDILEGAEIKDTRLFLE APFDEKLSLLSLLTDALQNAFTDYVKEKELFSRVFRFLKNMKDGLSEVPVKQALEEEMKR QRKRMASLKEARMLSKKEESLRLQLIQMLSEFYSALTEQHSAEGTSNREDREENEADFSF VKDCFKRKEEERQEKIGKSGEMLSNALHFLGNTFGEGQELLLFLSEIGKSRNALEFLSDI GNETYTRYNQYLLLKDKQKALQEEAEEALKK >gi|333758476|gb|AFIH01000001.1| GENE 896 855303 - 855725 705 140 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227874431|ref|ZP_03992611.1| ribosomal protein S12 [Oribacterium sinus F0268] # 1 140 1 140 140 276 98 4e-72 MPTFNQLVRKGRETSKKKSTAPALQKGFNSLKKRATTNSAPQKRGVCTAVKTATPKKPNS ALRKIARVRLSNGIEVTSYIPGEGHNLQEHSVVMIRGGRVKDLPGTRYHIIRGTLDTAGV ANRMQARSKYGAKKPKAKKA >gi|333758476|gb|AFIH01000001.1| GENE 897 855912 - 856382 768 156 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227874430|ref|ZP_03992610.1| ribosomal protein S7 [Oribacterium sinus F0268] # 1 156 1 156 156 300 96 2e-79 MPRKGHTLHRDVLADPIYNSKLVTKLVNSIMLDGKKGVAQKIVYGAFERVTAKAEKDALE VFDEAMNNIMPVLEVKAKRVGGATYQVPMEVKPERRQTLALRWLTEFSRKRSEKTQAERL ANEIMDAANNTGAAVKRKEEMHRMAEANKAFAHYRF >gi|333758476|gb|AFIH01000001.1| GENE 898 856397 - 858514 2010 705 aa, chain + ## HITS:1 COG:CAC3138 KEGG:ns NR:ns ## COG: CAC3138 COG0480 # Protein_GI_number: 15896387 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Clostridium acetobutylicum # 4 704 3 687 687 898 63.0 0 MAERQYSLEHTRNIGIMAHIDAGKTTLTERILFYTGVNHKIGETHEGSATMDWMAQEQER GITITSAATTCHWTPEKEHKKIPGAPEFRINIIDTPGHVDFTVEVERSLRVLDGAVGVFD AKSGVEPQSENVWRQADTYHVPRIAFINKMDVVGADFFHSVQTIVDRLGKNCIITQVPMG REDTFVGVIDLFEMRAYFYKDDKGEIIEITDVPDEYKDLAEEYREKLVEGISELDDDLME KYLEGETPTEEELKKALRKGTIEGNAIPCLCGTAYRNKGVQKLLDAVIDFLPAPTDIPDI QGTDMDGEPDSRPSSDSAPFAALAFKIMTDPFVGKLAYFRVYSGTLKTGSYVLNSTKNKK ERVGRLLQMHANKRQELDEVFSGDIAAAVGFKLTSTGDTICDEQHPIILESMEFPEPVIS VAIEPKTKVSQGKMSDALAKLAEEDPTFRVRTNEETGQTIISGMGELHLEIIVDRLLREF KVEANVGAPEVAYKETFTKPVDVEGKYIHQSGGSGMYGHCKVKFEPMDANAEETFKFQST VVGGSIPKEYIPAIEKGIREAANSGVLAGFPVLGVSANVYDGSYHEVDSNERAFEFAGSI AFKNAMQKADPILLEPIMKVEITTPEEYMGNVIGDVNSRRGKIDSMEDIPSGKQINAYVP LAEMFGYATDLRSKTQGRANYSMFFERYEKCPKNIQEKVLADAKK >gi|333758476|gb|AFIH01000001.1| GENE 899 858670 - 859863 1425 397 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 397 1 407 407 553 68 1e-155 MAKAHFERTKPHCNIGTIGHVDHGKTTLTAAITKVLADRVAGNTATDFANIDKAPEERER GITINTAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGVMAQTREH ILLARQVGVPAIVVFLNKCDMVDDPELLELVEMEVRELLSEYEFPGDDIPVIKGSALKAL EDPKSEWGDKIMELMDAVDSYIPEPARETDKPFLMPVEDIFTITGRGTVATGRVERGVLH VSDEVEIVGINEETQKSVITGIEMFRKQLDEAMAGDNVGLLLRGINRDQIERGQVICKPG SVKCHKKFTAQVYVLTKDEGGRHTPFFTNYRPQFYFRTTDVTGVCMLPDGVEMVMPGDNT EMEVDLIHPIAMEEGLRFAIREGGRTVGSGRVVKILE >gi|333758476|gb|AFIH01000001.1| GENE 900 860161 - 860649 467 162 aa, chain + ## HITS:1 COG:L89201 KEGG:ns NR:ns ## COG: L89201 COG3760 # Protein_GI_number: 15674012 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Lactococcus lactis # 1 162 1 163 163 106 36.0 1e-23 MQGFKEVMEKLQEQNIEVQLVEHEAAFTMEDADRVIEGIPGVRTKTLFLMNKKKIKFYLL IMDEDKRLDMSAFKDLVDDRQLKMASEEMLYEKLGLQPGVVSPFGLLNNKDKDVEVFVDK DIAEEERMSFHPNTNEKTIFIKSPDLYSFLEKIDHPAKIVLL >gi|333758476|gb|AFIH01000001.1| GENE 901 860963 - 861418 248 151 aa, chain + ## HITS:1 COG:CAC3531 KEGG:ns NR:ns ## COG: CAC3531 COG1943 # Protein_GI_number: 15896768 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Clostridium acetobutylicum # 7 151 5 149 157 191 63.0 4e-49 MAKKEYALAHTKWMCKYHIVFTPKYRRKIIYYQYKSDIRDIIKQLCAFKGVEIIEGHLMP DHVHILVSIPPKISVSSFMGYLKGKSALMIFDKHANLKYKFGNRHFWAEGYYVSIVGLNE ATIKKYIQDQEKHDIALDKLSVKEYEDPFKG >gi|333758476|gb|AFIH01000001.1| GENE 902 861755 - 862066 263 103 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227874427|ref|ZP_03992607.1| ## NR: gi|227874427|ref|ZP_03992607.1| conserved hypothetical protein [Oribacterium sinus F0268] conserved hypothetical protein [Oribacterium sinus F0268] # 1 98 32 130 383 64 53.0 2e-09 MGKIVDNLDDVAKLLSKKSEQKIILKKRNQSQRILRNKRNKREHNEDRKIMLIPVLIIVL ILLIKFLEALGLGVPLTPKNKIIASASEMQSPSDLEEEKRMIP >gi|333758476|gb|AFIH01000001.1| GENE 903 862153 - 862785 445 210 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227874427|ref|ZP_03992607.1| ## NR: gi|227874427|ref|ZP_03992607.1| conserved hypothetical protein [Oribacterium sinus F0268] conserved hypothetical protein [Oribacterium sinus F0268] # 1 189 165 357 383 236 69.0 6e-61 MSGVTNQSTEQTSKLKAQLKTQSGYIEAYEDIKTYAVPGIGENEKLVFLQYKVRFRRAKT AAPAIMYCYIRVNEANAFELVENKTPEQTKFVYDYIQTHQEVKDLINAVDSQLLEALSSD SRLAVLYDAFQTGRIYKEDQASIDSEVSLIEMDENGPTVSESESSSESNGTSSPSTESEG SEQNAASESSETAVIETSAGTAATETSGGA >gi|333758476|gb|AFIH01000001.1| GENE 904 862894 - 863919 945 341 aa, chain + ## HITS:1 COG:CAC2283 KEGG:ns NR:ns ## COG: CAC2283 COG0809 # Protein_GI_number: 15895551 # Func_class: J Translation, ribosomal structure and biogenesis # Function: S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) # Organism: Clostridium acetobutylicum # 1 340 1 340 341 459 63.0 1e-129 MNTKDFYYDLPEELIAQDPLLKRSASRLLVMDRKSGEIEHKHFEDVLSYLREGDCLVLNN TKVIPARLHGVKAETGAHVEVLLLTRLTDKNWECIVRPGKKLRVGAEIVFAENLLSGTVI ECKEDGNRVIEFHFEGIFEEILDKLGEMPLPPYITKQLEDKTRYNTVYAKEEGSAAAPTA GLHWTKELLEKVQEKGVKIAYVTLHVGLGTFRPVKVEDVEKHHMHSELYIVDKETADLIN STKKAGGRIICTGTTSCRTIESNADENGVLHPRSAWTDIFIYPGYRFKVMDGLITNFHLP ESTLIMLVSAFSNRENVLHAYQEAVRERYRFFSFGDAMLIL >gi|333758476|gb|AFIH01000001.1| GENE 905 864047 - 864769 476 240 aa, chain + ## HITS:1 COG:VC2223 KEGG:ns NR:ns ## COG: VC2223 COG1187 # Protein_GI_number: 15642221 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Vibrio cholerae # 2 237 20 239 340 194 44.0 2e-49 MRINKWLSSMGICSRREADRLISEGKVKVNGEAASLGQEISGEEDIEMDGKCISGQGEKR EKPKEVLLAYYKPRGVICTTGEKDRGKNVIEDIHYPERIYPIGRLDKNSEGLLLLTNQGE LVNQINKSRSEKEKEYIVTVEEDITKHFLREMREGVYLKELDRTTKPCVVFQEENIPVMQ RKRQFHIILTEGLNRQIRRMCATLGYTVKRLKRVRIMNLTVDGLMPGEYREIRKEELGLK >gi|333758476|gb|AFIH01000001.1| GENE 906 864916 - 866907 1771 663 aa, chain + ## HITS:1 COG:SP1117 KEGG:ns NR:ns ## COG: SP1117 COG0272 # Protein_GI_number: 15900984 # Func_class: L Replication, recombination and repair # Function: NAD-dependent DNA ligase (contains BRCT domain type II) # Organism: Streptococcus pneumoniae TIGR4 # 5 653 3 646 652 353 34.0 7e-97 MDKRKRIEELVELLNQAGKAYYQEGKEIISNLEYDKAYDELVRLEEETGIVLSASPTQNV GYSVATALPKEEHASPMLSLDKTKSVETLQSFLGEQKGILSWKLDGLTVVMTYEKGELVK AVTRGNGRIGEIVTENAKRFRNLPLRIPFKGRLVLRGEALIRYSDFAKINEEIPEEGAKY KNPRNLCSGSVRQLDPKITWERRVYFFPFTLVSVEEGEDRSSRESGGLPDFHNSHEAEFE FLEQQGFQVVGRRTVNKEELPGAVSDFSEQVKKNDFPSDGLVLLMDDISYGKSLGTTAKF PRNALAFKWEDEEEKTILREVEWSPSRTGLINPVAIFDPVELEGTVVSRASLHNISYLED LKLGIGDEITVYKANMIIPQIGENLTKSGQLPIPEHCPACHEETKIVQDKEAKMLYCENP HCPAKRIKQFALFVSRDALNIEGLSEMTLEKFIGKGFIQELPDLFSLEEHKEEIIAMEGF GQKSYDKLIENAEKARETSLARLLYGLGIGGIGASNARVLSEAFHEDAEELSRAELSEVV SIKGIGPILGESIVRYFKEEENLRLFRKLLSILHLHKEEKAENAALSGKVFVITGSLNHF QNRKELEEEIRKAGASTASSVSKNTSYLINNDKNSTSSKNKKAQELGIPILSEEDFLKLL QGE >gi|333758476|gb|AFIH01000001.1| GENE 907 866993 - 867868 791 291 aa, chain + ## HITS:1 COG:BS_lgt KEGG:ns NR:ns ## COG: BS_lgt COG0682 # Protein_GI_number: 16080552 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Prolipoprotein diacylglyceryltransferase # Organism: Bacillus subtilis # 29 275 18 251 269 176 42.0 3e-44 MNFQDYDIYFPHLQIGIKHLVNHISPFGFTIAFYGIIIGCGMLLGMLVASKEYVRCGYKA DDIQDFALFVIVLGVIGARIYYVIFEWDYYSQHLMEIPNIRQGGLAIYGGVLTAIATCIV FCKKKKLDFFPMADAGVLGLILGQAMGRWGNFFNAEAFGGYTNSLFAMRIKEAIVNPSMI NDNVASHLQNIDGISYVQVHPTFLYESVWNLCVFFFLLWFSRRKKFKGQIFLLYLGLYGL GRFFIEGLRADSLMLFGTGIAVSQALSLVLVIVSIILQYAFLKREKSEEKK >gi|333758476|gb|AFIH01000001.1| GENE 908 867964 - 870189 2577 741 aa, chain - ## HITS:1 COG:CAC0120 KEGG:ns NR:ns ## COG: CAC0120 COG0840 # Protein_GI_number: 15893416 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Clostridium acetobutylicum # 379 736 203 514 555 207 39.0 6e-53 MKTKDSKKTARQKESKGLSLSTRLSITLGLLGFLIILGLSYFIVDLGSQSTKKNLDKNMD DLLTLTGEKTEDILGEITTLSGSMKESISFVWGQKDEIGGVPANPWKINEKKDNQLIPEQ ITPMSGTTFRSRILDREVPASRYNAEVVMMNSMYSTLKSNPNITGVGYFFEANKVIDGVK DYGPYTTFKSVETRDIINYPFDYYKDKSYYTTAKSTQKPTLTVAYTLDEDPSKTVISICD PIIADNDFKGVITIEMDLASFDALKHEDSRFPSLFTSVIDSDGNFMYVSNESLKGKNLTD AITKEDFSAISEKMKEGNPFHMTVINSSGVKRRVYLAPTEFGNTTWWSLMSIADSDYQQV TRRLITLALLIGLSGTVILIVATYLLVKKTLNPLKMIAQVGDQLASGNLNVEVKYDKKDE IGHLADSFKNVTTRIKAIILELNEKLSAISQGNFRVDLSNEENYPGDYKPLLHSLRDITK DLSHTMTEIKNSAEEVNSGAEQVSNSAQALSQGATEQASSIEELGATMNDISEKIKGTAE QSLKANKLSRESVEAVEISNKKMEEMSVAMQEITDKSNEISKIIKTIDDIAFQTNILSLN AAIEAARAGAAGKGFAVVADEVGNLAQKSAKAAQNTSSLIAETIDAVERGAQISNETAES MELVKTKAKDITEIIEKISSASEAQAAGIKQLTIGADQISSVVQTNSATAEESAAASEEL SGQANIMNELVSKFQVIENED >gi|333758476|gb|AFIH01000001.1| GENE 909 870657 - 871706 1219 349 aa, chain + ## HITS:1 COG:SMb21345 KEGG:ns NR:ns ## COG: SMb21345 COG1879 # Protein_GI_number: 16264669 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Sinorhizobium meliloti # 63 348 37 324 327 167 39.0 3e-41 MKKMLSVALSAIMAASLMACGGGSAKGTETKAAQTEAGSEAKGAAETEKAGEKTDAGDAV SLEGKTVGFAQTDSMSAWRTTETDSIKKAVEEAGGKLVVKDAGGDIATQESDIRDLVAAK VDYLVVAPLENNGLQSALEEAMEAKIPVILVDRAIDGEAGKYFTTSIRSDFVWEGEQCAK ALETALPDGGNVVIINGGYDSSTSTDRQDGFVKTLDSSKFKVVAEQDGQWLMDKAQAVME NILQAQGGENINAVYCVTDDMAQGAMKAIEAAGLTPGKDILILGIDGTKAAFKDIEAGRQ LASCTCSPYFGPIVVETIGKIAKGDTVPENITNEDTLYTKENVQVDLGF >gi|333758476|gb|AFIH01000001.1| GENE 910 871861 - 873363 186 500 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 265 469 28 221 318 76 25 6e-12 MEGVEKSFPGVKALKGISLEVEEGEVHALMGENGAGKSTLIKVLTGVYGRDQGKIYFAGE EIHCKSPAEAGEIGISTIYQELNLIPYQTVYENMFLGRELKKNAFFLDRKAMQDEAEKAL SDLGLEIDVTKSLNHYSTAIQQMVAIARAVRSKARLVIMDEPTSSLDQTEVRVLFRIIRQ LKEKKISVLFISHKLDEVYEICDSLTIFRDGETVGRYAVQDIDQYKLISLMIGKEWKERE REDKKSFSDAETLLSVKNAKLAMRLSGVNLSIRKGEILGLAGLLGSGRTELAELLFGTEK AGEGEVFWMDEAYFRRNPSKSIEKGMGFCTEDRKTEGILPNLSVEENMTIAMLPKLQKHG FIDFKKQKELAKRYVELFNIKTPSLAQKIRNLSGGNQQKVLLARWMCMNPKLMILDEPTR GIDVGAKEEIEKLIQGLSAEGISVLMISSELSELARNCHRVVVLRDGKVRGEIEGDAIFE DSIMTLIAEDAKEGEEDEAK >gi|333758476|gb|AFIH01000001.1| GENE 911 873350 - 874297 972 315 aa, chain + ## HITS:1 COG:SMb21343 KEGG:ns NR:ns ## COG: SMb21343 COG1172 # Protein_GI_number: 16264667 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Sinorhizobium meliloti # 12 312 26 329 334 152 38.0 8e-37 MKQSKNSRFSDYASLLFLAGLLLFNSIFTPNFFRLGTLQNSITQLCPTILCGMGMTLVIS TGGIDISVGSLMALSGVIMAKCMERIGIFPGILLGIGFSVLIGMFTGIMVGKLKLQAMVI TLGLMLGVRGAAQVLCDGRDIYFNTLGERGELLSDFGTLKFFNLIPVQLLPIFISVLLIW ILIKKTTLGVQIQAVGDSIKSSNLVGIHTNRVFVFVYGLSGFFAAIAGIMQAAKVSVAAG SSLGQLAELDAIAAVVIGGTPMSGGRARVLGTVLGAMIMQCITLTCVMNNIPDQYAQVVK AMIIVFAVYIQRERS >gi|333758476|gb|AFIH01000001.1| GENE 912 874300 - 875307 773 335 aa, chain + ## HITS:1 COG:BH3731 KEGG:ns NR:ns ## COG: BH3731 COG1172 # Protein_GI_number: 15616293 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Bacillus halodurans # 30 326 21 308 314 150 37.0 3e-36 MEKESKALSAVRTDKAVFKKMALNKTFLAFLLLCILSGLIFRDKHFLSLENAMNILLKAS KNGGLLALGMTFVILSGEIDLSVGAVFALSGVVMGLVGEVNPFLGIFAGIMVGVLTGAMI SFLVCKMRISSWIASLSMLFALRGMVQILAKKSVAIKDPLLLFAKAKLFSNLIPGVTGGI SVLIVFFFAFFFLCRYLAENTKFGMRLYASGGNEEAAKLMGIQVKKIKSIAFFLSGFIAA LSGVFLASSSGSATLSAGNLYETYAIAMCAIGGIQLSGGQGKFSGTFFGILIYYIINTLF TYLPSSISVHWQSIIMGILVILSVAMQSEIFHQKK >gi|333758476|gb|AFIH01000001.1| GENE 913 875319 - 877211 1621 630 aa, chain + ## HITS:1 COG:SMb21655 KEGG:ns NR:ns ## COG: SMb21655 COG3250 # Protein_GI_number: 16263752 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase/beta-glucuronidase # Organism: Sinorhizobium meliloti # 102 542 74 472 755 82 24.0 4e-15 MSELRNKLSSVFGEKLNRENPLPEHPRPQFKRAWMQSLNGEWIYRVVQKEDRKEVFRGKI LVPFSPETELSGVGRMLNPDEVFEYRKNFVSDFQPEKERLLLHFGAVDQECEVFVNGEKV GEHKGGYTGFSMDISEQCTEESNLLLVKGTDGSETVPHARGKQRWKKNCRYSSIFYTGQS GIWKSVWLEKVPKNYLRYAKMTADLDEEGVRFSFAVNPPAGEEKIEESVHVRIFEPQIFA SKTKAGEKGADPVKEAEEKPIYTEGMHLLYEGEARPGEEFFCKLALIKPWSTEEPYLYPV QFQYGEDSVESYFAFRKLSLGRDKKGILRFFLNNKPILFTGLLDQGYWPESLMTAPSDEA LLYDIHKTKSFGFNTIRKHMKVEPDRFYYHCDREGIFVWQDMPCGGGSYNHFFVTDFPNV WDKGARKIKDSHYKLFARQDQAGREQYYKDLEEMVKELYNHPSIVLWTPFNEGWGQFDAR VATEKLRKWDKTRLINEACGWFDQGGGDLFSIHNYRYALKIKPEKNRVVALTEFGGYAFP LKEHLWSKKEFGYKFFSSEEEVTAAYEKLWERDIFPNVIKGLSAAIYTQTSDIEEEINGL MSYDRKVDKLTKEILKKLNKKLMEAYHSCF >gi|333758476|gb|AFIH01000001.1| GENE 914 877281 - 877907 633 208 aa, chain + ## HITS:1 COG:BS_ywlG KEGG:ns NR:ns ## COG: BS_ywlG COG4475 # Protein_GI_number: 16080744 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus subtilis # 25 204 1 178 180 177 48.0 1e-44 MDVENKQAVEQEVHTESALAEGIDLHSLEEEVYLLTGEFIEKAKLKKGQLFVVGCSTSEV LGEKIGTASSYSTAGALFRGIYRAAKESDLFLCTQCCEHLNRAIITDKEAALAHGLMPYL VNVIPKEKAGGSFSTVAYENFANPVALEKVRADGGIDIGDTFIGMHLKEVAVPLRLSKNT LGSAHLTAARVRPKFVGGSRAVYDENLL >gi|333758476|gb|AFIH01000001.1| GENE 915 878190 - 878903 286 237 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227873766|ref|ZP_03991995.1| ## NR: gi|227873766|ref|ZP_03991995.1| conserved hypothetical protein [Oribacterium sinus F0268] conserved hypothetical protein [Oribacterium sinus F0268] # 1 237 17 248 248 176 45.0 1e-42 MEKGISFHSIYYRYFTFIFALLILFFYVVGKRQGFDSLDVDLSVVKLKLSPGEFALYGNG ILLLVSLPFYFYKKLKVGREGIYLPSIKLFVPWEEINAVSHVWISEACLVKKGGVFLYNR KSIVFYRKEKKPICIYNISLLSLYAVKYYRPEMPTNLSFASPATLFNIGLNAIFLLEGYL FYFRGLQLKTFILWILCYFFKVFLLPIWMLKRENRIHGSCLCHDSLLHGNRSEVIHI >gi|333758476|gb|AFIH01000001.1| GENE 916 878909 - 879628 662 239 aa, chain - ## HITS:1 COG:BS_ytmQ KEGG:ns NR:ns ## COG: BS_ytmQ COG0220 # Protein_GI_number: 16080042 # Func_class: R General function prediction only # Function: Predicted S-adenosylmethionine-dependent methyltransferase # Organism: Bacillus subtilis # 1 224 1 204 213 183 47.0 2e-46 MRLRHITGSEEFVSDSPFVIQNPEALKGHFSEKLFSNENPHATQTILVKNKRPLCLEIGM GKGKFIFEMAKRNPERNFIGIERYDSVLFKAIKRREKEEEAGTVLKNLYYMSMDARFLSE VFSAGEVDTIYLNFSDPWPKKRQANRRLTSPVFLKLYEQVLSGDGHIEFKTDNRDLFDYS LESFQENGWDILAKSFDLHHDETLSEGNIMTEYEEKFSAKGNPICKCIAKKNKTREKAE >gi|333758476|gb|AFIH01000001.1| GENE 917 879777 - 881426 1603 549 aa, chain + ## HITS:1 COG:BH1295_1 KEGG:ns NR:ns ## COG: BH1295_1 COG3409 # Protein_GI_number: 15613858 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative peptidoglycan-binding domain-containing protein # Organism: Bacillus halodurans # 104 388 9 313 459 118 33.0 3e-26 MGKSEYIFPLLNPENRMIKNKMIKRGISLVLLSSIVGLSACEKKLGTEQERAAASSSDIV LTTEDSGEESVAIAALGLNANVLPSIEGVTIDGQAEELAPVNLTVGVINSVVKDLQERLM QLGYMEDDEPTTYYGDATSKAVQYFQRQTGRTMDGITGVDTWDALMSESAPHYAAKLGFK GDDITKIQYRLYNLGYLTESGQINGTFDADTETAVKKLQEVNHLTVDGTVGAATVDLLYS EDVKANIIALGEQSEIVKKYQNRLIALGYLSGEADGNFGLSTQNAIRAFQSRNDQVVDGY LGPDTRHILDSESAKPFGMRLGEQSSDVQNMQKLLAKYGYLPSDKASGYFGELTKDAVLS FQRTNGLTADGTVGAKTLQILQSNSAKSKPKNSRNGNNGNSRRGGGNTGGGGNAAPSGGF SSGSGGATVSGSASALISIASSKIGSPYVWGSKGPNSFDCSGFVYWCLNQAGVGTSYMTS SGWRSPGRFKKVGASELQEGDIVVVRGHVGIYAGGGSVIDASSSNGRVVHRSFSGWWSKN FITAWRIFS >gi|333758476|gb|AFIH01000001.1| GENE 918 881542 - 882462 918 306 aa, chain + ## HITS:1 COG:no KEGG:Closa_3994 NR:ns ## KEGG: Closa_3994 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 306 1 307 310 333 52.0 8e-90 MKKTALIVMAAGIGSRYGAGIKQLAKIGPFGEIIMDYSVHDALAAGFDKLIFVIRKDIEE EFRDIIGKRIEKIADVHYAFQELNALPKGYSLPEGRSKPWGTAHALMQARNMVDCPFAVI NADDFYGKEGYRLIHDFLVQERPETKMLEMCMAGYHLKNTLSKNGSVNRGICNVSKDGYL LSIEEIYEIKREEDGVLRGLNQRKETVCLEEEAIASMNMFGLPEEFLDLVTEKFPAWLDK YGKEMKSEYLLPREINNLMLEGRGRVEVLPDHDRWFGVTYHEDKALAEEALRECIAEGLY PEKLYN >gi|333758476|gb|AFIH01000001.1| GENE 919 882599 - 883504 556 301 aa, chain + ## HITS:1 COG:no KEGG:Closa_0071 NR:ns ## KEGG: Closa_0071 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 295 1 300 424 196 36.0 1e-48 MSDQERESRKRKLKENVIFGEKENTEEEEQEGRSRASIRRKLSLPLVFLLLFFLGLLFFF YSKRRFSRISTRWTTAFSDKEGSSQEYFSFADGVVKLSKDGASYLSKTGKLIWNQAYEMG SPVVSINGDFMAIGEKSGSKLFILSTSGLVGQGESPLPIEKLSISGKGVVYALLSDKDST YITVFSKEGRNLDIGIRSVMSGDGFPMDFSTSKDGEELLVAFSYLEQSVLKSRVVFYNFS SLGKNVGADRVVGGFTDNFSGKIVGRVHFFTNEESFVAYNGGLSFFSTRVKTSPEEKNRK G >gi|333758476|gb|AFIH01000001.1| GENE 920 883519 - 883857 367 112 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227873349|ref|ZP_03991610.1| ## NR: gi|227873349|ref|ZP_03991610.1| conserved hypothetical protein [Oribacterium sinus F0268] conserved hypothetical protein [Oribacterium sinus F0268] # 24 112 400 488 488 114 57.0 3e-24 MICYNDSYLAVFADNTKDADKGNYRLLLFRKSGERLFDKPISYMGSKMEISGDKIFLYQE KTYQVYDFSGRLRYNGTTEDSLYYLRSASDFNLGGTELMLCFPNKVERVRIQ >gi|333758476|gb|AFIH01000001.1| GENE 921 883767 - 884000 65 77 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNLFISILYYFVLYCLVLYCFVLYCFALYSVTLYDVTLYGVTLNRRAFYCILTRSTLFGK QSISSVPPRLKSDAERR >gi|333758476|gb|AFIH01000001.1| GENE 922 884033 - 884986 626 317 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|116517028|ref|YP_816079.1| glucokinase [Streptococcus pneumoniae D39] # 1 315 1 319 319 245 43 5e-63 MNQYCVGIDVGGTTVKCGIFTYNGVLLDKWEVMTRKAENGKYILPDVAEELKKHLEEKTI AYEDITGIGIGVPGPVEPDGHVRVAVNLGWKDIYPARIMRELMGGRIPCAVGNDANVAAL GEMWQGGGRGYQNMMMVTLGTGVGGGLILNGKIVAGAHGAGAEIGHIHVREVEGERCACG GMGCLEQVASATGIVKEAERFLRMFREPSSLRIYGKALTAKIVCDAAKEGDQLAYLSLDL SMRSLGIVLAQVSMVADPEIFVIGGGVSKAGTFLLDLIRKHYEEYTPILEKKAELVLATL GNDAGIYGCARLMLEKD >gi|333758476|gb|AFIH01000001.1| GENE 923 885002 - 887362 2225 786 aa, chain + ## HITS:1 COG:BH3106 KEGG:ns NR:ns ## COG: BH3106 COG1193 # Protein_GI_number: 15615668 # Func_class: L Replication, recombination and repair # Function: Mismatch repair ATPase (MutS family) # Organism: Bacillus halodurans # 3 785 2 785 785 541 41.0 1e-153 MNQKVLKTIEYTKIIAMLIEEAESSLGKERAEALLPSSDFYEVERNLLETEEAESRIRVK GPISFRGIMDIRPYFPRLQLGASLSVFELYQVARMLESSKKVKEQGGEIEDSLRAYFEEI DSLEEIRRELARSIESEERLFDDASKELSDIRRKEKGIEGKITEELNRILNDKRSMLQEG VITLRNGRHVFPVKAEYKNAFHGIVHDESSTGVTLFMEPLSIVQLENNLSELFSLEKEEV EKILLSLSLKLSPNLPVLERNLELLSHLDFVFAKAKLGKKMDGVRPGLEKEKKLKLLDAR HPLIPKDKVVPISIHIGEAFRLLVITGPNTGGKTVCLKTLGLLQLMGQAGLLIPAFQGSS ITVFKEIYADIGDEQSIEQSLSTFSAHMTNTVKILSEADSDCLCLFDELGAGTDPTEGAA LALGILHELYERGVTTLATTHYAEIKLYALSTEGVENAACEFDVESLRPTYRLLIGVPGK SNAFAIAKKLGLSEKIIEDARGRIGEEDLHFEDLISDLEDSKRLAERERLEIEQYKEEVE RLKARARESTKGIEKGREKILNRAREEAAKILSDAKETADSIVKEIRKRENGGGSSLEVE QIRSKLKKKMEETQAFSGQSVKGPMQTISLKNLKLGDKVRLLNMHNVVGTVTELPDKNGM FTVSAGMLRTKVSAKEVEFIQHKEKEAPVRNQGKTAGLGRSKAMGISPEINLIGKMTADA LPELNKYLDDAFLAKLPQVRVVHGRGTGALRKMVHDCAKKNKHIESFRLGEYGEGSDGVT IIYFKK >gi|333758476|gb|AFIH01000001.1| GENE 924 887500 - 888234 742 244 aa, chain + ## HITS:1 COG:CAC3220 KEGG:ns NR:ns ## COG: CAC3220 COG0745 # Protein_GI_number: 15896467 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 6 243 7 227 228 251 52.0 8e-67 MAEKQRIMIVDDDSSIAELISLYLEKECFSTKIAEDGEAALSLYEKEGADLLILDLMLPG IDGYEVCRRIRASSDVPIIMLSAKGETFDKVLGLELGADDYILKPFDTKELVARVKAVLR RFQPGRKSASRETTDNGAGEEQLQKGKHISYSDLVVNLTNYAVHYKGKTVDMPPKELELL YFLASYPNQVFTREQLLDHIWGYEFAGDSRTVDVHIKRLREKLPGGEEWEISTVWGIGYK FRVG >gi|333758476|gb|AFIH01000001.1| GENE 925 888240 - 889649 966 469 aa, chain + ## HITS:1 COG:CAC3219 KEGG:ns NR:ns ## COG: CAC3219 COG0642 # Protein_GI_number: 15896466 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 191 464 201 474 475 200 40.0 4e-51 MRRRLFIKFLLGYSIFFLLSLFFMYLYGGRLVQRYFYNREGTTLYQEVTRLANYYSKEEY GSLSIGKITAEMEGSIQRKALGWTLVSPKGKILAFQGRENIQGEEIRNFDPTKNGEKIYY TENFQGLLTETMLVAKAPIQRNFQNIAYLYLLLPLSEIEQRKADIIDIFFVLLLAIFFFS LSIFGVFYTFVYRPLRKITAGAVCYAGGEYQHRIMVSGRDEMGYLADTLNYMAEEIQKSD DYQRQFIANVSHDFRSPLTSIKGYLEAMLDGTIPRDMEEKYLERLIAETDRLSKLTQSML SLNKLDEEGMLNRSNFDINRMIRQVCSSFEMQCAKKSLQFSLIFAEKKEMVYGDYPKIQQ VLYNLIDNAVKFSKEGTEICIRTEKKGTKVFTSIKDQGIGIPKKDTQKIWERFYKTDLSR GKDKRGTGLGLSIVKGIISAHKEHIDCISTEGVGTEFSFTLPISLKEEA >gi|333758476|gb|AFIH01000001.1| GENE 926 889653 - 890876 930 407 aa, chain + ## HITS:1 COG:aq_1450 KEGG:ns NR:ns ## COG: aq_1450 COG0265 # Protein_GI_number: 15606621 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Aquifex aeolicus # 128 390 66 334 453 73 24.0 5e-13 MDEKNFIKEKIVGQKVSWKKRTVKALSLLFSGGVFGLGIFLVLFFLVPHLPVKKEGKEKE TVAFTEEASTEAESSTEETEAIEDVVQSEIQKFDFPISAYESMMGNLKSIIQEGEKSLVD VEVSTGGEDLLTEGKTRGNGIILEKTADSLLILYLGSGKGEEAYRIRFFREKEVEGRLLS SSKKDGVMILSVPLSAFTEKDMERLSVMPRGNSRLIQRGETLIGIGSPSGELYSTEITYA SYLSYDVPAVDGFREDIAVQGPKEGEGNVFYLNTAGEFVGFCSGKQGSFPHMTGISDCLD MLEHLSNGKTLAYLGLKIQNTSKSMIELGIPEGIFISEVEEGSPAYAAGVQAGDVIKKAN GEELTGVKDLQAALLKESPGNPFQISLLRNNGNQYVEMEFSCPLGTR >gi|333758476|gb|AFIH01000001.1| GENE 927 890889 - 891875 914 328 aa, chain + ## HITS:1 COG:BS_yhaM KEGG:ns NR:ns ## COG: BS_yhaM COG3481 # Protein_GI_number: 16078057 # Func_class: R General function prediction only # Function: Predicted HD-superfamily hydrolase # Organism: Bacillus subtilis # 18 299 11 289 314 160 34.0 3e-39 MSEHIPNPNRFIENFRDGTRVNNVYLVKTKNTALTKNGKEYLNVTLQDRTGTIDAKVWDP FSPGISEFSPLDYVYVEGNVAIYNGVNQLSIQRLSVAREGSFFPEDFLPVSKRDREEMKK ELLGMVSALDNPFLKKLLESIFVEDKEFLQEFSFHSAAKTVHHSYVGGLLEHTLSVAKLC RFYAEQYPDLNRDILISAALCHDIGKMKELSEFPRNDYSDEGQLLGHIMIGYTMLSEKIA LIPDFPTALRSEFLHCILSHHGELEFGSPKKPATMEALALAFADNTDAKLQTMREFIEQG EKSGKAKEGNGWIGFNKLLESNVRKSMF >gi|333758476|gb|AFIH01000001.1| GENE 928 891909 - 893624 1071 571 aa, chain + ## HITS:1 COG:BS_hemZ KEGG:ns NR:ns ## COG: BS_hemZ COG0635 # Protein_GI_number: 16081159 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Bacillus subtilis # 112 562 86 493 501 276 36.0 8e-74 MIQIFLDEALLPFESDIRELCKAFYPGEDFQMHTPEGVRLMETTQEEKNALKRAKEQKSA VPVNKKSLKRKDTEKQNRILTEEGISDPSFFHLSLDLRGAKLSFIGNRTKDKSTVKAYLY KILQKKCGRSLPWGDLTGIRPVSLAGKLLEELKNEEIQTEQEEIRFYQALKDEYCLEGEK AELLHFLASREKGILQKAEERSGVKIQDGFSIYIHIPFCPSKCAYCSFLSSPIGPFSDRI SDYLEKVSEELDFALYEMGERRGKTLQSIYIGGGTPTALPEKELEDLLVLVEQKLLSSPY AKVLEYTVEAGRPDSLEGNKLALLKAHSVGRISINPQTFRQETLDLIGRKHSIESVMERF YEARDLGFDNINMDLILGLPSERLSDVEESLLKIRELAPENLTVHSLAVKRAAKLKTEEN KYRGAYQAGASSEEFPLERDFSLSYIPSWRKRESRSEMEWMMLSAMQTAEELSLYPYYLY RQKNMAGNLENIGFSKEGKECLYNIFMMEEKHTVFGVGAGSSSKILFGNGRLERVDNGKD FRSYMEHFTEYQEKKRRVLEELSRIKEQGKD >gi|333758476|gb|AFIH01000001.1| GENE 929 893822 - 894769 998 315 aa, chain + ## HITS:1 COG:CAC0267 KEGG:ns NR:ns ## COG: CAC0267 COG0039 # Protein_GI_number: 15893559 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Clostridium acetobutylicum # 7 314 6 313 313 353 56.0 3e-97 MNIQERKVGVIGCGFVGSSSAFALMQSGLFSEIVLNDVDRERAEGEALDISHGLPFAKPM KIYAGDYDDLMDCSIIVITAGAGQKPGETRLDLVKKNVGIFKSIIPEIAKRKYEGILLIV ANPVDILTYVSVKLSGFPENRVFGSGTVLDTARLKYLLGEHLSIDNRSVHAFIIGEHGDS EIAAWSSANVSGIPLNDFCELRGHLEHDASMKRIAEDVKNSAYEIIAKKKATYYGIAMSV RRICEAIIRDEKSILPVSSMQHGEYGISDVSLSVPAIVGRQGVERVVPIDLSEEEKEALQ ASADTLKKVIDDAFN >gi|333758476|gb|AFIH01000001.1| GENE 930 895011 - 895979 341 322 aa, chain + ## HITS:1 COG:no KEGG:EUBREC_3455 NR:ns ## KEGG: EUBREC_3455 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 7 318 7 311 313 146 32.0 1e-33 MEILNKNIFGLNFQAEEINTKGLPVFMTAQRSFFRMSYKETAFLFVYLSKEERFGIVALE KQLSFLSDKYGIPIVFGFSAVTKLQRDKLLERNIPFITDNGQLYLPFLGMMLNNTFKKEK ETRRDKMMPVTQLLFLYMFYKSKGQAVMKKDAATAIGVTRTSITRASEQLAAMGLISQEM HGKEYYMRTDISGFALYKKAKPYLINPIQRILITETKNRYSEYVYSGESALAKVTMLNEP KIPVRAVYKADFKADNIKEIDPKWITEEKSLCLELWKYNPAMFANDGIVDPVSLSNCFDG NADERIEEAVEEYLEGQIWGQK >gi|333758476|gb|AFIH01000001.1| GENE 931 895964 - 896707 345 247 aa, chain + ## HITS:1 COG:no KEGG:BLJ_0106 NR:ns ## KEGG: BLJ_0106 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_longum_JDM301 # Pathway: not_defined # 12 247 12 248 261 234 48.0 3e-60 MGTEINSFIEKFKDYADCYTVIGGTACDILMTEAGTDFRATKDIDMILIMEARYKEFAHI FWEFIMEGGYRFGWKNSEKAHFYRFTEPRSGYPAMIELFSREPNYINFIPDGIIPIHIDE DTSSLSAILLNDDYYKFMLTGRRVVSGISVLDTEHLIPFKMYAWLDLKDKKARGEHVNER DLKKHKYDVFRLLQIARRDNKIETNGIVRENIIRFMEEIRMENIPFIQLLLPFEMQEALA YLGEIYR >gi|333758476|gb|AFIH01000001.1| GENE 932 897311 - 898537 1391 408 aa, chain + ## HITS:1 COG:RSc1983 KEGG:ns NR:ns ## COG: RSc1983 COG0133 # Protein_GI_number: 17546702 # Func_class: E Amino acid transport and metabolism # Function: Tryptophan synthase beta chain # Organism: Ralstonia solanacearum # 9 404 4 400 403 417 53.0 1e-116 MQLNNVDFETYLKNYPDANGYFGKYGGAYIPEELKKAMEEINHAYETISKSRKFIAELRR IRKEFQGRPTPISHLERLSEKINTGVQLYVKREDLNHTGAHKLNHCMGEVLLAKYMGKKK VIAETGAGQHGVALATAAAYFGMECDIYMGAVDIKKQAPNVARMKILGARVVEVNDGLAT LKEAVDAAFLAYMKEYKDAIYCIGSVVGPHPFPMMVRDFQSVVGIEAREQFLDMTGELPD AIVACVGGGSNAMGLFSGFLNDPVTIYGVEPLGRGTALGDHAASLTYGEEGIMHGFNSIM LKDEKGEPAPVYSVASGLDYPSSGPEHAFLHDIGRVKYDVVTDDETIDAFFTLSRMEGII PAIESSHAVAYGMKLAKTMNKGSILINLSGRGDKDMDYILEKYGTRSR >gi|333758476|gb|AFIH01000001.1| GENE 933 898970 - 899116 142 48 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|317496596|ref|ZP_07954943.1| ## NR: gi|317496596|ref|ZP_07954943.1| TipAS antibiotic-recognition domain-containing protein [Gemella moribillum M424] TipAS antibiotic-recognition domain-containing protein [Gemella moribillum M424] # 1 33 1 33 248 62 90.0 8e-09 MYLIKYVSEISGVSVRTLHHYDEIGLLSPQKKKMVIGIIPRRIYHSCK >gi|333758476|gb|AFIH01000001.1| GENE 934 899302 - 899703 220 133 aa, chain + ## HITS:1 COG:SP0739 KEGG:ns NR:ns ## COG: SP0739 COG0789 # Protein_GI_number: 15900634 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pneumoniae TIGR4 # 1 131 112 242 246 122 50.0 2e-28 MPTKEKFKGFSYQDNQKYKQAAIDLYGREVIEETIQKQKGKEQEITDGFNRIFFAFSENK SNGLSATAQENIQLAEELHKHLCRYAFDCPIDVFSSIAYGYVQNKEFKNNLDQFGDGTAQ YVCDAVQQYVKEQ >gi|333758476|gb|AFIH01000001.1| GENE 935 899863 - 902112 2368 749 aa, chain + ## HITS:1 COG:no KEGG:Spirs_0807 NR:ns ## KEGG: Spirs_0807 # Name: not_defined # Def: peptidoglycan-binding lysin domain protein # Organism: S.smaragdinae # Pathway: not_defined # 45 743 28 730 798 693 49.0 0 MHVKKWKPGLWIFLLCSLILVQLEAFAGIRMPMASPTLLATVSGTAESTAETLNAKVTEV EKFGNVVLDLSEERLYQAGYQVGDLLSLKLKDEELILPLCTSYSDVDTGKLLFRDDTGKK RLLVAINMGNFAKNYNVSVGDELRFSLKEKGGYQDELMIRKLTRTNNRADYSSDSVFANF RAVVGKGMPLGILYRSSNPIDNQFGRAAYADKLCEAFGIQTVLNLADSEEEAKALTKKDG FASPYYKSLMDKGNVIYLNMGVDLDSEDFGNKLVEGLRFLSQHEGPYLIHCTEGKDRAGF ATAIVSAFMGSDLSELEKDYMLSFENFFGVEENSEKYTRIFNSNLYQSLKKMAKGKDPKS TDLKLAAEEFLAAHGMSKEEMTAVREKLAKEATLPKPSVSGTVESVEKYGHLETDISISD FNALGFTLGDMVSVQMDNGYSFYAPYVDGYLVNAGDPLVRAYPGKEKIALCINYGKLNQV AKADKGTKVRLFLQKKGAYLEQYAIRKLTRSNNRADYASDEIFANFRNIKTTGIKKGVLY RSSSPINNELGRAAIANKLMEKHGIKTVVNLADSQKNIDTYLSKEDFQSPYYKSLLDSGN VALLNLGLNFRAVEFRKGITDGARFILEHDGPYLFHCTEGKDRTGFMAVFLESLAGADAK EIKADYMESYTNFFHVKKGTKQYKLIEEDVIGMMESISGSKDVSKKALQEGAMNMLRDYD FTEYEIQGLKDRLAGKAYVEPTVDGKNAA >gi|333758476|gb|AFIH01000001.1| GENE 936 902299 - 903342 1092 347 aa, chain + ## HITS:1 COG:L0064 KEGG:ns NR:ns ## COG: L0064 COG0722 # Protein_GI_number: 15673235 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Lactococcus lactis # 1 340 1 339 340 363 52.0 1e-100 MGFTLLHRLPSAEEVRKEYPLSEKLTEIKAKRDEEIKAIFKGESKKFLLVIGPCSADHED PVLEYCHRLKEVAKEVEDRIFIVPRIYTNKPRTTGEGYKGMLHQPDPEKRPNLTEGIYAI RKLHMKVLEETGFSTADEMLYPDNLTYLSDMMSYVAVGARSVENQQHRLVASGIDVPVGM KNPTSGDLGVMLNSIYAGQHGYEFIFREWEVKTDGNPYTHAIMRGSQNKHGQMLANYHYE DLKLLHSLYEKKELFHPAVIVDTNHCNSGKKYKEQLRIAHEVMHSRKYSTELAHFVKGLM VESYLLEGSAKVEEHILGKSITDPCIGWDDTLRLISNIYDYQSQTKY >gi|333758476|gb|AFIH01000001.1| GENE 937 903457 - 904497 835 346 aa, chain + ## HITS:1 COG:L0064 KEGG:ns NR:ns ## COG: L0064 COG0722 # Protein_GI_number: 15673235 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Lactococcus lactis # 1 339 1 338 340 364 51.0 1e-100 MGFSFLNQLPTTEEVKKQYPLSKELIEQKAKRDAEIKSIFRGESKKFLLVIGPCSADHED PVLEYCHRLKEVAKDVEDQIFIVPRIYTNKPRTTGEGYKGMLHQPDPEKRANLTEGILAI RHMHIRVLEECGFSTADEMLYPDNHTYLDDVLSYVAVGARSVENQQHRMVASGVDVPVGM KNPTSGDLGVMLNSIYAAEHGHDFIFWEWEVQTGGNPFAHAIMRGSQSKHGQMVPNYHYE DLKLLHSLYTEKKLPNPAVVVDTNHCNSGKKYKEQLRIAQEIMHFRKYSEELRSFVKGLM VESYLLEGSARVEEHILGKSITDPCIGWDDTLRLISTVYEYQALNR >gi|333758476|gb|AFIH01000001.1| GENE 938 904608 - 905828 824 406 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 [Phaeobacter gallaeciensis BS107] # 7 403 13 414 418 322 40 6e-86 MGVYEELQDRGLIAQVTDEKEVREMVNSGKAIFYIGFDPTADSLHVGHFMALCLMKRLQM AGNRPIALMGGGTGMIGDPSGRTDLRKVLTVEEIDHNIACFKEQMSRFIDFSEGKAILVN NGDWLRNLNLMEFLREAGPHFSVNEMLRARCYVNRLANGLSFLEFSYMLMQGYDFYRLYE DYGCNMEFGGDDQWSNMLAGTELIRKKLGKDAHAMTITLLTNKEGKKMGKTASGAVWLDP KKTSPYDFYQYWRNVDDADVGKCLRLLTFIPMEEIREMDKWEGAALNKAKAVLAFHLTEL VHGTEEAKKAEEAAKSLFAGAGASANVPSYTLSKEEYEDGVDVLNLLVLTGLAPSKGEAR RNVQQGGVSFAGEKVTDIGRVFRPEELSGEPLLQKGKKNFVKVLYC >gi|333758476|gb|AFIH01000001.1| GENE 939 906037 - 906582 544 181 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227873336|ref|ZP_03991597.1| ## NR: gi|227873336|ref|ZP_03991597.1| hypothetical protein HMPREF6123_1536 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_1536 [Oribacterium sinus F0268] # 17 179 8 165 167 153 53.0 6e-36 MFRKLVMTFLLLSFSCFGLMSFAGGKNVVESDLPYVDGKVNDPVSKSARTAYIFTENPTL SLNLSEGQKVEIVSYCNSYLKSEDRGIRNRLMKKTLTAGEKFTLLPEEEYQAAKEDGSLY NTADHCYVLRVYEDGSDRYEEYYFGIVEEDIFKDYQEKAKEKELLLKQKLNQYGPAAVKK G >gi|333758476|gb|AFIH01000001.1| GENE 940 906680 - 907288 479 202 aa, chain - ## HITS:1 COG:no KEGG:SpiBuddy_1139 NR:ns ## KEGG: SpiBuddy_1139 # Name: not_defined # Def: regulatory protein TetR # Organism: Spirochaeta_Buddy # Pathway: not_defined # 6 186 1 182 189 84 31.0 3e-15 MKNCELRERTKEKLATALISAMEEKALDKITVKEIIEKAEVNRKTFYYYFPDIYGLLEWV ISRESNKLITEIQNNRDYENALNDVLDSIEKHRHLLNCIKDSVGRVTLERVLYRELEQLA SWAMKIGICETGVAISEKELQILTELSISDIWRLLLLYFQKEISYKRDEFIQFILRYLKA SITAGLMEFGERDLARYASDTR >gi|333758476|gb|AFIH01000001.1| GENE 941 907424 - 909457 1912 677 aa, chain + ## HITS:1 COG:BH0721 KEGG:ns NR:ns ## COG: BH0721 COG1511 # Protein_GI_number: 15613284 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Bacillus halodurans # 64 663 40 599 599 103 22.0 9e-22 MKKNTMNRNKEIKIEMNKETKDAKRKIGKKERLMKGVAIVLVLSQVLLLPMMALASEENP RYHENYYALLSPTGELKQSSVVRQYEARGMQTVTDYGKYSSIKNLSNGVDAESDGERHVF HFPNGAPETLYIEGETSEPFAILPWKIAITYELNGLEVDPSVLAGEKGLVKIHVDFTRNP NAQDYAKKNYVLIARANFSMEDILSLKAEKAEVVTLGEKKEVMFVLLPGEEDSFDIEVGS NSFSFDGLQFQMMPLRSAQVEKIKDIQDSKKDMEDSYQALKDAGNDLLSNMESSRKSLRD MEKSLNDANASVKSIQEEGKAFQEERDKSYDSLDKLTESLTPVNGNISDLTATIGDTKKN IDGRKDSINRIQNSLRDLEESLTELRSDVPNTAKIEEAKGTVNALNGMLDSSRQETTAEV ISALDQKLQGNPLHDTIMNLVQGYSGLSEKEEATKKQLRTLLSDKITPQLDALSSDTRSG MSTGIDGLSTLEDSLEEVKTLQSDLTKAATTAEELGKNANVLLENSQIAMQDLTGALRSQ DSYLRGKREEVYKNLERNLDSASSAVRQGEAALGSTKSMQTAKDTMEDLIESKWEENTGE KTNLFEMDPDRAPESLVSGENENIVDVAVTLRTEEIKVDKSKEKTEESDAEPGVWEKIAA VFAKMFSGLGKLFKGGK >gi|333758476|gb|AFIH01000001.1| GENE 942 909458 - 911611 1911 717 aa, chain + ## HITS:1 COG:BH0720 KEGG:ns NR:ns ## COG: BH0720 COG1033 # Protein_GI_number: 15613283 # Func_class: R General function prediction only # Function: Predicted exporters of the RND superfamily # Organism: Bacillus halodurans # 8 686 5 678 687 355 34.0 1e-97 MSFSEKCANFIVKKREKIGLGFLLMLIVSLFLSFFVEINYDLSKYLPDWSLTQQGIHKME ETFGYPGTARVMIKNVTMGEALNYKNQIEEISGVDRVSFHTGENGAFAPNYMEGKTEDLD YKDGNALFHIVFVNGDSDLKTKAAVQEIEDLLGDKAVYAGLAVQSKTVEEQVSGQMGFIL GLGITFIFLILLLMTNSYGEPILFLLTILVAVGLNRGTNVFLGKVSFITNNVAAILQIAV SMDYAIFLLHSFELGLSKGMEKEKALSFAVGKSLNTILASSLTTVGGFLALCAMQFGIGM DMGLVLAKGVVLSLLTVIFFMPALLLRMWNFVEKTRHKSFLPSFRSLSNLAYHVSPLVLV LTLLLAFPLNIMQGMNNFRFSSSAVVMGEGTKISEMAEEIDFVFGEENLLIAIYPSGRND MESALGGTLKSLPFVKSVQSLSTALPEGVPEFMTPKSSLDLVRKDGYSRMVITLNLPGES EASYKAVNTVRQILKDYTGSDSYLVGDTTATMDMENILRSDNARVNTISLIIIFLVVMFS FKSALYAFVAMVPIEMAIMTNMSFSYLEGSQMIFIGFVVVSSIQLGATVDYAILALDHFK EEREKKERKEAISAAIRKSLSSLLVSGSILTVVGYVIYFISSVPAIGQLGKLIGRGALCS LFYVVFLLPGLLRVLDKALIRKEKIKEVVKEKREKLKESEEIQEKQEVLEIQEKKTT >gi|333758476|gb|AFIH01000001.1| GENE 943 911785 - 912354 587 189 aa, chain + ## HITS:1 COG:slr0922 KEGG:ns NR:ns ## COG: slr0922 COG0193 # Protein_GI_number: 16331675 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptidyl-tRNA hydrolase # Organism: Synechocystis # 3 188 5 190 194 169 44.0 3e-42 MWLIAGLGNPEKKYNGTRHNAGFAVIDALLEMLGGKGLESTKFHGAFTKLRIGTEEVVIL KPLTYMNLSGDSIAPMANFYKIPAEQVLVVSDEISLSPGSIRIRKKGSAGGHNGLKSIIA RLGTEDFPRIRLGVGEKREREDLAAHVLGHFEKEDEKRMEEAYTDAAKACICTVTEGIEK AMNLYNKKI >gi|333758476|gb|AFIH01000001.1| GENE 944 912364 - 913815 767 483 aa, chain + ## HITS:1 COG:SP0006 KEGG:ns NR:ns ## COG: SP0006 COG1197 # Protein_GI_number: 15899955 # Func_class: L Replication, recombination and repair; K Transcription # Function: Transcription-repair coupling factor (superfamily II helicase) # Organism: Streptococcus pneumoniae TIGR4 # 107 482 101 480 1169 124 27.0 4e-28 MLNNNEINREESTYTNPIEETLLFQSMRGSLGSGKQLFYTGIVDSLKPLLALPFAKNWAL YLCKSEERAKEVLQDCKAFSENVYFYPPKDYLFYKADTRGHYILRERGECLRHLLEDSGG MIVTTFPALMEKMEGKNAFRGSLFTVKVGMSIELSDLQDKLSEMGYKRAEQVEMRGEYSI RGGIVDLFSNQMEDPVRIEFFGEEVDSIRSFSLESQRSLEQITEAKLYPAGERGFSSSLK AFSLLDYFPKEAVIFLDEPQRLLEEAERVEEEFLNFFAAGTGTAAKSILGVNTDSKGLSG TALKRESEVKRQAGEDEEEHIALFSPETLLTEIGGRVFAAFSTLGTGMDSLSPAIDSGRL IEKTFTTKEIPAYGKHPGLFQEDIKRLFKEKYRVLLYSPSALRASRLAEKLREEGISAYC PDVFSIPKEGEKSIQVCTGFLRHGFSMEEEKLFILTEAELFGQSLSLKKKKRKRRRKVCA SAL >gi|333758476|gb|AFIH01000001.1| GENE 945 913797 - 915836 2097 679 aa, chain + ## HITS:1 COG:CAC3216 KEGG:ns NR:ns ## COG: CAC3216 COG1197 # Protein_GI_number: 15896463 # Func_class: L Replication, recombination and repair; K Transcription # Function: Transcription-repair coupling factor (superfamily II helicase) # Organism: Clostridium acetobutylicum # 2 679 495 1171 1171 703 52.0 0 MRIGSLTEIEKGDYVVHESHGIGIYQGIERITTDGVSKDFIKILYGDGGNLYLPVTKLDG IEKYAGKEAKIPKLNRLNGTEWQKTKARVKGAVKEIAKELLRLYAKRQNEEGYAFSEDTV WQKEFEEAFPYEETGDQILAIEATKEDMESKKIMDRLVCGDVGYGKTEIALRAAFKAVQD SKQVAYLCPTTILAQQIYNNFVERMKGFPVGIRLLSRFQSGKELKKSLEELSHGRADIAI GTHRLLSKDVHFKNLGLLVVDEEQRFGVSDKERIKSLKENVDVLTLSATPIPRTLHMSLV GIRDLSVLEEPPLDRLPIQTYVMEENEASVREAIERELRRNGQVYYVHNRVKSIADTAMR VQRLVPYARVAYAHGQMGERELEKIMLSFIAGEIDVLVSTTIIETGLDIPNANTLIIQDA DRMGLSQLYQIRGRVGRSNRISYAFLLYKKGKSLTEESEKRLKAIREFTELGSGIRIALR DLEIRGAGNVLGAEQHGHMEAVGYELYTKLLRHAVLLEKGEKTEEEGIECQMDVDFDAYI PESYIPNEEQKLEVYQKISTIGSEEEELDLKDELIDRYGDLPDKVENLFLVAMLKLSLSK IGVLECKIKRGEILMQFSPKAKLDTAKIPVLVQESQGEVRFQNGEQPALFYKKKNSRVQE KIEETMNKAGEIAALLSLN >gi|333758476|gb|AFIH01000001.1| GENE 946 916126 - 916398 276 90 aa, chain + ## HITS:1 COG:BS_hbs KEGG:ns NR:ns ## COG: BS_hbs COG0776 # Protein_GI_number: 16079336 # Func_class: L Replication, recombination and repair # Function: Bacterial nucleoid DNA-binding protein # Organism: Bacillus subtilis # 1 89 1 89 92 96 65.0 8e-21 MNKNELVSAVAKQAELSKKDAGLAVEAVFDTIAKALEKGDKVQLIGFGTFDVSERAAREG HNPRTGEAMKIAASKAPRFKAGKALKERVN >gi|333758476|gb|AFIH01000001.1| GENE 947 916403 - 916642 165 79 aa, chain + ## HITS:1 COG:SA0464 KEGG:ns NR:ns ## COG: SA0464 COG1188 # Protein_GI_number: 15926183 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) # Organism: Staphylococcus aureus N315 # 1 76 1 76 87 80 60.0 9e-16 MRLDKYLKVSRLIKRRTIANEACDTGRISVNGKVQKASYDVKVGDVISIRFGEKQVEAKV LSTKEPIRKDEAEELFEYL >gi|333758476|gb|AFIH01000001.1| GENE 948 916639 - 916947 339 102 aa, chain + ## HITS:1 COG:no KEGG:Closa_4064 NR:ns ## KEGG: Closa_4064 # Name: not_defined # Def: Septum formation initiator # Organism: C.saccharolyticum # Pathway: not_defined # 1 100 4 103 107 64 38.0 1e-09 MRRQGRKNRRIFGNGVTILGLVLVVALLAIVIFVRGNTLQKQNKNYLAMEESLEDELSKE ELREKNLEDRRVYSKTKEYVMEEAREIFGLQMPDEIIVKPEN >gi|333758476|gb|AFIH01000001.1| GENE 949 917015 - 917758 373 247 aa, chain + ## HITS:1 COG:TM0579 KEGG:ns NR:ns ## COG: TM0579 COG0037 # Protein_GI_number: 15643345 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control # Organism: Thermotoga maritima # 22 219 5 196 414 130 37.0 3e-30 MQSGTDTKLFFYIKKNQLILPGEQVLLAFSGGSDSLYLLYFLKELRKHIPFSLEAMHIHH GIREEEAERDLFFTKRKAEEWEIPFSFVRVDVPGFSEREGLGLEEGGRILRYRALERKRA EWESREGRKTKLALAQHMDDQAETVMHHLVRGTGIAGLSGMQSIEENKIRPLLCLRKAEI LERLHVLSLAGVEDSSNSDLSFTRNYIRKELIPVLERINRHAVRHIFEEACFFPSWKHIF GKKLFSS >gi|333758476|gb|AFIH01000001.1| GENE 950 917815 - 918012 200 65 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MEDAVLRREIYLETLRLLRGNTKDISRAHLSSVDKIIFAGNGKMVELPGKALGKINGKTL VFALL >gi|333758476|gb|AFIH01000001.1| GENE 951 918043 - 918594 537 183 aa, chain + ## HITS:1 COG:CAC3203 KEGG:ns NR:ns ## COG: CAC3203 COG0634 # Protein_GI_number: 15896450 # Func_class: F Nucleotide transport and metabolism # Function: Hypoxanthine-guanine phosphoribosyltransferase # Organism: Clostridium acetobutylicum # 7 176 1 170 178 182 54.0 4e-46 MAKGEDMKEEIEVLYTEQEIEDKVKELAAKIDEDYKGKAIHLICVLKGGAMFMCDLAKRL KNPLVTMDFMAVSSYGNSTESSGVVRIVKDLDESLEGKHVLLVEDIVDTGRTLSHLTKLL QERNPASLKICTLLDKPERRECEVEVQYTGFQIPDIFIVGYGIDYQQKYRGLPYLGGVHF KEE >gi|333758476|gb|AFIH01000001.1| GENE 952 918604 - 920673 1721 689 aa, chain + ## HITS:1 COG:STM0401 KEGG:ns NR:ns ## COG: STM0401 COG0366 # Protein_GI_number: 16763781 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Salmonella typhimurium LT2 # 104 623 106 561 605 256 33.0 1e-67 MGINRDALYSIGKGFYRDPEESPSFSKLTLRFRTAREDVESVSLILPEDGRELSMRWHSN DFYFDYYEIETEVEDKPLFYYFKIRKGEECLHYNRLGVTEDLREQYAFSVFPDFFVPSWV KGAVMYQIFVDRFYNADGKNNVEDREYIYLGRPVSAVQDWNAKIEPFDVHRFYGGDLEGV WKKLDYLCYLGVEVLYFNPLFVSPSNHKYDTQDYDHIDPHLGRLVEDGGEVLLPGETENR KASKYSIRSTEKANLEASDALFRDFVAACHARGMRVIIDGVFNHCGSFHRYMNASFFYKT GEGNPYPFGAFESYQSPYREYFEFAKKTEADWPFNDSYEKWWGNDTLPKLNYENAEALEE EIINVARKWISAPYFCDGWRLDVAADLGHSEAYNHSFWKRFRKAVKEANPEAVILAEHYG NPAAWLKGEEWDSIMNYDAFMEPVSWFLTGMEKHSDRAMPETYGDGVLFFNTMRYNMANI PENALDACMNQLSNHDHSRFMTRTNRRVGRIKADIDDAAVGIDPALFRLAAMLLLTWPGA PTLFYGDEVGVCGWTEPDCRRPFPWGEEDMELLDYHRYLLFHHKKLPALRNGALMLLEAG PNYAVYARITERQVAIIVLYTGETECTLPIPVWKAGVSDKMQMRRILKTDYRGYNAGQTC RFAKNGMIDCRMWAKTGKIYIVDLEEIEA >gi|333758476|gb|AFIH01000001.1| GENE 953 920858 - 921091 233 77 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227873313|ref|ZP_03991576.1| ## NR: gi|227873313|ref|ZP_03991576.1| hypothetical protein HMPREF6123_1515 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_1515 [Oribacterium sinus F0268] # 1 75 1 75 77 84 52.0 4e-15 METVKILIPNSEAVSDFVNKTSSLPFDVDLGSGNRLVDAKSLLGVLYLGVGRITELFAPK EKMTQVEEKLREYLVMA >gi|333758476|gb|AFIH01000001.1| GENE 954 921310 - 922731 1078 473 aa, chain - ## HITS:1 COG:CAC1267 KEGG:ns NR:ns ## COG: CAC1267 COG1686 # Protein_GI_number: 15894549 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Clostridium acetobutylicum # 1 276 40 315 425 161 37.0 2e-39 MDAKSGTVLYAKNEHAHYYPASITKVLTAIVVLEHVENLESKITFSTAATKDNLEPNSTV IGAVAGDKLSVRDCLYSLLLHSANDCANALAEYVAGSNSAFAELMNEKAQAIGCTDSHFT NPSGLNNAEHYTSAMDMAKIMQYAIQNKSFLQIDATQVYTHAPISKYPNPEDKENTVYAH HKMMRKSYREYYEGVFAGKTGYTLLAGNTLLTACKKGDTTLICAILNGHNSQYRDTKKLF DFGFSSFTSYPAEKNDSRFRNLESNWSVDGIPLLKSLHFTTGSNDQVCLPKGIPFQDVAS DLHYDLSEEEKAEGKIAKIEYRYEDRIVGTAYIYLEDEKTSNENSELSKTSLKKEEAIPK KISVELQKEEKNTEASVDSNPEKQNNAPLIFDKKAGKIILQKPILKLLKILLSLSLLTVL GLLAVYLFQRREEFYRARRRKRMLKHTKDLSREQKAKRDLLLEKKRRQKKERT >gi|333758476|gb|AFIH01000001.1| GENE 955 922878 - 925025 1741 715 aa, chain - ## HITS:1 COG:BH1154_2 KEGG:ns NR:ns ## COG: BH1154_2 COG0642 # Protein_GI_number: 15613717 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Bacillus halodurans # 473 709 38 272 274 221 48.0 4e-57 MKKFFIPFIHLFSVVLLLGSLILLHFAPEGNDAVSFLKEKSYLSSSAFDSAISESVNDIF DYIDLRDLFETKGTLDLNHTIAQSETNGATRSYSLDYLIKYARSMGYYLNEKNEIMEDGP ATVTKEQDEKEHQIRVTYRAYLPDYQPASPADGFMSLGRLAKEALGYLAKYYAIRSRYFD RGSNFQFYVNYTNGNNSTYYNNMEGVSAEQIWHLGKYIGTDSNSLEVKSNLNTVPSNLVP LLEARDPYKDGAYVFAAGVDTNFPYDDLYKAAYLSYSNRRQLTFLGLFLFIFSAVLTLTS FVILLFDTGRNEGRELTLYTFDKSPMEITLFLGLLWFYLAKPLTVYFFESLVLAVGNFPE PSFFSALCLFILRYFLLLPLFLSLVRKYKKSTLYSSSYLKRIWKLIGTYVEASKFARSKT FSYILFVFPNLLAFGLILYNGYCFVHRRSLLHLLFSTILLFVTISIDYYTYYISRGLQAA VNEQVKAERLKTDLITNVSHDLKTPLTSIISYVDLLKRENIQDERVQSYIEVLEHKASRL KNLTEDLVEASKASSGNITLELHPIDYNEIILQTLGEFQEKLEKRSLQIITEVPEGSILI LADGRQLFRVLENLFNNCAKYALLGSRVYITLTKREKDAVFTMKNISEAPLNISPEELTE RFVRGDVSRSTEGSGLGLSIAKSLTKLMSGKMRIEIDGDLYKVSLIFPLVEKEEK >gi|333758476|gb|AFIH01000001.1| GENE 956 925027 - 925740 875 237 aa, chain - ## HITS:1 COG:BH1153 KEGG:ns NR:ns ## COG: BH1153 COG0745 # Protein_GI_number: 15613716 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Bacillus halodurans # 3 231 6 232 232 275 61.0 4e-74 MQNILVCDDDKQIVEAISIYLAGEGYNVLKAYDGFDALKIMEKESLDLLILDVMMPGLDG IRTTLKIREKSSIPIIILSAKSEDADKILGLNIGADDYITKPFNPLELVARVKSQLRRYT QLGNMNESAKGDAVFSCGGLVINDDTKEVTVDGEPVKLTPIEYNILLLLVKNAGKVFSID EIYTSIWNEEAIGADNTVAVHIRHIREKIEIDSRKPKYLKVVWGVGYKIEKQGKPED >gi|333758476|gb|AFIH01000001.1| GENE 957 926084 - 926251 103 55 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MYFSLYKNIQKSFHFISIVKKWSFYNKIRYKGRWPGRVADYLWYDWKNLSQTDSS >gi|333758476|gb|AFIH01000001.1| GENE 958 926281 - 928254 1975 657 aa, chain + ## HITS:1 COG:SPy2066 KEGG:ns NR:ns ## COG: SPy2066 COG4690 # Protein_GI_number: 15675831 # Func_class: E Amino acid transport and metabolism # Function: Dipeptidase # Organism: Streptococcus pyogenes M1 GAS # 13 488 11 491 498 291 37.0 2e-78 MKKTVSVLLGSAMALMVVTSQVMTAFACTGVIIGKDLTEDGSTIFGRTEDLEVNHNKVYK VHEEAEYKAGESIKDVSVNPDNGYSYTFTHASYRYTSVSDTTPEYGYFDEAGFNEKGLIA DMTVSASANDEVLSVDPYVDGTDTTKPVGITEAIIATAVLGNCENARQAVEFIADEVATK GAAEGNGLVVADSKELWYMEIYTGHQFVAMKYPSDKFSVFPNSFWLNECNLTVGEEKENY NVSADGMYIYSKDIFKVASDAKTLKGDEASRSIDLYGSYAGELRDSTESRVCSGIKQFKP DASFDGKVYPFLQDTTKKITLSDVFAFTRNRLENLDKVADDLSRGDLYPIGNRNTMEAHI YHIPKTATAEYPGTMWLALGSPLTSPFVAYYPNQTAGIPEAQNESNEFNEDSVYWLAMDT LFMIEYNRELLQPIATEKINALESEELKDAVTTMMSAEEATALNQKDATKAFETLKEIHS EIKEKFQNYIKENDYTIHFSGKRATAAFTGAEVTVPKDSAEVGMKLQIKPAEEEGSGELQ IVDFYGNPVTEVKQELTYSIPTSAFSGKTAFFDGETEIASEVKDEHYVFSTKAVKISYKA GSAEGSAETTAEESSAATQEKTENQAESSKKVPNSVLLIGAAAFIIAAVQMRRKKSQ >gi|333758476|gb|AFIH01000001.1| GENE 959 928536 - 928991 220 151 aa, chain + ## HITS:1 COG:CAC3531 KEGG:ns NR:ns ## COG: CAC3531 COG1943 # Protein_GI_number: 15896768 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Clostridium acetobutylicum # 7 151 5 149 157 194 64.0 7e-50 MAKKEYALAHTKWMCKYHIVFTPKYRRKIIYYQYKADIRDIIAQLCRYKGVEIIEGHLMP DHIHILVSIPPKISISSFMGYLKGKSALMIFDKHANLKYKFGNRHFWAEGYYVSTVGLNE ATIKKYIQDQEKHDIAMDKLSVKEYEDPFKG >gi|333758476|gb|AFIH01000001.1| GENE 960 929187 - 930017 796 276 aa, chain - ## HITS:1 COG:CAC3250 KEGG:ns NR:ns ## COG: CAC3250 COG0796 # Protein_GI_number: 15896495 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glutamate racemase # Organism: Clostridium acetobutylicum # 5 270 2 253 256 210 43.0 2e-54 MNGENAKDSPIGIFDSGVGGISVLKALEKELPHENFFFYGDQKNAPYGEKTEEEVRALSL SAYRFLKEHGVKATVIACNTATSAAAPFLREKYPEDIIVGMEPAVKPATLFAQKIAEREG ECFPHSEEKKILILATESTLKGNRLHHLIDRLKDKGEYILLPAPGIVRLLEEGKGFGEEM QSYLKDLLKPYPKGSVSSIVLGCTHFPFVKKEIEKALGYSIPFFDGAEGTARETAHRLAE KNLLRKTGESKLTLYSSSGDNRLLESFYRLPLSAPL >gi|333758476|gb|AFIH01000001.1| GENE 961 930127 - 931068 1005 313 aa, chain + ## HITS:1 COG:BH3590 KEGG:ns NR:ns ## COG: BH3590 COG1493 # Protein_GI_number: 15616152 # Func_class: T Signal transduction mechanisms # Function: Serine kinase of the HPr protein, regulates carbohydrate metabolism # Organism: Bacillus halodurans # 6 313 3 309 310 251 39.0 1e-66 MKSTEKVSVSELIEKEGLKNLTPSINTDEVFMTIPDVNRPALQLAGFFDQFDSERVQIIG NVETAYLMTKDRPTRRARYAEITKYPIPCIIYARSIEPDSCMISACEEAGIPLLSSNRPT TELEAEVIRWLKVKMAPMITVHGVLVDVYGEGVLITGDSGIGKSEAALELIKRGHRLVSD DVVEIRKVSDESLVGTAPDVTKHFIELRGIGIIDVKQMFGVESVKDTQTINMVISLAEWS KEKDYDRLGLKDNFVEYLGNSIISYDIPIRPGRNVAIIVECAAINNRAKKMGYNAAQVLY DRVTKNLKKQEEK >gi|333758476|gb|AFIH01000001.1| GENE 962 931069 - 931944 715 291 aa, chain + ## HITS:1 COG:CAC0510 KEGG:ns NR:ns ## COG: CAC0510 COG0812 # Protein_GI_number: 15893801 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate dehydrogenase # Organism: Clostridium acetobutylicum # 9 290 26 303 305 199 40.0 4e-51 MEHLQGILLREYTSFQVGGKAKDLYIPHSAEELGELLKRFHEEERSFYVLGKGSNLLISD EGLEEPVILIRENLSGITFTPSGEEAVFTALAGTSLFELAKFAEEKGYTGMEALSGIPGT VGGAVKMNAGAYNREIKDIFQSGSFFRKNGERMDLDLGQMDFSYRHSAVEDDMVCLSASF LLQKGEAASIREKMEDYTTRRAEKQPLEMPSAGSTFKRPEGDYASRLIEQAGLRGFSLNH AGVSEKHCGFVVNLGGASAENIYSLIQEVIRIVKEKEGVQLEPEVKLWGKF >gi|333758476|gb|AFIH01000001.1| GENE 963 931929 - 932813 466 294 aa, chain + ## HITS:1 COG:CAC0511 KEGG:ns NR:ns ## COG: CAC0511 COG1660 # Protein_GI_number: 15893802 # Func_class: R General function prediction only # Function: Predicted P-loop-containing kinase # Organism: Clostridium acetobutylicum # 13 294 4 285 294 272 51.0 7e-73 MGEILKNSSAFCLILTGMSGAGKTVALKNLEDFGFNCIDNLPVGLLDKFIELFMQSNQGE RIALGIDSRNIQELDQLEEHLLFWEEEAQIRFQIVFLDARDEVLIQRFKETRRAHPLAKG GRIEAGIALERKKLAFLRKKADILIDTSKLLTRDLRQQLFSIFMEDKAYKNLQVSLVSFG FKYGIPEDLDLLFDVRFLPNPFYDSELRSHTGLEKGIQDFVMQDGKAEIFLKKLNDMLRF LIPLYIAEGKNQLVIGIACTGGKHRSVTICEKLYQSIKDLENIGLSLDHRDINK >gi|333758476|gb|AFIH01000001.1| GENE 964 933191 - 933622 474 143 aa, chain + ## HITS:1 COG:CAC0513 KEGG:ns NR:ns ## COG: CAC0513 COG1481 # Protein_GI_number: 15893804 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 1 128 188 315 317 131 53.0 3e-31 MIYLKDAGEIADVLKLLGAFNSLMEFENARILKEVSENVNRRVNFEAANINRTVKASVKQ QEDILLIKEMIGLERIESGLRELAEQRLQYPDASLEELSRGLSTPIGKSGVNHRLRKLAR IAKELREEIALNRNETEMSQDDF >gi|333758476|gb|AFIH01000001.1| GENE 965 933790 - 934050 333 86 aa, chain + ## HITS:1 COG:BS_crh KEGG:ns NR:ns ## COG: BS_crh COG1925 # Protein_GI_number: 16080527 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, HPr-related proteins # Organism: Bacillus subtilis # 1 84 1 84 85 64 38.0 4e-11 MRDNNITVNLPRNTEDHPVAMLVQIASRFQSRIYMSEGSRRVNAKSIMGMMALGLSNGSE LYVSAEGEDEEAAITAISDYLLGEAI >gi|333758476|gb|AFIH01000001.1| GENE 966 934165 - 937641 3216 1158 aa, chain + ## HITS:1 COG:CAC0516 KEGG:ns NR:ns ## COG: CAC0516 COG0587 # Protein_GI_number: 15893807 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit # Organism: Clostridium acetobutylicum # 3 1149 11 1165 1167 1061 48.0 0 MAFTHLHVHSSYSLLDGSGKIPEMIARVKELGMDSCALTDHGVMYGVIDFYKEAKKQGIH PILGSEIYLTENMEEKSLQKGEARYYHLVLLAENETGFHNLMKLVSLGFTEGYYYKPRVD YAVLEKYHEGIIALSACLAGEVSRALRQSDYEKAKKAALRYRVIFGEENFFLEMQDHGYP EQKLVNQGMLRLHEETGIPLVATNDIHYTYPEDAKSHDILLCLQTGKKLLDEDRMRYPGG QFYIKSEEEMRSLFPFCEEALENTARIAARCQVEIKFGEYHLPKYEVPQGYTSESYLKEL CQKGLERRYGAVEEEMQERLNYELSVIKSMGFVDYFLVVWDYINFAKTNGIAVGPGRGSA AGSIVAYAIGITDVDPIAHQLLFERFLNPERVTMPDIDVDFEYERRQEVIDYVGRKYGKD QVSQIITFGTLAARGVIRDVGRVLDIPYAKCDRLAKLVPAELNMTLEKALSMSKELKELY DTEEETRTMIDFCLRLEGLPRHSSMHAAGVVIAGSPVSDYVPLARAQDGSVTTQFTMTTI EELGLLKMDFLGLRTLTVIQDAIRFIEQNHGVHLDLDKLNYEDKEVYAMLSRGDCAGVFQ LESTGMVNFMKRLQPTNLDDIIAGVALYRPGPMDFIPDYIAGKKNPEKVEYDCKEMEPIL KNTYGVIVYQEQVMQIVRDLAGFSMGAADLLRRAMSKKKLSVMEEERKHFVYGNPEEGIF GCLSKGISEAVANRIYDKMIDFAKYAFNKSHAVSYALLSYQTAYLKRYYAPEFYAATMSS YMDNSVKTAEYIEVAREEGIPILPPDINEAEVGFSVKGGAIRYGLSAVKGVGRTAAETIL EERKKGRFKDFEDFVLRMSQKRLNRRAMEFFIHAGSLDSLEGNRREKLVMLSEVLENVQK GKQDSIPGQMSLLDLLGEDAGEKSEFSLHFPDLSEFPKAELLRNEKDALGVYLSGHPLDS DKALLKEVCTRKARDFSEEAQELQKEDGIKDDELCIIGGMLAGINKRITKKNDMMAFLTV EDNTGTVEAVAFPRIFEQAKEFLEEDRKIFVKGRIQKKDEGEAKLIAEKIIAFENLPKEI WIQFADKEEYERQEQSLHRVIDENRGECELVLFLKKEKAIKRLPKNRGIASGEKTKEALI ELFGKENTKEKVKSLKFL >gi|333758476|gb|AFIH01000001.1| GENE 967 937737 - 938714 1121 325 aa, chain + ## HITS:1 COG:CAC0517 KEGG:ns NR:ns ## COG: CAC0517 COG0205 # Protein_GI_number: 15893808 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphofructokinase # Organism: Clostridium acetobutylicum # 6 325 1 319 319 356 58.0 4e-98 MAKTAVKTIGILTSGGDAPGMNAAIRSVVRSAIHHGLKVKGIMRGYAGLLEEEIVDMDSH SVSDIISRGGTILYTARCKEFTTAEGQKKGAEICKKHGIDGMVIIGGDGSFMGAGKLSAL GINTIGVPGTIDLDIACTDYTIGFDTSINTAMQAIDKIRDTSTSHERCSIIEVMGRRAGY IALWCGVANGAEEILLPERYDGDEQAIINRIIESRKRGKKHYIIVNAEGIGHSSSMASRI EAATGIETRATILGHMQRGGSPTCKDRYYASIMGAKAVELLVEGKSNRLVAYKNGAFVDY DIQEALQMKKDISSEQYAIAQLLVR >gi|333758476|gb|AFIH01000001.1| GENE 968 938736 - 939794 909 352 aa, chain + ## HITS:1 COG:CAC3199 KEGG:ns NR:ns ## COG: CAC3199 COG0042 # Protein_GI_number: 15896446 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-dihydrouridine synthase # Organism: Clostridium acetobutylicum # 38 350 1 314 321 278 44.0 1e-74 MELNQNLDKIIQSHGIENFDAASFSEEKRKETRLFHPVQIGKVQLPGNILMAPMAGVTDL PYRILCKEMGVSLTCTEMVSAKAILYGNKNTDSLLEKGEEPGKRAVQLFGSDPEIMAEMA KRVEEDFDIIDVNMGCPVPKVVRNGEGSALMENLPLAEKVLRSMVKAVSIPITVKCRLGF TDDHINVLDFVKSAENAGVSAIVVHGRTREQYYRGKADWEWIRRAKEAVHIPLFGNGDIF TEEDAMAMLLSTGVDGISLGRGVQGNPFLIRRIRSLLENGVKDAALSTKERKDMMFRHLQ LMEKIKGEHLALLEMRKHLSWYMEGMPDAARWRNRVNQEQNLREVYKMVEAL >gi|333758476|gb|AFIH01000001.1| GENE 969 939981 - 940466 570 161 aa, chain + ## HITS:1 COG:CAC3198 KEGG:ns NR:ns ## COG: CAC3198 COG0782 # Protein_GI_number: 15896445 # Func_class: K Transcription # Function: Transcription elongation factor # Organism: Clostridium acetobutylicum # 1 156 1 158 158 117 48.0 1e-26 MAEGKKNLLTRAGLNKLEKELHDLKVNRRQEIAEKIKEAREQGDLSENAEYDAAKDEQRE IEERIVAIETLLKNAEVVDDAEEGTINIGCKVTLYDKEFEEEVVYHIVGSTEANSLQGKI SNESPVGMALLHHKAGDDISVETQAGPIEYKVLKVERSNEE >gi|333758476|gb|AFIH01000001.1| GENE 970 940534 - 942510 1965 658 aa, chain + ## HITS:1 COG:CAC3197 KEGG:ns NR:ns ## COG: CAC3197 COG1190 # Protein_GI_number: 15896444 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Lysyl-tRNA synthetase (class II) # Organism: Clostridium acetobutylicum # 13 506 19 515 515 558 57.0 1e-159 MDSVNKKGRAMGEKEQMQDMNHILKARYDKLKELQDAQADPFVITKAKQTHHSMEIKENF AALENQQVVIAGRVMAKRVMGKAGFLHVQDRDGKIQVYVSRESLGEEEYKAYKKLDIGDI VEVSGYVFKTQTGEISIHGEKIVLLSKSLYPLPEKFHGLQDTDTRYRQRYVDLIMNEDSR DVFMKRSQILREIRNFLAGRDFLEVETPMLVENAGGAAARPFETHYNALNEDVKLRISLE LYLKRLIIGGMERVYEIGRVFRNEGIDTRHNPEFTLMELYQAYTDYNGMMELTESMFRYL AEKVCGTLHISYQGTPIDLESPFRRLTMTDAIKEYAGIDFDKIQTLEEARALAKEKEIAY EEHHGIGDIENLFFEEFCEEKLIQPTFIMDHPLSISPLTKKKPTDPEKVERFELFIYGRE MANAYSELNDPIDQRERFKAQDALADAGDEEANHTDEDFLHAMEIGMPPTGGIGYGIDRL VMLLTDAASIRDVLLFPTMKPLEKKDESEGKKKVESGAENENNGFFTPNNKIDFSNVKIE PLFEEQVDFETFSKSDFRAVKVKDCVAVPKSKKLLQFTLDDGTGVDRTILSGIHAYYEPE ELIGKTLIAITNLPKRAMMGVESCGMLLSAINNKKDSDEEELHLLMVDNHIPAGAKLY >gi|333758476|gb|AFIH01000001.1| GENE 971 942645 - 943376 202 243 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|160946815|ref|ZP_02094018.1| ## NR: gi|160946815|ref|ZP_02094018.1| hypothetical protein PEPMIC_00774 [Parvimonas micra ATCC 33270] hypothetical protein PEPMIC_00774 [Parvimonas micra ATCC 33270] # 30 240 6 219 219 104 34.0 7e-21 MENMRCSVYILNVVNIIGDYFSDTEKFVTIKNFMSVLAIIISVANFIYTLHRNRKTDKEQ KKIKEENDKKYVQQERLAEERERLRNELYEEMTRASVIPYFNLFFTNENIEERADKVFLS VKLVNIGKESASNIQLNLLKSKDNSEVYIQSKTGRDYSISEYLSKYYALRGDEVTFIIVT NRDKGKDGMYEKVKDSITFSITYFDCIINCYRQAFQFEYGMGVFSLKNTSYRPERLKDNQ QDA >gi|333758476|gb|AFIH01000001.1| GENE 972 943587 - 943898 319 103 aa, chain + ## HITS:1 COG:no KEGG:CD0413 NR:ns ## KEGG: CD0413 # Name: not_defined # Def: putative single-strand binding protein # Organism: C.difficile # Pathway: not_defined # 1 91 1 91 103 118 76.0 7e-26 MKEEMININANLLDNPSFTSFERDSERVEAVNFTLVKKYGKGKEYINCSAYGDKVEKARD FQKGDLIHVFGYFKEREKEGKKYKNFLVKSYNKIEKKKENEEE >gi|333758476|gb|AFIH01000001.1| GENE 973 943901 - 944116 381 71 aa, chain + ## HITS:1 COG:no KEGG:CD1852 NR:ns ## KEGG: CD1852 # Name: not_defined # Def: putative conjugative transposon membrane protein # Organism: C.difficile # Pathway: not_defined # 1 71 1 71 71 97 88.0 2e-19 MDFFVQAVNTLQILVMAVGAGLGAWGVINLMEGYGNDNPGAKSQGIKQLMAGGGIALIGL KLISLLANVIK >gi|333758476|gb|AFIH01000001.1| GENE 974 944128 - 944778 608 216 aa, chain + ## HITS:1 COG:TM1085_2 KEGG:ns NR:ns ## COG: TM1085_2 COG0073 # Protein_GI_number: 15643843 # Func_class: R General function prediction only # Function: EMAP domain # Organism: Thermotoga maritima # 102 215 2 108 109 84 44.0 1e-16 MFEILDKIEEFFRELLQGGIQANLESMFLDLNDKVGSVATDVGQTPMGWNSDVFQFPTMK SLEKKDEGNRASKGNENKICDQVATVPGKIDFLNVKIEPLLEEQVDFETFSKSDFRAVKV KDCVPVPKSKKLLQFTLDDGTGVDRTILSGIHAYYEPEELIGKTLIAITNLPPRAMMGIE SCGMLLSAINNKKDSDEEELHLLMVDNHIPAGAKLY >gi|333758476|gb|AFIH01000001.1| GENE 975 944978 - 945085 176 35 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFVFLCIDFMMVLLYLIIGIIFMGLLVRYFENDNA >gi|333758476|gb|AFIH01000001.1| GENE 976 945072 - 945821 419 249 aa, chain + ## HITS:1 COG:CAC1450 KEGG:ns NR:ns ## COG: CAC1450 COG0596 # Protein_GI_number: 15894729 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Clostridium acetobutylicum # 14 248 14 244 244 92 26.0 7e-19 MIMHDWNNEKENVILLIHPMLSSANGMKTFIADIIGEEYRYLAPDLSAHGDADKDTYKSA ADEAKQIHEYLVEKNISELSLGYGASLGGVVLLQLLKYDDIAFNHLFFEGSSFYTNAKMM EWILRTVFLHKHKKAVADPELSVKKMSSMFGEEAAPLLAKHFIAMNEESIRNIVHDCAFV ELPPLSGDVQRKCVFSYGDKDFDYKKAKKMIPKTYPLAQIKVWEGYDHCRMMTKEKNNYC RELEKCIQE >gi|333758476|gb|AFIH01000001.1| GENE 977 946044 - 946274 244 76 aa, chain + ## HITS:1 COG:no KEGG:LBF_2184 NR:ns ## KEGG: LBF_2184 # Name: not_defined # Def: VagC-like protein # Organism: L.biflexa_Patoc1_Ames # Pathway: not_defined # 1 65 1 65 76 81 50.0 1e-14 MMTAKVFKNGRSQAIRLPKECRFSSDEVVVNKIGDIVILLPKQNKWDSFMRAVDMFSDDF MADGRARDIVQEHEAI >gi|333758476|gb|AFIH01000001.1| GENE 978 946329 - 946493 146 54 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFVFLCIDSMMVLLYLIIGILFISSNGRAIRYLTGHDLDENISNKSKELMHHLW >gi|333758476|gb|AFIH01000001.1| GENE 979 946501 - 946644 103 47 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKWSLCFIIGFAIDLLWVGAGLILAAILNTVLIIRLMVLRDHFEKDK >gi|333758476|gb|AFIH01000001.1| GENE 980 946832 - 947167 323 111 aa, chain + ## HITS:1 COG:no KEGG:Amico_1748 NR:ns ## KEGG: Amico_1748 # Name: not_defined # Def: transcriptional regulator, XRE family # Organism: A.colombiense # Pathway: not_defined # 9 111 10 112 114 97 48.0 1e-19 MEQKELHLRLKKLRKDCKLTQEQMAKYLGVDQTLITKLENGTRAMSVTMMDQLCSLFGCT EAYLLGQSDAYIPLNFAFRANSIQGEDLQSIAAVNKIAMNIRYMNEKLKEE >gi|333758476|gb|AFIH01000001.1| GENE 981 947169 - 947921 523 250 aa, chain + ## HITS:1 COG:no KEGG:Msm_1529 NR:ns ## KEGG: Msm_1529 # Name: not_defined # Def: putative Zn peptidase # Organism: M.smithii # Pathway: not_defined # 1 240 1 233 242 196 45.0 9e-49 MKTAQELNSLALETRRILGEDSYSPIDIFAVVNGWKEKRITIVKYPLSQRISGMCTKVDE DIIICINSTTSYGRQRFTLAHELYHILYETIDGRVVCDMYMGDDKTDSEKEADMFAGYLL MPYDTLFQYAKKFDGWTLNKIIDLEQLYMISHMALLFRLEKDGFVSANSMSPFKDIKISR EAAKLGYGKELYLPSLEGKQYFTTGEYVRKVEKLSEMGLISEGKKEELLLDGFRADIVFN LDEEEGYPND >gi|333758476|gb|AFIH01000001.1| GENE 982 947914 - 948450 249 178 aa, chain + ## HITS:1 COG:no KEGG:Dtox_2246 NR:ns ## KEGG: Dtox_2246 # Name: not_defined # Def: hypothetical protein # Organism: D.acetoxidans # Pathway: not_defined # 1 175 1 176 176 199 53.0 4e-50 MTDELFFDTDCLSAFLWINNTNILQTLYSGRIVLPEPVYQELSNPSIPHIKQRADKLIST NVASVQQIVTGTEEYDLYSSLIKGIKGEKQIGRGEAAGIALTKTYNGILASNNYKDIALY IKRYHLKHVDTGHILMEAMEKQIITELEGNTIWQNMLNKNRRLPETSFTDYLRKRSSK >gi|333758476|gb|AFIH01000001.1| GENE 983 948573 - 948803 222 76 aa, chain + ## HITS:1 COG:no KEGG:LBF_2184 NR:ns ## KEGG: LBF_2184 # Name: not_defined # Def: VagC-like protein # Organism: L.biflexa_Patoc1_Ames # Pathway: not_defined # 1 74 1 74 76 81 48.0 9e-15 MMTAKVLKNGRSQAIRLPKECQFSSDEVVVNKIGDIVILLPKENKWDSFMRAVDMFSDDF MVDGRTRDTAQELEAL >gi|333758476|gb|AFIH01000001.1| GENE 984 949086 - 949703 595 205 aa, chain + ## HITS:1 COG:FN0473 KEGG:ns NR:ns ## COG: FN0473 COG1309 # Protein_GI_number: 19703808 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Fusobacterium nucleatum # 8 125 9 117 189 60 36.0 2e-09 MSNRDTSIDPRLLESARKEFMEKGFIKAELKTICENAKITTGAVYKRYKGKEELFSVVVE EAVATLDHFVSERTDVDFSSMSDEEVRNTWIMNEKYILDVFRILWDIREEFVLLLEKSAG TVHENFGHDFAFRMTHAYTQYYEEAKKRNIAKAEITDQEMHVLCTTFWTSVYEPFIHKMS WREIEEHCKVLCRFLDWKKAVGIMD >gi|333758476|gb|AFIH01000001.1| GENE 985 949876 - 951621 234 581 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 332 562 2 238 245 94 28 2e-17 MFKKVAPYMGEYKKYTIRAVIMMCIGIVAKTMPYFFLYQIISPLTKGQSISLGYLMLRVL GVLLSEIIYSFAYVKGLIFSHISAYNTLKNLRISLQGKLEKQSLGNIESLGTGRIKKVFT EDIDMIELLLAHAIPEGIANISIPFAILVLMFAVDYRLALLSLVPIFVGIFAMGMMMKQG SSKMDAYYESAAVMNNTIIEYVNGMEVVKVFNKDGDSYKRFGEVVKNYRDFTLLWYRACW PWMAMYSSVLPCLALLILPVGVFWVISGSLALDKLILVLCMSFAVGPSFMKAMHFAGNFP QLNYKIAELEHLMDKPALKEGSARFSGGNRDVQFENVRFAYGEKEVLHGVSLELAQGTTT ALVGESGSGKSTLAKLLVHYYDLSDGKIRIGGQDITDLSLEALNNEVSYVAQEQFLFNTS LYENILIGKPEAKREEVLKAASRAQCDEFLKRLPDGIETMAGDGGKQLSGGERQRISLAR AILKDAPIVVLDEATAFMDPENEEKLNAALDEITKNKTVLVIAHRLSTVKNADKICVIKE GKCIAADKHEKLLEECPEYKKFWDASVSASTWKIKGGEKAC >gi|333758476|gb|AFIH01000001.1| GENE 986 951615 - 953396 237 593 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 301 572 219 502 563 95 28 7e-18 MLKILHRIVCMTGKYSSRIRASYITSFIKGIMMKAPLIFSFIAISLFMKGQMQEKICLYL GIGLALCIAVESVFEHITNVLQSATGYEVFADMRMRLGDHLRKLPMGYFTEGNMGKISTV LCTDMVFIEECCMTVLSELVTFMISQGLMTLMMFVMDVRLGIAALTVIIAFVIVGNCMMK TTLAHSRTKQEGSESLTEEVLDFSEGIGIIKSFNMLGEKSKSLSAEFNKSCRESIDFEKS YGPWARALYLTYGIGTSFMLAVAGLLYAKGEMAPDYMVGMVLFLFDLFISIESYYGQITR LTVTAASLDRIEEVFEAEELRDSADTALSTDGKETRKDSADTVLFENTKEAQNDSVVEYS DVSFGYTGKNVLNHISFSMKKREMTALVGPSGSGKSTIASLLARFWDIREGTIKLNGKDI KNISLGSLMDQISMVFQRVYLFKDTIYNNIAMGRPSATREEVIEAAKKARCYELIRSLPE GFDTVIGEGGASLSGGEKQRISIARCILKDSPIVILDEATASVDADNERAIQEAISELCK NKTLLVIAHRLKTIKDADQILVVSDGRIIERGNHDKLMKEDGIYARMISVQAS >gi|333758476|gb|AFIH01000001.1| GENE 987 953539 - 953868 211 109 aa, chain - ## HITS:1 COG:no KEGG:EUBELI_20442 NR:ns ## KEGG: EUBELI_20442 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 1 109 1 109 109 146 72.0 3e-34 MRWQIEYLEEAKKDLKKLDRSTQIIVLKGIDKVSENPLPAQQGGYGKPLGNKSGTNLTNL LKIKFRDIGIRVVYKVEYTDTVMKIIVISARADEQVYKEANKRKTRHEL >gi|333758476|gb|AFIH01000001.1| GENE 988 953865 - 954185 343 106 aa, chain - ## HITS:1 COG:no KEGG:EUBELI_20443 NR:ns ## KEGG: EUBELI_20443 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 1 106 6 112 112 110 57.0 2e-23 MAYTADILDSLVPITQFNRGQASRIFDRLHTENQLIVLKNNQPAAIILSPSEFQRLSEIE EDYILLLEATRRLKEDSSSTSSREDVMSELGISEADLAAAGDVVME >gi|333758476|gb|AFIH01000001.1| GENE 989 954469 - 954621 135 50 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIPYISGALNSLLVYMEAPFVAYFILAIPAELLWRKYVEQTYLSQLQALL >gi|333758476|gb|AFIH01000001.1| GENE 990 954969 - 958691 1481 1240 aa, chain + ## HITS:1 COG:no KEGG:RHE_CH01994 NR:ns ## KEGG: RHE_CH01994 # Name: yhch00582 # Def: hypothetical protein # Organism: R.etli # Pathway: not_defined # 293 1232 275 1234 1238 139 21.0 7e-31 MIIETALGELAKAGGMELFLSSSESLLKKVKASKDIKQLFINTGEFFVDYENHADQLFDD MAIVLSKENMTKLANELKDEPGYKLKDRLLNSLMGIMKEYEIPHGIALSYANAILFAIMG QLPVVAPDKYDRVYQAEWKAEQEESFKDLAEKIEGLKNELQIYQSRQLEILSADAIDLDI RRQTIAPKIGLDFFNVDDDTFKEALASKKNDEVVAIKARCKEEAIYCTVNELWMQGEKRP IFIVKKEEDWKGLLKIKGAGNVYIPWFYSEQIVAIPNNTNIFVFTERVPSFIKGEIILRP RTYSTILASLQRAGMDINKANKLVSETHGLFVPLKKKLFNGAYLKEPRWLKGLQRNIKDT ALLIGQWTDCDGDRAVIECLSGIRYQDFISEIKEYAKDEDPFIIIVDIDSAKEYYLASAE NAWDYIDVDNDSEIWKKFKDVLLEVINEAEKLFTYSSQEKLIAQFNREKLFWSEVIRKGM LRSLIMKAYYKKDNNCQVQLDALVNKILGYIQSSKQWRYISNFFVDLCEVSPNSVLNKLE EEPINPTGLMELFENQSSDFLFGENDYIEILWGVEEFFVQREYAFRAYEWLLYLDNLSFE YKSNSLKDIFWKLLCTWHNFSAFSKSEDKIEIAEKALAKDRNAWEHIFGALPKGHRSIMG GLHVPNYRNHVEEGTITRKEMFDTSLGYIYLLLKATDFNPKRWKDLLEIYDVVDSEIRKK IKEKLLFEIAQMDDDERLIIKNDIRRLVYRHRYFASAEWAMGEDLIGELIEILDSINFTQ KEYDFEYLFIPSYDGIILDPIPYNVDDKRDINESKTKNLTIQKIKEFKQNNYSLELLSKL CAQEEHSCLGRVLADYWAGVNFDKNVFVSLYNCQSKHEMAIEYIEGLACRGVDVYTNVNE LSESVELDDDFRIILFRIEAIYTDKKPSVDNASVEIKRAFWKDFRWFSSNNMDWAVAECQ QYGTVNSYLELLYLFHKNRRLTPEQLLEKMQGIDMLERGNVNSLTDYYLKELLRPLQEQY IIDQEKCAKIAHIEIAFFYLLDWDDMKCFQKEIKYDPVMYAEMVSIIFRHEDDDPEERKA EEFQNYAKVIRELFYRAKFCPCEENGVVSYGKIKAWVDKLIRILDSNHQKEMSGYVLGRL LAYAPKAANGHYPCEAVCQIIEEYGDESLLSEYSCELFNKRGMFSPTAGKAEKDIAEAYK ENAEFLSIKYPKTANVFFKISQIYLYDSDMERRRAENSYF >gi|333758476|gb|AFIH01000001.1| GENE 991 958851 - 960191 794 446 aa, chain + ## HITS:1 COG:FN1101 KEGG:ns NR:ns ## COG: FN1101 COG1373 # Protein_GI_number: 19704436 # Func_class: R General function prediction only # Function: Predicted ATPase (AAA+ superfamily) # Organism: Fusobacterium nucleatum # 8 445 25 452 470 155 28.0 1e-37 MKKSVFTRKIYREILEWKENRSDKYALLVKGARRVGKSTIVEEFAKKEFKSYIIIDFAHV SKDIKDLFEDTYDLDFFFLQLQQLSGTKLYEKESVIIFDEVQLLPKARQAIKYLVADGRY KYIETGSLLSIKKNTKDILIPSEEHKISMYPMDFEEFLWAIGDEVSIETIKILLEKKRPA GNAIHRNLMRIFRLYMLIGGMPQAVETYLEKNNLQEVDEIKREIVDLYEEDFTKIDASGL TGDIYDAIPANLSSNASRYILSNAREGIRSERVRDLLPDILSSYTVNIAYHANNPAVGMA LEKDVGRYKLFTSDVGLFVTLAFRDKNYIENIIYNKLLSDKLEANLGYVYENAVAQMLVA KGNNLFYYTMGNNSSNHLYEIDFLISTGNKICPIEVKSGNYRCHKSLDQFCDKFRSRIGN KYLVHTKDYKWENGINYIPVYMLPFL >gi|333758476|gb|AFIH01000001.1| GENE 992 960231 - 961574 939 447 aa, chain + ## HITS:1 COG:no KEGG:Cfla_0519 NR:ns ## KEGG: Cfla_0519 # Name: not_defined # Def: zinc finger SWIM domain protein # Organism: C.flavigena # Pathway: not_defined # 2 443 4 435 441 357 43.0 4e-97 MREFKSISGLYDGNLALSIAPALTPKGIEENPLFFQGEIVNPAIIAGGILVLADIVSTRY FQYVPVAQKDPVLSAQGDRLRAECFSACNGVYARLDIFQTALDGEILYGTTNVDIGVKLR QALCKIKQGDRLKFLIGDEGWKSLHSKKLSDGTLLTDILIERLVEMPDRWIRALGNCAVL HQKMKYKFHLEGMQAKAFIAGLPPVTGKEQSGWLCPTKTGAILKLREEKDSVYISGLHRL SALKRLMSHVNRINFYAPEGTAPGQMMIEVCMSGASITLSLTAKSYEGYSGEGALLEALS NLETLECADRIDNELNFEPKIKLENISASLGLDKKNVHDAMELLAVSGKLGFDVHENAFF HRELPDDPDRVLKDNPRLVAAKKLMEDTVFVEDSLWYVQSGETNYRVIYPEGSGVENAKC TCTWYLKHKNSRGPCKHILAVKLRKGI >gi|333758476|gb|AFIH01000001.1| GENE 993 961701 - 965207 2357 1168 aa, chain + ## HITS:1 COG:no KEGG:Cfla_0518 NR:ns ## KEGG: Cfla_0518 # Name: not_defined # Def: hypothetical protein # Organism: C.flavigena # Pathway: not_defined # 8 1168 10 1099 1101 450 31.0 1e-124 MASKLERAVEIYRSLGYEETAYEDILSLGIGTKEEQGIARDGLKSGEWVQIKQLSENSYG FAPVVDVDLKKLAVFAVRIGVEAKRAANVIGRGDEIALQAIMDRGENYAIQFISAAESGN RRAWEHSLSVLGMLCLKLLHRMNLPIPDSVEYMKDWAAASSVILLGAKKDYLFDESFTLE KEEILRRFIEHIEKGISLNMPGTGPFPELLFFGVEKHLLSKEAAKEYIFDALYIAKRPGD RKAWVELLDKLGCAEKDFMDRAENLIPLLGLGESPLLERFAPVLIENISEELLYPVLISC TSAKVKKTKKMLLNSALKREKPKSANDFAEWLSLYLQDEDKSIAGLAEKLVLSWGLILEQ EESNKELRGLWRESPKLWEVPRFSLGEGTAESLTDMVALLSDRKECVEDLLFEQFLALAN HIAYKNPEEAKMSLLGIPNSDSGILWTLGRWARGIETKPVEESRQRFWQGEKEIVRIEYR ELLTMRRENLFRTIGQWPCLLSTPSFEDLSISVVDFLERLSLYRAEKFSYVSEPDLQLAL TRLDMERFAKEDRSKCTEKLKEIDLKVQLPSGEFLQDEEGKDILLGELIAAYLQDPYVEP DFFPGETPYWKVELKTPESLKALPYRLAYSHNALFSIFPNWGDYSLTAVHRDFEVYHGQG IILRQLARRRKPLSKGALMNWIAVFGRLSDENAEDALKANQEAWERGLLLPGLADISYLD WSGGELSNLANLAAAMDFMANEGMLSLVWKVACDAVEQSLNSPRILAGTAEIVKLLRDYL DETIFAVEKNLASKEALEMKPIRILAGKSGSSKAVSYAKEILEKLLSIETEQIQSTENIG FREKFNLKDGAALKDDVDLNDNRSLRENRGTIENTSKSKTIASVETPAPADFEKVWLPLP EGKELIEDHATFRIKAIELRKKEKVFQFDLDLPEDSDCSYRVVIAGWLYGLAHEGQVSGT KIDRRGDRNDKIDAEKEVWLHYDKEKGKLVVSEFRNWRGGDKAPLEGEATPYSKLFLSFV VALLAQDGDSIYGAKSLFKELVQSGTLSLKIVREITRLLLSYEEISPAKLVRIVEKESEL LSICWGMLWECIKDAGAKTVETGKPPAWINRILDICIYYAVYLREAAKRGSISKEDALWP GLLEMANCGAKSTAVKKAKELFEILGIA >gi|333758476|gb|AFIH01000001.1| GENE 994 965404 - 966147 579 247 aa, chain + ## HITS:1 COG:PA1088 KEGG:ns NR:ns ## COG: PA1088 COG0500 # Protein_GI_number: 15596285 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Pseudomonas aeruginosa # 4 245 6 252 253 111 28.0 1e-24 MAGRVYGEKVSIDTKGTVSFYDQRAKTIKNREQEYTTVLLGDQDPEYAVKWDEYEKGFIL PKLGLNRNKVILDLGCGMGRMADAVSDQCKEYYGVDFSSEMIAVAKQNSGNRNCHFYTMS IVDALSNPQITTPQYDIVLMAGVSMYINEDELMESYRLLRRLVNQNTLLYFEESVGKKER LTLDHIWSENLKDYYGAIYRTREEYKSLIRECMKGAEFVEEGYMNFLDKKEQSETSHWYA LLKCRED >gi|333758476|gb|AFIH01000001.1| GENE 995 966233 - 967753 855 506 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MEIHLKSRTVKYVSVTVAFLLVTTFLLYLFNMDKAIESLPEINYFDLLLGQIANTLIVLS LTSVLSSNFGQAYWVDIKETKLIKPFWTCFTGITVYLLTALLYSILMYAIGRYAGVLLSA VFSTVLLVILSFQMISIYFGKEGIKKQLREEYEQLLRLTNYPYVSDYLYKIKKLEKELRE CASPEKEDLCRALQTEIRGLEKKLNSGDEKQVEEAHKEYVKRSVDAHETLKNIDRKLEEY TKNAIKNNDSEVIIENIELLVSAENDITLFRLMEDLFSWDERYCCKVLRQVNERGTNFII NREMHFFKRFALQKLMEGSGKLSAIQFLLSIYDQSNLGMKNLREDLKRIDSERQKLRSKE LELNKVMLGDEDIGEGYRKVKRENKQLEEEKKALEEEILTLLGSCTTKDLRSYYLPLEEC YRAYEEGKYEIANKYITVILECFRVDIDLIRFDTGIMDIPDSGISFSYFTEEEFSIVERL IEQDKLKAAISEMNKKALLSMKEIKL >gi|333758476|gb|AFIH01000001.1| GENE 996 967809 - 968579 809 256 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNIYLQLGLGLLPGAVVATVLLVKRKAFQVQKIIISLLLLVLSGGLLFRGLSAFASELKH KPVLSQKKMTEFMNALIDEKAYPEAEEVIEQYSEAYGYDDECRLATARMALLQGEYDRAY PLYLYLSENTKLISKKSEELLLASEQMQDPLSDVIMADYLTSQGKDITEYGYSKEQYETA KKALEKQDGKIEKKVEKAIQSSYSVSKTAKEYAEAVSEVSADYANIGEEETKSTAKYKKL FSEMEEKIRSISLLIP >gi|333758476|gb|AFIH01000001.1| GENE 997 968690 - 971965 2505 1091 aa, chain + ## HITS:1 COG:no KEGG:Desac_2944 NR:ns ## KEGG: Desac_2944 # Name: not_defined # Def: VWFA-related domain-containing protein # Organism: D.acetoxidans_DSM11109 # Pathway: not_defined # 266 481 69 285 543 89 25.0 7e-16 MGNLVGEKDFSDAFQSIDSRDAEQLTRQLNKIYRNIHEDMTVQERKALKARVEALDRQLE EPVLYTIKENLTKAAEEEAGTDATKVNLELAKIENYFGNEVSTDQYLREAIYSSQDNEDD SYVAAMSQIIGVIENDDEDESENIKNVSNYVDTVLDHSLTVDVEEIISSKADAVMPEQEN TEDADTSVDSKKQKKTKKNSSDTEEEEKNKKFSQAAVEYVSKAKTAISIGQINTEKFEEI TAVVQIDSNYSDVKDLQKALKLYDCGTEITDFSIKKLDYTASNIILVCDVSGSMQGSIED LRQSVLRFIQDKNKNENLSIVTFNDRIVDAASFGASDDKLIDLAESMEADGGTDMFHAVV DSLSNYGTKSTESNVLILMTDGQDNYPKTAEEIQREIGKKAQQQGITIYTMGLGNEVDTA YLSTIASSGNGKFVYVYDSSSLSSFYDMLHAQVYSQYEVKYKAEDTLTMSGRTLELTLPA ENSRDVKTYSLEGAADNENALGAMQDVRIDGVFPRFVYKGMQDTTVRLKGEGFQEKDKIS VKLNGNIDYTLTTKYIDKETYEMTVPAGIAVGSYNVEVSFNGKKKVIQKGFSVIADGDQK KTVFGPYVFTSAEKIENAENDYTLSGAVTLNGWLHFKGDIHLQGDLENDGSISVSDYDGS YIQYDVSGSEGIAKYMAEKGIAIQFPRLEDFRLYNDPQNIYDYKKYKVDDISTGLLEVVN LTKFDKVTARLYPNSIGFYYKTGTTILPYQKQILKATGNLQLFKFSAESDAIFTNKKIGV LIDVSYKDPSKSEFIHKINFMNSPVFFNGEFKIHVDTIKNEYTVGGLIRFDFFMDGGVGA EISWKENLIPNYAQVTTELPKAIKLPTAIPVEVNDFTFKVSDIDKAAEKGAWASLKFTGK ASLSTLKIKEYIPELKPFVGDLSLLEMPETEATLRVAPITAEAKAKLKFLSEIQLVDAEL HIGTFNYSNSLLALDDIEVGGLSAKVKAGLFWETADKRISIDSTGTGELDAHSRFVGLYY VGTTKYDISWWMISLEHKKEGEMAFGLYRNHDGKLQLIFTTRNQDSDGKVRGEFYYIDEN GRIGNRNGTLT >gi|333758476|gb|AFIH01000001.1| GENE 998 971982 - 973808 1469 608 aa, chain + ## HITS:1 COG:no KEGG:bpr_II250 NR:ns ## KEGG: bpr_II250 # Name: not_defined # Def: hypothetical protein # Organism: B.proteoclasticus # Pathway: not_defined # 30 134 79 193 294 67 38.0 1e-09 MLKNIRKISFILCFLLLFSLFPFTAYTEPKQSIIANLSTPGDLTVMFTYDAEKVDITFIS PSGERLGAGSEGVEMKEGDLWRTYRIKGAAAGDWSVEYDLGSNKEINYSILRDNYGLWIQ YFTLGELKEDGIDLSFQADFEGENVYYTYEIYAISSSDPENRNKIMDGMASANEATAAHA NLSALPGGDYTLRLDVHYNDGEAEVFDSASTESFSYSNPNEKSEIADYIVKIDKHEHICT IDWSDFTDWSYQNYKLLVVADGETIYKGEFENDVKDSSIVFSEGTKNLEIQLAYRSDSIW SKYKVKKIDLDKEYLSLKAEQITSSSQISLEYKVEKEREVKVSVNGKEGQYKVKDSGFLS FDLEDMGNEIYAEMGVEDSVFYIVDSSVYSDTIPPSITLFENLDGKTFFTNSVTIMGKMT GGNELSIAGKAVALDSSGNFSYVFSLSPGENVLEILAKDANGNAASRTLTLYRGGGVLNK KTDVKSWKSFFPAILGAVCSLFVIILSAFFMKRRGKGEKKRGGLLLSLVLFDGIFAAGTV LCAWQFVERFRFANSLKYLDLVEKSASKAAEYLIWERIFGLCAIGSLILFLLCLTGTVLF LRKKKTVQ >gi|333758476|gb|AFIH01000001.1| GENE 999 973825 - 974151 358 108 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MENIIFAVILILFLSYAFNKYGFTEEGRTYGVCKEVKVEFTRDNGSPYNEQLRGMDSRMY RPYIEYSWKGEQYLAKAYRAYQRAKIFPGDRVKIRVSKKDKEVVDILS >gi|333758476|gb|AFIH01000001.1| GENE 1000 974473 - 975831 863 452 aa, chain + ## HITS:1 COG:FN1101 KEGG:ns NR:ns ## COG: FN1101 COG1373 # Protein_GI_number: 19704436 # Func_class: R General function prediction only # Function: Predicted ATPase (AAA+ superfamily) # Organism: Fusobacterium nucleatum # 3 448 23 449 470 166 30.0 8e-41 MVLKRKIYAKLLEWKENSQGKKAIMVEGARRIGKSTIVEEFAKKEYESYIIIDFAKKDKN VEEFFNLYLNRLDDLFMMLGTYFSVKLIFGKSAIIFDEVQSFPQARAAIKYLVADGRYDY IETGSLISIKENIQDIVIPSEERSINMYPLDFEEFAWALGEEQLIDYIKNCFGKREALER GMHNKAMHLFKQYILVGGMPKPVSLFVERGKDFTAVDAEKRDILKLYRNDIMKIKAQYRS KVLAIYDQIPGLLSQHEKRVVFKTIQEGSYAEQYSETFFWLSDSMISNECFLCSDPNVGL SLYEDRSYVKCYMGDTGLLLSHAFDENELLEGEIYRQILNDKLSLNEGMLYENVIAQMLV ANGHKLYFYTHYSEEKHRNDIEIDFIISNNSKLKYKMFPIEVKSGKRYTTNSLTRFMEKY KARIGEAYIIHPRNLLIKEDILCIPPYMTICL >gi|333758476|gb|AFIH01000001.1| GENE 1001 975986 - 977692 1265 568 aa, chain - ## HITS:1 COG:BH3073 KEGG:ns NR:ns ## COG: BH3073 COG1080 # Protein_GI_number: 15615635 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) # Organism: Bacillus halodurans # 2 563 5 567 572 479 44.0 1e-135 MVNGIPASRGIGIGSICVIEEHELKYEAIKIEDTEKEQKRFHEAIEQFKKETEEMAEDIR KRIGPKEAEILESHLVMISDPTMADEMSNMIATGQCSESAVEAVCDMFIGMFSKMDDEFM QQRAADVSDIKLSLLKILLGVQDVDIRKLAPGTILVARDLTPSMTSQIHKENVAGILTEM GGKTSHSAILARALEIPAVLSVPNITSLVKDKDTAIVDGTEGIVYINPEGDTLSSYILKR EEYIRKQSELKNFHGKETKTADGVAVELFCNIGTPKDARKAIECDGEGVGLFRSEFLFMD NKRMPTEEEQFAAYKEAAEIMGGKPIIIRTLDIGGDKDIPYLNMKKEENPFLGYRAIRYC LGNKEGYRAQLRAMLRASAFGKIKIMIPLVTCVEEMRSVKELLSEIKADLDAEGIAYDKN IELGCMIETPSASLIADLLAKEADFFSIGTNDLTQYTMTVDRGNADVAYLYSTFHPSVLR SIKRIITCGKEAGIPVGMCGEAAADPLLIPLLISFRLDEFSVNPVLVLNTRCVISKWTKE EADALAEKVLSLSTETEIVTLLKANAKE >gi|333758476|gb|AFIH01000001.1| GENE 1002 977724 - 977987 296 87 aa, chain - ## HITS:1 COG:MYPU_6030 KEGG:ns NR:ns ## COG: MYPU_6030 COG1925 # Protein_GI_number: 15829074 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, HPr-related proteins # Organism: Mycoplasma pulmonis # 1 75 1 75 87 62 38.0 3e-10 MVSRKITVTNEQGLHMRPASIFSQAMTPFSCDVSIFLKDKKYNAKSVMMLMSACIKRGAE IEIRCEGSDEEEAMNKAISLIEGGLED >gi|333758476|gb|AFIH01000001.1| GENE 1003 978050 - 978820 693 256 aa, chain - ## HITS:1 COG:lin2431 KEGG:ns NR:ns ## COG: lin2431 COG1349 # Protein_GI_number: 16801493 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Listeria innocua # 11 235 6 229 250 93 27.0 3e-19 MKNSKANVEARQKNILQYVRKAGEVNSYDLVDEFKISIMTVRRDLEELEQKHLLKRTHGG ACTLDYVKGSKSLSKNIRICRDLISRYASSLIKDNDRIFINGSRTALKMLEYVGNKNVTV YTNNGLAFGRKFPENVSIHMTGGELRNHILVGDATMRNILDVTANKTFIGCWAVYDDGAF LYNIPNEIGINEAMISRTTEDLYILADHSKLQRHDNLESSYGSCIYDRKVTLITDNQADA EIIEKLRASGIEIIIV >gi|333758476|gb|AFIH01000001.1| GENE 1004 978909 - 979214 367 101 aa, chain - ## HITS:1 COG:no KEGG:LSEI_2736 NR:ns ## KEGG: LSEI_2736 # Name: not_defined # Def: phosphotransferase system, galactitol-specific IIB component # Organism: L.casei # Pathway: Ascorbate and aldarate metabolism [PATH:lca00053]; Phosphotransferase system (PTS) [PATH:lca02060] # 8 92 2 87 97 79 48.0 5e-14 MAKLDGKKILACCANGAGSSLMMELAIQKVTKRHNIKPAELTHCPISEGQSAAKNYDVVF CSKAFAANFENLGGNTVVIPLKNVMSDKEIEEGLQTAGLLD >gi|333758476|gb|AFIH01000001.1| GENE 1005 979218 - 980705 1389 495 aa, chain - ## HITS:1 COG:SP2038 KEGG:ns NR:ns ## COG: SP2038 COG3037 # Protein_GI_number: 15901859 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 1 468 1 467 485 371 46.0 1e-102 MGILNAIWTFFATYILQKPPYMVGFLTLLGYCLMGKKWYDTLAGTLKAIIGMLILSAGSG GLVTNFRPILAGLKDRFNLTAAVIDPYYGQNAVTAGVEEVFGKGFSQVMTLLLIAFIVNI LLVRFNKITKCRTLFTTGHVQVQQAATAYWLILFALPALRDNNFALLIVMSVILGAYWAV GSNLTVKPMQELTEGAGFAIAHQQMFGIRLASWASEKLFGSKNGQKEVKKVGDLKMPGFF SIFSQNMVCTAILMTVFFGAIMTVIGKPFFVKAEAIKEKDNFAFYVFNTSLQFAVYLAIL QLGVRTFVTELTASFQGIADKLLPSSVPGVDCAVCYGFGDANAVTFGFLAGLTGQIIAIV ALILMGSPTIIICGFVPVFFDNATIGLVANEKGGLKACLVIPFISGLIQVFGAAFISGWV GLANYGGYLGMFDWDTVWPMFTVVMHYLGYIGVGIVVIVLLAIPQIEYRMDPKGYFLITE DYDAYLEHKKAKKGA >gi|333758476|gb|AFIH01000001.1| GENE 1006 980728 - 981210 524 160 aa, chain - ## HITS:1 COG:SPy0176 KEGG:ns NR:ns ## COG: SPy0176 COG1762 # Protein_GI_number: 15674381 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Streptococcus pyogenes M1 GAS # 23 158 21 151 161 86 37.0 2e-17 MSNVLERIVAKKHYSFINGKDVSWQEAVRLSALPLVEDGSVDSDYYKQIVACIEKHGPYI VMEHNIAMPHTTENPIGAHRTAVGLMICENKIDFGQDTDGEKKEANLLFTLSAVNTDEHM ENIAQLMDVFMNYDLIEALGKCHSAEEILEAMKKYQTSEN >gi|333758476|gb|AFIH01000001.1| GENE 1007 981227 - 982330 857 367 aa, chain - ## HITS:1 COG:PM0763 KEGG:ns NR:ns ## COG: PM0763 COG2220 # Protein_GI_number: 15602628 # Func_class: R General function prediction only # Function: Predicted Zn-dependent hydrolases of the beta-lactamase fold # Organism: Pasteurella multocida # 1 367 1 363 363 491 61.0 1e-138 MAKIADTTRESWIKSTFPEWGTWLVEDIESEVVPDGQVAMWWLGCTGVWFKTPGGANITI DLWCGNGKRTHGDNQMKPGHQMANMCGGRLMQPNLRNVPFVIDPFAFKQVDAVLATHYHQ DHMSIEWAAHVINSGMTTTDENGKEIPVPFIGPLKSVETWKKWGVPEERCRIVKPGDVIK LKDIEIVCLDSFDRTCLVTTDSTGEDREELTGVCPTDMDEKAVNYLVKTPGGNIYHSGDS HFSIYFAKHGKDHDIDVAFGSFGENPIGMQDKMTSVDVLRMAENLQCKVVIPIHWDVWTN FQADCEEIKLLYDFKKDRNEYKFHPFFWQVGGKYVYPQDKDKIYYHHRRGFEDCFEHPQN IPFRSCL >gi|333758476|gb|AFIH01000001.1| GENE 1008 982752 - 982862 70 36 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFVFMIAYKGISSFYMSEQDEKKEKVKYESICYRAL >gi|333758476|gb|AFIH01000001.1| GENE 1009 982834 - 983676 706 280 aa, chain + ## HITS:1 COG:sgbU KEGG:ns NR:ns ## COG: sgbU COG3623 # Protein_GI_number: 16131453 # Func_class: G Carbohydrate transport and metabolism # Function: Putative L-xylulose-5-phosphate 3-epimerase # Organism: Escherichia coli K12 # 1 254 12 268 297 240 45.0 3e-63 MNQYAIGLYEKAIPKTMSWSEKLLCAKDCNYDFLEISIDETEEKLSRLNWTKEQRREILD LMRNLDLPIRSMCLSAHRKYPFGASEKAVRDRGLEIMEKAIAFADDLGIRIIQLAGYDVY YEEGNEKSRERFIENLEKATKMAATRGILMGFETMETEFMNTTEKAMQYVNLIGSPYLGV YPDSGNLTNASLLYNKSVAEDLETGRGHIVAMHLKETLPGVFREVPFLTGHVDFEGVIRK ARDLGVRRFVTEMWDVGKDSWKEDILFANKTMRAILDKQN >gi|333758476|gb|AFIH01000001.1| GENE 1010 983717 - 984778 838 353 aa, chain + ## HITS:1 COG:no KEGG:Apar_0328 NR:ns ## KEGG: Apar_0328 # Name: not_defined # Def: FG-GAP repeat-containing protein # Organism: A.parvulum # Pathway: not_defined # 1 352 1 349 351 248 40.0 2e-64 MKFTKKSIGKLNKCYSLAELEYKGEHCFLVAAEKQDPCYLFNEEGEKMDTVWEGPGGVMT MAQVPGTDGVFLATRKFYSPNDSLEAEIVVVKPKAEGGWETYTLCRAPFVHRFGILRRAG SYYLLVCCLKSGHEYKDDWRQKGACYGAYLPLDLEQFRGEKKLELKLIKDGMLRNHGFSK IQRGGYEAGLVGCEEGSFIFDPPAVYGADWTVTQIHSLPSSDSVLMDFDGDGKLELGCIA PFHGNSLTIYHLDEYGHYVPQWKYSAKESDTEMIHATWACEINGKPSWIVGWRKGTKDTI LISWDTEEGNYKTEFIDRNTGCANAMHFKNKDGKEIIIGANREIDEIAMYMVE >gi|333758476|gb|AFIH01000001.1| GENE 1011 985517 - 985783 220 88 aa, chain + ## HITS:1 COG:no KEGG:SPN23F_18640 NR:ns ## KEGG: SPN23F_18640 # Name: not_defined # Def: putative restriction enzyme # Organism: S.pneumoniae_ATCC700669 # Pathway: not_defined # 3 87 277 363 496 102 64.0 6e-21 MIYKGWSEKDLDTKFEEKGEWKNNILIRKILGLTGDVEKTKEFQKANMNIRVTRVKSNYI PKEDSPFKTYNFMELVVNDVWGDSHPYR >gi|333758476|gb|AFIH01000001.1| GENE 1012 986206 - 986541 126 111 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0421_21064 NR:ns ## KEGG: HMPREF0421_21064 # Name: not_defined # Def: hypothetical protein # Organism: G.vaginalis_ATCC14019 # Pathway: not_defined # 1 111 9 124 509 92 42.0 5e-18 MKSYMDCLNEITSDELFEGLLAHGLFAEKLPPIFTSKVFYEYCSNTSALFINLKKDNNGY IYFESIRNTNVPRSYGIPNPMKYYFLCLELQKTGMKLGMYLSRIQKKILIR >gi|333758476|gb|AFIH01000001.1| GENE 1013 986463 - 987146 249 227 aa, chain + ## HITS:1 COG:sll1503 KEGG:ns NR:ns ## COG: sll1503 COG3344 # Protein_GI_number: 16329609 # Func_class: L Replication, recombination and repair # Function: Retron-type reverse transcriptase # Organism: Synechocystis # 99 226 158 291 508 72 33.0 5e-13 MLRTTKNWDEIRNVFEQNTKEDTYKISRIHIRKRLDEKALFNMRYEEGTMDEMESEEEWI QFDAVPREVECENLEKALFFMNYKNWKTDGDPLMDFSVGKKYVVKADISQCFPSIYTHAI AWALVGKDKAKTNKSKIDWYNSIDSCCQKMRNGETHGLMIGPHASNLISEILLTSVDKNL RCKGYDYVRHIDDYTCYTESQIKAEYFLRDLNLELRKFDFAINHKKQ >gi|333758476|gb|AFIH01000001.1| GENE 1014 987419 - 987823 218 134 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0421_21064 NR:ns ## KEGG: HMPREF0421_21064 # Name: not_defined # Def: hypothetical protein # Organism: G.vaginalis_ATCC14019 # Pathway: not_defined # 1 132 377 508 509 86 33.0 3e-16 MDKYVFERFKVSKKEIENFSNILYKDSVQESNFEGVSYSIYFALKYDFTLLINFDEVIHS TNCICKLCLLLYCKRKKLKEEMKQLKEEAMRLRDDSMDENWLFIYETLSKGNLKGEWKRL KEADVSFVKKEFLI >gi|333758476|gb|AFIH01000001.1| GENE 1015 988185 - 989081 831 298 aa, chain + ## HITS:1 COG:CAC3380 KEGG:ns NR:ns ## COG: CAC3380 COG0491 # Protein_GI_number: 15896622 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Clostridium acetobutylicum # 43 185 17 155 216 64 31.0 2e-10 MSKKDSAFQKVFMSFMFRGKEIFKPLNTGWIDERVGAVREWVANVFFYRKNGTTIMIDAG YNYERLAEKMAWLDIRPTEIQNILLTHLDTDHIGAVEEDSEGLFREARLYIGEEENKYLT GELRRRVLHRLCTLPVVKLDNPKSLLYDGEIFYIKDIKVEAILVPGHSYGHLVYLIDDAY LFTGDTIWFGADGGYSFLNSLAEDNELAKRSLRELEQLLLKRGIAPIIVSGHTGWTDDME FAFRHKDKLCISGKKQKPHDPTAPYDGYDEREDTEEQARKKRLPKAWDCLKHTEAEGE >gi|333758476|gb|AFIH01000001.1| GENE 1016 989100 - 990302 747 400 aa, chain + ## HITS:1 COG:no KEGG:SOR_1171 NR:ns ## KEGG: SOR_1171 # Name: not_defined # Def: hypothetical protein # Organism: S.oralis # Pathway: not_defined # 63 391 56 355 382 80 24.0 1e-13 MHGTEWRNDSMVVVFEFLSEEPIENLITCMNFKVDKLVLFGNYDRVASQKEKTECFLKRY CGVKDVLFRVLSEKDLQSVLSVMRQEIEAALKQNAELYFDITGGESLMLVAFGMLSKEYK TPIHLYDVSKCKLIELNEGADKNLSKDVEQQKIELNLEAVIEMHGGKINDSLHKETKTVA NADAEKDILGIWEVMKRYSASWNLFSQFMRDHMQADENGEVIRKEATVLQALKASPSNFS SVSLLNQILDALGEAGVLLDVVHAAGMYRFSFKNRAIKSYLWDGGSVLELYTYLRERKSA TECQVGVYLDWDGVLHGPGGGDVFNEIDVLALHGYIPTFISCKSGNMSPQQILHSFYELD TVANRFGGKYAKRLLVLTMELTKVYQDRAKEMRIELRFEK >gi|333758476|gb|AFIH01000001.1| GENE 1017 990587 - 991024 142 145 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227871964|ref|ZP_03990352.1| ## NR: gi|227871964|ref|ZP_03990352.1| conserved hypothetical protein [Oribacterium sinus F0268] conserved hypothetical protein [Oribacterium sinus F0268] # 1 140 1 140 628 189 66.0 7e-47 MTENRNYYKKKIILFLFVITTVFGIISLYQYYRVKIENPFQLLSAVLYGTIKLFLFAAPL SAEVNGGMMYEFAKWMAPILTSAFIFTQISNILLHSKNMILNRFSRNHVVLFGSGKMTET LIGNLKKEKNIIRFLLLRRNSWMNA >gi|333758476|gb|AFIH01000001.1| GENE 1018 991147 - 992586 1208 479 aa, chain + ## HITS:1 COG:no KEGG:FN0723 NR:ns ## KEGG: FN0723 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 109 472 283 615 618 98 25.0 6e-19 MAESDLENFSLYAGVIQRIKPKRAITAYVHSESGTVAGYMEELLSEERKKEAGLMKFDTV HFNERDLTIRMLLQERLVQDSLLKSLSGVSELSSSGENKERKSEEKLLRDRKLSAEKIDK TIHAPHILLFGVNELSFPLLKQLANDATLSLKKKTKVTVLDENAGRGIAELFSIYGDAST KENPEETVGEKTEKSSIRKSPSSGLEMALEIESIELGDDSREALQKQRLENYLKAIGKDD APTLIFLMDKDIIKSLKALNLINRYFENVPKLIRNVSQVDLTGLLPTKGGPIRSFGDISE ILTEKVLIREALDMRAKAFNEAYNSLSGMGEGASWNELSFVKKNSSRLSATHAIVKEAFL RRIFSEKSEAEIRALCREKLSEFSKLQEVQKENPEEFHKRFCSFLEENPVLDFLSRLEHK RWCNSYYAMGFRYGEKKDENRRTHPCLIEDWGEVIGEKFALCHPEYDLLSVFCLFREES >gi|333758476|gb|AFIH01000001.1| GENE 1019 992589 - 995639 2311 1016 aa, chain + ## HITS:1 COG:no KEGG:FN0722 NR:ns ## KEGG: FN0722 # Name: not_defined # Def: WD repeat-containing protein # Organism: F.nucleatum # Pathway: not_defined # 17 1012 4 1015 1018 268 27.0 1e-69 MENGMRKSGDNGMENGMENGKDKQYKYDAFISYRHVEPDQTIAKEIHRMIEGFKPPKEFY KSGKKTSFRVFRDREELAARDLSSSIEEALKESHFLIVLCSKRTPLSEWCEKEIRTFRAL HGDSRIIPVLLEGDPDESFPMPLKQLKRGEDESLLDVLAADIRPEEVLKKDFPGYEAVQK TDKGKLTDLTKQAVKLLKVEKYRIMAAILGCNFGDLKQRDKERKNRLILTISSMLGALFL IFGLFMTAAYQKAEQARQEAVQSNASILLKTAKDIAKEGDYLKAVLVAKEAMQSIGKKMP SYLKLRGEEFSIFHDAIYHSGASTLTSISTKNKLTYMSLSYNKKYLAYGLDNDATAISSV ENGEVIRILSGHTQQVKLPLFSHNDKMLATSSFDSTCIVYDVETGESLAKLEIPGIPMLT KFSDDDSALFCIAFRDNLADFYVFDTASWEEKSKFTITEPIRHADIKGDGTEALVVLNAN VEGQLTRRSMQDGSIIDVLPKEKAVDINGQEYELSYRQASYSGDKENILLLTDSSIKKLS LLDYTELFKQSIKVDSNDLKPLVEGTNGETIALQSYSKIYLLDGKSGEISDEIYFSELGT KYFAYHSETNTVVGFGADGHYSIWRNKVIVEDKLNYGGALPSELKFLQNGSKILANSHDG QTIKIIDMKSRISEEPIYARILSYSNDFSKMLLYDGSELSFSSDNGKSSEIINLGDNLNL GLTKDGSVYQISNDGRYFTSVWQKLGSPKPFLLLYDLETQEKQELELNSISPLLRFSDDG KALYILDAKEGLKVYSTADLTEMESYPELQDSATSFLLSEDGELLVLNRFSGTASLYSLA NRKELGNIPGQVLYIKKNGEEILLKGIQNNTAFTWSNQTDTKTVAMDDACAQTPLSFDDI NLYNEKSGLLLMIRNNEIERKAYVVDFESGQLKMSFTPSVKAYDVNGYISPDGTVLAIDQ NYYAKIYGDDSIAHDYMSSAVYHILSEEEVEAEIEKILAGRVLTEEEKEQIGITAK >gi|333758476|gb|AFIH01000001.1| GENE 1020 995652 - 996281 536 209 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKLIYKALNIPLRILLHLTHPDMQCFLGILIPQVICIRLLLANHVRIYLFPLFMLLTFVL TYLSFGKFVEYDVKHDNILVERVYAFFLKLYIENKNRYCFTQIPELYVNEKIEEYNEKFQ KTMQDRKNKAKKEESRIPSFFDLEYEKELKFFGLYNRDFDLQDLKREKRNLVKLHHPDQF TELGEQNEHRVLYDLTIRYYNTIVKNKKL >gi|333758476|gb|AFIH01000001.1| GENE 1021 996442 - 997275 447 277 aa, chain - ## HITS:1 COG:BH1803_2 KEGG:ns NR:ns ## COG: BH1803_2 COG2340 # Protein_GI_number: 15614366 # Func_class: S Function unknown # Function: Uncharacterized protein with SCP/PR1 domains # Organism: Bacillus halodurans # 162 273 9 129 132 58 32.0 1e-08 MIIPFPLQFCDISLFDLLGIYSLKYDAIKEKKNETDDCKKQNDSVRENNKTKKFDKIWKT LLLAASLSLLSAMPVFARGWCRGLSKNAWWYDLGNGNYYKSTWQWLDGNSDGIAECYRFD YNGWMAENTVTSDGYTVNQNGAWTVNNVVQTRGVSSENGIIKKELLGRINQYRIASGLKP LSESAGLSSIADTRARECSVLFSHTRPQGGSVLTEADVCGEILASNQDTPLKAFQAWQKS PGHNRLMLRDDFVRFGAGYYVDSRGNDYWVVLFSFYN >gi|333758476|gb|AFIH01000001.1| GENE 1022 997538 - 997723 138 61 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNISIGINKRKVMCLTYGFLPENSNFHKQADYPFTNSALCDSKDFFISQNLSKIKEVVAY F >gi|333758476|gb|AFIH01000001.1| GENE 1023 997871 - 997966 57 31 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MEVIESRKKRKGIEKEFFKMIDSLKILSFLL >gi|333758476|gb|AFIH01000001.1| GENE 1024 998020 - 998871 810 283 aa, chain + ## HITS:1 COG:PM1714 KEGG:ns NR:ns ## COG: PM1714 COG1737 # Protein_GI_number: 15603579 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Pasteurella multocida # 6 282 8 285 288 154 34.0 1e-37 MQEDFLTRIRSSYNQFTKAEKRVADFILQNPNRVLFMSISDLAETCMVGDTSVFRFCKTM NLKGYQEFKMTLSLSMRGNKKMEEGNTGEITLGDKITDLADKVLQDTISSIRESYSLLDF SQVSLAMEALSGAKRILFFGVGASMLTAMKAMNKFHRIEPKVYCSEMVSQQLMSAATMEE GDVAVIFSYSGATRDIVEIAKLAKESKATVIAITRFQKSALTEYTDIVLLCGANVGSLQR GSTSAEISQLFLVDIMYTEYYRRHFETCSRVLEKTTRAISDRN >gi|333758476|gb|AFIH01000001.1| GENE 1025 998984 - 1000960 1729 658 aa, chain - ## HITS:1 COG:CAC0502 KEGG:ns NR:ns ## COG: CAC0502 COG0556 # Protein_GI_number: 15893793 # Func_class: L Replication, recombination and repair # Function: Helicase subunit of the DNA excision repair complex # Organism: Clostridium acetobutylicum # 3 658 4 660 666 811 63.0 0 MDFKLHADYAPTGDQPQAIAKLVKGLQEGNQFETLLGVTGSGKTFTMANVIEQIQKPTLI ISHNKTLAAQLYSEMKEFFPENAVEYFVSYYDYYQPEAYVPSTDTYIEKDSDINDEIDKL RNSAMAALSERKDVIVVASVSCIYGLGAPTEYLNMALSLRPGQTRDRDDLLRNLIEIQYT RNDMDFRRGCFRVKGDTVDIFPASEGEQAVRVIFFGDEIEEIQLIDVLTGKAQRKLEHTM IFPASPYVIPMDKLRLACKNILAELDERVKYFKEEDKLLEAQRISERTNFDVEMIRETGV CSGIENYTRHLNFAAPGEPPYTLIDYFPDDFLIIVDESHISLPQIRGMYNGNLSRKTTLV DFGFRLPSALDNRPLNFSEFEGKINQMLFVSATPGEYEKEHELLRAEQIIRPTGLLDPEI EVRPTKGQIDDLLSEIHKETEKKHKILVTTLTKKMAEDLTKYLQENQVRVKYLHSDIDTL ERAAIIRDMRLDKFDVLVGINLLREGLDIPEITLVAILDADKEGFLRSETSLIQTVGRAA RNAEGHVIMYADTITDSMERTISETNRRRALQMEYNKAHGITPTTIKKAVRDLIAISKVL DDGDKEITKDMESMSRAEIEKMIRELSKKMRACAAELNFEDAAKCRDKIAELRAGLEK >gi|333758476|gb|AFIH01000001.1| GENE 1026 1001092 - 1002186 1124 364 aa, chain + ## HITS:1 COG:BUpL05 KEGG:ns NR:ns ## COG: BUpL05 COG0473 # Protein_GI_number: 10957108 # Func_class: C Energy production and conversion; E Amino acid transport and metabolism # Function: Isocitrate/isopropylmalate dehydrogenase # Organism: Buchnera sp. APS # 3 364 5 359 363 362 51.0 1e-100 MEYKVTVLSGDGIGPEIVGEAKKVLKKVAELEGFSLYFQEELFGGAAIDACGEPLPEKTL RACRESDAVLMGSIGGQVGVSPWYKLPVEKRPEAGLLRLRKELGLFCNLRPAKLYPELRA ASPLKEEIIGEGFDIMMIRELTGGLYFGEKSLRVENGEEVARDELIYRAHEIERIAKIAF SLAKERGADLVSVDKANVLESSRLWRKIFTEEGEKEKEVVLSHALVDSMAMQLVRNPGKF SVIATENMFGDILSDEMAEITGSLGMLPSASLGEKDFGLYEPSGGSAPDIAGQNMANPLA TVLSAAMLLRFSLHEKGAADRVEKAVEKVLQKGFRTKDIFPKQKEEDIVLLSCSEMGDEL VKVL >gi|333758476|gb|AFIH01000001.1| GENE 1027 1002274 - 1004328 1209 684 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 [Rickettsia canadensis str. McKiel] # 15 676 2 633 636 470 42 1e-130 MDNKDFKDGDHGGFSNMGQTILIILIAATVTFFIYTLAQRFTGKGLNQELSYSGFLSMVD RNLVEKVEWGDGQIVVYPKSSAPSAGSAGTSGDSSAKKDAEDSILGLGKTQGPLFFVVPV NADAEKLVERLYLHNVTIIRKRPDNSAFILQIVLSVVLPFVLLFWFMNGMAKRVGGSGGV MGVGKSNAKMYMQKETGISFKDVAGEDEAKESLVEIVDFLHNPAKYTAIGAKLPKGALLV GPPGTGKTLLAKAVAGEAHVPFYSLSGSDFVEMFVGVGASRVRDLFKQANQSAPCIIFID EIDAIGKSRDNRYGGNDEREQTLNQLLSEMDGFDAAKGIMVMGATNRPEILDPALLRPGR FDRRIIVEKPDLKGRVNILKVHAKDVKLDHTVDFDEIALATSGAVGADLANMMNEAAITA VKHGREKVSQKDLFEAVEVVLVGKEKKDRILSKEERRIVSYHEVGHALVAAIQKHSEPVQ KITIVPRTMGALGYVMQVPEEEKYLNTEAELHSMIVECLAGRAAEELVFETVTTGASNDI EKATKIARAMVTQYGMSKKFGLMGLARQENMYLGGRAVLECGDDTATEVDAEVSRILKEC YEEAKKILEENRFAMDEIAKFLIEKETITGKEFMKILSEVKEKQSASEVNATIGAEAKVE SDSESCAEAKTESASETKAEEMTV >gi|333758476|gb|AFIH01000001.1| GENE 1028 1004432 - 1004629 175 65 aa, chain - ## HITS:1 COG:no KEGG:Closa_2512 NR:ns ## KEGG: Closa_2512 # Name: not_defined # Def: XRE family transcriptional regulator # Organism: C.saccharolyticum # Pathway: not_defined # 1 63 1 63 92 64 47.0 1e-09 MISYAPFWKLMKKEKMSQYRLIREGKLSAGVLNRLRNNQPVSTESIRQICLIFSCNVSDI MEFLL >gi|333758476|gb|AFIH01000001.1| GENE 1029 1004721 - 1005623 507 300 aa, chain + ## HITS:1 COG:CAC2775 KEGG:ns NR:ns ## COG: CAC2775 COG1408 # Protein_GI_number: 15896030 # Func_class: R General function prediction only # Function: Predicted phosphohydrolases # Organism: Clostridium acetobutylicum # 19 295 19 284 287 107 29.0 3e-23 MLILLTFSVIGIGSLIYSYWERNQLKVENYRIVSAKIKKKCRFIFLTDLHEKEFGKENCI LLEKIRKAEPDFILIGGDFPISHSAEETDERDEAEVGAKLLSTLAREYPVYYSMGNHEVK LFSKKEKKGQKTLFQQAFTGVEVVDGKAVFPEKGILVAGFPLDISYYKPLFFKKKKDLED KIRASWENALSSAIREDPRETKGEECFTIAMLHSPFYIEEALSLPVDLLLSGHFHGGAVG IPFFAFMTPQFRFFVPKPRGLFQKGEQRYFISRGLGTHTINIRINNFPELSCFDLCPKEE >gi|333758476|gb|AFIH01000001.1| GENE 1030 1005753 - 1006568 810 271 aa, chain + ## HITS:1 COG:CAC2061 KEGG:ns NR:ns ## COG: CAC2061 COG1354 # Protein_GI_number: 15895331 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 9 249 3 243 249 133 38.0 4e-31 MFGEREKIISYKLDAFEGPLDLLLHLIEKNKIDIYDIPIAQITEQYLEYVNRLEEDDLEI ISDFLIMAVTLLEIKAKMLLPAKEEEEEEGDVREELVQRLLEYKKYKEMGKLLHKKEEAA PMSVQKEPSIPEEVERYSPPLDIDYLLKGIDLLRLRETMREIVRRKEDRKDTLRSNFGKI KREKISLQGKIKDVLAYAKAHGRFSFRQMLHNAKGKTETVVSFLAILELMKMGKISLTQE KAFSDLHIEVKEGISEEDPENLDITGIEEFD >gi|333758476|gb|AFIH01000001.1| GENE 1031 1006580 - 1007407 906 275 aa, chain + ## HITS:1 COG:CAC2060 KEGG:ns NR:ns ## COG: CAC2060 COG1386 # Protein_GI_number: 15895330 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing the HTH domain # Organism: Clostridium acetobutylicum # 19 208 10 200 202 112 38.0 6e-25 MGEYEQISLVPDLGGEIEEEDRIRKREEENLVESLLFSLGRSVSVEEIATCLNMGKDGAF LAAERLRERYEERQEGLLIKKLEDRYQMVSHPKTYEGLIRVVKRPQKPVLSDVALETLSI IAYCQPITKVEVERIRGVKSDHAVNRLVEFGLIEEVGRLEAPGRPMLFATTEEFLYRFGV NSLKDLPALPEEVEKLLKEEVTEELKDGFGLEPDEAEATDENTVGEETEETVGEETEEAA REEIEEEQREVLEEDLRNSTEEEAEEEANAESPET >gi|333758476|gb|AFIH01000001.1| GENE 1032 1007631 - 1008068 437 145 aa, chain + ## HITS:1 COG:BS_yncF KEGG:ns NR:ns ## COG: BS_yncF COG0756 # Protein_GI_number: 16078829 # Func_class: F Nucleotide transport and metabolism # Function: dUTPase # Organism: Bacillus subtilis # 1 143 1 142 144 164 55.0 5e-41 MEEKIKIKYHVKELEKLCYIDGKSDWIDLRVAEEVKMKAGEFRLISMGISVELPKGYEMW VLPRSSAFKNFGILQTNAMGVIDESFCGDNDIIHMPILAMRDTEIHVNDRIGQFRIMPHQ PEVHFVEVEHLNNMNRGGFGTTGKA >gi|333758476|gb|AFIH01000001.1| GENE 1033 1008115 - 1008795 916 226 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227874325|ref|ZP_03992510.1| ## NR: gi|227874325|ref|ZP_03992510.1| hypothetical protein HMPREF6123_2449 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_2449 [Oribacterium sinus F0268] # 19 201 28 210 229 164 55.0 6e-39 MKKRKLAGIILLTLISLSACKNEAKAYRTEGITALEKGDAEKALENFDLALEKSKGKVGT LQFDILAYKVEAEIHLGKLGEAEENLQNLETISTKNYAKLQDLIEAKKSIVSAGEALNQD DLDLARKELDEAKEKGLSTDRELEYSEAIYLEKTGEWQNAYDAFSKYCSRYPDDAEAARE LQFLESRVKVLGGNTLLSERAKKVGKRHPKYVRRKYRLKEESPKRH >gi|333758476|gb|AFIH01000001.1| GENE 1034 1008813 - 1010180 1550 455 aa, chain + ## HITS:1 COG:ML2336 KEGG:ns NR:ns ## COG: ML2336 COG1167 # Protein_GI_number: 15828259 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Mycobacterium leprae # 19 446 37 462 463 388 43.0 1e-107 MKKNAEKKVNAVNAEEAGMTRYQDLSVEELESLRKELKQSYREYQNMDLNLDMSRGKPSL DQLDLSNGMMDALNSEADMYSSDGFDVRNYGVLGGIAEAKELLSDMMENNPDNIIIFGNS SLNVMYDSISRSYTHGVMGNTPWCKLDKIKWLCPVPGYDRHFAITEYFGIEMINVPMTEK GPDMDIVEKLVSSDESIKGIWCVPKYSNPQGYSYSDETVRRFARLKPAAKDFRIYWDNAY GMHHLYDHDQDYLIEILAECKRAGNPDLVYKFASTSKISFPGSGIASMASSLNNLEDIKK QMQYQTIGHDKVNQLRHVRFFEDIHGMVKHMMKHANIIRPKFEMIETVFEKNLDGLDIGS WTKPKGGYFISFETLPGCAKAVVDKCKKAGVKLTPAGATFPYHKDPEDSNIRIAPTYPPL EDLRIATELFCLVVKLVSVEKLLKEKTEGFSFCTV >gi|333758476|gb|AFIH01000001.1| GENE 1035 1010284 - 1010808 414 174 aa, chain - ## HITS:1 COG:no KEGG:Closa_2357 NR:ns ## KEGG: Closa_2357 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 171 1 171 174 159 46.0 6e-38 MTTEALTQYKLMILYLLQSVNYPLTNSQLSGFFLDNEYTTYFTLQECISDLVEAALIVSH QSQSTTRYEITEEGKQTLQFFEEEISTIAKEDMNQFLLKNKFRLQNEAAVHTDYSQTENE EYLVQVELRESKNLLCQIKLSVPSEENAKAVCKAWKAKSGKLYAYLLSALLEEK >gi|333758476|gb|AFIH01000001.1| GENE 1036 1010966 - 1013593 1982 875 aa, chain + ## HITS:1 COG:no KEGG:Closa_2355 NR:ns ## KEGG: Closa_2355 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 211 828 524 1134 1190 263 30.0 3e-68 MREKINKLARGIVDQERPSTHFSEERIEGKISLLESKTFEIFIQSLNAVPMRGLVYCEAP YISLHKNAFGGVRTKVSFTVNTEGMEEESELRGELSFVYLGGEKQIPYHFILEKSPSAKQ LKEIRHFEDLQKLMEADKKAATRIFDYRDFLSAPIMQSAKAVKLYELLKPCGNRALALEE FLAYFSYRPKNGINRKGLLSSSKRKEEKKLEFPEGLSLEEKISLCIRRGERGEEAFELYK RGVEENIKLTNLYENLLYSMKKGYKEELPRAVYLYFSYEYRVEEGLASALYYNILQNFPE NSEIYLRFARQMQDFAVESMLAGKMDEELALLYQKLILPDMVDEKMAELLPKLLRSYKVV VEDSEMEKLILSHPALKGEEVYSLKEGEAYIPMPYKDMILLFQDGMGNRYTRVNHRKTKV FEGEDLEKRMERFSEYTPVFLLQKALQLEKEGIKTEEELECMERAFDNSAFSNSFRMEIL AQILAYHRQEKQSEFPEESLRFLHHIPTKGMKKKEKEDYLAALLYRKEMDRALMFYKEYP YLHIEKELLPAFSDSAIDRGEEELSLYLSHLAFRAERISDKGLSYLLEEWNGSSKEMYAV LKTAEQRREEKGGIDASRLLNMAERLLAQCLFTEKMREAEEAFHLYRKFSGRESLLIRAF LSNYAASIFLYQKRELPDFTALLYEEVRGESYKERVPLLYLLALSYSFSKRESLTEDERE LLNSIVPILLEKNLVFSYTKSLAKFVPLPGAVLEKTVVEYHGKAEEKPYFSVRAEGEKEF HREELQHSYHGIYTASFLLFPGEKMEYRFTLGKEDKLLYESVLKKEEGMMMEGEDVYTAL CKMSRLLMEEKVEELLPLMEDYEEKELSIARVLKD >gi|333758476|gb|AFIH01000001.1| GENE 1037 1013607 - 1014851 1024 414 aa, chain + ## HITS:1 COG:no KEGG:Closa_2354 NR:ns ## KEGG: Closa_2354 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 3 410 5 407 407 219 31.0 2e-55 MKVIGIALSDEYTDISLYREEYTYRFPTLLSRERKGDRFYIGEEAYKKNLDGGVILVDKL LSLFKKKGSATISETCYDAKELLGIFLENLLLEGERRVQGREIPEEEGKDTLVLSVRDAD VELMSSLNELVKEKFSGQYAVQLISHTESFSHYILRQDKKLYNRQVGMLEFSSQVLHYYE MQVSKGTKKYAISVSEVQPDALSFGILEDPRGRRMTDQVLSGLCDRLTKSKVYSAFFLSG KGFENTELFPEFMKKIVRGRRVCVESFLFSIGALYYGRLLGKGEEEEYLLLCDTRIGADI SIKVTKKERDFPLYLAHAGDSWLKETEDIRLLLENQDYIDFQVQDVSATNRGKQYRMSLT SFPKRERRCTKVSLRTSFHGNAVAGIEITDLGFGDLWKGSFQSIKETIPLKGKE >gi|333758476|gb|AFIH01000001.1| GENE 1038 1014853 - 1015638 685 261 aa, chain + ## HITS:1 COG:no KEGG:Closa_2353 NR:ns ## KEGG: Closa_2353 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 258 1 267 271 80 26.0 9e-14 MALILCGREAEIPYYYERLDLSVYSLEELGYALGHYLILVPDHFVNPELCRWLSEALGEK ELGEKLLQLLEMGEKEERLIFRLIRESSYYTEKEVEELSQEWRRIHALSEAERREKMGDS FFSLGKYKKAVDAYQDALHFEENGRRIRKIGECYIQTKEFQRAAESYRRLYEKNHDKMAA RRLYFLSKMCFPKDKYQSAFQDLEEGLTEVWEKEWQEGLSLARTAPEMHKIEESYREGKE AFLSFAKEKIASWKEEIRGRV >gi|333758476|gb|AFIH01000001.1| GENE 1039 1015656 - 1018358 2219 900 aa, chain + ## HITS:1 COG:CAC2399 KEGG:ns NR:ns ## COG: CAC2399 COG0525 # Protein_GI_number: 15895665 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Valyl-tRNA synthetase # Organism: Clostridium acetobutylicum # 3 899 6 880 881 1026 55.0 0 MKEMAKQYNPEEVEDRIYEKWLQGNYFSAKVNQAKKPFTIMMPPPNVTGQLHMGHALDNA LQDTLIRFKRMQGYEALWQPGTDHAAISTEVKVINMLKEQGIDKHDLGREGFLKEAWKWK EKYEKRIVDQLHKIGSSPDWNRIRFTMDEGCSHAVLQSFIHLYEKGYIYKGAKIINWCPV CQTSISDAEVLHEEKEGSFWHILYPIVGEEGKFVEIATTRPETLLGDMAVAVNPDDERYK DLVGKELQLPLTDRTIPVISDEYVDKEFGTGCVKITPAHDPNDFVVGERHHLKVMNILTD DAKIDLPGSKYHGMDRYEARKAMVSDLEALGLLKKVVPHIHNVGIHDRCETTVEPMVKPQ WFVKMEEMAKPAIEALKSGELQFIPENYGKTYLHWLENIKDWCISRQIWWGHRIPAYYCD ACGEVVVSEKMPETCPHCGGKHFTQDEDTLDTWFSSALWPFETLGWPEDTEDYRYFYPTD VLVTGYDIIFFWVVRMVFSGIEQTGKVPFKKVLIHGLVRDDQGRKMSKSLGNGIDPLEII AEYGADALRMTLLTGNAPGNDMRFYHSRVEASRNFMNKVWNASRFLFMNCNEEECKALSA LSSLENPTLSELLEKVPENLEMADKWILSKLNGVVAEVTRNLESFDLGIALDKTQSFIWE EFCDWYIEMVKPRLYNEGGESKCLALWTLLKVLKTSLSLLHPFCPFITEEIYDTEISLFR EDEKPLIISDFPKYTETLDFSAEEKEIEAIKEAVRAIRNIRTEMNVAPSKKATVYLVSED EALRKTFQHSKVFFATLAFASDVIIQENRDGIPENAVSVLIPKANLFIPFSDLVDIEKER ERLEKEEARLVNEIKRAEGMLKNERFLAKAPKEKVEEEEEKAQKYRDMLEQVKERKSMLS >gi|333758476|gb|AFIH01000001.1| GENE 1040 1018392 - 1018967 425 191 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227874317|ref|ZP_03992502.1| ## NR: gi|227874317|ref|ZP_03992502.1| hypothetical protein HMPREF6123_2441 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_2441 [Oribacterium sinus F0268] # 24 190 39 205 206 181 52.0 3e-44 MKKFVTLILVSFTLLFCFSFAIFAAEREATGEEISAVKSGQSLAYRWEDSENHWKLLYLD TKEKAWKYAKDRWVQIGHRFYFFDANGNAMEGWFQDEGKWYFAEYDNLKRNNDNAGLVLM GWASIPDEKGKNQTYYFTADESGRPSGILQGTAGKYDAFTVDGQQVYFDELGHADVRSVS ASVPKFAGKRT >gi|333758476|gb|AFIH01000001.1| GENE 1041 1018970 - 1019449 421 159 aa, chain + ## HITS:1 COG:BS_yydA KEGG:ns NR:ns ## COG: BS_yydA COG1576 # Protein_GI_number: 16081075 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus subtilis # 1 159 1 159 159 167 55.0 6e-42 MTVRVCSVGKIKEKFYREALSEYGKRLLAYCKLEMIEVADEKTKEGSSPSEDRLVLEKEG RRLLEKIPERSFVIALAIKGKELDSVEFAKKMEKLFLEGKSDLSFVIGGSLGLSEEVYKR ADYLLSFSPMTFPHQLMRVILLEQIYRGFRINSGEPYHK >gi|333758476|gb|AFIH01000001.1| GENE 1042 1019734 - 1020231 469 165 aa, chain + ## HITS:1 COG:no KEGG:Closa_0702 NR:ns ## KEGG: Closa_0702 # Name: not_defined # Def: CarD family transcriptional regulator # Organism: C.saccharolyticum # Pathway: not_defined # 1 161 1 161 170 92 31.0 5e-18 MFQSGTYVVYGCKGVHKILGTTRLDLEGIPKDKDYYVMQAVKKPDGAVYAPVEASRTNMR SVMTREQAESFLHTAEHIHALTCKTPKQREENCREGIKSCAPDALLQVIKTVLERREERA RQGKKLTLSDLHFMEQAEDILYEELAISLSISRVEVEEKIKAYAS >gi|333758476|gb|AFIH01000001.1| GENE 1043 1020373 - 1020777 302 134 aa, chain + ## HITS:1 COG:no KEGG:Closa_0818 NR:ns ## KEGG: Closa_0818 # Name: not_defined # Def: GtrA family protein # Organism: C.saccharolyticum # Pathway: not_defined # 7 133 13 134 141 65 38.0 7e-10 MHKNMDEGIRYILVGVLTTLVNYIFYGGFDFLFEKIGVASVISYKLAYGVAFVAAVLFAF FANKYMVFRKKGGKLFQEILSFFGLRVASGIASFFLLVLLVDVLRLTHTMGWVLSSAINL IVNYIGSKFFIFRS >gi|333758476|gb|AFIH01000001.1| GENE 1044 1020878 - 1022197 553 439 aa, chain + ## HITS:1 COG:L48341 KEGG:ns NR:ns ## COG: L48341 COG4485 # Protein_GI_number: 15672817 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Lactococcus lactis # 4 431 2 431 883 157 28.0 3e-38 MKKKWVRKEDWLAFFLPLLTMLMIFIIKGIFPFGKESFLRTDLYHQYAPFLREFQAKLQS FSSLSYSFNLGLGVNFSSLLSYYLASPLNFFVIFFPKTLFIEYITYLIVLKIALSGMTAS IYFRKHFRRNDYFSTLFGMLYALSGYIAAYSWNVMWLDCIFLFPLILLGLENMLEKERPE LYTVTLALSILSNYYISIMICLFLVFYFLSSLFYYGAEEIKLVGKRLFYFALYSILAALI AAAFLLPAIFALRFTASSGISFPKTITQYFTIIDMAARLFPFVETEQGLKHWPNIYAGAL SLFIVPLYFKNPAIQMKKKCIFSFFVLFFFLSFSINALNFIWHGFHYPNSLPARQSFLFI FLLLTAGAEWYGKRKLSSRKDLSFSLFLTSAFVILCQKMITEEAFHWSVFYLTLLFLFLY FLLFVFEKKDWTVRFSPSC >gi|333758476|gb|AFIH01000001.1| GENE 1045 1022230 - 1023558 1273 442 aa, chain + ## HITS:1 COG:SPy2211 KEGG:ns NR:ns ## COG: SPy2211 COG4485 # Protein_GI_number: 15675943 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pyogenes M1 GAS # 11 360 470 847 858 87 24.0 7e-17 MAVTSVPTTDRNAYLEGRKETEKLVKEVRLEDDGFYRFLREDAKTKDDGALMRYNSASIF SSTAYGAVSDWYTKLGMEASTNAYSINGATPLMKSLLALKYEIVKEEPKNSKGIGLSYVN GEGGYRLYENQYALPLGYFLTKEELSQFDLQAGTPALVQNSITKTLEGEDILEPILGKME SSVYTFTVEKSRDIYVYVNNEKVKEVKAILPDGEKSFDHVDRGYLLSLGYLEEGSTVELK SQTENESMDATAYSFSFDVLSGVSEKLLKRSMEVTKWKDGSVKAHLTAAEDGILFTSIPY DPGWKVKVDGKTVEPEKSMGAFLGIPVREGEHEMEMQFTAEGSRFGLLLSVNGLLLFALF LFLRKRNGFSEGERDRDQYLLRKREVMPGLNPEQTDSLMTESEKEALHVRSRKRGNRIAP YRGKLPNAKGRVHLVEKMDVKE >gi|333758476|gb|AFIH01000001.1| GENE 1046 1023582 - 1024256 637 224 aa, chain + ## HITS:1 COG:Ta1477 KEGG:ns NR:ns ## COG: Ta1477 COG3404 # Protein_GI_number: 16082442 # Func_class: E Amino acid transport and metabolism # Function: Methenyl tetrahydrofolate cyclohydrolase # Organism: Thermoplasma acidophilum # 23 224 15 217 217 100 31.0 2e-21 MNKNRDLTKKESILGERPSPGKETIAEFLEALSSKSPIPSGGGVTALSASLAFSLALMVG NLTLGKKKYAHYEERLKIRMQEWEEGRTVALRLAKEDEEAFMPLAKAYALPKETEEEKEI YRERMEECLDHASYVPLQLLKLCAETAKSLKELAEEGSKLAISDVGIAAGLFLTAMRGSA LNVKINTNLMQNEERKKEREEAVEEALKQCELLEQTVREVEKRI >gi|333758476|gb|AFIH01000001.1| GENE 1047 1024353 - 1025189 829 278 aa, chain + ## HITS:1 COG:BS_folD KEGG:ns NR:ns ## COG: BS_folD COG0190 # Protein_GI_number: 16079487 # Func_class: H Coenzyme transport and metabolism # Function: 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase # Organism: Bacillus subtilis # 21 273 26 277 283 205 43.0 9e-53 MEELRGKEVVEAIQSECLSFVQKEACLPTLAVLRVGEKEADMSYERSIKKRFQDFGLEVK DYHLEENCSNQEFQEVFRFLNEDPEIDGILVFRPLPPQIDEEEMLSVMKKEKDVDGVTSS NLAGLLLQDPDAFAPCTAEAVMELCKYYKIPLSGKEVCIIGRSLVVGKPLSILMLNADAT VTVCHSKTENSKEVAKRADVLVAAIGKAKAIGSSYCKEGATVIDVGINVDADGNLCGDVD YDTMKTVAEKLSPVPGGLGAVTTAVLAKHVVKAYQLLH >gi|333758476|gb|AFIH01000001.1| GENE 1048 1025284 - 1026669 1163 461 aa, chain + ## HITS:1 COG:TM0244 KEGG:ns NR:ns ## COG: TM0244 COG4656 # Protein_GI_number: 15643016 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfC # Organism: Thermotoga maritima # 3 419 17 429 451 319 45.0 8e-87 MGVSTFKGGVHPYDGKELAMDKAIVDLRPEGLMVYPLSQHIGAPAKALVGKGDRVLMGQK IAEAAGFISAPVISSVSGTVKSIEKKLTVGGSMVESIVVENDQEYETIPGFGEKRDYTKL SKEEIVQIVKDAGIVGLGGAGFPTSVKLCPKNPEKIDFFLANAVECEPYLTSDYRDMLET PEKLIGGLKIVLSLFPNAKGKICIEDNKPEAIRILTELTKNEERIEVVSLRTRYPQGGER QLIYAVTGRKINFSILPADAGVLVNNTDTLIAIFEAVCESKPLVRRILTVTGDAVAHPGN FRVPLGTNYQQLIDAAGGFTEDPEKVISGGPMMGMSLFTLDVPVTKNSSSILAFKEDQVS KEAVTPCINCGRCAEACPTNLMPVLMMKAVLQKDIDRFKALYGTECIECGCCAYVCPAKR PLTQGFKEMKRRIKAELARKAEAERKAEAEKKAKAEKKGGE >gi|333758476|gb|AFIH01000001.1| GENE 1049 1026673 - 1027611 854 312 aa, chain + ## HITS:1 COG:TM0245 KEGG:ns NR:ns ## COG: TM0245 COG4658 # Protein_GI_number: 15643017 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfD # Organism: Thermotoga maritima # 1 312 1 318 318 200 40.0 3e-51 MKLLQISSSPHIREDVNSSSIMRDVVIAMLPTAIYGSLQWGFHAFFVVVLTTLAAVLTEL VYQKAMKLPVTINDWSAAVTGMILALNCPPNIPFWIPIVGSVFAIIVVKQLYGGLGANFM NPALAARCFLLISFAGKMTTFTSVGSDAVSTATPLAILKASPTATPDLMNMFLGRIPGTI GEVSKICLLIGALYLIIRRVISPKMPLLYIGTVALFTLLFGKGGASPEYLLSEILGGGLI FGAFFMLTDYVTSPITPMGQVIFAILAGLLTGLFRLYGGSAEGVSYAIILSNIVVPIINN KTIPKAFGREGK >gi|333758476|gb|AFIH01000001.1| GENE 1050 1027613 - 1028221 913 202 aa, chain + ## HITS:1 COG:FN1594 KEGG:ns NR:ns ## COG: FN1594 COG4659 # Protein_GI_number: 19704915 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfG # Organism: Fusobacterium nucleatum # 3 185 2 160 177 65 35.0 5e-11 MKKDSFIKDALVLTAITLISGLLLGAVYAATKDTIAEAIREKTNAAYKVVLDAHDYDADS LKEKLEKATADGKLAADNGNASLSEAILAKDESGNTVGYVLKGQAAGYGGAVVVVVGVSS DLKVTGISFPETLPETAGLGQKATLPEFYEQFKGKGTKLSVKKGGGAGENEIDAISGATI TSTAVTNVVNAATEFVEDYAEK >gi|333758476|gb|AFIH01000001.1| GENE 1051 1028233 - 1029012 882 259 aa, chain + ## HITS:1 COG:TM0247 KEGG:ns NR:ns ## COG: TM0247 COG4660 # Protein_GI_number: 15643019 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfE # Organism: Thermotoga maritima # 5 202 4 199 200 197 51.0 2e-50 MNKYLERIVNGIFKENPTFIIMLGMCPTLATTTSAMNGLGMGLSTLAVLMFSNLVISALR KVIPERMRLPGEIVVVASLVTIVQLLIQAYVPSIYEALGIYIPLIVVNCIILGRAESYAL FNGPLLSFCDGLGMGLGFTFALVIIGSVRELIGSGSIFNFQIIPEAYHISIFVLAPGAFL VLAMLTAIQNKLRLPSATNGDAVQSEFVCSGNCMGCFSDCKTEAAKPIAKTAAAASAAVK PEVAKEELTVDHKEKEETV >gi|333758476|gb|AFIH01000001.1| GENE 1052 1029009 - 1029623 835 204 aa, chain + ## HITS:1 COG:FN1592 KEGG:ns NR:ns ## COG: FN1592 COG4657 # Protein_GI_number: 19704913 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfA # Organism: Fusobacterium nucleatum # 19 203 21 192 194 165 57.0 6e-41 MKDLLLIAIKYSLVSNVVLSQFLGICPFLGVSKKTESSKGMGGAVIFVIVIASVITHGIY VTFLAASGPLCQALGLKDGLEYLNTIVFILVIAALVQFVEMFLKKNIPSLYESLGVYLPL ITTNCAVLGVALNNVSYGYNLAESFVYGLGISVGFALALLLMAGIRENIIAGNDRIPHSF QGSPIVLVTACLMAIAFFGFGGLI >gi|333758476|gb|AFIH01000001.1| GENE 1053 1029642 - 1030511 1035 289 aa, chain + ## HITS:1 COG:MA0664 KEGG:ns NR:ns ## COG: MA0664 COG2878 # Protein_GI_number: 20089551 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfB # Organism: Methanosarcina acetivorans str.C2A # 1 262 1 261 264 158 38.0 9e-39 MTTLILVAAGLVGATGLILGLFLGVASEKFKVEVDEREAEVRAALPGSNCGACGFPGCDG CAKAIAKGQAPVNQCPVGGAPVAEKIAAIMGTGSVSVDNVKKVAHVHCQGDCDKAKQQAH YSGIADCNDLVVVPGGTEKACPYSCCGYGSCVKVCAFDAIHVINGVAIVDKEKCTACGAC VKACPKSLIALVPYKKKHIVSCKNLLKGKQVKDACSIGCIACGICEKNCPFDAIHVLDNL AVMNEKCTDCGICAQKCPTSAITGKRVKKPEVKQEVQAEEKKAEASASV >gi|333758476|gb|AFIH01000001.1| GENE 1054 1030833 - 1031099 267 88 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227874297|ref|ZP_03992484.1| ## NR: gi|227874297|ref|ZP_03992484.1| conserved hypothetical protein [Oribacterium sinus F0268] conserved hypothetical protein [Oribacterium sinus F0268] # 1 87 1 86 86 113 66.0 4e-24 MKEWSKALKNLSILTQLGLSLIMPLLLCLFLVYRLREVFSLGYWIYIPAFFFGLGGSCVT AYKVYLSVCKKEEEEKRSKDKAFNEHKS >gi|333758476|gb|AFIH01000001.1| GENE 1055 1031157 - 1031591 306 144 aa, chain + ## HITS:1 COG:no KEGG:bpr_I0161 NR:ns ## KEGG: bpr_I0161 # Name: not_defined # Def: hypothetical protein # Organism: B.proteoclasticus # Pathway: not_defined # 2 135 3 142 143 121 46.0 9e-27 MRVQETVKKETVQIAVQSSIATIVMWLCIFILHRFLPEKVNFDYRVILSGLLGTAVAVTN FFLMGVTVQGVLSVENQEEAYQRMRLSYRNRTMLQLGWIILAVVAPCFQAVAGIVPLLFP GGILRIRGVLEWKKGKNQKQGGEN >gi|333758476|gb|AFIH01000001.1| GENE 1056 1031595 - 1032356 783 253 aa, chain + ## HITS:1 COG:CAC2871 KEGG:ns NR:ns ## COG: CAC2871 COG0356 # Protein_GI_number: 15896125 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit a # Organism: Clostridium acetobutylicum # 26 246 20 214 221 99 31.0 8e-21 MNFDISGAKIFLKIPTGIPILGDILLSETLVVSWVVMLIITGLCIFLTRNLKVENIGKRQ AIAELIVESANNLVRTNTGGNRFDKMIPFVAALFGTSIVSNLISLTGLRSPTADLSTEAA WAVVVFTMITANKIKAGGFLGYLKGFTTPIFIMTPFNILSEIATPISMACRHFGNILSGI VINGLIYAALALASSALLGLIPGAVGAFLSNIPILSVGLPAILSFYFDWFSGAMQAFIFT MLTIMYIANAAEG >gi|333758476|gb|AFIH01000001.1| GENE 1057 1032497 - 1032778 364 93 aa, chain + ## HITS:1 COG:FN0363 KEGG:ns NR:ns ## COG: FN0363 COG0636 # Protein_GI_number: 19703705 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K # Organism: Fusobacterium nucleatum # 8 85 6 83 89 71 53.0 5e-13 MSDFQFLAKGIALAGCGIGAGAALIAGIGPGIGEGNAVAKALEAIGRQPECKSDVTSTML LGCAIAETTGIYGFVTGLLLIFVAPGMFMNFLA >gi|333758476|gb|AFIH01000001.1| GENE 1058 1032820 - 1033323 637 167 aa, chain + ## HITS:1 COG:SA1909 KEGG:ns NR:ns ## COG: SA1909 COG0711 # Protein_GI_number: 15927681 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit b # Organism: Staphylococcus aureus N315 # 13 161 20 168 173 74 30.0 6e-14 MESQQLVTIIPWTFIAQILNLFIQVYLIKRFLFKPINEVLQKRQKLADQNIQEAKKAKED AEAVKAEYESSMSDARGEASRIIEDAKKDAGIRAEEMIKEAQAEVSSIKAKAEADIRLER KKALNEVKDEIGSLAMDIAGKVVEKEIHEDEHKALIDEFLQNVEEAS >gi|333758476|gb|AFIH01000001.1| GENE 1059 1033320 - 1033859 590 179 aa, chain + ## HITS:1 COG:BH3757 KEGG:ns NR:ns ## COG: BH3757 COG0712 # Protein_GI_number: 15616319 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) # Organism: Bacillus halodurans # 8 174 10 177 183 81 27.0 7e-16 MNQSSALYGKSFYDLAKEEKITKEVLEEMELVKALFQENPDYIRLLLEPSIPKKERLSLL DQAFSEELQPYLLNFLKVLLEKGLLRSYSECYKTYKKRYQEDEGITDALVVSAVALSEEQ KENLVSKLEKLCQKKIILSEKIDPEVLGGLKVEVDGKTLDGTVSGRLKEIRKNVNEVVL >gi|333758476|gb|AFIH01000001.1| GENE 1060 1033876 - 1035396 1596 506 aa, chain + ## HITS:1 COG:BH3756 KEGG:ns NR:ns ## COG: BH3756 COG0056 # Protein_GI_number: 15616318 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, alpha subunit # Organism: Bacillus halodurans # 1 503 1 499 502 638 63.0 0 MELKPEKISEVIRSQIKYYQNAIVQNETGTVLTVGDGIARVSGLTNCMAGELLEFSDGTF GMAQNLEETSVSAVLFGSDVGIKEGQSVKRTGRVVSVPVGDSMIGRVVNAIGQPIDGAGP IESTEFRAVESPAPGIIKRQPVKEPLQTGIKAIDSMIPIGRGQRELIIGDRQTGKTTIAI DTIINQKGKDVICIYVAIGQKRSTVTALVNELKDAGAMDYSIVVAATASEPSPLQYIAPY AGCAMGEYFMNQGKHVLIIYDDLSKHAVAYRAISLLIRRPPGREAYPGDVFYLHSRLLER AAKLSPELGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETELFHSGIMPAVNPG ISVSRVGGNAQIKAMKKVAGTLKLVYSQYRELQSFAQFGSDLDQDTKQRLAQGERIVEVL KQGKGDPVPVEKQVAILYAVVHGILSKVEVKDIKKYEEELYHFLDSDAEAVNAMQAIVST GKLEEDTEKKLNSSLERFTEEFLKRL >gi|333758476|gb|AFIH01000001.1| GENE 1061 1035421 - 1036281 878 286 aa, chain + ## HITS:1 COG:BH3755 KEGG:ns NR:ns ## COG: BH3755 COG0224 # Protein_GI_number: 15616317 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, gamma subunit # Organism: Bacillus halodurans # 3 286 2 284 285 188 37.0 1e-47 MAANMKSVKLRIKSIQNTMQITKAMELVASSKLRRAKEKAENTKPYFQTLKKTLSEIANG NTDFSSPYVKSNTSEKWCYVLIAGDRGMAGGYNANLFRALEEEVKGKDFALFPLGKKALE YGRQKHYSIVNENYSLVGDLNVSDAYAIGKELCKAYREGEFGHIVLLYTDFISMMSQKVG SLSLLPLSALKEESEEEAKAIRNLILYEPSGEDVFNAIVPEYLAGLVFSGVCTSVASELA ARRTAMEAATDNAGEMIDKLSLFYNRARQASITQEITEIVAGAEEL >gi|333758476|gb|AFIH01000001.1| GENE 1062 1036302 - 1037696 1414 464 aa, chain + ## HITS:1 COG:CAC2865 KEGG:ns NR:ns ## COG: CAC2865 COG0055 # Protein_GI_number: 15896119 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, beta subunit # Organism: Clostridium acetobutylicum # 4 463 3 462 466 669 72.0 0 MTEKHVGKVIQVMGAVLDIRFQEGELPALLNAISIQLDGKELICEVAQQLGDDTVRCVAM SSTDGLVRGTEAVDTGSPITVPVGDGCLGRIFNILGEPVDEKPAPETEERWAIHRPAPSF EEQTPATEILETGIKVVDLICPYAKGGKIGLFGGAGVGKTVLIMELIHNVATAHGGISVF TGVGERTREGNDLYGEMKESGVLDKTALVYGQMNEPPGARMRVGLSGLTMAEYFRDVKHQ DVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATDMGALQERITSTKQGSITSVQA VYVPADDLTDPAPATTFTHLDATTVLSRDIASKGIYPAVDPLDSTSRILTPEVVGEEHYQ VARGVQQVLQRYKELQDIIAIMGMDELSEEDKITVYRARKIQNFLSQSFSVAEQFTGLEG KYVPLKETIRGFKMILDGECDELPESAFLLVGTIEEVFEKAKKQ >gi|333758476|gb|AFIH01000001.1| GENE 1063 1037709 - 1038110 454 133 aa, chain + ## HITS:1 COG:BS_atpC KEGG:ns NR:ns ## COG: BS_atpC COG0355 # Protein_GI_number: 16080733 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) # Organism: Bacillus subtilis # 1 133 1 132 132 65 30.0 3e-11 MAMFPLEIVSMDGEKFKGEVERLSLRSITGDLAIMAHHINYCTAVGMGTAKVILPDGTEK KGACIGGMLSMMDNHCRLIPTTFEWSDEIDVERAERAKAKAEKRIEEEKSEEARVRAQAK LYRALIRLQTAEK >gi|333758476|gb|AFIH01000001.1| GENE 1064 1038441 - 1040210 211 589 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 368 575 15 228 245 85 27 7e-15 MNLFMAVLGTSVLSLAILSVPQLFQILIDYLSGSREYSLKGIILLTAGIFLMEFFSAVAT YFFRTKFSTRAVLQYRNFACDYLLKKKVADFYASNSSVYLSALSNDLMKIKEQFLDQIPI ITQIIFCGIGAIIVMLRYNVFLACMSCVLSLIPFFAALYSGKNMGELEERLSTKNAEYLA FLKDFSIGFTIIKSYKVEAIFSKLHGAVNEKTEETMLKRERCVEKVNYFAAISGYVTRLS ILFLSAYIAFTRHSISIGTVIAFSQLIHYLIDPLSSLPSMLTEAKAAYRLTDKFWDTIKR EEVPQNTPENNRVKEEQIAEMQTAIEDKKIVEEQEIRVQKQSPDESIPSLRGEILFNQIC FSYSEGKEVLKELNLRVKEGEKVVLLGTSGSGKSTILKILMSMERAQSGTIRVGGQDTMD LGEDRLFKEISYIQQEVFIFDGTIRENISLFQNYREDELQSVIERAGLRNLVKEKGLDYL CGENGAALSGGERQRISIARSLLRKTPILLADEITASLDKENSYLVLDTLLNIENTTEIL VLHDLDSRILSRVDRICVLKNGKVEEEGSFTELLEKKGYFYALYHVEAE >gi|333758476|gb|AFIH01000001.1| GENE 1065 1040262 - 1040387 144 41 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAFGMELGESLFDISYLAVLLTLNFAFYIPVVLNIFKHEAG >gi|333758476|gb|AFIH01000001.1| GENE 1066 1040393 - 1041685 230 430 aa, chain - ## HITS:1 COG:MT0627 KEGG:ns NR:ns ## COG: MT0627 COG1373 # Protein_GI_number: 15840000 # Func_class: R General function prediction only # Function: Predicted ATPase (AAA+ superfamily) # Organism: Mycobacterium tuberculosis CDC1551 # 21 369 13 360 411 63 26.0 6e-10 MKKKKKTYRDRITDEALQLKLKAFGATLIVGPKGCGKTTTGKHFSKSYIEFQDEDNREKY LSVAENVPSKLLLGERPRLFDEWQDAPKIWGAIRKDIDDTGLKGQYILTGSSSQKVDTPH TGTLRISTLRMFPMSLYESGESSGNVSLLDLFNGKSIEWEESKINIDDLIYAICRGGWPQ SIDVENKEVSLSIASDLFYQTCHSDISTISQTKRNPLWAERLLRSYSRNICTLAETKTIY ADLTSTTEISKPTFYDYFHDLEDLYIIDEIPAWCPAIRSRDAIRAGNKRNLVDPSIAVAA LGLSPDYFNSDFKTLGFLFESLCIRDLKIYSSGLNGEVSYYHDRYGLEADAVLHLKDGRY ALIEFKLGSKEIDMGAKHLCEIEQRISVYNEKEKQVPLRLPDLKLIITATEYAYKRDDGV YVIPIACLKS >gi|333758476|gb|AFIH01000001.1| GENE 1067 1042023 - 1043435 1372 470 aa, chain + ## HITS:1 COG:YPO4054 KEGG:ns NR:ns ## COG: YPO4054 COG1921 # Protein_GI_number: 16124170 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine synthase [seryl-tRNASer selenium transferase] # Organism: Yersinia pestis # 6 456 8 453 462 378 44.0 1e-104 MDKNNLFRRIPKVDILLEEGKVLDLIQDYGLSYVTDKVRETVEEIREEIKLLSPSEENRE DEILRRIDHIEDAIAEHVEQGIELKLRPVLNGTGTILHTNLGRAPLSHKISTELATLLSS YSNLEYNLEEGKRGERYSHMKEMLCKITGAEDAMVVNNNASSVLLILSTLAKGGEVIVSR GELIEIGGKFRIPDVCAQSDAEMVEIGTTNKTHLSDYQEAITENTKAFLKVHTSNYRIMG FTESVEAKDLKALSLEHNIPIIEDLGSGVLLPLEKYGIRHEPMVQEAIESGVDVVCFSGD KLLGGPQAGIIIGKKKYIDAMKKNPLTRALRIDKFTVAALSMTLREYLHMEGIEERIPVL KMLSEPLSSIKERAERLCNLFRDNRLPGDCTVRACTSQVGGGSLPDTYMDSFAVSFHPHK ISVPELEKRLHFTKEPLIGRVMEDDFWIDLRTIREEELERVVESFQEALE >gi|333758476|gb|AFIH01000001.1| GENE 1068 1043432 - 1045357 2031 641 aa, chain + ## HITS:1 COG:PA4807 KEGG:ns NR:ns ## COG: PA4807 COG3276 # Protein_GI_number: 15600001 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Selenocysteine-specific translation elongation factor # Organism: Pseudomonas aeruginosa # 4 638 1 631 641 308 31.0 2e-83 MKHIIIGTAGHIDHGKTTLIRALTGRNTDRLKEEQDRGITIELGFTWFDLEEGLRCGIID VPGHEKFIQQMVSGVVGMDMVLVVVAADEGIMPQTREHLDILKLLGIEKCILVLTKCDTV DPEWISMMEEDIRKELKDTILEDAPVVRVSSVTGEGIETLKKEIEKMVSSLPERDTKGIP RLPIDRVFSLQGFGTIITGTLISGTLHKGDALEIYPEGLHARIRNIQVHEQDSEIAEAGQ RVALNLTGVKKEELHKGSVISAENSMENSTLMDGKVTMLPDTKRSLKNRERLHFLSGTKE VLCRVVLLDKEEIGPGEEGLCEFILEEETVFKRGDRFILRFYSPVETIGGGVVLEPNARK KKRFSDDAIQELLSKDKGSLEDVLETLLREELETLYTIPSLAKRISHSKEEIEPAMENLI REERVFPVLVQKERYFLHKENAYILGTEMEHVLEAFYKKHPYRIGIPKAEMREKLLKNSK QNLFDACMPFISGVRLEGEYLLLTDRTDFKDEAYQRIEKNILSQLSEAGFMLPRVEELDR KKAKEEDFLDILQNLVVEGQLVKVGEDPELLILKKNLDKVEDYLKSYFSENEVLGIATLK DQFGTSRKCAKALIQYFDKVKMTKRVAGEAERVAGPELNHK >gi|333758476|gb|AFIH01000001.1| GENE 1069 1045637 - 1046272 329 211 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227874419|ref|ZP_03992600.1| ## NR: gi|227874419|ref|ZP_03992600.1| hypothetical protein HMPREF6123_2539 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_2539 [Oribacterium sinus F0268] # 9 209 2 202 202 251 60.0 3e-65 MKERTERKRSCLIYGDSLTYGYLPNEKHQDLRLPVEERYTTMLEQAFPELRFSIHAKVGR CIPYLPFEWEDFKEACKGFTKEDFLIVFLGVNDFLSYGRPDIPRVVNRLKEFLEDFSKEG IPFIASHILYICPPVLDFRGDKSYESFSTMDGKLNEALAEFCKEAEISCFNTAELSLEKF PDGVHLTGSAQIQLGKAMAQFIRKENFFSFS >gi|333758476|gb|AFIH01000001.1| GENE 1070 1046367 - 1046480 57 37 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFLNTLPVQLFVNILSKQLVLFNKNILFIGIVYSKFL >gi|333758476|gb|AFIH01000001.1| GENE 1071 1046517 - 1047893 815 458 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 [Haemophilus influenzae 22.4-21] # 4 455 3 438 456 318 39 6e-85 MDALNAIINKGNDFLWGFLLIFLLCGTGIYYTFRLKFIQLRRFGEGFKLVFGHFSLNGEK HDSGEMSPFQAIATAIAAQVGTGNLAGAATAIVSGGPGAIFWMWVSAFFGMATIYGEAVL AQTYKEEKDGQVTGGPVYYIKAAFKGTLGKAMAVAFAVFITLALGFMGNMVQSNSIGAAF KEVFAVMNVKVPSVAIGIFVAAIGAFIFFGGTKRLAAVLEKVVPLMAGVYIVGALVFIVM HISALPGAISSIFIGAFNPQAVVGAAAGITIRQAIRFGVARGLFSNEAGMGSTPHAHARA KAECPDAQGLCAMVSVFIDTFVVLNLTVFVILTSGILGTIDPTTGEAFTGIRLTQQAFVS GFGNFGHFFVAFCLFFFAFSTVLGWHFFGAVNVQYLFGKGAVKLYSAIVVACIIIGTTLK VNLVWDMSDFFNALMVIPNVLALLALFNVVKDTKKRSK >gi|333758476|gb|AFIH01000001.1| GENE 1072 1048600 - 1048998 485 132 aa, chain + ## HITS:1 COG:no KEGG:Amet_3596 NR:ns ## KEGG: Amet_3596 # Name: not_defined # Def: GrdX protein # Organism: A.metalliredigens # Pathway: not_defined # 5 129 4 124 127 101 44.0 1e-20 MKTLVILTNNPLVKENFPKKYPDVKVEIDFREISFMDVLRGVRDMVHSGAKILTHPLDGS IKPNETPYESVLLDKTPEEGFDMKSLDLIEYALNTCEKFEEKDRIHIEEVQKDFQTLDWT LLDSGLESLMLH >gi|333758476|gb|AFIH01000001.1| GENE 1073 1049032 - 1050312 1706 426 aa, chain + ## HITS:1 COG:no KEGG:Shel_25240 NR:ns ## KEGG: Shel_25240 # Name: not_defined # Def: glycine/sarcosine/betaine reductase component B alpha/beta subunit # Organism: S.heliotrinireducens # Pathway: not_defined # 1 426 1 426 426 628 74.0 1e-178 MKLELGKIFIKDIQFADTTEIKDHVLYVSKKELTEVFLTEEKIKEVEFDIAKPGESVRIT PVKDVIEPRVKVEGKGGVFPGVVSSVETVGSGKTYCLKGMAVVTAGPIVGFQEGIIDMTG LGAEYTPFSKTINLTCVCKPVEGTESHAYEQAVRMAGLKTATFIAEKAKELTPDETKVYE TLDLIEGANAYPNLPRVGYVQMLQSQGLLHDTYVYGVDAKKILPTILYPTEGMDGAIISG NCVSACDKNPTYVHENNPVVEDLFEEHGKTINFVAHIITNENVYLADKERSSNQTAKLCK MLHLDAVIITEEGFGNPDTDLIMNCKKIEAEGIKTVIVTDEYAGRDGKSQSLADADVAAN ALVTAGNANQLITLPKLDKLIGTLDYVTKIAGASDTTLKPDGSLEVELQVITGATSEVGF NKLSAR >gi|333758476|gb|AFIH01000001.1| GENE 1074 1050323 - 1051372 1059 349 aa, chain + ## HITS:1 COG:no KEGG:Shel_25230 NR:ns ## KEGG: Shel_25230 # Name: not_defined # Def: glycine reductase, selenoprotein B # Organism: S.heliotrinireducens # Pathway: not_defined # 1 349 1 350 437 489 71.0 1e-137 MGKLRVVQYINQFFAQVGGEDKADYPMEYHEGPMGPGLAFQQAFGDEAEIIGTIVCGDSY FGENTDKVKPEILKKVAELKPDLFIAGPAFNAGRYGFACATIAAAVQDELHIPVITGMYV ENPGADEAKSKIYIVSTKNSAAGMKDAVKKMAPLGLKIARGEKIGSSKEEGYIPQGIRVN FFEEERGSKRAVKMLLAKIAGKEFTTEYPMPSFDRVDPMPAVKDLSKATIALVTSGGIVP KGNPDHIESSNATRYGEYNIAGVNDLTAETYETAHGGYDPSYANQDADRVLPVDVLRDLE KEGKIGKLYDYFYTTVGNGTAVASAKKFSEEIGAKLKAAHVDAVILTST >gi|333758476|gb|AFIH01000001.1| GENE 1075 1051400 - 1051630 211 76 aa, chain + ## HITS:1 COG:no KEGG:CD2351 NR:ns ## KEGG: CD2351 # Name: grdB # Def: glycine reductase complex component B gamma subunit (EC:1.21.4.2) # Organism: C.difficile # Pathway: not_defined # 1 76 359 434 435 118 76.0 9e-26 MVKGIEATGIPVVHVCTVTPISMTVGANRIVPAIAIPHPLGNPSLKPEEEKALRRKIVEK ALHALTVDVDKQTIFK >gi|333758476|gb|AFIH01000001.1| GENE 1076 1052038 - 1052985 561 315 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 4 314 1 306 306 220 40 2e-55 MSKLYDVLILGAGPGGLAAGLYAGRARLSTCIIEKGQDGGQIAITDSIENYPGQIVEGES GPSLIKRMTEQAERFGCDRVHDTIKSVELEGDVKKVVGVNGTYEGKTLIIATGANPRPIG CKGEQEFLGKGVSYCATCDANFFEGLPVFVVGGGDSAVEEAMYLTKFASSVTLIHRRHEL RAAKSIQEKAFKNEKLHIMWDTVVEELSGDDILQKIKVKNVVTGEEQVLEASEEDGMFGI FGFIGRIPTTELFQGTNLKMDERGYIPTDEDMHTNIPGVFTVGDVRVKSLRQVVTAAADG AIAATQAEKYLNEME >gi|333758476|gb|AFIH01000001.1| GENE 1077 1053065 - 1053394 411 109 aa, chain + ## HITS:1 COG:slr0623 KEGG:ns NR:ns ## COG: slr0623 COG0526 # Protein_GI_number: 16331825 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Synechocystis # 3 105 6 107 107 69 34.0 1e-12 MLEVNKDNFEEEVLKAEGYVFVDFFGDGCVPCAALMPFVHSLADQYDGKLKFTSLNTTKA RRLAIGQKILGLPVMAIYKDGQKVEELVKDAATEESIKAMVEKYVALNA >gi|333758476|gb|AFIH01000001.1| GENE 1078 1053460 - 1053591 164 43 aa, chain + ## HITS:1 COG:no KEGG:Shel_25200 NR:ns ## KEGG: Shel_25200 # Name: not_defined # Def: glycine/sarcosine/betaine reductase complex protein A (EC:1.21.4.4) # Organism: S.heliotrinireducens # Pathway: not_defined # 1 43 1 43 156 70 83.0 2e-11 MAILKGKKVIIIGDRDGVPGPAIQACVETAGGEVVFASTECFV >gi|333758476|gb|AFIH01000001.1| GENE 1079 1053607 - 1053933 367 108 aa, chain + ## HITS:1 COG:no KEGG:Shel_25200 NR:ns ## KEGG: Shel_25200 # Name: not_defined # Def: glycine/sarcosine/betaine reductase complex protein A (EC:1.21.4.4) # Organism: S.heliotrinireducens # Pathway: not_defined # 1 107 50 156 156 173 82.0 3e-42 MDLENQKRVKDFAEKFGPENLVVVLGAAEGEAAGLAAETVTAGDPTFAGPLTGVQLGLTV YHVCEPELKAEFDEAVYDDQVSMMEMVLDVDDIVNEMNNIRSEYCKYL >gi|333758476|gb|AFIH01000001.1| GENE 1080 1054178 - 1055713 1414 511 aa, chain + ## HITS:1 COG:no KEGG:Shel_25190 NR:ns ## KEGG: Shel_25190 # Name: not_defined # Def: hypothetical protein # Organism: S.heliotrinireducens # Pathway: not_defined # 1 507 1 508 514 646 62.0 0 MNSIIKGVGYCLNYTPGLMLQHGSTIATERVVNPDGEFLKEMGKHVRSFEDCVAYWPNQV YIGNKTPEELKGVEFPYYDKKVEGASRYGKFGEIMPEAEFLLLAQACDCFEVVYLEKGFV AKHKPELAKDPVITEEILNRVTEGAELSEIQGFVDRHEAEPLFYEGALIGCVKRAHDIDV NLSAEVMLENIMNKASSVLAILHSLKHSGVNANEIEYVIDCSEEACGDVNQRGGGNFAKA AAEIAGLQNATGSDARGFCAGPSHAMIEAAALVKAGAFHTVAVIGGGCVPKLAMNGKDHV KKELPMLEDCLASFCIIVSENDGKSAEINLDIIGRHTVGTGAAPQNVIGSLVADPLERAG LTVKDIDKFSPEMQNADITKPAGAGDVPMANYKMIAALAVKKGWLDKADLANFTEEKGLI GYAPTQGHIPSGVPFVGFAKEDIEAGKMNKAMIIGKGSLFLGRMTNLFDGVSFIIQKNTG KGTGAVSEEEVRSMIAKSMKDFAASILGNQE >gi|333758476|gb|AFIH01000001.1| GENE 1081 1055729 - 1056883 1462 384 aa, chain + ## HITS:1 COG:no KEGG:Shel_25180 NR:ns ## KEGG: Shel_25180 # Name: not_defined # Def: fatty acid/phospholipid biosynthesis enzyme # Organism: S.heliotrinireducens # Pathway: not_defined # 5 383 4 381 382 456 67.0 1e-127 MAKEIKELIADTFLAMAEGLETGSFGKKPRIALTGMGSEHGEENSMQAAVAAARDGVDVV YIGSLKHELVETVEVPDDEAGHDKMDELLSEKKIDGAVTMHYPFPIGVSTVGRAVTPGIG KEMFIANTTGTSSTDRIEGMVKNAIYGIITAKACGYAEPTIGILNVDGARQTEKALKKLQ ANGYPIHFAESSRSDGGCVMRGNDVLRGTPDILVTDSLTGNVLSKMLSSYTTGGSYEAQG FGYGPGIGENYEKLVMIISRASGAPVVANALRFAGDLIKGKVFEVAKEEFKKAKRAGLDD ILAEIREANKPKDSGEDVKEPPKEIVTAAVYGIEVTDLDDAVRCLWKLGIYAESGMGCTG PIIRISEANLEKSEAELKAKGYIS >gi|333758476|gb|AFIH01000001.1| GENE 1082 1057075 - 1058184 1120 369 aa, chain + ## HITS:1 COG:SA0609 KEGG:ns NR:ns ## COG: SA0609 COG3949 # Protein_GI_number: 15926331 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Staphylococcus aureus N315 # 34 361 1 322 326 98 23.0 2e-20 MENKSVRFTKVLSFCGACIAFYIGAGFATMQEIIQYVASYGSQLGIVIAVNAAIYIYTDL SFATNGSRLKLERGGDIYKHYCGKYIGGFFDYFSAFFCYVCFIVMCGGANATAQQQWGLP NGAGAIILSVFVIATVIFGLDGVIQTLGKVGPVIVLFILIVSVISIFNGAANISENIKAV DNNLYKITQVGNGNPFLSGASYAGFMLLWFASFLAEIGAKNRVKEVNIGMLFSAIFIMGT MVIASVALLAHIDVTAQADIPALILANKISPALAGFFAVIIFCGIYTTSVPLLWTSIGRI EKEGTKKYKIYTVVLGIIGCVIACFLPYKDLVNVLYGLNGYLGFALVAFMLFYDVRTKMS KTLVKEDEE >gi|333758476|gb|AFIH01000001.1| GENE 1083 1058310 - 1059002 464 230 aa, chain + ## HITS:1 COG:no KEGG:Tter_0053 NR:ns ## KEGG: Tter_0053 # Name: not_defined # Def: peptidase C26 # Organism: T.terrenum # Pathway: not_defined # 29 215 27 217 256 68 26.0 2e-10 MKKVGIVPSSSLLETENPYHDCSNFIELYTRRITENGGLPLGILNVGGFLSEEALEVCDS FLICGGKRIFPYHFQVIDYALRSGKRLLGVCLGMQAIHSYFIAKREQKNRPGKSILEVYT EMKKEKYFFVEPVKEHWKLNPNRGEEDLVKHKITISEDSVLRKYFPEKEIKGASMHNYRI TEPSEELKVVGHSEDGTIEAIEYGEKVLGIQFHPEIDRSFPGIFRFLTVE >gi|333758476|gb|AFIH01000001.1| GENE 1084 1059094 - 1060338 1149 414 aa, chain + ## HITS:1 COG:PAB1799 KEGG:ns NR:ns ## COG: PAB1799 COG1301 # Protein_GI_number: 14521051 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Pyrococcus abyssi # 16 398 16 414 425 131 28.0 2e-30 MKAKSVANNYRFLIILLLSMIFGAVTGALAPGFSHSIAFLGTLFIRMMFCIVVPMVFASI AGAVAGTKSRKRAGKIMMVTIISFVLTGAFAAIVYFLLCQIFPPVTAAWANLPKGEVGEH ASMTEMVLNFFTVEDFSMLLSRKAMLPLIIFSLLFGFSVNLSGEAGKKVAEFLDSLTAVM MKFVQIVTYYAPIAFFAIFADLVATYGSQITESYARALLLYYPVCFIYIFTAFPIMAYIG AGTDGVKMMFRHILKPAVVSLGTCSSVATIPTNMEAAAESGISKDVSDIVIPLGATMHMD GSCFSCVLKIVFVMGALGTPVHFSELPAIVLVAVLSSVGMSGVPGGGYIGEYIIASIFFP NNMELAFPILVAIGNLIDPPATMINAAGDYVVSFMVSRFVDGKNWMKKMSLQEK >gi|333758476|gb|AFIH01000001.1| GENE 1085 1060419 - 1060880 335 153 aa, chain + ## HITS:1 COG:CAP0111 KEGG:ns NR:ns ## COG: CAP0111 COG0454 # Protein_GI_number: 15004814 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Clostridium acetobutylicum # 1 153 10 162 162 133 39.0 1e-31 MEDLFAVSYVEKECFPPLEAATEDSFRERLQFYGNHFLLLYKEDQLISFVDGFCTDDMDL TDEMYEKAELHQEEGKWQMIFGVNTVPAYQRRGIATKMLTEFIRMAKEEGREGLVLTCKK EKIPFYARLGFSSEGLSESVHGNVEWYQMRLKF >gi|333758476|gb|AFIH01000001.1| GENE 1086 1061257 - 1062069 818 270 aa, chain + ## HITS:1 COG:lin0435 KEGG:ns NR:ns ## COG: lin0435 COG0428 # Protein_GI_number: 16799512 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted divalent heavy-metal cations transporter # Organism: Listeria innocua # 17 270 25 269 269 197 45.0 2e-50 MDGKYIALGILIPFVGTSLGSACVYFLKGNKTTGGNAPVIPPDIEKGLTGFAAGVMVAAS IWSLLIPAMEESSSLGRLAFLPAVIGFWIGTFFLFALDKLIPHLHLHAEKAEGPRSSFQR TTMMLLAVTIHNIPEGMAVGVVYAGMLTGDVGLSLGAALALSIGIAIQNFPEGAIISMPL HANGQNKHKAFVNGVLSGAVEPVAAVLMLLFAPIFSPLMPYFLSFAAGAMIYVVVEELIP ETAEGEHSNWGVLLFAVGFTVMMALDVALG >gi|333758476|gb|AFIH01000001.1| GENE 1087 1062095 - 1063804 222 569 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 322 567 267 521 563 90 29 4e-16 MKKLNKELYRTPFSVGKKWFLVSMISMVILSAYNLIISWLLQKIIDLAAGIDKTPFYQLA LVSLLSFLVFIVFYFIFRYAHPKFLQTLSTSYKDLLFAKILRNNSRMVSEIGSGQFLSKL SNDLKSIEEHYFDFYITLIDIGISFVGAIVLMLLYSPVLTMAAIALSILPLLVSIPASKE VAKTEKNLSKENAGFMEFMRDTLSGYSVIKSFQAESELESRFHEENVKIEKAKFLRRFAE ENINLLSTAASVVMRLGVFLFGAWLSLSNPHVTPGIVLVFLQLVTFVITPIEKIPSLFAN RQAARSLIAQTAELLYEKPDEQEKTEIHSLKSAIEIQNLSFSYEASEKALRNVSLTFHAG KKYAIVGTSGSGKSTLFKLLTKYSSEYDGNILFDGIDLRNITYSSLSKSISTVQQNVFVF HDSIYNNICLYKNIAEKEFDYVIQKSGLSSLIQQKGKDFSCGTNGNKLSGGEKQRISIAR ALLRNASILLMDEASSALDEKTADEIMHSILDMPDTTSLVITHRLNSTLLKKYDGIFVLH HGKIVEFGAFDELMKNKGLLYSLILLSQS >gi|333758476|gb|AFIH01000001.1| GENE 1088 1064122 - 1064916 587 264 aa, chain - ## HITS:1 COG:BS_ymfI KEGG:ns NR:ns ## COG: BS_ymfI COG1028 # Protein_GI_number: 16078750 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Bacillus subtilis # 2 263 3 240 242 145 36.0 1e-34 MKLAIITGASRGIGRSAAKAFAKEGYTLLLNCEKNIALLKELKTEIEGSFPESQLAKRRV YDEKCTVDKPSPIEITLKEGSFSSAFLEGYFHAKETERVEIDELVLIINQGKSVLRLTQE YSADETDSLLQANLLEPFQLVQRMIPYLLRAKEGRILFSSSVWGNVGASMESLYSLTKGG INSFVKALGKELAPSHIAVNAVAFGAIDTDMNAWLTEEERSSLEEEIPYGRMATVEEAAD FLLLLSKAPLYLTAQVIPFDGGWI >gi|333758476|gb|AFIH01000001.1| GENE 1089 1065056 - 1066162 780 368 aa, chain - ## HITS:1 COG:CAC1488 KEGG:ns NR:ns ## COG: CAC1488 COG0463 # Protein_GI_number: 15894767 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Clostridium acetobutylicum # 30 368 1 338 338 353 51.0 4e-97 MFRSKYEPFRKQNIAHFLYDTHYELNGESMKLISFAIPCYNSSAYMGKCIESILPAGDEV EILIVDDGSQKDNTLEIAKEYEKKYPTICKAIHQENGGHGEAVNTGLRNASGLYFKVVDS DDWLDSEVLLEILEKIRNITLSGDSIDLFVANFVYDKVGQENKKVMSYGNAFPEEKIFGW NEMKRFNLGQYILMHSVIYRTKLLRDAGLVLPKHTFYVDNLFVYLPLPHVKKIYYCNKNL YHYYIGRDDQSVNETVMIGRLDQQFRVNRLMIDSCDVMKVQPKKLRNYMILYLEIITTVS SVLSIKSENEENMERKKELWNYLKKEHFPLWLRMRSSFLGQGVNLPGKIGNKLTILAYRL SRKFYGFN >gi|333758476|gb|AFIH01000001.1| GENE 1090 1066205 - 1066618 403 137 aa, chain - ## HITS:1 COG:DR2094 KEGG:ns NR:ns ## COG: DR2094 COG1959 # Protein_GI_number: 15807088 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Deinococcus radiodurans # 1 136 46 179 197 104 40.0 4e-23 MMISTKGRYALSTLIDIAKNQDENSPVSIKEMAERQGISLKYLEQIISLMVKGKLLKSVR GAKGGYLLSRDAKDILVGEILNAAEGTLAPVDCVRDGVSCEKSASCPTFPLYKEIEDAIY SVVNRYTLWDLVKSSKA >gi|333758476|gb|AFIH01000001.1| GENE 1091 1066744 - 1066917 162 57 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPKIIPIKELKDMTKVSEICRKERIYKDLEIAESDILSGRTKTAGLVLKELQRKTVE >gi|333758476|gb|AFIH01000001.1| GENE 1092 1066938 - 1068467 1404 509 aa, chain + ## HITS:1 COG:SPy0500 KEGG:ns NR:ns ## COG: SPy0500 COG0433 # Protein_GI_number: 15674605 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Streptococcus pyogenes M1 GAS # 13 509 11 500 500 447 47.0 1e-125 MAKIDFAINSEGQRVSIHSEKLNRHGFIAGATGTGKTVSLKVLAERFSALSIPVFLSDFK GDLSGLFKAGEATEKIEERRKKCGLSESEFSYRAFPVEFFSFTKEGGIPLRTTVSEMGPL LLSRILNLSDVQSDILRIVFRIADEEGLLLLDLKDLRSMLQYVSGNSKEYEKSYGKLSTQ SLNAILRSVVALEDRGGEEFFGEPAINVKDFFRLTTNSEGVISILDAKSVASDPKIYSTF LLYLLSELYENLPEVGDLEKPRMVFFFDEAHLLFQDSSKALLEKITQVTRLIRSKGIGIY YVSQNPADIPEEILSQLGNKIQHGLQAYTPGERKKLKAVADSFRENPAFDTLEVLENLGT GEALVSCLDPDGKPTMVEKVMIFPPQTFLGELSPEEKEKAKLGSDLALKYDEMIDRDSAY EMLTRKGLSEEAEKEKAVSEKEEERTKGQTSKLQNRVVKSVSRSVSGSIGREVGASIGKS VFGKGMGRRLGGNIGAALGRGILETLFGR >gi|333758476|gb|AFIH01000001.1| GENE 1093 1068681 - 1069610 670 309 aa, chain - ## HITS:1 COG:no KEGG:BL1264 NR:ns ## KEGG: BL1264 # Name: not_defined # Def: hypothetical protein # Organism: B.longum # Pathway: not_defined # 83 220 341 474 561 75 33.0 3e-12 MTDKQIKRYFNMTALGFFSYAILIQVLAVLAVLLIDLLFPALSSGAMYYSMMVSVIPCLL FLYFLFRNNNLVSLDETEEPSSRFSPPVFLHFFLIFCGVQWISSLLTIPLVLLFQKMGLD LSYSEMAAKGGALNDIPMLVYTILIAPIVEELVFRGVFYKRFKAFGSFFTAFACSLFFAL IHSNFLQFIPAFMMGFVLFAIRDKYGLRYSILLHLTNNALAILVNNLGTAQPWLMSAYGL LLLGGSVYTVISLIKNRAKLVALCPDEKGRKALKLFFSSPLVWVDIVVLVILAIVILFNP GAEEMTTTV >gi|333758476|gb|AFIH01000001.1| GENE 1094 1069830 - 1071545 1648 571 aa, chain + ## HITS:1 COG:CAC2232 KEGG:ns NR:ns ## COG: CAC2232 COG0608 # Protein_GI_number: 15895500 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-specific exonuclease # Organism: Clostridium acetobutylicum # 4 565 2 583 587 422 40.0 1e-118 MRKKNWYIYGKKADFQSLADKLNLDPVLIRILRNRDLETEEEMREFLSGEDIPSPLFLPD SIRFINRLERAVDGKEKIRIVGDYDVDGVCATTILYLAISQFTEVGQLSFVIPHRINDGY GINKHIIEEAKKDGVQVLITCDNGISAFSELSYAKEVGIDVLLTDHHDLRVDERGKKIYP EAFSVVNPKREDSKYKNAEICGAMVVYLLMKMLIEKRGRGEEILDELLCFAGIATVCDVM NLQKENRVVVKKTLELLPRTENIGLSALLSLYWKEGERELSSFTLGFQLGPAINASGRLE SAMEAISLFLEKDREKAMARAEHLKALNEERKSLTGNAVEEARKLAEAEEGKKVLLLYLP ELHESLAGIVAGRIKEEFYRPTFVVTKTEEGKVKGSGRSIPAYPMAESLEKEKELLLRFG GHPMAAGFSLEEKNLPLLREKLEEDCTLSPEDLVEKLWIDTVLPFSYCTEEFTESLRRLE PFGKGNEKPAFAEKEVEIQGLRILGEHRNVVKLNLMDRQGKRMEGIYFTDGESFLSEKGD RKKLNIVYYPRINSYNGEKQVQLVISAHSFV >gi|333758476|gb|AFIH01000001.1| GENE 1095 1071648 - 1072901 1450 417 aa, chain + ## HITS:1 COG:CAC2264 KEGG:ns NR:ns ## COG: CAC2264 COG0112 # Protein_GI_number: 15895532 # Func_class: E Amino acid transport and metabolism # Function: Glycine/serine hydroxymethyltransferase # Organism: Clostridium acetobutylicum # 9 416 6 411 411 506 61.0 1e-143 MVKEIMNYVRQMDPEVGAGLFSEYERQQHNIELIASENILSTASMIAMGTVLTNKYAEGY PGKRYYGGCQEVDKVEDIAIERVKKLFGAEYANVQPHSGAQANMAVTMAVCKAGDTILGM SLDAGGHLTHGSPVNFSGLFYNIVPYGITEEGYLDYDEIRALAKQHKPKMIIAGASAYPR VIDFKKFREIADEVGAVLFVDMAHIAGLVAAGVHPSPIPYADIVTSTTHKTLRGPRGGII LSTAAAAEKYNFNKAVFPGIQGGPLEHVIAAKAVCFGEALKPEYKTYQEQVVKNARALAE ELMKRGFKLISSGTDNHLMLVDLTNFSDVSGKDMQNRCDEVNITLNKNSIPREPRSPFVT SGVRIGTPAITTRGFKEEDMAVIADCLYKVVSDFEGTKEEVRAQVLALTKKYPIYEG >gi|333758476|gb|AFIH01000001.1| GENE 1096 1072949 - 1073578 374 209 aa, chain + ## HITS:1 COG:no KEGG:Tresu_2165 NR:ns ## KEGG: Tresu_2165 # Name: not_defined # Def: hypothetical protein # Organism: T.succinifaciens # Pathway: not_defined # 8 206 23 209 210 87 32.0 3e-16 MLLLELIVVLSAFSEDGFTTLRYYTTDSNLLCGIASLLYLLWKLPALNREGKGVVSRYFQ NKDGGTVELSAARNGISLLRFISTVCLMVTFVVVLLVLGPEQGYAHEFLEGRKIFSHLIC PFLSLLLLLFEEGDIPLKWVSYALFTTLAYAIPLILLNALGLVSGPYSFLKIREQSLGKT VFWIVTILSGNALLALGALFLRRIKNRRS >gi|333758476|gb|AFIH01000001.1| GENE 1097 1073830 - 1074405 555 191 aa, chain - ## HITS:1 COG:no KEGG:Closa_2116 NR:ns ## KEGG: Closa_2116 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 2 186 5 190 195 186 61.0 6e-46 MNQKVQKLTLSALFAALSYVVFTFLQMKIHVGGDTTSIHLGNAVVVIAALVLGGPLGGLA GALGMTIGDLLDPAYITYAPKTVICKLVIGLIAGFIAHKLGKINDSQDRSHIFKWVLLAA IFGLLANVILDPTIGYFYKLLILGKPAAELSFKINVAASAINAVLSIIVSVLVYMELYPI LRKEHLGLQKV >gi|333758476|gb|AFIH01000001.1| GENE 1098 1074805 - 1076109 1084 434 aa, chain + ## HITS:1 COG:L75975 KEGG:ns NR:ns ## COG: L75975 COG2873 # Protein_GI_number: 15672055 # Func_class: E Amino acid transport and metabolism # Function: O-acetylhomoserine sulfhydrylase # Organism: Lactococcus lactis # 7 434 2 426 426 460 53.0 1e-129 MSEKNRTGRNFSFNTRAVHVGQEKADPASGARAVPIYQSTAFVFENCDQAAARFALKEAG NIYTRLTNPTQGVLEERIASLEGGVAALALASGAAAVTYAFKAVAHQGDHIVSARNIYGG TYNFLKHTFQDSGVETTFVDPYDLSEAEKAIQENTKALYIESLGNPNGDVVDVEAWANLA HKHGLPLIVDNTFATPYYVRPIEYGADIVVHSATKFIGGQGSTMGGIVVDGGKFDWTKGN KWPWLTEPNPSYHGVSFARDTAPAVLATYIRAIILRDEGAAISPFNAWLLLQGTETLPLR VERHAQNALKVAEYLNKHPKVEHVSHPAVSKDPLQQELYKKYFPNGGGSIFTFDIKGDAE TTKKFIDHLELFSLLANVADVKSLVIHPASTTHSESSKEELLKQGIKENTVRFSIGIEDI GDILTDLEEAFKAI >gi|333758476|gb|AFIH01000001.1| GENE 1099 1076264 - 1077034 697 256 aa, chain + ## HITS:1 COG:CAC1285 KEGG:ns NR:ns ## COG: CAC1285 COG1385 # Protein_GI_number: 15894567 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 1 247 1 243 250 160 40.0 2e-39 MHHFFVDKSEIIGDEIKLYGDDFHHLQKVLRGKIGEEIIISDGDAVDYHCKIKGYGDDCA LLSVSFLEEMHELKTRLILLQALPKGEKMELIIQKAVELGVTEIIPLESENCIVQLKGEK AEKKRKRWQSISEAAAKQSKRSIIPEVLPVTTWKEAFSTLKDAEMKLLPYENERGVGFTK EVLHQAEELGEKAGSKIVLCIGPEGGFSIQEVEEAKKEGFLPISLGKRILRTETAAIAAL SLLMMHLEFAENKEAE >gi|333758476|gb|AFIH01000001.1| GENE 1100 1077031 - 1078188 1074 385 aa, chain + ## HITS:1 COG:CAC2972 KEGG:ns NR:ns ## COG: CAC2972 COG1104 # Protein_GI_number: 15896225 # Func_class: E Amino acid transport and metabolism # Function: Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes # Organism: Clostridium acetobutylicum # 4 382 3 377 379 303 43.0 3e-82 MRSIYLDNSATTKVYPEVAEEMCKTMMADYGNPSAKHLMGVEAEKYYRQSREEIAETLKV KAKEILFTSGGTESDNMALIGGSFAKVRQGKHIISSAIEHPAVYKTLEFLEKQGFEISIL AVDEKGHISLEELEKTIREDTVMVSIMTVNNEMGAIEDIHAIGELIKKKNPNCLFHTDAI QAYGKMILRPKKDFVDLLSVSGHKLHGPKGIGFLFIDEKVKIDPILFGGGQQGGLRSGTL NIPGITGMGLAAKMVYQDFPEKIERLYQLKDYFIEELLKLPEVKVNSEKGAASAPQIVSA SFYGVKAEVLLHALEDKGIYVSSGSACSSNHPGISGTLKAIGLGPKELDSTLRFSFSFLT EKRELTDTIEALKELLPVLRKFYKA >gi|333758476|gb|AFIH01000001.1| GENE 1101 1078248 - 1079339 1092 363 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227872814|ref|ZP_03991128.1| possible ribosomal protein L11 methyltransferase [Oribacterium sinus F0268] # 1 357 1 358 359 425 61 1e-117 MVWRKIAVKTKEEAVEILAAYLFDRWEIEGVEIEDGKGLTEEEAKIIFADILPEETAGNG EASLSFYLEILPEEEKKARKALVEKEFSDETVDHSYTLNSSNIFTEEECREILSDLKREL SEMAEYTEIGSGEISVSETEDKDWMNAWKDFFHSFRVGKLLIKPSWEEEEPKEGEFAISL DPGTSFGTGQHETTKLCLLSLEKYLKEGDRVLDLGTGSGILGIAALKMGAKEVLATDLDL LTKEAVAGNCKENGISEKDFHLFIENILGEEESAKSLQAAFRKEPFEVVCANILAPVIVS LTPLVPSFLKQDGIFIASGIICDKAEEVRKALQAEASLEILEECVEGEWHAFTARKKTSK EES >gi|333758476|gb|AFIH01000001.1| GENE 1102 1079452 - 1079946 497 164 aa, chain + ## HITS:1 COG:FN1468 KEGG:ns NR:ns ## COG: FN1468 COG1853 # Protein_GI_number: 19704800 # Func_class: R General function prediction only # Function: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family # Organism: Fusobacterium nucleatum # 1 154 31 185 197 172 49.0 3e-43 MLTVAWAGTVCSTPAMLSISVRKERYSHAMLMETGEFVVNLPTEDLVRETDEAGVRSGRD FNKWEALHLHQEEGKMLSVPMISECPVNMECRVKQVLELGSHDLFLAEIVAVHVDSSLLD EKKRLQLEKAKLLAYSHGQYFGLGKVLGSFGFSVRKGAKKNKGK >gi|333758476|gb|AFIH01000001.1| GENE 1103 1080022 - 1081224 1057 400 aa, chain - ## HITS:1 COG:CAC2971 KEGG:ns NR:ns ## COG: CAC2971 COG0301 # Protein_GI_number: 15896224 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine biosynthesis ATP pyrophosphatase # Organism: Clostridium acetobutylicum # 6 397 5 384 384 332 47.0 7e-91 MEYQAFLIKYAEIGTKGKNRYVFEDALAKDIRMKLKRATGEYYVARERGRIYVHVKSERY DYEECMDALQHVFGIAGIAPMVQIPYSADFADLEKAVLSYFRAAYGDSPVSFKVESRRAE KSYPMSSPEIEMELGHSILENFPNTRVDVHKPEVKLRIEIRQFINIYGKIIPGLSGMPLG TNGKAMLLLSGGIDSPVAGFKVAKRGALIEATYFHAPPYTSERAKIKVVDLARQLSTYTG PIMLHVVNFTEIQLAIYDRCPHDELTIIMRRYMMRIAEALAYKNGCIGLITGESIGQVAS QTLQSLVCTNEVCTLPVYRPLIAFDKQEIVDVAEQIGTYETSIEPYEDCCTIFVAKHPVT KPIVEKIRKSEEKLFPEIDAMVEKAVNEVESILIRKEREN >gi|333758476|gb|AFIH01000001.1| GENE 1104 1081367 - 1081609 426 80 aa, chain - ## HITS:1 COG:no KEGG:Closa_0890 NR:ns ## KEGG: Closa_0890 # Name: not_defined # Def: Phosphotransferase system, phosphocarrier protein HPr # Organism: C.saccharolyticum # Pathway: not_defined # 1 79 1 77 77 100 82.0 3e-20 MKTVRISLNSIDKVKSFVNDLVRFTDVDFDLVSGRYVIDAKSIMGIFSLDLSKPIDLNIH ADESRLDEIVNTLKPYILEA >gi|333758476|gb|AFIH01000001.1| GENE 1105 1081768 - 1083153 409 461 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|228000795|ref|ZP_04047796.1| SSU ribosomal protein S12P methylthiotransferase [Brachyspira murdochii DSM 12563] # 10 406 6 384 440 162 29 8e-38 MELKGLRFAMHNLGCKVNSYEAEAMSEAILKEGATLVPFQEEADIYLINTCSVTNIADRK SRQMIHQAKERNPDALVIATGCYVEGKKEELKKDKGIDILIGNSGKGKIVELIKAYRDAM LENDGKIEDYLPPVKEEGEYENLFLSKPLDRSRAFVKIQDGCNQFCAYCIIPYVRGRIRS RKIEDCLQEIEHLGQEGISEIVLTGIHLSSYGLDFQNLSYEYASKMAESGEALISLIEKI GEIPSIKRIRLGSLEPRVITENFVSRLRAVDGICPHFHLSLQSGAAKTLKEMNRHYTKEE FKEAVDCIRIAFPLAAITTDVIVGFPGETEEDFQESRDFIEEISFYDLHIFKYSRRKGTR ADEMQGQITEKVKKERSKILLDLALKDSEKFRKQFIGKRSEVLIEEVRELEGETYYTGFN KEYIRFYIPLQKDSALEIGGVYPVLAEKAMEESLLGKLFSE >gi|333758476|gb|AFIH01000001.1| GENE 1106 1083292 - 1084314 955 340 aa, chain + ## HITS:1 COG:BS_hrcA KEGG:ns NR:ns ## COG: BS_hrcA COG1420 # Protein_GI_number: 16079603 # Func_class: K Transcription # Function: Transcriptional regulator of heat shock gene # Organism: Bacillus subtilis # 1 336 2 335 343 184 31.0 3e-46 MDQRKLIILTTIIKNYLETGEPVGSRTISKYSGLNLSSATIRNEMSDLEEMGYILQPHTS AGRVPSDKGYRFYVDQLMEKQERDLSDVRSSMFDRIEKLESALQSLVRNIASDTHYTALV SGPRMEKNRIKFLQISLVEKGKLLFLLMFEGNIIKTMTVDIDEDLEQNAILSINLLLNDV LGGHSVEEITEEYIRTLLDRSRHRKTMGLLLQSLESMLRTDEQDVEIYTSGATNIFKYPE LMDSENASKLIFALESKEELAGLLQEAEEKEEDNKSIQVYIGKESPLQDMADCALVTAKY RLGNGMHGTIGVIGPKRMDYEKVLDTLSRLIQEMGEIPLQ >gi|333758476|gb|AFIH01000001.1| GENE 1107 1084327 - 1085007 584 226 aa, chain + ## HITS:1 COG:alr2445 KEGG:ns NR:ns ## COG: alr2445 COG0576 # Protein_GI_number: 17229937 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone GrpE (heat shock protein) # Organism: Nostoc sp. PCC 7120 # 59 224 70 228 248 92 38.0 8e-19 MSKKHNEDEKWKRQSHEGGEQGRECTKEASSEGVKTAEECSTENCSGNAGEQEVPGEEQT SSTQTLGEDSEEASSGKENSEKEENAELLQLKDKYLRTLAEYENFRKRSEKEKAQMFELG AKSIIEQLLPVVDNFERALEHIPEEEKENSFAKGVEGIYKQIQKMFSDCDIQAIEAVGQK FDPALHNAVMTEEEGDAEEDTVTADLQKGYTYRGNVVRHSMVKVKK >gi|333758476|gb|AFIH01000001.1| GENE 1108 1085166 - 1087040 2351 624 aa, chain + ## HITS:1 COG:CAC1282 KEGG:ns NR:ns ## COG: CAC1282 COG0443 # Protein_GI_number: 15894564 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Clostridium acetobutylicum # 1 622 1 610 615 730 68.0 0 MGKIIGIDLGTTNSCVAVMEGGKPVVIPNAEGMRTTPSVVAFTKNGERLVGEPAKRQAVT NADRTISSIKRHMGTDYKVSIDGKDYTPQEISAMILQKLKTDAESYLGEKVTQAVITVPA YFNDAQRQATKDAGKIAGLSVERIINEPTAAALAYGLEDESEQKVMVYDLGGGTFDVSII DIGDGVIEVLSTNGDTHLGGDDYDDRITKWLVEEFKSQEGVDLSQDKMALQRLKEAAEKA KKELSSATTTDINLPFITATAEGPKHLDMKLSRAKFEELTADLTERTAIPVQNSLRDAGL TASELGKVLLVGGSTRMPVAQEKVKQLTGKEPSKNLNPDECVALGAAVQGGKLSGEAGAG DVLLLDVTPLTLSIETLGGVATPLIKRNTTIPTRASQVFSTAADNQTAVDINVVQGEREF ARDNKSLGQFRLDGILPAQRGVPQIEVTFDIDANGIVNVSAKDKGTGKEQHITITSGSNM SKEDIDKAVNEAAQFEAADKEKKEAIEVRNGADSIVFQTKKALTDVGDKISDSEKAGVEA DLKALEDVLSANPLESITKDGAEKIKAAQEKLMQSSQALFTKVYEQAQAAGAAGAGAEAG SSANAGQSAGNADDNVVDGDFKEV >gi|333758476|gb|AFIH01000001.1| GENE 1109 1087250 - 1088374 1049 374 aa, chain + ## HITS:1 COG:YPO0469 KEGG:ns NR:ns ## COG: YPO0469 COG0484 # Protein_GI_number: 16120798 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone with C-terminal Zn finger domain # Organism: Yersinia pestis # 4 368 3 350 379 303 47.0 5e-82 MAEKRDYYEVLGVEKNADDSAIKKAYRQLAKKYHPDANPGDETAAAKFREASEAYAVLSD PDKRKAYDTYGHAAFDANSAAGASSGFGGFDFSGMDMSDIFSEFFGGGFSGGGFSGGRAY GRRANMPEKGDNIRVGIRITFDEAIKGVKKNIKIRYKDTCKTCNGSGAKPGTEKTTCPRC NGAGQVRMTQQSLFGMIQQVTTCPECHGTGSIIKEKCPDCKGAGYINTEKTMEISVPAGI DDGQAIRRSGGGDPGRNGGPRGDLLVEVSVSDHPFFKRQGINIYSTEAISFPKAALGGTT IVKTVDGPVELKIAAGTQSETRTRLRGKGVPSLQNPNVRGDHYVTLVVETPKKLNKKQKE ALKAYAESCGESVE >gi|333758476|gb|AFIH01000001.1| GENE 1110 1088585 - 1090717 2020 710 aa, chain + ## HITS:1 COG:CAC0120 KEGG:ns NR:ns ## COG: CAC0120 COG0840 # Protein_GI_number: 15893416 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Clostridium acetobutylicum # 358 710 210 515 555 213 38.0 1e-54 MKEKRPVVKKAGSWKKISLAGRISAILCVSMLVVFVLMNILILAAAGQSFEKVNADYLYS TTSLNVERAKKSITLAENTAKAIQDHLEEMYTETDNGTPSVPSVLKDSILLTEKRSYEEN YLLDSVWEMIRHDEHIMGAGVFFEPNGFQQGVPEYAMYLGRDNGDENKRFSKFLDYKFYG NGAEEYYTKVAAEKKSHVVDPFVSSITGETIFVLVVPVLYKDEFKGAIVVDLNVTMFKTL GQDESGEGAKTFFDVVNQDGKFVYSSNPEAVGKNIAEYVGEDNFKNNIQSRFADRETFHV KDSHRVRYFSPLTIYDTDWYVQSAMSLDVYNAGKNRLLYTLVFAEFVIFVLLQVVIFFTT RRSLKPLGKLAKESDKIADGNFNIDISYPYQDEIGRLIQSFKRIIERLNYVVSDLHSKLG AFSQGDFGQEIHEDENYKGDFHPILISLQEISGSLNATLKNVRNSSSEVSSSAGQVSSMA QRIADGTTKQASSVSDLSGTMDNISKQIHHTAKQAEKAQELGVLSGSHVETSNQKMTDMQ GAMEEITEKSKEISKIIKTIDDIAFQTNILSLNAAIEAARAGEAGKGFAVVADEVGNLAK KSQEAAQNTSVLIEETIGAVQKGARFTAETAEALHSVSDSTNQVNELILEISKASEEESE GINKLSEGIQEISAVVQDNSATAEESAATSQELSAQANLLNNLVDKFNLR >gi|333758476|gb|AFIH01000001.1| GENE 1111 1090935 - 1092539 1701 534 aa, chain + ## HITS:1 COG:VC2738 KEGG:ns NR:ns ## COG: VC2738 COG1866 # Protein_GI_number: 15642731 # Func_class: C Energy production and conversion # Function: Phosphoenolpyruvate carboxykinase (ATP) # Organism: Vibrio cholerae # 2 533 10 540 542 780 70.0 0 MANLDLTKYGITGTTEIVHNPSYETLFKEETAESLVGYEKGRVSELGAVNVMTGIYTGRS PKDKYIVMDKNSKDTVWWTSEEYPNDNHPASEEAWACCKELAKKELSNKRLFVVDAFCGA NKDTRMAVRFIVEVAWQAHFVTNMFIKPSKEELENFEPDFIVYNASKAKVENYKELGLHS ETAVMFNITSKEQIILNTWYGGEMKKGMFSMMNYYLPLKGIASMHCSANTDLDGKHTAIF FGLSGTGKTTLSTDPKRLLIGDDEHGWDDNGVFNFEGGCYAKVIDLDKDSEPDIYNAIRR DALLENVTVDANGKIDFKDGSTTENTRVSYPINHIEKIVRPISAAPDAENVIFLSADAFG VLPPISILTPEQTEYYFLSGFTAKLAGTERGITEPTPTFSACFGQAFLELPPTKYAEELV KKMKKTGAKAYLVNTGWNGSGKRISIKDTRGIIDAILNGDVVKAETKTIPFFDFEVPTAL PGVDPKILDPRDTYSDVKEWEDKAKDLAGRFVKNFKKYENTELGKSLKNAGPKC >gi|333758476|gb|AFIH01000001.1| GENE 1112 1093011 - 1094255 916 414 aa, chain + ## HITS:1 COG:CAC3063 KEGG:ns NR:ns ## COG: CAC3063 COG1316 # Protein_GI_number: 15896314 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Clostridium acetobutylicum # 32 240 70 276 339 127 37.0 3e-29 MKGVFFLCLLLVGIFFLWRFLSPYIGKQYRTIAIFGLDSRDGNKEAGALSDVIMLASINK RSGEIKLTSVFRDTYSEVDGNGKYHKMNEAYFLGGHKQAIKALERNLDISIDDYVSFNWA AVAKGISALGGVDLDLSDAEFYYINAFITETVESTGIPSVHLEHAGMNHLDGIQAVAYGR LRLMDTDFNRTARQRKVLSLAMEKAKKAGPVKMISVATQVLPEISTSMNMADFTDLASQL GRLHLGETTGFPFARTTMKIKKMDVVIPATLESNVIELHQFLYGEEHYHPSATVKKISDH IAEVSGVTKPLENAEEAGTGGGTVRKKDKKQEEKTTKKEEKSSKSETEEKKEEHKSETEK KLSETEESSIEVKKEIEKETEKEEEKVTEENSLGPAGDIGKKVIESSEENAENP >gi|333758476|gb|AFIH01000001.1| GENE 1113 1094835 - 1095572 706 245 aa, chain - ## HITS:1 COG:CAC0187 KEGG:ns NR:ns ## COG: CAC0187 COG0363 # Protein_GI_number: 15893480 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase # Organism: Clostridium acetobutylicum # 2 238 1 237 241 248 51.0 9e-66 MIQIVKVKDYATLSKKAAMYIAAEIVQREKPVLGLATGSTPVGTYQVLREMYQEGKLDFT AVRSVNLDEYRGLAPEDSHSYRYFMNQELFHHVNIAKENTHVPDGSLSDAQEACESYERL IQSLGGIHLQILGLGHDGHIGFNEPSDSFPAKTHCVQLTEETISANQRFFNSKDEVPREA YTMGIGTIMQAEKILLLVSGRDKAAILKKVLEGPVSPEVPASILQFHKNVILIADEDALS KCSSV >gi|333758476|gb|AFIH01000001.1| GENE 1114 1095782 - 1096576 655 264 aa, chain + ## HITS:1 COG:SP2136 KEGG:ns NR:ns ## COG: SP2136 COG5263 # Protein_GI_number: 15901950 # Func_class: R General function prediction only # Function: FOG: Glucan-binding domain (YG repeat) # Organism: Streptococcus pneumoniae TIGR4 # 48 145 502 620 621 71 35.0 2e-12 MFKDKKNQNGIEKKNRFAEHGKGFVSALLLCFTIGVFSLASGVSVKAAEGWVNREGSWYY YPSTEEEHYTGWIRSEDSGRWYYIVDGQMQTGWASWKGKWYFLNADGGMAEKQWVGNFYV GEDGAVLTNTETPDGWKLSGNGSYLLKGKPTEELNEKTARYIKVLMEHPDARAVFDSPSQ LVMENGNGYPFVIFKKMSLYDSKTSELLYEGDAGFHRNAVLEYYDGEELKLMQTMDFMQH HYLSGKQVLIDPAGLITYVVGEKR >gi|333758476|gb|AFIH01000001.1| GENE 1115 1096573 - 1097505 945 310 aa, chain + ## HITS:1 COG:SPy0898 KEGG:ns NR:ns ## COG: SPy0898 COG0583 # Protein_GI_number: 15674920 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Streptococcus pyogenes M1 GAS # 1 295 1 294 301 281 47.0 1e-75 MTLQQLRQIIAVADSGSINEAAKRLYITQPSLSATIKTVEKETGIDIFSRSNRGIVATPE GEEFLGYARQVSEQYQLMEDKYLTGTPYKQKFGVSMQHYTFAVEAFIHLLRQYEKDNLYE FSIFEGRTIDVIENVRKQISELGIIYQNDFNENVIGKILREGELEFVPLFSCNIYVFMAK SNPLAKKNLIQMEDLMDYPCCSFDQGERNSFYFAEEVLSTYSYKKLIKVNDRATILNLMV GLNGYTLCSGIICQELNGPEYIAIPLDTKESMRIGYIKHKKMRLSELGKKYVEELKQYEG QQSGPISAGM >gi|333758476|gb|AFIH01000001.1| GENE 1116 1097607 - 1098104 377 165 aa, chain + ## HITS:1 COG:no KEGG:Closa_2169 NR:ns ## KEGG: Closa_2169 # Name: not_defined # Def: PTS system, N-acetylglucosamine-specific IIBC subunit # Organism: C.saccharolyticum # Pathway: Amino sugar and nucleotide sugar metabolism [PATH:csh00520]; Phosphotransferase system (PTS) [PATH:csh02060] # 73 158 386 478 478 63 30.0 3e-09 MTLDFIVPMLILLQWRTNIPFLDQMLEKLSKLSGGREEIVLLALFILLLLFLLFIRRVIR KRRQKEALQYHIEEKDRYHISMEKQDLHKLVSLLIEGLGGKDNILSVRFDAKKLKVKIKE YALVQENTLRMAGFPGVVRPSKDEVHLLIGDEAGELCEALQNLNL >gi|333758476|gb|AFIH01000001.1| GENE 1117 1098118 - 1098678 545 186 aa, chain + ## HITS:1 COG:CAC3354 KEGG:ns NR:ns ## COG: CAC3354 COG0534 # Protein_GI_number: 15896597 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Clostridium acetobutylicum # 3 184 2 183 452 115 32.0 3e-26 MKKSYEIDMTKGSIFPKILSFSFPLMLTGMLQLLFNSADVIVVGRFVGHKAMAAVGSTGT VVYLLVNLFLGLAMGVNVCIAQSIGAGKQKDTEEVLSTAFCAAIVSGILVFFLGNCIIRP MLILIAIPEDVFQDAEIYLRYYFFGVPFLILYDFLAAIFRAVGDTKRPLYTQIVAGVINV LLNLFL >gi|333758476|gb|AFIH01000001.1| GENE 1118 1098705 - 1099484 571 259 aa, chain + ## HITS:1 COG:FN1653 KEGG:ns NR:ns ## COG: FN1653 COG0534 # Protein_GI_number: 19704974 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Fusobacterium nucleatum # 1 245 198 442 445 132 31.0 5e-31 MAIATSISEAFSSIVLFVLLLKEEGALKLPLHHLRIYPKKLYRIFQLGIPAGVQGMLFSI SNLSIQSALNSFGSMAMAGATVAGNIEGFVYIAMNSVSQGMLSFTSQNLGAKQYKRINDI LRNCVLALGMIAVISNILVLLFSKSLAELFTNSEEVVRYAQERMFIIICPYCLFGLMDVL VGGLRGFGYSFQPMIISLIGICCTRVFYVLVLFPLPAFHGLKQLYFSYPVTWVITLSCLW VLYKKVRNTFPATNEEGVV >gi|333758476|gb|AFIH01000001.1| GENE 1119 1099481 - 1100923 1347 480 aa, chain + ## HITS:1 COG:CAC1002 KEGG:ns NR:ns ## COG: CAC1002 COG1488 # Protein_GI_number: 15894289 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid phosphoribosyltransferase # Organism: Clostridium acetobutylicum # 2 479 13 487 493 501 51.0 1e-141 MRNLTLLTDFYELTMMQGYFKSGKSQDRVIFDMYYRKNPCGNGFSICCGLEQVVEYIRNL NFNEEDIDYLRSLKIFDEDFIDYLRGFHFTGDIYAIPEGTAVFPREPLVKVIAPVIEAQL IESALLNIINHQSLIATKASRVVHAAAGDSVMEFGLRRAQGPDAGIYGARAAIIAGCIGT SNVFAGKKFGVPVMGTHAHSWIMSFPTELEAFITYGRLYPESCILLVDTYDTLKSGVKNA IRCFDTLKAEGIKLKRYGIRMDSGDLAYLSKKAKKMLDEAGYTEAVISASNDLDEDLISS LKLQGATINSWGVGTKLITSENQPSFGGVYKLAAIMGENGEWIPKIKLSENSEKITNPGD KQVYRIVQKESGKVFADYICLAEEKFSTDEDLTLFDPVETWKKSTLEGGSYTMEPLLQPI FEGGKLVYTCPSVEEITEHAKRELDRLWDECKRLKNPHNVHVDLSDKLYEMKIKLLEEYR >gi|333758476|gb|AFIH01000001.1| GENE 1120 1101071 - 1104316 3214 1081 aa, chain + ## HITS:1 COG:CAC3038 KEGG:ns NR:ns ## COG: CAC3038 COG0060 # Protein_GI_number: 15896289 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Isoleucyl-tRNA synthetase # Organism: Clostridium acetobutylicum # 1 1081 1 1033 1035 1140 52.0 0 MFKKVDTNMNFVEREREVEEFWKREDIFKKSIEEHKGDQSYVFYDGPPTANGKPHIGHVE TRAFKDMIPRYHAMKGNMVPRKAGWDTHGLPVELEIEKEIGINGKEQIEAYGVAPFIDLC KKNVWKYKGMWEDFSYKVGFWADMEDPYVTYHDDFIESEWWALKEIWKKKLLYKGFKVVP YCPRCGTPLSSHEVAQGYKELTERSAVVRFKIKGEEGYFLAWTTTPWTLPSNVALCVHPD LDYAKVKASDGNLYILAVARLDAVLSGLAKEGEEAYSVLETCKGKDLVGLSYEPLYAGAE KEAEKQHKKACVVVSDYYVSADDGTGIVHIAPAFGEDDGRIGRENDLALVKFVDSEGKLT EETPFFGMRCKPTEKEVMEGAISADPEVLKDLDKRGLLFDAPKMTHSYPHCWRCGTPLIY YARESWFIKMSAVKDELVANNNTVNWIPESIGKGRFGDWIENVQDWSLSRDRYWGTPLNI WECEGCGHQDAVGSISELRERAENYQEVLNKLKAEGDKGYSSDHVGYEHIELHKPYVDML TLSCPHCGKKMKRVPEVIDCWFDSGAMPYAQHHYPFENKELFESQFPAQFICEAVDQTRG WFYSLLAESTLLFHKAPFENVLVLGHVQDENGQKMSKSKGNAVDPMEALQKHGADAIRWF FYTNSAPWLPNRFHDGAVVEGQRKFLSTLWNSYAFFVLYANIDDFDPTKYSLHYESLSPM DKWLLSKLNTLIATVDNNLAQFKIPEAANALEEFCDELSNWYVRRSRERFWAKGMEEDKV NAYMTLYETLVTFAKLAAPLVPFITESIYRNLVCSVDASAPKSVHLCAYPVSNPAYIIKD LEENMDEVLALVKLGRAAREKAQVKNRQPLSIMYISGGKALEKQYESIVREELNLKAIEF KEDLSDFTAYIFKPQLKTVGPKYGKHLQEIRTYLTELDSKTGIKALEEGAIRFTAKDGTA VELSREDLLIESTKKDGFITEEDGKYTVVLDTNLSEELKEEGFLREIISKVQTMRKEAGF EVMDRIHLSAKGNEKLIALMQKFEKELCKTVLADTLSFGELRGYVKDWDINGEELSLSVE K >gi|333758476|gb|AFIH01000001.1| GENE 1121 1104350 - 1106803 2698 817 aa, chain + ## HITS:1 COG:BH1084 KEGG:ns NR:ns ## COG: BH1084 COG0058 # Protein_GI_number: 15613647 # Func_class: G Carbohydrate transport and metabolism # Function: Glucan phosphorylase # Organism: Bacillus halodurans # 9 817 8 808 815 776 49.0 0 MQKFDKAMLKKEIENNARKLFRRELTELNEKEAFHAVAAAIQNQIIDDWILTTKRAEEED RKRVYYLSMEFLMGRALGNNILNLSAHEEIKEVLEELGLNLSALEDAEPDWALGNGGLGR LAACFLDSLATLGYWACGCGIRYKYGFFKQQIVDGYQKEVADDWLKDGNPFEIRRAELAK EVRFGGWVETVQEADGRLRFIQKGYQSVEAIPYDTPVVGYNNHIVDTLRVWDANAKETFS LDEFDKGNYQKAVESANMAKNIVEVLYPNDNHYAGKELRLRQQYFFISASVQTAVEYYAR KHNGDVRNLPEKVAFQLNDTHPTVAVAELMRVLMDDYQLSWDEAWEITVKTCAYTNHTIM AEALEKWPIELFSKLLPRIYQIVEEINRRFCEEVRRKYPDRAEAKIAKMAIIYDGQVKMA HLAIIGGHAVNGVAALHTEILEKQELKDFYEMYPEKFSNKTNGITQRRWLLHANPELAEW VTNKIGDQWITDLPQIEKLAVYAEDKKAQAEFMAIKRHNKERLARYVFEHNGIKLNVDSI FDVMVKRLHEYKRQLMNILHVMYLYNQIKDHPEKDFYPHTFIFGAKAAAGYKTAKLTIKL INNVAEVINNDASIRDKIKVVFVEDYKVSSAEVIIPAADFSEQISTASKEASGTSNMKLM LNGALTIGTMDGANVEIVKEVGAENAFIFGMSSDEVIQLEQNRSYNPMDIFNNDQEIRRV LMQLVNGFYSPEDPELFRPLYNSLLNTKESDVADRYFILKDLRSYIKAQEEAVKQFQNRD WWAKAAILNTSHAGKFSSDRTIEEYVRDIWHLDKITL >gi|333758476|gb|AFIH01000001.1| GENE 1122 1106814 - 1107542 491 242 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227872777|ref|ZP_03991097.1| ## NR: gi|227872777|ref|ZP_03991097.1| hypothetical protein HMPREF6123_1036 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_1036 [Oribacterium sinus F0268] # 1 238 1 240 240 285 65.0 1e-75 MEVLLQLELEAEEKQAFQDLILLCNREDGTNYDSGLDYDFFYSIRNEEKKESGIKEEYLA ILMGYKLGEQEEGQDILLCTAFVHPSMRGQGLFTMCMECLYDDFRGKKIRLMRKEKDEYF LHFPYIYTEYFLEKTLERPIAFPGERRVYPYGEVFFSPYNEKTLYLYGLMVENRFRGQGK GEEILRDCLDRGEAGVYQKVILQVDSRNRAAMRLYTKMGFQIKDLVSYYRGERKRNRDGK NI >gi|333758476|gb|AFIH01000001.1| GENE 1123 1107526 - 1107675 173 49 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MERIYKVMRNAGAASIAMGVILITIGLVTGILSIVEGSILLKRKEDLTF >gi|333758476|gb|AFIH01000001.1| GENE 1124 1107688 - 1108170 310 160 aa, chain + ## HITS:1 COG:CAC0829 KEGG:ns NR:ns ## COG: CAC0829 COG4767 # Protein_GI_number: 15894116 # Func_class: V Defense mechanisms # Function: Glycopeptide antibiotics resistance protein # Organism: Clostridium acetobutylicum # 15 140 17 143 308 82 36.0 4e-16 MRAKEMTRNRWFGVAFFALYILLLFYILFFSELNGRGLMNRDHISYNMHPFREIYRYLFY WKQIGLLNALLNLFGNIIGFVPLGFLLPSFSGRCRRYWYNTLMAGYLLSFAVEFFQLAFR AGSCDVDDIILNTLGTALGYLCFLFVQLGRSKRREKKNLR >gi|333758476|gb|AFIH01000001.1| GENE 1125 1108247 - 1108513 159 88 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGACILSGLALLLFLFCLAYSFLKKGEAGPAVAALALLSVNFSAFSLRLALPVERGEFLE KRLLYGAVGLSVLLLFIWLFFLFLGMRR >gi|333758476|gb|AFIH01000001.1| GENE 1126 1108580 - 1109383 284 267 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227872773|ref|ZP_03991093.1| ## NR: gi|227872773|ref|ZP_03991093.1| hypothetical protein HMPREF6123_1032 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_1032 [Oribacterium sinus F0268] # 1 263 80 354 369 137 37.0 8e-31 MGERLELSWERIREIPEEVNRDTRHGAFFASLSVFFLQFLKGREEENFNKESLRAVLTEC LRNCSDYLFPQDALQKMEEGDILSVLLYLSLGLVYEKEEEAVCRVLELFIELYLLLQDSS FSDRQKLKDVLYAHFYDYTGDFLEEWFIYGKGTKTGMLSIHNPLFPLIFPFKTVSPFFTE EYEEAHRNDLALILGDRLLSHLKQELEKLRKRVDFKPISKEKMQSVLLEESVLSSEPVNW SDSPHALTFNSHQIKLLKKFREEFFLC >gi|333758476|gb|AFIH01000001.1| GENE 1127 1109465 - 1110877 1212 470 aa, chain + ## HITS:1 COG:CAC1267 KEGG:ns NR:ns ## COG: CAC1267 COG1686 # Protein_GI_number: 15894549 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Clostridium acetobutylicum # 28 282 32 293 425 179 38.0 1e-44 MLFLLLLLWGVLWEAESAYAANWGSVELTAEEAVLMDADTGAVLFEKNTEEKGYPASITK VLTALVVLEHTSLDEQVSFSHDAVYNVDQGSSNAQIEAGDVLTVNDCLHALLLKSANEAA NALAEHVAGSREAFAEMMNEKAKELGCTGSHFQNPSGLFSEEQYTTAKDMGLIAIAAFHN EEFMKIEKDLRYTLSGLQRLPEGNILYMEHKMMLPESRFYDSRVVAGKTGYTRDSGNTLL TLAKEGDRRLVTVVLKDKSPYHYSDTSAMLNLGFQETEKQSLEDTEGFLEKIRAELVEKG TLTEETKLHFSSKVMLTLPKGETQEGISYLLLEDEAEKKELSEAEEKASDSGMPDAKDSA LPHIVFLLDGRKVGEANLYREQNIRVMLSEASPKTKAAFFAVTISGFTIMIAIAVFLFGG GALYGAKNFADERKRRKKWKDRRKKRLEEMKISEEEFRILLEKRKKEKKN >gi|333758476|gb|AFIH01000001.1| GENE 1128 1110778 - 1112031 714 417 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227872771|ref|ZP_03991091.1| ## NR: gi|227872771|ref|ZP_03991091.1| hypothetical protein HMPREF6123_1030 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_1030 [Oribacterium sinus F0268] # 149 328 161 342 391 107 44.0 2e-21 MEGSEKEETGRNEDFGGRIPNTSGKTEKREEELREEPYEEDQEIERERERLRRERKERRE KRQEKRKKERNKKLLLCLLLLAALFCVVFLLRGFSNLEKARPASSSNLTKELNLTIVKKI SEEEKNALMKQAEERQGLVLHFLSPDTDENKMEEQIRNFRTDILLTGDGKNAKLLSAYSE KEKTPVLFTSYLPKESMGDYSFCLGKSAEDQAVDLSFFAYNEAFRSIGILEPEGSSSALS QELSEAFQILGGTSRILQYSSMEDMKTKEAELENTGADLLFLEEYSEEGAAFLAEEHNLP VLLGEDWDRNDFPGETVLKTSSYLYGKDTLVSSPNAAEQKESVSEEESGEEGSREWDALK LATLAMEKSGKSWEDKLEGLDFQGTYGEYQLVKGGYALHGRPVFYEIAENKRVALSR >gi|333758476|gb|AFIH01000001.1| GENE 1129 1112085 - 1112912 856 275 aa, chain + ## HITS:1 COG:MTH1334 KEGG:ns NR:ns ## COG: MTH1334 COG0253 # Protein_GI_number: 15679334 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate epimerase # Organism: Methanothermobacter thermautotrophicus # 3 272 7 284 289 211 41.0 1e-54 MKFTKMEGAGNDYIYIDCFQEKVDNPKDLAIKMSDRHFGVGGDGIILIEPSDRADAFMHM FNADGSEGAMCGNGIRCTAKYLYDHGIVRPDISLIKIETKSGMKEIRYEVKDGKLFKATV DMGEVKLDSDLPEKIQIEGLDLSFVGINTGNPHAIYFLEDNPILGKNIYEIDFSRYGHSF ETHPRFPNRVNSEFIELKNRREINFRVYERGSGETLACGTGATAAVVAGNLLGKLDEEVL VHLLGGDLTIFYDKESRHAFMSGGAREVFSGIWEE >gi|333758476|gb|AFIH01000001.1| GENE 1130 1113195 - 1113830 826 211 aa, chain - ## HITS:1 COG:lin2103 KEGG:ns NR:ns ## COG: lin2103 COG0274 # Protein_GI_number: 16801169 # Func_class: F Nucleotide transport and metabolism # Function: Deoxyribose-phosphate aldolase # Organism: Listeria innocua # 1 211 1 212 223 204 56.0 7e-53 MDIAKKIDHTMLKADAGKESILRYCEEAKAHGFASVCVNTCYVPLVAKTLSGSGVKTCCV VGFPLGAMSTKAKAFEAKQAVADGADEVDMVIQIGALKDKDYDYVREDIQAVVEASKPAI VKVIIETCLLTKEEIKKASALSEEAGAHFVKTSTGFSTGGATVEDVKLMKESVSDKMKIK ASGGIRSKEFAEELLAAGADRLGVGNGLLLL >gi|333758476|gb|AFIH01000001.1| GENE 1131 1113817 - 1118319 3740 1500 aa, chain - ## HITS:1 COG:CAC2401_1 KEGG:ns NR:ns ## COG: CAC2401_1 COG1924 # Protein_GI_number: 15895667 # Func_class: I Lipid transport and metabolism # Function: Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) # Organism: Clostridium acetobutylicum # 34 718 1 663 663 798 57.0 0 MPILNCARVTDCWFYFLFKRYLLGLRKYRLGVFMTETYRLGIDIGSTTVKVAILDQENHL IFADYRRHFANIQETLADLLEEAREAHDDLSCRIVVTGSGGLNLAKHMEQPFCQEVVAVA SALKENYPMTDVAIELGGEDAKIIYFKGGIDQRMNGICAGGTGSFIDQMASLLDTDAAGL NELAKNFQMIYPIAARCGVFAKTDIQPLINEGAAREDLAASIFQAVCNQTISGLAQGKPI RGHVAFLGGPLHFMPELRNSFIRTLKLTDEEIINPENSHLYAAMGSALNAEENNAPVCLS EMIPRLRAGIQMDSEIKRMHSLFSSEEEYAEFIKRHEKAKVKRRDLKSYHGKVFFGIDAG STTTKLALISEDGELLYTFYSGNEGSPIKTAMRAVSEIKEQLPSDAEIAYSCSTGYGEAL LKSAFQLDEGEVETIAHYYAASFFEPDVDCILDIGGQDMKCIHIKDGTVDNVQLNEACSS GCGSFLETFAKSLSYSVEDFAKEALFAENPTDLGSRCTVFMNSNVKQAQKEGATVADISS GLAYSVIKNALYKVIKVTNPKDLGKHIVVQGGTFYNNAVLRALEETLGQNVVRPDIAGIM GAFGAALIAKERYYIETEKLENEILAGEEDKALLDAAGYKKTSMLSLDEILDLQYENTMS RCGLCSNKCVLTINDFGHGRKFISGNRCERGAGLPKAKSEIPNLFKYKIKRIFGYEPLSP EEAKRGEVGIPRVLNMYENYPFWAIFFKELGFRTVLSPSSNKKIYEMGIESIPSESECYP AKLVHGHIEWLINKGQKFIFYPCIPYERNETPTAGNHYNCPMVTSYAENIKNNVENLEEK SIFFMKPFLAFTNEKILTDQLTKVFVHPKQIKDSVKPAGDWTMEKIGEQFKEWNFTEKEI RNAAHLAWEELLQSRKDIEEKGEETLMWMEQTGHRGIVLAGRPYHCDPEIHHGIPELITS YNFAVLTEDSISHLAEVERPIIVTDQWMYHSRLYRAAAFTKTQENLDFIQLNSFGCGLDA VTVDQAKDILNGSDKIFTVLKIDEVNNLGAARIRIRSLLAAIRVRSEKKYRRKIRSEQYK RTLFTKDMKEEGYTILCPQMSPLHFELIEPAIRAEGYNLVVLDNDNRSAIDTGLQYVNND SCYPSIIVVGQVMEALLSGKYDLNKTAVIMSQTGGGCRASNYIGFIRRALDKAEMGHIPV ISLNANGMESTPGFKITIPLLTRALQGVVYGDLFMRLLYATRPYELQAGAAEAVHQKWKK ICQESLSKKSIPLFEFGKNVKGIIRDFDNIPLSSEEKPKVGIVGEILVKFSPLANNHIVE LLEKEGAEAVMPDLMDFLLYCFYNQNFKHENLGASWKGKALCNIAISLLESFRKTAKKEL QKSKHFTAPSEIRELASLAREYVSLGNQTGEGWFLTGEMLELLSEGVDNIVCTQPFGCLP NHIVGKGVIKELKRHNPTANIIAVDYDAGASEVNQLNRIKLMLTVAQNKIRDKEKNHGYC >gi|333758476|gb|AFIH01000001.1| GENE 1132 1118471 - 1119094 655 207 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|291166016|gb|EFE28063.1| ## NR: gi|291166016|gb|EFE28063.1| hypothetical protein HMPREF0389_01316 [Filifactor alocis ATCC 35896] # 16 207 1 192 192 295 77.0 1e-78 MQSFVLLSGKEKGEKMSDFRINFIDNWEKKEVNLSALEEALENGTSSVYRNPRLRKISAK WKKYKERGISNLYLLKELDDDGVACAYYAYSITDGVISEEMLESLRAICAEKLSSGEMRA EGSFSKPNEWWDSNPKRSIKAVESGQADSLKQYLAAELYPKGIVIDARSIKTSHAGELAC SAIAWGVTNSIFKKGAYMSTLIHNDML >gi|333758476|gb|AFIH01000001.1| GENE 1133 1119352 - 1120008 737 218 aa, chain + ## HITS:1 COG:no KEGG:Closa_0669 NR:ns ## KEGG: Closa_0669 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 175 1 171 281 148 43.0 1e-34 MSILDRLERKLGRYAVPNLMKYICAMYALGFLIQITAPEFYFYYLDLDPEAILHGHIWRI LSFLIYYPAANGFGSIFWAIIGIMVYYSIGKTLEYLWGNFRYNFFFFSGVILYNVAGILI YLLTGVSLQLNPTYMGFSIFLAYALTLPDTVFYLYFFIPIKAKYLALIETLLYLYFLAVS QSPGEKLSIVLSFANVMLFFILLNQGKRKNIFNIKNYR >gi|333758476|gb|AFIH01000001.1| GENE 1134 1120097 - 1121530 1694 477 aa, chain + ## HITS:1 COG:CAC0518 KEGG:ns NR:ns ## COG: CAC0518 COG0469 # Protein_GI_number: 15893809 # Func_class: G Carbohydrate transport and metabolism # Function: Pyruvate kinase # Organism: Clostridium acetobutylicum # 1 477 1 473 473 436 48.0 1e-122 MRRTKMVCTMGPNENDYSVMKAMAEIMDVARFNFSHGDHEEHLGRLELLRKVRKEVGRPI AALLDTKGPEIRTGLLKDGQKITLQEGEKIVLTTEEVVGTKDKIFINYDKLHEDVKPGNV ILIDDGLIGLEVETVKGVEILCKVTNGGELGERKGVNVPGVPIQLPSITDKDIEDIKFGL AEDFDFVAASFIRSADAVRQIRSLIDEAGSQMKIISKIESQEGLDNIDAIIEASDGIMLA RGDLGVEIEAKRIPQLQKEIIQKCNYHGKLVITATQMLDSMIRNPRPTRAEVTDVANAVY NGTDAVMLSGESANGKYPLEAAKTMASIVEYTEQFLDYKQFKTRMVEKTVYESIGNAMCA ASVTTASELKAAAIVASTLSGITASMISKYRPITPIYALSPSQVVTRQMMLFWGVTPIWA RRAETTDELFESSIEELKDRKLLKSKDICVITAGVLSRLHRKQAPTGTNIMRVMEVD >gi|333758476|gb|AFIH01000001.1| GENE 1135 1121711 - 1123018 1154 435 aa, chain + ## HITS:1 COG:L0121 KEGG:ns NR:ns ## COG: L0121 COG0019 # Protein_GI_number: 15673266 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate decarboxylase # Organism: Lactococcus lactis # 11 422 1 413 419 558 62.0 1e-159 MCRESTKEKKMKKAFVDYRKAKEIAETYPTPFYLYDEEGIRETVRNLYKAFSWNEGYREY FAIKATPNPSILRILKEEGCGVDCSSDVELSLAEACGFSGSEIMFSSNDTPDEEYVFANR LHGIINLDDFSNIEEVSEILGVLPKTMSLRFNPGGYFSIGNTIMDNPEEAKYGMTEAQIL EGYRILKDRGVEHFGIHAFLASNTISNDYYPELARQLFSLVVKIKEECGISLEFVNLSGG VGIPYRPEQEATDIFLIGEKVREVYEEILVKNGLGHIRLCSELGRYVLGPHGALITKVIH FKNTYRHYAGVDACASNLMRPAIYDAYHHITVLGKEDAKETEVYDVVGSLCENNDKFAKG RELPKLEKGDLLFIHDTGAHGFAMGYNYNGKLWSSELLLQKDGTVKMIRRAEKDTDYFAT LDIDEGLSNYLQSRK >gi|333758476|gb|AFIH01000001.1| GENE 1136 1123052 - 1124371 1088 439 aa, chain + ## HITS:1 COG:APE0662 KEGG:ns NR:ns ## COG: APE0662 COG0124 # Protein_GI_number: 14600873 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Histidyl-tRNA synthetase # Organism: Aeropyrum pernix # 30 368 14 332 438 173 37.0 6e-43 MLWLYAWYWVSDIEKVKRGSMALKKKAVTGMKDILPREMAVRQRVLSTIRKVYGRFGFTE IETPIVEHLSNLLSKQGGDNEKLIFKVEKRGEKLKEALEKGDFENLSDSGLRYDLTLPLS RFYAENQGSLPSPFKALQIGPVFRADRPQKGRFREFWQCDIDIFGDASYLSEIDLLLAMG TVLQEIGFGEKYPFYIVLNDRAILKAMQSYAGFPEEDFSEISIVLDKEDKIGREGVREEL LSLSYTKEQISRYEDCLYLVKGDKEDILKLQEKLGAHLDEEVGKNLYRIMKMVEESGKGA IPLRFDPTLVRGMGYYTGPIFEVRSTLFSGSIGGGGRYDKMVGKFIGVDTPAVGFSIGFE RIIGILLEGEENTHSEGKIAYLVEKKVSEEKLSACLSEVMERRARGETVLLTQMNKNKKF QKEKLSSEGYNEFVEIYGD >gi|333758476|gb|AFIH01000001.1| GENE 1137 1124549 - 1126354 1862 601 aa, chain + ## HITS:1 COG:CAC2269 KEGG:ns NR:ns ## COG: CAC2269 COG0173 # Protein_GI_number: 15895537 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aspartyl-tRNA synthetase # Organism: Clostridium acetobutylicum # 1 599 1 595 595 667 55.0 0 MAESMKGLHRTARCAELGESYIGKTVCMMGWVQKSRNKGGLIFTDLRDRSGILQILFEEQ ECGKEVFEKASELRQEYVIAVEGEVRSRGKDSNAALSTGSIELVAKSLRILAEAETPPFP IEADSKTKEDLRLKYRYLDLRRPDLAKKIMTRARLSQLIRHFLSEEGFLEIETPTLIKST PEGARDFLVPSRLHRGAFYALPQSPQLLKQLLMVSGMDRYFQLARCYRDEDLRADRQPEF TQVDMELSFVDIEDVLEVNERLLKYIFKEVCNVDIALPLQRMTWDYAMNHYGSDKPDLRF DMPLIELTEAVKDCGFSVFSDCAKAGGTVKGILVKGQAEMPRKKLDSYVELVKGYHAKGL AWYGVHEDGTVKSSFAKFLSEEDAKRLVEASGFEKGDLLLLVSDLKRNVVWDSLGALRLA LGKELDLIDKTQWKFLWVTEFPMFEYSEELGRYQAMHHPFTMPMEEDLHYLDTDLSKIRA KAYDIVLNGTELGGGSVRIHQSDVQEKMLEKLGFTPERANEQFGFLMQAFRYGVPPHAGL AYGLDRLAMWMVGAETIRDVIAFPKGKDGSDAMMDAPAEVFDPQQLLDLNIAVIAEEEKS E >gi|333758476|gb|AFIH01000001.1| GENE 1138 1126347 - 1126994 409 215 aa, chain + ## HITS:1 COG:no KEGG:Closa_0686 NR:ns ## KEGG: Closa_0686 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 95 1 96 157 74 42.0 2e-12 MNKKEFLQALRGELINSVSGQIIEEQLRFYSEYIDTEVGKGRGEEEVVAELSAPNLLARS IIEAADAGGDRVARTTPFRYEEKDINYASDEEDLRYQGTASEKDRFDSETESLRYERRES SSNGSGNYSRNTAYGDSGNGGYGNSSYGNNRESHGYRPYIPVSSTGCLLFTIVVIALLVL VVLVFVGILSFLAPILFPVLCIAVILWLLSGILNR >gi|333758476|gb|AFIH01000001.1| GENE 1139 1127108 - 1128262 891 384 aa, chain + ## HITS:1 COG:lin2000 KEGG:ns NR:ns ## COG: lin2000 COG0116 # Protein_GI_number: 16801066 # Func_class: L Replication, recombination and repair # Function: Predicted N6-adenine-specific DNA methylase # Organism: Listeria innocua # 1 383 1 372 382 333 46.0 3e-91 MQRFELIVPCHFGLESICKKEIHDLGYEVSSVSDGKVQFIGDAEAIVRANIFLRTGERVL LKVGSFHAESYEDLFQGTKALPLEDFLPVDASFWVTKASSVKSKLFSPRDIQAVMKKAMV DRLASIYHQTTFSEHGAKYPFRVSLYKDEVLVCLDTSGESLHKRGYRLKMGKAPIKETLA AALILLSKWRDDAPFVDPMCGAGTFPIEAAMIAANIAPGMERSFTAEEWANLIPKKEWYS ALEEAEDNIDRHLLETKENSFGKMVDIQGYDIDPAMIPVCRENAERAGVANLIHFQEREV AKLSHSKKHGYILTNPPYGERIEDKRNLPLLYTELREAFEGLSEWQLCLITAYEQAEKYL GKADKNRKIYNGMMKTYFYQYKGK >gi|333758476|gb|AFIH01000001.1| GENE 1140 1128272 - 1129465 1048 397 aa, chain + ## HITS:1 COG:CAC2665 KEGG:ns NR:ns ## COG: CAC2665 COG0127 # Protein_GI_number: 15895923 # Func_class: F Nucleotide transport and metabolism # Function: Xanthosine triphosphate pyrophosphatase # Organism: Clostridium acetobutylicum # 2 202 3 196 201 145 40.0 1e-34 MRIIFATHNEDKLREIREIMREFPGEIKSKKEIGELGDVVENGSSFLENAEIKARDLYEK LKGKGLLQDGDIVMADDSGLSIEALSYGPGIYSARFLGENTAYSEKNKRILAMLKEASNK SRYAYYTCAIVAILSDGKTLKTEARCEGEIAEEIRGEGGFGYDPIFFIPECGKMAAELSE EEKNRVSHRGKALRKMVRILKEESAHLEGKQASEDKKEGKPKDDSKKAQETVSEEEKKIL VVSDNHRKLETLFQLIDANPDISCFLHLGDSEGGEEEIRARLPKKCDSYFVQGNNDFFAY LPKEAEIRLGKERLFLTHGHLYGVNFDLQRLADEAKDRNCSMALFGHTHKPCQRTVNGVL CINPGSISFPRQDNRRQSYAMFYLDKKGNLRTELRYI >gi|333758476|gb|AFIH01000001.1| GENE 1141 1130271 - 1130972 855 233 aa, chain + ## HITS:1 COG:SA1940 KEGG:ns NR:ns ## COG: SA1940 COG0813 # Protein_GI_number: 15927712 # Func_class: F Nucleotide transport and metabolism # Function: Purine-nucleoside phosphorylase # Organism: Staphylococcus aureus N315 # 2 233 4 235 236 281 58.0 7e-76 MGTAHNKAEVGDIAKTVLMPGDPLRAKYIAETYLTEVKCFNSVRNMLGFTGKYNGKEISV MGSGMGMPSIGIYSYELYQFYNVESIIRIGSAGALHEDIDLKDLVFAQGACTDSRFAYQY ELPGSFAPIADFSLLEKAVSEARALGTRFKVGNVVSSDIFYNVYPEAAKKWAGMGVLCVE MEAAALYMNAAKLHKKALAILSISDHILKGTELSPEERQTGFSEMMEIALKLA >gi|333758476|gb|AFIH01000001.1| GENE 1142 1131002 - 1131778 833 258 aa, chain + ## HITS:1 COG:SPy1869 KEGG:ns NR:ns ## COG: SPy1869 COG2820 # Protein_GI_number: 15675688 # Func_class: F Nucleotide transport and metabolism # Function: Uridine phosphorylase # Organism: Streptococcus pyogenes M1 GAS # 1 256 1 257 259 335 63.0 6e-92 MINYSEDDRCYHIGVRPGEVGKYIILPGDPKRCAKIAQYFDNPVQVADNREYITITGTLL GEKVSVCSTGIGGPSASIALEELSQCGGEAFVRVGTAGGMDLAVESGDLVIAESAVRMEG TSREYAPQEWPATADFFVTKELYEAAERLGFRNHVGVVQCKDAFYGQHKPEDLPVSGELL EKWQAWLKLGCKASEMESAALFTVGAYLKKKIGTVLFIVSNQERVKAGLSNPIYHDTDKA IQVAVEAIKEMIRKERKG >gi|333758476|gb|AFIH01000001.1| GENE 1143 1131837 - 1133033 911 398 aa, chain + ## HITS:1 COG:BS_drm KEGG:ns NR:ns ## COG: BS_drm COG1015 # Protein_GI_number: 16079407 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphopentomutase # Organism: Bacillus subtilis # 2 394 5 391 394 432 56.0 1e-121 MKFKRVFLIVLDSLGIGNGRDAAHFGDSGSDTWGHIAEKMENFSIPNLQKMGIGNFKKLK GVSPVEHPTAKFFRLNEASSGKDTMTGHWEMMGIKTEIPFVTFTETGFPKELIDELERRT GRKVIGNKSASGTAILDELGEEQIKTGAMIVYTSADSVLQIAAPEDERYFGLQELYRCCE IAREICMKPEWKVGRIIARPYVGEKAGEFKRTANRHDLAVKPPQDTVLNALEKAGFTVFS IGKIADIFDNEGITEAEHSKSSVHGMEQCIAAAENKDFKGLCFVNLVDFDAIYGHRRDPV GYGEEIQRFDEKLGKLLSVIKEDDLVLLTADHGNDPTFSGTDHTREQVPLIAYYKGIKSG EGKEQESFGVIGASIAENFSVKMPDGLVGESVLSEIIN >gi|333758476|gb|AFIH01000001.1| GENE 1144 1133073 - 1133570 380 165 aa, chain + ## HITS:1 COG:lin2867 KEGG:ns NR:ns ## COG: lin2867 COG0590 # Protein_GI_number: 16801927 # Func_class: F Nucleotide transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: Cytosine/adenosine deaminases # Organism: Listeria innocua # 1 165 7 152 154 135 44.0 3e-32 MALALELAKQAAENGDVPIGAVIVYDGLKEDSPMGRLCKEKGIQTGDILGTGFNQRNLLG NALSHAEILAIEEACKKIGDWRLEDCTLYVNLEPCPMCAGAILQARIPRLQMAIRNPKAG FCGSVMNILQMKELNHRVEISEGLESEEARALLQGFFIKLRLKEE >gi|333758476|gb|AFIH01000001.1| GENE 1145 1133601 - 1134362 606 253 aa, chain + ## HITS:1 COG:CAC1731 KEGG:ns NR:ns ## COG: CAC1731 COG1564 # Protein_GI_number: 15895008 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine pyrophosphokinase # Organism: Clostridium acetobutylicum # 28 246 21 206 211 70 27.0 4e-12 MREVFAKQKEKRAILIAAGSFYGLPFSVTESDLVIAIDGGMKYCEEEGIKPDLLLGDFDS YPFGEEGVLLSSADPKNLSDGAIGQEQEQYVIFGQSSLTRKDYNSAVIRLPRIKNETDLH AAIQVALEQGVREIHIFGGLGGSRMDHSYAALQSLAYLTASGAEGYLYGEKQVFTALKNG TKTFSKEYKGYFSAFSFTEESKGVTEKGFKYLVENVSLFSTEPVGVSNEFIGKEAEISVE NGILILCYEVLQA >gi|333758476|gb|AFIH01000001.1| GENE 1146 1134803 - 1136047 971 414 aa, chain + ## HITS:1 COG:FN0345 KEGG:ns NR:ns ## COG: FN0345 COG0628 # Protein_GI_number: 19703688 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Fusobacterium nucleatum # 196 372 139 315 331 120 35.0 4e-27 MKHEEWKEQIKWGLTAFSVLAAVSLVYIVASNFYLVEQNFAIFLQILMPIIYGAVLAYLM SPVYNVVVSVLGKAYHSLFRKEASHRFLGFFGTVASLLFLFLLTSGLVSMLIPELTKSVL SLYFSLPDTINRSYNNLTVILEKFPDIRPYVEKTYEEVSRFFVGTTDSTQTIFSHLQNLA TFFTNGIWSTLTIVKNILIGLIVMVYLLNMKDLLRRQFRKLLFALFSRKKAKEIIEELQY VHRVFGGFILGKIIDSAIIGVITFFVLSIMKMPYTLLVSVIVGVTNVIPFFGPFIGAIPC FFLILLTSPVQSLYFAITILIIQQIDGNIIGPKVLGDSTGLSSFWVLFSILLFGGLFGFV GMIIAVPFWAVILNTLRRSADKRLRKKALPVSSAEYEDFEKMAKEVSPEKVHGE >gi|333758476|gb|AFIH01000001.1| GENE 1147 1136244 - 1136792 655 182 aa, chain + ## HITS:1 COG:CAC3537 KEGG:ns NR:ns ## COG: CAC3537 COG0653 # Protein_GI_number: 15896773 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecA (ATPase, RNA helicase) # Organism: Clostridium acetobutylicum # 22 167 20 163 166 120 45.0 2e-27 MATLLENWRNAAYGNGLNKNEQEALWQKYFTLEKGFYEKVLSDPKKVYEGSVKELAEQFG IEEFIFVGILDGIDESLAGFHNPIDSMDENTTVKIQVDPEKLYYNMVEAKASWLYDLPQW NDILSEERRKELYKEQKKSGTVRREGKKIYPNDLCHCGSGKKYKKCCMRKDEEREKELSA NE >gi|333758476|gb|AFIH01000001.1| GENE 1148 1136785 - 1137663 828 292 aa, chain + ## HITS:1 COG:CAC2370 KEGG:ns NR:ns ## COG: CAC2370 COG1281 # Protein_GI_number: 15895637 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Disulfide bond chaperones of the HSP33 family # Organism: Clostridium acetobutylicum # 5 292 3 292 297 258 45.0 8e-69 MSSRDYLLRATAAEGQIRAFVCSTRDTAEEQRKLHNTSPIATAAIGRLMSAALMMGVDLK GEKDLITLSVKGDGPMKSLVATADSHGTVKATCANPYVILPAKANGHLDVGGAVGKGFLS VIRDNGLGEPYVGQTQLLSGEIAEDVNAYFSISEQIPSSVGLGVLLNKENTVEASGGFII QLLPFAEESLLDKLEEKLKTVHSVTDLLKDGHTPESLLDFLLGDFSPEIHEKRELSYFCN CSRERVEKALISLGKKEIESLISDHKAQEVRCDFCNKRYIFTEAELEALLKR >gi|333758476|gb|AFIH01000001.1| GENE 1149 1137796 - 1137993 273 65 aa, chain + ## HITS:1 COG:BH3610 KEGG:ns NR:ns ## COG: BH3610 COG1278 # Protein_GI_number: 15616172 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Bacillus halodurans # 1 65 1 65 65 84 60.0 4e-17 MKGTVKWFNNQKGYGFISDETGKDVFVHYSGLSGEGYRSLEEGQAVEFEVVDGAKGPQAT NVVKL >gi|333758476|gb|AFIH01000001.1| GENE 1150 1138290 - 1138802 478 170 aa, chain + ## HITS:1 COG:lin2789 KEGG:ns NR:ns ## COG: lin2789 COG4769 # Protein_GI_number: 16801850 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 6 161 5 163 180 85 38.0 3e-17 MDKGTKKLTAYAMLLALSMILGYLESMIPTPFPIPGIKLGLANIVNIIGLFSLGILPTGI ISFLRVLLLSMLFGNLMTLSYSMAGFFLSFFVMILAKQCFKLSFISVSLLGGIFHNIGQI LMAAFLLRNPVLFAYLPLLLLAGTAAGIVMGVLASIVAKRLGKFFRELRG >gi|333758476|gb|AFIH01000001.1| GENE 1151 1138973 - 1141819 2654 948 aa, chain + ## HITS:1 COG:CAC0503 KEGG:ns NR:ns ## COG: CAC0503 COG0178 # Protein_GI_number: 15893794 # Func_class: L Replication, recombination and repair # Function: Excinuclease ATPase subunit # Organism: Clostridium acetobutylicum # 9 947 2 939 939 1210 63.0 0 MEKGQILEKKWIKIRGANEHNLKHVNLDIPRDSLVVLTGLSGSGKSSLAFDTIYAEGQRR YMESLSSYARQFLGQMEKPDVELIEGLSPAISIDQKSTNRNPRSTVGTVTEIYDYMRLLY ARVGVPHCPVCGREIKKQTVDEMVDLLMKKEEGTKMQLFAPVVRGKKGMHEKLLQSLRRS GYVRVRIDGNLYELEEEISLEKNIKHTIEVLVDRLVVRKGIEKRLTDSIEQVLSLSNGLL LVDFLNGEELQLSTNFACPFDGTSIEEIEPRSFSFNNPFGACPTCFGIGYKMEFDVKLMI PDESLSLNEGAISVLGWMNSKDEGSFTHAMLVAMSEKYGFSLDTPFQELSEKAKDLIING TKGERVTVHYQSQYGKGAVHQVAFEGLLANIERRYKECFSEKMKIEYEQFMRITPCPSCH GARLKPSSLGVTVGEKNIHEATMLSMDEFFDWINSIRLKPMEAKIAEQILREIKARSRFM LDVGLNYLSLARSAGTLSGGESQRIRLATQIGSGLVGVAYILDEPSIGLHQRDNDKLIAT LKRLRDLGNSVIVVEHDEDTMREADMIVDIGPGAGEHGGEVVAVGTAEEIIQNPASITGQ YLSGKKKIPLPKSRRPHTHTLDVFGAEENNLKNIDVQIPLSVFTCVTGVSGSGKSSLVNE IVHKYCAKTLNKARLVPGKFRKITGTEYLDKVIDIDQSPIGRTPRSNPATYTGVFDLIRD LFASSKDAKERGYNKGRFSFNVKGGRCEACSGDGIVKIEMHFLPDVYVPCEVCGGKRYNR ETLEVKYKGKSIYDVLNMTVEEALTFFENIPSISRKMQTLMDVGLSYIRLGQPSTELSGG EAQRIKLASELSRRGTGKTLYILDEPTTGLHFEDVRKLVEMLQRLADGGNTVLVIEHNLD VIKCADYLIDMGPEGGAGGGTVLCTGTPEEVAKNPKSYTGQYLQKYLQ >gi|333758476|gb|AFIH01000001.1| GENE 1152 1141914 - 1142333 454 139 aa, chain + ## HITS:1 COG:BH1189 KEGG:ns NR:ns ## COG: BH1189 COG0537 # Protein_GI_number: 15613752 # Func_class: F Nucleotide transport and metabolism; G Carbohydrate transport and metabolism; R General function prediction only # Function: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases # Organism: Bacillus halodurans # 4 137 6 142 142 115 40.0 3e-26 MSADCIFCKIANGEIPAKTIYEDADFRVILDIAPGTPGHALILPKSHGEDLFSLDDAVLQ KVFPLAKRMAKAIMKATGAKGCNIVQNNGEVAGQTVHHFHVHIIPRFGTEGNIVSWNPSE YADGEMEVLQEKMVKELHG >gi|333758476|gb|AFIH01000001.1| GENE 1153 1142326 - 1143402 921 358 aa, chain + ## HITS:1 COG:CAC2231 KEGG:ns NR:ns ## COG: CAC2231 COG0707 # Protein_GI_number: 15895499 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase # Organism: Clostridium acetobutylicum # 3 350 5 351 359 384 54.0 1e-106 MAKILLTGGGTAGHVTANLALLGELREKHTIYYMGSKDGIEKELAEKVGLPYFGISTGKL RRYFSLRNLTDPFRVISGFFQARKQIKAWNINLVFSKGGFVAVPVIFAAASLGIPIICHE SDFTPGLANKLTIPFTKKICCNFQETVSLLPKGKAVCTGAPIREELLQGSREEGLRLCGF SGEKPVLMVIGGSLGSVAINTAVRENLRKLGENYDIIHICGKKNEDKSLSDLAYYRQFPY VNQELADLYQAADFVISRAGANVIYEILALKKPNILIPLPKKASRGDQILNAESFSAQGF SIVLPQEELEENPSVLLDCLEKLHEDKEKYIKAMETSRERDGRKNVLAVIQSVLDSKS >gi|333758476|gb|AFIH01000001.1| GENE 1154 1143424 - 1144116 869 230 aa, chain + ## HITS:1 COG:CAC2117 KEGG:ns NR:ns ## COG: CAC2117 COG0775 # Protein_GI_number: 15895386 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside phosphorylase # Organism: Clostridium acetobutylicum # 2 219 3 219 230 179 43.0 4e-45 MIGIIGAMEEEVAHLVKLCEEREEIVQGPYHFYKGRLSGKDVVLVRAGVGKCNAAACTQA LIDRFHPSYIFNTGIAGAISPEVHILDLVISRDALQYDVDVTRFDYPLGKVPGDEKVGYD ADARLLELAVEVNQEINPEHNSYIGRVVTGDRFVSSHETKEYLKKTFDAACCEMEGAAIA QIATKNGVPFVILRFISDEANNEASMVYEEFEAKAIEKTVDFMLEFLRRV >gi|333758476|gb|AFIH01000001.1| GENE 1155 1144364 - 1145701 1684 445 aa, chain + ## HITS:1 COG:BH3343 KEGG:ns NR:ns ## COG: BH3343 COG0166 # Protein_GI_number: 15615905 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-phosphate isomerase # Organism: Bacillus halodurans # 4 445 7 448 450 561 61.0 1e-160 MLKLDLSKARQFVSEEEMANFKAQTLLAKEILLKGSGAGNDFLGWVDLPENYDKEEFKRI QAAAKKIQEDSDVLLVIGIGGSYLGARAANEFLNHSFYNELPKEERKTPEIYYVGNNISS KYISDLKQVLKGKDFSVNIISKSGTTTEPAIAFRVFKAMLEEKYGKEGAAKRIYATTDKA RGALKSLADEMGYEEFVVPDDVGGRYSVLTAVGLLPIAVTEANICELMEGAASMRKALLE QDYEVNPALQYAAARNIMLRKDKKIEIFVNYEPSCHYISEWWKQLYGESEGKDQRGIFPA SVDFTTDLHSMGQFIQEGARLHFETVLEVMESAAELVLEKEEIDTDGMNYLAGKTVDFVN KAAMQGTILAHTDGNVPNFLLQIDKQCERTLGELFYFFEFACGVSAYINGVNPFNQPGVE SYKRNMFALLGKPGYEELAKELAKK >gi|333758476|gb|AFIH01000001.1| GENE 1156 1145855 - 1146118 275 87 aa, chain - ## HITS:1 COG:no KEGG:Cphy_0044 NR:ns ## KEGG: Cphy_0044 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 1 87 1 88 89 80 44.0 3e-14 MFRLSGQILKNGKVMASCVSRQEGAENRTKKVYTALEEICHHFDLPVPIWLPTRIREFQT RSKTTFLSDSFMEEIYFDGLEIQVIEE >gi|333758476|gb|AFIH01000001.1| GENE 1157 1146412 - 1147512 1074 366 aa, chain + ## HITS:1 COG:no KEGG:Closa_0068 NR:ns ## KEGG: Closa_0068 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 46 354 46 353 363 182 35.0 3e-44 MGLETENPKLFLEQAKAELENYHGIQDRLQESLAKEKDAKQAFEKDRAAVTEKIEKTIKD RQKELEQSYDQKISQSSGKIKKAQSERDAAKNKGIKERIADESAPLKQENIELKRQMQGI CKREGAPLFIASKFFAVLYKPVSFVEVLILILLFLLIFAALPLGLYFFLLKSKGILFLAG IYLLDILLFGGLYVFVGNRTVGKYREVVKQSIAIRKRILRNKKSMKALAREIRKDSDEGH YNLTEYDDELACLTQERNDFIAQKQNALHNFETVSQEIIRDEIENAEREGLEALKAEWQR NTEERISLEAAERETTLKLSKEFEQYIGNKHMNVEDLQAMIQILEEGKAQSLTETILKLE EGDKTL >gi|333758476|gb|AFIH01000001.1| GENE 1158 1147857 - 1149086 1038 409 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149002994|ref|ZP_01827905.1| 50S ribosomal protein L33 [Streptococcus pneumoniae SP14-BS69] # 4 409 6 408 409 404 52 1e-111 MSNIHVTSEIKKLKKVLLHRPGDELLNLTPDTLGELLFDDIPDLAEAQLEHDRFANILRD NGVEVVYLEDLMAETLKARPEIKEQFLDQWITESGVHTEVYHKIIKNYLEKFKDEKELVL KTMAGITFAELGEIHTNFLVDRIATASHLLVNPMPNLYFTRDPFASVGNGAVINRMFSVT RNRETIYADYIFKYHPDYAGNVPDLYGRNNYFHIEGGDVLNVNEKLLFIGMSQRTQPEAI QELAMKMFYENEGNKIETILAFNIPVSRAFMHLDTVFTQIDTDAFTIHPGIMGTLQVFAI TKDAAKHDVKIEEHTGKLEDILAKFMGLPKVRLFPCGAGDALAAEREQWNDGSNTLCIAP GTVIVYKRNYVTNKYLKENGFNVLELEASNLCVGRGGPRCMSMPLVRED >gi|333758476|gb|AFIH01000001.1| GENE 1159 1149120 - 1150112 986 330 aa, chain + ## HITS:1 COG:SA1012 KEGG:ns NR:ns ## COG: SA1012 COG0078 # Protein_GI_number: 15926752 # Func_class: E Amino acid transport and metabolism # Function: Ornithine carbamoyltransferase # Organism: Staphylococcus aureus N315 # 4 329 3 330 333 394 58.0 1e-109 MGVNVRGRSFLTLLDFTPDEIRYFLELSAEFKRLKANGVDHSYLKGKQVVLLFEKTSTRT RCAFEVGARDLGMGVTFLDSGSSQMGKKESLEDTAKVLGRMYDGIEYRGFDQKVVEDLAK YSGVPVWNGLTDLYHPTQMLADILTVKEEFGDVRGRKLTFFGDARNNVANSLMVVCAKLG MHFCACGPKELMPTDDLVAKCREVAKDTGAEIELTDDIKIGAKDADVLYTDIWLSMGEPA ELWEKRIKLLRPYQVNKELMAMAKPTAIFLHCLPSFHDRNTTVGEDIYQKYGLEAMEVTD DVFLGKHARQFHEAENRMHTIKAVMYATLK >gi|333758476|gb|AFIH01000001.1| GENE 1160 1150122 - 1151060 938 312 aa, chain + ## HITS:1 COG:SA1013 KEGG:ns NR:ns ## COG: SA1013 COG0549 # Protein_GI_number: 15926753 # Func_class: E Amino acid transport and metabolism # Function: Carbamate kinase # Organism: Staphylococcus aureus N315 # 4 312 3 310 310 337 55.0 2e-92 MAKRIVVALGGNALGNTPEEQLDLVRHTAKTIVDLSEAGYEVIVGHGNGPQVGMINLAME FSSTKGGNTPYMPFPECGAMSQGYIGYHLQQAIQKELKARHIDKECASVITQVVVDEKDP GFAKPTKPVGSFYTKEEADKIAAEKGFTFVEDAGRGYRRVVPSPIPQRIVELKVVEQLVK AGDIVITVGGGGIPVVETADGLKGVAAVIDKDRSSALLAQDIGADMLIILTAVDRVCINY NKPDQKELPTMNLAEAEQYIAEKQFAPGSMLPKVQSCMEFVKNNTNGGTALITSLQKAAL ALKGETGTIITK >gi|333758476|gb|AFIH01000001.1| GENE 1161 1151083 - 1152588 1886 501 aa, chain + ## HITS:1 COG:STM4464 KEGG:ns NR:ns ## COG: STM4464 COG1288 # Protein_GI_number: 16767709 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 9 499 8 467 467 258 37.0 2e-68 MKAKKQSLTAFSILFIILAVLCIISVLLNGQPISNDIISGLNPDKYGDLVKTVADGGTVT VVGAKLNNFFMAYPNGFVNAADLIVFIVSIGGFIGVVMKTGALEAGVYHLVKKMHGKEEV LIVILMVLFSIGGSTYGMAEETIGFYALITTALVAAGFDTIVAVATVLLGAGCGVLGSTI NPFATGAATSALQSVNVPYSSTTIMVLGFALWVTSLLIAIIFVLSYAKKVKADKGSTILS LQEQQDMKDHFMKEDGQTLEFTGKHKAVLIVFAISFAVMIASLISYQDITFGGNEDAYLA ALGWSDFLTGVPLGQWYFAELAAWFTFAAVLVGIMARMSENELINTYLDGAKDLLSVALV IAVARGITVVMQATHMDFWILDKSAAILKGVPGFVFAPLSYVIYLVLSFLVPSTSGLAGF SIPVMGGLANTLGFDASVMVAVFSAGCGLINLFTPTSGVVMGGLGAAKVELKTYMKWGLK LFVAIGIANIVVLSLAMMIIK >gi|333758476|gb|AFIH01000001.1| GENE 1162 1152814 - 1154121 1158 435 aa, chain + ## HITS:1 COG:PA3215 KEGG:ns NR:ns ## COG: PA3215 COG2207 # Protein_GI_number: 15598411 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Pseudomonas aeruginosa # 212 291 251 329 337 69 42.0 1e-11 MSKKAIMQESWTSGINPVSLCSFDYEAIEKPTKAMMHQAARFMYFNKGVGKIKIDGVEYD IVPHTLCAITPWKVTDIIDVRDTLHLSLIVYDFQFMNTMLKVAPGLEVDSTSLFTFLASH PVAYLEKEQISTIYRIMSSLQNELGVDSAVMRQAEQPFTFLYTVVKILELMVEYRRCLAL TEEAVKQKNNIGIQNSILSYIYFHSAEHLTLEKVAEVFYISESSLSKRLSDLTGTTFTKL LNDIRIEKATDYLIYTGLTLEEIADILGFSDASHLSKHFVEKMGLTPNKYRKAYGKEGAV YRPGDKNIALEVTDYLYNHYDADDLLASTISEKYGISVSELNRALLYYTEMNFITLLNFV RVNKASEMLVDSNYSILDISVSVGYSNIKTFNLNFYKFKGMTPSEFRESITLQRTDQSEN KYKNKDKNKEKKNGV >gi|333758476|gb|AFIH01000001.1| GENE 1163 1154153 - 1155613 744 486 aa, chain - ## HITS:1 COG:no KEGG:Closa_0117 NR:ns ## KEGG: Closa_0117 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 267 483 402 617 620 150 40.0 1e-34 MHINPEAAIAYLSEEEKRIQEQIYFQAEKEYSSLLGDVKNSQRELSVKEREETPDLISDS ASEAKAFPSSQEEKNDKDLLENKISAILHLQKEIQTLEEFVHKEGFHSEEEVLNEESTVK QLLSESEALDGQKKQAFLFPFCLLFLSVLFLCYSLLSYLYFYTDYPISEVFAFQIRSVPM LYPAFCLGLFFGIFSFTSFVERKKRIQLEQKQNLFFREIANKRNFAAYAAFSNSSKEEVD KSAPSSLFSPYVLDKYYSEVKNNFTLLSEKRAKIEELNTDISALKEKEQKEEERKKRLEE EENVLEEKLRQIGSWQNRAEQIRPSLYDNEKLREKLEAIAEAKERIHALSEEIYQSFAFY LNKETAKILSYITGERYDSLFIDQNLRIFVNTKETMLPLEQASTGTIDQLYLSLRLAMAK LLQKERKEYLPLLFDDSFAMYDENRLAAALSFVNKAYPAQILLFTCHKREAEVLQQLDIP FHMRSL >gi|333758476|gb|AFIH01000001.1| GENE 1164 1156090 - 1157145 797 351 aa, chain - ## HITS:1 COG:no KEGG:Closa_0118 NR:ns ## KEGG: Closa_0118 # Name: not_defined # Def: metallophosphoesterase # Organism: C.saccharolyticum # Pathway: not_defined # 1 346 1 349 356 197 33.0 6e-49 MRFIHASDLHLGMIPDGQKSWGRERSNALLSSLDKIVDLALKENVDALFLLGQSFHFSPL KEDVERIRQNLSRIPFCHVFFYSKPDLSYHFLNSAIFPRNVHILKEEQEQLYIEELNLEI LSLQEKADRKKALEHFTPEHSGAIPVLLCNVSREEPFPQNPEKLQALPFSYVALGGEADK QILLADKVVFSGSPEALSKENLGEHGVFLGNLDPLQKKIDALQFIRLADTQYISLHFRLD TGVGTEMLRNRLSDEIKKRGMQHIYRIKFSGKRDPETHVGEDLLPQNSRVIEWIDESVPE YDFYNLYREHSNDLIGFYIRSYLKKGNENLSAREKDSLHYGISALLSGGKK >gi|333758476|gb|AFIH01000001.1| GENE 1165 1157160 - 1158548 1238 462 aa, chain - ## HITS:1 COG:CAC3260 KEGG:ns NR:ns ## COG: CAC3260 COG0017 # Protein_GI_number: 15896505 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aspartyl/asparaginyl-tRNA synthetases # Organism: Clostridium acetobutylicum # 1 462 1 463 463 620 63.0 1e-177 MEITGLRDIFLSKEEYLNQEVCVSGWVRSNRDSKNFGFLTISDGTFFTPLQVVYHDEMAN FGEIAKLGVGAAVIVSGKLIPTPEAKQEFELQAVEISVEGETQPDYPLQKKRHSLEYLRT IPHLRPRTNTFQAVFRIRSQIAYAIHSFFQERGFVYVHTPLITASDAEGAGEMFEVTTLP LNDVPMKDGRVDYSEDFFGKKTSLTVSGQLNGEAFAQAFRDIYTFGPTFRAEKSNTQRHA AEFWMIEPEMAFADLDDVMFIAEDMLKYIIQYVLVNAPEELEFLNQFVDKGLLERLQHIV KSDFARVSYTEAVEMLEKVNDRFEYKVKWGSDLQTEHERYLTEEIYKCPVFVTDYPKDIK SFYMKLNEDGKTVAAVDCLVPGIGEIIGGSQREDDLDKLTKRMQELNMNMEDYQFYLDLR KYGSTRHGGFGLGFERAVMYITGMSNIRDVLPFPRTVGNCEL >gi|333758476|gb|AFIH01000001.1| GENE 1166 1158880 - 1160361 1054 493 aa, chain + ## HITS:1 COG:SPy0713 KEGG:ns NR:ns ## COG: SPy0713 COG4690 # Protein_GI_number: 15674771 # Func_class: E Amino acid transport and metabolism # Function: Dipeptidase # Organism: Streptococcus pyogenes M1 GAS # 2 492 9 472 472 454 47.0 1e-127 MSCTTLLVGRNASYDGSTMIARNMDSGSGEYTPKKMLRVSGKNAPKKYKSVLSHVEIPLP EKALDYICFPDALGDKGIWAGAGTNSANVSVSATETITSNELVQAADPLVVLHKEGRKEI PGGIGEEDMTSLLLPYIHTAREGVIRLGELLEKYGTYEMNGVAFSDTKEIWWLETIGGHH FIAKKVPDDAYVMMANQQGIDSFDLEDAFGKQKEHICSKDLREFMAEHHLNLDFEGDFNP RAAFGSHSDADHVYNTPRTWYILRRLNPNTFRYEGESADFKPDSDDIPWAMVPERKITPM DVKYLLSTHFQGTAYDCYGKFGDLSRVGQIRPIGIERTSFLSLHQNKEEKCKDLECITWF TFGANVFNALIPMFSAVTKIPNYFSNTKKEVSTDSFYWQNRLIGAMADASYQKSRFHVER YQGSVQAKCYQLIEEYKKEVSKRKRGQAEITALLEECNEKIAAICKKETAELLDKVLYEA SSIMKNCYSRSDA >gi|333758476|gb|AFIH01000001.1| GENE 1167 1160424 - 1161632 1147 402 aa, chain + ## HITS:1 COG:BS_yjcL KEGG:ns NR:ns ## COG: BS_yjcL COG5505 # Protein_GI_number: 16078255 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Bacillus subtilis # 1 398 1 389 396 356 48.0 5e-98 MGTLISAEDTWMLWTVLALSAALSIYLEQKYKWASKITGCILATLFTLILANLNIIPTDA PVYDAVWGYVVPLAVPLLLFNANVKKIWKESGRILVIYLLSSVGTLLGGFAAFFALRNAI PKLNDIIPMFVGTYTGGSVNFIAMSQQYEVPGKTVSAALVADNLLMAIYVFVLISLPAMA IIKKLYKQPYEDALRANTADQDQNKTMAAKYWGAKEISLKDIAFAVAIAFTIVTLSTKLA GVISSAFSGGDVVSKFIGGFFGNKYLLITTFTMLIASFFPKQMSSVKGAQEIGTFLIYLF FAVIGAPASIPMIIRESPLLLVLALIVVATNMIVSLILGKIFKFSIEEIIIASNANVGGP TTAAAMAVSKGWTELIIPGLLTGTLGYVLGNYLGIFVGMLLH >gi|333758476|gb|AFIH01000001.1| GENE 1168 1162067 - 1163341 856 424 aa, chain + ## HITS:1 COG:TM0240 KEGG:ns NR:ns ## COG: TM0240 COG0448 # Protein_GI_number: 15643012 # Func_class: G Carbohydrate transport and metabolism # Function: ADP-glucose pyrophosphorylase # Organism: Thermotoga maritima # 7 422 5 423 423 452 51.0 1e-127 MIKKEMIAMLLAGGQGSRLGVLTKNVAKPAVSFGGKYSIIDFPLSNCINSGIDTVGVLTQ YQPLRLNAHIGIGIPWDLDRNRGGVTVLQPYESLRDTGFYSGTANAIYQNIAYIENYDPE YVLILSGDHVYKMDYEVMLEYHKAMKADLTIASMPVPMEEASRFGITVTDEHGRITDFQE KPKNPKSNLASMGIYIFNWKVLKEALIQNKDVPDCDFGKHIIPYLFQKQGQIYAYEFNGY WKDVGTLLSYWESNMELIALIPEFNLYEEYWKIYTQTDNAAPQYIASEAQIERSIIAEGC EIHGKIRNSIIGPGVTVEHGAVITNSIIMENTVIKEDTHIDQAVVAENVIIGKACEIGIG EYQESSYDSRVYCSNLATIGENSLIPDGVRVGRNTAIYGPTELSDYPDGLLVSGGVIIKE EERL >gi|333758476|gb|AFIH01000001.1| GENE 1169 1163338 - 1164459 1056 373 aa, chain + ## HITS:1 COG:TM0239 KEGG:ns NR:ns ## COG: TM0239 COG0448 # Protein_GI_number: 15643011 # Func_class: G Carbohydrate transport and metabolism # Function: ADP-glucose pyrophosphorylase # Organism: Thermotoga maritima # 1 359 1 360 370 312 42.0 8e-85 MRAIGIILAGGNNKRMHELSNKRAISAMPVAGTFRAIDFALSNMSNSHIQKVAVLTQYNS RSLNQHLSSSKWWDFGRKQGGLYVFTPTITAEHGDWFRGTADALYQNLVFLQSSHEPYVI IAAGDGVYKLDYNKVLEYHIEKRADITVVCKPIDANDDISRFGCLKMNEDSRIVDFEEKP VFTDANILSCGVYVIRRRLLIELLEKAHDEDRYDFVKDILVRYKNLKRIYGYRLNTYWSN IASLESYYKTNMDFLKREIRDYFFKQAPGVYTKLADNPPAKYNPDSNVHNSIVASGCIIN GTVENSVLCRKVYIGNNCIVRNSVILNDVYIGDNSVLENCIVESRDTIRANTTYIGTPEN IRIVIEKNERYTM >gi|333758476|gb|AFIH01000001.1| GENE 1170 1164475 - 1164750 345 91 aa, chain + ## HITS:1 COG:CAC3223 KEGG:ns NR:ns ## COG: CAC3223 COG2088 # Protein_GI_number: 15896470 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized protein, involved in the regulation of septum location # Organism: Clostridium acetobutylicum # 1 82 1 82 95 112 69.0 2e-25 MEVTDVRVRKVDKEGKMKAIVSITFDEEFVIHDIKVIEGEKGLFIAMPSRKTTDGEYRDI AHPIRSTTRELLQQTILEKYQEDAEEESEAL >gi|333758476|gb|AFIH01000001.1| GENE 1171 1164991 - 1167867 2176 958 aa, chain + ## HITS:1 COG:mll3725_2 KEGG:ns NR:ns ## COG: mll3725_2 COG0642 # Protein_GI_number: 13473203 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Mesorhizobium loti # 383 654 67 312 328 174 36.0 6e-43 MKIITERKMRFIYLLFLLFIFIFIFGSSVREYYRLGFREHKFEVLKTGWQRILPDGSKKK LGSSEEMVLIKDLLIERQLPSEVPYSLTSLYIKTMHQDLTIWIDEKPVYQFDYQDIPPFN SKIPPLYWVRLPIQKDQLGSTIRIEFRGRARSVENTLEGLYFGEDLSIICEILWKNILQI FASLCLIFMGIGLLVEYLILDRRRGEEKGSFYLGAVLFFLGLWMGCQIDARQLIFNNILL IWNMEYLSLIMIPIPALLFINKVERGNCQRGIYWLCLSIALCDLLIIVSAGIGLYSFAEL NLLIDCILLLTCFAIARSFVVIRWRDPDLFKDLTWMIGAGSTLISFSCIELVSFFLNGYE NQGRFLSVGSVIFAFQMIHMQSMEYDKVRNEKNKLEVAEKVQSEFLANMSHEIRTPINTV IGMNEMILRESHDDVVLGYARNIQVSGESLLSLVNDILDFSRIESSGIKLVPKPYELANL LHELSNTARFRAEWKNLRFSVIVDEDTPAVLFGDVFRVREVLVNLLDNAIKYTDTGTVTL TVTFKSLPVEEKKFSFNEEDANVSPEDREEQPPANAVPVELQFAVKDTGLGISEKDQKLV FQKFQRVHSGWRKNIQGTGLGLPITRYLTKLMHGRIELKSALGEGSCFTAYIPQYRLNDE SIGNFEDRYKKQKGVGNGFNKGFIASDAKILVVDDNELNLQLVKNLLKRTEVQIDVAYSG EECLEKLATGTYDIVYLDHMMAGMNGEETLEKIREQAIENRYGKPIPVIAFSSNVYLFES HKDGSSKFDAYLLKPVDGNELDKSLYTFLPENLIRKRSNEEYFEAEMKKHTISEKEDKEK LLDREIGLAYCMQDESVYQEILTLFKENSTEKQKELEDAFSSSDYAKYRLYSHGLKTTSL TVGAVLLSENAKKMEYAAKRVVEGVEKEEAIQYIRYNHSAFIRLYNKTVEEASKYLEP >gi|333758476|gb|AFIH01000001.1| GENE 1172 1167908 - 1168636 617 242 aa, chain + ## HITS:1 COG:CAC1581 KEGG:ns NR:ns ## COG: CAC1581 COG3279 # Protein_GI_number: 15894859 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Clostridium acetobutylicum # 4 234 2 230 234 97 27.0 2e-20 MDRLKIVVCDDEIVQQKLMKALLEKYLLENEMQAELKLYPSGQSCLQDSREILDADIFLL DIFMPELNGIDIARELKDLGTNGKIIFITGGNDYITEAFEIHAFSYIQKPVEYEKFAKVM NAVVHCLEKARYIDIIADREKRRVYLADILYVETLGRRLVIYTKDEELETYLSVKNFMDE YGGNEFLQISRYAAVSKSRIQRIVGRSLYLMNGKELLVSEKYLPTTKKLHIEYIHTKKVA NV >gi|333758476|gb|AFIH01000001.1| GENE 1173 1168650 - 1169975 1216 441 aa, chain + ## HITS:1 COG:all2874 KEGG:ns NR:ns ## COG: all2874 COG3706 # Protein_GI_number: 17230366 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing a CheY-like receiver domain and a GGDEF domain # Organism: Nostoc sp. PCC 7120 # 5 290 12 308 330 132 31.0 1e-30 MLQSIVIVDDETIPRKIAEKALKDKYVVSAYADARTALSELTVTRPNLLLVDLHMPDMDG YAILNEIRQLEDHELSNVPVVIMTSDDDAKNEIKGFDLGAYDYIRKPLLPDVLIRRVDRI MKGEETLKHLEKKAEIDILTGLLNRSASIQQINENLKMRRESGLLLMMDLDHFKLVNDRY GHEMGDKVLSLVANTLKKFVRSDDVLGRIGGDEFVIFYRGFWKDEALQERCEEICGAVKR VVAETLQTSKMQFGISIGVSSSPKNGLDFLSLYQKADEAMYHVKSGGKGGYFVYNEDDEE EKAEANIISLESIQKRIENRDFFPGAYMVDYNDFCSIYHFIKRSGERGHIPVQMVLFTVE ESEDVDRRGLEERMQAFGELLSQTIRRGDVVVRCSNKQYMILLVGTEKENSLIAIDRVMQ KRSEEEKRKYPIHYEINTLIS >gi|333758476|gb|AFIH01000001.1| GENE 1174 1170007 - 1170795 666 262 aa, chain - ## HITS:1 COG:no KEGG:Closa_3855 NR:ns ## KEGG: Closa_3855 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 2 224 15 235 236 120 34.0 4e-26 MAESGRKQDFYMKKKKKKSPFLSILLHYVLPYLVLNSCILFFVLATPKLQVNDPTEHGDK NALAVLVHVDSVLPIKNFSAKLEGEELNFTKENQNYLIPVSSNGNLRISVTSINGMQKVV NSQINSFDENPPVIDEDHVVLGSGYVEFTVSDTQSGVDFASIYGIDKDGDNIKPKNIDEN TGTVQFSMKTNGITVYVSDNAGNQVSGNFNLEDSPYPKTKADLEEESSDNKKETASKKGS DSDKSSSKTESSSEKKSSKKKN >gi|333758476|gb|AFIH01000001.1| GENE 1175 1170906 - 1171013 91 35 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQSIKVLRIDFIVFSPLKKPIYLIIGEKYLKYNIY >gi|333758476|gb|AFIH01000001.1| GENE 1176 1170979 - 1173276 2458 765 aa, chain + ## HITS:1 COG:CAC0120 KEGG:ns NR:ns ## COG: CAC0120 COG0840 # Protein_GI_number: 15893416 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Clostridium acetobutylicum # 387 683 219 515 555 225 45.0 3e-58 MKSIRNTLILCMLLPIVVAFAMLGGTLMLYMSNISVSDGNKTMPIAAAQTGESVDGVLNL VQSKVDSLVMATSSLADEDKILGKDSQYFSDFEKRMNELVVSSTKDINGLVASYIRYDPK LTYGTSGTFYTDADGNGTLEEVTPTDLGAYDPSDMEHVGWFYTPLQNKKATWMEPYFNAN INKTIISYVSPVYLKSGEGFAVVGVDFDFDYLNQLFLKHQKYHPGDTYLLNADGKILYHP DFTNGENFADILDGKYKNVISQILSTDSGYVNEGSKKDAVLLGFSTLDNGWKVVVTPDHK DIYGAIETLQMTLGFFIAVYLIIMLFISLWVGNKQAKPILALTKSVKKLASGSLDEEISV KSRNEIGSLAHGLRQLVGQLKDYRAYIQEITDSLNEIQNGNLNIELKNEYAGEFAKVKVA LLDLSDKLTDLIGNIQLSSDQVSESAKNVSNGAQNLTEGSMSQASSIEELSATISDISSR IKMNADNAGKADSEAKVGQEELLKSDGQMQEMKKSMNHINEKSAEISKIIKTIDDIAFQT NILALNAAIEAARAGEAGKGFAVVADEVRNLAQKSAEAAQNTTVLIDETVKAVEVGSSLA DSTANTLHQVVEGQNSLSNLITEIARASEQQSSAVSQITTGIEQISSVVQNNSATAQESS AASMELNEQAEKLRNQISRFRLRERDKSGLDAEPTVVPDEKEEVLEEVPENKEVFREETK RSEYNKPVKAVDVRSEYNKPVKAVNVRPEYREAEEEFVSNAGDKY >gi|333758476|gb|AFIH01000001.1| GENE 1177 1174310 - 1174414 103 34 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MILNYSRFFFLFSDSQIDIFTSYGKIIKKLLDEM >gi|333758476|gb|AFIH01000001.1| GENE 1178 1174424 - 1175449 576 341 aa, chain + ## HITS:1 COG:CAC0944 KEGG:ns NR:ns ## COG: CAC0944 COG0021 # Protein_GI_number: 15894231 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase # Organism: Clostridium acetobutylicum # 5 300 3 297 662 376 60.0 1e-104 MNREIETKAINSIRILSADGIQKANSGHPGLPLGAAPAAYTLWGKFLNFNPSHLQWENRD RFILSAGHGSMLLYSLLHLFSCGLKKEDLMSFRQMGSLTPGHPEYGHTMGVDATTGPLGA GLAMAVGFAMAESHLSAEFNKEGLPLVDHRTYALCGDGCLMEGISSEALSLAGTLNLHKL TILYDSNHISIEGNTEIAFTENVQKRMEAFGFKTLTVEDGNDVSAIAAALQKAKEDDSAP YFITVKTDIGYGVPKKQGTASAHGEPLGEENIKEMRKFLSWEYEEAFYIPEEVYAHYQGL LEEKRRHTMIGRRLKRSMRKNILQSMRNMYLIMIPRKSWIW >gi|333758476|gb|AFIH01000001.1| GENE 1179 1175446 - 1176405 583 319 aa, chain + ## HITS:1 COG:CAC1348 KEGG:ns NR:ns ## COG: CAC1348 COG0021 # Protein_GI_number: 15894627 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase # Organism: Clostridium acetobutylicum # 1 319 339 658 663 375 57.0 1e-104 MNNEALWAKQEKADATRNSSGEVLQILKEAVPNLFGGAADLAPSTKTEMKGEGFFSKENR LGKNIHFGVRELAMAGIANGILLHGGYRSYASTFFVFSDYIKPMARLSALMRIPQIFILT HDSIGVGEDGPTHEPIEQLAMLRSTPNFRVFRPADRQETAAAWFSALSSTDCPTAIVLSR QNLPQLCRDGKEALQGAYILSDSEKTPELIFIATGSEVELAENAAEILRAEGRAVRVVSM PSMEVFEMQSKEYRDKVLPASVEKRISVEALSSFGWGKYVGLKGKSLSMDGFGASGPAKE LFKHFGFTVENLVNMARSL >gi|333758476|gb|AFIH01000001.1| GENE 1180 1176460 - 1177116 700 218 aa, chain + ## HITS:1 COG:lin2886 KEGG:ns NR:ns ## COG: lin2886 COG0176 # Protein_GI_number: 16801946 # Func_class: G Carbohydrate transport and metabolism # Function: Transaldolase # Organism: Listeria innocua # 1 212 1 209 214 288 70.0 5e-78 MKFFIDTANVDEIREAYDMGIICGCTTNPSLIAKEGRDYTETLKEIASFLDGPISGEVKA DTVKAEDMIQEGREIASISKNMVVKIPMTEEGMKAVKVLSKEGIKTNVTLIFSATQAILA ARAGATYVSPFLGRLDDISSDGMILIEDIMEIFSMYPEIETEVICASVRHPIHVVQCAKT GADIATVPFKVLKQMMHHPLTDIGIEKFIADYRKVFSN >gi|333758476|gb|AFIH01000001.1| GENE 1181 1177211 - 1177840 497 209 aa, chain + ## HITS:1 COG:CAC2713 KEGG:ns NR:ns ## COG: CAC2713 COG2344 # Protein_GI_number: 15895970 # Func_class: R General function prediction only # Function: AT-rich DNA-binding protein # Organism: Clostridium acetobutylicum # 2 202 3 203 214 218 51.0 9e-57 MERKEISKAVIQRLPRYYRYLEDLMDQGIERISSGDLSRRMHLTASQIRQDLNNFGGFGQ QGYGYNVFNLHEEIAKILKIDQVHSMIIVGAGHLGLALSNYTNFRKRGFDIKGVFDNNPK VIGQEAGGVKVSPMSEMKDIVEKNHIRLAALCIPKDAAVKIVDDLISYGVSGFWNFAHVD LEVPEHVVVENVHLSESLMRLSYRVFEEQ >gi|333758476|gb|AFIH01000001.1| GENE 1182 1177843 - 1179192 267 449 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225093729|ref|YP_002662469.1| ribosomal protein S15 [gamma proteobacterium HTCC5015] # 136 431 233 490 497 107 28 2e-21 MISVGSDILEIARVERLQKKGRVERIFTEEERRQSEGKASRLAGDFSVKEAVAKALGTGI RGFSLLDIEVLRDELGKPYVKLYGNALKLFKARRGQALEVSISNTKSLVIASAVILGKEA GGQMDALCETKRYFLSIPKRNPLSHKGSYGTVGIIAGKKGMAGAAFFSALAAYRAGAGLV HLVSDEENRSVLQTMVPEAILSDVRELKVEELLQKSEIILFGPGIGTGEDRERLLLKLLN ELRNFPPAFLILDADALNVIAESSLLDEALCKAAEYCPIILTPHLKEFSRLCHCSLEEIL KNKEELGRKYAAKHRCILILKSHDTMVFTPFSEDTGKETVPGKEDNFWEGKGFFHNREAS PSLSKGGSGDAFAGLLAGLLAVLKERYPEIDKHELAFQAACLSVLIQVRGGKLAAEAEGE HAVLARDLPHYFALAMEEFIEKDDGKDDR >gi|333758476|gb|AFIH01000001.1| GENE 1183 1179170 - 1179610 284 146 aa, chain + ## HITS:1 COG:BS_dal KEGG:ns NR:ns ## COG: BS_dal COG0787 # Protein_GI_number: 16077531 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Alanine racemase # Organism: Bacillus subtilis # 5 125 1 122 389 72 35.0 3e-13 MMGKMTDKKSYDRTYAIVNLDRMEENLRLCKKSLREGIAFCAVIKMDAYGHGMVEVAKAV EEECALFGVATIEEAITLRKAGIEKNILVLGVVPESQYTSLFDYRVMPSLFTTRQLDKIE KIAEKRKQNWRYILLWIPEWEESGSK >gi|333758476|gb|AFIH01000001.1| GENE 1184 1179574 - 1180368 517 264 aa, chain + ## HITS:1 COG:CAC0492 KEGG:ns NR:ns ## COG: CAC0492 COG0787 # Protein_GI_number: 15893783 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Alanine racemase # Organism: Clostridium acetobutylicum # 1 244 130 375 386 202 44.0 4e-52 MDTGMGRIGIQVEEKDALKTAMDILNSPYVEVEGIFSHFASCDEADKSYTLKQHKRFHDF LESLKKEGYTIPLCHISNSAGILEDIGTEYNMVRDGIALYGIYPSSEVRQDLPLKMALSW KAKISHIKTVPKGEGISYGSAFVTDREMRIATIPVGYGDGYPRLLSGKAEVIIGGKKCPI LGRVCMDQFMVDVSAVDAVLFQEVTLLGEEGGEAISLYDWEKFGVFPYEFLCGLGNRVPR VYFRGKKWIGTFDPHSNLHIDDFS >gi|333758476|gb|AFIH01000001.1| GENE 1185 1180446 - 1181186 975 246 aa, chain + ## HITS:1 COG:CAC2295 KEGG:ns NR:ns ## COG: CAC2295 COG0217 # Protein_GI_number: 15895562 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 1 244 1 239 246 220 53.0 2e-57 MSGHSKFSNIRAKKEKNDAAKGKIFTIIGHELALAVKQGGTDPNSNSKLRDVIAKAKANN MPNDTIQNGIKKAAGALDAVNFEEMQYEGYGVNGVAIIVKVLTDNKNRSAADVRSAFTKG KGSLGAQGSVSFLFEEKGQIILDKEVMDDLDKDFDALMDIAIMAGAEDLIDRDDSYEIIT SPADFSTVRENLEQENIPMVQAEVVMIPGNTVSVTEEEAVKNLRKTLDLLDASDDVQSVY TNWEEE >gi|333758476|gb|AFIH01000001.1| GENE 1186 1181203 - 1183008 1236 601 aa, chain - ## HITS:1 COG:CAC2111 KEGG:ns NR:ns ## COG: CAC2111 COG1293 # Protein_GI_number: 15895380 # Func_class: K Transcription # Function: Predicted RNA-binding protein homologous to eukaryotic snRNP # Organism: Clostridium acetobutylicum # 1 596 1 567 570 336 35.0 6e-92 MAFDGLFLSALVSEFKDTILGGKISKIVQSEKDELQLTIKKERQQYLLHLSVNPSIPLVY LTDKNKTAPLTAPSFCMALRKHIGNGVIQNITQASTTLSEEGLERVLLLHISHRDELGDI GTKYLSVEIMGKYSNIILLKEDFTILDAIKRISSVQSSVREVLPGRKYFIPDQFEKENLL YFPLENLQSYLESRAKSRNGESKAETLSELLFHSFSGLSPMSARELSLDAGLASDQELDK LSSSDWKKLSEAICRLRLRIQEGNFSPAILYENEKAFDFSAIPVRQYSGNPAFHLEVFPS PSELLTFYYGGKEKEDRVRQKSTDLKKQCTTLLERVSKKLSLQEKQLKDTEKKERFRIFG ELLTTYGYSLKGGEKELICENYYNGTEEHIPLDESLSPIENAKKYFEKYDKAKRTELNLS TQVKESRSTLKHLQSILNSLSTAENAEDLEDIRREMGEYGYMKPLSKKKKKERKEDKSSP RIFRSSDGYLLYVGKNNYQNEEVSFRIAEGTDFWFHVKGSAGSHVIAKTEGKNLEELPDR LFEEAAELAAYFSSEKESAKVEVDYTERKNLKKVVGGAPGFVIYHQNYSILVSPKKVPEE L >gi|333758476|gb|AFIH01000001.1| GENE 1187 1183143 - 1184012 677 289 aa, chain + ## HITS:1 COG:CAC1716 KEGG:ns NR:ns ## COG: CAC1716 COG1561 # Protein_GI_number: 15894993 # Func_class: S Function unknown # Function: Uncharacterized stress-induced protein # Organism: Clostridium acetobutylicum # 1 289 2 292 292 179 38.0 6e-45 MKSMTGFGRATANLQERDITVEIKSVNSRFLDLSFRLPRSFQAMELSIRNHLKDRISRGK VELFLSLEDSAERNKKLLVDYALAERYKKEITELSEKLGIPCSVTGDRIFFYPEVFRLVE EEVEEDADGLLSIVDKAIEEFVHSREVEGRKLQEDLELKLSEMESYVRFLKEREPEIRLQ YEKRLRKKIEESLEGRSIDEGRLLEEVAIFSDKVSTDEEITRLDSHIQRVKAILKEESAV GRDLDFLMQEMNRESNTILSKATDLDITDIALKAKNCIEKMREQVQNIE >gi|333758476|gb|AFIH01000001.1| GENE 1188 1184024 - 1184662 590 212 aa, chain + ## HITS:1 COG:BH2512 KEGG:ns NR:ns ## COG: BH2512 COG0194 # Protein_GI_number: 15615075 # Func_class: F Nucleotide transport and metabolism # Function: Guanylate kinase # Organism: Bacillus halodurans # 2 197 4 196 204 181 46.0 8e-46 MEKGMLVVVSGFSGAGKGTIMKRITEKYDNYALSISATTRSPREGEEEGKSYFFVSKARF EEMIDKDELVEYAKYVDNYYGTPRKFVEDCLNRGKDVILEIEIQGALKIKKKYPGSLLIF MTPPSAEELRSRLIGRNTEDEATVNKRLSRAIVESEGVEAYDYILVNADIDTCTEKLHNL IRASHDRVEAHLDLIEKIRKDLRRIEDATSNI >gi|333758476|gb|AFIH01000001.1| GENE 1189 1184643 - 1185065 611 140 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227872688|ref|ZP_03991018.1| ## NR: gi|227872688|ref|ZP_03991018.1| DNA-directed RNA polymerase [Oribacterium sinus F0268] DNA-directed RNA polymerase [Oribacterium sinus F0268] # 1 97 1 96 140 112 80.0 1e-23 MLRPTYNDLIDSMNKNREEGELEVQSRYSVVIASAKRARQIIDGDAPLVKAEEGRKPLSV AIEEISKNLVNVEKGLDYEEEPIQHSHETEDFSRYALDEDLDEEDEEEDDPEAEEEEYID EEDEEEDDYSDGDYPSDGEE >gi|333758476|gb|AFIH01000001.1| GENE 1190 1185065 - 1186336 918 423 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229230948|ref|ZP_04355465.1| SSU ribosomal protein S12P methylthiotransferase [Desulfotomaculum acetoxidans DSM 771] # 1 417 19 459 462 358 44 7e-97 MKLYLESLGCDKNRVDSEKLLSELLEKYEGSEVTLDPSEADIAIVNTCSFIGPAKEESIN TILDLAEYKKSGRLKKLIVAGCLVERYKDEIRKELPEIDEIASVKDYVRRLDSQMKRVES GERYTRYLKIAEGCDKYCSYCIIPRLRGHFRSIPMDAVLEEARELVEDGAKELILVAQET TLYGTDLYGKKSLHLLLHALSEIEGLVWIRVLYCYPEEIELPLMEELRDNPKVCHYLDLP IQHSSDRLLKAMNRKTRREELKEKIALLRREIPDICLRTTLITGFPGETEEDFQDVLSFI TEERFDRLGVFPYSQEEGTPAASMENQIPESVKNKRLSRIMELQQEIAFQKAEEQRGRIL KALITGYDEEEGRVILRSYMDSPEIDSFIFVKGPERVSGEFVQVKVVDTEGYDLIGEYCE SSQ >gi|333758476|gb|AFIH01000001.1| GENE 1191 1186320 - 1186862 373 180 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 5 175 484 669 904 148 44 1e-111 MNLPNKLTVLRALMVPVFVFFILYPAEQEMLFRLVALFLFCTASFTDYLDGHIARKRNLV TNFGKFMDPLADKLLVCSALICMIPLSRLPAWYVIILISREFIISGFRLIAVEQNVVIAA SYFGKLKTVSQMVMIILLILQLPALHFVNLLFIYLSLILTIVSLIDYLYKNRKVLQEGGF >gi|333758476|gb|AFIH01000001.1| GENE 1192 1186862 - 1187380 287 172 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 14 170 741 904 904 115 42 1e-23 MGEKKKEKELHYPIDATLEEQVVFLLKNSKKTITTAESITGGLVSAAITSVEGASDCFKV GYVTYSNKSKRKLLSVKKELLRKEGAVSASTAKEMAIGAMMESEADLAVALTGNAGPGAL EEKEVGLVYIAVCAGGKTKVLEFHFTGNRKEVREQACNAALQMVRTYLTEKK >gi|333758476|gb|AFIH01000001.1| GENE 1193 1187380 - 1187670 177 96 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227872684|ref|ZP_03991014.1| ## NR: gi|227872684|ref|ZP_03991014.1| hypothetical protein HMPREF6123_0953 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_0953 [Oribacterium sinus F0268] # 1 94 1 94 96 120 63.0 5e-26 MRLSKDLCFGNRAQKYIPYLMENLREGHIVPMAYLVYSGYGSNLFEFYPSSMLKMKNFPR IEDEILGIAYGYKDALQLVSMMSLKKLRGEEKCSSL >gi|333758476|gb|AFIH01000001.1| GENE 1194 1187655 - 1187921 211 88 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLIALTILKYLLWILLFLLLLLLFLLFFLLFVPFRYKLDGKKEREEEHPKGEFSLRFPLM HFQASYQEEKLSYSGKILFFTIFEGGKE >gi|333758476|gb|AFIH01000001.1| GENE 1195 1187918 - 1188340 298 140 aa, chain + ## HITS:1 COG:no KEGG:EUBELI_00953 NR:ns ## KEGG: EUBELI_00953 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 19 132 211 325 327 61 28.0 9e-09 MKEIIGKGKKIFREKLRSFKEVLETVKELSKEESREMIALVLRETLRFLKTCRIRKAKGE LYFAIEDPYTMGQVLEGLTLFYPLVQDKIRLVPEFGDSYYYGKIRIEGRIRLIHLLILLV RLLKNKQFRKLVLKGGKHGK >gi|333758476|gb|AFIH01000001.1| GENE 1196 1188330 - 1188854 566 174 aa, chain + ## HITS:1 COG:CAC2059 KEGG:ns NR:ns ## COG: CAC2059 COG3874 # Protein_GI_number: 15895329 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 1 118 1 127 158 58 34.0 7e-09 MANNNTKELIQELFQGMDGFVQSKTVVGEPIKLGDTVLIPLMELSCGMASGAFVKENNKK GDGGAGAMNSKISPVAMLVIQNGRTKLIRVKNEDAISKIIDMIPEAIDKITGGSRVSESA EEKGQEALDSMVQAEKKQKKEDKKYTVLSAGESGDIYADSAEDVIDIDLSDFEE >gi|333758476|gb|AFIH01000001.1| GENE 1197 1188977 - 1189210 383 77 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227872680|ref|ZP_03991010.1| possible ribosomal protein L28 [Oribacterium sinus F0268] # 1 77 1 77 77 152 93 8e-35 MDFLKEGGAIMAKCAICEKAVHFGNQVSHSHRRSNKMWKANVKSVRVKVDGGTKKMYVCT SCLRSGKVERAVAGAAE >gi|333758476|gb|AFIH01000001.1| GENE 1198 1189352 - 1189714 378 120 aa, chain + ## HITS:1 COG:lin0743 KEGG:ns NR:ns ## COG: lin0743 COG1725 # Protein_GI_number: 16799818 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Listeria innocua # 1 119 1 123 125 80 38.0 5e-16 MQYNPSLPIYLQVEADIIKDMLNGKLSSGERLPSGRDLAVKYKINPNTASRVYQELELKG LCFTKRGMGTFVTEDERRLKTERERRAKEYTKEYVVRMKDLSISRELIQEYVKEEIDASV >gi|333758476|gb|AFIH01000001.1| GENE 1199 1189701 - 1190399 256 232 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 2 211 12 230 318 103 31 4e-20 MLQSKKLSKKYNGKIALDHVDVELLDGKIYALLGPNGSGKTTFMKILSSLTRESEGEVTL DGEALSMKSRALVAYLPTESHAYPFMTVGEFGEYYKKFFTDFQETRYTEWIRRMEIPFKT PFKVLSSGMDKKVRVAATLSRDAKLLILDEPFNGVDLLAREEIVKMILEVMAEDKIILLS SHLVEEVESYVNTALFFSEGRLIAKEDVEELRSSRGMALTDRYRELFGKVGD >gi|333758476|gb|AFIH01000001.1| GENE 1200 1190401 - 1191156 575 251 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227872678|ref|ZP_03991008.1| ## NR: gi|227872678|ref|ZP_03991008.1| conserved hypothetical protein [Oribacterium sinus F0268] conserved hypothetical protein [Oribacterium sinus F0268] # 1 251 1 246 246 142 42.0 2e-32 MWTLIRYEMRKTMQIKIISVSLIAIFEFLLLFGSTSGNIAVMGLAGVFLFFFSFVAFLLF GLSSMASLSKDLSTNQGYMLFMLPKPSYTFLLAKILESLLSTFCLSLLLYFLFLFDIFFF SVDVASFMDVFKMVWGLTMESRLGDFIHFMISIALIYAGFWLYMSCLAVLCVTVQASFFR GKILAFLISIIVFLFLAVNIVEWCATLSEKIVDLVGLDSQMNSPLQILFLTLVSLLCFGL SAYILEKKRNY >gi|333758476|gb|AFIH01000001.1| GENE 1201 1191303 - 1191662 423 119 aa, chain + ## HITS:1 COG:BS_yloU KEGG:ns NR:ns ## COG: BS_yloU COG1302 # Protein_GI_number: 16078646 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus subtilis # 1 119 1 119 120 99 41.0 2e-21 MKGKIPSHFGEVEISERVIAEYAGNSAVSCFGIVGMAAVPMSGKGLARLLRKESYHKGID VRIKENKISLDFHVIVAYGVSIKAVAENLMESVEYRISQFTGMEVDRINVYVEGVRIID >gi|333758476|gb|AFIH01000001.1| GENE 1202 1191679 - 1193358 1674 559 aa, chain + ## HITS:1 COG:BS_yloV KEGG:ns NR:ns ## COG: BS_yloV COG1461 # Protein_GI_number: 16078647 # Func_class: R General function prediction only # Function: Predicted kinase related to dihydroxyacetone kinase # Organism: Bacillus subtilis # 3 559 4 553 553 418 42.0 1e-116 MSKVLSVKELKKAFLAGANQLNAKKDLINELNVFPVPDGDTGTNMTMTILSAAREVDSVE DKNLKDILKAMSGGALRGARGNSGVILSQLIRGFTKELSESGEMDALSLAKAFQRAVETA YKAVMKPKEGTILTVAKGMADKIMELSLTEEEILPLFEKVYAHGEEVLEHTPELLPVLKE AGVVDSGGAGLMAVMEGALRSLRGEKIVLDLELKESGAVSALVGERKNRGEISTADIRFG YCTEFMVNGDHAFTDDEVDALRTYLNGIGDSIVCFSDEELIKVHVHTNHPGDAFEKGLSM GYLSKMKVDNMRLEHHELLIEDASRIAAMEKLDEEQVKPAERKTFGFVAVCSGDGLENIF RDLGVDQVVSGGQSMNPSTEDLMQAVEKINAEHIFILPNNKNIILAAEQVGSILSEQSLA VIPTKTIPQGISAILSFQEEEDFEKNKEAMTESLSYIHSGEITYAVRDTSIDGREIHSGD ILFLGDQGLLSAAKDISSAVKESIPKMGEGEILTLYYGEEVKEEDAEALVSEIQNEHPEL EVELHRGGQAVYYYIVSLE >gi|333758476|gb|AFIH01000001.1| GENE 1203 1193417 - 1195438 1290 673 aa, chain + ## HITS:1 COG:DR1916 KEGG:ns NR:ns ## COG: DR1916 COG1200 # Protein_GI_number: 15806915 # Func_class: L Replication, recombination and repair; K Transcription # Function: RecG-like helicase # Organism: Deinococcus radiodurans # 11 661 119 765 784 399 38.0 1e-111 MLQDAIERVKGVGEKTATLFHKEGIFTKEDLILGFPISYREYPAPVLIQQARDKEWMAFS GVLKEDFRGNSGNAKGFLFAKVFDQSGEMILQYFHAPYIRKVLKKGMQFVFFGQVREFKG KLYLQQPKYFSPEEYREKQSCLESIYSGTKGMKSYVRRKAIAEIFKEDFPYPDLFSEEDL ERLSLRNKKESLRLLHFPRNFKEREEGRRRFAFEELFFYSLYLEKEEKEYKKVKETVLYQ EGEEEDFQSYFPFALTNSQKNCITEMNRELLEKKRIFRFVEGDVGSGKTVIALYLLYLTM KRKKQVAFMAPTEILARQHYENALKLFPNGIALLLGSTSPKEKKRIYKDIAEGKILGVFG TQSLIQELVHFQDLESIIIDEQHRFGVKERRKLEEKGKFPHALFLSATPIPRSLAKLLYG SLPLSVLQEKPADRLPIKNALIHKEEQGKAFSFILEEIQKGRQAYVICPMIEENENLEVE SVLSYEKLLRKFFPENVRISVLHGKMKAEQKEEVMEAFKEGRTQILLSTTVVEVGVDVGN ATVMLIENAERFGLAQLHQLRGRVGRSALQSYCIFLDRKDDEKSRERLEIIKNSNDGFSI SKEDLRLRGPGDLFFGERQSGDLQFHMADPILDEALFRDARLEAERILKQDPNLERHEKL HNAFMRMLEADCP >gi|333758476|gb|AFIH01000001.1| GENE 1204 1195466 - 1196014 529 182 aa, chain + ## HITS:1 COG:lin2159 KEGG:ns NR:ns ## COG: lin2159 COG0742 # Protein_GI_number: 16801225 # Func_class: L Replication, recombination and repair # Function: N6-adenine-specific methylase # Organism: Listeria innocua # 1 150 1 150 185 130 48.0 1e-30 MRVIAGTARRMNLKTPEGLDTRPTQDRIKETLFNIIQFDLTNKDVLDLFAGSGALGIEAL SRGAARAVFCDSARQAILCIEENLQKTHFKEQSLVLSGDYNGAINSLMRKDYHFGLVFMD PPYGRELAEKALIRLKDKAFVSQDTLFVVEAGLQEDFSGMEEEGYSILREKFTKPINMFF FV >gi|333758476|gb|AFIH01000001.1| GENE 1205 1196070 - 1196549 401 159 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 [Bacillus selenitireducens MLS10] # 2 157 4 159 164 159 49 7e-37 MKIAIYPGSFDPVTFGHLDVIARSAKMVDKLIIAVLLNKNKSALFSMEDRVRMISEYVKD VPNVEVHSFSGLTVDYAKKVGATMIVRGLRAVSDFEYELQLAQTNKVIAEEIDTLFLATN LKYSYLSSSIVKEIASYNGDISAFVPKMVETAMKEKYGF >gi|333758476|gb|AFIH01000001.1| GENE 1206 1196565 - 1197131 723 188 aa, chain + ## HITS:1 COG:no KEGG:Closa_1966 NR:ns ## KEGG: Closa_1966 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 179 2 180 193 150 60.0 4e-35 MSRIEQLIGEIEEYIDSCKFQPLSNSKIIVNKEEMEELLVELRLRVPEEIKKYQKIISQQ DAILSDAKVQAESMLSDAKAQTEEMVSDSEIMQQAYAKANALVQDAQNQADSIVNNAVAD ADQIRSNAIRYTDEMLASLETIISRSLENASLHLNELKSSLGDSKSIVQSNREALAKAIP QNKPAEQN >gi|333758476|gb|AFIH01000001.1| GENE 1207 1197503 - 1198855 1255 450 aa, chain + ## HITS:1 COG:MA0901 KEGG:ns NR:ns ## COG: MA0901 COG0733 # Protein_GI_number: 20089780 # Func_class: R General function prediction only # Function: Na+-dependent transporters of the SNF family # Organism: Methanosarcina acetivorans str.C2A # 3 448 9 451 459 397 47.0 1e-110 MGRENFKSRIGFILVSAGCAIGIGNVWKFPYLVGQNGGGIFVLFYLLFLLTMGLPILTME LAVGRASRKSVVQAYKKLEPEGTKWHIHGYVCIFGCYLLMMYYTTVSGWMLSYFFKFLFN SFGNIEQSQVEGIFTTMLSRPEEMTLCMGITVIGGFMICSLGLQKGLEKVTTVMMSALFI LIVLLAVHSLLLPGAMEGAKFYLLPNVEKVKEIGLYHVISSAMNQAFFTLSLGVAAMEIF GSYMSDDYTLVSEGVKICALDTFVAIISGLIIFPACFSFGVEPNAGPPLIFFTLPKVFMH MQFGRVWGALFFLFMTFASFSTVIAVFENLISTSMDNFHWDRKKAVIVNCIFIFVMSIPC ILGYNLWQDLKLIGGRDVLDSEDFIVSNLILPIGSLIYLLFCVSKWGFGFDRYIEECNKG EGIKMSKALKPYFVVVLPILILILLLQGLR >gi|333758476|gb|AFIH01000001.1| GENE 1208 1198885 - 1199919 848 344 aa, chain + ## HITS:1 COG:RSc2968 KEGG:ns NR:ns ## COG: RSc2968 COG0232 # Protein_GI_number: 17547687 # Func_class: F Nucleotide transport and metabolism # Function: dGTP triphosphohydrolase # Organism: Ralstonia solanacearum # 15 327 18 373 387 213 39.0 3e-55 MTIREEMEELEKRTLSPYAFLSMNSLGRDYPEEEDDIRTIFQRDRDRILHSKAFRRLKHK TQVFIQPEGDHYRTRLTHTLEVSQIARSIAKALRLNEDLTEAIALGHDLGHTPYGHAGER ALNQICSFGFSHVEQSVRVVEVLEKNGKGLNLSKEVRDGILNHRSSGHPKTLEAQAVRLS DKIAYLNHDVDDSIRGGIITEEDLPEEFRSVLGRSVKERIDTLIRSVIFSSIGKDSLRMD PVVGEAMQGLRKWMFSHVYKKSEAKEEEWKVEGMLRLLFTFYMEHPETLTEEYRFLFEKS LEDKSVSEKEHLERVVCDYISGMTDEYCNHKFMEYYVPKAWAKD >gi|333758476|gb|AFIH01000001.1| GENE 1209 1199931 - 1201313 1094 460 aa, chain + ## HITS:1 COG:CAC1299 KEGG:ns NR:ns ## COG: CAC1299 COG0358 # Protein_GI_number: 15894581 # Func_class: L Replication, recombination and repair # Function: DNA primase (bacterial type) # Organism: Clostridium acetobutylicum # 4 428 7 429 596 325 41.0 8e-89 MYYGEDIVEEVRQKTDIVDLVGQYVNLKKKGSSYFGLCPFHGEKTASFSVSPGKQIFYCF GCGKAGDSIRFLMEYENLSFVEALEELAERANVTLPKEEKRDKGEEDLRYKILEINKQAA LFYVKQLRSEKGKLGLAYCAKRKLSGESITHFGLGYAGKERDSLYQYCKSLGFKDQVLQE SGLFSFKEAGVYDKFFNRLMFPIMDLHNRVIGFGGRVMGDGEPKYLNSPETKLFDKSRNL FALNFSRKSRSDFFILCEGYMDVISLHQWGFPEAVAALGTAFTEQQADLMKRFHSLVYLC FDSDGAGKKACKRAISILREKNLEGKVINLLPYKDPDEFLKAEGKEAFEKRMEEAKNAFL WEVEEKKKEFDLHDPAGMQKYMESIAELLRTNFQDPVERENYLKAVAREQMLKAENLQHL VDRGEEKTQLEFGLKKASGGKEKREKKNGIPRWRRSFFPF >gi|333758476|gb|AFIH01000001.1| GENE 1210 1201313 - 1201666 231 117 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227872668|ref|ZP_03990998.1| ## NR: gi|227872668|ref|ZP_03990998.1| possible DNA primase [Oribacterium sinus F0268] possible DNA primase [Oribacterium sinus F0268] # 1 114 463 576 581 112 49.0 6e-24 MQRNEFLAIARQYVEEEDFQGNFAKEVYRKLLSGTDAKLILDSYRNEEEKYQKLAKLYHG DLYHMDLERDEEKKLLSDYIRQLKLQKIEAKIREVTDAEGLSLCFKERDKWEHFVFG >gi|333758476|gb|AFIH01000001.1| GENE 1211 1201707 - 1202369 474 220 aa, chain + ## HITS:1 COG:CAC1302 KEGG:ns NR:ns ## COG: CAC1302 COG2384 # Protein_GI_number: 15894584 # Func_class: R General function prediction only # Function: Predicted SAM-dependent methyltransferase # Organism: Clostridium acetobutylicum # 1 208 3 210 229 99 33.0 5e-21 MSKRIERLVELFPGATSVADIGCDHGYSSILLAKKGKAEKIIACDIGESPLESARNNIRK EGLTNKIQCRLGNGLEPLKPFEVEALLISGMGGPLITEIVEKRIEEFSLAVFSPQSDFSN FRRFLAEKMEVLKEEYLEEGGKFYRLFLAGKKEKKAETAARSYVEWEYGWIPLQQKDPVL KALLEKEKRQYGEILEKRQVEEVRNKLAVIEEALGFYREK >gi|333758476|gb|AFIH01000001.1| GENE 1212 1202372 - 1203157 639 261 aa, chain + ## HITS:1 COG:FN1316 KEGG:ns NR:ns ## COG: FN1316 COG0327 # Protein_GI_number: 19704651 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 1 232 1 231 258 144 36.0 2e-34 MDREQFIRFLEDFAPKNLAEDWDNVGFLLGKREGELKRVYICLDVDAYSVDAAIEEGCDF ILSHHPFIFKGMKSVTGENVSGKKVLSLIENRISVFSMHTNFDSVEKGMADLLAEILGWR KEGVMEEVSVSPSGKTEGIGFFTHLDKALSCKELAEYVKEKCKLPYIEYFDGGRKIRKLA VCPGSGRSFLSTLPVDVDAYISGDFGHHDAIDSMEKGLSLINAGHYGLEHFFVPYMQSLI CRQFPEIEIVQEKTRFPGKIL >gi|333758476|gb|AFIH01000001.1| GENE 1213 1203274 - 1204929 658 551 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|39938628|ref|NP_950394.1| ribosomal protein L13 [Onion yellows phytoplasma OY-M] # 36 546 34 542 546 258 30 1e-66 MLVTAKGKTVEIEKGSRFQDLVPFFQEQEEYPLLLAKVGSRIFELHKKVPEEDFTVEWIT IRDRIGMQSYQRSAVFMLLKAFFHHCKGVLGFNVTIDYTLGGGFYGYLSGGVKITTDLLS KVKATMEEYVKAEMPIMKRNISTGEARKLFHDLGMTSKEELFRFRMTSRVNIYSLGNFQD YFYGYMLLNTAYVTKFDLFPYGDGFILLLPKEDNPGELSEFHPMNKLYEVQKTSSNWAKE VGIKNIGELNRKIVSGDPDSLILMQEAFFEKQIGNMAMEIAKKNKRLVLIAGPSSSGKTS FAKRLGIQLSALGKKPHAISVDNYFVGRDQTPRDEEGNYDFESILNVDLPLFNKDMRALL SGERVELPRFNFLTGKREYKGDFLSLGADDILVIEGIHCLNDKMSESLPEDSKYRIYISA LTPINIDEHNRIPTTDVRLLRRMVRDNRTRGYSAENTISMWKSVRRGEDQNIFPYQEKAD VMVNSALIYELPVLKIFAEPLLFQIEEDSPCYQEAKRLLKFLDYVLALSPESIPHNSILR EFIGGSCLHVG >gi|333758476|gb|AFIH01000001.1| GENE 1214 1205145 - 1206293 670 382 aa, chain - ## HITS:1 COG:FN0868 KEGG:ns NR:ns ## COG: FN0868 COG0037 # Protein_GI_number: 19704203 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control # Organism: Fusobacterium nucleatum # 107 365 18 268 277 216 41.0 9e-56 MTNLREISPEEWEKEEYKNYIPIDLRDEAEYQLGHIDNAKWIAISDLLRDDTILDPSKAY LLYCKYGTISRELGERLLEKGHRVANLSGGYGQYILMKIKYASEEERREEIEKSLRKIFK KSIFTPFAKAINDFELIQEGDNLCLCISGGKDSMIMAKLFQELKRHNKFPFTIQFLCMDP GYNEYNRKIIEGNAKLLGIPLHFFESDIFESVFEIESSPCYVCARMRRGHLYSKAKELGC NKIALGHHFDDVIETVLMGMLYSGQFQAMMPKLHSTNFPGMELIRPLYYVREDDIKHWRD YNKLNFIQCACKFTETCSTCHTDGTTSSKRLETKKLIAELKKTNPFIEKNIFRSTENVSK QTILGLKDKGVKHSFLEWYNEE >gi|333758476|gb|AFIH01000001.1| GENE 1215 1206505 - 1206633 114 42 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNPMEMMQFAKELDNFKKTTRRWLSFWQSSLEKDFRRGVSWN >gi|333758476|gb|AFIH01000001.1| GENE 1216 1206766 - 1208025 1145 419 aa, chain - ## HITS:1 COG:BH0663 KEGG:ns NR:ns ## COG: BH0663 COG0038 # Protein_GI_number: 15613226 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Bacillus halodurans # 16 409 10 405 424 246 37.0 7e-65 MKDLEKRLILTYGNGIKWVIIGGLTGGIVGSVAAYFAKGIQIVSQIRSLHPLLIGLLPFA GILIVFSYRLCSVKEPKGTNLVLESIQNGENLPSYMAPLIILATILSHLFGASVGREGAA LQLGSSMGSIIGKVLRLKEKDRRRIMMCGMSAAFSGLFGTPLAASVLAMEICTVGHMYYT ALLPCTVSALVANFFAEKVVHVIEPELHLSLVSEIDWKSALATILLAILASMVSVLFVLS AHKAKALFTKYFKNSYFRIFVCGLILIIGTLLVGSTDYNGTGMDIIVKTITDSGYKVFFF AFLLKILFTSISLGGGYQGGEIVPSLFIGATLGNALQLFLPLDPGLCAALGMASVFCSVT NCPLATLLICFELFGFQASSYFILAIAVSYLCSGNYGLYHTQKILFSKTEEKEINELAH >gi|333758476|gb|AFIH01000001.1| GENE 1217 1208029 - 1208904 887 291 aa, chain - ## HITS:1 COG:CAC1523 KEGG:ns NR:ns ## COG: CAC1523 COG1940 # Protein_GI_number: 15894801 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Clostridium acetobutylicum # 1 289 1 286 288 328 53.0 7e-90 MVYGALEAGGTKMICAICKENGEILEQVSIPTSSPDETMPRVIDFFKDKGIVALGVACFG PIDLDKSSETYGYITSTPKVKWQNYPILPVIEKALSVPAGFDTDVNGSLLGEVSFGSSRG LENAVYITIGTGIGGGVLSNGKLLHGMLHPELGHMILVPHEKDHFQGICPFHKNCFEGMA SGPAMEARYGKKADSLSGVPLVWEIEAYYIGQALCNIILTLSPERIILGGGVMHQMQLFP LIRKQVKEQLNGYIKTKELADLDNYIVPASLNDNQGVLGCLQLAINARKGK >gi|333758476|gb|AFIH01000001.1| GENE 1218 1209166 - 1211202 1581 678 aa, chain + ## HITS:1 COG:DR0933 KEGG:ns NR:ns ## COG: DR0933 COG0366 # Protein_GI_number: 15805957 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Deinococcus radiodurans # 67 636 17 595 644 383 36.0 1e-106 MKSGSASEKSAGKGKDGSVMPKTETVRSKKKTLSKTLEKTVKKTRQKIDKTEETRTAEKK DSLSLKERAEISYRNRLKKHYDEMKWLYHELYHGADEAFQYLLGLLEKYALSREEDLLLL DEERMAKPNWYKNNEQIGTLLYVDHFATNLQGVEKNLSYLKESGFNYLQIMPILESPKGK SDGGYAVSDYRKVQPELGSMEDLRSLSKACHKDGMIIGLDFVMNHTSEEHEWARRARGGE KEFQDRFFVFDDWGIPNEFEKTVPQVFPESAPGNFTYYDDMHKVVMTTFYPYQWDLNYAN FMVFNDMLETALYFCNQGTDVFRLDAVPYIWKRLGTNCRNLPEVHTLVRLFRMAIEIVAP GVLLLGEVVMEPTKVMPYFGTDEKPECHLLYNVTTMATTWHTLATQDTRLLQHQLGQIFT LPKDKIFLNYLRCHDDIGWGLDYEFLAQFDMAEVPHKAFLNAYFRGFADFSEARGELYND DPLKGDARLCGTTASLCGIEAGVKEGNQEKIDAAIRLDLMLHAFLLSQSGIPVLYSGDEI AMENDYSYHDDPLKRHDSRYLHRGKFPWDKAAKRKKKGTVEEKLYSGILRLEAMRRKNKA FSALADTWIIDTKNIHVLAFGRYYEGEKILCFYNFSVFEEIAYVSEVEDYVNVFTNEGMK ARDLRIPSHDFLWLKTSF >gi|333758476|gb|AFIH01000001.1| GENE 1219 1211393 - 1212964 1166 523 aa, chain + ## HITS:1 COG:DR1338 KEGG:ns NR:ns ## COG: DR1338 COG1158 # Protein_GI_number: 15806355 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Deinococcus radiodurans # 119 493 50 424 426 384 56.0 1e-106 MKKKDEKEEKKSISEVTQEGKEELLSPPKKRRGRPKKEEIPESSGGEAEVAEPVLKEEKK KKRSVKKAVKESSSEDSAPSELRIEEDNSLFTAYKETQPADAPEERIMPEKTDEPVKKEG PRDADAKAVQGILEIMSEGYGFIRSENFLPGEQDVYVNNLMIRRFHLKTGDMLYGYAKSR NPQERYSALLYIEKVNNLPISALYGRPDFDKLTPIFPDERIPMEREGKRVSTSLRVLDLL APIGKGQRGMIVSPPKAGKTTLLKQIAQSILQNEPDMTLLILLIDERPEEVTDMMEEVVG DKVQVIYSTFDELPEHHKRVAEMTIERAKRLVEQGQDVCILLDSITRLARAYNLIVPSSG KILSGGMDSAALHMPKRFFGAARNIREGGSLTILATALVDTGSRMDDVIYEEFKGTGNME LVLNRELQERRIFPAIDIQKSGTRRDDLLLSPLEKDAADFLHRELSSDKKNAVEDTLSLF DRTLNNIKLCETLVRGKTVTAPERTTERDENVFVRVNKKNFSN >gi|333758476|gb|AFIH01000001.1| GENE 1220 1213071 - 1213487 545 138 aa, chain + ## HITS:1 COG:no KEGG:EUBREC_1854 NR:ns ## KEGG: EUBREC_1854 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 18 138 8 123 124 76 43.0 3e-13 MKKNSTVVKKDLLKKAGIVSAAMLLGISMMACGSSSGSDKASTEKTTVASEAAKETKKAG EKAEEKSEAQELKGKISEIKDFMFTVTTDDGKSYALNFDKKPEGLDKVKEGDEVIVHYTG ELSEVDSFTGEILSVEKA >gi|333758476|gb|AFIH01000001.1| GENE 1221 1213573 - 1214133 400 186 aa, chain + ## HITS:1 COG:no KEGG:LDBND_1728 NR:ns ## KEGG: LDBND_1728 # Name: not_defined # Def: RNA polymerase sigma factor (ecf subfamily) # Organism: L.delbrueckii_bulgaricus_ND02 # Pathway: not_defined # 1 183 1 184 187 157 47.0 2e-37 MEDQKILELFFARNEEGILRLEEQYKAYCGKIASQILSQREDVEEVLNDTWLSVWNAIPP EKPSFLKAYCAKIVRNTAINRFKMIGAKKRASDSFTESVDELGEDIQLSFNNIEDHINEE ALVSAINDFLSREKKELRIFFVRRYFYHDEIKEIASKYKVGESKVKVSLHRMREALKKKL QEEGLL >gi|333758476|gb|AFIH01000001.1| GENE 1222 1214130 - 1215098 1036 322 aa, chain + ## HITS:1 COG:no KEGG:LBUL_1746 NR:ns ## KEGG: LBUL_1746 # Name: not_defined # Def: hypothetical protein # Organism: L.delbrueckii_BAA-365 # Pathway: not_defined # 1 318 1 282 288 155 31.0 3e-36 MKRNKLIEAMGKIEDRFILEADEEVSSKKAKIFSFGEGKKWIKSSFVKTAVAACLILSVV LPNVSEKSAYALQAIPGLGRYFQLITLRNYSFDDGQHSAEVDTPLLAVEAPKEVVEAYGE RSVAGASQDEVQDGISGEEAAKSAFKEKEDEKLASAEQINLDINAKTEELIREFKEELSK TEYKNLDVSYSVILNSEDYYVLALSVLKQEGDTQTIHHYYTVDKHSGELLQLAKLFPDRP DYKEILSEEVVRQIKVHNQNSKDKYFLQDGEDEEGFREVTDEQSFYINADKQLVLVFPQG EVAPMYMGESQFIIPKSIWQES >gi|333758476|gb|AFIH01000001.1| GENE 1223 1215278 - 1215751 421 157 aa, chain + ## HITS:1 COG:CAC2301 KEGG:ns NR:ns ## COG: CAC2301 COG0744 # Protein_GI_number: 15895568 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Clostridium acetobutylicum # 32 157 74 199 809 92 41.0 3e-19 MGASFGYGLFRGVLDSAPDIHKIHVGPTSYATKIYDKKGNLMSTLVTEGSNRERVSYEEL PKDMINAFVAIEDERFWRHNGIDFRSILRAVRGVVSDDSSAGGGSTITQQLLKNNVFGGG LHEGKFEKYVRKIQEQYLALELEDQPGLDKKEIKKVF >gi|333758476|gb|AFIH01000001.1| GENE 1224 1215748 - 1217751 2000 667 aa, chain + ## HITS:1 COG:SMc01334 KEGG:ns NR:ns ## COG: SMc01334 COG5009 # Protein_GI_number: 15965083 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase/penicillin-binding protein # Organism: Sinorhizobium meliloti # 4 596 167 781 817 175 28.0 3e-43 MTEYLNTINLGANTLGVKVAARRYFNKEVSELSLSESTVIAAITKNPSKLNPITHPENNA VRRKQVLHNMLSQGYIDESRYQEALNDPVYERIQNVNLVTQGEDKPYSYYTDELTEQVVD ALMERLDYKKEDATKLLYSGGLTIYANQDPDLQAIVDQEINNPENYDTAKYSISWRYTLQ HEDGTIVNFSEKDIEKYLKEGKGLSFNGLYTSKDQANKRIEEFKEKVTVDSDRILGETVD YVLEPQASFVLMDPHTGEVLALTGGRGEKKQSKTLNRASNVLRQPGSTFKIITSFAPAID LYGATLASTYYDSEYTLGNKTFKNWYSGGYLGFQSIRDGIVYSLNIVAVRCLMETVKPER GYQYAESLGITSLVKDDENPALALGGLTRGVSNLELTQAFSAIANGGELEKAKFFSKIVD QDGKVLIDTTEDKPTQVMKATTAYLLTDAMKESMESNRAFASDVRVSSTSTRAHFDGMSQ AGKSGTTSNNRDIWFIGYTPYYIGGVWGGCDDNQVLKDAKTGEYNGGTGFHKDIWRKIMT KIHEGKTDPGFSKPEDIVEAQVCRKSGKLPTSGCYQDYRGSAVITELFAKGTVPTEKCTY HTSWGAMLVPENLRDLDTDDHYYSYKEPEEEEEDEDSERDSDSSEKNTKNKITISEQGPS KKKSAED >gi|333758476|gb|AFIH01000001.1| GENE 1225 1217755 - 1218384 460 209 aa, chain + ## HITS:1 COG:lin2660 KEGG:ns NR:ns ## COG: lin2660 COG1739 # Protein_GI_number: 16801721 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 11 191 15 190 211 119 36.0 4e-27 MKFIKECFYGEVEEKKSKFYAGLFPLEREEDVEGLLEACRKKYRDARHHCYAYIFLEEGD GILQEHKKQSDDGEPAKTAGMPILQRMESLELKNALLVVSRIFGGTLLGTGGLSRAYSDA AKAVLEKAVFLERIEGWELQLQIPYSLLGKLEYSFTEQNISILDKAFTENVILKIRVQEE QYSGFEKQIREYGPQVVFLAIKKCRWYTR >gi|333758476|gb|AFIH01000001.1| GENE 1226 1218462 - 1220294 1972 610 aa, chain + ## HITS:1 COG:CAC1684 KEGG:ns NR:ns ## COG: CAC1684 COG1217 # Protein_GI_number: 15894961 # Func_class: T Signal transduction mechanisms # Function: Predicted membrane GTPase involved in stress response # Organism: Clostridium acetobutylicum # 5 604 6 602 605 720 62.0 0 MLKKREDVRNVAIIAHVDHGKTTLVDELLKQSGVFRDNQDIGVRVMDSNPIERERGITIL AKNTAVSYNGVKINIVDTPGHADFGGEVERILKMVDGAILLVDAFEGPMPQTRFVLQRAL ELRLPVLCVVNKIDKPQARPIDVVDEVLELMLDLNASDEQLDCPFLFASSKNGYAKKNLE DPDVDMKPLFESIIDFIPAPEGDPDEETQLLVSTIDYNEFVGRIGIGKVENGKIKVNQDA LVVNHHNPDKRKKVRITKLYSFDGLKRVDVDEATFGDIVAVSGIEDLHVGDTICTEKNPT PLPFQKISEPTISMDFMVNDSPLAGTEGKFVTSRHIRDRLFRELNTDVSLRVEETDSADC FKVSGRGELHLSVLVETMRREGFEFAVSKAEVIYKTDESGKQLEPMEIAYIDVPEEATGA VIQKLTQRKGTLNGMSPLASGYTRLEFEIPSRGLIGYRGEFLTDTKGNGILNTEFEGYGE YRGDLNYRHQGSLIAFEQGEAVTYGLFQAQNRGVLFIGPGEKVYSGMVIGQSPKSEDIEL NVCKTKHLSNTRTSSSDEALKLVPKKIMSLEQCIDFIDTDELLEVTPENLRIRKKILDPT ARKRAGFNRK >gi|333758476|gb|AFIH01000001.1| GENE 1227 1220355 - 1221242 1060 295 aa, chain + ## HITS:1 COG:CAC2378 KEGG:ns NR:ns ## COG: CAC2378 COG0329 # Protein_GI_number: 15895644 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Clostridium acetobutylicum # 1 295 1 293 293 284 49.0 2e-76 MALFKGAGVALVTPMHEDGTVNFEVLEAIIEDQIAGGTDAIISVGTTGEAATLTVEEHLE VIRHTIKVVNHRIPVIAGTGSNCTRSALYTSKCAEEAGADGLLLVTPYYNKATQKGLYQH FKTIAESVSIPSILYNVPGRTGMSIEAKTMAALYHDVKNIIGVKDASGDVGKTLDLMRLV DEDFCLYSGEDGLILPLLAAGSLGVISVLSNVAPKETHDICAKWFAGDLEGARKEQLRAL PLIRALFSEVNPIPVKAAMNLQGKKVGPLRLPLTEMETEHLDSLKEEMIRYGILK >gi|333758476|gb|AFIH01000001.1| GENE 1228 1221341 - 1222096 735 251 aa, chain + ## HITS:1 COG:CAC2379 KEGG:ns NR:ns ## COG: CAC2379 COG0289 # Protein_GI_number: 15895645 # Func_class: E Amino acid transport and metabolism # Function: Dihydrodipicolinate reductase # Organism: Clostridium acetobutylicum # 1 250 2 248 250 210 42.0 2e-54 MKLLLHGARGVMGRNVIDLAKNTEDCEISCGVDAHAEGVGLGFPLYEDIFKVKEDFDVIV DFSVREAVDRLLDFAVEKKKALVLCTTGLSEEQEKKITEAAKSIPILQSGNMSLGVNILQ ELVRLAAAKLYKEGFDIEIVEAHHRRKKDAPSGTALMLEKAVEEGVGEALNKIYDREERH QARERQEIGMLSLRGGTIPGVHEIIFAGEDEIVKLEHTAYSRKIFAKGAITAAFFLLQKE PGKYDMTAVLR >gi|333758476|gb|AFIH01000001.1| GENE 1229 1222153 - 1223589 1294 478 aa, chain + ## HITS:1 COG:CAC1821 KEGG:ns NR:ns ## COG: CAC1821 COG0015 # Protein_GI_number: 15895097 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate lyase # Organism: Clostridium acetobutylicum # 5 478 3 476 476 612 62.0 1e-175 MEAFSSYESPLSGRYASPEMQKIFSPSFKFKTWRKLWIALAETEKELGLPITEEQLRELR ENAENINYDVAKQREKEVRHDVMSHVYAYGLQCPKAKGIIHLGATSCYVGDNTDLITMRE GLRLIRKKLLNCMKVLSDFAMEYRALPMLGYTHFQAAQTVTLGKRASLWLHDLYLDFCEI EECILSLKLLGCKGTTGTQASFLELFEGNHEKCKELDRRIAEKMGFSEVYPVSGQTYSRK VDFRVLSVLSAIAQSAHKFSNDLRLLQHLKEVEEPFEKQQIGSSAMAYKRNPMRSERMAA LSNFISSEIMNPSITASTQWFERTLDDSANKRLSVPEAFLACDGLLDLFYNVAKNLVVYP KMIAKHLNQELPFMATENILMDAVKKGGDRQELHERIRMHAMEAGKRVKEEGLENDLLER IVKDEAFPLTEEDIQGLMRGELYIGRAKEQVEEFVSEYIQPILEKNREELNLSVEIKL >gi|333758476|gb|AFIH01000001.1| GENE 1230 1223649 - 1223849 181 66 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKRIFAILALVFILLTLLHFLYTAFTGGSKESLLAHLFLLMIVPTVFYVLQWVTKLIRKD SSETEE >gi|333758476|gb|AFIH01000001.1| GENE 1231 1223928 - 1225214 1481 428 aa, chain + ## HITS:1 COG:SP0019 KEGG:ns NR:ns ## COG: SP0019 COG0104 # Protein_GI_number: 15899967 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate synthase # Organism: Streptococcus pneumoniae TIGR4 # 5 420 6 419 428 367 43.0 1e-101 MVQAIVGANWGDEGKGKITDYLAENADVVVRFQGGANAGHTIINNYGRFSLHLLPSGVFN PNVTSVLGNGVALDIPKFLTELHALEEAGVPTPKIYISDRVQVLMPYHVLQDEYEEERLG KKSYGSTKSGIAPFFSDKYAKIGLQVNELYYDDILEEQLQKILEIKNALFESLYGKKGLD YDTVLSELKKQREQIRPYLCDTSLFLRKAIKEGKKILLEGQLGTMKDTDHGIYPMVTSSH TLASFGAVGAGIPPYSINSVVCVTKAYSSAVGAGEFVSEIFGEEAEELRKRGGDKGEYGA TTGRPRRVGWYDAVASRYGCALQGATEVALTVLDPLGYLEEIPVCTAYEIDGKVVKDFPV TPLLRKAKPIYTVLKGWHCDIRGIRKYEELPEACRDYIDFIEKELEVPITMVSNGPERHE MLMRRPKI >gi|333758476|gb|AFIH01000001.1| GENE 1232 1225227 - 1226579 991 450 aa, chain + ## HITS:1 COG:no KEGG:EUBELI_00863 NR:ns ## KEGG: EUBELI_00863 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 20 387 1 369 535 283 36.0 1e-74 MAHCPNCGGEVRFSIDSQDLACQNCQTHFDPVTYNRTPESMEQDVYETKVFTCPNCGAEI ESTDLSATGFCAYCGSAVVFESRIKQEKKPQKIIPFQITKEQCKEIYLKKIRSFYYRQRD LEDPAYLDRFVGFYLPYWLYNYHFGGEINLKGDRKYVRGNYVIMEDYSLSGKLKGEVEGI PFDASLRFDDNISAVIAPFSREKMKEFTPNYLLGFYSEIADTESSGYEKEAFSMLGEELG RFVTGSNGFGTEDIRIHGGINPYSLEKEMTVGRGMFPIWFLSYKKRDRIAYAVVNGQTGK IYCDIPIDEQKFQRASLLMAVPIFLVLNLFIQISAESLPIYTLALSLFLIFLSQLQMKKI QERDKEALRYSKEQKKQEETDRKKSGTSFALLALFLSVAILIWHPVRDEYYYIAAALSAL ASILSLRMMIRKFNVLTTRAVPDFFEKKEE >gi|333758476|gb|AFIH01000001.1| GENE 1233 1226582 - 1227403 773 273 aa, chain + ## HITS:1 COG:no KEGG:EUBELI_00864 NR:ns ## KEGG: EUBELI_00864 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 36 229 45 239 273 125 35.0 2e-27 MRTIFKSLLFALFLGLFSMGKAYALDVSSFLSSSVYENEKTGYTAYIDDEEDLLSSSEEE KLAQKLIPLTEYGNVAFLSGRGENDAASNIRDFYKEVFYGKSGLIFFIDMGNKEIRIQSG GNFYKTITSNVANSITDNVYVFASKGDFYKTASLAFRQVQGKMEGRFIATPMRWISNFFL AIFLGLLFNFTMLLLSWKQNKAGSRAVLGALQPNITLEDREVLMTNQSKMRISSGGGSGR SGGGRSGGGFSGGGFSGGGHSGGFSSGGGGHRF >gi|333758476|gb|AFIH01000001.1| GENE 1234 1227655 - 1229922 2803 755 aa, chain + ## HITS:1 COG:SP0585 KEGG:ns NR:ns ## COG: SP0585 COG0620 # Protein_GI_number: 15900494 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase II (cobalamin-independent) # Organism: Streptococcus pneumoniae TIGR4 # 1 753 1 748 749 914 60.0 0 MQTSVIGFPRVGALRALKFTTEKFFKGLVSEQELEALAKDIRKKQWLKMQEKEVDFIPSN DFSFYDNFLDAAVLFNIIPERYRELSLSPLEKYFAMARGYKGPAGDVKALAMKKWFNTNY HYMVAEISDKDEIRLAGDKPFKEYEEAKALGVETKPVVIGPFTLLKLLRYTEKKTEKDFL PEAISAYKAYVEKFASLGAQWIAFDEAYLVRDLDQDDLALFTALYKEILSVKGETKVLLQ TYFGDVRDAYESILALPFDGVGLDFLEGKETRNLLAKGFPKDKLLFAGLINGKNIWKNHY EKTVETVKDLEKKGVSVVLGTSCSLLHVPYTLEGENKLSDEVKRHFSFAVEKLSELLDLK HILDGKAGAEVLEENKVLFATARPNSEDKAVKERCAAITDADYTRLPAFSEREKIQKEEF KLPLFPTTTIGSFPQSADVRENRNAFKKGEKSKEEYVAFNKAKIAEWVKIQEELDLDVLV HGEFERNDMVEYFGELLSGFLFTEKAWVQSYGTRCVKPPIIWGDVRRLSAMTVEWSTYAQ SLTKRPMKGMLTGPVTILNWSFPREDISIAESTKQIALAIRDEVLDLEKNGIKVIQVDEA ALREKLPLRKSDWYSEYLDWAIPAFRLVHSGCQAGTQIHTHMCYSEFTDIIKAIDNMDAD VISFEASRSDLLILDSLRENHFRTEVGPGVYDIHSPRVPSVEEIKEALGKMLKKIEKEKL WVNPDCGLKTRGREETLASLKNLVQAAKELRNEYC >gi|333758476|gb|AFIH01000001.1| GENE 1235 1229909 - 1230811 591 300 aa, chain + ## HITS:1 COG:Cj1202 KEGG:ns NR:ns ## COG: Cj1202 COG0685 # Protein_GI_number: 15792526 # Func_class: E Amino acid transport and metabolism # Function: 5,10-methylenetetrahydrofolate reductase # Organism: Campylobacter jejuni # 13 285 4 276 282 309 54.0 3e-84 MSIVDLFSRKTVFSFEVFPPRRNAPIETIYETLYELQDLRPDFISVTYGAGGGENKQSTI SIAEHIKNICHVPSVVHFPCIGLTKEDILDKIEEFKSAGIQNILALRGDIPEGMENRGDF RYASDLVAFLKENGDFRISAACYPEGHIENPDKVADIRNLKTKVDAGAEYLISQLFFDNE YFYDFLEKCDLAGISVPIEAGIMPVINRRQVLRMAGLCGVKIPKKFQRILEKYEDNSVAM RDAGIAYAVDQIVDLLTHGVDGVHLYTMNNSYIAREIYKATHSLFDTGEKGEKEGTSASA >gi|333758476|gb|AFIH01000001.1| GENE 1236 1230808 - 1231893 822 361 aa, chain - ## HITS:1 COG:BH1666 KEGG:ns NR:ns ## COG: BH1666 COG0287 # Protein_GI_number: 15614229 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydrogenase # Organism: Bacillus halodurans # 6 355 6 357 366 257 40.0 2e-68 MEWNHITFFGLGLIGGSLAKAIKKVYPDTHISVLDKDSSSVQIALTEGIVNQELKSFEEI GKDCNLLFLCAPVEENRSFLKKLKKQLSPHTLLSDVGSTKTAIMEEAEKLGISAQFCGGH PMAGAELSGYKASDALLLENAYYLLTPGKDFSSENTEKMKTFLSSIGSIPFVMSPEEHDR SVACVSHLPHLIAASLVKLLKKEDEKGSMKKLAAGGFKDISRIASSSPVMWQQICLSNKK PILEMIEAYMQQLEEIRSSIKKEEPHAIEELFRESGTYRNSMDSSAQGLIHSDYAISIRV QDHPGAISIISTILASNRVSIRNIGINHNREKGEGALQLSFYTGEDCEMAKKLLHKYGFD L >gi|333758476|gb|AFIH01000001.1| GENE 1237 1232126 - 1232683 623 185 aa, chain + ## HITS:1 COG:BH2799 KEGG:ns NR:ns ## COG: BH2799 COG0231 # Protein_GI_number: 15615362 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) # Organism: Bacillus halodurans # 1 185 1 185 185 208 57.0 4e-54 MVSAGDFRNGITIEMDGQVVQIIEFQHVKPGKGAAFVRTKLRNVINGGVTDKTFRPTEKF PAARIDRVDMQYLYDDGEMYNFMNNETFEQIALSHDQIADSMKFVKENETVKVVSYQGNV FSVEPPLKVTLEVVHTEPGIKGNTSTGATKPATVETGVEVQVPLFVNIGDKIIISTQTGE YESRA >gi|333758476|gb|AFIH01000001.1| GENE 1238 1232803 - 1234605 2072 600 aa, chain + ## HITS:1 COG:CC3359 KEGG:ns NR:ns ## COG: CC3359 COG0018 # Protein_GI_number: 16127589 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Arginyl-tRNA synthetase # Organism: Caulobacter vibrioides # 1 600 1 600 600 393 37.0 1e-109 MESVKKILQNAVELAFESAGYEKELGKVTISNRPDLCDYQSNGALIGAKKYQKNPIELAE DVQKYLEGDKALSVPLFSKVEVVKPGFLNMTLSPAFLAKYCGLMAEDEKLGLDPKEGQKV LVDYGGANVAKPLHVGHLRSASIGEALKRLAIRMGNEAVGDVHLGDFGLQMGLIIGELEE RGELEKDFTIGELEEIYPFASAKAKEKNADGSLKNEEYANRAKDITVRLQKGEEKYKKAW EKIMKVSIADLKKNYDALDVHFEIWKGESDAEPYFPRLIEILEEKGLSYRSNGALVVDIA EPGDKKELPPCMILKSDGASLYATSDLGTIMDREKLYPQNWYLYVADSRQELHYTSFFRV GRKAELLPKETKLTFMGFGTMNGKDGKPFKTRDGGVLRLEKLIDEIRDSVLSRMEEGKDT GLTSEERQETAKVIALAALKYGDLSNQITKDYIFDLEKFSAFEGNTGPYILYTIVRIASI LRKYAEANGESSADTATWIANYGKNYPIHSEDEPSLLALEKQIVVFSDEMKDAWKELAPH KICGYIYALANSFNAFYHNVKILGEEDKEKQKNYIAHLALTWRILTDAIHVLGFSAPEKM >gi|333758476|gb|AFIH01000001.1| GENE 1239 1234622 - 1235161 629 179 aa, chain + ## HITS:1 COG:CAC2749 KEGG:ns NR:ns ## COG: CAC2749 COG0622 # Protein_GI_number: 15896006 # Func_class: R General function prediction only # Function: Predicted phosphoesterase # Organism: Clostridium acetobutylicum # 1 171 6 172 180 168 48.0 5e-42 MSDLHGSSYYTKKVLDVYRAGDYEKILLLGDVLYHGPRNDLPKDYAPKEVIKMLNPLKDE IFAVRGNCEAEVDQMVLDFPVMADYALLDLGGRSIFLSHGHVYNHESFPLRKNGDVFLQG HTHLPVAEKKERDGKFYYHLNPGSVSLPKEGNPNSYGVLTEKGFTIYTLDGEVVKEVEF >gi|333758476|gb|AFIH01000001.1| GENE 1240 1235985 - 1237082 1044 365 aa, chain + ## HITS:1 COG:STM4108 KEGG:ns NR:ns ## COG: STM4108 COG0371 # Protein_GI_number: 16767374 # Func_class: C Energy production and conversion # Function: Glycerol dehydrogenase and related enzymes # Organism: Salmonella typhimurium LT2 # 3 360 1 361 367 278 42.0 1e-74 MKMLREMRNPLKYVQGRDALLSFCKETEYMGKNYLFVCSHSSYEACHDKLEKSFEGTDKT RYYEIFGGISSESEIARMRKIVQENSIDTVVGVGGGSAVDTAKATAFYEKKQIVIIPTVV ATDAPCTGLSVIYHDDGSFKEYLFYPTNPDCVLVDSTVIAHAPVRFLIAGMGDALGTYFE GRASLRTESPSLENAGIPGAGMVLAKYCYENLKKFGEAAIVACENHVVTKALDNIIEACV YLSGVGADNVNVAAAHSFYNGLTSLGGHSAPHGNCVAFGTLVQLCLEGVKKEEFEEVQDF CVAVGLPITLEELGNFSDQDLHTIAKNACIPGETIHNLAGDVTETELYDAIIAADALGRK RKGSC >gi|333758476|gb|AFIH01000001.1| GENE 1241 1237308 - 1237763 281 151 aa, chain + ## HITS:1 COG:CAC3531 KEGG:ns NR:ns ## COG: CAC3531 COG1943 # Protein_GI_number: 15896768 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Clostridium acetobutylicum # 7 151 5 149 157 193 64.0 9e-50 MAKKEYALAHTKWMCKYHIVFTPKYRRKIIYYQYKSDIRDIIKQLCAFKGVEIIEGHLMP DHVHILVSIPPKISVSSFMGYLKGKSALMIFDKHANLKYKFGNRHFWAEGYYVSTVGLNE ATIKKYIQDQEKHDIALDKLSVKEYEDPFKG >gi|333758476|gb|AFIH01000001.1| GENE 1242 1238178 - 1239719 1381 513 aa, chain + ## HITS:1 COG:CAC2700_2 KEGG:ns NR:ns ## COG: CAC2700_2 COG0519 # Protein_GI_number: 15895957 # Func_class: F Nucleotide transport and metabolism # Function: GMP synthase, PP-ATPase domain/subunit # Organism: Clostridium acetobutylicum # 195 513 1 316 316 416 64.0 1e-116 MNHEKILVLDFGGQYNQLIARRVRDEGVYAEVYSSDIGIEKIKELSPKGIIFTGGPQSVY KEESQHIGKEIFELGIPIFGFCYGAQLIAYELGGEVATAPVSEYGKTETHVEKSSVLFSD VSEETTVFMSHTDYIAKVPEGFTITAHTEHCPVAGMEDVKRQIYAVQFHPEVQHSVEGQK MIHHFLYDVCKCTGDWKMASFVEEQVSLLKNKIGSGKVLLALSGGVDSSVAAGLLSRAIG KQLYCVFVDHGLLRKNEGDQVEEIFGEKGDFELNFVRVNAGEEYFEKLAGVEDPEKKRKI IGEQFIRIFEREANKIGTVDFLAQGTIYADVVESGLGKGAVIKSHHNVGGLPKNISFKEI VEPLRLLFKDEVRKVGLELGLPEHLVYRQPFPGPGLGVRIIGEVTPEKVRMVQDADFIYR EEIEKAGLSRSYSQYFAALTNMRSVGVMGDFRTYDYAVALRAVITDDFMTAECADIPFSV LQRVMNRIVNEVKGVNRVFYDLTSKPPGTIEME >gi|333758476|gb|AFIH01000001.1| GENE 1243 1240146 - 1240916 239 256 aa, chain + ## HITS:1 COG:no KEGG:Spea_2956 NR:ns ## KEGG: Spea_2956 # Name: not_defined # Def: hypothetical protein # Organism: S.pealeana # Pathway: not_defined # 5 255 45 283 283 88 29.0 2e-16 MFRRKENKIALADLYFPQLNLSVEIDEDHHKTQEELDKERTADILKKMRSLENVVEFEPE ELRINAEFSQTLESLNAQIDKVVELIKERINKLTKPLEWEDIIKTADQVKAEGKDIFDGK IALRTIQEVSELFDKGYHGTQRCYFEKSKGSNIWIWCPKLKLEDVIQRVPYNNEISLDGN TIYESTKENANEFVEAVLQKPEADQKRIVFPYYKMESGEMAYVFKGIYVLDSEKTREIQK RVWVRESKCISLNLSK >gi|333758476|gb|AFIH01000001.1| GENE 1244 1241088 - 1241348 117 86 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|331003281|ref|ZP_08326785.1| ## NR: gi|331003281|ref|ZP_08326785.1| hypothetical protein HMPREF0491_01647 [Lachnospiraceae oral taxon 107 str. F0167] hypothetical protein HMPREF0491_01647 [Lachnospiraceae oral taxon 107 str. F0167] # 1 78 27 106 111 88 60.0 2e-16 MGYPTRKNLYNWVYEEKYPTKAREDYPIVDYPPDHPRNSPLQVKLDAIHRCYELGENIKY YANWNYPKAAIMIKKRYLGKLINMKM >gi|333758476|gb|AFIH01000001.1| GENE 1245 1241739 - 1241873 133 44 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227872992|ref|ZP_03991289.1| ## NR: gi|227872992|ref|ZP_03991289.1| hypothetical protein HMPREF6123_1228 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_1228 [Oribacterium sinus F0268] # 1 34 1 34 75 66 94.0 8e-10 MIQWFRQKNYAKEITLMDIVALLEVLVKGLLDAEEDDTDEQDQD >gi|333758476|gb|AFIH01000001.1| GENE 1246 1241854 - 1242384 344 176 aa, chain + ## HITS:1 COG:FN1951 KEGG:ns NR:ns ## COG: FN1951 COG2110 # Protein_GI_number: 19705253 # Func_class: R General function prediction only # Function: Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 # Organism: Fusobacterium nucleatum # 17 170 20 171 175 121 43.0 7e-28 MSKIRIEKVSITDAGTDCIVNAANEHLQGSSGVCGAIFKAAEWNQLQKTCDAIGYCDTGS TAVTPAFNLDAKYIIHAVGPVWMDDNHKETQKLYGCYQASLKLAMENECHSIAFPLISAG IFGYPKDKAWRKALQACNDFIAKNSNYDIVILFAVLDDKILQLGKEELQRQALEVM >gi|333758476|gb|AFIH01000001.1| GENE 1247 1242384 - 1243349 497 321 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|315653823|ref|ZP_07906739.1| ## NR: gi|315653823|ref|ZP_07906739.1| conserved hypothetical protein [Lactobacillus iners ATCC 55195] conserved hypothetical protein [Lactobacillus iners ATCC 55195] # 1 320 3 310 362 342 55.0 2e-92 MNYKNAGFRAFYHHFTAIPLKEMLKTSVKDFSGADKANCILTYGYIDQQCGLTMEILAVG EESKNGFRFYDGNDTIRSFIRIGAVAEDEFSFFDDEDGTLAKRYADKLEMLHHYDASEEV EKTREMSFLDGSRHEYFVDDVLVYLMKDGLKPEGCWTRITGLGDHWIMGTLLNEPDQNFG YHKGETIAFFVQETDEKKVICYSDMNPSQKITAANLEDGSMLEEAVTAFNNERTEPHLID ILEILRDSYVWIPCNAVLSDEDQKYWNDIAQKVTDDLDADPAELIGKEFKTVGATRMIPD ILQNGEQFFFPIFTTTEAMGG >gi|333758476|gb|AFIH01000001.1| GENE 1248 1243384 - 1243524 154 46 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227873220|ref|ZP_03991493.1| ## NR: gi|227873220|ref|ZP_03991493.1| hypothetical protein HMPREF6123_1432 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_1432 [Oribacterium sinus F0268] # 2 44 330 372 373 62 65.0 8e-09 MLEVIPLARNNEKDLAGIVLNAFTEPFVLDKEIWDIVENMKSRIEE >gi|333758476|gb|AFIH01000001.1| GENE 1249 1243916 - 1244041 82 41 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLEHSKEYMWVFYSPEGPVSPPLSFCMNTWEAEMVPAWRNT >gi|333758476|gb|AFIH01000001.1| GENE 1250 1244002 - 1244739 369 245 aa, chain + ## HITS:1 COG:SPy0131 KEGG:ns NR:ns ## COG: SPy0131 COG3436 # Protein_GI_number: 15674346 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pyogenes M1 GAS # 4 240 227 450 450 112 30.0 7e-25 MGGRNGTGLEKYLKGYKGTLVTDGYQPYHTLMKKDGELKVAGCWANVRRKFAEIIKATQK GQALTPAQEAAAEAIRLIDMIYHQDNSFKESSTEERLTNRQQTVAPLVDAYFAWVKQTRN KICGSQKLTEALNYSFNQEPYLRVFLQDALISLDNNDAERSIRTFCVGKHSWHITDSVRG ASASALLYSIAESAKANQLKPYEYFTYLLKELIKYPRENVPEEELKKLMPWSEELPDSCR KNKTR >gi|333758476|gb|AFIH01000001.1| GENE 1251 1245185 - 1245343 123 52 aa, chain + ## HITS:0 COG:no KEGG:no NR:no METKAIYRAENLKGKICSDNRIGTLEQIQGSVEIVEKDYKRGIDKTEQDLQR >gi|333758476|gb|AFIH01000001.1| GENE 1252 1245522 - 1247402 771 626 aa, chain + ## HITS:1 COG:all3465_1 KEGG:ns NR:ns ## COG: all3465_1 COG5635 # Protein_GI_number: 17230957 # Func_class: T Signal transduction mechanisms # Function: Predicted NTPase (NACHT family) # Organism: Nostoc sp. PCC 7120 # 291 604 250 580 662 65 24.0 4e-10 MEGVMEMLLSGILCNVVSNIIYDIGKCVVGKFQYRKEQFDKQDIEKYVGEKLNNKYEHLC ESGLLVEYLNLPLVKDTINNYIIYKITGHLGSNLANVQKKKNKMYLIEEDVVVFLTTGLM KRYENNKTITIPNKSDVFRLFMDIFEMSSTYLCDKLGQDQKAVAFFVNTKIDFVSNMLMS KIQEVISTLEKSMTKDVIDRNDDFEEVKEHYIKLLKENHNTAHIYLLDRFEINSFYVPPF LKLRCNENLINKLNFIRTRERYNAFQSRDVNNEQFFDDWRYIFERNNIAYITGGAGYGKS LFMNKVITDFENLNIFDSREYLVIYGELKSFYVNNSEDPISVIEFLQNSMTKETLIEKEK ITKEFVQYYLNMGRCIILLDALDEVEKSKRKSLHKKVVTYFKGENPNNKICITSRSRGFF PEKEIEVYDIAPLDKTQIETYVNNIIKLGKFDNKDKEAFLEQSNTLVEKGFLCSFLVLSL LINIYKAERELPENKLELYQKCFEYIANKREKEKTQEKSRWKVIAPLMKDNTFMVLSNLC LPNNAEADKETIKDTLMNEYKTKYSSEVETEEAVDEFLAFCADRTELFVPSAGEDKFKFF IDLFLNISIHSMYLLEQVLLKKFMHV >gi|333758476|gb|AFIH01000001.1| GENE 1253 1247447 - 1248100 177 217 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLKQKNEFKYQKLIEYIFSIVLDGAIENKERLGALNILILGMQVIDDEVYKKQLVDFVVD ESDFIFKHQKNIHSQWILINIISGNSEYLSVVNDKYEEKAILSVLFSFADIFQEVKRGLE ELSKENKNDDNLLEYIHFRYRMFYYDEFYTQTYFHQNSIKILFQELTIEKIKTLCKNYKI PEKSLAKLVGVFNEYLNQNPSFKNKIDKLIFAENDSI >gi|333758476|gb|AFIH01000001.1| GENE 1254 1248456 - 1248518 63 20 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKDGIKCKAIAFDFVKVNGK >gi|333758476|gb|AFIH01000001.1| GENE 1255 1248554 - 1248760 135 68 aa, chain + ## HITS:1 COG:no KEGG:Closa_3160 NR:ns ## KEGG: Closa_3160 # Name: not_defined # Def: transposase # Organism: C.saccharolyticum # Pathway: not_defined # 4 66 135 197 555 95 69.0 8e-19 MESVCHACTEEELTKQFPKGWHELPDEVYKELLYTPAKFKVLEHHIKVYAGDCDKGGILR AKAPNRAA >gi|333758476|gb|AFIH01000001.1| GENE 1256 1249345 - 1249614 153 89 aa, chain + ## HITS:1 COG:no KEGG:EUBELI_01771 NR:ns ## KEGG: EUBELI_01771 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 1 86 97 182 182 129 69.0 5e-29 MKKVAAESFRVLKKGKYCAVMIGDKRIHGNVIPLGFQLLTCFLETGFVLKEIIIKVQHNC RATSNWQNKNRNFLMLAHEYIFVFYKPNF >gi|333758476|gb|AFIH01000001.1| GENE 1257 1249761 - 1250429 178 222 aa, chain + ## HITS:1 COG:TVN0849 KEGG:ns NR:ns ## COG: TVN0849 COG0338 # Protein_GI_number: 13541680 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Thermoplasma volcanium # 2 216 4 209 277 139 38.0 3e-33 MSEQSLKPFVKWAGGKRQLLGEILERIPHSFENYIEPFLGGGAVLFALQPKRALLNDINA SLIHTYKTIACEPQRFIVQVKELDSRIDEGGKEYYYLIRDLYNSKLMREEFDLELAALFV FLNKHCFNGLYRVNGKGFFNVPYNNSKKSSIDEEVIFEVSKYLKDLTICLGDFEDACKDA KEGDFIFWIVLMLHLIPPHLNLTQKKDLIWIAISGFLNFLMI >gi|333758476|gb|AFIH01000001.1| GENE 1258 1250450 - 1250593 174 47 aa, chain + ## HITS:1 COG:no KEGG:EUBELI_01770 NR:ns ## KEGG: EUBELI_01770 # Name: not_defined # Def: DNA adenine methylase # Organism: E.eligens # Pathway: Mismatch repair [PATH:eel03430] # 1 47 231 277 277 83 82.0 3e-15 MLTNHNTEFINDLYGNKGYKMDVVNVKRMINSDASKRTGEEIIICNY >gi|333758476|gb|AFIH01000001.1| GENE 1259 1250609 - 1251421 318 270 aa, chain + ## HITS:1 COG:HP0092 KEGG:ns NR:ns ## COG: HP0092 COG0863 # Protein_GI_number: 15644722 # Func_class: L Replication, recombination and repair # Function: DNA modification methylase # Organism: Helicobacter pylori 26695 # 11 259 14 256 277 234 49.0 1e-61 MGDFFEKKQNFFYEDTSSFLIHGDSLKLLSKMNPECIDMVFADPPYFLSNDGITCNSGRM VSVNKGEWDKIGNNSPNVEEKHRFNRKWIKLCKRILKPNGSIWISGTLHNIYSIGMALEQ EGFKIINNITWQKTNPPPNLACRCFTHSTETILWAQKADKKAHHYFNYELMKEQNGGKQM KDVWLGSLTKPSEKKAGKHPTQKPEYLLERIVQASTKENDIILDPFCGSGTTGVVAKRLG RRFIGIDTEEEYLTICKKRLETESNGEKEL >gi|333758476|gb|AFIH01000001.1| GENE 1260 1251402 - 1252265 406 287 aa, chain + ## HITS:1 COG:no KEGG:EUBELI_01767 NR:ns ## KEGG: EUBELI_01767 # Name: not_defined # Def: type II restriction enzyme # Organism: E.eligens # Pathway: not_defined # 1 286 1 286 287 457 79.0 1e-127 MEKRNFDEWLTKFRSSISTYDYYIDFSKVIKNVDSIKIELNILNSLIGSKNIEEAFENII ARYPETLECIPLLLAVRSNQIYAQDDEGAFEYNFKKMNYPIEQYKVFMRKTGLFDMISNH LVNNLVDYAFGIETGLDSNGRKNRGGHQMEDLVEKYITSAGFVKDVNYYKEKYLIDIERM WGIDLSVISNQGKAAKRFDFVVKTEDMIYAIETNFYGNGGSKLNETARSYKMLSQESDTV EGFTFVWFTDGIGWRSARENLRETFDVMEHIYNIDDMEQGVMKKIFI >gi|333758476|gb|AFIH01000001.1| GENE 1261 1252483 - 1255476 1057 997 aa, chain + ## HITS:1 COG:SP0575 KEGG:ns NR:ns ## COG: SP0575 COG1061 # Protein_GI_number: 15900485 # Func_class: K Transcription; L Replication, recombination and repair # Function: DNA or RNA helicases of superfamily II # Organism: Streptococcus pneumoniae TIGR4 # 435 992 10 544 548 268 32.0 4e-71 MADCMNEETFLSKISQLENEIEYLHGLLDNAGISYKRKAKELEELSPDKNLAFEENQGAR ILPVTITKQHIQYYYHLFKGRNDVYSKRSGKANKKTGKHGYYTQCWNFWKDGICPKKNNP QFNCGECQNQKYKELTGQVLYEHLIGAREDASDVIGLYPMFPDETVNFLVFDFDCHDDKI GGDDGANFESDWMTEVNAFRKICEINEVPVLVERSRSGKGAHVWIFFEKPILASVARRFG TALLSKGAESVNMRSFKYYDRMLPAQDHIPLNTKTGKPGLGNLIALPLQGQALKLGNSAF IDENWNAYPNQWECLKEVKKLSSETVEERIKEWSAEGILGVLSNEFEADTEGANDTKPWE KTKPSLHKEDVSSAVEIIIADKVYVGTKDMKPRMQNALRRMSAFSNPDFYKKAAMGLSTK CIPRIVFCGYDDAGYICIPRALLDSVIDRFNEVDISFTLTDNRCTGMTLDVSFNGTLYEE QMRAAKAILEHDNGILAATTSFGKTVVGAYMIAQRKTNTLILVHNTEIQKNWIEDLNKFL DVNAELPEYKTKTGRIKKRKSLIGKLHAGHNSMTGIIDVAIFSSLGKGDEINPMLEQYGM VIMDECHHGAAQTVEDVVGSAKAKYVYGLTATPKREDGLEKKVFMQFGPIRFRYTAKERA EKQGIDHFVYPRFTMLVSTANLKVMEANRAVIECESRNEQIIADVENCIQNGRTPLVLTK YKEHAELLYQRLQGKADHVYLLQGGGSRKAKDKMRIQMRAISDAESIVLVAIDKYIGEGF NFPRLDTMMLTMPAAAEGNIEQFAGRLHRDYETKKEVIIYDYVDSHIRVLEKMYHKRLRT YKKIGYEICNNINVEKQNANTIFDIDSYEKVYEKDLLEANKEIIISSPGINHAKLDAFVK LINQRQEDGIKLTVITLNPEGYPEEKIEDTKRLVEILKNCGIRVKLQEHMHEHFAIIDDE IVWYGSMNFLSRAKADDNLMRVKSKDVAQELLERSFG >gi|333758476|gb|AFIH01000001.1| GENE 1262 1255773 - 1256132 159 119 aa, chain + ## HITS:1 COG:SP1143 KEGG:ns NR:ns ## COG: SP1143 COG4679 # Protein_GI_number: 15901009 # Func_class: S Function unknown # Function: Phage-related protein # Organism: Streptococcus pneumoniae TIGR4 # 5 113 4 115 121 60 36.0 1e-09 MKFEVEFYETKNGIQPVREFILSQEKKFIAKTLDMIQLLQDNGYQLREPYSKALEDGIFE LRIKLGNNISRIMYFFYVDQHIILTNGFIKKTQKTPRNEIEKAKKYRADYMDRKESYNE >gi|333758476|gb|AFIH01000001.1| GENE 1263 1256125 - 1256424 359 99 aa, chain + ## HITS:1 COG:no KEGG:EUBREC_3010 NR:ns ## KEGG: EUBREC_3010 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 4 94 6 96 100 108 63.0 7e-23 MSRKFDDFLQEQLQDPEIRKEYEALQPEHIVIQAMIDARKKSGMTQKELAEITGIAQGDI SKLERGSANPSIRTLQRLAKGMGMILKIEFTPEQVSVVK >gi|333758476|gb|AFIH01000001.1| GENE 1264 1256754 - 1257578 568 274 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1721 NR:ns ## KEGG: Vpar_1721 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 254 1 276 547 175 42.0 2e-42 MDKILDLDKSVASLVKEYPEVADIMANLGFTEIKNPAMLASVGRIMNLKKGSQMKKIPLE EIVRAFREKGFEITDGGKPFPTESADSAEVAKIAKAADSAEEAEIAKAADSAEAAKAPVD RAEALRSLLDRLSEGEDLESVRADFVRDFKDVDPAEIMRAEQGLMESGMPLSKVQKLCDV HSALFHGDTREEKIANAERAVQASLKNHAGKEEKNYINKSVEAESLIQIPGHPLSTFTKE NEALGQYLENTKARWESLVESLSGKAGGKDKAEK >gi|333758476|gb|AFIH01000001.1| GENE 1265 1257629 - 1258741 595 370 aa, chain + ## HITS:1 COG:L52568 KEGG:ns NR:ns ## COG: L52568 COG2461 # Protein_GI_number: 15673592 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Lactococcus lactis # 18 356 146 436 490 152 30.0 1e-36 MLAVFSEELAKLRSFIVHYAKKGDLLYPLLKVKYDISGPSQVMWTVDDEIRDTLGELKRE LSEKSKGVRALRNTGEDLDDEEEEYSRSKAEIAESILNSFFLKNYLAVRNRMEEMIYKEE NILFPMCALQFQKEEWIQIYFDSKDYDACFSVENASWKEAEETGNTPEKWRAVEGAGEAE REKGRKEASEEHSGDVHNAELPQGAGKMLEDLLRRVESLEGKSGNSGESSSASDGEIIMP GGHLKRNELIAMLNTLPVEITFVDKDNINRFFNEGPKVFKRPQMAIDREVFSCHPPKVEP MVRMIIGNFRDGKEDEVPIWMEKGGKPFLVRYMAVRDKEQNYVGTLEAVTDMTEVKEHFR QYFKSHPEEL >gi|333758476|gb|AFIH01000001.1| GENE 1266 1258845 - 1259393 215 182 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229236145|ref|ZP_04360568.1| acetyltransferase, ribosomal protein N-acetylase [Chitinophaga pinensis DSM 2588] # 13 182 8 178 181 87 30 2e-15 MVFEEKSMKDKLGRSVVFRNARPEDAEDLIQYLKITSAETPYLVREPEEITITKTKEEQF IRDKMDAERELMLVAFMDGKHIGNCSLMSIAPYKRYSHRCEIAIALYKEYCGFGIGKAML QIVLEFAKNVGYEQVELEVMAENKDAIHLYEKLGFEKYGTFPDNMKFADGSYMDAFWMMK KL >gi|333758476|gb|AFIH01000001.1| GENE 1267 1259530 - 1260396 904 288 aa, chain - ## HITS:1 COG:no KEGG:Rumal_2536 NR:ns ## KEGG: Rumal_2536 # Name: not_defined # Def: hypothetical protein # Organism: R.albus # Pathway: not_defined # 75 285 28 236 546 63 26.0 9e-09 MKKNLLKHTLLITALSALSITACSSKTAKESSIVSPTEAAKESSSANPGDVEKESNKTDS EDTEKESSAPNPTEFGATAEEKEKAQNNSDAPLVGAYNTNLASFSMKDNPDAMSAFEAAF PNGYNYTHYEPIALLGTQVVSGTNYLYLCKSTWTDYQENVSFVLLQIYQDLSGKSEVMGS AILFPTEESREEGEDYIDNTGSYLPENIPAIQNAFKEAVPDNENASYIPLAYIGKHTQEG KPEEDVIFTAKKSKGKDAKTNYVLLYIGKDKDGKAKLVKTEDVQFPDF >gi|333758476|gb|AFIH01000001.1| GENE 1268 1260808 - 1260927 80 39 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTNDKTNSCILYLGLKEKNKLFLEVSHAGKIYSAIYNDR >gi|333758476|gb|AFIH01000001.1| GENE 1269 1260887 - 1261882 691 331 aa, chain + ## HITS:1 COG:FN0971 KEGG:ns NR:ns ## COG: FN0971 COG3177 # Protein_GI_number: 19704306 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 1 328 1 330 330 303 47.0 3e-82 MPERYIPPFTMTDEITNLVIEIAEITGAMTVSEQLSKNPKLRRVNRVRSIHSSLAIEQNS LTKEQVSDIIDGKRVLGPPQDIREVQNAYEAYEIMTKLNPYSVKDLLKAYKIMMGGLVKE AGVFRSKGVGVYAGEQLIHAGEQLIHAGTPANYVPSLIGQLFDWLKKSNLHPLIKGCIFH YEFEFIHPFVDGNGRLGRLWHTLILAKWQEFFLWIPIETIIHKRQDDYYKALNASNAVSE STIFVQFMLLLIRDLLKELSHNGVMNKEKTLDEKLFGLLKENGKQSAAELAEIVGSSPRT VQRALKRLTDDGKIEHVGSNRFGHYVIKQGL >gi|333758476|gb|AFIH01000001.1| GENE 1270 1262042 - 1262509 282 155 aa, chain - ## HITS:1 COG:no KEGG:Cphy_1020 NR:ns ## KEGG: Cphy_1020 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 17 142 295 421 421 93 37.0 3e-18 MQWGLQHAEELVNPHKPNLVILGFGMNSMQEHADDYQDTIMSIIQIVRKKNPNCEFVLVS PMIPNPDILSFQNNQLLDQQKALYKISDNIDGVCVAPVHSVFQELIAHGKNYLELTGNCI NHPNDFSVRIYAQTILEVLNPHGESNTLKPGNSAR >gi|333758476|gb|AFIH01000001.1| GENE 1271 1263506 - 1265278 653 590 aa, chain + ## HITS:1 COG:BH3447 KEGG:ns NR:ns ## COG: BH3447 COG2972 # Protein_GI_number: 15616009 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein with a C-terminal ATPase domain # Organism: Bacillus halodurans # 49 582 54 598 602 158 26.0 3e-38 MKVFHSFTSKILAIMLILLLFFCAVNTFAWYRSFTREAIETAQTHLDSLIETLNETFDEN LREIDYTTAFISNKVHSSQNNCIVQFLTAKEANVRFLSFQQARNYLFNRCNFKAYISGIS IYGFDGRVCTYGITTPYDEVSQTEWFSQIQSGKEDVIYLAPHAYTSKRPSPHSSYVFSIV RPVFNNGTIIGVIKADVKSSLLETIFDIQEMQGYVLYVFDQDTGEAIYVPKKSDNLILDH FQASIPHGHGSYIDKIGDVDCLVVYTTSRTTPWQIVGVVSQNAVISGFLQVRNRMLLLVI ICTVLFAIIAFILSYYMTKDLRNLTKAVEKISDETLELEVRISKKDEVGKLYHRISAMLV RLRTLIDNTRKVEEEKRRSEILMLSMQMNPHFLYNTLHTIKVLSIMQGVENIQTVTDALS RMMHLNLDVRKLISVAEEENYLLDYLQIQKYRYAGKFSYSVSIEEEAKIRFVPKLLVQPI VENALQYGIAKSQTLGILQIRIFLEQEKLHILVRNSGPGFPPELLNNQKYCGGISKHIGL QNITRRLQLLFGDEADIRILSGEQLLTSVELILPELLESEVECDANINCR >gi|333758476|gb|AFIH01000001.1| GENE 1272 1265445 - 1266842 489 465 aa, chain + ## HITS:1 COG:BS_yesS KEGG:ns NR:ns ## COG: BS_yesS COG2207 # Protein_GI_number: 16077768 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Bacillus subtilis # 256 464 550 759 761 89 28.0 2e-17 MDGLELQETILQKYPNILLVMLSGYDELNYVRKALKNGAVDYILKHELNTPVLEQILSTV EKQMQRTHVLEDNSVDSQMALKRNFMMKLMSGGFRSEEEITSHAEVLELKLGLRNISVIL MQVEPRKCNMIASYLLENSILNIVDEVLQDYHAGICCHVSDDKYVFLICYDGINSSLMRL EKCHEVFARIRTCLQSYLNLSVEFYMGQTVTTAVQIPKSYLSAEQKYDSRFFSDTVSLEE ISQPFDIFSVFDATREKQLVASIRQNYSVQTQEILKEVFEELSRMRPTSDMFKNFMLDLL SILSRAWIERGIDLSKFYQSEEPQRVFNSFRNLNMALKWFKNLNDLAFEGADKKKCPDSP YVEQAIGLIRRHYAEDISQTYVADLIGISAAYLSRLFREDLDTGFADYLCSYRIEKAKEL LNTGGYSNKDVSRLSGFHDDAYFARAFKRCTGMTPKLYRKTQKQV >gi|333758476|gb|AFIH01000001.1| GENE 1273 1267009 - 1268373 853 454 aa, chain + ## HITS:1 COG:SP1897 KEGG:ns NR:ns ## COG: SP1897 COG1653 # Protein_GI_number: 15901724 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Streptococcus pneumoniae TIGR4 # 85 345 62 314 419 75 26.0 3e-13 MRKILALLLTLVMFMSLIACGVKQEKNTSQETTVINEGNNEKTSHSEELAEIPTVTMLTF TDWYKSGWEALSAYIDEHAEELGFRLKIDIIAGGGEGEELVRAKFATGDLPDLLQTYGPK WLDHNAGVLDHIVPLQNVDISEYSQDQLKEGHYIYNDQLYAVPMDSTSLVGIFYNKDVFA AAGINTVPTNWEEFLDCCEKLKAIGVTPLYYSGADTWTLQCITHFGFNEDVEKSGLSYTD FWDEMNTNKRHYSEAINFKNAIIMSKEMIDKGYVNSSFLSDTYDMAQTALAEGTAAMYCN GTWVYDEIAGKYPQAANKIGSFILPLYKKNYTCSSMPGSIVMTTSCKDQVLGEKVLNFLA SSEAQQIYATAQPGIYLNKKVSCELPEAYQTLYDEMLKGNSMEVWQNGNVYHYGDYHIHV QDYLAGGMDINQVIELLDSDTADNAKAANDLNWK >gi|333758476|gb|AFIH01000001.1| GENE 1274 1268405 - 1268836 182 143 aa, chain + ## HITS:1 COG:no KEGG:Pjdr2_3837 NR:ns ## KEGG: Pjdr2_3837 # Name: not_defined # Def: binding-protein-dependent transport systems inner membrane component # Organism: Paenibacillus # Pathway: ABC transporters [PATH:pjd02010] # 29 132 6 108 291 68 35.0 6e-11 MECMHSIYSYTQKGDVHLKQKNLSRYKIKSPYPYSLVIPAFLVYAILYVIPAASGFLLSF FNIKTFKISSFTFAGIENYATVLRNPYFSVAIKNTLLFAVFTTLGKLALGMSLALLVNNR FRGVNYMRTVFFCLLYLIMSLLD >gi|333758476|gb|AFIH01000001.1| GENE 1275 1268848 - 1269351 94 167 aa, chain + ## HITS:1 COG:mlr7001 KEGG:ns NR:ns ## COG: mlr7001 COG1175 # Protein_GI_number: 13475831 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Mesorhizobium loti # 6 159 154 308 317 115 36.0 5e-26 MMHPIGLINRTLTGIGLETFTQNWLTNPKIAIFSCAFVEIWKWTGYTMVILLAGLQAIDS TYYEAAELDGANRRQKFYFITLPLIMPSFNNAVVISIVGGLKVFDIVQSLTNGGPGNATS VFGTLIYSSFSSGNYGRGCAASMILTIFVLLIALPTNRFLSGKEVEL >gi|333758476|gb|AFIH01000001.1| GENE 1276 1269348 - 1269887 121 179 aa, chain + ## HITS:1 COG:Cgl2406 KEGG:ns NR:ns ## COG: Cgl2406 COG0395 # Protein_GI_number: 19553656 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Corynebacterium glutamicum # 15 178 39 210 304 82 33.0 4e-16 MKKYGDMFRSALGLILSLFMLVPFIMIILNSFKTKKESAELGLEFPKQWNFRENYSVVMS SGILHAFRNSCFVTCLSVLLIILVSAIAAFVLQRRRTKLSKKLITFFVIGLIVPGQIIPT YMLCSFLHLKTFFGAAAVLTAANIPLGIFLYIGALKSISRDIDEAAILDGCDSLSLFFS >gi|333758476|gb|AFIH01000001.1| GENE 1277 1269938 - 1270159 77 73 aa, chain + ## HITS:1 COG:no KEGG:Pjdr2_3838 NR:ns ## KEGG: Pjdr2_3838 # Name: not_defined # Def: binding-protein-dependent transport systems inner membrane component # Organism: Paenibacillus # Pathway: ABC transporters [PATH:pjd02010] # 1 73 204 276 276 85 53.0 9e-16 MNIWNDFGTTIYFLNTSENYTLPLTIYNFFSTHSSDWNLVFTDVVLVSLPIVILYFSAQK QIMSGMTSGAVKG >gi|333758476|gb|AFIH01000001.1| GENE 1278 1270533 - 1270814 214 93 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MHPLAIFRADDPSKAPDPEDESVLFFEPGIHHIRTLELKSGQTLYLSPGAIIVPKQPDKL DAILEERDWAGKTNYQDFIFLMDKRTFMFLVPV >gi|333758476|gb|AFIH01000001.1| GENE 1279 1270853 - 1271608 292 251 aa, chain + ## HITS:1 COG:AGl619 KEGG:ns NR:ns ## COG: AGl619 COG5434 # Protein_GI_number: 15890426 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Endopolygalacturonase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 217 136 354 453 72 26.0 1e-12 MVFTSCENISISDVIFIGAAHWTLPFFGCKNIYVDKVRMIAYRENSDGIDLVDTQYAVVK NCFLRTGDDAVSLKSMACTSQLETHDILVQRCTVWNDKVRAFGVSGESRSNIYNAVFEDC DVVQSMADWTVEVGALAIYICDAAEVHHITFRDIRIRQESNYAICCMITLDKWSKDRKAG QIHDIIFDQITMPENYLIYLSGYSKINCIKNIYFDNIFTLPDLVRQTRSNIYRHLDQATY VKLHKINGEVI >gi|333758476|gb|AFIH01000001.1| GENE 1280 1271861 - 1271944 56 27 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLDDFHLLYIEYLHLLEEFLQKKMKNL >gi|333758476|gb|AFIH01000001.1| GENE 1281 1272343 - 1273206 88 287 aa, chain + ## HITS:1 COG:no KEGG:Pjdr2_2569 NR:ns ## KEGG: Pjdr2_2569 # Name: not_defined # Def: Endopygalactorunase-like protein # Organism: Paenibacillus # Pathway: not_defined # 2 238 216 446 448 86 28.0 1e-15 MWKCGNISVNNVKIINPKYACSDGFDIGNSHNVTFNHMFIRSCDDSIAIKGTGNYGYNVA ENPAITQANYAISVCNTQVWCDTNNALGIGAETVAAYYDNIQFKNIDILYNYDDLTYPDQ FKERSALNICALNATNISNITYEDIRLEKGKQLISVTMPNDFWFGSMKGNWNWNGSFSRI TYRNIVSYSDGSNVIQLFGRDSRHTVSDILFDNIKVNGSIIDLDSPLFKTNKYTKRVRFC RNGIITQEKMDHSELMFIMQHLSFRKDIKGGINGFIARGLMELAMKI >gi|333758476|gb|AFIH01000001.1| GENE 1282 1273203 - 1273613 157 136 aa, chain + ## HITS:1 COG:no KEGG:BBR47_17720 NR:ns ## KEGG: BBR47_17720 # Name: not_defined # Def: extracellular serine protease precursor (EC:3.4.21.-) # Organism: B.brevis # Pathway: not_defined # 1 132 1603 1728 2580 84 34.0 2e-15 MIWNSDGSYHWRGSHNYDAIWMYNNTLYIHPDTDQSMLEWEAPYAGTVQIDGNVRKYSTL GGDGVTVSIWKNNTLVWPQDGWRTIPYNDNVGLSYDFAFDVSRGDILSFRVDEGGDNAYD TTIWDANIVYNSYRSY >gi|333758476|gb|AFIH01000001.1| GENE 1283 1273558 - 1274442 519 294 aa, chain + ## HITS:1 COG:no KEGG:SpiBuddy_1577 NR:ns ## KEGG: SpiBuddy_1577 # Name: not_defined # Def: glycoside hydrolase family 43 # Organism: Spirochaeta_Buddy # Pathway: not_defined # 18 293 6 284 294 280 51.0 5e-74 MTQQFGTQTLFTIPTDLIRIRDPFIVADHTSMLYYLFGTTDKDPWKGKGEGFQVYRSRDL KLWSEPEFIFYPPKGFWGVKNFWAPEVHYYRNAWYLIASFYADGKHRGVQIFKSTAVTGP YSPISSGPVTPEDWDCLDGTLFIEENSPWLVFSHEWTQIQDGAICAIRLSDDLSTAIGEP FTLFHATDAPWSVADTGDVIITSGKNYVTDGPFLFHDKGRLKMLWSSFAKSGYAIEIAES MNDKLEGPWKHQNQPEFSFGGHGMIFETFSGERYLALHAPNIAGKERLTLVALI >gi|333758476|gb|AFIH01000001.1| GENE 1284 1274671 - 1275981 725 436 aa, chain + ## HITS:1 COG:CAC2686 KEGG:ns NR:ns ## COG: CAC2686 COG0366 # Protein_GI_number: 15895944 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Clostridium acetobutylicum # 2 425 3 435 451 390 45.0 1e-108 MWSDSSIFYQIYPLGFCGAPKENDGVLVPRIRKVIEWIPHLKRLHVDAVYFSPVFESDRH GYDTRDYQKIDCRLGSNADFSEVCKILKENGIRIVLDGVFNHVGRGFFAFQDVLLKRWDS EYKDWFYIYFDGNSCYNDGFSYEGWEGHFELVKLNLDNPKVKEYLFSCVKAWMEEFQIDG LRLDVAYCLNENFMRELRHFCDSVKPDFLLLGEILFGDYKRIVNDAMLHSCTNYECYKGL YSSFNDLNLFEINYALNRQFGKDNPIYRGMHLLSFADNHDVTRVASILKEKRHLPLLYAM LFTMPGIPCIYYGSEWGIIGIKENGSDDALRPSLAEPQWNELTDWISAFAKVHKEQKALV YGDYKSIVLTNRQLIFQREFEGERIWVSVNADEQAYQAQFHGMGNCEVTDLLSGEKLFLN DSFTLPPFSFFMWKLA >gi|333758476|gb|AFIH01000001.1| GENE 1285 1276091 - 1276879 635 262 aa, chain + ## HITS:1 COG:HI0003 KEGG:ns NR:ns ## COG: HI0003 COG0561 # Protein_GI_number: 16271979 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Haemophilus influenzae # 2 260 4 258 262 138 35.0 1e-32 MRVIFTDMDGTLLNEQHRISERTERILKKWTEEGNHLVLSSSRGVSGILPVIERYRLDAA VIALGGAVILDHSKKLIYERGMSRKEMQEVVQFAEANFPDATWNVYTARHWIVKDLADPR VVKEASIVEVEPTGMDLSVLHEAEQIGKVLLICDSNQIDSIENALKERFPKLNICKSAKT MLEVNACGTSKGQAAEIYCKENHFELKEAIAFGDNFNDLSMLKAVGIPILMGNAPEELKK QFRRLTSDNNHDGLAEALEKIL >gi|333758476|gb|AFIH01000001.1| GENE 1286 1276876 - 1277517 520 213 aa, chain + ## HITS:1 COG:SP0860 KEGG:ns NR:ns ## COG: SP0860 COG2039 # Protein_GI_number: 15900744 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) # Organism: Streptococcus pneumoniae TIGR4 # 3 198 2 198 214 247 61.0 9e-66 MKKLLLTAFTPFDGERINPALEAVKLVKDKIGNLEIVKLEVPTVFGKSIETVREAIEREK PDFVLSIGQAGGRAEITPERIAINLDDARIPDNEGNQPIDEPIFPDGENAYFSTLPVKAM VEAIRKEGLPSSLSNSAGTYVCNHLMYGVLYYLDKRPSMKAGFIHVPYIPEQVKDKKEMP DLPLSDIVRGLEAAIQAVEENELDLKKAFGSEF >gi|333758476|gb|AFIH01000001.1| GENE 1287 1277662 - 1278960 945 432 aa, chain + ## HITS:1 COG:BH0081 KEGG:ns NR:ns ## COG: BH0081 COG2966 # Protein_GI_number: 15612644 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus halodurans # 18 260 8 251 251 119 29.0 1e-26 MQNPDLRDQKEMHNIDELETVLYAGNLLLSSGAEIYRAEETMSRIAESMRIKDLDAYVTN RGIFASGNVPGKGIETRIMSIPDKELNIDKIEAVNELSREVCSGTVDLLYLRSSLQKIAN MGEQKVSERILSYFLGAGCFSYAIGTSFRDSLCAAIIGSLVGFYMIWSKYRIKSRVLITI IASVLTALLSNLFVAVGLGAQLSFIIIGAMMDLVPGVAFVNSVREFSQNNFATGQTLLTS ALLSCVSMASGVALVELMVSGTIMTPSVIYDIPEISYTVLLIRSLAAGLGTIAFALMFRV RRRHFIDCGVMGTITWLMYMLCIRIWNNEAIAVFVSGFSAVLASRVLAVLRRCPATVFLM TSLIPLLPGISLYRSIYYLLMGSAQISMHFGKLCFLTAFTIAVSIAIVQQIPRNWTVPTG IFRKSKEGKLPS >gi|333758476|gb|AFIH01000001.1| GENE 1288 1279053 - 1279553 399 166 aa, chain - ## HITS:1 COG:BH1234 KEGG:ns NR:ns ## COG: BH1234 COG2426 # Protein_GI_number: 15613797 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Bacillus halodurans # 28 158 1 131 134 68 32.0 5e-12 MESFITFFTQELRGYLSRESIVFILSMLPVIELRGGLIAASLLKLPYIQALCLSIVGNIL PIPFVLFFFSKLVVFLEKFSYTKPLANWFRKKVENNKEKIEKYDFWGLTLFVGIPLPGTG AWTGAMVASLLKMNRKKSGIAILLGILLAGAIMSIVSYGVLAKVVA >gi|333758476|gb|AFIH01000001.1| GENE 1289 1279726 - 1279878 228 50 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIDFEKEIQRFKPSLDVDQLEDAILKVDLTDMNDLMTQLIEDAMKKGNTQ >gi|333758476|gb|AFIH01000001.1| GENE 1290 1279875 - 1280834 728 319 aa, chain + ## HITS:1 COG:no KEGG:Closa_1558 NR:ns ## KEGG: Closa_1558 # Name: not_defined # Def: TPR repeat-containing protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 284 1 296 440 266 49.0 7e-70 MKYDVTLERIANCYYNLGLERARLRDLSGAAELLKKALHYDKYQKEARNLLGLIFFEMGE VADALVQWVISMNLLPEDNIADYYLDEIQRKPAILRICSDNVKRYNQALDYAQHNNADLA VFQLNQVIADSPNYVKAHILLALLYMKRNDWVKAGKSLYLVLKIDRNNPKALVLMDIVKK NTGRAEIEQNRLKNVFSHRKMMDDDVMMPQEIKQLSPWSVSLLLLLGAVIALFVYYLLML PAGIRTANAKNNQVLITYTEKLDAANQKLSNLEEENKKSSRAMMKQRQIWIATRIKMPPL WRSIKAWSTSIMHCPREIF >gi|333758476|gb|AFIH01000001.1| GENE 1291 1280774 - 1281175 346 133 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227872617|ref|ZP_03990951.1| ## NR: gi|227872617|ref|ZP_03990951.1| conserved hypothetical protein [Oribacterium sinus F0268] conserved hypothetical protein [Oribacterium sinus F0268] # 1 133 301 433 433 209 81.0 5e-53 MAQYQSLVNINNALSTGDILTAAEAYTKLDQSTITDESLQNMLSSVKSQMEGNVYLRLQE MGTAAWNSGRTDEALQYYTWSVKIRREAENLFLLARLQQTVGNTAEANQNFDAVVGEFPS SPYAERARNARGY >gi|333758476|gb|AFIH01000001.1| GENE 1292 1281175 - 1281840 685 221 aa, chain + ## HITS:1 COG:no KEGG:EUBELI_01628 NR:ns ## KEGG: EUBELI_01628 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 1 131 4 134 135 69 32.0 8e-11 MLKKSKIIAMTKLAIYEKHKGEEALEITKYYREDYISNRILQGVIRYTAIFILLLFMYLL MQGEELLYKMSFVFLVGLGRKIVILYLMGLTFFVAVFLLFSYFTYEKALEERQKVEQGLE EILSLSQGSKEPKRPEEKEKVGGNAVQYARKEVQDIVLQMKREGEKLDFTPLYSRDREGK ESTGKKTSQPGNTVTKKKPVEKALNKKSGDWLDAADDWLDE >gi|333758476|gb|AFIH01000001.1| GENE 1293 1281850 - 1282737 664 295 aa, chain + ## HITS:1 COG:no KEGG:Cphy_3552 NR:ns ## KEGG: Cphy_3552 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 1 294 1 295 353 124 27.0 6e-27 METLRQYRENLQKIYGKNDYWMVPIFRSLFSMTFLFFLSRYLQMTGKLGNPMVILSLGLL SFFLPFSFVPCLSGIFLLYYFYTQSILLLGVGALFFVFIFIIQSSVRGKYAILIVAMPLC FFFRIPYFLPLLMGLTMGLSAVISLDLGILVYYFLRYIREYKDKFSTGGDLVEQLDAFSG NLAPFIKNKELFLVLLLFTLAALAIFVIRNFSFNYSFETALAIGLCLEATAFILYPAVGM KMNLTGELLSFLLSALLSIVALFFWHDADYRGTEFVQFEDDAYYYHVKAVPKKKA >gi|333758476|gb|AFIH01000001.1| GENE 1294 1282770 - 1283615 798 281 aa, chain + ## HITS:1 COG:BH0265 KEGG:ns NR:ns ## COG: BH0265 COG1624 # Protein_GI_number: 15612828 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus halodurans # 14 264 7 259 274 198 44.0 1e-50 MNLITKMRGWVSLLPSFSFTGLLEIAILSALIYIILLWIKNTKAWQLLKGILIIILFTAF AVFFHLTTIVWLIERLSTAAIIAIVIIFQPELRKALEQLGSKNLISQFRAGERKAYTHIN QELIAACSVMSENKTGALIVLEQMQSLEEIEKTGIYVDGIVTAALLINIFEKNTPLHDGA VVISNGRISSATCYLPLSDAEISKAYGTRHRAALGISENSDSITLVVSEETGRISVAVEG KLHRVKDAEGLLKYLPKEEDGEEKKSFLTQLFAIGRKKEEE >gi|333758476|gb|AFIH01000001.1| GENE 1295 1283612 - 1284766 1097 384 aa, chain + ## HITS:1 COG:no KEGG:Closa_1249 NR:ns ## KEGG: Closa_1249 # Name: not_defined # Def: YbbR family protein # Organism: C.saccharolyticum # Pathway: not_defined # 14 326 15 331 434 179 38.0 2e-43 MKYFKNNLALKLFSIGLALLLWLIVFNVSNPEQKGSRTVELNILNRDAFSADNKTWEIDR NTVTVSYTVRSNMASSVQASDFNAYIDLKDYSITGAVPVYVELKNSENSSVIQDIVAKPS VVRVSVEDLQIKKFTLTTNRRGKEKDGYVVSSIHTEPETIYATGPESSIGRISSIGILIN VDGLSENTSGKEKAVFYDANGKTIDSLENVTLSQSEIDYTIVVNKKKNLKITSSTSGNPQ SGYSLSGIEISPSTVSVSGNESLLESVTAISLPAIDVSSANTDVKKEFSIVDYLPKGISL AEPNSTVTVTAKIQKNEETTKESTVKEESESTTEESKTETTAESSTEETKESKETKESKE SKEGKESKESKSSEEKQTKDAEKE >gi|333758476|gb|AFIH01000001.1| GENE 1296 1284763 - 1286076 596 437 aa, chain + ## HITS:1 COG:no KEGG:Closa_1252 NR:ns ## KEGG: Closa_1252 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 7 419 1 419 430 265 39.0 4e-69 MKTVKVLSVYSVVYFLAFVVKTQGLSLLSSFLFLFLAVFLYCVEKKEEKNSLPLCGLFAL GLLGGEGIAVLQLSRLSLPWSNTMWLSLYLAYFCFYLAYHLFPYIVSFPEKRERERSAGQ DAKFLKRCILFLLGISYLSFSIEAISLGYIPLFTENTPHAYSYFHLKGLHYFTTLFVLVP MLLPCLYKLEKKIGLFSYMSFFLSLLLPILLVSRYQLIFSILLFLFSLLLEGYRPKWRKV AVLFLFLGVCYVVLTIERAHSVSYLLDIFEMKNRNIPIVLVQPYMYVANNFENLNLLTLN LAAHSNGFRMAYPFLTLSGLKFFIEFPLAYPLYLTKEELSTLTILYDAYYDFGLLGVVLF SAVLGGMGEILYALQSVKKNPFLSGIVAQFSFYLLFSFFTTWFSNASSIFYFGVSIFFAI LWQRKEEKRTKQGKEKK >gi|333758476|gb|AFIH01000001.1| GENE 1297 1286073 - 1287173 917 366 aa, chain + ## HITS:1 COG:BS_ytvI KEGG:ns NR:ns ## COG: BS_ytvI COG0628 # Protein_GI_number: 16079968 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Bacillus subtilis # 9 347 10 358 371 90 25.0 4e-18 MKKILLLSYRICFPIAITAIFLILLPRVLLFFLPFTLGAVLALLSEPLIRLGRKAFPFLK KDQLSVLVILLLFLLFATLLYLLILLGLPFVTKKMAGFPEYLLSIKEMSLETLETLRNFL PESFRGVFLDLPNKMESFGKNLLKNWSSPALRLSLHFVSGLPELLLYFVLTILSALSFVK DGGKIVEGLKTLVPHSFRHYGELLREDGKKILKGYILAQFEIMFCVFLLLALGFSFLKVP YGIFLAFLTAFLDALPVFGVGFIMWPWMLMLLLQGRFVLFLALLVLYILSQMIRQFLQPK IIGEAIGLPPILALLFLFLGYKFYSLSGMVLALPVGMLLLRFYHYGAYDGLFQSAKELRE VLLEYL >gi|333758476|gb|AFIH01000001.1| GENE 1298 1287191 - 1288606 945 471 aa, chain + ## HITS:1 COG:SP1402_1 KEGG:ns NR:ns ## COG: SP1402_1 COG0144 # Protein_GI_number: 15901256 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA and rRNA cytosine-C5-methylases # Organism: Streptococcus pneumoniae TIGR4 # 107 312 63 280 280 171 43.0 2e-42 MLGNSQKIPEEFLDRMRKLFPEEEEWERFLASLSEKPKRGLRLNLQKLKKAEKAGFSFEK WKEAWKLEPLFPEKEEMDFPQREEMDFSENREYLVCEEQSGCRVEIGRDPYHEGGLYYIQ DPSAMEVVSGMHIRPFDRCLDLCAAPGGKSLHMADRLDGHRGGFLLSNEYVGERARILSQ NAERMGYSNLCVVNESPQNLAEKYPGFFSRILVDAPCSGEGMFRKSEEAVADWSPELVEK CVLRQKEILKEAFLMLREGGELAYSTCTFEEAENEGIRKWILEENPDYQFLGEKRLYFHH AKGEGQYYAYFKKAGQDLEEKKQRTEYSILKKNKSIFLYPAFLSVFQDLKLFRLGIRIFE EGKNGWEYSHGLSHALNLEEILPIVEEQRLEKKYKLLYGIYLTREDKRIEDYLYGNEIPI AEEELQVLLPGKMAEKSGMGILYCDGIPLGFGYYRNGRLRNYYPKGLRYRK >gi|333758476|gb|AFIH01000001.1| GENE 1299 1288761 - 1290125 1032 454 aa, chain + ## HITS:1 COG:AF2217 KEGG:ns NR:ns ## COG: AF2217 COG4799 # Protein_GI_number: 11499799 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) # Organism: Archaeoglobus fulgidus # 5 454 36 514 516 284 37.0 2e-76 MDSKARSRIEALLDAQSFVEIGALVKSRSTDFLQGTEKAASDGVICGYGSISGKPVYIYA QNRDVLSGSVGEMHGRKIAHLYDMAMKMGAPVVELLDSSGIRLEEATDALYALSKLYKKK AQAKGLIPLYSVLYGQAGGGMALLASLSDFCFMENQEGRLFINAPDAVKGNKDASFSEGK AQEEAGNVDFSGTEEEIVKELQKAFTFLPANNEDAAYNEDADDNLNRAVDGFFDLKGREA LTILSDEGEIFEVKRAYGEEAVTAFIRLNGQTVGGIATNGGALHWKDIAKMNRFIRFCNT YSLPILTLCDTTGFENCLCNEKHLGTEMAELLSAYGNASVPMVTVVKKAVGSTGACLGSK GVGADLVFAYPESEISVMEPGLAANILYPDESLEEREAKAKRYLEEKASAESAAARGYID ALIFPEETRQRVISALDMLYGKADFDFHKKFGSI >gi|333758476|gb|AFIH01000001.1| GENE 1300 1290137 - 1290736 419 199 aa, chain + ## HITS:1 COG:no KEGG:Closa_1325 NR:ns ## KEGG: Closa_1325 # Name: not_defined # Def: sodium pump decarboxylase gamma subunit # Organism: C.saccharolyticum # Pathway: not_defined # 1 192 5 195 256 70 26.0 3e-11 MKKIKRIFILLSVLLFSAFLLSCSKKEEESTSVSAEEASGLEGVITNYFQQIEAQDDEQL EESINSAYKAKEELFYNALSNYKNTKKDLGEFQEIEKVDVKKEGDTYVVDLHAKYAKREL IFHAALHDDYSGFSELSFNPVYSLSEKLFAAFQNMIVGMGTVFAVLVFIAWIISLFAHLH RWEVRQAEKRRKEMERAVR >gi|333758476|gb|AFIH01000001.1| GENE 1301 1290679 - 1290942 246 87 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227872607|ref|ZP_03990942.1| ## NR: gi|227872607|ref|ZP_03990942.1| conserved hypothetical protein [Oribacterium sinus F0268] conserved hypothetical protein [Oribacterium sinus F0268] # 20 87 196 265 265 71 51.0 2e-11 MGSPTGGKKKERDGKSSSVAPSPVAISPEKPAVPVLEKEEGISEELLSVILMAAVKAYEE DFAKKNPYSDARTLENGLFVRSIKRRK >gi|333758476|gb|AFIH01000001.1| GENE 1302 1290952 - 1291329 512 125 aa, chain + ## HITS:1 COG:VNG1532G KEGG:ns NR:ns ## COG: VNG1532G COG4770 # Protein_GI_number: 15790515 # Func_class: I Lipid transport and metabolism # Function: Acetyl/propionyl-CoA carboxylase, alpha subunit # Organism: Halobacterium sp. NRC-1 # 2 121 488 607 610 76 38.0 9e-15 MKEYTITVNGVAYDVTVDEKGNGGASVAPAVAPVAKAAAPAATPAPAQKTSQAGNISVTA PMPGKILSIKVKEGDSVHSGDVLLVLEAMKMENDIVAPKDGTVVSINTKVGDSVESAQVL IGLQG >gi|333758476|gb|AFIH01000001.1| GENE 1303 1291349 - 1292497 1210 382 aa, chain + ## HITS:1 COG:SPy1177 KEGG:ns NR:ns ## COG: SPy1177 COG1883 # Protein_GI_number: 15675149 # Func_class: C Energy production and conversion # Function: Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit # Organism: Streptococcus pyogenes M1 GAS # 3 380 1 376 376 360 56.0 2e-99 MNIVETFLNLLEQTAFFSLSYGNYLMICVALIFLYLGIAKGFEPLLMVPIAFGMLLVNIY PDIMLSPEKSINGTGGLLWYFFRLDEWTIFPSLIFLGVGAQTDFSPLIANPISFLLGAAA QFGIYAAYFFAIFMGFNGAAAAAISIIGGADGPTSIFLCNKLGQTALLGPIAVAAYSYMS LVPIIQPPIMRALTTKEERMCRMEQLRPVSKLERILFPIVVTVVVCLLLPTTAPLVGMLM LGNLFKESGVVRQLTETAANAMMYIVVILLGTSVGATTSAEAFLNLDTLKIVLLGLIAFA FGTAAGVLLGKVMYYLSGKKINPLIGSAGVSAVPMAARVSQKVGAESDPTNFLLMHAMGP NVAGVIGTAVAAGMFMAVFGVK >gi|333758476|gb|AFIH01000001.1| GENE 1304 1292511 - 1293908 1680 465 aa, chain + ## HITS:1 COG:FN1376 KEGG:ns NR:ns ## COG: FN1376 COG5016 # Protein_GI_number: 19704711 # Func_class: C Energy production and conversion # Function: Pyruvate/oxaloacetate carboxyltransferase # Organism: Fusobacterium nucleatum # 1 441 1 441 448 532 57.0 1e-151 MAKVKITETVLRDAHQSLIATRMPSELMEPILDQMDEVGYHAVECWGGATFDACLRFLKE DPWERLRMFKRHFKNTKLQMLFRGQNILGYNHYADDVVEYFVEKSIANGIDIIRIFDCLN DIRNLETAVKACNKEGGHAQIALCYTLGDAYTLEYWENLAREVENLGADSLCIKDMAGLL LPKQATELVEALKKGTKLPIEMHTHYTTGMASMTYLKAIEAGADIIDTASTPFAMGTSQP STDVMVAALQGTEYDTGLDLDKLIAISNYFQPYREECIKSGLLSTKVLGVDVKALKYQVP GGMLSNLISQLHQAGKDDKLQEVLEEVPRVRKDFGEPPLVTPSSQIVGTQAVMNVIAGER YKMVPKESYKLVAGEFGKTVKPMNPEVVEKILKGEKQMTDRPADHIAPQLKKFEEEAKEW TRQPEDVLSYALFPQVAKDFFEYRNAQSTGVALSAADKANKAYPV >gi|333758476|gb|AFIH01000001.1| GENE 1305 1294008 - 1294121 121 37 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNERKLYKKYLILFIDIILNQFNFFATFSQCILEEFR >gi|333758476|gb|AFIH01000001.1| GENE 1306 1294185 - 1295879 1416 564 aa, chain + ## HITS:1 COG:SA0905_3 KEGG:ns NR:ns ## COG: SA0905_3 COG4193 # Protein_GI_number: 15926639 # Func_class: G Carbohydrate transport and metabolism # Function: Beta- N-acetylglucosaminidase # Organism: Staphylococcus aureus N315 # 289 439 14 165 165 66 35.0 2e-10 MTQFTAVAAERAALIKGSIVNIRSEANVNSKKVANLFSNTNVTVGDSVKNSNGESWYPVT FSSGKGYVRSDFIKFPVQYQRNEQFENDLNQQGFPESYKEGLRSLHAEFPNWRFQGFKTN LNWNDVLDGEMEGTGSLVDKNAISSWKSTDAGKYDWNSGTWPGFDGPTWVGASRALTAYY MDPRNFFDESYIFQFLLHNYNPEEQTKEGLNSILKGSFMDGGASTQAIQSTTQGSEVSSD AVITDTASSGENAIVSAGGPGEFLSGNESTTAEASETSSGNVSGIDYSAIIMKAAEASKQ NPYVLAAMILQEQGKGSSGSISGASGLYNYFNVGAYAANGMGAVERGIWYAGQSGSYGRP WNSPEKSILGGAQFFSENYMNAGQNTLYLKKWNVQGSNLYKHQYMTNVQGAAEEGAKLSK AYSSEMKQKALTFSIPIYENMPNEKAAIPTGTGSPNNRLSSLSVSGYTLSPAFSGDKQAY TVTLANGTKSLTVNASAIDGKAQISGAGYQSLDGKDSINVSVRAENGSERVYTIKINYGN VSSSGGGGSESGVEIVEVGKGPLN >gi|333758476|gb|AFIH01000001.1| GENE 1307 1295895 - 1297130 1200 411 aa, chain + ## HITS:1 COG:no KEGG:Closa_1330 NR:ns ## KEGG: Closa_1330 # Name: not_defined # Def: cellulosome anchoring protein cohesin region # Organism: C.saccharolyticum # Pathway: not_defined # 24 150 31 157 620 114 44.0 1e-23 MMIKVKYIVFSLLFGMLFSFTVLAADGQLSFSDPTANVGDTISLNMKVRSDTPLSRADIT LRYDSNVLQFISGTDTDGGAGTIRVHGSGTQGENNALVYTIQFKALTAGVSSVSVEKQEV YSQDESLLNLTHVGSSKVSVNGASSTESSAEESTASSEESTEADKETVNEGVKLTAKDKS ITIMNPGSDVQIPAGFLESTIDVDGHQVKGWVWKAESEHQYIILYGMNDAGDLSFYRYDL KEKTIQRYFQDPLEAEQKKNAENYPGLLGKYDTLVGKYNIQFILSSVFGFTTLLFIVLSA FLWQERNRLKRIISFQKEGIHGRELRPNVEDISMEELSFDENKEEDELDHTKMVSVVHKA IPENDLEDEDLGATRSISIKEEDLKRRNEKKVKHEDKPEDADDPELEIEDL >gi|333758476|gb|AFIH01000001.1| GENE 1308 1297215 - 1297373 101 52 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGIGFSPLVHIIFKYNTYDCCVMLYNDLYGIKGMFFPIEKNRKVHKEYKGLG >gi|333758476|gb|AFIH01000001.1| GENE 1309 1297378 - 1299834 2293 818 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 3 814 5 814 815 887 54 0.0 MNQFTIQAQRALQLAIEVAEECRHQYIGTEHILLGLVREGTAVAGKVLKANAISEDKIME MIAKFISTDGKLSVADPSGYTPSAKRVLEQAMQESRDSGSRLVGTEHLLLAILKDGNCVA SRIISTLGASTQKIYSQLNTAMGRDQFVEDKGEKDRSGRVSQTPTLDQFSRDLTALARER KLDPVVGREREIMRMIQILSRRTKNNPCLVGEPGVGKTAVVEGLANRIVAKDVPEIIEKK RLLTLDLSAMVAGSKYRGEFEERIKRVISEARNDGEVLLFIDEIHTIIGAGGAEGALDAA NILKPALARGELQIIGATTLEEYRKHIEKDAALERRFQPITIDEPSEEESIAILRGIKEK YEEHHKVSIDDAAILAAVKLSSRYINDRYLPDKAIDLIDEASSKLRITHSGEPKGIKRLR EQLMELEIEKEDCIRKEDFEAASLIKKKQEQKKKRLDKELEEWKKEREENKLHVTETDIA NIVSDWTRIPAKKLSESESEKLKNLENLLHTRVIGQNEAVHAVAQAIKRGRVGLKDPKRP IGSFMFLGPTGVGKTELSKALAETVFGSEQNLIRVDMSEYMEKYSVSKMIGSPPGYVGYD EGGQLSEKVRRNPYSVILFDEIEKAHPDVLNILLQVLDDGHITDSQGRKVSFKNTIIIMT SNVGAEQIISPKKLGFDSPADQGDKDYKYMKTKVLEELKHLFKPEFLNRVDEIIVFRPIS KEDMSQILEILLKNLYARAKGEMNLGISLDKKAKSFLIEKGYDPKFGARPLKRTIQTEVE DLLSEAILDGNVIPGEKVNLRVDKSGEALRTSVRKEKV >gi|333758476|gb|AFIH01000001.1| GENE 1310 1299837 - 1301210 964 457 aa, chain + ## HITS:1 COG:BS_sms KEGG:ns NR:ns ## COG: BS_sms COG1066 # Protein_GI_number: 16077155 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATP-dependent serine protease # Organism: Bacillus subtilis # 1 452 1 452 458 465 50.0 1e-131 MAKSLSRFFCKECGYETIKWLGQCPSCKRWNTMVEAPKELPEKNRAFSRNTTGARAEVKQ LKDIVLLEEDRLTTGYAELDRVLGGGIVTGSLLLLGGDPGIGKSTIFLSICLNLGKQGKK VLYVSGEESLKQIKLRAERMQKAEGEIYFLSETNLKHIAESVEDLEPDFLVVDSIQTMFL EEVSASPGSVSQVRDCTAALLRIAKEKGIAIGIIGHVTKDGNVAGPKILEHMVDAVLYFE GEKNTQLRILYGQKNRFGSTNEIAVFTMEASGLEEVRNPSEFLLSGRAVSSAGSVVSSAV EGTRPLLMEIQGLLVPTAFGIPRRTANGMDYNRLTMLLAVVERNLGIECSRFDAYINITG GMRISEPAVDLAVILALLSSYRNIPIAEDIMVFGEVGLSGEVRAVSQSRQRVEEAKRLGF KRIVLPSYHLQKDNYNVQGVQLIPVKNIREALTIFKS >gi|333758476|gb|AFIH01000001.1| GENE 1311 1301474 - 1302334 709 286 aa, chain + ## HITS:1 COG:SP2113 KEGG:ns NR:ns ## COG: SP2113 COG1284 # Protein_GI_number: 15901928 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pneumoniae TIGR4 # 19 280 46 308 313 155 30.0 7e-38 MKIDLKEDGKRLIGVIAGGLLMALNLKTFVSAGGLLPGGANGLTVLVQRIALSYFNISIP FSLVNITINLIPIYIGFRYVGKKFTFFSLIMLLVTGFFTDYLQLGPITSDKLLISIFGGI MNAVAITLCLWVDATSGGTDFIAIYLSERKGVDTWNLIFNFNATILLVNGYLFGWDKALY SIIFQYVSTQTLSALYRNYQKLTFFIITDYPHEIAAGIHEVCHHGASILKAEGAYAHQEK SMVYSVISSMDARKVKMKIKEIDPKAFINTVHSKDIMGRFYMKPKD >gi|333758476|gb|AFIH01000001.1| GENE 1312 1302463 - 1302873 307 136 aa, chain + ## HITS:1 COG:CAC0418 KEGG:ns NR:ns ## COG: CAC0418 COG0546 # Protein_GI_number: 15893709 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Clostridium acetobutylicum # 4 129 2 127 216 110 39.0 1e-24 MGKYQNILLDLDGTILDSGPGIKKSVQYALDHFSLYHQPEEKLRRFIGPALTDSFMRVYG FSTEQAEEALSYYREFYPTNGIFDASLYPGMEECIKTLAEHGKKVILLTAKPIFFAAQIT KHFRISDYFFWKSERS >gi|333758476|gb|AFIH01000001.1| GENE 1313 1302951 - 1303100 229 49 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227872520|ref|ZP_03990858.1| ## NR: gi|227872520|ref|ZP_03990858.1| 5'-nucleotidase [Oribacterium sinus F0268] 5'-nucleotidase [Oribacterium sinus F0268] # 1 49 165 213 214 72 71.0 1e-11 MVGDTKYDIDAAKEVGIDSVAALYGYGSPEEIASANYSIQKPLDLLSLV >gi|333758476|gb|AFIH01000001.1| GENE 1314 1303171 - 1304229 1294 352 aa, chain + ## HITS:1 COG:BH1209 KEGG:ns NR:ns ## COG: BH1209 COG0715 # Protein_GI_number: 15613772 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components # Organism: Bacillus halodurans # 109 287 83 263 336 62 25.0 2e-09 MKKRMALVLLSTAVMLGMAACGGKKPEKETTQAVTTEMTTEKAEATTEKAEESTEEAKTE MESALKVISLKGPTSIGLVHLMEKAEKDNLPYSFQMEASPDALLPEFVSGKADIATVPAN MAAVLYQKLNKDLYVLNINTLGVLYGVSGNAEVKAFSDLEGKTYFSTGQGASPEYLMNTL LKKNSIHANAEFYTDVTEIAAKLKENPEAVAILPEPFATATLLQNSALERKFSLTEEWNK IFPGTELPTAVTIVKKSFYEENKDQVEAFLKEEQESIEAVEKDMDTTAALMVKYGILEKE ELAKKAIPNCNVHFIDGENMKKDLEQYFTALFAEDPKSVGGALPEADFYFMH >gi|333758476|gb|AFIH01000001.1| GENE 1315 1304237 - 1304980 354 247 aa, chain + ## HITS:1 COG:AGl927 KEGG:ns NR:ns ## COG: AGl927 COG0600 # Protein_GI_number: 15890580 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 10 244 25 257 269 69 27.0 4e-12 MKKRLQKLIILCFWLLIWELFTRLVNNSFILVGPLETVRHIVILMGRASFTGILYFSSVR ILSAYFLAFLLALVFAFIAYRYPFFESLIQAPLFLLRSLPVASFVIILLFFLGRGSLSFF ISFWMSFPVFYFNFLEGLKNLDRDILEMAKLFRFSLWNCFRYIFIPGIYPQILSSAKLAM GLSWKSGIAAELIGQVRQSIGYQLMDAKVSLEMGDVFAWSIIMIALSKFFEWLVLFLLKK IFSKGSV >gi|333758476|gb|AFIH01000001.1| GENE 1316 1304980 - 1305576 426 198 aa, chain + ## HITS:1 COG:lin0924 KEGG:ns NR:ns ## COG: lin0924 COG1131 # Protein_GI_number: 16799995 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Listeria innocua # 13 163 16 170 240 82 34.0 6e-16 MVLSIEKGTKAYGNQVLFQDFSCELDFLKHPIYRITGESGKGKTSLLRILSSLETLDSGT FSIVMGEAARGGNRLRASWMFQENRLLENLSAVENLSFIPSGYTISEIAYFFENLLSGEN KEKRVSEFSGGMKRRLAFLRAMIADFEILFLDEPFTGIDEENRLKMEHFFLEHIGKRPMI FASHEDPLLWKNYGRIEL >gi|333758476|gb|AFIH01000001.1| GENE 1317 1305725 - 1305823 164 32 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNAMVTLTVIIILVGIIVLDSSDCLRNASFER >gi|333758476|gb|AFIH01000001.1| GENE 1318 1305896 - 1307542 1663 548 aa, chain + ## HITS:1 COG:CAC3169 KEGG:ns NR:ns ## COG: CAC3169 COG0028 # Protein_GI_number: 15896417 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Clostridium acetobutylicum # 1 548 1 552 554 546 50.0 1e-155 MKLKGARILIEELIRQGVDTVFGYPGGAVLNIYDELYQCRDRIHHVLTAHEQGAAHAADG YARASGKVGVVIATSGPGATNLVTGIANAYLDSVPLVAITGNVATEALGRDSFQEVDIVS ITQPVVKHNFMVKDVSELEQTIKEAFLIANSGRKGPVLIDIPKDVQVNECEYGVAVLPKM PEKAELPYDEEGVIKLLNSAKKPFIYAGGGIIACGGEDCLRAFAEKLNAPVAVSMMGRTA FPDSHPLSLGLVGMHGSYQAAKVQSECDLMLAVGVRFSDRATGNLSAYTKNCKIIHVDID KAELGKNLPPDFSVQADVKKWMKSVLPKLKERKNTEWWKEIESYKKVTSLEKDAFHPKNI LETVRRFTKDETVVATDVGQHQMWTAQYYRFEKPGTFLTSGGLGTMGYGLGAAIGACLAK KKEETVLITSDGSFSMNCNELCTTVKEGLPITIVLLNNQVLGMVRQWQTAFFGERYSATI LDRGTDFVKLIEAYGGKGFSIHKLSELEKALEERKNIAGPVLLDCHIDKDEKVLPMIPPG KSVAEIIL >gi|333758476|gb|AFIH01000001.1| GENE 1319 1307552 - 1307803 319 83 aa, chain + ## HITS:1 COG:MA3791 KEGG:ns NR:ns ## COG: MA3791 COG0440 # Protein_GI_number: 20092587 # Func_class: E Amino acid transport and metabolism # Function: Acetolactate synthase, small (regulatory) subunit # Organism: Methanosarcina acetivorans str.C2A # 3 74 2 73 161 66 47.0 9e-12 MKKFTIDLFVNNRFGVLNRITGLYCKRGYNIESIQAGPTEIPNCTKIEIVSTGDEYMRMQ VISQLEKLYDVRKVELKSVTDLE >gi|333758476|gb|AFIH01000001.1| GENE 1320 1308041 - 1309054 1053 337 aa, chain + ## HITS:1 COG:Cj0632 KEGG:ns NR:ns ## COG: Cj0632 COG0059 # Protein_GI_number: 15791992 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Ketol-acid reductoisomerase # Organism: Campylobacter jejuni # 1 333 1 334 340 419 62.0 1e-117 MAVMYYEKDCDQSLLRGKKVAVIGYGSQGHAHALNLRDSGVDVVIGLYDGSKSAAKAKED GFTVLNTAEATKQADIIMILVNDEKQAKLYKEEIAGNLSKGKTLAFAHGFNIHYHAIVPP TDVNVIMVAPKGPGHTVRSQYVDGKGVPCLVACEQDPSGNSMDIAKAYAAAIGGARGGIL ETTFREETETDLFGEQAVLCGGVCALMEAGFNTLVEAGYKPENAYFECVHEMKLIVDLIF NAGFEGMRYSISDTAEYGDYTAGPKIIGEEVKNAMKKILSDIQDGSFAKDWILENQAGRP HFLAMREAKLNNLVSETGRDLRNKMGWKQVQDLDQAR >gi|333758476|gb|AFIH01000001.1| GENE 1321 1309072 - 1310268 1164 398 aa, chain + ## HITS:1 COG:TM0356 KEGG:ns NR:ns ## COG: TM0356 COG1171 # Protein_GI_number: 15643124 # Func_class: E Amino acid transport and metabolism # Function: Threonine dehydratase # Organism: Thermotoga maritima # 3 397 2 397 401 343 52.0 3e-94 MELTLDRVYQAAHVLKPVINRTDLVHATRIEADCDLYLKTENLQNTGSFKIRGAYFKIST LSEEDKKKGVVACSAGNHAQGVALAATKAGTKSTIFLPAIAPISKVEATRNYGAEVRMID GVYDDAYNAAVEYQKESGAVFIHPFNDIDVMAGQGTIGMEIMEQLEDADAVVVPVGGGGL ISGVSFVVKKLNPKCKVYGVQAQGAASMVQAVADKKLESLEEVHTFADGIAVKSPGNLSY EMVREYVDELVTVSDDEIAAAILTLMEKQKIVSEGAGAVSVAAVLFNKLPLKGKKVVCII SGGNIDVNILSRVISRGLLKTGRKASLTLSLLDKPGQLEEVSRIIAELGANVTKVDHNMN VEDSDINGCYLTLRIETRNFAHIEEIKKRFREEGFSLV >gi|333758476|gb|AFIH01000001.1| GENE 1322 1310279 - 1311373 968 364 aa, chain + ## HITS:1 COG:MA3792 KEGG:ns NR:ns ## COG: MA3792 COG0028 # Protein_GI_number: 20092588 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Methanosarcina acetivorans str.C2A # 1 363 9 370 564 342 47.0 6e-94 MTGANAIVKCLELEKVGYVFGYPGVAICPFFDSLESSEINSVLVRSEQNAAHEASGYARI SGKPGVCAVTSGPGATNVITGIATAFADSIPLVVITGQVESRLLGSDVFQEADICGACES FVKYSYTLRNAEEIPRVFKEAFHIAMTGRKGPVLIDIPIDVQKASLRKFQYPDELKMRTY KPTVQGNPVQIKRMFQRLQNVKRPILCVGGGVLLANVAKKVRDFSHRFNIPVVSTMMGLG TMQDLDPLYFGMVGNNGRSYGNKAMNKAELIIMMGARVADRSISQPDLITENKTLIHIDV DPAEIGKNAGPEIPLVGDLSSVLDSLLAVKEELSYTEWIEELNGFKEEAELLVEKKKKKS CIPL >gi|333758476|gb|AFIH01000001.1| GENE 1323 1311358 - 1311939 512 193 aa, chain + ## HITS:1 COG:TM0548 KEGG:ns NR:ns ## COG: TM0548 COG0028 # Protein_GI_number: 15643314 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Thermotoga maritima # 5 191 365 542 584 140 38.0 1e-33 MHSALVNPHYFLRELNLALKDNAIYVADVGQNQLWSCKHYKMKEGRFLTSGGMGTMGYSL PAAIGAYFAVQEKCNTGKEEAGREIVAVMGDGAFQMSLMELATMRQYGARVKLIVFHNGV LGLVRQYQRTAYKDHFSMIDLTGNPDLSLLSGAYGLSYTSISNNSAVPERIREFLGKEEN GILEVFVDANEVA >gi|333758476|gb|AFIH01000001.1| GENE 1324 1311939 - 1312430 412 163 aa, chain + ## HITS:1 COG:sll0065 KEGG:ns NR:ns ## COG: sll0065 COG0440 # Protein_GI_number: 16331478 # Func_class: E Amino acid transport and metabolism # Function: Acetolactate synthase, small (regulatory) subunit # Organism: Synechocystis # 1 156 17 172 188 120 42.0 2e-27 MKRIYSVLVENRSGVLAKVAGLFWRRCFNIDSLTVGETEDSAVSNMVIVSSGEERTLEQV EKQLNKKLDIIKVRTFTENQGLCRELLMVKLRYKRDNRKDIMENCQIMGAKISDLSKSQM IIEMCDTPERINMFLDTLKTVSILECARTGTLAMLKIAEGENK >gi|333758476|gb|AFIH01000001.1| GENE 1325 1312516 - 1312884 340 122 aa, chain + ## HITS:1 COG:ECs5220 KEGG:ns NR:ns ## COG: ECs5220 COG0251 # Protein_GI_number: 15834474 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Escherichia coli O157:H7 # 2 120 16 138 141 139 59.0 2e-33 MKVVSTSNAPAAIGPYSQGFVVGNLLITSGQIPVNPENGEIPGDITSQAEQSCKNVKAIL EAGGSDITKVVKTTCFLADMADFATFNGVYEKYFTSKPARSCVAVKTLPKNVLCEIEAIA EI >gi|333758476|gb|AFIH01000001.1| GENE 1326 1312885 - 1313340 409 151 aa, chain + ## HITS:1 COG:no KEGG:SGO_0380 NR:ns ## KEGG: SGO_0380 # Name: not_defined # Def: hypothetical protein # Organism: S.gordonii # Pathway: not_defined # 1 148 1 149 150 98 38.0 6e-20 MKFYTYNYLLSRIEVTNWVQIVLIVLATSVLLFGVFKYYKEKKQSKYRELALIALFLVLI LVGIRINEAQEHKAVDDGYGTALRLIEELSETLAIPKEEIVINTQAARDGAIIRVPENRF FRVIYTDGKILLENMEIYNPQIEIIDAESTS >gi|333758476|gb|AFIH01000001.1| GENE 1327 1313337 - 1313969 564 210 aa, chain + ## HITS:1 COG:FN0036 KEGG:ns NR:ns ## COG: FN0036 COG2323 # Protein_GI_number: 19703388 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Fusobacterium nucleatum # 1 210 1 210 210 267 65.0 1e-71 MILSYVNIAIKLALGLISLIIVINITGKGNLAPSSAIDAVQNYVLGGIIGGVIYNSSIGI LQYLIILLIWICLVLSMRWLKTNSSFFKVAIDGKPVVLISRGKLDTEACRTAGLTAHEVM FKLRSNGIYSIKTVKQAVLEQNGQLIIVQSEEENPRFPLITDGTIQLQALDSIDKTEDWL MEKLKEQDVENISDVFLAEYENGNLNLVKY >gi|333758476|gb|AFIH01000001.1| GENE 1328 1313984 - 1316164 1701 726 aa, chain + ## HITS:1 COG:CAC1079_2 KEGG:ns NR:ns ## COG: CAC1079_2 COG5263 # Protein_GI_number: 15894364 # Func_class: R General function prediction only # Function: FOG: Glucan-binding domain (YG repeat) # Organism: Clostridium acetobutylicum # 499 614 2035 2154 2566 93 38.0 2e-18 MKCKFCGTEVDEKQRFCPNCGLLLDVSFTPFSVSDLQKKEKGTEEPEFLRQAIEYQEELE QEEKVEVTSHSEEGLSTSEDEMEREENAVLEEDIVEIQAVEASNLMRQVHEEEQSEVSDT EEEQTLENSLDSDAEKNSQIEDEESDTEENEAETAEEKEEAVEETEAAEETEDIKDAVEE TENTEDTENTEDIEETEKTEEIELTEATEEVADEATDEATDEAADEAEEKSVEAEDEAFE GKMEEEVPEEGEESNTEEEDSDALIYKIQDKQEEKEFFGEIPDDPDDFRENSAIPPTSMK ELKASMPSKKIVAATVAVAVLGFTGINYLNSTKVRYDSFLKKGENLLQAKQYSEAAESLE KDKESFQVDERYYLLLSDALSKEGKHEEAVACLMEGAKRFPENEEIQKTLKAMDPKVSSN ITEDLYHDSLEINLESSSNKILYSLSGGKDEILQEEYTGPISISRNGKYSLMAYAVASDG AKGELTIKEFTVDLDKEKYHLSSFVDSEKGKEYIDENGDKAIGWTLIDGSYYYFDEQGIM QTGFLELDGEKYYLDENGKMHTGCLDLDGKSYYFDEQGHMIRDAWIENRYYVDENGEMLK NQQNGEGVYFDENGNRSFNAESLYKEHPDSILAIVSKDRKTDGNHYLFSAKVYYHKKNGR PSGEVAYETEIVLSKSALMRYLDENLPIITAKDAVSFLPNLYLQEIVQNKDGVITSFSFV LGERHS >gi|333758476|gb|AFIH01000001.1| GENE 1329 1316166 - 1316348 217 60 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MINKELLLPFLLISFLFIVVLTIVLYKIMWMRLDAMIKKNKEDEERTGKSVLEQKTEENE >gi|333758476|gb|AFIH01000001.1| GENE 1330 1316483 - 1317058 634 191 aa, chain - ## HITS:1 COG:SA0373 KEGG:ns NR:ns ## COG: SA0373 COG0503 # Protein_GI_number: 15926089 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Staphylococcus aureus N315 # 1 175 1 175 192 194 60.0 1e-49 MKLLEERIKEDGQVRPGNILKVDSFLNHQLDISLLEQLGNEFYEKFKDKGITRILTIEAS GIALACLAAQHFKVPVVFAKKAKSKNLDGELYTSTVHSFTYGKDFTVTLAKKFLSEDDTV LLIDDFLAVGKAMRGLIDICNQADAKIAGIGIAVEKGFQSGGKELREAGYDVYSLAIIDE MTDDGSITFRS >gi|333758476|gb|AFIH01000001.1| GENE 1331 1317310 - 1317843 554 177 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227872500|ref|ZP_03990839.1| ## NR: gi|227872500|ref|ZP_03990839.1| hypothetical protein HMPREF6123_0778 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_0778 [Oribacterium sinus F0268] # 1 171 1 170 180 154 53.0 2e-36 MEKIHLPGGYDAVLEEFAKRNNVECNTAFLNLMDFIQLKDFSFSKVNILIEDPDAYLEDG KNIEEEELLLAFMESFGENTVGATVRGYYKRENHYLTLELDYEDALSCWEILSMFQRKIP SMELNEDVLYLFYVKDIEREHYSPKNFPYIAALDEEEEAYTKAGYFDSIYVEDEEEE >gi|333758476|gb|AFIH01000001.1| GENE 1332 1317851 - 1319143 758 430 aa, chain - ## HITS:1 COG:CAC2398 KEGG:ns NR:ns ## COG: CAC2398 COG0285 # Protein_GI_number: 15895664 # Func_class: H Coenzyme transport and metabolism # Function: Folylpolyglutamate synthase # Organism: Clostridium acetobutylicum # 23 419 22 422 431 240 35.0 4e-63 MTREESRKALCGSTDPIPERSDLQPLRVLLQRLGNPEKSLRIIHIAGSNGKGSVAVSLQN ILTLAGYKTGLHTSPHLESMNERFTIDGVQISDADYLRLSNLIRKELPLLPSMPNEFDLL TALAFLYFKEQNVDFLILEVGLGGRLDGTNVIEKKLLSIICHIGLEHTAILGNSLSEIAQ EKGGIILDGTPTVLMQQSDEVMQVIRKIAKEKNSKLILSNSRFLHSYPFYLDNGYQYFTY KDRKEYALSLLGDYQLDNAMVVCEAVDYLKSIGFRIPEDAVKLGLYTTEWKGRFEVLKKN PLIVLDGAHNPQAITAVVRSVEMLFPKYKKRVFFSVMQDKNYTEMLRILKNNSLSFTFFQ VDSVRGMDACALKELWEKEFDGEIHLAKSLEDGLQWNFENLRNEEGKALLLCVGSLYQVS GIRRYCRENL >gi|333758476|gb|AFIH01000001.1| GENE 1333 1319140 - 1319658 430 172 aa, chain - ## HITS:1 COG:no KEGG:Closa_1139 NR:ns ## KEGG: Closa_1139 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 8 145 17 154 178 95 38.0 1e-18 MTVKNWKTKKLISLSMLIALQIILTRMFSINAWNIRIGFGFVPMLFAILYFGTVEGILVA SLSDVLGSLFLSSYPYFPGYTFSLALSALIFGLIFKHGKGRLQIFFAVVLTQLICSLLLN SLWISINTGSALLPIMLSRLVQVGINGTMQFLTIHFMIFVLEKRFPMQEFTS >gi|333758476|gb|AFIH01000001.1| GENE 1334 1319895 - 1320260 216 121 aa, chain + ## HITS:1 COG:MA3263 KEGG:ns NR:ns ## COG: MA3263 COG1380 # Protein_GI_number: 20092079 # Func_class: R General function prediction only # Function: Putative effector of murein hydrolase LrgA # Organism: Methanosarcina acetivorans str.C2A # 7 102 13 108 165 62 33.0 2e-10 MDYFFTFVGEILNASLPLPVPAGVYGLILMLIFLMRGIIRLDEVEQAGNFLLETMSIMFL PAAVGTMTVSKLLLPVLFPYMVIILFSTFLVMAVTGLSAEFILRKTESKEDWEKEESEEK K >gi|333758476|gb|AFIH01000001.1| GENE 1335 1320257 - 1320952 467 231 aa, chain + ## HITS:1 COG:FN0468 KEGG:ns NR:ns ## COG: FN0468 COG1346 # Protein_GI_number: 19703803 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative effector of murein hydrolase # Organism: Fusobacterium nucleatum # 11 226 11 226 230 148 42.0 1e-35 MSQLISSADHFGFVLSIFIFLLAVQIKLRFKLELLNPLLVSTIIIIAILLTFKIPYDSYL EGADILNYFLTPATVCLAIPLYKQFSLLKNNFKAVFCAVLLGTISSLGSILLMGFFFKLP AEHIATLLPKSITTAIGLGISESISGYVNLTVASIVLTGIIGGILSDFVFKILPIHHPIA RGLALGTSAHAIGTAKALEMGEIEGAMSSLSIVLAGIFTVILVPIVYSIFL >gi|333758476|gb|AFIH01000001.1| GENE 1336 1321021 - 1322154 919 377 aa, chain + ## HITS:1 COG:BH1603 KEGG:ns NR:ns ## COG: BH1603 COG2866 # Protein_GI_number: 15614166 # Func_class: E Amino acid transport and metabolism # Function: Predicted carboxypeptidase # Organism: Bacillus halodurans # 75 361 67 339 355 131 29.0 3e-30 MRKKYCKPVYILCAALLFSTPVYADGPDLDDTEIVSSGPGMMIGNKEQEEAFSGNVSAET VPLLQGYGFSDYRVYGYNEMYDDLMALQKIYPSMHLDSLGKTIDGRELYHVVVGNPSAPK KILVHGSIHSREYIVTKVVMRELASLLEMEKKESSYQGNSIKHLLQNTCIHFVPMLNPDG VSLVQNGLNGIGSEELRKSVLEMAQKEHATHLSSYFRLWKNNLRGVNLNKNFDVNWEQTV DKKGYPSKDEYKGSSAESEAESKALADLQRKENFSATISYHTQGEVIYWYFGEGSYVEEA KKLAEIIKKNSNYRMVNSYRENYAGGFKDYMERKFNVPSVTVECGSGTSPVSEEQIDKIW AGQRGVLPDLLLEYKDS >gi|333758476|gb|AFIH01000001.1| GENE 1337 1322168 - 1322278 87 36 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKESWIWYFCPDRAKYCMDRAKYCMDRAKYLLARNE >gi|333758476|gb|AFIH01000001.1| GENE 1338 1322383 - 1324074 1576 563 aa, chain + ## HITS:1 COG:glnS KEGG:ns NR:ns ## COG: glnS COG0008 # Protein_GI_number: 16128656 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Escherichia coli K12 # 16 560 5 549 554 592 52.0 1e-169 MAEENRSVTEENKNTEPESKNFIENFIDEDLKEGRVKEIKTRFPPEPNGYLHIGHAKSIL LNYGIAKEYNGTFNLRFDDTNPVKEKTEFVESIRKDVEWLGADFENRMFFASDYFPIMYE KAVFLIQKGKAFVDDLTAEEIREYRGDYNTPGKESPYRNRSIEENLRLFTEMKEGKYQDG EKTLRAKIDMASPNINMRDPILYRVSHMSHHNTGDEWCIYPMYDFAHPIEDAVEGISHSL CTLEFEDHRPLYDWVVKECEFPYPPRQIEFAKLYLTNVVTGKRYIKKLVEDQVVDGWDDP RLVTIAALRRRGYTKESLAQFVKLSGISKAQSSSDYSLLEYCIREDLKLKKPRYMAILDP IKLIIDNYEGEGEVLSIPNNLENEALGEREVHFSKELYIERDDFMPDPPKKYKRLTMENE VRLMGAYFVKAVSYECDEEGNVTVVHCTYDPATKSGSGFTERKAKGTIHWVDAKTAFTAE VRLYEQLIDEEKGKLNEDGSLNFNPNSLTVKDCYLEKILESAEPLESFQFVRNGYFCVDC KDSTEGHPIFNRIVSLKSSFKMN >gi|333758476|gb|AFIH01000001.1| GENE 1339 1324108 - 1324467 514 119 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227872492|ref|ZP_03990831.1| ## NR: gi|227872492|ref|ZP_03990831.1| conserved hypothetical protein [Oribacterium sinus F0268] conserved hypothetical protein [Oribacterium sinus F0268] # 1 111 1 111 164 155 81.0 9e-37 MAKKFGSFVFLAALTGAVAGVVSYLYKYRKFSEAVDQDFTDVVDSAMEVKDSAKRSYTIL KDSRTKEDFKTVAKDLGYAAKNLAIDTKNLAVDAGKDAYKAVKEAWDKKKRYFPMMKMQ >gi|333758476|gb|AFIH01000001.1| GENE 1340 1324618 - 1325097 414 159 aa, chain + ## HITS:1 COG:CAC2942 KEGG:ns NR:ns ## COG: CAC2942 COG1854 # Protein_GI_number: 15896195 # Func_class: T Signal transduction mechanisms # Function: LuxS protein involved in autoinducer AI2 synthesis # Organism: Clostridium acetobutylicum # 1 158 1 157 158 209 59.0 2e-54 MEKIASFTVDHIHLLPGVYVSRKDKVGEETVTSFDLRFTRPNVEPAMETAPMHAIEHLAA TFLRNDAEWKERILYFGPMGCRTGFYLLLKGDLESRDIQELLLSCFSFISDFEGEIPGAT EHDCGNFRDMNLPVAKWWSKKYCQDVLQHLSYDNTHYPA >gi|333758476|gb|AFIH01000001.1| GENE 1341 1325247 - 1326440 908 397 aa, chain + ## HITS:1 COG:MTH52 KEGG:ns NR:ns ## COG: MTH52 COG0436 # Protein_GI_number: 15678081 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Methanothermobacter thermautotrophicus # 5 394 4 408 410 435 54.0 1e-122 MGMKVNHHYQEVKESYLFAEIAKRIREWQEKNQDKASQLIRMGIGDVTRPLPREVVKALK AASDEMGIAESFHGYGPEQGYDFLREEIQSYYKRFSVCLEKEEIFISDGAKSDLGNILDL FDRGITALVTDPVYPVYVDTNIMQGNTILYARAGEENGFLPMPDPSVKADLIYLCSPNNP TGAVYDRVGLAAWVNYAKAQNAVILFDAAYECFVEGDLPHSIYEIPGAKECAIEFCSFSK KAGFTGTRCGYTVVPDKLVFSGQSLRKMWLRRQTTKFNGVSYIVQKAAAAVFTEQGEKEI LENIQYYKENAKTIMATLDSLGIYYTGGKNSPYVWMKCPDGMDSWSFFDKLLNEVYVVGT PGAGFGEAGEGFFRLTAFSTHEKTKEAMKRLKTLLGR >gi|333758476|gb|AFIH01000001.1| GENE 1342 1326588 - 1327025 304 145 aa, chain - ## HITS:1 COG:no KEGG:Closa_0416 NR:ns ## KEGG: Closa_0416 # Name: not_defined # Def: cell wall binding repeat-containing protein # Organism: C.saccharolyticum # Pathway: not_defined # 48 145 15 135 763 62 31.0 5e-09 MQYFISYFFVKEAAYEKMIVLIGWAFLLSVTAALPCFAEENNTVGYGGSTTTAPDSYGHW VLSRDGSWSFISNDTGSPMYGWIVSKHQWYYIAANGRMVIGWQKINYETYYFSEKSVENQ PLGSLYMNKFTPDNYRVDSKGIRAD >gi|333758476|gb|AFIH01000001.1| GENE 1343 1327162 - 1327554 487 130 aa, chain - ## HITS:1 COG:SP2136 KEGG:ns NR:ns ## COG: SP2136 COG5263 # Protein_GI_number: 15901950 # Func_class: R General function prediction only # Function: FOG: Glucan-binding domain (YG repeat) # Organism: Streptococcus pneumoniae TIGR4 # 45 129 545 620 621 68 42.0 3e-12 MKKNILIAGIIAMLSTATVMPAFAEGKAVAWGGSTTDATESNGHWVTNSDGSWSFISNET GRPIIGWVVYKRQWYYMADNGHMVGGWVKLGFDWYYFSPNAVENQPTGSLYMNKLTPDGY RVDSNGRWVN >gi|333758476|gb|AFIH01000001.1| GENE 1344 1327860 - 1328147 459 95 aa, chain + ## HITS:1 COG:aq_2199 KEGG:ns NR:ns ## COG: aq_2199 COG0234 # Protein_GI_number: 15607129 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Co-chaperonin GroES (HSP10) # Organism: Aquifex aeolicus # 1 95 1 96 122 77 51.0 5e-15 MKLVPLFDKVVLEKEKMEETTKSGIVLPGQDDKEKPGQAVVVAVGPGGVVDGKDITMQVK KGQHVLFSRYAGTEVELEGKKYTVVKQSDILAIVE >gi|333758476|gb|AFIH01000001.1| GENE 1345 1328198 - 1329823 1562 541 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 [Haemophilus parasuis 29755] # 2 540 3 543 547 606 58 1e-171 MAKEIKYGVEARKALAAGVDAVANTVKVTLGPKGRNVVLDKSFGSPLITNDGVSIAKEID LKDPYENMGAQLVREVASKTNDVAGDGTTTATVLAQAIVTEGLKNLEAGANPIILRKGIK KAVEAAVESIQKQSSKVKGKDQIAKVAGISAGDSAVGEMVADAMEKVSKDGVITIEESKT MQTELDLVEGMEFDRGYISAYMSTDMEKMEANLDDPYILITDKKISNIQDILPLLEQVVK TGAKLLIIAEDIEGEALTTLIVNKLRGTFNVVAVKAPGYGDRRKEMLKDIAILTGGEVIS EEVGLDLKDATIEQCGRAKSVKVSKDKTTLVEGLGKKKEISDRIAQIRGQIEATTSDFDK EKLQERLAKLSGGVAVIRVGAATETEMKEAKLRMEDALNATRAAVEEGVIAGGGSAYIHA QAAVEKVVDKLDGDEKTGAKIVLKALEAPMYTIAYNAGLEGAVIVNKVKESKQNFGFDAY KEEYVNMMDAGIIDPAKVARTALQNAASVAASLLTTESVVADIKEPQPPMPQVPGGMGGM M >gi|333758476|gb|AFIH01000001.1| GENE 1346 1329863 - 1330033 167 56 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MENYIEHLVKGKRGTKEYMERGVAIALPFLFMFILSLLSLPIIFFVFYFLYRIIYG >gi|333758476|gb|AFIH01000001.1| GENE 1347 1330063 - 1330347 289 94 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227872481|ref|ZP_03990821.1| ## NR: gi|227872481|ref|ZP_03990821.1| hypothetical protein HMPREF6123_0760 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_0760 [Oribacterium sinus F0268] # 1 93 92 184 188 79 39.0 7e-14 MAGELSVDIVFHKSSRKKLLSVTKEELLEIRKWSPETLDRYKREGISVLDLAGFGENQHY FYLVEQEGKKTAYILDCPEKLIKEMRLYSRDKWL >gi|333758476|gb|AFIH01000001.1| GENE 1348 1330396 - 1332450 1306 684 aa, chain + ## HITS:1 COG:CAC1050_2 KEGG:ns NR:ns ## COG: CAC1050_2 COG0171 # Protein_GI_number: 15894337 # Func_class: H Coenzyme transport and metabolism # Function: NAD synthase # Organism: Clostridium acetobutylicum # 342 673 1 309 310 353 53.0 6e-97 MNDFVRVASVSPKVSVADPFYNVEEMLKWAKEAEKQSVSLLVYPELAVSGYTAHDLLLQE SLQKACAEAVGIFAEKTADSPVLFVFGYPFVLRGKLYNTAFAMQKGKILGIVPKKHLPNH SEFYEERYFQEGREEVEWIPDFLGKEEEWTPFGMHLHFTAENEARFRLAVEICEDLWVPN PPSVTHCLMGATVIANTTASDALIRKNDSRRALVQHSSGCLHNAYIYTSAGPSESTQDMV FSAHSMIAENGKILSESPRFYEGMIYSDIDLSVLWQERIKQNTFETTEDSAIQVSFPLYK ADYEAQGVSAPFSSEKRKKKISLKRFIHPMPFLPPLSGKDYERGEEILSIQVQGLKKRLN HIGAKKVILGLSGGLDSTLALFVCVECFRLMGYDLDHILTITMPSFGTSKLTRNNALECA RLLGTELREISIEDAVLQHFKDISYDETMRDVVYENAQARERTQILMDLANKEGALLVGT GDLSESALGFSTYNADHMSMYNVNCDVPKTVIPLVLRSFVKEREDAVEDSMDREKVGALK KIVEEIIQVPVSPELLPPDEKGEIKQKTEEILGPYVLHDFFLYMHLRYGFSAKKLFFLAC HAFSDENMQYYKREEKKTFSPKEILQCLKVFYRRFFSQQFKRSCMPDGPKIGRIALSPRG DLRQASDASSRVWLLELEEIEHSL >gi|333758476|gb|AFIH01000001.1| GENE 1349 1332594 - 1332689 152 31 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MHRIDSPANALLKEIRELSKKGKKEERKAFL >gi|333758476|gb|AFIH01000001.1| GENE 1350 1332704 - 1333357 232 217 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 [Bacillus selenitireducens MLS10] # 29 217 48 247 255 94 27 3e-17 MLRDLPLSSLVQIFISESYEGNLPHGLVKEDERVFLLSKKAMESISTTESQQGILAKIAI PKREEPEGDFYLILEDIQDPGNLGTIFRTAEAAGISHIFMNKTCTDIFSPKAVRSTMGSL FRVSFSIHEDLESICKMLKKRAVRIYAMHLSGENVFYQEDFRCPSAFMFGNEGNGLSESL TKLSDQLIRIPMQGQIESLNVATTASILMYEVYRQRQ >gi|333758476|gb|AFIH01000001.1| GENE 1351 1333461 - 1333739 231 92 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIGRSRGKVPNHKIDILYGVIALIIFIMSVMALGNPDENMVLFPFIFFFAFVLRIFVFIE RRMEEGKRKYIQLVIALVLLILSVVSGISLWT >gi|333758476|gb|AFIH01000001.1| GENE 1352 1333760 - 1334917 1462 385 aa, chain + ## HITS:1 COG:BH1376 KEGG:ns NR:ns ## COG: BH1376 COG0568 # Protein_GI_number: 15613939 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Bacillus halodurans # 93 385 80 372 372 342 66.0 5e-94 MEREEFEKIIEELMIKAKGNNNSIDMGEVQTAVKDLSLTEEQMENFLLLLENKGVEVTPV LDEDTLKKLEKGDEKEDSEDELLGLEDDDFTKDEEGEEIDLDAVDLLEGIGTEDPVRMYL KEIGTVPLLTAEEEYSLAMKKQAGDEYAKQRLIEANLRLVVSIAKRYTGRGMSFLDLVQE GNLGLIKGVEKFDPEKGFKLSTYATWWIRQSVTRALADQARTIRVPVHMVETINKMSKMQ RKLTLELGYEPSVKELAEHLDMTEEKVQEIMQIAREPASLETPIGEEDDSNLGDFVADAN VLSPEGNVESVMLREHIDSLLDDLKERERQVIVLRFGLEDGHPRTLEEVGKEFNVTRERI RQIEAKALRKLRNPVRSKRIRDFLQ >gi|333758476|gb|AFIH01000001.1| GENE 1353 1334923 - 1335582 225 219 aa, chain + ## HITS:1 COG:FN0521 KEGG:ns NR:ns ## COG: FN0521 COG1636 # Protein_GI_number: 19703856 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 3 215 2 209 222 174 45.0 8e-44 MEKKNYEFLMESILGEIKEESKPRLLLHACCAPCSTAVLECLEKYFAITVFFYNPNLETE AEYNRRAEECKRLLKEMKLPISCIVTNYAHEEFLQVARGLEKEPERGRRCTACFQLRLEE TARFAQKWNAEHSDKTFDYYCTSLSISPLKNAALLNSLGEEIGERYGIRFLPSDFKKKGR YLRSVELSKQYALYRQDYCGCEFSKAECLRRNKEKESIQ >gi|333758476|gb|AFIH01000001.1| GENE 1354 1335645 - 1335935 318 96 aa, chain + ## HITS:1 COG:ECs3061_2 KEGG:ns NR:ns ## COG: ECs3061_2 COG1925 # Protein_GI_number: 15832315 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, HPr-related proteins # Organism: Escherichia coli O157:H7 # 1 88 1 91 92 67 42.0 5e-12 MISAEVKIINESGLHLRPAGVLTQTCIRFKSEIILYYGERKIIGKSVLNVMAAGVKKGST VRVECNGIDEEEALKAVVEAISTGLGEGTSTPEPLF >gi|333758476|gb|AFIH01000001.1| GENE 1355 1336135 - 1336992 600 285 aa, chain - ## HITS:1 COG:FN2098 KEGG:ns NR:ns ## COG: FN2098 COG0489 # Protein_GI_number: 19705388 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Fusobacterium nucleatum # 37 255 14 229 257 236 52.0 3e-62 MAEQNNSSCSSHCGSCSANCPSRKSGIEKLPLGEGSSVKKVIGIVSGKGGVGKSTVCSLL ASAMNKEGFHVGILDADITGPSIPKAFGLLHDGVALSEDGKSMVPETSNGGVEIISTNLL LENETDPVIWRGSMIANAVKQFWQEVEWKEIDYLFVDMPPGTGDVPLTVFQSLPIDGVII VTSPQDLVSMIVEKAVRMAEKMNIPILGIIENMSYLLCPHCNEKINVFGESHIEELCQKE GLELLAKLPIDSQNASYMDAGAVEAIDTKESLKTAVACLKKLIQS >gi|333758476|gb|AFIH01000001.1| GENE 1356 1337096 - 1337860 736 254 aa, chain - ## HITS:1 COG:BH2712 KEGG:ns NR:ns ## COG: BH2712 COG0583 # Protein_GI_number: 15615275 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Bacillus halodurans # 1 230 45 271 296 102 28.0 6e-22 MKLFKRNSRGVSLTEEGEVLFRHVEEAIHHIEEAESALQKMKDYHIGHLDIGASTTLCRY VLLPYLKMFMEEFPNIQINLKNQDSAKNLQILEAQDIDLALVAIPKHLSPNQRVLLEQDV EDIFVASPKYLENLKALHGNNFSLFQDATVMLMDEKNVSRHYIDMYIRDNQLDFKQIIAL NTMDLLIDFAKIDMGISCVIRSFVEKDLENGSLVEIHLTSPIPKRKIGFMYHANNCSKSL ESFISFLEKRKGKG >gi|333758476|gb|AFIH01000001.1| GENE 1357 1338340 - 1339605 1467 421 aa, chain + ## HITS:1 COG:CAC3173 KEGG:ns NR:ns ## COG: CAC3173 COG0065 # Protein_GI_number: 15896421 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase large subunit # Organism: Clostridium acetobutylicum # 3 419 5 421 422 530 63.0 1e-150 MGMTMSQKILAKHAGLEKVESGQLILAKVDLVHGNDITTPVAIREREKIQGKGVFDKDKV VFVMDHFVPNKDITSAKCTQICRNYAKENGLKHYYDVGNMGIEHALIPEQGLITAGELSV GADSHTCTYGALGAFSTGVGSTDMAAAMATGELWFKVPNAIQVILKGKLQKYVSGKDVIL HLIGKIGVDGALYESIEFSGEGVSFLSMDDRFAICNMAIEAGGKNGIFPVDEKTIEYIKA HGNKPYTVYEADSDAKYERVIEIDLSTLQSTVAFPHLPENTHEIGTFDKISIDQVVIGSC TNGRLSDIAVSAELLRGRHVAENLRCIVIPATQKIYLEAMEKGYIKDLIEAGAVVSTPTC GPCLGGYMGILAPHERCVSTTNRNFVGRMGDASSEIYLASPEVAAASAVLGYIAGPKELG L >gi|333758476|gb|AFIH01000001.1| GENE 1358 1339841 - 1340347 511 168 aa, chain + ## HITS:1 COG:PAB0892 KEGG:ns NR:ns ## COG: PAB0892 COG0066 # Protein_GI_number: 14521550 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase small subunit # Organism: Pyrococcus abyssi # 5 164 4 163 164 197 58.0 5e-51 MENARGNCIKYGDNVDTDVIIPARYLAIQDRSLLATHAMEDIDKDFHKKMKKGDILIAGK NFGCGSSREHAPQVLKDSGVSCIIAESFARIFFRNAINIGLAIVESPDAAKEIKEGDEVE VDFSAGRIRDISSGKSYDMAVFPPFLQDMIDKGGLIAFVNESLEKNGR >gi|333758476|gb|AFIH01000001.1| GENE 1359 1340487 - 1342688 619 733 aa, chain - ## HITS:1 COG:BH1250 KEGG:ns NR:ns ## COG: BH1250 COG1609 # Protein_GI_number: 15613813 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus halodurans # 1 210 1 203 338 77 26.0 8e-14 MVTIKDIAKYAGVAQGTVSNVLNGKGNVSSEKIKLVMDAALTLGYIPNERAKFLRKGQSN LLGVILPNLRSKQYIDFYLSFKHYAESQNYSVLLELNNDNNRDTEINAIQQLRSYMACGI ATFTCFKNKNEITPYDIALDSSNSTNNILFVERKPDFSDVFIGFDYKKAGQELAKKAVEK NYHSICLLTGSLALANELDFYNGFMEIISKSTCYVNHVQTDIYRQKQNIIHIFNGKRLEA IFISNYGFAESVKDIYSSFHNSEKQLPIYAVSPLFTLPENDFIKYELNYSKLGNAAAKKL IKIISTPSSSSSFEILKETGFRDWFSHLTINMAKHPLHVLTLDDPSSYALQHLAHLYTKK TGVPVHISIYSYNEIYEAFNAMNKDSIFDILRLDVTWLSWFAEKILQPLEQIDSTIVEDM HSFIPNLSNHYSYVNGKLYCLPMTPSMQLLFYRKDLFESPVLKRTYWEQYKESLSVPCTF KEFNKVARFFTRAFNPDSPVQYGATLTLGSTGVASSEYLSRLFSHQKNLYNTENIVQLDS KTSIEAMQELIDLKDFSTTKNCNWWTDTASTFSEGDVAMAILYSNFASEILKSSSKVIGN IGFTLPPGNNPPIGGGALGISKYTEHPREALSFIRWICSEPVASAGTLLGSVSPCMETYD NYEITNYYPWLNLVKNSFNSVNGRRVPPSKLHPFDERKFLSILGMAVKNSLSGAQTIKEA LSKAQKLYQESFD >gi|333758476|gb|AFIH01000001.1| GENE 1360 1342991 - 1344364 1078 457 aa, chain + ## HITS:1 COG:TM1120 KEGG:ns NR:ns ## COG: TM1120 COG1653 # Protein_GI_number: 15643877 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Thermotoga maritima # 67 456 28 431 436 209 34.0 1e-53 MKKVKKVVALGLTSLIGMSTILSGCGGGNNSGTDTKAEQKAESTDKGANEAGDSGALHLT FYYPVNVGGSAAALIEKICSDFNAENKDIVVEPVYTGNYDDTVTKIQTAVQGGTPPDLFV SLATQRFTMASTGMAMPLDDLIASDDEGKSYIDDFLPSFMEDSYVDGKIYSIPFQRSTEI LYYNKDKFKEAGLDPESPPTNWDELLEDAKKLTNDNCYGVGIALNSGSAQWTFTGFSLEN SEKGKMLMSEDGKKVFFNTPENVEALQFWLDLQNKHKVMAEGVVQWTDLPTQFLAGEVAM MYHTTGNIANINKNATFEYGTCFMPGKKQFGAATGGGNFYISSGISEERVKAAWKFIKFA TATEKAAQWALDTGYVPTRKSCYETDMIKKYYEEVPQAKVAYEQLQYAKPELTTYNAAEI WRVLNDNIQSAVTGDVSAKEALDNAQTEAEGILEEYQ >gi|333758476|gb|AFIH01000001.1| GENE 1361 1344527 - 1345411 469 294 aa, chain + ## HITS:1 COG:mll1715 KEGG:ns NR:ns ## COG: mll1715 COG1175 # Protein_GI_number: 13471670 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Mesorhizobium loti # 9 293 21 306 307 179 37.0 8e-45 MSKRREKKEQIEALLLIAPALLFMVIFTVFPIFRSIYLSLCKYKMGMQVPEFIGLQNYQK LFTSKLFWKVMRNTIIFALITVVPSMLGGLGLAVLVKQKGKHIGFIRTAYFYPCVMPMIA IASVWMFIYMAKNGLWDQIVMSFGGKPMNVLSNKNTVLPAMAVMYIWKEAGYLMVFFLSG MQAISTELIEAAKIDGANSWLIFKKITIPLLAPTFLFVSTIAFTNSFKLVDHVVIMTEGA PNNASTLLLYYIYQQGFTNFNYGLSSALTVIMLVLLLVVSLPRFISQDKKIHYN >gi|333758476|gb|AFIH01000001.1| GENE 1362 1345423 - 1346253 670 276 aa, chain + ## HITS:1 COG:lin0761 KEGG:ns NR:ns ## COG: lin0761 COG0395 # Protein_GI_number: 16799835 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Listeria innocua # 4 275 5 291 291 160 36.0 3e-39 MHTKLMRNIKEFLVTILSILIALVWIAPLFWLVGTAFTKPSFKMTFLPNTAFTLDNLKYV WNAIPFGKYYINTLILVIVTFCVQFVTSTLAGYALAVKEFKGKTIIFAIIFMQIIIPNDV LITPNFMTLSDMGLTNTKLGIMLPFYGSALAIFLLRQHFKTIPKALAEAAKIDGANTWQT IWKVYMPTAKPAYMSFAVISVSYHWNNYLWPLIVTNSPANRTLTVGLAIFAKSKEANMQW ANVCAATFIIILPLLIAFFILQRQFMESFVSSGIKE >gi|333758476|gb|AFIH01000001.1| GENE 1363 1346262 - 1346945 298 227 aa, chain + ## HITS:1 COG:CAC0364 KEGG:ns NR:ns ## COG: CAC0364 COG1234 # Protein_GI_number: 15893655 # Func_class: R General function prediction only # Function: Metal-dependent hydrolases of the beta-lactamase superfamily III # Organism: Clostridium acetobutylicum # 3 157 2 162 167 85 31.0 7e-17 MKLQFLGIGAFCYPAFRNTSAYFVYKDNLIFLDFGETVFETVMKTLDLRAYRQIYIVLTH LHADHVGSLGTVLSYCNCILHRKPVLIHPQHNICALLDLLGIVPSFYSYHADFYGLVEGI SIEAIEVQHAQDMRCYGYKISCEDMCLYYSGDASDIPNIVLQDFLSRKIDDIYQDTSTIK EASASHLYYMHLEELIPMELRENVHCMHLDCDCREMLKEKGFSIAGE >gi|333758476|gb|AFIH01000001.1| GENE 1364 1347049 - 1348353 695 434 aa, chain + ## HITS:1 COG:PA5529 KEGG:ns NR:ns ## COG: PA5529 COG0475 # Protein_GI_number: 15600722 # Func_class: P Inorganic ion transport and metabolism # Function: Kef-type K+ transport systems, membrane components # Organism: Pseudomonas aeruginosa # 16 417 3 394 585 67 24.0 5e-11 MNSGFLLRIFNGRSSASDVIIPIALMLFSGFALTRVTKRLKLPNVTGYILAGILIGPFGL NLISDKLINGTGFIADIALAFIAFSTGEFFTFSTLKKNGLKVCIITFLEAALASIFVFVL SFSVLKMDFGFALVLSALASTTAPASTVMTIRQLGAKGDFVNTLLQVVALDDVFGLVAYS MAISLAVAGKSGSFQISAVVIPILVNIFVLILGGLFGALMKLLMPKNRSTDNRLIITIAL LFCFCGICALLDVSPLLGCMSMGTVYINITGDDKIFKQLNYFSPPILLLFFVRSGVNFKI DALFHQRGTITGASLLVVGVSYFLVRILGKYAGSFLGSALVGKKKEVRNYLGLALIPQAG VAIGLSALGARILGGEDGSALETVILASSVLYELIGPACAKLALYLSKSYAISLEERAKE AENKKKCRVASLVT >gi|333758476|gb|AFIH01000001.1| GENE 1365 1348326 - 1348592 192 88 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQSGELGNVRGIEQSLVGEKEVIFERKDVEKHHKFVDGKNRESNKSRNEVELLIARIQAI QQDLRRDAENISEEEKAFTEAAEEQCGA >gi|333758476|gb|AFIH01000001.1| GENE 1366 1348655 - 1349380 236 241 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764775|ref|ZP_02171829.1| ribosomal protein L16 [Bacillus selenitireducens MLS10] # 12 240 4 232 236 95 28 9e-18 MAESLMNLSRQNLIITKDISVFAVMLRLFTVVLLSSIIGFERASKRHSAGLRTFILVSFS SCMTMILDLLLMKNTNLHFPVLSAFALFSIATVSCRTILYSSRNQIKGLTTAIALWTCAL IGLSAGAGLYFICIIEFMMLLGILSYLPGLEQYLKNRSNHFEIHLELKSRQYLRDFVTTI RRLGLRIDDIERNSAYHGAGLSVYSVTFTIDSKELKKYKTHSEIIEALSTIDYICHIEEM R >gi|333758476|gb|AFIH01000001.1| GENE 1367 1349400 - 1349882 413 160 aa, chain - ## HITS:1 COG:no KEGG:EUBELI_00933 NR:ns ## KEGG: EUBELI_00933 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 23 129 230 337 370 73 37.0 3e-12 MESSLQIKKLELEEAEKSRTAKKLCLQYYLPSPVPVPLTLAPKNYLLEIKDKFLFLTVPL YQGELCYFFKNYKDYEFIPSEDRAVHKSLANMYPKEMREKAKASTAYQKMKTSFLPVFQE GEKVFKKTYQDKQCFIPFKENTFESINPVEYLLNFLSVLT >gi|333758476|gb|AFIH01000001.1| GENE 1368 1350157 - 1350612 271 151 aa, chain - ## HITS:1 COG:no KEGG:Closa_2239 NR:ns ## KEGG: Closa_2239 # Name: not_defined # Def: DNA polymerase B exonuclease # Organism: C.saccharolyticum # Pathway: not_defined # 31 132 23 124 364 73 39.0 3e-12 MEIIRKDLAYTEDRAALEVLLSPAFGNVSLEDALLYDIETTGLNPKASQLYLLGVLLFHK ENSEFIQYFAESVRDEEEILEQFFQLCKTKRVLISFNGEGFDNRFIETMAKSYGKLPLHL NLKQLDLFKLIRKRKNFTDWKVVLLNPVNGF >gi|333758476|gb|AFIH01000001.1| GENE 1369 1350747 - 1352108 1498 453 aa, chain + ## HITS:1 COG:mlr1394 KEGG:ns NR:ns ## COG: mlr1394 COG0845 # Protein_GI_number: 13471427 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Mesorhizobium loti # 19 418 22 425 430 98 25.0 3e-20 MKEEEKQGGDISEKVEKLLNEKPKKKKGKKKWIFLGLLLLFVLFILKNLLFPGKATGMLV NTESLSKADIQEKLSVSGPVSGTQSQHVTSALHAKVKEILVKEGDKVTEGQLIAKLDTKD VEEALEAAKTQVDLAKANKEDAQKNTKAEYAKVQTAYNNALLDFQRKSSLLESGDISQSE YEQAESALKDAKASLGSFKVSGGNVQVSESYDLQIKSAEEGLKKAQSAVDSAEIKAPISG TITRVNVEAGQFADNLQDGKPMFTVENLDQLELSISVSEYSIGKLSLGQKAIISADILGD EKLEGEVSSISPTGEAKGGNTAERVIPIKIKIDGDKKGLLSGITAKADIVLSEAKNVFVV PLSAVTTGEDGNSQIYFVEDGKIHIIPVKTGVESDVSVEVSPLKEDAAFKEGAHFVSAPD PSLTEGLVVSEMPKDSTGESVSASESGVVVKTN >gi|333758476|gb|AFIH01000001.1| GENE 1370 1352118 - 1352876 250 252 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 1 226 1 216 311 100 31 2e-19 MNDVLIELRDLVKIYDTGAVKVLGLNKINLQIKRGEFVAIMGQSGSGKSTLMNILGCLDK PTLGNYFLDGEDVAAMDPNTLNKVRNEKIGFVFQSFNLISRMSALRNVEIPMIYAHKKSP AARRERAAMLLEKVGLSGRIHHQPNEMSGGQRQRVAIARALTNEPPLILADEPTGNLDTA SSVEIMEMFSALHKAGATVVVVTHEENIAAYTDRMLRFSDGKLISDKKNENPTPVRDLSI FEGMYKGESHVS >gi|333758476|gb|AFIH01000001.1| GENE 1371 1352866 - 1354092 344 408 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 [Flavobacteriales bacterium ALC-1] # 4 408 7 413 413 137 28 3e-30 MFLENVKMALGSLRANKLRSFLTMLGIIIGIGSVISIVSIGDSIRKMFSDLYKNYGVTQA SIMISPYMDWNDLRDSDEFTMDDFNSFKRIFGSRLDYADNSPYESIDVKVGRNRLKVGLS GVEYNFIDFQPLKILNGRTFSEKDVSERKPVVMISENTALKLFGTENATGKHFRADFHGE VQDFSVIAVYRRDLSPIEKLLMGSQDKNGEAFVPWTILTGPADSFSTIRYYGKKNFTVEE MNSLNTDIKNYFSRVKNRKPEDWYISSVQDEMKQVDGVMGGLSAAIGGIAAISLLVGGIG IMNIMLVTVTERTREIGIRKALGASREDILVQFLTESALLSALGGLIGVILASALVHLGA MAFNLTVVVKPGIVIIAVVFSAIVGVFFGIYPANKAAKEDPIVALRYE >gi|333758476|gb|AFIH01000001.1| GENE 1372 1354285 - 1354944 871 219 aa, chain + ## HITS:1 COG:CAC0748 KEGG:ns NR:ns ## COG: CAC0748 COG0778 # Protein_GI_number: 15894035 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Clostridium acetobutylicum # 1 219 1 232 241 107 32.0 2e-23 MTIREAMEKRHMVRKYKDTVLPEEIVKKLNERIEALNKEHHLNLVLRTEDGTAFAELIDK LITKNAKNFIILAADPAEGVEEKIGYASADIMLYAQELGLNTWWVGASFNKDAVKKECPD HTVYGVISIGYGEEQGSVHHSKDDFEVCSYEGEAPQWFKDGVEYALMAPTAFNRQSFYIK GKGNTVHFEYKAGEFQGIDTGLVKYHFEAAAGKENFEWA >gi|333758476|gb|AFIH01000001.1| GENE 1373 1355215 - 1355820 589 201 aa, chain + ## HITS:1 COG:PA0966 KEGG:ns NR:ns ## COG: PA0966 COG0632 # Protein_GI_number: 15596163 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, DNA-binding subunit # Organism: Pseudomonas aeruginosa # 1 199 1 200 201 136 38.0 3e-32 MIRFVHGILREKKEDSLIIEAGGLGYGVRVPISVLSEAPPIGEELLLHTYFSVREDGQDL FGFFTEKDRDFFMQLISVSGIGAKTALGILSCFRREELIALILSADSKRIQKAPGLGKKS AERLILELKDKLQVEDALPGAVEPEEPLSGGFSEAMQEAMEALLSLGYKQGEARIAIVKT PNVEEMNAEEILRSALRKLAF >gi|333758476|gb|AFIH01000001.1| GENE 1374 1355824 - 1356822 1025 332 aa, chain + ## HITS:1 COG:CAC2284 KEGG:ns NR:ns ## COG: CAC2284 COG2255 # Protein_GI_number: 15895552 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, helicase subunit # Organism: Clostridium acetobutylicum # 3 328 1 325 349 389 58.0 1e-108 MGMERRLIQTEESREDLVYEPKIRPKMLSDYIGQEKLKEMLSIYIEAAKKRKQSLDHCLF YGPPGLGKTTISNIIANELGVNCKITSGPAIEKPGEMAAILNSLSEGDVLFVDEIHRLNR QVEEVLYPAMEDFAIDVLLGKESSTRSLRLELPHFTLIGATTRAGLLSAPLRDRFGIISK LEFYKKEELTKIVLRSAKVLSVPIEEDGAKSIAMRSRGTPRLANRLLRRIRDFADVKYDG VITKEVAEESLDLLNVDKLGLDQNDRAYLTAIVDKYSGGPVGLETLAVSLGEDSGTVEDM IEPYLLLQGLIDRTKRGRVATESAYRHLGLVQ >gi|333758476|gb|AFIH01000001.1| GENE 1375 1356843 - 1357226 458 127 aa, chain + ## HITS:1 COG:no KEGG:EUBELI_00944 NR:ns ## KEGG: EUBELI_00944 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 1 123 1 122 135 72 37.0 7e-12 MGDKNTVDVIIDGKIVRVSGTESEAYLVSVSNYLNAKITSFKKEFKNYRLLDEDLRSILL QLNICDDLFQEQAKTEKAEQEKEELEKEIYSLKHDLVKSQMKLDGVLQELEKAQKRLFET EGNKGEK >gi|333758476|gb|AFIH01000001.1| GENE 1376 1357226 - 1358548 1062 440 aa, chain + ## HITS:1 COG:CAC2341 KEGG:ns NR:ns ## COG: CAC2341 COG0826 # Protein_GI_number: 15895608 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Clostridium acetobutylicum # 6 302 3 300 787 260 48.0 4e-69 MGEKYRAELLAPAGSLSVCKAAVFAGADAVYMGGQKYSARAFAKSSVSEEDELLLAIEFC HLYGVKLFMTVNTLFKESELENLPEYMDPYVEAGVDAVIVQDLGVAKVLKETYPDLPLHA STQMTANTREAVSLLSSFGMERIVLSRELSLKDISDIYESTGAELEVFVHGAMCYSYSGA CFMSSLLGGRSGNRGRCAGTCRLPYTTAGKKGNFLSMKDMNTLDSLEEILKAGAYSLKIE GRMKSELYTATVVSVYRKYLDLALKGESYTVSDQDRKLLKAVYDRGGETSYLYQHNAKDM IALVDRPFRKEEEELTAFLRKSMEERERKLPLSMELKVESGAVLELSLEQEDIRISVFGE QPVEKAKQRATSKDEMEKQLLKLGNSCFYPKALRITGEEEVFIPLSALNALRREGCERVR EAILAKFRRNPRNREFNGIR >gi|333758476|gb|AFIH01000001.1| GENE 1377 1358496 - 1359326 436 276 aa, chain + ## HITS:1 COG:no KEGG:Closa_2235 NR:ns ## KEGG: Closa_2235 # Name: not_defined # Def: peptidase U32 # Organism: C.saccharolyticum # Pathway: not_defined # 12 276 461 727 727 152 34.0 2e-35 MPNLDEIREIGSLTVSVEREEQLEACLKVKNIQRIYLDEASFSEEEIRRFAKKIKERGIE AALRFRRIERREDPGKSCLSWLTENDETSLFSAFLFRSLDQVSVLQRVERKNFHSVFDYT LYSYNASALEVWKDFSAETVTFPIELNFREDKDFSSWANKAGLSTELLFYGHLPMMVSAN CVEKTRNGCTKKNHILGLKDRQNKELSVRLYCKFCYNQIFNADVFSLFGLEKEVAALKPD SLRLEFTVESKNEVEEVLQGKMNKSFTRGHFHKGIE >gi|333758476|gb|AFIH01000001.1| GENE 1378 1359418 - 1360791 1353 457 aa, chain + ## HITS:1 COG:CAC0505 KEGG:ns NR:ns ## COG: CAC0505 COG0772 # Protein_GI_number: 15893796 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Clostridium acetobutylicum # 83 426 52 395 400 166 33.0 7e-41 MGNLFSSFAKIVSILLMLLYSYGLFRNLSIDYREGKKKLSGLLYKILLLLHFISYAVLYF QTGNLFYIYFYLPQLLYFLLYPLIWKKLYPFYNEVLLNNQCLFLALGWILLARLQEAKAI KQFAVAMAASLLVLVIPYIVDKVWDFQKFRYIFAGIGILSLLLVLVLGTVNFGAKMSVSL FGFRFQASEFVKLSFVFSIAGILSEEHGREGVIHSACVAAVHGIILVLCKDLGSALLLFI SYVFMLYVARNQLLYLLAGGLVSALAGVLSYGLFSHVRTRVYAFIDPWRDMAGKGYQITQ SLFAIGTGGFLGLGLFQGLPNKIPIVENDFIFSALSEEMGGVVAICLILICLSCFMQMMM MGRDMESSFYKLVALGLSVIYVIQVILTIGGAIKFVPSTGVTLPFMSYGGSSLISSFIVF ALFQSLFIIQGKEDEVEMEEDVESAEQQEMESEEEDA >gi|333758476|gb|AFIH01000001.1| GENE 1379 1360784 - 1362364 1149 526 aa, chain + ## HITS:1 COG:CAC0506 KEGG:ns NR:ns ## COG: CAC0506 COG0768 # Protein_GI_number: 15893797 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Clostridium acetobutylicum # 64 505 11 460 482 250 34.0 6e-66 MRREDSEEKRSRKGKEKNPENVINKQREKQTEGRQQAKRRREEALSETKLAMIRRKQNRE MLGIIYLFALIFFAMIVYFCHFILFQAEDKMASPYNARIDYLAQKTVRGEIQTADGMVIA KTMTKEDGTESREYPGGAAFAHPVGYSVKGKTGIESLGNYYLTNSGINPLQKFMNEIENR KNPGDTLVTSLDADLQKLAYSLLDGRKGSIVCMEPSSGRILAMASAPSFDPNQLQENWDS LISEENTDGNLVNRATQGLYPPGSTFKLLMALEYIREHPTDWQDFSFKCKGEYVDPSNPA NVVHCYNGEVHGTVNLESAIAQSCNSAFAFIGSEIDVNRLQSLAEDFYYNKDLSIGLPSK AGQFSLTADSPTWLKMQSGIGQGETLCSPLQNLCMVSAIANHGTLIYPTILSEVKSKEGT AVHHFPKGEEITLMSSSESDALKQFMRSVVTEGTASALKTKAYQVCGKTGSAQVKEGGKL KTNAWFVGFAPMDDPKLAVSVLVEDGDTGGKTAAPLARELFDLYLK >gi|333758476|gb|AFIH01000001.1| GENE 1380 1362381 - 1364177 220 598 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 269 573 207 502 563 89 25 6e-16 MKRLLSYISELKGKSIIAPLFKCLESLFELFVPMVISYMIDSGIQKGNTVIIWRSLFLLL FLALIGLSCAIVAQYFAAEVAMHVGQSYRNALFHKVLNLSYSNIDEVGSSSLLTRLGPDI FQIESTVNMVLRLFLRSPFIVFGAVIMAFRISPSISLLFILVLVLLSVLIFGIMLITMPL YKKIQVALERITKQVRENILGVRVIRAFYREKKEEEGFQKSNEAYTAMQVKVGKISSLLN PLSMLIIQLGLMGILYFSSRLVNDGRLFQGNVVALTNYMSQILAELLKLANLIILILKGL ASLDRVEEVFAIENEQVEEASSDLSRQYGSMDNAEIESDSKWNTEDNTSKDEEEAIVFQN VSFSYGNNGEYAVSDLNFSIKKGESLGIIGGTGSGKTTLISLLSGFYPCYSGEIRLFGKN QRNYVKEELFGSIALVPQKAVLFSGTVRENLLWREKNAQDKELWEALDMACAKEFIEEKG KGLELPVTEEGKNFSGGQRQRLCIARALVGEAKFLILDDSSSALDFATERKLRHALSAYK RVENKIIISQRVASIRDLDKIIVMDQGKIVGMGKHKALLESSPVYKEICLSQLKKEEL >gi|333758476|gb|AFIH01000001.1| GENE 1381 1364178 - 1364435 251 85 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225389116|ref|ZP_03758840.1| ## NR: gi|225389116|ref|ZP_03758840.1| hypothetical protein CLOSTASPAR_02862 [Clostridium asparagiforme DSM 15981] hypothetical protein CLOSTASPAR_02862 [Clostridium asparagiforme DSM 15981] # 9 79 11 81 499 67 42.0 4e-10 MEEKKYTQGKVFRRILQYAKVYKLWIFLSFFLSFLTVVLSLTLPILMGKGIDNLLSEGKV NFSGLHRILLLMLVILVFTVFSNGA >gi|333758476|gb|AFIH01000001.1| GENE 1382 1364432 - 1365931 211 499 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 260 476 279 502 563 85 27 7e-15 MNQVNTYLSYKLVEDLRRNCIHHMQKLPISYYDREKPGDLLSRLTTDIEQFSQGILMGLN QFLQAVLTVIETAVFLFILEWKIAVILLLITPLSYFIAKFIAKRAYIYFQRQSKERGETS SFTTEVVGNIKLIQAFQKEEDMEKLYREKNEKMSRSSMQANFYSSLVNPLTRFLNALGYA LVAGIGGYLAILGMLSVGSLSSLLAYATQYAKPFNDITSVITELQNSLASASRVFSFLDE KPMDRTKETQELGAEISGKVALSHVDFSYQKGQKLITDFNLEVEPGQTIAIVGPTGCGKT TLINLLMRFYPPNQGEIYLDGFPYEKIKEASLRRAYGMVLQETWLKSDTVFENIRYGKED ASLEEVKEACKRAHCHYFIMQLPKGYDTILAEDGGNLSQGQKQLLCIARVMLMDPTILIL DEATSSIDTRTEQKVQSAFQEMLKGRTAFIVAHRLSTIQNADCILVMKDGNIIEKGSHNA LLQENGFYKELYESQFQAS >gi|333758476|gb|AFIH01000001.1| GENE 1383 1366223 - 1367974 179 583 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 354 568 16 234 245 73 25 4e-11 MTIIKTLSKSVREFKKDSMLSPAFVSAEVVLECMIPFFTARLINQMKVDASLPMILRYGI VLVIMAMLSLVCGIKAGNYASSASTGFARNLRRDMFQKIQGFSFSNIDRFETSSLVTRLT TDVSNVQMAYMMLVRLAFRAPLMMIFAFTAAFLLGGRMAIIFCIMIPFLGASLAILIAKA MPMFDKVFKNYDALNDSIEENVQGMRVVKAFVREEYEKKKFNDRAEKLANEFIRAEKLVS ITNPLMQFCLYIGVIFILSFGSYLVVITQGLSLDVGQLSALLTYSFLILSSLMLVAMVFV MVSISIESTRRIVEVLTEESDLQNPENPVMEVPNGSIDFHHVSFKYSKDAKKNVLSDVEV HIPSGATVGIIGGTGSAKSSLTQLISRLYDATEGEVLVGGVDVRNYDLTVLRDQVAVVLQ KNILFSGTIAENLRWGNKNATQEEIEHACKLAQAAEFIDNMKERYESRVEQGGSNFSGGQ KQRLCIARALLKKPKVLILDDSTSAVDTKTDALIRKGFKEFIPDTTKIIIAQRIASVQDS DLILVMDKGRVIAQGNHEKLMESSKEYRETYESQNRKEEKDGE >gi|333758476|gb|AFIH01000001.1| GENE 1384 1367964 - 1369868 192 634 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 398 620 133 355 398 78 27 1e-12 MENKKKGIDKDFFPTLKRILKTLFSFYPVFLPLTLVLILVNAVVSAIPSLFQQKIISLVE RAYKSGEWKSVSEPIFHQITILAILYGISLLAAFIYNWNLATITQGSLKKYRQKMFDGMQ DLPISFFDRNKTGDIMSHYTNDIDSMRQFISICIPQALSSFITMVTVVFLMLYYSLWLSL LVILGSILMIRVVKDIGGKSGHFFVRQQEELAKSEGFIQEMMNGQKVVKVFNHETEAIAD FDRYNEELFSVSNSANRYSSVIMPILGNIGNILYVLVAILGGILLTYKVPNLSISGLALS ISIVIPFLNMTRQFAGMVGQISSEVNAVVMGIAGAKRVFALMDEMKEEDSGHIRLVSVKD MDGELVETMDRTEMWAWKEVKEDGTVVLKRLLGDVELRDVDFSYDGKRMILKGINVFAHP GEKVAFVGATGAGKTTITNLLNRFYSIQKGEIIYDGFDVYDICLGDLRRSLGIILQDTVL FTGTVMENIRYGKLDASDEECIAAARLAGADDFITRLPNGYDTELSGNGGNLSQGQRQLL SIARAAVADPPVLIMDEATSSIDTRTEAIVQKGMDALMAGRTVFVIAHRLSTVQNSDVIM VLEQGEIIERGSHEKLISEKGKYYQLYTGAFELE >gi|333758476|gb|AFIH01000001.1| GENE 1385 1370048 - 1370272 64 74 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDYFPIPLLFFTFLLLYLLPSLFLYFPGSFYSYFFCTLALAPFTQTSLFNHYFPIIAEKN RKKQGSQASPFPYC >gi|333758476|gb|AFIH01000001.1| GENE 1386 1370271 - 1370690 464 139 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227872449|ref|ZP_03990791.1| ## NR: gi|227872449|ref|ZP_03990791.1| hypothetical protein HMPREF6123_0730 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_0730 [Oribacterium sinus F0268] # 2 139 35 173 175 171 63.0 2e-41 MKNKKELKVIIGIVLIVLFIAGLSYFVPKLLSKPSQKLRVLKNGEILLEHELGKDAKFMI LDQEAKEVPFEESLSSLSDDERNPAMHEVNFIEVKDGKVLCTESNCNNQICVHTPAISAE NADLPIVCLPHGLILQIVS >gi|333758476|gb|AFIH01000001.1| GENE 1387 1370708 - 1371634 722 308 aa, chain + ## HITS:1 COG:CAC2422 KEGG:ns NR:ns ## COG: CAC2422 COG1032 # Protein_GI_number: 15895688 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Clostridium acetobutylicum # 1 278 1 277 290 133 31.0 4e-31 MDYEGRICRSPMEKSSYMLPVTVGCPYNGCHFCNLFRDLHYRELSFSQIEEELQRVQNAG GKPKKIFLGDGCAFGLKTEQLLKILDLIHQYFPECDIINSDATVTSIRIKTNEELRALSE NGYKHLYIGIESGLSDVLSFMHKEHDVAEAEREIARIKNAGMIYDAHIMSGVAGKGRGIE NAEALAAFLNRTKPEFVVNFSMFISSDTPLYQDIVKGCFHPATELENLKEDRRLVELLAT DGTELFYDSFHDCIRKRVWGTLAKDREKMLKQLDKWIEEFKQKESIYATDFPYKDCPAQT MFDLENIL >gi|333758476|gb|AFIH01000001.1| GENE 1388 1371644 - 1372918 842 424 aa, chain + ## HITS:1 COG:CAC2354 KEGG:ns NR:ns ## COG: CAC2354 COG0520 # Protein_GI_number: 15895621 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine lyase # Organism: Clostridium acetobutylicum # 6 419 2 374 379 299 40.0 7e-81 MEKKKIYLDNAATSFPKPEEVPRAVYDYMTKLGTNVNRGGYATAYDTETVVFECRELIGA LFHAPDYKNVVFTRNITESLNVVLKGLLRSGDHVIVSSMEHNAVMRPIRQLEKKGINFTR VQCESDGSLKPEKLLSCLRPDTKAVVMTHASNVFGTMLPIQEVGNFCKENGLIFILDSAQ TAGVFPIDMEKMHIDILCFTGHKGLLGPQGIGGFILRDELVLKIEPLISGGTGSLSNVET VPEFMPDRFEAGTPNLPGIFGLHAALNWLRKLGEADLLKGESLKENSAVQEVFGKTPFSV EQCFSAALEKIRKHELHLTAEFLKMLGPLEKEGKLKIIGKKDMEKRTGVVSIQTLTRELS DTAFQLDTRYGIMTRVGLHCAPSAHKTMGTYPTGTIRFSFGFANTDQEVKIAADALRELL EEEK >gi|333758476|gb|AFIH01000001.1| GENE 1389 1372942 - 1373637 724 231 aa, chain + ## HITS:1 COG:SPy1551 KEGG:ns NR:ns ## COG: SPy1551 COG3382 # Protein_GI_number: 15675447 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pyogenes M1 GAS # 27 204 15 208 238 60 29.0 3e-09 MKIIVDKSIADLGKKSIVIAIAKNVNPAAKLSDAFLEKQKKMEEWALNCDAEEAAKHPVN QGYIDSISAVGRSTKKNPPTAVALIQNIKRRGSIPNINSIVDIYNVESLHSFLAIGGHDF DKIEEEICFTVSKKEDIFYPILAPEKNVAETDYVYKDKKGIMAWIDVRDGENYKFDENTK NAIFIIQGNANTSVEMRLEALERIRKDMAECMPDMEFTTHVITYGDENTEI >gi|333758476|gb|AFIH01000001.1| GENE 1390 1373912 - 1375201 1197 429 aa, chain + ## HITS:1 COG:MK0258 KEGG:ns NR:ns ## COG: MK0258 COG1775 # Protein_GI_number: 20093698 # Func_class: E Amino acid transport and metabolism # Function: Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB # Organism: Methanopyrus kandleri AV19 # 6 423 5 420 421 399 48.0 1e-111 MDKNHQMWSDLGMDLDKHDLLCAALPGAFGDVFLTQENRPKGMDYFNMVTADIHGIRPAE LIQAQKEGRKVIGTFCVFVPDEVIIAANGIVTGLCGGSQFWVPEGEKVLPANTCPLIKAS VGARLGKTCPYFRIADMFVGETTCDGKKKAYEILSEDVKMHIMHLPHGKRPQDAAAWDRE ILDFVKVMEDFTGNKVDIDKLNQAIHIVNEKRKALQRLYNCRKNTCVPISGRDVLLIMQI AFFDDPERLTAQVNTLCDELEKRIEEGISVSPKNAPRILLTGTPMAIPNWKMHNIVETSG GIVVCEENCTGTRYFTHTVKENNKTMEEAASALTERYFNNIHCACFTPNPERIDDILRLA KEYQVDGILNVNLKFCNLYATENYFVERRLKEEGYKVLSLETDYEDSDAEQLRTRVSAFL EMIEANKTN >gi|333758476|gb|AFIH01000001.1| GENE 1391 1375255 - 1375509 172 84 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225570920|ref|ZP_03779943.1| ## NR: gi|225570920|ref|ZP_03779943.1| hypothetical protein CLOHYLEM_07024 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07024 [Clostridium hylemonae DSM 15053] # 2 83 4 85 86 79 41.0 7e-14 MLNYYILFDNHEQAIKMHRDLQNAGIDSVIAPTPRSASLCCGVCLRIMKEDFQNLEHYLQ ENKAVYREIKEIQENLNPKRDAYL >gi|333758476|gb|AFIH01000001.1| GENE 1392 1375658 - 1376593 735 311 aa, chain + ## HITS:1 COG:NMA0440 KEGG:ns NR:ns ## COG: NMA0440 COG0791 # Protein_GI_number: 15793445 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell wall-associated hydrolases (invasion-associated proteins) # Organism: Neisseria meningitidis Z2491 # 192 311 148 271 280 87 37.0 4e-17 MRNKKFLALCSIAALSVFLAVPAYAGQWQKGSGKNKNKWWYNHLDGTYPKSAWAWIDSSG DGFAECYYFDSQGWLQTNKTIDGYTVDSTGAWIENGVVKLKSVSETGVFTNGKNEYSTGT VEMEGDLNLGTEVKEIKENSISAGKNVLNGKSNQPDKKLQDKKDGSDILDLSDSFGDPDL DTINAALNANKDMSDLITYARSFIGVLPYKTAGSSLINGTDCSGFTQQVFKKFGISIPRD SRSQYAESIKISEAELQPGDLIFYGSSPSTIYHVGIYSGNGTIIHNTRTGDFVREHDYHY AKAYGFGRYLR >gi|333758476|gb|AFIH01000001.1| GENE 1393 1376882 - 1377637 416 251 aa, chain + ## HITS:1 COG:CC3744 KEGG:ns NR:ns ## COG: CC3744 COG3786 # Protein_GI_number: 16127974 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Caulobacter vibrioides # 104 244 23 169 169 71 26.0 1e-12 MLLCFSVGFSVFAGPGDEYRRKLEEKKIAEEDNKKPSYEAIEFDDKLPESQSDEKEERIG KALFASKVGQRESQVILVLDHQLSLWNKGEDRYFKLKEWKNGYGRKGMKKAEERKEGDET SPIGAFPISFAFGFKEKENTLLPYRQIKKNSVWSGEKSTYNQWVEKEVPVAGEQLWNYKI CYEKALAIGFNQDPVVYGRGSAIFLHIKSPGTWESAGCITIEKSSMEELLPLLKEKLSIL ILQNEEEIKNY >gi|333758476|gb|AFIH01000001.1| GENE 1394 1377646 - 1378503 581 285 aa, chain + ## HITS:1 COG:CAC0431 KEGG:ns NR:ns ## COG: CAC0431 COG1284 # Protein_GI_number: 15893722 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 5 278 11 285 291 149 34.0 6e-36 MDKKKRIIRDYIFIVAGSFLISVASLSIYDRAELVIGGVTGVSIIIRHLFSVPLWLSYTL INVPLFVIGFFTKGGKFLFRTIVSTLLCSFFLFILPAWEILPKDDFFLASVVGGIFMGLG CGMVFISNCTTGGTDLLAAILQTKFKHISMAKLVQCVDSMVILWGLQIFGVRKALYALVS IYVFTKVCEAIMEGMHFAKAVTIISHKGDEIANYIITTMHRGVTGLDAKGMYTKKGITML YCVLSNREVSNLKDVVNDMDEKAFFIISDVREVHGEGFIRRDELV >gi|333758476|gb|AFIH01000001.1| GENE 1395 1378698 - 1379684 456 328 aa, chain + ## HITS:1 COG:no KEGG:EUBREC_3385 NR:ns ## KEGG: EUBREC_3385 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 9 321 66 381 382 74 23.0 6e-12 METRILFYLSYPLLRLCKSKRGLHACLVLISFFVSLFFGTGISLYYTLPLCNATLGREED SPFLFIHCFCLQILAAELGSILLPYTALSDFYLFLHFNYSLLEYFRISFLFFLFSILFLL PYVFCFKKEKNQVLSSGTLERLQNAYFTLKKEKILGKGNCFYPFCFFGILFFLSCIKWIP IPFCFALTLIYTIFFRRRVIVRLDYDLLSLIILVFLIRGNLLHLRAFSEFLLPFIQGREA SRALILSEIFTRLPVSVFLADLSTKGRQLIIASILSAIHPLALNYSGIITHSMLKNKEHT KVFVLHYIFLHLQMLLLFVFLAFFTGNL >gi|333758476|gb|AFIH01000001.1| GENE 1396 1379699 - 1380667 834 322 aa, chain + ## HITS:1 COG:CAC3454 KEGG:ns NR:ns ## COG: CAC3454 COG0042 # Protein_GI_number: 15896694 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-dihydrouridine synthase # Organism: Clostridium acetobutylicum # 1 309 1 307 311 234 38.0 2e-61 MNCYFAPLESITSYPLRNTHAHFFPETDKYFSPFVSANEEGSYSGRIARDLSPTNNENLY LVPQLMGKNHKHMLEVFKYLQNLGYQEVNLNLGCPSGTVVAKGKGAGMLRNLTLLEEFFN DIFSALPSGLSVSVKTRIGISDSSETEDIFLLFNAFPFSEMIVHPRLQKQFYKGNVDLDA FRKICGISKHKLIYNGDIENIATAIKIREEFPEICGIMLGRGLLSNPALVREIKGGKALQ EEEFKDYISAVEDAFSKEIAEDRNLLAKLKECWTYFSRNYPNSVRGIKELRKAKNMAEYR SAKYRIYSESSFYAYRGEKEWI >gi|333758476|gb|AFIH01000001.1| GENE 1397 1380658 - 1381251 199 197 aa, chain + ## HITS:1 COG:no KEGG:Fisuc_0574 NR:ns ## KEGG: Fisuc_0574 # Name: not_defined # Def: hypothetical protein # Organism: F.succinogenes # Pathway: not_defined # 1 129 1 125 327 122 41.0 1e-26 MDIEYPSYYEEFRCIAGKCKDSCCRGWCIDVDRESKKRLDRIKGPLGEKIKEKLKEGEGN YYFPLEENGDCPFLLKSGLCEMILSEGEDALCNVCASYPRVKQIYGNYAQYDLNASCEEA FRFILKWDGRIVRAVEEGMGEKLSREQERELIHVLAFRTALWEELSYLPTDFNTFFLHLF PFFWREKVKYFLKVSIR >gi|333758476|gb|AFIH01000001.1| GENE 1398 1381416 - 1381760 222 114 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227872441|ref|ZP_03990783.1| ## NR: gi|227872441|ref|ZP_03990783.1| FliB family protein [Oribacterium sinus F0268] FliB family protein [Oribacterium sinus F0268] # 25 103 280 357 362 70 47.0 5e-11 MNPEMQFNSLSKEKRLEWEKQIVALCRYYLFRYTLLSIKEASLLPVFSLLYQSIEWIYTA FVFINTVSDEEKKQFSCFFGEEPSVLRIAVFFSKELEHDEGNIRNLLYFLPLFN >gi|333758476|gb|AFIH01000001.1| GENE 1399 1381895 - 1383379 1356 494 aa, chain + ## HITS:1 COG:Cgl2942 KEGG:ns NR:ns ## COG: Cgl2942 COG4868 # Protein_GI_number: 19554192 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 4 492 3 492 495 597 58.0 1e-170 MDKIGFDNEQYLKTQSKHIKERIAKFGGKLYLEFGGKLFDDHHASRVLPGFQPDSKIRML GELKDDAEIVIAIHAGDIEKNKVRGDLGITYDMDVLRLIDAFRGYGLYVGSVVLTRFSGQ EGAIAYQKKLEALGIKVYRHYSIPSYPSNVPLIISEDGFGKNEYIETSRSLIVVTAPGPG SGKMAVCLSQLYQEHRHGINAGYAKFETFPIWNIPLQHPVNLAYEAATADLNDVNMIDPY HLEAYGVSTVNYNRDVEVFPVLKAMFNTIYGSSPYESPTDMGVNMAGNCIIDDEAVRKAS QQEIIRRYYHALVEKRKGSGSDSIVEKEQLLMEKANVSGKDRPVISAALQKAELTGAPAA AISLPNGSIVTGKTSSLLGACSAMLLNALKVLAGLPDDLKVISPEIIEPIQHLKVEHLGN HNPRLHTDEILIALTISANTDPNAEKCMEQLVNLNQCEMHSTVILSQVDEKTLGKLGIRI TSEPQYQNKKLFHS >gi|333758476|gb|AFIH01000001.1| GENE 1400 1383920 - 1385551 1484 543 aa, chain + ## HITS:1 COG:MA3787 KEGG:ns NR:ns ## COG: MA3787 COG0493 # Protein_GI_number: 20092583 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Methanosarcina acetivorans str.C2A # 59 465 49 466 469 263 40.0 5e-70 MESVLNGSADMDTLKTIEKTAEAIYHSADCAIGFEAAKMVLRGIRGFYDDYAEHVKHGRC FAKQSQPVPCVALCPAHVDVPGYISLIHEGRYAEAVQLIRKDNPFPAACGLICEHPCELR CRRTMVDKAINIRGLKRYAVEHEGEIKVPQIMDKTGKKVAIVGGGPSGLSAAYYLSIMGH DVTVYEQRKKLGGMLRYGIPAYRLPREILDHEIEGLMKTGFQVKTDVSIGKDLSLAQLKK DFDAVYVSIGAHTDKKLGIPGEDAEGVISAVEMLRNIGDDRYPDFSGLDVVVVGGGNVAM DVARSAVRLGAKTVKVAYRRRRVDMTALPEEVEGAIADGCDIVELHSPVRIEKDEKGHCK GIVLKPQIIGGVRYGRPSPKDSQAPEVLVNADLVLVAIGQGIDFRKFEEYQGITIESGRI NALDTSALKNAEGIFAGGDCVTGPATVIRAIAAGKTAAANIDEYLGFFHEIESDIVLPPV RFDDNAPTGRVNMKERPANERVCDFKLMEYGMTDEEACQESGRCLHCDHFGYGIFKGGRE SKW >gi|333758476|gb|AFIH01000001.1| GENE 1401 1385580 - 1387280 1127 566 aa, chain + ## HITS:1 COG:TM0201_2 KEGG:ns NR:ns ## COG: TM0201_2 COG4624 # Protein_GI_number: 15642974 # Func_class: R General function prediction only # Function: Iron only hydrogenase large subunit, C-terminal domain # Organism: Thermotoga maritima # 201 554 5 358 372 340 50.0 5e-93 MPEHTTILDAAKEVGITIPTLCYFKNLNEIGACRVCVVEVEGDARLHAACNSPVLEGMVI RTNSKKAREARKYNVELILSQHNVTCTTCVRSGNCSLQSVANDLNIVGKDYFPKDLPKQK GSKAFPLIREYDKCIKCMRCIQVCDKIQATHVWDVINSGGKSTVDVRDFYRLEDSSCALC GQCITHCPVGALRERDDTDKILDALDDPETIVLAQIAPSIRTAWGEEFGLSPEEATVERL SACLKEMGFDYVFDTDFSADLTIMEEASEFLHKLTHNEGQFPMFTSCCPGWVRFIKSHYP EFIPQVSTSKSPQQMFGAIAKSYYADILKVDPKKIFSVSIMPCLAKKAECAYPNMVDKDG NFDVDVALTTREVNRLIRALHISPAKLSDRALDMPLGIGSGAGNIFGATGGVMEAALRTA YYLATGENPDPDAFQEVRGMEGWKESSFTIAGNKLKIAVVHGLANADRLLNALKNGQVHY DFVEVMACPGGCVGGGGQPIHDQVEMAALRAPVLYKQDREGSIRFSHENPSIKSVYKDYL GEPLSEIAEELLHTDQKGWLMPQEIK >gi|333758476|gb|AFIH01000001.1| GENE 1402 1387664 - 1388581 999 305 aa, chain + ## HITS:1 COG:CAC3644 KEGG:ns NR:ns ## COG: CAC3644 COG0601 # Protein_GI_number: 15896877 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Clostridium acetobutylicum # 1 305 1 305 306 295 49.0 6e-80 MPKYILKRAIMSLITAFLVATMTFFVMNMVPGGPFLAEKAVTPQAQAAMEAKYGLDKPLI KQYTTYMTGLLHGDFGLSIKKRGRTVAQIIAVKFPVSARIGGMALVLAVLTGVPLGAVAA FNRGKFLDNLIIVLSTAGIAIPSFLSSTLLVYVFTTKLHLLPSLGLKDARSYVMPVIALA LYPSFYMARLMRSSMLDVMGQDYMRTARAKGVTTFKSIFKHALRNAILPVITYLGPLLAS LMTGSFIVEKIFNIPGLGSEFVSCITSRDYPMIMGTTIFLAVFVIVMNLFVDIAYAFVDP RIKLK >gi|333758476|gb|AFIH01000001.1| GENE 1403 1388599 - 1389651 844 350 aa, chain + ## HITS:1 COG:BS_oppC KEGG:ns NR:ns ## COG: BS_oppC COG1173 # Protein_GI_number: 16078210 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Bacillus subtilis # 18 349 9 305 305 229 38.0 5e-60 MEEIKKNPLSMQVSMEDFMPASGEDKESLVVMRESVGFWKDGIRRFRKNKIAMSAFFLVL LIMIFCFIVPAFYPYKYEQQMKGSERLAPMQYSKVEQAEMAKGEKIFPHLLGTDQNGRDY MIRVLVGGRVSMTVGLVASVLILMIGSVFGAIAGYFGGIIDMVMMRIVDIIYTVPDVLII ILLAQTLKFPLEKLSMLPAFTWMQKLGSNMISMFIVFALLYWVGMARIVRSQIMILKQSE YVTAARALGAGPGRIIFKHLIVNCIGTLIVTTTLQIPSSIFTESFLSFLGLGVQAPMPSL GSLASAALNGFQTYPEKLFAPAFLIFIIILSFNLLGDGLRDAFDPKLKQQ >gi|333758476|gb|AFIH01000001.1| GENE 1404 1389665 - 1390675 618 336 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 16 324 28 329 329 242 41 4e-62 MAEEFLVNIQEERLSFFTPAGEVKALNNVSIQMKEGEVLGIVGESGSGKSVTAYSIMGLT AQNGKIVGGTVDFNGHAIQNMTEKELRKIRGNEVSIIFQDPMTSLNPVWTIGNQIAEAVS LHTDKKGKAARDRAKELLELVGINEPEKRLKQYPHELSGGMRQRVMIAIALACEPKLLIA DEPTTALDVTIQAQILELMQELKKKLGMGIIMITHDLGVVASMCDYIAVMYAGEIVEYGT TDDIFYNPKHEYTKGLLRSIPKFHEKDYSRLVPIDGQPVDLLNPPKGCGFAPRCASCMKI CLEVKPEKNYYGGVHYARCLLQQKEDFIRNTGKGEV >gi|333758476|gb|AFIH01000001.1| GENE 1405 1390675 - 1391655 692 326 aa, chain + ## HITS:1 COG:CAC3641 KEGG:ns NR:ns ## COG: CAC3641 COG4608 # Protein_GI_number: 15896874 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, ATPase component # Organism: Clostridium acetobutylicum # 5 320 7 323 326 423 66.0 1e-118 MADHLLELSHLKQYFPVAGSKKVVKAVDDVSFYINKGETLGLVGESGCGKTTTGRSILRL HEPTEGKIVYDGEVIFDSEKGIKKNMLPYRRKMQMVFQDPYASLDPRMTVEDIVGEAIDI HKLCKNKKERREKILSLLSTVGLNSEHANRYPHEFSGGQRQRIGIARALAVNPEFIVCDE PVSALDVSIQAQVVNMFEDLQEKFGLTYLFIAHDLSIVNHISSRIGVMYLGHLVELADSD QITFHSMHPYTKSLISAVPIADPKVARASHRIILSGDVPSPLNPPSGCPFRTRCPYADEQ CASETPKFKEEQAGHFVACHHLDKLN >gi|333758476|gb|AFIH01000001.1| GENE 1406 1391701 - 1393374 1747 557 aa, chain + ## HITS:1 COG:CAC3634 KEGG:ns NR:ns ## COG: CAC3634 COG4166 # Protein_GI_number: 15896868 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Clostridium acetobutylicum # 50 550 41 543 550 311 34.0 2e-84 MKKTKLISAMLLAAVLLSACGGSKTVDGTKSGSDAASEQTAEKTSAGGSIDVQIGSSPET MDPALNSAADAANMILHAFTGLLTVDKNQNIVGGLAEKWETSGDGLTWTFHLRPDLKWSD GSDLTAEDFVYSWKRLADPSLAAPYGYDLLNMIEGYDKAAKGDLDALAVSAPDSSTFVVK LSSPCTYFDKIASFISTSPVQKVTVEENGDEWSTKPETYITSGPYKMTEYVDGDHITFEK NDYYYDAANITFDKIVFHLISDDNAAYTAYNQGELLLAKAIPSEEIPNLAGKEDFHVDPM MGTYYVSFNTQKAPFDNPKVREALSLAIDRNYVANTIMQGTYSPAVNFVGPGISDAAKDS QFAEVTKEKYGDFFNNDDYDANFAKAKELLAEAGYPDGQGFPQFSYLTNDTGYHKAVAEY LQDVWKKLGLNMTIDIQEWKTVTANRRNGNFDVARNGWVMDYDDPSNIINLFETGNGNND GKYSNPEFDKLVEEARSTADVEKHYDYLHQAEQVILKDYGMAPIAYYSEFYLKSPKLQNV WYSPTGYYYFMYGTLAE >gi|333758476|gb|AFIH01000001.1| GENE 1407 1393491 - 1394195 735 234 aa, chain + ## HITS:1 COG:CAC1789 KEGG:ns NR:ns ## COG: CAC1789 COG0528 # Protein_GI_number: 15895065 # Func_class: F Nucleotide transport and metabolism # Function: Uridylate kinase # Organism: Clostridium acetobutylicum # 1 232 4 235 236 211 46.0 1e-54 MEKRRVMLKLSGEALAGEKHFGFSDDVIFRVADQVKRAVDRGIEVAIVIGGGNFWRGRQS EQVDRYKADQVGILATLMNCIYVSEIFRISGMKTRIMSSFSISDMSEVFSKDEANKALQN GEVVFCACGTGHPYFSTDTGVVLRALELTCKEILLAKAIDGVYDKDPKKFPDAKKYDTLS IEEVVEKRLQVIDLSASILCLENSLPMSVFSLEEEDGIFKALLGEHKGTRVTAD >gi|333758476|gb|AFIH01000001.1| GENE 1408 1394284 - 1394838 775 184 aa, chain + ## HITS:1 COG:SPy0463 KEGG:ns NR:ns ## COG: SPy0463 COG0233 # Protein_GI_number: 15674582 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome recycling factor # Organism: Streptococcus pyogenes M1 GAS # 10 184 11 185 185 181 61.0 6e-46 MDDQFTIYIEKMHKTHDNLMSELATIRAGRANPHVLDRITVDYYGTQTPIQQVGNISVPE ARIIQIQPWDKSVMKEIEKAINMSDLGINPTNDGQVIRLVFPELTEERRKELTKDVKKKG EAAKVAIRNIRRDAMDLAKKLEKNAEITEDDLARQTKDIQELTDHMIEKIDQSVEAKNKE LLTV >gi|333758476|gb|AFIH01000001.1| GENE 1409 1394835 - 1395560 680 241 aa, chain + ## HITS:1 COG:SMc02097 KEGG:ns NR:ns ## COG: SMc02097 COG0020 # Protein_GI_number: 15965252 # Func_class: I Lipid transport and metabolism # Function: Undecaprenyl pyrophosphate synthase # Organism: Sinorhizobium meliloti # 4 238 5 237 247 237 49.0 1e-62 MMENTERFPKHIAIILDGNGRWAASRGLPRALGHKKGCETLEQIVEDCARLGVSYLTVYG FSTENWKRSEEEVGALMQLFRFYMKKLISVANANNVKAKMIGERSRFSGDIQEGIRALEE STKDNTGMEFIFAVNYGGRDEIIRAMHRFSEEYRGENLKDALANLTEEQLASYLDTKDIP DPDLVIRTSGEFRTSNFLLWQSAYSEYYITDVLWPDFNKEELLKAIESYGKRERRFGGRK K >gi|333758476|gb|AFIH01000001.1| GENE 1410 1395575 - 1396465 781 296 aa, chain + ## HITS:1 COG:ECs0177 KEGG:ns NR:ns ## COG: ECs0177 COG0575 # Protein_GI_number: 15829431 # Func_class: I Lipid transport and metabolism # Function: CDP-diglyceride synthetase # Organism: Escherichia coli O157:H7 # 121 295 67 244 249 117 40.0 4e-26 MEKHNETEEIKNREGSVKTAPKGQNEKKLSSFFVRLASGIVLLLLLFIILPDGGNLLLFF NFILSIFACYELLHCFSFHKEKMSILPYLFISLHYLALYYGKHFEMVLMLVYFILLCVDY VLFYPEKTIREICLYFLILPYAGIMFSYLYQTRGVMHGKILVWLIFLSSWAADTCAYAVG ILFGKHKMTPVLSPKKTWEGAIGGVLGSFLLTYLYGLYNNQVYDGFFHSPLKLAISVAFA SLFSIVGDLTASGIKRDFGIKDYSNLIPGHGGILDRFDSALFTAPIIYFALVLFVK >gi|333758476|gb|AFIH01000001.1| GENE 1411 1396501 - 1397745 922 414 aa, chain + ## HITS:1 COG:alr4351 KEGG:ns NR:ns ## COG: alr4351 COG0743 # Protein_GI_number: 17231843 # Func_class: I Lipid transport and metabolism # Function: 1-deoxy-D-xylulose 5-phosphate reductoisomerase # Organism: Nostoc sp. PCC 7120 # 2 405 4 382 399 318 41.0 1e-86 MNIVILGSTGSIGTQTLELLKDHTEYKVLALSAGENISLLEEQAREWKPKYLCVFHEDKA KLLKERFQSSYNRDDTLHSESAENSIPYEKKEIEKDSYSPVIYSGMEGLIRLSALEEADM IVISVVGMVGIQPTISAIQAGKKIALANKETLVCAGHLINDLLKESKAELFPIDSEHSAI WQCLRGEKAEEVEKLILTASGGPFFGLTKEEMRGKKKEDALKHPNWSMGRKITIDSATMV NKALEVLEAHILFHIPIEKIQVVIQRESIIHSAVQFRDGAIKAELGVPTMRVPIAYAVFE EEREDFKGEKLDFTKVMSLHFYPPSYTDFPALALGRSAGLKGGSMTTVFNAANEEAVSLF LQDKIAFLSIPALIEKAMQLHEKDWKAYPSVDEILSIERWARNCVEENANQVEV >gi|333758476|gb|AFIH01000001.1| GENE 1412 1397912 - 1399015 781 367 aa, chain + ## HITS:1 COG:FN1322 KEGG:ns NR:ns ## COG: FN1322 COG0750 # Protein_GI_number: 19704657 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted membrane-associated Zn-dependent proteases 1 # Organism: Fusobacterium nucleatum # 1 358 23 338 339 159 34.0 1e-38 MAAKFFKVGVLEFSIGMGPRILSGVFRNTRYSLKLLPLGGSCAMLGEDAAGSGDFSTAKG EEEEDVLDFDGVVFSKEDLEKYSFEKKPAWQRFIICFGGVWHNFLLAFLFAIILTVNIGT EFPIIGASTVKTPAMESGLQDGDRIVAIAFADGSKRSLATLQELSIFLELHQEDFKKGEI KVTVLREGKKESFSFSPYRDPETGRYRLGVQLKNGRAKANNLFQVFEYSYYEFRFNARIV FDSLAMILRGKVSRQDVMGPVGTVAVIGGAVQQSSSGGLRLTILVLMNLSLMLSVNLGIM NLLPIPALDGGRLLFILLEMLLRKRLNPKWEERINTVGMAILLLLMVAIVFNDVFNLFTG VYSKLLN >gi|333758476|gb|AFIH01000001.1| GENE 1413 1399149 - 1400240 1104 363 aa, chain + ## HITS:1 COG:CAC1797 KEGG:ns NR:ns ## COG: CAC1797 COG0821 # Protein_GI_number: 15895073 # Func_class: I Lipid transport and metabolism # Function: Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis # Organism: Clostridium acetobutylicum # 2 360 1 347 349 370 54.0 1e-102 MIKRTETRVIELGKKEKGLYPSLPLKIGGGNPVVLQSMCNTKTEDIEGSLSQIRALKIAG ADLVRLTVPTKEAAIAFGKIREESPLPMVADIHFDYRLAILAMENGADKIRINPGNIGSS DKVKAVVDCAKERNIPIRIGVNSGSLEKDILEKYNGRVTAEGLAESALKNVELVENMGYH NLVLSIKSSDVLMAYHAHKIVAEKCELPLHIGITEAGTVWSGNIKSAMGLALILNEGIGD TVRVSLSADPVEEIRSGQLILETLGLRKKAVSVVSCPTCGRTDIDLISLAKEVEKIAFSY PDKSLKIAVMGCVVNGPGEAREADLGIAGGKGVGMLFKKGEIIRKVKEEDLLSALREEIE KYS >gi|333758476|gb|AFIH01000001.1| GENE 1414 1400237 - 1404733 3779 1498 aa, chain + ## HITS:1 COG:CAC3442 KEGG:ns NR:ns ## COG: CAC3442 COG2176 # Protein_GI_number: 15896683 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit (gram-positive type) # Organism: Clostridium acetobutylicum # 214 1498 183 1450 1452 1190 49.0 0 MKNFFQVFQELKGNKDLETLFMTTEVSRITLSRDRTKMKIYLHSDHLLKKNELHAMEELI QKQVFSGKKIQIEIHESFHLSSQYNAKILFERYEDSLLDELKEKNIVLHQMFTKGKLEWE DESTLALLIPEIALFQKEEEECIRVIEKIMHERCGIILHFSISYSPELNKAEEKEFEEDE RREHREEKEKFESIEAKMQGKNSDKHSNDSSEAGSNTAVNKEKPEKNLGKTKEEGKEESK GEDSSFKRNFGSRGPFKRSDKEEVYYGRDFQDEIVPISSVGEFSGTVALQGIILHVDERP TRKSGMVIFTFSFTDDTDSIASKIFVEEENLDDARAFLQVGKTIAVKGNIEYDQYDKELE LSRVFGIKKSDFVRAKRVDNAKEKRVELHLHTKMSDMDGVSDIEEYINRALEFGMPALAI TDHGVAQSFPDAMAHLKKLGKEDELQIIYGMEGYLVNDLDTVIKNLSEDLPLSCSTVVFD LETTGFDPKKNHIIEIGAVKLEDGKIVDRMDLFVNPRVPIPYRITQLTSIDDSMVMDADG IEVVLPKFLEFVGDSILVAHNAEFDYNFVENKAKALGIPFKRPVLDTVALSRLLLPKLHR FKLDTVAKELKIELLHHHRAVDDAEATARIYLKELEMLEKRGVQSLGQIDSLDMDTVGKV RKLPSYHIILLAKNDLGRINLYRLISESHLKYFAKHPRIPKSLLKKYREGLIIGSACSNG ELFQALIRGMDDQQLLTIASFYDYLEVQPLGNNRYMLSSDKYSAETEEDLIQYNKKIISL GEQLGKPVCATSDAHYTDKEEDIFRKIILATKGMTEEEGDTFLYFRSTEEMLSEFSYLDE NTKKKVVIDNPLNILKQCERIKPVRPDKCPPVIPNSDETLREICYETAHKIYGPKLPEIV ANRLEKELNSIISNGYSVMYIIAQKLVDQSNADGYLVGSRGSVGSSFAATMSRITEVNPL PPHYICPKCYYTDFDSEEVKSYSGMAGYDMPSKKCPHCGAELDRLGFDIPFETFLGFDGD KEPDIDLNFSGEYQAKAHAYTGTIFGEENTFKAGTIGTLAEKTAYGMIKNYYEERGEQKR NAEIDRLVQGLTGIRRTTGQHPGGIVVLPHGEDINTFTPVQHPANDVESPIITTHFDYHK IDHNLLKLDILGHDDPTMIRKLQDLTGLDPVKDIPLDSKEVMSLFQSTEILGIKPEDIHG VKLGCLGIPEFGTGFAMQMVVDTKPQYLSDLIRISGLSHGTDVYLNNAQDLILNGITTLR DAICCRDDIMVYLMHMGLDPSESFTIMEATRKHKPLKEEWCQDMRDHGVPEWYIDACKKI KYMFPKAHAAAYVMMAYRVAYCKVFYPREYYTAYYSVRADGFDFDKMCFGVEKLRFYMQE YLEKDKLSATENLCLRDMRICEEMYARGIRFAKLDIYKAKAKDFQITEEGEIMPSFSCIA GLGEAVALGLEEGAKYGPYLSKDDFVQRTHCPKAFADKFHELGLLGEIPLSNQISLFD >gi|333758476|gb|AFIH01000001.1| GENE 1415 1404886 - 1406985 1998 699 aa, chain + ## HITS:1 COG:FN1546 KEGG:ns NR:ns ## COG: FN1546 COG0480 # Protein_GI_number: 19704878 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Fusobacterium nucleatum # 1 690 3 685 690 618 46.0 1e-176 MKVYDTGSIRNVVLLGHGSAGKTTVAECLCYVTKVTNRLGSVDEGNTVSDFDKEEKKRKF SISTSLLPIEYKGEDGDLKINILDTPGYFDFVGEVEEAVSAADAAIIVVNGKAGIEPGTV KAWELCEENHLPRLFFVTNMDDDKASFRQLVLDLEKRFGKSVAPFQLPIRENEKFVGFVN VVKMAGRRFTNLNEYEACPIPDYVEKHLNIARSSLLEAVAESSEELMEKYFAGEEFTTEE IQSALRENVKQCNIAPILMGSGIHVQGFNVLLQVIDKYFPSPKELEAIGVDASTGEHFTA HYNDEATISGRVWKTIADPFLGKYSLFKICTGVLKANFEVYNVNKEATEKIGKLYILRGN TPIEVPELKSGDLGAVAKLSITETGDSIAVRNAPIIYHAPKISTPYTYMAYTAENKADED KLSTALQRMMEEDRTLKVKADPENRQSLIYGIGEQQLEVLAARLKDRYNVSLILTKPKFA YRETIKKTAKVQGKYKKQSGGHGQYGDVVMEFSPSFDYDQAYTFKEQVFGGAVPKNYFPA VEKGIQESCKKGPLAGYPVVGVQAVLLDGSYHPVDSSEQAFKTAASMAFKDGFMQANPVL LEPIARLTVNVPDSYTGDIMGDLTKRRGRILGMNAVHGGKQLIEAELPMSNLYLYNTDLR SMTGGSGSFSFEFDRYEQAPGDIQNIVIQEAKDRAAAEE >gi|333758476|gb|AFIH01000001.1| GENE 1416 1407255 - 1407710 281 151 aa, chain + ## HITS:1 COG:CAC3531 KEGG:ns NR:ns ## COG: CAC3531 COG1943 # Protein_GI_number: 15896768 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Clostridium acetobutylicum # 7 151 5 149 157 193 64.0 9e-50 MAKKEYALAHTKWMCKYHIVFTPKYRRKIIYYQYKSDIRDIIKQLCAFKGVEIIEGHLMP DHVHILVSIPPKISVSSFMGYLKGKSALMIFDKHANLKYKFGNRHFWAEGYYVSTVGLNE ATIKKYIQDQEKHDIALDKLSVKEYEDPFKG >gi|333758476|gb|AFIH01000001.1| GENE 1417 1407930 - 1408646 365 238 aa, chain - ## HITS:1 COG:no KEGG:Clole_3964 NR:ns ## KEGG: Clole_3964 # Name: not_defined # Def: ABC transporter # Organism: C.lentocellum # Pathway: not_defined # 1 236 1 236 238 238 61.0 1e-61 MNSFFYSVALQWRLDIRSKSLLVTCYIVPLIFFLLMGGIFTSVMPEMGNTLIQSMIVMSV SMGAFIGFPPLLIETYGSDIKKIYKANGAPIYLGLVTMYLSAFVHLMISCLVIVLLAPIL FKAILPTQLSIFFLSLSLFIIVSLSIGSILGLIVRNPAKLTMITQLVFLPSIMLSGIMFP IHLLPDFLAILGRFFPAYWGYRLMLDHGFHLENLWYLILVFCLAVIACTVLLNKQKLQ >gi|333758476|gb|AFIH01000001.1| GENE 1418 1408643 - 1409458 351 271 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 5 270 5 305 305 139 31 4e-31 MKNVIQVRGLKKSYGRNIVLKGLDFQIEKGEIFALLGVNGAGKTTTLECIEGLRKYDGGI ISVNGKMGIQLQSSSLPAHIKAMEAINLFTKWNNTTLDYATLNSLGIKEMEKSQYIQLST GQKRRLHLALALVGNPDILFLDEPTAGLDVEGRLSLHNLIRDLKSHGKTIVLASHDMAEV ESLCDRIAILNSGNIVFCGSASELTEKIGRKYFIHFKTQEGDKSLETDNIEDTLISLLNG FKQKKIHVLDIKVDRGTLEQHFIELARREAK >gi|333758476|gb|AFIH01000001.1| GENE 1419 1409461 - 1410255 404 264 aa, chain - ## HITS:1 COG:SPy1863 KEGG:ns NR:ns ## COG: SPy1863 COG0789 # Protein_GI_number: 15675682 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 11 140 4 133 245 81 34.0 2e-15 MTKYRAIPPGFMTVGEIAKKMGVTIRTLQYYDKEGLLTPSAESEGGRRLYTDKDLLMLNQ IISLKSLGFSLEDIKGRLFPLETPEEVANALSEQAEDIRKKIEKLKASLSAIEQLKAEVL QIQTVNFKKYADIIVNLQMQNDSYSLIKRFDDDTLDHIRSRFDKKSGSDFMDRFNRLSDE IMQLQKNKVPPESKKCQELVKEYWDLIMEFTNGDMTMLPRLTEVGKIDIATNAWEEKQKI INEYLGPALQIYFSKLGTNPFEEV >gi|333758476|gb|AFIH01000001.1| GENE 1420 1410599 - 1411609 1099 336 aa, chain + ## HITS:1 COG:CAC1746 KEGG:ns NR:ns ## COG: CAC1746 COG0416 # Protein_GI_number: 15895023 # Func_class: I Lipid transport and metabolism # Function: Fatty acid/phospholipid biosynthesis enzyme # Organism: Clostridium acetobutylicum # 4 330 3 328 331 291 50.0 2e-78 MVRIAIDAMGGDLGAKAMVKGAVESLKEEGMKLLLFGEEEVLKQELSPYSYDPERIEIVP CSENISIHESPVMAIRRKKDSSLVRGMLAVKNEEADAFISAGSTGAVLAGGQLVVGREKG VYRPPLAALIPTKNGVCLLTDCGANVDAKPEWLHQFAKMGAIYMEEMLQIKNPSIGLVNI GAEEEKGNSLVKAAMQILKEDTDYNFIGSVEARDIVEGNCSVVVCDAFVGNVVLKMYEGV GKMLLSEITDTMKHSGPLALLAALMLKKPLKKRLKKFDAKQYGGAPILGLKGLVIKVHGN TDGKEVTTAIKQAKEFAEKKLTKKIAEAIDFKEVEE >gi|333758476|gb|AFIH01000001.1| GENE 1421 1411612 - 1411848 428 78 aa, chain + ## HITS:1 COG:DR1942 KEGG:ns NR:ns ## COG: DR1942 COG0236 # Protein_GI_number: 15806940 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl carrier protein # Organism: Deinococcus radiodurans # 3 68 38 102 110 60 45.0 8e-10 MELEKLKKIICHELTNIKEEDITEDTRFVEDLNADSLDVVQIVMGIEDEFGIEIPEEASY QIKTVGEAHKAILKALGQ >gi|333758476|gb|AFIH01000001.1| GENE 1422 1411850 - 1412566 686 238 aa, chain + ## HITS:1 COG:lin1919 KEGG:ns NR:ns ## COG: lin1919 COG0571 # Protein_GI_number: 16800985 # Func_class: K Transcription # Function: dsRNA-specific ribonuclease # Organism: Listeria innocua # 11 227 7 226 229 166 43.0 4e-41 MTEKEEALSALEERLEYHFQNRELLQHALIHPSYSNEMGEAKEASNQRLEFLGDAVLELI SSTVLYHRKPAMQEGLMTKLRAALVCEPALAAVAKALKLSEHIVLGKGEGREGIQYRDSV LSDTLEAIIGAIYLDSGIESASCFVKKNLLNDIEKKQLQMDAKTMLQEYSTAKHLPLHYS LLEESGPFHDRFYRVMVYLGDTEYGMGEGSSKKKAEQNAAYFALEKIKAETGDVFKIY >gi|333758476|gb|AFIH01000001.1| GENE 1423 1412547 - 1415807 2637 1086 aa, chain + ## HITS:1 COG:CAC1751 KEGG:ns NR:ns ## COG: CAC1751 COG1196 # Protein_GI_number: 15895028 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Chromosome segregation ATPases # Organism: Clostridium acetobutylicum # 1 1080 1 1183 1191 520 35.0 1e-147 MYLKSIEVQGFKSFANKTVLDFSPGITGIVGPNGSGKSNISDAVRWVLGEQKVKQLRGAS MQDVIFAGTATRRPQNYASVSISFDNSDHALSLPYEEITVSRRLYRSGESEYRLNGSECR LKDIHELFYDTGIGKEGYSLIGQGQIDKILSGKAEERRALFDEAVGIVKFKRRKDIAEKK LEEEQANLERIQDIVSELEKQVGPLEKQSEKARKYLSFRDELVVLESTHFLQKLQDTEKL LQKLEEAEKDLKATIEAEVKKQNALSESFKGLEEELLLLDEKEQEISRGNEEDESRKKTL EEEIVRLKEAISGKESSSRHFQERVNALKEEASSSIGKMEDLVSALLSMKKKFQSFLLFN TEEEKVKLDIQLIDSTISEAKQIIRSTFYPDFDFDEGIQEKEDAEASSEDAKNFHAIETE IRALKKEGEEKQEAFSHLQRKRADAEKTVTDKRASLQDFLHQKERHRIQLENLQNLAERY EGFGQAVRKCMQEKEREKGLIGVVADVLKTKPEYELALETTLSGSLQNLVTEEEATAKRL LEKLKREKLGRATFLPLSSIRKERDGRYDSVRGEKGLIGVFADFVEVPRSCAGLENYLLS KVLLVDNLDNALAIARKYKHSLRIVTLDGELLQAGGALSGGAYRNSSSLIGRKREIDELV ETLKAMEREEGEKRASLRREEDALQELSSIEAEKREEILSLDKLYREKLLTFQGTVNAER QTLSTRVDFLTEQLHDYGERLEKNFTDQMDLEEENKNTAGSVEKDQNQIHALEDKIRALL EKEEKRKESLSALKNRRAEIAEEEKRFYKEKEGIQEELLQIEKEQLRLEHQKEKLEDQSA QSASQLFEDYGIGVSQAKQYFDENLSDNPALPSIIQEKKAEMKGLGSINLDSIEQYTEVK ERYEFLRKQVEDLISSEESLREIIKDLDSGMRKQFHENFHKIQERFNEVFRVLFGGGSGK IEIDDSEDLLESGISIIAEPPGKKLQNMMQLSGGEKALTAISLLFALQSLKPSPFCLLDE IEAALDDSNVVRFAKYLHHLTKNTQFIVITHRRGTMESADRLFGVTMQEKGISTLVSVDL VEEHLQ >gi|333758476|gb|AFIH01000001.1| GENE 1424 1415884 - 1416756 740 290 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762490|ref|ZP_02169555.1| ribosomal protein L28 [Bacillus selenitireducens MLS10] # 5 289 33 321 336 289 51 3e-76 MANFFSKILNNLFQSDRVADEEFYEELEEAMIQSDVSYPSCMRIIDAVKREADRKGVNLT KDVQKILKDYLLDTMSVDEDYYNFEKEKSIISVIGVNGVGKTTSIGKLAYHLKKKGKKVI LAAADTFRAGAIEQLVEWGNRVGVDCIHQKEGSDPAAVVFDALQSFKAKNADILIIDTAG RLHNKKNLMEELGKINRIIDREFAEGYRETLVVLDATTGQNAMSQAKMFKDCSQVTGVVL SKMDSTAKGGMAISIQAELGLPVKYVGEGEKIEDLKRFDAKKYVEDIFAF >gi|333758476|gb|AFIH01000001.1| GENE 1425 1416937 - 1417911 227 324 aa, chain + ## HITS:1 COG:DR0205 KEGG:ns NR:ns ## COG: DR0205 COG4586 # Protein_GI_number: 15805241 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, ATPase component # Organism: Deinococcus radiodurans # 1 320 46 342 354 268 41.0 8e-72 MIEVEHITKVYKVAKREAGFHNAVKALFSRKQDTVRALNDISFKIDDGEILAYIGPNGAG KSTTIKILCGILTPDKGNCIVDGYVPWKDRKSYVKNIGVVFGQRSQLWWDIPIIDSFELI KDMYDIDSRTYKQNVSELCQLLDLEKIVKTPARNLSLGQRMRCEIVASLLHNPKILFLDE PSIGLDAISKLAVRDFIKRINAEKGTTVILTTHDMQDIEALTHRVMLIGKGQILLDGSIE ELKKRVSDKKEIIIKHHGKTPELCEGMNFLEQKEDKLRISLDPKMISVSEGIAYLSRETE LIDLEVSDISAEEMVARLYKEYQI >gi|333758476|gb|AFIH01000001.1| GENE 1426 1417908 - 1418528 193 206 aa, chain + ## HITS:1 COG:no KEGG:Cphy_2674 NR:ns ## KEGG: Cphy_2674 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 1 200 1 200 267 182 52.0 7e-45 MKKYLLVFRIRLINNIQYRMVTFGAIASNIVWVLLELMIYMALYNSAGHVLPMTFSQIVS YVWVKRIVMNMLAVVAYDGEIYSVINNGAVAYELVRPMDLYGKWYSQAVANRVTSTMITC IPVLLIAIILPEPYRLQFPMSVLQVFAFIVSVILALGLVVAFAMIMFITLFYTIAQRGIK IIVTAVSSFLSGGMIPITFFLKRYSL >gi|333758476|gb|AFIH01000001.1| GENE 1427 1418528 - 1418710 132 60 aa, chain + ## HITS:1 COG:no KEGG:Cphy_2674 NR:ns ## KEGG: Cphy_2674 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 1 60 208 267 267 71 58.0 1e-11 MKYLPFSSMQSTPLLIYSGNITGTEILKGIAMQILWMLILILIGKVLMNHSIKHVVVQGG >gi|333758476|gb|AFIH01000001.1| GENE 1428 1418716 - 1419492 326 258 aa, chain + ## HITS:1 COG:DR0204 KEGG:ns NR:ns ## COG: DR0204 COG3694 # Protein_GI_number: 15805240 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Deinococcus radiodurans # 1 258 13 277 277 95 27.0 1e-19 MRVYLRMMILNLESQMQYKISFFMTVLGQFITAFAGLFSIEFIFEHVDKIYGFNYTDVIL CYAIVVLSFSIGEAFAGGLARFGSILGNGEFDRALVRPGNVVLQVLAPSVDFTRIGLLIQ SVGTLAYAIGRSAIQWDYKKIITLVLMVVCGSILFFSMFLFKATFTFFTVQDLDFLNLFT YGAKEYGKYPFSIYGKTVLSILTYIIPLALFQYYPLLYLIGRKSEVYYIGFPLLSLIFLI PCCLFFKFGVRRYKSIGS >gi|333758476|gb|AFIH01000001.1| GENE 1429 1419609 - 1419893 127 94 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVLLYLIIGILFIRANGRAIRYLTGHDLDENISNKSKELCIICGKQIMKWSVCFIIGFAI DLLWVGAGLILAAILNTVLIFRLMVLRVHFENGK >gi|333758476|gb|AFIH01000001.1| GENE 1430 1420055 - 1420369 289 104 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227872400|ref|ZP_03990747.1| ## NR: gi|227872400|ref|ZP_03990747.1| transcriptional regulator [Oribacterium sinus F0268] transcriptional regulator [Oribacterium sinus F0268] # 1 104 1 104 104 129 68.0 8e-29 MDEFVEKGNLFLLYSGLLKENQKKVYAYHIMEDMSFSEIGIEMNITRQAAQYLYSKADEK LRFMEENLQLGKKWLHIRALAERIAEQSGDEEIRKLAGEIMHGI >gi|333758476|gb|AFIH01000001.1| GENE 1431 1420359 - 1421741 1567 460 aa, chain + ## HITS:1 COG:BH2484 KEGG:ns NR:ns ## COG: BH2484 COG0541 # Protein_GI_number: 15615047 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal recognition particle GTPase # Organism: Bacillus halodurans # 1 429 1 429 451 453 57.0 1e-127 MAFESLSERLSTIFQGLSGKGKLSEDDVNLALKEVRMALLEADVNFKLVKDFVAKVKEKA IGEEVFSSLSPAQTVIKIVKDELTAMMGEENTELKLRPQSEITVLMMVGLQGAGKTTTAA KLAGKFQKMHRKPLLVACDIYRPAAIEQLRVNAEKLSIPFFSLGNQVKPEEIAKRAYEEA KEKGYNLLILDTAGRLQIDDALMQELKRMKAAVPVDWTILTVDAMTGQEAVNVSQSFSED IGVDGVILTKCDGDTRGGAALSIKAMTGQPILFLGMGEKLVDLEPFYPDRMAGRILGMGD VLSLIEKAQSEIDEEKAKESVRKLSKGQFNYDDFMEQMNQLQKLGGIAGILKMLPGMNKA MQGIDLEDSEKKMKQVKCIIQSMTFKERANPKLMNPSRKKRIASGAGVDISEVNRLVKQF EEMQKMMKQFGGGRGKHGSPFGGGFPGMGMKGMGGKGFPF >gi|333758476|gb|AFIH01000001.1| GENE 1432 1421895 - 1422134 391 79 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227872398|ref|ZP_03990745.1| ribosomal protein S16 [Oribacterium sinus F0268] # 1 79 1 79 79 155 94 9e-36 MAVKIRLRRMGQIHAPYYRVIVADSRSPRNGRFIEELGYYDPTKEPTVFKVDAEATKKWL QNGAQPTETVARLLKKFNI >gi|333758476|gb|AFIH01000001.1| GENE 1433 1422146 - 1422385 57 79 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|120437355|ref|YP_863041.1| 30S ribosomal protein S16 [Gramella forsetii KT0803] # 1 70 78 144 198 26 30 6e-15 GDAVMKELLETIAKALVQFPEDVHAEMEEKEGEVFLTLSVNEQDMGKVIGRSGRIAKAIR SVMNAAASKQNKRISIDIQ >gi|333758476|gb|AFIH01000001.1| GENE 1434 1422519 - 1423043 178 174 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163796730|ref|ZP_02190688.1| 50S ribosomal protein L19 [alpha proteobacterium BAL199] # 1 159 1 151 179 73 29 5e-11 MLEELRVGIVGKPHGLKGELKIFPTTDDPKRFSALKEVILKKESKGLISKEEREEREVSA VRYHKDTVLLSLKGIDSIELAEKYRDYSLYVKREEALSLAEGEYFLGDYLGMEVFVEGEE SLGQVSELIETGANLVFVVKGKDKEYLIPHVPAIVYSIENNRIHIHTIPGLLEL >gi|333758476|gb|AFIH01000001.1| GENE 1435 1423040 - 1423771 548 243 aa, chain + ## HITS:1 COG:SA1083 KEGG:ns NR:ns ## COG: SA1083 COG0336 # Protein_GI_number: 15926823 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-(guanine-N1)-methyltransferase # Organism: Staphylococcus aureus N315 # 2 234 1 232 245 249 51.0 4e-66 MMKFTVLTLFPEQVEAAFSHSIMKRAMEDGKIELCCINIRDYTKDPHGHVDDSPFGGGAG MLMQAEPIYEAFSELQEKENPTKVIYCSPRGKIFSQKIAEELARESHIVFLCGHYEGVDQ RALELLNAEELSLGDYVLSGGELACAIMMDAISRVREGVLNKKESYEEESFSNGLLEYPQ YTRPRVYKGLTVPDVLLSGDHKKISAWRHEESLKLTEEVRPDLYKLYRERNPEEFQPKKK RRK >gi|333758476|gb|AFIH01000001.1| GENE 1436 1424078 - 1424917 459 279 aa, chain + ## HITS:1 COG:lin0750 KEGG:ns NR:ns ## COG: lin0750 COG1131 # Protein_GI_number: 16799824 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Listeria innocua # 2 274 6 294 301 141 33.0 1e-33 MLEIKDLKKSFKAKEVLKNLNFSINEGEIVCLLGNNGAGKTTLINCILRMIQANSGSILL DGRDIFTYKNKEYFSKVNALLESSVNVYDYLTGWQNIEYFSGLLNIDSGNEKIKTYISLF ELEEAIHEAVGTYSRGMRQKLALLIALMSSPKLLLLDEPTLGLDIQSKLSVIQILNTIIK TEKISVLLTSHQMDVVQKLQSRILILKDGVVDEFDKTDYEDKDLYIVSYMKDNKLESDAV RGSFQDIYQSYYGKHEIMEIRKKERDLEEMLLEVFHETD >gi|333758476|gb|AFIH01000001.1| GENE 1437 1424904 - 1425611 540 235 aa, chain + ## HITS:1 COG:no KEGG:LC705_00021 NR:ns ## KEGG: LC705_00021 # Name: not_defined # Def: ABC transporter permease # Organism: L.rhamnosus_Lc705 # Pathway: not_defined # 1 230 3 243 250 119 33.0 9e-26 MKLIKAEFKKSLIEAASYYPDYIVGILTDLLLLVIVMNTEGEQEEKLFAYVLWILVNGVL SEASLCISTEKQQGTLQNLMIKPYSIMQIISVKTLVWFLLNSVKACICIGIASLFIKLTF RFEYFYIVVLVCFGCMGISYILSALTLIFTKMASFVNIVGYLFLFLSGSILSLPEYLNYT NPLSAGSHFYARMIHHTASVKDFFILMMLCAVYFFVGKEIFAFVFRRSKQFKWTY >gi|333758476|gb|AFIH01000001.1| GENE 1438 1425757 - 1426125 559 122 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227872394|ref|ZP_03990741.1| 50S ribosomal protein L19 [Oribacterium sinus F0268] # 1 122 1 122 122 219 88 3e-55 MEDLYMSNFEIIREIEQAQLRQEALAPFNTGDTIKVYNKIKEGNRERTQIFEGTVLKIQG GSNRETFTVRKSSNGVGVEKTWPIHSPFVEKIEVVRKGKVRRAKLNYLRDRVGKAAKVKA AK >gi|333758476|gb|AFIH01000001.1| GENE 1439 1426185 - 1426712 359 175 aa, chain + ## HITS:1 COG:slr1377 KEGG:ns NR:ns ## COG: slr1377 COG0681 # Protein_GI_number: 16329775 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal peptidase I # Organism: Synechocystis # 37 174 48 188 218 90 34.0 2e-18 MKERTIFQKFIHTLVDILVLLSLAWFIVYSFFSLYRVSGHSMETALSTGDTVLIDELSYR FIKPKRMDIVLFQRADKSYNMKRIVGLPGETVIIQNGRIYINGELLETTKISPIALPGLA KNPVELGKDEYFLIGDNTDSSEDSRFQNIGNVHFQQIRGRVWFRLLPLRKMKLIV >gi|333758476|gb|AFIH01000001.1| GENE 1440 1426726 - 1427604 883 292 aa, chain + ## HITS:1 COG:BH2476 KEGG:ns NR:ns ## COG: BH2476 COG1161 # Protein_GI_number: 15615039 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Bacillus halodurans # 1 283 1 282 284 256 44.0 3e-68 MKIQWYPGHMAKAKRKMKEDLPLVDAIIEVIDSRCPNSSRNPEIDILAKDKARIMLFNKA DLADPARTKSFMESFQKQGFYTMEMDARSRSSVKGVNKLVMESCAELLERKKQKGILSQS IKAMVLGIPNVGKSTFINAYVGKATAKTGNKPGVTKGAQWIKIGKDLQLLDTPGITWPKF EREIVGLNLALIGSINDEILPIEELIFYLLKYLTRYYGSALVSRYGETLLGKEEALEAMD AIAIKRACIKKGGDIDYTKVSRLILDDFRSGRLGRISLEHPMKWEEDSRMEV >gi|333758476|gb|AFIH01000001.1| GENE 1441 1427692 - 1428336 604 214 aa, chain + ## HITS:1 COG:BS_rnh KEGG:ns NR:ns ## COG: BS_rnh COG0164 # Protein_GI_number: 16078669 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HII # Organism: Bacillus subtilis # 29 208 74 248 255 179 53.0 3e-45 MTDKAREKEELRLEEMRIEERTVLELSPIAGVDEAGRGPLAGPVVAACAVIPLDYPFYYL NDSKKMSEKRRESLFEDLQKEAIAFGIGIVSPERIDEINILQATYEAMREALKDMEKHFS LSPKILLNDAVTIPGISIPQKAIVHGDAKSLSIAAASVLAKVTRDHIMLKYDEQYPEYGF KQHKGYGTKVHREAILTHGPCPIHRRSFLKNLYR >gi|333758476|gb|AFIH01000001.1| GENE 1442 1428443 - 1428805 326 120 aa, chain + ## HITS:1 COG:YPO3549 KEGG:ns NR:ns ## COG: YPO3549 COG0792 # Protein_GI_number: 16123693 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease distantly related to archaeal Holliday junction resolvase # Organism: Yersinia pestis # 13 120 7 114 117 70 34.0 9e-13 MRSNKAKNTHLLGQKYENMAVEYLEAMGYSILERNARFHHLETDIIARDVEYLCFIEVKG RKSGSLSSPYEAVSRKKIQFLRTMAEGYLVKQHLSLYDTPCRFDVLCISGEEIELIKNAF >gi|333758476|gb|AFIH01000001.1| GENE 1443 1428795 - 1428914 62 39 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MHFSYLRTDLSYFKMEKCVLHMMLFYKMIYYFSSFEREE >gi|333758476|gb|AFIH01000001.1| GENE 1444 1428933 - 1430084 1099 383 aa, chain + ## HITS:1 COG:L0358 KEGG:ns NR:ns ## COG: L0358 COG0180 # Protein_GI_number: 15672048 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Tryptophanyl-tRNA synthetase # Organism: Lactococcus lactis # 11 365 3 341 341 397 58.0 1e-110 MEEKSKNKNERKVILTGDRPTGKLHLGHYVGSLQRRVELQNSGEYDEINILIADDQALTD NYDNPKKIRDNIIEVALDYLSVGIDPAKSTICIQSALPALHALSFYYLNLVTTQRLSRNP TVKAEMKQKGYSGENENDNEAGLPAGFFTYPVSQAADITAFKATTVPVGEDQLPMIEQTK EIVRRFNQLYQREVLLEPEILLPKNSSQRRLPGIDGKAKMSKSLGNGIYLSDDEKTVKTK IMSMYTDPSHINITDPGHVEGNTVFTYLDAFSKQEDFAEFLPEYANLEEMKEHYRRGGLG DVKCKKFLLKVMENMLSPIREERKRWENRISDVYDILYQGTEKAKETTNATLEEVRDAMR INYFKGNEIIGEWDKWVHGSQEG >gi|333758476|gb|AFIH01000001.1| GENE 1445 1430057 - 1430605 382 182 aa, chain + ## HITS:1 COG:lin2005 KEGG:ns NR:ns ## COG: lin2005 COG3331 # Protein_GI_number: 16801071 # Func_class: R General function prediction only # Function: Penicillin-binding protein-related factor A, putative recombinase # Organism: Listeria innocua # 8 149 30 175 201 115 41.0 6e-26 MGTWKSRGLRGSLLEEELNQTISLYREKNLALIQKIPTPITPIELDKSHKQITLAYFDRK STVDYVGVVQGIPVCFDAKECHKDSLPLQNLHAHQMAFMQDFMKQGGISFIILSFTERNE IYYVPLRELQRFTKRMEEGGKKSFRYDELLCSHRIYRKKDLLVHFLEALNEDILLLNEMS SE >gi|333758476|gb|AFIH01000001.1| GENE 1446 1430763 - 1432163 1259 466 aa, chain + ## HITS:1 COG:SP0480 KEGG:ns NR:ns ## COG: SP0480 COG0569 # Protein_GI_number: 15900395 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transport systems, NAD-binding component # Organism: Streptococcus pneumoniae TIGR4 # 1 440 1 435 449 293 35.0 7e-79 MNIIVVGCGKVGLNLADQLNKEGHNITIIDNDEKELRHAVDFLDVMGIHGNGAMPQTLRE AGISDADVLIAATNQDEVNMLCCLFAKKEGHCSTIARIRDPQYTTEIKYLRDELNLAMVI NPEMAAAREIERLLRFPSAIKIDSFSRGRLDLIRAKVPENSKLVGIPFYSLKNEIGLDVL VCCIERGEDVLIPKGSDCFMAGDEISFIASPKDITDFFLKLGLEYTPVRDCMIVGGGRVS YYIAKYCKETHLKLKLKIIETNRERCEFLAEEFPECSIINGNGIDQELLKREGIETTDAF CSLTGFDEENIMLSLYAGKLSDTRLVTKVNRISFENVIREMNLGSVIYPKQIIADSIVRY VRALENSKGSNVETLYKIADGRAEAMEFRVLNDPDLINRSFSDMNFKDGVLICGIIRNHK VITPNGSDMMKVGDRVIVVTKNTGYNDLRDILEEKVEEESVIHYEL >gi|333758476|gb|AFIH01000001.1| GENE 1447 1432153 - 1433601 1145 482 aa, chain + ## HITS:1 COG:FN0993 KEGG:ns NR:ns ## COG: FN0993 COG0168 # Protein_GI_number: 19704328 # Func_class: P Inorganic ion transport and metabolism # Function: Trk-type K+ transport systems, membrane components # Organism: Fusobacterium nucleatum # 1 482 1 483 483 379 46.0 1e-105 MNFSMIVYILAWVLKIEGISMILPLICSLLYRENDIALCFFFIGAASILLGYILTAKKPK KIAFYAREGFVIVAACWVVLSLVGALPFFISGRIPHYIDALFEIVSGFTTTGSSVLSDVE ALGKGLLFWRSFSHWIGGMGVLVLVLTVLPLGGGYNMMIMKAESPGPEVSKMVPRVADTA KALYKIYFILTIIMIVIFLLSGMPLFDALCIGFGTAGTGGFAIRNSGMADYSMLSQFLIT VFMILFGVNFNVYYLIQRKKFSDAFHSEEARGYLIIIAASTLFITLNIFQSIGRGFLFAL HHAFFTVGSIITTTGFSTLDFNEWAMPSQMVILFLMICGACAGSTGGGLKVSRLLILLKS LGKEMHLIIHPEAIRKVRLEGKCLDHAVVRSVSTYLIAYCFIYMISIFLISFDGYDFMTN FSAISATFNNIGPGLGKVGPLSNFSVYSYFSKLVMIFDMLAGRLEIFPMLILFSIKTWRK TN >gi|333758476|gb|AFIH01000001.1| GENE 1448 1433978 - 1435057 925 359 aa, chain + ## HITS:1 COG:Cgl1981 KEGG:ns NR:ns ## COG: Cgl1981 COG0582 # Protein_GI_number: 19553231 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Corynebacterium glutamicum # 72 332 64 294 315 119 28.0 8e-27 MALAYHEELDKKNTLKLRKLQKDLPAFCNAFFRGIDQITASRTKIAYAYDLKVFFTYLME ELKLHDSIEQFTISDVENCSIPELEEYMEYLKYRTKKKKNADGEMETVDILNHNKSIKRK ISSLKSFYNYLYKAGLISSNKASLLSLPKLSQEEIIRMDQGEIAEFLDEVENGNQLSKKE REFHEKNNVRDLAMMQLMLGTGIRVSECVGLNLSDLDFNNNGIRIHRKGGKNVTIYFSDE VESGLRAYLEERKLKIPASGHEEALFLSIQNKRISVRSVEKMVKKYAGRVTPLKHITPHK LRSSYGTNLYQETGDIYLVADVLGHSDVNTTKKHYAALEEERRRSVRNVVRLRKEEGES >gi|333758476|gb|AFIH01000001.1| GENE 1449 1435162 - 1435563 359 133 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|291459077|ref|ZP_06598467.1| ## NR: gi|291459077|ref|ZP_06598467.1| conserved hypothetical protein [Oribacterium sp. oral taxon 078 str. F0262] conserved hypothetical protein [Oribacterium sp. oral taxon 078 str. F0262] # 1 133 1 133 133 99 41.0 8e-20 MLEKWSEPGLGKHVVESLELRVEDEEAFLQIQKEVSELDSLLKKYGMKLSLSQNKEEKSI LKWDIALDRLKRAAGKKRDYGSAKKVSEVFLYSKLHKSAEVAEYAGVQLRTYQRRVKKYK EEQRWNEENSSFF >gi|333758476|gb|AFIH01000001.1| GENE 1450 1435576 - 1436334 631 252 aa, chain - ## HITS:1 COG:CAC1832 KEGG:ns NR:ns ## COG: CAC1832 COG1974 # Protein_GI_number: 15895107 # Func_class: K Transcription; T Signal transduction mechanisms # Function: SOS-response transcriptional repressors (RecA-mediated autopeptidases) # Organism: Clostridium acetobutylicum # 17 249 11 202 204 181 44.0 1e-45 MGRPKKVYSIDNLTEKQKEIYEYIKDCVQKRNYPPSVRDICAKVGLKSTSSVFTYLNDLE KLGLIRKDPAHPRAIEILNREGLSLERKQNEEQNNDSGTVDSSIEKDSSIEKTTSDEDTV STEAYGEEMAALPIVGTVAAGTPIFAEENITGNIPFPVNLLPNQESFILKVKGDSMINIG IFHGDYLIVAKQNTCAQGEVVVALVDDSATVKRFYKENGHIRLQPENDGMDPIIVEDCTI LGKAVGLIRLGL >gi|333758476|gb|AFIH01000001.1| GENE 1451 1436464 - 1436790 413 108 aa, chain - ## HITS:1 COG:SPy0310 KEGG:ns NR:ns ## COG: SPy0310 COG0799 # Protein_GI_number: 15674477 # Func_class: S Function unknown # Function: Uncharacterized homolog of plant Iojap protein # Organism: Streptococcus pyogenes M1 GAS # 1 103 9 115 125 87 45.0 6e-18 MESEALAKKIMTILEEKKATDILALDISEISTLADYFILASAENVRQLDALEDAVEEDVR LEVNKEGESSSGWILMDYRDIVVHLFTKEQRVFYDLEKIWSDAKRMEM >gi|333758476|gb|AFIH01000001.1| GENE 1452 1436871 - 1437482 524 203 aa, chain - ## HITS:1 COG:CAC1263 KEGG:ns NR:ns ## COG: CAC1263 COG1713 # Protein_GI_number: 15894545 # Func_class: H Coenzyme transport and metabolism # Function: Predicted HD superfamily hydrolase involved in NAD metabolism # Organism: Clostridium acetobutylicum # 14 195 7 187 189 131 40.0 1e-30 MIEEKEYLEKIKSIRKHLKEHLQENRYEHSISVSFSAIALAMAHGYDLQAAELAGLCHDC AKFMGKKELISACEREHIPLLPEYIAAPQVLHGIYGATYARKHFQIQNEEILSAIYYHTI GKPAMSLLEKIIYLADYIEVRRGYREELEEVRRVAFTNLDEAMYLALSQTIQYVEEKGQP LCTSSLEALRYYQARSEEAPEIQ >gi|333758476|gb|AFIH01000001.1| GENE 1453 1437542 - 1437619 70 25 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLPELAICGNGIIVKLYFYRWQEDL >gi|333758476|gb|AFIH01000001.1| GENE 1454 1437637 - 1438479 325 280 aa, chain - ## HITS:1 COG:BS_yqeJ KEGG:ns NR:ns ## COG: BS_yqeJ COG1057 # Protein_GI_number: 16079618 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid mononucleotide adenylyltransferase # Organism: Bacillus subtilis # 22 280 1 188 189 100 27.0 3e-21 MDKQNLCFSLSDIENGLCFPSVQKLGILGGSFNPVHYGHLILGRTALKALEAQECKQCER KWIPYKRELPDYDKQKDSTIASASEDGVTEEGKNCFLSNECVLFLPTGLPYHKENTDLLS FSARSEMLRLALQEENRKLAFEQDGLTKFFFSTMEGERSGNSYTYDSAVLLKKIFPYAEL FLIIGTDEFYTLENWYKTEELGKMLRFLVANRNGEAEQKALEERTVFLKINYGLQCTFLE MERIEYSSSLIRKRIKEKASIEGMLPEPVIEFIQKNRFYE >gi|333758476|gb|AFIH01000001.1| GENE 1455 1438479 - 1438778 184 99 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|146318023|ref|YP_001197735.1| RNA-binding protein [Streptococcus suis 05ZYH33] # 5 97 1 93 102 75 34 9e-12 MKSYIVDSKMRARIRSAAQSIDPVLSVGKNALTPEFTRSVEEYMEKHEIMKINVLKNCDE DLHELGNTIAERSNTELVQIIGRKIVLYKPAKEEKNRAF >gi|333758476|gb|AFIH01000001.1| GENE 1456 1438775 - 1440103 1437 442 aa, chain - ## HITS:1 COG:CAC1260 KEGG:ns NR:ns ## COG: CAC1260 COG0536 # Protein_GI_number: 15894542 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Clostridium acetobutylicum # 1 427 1 422 424 377 48.0 1e-104 MFADVAKIYVRSGKGGNGHVSFRRELFVPAGGPDGGDGGKGGDIIVEVDDGLNSLDSFRH KTKYTAGDGQEGDGRKMHGKNGKDLILKVPAGTLLKDAETGKVIADMSGENRRIVLLPGG KGGLGNMHFATPSMQAPKFAQPGQEAREITLRLELRVIADVGLLGFPNVGKSTLLSMCSN ARPEIANYHFTTLNPHLGVVNLKGDRSFVMADIPGLIEGASEGVGLGFQFLRHIHRCRVL IHLVDGAGSEGRVPLEDLKSIHAECKSYDPEILKKPIIVAANKVELIQSEEQEEALKDLE KYCKEMHYPFFKISAASNQGIYPLLEEAYKLLEGISKEEMLYESEVDLESLGAVESLPIK YEHPEEGLFLVEGPKMEKMLGYTNLEAEKGFLFFQRFMVEQGIIKELKKMGLKEGDTIKI FSHEFEYYDDEAADENESGEEE >gi|333758476|gb|AFIH01000001.1| GENE 1457 1440168 - 1440425 422 85 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227872366|ref|ZP_03990717.1| ribosomal protein L27 [Oribacterium sinus F0268] # 1 85 1 85 85 167 95 2e-39 MAHHKGMGSTKNGRDSNSKRLGAKRADGQFVKAGNILYKQNGTRIHPGQNVGLGNDFTLF AKVDGVVKFGRLGRDRKQVSVLPRA >gi|333758476|gb|AFIH01000001.1| GENE 1458 1440478 - 1440783 491 101 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227872365|ref|ZP_03990716.1| possible ribosomal protein L21 [Oribacterium sinus F0268] # 1 101 1 101 101 193 95 2e-47 MYAVIVSGGKQYKVSEGDVIRVEKLEVEEGAKVSFDQVLLINDGSLKIGTPTVKGAKVSG TVLQNGKGKKVIVYRYKRKSGYHKKNGHRQLFTEVKIDKIG >gi|333758476|gb|AFIH01000001.1| GENE 1459 1441004 - 1442869 1325 621 aa, chain - ## HITS:1 COG:no KEGG:Closa_2016 NR:ns ## KEGG: Closa_2016 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 75 620 71 536 537 249 34.0 4e-64 MIYFFKWIKIAKEKMKRIGTKKCIIVLSFIFLGLLYLKNTSEKKEEVPVAEPVVSSSTLP TMKLYYDRAEDVFLNYSPKIDVYNLFYEKNKEGQSIGDQFYKEMMSMDSRYLASITDEAG ETPEKVAKSLGIKRSRIMGKYNPAIQGENENRSASYPVAYFKNIHYRFLNGDGQEIEDSS NVKDILAMVSVYSYKHNYLDIEHFKEICQELYLKSHSYSLSISPVYYDDGCVNLSAKEEA ENAGGKSVEEIQKEEKQTEGMEETKKDSAESASETQIGKEVEEQEEKLSGKQIEDGKVAE NQKIEGTVSSTGAPESSASTESTEESSASDPAEEANKERKEGENDSSKVSPSEMENGSAK KAKKTTESSEKKSLPKNYCPGHVDLTITIQVKKFGDQNGLKEIILDSLKKDEPFDNMPSS RWKGWNEECINAVNQLIDTDWFNAYGLSLSTVETKMPLSEEEISRYMSMLPENLSAERKN VIYYALSAVGKVPYYYGGKAAKQGLDGNQFGKTVGRDYKGRNKKGLDCSGFVQWAYWSGT ENPLDFASSTKELVGKGNKIKRSELIPGDLVIQPSGESHVVMFLAWTEEGQMLAIHENST AGTVSVDEVSANYPYYRSILP >gi|333758476|gb|AFIH01000001.1| GENE 1460 1442996 - 1443910 338 304 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit [Lactobacillus helveticus DPC 4571] # 35 296 37 285 285 134 34 1e-29 MVFIVEDVDAGKRLDSFLAEKNTAKYTRSFIGKMIEENLVLYNGKPSKASTKIKTGDRIE LFEKEPEPLAVKGEEIPLEIVYEDDDLMVINKPRGMVVHPAPGHTSGTLVNAVLSHAGES LSSINGVLRPGIVHRIDKDTSGLILVCKNDFSHKALAKQLEEHSITRRYHAICSGRLKEE QGTVSAPIGRDEKNRKQQAINYKHGKEAITHYRLLENLQNASLLECRLETGRTHQIRVHM KSIGHPLLGDPLYGPKKNLYAIKGQALHAMVLGFVHPRSEEYMEFSADYPEDFQKLLNKL RISR >gi|333758476|gb|AFIH01000001.1| GENE 1461 1443910 - 1444479 421 189 aa, chain - ## HITS:1 COG:SPy0826 KEGG:ns NR:ns ## COG: SPy0826 COG0597 # Protein_GI_number: 15674864 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Lipoprotein signal peptidase # Organism: Streptococcus pyogenes M1 GAS # 9 176 5 151 152 101 40.0 1e-21 MNKIRRYLLFFTLAAVLVGMDQWTKHWAVSTLKAGTEISLIPHTLSLVYVENPGAAFGIL HGQQGFFLLITVIVLTGILYVLWKLPLHCKMNNFGGERVRKNKGKSYYPLFVALCFVFSG AIGNFIDRQLQSYVVDFIYFSPIDFPVFNVADIYVTCASFLLVYLLGFYYKEEDMGFLKK TSKQNEAEN >gi|333758476|gb|AFIH01000001.1| GENE 1462 1444480 - 1445574 716 364 aa, chain - ## HITS:1 COG:RSc2969 KEGG:ns NR:ns ## COG: RSc2969 COG0337 # Protein_GI_number: 17547688 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate synthetase # Organism: Ralstonia solanacearum # 43 360 36 360 368 239 40.0 6e-63 MQGADMRKLDIYEKDFHSYSIYLEKNFSGISEKLKELDCKEQKVLIVTDDHVAPLYLKEL EDKIRSSFSSMESVVLPSGEENKTLSHISTIYEAAIAFGLQRKDFMIALGGGVVGDMTGF AAATYLRGIRFIQIPTTLLAQVDSSIGGKTGVDFQHYKNMVGAFHMPCLVYSSMHTLSSL PALQYASGMGEIIKHALIHNPKYLPYLMEHRQGLIEKDADTLLETIYQSNRIKKYFVEKD PFEHGDRKFLNFGHSLGHAIEKVADFSYSHGQCVAFGSLMALSLCAGISEEERKSIEELM QDLSLEVRCKKMDFESVFSAMKKDKKQNKDHLQFILLHHLCSPYIDEALEKETLEQAFYR FVED >gi|333758476|gb|AFIH01000001.1| GENE 1463 1445620 - 1446144 470 174 aa, chain - ## HITS:1 COG:BH2549 KEGG:ns NR:ns ## COG: BH2549 COG1799 # Protein_GI_number: 15615112 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 27 156 9 140 149 69 29.0 3e-12 MSFLSNLMTKMNLNRDSDDDYDLDHDYDFDDEYEEEEEEAPRKPSFFGRRVDEEEEAEPK IRFFSKAKSNTNERRASMEVTMIKPNSMGDATEICDYLLSGRAVVLNMEGLHTEVAQRII DILSGTAYAINGNLQKISTYIFIISPEEIHLSGEFSGAGFGGDGEGTFGALNFR >gi|333758476|gb|AFIH01000001.1| GENE 1464 1446235 - 1447557 989 440 aa, chain - ## HITS:1 COG:no KEGG:Closa_2034 NR:ns ## KEGG: Closa_2034 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 2 440 40 479 479 311 37.0 5e-83 MIIALYILFSVISFLRRDQIRFYEVREGSLVRENQYTGLILREEKAYNAVKSGYIHFTVS EGRRVSKGAELYTLDETGNLEKYLSDHPELQENLSEQQIMEIRNRLESFSRSFRDDEFYS LYAFPSGMDGDNLAFSGEDGIKYLNSILNQLGISYTVENAKEAGVVSYILDGYENWKEED LSADTFRNANGKKVYIHGGDRVEEGTEIYKIISSSNWSLVFPLTEEERNNLENRHKVTLS FSNPDLELSGELFFIHGKDGALYGKVELKNYIDYFLEDRFVEFSLKEKEESGLKIPASAV VQKEFYVIPNEFLAVSADGSQGFYRQESDGSTKFIATEIYRKDQQFSYISIPKDEDSHVL KTGDVLRKEGSSDSYSIGPTKSLEGVYNINKGYAVFRQIIPLEKNDEYIIVEKNTSSGIE VYDHIVLQGDMVSDGQLIFQ >gi|333758476|gb|AFIH01000001.1| GENE 1465 1447623 - 1448042 510 139 aa, chain - ## HITS:1 COG:no KEGG:Closa_2035 NR:ns ## KEGG: Closa_2035 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 139 1 139 139 137 53.0 2e-31 MVQFIVGQRGKGKTKQLIEKANSTVKEAKGNVDFLDRSAQHMYELNNKIRLINVNEFQLD SEDAFIGFVSGIISQDHDLEYLFLDSFLKLASLEGKPITDCIRKLDLLSDKYKVNIVSSL SMSPDEVPADLKDHIALAL >gi|333758476|gb|AFIH01000001.1| GENE 1466 1448118 - 1449065 456 315 aa, chain - ## HITS:1 COG:BH1573 KEGG:ns NR:ns ## COG: BH1573 COG1686 # Protein_GI_number: 15614136 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Bacillus halodurans # 60 297 33 253 382 136 38.0 5e-32 MLILSFCVSCERKPEKAFSEEQCIQRLTSLSWGTEANHTAQSFAAKLAIPVDQSYNEQEM DTESFLLVEKSNTVSDRALSYKNPYKRVYPASITKLMTALVCVETVEDLEQEFVISSASS IKVSGSSTAFLQVGESLKIKDLLYGMLLPSGNDAAVAVAEASCGSVDAFVEKMNEEAVKI GALSSHFTNPHGLPDENHYTSPYDIYLIFRAAMQHEVLREILGTKEYQVVYKDRNGARKT QVWKATNLYSTGEKELPEGLKIMGAKTGTTKEAGYCLALNTEKTGSDLDYFSIVMKADTK DILYENMTILLDKIS >gi|333758476|gb|AFIH01000001.1| GENE 1467 1449119 - 1449511 457 130 aa, chain - ## HITS:1 COG:BS_ypjF KEGG:ns NR:ns ## COG: BS_ypjF COG1803 # Protein_GI_number: 16079305 # Func_class: G Carbohydrate transport and metabolism # Function: Methylglyoxal synthase # Organism: Bacillus subtilis # 1 129 1 129 137 131 48.0 3e-31 MKVGLLAHDSKKKLMQNFCIAYRGILTRHDLYATGTTGSLIQEVTNLKIHKFLPGETGGV RQLASQIEQGNLDMIIFLRDPSPEADGETELTEVIRLCDMYNIPIGTNLATAELLIHALE RGELEWRNIG >gi|333758476|gb|AFIH01000001.1| GENE 1468 1449524 - 1450657 677 377 aa, chain - ## HITS:1 COG:BH3275 KEGG:ns NR:ns ## COG: BH3275 COG0772 # Protein_GI_number: 15615837 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Bacillus halodurans # 7 376 8 388 398 149 32.0 9e-36 MKLDYDFKQYDFRLLFLMICLNTAGVFIVRSAISAESFKDTLVVRQIMGSFVGLSMSIGI SLFDYRKLCKYSPYLYAASILLLAGVRIYGTASGHGAMRWITVPVLGKIQPAEFVKVALI LFFADYLQRVKEDINTPHGLLMEALYLLLPVGLVLIQPNLSTAIIMTVTVFAMTFASPLK LRYILAFVGIALIALALLFYLFSSGLYDKIPILQGYQVRRILTFLHPDENSNDFAQQMYS IMAIGSGMFKGKGLFNHSIFSVKNGNFLVEEDNDFIFAVIGEELGFRGSIIIIIFFLLII LECLIIAYKAKTLSGRLISVGVMAWIGFQTYTNIAVATGLFPNTGITLPFFSRGVSSLLS VYFGLGIVLNVALQRKT >gi|333758476|gb|AFIH01000001.1| GENE 1469 1450670 - 1453540 2243 956 aa, chain - ## HITS:1 COG:RC0852 KEGG:ns NR:ns ## COG: RC0852 COG0768 # Protein_GI_number: 15892775 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Rickettsia conorii # 606 923 253 578 593 131 30.0 6e-30 MIKEIYSLIKELFSRLFSSRLFALALIFTGLFSVLGIHLFQMQIMQGRSYLESHLKSTRK NLVLPGTRGNIYDKDGKLLAYNELQYNITIADTGAFNSTPKGINNRNRMLHKLAIIIEKY QYPILSQFKVILNEDGSFSYATSSDQDRLRLLANVFRKDPDKLSEKERNSTAEECFEQAK KLYHFNKLTDENGNPISLSDRTALDMIGIIYTLRLTSYQRYMSTNIVENISRECMAEILE SKYDLPGVDVENVSVRKYNYAPYLSHIVGYTGQVQEGQLSDLKKIDDSYEVNDIVGVWGL EKSEDLILKGKKGYKEMYLNNVGSIMEVISEEKPMAGNDIYTTISANDQISIYHLLEQEL AGILSSKLTENNDLDQSKIKQSQLMIPVKDAYYQLINNNVLNKDHFFTEEAGEAEKEIAS RFKQNKEEMLSQIETILNEENGGELSGLPQELQAYMVYIYDYLLSKKGEIVDPEDTRYKS SSAYTQWKNDAISLHDFLMKGIEEGWIDTRKLSLNTEYSDTNEIYALFVQKIMEYLRSDA GFDKLLYKYAIAKQTISGNLLLRALFEQNVLTQDDASYQALAAGDAHTAFTFLLDKIRKI ELTPAQLALDPCNGSVVVTDVKTGKIRALVTYPGFDNNRISDAAYLKKCNEDLSLPLLNG ATQTQLAPGSSFKPISSIASLEEGVINTDTIIDCTGKYEEVTPNIRCWIWPSQHGNENLV DGIKNSCNYFFADLGHRLATDSKGNYNSELGMERIRKYASDFGLNEKSGVELDEAEPRIS TYDPERSAMGQANHAFNAAQLARYITAVANSGSLYKLSIVDKIKDPRNNAVEERSPELEK TLSYSDVTWNAVHEGLRKVITEGVAKSVFIGQNIAVAGKTGTAQEREDRGNHAVFVSYAP YDNPEISVTVNIPYGYSSGNAASLANMVYDYCFGKLSMDTILSRDASNINSLTVSD >gi|333758476|gb|AFIH01000001.1| GENE 1470 1453537 - 1454070 400 177 aa, chain - ## HITS:1 COG:no KEGG:Closa_2043 NR:ns ## KEGG: Closa_2043 # Name: not_defined # Def: rod shape-determining protein MreD # Organism: C.saccharolyticum # Pathway: not_defined # 8 174 26 192 202 164 56.0 1e-39 MGNKFVRRKKKHHTQFLFYFVLLILAFLLQTSVFPLLPFLSASPNLLLILCFSFGFYYGS LPGMLYGLAAGLLMDLFYSGPFGFYSLIFVFIGYVNGYFHAFYYEEYIQLPLFLCVLSGL AYHSYIYLLRFLIRGKWNLPYYAVHIVLPSIVFSFLLTLIMYRFFFSASKQLEEKAL >gi|333758476|gb|AFIH01000001.1| GENE 1471 1454060 - 1454920 917 286 aa, chain - ## HITS:1 COG:CAC1243 KEGG:ns NR:ns ## COG: CAC1243 COG1792 # Protein_GI_number: 15894526 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell shape-determining protein # Organism: Clostridium acetobutylicum # 9 272 10 276 283 92 26.0 1e-18 MENRRSRYIFIFLTVLCIMMVVLSSIKDGLMNPLRNAVGTILVPMQSGVNRVGRGMYLQW EKHKSLVEAEAENQKLQAKIDTLTEENNILKQNEEELQRLRELYSLDQEYLQYKKVAARV IAKDSENWFQVFRIDKGSKDGIKVDQNVMAKGGLVGIVTDVGLNYATVRSIIDDESRVSC MGIQSSDTCIVAGDLRLYEEGRLRITNMKKDAVIQDGDRIVTSNISSKFLPGILVGFAID IEVDEKRLMKNGYLIPAADFTNLQEVLVLTDRKDDRFQKESSNVGE >gi|333758476|gb|AFIH01000001.1| GENE 1472 1454920 - 1455609 486 229 aa, chain - ## HITS:1 COG:BH3032 KEGG:ns NR:ns ## COG: BH3032 COG2003 # Protein_GI_number: 15615594 # Func_class: L Replication, recombination and repair # Function: DNA repair proteins # Organism: Bacillus halodurans # 13 227 17 227 232 160 41.0 1e-39 MKEEWKNYQDLLPREKASQRGFSALSDTELLALILRTGRKDASVLELSEEILHLRECCKG LTGLMHFSLQELKQIQGIGTTKAVELLAIGEIARRIWNSRIRDKVQCFRSPHEVLLYFKE EMRYLDHEEVRVLYLDTKAKLIKEHFLAKGSGNSASISGRELFREALMVAANCIILVHNH PSGDPEPSKEDETFTDSVRRIGEYMGIPLVDHIIIGDNRYYSFKEQGKF >gi|333758476|gb|AFIH01000001.1| GENE 1473 1455746 - 1457026 1200 426 aa, chain - ## HITS:1 COG:BS_ynbB KEGG:ns NR:ns ## COG: BS_ynbB COG4100 # Protein_GI_number: 16078807 # Func_class: P Inorganic ion transport and metabolism # Function: Cystathionine beta-lyase family protein involved in aluminum resistance # Organism: Bacillus subtilis # 32 424 27 421 421 421 52.0 1e-117 MDYREMYVEMGISKEVIDYSESVVKSLEERFKRIDEIAELNQLKVLAALQKAGISEAHLT GTNGYGHNDAGRDALEEAYAAYFHTEDALVRGQIICGTHALAIALQANLRPGEEMLSPVG KPYDTLEEIIGIRESLGSLKEFGIRYRQVDLLPDGGFDWEGIKNAINEKTRLVEIQRSKG YSDRKSFSPEEIGEIIRFVKSIKPDLICMVDNCYGEFVCAEEPSDFGADMVVGSLIKNPG GGLAPIGGYIAGTKACIERCAVRLYAPGLGKEQGPSLNLNKDLIEGFFLAPTVTASAEKS AILAASLFEKVGFSCHPAADTKRMDIIQAITLGSKEALLAFCEGIQAAAPVDAFVRPEAD DMPGYEDQVVMAAGAFVQGSSIELSADAPIRPPFTVYFQGGLTFPHGKYGVIKALDTMYK KGFIKL >gi|333758476|gb|AFIH01000001.1| GENE 1474 1456975 - 1457949 711 324 aa, chain - ## HITS:1 COG:lin1332 KEGG:ns NR:ns ## COG: lin1332 COG0324 # Protein_GI_number: 16800400 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA delta(2)-isopentenylpyrophosphate transferase # Organism: Listeria innocua # 9 297 5 285 305 251 45.0 1e-66 MNRYQQDKPLLILAGPTAVGKSDISVKVAKALGGECVSADSIQVYKGLTIGSGKITEEEM EGVPHHLLDILDPKEDYDASAFQRMAREKVEEIYQRERLPILVGGTGFYIQAMLRDIDFQ EEDEEEKERLRSKLEKEMEERGSIALHEELKWVDPVSAEEIHPHNRQRIMRALEYFYLHK SPISKHNQEEKEKEALYDSLFLVLNRNREDLYEGINARVEKMFQDGLVSEVEAFYKKGYT EHSPGFKGIGYRELFPYLRGECSLSECKSLIQQNSRHYAKRQLTWFKREKNTIFVEAENF QSREEEAEWIIEKCMSKWGFLKRS >gi|333758476|gb|AFIH01000001.1| GENE 1475 1458018 - 1460132 1697 704 aa, chain - ## HITS:1 COG:CAC1836 KEGG:ns NR:ns ## COG: CAC1836 COG0323 # Protein_GI_number: 15895111 # Func_class: L Replication, recombination and repair # Function: DNA mismatch repair enzyme (predicted ATPase) # Organism: Clostridium acetobutylicum # 1 703 1 621 622 361 35.0 3e-99 MKIHVLGTDTVNQIAAGEVIERPSSMVKELVENAVDAHATQITVEIRGGGIEYLRVTDNG EGIGEDDIVNAFLPHATSKIRNLSDLDSILSFGFRGEALSSIAAVSDVELITKTKEDFFA HRIQIHGGEMGEVEEVAGVDGSSFIIRNLFFNVPARKKFLYSESTESNRVEDMVEKLALA NHRVSFHFIRDGKTRFQSIGSPRIEDVVYSIYGKEQSKESLPLEGAYYPSKITGMPTVHI RGILGRPSITRANRQYELFFVNGRFVHDGLLSRALEDAYKPFLMQHKFPFAILFLDLTPN LVDVNVHPQKLEVRFQNRDSIYQAVFNSVNKTLSEANLIDENPLSVFLKEEKKKAEFQPE LLLRKESEERAQGLTKDRVQGLVKDRASEVPKDITYPETVFRQKEEKQEAGVLEKPVQPV RYEEFDLTKGLNSIQEGSYSQEKNSFASEKTFTLKEDVVSSQSFGVDKVFDTAFQEKKKD NTPSPEREHLRNEAKETKEGQESLFTAPFLSEEARISHRIIGEVFQTYWLIEYGNSLYIM DQHAAHEKINFERMMRRKKEKDVFSQNIIPLSIHLSTGEREVLEEYKKEFLEMGYLWEEE SNGISLTAIPVDFPTVRQEEVLLEILDGLMEDSAILEGESIYNKIASMSCKAAVKGNQKI SVAECDTILQELLQLENPFACPHGRPTIVAFKKQDLEKMFKRIV >gi|333758476|gb|AFIH01000001.1| GENE 1476 1460129 - 1462852 2413 907 aa, chain - ## HITS:1 COG:CAC1837 KEGG:ns NR:ns ## COG: CAC1837 COG0249 # Protein_GI_number: 15895112 # Func_class: L Replication, recombination and repair # Function: Mismatch repair ATPase (MutS family) # Organism: Clostridium acetobutylicum # 6 798 3 794 869 787 52.0 0 MDESKLSPMMRQYLDSKKEYPDALLFYRIGDFYEMFFDDALTASKELDLVLTGKDCGLEE RAPMCGVPYHAADSYVSKLVSKGYKVAIGEQVEDPKKAKGLVKREIIKVITPGTQTEETA LEEGKNNFLMSIYLGEKKRGIVTVDITTGECYATAVDSSKECLDEISRFSPKEILMNPSL KEEEELFSQINSRFSISLTEKEERFFSLTEADKLITAHFQSSIMGLGLSDQADLRRALGG CLSYLYDTQKNLLTHIRKIEYFQNKDYMIVDSYSQRNLELWETLREKKKRGTLLWVLDYT KTAMGSRMLRHFLERPLRDKKKIEARLDAVEEFNGHYIDMEELREYLDSIYDIERLLSRI SLSTANARDLLALKLSLQYLPDIKKALLPFQSSLLSKMREELDCLEDIYRKIEEEIVEEP PLSVKEGGLIKASFSKDVEDYRNAGVNGKEWLQELEAREREKTGIKNLKIKYNRIFGYCF EVSKAYQGEIPDYFIRRQTLAQGERYITTELEELQNRILGAEEKLKDLEYALFCTLREEI AAELPRIQKTARELAHLDAYLSLAKLAIKENYVRPRLSEGGSLFIKEGRHPVVEKLLEEE HFIPNDTSLEENQEIAIITGPNMAGKSTYMRQVALIVLLSAIGSFVPAKEAELPICDRIF TRVGASDDLAQGQSTFMVEMSEVANILRNATKQSLLILDEIGRGTSTFDGLSIAWAVVEY IARHIQAKTLFATHYHELTELEGKLNNVKNYCIAVSKKDGEISFLRKIIPGGADESYGID VAKLAGVPEGVLSRAREISAFLSDNDFMQENKNIVAKEGGLETDDNSGGYGKQAENGAFE NGESKNGESKRGTSGAKLLKSLNKLEDRAALTEGEEEVLRKLRSIIPEKISPFEACSLLF ELKELLQ >gi|333758476|gb|AFIH01000001.1| GENE 1477 1462985 - 1464415 690 476 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|16079597|ref|NP_390421.1| hypothetical protein BSU25430 [Bacillus subtilis subsp. subtilis str. 168] # 49 476 9 436 451 270 35 2e-70 MKYMVFEEIERNAPKEEPARQLYFIEALRSFVEMKKGEGYEAKAMVSVIGCQMSAKDGEK LQGILEEAGYQSTESEEEADVILFTTCTVRENANQKLYGRIGQLKHLYKNNKDMVIGITG CMMQEKDEVETIQKKYPYVHLIFGTHNIYKLAELLLEALISKERKVETWEDTSLIVENLP SKRKYPFRASVNISFGCNNFCTYCIVPYVRGREKSRDSREIVKECEALVRDGVKEIMLLG QNVNSYGLDREEELSFPELLREVAKIPGLRRIRFMTPNPKDFSEELLSVIQENENICNHI HLPLQSGSTNILKRMNRHYTKESYLSLLRKIKERLPELGLTTDIIVGFPGETEEDFQDTL DVVREAKFDSAFTFQYSKRSGTPAAKWDAVDEKIVAERFQRLLDTVRESSKEREGKDLGK VMEVLVEERNTETNMLTGRLENNILVHFEGGERLLGEIVPVKLEKSMGFYYYGSVV >gi|333758476|gb|AFIH01000001.1| GENE 1478 1464759 - 1466345 1184 528 aa, chain - ## HITS:1 COG:L195271 KEGG:ns NR:ns ## COG: L195271 COG2509 # Protein_GI_number: 15673161 # Func_class: R General function prediction only # Function: Uncharacterized FAD-dependent dehydrogenases # Organism: Lactococcus lactis # 9 526 17 530 535 374 42.0 1e-103 MELFHKEEEIKKAAAELLHMDCSVISDFLIERRSIDARRKPKLYFVYSVYLSLKGVNEEK LVKKLRSKDIVLTAPVRYKAPELPLEIEGIAREEYFQKEENRPVIVGFGPAGMFAGLLLA RAGLRPIIYERGQAVEKRQEAVTRLWTEGKLDPNSNPQFGEGGAGTFSDGKLNTLVKDSC GRSRFVLETFVHYGAKEEILYDSKPHVGTDALISIVASLRKEIESLGGEVRFESQYHFEK HEKRPLIIAIGHSARDSFCELHTLGYPMVAKDFAMGFRVQHEQKDIDLALYGEIDEKTRA LLGAASYKISHHTKHNRSFYSFCMCPGGYVVNSSSEEGGLCVNGMSYSGRDSGKANSAII FSVSKEEYGGEADPLAGIALQRDFEKKAFRLAGGKVPYSRYDRIKNVASEEGTQTLMLKG QGEECDISPLFRLENYPKLSHLEEDFVESMEAFEKKIKGFSKGNTLVYGVESRTSSPLRI LRGEDYSTMGRRIYPAGEGAGYAGGIMSAAMDGLKVAESLILSYDKQG >gi|333758476|gb|AFIH01000001.1| GENE 1479 1466362 - 1467348 801 328 aa, chain - ## HITS:1 COG:CAC1849 KEGG:ns NR:ns ## COG: CAC1849 COG2081 # Protein_GI_number: 15895124 # Func_class: R General function prediction only # Function: Predicted flavoproteins # Organism: Clostridium acetobutylicum # 73 324 144 392 393 161 37.0 2e-39 MCSTEVKAIRNSGKKENPLFEVSCCIAEELKKEKDLKPGKAFGKEKFLKEEKASKAEKDV KQERIFKIQAKRLLLCTGGLAMPSSGSTGEGYRFAEALGHTVLSPFPSLCPIYTEEKFVK AWAGVRVDTELSLFEGEKLLFKDRGELQCTEYGISGIVVFQCSRLVHELLEKNGKAMLSL SFFPEFKEEEFLRFLLKRKEERSAQYGRDFLLALLPDKLVSVLFQKAQLPVDKTLSEISK EKIGELCRLLFHFPFKASKIADFTKAQCTAGGISVSEVHPDTMESKLCPKLYFAGEILDV DGLCGGYNLHFAFGSGILSGRAMGRRND >gi|333758476|gb|AFIH01000001.1| GENE 1480 1467381 - 1467725 278 114 aa, chain - ## HITS:1 COG:CAC3590 KEGG:ns NR:ns ## COG: CAC3590 COG2081 # Protein_GI_number: 15896824 # Func_class: R General function prediction only # Function: Predicted flavoproteins # Organism: Clostridium acetobutylicum # 7 112 4 109 405 93 43.0 8e-20 MEMQDCVIIGGGAAGMAAAIAAKRSGAQSVLLIEKNDCLGKKLKQTGNGRCNFTNRNMQA SCFRSESPTFIEAFLKQFSYEDSLRFFHSVGVLEKLRGDYVYPHSDQAKSLVFL >gi|333758476|gb|AFIH01000001.1| GENE 1481 1467768 - 1469453 1725 561 aa, chain - ## HITS:1 COG:CAC1016 KEGG:ns NR:ns ## COG: CAC1016 COG2244 # Protein_GI_number: 15894303 # Func_class: R General function prediction only # Function: Membrane protein involved in the export of O-antigen and teichoic acid # Organism: Clostridium acetobutylicum # 28 559 11 527 539 201 28.0 3e-51 MSKGRVSSKATVSSKATGHRNNFVLQGSLLAVAGILVRIIGMVYRIPLTAIISDEGNGYY TSAFSIYTLLLILSSYSMPTAISKLISQNLAKKQYRNTERVLRVSFLYSSLMGAVMASVL FFGADGIAELLKKPYAAFALRALAPTVWIMAYLGLLRGYFQGMGNMIPTAISQILEQIAN AIVSVLMAYVLFAKGQQADLLYKNTEFSYAYGAMGGAIGTGAGAGLALLFMFLLYRYQSP ALRRKAKRDEGLTESYERSALLLLFTMLPILFSSTVYNISSVLDDFLYSSIMTSLGSKTK QIVMEWGIFGEYHVLFNIPVALANALSSSLIPALTMAVASHDRKKTLTQIRVSIRFTLLI AVPCSIGMAVLADPLSRMLFPGKNVHLLIQLTRVGSFAILLYSLSTITNAILQGLGHLNL PLYHSMVALVLHLVSLVLFLYAGLGIYGVVLSNIVFALIMCFLNQRAIFRHTRFRIDLFR SLVMPMLSGLIMGGAAYVIYFVIHIVLPEGLRKGRVGSALSLLPAVFIAILIYFFLLLKS HTLTREDLDEMPMGGRLKRFL >gi|333758476|gb|AFIH01000001.1| GENE 1482 1469450 - 1469947 564 165 aa, chain - ## HITS:1 COG:CAC1293 KEGG:ns NR:ns ## COG: CAC1293 COG0319 # Protein_GI_number: 15894575 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Clostridium acetobutylicum # 22 160 22 161 166 98 43.0 5e-21 MQIDIEWEVGKETSVPYEKIAREIVEEAADFVGCPYDISVSVLFIEDEEMHRINLENRGI DKSTDVLSFPMFELESPGAFTEELEEDPGNFDPDSGELLLGDIILNWDRVLSQAEEYGHS VERELAFLIAHSMLHLFSFDHMEEEERKEMEEKQEAILQNRGYLR >gi|333758476|gb|AFIH01000001.1| GENE 1483 1469895 - 1470920 1002 341 aa, chain - ## HITS:1 COG:MT2437 KEGG:ns NR:ns ## COG: MT2437 COG1702 # Protein_GI_number: 15841880 # Func_class: T Signal transduction mechanisms # Function: Phosphate starvation-inducible protein PhoH, predicted ATPase # Organism: Mycobacterium tuberculosis CDC1551 # 8 318 25 333 352 307 51.0 2e-83 MAEKELILDIPLEHEMNILGDMDKYLRKLQRQFSVNIIDRDGLLKIIGEEENAEKTKEVL LSLLKLSEKGNRISEQNVDYAISLTIKEGKAEQLLQLEEDFVARTALGKPVKPKTLGQKS YVDKIRKNMITFGVGPAGTGKTYLAMAMAITAFREEEVSRIILTRPAIEAGEKLGFLPGD LQSKVDPYLRPLYDALYNIMGPEQYLANAEKGLIEVAPLAYMRGRTLDNAYIILDEAQNT TPAQMKMFLTRIGFGSKVIVTGDLTQKDLEEGKRSGLEDAMFILKNVEGIAFSELTSEDV VRHPLVQRIVNAYEKDEERKKRENHANRHRVGSRERNKRSV >gi|333758476|gb|AFIH01000001.1| GENE 1484 1471010 - 1471216 286 68 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227872333|ref|ZP_03990687.1| ribosomal protein S21 [Oribacterium sinus F0268] # 11 68 1 58 58 114 98 1e-23 MCPKGGLGVRMSSVIVKENESLDSALRRFKRNCAKAGIQQEIRKREHYEKPSVRRKKKSE AARKRKFN >gi|333758476|gb|AFIH01000001.1| GENE 1485 1471251 - 1471751 452 166 aa, chain - ## HITS:1 COG:no KEGG:TDE2418 NR:ns ## KEGG: TDE2418 # Name: not_defined # Def: hypothetical protein # Organism: T.denticola # Pathway: not_defined # 1 165 1 165 167 123 41.0 3e-27 MKNYCNEHQKMPLYGIGPFLILAVALLSLLGIILSFTVLSGGTVNGSGKLLFYFVAFLLI SSGLLIWFFGAVHSDVDRYIQENRLKTDGIYAWTRNPMYTGWWFVLIGILLLFHNLWTLP LIPIQWILLTVVLKRTEEQWLRELFGEEYENYCKKVNRLLPCKKII >gi|333758476|gb|AFIH01000001.1| GENE 1486 1471837 - 1472751 153 304 aa, chain - ## HITS:1 COG:no KEGG:Swol_1745 NR:ns ## KEGG: Swol_1745 # Name: not_defined # Def: transposase # Organism: S.wolfei # Pathway: not_defined # 1 298 1 299 570 335 55.0 1e-90 MRLRATKSAHSVSYSVIKSAYINKKRTTVTVEKLGNEKEICKKHGVSDALAWAREYVANL NKNAEMNKPIEISFDPSIHLTQNDQRLFNGGYLFLQDIYCQLGFDKICKAIVRKHGFKYN LNSILSRLLYARILYPSSKLSSFALSSRFIEKPDFSLEDIYRSLSIINEESDYIQSTLYR NSLKISKRITGVIYYDCTNYFFELKQADGLKQYWAYKENRPLPIVQMGLFMDSDGIPLAF SVNPGNTNEQTTMVPLEKKLVEDFSLTRLVVCTDAGLSALFNRRYNSKGNRGFITTQSRM SCVF >gi|333758476|gb|AFIH01000001.1| GENE 1487 1473061 - 1473783 469 240 aa, chain + ## HITS:1 COG:BH3727 KEGG:ns NR:ns ## COG: BH3727 COG1609 # Protein_GI_number: 15616289 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus halodurans # 24 223 4 204 331 109 33.0 5e-24 MLYEALYTSGMDEFIKGKHNFVNIRQGAKLAGVSTATVSRVMNHPEKCRVETVEKFKSII DEYNYVPNENVQSLIGGVSNTLAIFIQSIDNPFYSKLITAIDEQCLKNRYTLMICNTQND IEKEKTYRDFCLAKRCKGIIVTEGISNNLFENMDIPLVWADRYDAQKSPFVTSTNYESSI EVVRYLYNLGHRKIAYVRNSLDLQSIEKRFKGYKDGLEQVGVSYDPQCIYNKKGELAPSL >gi|333758476|gb|AFIH01000001.1| GENE 1488 1473811 - 1474005 76 64 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTDCPTAIYCANDMVALGVINEARRLGIQVPKELSVCGFDYGVKYFKKKTNHKKRILQYC GIFF >gi|333758476|gb|AFIH01000001.1| GENE 1489 1474064 - 1474261 113 65 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MALPCITWMDTTKEIPIIFPLSSQGRLNRSTAFIYPAVERFLSTRFVLLAFVYYSIFQSE FFPKE >gi|333758476|gb|AFIH01000001.1| GENE 1490 1474185 - 1474592 197 135 aa, chain - ## HITS:1 COG:lin0957 KEGG:ns NR:ns ## COG: lin0957 COG2188 # Protein_GI_number: 16800026 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Listeria innocua # 10 131 116 236 240 63 33.0 1e-10 MSEAIDSPYQKVLNLKDDEKIYRIERIRKGDGNPISLEISYIPYKICPEIYKYLDETSSL YQIYEGIYHLKIGVGRITLEAEKPSKIVQKALDISKSGTVLHMHCLAHLENGTPLYYVDG YYKGDSYYFSAFLTR >gi|333758476|gb|AFIH01000001.1| GENE 1491 1474857 - 1475015 96 52 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGYKLLYSPIQDFIYFHILIYKTRNIFTQLARGPVLNTKEKKSIFIRRYIKH >gi|333758476|gb|AFIH01000001.1| GENE 1492 1475177 - 1476016 531 279 aa, chain - ## HITS:1 COG:no KEGG:BP951000_1876 NR:ns ## KEGG: BP951000_1876 # Name: not_defined # Def: hypothetical protein # Organism: B.pilosicoli # Pathway: not_defined # 1 277 1 277 279 380 68.0 1e-104 MITNDMKRKMEFAKEKVQQAILEGKGHTILSTGITGDDARMAKAAVDAGAKMLEPNHPAL ALARGHKGVTSMHEAEAIRHEISVEQMAEVTRGVRNVVGENIYITVGIPGGFTETMPTPL TDDDFMKMALAGADGLHTHKSSLEDLETIVEKAHHYGLCVDAYIGLPTDRHMFGIPAESP EEVAKTAKKMEQIGVDMIGLMTGMSYEGVEAGQIHPQLKARLEALVQAVSVPTLAEGGIN LDNFQAFKDTGVNILVIGTSIDKMAGKAVSQAVTSFLNA >gi|333758476|gb|AFIH01000001.1| GENE 1493 1476033 - 1477589 940 518 aa, chain - ## HITS:1 COG:no KEGG:Sterm_2791 NR:ns ## KEGG: Sterm_2791 # Name: not_defined # Def: phosphotransferase system component # Organism: S.termitidis # Pathway: not_defined # 1 515 1 518 519 478 54.0 1e-133 MKNLAIIGSSGGNLYNQGGSDPAKMMDEIITQAKAAEIKVSYLQFVGTNASMDGISPDAK ARLWTMEGDNVVSSDEGTLKDINHLATEKDDELSKLILDGKIDGIMLLSCDPTGINNKAL VAAAEKHIPVAGTGGTSMANTQSLGCNVIAASGTTGTTNKTRAISAITAFSKEWGIKYRP ILGRSNTPNMQEGNVWKRVNFRGIMMASMPGFISMALCLALSKIPGLGNLESVFETLVGY LPIVLAAIAARQVSGLDEVGIVAGIIAGALAVDGGIIGGLIVGILAGVLAYYLILVCFKY NVPGTTANITAGGLSGLIAGLVGMMLIAPITAWAGNAIKLAIDWALDYNPVLAGGLAGFA IWFAILGGVYHAAILPIILLEMESTGFSFLGAIDLCGLIMVTAGLNLANIVFPKQKSDRI ACIPNLIINLAFGTFAEASYPFMFADKKVFGAVICSATLSGILIGFLNVKCTAYVPFFVA PLMSNGAIKAIICILFSMAITFILVSICNKSSKNNQRV >gi|333758476|gb|AFIH01000001.1| GENE 1494 1477977 - 1478309 219 110 aa, chain + ## HITS:1 COG:no KEGG:Spico_1256 NR:ns ## KEGG: Spico_1256 # Name: not_defined # Def: inner-membrane translocator # Organism: S.coccoides # Pathway: not_defined # 21 108 241 334 351 73 46.0 2e-12 MTTLVFIICAAITAFVLNHTATGSQIYMIGSNKTAAKYAAILICVLAGINPNGGKGKVGG MVLAVIILQVLSSDLSMFHNISDYYKNLIWGLVLIFVMIINVLTERKSRV >gi|333758476|gb|AFIH01000001.1| GENE 1495 1478283 - 1478453 110 56 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVYVIRSFWGEGKNREKYVHTFHDIPNLYRRRKYSRLFTVYILNILFDLDSTFSFS >gi|333758476|gb|AFIH01000001.1| GENE 1496 1478541 - 1479740 822 399 aa, chain - ## HITS:1 COG:HI1038 KEGG:ns NR:ns ## COG: HI1038 COG1373 # Protein_GI_number: 16272972 # Func_class: R General function prediction only # Function: Predicted ATPase (AAA+ superfamily) # Organism: Haemophilus influenzae # 3 395 5 399 400 243 37.0 4e-64 MKLIERTSYLEKLIKVYGTPDIKVITGVRRSGKSKLMESFHHYIQKNHPEANIIHINLIL TEYETLLEYHALNNYVKDHYVPEKENILLIDEVQMCRGFEKAIISFHSEEKYDIYITGSN AFLLSSDLATLFTGRTFRIEVYPFSFKEFCTYYEITDKQQALNQYIVEGGMAGSYVYKDE NLKLNYLKDVYNTLILRDIVQKFKIRKTILIERVSDFLMDNISNISSARSISTAVSKSDI SSSNATIGSYMKYLCNAYAFYKVRKYDIRGKKYLSSYDKYYLSDHSFRYAFLGKRNMDYG RTLENIVAIELLRSGYDIYAGALYKKEIDFVVMKRSEKIYIQVSDNIAENKTLDRELAPL KAIKDAYPKVVLARTGNPQYDIEGIQVIDIAEWLLMKKD >gi|333758476|gb|AFIH01000001.1| GENE 1497 1479727 - 1479918 121 63 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFNSLKILIFPIFPLQIIGHASSTEAMSNILAASLLNKNEKYLFLFNRLAILSFSEVKIY EAY >gi|333758476|gb|AFIH01000001.1| GENE 1498 1480066 - 1480317 159 83 aa, chain - ## HITS:1 COG:no KEGG:Swol_1745 NR:ns ## KEGG: Swol_1745 # Name: not_defined # Def: transposase # Organism: S.wolfei # Pathway: not_defined # 3 82 490 569 570 98 50.0 7e-20 MLCFLSLILYRYLDKQLGSKYSCEKLLRGLKDMNFLKIEGRGFIPTYAKTEFTDNLEKAF GINTSMQIVTIEKMRNICHQTKE >gi|333758476|gb|AFIH01000001.1| GENE 1499 1480990 - 1481469 -67 159 aa, chain - ## HITS:1 COG:no KEGG:Tthe_2726 NR:ns ## KEGG: Tthe_2726 # Name: not_defined # Def: transposase # Organism: T.thermosaccharolyticum # Pathway: not_defined # 1 129 103 231 570 181 64.0 7e-45 MGFDKICKAIARKHGFKYNLNSILSRLLYTRILYPSSKLSSFALSSRFIEKPDFSLEDIY RSLSIINEESDYIQSTLYRNSLKISKRKTGVIYYDCTNYFFELEQADGLKQYGASKENRP LPIVQMGFLWTVMVFLLPSVSIPEIPMNKQQWFLWKKAC >gi|333758476|gb|AFIH01000001.1| GENE 1500 1481514 - 1481798 372 94 aa, chain + ## HITS:1 COG:DRA0143 KEGG:ns NR:ns ## COG: DRA0143 COG1250 # Protein_GI_number: 15807812 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyacyl-CoA dehydrogenase # Organism: Deinococcus radiodurans # 1 93 245 335 347 84 44.0 5e-17 MLIPFLSAGEMLLAKEVADPATIDLTWRLGTGSPLGPFQILDIVGLNTALNIVFNNLQSQ DPSSIPGTIKAILEKYVAEGKIGVNAGEGFYKYK >gi|333758476|gb|AFIH01000001.1| GENE 1501 1481800 - 1481946 100 48 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLVSAFMQYRLKSGYSDLVGKVNKSMPKFQLYTVVKAFLDFVFYFNKM >gi|333758476|gb|AFIH01000001.1| GENE 1502 1482026 - 1483321 647 431 aa, chain - ## HITS:1 COG:YPO1668 KEGG:ns NR:ns ## COG: YPO1668 COG0477 # Protein_GI_number: 16121932 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Yersinia pestis # 17 412 7 407 411 123 23.0 9e-28 MIGLKLQGKLKKNFSLICLVALAGSVIFALPLLRLEYYGSYMKEYHLTNTEMGILASVLG VFGVVSYLFGGVVADGISLRKIVVCSLLGTGAGGLLHLLPLSFKGLLLVYALWGISTTFA FWPASVKLVRLASDQEDEGKAYGYFEGGQNIGAGLAAALALILFRLASARVSNPFFAMKV VILFYSFLNFAFALLTFFFLEKEEKLDSKNPSFKGLFQILKRKEIWIISLVALCNHIFCI GIAYYIPFSTDVLGAGIAFGAALGVARKFSSFLGNVSGGYIRDKIGTTNMMILAFSGMIV LQIMLFLYPKTPAFLVLTALSFVFVLFVFHMNYAMAWTMMSEGVIPVEYTGTAAGIICMF GAIPESFVSLLAGNLLDQYRVHTGYAIFFLILMAVSTFGLILVILWKELLKSNQHRENLD EKALEELKQYV >gi|333758476|gb|AFIH01000001.1| GENE 1503 1483348 - 1483776 262 142 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|331084809|ref|ZP_08333897.1| ## NR: gi|331084809|ref|ZP_08333897.1| hypothetical protein HMPREF0987_00200 [Lachnospiraceae bacterium 9_1_43BFAA] hypothetical protein HMPREF0987_00200 [Lachnospiraceae bacterium 9_1_43BFAA] # 53 141 33 124 127 88 47.0 2e-16 MGKNKVLVPILGLVLLMVVFLGLAFQMAKIEDNRGKASLESSENQSATVKAEDNTKESKL DPKEESEKNQSESKQKTEAEALIGEKITQDEIQNKVGKWNDFEMSSESCERGVYAGKFFY NSFIIHTRTYDQGQTFNVVSVN >gi|333758476|gb|AFIH01000001.1| GENE 1504 1483825 - 1485477 1331 550 aa, chain - ## HITS:1 COG:ynjE KEGG:ns NR:ns ## COG: ynjE COG2897 # Protein_GI_number: 16129711 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Escherichia coli K12 # 90 507 43 423 440 112 26.0 2e-24 MRRAILTGVTLLLTGASLLSACGNTGSKSQESTVKESATEKKESENTTESETEAEKAEKK TDNSLLPKELKDFPEASEEEVKNYMSDNDENTLLIDSRGEEYYSGWAEEGKTKGGHLSNA LLFSSRWLDCYYTEETPRKMYLDRAMKDQGIDKDRSVIVYDRGGEEAKNVANYLALEGVK NIKIFHADKLLKDSDTISYQGYDHFLPVEIVKSVSDVKTGEAEKLSAAAEAVLGSDPSKI VLIDVAWGNMKESTYLSEGHVPGAIHINTDCYERPRVYVPEKRSDYAKEWRLLSIEEFRD SLCPQYGINKDSIVILTGDTAEAHGRLGFMLRTIGVKTYAMTGKLTAWRYAGYPLDKGED SIVLPSAVDSFGSTDIPNPHEIIWTDEVKKILAGEEEGQIVDNRAEKQWNGEDSGYFYHD LAGRIENTIWCLENDVENGQYFMNADATPRTKEELVIYMKKNGVDPEKPAIFFCGDSWGA AKIAYWCQAVGLDQVKEWGNGWIPWSNLGNEFIDHEGRKVHYDKYLDAVLDENGKDVSDG VNILVSKKKA >gi|333758476|gb|AFIH01000001.1| GENE 1505 1485727 - 1485993 191 88 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKNYCNEHQKMPLYGIGPFLILAVALLSLLGILLSFTVLSGGTVNGPGKLLFYFAAFFLI ISGFLIWCPCMTEAGWIPIRLMSLREYK >gi|333758476|gb|AFIH01000001.1| GENE 1506 1486244 - 1488718 1837 824 aa, chain + ## HITS:1 COG:no KEGG:Olsu_1732 NR:ns ## KEGG: Olsu_1732 # Name: not_defined # Def: polymorphic outer membrane protein # Organism: O.uli # Pathway: not_defined # 49 615 33 613 679 319 40.0 4e-85 MVTDCTQFIKKWVRGEVPAILVFFLAFILSASFLPSDMKFTYAREAGSIYLNGETGNDEN DGMSEGNAVKTFEKAKELAGADLDIETIYINGTVDISGEISLDGTNAILMRNPGFRDHLL RVKQGETATLKDITVDGGGLNDRLTLKSLLLVDGDLNVTDGTILENNIVLDLDHWHVYGG AIYTDRDKEHKRTINMTGGIIRNNSAHQGGGIYLGRNTVLNLSGGAIEDNKAYMDRSKKA LTSAEAGGGICTYMSSTINLSGDAVISGNSATECGGGISLGSYEPYGGLKCILNMTGGVI KENKAGSAGGGIFVQTDNQKRDTDGSNVANISAGEILDNEMTGRGATDKMFGGGGIYVNG LSQSLQAVLNLKNALITDNEAAIAGGGYASCPVSTTNIFEKDGIAIYGNRAKLGQDIDIE SGIFDYGLHGGFPPYTISPVMLGGTPYRWKDNNNNEVPLTSLTGVLDGYISQKMQLHTDV TEDAQAESLATVIIKGNKSSTRGGGIGSNGGLVAGKKEVTNIKVTKLWKYDDAANRPRSI TVELYRKAEEDPDNPTLIGTGIMWEKDGVWELNFENLPKRDENAKLYRYTIKEQSIEGYA VQLSGNQNSGYTLTNIPETTVQVEKKWNGEKANQVEIKLLADGVEKDKAILTEDEQWTHT FSNLPRFAENDGHEIVYTVSEVALSGYTSSISGDAASGFIVTNTKTTTPPGPNPPDPNPY TPPSPVTPGRPVNPVPSTPSTPTSPNPNTPTVAGESRETPDPTEVIENDKIPTVLGESRT PAEENKRNTPTGDTSHLLLWASLLGLSILASVFYGVARTQKKRK >gi|333758476|gb|AFIH01000001.1| GENE 1507 1488845 - 1489444 91 199 aa, chain - ## HITS:1 COG:no KEGG:Ccel_1021 NR:ns ## KEGG: Ccel_1021 # Name: not_defined # Def: hypothetical protein # Organism: C.cellulolyticum # Pathway: not_defined # 18 184 119 273 274 71 28.0 2e-11 MGISKEEVLWFSHIISTSIFKIGVLQYEITKLQYPGKEKGEPYMEVSAKGKALLPEGCDV LSCHIRHGVELSSIAVEASFRKAADFFKEHYPHTNFRAFVCSSWLLYPSMLALLGEESKI RQFALRFTIIAACPDRKQAMERIFSYGSKSLPKEKWTSLQVLAIQNKKRLGYAMGVIMIE PDVQSSPIFPGKNGTLRTL >gi|333758476|gb|AFIH01000001.1| GENE 1508 1489470 - 1489763 102 97 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEELTLSFEEVVRNLHFIPYIEQEILKSFSRKEKWIQEIAETAYSGTDYAFPLLKRRPFT RLLVLCYLLKTKFFDYQKAWRVKGDHLGHVPRCLRPM >gi|333758476|gb|AFIH01000001.1| GENE 1509 1489770 - 1492418 2402 882 aa, chain - ## HITS:1 COG:CAC1678 KEGG:ns NR:ns ## COG: CAC1678 COG0013 # Protein_GI_number: 15894955 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Alanyl-tRNA synthetase # Organism: Clostridium acetobutylicum # 1 877 1 877 881 868 51.0 0 MEKYGVNELRKMFLDYFKEQDHLILKSFSLVPHNDNSLLLINSGMAPLKPYFTGQEIPPK RRVSTCQKCIRTGDIENIGKTARHGTFFEMLGNFSFGDYFKSEALHFAWQFLTERVGIPK DRLYPSIYLDDEEAFRVWTEELGVPADRVYRFGKEDNFWEHGAGPCGPCSEIYYDRGEKY GTGPEDVMGGEGDRFIEVWNVVFSQFNNDGHGHYTDLIQKNIDTGMGLERLAVVCQDVPS LFDVDTNKAMMEEIAELSHKRYLENKEDDVSFRIIADHVKSCTFMASDGIMPSNEGRGYV FRRLLRRAARHGRILGIEGAFLARLSEKAIALSKDGYPELEEKKDMILRVISEEEERFNK TIDNGLAILQSLIQDLQKKKEKTLSGEEAFRLYDTYGFPLDLTKEILEDAGMDLDEEAFH KAMKVQKDTARAARKTTNYMGRDDIYQNLDPSISSEFTGYDRLEEDATVQALVFLSDEEG QGKICEKITEGQKAAIITDKTPFYATMGGQQGDQGEITGENSLFVVDETIHLQGGKIAHL GVMEQGEISVKERVHLSVDEEARNLTARNHTATHLLQKALKTVLGPHVEQAGAYYDDKRL RFDFTHFAALTKEELKKVEEMVNQEIAKGDLVKTEEMSLEDAKKSGAIALFGEKYGDKVR VVSVGDYSVELCGGTHVSQSGSIQGFKIISEQGIAAGIRRIEALTSQNLFDYFQKEEELL KELSAKLKSDPEHLLQRVESLEQELKSSKSDLDKLKAKMAKEEMGELSAETVNGCSVIIK ELQGVDRNGLRTLGDSLKDKYENAFVLLISVEDGKPVLMATASDGAVKKGAHSGNLIKEV AAVLGGGGGGKPQMAQAGGKDVSAIPHALEKAKELMQAQLQG >gi|333758476|gb|AFIH01000001.1| GENE 1510 1492530 - 1492646 118 38 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEDSIVLAREALKKLFLAVFAYRLAVFAYRLSLNLPSK >gi|333758476|gb|AFIH01000001.1| GENE 1511 1492692 - 1493141 300 149 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227872328|ref|ZP_03990683.1| ## NR: gi|227872328|ref|ZP_03990683.1| hypothetical protein HMPREF6123_0622 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_0622 [Oribacterium sinus F0268] # 36 148 72 184 185 130 69.0 4e-29 MQYETKGNPQQVEAQEILPVEEEDIELSEEDSGSFFQNEFSKLEELEKDKNWQRDLPLRR RYEKIASLYDGELQRLVSYYGKQIKGAERDNFFAEQSIFLAERSRESKKELSQDKTGVEE NIDYLKKYIALTKMRCSTILEKISAESDD >gi|333758476|gb|AFIH01000001.1| GENE 1512 1493249 - 1493962 209 237 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 1 227 1 226 305 85 27 1e-14 MGKILEVKNLHVHYGMIHAIKGISFHVNKGEIVTLIGANGAGKTSTLQTVTGLIPSSSGE IIYNEKHIEKVPGHKLVERGLAHVPEGRRVFASLSVYQNLMLGAYTRKDKKEIEDSLEMI YHHFPRLKERRNQVAGTLSGGEQQMLAMGRALMSKPEMILLDEPSMGLSPIYVNEIFSLI QMIHDSGVTVLLVEQNANKALMIADRAYVLETGSIALEGDAKQLLEDPKVKAAYLSE >gi|333758476|gb|AFIH01000001.1| GENE 1513 1493964 - 1494722 221 252 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 15 242 17 226 305 89 25 5e-16 MNLLEVNALGISFGGLKAVDNFHISVKKNELYGLIGPNGAGKTTIFNLLTGVYKPNAGEI LLNGKNLVGMSCIKINHQGVARTFQNIRLFNKLSVLDNVKAGYFASQKYSFLDGIFRLPN YFKKEKTMDDLAMDLLSVFHLEDLAGESAGNLPYGKQRKLEIARALSTNPCLLLLDEPAA GMNPSETEELMETIRLVRDRFDMTVLLIEHDMKLVSGICDRLTVLNFGQVLAEGETAEVL HDEKVIKAYLGE >gi|333758476|gb|AFIH01000001.1| GENE 1514 1494719 - 1495777 934 352 aa, chain - ## HITS:1 COG:FN1430 KEGG:ns NR:ns ## COG: FN1430 COG4177 # Protein_GI_number: 19704762 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport system, permease component # Organism: Fusobacterium nucleatum # 46 328 2 253 285 195 48.0 1e-49 MNKTRLKQSKEIFLNYGILILVYLVVQFFLQTGSVSSLMKGLLVPLCIYSILAISLNLVV GISGELSLGHAGFMCVGAFSSATCSMLLKGSGLPPILLFCIALFVGALSAGVLGILIGIP VLRLKGDYLAIVTLAFGEIIKNLINALYFGVDKAGWHFSLKDSNAISLGEGGSWIIKGAQ GITGTPKYSNFTIGMILLILSMIFIQHFIHSRTGRAVMAIRDNRIAAESIGLPVTKLKLL CFSISAAFAGIAGVLYAHNLSSLQALPKNFGYNQSIMILVFVVLGGIGNMRGSILAAVVL TLLPEMLRSLNDYRMLIYAVVLILMMLFTSAPSFIAFRKNILQKFRKKEVTA >gi|333758476|gb|AFIH01000001.1| GENE 1515 1495779 - 1496663 1085 294 aa, chain - ## HITS:1 COG:FN1431 KEGG:ns NR:ns ## COG: FN1431 COG0559 # Protein_GI_number: 19704763 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid ABC-type transport system, permease components # Organism: Fusobacterium nucleatum # 2 294 14 308 308 258 51.0 9e-69 MMSFISYLLSGISLGSVYAIIALGYTMVYGIAKMLNFAHGDVLMVGSYTAFIAFNQMGLP IPLAVLLSMAVCTALGVLIERIAYKPLRNANALAVLITAIGVSYLLQNLALLLFSANPKS FTSFVKISPIKLSGGNLVISGETVVTIIVGALVAVFLLLFIHKTKAGQAMLAVSEDKGAA SLMGVNVNATIAMTFAIGSALASVAGILLCSAYPSLTPTTGAMPGIKAFVAAVLGGIGSI PGAFIGGILLGILENLSKAYISSKLSDAIVFSVLIVVLLIKPTGILGKKIMEKV >gi|333758476|gb|AFIH01000001.1| GENE 1516 1496834 - 1498024 1521 396 aa, chain - ## HITS:1 COG:FN1432 KEGG:ns NR:ns ## COG: FN1432 COG0683 # Protein_GI_number: 19704764 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport systems, periplasmic component # Organism: Fusobacterium nucleatum # 1 392 1 375 383 244 39.0 2e-64 MKKQISFALATLMALSLVACGGNTKSSNETSGTASEKADASGKVWKIGAQGPLTGGAAVY GNAVVNGAEIAVNEINANGGINGYQIEYKKADDEHDQEKAINAYNSLKDWGMQFLVGPTT SAPAIAVGTESEPDNMFILSPSGSALEVTAPKNVFRVCFSDPAQGAKSAQYIGSHKLGTK IGIIYDSSDVYSTGVHDSFKEEAPKQGLEIVADEQFTADSNKDFSTQLQKMKDSGADLVF LPFYYTEAALVLTQANTMGYKPTFFGCDGMDGILNVENFDTKLAEGLMLLTPFAADAKDD LTVNFVKNYKEKYKDTPIQFAADAYDAVYAIKAAVEKANLTPDQSVSELGDAMEKAMTEI SLDGLTGSGMKWDASGDVDKEPKAVIIKDGAYVSAE >gi|333758476|gb|AFIH01000001.1| GENE 1517 1498204 - 1499205 828 333 aa, chain - ## HITS:1 COG:FN0906 KEGG:ns NR:ns ## COG: FN0906 COG0240 # Protein_GI_number: 19704241 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Fusobacterium nucleatum # 1 327 2 331 335 355 55.0 9e-98 MKITVLGAGSWGTALSMTLWKNGHSVYLWTHDEKEAKYLEENRKCMNLPDVVIPKEIAIL TSLEEAVKEGEVLVYAVPSIFTRSMAERTLPFVRKEQILVTVSKGIEESTLFTMTDILEE FFPENKIAVLSGPSHAEEVSRFIPTTIVCASKEEETARKIQSVFISDTFRVYTNKDVLGV EIGAALKNVIALAAGIADGLGYGDNTMAALITRGIAEIARLGQAMGCHLETFAGLSGIGD LIVTCASKHSRNRRAGILIGKGETYEEAMKEVGQVVEGVYAAKAAKKLGEKYHVDLPIVK EVNAVLFEGKPAKDAVSDLMLRDSRSESPAVGF >gi|333758476|gb|AFIH01000001.1| GENE 1518 1499224 - 1499895 611 223 aa, chain - ## HITS:1 COG:FN0537 KEGG:ns NR:ns ## COG: FN0537 COG0344 # Protein_GI_number: 19703872 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Fusobacterium nucleatum # 10 211 7 192 194 114 38.0 2e-25 MSVQEILLCLVVGYTFGNIPNGYLYAKTQGIDIYKEGSGNPGSTNILRTLGKKAGITVLL MDIAKCMLPIFFMVLFFKPENEDLKSLILMVTGIGAILGHNFPCIPKVKGGKGVACTGAL LIALSPIYTLCLLLFFILVVLITGYVSLGSMLAVTVFFFSVVLFGKTSLLFPFSKAVYLP MCALSFLLMAMLIFQHRGNIKRLLNGTENRFGKKKKEPREKER >gi|333758476|gb|AFIH01000001.1| GENE 1519 1499896 - 1501221 1432 441 aa, chain - ## HITS:1 COG:CAC1711 KEGG:ns NR:ns ## COG: CAC1711 COG1160 # Protein_GI_number: 15894988 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Clostridium acetobutylicum # 1 437 1 436 438 513 58.0 1e-145 MRKAIVAVVGRPNVGKSTLFNTIAGKQISIVQDTPGVTRDRIYAEASWLNYHFTLVDTGG IEPVSDDILLKQMRSQAELAIETADVIIFVTDVRSGVVDADYEVANMLRKSKKPVVLCVN KVDSVKKFGNDIYEFYSLALGEPFAVSSANHMGIGDLLEEVVKHFPKEGEASEEDNRLKI ALIGKPNVGKSSLTNKLLGENRVIVSDIAGTTRDAIDTEIIHNGVPYVFIDTAGLRRKGR VTEEIERYSVIRTVSAVDRADICIVLLDATEGITDGDTRIAGIAHESGKGVILAVNKWDL VEKDDKTMQEFTKKLREKFSYMDYAEILFISAETGQRTQKIFEMVDRIHENQVLRIKTGV LNEIMAKATAMKQPPSDKGKRLKLFYITQASVSPPTFVIFVNDRELMHFSYTRYIENQIR ENFGFRGTPIRFIIRERGEEK >gi|333758476|gb|AFIH01000001.1| GENE 1520 1501471 - 1505007 3327 1178 aa, chain - ## HITS:1 COG:CAC2229_1 KEGG:ns NR:ns ## COG: CAC2229_1 COG0674 # Protein_GI_number: 15895497 # Func_class: C Energy production and conversion # Function: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit # Organism: Clostridium acetobutylicum # 3 411 2 413 413 558 66.0 1e-158 MARKMKTMDGNQAAAHASYAFSEVAAIFPITPSSVMPEHVDEWATEGRQNILGETVQVTE MQSEAGAAGAVHGALAAGALTTTFTASQGLLLMIPDIYKIAGEQLPGVFDVSARAVATHA LSIFGDHSDVMACRQTGAALLCESSVQEVMDLTPVAHLAALKGRLPFINFFDGFRTSHEI QKIEEWDYEDLKDMVDWEYIDAFRKNALNPNHPVERGSAQNPDIFFQAREACNPYYDALP AIVQEYMDKVNKKIGTNYALFNYYGAQDAEHVIVAMGSVNETIEETIDYLAEKTGAKLGL IKVRLYRPFATDAFLKAIPKTVKTISVLDRTKEPGSIGEPLYLDVVAALSDSEFKDVTVL SGRYGLGSKDTTPAQIVAVYNNKDKKRFTIGINDDVTHLSLEVGPSIVTTPAGTVNCKFW GLGADGTVGANKNSIKIIGDNTDKYAQAYFDYDSKKSGGVTMSHLRFGDKPIKSTYLIKR ANFVACHNPSYMTKFNMVQELVDGGTFLLNCTWSKDEVEKHIPGQVKKYMAEHNIKFYVI NGVKIGIETGMGPTRINTILQSAFFTLTGIIPKEQANKLMKDAAEKTYGRKGEDVVKKNW AAIDAGANAFEEVEVKKEWANCADEGLEFKTKTEGRKDILDFVNNVQNYVSAQEGNNLPV SAFTSYVDGSTPIGTAAYEKRGIAVNVPAWNPDNCIQCNFCSYVCPHAAIRAFAYTEDEA AKAPEADQQKAMNGMPNYKFGIKVSVMDCVGCGSCANVCPGMKGEKALVMSPIEDNLDRQ KYFDYAVKLPEKEEVIAKFKETTVKGSQFKKPLFEFSGACPGCGETPYAKLITQLFGERM YISNATGCSSIWGNSSPSTPYTVNAKGQGPAWDNSLFEDNAEFGYGMLLAQNAIRDRLKK QVEKLVEDNKDSAVVEAAKEYLDTFAVGATNGTATEKLVAALAGKTDEVSKDLLKHKDFL GKKSQWIFGGDGWAYDIGFGGLDHVLASGKDINVMVFDTEVYSNTGGQSSKSTPTGAVAQ FAAGGKETKKKDLAGIAMSYGYVYVAHIAMGADMAQTVKAISEAEAYPGPSLIIAYSPCI NHGIKKGMAKAQTEEKLAVEAGYWNNFRFNPLGGDKKFSLDSKEPKFESYQEFLQGEVRY LSLALKNPDRAKALDEMNEKEARERYEKLKRLVDLYNN >gi|333758476|gb|AFIH01000001.1| GENE 1521 1505207 - 1507120 1465 637 aa, chain - ## HITS:1 COG:BS_yoaR KEGG:ns NR:ns ## COG: BS_yoaR COG2720 # Protein_GI_number: 16078932 # Func_class: V Defense mechanisms # Function: Uncharacterized vancomycin resistance protein # Organism: Bacillus subtilis # 355 526 138 303 303 128 42.0 4e-29 MLASQRRLSRGVSRAQGSSRSRSASYSYNDRGVRSGRSSGNGGSGRRPNKKSPFPFVLIG VLAIAVLGTGVYALSRPSSHAEETESAVETQAINPDAIQKDLYLDYSAFKKGAELLNMKG MTKEEVEDFLHKSYQWNIVIKNANPNIQYFSMPEFPEHKENSSSDDGVDDQGTEEIVKIA NSLSDVSIRPEKTEYNVPDLLEDSIHDFVEQIFTAYKESETAVSSTEESSTEKEKKKKKK KEESTTETETQAPTADYVLQLPNFSDKITDYVNQLAIVWKMAPQNGDITKYNKSTGEFEF GGTKDGYAVNVSDTAKKVMDLLDAKEFSGEVETVGSAIPASTDSIKDKYKIIASVTTKTT SNQLRNTNVKLAAEAVNGTVLEPGEEFSFNTIVGQRTAEKGYKPAAAYNQGEVVEEVGGG VCQISSTLYNAVFRAGLTTTYRRAHTFAPTYVTPGTDATVSWPGPDYKFVNNSKHAVGIL AWYKDQTATVQIYGLPVLPEGVKWELVSEKVKDLPVPQPQIITPEQGKESSGSAGSEWQA FKVITKDGKTEKVKDHYASYKGHTPKKYAEGSTESSSAAESQTGSTQASSAQETKSSETK QSESKTAENPVISNGPSGSNTVTTTAEDYISPGPGSD >gi|333758476|gb|AFIH01000001.1| GENE 1522 1507418 - 1509835 2163 805 aa, chain - ## HITS:1 COG:BS_leuS KEGG:ns NR:ns ## COG: BS_leuS COG0495 # Protein_GI_number: 16080084 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Leucyl-tRNA synthetase # Organism: Bacillus subtilis # 4 802 3 802 804 860 53.0 0 MARYNHAQVEKKWQEFWEKNPINPKDDKKEKYYCLDMFPYPSGSGLHVGHWRGYVISDAW SRYQLIKGKYVIHPMGWDAFGLPAENYAIKMGIHPSITTKKNVENIKRQLQQINAIYDWD MELNTTDPDYFKWTQWIFVKMFEKGLAYEKEFPINWCPSCKTGLANEEVVDGKCERCGTA VTKKNLRQWMLKITAYADRLLDDLDTLDWPEKVKKMQAEWIGRSYGAEVDFKLENSEEKI TVFTTRPDTLYGATFLVLAPEHPLVKKITTAEKLPEVEEYIQKAANKSNVDRMAVTDKDK TGVFTGAYVINPMNGKKTPVWISDYVLADHGTGAIMCVPAHDSRDFAFAKKFDLPIVQVI SKDGKEEELTEAYTEASGVMINSGAWNGQESSVLKESAPEDIEKKGLGKKTVSYKLRDWV FSRQRYWGEPIPIVHCPKCGNVAVPVEELPLKLPEVEHYEPSGTGESPLAGIPEWVNCTC PKCGGKAKRETNTMPQWAGSSWYFIRYVDKYNDKELISREKADKYLPVDMYIGGVEHAVL HLLYSRFWTKFLYDIGVVGFKEPFKKLFNQGMILGPDGQKMSKSMGNVVSPDDLVADYGC DALRLYELFVGPPELDAAWDARGIDGVYRFLNRFYSLVLDSKEKNVAETKEMVRLRHNLI HDIEERFESFNLNTVVSGFMEYNNAMLDIAKREGGMDLETLKTFSILLAPFAPHIAEECY HLCGGETSVFSANWPEYSDKERESDEIKVPVQINGKVKTVLEVPKDIDKESILTEAKKAL GDKLSGNLIKEVYVPGKIVNFVVKA >gi|333758476|gb|AFIH01000001.1| GENE 1523 1509964 - 1512021 1043 685 aa, chain - ## HITS:1 COG:PA4807 KEGG:ns NR:ns ## COG: PA4807 COG3276 # Protein_GI_number: 15600001 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Selenocysteine-specific translation elongation factor # Organism: Pseudomonas aeruginosa # 7 677 2 620 641 263 29.0 7e-70 MEERHYVIGTAGHIDHGKTALVKALCGCDTDRLKEEKERGMSIALGFASLLLPSGKKISI IDTPGHEKFIRSMVSGAMGMDLVLLVVSAKEGVMPQTEEHLAILRLLQIKKVVLVLTMVD LVDSSLLLKREEEVRELYKTFFRHEPEPKIFSISSYTGEGISALKTYLSEEAEKIVGKSS KGVFRMPVDRVFSVAGAGTIVTGTALSGKIQKDKHSGKSGVSEEIREAGDSGESGGAAGV YLLYPEEREVKVRNIQVHGEDVNSAFAGERIALNLQGMEKAACKKGDIIAEKGSLQPSFL LDCRIECISPFFEIKHNQHLELMIGTAHIPCKVIFLEGERIKKGESSFVQLQLQEKTVSV FRERFILRNDAEGETLGGGFVLDPCPSGRHRRGRFPLTFLEALENEGEEALLASFLKKRK RNFSSFTELKKRFSGFPKIQEIVEKEKISHLVSSDVDNNTNSVFFTEENGNTFLFTIELN GELFAILSEEEMLMRKELEDYLRDFHKKNPYKLGEKSVVLHSKLFSSYNKNTYKALLKAW EEKGDFRFGEGFIALSDYKPVKDALYTKIANALVNDMQKGKYSFMKLSDHFWLSEEKNRL SDVVASLENKGTLVKLDGEYYTLRKLFENLKNFSLDKMEKEGEITIDALREEFGISRKNA KLFFKATDRMGITKDRGFESARSVP >gi|333758476|gb|AFIH01000001.1| GENE 1524 1512090 - 1512560 553 156 aa, chain - ## HITS:1 COG:no KEGG:CLI_2534 NR:ns ## KEGG: CLI_2534 # Name: prdE # Def: PrdE protein # Organism: C.botulinum_F # Pathway: Arginine and proline metabolism [PATH:cbf00330] # 1 153 1 153 156 208 69.0 7e-53 MGIGPSTKETTLHHFRDPLVDELCDDTDIDFVGVILAGIPQDNASKYFTGDRIGALAEAM RVKGAIVSEDSWGNSNVDFAHAIEEIGKREIAVVGVSFVGVQGAFVVTNRYMDSIVDINK SVEGIETNVVGENNLVRTDAKKAKALLKLKMRKLNR >gi|333758476|gb|AFIH01000001.1| GENE 1525 1512627 - 1513400 714 257 aa, chain - ## HITS:1 COG:no KEGG:CD3240 NR:ns ## KEGG: CD3240 # Name: not_defined # Def: hypothetical protein # Organism: C.difficile # Pathway: Arginine and proline metabolism [PATH:cdf00330] # 1 256 4 254 255 237 47.0 5e-61 MEERILRTLSIKAFHVQAAREENRFALEKEANNQYTLCFDSSVPEKLAEKEPLIHSASLK LISKEERHVPIHSIMDIIPISTKVLGKIGEGITHTLTGIYLVLCGTDTEGNYISAFGNSD GFLDEQIVFDRAGTPGKEDLILLMDICLEARAGYSRSGPDACHRICDSFCQEIRHVLKKL DGRHCTERHDYQDIERPGKEKVVLVKMVSGQGAMYDTHFLSPEPSGYNGSRSIIESTGSP VILSPNEYRDGAIRALY >gi|333758476|gb|AFIH01000001.1| GENE 1526 1513695 - 1513832 189 45 aa, chain - ## HITS:1 COG:no KEGG:CLJ_B2705 NR:ns ## KEGG: CLJ_B2705 # Name: prdB # Def: D-proline reductase, PrdB subunit (EC:1.21.4.1) # Organism: C.botulinum_Ba4 # Pathway: Arginine and proline metabolism [PATH:cbi00330] # 1 45 197 241 241 75 86.0 8e-13 MGANAGEPNNKEMQYHIVKDTLEQLEKIESAGKIVSLPYEYIAKV >gi|333758476|gb|AFIH01000001.1| GENE 1527 1513968 - 1514420 554 150 aa, chain - ## HITS:1 COG:no KEGG:Clos_0030 NR:ns ## KEGG: Clos_0030 # Name: not_defined # Def: D-proline reductase (dithiol) (EC:1.21.4.1) # Organism: A.oremlandii # Pathway: Arginine and proline metabolism [PATH:aoe00330] # 1 150 1 150 241 231 74.0 8e-60 MDFTVVKGMQSEIFVPITPPPVWAPVTKPLKDMVVAIATAAGVHHKDDKRFNLAGDFSFR IIKDTMPSSELMVSHGGYDNSDVNKDINCMFPIDRLHELAKDGVIKAVAPVHIGFMGGGG NQEKFKNETGPAIAKILKDEGVDAVILTAG >gi|333758476|gb|AFIH01000001.1| GENE 1528 1514457 - 1514672 281 71 aa, chain - ## HITS:1 COG:no KEGG:CLM_2775 NR:ns ## KEGG: CLM_2775 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_A2 # Pathway: not_defined # 1 71 12 84 91 99 71.0 4e-20 MEGIIVEVHDGAVGIDLKGRLGFLKIPMRMLISDYEIKVGQEVGFNMSFIEQLGPAVNEK YVSNIQKHKGL >gi|333758476|gb|AFIH01000001.1| GENE 1529 1514702 - 1516621 1871 639 aa, chain - ## HITS:1 COG:no KEGG:CLOST_2234 NR:ns ## KEGG: CLOST_2234 # Name: prdA # Def: D-proline reductase proprotein prda [contains: D-proline reductase subunit beta (d-proline reductase 45 kda subunit); D-proline reductase subunit alpha (d-proline reductase 23 kda subunit)] (EC:1.21.4.1) # Organism: C.sticklandii # Pathway: Arginine and proline metabolism [PATH:cst00330] # 1 636 1 625 629 715 62.0 0 MSISAEYAEEHKKSPAVLCCRAEEGIVLSHHNLEDPEIFDDLVDQGLLKLDGCITIEEAL GAKLVKTCDSLTPLTKDLVQLSEKEREEKIEEKEERREAGDNTGNAVSEEKNGQTFLPVG QNSFFGGCLKIHIGEGKGIDIQIPVGALGISSATSAVQGAFASPIAYPLASDNGKNTEKE KKEEEILVRSLVRKHFKVTEVRRGSETKLEGTILFIREGIEEEAAASQELVEKLELDIIT PEQYHSFSNTIMDVQPIATKEGDEELGCGTTRVLDGVVMMVSGTDSNGVQIGEFGSSEGY LDENIMWGRPGCPDKGEIFIKTNVTIKEKTNMERPGPLAAHAATDVITEEIRKALKKAEE SLAVDTETFNQLRRPGKKKVVIVKEIMGQGAMHDNLLLPVEPVGVLGAKPNVDLGNVPVV VSPLEVLDGCIHALTCIGPASKEMSRHYWREPLVLEVLHDKELDLCGVVLVGSPQINSEK FYVSRRVGMTLEAIGADGAFVTTEGFGNNHIDFASHIEQIGKRGIKVVGMSFCANQGALV VGNKYMNAMVDNNKSEAGIENEILANNTLCHEDAIRAIYMLKAEMFGEEITKAERKWNPN VKLQNVELISNLSGKPVQLVENETSLPMSDKFKEKYLQS >gi|333758476|gb|AFIH01000001.1| GENE 1530 1516639 - 1518144 892 501 aa, chain - ## HITS:1 COG:TM0244 KEGG:ns NR:ns ## COG: TM0244 COG4656 # Protein_GI_number: 15643016 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfC # Organism: Thermotoga maritima # 4 307 49 368 451 171 35.0 2e-42 MKEILLKQHIGSPAKAVVKPGDRVRRGSLLAVPEGLGANVHSSVDGLVKEIKEDRIFVEE SVEQSDGFEPISGGDILSLIREAGIVGMGGAGFPTAKKLNIDLKGGYLLVNAAECEPLLK HNMRQILEQPEKTLRGINYAMQSCKAAKAVIAIKKKHEEEINLLLRTLPDFPNITLHLLP DLYPMGEERAVVREVLGILLPPTALPSEAGAVVINVETCLRIAEAVEEKKPSFLKNITVA GKLKKGKEAQVFMDVPVGTTVGELITMAGGIDGEYGEILFGGPFTGTAVSLSTPITKTSG GILVTEPFPDLKGAQTGVLICACGGNMDRMEDLCKKYNATLTAVQACKQAVDVRGTLKCE NPGNCPGQAAKILHFKNKGCTDILIGNCSDCTNTVMGSAPKMNLTVHHQTDHVLKTVGME PMRYLTKSKTVEQLPVNEEGRQIPFPKEEKKQGSSGGGEERRDSGTLDKKEEQKLGTEAF IEEGLFHIRIEEGQDIHIEFS >gi|333758476|gb|AFIH01000001.1| GENE 1531 1518147 - 1518254 87 35 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFSDKLLVIFGIILYKYKLWYNAEKKSSYMDRGAI >gi|333758476|gb|AFIH01000001.1| GENE 1532 1518301 - 1520235 1383 644 aa, chain - ## HITS:1 COG:CAC0508 KEGG:ns NR:ns ## COG: CAC0508 COG0322 # Protein_GI_number: 15893799 # Func_class: L Replication, recombination and repair # Function: Nuclease subunit of the excinuclease complex # Organism: Clostridium acetobutylicum # 13 635 2 623 623 552 45.0 1e-157 MESSSEFTEEKEFNIPEELKKLPKAPGVYLMHGAMDEIIYVGKAKNLRNRVKQYFQKSYK KSVKIQQMVSQIQRFEYIIVDSELEALVLESNLIKENKPRYNTVLKDDKSYPYIRFSVEE DYPRLFFTRSKRNKLSKYYGPYTSVEQVREVIELLRKTIHIRNCNKVFSEKKPLPRPCIY YDMGQCDAPCTLKQSKEEYRALIPKVSAFLSGKTEELIHSLQEKMMEASECLDFEKAMEY RDLISGIHTLEKRQKITALDGEDRDILGIRRDHSDCVIQIFFVRDGKIVGRDHSFLKIDE EESDEEILSLFLRQFYSGTPFLPREIHLPCQLQDQEMIEEWLSALKGKKVHLVNPKQGDR EKLVELAGKNAGILMLRYVEKYRNEKKKQAIALEELKELANLEKLPSRIESYDISNTSGA LTVGSMVVYQDGKEKTNDYRKFRIQSVIGQDDYASMREMLYRRFSHGLEEKKENRKQDKK DEMGSFSQFPDLILMDGGKGQVSICLSVLQELGISIPVCGMVKDEHHRTRALLVDFKEVP ISTHGECFKFLTRVQDEVHRFAISYHRSLRMKEQVHSLLDDIKGIGPRRKKALLRKFHDV VGISKASYEEIRSIPEMDEQSSREVLRFFQERKDEEKEEFVKET >gi|333758476|gb|AFIH01000001.1| GENE 1533 1520225 - 1521571 1001 448 aa, chain - ## HITS:1 COG:FN0456 KEGG:ns NR:ns ## COG: FN0456 COG1306 # Protein_GI_number: 19703791 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 77 408 44 377 380 218 35.0 1e-56 MRVKSYLWILIILFCFLSACGTKAPLKYKVNKTPELKQYESELAEKAEFQESLAQESIEA KERAEEEEKAKAALIWKKPAISKERKKVKGIYITDNTAGSGRMEEILSGMKGTELNALVI DIKNDQGRISYRMNNPMVKELGADLKIIPDLPALLKRCHDEGIYVIARLVCFRDPYIGSK HPEWMNQKADGSLFEDNNGLNWVNPYKKEYWDYLASIAESCADDGFDEIQLDYVRFCTEK GMQEVVYPEEAKTDKTKIITEFVRFMADRMAQKKVFFSTDVFGTIIGSYVDSMSVGQDYA VMAECVDYMCPMIYPSHYGNGNFGIAYPDTEPYKTIQGALAASHKALFLEAGNQSYQATV RPWLQGFTASYLQHYISYGKEEIRAQIQAVYDSGYEEWLIWNAANNYDFSAFLSKEEAEV EEKSRKEVGKSVQMTQTEESSEERRNGE >gi|333758476|gb|AFIH01000001.1| GENE 1534 1521906 - 1523111 931 401 aa, chain - ## HITS:1 COG:FN1423 KEGG:ns NR:ns ## COG: FN1423 COG0426 # Protein_GI_number: 19704755 # Func_class: C Energy production and conversion # Function: Uncharacterized flavoproteins # Organism: Fusobacterium nucleatum # 1 399 1 403 405 416 49.0 1e-116 MYSYRKITDDLVYVGVDDRRLPLFENLFPLERGVSYNSYLLLDEKTALLDTCDHTVAHQF LENVEHALGGRTLDYLVIHHMEPDHCGSFEDIYRRYPDLCIISNMKTFQMLEQFFSFAIP EKNRIVVKDGEEFSFGKHSFKFLFAPMVHWPEVMFSYDITDSILFSADAFGVFGCNNGNI FASEQNYKDKDFVDDARRYYANIVGKYGPQTQAALKKTGACSIKMICPLHGPIWDEDLSF ILEKYDLWSKYQPEDKAVVIYYNSVYGNTESIINHFALELGTRGVRNIRIYDVSKTEVSY LIGEAFRASHLVFGATTYNNGLFPKMENLLTDMKNLSVQNRTVSIIENGTWVPQSAKLLK EILDGMKGITYLASPLTVKSSTVNREALEGLADMIAKDVLS >gi|333758476|gb|AFIH01000001.1| GENE 1535 1523178 - 1523342 202 54 aa, chain - ## HITS:1 COG:CAC2778 KEGG:ns NR:ns ## COG: CAC2778 COG1773 # Protein_GI_number: 15896033 # Func_class: C Energy production and conversion # Function: Rubredoxin # Organism: Clostridium acetobutylicum # 1 54 1 54 54 73 70.0 6e-14 MKKYVCTVCGYIYDPEVGEEGAGVAPGTAWEDVPEDFLCPLCGVGKDQFEVSED >gi|333758476|gb|AFIH01000001.1| GENE 1536 1523587 - 1523769 318 60 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227872300|ref|ZP_03990657.1| possible ribosomal protein L32 [Oribacterium sinus F0268] # 1 60 1 60 60 127 98 3e-27 MSICPKNKSSKARRDSRRANWKMGATNLVKCSKCGALVMPHRVCKACGSYNKREIIKVED >gi|333758476|gb|AFIH01000001.1| GENE 1537 1523786 - 1523902 66 38 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSVFSTEMFLLWNFPFRVWGRAHTTIKKHDQIYRFQFG >gi|333758476|gb|AFIH01000001.1| GENE 1538 1523972 - 1525165 1165 397 aa, chain - ## HITS:1 COG:TM0274 KEGG:ns NR:ns ## COG: TM0274 COG0282 # Protein_GI_number: 15643044 # Func_class: C Energy production and conversion # Function: Acetate kinase # Organism: Thermotoga maritima # 1 397 1 399 403 465 59.0 1e-131 MKILVINCGSSSLKYQLIDMEGEKVLAKGLCERIGIQGSRMKHEVPGQEDYIVETDMPDH SVAVKLVFDALTGEHGVVKSVDEINAIGHRVLHGGNKFTQSIVVNEEVKKVIRECFDLGP LHNPANLMGIEACEKVVPGKQNVAVFDTTFGMTLPEKAYFYAIPKEYYDKYAIRRYGFHG TSHAYVSAETIRFGGLDPEKAKVIVCHLGNGASISASIGGKAVDTSMGLTPLEGLIMGTR SGDIDGAVIQFIANHENKSVDEVLNILNKKSGVLGMTGISSDFRDIEQAAEKGNHMAEVA LDAFRYRVAKYIGAYAAAMNGVDAIAFTAGVGENDKVTRRLVVEQYLGYLGAKIDPERND VRGKETLISADDSKVKLFLIPTNEELAIARDTQRLTK >gi|333758476|gb|AFIH01000001.1| GENE 1539 1525235 - 1526239 1031 334 aa, chain - ## HITS:1 COG:CAC1742 KEGG:ns NR:ns ## COG: CAC1742 COG0280 # Protein_GI_number: 15895019 # Func_class: C Energy production and conversion # Function: Phosphotransacetylase # Organism: Clostridium acetobutylicum # 1 331 1 330 333 355 56.0 8e-98 MSFIEDVKAKAKARMKTIVLPEAEDKRTLEAAQQIKKEGFANLILLGNKETVEKDARNYG FDVSGIEVVDPKTSPSLDDYVATLVELRKSKGMTEEEARKLLTESNTYFAVMMVKKGDAD GLVSGACHSTADTLRPSLQILKTKPGTKLVSAFFVMVVPDCPYGENGTFVFSDCGLNQNP TAEELAAIAESSAESFRFLVGKEPKVAMLSYSTMGSAKHDDVTKVQEATRIAKENNPDLL LDGELQLDAALVESVASLKAPNSKVAGHANTLIFPNLDAGNIGYKLVQRLAKAEAYGPMT QGIARPVNDLSRGCSAEDIVGVVAITAVQCQLYD >gi|333758476|gb|AFIH01000001.1| GENE 1540 1526401 - 1526733 388 110 aa, chain - ## HITS:1 COG:BH0043 KEGG:ns NR:ns ## COG: BH0043 COG3870 # Protein_GI_number: 15612606 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 1 110 1 109 109 91 37.0 3e-19 MKLIYAIIRNDNEDDVIQALMQEHFVVTRLSTTGGFLKKGNTTLMIAVEDSDVDRCIDVI KAQCGRRQEITVNMPYLSGSSIMNYTTMPMNVEIGGATIMVVPLERFEKY >gi|333758476|gb|AFIH01000001.1| GENE 1541 1526832 - 1528049 710 405 aa, chain - ## HITS:1 COG:CAC1741 KEGG:ns NR:ns ## COG: CAC1741 COG1323 # Protein_GI_number: 15895018 # Func_class: R General function prediction only # Function: Predicted nucleotidyltransferase # Organism: Clostridium acetobutylicum # 7 357 3 356 402 172 32.0 8e-43 MINGKKVVGVVTEFNPFHDGHAYFLHEIRKKYAADYIVAVMSGDFVQRGEPAFLSKWERV KLALKRGVDLIVQLPVLFSLSGSLDFAYGSVKLLSELGFVDQIVFGSECGDLERLRETAI FLRKEEEHPEYQAKLRKYLANGDSYPKAREKALSLYYPGEILPNDNLGISYLMAADILKS QIEFGVIQRNPAFSSAHAIRIEKREKAMNEISALQSGKKRDNFLILEKEESVAGRESYGD MESLKEFLLYRILELEREEQSLSSFLDISADLEQRIFKRIREGGALRGKEGTVESFIQSL KGKNYTYSRVSRALLHVLLHIREEDMKQAKAEKSPYFRILGCSKRAEVLLHYLPENSIFR LGHSLRENLGLKDNYMMKIDLFGRKIYQAILLGTEEEYREFFLKI >gi|333758476|gb|AFIH01000001.1| GENE 1542 1528097 - 1528873 698 258 aa, chain - ## HITS:1 COG:CAC3538 KEGG:ns NR:ns ## COG: CAC3538 COG1235 # Protein_GI_number: 15896774 # Func_class: R General function prediction only # Function: Metal-dependent hydrolases of the beta-lactamase superfamily I # Organism: Clostridium acetobutylicum # 1 258 1 261 261 188 39.0 7e-48 MRFASLSSGSDGNASYIGTEEAHILIDCGVGIRTIEAGLKALDLSLQDIDAIFLTHEHFD HIKALGSILRKQEIPVYASLGTLQGTLLCKSLKDFPKELLNPILTDRKLSIKDLDLFPFS IHHDTREPLAYRAESGEKHCAIATDLGSYDEYTIKHLKDTDVLLLEANHDIEMLEKGPYP LELKRRILSDFGHLSNESSATLLEKVAGSTLRQVFLGHLSKENNTPKLALQAIREKLSEK DLPITVAKHGEISEIVEW >gi|333758476|gb|AFIH01000001.1| GENE 1543 1528842 - 1529516 277 224 aa, chain - ## HITS:1 COG:no KEGG:Closa_1884 NR:ns ## KEGG: Closa_1884 # Name: not_defined # Def: dephospho-CoA kinase # Organism: C.saccharolyticum # Pathway: Pantothenate and CoA biosynthesis [PATH:csh00770]; Metabolic pathways [PATH:csh01100] # 35 222 3 190 193 77 29.0 3e-13 MQKKDLAEKNSSVEIPYLAEKTVITEKNRKSEKNILAVIGGMGSGKSTVLSVLEREGQYE RLEMDRLAKNCYLDSVFLKELSSVLPKDVFTEKGELNFPLFRALLLKEESYRKAVEERVH PLVFHMAAQAIFKARKEGMKLAVETALPNEAFLSLCDAVLYVDCPFETRLSRLTKNRGYR REEAERMIKAQDIEKYKERADFVLFNDGNRERTEDAIRQFIQRF >gi|333758476|gb|AFIH01000001.1| GENE 1544 1529604 - 1529861 242 85 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227872291|ref|ZP_03990649.1| ## NR: gi|227872291|ref|ZP_03990649.1| conserved hypothetical protein [Oribacterium sinus F0268] conserved hypothetical protein [Oribacterium sinus F0268] # 1 79 1 79 88 84 64.0 3e-15 MEIDKKDLLPLSFLKKSPYTGSFQGICYRIEKQEEGESKSLLVYTWPEPYAFSHTPEEAK EKKSFPFSEEGLEEIRLYLSRLGNE >gi|333758476|gb|AFIH01000001.1| GENE 1545 1529861 - 1532455 2864 864 aa, chain - ## HITS:1 COG:CAC1098_2 KEGG:ns NR:ns ## COG: CAC1098_2 COG0749 # Protein_GI_number: 15894383 # Func_class: L Replication, recombination and repair # Function: DNA polymerase I - 3'-5' exonuclease and polymerase domains # Organism: Clostridium acetobutylicum # 349 863 7 530 531 435 48.0 1e-121 MKQNKLLLIDGHSILSRAFYGVPILSNHEGIPTNGVFGFLNIFFKELELEEAEHVAVAFD MPVPTFRHKMFSDYKGTRKSMPEELKQQVPILQELLTAMNVPILTMEGYEADDILGTVAK RMQEEGKEVTIVSGDRDLLQLSDKHIKISLPKTAKGETNIYNYYPKDVEAEWGVSPKEFI DLKALMGDSSDNIPGVPGMGEKTATWIIAKYHSIENALAHTDDPEFKVPRKPKAAEDLKT HFELAKLSKELATICIDAPIAFRFEDAKLENYANAKSLALVKKWEFRSLIPRFSSENTEE SPAFQLKPWKDVTDPYLFQIVVKDAVKQGELGLILAEEEEKMLYLALSEERLYRVPLRMS EEKLPELFETCKIYTLESKKEMHLHEIFTEGEVYDLAIAAYLLNPLKESYFYDDLARDYL SLILPGKKELKDSREEGIYQALIALKAKDSIFSKLKEEGQWELYEKIELPLARTLYSMEK TGILVDKEELLSYGKVLKEKIDELQKEIYAMAGEEFNINSPQQLGVILFEKMGIAGGKKT KTGYSTAVDVLEKLSEDYPIVAKVMEYRTYAKLNSTYAEGLLNYIGEDSRIHGVFQQTVT ATGRLSSTDPNLQNIPIRTEMGRHFRSVFIPKEGCVFLDADYSQIELRILAALSKDEKLI EAYRMDRDIHKVTASQVFHVPLDEVTDELRRNAKAVNFGIVYGISAFGLSEGLSIGRADA KEYIERYFTTYPKVKEYLDSEIAFARENGYVKTVFGRRRPIPEIHASNFMRRSFSERVAM NSPIQGTAADMMKVAMNAVYEELKRKELQSRIVLQVHDELLLEVPEEELDGVREILVSSM ENALTLPVPFLVEAKTGKNWEEAH >gi|333758476|gb|AFIH01000001.1| GENE 1546 1532488 - 1532739 113 83 aa, chain - ## HITS:1 COG:lin1600_1 KEGG:ns NR:ns ## COG: lin1600_1 COG0258 # Protein_GI_number: 16800668 # Func_class: L Replication, recombination and repair # Function: 5'-3' exonuclease (including N-terminal domain of PolI) # Organism: Listeria innocua # 4 57 2 55 316 61 51.0 4e-10 MKQNKLLLIDGHSILSRAFYGVPILSNHEGIPTNGVFGFLNIFFKELELEETEHVAVFLG TVFFFILFYSRLFALDFSIKQNF >gi|333758476|gb|AFIH01000001.1| GENE 1547 1532786 - 1533130 249 114 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227872289|ref|ZP_03990647.1| ## NR: gi|227872289|ref|ZP_03990647.1| hypothetical protein HMPREF6123_0586 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_0586 [Oribacterium sinus F0268] # 1 109 1 110 111 114 52.0 2e-24 MNCLEARKYIYDFVQGNWEEDRLEDFLQHIKTCPDCKEELRVTHMIYHGLRSLDGKENMP VDRSYRKMEEEAEHFLRLGHFFSAVRISSETLVFWALFFSLFYFILGYLPLIFR >gi|333758476|gb|AFIH01000001.1| GENE 1548 1533348 - 1533989 770 213 aa, chain - ## HITS:1 COG:SA1914 KEGG:ns NR:ns ## COG: SA1914 COG0035 # Protein_GI_number: 15927686 # Func_class: F Nucleotide transport and metabolism # Function: Uracil phosphoribosyltransferase # Organism: Staphylococcus aureus N315 # 8 213 4 209 209 265 61.0 4e-71 MNQFGENVFILDHPLITHKISILRDKNTGTNEFRQLVEEIAMLMGFVALSDLPMTKVPVE TPIETADTYVIAGRKLAIVPILRAGLGMVSGLTALVPSAKIGHIGLYRDETTHKPVEYFC KLPNPIEERIIVVCDPMLATGGSGVDAINLIKKHGGKKIKFVCIIAAPEGVKKLHEEHPD VQIYVGNLDRELNKNAYICPGLGDAGDRIFGTK >gi|333758476|gb|AFIH01000001.1| GENE 1549 1533992 - 1534669 529 225 aa, chain - ## HITS:1 COG:CPn0749 KEGG:ns NR:ns ## COG: CPn0749 COG0110 # Protein_GI_number: 15618658 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Chlamydophila pneumoniae CWL029 # 77 198 80 204 208 92 40.0 5e-19 MKKEACTTKKVFPELKAPYDSLLKDTLYPWEALPKIKAWIKEVQKSLPEDFNEVKPGVFI HKTVKLYPNVYLGENIILMEDCELRPGAFLRENVFAGAGSVLGNSCEFKNAVLFPHVQTP HYNYVGDSILGEYSHLGAGALTSNVKSDKTLLILHFEDGEIETGLKKFGAILSDHVEVGC QSVLNPGTIIFSHTNIYPLSAVRGIIPGGSIYKDKNTLVKKRGEE >gi|333758476|gb|AFIH01000001.1| GENE 1550 1534791 - 1536731 1601 646 aa, chain - ## HITS:1 COG:CAC3567 KEGG:ns NR:ns ## COG: CAC3567 COG0550 # Protein_GI_number: 15896801 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Clostridium acetobutylicum # 2 637 3 588 709 348 36.0 3e-95 MKKLFIAEKPSVAKQFAEALGVATGGGNRGYLENQDYIFTWCVGHLISMSYPEKYDEELK KWKMESLPFIPKEYLYEVIPSVKEQFSVVSALLQRKDLETIYICTDSGREGEYIYRLVAS QCPEITAEEKRVWIDSQTKEEILRGIRDAKAKTAYDRLGTAAYLRAKEDYLMGINFSRVL TLRYGRELARALGKEKSTVIAVGRVMSCVLAMIVQREMEIRAFQKTSFWKVIGDFSLDGE SAALSCEFRGKEESKYYRETDLYKNMGFLQAEKAKAFQEIFRPYPQEGSITSLEKKKEVK NPPLLFNLAELQNECAKILKISPDDTLKLVQELYEKKLCTYPRTDARVLSTAVSKEIEKN IRGLSAFPQYLPFAKDILERKSYSGIAKTKYCDDKKITDHYAIIPTGQGRAQYNSLGTLQ KKVFDFIVRRFFSIFYPSAEYKKYNLSITVLEEEFLASEKRLEKPGYLQLYEKSIEKEEK EGDSENEENHVSGLSGLSGLKKGSKVYLMSTALKEGETSPPKRYTSGTMILAMENAGKLI EDESLREQIKGSGIGTSATRAGILTKLEKNEYIHLDKKNQQLSPSLLGEKIVHILWNSIP SLLNPTLTASWEKGLSYVEEGKIEEKEYMDKLEDFVRKNTEKVKFA >gi|333758476|gb|AFIH01000001.1| GENE 1551 1536733 - 1537782 328 349 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15900011|ref|NP_344615.1| aldose 1-epimerase [Streptococcus pneumoniae TIGR4] # 10 342 12 340 345 130 28 2e-28 MKVQKLGHFVDGREVHLFTMENKNGVKASFTDLGGVWLSLLFPNRSGKELDLLLSVENWE DIMENPGHMGEVVGRNCNRIAGGMFNLNNKLYRLFLNDGQYSNCHSGPDYYGRRLFTVKE KGENTLTLALFSQDMDQGFPGDLDFSVRYTLTDDNEVKIRYKGLSNKDTIMNFTNHAYFN LMGHDFGSLSEHEICIHADSYTPSDSHLIPTGEICAVEGTAFDFRTEKAMLDTKRLKNEL KAVGGYDHNFCIRDYDGTLRCAAEVFCKKSGIAMEVETDCPGIQFYTGNFMAAEDLGKGG CDYGKHSGFCLETQFYPDAINKPNFPSPVVKAGVVYKSETIYRFFRRLI >gi|333758476|gb|AFIH01000001.1| GENE 1552 1537927 - 1539006 1083 359 aa, chain - ## HITS:1 COG:CAC0568 KEGG:ns NR:ns ## COG: CAC0568 COG0136 # Protein_GI_number: 15893858 # Func_class: E Amino acid transport and metabolism # Function: Aspartate-semialdehyde dehydrogenase # Organism: Clostridium acetobutylicum # 17 357 18 358 359 447 62.0 1e-125 MEKFKVGILGATGMVGQRFATLLENHPWFELACLAASPRSKGKTYEEAVGDKWKLDIPMP ESVKKMVVKDVSDIESVKEGLDFVFSAVDMNKEEILAIEEAYAKAELPVVSNNSAHRWTE DVPMVVPEINPEHYKIIERQRKRLGTKKGFIAVKPNCSIQSYTPAFAAWKEFEPYQAVIS TYQAISGAGKNFETWPEMVGNIIPYIGGEEEKSEREPLRVLGTLTEKGIALKEDLVISAQ CIRVPVLNGHTATVSVSFRKKPTKEELISALRNYKGLPQERNLPSAPKHFIQYLEEDNRP SVLEDVNYEKGMGVSIGRLREDQLFDYKFVGLSHNTLRGAAGGGVLSAEMLVELGYITK >gi|333758476|gb|AFIH01000001.1| GENE 1553 1539184 - 1541418 2153 744 aa, chain - ## HITS:1 COG:BS_gyrA KEGG:ns NR:ns ## COG: BS_gyrA COG0188 # Protein_GI_number: 16077075 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Bacillus subtilis # 4 742 8 739 821 469 36.0 1e-131 MAEQILSTEYSEEMQKSYLDYSMSVITSRAVPDIRDGLKPVQRRVLFDMGELRVFHDRPT LKSARICGDTMGKYHPHGDSSIYETLVVMAQDFKRMQALIEGQGNFGSIEGDSAAAPRYT EARLEAFTEKAMLEDLSLSVPFQPNYDGKLMEPEVLPAKIPYFLLNGSEGIAVGMTTSTP SHNLAELINLILAYMKNPEMSLEEMLRIMPGPDFPTGGMVANKDDLAEIYATGQGKLRLR GKLVFEKKQGKNDRDKLVITEIPYTMVGAGISKFMQDVAGLCDEKKITDITDISNQSGEQ GIRIVLELKSNADIEKIENILYKKTKLEDSFPVNMLAIAKGRPETLSLKRVLEEYLSFQE ERIHSKFGKLLEKEEKKKEIEEGLIKAVDVIDAIIALLRGAKSQKEAKIALMQGDSSVLQ LKDRDLIFLKDIESFSFSEVQAQAILDMRLSKLIGLEILSLQKSYRETLKNIKNYKAIVS SKEVLYKHLEEELLSIREEFGRKRRTEIRNAEEAVYDENAIEEMDLFFVQDRFGYGKLLE PQVYQRNKESIEADYPFILSCKNTDRLLFFTSEGNLHQVKVLDYPLAKFKDKGIPLDNLS KFSSDKEIVLSVFAKTALLQETLLFLSRNGYGKRVEGAEFDTQNRLVQATKLVDDSLVAV LPVKAEEQLVLESEDSFFLRFPVEELPVQKKTARGVCAMSLRKGDSVKSVYLLSEQTELK LSGKNLSLSRLKLAKRGGKGAKHS >gi|333758476|gb|AFIH01000001.1| GENE 1554 1541434 - 1543362 1750 642 aa, chain - ## HITS:1 COG:CAC0006 KEGG:ns NR:ns ## COG: CAC0006 COG0187 # Protein_GI_number: 15893304 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Clostridium acetobutylicum # 5 635 8 629 637 580 50.0 1e-165 MAKNYNADSITVLEGLEAVRRRPGMYIGSIGSRGLNHLIYEILDNSVDEHLAGYGTEIDV TLGKDGSCTIRDKGRGIPVDRHQKGISAERIVMTTLHAGGKFDNSSYKTSGGLHGVGSSV VNALSKYMRVRVFQDGKIYEDEYSRGIPTKELVDGLLPVVGKTRETGTETCFIPDDMIFE KTRFKEDWLKSRLHETAYLNPNLHLFFRDERGDEPVEIEYYEPNGIVSFVEELVKDSEKA VTPVIYFKGKSEKTELECAFQFTDSFEENILGFCNGIYTVEGGTHIVGFKTKFLQLINGY ARQLGVLKEKDQNFTGADSRNGMVAVLSVKYPEPVFEGQTKTKLASLEAAKEVSQITGEE LERFFDRNVEIVKAILTCAEKSAKIRKQEERAKVNLLSKSKYSFDSNGKLANCISKNAEE CEIFIVEGDSAGGSAKTSRNRHTQAILPLRGKILNVEKASMDKVLANAEIKTMINAFGCG FSEGYGNDFDITKLRYHKIILMTDADVDGSHIDTLLLTFFYRFMPELIQEGHIYVSMPPL YLVTPQKKTEKPQYLYDERALTEYQKKHGTEGYDLKRFKGLGEMNPKELWDTTLNPENRV LKRVEIEDAKLASRVTTMLMGAEVAPRREFIFTHAREAEIDT >gi|333758476|gb|AFIH01000001.1| GENE 1555 1543570 - 1545102 1230 510 aa, chain - ## HITS:1 COG:CAC2961 KEGG:ns NR:ns ## COG: CAC2961 COG4468 # Protein_GI_number: 15896214 # Func_class: G Carbohydrate transport and metabolism # Function: Galactose-1-phosphate uridyltransferase # Organism: Clostridium acetobutylicum # 5 506 6 494 497 503 50.0 1e-142 MEEVLERLLAYGEYTGLIEKEDTIYCYNSLAGLLAFEPKACNEEHIKEEIKKIKKEELES GEYLEKVLKEILDYALVKGIIEDDSTITKDLFDTRVMGVLTDRPSNIRKRFWDKYASSPK EATEYFYQFSQDNDYIRRYRIKKDIRYKVESSYGELDITINLSKPEKDPKKIALLGKTVS HSYPACMLCKESEGYFGRLDFPARENHRIIPVKLSGENFYFQYSPYVYYNEHCIVFHEEH KPMKIDSAVFGKIFSFVEQFPHYFLGSNADLPIVGGSILSHEHFQGGNYSFPMEKAGLRE EFTLDKFPEIHFGIVNWPMSVIRLNGKDKERCAEAASFILDRFRSYSDESLSILSHTGDT PHNTITPIARKRGELFELDLVLRNNRTTEEHPLGLFHPHEEWHHIKKENIGLIEVMGLAV LPARLRTELSDLGEAILENRDISSDPILGKHHAFSLEIKKKYKNITKDTVEEILRAEVGK VFLEVLRDAGIFKEDEAGKEGFRRFIASLS >gi|333758476|gb|AFIH01000001.1| GENE 1556 1545288 - 1546307 993 339 aa, chain - ## HITS:1 COG:BS_galE KEGG:ns NR:ns ## COG: BS_galE COG1087 # Protein_GI_number: 16080937 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose 4-epimerase # Organism: Bacillus subtilis # 1 339 1 337 339 460 65.0 1e-129 MKILVSGGAGYIGSHTLIELLESGYEVVAFDNFYNSSPKAIERVKEITGKDFAFYEADML DKEALRKIFKEHPDISATIHFAGLKAVGESVAKPILYYHDNFLGTLNLVEVMDEAGCKNI IFSSSATVYGDPAEIPITENCPKGTCTNPYGWTKWVQEQILTDLQKAKPEWNVILLRYFN PIGAHISGKIGEDPKGIPNNLLPYVAKVASGALEKVHVYGNDYDTKDGTGVRDYIHVVDL AKGHVKAIERLAKNDGVFVCNLGTGKGYSVLEIIHAFEKASGKEIPYVIDGRRAGDIATC YSSPEKAEKELNWRAEKGIEEMCEDAWRWQSRNPNGYNS >gi|333758476|gb|AFIH01000001.1| GENE 1557 1546373 - 1547557 1023 394 aa, chain - ## HITS:1 COG:BS_galK KEGG:ns NR:ns ## COG: BS_galK COG0153 # Protein_GI_number: 16080871 # Func_class: G Carbohydrate transport and metabolism # Function: Galactokinase # Organism: Bacillus subtilis # 8 392 3 387 390 397 50.0 1e-110 MDELEIMQSLKVKFQELFGNSENARFFFAPGRVNLIGEHTDYNGGHVFPCALSMGTYACV KKRQDGLFRFYSLNVESAGVITADENSFQPLEDKQWASYLKGVIWAFRKRGYSLPEGLDV VLYGNIPNGSGLSSSASLEVLMGTILKEFYGLSVSFPEIALIGQYSENNYNGMNCGIMDQ FASAMGKKDHAIFLDTASLEFSYAPLVLSDYALIITNTNKKHKLIGSAYNDRRRESEEAL KILQKFAEIKTLGDLSDEEFFRLEEEIKDPIIRKRAKHAVLENNRTIAAKKALEEGNYNE FGRLMNLSHVSLRDDYEVSCEESDLLCETAWSLPYVLGSRMTGGGFGGCTVSLVKRDKIK DFEEALQKVYEPKIGYPCSFYEAEIADGPRELNF >gi|333758476|gb|AFIH01000001.1| GENE 1558 1547630 - 1548283 388 217 aa, chain - ## HITS:1 COG:no KEGG:Hden_0148 NR:ns ## KEGG: Hden_0148 # Name: not_defined # Def: hypothetical protein # Organism: H.denitrificans # Pathway: not_defined # 1 142 65 210 266 84 36.0 4e-15 MYDEEIREELFFFLEEQYGKSRVIEEKVIGKARADCVLITENAFIGVEIKSDHDTYQRLS EQVKQYNSFFDYNILVVGTKHAHSAKDHVPPFWGIITVEEVEGKADFYQLRKEERNPYRD YTKKGSLLWKEELVSILEKYGFPLYRQKSKKVQFSYLKERLSEDELDREMSFQLLERTYP EGDALWTQKKRRRRKRKPNVLVSHVLKRKNRKDKAEG >gi|333758476|gb|AFIH01000001.1| GENE 1559 1548371 - 1549795 822 474 aa, chain - ## HITS:1 COG:no KEGG:bpr_I0823 NR:ns ## KEGG: bpr_I0823 # Name: not_defined # Def: GDSL-family lipase/acylhydrolase # Organism: B.proteoclasticus # Pathway: not_defined # 27 262 2 249 389 66 25.0 3e-09 MSFLKKEQRGIVEEIQQMQREEEKKSYGKKRKSLLGIFLTVLPLILGALVVFLLYRYGQQ VIRERDTHNEALIHEATQAPSDADYSGALFEKLKNGEELRILLLGDGDLHSDSASLTALK TKLEKDFGGKIVFEEAELPDNATSLSGYLILKGEGSGANLSSNPDLIVLSFGNYDEPYTF PYYYELLLRTVMENYSESSILPIISYKALNPEGYSKDNAMVLQNISSHYGLETLNFAAVL AEQEEHPDSVMENQEEFQRFQEKYFVSAMISAMEMVKKGEEASPINPILEEGRECIAIPR SLWKDYGATALLLSEDELEKLSLKGRHGILALSTALHAGENKGNLYVDGILEGNYSLTGE SYLGILSRDVSMRQQCILNFETEEEKNNFRSLFFLSPIPLEKGLKNGTVLPLPEITAESS QEIPSETAVPEESSTERQTQERNSDAENKVEEKTNTMEGSTEELIGIYEGDAHS >gi|333758476|gb|AFIH01000001.1| GENE 1560 1549783 - 1551126 994 447 aa, chain - ## HITS:1 COG:CAC0747 KEGG:ns NR:ns ## COG: CAC0747 COG1376 # Protein_GI_number: 15894034 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 2 447 13 466 466 237 31.0 3e-62 MKKQILLSLGVSLLSMISLVLLVLTFMEGRFFPGTMVNQVDLSLMKREEAAAYFSKWKQD EFKLYIMDKDGNTEALEGKDIHLSYEPDFSEIPKLDSFYILFSLGKKKDYPLKGKLQYDE SALEEYVKNYAASHSTEEAPRAMFLSGYVPGAGYLLGAERSGGKISEEALQNAIKSAIAE GKNQIKLADAGVYPKAENAENLENLKEEKNNALPGIIRYNFSGEVIELNSDTTLSWFKDG GTELDISRVKQYVKNLKNYTDTSGTERSFLTEDGRILSLGGKYGFSLSEKKEIKKLTDSL LMRENIIRDAEYDMVALARGAEDIGNTYVEVDIGRQKIFYYEDGVLQLSSDCVTGNLARR NGTPDGIYALSYKAKNATLKGPDYETKVNYWMPFNRGIGFHDALWRNRFGGKIYQNAGSH GCINLPFSSAENLYQKVYQGIPVVCHF >gi|333758476|gb|AFIH01000001.1| GENE 1561 1551250 - 1552038 398 262 aa, chain - ## HITS:1 COG:BH0167 KEGG:ns NR:ns ## COG: BH0167 COG0101 # Protein_GI_number: 15612730 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthase # Organism: Bacillus halodurans # 19 254 6 238 263 171 41.0 9e-43 MLVKALCLLGGKMKQNYKLLLSYDGSRYFGFERQKDQELTIQGKLEAVLTAMPRNDTDWV ETFSAGRTDAGVHARGMCCHVFLDTNFSEEEIQNYCNHYLPEDIAVNSLKKASERFHARY LATGKIYRYSCHTGKNKEVFERKYLYHLEEEPDIAAMQKAAEFLIGEKDFKSFCGNPKMK KSTVRKIFNIEIKKNGSVLRFYFHGSGFLQYQIRIMVGTLLEVGFHKRRAEEVEEILLAK DRTRAGYTAPAKGLCLMKVEYD >gi|333758476|gb|AFIH01000001.1| GENE 1562 1552046 - 1552957 850 303 aa, chain - ## HITS:1 COG:MK1482 KEGG:ns NR:ns ## COG: MK1482 COG0583 # Protein_GI_number: 20094918 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Methanopyrus kandleri AV19 # 6 250 9 254 304 132 31.0 6e-31 MNIKQLEAFVRIVKNKSFSQTAKELYLTQPTVSSYISSLEEDLGVQLFTRTTKEVHTTSE GEQIYLYAKDIVNLSNKIRNAFKEEQKDDINEIVISSSSIPGQYLLPGMLANFSKRYPST EFRVHETDSKGAVSDVAEHRADIGFCGTIVPKMACTFLPFYEDELILITPNTSYYQKKKE SKDLSFLAQADFVMREQGSGTKQEALKILQQNGLNLDNMKVVARFANTGAVLLSVKEGVG VAIVSKLAARSEIKNQEVLDFPLQEGGYFRKIYMVSNSNYPLSKRAKLFMQMIQNHVDKR KIL >gi|333758476|gb|AFIH01000001.1| GENE 1563 1553035 - 1553994 800 319 aa, chain - ## HITS:1 COG:Cj1504c KEGG:ns NR:ns ## COG: Cj1504c COG0709 # Protein_GI_number: 15792818 # Func_class: E Amino acid transport and metabolism # Function: Selenophosphate synthase # Organism: Campylobacter jejuni # 11 318 5 307 308 229 41.0 4e-60 MSKLPKFDFDPKVLVGLDTSDDAAVYELTDDLAMIQTVDFFTPIVDDPYMFGQIAAANAL SDVYAMGGIPKLALNIVGFPNCLSPDVLSEIMKGGADKVMEAGAILIGGHSIQNDEPFYG LCVSGLIHPSKVLKNYGAKPGDVLILTKQIGTGIINTAAKVSLADSRAIQEATTVMASLN RKPKEVMDRFTVHACTDITGFGLLGHSLEMAEASKVSFLLHKKDIPFIKESLDYAEMGLV PAGAHENRKFQEEKVEFKGIDTAFQDILFDPQSSGGLLYSIPKEEKDAVLEAIEKAGLPT RFSCIGEVVEFSEKNIFVD >gi|333758476|gb|AFIH01000001.1| GENE 1564 1554222 - 1554944 372 240 aa, chain - ## HITS:1 COG:MJ1607 KEGG:ns NR:ns ## COG: MJ1607 COG0438 # Protein_GI_number: 15669803 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Methanococcus jannaschii # 3 172 166 323 390 61 27.0 1e-09 MRIYKVEPARIQNIAVGYNAERFCLPRENTVFRGGIERRKELILPSGEKLQKEHSTDLLF AGKLGEKKGVFSLLRAVEMLYKENRNIRLFLAGDNGNTEEKEAVHALGKKCSYPLYFLGR LEQEELVKYYQFSDVFTLPSFFDAVPLTALEALACGNKAVLSGLDGLEEFFRENCPDAPV FFAELPEMLNQDEMREEDQTLFEKRLKEVIQTAILYDYSKMASFSHLSWLSICKKIIVKD >gi|333758476|gb|AFIH01000001.1| GENE 1565 1554944 - 1555474 342 176 aa, chain - ## HITS:1 COG:no KEGG:Ccur_11380 NR:ns ## KEGG: Ccur_11380 # Name: not_defined # Def: glycosyltransferase # Organism: C.curtum # Pathway: not_defined # 1 173 1 173 480 176 47.0 3e-43 MKILSILAQKPSSTGSGIFLTELLKNFQKMGEKQAVLYGIAKEDKLPEFTDVESYPVYYE SEDLPFAVLGMSDEMPYKSTRYRDMTPEMLMQFKEAFLKKAKEAVEHFQPDIILCHHLYL LTAIIREAFPSIPVYGFCHNTDLRQMEKHDLMRDFIKENIQRLDRIYTPKDAQKKR >gi|333758476|gb|AFIH01000001.1| GENE 1566 1555422 - 1555592 60 56 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPDPVLLGFWAKILSIFMDSSFLYFFHNVTLTKAKYRFSCNIDMKRNTVWIAHVIS >gi|333758476|gb|AFIH01000001.1| GENE 1567 1555568 - 1555765 69 65 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDSTRYLLDKEKAARKRTASITVNLPGYLAKVCENRTHLGRSTRPTLVLKTRRLTRYLST SKANG >gi|333758476|gb|AFIH01000001.1| GENE 1568 1555808 - 1556044 150 78 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_3157 NR:ns ## KEGG: EUBREC_3157 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 2 76 7 81 84 69 44.0 5e-11 MREKKLQFLLSFKNTVDALEMEQIGQKRNLPGRLIPLPSVISAGCGLAWTTEPENREITL SVIKEEGLEPASMHEIMF >gi|333758476|gb|AFIH01000001.1| GENE 1569 1556044 - 1556628 669 194 aa, chain - ## HITS:1 COG:no KEGG:TepRe1_0427 NR:ns ## KEGG: TepRe1_0427 # Name: not_defined # Def: selenium metabolism protein YedF # Organism: Tepidanaerobacter_Re1 # Pathway: not_defined # 1 193 1 205 206 166 42.0 5e-40 MNKKLNCMGMACPLPVVEAKKAIDAMEEDGILEVEVDNQTCVENLRRLAGKYDFTVASES LSDNHFLVKMEVKKEHALKGKDEGTCTVVFSSDKMGEGEEELGKTLIKSFVFALSNVDPL PTAMVFYNRGAFLTSEDSPVLADLKNLEKAGVKIMTCGLCADYYKIKEKLGVGIISNMYE IVETQMQSQKIIKP >gi|333758476|gb|AFIH01000001.1| GENE 1570 1556759 - 1557898 864 379 aa, chain - ## HITS:1 COG:CAC2354 KEGG:ns NR:ns ## COG: CAC2354 COG0520 # Protein_GI_number: 15895621 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine lyase # Organism: Clostridium acetobutylicum # 1 372 1 371 379 287 41.0 3e-77 MIYLDNAATSQKKPQAVYDAVLYAMGHMGNAGRATHAASHGSSKTVFDTRALLTKFFHGD KISNCIFTKNSTESLNIAIQGSLKAGDHVITTVMEHNSVLRPLYAMEKRGVELSFLQYTE EQGLDYDSLDSLLQKNTKALVCTHASNLTGDMVDLERMGEFAKKHGLLFIVDASQTAGVY EIDCTKWGISVLCFTGHKSLLGPQGTGGMIIASGVDIAPLSFGGTGVETYNPDMPLENPN HLEAGTLNGHGIAGLHAGVEYILETGIDKIRSIELDLMERMYTGIVHLPGIRIYGNFKTG KRCPILNLNLYDYDSAVVSDELFTRFSIATRSGGHCAPLMHEALKNVNQGSVRFSFSHFN TKEEVDQTIEALRILSEEG >gi|333758476|gb|AFIH01000001.1| GENE 1571 1557895 - 1558941 791 348 aa, chain - ## HITS:1 COG:AGl887 KEGG:ns NR:ns ## COG: AGl887 COG3842 # Protein_GI_number: 15890559 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport systems, ATPase components # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 21 286 8 268 341 245 49.0 9e-65 MSRNEIPASQYTKAIGNIVANMDGISFRYGKKEPYVLENFSLSIEEGEIFCLLGESGCGK TTCLQILGGFIFPERGKVTIAGVDYSRIPPEKRPVATVFQSYALFPHFSVMENVVYGLKQ KGMRKKTREDLGEQYLSLVGLSGYESRNVTELSGGQQQRVALARSLAIEPKLLLLDEPLS NLDAGLRQKIREELKILQKKLGISMLFVTHDQEEAMGLANRIGIMQEGKILQIGSGEELY RRPVSEYVRDFFGESNRISYRGRDYVLRPEEIGMENEKASIPSLSGELGKEENKIILEAT VLTVQYLAILKQYYVEWEGQRIKVKISSRAPFEEGERVKLFFHRLEES >gi|333758476|gb|AFIH01000001.1| GENE 1572 1558959 - 1560644 787 561 aa, chain - ## HITS:1 COG:SMb20364 KEGG:ns NR:ns ## COG: SMb20364 COG1178 # Protein_GI_number: 16264098 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+ transport system, permease component # Organism: Sinorhizobium meliloti # 29 560 95 664 681 187 25.0 7e-47 MAFLHRKRVDLSTLFSKDKHSDFHTKEYGNPFFWIFVFLLCFPLALFIVYPTLLLFIQAF QGENSFAVFSDVLQRYRLAFWNSIESSFFSAFLSTIFAFFLAYGILQLKSNIQRICLIIL SISLVSPPFISSLSFISLYGRRGLISYRLLKLSLDPYNKYGVIGMQSLHFTCLNILFFIH ALRAMDGKLFYSARDLGAGPLSIVKDIVLPLLKPAFLASFFISFLRALADFGTPVIIGGR YSTLASEIYLQLIGYSDFQKTAMMNILLLFPALFSFYFYRRAMEQSNKWNGEQKGRIRPD FPANFLIRTVLSILLCLFFLFECLQYLSIFLYGFLRFDQGEVHFTLENMGELFQYNLSTM YLTLALSVITGFFGSFFSFVLAYIVERKLPFGKKTIDFVLSLPYLLPGTCFGLAYILAFN KAPFRLTGTVWIILFSLIFRQMPLGSRMASAAISSLPKNMERAGRDLGANPIRVFLDILF PILLPSFLSSVYNQFTQSLTTMGAVIFLISAKYKVLVYTLFDAINRGSYNVASLISGIMI LLSLAFYLLLEGCRFLAKNRY >gi|333758476|gb|AFIH01000001.1| GENE 1573 1560648 - 1561766 314 372 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167854980|ref|ZP_02477755.1| 50S ribosomal protein L13 [Haemophilus parasuis 29755] # 76 362 46 338 346 125 28 8e-27 MKKRLVLTTAAILSLGLLASCGGKKAEETTAKAETTAAATEKAGETTAAATEAEKAKSDL GGELNIVATSEDYKKLFDKFTEETGIKTNLLSKSSGDVLSQLKAEGGTPSADVWFGGGID AFMSAKDNGLLEKIDLDSANDFATGYVDPDHYWYTKGVTVVGFIVNDELLKSKNAEAPKT WDDLTNASYKDEVLMSNPAVSGTNYGVVNAMLQKKGEEEGWKYFTALNENVKYYSKRGGD PREKTAQGEVAIGITPMDKKTEKLATEKNCSLVYPEDGIPYVPEGVAVFKGASNVEQAKE FLNWLYNSEDNLKELAEIDGKNTIKVVLPKLSNVELSFDTAKLMKEDLSLFGSQRDSILQ KWETLAGSKNEA >gi|333758476|gb|AFIH01000001.1| GENE 1574 1561890 - 1562822 515 310 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts [Haemophilus influenzae R2866] # 1 306 1 276 283 202 42 4e-50 MAEITAALVKELRDITGAGMMACKKALTATDGDMDKAVDYLREQGLAGAEKKAGRIAAEG VSFTKLSADGKSGVVVEVNSETDFVAKNEKFRTFVDEVAAQALTSNAKDIESFLAEKWAL DPSKTVSEQLSATISVIGENMNIRRFEKLEEQKGLVQDYVHSGGRIGVLLQVKSSVVNDA IKEMAKNVAMQIAALNPKYITRAEVDQDYLKNEKEILLVAAKNEKPNAPEKVLLGMVEGR LNKELKEVCLVDQVYVRAEDGKQTVGQYVESIAKQAGAELSLVRFVRFETGEGLEKKNED FAAEVAAQMK >gi|333758476|gb|AFIH01000001.1| GENE 1575 1562931 - 1563677 1228 248 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227872261|ref|ZP_03990620.1| ribosomal protein S2 [Oribacterium sinus F0268] # 1 246 1 246 247 477 96 1e-133 MSAIGMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIHIIDLQKTVKLVDDAYNALSQI VANGGTVLFVGTKKQAQDAVKAEALRCGEFYVNERWLGGMLTNFKTIRSRIQRLKDIEKM AEDGTFDVLPKKEVTLLKKEWAKLEANLGGIKDMKRTPDAIFVIDPKKEKICIQEAHSLG ITLFGIADTNADPEELDYIIPGNDDAIRAIKLIVAKMADAVIEAKQGDMTEEEAALASSE ENFSEEEA >gi|333758476|gb|AFIH01000001.1| GENE 1576 1563891 - 1565900 1481 669 aa, chain - ## HITS:1 COG:CAC1785_1 KEGG:ns NR:ns ## COG: CAC1785_1 COG0550 # Protein_GI_number: 15895061 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Clostridium acetobutylicum # 1 577 1 577 578 569 54.0 1e-162 MADNLIIVESPAKVKTISKFLGKSYTIDATMGHLIDMPKSSLGVDVENHYEPKYITIRGK GDLLSKLKKEAKKADKIYLATDPDREGEAISWHLQNELLKDEKNKKKISRISFNEITKNA VKNALKNPREIDMNLVNAQQARRVMDRLVGYTISPLLWQKIRKGLSAGRVQSVALKMICD REAEIAAFVPEEYWTLEAAFSVGKKTLEASFYGKEKRIPLDKEETVSAIIKEIGKSKLTV VEKKQGERRKKAPLPFTTSTLQQEAAKLLSFPTQKTMRIAQKLYEGVNVKGRGVVGLITY LRTDSTRISDEAQQAVLEKIRTEYGEDYCQKKNREEKTDVKIQDAHEAIRPSYLEITPFE AKDSLEKDEYKLYQLIYKRFVASRMESAVYQTETIMLSAKDYIFTLSGSKLLFDGFLAVY MSEEDKAEKNVMLPAMEVGDSFSVKEWIKEQHFTQPPAHFTEASLVKALEEGGIGRPSTY APTIATLLLRRYVTKEKKNIFVTELGNAVNEMMSQNFPTIVDKAFTANLESLLDSVSVGD TQWKTIIENFYPDLSTAVEKAREEVSKVDIKEEETDVICDKCGRKMVLKYGPHGKFLACP GFPECKNTKPYVEYAGFLCPTCGAECVKKRSKKGRIFYSCSRYPECEYMTWQKPKDAVSG EKKEGEIMA >gi|333758476|gb|AFIH01000001.1| GENE 1577 1565899 - 1566030 109 43 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKSLSSYSVPFSYKNVDNINDEEKNCKAKMLFLTNFYGNRCFL >gi|333758476|gb|AFIH01000001.1| GENE 1578 1565996 - 1566844 759 282 aa, chain - ## HITS:1 COG:TM0250 KEGG:ns NR:ns ## COG: TM0250 COG0758 # Protein_GI_number: 15643022 # Func_class: L Replication, recombination and repair; U Intracellular trafficking, secretion, and vesicular transport # Function: Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake # Organism: Thermotoga maritima # 8 277 69 333 337 203 43.0 3e-52 MREILAMEDGFPERLREIPDSPKCIYLIGSLPEKKEPTVGIIGARNGTEYGKKVALSLAR ELVAYGIGIVSGMAYGIDSAAHRGALEGGGKTYAVLGSGADVCYPAVNQKLYEEIAKTGG IISEYAPGAPPLPHHFVERNRLIAGLSDVLIVVEARERSGTFITVDRALEQGKQVFAVPG RISDALSKGCNKLLMEGAGICLSQEDILHCFSIEAGEKKQAEIHLNEEENRVYQALRLDG KHIDCLAKELKMSVEKLYPILIGLELSGYCESKGNTYSRRSL >gi|333758476|gb|AFIH01000001.1| GENE 1579 1566855 - 1568480 1142 541 aa, chain - ## HITS:1 COG:alr4088 KEGG:ns NR:ns ## COG: alr4088 COG0606 # Protein_GI_number: 17231580 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATPase with chaperone activity # Organism: Nostoc sp. PCC 7120 # 1 537 1 506 509 342 36.0 1e-93 MLANVYSAGLIGLNACLFSVQVDECNGLPRSIIVGNVSPSVREGLERAIIALKNNGFELP PKKITINIQPADVRKNGTSFDFAILAGMFIATNVKEYPYHNYAFLGELGLDGEIKHIPGV LPMTLAMEEAGIEGVFVGKEDEKEALHCKKLKIIALSSVREWIKILYPFLIKKPSLNSLE MKLKGRRKIEVKKPCISQNQTKKICMGFPPSAKDNKVQKEIADFSDIAGQEAGIRACVIA ASGMHAMLFSGPAGSGKSMLARRIPGILPKLSEEEKLEVSKIYSIAGDLSGEEGLLQERP FRAPHTAISQNTLLGGMIGGNLVPGELALATKGVLFLDELPLFRKETIEALRSPLEEKEV VLHRLHQVFSYKVDCILVAAMNPCPCGFFPDRNRCHCTPGQIRAYQRGISKPILERIDIS LELPPVPLENALGKEKKFSSEELSKQVIEARRRQKERFKAEDYIDWNSQMGPTELEKYCF LGKKEEDFMKKVFALKNLSMRTYHKVLKVARTIADVEGKENITIEHLAEAVSYRIVEENL Y >gi|333758476|gb|AFIH01000001.1| GENE 1580 1568449 - 1568667 57 72 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRPAEYTFANIAASLFMNWKLLKLKIELKKLFKSLELESFKTKKKQVYNSLCAKILYSEF FLNGLIQKSRFF >gi|333758476|gb|AFIH01000001.1| GENE 1581 1569190 - 1569954 596 254 aa, chain + ## HITS:1 COG:SMc01204 KEGG:ns NR:ns ## COG: SMc01204 COG0300 # Protein_GI_number: 15965341 # Func_class: R General function prediction only # Function: Short-chain dehydrogenases of various substrate specificities # Organism: Sinorhizobium meliloti # 5 254 12 262 294 113 32.0 3e-25 MNVAVINGASSGIGRELCLLLQDRIPAIQEFWFFSRNKSALDELSHLFFRKVKIFPYDLT KKESLSQYKETLRKENPKILFLVNAAGFGKLGEACSLSSEEQLNMIDLNIKALTAFTLYS LPYMRRKSRIIQFASAAAFLPQREFSVYAATKAYVYSFSLSLREELKHKEIGVTTVCPGP VDTAFFSVAGNESKLKAIKSFFMANPKKVAKTALVDSVLDRPLSIYGFPMKVFYVLSQII PDEFLLLLLRKLYR >gi|333758476|gb|AFIH01000001.1| GENE 1582 1569958 - 1570953 458 331 aa, chain + ## HITS:1 COG:CAC1015 KEGG:ns NR:ns ## COG: CAC1015 COG0564 # Protein_GI_number: 15894302 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthases, 23S RNA-specific # Organism: Clostridium acetobutylicum # 3 326 2 315 318 155 31.0 1e-37 MREILVSENEKEQKLLKLLQKFFKGQNDAFLYKMLRKKNILLNGKKANGKELLSSGDKVQ LYFSEESLQKLCSLPKVEEGIWSDFYKKFIVYEDPNLIIFNKPAGLLSENDAKSTLSVNS LLSSYLLEKGEQSSETRETFRPGIANRLDRNTSGLILFGKTLAASQNLGKLIQEHKIQKR YQALVVGDFQEDGLQESFIRKNAKINKVIQVQEGEGEHIRAIFSTIQKYRDREQLFSLLS VQLITGKTHQIRSQLAFLEHPILGDEKYGEQEINREYRKKGVHRQLLHAYSLSFPEIQEN NALYPLSGKNFEIPLPDDFQNLIRNLKFQTR >gi|333758476|gb|AFIH01000001.1| GENE 1583 1571043 - 1572572 927 509 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|291459172|ref|ZP_06598562.1| ## NR: gi|291459172|ref|ZP_06598562.1| hypothetical protein GCWU000341_01333 [Oribacterium sp. oral taxon 078 str. F0262] hypothetical protein GCWU000341_01333 [Oribacterium sp. oral taxon 078 str. F0262] # 1 451 1 411 493 254 47.0 1e-65 MIILIDFENTHASGFQGVEYLDEKDTLVVYYSDENSAVSKGLVEDLRQKNVHVRMVKLLK QHSNALDMYIASTTGMFLDTGEKICIVSKDRGYAAVRDFWHSLRGAEILLGETIEECFLN SVANDDERIRRAKDRSQKALLTESFETMNNIPTRPTLSRSNYWRRKKQINYDLSKHLAPV EILPNPLAKPEQENGYSVEETELVDLVEEIKEELALKRNREEEDSLILESTPDAVSDGSE AIKEEMKEEGHIEDKTESIPEIKHESFRNDNPQLMRREMKKNDNQVRFVYDPVKKAMMKV EETEPLASSEEREENHSPVSNLELSGEHVESARTHPEDVHEEHKKRNNRRRGGRKKETEK KLSISGEKEEEKKDKQVKTAPKDEVKESVAAKKNIEKEEQVSEGKKDAVKEKRSQTSKKD MEKEKKPASTKRGRKKVTKTVSLKQESEEKQTSTTTENRAKQEEKAEGNQENTVKRSRRR NNTQKSKKKEEGLNVQESTSAEPVDKSKE >gi|333758476|gb|AFIH01000001.1| GENE 1584 1572597 - 1573733 822 378 aa, chain - ## HITS:1 COG:no KEGG:LSL_1296 NR:ns ## KEGG: LSL_1296 # Name: not_defined # Def: hypothetical protein # Organism: L.salivarius # Pathway: not_defined # 139 360 124 347 347 81 30.0 5e-14 MLEYLNLKLDGLGVGESSLNIWMKNGRLRYSYDVEQEDGPAMILNVSRERASYFLKNLEN LNLYRWKEQYFGEKKEKRREISALSSRWYLLYKEVDKEAREFQGLNDFPKEWESLMSLIA DLTVDMDCLRFNELSAFSLDVRDCREQILWNPLSKEENSVEVEYQEFLQISRTNKKLIYQ QYINNIFTVKHEYNIPNIVDYLLGNIERYFSTFSEKEQEDAGEASSKVIISLYFQNGTKR VLRRTYDRYGLPDDWDDFLDDFRKTLAYHGVFGILFDSGLYHHGVKEEEYIYLSCIFEPN GKTYYYRSKEDNLSIGDFVLVPSTKQENAETVVMISEIMYCKKEDVPYPLEKTKFIVRKI DDGGFYNFLSQNNPDEEA >gi|333758476|gb|AFIH01000001.1| GENE 1585 1574114 - 1574581 473 155 aa, chain - ## HITS:1 COG:CAC3292 KEGG:ns NR:ns ## COG: CAC3292 COG0822 # Protein_GI_number: 15896537 # Func_class: C Energy production and conversion # Function: NifU homolog involved in Fe-S cluster formation # Organism: Clostridium acetobutylicum # 1 141 1 141 143 128 52.0 5e-30 MANNTYYNEILTEHNIRPLHKYKMEGADFSLEGVNPSCGDDIVLYLKLDQDEKIVEASFD GDGCAISQASSDIMCDLIIGKKKDEALRLSEIFLRMIRGKITEEEKEELEEAGILEDISH MPARVKCAVLAWRTMDEIFQDATEGKIDKYSGKFD >gi|333758476|gb|AFIH01000001.1| GENE 1586 1574571 - 1575299 680 242 aa, chain - ## HITS:1 COG:CAC3291 KEGG:ns NR:ns ## COG: CAC3291 COG0520 # Protein_GI_number: 15896536 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine lyase # Organism: Clostridium acetobutylicum # 1 241 167 407 408 276 52.0 3e-74 MAEVSNVLGNRQDIETFVKLTHEKNAIFVCDGAQSVPHRKVDVQEMDVDFLAFSGHKVYG PMGIGAVYGKKELLEKMPPFLFGGEMIEYVTKEDATWAELPHKFEAGTVNVGGAVGLAAA IHYVEKLGFSFIEEREKELSVYLMEGMREIPHVHILGSEKGENHHGIMTFTVDGVHPHDI AEIMDSHKVCIRAGHHCAQPLMKFLGTPSTSRVSLGLYNTKEDVDAFLAALKTIRGAMGY GE >gi|333758476|gb|AFIH01000001.1| GENE 1587 1575323 - 1575688 308 121 aa, chain - ## HITS:1 COG:CAC3291 KEGG:ns NR:ns ## COG: CAC3291 COG0520 # Protein_GI_number: 15896536 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine lyase # Organism: Clostridium acetobutylicum # 1 99 37 135 408 129 60.0 1e-30 MEAMKQYYETENANPLRGLYELSLKATEAYERARVSVQKFLNAKSPEEIIFVRNASEGLN LVAQSYGRAFLKEGDEVLITIMEHHSNLIPWQQVAKEKGLSSPSWSRMKRGSLHWKALNR H >gi|333758476|gb|AFIH01000001.1| GENE 1588 1575801 - 1576859 1048 352 aa, chain - ## HITS:1 COG:CAC3290 KEGG:ns NR:ns ## COG: CAC3290 COG0719 # Protein_GI_number: 15896535 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, permease component # Organism: Clostridium acetobutylicum # 8 345 8 360 366 141 29.0 2e-33 MKENQFIINKMPVPTFRWLKMNEAKLEIPGELTAYQPSVEGKLPEKLKEESDFSGSMSTA LDDYFREERLPVQSFVLREGEESSDYIRMHFQNGENAVEHSAYCFTVEEGARLKLFLAIE SMEESKNMAFLQEKFLLKKNAKLDLVVAVKNAKDFAHLQDFSFVLEEKAKLKLTSLLLSG KSHHISYQIDLNGDKSEAELHLDYVLSQKEKADFNLVVNHRGKKTISNIVADGVLREDAV KIFRGTIDLKHGAKGASGTEQENVLLMDDSVVNQTIPVILCDEDDVEGNHGASIGRLDEE SLFYMQSRGLSLEAAYELVAEARMENAIHSIMDKRVEEYIEEELRGMRSEEE >gi|333758476|gb|AFIH01000001.1| GENE 1589 1576873 - 1578288 1604 471 aa, chain - ## HITS:1 COG:CAC3289 KEGG:ns NR:ns ## COG: CAC3289 COG0719 # Protein_GI_number: 15896534 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, permease component # Organism: Clostridium acetobutylicum # 1 468 1 465 466 660 66.0 0 MAKDRAIVEDIDRSLYDFRYEEKEGEFYKIKEGLTEDIVLEISEKKNDPKWMRDFRLKSL EIYHKSEMPNWGPDISGLNVDNIVTYVKPNTEMSQTWEEVPEDIKNTFEKLGIPEAERKS LAGVGAQYDSELVYHNLQEEVARQGVIYTDIESALHGPYGTMIEEHFMKLVPPTDHKFAA LHGAVWSGGSFVYVPKGVNVEIPLQSYFRLNAKGAGQFEHTLIIVDEGAQLHFIEGCSAP KYNVANLHAGCVELFVGKNAKLRYSTIENWSKNMYNLNTKRAKVEENGIMEWVSGSFGSH VSYLYPMTILKGDNARSQFTGVTFAGKGQNLDTGAKMVHIGKDTSSFINTRSISKGGGIS TYRSAVVIQNQAKNAKSAVSCQSLMLDDESRSDTVPAIDVRTNKADVGHEAKIGRISDDA VFYLMSRGISEEEAKSLIVSGFADSVSKELPLEYAVEMNNLIRLEMVGAIG >gi|333758476|gb|AFIH01000001.1| GENE 1590 1578292 - 1579035 176 247 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 1 241 1 232 311 72 25 8e-11 MADLLDVKNLSVSVEEKAILDAINLTINKGETHVLMGPNGAGKSTLGNAIMGNPRYTITG GNLFFNGENITAEPVDKRAKRGIFLSFQNPLEVPGVSLGNFIRSAMEQRFGKRIRLWDFR KELKASMDILGMDHSYAERDLNVGFSGGEKKKAEILQLLMLKPELAILDETDSGLDVDAV RTVSEGVKAYQKNMDGALLIITHSTRILEALNVDKTHVIINGKMKATGDGSLVNKINDEG FESFLEG >gi|333758476|gb|AFIH01000001.1| GENE 1591 1579432 - 1579788 250 118 aa, chain - ## HITS:1 COG:PAB0185 KEGG:ns NR:ns ## COG: PAB0185 COG3862 # Protein_GI_number: 14520489 # Func_class: S Function unknown # Function: Uncharacterized protein with conserved CXXC pairs # Organism: Pyrococcus abyssi # 1 102 1 103 115 68 38.0 3e-12 MQVTNTTCTVCRRNCFISVEHDDHEVFAVYGNSCHRGKEAAIEEALAKEKKFLGEIRIIG EKELLPVRTEGMIPKEKFAEAEEFCKNFRIPKPIRIGDILVENFLNTGVHLIALKTVS >gi|333758476|gb|AFIH01000001.1| GENE 1592 1579806 - 1581308 1108 500 aa, chain - ## HITS:1 COG:ECs4851 KEGG:ns NR:ns ## COG: ECs4851 COG0554 # Protein_GI_number: 15834105 # Func_class: C Energy production and conversion # Function: Glycerol kinase # Organism: Escherichia coli O157:H7 # 2 491 7 495 502 608 58.0 1e-174 MILALDAGTTSTRAILFNEEGQSVAAAQKEFPQYYPKAGYVEHHGNEIWQAQLAAAREAV EKSGVDSSEIKAIGITNQRETTLVWDRETGLPIYPAIVWQCRRTTEMIEKMTKENPSVIQ LIKEKTGLVFDPYFSATKLSWILNHVKGARERAEKGELCFGTVDTWLIFNLSKGKCFATD YSNASRTLLFNIHSLEWDAELCKLFRIPKCMLPEVRPSSSFFGETDEEYFGRKIPICGVA GDQQAALFGQCCFQKGDVKNTYGTGCFMLMNTGEDCVPSHHGLLSTIAWGINDKVYYALE GSVYVAGAVIQWLRDELHLLDDSRDSEYFATKVEDTHGCYIVPAFTGLGAPYWDPEARGS ITGLTRGVNKNHIIRAALESIAFQSRDLLNAMEQDTGQRLRSLRVDGGASGNNFLMQFQA DIMQASVIRPSCVETTALGAAYLAGLYCGFYPSMKSLEERHHVEMEFFPKILREEREKKL LEWKNALKASLTGINGNRLG >gi|333758476|gb|AFIH01000001.1| GENE 1593 1581325 - 1582398 706 357 aa, chain - ## HITS:1 COG:TM1400 KEGG:ns NR:ns ## COG: TM1400 COG0075 # Protein_GI_number: 15644152 # Func_class: E Amino acid transport and metabolism # Function: Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase # Organism: Thermotoga maritima # 7 349 14 354 384 163 30.0 6e-40 MINFTVGPVMTSEEILSIGAEQLPYFRTTDFSEIMLENEKYILKYSKAGRNARAVFMTCS STGSMEAVIMNCFTKRDKLLVINGGSFGQRFVDLCEIHEIPYVSIALEYGKKLRKEKLYE YDGQDFTGLLVNVDETSTGVLYDVEMLGEFCEKNHLFFVCDCVSSFLADSFDMDKVKADI MITGSQKVLACPPGISIIVFSEKAVERVNCLKTKSMYFNLKSMLKDQERGQTSFTPAVGI LLQINARLKEIERLGGVDKEVERVALQAKDFREKIKGLPFMLISESPANAVTPLHPLSAN AYEIFLRLKEEYGIWVCPNGGELRDYLFRVGHIGALSHEDNSTLVKAFQDLKLRGLL >gi|333758476|gb|AFIH01000001.1| GENE 1594 1582395 - 1583051 246 218 aa, chain - ## HITS:1 COG:CAC3242 KEGG:ns NR:ns ## COG: CAC3242 COG1313 # Protein_GI_number: 15896487 # Func_class: R General function prediction only # Function: Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins # Organism: Clostridium acetobutylicum # 2 209 89 297 298 194 42.0 1e-49 MEVFYQLEAEGCHNINFVTPEHYSPGVREAMLLARKKDFSLPFVWNSSGYQSARTLKALE GLVDIYLMDFKYWEGSLAERYSKAKNYPEIAKEALEEVVRQCPELYYRDGLLKKGVILRH LLLPGQVYQGKRILKYSFCRYGNHILYSLLSQYTPFGALDCFPEINRKVFGKEYQRLVDY ALSLGIEKAFIQEGESAKESFIPDFCVQNLAFKENKTK >gi|333758476|gb|AFIH01000001.1| GENE 1595 1583452 - 1583583 203 43 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227872650|ref|ZP_03990980.1| ## NR: gi|227872650|ref|ZP_03990980.1| peptidylprolyl isomerase [Oribacterium sinus F0268] peptidylprolyl isomerase [Oribacterium sinus F0268] # 1 40 1 40 161 77 90.0 2e-13 MANPIVRITMDSGKTIRLELYPEIAPVTVENFLDLVKKAFITA >gi|333758476|gb|AFIH01000001.1| GENE 1596 1583730 - 1583936 301 68 aa, chain + ## HITS:1 COG:CAC2769 KEGG:ns NR:ns ## COG: CAC2769 COG0652 # Protein_GI_number: 15896024 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family # Organism: Clostridium acetobutylicum # 1 67 94 160 174 76 56.0 1e-14 MARAFDPNSAGSQFFIMHEDAPHLDGEYAAFGKVIEGLDTVDEIASVETGFQDAPVNKVI MEKVEIEE >gi|333758476|gb|AFIH01000001.1| GENE 1597 1584397 - 1588233 3426 1278 aa, chain - ## HITS:1 COG:BS_addA KEGG:ns NR:ns ## COG: BS_addA COG1074 # Protein_GI_number: 16078127 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) # Organism: Bacillus subtilis # 2 1260 9 1224 1232 526 30.0 1e-148 MSKWTKEQSEVISHRKGNLLVSAAAGSGKTAVLVEHVIDRLLDKEHPISLSSVVLMTFTE AAASEMKERIKARLKEAFLENRDPHIEREIAELPNANISTIDAFCKRLIEENYTSLGIEP NFRIGEKNELALLKEDIVEELLEEEYGKKEESFLSFVDRYSTGKQDKGIQEIILKLYYLA IASPFPEKYLKTLSENSSSAWKNYLLASIRKRVEEAIETLREAIRICSEEGGPSEYLVTV EEDYQSLLRVKAIRSSQKENTEEILERKESESGGEAAKLLEKAEEILEKSEEAGAILRRT IEEIQTISFSRIKNSRAERKEEVKGRRNAVKALVQKWQKNYILIPEEIEEKAETEGKTLL QEAIRLTLLFHARYQKEKLERNILDFSDLEHFALKLLYTEKDGVLHFSTLADELAQEYTE ILVDEYQDSNMVQEYLVSALSKERFSEGNVFQVGDVKQSIYRFRMARPELFLRKYYDESY PKIFLQKNFRSLKGVIDAVNACFFRIMKKELGGIEYDRDSSLFQGREEKEDTDSQTEFLL LEKEENKPEKKKGEQTEEEKAKGKKEEKQGEKGGEAGLEKETDLQLECRMIASRVKELHK KNIQYKDMVILLRSPKKVAKEMVDIFSEEGIPSFAVSSDGYYSQVEVETVLAMLSIIDNP KQDIPLAAVLHSAMFHFTDEELCSLKIAYGSLSEALCISLEAIADGNIGSENVCSGNKHN ETISGENICSEKENPLQVQAPLDQALYEKWKDFCTKLERYRRLSRNLRVHELLTLLYEET SYYLYVSALPMGEKRRANLDQLIEDALQFEKGSFSGLFYFIRYIEKAKQKEYDEGEANIY SEKDDLLRIMSIHQSKGLQFKVVFLSSIQKNFNKQDLRESILLDEELGMASNYLDQETRI QYPSLQLSAIKEKMEEENQAEELRLLYVAMTRAEEKLVMTGVIKNLASYLEKHPLNEDIK TEEIRGANSYLDFIMLAFSRSFTESLENPLVKLRTFTREALSEKKEEEEGEKFSFKDALY SYLAENHEKTVEEEEWDKDFSYRYPHEESTHLYPKYAVSLLKKQAIEAVKEQGDKEGETG GESEGLSEAEKSGKNRQVYERNTEKREKGLGAKIGDSFHHALALFDYTKGPEQLPSILGE EELSLLNKEQFQTFLSSSLGECFKKAYQEKRLFREKHFMRALPYHSLFPERVEEDEVLLQ GIIDAFIVEDDGIILVDYKTDRVREGEELRERYQKQIMLYSDALEAILGKKVKRRVLYSF YLGEEVEILPREDMVRIL >gi|333758476|gb|AFIH01000001.1| GENE 1598 1588226 - 1591954 2584 1242 aa, chain - ## HITS:1 COG:BS_addB KEGG:ns NR:ns ## COG: BS_addB COG3857 # Protein_GI_number: 16078126 # Func_class: L Replication, recombination and repair # Function: ATP-dependent nuclease, subunit B # Organism: Bacillus subtilis # 5 1227 4 1162 1166 350 25.0 1e-95 MSTLQFVFGASGSGKTEFCVRKALEEAEKDLNHNVYYLVPEQDTLAMQKRIVMHENNKGK GIINLDVLSFQRLYYASFSHRNKTVPKALDEMGKVMVLSLVAEKYNRNLLYFQGEIDKPG FLEEAKSLISECMQYGISPENLSNCALKSVKKLTGAKLHDMALLYAGFLNWLLEHGKYTE EGIQDLALEQVLQDPNYKNATFLLDGFTGFTVSELRCLEILMEGENNILISLEIRSREEG NLYEKGDMSSLFYLTKDAVKEVEELALKLNVKVLPAINVNLYDSISGERRKEGEVYPRFE KIPALQKICDDYAYGKAEVERACRGQEKRDVKSFEKTEQEEKQKEKQIRPFGITLRECPN ILREVEEAAVEIRALVKDEGYRYRDIAVIVPDPESYRDILFRKWKDLEIPFFLEEDIKLM DSPYGKVLRSALLVLEKGFLFDTVFRYLRAFPYRGAGEEELVDRWENIARERGLKGLPAF SSLLKPEEDETEEEKNGEKNSDLQPGARNKEGNILEKPKKNAEDYLAHRDLACLIAFYER NRKSAEKKGEKEQSEEKQEGETQQKEENKEKGLVLKDRIDSLSELLEKTDLENRLLESLS FLSEEGMENREESFEKSIGIILEMMEKMRESLGEISISKKSFGKLFDLAFSLEKLRQIPA TLDQVVVGDLRRSRFHNPKAFLFLGLSSEFLPKGMGKKIIFTEKEREFLRESGYRLSPLS WEESYIEKYYVYKAFLTPKERLYLSYPRAVRNGKSGKASPYLKELFPLFSDLKIIYSERQ KLPIYNGKRALEELVEELPKKCTGKSLYLQKEEIVHRFKTESFRLLHYLWNREEYREEVK KILKGIFFENTEERITKEMSLALYGEILKGSVSRMEIFYSCPYAHFLQCGLNLKDRKTSE VQAFTIGNLYHRMLELFFRKLMRRKDMEEAFGEKLEEILNEVLEELWQDPEFSLFLSGGR NEYLRMKLQKNGRRILWALGKQLLGGDFRPKAVEEEFKMEEEGLQLRGRIDRVDEYLSED RKTLFLKVIDYKSGKKAFSLKNLFAGLDLQLPLYMDYVLQREKEKNSNREVLPSALFYFT MENPVIPYDKDSDPDKERLKAFKPSGLVNFSEESLSHLEKREGESLLLPVQCKNGEVEEK GAAVSSEKLEALLAFARKEMLEGAKRIKEGEKGISPIRKEGDITSCSYCPYHSICGFDED LPNFRYRSPDSRTDEELWEEILKKTKGETEEDIETRKEDGDE >gi|333758476|gb|AFIH01000001.1| GENE 1599 1592048 - 1592986 696 312 aa, chain - ## HITS:1 COG:Cj0340 KEGG:ns NR:ns ## COG: Cj0340 COG1957 # Protein_GI_number: 15791708 # Func_class: F Nucleotide transport and metabolism # Function: Inosine-uridine nucleoside N-ribohydrolase # Organism: Campylobacter jejuni # 25 246 2 252 335 71 25.0 2e-12 METEKIETEKTEMQNSARQNENKRKIIFDCDNTMGIPGCDMDDGLCLLYLLGREDIELLA VSASFGNNRTKVVYENTRTMLRERNREDIPLWLGGLKPEDWDSESSRNLVKLARAYPHEI DLIVTGSLTNIAGAFVLDPEFFSLIKGMYFMGGITAPLIFEKKEMKELNFSVDYKASTLV LQNGENLHIITGNACLAVMTSYSDFKERLENSSLGQYILKKESDWFAYNDREYGIKGFYN WDMTTVLYYFYPELFRKSKKNIYITEENLKRGYLEESLKTGCPEEKDLGRELYFGEIKEK EEVKRKMLEAFA >gi|333758476|gb|AFIH01000001.1| GENE 1600 1592989 - 1593051 84 20 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVLQAEKGVILFSKEELLEE >gi|333758476|gb|AFIH01000001.1| GENE 1601 1593237 - 1594076 309 279 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 234 1 241 245 123 33 3e-26 MLKIENLNVYLEGSPIVKDCSLEIKKGEIFSLLGVSGCGKSTLIKAVLGLIPSSSGSVFL NGRDLTKLPPEKRDCTVVFQDLRLFPHLTVGENIAFPLHFQKKNKTEERKIVEELLSLVS LEGFSKRTIESLSGGQKQRVAIARALAQNAELLLLDEPFSSLDPNLRKEMGELLLHLREK RGLSVLLVTHDHEEALRLSDRIALMKEGEILQCGRGEELFYAPKTVYAAKFMGEANFLPG RVERGEFKMPFFLFLTTIIRAQRSLLLQRTSRTESILFS >gi|333758476|gb|AFIH01000001.1| GENE 1602 1594070 - 1594867 394 265 aa, chain - ## HITS:1 COG:SMc02588 KEGG:ns NR:ns ## COG: SMc02588 COG4135 # Protein_GI_number: 15963822 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Sinorhizobium meliloti # 103 264 398 559 562 78 30.0 1e-14 MLAKKNPAYQLIRILFLFSIVFPFLVLILLSFSERYTWPGILPGNYSLRAIRSILFQRKA LFINCLFSIFFSVMVSLCTIMAAYCTAKWQSEHKESSLLSFCIFLPFMIPSSVFAMGAQI LFLRLPFKNAYFSVFLSHVLYSLPYATTYLTEGMQSQIKRLEEQGRVFGASGFYLLFKVT IPLLFPYLIPAFMMSFILSMSQYILTVLLGGGKLKTLSLIMVPFIQSGERNLASVYGLLF LLSSFLLFLLMEMLLRGLKRREKAC >gi|333758476|gb|AFIH01000001.1| GENE 1603 1594870 - 1595700 505 276 aa, chain - ## HITS:1 COG:AGl602 KEGG:ns NR:ns ## COG: AGl602 COG1176 # Protein_GI_number: 15890418 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component I # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 14 268 26 270 285 95 29.0 1e-19 MKKNFSFLYLLPQLFFTGLFLLALFLGLWDSFTVEGHVSIAHYKEIFTRGDTLPSIFYTL RISFLSSLFTLLLALLCSFLILHFSEKWDSLKSILQLAIIMPHSLVALFLLFFLSQNGFM ARIFYALKLISDQSAFPEFVYDRFGVGVILGYIWKELPFMLFFALPLAYSVDGKLGEAAR TMGASPLYSFFFITLPLSIRQYLAAFFIIFSFSFGSFDLPYLLGNTTERALSVLAYQELQ RGFMNRPTALSYNGIMLLFSLLLSFFYFRFLPKKKG >gi|333758476|gb|AFIH01000001.1| GENE 1604 1595702 - 1597027 1614 441 aa, chain - ## HITS:1 COG:SMc02589 KEGG:ns NR:ns ## COG: SMc02589 COG4134 # Protein_GI_number: 15963823 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, periplasmic component # Organism: Sinorhizobium meliloti # 61 414 21 381 408 203 33.0 4e-52 MKKNVRMISRLTAMAMAGVLALSACGGKKAETSTTTAKAEETKAVGESKAEEKAEEKAKE KAEESGSEAFDKLVEEAKGQTVNFYGWGGDDRLNQWLDGFYAEYLKKNYDITLNRVPMGI EDILTQLSAEKKAGSTESDIDMIWINGENFKTAKENDYLYGPFTAELPNFKEYINQDDPE TKADFSYPINGYEAPYGKAQLVLYGDSKVGEFPKNTAELLEFAKAHPGKITYPALPDFTG SAFVRNVIYDIVGVDQFQTVKEDKEAVRELVKPAMEYLKELAPYLWKEGKTYPESAPTMM NMYSDGELIMGMSYSAYIVANGIQDGSFSPDTKTFLFDKGTIGNTNYIAISKNAKHRAAA EVAINAMMAPEVQLNRYKTLKTIPVLDNAKLSKEVQDEFSKVDLGQGVLPQSELLSKRLP EMPAGLVPIIEEIWQEEVAGK >gi|333758476|gb|AFIH01000001.1| GENE 1605 1597053 - 1597772 648 239 aa, chain - ## HITS:1 COG:ydjZ KEGG:ns NR:ns ## COG: ydjZ COG0398 # Protein_GI_number: 16129706 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 229 4 232 235 216 54.0 2e-56 MSKKSFLRDRILLFLGVIAVVALYFLYAPFRAFLKEVFRVFATGDFQKLKDFVASYGPYA AAISFLLMVLQSVVAPLPAFLITFANAALFGFWKGALLSWSSAMVGAALCFFIARSLGRE AVEKLTSKGALKNIDDFFKRHGKQSILIARLLPFISFDIVSYAAGLSSVSFLGFWVATGL GQLPATLVYSYVGGFLTGGAKLLVTGLLILFALAFLIGLGKQLYTERQKSKEKQNQNIG >gi|333758476|gb|AFIH01000001.1| GENE 1606 1597772 - 1598569 952 265 aa, chain - ## HITS:1 COG:STM1686 KEGG:ns NR:ns ## COG: STM1686 COG0607 # Protein_GI_number: 16765029 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Salmonella typhimurium LT2 # 84 156 24 96 104 68 42.0 2e-11 MKKKSLVLVAFLAMGLSLTACGNGGSTKTETKQETSAASEGSEKSEETKEEKTDSAKAEV KEMKGDAIKKIVEDKKEKENYLIIDVRSPEEYAKGHINFAINMPLDTLKDHLSEIEDWKD KNVILYCNSGKMSGEAADILASNGFTKVFNGEGVKKYSYDLKTFGNIRAKELMEKAKDAL VVDAREAKDFEAGHFATAVNVNSEDPATIDAILPDDKNTLIITHCYSGNRSAKAAEYIAS KGYTNVWNCLDGTKEVEYDFSKGDK >gi|333758476|gb|AFIH01000001.1| GENE 1607 1598728 - 1599789 816 353 aa, chain - ## HITS:1 COG:no KEGG:Closa_1177 NR:ns ## KEGG: Closa_1177 # Name: not_defined # Def: aminoglycoside phosphotransferase # Organism: C.saccharolyticum # Pathway: not_defined # 20 344 11 329 334 270 44.0 9e-71 MHLQKNIETFAKEPDLLERISERAYREALHLPMEVIEEYAFLARGEYNENFVFTHPESGK RYVLRVNHGSQMHLKKQISYEAHALSLLEKSGRVPKVYYVEEKGDKGILLMDFLEGRALR YETDLTLAGQILADIHCTAYEREKDRGELRLLSPENPLYAMLSESASLLRTYALSPFKED SVYERCHALWEKGVNLEEKYAKTLSSKDFCIINTELNSANFLIQNEGKAFPSHLIDWEKP LYAHFAQDLGHFLAPTTSFWKTDCILYEKDRDLFFHAYKEALAGRRNFSGIEEKTELFIL FNCIRGLSWCAYAYADYQKGRDIQNEDTFRKIKEYLTDPFLSSVEELFRESRT >gi|333758476|gb|AFIH01000001.1| GENE 1608 1599755 - 1601353 757 532 aa, chain - ## HITS:1 COG:slr0092 KEGG:ns NR:ns ## COG: slr0092 COG0463 # Protein_GI_number: 16331767 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Synechocystis # 311 494 4 207 257 98 34.0 3e-20 MLTKVNKMSKAPTASPVENKILHAPKALFAKPQTSKQALILFTRLPEAGKTKTRLIPYLQ EKGARDIHLALLQDFAKLYWKLHRKEKEVKLFLFFSSATANEIVEGAFDSGKKESNKEQE GRNEGIAEMKILRKLFPDAEFVPQEGEDIFRKMENAFLYTFQEGYSFSYLVGADIPFLTT DSFYKVFSEGRKGKNALGESLDGGYYGIGLQSKVEKSDLDKIFSPGKKRNGRKENTEQNS TRKPKSAETEKQEVDIFEYTKTALYATGIPLLLLKKRRDIDEKEDIIAYRQLIPYNKALQ SSYIGKEILRQSKISIIIPCYKEGDTLSNMEEQLRPYKKQAEILFADGGENHFSGEYKVV PCPKGRAKQMNSAAKEASGDILFFLHCDSILPKGFLEEIREALRKTPVACFGIRFKPFSP LMTICSFISNHRVYDRKVMFGDQGIFLGRELFFEMGGFPDIPLMEDYQFSLNLKSRGIPM GLCKKRLITSERRFSGSFFHKLSIMWKMNRLRARYRKGEDIDALAKEYRDIR >gi|333758476|gb|AFIH01000001.1| GENE 1609 1601423 - 1602394 552 323 aa, chain - ## HITS:1 COG:AF0867 KEGG:ns NR:ns ## COG: AF0867 COG0247 # Protein_GI_number: 11498473 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Archaeoglobus fulgidus # 43 284 79 311 328 61 24.0 2e-09 MKKEIHKRVEECIHCNACKRKCKFLTKYDICIGDSEKLKALAYHCYLCGECTRICPKGID GRGVILDYRKEEVREGKYGLKKRGYSGILLEKKNYLFQNHRKAKGCKTVLFPGCNFPAYY PKTLDKLVALLQKEGIEPYYDCCGKPIEELGLTKEAEAIFTRLNQDFKRRGIEEIILVCP NCFYHFGDKLNVKITTIYEKLSALNIGKKLSTEEYECFFPCPDREDKRWLPKLSPFLSGE LSEKKNLQCCGMGGCAFIQEPALSREMAESRPKEKKLISYCATCIGQFARFGESEHFLPL ILETGEKADYSHSFWNRLKHKFY >gi|333758476|gb|AFIH01000001.1| GENE 1610 1602536 - 1603087 332 183 aa, chain - ## HITS:1 COG:alr5186 KEGG:ns NR:ns ## COG: alr5186 COG0398 # Protein_GI_number: 17232678 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Nostoc sp. PCC 7120 # 6 133 56 180 250 80 39.0 2e-15 MSAFLYLVLCALAGAFLALPGITYALIAGTVFHAFWGTILCALSASISAGISFLMGRYFL HDAIKPKLEKNPYIKKYFFSGEKRNLLLLLFLTRTIPVFPFNLQNYAYGITDIPFSLYFI SSFLFMIPGTAMYTVAFAGLTEKKNPMLYFGISLGILVLLLLASFLFKKKNAVEKDIEKE SSV >gi|333758476|gb|AFIH01000001.1| GENE 1611 1603213 - 1603635 127 140 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227872178|ref|ZP_03990545.1| ## NR: gi|227872178|ref|ZP_03990545.1| hypothetical protein HMPREF6123_0484 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_0484 [Oribacterium sinus F0268] # 2 132 21 151 160 65 36.0 1e-09 MLLALYILRYFTMRKMGMARYMVYFREKWSGKELGYFSLLQWSALVILLLLTLALFLIIK RLFFCFRGKILRERGEKEAFPLFPVSYSAVLILYSFLYFFSLVGSPGREYTASLIVHVLM QIFSVLFLSTYLRKGTRHEK >gi|333758476|gb|AFIH01000001.1| GENE 1612 1603759 - 1604889 1285 376 aa, chain - ## HITS:1 COG:ynjE KEGG:ns NR:ns ## COG: ynjE COG2897 # Protein_GI_number: 16129711 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Escherichia coli K12 # 90 361 172 440 440 202 42.0 6e-52 MKKNYGKILLSATMLATALSACSNAKKAETSAVSSEKTTEATSEKASETKKAKETEKAGE KEATDLSSVKEETVYVSADYVKALLDSGKDVKVLEAAWGPVEADKDYNKAHIPGAFHVNT DDIEEEKTWNFRSPEEIEKLLKSYGITKDTIVVTYGNTPENTADDRLAAVLLWAGVEDVK NLSGGIDAWVKAGFETEKQVNEPVATNEDFGVKIPAHPEYVLSIDEVKEKMKDDAKFKLV SIRSKDEFLGKTSGYSYIDRAGEPLGAVWGHDTDDGSYNNADGTVVDLAKLEEYLGESGL SLEKNDIAFYCGTGWRASVPFLIAHENGFKNAYLYDGGWFQWQMDPENKVQLGEPGSSDY KEVQVKDLPTDKAAKK >gi|333758476|gb|AFIH01000001.1| GENE 1613 1605105 - 1605212 69 35 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPGHGSRYLFLVKLRESMHYFDFARQAYHTENPIS >gi|333758476|gb|AFIH01000001.1| GENE 1614 1605293 - 1605643 559 116 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227872176|ref|ZP_03990543.1| ribosomal protein L20 [Oribacterium sinus F0268] # 1 116 1 116 117 219 93 3e-55 MRIKGGLNAKKKHNRVLKLAKGYRGARSKQYRIAKQSVMRALTEAYKGRKERKRQFRQLW IARINAAARLNGLSYSKLMFGLKSSGIEMNRKMLSEVAIADPEGFKALCDSAKAKL >gi|333758476|gb|AFIH01000001.1| GENE 1615 1605670 - 1605873 304 67 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227872175|ref|ZP_03990542.1| ribosomal protein L35 [Oribacterium sinus F0268] # 1 67 1 67 67 121 92 1e-25 MAKLKLKTKRAAKKRFKLTGTGKLVRNKAFKSHILTKKSTKRKRNLRKDIVVDHTNEKVM KKILPYL >gi|333758476|gb|AFIH01000001.1| GENE 1616 1605891 - 1606412 348 173 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163801060|ref|ZP_02194960.1| 50S ribosomal protein L35 [Vibrio campbellii AND4] # 11 173 1 165 166 138 41 9e-31 MAAKKNAELEINEQIRDKEVRVIGAEGEQLGVMPVREAQQLAHDADLDLIKIAATATPPV VRIADYGKYRYELLRKEKEARKNQHTTELKEIRMTPNIDTNDLNTKLAAARKFLEKGNKV KIALRFRGREMSRMNQSKYILDDFGEKLSDIAIVDKSAKVEGRNMAVVLSPKK >gi|333758476|gb|AFIH01000001.1| GENE 1617 1606683 - 1607318 608 211 aa, chain - ## HITS:1 COG:BS_ysxC KEGG:ns NR:ns ## COG: BS_ysxC COG0218 # Protein_GI_number: 16079871 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Bacillus subtilis # 19 194 19 193 195 154 47.0 8e-38 MVIRSVELPFVCGVKSTLPKTERPEFVLAGRSNVGKSSFINALVERKSFARTSSTPGKTR TINFYNVNDSFYLVDLPGYGYAKTGPVEQEKWDRMIRRYLESGEDIEEVVLLLDARRIPN EKDLQMFSWILSTTGYEPIVVITKMDKLKRSERAKALKEIREKLGASKECMMIPFSSETK EGKIEFLDLVEKILETEESEKESVEKEQEKN >gi|333758476|gb|AFIH01000001.1| GENE 1618 1607320 - 1608636 263 438 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 [Bacillus selenitireducens MLS10] # 151 413 248 463 466 105 30 7e-21 MAMKPDDKVRCSFCGKSSKQVRKMIAGLNNTYICDECVELCQEIFDEEMGGEASGGEISD LHLLKPREIKEFLDEYVIGQEEAKKVLSVAVYNHYKRIMSKVRDIDVQKSNILMIGPTGT GKTYLAQTLAKILGVPFAIADATALTEAGYVGEDVENILLKLIQAADYDVARAEIGIIYI DEIDKITKKSENVSITRDVSGEGVQQALLKILEGTVASVPPQGGRKHPQQELIQIDTTNI LFICGGAFDGLEHIIEKRIASGSIGFGAEIVEKNRNNYDDILKQVQPEDLTKFGLIPEFI GRVPVDVELSSHDVDSLKRILTTPKNALVKQYQKLFEMDGVDLHFSDDAISAIAEKAVQR KTGARGLRSIMEGMMTEIMYDIPSDEAICDVEITKDVVEDGAKPLITKDETKRRERYELF QASNKESLKEKKASKKRG >gi|333758476|gb|AFIH01000001.1| GENE 1619 1608640 - 1609278 586 212 aa, chain - ## HITS:1 COG:CAC2640 KEGG:ns NR:ns ## COG: CAC2640 COG0740 # Protein_GI_number: 15895898 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Protease subunit of ATP-dependent Clp proteases # Organism: Clostridium acetobutylicum # 10 201 1 192 193 263 64.0 2e-70 MKEYTFPQNITTIPYVIQSTSRGERSYDIFSRLLNERIVFLGDEVNSDTASLVIAQLLFL ESEDPDKDISLYINSPGGSVTAGMGIYDTMQYIKCDVSTICVGMAASMGAFLLAGGTKGK RMILPNAEVMIHQPSGGAQGQATEIQITAEWILRTKKNLAKILAENCKQPFEKVLADTER DYWMTAEQALDYGLVDHIFEKRSKNEDSKEKK >gi|333758476|gb|AFIH01000001.1| GENE 1620 1609487 - 1610821 1588 444 aa, chain - ## HITS:1 COG:CAC2641 KEGG:ns NR:ns ## COG: CAC2641 COG0544 # Protein_GI_number: 15895899 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) # Organism: Clostridium acetobutylicum # 1 428 1 431 431 281 43.0 1e-75 MSVKVENLEKSMAKLTVTVAAQEFEEAVEKAYQRTKSRYNVPGFRKGKATRKMIEKTYGA QVFYDTALNEVLDRRYPEAAKESGLDIVSRPEIEISEIAEGKDLVFTATVAVRPEVKLGE YFGVEAEKADVSVSAKEVTERLNKELEKNARMIDVDRAIKKNDIATIDFVGSVNGKEFAG GRGEDYPLTIGSGTFIPGFEDQLIGVKAGESVDVKVTFPENYGAKELAGKEAVFKVTVKL VKEKQVPKADDEFAAEVSEFETLDEFKKDLKKQIKEEKEKRATSEVENNVIAKVVENATV ELPEPMVATQLDQMFYDYGRRMEQQGIPMEQYMQITGLTPAALKEQMRESAIANIKNSLV LDAIQKKEGIEVSEEKLEEELQRISDQYRMKKEDFVKTITDSQKESIKRELNIQATIDAL VSKAKLVKPEKKSKKEEKAEKEEA >gi|333758476|gb|AFIH01000001.1| GENE 1621 1611015 - 1611494 260 159 aa, chain - ## HITS:1 COG:mll4592 KEGG:ns NR:ns ## COG: mll4592 COG2954 # Protein_GI_number: 13473857 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mesorhizobium loti # 1 158 1 149 157 70 35.0 1e-12 MGVEIERKWLVTEESLSKEQTIRKDELDYSDMEQGYLCRNPVVRIRKAKYKDGRTEFILC YKGKGLLEREEYNLPLTEEAYLVLREKIEGRLIEKRRYRLPYGKYCIEWDIFKADLKGLM YAEVEFPSGEEALAFHPPSWFSRELTGEAGYSNADLAFQ >gi|333758476|gb|AFIH01000001.1| GENE 1622 1611617 - 1612723 1793 368 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227872165|ref|ZP_03990534.1| possible ribosomal protein S1 [Oribacterium sinus F0268] # 1 367 1 367 367 695 97 0.0 MSEMSFEQLLEESLKSVHAGEIVTGTVISVKPDEIALNIGYKSDGIMTRSDYSADNQLDL TTVVKVGDEIECKVKKVNDGEGQVILSHRDALQSKASEELRKAFEENAILTGKVVQVVKG GLNVEVDGARIFVPASLVSDSFERDLNKYQGQDIQFVITEFNPAKRRIIGDRKQIMSAQK KEQHDKLFSELKEGDTRTGVVKNLTDFGAFIDLGGADGLLHISEMSWGRIENPKKLFKPG QEVEVLVKEISGERIALTRKFPNENPWKDAESKYAVGEIVKGKVARMTDFGAFIELDKGI DALLHVSQISKDHVNKPSDVLEPGQEIEARVVDLDVDNHKISLSIKALLPEEEEDTADVD VSAVSEEE >gi|333758476|gb|AFIH01000001.1| GENE 1623 1612704 - 1612985 249 93 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227423810|ref|ZP_03906912.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SSU ribosomal protein S1P [Denitrovibrio acetiphilus DSM 12809] # 1 90 191 280 848 100 56 9e-87 NTICNATFERQSEAKELAGKSDAMVVIGGSSSSNTKKLYEICKAICPNTQLIQTVKDLKF NSDEAIRNVGITAGASTPKEIIEEVLTYVRNEF >gi|333758476|gb|AFIH01000001.1| GENE 1624 1612927 - 1613460 258 177 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229229955|ref|ZP_04354520.1| SSU ribosomal protein S1P; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Desulfotomaculum acetoxidans DSM 771] # 1 151 32 177 676 103 34 1e-117 PIYTYGAIVHNEKIVENLESRGVHVLKSKEELKALEQGIVVIRAHGVGKEIYELLEKRGL KIVDSSCPFVRKIQKLVFEHSKAGESVIVMGDPEHPEIQGILGWGDGDVTALKGIEEVLR LPDGNGKKFLLWHRPLSILINSKQFLKLLKKGVSYICYQYDLQRNFRTAVRSKGISW >gi|333758476|gb|AFIH01000001.1| GENE 1625 1613418 - 1613573 63 51 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAVVLAKSAGFCFGVERAVDAVYRVLEEEEKKIRRNVFPFILTGLLYIMKK >gi|333758476|gb|AFIH01000001.1| GENE 1626 1613575 - 1614243 658 222 aa, chain - ## HITS:1 COG:HI1219 KEGG:ns NR:ns ## COG: HI1219 COG0283 # Protein_GI_number: 16273138 # Func_class: F Nucleotide transport and metabolism # Function: Cytidylate kinase # Organism: Haemophilus influenzae # 5 216 3 214 231 186 44.0 3e-47 MPYSIAIDGPAGAGKSTIAKALAKSLGYYYVDTGALYRGLAFGLLQKGVPFQNEKAVEEE IKGIHVELLYENGVQKVLCNGVDCSAFIRTSEIGEGASVISQYASVREKLLDLQRNVARQ HSCVMDGRDIGSVVLPDANKKFFLTASPEVRARRRTLEFQQKGESANYESVLEEVKKRDE RDMSRAVAPLKQVEDAVLIDSSDLNIEEVVDKMLAYCVGSEA >gi|333758476|gb|AFIH01000001.1| GENE 1627 1614261 - 1615622 917 453 aa, chain - ## HITS:1 COG:CAC1849 KEGG:ns NR:ns ## COG: CAC1849 COG2081 # Protein_GI_number: 15895124 # Func_class: R General function prediction only # Function: Predicted flavoproteins # Organism: Clostridium acetobutylicum # 46 447 1 393 393 264 41.0 3e-70 MTESKPVRDEDAVNKLKGSQGKVRKRKECKGRKVDIIVVGGGPAGMMAAISAKQHKKNAE VLLIEKNEKLGKKLFITGKGRGNLTNSCEEEQFFSHFLRNPRFIYPAFRALSNRDLMDFM EKNGCPLKEERGGRIFPVSDKAYSLTDALKFALKKYGVKVECNRTLKTVKRKEGGFLCNI GGEEVFTKKLILATGGLSYPSTGSTGDGYRFAKEFSIPVTKLYPSLVKMEVLEEDIFPLS GLKLKHIVVTIEDEKGKVYGKKTGELYFQKDSVLGPTVLSLSAELSPMIHESPMGTFVLV IDLKGEMEDFDKTFLSECEKRGKESLKDLIQEKLPKQLFSSFCKRLEKEGVALGKKASES KKDERKKVLKLFHHFRFTIAATGSFKEAIVTIGGIDVKALSKKTMEAKSVAGLYFAGELI DADAYTGGYNMQIAFSTGYLAGKSAAEALTILQ >gi|333758476|gb|AFIH01000001.1| GENE 1628 1615636 - 1616964 1258 442 aa, chain - ## HITS:1 COG:CAC0278 KEGG:ns NR:ns ## COG: CAC0278 COG0527 # Protein_GI_number: 15893570 # Func_class: E Amino acid transport and metabolism # Function: Aspartokinases # Organism: Clostridium acetobutylicum # 4 433 5 436 437 445 53.0 1e-125 MLKIAKFGGSSCASSEQFEKVKNIVMADRDRKYIVVSAPGKRDGKDTKVTDLFISLYEAV QKKKGIEEIVEKIKRRYQEIIEGLSLSISLEDDFSEIVRRLMAGDSLDYAASRGEYLNAR VMAEYLGFPFIDAERLIFFSGDSCDFKKTEEVAKSVLSSVEYAVIPGFYGVNENGEVVTF SRGGSDVTGSLIAAAVYADLYENWTDVSGFLVSDPHIVEKPEVIDYITYRELRELSYMGA GVLHEDAIFPVRKEGIPIQIKNTNAPEDHGTMIVANTLKKPRFIITGIAGKKNFCSINIE KAMMNAEIGFIRKVLSVIEENGISVEHTPSGIDTLTLFIHQEELESHEQKVLQGIQRAVN PDLIELESDLALIAVVGRGMKSSRGVAGRIFSALAHEYINIKMIDQGSSEYNIIIGVKNE NFEAAIRAIYNMFVLSALPTKK >gi|333758476|gb|AFIH01000001.1| GENE 1629 1616957 - 1617064 93 35 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSDTCSAENRVLFHEWENDTIFPFFLYMEKGKIYA >gi|333758476|gb|AFIH01000001.1| GENE 1630 1617116 - 1618462 179 448 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 [Flavobacteriales bacterium ALC-1] # 297 448 277 413 413 73 30 4e-11 MKMQDLFLLAFSNLRRRKIRTLLTVLGVVIGTASIVVMVSLGLGMSESLLRSFQSSGSLT KINITNYGGIGTNAKNKVELTDESIQSFESIPHVIGTSPSLEVYVTAKVGALQGDFSLRG VSQAYFQQMKLKEGTYPKKGDAELSLIYGNTVAGSFHKGNNWDKEYSIDPMKDTLFYIFP EAQNNSKPGTAQTEGEQNKPQKKYIIKTSGVMEGSAEDYSEDSSYVYADLDSLKAFLKKI YKKNLVPDPKTGKNGKPLRYYSYDQAYVFVDDMNNVAAVQKQITDMGYSCYSQVEWLKQA QEQIKTTQLVLGGIGAVSLLVAAIGIMNTMMMSIFERTKEIGVMKVLGCDMGDIRNMFLT ESALIGILGGIVGIVLSYGVSFIINFLSSGGGEMVDSYTGGGGGNISTIPLWLAGFAIIF AMLVGMLSGYFPSVRAMKLSPLAAIRNE >gi|333758476|gb|AFIH01000001.1| GENE 1631 1618462 - 1620546 1991 694 aa, chain - ## HITS:1 COG:no KEGG:Closa_2183 NR:ns ## KEGG: Closa_2183 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 106 694 35 600 611 371 39.0 1e-101 MKENRKRRKAGEGVRAFLRTTIRSSAVFFLSFTMLFLFCFERHAYASYVNTNLNTFFHDP QDIPTGYPGQEMEIKVRVGYNGVNGLANPNTDEIKNVRVRLSNDQSYLTTKNSPTRTNKD NPYKNAGDDDEQGEAQKDAWDEGYKAGKNNAYKNGLNYVYPVDGGVYPFEVNASLFTQEK TLASLKKGEYQELTFKVNVRADALKMKDGAGNTSDGYFGVPFTIWYTDGNGQEQNRTEFV NVFITESGEVKNSGTKILEKTFVVGENQLTPTGNYPTPMNFSVNFRNQSKNTLYDVKVKF NTALAEKETVQLTENPKSEAQKDFPFAINEANYDRDFSVVKPGETVSPSYSMAIKSNTAS GYYPLSYTVSYKVAPGANVSVSDTYSFYVNVRNSTMIQVDKEKLGDFNANDRTKARLIVS AYRTEPEKVYAGQDFKLYLTMKNASTSIAASNILFTLTSEKSQDAAVFAIADGANSFVVN SLAAGAETELTLTVKANAGVDPKSYVMSINEKYDSPDFKNAEEKVDIDIPVNQTARMGFS NFSVTPESVSVGSESNAMFGINNTGKVILYNVQAIFQSDYIKKATAYVGNIKPGETGNVD VMLSAVKATGGDDTIPVEIQYEDVNGNKFTEKTEINLTITEQAETLPGDSMDNVPNSRIP ENHTSSVPLAVGAVVAALILCGIVVKIKKKGKNK >gi|333758476|gb|AFIH01000001.1| GENE 1632 1620533 - 1621321 770 262 aa, chain - ## HITS:1 COG:AF1469 KEGG:ns NR:ns ## COG: AF1469 COG1136 # Protein_GI_number: 11499064 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, ATPase component # Organism: Archaeoglobus fulgidus # 4 226 3 225 226 218 47.0 8e-57 MEPIISVRNLKKVFKIGDNDVPALNGLDFDIYQGEFIAIVGTSGSGKSTCLNMLAGLEKP SEGEIHIVGEAIEKMSESELVSFRRNHVGFIFQSYNLIPFLNAVENVALPLMFRGVDKEE RNKEALHYLELMNIAKEAEHTPNQMSGGQQQRVGIARALVINPEIIFADEPTGNLDSHTT EEVLSLMRKIVEEQKKTLIMVTHDPHIASWSDRQLRIVDGRIVETVLREGSAIEEEILAN NGKRPYTVVHPLKNEVKNDERE >gi|333758476|gb|AFIH01000001.1| GENE 1633 1621549 - 1622865 1155 438 aa, chain - ## HITS:1 COG:PH0710 KEGG:ns NR:ns ## COG: PH0710 COG0172 # Protein_GI_number: 14590588 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Seryl-tRNA synthetase # Organism: Pyrococcus horikoshii # 1 437 6 456 460 331 41.0 2e-90 MLDIKFIRENPDLVKENIKKKFQDEKLNLVDEVINLDVEARKVQMEADELRSKKNQVSKQ IGALMAKGEKEEAEKVKEEVAAFSKRLSELEEKEPMLQEEILKRMMVIPNMIDPSVPIGK DDSCNVENERFGEPLVPDFPIPYHADIMESFGGLDMDAAGRVAGNGFYYLVGDMARLHSA VLSYARDFMIDRGFTYVIPPYMIRSKVVDGVMSFAEMDAMMYKIEGEDLYLIGTSEHSMI GRFIDQILPAASLPLTLTSYSPCFRKEKGSHGIEERGVYRIHQFEKQEMIVVCEPEDAMN WYQKLWQNTVDFFRSLDIPVRTLECCSGDLADLKVKSCDVEAWSPRQKKYFEVGSCSNLG DAQARRLKIRVKGEDGKNHLAFTLNNTCVAPPRMLIAFLENHLQEDGTVTIPKALQAYMG GKEVLVPKYNSVEKERKA >gi|333758476|gb|AFIH01000001.1| GENE 1634 1622996 - 1623661 601 221 aa, chain - ## HITS:1 COG:L0047 KEGG:ns NR:ns ## COG: L0047 COG0036 # Protein_GI_number: 15673906 # Func_class: G Carbohydrate transport and metabolism # Function: Pentose-5-phosphate-3-epimerase # Organism: Lactococcus lactis # 1 206 1 206 216 207 49.0 1e-53 MKNRLSPSVLAADFGALREDLYLAEEAGAESFHFDIMDGHFVPNLSYGLSLVSALRKNSK AFFDVHLMVDNPDFYFPLCKEAGADRVSFHVEATPHIDRSLHAIRELGMEAGVALNPATP LSSLDEILPISTYVLLMSVNPGFGGQKFIPYSLDKVKRLRKLAEARGLDLEIGIDGGVGL QNIRDILDNGANFIIAGSSVFSKKEEVGESVRQFNRFIRKN >gi|333758476|gb|AFIH01000001.1| GENE 1635 1623682 - 1624638 576 318 aa, chain - ## HITS:1 COG:lin1933 KEGG:ns NR:ns ## COG: lin1933 COG1162 # Protein_GI_number: 16800999 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Listeria innocua # 23 312 4 284 291 213 40.0 4e-55 MRKMTAYWLPSTWNSTRRVSMIGKIIKGVGGFYYVHTKDGVYECHAKGAFRNKKERPLVG DRVEFSEVPDSEKEHTGHILRILERKNELIRPLVSNIDQAVLLFAVKNPAPSFPLIDRFL LHLLVKEIPCLLFFNKKDLLTREDGDFIEEIKEIYKKAELPVYFLQGNSAEDKNRILSLL KGKTTVFSGPSGVGKSTMINSLLGEEKMETGGLSEKIARGKNTTRHAEFFALDEDSYVLD TPGFTSLFPPEISPENLRYFYPEFEAYRKDCHYNSCVHIGERKTDCAVKRAVLEGKISAV RYESYKKLYQELIEEGRQ >gi|333758476|gb|AFIH01000001.1| GENE 1636 1624580 - 1626598 1763 672 aa, chain - ## HITS:1 COG:lin1934_1 KEGG:ns NR:ns ## COG: lin1934_1 COG0515 # Protein_GI_number: 16801000 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Listeria innocua # 9 271 7 271 342 237 45.0 5e-62 MKIEKDTLLQERYRIEGLIGEGGMSYVYKAQDIKLGRIVALKVLKDEFAGDAEFVNKFQN EAKAAAKLNHLNIVSTFDTVDEGDLHFIVMELVEGITLKNFIQRKGKIAEREAIGIALQL IDGIDLAHKMGIVHRDIKPQNIIVSTEGVVKIADFGIARAASQETVNTAVMGSVHYISPE QARLGISDARSDIYSFSCTLYEMLTGKVPYAGENSMAVVFSHLEDPIPRVRDSVKEISKA LDYIVWRGMQKKASLRYQSIADMGEDLRLALEDPDGSFLSEREDNGGKGVFGRNGLDQGI SNLYKGLAIASVILIVGVFLFLGYKVVGLLRSVQSISSDETKLTEKTTEDSTQVAITISA LDSLLPGIIGKTIPEAEDILKNYDIRLYEDKAEFSDEYEEGQIISYPGGQYNSHSRIYVT LSKGSKDLEFYDPKNPEDLSSLQKMSIAELERKLQDRNIQYSIKEEASDTVPAGYVIRTN KAGTKDAGALEITVSTGAASNLVAVPDLVGMTEDEAVLAIQSEGLVVGTITYVSGTSVDA DYVLSQSILSGTMVEQGQAVSLTVIRGQSSKPSTSTEKAWVSSINQSVSIGSGGPGVQGT VLVVVYLIQEIDGESRYTTIQSARSYALGSEMQLSINRIVGATGLSKGTIEVVDAENDRV LASFDLEFHPEG >gi|333758476|gb|AFIH01000001.1| GENE 1637 1626605 - 1627339 694 244 aa, chain - ## HITS:1 COG:lin1935 KEGG:ns NR:ns ## COG: lin1935 COG0631 # Protein_GI_number: 16801001 # Func_class: T Signal transduction mechanisms # Function: Serine/threonine protein phosphatase # Organism: Listeria innocua # 6 239 6 241 252 147 36.0 1e-35 MQFFAKTDQGKMRKMNQDFLFATKEGLGIFPNLFLLADGMGGHKAGDYASRYLVESLVSY IGEMKEESPIRCLDLGINRMNRELFCLSQNNGNLRGMGSTLVTAYVEDRVLFVSNVGDSR AYLFRKSRLKQLTRDHSYVEEMIERGKMIRGSREYLSYKNYITRAVGVEEQLAVDYFEEE LEEGDLFFLCSDGLSNMVDHESMVQVLKDDADLEEKGQALIDLANINGGKDNIALILVDP FGKE >gi|333758476|gb|AFIH01000001.1| GENE 1638 1627339 - 1628391 709 350 aa, chain - ## HITS:1 COG:CAC1726 KEGG:ns NR:ns ## COG: CAC1726 COG0820 # Protein_GI_number: 15895003 # Func_class: R General function prediction only # Function: Predicted Fe-S-cluster redox enzyme # Organism: Clostridium acetobutylicum # 1 342 1 337 345 347 50.0 2e-95 MQSLRDLEEREVEAWVLEHHFPRYRAEQIFRWVQEKDVTDFSEMENLRKDLRQALREEFS LALPELYRRYTSKLDETEKFLFTLADGHRIEAVFMAYHHGNTACISTQVGCRMGCAFCAS TLSGLARNCSSGEMLGQIVAIEHLTGKKISNVVLMGSGEPLDNYTEVLRFIRLLSGKIGR NISQRNITLSTCGIVPRILELAEEKLGITLALSLHAATDEKRKKIMPIANRYALSDVMEA VRFYFKKTGRRISFEYALVFGVNDGEEDIRELSGLLRKKGEHFPAHVNLIPVNPIKERDF TAPDRKKINRFKEGLEKQGITCTIRREMGADISGACGQLRRDAEMVEKED >gi|333758476|gb|AFIH01000001.1| GENE 1639 1628379 - 1629719 725 446 aa, chain - ## HITS:1 COG:BH2507 KEGG:ns NR:ns ## COG: BH2507 COG0144 # Protein_GI_number: 15615070 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA and rRNA cytosine-C5-methylases # Organism: Bacillus halodurans # 35 401 4 392 450 215 35.0 2e-55 MERKKRERLSGKKTQGDWKKRLAESKTATPCIHKKTEREAVLELLCSVFTGGEFLHLALR KLFSEESYFDTRSRAFITRLSRGTLERYIQIDYFLSLYSNTPLRKMKPVLLQVLRLSAYQ LLFLDKIPPHAAINEGLNYLKKRKLQGLVPFANAILRKIAQDKEQLLQKLEQEHREDAIG AALPEEIFAFLKRDYGVEETLRIAKSFLSSDAGFYIRNETGEGEKVLGNIMEEERFLSGE VSIQDFSSQEVGRIAHLREGSRVLDCCSAPGGKACHMASRLKGSGMVYARDEKSDKLHYI EENRERLHLENMEIEAWDARKPDSRFAKEEDKLDVVLCDAPCSGLGVIGKKADLRLHFSK EGVKSLQSLQREILSTVQSYVKRGGQLIYSTCTLSREENEENRDFILKSFPFRLETEKKF LPGEPGDGFYYASFIRTEETGQPCKV >gi|333758476|gb|AFIH01000001.1| GENE 1640 1629830 - 1630825 713 331 aa, chain - ## HITS:1 COG:BH2508 KEGG:ns NR:ns ## COG: BH2508 COG0223 # Protein_GI_number: 15615071 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA formyltransferase # Organism: Bacillus halodurans # 1 325 6 300 317 223 40.0 3e-58 MGTPDFAVESLEALDAAGHEIALVISQEDKAKGRKAIVEKTPVKQAAERLGLPVQSVHRL RTDEDCIRRIREIAPDFIVVAAFGQILPKEVLDIPRFGAINIHASLLPKYRGASPIQQAV LDGEEESGITTMLMAEGLDTGDILLQEKLPLDRKETADSLFQKLAELSRTCIVKTLEGFS KGEIHPVAQENEKASLTGIIKKRDGFINWNREASYIERMVRAYTPWPNAVSILPNGKTFK IWQADAVNKPDEEMLSLGNIQREDIEHFLGENFKEEYIPKEGAGGLFCSKNKQNLFFSTG KSFLEITELQVEGKKRMAAPDFLRGYSGKAE >gi|333758476|gb|AFIH01000001.1| GENE 1641 1630837 - 1631331 684 164 aa, chain - ## HITS:1 COG:CAC1722 KEGG:ns NR:ns ## COG: CAC1722 COG0242 # Protein_GI_number: 15894999 # Func_class: J Translation, ribosomal structure and biogenesis # Function: N-formylmethionyl-tRNA deformylase # Organism: Clostridium acetobutylicum # 1 146 1 144 150 136 53.0 2e-32 MAIRSIRTIGDPILEKKTKPVKEMTDRIKDLISDMFETMYEANGVGLAAPQVGILKQLFV VDIGDGKQYVAINPEITTLGEEMQTGEEGCLSVPGKEGLVTRPMRILMKALNQNMEEYEL EASGFLARAFMHENDHLQGILYTEKVEGELEDVVYEELDEEEQI >gi|333758476|gb|AFIH01000001.1| GENE 1642 1631377 - 1633071 986 564 aa, chain - ## HITS:1 COG:BS_priA KEGG:ns NR:ns ## COG: BS_priA COG1198 # Protein_GI_number: 16078634 # Func_class: L Replication, recombination and repair # Function: Primosomal protein N' (replication factor Y) - superfamily II helicase # Organism: Bacillus subtilis # 1 563 242 799 805 458 42.0 1e-128 MLKDGYSGKEKVKKRGKATELLWKAEEAPLSLTKEQANVLEGIKLAFSKGEKAALLFGVT GSGKTEVYLKLMEEIIRKGKEVIFLIPEISLSFQTRSRIEKRFPGLVSVLHSKMSQGERA ESMEKCRSGEVKILMGPRSALFAPFSNLGLIIMDEEQDRSYKSEQAPRYETRDVIRKRGE LSSCPVLFGSATPSVQLFSEVEKGALPCFCLHNRAVEGSTLPKMQVVDMRKELEEGNRSI FSRVLEGKIQERLDRGEQVMLFMNRRGYAPFVSCRKCGEALRCPHCDVSLNLHKNGILQC HYCGYQTNLPKICPNCKSKYLAAFGSGTEKLESICHSVFPKAGILRMDRDSTGKKGKYEE ILQAFSEEKADILLGTQMIVKGHDFPKVTLVGIIAVDQILLDSDFQAGEWAYQLITQVSG RAGRGERAGEVLIQSYQPDHPLLELALKQDYLSFYKEEKNYRKRLSYPPFSVMLAMQCIY TEEAYLDYILGKLMPRVQERIRDGGGETYGPFPATVYKIKDKFRKIIYIKHSNHDIILQL RDYFIQELKQEDKRNLILLQFDLL >gi|333758476|gb|AFIH01000001.1| GENE 1643 1633035 - 1633355 282 106 aa, chain - ## HITS:1 COG:BS_priA KEGG:ns NR:ns ## COG: BS_priA COG1198 # Protein_GI_number: 16078634 # Func_class: L Replication, recombination and repair # Function: Primosomal protein N' (replication factor Y) - superfamily II helicase # Organism: Bacillus subtilis # 2 106 3 109 805 60 31.0 5e-10 MYAEVIVDISHEAIDKSFSYRIPEDMVLHVGDPVLVPFGRGKKKAYVLSIHERVCFPEEK IKDIDSVLDKEFSVEEELLSLAVWMSREYGTGLNQCLKTVIPVKKK >gi|333758476|gb|AFIH01000001.1| GENE 1644 1633365 - 1634699 895 444 aa, chain - ## HITS:1 COG:L141766 KEGG:ns NR:ns ## COG: L141766 COG0770 # Protein_GI_number: 15672324 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide synthase # Organism: Lactococcus lactis # 8 440 24 440 440 207 34.0 4e-53 MDFEKLFLAIEKIVVDSREDCSSALFVPIRGEKVDGHRFIPMAISHGAKEIFTEEDFSDL GKQYPDVHFHRVENTLAALQDFGAYCRRRYRGKLIGVTGSVGKTTTREMIATALSSEKTV FQTKGNANSQIGVPITLFHMAKEEREISVIEMGVSIPGEMEKLARMASVDMAVFTNIGTA HLENMQTKENTCFEKMHILMGENRTVHLYLPKKDLILSVLDEKKIYEMGFLGGKREEREG SVKGSSEEEERIHLKLSFYEKANIPLSVPGEHMQENAGIALLLSKELGVSEEAAKKALFT FTGLPGRGEKIRTKKGITILDDSYNASPDSMKASLHVLSAEKGGRKIAVLGDMNELGRDE LLLHREIGEELRKLSIDALFTLGEKSKEIWKGLGEKKIPGEACTSLSALTEAVKDEVREG DIVLFKASHSLSLSTVINKLLEEE >gi|333758476|gb|AFIH01000001.1| GENE 1645 1634701 - 1636194 1287 497 aa, chain - ## HITS:1 COG:CAC2129 KEGG:ns NR:ns ## COG: CAC2129 COG0769 # Protein_GI_number: 15895398 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl tripeptide synthase # Organism: Clostridium acetobutylicum # 22 488 22 476 482 303 39.0 6e-82 MSQWIDALTACRVLLGDPTKEELQSISYDSRKAKVGDLFLCLKGTKLDSHDKIPELIASG VRIFVVEKELEELDLSDVERDKLCMVKVENGRKALAELSAFYFHYPSREMLMIGITGTKG KTTTASMVRSILEEGGYRTGLIGTTGIDYAGIHEESRNTTPESYTLQETFRKMREKGCTA VVMEASSQGFKMHRTDEILFDYGIFTNIEEDHIGENEHKDFAEYKYYKSCIFKQSKIGLV NRDANFAEEFLENAPCPCYTFALENMADFQAKEIENLRQDDFIGTCFTFLHGEVKERIFN HLPGAYNVYNALAAVSLACLLKIPMEKIKHALSKIKVNGRMEVVLQRDGHTVIVDYAHNA MGMKNLLQTLRSYNPGRLIVVFGCGGNRSKDRRYGMGEVAGEMADFSILTADNSRYEKTE DIIADIESTLSKKSSAYIAIPDRREAIAYALAHAKRGDLIAVIGKGHEEYNEVNGQLTHF VDREVILEEADKLAEKK >gi|333758476|gb|AFIH01000001.1| GENE 1646 1636234 - 1637898 1601 554 aa, chain - ## HITS:1 COG:CAC3201 KEGG:ns NR:ns ## COG: CAC3201 COG2759 # Protein_GI_number: 15896448 # Func_class: F Nucleotide transport and metabolism # Function: Formyltetrahydrofolate synthetase # Organism: Clostridium acetobutylicum # 1 553 1 555 556 661 60.0 0 MKSDLEIAQERELLNITDVAAKYGIPEEEIELYGKYKAKLSPSVYEKRKKEKDGKLILVT AINPTPLGEGKTTVSVGLTDALNRLGKKTTVALREPSLGPCFGVKGGAAGGGYAQVVPME DLNLHFTGDFHAITAANNLLAAMLDNHIQQGNALDIDLKRIQWKRCVDMNDRVLRNVTVG LGGPGDGVVREDHFIITVASEIMAILCLSKDIEDLKERLSRIIVAYNRKGEPVRAKELHA VGSMAVLLKDAMKPNIVQTLEGNMALVHGGPFANIAHGCNSIMATKYALKLSDIVVTEAG FGADLGAEKFFDITCQLGDLKPDCAVIVATVRALKYNGGMEKNALLEENLEALEKGIVNL EKHIENVQKYGLPVVVSINRFASDSENELNFIAQFCEKKQVGFAITEVHGKGGAGGEALG KEVLKQLDKAAAFRPVQTLSLSLEEKIGKVAKEIYGAKDVNYSPKAKKELEKLSLLGFSE CPVCMAKTQYSLSDNPALLGRPEGFTLQVKDLYVSAGAGFVVVLTGDIMTMPGLPKVPAA ERIDLIDGKIIGLS >gi|333758476|gb|AFIH01000001.1| GENE 1647 1637901 - 1640234 1673 777 aa, chain - ## HITS:1 COG:CAC1812 KEGG:ns NR:ns ## COG: CAC1812 COG1674 # Protein_GI_number: 15895088 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Clostridium acetobutylicum # 292 768 298 765 765 522 57.0 1e-147 MAQRENPTVYRRILSIVIFYLFLESFIGTIFLGKEIPFDFNSLLDGGGVLGNGILFLLSR ILGKLGALFVLFFLLLLSLVFITEQPIVSLFTAYSVRTAEKAGRKAKEDIRRISENAKEA LRERREKREQREARGVDFSATDFHLEDFAEESKDNAGIPFKEMREEGGFSFEELDLTRGL GESSDNRKDEEFSEREGSRPEENSIVENGSFTLKEDILESPMTIEERGRSRKRKTEEDSD LKKRLLEQDSSTRVVETASGGRIASDMEKLQERIAEKKEEQEINPVQETPPYHFPPLSLL KCSKDKHAGEKNEIEKNARTLQETLKSFGISVSITNVSVGPSVTRYELQPEQGVKLAKIV SLSNDIKMRLAAADIRIEAPIPGKSAVGIEVPNKNSQVVYLGDILSSEEFQKNTMRLAFG VGKDIAGKVVVTDIAKMPHLLVAGATGAGKSVSINTLIMSILYKYSPEEVRMIMVDPKVV ELQVYNGIPHLLIPVVTDPKKAAQALNWAVAEMTNRYKKFANFAVRDLAGYNEKIRKMSK EEREKEGVDVLPQIIIIIDELADLMMVSAQEVEDAIVRLTQLARACGMHLIIATQRPSVN VITGLIKANVPSRIAFSVSSGVDSRTIIDMNGAEKLLGKGDMLFFPQNLPKPIRVQGAFV SDEEVGKVTDFLKNQGTVEYNERIIDSIEQGESGNTAEASSSDRDELFIDAARTVIDTEK ASIGFLQRRFRIGFNRAARIMDQLAEAHIVGEEEGTKARQILMSEEEFEANFVNKGE >gi|333758476|gb|AFIH01000001.1| GENE 1648 1640509 - 1641840 1027 443 aa, chain - ## HITS:1 COG:no KEGG:Bsel_0247 NR:ns ## KEGG: Bsel_0247 # Name: not_defined # Def: hypothetical protein # Organism: B.selenitireducens # Pathway: not_defined # 32 439 30 438 442 94 22.0 1e-17 MYSVAIVSPEKSLEPIEKVIQDKSFECHFYPYIYTHLSDIDKIYEDCRKKCDVIFFSGEL GYHYILKKFPDIRIPCAFTAYEPIDVLSIFLQFQIEHKDIPLNRVFCDFLTETNHYMGVS KYIQEEERPYFYKDSQYDYKHITEYAKKLWDKGKIDMILSRSINNLKRLDELKIPYVAVF PNEEMIRNSIQHALDDLRLSTIVEEKTLSVLLRLPFSEEVDKDEKEFREAQVYQFLTAYR KAKHLHFSIEKGFNQFAVSAEISMDAEILPILEEILNQCRKNLNFPFRLGMGLSTSMERS RYYAERALMESNHYSRNDAFFMEEEGKITGPLSQELRLVYNYKNEKALQFAKAQGIHESN ILKLIGLYEQAPEKAFNAQSLAELLGITSRSASRILAKLLQLRLIREGVIEEKKNSGIEK KMRHGRPALHFHFVKENFEASFL >gi|333758476|gb|AFIH01000001.1| GENE 1649 1641907 - 1643826 1791 639 aa, chain - ## HITS:1 COG:sll0912 KEGG:ns NR:ns ## COG: sll0912 COG0488 # Protein_GI_number: 16331003 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Synechocystis # 4 631 2 636 636 444 41.0 1e-124 MAASILNVENASKSFQNKVLFQDANFYMQEGEKVALIGKNGGGKSTLLRVIAGEEELDRG TVVKKRNLKIAYLPQETKFPEEESVLQALIKHFSIQNTVEEKEAFGRKVMQELGLLEYDA PCKTLSGGQKKQLALLAVLNVEPDLLLLDEPTNHIDEEVSEWLEGKLSQFKGSILLVSHD RYFLDTVCNRIVELEREAFISYDCKYDAYLEEKANRLSAEVAKERARQNLLRKELAWVRR GAKARSTKQKARLDRYEKLSEMHGPTEEEELNLSSIYTRLGKSTIFLKDISKSYEKKCLF SHFSYNFLRNDRIGIIGKNGVGKSTLMKVILGEISPDSGTVEIGQTVRIAYFRQENEELN NEERVIDSIKDIADYLPTTEGLISAAQMAERFLFTPEMQFAPIGKLSGGEKRRLYLLRIL MSAPNVLFLDEPTNDLDIASLMVLEDFLDHFSGIVLIISHDRYFLDRTVNRLFAFQENGR IRQFEGGYTDYQVALLSESLPEGGRGGKESSESTKGNKNGKNEDKNGKNGIKNGKNEEEA DKQAETESGGKSRRKERALKMSYREQKDYETIEEEIGKLEEKIEELDRQSVENARDFVRL QELQKEKEEAERLLSEKWERWEYLSDLAERIETGEKRLD >gi|333758476|gb|AFIH01000001.1| GENE 1650 1643840 - 1645198 1100 452 aa, chain - ## HITS:1 COG:L170983 KEGG:ns NR:ns ## COG: L170983 COG0534 # Protein_GI_number: 15672149 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Lactococcus lactis # 7 446 1 440 446 257 36.0 4e-68 MGKKTVMVDLTKGNPMSLIIGFALPMFLGTLFQQFYSMVDTIIVGKLLGLNALAGVGSTG AISFMINGFVIGLCSGFAIPVAQKFGAKQESKLRKYVGNLLWLSIIFSIVMTALIALATD GILRFMNTPEETFSYAFDYIFIIFLGIPTTFLYNMTSSTIRALGDSKTPLYFLIFAAILN IILDYLSIRFWGFGVDGPAYATVISQLLSGLLCLFYMRKKFPILHFQKGELRLEKHYYKR LLFIGVPMGLQYSITAIGSVVLQTAVNGLGAAPMAAITAGQRISGFCCCVFDALGATMAT YAGQNSGAREYKRIDRGLWAATKIGSIYAVLICILLVLFGGEIPKIFIDGKEREVLAMTK QFLIANSLFFIPLVFVNCWRFTIQGMGFSGFAMLAGVSEMIARSLVAFIFIPIFGYIAAC YASPLAWLFADIFLVPAFYSCLKKLKSKTSVI >gi|333758476|gb|AFIH01000001.1| GENE 1651 1645218 - 1647164 1257 648 aa, chain - ## HITS:1 COG:lin0825 KEGG:ns NR:ns ## COG: lin0825 COG3855 # Protein_GI_number: 16799899 # Func_class: G Carbohydrate transport and metabolism # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 4 643 5 651 653 604 48.0 1e-172 MKKDLDYLRLLAKSFPTANQAAAEIINLKAICALPKGTEYFFSDLHGESEAFIFLMRSAS GVIRDKISEIFSHFLPEEEQLRLANLIYYPRETFSNRKNAFIEDKEWQKITIHRLTALCL KIASKYTRSKVRKKLPKEFAYAIDELLHDEEEDTKLYHKEILQGILDVNRGREFIIALCE LIQNLSIDSLHIIGDIFDRGPHPDRIMEELMCFHDVDIQWGNHDVDWMGAFAGNPACIAN VLRIATSYNSFDVLEDGYGINLRPLSMFAQEIYGEDPCTCFYPHLWDKNIADSVEPELAA KMCKTISVIMWKEEGQLIRRHPEYCLEHRMLLHKMDLEKKVVEVEGKIYPLRDCFFPTID WEDPYALSKKEKELMDTLIYSFTHSKMLKKHMDFFFTHGSMYKIINHNILYHGCIPMTEE GDFLSISTRDGEVFGRRLMDYCEQKCIEAYFMNRDLDPNGKLYATDFFWYLWCGPKSPLF GKDKMCTFEHYFIAVPESYQENYNAYYKWIEKESYVDKIIEEFRENPELSHIINGHVPVK SKQGESPIKASGKLFMIDGGISKAYHSKTGIAGYTLIYDSKHLSLAEHKDFQKGEENTPD IRVVERMKSRIRIAETDKGTELRRQMEDLWDLLEAYGNGDLKECLREV >gi|333758476|gb|AFIH01000001.1| GENE 1652 1647485 - 1649353 1253 622 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 [Rickettsia canadensis str. McKiel] # 1 613 3 600 636 487 45 1e-135 NRQTPFLFYVFVALIITLLLNSFVIPAIKQARIESSTYSDFQQAVENKEVKAVELGENSI KYEVEKDGKTTIYSTTRIKNEFTEAQILSELTKQGVKYNETLPVENNFLLNFIFSWVIPL LLFMAVGSWLSKRMTSAMGNMGGGGFGLGGFGKSNAREYEKKDDSIRFRDVAGEDEAKEL LTEMVDYLNNPDKYSKIGAKIPKGALLVGPPGTGKTMLAKAVAGEAGVPFFSISGSEFVE MFVGMGAAKVRDLFDQAKKKSPCIIFIDEIDAIGKKRGAGGLGGNDEREQTLNQLLTEMD GFDSSKAIILLAATNQPDQLDPALLRPGRFDRRVPVELPDFQGRVDILKVHAKKIKMSDN VNLEAIAKAAPGASGAELANIINEAALRAVRAGRERVIQSDLEESIEVVIAGYQKKNKVM TDKEKLIVSYHEVGHALVAALQKDSAPVHKITIIPRTSGALGYTMQVEEEGNHYLYSREE LENEIATLTGGRCAEELIFHTCTTGAANDIERATKSARAMITRYGMADSIGMVAMEQLHN QYIGGDATLTVSPETQTKIDEMVVELVKKQHDKAYKLLEENITKLHEITKFLYERETISG EEFMEILNRKEVDPSVVARVED >gi|333758476|gb|AFIH01000001.1| GENE 1653 1649311 - 1649433 67 40 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDNKNSFPNFDDFFRIGKITTNREITGIDRRLFYSMFLWR >gi|333758476|gb|AFIH01000001.1| GENE 1654 1649618 - 1649920 290 100 aa, chain - ## HITS:1 COG:BH0558 KEGG:ns NR:ns ## COG: BH0558 COG1937 # Protein_GI_number: 15613121 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 14 98 11 96 100 78 48.0 2e-15 MEKCHCAERKKLKPRDEAEKKALISRLNRMEGQIKGIRNMLLEDRYCVDIITQVSSVSSA LKAFSKELLQRHISSCVVEEIQDGKEDAVEELCELIKKIM >gi|333758476|gb|AFIH01000001.1| GENE 1655 1649933 - 1652509 2126 858 aa, chain - ## HITS:1 COG:CAC3655 KEGG:ns NR:ns ## COG: CAC3655 COG2217 # Protein_GI_number: 15896888 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Clostridium acetobutylicum # 2 743 74 812 818 577 45.0 1e-164 MKKYTVTGMSCAACQTRVEKAVQKVPGVKSCSVSLLTNSLAVEGEVSETAVQEAVEKAGY GFISDTKSEAQKEDALEDRETPKLKKRFLQSLVFLLVLMTLSMGPMLFHFSLPAVLRYPG ILALTEMLLAIIVMLINKKFFTSGFSALFRLAPNMDSLVALGSSASFLYSLGVLYGINYY LELGNAEMAHQIGHHLYFETAAMIPTLITLGKMLESISKGRTTSALKGLMDLSPKTAVLL KDGVEETVSVDDVAVGDVFAVKPGEQIPVDGLILSGRTAIDESALTGESIPADKEEGDKI SAGTLNRSGYITAKAVRIGKDTSLSQIIEMVSDAAATKAPIARIADKISAVFVPFVMGIA LLTFLVVLGSGAEFSTALSRGVAVLVISCPCALGLATPVAIMVGNGVGAKNGILFKTASS LEEAGRVEIIALDKTGTVTNGTPVVTDIVPVREEKKEELLKLAVSIEKNSEHPLAKAIQS YGEQNGISPYPVEDFQAMAGHGITASYGGEKIIACSEGYLREHFPVKEDFLENLNALSAE GKTNLFFLRGEELLGAISVADSLKTDAKEGIEELKKQGVFTVMLTGDRKNTAEAIAKEAG VDLVIAEVLPDGKEEVIRKLQEFGKVAMVGDGINDAIALTRADLGIAIGAGTDVAIDAAD IVLMKSNVSDIPRSIRLSRATIHNIHENLFWAFFYNVICIPLAAGFYSAVFHWNFEMNPM VGALAMSLSSVTVCLNALRLNLFSIKDTKKDRKKGIGEEKRQAILAEFSQKGTAIKDKSE NTENQEEKRMEKKMEITGMMCGHCEARVKKALEAVSGVDHAEVSHENGTATVFLKEEVDN ATLKAAVEAQDYGVTNIE >gi|333758476|gb|AFIH01000001.1| GENE 1656 1652664 - 1652954 159 96 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEYRKREVAETETIGRMELARQMESVGRTELTGKTKRNKMIERKNTEPMKQCGKYSTILS HPYPFPLCRQRTDLSHRAVQFFSFAALKGYEEMIEE >gi|333758476|gb|AFIH01000001.1| GENE 1657 1652944 - 1654482 1258 512 aa, chain - ## HITS:1 COG:SA1196 KEGG:ns NR:ns ## COG: SA1196 COG0389 # Protein_GI_number: 15926944 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Staphylococcus aureus N315 # 9 508 12 418 420 181 28.0 4e-45 MEEKESCGIMAIDLKSFYASCECVERGLDSMDAYLVVADGGRTEKTICLAVSPALKNFGI PGRPRLFEVIERVKEINYQRKRKTEERRLVGSSCLDSDLKAYSFLALSYITAPPRMALYM EYSRRIYEIYLRFVSREDIHVYSVDEVFIDLRPYEKVYRKSAEELAAEIARTVYGEMGIV ATVGLGENLYLAKVAMDIMAKHLKTTEDGLRLAKLTERSYRRELWGYRPIRDFWRIGRGT AEKLESYGIYTMGDIALASLSGEEKKQNQTLLYKLFGIQAEYLIDHAWGYEPCRIADIHA LQAKRKSLSSGQVLPYPYDFQKGRIVAEEMAEALAYELKEKGLCTELVQLSISFDGENVG ESYAGEKRKNHYGKFVPRGVHGLHHLTERSNREKEITEAILSIYDEIMDRRLSIRKLSLS FEDISPVKKEKLGQVDLFTYCREKEENEKKEEGCGKGILQESFPDREERVREASLQLMQK YGKNAVLKAYQYLDGARGRERNKQIGGHSSGI >gi|333758476|gb|AFIH01000001.1| GENE 1658 1654764 - 1655636 692 290 aa, chain - ## HITS:1 COG:SPy1936 KEGG:ns NR:ns ## COG: SPy1936 COG1307 # Protein_GI_number: 15675739 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 10 287 9 283 286 171 34.0 1e-42 MENYILSCCSTMDLRKGWAEERGVNLIYAKFFLEGEEFRDDFYESISQDKLFERMLSGEK SQTTQVNTEEYIGSFRKYLEQGQDIFHICLSSGVSGTFNSCHIAKDILLEEFPERKIEIV DSLMASSGYGLLVDKACELKRQGLDMERLRAEVEKWRNRLHGYFFTSDLRFFIQGGRVSK AAGFIGGLLKICPVLKITEEGKLKPIEKARGKKQAIENILSKMEKEGYLSTEKCFISHSA CPQDAEKLAESIRERFHPEGSIEIFDIGGTIACHTGPGTVSGFFFGKEKA >gi|333758476|gb|AFIH01000001.1| GENE 1659 1655709 - 1657313 1589 534 aa, chain - ## HITS:1 COG:DR1325_2 KEGG:ns NR:ns ## COG: DR1325_2 COG0791 # Protein_GI_number: 15806343 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell wall-associated hydrolases (invasion-associated proteins) # Organism: Deinococcus radiodurans # 423 510 51 138 172 87 47.0 6e-17 MKKRKSKNRIRRIGLLLLFASLFLCSCRHSSEKEKASASVLSPSEMGGDSDKASDSELKL KLDEKIKTEQEEALSKYQNLGLVQCDSYINFRSDTNENDIRNIIGLLRNGAGVEVLDANP EGKDGWAKVRSGGLEGYIAKQYLLEGEEAKKKACDFMAPRVTILADKLRIRSTPEKIEGN TLSSCAKGERYIVLSRSGKDYLKIFMDTIEGVEEAYISSKSENVRLEYGLDEARSLNLRQ KVLNMYDNLGVSKAQDYINIRSSPEDKGIENIIGKFPSFAGANILSEENGWLKIESGGIT GYVKAELVARGKEAENLALEHATVMAIVNTDALNVRSNPDLNSSAWTKITRDQRYSVVNQ LDGWVQLDLDSGDDEDGEQGAFVSTRDNNVSVSYALYEAISYRPAQDRANQAAKRRSDLV NFACQFVGNPYVWGGTSLTRGCDCSGFTQTIMSKYGVSLPRVSREQAKTGIKVSSENIKP GDLIFYANRRGVINHVGIYIGNGQVVNAASRRSGIRIYRWNYRTPVAIRNVLGE >gi|333758476|gb|AFIH01000001.1| GENE 1660 1657360 - 1658202 393 280 aa, chain - ## HITS:1 COG:BS_ylmD KEGG:ns NR:ns ## COG: BS_ylmD COG1496 # Protein_GI_number: 16078601 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus subtilis # 34 263 33 257 278 151 35.0 1e-36 MKTIFPIKDYKSGNHTVPLIESPLLQEVRGLRHGFSTRKGGVSKEHLSSLNLGFNLGDER EKVLENFRILGSLFEAKPEDFVLTQQTHSVNVRHVGREDRGKGIFRERDYTDVDALMTDE EGVILSAFSADCVPILFYDKGHRAIASCHSGWRGTHGRILARVIEAMQREFSSKPEEIYI AIGPSICKNCYEVSEDVGEAFLDAFPALREETKNASPIERVSEEKFHIDLWELNRWIALE NSIPAENISVSGYCTMERPDLFFLTDTVREKEGYRERLSD >gi|333758476|gb|AFIH01000001.1| GENE 1661 1658204 - 1658827 695 207 aa, chain - ## HITS:1 COG:CAC3581 KEGG:ns NR:ns ## COG: CAC3581 COG1011 # Protein_GI_number: 15896815 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Clostridium acetobutylicum # 5 190 3 185 201 100 33.0 1e-21 MISYKNILFDMGNVLVTYNPEWVIRRYTEDEELIREVKNIVFNSQEWLLLDAGLIEEEKA ERNWMERLSSDKARELAHLSFQNWHLYNMKVIPGTAEMIRALKENGKEIYLLSNASMRLL SIYKEVIPAVECFSGIFYSAAHKCVKPQDIIYERFLKEYSLKPSDCFFIDDLEENISAAK AVGISGAVMKSRTAKETAEILGLNIGV >gi|333758476|gb|AFIH01000001.1| GENE 1662 1658980 - 1660320 915 446 aa, chain - ## HITS:1 COG:BS_aroE KEGG:ns NR:ns ## COG: BS_aroE COG0128 # Protein_GI_number: 16079317 # Func_class: E Amino acid transport and metabolism # Function: 5-enolpyruvylshikimate-3-phosphate synthase # Organism: Bacillus subtilis # 10 438 7 424 428 389 51.0 1e-108 MIAELYGVGRVLKGKLCVPGDKSISHRAIMFSSLVKGKTVVEGFLPSEDCLSTMDIFQKL GVSIEREGTKLTIEGKGMEALGAPASPLYCGNSGTTMRLMAGILSGQTFSSVLFGDESLE KRPMGRVLIPLSKMGAKISAEGEKSTAPLKIEGSALKGICYESPIASAQVKSAVLLASLY AKGETVYTEPSLSRDHTERLLSAMGADIETKILEDGKAEIHLRPGKVLHPIPGIFSVPGD ISSAAYFMAACFFLPGSEILLENVGLNESRSGILDVLSNMGAKFQILNKKTIGGEERGDI LFTYGKLRGTEIAGALIPRLIDELPVLAVLATIAEGETVIKNAEELKVKESNRIRAVVEN LNRLGIPCVETEDGMRISGQGGNFPLKGKRIPSFKDHRIAMSFAVLGLLCPKESPMEIED AECISISYPSFFKDLENLLDGNPAVC >gi|333758476|gb|AFIH01000001.1| GENE 1663 1660317 - 1660952 598 211 aa, chain - ## HITS:1 COG:no KEGG:Closa_3203 NR:ns ## KEGG: Closa_3203 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 4 208 5 212 215 261 65.0 2e-68 MLTKKLVITIGRQYGSGGRTVGKHLAESLGIPFYDEEILRITSEKTAIGEQYFRLADEKA GSNILYKIVDSLKPRLGKPSLEEDIVSPENLFRFQSQVVVELAEQESCIIAGRCANVILR EAKKEHVDFFVYADMEKRIERTMDYCKVDEEEAKKRIKKIDRERREYHKYYTGEDWMKVD NYDLMINASRIDYREMEVLMRNYLEMKGYLK >gi|333758476|gb|AFIH01000001.1| GENE 1664 1661113 - 1661907 274 264 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 253 1 243 245 110 31 3e-22 MLDLKNISKTFNPNTIHEKRALENLSLHLDKGDFATIVGSNGAGKSTLFNAISGSFLLDK GTVVLEGRDITFLQEHKRSAFIGRLFQDPLMGTAPHMSIEENLSVSYIRASGLSLFSRAG KKEKAYFREQLSLLDMGLEDRMNHPVGLLSGGQRQALTLLMATMVTPKILLLDEHTAALD PGTAEKVLNLTKSIVAEREITCLMITHNMHQALELGNRTLMMDSGKIVLDLSGEEREHLT VDMLLKKFSEKAGKALDNDRILLS >gi|333758476|gb|AFIH01000001.1| GENE 1665 1661900 - 1662829 1042 309 aa, chain - ## HITS:1 COG:RSc1739 KEGG:ns NR:ns ## COG: RSc1739 COG4120 # Protein_GI_number: 17546458 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Ralstonia solanacearum # 13 283 9 281 303 154 39.0 2e-37 MAEFFTIGIIKTALEIGLIYALVAMALFISYSILNIADLSTDGSFTLGTAVSAVFTISGH PILGIFMAMLSGSLSGFCTAFLQTTLGIESILAGIIVNTGLYTINLAVMGFSSNLSIFGT DTVFTLFAGENPFLSEWGTLILLLLILLVVAFALRWFFGTGLGLSIRATGDSPAMVRASS INPAFTITVGLCLSNALTGLSGSLIAQYNKASDINLGNGMVTVALASLVIGETLFGKRKL LGRILGVIGGAILYRLVIALALRLRVPTEAFKLVSALIVALAISSTRIKELFHYAKLRRN AMRERGENA >gi|333758476|gb|AFIH01000001.1| GENE 1666 1663010 - 1664131 1298 373 aa, chain - ## HITS:1 COG:SP1069 KEGG:ns NR:ns ## COG: SP1069 COG2984 # Protein_GI_number: 15900938 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, periplasmic component # Organism: Streptococcus pneumoniae TIGR4 # 49 350 38 333 344 162 36.0 7e-40 MKKKLLVTLGLASVLALAACSKPAEKAESKGDESISAEEKGTEAKAEEKTEEKGETGEEK TYKVGILKFMDHPSLNQIEDSLCTELDSLSKDGVKYEYKEYKLNGQGDASVLNQMTAQLL ADKVDVIVPIATPAVQVVQSATEGKNVPVVFSAVSDPVSAKLVKSMEEPGGMITGTSDYL NTDAIMNLIFAANKDAKKIGLLYSKSEDSSKAPIEDAKKFLADKGVEVVEKTGTTTDEVN QAVDALIAEKVDAIFTPTDNTIQKAELSFYEKLQKAKIPHYGGADSFALNGAFAGYGVDY VQLGKATADMVDEVLHGGKETATLPVQTFDNGIATVNTDTAEKLGFSMDELKEVFKPYCT KVEEIKTNQEFAK >gi|333758476|gb|AFIH01000001.1| GENE 1667 1664274 - 1664564 246 96 aa, chain - ## HITS:1 COG:SP0276 KEGG:ns NR:ns ## COG: SP0276 COG3041 # Protein_GI_number: 15900210 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 6 94 2 92 92 93 54.0 9e-20 MKESKLTVKLTTIFKKDYKLAMKRGRKLELLDKVITTLALGENLPNENRDHDLHGNWKGY RECHIQPDWLLIYKIEKDILVLTLTRTGSHSDLFAK >gi|333758476|gb|AFIH01000001.1| GENE 1668 1664561 - 1664839 338 92 aa, chain - ## HITS:1 COG:SP0275 KEGG:ns NR:ns ## COG: SP0275 COG3077 # Protein_GI_number: 15900209 # Func_class: L Replication, recombination and repair # Function: DNA-damage-inducible protein J # Organism: Streptococcus pneumoniae TIGR4 # 4 91 2 86 87 59 38.0 2e-09 MAKSTTNISIRMDSELKAEAESLFNELGMNLTTAFNIFVRQSLREGGIPFDVNLRVLNKE TITAMTEAERIAKDSAVKGYTDLDELFADLKR >gi|333758476|gb|AFIH01000001.1| GENE 1669 1665156 - 1665446 256 96 aa, chain - ## HITS:1 COG:no KEGG:PTH_0033 NR:ns ## KEGG: PTH_0033 # Name: not_defined # Def: hypothetical protein # Organism: P.thermopropionicum # Pathway: not_defined # 1 94 1 94 97 110 57.0 2e-23 MPELRFLPAAGKYLKKLKDKGLKEKFHEAIQTILENPFVGEAKKGDLEGIFCLDIFYNKT NYEIAYAVYQEEDQIIVVIMAGTRENFYDSLKRYRK >gi|333758476|gb|AFIH01000001.1| GENE 1670 1665449 - 1665820 361 123 aa, chain - ## HITS:1 COG:no KEGG:Swol_0287 NR:ns ## KEGG: Swol_0287 # Name: not_defined # Def: hypothetical protein # Organism: S.wolfei # Pathway: not_defined # 13 122 15 124 124 98 45.0 9e-20 MKTMMERKASEVKKLSISPKRQITIPQKFYTQLGFSRGAECEIRGKELIIRPLQENGGEF AEEILSDLIKEGFSGEELLRAFRSRQKQIRPAVEEMLKEAKRVAEDKVPYYTMQEVFGER GEK >gi|333758476|gb|AFIH01000001.1| GENE 1671 1665837 - 1665995 98 52 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDKTFLNLDILVRKIKVETKKQRNKETKKKRNKETKKQRNKETKKQRNKDYI >gi|333758476|gb|AFIH01000001.1| GENE 1672 1666129 - 1667004 670 291 aa, chain + ## HITS:1 COG:CAC1622 KEGG:ns NR:ns ## COG: CAC1622 COG2240 # Protein_GI_number: 15894900 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxal/pyridoxine/pyridoxamine kinase # Organism: Clostridium acetobutylicum # 27 291 11 279 290 102 27.0 7e-22 MQKDINEIAQASQATLVQNKNVPILLLSDFPSYGTVALRMASAVLGKLHYDVFSLPTALV SNTLNYGKAEILDTTEYLFHSLSVWKELGFSFSALFIGFVLGETQAEYIYQFAKEEKEKG SYIFFDPIMADHGKLYNGLQKKDIESRKQLMQVADCIFPNKTEACLLADLKTVPDNFNLD EAKELIYYLAQKGAKNICITSMKIDEMPCIFLYEESTKEFHTLPYTERKLNLGGTGDLFS SLFIGKYLQKKNFLSAGEWALQKTNSILDAFQERNHGEKTIPIEEYLPILD >gi|333758476|gb|AFIH01000001.1| GENE 1673 1667085 - 1667750 836 221 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227872128|ref|ZP_03990499.1| ## NR: gi|227872128|ref|ZP_03990499.1| hypothetical protein HMPREF6123_0438 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_0438 [Oribacterium sinus F0268] # 21 221 77 269 269 243 65.0 1e-62 MRKLQDKSTEASGSSVSEEEALSMAKDLESLEQKEQESLDKEYGSADESSTETEANGNAS DAKSGEKSPEAKTEGEEESYPYEDYPYDPKEDRGKVNLDKPDIVVGDKHYATQINDWYMN FQDYEGKTVSIDGYYMNFGGYTLVGRMGPSCPYCTGGYVNFEFKTDLDLSKLKSEESWIR VKGILRKGKYSISNDLSQLIYYIEALDVEELPEVGVDTVTD >gi|333758476|gb|AFIH01000001.1| GENE 1674 1667912 - 1668736 703 274 aa, chain - ## HITS:1 COG:lin1484 KEGG:ns NR:ns ## COG: lin1484 COG1108 # Protein_GI_number: 16800552 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Listeria innocua # 8 272 5 277 292 119 28.0 6e-27 MLNSLLKMFQYDFMIRALVVGGLVSLCSALLGTSLVLKRYSMIGDGLSHVGFASLAIAYA LNFAPMSVSIPVCVVAAFFLLQLEESSKIKGDAATALLCSGALAVGVMTISLTSGMNTDV CNYMFGSILAISPSDLRLSVVLSVVVLFLYIVFYPRIFAVTFDESFAKASGTNTRFYNMV LALLTSITIVLGMRMMGTLLISSLIVFPSITAMRVCKNFLSTILVAALLSIFGFIVGISL SFLHSIPTGASIVIVDMILFFLFLGLEMLRNRKS >gi|333758476|gb|AFIH01000001.1| GENE 1675 1668729 - 1669088 432 119 aa, chain - ## HITS:1 COG:TM0124 KEGG:ns NR:ns ## COG: TM0124 COG1121 # Protein_GI_number: 15642899 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn/Zn transport systems, ATPase component # Organism: Thermotoga maritima # 15 101 121 207 240 84 47.0 3e-17 MEYLKVTGLKKSCFRDLSGGQRQRVLLARALCASEKLLVVDEPVAGLDPLAQKELYEMLD KLNKEKGMTIIMVSHDVKEVVQRAKTILHLDRTQRFFGSAEDYLSSKWGKLLVKEEENA >gi|333758476|gb|AFIH01000001.1| GENE 1676 1669076 - 1669438 194 120 aa, chain - ## HITS:1 COG:lin0192 KEGG:ns NR:ns ## COG: lin0192 COG1121 # Protein_GI_number: 16799269 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn/Zn transport systems, ATPase component # Organism: Listeria innocua # 1 103 1 107 234 84 41.0 4e-17 MSYISLNNVGFSYEGKTVLSDIHFSVEKGDYLCIVGENGAGKSTLLKGLLGLKKASEGSI VFGDGLKANEIGYLPQQTDSQKDFPASCYEVVESGRLNKLSFFLFIERKIRRAWKTLWST >gi|333758476|gb|AFIH01000001.1| GENE 1677 1669439 - 1670539 1352 366 aa, chain - ## HITS:1 COG:SPy0714_1 KEGG:ns NR:ns ## COG: SPy0714_1 COG0803 # Protein_GI_number: 15674772 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Streptococcus pyogenes M1 GAS # 58 362 31 316 322 165 32.0 1e-40 MRLKKCILAGGILLSTAVLFACGNKSGKEAETTAAVTTDTEKSMETEKSTDKPTEGKKLQ IVTTNFPSYDFARAITKEDADVTMLVKPGAETHSFEPSPQDIITIQNADLFIYTGGDSDE WVDGILESVQNKNFHVFKMMDAVNLIEEETVEGMQEEEHEHDHADADHGNEEADHDHEKA DQAEEHEEEGPEMDEHVWTSPKNAITIVEKLEETLSGLDESHKDSFKANSDSYVKELEEL DKSFKEVVDSGKRKEIIVADRFPFAYFCKEYGLSYFAAFPGCSTDTQPSAATIAFLTDKV KEDKIPVVFHIEMGNEDMVNAISKDTGAKKLLLNSVHNVTDSDFKAGKTYVDLMKPNVEA LKEALN >gi|333758476|gb|AFIH01000001.1| GENE 1678 1670564 - 1671004 374 146 aa, chain - ## HITS:1 COG:no KEGG:Trebr_1245 NR:ns ## KEGG: Trebr_1245 # Name: not_defined # Def: ferric uptake regulator, Fur family # Organism: T.brennaborense # Pathway: not_defined # 7 141 7 140 142 126 45.0 3e-28 MAEKTIYKTQHKEELLSYLSTCPGMHFTVSDLVSHFREEGKPIGTTTVYRQLERLCEKGV VNKYIIDQNSPACFEYVGEGEKAEESHSCFHCKCNVCGKLIHLHCHDLEGMMQHLLTHHG FHWDSKKTVFYGLCADCAKKEEQNKL >gi|333758476|gb|AFIH01000001.1| GENE 1679 1670972 - 1671085 59 37 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLGFINGFFSHTFSTSVLPFPILYYSRYRNFFSISYL >gi|333758476|gb|AFIH01000001.1| GENE 1680 1671170 - 1671301 59 43 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDLKKRESAFAILFCYGGRSLTGKIKLERKSALSAVLIHACKR >gi|333758476|gb|AFIH01000001.1| GENE 1681 1671248 - 1671970 873 240 aa, chain - ## HITS:1 COG:L178908 KEGG:ns NR:ns ## COG: L178908 COG2013 # Protein_GI_number: 15672568 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Lactococcus lactis # 1 224 1 224 232 196 48.0 3e-50 MQHQILGDNDCPILEIYLNAGEAVKIERGSMAYMCGVELQGKMNSGSNGGGLGGLLSAVG RSIASGESMFITEARGVMNGGRIGVAPAIPGKIVRLPIGERQYRLNTGAFLAGDYSVGYS MKMQDIGKAFFGGTGGLFVMETEGQGDVFVNAFGDLLELEVHPDCPMTIDNDHVVAWDRN LDYHISVASGTFGFTTGEGLVNRFVGEGKVYIQTRNLSSLASALPLASMNKNSGKGGFSF >gi|333758476|gb|AFIH01000001.1| GENE 1682 1672137 - 1673987 1264 616 aa, chain - ## HITS:1 COG:BH1909 KEGG:ns NR:ns ## COG: BH1909 COG2972 # Protein_GI_number: 15614472 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein with a C-terminal ATPase domain # Organism: Bacillus halodurans # 102 356 343 584 597 127 29.0 4e-29 MKIGVSKTEHKSKSGQGLVRAEKNGLSSLSSRLLRLYALTLALFLLSIFIIYLLLATGGS FFQTGMKLLLLGLLCLCILTLAYFYYDVLRPYKTYQSTLRRVLEGYSEVQELQELPVYLT EESHEEYHYISEILSANKIIEEGEKLAYIQNLQNQMNPHFLYNILENIRSESLLNGLESV ANMAELLGDFYRYTISQEENFVSLKEELDNTEVYFQIQRFRFSKKLELEVKVQEDLLPLK VPRILLQPIVENSIVHGLEGRETGGKVGISISRSNQHVYIQVSDDGIGIEEEKLRQINED LRNIRRGFQGGVVGKRDMGKAGMGVSLLNIQERIHLLYGREYGLYLQSLENAGTDVCMVL PRELSVKQEEESFISESLDLLSEEENALIINTISTKEPEKEELLFALELYLSEGTRFSVE NLSFQLFSGESLLFLALDEAIPKDLVLAFNDEKELYYGSVKSYESMIKTVPKVWMVGDGS SLIEGQTVLSNLFVYQPEYPHFLLRNKELITGYKDLFPELSREIPYQEQVENLEEKQRIL VEIMKGMIAGARVFALWEVHLAKKDEEELYAYIEKWKKEGYAFLFFSSKPSDAEKPCERL GIWKEGRILKIISNSQ >gi|333758476|gb|AFIH01000001.1| GENE 1683 1673968 - 1674708 685 246 aa, chain - ## HITS:1 COG:BH3679 KEGG:ns NR:ns ## COG: BH3679 COG4753 # Protein_GI_number: 15616241 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain # Organism: Bacillus halodurans # 3 237 6 253 257 126 33.0 4e-29 MRVLIADDEERICELIQFLGDFQEEGMECLPFAKTGKEALEMVEKELPELLITDIKMPVF SGLDIAKEIARKKLPTKVIIISAYSDFSYAKEGIQAGVSDYLLKPIKKKELQESVRKIKE ELTGPSLETMMKDMPCSHLVSLSKKYIDRHFEENIGLEEVAEYCKVSASYLSTQFKKELS LGVNKYISGLRMERAKLLLAETNLSITEIASQLFYYDTKYFSKCFFEKMGMNPKDYRNSL HENRSE >gi|333758476|gb|AFIH01000001.1| GENE 1684 1674719 - 1675141 299 140 aa, chain - ## HITS:1 COG:AF0346 KEGG:ns NR:ns ## COG: AF0346 COG2608 # Protein_GI_number: 11497958 # Func_class: P Inorganic ion transport and metabolism # Function: Copper chaperone # Organism: Archaeoglobus fulgidus # 2 105 23 119 204 70 36.0 1e-12 MVSENLMGKVVDEETYYLCMNEDCDVVYYNLNNERVFYKEDVKVPIWFKKDANPKYICYC NQVTEQQIINAVLDDGAKNIKDIIRLTGAMKNGKCEINNPLGKCCSPFIQETINKALKGY KCNIEEQTYSMKRLDVEDES >gi|333758476|gb|AFIH01000001.1| GENE 1685 1675313 - 1675525 214 70 aa, chain - ## HITS:1 COG:SP1030 KEGG:ns NR:ns ## COG: SP1030 COG3655 # Protein_GI_number: 15900901 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Streptococcus pneumoniae TIGR4 # 1 67 1 67 72 57 37.0 7e-09 MAISYKPLWHLLVEREMNKEDLKRAANITSNIVSRMSKNSYVNLESLEKICLALDCRIED VIEIHRNEVE >gi|333758476|gb|AFIH01000001.1| GENE 1686 1675625 - 1676638 330 337 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|116517028|ref|YP_816079.1| glucokinase [Streptococcus pneumoniae D39] # 1 318 1 319 319 131 30 1e-28 MERYYLGFDLGGTKSAVILGRDAGGPIEILKREAIPTFQGNRSPLETIECLCKIGESSLL EKNIQLQSTGVSCGGPLDEEKGLILSPPNLPGYDEIPIKRILEDRFQVPSFLENDANACA LCEWRFGAGQGTKNMIFLTFGTGMGAGLILNGSLYRGSSGMAGEVGHIRLSKGGSFGYGK EGSFEGFCSGNGIKEMARRMYKEREDEGSLEEQDKGIIDFTVKNLASLVKDGSPFAKSVF DRSAYYFGRGLALLIDILNPECIVIGSIYERCEALFKEKVEAVIREECFTESVNLCKIEK SKLSDNIGDYAALSVAMEVQGFGAVPSGTRKKQGLSQ >gi|333758476|gb|AFIH01000001.1| GENE 1687 1676725 - 1677747 1216 340 aa, chain - ## HITS:1 COG:AGc5109 KEGG:ns NR:ns ## COG: AGc5109 COG1879 # Protein_GI_number: 15890064 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 66 340 69 348 357 99 31.0 7e-21 MKKKLILLAALLSAAMLFGCTSDKQDAKDTTAAVTEGTTAAGEEKATEEKAENSGETTVK ADKPYKLALITMDSLDQHWVTLNEGAQAEAKLVGVEVKFMSPDTKDDSKQIECVNNAVAG GVDGIMIAANGPDAISASLKEAQAQGIKIVYVDSPANVDAEASFATNNKQGGKTAGEEMR KALEAQGVTEGTIGIISTNASTQSTVDRDSGFREAFEGSKFTIEETQYCDGDAAKAQTIA ENYITKGVVGIFGANEGSTVGTGNAIKASGDSKIIGVGFDKSDNIKSLIQDGYLLCTMAQ NPDVMGKMGVDALVESLNGKDLKGETVDTGVSVLNKDNLK >gi|333758476|gb|AFIH01000001.1| GENE 1688 1677786 - 1678793 1007 335 aa, chain - ## HITS:1 COG:BH3731 KEGG:ns NR:ns ## COG: BH3731 COG1172 # Protein_GI_number: 15616293 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Bacillus halodurans # 10 320 6 309 314 169 36.0 8e-42 MKNKVKEILRIRGMRGAITAFVGLVIIYVVFGCINDKVFSLQNNLNLLRSMAKYLLIGIG QSFVMITGNIDLSIGSVVGMSAMVTASLMTRGVPIVVALLVSLLIGLIIGYVNGELVGKF QMPPFIATLGTMFVARGIAYLVNGNRNTDNIASILGKDQGKFFQDAFYYGKILGIYTTFW IAFLIFLIFSFILGKTKLGRHIYAVGSNKEASRLSGVDIVSVIKKTYLISAFCSVIVGYI LCAQAGMGNMEAGNMYEMYGVAAGVIGGVSPLGGSGLLLGTFQGALLWQTLENGLNMVGA QVGIQRIVIGVIVVLAVLMDVLVRNGNLFSKKNKQ >gi|333758476|gb|AFIH01000001.1| GENE 1689 1678882 - 1680381 1173 499 aa, chain - ## HITS:1 COG:AGc5112 KEGG:ns NR:ns ## COG: AGc5112 COG1129 # Protein_GI_number: 15890066 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, ATPase component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 5 495 25 516 521 452 47.0 1e-127 MGNSLVQMKNIAKSFSGTKVLKGVNLELGHGEILALLGENGAGKSTLMKILSGIYSKDSG EIYLDGELCHFQNPKEAQNKGVAIIHQEMNLCNDLSVSENIFLGREVMDGLRLNHKKMDE EAQKILDDLGISMKSTELAGDLKVSEQQMVEIAKALSQDAKVLIMDEPTSALSRKEIEDL FRVIRKLRDEGRGIIYISHRLDELRAIADKVSILRDGENVISGDLKDFSIDDIIRHMVGR EIQDKFPRILCEKGKEILRVESLNAGPKVRDISFSLYEGEILGIAGLMGAGRTEMTRALF GVDEKTSGKIYLFGEEVKTNTPKDSIELGMALIPEDRRKDGLCTDLSIRENISLPNLDSM KKSLGVLSKDLELKISEDTIKSLNVKAKDREMISKNLSGGNQQKVVLGKWLVRNPKVILF DEPTRGIDIGAKVEIYQIMNELKKKGVGVLFISSEMEEVLGMSDRILIFCDGRITGELSR EEANQENILKLATRYEEKV >gi|333758476|gb|AFIH01000001.1| GENE 1690 1680534 - 1681655 560 373 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227873220|ref|ZP_03991493.1| ## NR: gi|227873220|ref|ZP_03991493.1| hypothetical protein HMPREF6123_1432 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_1432 [Oribacterium sinus F0268] # 1 373 1 373 373 677 89.0 0 MRTKNIGFRKITGNFWLVSLNNKLRKLVEGYPGVDLANRVLCYGYIDHDAGLSLEVLALS SKNAEEVHVFEPRTDISSKIRIGAVKTGHLYFFEDRDGELRKRFASQIGILDDYAVEEDI QESRRMEVLDIYRSPEYPDDVLVYLLKEGNKPEACWVRIEGLMNNQIIGTLLNEPEQNFS YHVGEKIAFFIHKDENGGIALCSNMNPSQKITAEDLKDGTMLESSIYNFNREKNQDHFLD ILEILRDSYVWVPGVFIMSDTDESRMKDLIEQSETEPQSIVGNTFKTQDQCKFKPDILKY DEDLFFPVFSNPEAMGEYGNQMSKIQQHFLDVITLAANHEQNLSGIVINAFSEPFVLDKD LWDIVKNMKSRLT >gi|333758476|gb|AFIH01000001.1| GENE 1691 1681803 - 1683014 603 403 aa, chain - ## HITS:1 COG:FN1382 KEGG:ns NR:ns ## COG: FN1382 COG1373 # Protein_GI_number: 19704717 # Func_class: R General function prediction only # Function: Predicted ATPase (AAA+ superfamily) # Organism: Fusobacterium nucleatum # 1 400 1 402 402 456 59.0 1e-128 MIQRERYINQIKLFIGKDVIKVLTGIRRSGKSIMLRLIQEEILRQGVTEAQFISFNFESM ENADFCTASSLYQELKRRISSNEGKAYLFFDEIQEVEQWEKCINSVRVDFDCDIYITGSN AKLLSGELATYLGGRYVEFVVFPFSFEEYLESIKQKKEEFSVTEEFKNYLEMGGMPFLVN LRYDKDASMQYLRDVYNSVLLKDVVQRNNIRDVELLERMILYLLDNVGHSFSARSISKYL KQENRKVSSETILNYIKACCDAYLFIKLRREDLQGKKILSINEKYYSVDHGLRESILGSN TRNIDQVLENIVCMELLRRGYTVTIGKNGEKEIDFIASKNKDKLYIQVTYLLAGAETIER EFGIYDSIRDHYPKYVLSLDEFDMSRNGINHLNIKDFLLSKEF >gi|333758476|gb|AFIH01000001.1| GENE 1692 1683194 - 1683619 425 141 aa, chain - ## HITS:1 COG:SP1636 KEGG:ns NR:ns ## COG: SP1636 COG1959 # Protein_GI_number: 15901472 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Streptococcus pneumoniae TIGR4 # 1 141 1 142 145 152 53.0 2e-37 MQVSTKFTIALHILIAVKYFEEEYKLTSDFLSTSIGSNPVIIRNIMSQLREAGIITIKRG PGGIEITKDLKDISFLDIYKAVETGGQGELFNFHEKPNPNCPVGKNIHRVLDESLLEVQK KFEEELKEHSVAEVYERMEKR >gi|333758476|gb|AFIH01000001.1| GENE 1693 1684063 - 1684737 313 224 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|255693751|ref|ZP_05417426.1| ## NR: gi|255693751|ref|ZP_05417426.1| conserved hypothetical protein [Bacteroides finegoldii DSM 17565] conserved hypothetical protein [Bacteroides finegoldii DSM 17565] # 62 222 56 225 226 116 39.0 1e-24 MNYERNLKYFQKVDLKGALIAMTIGAILTLIGFSGSGESLIIGLLLLVGGFFYLKSTLKG IVSDKEYDQSVLSALKDINQKALNKLGLDESEANEISPISFDGYVIKGYDYAKKGEDGKW RTNKYQSTTLFFSANEVHCYTYSYSTTEEKKTESTDVYFYKDIVSVSTASDTIKYPEETK ETEYEYFKLTTTGGTALSVTLRDKDGAQESINNMRKLLKQKKTI >gi|333758476|gb|AFIH01000001.1| GENE 1694 1685050 - 1685208 132 52 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MALITKIKAYREQAGIKQFLIFFLLKYFFDFAKKYPKFYSKGRNGKGRKVLL >gi|333758476|gb|AFIH01000001.1| GENE 1695 1685452 - 1685562 83 36 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFIYHMDFRDEKKEALINIAMVYLSGVRDYRLSPRG >gi|333758476|gb|AFIH01000001.1| GENE 1696 1685620 - 1685988 425 122 aa, chain - ## HITS:1 COG:no KEGG:TDE0520 NR:ns ## KEGG: TDE0520 # Name: not_defined # Def: hypothetical protein # Organism: T.denticola # Pathway: not_defined # 1 76 1 76 195 102 71.0 4e-21 MQMVDNLKQILEYVCENFEDLDMDDPVEEGYLDDYEEILGATEEEISAFEEKLEISLPED VKELYRYKNGSEFFSLSHDFWNLGDRVLNVYPDIESLKEKDAYLAECCESSLSEKPYEFL DI >gi|333758476|gb|AFIH01000001.1| GENE 1697 1685994 - 1687085 529 363 aa, chain - ## HITS:1 COG:no KEGG:TDE0552 NR:ns ## KEGG: TDE0552 # Name: not_defined # Def: ankyrin repeateat-containing protein # Organism: T.denticola # Pathway: not_defined # 1 354 1 354 354 469 63.0 1e-130 MITIKDIGDFESVPGIVSDIINGDTLALDKHLSEGFDIEEDIKLGKYTRISPLDLALIME SFDSVKWLVEKGANLNVKGNPSFLLAVRYCDEEVIRYLVDFGAKVDGVNNVKSEAFSQAL YGGKYDNLALIHELGHRVEKYGGQAFRSAVSDSNYKVLDFFIKNGVDINYNAPDSVYPFK PTPLCVAARYVDLKMCKYLVENGADVTITEKDGMRPYSIAVEKGDEEMAEYFKQLEPEEF HGLHNKLDELKPFKLPKTVMDFLQGEELHFELKDCDFKWIEFFSLVDTVAMKKGRQKFLR LSKATGDYDHVYIVWNPKTKKVAFYDEEHEEMRDMCDFSEFINDMPLYMQKINEGEYEKY NKG >gi|333758476|gb|AFIH01000001.1| GENE 1698 1687105 - 1688169 640 354 aa, chain - ## HITS:1 COG:Cgl0131 KEGG:ns NR:ns ## COG: Cgl0131 COG0666 # Protein_GI_number: 19551381 # Func_class: R General function prediction only # Function: FOG: Ankyrin repeat # Organism: Corynebacterium glutamicum # 1 354 1 355 355 210 36.0 3e-54 MAKKRVTLPKDFDELLKVGDIEALKAVYDKCELTAYDGKFGLHTALHYKGVPDELVIWLV KQGLDVNIPDYYGCTPLYSQATFGMDTVKLLYELGGDVQKPDRYGNTPLHVAAEYFRPNT VRFLIEKGADVNAKNDREETPLLAALTVCGGLRVVPLAQIAEMLIKAGVEITPEMAEKVE IIGKDFEFHRENFSKESLEEADVALSKLYNIFGAKPVTKRIIHDGVSPILVKEGTWKEQY NELWDLLIPSTGAAKTVQGEVIRITGRVDDEINRNGGINWDRSYRNMLNSLPVHFAEGNA LSEKEIEESKELISKIDGKGLAEDGVITRLCELAVSWVILNSNPIPLGEINYNR >gi|333758476|gb|AFIH01000001.1| GENE 1699 1688305 - 1688502 122 65 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227871980|ref|ZP_03990367.1| ## NR: gi|227871980|ref|ZP_03990367.1| hypothetical protein HMPREF6123_0306 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_0306 [Oribacterium sinus F0268] # 7 64 78 135 145 102 86.0 8e-21 MEFIVAEKGTWNPITSRLINIHTGEYASLGDWYNNVKVKENEVELKNDYSGKSMILKNVK ELKWS >gi|333758476|gb|AFIH01000001.1| GENE 1700 1688626 - 1689387 517 253 aa, chain - ## HITS:1 COG:FN0736 KEGG:ns NR:ns ## COG: FN0736 COG0500 # Protein_GI_number: 19704071 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Fusobacterium nucleatum # 1 252 1 251 251 300 57.0 1e-81 MEKQALINQWLLEQEIAHIKGWDFSHIRGRYKEEDDLPWDFENIIKSYLNGTDYLLDMET GGGEFLLSFMANAKYTAAIEGYEPNIKICEDRLLPLGIDFKACDGGDILPFEDNYFDIIT NRHGQYNINEIKRTLKSGGVFLTQQVGAENDRELVELLIGDVEIPFPEAYLSIARQKFTD NGFDIVEADEVYRPIEFYDVGALVWFARIIDWEFPGFEVEKYQDNLFKAQEILDKEGVIK GKIHRYYFVAKKK >gi|333758476|gb|AFIH01000001.1| GENE 1701 1689647 - 1689856 152 69 aa, chain - ## HITS:1 COG:no KEGG:TDE0503 NR:ns ## KEGG: TDE0503 # Name: not_defined # Def: hypothetical protein # Organism: T.denticola # Pathway: not_defined # 1 69 141 209 283 100 73.0 2e-20 MQDDVLGELTYDKQLKSFEGNLSWLGGRIHISLYVDKDNKSGITKAKKAIKTMVLEQEKW DADLRSFAA >gi|333758476|gb|AFIH01000001.1| GENE 1702 1689907 - 1690239 167 110 aa, chain - ## HITS:1 COG:no KEGG:TDE0503 NR:ns ## KEGG: TDE0503 # Name: not_defined # Def: hypothetical protein # Organism: T.denticola # Pathway: not_defined # 1 109 13 121 283 193 84.0 2e-48 MTQSEWENSFEKEEREIIILRHEGGGGSLRNGFWEWEEYFLAYVDCKTGELHKEEGRIAF PVTDTENLPYQFEDETIYRLKVREKVPEEVPNGALPIKNHFLIVEVLEKT >gi|333758476|gb|AFIH01000001.1| GENE 1703 1690341 - 1691258 616 305 aa, chain - ## HITS:1 COG:CAC3514 KEGG:ns NR:ns ## COG: CAC3514 COG3344 # Protein_GI_number: 15896751 # Func_class: L Replication, recombination and repair # Function: Retron-type reverse transcriptase # Organism: Clostridium acetobutylicum # 39 171 51 187 470 147 54.0 2e-35 MAENIENNGCLQRDSAEHEGYAKARRSFNLIWKERDSVQPKLLEAILYKDNFNRAYKRVK ANKGAPGVDGMTIKEALPYLQEHQQELTNRIYHGKYTPSPVRRVEIPKPDGGVRKLGIPT VIDRTLQQAITQQLVPIYEPLFTDGSYGYRPNRDAESSTRYLEEELKLTVNREKSRTVSV FAIRNFKFLGFALGRNRSGIYVRVHAKSWEKFKSKLKELSSRKRCQSINPSLERIKVYAR GWLNYYGIASMKSNMNDINGWLYHRIRMCIWKQWKRVRTRYRNLMGMGVPKDLARTAVSH ASYSI >gi|333758476|gb|AFIH01000001.1| GENE 1704 1691630 - 1691755 58 41 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVNNLSAPKKSASWQVFLIVRLAAHVSNGLKSRIHPVVGRI >gi|333758476|gb|AFIH01000001.1| GENE 1705 1691809 - 1692120 94 103 aa, chain + ## HITS:1 COG:no KEGG:TepRe1_0868 NR:ns ## KEGG: TepRe1_0868 # Name: not_defined # Def: hypothetical protein # Organism: Tepidanaerobacter_Re1 # Pathway: not_defined # 1 103 376 478 569 132 66.0 5e-30 MKKAHNLKTSQAKRSEFGDCSKYVTFIPTDKKGNKEDGKIKVKINEEAVEKAKNLAGYNL IATSELSMTSKEIYDTYHNLWRIEESFRAMKSQLDARPVYLQK >gi|333758476|gb|AFIH01000001.1| GENE 1706 1692580 - 1693371 256 263 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225088774|ref|YP_002660041.1| ribosomal protein S16 [gamma proteobacterium NOR5-3] # 5 220 12 230 312 103 26 4e-20 MDTVLRLTNVNKSFGAHHVLHDVSFEAGRGELIGYIGPNGSGKSTTVKLMLGILGGYTGT IEVFGKNIEEDLVSYKRKIGYVPEILSLYESLTGEEYISFLSSVYELSNWRGRMEELAEI FQINDALTTRISGYSKGMKQKIAIIGSLIHNPDILFLDEPLNGMDTNSVAVFKEVLKTLT KQGKTIFYSSHIMEVVEQMSSRVILLKDGAVIADSTVEELKNNSRGSSMEEIFNDLTGFT KGHDLAAKFVDTLTGGETIEDEK >gi|333758476|gb|AFIH01000001.1| GENE 1707 1693355 - 1695031 525 558 aa, chain + ## HITS:1 COG:no KEGG:CLI_0861 NR:ns ## KEGG: CLI_0861 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_F # Pathway: not_defined # 10 550 6 548 565 204 28.0 6e-51 MKMKNSEPFVLKVVDKCVKPFLSKDLNYGQIREMLRLKLIMDSRRVSPALQNNGKKIGKE PKRSMILTCLVYMGLGIFIAFMQIMPNMFGANTISFAMLIFMLFSVYISEYSSVLLDTTE KSFYGALPIGKNEISTAKNIHIAYYIGTIAASMMLPSIVVGFISKGILYGFAFTLVSIVI VVVCLHLAGVIYYLLLKVFSGEKLKDILSGFQIFMTIAIILSYQIVPRVVSIAGFSKGEL TFSPFYFFLPSAWFSAILESLFGAGGAWYIYVLAGITVPAVILLEVIYRKKAMPEFEGEL DKLTETAKENKTLSAFSNLMCKLLSKDEQENAFMKLVLIQVSRNRDMKLKLYPQLANVFI LPIIMVLPQITGEKGLTGFIENLREGRWGLALLYFTGLTSAAIYGIITQTENKESIMFYQ ILPIENLSKCIRAGVKVVLFRYLTPIFVALSDLLFAVYGIAILPDIVIAYLSFIFVTSLM IRVGTWELPFSSEFNPANVGRGLLLLFMSLFILALFGWTHIFWLKTLELQLIGIVVMILA NLVLWKFFMNKKYIIARG >gi|333758476|gb|AFIH01000001.1| GENE 1708 1695710 - 1695943 84 77 aa, chain + ## HITS:1 COG:no KEGG:Closa_0557 NR:ns ## KEGG: Closa_0557 # Name: not_defined # Def: IS66 Orf2 family protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 61 1 61 118 102 72.0 4e-21 MLNDASGFKHIYLCTGYTDLRRGIDGLIAVVNAGFKLDPRESGSIFLFCGRIGDRIKALL YLLGFFQVFCKKERQKE >gi|333758476|gb|AFIH01000001.1| GENE 1709 1696352 - 1696567 295 71 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_1606 NR:ns ## KEGG: EUBREC_1606 # Name: not_defined # Def: putative reverse transcriptasematurase of intron # Organism: E.rectale # Pathway: not_defined # 5 71 398 464 464 108 76.0 7e-23 MEGKKRVRTRYRNLMSMGVPKDLAWKVANSRRGYWFTTQTVVMNMAMTKERLINSGFYDL ATAYQSVHVNY >gi|333758476|gb|AFIH01000001.1| GENE 1710 1696979 - 1697914 365 311 aa, chain - ## HITS:1 COG:TP0166 KEGG:ns NR:ns ## COG: TP0166 COG1108 # Protein_GI_number: 15639159 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Treponema pallidum # 1 311 30 341 367 186 40.0 7e-47 MVSDAISHSVLLGIVIAFFIVKDVGSPFLIAGAALFGVITVFVVEFLSGTGLVKNDDAVG IVFPMFFALAVVLITKFARNVHLDTDVVLMGEVIIAPLNRVEFIGMSLPKALVQMEILLL INLLFVIIFFKELKITTFDRGFAKLAGFSSVALFYVLMTLSSFTAVTAFDAVGAILVVSF LITPGAAAYLISKDLKVMIAISVGYAVINSIIGYVFSLLMNVSMSGMTAAAAGVTFLLTF LFNREGLITAIFIRLQRKSELKLGLFLNHIGNHSGKKEESEELGLGSIKNHLKWKQAEVD KIAGRLIKKGL >gi|333758476|gb|AFIH01000001.1| GENE 1711 1698033 - 1698911 488 292 aa, chain - ## HITS:1 COG:BS_ytgC KEGG:ns NR:ns ## COG: BS_ytgC COG1108 # Protein_GI_number: 16080127 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Bacillus subtilis # 15 291 17 295 435 180 38.0 3e-45 MFNIDILTSYTFIIVGSGTFLLAAIAGAVGCITVLKGQSLIGDAIGHAAFPGIVLSFMLF MQREPVLLTLGAVVSGTTAFILIQFIKENSKLKLDAILAVVLSSFFGVGMVLKSHIQGNS TYKDAAQSGLSSYIFGQAAYIMKDDVKLIVYVGIPMLVLLILFYKEIKVFLFDEIYASTI GIKTVLLYGIILVMTMGIIATGLKLVGAILISSLLIIPAITALQWSDKFGWVLIIAGVVG GVSALIGTYISTAYEGMSTGATIILIMGSLAIISLVIGPHGMIKNLRMRRQG >gi|333758476|gb|AFIH01000001.1| GENE 1712 1698904 - 1699623 288 239 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225084369|ref|YP_002657150.1| ribosomal protein S16 [gamma proteobacterium NOR51-B] # 1 221 3 222 309 115 31 8e-24 GMEEVIVKVEDLTIAYHDKPVLRDCDIDIMAGSVTAIIGPNGAGKSTLIKGILGLQKKLA GEILIMGEPIKKVQKKIAYIPQTSEVNWDFPTTVMDVVLMGRYVHLGWFRHPGWEDREKA EAALKRIGMYEFKNRQISKLSGGQRQRVFIARLIAQEAEIYFMDEPLAGIDKVTEKVIID FIKEEQKKGKTAVIVHHDLATIREYFDHVVIINKKVVAEGRVSEAFTNENLEKAMMKNV >gi|333758476|gb|AFIH01000001.1| GENE 1713 1699636 - 1699989 243 117 aa, chain - ## HITS:1 COG:FN0668 KEGG:ns NR:ns ## COG: FN0668 COG0803 # Protein_GI_number: 19704003 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Fusobacterium nucleatum # 1 117 200 312 312 99 45.0 1e-21 MITPHDAFNYFSRRYGIEVVAPQGVSTDSEVANKDIDKTVDFIVKHKVKAIFAESTTDPA RMEKLKEACRAKGFDVKVVSGEGNELFSDSLAPEGQSGDTYIDMYKHNIKLITENLK >gi|333758476|gb|AFIH01000001.1| GENE 1714 1700058 - 1700429 201 123 aa, chain - ## HITS:1 COG:FN0668 KEGG:ns NR:ns ## COG: FN0668 COG0803 # Protein_GI_number: 19704003 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Fusobacterium nucleatum # 1 117 52 169 312 74 36.0 4e-14 MVNQLAGDMVDKELIIPAGEDPHLYVAKPEDLRKIAEADLVLFHGLHFEGKMQEVLEKKG YAVASTFSEDKIGKMEEDGAAIIDPHFWFDIDLYKEATENAGAKLSELLPDKKDEIEKIP KLM >gi|333758476|gb|AFIH01000001.1| GENE 1715 1700456 - 1700554 87 32 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTSKKDEGSKSTMISGAMGGSGKTDSQMTKKK >gi|333758476|gb|AFIH01000001.1| GENE 1716 1700937 - 1701260 316 107 aa, chain - ## HITS:1 COG:CAC3514 KEGG:ns NR:ns ## COG: CAC3514 COG3344 # Protein_GI_number: 15896751 # Func_class: L Replication, recombination and repair # Function: Retron-type reverse transcriptase # Organism: Clostridium acetobutylicum # 7 104 373 470 470 88 37.0 3e-18 MHEDARGWLNYYGIASMKSNMNDVNGWLYHRIRMCIWKQWKRVRTRYRNLMSMGVPQDLG WKTANSRRGYWFTTHTVVMNMAMTKERLINSGFYDLATAYQSVHVNY >gi|333758476|gb|AFIH01000001.1| GENE 1717 1701614 - 1701853 158 79 aa, chain - ## HITS:1 COG:SA0314 KEGG:ns NR:ns ## COG: SA0314 COG2110 # Protein_GI_number: 15926027 # Func_class: R General function prediction only # Function: Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 # Organism: Staphylococcus aureus N315 # 1 77 187 261 266 82 51.0 1e-16 MKSCYRACLTKATEAKCKSIAFCCISTGVFMFPKDKAAEIAVSTVREWLDAHPESTVERV IFNVFTDEDREIYEELLKG >gi|333758476|gb|AFIH01000001.1| GENE 1718 1701917 - 1702402 419 161 aa, chain - ## HITS:1 COG:SA0314 KEGG:ns NR:ns ## COG: SA0314 COG2110 # Protein_GI_number: 15926027 # Func_class: R General function prediction only # Function: Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 # Organism: Staphylococcus aureus N315 # 6 161 10 163 266 132 42.0 2e-31 MTQGERRVWLIQELQKEMPEYAHYPIPKTSEEQWRLLRGLFNVRKPKEASEDFLKMQDSF LQEMTREKGVVDGDSLEATALDKRLVLWQGDISTLKVDAIVNACNSALLGCFIPNHNCID NVEHSMAGVQMRYACFRQMQEQGHEEATGQCKITPGYNLPA >gi|333758476|gb|AFIH01000001.1| GENE 1719 1702567 - 1703514 804 315 aa, chain - ## HITS:1 COG:SA0315 KEGG:ns NR:ns ## COG: SA0315 COG0846 # Protein_GI_number: 15926028 # Func_class: K Transcription # Function: NAD-dependent protein deacetylases, SIR2 family # Organism: Staphylococcus aureus N315 # 20 313 19 296 315 189 37.0 5e-48 MFFFNRNTIQHPGENVPYEEQVLNLKEKIQNAEAIVLGAGSGLSTAAGFTYSGERFQKYF FDFAKKYPIQDMYSGGFFPFESPEEFWAWWSRNIYFNRYIDIHSDVYGNLKKIVEGKDYF VLTTNVDHQFQKAGFEKERLFYTQGDFGLFQSTRPTVAKTYDNREIVEKMLEAQGFVRDD AGIFQLPEDKKLKMSIPTELIPICPDDGLPMTMNLRIDETFVEDAGWKMAAKRYQDFLHS HSRKHVLYWELGVGMNTPVIIKFPFWRYTEENPNAYYACLNLGEAGCSENIVERSICLNA DIAKVLRDLLKKDLK >gi|333758476|gb|AFIH01000001.1| GENE 1720 1703653 - 1704288 713 211 aa, chain - ## HITS:1 COG:SP1627 KEGG:ns NR:ns ## COG: SP1627 COG2910 # Protein_GI_number: 15901463 # Func_class: R General function prediction only # Function: Putative NADH-flavin reductase # Organism: Streptococcus pneumoniae TIGR4 # 3 209 2 207 209 229 56.0 3e-60 MAKIAVVAANGKAAKKIITEAVNRGFEVTAFGRRAENDTDAKNYIQKDILDLTREDLKGY DAVVDAFGAWTAETLPLHSKTTEHLANILSGTNVRLLVVGGAGSLYVNPEHTIQVADGEN FPEAFKPLAQAMAAALSELRERKDVQWTYISPAADFQAEGERSGKYILAGEEFTLNPAGE SVISYADYAIAMVDEIESGKHIQERISVVRA >gi|333758476|gb|AFIH01000001.1| GENE 1721 1704728 - 1705078 199 116 aa, chain + ## HITS:1 COG:no KEGG:CJJ81176_pTet0052 NR:ns ## KEGG: CJJ81176_pTet0052 # Name: not_defined # Def: cpp4 # Organism: C.jejuni_81-176 # Pathway: not_defined # 41 116 1 76 76 126 96.0 3e-28 MQDQTIVLEFEDGYKKLTETFEQVEGNITIEGVDFDFTSVMLQSKWGNYGKFNGEKLELE HFIKRYKNYNFEIVDELYGYNQVLYSGYLSILETEDLVQMDISIYFTGRIIYDTKE >gi|333758476|gb|AFIH01000001.1| GENE 1722 1705232 - 1705465 209 77 aa, chain - ## HITS:1 COG:no KEGG:Fisuc_2057 NR:ns ## KEGG: Fisuc_2057 # Name: not_defined # Def: hypothetical protein # Organism: F.succinogenes # Pathway: not_defined # 4 74 1 71 84 68 43.0 5e-11 MAELSISKERLNYTIDLLVTMAVEEISSFIGKDSKEVLVDFLASKTGKALYDDTTKLWWT GPSYLAEMYLEEIAVKQ >gi|333758476|gb|AFIH01000001.1| GENE 1723 1705453 - 1706019 280 188 aa, chain - ## HITS:1 COG:no KEGG:Fisuc_2056 NR:ns ## KEGG: Fisuc_2056 # Name: not_defined # Def: hypothetical protein # Organism: F.succinogenes # Pathway: not_defined # 4 187 5 187 187 197 50.0 2e-49 MLELKESLILYHGSYCEVLSPNLRKCAKMKDFGQGFYLTSSKEQAESFLKISINKARAFG RIEDKQNYGYVSIFEFSPLKQLNIHVFPEANVDWLHCIAAHRKNTFFLEEERKLRNVDII IGKIADDATNASLTAYLAGAFGIVGEKEADEFCIRQLLPNKLKDQYCFKTEEALSCLKFI ESEKIWLS >gi|333758476|gb|AFIH01000001.1| GENE 1724 1706012 - 1706236 230 74 aa, chain - ## HITS:1 COG:no KEGG:Fisuc_2055 NR:ns ## KEGG: Fisuc_2055 # Name: not_defined # Def: hypothetical protein # Organism: F.succinogenes # Pathway: not_defined # 1 69 1 69 73 77 55.0 2e-13 MSEKEEILFMQTRLIRLAAEEWELSMDKVLSLFKQAKVLDYIEKAYGIFHCEGDEAVLQD IEEYLDAKGLKIHA >gi|333758476|gb|AFIH01000001.1| GENE 1725 1706281 - 1706472 198 63 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227873248|ref|ZP_03991518.1| ## NR: gi|227873248|ref|ZP_03991518.1| conserved hypothetical protein [Oribacterium sinus F0268] conserved hypothetical protein [Oribacterium sinus F0268] # 1 63 344 406 406 85 69.0 1e-15 MDALANLMESSKKSAIQHMKDGGQAVLNQIQSSGQALLSQMKTGGHAAIHQVLGKTKEEG EQV >gi|333758476|gb|AFIH01000001.1| GENE 1726 1706460 - 1707500 900 346 aa, chain - ## HITS:1 COG:no KEGG:EUBELI_01577 NR:ns ## KEGG: EUBELI_01577 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 5 346 6 348 365 244 37.0 6e-63 MELLDYLKWRNDVPLSVSPFNEVDNVIFSYLSYIDFRDLREDWNGFFDLKELFQDFCEKH SLEEIQTTGEFTERAPLLLKEMMEGERFSATKAGYYAEDFDKDKVKQFAALVFLLPDGRN YISFRGTDKTITGWKEDFLMSCQSETAGAKEAVAYFNKIAPVLEGELILGGHSKGGNFAM YAAAFCEAEYKERIVQVYNNDGPGFREEVIQSPEFQELLPKIITIAPQSSIIGQLLSNPA KQHVIHSTAKGILQHDAMTWEAEKDRLVPSELDELSQYAKTTLGSWLESMDDESRESLCT TAFSLIESTNSETFIEFSGNLMKNMETIWKEMGKLPEDKKKKSWML >gi|333758476|gb|AFIH01000001.1| GENE 1727 1707532 - 1707879 187 115 aa, chain - ## HITS:1 COG:no KEGG:Dred_0028 NR:ns ## KEGG: Dred_0028 # Name: not_defined # Def: hypothetical protein # Organism: D.reducens # Pathway: not_defined # 7 113 143 249 258 85 42.0 4e-16 MTSCLDGRVEESGYSVLRPEYLILFKAKAYLDLSSRKLHGERIDSFDIKKHKNDVLRLAV EMALNPIKELPLSVYEDIGFFISKLKEDEFDDNSLKTYRVTTEQVIHRLKSIFNV >gi|333758476|gb|AFIH01000001.1| GENE 1728 1707851 - 1707958 108 35 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVTGLLKFRDYFKGYTGSYVLIGGAACDILFGWKS >gi|333758476|gb|AFIH01000001.1| GENE 1729 1707952 - 1708899 462 315 aa, chain - ## HITS:1 COG:no KEGG:Elen_0853 NR:ns ## KEGG: Elen_0853 # Name: not_defined # Def: hypothetical protein # Organism: E.lenta # Pathway: not_defined # 1 310 1 317 329 150 31.0 9e-35 MKDFLEKRLGIEIMLEDINFEDRLPLLYISLYTFKLVQTYGVEWIIIIPKEQVHLSKLRK QHKQIEKILNLHCAFYLRVGNLYSINTMISEGIPFFIENREIYLPFLGILLQANSEREIK PIQRLSYLCQKLILTAIYEDWNEINVSKTAEKLEITKMSASRCFDEIEFLEMPILGLKGR SRVINIPEDKKALWEDLENFMRTPVISTFYFADDLQLPIKGGMSALAEYSNIEDNAYPSY IVAKKDMNRLGIKNRPISGKIDMPGSMVQELGYMLFYKAGNIMDPLSLQLSLSAEEKEDY RIGKAVKEMLEEYVW >gi|333758476|gb|AFIH01000001.1| GENE 1730 1709075 - 1709833 855 252 aa, chain - ## HITS:1 COG:Cj1541 KEGG:ns NR:ns ## COG: Cj1541 COG1540 # Protein_GI_number: 15792849 # Func_class: R General function prediction only # Function: Uncharacterized proteins, homologs of lactam utilization protein B # Organism: Campylobacter jejuni # 2 251 3 252 255 270 53.0 2e-72 MKVDLNADVGESYGRYTLGLDEELIPLISSANIACGFHAGDPVVLEKTVGICEKAGTAIG AHPGFPDLQGFGRRNMNLSVKEVKAMMLYQIGAVDAFLHKNGGKLQHVKPHGALYNMAAK EESLAKAICEAVLEYDKSLIILAQSSGTLYKEAVKLGLPVRAEVFMDRAYEEDGSLVART KEGAMITDEDLAINRVLSMILKGKVKAISGKEIPIQADSVCVHGDGEKAVLFVKKLRAAL MENGVEIRKLKG >gi|333758476|gb|AFIH01000001.1| GENE 1731 1709840 - 1711189 1416 449 aa, chain - ## HITS:1 COG:CAC3570 KEGG:ns NR:ns ## COG: CAC3570 COG0439 # Protein_GI_number: 15896804 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxylase # Organism: Clostridium acetobutylicum # 1 443 1 443 447 509 56.0 1e-144 MFKRVLVANRGEIAVRVIRALRALSVSSVAVYSKEDQDALHSRLADERVCIGEGSARNSY LNMDTILTVAKNMGCDAIHPGYGFLSENASFAKKCEENGIVFIGPTAEVIDSMGNKSQAR AKMRAAGVPVVPGSLSVLYDVKEALEEAKKMGFPVMIKASSGGGGKGMRECFGEEDFEKD FLTAQRESANAFSDDAMYLEKLILEPRHVEVQIMGDNFGNVVALGERDCSIQRNHQKLVE ESPSPIVSPETRKKMMEAAVKAAKSVQYTGAGTIEFIMDKSGEFYFMEMNTRIQVEHGVT ELLTNTDLVMEQIRVAAGEPLSLKQEEIPFLGHSIECRINAEIPEKNFMPSPGKITALHL PGGNGVRVDTALYTGYNIPMEYDSMIAKVLVLGRDRNEAIRKMKVALEEMLVLGVETNLD FQYKIMQSEAFREGKVDTGFVERFMLSGK >gi|333758476|gb|AFIH01000001.1| GENE 1732 1711243 - 1711698 587 151 aa, chain - ## HITS:1 COG:aq_1363 KEGG:ns NR:ns ## COG: aq_1363 COG0511 # Protein_GI_number: 15606559 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxyl carrier protein # Organism: Aquifex aeolicus # 1 148 1 150 154 94 37.0 8e-20 MLDLEKLEGLVKIMEGSTLNTMSIKDGDFKIMMSKLDNPPIVAGSGVVSSISAVSSDSGV SNSSTENTEEEKEVHITSPIVGTFYSAKGPTIPAFVKVGDTVKAGDTVCILEAMKMMNEI TADFDCEIEAVLVSNEQKVEYGQPLFRVRKL >gi|333758476|gb|AFIH01000001.1| GENE 1733 1711725 - 1712732 980 335 aa, chain - ## HITS:1 COG:FN0436 KEGG:ns NR:ns ## COG: FN0436 COG1984 # Protein_GI_number: 19703774 # Func_class: E Amino acid transport and metabolism # Function: Allophanate hydrolase subunit 2 # Organism: Fusobacterium nucleatum # 4 312 5 311 336 273 45.0 4e-73 MGFRVIKGGLLTTVQDFGRSGFQAQGFNVNGVMDRRAFRIANLLLDNPENEAVLECTLIG PTLEFTAPMIISITGGDFRPELNDEKIPMYTAIYVAEGDVLKIGSARTGRTCYIAFSNYL KVPVVMGSRSTNLKCQIGGFKGRKLEDGDFIETRINRRIYLSSFLSRTLPLKEYEEDKVK IRVVMGPEEEVFSKKGIRSFLETEFTVGAEFDRMGMRLEGSFIETKHGSDIISDGIALGS IQVPSHGKPIILLADRQTTGGYGKIATVISVDLPKLVQRRMDDKIRFEAVSVQEAQKLML QEERELQEMRKAIHKPCKEVLECRLAAKRLSMLFG >gi|333758476|gb|AFIH01000001.1| GENE 1734 1712734 - 1713459 756 241 aa, chain - ## HITS:1 COG:FN0437 KEGG:ns NR:ns ## COG: FN0437 COG2049 # Protein_GI_number: 19703775 # Func_class: E Amino acid transport and metabolism # Function: Allophanate hydrolase subunit 1 # Organism: Fusobacterium nucleatum # 4 239 18 254 262 226 47.0 3e-59 MEKVRVVAAGDSAILILFKQEISEEVNRAISATVQLIKMQQIEGIVDMIPAYASLLVEYN PLVIRYEELYKRLHSIVKMDTQVESLEKKIWEIPVCYGGEFGPDLSFVAENSGYSVEEVI KRHSRDAYLIYMLGFLPGFTYLGGLEEKLHTKRLDNPRLCIPAGSVGIGGSQTGVYPVDS PGGWRLIGKTPVKMYDPAKQDPILTRAGEYIRFCPISLKEYWEIEEAVAKDEYEVKWYKG E >gi|333758476|gb|AFIH01000001.1| GENE 1735 1713596 - 1714789 1614 397 aa, chain - ## HITS:1 COG:FN0438 KEGG:ns NR:ns ## COG: FN0438 COG1914 # Protein_GI_number: 19703776 # Func_class: P Inorganic ion transport and metabolism # Function: Mn2+ and Fe2+ transporters of the NRAMP family # Organism: Fusobacterium nucleatum # 1 394 1 390 395 369 59.0 1e-102 MKAKAKSGALLGAAFLMATSAIGPGFLTQTAKFTGDFQASFGFVILISVILSAIAQLNIW RVLCVSGMRGQDVGNRLLPGLGYFISFLIVLGGLVFNIGNVGGGALGIQTTLGIPVQISY FIAGGLAVLVFLSKDAKGIMDKLVKILGGIMIVVILVVIFIVKPPVATAVKNSFVPDAGL GTLVPAILTLLGGTVGGYITFAGAHRLIDAGVTGEEKLKDIQYSAVMGMIVAAIVRILLF LAVLGVVVKGVTLDAGNPAADAFFQGAGEIGRRFSGLVLTCAAITSIIGAAYTSVSFLKT FSSKIAEKDNLWTIAFIVISTLVMAFLGKPATLLVLAGALNGLILPVTLGVCLVASQNKK IVGENYKHPKLLFILGIVVVVLAAYVGIRSLSALKLF >gi|333758476|gb|AFIH01000001.1| GENE 1736 1714983 - 1715774 677 263 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227872899|ref|ZP_03991203.1| ## NR: gi|227872899|ref|ZP_03991203.1| hypothetical protein HMPREF6123_1142 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_1142 [Oribacterium sinus F0268] # 67 235 20 188 224 79 37.0 2e-13 MGIQGVNRGQGSLYKQIDKKVVGYGQNGEYKTAEFHILQKKDTFTLSEGYKSHVEKAKTP EITGEGESVSVNSSFSAVLKEDKNQRNWKITFESPDDLTSIAEDGYVEVNGKKIILTEQE KKDFKKVAEDVKKFNELKSKFSDALKQASEGKEQAEAANEAFKVQMNVLKITLLYGSGKA VSPKDLNYLREKDPKMYSLAVNMRAMQMKIEEDKKKKSVIEEENDSSDEHIDAIEYDEDK IELNIDTNENKVSVKTVSEKVMS >gi|333758476|gb|AFIH01000001.1| GENE 1737 1716085 - 1716540 220 151 aa, chain - ## HITS:1 COG:CAC3531 KEGG:ns NR:ns ## COG: CAC3531 COG1943 # Protein_GI_number: 15896768 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Clostridium acetobutylicum # 7 151 5 149 157 194 64.0 7e-50 MAKKEYALAHTKWMCKYHIVFTPKYRRKIIYYQYKADIRDIIAQLCRYKGVEIIEGHLMP DHIHILVSIPPKISISSFMGYLKGKSALMIFDKHANLKYKFGNRHFWAEGYYVSTVGLNE ATIKKYIQDQEKHDIAMDKLSVKEYEDPFKG >gi|333758476|gb|AFIH01000001.1| GENE 1738 1716779 - 1718722 1742 647 aa, chain - ## HITS:1 COG:no KEGG:Closa_2778 NR:ns ## KEGG: Closa_2778 # Name: not_defined # Def: ADP-ribosylation/Crystallin J1 # Organism: C.saccharolyticum # Pathway: not_defined # 376 638 69 309 449 79 28.0 6e-13 MDEKGIKARLKMAEGLRNSILAFSDHRDQEHLNLVFQAMEELVLKAGGLLLAADPAGEKE GQQQITLKFLKSEDGKSFAAVFTDEEEKRGDDAENANALLLPAGELLNIVANHPTADGLV INPFSNSFIMQKEAIQALYNKIRTDSVEEKLKDSIGISQAISQYYEEQQKYTESEMPEEM RRAGIEKVLQAFLQGMEKNAQLLVAIVPPEKKEGEVMDGQVLFNHLSTSDGRDAIAVFTS GEEVRKNKEATAAIAMPVIEVLKAAVHISELGKMDGMIINPWSQSFFLSLNLIKWLVDAR ERRDKLSKENEEKKSLTKDLSQNMIFSSLIGGSLGLAKERALIEKPPFGKEAFSFRPTIN SIVLSEFHSLNTEKRLSLQDIMEKMYDWKSKGSYLLDGRVEDSVEAIEAAIMRYATGKKP GELGSNLADDSVLCRILPFSLLLCRRLHQFSDLDRAMLHDNAKLTHNNPVALLMAELYSY ILRNLVLHIGGESLEEELSAAASYVGLFYEEAEAEDEEEARMNEEAKEQHREDVKDYDLL IAEYDRLLPFMNVEEIKAKKEEELVLDGSAEHSLYAALWVLLHTASYQKAVEKAVELSGG KNLPILVSTLAAAHYGFTAIPKDWLENLSGKEEAYELAMEWQQRWLN >gi|333758476|gb|AFIH01000001.1| GENE 1739 1718808 - 1719668 581 286 aa, chain - ## HITS:1 COG:STM4102 KEGG:ns NR:ns ## COG: STM4102 COG0668 # Protein_GI_number: 16767368 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Salmonella typhimurium LT2 # 32 278 27 273 285 168 36.0 9e-42 MVSETVSQIENELRVWSFQNFGNGIALGLGRFMGKLLFALLIFMIGRYCIRKVMKFLPKL RFLERVNPTIRPFFLKSIRFILYFFLGISCIGILGIPMASVITLLASAGVAVGLAMQGSL SNLAGGIMLLLFRPFQVNDYIKSGTDEGTVQEVSVFYTIILSPDNKKISIPNGNLMNSNI INYSSEAQRRVDLIFSVAREEDVERVEKVLKSAIEGDARILHKPEPFFGIAEVKSDSLNF AIRVWVDNKRYWDVYNTLNKRVMIAFYRENIAMPNTKLKTVSPETE >gi|333758476|gb|AFIH01000001.1| GENE 1740 1719861 - 1720343 473 160 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227872108|ref|ZP_03990481.1| ## NR: gi|227872108|ref|ZP_03990481.1| hypothetical protein HMPREF6123_0420 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_0420 [Oribacterium sinus F0268] # 6 159 4 169 170 108 40.0 1e-22 MENAFSMILAGGVIILILVFAILIAFYVLESMALYTIAKNNGQQDKAVLAWIPFINQGFY GFLAGDQNIFGTTVQGIILGILMIIFPILTSRVNGFLFYIVGLCGIAVAYFTLLGLYKKL NNSGDPTVMAVVSAILPPVRIIYVFVHRNDTLTEEGEVVG >gi|333758476|gb|AFIH01000001.1| GENE 1741 1720613 - 1721641 1004 342 aa, chain - ## HITS:1 COG:no KEGG:Closa_2430 NR:ns ## KEGG: Closa_2430 # Name: not_defined # Def: G3E family GTPase-like protein # Organism: C.saccharolyticum # Pathway: not_defined # 3 342 5 317 317 284 42.0 5e-75 MGENYQGDGIPVFLINGFLESGKTSFIQYTMNQEYFQTNGNTLLLLCEEGEKEYDPIELA KLHTTPIYMSDITDFQEEKLRKLADTYKPERILIEWNGMWNQDDLYGGPMSEAVLSEQQN REPKYTVSMPKEWFLYQVITIVDGSTLKMYLSNMRSFLGQMLRNAELCIVNRCDNLSNEE MIDYRRKLRAMGQNAMIMLEDKDGEIPQSALPEELPYDLNQEKIAIADTDYGTWFLDCMD NPERYLGKELSFTAMVLKRKNMPADEFIPGRMAMTCCAQDMSFLGFICKGNKDMLSAFST RDWVKVTVKVALEEREEYHGVGPVLKLVDIVRTGEISEPVNF >gi|333758476|gb|AFIH01000001.1| GENE 1742 1721652 - 1722899 1275 415 aa, chain - ## HITS:1 COG:FN0779 KEGG:ns NR:ns ## COG: FN0779 COG0523 # Protein_GI_number: 19704114 # Func_class: R General function prediction only # Function: Putative GTPases (G3E family) # Organism: Fusobacterium nucleatum # 3 197 2 193 294 131 35.0 2e-30 MTQIDIISGFLGAGKTTFIQKLLQESLKGENVVLIENEFGEIGIDSGFLKNSGIEIREMN QGCICCSLVGDFETSLKEVIETYKPDRILIEPSGVGKLSDILSAVKTVSANLPVHLDGAV TVVDSTKAKLYNKNFGEFFDDQIRYATSIVLSRTDIATEEKVEEAIRIVRALNPKANLIT TAIKELSGEKLLEIIGQEENLEEALLQEVKEKAHHHEHHHHGHEHHHDEHCHCHHEEEEQ EHHHEHHFGNEEEHCCCCGGAYDDEDEEESLEHEHHDEHCACSHDHEHEHHDDHCSCGHE HHDHHDHEHHHHGEHCSCGHDHDADEIFDSIGVEVFKKVSRARLAEILEEMAEGSSYGGI VRAKGMLQLEDGKWVNFDMVPEQVEIRDGEPENIGKFVVIGTELEKEKIKALFTA >gi|333758476|gb|AFIH01000001.1| GENE 1743 1723030 - 1723785 717 251 aa, chain - ## HITS:1 COG:TP0554 KEGG:ns NR:ns ## COG: TP0554 COG0546 # Protein_GI_number: 15639543 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Treponema pallidum # 1 244 1 220 222 131 31.0 1e-30 MKKKIKAVFFDLDGTLVNTLASLKKTMDLSMEHFELEGVSLQETRFFVGTGYRKFVEKAL AKNADKKYREAEKWEEKDEEKAMDLDMEGDEIMGLYDEVCEYYASIFPENSTYRAEAYPG VKECIAALKEKGIQIACITNKSREVAEQVLSAVFPKNFFSLIIGDDGKMPLKPDKAPLLK ACEELGITKDEAVMVGDTKTDLDAAKNAEMSRIGCLYGFRDKKELVEHGAEYLVEDGFAL LRVLEEEFEPG >gi|333758476|gb|AFIH01000001.1| GENE 1744 1723920 - 1724642 424 240 aa, chain + ## HITS:1 COG:CAC2551 KEGG:ns NR:ns ## COG: CAC2551 COG3341 # Protein_GI_number: 15895813 # Func_class: R General function prediction only # Function: Predicted double-stranded RNA/RNA-DNA hybrid binding protein # Organism: Clostridium acetobutylicum # 4 236 6 237 240 114 32.0 2e-25 MGAYYAVKIGKNPGIYLNWEDCKNQVHGFPGAIYKKWKTREEAEQYLRGGSEIPLSPSVS FPTFKTSSCSDKNAELLSILSGEKQVPEEEQAECLLRKFNTDALAFVDGSFQKETGVYGY GVVLIEKNGILSKHKGSGNDDAFLEMRNVSGEILGAMRAVELTLEKGLSSLTIFHDYRGI SAWAKEEWKCNKEKTREYRDYMKTAEKKIRLEFFKVPAHSGIYFNEMADGLAKEAVGIKN >gi|333758476|gb|AFIH01000001.1| GENE 1745 1724782 - 1725789 900 335 aa, chain - ## HITS:1 COG:FN0776 KEGG:ns NR:ns ## COG: FN0776 COG2502 # Protein_GI_number: 19704111 # Func_class: E Amino acid transport and metabolism # Function: Asparagine synthetase A # Organism: Fusobacterium nucleatum # 9 335 3 327 327 397 59.0 1e-110 MALIIPEHYDPRLSVRETQEAIKYIRDTFQKEFGKEMNLSRISAPLFVEKSSGLNDNLNG VERPVSFDVPWKPGETIEVVHSLAKWKRLALKRYHFEAGEGLYTNMNAIRRDEDLDNLHS VYVDQWDWERVISKEERNEEMLRETVRNIFRIIKHMEHEVWYKYPQAVKKLPEDIYFIDS EELLQKYPTLSAKERENAITKEHGCVFIQKIGDKLSNGEPHDGRAPDYDDWNLNGDILFW FEPLNCALEISSMGIRVDEESLRRQLALSHKEERAALPYHRMLLEGKLPLTIGGGIGQSR LCMLLLERAHIGEVQASIWPEEMREECERHNMILL >gi|333758476|gb|AFIH01000001.1| GENE 1746 1725994 - 1726299 280 101 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227872101|ref|ZP_03990474.1| ## NR: gi|227872101|ref|ZP_03990474.1| hypothetical protein HMPREF6123_0413 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_0413 [Oribacterium sinus F0268] # 3 101 8 106 109 142 71.0 6e-33 MGERLGWLSPLGDFYETDWGKHGEEAECILQKIGLYASFSKQTVLNAGDYLSGRGYLLLH NPSRKKLMITHLCPLSDKQRDFLYGYFYDLGEKAEAEKYLD >gi|333758476|gb|AFIH01000001.1| GENE 1747 1726456 - 1727712 1300 418 aa, chain - ## HITS:1 COG:L186490 KEGG:ns NR:ns ## COG: L186490 COG4260 # Protein_GI_number: 15673331 # Func_class: S Function unknown # Function: Putative virion core protein (lumpy skin disease virus) # Organism: Lactococcus lactis # 15 414 1 381 389 203 32.0 5e-52 MGLLRAAETSFKTLLGDQWREYFYCNSLDNDTLIVKGEKRVGEKSSNTKGAENIISNGAL IAVNDGQCMIIVEQGAIVEVCAEPGEFVFDSSTEPSIFYGNLGENLVNSFKTFVKRFAFG GDTAKDQRIYYFNTKEILGNKYGTANPIPFRVYDKNIDLDMEIALRAHGEFSFRMMDPIL FYKNIAGNVENSYKKSEIESQLRSELLTKLQPAFARIAESGVRYYQITAHTDELGQILNE MLSKSWGKHYGLEITAFGMSSVTAPEEDVEKIKELQKNAVFRNPTMAAANLTSAQADAMR AAASNENAGPMMAFAGMNIANQAGGFNAGNLYAMGANQNGAQGSSAGNGAASAGNPSAQA EASPAAVGWTCTKCGHEHNLGKFCSECGTAKEEEWICPECGHTGNLGKFCSECGHKKE >gi|333758476|gb|AFIH01000001.1| GENE 1748 1727997 - 1729319 821 440 aa, chain + ## HITS:1 COG:BS_yubG KEGG:ns NR:ns ## COG: BS_yubG COG0168 # Protein_GI_number: 16080162 # Func_class: P Inorganic ion transport and metabolism # Function: Trk-type K+ transport systems, membrane components # Organism: Bacillus subtilis # 1 420 9 426 445 240 35.0 4e-63 MRFFRLNYFQKIILGFAALILFGAFLLMLPISSNERVYTPFLNALFTSTSASCVTGLIVY DTAVHWSFFGQVVILILIQIGGLGVAVAVSSLILLSGKRIGYSQRNTLANSISISSQGGI MKMLIFLLKWTGVIEFFFAILLATQFIPEFGWRRGLWYSIFHSVSAFCNAGFDLMGIKAP YSSLTDYAENPIVNLSIMALILLGGLGFMTWQDIAKNKGNLHRYRLQSKIILSTTFFLVL LPALFYFFVEFRELPMESRILASFFTAVTPRTAGFNTVDFSKFSDSGIFLQTLLMLVGAA PGSTGGGMKITTMTVLFLTSVAIFRNNSRTEAFGRTIPGEVIRNATTIAFMYICLCVLSG MFISLHENLPLLTTSFETASAIATVGLTLGITPKLSPVSHVVLISLMYIGRVGGLCLIYA VFPNANPNKGRLVEENVIVG >gi|333758476|gb|AFIH01000001.1| GENE 1749 1729391 - 1730044 743 217 aa, chain + ## HITS:1 COG:SA0939 KEGG:ns NR:ns ## COG: SA0939 COG0569 # Protein_GI_number: 15926674 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transport systems, NAD-binding component # Organism: Staphylococcus aureus N315 # 2 211 3 212 220 143 36.0 3e-34 MKQILIIGLGRFGLHVAKKLNEMHIQVLGVDSSEERVKAALPHVTNAEIGDASNQEFLKS LGVSNFDVCIVAIGNDFLASLEVTSHLKELGANKVVSRAARDLQEKFLLRNGADVVVYPE KLVGNLTAVQCSSENVLDYIQVSKDFAVFEIALPKDWMGKSIGEIDVRKKFKVNIIAVKS NDEVNVTLGPDYRFREGESLFIIGKDKDIQQCFHILV >gi|333758476|gb|AFIH01000001.1| GENE 1750 1730343 - 1731401 1101 352 aa, chain + ## HITS:1 COG:STM3090 KEGG:ns NR:ns ## COG: STM3090 COG0192 # Protein_GI_number: 16766391 # Func_class: H Coenzyme transport and metabolism # Function: S-adenosylmethionine synthetase # Organism: Salmonella typhimurium LT2 # 2 352 5 370 384 335 48.0 8e-92 MLFSSEQVSNGHPDKICDQISDAIVTDILSHDKKARIAAEVCIKDYDIIILGEITSTYIP DYQKLVMDVLRKIGLKELENYKVQELISAQSPDIAMGVDHDGAGDQGMMFGYATKESEEM LPLPYVLSTRALQKLRAFNLENDFAVLKPDAKAQVSFDYKEHRIDTFLISSQHSESASLN EVRAIIEKIMQETAEEMNLNTDFHILVNPTGRFVLGSSFADSGLTGRKIIADTYGGAAHH GGGAFSGKDPSKVDRSAAYMARKVARDIVSSGRADRCEVQLAYAIGVAEPVSLYLDCFGT EKEPAGNIWRSVLDSYDLTPKGIISRLDLLNVDYNLVSSYGHFGKPELPWEK >gi|333758476|gb|AFIH01000001.1| GENE 1751 1731542 - 1732183 303 213 aa, chain - ## HITS:1 COG:no KEGG:BPUM_0483 NR:ns ## KEGG: BPUM_0483 # Name: not_defined # Def: histone acetyltransferase HPA2-like protein # Organism: B.pumilus # Pathway: not_defined # 1 201 2 202 207 135 34.0 1e-30 MHYRFAEKKDLQDCVELLTDSFFDYPYFSNFIEENEKRRDFVRSIQSIAVGIYYGKQRMM LAEENGEILAVAAIQSPRDKGVEWKDYVSKKALQTFLIGGIFKTLAWISMTEKAEKVIHS QRKPYWYLGSLAVKNNRRGEGIGGRFLKEGVIPYVAGEGGEQFTLLTNTESNARFYEKAG FSLLSYEELQTPKKRMGNWSYCMDVRTERGIVA >gi|333758476|gb|AFIH01000001.1| GENE 1752 1732480 - 1734603 1786 707 aa, chain + ## HITS:1 COG:CAC0120 KEGG:ns NR:ns ## COG: CAC0120 COG0840 # Protein_GI_number: 15893416 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Clostridium acetobutylicum # 362 705 218 515 555 199 38.0 2e-50 MKKHDAQTTGLRQEKRRKRSHSLSGRISLSLGIIMLFLFAMMTAFILSVASAAFNKKNEQ NMNALSNLNAGRVNKITVNTSTTMQSLADSFVNFQKEDGGDSSLSGKSAVDGVSAPLTIP EAEEEYYLMNTMRGFSKNNLGIVSQALLLEPGVFSKENVNYSLRYDTDGDKFSMVPYEVY GTQDFYKETQNSKAASATLPIENPDTGKSSFYMTIPILDGDRFLGIVTTEISTEVFNELD MSTLGYENVFFDVLDNHNNFVYSNNPDAKGKNLGDLIGQKYSDMLVEKMQNKEAFFQRDS QVRYYVPLEIEGVDWWVQTAMTIPHFDQEKNQLLFALILSEVIIFMLVQMINFVRISKAL KPLRKISDAGKEVANGNFDVEIHYPNQDEIGELSYSISEVIGRSKKIVFDLRDRLEAMAG GNFTENLENEDYIGDYAPLLESLKNIQSDMNKTLQEVHSSSVQVLRSAEQVNTGAQSLSQ GATEQASSIEELSANMQDISHSIQASTKTAGEAFKLQGEAGTAVLQSNEKMEEMRKAMND ITAKSNEISKIIKTIDDIAFQTNILSLNAAIEAARAGAAGKGFAVVADEVGNLAQKSAKA AQNTGLLIEETIEAVEKGARITEETAESLHSVSKSTEEVNTLIEQISSASDKDLKGITSL NQGLQQISSVVQANSATAEQSAAASEELTGQANKMNVLVERFRLKEE >gi|333758476|gb|AFIH01000001.1| GENE 1753 1734744 - 1735460 820 238 aa, chain - ## HITS:1 COG:CAC0711 KEGG:ns NR:ns ## COG: CAC0711 COG0149 # Protein_GI_number: 15893999 # Func_class: G Carbohydrate transport and metabolism # Function: Triosephosphate isomerase # Organism: Clostridium acetobutylicum # 1 236 12 248 248 233 53.0 3e-61 MNMTITEAKALCDTLIPISNTDEVDVVFCVPSIDISTVVEKVKGTAISVGAENLYFEDKG AYTGEISADMLVDAGVKYVIMGHSERRGYFHETDADINKKAKKALEKGLTPIICCGESLE QREMGIYFEWIAMQIKAAFQGISAADAAKCVIAYEPIWAIGTGKTATAEQAEEVCGYIRK VIEEVYNKETAEKIRIQYGGSMNSGNCKELLSKPNIDGGLIGGASLKEEFAKIVHYNA >gi|333758476|gb|AFIH01000001.1| GENE 1754 1735581 - 1736798 1408 405 aa, chain - ## HITS:1 COG:CAC0710 KEGG:ns NR:ns ## COG: CAC0710 COG0126 # Protein_GI_number: 15893998 # Func_class: G Carbohydrate transport and metabolism # Function: 3-phosphoglycerate kinase # Organism: Clostridium acetobutylicum # 3 405 2 397 397 532 71.0 1e-151 MAELNKKSVDDISVKGKRVLCRCDFNVPLKDGKITDENRLVAALPTIKKLISDGGKVILC SHLGKPKGEPKPELSLAPVAKRLSELLGQPVLFAKDDNVVGENAKKAVSEMKDGDVILLE NTRYRAEETKNGEAFSKELASLADVFVNDAFGTAHRAHCSNVGVTEFIDGPAVVGYLMEK EIRFLGQAVENPVRPFVAILGGAKVSDKLAVIDNLLEKCDTLIIGGGMAFTFVKAQGYEI GKSLVDDEKLQYCKDMLAKAKEKGCEILLPVDAVCAASFPDPIDDKNLPVKTVDIDAIPS DMLGLDIGPKTQELFANAVKTAKTVVWNGPMGVFENPILAQGTIAVAKALAETDATTIIG GGDSAAAVNTLGFGDKMTHISTGGGASLEFLEGKELPGVAAANNK >gi|333758476|gb|AFIH01000001.1| GENE 1755 1736971 - 1737996 1070 341 aa, chain - ## HITS:1 COG:lin2553 KEGG:ns NR:ns ## COG: lin2553 COG0057 # Protein_GI_number: 16801615 # Func_class: G Carbohydrate transport and metabolism # Function: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase # Organism: Listeria innocua # 1 341 1 336 336 428 64.0 1e-120 MAVKVAINGFGRIGRLAFRQMFDHEGTEIVAINDLTDPKMLAHLLKYDSSQGRYKYCDSV VAGEDYIEVKGKKIKIYKEADASKLPWGQLSVDVVLECTGFYTSKEKSEAHIKAGAKKVV ISAPAGNDLPTIVYNVNHEILKAEDNIISAASCTTNCLAPMAKALNDFAPIQSGIMATIH AYTGDQMILDGPHRKGDLRRARAGAVNIVPNSTGAAKAIGLVIPELNGKLIGSAQRVPVP TGSTTLLFAVVKSSKEVTKESINAAMKAASDPETYGYTEDEVVSSDIVGMTYGSLFDATQ TMVSKVGDDLYEVQVVSWYDNENSYTSQMVRTIKYFEKFVK >gi|333758476|gb|AFIH01000001.1| GENE 1756 1738243 - 1739928 1436 561 aa, chain - ## HITS:1 COG:BH1407 KEGG:ns NR:ns ## COG: BH1407 COG1283 # Protein_GI_number: 15613970 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/phosphate symporter # Organism: Bacillus halodurans # 7 554 9 535 543 300 34.0 5e-81 MSYLSSLFSLFGGLGMFLYGMTVMSDGMQKAASSKMSKFLNIVTENRVMAVILGAGITAL VQSSSATTVMVVGFVNAGILNLSQSVGIIMGANIGTTITAWMVSLTQVSGSALSIFKPEF FAPLLVGFGSFRLLFGKKGNDDLLADFCVGVGLIFIGLEFMSSAVSPYANSPIFSKAFQI MGGNPILGILTGAVVTGLIQSSAASVSILQTLALSGAVPRAAGFYITLGQNIGTCVTAMI SSAGASRTAKRAAMIHLLFNVTGAVLFGIIIFLMSLPFASFFQGRLSPVEISMFHTIFNI SCTIVLYPFADLLVALSGKLVLETKKDKEEAENPNHYTEVEKSLIQHLDLRILESPAIAI AAAKSEVVNMARITEENIHHATDILLEEKTEEIPEIFKQEKVIDNMQKLLTEYLIHIGNL SLNEMQKLEVNNMFNTITDIERAGDHAENIAEQAKFAEEHAISFSEIGQDDIRKISKTVV ESFHASIEAFEKNDLDMVVKTAHLEDQVDEMEEDMRETHIERLNSGACAPQAGVVFLDVI SDLERISDHADNIAGYVKAMI >gi|333758476|gb|AFIH01000001.1| GENE 1757 1740215 - 1740385 57 56 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSAAFHPFEIPKRLAILLLEKTNESKILQDFGTIFSKQKSISFFRSFVFRHSSEKI >gi|333758476|gb|AFIH01000001.1| GENE 1758 1740445 - 1741263 921 272 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_0966 NR:ns ## KEGG: EUBREC_0966 # Name: not_defined # Def: N-acetylmuramoyl-L-alanine amidase domain protein # Organism: E.rectale # Pathway: not_defined # 26 268 104 347 347 266 59.0 5e-70 MKGRAIVVGLMLSAMLSMQSFAATEIGLNLNWKYAKNAKINTGKAILYTSDSKNPKKITI AVNAGHGTKGGEKVRTLCHPDGTRKVTGGTNAAGSTTALAVSSGMTFKDGTKEATVTGQM GHIFAKKLLNAGYDVLLIRDGDDVQLDNVARTVLANNKADAHIALHWDSTEKDKGAFFMS VPDSLKKMEPVASHWESHEKLGESLIAGLKGKGVKIFSSGSMDMDLTQTSYSTVPSVDIE LGDKISDHSEKQLNLLGDALVDGVNKYYGFTS >gi|333758476|gb|AFIH01000001.1| GENE 1759 1741372 - 1742214 674 280 aa, chain - ## HITS:1 COG:CAC0501 KEGG:ns NR:ns ## COG: CAC0501 COG1968 # Protein_GI_number: 15893792 # Func_class: V Defense mechanisms # Function: Uncharacterized bacitracin resistance protein # Organism: Clostridium acetobutylicum # 1 275 1 273 274 216 46.0 3e-56 MNIVEFLKVIVFSLVEGFTEWLPISSTGHLILLQNIIPLAGTKEFFSTFEVLIQLGAVMA VVQEFFFRLWPFGKRKKSGGIYLKEEKVILIGKVLLACLPAAVFGLLLDDFLDQYLYNGF VVSLMLILYGVFFITLEQRNASRKFAFNRVEDLPWTLCLEIGLFQCLALIPGTSRSGATI IGAMLLSVGRVAATEFSFFLSVPVMAGASLLKLIKHGGHFSGMEWFTLLLSMVLAYLVSL YCIRFLLRYIRSHDFKIFGYYRIIFGGIMLMWFLVSRFLL >gi|333758476|gb|AFIH01000001.1| GENE 1760 1742304 - 1742972 547 222 aa, chain - ## HITS:1 COG:BH3850 KEGG:ns NR:ns ## COG: BH3850 COG0692 # Protein_GI_number: 15616412 # Func_class: L Replication, recombination and repair # Function: Uracil DNA glycosylase # Organism: Bacillus halodurans # 1 221 3 223 224 263 57.0 1e-70 MIENDWAEKLQGEYKKPYYRKLYNTVVKEYKEQQVFPKSGDIFKAYDLCPFHKLKVVILG QDPYHNVGQAQGLSFSVQKGIALPPSLQNIFKELQDDLSYPIPKSGDLSHWAEQGVLLLN TVLTVRAHQAFSHRGIGWEEFTDATIRAIEEKEEPVVYILWGSPAQKKRAMIHQKKRLIL TAPHPSPLSAYRGFFGSRPFSKCNAYLEQEGLSPIDWRLSDE >gi|333758476|gb|AFIH01000001.1| GENE 1761 1742981 - 1743655 462 224 aa, chain - ## HITS:1 COG:no KEGG:EUBELI_01251 NR:ns ## KEGG: EUBELI_01251 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 1 203 12 209 211 223 53.0 3e-57 MKILCIADEENRGLWDHFQKEKLEGIDLILSAGDLSSDYLQFLVTMGRAPLLYVHGNHDE SYSFKPPLGCESVEDRVYDFKGLRILGLGGAPWYKPGSFMYSEDDMKRRINKVKKDILLK NGFDILLTHSPVRGYGDMEDPAHRGFCAFEELLQKYKPKYMIHGHVHGNYGSAFKRELQH SSGTRIINAYDKFVLDIEEHEYPREGKTGSLLYDLYKQMKGKKE >gi|333758476|gb|AFIH01000001.1| GENE 1762 1743652 - 1745568 1496 638 aa, chain - ## HITS:1 COG:AF0890 KEGG:ns NR:ns ## COG: AF0890 COG1744 # Protein_GI_number: 11498495 # Func_class: R General function prediction only # Function: Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein # Organism: Archaeoglobus fulgidus # 290 618 60 393 397 137 25.0 7e-32 MLDDYMEAKKLGDRAYRNALLFGQAPYLEALDERLGKEDIQGENVLGLLEIPLQDIAGTK TKARQQSFARNFMPILSPKTEFASKWANLFDSITEEGVREPILVYEYMYRFYVQEGNKRV SVSRYNKAVSIPAKVIRILPKRTEEKENKLYYEFVDFYKSSGLYGIYFSEPGAYERFSQF LGMKNGEIWSSELCKDVRAAFSRFSDLYFAMGGRRLENTVGDAFFLYISVYGIQSILENA TDKIRENLEKLWNEFKKSAGEVVLIQNPEEMKKESNFFTVFSGGSLSGVKKELKIAFLYE RSVESSTWAYAHELGRNYIQDRFKEQVESRAMENCSTDEEVRAAIEEAVAWGARLIFTTA PFMAQESIKLALKYPDVSILNCSVNTSYNSIRTYYGRMYEAKFLMGALAASVSDGNDLGY VEQFPLYGTLANINAFAIGAQFINPWSRVHLSWSGLQNADWKAVFQSKGIHVISGPEFAK PSERSREFGLYLNLDGEVQSNIAVSIYNWGRYYELILHSFLEGSYHSNNLAKSYSALNYY YGLKEGVIDVILSRNLSYSSKKLVSILEKEIKEGSLLPFSGEIHSQREKIHSEGTESLEM EEIVDMRWLNDNVLGEIPPLEAFTKESQEAILSGGFLL >gi|333758476|gb|AFIH01000001.1| GENE 1763 1745664 - 1746770 1148 368 aa, chain - ## HITS:1 COG:SP0117 KEGG:ns NR:ns ## COG: SP0117 COG5263 # Protein_GI_number: 15900059 # Func_class: R General function prediction only # Function: FOG: Glucan-binding domain (YG repeat) # Organism: Streptococcus pneumoniae TIGR4 # 70 282 526 731 744 166 42.0 7e-41 MNLGKRFGLKALALGLCIASLSMTALAAGWGQEKGKYYFIDPKNNEKVSGKWIHTSSGYY YIGADTYMVTGWKKINNSWHYFRPSGLMVTGWREVDKLWYYLKSDGTMQTGWLKLQKDGK DVWYYLKASGAMATGWRKISDKWYYFNPEDGSLVMQKWLKISDKWYYFGSDGAMQSGWLN LNGEYYYLSSTNGNMETGWKTDTDGNKYYMDLGNGKMSTGWKQIENAWYYFLNNGKMVKG WLKEKSHYYYLEDGKMLVNTTVTLDGRSFSFNEYGVCTSDTSNLNFTEANTQNNNNNNNN SNNSQGPGAAGPGVTGPGGNSSTESNTSPNPNANQSSSDGPSAQGPSGTSPNASSGGTIQ PGSTTGPQ >gi|333758476|gb|AFIH01000001.1| GENE 1764 1747088 - 1748446 1537 452 aa, chain - ## HITS:1 COG:SPy1150 KEGG:ns NR:ns ## COG: SPy1150 COG0446 # Protein_GI_number: 15675127 # Func_class: R General function prediction only # Function: Uncharacterized NAD(FAD)-dependent dehydrogenases # Organism: Streptococcus pyogenes M1 GAS # 1 441 1 452 456 491 55.0 1e-138 MAKTILVGANHAGTACANTILSYPNQELTIYDQNSNISFLGCGMALWIGEQIHSGDGLFY AKPENFLAKGAKVNMESQVLSVDYDKKTVKVQLKDGQVIEDHYDNLVFATGSIPNRIPVK GFDLENVQMVKLYQNAQEVIEKLKNKGEFKKVCVLGGGYIGVELAEAFQRLGLEVTLIDM VDRILAGYFDAPFSDELKNRMEEHGIKLALGEKVEEFLGEGKVSGVKTDKGVYDADMVIC AVGFKPNASLGADHLKLYANGAYLVNRKQQTSDPSVYAIGDCASLYDNARGRENYIALAT NAVRSGVVAGHNICGTPVESLGVQGSSALGIYGYKLSCTGLSLAAAEREGMSVSYEDYED TQFPAFMEVENPKVKIRIVYKKDDKKIVGCQLGSSYDATAIIHFFSLAIQKGLTMAELPL VDLFFMPHFNQPYNYVTMAGLQWLNKELGLKG >gi|333758476|gb|AFIH01000001.1| GENE 1765 1748674 - 1750590 1550 638 aa, chain - ## HITS:1 COG:TP0107_1 KEGG:ns NR:ns ## COG: TP0107_1 COG4750 # Protein_GI_number: 15639101 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: CTP:phosphocholine cytidylyltransferase involved in choline phosphorylation for cell surface LPS epitopes # Organism: Treponema pallidum # 101 354 1 251 251 272 54.0 1e-72 MNSCAILLRNIMENPDFSQRQLAERTGMSLGKVNRCLKDWEEQGYLKKTNESKVEGRSVM HNATEKQSHAEKRIKKGQSRILTEKGKAFLEANKVDAALILAAGFGSRFVPLTYECPKGL LEVFGERMVERQIKQLHEVGIYDITIVVGYLKEKFDYLIDAYGVKLLYNPEYSVKNTLGT LYHARKAMEGKNFYILSSDNWMRENMYHSVEPLSWYAASFMEGETKEWVLHCAKDGQIKS VEVGGENAYCMYGPVFLKKEFFSAFLPYLVEYYHKPGTEDFYWEDVLRLTLKHLPPIYRN EQKDGQIYEFENLEELRAFDEKYNHSSGSEAMELISAVFHIPECEIVKLRCLKAGMTNQS FLFRIHKESRNKDYAGKDFICRIPGVGTGKLINRKEEEEIYRIVKDLHITEELLYFNPEN GYKISRYYEEARNADFSKQEERRACMKQLLKLHEGKKTVGHPFSLREGLAYYEAICLEGG GEIPYQDYEKIKPDREKMLSFTEKSNPPLCLCHIDAVQDNFIFTKEGVKMIDWEYAGMAD PLLDIAMGAIYSYMDFQEAKGLLEDYLLAAEGEKVAEPLLLHGRTKEQLEKLLIAYMGLS GLLWSLWCAYKMRKGQEFGEYSLKMLRYFKEAKKTLGL >gi|333758476|gb|AFIH01000001.1| GENE 1766 1750787 - 1752889 1694 700 aa, chain - ## HITS:1 COG:CAC2658 KEGG:ns NR:ns ## COG: CAC2658 COG3968 # Protein_GI_number: 15895916 # Func_class: R General function prediction only # Function: Uncharacterized protein related to glutamine synthetase # Organism: Clostridium acetobutylicum # 4 697 8 696 696 800 54.0 0 MDNFSKNVFHDGMMRERLPKNVYVKLKKAIQEGNSLSLELADAVAQGMKEWAIEQGATHY THWFQPLTGITAEKHEAFLSPVGEGKVMLEFSGKELVRSEADASSFPSGGLRATFEARGY TVWDCTSPAFLRREGETVTLCIPTAFCSYTGEALDKKTPLLRSMEAINREALRILRLFGN TGSRYVKPSVGAEQEYFLIDREKYLKRKDLVYTGRTLFGSMPAKGQELDDHYYGIIRKRV AEFMRDLDEELWSLGVPVKTEHNEVAPSQHELAVVYEEANISLDHNQLVMESLKKVASRH GLECLLHEKPFSGVNGSGKHNNWSLTTDDGINLMNPGESPHENIQFLLVLACVLAAVDTH SELLRMSAANVGNDHRLGADEAPPAIISCFIGSQLQGVVEQLIGTGYATASQKGRSLTMG VRALPNVLADDTDRNRTSPFAFTGNKFEFRMLGSSDSIASANIILNTITAEQFQKAADFL EKQENFQLAVHDYIKELLTKHERIIFNGNGYAKEWIEEAERRGLPNLSSTVQAFSALSKK EAIALFSKFSIYTESELLSRERVEYEHYTKVIHIEARAMVNISGKQIIPAAVQYVEKLAS ALKLVREVSKTASTYAEERLLNETSSLLEEIDRRREELLSKLENSGEGASEKEKAFYAYE TIVPAMQALRKPCDILETIMDKSLWPFPSYGDLLYEVSEI >gi|333758476|gb|AFIH01000001.1| GENE 1767 1753050 - 1753916 1121 288 aa, chain - ## HITS:1 COG:CAC0827 KEGG:ns NR:ns ## COG: CAC0827 COG0191 # Protein_GI_number: 15894114 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Clostridium acetobutylicum # 1 288 1 287 287 394 70.0 1e-110 MLVNAKEMLDKALEGHYAVPHFNINNLEWTKAVLLACEEVKSPVILGVSEGAGKYMCGFE TVTAMVKAMDKSLGITVPVALHLDHGSYDGCLACIKAGFTSIMFDGSHFGIEENVEKTKE LVATAHKAGMSIEAEVGAIGGEEDGVVGMGECADPQECKKIADLGVDFLAAGIGNIHGIY PENWQGLSFETLAAIKAAIGENLPLVLHGGSGIPDDQIKKAISLGVSKINVNTELQLVFA KATREYIEAGSDKKGKGYDPRKLLKPGFDAIIEECKAKIALFGCANKA >gi|333758476|gb|AFIH01000001.1| GENE 1768 1753999 - 1755477 1403 492 aa, chain - ## HITS:1 COG:CAC0999 KEGG:ns NR:ns ## COG: CAC0999 COG0498 # Protein_GI_number: 15894286 # Func_class: E Amino acid transport and metabolism # Function: Threonine synthase # Organism: Clostridium acetobutylicum # 3 490 6 494 496 534 55.0 1e-151 MNYQSTRGGERGVSPSLAIVKGLAKDGGLFVPSEIPSLPLSVRELSELSYQDLAYEIMKL YFTDFTEEELRYCINSAYDTKFDTEEIAPVVKKGEYYYLELFHGRTLAFKDMALSILPYL LKVSTQKNDIREKIVILTATSGDTGKAALEGFSDVENTEIIVFYPKDGVSSFQEQQMKVQ RGKNTHVAAILGNFDDAQSGVKQIFADEEYRAELLKQGYRLSSANSINIGRLVPQIVYYV YAYGQLLKRGELSSGEELAVSVPTGNFGNILAAYFAKKMGLPLGTLICASNENRVLTDFF HTGVYDKNRPFHVTSSPSMDILISSNLERLLYTVHADEKDVASYMEDLRERGRYQVSENI EQKLDGEFYSGSARDGEASVTIFQCFKDCAYILDPHTAVAKFVADNYSYKRGKQGKTLIV STASPYKFSQTVLKALKEPVPEDVFSAIRAVSELSGEKIPDAVLEVMEGEVRHNTVCMVK DMKLTISHFLLS >gi|333758476|gb|AFIH01000001.1| GENE 1769 1755580 - 1756293 620 237 aa, chain - ## HITS:1 COG:no KEGG:Closa_0457 NR:ns ## KEGG: Closa_0457 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 185 1 185 302 97 36.0 3e-19 MNENPIWTKDNMLSDRSLFMPMLISFTNLVLLILFIANLYYISLNGLQTGEIRYAGFLQI YYFVAAGLFLFLLLLAPAITVSSLSTEEEEHMLELLLETDLDSRSIIFGKLFSELSTLGT LLLSTLPFLATVFIYGGVSNYYLCLYFLGYGISCVFLSSLGIACSGLAKNSVYATIFAYG ISFLLYGLLFYGLFSLQKNSYFIYATILSFILLGLLSLLCLTIGRKTLDKRYNGRNL >gi|333758476|gb|AFIH01000001.1| GENE 1770 1756286 - 1757227 897 313 aa, chain - ## HITS:1 COG:alr0970 KEGG:ns NR:ns ## COG: alr0970 COG1131 # Protein_GI_number: 17228465 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Nostoc sp. PCC 7120 # 2 301 7 309 316 152 29.0 9e-37 MIQFTNVKKSFGNYLVLEDFSLEVETGQVFGLLGLSDSGKTTVCKLLTGLLALDSGEILV DDMKAGTGVRRLKRRLGYVPQVMGSYPKMTVFEFLHFFASCYHLEESKIRGRIHMLLELA GIRSWENSPMEVLPRAVMQKLSIVRAMLHEPKILVLDDPMMSLDLRTVAEIKEILLDYAE DGRTVFLTGSALGDFSDLCTHLSFLHQGRVIRKGAVSRIFQEISAQNPIVIQVEGKRTAL LSLLKEDYRVKSISLKENEIHIQFKGDAREEAELLKKIVDTGILLHSFYREAGNMENILG KEDKGERSLFSYE >gi|333758476|gb|AFIH01000001.1| GENE 1771 1757224 - 1759596 1805 790 aa, chain - ## HITS:1 COG:no KEGG:Closa_0455 NR:ns ## KEGG: Closa_0455 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 25 787 50 828 829 326 26.0 3e-87 MLLKNRSFLFIFFCLFFLFSIKGYSENLNLSLQYGIQNTAKAGRSLPLQITVENAEGSTF SGNLKIILAESGKHIVEFSFPLVVEGKSVKEIEKSFMLPTGVNQLLLTVENLSSEQIAYR RVGLDISGSDAELLIGSLSQNGDTISFLQNARVNEGLLKTRVISFTGDSFPKEETDLYLL DLLLIRDFDLFNLDKQQRDSLKHYVEHGGVLLFSLSENGMQTLSEDFSSYLETPLDFQER TLFLAKENEGGEEEGESLLASPVYLKGGREGAFSEGKAYLSVYPMGNGLLAVLGYDVLKL ERYATEDSDYVGKLFLEIYGQNRLNTLSISASERSLKQYWDLEELMNLSDLSKLPSIPLY FCILLLYLIVVGPGLYFFLRSQNSLRVYRPSIALISLFMVLFIWVLGMGTRINDSFISYV KLLQLTKDSVDEENYINFRSPKERNFSMEIQPEYTVNPILKGVDYTGDLSGLVKDSGVTR TEVLQERDKSAIVIHKGSAFSPHYFLLNKKIPNDIGQIEGKVSYFSGELSGEIINNTNYV LSDAFILLYGRVIKLGKLEKGQSIDVSIAESMPMPVGDFDYLSNALFTGNSKNFIRFILS EQIHSYFPDARFYALAREDGVSFTENGEGDKKIDRKNFEKYGFSIVNASLELSREKDGII EYSALSRDPSVDSGEFDMATNTMNPMIPLEIRYNLGEEEEISGISFEIMDISGNSLLANF QGDMAIYNNSTGGYDSIGRKEGVLSGDRLKKYLTEKNELKLRFVAKESTASPEIRQLLPM ITVSAREGSE >gi|333758476|gb|AFIH01000001.1| GENE 1772 1759577 - 1760866 1178 429 aa, chain - ## HITS:1 COG:BH1809 KEGG:ns NR:ns ## COG: BH1809 COG0642 # Protein_GI_number: 15614372 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Bacillus halodurans # 23 369 3 346 351 209 38.0 7e-54 MNQERAPHHFGRGYMMQVLLHVGMSAIFAGVVECFLVFNISSYTSYLYQMGNDHPMVQSF AFASVVSILLFVLLGIVLFTLCFLFLQRKTARDIETLAQAVKQISAGDFNTDISISGEGE IAHIAESIRMMEEELSRHIEMEKSNEQSKTDLITNIAHDLRTPLTSILGYLDLIKNNQSA NDEMKAHYLEIVYNKALRLQKLIEELFGFTKLSYGKMNMKLITLDLVQLLSQLLEENYPN FEKNDLSCDFSSNVKSLYIDGDGDLLFRLFDNLISNAIKYGAEGKMIKLRLRKEKQFVRV TVLNFGYIIPEKELPLLFDKFYRVESSRSLSTGGTGLGLAIVKNIAEMHHGYVEAKSDLS GTRFIVTLPLEYRDEKAPFEGGKNPEDKEKKKASEGQGGMEKGYSKVLQDKRKRKKKRGG REEDAFEKS >gi|333758476|gb|AFIH01000001.1| GENE 1773 1760878 - 1761579 990 233 aa, chain - ## HITS:1 COG:CAC0564 KEGG:ns NR:ns ## COG: CAC0564 COG0745 # Protein_GI_number: 15893854 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 1 233 1 231 233 246 56.0 2e-65 MPQINILVVDDEKEIAELVEIYLVSDGYKVFKAYNAEEGLKILSEEEIHLVLLDVMMPGM SGLEMCRKIRESSNIPVIMLSAKSEDLDKIVGLTGGADDYVTKPFNPLELTARVKSQLRR YTQLNPNAGTNYINNEINIRNMHINKDNHKVIIDEEEIKLTPIEFDILFLLASHPGKVFS TDEIFEKVWNEKVYEANNTVMVHIRRLRGKMKEDQREDKIITTVWGVGYKIEK >gi|333758476|gb|AFIH01000001.1| GENE 1774 1761667 - 1762815 796 382 aa, chain - ## HITS:1 COG:ECs3462_2 KEGG:ns NR:ns ## COG: ECs3462_2 COG0077 # Protein_GI_number: 15832716 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydratase # Organism: Escherichia coli O157:H7 # 115 374 6 271 282 155 31.0 1e-37 MGLEEIRKELDTIDREIVQLFQKRMDLSIEVAKDKAKTGKAVFDGKREEEKLNSISDMVG DPLLKTPARELFRGLMTLSRRRQLQYLSEIGRKSDFSFREVGELSFSGKKLVAQGVKWSY SYLAGRVFFQEDSIEFVEHFQDVLEAVQSGRADYGILPMDNSTYGMVQDNYDLLSRFEEI SVLKEINYPVSHCLCSAGDYRTEEIRKVYSHPQALAQCREFFKEYPFMEKIADLNTAIAA KKLAETKEEYAAVLCSRPAAEYYGLRILQDGVSSKENTTRFFLIGKEKIYTKDADKLTMI LWAANQAGSLYHVLGDFTWNGLSLSMIQSRPVGDKAFSYLFFVDVSGNLSEPEMENALSA LKEEGVQFRILGNYLPCKVKNS >gi|333758476|gb|AFIH01000001.1| GENE 1775 1762834 - 1763610 727 258 aa, chain - ## HITS:1 COG:CAC0965 KEGG:ns NR:ns ## COG: CAC0965 COG0204 # Protein_GI_number: 15894252 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Clostridium acetobutylicum # 20 242 22 240 241 129 30.0 8e-30 MIALIRVGLLLFGFLGLGSLRLLFIRKRERTRERDLECLSIVQGKLKAILKICKVEVQAE GLENIPKDEAVLFVGNHRSYFDIVVGYSLLNNVTGFISKDDLTRIPNLKLWMEELHCLFL DRDNLKQNLKVIIEAIQEIKRGISFWIYPEGTRTKGESEEDMLPFKKGSFKLAEKTGCKI IPVAMINTRKIFEEQFPILKSTKVYVRFGEPILLSALSEEEKTHIDNYAEGKVLSMIRDL KEIERKELEAKESESKAQ >gi|333758476|gb|AFIH01000001.1| GENE 1776 1763620 - 1764387 669 255 aa, chain - ## HITS:1 COG:lin1062 KEGG:ns NR:ns ## COG: lin1062 COG1682 # Protein_GI_number: 16800131 # Func_class: G Carbohydrate transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: ABC-type polysaccharide/polyol phosphate export systems, permease component # Organism: Listeria innocua # 1 255 17 267 267 125 32.0 1e-28 MILDLARADFKKRFVGSYFGVVWMLIQPLVTIAIYAFIFGPYGFKSSPPVPNVSYTLWLI PGIVPWFFFSEVMNMNTGILQEYHYLVKKVVFPIELLPVIKLLSCTLVHCFFLLVMFLFY LFSGKMPQLTWLQVLYYSFAAAMFGLGLSYFTSAISVFFKDMQQIVAIVLQFGIWMVPIM YDELLFTNKAPWLKIFFKINPFYYIVAGYRDSMITGNYFFERPGLTLYFWLVTLFLLFVG LRFFRKLRPHFSDVL >gi|333758476|gb|AFIH01000001.1| GENE 1777 1764612 - 1765649 747 345 aa, chain - ## HITS:1 COG:STM2085 KEGG:ns NR:ns ## COG: STM2085 COG0463 # Protein_GI_number: 16765415 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Salmonella typhimurium LT2 # 40 324 5 288 314 166 37.0 5e-41 MTDCFRQDSPEEAVLREENRREKENERRQGGRETLPSFDVLIPTYKPGEKFRALLSALEE QEFPPAKIIIVNTEERYFPKELLEGRKVEVSLHHIKREDFDHAYARNLAASFSDAEYFLS MTDDAVPADKKLTKELLTAFSWDNRIAEVYARQLCTKDSSFDEVLSRSFNYGDKVEIKGI EDVKRLGIKCFFASNVCCMYKKAVFRELQGFLSPTIFNEDMIFAARAEKAGYKVAYNPLA RVYHSHHYSAGQQFRRNFDLGVSHRDFPEIFSLVPPEKEGMKMFRQNAKTLVSEGKALLL VPLFFRTGARFLGYKAGKKYPVLPQIFRNAVTLNPQYFDKKGEKS >gi|333758476|gb|AFIH01000001.1| GENE 1778 1765854 - 1767119 823 421 aa, chain - ## HITS:1 COG:SPy0797 KEGG:ns NR:ns ## COG: SPy0797 COG2244 # Protein_GI_number: 15674839 # Func_class: R General function prediction only # Function: Membrane protein involved in the export of O-antigen and teichoic acid # Organism: Streptococcus pyogenes M1 GAS # 14 421 13 420 428 112 26.0 1e-24 MEKKRISFMENDVLWNALGSMMYALASMILAFFVLRLLGEKEGGIFGFGYSTLGQQFFIL AYFGIRPFHITDMRGEFSFREYLGFRNLSTALSVFFALLFLLYQFLKGNYTAEKSAILFF LCLYKILDGYVDVYESELQRRGKLYKTGQSLFFRTLFAVVLLLITLLLTKNLFLGVILMN LCQLFCFYFFCLSPLKKTVAIGEERRFSFEAGKRLIMESFFLFISVFLDFYVFSSSKYAV DAVMGSSFSGIYNLLFMPSNFIYLLANFIIRPALPRLAALWQEGKTVDFRKEEGSLMKKV LLLSFVLLILAVLLSPLALWILERLLGETFYGKMTAERFSFCLLILGGCFYALANLEYYL LVTKRRQKKIFAGYLIASVLSFLTADSMLKRGGFFFGSLQFAGMMLFLFLFFFLSEKTGK G >gi|333758476|gb|AFIH01000001.1| GENE 1779 1767243 - 1767332 68 29 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGKSGEALTGVIRNVDWHFSPICDKVFYV >gi|333758476|gb|AFIH01000001.1| GENE 1780 1767386 - 1768399 757 337 aa, chain + ## HITS:1 COG:MTH172 KEGG:ns NR:ns ## COG: MTH172 COG1216 # Protein_GI_number: 15678200 # Func_class: R General function prediction only # Function: Predicted glycosyltransferases # Organism: Methanothermobacter thermautotrophicus # 2 318 3 324 332 183 36.0 4e-46 MKTVVIIPNYNGKHFLEKCMQALDKQSTKDFSVFFVDNASSDGSIPAIKEYIEKESERIF LLENKENYGFAKAVNQGILYAKEHGADYALLLNNDTEVDPRFVENLVRFMEEKEAKGERI FALSSKMVKMHDEKLMDDAGDELCLLGFPFQRGLEDRVENWNKTEKVFSACAGAALYSIS ALSKTGLFDEKHFAYLEDVDISFRAQLYGYSIYYCPSAICKHVGSGTSGGKYSDFKVELS ARNSIFLLYKNFPFLLKIVNFLPFLLGFLIKALYFQKKGYGKAYRRGIMRGLKERKGMKK ADFRGIPLSRYIALEWRLLKNCFVYLSERNRRKQVRV >gi|333758476|gb|AFIH01000001.1| GENE 1781 1768556 - 1770223 1707 555 aa, chain - ## HITS:1 COG:AGc4114 KEGG:ns NR:ns ## COG: AGc4114 COG0119 # Protein_GI_number: 15889539 # Func_class: E Amino acid transport and metabolism # Function: Isopropylmalate/homocitrate/citramalate synthases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 2 553 28 577 583 598 52.0 1e-170 MDQVKRYRKFPIFRYPERTWMDQEITKAPIWCSVDLRDGNQALVDPMTVEEKVEFFQLLC KLGFKEIEVGFPAASQIEFDYLRTLVEKNLIPEDVTVQVLVQCREELLERSFQALQGVKK AIVHIYNSTSVLQRDVVFGKSREEITAIALTAVEMVKRHEKDFSGELRLEYSPESFTGTE MDYALEICNAVISAWGTKAGREIIINLPNTVEMHSPNVYADQIEFMSKNMKEREHVILSV HPHNDRGEGIASAELALLAGAQRVEGTLFGNGERTGNVDILTLAYNLFSHGIDPKLNLEN VREIQEVYERCTKMHIPERHPYAGKLVFTAFSGSHQDAINKGLQAMKERKSLIWEVPYLP IDPADIGREYEPVVRINSQSGKGGVAFILDFQYGYKLPKGMQREFADYIQSISEKEGEVS PERILEVFLAEYVEAKSPLLFKNLRSMDMENEKEHYVSFVQLSFENRGILKEISASGSGP IDAVANALQKELKKEFEVIDYSEHALSSASSAKAVSYIHLQDKASGKMTYGVGISSNITR SSVRALFSAINRLYY >gi|333758476|gb|AFIH01000001.1| GENE 1782 1770346 - 1771698 1640 450 aa, chain - ## HITS:1 COG:BS_ybbT KEGG:ns NR:ns ## COG: BS_ybbT COG1109 # Protein_GI_number: 16077245 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Bacillus subtilis # 1 445 1 444 448 426 48.0 1e-119 MGKYFGTDGYRGEANVDLTADDAFKVGKFLAYYFSNKGTKECRIVIGKDTRRSSYMFEYA LSAGITAAGADAYLMHVTTTPSVSYIVRSEDFSCGVMISASHNPFYDNGLKVINENGEKV SDDFIAEIEAYLDGETEEVPLATGDKIGRTVDFAAGRNRYIGYLISLATRSFKGKKIALD CANGSASSCAKAVFDALGADTHVLSNDPNGYNINANCGSTHMEALQEYVKNGDCEIGFAY DGDADRCLCVDSDGELVDGDQILYLCGKNMRDKGQLKDNKIVTTIMSNFGLYKALDGAGL SYEKTKVGDRYVYENMAENGYSLGGEQSGHIIFMRHATTGDGILTSIKLMEVLLEEKKSL KEALAEYQRFPQVLKNVRVKDKLLVEQNETVQAAVKKVEESLGEDGRILLRASGTEPLIR VMVEASKEELCEKYVEEVIAVMKKEGLVLS >gi|333758476|gb|AFIH01000001.1| GENE 1783 1771977 - 1772903 907 308 aa, chain - ## HITS:1 COG:CAC2315 KEGG:ns NR:ns ## COG: CAC2315 COG1091 # Protein_GI_number: 15895582 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-4-dehydrorhamnose reductase # Organism: Clostridium acetobutylicum # 1 304 1 280 280 201 38.0 2e-51 MKIFVTGVNGQLGHDVMNTLYRRGISAIGSDIKENYCGVEDGSPACTMPYIGLDLCDEEK TRKVISELEIDAMIHCAAWTAVDAAEDLENRAIVEKINGEVPGFLAKIMKERDGKMLYLS TDYVFSGEGTEPWKPDEKDFNPINVYGKTKLMGEERIREVLEKYFIIRIAWVFGLNGKNF IKTMLNVGKSHEEVRVVNDQIGNPTYTLDLAELLVDMICTEKYGNYHATNEGEYISWYDF TKEIYRQAGLSTKVLPVSTEEYGLSKARRPKNSRLDKTKLKEQGFTPLPDWKDALSRYLK ALAMEEGC >gi|333758476|gb|AFIH01000001.1| GENE 1784 1772905 - 1773927 1051 340 aa, chain - ## HITS:1 COG:MTH1789 KEGG:ns NR:ns ## COG: MTH1789 COG1088 # Protein_GI_number: 15679777 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-D-glucose 4,6-dehydratase # Organism: Methanothermobacter thermautotrophicus # 2 337 3 331 336 412 57.0 1e-115 MKTIVTGGAGFIGGNFMHFVVNAYPEEEWICLDKLTYAGNLETLKPLEGKKNYKFVKGDI ADREFIFDLFRTEKPDRVINFAAESHVDRSLKDPELFLRTNVLGTVCLMDACREFGIERY HQVSTDEVYGDLPLDRTDLFFNENYPIKTSSPYSSSKGSADLFVLAYHRTFGLPVTISRC SNNYGPYHFPEKLIPLVISRALNDERIPVYGKGENVRDWLYVTDHCKAIDLIVRKGKVGE VYNVGGHNERTNLEVVKTILKALNKPESLITYVTDRPGHDMRYAIDPTKLETELGWKPEY TFDTGIPVTIDWYLKNKDWWEHIISGEYQEYYKKQYGEEG >gi|333758476|gb|AFIH01000001.1| GENE 1785 1773975 - 1774853 1036 292 aa, chain - ## HITS:1 COG:NMB0062 KEGG:ns NR:ns ## COG: NMB0062 COG1209 # Protein_GI_number: 15675999 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-glucose pyrophosphorylase # Organism: Neisseria meningitidis MC58 # 1 286 1 286 288 405 67.0 1e-113 MKGIILAGGSGTRLYPLTRVTSKQLLPIYDKPMIYYPLSVLMDAGIRDVLIISTPVDTPR FKELLGDGSSLGMNLDYAVQESPDGLAQAFIIGEEFIGNDKVAMILGDNIFSGYGFKEIL KKAVAKESGATVFGYYVDDPERFGIVEFDGSGKAISIEEKPEKPKSNYCVTGLYFYDNRV VEYAKNLKPSKRGELEITDLNRIYLENGELDVALLGKGFTWLDTGTQESLVDATNFVYTV ETHEHRKIACLEEIAYKNGWISREKVWEAYELYKKNEYGKYLKDVLDGKYIE >gi|333758476|gb|AFIH01000001.1| GENE 1786 1775021 - 1775497 407 158 aa, chain + ## HITS:1 COG:CAC2233 KEGG:ns NR:ns ## COG: CAC2233 COG0482 # Protein_GI_number: 15895501 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain # Organism: Clostridium acetobutylicum # 2 150 3 149 355 162 56.0 2e-40 MKKALIAMSGGVDSSVAALLMKEKGYDCIGITMKLYDSETGQACRSRTCCTLEDVEDARQ VASTLSIPYYVLNFKDDFQKKVILPFVETYENGGTPNPCIRCNRFMKHEKLYKKGEELGC DVIVTGHYARIRYDEEKKRYLLLKAKDEKKIKATCFTS >gi|333758476|gb|AFIH01000001.1| GENE 1787 1775482 - 1775835 273 117 aa, chain + ## HITS:1 COG:RP306 KEGG:ns NR:ns ## COG: RP306 COG0482 # Protein_GI_number: 15604175 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain # Organism: Rickettsia prowazekii # 2 110 153 260 358 106 49.0 1e-23 MLYFLNQEQLKHSMFPLGEFETKEEVRAIAEKNGFYNADKPDSQDICFVTSGDYGDFLEK FRGKPYPKGHFVDEEGNKLGKHRGIVRYTIGQRKGLGLALKQPMYVAGKDLKKIKSS >gi|333758476|gb|AFIH01000001.1| GENE 1788 1775895 - 1776119 211 74 aa, chain + ## HITS:1 COG:lin1547 KEGG:ns NR:ns ## COG: lin1547 COG0482 # Protein_GI_number: 16800615 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain # Organism: Listeria innocua # 2 70 296 363 371 59 44.0 1e-09 MDAPKEEYAVTVKTRYNAKPVPAFVSVKEDGTVLVRFAAPERAVATGQAVVLYDGELVVG GGTITKAIKRMRSD >gi|333758476|gb|AFIH01000001.1| GENE 1789 1776116 - 1777765 1264 549 aa, chain - ## HITS:1 COG:mll9509 KEGG:ns NR:ns ## COG: mll9509 COG3706 # Protein_GI_number: 13488377 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing a CheY-like receiver domain and a GGDEF domain # Organism: Mesorhizobium loti # 354 536 171 349 354 121 37.0 5e-27 MDFKGYDKKIQEIIELVEKQYTLFDEEIFHNLGLLLGIAEELEDDALAGYVYYQLADAYY SFHFDVEGMQKYLSLGIKVQQETQDFTLLAKSYNLLGITEFLRGNFGLAFDYYMSALDYC KSLTTKDSGLLGIINSNIARLYFMLKDYDHGRFYAEEALYEISGNTVDSSYVSNMISIYT FLGNIYLSRNRDVHAAQACMESLLEIARNFGYERELLSSVDILTFSIRLAHYGNKITERD MLIHRFSDKELLSALRTNMMEDVCDLADFFLEIDKVEECRKVLELLERKLSEINLPEIEK RFIESKIRYFEKCGDLEKRNETSYRFYSLMKQQEMEEISAFLFALGIRQDLEDLKEQNAF MEEENVRLTKKAEYDELTGLPNRYHLSDFSDAAFERAYNARTPFALEMVDVDYFKQYNDF YGHQKGDECLKLVAGEIKKLCQKHPGIYAARYGGDEFVLIYENMRDEEVLRYAKELGDGV KALNLQHSEKEGGVVTISQGIRNSIPSKKNRVWDYTFSADTALYQVKSKERGGIKLIHKA KLEGERMYV >gi|333758476|gb|AFIH01000001.1| GENE 1790 1777893 - 1779242 1236 449 aa, chain - ## HITS:1 COG:BS_yjeA_2 KEGG:ns NR:ns ## COG: BS_yjeA_2 COG0726 # Protein_GI_number: 16078275 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Bacillus subtilis # 141 332 23 213 217 145 35.0 2e-34 MADKRKLGSGEKKFRDRSQNYKSSRNVHSNIKRKRVLTEEEKRILMRRRARRKRQAEQKK ARIIFALVLVFCLFVVFQVFAMAFRFIEKSRKAQKEESVTVVESSVESSPAESTEESTEE ESPSEGETNAEGMVFSGGRYIDPSKPMVALTFDDGPDVQVDGVLMDELEKVNGRSTFFVV GQRVEKFPEDIKNTVERGHEIGNHSYDHDIHLSSKGQDYIRNEFDKTDDAVEKAAGVRPA LVRLPGGNISNDVKAVVKKPLIFWSIDTEDWRSRDAEKTQNSILSQVKDGDIVLMHALYL STAQACKTVIPELHARGYQLVTVSEMIHFRGQNVQGGNGVQYKNFPPVETAAAESSTAST VAETVKETSVQSSSHSVKESSKSSETKKETKSAKTASKSTESKSNTEATKESGNIVESPG ITVESKTVEKSTKESAGNIAGAIDAEDPQ >gi|333758476|gb|AFIH01000001.1| GENE 1791 1779433 - 1780581 825 382 aa, chain + ## HITS:1 COG:no KEGG:Closa_2524 NR:ns ## KEGG: Closa_2524 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 372 1 373 389 280 39.0 9e-74 MDKKGINEIKKCFKKEDCRIDRIRTCFINEEGEVLSRFSDSFYALEDNEVFKYCELFKRS LSGKFGRELYTLEFPLKEEEEGGKQDALFRLNESELKEEALSESFFQKINEIYSVPGKKL LILAHGIYDVPKKTSDGLSLEDASDTVYRFTLFLLCPVSLLKEGLCFDKEKDSFIARSED FVVQKPEISFLYPAFHERGADIHSLLYRTKKREEGLDSITEELFGIGLPYGEKEQKIQFS TLVQEVLKKDCNFENIRLLQEELQEIKEQSKEEEKEQSLSKSRIRQLLENAGASEEGLAN FSALYDNCLGENDSAFYAENLVDKNLELKSENLQFKIKNEISAILESRMIDGKEYLLLPI SDNLEVNGIPIRRKLEEGEVCD >gi|333758476|gb|AFIH01000001.1| GENE 1792 1780572 - 1781291 589 239 aa, chain + ## HITS:1 COG:BH3273 KEGG:ns NR:ns ## COG: BH3273 COG1187 # Protein_GI_number: 15615835 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Bacillus halodurans # 1 234 1 233 238 187 44.0 2e-47 MRLDKYLSDMGLASRSDIKKEIRKGLVLVNGEIIRDSSFSVPLHASVSYRGEEVCYEEFS YYMMNKPIGVLSSTEDRKQKTVLDLITEKHRKDLFPVGRLDKDSEGLILIMNDGQLAHTL LSPKNHIEKRYYIEIPVLLEDSDIAPLRFGIQYDKDLIAEPAKVRILSAEKEKTAIEIII TEGKFHQIKKMFLALSENYVVTKLKRLSMGKVVLDENLAPGDYRRLSTEEIEALQRALE >gi|333758476|gb|AFIH01000001.1| GENE 1793 1781319 - 1782920 1447 533 aa, chain - ## HITS:1 COG:FN1559 KEGG:ns NR:ns ## COG: FN1559 COG3263 # Protein_GI_number: 19704891 # Func_class: P Inorganic ion transport and metabolism # Function: NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain # Organism: Fusobacterium nucleatum # 1 527 1 524 527 405 45.0 1e-113 MNQILLLSGVVIILSVFLHKLSMKMGVPVLLAFLLLGIVFGIDGVFKIHFENFELSGSVC SFGLIFIMFSGGFGTNWKEAKFVAGEAVLLSSLGVVFTALSVAAFCTLLLHMEFSWGLLL GSLIASTDAASVFSILRSRRLSLKDRTASLLEFESGSNDPMAYMMTLLSLELVQGTVKIS EMLSMLFLQIVLGLLIGGVIAFFALYMMKKIAVLTDGFELIFVLGAVLLSYALSTSLGGN GYLAVYLTGIILGNQKIKQKKEMVQFFDALTGIMQMLLFFLLGLLSTPSRLPGVAFNAIG IFLFLTFVGRPMVVFTLMHFFPASRNKKLLLSFAGLRGAASIVFAILAVDTVGRGDYIYH LIFLIVLLSILLQGSFLPKVSEKLDMIDAEGDVMKTFTDYTEEKEVQFIEFQVPKGHSWA GEKIKDIRMPPETMVILLERDGKKDIPNGDTEILVGDRVVIASAKPALSSDLEIIELEVD YGSIYAEKRIAEIPRDDSERVMLIERGEEVLIPRGDTLIQVGDVLVMYRLKKG >gi|333758476|gb|AFIH01000001.1| GENE 1794 1783031 - 1783972 820 313 aa, chain - ## HITS:1 COG:yeiC KEGG:ns NR:ns ## COG: yeiC COG0524 # Protein_GI_number: 16130104 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Escherichia coli K12 # 1 299 1 295 313 72 22.0 8e-13 MEERIGILVFGAVFVDIKGYPFSLYRADGRNAGKVVKVHGGVSRNIVEDIANVELRPTFI SVVDEDGIGEEVVQKLTRHKVNTRFIKRISGGLGTWLAIFDTEGELMGSISQRPDLSSLE EVIREEGDYLFSRCDSVIIEIDMDSKLLKLIFNLAEKYHKKVYAAVSNMSIALERRDLLK TTACIVCNQQEAGMLFSEEFENMDLEAKLSTLSSLVVKAQFPQMIMTLGSEGAIYAEQNG NAGHCKAKKVHVIDTAGAGDAFFAGVAMGLTYGKNLMEACEIGTKLAASVVGTSENVNPR YLPEELGLESLTE >gi|333758476|gb|AFIH01000001.1| GENE 1795 1784125 - 1790475 5529 2116 aa, chain - ## HITS:1 COG:BS_bpr_1 KEGG:ns NR:ns ## COG: BS_bpr_1 COG1404 # Protein_GI_number: 16078594 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Subtilisin-like serine proteases # Organism: Bacillus subtilis # 15 324 218 533 535 245 44.0 7e-64 MVHGDKVWEEYQITGKGVTVGIIDTGVNYKLPAIKNNYKGYDETSGKFDKSYYKDFVDGL PEPMADHVNDHGTHVAGTIIGAEGENLNRIGVAPGAKFISARAINDQGGETSNLLAAAEW MLEQKPDVINNSWGGDSDDNRWFYDIAEAWKEAGIVGVFAAGNQSGREGVPGLGTVANPG NMLNVLTVGAVDINKKLGTFSKKGPSAFDDTKKIIKPELVAPGVQVRSLDATGNYVSWNG TSMATPHVVGVIALLREADPNLSVEEIISLLESTAEPLSDAQYKGSPNMAYGYGLVNAYD AISKIKGKAIGKIYGKVLKEGQDHTAATGEAESEKEAYLGRDYRVSALLKDDVSIREAKA YFSFNDETEEQSIALNLQSGVQNDGIYTGEIQAELLKEGVLHLRIAATDFAGNVTEIRQA VSVHPGASLPWDFDFEKDLSGFLLKGNWALSKRESSKEPTLPDGSTQYIGIDGGSPIFTA SVESSLELPPMDFSAFSKGDNFCLTADVYNSFQGICRAEIQARLASEKEWKTVYQTVLRP DITERSWERNSYSLAEYAGAGEPVLLRFYFLGRGEGAGWYLDNLHIGLGDTLPPKKVEGL KAEMEERGIRLSFTMNEETDMKEYAIEKKASGEEEFREIAILPQGFKKKFIDEKGVKTHY EMSYLDEDVLEGESYTYRIIARDLSGNESESSKTLKVKYGSLRSNVSYNFDDEDGGFQPE ILQYNINDWEHGKIALPADWMEKTLLYRNVYEGLMVNQTSVWGTALNGPMSHGFTVKQDA VLLMPSFTVEKGDYFYFDSFSVRSNIDQNISFTVEIQKEGEDSFATLFSKEKIQGFSAPQ QWHTLSQSLDSYVGETVQVRFRVQADGGLRDEYNVGWYIDNVYVGEKKNSTENSNIATNT TITESEKDEMNAASDTDSAGFSAENEGLFAYDEEENSIDKVEAEHNEKELQGIPLEAKIA VLESGKYTMASVLDGSYSLEHAVNNPEEPFTVEVSAYGYETEVKKIDLSKNPVQEYNFLL KEKKRSEIRGKVLDKDGHSLKGVSLQLLEDSRLPRTETNEEGTFLIQHAYTGAYTLKAYK KGYLPKEISVQLGEEALELPGIVLDEEAKDGKEAETDYGFQVEEKNGAYDTIHFLNGMKG SAVRFQAPFKGAVLKSAKLFLVNNSYYNGNHIEIGVLGYDSEKRLRELAPFRDYGNYSKN AWNEIDLSEYQIKRNEPLYIATSYKTALSDSLGLYYDVNAKEEAKKRSYVYDGAFTETSA LQGVGAFAIKATWAYPDGAEKNPETEVDDSSNNIGGDIHPIVEEDFDFDDATQTIIKYNG KNPEVLIPKIIRGVAVKHIGEGAFNKINQEYETKIKSLIVPEGVETIGKDAFKNNRLEKV RLPESLREIGEGAFQFQYKDSGTDKTDFSINIPKGVKAIHKNTFSSAGSPLLVTSAEGLE KIEKDAFSYNKEVEIHADKLQEIEEGAFGVDKRAIFSYAKVFTKEDSALQSKDGEYLINP TFVNLTAIDAKDSEKVLRRSVVYGPGNSTGYGRNQEVKAFYRMGETVRIEAEDFKKGGQD YTSVEEAKEMTLGKQNSLSFQYYLLSMQLRLPILDSDRNLPGFTLPSGKVKLIQEKNEGG TVTQDEVKANEDGFFALPLPALSEGDKIILSVNGKKPSEYVVEKTPNKKYVVEKGKLLRY LGEEKALQIPTSFSTAGDITEIGDFAFYEKSLDTVEIPVKVNTIGAGAFMNSGLHSFSFA AENVNLASLRIIKEYAFKNNKLQSIEALPELTHVIQKKAFENNALEKLALSKYLGHVGEA AFKNNKIKTISIPGNIEELGKEAFMNNELTSVQFLEPQNAKEDMEGVSHLEEAVFANNAI KEVELGKRIKTVDETAFLGNWGGLPILKTDAEGITATKTYDVLRSDGTLLSLEKKEDSEG KKEDSQKEEKKDSEDKPSGAAGRPSRGSGSAGRSSNASGSSGGNGKVPQVLGAAKDLSEV SSIDALPKNYQGEVKLLYGKRVPSQVVDPIWVMNFRNHRYMLVNQEGEFYKNAWVLVFRH SVTEKTNGLPYAWYHFDENGMMQTGWFEEAGNRYYFSEEEGADIGVMLTKNQEIRGKNYS FEASFGPQMGQLLSNG >gi|333758476|gb|AFIH01000001.1| GENE 1796 1790415 - 1790963 325 182 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|229826669|ref|ZP_04452738.1| ## NR: gi|229826669|ref|ZP_04452738.1| hypothetical protein GCWU000182_02045 [Abiotrophia defectiva ATCC 49176] hypothetical protein GCWU000182_02045 [Abiotrophia defectiva ATCC 49176] # 13 147 22 156 2273 77 35.0 3e-13 MRNIFRKWISGILVMLLILGNVAYTGAFSSYAAIEESEIAKIIGEQKGPYDVMIRLDYFG ADKDALSRKEKAERAQKELLAYLSEEKENGNVEKYEAFYIANGVHAVVEKAEVLYEIAKQ ENVIAVTPNQRIKLIRPVEEEKNPGRKGKSLSRMKEESSGAFPWCMEIKSGKNIRLPGRA LP >gi|333758476|gb|AFIH01000001.1| GENE 1797 1790993 - 1792717 1196 574 aa, chain - ## HITS:1 COG:SP2136 KEGG:ns NR:ns ## COG: SP2136 COG5263 # Protein_GI_number: 15901950 # Func_class: R General function prediction only # Function: FOG: Glucan-binding domain (YG repeat) # Organism: Streptococcus pneumoniae TIGR4 # 28 132 522 620 621 84 41.0 6e-16 MKRKRVKGKSCLGAFLFLSCALSTMGYAGTWKNTGKNWQYLAESGDAQKGWLLDSGTWYF LDENTGVMKDKWLFYQGKWYFLNPQSDGSRGKMLSGWQWVDGYCYFLKEDGELLLSAITP DGYQVNELGQWVSEDGQAIHVEGKGYSTKVVEEENKNPVVAGASRAVPGGSGSQGRRGGS GSGGGGLGGASAVSPAVPKEEKKEMGNAQEESNKKENPAEPPKEEKKPEEKKETPKENEG GKESEVSKLTVTSVKELAAVSIEQGRSYYDNELPTKLELNLSNGKKVEASILSIDKQNVK TWQPGEYLLKVNYNLPEGVEGEKPEVLLRLLVRKKSSFTLEKEEYDVSEDVVLQFHEDQL EEGDTIHLEAGKSEEDYYYKELTEGMEYETDYENNSVILHSDALLKKLYSSVYKDGKLSG SKKVYLDIRRKKKGQSGLSSYSLHFTYRNAEKKDEKEDSKKENLIEAHPGGGVTSFTQRR EDLRFPFYHGNYESLDFGKIGQVRFYVDGSKEELTGLKLFKGYANEDVPEDGYEAILVLP FSTVQEKLQDNQIRIYGEGGGYKIEPFTISYEKK >gi|333758476|gb|AFIH01000001.1| GENE 1798 1793098 - 1795572 2431 824 aa, chain - ## HITS:1 COG:L83620 KEGG:ns NR:ns ## COG: L83620 COG4932 # Protein_GI_number: 15672666 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted outer membrane protein # Organism: Lactococcus lactis # 514 613 235 328 336 65 36.0 4e-10 MKRKRKLLAILMAVAMAWQGLSLAQAEELGSSGVASESTLPSTSESSGVPSEEDIRAAQA KSEEAKVQEAGEAQTMALNAQGATATENSKSIAVNITDASYTDKDGNPYNGSGVHNHSFL GIKVAYSIPDGESPKAGDKTSIKFPDSFTGLQSEDFPITDGGELVATAHYDAQSNTMVLT YSSFVERKSNIKVNFRLSVQVNSAVEPNPKDITGNLTINGSNTFAISGKVHYTGIEKDSD FELVKDANQTLDEATDPQTGNKIKLVRYRILINLGEARTNLTLTDALGDGAFSYYVDDSH PVSVRKGVWERGSFSGTKWNPDPINGKHWDLRNDTKTDGAPHITAIEKEFKQSAPGKKSF QLHLGNVKAEEGYEIFYYAKFDGIPKTNFDYKNNIEVNSDGTSGGPKRAKYDLYVKNSGG SGSGENYVLNIKKVNEDGEALKGAKFAIANSENLLVAQVTTNENGEASVGDLLKDNYTVQ EIAAPQGYILSNEKYTVSADSFDASNTALLKVTNVKSGQKRSVEVTKKWVDAGNKAQLRP NKVTVELLRNGEATGDTLDLSQDNAWKAAFTDLPKYDDNSKLFNYSIREKAVEGYSPAVS GTQGLGFTVTNTINTKISIPVTKVWNGKGDHPASVKVRLLANGKEIASQLLSDANNWQYT FVNLERSKDGQPIQYTVTEDAVPGFSSSISGDANSGYGFVFTNTKLKPNDPGNSGNGGNG GGNNGGGNNGGNNGGTSPSVKPGSKNPSSVLGDSRNASTTTPDAKAQVKGQVKGEGRNPE SKEPEVERDTKTSDQSRALQYLLLFAVSACGLVGYLYNDKKKKA >gi|333758476|gb|AFIH01000001.1| GENE 1799 1795820 - 1798345 2103 841 aa, chain - ## HITS:1 COG:RSc1545 KEGG:ns NR:ns ## COG: RSc1545 COG5001 # Protein_GI_number: 17546264 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain # Organism: Ralstonia solanacearum # 427 839 340 754 776 176 28.0 1e-43 MKSRDGNRLFRLGLLSAGMVFLLIFVVFVLKSWKFYFHTKPKDWAVQKDRQETEEEGQGG RISSKNILLISSDAASEEIIQRQIEGVRAVLDGTEAHLDSFHVRPYSSDDERDATDFYAD MNAYLQKKGIIYDGVLVGDDRSLSLLKQYKDSLFPDIPVIFFSIRDQELAKSVSKNSKMT GYYMFSYMKETLDLATALQVRAKSILAIYDNSYLGMEEGKEFLSLQDQFPDYRFEGINFS QLSREEFIQSIENLDEESILLYLYAGEDEDGNRYPRSQITKLLLSKVSTPLYGHAMDEEI PGFLGGRIVDYRLMAEDATLLLTEILSNRVKIEEQPVTEDSPGTLYVSDRVLTAYRLSGK KLPRGCEIKGGIQDIWRKYRDIVIIASLPFLSLFLFSLYFVLSRMRSRSLFKVLEEENDR LLYEQDQLAHKLRYDYLTELLNRQAALSNMEELLKNSKEFSCVLVDIDNLKELNELRGYE TGDLYLSAVANRLKKMERDYGAVASRYGGDEFLIVFPRAILQEDSLEIKEIQAAFYRSIT VSGETVYMKASGGVACSEGNANPKEVVMSAGIALSAAKTKGKNHFVFYTDELRYRKEKIN QILKMVERAIQQNAFYMVYQPQVECKGRKIVGFESLLRIRNEACSPDQFIPVAEQYGYIT KLGKIAVEQVVRQLARWKDEGRTLCPISINFSSYQIYDDDFVDFLLYQMERHGIPHEYVV LEITESILFEESKQTKAVFKRLVEEGIELHLDDFGTGYSSFAYLPYIPLNTVKMDKSIVD NFLSSNGDVVRNLISIVHDLGMVVIVEGVEEEWQYEKLVEYGCDRIQGYLFGGPVLATEI S >gi|333758476|gb|AFIH01000001.1| GENE 1800 1798591 - 1800267 1850 558 aa, chain - ## HITS:1 COG:CAC3170 KEGG:ns NR:ns ## COG: CAC3170 COG0129 # Protein_GI_number: 15896418 # Func_class: E Amino acid transport and metabolism; G Carbohydrate transport and metabolism # Function: Dihydroxyacid dehydratase/phosphogluconate dehydratase # Organism: Clostridium acetobutylicum # 1 555 1 551 552 644 59.0 0 MNSDHVREGVQQAPHRSLFNALGYTKEEMKKPMIGVVCSYNEIVPGHINLDKICEAVKMG IAEAGGLPVEFPAIAVCDGIAMGHVGMKYSLVTRDLIADSTECMAKAHQFDALVMIPNCD KNVPGLLMAAARVNVPTVFVSGGPMLAGKVHGKKRSLSAMFEAVGEYEAGKIGMEELKLY EENVCPTCGSCSGMYTANSMNCLSEVIGMALPGNGTIPAVYSARIRLAKQAGYAIMHLLK ENIRPRDIMTKNSFENALRVDMALGCSTNTMLHLPAIAHECGINLDMEYANQISDTTPNL CHLAPAGPAYMEDLNEAGGISAVMKELSKKNLLHLDGITVTGATTGENIEKARNLDEEII RPIENPFMPNGGIAVLKGNLAPDTGVVKRSAVAPEMMVHEGPARVFDCEDDAIVAIKGGK IHPGDVVVIRYEGPKGGPGMREMLNPTSAIMGMGLGSTVALITDGRFSGASRGASIGHVS PEAAVGGPIALVEEGDIISIDIPKNKLDMKVSEEELERRRKLWKPRKPKVTEGYLLRYQA LVTSGNRGAILELPKGWN >gi|333758476|gb|AFIH01000001.1| GENE 1801 1800393 - 1801472 985 359 aa, chain - ## HITS:1 COG:BS_yocS KEGG:ns NR:ns ## COG: BS_yocS COG0385 # Protein_GI_number: 16078995 # Func_class: R General function prediction only # Function: Predicted Na+-dependent transporter # Organism: Bacillus subtilis # 44 354 1 308 321 280 50.0 4e-75 MLLRMYKEKSFLFSLYPVHIGNRGRAIWNRTMQKRGLVREEDCMRVLEKLSDFVSKWMAL IVILVAAISLFFPSSVSFIKTAWINTLLGIVMFGMGLTLKPSDFTDVFKRPRDVIIGAVA QFTLMPLLAFLLTKVFRLSPELAIGVILVGTCPGGTSSNVMTYLSKGDVALSVCMTSVST ILAPFMTPLLTLLYAGKTVDVQVVGMFISVIKVVLVPIILGIVVNRFFSKVTEKAVKALP LISTTAIVLIIAAVVSVNSARIMQNGLLIVCVVICHNVLGYLTGYLAARVLKLDTTKCRA ISIEVGMQNSGLATSLAATHFAQYPLATVPGAVFSVWHNISGAILANIFNYSSKHGGKI >gi|333758476|gb|AFIH01000001.1| GENE 1802 1801609 - 1803489 1828 626 aa, chain - ## HITS:1 COG:TM0740 KEGG:ns NR:ns ## COG: TM0740 COG0441 # Protein_GI_number: 15643503 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Threonyl-tRNA synthetase # Organism: Thermotoga maritima # 1 622 60 637 640 515 43.0 1e-146 MEREEFLERYRHSIAHVLAKAMIELYGEEVQYAIGPQIEDGAYYDFWIPKSLTEEDFPTI ENKMREIIKRREPWTREELSREDALKLFAKQKFKKELIEDLPDGEVISVYHTGDDFVDLC RGPHVENSQELMNVAFQVKSVSGAYWRGDEHRDQLQRVYLFVYPDKNALKEHLKWLQEAQ ERDHKKLGKELDLFMFDETAPGMPYWLPRGWKMYQALLQYSREVQRRHGYTEISAPLINN KKLWLISGHWAHYINNMFMVPGVSGWLKADADLSGVMENPNDTSLPEKTVKIQAGSVIYN RENLDTMAAKPMNCPNAMLTYKRRNRSYKELPIRYSEYDVLHRKEKSGQMNGLFRVQEFR QDDDHTFVMESQIEAEIADIISIADEIYNTFGVSYRAELSTRPEDFMGDIEVWDRAEAAL KKILTDKYGEGGFEINEGDGAFYGPKIDLQIKDALGREWQCGTVQLDFQLPHNFGCSFQN AEGEQEMPVVLHRAIYGSLERFIGIIIENFKGSFPFWLSPEQVGIVPIREEHNTYAKKVY DALSEMGIRTEVDYTDKNMKEKIKTYKNYKDPYILVLGDKEMAENTVSINMRGSNKQVNN VPLDVFLKVCAKMQKEHTLELTDDFS >gi|333758476|gb|AFIH01000001.1| GENE 1803 1803567 - 1805021 1649 484 aa, chain - ## HITS:1 COG:CAC0990 KEGG:ns NR:ns ## COG: CAC0990 COG0008 # Protein_GI_number: 15894277 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Clostridium acetobutylicum # 2 481 5 484 485 607 60.0 1e-173 MKIRTRYAPSPTGRMHVGNLRTGMYAYLIAKHEGGDFLLRIEDTDQEREVEGAVEIIRRT LEETGLFWDEGPDNPGSCGPYVQSERVKTGIYMQYAKELVEKGEAYYCFCDKERLESLKT EVNGEILMHYDKHCLALSKEEVEEKLAAGLPYVIRQNNPTEGTTTFHDELYGDVTVENTE LDDMVLIKSDGFPTYNFANVVDDHLMGITHVVRGNEYLSSSPKYQRLYDAFGWESPKLVH CPLITDENHKKLSKRSGHSSFEDLIDQGFVPEAVVNFVALLGWSPEGNEEILSLQDLVRE FDYHRISKSPAVFDMGKLRWMNGEYIKKMDFDKFYERAYPYLKEAAGEKVDLKKIAEMVK SRIEIFPDIPEHVAFFKAVPDYALSLYQNKKAKTTEENSLQLLKEVLPLLEQETDYSNDR LYSVLQEFSTEKGYKTGFTMWPIRIALSGKMMTPAGATEILSVLGKEESLGRLKKAVARL EANA >gi|333758476|gb|AFIH01000001.1| GENE 1804 1805041 - 1807134 1437 697 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|62291006|ref|YP_222799.1| polynucleotide phosphorylase/polyadenylase [Brucella abortus bv. 1 str. 9-941] # 1 694 1 695 714 558 44 1e-157 MYKSYSMELAGRMLTVDVDRVCAQSNGAVMMHYGDTTVLSTCTASEKPRDGIDFFPLSVE YEEKMYAVGKFPGGFKKREGRASDNAILTARVIDRPMRPLFPKDYRNDVLLNNTVLSVDQ DASPELLAMLGSSLATAISDVPFDGPCATTQVGMIAGEFILNPGNGEKAVSDLLLTVAST KEKVIMIEAGANELPEEKMIEAIYLAHETNQQIIGFFESIIAECGKEKHSYESSAIPEAV FEKMKTVVTPEEMEKAVFTDEKQERDANISALSERLVEAFQDDEEALAILPDAIYQYEKK TVRKMILKDHKRPDGRAIDQIRPLEAEVDLLPRVHGSAMFKRGQTQILNVTTLAPLSEVQ KVEGMNEFETEKRYLHQYNFPGYSVGEAKASRGPGRREIGHGALAEKALIPVLPPVEEFP YAIRSVSETMESNGSTSMASTCASCMSLMAAGVPIRKPVAGISCGLVTGESDEDYLVLTD IQGLEDFFGDMDFKVTGTRDGITAIQMDIKIHGLTRPIVEEAIKRAREARLFIMDGVMKD AIAEPRKELSPYAPKIITLQIETDKIGDVIGKQGKTITAIIEETGAKIDIDDNGMVSISG IDLAALERAKEIILSIVNDIEPGQILEGTVVRMMNFGAFVQLSPTKDGMVHISKLSDKRV NEVEDVVHIGDKVRVKVIEVDKMGRINLSMRPQDLAE >gi|333758476|gb|AFIH01000001.1| GENE 1805 1807418 - 1807684 427 88 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227872009|ref|ZP_03990394.1| ribosomal protein S15 [Oribacterium sinus F0268] # 1 88 1 88 88 169 94 6e-40 MITKEKKAELVAKYGRKPGDTGSPEVQVALLTERIVELTEHLKSNPKDHHSRRGLLMMVG HRRGLLDYLKKTDLNGYRALIEKLGIRK >gi|333758476|gb|AFIH01000001.1| GENE 1806 1807913 - 1809544 350 543 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 [Bacillus selenitireducens MLS10] # 247 542 20 315 317 139 32 5e-31 MDGIINVNKEAGMTSFDVLRALKKILREKKMGHAGTLDPMAEGVLLVCVGKATKLVDSLM SEVKVYRAELLLGVETDTEDSTGKRLSEEENCVTKEEVLSAFHSLLGKREQIPPMYSAKK VEGKRLYSMAREGIVIERKPSPIEIFSIELLSLTEPEPFEGLSCRGKHQRISFRVKCSKG TYIRTLCTEIGEKLGTKACMSALTREEVGEFHLKESKTLSEIERYTKEGALSSFLKPALY SKVPTVLTFGKFDGVHLGHQKIFSSVFRIGEEEGLKPAVLSFTMEKGSFFLQGRKEMLST EDEHFTRLKNAGFQEVYLYPLTMEAARMSPEDFVRIILIDALKVKHLVVGTDCSFGYQGA GNVEFLKNLQGKYGFRLTVVDKVLTKSPAGEEVEISSSYIRKALEEGRVEEAAALLGRPY SINGTVVHGKAIGRSLSFPTANIFPKEGKLIPKEGVYYTRVMARGEEYDAMTNIGKNPSI SEENPLTIESHLLNFDKEIYGEKIRISFLERIREQKRFPNLDALKAQLKEDLLTVEQFRK DRT >gi|333758476|gb|AFIH01000001.1| GENE 1807 1809628 - 1810611 787 327 aa, chain - ## HITS:1 COG:aq_1630 KEGG:ns NR:ns ## COG: aq_1630 COG0618 # Protein_GI_number: 15606737 # Func_class: R General function prediction only # Function: Exopolyphosphatase-related proteins # Organism: Aquifex aeolicus # 5 314 9 319 325 117 29.0 3e-26 MREALDSLFEKAKTICILGHTRPDGDCLGSTLGWKNYLKTRFPEKAVTVFLMEANSKFSY LPGFSEIRHDVPKEEFDLALICDCGGYDRLGEYGRLAKNAKERYVVDHHITSSGEEFPHH TILPDASSTCEISFDLMDERYFTKEVATCIYTGIIHDTGVFKYTSTSSHTMEIAGKCMDK GIAFSSIIDDGFFMKTVNQQRVTGKVLLDGRLYMEDRIFASSLSMKDMESFSVDQKDVDG IVSVLRETKEVDGVIFLYEVGNNTYKVSLRSNNTSLDVSAVAAYFSGGGHEMAAGCSLKG DVASILEKIIAELRKQMDAPDFPSNKQ >gi|333758476|gb|AFIH01000001.1| GENE 1808 1810623 - 1811039 364 138 aa, chain - ## HITS:1 COG:CAC1803 KEGG:ns NR:ns ## COG: CAC1803 COG0858 # Protein_GI_number: 15895079 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-binding factor A # Organism: Clostridium acetobutylicum # 6 119 4 117 121 86 38.0 2e-17 MKRQSFKNQRRNEDVRRNLSVLIRNEVKDSRVSPFCDVTGVDLTPDLQYCKVYVSCLGSE ESLGKTIEGLKAAAGFLRRELAQSLNLRHTPELQFVPDHSVEYGSRMDALINKVKLEDEA RPVGEAVNQENRYKEEDE >gi|333758476|gb|AFIH01000001.1| GENE 1809 1811196 - 1813862 2603 888 aa, chain - ## HITS:1 COG:lin1362 KEGG:ns NR:ns ## COG: lin1362 COG0532 # Protein_GI_number: 16800430 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation initiation factor 2 (IF-2; GTPase) # Organism: Listeria innocua # 186 888 66 781 782 577 49.0 1e-164 MLEENKAKGSTENKEEGTVKKKKLAVVFHSQNSVNHKNHPLSGKFSDKAKKAKEQEKKED EKKSPNGRPLPPGTARVTPLKTLNAIQKKKAEEEKKLEEERLLQEQKEREEAAKREAEEA AKKAVEEKAETVEKPMKPKVNKLSGIVAHAVSKDSGEKSFDKERVERRSSAFPKTDRKPG FAKDFSKDKDFSKDGDRRSFDGGRGKAQAAKKPAAQSFAPEIVEKQSRVKHDAVKPAKKT YGNKSFENEKATISQKNRAQRKQNKYGATQSYERDDQVKVKKTGKGAFIKPEVVKTVEET IKSITLPEVITIKELAEKMKQKSADIIKKLFLKGQIVTLNTELSYEEAENIAVEYDILCE MEEKVDVIAELVQDSEVDEEKDLEPRPPVVVVMGHVDHGKTSILDAIRNTNVTSREHGGI TQSIGAYQVSVKVNGESRVVTFLDTPGHEAFTAMRMRGAQSTDIAVLVVAADDGIKPQTI EAINHAKAANTEIIVAINKIDKPTANVEKVKQELMAYDLVAEDYGGSTICCPVSAKTGEG LENLLENIALQADVLELKANPNRKAYGVVIEAELDKGRGSVARLLVQKGTLHVGDVVAVG SAFGKVRAMIDDKGRRIKKATPSMPVEILGLNSVPNAGEIFQVKDNEKEAKAYADTFVSE GKQRMVEESRKKVSLDALFDQIKAGELKDLPIVLKADVQGSVEAVRDSLQKIQNEEVQVK VIHSGVGAINESDINLAIASNAIVIGFDVKPDATAKDIAERENVDVRLYNIIYKAIEDIE LAMKGMLAPVFEEKVIGHAEVRMIFKSSGVGVIAGSFVTDGKVQRGAKARLTRDGEQLFD GNIASVRHFKDDVKEVGTKQECGIVLEGYTDIQEGDQLEVYIMEEVKR >gi|333758476|gb|AFIH01000001.1| GENE 1810 1813846 - 1814172 388 108 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227872004|ref|ZP_03990389.1| ribosomal protein L7/L12 [Oribacterium sinus F0268] # 1 106 1 106 107 154 71 2e-35 MQNRMYGLIGLAMKAGKIKAGEFSVEKSIKQGKARVVLVAGDASENTIKKFENSCFHYKI PFFRVGTKEELGKIIGKEMRSSLSIEDEGFGERIIGFMNGGNADVRGE >gi|333758476|gb|AFIH01000001.1| GENE 1811 1814162 - 1814431 235 89 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|206900953|ref|YP_002250931.1| ribosomal protein L7Ae family protein [Dictyoglomus thermophilum H-6-12] # 1 86 3 88 98 95 54 1e-17 KMKVEPLRSCIGCNEKKSKKELLRIVREEGGTYSVDVSGRKNGRGAYLCPMLSCLEKAEK RKAFFRAFKENIPEDSLKKLREEIEEIAK >gi|333758476|gb|AFIH01000001.1| GENE 1812 1814458 - 1815597 687 379 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|17988250|ref|NP_540884.1| transcription elongation factor NusA [Brucella melitensis 16M] # 2 347 6 351 537 269 42 4e-70 MNNDELRLALDMLEKEKGISKQAIIEAIELSLQTACKNHFGSADNVRVSMNPETAQFSLL ADKTVVEVVGDPNTQISLEDARAIDAGYEPGDTVQVPIDSKSFSRIAAQNAKGVIVQKIR EEERKILYEEYYSMAKQVVSGVVEKDTGRALIVNLGKVDGYLGEGEQIKGEKILPNQRIK VYVVEVKDNPKGPKVMLSRTHPELVRKLFFDEVSELREGIVEIKAISREAGSRTKMAVLS HDDDVDAVGACVGLNGTRVNTIVEELRGEKIDIINYDENPAYLIENALSPAKVIAVIADQ DNKDALVIVPDNQLSLAIGKEGQNARLAAKLTNYKIDIKSESQAQEQGIFDEMGIDYHGE SDSDTEYDEQGSYEDGELE >gi|333758476|gb|AFIH01000001.1| GENE 1813 1815663 - 1816025 414 120 aa, chain - ## HITS:1 COG:no KEGG:Calni_1302 NR:ns ## KEGG: Calni_1302 # Name: not_defined # Def: hypothetical protein # Organism: C.nitroreducens # Pathway: not_defined # 10 112 9 107 157 66 40.0 3e-10 MDETGYCMEVERTKSYLEEILPGMGYILDSVTFTEEAGTHYLRAFIYRQDEEDMTVNDCA MVSRRLSKWLDKEDFIAEEYILEVCSLGFKDNPSEGDELYSEEIGEETDEEIVDETDEEE >gi|333758476|gb|AFIH01000001.1| GENE 1814 1816461 - 1817714 1494 417 aa, chain - ## HITS:1 COG:no KEGG:bpr_I0590 NR:ns ## KEGG: bpr_I0590 # Name: not_defined # Def: hypothetical protein # Organism: B.proteoclasticus # Pathway: not_defined # 2 406 6 404 411 319 40.0 2e-85 MKTKIYVQMLGGFSLSIGEKKLDLGTNNKANFLKLSEIVFLRGLGGVSKRDLIDGVFGHK ALLDENNSLNNLLHQARTQLKKAGMPGKKIIDGKRGVYAPEYDPNYDYVLDVHEFEDICL KAKNEKKPEKKFSYYQQAFALYKGELLPEFATDYWVILESVRLKRLYDDVVDFLGEYFKE QEDYESLFEIYDKANKIYPDNGWQIEMIDALILKKDYKTAYELYTKCAHYYQDELEVPIP EALRSCYERLSDNVRVVTDDIRQIQANIVRKDEKLKSEMGARKMGAYLCPFTSFIDIYHV LRRNLERRGSSIFMMLCTLVDYEGKPIQNQEKLNARAEILEQSLSEGLRKGDVYTKYSSS QYLILLIGTKREDCAIIYQRISRRVKELAGSRAEFRYRIVSLAEIPGILERNNQFEE >gi|333758476|gb|AFIH01000001.1| GENE 1815 1817823 - 1818581 296 252 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 [Bacillus selenitireducens MLS10] # 14 247 2 216 234 118 34 1e-24 MNRPGRRKNGRKKKAVTAVILMAGSGKRMHTEEKKQFLPFHGKPLFYASVERFLAWERCK ELLLIVGAEDQERVEKIIETEGWRKKKNVRAVKGGEERFDSVYRAISYMEGEKRKENTVP AQTEETVFIHDAARPFFTEDLLERLYRESRIAKAVIPGLPVKDTIKLVEDGVVRESLERN LLYSVQTPQAFTFPLLLSAYQKFLAERDLYKKKITDDAMVIELFSEEKVKLVPGEEKNQK ITVQEDIQLLYN >gi|333758476|gb|AFIH01000001.1| GENE 1816 1818769 - 1819788 733 339 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227425790|ref|ZP_03908856.1| SSU ribosomal protein S18P alanine acetyltransferase [Atopobium parvulum DSM 20469] # 5 336 479 817 832 286 44 2e-75 MQDILLLGIETSCDETAAAVVKNGREVLSNVISSQVALHAEFGGVVPEIASRNHLEKIDE VIRLAVKEAGIRFSDLSGISVTVGPGLVGALLVGVSEAKALSYALKKPLIPVHHIEGHIA ANYISHADCKPPFVCLVASGGHSHLLLVEDYGKIKIYGRTRDDAAGEAFDKVARAVGLGY PGGPKLEKIAKEGNPEAFHFPTAKMEDSPYDFSFSGVKSAVLNEMNRKKMLSEEVHVADL CASFQENVTEVLSEKAVRLCRNLGVSRLTIAGGVSANGKLREKMQEKAEKEGISFYSPKI ILCTDNAAMIAAAGYYEWKNGNFADYSVNAYPSLSLTEG >gi|333758476|gb|AFIH01000001.1| GENE 1817 1819804 - 1820709 628 301 aa, chain - ## HITS:1 COG:CAC1584 KEGG:ns NR:ns ## COG: CAC1584 COG1234 # Protein_GI_number: 15894862 # Func_class: R General function prediction only # Function: Metal-dependent hydrolases of the beta-lactamase superfamily III # Organism: Clostridium acetobutylicum # 1 284 5 294 313 306 47.0 4e-83 MLELSLLGTGGMMPLPKRWLTSLMARCNGSSLLIDCGEGTQIAMREKGWSPYPIDTICFT HYHADHISGLPGMLLSMGNAERTKPVRLIGPKGLKRVVDGLRMIAPELPFSLEYVEIAGE VETFQSESFVIEAFKVQHSIPCYGYRLSIPRKGKFSVERAEEQGVPLRCWNRLQHGETVE WEGRIFTPDMVMGEARKGISVVYCTDTRPVSRISEMAKGADLFICEGMYGKEDKAGNAKK HKHMTMEEAARLGREAEPKEMWLTHYSPSELYPEQYKDKFKDIFPVKFAKDGWSREILFE D >gi|333758476|gb|AFIH01000001.1| GENE 1818 1820710 - 1821150 209 146 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|226224682|ref|YP_002758789.1| ribosomal protein alanine acetyltransferase [Listeria monocytogenes Clip81459] # 1 141 7 147 151 85 34 1e-14 MLFREMQEADLEEILALDREIFRSMAYSERDFLYALSGKFDKALVLVEEEEIIAYGIFRL LGTEAELESIAVREAHRGKGYGRLLLEEFLRIGKKEGVGKVFLEVREGNLPGRGLYEALG FQTFGRRKDYYRDPVEDALLMERIIE >gi|333758476|gb|AFIH01000001.1| GENE 1819 1821172 - 1821939 876 255 aa, chain - ## HITS:1 COG:lin2183 KEGG:ns NR:ns ## COG: lin2183 COG1214 # Protein_GI_number: 16801248 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Inactive homolog of metal-dependent proteases, putative molecular chaperone # Organism: Listeria innocua # 4 221 3 222 230 117 36.0 2e-26 MISLGIDASGKVAGVALVRDGELLGEITLCLGLTHSETLLPACISLLEQAKVSIEEIDLI ACTKGPGSFTGLRIAAATAKGLALERRIPILGISTLEMLKENLSYISLPIHVILDARRGQ VYTGSYLGEKLLREEQACPLSEVLEFAESLEGKQIFLGDGVLRYKEEICAVLGEERLIFP EGSSLLQRASSLTLLAERKWNAGEREEFHLEYLRKPQAERQKEAGELKDFQIIEEECAEK VGKTEDRLSAKNYPV >gi|333758476|gb|AFIH01000001.1| GENE 1820 1821936 - 1822364 538 142 aa, chain - ## HITS:1 COG:CAC2838 KEGG:ns NR:ns ## COG: CAC2838 COG0802 # Protein_GI_number: 15896093 # Func_class: R General function prediction only # Function: Predicted ATPase or kinase # Organism: Clostridium acetobutylicum # 10 138 9 137 152 131 48.0 4e-31 MDIWESGREEESFQLAKKLGEKAKKGEIYCLEGELGTGKTVFAKGFAKGLGIEEIVDSPT FTIVKEYQGREKLYHFDVYRIEDVEELQEIGFSEMISGDAICLIEWASQIEEEIPENAKW ITIEKDLEKGFDYRRICMGERK >gi|333758476|gb|AFIH01000001.1| GENE 1821 1822687 - 1823940 1271 417 aa, chain - ## HITS:1 COG:CAC0998 KEGG:ns NR:ns ## COG: CAC0998 COG0460 # Protein_GI_number: 15894285 # Func_class: E Amino acid transport and metabolism # Function: Homoserine dehydrogenase # Organism: Clostridium acetobutylicum # 1 381 4 391 429 267 38.0 4e-71 MKIAIMGFGTVGSGVKEVLELNREQVEKKGGDKIEIKYILARREHIPGVPDELVTTDFSV IEKDPEVELVVEAIGGIHPAYEYIMSCLEKGKHVVSSNKAVVDACGSKLMRTAKEHNCNF YFEASVGGGIPVIRTLYHNYAGENVTEITGILNGTSNFILSKMKDEGSTFADTLKEAQRL GYAEKDPSADVDGFDTSRKTAILLSMSSGMRCRHEDIHTEGIREISDMDMAYAKQMDYHI RLLGSVETVEDKYFAYVAPIMVGKDDPLYFVNGVYNGIRIVGNCLGNTMLYGKGAGKLPT ASAVVSDIIAAARHKNHFQGIGWSEKMIEIEPMGSNAFRYFLRIEGTAEGIQKELKSYFL DGGEALKPIVLKGRQDEFAIVSDILFEEDFLARLRGFEEETGRRVFHFIRMKGMTEE >gi|333758476|gb|AFIH01000001.1| GENE 1822 1823958 - 1825094 1207 378 aa, chain - ## HITS:1 COG:BS_prfB KEGG:ns NR:ns ## COG: BS_prfB COG1186 # Protein_GI_number: 16080582 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor B # Organism: Bacillus subtilis # 2 363 1 362 366 382 54.0 1e-106 MIEFEQFKSELNTKEEPLKQLEQALDLDNKKKRIAELDRMMEEPDFWADAEKGNKLSTEA SHLKDEVEGFLKLKEDYEDIDALIQMGKEEEDASVIPEIKEMLARFSEELENMNTTLLLS GEYDSMNVILRLNAGAGGTEANDWAGILYRMYTRWAERHGFSVKILDYLDGDEAGIKSVT MEVVGQYAYGYLRSESGIHRLVRISPFNAQGKRQTSFVSCDVMPDIETDIDIEVREEDIK MEVFRASGAGGQHINKTSSAVRLIHIPTGFVVACQEERSQIQNKNKAMQMLKTKLYLKEK EEQEAKLAGIRGEVKDNGWGSQIRSYVLQPYRMVKDLRTGEETGNTDAVLDGDIDRFITA YLKWMQLGCPDRKVSGND >gi|333758476|gb|AFIH01000001.1| GENE 1823 1825147 - 1827735 2782 862 aa, chain - ## HITS:1 COG:CAC2846 KEGG:ns NR:ns ## COG: CAC2846 COG0653 # Protein_GI_number: 15896101 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecA (ATPase, RNA helicase) # Organism: Clostridium acetobutylicum # 1 855 1 837 839 907 56.0 0 MNLFERVFGTHSSRELKLIQPKVDKILSLQETMAAMSDEDLKAQTGKFKERLSQGESLDD LLPEAFATVREAAKRVLDMEHFPVQLIGGVVLHQGRIAEMRTGEGKTLVSTCPAYLNALK GEGVHIVTVNDYLAKRDSEWMGQVHRFLGLTVGTVLNEMSTEDRQAAYACDITYVTNNEL GFDYLRDNMAIYKNQQVLRGLNYCIIDEVDSVLIDEARTPLIISGQSGKSTKLYELCDIL ARQLERGEESAEFSKINAILGEEIEESGDFIVNEKEKTVNLTQQGVEKVEKYFHINNLAD AENLEIQHNIILALRANYLMFKDKDYVVKDDEVLIVDEFTGRIMNGRRYSDGLHQAIEAK EHVKVKRESRTLATITFQNFFNKFKKKAGMTGTAQTEEKEFRNIYSMDVIQIPTNRPVQR VDLDDAVYKSKKEKFQAVVDEIEAIHETGAPVLVGTIAIETSELLSGMLKRRGIKHNVLN AKFHEQEAAIIAEAGVHGAVTIATNMAGRGTDIKLDEESRAAGGLHIVGTERHESRRIDN QLRGRAGRQGDPGQSQFFLSLEDDLMRLFGSERLMGMFEALGVPDGEQIHHKMLSNAIEK AQQKIELNNYGIRENLLKYDEVNNDQRDVVYAEREKVLEGDNMRPLITRFITDIVDFYVN ENIVDSDSPKEWDFQGLNDTLMQIIPLGKLNFSEEEFEHMTRDELAQKLKERAIRLYEEK EAEFPNPEQMREAERVILLKVMDQKWMSHIDDMDILRDGIGLQAYGQKDPLVEYKIAGYE MFQEMMRSIQEETVRVLYQIKLEQKVEREQVAKPLATNRDESAVRAPKMREGRKIYPNDP CPCGSGKKYKNCHGQSIYQKEK >gi|333758476|gb|AFIH01000001.1| GENE 1824 1827992 - 1828519 498 175 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|28210085|ref|NP_781029.1| SSU ribosomal protein S30P [Clostridium tetani E88] # 1 174 1 175 176 196 57 4e-48 MKFSITGRTISLTEGLKNMVEKKLGKLDKFFQADTPCNVTLSTQKDLQKIEVTIPVKGSV IRAEESTEDMYQSIDLVVDVLERQIRKYKDKLVARHQSSSFTPEFLEEQESYDEEEIKIV RTKQIDLKPMTPEEACLQMELLGHNFFVFLNGDTGKVNVVYKRKAKSYGLIEPEE >gi|333758476|gb|AFIH01000001.1| GENE 1825 1828695 - 1829987 1127 430 aa, chain - ## HITS:1 COG:no KEGG:Closa_0537 NR:ns ## KEGG: Closa_0537 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 2 414 102 507 514 171 30.0 6e-41 MFLSGYIYETWWGSTGRFMGTFTWLLLFLDYFFLTRFYHFKKGHLVILSLSIFLQACWGI SDFFWMNLFHFFDGVDNKGLWSTFAGGVGNINGYTSLMVSYSGLYAGLYLKEKKGKWSLL FLLMYMFTLLAAMYGMSDNAVFALFVLFLALPFFCFQKKEVLLQCIDLYLAFFLTMKLAV YLIPAEGSSYNVGDKGFFLLLGYSALPFLAIPVLGLLRLLVMKLREEAVQKLLRPLYYAV FCLILCGVIFVFYDANVSHKIAFLTKYKNYFLFDDAWGSGRGFIWKMGMDFFMNKMPLWQ RIFGYGPDSYYMLTNDHYKFEISQSAFGAIDNIHNEYLNILLTIGMAGLIAYFLFIFFSL KTLWEKDREGEESFSGTVFPFATGIALLCYLGQAVINIAVPIVLPIIFILFFLGLGTKCR AQECSDDTAS >gi|333758476|gb|AFIH01000001.1| GENE 1826 1830014 - 1830337 195 107 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227872849|ref|ZP_03991160.1| ## NR: gi|227872849|ref|ZP_03991160.1| conserved hypothetical protein [Oribacterium sinus F0268] conserved hypothetical protein [Oribacterium sinus F0268] # 10 104 14 108 544 85 52.0 9e-16 MDAVAVKVQTKEERDFYKIAERISLLYLGIILLIYPFYFRNGYFDILQAKFSFFWISSLA YSAIMTLFLLLYAFTLKKEERNRIYTKLFFRVEDGRKKPFLSTDVFF >gi|333758476|gb|AFIH01000001.1| GENE 1827 1830473 - 1832167 1904 564 aa, chain - ## HITS:1 COG:CAC3046 KEGG:ns NR:ns ## COG: CAC3046 COG1316 # Protein_GI_number: 15896297 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Clostridium acetobutylicum # 146 420 72 341 341 127 34.0 5e-29 MALEQNRGSRKPHGELLKEKTEKAKEIEAGKRASYIVTLPEEKREEKKETKRKIDNLDVL QMNTARDIEGELDEVYSKKEKRKKSLWKKILLLSVIEILTLVMIVCAGYVVRYMNIKPEV QFNIKNVKNQNIDVTKQEQMQGYWTIAVFGVDSRDGGVGRGANADVQLIVCIDRATGAVK LASVFRDTYLNLAAGSRFAKINEAYADGGPEQAVAALNKNLDLDIEHYATFNWRAVADVI TMLGGVDIDITEKEFKYMNAYIHETSIESKVNVKNPAAEYIKKPGMQHLDGVQAVAYARL RYMDDDFTRTKRQREVISQVLDKAKKADLATLTNVIDTVLPQIAFNVDVGDILELAKGVN KYNIVGSEGFPYDLRTQMMGKKGDCVIPLSLASNVTKLHEYLFGDENYKPSSAVWTFSDK IASDAQSYKNGGGEESSKKKSKHSDDEDEETKKSETKKKKGESESESESESKKKKAETDA DGNLIETTKSSGSKKETEESKSGKSTEESKSQGPTSETKTTSEETKKNSEESKKSETASQ EPSIGKGPDEATGSDDNGPGNIVE >gi|333758476|gb|AFIH01000001.1| GENE 1828 1832308 - 1833723 1050 471 aa, chain - ## HITS:1 COG:STM2103 KEGG:ns NR:ns ## COG: STM2103 COG2148 # Protein_GI_number: 16765433 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sugar transferases involved in lipopolysaccharide synthesis # Organism: Salmonella typhimurium LT2 # 47 471 43 464 464 246 34.0 7e-65 MIKDIQKQLNHLQVLLDAAVLAFSYAFAWYFAIKNPIFPEGHGVLSPRFYFSVMIPLIPA YLFLYWILGLYKPMRTIRMKTAFFRILQSNSVGLLLSASILFAFRKSGYFEHYSTRMLGF FYVFSIFFTTAERYFLRKVLSALRKNGFNQKHIILVGFSPVSDRFIDLCKKNPDWGYHIY GVVDDLAEPGASYRGISVIGGIKMLGDLLSTNTIDEIAITLPLAAYEKLPGIVSTCEKSG VHTKFIPDYQQFIHSKPIAEDMDGLPIINIRNVPLTDPMNAILKRWIDIFGSLVGIVLFG PLMLVVAALIKLSSPGPIIFKQERVGLHNRPFMMYKFRSMGVQKAEEEKKAWTVKGDPRV TWIGKIIRKTSIDELPQFFNVLKGDMSLIGPRPERTQFVEMFKEQIPRYMIKHQVRPGMT GWAQVNGFRGDTSITGRIQCDLWYIENWSLSLDIKILFLTLWKGFVNKNAY >gi|333758476|gb|AFIH01000001.1| GENE 1829 1833771 - 1834748 704 325 aa, chain - ## HITS:1 COG:SA0610 KEGG:ns NR:ns ## COG: SA0610 COG0657 # Protein_GI_number: 15926332 # Func_class: I Lipid transport and metabolism # Function: Esterase/lipase # Organism: Staphylococcus aureus N315 # 52 319 54 316 347 118 30.0 2e-26 MGFFSLLILSIGFFIGMGDSLAGAKKRDKTAVSSASGKVAGKKESFHEFLSYRNVSYPSV YPNHFYDAYVYPSNRRGEVLGTIIYIHGGGFVSGTKDIAGENPYFLAWLRAGFQVISIDY ALAPDYPYPTALHQISYCVEELLRLKDSLGIDERKLIFMGDSAGASLAGQFILTQVNKGY GKMLGISPFMAKKGAKICAFISLSGLLDGTRYHKTGLQENDVAFLSWGQAYFRDKKFYSG KKAEETKLEDYLTKSFPPTFLTDGNIGSFRSQAEDFKGKCRALGIPVYTYFPDGEIPHDY ELRAGSEEAEKSLEKQIHFARFLLS >gi|333758476|gb|AFIH01000001.1| GENE 1830 1834981 - 1836237 1577 418 aa, chain - ## HITS:1 COG:TM0571 KEGG:ns NR:ns ## COG: TM0571 COG0265 # Protein_GI_number: 15643337 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Thermotoga maritima # 104 412 58 353 459 172 37.0 9e-43 MNRGRKFAGLVLSAMLFGTVAGGTMVGVNALSDQYRSGVLAQASNDAGATVFGENASKND SQGSSAQQLNASSANKTAETSGSVSEIAKNAMPEVVSITNTIRYQQYGYTIFGQSGEQEA AASGSGVIIGKNDTELLIVTNNHVVEDSTALSVQFVDGKSYDAEIKGTDRDVDLAVIAIP LSSLSKETLNSISFAKYGDSDSVNVGDQVVAIGNALGYGQSVTTGIISAKNRDISTEGGT ESGLLQTDAAINPGNSGGALLNMNGELIGINVAKYSDTTVEGMGYSIPSKKVKEIVEGLS QKTTRSKVSQDEKGYIGIQGKTVDSSIAEAYNMPKGIYIYKLLTGEGTDNSALQEKDIIT KFDGQSVDSLEELSGLLSRYKAGEKVEVTVQRLSGKGEYQEKTVTVTLGKNSQNPMKG >gi|333758476|gb|AFIH01000001.1| GENE 1831 1836606 - 1838276 1889 556 aa, chain - ## HITS:1 COG:SA1338 KEGG:ns NR:ns ## COG: SA1338 COG0366 # Protein_GI_number: 15927088 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Staphylococcus aureus N315 # 1 556 1 548 549 415 42.0 1e-116 MKKEWWQEKVAYQIYPKSFKDTKGNGIGDIKGIIEKLDYLKELGIDIIWISPCFLSPLAD QGYDIADYYKIDPRFGSNEDMEELISEAKKRDMYILLDLVVNHCSDEHEWFRKAVADPKG SFAKYFYFEEGVDGHEPNNWRSYFGGSVWEKVEGTENTYYLHLFHKKQPDLNWENPELRE EIYKMINWWLDKGIAGFRIDAILNIKKVFPLRGHDFPVDRDDGLSNCTRMITEAEGIGDF LGEMRDRCFKPHHAFSVGEVFNETEAQIPEFIGENGYFSSMFDFRAHSSARSELGWYDAG IVTPNMYRDACFLTQKLVNPVGFISTIIENHDEPRGVSFYIPKEDLSEKAKKFLATMQML QRGLPFIYQGQEIGMENVVLTSIREVDDISTLDEYEVCLREGFSEEEALRIVNRYSRDNA RTPVQWDSSKNAGFTTGTPWLPLNPNYKKINVAQQEKDPESVLSYYKKLTALRKNPEYKE TMVYGDFVPFMADEDRLMAFYRKGEKTLLILGNYRKEERELELPAPVKKLVLSNTEPRIT GRKIVLSGYEATILEV >gi|333758476|gb|AFIH01000001.1| GENE 1832 1838348 - 1840093 1353 581 aa, chain - ## HITS:1 COG:lin0223 KEGG:ns NR:ns ## COG: lin0223 COG0366 # Protein_GI_number: 16799300 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Listeria innocua # 2 581 3 553 553 612 52.0 1e-175 MKKTWWKEAVVYQIYPRSFCDSNGDGIGDLNGITSKLDYLKELGIDVIWLSPVYRSPNDD NGYDISDYEDIMEDFGSMADFDRLLKSAHEKGLKIVMDLVVNHTSDEHAWFLESRKNAEN EKRDYYIWKKGRKLSEVSPEEQKHFASDVVEYKGEKFLPPNNWGSFFSGPAWGFSEETGE FYLHLFSKKQPDLNWENERVRKEVFDMMNRWCEKGIDGFRMDVISLISKPEGLPNQPIPT GAIYGDAGQVCANGPHVHAYLKEMNRKVLSRYDLITVGETAGVTLEEAKKYANSDGTELN MVFQFEHVSLDDNPKYGFKWNTEKMSLVSLKKNLMKWQNGLYEVGWNSIFFCNHDQPRIV SRLGNDSDLYRERSAKCIATFLHMMQGTPYVYQGEELGMSNYPFQDLSEFRDLESINAFH ELTEKAHLDPAELFPMIAFKSRDNARTPMQWDDSENAGFTSATPWIKVNPNYKKVNAKEE LARADSVFHYYQKLISLRHHSDLIVYGDFRLLEEEDPDLFIYERHLDGKVLLCVCNVSEK EREYTPPAEFQNGQVLIQNMPDRDVRAGKLAPYEAYVLAVE >gi|333758476|gb|AFIH01000001.1| GENE 1833 1840142 - 1841173 870 343 aa, chain - ## HITS:1 COG:L0147 KEGG:ns NR:ns ## COG: L0147 COG1609 # Protein_GI_number: 15672707 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Lactococcus lactis # 2 319 21 324 346 127 30.0 2e-29 MVRIKDIAKLANVSPSTVSNVIHKRKEKVSPEIYNRVEKILEEEQYVTHMGARMLSAKGS RLVALILAYKRIEKESIVEDPFVSSVIGAVQLALQEKGYFLLLYSNPDMEDCVKISREWN VDGIILLGAKREGYYKMKESLSVPVVSIDTPFSATDMEYTNIGLEDYEAAKEMTKYLLSM GHRKIAFFSLTEGGELLEKHYIDSERYRGFKEAMDKEGLVAGGWHNLSFVEEIRKKQYFS FYEENFFHATALFFTADIMALEMMRFCMDRGISIPEKLSVVGFDGIKAGRCMHPMLTTME QDSAEKGRRAVRELLSLFEEGEGAYKNIRLPASLFIGETVARI >gi|333758476|gb|AFIH01000001.1| GENE 1834 1841192 - 1842061 956 289 aa, chain - ## HITS:1 COG:Cgl2406 KEGG:ns NR:ns ## COG: Cgl2406 COG0395 # Protein_GI_number: 19553656 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Corynebacterium glutamicum # 17 289 41 304 304 174 38.0 1e-43 MNSTRKGKSLVLGIVGSFIALYVLFPFYLVVMNAFKKQTDIVADPVRFRGVSFAQLLKNL NSVIHNSNFNFWYAFGTSTVITIVSLVLLVLFGSMAAWVISRNHKKTWATAIYMVFIASM IIPFQVVMLPLVSTFRDVGKFIGISMLQSVQGIVFAYLGFGGAMTVFILTGFIKGIPYEL EEAAAIDGCSPEGTFFKIIFPLLRPIITTVTILNGMWIWNDYLLPSLMLGQNGKVKTLPV AVQAFVGSYVKQWDLILSAALLAILPMIIVFLIGQKQIMSGMVEGAVKG >gi|333758476|gb|AFIH01000001.1| GENE 1835 1842061 - 1842978 680 305 aa, chain - ## HITS:1 COG:Cgl2407 KEGG:ns NR:ns ## COG: Cgl2407 COG1175 # Protein_GI_number: 19553657 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Corynebacterium glutamicum # 26 304 11 280 281 181 43.0 2e-45 MRSYFVFFGLYKIPSTAHHRKIVYFLFLFPLLFAFFITVIIPLVLGIGYSFTDWTGIRFT KVVGVQNYLKMFHDPAFIWSVLITFVFVLLNVILINIVGFCLALLCTSKLRGVAFFRAAY FLPNLIGGIVLGYIWQFVFNNVLMSYIKFSMLSSTKTAMLAIIIVYIWQYGGYIMLIYVT GLTQIPGDVLEAASIDGASALQTLFKVKIPMIASTVTICTFLTLTSAFKQFDVNMALTNG AGSVPDFMGAYLSNGTQMLALNIYNTAIAKNNFAVAQAKAVLFFIILAVISLIQVRISNS REVEM >gi|333758476|gb|AFIH01000001.1| GENE 1836 1842789 - 1843160 62 123 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLPHFLEGGTMKGRDTRLESNFLLLLGAVLMFAALFFAFTIKANYSGVMKTIANLRGTLL VCGAILFFSVFIKYRVLHIIERLCIFFFYSPCFLLFLLPLSFLSFWELDILLQIGLEFVL RRW >gi|333758476|gb|AFIH01000001.1| GENE 1837 1843289 - 1844641 1488 450 aa, chain - ## HITS:1 COG:Cgl2408 KEGG:ns NR:ns ## COG: Cgl2408 COG1653 # Protein_GI_number: 19553658 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Corynebacterium glutamicum # 57 407 33 395 443 98 25.0 2e-20 MKKRNLALMTAALVLALTACGGGSSSETKVSGETDKAETTKADEGKSEEKKSSAGKELRL VNGKIEVDAQLKELAAAYEKETGVKVNIESMGGGIDIQGTLKGYFQADNMPDIFVNGGDT DFKNWEGHLVDMSNEKWVSDTEAAYKDKDGKVVGFPYTTEAIGLAYNADVLEKAGIDPKS ITGPDSMKKAFETLDSKKDELGLTAVVGYVAEATNLYWSTGNHLFGVYEDGGLKRDDTKY FDLLEQGKIDKDRFSKYADMVELFNKYADPSLLVSGTYDQQIQNFSAGKYAFVTQGSWIG ATMTNDDKEQYEAAGKFKVGMIPYAFEEGIDTIQTNSPSWWAVFDNDNKEDALKFLQWVS EDEGQKILVEKAGFVSPFKSISYVADDPFAQTITDYTKAGKTSAWHWLGNKEGLAQNALG VVYQDFASGNLDKAKFVDTVEKVVAQYYAG >gi|333758476|gb|AFIH01000001.1| GENE 1838 1844880 - 1845083 108 67 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLLLKKQVRDGPVAQLVRAPPCHGGGRRFESVPGRSFKEVVSISIEMAFLFLTCIVRVFP IIFWTSY >gi|333758476|gb|AFIH01000001.1| GENE 1839 1848401 - 1848589 111 62 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGGSPDFMFGKETSRELSCGKQLSAKVGQYIHKFLKKFVHSCLVLMRLGETPVPIPNTTV KT >gi|333758476|gb|AFIH01000001.1| GENE 1840 1850640 - 1852202 1046 520 aa, chain - ## HITS:1 COG:mll1882 KEGG:ns NR:ns ## COG: mll1882 COG0673 # Protein_GI_number: 13471791 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Mesorhizobium loti # 1 322 14 339 395 114 28.0 4e-25 MRVGIIGTGFIAEVHAGALKACGQEVVAACGNIPEALEAFAKKWGIPREYQDYRDIPLDS LDAVHICTPPNTHYAIVKYFLEKNRKTENGKLAVICEKPLCLDLKEGEELVKLVAESKTP FGVCFHNRFYPAVQKMREIIQGGSLGNVLLVHGSYEQEFHIPPLPYSWRFDAEGGNHLRA VSEIGSHIFDLLRFILKEPVTGVDAVFRNRKEELYRDESGMLWEEKGEGRLPVPMQNEDT AILRLEMQGGTQASISLSEVSFGKLNHMDLHFICEKGRLGWDNDRADKLWISTEKGSTRE LNLGMQPGYSDCFREMFADFYKALSEGNVSAMAKVSEAYENEKVCEMCYLSALRTEKRKR KEFLIRHYAMELLEGEHTFYSECYHSPNRNADGKMPVSTMYGLYCKEPRSYSDFHILSHE EIWHFLEGDPFALYLLYEDGSIETVTLGPDLASGQVLQYTVPVNVIQGACLCPGGEYALY GCTVVPAFTEDCFKTVGKEELQARYGEKKELTEFFRWIKE >gi|333758476|gb|AFIH01000001.1| GENE 1841 1852220 - 1853494 1182 424 aa, chain - ## HITS:1 COG:MK0366 KEGG:ns NR:ns ## COG: MK0366 COG0402 # Protein_GI_number: 20093804 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Methanopyrus kandleri AV19 # 22 422 21 428 431 251 34.0 2e-66 MSIRFYNARILPMRENLDIMEGELWTDRERISYIGPERKESAVPFEREVDLHGNLILPGF KNAHTHSAMTFLRSYADDLPLLDWLQKQVFPMEAKLTGEDIYLFSKLAILEYLSSGITSC FDMYFHPEVMARLAVDTGFRTVLLSGLSNFNFSLEEMREAYQKFNAYHPLVSYQLGFHAE YTTSKELLEGIARIAQEFKAPVFTHNSETKGEVDGCMERYGMTPTALMDSLGMLDYGGGG YHCVYMSDADLDIFQKRGMTVVTNPGSNTKLASGVPHTVEILKKGIPMAIGTDGAASNNC LDMFREMFLVTGLAKLREEDASVVSAEEVLKMACVNGARCMGLKDADCLSEGKLADLFVL DLHQPNMQPVNSIVKNIVYSGSKQNVALTMVNGKILYERGKYFIGESPEEIYEKANRRMQ ELKK >gi|333758476|gb|AFIH01000001.1| GENE 1842 1853566 - 1854525 986 319 aa, chain - ## HITS:1 COG:SP0848 KEGG:ns NR:ns ## COG: SP0848 COG1079 # Protein_GI_number: 15900735 # Func_class: R General function prediction only # Function: Uncharacterized ABC-type transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 9 318 15 318 318 168 37.0 1e-41 MERIIIDGLSFSLPLFIMAVGGIYSEKSGITNLALEGFQGMGAFTGALAVVLMMNLGIGN SSSQFYAAIFFAILGGALYSLLHALLCIRMKANQVISGVVLNILAMSLTAYLTKALNKGL FHAASDKFVLGVSDKFTVPGLSSIPVLGAFFKDIYPFEVLIILIAFVCWYILYQTRYGMN LRACGDNPHAVDAAGESVSKIRTIAVMFSGALSGLAGICFAYSISGSFSFSIFVGYGYLS IAAMIFGNWTILPTLASCLLFGFARSGGYYLVQKMQMPSSYSDLAMTLPYILTLLLLIFF SKFNRAPRALGETYDKGKR >gi|333758476|gb|AFIH01000001.1| GENE 1843 1854525 - 1855691 1172 388 aa, chain - ## HITS:1 COG:lin1427 KEGG:ns NR:ns ## COG: lin1427 COG4603 # Protein_GI_number: 16800495 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Listeria innocua # 19 370 3 344 350 183 36.0 4e-46 MRNNKAKSKHLLVTLLGQEKTQNVTIPVFAIVLSLIAGAIIILLQGKNPLVAYMNLLQGS GILPKESYAGYKNILTDFCSFLNAWTPMIFASLAVAVALRAGLFNIGVAGQMLTAGFISS VFVGYSNLPSVVAKPLVILIGILVGLALGAFVGILKYRFNINEVVSTIMVNYISQYVIAF FINTYFVNPTSRQSRPVSVASRLTLMDTLVGNLKIDIPLAIVLALLVAFLIQFMLDRTCF GFEIKSVGFSRKASRYAGIPVGKNLVLTMALSGALAGLAGVSYYLGYFGSIQPRVLPSMG FDSVAVALLGNSNPIGIIFFSFFITILSKGSTYMNSASGLESEIASVITGIILLFSACNA YIKYLVNKEKLEMQEKNRPEEVQEGGKQ >gi|333758476|gb|AFIH01000001.1| GENE 1844 1855681 - 1857216 1713 511 aa, chain - ## HITS:1 COG:lin1426 KEGG:ns NR:ns ## COG: lin1426 COG3845 # Protein_GI_number: 16800494 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport systems, ATPase components # Organism: Listeria innocua # 3 511 2 504 513 480 51.0 1e-135 MSEYIVEMKHITKRFPGIVANDDVSLSIKKGEIFALLGENGAGKSTLMSMLFGMYEPDEG EIWIRGKKEEISSPSYATKLNIGMVHQHFKLVENYSITENIILGLPSRDKRLGFLPYVDV KKAELKVAQLSERYGLEVNPKDIIENVGISVQQRVEILKMLYREAEILIFDEPTAVLTPQ EISFLLEIIRGLRDKGKTIILITHKLEEIKQVADRCAILNRGKLIDVLNVAETSTKTMAN LMVGREVNFTVEKAEPKFGNTVLEVQNLTVKNRDGFSVVKNVSFSVRGGEVFAIAGVAGN GQVEIADAIAGLIKIADGKVILNGKDISGESIRKRCLDGISYIPENRQDVGLVMDFSLEN NLVLKTYNNARFSRKGILRAKEIRANGEELIQKYDIRSGQGCQTIVRSMSGGNQQKAIIG REIELNSALMIFVQPTRGLDIGAIENIHKQIIAERDAGKAILLISLELDEIMNCADTIGV IYNGEIQKIADAKELSTNQVGEFMMGVKHEK >gi|333758476|gb|AFIH01000001.1| GENE 1845 1857290 - 1858492 1672 400 aa, chain - ## HITS:1 COG:BS_yufN KEGG:ns NR:ns ## COG: BS_yufN COG1744 # Protein_GI_number: 16080206 # Func_class: R General function prediction only # Function: Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein # Organism: Bacillus subtilis # 29 385 2 339 350 111 29.0 3e-24 MKKTWNVITGVVLAASLLAGCGASGAAKSTTAAAGESATTAAAEEKADAGKTDEAKKGLK IAIVSSPSGVDDGSFNQDNYNGILSFIKKHPDATVTPVREETGDTAAVMQAVNDIVADYD VLVCCGFQFAGIGTVAKDNPNTKFILVDSYPVDADGKEVSLDNVYAMQFKEQESGFFAGI AAALETKSGKVAVVNGIAYPSNVNYQYGFMSGVNYAKAKYDAKAEYVEIPSYAGTDVTNA NVGGNYIGNFSDEATGKVVGKALLDKGVDIMLVAAGGSGNGVFTAVKEAGNAQVIGCDVD QYDDGANGDKNIILTSVLKVMHSNVEKQLEKVLDGSFKGENALLGADTDSTGFVKAEGRQ QLSAETIEKLEDAYEKVKSGEIVPAANFNNMTPDNFTGLK >gi|333758476|gb|AFIH01000001.1| GENE 1846 1858597 - 1859703 1140 368 aa, chain - ## HITS:1 COG:BS_ykrS KEGG:ns NR:ns ## COG: BS_ykrS COG0182 # Protein_GI_number: 16078419 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family # Organism: Bacillus subtilis # 26 362 14 347 353 332 50.0 8e-91 MNQGRLKEEEIAELLSGIENVRLNEEETAVVIIDQTQLPGKKEFLELGDAKALYDAIFEL KVRGAPAIGICAAYGIYVLAQQIQADSGEAFYKKFKEDAEYLNSSRPTAVNLSWALKRME SVVEAHISSSPKEILALLREECRLIQAEDAAMCKAISEYGLSLLKDGDGILTHCNAGPLA TSKYGTALGPLFLGKERGVNFHVFSDETRPLLQGARLTSYELDQGGIDVTLICDNMASIV MKSGKVQACLVGCDRIAANGDAANKIGTSGVAILAKYYGIPFYVLGPSSTIDFSCKTGED IVIEERNPEEIKCKFYEKPMALPSVKCYNPAFDVTDHSLITAIITERGILRAPFTESLKE AFPERAKD >gi|333758476|gb|AFIH01000001.1| GENE 1847 1859787 - 1860629 942 280 aa, chain - ## HITS:1 COG:lin2067 KEGG:ns NR:ns ## COG: lin2067 COG0005 # Protein_GI_number: 16801133 # Func_class: F Nucleotide transport and metabolism # Function: Purine nucleoside phosphorylase # Organism: Listeria innocua # 6 273 4 271 272 264 47.0 1e-70 MTKVYERLQRCYKSIEDKIPFRPRLALVLGSGLGDYAERIEIEASIDYHEITDFPVSTVS GHKGRFVFGHIGSVPVVIMQGRVHFYEGYSIEEVVLPERLMHLMGAEILFLTNACGSANP AYQAGDFMLLTDHILYSVPNPLIGANAEELGVRFPDMSEVYDPALRKEIFACAKDLGISL REGVYMQFSGPSFETPAEVRMAHILGADAVGMSTACEAVAGRHCGMRICGISCISNLGAG LSEEPLSDEDVKVVANRVAPLFKKLVTEAIIRIGKESLRL >gi|333758476|gb|AFIH01000001.1| GENE 1848 1860645 - 1862021 1677 458 aa, chain - ## HITS:1 COG:no KEGG:SpiBuddy_1532 NR:ns ## KEGG: SpiBuddy_1532 # Name: not_defined # Def: hypothetical protein # Organism: Spirochaeta_Buddy # Pathway: not_defined # 83 458 35 411 411 295 45.0 2e-78 MKKSLVGSTVLSIAVAVTLASCGSGGGKQTGETTAKVTESAKEEAETTAQAESKVAEEKP LDENAAKRKGEEEFKDTPEKTDAYLKTYFAVSLPEEPDAKAFSEALKAISEKDADLGAEL SWDNAVSAAVQAAGYEELALTYNAEKAKERLKQYGIEGEGENLSPVACALDVDLITPEEA VQCIKKEKPDKAALDALLMKVADALGKGRNYLGLASDPDIFGKLEKEWSAFQLFDDPTLS EVGKEVVEQKITTGYGLKSAAYDARFLPELTLQYGHSDILHAQQLIGLLDSENINARVQL EPKISIYQYLLDWGPVPDPTPTYEVKKFSDELYLVYAVEYDLKLEFADKEDLMAFDKVIK EFAKKNSENADMKGLIYGSWWQPLYSTVREDMPKEDYHEIYDCVVTNGEYSIHPFTTVEA KDEVVKKLSALHEGLSVNPEKRYVNTAFFNYLTGEDYQ >gi|333758476|gb|AFIH01000001.1| GENE 1849 1862426 - 1862719 81 97 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQNINPAASFLESTLSLGSGLTVLSIKLRYARFLQVPRPPNGFLKRIRRGLFLYSNFFRN QNLLPIELSLSRFRDISFYRKLFSEWTFIVLSSGIFY >gi|333758476|gb|AFIH01000001.1| GENE 1850 1862773 - 1864437 1760 554 aa, chain - ## HITS:1 COG:no KEGG:Closa_3778 NR:ns ## KEGG: Closa_3778 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 2 545 4 556 557 416 42.0 1e-114 MRVLGKKSIGFLSALAMSALFSFAAFAHSVTGKIHDVNITSDKESISLTVDSSGDNTGTD GFIYIFEIKPYQNDLTGRRDFLAKGNIGQDQKFTFTLHAGPGELRLYSAFVPAVKVNGHY EMISDRRYIENPEIVAENQDPALNPGKKGLRVDPNILDDALSLNIKHAGVDIPTQRFFGN GISYTYENKTYKINKELIDQLDAEVKRLSDSGVAVTAILLNAWNETVPELNPKGVTELPK EQAVYYGFNVESEGGFRAVKAMASFLAKRYNGKNGHGKITNWVVGNEINNQYWNYMGDYD VSAYTVRFQRAFRVFYTAMKSVSANDNIMFSIDHYWNMFPEAAPVGKYKGKDIMLAFHNY EAAEGYMDYGLALHPYPYPMTSPNFWDDDKTGKVNDSIDSPVVNFKNLHVITDFMQLPAM RNRKGEVRKIFLTEEGFTSTQGKKDKTTEQAAAVAYSYFIADNNPYISAYLMSRQEDNED ETKHGLAFGLSSIVNHKLVPKPAHEVFKWIDNPSATEGIADFARAVIGIDRWDQLIPGFH FPGREAEKPDVINY >gi|333758476|gb|AFIH01000001.1| GENE 1851 1864645 - 1865739 525 364 aa, chain - ## HITS:1 COG:MT0066 KEGG:ns NR:ns ## COG: MT0066 COG2110 # Protein_GI_number: 15839437 # Func_class: R General function prediction only # Function: Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 # Organism: Mycobacterium tuberculosis CDC1551 # 6 242 7 239 352 162 37.0 7e-40 MKVKIGNIFDSDCKAIVNTVNCVGVMGKGIALEFKKKYPEMYSDYSKKCDSGEVHPGIPY VFQNSNGVQIINFPTKDHWRSPSRLSYVVRGLDWFIENYQFYGISSVAFPPLGCGNGGLD WDTVGPLMYQKLKKLPIEVEIYAPFGVSKNKITDTFLSRNFAEGEVFGKGNPKINPKWYL ILEVVRELNERKYALKVGRTIYQKICYVITRNGVNTGFIFSKGNYGPYSESVKDSITTLA NANLILERTLGRMVSLSVSESFFIDQSKFSEEEWNAMKKTVDLFGRMKDTEQAEMVATVL YAYDELKGRNNLVRDIDVYDYVMSWKPHWKEEKSYMLCDAIHNLAMLSLIAIEHTDLLID TLLI >gi|333758476|gb|AFIH01000001.1| GENE 1852 1865741 - 1866274 210 177 aa, chain - ## HITS:1 COG:no KEGG:Slip_1960 NR:ns ## KEGG: Slip_1960 # Name: not_defined # Def: hypothetical protein # Organism: S.lipocalidus # Pathway: not_defined # 1 174 49 224 225 147 42.0 1e-34 MEKGILSNEKAMGIFHKSIALNEVQARRDIVQVPGGLKLHQYANLYFDPWNPMLSRRRDQ NHEICILKIDKTILNREGVILSDRNASSAYASFYEVETGLEKIDFDLVYARYWTDENYYE KCRRGSIKCAEVLVPYRIPPQYIVAAAVVSEEAKAKLNANAYTGKIVIEPRLFFRRS >gi|333758476|gb|AFIH01000001.1| GENE 1853 1866809 - 1867408 278 199 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0424_1212 NR:ns ## KEGG: HMPREF0424_1212 # Name: not_defined # Def: hypothetical protein # Organism: G.vaginalis # Pathway: not_defined # 4 189 55 230 339 258 74.0 1e-67 MATRFSEQVKNNSEKFDDDFMFRLTKSEFENLISKKSTSSWGSRRKLPYAFTEQGIYMLM TVLRGELAVRQSKALIRMFKQMKDFIVENQDFINSKDLVQISIQTNQNTNDIKQNSREIS ELNSKMNTLATKEDLKKVMDNFIDPETYRHFLLMNGDKIEADVAYTKIYKSAKKSIYLID NYIGLKTLENSTKQREELG >gi|333758476|gb|AFIH01000001.1| GENE 1854 1867537 - 1868736 948 399 aa, chain - ## HITS:1 COG:SP0298 KEGG:ns NR:ns ## COG: SP0298 COG1373 # Protein_GI_number: 15900232 # Func_class: R General function prediction only # Function: Predicted ATPase (AAA+ superfamily) # Organism: Streptococcus pneumoniae TIGR4 # 2 397 4 401 402 312 45.0 7e-85 MITREEYLNKLKALKDKHIIKIVTGIRRCGKSTLLLQFQDWLLEQGVEKSQIIFINFEDL EYEDLNDYRSLYQYIKENLKKNIKTYIFLDEIQNVDKFPKVLDSLLLNPDVDLYVTGSNA YMLSSEIATLISGRYIQIEMLPLSFKEYCLAKGGFEDRITKYTEYLVSSSFPYTLALDSE PNIIRDYLESIYNTIVIKDIMNRKQVTDSMMLQSVLKFIFDNIGNPLSTKKIADTMTSDG RKIDSKTIEKYLMALKESYVIYQAKRFDIKGKQYLKTLEKYYVVDIGLRYMLLGKKAMDA GHILENVVYLELLRRSYDVYVGKVDSFEVDFVAQNQEGNHYYQVALTVREETTLDREIRP LQMLPDDYPKMILTLDDDPPRDIEGIKIQNARDWLLDLK >gi|333758476|gb|AFIH01000001.1| GENE 1855 1868902 - 1869036 137 44 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNTLATKEDLKKVMDMLTKNILDDFRNDYPNFLKITIFGIKSTK >gi|333758476|gb|AFIH01000001.1| GENE 1856 1869597 - 1869932 195 111 aa, chain + ## HITS:1 COG:SP0917 KEGG:ns NR:ns ## COG: SP0917 COG3547 # Protein_GI_number: 15900797 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 1 107 1 104 238 80 42.0 1e-15 MIFVGIDVAKDKHDCCILGPDTEELFQIFTIRNNSDGYGELFHKIESVSKDKSQIKIGLE ATGHYSYNILGSLLDHGYHTFVINPLHTNLYRKGQSLRKTKTDKVDARLHC >gi|333758476|gb|AFIH01000001.1| GENE 1857 1870239 - 1871186 435 315 aa, chain - ## HITS:1 COG:no KEGG:HNE_2073 NR:ns ## KEGG: HNE_2073 # Name: not_defined # Def: hypothetical protein # Organism: H.neptunium # Pathway: not_defined # 19 306 55 352 365 71 21.0 5e-11 MKYIFRGTAFISGFCIFMLLLTILLPDPFGRAYQRALVYQYKYYQSLQGNKITFVGNSSL SFGLDLDRMEALTGRPCAILGNHGGYGMSFLMEMSKSNMQEGDIIVLELVENYIDTCGED LLLTGIGHEYEMYKFFIPEVRWKIFSYYPSYLKEMILYDLNGGYEPYVIYSMDSYDERGN MILDRPECVIPDPYTKEVAEIYTYQTYSGKAWNPLWVKYVKDYIAYCNLHGVKVYITLPC CYDKAVLSSKEDIDAFDGMLKKTFGAAVISKQSDYIFDRKYFFNGIMHCNNTGAKYRTER IYQDLLNAGALPASP >gi|333758476|gb|AFIH01000001.1| GENE 1858 1871198 - 1871395 107 65 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDFLLFGVAFCTLFDGIERKEKLSEWICSRNIVVRWILLYGILALTVVFFPVRSADASNF IYFNF >gi|333758476|gb|AFIH01000001.1| GENE 1859 1871371 - 1872771 737 466 aa, chain - ## HITS:1 COG:PA3548 KEGG:ns NR:ns ## COG: PA3548 COG1696 # Protein_GI_number: 15598744 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted membrane protein involved in D-alanine export # Organism: Pseudomonas aeruginosa # 18 441 19 390 520 208 34.0 2e-53 MSFLSIRYLCFLCILFFFYFLLGTRKKEYRWMVLLVASLVFYGFYSIKYSLFLLFSIVVT WGASIGIQRCNQLEKTELLSFPSITKEQKKKIRSSYEKRKKLWVLLAILLNVGLLVVMKY LNFSIGVVHVLTGWNIAPLGWVVLPLGFSFYTFQSLGYCIDVYRGTVEAQPSILKYALFV SFFPQLSEGPIGNYEELFPQLMEGQPFEYDRFVKGLIRMLIGFFKKVVIADRLALFISPV YENYHDYSGIVLFLATILYSFQLYADFSGYIDIALGTGECLGIHMMENFETPYFSSSITE FWRRWHISLGVWFRNYLYYPILRSEALTRLGKNLSKSGKKKLASSLTATIGLLVTWTVIG MWHGAGYKYLAYGWYHGFFIILAVWMSDGYKKAKAFFHIQDNSLWKIFQIARTFFLVTIG YVIFRAGSLGIAVGIYKRMLSAFYYKGALSGLSVLSRGGWIFYFLE >gi|333758476|gb|AFIH01000001.1| GENE 1860 1872773 - 1873126 328 117 aa, chain - ## HITS:1 COG:CAC2192 KEGG:ns NR:ns ## COG: CAC2192 COG0346 # Protein_GI_number: 15895460 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Clostridium acetobutylicum # 1 116 13 127 128 83 40.0 1e-16 MDKAVKAFLNLGYTLVQDVVLDDYRQVTICFMEKDGYKIELVSPVSKESVVFDLMKRVGN TPYHICYETEDMDDQIAALLAQHYVICSEKHEAIAIAGKRVCFLIHPFIGMIELVEV >gi|333758476|gb|AFIH01000001.1| GENE 1861 1873162 - 1873404 387 80 aa, chain - ## HITS:1 COG:no KEGG:Hfelis_00140 NR:ns ## KEGG: Hfelis_00140 # Name: not_defined # Def: acyl carrier protein # Organism: H.felis # Pathway: not_defined # 1 80 1 80 82 67 41.0 3e-10 MTREEVLEKVNAVIQDVFDDDSIRVSDETVASDVDGWDSLMHITLIGTIEDEFDIKFAMK DVVGMKNVGQMVDLIMEQLD >gi|333758476|gb|AFIH01000001.1| GENE 1862 1873407 - 1875197 1515 596 aa, chain - ## HITS:1 COG:SMc01554 KEGG:ns NR:ns ## COG: SMc01554 COG3882 # Protein_GI_number: 15966058 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Predicted enzyme involved in methoxymalonyl-ACP biosynthesis # Organism: Sinorhizobium meliloti # 194 562 225 595 651 305 44.0 1e-82 MRELEYPFDSELIRKKRLKYRKALLSDTTTKYLEKRIAILGGSTTDEIKNMIELFLLNVG IEATFYESEYNQFYEDGMFDNARLVEFKPDLIYIHTSSRNISNWPKTADKPEDVKALLDA ELERFRGLWDHLFEKYHCPIIQNNFELPFYRVLGNQDAVMLQGKSYFVNQLNEGFYQYAR ERENFFIHDINYEAASYGIAEWSNPFYWHMYKYALAVPAIPFTAYGVATIIKSILGKNKK VLALDLDNTLWGGVIGDDGAENIEIGQETALGQTYSEFQNYVKDLKGIGTLLTVISKNNE DVARSGFERPDSVLKVEDFVSFKANWEPKDQNLLAEASELNLLPESFVFVDDNPAEREIV RQGILGAAVPEINRVENYIQILDHAGYFEPTKLSEDDLKRNEMYLENAKRNHAQLAFTDY GEYLKSLEMTGTIKPFQDLYMSRIAQLSNKSNQFNLTTRRYTQAEVEETAKDGRHITLYG KLEDKFGDNGVVSVVIGEIKGLELHIDLWIMSCRVLKRDMEYAMMDQLVEEAQARGLQSL YGYYYPTAKNAMVRDFYSTLGFDKISEDEAGNTCWKFDLTKPYTKKNKYISVNEGE >gi|333758476|gb|AFIH01000001.1| GENE 1863 1875441 - 1877030 1500 529 aa, chain - ## HITS:1 COG:SP0117 KEGG:ns NR:ns ## COG: SP0117 COG5263 # Protein_GI_number: 15900059 # Func_class: R General function prediction only # Function: FOG: Glucan-binding domain (YG repeat) # Organism: Streptococcus pneumoniae TIGR4 # 25 208 543 705 744 69 29.0 2e-11 MRKQTKLVAALSATALLAIGASAVTFAAGWNNTTGNWQYLDNDGTPIADAWRKSGDYWFY LGSDGNMATNEVVQNNNDFYYVNQDGAMVTNQWVAFDVESDDTNADHRWMYFGADGKAYR DSNEKLTISDIRTINGKKYLFDQEGYMLYGWLGNESALVTGDDAWESAKYYYGGFDDGSA QHGWVQLSVMKDGDETTAWFYFNDNGQITKNTKKTINGVTYFFGKDGRMIEDWSNLKKTT VGSDSVLLPAASGSNAIVYVNGDGGARKNQWIWAVPSEELNLKDYENDTYSWWWADASGK IVKDTTKRIKNKIYAFDEVGRMISGLQASADGRTNFTDESTAHMSISDMEAKDYLAATFA GDIYYFSDDYNKDGSRKTGYQKVSFQDDDYQMYFLNNGKAADGYVSKIKKYVNKGILLAA NNDDSNYGFVKTGTTVRDLASANTVVEYFDDVVRGLGVTDITTPTNYVLVNSSGTVQKNK GNLKDMNDVYYVTDKDGKVIYASYKKLYTSQSTDHNHAITVGGRTYYTE >gi|333758476|gb|AFIH01000001.1| GENE 1864 1877340 - 1878554 500 404 aa, chain - ## HITS:1 COG:no KEGG:SUN_1091 NR:ns ## KEGG: SUN_1091 # Name: not_defined # Def: hypothetical protein # Organism: Sulfurovum_NBC37-1 # Pathway: not_defined # 1 404 423 824 826 378 46.0 1e-103 MSAGNVLPNEFNELAKEVYPEVNELHSVENPGQSWNALTIGAYNQDVDIQHEDFSDFAPL ADVGELSPYSATSVIWDKKWPIKPEILLNGSNVATNGTDYSECPDFSLLTTGKDYSKHRF STIWATSSATAQAAWMASQIYVEYPDIWPETVRGLMVHSARWTEKMRRQFCNDEKKRSGR HNLVRSCGYGIPNLNRAIQCMNNSVNIISEEILQPYKKKENGSNSMNEMHLYTLPWPKEV LRDLGEVDAELRVTLSYFIEPSPEAVGWKDKYRYASSGLRFDVINNNETLEDFKKRINVE ARGDDKKDKGDGSSGSDRWFLGKKVRDVGSLHSDFMKLTGVELSEINQIAVYPVSGWWKE RGYLNRFNDKIRYSLIITISTPNQDADLYTPIISQIATPVEVNI >gi|333758476|gb|AFIH01000001.1| GENE 1865 1878608 - 1879579 402 323 aa, chain - ## HITS:1 COG:no KEGG:SUN_1091 NR:ns ## KEGG: SUN_1091 # Name: not_defined # Def: hypothetical protein # Organism: Sulfurovum_NBC37-1 # Pathway: not_defined # 31 316 30 321 826 191 36.0 4e-47 MAGKKRNIFLHEVNRMSYSAEGAHNTDSFPVRLNPRQHAEHIESLLKQCMEEIPTQTKVE ILRGKEGLYLEFSGETNKELNTKSLENIRKGIRLLNIQEENGTTKATVYVPLDKTEYYLQ KVDEYRKSLAGKGNPKNNDLIRSIEYVRRAKIESFWIGENEFMPAQEAVWCEVWLRYKQN KDVVEAKFKNCCKELNIACKSQKISFPEKMVCLVKANKDNLIDLLRICDDITEFRRAPKA TSFFDGLSRGEQKDWEDDLLERLRIGDSKTTVCLLDTGISAEHPLIKPHIVRGGIQSVDT AWFTSDHDGHGTEMAGRLHGQAL >gi|333758476|gb|AFIH01000001.1| GENE 1866 1879583 - 1880542 478 319 aa, chain - ## HITS:1 COG:AGpT158 KEGG:ns NR:ns ## COG: AGpT158 COG0464 # Protein_GI_number: 16119896 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATPases of the AAA+ class # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 313 18 342 345 242 45.0 7e-64 MASSDQIKSLIKAHLDQNDEKFKTVVLQIAASEARQGHEIVAQELKKYVDNMTRHKNNII KMNNDDSMFLTLMPNDRLSDLIVSKDLEERIKRILREYRNKNKLKQYGYGNRRKILLEGN PGTGKTFTASVIASELGLPLHIVQMDKVVTKFMGETSAKLRRIFDSVDTSIGVYLFDEFD AIGADRGLDNEVGEARRIFNSFLQFIEQDESDSIIVAATNNQQILDQALFRRFDDVLHYL MPSEREIERLFEFKLEGYCPDFIPGEALLTAARNLSQAEIIRVCDDAIKDSILYGDEITE ERLLSFVYERKLAYIPREA >gi|333758476|gb|AFIH01000001.1| GENE 1867 1880840 - 1881367 201 175 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLAILIPLIYYANIVDAVTATFPMNFFRIISGMLLGVTIFYFNQKVRIKLDKRILYILGV LISLVPITMALFQFNERRIQLVCFMISLTLLLDEDGVASRLSTSLCDFSEKLSMVIYITH WSIAVLVKEMIGTKDAVISLFIYYFLTIFLSSILIFFEEKLSKKKMVPLFLEFKK >gi|333758476|gb|AFIH01000001.1| GENE 1868 1882087 - 1883286 870 399 aa, chain - ## HITS:1 COG:SP0359_1 KEGG:ns NR:ns ## COG: SP0359_1 COG0451 # Protein_GI_number: 15900288 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Streptococcus pneumoniae TIGR4 # 2 279 4 281 281 377 62.0 1e-104 MNILITGAAGFVGRNLVENLKNIRDGKNRTRPNIEIEQIYEYDISSTPGELDEYCSKADF IFNLAGVNRPKNQEEFKEGNFGFASVLLDRLKKHNNLSPVMLSSSIQASLSGRFGTSEYG LSKKAGEDLFFQYAKETGAKVLVYRFPNIVGKWVRPNYNSAVGTFCNNIANDLPIMVNDP TVELEMLFIDDMLEEMYDALEGKEHHCEFDGVEAVEKKEGKYCYAPITHKATLGYIVDCL HQFHDQAKTLIMPTIPKGSFEKKLYSMYLSYLPKDKIAYNLEMKKDERGSFTELLKTLDH GQISVNINKPGKVKGQHWHNEKWEIFIVVSGHGLIQERKIGSDEVIEFEVSGEKIQAVQM LPGYTHNIINLSETEDLITVMWANEIFDSNHPDTFFEPV >gi|333758476|gb|AFIH01000001.1| GENE 1869 1883298 - 1884431 450 377 aa, chain - ## HITS:1 COG:SP0360 KEGG:ns NR:ns ## COG: SP0360 COG0381 # Protein_GI_number: 15900289 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine 2-epimerase # Organism: Streptococcus pneumoniae TIGR4 # 1 375 21 393 394 632 78.0 0 MIVVGTRPEIIRLSAVIKKCRRYFDTILVHTGQNYDYNLNGVFFEDLGLENPELYLDAVG SDLGETMGNIISESYKAMAELKPEAILVLGDTNSCLSVIGAKRLHIPIFHMEAGNRCKDE CLPEETNRRIVDIISDVNLAYSEHARRYLADCGVAKERTYVTGSPMAEVLTENLYAIKAS DVHKRLGLKKGQYILLSAHREENIDTEKNFISLFTAINQMAEKYDMPILYSCHPRSKKRL EASGFKLDKRVIQHEPLGFHDYNCLQMYAYAVVSDSGTLPEESSFFTSVGHPVPAVCIRT STERPEALDKACFILSGIDTKGLLQAVDTAVLMIRVEKNGGAVPVPDYTDINVSDKVVKI IQSYVGVVNKMVWRKEV >gi|333758476|gb|AFIH01000001.1| GENE 1870 1884503 - 1885570 867 355 aa, chain - ## HITS:1 COG:SP0358 KEGG:ns NR:ns ## COG: SP0358 COG1086 # Protein_GI_number: 15900287 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate sugar epimerases # Organism: Streptococcus pneumoniae TIGR4 # 8 343 4 339 351 392 56.0 1e-109 MTNITDAFRGKTLVITGGVGSFGSTCLRHFLTTEIGEIRVISRDEKKQDSMRHDLQAHYP NYAGKVKFFIGDVRNLDSVRDVMYGANYVFHAAALKEVPSCEFFPVEAVKTNILGTDNVI TAAVENRVERVVFLSTDKAAYPINAMGMSKALGEKLVGARAQSAFDRSGTVLCCTRYGNV MCSRGSVIPLFIDQIKNKRPITITDPNMTRFLMNLDEAVDLVAFAFENAEPGDLFIQKAD ACTIGDLADGVMKVFGDTEKKIIGTRHGEKLYETLMTREERLRATDMGEYFRIAPDGRSL NYDKFYVEGDVLTEGDEAYTSHNTKRLDVDGVVSKILKTDYVKEELEGRPHVVEA >gi|333758476|gb|AFIH01000001.1| GENE 1871 1885650 - 1887659 964 669 aa, chain - ## HITS:1 COG:mlr5882 KEGG:ns NR:ns ## COG: mlr5882 COG2513 # Protein_GI_number: 13474899 # Func_class: G Carbohydrate transport and metabolism # Function: PEP phosphonomutase and related enzymes # Organism: Mesorhizobium loti # 382 643 11 259 302 136 34.0 1e-31 MKALILNSGLGSRMGILTSNHPKCMTEINSKDTILSRQLKQIVNSGIKEVVITTGYYDEV LINYCESLDMPLQFHFIKNPIYDNSNYIYSIYCAKDFLDDDIVLMHGDLVFETEVFEKLL LSESSCMAVSSTLPLPQKDFKAQIKDGKVIRVGIDLFTDAIEAQALYKLNKEDWKLWLHE IIEFCEKGNTHVYAEEALNALEGRANIMAMDVGDLLCSEVDTPEDLLLVSTKLKEIESRT VYMCFSTDIIHGGHIAIIRKAQKLGKLIIGVLSDEAVASYKRFPLVPASERKLIFENVAG VYKVVEQESLSYRENLEKYKPSIVVHGDDWCQGFQKPIRDEVTSILASYGGKLVEYPYSA DQKYVDIQARARADIAMPDIRRGRLRRMIEAKGLITAMEAHDGLTGLIVENTVVHQDGGG HQFDAIWVSSLCDSTAKGKPDIELVDMTSRFRTIEDITEVTTKPIIFDGDTGGKTEHFVY TVRSLERLGVSMVIIEDKTGLKKNSLFGTEVVQTQDSIESFSEKIRAGKKAQRTKEFMIC ARIESLILEQGMEDALTRAFAFVEAGADAIMIHSRKEDPGEIQEFIEVFRKKNKNTPIVL VPTSFNSIKEEEWKERGANIIIYANQLMRAEVPAMKRAAEIILENHRAQECDEMLMPFKD IICMIPAEL >gi|333758476|gb|AFIH01000001.1| GENE 1872 1887691 - 1888686 476 331 aa, chain - ## HITS:1 COG:no KEGG:TDE1432 NR:ns ## KEGG: TDE1432 # Name: not_defined # Def: hypothetical protein # Organism: T.denticola # Pathway: not_defined # 8 330 5 339 439 125 31.0 3e-27 MTNQFTYILINGFGWSGSSALVDIMREIKGVYVPKKEFRLIKDPHGLRDLDIQINSSIDP LNEDIAIKEFLHFIDIYSRGSRGFRPLGMSYNQDFGSSFQGISREFIDSICDYQYRGYWW YLDVYTPFIPYIIHKILRKLKLYDYQKYTSLFLSVKTEEEFIELTQVYINNIFSSFVNYN DNNFIALDQAIPANRPSWGNRYFNNSKVIVVDRDPRDVYVDLIKEKSLVGYDVAINHDVQ LFVDWFRKVRKEEGKDTQYLKVQFEELVLDYHRIVGEIYDFCGFLPEHHFGKYTRFNPDV SKKNIGMWRNHAYQDEIRKIEKELKEFIYQS >gi|333758476|gb|AFIH01000001.1| GENE 1873 1888686 - 1889129 304 147 aa, chain - ## HITS:1 COG:no KEGG:Closa_0550 NR:ns ## KEGG: Closa_0550 # Name: not_defined # Def: WxcM domain protein # Organism: C.saccharolyticum # Pathway: not_defined # 7 131 6 130 140 209 78.0 4e-53 MHNMNKVKMLEFQQQGNERGHLVIVEGNIDIPFDIKRAFYIYGSDANVVRGQHANRKSEF VLINVAGKSKVKVKDGEGNEAIYCLNRPHTGIYLPTMVWKDMYDFSADSVLLVLASTHYD PEEYIRDYDDFVKEILKDNCGNEGNIE >gi|333758476|gb|AFIH01000001.1| GENE 1874 1889122 - 1889652 293 176 aa, chain - ## HITS:1 COG:VCA0316 KEGG:ns NR:ns ## COG: VCA0316 COG1670 # Protein_GI_number: 15601081 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Acetyltransferases, including N-acetylases of ribosomal proteins # Organism: Vibrio cholerae # 12 149 8 147 178 59 31.0 3e-09 MEHTKEIYFKNVYLRPLMEWDIESLRVWRNNPDNSVYLNKLPFITSEMQKKWFNEYKSDK DNMCFAIVECKELNRLVGSLSLYAFKEDECLFGKLLIGDKDAHGRSIGLNATIAACTLAF QELQLKRINLFVYADNLAAYHIYLKAGFQVLKESVDSFGRKEYLMCKENEGNNSYA >gi|333758476|gb|AFIH01000001.1| GENE 1875 1889657 - 1890754 588 365 aa, chain - ## HITS:1 COG:alr3012 KEGG:ns NR:ns ## COG: alr3012 COG0399 # Protein_GI_number: 17230504 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis # Organism: Nostoc sp. PCC 7120 # 6 357 12 374 382 317 44.0 2e-86 MIMPNNLKRQYLQYAEEYKRKACEVLDSGWYILGREVSAFEEEWAKYVGAKYCVGLASGL DALWISFRLLNIAEGDEVVVCANAYIACVMGITMNGATPVFIEPDQYDNINADKIEAAIT EKTKAILAVHLYGQACDMTKIMDIAHRNNLKVVEDCAQSHGNHWKGKKVGTFGNVGCFSF YPSKGCGAFGDAGCIVTDNEELAQMFRVFRNYGSEKRYQNMMVGSNSRLDEIQAGLLRVK LTHLDEANEERSKIAARYQKEICNPIIQKPKIRPGADSSWHQYVIHVPRYRDALVDYLKD RGIGTLIHYPIPPHLSEAYAYLGYKKGDFPITEQYANEVLSLPMYNGMTEEEQGLVIETV NSFKG >gi|333758476|gb|AFIH01000001.1| GENE 1876 1890770 - 1892188 374 472 aa, chain - ## HITS:1 COG:PM0507 KEGG:ns NR:ns ## COG: PM0507 COG2244 # Protein_GI_number: 15602372 # Func_class: R General function prediction only # Function: Membrane protein involved in the export of O-antigen and teichoic acid # Organism: Pasteurella multocida # 9 369 4 362 399 63 22.0 8e-10 MAEKKYNIIKAASWYTIGNILIKGINFFMLPIFTRLMSTHEYGVYSIYIAYLTIFETIIL LGLSSTVAIAKYAKEIDFESYMSTVLAIPITLSIIVMAVVNMIIPFWGDILSMNSILWNC LLITSMTGAVCNIIGARLVIDGRYMRYLGYLGIHTIGNVALSLAFCVTIYKAENVHLARV YGSTLSAIISMLYLQVSTKTAFHFQKENIRYALAWGIPLFFHTVATVILTQSDRILIRYF GAYSSAGIYAVATTIITIPMVLQQSLQQAWIPWFYGKLDKKAYQEILWLNDRYIALFTFI IGGFMLVSPDLVHIFTGQNYWPCIYSLIPLALSVFAELMYSIPISVEYYNKNTVYIMTAT LITVILNIILDVLFIRLFGYHGAAYATALSKITLFLMHFRFAKKLDHHPMFHSRVLLISF LFLAGLNLLIVTSINILWIRLILLIILILFGGGYLIGNKEILLKEIRNNTKQ >gi|333758476|gb|AFIH01000001.1| GENE 1877 1892249 - 1892812 427 187 aa, chain - ## HITS:1 COG:MTH1790 KEGG:ns NR:ns ## COG: MTH1790 COG1898 # Protein_GI_number: 15679778 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes # Organism: Methanothermobacter thermautotrophicus # 4 183 3 180 185 169 45.0 3e-42 MVEKFEFHETALKGAYLIHPFYATDERGGFIKDYNIDVFSEYGIQHELKEVFYTISHKGV IRALHFQLGKQQAKLVRCVKGKIYDVIVDLRKESDTFGKWVGYELSEKNRNALYVPEHFG HGYLVLEESIVSYKCNEVFYDKGDSGIMYNDPEIAVQWPFEIIGGIENMIISEKDLKLMS FKEYKKM >gi|333758476|gb|AFIH01000001.1| GENE 1878 1892860 - 1893975 554 371 aa, chain - ## HITS:1 COG:MJ1066 KEGG:ns NR:ns ## COG: MJ1066 COG0399 # Protein_GI_number: 15669255 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis # Organism: Methanococcus jannaschii # 1 371 1 384 386 253 36.0 3e-67 MIKSSRGCCGAEELAEVKEAFEYGYFGLAYKTSEFEKEVAKFLGTDRYVITTNTGTNALH LALDSIGIGPGDEVIMPSFTFVATAQVVEMCGATPVFCEADPVTFLIDIEDCKKRITERT KAIIPVHYAGRPCDMDALLEIKEEYGIRIVEDAAHAFGTYYKGKKIGSFGDITCFSFDSI KVMTCGEGGAIVTDDTAFDDLARKKRLLGIDRKSMHVKDWKKRSWVYDVPTLGYRYHMSN INAAIGLAQIRKVDTFIERRREICHIYDAELRNLSGIEIMPDEYDTITPFMYVIRVKKGK RNELKDFLMEHDIESGISYIPCHHFSLFKRQEDLPVTDLIYEEVLCLPLHYELSDDDVRE VCRWVKEFLAK >gi|333758476|gb|AFIH01000001.1| GENE 1879 1894048 - 1894827 332 259 aa, chain - ## HITS:1 COG:SMb21416 KEGG:ns NR:ns ## COG: SMb21416 COG1208 # Protein_GI_number: 16264991 # Func_class: M Cell wall/membrane/envelope biogenesis; J Translation, ribosomal structure and biogenesis # Function: Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) # Organism: Sinorhizobium meliloti # 1 258 1 254 255 288 54.0 8e-78 MKTVILAGGFGTRISEESILKPKPMIEIGGMPILWHIMKLYSHYGFREFVICAGYKQHMI KEWFSDYFLHTSDITFDYTSGNSEMIVHNKHVEPWKVTIVDTGLRTETGGRIKCIREYLG DEEFMLTYGDAVADVNIQALLDFHHSHGKIGTMSMYNFGQNKGVVEVGAGGVIEAFREKS DMDGDLINIGFMVLKPQIFDFIEGPDTSFEKEPMEKLVRLKELVGYIHNGYWQCMDTLRE KQQIEKLWDSGAAAWKLWE >gi|333758476|gb|AFIH01000001.1| GENE 1880 1894859 - 1896106 405 415 aa, chain - ## HITS:1 COG:no KEGG:Gmet_1327 NR:ns ## KEGG: Gmet_1327 # Name: not_defined # Def: hypothetical protein # Organism: G.metallireducens # Pathway: not_defined # 13 363 15 362 411 95 23.0 3e-18 MIVVINDTLGAYGGTHTLTLRICQWLVKNGYQSVVFCEHDGNEEMKYSLESNNTKIFCFD TENRKKAAEIIQSLGKDQLKVINYMWDKYLDMERLKYERKLSFDNILYCVHYGTFMKGVT YPGVIKRIVRRQFLGVFRKMNRNYALVMMDEDTTEKTSNWFGENCSPNTPFVRIPMLCDE LAEKESVISKGYQGNIVMSAARAEFPYKGYQIGLIREFAKIKKAKSDARLVMVSGGEVED IKTIKAEIEKLPEDIRNAVEYHDWMNYDRLKKYMEECKVFVGMGTAVLEAALKYKPSIPV LYNTYEALASNLLSELPESVVAAKDCKDLATNLILKVFSWDETKYREEAYKSFEAVKNCY DIDKNLKLLLAVKPKSRKSVLTIAEIVFIYALRFIGRIKHAKEKMFDISQIRKEC >gi|333758476|gb|AFIH01000001.1| GENE 1881 1896103 - 1897020 426 305 aa, chain - ## HITS:1 COG:alr3070 KEGG:ns NR:ns ## COG: alr3070 COG0463 # Protein_GI_number: 17230562 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Nostoc sp. PCC 7120 # 2 300 3 294 318 101 28.0 2e-21 MKVSIILNCRNGAEYLKDTLEAIKQQSFSDYEIIFWDNCSTDNSAQIAKTFDKRLRYFWG EEMLPLGAARNKAIACAQGDYIAFVDCDDLWDREKLEKQVNELERDSSVGMVFTNFIRWN MLSNKKDIFDKKAVYRKLSFEELVGNYSFCLSSFMIRREALRGLDHIFNNEFKYAEEFEL FSRIAYTWRTVYLSEPLVTYRIHKNMNTIQLRDRIGIEYQMALDNLRALAKDLDEKYPEV VKRIEFARDLSFVKDIIYRGENLKVRELMKPYLKYNIRARCFYAISFLPSSFSILITRWF YRSRI >gi|333758476|gb|AFIH01000001.1| GENE 1882 1897046 - 1898305 582 419 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRIKFKNFGILNGKDLCLYILGLFILDSIFHITGYFLGGSKLGRIGLLGLMLIISCTGII RQKICKLNRNDIAVIVLSALLSVGFLRAVISGQDINFVKPYILNGFIYLLYLPIMYYCLD SVKKCEILLQYSTIMGFVISLFAISLVISFILFPPLLSTILKFLYRMNMVLLISGLGKVA RVMLKGIVLQVLGIFGGFYFFVKGENKLFWLGVSFINFLGIAISYSRGIIGGVILALAFW IILSSKFSGIEKGKAKILNLIGFIVLLFVLLYMLCGEHGHFFSYIIERFTGTSNDGTLNS DVFRKMMNKMIHYKILEAPFWGGGLGEHINLRDGAIEMTYQDIVIRIGFVGLSFFLYPVL SMLVKLLRENSNITLRGVIFLSLIAIMFAAYFNPYLITSLGLFVYCFCIRAFSLHTNKA >gi|333758476|gb|AFIH01000001.1| GENE 1883 1898296 - 1899024 447 242 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|169351153|ref|ZP_02868091.1| ## NR: gi|169351153|ref|ZP_02868091.1| hypothetical protein CLOSPI_01932 [Clostridium spiroforme DSM 1552] hypothetical protein CLOSPI_01932 [Clostridium spiroforme DSM 1552] # 1 214 195 403 442 76 28.0 2e-12 MVLRALKECANSSAVFFTICERMRKEYKRVLGVDSEILFNRCSSLYDKKLSLCSDENDKI IFLYAGSLYYGREKALIELAKALKKINIENGEKGKGAVLHIYLNALPSDSFLHEIQELGT AKYLGKLDFKELKIKLNECNYPVFVESFEEKQMEKVQLSFSTKIPEYLSLEKTILAIGPD HIGSMDCLRNVAVCINSIEEIYAKVEHLLHYPEEFSNLGLKARQEYEKIMEIPGLEEYIV CE >gi|333758476|gb|AFIH01000001.1| GENE 1884 1899024 - 1899554 156 176 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|20560035|gb|AAM27784.1|AF498415_8 ## NR: gi|20560035|gb|AAM27784.1|AF498415_8 ORF_8 [Pseudomonas aeruginosa] # 1 163 2 176 434 72 29.0 1e-11 MKNVLIISNRVLSETDNNGKTLLNLIRKIPSKMVSQLYFYGSLPEVEGYNYFQISNKDII SGKINHKLRGRQVFPIKGEIQDNNRTLTEKYSVKRTAFKLLVRDLLWKNSWISEQLISWL DNIKPEYIFFMAGDAVYAYEICLWIKEKYQCKLFSYVTDDYILKRSQESFWEKNID >gi|333758476|gb|AFIH01000001.1| GENE 1885 1899659 - 1900888 516 409 aa, chain - ## HITS:1 COG:TM0631 KEGG:ns NR:ns ## COG: TM0631 COG0438 # Protein_GI_number: 15643396 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Thermotoga maritima # 17 378 30 401 434 112 24.0 1e-24 MRILFLTIGAVYNFNHSGVYTDLLKKFVQEGHKVYVVGALEKRNAQATELGIEQGINVLR VRVGNITKTNVFEKGLSTLTLGYLYKKAIDKYWNELSFDLILYTTPPITIASLVSELKKK YNAFTYLLLKDIFPQNAIDIGILSPTGWKGIVYRYFKHIEKQLYRISDKIGCMSKANMDF ILKNNGDIVKDKLELCPNTIDIVNDSDIHKDDAILEKYKIPKDKYLLLYGGNFGKPQNVD YIVDAIDSCSDIEGVHFILCGSGTEFSKIDLYIKNANPKHVTVIDCLLPYEEYSCLVASC DVGMLFLDYRFTIPNFPSRLLDYMNYGLPVIAATDVNTDVGKVIMEENFGWWIESKNPQE FRNLISSIFVGNQIEKELRLKSMNARSCVRNCFETSRAYNTIMQAYHNR >gi|333758476|gb|AFIH01000001.1| GENE 1886 1901091 - 1902641 383 516 aa, chain - ## HITS:1 COG:CAC2189 KEGG:ns NR:ns ## COG: CAC2189 COG0458 # Protein_GI_number: 15895458 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase large subunit (split gene in MJ) # Organism: Clostridium acetobutylicum # 4 314 1 313 315 184 34.0 4e-46 MKEIRILFTGVGRRVELVQAFRQAALCLNIPLKIFGADMTGTAPSLAYCDFSRKVCGMKD KNYIPELLRICEEDKIDLLIPTIDTDLLVLSENSSLFKDTKVMISNPDMIRICRDKNKTS QFFMDCGLKAPIPINDWKKYKGGYPAFIKPKDGSSSINAFKIKDEEDLKIHAAQIEDYIV QPYIDGTEYTIDIFCDWNGEPISIVPRIRMSVRAGEVLKTQIAPNKEMHEEMKRLCKCFK PCGPITVQLIKEIRSGDNYYIEINPRFGGGAPLSMMAGANSAIFILQLLSSETPKFEPDD LADGAVFSRFDQSVCTNIEAYNGKLKGVVFDLDDTLYSEKEYVRSGFKAVAEYLNQDDAF SQLWNYFLCGNQAIDEYLLSIGKIELKEKCLKLYREHFPTIKIYEDMYERLQNYRKQGLK IGIITDGRSEGQRNKISALHLEELVDDIIITDELGGEQFRKPCDIAFRILMTKWRIQGSE MLYIGDNMAKDFQACKQLGIRYEWINNQDGLYRKAR >gi|333758476|gb|AFIH01000001.1| GENE 1887 1902659 - 1903384 438 241 aa, chain - ## HITS:1 COG:NMB1820_1 KEGG:ns NR:ns ## COG: NMB1820_1 COG2148 # Protein_GI_number: 15677656 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sugar transferases involved in lipopolysaccharide synthesis # Organism: Neisseria meningitidis MC58 # 44 239 3 198 223 232 56.0 4e-61 MKILVRLSKLILCVSIFAAAISLILEALERKKTKRQKRQGIYERYLKRPFDCFFASFSLL LFSPLMLFLSLLVRAFLGAPVLFTQDRPGRDGKIFKLYKFRTMTDKRDKEGNLLADAERL TPFGKMLRSSSLDELPELLNIIRGEMSFIGPRPLLVKYLPLYNEVQARRHDVRPGLTGLA QSRGRNSLSWEEKFKLDVEYVNHITFLGDLKIIVDTIRSVLNSEGISADGDVTMPFFTGN E >gi|333758476|gb|AFIH01000001.1| GENE 1888 1903435 - 1904634 714 399 aa, chain - ## HITS:1 COG:Cj1121c KEGG:ns NR:ns ## COG: Cj1121c COG0399 # Protein_GI_number: 15792446 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis # Organism: Campylobacter jejuni # 1 397 18 383 386 221 34.0 2e-57 MQEAFESNWMSTVGKNINEVERIVAEEVDCQYAVALSAGTAALHLATKLAGEKLYGQAKP NEGTLKGKRVFCSDLTFDASVNPVAYEDGEAVFIDTEQDTWNMDPVALEKAFSLYPDVKL IVLAHLYGTPGHIEEIRDIARKHAALIVEDAAESFGARYKGKETGTFGDYNAISFNGNKI ITGSSGGMFLTDSKEDADKVRKWSTQSREDAPWYQHEEIGYNYRMSNVIAGVVRGQLPYL RKHIAEKKAIYERYEEGLKDLPLRMNPYDGENSEPNFWLSCILIDEEAMSPLVRGEQNFL YQSVEGKSNPQEIMEMLAKVNAESRPIWKPMHLQPIYRMNAFVTRNGNGRGQSNAYIDEG KAQDVGADIFQRGLCLPSDNKMTEEEQERIMEVIKRAFS >gi|333758476|gb|AFIH01000001.1| GENE 1889 1904850 - 1905110 150 86 aa, chain - ## HITS:1 COG:SP1740 KEGG:ns NR:ns ## COG: SP1740 COG4115 # Protein_GI_number: 15901572 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 1 84 1 84 84 99 51.0 1e-21 MLLQWDRDAWSDYLYWQSEDKRILRKVNQLLQDILRSPFEGIGKPEALKGNLTGMWSRRI DGANRVVYSVNGNIIYILACRGHYKR >gi|333758476|gb|AFIH01000001.1| GENE 1890 1905122 - 1905376 277 84 aa, chain - ## HITS:1 COG:no KEGG:CCC13826_1068 NR:ns ## KEGG: CCC13826_1068 # Name: not_defined # Def: addiction module antitoxin # Organism: C.concisus # Pathway: not_defined # 1 82 1 83 84 82 53.0 7e-15 MAQISLRVDDDVKRDAERTLEDIGLNMSTAINIFLKTVVRENRIPFALSADTFYEESNIR YLEKKYKEFKSGNLKFESHDLIEE >gi|333758476|gb|AFIH01000001.1| GENE 1891 1905496 - 1907250 1864 584 aa, chain - ## HITS:1 COG:CAP0106 KEGG:ns NR:ns ## COG: CAP0106 COG1154 # Protein_GI_number: 15004809 # Func_class: H Coenzyme transport and metabolism; I Lipid transport and metabolism # Function: Deoxyxylulose-5-phosphate synthase # Organism: Clostridium acetobutylicum # 1 580 1 582 586 592 50.0 1e-169 MVLERINGPEDLKGLTKEERDTLAREMRENLIQRASLHMGHVGPDLGFVEATIALHTVFD APNDHLIFDVSHQTYPHKMLTGRREAYMDPEHYDDVGPYTDPKESPYDLYSIGHTSTSVD LAIGMAKARDILGGKEHVIGIIGDGSLSGGMALEGLNVAGEMESPLILVLNDNDQSIAEN HGGMYKKLRELRETKGEAKDNIFRGMGLEYLYEGNGNDVESLVQIFEKAKSYKRPVLVHI FTRKGMGLPYAEEHKEEWHWHMPFYRETGKTREEWEFGEDLSDRTADFLLRKMKKDPSIL VITAGVPGGMGFTAEKRKEAGERFIDTGIAEQSGVTLACGAAKRGAKALFFTSATFLQRA YDQISHDAGINSLPITIVVNSASLYGMSDKTHLGLYLASMANSIPNLFVLAPAFKEEYFA MLDYSLEQRERPMLILAPSDVVEDELPVEKDFGKPVFRTVKAGKEVAIFAPGSLYGEGKA AVELLQEKYGISATLIEPTILSHLDKECLQNLKKEHKLVVVLEDGILDGGLGEKIARYYG MDEMKVLCLGLQKAFYDEYDVTELLKEHKMDRESIAEAVVKGLQ >gi|333758476|gb|AFIH01000001.1| GENE 1892 1907327 - 1907896 471 189 aa, chain - ## HITS:1 COG:no KEGG:Cbei_2682 NR:ns ## KEGG: Cbei_2682 # Name: not_defined # Def: hypothetical protein # Organism: C.beijerinckii # Pathway: not_defined # 8 179 2 173 185 199 59.0 7e-50 MKQNYLKNAIGHFKTITKHKLLVMRYCFSIGLYKQGLLHDLSKYSFTEFRTGILYYRGYK SPNGVERIETGTSEAWLHHKGRNKHHFEYWCDYDLENVHRMIGCRMPYRYVAEMFCDRIA ASKNYLGEEYTDDRPYLYYEKMIGTPLIHEKTREELEFLLRLLKDKGQEEAFSYLRKEIK RRRKEKEFF >gi|333758476|gb|AFIH01000001.1| GENE 1893 1907893 - 1908663 549 256 aa, chain - ## HITS:1 COG:CAC1489 KEGG:ns NR:ns ## COG: CAC1489 COG0671 # Protein_GI_number: 15894768 # Func_class: I Lipid transport and metabolism # Function: Membrane-associated phospholipid phosphatase # Organism: Clostridium acetobutylicum # 66 235 42 204 219 79 33.0 7e-15 MERFWENLYRKYRNSKWPGIVEKHPKLHRLMSLFYRYRYANVLWIGIIYPVWFASLESRV TVSTGYHIMHTYLDDRIPFCEIFIVPYFLWFIYIFAGLLYFMFVNKEDFYKVSLFLFIGM VASLIICEIYPNGTDLRPAYLSDKNIFLLMVKSLYRVDTPTNVFPSIHAYNSLCMHIALM KSKDLRRAKYGRAVRWFSGFLCIFICIATLVLKQHSVLDVGGALLLSFITYGFVYGYPSF ILGEYWEEKSRNRERV >gi|333758476|gb|AFIH01000001.1| GENE 1894 1908600 - 1908728 80 42 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFQLLFAIHNRLELGISWKVRAWKDSGKIYIGNIGTVSGPGL >gi|333758476|gb|AFIH01000001.1| GENE 1895 1909115 - 1909843 604 242 aa, chain - ## HITS:1 COG:L36841 KEGG:ns NR:ns ## COG: L36841 COG3382 # Protein_GI_number: 15674160 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Lactococcus lactis # 1 240 1 235 235 212 47.0 5e-55 MKKFIADDAFWKIFPEAAIAVLTVKNVQEAAVLDEAKTQEIKTLLEDANEGARRFLTSET ISENEVVKAWRDAYSKFPTKKGARCSLEALLKRVLKGNPVGSIAPTVDITNAISLKHAFP IGAENMDAFRGDLHLGIMQGGEDFWPIGSDKPEPPLSGEIAYYDDEGVICRCWNWRDGKR TEVNDDTTKEFIAMECVEPGRVEELKVALEELAELLSKYVGAEVINKQIVNRDNREAVLE EE >gi|333758476|gb|AFIH01000001.1| GENE 1896 1909882 - 1910523 758 213 aa, chain - ## HITS:1 COG:no KEGG:Cphy_1674 NR:ns ## KEGG: Cphy_1674 # Name: not_defined # Def: redoxin domain-containing protein # Organism: C.phytofermentans # Pathway: not_defined # 63 197 195 326 344 110 40.0 6e-23 MLFFRKWMLPAALAVLTLLSACGNSAGAGKTTEETKTEGTSAVAGEAATEKEGAKAENTA NDSQFAVSDDSLTFTAKNLDKEDIDSSIFADKDLTVLNVWGTFCGPCINEMPELAAWAKE MPENVQIVGLVADISGESDDEHIALAKKIMEQSSGEFTNIIPSVDFVPLLSNVVGVPTTY FINKDGKIVGKPIVGAQVPKYKTFVEEYLKTLE >gi|333758476|gb|AFIH01000001.1| GENE 1897 1910660 - 1911895 908 411 aa, chain - ## HITS:1 COG:aroD KEGG:ns NR:ns ## COG: aroD COG0710 # Protein_GI_number: 16129649 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate dehydratase # Organism: Escherichia coli K12 # 35 234 39 245 252 115 35.0 1e-25 MGMIVPIQGKTEEECLETLQALKENPYFPHIYAVELRYDLLERHVEPLSDFLRKSREIIG KKKLIFTIRTNRQGGAFPFGKSYFQANILAMESRVPDYIDLEVETGEEGRGSWKECIAMV QGLGGKVIASYHDFEKTPGLRECEEILNQLSSYSTDIVKIALMPRSKEDVLNLMLAGRRW KDRNPKRELISMSMGELGKASRVLHDLSGSSHSFVQVFSASAPGQWGIEDYMEVSKKLSG KKGLALLGFMGSGKSTLAPKIAERCGWQAYEMDQLLEEKFAMRIEEFFRKFGEERFRREE AKLLRSLSGKEHVLSPGGGVVLREENRKVLKEHFFSIYIKVSPETVLKRLAEGKNVRPLL QGKMNVNEIGEMMRKRSAYYEEVADYILEGDGKSVSACVEEIYSVLLENGL >gi|333758476|gb|AFIH01000001.1| GENE 1898 1911985 - 1912533 334 182 aa, chain - ## HITS:1 COG:BS_yqeG KEGG:ns NR:ns ## COG: BS_yqeG COG2179 # Protein_GI_number: 16079622 # Func_class: R General function prediction only # Function: Predicted hydrolase of the HAD superfamily # Organism: Bacillus subtilis # 12 178 3 170 172 114 39.0 7e-26 MKKAVKRREERKNAFFPTYSVRSVYTLDFERLYEEGYRALFFDIDNTLVYHDEPALPETV ELFGRLKKIGFKTAILSNNGKERVKRFAEAIGADYYQEKAGKPDVKAYLNAVREFSLQKE SCLFFGDQIFTDILGGNKAGVPTVLVYPMGKEKYFHIVLKRMLEKPFLYFYSRKHALWRN EP >gi|333758476|gb|AFIH01000001.1| GENE 1899 1912530 - 1913006 443 158 aa, chain - ## HITS:1 COG:CAC1698 KEGG:ns NR:ns ## COG: CAC1698 COG1327 # Protein_GI_number: 15894975 # Func_class: K Transcription # Function: Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains # Organism: Clostridium acetobutylicum # 1 151 1 151 151 162 53.0 2e-40 MKCPFCNAEDTRVIDSRPADENTAIRRRRQCEICGKRFTTFEKTETLPFMVVKKDQSRVP YDRAKLEGGILRSCHKRPISPQQISELVDDIENNIFKHDSKEVSTEEIGEMVMERLRNLD QVAYVRFASVYREFKDINTFMEEIGKLLTSRSKGDEKL >gi|333758476|gb|AFIH01000001.1| GENE 1900 1913003 - 1914277 180 424 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|118576132|ref|YP_875875.1| ribosomal protein L31E [Cenarchaeum symbiosum A] # 277 400 81 201 217 73 34 3e-11 MMKNKDLRRFARERWRKFWPTVLAAFVLLFSVYIALAMGFSFVLSPFLLTSFLPGIEELR RGISLSISGILLALLVFVLVMYLIITSFSILYMALKSIRGQKLSPFDIFYTLRPENYPMQ LRVLAYSLLYTAIPWLFSLLTFFLFGSSANNSILSMAEEVFFNVLIGVFLMFFLCTPFLL LESKSIGLIDAMKKSAEWMKPERARFFRHVLYFLGLRLIANVLAEMWGYILENSILPGFF LMFFFLLFLSPYYILVQAAFYQDILSKKKMEQERREVQPEAQEEREEEPGLIAEEERKAG VPESEAVPKPEAELKSEADVEPQADVERQADVEPQAAAESETKEDPGLAVEAEPEEEPKA AIEAEDKAVPGEVSDEEPKATAEKELREDPKKEAKEKPEEEPKEELSFEEARKRYTDYKE EEES >gi|333758476|gb|AFIH01000001.1| GENE 1901 1914403 - 1915314 1184 303 aa, chain - ## HITS:1 COG:HP1564 KEGG:ns NR:ns ## COG: HP1564 COG1464 # Protein_GI_number: 15646171 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Helicobacter pylori 26695 # 62 301 36 269 271 216 47.0 3e-56 MRKRIAALLLGLAVVSLAACGGQKADTKTETKKETEAGSEKATEKAAESEKATEAAAASG ETVKIKIGATPSPHAEILEAAKDALKKKGVEIEIVTYNDYVQPNIATDEGQIDANYFQHQ PYLDDFNKENNTHVVSVGKIHYEPFGIYAGKSKDLKNIQDGAKIAVPNDTTNEARALLLL EANGIIKLKDGAGLTATKQDIVENPHNVEIYEVEAAQIPRSLDSVDFACMNGNFAIQANY KPSEALAAEKSDSEAAQTYANIIAVAEKNKDAAWAKTLVEVLTSKEIQDFINKKYEGGVV PLS >gi|333758476|gb|AFIH01000001.1| GENE 1902 1915431 - 1916096 790 221 aa, chain - ## HITS:1 COG:FN0659 KEGG:ns NR:ns ## COG: FN0659 COG2011 # Protein_GI_number: 19703994 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, permease component # Organism: Fusobacterium nucleatum # 6 205 18 217 233 165 47.0 8e-41 MSIKELIPMFQTETLATLYMVGVSTLISYLIGIPLGVILIVTEDGGLYPIKPVHAVLGFL TNIFRTIPFLILLVMVLPITKFLVHTTLGPNAIIPPLVFAAAPYIARMVESSLKEVDAGV IEAARSMGANRLQIIWKVYLPEAKPSLYIGAAICITSILSYSAMAGFVGGGGLGAIALNY GYYRYKTDIMIIAVLVLIIIVQIIQEFWMRLAKYSDKRRRV >gi|333758476|gb|AFIH01000001.1| GENE 1903 1916097 - 1917137 1152 346 aa, chain - ## HITS:1 COG:BH3481 KEGG:ns NR:ns ## COG: BH3481 COG1135 # Protein_GI_number: 15616043 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, ATPase component # Organism: Bacillus halodurans # 5 344 1 335 338 283 45.0 3e-76 MEENIISIRGLGKVFRTVSGDFTALDDIHLDIKKGQIHGIIGLSGAGKSTLVRCINFLER PSSGQILFKGKSLSTMKEKEILAMRQNMGMIFQQFNLLEQRNLLENVCFPLEIAEKGSFF QKIVQGSARKKKRIARAEELLKLVGLEGREKSYPSQLSGGQKQRVAIARALATNPEVLLC DEATSALDPKTTEQILELLKQINEEMGVTIIIITHQMSVIESICDEVAIIDHSKIAEHGP VKEIFRSPKTEIGKRLILGEGEREAFFGSGKRFRIVFDGKNAHDPILSELILALHTPVNI LFANTKEVDGMAVGQMVIELPENLEDILHVTEFMKERGIPFEEVHA >gi|333758476|gb|AFIH01000001.1| GENE 1904 1917260 - 1918642 1331 460 aa, chain - ## HITS:1 COG:lin1661 KEGG:ns NR:ns ## COG: lin1661 COG0624 # Protein_GI_number: 16800729 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Listeria innocua # 7 458 5 468 470 259 36.0 6e-69 MEKTIKNWLLAHEEEFIQDLFTLVRINSVRGETKEGLPFGEGPKEALDAGLKICERYGFH TKNWDNYVGTSDFSPELPHNLDILGHLDVVPAGEGWEVTGPFEPLVKDGILYGRGVSDDK GPVLAALYAMRAVKELGYSLKKGVRLIMGTNEETGSADLEYYYKREKAGEMSFTPDAEFP IINIEKGAMHGTLRKNRTVEGSLLSMKAGVAVNAVPQKAVLEFKTLSDEEFNAAKLAVEK ECSVQIQKSGNTVTVIGVGAHASTPHLGKNAGLAALSFAVKLPSLGAEDRKAFESVLELF TYGVTDGSGIGTKLQDEESGELTCTLDIFEVGEKEMHFIYDSRIPICGTKENCEDMARKT VEAKGFIFETEGMVPPHHVPKDSDFIKALLSCYEKVTGEKGECLAIGGGTYVHHVENGVA FGAILPGVDTHMHGADEWIKVKDLLLAAEIYAESILALCC >gi|333758476|gb|AFIH01000001.1| GENE 1905 1918689 - 1920281 1635 530 aa, chain - ## HITS:1 COG:CAC0630 KEGG:ns NR:ns ## COG: CAC0630 COG4108 # Protein_GI_number: 15893918 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptide chain release factor RF-3 # Organism: Clostridium acetobutylicum # 1 529 1 526 526 712 65.0 0 MANLREEIEKRRTFAIISHPDAGKTTLTEKFLLYGGAINLAGTVKGRKSAKHAVSDWMEI EKERGISVTSSVLQFNYDGRCINILDTPGHQDFSEDTYRTLMAADSAVMVIDGAKGVEPQ TIKLFKVCVMRHIPIFTFINKFDREARDPYELLDEIEEVLGIRTCPINWPIGCGHNFKGV FDREKEEVDLFHAAGGGKKEVEKEVYSKDDPKLEGVIGKEYFDKLQDDLELLEGAAEGFD EEKVDAGLLTPVFFGSALTNFGVETFLQHFLKMTKSPLPRMSDQGLIDPVEEAFSAFVFK IQANMDPKHRDRVAFMRICSGEFDAGMEVNHIQGNRKVKLSQPTQMMADERKIVEKAYAG DIIGIFDPGIFSIGDTLELSGKKFVYEGIPTFAPEHFARVRQIDTMKRKQFLKGVSQIAQ EGAIQIFQEYNTGMEEIIVGVVGSLQFEVLTYRLKNEYNVEVRLDMLPYEHIRWIENYTE IAVNEISGTSDMKLVKDLKDRPLLLFAHPWSIGMVLDRNKDLHLTEFSKN >gi|333758476|gb|AFIH01000001.1| GENE 1906 1920508 - 1921728 1255 406 aa, chain - ## HITS:1 COG:CAC1693 KEGG:ns NR:ns ## COG: CAC1693 COG0206 # Protein_GI_number: 15894970 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division GTPase # Organism: Clostridium acetobutylicum # 13 317 12 318 373 325 63.0 1e-88 MIEIQLPESEAAAKIIVVGVGGAGNNAVNRMVDEGIVGVEFIGVNTDKQALQSSKAASSM PIGEKLTKGLGCGGKPEIGTKAAEESAEEITAALQGADMVFVTCGMGGGTGTGAAPVIAK IAKDMGILTVGVVTKPFRFEAKQRMKNALSGIDALKEVVDTLIVIPNDRLLEIVEKKTSL PDALKKADEVLQQSVQGITDLINVPGLINLDFADVSAVMKDKGVAHVGIGRAKGDDKAIE AVKTAISSPLLESTIEGATDVIINISGDISLIEANDAASYVEELVGENANIIFGAMYNED AQDEVSITVIATGIKEKKSAETAKAAPEFKPQAGLHSNVSPVQPGFTTPSFLNNPRLSTP TLGERPEVPMENPSLRTTETVEPQVQSKPRIGREAGLEIPDFLRRK >gi|333758476|gb|AFIH01000001.1| GENE 1907 1921854 - 1922597 693 247 aa, chain - ## HITS:1 COG:no KEGG:Closa_2458 NR:ns ## KEGG: Closa_2458 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 247 1 242 242 202 41.0 7e-51 MRDRKESRERKKKKELSLYGILLLFLLLIMLFLSTRVHEINVIGNEQYTKEELVNMILPK DLDYNSLYAFVEDRIKPHKSLPFIEKYELHWKSPFSLEIIVYEKNMVGYVEYMSSNLYFD GDGVVVESTQKKLPGIPKITGLSFSKVSLYKALPVENKAIFQDILNLSSALRQEKIECDH IDYSASSTATLYIGEIKVLLGDHEDMEQKLMSLKDILPALAGRKGTLDLSKYRGRKEKEA YVFKEEK >gi|333758476|gb|AFIH01000001.1| GENE 1908 1922600 - 1923742 1232 380 aa, chain - ## HITS:1 COG:BS_spoVE KEGG:ns NR:ns ## COG: BS_spoVE COG0772 # Protein_GI_number: 16078585 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Bacillus subtilis # 29 369 26 361 366 177 37.0 2e-44 MAKKMKVKHFYDFSLVVMVFSITLFGLLMLYSASGYMAAKSDLGDMYYLTRQGSFAIAGF LLMLLISRFFDYHWFSKLNLILYVLAWGALLATFVMGVASHGSHRWIRLFGMQFQPSEVM KPAVIIVLATLLTDKGYRINSLRDIFRTLLYALIPAAVVAFTNLSTGMIIVGIAVFMLFV AVKTYRYHAALFLLGLLAYLGAYPLAIFLQKVKILHDYQITRILAWKDPVSFPDDTYQTR QGLYAIASGGLFGKGLGESIQKFLMPEAQNDMIFTIICEELGLVGAVGLMLVYALILFRL YEIAKNARDLFGSFLVIGVMAHIALQAILNIAVATNSIPNTGITLPFISYGGTSLVILLA EIGICLNVSWQTTLDREKGE >gi|333758476|gb|AFIH01000001.1| GENE 1909 1923773 - 1925137 1558 454 aa, chain - ## HITS:1 COG:BH2567 KEGG:ns NR:ns ## COG: BH2567 COG0771 # Protein_GI_number: 15615130 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramoylalanine-D-glutamate ligase # Organism: Bacillus halodurans # 2 454 8 448 450 258 36.0 1e-68 MNRQKVLVLGTGRSGVAAAKQILAMGGEVVFFDANAKLDEKKLLAQFKKKEVLKIVKVIK GKLLESDLLKIDAAVISPGIPIDEPYVLLLNTAKIPVIGEIELAYQSCKGKLCAVTGTNG KTTTVSLIGEILKSQYPDTHVVGNIGNPFTAEALDTEEQSVTVCEVSSFQLESIVDFRPN VSAITNITPDHLDRHKTMKNYIAIKESIAVNQTEEDSIVLNYMDSELRKFGKKRGLKPNV LWFSSEEEPKEGFFLRGEEFIYKNKEKEEKLFKTGDLQLLGKHNYENVMCAMGVALKMGV PMDKIVKVCKKFKPVEHRIEFVRERSGVRYYNDSKGTNVDAAIQALRAMPGPVLLIGGGY DKHVDFDAWVKEFKGRVKYLVLIGETRNQIAACAKKNGFHNLMFAEDMDEAVKDCAAYAD PGDYVLLSPACASWGMFKDYEERGRIFKDCVKNL >gi|333758476|gb|AFIH01000001.1| GENE 1910 1925268 - 1926233 873 321 aa, chain - ## HITS:1 COG:CAC2127 KEGG:ns NR:ns ## COG: CAC2127 COG0472 # Protein_GI_number: 15895396 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase # Organism: Clostridium acetobutylicum # 10 317 10 314 317 213 44.0 5e-55 MLSNTIALGIAFCVMLLISPKGIAILHQLKFGQEVRDDGPQAHLKKQGTPTMGGILFLIA ISAAILPFIKEKGVLPAYLLGLGFGIVGFIDDYLKVVKHQSEGFNPKQKMAAQIIISLLY IAYLFFYSGHTTAFLFPFLKDTEVTFGILFFPISLFIITATDTGANFTDGIDGLCSSVTA VIVFFLFMADRVLLGNAQLGALPGAVLGGLLGFLCFNAYPAKVFMGDTGSLALGGFVVAM AIQTETALYIPFFAVIYFMEVLSVILQVGYFKITHGKRIFKMAPIHHHFELLGWSETRVV TIFTTITILACFFVAFVLEIT >gi|333758476|gb|AFIH01000001.1| GENE 1911 1926249 - 1928348 2030 699 aa, chain - ## HITS:1 COG:CAC2130 KEGG:ns NR:ns ## COG: CAC2130 COG0768 # Protein_GI_number: 15895399 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Clostridium acetobutylicum # 26 633 59 605 729 254 33.0 4e-67 MIRKNSEEYSRIVLGQRQSGYGSRSIQARRGDILDRNGTILATSEKVYNLIMDPRAITSR TDDRYLKASLDALKEYFKEDERVAVAESVLNEQRNLAGNKKSAYFKFKEGMSFEEKEAFQ KFIDEKNAVYRKSGNKYEIKGLWFEDKYQRSYPYKDLACNVIGFSSADNEGGTGGVEQYY NNSLIGVNGREYGYLDSDTKLQSVIREATDGNSIVTTINFNIQRTVEKYLQEWQKDDVGS KMAAAIVMNPKNGEILAMASTNRFDLNHPRDLDKTLYPDSLLLEMGKKEALAKYKREHNN QELSEDKLSTVYSNDEVMSLGSQVAWNQMWRNVAISDTYEPGSTVKPFTLAGALEENAIQ QNTMFTCEGFITLSDGVKTWTIRCHKRDGHGTIDAEQAIMQSCNVYMMDTAFQEGAENFV KYQHVFGFGEKTGIDLPGEADTSALVYKADNLGKTSLATNSFGQNFNVSMVQMAAAFSSV VNGGSYFRPHVVKQILNANGTVIQEMEPELLRVTCSKATSDFLKEALYQTVEKGTGRPAQ IQGYHVGGKTGTAQKLPRSEKNYLVSFCGFAPVEDPQLLVYVIVDTPNLDGEEQSSASFA TKIEQKIMNDALQFLNIPPQGETDPEASLNKDLQEGIKAKEETGETTSETKKENSEAKEE SSLDSDEKQDNEDSVPGALPESSAVNSASAEKENTDNEN >gi|333758476|gb|AFIH01000001.1| GENE 1912 1928472 - 1929035 336 187 aa, chain - ## HITS:1 COG:no KEGG:Closa_2465 NR:ns ## KEGG: Closa_2465 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 101 187 74 160 160 92 51.0 8e-18 MARKLIRRQAGYIAGSVVTKEEIAPRKKNVQKVKRKMAPKKNTARKPVHKGGAVSREERA RILREREMGHVLQQERLQGKTSANFALVASVALFMLVMGGLCFHYIQLQTEVNTRIHRIE QKKKQIEVLKQKNDALQNAINASLDPEKIYTMATEELGMVYPGENQVIEYKKQESEYVRQ YENIPKH >gi|333758476|gb|AFIH01000001.1| GENE 1913 1929251 - 1930189 549 312 aa, chain - ## HITS:1 COG:CAC2132 KEGG:ns NR:ns ## COG: CAC2132 COG0275 # Protein_GI_number: 15895401 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis # Organism: Clostridium acetobutylicum # 1 310 1 309 312 363 59.0 1e-100 MEFQHKSILLNECMEGLSIKADGIYVDGTLGGGGHSFHIAQRLSDKGRLIGIDQDEDAIE AATKRLAQFKQRVTIVRDNYEHFQEILSTLSIPAVDGILLDLGVSSYQFDEADRGFSYRF DAPLDMRMDKRQDFTAKDLINSYSEAELYHIIRDYGEDKFAKNIAKHIVLERAKKPIETT FELSEVISHAIPMKMRVQGGHPAKKTFQAIRIALNRELEVLEESLDGMIKALKPGGRLCI ITFHSLEDRIVKRAFRTAEDPCICPKDFPICTCGRKSLGKVISKKAILPSDLEREENPRS KSAKLRIFERGE >gi|333758476|gb|AFIH01000001.1| GENE 1914 1930189 - 1930614 376 141 aa, chain - ## HITS:1 COG:CAC2133 KEGG:ns NR:ns ## COG: CAC2133 COG2001 # Protein_GI_number: 15895402 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 1 141 1 142 142 145 49.0 3e-35 MFTGEYHHNLDTKGRMMIPAKFREDGYNEFTLTRSLDGCLSLYAIPEWKELEEKLQALPM TNKQARTLKRFLLGSAISCECDKQGRILIPQTLREKAALEKDVVLLGVGDHAEIWAESLW SENNDFSDYEQLATDMEGLGI >gi|333758476|gb|AFIH01000001.1| GENE 1915 1930905 - 1931999 1333 364 aa, chain - ## HITS:1 COG:CAC2134 KEGG:ns NR:ns ## COG: CAC2134 COG0012 # Protein_GI_number: 15895403 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted GTPase, probable translation factor # Organism: Clostridium acetobutylicum # 1 364 1 365 365 438 63.0 1e-123 MKLGIVGLPNVGKSTLFNAITKAGAESANYPFCTIDPNVGVVAVPDERLQLLSDLYHSEK ITPAVIEFVDIAGLVKGASKGEGLGNQFLGNIRETDAIVHVVRCFDDDNVIHVDGSVDPI RDIETIELELIFSDLEVLDRRMAKTKKLANNDKDAKKEYALLEKLHAHLEEGKLAINFEA EEEDAAFLDSLGLLTRKPVIYACNVGEESLADDGASNQYVQKVREYAKKNHSESFVISAQ IEQEISELSDEEKGEYLESLGLSESGLDKIVRASYSLLGLMSYLTAGEKETRAWTIKKGT KAPQAAGKIHTDFERGFIKAEVVNYKDLLDNGSLSAAREKGLVRMEGKEYVMQDGDVVLF RFNV >gi|333758476|gb|AFIH01000001.1| GENE 1916 1932023 - 1932130 85 35 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MESAISKNGKSIERSPLEWYNTSNPFDENKSSVSL >gi|333758476|gb|AFIH01000001.1| GENE 1917 1932180 - 1932611 197 143 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|291165687|gb|EFE27735.1| ## NR: gi|291165687|gb|EFE27735.1| YihY family protein [Filifactor alocis ATCC 35896] # 2 143 35 176 182 223 82.0 2e-57 MVVLSFIVIWILKYLTRYHTDFSDKMITAIVLIVAPLLVWFIGYYLFINGVKLEIYENEV VQYYTYGSRGRSVLHFKFKLEDIEQIKMKNRPFHCLKMTIKIRNPVFYGLQEKKLNKLEK VSIILDRKKSDCFMQEIEQFHRK >gi|333758476|gb|AFIH01000001.1| GENE 1918 1932637 - 1932777 70 46 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIKYWTDDAWEEFEYWTEQDTKDRGKYEIRIFTRGTKTCLDLSSQV >gi|333758476|gb|AFIH01000001.1| GENE 1919 1932770 - 1933027 323 85 aa, chain - ## HITS:1 COG:no KEGG:Selsp_0795 NR:ns ## KEGG: Selsp_0795 # Name: not_defined # Def: addiction module antitoxin, RelB/DinJ family # Organism: S.sputigena # Pathway: not_defined # 1 77 1 77 90 102 68.0 5e-21 MAQTMVNFRMDEKLKEKMEKTCKDMGLSVTAAYTMFATKVTREQRIPFEVTADPFFSEEN MDRLRRNMTQMEKTGGTTHEVNLDD >gi|333758476|gb|AFIH01000001.1| GENE 1920 1933259 - 1934110 640 283 aa, chain - ## HITS:1 COG:CAC0781 KEGG:ns NR:ns ## COG: CAC0781 COG4296 # Protein_GI_number: 15894068 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 70 283 70 276 276 73 32.0 5e-13 MNLLEYMRHRNKMTLSEWEDSFEKKEKEIIVLRHEGGGGSLRNGFWEWDEYFLAYVDCET GELHKEEGRIEFPVMDKEEPPFQFEEETIYKLRVREKLPEEVPEGALPSKNHFLVVEILE RNAVCPELEEMLIEYRKPVVLQDDVLGELTYDKLLKSFEGNIAWLCGKIHISLYVDKDNK AGITKAKKVLKTMVLEQEKWDADLRSFAAKELTKLACEWAESDEEAALITEESFAKKISL RLLWVTAGGSFTAYLDDDELFFGHSIAVSGSPKKGLLSADIEG >gi|333758476|gb|AFIH01000001.1| GENE 1921 1934132 - 1934479 368 115 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0724 NR:ns ## KEGG: Vpar_0724 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 3 115 7 119 119 106 46.0 3e-22 MEFDESLQQYVYQYEDLIFSWDEEPKEHYLNKVKALAKNYKDNLDRIIAFILPDLREMYG DVSKEDVKNNLGKPIIDYNQGTVTYCDQSFDDCHIFAFEFSNNAFDKLEHFSVDG >gi|333758476|gb|AFIH01000001.1| GENE 1922 1934543 - 1935160 641 205 aa, chain - ## HITS:1 COG:CAC3341 KEGG:ns NR:ns ## COG: CAC3341 COG0655 # Protein_GI_number: 15896584 # Func_class: R General function prediction only # Function: Multimeric flavodoxin WrbA # Organism: Clostridium acetobutylicum # 1 205 1 208 208 227 55.0 1e-59 MKVLMINGSPRTQGNTSIALAEMVKVFEQENIEVEVVQIGNKDIRGCISCGYCYDKGKCV FNDVVNELAEKFEAADALVLASPVYYASANATLIACLDRLFYSTHFDKTMKVGASVVVAR RGGLSATFDELNKYFTICGMPVASSQYWNSVHGCEKGEAKEDLEGLQTMRTLARNMAFLM KSIALGKEKYGLPEQEEGIATNFVR >gi|333758476|gb|AFIH01000001.1| GENE 1923 1935706 - 1936203 190 165 aa, chain - ## HITS:1 COG:SP1250 KEGG:ns NR:ns ## COG: SP1250 COG4268 # Protein_GI_number: 15901111 # Func_class: V Defense mechanisms # Function: McrBC 5-methylcytosine restriction system component # Organism: Streptococcus pneumoniae TIGR4 # 1 165 279 435 442 91 33.0 5e-19 MGYGKRKVYGILFDGAWLWEEYVNSLVEGYFYHPMNKAGKDKQWLFAGNNGLIYPDFIGK DDENRVIADAKYKPMGNIGNQDYLQVLAYMFRFDAKRAFYFYPEASGQNDKELWLNKGSS FEGNVSARDDVCLIKHGLRIPRDARDYQDFEQQIGMSEISFLKIL >gi|333758476|gb|AFIH01000001.1| GENE 1924 1936299 - 1937009 279 236 aa, chain - ## HITS:1 COG:SP1250 KEGG:ns NR:ns ## COG: SP1250 COG4268 # Protein_GI_number: 15901111 # Func_class: V Defense mechanisms # Function: McrBC 5-methylcytosine restriction system component # Organism: Streptococcus pneumoniae TIGR4 # 3 236 4 244 442 173 40.0 3e-43 MNLFKIKDNQLKLKTDFADVKAITDIIADKTFEQLEKDGIFVFPEVIKDADDISRNQMVL QSYNDKYVSGNIMGFLGAGDQRLVIESRFSTGEDYLFQYLLNKVMDFPNIVDLEVDANQD NALFNLLVFLFPHYLRKAARKGAFKTYIRRWYNDGNARGTIDVARHIRMNTPFVGNMAYS QREYSYDNYLMELVRHVIEYIKTKPYGRRLLNSAKDEVKLVIDSTTDYTPGERKRL >gi|333758476|gb|AFIH01000001.1| GENE 1925 1936990 - 1938984 897 664 aa, chain - ## HITS:1 COG:SP1251 KEGG:ns NR:ns ## COG: SP1251 COG1401 # Protein_GI_number: 15901112 # Func_class: V Defense mechanisms # Function: GTPase subunit of restriction endonuclease # Organism: Streptococcus pneumoniae TIGR4 # 227 648 232 617 643 295 45.0 2e-79 MVADGKKYPPKYVIAVANHIANGKEISTQEYNAVEAKSYLESRGCTIKMKQEKYEITITA DSVVSTDDRFTMDYLEAGDNYKPIDAYFMKNGEEIIRRNRNKGELKISNQTLPRIACQIF EKQLVSLSDEDKKSFPICQYGPGRDVIRGIFATEAEFKKYRNTMEFSIYKRENGPQFVIY SWNVFSTLVFVRECLKRFGEPGDKFILIYRDKTDQELNQNKTEQVVDEDVTKTTKESNNP YSKLLLESKNIIFRGAPGTGKSYLSKSIAADIISNGYTDRYSDLTDEQRQQVEFVQFHPS YDYSDFVEGLRPKMNDDGSMGFELQDGIFKKFVDRARKNFEDSQKSMELREQEVSAKAVM ENFFANIAFGEDKFKTIKGSEFTITNVNEKYIYISIPGNDSVNKLSLNIDEVQKMLESGT SFEKVSDVTNFFGKQFATQGYSYDFALYKAIKETDNSFTKASIEPEELKKYIFIIDEINR GEISKILGELFFSIDPSYRGKEGMVATQYSSMHTNPDEKFYIPENVYIIGTMNDIDRSVD TFDFAMRRRFRFIEVKAEDTQEMLESLENEELKNEAVKRMDDLNAAILNVEDLNENYQIG ASYFLKLKHLGNEPFDVLWTDYLKPLLQDYVRGLYDESAIMKKFAKAYGYEELDKGKVDE SVQN >gi|333758476|gb|AFIH01000001.1| GENE 1926 1939300 - 1940463 1245 387 aa, chain - ## HITS:1 COG:CAC3299 KEGG:ns NR:ns ## COG: CAC3299 COG1979 # Protein_GI_number: 15896543 # Func_class: C Energy production and conversion # Function: Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family # Organism: Clostridium acetobutylicum # 1 386 1 388 389 363 46.0 1e-100 MQNFNYCTPTRLIFGKDVIEELPEVMKQFGKRILLSYGSGSIKKIGLYDKVKELLKDYEI YELPDIQPNPKYDPSVLDGVKICKEKNIDVILSVGGGSVLDCTKAIAAGAKYEGDPWDLI TYKVKAKEALPIVDIITLAATGSEYDAGGVISRTETNDKTGYSDPLLYPAVSFLDPVYTF SVSKKQTAAGCADAMNHIFEQYFCEDSTLLNDGFMESALKSLMINTKKCLENPEDYTARA EMMLCCTYGCNGIYSLGNSESGWPCHGMEHALSAYYDITHGEGLAIITPRWMKHILNEKT VDRFVKYGINVFGIDASLDKFEIANKAIDETYHFFESINIPMHLRDVGIDEKRIDEMAKH VAENEGLEEAWAPLLEKDIAEIFRASL >gi|333758476|gb|AFIH01000001.1| GENE 1927 1941019 - 1942356 1246 445 aa, chain - ## HITS:1 COG:no KEGG:Closa_3778 NR:ns ## KEGG: Closa_3778 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 102 444 142 521 557 166 32.0 2e-39 MKKKWLTAVVVAGMALTMSLTAFAGSWKKDAIGWWYDNENGTYLQNGWSWVDGNRDGVAE CYYFENSGYILTGTTTPDGYQVNGDGAWTENGVVQTKQVAAAVNESVFSKSGSKKGLATR DTLFNNTSVSDLGVKHIIYNFTNFEQNFMDNFRNTKAHGVSVTAIMLNTPRNNPEPQSLP AGITGQEANYYGFNVTSQAGIDATTRLANRFASLYRDSIDNWVIGNEINYPNAWNYTPHS SIENYADQYAHAFRIWYTAIKQNNPSANVYIPFDYVWTEQSPSGGYYKAKDLLRLLNDRL RDLDYGIAWHPYPQGLADPNFEDDSKATNSENSLIINMKNINVLTDYLQKPEYLAPNGKV RHLILSEQGFNATNEDVQADQIAKAYNIAKNNPYIEAFFLAREYDQPGEMHNVGGALQEM HFGIREAYERGGRPRKAYSVYKSLQ >gi|333758476|gb|AFIH01000001.1| GENE 1928 1942826 - 1943587 592 253 aa, chain + ## HITS:1 COG:CAC0736 KEGG:ns NR:ns ## COG: CAC0736 COG3868 # Protein_GI_number: 15894023 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 23 241 48 268 276 154 37.0 1e-37 MSSDTGEEGLTSDDKETDQLLFLAKYKTVILSPGSFTKKDLQYLHRASTKAYAYINVGAL EEYDPEYLRFKKLALAPYENWEDESWVDVSDKEWQNYITEKIAKEIAELGFDGFFLDNFD VYYLFPEEKIYRGLDAVLSGLQKYNMPIILNGGDSYVSRAIEENATDLLFQGVNQEDVFT AYHFDTNSSSLQDSDTRRYYQDYLEKAKNAGLSVFILEYKADKELSKEVSSYCKEKHFQW YNAPDIFLTEGKA >gi|333758476|gb|AFIH01000001.1| GENE 1929 1943859 - 1945838 1998 659 aa, chain - ## HITS:1 COG:no KEGG:Cthe_2357 NR:ns ## KEGG: Cthe_2357 # Name: not_defined # Def: hypothetical protein # Organism: C.thermocellum # Pathway: not_defined # 235 633 2 389 390 126 27.0 3e-27 MGVEEKNENEVVNTTPNEVGGADSTASAQEDTQVGQETSAQEGVQAGPATSVQEETQPEP VFRVEPPLRNTEEKASESAQEQSAAEAVQAVAGELEHTTEQAVPVVKETAEKAEEAITQK VEQAVPVVKETAEKAEEAITQKVEQAVPIVKETAEKAEEAVSQKVEQAAPVVQQTATEVK QAVQQAAVQAEQKVETVVEKAEEKISAADRIKENVNKYKPAKKQKTAIENGGDGKKSHSA VIIVIVILFMLLVLGLGYAFFQRRVKVDLDKYVSVEFSGYEGYGEAEVKFDEEAFLKDYK KKIKIKKKKSGLTDEILDDYTAEEFLYDYYISGAWELDGENGKYKNDDKVHLTWNLDKDN IEELFKVKIQDSAKEFTVKDLEKVESFDAFENLKMEFTGTAPDGLAEWEASGIMDGSKGF YFSVEPQDGLSNGDKVTVKVEPEEYLDKIIQKTGKAPKETEKVYTVEGLLSYIQSGAQVD DTLLNSMKKEVEDLITSDIAREGETVELVSAEYQGYYFLTAKDSFTYKHNVFYPVYKVNI RINLPENNFVQDYSYYVTGGFENIMDEGNGKVSVDVNDMNTIYNSFVIDTGVGTWFTTKY YLDGFETLDSLRTAVVSKNLSNYKAEEKILSNESATETEAPTETSTAEESTEAETTTNS >gi|333758476|gb|AFIH01000001.1| GENE 1930 1946002 - 1947459 1385 485 aa, chain - ## HITS:1 COG:FN2069 KEGG:ns NR:ns ## COG: FN2069 COG1115 # Protein_GI_number: 19705359 # Func_class: E Amino acid transport and metabolism # Function: Na+/alanine symporter # Organism: Fusobacterium nucleatum # 5 481 1 451 451 317 36.0 2e-86 MHSVLNGIIFVIEFMTGFLWGDLLKIPLPGGSTLGLSPMVLLLIPAGIYYTLRTKFLPIR MFREMIAVLIEKPDAKMQGDLSKGKLSGIQTLIVSTATRVGMGNLVGVVAAISGGGAGAV FWMWITALIGSSTAFVEATLAQLHKRKDPLYGGFRGGPAYYIHDFFFHNKPGEKLEEGIP KKRSIVAALFALSGLICWAGISQVIGNSVSSAFENAFSVKPLISSILLVLIAAVIVLRKN ATARVLDVIVPVMAGLYFAMTVFVILTHLPALPHVFERIFSEAFGLRQIVSGGFAAVLMN GVKRGLFSNEAGSGSAPCAAAAADTDHPVKMGLFQAIGVFIDTIILCSCTAFIMLLTPEG MIKDLQGMDILQMAMNYHFGAFGKIFIAVILWLFSFSTFLGILFYARSNVSYLFGDNWTS QTAYKIFALVMLFVGGLAQYTVVWDLGDVGIGLMTIFNLLVMYPLSKEALSSLKEFEEKR KKLNG >gi|333758476|gb|AFIH01000001.1| GENE 1931 1947705 - 1948091 370 128 aa, chain - ## HITS:1 COG:MA1602 KEGG:ns NR:ns ## COG: MA1602 COG0494 # Protein_GI_number: 20090460 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Methanosarcina acetivorans str.C2A # 1 124 1 129 132 97 43.0 4e-21 MKNIEVVAAIFRKANTIFATEKGYGEFKGYWEFPGGKVEPGESLEEALRREIREELQVEI NIEEKCTVLDYDYPKFHLTMHCYFCSVLSGEIKLVEATDARWLKKEELNTVKWLPADISL IEELKKQL >gi|333758476|gb|AFIH01000001.1| GENE 1932 1948409 - 1948645 306 78 aa, chain + ## HITS:1 COG:no KEGG:Closa_2213 NR:ns ## KEGG: Closa_2213 # Name: not_defined # Def: preprotein translocase, SecG subunit # Organism: C.saccharolyticum # Pathway: Protein export [PATH:csh03060]; Bacterial secretion system [PATH:csh03070] # 17 76 15 74 77 80 70.0 2e-14 MRIAKIALVLLFVILGVALSAIILMQEGKSDGLGALSGSTDTYWQKNRGRSVEGSLEKFT KYGTVAFFAVALLLDIIW >gi|333758476|gb|AFIH01000001.1| GENE 1933 1948797 - 1951166 1389 789 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15894003|ref|NP_347352.1| fused ribonuclease/ribosomal protein S1 [Clostridium acetobutylicum ATCC 824] # 7 780 1 699 730 539 40 1e-151 MREEQKIKLKKIILDIEKDSSLPKMKEKELIHFLGIPKEEKKDFTALLEEMVEEGLLSFS AKEGRHSSLTAKPEEKGHSKASMQKERTLKGIYSKAKKGFGFVSLSEKELDDIYIPKGSE GNAMDGDTVQILITKERQGDSSAEGKIVKVMKRAVTEVLGLVKERREGLFLYPDNPKLPS PFYIQPGKAGGALPGDKVMAKILSYGGVQKDEKRGSRGRSPIPRGKRSPLLSYPVCGVTE VLGASTEPGVDVLSVIRAFSLPEDFPEEVKAEAAAIPMEVPESILNSKTRRDFRALTTIT IDGEDAKDLDDAISLEYFPEKKLYRLYVHIADVTEYVKEGSSLDLEALERGTSVYLTDRV IPMLPRELSNGICSLHEGVDRLTLSCIMDYNEKGEQLSHEICPGIICSDKRMSYTGVTAV LEEENEATSTSIDRKKGTSKTSIDTENETFETSIDKRKEDYSSYLPFKDLLLHMRELSRL LRHKRVERGGLDFDFPESKVIFNEKGQIAEIRSVIREESHKIIEDFMLAANETVAEEYYW RDIPFLYRVHERPDFDKWQELSRILSNFSILLRAKDPDSIRPKALQGILETIKGKEEEMM LSNLILRSLKQAKYSVECGEHFGLASKYYTHFTSPIRRYPDLQIHRIIKENLFSQENEKR FAHYSRILPDVAMQSSLRERRADEAERDCMKLKKCQYMKNFLGESFPGTISGLTEYGIYV TLENGIEGMIPLRMLNDDYFIFIEKEMITRGERSGKTFRIGDSMSVLVYAVDTLSRTIDF VPAPELPEE >gi|333758476|gb|AFIH01000001.1| GENE 1934 1951346 - 1951813 368 155 aa, chain + ## HITS:1 COG:CAC0716 KEGG:ns NR:ns ## COG: CAC0716 COG0691 # Protein_GI_number: 15894004 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: tmRNA-binding protein # Organism: Clostridium acetobutylicum # 8 149 11 152 155 161 53.0 4e-40 MGDSIKQIANNKKAFHDFFVEESLECGIQLFGTEVKSLRLGQASIKESFCQIRNGECFIV GMHINPYERGNIFNKDPLRDRKLLLHRREIDRLLGKIKEQGYTLMPLRLYFKGSLVKLDM GLCRGKKIYDKREDMKKKAQRRELEKEFKKANIRV >gi|333758476|gb|AFIH01000001.1| GENE 1935 1952823 - 1955246 2344 807 aa, chain - ## HITS:1 COG:CAC2356_2 KEGG:ns NR:ns ## COG: CAC2356_2 COG0072 # Protein_GI_number: 15895623 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase beta subunit # Organism: Clostridium acetobutylicum # 154 805 3 654 654 577 46.0 1e-164 MNTSMNWLKAYVPGLSASGKDFGDRMTLVGNKVETMEDLGENLEKIVTGKILSVKKHEDS DHLLICQVDVGKETLQIVTGAPNVKEGQVVPVVLDGGKVKVDHEGKHPEGGVSIHNGKLR GVESFGMMCSIEELGSDRNFFPEAPERGIYIFPEGTPVGEDAPALLGFRDILHEYEITSN RVDCFSVVGLAREAAAAFGQAFHFPEIKKVGNEEKLSDYLTVELKDSELCSRYTARLIKN VRFAPSPSWMQIRLRTAGIRPINNFVDITNYVMLELGQPMHAFDYEDISGQKIRIERAED KEKFVTLDGVEHELDSSILCIKDGEKTIALGGIMGGENSMITDKVKNVVLEAACFNGTNI RLSGRKLGLRTDASSYFEKGLDPNLCEMAMDRACTLIEELHCGEVVGGMVDCYPVKKEEK HLSVSISEINNLLGLHLSGEEMKAYLLPLEIKTEVKGDSLELVIPTFRQDLERMADIAEE VARYYGYDKIPSTLPLSGTVGGMHPNLALNRSLRHLAEALGYNESYFYSFESKKVYEKLL LPENASEWQQIMISNPLGEDFSVMRTSSVPGMLQALSLNNRHKNKDVKLFEMAKLYIPKS LPLTELPDERMTLTLGFIGEGDFFSLKGEIEELLTHCGLNGRFRYDGNCEKPYYHPGRKA NILYEGKVLGTMGEIHPDVLKNFDLKERAYVAVLDLEEVYPLAGDHKKYTPVAKFPAVSH DFSLLVPLNVTAGEVEDEIREAASPLLEKVELFDIYEGAQVLAGFKSLSYNVSLRAKDHT LSEEEINKVRGDLLAALEKIGVKLRDM >gi|333758476|gb|AFIH01000001.1| GENE 1936 1955259 - 1956281 974 340 aa, chain - ## HITS:1 COG:CAC2357 KEGG:ns NR:ns ## COG: CAC2357 COG0016 # Protein_GI_number: 15895624 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase alpha subunit # Organism: Clostridium acetobutylicum # 6 340 5 339 339 441 61.0 1e-124 MNTFNLEEIGKAAEERLRSAMDMNSINEIRTHFLGKKGELAEAKKALKDLSAEERPAFGQ LVNEVSQKIEKEIKERAAELERALQDARLSAETIDVTLPGKKIRYGHAHPNTLALEEVEK IFIGMGYEVVEGPEVEYDSYNFEKLNIPKGHPARDEQDTFYINSNILLRTQTSSVQARYM ETHKPPLRMICPGRVFRSDAVDATHSPSFHQVEGLVIDKNIHFSDLKGTLDLFAKELFGQ DTKTKLRPHHFPFTEPSAEVDVSCFKCKGKGCRFCKGEGWIEILGCGMVHPKVLESCGIN PNEYSGFAFGVGLERIALLKYEIDDMRLLYENDLRFLEQF >gi|333758476|gb|AFIH01000001.1| GENE 1937 1957053 - 1957715 372 220 aa, chain + ## HITS:1 COG:BS_azlC KEGG:ns NR:ns ## COG: BS_azlC COG1296 # Protein_GI_number: 16079724 # Func_class: E Amino acid transport and metabolism # Function: Predicted branched-chain amino acid permease (azaleucine resistance) # Organism: Bacillus subtilis # 8 184 28 204 254 209 59.0 3e-54 MSEKQKKALKAAFPHTIPILTGFLFLGFAYGVYMHSAGLSVLYTFFMASLIFGGSLEILA VSFLLSPFAPLETFFLAVMIQLRHLFYGIAMLDKFPKTGWKRFYLIFGMCDETFSINYSA EIPEDTDPEWFMFFVTLLNQSYWVIGSCIGTLLGNVLPFSTEGIDFVMTALFAVIFMDQF LKEKIIFLPSWAFPFPFSLSLFLKRKTLSFPPCSGLPLFY >gi|333758476|gb|AFIH01000001.1| GENE 1938 1957773 - 1958105 267 110 aa, chain + ## HITS:1 COG:BS_azlD KEGG:ns NR:ns ## COG: BS_azlD COG1687 # Protein_GI_number: 16079723 # Func_class: E Amino acid transport and metabolism # Function: Predicted branched-chain amino acid permeases (azaleucine resistance) # Organism: Bacillus subtilis # 1 103 3 107 110 104 56.0 4e-23 MTVWQRIITILLCILGTMLTRFLPFILFQKNTPKAVQYLGKVLPPASFALLLVYCFRNVS IFSGNHGLPEFLSLGLTIVIHCWKRNMLLSIFSGTVLYMLFRQGILALPL >gi|333758476|gb|AFIH01000001.1| GENE 1939 1958121 - 1960151 2147 676 aa, chain - ## HITS:1 COG:CAC0631_1 KEGG:ns NR:ns ## COG: CAC0631_1 COG2199 # Protein_GI_number: 15893919 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Clostridium acetobutylicum # 314 611 226 522 525 102 24.0 2e-21 MGLLILEIGILMVSIYGQGLFQLIHNNSREIIESRVEARRNYLESIMVNQWMNVGQTVQK INQLADGLYEAGKLDIEAIDDSSENAAPFLNAVTDDLITMMRTNHVTGAFLILNADDLKE GMESGQYQDKPGLYFRDLDPESKPSSQNLDLLIERSPFLVVRNKQMTTDTTWNTSFQFGK ANIPYYDFLYQPTEACFHYDEKVGWEDLGYWSKPYTLFGEDRQAIAYSVPLRLSDGRVYG VLGVDVLLSYLNSNLPEKELDSSGTASYFMSIEKMGSDVLSDSTYQELIRFESMETTIED DIDLETDGVERDTYAYSIPLRIFSTNGPFADLEWRLGAEIPYRTMNRFADRMFYVMGVTV ILTILIGLLGSLFISIFLQKPIKALASEVRRNKPNEKLLLKKTGILEIDQMSEALEDLSD RLLREQENLQYERDHDFLTDLYNRRAFGRRIRELLDHHGSGNATGAYIMMDLDNLKMVND SFGHEYGDKYIRCASDAMREALGSNALYSRISGDEFNIFIFDEDGNRSKINSLIEKLQKT IDESFIVLPDGTKKMLRLSGGVSWYPDGGVTPDELQKNADYAMYIVKKTTKSHFRVWSQA TDLGKEKDEGEKKGVEKPDKPDEPVEAKAGNPTKEQAAEDNLTKEQAAEDNSTKEQAAEE NSTKGQAAEENKEKGS >gi|333758476|gb|AFIH01000001.1| GENE 1940 1960209 - 1961666 1180 485 aa, chain - ## HITS:1 COG:no KEGG:CDR20291_0675 NR:ns ## KEGG: CDR20291_0675 # Name: not_defined # Def: putative lipoprotein # Organism: C.difficile_R20291 # Pathway: ABC transporters [PATH:cdl02010] # 1 481 1 481 486 345 39.0 3e-93 MKRKDLPLLLFFFLCMMLLFSCKKKANRQEDKAYTYKRSKENIELNIWSYYSALQQEVFL KTVDEFNLTRGKDLNITVHVMSPGSMNDLEANLFALTDKNFAQGTYPDMAFMYRDTGKVL DQKGYLVDLSNYLTKKELDDFVPGFLEEGRLGNQREGIKILPVAKSTEVFYLNATAWKSF ADATGATLSDLDSREGLVEVAKKYYEYTDALTPEADDGKAFFGQEDFATYFLVGAKQMGV DLVSVDASGKVIYNFPEDVLHKLWDYFYVPYIKGYFGSSGRYRSDDLRTGEIISYVSTSA SYSYFPEAVILSDQEYFPIEATVLPTPDFVKGQKIAIQQGAGIGVLKGEEQKIKASIEFL RWLTSESVNSKFALSADYLPVRSDSLTVQTVDVIKGRGTNPAIEEALKTVSSHTMYYIPA ADNISTLREILENTLKDKAIEDKKAIETAVASGLSKEDAVGEYDTEENFTLWYESLLSDI EGIKG >gi|333758476|gb|AFIH01000001.1| GENE 1941 1961965 - 1962354 216 129 aa, chain + ## HITS:1 COG:BS_flgB KEGG:ns NR:ns ## COG: BS_flgB COG1815 # Protein_GI_number: 16078681 # Func_class: N Cell motility # Function: Flagellar basal body protein # Organism: Bacillus subtilis # 1 122 1 121 129 59 36.0 2e-09 MSLFYGNGIALTEKTLDLLWGRQNITVNNIANVDTPNYKSKYLTFENELLHRISTAEKGG QKKVHVARAIDGQRARIHSTRNESSRLDGNNVDMDQEQVELVKTTYAYQYMVNSVNNDIK RLMAAVKSF >gi|333758476|gb|AFIH01000001.1| GENE 1942 1962409 - 1962558 107 49 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTSVRRDASDFLRIYYFSVFYYTTSGIEKKDGSTAPAVFFWHYDSLLID >gi|333758476|gb|AFIH01000001.1| GENE 1943 1962723 - 1964801 2260 692 aa, chain + ## HITS:1 COG:CAC0118 KEGG:ns NR:ns ## COG: CAC0118 COG0643 # Protein_GI_number: 15893414 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Chemotaxis protein histidine kinase and related kinases # Organism: Clostridium acetobutylicum # 2 681 4 638 649 445 38.0 1e-124 MDSTMEGMLDTYLLETESLLDKLDEMLIAAEKVGDFSTDDVNEIFRIMHTIKGSSAMMEF TPISSIAHHIEDMFFFIRDKGIDSLNGEQKRELFDLMFRSEDYLRSGLEKVKAGEELDNN VDAFAGEINGFLAKISGKDGDNSAAGAASTQTASASGERVLPNDPTAKKFIHVFLDEGIG MENLRAFMIVNAIKEFDLEFRYYPEDMDSNPETAQSIIDSGFFLAFDNDETLDKGEKVLR EQSHILSYEIVEGKKEEVKKEETGNAKESTPKAQGDKDNGNAQQAAQQKSAAPVKQSLIS VNLQKLDSLNDLVGEIVITESMVTSSPVLRMLPQESLDNFMKSARQLRKLTDDLQDIAMS LRMVSISGVFQKMNRIVRDMKQKLGKEVKLTIIGEDTEVDKTIVDSIQDPLMHIVRNSMD HGIEETKEERIAAGKDAEGELTLSAFHTSSEVIITVADDGYGMNPEKLLDKAEEKGLLYK PRSEYSKKEALGLIMLPGFSTNQSVTEFSGRGVGMDVVKKNLESVGGTISISSELGKGST FTMKIPLTLAIMDGMKVNVGDSIFTIPIVNIRQSFKVDDAEVVFDENGNEMVKRMDVFYP IVRLNNFYGIEGKYTDLADGVLIWVEANDKSCCLFVDDLIGEQQVVVKPLPAYFNAYNLK DSGINGCSILGDGNICIILDVLGLYSQAIENN >gi|333758476|gb|AFIH01000001.1| GENE 1944 1964812 - 1965309 600 165 aa, chain + ## HITS:1 COG:CAC0119 KEGG:ns NR:ns ## COG: CAC0119 COG0835 # Protein_GI_number: 15893415 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Chemotaxis signal transduction protein # Organism: Clostridium acetobutylicum # 29 141 20 130 168 82 41.0 2e-16 MGEEELMDDLLEGQESVEEADSIDAERCLTFESGGMVMYMSTSYVIEIINDHSITALPIV PQYVKGIINLRGSILPVIDIRLLMDKEAEEYTSKTCIIVLNIDSVSIGIIVDRVRQVIDI DLSEVQPIPLRNRQKLCNGMITLDSGEVAMSFDAEALVQSSSDAV >gi|333758476|gb|AFIH01000001.1| GENE 1945 1965321 - 1966136 433 271 aa, chain + ## HITS:1 COG:BB0040 KEGG:ns NR:ns ## COG: BB0040 COG1352 # Protein_GI_number: 15594386 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methylase of chemotaxis methyl-accepting proteins # Organism: Borrelia burgdorferi # 3 269 13 282 283 205 43.0 6e-53 MYDLSDEDFKRLYSYMQDKFGIDLSRKKPLIVSRLSSILEKMGYRDFHSYVSDILKREDQ EMLTTLLNKLTTNYTYFMREESHFDYLENVVLPELAKKHARDKVLSIWSAGCSSGEEPYN ISMYLLEYFGKLPGKWDTRILATDISHNVLSKAANPRYPEESLEKLPKSWKNKYFVPLGD GFYTVTEALRKNVIFRPFNLMEPIHFKRDFDLIFCRNVMIYFDQATKDALVKRFYDVTYP EGHLFIGHSEGLTKQTCPYQYIKPAIYKKEA >gi|333758476|gb|AFIH01000001.1| GENE 1946 1966224 - 1966817 377 197 aa, chain + ## HITS:1 COG:YPO1679 KEGG:ns NR:ns ## COG: YPO1679 COG2201 # Protein_GI_number: 16121941 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain # Organism: Yersinia pestis # 12 196 157 341 349 191 51.0 7e-49 MKDFSFPKNHFQLIAMGASTGGTEALLAVLEKLPGNLPPIVITQHMPPVFTNMYAERLNR ICKMEVREAKDGDPLYPGLCLIAPGGLQMQVLKDSSGMRVECKEGEKVSGHCPSIDYLFS SVAKAIGAHAVGIILTGMGKDGANGLLSMHEAGAYTLGQDEKSSIVYGMPMEAYKLGAVD RQGNLSEIANYLLSAIQ >gi|333758476|gb|AFIH01000001.1| GENE 1947 1966827 - 1968083 1274 418 aa, chain + ## HITS:1 COG:no KEGG:Closa_3435 NR:ns ## KEGG: Closa_3435 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 233 416 58 237 241 159 44.0 2e-37 MGIFKTITHKLLMCSAKQLGIAAVASLSVMTASFSAIAYNGYKESLKQMDAKKEGSVSGE SRFQQVFYNHTADRSDSVQNEGATVKEAVSIDSNAPSASENTASEYPKKNSSSKTSENET IQSEEDTNSAEDTEGTTAETTEPATAASSAEAATDPSTSATKPATVATKPDTAATSEAAP APEKAESAPLPKEDLNNPSTIADTAEDAQEPPVIPVKTDPFENYYGTSTFNDYNVYLDTA MGPMYYYNQHDSHWGSYLYGGQDTISKYGCGPTTAAMIVSAFGNVNGSITPKEMANWSAS YGYFAPKSGSYHDYIPAVLSAFDLIVDSVKDGERTPEHVAELLNSGHILVALMGKGALTN GGHFIIITKQNPNGTVCIADPNSYNNTNKEWSPAQLMRELKKNYDAGGPLWSVRAPKA >gi|333758476|gb|AFIH01000001.1| GENE 1948 1968333 - 1968989 627 218 aa, chain - ## HITS:1 COG:CAP0048 KEGG:ns NR:ns ## COG: CAP0048 COG0840 # Protein_GI_number: 15004752 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Clostridium acetobutylicum # 110 202 241 333 382 72 46.0 9e-13 MAIQIQDFAGKEQFQSILRDWAIATGLEAMVQATDGKTVYFADAEKREPGKADTLDRSSH EFGSSSIQEELQYQGEKVATIFLKDDASVEQERGEAAIRLLNVSLSNYLEAECSESRFHS FVDKLTSGINETQSLVKEIRKSTNDLKSIQSRQKILALNANIEAARAGEHGKGFGVVADE VGRLSDSSSAVNEKISSVVKRISDVVNSISGEELVEEV >gi|333758476|gb|AFIH01000001.1| GENE 1949 1969216 - 1969305 90 29 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAELKLHVYPFYTEVGNGVMGNRTEPISY >gi|333758476|gb|AFIH01000001.1| GENE 1950 1969285 - 1969737 385 150 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227873397|ref|ZP_03991654.1| ## NR: gi|227873397|ref|ZP_03991654.1| hypothetical protein HMPREF6123_1593 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_1593 [Oribacterium sinus F0268] # 1 150 1 150 150 171 58.0 2e-41 MQFQLCHENDTSLRLRLDRHHLSGKEEQILSDILSLHPQITGIQIYPATAGLRIFFKGSK AKLLESLEAISYGNILFLAEGLPKTEDFHVQLLPSGKEIIRELSKTKKMNPSLKKKIGKE ISLEAIADLILPTPLSLAFHVYQLLLLAKA >gi|333758476|gb|AFIH01000001.1| GENE 1951 1969714 - 1971051 909 445 aa, chain - ## HITS:1 COG:SA1721 KEGG:ns NR:ns ## COG: SA1721 COG0210 # Protein_GI_number: 15927479 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Staphylococcus aureus N315 # 9 280 10 297 730 60 25.0 5e-09 MEKSKRFWTEQRKREYIRSAEDNLFIIAGPGTGKTTLLSRRILNQIMGGERLSHFLLIAF TEEAVQEFKQKIKKHLYREIAINREASHRLKKKVHGIDLMHIMTFDDFCLWVLSMKKKET TEEKERNEIEKSEPGKEAELGEEAKIGEEAKTGEEKEKSEEVLPVEERCYRLLQEDKALL QVLRRDFSKIYADELQDLNQIQLNILLSLATDKKGKMRHNCLFMVGDPRQTIYQEAEEDK QVFFDMKKKMEEKKNVRVLYLNENYRANKILVDWINEAFRKRMHSYRDMYPSQRKEFLKH CPFHGVFRREFTGEDGIALRELVSEILFAYPDLKERDFLILCKSKEKQEYYKKSLSGVGF SDSALDKMVFEAHLSKGLNANIVIIMEAGGNCSGKTENRLTRLEYVAVTRAKHVLIFLKG ETEGWFCDQYYRLHALQELSLGQKQ >gi|333758476|gb|AFIH01000001.1| GENE 1952 1971106 - 1972044 1095 312 aa, chain - ## HITS:1 COG:CAC3104 KEGG:ns NR:ns ## COG: CAC3104 COG0202 # Protein_GI_number: 15896355 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, alpha subunit/40 kD subunit # Organism: Clostridium acetobutylicum # 6 312 6 315 315 259 47.0 5e-69 MENAMKPVLEVEELIEDQGFGRFVCTSLVKGEGTVLGNSLRRILLSSMPGAAVSEVKIDS VYHEFSSIPGVKEDVSEIIMNLKKLAVRYTGSSEEPVMAYVDYMGEGIVKASDIKVSSEI EIMNPDLVLATLSGEDAKLYMELTITRGRGYDGANTRDHSDLAIGVIAVDAIYSPVKKVN VFIEEQGEEEKLTLDVSTDRTLAPEEAVSLAARVLQTHLKLFIDMEGNVRENAGAGSTDE MKSDELNKSIDELELSVRSYNCLKRAGINTVEDLCAKTMDDLMKVRNMGRKSLDEILNKL ESMGLRLTTKAE >gi|333758476|gb|AFIH01000001.1| GENE 1953 1972166 - 1972444 359 92 aa, chain - ## HITS:1 COG:no KEGG:Rumal_3364 NR:ns ## KEGG: Rumal_3364 # Name: not_defined # Def: helix-turn-helix domain protein # Organism: R.albus # Pathway: not_defined # 10 78 2 70 74 77 46.0 2e-13 MEECRTLEYPVIDVYATGKNIERLRKEKGFSVKDIASFMGFVEPQAVYKWQQGKALPSLD NMFALSILFQVSIEEILVRQLDGLENGKHLAA >gi|333758476|gb|AFIH01000001.1| GENE 1954 1972961 - 1974025 829 354 aa, chain + ## HITS:1 COG:no KEGG:SGO_0803 NR:ns ## KEGG: SGO_0803 # Name: not_defined # Def: hypothetical protein # Organism: S.gordonii # Pathway: not_defined # 3 282 9 283 307 101 28.0 4e-20 MAVAEALGLKYLEDIGEAAGVFNGYFISIRYSGKFHEGSFSLSQMGQHPSKDLLKLIDKS VKQVSHLNLSGYLVNAVFKNGFTDKGTIQNMIDGIAQLTTHFSENELTNCSEVDGQEENI SIYCLSGKCHIYTRNQFDALRLNAEEKRQKEENRGIIGVILGIFGALIGAFVGAIFVFFI ARLGYISLYGGVIMGFSTVLGYKLFAGRFGLIGIPVCLAFMGIMAYLVNRLDFSFYLSEG FYGDFNHVLECFQYVRERIQETGEPQVAADYLHNLYLLLAFTLATGALATITTYFTDKKA LPSYPVLNESYSIPTAGSYSATPDLSALSGLGEYADSNRDYTSGAGDDTDTNAN >gi|333758476|gb|AFIH01000001.1| GENE 1955 1974153 - 1974356 333 67 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSQKQILTIVVSLVCAGIAFAEIQNIRYAKQIDTPTTIHPIRLIACIAIVLMGIYSLVTG NYILNVG >gi|333758476|gb|AFIH01000001.1| GENE 1956 1974731 - 1978669 3706 1312 aa, chain - ## HITS:1 COG:SP2136 KEGG:ns NR:ns ## COG: SP2136 COG5263 # Protein_GI_number: 15901950 # Func_class: R General function prediction only # Function: FOG: Glucan-binding domain (YG repeat) # Organism: Streptococcus pneumoniae TIGR4 # 28 143 517 619 621 62 33.0 7e-09 MVKRGFRKLAVVAAMSLMLNPAALVFAETGRVNTDGSWKVEEKKWIFTDEKDRKITGWVV YNKNWYYLSPEDGSLKTGWLTLNGKSYFLSTESGQFTGRLLSAWQWIDGYCYYFIVEDNA RYGELFTGGTTPDGYTVDSAGRWTKDGVAVYENGKGLSSSENAQQVAGADRPIPSGGTES SDGRSGSSLRGSSRGSGQSSGSSGAEQNTSQDKQKEDSGKKGSATKEDDTKKEEQEESKT ASLVATAQTKLVNTELGNFLSLAFLDGTKEDYTVTVDGTDISSALTNVDDSGQIAKWRAT VAHPKKLVISRKSDGKTEEIELEEGKAQAEESKVEVTAGDPQDHPKYLLAQGMATVFDRL LPNNGKDGKERFTPKKSTFTLFEKKKEDLDAIQAEFYVKPVVIDAEGNGVGGKGIKAEFS LGTDKEKDWFNGINQISLLRYEDNTVLNRNLSFKKTDPVSGKHGFVGTLQVPVGQDNMRS RGLYILAIHSKKTEEVITLPIELQSNTRFQVDIAQETMAPKTGERVKFRINGENGESFGN EIKVDDMQVTLEKPSGKKEKLSYIDDYFNFGGNFILYGTSSNKEKTVNTDEAGMYTIKIK YSGYPTLSKQFIVYKGEGQNTEDKQEDAARSSARAAYSGKKADAVSAATSGKTSTHAGKK ESGKKGKESVYDGVSSATGTVNTRVNVVFDYDLLENALVLNEIKALNEDARNVLVWYYGM NFDRFGYLFDEGAKNYYSVEKYMNALKSDETKGGKIRSYSEYLEEAKADDFNGVSEVQFV LEDGTLGSLSDFKKHKGEDTPSFSGTTIKKGEEIVLHTDNTAYLSKIQGVYTDGSSENQM NYNYPKRVTIDSEKGTITLHRYAFNFLNPATPEVGKHTITLDAGADYKKVDITLTITQEE ITEKPTLVGEAAVGKDLTLSLPRNAILRFAGVSLQKGDGEVKTLLDASAGGISGNDYYVL DKENDQLIIKAGRFKEAGEYTVYVKVKEQNGTLNTTFQVKEKSDTPEEPKEEEDKGLEAP EVKYFEEDRKGYNNRNVLSFVPEKTYPKKDVTDYLEKVNKVVVNGEEYKKASYYTEVNRK DATYALHNNNGGGNYSIICLSPSAFVEGENVIEVYAEGYKKLQYKVTLKGKEEADSIAVP EGAEVKKAAFGGTYYVSFGRNRKSAEVTAYIAKVKSVSVNGTLYTRINYSGNVNYKEDSF ATTDIGGNNGKHNAISISGSKMTGVKDKVIVQAEGYNDLVLSYPSTASRVRRSLLEDPFL EESLDSEEKREESTEGSEITESAVTMESTETSEGVETTGSAVTAESAENTAE >gi|333758476|gb|AFIH01000001.1| GENE 1957 1979040 - 1981070 1648 676 aa, chain + ## HITS:1 COG:lin0372 KEGG:ns NR:ns ## COG: lin0372 COG4886 # Protein_GI_number: 16799449 # Func_class: S Function unknown # Function: Leucine-rich repeat (LRR) protein # Organism: Listeria innocua # 304 495 111 296 656 70 32.0 1e-11 MNLTKMECPNCHGTLNIPEGMKEGFVTCEYCKTKVYIEPHKPNITQNIHIDNLNMGQRTA PVRQDLGAVQAAAIIGGIVFIFFMFILSNIFRTPHTTSIGSTQTTATFRSVPEDETVKSF VEKAFGKQLKDITTEDYNSIAALSIHIVNSTDSDKSEKWKFDYAKSVNEDGTAKDPETIY LPATDSLDEADMQVFTGLTTLSLGYQVHFNYDTDSDAKTLKSLTNLRYFSGENEDFQTVA KLFAHPEQIIGLYNMMLDDDATGDSYSDENTEGEDPDAFFKAFSSLEELTVHIDDDYTKG LLFLRNFPNLKTLALGFYGDKPTDLSPLSSLSSLSKLDLLGTNDSTMENIGVLSGMPQLE QLSLRNLKDVKDLNFVQNMPKLKSLNLEDLAILNLDGLSGHLSLNSLSIDCSSLENVNAL STLSSLQTLSLGYHTYDIPDLHGLSALENVKCYSMDRDSISHMPSIKNLTVDNYGSEYSA DFLQGMNALTNLTIIGNGITDEVEPDLGPVLRALPSLSRLEFQDSPFSRYKDYTETFTNT GVKELLFTPNKNQVASNDPVLPVSLSRMADDNTVESLTLTQAILRNVDNESEDFSANIQP FLSHYKALKRLDISNNKLQSLDCLNGLTTLEEVDFSNNYISDISVLRNLPNLKRVKMSGN SIVNAELLPDGVEVVG >gi|333758476|gb|AFIH01000001.1| GENE 1958 1981174 - 1981659 394 161 aa, chain - ## HITS:1 COG:CAC2475 KEGG:ns NR:ns ## COG: CAC2475 COG3467 # Protein_GI_number: 15895740 # Func_class: R General function prediction only # Function: Predicted flavin-nucleotide-binding protein # Organism: Clostridium acetobutylicum # 5 156 2 151 154 82 33.0 5e-16 MEEEFRKMRRFKQEITEEECRKVLKEAPRGVLALHGENGYPYAIPLNQFYNEEDGKLYFH GALQGLKLDLITKNNKVCFTVLDEGFKKEGEWPWHFHSVVCLGRMEIVENRDKVLSICRK LAERFYPTKESIEEEIRNAGSRVNVLVMTIDRMTGKLVKEA >gi|333758476|gb|AFIH01000001.1| GENE 1959 1981830 - 1981922 71 30 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDKIRVFLLLYKTNYYMIEIILLYVFYDFR >gi|333758476|gb|AFIH01000001.1| GENE 1960 1981952 - 1983694 240 580 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 336 565 2 237 245 97 25 3e-18 MNVYKKVFHYVPEKIVPGILSILTSLLSGVILVYAYMLLYFFLENLILFRDEGQSYTMSL KIVLALTLAGLCYLFSGVLSHIFAFRLETNLRKKGIEGLASASFRFYDLHSSGYIRKTID SNAEKTHQAVAHMIPDSAQAFLVPLLSLALGFFVSLRVGVILLLLVLVSGFFLQKMMGGS QFMKFYQESLNHLSAETVEYVRGIQVVKLFGNRLQSFKAMKEAIENYAKYAFEYSLSCKT PYVLYQWIFLGLIPILSIPLSFLLVKEPQPEKLIIDLIMIFFLDGVIMVAFMKIMWSGMY IFNASFAIDEMEKLYKAMQEDSLQYGKEENFPNYSMEFQDVDFSYGDKKVLEGLSFRLEE GKSYALVGHSGSGKSTIAKLFSGFYKADKGQIRIGDLPIESYSKNALCKAISFVFQDSKL FHKTIYENVLLGKPDAAAEEVHHALDLAGCREILERFPEKENTLIGAKGVYLSGGEKQRI AIARAILKDAPIVILDEASASIDADQEYALQNAFKNLIQGKTVIMIAHRLSSIQGLHEIL VLEEGKIVERGSSKELLQKDSRYKKLWALYQTTEDWRINK >gi|333758476|gb|AFIH01000001.1| GENE 1961 1983691 - 1985427 221 578 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 335 556 132 351 398 89 30 5e-16 MMNWFKKQFSLTEQGAKNLQKASLYCFLTYCINMGPVTLLLYIANLLLENAGRKAFTPWE LIVPALIILFFLYLLLSKEYVCLYNATYKESANLRKNIAETLADLPIAYFSRHDLSDLSE SIMSDVERIEHALSHSVPKIVAMFFFFPIMGILMCFSNWKLSLATLLPTIFSFLLVPLSR KLVLQNNQKYYHLLRENAEAFQEHIDLHQEISSFLPDREVKEALFQKMDLQEKLHLKTEM GSFIVMGCSSIFAFLSVATVIFVGFPLYQSGSISILYFLGFIIASMKLKEIFDISKESMM EIFYIAPAVQRISEIKAAKKQEGVSTALSDFSIDFQDVSFSYNEDRTILKDVSMSVKEGE LFALVGPSGCGKTTILRLLSRLYDAKSGKIFIGGKDLQNTATDSIFQKISIVFQEVNLFN TTILENIRLGRGDATEEEVREAARLANCLDFIEKLPDGFQTRIGENGAELSGGERQRLSI ARAFLKDAPILLLDEIAANLDIDNERKIQESLSSLIRGKNRTVVLISHRLKSIEKADRIL VLSSGEVDAVGTHEELLEHSKVYRNLVEKSRLAEEFSY >gi|333758476|gb|AFIH01000001.1| GENE 1962 1985474 - 1986058 526 194 aa, chain + ## HITS:1 COG:no KEGG:FMG_1400 NR:ns ## KEGG: FMG_1400 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 1 194 1 194 194 204 61.0 2e-51 MNRNKLTIKDLVSIGVFAVIYFICMFAVGMMGVIPILFLVYPAAYALIGGPIVMLFMAKV NKPFGLLIFGMITPCIMFLFGHTFVVPLLSLLFCLLAEGIRRMGNYQSGSATMLSYAIFS LWPCNSLLQMLLLKERYMEMVIKEMGENYGNAIEKLISVQNMAIVYVCTFLFGLLGAFLG RKLLKKHFEKAGIV >gi|333758476|gb|AFIH01000001.1| GENE 1963 1986076 - 1986822 359 248 aa, chain + ## HITS:1 COG:SP1437 KEGG:ns NR:ns ## COG: SP1437 COG0619 # Protein_GI_number: 15901289 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Streptococcus pneumoniae TIGR4 # 98 241 1 146 147 151 54.0 8e-37 MQNKSNLERTIKEKPWAEKRNPFNPNPLTKLLVLLFLGFTIMHYLPFYGEWAVVLLFSVF FFLNGFRRTALFAPLVFAALCFIPGYSAQYFMPVPLRILFSFLYIFRLLFLPYLAGSFFL RTSDVGAILSSMDFLHIPQCISIPIAVMFRFFPAFTEEKKAIERAMKIRGIQTWNPMQNL LYVSIPLLIISANIAEDIAKAAECKCIENPVKKTRYNTVRLQIVDAVFLFCILLILGLSY FGVHLLHY >gi|333758476|gb|AFIH01000001.1| GENE 1964 1986842 - 1988275 996 477 aa, chain + ## HITS:1 COG:SP1438 KEGG:ns NR:ns ## COG: SP1438 COG1122 # Protein_GI_number: 15901290 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, ATPase component # Organism: Streptococcus pneumoniae TIGR4 # 1 343 1 353 374 347 51.0 2e-95 MLAFENFFLSYGDSAPVLQDISLTMKEGECLLLTGESGSGKSSLIHAVNGLAYQYYNGKS RGKVLFQGEDLSSLPIYKIALRIATVFQNPKTHFFNINTTRELLFTMENMGLDRAEMDRR MEALLSIFPIEKLLGRNIFALSGGEKQILALASAYLSGCPFLVLDEPSSNLDEGSIAVLK TMLHTLKEKGMSILVAEHRLYYLMDFVDRVAFLEEGRLSKLFSREDFLALPEENIKAMGL RARTKPSLSLPEWKNEGALKYQKEEHCASFSFGKIYGIVGENGIGKSTFLRKLSGLENER GSHFSLFGKELSKRQRLALSAMVMQDVNQQLFGDSVEEEMELGKTGQKRSLKERYEGIID GQENEQNKPKPCHTTKEELLSTLGLSALKDRHPMSLSGGQKQRLAIAATLYQEAKLFFFD EPTSGMDQKNMLRIARLLKSAIREDRIFFIVSHDYAFLQEVADEVVEMDCLTGKLSK >gi|333758476|gb|AFIH01000001.1| GENE 1965 1988203 - 1988400 79 65 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKIKKEREWSDWGGSVLRRKGEITWEKDCFLVVVSKPRKMSSYLESFPVKQSISTTSSAT SCKKA >gi|333758476|gb|AFIH01000001.1| GENE 1966 1988547 - 1990712 1598 721 aa, chain + ## HITS:1 COG:no KEGG:Pjdr2_6097 NR:ns ## KEGG: Pjdr2_6097 # Name: not_defined # Def: hypothetical protein # Organism: Paenibacillus # Pathway: not_defined # 51 471 77 518 611 183 32.0 2e-44 MKKNIKNKKNVALSLLGIGMVLALNACSASGQNANAATLSNAEAITKGEKTVITIQNDTV SINGNGATADGKTITINEAGTYQFSGKLSEGQIKLKTDGNVNFIFDNFSLSNSKVAPIVG ETGNLNIYLNENTENTVSDQRAANTEEENTSTESTNAQNGDGNSHENTKTDTAEEAYDAA IYSENDITISGKGKLTVEGGYEDAIHSKTNLTIENGTYTITASHHGLNAKKLLTVKDGSL DITTVEDALHSKGDVTVEKGTIDINAGDDALHADNTLTVKDGTINIKNSNEDLEGITVNV EGGDIAISSTDDGINAAGESEDDSSVNYAINISGGTIKIVPGGDGIDSNGDLNVSGGTII VDGPSDGGNAPIDYDGTATVTGGTILASGNSGMFQGFNGNNSTQNSIVYYLSGNGSAGDT IKISDESGKELFSASNLAQSYNAVLYSSPELENGKTYKVSAGSNEESVTINNTTNTIGNG GMGMGMGMGQPPMMGNNGQNDGNDQGRPPMPPMGENSQGEMQGQPPMGGRNGKHGGHGQN NSQNDMGQPPMMGNNGQNDGNDQGRPPMPPMGENGQGGMQGQPPMGGQGQRGGRGQNNGQ NGMGQPPMMGNNGQNDGNDQGRPPMPPMGENGQGGMQGQPPMMGSNEQHSGQHQDQGQNS GSKKKNKSKSSSNKNSQHNKPQKPNNAGSAKPNNNEANSQKQNTNNAAKPNDATSGSTPT N >gi|333758476|gb|AFIH01000001.1| GENE 1967 1990736 - 1991827 669 363 aa, chain + ## HITS:1 COG:FN1094 KEGG:ns NR:ns ## COG: FN1094 COG0463 # Protein_GI_number: 19704429 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Fusobacterium nucleatum # 1 345 1 360 360 197 36.0 3e-50 MKRQFALIPAYKPNENLISFIQSLETRGLEVVVVNDGSGEDYLPLFHKIQEQSLATVIHL EKNQGKGAALKAGLSYLNTVNDDFQVITLDADGQHSIQDALFLLQRSLENEGSLLLGSRA QSKDSPLRSRIGNYITKKVFSLTTGVKVEDTQTGMRAFSKQLIPKLLKIQGNRYEYEMNM LLDFAKEGIPIREYPIETIYINDNEESHFDTVKDSIRIYSQILKFISSSLLSFCIDFLLY TLSFSLSGSILFSNAFARLISLHCNFFMNQNYVFQNASEGTKREHLKEYLSYLGLALSLF AMNTLLLSAVVEILGVNAYLAKIITEILLFILSYFVQKHLIFSKQENAPFHNENIPFRNE YTA >gi|333758476|gb|AFIH01000001.1| GENE 1968 1991931 - 1993055 1110 374 aa, chain + ## HITS:1 COG:CAC2630 KEGG:ns NR:ns ## COG: CAC2630 COG4632 # Protein_GI_number: 15895888 # Func_class: G Carbohydrate transport and metabolism # Function: Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase # Organism: Clostridium acetobutylicum # 181 372 143 347 347 92 33.0 1e-18 MKRLNTKKAGLLYGLVLFSYTSYALLDTFVIPHPMKTVLAESANIEATSGIRESIEAKIN EKLGLSESAEDSLTENTNGNSSYSTGQSTSEAENSSGSAVSSSKANDTSENSANTGGSTN LTASSTVEGGTVIGSYSDSNVSITLKEYREYDSAIYVADVTVSDVSYLKTALASNTYGRN ITDTTSDMANDNNAILAINGDYYGARQSGYVIRNGSLYRNSSGNRDALAIMKNGEFEFVT EGETSAETLLGNGALQVFSFGPVLLEDGSISVTENEEVGMAMASNPRTAIGYLGKNHYVF VVSDGRTSESAGLSLYELASFMKSLGVVNAYNLDGGGSSTMVFKGEVINTPTTNGHSTQE RAVSDILYIGGKQS >gi|333758476|gb|AFIH01000001.1| GENE 1969 1993052 - 1993423 217 123 aa, chain + ## HITS:1 COG:no KEGG:SSUBM407_1757 NR:ns ## KEGG: SSUBM407_1757 # Name: not_defined # Def: membrane protein # Organism: S.suis_BM407 # Pathway: not_defined # 5 108 19 121 138 66 36.0 3e-10 MKKTIRYLFLSVFVFVFSQIYEYFSHGVYSNYMLYAFLIPFLGLSVPSFLLHSLKKALPT YSRFLWKCGIATLTVGSIYKGILEIYGTNGYFEFPYLFLGAGLCIAAIFMICTKKRAISL GTA >gi|333758476|gb|AFIH01000001.1| GENE 1970 1993587 - 1999916 5703 2109 aa, chain - ## HITS:1 COG:no KEGG:Balac_0261 NR:ns ## KEGG: Balac_0261 # Name: fbp # Def: hypothetical protein # Organism: B.animalis_lactis_Bl-04 # Pathway: not_defined # 1600 1970 1600 1954 2696 91 28.0 4e-16 MKEREKTTLSGNGLSRGRVRRKHFAKRGMAYFLTFLMLMGSVQTVTYAEENAKEIAGHLE LGEEKPSLGETEALVKTEERTDRPEEAVTSETTVSSDTTGESEEGSSFEETSEKDKTELS SSEDGNEAIESEEKKKDSSEQKSEEELSEEEKAKLSEEGKKEEEKAEYLKASSFSAQAES GLTVIASFPDDTFFEGTYMKVEPVEEEEKIEEAKKALEKEFQKEDPDAESEIEVLESVDI SFYREINGEVKEVQPKKGKKVEISLQKTEKIKEALGGTEAEQEASAEEELKIVHLSDEHP TEILPVKEEGENLLFSAKHFSTFSIGRRKRDLSQAGHELKAFWKEAPDPNAGTNRASSGH SYTDGSNGEMRKQTELSIIPPENNSNAVNTTTLGVELTLKGDKNTVYKKETVNLYIPARI FKGWEDGYSDNPSQDDYFKKNKITVSADRVNWVYKELPGIIHGLPKAPATNAQSSFNYEV VPKTVDGKTEPYLHLTNYNDLSGGVLFKADIGYNMTPSMLKVEDRVVNGAHKGVYEYNFP VSLEITENGNTVDSKSQDMSVHVETEVKETKVTLKPGTADVNGGVFFNWDPEWGDLNHWD PAWGTKPTGNPKDYFYAVWYVRVDRARGSSQPFNYQFVLDQTGLTEQEKAGGELVGAKKM PMDYRRDYYIYNEDGGNNIEVYAQGGYKNIAKYMNGTDPDPNGADRYLVNPMGQEQVGIS KDPSLYKLPDNEPYLTGHNYSPSGKYNSQLYALLFRYPYSKMKEVTDLYDKGMKISNQIK VTESWADGHTREFTVRPKEDMVIYPRPGGGGKFSFNKYGVDLRQNYLDIFGLQTIYKDGT PAPLRYGNRTKSFTLSTEYTAKNDNVVMDSGSTNYSTTKNDPGTSFGSGVTLTDGKYYLL SSKIRYPSTLNGKYVNSNPDKPDLEGLVNNTNTTDDVYRGDKYTLKDKDYYYSSIYLEGM KVYDVEKVDTTASENLVSFNQKSTLRERKDNYPPVEIWLRKQGAGEGDFFKYGELYYDNT GVLRFRPEAGYENWTSTTDKDRPIDWSNQLSLVNEKFGAPIVGLKLIQNSPYYRTGFDAS YTMQITPTPEMQNAISETMARTDDYNISFLAGAATAEGWQYRDPNPTKLRIGQYWPQVGY ALTPLQINSVMYKSSANFVDHPEKSAQSMTVYLEGSNTGNLPTSLQGPEYTKKYTLKKGT VYDLLPAGTSVEEDSIRVSGWLGGWDLDNASEKLTKDENYTVRFEDNWKGSKQTMMIIDF TIPDVKQSWSSYHNRSGWKVMYTLWNPYTNIVDRGRSVKNTLGFINKDKNTVWNGNYISE ERGKNPGVEKLTFYKDIKEKAAEENPRFTTSVIDRIMPFGPVTVLEAAFTNGVSTAIDPN FLSDNVSYMGDPYSHRLLYQAQATTRTTDIVLFDVLGDTEERNGDFNGVDISSMLTKPSY DKTNSSNTDTLLPKVYYATVVPSKEEMDVSNPIWHVWNYENESTNTVDRKLIKALAFDLR KTQNGKNFILDQQGLLLAKINMIASTDKSKVDPEVKVNNNKAYMYSTQFKGADVPLSSIP DVQTSTSSHRLVKPLIFDLPVRKDYDFKEGSSPPSIKEWFTFVLERADGEPVLNEDGTTV AEMKNPDDHGGLMVFEKLRLLKPGTYTFKIKEKGKNKAAGAGVKSEDMGDKFVTITVTDP DHKKLVSDLKYTKDKPLTFKNIYVVSALDMELKVDKILTAAPGLKKPDISNAFSFTLERV RKDDSPLPPMPIGAGTKDSMTLTNPDKDGGEINFGSITIENQGVYEYIIKESGFFHGVVN DPQSERRIKISVKDVGLGKLFALVTGDEPEFTNTFEPISNEERIELEKKVSGASPATPAL FRFTLRPEETGGQPMPIGSSADSSTIELAGEGHTDFAPITFTKPGVFHYTVEEVNDGIAG YTYDPSVYTLSFTVTQSEDDIYNLIVDRKIYKDGVEVENIVFHNQYKSNSGGGGGGNPPK PIPVGPVTPGGPGEKPQEPEKPTVPDVPEEPTPTPGENVPPAPTIPERIREIEKRIGEIL GEGRKRPLTEAEKKELKRLGEVLGALRKEQSRKVRTADASHMIWYAFASAISCLCLALYY LVDRKKRRR >gi|333758476|gb|AFIH01000001.1| GENE 1971 2000145 - 2001392 940 415 aa, chain - ## HITS:1 COG:SPy0875 KEGG:ns NR:ns ## COG: SPy0875 COG0642 # Protein_GI_number: 15674900 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Streptococcus pyogenes M1 GAS # 32 411 50 410 410 115 28.0 1e-25 MIEQLQKKLTLLLSSVSIFLLLFLLGFLFFFNRNSLYGTMRNALSSAVTKPMDRSTSDSY PIYQIFMKENGEILEHSGEDFFLESDTEEKAVHDALSRIKEGKESFYGSMQGGKLQYYCK KDAPPDGKTAYRIALTDFSKEIGNIRQLSIVLLILFFALSFVIIVLSRFFVRKTVAPVKD AMLSQRQFISDASHELKTPLTVIINNVGNLQKKIENVPALKGEEAEGIRSNIRGIEEMSG RMKHLTESLLDLSRLENWQDRGSQLETVDLSALIEHECMYFEPLFFEKGKSLDYTVEKGL HTLGNENKLKELLSILLENALKYSLPATATALSLKKKRNTLFLSVSNAVEKELSKEEKEN LFKRFFRRDEAHSGGDGYGLGLSIAKEIILMHKGTIKVESEKGRICFHVALSEKL >gi|333758476|gb|AFIH01000001.1| GENE 1972 2001385 - 2002062 675 225 aa, chain - ## HITS:1 COG:ML0174 KEGG:ns NR:ns ## COG: ML0174 COG0745 # Protein_GI_number: 15826987 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Mycobacterium leprae # 1 221 1 225 228 164 40.0 8e-41 MRILIVEDEVLLAKSLQEILEDSGHTVSSAYDGQEGLELARSDHFDLLILDLMLPKLNGF QVARTLRKERNGLPILMLTAKSDILDRVEGLDSGADYYLTKPFDKRELLACINALLRRQG KEVNQISFGNTALDLDSSELICGENMIRLSSKEFQMMKLLLSEGKNNITKNTFLEKIWGY ESDATENNVEVYIGFLRKKLKSLSSDVSIVASRGLGYHLEEEKHD >gi|333758476|gb|AFIH01000001.1| GENE 1973 2002334 - 2003731 1525 465 aa, chain + ## HITS:1 COG:SA0867 KEGG:ns NR:ns ## COG: SA0867 COG2239 # Protein_GI_number: 15926597 # Func_class: P Inorganic ion transport and metabolism # Function: Mg/Co/Ni transporter MgtE (contains CBS domain) # Organism: Staphylococcus aureus N315 # 2 452 6 452 461 236 31.0 8e-62 MNENERVQQDYVQEIIDLLRSGEDIEKLQEKLEEYHANDIASALPLLEEDERKILYNALE NERLGEVMEYAEHGYLYLEEMSSERAAVILSEMEPDDAVDLLKEANPEKKTIWLSKMSLK DRNELQILAAYDESFIGSRMTTNFVFLDKRLNIREAMRSLIEQAAEHDNISKVYVVNEDG SYYGAVDLKELIIARKETNLDDITETGYPFVYADEKIEDCLERIKGYAENSIPVLGENNI ILGVITAQDVLEVYDDEMGEDYARLGGLTAEEDLNEPLIDSVKKRLPWLVILLFLGLVVS TVVGLFETVVAQLTIIMAFQSLILDMSGNVGTQSLAVTIRVLMDERLTGKQKMTLVGKEM AVGGLNGLVIGVFSLVGIGAYLFFFKHQPAHIAIAISSCIGFSLMLSMVISSLVGTVTPI FFKKVGVDPAAASGPLITTINDLVGVVSYYGLTWILLLEILKISG >gi|333758476|gb|AFIH01000001.1| GENE 1974 2003894 - 2006092 2257 732 aa, chain + ## HITS:1 COG:CAC0120 KEGG:ns NR:ns ## COG: CAC0120 COG0840 # Protein_GI_number: 15893416 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Clostridium acetobutylicum # 432 730 222 515 555 219 46.0 1e-56 MKKKQKAKGSFYENLKLRQKMSLILGTLTFFVLLGLLYFLIHSFEITMDKKIDANMAEKS ADASSDLEGLMTKLDAITDNIEQSISFVFAQNDEVGGVPGNPWKIRDVKGNDQTITPMDS VSFRSRVVNSFLPASRYNAEVVILNALYSNMKGEENLEDIGVLFEPNAFYKGIEDYAPIL LRSEVENRRIMNFPYEKYQNIDYYTGAKNKGDTYVSPVYSDSIDPTKKMFAITKPIMANN QFMGVILLDVKEDILLNITQQDPEFPSMFVNLIDGDGLIHSKVEAVNGKTLQELLPEKAA NAISEKMTAKKPFTLQIVNEKGEERREYYNPIDMHGSTWWVRLDISEKDYDKEVDRLVNI GAVAGVATVILLVVVTSLLISYFLKPLQKVSEAGKKLSAGDFSMDLSYKNNDEIGTLMHA MNDVVNRIRSIISDLSEKLSELAQGNFNMEMKNEEYYSGAYRPLFDSINNITSDLSGTMA EIQQSAVQVNSGAEQVSAGAQGLSQGATEQASSIEELSATVNDISEHIKKTAENTRLANT EAQNAGKEVSHSDKQMQQMKAAMENINQKSGEISKIIKTIDDIAFQTNILALNAAIEAAR AGVAGKGFAVVADEVGNLAQKSANAAKDTTMLIEETLQAVEQGTVLADSTAESLQRVVTG TGKVTELVNQIAEASVEQSRAVEQVSTGIDQISSVVQSNTATAEESAAASEELSGQANIL NDLVGRFQLKKD >gi|333758476|gb|AFIH01000001.1| GENE 1975 2006314 - 2008512 2249 732 aa, chain + ## HITS:1 COG:CAC0120 KEGG:ns NR:ns ## COG: CAC0120 COG0840 # Protein_GI_number: 15893416 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Clostridium acetobutylicum # 435 730 222 515 555 223 45.0 1e-57 MKKKQKAKGSLLENLGLGQKMSIIIGILTFLLLLALLFFLIHSFRLSMYKKVDANMADKS AQASYDLEDLMTKLNATANNIEESISFVFDQHDEVGGVPGNPWTINDDDGNPQKITPMEN VSFRSRVVNAYLPASRYNAEVVILNALYANLKTEENLADIGILFEPNAFYQGIENYAPIL SREDLDKRVITNHPYANYQNEIYYKAVKEKGSTFITPVYGDITKPEERMFAIYHPIMKNN QFLGTILMDVKEDILMNITQQDPEFPSMFVNLIDGDGLIHSKSDAVNGKTLQELLPKKAS TAITEKMESKKAFALNIVNEHGQARREYYSPIDMEGSTWWTRLSISHQDYSKEVDRLRNV GIVAGFSTVFALAFACALLIGYFLKPLQKVVEVGEKLSVGDFDMNLSYKSKDEIGKLMHS MGDVVSRIRSIIGDLSEKLNQLSQGNFNVEMKNEEYYSGAYRPLFDSINNITSDLSGTMA EIQQSAVQVNSGAEQVSAGAQGLSQGATEQASSIEELSATVNDISEHIKKTAENTRLANT EAQNAGKEVSHSDKQMQQMKAAMENINQKSGEISKIIKTIDDIAFQTNILALNAAIEAAR AGVAGKGFAVVADEVGNLAQKSANAAKDTTMLIEETLQAVEQGTVLADSTAESLQRVVTG ASKVTELVNQIAEASVEQSRAVEQVSTGIDQISSVVQSNTATAEESAAASEELSGQANIL NDLVGRFQLKEN >gi|333758476|gb|AFIH01000001.1| GENE 1976 2008768 - 2010972 2231 734 aa, chain + ## HITS:1 COG:CAC0120 KEGG:ns NR:ns ## COG: CAC0120 COG0840 # Protein_GI_number: 15893416 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Clostridium acetobutylicum # 360 732 190 515 555 219 39.0 2e-56 MKKGIRVEKKQKRSSISTRLSMILGIASILVFLAMSIAIIRTGEHSISSALDNNLNDKAT MAIGDLQQVISRLESVSMTLENGIHSMHSQHDSIGAAPENQWIVKDRATGNVVTNSGMDA TTFRSRIVNAALPASRYNAETVILDSLQSALTDNKDLVGAGIFFEPYGFSDNVSDYAVYM SAEDIDKKTIMAYQYSFYKDSSWYNGAKESGDMVLTDVYSDTLHPEIQMISLGNPITDEN KQFVGAVILDINTKVFSTIQQTDARFPSLATNILDANGSFLYSMKEQAIGKKLEEVLDKD TYEMLRQNMDKEEAFTATVVNAVGVKERMYFRPLTIHGSTLWSMISIADSEFMAARNQLI LMCALFSVVGLLILIAISFFLIKRALNPLQGIALAGKAVAEGNFDVKVSYDRQDEIGDLA TAIQSVMQHVREIISDLSDKLSELAKGNFRVSLENTEQYPGAYRPLLNSLQEISNDLNKT MAEIKTSAREVNAGAEQVSSGAQGLSQGATEQASSIEELSATVNDISEHIKKTAENTRLA NTEAQNAGKEVSHSDKQMQQMKAAMENINQKSGEISKIIKTIDDIAFQTNILALNAAIEA ARAGVAGKGFAVVADEVGNLAQKSANAAKDTTMLIEETLQAVEQGTVLADSTAESLQRVV TGASKVTELVNQIAEASVEQSRAVEQVSTGIDQISSVVQSNTATAEESAAASEELSGQAN ILNELVGRFQLKED >gi|333758476|gb|AFIH01000001.1| GENE 1977 2011296 - 2011655 322 119 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227872260|ref|ZP_03990619.1| ## NR: gi|227872260|ref|ZP_03990619.1| hypothetical protein HMPREF6123_0558 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_0558 [Oribacterium sinus F0268] # 1 118 24 141 151 114 50.0 3e-24 MLSVSFDLVKKACMEKAGLKTMSCTIEKLNAETNFPQVFRLKSNGQEYTLQIYSEEVEEL STILSYALFSDSGEMLCTARTEFYSPEYPFAEAPYTHLIPETSSCALCKKKLSGECEGR >gi|333758476|gb|AFIH01000001.1| GENE 1978 2011661 - 2012650 909 329 aa, chain - ## HITS:1 COG:BH2227 KEGG:ns NR:ns ## COG: BH2227 COG1609 # Protein_GI_number: 15614790 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus halodurans # 1 328 1 336 347 220 38.0 4e-57 MATIKDIAERAGVSPATVSRVLNHDETLNVQESTRKRVMEAAEELEYTMPSPRKKSKKLK IGIFGSYSPEEELEDPYYLCIRLAVKKKLEEEQCHMMEISLSDSAEKIAGLDGIICTGTF TNEMLERLSAWNKPIVMIDCNADLEQCDTITVDYKNAVRDLLDFLIEKGHRKIGFIGGGA ERWLDRRSEDPRYTEFCAYLKEKNLFCERYVKLGQHEARYGRLLFTELYREGNLPTAIFA ANDSIAAGIYRAAYEIGLKIPEDISVIGFNDIPGAKYMVPPLTTVRLYMEFMGEYAVTLL SERIQESREINIKIMVPTKLRVRNSVREL >gi|333758476|gb|AFIH01000001.1| GENE 1979 2012668 - 2013540 656 290 aa, chain - ## HITS:1 COG:AF0788 KEGG:ns NR:ns ## COG: AF0788 COG0697 # Protein_GI_number: 11498394 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Archaeoglobus fulgidus # 1 277 38 303 308 132 36.0 5e-31 MKKILGILGLVTVTIIWGGGFVASDIALQTLAPFQIMFLRFLIGAFCMGMLARKEIKTIT KDEILCGFLLGSALFSGFALQIVGLQYTTASKNAFLTATNVVMVPFIAFLLERKKVELKS VAGAILALTGAGILSLQSGFSIGLGDSLTLGCAIGFAFQIYLTGKYVHRIRPAILNFMQM LSACILSFIGLLFSGRIAFEGVSSSGWLAMLYLGVVSTTVCYFLQTWAQKYVDETKSAII LSLEAVFGTVFSVILLQEEVTSRMILGSVTILLAVMISEVSFKKKESSSV >gi|333758476|gb|AFIH01000001.1| GENE 1980 2013598 - 2014893 1430 431 aa, chain - ## HITS:1 COG:mlr6435 KEGG:ns NR:ns ## COG: mlr6435 COG1653 # Protein_GI_number: 13475383 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Mesorhizobium loti # 13 373 5 361 423 173 30.0 5e-43 MKKTMKKIVSGGLSLLALSSLFLSACGNGGSGKQGGKTTLTVWAWDVALKQLEEAGKVYQ ESHPDVELKFEEMGTDQIYKKLSTSLATGNGIADIICIEGEYLVGYADKFPEGFLDLSDI VEEKDFLPSKISEVKYNDKIQAFPWDAGPEALFYRTDYFEEAGVDAASLKTWEDLIEAGK KIEATCKTPSGDPVKMLPMDPRKTNFYTLMRSQLGKGAFDENGNPIVNSAESIQAMKEAA KVYESGVCLNYNGWDEYEQTVVNQSVACIPEAVWMIGTIKDKGPDTKGKWSVVDLPMISG GQYSCNNGGSDIVINAKTKSPDIAKDFLKFAMTDTKLQASGFENFGLYPSYIPSYEEEVF SKGDPFFGSTNVYTVFIENGKKVADIATSPNSLEANDSISAAVSKIFLNKEDVEKTMNDL QAELEGKFAKK >gi|333758476|gb|AFIH01000001.1| GENE 1981 2015095 - 2015916 859 273 aa, chain - ## HITS:1 COG:BH1926 KEGG:ns NR:ns ## COG: BH1926 COG0395 # Protein_GI_number: 15614489 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Bacillus halodurans # 3 272 15 284 285 190 40.0 3e-48 MKSIGKILSYMILILAAFVSLFPFYFMFVSGTNTNTEILSVPPKLSIGTALLDNFAILQD KMNIAMSIFNSVFISVVYTLLAVLLFSAAGYALAKYEFKGKNLIFAFIMGSMMIPAVVMY VPLFEMMIKVQMTDTYSSVILPMLANAFGIFLMRQNMLEFPTALIEAGRIDGLSETSIFF RIVLPNVKPAIGALVIYMFTSMWNNFMWPLIVLGSEEKYTLPIALAMLDGNPTNKNYAVI LLAASIATIPILLIFMVFQKQFVQGVMGGAVKE >gi|333758476|gb|AFIH01000001.1| GENE 1982 2015913 - 2016788 965 291 aa, chain - ## HITS:1 COG:mlr6436 KEGG:ns NR:ns ## COG: mlr6436 COG1175 # Protein_GI_number: 13475384 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Mesorhizobium loti # 8 290 3 286 286 238 45.0 8e-63 MSKKTLINRKTAPYVFLAPTILIFLAFMIYPILRSFYLSFFELISGSYQFVGFDNYLSLF RDETFFKSLFNTFIYLIIQVPIMIIGALIIAFLIEEKFIKGRGFFRTAIFLPTVTALVAY SLVFKVLLNGDHGLINYVLESMGFQGINWFYEEWPARYAIIISITWRWLGYNMIILLAGI QAIPKDVMEAAEIDGANFWQKFLYITVPMVKQLILFCTITSTIGTLQLFDEPFILTEGGP NNATITMGQYLYNNGFRYLKFGYASAIGYVMTFIIAGLSAVQFFVTKEEKK >gi|333758476|gb|AFIH01000001.1| GENE 1983 2016781 - 2019963 2557 1060 aa, chain - ## HITS:1 COG:ebgA KEGG:ns NR:ns ## COG: ebgA COG3250 # Protein_GI_number: 16130971 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase/beta-glucuronidase # Organism: Escherichia coli K12 # 35 1047 54 1017 1042 646 36.0 0 MERIKKQWENEELIMIGRKEAVADFHHKAEHEKVLSLNGEWNFLYLKAPEYSPENFYEED FEDREWKRIPVPSCWQFYGYGQKHYTDVWYLFPINPPFVPSDNPSGIYRRSFHLEKKEEG KQYLLRFDGVSSAFDVWVNGKHLGYSKVSRLGSSFDASAFLREGENRICVRVYQWSDGTY LECQDMWWFSGIFREVNLISVPEKGMKDLAVYADYRYESGSGKLQLQVDLGIERSSLQKD GTLEEENGSQEDSSSITILLKDKADTPLFRERVRFAKGEDRRFSVNFVKELETVHPWSAE DPYLYELEIALERDGAIVDAVTMPVGFRSIEVKGENFLVNGKAILLNGVNMHDFSPTGGL TVEKEEVKQDLLRMKRCNINAIRCSHYPKASWFYSLCDQYGFYVIDEADLETHGFEWIER YEWLNDLPSWEAAFCDRAIRMVKEHRNHPSIIMWSLGNESSTGQNFVKMAGAIRALDQSR LIHYESDANADIADVYSTMYTRLDGMVRIAEGNDAHGKPHILCEYGHSMGNGPGNLREYQ DLFEKYPRLQGGFIWEWYDHGLKEVGKEGQTIYCYGGDYGDKPNNENFCIDGLLRPDKVM SSGLLNYKQVIAPLVLEMFNAAEGEFALRSKRYFRDSSDMVLEYRIWSGERTLLSGSLTE LVVDAQSSTSFRISEIPELLKQQENKGFEKDAIYIDFRILYREENAFAKKGEELSAQQFV LREEGYCSPKTCLEMETSEEKTAFPASDGERADSAEIHVEESNTTLSFSNNHFAICFNKV SGKLEKLSYSGEDYITSGPVLNMLRANIDNDMYKVKDWNEKYFIYKQQEQLEGISYQEEP FGYSVLVNTHFSALSMAFGFKGEYSYKIYRDGTVELELSMKGFRYSSFAPEFIPRIGVEL SVPGKLSEVSWYGLGPEENYPDVQEHTRIGIYKKQIEEMHENYVMPQENGHREGTQWITL GNSEGSLQIVSTNPIGFDAHHYTIEALEEAKHLGEIRKSEDIILHLDAKHSGVGSNSCGE EQIYRNKTRFNDYRLQLLFQKIEQKEAFSAYRRARERSYE >gi|333758476|gb|AFIH01000001.1| GENE 1984 2020159 - 2021031 603 290 aa, chain - ## HITS:1 COG:SP1376 KEGG:ns NR:ns ## COG: SP1376 COG0169 # Protein_GI_number: 15901230 # Func_class: E Amino acid transport and metabolism # Function: Shikimate 5-dehydrogenase # Organism: Streptococcus pneumoniae TIGR4 # 5 288 2 284 284 238 42.0 1e-62 MNQWEIDGKTRLYGLLGSPVSHSLSPFIHNEGFRRISLNARYLAFRVGEKELEGTLSALR KMQVGGLNLTMPLKEAVLPLCDSLSKEARLSSSVNTLIFSENGEMTGSSTDGIGFFRALE AENGSTEGKRLCLMGLGGAGKAVLSRAVYTEVSEIRLLQRASSIEKNRAFIEKVEQETGK RILLGSYEENLAEFLEESDILVNSTNVGMGEKLSLIPDAKLLHKGLFVADCIYHPLETKL LSQAKNKGLRYMNGLPMLFYQAAESFRLWTGQVFPEEEVLEALRGKIEKK >gi|333758476|gb|AFIH01000001.1| GENE 1985 2021111 - 2021785 577 224 aa, chain - ## HITS:1 COG:FN2084 KEGG:ns NR:ns ## COG: FN2084 COG3619 # Protein_GI_number: 19705374 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Fusobacterium nucleatum # 11 222 20 234 239 142 38.0 4e-34 MKSEGNYRVVEKLWFFALLMFAGGFYGGYTFSLRGKVFANAQTANLVMMMLSFGNGDWKK GLYAFVPLTAYIVGVCMAEFVSGKMNQKNKSLFEEKLLLFEAFVSFAIGLMPSSVPDHVP QVALSFICAMQFTAFRQAEGVNMATTFCTAHVRQLGVNLVKTVRDKNENAAVLFRGHAIM LLSFCAGAFMAVFLSHIFSFYCIWLVSALHLFLFYHTRRENKEG >gi|333758476|gb|AFIH01000001.1| GENE 1986 2021801 - 2022541 627 246 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 [Bacillus selenitireducens MLS10] # 10 244 11 246 255 246 50 4e-63 MREEGYTLVGRNPVMEAFRAKKTIDRLFVQEGLKDGPILSILREAKKQDTVVDFVKKSRL DEISAGELHQGVIAYLAAFSYAELPELLSVAREKGEAPFFFLLDGIEDPHNLGAMIRTAN LCGAHGVIIPKRRAVGLTATVARSSAGALNYTKVCKVTNLVQTMEELKKEGMWFVCADMA GESMYKLNLKGPIGLVMGNEGEGVSRLVKENCDMQASIPMKGDIDSLNVSVACGVLAYEI VRQRMG >gi|333758476|gb|AFIH01000001.1| GENE 1987 2022538 - 2022957 201 139 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764762|ref|ZP_02171816.1| ribosomal protein S13 [Bacillus selenitireducens MLS10] # 12 137 12 137 141 82 35 1e-13 MAEDLKDSLALQIPPLSLAYVGDSIYDFFVRDRLIRDLSGSLNKINSKKKDLVCAKAQSD VMEYYLANELLTEEELAVYRRARNHKSQSRSKNSGIGDYRRATGFEAVLGYLHYQNKEER LKALMEAGLSFLLEREEGK >gi|333758476|gb|AFIH01000001.1| GENE 1988 2022942 - 2024360 1415 472 aa, chain - ## HITS:1 COG:CAC3177 KEGG:ns NR:ns ## COG: CAC3177 COG0215 # Protein_GI_number: 15896425 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Cysteinyl-tRNA synthetase # Organism: Clostridium acetobutylicum # 1 472 1 462 464 471 50.0 1e-133 MKIYNTMSKEKEEFVPIEEGKIRMYVCGPTVYNLIHIGNARPMIVFDTFRRFMEYKGYQV KYVSNYTDVDDKIIKAAVEEGVDCQTITKRYIAEVEKDMADLNIEAASAHPKATEEIGGM VSLIEDLQKKGFAYAVDGTVYYDTTAFKPYGKLSHKNMEDLQSGLRELKVSGEEEKKSPT DFVLWKPKKMGEPYWNSPWSEGRPGWHTECCVMAPKYCGGALDIHAGGEDLIFPHHENEI AQYEAAHGEQFARYWMHNAFINIDNKKMSKSLGNFFTVRDVTSQFDPMVLRFYMLSAHYR SPLNFSKELMQSAKASLDRILSCIWRLEDLLPRLKEKGMSKEEEESLKKVEEYTALFSEK MEDDLNTADAITQIFELVRLANSTVNEESSKDFGSIMKESIAALVHVLGIRTEKKEEKLD ERLEEKVNALIAKRQEAKKNKDFTEADRIRDELLEMGIALKDTRNGVEWQKI >gi|333758476|gb|AFIH01000001.1| GENE 1989 2024520 - 2025932 1664 470 aa, chain - ## HITS:1 COG:CAC2433 KEGG:ns NR:ns ## COG: CAC2433 COG0265 # Protein_GI_number: 15895698 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Clostridium acetobutylicum # 68 393 111 422 433 166 36.0 8e-41 MKKIIGVILSALLFGLVAGGMMVGVNYIAQERNIYSILRDSGVENPEAMLSSPSVIPETE KSTQASENTVTASSNGSEKTVTEVAKEAMPSVVAITNMMRYQQNGFSIFGEVQKETELPA SGSGVIVGQNDTELLIATNNHVIQDSNSLTVSFIDESTANAQVKGTDATVDLALVSVKLS DISPETREKIKAIKVGSSDDMEVGDPVVAIGNALGYGQSVTSGIISAKNRDVQTKEGVSK GLIQTDAAINPGNSGGALLNMQGELIGINVAKYADTDVEGMGYSIPSSAAEGILSSLSNL TTRDKVPEGEQGVLGVQVKDIDAQTAESFAMPKGIYIFKVLEDTGAENSAIQERDIITKL DGQGVYTTADLKSLLSKYRAGEEVKLTLMRQDGSGKYNEMEVKVVLGKASALSGNTGNNG NSGNAPSQNGGQGNQNTPEETEPSTENGNGSTGEENPFKSFQDFFNEYKR >gi|333758476|gb|AFIH01000001.1| GENE 1990 2026014 - 2026493 625 159 aa, chain - ## HITS:1 COG:CAC0434 KEGG:ns NR:ns ## COG: CAC0434 COG0245 # Protein_GI_number: 15893725 # Func_class: I Lipid transport and metabolism # Function: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase # Organism: Clostridium acetobutylicum # 1 154 1 154 155 178 57.0 4e-45 MRVGLGYDVHRLVEGRDLILGGVKIPHEKGLLGHSDADVLLHALTDALLGAAALGDIGRH FPDTDERYRGISSLILLEKAYALVKGQGYSLGNADMVLLMQKPKVKDFIPLMEENIAKAL SCERERISVKATTEEGLGFTGQEEGIAAKAIVLLEKLAD >gi|333758476|gb|AFIH01000001.1| GENE 1991 2026565 - 2027533 654 322 aa, chain - ## HITS:1 COG:BS_ytlR KEGG:ns NR:ns ## COG: BS_ytlR COG1597 # Protein_GI_number: 16080046 # Func_class: I Lipid transport and metabolism; R General function prediction only # Function: Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase # Organism: Bacillus subtilis # 3 321 5 308 309 99 28.0 1e-20 MLFFIVNPLAQRGQGLKTWKKLEEDGRAFLEKEGFRLFFTKAKGDAKSIAGEITKDSREE KKIVVVGGTGTLNEVVDGLKLDNDRVSLAFFPVCKENDFVRGLEKCYKVPGSIEELLQKK ERRVDYGIVESMRKHRRFVVSVGVGFDAMVLNELFTMRYDICPKEKRRIAKENRGLVSSI CNHSGTLSYIYAFLKGIVGAKKCRGTIVLDGEERIEFNHILFLSVHNHPYEGHYAFGKGA SGEDGFLDLCLVSTTHKLRLLRFMLAALFGVHRSLPGVHCYRFKKAEIHMEEGLLCHVDG ETVGKKQDLSISCRPRKLRIQI >gi|333758476|gb|AFIH01000001.1| GENE 1992 2027617 - 2029056 1470 479 aa, chain - ## HITS:1 COG:all2500 KEGG:ns NR:ns ## COG: all2500 COG0793 # Protein_GI_number: 17229992 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protease # Organism: Nostoc sp. PCC 7120 # 103 472 71 413 428 181 32.0 4e-45 MGEEEKEYPSEIELKEDTKKEVNLSMERSRKNGKTALFVLVLFAMLFSFALGGAACYVYY FSYPGLQFLKRETQGTQKEEINLARVSKKLGELQDLIQKYYLYTENGINAENDIYKGLLN SLLEDDPYAAYYTKEEIDETINQQKGVYQGIGATVSESEEGPKVEFVYPDSPAEKGGLQA GDVILRVDGISVKDLSLTYIVENLVKGVEGSSLEMIVKRNGEELTLRITRGKVVIPAVEY GDPAEMLKDDSLPKGKIGYLSLRGFYMEAVDEFISEYEEKIDGKDEALIIDLRGNPGGDV EAATKLLDYFLPDHLSKPEKKATEESGAIQSKTDREFKSGDTLLLYTEDKNGNGKDWYCE DGHEVDMPIVILVNQNSASASELFSGAMQDYGRAIVVGTQSFGKGIVQTVRSFPDGSAVE FTTHYYFTPAGRNIHKVGITPDIKVEIPEADSNSYVQDRAKDSQLKKAAETLYTNFIHG >gi|333758476|gb|AFIH01000001.1| GENE 1993 2029083 - 2030171 1385 362 aa, chain - ## HITS:1 COG:CAC3236 KEGG:ns NR:ns ## COG: CAC3236 COG2508 # Protein_GI_number: 15896482 # Func_class: T Signal transduction mechanisms; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Regulator of polyketide synthase expression # Organism: Clostridium acetobutylicum # 169 355 134 312 312 94 33.0 4e-19 MISNQVLQSTIDSIKGIARLDIAIADIDGKVLATTFVEDRDLSGMVVSFAESQADSQAAG GFQFFKIFDEHQLEFVLIAHGDTDDVYMVGKLAVLQVQTLLVAYREKFDKDNFVKNLLLD NLLLVDIYNRAKKLHIEVGVRRVVFLVESDETIDVQAQDALKEFFSSESNDFVTAVDEKN IIVVKELQPEDGYEEVQKIAASMLDMLSSEVMLSTRVAYGTIVNEIKEVSRSYKEAKMAL EVGKIFFVDRKIVAYNALGIGRLIYQLPIPLCKMFIKEIFVDVSPDDFDEETLETISKFF ENNLNVSETSRQLFIHRNTLVYRLDKLDRATGLDLRVFDDAITFQIALMVVKYMKYMEHL DF >gi|333758476|gb|AFIH01000001.1| GENE 1994 2030433 - 2031545 1319 370 aa, chain - ## HITS:1 COG:CAC3237 KEGG:ns NR:ns ## COG: CAC3237 COG3839 # Protein_GI_number: 15896483 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Clostridium acetobutylicum # 1 368 1 368 369 484 64.0 1e-136 MASVQLKNVVKKYPNGFVAVKDFNLEIEDKEFIIFVGPSGCGKSTTLRMVAGLEDISTGE LFIDGKKMNDVEPKDRDIAMVFQNYALYPHMTVYDNMAFGLKLRKVPKDEIDKKVHEAAR ILDLEHLLDRKPKALSGGQRQRVAMGRAIVRRPKVFLMDEPLSNLDAKLRAQMRVEIAKL HKSLETTIIYVTHDQTEAMTLGTRIVVLKDGIIQQVDTPENLYDTPCNKFVAGFIGSPQM NMIDAECTEEGGQVKLSFAGNTITLNEKKAAALKDKGYIGKTVTLGIRPEDLHDEEDYLA NHSKSLITAEIRVYEMLGAETLLYFDIADASWTARVNPKTKARTGDTVRFALDENKIHIF DKETEITITN >gi|333758476|gb|AFIH01000001.1| GENE 1995 2031848 - 2032513 637 221 aa, chain - ## HITS:1 COG:CAC1635 KEGG:ns NR:ns ## COG: CAC1635 COG2996 # Protein_GI_number: 15894913 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 1 133 1 137 282 106 43.0 3e-23 MLKLGKSQKCKILREKDFGVFVGNEGEEGVLLPIRQVPKGKKVGDEITVFVYKDSRDRLI ATTRKPYMEVGEIAKLRVNDVNAIGAFMDIGLEKDILLPHREMRYALKKDMEVEVYLYID KTERLAASMYTKKKEDARHISQEEVNTSRYEKCAEQIEHILEEKFAGHIPYTDKTVDPEQ VKKDFGVSKAAFKKAIGKLLKEKKIKITKTAIFKLYHEEEE >gi|333758476|gb|AFIH01000001.1| GENE 1996 2032482 - 2033249 361 255 aa, chain - ## HITS:1 COG:CAC3591 KEGG:ns NR:ns ## COG: CAC3591 COG3884 # Protein_GI_number: 15896825 # Func_class: I Lipid transport and metabolism # Function: Acyl-ACP thioesterase # Organism: Clostridium acetobutylicum # 12 176 16 178 248 105 33.0 8e-23 MYEIKERVRYSEVRENGKMGLLGIVNLLQDCSTFHSHDVGMSIERVLELKRAWLLSAWDI QVFSFPALYEEITVGTSPHLFRGIFAYRNFWIRNKEGEYLVKADSEWFCIDTEKGRPQKI TEELVEPFGKPQDVLQLPPLQRKITFPEEWQAGQDFPVPREYLDTNHHMNNARYIALSEE LLFQSSGRPAFSFSEENKKERMEPFGIRAEYLKAYTLGDSIFPRLAIEEDRKVVAFYNQN KELCCHVEIRKIPKM >gi|333758476|gb|AFIH01000001.1| GENE 1997 2033266 - 2034387 918 373 aa, chain - ## HITS:1 COG:CAC0606 KEGG:ns NR:ns ## COG: CAC0606 COG0053 # Protein_GI_number: 15893895 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted Co/Zn/Cd cation transporters # Organism: Clostridium acetobutylicum # 6 368 32 398 403 213 32.0 4e-55 MKETERERIATRAAAFGILANLFLFVVKYLLSASLHSLSIAADAWNNLSDVGNSILGLVA GKLSGKKADREHPFGHGRIEYLAAFLVSTFIIQLGLGTIRSGLFSLGKKEELVFFAPAVW LLVLSVLIKLLLFFYFRFIGKKISSTLFKATAMDALLDSLMTVSTLVSVLLYYKKGYNID AFLGLGLGALILFNGIKMARETITEILGKPIEEKIYKEIRDTVLEEKDFLAVHDFLYHPY GAQNAMGSIHVLCDGRKSIAYIHEKVDDMERRIKKEFGFSLLIHVDPIVAEEDVVWLSSI VKRTLARYHTEGSFHDIQFKKEKEKGILYFDLLLPYSVTEETATKIQAEITDMVKEEKGM DCVIELDRPMIET >gi|333758476|gb|AFIH01000001.1| GENE 1998 2034482 - 2034934 532 150 aa, chain - ## HITS:1 COG:BMEI1605 KEGG:ns NR:ns ## COG: BMEI1605 COG1970 # Protein_GI_number: 17987888 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Large-conductance mechanosensitive channel # Organism: Brucella melitensis # 5 120 8 128 144 134 58.0 5e-32 MKGFLKEFKEFALKGNMIDLAVGMIIGSAFTALVNKLVSDLVMPLISLVTGKIDFDNMFI PLAGQTTKVYSEAVEQGAVFAYGSFITAVINFLIMALVVFIFVKQMNKLKKEAPAVETEK ECPYCKTMIPIEATRCPHCTSKLAGYAESV >gi|333758476|gb|AFIH01000001.1| GENE 1999 2035059 - 2036219 1239 386 aa, chain - ## HITS:1 COG:SA0656 KEGG:ns NR:ns ## COG: SA0656 COG1820 # Protein_GI_number: 15926378 # Func_class: G Carbohydrate transport and metabolism # Function: N-acetylglucosamine-6-phosphate deacetylase # Organism: Staphylococcus aureus N315 # 9 382 10 389 393 229 36.0 8e-60 MDEDRKKYKIFAEDKKFYLGRIAVSDGRFSSVDLERELSDGELFSGEEDFLLPGLIDIHF HGCLGKDFCDGTREAVSTLAKYEAEHGITGICPATLTLPVEELEKVLGLARTYRDEGLKI GEARLLGINMEGPFISPVKKGAQNPNYILKWDDRIANRFLEVSGGLVKYMGIAPEENPAF KDFIPKMQGKVRISLAHTNADFQTAVEAYRAGASHAVHLFNAMTGLDHRNPGVVGATMEQ KEVFAELIADGVHVHPMMVRLAFTVLGEDRVILISDSLRSTGMPDGLYDLGGQEVEKKGK HCRLTSNGALAGSVSNVYDCLCTAVKEMGIPLRKAVTAASLNPARSLGVDQDYGSITVGK VADYLIVDKDLKQKAVYQAGKILPIF >gi|333758476|gb|AFIH01000001.1| GENE 2000 2036438 - 2042599 5656 2053 aa, chain - ## HITS:1 COG:no KEGG:Shel_00090 NR:ns ## KEGG: Shel_00090 # Name: not_defined # Def: Mg-chelatase subunit ChlD # Organism: S.heliotrinireducens # Pathway: not_defined # 1487 1877 1531 1890 2281 136 31.0 1e-29 MLKFSGNGVGKRVLSAFLCAVLSFSNVQIAYAGEGTEEILREGTFFAPESNPQQEGIEGE ASEGTEAELAEKEEREGISKESPSNLRDKTTENTETENAKEDTAFLAAGEFEETTEEGIA VRAKYGENTFPEGTFMRLRPVEEEETLSAMKEKVLSEKEKGELSGQEVELRSFYAVDIGF FRVTEEGEEVAVQPKKGKAVQIELKKSPALEEALSIQPGTWVEEYVDEEEIRKEKTLFQK DEYTVSLPEGEELSLVHLPEGKEAELLPLTDSDSTLRFSGKEFSPYGLAGTGRGKSVGQA SNHSFQVYWKEAPDPQAGTENATTGHSYSDPLAATNIRERKNLQIIPPAKSSNQLDTSTM MLEFTLKGNKDTKYPPGSISIDIPESVFKSWSTTHPTLVAYKDRYNLQDGMEPVQSQVPK APETNSLSDFNYTEVERPINGKKEKYYHLVNHSEVPGAMILEAEFAYPMRPTMVQMEHKQ VGGKEIGEYRNAFPVFAEIHHPDSQYNASMQDNLSVTLQTEVKPFKMTIKHGTGGKTGGL FYKWDPAWGDKPADADSYFYVPWYIDADRPGGSSQGFTYSFHLDNNTADGGQLVGVKKMP QSVWWNRYTYASYLDSDTSSGSYPDIARYMHSAPPQDQYWLVNPIGRTFVGINKEPVKRP GDPSDDTFENSDGSYYDYDGYPLQYYQGGQRYVALYRYPMTKITDAIAAHMDMVEHGFLL KNKVSWTETWADGYTRNGSSEATLENQAKVILPLRPKGKVQMDKNNTGDGWIFTDSLQTL FADGAQNIPISGNARTSPMYYLFASNQVDGSKVVMHADGTYTVPETKIVLRDDGEYYLYT LKNNVWMTEPLNTDPTTAINLETGFREPGTAVYKLKEEDYYYDSVSIKNMEVYDVEQVSA PVNYTPTGRISRNFASYAPVELWIRKKGHTSYEKYGSFQAIDKDQFTFTPESGYSKVTAQ QGNNIITSANYLDLKAAFPGGVSGIEFRNTTKAYQTNLQPAFGISLTPSAAMREQYQKAL NAGLNSAVAGPGYGKADTGADSLAGRLGKQWDRVAYVHRPMQLTSSINKYLDNITYSDGF VRGFKDDPVHGEQLHLCYVDIHNQVALPEPLRKEEYLSPYLLRDGIIYDLLPAGTYVKEE EIHLGPNGQGGAYGGDFDRGDYQVEFIDNWEDSGQTMMKVSFKTPAGRKNISGGNASRIR LGYIVHNPYSNILDRGRILQNTAAFLNTSKDTKWIPNFSPKDEANGIPERHSGRLKEPYF QKEMENAWNADPSHYKTMSVTDMPLNYEAITIVQAGFSNYVSTEVHKPFAKDNVSYMGDP YRHRLLYQALSSTRTTDIILFDILGEEQDRNGDFDGIDISSFLNKKPFEKGLTTENPDVL EPVVYYSTVVPTTEEQRSLGAPKYDTAAYNSDNSVYNPKNPNSIWKVWDYKHPENNAGVN KKDIKAIAVDARTTKAGKRFILDTQGKLVAYVKMTASMDKKKLPVHNVNTGYLTSITFNG EDVPASEVIKELEAPSSHNLIAPVQVSIPVKKVLDGPAGVTAPNIQNAFRFTLKAEAGAS LLDGNRQPVVTEKTNPDADGGLLEFGPIEFIRPGTYTYTVTETGNFPRIKNDLLSEKTLT VTVTNPDDKKLSYTSTVNATTPLTFTNTFGIDKVKPKISIKKVLEHYGGVTVPDIKEKYS FTLAALDGAPMPAEATGGSLTKTNPDADGGEISFGEITYSLPGEYRYTVTESGSVPLVEN DKEAVKNLIVKVKDLGNGTMSATVSGDALEFRNLLSLPPAEEELSLKKEVKGGSPENKDP FRFSLSWKKTELTAVGNAGVKLPANPAPMPGNSPGQEVQITVNGAGTGTFEKIAFHAPGK YTYEVREEALLKGYRFDKSRYQVVFTVEEDPANPSHLTVKKEIFKDDVPAEQILFVNEYE PNQPGPNPPTPPTPPDPSLPPNDKPTPPGPPTPPTPTETPEIPPEPNRPSTPRPKTLREI NSRIKAILGRKRPLTQEDREELEQLIKVVSKYKRRVQTSDSSKSILYVIFSGISGILLAL YMALKRRWGKIRL >gi|333758476|gb|AFIH01000001.1| GENE 2001 2042823 - 2044229 846 468 aa, chain - ## HITS:1 COG:CAC0906 KEGG:ns NR:ns ## COG: CAC0906 COG2872 # Protein_GI_number: 15894193 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain # Organism: Clostridium acetobutylicum # 49 327 33 264 387 122 30.0 2e-27 MFKNALYYQEEKESYKAKVLSCLPLEGKEKATWEKRVGKSFPALFLLRLSEEPFYPEGGG QAPDKGTIDGAELLFAENVEDEYIVHLLPTALPVGKEVLCKVDYAYRRRQSENHSGEHIF AGLINRRFGYSNVGFHMELLGENPHVTVDFDGELSEEALSELETAVNAVIRQNLPVEEKY LEDDFGKENLKCLPDAEDGEKSEELETSVEQLSVEEPGEVLEQGQKTMEFRQKKALSGAI RVISIPAVDSCACCGTHVKRTGEIGLFKVLFFEKHRGGTRVFLLSGELAFLDTQKKEKVL LEVSRKLSTDYQNLSERMGKLKEQTEEERGRRIALSLQAVEMLGNSYRKELLIQQEKAVL TGKSLRGEGLEYYGNKNLAVFHFPDFEMILLNKACESLKAYVQTDFFCFSRRGEKEWQFA GTGCSGFLERFKKWKDTGHFSGGGREEMLQGRFLGTEEELKAWVDRAE >gi|333758476|gb|AFIH01000001.1| GENE 2002 2044317 - 2045777 1153 486 aa, chain - ## HITS:1 COG:SP2107 KEGG:ns NR:ns ## COG: SP2107 COG1640 # Protein_GI_number: 15901922 # Func_class: G Carbohydrate transport and metabolism # Function: 4-alpha-glucanotransferase # Organism: Streptococcus pneumoniae TIGR4 # 1 479 10 490 505 412 46.0 1e-115 MPLFSLPGKYGIGSFSKEAREFVRFLKEAGQSYWQILPMGPTGYGDSPYQSFSTFAGNPY FIDLDTLAEEGLLLEEELSDLSFSDSEEHVDYGKLYSIRFTVLEKAVKRFLEKLDLDTAS SGSAEHGEAKKYSKENCEKEKEAYSAFLSENAHWLPSYAEFMAKKLPYSADFHKVCQYFF IKQWKSLKDYANSLGIKIIGDIPIYVSLDSSDVLDHPSLFQLKENGEPSAVAGCPPDAFA ENGQLWGNPLYAWEKHEEEGYSWWISRIRHCFSLYDIVRIDHFRGFDEYFSIPYGDENAK RGHWEVGPGMKLFRAVEQALGKKEVIAEDLGYVTESVKKLVSDSGFPGMKLLEFAFDSRE SGDYRPNTWTKNTVCYTGTHDNQVLKDWFLEILPEDREMAAEYSGKSVEELLEMDYVDFF IKMTLDSVSNTAIIPMQDYLHKGKEARINTPSKLGNNWSYRFSKKDFSGDMAEKIRKMTE ESGRLS >gi|333758476|gb|AFIH01000001.1| GENE 2003 2045946 - 2046377 497 143 aa, chain - ## HITS:1 COG:CAC2653 KEGG:ns NR:ns ## COG: CAC2653 COG1781 # Protein_GI_number: 15895911 # Func_class: F Nucleotide transport and metabolism # Function: Aspartate carbamoyltransferase, regulatory subunit # Organism: Clostridium acetobutylicum # 1 138 2 139 146 128 48.0 4e-30 MNIDGIENGIVLDHIKAGKSMLVYQYLGLQNLNSPVALIQNCSSGKMGKKDIVKIAENID LDLNVLGYIDPGITVNYIRDGKRVDKACLSLPETLKNVLHCKNPRCITSTEQELPQVFKK IEGKNRQYRCIYCDTIAKNDEFE >gi|333758476|gb|AFIH01000001.1| GENE 2004 2046604 - 2047527 1098 307 aa, chain - ## HITS:1 COG:CAC2654 KEGG:ns NR:ns ## COG: CAC2654 COG0540 # Protein_GI_number: 15895912 # Func_class: F Nucleotide transport and metabolism # Function: Aspartate carbamoyltransferase, catalytic chain # Organism: Clostridium acetobutylicum # 1 305 1 306 307 371 61.0 1e-103 MEKNRSIINILDLSIEEINELMALADKIEAKPEDYWERCKHKKLATLFFEPSTRTRLSFE AAMLELGGSVLGFAGASSSSAAKGESVADTIETVSNYADIITMRHPKEGAPVVAAEHTTV PFINAGDGGHFHPTQTLADLLTIHRTYGRVDNLCIGVCGDLKFGRTVHSLIDAMLRYPNN RYILISPEELRLPEYEIEKLKEAGAEFRETTDLEGAIPELDILYMTRVQRERFFNEEDYL RLKDIYVLTPEKLKNAKESMGILHPLPRVNEISVQVDKDKRAKYFYQTLCGKQMRMALIL KLLGLDK >gi|333758476|gb|AFIH01000001.1| GENE 2005 2047656 - 2048291 758 211 aa, chain - ## HITS:1 COG:BH2532 KEGG:ns NR:ns ## COG: BH2532 COG0461 # Protein_GI_number: 15615095 # Func_class: F Nucleotide transport and metabolism # Function: Orotate phosphoribosyltransferase # Organism: Bacillus halodurans # 3 209 2 208 210 246 57.0 2e-65 MRKEEIAEGLLSIQAVFLRPKDPFTWASGIHSPIYCDNRLTLSFPEVRRKIEAGLAELVK EHFPEAKALFGTSTAGIAHAALTAEILDLPMGYVRGSAKDHGRQNQIEGKLTPGEPVVVV EDLISTGGSVIDCVKVLEENGAKVLGVVSIFTYGMEKGKKRLSEANVVNYSLCDLDSLLP VAVAKGYIEKEEEAKLLHFRDNPSDESWMAK >gi|333758476|gb|AFIH01000001.1| GENE 2006 2048389 - 2049153 721 254 aa, chain - ## HITS:1 COG:SP0701 KEGG:ns NR:ns ## COG: SP0701 COG0284 # Protein_GI_number: 15900600 # Func_class: F Nucleotide transport and metabolism # Function: Orotidine-5'-phosphate decarboxylase # Organism: Streptococcus pneumoniae TIGR4 # 6 245 7 221 233 240 54.0 2e-63 MGKDVMVALDFPSGEKALAFLDLFAKEERKPYVKVGMELFYSEGPEIVRKIKERGHQIFL DLKLHDIPNTVKGGMRSLRDLGVDMTNLHASGGVEMMRQALRGLSFEEGENDASSCKGEK ESCGCGNQKNRPLLIAVTQLTSTDQRCMEEELLIKEELKKVVLHYGQNAKTAGLDGVVCS PWEAREIHEKLGKDFLTITPGVRFKGGDVGDQKRVMSPADAKDAGSDYIVMGRPITQAEN PVEAYREAVRQFCD >gi|333758476|gb|AFIH01000001.1| GENE 2007 2049166 - 2050074 1053 302 aa, chain - ## HITS:1 COG:BH2534 KEGG:ns NR:ns ## COG: BH2534 COG0167 # Protein_GI_number: 15615097 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotate dehydrogenase # Organism: Bacillus halodurans # 1 300 1 299 305 316 54.0 4e-86 MVSIKTTLSGIELDNPIIPASGTFAFGEEFKSLYDLNILGSISFKGTTVEERPGNALPRI AECPGGMLNSVGLQNPGVKKVVEEELPRLGKFFKKPLVANISGFSLEDFAILSEEMDKVE NVGILEVNISCPNVSHGGMAFGTDAKSVEAVCKVVKEKTKKPVYMKLSPNVTDITEMARA AESGGADGLSLINTVLGMRIDIKRRKPVLANKVGGYSGPGIFPIAVRAVYAVHQAVKLPL IGMGGISRAEDVLEMMMAGASAVEVGAENLVNPRVCEEIITELPILCERLGIKDIQEIIG IV >gi|333758476|gb|AFIH01000001.1| GENE 2008 2050068 - 2050790 641 240 aa, chain - ## HITS:1 COG:BS_pyrDII KEGG:ns NR:ns ## COG: BS_pyrDII COG0543 # Protein_GI_number: 16078617 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases # Organism: Bacillus subtilis # 1 238 1 254 256 179 41.0 3e-45 MQECEFKILENKMIAKEVFLMKLDGDCSEFTAPGQFCEIKIPGKYLRRPISVCDVSENTL TLIYKVLGEGTEELSCMEEGEYLSILTGLGNGYSVEDAPKNPVLCGGGVGVPPLYYLCKK LVEAGKHPYVALGFRAKEDVFFEEEFRTLGVPVNVATEDGSHGQKGFVTSLLGNHNYAMV CGPEPMLRAVYEKVEGGQFSFEERMGCGFGACMGCSRKMKSGMKRICKDGPIFAWEEIEW >gi|333758476|gb|AFIH01000001.1| GENE 2009 2050920 - 2052308 1080 462 aa, chain - ## HITS:1 COG:FN0420 KEGG:ns NR:ns ## COG: FN0420 COG0044 # Protein_GI_number: 19703762 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase and related cyclic amidohydrolases # Organism: Fusobacterium nucleatum # 4 453 1 417 425 340 42.0 3e-93 MSKVFLKNGYVYTKEGIGKADVLLSEDRLFLDFSENDLENTTVYNLEGKLIVPGFVDVHV HLREPGFLYKETVESGTRAAAHGGYTAICAMPNLNPPPSSVENLSVELQAIEKDALIKVY PYGTITREQKGRGVLSDMEEIAEDVIAFSDDGKGMQEEALMREAMQKAHALGKAIVAHCE DESELKPGGCIHDGDFAKAHGYIGINSESEWKQVERDLRLSEETGAQYHICHISTKESVE LLRKAKERGVKATGETGPHYLMFTDMDLEEDGSWKMNPPIRAAADREALIRGIQDGTIDC LITDHAPHSAEEKSRGLSQSSFGIVGLETAFPAMLHNMVLRNPLDREEARVDRRKAKAKV SEILSEGGKTVHGAISLYRLLELMCTKPREIFPICGPKYIENGAEADIAILDLDAVYKVD VESFYTKGRSTLFSGQEVQGRVLKTFYQGREVYDSEKGILKA >gi|333758476|gb|AFIH01000001.1| GENE 2010 2052538 - 2052807 303 89 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227873453|ref|ZP_03991707.1| ## NR: gi|227873453|ref|ZP_03991707.1| conserved hypothetical protein [Oribacterium sinus F0268] conserved hypothetical protein [Oribacterium sinus F0268] # 1 89 1 89 89 145 84.0 1e-33 MTYYYPAIIRKKEEGYRVDVIDLEGCFGEGKDKQDALEDARHAGVNWLLVESEDSMNFPK QTHLDDIKLKDGEEKTMLAFLMPKEGWDE >gi|333758476|gb|AFIH01000001.1| GENE 2011 2052866 - 2053774 523 302 aa, chain - ## HITS:1 COG:BH1906 KEGG:ns NR:ns ## COG: BH1906 COG2207 # Protein_GI_number: 15614469 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Bacillus halodurans # 26 298 30 287 299 92 25.0 9e-19 MKTEQNTTSSISLPVLYSSLSGKRERLAVEATWHDYDELIYFQEGEFQLYLNLKEKLIKE ESLYFIPRGCFHRLYATSDKAVQHSLCFRLEDFSFAEGDFLEQDFFGPLRNGSRFFPEDI SLNDMGFIEAVQSFSRLVQYFHKHGTNDKSIEASKKYGLRGLAQHMYVRAEMLHLFATLE SMGLIRDKSPLEEERKSELLKNCILFMEEHYRERLYIHDLSSRCQLNEQYFTRFFGNHVG IPPLEYLNRYRVKMATELMVHTEEKIIDIAKNTGFHNQGNFIKTFKAIMGETPNQYRKRM QE >gi|333758476|gb|AFIH01000001.1| GENE 2012 2054032 - 2056254 2180 740 aa, chain - ## HITS:1 COG:CAC0120 KEGG:ns NR:ns ## COG: CAC0120 COG0840 # Protein_GI_number: 15893416 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Clostridium acetobutylicum # 353 737 178 515 555 205 37.0 3e-52 MNKGVERKKKPAGPKKAGLFHSLRLSSKMSILLGLCSAIALIGSGSILIDISKRSMEKSI DSNMVDKTHMAINDIQNILYQNQVVAETIKEGISSAYETEEEVGAAPTKIWNVVDGKGDP VSAKAMGPATFQSRIRNVAIPANLYNAESSMLDALYAAVNSDDSIFGVGIYFDKDAFIPG VDDYSLYLTKENAKTRTIQTYSAGYQEEEDFKHLKETKKLSVSGIYQDAYTKDWVFSIMV PIVIKEEFKGYVLVDMKMDVFELLQQKDERFPSLAIDLADNEGNIAYSMDADTIAKPLKE IMPEEAYNALETKKEEGKSFTTVTSSADKGNVKRYIAPVEVGDSDWWVTVSLSEAEYNAT LMTLVKTALLSNILGVLILVCLTHFLIRTSLAPLKKISSAGVEVAKGNFDVDIQYNKKDE IGELAESMREIMQRIRAIISDLQNKLSELSKGNYRVDMEDQEYYAGAYAPLLQSLRDIRG DLSDTMKEIKNSAEQVKAGSEQVSNAAQSLSEGATEQASSIEELSATMVDISHKIDSTLK ITEEVATLSNDAEKAVNVSTDKMDEMAKAMQDITVKSQEISKIIKTIDDIAFQTNILSLN AAIEAARAGEAGKGFAVVADEVGNLAQKSAKAAQNTSSLIAEAIDAVEKGAKLSGETVQS LEVVSTQSKKINSMIGNISQASDEQAKGVKQVSVGIDQISSVVQNNSATAEESAAASEEL SGQAHTLNELMSKFQLKEEE >gi|333758476|gb|AFIH01000001.1| GENE 2013 2056423 - 2056974 556 183 aa, chain - ## HITS:1 COG:FN2007 KEGG:ns NR:ns ## COG: FN2007 COG0386 # Protein_GI_number: 19705303 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione peroxidase # Organism: Fusobacterium nucleatum # 1 180 17 197 199 196 52.0 2e-50 MNIYDFSVPMVGGGELSLAENKGKVMLIVNTATGCGFTPQYEDLEKLYEEYHEKGLEIID IPCNQFAGQTPGTDEEIHEFCTLTYNTKFPQMKKSDVNGDNALPLYAFLKEQKGFSGFGH SPKGLAMAAMCLTRDVNYKKNPDIKWNFTKFLVDRDGNVVERFEPTADMGEVRKKVAELI HNE >gi|333758476|gb|AFIH01000001.1| GENE 2014 2057298 - 2060030 1080 910 aa, chain - ## HITS:1 COG:SMc02292 KEGG:ns NR:ns ## COG: SMc02292 COG0610 # Protein_GI_number: 15964350 # Func_class: V Defense mechanisms # Function: Type I site-specific restriction-modification system, R (restriction) subunit and related helicases # Organism: Sinorhizobium meliloti # 3 906 156 1060 1065 639 40.0 0 MKIYGELYRRRTDIVGFVNGIPLLFVELKKSTVDVQNAYEDNYTDYQDTIPHLFYYNAFL ILSNGLEARVGTLGSKFEFFHEWKRLTEEDEGSVALETMLRGICKKENFLDLFENFILYD HSDGNTAKILARNHQYLGVNEAMKAYASRKINDGKLGVFWHTQGSGKSYSMLFFAKKVRR KMEGTPTFVILTDRDELNTQISDTFENCGLLGKDIKASKFIASSGEDLIQKLKGNPSFIF TLIQKFNQSNVEPIYPDHDLIIMSDEAHRSQYGIFADNMMKLLPTAARIGFTGTPLLSSD NITARTFGGYVSVYDFKRAVEDGATVPLYYENRGEKILDLHNPEITNQILEAIENADIDV DQQDKLEMEFAKEIHLLTAEPRLRSIARDFVHHYSDLWTSGKAMFVCLNKVTCVRMYNYV REYWKEEIESIKSSLSLATQQERKELERKLKWMQETEMAVVISQEQNEIQTFKKWGLDIK FHREKMEKRELDKEFKDSKSSLRVVFVCAMWLTGFDVKSLSCLYLDKPLKAHTLMQTIAR ANRVSAGKSNGLIIDYIGIVKALRKALADYTANVGGIGGLDPTVDKEQLIHRILETIGKA ELFLSGKGINLTELIHAIDFEKLYYLQKAANAVCDSLEDKKTFTTYASELNRLVRYADRE DLYGYTRKQFEAISAIYGELQKKRKHINTVDLMIQIHNIIDEHIEVEELSGVVCDAYRRF DISAINFDLLRKEFARAQTKNLVMKDLEELIQQRLDGLLFTNPNRVNYYERYQQIIKDYN AEQDRANIEKTFMDLMDLAEQMTKEEQRYAREDFDNDEELSLYDMLFRDNLTKAEIQKLK EVASVLLQKIKSKIAELDHWTDKQETKAEIDNLIRDTLWEKLPECYDELSISEYRQKIYE YFYTRYKTVA >gi|333758476|gb|AFIH01000001.1| GENE 2015 2060093 - 2060440 169 115 aa, chain - ## HITS:1 COG:no KEGG:Fisuc_1347 NR:ns ## KEGG: Fisuc_1347 # Name: not_defined # Def: type I site-specific deoxyribonuclease, HsdR family # Organism: F.succinogenes # Pathway: not_defined # 1 115 1 117 1040 135 61.0 5e-31 MGYDYSENLLVQESAGNLLREELGWDVQFAFEAEKLGKDGSFGRESYKEILLTRYFEEAI RKFNPWIQDAQIVQARDALEQRLSTSSLLQINEEKYFLLRDGIPVTIKNQMDRQK >gi|333758476|gb|AFIH01000001.1| GENE 2016 2060430 - 2062358 599 642 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0868_1059 NR:ns ## KEGG: HMPREF0868_1059 # Name: not_defined # Def: hypothetical protein # Organism: Clostridiales_BVAB3 # Pathway: not_defined # 1 639 1 643 644 384 38.0 1e-105 MSSDYDGVKFYSSHDLSIGWNLEKAEPILHAFFPDKMFDSMNEIIELYNIKELIDLDRPL RRWSTETYKEYKTKVKLFTAIIAKYFSRINNENFIEIVHNVDIHYLKDFWTLFENYKAYE HVEDEIFKEYLLLSKISLLEILKHEKLVKAYNGQLAELLRTSDQTCEILVACYLAEQEDT RYYIPSLLKPEEFELIFQKFIDSVDPSPNTLRLIIHSQSSRECPISDRIKLNAKKKYEEF WSGRDSKVSHVGYKYSISLIEQEEYQKCINDEHGIYISYDRKWLEENLDYPTILNNFFYV FEMFDRCWRSTLPSLKVKIDVLESITANNGKNAYPRGSWYLSRNIIASLQMGMYKALLEE HRINLEDVFVWFFTEYLQNEFNTHGFFMQSSNSSNYAEKCRTLVSEMDGILKQFRMFVQD GVVDRELYEMSSAPLSFESIPSLIGEKYAYACTEDIQQEMNTLFSSQLTYVEKLESKYSS LFEVLTNEKVSVEDFAPFQEPVLKWLIDRGTILLNHDGTISYDRERAFLLRELYEHEVIC IHYLSTTRSALKEMINAGDIRIESTLFSVPEKNYLNFMLNRSQYSDGLDIRNKYAHSTYT INKDVQQMDYIELLKIMVLIVTKINEEFCLREDRLKEESYGL >gi|333758476|gb|AFIH01000001.1| GENE 2017 2062370 - 2063035 175 221 aa, chain - ## HITS:1 COG:MJECL41 KEGG:ns NR:ns ## COG: MJECL41 COG0732 # Protein_GI_number: 10954528 # Func_class: V Defense mechanisms # Function: Restriction endonuclease S subunits # Organism: Methanococcus jannaschii # 1 221 182 429 432 70 25.0 2e-12 MLRPYDNLIKNNQKQIKLLEEAAQRLYKEWFVDLRFPGYEQSKIIEDVPKGWKKMPLSNI APILTGKKDANYGQDNGKYLFFTCAQEPIRSHAYSFDCAAVILAGNGDFNVKLYRGKFEA YQRTYVFSPYNIQNLYLLYYAIRENMHQLILGASGSTIKFLTKQMLEGIKVSIPNKEIMG RFFDYSEGYQRKIENLKQQIWIAQEARDRLLPKLMSGEITI >gi|333758476|gb|AFIH01000001.1| GENE 2018 2063041 - 2063529 186 162 aa, chain - ## HITS:1 COG:SA1625 KEGG:ns NR:ns ## COG: SA1625 COG0732 # Protein_GI_number: 15927381 # Func_class: V Defense mechanisms # Function: Restriction endonuclease S subunits # Organism: Staphylococcus aureus N315 # 3 155 21 170 409 103 37.0 2e-22 MSWDKVRLGDICTKIGSGATPKGGSSVYQKRGISFIRSQNVYNLAFDISGLVFVNEQAAE RLNGVTLEENDVLLNITGDSVARTCMVPKSLLPARVNQHVAIVRPSKEKLDPFFLMYYLA SPFMQSYMLNLAVGKGASRNAMTKEMIENFEIPCPHLDIQKK >gi|333758476|gb|AFIH01000001.1| GENE 2019 2063526 - 2065379 1110 617 aa, chain - ## HITS:1 COG:SMc02296 KEGG:ns NR:ns ## COG: SMc02296 COG0286 # Protein_GI_number: 15964352 # Func_class: V Defense mechanisms # Function: Type I restriction-modification system methyltransferase subunit # Organism: Sinorhizobium meliloti # 3 457 4 447 526 359 41.0 1e-98 MINIRKLESELWESADLLRSGSPLTSNQYCMPVLGLIFLRYAYSRFKLVEAEILKDRPSR GGRVMPVEASDFTAKSALFLPKEAQYDYLLNLPDDISSAELKNKDGHTMRSLGEVVNNAM SLIEEQSEQLVGILPKSYTDFADGILSELLRIFNNSALDEVGGDIIGRIYEYFLNKFAKS IASDDGMFFTPKSLVKMIVNILEPKSGILLDPACGSGGMFIQSGDFVNEAGMNANSTMTF YGQEKTPYNAQLCLMNMAVHGLTGVIKAGESANTFYHDAHNLDGRCDYVMANPPFNVDKV KAESCESAKRLPFGMPGINKDKEVGNANYLWVSYFYSYLKENGRAGFVMASSATDSQGKD KDIREKLIRTGHVDVMVSVGNNFFYTKSLPCSLWFFDKGKTEKTKDKLLFIDARNYYTVV DRTLNEWSEWQLKNLNAIVWLYRGEIEKYIALLNEYYTVLGNEKSFAELIDELTQKIKQC KEEAKKAVENAGRSEKKKKQEEYDDKLSALSDILNVAKEAQWLYEKFGEGKYQDIPGLCK VAYTTEEAKLDSQDSVSIEEKAWSLTPGAYVGVAPIEDDGVNFEERMVEIHRELLSLQAE SNDLMEAISKNMKEMGL >gi|333758476|gb|AFIH01000001.1| GENE 2020 2065372 - 2066244 538 290 aa, chain - ## HITS:1 COG:no KEGG:HS_1527 NR:ns ## KEGG: HS_1527 # Name: not_defined # Def: hypothetical protein # Organism: H.somnus # Pathway: not_defined # 1 277 1 277 288 414 78.0 1e-114 MDNEIKIFEGNRIRSSWDEEREEWYFSIIDILGILTESENPRKYWSVLKVRLKKEGNELA TICSQLKMKASDGKMRQTDVANMQGIFRIIQSVPSPKAEPFKMWLAEVGKERIDEIIDPE LTIDRALETYVQKGYSREWINQRLQAIQVRKELTDAWQDHGVEEGKEYAILTNEISKAWS GMTTREYKDFKGLKKQNLRDNMSSTELILNMLAEAATKDITNATNPYGLEENRQAARDGG KIAGNARKEIEEHTGKAVITSQNAIDFGKLINDVTKELPENRIDRSKRND >gi|333758476|gb|AFIH01000001.1| GENE 2021 2066301 - 2066486 91 61 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLTTAIIYAFSTNLPRKKYIFLHECYLNEISHTLRTILVMNKEVRENSIFHRIGLGNRPE L >gi|333758476|gb|AFIH01000001.1| GENE 2022 2066547 - 2067410 861 287 aa, chain + ## HITS:1 COG:CAC0307 KEGG:ns NR:ns ## COG: CAC0307 COG0313 # Protein_GI_number: 15893599 # Func_class: R General function prediction only # Function: Predicted methyltransferases # Organism: Clostridium acetobutylicum # 1 280 1 276 282 244 45.0 1e-64 MESGTLSLCATPIGNLEDISFRVLRTLKEADCIAAEDTRNSIKLLNHFEIKTPMTAYHEF NKVEKARELVSRLLKGENIALITDAGTPCISDPGEELVRQAIDAGIRVESLPGPAAFVTA LTLSALSTRRFVFEAFLPTEKSNKKERKAILESLSTEERTIILYEAPHHLKKTLEDLRET FQENRALSLARELTKKHEEVLYFSLDDAIRKYREEEPRGEYVLVLAGASREKKKEEAQAK WEEFSIEEHFSYYLNEGFSEKDALKQIAKDRGMGKRDVYKILKGAVK >gi|333758476|gb|AFIH01000001.1| GENE 2023 2067508 - 2069997 1839 829 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227873462|ref|ZP_03991714.1| ## NR: gi|227873462|ref|ZP_03991714.1| hypothetical protein HMPREF6123_1653 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_1653 [Oribacterium sinus F0268] # 3 565 640 1186 1187 322 38.0 1e-85 MKAQSLSSRLDVEDGIAATEEEGIAQNDRIPGTLKLTKVDSHDATKKLSGAKYGLYTDGA SGKVAVQRGGADYTAITNGNGELEFTGLDWYKNYYIKELQEPSGYLIDDDFYGKSHEKKP FTFSATSLSVTTQQENSKNGIQISMFGIDPLLSYSPEDKKIENWENKEAMKSYSFTISGN FRDGSTEKTYTTGNSGTESGAVLISGDLLAGQVYTIKEGTMLPSSLRPMKDLQFKINNKN RIELIQADKSIISHVDRNYLDLARERTALQFSARVEHQERVGKAEVLPLYGISYLLSEDP AGLQVIPANQKLTVNGDRVSTPTAFTTYKIDSAVRTGEIRADKRNGYRPYAEGSLSIFGL ERGKSYYLRASASNLAEDPDSRKNLDLSPDGIGLYKITVASDSNITVEKEEDGAKESFSP GEEPIFTYGLKKDKIAFHTTDFKTRTKDVGEQKYALYMKKDWSLKDLLKGEKGEDDSIEK GTEYRERVPKTVISYHGEDYLLQEVFENDADGNLAIENLTLAQDYLLLNLSEEREYENPS METAFRIVEETDGSRTMQVLSYGRDLRNPTRPRYQTAFSKGEELYIRRTKRDLQTDLYYP MNEEGVLGEGEEIAEKLTFQWLLYPRESHGGGSPHVSKTGRIPGTKPNGGKPGVEETQPN NPAVTEDVELIFVGLDKNGNPIYFPKRLLHPEIIRYLQKYGLPHKSSQTPISKKGRILRP KKKKGEIGGGYTRDEIADRLAEVLGSSRTLSQEDLDELNYIGEILGAMRRGQMDIYGRWV ATGDRSQLPVYLGMCALSAVLLEEYLRRKKKKSKRHKDKANTLFRISLL >gi|333758476|gb|AFIH01000001.1| GENE 2024 2069994 - 2075942 5413 1982 aa, chain - ## HITS:1 COG:no KEGG:bpr_I0894 NR:ns ## KEGG: bpr_I0894 # Name: not_defined # Def: LPxTG motif-containing cell surface protein # Organism: B.proteoclasticus # Pathway: not_defined # 45 328 282 562 1717 77 27.0 6e-12 MRRVFSLFLALMIVMQSIIAVGEEQIPALTVRDSEQDFVLDPRGEDSGSGEAFVGEGGSA EDFTLAGKEALTEGSGESFEDSLYQGMNAESKKEKEKNTSDPEQDLTSPSYLEANQIKSF KYEDEEITVNATLSVPESLPKGVVFLVRPIKEEERPEQYSAYTEALTEHEEDFRAGDLRL YDIGFFLTEEKTGEYEEVEPNRGTVDLKFSFRKPLEGKGELQATHLPLKKEKKEDGISTL DILDVKKEDIKVEELSVKEGKKYLGDKRDKLEFSLDSFSVVSFYRAGTTGEERIRNDVSF SLKNLTGRLSGETTDSDFTATEAGGKTNWKINKSYNPLNLDTVEMSLYFEVKNNRSIKNG DTIRIPFPELLQAVHVNPSPTDPSIADSGVYNKDGKKVFQYEVKKVSNHYELQLQFTEGI VDDNIRDILKNIPLKFRLNPDKIKAEGETSVEINIPGKTHVMQFPAIPELISGVKKTAEN LQKEGKIRWTIEVGTESKGAKLNGLTVTDIFDENRLKFLDAEWQNPATSSNINIKEAIEK KTNGTYSFTFPKEGEPIRAPQKIIFTTGLTKNIYKNPQNVEQNTVELSHEDPSRLISDPT KTHTKAVADMSVKKVELKKEGGQTEGKYISWQMDFNTNRAYAHKVAVVDSLSSGLIVDEE QGIKIESLNGPKKIVVLKQGNQAQNIPGGGVDGHASTVDYVISPSNIGGGNELRVNFGTG FDQAYRISFRTKVEEGAETTSATGAQVKNTAHVEVEYPLSDGGATGVTQLPSIANVPFHK AFIKKTAGGWNKASALMGWSLDVSTRGDDYDKAVVTDNITGDSALADLSISYKGTDILRD EPVANFDSADKTDTIVSEGVSLANLTVRYTPSATPNTAGGVLQITAEKLGASVPLDLSKL KISYHTKALHYIGHNKEAHEYKNKATLAIYQGTLLRHEMQSEEVKQSHSNDLLRKEIKTF YDDQEQRAYFHFTINANNDEYKGLENVVLTDDLSNIFKFRKKDGTGATSLSAEYFTITDA SDPKYPTKAVIHKAGGEQKLSASEITIDDTHKLVKVALNQPLENRLELDVYAYLNEEGRK RLYQFSGTDSLQDMEIYAGNTAKLESTTFPTSQVSNPSNTAVTVTAEGHANTENLWNEIL KKTGKQGEEAGKKTNVVNWTVKINPLGAKLSGSCILRDEIQDKTFLDLDSVQLYEVGHVS GTAKLPDTPEGLTPLPKGTGVWKAERKRSYTNASREAYTTALEITLPENTDKSYILTYRT YIKMVKGESAITRAENTITDKGQSKSIAVVDLNKNMDWSSSSSKVQFNMKKVDSLSAKLP LAKARYGLFLKDDLSELNTALAASDDEKVLGLAEDIQDTDDKGEISLAGDRNKEYYIMEL KAPAGYSLDKTKYGTYRINTGEKYFKDIYPLTRNILGIEEKKGELFTDERERKTYKTGEL TIQKHFEEHALSFTPRYTGKNQGNRNNYTAVFKLSIFPKKNDNTEKRVLKLKKLSEGEYQ YADLNAADTVEELQTAPSVNGVANLRFKDLPWGKYELEEIKTEEGYTLSSKIQFEVKDNQ GAGENQADVIYNGATVTAPIAIQNYPSKFAFEKLGDSGKLTEGEFRLHGKKEDFLKGDGA ANYTLVEDGANAYITIDKDNLTGNGFSLEGVLKADGKTKYVIEEMSAPKGYEIGAKGGFS LKADGSGIVAAGPENLGNFGIAGNTLKMKNQPTSFSFDEKDQNDYAVLDTEFVIYPAKET GERVNPTTPPFTTWRNQTQNSNTVKKLEADGYYRLERRQQSILYVQSKNNQEENSDYVLF KVSHDGKSMEKVKERGLSGAVSANKKTLTIRATRVLAHATLQKLDALPTTEGGTDFKALA GAEFTLYQVKDSDQRLKAEGLEAGGNMLSAIADYFNFLNRPETQNAKALGVYTTDRDGKI TTKKAAKNEVKVYGSKSLTEGLPVGVYYFVETKEPTGYTLQKEGAQKRNMSLLYETPIRD RS >gi|333758476|gb|AFIH01000001.1| GENE 2025 2076615 - 2077469 495 284 aa, chain - ## HITS:1 COG:no KEGG:Apre_0680 NR:ns ## KEGG: Apre_0680 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 269 1 269 278 234 49.0 4e-60 MKTSEQIKGAIRNISKKTGVNPNSLLQMCLFEGILEKLSKSKYSENFILKGGLLISSLIG VDMRSTMDMDTTLRGIPLNEESISNILNEILAIEIDADIEYKLIKLSPIRQEDVYEDFCA SISCIFGKINATLNIDITTGDVITPREMNYSYSRILEEGTIPIMTYTIETILAEKFETIS SRNITTTRARDFYDLYMIYSIYKDKIDKDILRKAIERTSKYRGSFETALQYKEIVELFRE SETPKELWKKYTQNNPYSKDVDFLDTISVYEEIGTVLNVNDDTK >gi|333758476|gb|AFIH01000001.1| GENE 2026 2077466 - 2078065 341 199 aa, chain - ## HITS:1 COG:no KEGG:FMG_1594 NR:ns ## KEGG: FMG_1594 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 8 198 4 194 195 144 39.0 3e-33 MSKRELLLKKIKENNGIITTKEALNLGIHKDILKELTIKEELEKIANGLYVLPDENIDEY LYFSYRIPKGIFSHETAAYLQGLSTRMPLVYVMTVKVGDNVSRVKSARDNIIFKYVKKDY YDIGKTTITGPFGREILVYDKERTILDIIKDKDRIDAQVFSEAIKSYFAGKEKNLLKLSK YAIRMNMEQALKRYTEVLL >gi|333758476|gb|AFIH01000001.1| GENE 2027 2078175 - 2078408 336 77 aa, chain - ## HITS:1 COG:no KEGG:Cphy_2846 NR:ns ## KEGG: Cphy_2846 # Name: not_defined # Def: hydroxylamine reductase # Organism: C.phytofermentans # Pathway: not_defined # 2 61 561 620 621 66 55.0 4e-10 MEEITKDMKISEILALNELIAPFLMQNGMGCVSCAASQAESLEEACEAHGIDVDDLTEDL NDVLREYLEMQEASRNA >gi|333758476|gb|AFIH01000001.1| GENE 2028 2078495 - 2079208 688 237 aa, chain - ## HITS:1 COG:no KEGG:Closa_0328 NR:ns ## KEGG: Closa_0328 # Name: not_defined # Def: Negative regulator of genetic competence # Organism: C.saccharolyticum # Pathway: not_defined # 1 234 1 236 239 212 49.0 8e-54 MKIEKIDDNSIKCTLSSLDLSSRNLNLRDMTYGSQAAKRLFNEMMQKAKEEVGFSIENTP LMIEAVPLQGGAVQLIISKVDDPEELDTRFSKFSAAGSGQNGWISELATQILEGAQGLMK QLKETEEEPGVAEEKKESGDEGIRLYRFRTLDRVIDAAKAVSYCDLGANSLYKAEDKKGY YLSLHSKGDDIDSLNRAANLLLEYGERVNGGSATEAYYKEHMEQLIQENALQKLKTV >gi|333758476|gb|AFIH01000001.1| GENE 2029 2079435 - 2080499 941 354 aa, chain - ## HITS:1 COG:CAC3715 KEGG:ns NR:ns ## COG: CAC3715 COG0305 # Protein_GI_number: 15896946 # Func_class: L Replication, recombination and repair # Function: Replicative DNA helicase # Organism: Clostridium acetobutylicum # 3 347 94 433 442 360 53.0 2e-99 MEVPSVANIRIYCEMVRSKSILRALIRTNEEIANMCYRGEEDLETILETTEKKIFNLLLE RNTREFVPISEVAMNVLRKVEEASKQKNAITGVASGFIDLDYRTAGFQKSDLILIAARPS MGKTAFVLNILDHVAVKKQEPVMIFSLEMSKEQLANRLLSLETKIEADKLRKGTLTDDEW GDLIEGVDRLSKSQVFIDDTPGITVSELRGKCRKRKLESGLSLVMIDYLQLMSGEKGKRS SENRQQEISDISRSLKALAREMDCPVIALSQLSRAVEQRPDHRPMLSDLRESGAIEQDAD IVMFLYRDDYYNKDTEHPNEAELIIAKQRNGPIGTVRLLWQPQYTRFKNAEKER >gi|333758476|gb|AFIH01000001.1| GENE 2030 2080511 - 2080789 197 92 aa, chain - ## HITS:1 COG:CAC3715 KEGG:ns NR:ns ## COG: CAC3715 COG0305 # Protein_GI_number: 15896946 # Func_class: L Replication, recombination and repair # Function: Replicative DNA helicase # Organism: Clostridium acetobutylicum # 7 79 2 74 442 62 41.0 3e-10 MASQEEELLLRTIPHSKEAEASVIGAMIRDGDAVLQALEILQPEDFYGRQFQVLFSTMKE MAREGISIDFVSLQDRLKAKKDVPPEFFPWKP >gi|333758476|gb|AFIH01000001.1| GENE 2031 2080793 - 2081239 645 148 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227873474|ref|ZP_03991724.1| ribosomal protein L9 [Oribacterium sinus F0268] # 1 148 1 148 149 253 85 3e-65 MKVILLKDVKSLGKKGEIVEVSEGYGRNFIIPTKAGVLADAKNLNTLKLQVQNAEKIAEE KLEEAEALKKKLEEVKLIFHMKAGKDGRAFGSISTKEVQEELKKQYDISVDKKKMELDVP MKNFGGYDIKVKLHKDVEATLHVSVQSE >gi|333758476|gb|AFIH01000001.1| GENE 2032 2081239 - 2083161 670 640 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|194246575|ref|YP_002004214.1| 50S ribosomal protein L9 [Candidatus Phytoplasma mali] # 1 637 61 685 837 262 28 2e-88 MLIFFALLYLCAAIVLYRSRKSLMLSALLEFSLRANENRAKLFEEMPTAYCIIGQNGDLL WENKALHKILQNGNKPEKNIFSIFPNMQKEMLEEKEAVVELHSSFMGRKYCIDIIRLDSL RDEGEVVHYGLSEEEELVAVYLRDETEEVELQQKLDEERVVLGLAYIDNYEDVMEQIEEV RRSLLTALVDRKITRYISSANGVIKKIEKDKYFFLLKQTALEKMMEDRFSILEEVKEVDM GNELAVTLSLGIGYGAGEFTQNYDYARTAMDMALGRGGDQAIVKNPEKLSFFGGKSQSTE RVTRVKARVKAQAFEELIDSKDKVLIMGHKNADMDCLGASVGVYRMITALDKRAYIVQNK VTSTILPLKERFLNNPDYPNDMFIDGETAKALVDNNTMLVVVDCDRPSIIDEPDLLTMVK TKVVFDHHRQSSETIQGAVLSYCEPYASSASELIAEMMQYIREGIKAKPIEADCMYGGIV IDTREFTNQTGVRTFEAAAYLRRCGADIIRIRKTFREDFIDYQAKADTISKADIYREYYA ISTLERTGTESPTVLCAKAANELLNIRGIKASIVLTKVEDTVFISARSIDELNVQVLMEK LGGGGHRTVAGAQMKGFTIEECIDKVRAAIDEMIEEGEVE >gi|333758476|gb|AFIH01000001.1| GENE 2033 2083309 - 2083377 91 22 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAKIIRKKDLEKKQQINRDCFV >gi|333758476|gb|AFIH01000001.1| GENE 2034 2083585 - 2084091 567 168 aa, chain + ## HITS:1 COG:no KEGG:Closa_1057 NR:ns ## KEGG: Closa_1057 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 32 109 29 102 336 72 42.0 1e-11 MKKMNLVATLAIAMSIMASIPAMANWNMGQGENSNRWWYGNEDGSWCHSGWFWLDGNRDG LAECYYFDDAGWALMDTTTPDGYTVNADGAWYVGDPDEGVKEKEVEVQYEQAEQDAINKK KPVIKVPEKKNGVMKNYKPRGTGIQGSGVTPKSGEVNAADFSREQGKN >gi|333758476|gb|AFIH01000001.1| GENE 2035 2084226 - 2085668 1175 480 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227873480|ref|ZP_03991729.1| ## NR: gi|227873480|ref|ZP_03991729.1| hypothetical protein HMPREF6123_1668 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_1668 [Oribacterium sinus F0268] # 1 480 1 474 474 247 37.0 1e-63 MEKEMQEELVLDLPELLAMYLRKGILILACSCIFGILFASLRTLRRGEENPAVSTEEESA FDKERALEEGTANYVKTQLEREKDLALWEVKRLEESALFQLKPDSVYERQMDLYLKLPNP VDAQGNSESIYRDRIAEREGLVEAYKTLFRSTDFYDQIASSTGSLKSSDIPDLLFLDADD KTGNISLSFAGASAEEVEKMGNAAKAYWENAAAKLGEELEPHSIILLSDTSAQGMRVHSV LTYQNSGENVEGRGQDSILGRQEDKKASLNKRLENIKNLKDQEKSLPKETASVNLGFSKR TFAKQAILGVILGGFLSVFVFTLQYLFEKKLPREEDLESIYGFTVLGSKRRFGREGLCKS LSDKLSGDREREGDEEALLSLAKSNLSLLLKERNIAEEILFVGEDKTLLEKTVKFMNDES PYLSCSYACDIFKNEEGISKLGMYRTLVFVAAGRSDLRSLLNMKRKAETLKKEVLGLLLF >gi|333758476|gb|AFIH01000001.1| GENE 2036 2085830 - 2087089 1032 419 aa, chain - ## HITS:1 COG:CAC0282 KEGG:ns NR:ns ## COG: CAC0282 COG0402 # Protein_GI_number: 15893574 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Clostridium acetobutylicum # 7 419 12 424 428 332 42.0 7e-91 MEYLVIGDLCYSTGPEHIETKENAYLHVKNGKCLAVYESLPSNCSALEIKDYRGKLVLPG MVDLHLHAPQYAYRGTKMDLPLLDWLNINTFPEEAKYRDTDYARAAYRNFVEDLKESPTT RAVIFGTLHKDATLCLMELLEESGLETMVGKVNMDRNSPDYLTEHSAEESLKNTREWLEE IPKNYRHCRPILTPRFTPTCSDELLLGLGKMMEEKGIPLQSHLSENKAEIAWVSELCPGT RNYGESYDRYGLLNHTVMAHCVHTGEEELKLLIQRGCFICHCPQSNTNLQSGVSPVKHFL KKGAKLSLGTDVAGGANLSMFRALTDAIRASKLRNCLLEEHDSALNLEEAFYMATLSGGA FFGKVGAFMPDYEADFLVFSRKRQSVREESLIERLEMLLYTEKELFEMEAKYVQGRKVL >gi|333758476|gb|AFIH01000001.1| GENE 2037 2087204 - 2088562 1334 452 aa, chain - ## HITS:1 COG:VC2278 KEGG:ns NR:ns ## COG: VC2278 COG2252 # Protein_GI_number: 15642276 # Func_class: R General function prediction only # Function: Permeases # Organism: Vibrio cholerae # 1 451 2 428 430 350 48.0 3e-96 MEKFFKLKEHQTDVRTELIAGITSFMTMAYILAVNPRVLSAAGMDAGSVFTATAIASAIA CIMMALLANLPFVLSAGMGLNAYFAYTVVLNMGYTWEMALAAVFVEGIIFILLSLTNVRE AIFNAIPPSLKLGVSVGFGLFITFIGLQNAHIVVDGATLVTLFSFKGSVLNGTFQSEGIT VLLALLGVLITACLVIKNVKGNILLGIVITWGLGILCQLTGLYQPNPDGGFYSLIPGKVV SMPASVAPTFMKMDLSKLASLEFGMVVFAFLFVDVFDTLGTLIGCASKADMLDRDGKLPG IKGALLADAIGTTVGAIFGTSTITTFGESASGIAEGGKTGLTSIVVGVLFLIALFFSPIF LAIPSFATAPALIVVGFFMMQQVAKIDWNDMLTAIPVFICIIAMAFTYSISEGIAFGIMS HTVIHLLCGKGKKVSILMYVLSFIFILKYIFI >gi|333758476|gb|AFIH01000001.1| GENE 2038 2088958 - 2090670 1179 570 aa, chain + ## HITS:1 COG:lin1853 KEGG:ns NR:ns ## COG: lin1853 COG1001 # Protein_GI_number: 16800920 # Func_class: F Nucleotide transport and metabolism # Function: Adenine deaminase # Organism: Listeria innocua # 3 558 5 566 579 306 32.0 8e-83 MNKSLYDKLSKVCKKESPADLIFRDAHIFDAYTASFYDGDVAVKQGYIAGIGKDFPGDTV IDCKGKYLFPGFIDAHAHLEAALVPPNEVISAAAACGTTSFIVTPHEVWTVAGKEGIDYL LKQSEKSPANVFLMLPYCISPSLSEGHEAKFSSTDFFSFLKNPRILGLEELMDTRGVIHS NPVLWKTADGAESKFPGGYSSFLSLDSEACSLMKLQTGQIPKDFSYTLDEVHAGMHIHIK EDSAVHKLETSIQGILSKGIDSRSFSFCTDGKKVGDILREGHINHLIRRAISLGLPVGKA YQMASINAAECYHLSHLGVIAPGKQADLVLLSDPKKVDIEAVFHKGKRVEKKEKYPLPHC PKELKKTLHFPPLEEEDFHLPIFKQNSTVIGIQEGEIRSSRLQVNFRRSNNFDPLENPDY RKIASISRNNGRKRMCVAICSGYPIRQGAVASSLSRDCDGILVIGDSDRDMCLAANELLR TQGGVSVVSQGTVLFSLALPIMGLLTECGHEKAEEQLRLVKEKLHEMGIGTAMDPLLPLA FLSSPSIPEIRITPRGMYVIKGAQSRLLKQ >gi|333758476|gb|AFIH01000001.1| GENE 2039 2090782 - 2091435 621 217 aa, chain + ## HITS:1 COG:no KEGG:LM5578_2661 NR:ns ## KEGG: LM5578_2661 # Name: not_defined # Def: hypothetical protein # Organism: L.monocytogenes_08-5578 # Pathway: not_defined # 76 144 15 83 111 92 59.0 1e-17 MEENTKQENVVQNSTTSGNTTQGSTAQNSGAQSGTAQGNVAQGTPIYVGSPAPSTQNAQR TPGSIPVYPVEAKGKSYFDGTTLQLIGWRFLGAMVSLITFGLCIPWAYTMIYKWEATHTY IEGRRLKFDGSALQLFGKFIIWFLGGFGLSILFIIAEVIVIFAAGGFEDTFDSIQSGIMP PLALIVVYLIFILALFLYDAWVEVALRKWKASHTFFA >gi|333758476|gb|AFIH01000001.1| GENE 2040 2091569 - 2097217 5647 1882 aa, chain - ## HITS:1 COG:no KEGG:FMG_P0126 NR:ns ## KEGG: FMG_P0126 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 865 1422 503 1078 3175 84 24.0 4e-14 MHRPRIMHNRKRLMALFLVMNLVLSPLSSYAVEEGRIETGVEGLTENRGELARKEDAAVS SEESRSSEEDKDAVQATDESKAAEEPSKASSEAFSVDSTKKEGDSVFTEEEKDFAKAGEF RKSLEDGTEIQVSFEEGTFPKGTKFFATPILNEKKIEKALAISEKLLKQESAFSEGGKTE GEEESASEVIDIYGIDLSFKVKEENGIYREVEPEEGKEVSVSIRYPEGKSFFAKKEEEEA DKTVSGLNGESSSEYSEELSYVLHLKDEEHPELIETKEEEGKLLFKTNSFTPYYFTRVRR RREAPSEKISTEFKVYWTDPATTGANPTRSYTGTVHKIEDQKDVVLNPANNARFTTTYKI LLNLKGRKDTVYPEGTVSIDIPVNVFKSWDPANPGRVLVKEGNGQSRGAELLSSYRSGIP KAPNKTGQSSFYYTEITNTVNGEAYYRLTNYRPLEGNTEFGVEVGYDFTPTMLGVTRTQI GGKEVGEYKWEFPVELHVNHDDNQFDLDDAKQLSVDVRTKVEPTTVNVYHGRKGQNQGLY FDWDNSWGERPSDDHPGDFFYGVFYVEVARSKNSSQAFDYVFTEPSNPAVLEGGKLIGAK KYPQSQNFDDYRYKSWIDQQVDASYKDITKHMDGTAAPASQPWLANPIGKTYLGIPKDPY NKHADKAQYVGPEEYNGTFNTQIYALLYRYPMQIIEDAKAHGINMVHDGIYIGTGVKLKE IWADTYEREQEFTITDQNKKMHVLLPETGNGTFKLDKWVQGDPTNKSLLNLDTLQSFYAK REEAPLVYNAFRQSFSLSYISTVSRDSVNFPYGDDRYTTNGVKFSLQDNGEYSLLTLPNG KSSAEGKEVAKDLSNTHYLDPITGGNPYSLTEEDFSYKSFFVPKFNTYDVKKHANPAIKL TELNQPSTDYAKYPEVKVMIRKKGEAKNHFTEYGTVKRRANGELIFVNQSGAETKISETE PMALPDDTVGIDFRGESSFYRTEFTASFTLNIHPTTAMANRIQEDINKNKTSLITGPAEG RYSEGASELFHARLGESFGRIGYELNVFSYKTDILKEQTGESVYHSDVLEQWTPISIELL NKANVPVSMRKRSVMDPYLIKEGIFYDLLPFGTYVNKEEVELGTWEISNASPISASRKYI QDTDYTVHFQRNWEGTGQTMMIVKVKVPDSANTLYWDTGFNCAGMKLKYTLHNPYTNIID RGREPMNTVGFLNTGDTEFKANFSNSENPDVEKREAYRNLMMEGAGNGHKMILGERKLNF KPITVIEANLSNTVSTEIHKSFLKENISYLGEEYRHRLQYQAAEATRTKDFVFYDILGEE ANRNGDFQGLDLSSLKMKASYNPSNPSALDYCKPVCYYATTIPDDRNVDDSTVWTAFDPD NMSGIDKKSIKAIAIDCRKTVSGQNFILDQKGIMVAYVEMLATRDSAKVPVVNTNIAYRK ATLFTGGTVPMNVNLTEAKSEAKHAIVPPLTLDIPVKKELEVPAGLTAPDIRENFSFNIR ALGDAPLTDQYDNPIINNIKNPDENGGIIRFSGIRIVKPGIYKYRIKESKLVNTAGVTPD SMGEKELLVTVVRENNILKANLSATDENPLIFRNVYGVQEVKPEIKVSKSLLSSKADKPD ISGKYQFTLKALNGAPMPDEAGGASTLEKTNPDADGGQMSFGRITFTTPGEYKYELVETG EVTDVRNDERPLREITITVSDFGTGKLIALVSGDSLEYKNRYIPDEPPLPTPGEPSYPGG GGGTPRKPIFPNPNTPGGPGEKPKEPDKPTVPEEPETPGTPENPTPGGGENVPPTPSIPE RIRIIEKRIGEILGEARKRPLTPEEQKELKRLGEVLGALRREQSRKVNTADASRMLWYAL ASSLSIMLLAAYSLLERAKKKR >gi|333758476|gb|AFIH01000001.1| GENE 2041 2097606 - 2098676 1090 356 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0343 NR:ns ## KEGG: Vpar_0343 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 348 1 348 353 374 60.0 1e-102 MNFKAERIHIAIAGGIIGIISVALVLLGNPANMGFCLACFIRDTAGGLGLHRAEAVQYIR PEVIGLVLGAMILSMARGEFAPRGGSAPVTRFFIAFFVMVGALMFLGCPFRMVLRLAGGD LNAVVGLIGFVVGIAAGVFFLKNGYSLKRTYKQTMVEGLSLPIVQLVLLILLVSAPAFIF FTAEGPGAKHAAVIYSLGAGLIVGALAQYTRLCMVGGFRDIILFREPKLLIGFCMIFLTA LIGNLIFGKFHLGFADQPVAHTDSLWNFLGMVLAGLGCTMLGGCPLRQMVMAGEGNADSA VSYLGLLVGAAFCHNFGLAASGKGPTPNGKIAVIIGLVVLVCIAFMNTFGKKEERS >gi|333758476|gb|AFIH01000001.1| GENE 2042 2098678 - 2098887 212 69 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|291458391|ref|ZP_06597781.1| ## NR: gi|291458391|ref|ZP_06597781.1| hypothetical cytosolic protein [Oribacterium sp. oral taxon 078 str. F0262] hypothetical cytosolic protein [Oribacterium sp. oral taxon 078 str. F0262] # 1 60 1 59 67 69 60.0 8e-11 MIDARGLSCPQPVLLIKSAVEKTHESQYTLLTDNMPCVENVCRFAKSAGYEAEYKKQNEE EFLVTLTRK >gi|333758476|gb|AFIH01000001.1| GENE 2043 2098889 - 2099152 243 87 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0344 NR:ns ## KEGG: Vpar_0344 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 4 83 2 77 82 64 43.0 1e-09 MLREYIATFHSHFGAARFHKEKVKEGKKAYLQPVPRDLSSSCGTAVHFYVEDNGKSEPLS IKDPHGEIEQIVEIVGHSYKVCYAPLE >gi|333758476|gb|AFIH01000001.1| GENE 2044 2099295 - 2100113 901 272 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227874480|ref|ZP_03992655.1| ## NR: gi|227874480|ref|ZP_03992655.1| conserved hypothetical protein [Oribacterium sinus F0268] conserved hypothetical protein [Oribacterium sinus F0268] # 57 270 74 315 315 102 45.0 3e-20 MLPNVKAVGDSYQNKVLGHTKKEKEPEHKESSVLSPNVADKEVATLSKTDRLTLSNEATR KAEEKTLTVEEQLSDKAKGYLAKLRKSRKNVDFRISEKGMEEKYLDKTTAKEFTVVLTNE EIEKMATDKAFEKKQLAIIDKTMQEMLKASLGLGEENGSGKTNASDVKDIALRIKEDGSM EILASLEKSSKSLKQTAAEQAKKKETEKAEAKRLEKKRESEKETKKLAEKREAKKAEKER VKKVEVKANSIAELIEKMKAIDWDKIPETEKE >gi|333758476|gb|AFIH01000001.1| GENE 2045 2100134 - 2100835 766 233 aa, chain - ## HITS:1 COG:ECs5174 KEGG:ns NR:ns ## COG: ECs5174 COG0235 # Protein_GI_number: 15834428 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Escherichia coli O157:H7 # 2 231 1 228 228 274 57.0 1e-73 MLESLKEEVFQANLELKRQNVVIYTWGNVSGITEDRKYMVIKPSGIAYEKMKAEDMVVVE LETGKVADGKWNPSSDTETHLVLYRHFPTLRGVVHTHSTYAVSFAQAGKAIKALGTTHAD YFYGDIPCTRALREEEVKEAYERNTGNVIVECIEELKLDPLAVPGIIVKNHGPFAYGNSP AKAVENAVVLEKAAEMAFRTLLLNPNASMEQYILDKHYFRKHGKNAYYGQKSQ >gi|333758476|gb|AFIH01000001.1| GENE 2046 2101226 - 2102362 235 378 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167854980|ref|ZP_02477755.1| 50S ribosomal protein L13 [Haemophilus parasuis 29755] # 56 354 22 321 346 95 27 1e-17 MKKNLMKLLGLGLLSLSLVACGGAKSAETKAAETKAAKQDANAEKTEAAQDKTEAAAEKA EDLGDSLTLYCSMTDDDIDTVLEGFNALYPDITVEVVNGSAGELFARLKAEAANPQGDVM LGGMNQADGDKNKDIFEPFISVHENELPDKYKSNNGFYNYDHLSSVVFCVNTDLEKELGL DIKDYKDLLDPKLEGKIVFSDPNESSAAWNNISNIMAVYGNDSEEAWNMIEGLMKNKMVI QGSSSACFKNVADGEYVVGLTYEDGASTLLKSGAKNIKLVYPASGSSNFAFGCAVVKGAP HMAAAKAMVNFLQSAESQTARGNALGTIRLTNPNAKIDYKYIPKDDEVKWVDRDIDWLIK NKDQVLEHWNKLYTQYYK >gi|333758476|gb|AFIH01000001.1| GENE 2047 2102478 - 2104124 1693 548 aa, chain - ## HITS:1 COG:FN0377 KEGG:ns NR:ns ## COG: FN0377 COG1178 # Protein_GI_number: 19703719 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+ transport system, permease component # Organism: Fusobacterium nucleatum # 1 546 3 548 550 528 57.0 1e-150 MMKRKLEIWTFFTFALLALFIVFLIYPLFGILQQSVIDENGRFTLEQFHKFFTNPYYSST ILNSFTVTIAITVSTLVLGIPFAYFYSFYQLRGAKFLFVVSILCCMSAPFIGAYAWIMLL GRSGVITQSLAKIGINIGSIYGFKGILFVQALKLYPLVFIYMNGAFKNIDNSLIEASTSL GCKGINRFFKIILSLSMPTILAASLLVFMRSFADFGTPLIIGEGFRTFPVEIYKQYIGEN GTNHAFAATISVVAILVTALVFLIQKWVGKRFTFSINALHPVEKRRPKGLMGVLIYLYTY GLSGIAILPNVYIIYLSFRNCDRSVFKPGYSLINYTQAAKKLLVRSIQNTFLLGFLSLAL IILISIIIAYLVVRRGSVLNNTIDTLSMLPYIIPGSVIGIALAVSFSKPPIVLVGSLWIM VLSLVIRRMPYTIRSATATLVQIPYSIEEAALSLGSSKLKTFIKITVPMMANGILSGAIL SWVAIVTELSSAIILYNNKTITLTMSAYVAISRGNYGIAAAFSAVLTILTTISLIIYLFV SKSEDVKV >gi|333758476|gb|AFIH01000001.1| GENE 2048 2104121 - 2105236 1219 371 aa, chain - ## HITS:1 COG:FN0376 KEGG:ns NR:ns ## COG: FN0376 COG3842 # Protein_GI_number: 19703718 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport systems, ATPase components # Organism: Fusobacterium nucleatum # 1 369 1 367 371 447 63.0 1e-125 MSVAISIKHAVKKYGDSTIIPDLSLDIHEGEFFTLLGPSGCGKTTLLRMIAGFNSIEGGD FYFNDKRINDLDPAKRNIGMVFQNYAIFPHYTVRQNVEFGLKNKGVPAKERREKSDEFLR LMQIENLADRKPERMSGGQQQRVALARALVIQPDVLLMDEPLSNLDAKLRVDMRGAIRRT QHQVGITTVYVTHDQEEAMAISDRIAVMKGGVLQQVGTPKSIYQRPANLFVSSFIGRSNV VEAELKQEGGEDFLVFSNGKKAQIQNVQGQFRKNQKVKLSVRPEEFILCNKEEELLRARI TESIFLGLNTHYTVELETGARAEIIQESTISNILNVGEEISLKINTDKVNVFTEDGEKNI LISADGKGVQV >gi|333758476|gb|AFIH01000001.1| GENE 2049 2105210 - 2105293 56 27 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFNRNGYAQDLLLLTLYQAFVAFVPIV >gi|333758476|gb|AFIH01000001.1| GENE 2050 2105521 - 2105730 156 69 aa, chain - ## HITS:1 COG:lin0836 KEGG:ns NR:ns ## COG: lin0836 COG3326 # Protein_GI_number: 16799910 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 12 63 5 56 85 57 55.0 5e-09 MGIESLFTPFGVYFLSINIIAFLFYGADKYKAIHHAWRIPERVLLLTALMGGAFGSLFAM YFFIIKRKN >gi|333758476|gb|AFIH01000001.1| GENE 2051 2105721 - 2105990 374 89 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNKKKMLEEILQENRQVNRNLVHLGNLIGLLILLEGIKEGKKRRDKGMVGLAKLGLVLVS VLEAILTALNIQDIYAKYKEEKEEDELWG >gi|333758476|gb|AFIH01000001.1| GENE 2052 2106033 - 2106656 481 207 aa, chain - ## HITS:1 COG:alr3338 KEGG:ns NR:ns ## COG: alr3338 COG0406 # Protein_GI_number: 17230830 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Nostoc sp. PCC 7120 # 1 170 232 392 449 95 36.0 8e-20 MRIFLARHGETDWNVERRIQGSTDIPLNENGIRQAHSLSSYLDRLFHAEGGFLSSIFTSP LMRAKETAEIVGRRLGVEVETVPGLEEMNFGICEGKTWIESKSLYPKELEEWEQNKRYRR ISGGESYQDVLNRFFSAYSLIKKKRSALDADAQKGDILIITHGAVIMLLLSLRDGYAMSD SFIRVRVENARAYAFKEEEIEAIRTML >gi|333758476|gb|AFIH01000001.1| GENE 2053 2106679 - 2108109 1312 476 aa, chain - ## HITS:1 COG:CAC3595 KEGG:ns NR:ns ## COG: CAC3595 COG2509 # Protein_GI_number: 15896829 # Func_class: R General function prediction only # Function: Uncharacterized FAD-dependent dehydrogenases # Organism: Clostridium acetobutylicum # 3 472 2 454 457 590 61.0 1e-168 MKNYDVAIVGAGPGGIYAAYELIKKNPALSVVVLEAGHSLEKRHCPIDGKKIKSCISCKS CSIMSGFGGAGAFSDGKYNITNDFGGTLYEYIGKEEALSLMKYVDEINMEHGGEGTRLFS TAGTKFKKLCMQNRLKLLDASVRHLGTDINYVVLEKLYAELKDKVEFHFDTPVEKIEIQG RREEKSSAEKSDTKVDCESYLLHTKKEDFSAKRCIVSVGRSGSKWMEKVCDELGIPTKSN RVDLGVRVELPAVIFSHLTDELYESKIVYRTELFEDNVRTFCMNPNGIVVNENTNGIVTV NGHSYEGEDKHTENTNFALLVAKHFSEPFKDSNGYGESIARLSNMLGGGVIVQRFGDLVR GRRSNQKRIEEGMVQPTLKATPGDLSLVLPKRILDGIMEMIYALDKIAPGTANEDTLLYG VEVKFYNMEVTLDEHLETKYKGFYVIGDGSGVTHSLSHASASGIFVAREIAEAEKL >gi|333758476|gb|AFIH01000001.1| GENE 2054 2108371 - 2109519 1513 382 aa, chain - ## HITS:1 COG:ECs3659 KEGG:ns NR:ns ## COG: ECs3659 COG1454 # Protein_GI_number: 15832913 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Escherichia coli O157:H7 # 1 378 2 379 383 450 60.0 1e-126 MANKIVLNEVSYHGKGAILSVPEEAKGRGFKKAFVCSDPDLIKFNVTKKVTDLLDKEGLP YEIYSDIKANPTIENVQNGVAAFKKSGADYIIAIGGGSSMDTSKAIGIIIANPEFEDVRS LEGLSATKKPSVPIFAIPTTAGTAAEVTINYVITDVEKKRKFVCVDPHDIPVVAFVDPDM MSSMPKGLTASTGMDALTHAIEGYTTKGANTITDMFNLKAIELIAKSLRGAVDNTPEGRE GMALGQYLTGMGFSNCGLGIVHSMAHGLGALYDTPHGVANAIILPTVMEYNKDAVGEKLR EVAKAMGVSGTEKMSKEEYQKAAIDAVKKLAEDVGIPKDLKNIVKPEDVDFLSQSAMDDA CRPGNPRDPKFEDIKELFLQLL >gi|333758476|gb|AFIH01000001.1| GENE 2055 2109548 - 2110204 628 218 aa, chain - ## HITS:1 COG:SP2166 KEGG:ns NR:ns ## COG: SP2166 COG0235 # Protein_GI_number: 15901976 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Streptococcus pneumoniae TIGR4 # 3 214 1 212 212 306 68.0 2e-83 MDMEKERQLLIKYGRKLVEAGLTKGTGGNLSVFDRASGRVAITPSGIDFFEIQPEDIVIM DLDGHVLEGNRVPSSEWAMHVMPYKYREDIDAVVHAHTMYATILSCLREDLPATHYMIAV AGENVRVAEYATFGSMELAKNAFDAMKDRKAVILANHGLLAGAKDLANAFNIIEEVEYCA EIYTKARSIGNPVILPEEEMKVMLEKFKSYGQRKGEDK >gi|333758476|gb|AFIH01000001.1| GENE 2056 2110409 - 2111362 913 317 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227873185|ref|ZP_03991472.1| ## NR: gi|227873185|ref|ZP_03991472.1| hypothetical protein HMPREF6123_1411 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_1411 [Oribacterium sinus F0268] # 1 179 1 179 179 235 70.0 3e-60 MWFILSLVAVFFWSGSDFFSKLGSPEKDTNSHLKMVVAVGLVMGSHATYQVLVNGVTFNL QTVWVYLPVSFLYIFSMLLGYIGLRYIELSITSPICNTSGAVAAFLSFLFLKQTLSFPQL IATILVIVAIVLLSYFQKQKEEAELKESGEEPGMKHMNSFLAIFFSIAYCIIDGLGTFMD AVVLSPISDNPAERTLMDSIFVHRLSEDSANVAYEYTFLAVALITLLYLVFVKKTKFFPS YDGAKLIGAMSETAGQAAYIVALAANAVASAPLISSYCIFSALWAHIFLKERLSKKQYFA VALAVVGIVIMGFFGED >gi|333758476|gb|AFIH01000001.1| GENE 2057 2111589 - 2113295 1770 568 aa, chain - ## HITS:1 COG:FN1145 KEGG:ns NR:ns ## COG: FN1145 COG1164 # Protein_GI_number: 19704480 # Func_class: E Amino acid transport and metabolism # Function: Oligoendopeptidase F # Organism: Fusobacterium nucleatum # 13 568 1 554 559 393 41.0 1e-109 MHFTYDYELEEKMKFTEFPYERIDFDKLKADFLELCEGVDKAESGEELFALHQKCYKLVD DVMTESVIASIRNDIDMTDPFYEKERAFYDANMPIFRNLLVDYQMRIYHSPHRAYMEEKL GHVAFKNMELAQKAVDIGLIPLMQKENELTTEYSKLLASAKIPWEGENLNLSLMTPYLTA EDREVRKKAWKAYTKFFEDNAEKLDSIYDALVKNRTEQGQMMGYPDFTEIGYARMNRNCY GEREIASFRQQVKRDLVPFVQKLHERRRERLGLDKLYYYDEGVFFKEGNPAPIGTPEEIL KAGQKMYDALSPETAKFMQDMMKMELFDVLGRKNKRTGGYMEMLPNYHMPFIFANFNGTA GDCDVITHECGHAFQGYITADLPIHEHNQLTMETAETHSMSMEFFTEPWMDLFFGTRAKD YLSMHFEEFLMFIPYGTMVDEFQNMVYKNPKMTPKERKLLWRTLEQEYKPHLDYADNTFM EEGGFWQKQHHIYDLPYYYIDYCIASINALQYKAWMDKDFQGAWKSYMEFSKCSASLFFT ELEEKAGLMNPFKEGTIKKIVEDLEKNL >gi|333758476|gb|AFIH01000001.1| GENE 2058 2113256 - 2113351 69 31 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEYSHRNVMLIPIVLDCHLCISLMIMNWRKR >gi|333758476|gb|AFIH01000001.1| GENE 2059 2113492 - 2113866 112 124 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0421_20941 NR:ns ## KEGG: HMPREF0421_20941 # Name: not_defined # Def: hypothetical protein # Organism: G.vaginalis_ATCC14019 # Pathway: not_defined # 1 119 7 125 125 174 71.0 1e-42 MGLPEMEELWNKLQTEYRIGTISKNDAIIFKKWGKALKLLSENPRHPSLKTHDIEVLSER YGERVWQSYLENKTSGAMRIYWVYGPDKKSITIIGLEPHPEDKKNGAYERITLSDLPLMK KDES >gi|333758476|gb|AFIH01000001.1| GENE 2060 2113894 - 2114136 217 80 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0421_20942 NR:ns ## KEGG: HMPREF0421_20942 # Name: not_defined # Def: hypothetical protein # Organism: G.vaginalis_ATCC14019 # Pathway: not_defined # 1 79 5 83 83 114 69.0 2e-24 MEAAKEYNVHLDSKKRVTLRGALYQYYNVKEYENGCIMLEPRELTVPDTISARTLKDMDK AISNYKQGYVSDPIDLSDFG >gi|333758476|gb|AFIH01000001.1| GENE 2061 2114242 - 2115612 777 456 aa, chain - ## HITS:1 COG:FN1101 KEGG:ns NR:ns ## COG: FN1101 COG1373 # Protein_GI_number: 19704436 # Func_class: R General function prediction only # Function: Predicted ATPase (AAA+ superfamily) # Organism: Fusobacterium nucleatum # 7 453 21 463 470 173 29.0 7e-43 MPDFGEKMLKRKIEKDLLNWITSGEKALLIYGVRQAGKTYIIRACLEQSGCDYVEFNLIR QSEIVDILREANSIDDLILKLSLYSSKKIIPGKTIIFFDEIQRYKEIVTKIKFLVEDKRF RYVLSGSLLGIELVNLKSAPVGYLQTLKMFPLDFEEFLQIFNVEDKVLERLRSSFLSKTP VDEVFHQKIMEIFNLYLIIGGMPAAVEQYRKTENIDNVIEEHKAIIEQYKLDFTQYEEEN RKLLLTQIYELIPAELNEKNKRFKLADIKANLRFERVSDSFTWLWKAGVALATFNTTEPT VPLLLNEKSTLFKLFLSDVGLLTSLYGKSCKLKIVSKEKDINKGSVYENVIAQELCAHNY PLYYYSNKKKGELDFIIEHAGEVLPIEVKSGKDYEKHSALDNILRVPEYGIKNAYVFSND NVKTRGQVSYFPIYMVMFLEEKSIDFVDISLDKYKL >gi|333758476|gb|AFIH01000001.1| GENE 2062 2116017 - 2116646 604 209 aa, chain - ## HITS:1 COG:FN0036 KEGG:ns NR:ns ## COG: FN0036 COG2323 # Protein_GI_number: 19703388 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Fusobacterium nucleatum # 4 209 5 210 210 228 56.0 6e-60 MNPFLFVAIKLLIGFLAMTLIINITGKGNLAPSSASDQVVNYVLGGIVGGVIYNNSIKIY EFVAILGIWCLLVLCQKWVKNHNVKAKQLIDGKAHIIIDDGKILIENCKKSGLSAHDVAF KLRTNGIFSSDDVKRAIVEQNGQLIIIHSGEENPKFPIITDGQVQHDILKVIGKDEEWLL EELKKQGIEKCSDIFLGEYVDKQLKLTTY >gi|333758476|gb|AFIH01000001.1| GENE 2063 2116737 - 2118401 1530 554 aa, chain - ## HITS:1 COG:FN1145 KEGG:ns NR:ns ## COG: FN1145 COG1164 # Protein_GI_number: 19704480 # Func_class: E Amino acid transport and metabolism # Function: Oligoendopeptidase F # Organism: Fusobacterium nucleatum # 1 554 1 552 559 384 39.0 1e-106 MKLSEFPYERVDFTKMEKELSDLTKALDKAKSVEEVFSIHKKYYKMQDDVMTAMVLANFR NNIDMTDEFYEKEKDYYDEKMPGFWNAMVEYQKKLYHSPFKKEMEEKIGHVAFKNIELAM KGMDEKLIPLMQKENELTTVYGKLLGTATIEWEGEELNLSLMRPYMTSVDRSVRERAWEK YSAFFEEHREELNSLYDELVKNRTEQGRLLGYPDFTELGYARMNRNCYGEKEIESFRNQV KRDLVPFVEKLHEKRRKRLGLEHLYYYDEDVFFPEGNPAPCGSPEEIMAAGEKMYDELSP ETSTFMRKMREMELFDVLGRKNKSTGGYMDMLPNYKMPLVFANFNGTAGDIDVITHECGH AFQGYLTANLPIREHNDLTSETAETHSMSMEFFTEPWMELFFGERADDYREMHFEDTLMF IPYGTMVDEFQNIVYKNPEMTPEERNELWKKLEKEYRPHLDYKDNAFLNEGRLWQKQSHI YENPYYYIDYCLAAVNALQYKAFMKRDFKEAWKSYMEFSHLSASLFFTELEKKAGLMSPF EEGSIRKLVEGLED >gi|333758476|gb|AFIH01000001.1| GENE 2064 2118443 - 2118796 246 117 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_1122 NR:ns ## KEGG: EUBREC_1122 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 1 117 1 117 122 213 86.0 2e-54 MMKTLNDYLAMSYRMEIVEDKDEGGFVVSFPDLPGCISCGETVESAVANAMDAKKEWLAA ALEEGVKIHEPDSLEDYSGQFKLRIPRSLHRSLAVHSEREGISMNQYCVYLLSKNDA >gi|333758476|gb|AFIH01000001.1| GENE 2065 2118901 - 2121288 2259 795 aa, chain - ## HITS:1 COG:alr4487_2 KEGG:ns NR:ns ## COG: alr4487_2 COG0463 # Protein_GI_number: 17231979 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Nostoc sp. PCC 7120 # 192 467 2 236 519 162 34.0 3e-39 MRAKIDIALVREGKLHIQGWAFGRDPETPVKLSIQGKGGEKREFSYEEVERETVNEAYFP KYEEENGKKIQRKLGFSLDTPYALSKGERVELLIQVDQQLRRFSFDDKKIESFNSHAHKK MEKFLALFQWETVEAVKDTLKKGGLSALWHKSVRKLKSIEQDYDYNEWYKKEKTGAEELS RQRAEVWENPLLFSIVIPVYRPKEAFLRRLLDSILAQTYPHFEICLADASELSGDTLENG EKSPVSVLQEYQEKDSRVRFSVLPKNLGISGNTNAAIAMAKGEFIIFSDHDDELTEDALY TIAKTIKKHPKAELLYSDEDKIDFASAYYFEPHFKPDYSPELLRSVNYFCHLLIAKRSLL EAVAKEGEAGEKIYEQKEYDGAQDYDLILRLCEEAERREKATGLSDEEKKAQEEALFTSS TIIHIRKVLYHWRSHQLSTAQNPEAKLYAFTAGERAVFDHAKRLGLPIEKVERGITYGYY HCHYALEKKDGELPLISVIIPSKDHSEDLDLAIRSLFAGSYSYLEVIVVENNSVEEKTFS YYEKIQEEFPARYGDFQKKAVRVVRWEREFNYSAINNFGVSFAHGDYLLFMNNDIECLKA DSVEEMLQFVQQEEIGICGARLLYPDKMIQHAGVVMGFGGIAGATFIGTHETENSYMHRA ACIQNYTAVTAAVLMTKKSLFDKVGGFREELAVAFNDVDFCLKIRALGKRVVYTPYALFT HYESKSRGLEDNPEKVKRFNGEIVCLAKHWPEILRKGDPYYNPALTLRKSNFTLRDLSVE KVGEPFPLEILKDIV >gi|333758476|gb|AFIH01000001.1| GENE 2066 2121293 - 2122390 1004 365 aa, chain - ## HITS:1 COG:lin2695 KEGG:ns NR:ns ## COG: lin2695 COG0463 # Protein_GI_number: 16801756 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Listeria innocua # 3 307 2 306 315 157 31.0 3e-38 MKKTISIVIPCYNEEENVIPLANALRTCFQEKLQNYHYELLFIDNDSQDKTRENLRALCR EDKGIKAIFNAKNFGQFNSPYYGMLNSTGDATILMAADFQDPVEMIPKFVEAWEEGYRIV IGVKTESNESKLMYALRGIYYKLIRKMSSVDQISQFTGFGLYDKGFISVMQSLDDPTPFL RGIVAELGYRRKDIPYMQPKRRAGVTHNNFYTLYDAAMLSFTSYTKVGLRLAVFFGGIFA GISMLVGLVYLIMKLIWWDRFPAGMAPMLIGMLFLGSVQIFFIGLLGEYILSINQRVMKR PLVVEEERLNFSEQAEQATGESSTSEQAISGDSSSEQPAQDACESSTSEQATKVSSSIEK ASIEE >gi|333758476|gb|AFIH01000001.1| GENE 2067 2122449 - 2123708 969 419 aa, chain - ## HITS:1 COG:MA1901 KEGG:ns NR:ns ## COG: MA1901 COG1063 # Protein_GI_number: 20090751 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Methanosarcina acetivorans str.C2A # 19 419 4 356 356 219 35.0 1e-56 MSMYMSCIVYYEKRKEVAVRAFVLEGRGKVKWMEKEKPSLLSEHGVLIMPLLLAPCTSDV HTIWQGSPKRENLTLGHECVGKIIEKGSAVKDFSVGEIVAISAITPNWDSEEVTENESHA GYPFSAHSLGKSIDGAFQECFYLPHADKNCGKIPEGLSLEDALLCTDVLQTGFTAAEEGR VERGNTVCVLGIGAIGLAAIFAAQYFGASRIFAVGSREESKRLALSMGTKDCPVEVLDYR ELRTPLPEGKHPLANSTNSPIVNEIWNRTGGKGVDRVLLCGGDEYALCEASDMVKYGGGV VSNVAYFGADEAVVEEELSGRPLHYLIDGEEREKKAVDALYLPKFSLGKGMAGKSFVFSL SKGGRAHLEKIMKIVREKDFHPSAFFTKSYRGMENIEAALYDMKNREAVKVLVYSDLEE >gi|333758476|gb|AFIH01000001.1| GENE 2068 2123810 - 2125039 1095 409 aa, chain - ## HITS:1 COG:SMb21062 KEGG:ns NR:ns ## COG: SMb21062 COG0500 # Protein_GI_number: 16264389 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Sinorhizobium meliloti # 100 387 118 386 399 84 27.0 5e-16 MANCIVCGEKLFELAVFHNMPASAQDFPRKEDLEREKPVDLPLCQCLHCGLVQFDTEPVP YYKDVIRAGGGTTTMRRLREEEYTKLLSYLQNKGQREPVILELGSGQGEFLKMWEGVECG ALTPYTFGIEHKKSLVEKGRAAGLPLYEGFPEEDFSLKGLTALSPDGKQEKEVGEEVDAM VQFNFLEHQKDPKGMLDYAYTHLRAGGIFLLTVPSFHYILENKSYYELLRDHISNFTEES LQYLSQEAGFSLLESRVINRDTIEFILQKEAKENLSIFRYSGQKIDISPLLENEKEIQED VEAHIAKLKEKGERIAIWGASHQGLTLLSTTALKDAVSYIIDSAPFKQGLYSPASHVLIV PPKHFQEEPVEEILIVAPGYTDEIAGIIKRDFQPCPRILALRGERITEL >gi|333758476|gb|AFIH01000001.1| GENE 2069 2125091 - 2126251 751 386 aa, chain - ## HITS:1 COG:no KEGG:Closa_0572 NR:ns ## KEGG: Closa_0572 # Name: not_defined # Def: NAD-dependent epimerase/dehydratase # Organism: C.saccharolyticum # Pathway: not_defined # 1 376 1 309 312 116 28.0 2e-24 MRILISGITSFLGISTGKALLKKGHEVYGILRPESRNKERLKGEKGIQLLSLNMESFLLW EKEHGIEAEYNNSTTEAGITTERNATSENLSPVSPAPFSELHFDAVLHFAWDGVGSLGRS DIATQEKNLRMSKAFFSWAKAHGVKRFFFAGSQAEMGRGTREEPLPASPYGEKKLAFSEY GLKNHGKMEFIDLRIYSIYGKGDHERSLVKTLVRNTLRGMETELGSGNKIWNFMAEEDFG RALAFLTDLDIQTRKEESRKQGSKKSESADSETEYKEKQLESGLSGQGKDCGSFTIDICS RESRLLSDYIKEIEQIGFSFLKKKGIRKSEESLLRFGLRPPNVEGDYDFTAHTKELSALG FEERVSFSSGIEELYEWIYEKEFLKV >gi|333758476|gb|AFIH01000001.1| GENE 2070 2126252 - 2128435 2208 727 aa, chain - ## HITS:1 COG:aq_451 KEGG:ns NR:ns ## COG: aq_451 COG0028 # Protein_GI_number: 15605942 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Aquifex aeolicus # 3 694 4 562 585 212 27.0 2e-54 MKKRLADYIAEKLVEAGICRSFSVVGGGAMHLNDALGHNKGIQTLYQHHEQACAMAAESY ARVHNVPALLCVTSGPGGTNTITGVLGAYLDSLPMIVLSGQVRHDNTARWSGRALRAMGD QEFDILQSVSCMCKYSEMLIDPYRVRYAIEKAIYLSQTGRPGPCWLDIPVDVQGCMIETE DLLGFDVSDFENGGDGWEKRAVENKHPEFATALRKYFQDEEEKKALHALYAKKENPHVLA EDLGGQEDHGFTEWEDFLPLAKQVLEKIRESKRPIFYTGNGIRIAGAETMFLELSEKLGI PVVLGWNAPDIFPTKHPLNAGRPGGRGDRPGNLAVQNADCILSIGSRLNIRQVGYAFRDW APEAYVMQNDIDKEEIAKPSVHCDLQLHGDAKALIRALLELLKEEKSLPLFKGGEGIVRA EARKFIREKAAEAVLEEDKSERLTWLDTVRFYQANYPTILPEYRSEETAECNVYALVEKL SERAEENQITAVGNGSPCVAGGQSYIIKKGTRFISQDGVASMGYGLPAGIGAYCAAVDFT KEEAERLKKTPYWQGKEESYPPYQEKDIIVLTGDGSIQMNLQELQTIIHHKMPLKIFVVN NGGYHSIRQTQNSFFGKPLVGIGVDSGMEGEGTDLSFPSLEKLAYAYGYPYISIHSNKEL SEGIEKTLSQEGPVLCEVFVSLTQQFLPKSSAKRDKDGNLFSPPLQDMDPFLPEKEMEML MLLKKRQ >gi|333758476|gb|AFIH01000001.1| GENE 2071 2128440 - 2129282 623 280 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227871756|ref|ZP_03990162.1| ## NR: gi|227871756|ref|ZP_03990162.1| hypothetical protein HMPREF6123_0101 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_0101 [Oribacterium sinus F0268] # 11 275 3 266 271 237 50.0 6e-61 MEEDREEMGRESEIIFLDLQGGYRELSLTEGIRVENCSPNSFREALKKEKFSPYGLHFFD SADYHFLTKYFLDGLSEEFLLLLFDHQADLKRGEGEELSHRSWLREVMVSVPRCKGILLL GTPEKEKAEINDALMSLSDEYRPRRESHLKDARAEKMDLNREKEAFRDPILNTSLYCFTD GDFQSGRVKTHLPRLLKMLDLPLYCSMDKKILGERFTEKEFDEGISYVLEAGVKILGMDI FEDGNIKKQSEEEKNARLFNEKLISNYHINHHGLFLERKD >gi|333758476|gb|AFIH01000001.1| GENE 2072 2129365 - 2130126 553 253 aa, chain - ## HITS:1 COG:BH0167 KEGG:ns NR:ns ## COG: BH0167 COG0101 # Protein_GI_number: 15612730 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthase # Organism: Bacillus halodurans # 1 242 1 238 263 193 44.0 2e-49 MHRFVLKLAYEGTNYHGFQRQEELRTVSGEVEEVLSRLFPGECQNFIGASRTDQGVHALG NILSFDTEAERNPENYERALNSYLPEDIRVLSAWKKTEDFHPRFTTHTKEYRYSIDRARV ENPLFQRLYYHYTFPLDLVKIREGIEILKGEHDFTSFANPKAQTLLQGGSAVRCITDFRL EEEGEYLYFTVKGNGFLYHMIRILCGTLLEVGRGRISPSALSEILAGKDRRLAGPTAPAK GLCLLHLDYGDAL >gi|333758476|gb|AFIH01000001.1| GENE 2073 2130308 - 2131114 777 268 aa, chain - ## HITS:1 COG:CAC3100 KEGG:ns NR:ns ## COG: CAC3100 COG0619 # Protein_GI_number: 15896351 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Clostridium acetobutylicum # 1 245 1 247 267 235 50.0 8e-62 MLREITLGQYYPVDSFIHRLDPRVKLAGTFLFLIALFIVNSWTAYAVLALVLFGFILLSK VPFSFMVRGLKSVLFLLLLSVSFNLFLTPGEELFRIFFLKMTKEGLQIASMMAIRLVMLV LSSSILTLTTTPNALTDGMEKGLGIFKVFHFPVHEIAMMMSIALRFIPILVEETDKIMKA QMARGADFESGSIFDRAKAMVPILVPLFVSAFRRAYDLAMAMEARCYQGGEGRTKMKPLH YTKADYLSYLVLFLILGLAIGSRFISLP >gi|333758476|gb|AFIH01000001.1| GENE 2074 2131107 - 2133032 384 641 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 343 612 146 383 398 152 35 6e-35 MFREQECALENIVVKEVSYQYTRRNENDEVIETLSALSALDFSIETGSFVCILGHNGSGK STLAKLFNALQLPTEGTILVSGMDSREEKNIFPIRREVGMVFQNPDNQIIASVVEEDVGF GPENIGLPTDEIWQRVNNALSAVHMEAYRLKSPNHLSGGQKQRVAIAGTLAMEPKTIVLD EPTAMLDPSGRKEVLESVLELKRKKGISIILITHYMEEAVDADRILLMDSGKLVMDGSPR EVFQNVERLKEYRMDVPLITELAHKLQKKGFPIEKTILKKEELEEELFKLKEEGFSLQES FTALELPGLSELSSKKPQADDYIVEVEHLSAIFQEGTAMESYALKDLSVKIRRGSLTAVI GHTGSGKSTLVQHLNGLIKAKSGEIFVSFRENPPLVKSGKSFLFFKGKKTVIEKKGRLSL SEEGFDYRALRFKVGLVFQYPEYQLFEETVLADVMFGPLNQGKSREDAEALAKEALASLG IGEELYAKSPFELSGGQKRKVAIAGVLAMGPELLILDEPTAGLDPAGRDELFEEIAGLRK NYAMTILLVSHSMDDVARYADEVLVLHQGELKIEGTVEEVFSKKEELESMGLGLPQIRAL LYDLKKKGLEIPLGNTVSEAVQALSTYFSVGFSEGKGVSYA >gi|333758476|gb|AFIH01000001.1| GENE 2075 2133119 - 2134207 1074 362 aa, chain - ## HITS:1 COG:RSc2515 KEGG:ns NR:ns ## COG: RSc2515 COG2206 # Protein_GI_number: 17547234 # Func_class: T Signal transduction mechanisms # Function: HD-GYP domain # Organism: Ralstonia solanacearum # 75 329 99 344 402 179 36.0 6e-45 MEEKIFVQREKIEVGMQLGESIKDSMGRVMIENGVYLDEYQIRYIKEKMYPGIYTYRFVD DKAVPIPEATKKIIRQHRKPDRAKIQLSAQVKQQLEERMNHIFEHTEDEDFTSNSLDIFG ELESAIFKNDAVAIDVNMIKISDEYTFKHSVDVAAISMMIGREYGMAKEEIHHLGITGLL HDVGKAKIPNEILNKPGKLTDEEFETIKNHSLYGYEILKEKNNFSALILDGVLHHHEKMN GLGYPDQLLGKDISLFSRILSVADIFDALVTKRPYKGPISGREAMEMVLALGSELDNTVI QSFIESVILYPVDSIVELSNGEMAKVVENNKRYPTRPKVVEIQTGKIYNLSEDHSCNNIV VL >gi|333758476|gb|AFIH01000001.1| GENE 2076 2134466 - 2136136 1086 556 aa, chain - ## HITS:1 COG:no KEGG:Closa_4081 NR:ns ## KEGG: Closa_4081 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 3 552 7 550 552 551 49.0 1e-155 MTTYQFVLVDALEKVLPNQEPEKMDRSVLKGYAGERLSFQLAYSCQNDDRGHSGRHFRIE VISDLKAQIRLRKVGLVPCAYPCHGVADENYLSREAGLYPDVLLPFSEEEIKAVPGQWRS LWIDLDLGEGNIHPGKYPIQLILSDAPGNRLQEYTLFAEVLEGNLPEQTLLHTEWFHADC LADYYRVPVFSEEHWRIIENFMKTAVRCGVNMLLTPIFTPPLDTAKGGERTTIQLVDILY QDEKYSFKFEKLHRWISLCRKHGIQYLEISHLFSQWGAVAAPKVMAQTEEGRECKLFSWD SPAVGGEYTEFLKVFLPELKAFLKEENILENSYFHISDEPNEDNMDSFGAAVESVRELLA DCKVMDALSSFEIYRRGYVQRPVVAVNHIEPFVEAGVKNLWAYYCTGQAVDVPNRFIVMP SARNRILGVLCYIYQVEGFLHWGFNFYNSEKSIEHIDPYAVTDAGEAFPSGDPFIVYPGK DGTAYESMRSVVLEEALSDIRVLKMAEQSLGRDSVLKGIEETAGMKLSFMHYPKDKSFFT ALREWVEKSLQEDTGC >gi|333758476|gb|AFIH01000001.1| GENE 2077 2136141 - 2137100 727 319 aa, chain - ## HITS:1 COG:Cgl2203 KEGG:ns NR:ns ## COG: Cgl2203 COG0647 # Protein_GI_number: 19553453 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar phosphatases of the HAD superfamily # Organism: Corynebacterium glutamicum # 65 310 7 252 275 260 50.0 2e-69 MNAIGKAYGIPFIVNAIGKAYGIPFIVNSVGKAYDNVFTAGMKKVPVCSMDKEKYMINFN EMKGFISDMDGVLYHGNTLLPGVKEFVQWLQEEGKEYLFLTNNSGLTRRELKQKLERMGL DVPEERFYTSALATAAFLKEQSPGCSVYAIGEAGLLNALYDAGITMNDVNPDYVVVGEGR TYSLETVTRATNLVLNGAKLIGANTDVSGPTEDGISPACGALIAPIEIATGQKAYFCGKP NPLMMRKGLRILNCHSGEAVMIGDRMDTDVISGLESGMSTVLVLSGISDEETVKQYAYRP SIVLNGVGDIVKKAKEDLG >gi|333758476|gb|AFIH01000001.1| GENE 2078 2137277 - 2138320 1129 347 aa, chain - ## HITS:1 COG:TP0053 KEGG:ns NR:ns ## COG: TP0053 COG0208 # Protein_GI_number: 15639047 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, beta subunit # Organism: Treponema pallidum # 4 347 8 351 351 511 70.0 1e-145 MEEIKRKPLFNPEGDIDVRNRRMINFNTTNINDFNNMKYEWVSDWYRQAMNNFWVPEEIN LNQDKSDYPNLTAPERTAYDKILSFLVYLDSLQSANLPNISQYVTANEVNLCLSIQTFQE CIHSQSYSYMLDTICNPTERNDILYQWKTDEHLLRRNEFIGNLYNEFVEAQTKESFLRVC IANFILEGIYFYSGFMFFYNLGRNGKMPGSVQEIRYINRDENTHLWLFRNILLELKKEEP ELFDEKHIEEITAMIKEGVEQEIAWGQYVIGEAIPGLNGKMVEDYIKYLGNLRYSSLGFG TLYPGYEKEPESMKWVSQYADANMVKTDFFEARSTAYAKSTAIEDDL >gi|333758476|gb|AFIH01000001.1| GENE 2079 2138628 - 2141138 2637 836 aa, chain - ## HITS:1 COG:TP1008 KEGG:ns NR:ns ## COG: TP1008 COG0209 # Protein_GI_number: 15639992 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, alpha subunit # Organism: Treponema pallidum # 4 836 3 845 845 1001 57.0 0 MKTIIKRGLGEEDYRGEKIEKAMEKAFLSEGIAVEAEKLHFLLGKVEEALEDKFRVSVEE IQNAVEESLMQNGDYRVARAYILYREKRTLLRHLRQRIKEEIGEEGIEEVLKKIQKDFPD YDLSRLSAKYLSLSKGEQEIPKRLALLTRAAAELTTQEEPNWEKIAGRLLSYHFHKELKR TEESRALHGFYEKLCYLTEQGLYGSYILEAYTKEEVEELEKVIDEGRNDLFTYSGLDLLL SRYVIRDRQHIALESPQEMYLGIAMHLAMKEEKNRAFYVKEFYDIMSLHQVTMATPTQSN ARKPYHQLSSCFIDTVADSLDGIYQSISRFADVSKYGGGMGMYFGKVRSRGGKIRGFEGA SGGVIRWIRVVNDTAVAVDQLGMRQGAVAVYLDAWHKDLPEFLQLRTNNGDDRMKAHDVF PAVCYPDLFWKKVKEDLNQEWYLMDPHDIFLIKGYCLEDFYGEEWESRYEDCVRDNRISK RVYVLKDIVRLILKSAVETGTPFAFYRDTVNRMNPNKHKGIIYCSNLCTEIAQNMKEAEI LERKVITEEGDEVIVSTVKPGDFVVCNLASLCLGNIDVENKEELQKITKTVVRALDNVID LNFYPVKEAELTNKKYRAIGLGVSGYHHMLAKHHIAWESEEHLRFVDTVFENINFAAIKA SAELAKERGSYREFAGSEWETGEYFRRRDYSSSEWKALEKEVHEGIRNAWILATAPTSST SILIGTTAGLDPIMNRFFLEEKKGAILPRVAPELSMESYWYYKSAHQIDQTWSVRAAGLR QRHIDQAQSVNLWITNDYKMSELLNLYTLAWESGVKTIYYVRSKALDPDECESCSA >gi|333758476|gb|AFIH01000001.1| GENE 2080 2141537 - 2141887 359 116 aa, chain - ## HITS:1 COG:no KEGG:DSY1255 NR:ns ## KEGG: DSY1255 # Name: not_defined # Def: hypothetical protein # Organism: D.hafniense # Pathway: not_defined # 3 115 18 130 130 73 44.0 3e-12 MTKTEVKQEVEKLLKANSLCPEGREAVQAYLEAYGTADEKSKAEALLQELEEDITSIDDL IAFAGSEHGRQIFGEEKAAAILKAAKEAKEKGEETCICEACQIAKVILANRTALLS >gi|333758476|gb|AFIH01000001.1| GENE 2081 2142378 - 2142677 146 99 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MEESSMGSSPHTRDKCVYEFLMTNKTRITPAYAGQMKFLVRRFLKQRDHPRIRGTNIKEP SARPSCKESSPHTRDKFQKIFCHKNNCGITPAYAGQMHH >gi|333758476|gb|AFIH01000001.1| GENE 2082 2143289 - 2144020 542 243 aa, chain - ## HITS:1 COG:TM0576 KEGG:ns NR:ns ## COG: TM0576 COG2176 # Protein_GI_number: 15643342 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit (gram-positive type) # Organism: Thermotoga maritima # 131 232 358 458 1367 77 42.0 2e-14 MPMTVITLSKVSNSLKGDLSKWMQEIATGVYIGNFNSKIRDKLWERIQDAVGSGEATISY PMRNELGYTFNTLNTRREIYNSDGIPLICFPLETEPEGDDEGIKEGFSNASKYYKARKFA NNHSGEKKECYAFLDLETDGLKEQYNSIIEIGAVKVMQDSGILGYHSLLEYEGELPNEIT GLTGITTDLLKREGRKVEIVLKEILDFLEGAIIVGYNIAFDLRFLNAILQKMAWKSYIIL LWI >gi|333758476|gb|AFIH01000001.1| GENE 2083 2144011 - 2144967 481 318 aa, chain - ## HITS:1 COG:ygbT KEGG:ns NR:ns ## COG: ygbT COG1518 # Protein_GI_number: 16130662 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair # Organism: Escherichia coli K12 # 14 288 6 278 305 211 40.0 1e-54 MNKNRDAYVKKVELNELPRIGDRVSFIYVEHAKIHRQDSSITVADQHGIVRVPVSMIGIF MLGPGTDISHRAMELLGDTGTSVLWTGERGVRQYAHGRALSHSSRFLEKQADLVSNTRSR LQIARKMYQMRFAGEDVSKLTMQQLRGREGARIRTVYRNMSKEYHVAWDKRDYDPEDFFD ATPINQALSVANVALYGLAYSVIVALGLSPGLGFVHTGHDLSFVYDIADLYKAWTSIPVA FQTVSECLEEENLPREVRKKMRDIFTETKLLERMVKDIQNLLEVEEDQFFEVDSINLWDD KERLVSYGVNYSEDSSCR >gi|333758476|gb|AFIH01000001.1| GENE 2084 2144972 - 2145604 362 210 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0424_0764 NR:ns ## KEGG: HMPREF0424_0764 # Name: casE # Def: CRISPR system CASCADE complex protein CasE # Organism: G.vaginalis # Pathway: not_defined # 2 210 3 213 215 209 50.0 7e-53 MYLSRVEIDKENRRKIRDLTHLGAYHSWVEDSFVGQISMLERSRKLWRIDSIQGRQYLLI LSEEKPSLKALEKYGVDGSGETKSYDSFLASIQEGKKYRFRTTLNPVVAKPIEGEKRGKP VPLLTIENQSRFLLDRAEKNGFSLNSSDFVIKERKFETLKKKGMRDTPISQVIYEGILTV IDAEQFRKALCDGIGKKKAYGCGLLTVIPV >gi|333758476|gb|AFIH01000001.1| GENE 2085 2145792 - 2146355 187 187 aa, chain - ## HITS:1 COG:no KEGG:SmuNN2025_0607 NR:ns ## KEGG: SmuNN2025_0607 # Name: not_defined # Def: hypothetical protein # Organism: S.mutans_NN2025 # Pathway: not_defined # 1 169 1 166 238 211 61.0 1e-53 MKTILLKFTGPLQSYGTSSHFETRYTDYYPSKSAVIGLLAACLGYRRDEAENLRELSKLK FAVRIDQDGTLLRDYHIARSYNEKGVESKTYVTNRYYLEDALFVVALSGMDELIDTLIEA IKTPYFQPFMGRRSLPVPVDFFLGVSTEDILDSLRNLPWQAAPWYKKRKKNKVLERRYLW KSMRMRR >gi|333758476|gb|AFIH01000001.1| GENE 2086 2146366 - 2147445 616 359 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0421_20673 NR:ns ## KEGG: HMPREF0421_20673 # Name: cse4 # Def: CSE4 family CRISPR-associated protein # Organism: G.vaginalis_ATCC14019 # Pathway: not_defined # 6 359 5 361 362 379 55.0 1e-103 MSKEKLFLDIHVIQTLPPSNINRDDTGSPKTAVYGGVRRARVSSQSWKKAMRDYFKENGN FSNVGVRSLDVVSFLAEKIRELKPEISLEDAIQRSVKVFNEAGIKTTKNNRVKALFFLGK EQAENLAKKAVEKKYNKEELRKVFKEKAAIDIALFGRMLANDKELSENASSQIAHAISTH GVQTEFDYFTALDDLSKDAKPGAAMIDTIEYNSSTLYRYGNVALHEFFHQLNENKSQTIE ATKLFVEAFLNSLPTGKMNSFANQTVPSSVVISLRKDRPVSFVSAFETAVKTKLSQEGYV DESIEAMFKEYKNVQRFVEKPEISFYLNLSEGHSLEGAKEELSLSNLLNDLGAELKNRL >gi|333758476|gb|AFIH01000001.1| GENE 2087 2147438 - 2148040 458 200 aa, chain - ## HITS:1 COG:no KEGG:SmuNN2025_0605 NR:ns ## KEGG: SmuNN2025_0605 # Name: not_defined # Def: hypothetical protein # Organism: S.mutans_NN2025 # Pathway: not_defined # 28 199 12 181 183 154 48.0 1e-36 MDEERKSVDAVMRKIIGEIEPIKTLGSGKALLAGIRDSIGKELTNAPQVWPLLFENLPEE YLGDKARITAEENAIYLSLQIYALMQQGASKSERGEVKSTRNIGESLRILRGDESKAKAM DERFNTMVTAGSFEELAHYLRQMVKILKANIDTPSVDYPKLAKDLFWMQKGKQDNILMDW ARAYYQTFQKSTVEKENTNE >gi|333758476|gb|AFIH01000001.1| GENE 2088 2148054 - 2149763 530 569 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0421_20671 NR:ns ## KEGG: HMPREF0421_20671 # Name: cse1 # Def: CSE1 family CRISPR-associated protein # Organism: G.vaginalis_ATCC14019 # Pathway: not_defined # 1 566 1 552 556 405 40.0 1e-111 MSRFNLLEENWIRVLEEGEMKEVSLITLFENAEKYRCLAGEMATQDFAMLRFILAVLHTV FSRVNADGEAYEFLEIDEKFRQKEAVSEDDEEEYNDALMETWKTLWQRGKFPSVVREYLE AWKEHFYLLDEKYPFYQVTKEEIDSLPRNYQNLGPILGKQFNRTISESNNKVALFSPKLE EGKSKMLESELARWLIMLQGYFGNFDKVKFCQEYTPSIGWLYELGGIYLRGQNLFETLMM NFKITVEQVGEEIPRQSPCWENSGVENIKRAFHGVEDNLAALYTNWSRAMLVNPELNFFE DILVEVVKLPKLDYSIMEIEPMTLWEYDMKGDNKYNFVPKCHEPNQALWRSYGSIAIPDE IIQIGKEPGIITWLNKIRPYFYSHKLMISAVGIQDDGIDASRMMVNEINDDLALHEIVLF EKGVEGWVARIKGIVDETKEIISTKYRKYLKDIAELRRKKSYEGGNNKKKIEDKNLTIYL EDNLKQIYFEIDKPFRNWLIGIEISSKKEEKAKEWKDFLIRFIKEHAFQKIKEADARDIQ GTYIEDGKIIINIFTIYESFCHELKKYEI >gi|333758476|gb|AFIH01000001.1| GENE 2089 2149767 - 2151296 758 509 aa, chain - ## HITS:1 COG:ygcB KEGG:ns NR:ns ## COG: ygcB COG1203 # Protein_GI_number: 16130668 # Func_class: R General function prediction only # Function: Predicted helicases # Organism: Escherichia coli K12 # 7 253 421 669 888 145 34.0 1e-34 MLDDFIVGTVDHLLLMALKQKHLMLRHLGFSKKVVIIDEVHAYDAYMGQYLYMVLQWLGA YKVPTIILSATLPIERRKDLMKYYLKGRGIKEKDIGNFDFLKAESYPLLTFSKGSEVESF SDFQEEKEKKVTLYQLDEENLVDTVKSLGKNGAVIGIIVNTVGRAQRITKDLLEAFPEEE VHLLHSRFIDTDRIKKEEELLKKIGKNAERPKRFIVVGTQVIEQSLDIDFDLMISDLCPV DLLIQRIGRLHRHKIERPKEHSEARLYLMGISESFDFEKGSRRVYGDYLLIKTQCALGKS ISIPRDISPLVQEVYGEWNPSLAPDLRKKYEESKEKQNETLDKQKRKAEGFRLDKPKLEC SDEISLNGLLDNTYIDSEELCQAKVRDIGSSIEVIAVKKYGAGYGLFQEQKDISEELSKA SIARKLACQTLRLGESIIHMEKDKEDNKEEDLIRYLEDYNRRELPEWQNEAWLKGSLGLI FDENNDFPLKNIVLHYDEKFGLQWHKKEV >gi|333758476|gb|AFIH01000001.1| GENE 2090 2151326 - 2152585 712 419 aa, chain - ## HITS:1 COG:ygcB KEGG:ns NR:ns ## COG: ygcB COG1203 # Protein_GI_number: 16130668 # Func_class: R General function prediction only # Function: Predicted helicases # Organism: Escherichia coli K12 # 143 406 156 393 888 67 24.0 5e-11 MRSGLELWAKKKEKDGIFYWLSLKRHLEDTREIMGLLWEHWLSEGQRVYITKSMKVEEDE AKSLAMFVGAIHDIGKATPAFQIQRGFQNSEDLDFLLLEKLERKGFSGIKDLELTDRGKT PHAYAGEVICRLAGMNRGIASIIGAHHGIPMKENYNLTSFIEAYTANFYQEEKEDSQICK KWKDTQENLLSWALESCGYKKVEELPVCPKPTQLLLSGLLIMADWIASNEEYFPLFSLQN EVDHELDDATVNQEDRKKEGTQISERVESAWLKWTQNQTWEAKQLFDANQSYQNSFHFMP RDFQEKVFTEIAGAEDIGLVILEAPMGCGKTEAALMTAEQLAGKQQCAGVFFGLPTQASS NGIFPRVESWVDSLGQENQEKLSLRLSHGKAALNEEFQTLSRNCSEGIDPDGEKRSMCM >gi|333758476|gb|AFIH01000001.1| GENE 2091 2152916 - 2153800 500 294 aa, chain + ## HITS:1 COG:no KEGG:Selsp_0303 NR:ns ## KEGG: Selsp_0303 # Name: not_defined # Def: hypothetical protein # Organism: S.sputigena # Pathway: not_defined # 14 256 10 256 295 149 35.0 1e-34 MSKKSINLKFSTEQDLKRKFLAELILMDDIFMRVVLKDVKCTEFILQTILEKPELKVKSQ SIQSDLKNLEGRSLVLDCLCTDKEGTIYNIELQNDSLGASPKRARYHSGLIDMNISKKGK SFDYLPESYVIFICGRDILKGDKQIYHISRIIKESGADFPDQTNIIYLNTSKSSSNDLGK LIEDFYTADPQKMHSKILAKRVSRLKIAENLEKGDEKAMTTYYDRLKRQWKKEGTEEGMA KGMAKGLAEGLEKSEDIMAKLMGILVKEGRIDDLAKASEDKSYRKSLLKEFQLI >gi|333758476|gb|AFIH01000001.1| GENE 2092 2154063 - 2155295 1313 410 aa, chain - ## HITS:1 COG:SA1935 KEGG:ns NR:ns ## COG: SA1935 COG1473 # Protein_GI_number: 15927707 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Staphylococcus aureus N315 # 15 400 4 386 394 325 42.0 1e-88 MGKKGIEEAQLSDREERIVKKVEKEGKLFQNLALAIHKKPEVSNYEFFASEELSKTLSSF GFFVEMPAAGHRTGFAASYKSKKKGPVVVFLAEYDALEGLGHGCGHNLFGTTASLSAVAL KEVIDEVGGEIRVYGTPGEEGGEEGSAKGSFVREGYFKDVDFALCAHPADEHKRTGRNLG CVPVDIEFWGKSAHAAGEPEEGINALDALIQTYNSINALRQHLTDDTRIHGVILSGGSAP NVVPDYAHAKFYLRTSAKPSLEALYKKVENVVVGSALSMGAKGRMKAYQNWVENIVPTPS FDDLYEKHLNRFGEQFTPCDWKALQMGSSDVGNVSQVVPTIQPSICISKKKIPAHSPEFV KASCSNLGLASILLGAKVLAFTALELLEEPETLKKIKAEHKEQVKRQLEF >gi|333758476|gb|AFIH01000001.1| GENE 2093 2155381 - 2156289 1146 302 aa, chain - ## HITS:1 COG:SMc03157 KEGG:ns NR:ns ## COG: SMc03157 COG1464 # Protein_GI_number: 15966641 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Sinorhizobium meliloti # 61 301 22 258 258 169 41.0 5e-42 MKKRILALGLTVALAAASLAACGGASTKTTEKKAEAGTEQGSEKATEAAKEEKADAGELR TYKLGVNGSDHEEWEKANELLAKDNIKLEMVEFSDYVKPNEALEDGEIDLNAFQTEIYFN NFVKERGYTDLGILAYTQVAPMGIYSSKYKSLDEATGHLIIAIPNDVTNGGRALKFLEKN GFLTLKKEAGLTPTVMDIEKYNKDVEIVEMVATQIPASLPDLSFACINNGVAKDAGLTLK NDAIVYEDYKEPDMKNYWNIIAAKKDRIESEDFQKIKKAYNSDEVKQVVLEHYDGQSIPV WD >gi|333758476|gb|AFIH01000001.1| GENE 2094 2156328 - 2157008 899 226 aa, chain - ## HITS:1 COG:BH3480 KEGG:ns NR:ns ## COG: BH3480 COG2011 # Protein_GI_number: 15616042 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, permease component # Organism: Bacillus halodurans # 15 226 7 218 218 149 39.0 4e-36 MEWLNSMFPNVAKLWPYIVKSLNETLIMVSISGVFAAVLGVPLGIVLAVTKKGELLSFPP LYSILSKIVNTVRSIPFVILIASIPWLVRAIVGTTIGMKGAIVPLIIACIPFMAKQTELA LQSIDKGVIEAYRAMGFSEIAIIFKVMLKEGFSAIIQAVTIMLVGLISYSAVAGSVGGGG LGDFAIRYGYGQNKTDVMFLTIVIMLVMVFFVQWVGDSLSKLVSHR >gi|333758476|gb|AFIH01000001.1| GENE 2095 2156996 - 2158063 1111 355 aa, chain - ## HITS:1 COG:YPO1073 KEGG:ns NR:ns ## COG: YPO1073 COG1135 # Protein_GI_number: 16121374 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, ATPase component # Organism: Yersinia pestis # 3 339 1 341 343 305 46.0 1e-82 MGIIELKNIVKTFPSEKVGEGVHAVRDVSLTIEEGDIFGIIGYSGAGKSTLVRCINLLEK PTSGEVIVEGKNITAYSEVELRAVRRRMGMIFQHFNLLNSANVFENIAAPLKNQGRISGK EIRERVEEMLRLTGLEDKARAYPSQLSGGQKQRVAIARALVGRPRILLCDEATSALDPNT TTQIIELLRSLQEKLKLTVVMITHQMEVVKSICNKVAVMEEGKVIEEGSLVEVFSEPKSS ITKEFREKTLYRKEAIALAEKNKRNLYELTFIGEKANDPAIMDLVRNYPVEVSILFGNIE ILSGVPFGTLTIDMKGEGKDILDAVAYLKSREIKVEELGGHKIEGKREEDKIWNG >gi|333758476|gb|AFIH01000001.1| GENE 2096 2158262 - 2159257 708 331 aa, chain - ## HITS:1 COG:lin2285 KEGG:ns NR:ns ## COG: lin2285 COG4509 # Protein_GI_number: 16801349 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 145 308 67 226 246 87 32.0 2e-17 MEENRNEENRNEEKKAAGQNIQTIEEKTEDASSGEKKVQEQQPSKRSYKRRRESIIHKII PLVLFISMLVFGGLFLRDFLEYKAADDEYAALEEHIVVQPETVEQKEEKKKEEGSAEEKG SEPETEAPEPVDIAHPKFQINYDTLAKINGDFTAVIYVPAIGISYPVVRSKDNEDYLHRT FEGKANFAGSIFLDANAKGSYDNKNTFIFGHNMKNGSMFGKLKNFLKDPSLADSNPYVFL CKPDGIYRYRIYSYYLTTTESDIYADFEGDSGYDRYVQLTSKLSSYRNYPKGAIDFSTRP NLITLSTCSGPSGGNQRFIVQAAFEELYPNS >gi|333758476|gb|AFIH01000001.1| GENE 2097 2159258 - 2159848 451 196 aa, chain - ## HITS:1 COG:CAC1435 KEGG:ns NR:ns ## COG: CAC1435 COG2265 # Protein_GI_number: 15894714 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Clostridium acetobutylicum # 21 195 314 456 456 137 42.0 1e-32 MYEKIREYANLSDSAKDKPIIFDLYSGTGTITQLMSKVARDAYGVEIIEEAVESAKENAK DNGITNCHFIAGDVLKVLEESAKREETKGENPEKEDANGARNCNGERNLETTVLPHPDFI IVDPPRDGMHRKALDLIIRYGVERLIYVACKPKSLARDLEALQAAGYRVKKLCAVDLFPR TNNCECVCLLEKEGIR >gi|333758476|gb|AFIH01000001.1| GENE 2098 2159743 - 2160573 331 276 aa, chain - ## HITS:1 COG:CAC1435 KEGG:ns NR:ns ## COG: CAC1435 COG2265 # Protein_GI_number: 15894714 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Clostridium acetobutylicum # 8 234 74 289 456 169 41.0 5e-42 MKMAMEWCKNEEYCGGCFYQKISYEEELKKKEEEIRSLFMPIVLGELPFEGILSSPQKEA YRNKMEFSFGDQEKDGPLCLGLHQKRSFFNILNMDDCRLPSPDMGKILTVSRNYFREKGI SYFHKKRHEGYLRHLLIRRAEKTGEILVSLIHASWNPESVQTEEFLLTGWCESLLELEKE GSLEGHFAGILHTKNDSPADAVVNQGTEILYGKDFFYEELLGLRFKITPFSFFRPIVLEL KNCMKKFESMQIFRTLQKINRLSLISIPEPERLPSS >gi|333758476|gb|AFIH01000001.1| GENE 2099 2160748 - 2161038 255 96 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227873618|ref|ZP_03991856.1| ## NR: gi|227873618|ref|ZP_03991856.1| conserved hypothetical protein [Oribacterium sinus F0268] conserved hypothetical protein [Oribacterium sinus F0268] # 1 73 33 105 126 97 61.0 3e-19 MEQWNIENLKDRARRFTEEAKSLSSDFQYALRTRDKHKEEKKTTETICIVLAVISGIILF CGLAYCVYRFLAPNHSDEYDEYDDYDEDSEDFSEEE >gi|333758476|gb|AFIH01000001.1| GENE 2100 2161178 - 2162230 1080 350 aa, chain - ## HITS:1 COG:lin0944_1 KEGG:ns NR:ns ## COG: lin0944_1 COG2333 # Protein_GI_number: 16800013 # Func_class: R General function prediction only # Function: Predicted hydrolase (metallo-beta-lactamase superfamily) # Organism: Listeria innocua # 72 317 36 250 289 63 25.0 8e-10 MNKRFGSLALAVGMSFLLALPTFAEESSTGTIYGNANTEASLSQDKTSGGNAPIYVRNGE ATPTYTDSTIGLGGAKITMIKGNESGQQISIVIESNEGQLIVVDGGLKTNAPYLSKYIKA RGGKVSAWLLTHPHEDHVGALSVILEQQKVAGHPDYYNIDPGQIYFSFAPYSFYEQYEQS YRLPMIKEVMDDLAAYPAEKKHENSERGTTFSYGNVSVEILNTAYSIPIDTGNNSSICYM ITINGKKLLITGDLPYEAAGKLLEELPAEKLKADIVQMAHHGQHGGSFAFYSTVNPRYAL WPSSKELWDKRKEPFTEDQETYTIALTKFWMNKLGVEKNFVMADGNWVLE >gi|333758476|gb|AFIH01000001.1| GENE 2101 2162252 - 2163568 1406 438 aa, chain - ## HITS:1 COG:SP2190 KEGG:ns NR:ns ## COG: SP2190 COG5263 # Protein_GI_number: 15901997 # Func_class: R General function prediction only # Function: FOG: Glucan-binding domain (YG repeat) # Organism: Streptococcus pneumoniae TIGR4 # 252 435 472 689 693 120 34.0 4e-27 MKKRIILVTALLSGIFALPAFAEQLVGRVQVDISPNEDLELEAGATYSKPDARAMDSGYE VSSFSVDGKYNTPKKPYTYTITVKADEGQFFDSSTVVEVRGAYEMAVTEKGKNTIKIKAN AYPYYVLKEPTNFSSDEKSYTWEKVNYATGYDVLVFYNTANGDEKIVKKHSNSPKFNFSS YTQSGKEFDHIAVRAVYDKRDDMAQYFADSLYVDSSGSVEDPDGDSGEYFFNLITLKATG ISKGSFKEYSAKKKKKTKAEREKDNKKRASEKYNGQQNQENPDANGPGEAASGWRQNGAD WYYEANGRLAKGWTKVKDYWFYFDEQGKMLSGWQKIGEHWYYMNGDGVMLSGWQEVGGKW YYFDTEGGAAGQMATSWRQLNDRWYYLDIQNGEMKTGWENIGEKWYFFNVSDADIPVGAM EQNTVKDGFSIGADGVRQ >gi|333758476|gb|AFIH01000001.1| GENE 2102 2163614 - 2164465 658 283 aa, chain - ## HITS:1 COG:SP0117 KEGG:ns NR:ns ## COG: SP0117 COG5263 # Protein_GI_number: 15900059 # Func_class: R General function prediction only # Function: FOG: Glucan-binding domain (YG repeat) # Organism: Streptococcus pneumoniae TIGR4 # 158 282 603 744 744 107 41.0 4e-23 MLSEGLSKDDLTDMINAYCKKVEDAGFIPMVYANRTWLTKYMNLSKISYDVWFAAYPENR VYVPVGGSKTTIWQSSEKGVVKGIKGQVTTEFSWKVYGGGNPSQKNAGKRSSGSNSVSTS SGTSQKTSGNTEKTSTTGSGNGVDGTVVSGEGPGKEAASIENGWVQTVPGQWKYMENGKA TTGWKQVNGLWYFMDARGIMQTGWLFQNNLWYYLKDSGAMAVNWQNVNGKWYWLNQDGAM RTGWKFINNLWYYMEESGAMLENTSRTINGVEYRFDANGAWMP >gi|333758476|gb|AFIH01000001.1| GENE 2103 2164516 - 2165016 413 166 aa, chain - ## HITS:1 COG:no KEGG:Olsu_0378 NR:ns ## KEGG: Olsu_0378 # Name: not_defined # Def: glycoside hydrolase family 25 # Organism: O.uli # Pathway: not_defined # 62 166 153 269 390 72 36.0 6e-12 MVFQKANERFCTRMPIKITKLCFTSICMIMLSCLSPSCAFAVGPGDLIGKTEPAVSTDVV ENTVTDEYAGWYGYTNQDGSDFLYLEKGTEVSRFQNENGPIDWNAAKKDGLDFVMIRLAY GTKEDAYFDANVKGAQKAGIKVGVYLCSTAKNMNDAMAEADLTLKK >gi|333758476|gb|AFIH01000001.1| GENE 2104 2165415 - 2166035 391 206 aa, chain - ## HITS:1 COG:CAC2663 KEGG:ns NR:ns ## COG: CAC2663 COG0791 # Protein_GI_number: 15895921 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell wall-associated hydrolases (invasion-associated proteins) # Organism: Clostridium acetobutylicum # 80 206 129 255 255 80 36.0 2e-15 MQKWNASLCTAGEEPKHFERKGRHSVLQRTKKGILALGIAVFAFSSVPSLSALAAPSEQD DILVFSEDGGMVSEEEQTVEIVVEDNLKGDSRAKGQQVVDYASQFIGRPYRYGGLSLLHG SDCSGFLVGVFGHFGVSLPHSSGAIRSVGTSVGSLENALPGDILAYSGHVGIYLGEGRML SALNSRSGVTIESATYKPIKSIRRLF >gi|333758476|gb|AFIH01000001.1| GENE 2105 2166267 - 2166938 589 223 aa, chain - ## HITS:1 COG:BS_yyaS KEGG:ns NR:ns ## COG: BS_yyaS COG2364 # Protein_GI_number: 16081125 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Bacillus subtilis # 16 196 8 185 201 60 25.0 3e-09 MKNNRVLLKRHASMVLGVFIISIGIALFKESHLGNDPISALNMRIAEIFGIPYGFQNLLC NILFFLIQFIFGRKYIGAGTFVNGILLGYIVSFFYAILLRNFGAAEEHGLIVQIVWAAVA VVVTSLGVSLYQTADLGIAPYDYLSLGLRDKTKKHYFACRMFTDGICALGTFLTGGLVGI GTLISAFGLGPVVHFFDTHVSEKLIGYTPEGEKEEEARDALKG >gi|333758476|gb|AFIH01000001.1| GENE 2106 2166985 - 2168355 1166 456 aa, chain - ## HITS:1 COG:CAC0747 KEGG:ns NR:ns ## COG: CAC0747 COG1376 # Protein_GI_number: 15894034 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 15 455 26 465 466 226 33.0 1e-58 MEEYMKKIKLFLSALLLSVLLPMSAYALDRFVMGTYGNGIPLSEKTVEEAKSYLEGEYSR NYVLYIKGRDKVEEIKGSDIGYQLSAATNLEEILKREEKEGLEPKADGRYDFSLEGSSAK FDEAKLKERIAQLSVLKYSKKTANAYIQKDGTYSIVPEVEGDSLDEAKFYANLYSALQRG ENTLDLTQRGIYDTVTVHKSDLEPKLEAVRRLESVEIVTNILGNKEVLSGDTLSDMVLGI NGNGVIFDEAKVLAYANYLEGKYGNPGNTVSFHSASGKDIAMLTPYALHINVQGEKEALK QAISAFKTMEREPVYSYRPAQYAQPQFGTTFVEIDLSLQHVYYYEGGNLVWESPTVTGML SGDRATPSGIFFLKGKETNRTLRGKLVNGKPEYEAHVDYWMPFNGGIGLHDASWRSKFGG NIYVRGGSHGCINLPRNKAAELYNRIQKGCPIVVHE >gi|333758476|gb|AFIH01000001.1| GENE 2107 2168421 - 2169344 864 307 aa, chain - ## HITS:1 COG:BH2496 KEGG:ns NR:ns ## COG: BH2496 COG1760 # Protein_GI_number: 15615059 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Bacillus halodurans # 18 306 2 289 295 251 50.0 1e-66 MGLEKQESRKPGEKMIKYTSIKELCDTAERQGIKISELCLKDQAEQMQKSEEEIYSIMER NFEVMLESVSKGNDPNLRSTSGLTGGEGNKMLNYAEKTNGGLSGKFLTKAIGRAMCVSNC NAAMGRIVATPTAGSCGILPGCLVSMYEDRGFAKRDIVMSIFTAGAFGMVIAQTASISGA EGGCQAECGSASGMAAAALVELMGGSPSACGDALGMAIINQMGLVCDPVAGLVEIPCVKR NVSGVMIAFSSADMALSGIDLKIPVDECIAAMKSVGDNMSSSLKETAQGGLAASPTGLAL RKKVFGA >gi|333758476|gb|AFIH01000001.1| GENE 2108 2169386 - 2170054 681 222 aa, chain - ## HITS:1 COG:CAC0673 KEGG:ns NR:ns ## COG: CAC0673 COG1760 # Protein_GI_number: 15893961 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Clostridium acetobutylicum # 2 222 5 223 227 184 41.0 1e-46 MNVFNIIGPIMIGPSSSHTAGAVRLGRVVNKLAEGGEFKEVDIELSGSFARTYRGHGTDR ALLAGIMGYHSYNEEIRDALQIAKDRGIDYRFIENDIPGAHPNTARIHYTLDNGQSGVVE GASIGGGNIRVDSVNGMRVDFTGENNTILVLHRDKPGVIAEVTHIMYEKYKELNIGNFRL SRPEKGGTALMTIEIDQLPPEDLMKDINQLPNVENAILIRAI >gi|333758476|gb|AFIH01000001.1| GENE 2109 2170183 - 2171388 1077 401 aa, chain - ## HITS:1 COG:FN2053 KEGG:ns NR:ns ## COG: FN2053 COG1301 # Protein_GI_number: 19705343 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Fusobacterium nucleatum # 3 398 4 393 395 340 51.0 3e-93 MKRKLGLVPKLIIAIILGILIGQYAPLGLCSLIVTLSGIFSNFLKFVIPLMILAYVSMGI ADLSQGAGKLLLFTVILAYGSTLIGGTISYLVSINLFPSFMSADAMKQIQATADQSVASF FSISIPPMFDTLSAVVLAFIMGLCLSTMRGKEIGSTLYDAMKDFSGIIDRVLHKVIIPLL PLYILGTFVDMTRSGKTFAILSILWKVFIVVIIMHLCYLFVQFIVAGTISKKNPLTLMKN QIPGYTTALGTQSSAATIPVNLECAKHDGISEQIRNFVVPLCANIHMCGSMITITACATA VCLMNRIPISLSTVVPFIMTLGIAMVASPGAPGGSIMTALPFLYMIFGKEAGDPNGPICA IMVALYITQDSFGTACNVSGDNAIGVVVNEFYTRMIAKEKK >gi|333758476|gb|AFIH01000001.1| GENE 2110 2171552 - 2173342 2142 596 aa, chain - ## HITS:1 COG:FN2030 KEGG:ns NR:ns ## COG: FN2030 COG3808 # Protein_GI_number: 19705321 # Func_class: C Energy production and conversion # Function: Inorganic pyrophosphatase # Organism: Fusobacterium nucleatum # 12 590 80 668 671 540 58.0 1e-153 MCIGFGTRSWLSAVAFVFGALLSTLAGYFGMRSATAANVRTAEAARQSGMKKALSVAFSG GSVMGMCVSGFGIFGVGIFYLVTKDVGVLSGFSLGASSIALFARVGGGIYTKAADVGADL VGKVEAGIPEDDPRNPAVIADNVGDNVGDVAGMGADLFESYVGALVSAMTLGALLEAKSV EGVAFPLLLAGLSLLACVLGSILVLSLGGENPSKVLKMASYSSALAVLVFAFGLSQYFFG NFHAALAVTAGLVAGLAIGAITEYYTSSAYNPVKDIAKQSETGPATNIISGMAIGMRSTA VPILLICAAIFVSYHVLGLYGIALAAVGMLSTTAITVAVDAYGPIADNAGGIAEMAGLPE EVRNITDQLDAVGNTTAAMGKGFAIGSAALTALALFASYANAVGLQNINVLDSRVCIGLF VGAMLPFLFSAFTMSSVSKAAFSMISEVRRQFREKPGIMEGTEKPDYRTCVSISTHAALR EMIIPGVLAVLAPLVIGLLLGAESLGGLLAGALVSGVMMAIFMSNSGGAWDNAKKYVEEG HHGGKGSETHKAAVVGDTVGDPFKDTSGPSINILIKLMTVIALVFAPLIVAVGGIL >gi|333758476|gb|AFIH01000001.1| GENE 2111 2173300 - 2173539 102 79 aa, chain - ## HITS:1 COG:MA3880 KEGG:ns NR:ns ## COG: MA3880 COG3808 # Protein_GI_number: 20092676 # Func_class: C Energy production and conversion # Function: Inorganic pyrophosphatase # Organism: Methanosarcina acetivorans str.C2A # 1 58 1 58 671 62 53.0 2e-10 MNSLFFAIPVLGILGLLFALFQGQKILKEDSGNERMKEIAKAIAEGAEAFLFAEYRILLF LFAAYFCASDSEQEAGLVR >gi|333758476|gb|AFIH01000001.1| GENE 2112 2173536 - 2173607 62 23 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFVWYYEETTGEVTVFSSMREEK >gi|333758476|gb|AFIH01000001.1| GENE 2113 2173654 - 2174178 283 174 aa, chain - ## HITS:1 COG:no KEGG:Closa_0596 NR:ns ## KEGG: Closa_0596 # Name: not_defined # Def: peptidase A8 signal peptidase II # Organism: C.saccharolyticum # Pathway: Protein export [PATH:csh03060] # 16 172 3 154 155 81 35.0 2e-14 MRHFKIDWIWYLPKGFVQLTCLSAAVFSLDQIWKKKINREKEENFPKKLRGTRGMIEIRK AHNPGFSMGKLEKYPKFVGFVSIFATGFLFFSLPYFSYTVGDNFLLQKIGTALILGGAGS NTLDRIRDGKVTDYIYIRIGVLKKAIVNLADIAIFLGSLLYLLGFLWKAWKKIT >gi|333758476|gb|AFIH01000001.1| GENE 2114 2174165 - 2175232 887 355 aa, chain - ## HITS:1 COG:BS_ydeL KEGG:ns NR:ns ## COG: BS_ydeL COG1167 # Protein_GI_number: 16077591 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Bacillus subtilis # 7 350 16 369 463 204 32.0 2e-52 MEKQFKYIRLYKEIRRDIVEGRYRFQEKMPSKRILSDTMGVSLLTVEHCYALLEEEGYIE GRERSGYFVSYQDGLLFPVEEKEDPVQALSEIPGQGKEEMSFSIISKMIRKVLGKYGEEL LRRSEAQGKYFLRTALKDYLRRARGIFVTEEQILIGSGAEHLYSLLAQILGRGQSFAVES PSYEKMQKIYEANGIELEFLEMGKKGIHSEALRKAKSRILHVTPFHSYPSGVTATAGKRR EYLDYARRKNGFIIEDDYDSEFSALGKPEDSLFSMDERNSVYYINSFSRTIGPAFRMAYL LLPKERVEEDLQKISIYSCSVPVLEQCLLTELLQGGEFERHINRIKRRRRNSATF >gi|333758476|gb|AFIH01000001.1| GENE 2115 2175245 - 2176288 487 347 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229845805|ref|ZP_04465917.1| 50S ribosomal protein L31 [Haemophilus influenzae 7P49H1] # 3 300 11 304 378 192 35 7e-47 MEFSGELLSWFRENGRVLPWRGKKNAYYTWLSEIMLQQTRVEAVKGYFFRFIERFPDIQS LAFAEEEEVLKLWEGLGYYSRARNLHKGAKLLVEKFDGKMPKNYADIRSIPGIGEYTAAA ISSIVFGEKRPAVDGNLLRIFSRCELYEGDILSKEAKFAAFQYFQEKMRDFPGDFNEALM DLGATVCLPKGKIDCASCPISSFCKAHRGGNPEDYPKRRTKKPRKIEKYSIFVFREGDRI ALVKRPKKGVLAGLYAFYQVAGHVSKKEALEEARKLGFSALKLRELGATRHIFTHKEWDM IGYEIDLGEFPEAVVKEEGFRFYTREEIKNNLSIPSAYGFYKSFVLS >gi|333758476|gb|AFIH01000001.1| GENE 2116 2176305 - 2176850 418 181 aa, chain - ## HITS:1 COG:MA3749 KEGG:ns NR:ns ## COG: MA3749 COG1971 # Protein_GI_number: 20092547 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Methanosarcina acetivorans str.C2A # 1 162 1 159 186 82 34.0 6e-16 MLFIKSLLLGVGLSMDAVAVSMANGLKNPQMKEERKLSIAFSFGFFQFFMPILGFFLVKS FAGFAPIVMKYVSVISTLILCYLGARMILSGYRKKKNKETEETEGNLLFQAVGTSVDALS LGFTFSQDSIPRVFLSALIIGLVTFILSYCAILVGKKFGTVYAGNADILGGIVLLAVAVL L >gi|333758476|gb|AFIH01000001.1| GENE 2117 2176838 - 2177335 436 165 aa, chain - ## HITS:1 COG:CAC2751 KEGG:ns NR:ns ## COG: CAC2751 COG0454 # Protein_GI_number: 15896008 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Clostridium acetobutylicum # 1 156 1 164 167 101 36.0 7e-22 MQIRLARQEDIPEICRIYELAREHMRAEGNTSQWKKYPNETNALEDLAKQALYVLEEDGI LGAFSFFTGEEKNYRKIEGGAWRKAEPYGTIHRVASSGKRRGITKACFSFCLDKIPYLRI DTHENNLSMQAALRNFGFHYCGIVYVEDGSSRLAFDFIKGEPCYS >gi|333758476|gb|AFIH01000001.1| GENE 2118 2177662 - 2178057 147 131 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLHSHYEVLLLFLLYAALKDILERRIPKQFFLCFFLCFFCLLQSDSSKHSILLFPILLFL ILLLSYPLFYFTGSGGGDWKLFSLLLSLLPINLSISLLFLSCIFSLLLFYYLKEDIPFAF ALFLAAIPLLS >gi|333758476|gb|AFIH01000001.1| GENE 2119 2178099 - 2179187 600 362 aa, chain + ## HITS:1 COG:CAC0037 KEGG:ns NR:ns ## COG: CAC0037 COG1192 # Protein_GI_number: 15893335 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Clostridium acetobutylicum # 1 294 1 290 361 62 27.0 2e-09 MEKILTIYDEDELYCKRLSLYLRQNTKLPFQIYPMSTPERLEEFLKKKNSDLLLLSEKNA KSLHFSPKSGRTLYLTEESPLSKKKKENSIYKYQSADRIMREILLQYGELALLESNGQGR ADIFMIYSPLGRSGKTALAYEIAQVLGKNRQTLFLSLSESGSAYKQSSNSPGISSIKSNE AKERECLTEALYHFKENTLSPLIIKALSYDRGSYSTILPVRSPEDIQSMSSRELALFLDK LAEDAGVSALILDTDCSLSKYLDCFPQCKKIFMPILPDIISKEKLAFFRNYLKKNLAEEI LEKFVQCEIPSAIESSEYIHPAQGKVEYLRSSSLKDYTESLLLRYIYEEEDKEKEQYRKM IL >gi|333758476|gb|AFIH01000001.1| GENE 2120 2179199 - 2179522 212 107 aa, chain + ## HITS:1 COG:no KEGG:Closa_0132 NR:ns ## KEGG: Closa_0132 # Name: not_defined # Def: type II secretion system protein E # Organism: C.saccharolyticum # Pathway: not_defined # 3 91 1 93 405 69 41.0 3e-11 MALDNIKQEIKRELLTDLEERQMSDSHLYQQIDSALLNRRDIGLQEKLYLRTAVFDSFRR LDLLSELLDDKNVTEIMINGPKEIFVEKKERWKSGTALFKAKNNSLS >gi|333758476|gb|AFIH01000001.1| GENE 2121 2179471 - 2180364 745 297 aa, chain + ## HITS:1 COG:SMc02820 KEGG:ns NR:ns ## COG: SMc02820 COG4962 # Protein_GI_number: 15963897 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Flp pilus assembly protein, ATPase CpaF # Organism: Sinorhizobium meliloti # 8 276 148 417 466 254 49.0 9e-68 MEKWNRSFQSEEQLFELIQQIVSRINRAVNTKSPIVDARLEDGSRVHVVLPPIALKGPTV TIRKFPEPITMAKLIQLGSLTEDAALFLESLVKASYNIFISGGTNSGKTTFLNALSQYIP KRERIITIEDSAELQIQEVENLVSLETRNANAEGEGAVSISDLIKASLRMSPNRIIVGEV RGKECLDMLNAMNTGHDGSISTGHGNTSRDMLRRMETMVLQGADLPLSSIRNMIASAIEI MVHLGRSKDHKRRVLEISEVTGVENGEIQLKTLYQYNGEVLEKLSNLSREEKLLRRL >gi|333758476|gb|AFIH01000001.1| GENE 2122 2180264 - 2181091 618 275 aa, chain + ## HITS:1 COG:RSc0651 KEGG:ns NR:ns ## COG: RSc0651 COG4965 # Protein_GI_number: 17545370 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Flp pilus assembly protein TadB # Organism: Ralstonia solanacearum # 75 275 131 325 325 67 25.0 4e-11 MEKFSLRPYINTMGKFWKNCRICLVKKNSSVDYRQYEISLGEYLYILVKILGILLAFSYA FYHSFLLFFILIPFGLLIPFFFRQTLRKKRQELLLIQFKEMLSILNSFLSAGYSIENALI AAIPDLSALLGENSYMVEELKQVKRSLAMNRPLEEPLSNFALRSGLDDIHNFSEIFLVAK RSGGELSEIIQHSSSIIHDKLSIHEEILTLSAAKRFEQKIMNCIPFFIILYLNASSPDFF HILYHSIMGRIVMTVALFIYLLAIYLSQKIINIPI >gi|333758476|gb|AFIH01000001.1| GENE 2123 2181200 - 2182624 848 474 aa, chain + ## HITS:1 COG:no KEGG:Closa_0134 NR:ns ## KEGG: Closa_0134 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 52 473 42 419 420 176 31.0 2e-42 MKNNVLFQYLHQFLQSFSPKEEAILKKQSLLIILSLLLSSVVFLKTQEESHIQSGYTLKR EGIGGSEYSLPLQVQGLNPQRKENLNITVSPRIYTKEEADKLFSELHDRMESLILPEEES LDGIKTSLQLSSFFPKENVKASWSFSPTALINGKEKLTTENNLDLILGYRSILEERGKIH HEMLAQNQILEGELELKLSTIILPPKEEKTNADLENYVRDSEDYLYYSPRYIFPIRILPE EKNSLETLRDLLIQKISILNQEERGTEELHLPQEIEGHRIHFSEEKSRAYLYIPLLGLFA AFLLPLKDKEEKKENLKKRANSLELDYSELVSKLVVYLGAGLSLRNAFTEISKQYEYLVE SCGLENHPLYDELHTLLNQLKSNIGEGNAYLAFSGRISLRPYNKLISVIEQNRKNGSKHL RLQLQVEMQEAFEMRKATAKRLGEEAGTKLLLPLFMQLFIIMMMILYPAMTSLS >gi|333758476|gb|AFIH01000001.1| GENE 2124 2182829 - 2183068 264 79 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227871819|ref|ZP_03990221.1| ## NR: gi|227871819|ref|ZP_03990221.1| hypothetical protein HMPREF6123_0160 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_0160 [Oribacterium sinus F0268] # 6 79 6 79 79 77 56.0 4e-13 MLLQNLTELQYSLDAFLLSRWEQCKKKRKELLHGNDALGTIELVLIIVVLISLVVIFRDR IQKVLNDILKKIESNAKNV >gi|333758476|gb|AFIH01000001.1| GENE 2125 2183107 - 2185140 1089 677 aa, chain + ## HITS:1 COG:no KEGG:Closa_0136 NR:ns ## KEGG: Closa_0136 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 7 645 5 613 630 216 25.0 3e-54 MKKNYSASITVFLSLSFVLIAALILTITESARTIAQKYYMQTALNSAMESLFSEFHRPLW ENYRIYALEFRDDNLLKEELQSFIKPYSDARNLFPAKIEKDGFSFTGRGLLSESHYFEEE ILEYMPALLAKDCIEFLGEKKSGTDIPSILEEASKKEKEADSIQRLQEKYALNHYDVEYL EDCINNIDRFCKKTETLKHYALYSLQAHDASLFFSYSSSLKATLNSLKNTVNSYDARADL LKSKVEALWNDFSAEKENLEEDGIAAIETQLKSYDNYLDDGGRVRQKIDGFPAQCENLDS AIEGIEENVRRFQEYIEEERERRRKRKKEEEDYDEDNGLQAEIDNFYNDTISTWQALTMP VYGEAVTQINKKNKRILESIHDIGKKKLLELLLPSGKECPSAEESFSSALFSTESAANPI QVGLLGEYSLRFFHSYHKEESAHTTPYSNAKGLEVEYLLHGKKSDYENLSAQVTSLLAFR ESMNFIHIMSDPEKLEAVEEFVTSFLAITANPVVIAVFSAFVIGIWAFAQSLLDVKELLN DQRIPLMHSLESWSLSLNHLLDFLSYLSGEEIPRENIGLSYEDYLRISLFTKGLLSQAKI NDSMLYCMEKDIQTSIRDKEPSFRMDKCLYYLSTDAEIFSRHSLYHKGFLEMIGVNTGEE RYQTVLHSDYKYKNLSH >gi|333758476|gb|AFIH01000001.1| GENE 2126 2185102 - 2185224 115 40 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTIERIKMLKEREASIVMEAEYDFIGAPLMAQIFVFIVRM >gi|333758476|gb|AFIH01000001.1| GENE 2127 2185217 - 2185948 374 243 aa, chain + ## HITS:1 COG:no KEGG:Closa_0137 NR:ns ## KEGG: Closa_0137 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 241 62 305 307 86 26.0 1e-15 MVMLMTPLLILNRSIKISSILEKNARCVSMYKYLEHYGLLKTEINDVPHIDEILTVGETA LEDLALPVEVEMEGMTNIRAWKSHITKEDILLDLEYEELIPLSIINKKSIYQEIVAHRRA WIGVKGARWEKDEEETTPPKEMVYVINGPSLVYHKSRDCSYISNDFLSCSPRMIDGSSAK YGGKFCPCKACKPSLNSAIVYYTVAGRRYHSSPDCPAMRSSIHEIPLSQALSEGRHPCPR CGN >gi|333758476|gb|AFIH01000001.1| GENE 2128 2185972 - 2186475 29 167 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSILFFLFLLKTILFYSFFLFSVLWDFRKKSLPKLLLLFYSLVGVPFFLFSLWQDFFQGP FQLSLPFLYSFYPFLFSFLLFLFAKCSKGALGCGDGLFLLCCAFYLNYKSFLFLFLSGLI CSALVSILLFLFSLKMKKNWKNLSFPFIPCFIPAGVYFFVLLFTPRT >gi|333758476|gb|AFIH01000001.1| GENE 2129 2186492 - 2186746 123 84 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MHSIETSLILFLSFVCIVLLLQCCIFLHSTVKERSEKEYSREIESHRLGKDKDFYKVECY TRFVSVVEDLLRKEEAESKVNPEP >gi|333758476|gb|AFIH01000001.1| GENE 2130 2186788 - 2187918 642 376 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227871824|ref|ZP_03990226.1| ## NR: gi|227871824|ref|ZP_03990226.1| hypothetical protein HMPREF6123_0165 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_0165 [Oribacterium sinus F0268] # 1 263 1 262 430 182 41.0 3e-44 MSHSSLRVEKDLTHSYLYLYGKVWKENSHEQKIIQQCSIPGTLPFRLIQEEQEDIFQYNF SPYERMLDYFSDKKMNLNHILSLFESIRFALFHLEEFLLSPEILGLDVEEIIYDAENSAF LFPLIPSAKNVLEDELKKLIDYVFNHVDEADERAILSAYFLQQEKKKDHLQLPRILQILH CTVNKEGRLGVPFSSSPDPNATSSGKPPYGKPASEETEKSPANSVSKADPKSEKNPDATK ALSVQELDLSSCSYSEYMGKQQEKSESSIPFSGTSDLTPPFSEEIEKNEKKKEKWAPPRF SSLKQVLRNKKKILLCLLIMILFPIILYGWKGKTTLIEVLPCIILIEVAILLYGILDFLP VFFNSEKEKSKSLNDK >gi|333758476|gb|AFIH01000001.1| GENE 2131 2187957 - 2189735 1253 592 aa, chain - ## HITS:1 COG:PA1727_3 KEGG:ns NR:ns ## COG: PA1727_3 COG2200 # Protein_GI_number: 15596924 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Pseudomonas aeruginosa # 40 279 10 251 254 153 34.0 1e-36 MEHEQNQGRPKKGIRKFPRSQQDKIDFSRLELEQYIESHIEEAIEKRWIKVYLQVNIRGL SRRVCGAEALSRWVDPKYGMIYPGDFIPVLEKSLKIHLLDFFVFEEVCRNIAKRRNRGEA VFPISLNFSRLDFDVERFLDKLDDLVALYKIPKSILHVEITESVVMHNEEYMKFAVRQLR EQGYKVWMDDFGSGYSSLNLLKEFEFDTFKIDMRFLSDMGKKSLIIISSILYMAKEIGIH TVAEGVETEEQYQFLKAAGCERMQGYCFGRPEPIENWLAERIEENGVESGEDTFLYDRVG LVNILSPTPFVFDRLDETPTIYGFDTVLAMALVSEKAGKIKHLNWTKPYKKTIEDLGYED IEEFQGILNDEKSLVVERIRDTISLAKDSLGIETTDFISRGQYCQIQVRRVTSKGNSYIY LLRIDILTNNDSFQKSNNLDNSLRPLYSMYDTVVLLDLQNNTLLPIYRTNAAEKIERSND LTNDLDKYLHKYIHPDDFARCREFFNPSDMWERLGSNGEGFVLSYFRAKNKEKKYVWKRY ILIRSEEAQDERRVIFGIHTLNMEKLSFIKDEAQMFFMENHEEQLGDAEMFQ >gi|333758476|gb|AFIH01000001.1| GENE 2132 2189790 - 2190482 582 230 aa, chain - ## HITS:1 COG:CAC0908 KEGG:ns NR:ns ## COG: CAC0908 COG1179 # Protein_GI_number: 15894195 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 # Organism: Clostridium acetobutylicum # 5 227 6 249 251 245 49.0 6e-65 MLEQFSRTELLLGRDAIEKLSRAKVIVFGVGGVGGYAVEALARSGVGRIDLVDKDTVSLS NLNRQLIATRDTVGREKVEVMAERIHSINPDCEVHSYCCFYLPDTKEQFDFSSYDYIIDA VDTVTAKLSLICEAERAGTPVISAMGAGNKLNPAAFKVSDIYQTRVCPLARVMRRECKKR GINKLKVVYSEENPQKPQIDRGVPGSVPFVPPVAGLILASEVVRDLLMFL >gi|333758476|gb|AFIH01000001.1| GENE 2133 2190476 - 2191018 178 180 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764517|ref|ZP_02171573.1| ribosomal protein L32 [Bacillus selenitireducens MLS10] # 5 170 4 174 190 73 30 5e-11 MRKLKIQELVLAALMTAVLAILSPISIPIGPVPISLGTFAVCLSVTILGKNLGTVSYLTY LLLGLAGLPVFSNYEGGLAKLMGPTGGYLIGMLFLSLLGGFGVDRFAKKPILQYLFFLLG ILLCYIMGTLWLSKVLYLGFMKALSIGVLPFIGPDCIKVFLALVLGRKVKAILKKRSGEC >gi|333758476|gb|AFIH01000001.1| GENE 2134 2191046 - 2192047 682 333 aa, chain - ## HITS:1 COG:SPy1810 KEGG:ns NR:ns ## COG: SPy1810 COG1482 # Protein_GI_number: 15675642 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannose isomerase # Organism: Streptococcus pyogenes M1 GAS # 1 322 7 304 317 186 34.0 5e-47 MEAATKDYLWGGERLREEYHVSSEKSPLAEAWLLSCHKDGESKILLSNSVRLPLSSFLQE NPKSEGDMGKEFPVFPMLIKLIDAKLPLSVQVHPDDKYAALEERSLGKTELWVVLEREEG AFLYYGFKSEYSKDEIRKAIEGHFLTEYLNKIPVEKGDVFFIPAGTVHAIGAGICIAEIQ ENSNLTYRVYDYGRKDKDGRERELHIEKALSVMNCKKTEIRDLTSSGPVLPENGAERLAS CPYFTVERCSLKEGEIHKRVVGKESFLSAILIDGKGKIVQKTVRKRTEEEGASLEESRQE MIAEKGNSFFIPAGSGEVEFSGAGNWLFSFLEK >gi|333758476|gb|AFIH01000001.1| GENE 2135 2192089 - 2194803 2211 904 aa, chain - ## HITS:1 COG:BS_pbpD KEGG:ns NR:ns ## COG: BS_pbpD COG0744 # Protein_GI_number: 16080201 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Bacillus subtilis # 33 653 13 620 624 318 32.0 3e-86 MREENGRDRGRGKRKRKSILRFFGKVFLFLTGLLALMTLLGFFIFIRPELNRLRTIAYDK LASGNLKDLTKRSDTIVLDYAGNTLGTVNAGHFVYVTIDQISPNLQNAYIAQEDRKFRSH HGVDYMATLRAVVQLVKNRGKIKQGGSTITQQVVKNTYLSSERTYTRKIVEMILAQELEK RYTKADIMEIYCNTNFYGNNCYGVEAASQFYFDKAAKDLTVEEAATLAGISNAPSRYEPV RHPDLALKKRNQVLKSMETVGYLTEEDYEAAVASPLTISGNSQKGTDEDYLNSFALYAAT LRMMEVNQFPFTYHFSTREEKENYQEQYEESYAYYNRELRAGGYTIYTSLNPEIQAKAQT LLDEGLAKFKEVQENGKFSMQGAAVIIDNKTGYVVATIGGRGTEDKYNRAYLSYRQPGSS IKPLLDYAPALDMGIYNAASLVDDHKWEDGPSNSGGNYFGEVTLREALNRSLNTVAWQIL DSVGISDGLEYLEKMHFLGISLKDYTAPAVSIGGFTNGLRIVDMARGYSTLANGGIYEDK TCIVKITSEKDGVVADENSLKKTQVYTEDTAFIMTDILKGTMTTEYGTGRGLKLKNKMPA AGKTGTSNGSKDTWFCGYTKYYSMAVWVGHDIPVEMPGIYGATYAGKIWKNVMDVLHEGL DPEDWEVPSTVEKETDQDSGITDYVSRTAMRKGEEERKKRAEKENKQTVIRQLEEYKNLH VDTVEDIFTARTLFEETRDLLNDIPDEKFKKEYQEKLFARQKDFLKIEEQWKVEIEAYLQ KKEEESRLAESLEESKAKEEEEKNSANREAFLSYLSSLQSLEYRDGDTEALIADATDSLH ELAGAEDYASLSQQLEKAITRVRKLPLKEEDSGGPGGSSNFYDGPGAGNYLGERDSENGP GVSP >gi|333758476|gb|AFIH01000001.1| GENE 2136 2194897 - 2196447 1716 516 aa, chain - ## HITS:1 COG:CAC1816 KEGG:ns NR:ns ## COG: CAC1816 COG1418 # Protein_GI_number: 15895092 # Func_class: R General function prediction only # Function: Predicted HD superfamily hydrolase # Organism: Clostridium acetobutylicum # 2 516 5 514 514 505 58.0 1e-143 MDPLGIALVVIVALIVGVIMFILGQNKQRSIYAKTVGSAEQKSREIIDDAIRTAESKKRE SLLEAKEEALKAKNELDKEMKDRRKEVNELERRILKREESSEKKAASLERKEAELLHKEE VLQEKEGEVEQLQAQKLVELERVSGLTKEQARQELLHSVEDSIKHDTALIIREYDARAKE EAERTAREYIVEAIQRCAADQVTESTVSVVQLPNDEMKGRIIGREGRNIRTLEQLTGVEL IIDDTPEAVVLSGFDPIRREVARIALEKLIVDGRIHPARIEEVVEKSRKEVNDTIKEEGE SATLELGIHGIHPELVMLLGRMKFRTSFGQNALQHSMEVAQISGLLAQELGLDTRMAKRA GLLHDIGKAIDHEVEGSHVDLGIELCQKYHEPEVVINAVASHHGGTEPTSLISFIVAAAD AISAARPGARRKSLETYTNRLKELEEIANSYKGVEKSFAVQAGREVRIMVVPDEVSDDDM TIMARNISQQIQDQMQYPGVIKVNIIRESRAVDYAK >gi|333758476|gb|AFIH01000001.1| GENE 2137 2196586 - 2198043 1197 485 aa, chain - ## HITS:1 COG:no KEGG:EUBELI_01824 NR:ns ## KEGG: EUBELI_01824 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 6 468 25 467 484 243 31.0 1e-62 MKWNKKKGSLYEAASAVVLFLFLFVLCIIGMMLPLRKRYSNEEKRELKAFPKFSLGAVLK GSYFQDISEWYQDSYPGKEGWLSLEAKVEGLYGFQGEALYGEGKNVKESIPTEGELAETF SLEKDEEKSSKEKVPVEETLSAADSENQNAETLKKVEKTGEESKESEKNQHFETDAEGNL EIKKADANVELQGETAGSIYLSGKEAFELYYFSEKGVRSYASLLNTVNSLYPNLEITAMM VPNSFGVLLDPKTQEKLASSGMDQAISYTYSLMDKRIHTIDVFSSLYRHRSEYIYFRTDH HWTQLGAYYAYVEYCKVRGIKALALESFSKAEYDGFYGTFYFYMNRPEALKANPDSVIAY TGAVNDMHFQSADGKEGDAKLINDASNMLPGNKYNCFMLGDHPYVEVHNEKGNGNLLVIK DSYANAFVPFLAQDYRNIYVVDYRHYEKKLPELIRDKEIGEIVFVNNVMGIGESQSKKML SLFQG >gi|333758476|gb|AFIH01000001.1| GENE 2138 2198040 - 2198129 90 29 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIEVSGLRQRFKLMIQVSGSIEKVGEEEL >gi|333758476|gb|AFIH01000001.1| GENE 2139 2198229 - 2200016 858 595 aa, chain - ## HITS:1 COG:CAC1564 KEGG:ns NR:ns ## COG: CAC1564 COG1696 # Protein_GI_number: 15894842 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted membrane protein involved in D-alanine export # Organism: Clostridium acetobutylicum # 1 409 32 429 473 230 35.0 6e-60 MVFLFFSLLFLLFQGLISLSILALLSYYSFFIGKRMEKESRTFFAFSIFVLLLPLLFFKY SIYLSALPLWLKGFMPFGISFYTFRLITYLADCRKGEKAEENFFHFAMYAFAFPVLSQGP ILRYKEMREEIEDREWDFDKLSRGLYRFSFGLWKKLLLADSMGKLSNSFLPLELAKGLSG SGNTLPSFTAVFLSSLSFMLQIYLDFSAYTDMAIGIGEMVGFTIPENFHYPYEAKNVRDF WRRWHISLSLFFRDYIYIPLGGNRLSFPRRVLNLFLIWILTGMWHGASFNFILWGLYFFV LIVLELMGRKALHRLETLRPEWKEKMTSSRLKVLKEPVLHIYTLFAVYLSWILFRYQDFQ ALKNVLKAHFFLNTEAFTDEKTLLLLRNHIFLFILAILFSTSFFKKMDEAWGELMMRGRL RKERKVKREREGFYGMEDNDDAEEEGEVVREASGPAFCEPATGDTEYLADTERTTDTETA FVRTEKPEETEIAEEVKPEETEIAEEVKPEETEIAEEVKPEETEIAEEGLSEEAHRRHLL ALRKIQIKTKWKIFLLDYGEKIYYFVKLALALSALALSFAAMAGQSYTPFLYNQF >gi|333758476|gb|AFIH01000001.1| GENE 2140 2200508 - 2201362 571 284 aa, chain - ## HITS:1 COG:FN1343 KEGG:ns NR:ns ## COG: FN1343 COG0084 # Protein_GI_number: 19704678 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Fusobacterium nucleatum # 2 283 9 257 258 195 42.0 1e-49 MIFDTHCHYNDESFDQDREELLRSLPEKGVDRICEIGYTPESSEKAIQLAKAYVDSSLSI HSVVGIHPEHAAVWSPEATAKIEALSKEKEVVAIGEIGLDYFRLDKRSKVQKERDEEKKR RGEEVQECFNPEPTVQKSCFIEMLDLAKRRDLPVVIHSRDAALDTFRIIRDQKGFVNGGI VHCFSYPLEVAKDFVSLGMMLGIGGVLTFTNAKKLKQVAVEIPLEHIVLETDCPYMAPVP VRGTRNHSGNLQYVAKLLAELKGISVEDVIRKTAENGKRVYRIK >gi|333758476|gb|AFIH01000001.1| GENE 2141 2201375 - 2202151 539 258 aa, chain - ## HITS:1 COG:no KEGG:Closa_0158 NR:ns ## KEGG: Closa_0158 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 15 249 11 245 251 140 37.0 6e-32 MTGLNALDTKKKGGGVSADLLKLLALVSMTIDHYAAIVIYNGNLYGFDPEYYQMAIATEK GMQLMRIYHIFRTLGRLAFPIFAFLLTEGFIHTKDRKKYFLRVLFMGLCAEIPFDLCLFN QWFDFSAQNIGFTLALGIATMFLMKKYRRKPFLKWTSVLGCAALSELLHFDYGALGILLI AVLYNFRKEKALRIASGAFLSVLLSLGNFGAAACSFLPIFFYNGEKGRLPLGRVLYFYYP LHLIFFYLLIYLGAKITA >gi|333758476|gb|AFIH01000001.1| GENE 2142 2202153 - 2204210 2168 685 aa, chain - ## HITS:1 COG:CAC2991_1 KEGG:ns NR:ns ## COG: CAC2991_1 COG0143 # Protein_GI_number: 15896243 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA synthetase # Organism: Clostridium acetobutylicum # 2 534 3 526 536 619 56.0 1e-177 MERKPYYITTAIAYASGKPHIGNTYEIILADAMARFKRYEGYDVFFMTGTDEHGQKIEGK AKDAGKTPKEFVDEVVGEIRSIFDLMDTSYDKFMRTTEPYHEKQVQKMFRKMYEKGDIYK GKYEGWYCTPCESFWTDSQLVDGKCPDCGRPVEKASEDAYFFKMSKYADRLMEHIESHPE FIQPVSRKNEMVNNFLKPGLQDLCVSRSSFTWGIPVDFDEKNVVYVWLDALTNYITGIGY DVDGEHGENYRKYWPADLHLIGKDIVRFHTIYWPIFLMSLDIPLPKQVFGHPWLLTAVGK ADEGTKMSKSRGNVIYADDLVRLFGVDAVRFFVLHEMPFENDGVISWELMVERYNSQLAN ILGNLVKRTIAMSNKYFDGIVEKTDAVEPVDADLKNTVISQAKLAIEKMEEHRVADALTA IFEIFRRSNKYIDETEPWVLAREEELAPRLKNVLYNLTESIVIGASLLESFMPNTAKTIL EELSTEKREFTKLDQFGLYPSGTKVSENPSTLFDRKDWKEIEKEVEKITEEQIRKASLEE EKLEKKDGNKDAADESPVEGDAPRDRNPVVLPYKDEVSYEDFEKLDFRIGKILHAEEVKK SKKLLLFKVQIGEEVRQILSGIKSAYKPEDLVGKKVMVLVNLKPRMIAGYESQGMLLSAA FEEDGEEILSLMTSLRDMPAGADIA >gi|333758476|gb|AFIH01000001.1| GENE 2143 2204384 - 2204800 392 138 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227871840|ref|ZP_03990241.1| ## NR: gi|227871840|ref|ZP_03990241.1| hypothetical protein HMPREF6123_0180 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_0180 [Oribacterium sinus F0268] # 1 138 1 138 138 163 75.0 5e-39 MKTKLGVSAVLVAAGVYILAIVGNYTAILLAAGYIFLVEDNDWLKKSALKAVATMLFFSF LLSVLGLVPDVVKWIGTCFTVISLDVSTYAFTSFWSLITQAIEIFRTCLFLALAFKALNQ ASITVPFVDELLNKHFTE >gi|333758476|gb|AFIH01000001.1| GENE 2144 2204828 - 2205310 670 160 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227871841|ref|ZP_03990242.1| ## NR: gi|227871841|ref|ZP_03990242.1| hypothetical protein HMPREF6123_0181 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_0181 [Oribacterium sinus F0268] # 1 155 1 155 155 132 78.0 1e-29 MGFFDELGKKISDASQDVMQKGKEMADTAKFNSMIHDEEKKITAVYSKIGKKYFEDFKNA PAEGFKEFVDEIHAAQAKIAEIQEKLNALKNEGKAAVEAAATEAKETLNHAADAAKSAAE GAADAAKSTAEGAADAAAQAVNKAEAAVENAVNENQSTGQ >gi|333758476|gb|AFIH01000001.1| GENE 2145 2205371 - 2207074 1103 567 aa, chain - ## HITS:1 COG:SP2136 KEGG:ns NR:ns ## COG: SP2136 COG5263 # Protein_GI_number: 15901950 # Func_class: R General function prediction only # Function: FOG: Glucan-binding domain (YG repeat) # Organism: Streptococcus pneumoniae TIGR4 # 442 558 520 620 621 72 41.0 3e-12 MAGKMSVYAEEGRELRSSSSNISSLHGTQFFSAGANYGYFGETPPAGKIVIDEIQLREQI NDLMPDLMPNTPRDGMRVQELDLRGKNLKLKIHQKGDAPNQFINVDDIYISSPIYYNKMT GESDYERYTERTFTPGDYFYGIELTTTNKNYWFENDLRNSFSLETVYGQATIRVHHTYSF YFAGEEESANKLVLYFSEGSMSKVEEDYPFKEIRMFLPEKDLQYGKLGDEVPYTTWSKMG DGLLDGNGEETETEVSIPHKGENKVRCEYALEDVSRGGYYGSGSKITRPGTYRRVLRNFI LKMNSISHYRLTFGGVDGSLVTRFYINDKEWQIDPRTSSLDSIDPVTGSLKVTLYDPDYI TLTGAGGNSGGGSSHGGGSGSSSGGSSGGSSLGGGSYSGGSSSGGGAFSGGGSGGSSGGS GGGSSAIFSGSPAGQVLGVDRSLSNGEWVKDEKGWWYKRKDGSYPKNTWGYEAYNGKSYW YYFLDSGYMATGWVDLNGSKYYLFSGSDGWMGRMLTGWQWIDGYCYYFGADSGNNEGHLY RNEKTPDGYQVDNEGRWVKNGVVQVKK >gi|333758476|gb|AFIH01000001.1| GENE 2146 2207512 - 2208807 1575 431 aa, chain - ## HITS:1 COG:CAC0713 KEGG:ns NR:ns ## COG: CAC0713 COG0148 # Protein_GI_number: 15894001 # Func_class: G Carbohydrate transport and metabolism # Function: Enolase # Organism: Clostridium acetobutylicum # 2 428 3 426 431 536 64.0 1e-152 MSYLEIEKVLGREIIDSRGNPTVEAEVILSDGTVGRGTAPSGASTGEFEALELRDGDKSR YGGKGVSQAVENINTVINDILIGMDPMDIYAVDRAMIEADGTKDKSKLGANAILAVSIAT CKAAANALDIPLYRFLGGANGNRLPVPMMNILNGGAHATNSVDTQEFMIMPAGAPSFREG LRWCTEVFHALQKILKDEGNTTAVGDEGGFAPNLASDEDTIEHILKAIKAAGYEPGKDFV LAMDAASSEWKSEKGKGFYHQPKSGKDFTSDELIAHWKSLVEKYPIYSIEDGLDEEDWEG WEKMTKELGDKVQLVGDDLFVTNTERLSKGIKNGSANSILIKLNQIGSVSETLEAIKMAH KAGYTAIASHRSGETEDTTIADLAVALNTCQIKTGAPSRSERVAKYNQLLRIEEELGEAA YYPGFGAFNRK >gi|333758476|gb|AFIH01000001.1| GENE 2147 2208967 - 2210244 234 425 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|171319301|ref|ZP_02908414.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Burkholderia ambifaria MEX-5] # 141 398 61 273 302 94 30 2e-17 MNLENNCKVSSENNRKLNAEKNDNVNAGNKHEANPTGGASSLKKCFWDSLSKESISKEDF SLQDIERFSLPLLEEAGIPEAELDLRLLMQEAFSLETKDYLLWKREALSAFYRQREAHSV FNQKSAPGESADSLLCFSGALDSALTCFFSFLEKRLERVPLSQILGRQEFFGLSFLVNEN VLSPRQDTECIVERILQEEKEKGKRSEKSKGIPGSSAFPFADDANTNEKQLSVLDLCTGS GCIGLTLLKYLNCKTMLLLDKSDKALEVAKENYRRLFLEEEERIANVEREHLREQKNRVS VYFPESDLFSALPPFMEEKGISGFDVLVSNPPYIRSSVVPGLDEEVALHEPRMALDGGTD GLDFYRRIAKEGKCFLLPGGRVYLEIGYDQGESVKSIFQKEGYREVEVFQDYEGRDRGLY AVSPT >gi|333758476|gb|AFIH01000001.1| GENE 2148 2210259 - 2211230 861 323 aa, chain - ## HITS:1 COG:CAC2886 KEGG:ns NR:ns ## COG: CAC2886 COG3872 # Protein_GI_number: 15896140 # Func_class: R General function prediction only # Function: Predicted metal-dependent enzyme # Organism: Clostridium acetobutylicum # 1 298 1 296 317 215 39.0 8e-56 MSKQRYSGIGGQAVIEGIMMKNGEKYSVAVRKPNGEIDVMESEYLSLTDKYPFLKLPFLR GIVSFYDSMALGMKCLSHSASFYEDDEGSEPGALEKALTKLFGDKVEQVLSALVMVFSFA AALFIFVALPTILLNFLKTRLSISSSMLAFLEGVLRILIFVLYIKLISRAKDIRRTFEYH GAEHKCINCVEHGLDLTVENVLASSKEHKRCGTSFIVYVMMISIFLFMFLQFDSLWLKVL SRLLLIPVIAGISYEVLRLVGLFDNPLTHILFIPGMWMQGLTTKEPDAEEVEVAIAAVEK VFDWRAFQKEHFSENVHAGNQTS >gi|333758476|gb|AFIH01000001.1| GENE 2149 2211499 - 2211702 314 67 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|238923857|ref|YP_002937373.1| ribosomal protein L31 [Eubacterium rectale ATCC 33656] # 1 66 16 81 81 125 81 8e-27 MREDIHPSYYQATVTCNCGNTFVTGSTKPEIHVEICSKCHPFYTGNQKAAAAKGRIDKFN KRFGIQQ >gi|333758476|gb|AFIH01000001.1| GENE 2150 2211929 - 2213392 1839 487 aa, chain - ## HITS:1 COG:CAC2701_3 KEGG:ns NR:ns ## COG: CAC2701_3 COG0516 # Protein_GI_number: 15895958 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Clostridium acetobutylicum # 205 483 1 277 280 380 66.0 1e-105 MAKIIGEGITFDDVLLVPHYSDIIPNEVDLSTNLTKNIRLNIPFISAGMDTVTEHQMAIA MARCGGIGIIHKNMSISEQAEEVDMVKRSENGVITDPFSLTKDHSLKDANDLMAKFRISG VPITEGKKLIGIITNRDLVFEEDYNRPISACMTSENLVTAKEGTTLEEAKSILARAKVEK LPIVDEEGNLKGLITIKDIEKQIKYPNAAKDKQGRLLCGAAIGITMDVLDRAQELINAHV DAIVLDSAHGHSKNVITCVRSLKEKFPDLPVIAGNVATKEATKALIEAGADCIKIGIGPG SICTTRVVAGIGVPQISAVMDAYAVAKEYGIPIIADGGIQYSGDVTKALAAGGSSVMMGS VFAGCDEAPGEFELFQGRKYKVYRGMGSIGAMKQKNGSSDRYFQAGAKKLVPEGVEGRVA YKGKVEDTIFQYIGGLRAGMGYCGAKDIPTLQETSEFVKISSASLKESHPHDIHITKEAP NYSSDSI >gi|333758476|gb|AFIH01000001.1| GENE 2151 2213538 - 2214752 1085 404 aa, chain - ## HITS:1 COG:FN1382 KEGG:ns NR:ns ## COG: FN1382 COG1373 # Protein_GI_number: 19704717 # Func_class: R General function prediction only # Function: Predicted ATPase (AAA+ superfamily) # Organism: Fusobacterium nucleatum # 8 401 3 402 402 290 39.0 3e-78 MEERNRIERPEYLQTLKQYRDMPLVKILAGIRRCGKSTILEMFKEELIRSGISEDHIISL RYTSEELEEGMSSKEMYRGIKRLMRDKDRYYLLLDEVQEVTGWEKAINSLLEDANTDIYV TGSNSKLMSGEISDYLTGRYISIPVYTLSFSEYLRFKEGDLRSKKELLQDYIRMGGFPIV ARSNFDERSAYQIVEGIYNSVINSDITGRYKIVNLDLFQRVVKFVVENVGKTFSANAIAK FLKSEGRSLSIESIYNYLSYLEKAFVIYRCPRYDLQGKSVLKTQEKFYLADSSLKYCMMG FNPKSVASMLENLVYFELKRRGYEVYIGKNETKEIDFVAVRRDERIYVQVCRNLPEDSDR ELTNLLELKDHYPKYVVTLDDLAGGNVNGVKLVHMADFLISQEY >gi|333758476|gb|AFIH01000001.1| GENE 2152 2215177 - 2218296 3358 1039 aa, chain - ## HITS:1 COG:TM0025 KEGG:ns NR:ns ## COG: TM0025 COG1472 # Protein_GI_number: 15642800 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase-related glycosidases # Organism: Thermotoga maritima # 111 559 326 702 721 157 29.0 1e-37 MVDFLLKTVGPFFFGLGVSEADLKSYITTLQGYILAVLIALILMLVILILASVIKKQHKR FVRLQAVLNFFLVLVFVVNLVAYGPMHSNISGFLNASKVTIPEETRNHSKEVVKKVGEEG FVLLKNDDSLLPLQDEKNLNVFGWASTAPIYGGTGSGSSDTTNNEGILDSLKNAGYELNS DLTEMYKKYQDGRVSKGLNMKEQDWSLPEPTADYYTDDLMNKAKSFSDVAVVVLGRSGGE GADLPMDMRAIIDGKYNIAKEVSANPDKYGYFGASYKNNGSTPDFEEGQSYLELSKPEKD MLDTVCKNFDKVVLIVNANNPMELGFADDYNQIKSMIWAPGAGVTGFSALGEILKGDVNP SGRTVDTFVKDLQQTPYINNIGNHSYSNVDDLKKAIVAADESAEGNISFVNYAEGIYTGY KFYETAAEEGFLNYEDTVQYPFGYGLSYTSFTQSMENFKDNGNQLSFDVEVKNTGKVAGK DVVEVYFTPPYYNGGIEKSAVNFIDFGKTKLLNPGESEKLSFTINKEDLASYDSEGIKVK GGGYILEAGEYKISIRENSHKEIASESFTVAEDIDYSKNKRESDKVAAVNLFEDYTRGKF TVLSRKDHFANYKEACGPLSEDAYVMDDATRKAVEEQSFAYYDPTKYDNASDTMPNMEQK NGLKLYDLVGASYDDEKWDKLLDQMSFDDMGALINVGGWQTAAIKSISKPATVECDGPAG LNNFITQVYGTSFPGEILMAQSFNRELLGEIGEAIAAEFKAAGYYGWYGPAANTHRSAFA GRNFEYYSEDGVLSGHLASAEMNGAIKYKVYPYLKHFALNDQETNRCAFLLTFATEQTIR ENYLKGFEIGLKNYEGNIQAMMSSFNFIGTVAGSANPELLNDVLRKEWGFQGMVITDYDG SYGYMISDKSVRNGNDLMLGFAMADSNKFTDKSATAALAMRKACKNILYTVANSGVYDNG DPTGKMSNMDKIFLGVDILFAVLYLLCQFLLFKGWKKKKEALKLAAANPAAEVTTEVIKT EVIKTEEIKEEIKPDEPKE >gi|333758476|gb|AFIH01000001.1| GENE 2153 2218383 - 2218883 505 166 aa, chain - ## HITS:1 COG:no KEGG:BAD_1597 NR:ns ## KEGG: BAD_1597 # Name: not_defined # Def: PTS system cellobiose-specific IIC component # Organism: B.adolescentis # Pathway: not_defined # 4 164 22 182 191 141 50.0 9e-33 MDAIKKWIAAHPNLWEFILFNLLSNCATVTNFIMMWLCTGVIFTAWKTTPFRFLVFDYTS PESLMLCGFLSFLLATALAQTVNFFVQKNLVFKSDAAFEKAIPKYVIFAIFLVLVSAALP GYSQSLFIKMGISAALAPTLANIVNIVVQVLLSYPTMKFWIMPKGK >gi|333758476|gb|AFIH01000001.1| GENE 2154 2218871 - 2221324 2481 817 aa, chain - ## HITS:1 COG:YPO2803 KEGG:ns NR:ns ## COG: YPO2803 COG1472 # Protein_GI_number: 16123001 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase-related glycosidases # Organism: Yersinia pestis # 10 670 34 722 793 399 35.0 1e-110 MGENMKYSELIQQMTLTEKCAILSGKDEWSTREVKRLNIPFMTCSDGPHGIRRQAGAGDH LGLNASLPATCFPTAASIANSWDVNLGEAVGKALGEEAKVQDVNVLLGPGLNIKRSPLCG RNFEYFSEDPYLAGKMAASYARGIQSEGVYSCVKHFAVNSQETRRMAMSAVLDERTLREI YLTGFEIAVKEGKAKAIMTSYNRVNGIYANENEHLLKDILRGDWEFPGIVITDWGGSNDH TAGVKAGSNLEMPNPGLDSARILFRAVKKGEITEAEIDERVDELLSAIFETKESAKDKKA EFDIEAHHSLARKAALETAVLLKNEEHTLPLKKGAKVAIIGDFAFTPRYQGAGSSVVNTT KLEIGAELHAEYPEIEVVGMAKGFLRHGGEDLALEKEALDLAKSAELVLFFFGLDEMSES EGLDREHMEINNNQIALLSRLQTVNPNIVGILSSGAAVTMGHTVHLKALLHSYLGGQAGA GAIFDLLTGRANPSGKLAETYPIRGEDGPEYHYYPAKEKASEYREGIFVGYRYYDTTDTK VHFPFGYGLSYTEFQYSDLEVTEEGVCFRITNTGERDGAEIAQLYIGLPDSKIFRAKKEL KGFSKVFLKAGETKAVEIPFDDKSFRYWNNVTKRFEVEGGVYRIMVGASLTDIRLEGSIE KAASTDKLPYQEGGLEPYFSGKVTDISDACFEKLLGHPIPDSSWSGELDENDAICQMYYA KSGLARLLFKFLEGKKKEAERKGKPDLNILFIYNMPFRAIAKMSAGNVSMEMARAMLKVV NGHFFKGIGGLIGGWFRNRKENKAYEQALEGGKEWTP >gi|333758476|gb|AFIH01000001.1| GENE 2155 2221887 - 2222141 144 84 aa, chain - ## HITS:0 COG:no KEGG:no NR:no METKFTEKGFFNQHLKVQMDNSNINNGRNADVFSQILVGNVKSSLMDCLLNIGYIEYSGA AELLFRKSGNRLSCPTTKMFLMLL >gi|333758476|gb|AFIH01000001.1| GENE 2156 2222159 - 2222470 178 103 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKNKQGLRIILELVAGMVFSVILCCILIFLGYSTFYKDNFNEYTVNIFGLPIYEIVMQSG KGQGTAFNQNMFLVNIICSIITVIAVETTIFIKNKNKPEITEK >gi|333758476|gb|AFIH01000001.1| GENE 2157 2222460 - 2222795 112 111 aa, chain - ## HITS:1 COG:no KEGG:LMOf2365_1114 NR:ns ## KEGG: LMOf2365_1114 # Name: not_defined # Def: ABC transporter, permease protein # Organism: L.monocytogenes_F2365 # Pathway: not_defined # 1 99 146 244 249 75 35.0 6e-13 MIIGGIFAYVFKNPQILMTLGLVVMFVLYMFCGVFISIDQIPQLFRNISSYLPIKYAMND FFDIWNMEKFWDKDFLLISAVYLVISTIVLCICIIRENKRFIYSGGKNNEK >gi|333758476|gb|AFIH01000001.1| GENE 2158 2223385 - 2223492 176 35 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MHEKDGHEASVGSCALATKAGACLSPKGEFAQEPE >gi|333758476|gb|AFIH01000001.1| GENE 2159 2223616 - 2224860 929 414 aa, chain - ## HITS:1 COG:CAC1396 KEGG:ns NR:ns ## COG: CAC1396 COG0151 # Protein_GI_number: 15894675 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylamine-glycine ligase # Organism: Clostridium acetobutylicum # 1 410 1 413 416 328 43.0 1e-89 MRVLVVGNGGREDALCKKLQESPLCEKLYCCPGNGGTARYAENLSLGSNEEIVRFAKEHV DFVVVGPEKPLCEGLVDELEGVGVKAFGPKKKAAQLEGSKDFTKHFLEKYDLPTARYKTV FSYEEAVEALQDFSYPLVIKADGLCAGKGVGIFQEAAQAKQYLEDLFVKKIFGEEAKKVV IEEFLDGKEASLLCVVSGNRLFPLESARDYKRIYDGDLGDNTGGVGCYSPNELFNAELKE KIEKVLKKISYGLEQEGLQYSGILFIGFMIMRGEPKILEFNVRFGDPETEVILPRLQSDL LLLMDKAISHSLRVEDFQWSEEACMTVVMTSKGYPHAYEKHKRITGEITDPTIFVYHNNT VLEEGAAYSDGGRVLSVTTMGDSLSACREKIYAHIGEIHFEGACYRKDIGIPVE >gi|333758476|gb|AFIH01000001.1| GENE 2160 2225009 - 2226526 1515 505 aa, chain - ## HITS:1 COG:CAC1395 KEGG:ns NR:ns ## COG: CAC1395 COG0138 # Protein_GI_number: 15894674 # Func_class: F Nucleotide transport and metabolism # Function: AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) # Organism: Clostridium acetobutylicum # 1 505 2 499 499 483 52.0 1e-136 MKTALISVFDKNGIVEFCKGLKDLGFQLISTGGTYQLLKKEVEVKEVSELTGFPEILDGR VKTLHPRIHAGILYRRESALHQKTVEELGIDSIDLVVNNLYPFEKVLKKEGVSEEEQVEN IDIGGPSMIRAAAKNFQDVLVVTDAGDYEEVLLRLREGRNDLSYREQMAAKAFRYTAYYD ALISEYFSNRLSVANPEYLSLSYRLGTSLRYGENPHQNAAFYEKVYEENPAEWKQLHGKE LSYNNYTDMYNAVRFVKEFSEPAVVGTKHNNPAGIGIGETIDEAFDKAYACDATSLFGGI FALNRPVTKHIAEVLHSFFMEIVIAPDYEEEALSILEEKKNLRVIVMPNLSTFSLPKKTV KEVLGGILVQDYDNANLTEEMEVVSARKPTEEEMRNLLFGFKAVKMVASNGAVLVKDGAT LGIGQGQVRRTWAVEDALSHGEGKHSGAVLASDGFFFADTVELLQKHGIRAAIQPGGSVK DPEVIELCDQYGIALVMTHIRHFRH >gi|333758476|gb|AFIH01000001.1| GENE 2161 2226523 - 2227128 522 201 aa, chain - ## HITS:1 COG:CAC1394 KEGG:ns NR:ns ## COG: CAC1394 COG0299 # Protein_GI_number: 15894673 # Func_class: F Nucleotide transport and metabolism # Function: Folate-dependent phosphoribosylglycinamide formyltransferase PurN # Organism: Clostridium acetobutylicum # 1 191 1 197 204 177 48.0 2e-44 MKKIAVFISGGGTDLQSLIDNVHEKSGVISLVVSSREDAYGLERAKQKGIETMVLPKGDY DSALLEELKKREVEWIVLAGFLKILTPAFIRHFPRHIVNIHPSLIPAFSGPGFYGMRVHE AVYRAGVKWSGATVHFVSEVVDGGAILLQEVVPVLEADGPEEIAGKVLEVEHRILPAAVK ACLEDRVFWQGERAFIREEKV >gi|333758476|gb|AFIH01000001.1| GENE 2162 2227125 - 2230796 2810 1223 aa, chain - ## HITS:1 COG:SP0045_1 KEGG:ns NR:ns ## COG: SP0045_1 COG0046 # Protein_GI_number: 15899990 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain # Organism: Streptococcus pneumoniae TIGR4 # 1 932 1 947 948 780 46.0 0 MDKRIFVRKREQYRQEEEKLVGELFRGLSIPVKSAAIYQIYDVYSIEEEVLKRAEQSVFS EVMVNEVFEELPLQESFYFAYETLPAQFDQRADSAMQCIRLLDAESKAFVRSGTLLVFDR SLSPSEMEKISKYLVNPIESREKDMSVLSFSPDAERKEMRDMSGFRRLSTEALAALKTEM NLSLLMEDLLFIQEFYRGEERDPSETELYVLDCYWSDHCRHTTFETVLDKISVESEHFQK EMEEAMQEYLSLRKELGTEKPITLMDMATIVGKYHRIILKDQTVEVSSENNACSFFTTVR HDGKDEQWLIQFKNETHNHPTEIEPFGGASTCIGGAIRDPLSGRSFVYQAMRLSGAGNVL EGREKTLPNKLPQAEISKKAMQGYSSYGNQIGLATSFVRELYDDSYVAKHMEVGAVVGAS PVENVRRELPAPGDLVVLIGGRTGRDGIQGASGSSVVHTSASLHTMASQVQKGNAPEERK IQRLFRRPEVSRLIKKCNDFGAGGVAVAIGEISPGMEIHLDKVLLKYQGLNATEIAISES QERMAVVVSEKDYASFVKACEEENIEYAHVATVTGRNRLEMFMGKERVVDLKASFLETSG VRQHREAVLTDHPEENPFLHHGFHKDDAVKELSEKNVASQKGLATNFDSSIGATTVLMPF TGKEELTPTQASVQALPTLGFDSDIATVLTYGFIPRISHYSPFLSALYSVLLSIAKVYAV GGDRKTLYLSCQEYFEKLGTDKKKWGMATEALLGALHAERALGISAIGGKDSMSGTFNDL HVVETLISFACSTVKVDQVLTPELKNCGNTLYFLPVVKDERGFPNIAETVAEYDLLHRYI SEKKVCSVYVLEEGSAFSALYKMAVGNALGFHVTMEELSDFQPGSMVIEARVTDLPFRKI GTVEEDILTNGEPLDKENLRRAYTGTFEKLYPEYVNLEKENCENLSTEMEREFFSPEKVE QVKVLIPVFPGTNCEYDSVRAFQKEGAEVETVIIRNKREHDLKESMEEFVEKLNGAHILM FVGGFSSGDEPDGSAKFIVNFLRNEKVKEAVHSHLKKKRLILGICNGFQALLKSGLLPYG EIRDLTEEDLTLYHNDCMHHVSTTAFTRVANTNSAWTRHFRLGEMHDVVFSHGEGKLVGK SIEKWKHLAAFQYADFDGNASLNGKFNPNGSLYGIEGMVSEDGLILGKMGHSERYGEGLY RNRRIPNPQNLFYSGVQYFKGAK >gi|333758476|gb|AFIH01000001.1| GENE 2163 2230920 - 2231936 817 338 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169632702|ref|YP_001706438.1| phosphoribosylaminoimidazole synthetase [Acinetobacter baumannii SDF] # 3 328 12 337 356 319 53 4e-85 MSLSYKEAGVDKEQGYKEVGLIKKFIKETYTSGVLSDLGGFSGLFSLEQEKISHPVLVSG TDGVGTKVVLAQKLDRHKTIGIDCVAMCVNDILCQGAKPLFFLDYIACGKLHAEKMAGIV EGVAEGCKRAGAALIGGETAEMPGVYREEDYDLAGFAVGIVDREKIIDGKKKVEEGDLIL ALPSSGIHSNGFSLVRKIIFDKMHLDLEKEQISGESLADILLTPTRIYVREVLHVLHAVD VHAMAHITGGGLPENLPRVLPEGLSVLIDESALPRLPIFTKLQEWGELSREEMFGTFNMG VGFTLFVRKEEEKKVLSMLPEARRIGEVVRGKGEVTIQ >gi|333758476|gb|AFIH01000001.1| GENE 2164 2231927 - 2233216 1202 429 aa, chain - ## HITS:1 COG:CAC1392 KEGG:ns NR:ns ## COG: CAC1392 COG0034 # Protein_GI_number: 15894671 # Func_class: F Nucleotide transport and metabolism # Function: Glutamine phosphoribosylpyrophosphate amidotransferase # Organism: Clostridium acetobutylicum # 3 419 21 459 475 355 43.0 1e-97 MSGLCGIFSFDKKNDITDLLEVGLYALQHRGQEGFGITTMEGQRVCELKRKGMLSEVLNQ QIIEDICGSAGIGFVKYLFSHNTKYEPMMPFVYQTDHGNSMIALDGTILNRNFNFCELVN KINGPLESFQDYMESLKGTYNLIYIDEGKMLIARDPYGVKPLCLGKLKDTFIAVSESCAL DAMNAEFLQDVEPGELILVEKGEYSVHRFAQKPHHLCLFEMIYIARHDSIIDGVSVYQAR YKTGERLYEECPTEADIVIGSPDSGLIAAKGYAKASGIPFVDGILKNRYIQRTFIKPTQE ERVSSVNIKLNAIKENLQDKRVILVDDSIVRGTTMKRIIKILKDAGAKEVHIRVASPKVV SNDIYAIDIPKNEQLIGYNKTVEEVRDYIGCDSLYYLSLEGLEDCCGNKGYYEKYFTGVD IFQEEAVCH >gi|333758476|gb|AFIH01000001.1| GENE 2165 2233227 - 2233706 577 159 aa, chain - ## HITS:1 COG:PAB1077 KEGG:ns NR:ns ## COG: PAB1077 COG0041 # Protein_GI_number: 14521838 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase # Organism: Pyrococcus abyssi # 2 157 8 163 174 162 53.0 2e-40 MKVALIMGSISDEEIVKKSAAVLKDFSVEYDCRVISAHRSLNLVLDYVESMEQNKIDIII AFAGKAAHLAGVLAGLSIKPVIGVPIQSSCLDGMDALLSTVQMPKGVPVATVAINGAENA AILAIEMLALSNPDLKEKLRQYKEKMKQSVQEMNERISL >gi|333758476|gb|AFIH01000001.1| GENE 2166 2233966 - 2234655 850 229 aa, chain - ## HITS:1 COG:SSO0626 KEGG:ns NR:ns ## COG: SSO0626 COG0152 # Protein_GI_number: 15897542 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase # Organism: Sulfolobus solfataricus # 1 221 3 211 233 110 33.0 2e-24 MQKIYTGKTKDVFKLEDGNLVLKFKDDVTGENGVFDPGANAVALTIEGVGKEDLKCSKYF FELLRKNGVKTHYVDANVAENTMTVLPCEVFGKGLEVIARFIATGSFIRRYGAYIQDKTV LPGTFVEVTLKDDQRNDPPISEDALDMLGILTKEEYKELKEKTKEITGIIKEDLAKKGLT LYDIKLEFGRHNGEVILIDELSGGNMRVFDGDSYVEPLKIYSYLEKGTV >gi|333758476|gb|AFIH01000001.1| GENE 2167 2235030 - 2235848 694 272 aa, chain - ## HITS:1 COG:CAC2076 KEGG:ns NR:ns ## COG: CAC2076 COG1189 # Protein_GI_number: 15895346 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted rRNA methylase # Organism: Clostridium acetobutylicum # 1 272 1 266 267 303 56.0 2e-82 MGEKKERLDVLLVEKGHFDSREKAKRAIMAGLVFVNGEKEDKAGTTFPLTAEILVKGNPL PYVSRGGLKLEKALKSFPIELKDRICMDIGASTGGFTDCMLQNGAKEVYAVDVGHGQLDW KLRNDERVHCMEKCNIRFVEETDLGEKPSFFSIDVSFISLKLVLPVVKKLASLPGEVVCL IKPQFEAGREQVGKKGVVRDPKVHEEVIRTVLEFAASIGFSIEGLSFSPIKGPEGNIEYL AYLRYEGEESRSFPEGMEEKIHAITEESHRAL >gi|333758476|gb|AFIH01000001.1| GENE 2168 2236032 - 2236241 282 69 aa, chain - ## HITS:1 COG:no KEGG:Lebu_0827 NR:ns ## KEGG: Lebu_0827 # Name: not_defined # Def: hypothetical protein # Organism: L.buccalis # Pathway: not_defined # 1 65 1 65 67 74 67.0 1e-12 MSKEGEFFIYLLERYADFKKEKASEILKLWDRIGLTNLIYDLYEIYHVERLENAFEDIDK LLQKKLAQA >gi|333758476|gb|AFIH01000001.1| GENE 2169 2236234 - 2236488 180 84 aa, chain - ## HITS:1 COG:no KEGG:Tresu_1092 NR:ns ## KEGG: Tresu_1092 # Name: not_defined # Def: hypothetical protein # Organism: T.succinifaciens # Pathway: not_defined # 11 79 26 94 96 80 53.0 2e-14 MTEVNARTRDFFDRQVIYLIKAKYGMEDMKAIRSFLFSETYQMLLDPLTEVYSFSPQIVF EMWESEMITGDPRNSQYIRGEENE >gi|333758476|gb|AFIH01000001.1| GENE 2170 2236485 - 2236961 274 158 aa, chain - ## HITS:1 COG:no KEGG:Lebu_0829 NR:ns ## KEGG: Lebu_0829 # Name: not_defined # Def: hypothetical protein # Organism: L.buccalis # Pathway: not_defined # 1 152 1 154 159 173 55.0 2e-42 MKLFHGSNVIVNTPRILTKLRALDFGAGFYLTSSKEQARKWAKAVTRRRGEGDSIVNIYE LEDEFYSKLSVLEFPTANAEWLDFVVQNRKEKRACSYDLVIGPVANDSTLPVIDDYMDGK YDKEEAVKRLLPQKLTDQYAFLTEKAIRFLTFEGSEKG >gi|333758476|gb|AFIH01000001.1| GENE 2171 2237360 - 2239234 1974 624 aa, chain - ## HITS:1 COG:CAC2077 KEGG:ns NR:ns ## COG: CAC2077 COG1154 # Protein_GI_number: 15895347 # Func_class: H Coenzyme transport and metabolism; I Lipid transport and metabolism # Function: Deoxyxylulose-5-phosphate synthase # Organism: Clostridium acetobutylicum # 2 613 4 611 619 621 51.0 1e-177 MLLENISGAEDVRKLSLKEQKILAKEVRRFIIEKMADNGGHLASNLGVVELTIALFHTLN LPKDKIVWDVGHQCYTHKILSGRRDDFALLRKFKGISGFPKREESPYDCFNTGHSSTSIS AALGIAEGRDLLGEDYTVLAVIGDGALTGGMAYEALNNASKMKKNFIIILNDNEMSIAKN VGGMSTYLNGIRSHKGYTRFKENLASSLGKIPVIGDRLVERLKNTKNSIKQLLVPGMLFE NMGLTYLGPVDGHNLHALEQVIHEAKRIDHAVLVHVVTKKGKGYVPAEQNPSVFHGVGPF DIATGKSKKESTEKSYTDIFAESLIKEGKEDARIVAITAAMPDGTGLTKFEKAFPKRFFD VGIAEAHAVTSAAGLASAGLKPVFAVYSSFLQRAYDQMVHDVCLQKLPVVFAIDRAGLVG ADGETHQGIFDISYLRSIPNMTVMAPKNARELTEMLHFALQFQGPIAIRYPRGTAYQGFS EKQEPIEYGKAEILIEEQTGKIALLALGSMVSTGEHIVEKMAKKGVNLSLVNARFAKPID TEMLDKLSEKGYRKILTLEEGVRSGGFGEAVLSYMETHHKEVAVENITLPDAYVEHGDVS TLRKMLKIDSDSIIEGLEEKGFFK >gi|333758476|gb|AFIH01000001.1| GENE 2172 2239295 - 2240302 851 335 aa, chain - ## HITS:1 COG:slr0739 KEGG:ns NR:ns ## COG: slr0739 COG0142 # Protein_GI_number: 16329282 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Synechocystis # 3 288 12 281 302 184 43.0 2e-46 MSIKEALGKKKEAVEAILQRFLAEEKGFDRTGREAMNYSLMAPGKRIRPILVEEAFFLCC KEEEKEVLLPILHSFMAAIEMIHSFSLCHDDLPAMDNDRVRRGQDSTWAHFSEAQGILAG DALSLYAFQAVLETFQKEKRKNPLLSRYEGRVLSALLVLSRESGIDGMVGGQVVDLEKEG QPLSEEELFFIMEKKTAALLRASLLMGAILGGAEEKVQEKIAFYGENLGLAFQIRDDILD EISTTEELGKPVHSDKEEGKITAYSLYGREKAEEKVEEYTEKAISALENLHRERLAEICQ ADVDGDNAYLFLKELALYLASRKNKVMKFSFLGMI >gi|333758476|gb|AFIH01000001.1| GENE 2173 2240302 - 2240595 410 97 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIEGNEEKKAVVEDGQVVFTPDTKVDKADNAKKAEKKKDLSEIFTDLDGLLQKMEGEESL EKSFAIYEKAVALLKEANSSIDRIEKQVRILDGEEGK >gi|333758476|gb|AFIH01000001.1| GENE 2174 2240710 - 2242119 1315 469 aa, chain - ## HITS:1 COG:BH2783 KEGG:ns NR:ns ## COG: BH2783 COG1570 # Protein_GI_number: 15615346 # Func_class: L Replication, recombination and repair # Function: Exonuclease VII, large subunit # Organism: Bacillus halodurans # 10 466 9 449 458 297 38.0 3e-80 MERTSKKEYTVSQVSRYLSRMMQEDFFLSHLTVSGEISNLKMHPSGHIYFTLKDQASQLS GIMFAGKRAGLGFRLENGMKVLCTGRIGLYEQGGIYQIYADSFQLAGQGDLHLRFEALKK ELMEMGLFDPMYKKPIPKYARRIGVVTASSGAAVRDIVQIARRRNPFVEITLFPALVQGE GAVASIVRGIERLDKLGLDALIVGRGGGSIEDLWAFNEEAVAKAIFDAETPIISAVGHET DTTIADFVADLRAPTPSAAAELAVFDYMQFVDDLSSYTYSFHERIEKKILFLRQRLKEKE LKFSVLHPKAILQGKQHRLLDLQNRLQNQMRKSLQSAKENLQDYGNFAKLMERRLSEDKA RLSRYQSFPHLMEEKLLKARHRLINYQDFPHFMEEKLAESRHRMQLLSEQFDALSPLRLL SNGYSYVRDEEGRRVSSAEKLQKGELLELHFSDGSAKARVEEISNKKSR >gi|333758476|gb|AFIH01000001.1| GENE 2175 2242123 - 2242665 503 180 aa, chain - ## HITS:1 COG:BH2785 KEGG:ns NR:ns ## COG: BH2785 COG0781 # Protein_GI_number: 15615348 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Bacillus halodurans # 51 147 36 132 134 76 37.0 3e-14 MNKREERSHKFKLLFSTLFYEGEEKEEQISHYSFEKEEDDEDVIAFDCLPDEEKAYLEAE VLKILERLPELDSMINADTEGWTTKRMSKTDLTVLRLSLYELKFQEEIPKKVVLNEAVEI AKKYGGADSGSFVNGVLARILPKLSPELSDSTEKKEKKSEKKGKKEQKNSSFHIVLNKKD >gi|333758476|gb|AFIH01000001.1| GENE 2176 2242658 - 2243035 523 125 aa, chain - ## HITS:1 COG:lin1395 KEGG:ns NR:ns ## COG: lin1395 COG1302 # Protein_GI_number: 16800463 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 1 125 1 126 135 81 38.0 5e-16 MEDEKNIQIEGNKSLGDVVIANEVLAIIAGIAATEVEGVHSMDGGWSGEFISKLGIKDLA RGVKVQVKEGEVKVDLSLNMEYGYAIPKVSDLVQDKVSASINNMTGLNVSEVNIRISGVV DKENE >gi|333758476|gb|AFIH01000001.1| GENE 2177 2243147 - 2245471 1244 774 aa, chain - ## HITS:1 COG:BH1905 KEGG:ns NR:ns ## COG: BH1905 COG1501 # Protein_GI_number: 15614468 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-glucosidases, family 31 of glycosyl hydrolases # Organism: Bacillus halodurans # 83 696 76 668 773 317 32.0 5e-86 MSTKVDYNEQTGKRRSLYPASEDYILKAIHADDSQKEKGEISFLLLTANGNNACLKLRFL SKKIVKLHLFLSDSKGQALFPIRSTKQVFTFSKNGDVPVTFRDGDNAWIAETGDVTLRFR KDYWKMEAFVQNEKILEEGVTDANVDNRWKMLPLGFTLEDGKAVAVRENFSLGSDEAIWG LGEKYTSMNRRGHVYQIRQVDALSTDSEKAYLGEPFYLSSKGYGLFCNSFSESMFDVGAS STLSLQIGVKDADLDLVLILEGKEKYREIIEDYIELTGEVPLIPKWALGYWQSKCTYHTQ DEVMAIAERADKLHLPLDVIHIDDWQGAINAGTLKWDKTAFPNPVGMIHALHEKHIHLSV WTFPYVNDNCPEFCKLEEQGFFVRNTRGETALFYATADSKNKVACYDFTNSAFVAWYRER IFAILRDGVDVIKTDFSEALPEDVILFDGSTGTEAHNKIPFLYTNLIYDTMREAFKGTEK IPLIWSRSGYLGAHRIPAIWAGDSSSESAGLSALIHGGLGLSACGTPYWGYDLGGFFLTG LDGNECLPSEEQYLRSFVTGMFLPLARAHGKTAREPWNISENALEVARKYDVFRHRLIPY LWHTAIEAHLTGIPMLRPLYFEYPGDRQAVREDLEYMLGDSLLVCPPFERSSYRVYLPKG RWTNLFTGEVLQGGTDVEVHPKIDEIPVFVRDGSVLEMLPEESNGVWHVSAGEAEKTELL VFTGRAMEKTLYDAVNRDGKVLTMKKQIVVLQREDGSLYIPEEIGKQYRYVKIL >gi|333758476|gb|AFIH01000001.1| GENE 2178 2245488 - 2246345 352 285 aa, chain - ## HITS:1 COG:lin2527 KEGG:ns NR:ns ## COG: lin2527 COG0627 # Protein_GI_number: 16801589 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Listeria innocua # 1 271 1 251 252 112 29.0 8e-25 MAHFTCNFLSYTLNRAINIDVIIPGVTSTEAGERDVTHRMKYKYPVLYLLHGYCNDYSTW ERYTSIERYAEERRIAIVTFSAENSMYVNVGKFTGCEDPSGWIVAADYEKLLLEEIPDFV TSMFPVTENPKDTYIAGLSMGGYGAMCNGFRNPERFCAIGAFSPLTTIGTLGEDGKEENP VVPENLYNYEPELLMRKAVLAKEKGKIKSVPSLYYCYGTEDFLKKKQDWFSELLQKEFSG KLKIEQEILSGYGHEWAFWDLEVRKFLDWIPRTDEYYLEQPIRRI >gi|333758476|gb|AFIH01000001.1| GENE 2179 2246349 - 2247185 560 278 aa, chain - ## HITS:1 COG:Cgl2406 KEGG:ns NR:ns ## COG: Cgl2406 COG0395 # Protein_GI_number: 19553656 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Corynebacterium glutamicum # 13 278 37 304 304 271 53.0 7e-73 MKETRNITSVLFYIIMTLLAVFFIFPIALVVMNSFKNKLYISTTPFAFPDAESYVNIKNY VDGLAKIHFLSSIGYSVFITVISVVLIVLFCSMTSWMISRVKGKLSSSLYYLFIISMVIP FQMVMYTMTKVANTLHLDNFVGICVLYLGFGAGMAVFMFCGFISGIPIELEEASLIDGCN PFQTFFKIVLPVMKPITITVGILNAMWIWNDFLLPYLVIGTKYKTIPVAIQYLKSGYGSV DYGHLMSVIVIALIPIVVFYFACQKYIIEGVTAGAVKG >gi|333758476|gb|AFIH01000001.1| GENE 2180 2247182 - 2248033 453 283 aa, chain - ## HITS:1 COG:Cgl2407 KEGG:ns NR:ns ## COG: Cgl2407 COG1175 # Protein_GI_number: 19553657 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Corynebacterium glutamicum # 1 281 1 280 281 281 53.0 8e-76 MEKTYKKYYGWFVIPTLIAYGIAFVWPFVMGVGLSFCKFKTLKNAKFVGLSNYIYALTDS KGFLSALWFTVKFAVVGVISANLIAFALALVLSKNRRGTNAYRTIIFMPNLIGGIILGYI WQLLLNGILIRLTGNDITFDAKYGYWGLIILYNWQKIGYLMIIYIAGIQAIPGDLIEAAR IDGANAKQILRRIIVPLVSGSVTICMFLSLTDCFKMYDQNLALTGGAPANQTTMLALNIF NTYYNRKGFAGIGQAEAVIFTIIVLAISIIQLRVSRSREVKEV >gi|333758476|gb|AFIH01000001.1| GENE 2181 2248279 - 2249685 1319 468 aa, chain - ## HITS:1 COG:Cgl2408 KEGG:ns NR:ns ## COG: Cgl2408 COG1653 # Protein_GI_number: 19553658 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Corynebacterium glutamicum # 36 461 17 439 443 324 43.0 3e-88 MKKKLIGVTLCMSMMAVALAGCGSSSSTAGSKATEAAKADVAKEGASDFTGTIRWLNYKP EIADQLVEVAKAYTDETGVNVQIETAASNTYEQTLTARMDSSDAPTIFVCDSMKMLNEWQ DYCADLTNTKLNGFVSDQTYTLKKDDKVYGISYALEGWGIIVNKAITDDYFASPNKKTEY TSLDDLYTFDALKAVVEDMQSMKDELGIEGVFGSTSLKAGDDWRYQTHLMNQPLYWEWGG NDKIDLNGLIPEFKFEYNKNFKDILDLYLNNSVIDKSLVGTKTVDDSMAEFALGKCAMIQ NGDWAWSTIAGTDGKKVNDKDVCFIPITCGVEGEKDMGLNVGASQYMCINSQLDQKDQDA ALAFLEWLFSSDTGKQLVAQKLQLVTPFTTMADAEYTNPLFESENDIAGKGKKAYCWAAN LIPDDQWKNDYGASLLQYAQGQKDWDAVVSDAVTEWETERKITNEAAK >gi|333758476|gb|AFIH01000001.1| GENE 2182 2249935 - 2250060 121 41 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLYRKKGTEDWHFLAHMDPGFIEDELEDILEDLERLPDDLL >gi|333758476|gb|AFIH01000001.1| GENE 2183 2250129 - 2250506 320 125 aa, chain - ## HITS:1 COG:no KEGG:Arch_1039 NR:ns ## KEGG: Arch_1039 # Name: not_defined # Def: hypothetical protein # Organism: A.haemolyticum # Pathway: not_defined # 1 123 1 123 187 141 56.0 8e-33 MFILELNQEGMETEIAVFRTIEEGRAFISQVDGYRCEEEEGFLYESLDIRKLPKYLELHY NGNIVPFSKFMFTEEGDIDIFWKEIPDLSSPGDGMVEGCTRVDAYAIPNEEVKDYIEKRE FQYKK >gi|333758476|gb|AFIH01000001.1| GENE 2184 2250527 - 2251903 1111 458 aa, chain - ## HITS:1 COG:SP0604 KEGG:ns NR:ns ## COG: SP0604 COG0642 # Protein_GI_number: 15900512 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Streptococcus pneumoniae TIGR4 # 1 458 10 438 442 325 39.0 1e-88 MFIQLFSILGIIILLIHLLVFFFFPVSYLEQRKEAITNRANEVSAGMEGKSLTDIENTLA LYSKSSDIQAFVKKGAESRSIPVDANIPIDDTVPIDFDSKTNSMIIEEREIQTDRGNKLI LQFISTADMQKEAKELSLQFLPYSLAISLLFSIVVSLVYAKAIKNNISEIKNETDKMIAL NKEACLPVDTKDEVGELKEQINTLYRSLLQSIENVETKNQEILKLEKLKYDFLKGASHEL KTPLASLKIILENMQYNIGKYKDRDLYIGECIATVDSLSQSISRILSVSSLENLKEDEES LEIQPVLLSVLEKYEVLLQQKKLHLQNRLAGEKLYIGRPALKIILSNLLSNAVKYTEEGG TIEIYAKEGLLYVENSIHPSYGRKQEKRYFEKKEGSREHSKGTAIDTEKLCIMNFDLNKE NSNGLGLYIVSTLLKNYKIPYEASERDGKFIFCIKLSR >gi|333758476|gb|AFIH01000001.1| GENE 2185 2251927 - 2252580 598 217 aa, chain - ## HITS:1 COG:SP0603 KEGG:ns NR:ns ## COG: SP0603 COG0745 # Protein_GI_number: 15900511 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Streptococcus pneumoniae TIGR4 # 1 217 1 218 218 259 61.0 2e-69 MNILVVEDDQRIREGIAAFLSEFGYTILEAKDGREALSKFNKEIHLVILDIQIPFVNGLE VLKEIRRQSKLPVLILTAFSDEEYKIDAFTHLADGYMEKPFSLPLLKARIDSLIQKSYGQ TDKFLYKNVEVDFSGYTAKLDGKPVDMNAKEVEILKYLSENEGRALSRTQILDHVWKEME EIPFDRVIDVYIKELRRKLKLDCIFTIRNVGYKLEKE >gi|333758476|gb|AFIH01000001.1| GENE 2186 2252582 - 2253514 818 310 aa, chain - ## HITS:1 COG:MJ0750 KEGG:ns NR:ns ## COG: MJ0750 COG0348 # Protein_GI_number: 15668931 # Func_class: C Energy production and conversion # Function: Polyferredoxin # Organism: Methanococcus jannaschii # 102 291 58 229 238 80 31.0 3e-15 MDKLKEFINGKTKKDKYKARNNIRHLFQSFWFLVTNSFFEGFKTGKIYSGELKQLCVPGM NCYSCPGAKGSCPIGALQAVIGSPKYKFSYYVVGFLFFVGALIGRGVCGYLCPFGLVQDL LHKIPFVKKIETFKWDKPLRKAKYLILLVFVILLPLFLVDIIGQGAPYFCKLICPVGMLE GGIPLVWMNTSMRGAVGFLYAWKGLILLLTILLSVIIYRPFCKYICPLGAIYSLFNSVSF FRYTLDHQKCIHCGRCKAVCEMQCDPVQNCNDLECIRCGKCKNACPVDAIACGVTRPKEQ AGAAEVKVKA >gi|333758476|gb|AFIH01000001.1| GENE 2187 2253507 - 2253659 91 50 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227874129|ref|ZP_03992335.1| ## NR: gi|227874129|ref|ZP_03992335.1| hypothetical protein HMPREF6123_2274 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_2274 [Oribacterium sinus F0268] # 1 50 1 50 50 65 88.0 1e-09 MKQNILKSRLTSLVLLCMGIAMMYIGVHRGEALVVMNKAIRVCMECIGIG >gi|333758476|gb|AFIH01000001.1| GENE 2188 2253767 - 2254966 1477 399 aa, chain - ## HITS:1 COG:no KEGG:FMG_0299 NR:ns ## KEGG: FMG_0299 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 1 399 1 382 384 433 60.0 1e-120 MVKTQFKGAFLVLGLCVSLSFTACQNKGAAEPTSTETKSAEEKATGEQGLVVSPEDAGVS VNKDSNGDSFKPADYTLPVKDEYVYEYLGLQFSLSEKIKEAMKTKDIVMLDDQSPIDQDL KYGLLSFSKLTEEQKNAEVGKMGDGYEKWQESLERIGTIGMFEKSLSEEEIGKITKCDSR TKLGESKDGKYSYYLSVNSTADVETIEELKQTTVEITEKKERPDNGFVLSEKSDLEGDMA FSADSQNAVTDLSNLQTKDIDGKEFSSKDFANYDLTMVNVFATWCSPCVQEIPDLAEIQK EMKDKGVNIVGVVTDTVDQTGENREALEKAKLIRERSKAEYPFLIPDQSNFNGRLSGIQA FPETFFVDKKGQIVGETYSGSRNKKAWMEIIEKELAKVK >gi|333758476|gb|AFIH01000001.1| GENE 2189 2255182 - 2256033 483 283 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0424_1228 NR:ns ## KEGG: HMPREF0424_1228 # Name: not_defined # Def: hypothetical protein # Organism: G.vaginalis # Pathway: not_defined # 6 278 9 281 286 415 77.0 1e-114 MPKGNKDTIEAKGFTIQIYTEDFKNDYISLTDIARYKNAHEPKDVVKNWLRVRDTIEFLG LWETIHNPSFKGVEFDSFRKEAGTNAFTLSPQRWIENTNAIGILSKSGRGGGTFAHPDIA MEFASWISAEFKLYLIQDYKRLKSDENSKLSLGWNLNREISKINYKIHTDAIKEYLLKDL TNEQLSYQYASEADMLNVALFNKRAKQWREENPDLKGNMRDYASLNELLVLANMESYNAI LIGKGMDQKERMIELRKLARTQLLSIEKLNNTGIKSLEDKSKQ >gi|333758476|gb|AFIH01000001.1| GENE 2190 2256298 - 2257299 1136 333 aa, chain + ## HITS:1 COG:MTH1727 KEGG:ns NR:ns ## COG: MTH1727 COG0226 # Protein_GI_number: 15679719 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, periplasmic component # Organism: Methanothermobacter thermautotrophicus # 63 330 29 269 271 112 32.0 1e-24 MKKQLSLLLGGLLLASSLVACGAKGSTASTTAAASDKETAAESNTAKEGESKAEASSDSS DFKAQILFCGSTSLYPIMSSLASSFTEKYETWDKVDASFPKENISIYVAPGGSGVGVKAA VDGTADFGMLARDIKDKEVESLGKDYKSFEVAKDALTVSVSSKNPNADKLENLDTETLQK IFDGEYTKWSQVDSSLSDDEIHVYIRDLSGGAYEVFQKAVMGDKEITPSATQSASMTELA TNVANDPNGIGYVGFGAFNKANKESTVLKEIKVDGVEASEEKILSGDYKIQRPVMFVTGK KITKNEQAFIDYVFSETGYDAVVANGYIPAFTK >gi|333758476|gb|AFIH01000001.1| GENE 2191 2257442 - 2259346 1245 634 aa, chain + ## HITS:1 COG:MTH1729 KEGG:ns NR:ns ## COG: MTH1729 COG0573 # Protein_GI_number: 15679721 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, permease component # Organism: Methanothermobacter thermautotrophicus # 5 280 6 271 291 137 32.0 8e-32 MRNLKSRKLENSLFLFFVYAFLFLSTGILSFFFLFLAKESLPLFESVSLPSFLFSAKWNP MAFTGTASFGIFHFLMGSISVSFLALLFSTLLSLGCSIFFAFYFWEKGRRILYPLLDLLS GIPSVVYGFIGLTVGKPLFLKMGVSTGSCILLAAVLLSILIFPFMVDSITDSMVKLKAKY FLEARALGLSPAYIILRLILPSSLRSIFMAFLLGSGRALGETMAVMMVVGNANLFPKLLS KGETIASLIALEMGSAEHHSLHYHALYASGLVLLLLVALLHLLVKMGEKPGVLLHIFRFG KKNALQDGISRNASKSSHAVDTDTVTAESPSVHSPENREKVAPRLLATGKRAKASRSFSA ILLFLYSFLSFLLIFSALLFFFLYIFYKGNKVISPSFLLDTPKGMVLGEEGGIFPAITGS LAFSLTALVLSGLPSLFTALFMVFYAKEGRKKESLHFFIHLLSGVPSIVLGLFSYSLFVY QLKLGRSVLSGAIALAIMIFPFMEIRMEKIFEEVPKSYLHSSESLGCSKGYTLRKLVLPY TLPELLSTMLLAFCFALGATPPILFTGGVAFAKSPTSLLSPAMALPLHLYLLLVQGGSSL SRAYGTALVMLFLLLIGNGIASLLTAYCHRKWKR >gi|333758476|gb|AFIH01000001.1| GENE 2192 2259519 - 2260295 231 258 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 16 241 5 223 311 93 31 3e-17 MSTESTNPILSTNPILEVKNLSLSYGKRQILRNLHFQIPEKSITVFLGSSGCGKSTLLNS LNGLLLENKEASMEGEIFLSGENLTNKKEKRLEQIAMVFQNPSPFPFSIYKNMTYALEYY GIKNKAEQKKLILQKLKDVGLWEEISGDLHRSALSLSGGQAQRLCIARALCIEPKILLLD EPCSSLDRLSTLKIEELLQNLKERYSMIIVTHNLSEAKRIGDQILFFHEGELWESGTKEE FFTHPKRPETKEFIEGEW >gi|333758476|gb|AFIH01000001.1| GENE 2193 2260320 - 2262251 1729 643 aa, chain - ## HITS:1 COG:BS_mcpB KEGG:ns NR:ns ## COG: BS_mcpB COG0840 # Protein_GI_number: 16080178 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Bacillus subtilis # 208 643 232 662 662 159 28.0 2e-38 MMLMVGFFALYFYQSTRDLMAQSERSLEAIVSKSIEKEIADNLDFTEANVKAVVENQKVQ ELFAKRDREGLYEYMLPTYKSMKEEFPQAHFHLPDSVSFLRMNKPEKFGDSLKDFRFTVN EANSTKKTVKGIEAGVSGFGFRVVMPVFYEGTHIGSFEYGRELEHSFLETLKESYNGDFL LYKLEDGEAKYISSTISEDEIAFPYPEKLDAIQNGEVVFMTSEDETQNYYCLPLKSFDGK TLGFLEFVDDRTDLVMQEKETFRKLGMVVLAMLIIIPILAMLFLTIAFRPLHALVKDAEV IAQGDFTKHFATNRKDEIGMISKSLDHISGGLKEMFHVIGDMSYKVVNNSEEISVTGEKL SASNREVFQNVVDASTLASEQHVSVEHAKSDVQFMADRISALNESVKLINQSIDTVITST NEGTDASARIEESILDLQETSENNNVKIEKLNAGSVKIEEIVHTIRRIADETNILALNAS TEAARAGEAGRGLAVVASEVSKLADQSKTSTNSIATLIREIRGYIDSVVVSSKENNEKLI EGVSVVQESKATFGAISTEVQMVVSQITDITKMVEQIYEKIETLQTSFRDIVEKSDNTMN NIESVKQISESQTAAMSEITNSTTMLAEMSAELRQAVSKFKYE >gi|333758476|gb|AFIH01000001.1| GENE 2194 2262763 - 2263800 1066 345 aa, chain - ## HITS:1 COG:YPO3633 KEGG:ns NR:ns ## COG: YPO3633 COG1879 # Protein_GI_number: 16123775 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Yersinia pestis # 42 330 48 332 352 152 32.0 1e-36 MKKKVISALLVGSMALSLMACGGGNKATTTESSKAAAAGDTASSGEKNVVFMPKLVGIPY FTTCNEGAQEAAKELGITCTYNGPTTADAAQQVTMLEDYIAQGVDAIAVAPNDPAAMTSV LKKAKDAGILVMDWDTQADPSLTKVSVCQVNDQKFGEHMVDKLIEYMGTDSGQIALVTGG LSAANLNAWIKASKDYLAKKYPNIEIVNNGDPYPTDEKQDVAYSTTKDIMKAYPNVIGIL GYSTPSAPGCGEAIRDLGLQDKVTLVANGVEADIQDVLSDGSLDCGNLWNTQDLGRITMA VASYLLQGNELKNGEKIPGWDQPIILSEDGHNVYMTESGTDYEKK >gi|333758476|gb|AFIH01000001.1| GENE 2195 2263880 - 2264893 705 337 aa, chain - ## HITS:1 COG:AGl81 KEGG:ns NR:ns ## COG: AGl81 COG1172 # Protein_GI_number: 15890147 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 12 314 30 338 346 172 35.0 1e-42 MFFKGIREKRRNEMVLFLIFIILFVLMSVLSPNKFLSSTNLQNMCFQMPEFGLMALAMMA AVLTGGMNLSIITGSMLSAIVAGFFMSSEFSKANPVAGTILGILIIMGISLLTGIVNGYL IGYVGCVAMLITLGTRMIFEGIGLRLTKGGSVSGFPEQFSSIGSATIGWLPVTILIYLLM VIVTYFLLERSRFGHEVYMLGSNEVATRFSGVNTRRVIFLVYVFSSFCYGLSGVLISAHY VSAKVDYGSSYLMQAVTAVVLGGTSINGGEGTVAGTVIAVMIMQTISTGLNIFGTDRYII NIITGGILIAVLAIRHITGILSDCRKIAARKEKSSAT >gi|333758476|gb|AFIH01000001.1| GENE 2196 2264906 - 2265808 695 300 aa, chain - ## HITS:1 COG:YPO2499 KEGG:ns NR:ns ## COG: YPO2499 COG1172 # Protein_GI_number: 16122720 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Yersinia pestis # 1 287 55 330 330 156 39.0 5e-38 MNNILDFIRSNAVYGIMAFGMLPVLITGGIDLSISSTIALCAVISGNFMLANPGSNIFVV MLLSMLVGSLVGAFNGFLITKIKIPPIVATIGTQTITLAAVLLYSGGIWISGLPEWFSTF GSFELGQIESAGNITGIYSQIILLIITGVLTSFILRNTLTGRGIYAVGGNMQSALRVGYK PDRILMFAYMFSGAMAGLAAIAHISIVGQVDPNTYLNYEMDVIAIIVLGGASLSGGIGNV FGTTLGIILMAIIKNGLVLVRVSTYYQKVVMGAIIVATIMMDAINTRLTEKNAIKVDVDV >gi|333758476|gb|AFIH01000001.1| GENE 2197 2265933 - 2267426 176 497 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 260 494 1 241 245 72 25 8e-11 MSEKFLELLNISKTFPGVKALDHVKFDIYPGEVHALVGENGAGKSTLIKILSGVQPPDEG GRIIIEGKEVHLKGPMDAIKRGISVIYQDFSLFSNLTVAENIGINEMIEKNQRILPWKEV NRKAKEALAFLKTDINPQDMVGHLSVAKQQMVAIAASVAQKAKMIIMDEPTSALSRSEVE RLYEIIEDLKKQNIAIMFVGHKMDELYHVADRFTVFRDGQYVNTVDAKQTAESELISMMV GRKIEVQSYLGEAKGEKKAVLRVENLCKSGNFKDVTFEARAGEILGVTGLVGAGRSETMQ AIFGINTADSGKIILDGQEVHIHSPKEALDHGIAYIPESRQTQGLILKKTIRDNILLPQL SKYANAFGILNNAKMRDAANQWIEMLDVRPGDPNNLAMQLSGGNQQKVVLAKWISTNARV LIVDEPTNGVDIGAKDEIHKILRDIANQGTAVIMVSSELVEVLACSDRVMVMRRGRVAGI LDNKDLTQEQIMNQSVS >gi|333758476|gb|AFIH01000001.1| GENE 2198 2267531 - 2269084 1089 517 aa, chain - ## HITS:1 COG:STM3674 KEGG:ns NR:ns ## COG: STM3674 COG1070 # Protein_GI_number: 16766959 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Salmonella typhimurium LT2 # 2 499 3 489 498 346 36.0 8e-95 MHYYIGLDNGGTTTKAALFDTNGKEIGVAGMSTASITPRPDFVERDMEEMWDANCQVIKE LLQKTGVSAADIAGIGVCGHGKGLYLWGKDGQPVRNGIISSDNRAYRYSKKWKADGTEDK VFEYSCQHIMPCQPVALLAWLKDNEPENYKNIQYVFECKDYVRFRLTGEARAEMTDYSGA NLMNLKTGEYDQRILELFGIPEIQKALPPLCRADEVCGHISSEAAAKTGLSEGTPVIGGF FDINAGAIASGVLDPSLICMIAGTWSINEYIRKEPVLDGKVQMNSLFALPEYYLIEESSA TSAGNNEWFVRELLPELKLQAKQEGRNVYDMMDEWVESIAPSEFVPIFLPFTMASNVHPN AKGSFIGISYSHKRKHLVRSVFEGITFSHRYHLEKLLATREEPAKAIRLSGGAAKAKVWV QMFADVMQLPVETLSANENGALGCAIAAAKATGEYKDLSEAVSHMSRISDAVMPNPAMKD IYDRKYRLYVRAIESLDSFWDEMQSLIESSDCEKDYP >gi|333758476|gb|AFIH01000001.1| GENE 2199 2269145 - 2270584 666 479 aa, chain - ## HITS:1 COG:BH1551 KEGG:ns NR:ns ## COG: BH1551 COG1070 # Protein_GI_number: 15614114 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Bacillus halodurans # 3 476 1 461 467 422 45.0 1e-118 MGVKYYLAVDIGASSGRHMLAHMEDGKICLEELYRFENAMDKRDGHKVWNTERLFSEIIT GMKKCAEKRKIPYSMGVDTWGVDYVLLDAAGKQLGECYAYRDKRLNGMDDMVYKFISESD LYKRTGIQKAIFNTIYQLMADKEQEPKKLAAASKILMMPDYMHYLLCGDARQEYCNATTG QLISPKTNTWDMELIKMLGYPERIFPDLVLPGSVAGQLTKEVQQMVGFNCKVVRPATHDT ASAVMSVPSDSDDCMYLSSGTWSLMGCELPNANCSKEAREANLTNEGGYDYRYRFLKNIM GLWMIQSVKKELEAGYPFPGKTGEEDLSFSGLCEMAAKEHIESIVDANDVCFLSPDSMIE AVQKACRDRGSQVPLTPGELARVIYRSLAHCYKRTIEEIERVTGKTFSSIHIVGGGSRAD YLNRLTAKETGRTVYAGPIEASAIGNIGAQMIADGVFKDLKAFRRCVFRSFGVKTYEPV >gi|333758476|gb|AFIH01000001.1| GENE 2200 2270586 - 2271434 537 282 aa, chain - ## HITS:1 COG:rhaD KEGG:ns NR:ns ## COG: rhaD COG0235 # Protein_GI_number: 16131742 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Escherichia coli K12 # 3 264 4 265 274 252 46.0 7e-67 MKVIDAGFTKSFIRMCSDGFTMGWHERNGGNLSYRVREEELASVKDDLDENAVWHDLGTT VPELAGEYFMVTGSGKYFRNVEIDPPANIGLVKLDDSGSKYRIEWGLKGNARPTSEFPTH VMNLEVCKKRDPEIRVVYHCHPTNVIALTFILPLDGKIFTRELWEMATECPVVFPEGIGV IEWMVCGGREIGIKTSEIMKKQDIAIWAHHGVFVCGRDFDESFGLMHTVEKSAEILIKVM SVTNKKRQTITPENFRALKAPFGVDIKEDFLYEKKSGLIGEY >gi|333758476|gb|AFIH01000001.1| GENE 2201 2271498 - 2272745 753 415 aa, chain - ## HITS:1 COG:BS_yulE KEGG:ns NR:ns ## COG: BS_yulE COG4806 # Protein_GI_number: 16080170 # Func_class: G Carbohydrate transport and metabolism # Function: L-rhamnose isomerase # Organism: Bacillus subtilis # 1 415 1 417 424 501 56.0 1e-141 MTAKERYEYAKEKYAQIAVDIDAAINKTSEIRVSMHCWQGDDVAGFDRKGTLSGGIQTTG NYPYKAKTPEQLMSDIEKVFSYVPGKHKLNLHASYAIFNEGEWVDRDRLEPRHFRKWIDF AKKNGIGLDFNPTMFAHPKAENGTLSSEDSEVRQFWIDHCIACIRISEYFAEETGIPCLM NIWIPDGLKDVPMDRRGPRARLKDSLDRILAAGYDKDKVYIAVESKVFGIGVESYTVGSH EFYMNYAAQNDLMCLIDTGHFHPTENVADKISSMLLFFDKMALHLSRPVRWDSDHVIIFN DDLREIAQEIVKNDAKKLLIATDYFDASINRIAAWTNGMRSLEKALLYANLQPNTELAKL QEARDFTSAMSLSEASKMMPFGDVWDYYCEQHGVLPEMQWYDDCKRYEKEVLSVR >gi|333758476|gb|AFIH01000001.1| GENE 2202 2273106 - 2273465 244 119 aa, chain - ## HITS:1 COG:no KEGG:Tthe_2726 NR:ns ## KEGG: Tthe_2726 # Name: not_defined # Def: transposase # Organism: T.thermosaccharolyticum # Pathway: not_defined # 11 106 391 487 570 128 61.0 6e-29 MNYFCVSFLNKKCPNDPKRFIRQNHCTSEGEIADKMIPSIDEDVATEEERYDGFYAVCTN LEDDVETIISMNQKRWQIEECFRIMQSEFQARPVYLSRKDRITTHLVLERITRLYLKEK >gi|333758476|gb|AFIH01000001.1| GENE 2203 2273559 - 2275145 1364 528 aa, chain - ## HITS:1 COG:CAC1344 KEGG:ns NR:ns ## COG: CAC1344 COG1070 # Protein_GI_number: 15894623 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Clostridium acetobutylicum # 8 525 11 529 534 603 54.0 1e-172 MTTNKDIIETGKAILGIELGSTRIKAVLLGENHQTIAIGGHGWENHYEKGIWTYSLEEIW SGLQDCYQNLAENIEKEYQTKLRKVAAIGFSGMMHGYMAFDQNGDLLTPFRTWRNNSANQ AAKELSSLFQYNIPERWSIAHLYQAILNGEEHVKELSYITTLSGYIHWKMTGKRILGVGD ASGMFPIDSSTKDYYSKMVASFDEKISGKYPWKLLDLMPKVMVAGEEAGRLTEEGARLLD PTGSLEAGCPVAPPEGDAGTGMVATNSVGVRTGNVSAGTSIFGMFVLEHNLKKFHPEIDM VTTPAGHTVAMVHANNCTSDIDAWVSLFEEFAQAVGSSVDKNTLYRTLFQKALEGDVNCG GLLSYAYISGEFITACEAGRPLFVRKPDSKMNLANFMRAQLYSALATLKIGMDILKHEED VRIDSIFGHGGYFKTPGVGQKFLAAAVEAPVSVMDSAGEGGPWGMAILTAFMLEREEGEE LQDFLSKKIYADSHVNTILPDSKEVEGFKSFMESFKAGLEIERLAGKL >gi|333758476|gb|AFIH01000001.1| GENE 2204 2275405 - 2276343 579 312 aa, chain - ## HITS:1 COG:PA1950 KEGG:ns NR:ns ## COG: PA1950 COG0524 # Protein_GI_number: 15597146 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Pseudomonas aeruginosa # 1 299 1 301 308 165 34.0 1e-40 MGKNIVVIGSMNQDIIMKISRMPDLGESMMVDECILAAGGKGSNQAVQAAKLGANVSMIG SVGKDTMGEFLLTEAEKFHVDVTHVKRSNAPTGMADAHVLPDGHLFCTVVKGANFELKIE DVTMAESLLKSADIVILQNEIPREVDYYVVDKAEEFGYKVIYNAAPAREMSRHYIAKCDI VVVNEVEAGFYCGTKIDSVEEAKVEALKMSMEMGNDWIITLGATGSVVASNKEVIFIPSY RVNAIESLGAGDSYIGALAYALLSGMSLFEGCRFATACSALTVMKCGAQIAMPTKIEVEE FRKSHSGSRSSN >gi|333758476|gb|AFIH01000001.1| GENE 2205 2276665 - 2277552 756 295 aa, chain - ## HITS:1 COG:PM1278 KEGG:ns NR:ns ## COG: PM1278 COG1830 # Protein_GI_number: 15603143 # Func_class: G Carbohydrate transport and metabolism # Function: DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes # Organism: Pasteurella multocida # 1 287 1 286 290 320 53.0 2e-87 MADLDELKVAKNYYVDVPFANQGDFQVKGCNGLDWGMKKHLSNIFNPKTGKTVMFAFDHG YFMGSTAGLERLDLKIPPLAPYVDVWMATRGALRTCIPANLKNGVALRVTSGSSMVQEDL SQEVVAVDIEDAIRMNADCMAVQTFIGADGQLSSLDNLSKVVNAGFRYSIPTMGVVAVGK QMERTDRFFKLATRIVAELGCQIVKTYYCDNFEEVVSACPVPIVVAGGKKLTEKDALEMT YKCIQGGAAGVDMGRNIFQSTHPVQMAHAVHEVVHNGLTGAEGYELFQTLVSESK >gi|333758476|gb|AFIH01000001.1| GENE 2206 2277612 - 2278769 1134 385 aa, chain - ## HITS:1 COG:STM4077 KEGG:ns NR:ns ## COG: STM4077 COG1879 # Protein_GI_number: 16767343 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Salmonella typhimurium LT2 # 52 385 18 340 340 211 38.0 1e-54 MKKLLSAVLTASMVMSLVGCAGGGNTSGGASTETTKAEAKTEAAAEAKPDQASGDIKSIE GKTVAFIPKLTGNSFFEAANNGAQKYAKEWGITVDYMGSANATVTDQLEVIQQAIDAGVD AIAISSVDATALDEKLKEAKDAGIVVCTWDSDVSPDARSMMVSQGTADVLGPMLVDMGVE ALKNRGVDPEGEVKYAWHYSQAAVADQNSWYVAGEKYIKEKYPKWVAVHDPYYSEQDSQK SVTIGEAVLDDNPDIDLIICNDSTALPGQCQAAQNKGLTMKDVTITGFCTPSGMTAYLDA GILERWGLWDCGVQGALGCYFAAYLAAGNTIKAGDTIDVPGIGAVKTVPNSELVPGTETA PENNGVVLLPERVVFTKENVKDYNF >gi|333758476|gb|AFIH01000001.1| GENE 2207 2278829 - 2279851 787 340 aa, chain - ## HITS:1 COG:STM4076 KEGG:ns NR:ns ## COG: STM4076 COG1172 # Protein_GI_number: 16767342 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Salmonella typhimurium LT2 # 11 340 10 328 333 182 37.0 1e-45 MKTIKGLLKHWEFILLLLFVLEIGIFGVANPAKFFRASSILASVTNYISVCIIALFVTFV MITGGIDIQASALIGLTSICIGVLWSDVGLNIWTAVLLAMLLSTLCGALSGYFIAYCGVQ PMVVTLGGSLLYSGLALLISGLSKTPAYQGISGFPAKAANGSFTGFRFLGKGMLFGTIPV PVAIYAVLILLCFILLHKTKYGRKVFLIGVNPEAAEYSGINSKLIVMSTYILTSIGASIA GVLLTANIDSAKYDLGSTFTLSIITAVVLGGTLSTGGKGSILGTVLASLMICIMRYGLPL CFGIKTQSLDLPIGIMLLIVVIGRELAKNKLVLQLFKRRK >gi|333758476|gb|AFIH01000001.1| GENE 2208 2279848 - 2280867 959 339 aa, chain - ## HITS:1 COG:YPO0411 KEGG:ns NR:ns ## COG: YPO0411 COG1172 # Protein_GI_number: 16120745 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Yersinia pestis # 4 329 2 325 351 171 34.0 2e-42 MKYLNELKKARWLSSFLFLIALFLVTGMVNPDFLTYSNIVTSFNGSVVFTLLAIGIAFVI MTGEIDVSIGAVMGLTATIAGQIAKRNGSILEMLVFAVLIGMLVGAMNGIGVSFFHVPSL IFTLGINGALRGLIYVVSGGKTTENFAGAFTKIGNQVLFAEVTIYLAIIVVIIAVIHLLL TKTKKGKYFIAVGDNPNGATLVGISVMKTKMLAYIICGIFAGVAGVVFASKYGQVNIVAG TGYEMSAIAACVLGGISLSGGLGNILGAAFGAVIMSSVSRMLVFIHLPSNFNNTLTGVML LIIVVADALVQRHAVESARRKRLLSRTAAMDAKVGGTKK >gi|333758476|gb|AFIH01000001.1| GENE 2209 2280864 - 2282405 202 513 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 282 496 24 226 305 82 25 8e-14 MDHEKDQAVPGLSNSLLSVKGICKTFGSNAVLKGIDLDLRSGEVIALIGGNGAGKSTLMK IIMGIYQADSGEIYVAGEKTELVNPSVALSKGIYMVPQEPMLFPNMTVEENVLMGFSESS SELKKRLSEKVEELNWNVNLQRKASTLSIAEQQLVEILRGMMREARILILDEPTSALTFD EVQSLFKVIRNFGKKGIGIIYITHRLNEVFEITTHVSIMKDGMITVNGPVSDFTKEDLVN GLLPPNLEKKTEERQEEEAFERGKLDPVLVVDDLSGYGFSHINFSLYPGEILGIAGLVGA GRTELVSTIYGRDQVLSGTVKLSGKDITGLSTRKVLEAGINYVPEDRHYQGLFKISSISA NTSSALLNGPKLGRFFLNRKKEDEIAKSYADDFRTKIVGLNDEIGSLSGGNQQKVIIARS LSTSPKVVILDEPTRGIDAAARGDVYNIIHRLKRSGVAVLLVSSDMEEIEELADRAIIMF QGRITGTFSREELTQDRLTSASFGFKGEKEVSE >gi|333758476|gb|AFIH01000001.1| GENE 2210 2282722 - 2283636 733 304 aa, chain + ## HITS:1 COG:SMb21021 KEGG:ns NR:ns ## COG: SMb21021 COG2390 # Protein_GI_number: 16264342 # Func_class: K Transcription # Function: Transcriptional regulator, contains sigma factor-related N-terminal domain # Organism: Sinorhizobium meliloti # 5 304 12 311 315 189 33.0 8e-48 MEIYDYEESLMAKTAWYYYSENMTQQNISEVLGISRMRVIKLLEKAKQSGIIQFRIRSNI DKRMQLEQNLIEKFDLKDCFIVPDSVQTLAVNENVARAAAMYISNRINADTFINIGYGDT TGRILNHLAINTEYTPSFVSLTGGVSYYLPNASSSTFNSRLYLIPSPLITSTKEMASAIK AEKSVKEIEQLIPSSHLSVVGIGAMNPKATILQSGILSQNEFLILENNGAVGDVLSHFID KNGDVVNSSLEGRTISTSLDVVKQLENVIGVAAGQEKVNAIRSALNGRYLDVLITDEGTA NSLI >gi|333758476|gb|AFIH01000001.1| GENE 2211 2283665 - 2285239 1100 524 aa, chain + ## HITS:1 COG:PM1272 KEGG:ns NR:ns ## COG: PM1272 COG1070 # Protein_GI_number: 15603137 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Pasteurella multocida # 1 523 1 522 522 542 50.0 1e-154 MNQQYLLAIDAGTGSIRAVLFDTSGRQIDCVQEEWEHHEDPRWPGSMDFDWTFNWNLASS CIKRLIEKTKIDNKDIAGISTTCMREGIVLYNKEGKEIWACANVDGRSVDEVAELIRQNP ALEKVLYSESGQTYALGALPRLLWIKNKLPHIYEETAVLGMFNDWLIHKLTGVLAVEPSN GSTTGIFDLKKRSWNPEIAKQCGLRDDIFPPVQECGTKAGYVTESAAAETGLAAGTPVIV GGGDCQLGCIGVGAVNPGDATIFGGSFWQYEYNTESGQTDPECRVRVNCHAVPNLWQFEA LAFKPGLVMRWYRDAFCQQEKELAKQSGDDHDPYNLMNKEAEKIPAGCYGMMCTFSDVMN FIQWKHAAPSFLNFELDAEKFNRYTFYRAILENAALVTKGHMELVQASTGKAPSHVVFAG GASKCPLWCQILADVLNLEVRVPVVKEATALGAAILAGYGVGIYKDIASAAKECVKWDKV YTPNAENHAVYQKMYPVWREVYKAQLELCDRKLTKNMWIAPGIS >gi|333758476|gb|AFIH01000001.1| GENE 2212 2285272 - 2285625 613 117 aa, chain + ## HITS:1 COG:STM4071 KEGG:ns NR:ns ## COG: STM4071 COG1917 # Protein_GI_number: 16767337 # Func_class: S Function unknown # Function: Uncharacterized conserved protein, contains double-stranded beta-helix domain # Organism: Salmonella typhimurium LT2 # 31 113 2 84 88 63 37.0 1e-10 MYVVDEKDYEYRNENLNGPKYLMKGPRMNFALVQFQPGKDFKAHYHNVMEENFYILEGKI DVIVDGVVNHLSPGQMIHIEPGEVHYVVNNYDEPVKMISTLAPYQEVDKVEVDNYTY >gi|333758476|gb|AFIH01000001.1| GENE 2213 2285778 - 2287319 1192 513 aa, chain - ## HITS:1 COG:FN0830 KEGG:ns NR:ns ## COG: FN0830 COG2865 # Protein_GI_number: 19704165 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen # Organism: Fusobacterium nucleatum # 1 511 1 514 522 743 78.0 0 MQLLDIKRMAHNILENQYIESSFIEYKKSANFKDKILKTACAFANNYMNNEIGLLFVGIE EVDDKATGEKAIPKRPIEGIKEAKLEGIENEIKSLLSNIYPKINYHIITDKIDDEYYIVV AVESGSNGPFQTSERAERDKDIKLKAGRYIRVGRDSRLPNPIEEFELLKKFANFSFSSNL NDRATIDDLSYEYMKEYLLQTGAKKDIREMSKLDMAKSMGLVSESEYGGYRAKNFAVLMF SETPNKFIPNAHVEIIREIDGTDKMESKRFDGPVWIQAKQVSKYFEDNIMASYTIREADK IEHKIIYNYPLTAFEELATNAILHKEYDTPEYVGIYIYKDRISFVNHNRPLPPVTIEALN KDRSFDRRQYLNKELKDMFFSLNLIESYGSGIRRAKDALSENGSPELKFYPDNEEDNYTN AVIGINAEFLEEFNGSTTQETTQETTQEIKIEKSVPNRIIELMMMEPNITAKQIAEHLNV SFDGVRYHIKKLRADGKIKREGSTKSGKWIVMK >gi|333758476|gb|AFIH01000001.1| GENE 2214 2287529 - 2287921 394 130 aa, chain - ## HITS:1 COG:ECs2225 KEGG:ns NR:ns ## COG: ECs2225 COG3328 # Protein_GI_number: 15831479 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 # 42 130 34 118 140 72 41.0 3e-13 MAKRERKPVHHVQMTDGKRAIIQQLLQEYDIQDALKDLLGGTIKEMMEAEMNHHLGYEKS EHTDSTDEVRDYRNNYKTKQVNSSFGSMDIEVPQDRLSEFEPQVVKKRQKDISDIDRKII SMYAKGLSTK >gi|333758476|gb|AFIH01000001.1| GENE 2215 2288071 - 2289096 1133 341 aa, chain - ## HITS:1 COG:BH3732 KEGG:ns NR:ns ## COG: BH3732 COG1879 # Protein_GI_number: 15616294 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Bacillus halodurans # 1 310 1 297 311 197 40.0 2e-50 MKKRFMATVAMLSVLALVGCSTGAKTETTKAAETKVEEKATEAAASEDKKDGVMIGLSMN TQTNPFFVSVQQGVKDAAAKYGIEIVATDAQDDPAIQAKDIENLISMKPAAIIVDTCDSD AIVPAIESCNEAGIPVFTMDRKANGGEVVSHIGYDAIKSGAMAADYLAKALSEKGKVVEL QGIMGSNVAQDRHQGFTDEIKKYPNIEVVQSEVANFDRATAMSVMENILSANPEIDGLYA ANDEMALGAVEAIEAAGRLDKITIIGCDCIDDTIDAMKEGKIEASISEPPYGLGVSILEA AHTYLDGGKVPKQVVLGNQVLEAKDAANYNSKRDVEIVSQE >gi|333758476|gb|AFIH01000001.1| GENE 2216 2289166 - 2290122 761 318 aa, chain - ## HITS:1 COG:BH3731 KEGG:ns NR:ns ## COG: BH3731 COG1172 # Protein_GI_number: 15616293 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Bacillus halodurans # 22 311 20 311 314 228 47.0 9e-60 MKKVNKGVLVAQVNIYRSVLILLLICIVASILSKNFLSLSNLFNVIRQVAVGGLVAAGMT FVILTGGIDLSVGSIVGLTGALCAGILKSTDNMMLAILVAITVGVLCGCINGFFVAYCEI PAFIATLGMMTLLRGCVLVYTQGSPIAIKNAGYKFIGKGNLLGIPLPILFVVFFFLLGHY ILTKTAYGRAVYALGGSREAARLSGIRTKLVEWMVYVINGFMCAMAGIVLTSRLASAQST GGEGIEMDAIAAVILGGTSLSGGSGFILPTVVGAIIMGIIDNLLTLMKIDPHATNIVKGA VILLAVLVDKKVNELSDR >gi|333758476|gb|AFIH01000001.1| GENE 2217 2290119 - 2291612 187 497 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 237 482 11 249 329 76 25 4e-12 MDDCVLRIESVTKKFPGVIALKDAHLQIKRGEVHAVCGENGAGKSTLMKIIAGAQGYTSG HIYLDGEEVFFHSTKEAEKHGIAMIYQEFNMVPELSVAENMYLGRLPMKGGGRVDFGKLY KDAEEIINRLKLHINIRTKVKHLSVAEAQMTEIAKCLTIGAKIIIMDEPTAALTDEEIKV LFEIIEDLKKKGISILYISHRMDEIFQIADRLTVFRDGSYIETKEIKDTNYAEVVSLMVG RSLESLYPERDYQGSEVVFEAKDIHGKGVNGVSIELRKGEILGIAGLLGSGTIELSKMIY GAIPMKSGEILVHGKRIDNSSPNKAIQAGIGFVSDDRKNEGLVLNRSIKENIVLSSLKKF SSGFRINKRKEQNAVQNEVERLNIKLSSPMQLAGRLSGGNQQKVVFAKVLEADTDILILD EPTRGVDVGAKAEIYNIMDQMTKEGKSIILISTDLPEVIGMSDRVVIMREGYRVLELSKE ELSQEKILAYESGGIES >gi|333758476|gb|AFIH01000001.1| GENE 2218 2291627 - 2292025 377 132 aa, chain - ## HITS:1 COG:BH3729 KEGG:ns NR:ns ## COG: BH3729 COG1869 # Protein_GI_number: 15616291 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type ribose transport system, auxiliary component # Organism: Bacillus halodurans # 1 132 1 129 129 107 43.0 7e-24 MIKQGIFHPQLLRVMGELRHRDTLVIGDAGLPIPNGVERIDLGWKAGSPGYLEVLEEILK YLVVEQATFAEEAKTVSPEFHKKALSLLPENLPLRYIPHTELKKESESAKAIILTGEFTG YTNVILTCGCAY >gi|333758476|gb|AFIH01000001.1| GENE 2219 2292027 - 2292956 891 309 aa, chain - ## HITS:1 COG:HI0505 KEGG:ns NR:ns ## COG: HI0505 COG0524 # Protein_GI_number: 16272449 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Haemophilus influenzae # 6 305 7 305 306 227 45.0 3e-59 MGKVLVFGSFVVDLMSRTPHLPVPGETVKGSVFKMGPGGKGFNQGVAAHKAGADLVMVTK LGKDTFGNVALETMKNLKMNADYIFQTDEAETGAALIMVDENTSQNEIVVVLGSCNQITD QEVDSLSPVLEESEYLLTQLETNVSAVEGIVALAEKKGVKVILNPAPVQKISDMVLSKID IITPNEVEAEILTGIPVTDEENAKKAADWFMDKGVKSVIITLGGRGVYVASEEQRKLIPA FKVNAIDTTGAGDAFNGGLVTALAEGKDLLEASRFANALAALSVQKIGTTPSMPIRSEIE AFLENNKEA >gi|333758476|gb|AFIH01000001.1| GENE 2220 2293081 - 2294082 639 333 aa, chain - ## HITS:1 COG:RSc1014 KEGG:ns NR:ns ## COG: RSc1014 COG1609 # Protein_GI_number: 17545733 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Ralstonia solanacearum # 2 324 12 336 347 189 36.0 5e-48 MGVSSTTVSRVINCSGYVKEETKKKILQVIQETGYVPNEVARSLSSRESSGIAVLVPDIT NEFFSALIRGIGSVAEEEGYRLILCDTAEDMNKEHNALSEVERQYLSGIIIAPVSEQDAE TYHRLAELEKKNISVVLADREVYGGELDGVFVDNVKGAYEGVHALIREGHRKIAIIAGPE TSLPGRERLIGYKEALRDAGLEVKEEYIVFGDFQIDKAYERTRELLALEEAPTAIFTSNN KTTLGALKYFTENHIKIGRDISILGFDQIDALKFIAYPLSTVERDAEFQGKETMRALISK LKNKGNTGIKKKILVPHKVILRGSEKCKKLHEI >gi|333758476|gb|AFIH01000001.1| GENE 2221 2294284 - 2294898 686 204 aa, chain - ## HITS:1 COG:FN1841 KEGG:ns NR:ns ## COG: FN1841 COG2376 # Protein_GI_number: 19705146 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Fusobacterium nucleatum # 11 199 6 196 202 89 31.0 5e-18 MIAISEIKKGISAIAKEMTENRDYLVELDQRNGDGDLGISMSEGFNALVEVLNKTEETDL GKVFRDLSKTFNESAPSSLGTILSFGLMGIAKELKGKTEVSRQELSVALEKGLDNILDKT GSKVGEKTIIDSLSPGIESLLSSGSEEDKVAFQNAYEASKAGAEKTKEMMAVHGRAAYYG EKSLGLVDGGAVVGTLIFKGMATE >gi|333758476|gb|AFIH01000001.1| GENE 2222 2294933 - 2295940 1074 335 aa, chain - ## HITS:1 COG:mll7280 KEGG:ns NR:ns ## COG: mll7280 COG2376 # Protein_GI_number: 13476064 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Mesorhizobium loti # 2 330 6 334 337 311 48.0 1e-84 MKKIMNDPKDFVKEEVEGIIAAYGDKISLLNDDFRMVIRKDAPVKGKVGIVTGGGSGHLP LFLGYVGEGMLDGCAVGNVFASPASSKMADLIRACDAGAGVLCLFGNYGGDLLNFKMACE DVEFDDIKTEILLGADDVASSPVETKEKRRGVAGIVYAYKIAGAAADKMMSLDEVVRVTK KALENMYTMGIALSPCIVPEVGKPTFHIEEDELEFGMGIHGEKGIEVKKFTTADEIATNM LDKILEEADLKSGDEVSVMINGLGATPTEEQFIIFRKVSQILKDKGVQIVMPHIGEYATS MEMAGLSLTVLKLDEELKDLLRYPASTPFYTNSNK >gi|333758476|gb|AFIH01000001.1| GENE 2223 2295969 - 2296694 197 241 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 14 230 135 353 398 80 30 3e-13 MEKETILKVSDLSVNYGYVAAVRNVHLQVCKNEIVTLIGSNGAGKTTTLMAISNLVEKTS GQILFDNEDIGKLPPDQVVRKGIAHVPEGRKIFPRLSVYENLLVGSLGNPKLKKTEIEEQ IEYIFSLFPRLKERRKQAGGSLSGGEQQMLAIGRGLMMKPELIMLDEPSMGLAPIIVEDI FELILKIRDTGKTILLIEQNASMALSIADRAYVLETGKITMEGKGSDLLNDENVKKVYLG A >gi|333758476|gb|AFIH01000001.1| GENE 2224 2296696 - 2297475 249 259 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 1 239 1 223 305 100 27 3e-19 METILEAKGVCKFFGGLKAVNQVDMQVAKGDIFGIIGPNGAGKTTFFNSCSGIYSPTKGK FYLNGEDISLMSSDQIARKGMARTFQNIQLFKFMTVRENVKIGFHTRTKSGIMDAIFHSK RFKEDEKFVEEQVAQVLEKVGLSDYADTMAGNLSYGIQRKVEIARALALNPEILLLDEPA AGMNPNETESLREFIIALNKSGYTIVVIEHDMKFIMNSCNRILVLNFGEKICEGGPKEVQ ENKMVQEAYFGHGKLMGDM >gi|333758476|gb|AFIH01000001.1| GENE 2225 2297506 - 2298498 835 330 aa, chain - ## HITS:1 COG:YPO3806 KEGG:ns NR:ns ## COG: YPO3806 COG4177 # Protein_GI_number: 16123940 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport system, permease component # Organism: Yersinia pestis # 51 314 119 405 428 174 39.0 2e-43 MSKSEVPVLERWDGFYRKYRIFLYILLGIVLLILPVLFPKNYIMGVLCRILMYSTLAGAL NSINGYSGQTCLGIAGFFCIGAYTEAVLATKLHLSFWLLLPVSGIVTALIGLLIALPTLK MRGIYLSIVTLGFSEIVRLIALNWTGVTGGALGIKGIPAPELFGYSIKNAKSYYYIFLVI AALFLFVTNRVVHSRVGRAWMSIREDQLASRSLGVETPKYKAMNFMYGAFWAGVVGATYA PYVKFIDSTYFTLDEGWNVLSMVIIGGQGTLLGPILGAGIVNFITEILRPIGEWRLVAFA ILIIVMLWLRPQGLAGASDSILSGKKISRS >gi|333758476|gb|AFIH01000001.1| GENE 2226 2298495 - 2299370 854 291 aa, chain - ## HITS:1 COG:AGc4402 KEGG:ns NR:ns ## COG: AGc4402 COG0559 # Protein_GI_number: 15889697 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid ABC-type transport system, permease components # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 282 1 290 300 163 35.0 5e-40 MEYFLNQLINGLCQGAIYALLAIGYSVIVGVVGMVTFTYGEVIMIGAYTSMYMFQYFGNN LLMGIVASFLTTWIMGIAIYHICYERFSNAPRHIPLLCTIGFSILVKNLAQIFFGPNQQP ILNVINNTIYTIGPVQVQKIQLIILFVVVVLAVILSLVFNKTTWGISLRAVSQNKTAASM VGINVKRMSMIGNCIGCGLGGVGGTLLGLYYQMAIPTMGGSYGMKAFSASVLGGLTDIPF SAVGGMCLGIIENLGITFSSASFRDIFAFGFLILVLLIRPEGFKSKKGERV >gi|333758476|gb|AFIH01000001.1| GENE 2227 2299457 - 2300677 1346 406 aa, chain - ## HITS:1 COG:FN1432 KEGG:ns NR:ns ## COG: FN1432 COG0683 # Protein_GI_number: 19704764 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport systems, periplasmic component # Organism: Fusobacterium nucleatum # 6 394 1 375 383 141 28.0 2e-33 MLLKKMKASLAVALVASMSLLTACGGGAEKKADTTEKSGETQAAKEGNAAEGGTIKLGVL APLTGTNAEYGKGFQIAMQMAVDKINADGGVKGKKFELSVKDSKGDQKESSDLARQFADD DEIMAILGDFTSGCCMANASIVDEAGIVQLSPTASNPDYAPMSKYCFSIMGLQSAEAPFA AKYLLQKYAGAKNVGVIYINSDWGTSAFSNFEKAAKEIGLNIAASVNYVQDEKDFSSLIT KLKSANPDHVIILDQGAVPQIINQIRTSGWDVPLAALGPGTSEQLISQTGKNSEGLLITS PFFFDPENKELTAWKDEFVSKAGFQPTIHPACAYDTVYLIKTAIEAIDGDITREAIRDKL AEVDYTGVTGPIKFTENGDINRQYMICGIENGQYVIKEGFDYSKEN >gi|333758476|gb|AFIH01000001.1| GENE 2228 2300838 - 2301860 748 340 aa, chain - ## HITS:1 COG:no KEGG:SOR_1721 NR:ns ## KEGG: SOR_1721 # Name: not_defined # Def: uroporphyrinogen decarboxylase family protein # Organism: S.oralis # Pathway: not_defined # 1 330 1 331 334 269 38.0 2e-70 METKKERVFKALRNEEVVDVPVGFWHHYLEDEHVDALKTPAYHTQNVEGAKKFKEEFDPD FVKVMTDGYFYLPIELDISSVDKLPNFTLVPIEHPWFQKQIELAKEYREIYGKDIAIFHN LFAPLWHFEEAIRKAYKVDAEESHEIILGYLKENPEAVASCLDKIADNLSLLLKEVVKEG VTDGIYLSAQDMHRYIPDALYRLYVTPSEKKVLENAKAFSPYNLLHICGWRGNTNFLTIY QDYPAIAFNWAVNTECLSLREGKKFFHDKCVIGGFLNTEDSILFTGNKGEIQNYTQKLLK DVGRKGVIIGADCTLPRSIDYEKIQYIREACKGDFQKIVG >gi|333758476|gb|AFIH01000001.1| GENE 2229 2301946 - 2302596 211 216 aa, chain - ## HITS:1 COG:BS_ydhC KEGG:ns NR:ns ## COG: BS_ydhC COG1802 # Protein_GI_number: 16077637 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus subtilis # 11 192 17 199 224 72 29.0 4e-13 MEEKNLKSLIYQGVYRDVANGILKPNEIISENKIAEKYGVSKSPVRDAMVELCKDEILKS IPRMGYQVIPVNLKDILNIIDFRVDIEISGLRRYGNHFTDEQIAVLEKITERGMENDATA SEGWFKNYEFHTALYSFYENEFALKYLSKLIRQGATFISQYFIAARGKNRELNGRVHMEI VEEIRRGDIEKACKILQSDIESIKQDIALLYGWTQQ >gi|333758476|gb|AFIH01000001.1| GENE 2230 2302817 - 2304058 1383 413 aa, chain - ## HITS:1 COG:STM3356 KEGG:ns NR:ns ## COG: STM3356 COG0471 # Protein_GI_number: 16766651 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Salmonella typhimurium LT2 # 6 412 5 418 422 213 35.0 7e-55 MTWQATFTCVVFLITLILLVWQKVPMVILGAAIPAVLAIAGVIDPKEAYSDFGNTTVVFF MGLVVVGEAFFKTGLAEFLGGKIIGLLGKTEKGLILGTGIVAGGLSSFLNDTGSTACLMP IVGSMADKANVKKSKLLMALAYFASLGGTVTLVGTTPHIVANGILKDNGLREFGFFEYTK IGLPLLIIGILYMCFFGVKLLPEKDVESAAVNRVSEKNPGKMLLVAVIFIGVLVSMATNI IPMHIAGVIGAILVVLTGCITAEEAVKAFPTSTVFIVGGIFPLSKALVSTKAAEFMVQAV QPVLSHFPPIILLGAITFLMIFVTQFLMNSSATVLVLPIAILLSQAAGINPLASAMAVSV CASGAFATPFGTAPNLLVWEAGGYSIKDYFRCGFPMCIIFGLVVTILCGIFYL >gi|333758476|gb|AFIH01000001.1| GENE 2231 2304055 - 2305086 1011 343 aa, chain - ## HITS:1 COG:no KEGG:BLJ_1395 NR:ns ## KEGG: BLJ_1395 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_longum_JDM301 # Pathway: Porphyrin and chlorophyll metabolism [PATH:bll00860]; Metabolic pathways [PATH:bll01100]; Biosynthesis of secondary metabolites [PATH:bll01110] # 1 335 1 341 347 144 29.0 5e-33 MLSKKERVLAVLEREAVDRPPISAWRHFTESEHDGVDPFVEVMLNWQEKWDFDYMKLQPR ASYYEEAFGAEFDYTKYAGVLPTCIKAPIEKESDFDALTEVPGSHNIFQEQAEVIRKIRE KVGDEIPIFQTIMCPTSILQKICNINPIGRYREASREDLLVQTMKNHPEKVHHALKVITK TLQNYAEELKKAGTFGVFYGATGLSRDSYLHYSEWEEFVKPYDFEVFEAMRPMKLMVHAC GIYVHPEYFAHYPIDILHWPESAIGNPSLDSSKEWLDPKITPMGGCDERLFGQHKEIEIN LRTRDAVKRMKDIPFFLAPDCSLALNTYDEELKAFIEAGKETV >gi|333758476|gb|AFIH01000001.1| GENE 2232 2305256 - 2307796 2571 846 aa, chain - ## HITS:1 COG:CAC0456 KEGG:ns NR:ns ## COG: CAC0456 COG0466 # Protein_GI_number: 15893747 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATP-dependent Lon protease, bacterial type # Organism: Clostridium acetobutylicum # 82 832 9 758 786 627 46.0 1e-179 MNKLVEALKKWIEKREEGVEKKGRISAISREIPKTKGEACSEKKSGEEDKNAEQAKSNEK TGEALQAFSEEEKDRGGQAMRVVPVYNMMILPNSYIYFQIDNFRTLAGKTVEEGDKLILA VLHKNEVDTRALHKEEVHPIGVEGTIKEISKDGYAVVETGNRVRIDALSQVEGEPLLLQT TPLYDVEDVDREEAAKKLQEIKEELKGLVERFHAGKVMAGMIDHHQAIQEVACVLSPWLS LNNEERYRVLQEDRLSVRTKMLEQIIYEYIEVTKVTTDARTQQQEDYQKLYKEQALQKQI DYLQKELDEMHPEKVSDLRKFELRIAEAGMNETAKKEAGKILNRLKNEGTNGQEAGMLYD YLDFVTGLSWKKEEQKEIDLDEAEKILSEDHFGLKKVKERMIQQIAVMNLKKQQSGSILL FVGAPGTGKTSIGKSIAKALGRKYVRVSLGGVRDEADIRGHRRTYLGAMPGRIMDGIQKA GVSNPVMVLDEVDKLSASYNGDPAAALLEVLDPEQNNTFTDHYMNVPYDLSDVLFICTAN SLDTIPAPLLNRMEVIQYQGYTPKEKFEIAKRHLLRKSLKGVGLQQENVEITDEALENII SDYTREAGVRGLKKRLDTLCRIAAVHLVKGKGEKISVGKGDLREYLDMNPLHRREVKEEG KPGIVTGLAWTAVGGEILYIESMFTKGEGKLNITGQLGDVMKESAQIAISLVKSMFPDKA KLFKENDLHIHVPDGATPKDGPSAGITLTIALASLVTGQAVSPRIAMTGEVSLEGLVNPI GGLPEKLMAAERAGVKTVLIPKANEDDLRDVPDEVKEKLQILPIKTVEEGLELCEIKYTK SGLEVV >gi|333758476|gb|AFIH01000001.1| GENE 2233 2308184 - 2308264 66 26 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKVSELSKLLKKNGCYLVEHGKEHDE >gi|333758476|gb|AFIH01000001.1| GENE 2234 2308395 - 2308703 123 102 aa, chain + ## HITS:1 COG:no KEGG:Dred_1551 NR:ns ## KEGG: Dred_1551 # Name: not_defined # Def: hypothetical protein # Organism: D.reducens # Pathway: not_defined # 1 95 1 95 129 105 55.0 4e-22 MKYVYPAVFTPEDNGQFSVNFPDLESCYTCGDDLGDALYMAEDVLAMTLVSYEDKGLSIP APSEKLPLEAGEFQNFIACDTEIYRKQNLNKAVKKHSLFRNG >gi|333758476|gb|AFIH01000001.1| GENE 2235 2308853 - 2309047 226 64 aa, chain + ## HITS:1 COG:no KEGG:EUBREC_1094 NR:ns ## KEGG: EUBREC_1094 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 1 62 1 63 63 72 68.0 6e-12 MPKKAKEMERIILKDGWYLVSQEGSHRQYKHPIKKGKVTIPFHTKELTKFTECSIYKQAG IERS >gi|333758476|gb|AFIH01000001.1| GENE 2236 2309050 - 2309472 319 140 aa, chain + ## HITS:1 COG:SP1786 KEGG:ns NR:ns ## COG: SP1786 COG1598 # Protein_GI_number: 15901615 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pneumoniae TIGR4 # 1 137 1 146 150 69 32.0 2e-12 MLSIYPAIFYKEDDGRYSVLFPDFDVATCGNDLNDAMNMAVECLALQLVGLKRDGDPFPV SSPVDTVDPVAYAEELGAGKPSDYFVNLISVDADEYAKLHFNKSVRKNLTIPVWLNEKAL AQGINFSQVLQEALLERLGG >gi|333758476|gb|AFIH01000001.1| GENE 2237 2309486 - 2309746 247 86 aa, chain + ## HITS:1 COG:no KEGG:Selsp_0513 NR:ns ## KEGG: Selsp_0513 # Name: not_defined # Def: hypothetical protein # Organism: S.sputigena # Pathway: not_defined # 1 86 1 86 86 149 77.0 5e-35 MPTISMFYGIIIRMYNNGEHNPPHFHASYQGYYATFTLDGDLIEGEIPKKQIKLISAWAE IHKDELLANWDLAISEQPLYKIDPLK >gi|333758476|gb|AFIH01000001.1| GENE 2238 2309762 - 2309998 201 78 aa, chain + ## HITS:1 COG:no KEGG:Selsp_0514 NR:ns ## KEGG: Selsp_0514 # Name: not_defined # Def: Protein of unknown function DUF2442 # Organism: S.sputigena # Pathway: not_defined # 1 78 1 78 87 70 44.0 2e-11 MHIPKWIVKDVQVAKNHKLLLTFIDGKKGIFDFLPQLHKPIYEKLKNEDFFSTAHVEDGT VVWDDETDIAPEYLYENS >gi|333758476|gb|AFIH01000001.1| GENE 2239 2310008 - 2310127 116 39 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNKLPKGVDQLPSGKYRLRKMVNGQMLTPYLRSSPHKEK >gi|333758476|gb|AFIH01000001.1| GENE 2240 2310595 - 2311593 1178 332 aa, chain - ## HITS:1 COG:no KEGG:Lebu_1608 NR:ns ## KEGG: Lebu_1608 # Name: not_defined # Def: membrane associated protein # Organism: L.buccalis # Pathway: not_defined # 76 329 56 315 321 176 40.0 1e-42 MSILGLTIALAACGNSGGKAKESTVSEATEKAEVKESESAESSEKSEKSEETVKETENSA GAGESDAPISKAKLKLKYSNLVDAETRERVEAALKNAGLKEDKIKSFFAAVDEYNNAVGK ENLVQEMTTIDAGFPSLDSDKLVDAWLDKGGYVGRNCRITAFSLMGDFITVGNPTPGETT MLFSDFDAISAKQIFTGEAKKNYDTVFSYIDVENTQDTAILSSAIVQSWKEKEISFHNDK MHMISVFMTMDDGLNKVQEFIGHVGVLVQDGDKYLFIEKLAFELPYQVDEFSSLQEVNDY LMGYYDKDADGLTAKPVIFKDGEMMKEYRVLD >gi|333758476|gb|AFIH01000001.1| GENE 2241 2311835 - 2313316 1524 493 aa, chain - ## HITS:1 COG:FN0454 KEGG:ns NR:ns ## COG: FN0454 COG1012 # Protein_GI_number: 19703789 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Fusobacterium nucleatum # 4 490 5 491 491 617 60.0 1e-176 MEKLDQFYGLFIDGEFCESSDKARFKTYSPATGEVLAEVAEATREDVDRAVSCAWKAFAS WKKLDKVSRSKILLDIADIIDANKEHLARVESMDNGKPVRETLAVDVPLAADHFRYFAGA IRTEEDSATFFDENTLSLIIHEPIGVVGQIVPWNFPFLMAAWKLAPVLASGCCTVLKTSS STPLSVLELMKLIKDIVPKGVINVISGSGSKSGQYMLEHKGFRKLAFTGSTEVGYSVAKA AADRLIPATLELGGKSANIVFPDCDFDMAIDGLQLGILFNQGQVCCAGSRVFVHEDIYDK FVEAAVEQFNKVKVGNPLEADTQMGAQINAKQVQKIQSCVDIAVQDGAKIACGGRVFDEG ELSKGAFYRPTLLINVDNSMRAAREEIFGPVAVVIKFKTEEEVIAMANDSEYGLGGAVWT RDINRAMRVARGIETGRIWINTYNAIPAGAPFGGVKTSGVGRETHKVILEHYTQMKNIYI NLKEEPSGFYPKK >gi|333758476|gb|AFIH01000001.1| GENE 2242 2313651 - 2315624 1521 657 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_1173 NR:ns ## KEGG: EUBREC_1173 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 1 232 1 233 802 137 35.0 2e-30 MIIKSCHIAQFGKWKEKDFSFSDALNPYLWENGEGKTTLMHFFHIMFYGLSGDRKQDILE NERKHFMPFQGGNFGGNIHFQEKGKNYILERSFGLRKAEDSFRLLEEGGKESKDYSENIG EEIFSLDSEAFQKVCMISHEDLSLRFNSSIHAKLGNVSDDREDMQKFQKVQNTLKDAINA LSPNRRTGAIFKKKMEEESLSASLYRKKEEEEAVLSLEEEVLSLEEQWKEKTKEEERLEE EVQKGIVEKEALGKKVEYQKLQEELEKAHYRYENAKKWYYQNRLESLSEEEQDRLWKEEL QELKSKINALKKEAEKPKEEASLEKGTEERERRNPLIYILSVTALVFLLLFFFKISGGNL PVPGSLSLLIAILLFAIAFAIYYGERERRNAYLGRRLAEEEKRGKEESLRLLSLEELLSH YHKVEEMLSLEAEEKERQEALSAFLAQGENKKTVENSAADFVSLEEAQSRLERHRKEQEL LKDNIREKREEREDRVEILKALSEQERTLQAVREERQAMEERIHILQQTKDYLEKAKDAF ASEYRGPILSAFTKYFQELTKTKMQFAITNDLEIEFIEGGMRRSLAYLSEGLQDLCRFAM KLAIFDAMFPDGKAVLFLDDPYSHFDDEKGERGLALLDGLSEKRQILYFTCSASRMP >gi|333758476|gb|AFIH01000001.1| GENE 2243 2315621 - 2316853 1108 410 aa, chain - ## HITS:1 COG:SA1662 KEGG:ns NR:ns ## COG: SA1662 COG0420 # Protein_GI_number: 15927418 # Func_class: L Replication, recombination and repair # Function: DNA repair exonuclease # Organism: Staphylococcus aureus N315 # 1 379 1 340 398 89 26.0 1e-17 MVRLIHTADLHLDTTFSSRFSKEEAEERRQGLLLAWNKLLDFGAEKRVQAVLIAGDLFDS PVVSRSTMDIFLSSIRKNPEISFFYLRGNHDTKNTFRFQENLPKNLFLFSHEGKKYRLNE KLVLAGQEFYGRGEQEEENYFFDSEEEEEQALEEGMNCFPEKEEPVQGIWNFKEEDCNLL MLHGMLRESSVSKETSEEKASSERTPETVQTEDGISLRALSKYPIHYLALGHIHKREEGR FGALRYLYPGCLQGRGFDEEGEKGFYYLEINEQNKEIRTEFVPLKDGEFRIIEVLLSEED GSLEALEKITERIREEKAGEKDSLRIILKGEKSPEGERNLRYLEKQLSENHAYVEIKEEC RLKLHKEDFMHEKSLKGEFLRMVSDSESLSEEEKEKIILLGIGLLQGEEL >gi|333758476|gb|AFIH01000001.1| GENE 2244 2316891 - 2318219 1011 442 aa, chain - ## HITS:1 COG:CAC1651 KEGG:ns NR:ns ## COG: CAC1651 COG1160 # Protein_GI_number: 15894928 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Clostridium acetobutylicum # 3 439 4 395 411 306 40.0 5e-83 MSLQDTPQSERIHIGFFGRRNAGKSSLINAIAGQPVSLVSETPGTTTDPVRKAMEILPLG PVLLIDTPGIDDEGSLGEMRVARSKEVIRETDIALLVLSAKVFLEENAAFLQRGLERGEP PVFRLLKALKREQFLLPERERALLADFREEDIPVMLIFSQVDRLSEAEREALQIVIKILR EEKTKYGISEVRSSSGLNLEGIEEIKSALGAFLPKQKERRLFSDLVEAGDYIVLVSPIDE SAPKGRIILPQQMAIRDLLDYHAIPVVAQPEELKTIMESLEGKVKLVVTDSQAFKEVECI LEKAVPLTSFSILMARYKGFLSYALEGCAVLDSLEEGDKIYIAEGCTHHRQCGDIGTVKL PKMLEKYSGKKLDFVFTEGKGFLSEEKQKELKLMIHCGACMLSEREVQSRYRDFLDKGIP ICNYGLAMAKMNGILDRAVAML >gi|333758476|gb|AFIH01000001.1| GENE 2245 2318333 - 2319781 1458 482 aa, chain - ## HITS:1 COG:CAC1356 KEGG:ns NR:ns ## COG: CAC1356 COG1060 # Protein_GI_number: 15894635 # Func_class: H Coenzyme transport and metabolism; R General function prediction only # Function: Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes # Organism: Clostridium acetobutylicum # 3 482 2 472 472 668 70.0 0 MNYNPKSLQAEEFISHEEILETLRFADEKKNDRAYIESILEKAKPIYNPNGSLHCGGLNH REASVLLACEIPDLNEKMIKLAEEIKLAFYGNRIVLFAPLYLSNYCVNGCTYCPYHAKNK TIARRKLTQEEIRQEVIALQDMGHKRLALEAGEDPVHNPIEYILESIKTIYSIHHKNGDI RRVNVNIAATTVENYRKLKEAGIGTYILFQETYHKKAYEELHPTGPKHDYRYHTEAMDRA MEGGIDDVGIGVLFGLDKYRYEFAGLLMHAEHLEAVHGVGPHTISVPRLKKADDIDPTQF DNGIDDEIFSKIIACIRIAVPYTGMIISTRESEEVRKKALSMGISQISGASRTSVGGYTD QERPHDTEQFDVSDQRTLDEVVKWLMDLGYIPSFCTACYREGRTGDRFMALCKSGQIQNC CHPNALMTLAEYLTDYASPETGKCGEELIEKELASIPNANRSRIAGEHIKSIYKSNKRDF YF >gi|333758476|gb|AFIH01000001.1| GENE 2246 2319968 - 2321080 778 370 aa, chain - ## HITS:1 COG:CAC1631 KEGG:ns NR:ns ## COG: CAC1631 COG0502 # Protein_GI_number: 15894909 # Func_class: H Coenzyme transport and metabolism # Function: Biotin synthase and related enzymes # Organism: Clostridium acetobutylicum # 22 359 15 348 350 274 43.0 2e-73 MPTHKETEKGVSELLQLLFKKHHLSLSSYEKILRERTKEEEELARSLARECTEKYYGRGV YTRGLIEFTNFCKNNCHYCGIQRDNGEVERYRLSKEEILSCCEEGYRLGFRTFVMQGGED PYFTDERIVDIVSAIRKAYPDCAITLSIGEKSGESYKKYFKAGVNRYLLRHETADEAHYQ YLHPKELSWKKRMRCLKELKEIGFQVGCGFMVGSPGQTVKTLAKDLYFIQEFQPDMCGIG PFIPQHATKFAKEKAGSLRETLFLLALLRLIKPNLLLPATTALGTIDEHGRELGILSGAN VLMPNLSPKEVRKKYLLYDNKICTGDESAQCRADLEKKMKAIGAELLVDRGDAKKEKESE SKRNRRTCCE >gi|333758476|gb|AFIH01000001.1| GENE 2247 2321067 - 2321318 377 83 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_0233 NR:ns ## KEGG: EUBREC_0233 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 4 82 2 80 81 108 67.0 5e-23 MEQESRIAVMAIIVENRDSVDELNTLLHEYGNYIVGRMGLPYEKKNLHIVSIALDAPNDT ISALAGKIGNISGISVKTAYANA >gi|333758476|gb|AFIH01000001.1| GENE 2248 2321533 - 2322357 674 274 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227873767|ref|ZP_03991996.1| ## NR: gi|227873767|ref|ZP_03991996.1| hypothetical protein HMPREF6123_1935 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_1935 [Oribacterium sinus F0268] # 1 271 17 285 286 306 65.0 8e-82 MRKEKEERNIHLKEQMMFSELLDRLEKRSKTIYREYDGKEEAAEGFGSLFSDLQEEMKLC EEDSPEKRNPRFDPEPLPKAGELLIEGENLCLLGISESDYRGYMEVEYDASFFKEAFRDE SFLRKLWEGFFQPNRAYYSIFNLNSVFLGYCGILNLQAKPWELAIALKLQYQGHGIGPES LLLLMKALKRRTGERVFRGRVDADNEASISMMRKIGGKAHGISEVFLHGEELKAYEKKKD YLVDDRLRELAKEFQVEPRELLGHALEFWVELPE >gi|333758476|gb|AFIH01000001.1| GENE 2249 2322550 - 2324241 1520 563 aa, chain - ## HITS:1 COG:L194050_1 KEGG:ns NR:ns ## COG: L194050_1 COG0446 # Protein_GI_number: 15672768 # Func_class: R General function prediction only # Function: Uncharacterized NAD(FAD)-dependent dehydrogenases # Organism: Lactococcus lactis # 2 452 4 451 456 346 40.0 7e-95 MKIVVVGGVAGGAGVAARARRIDETAEIVMFERGEHLSFSNCCLPFALSGIVDKSDKLVL MTPEGFWEKYRIKALVKHEVTEILPDKKEVKVKNLLTGECFTESYDKLALAPGANAILPA SIKGIDRENVFVLKNVSDIKKIEAFVSEKKVKKISVVGGGFIGLEVAENFRAAGKEVSLV EGLSRVLKPLDEEMAQFLHKELLDNGIQLYLGKTVSEIGEGEVVLSSGERLPAEAVIMAI GVSPETKLAKDCGIELGQTGGILVNYNYQTNYPDIYAVGDAIELTNRLSHDKSRLPLAGP AQRQARAAADHMFGETHSNRGVIGSSCLHLFKLNVANTGLNEKDCKEHGYHYDFAYTLST DKVGLMPDAHPLFFKLIFEKPTGRILGAQAVGKGSADKRIDVIAAMISMNATLEDLKELE LCYSPHYSTARDVVNQAALVALNLLHGKFRQVPVYKVRELVESKACIIDVREEKEFARGH LIHAVNIPMSQFRERLSEIPRDVPVYLHCRSSQRSYNVICALQKLGYTNLYNISGSFLGI SFYEYYRDKTEGRKPIVTEYNFN >gi|333758476|gb|AFIH01000001.1| GENE 2250 2324278 - 2325414 790 378 aa, chain - ## HITS:1 COG:BH3771 KEGG:ns NR:ns ## COG: BH3771 COG0009 # Protein_GI_number: 15616333 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation factor (SUA5) # Organism: Bacillus halodurans # 7 376 20 346 348 287 44.0 2e-77 MNTRIFSKKDIEEAAQILKAGGLVAFPTETVYGLGGNGLDKEAARKIYAAKGRPSDNPLI LHVSKMEEVYPLVESVPEKAKLLMESFWPGPLTLILKKSKIVPLESTGGLDTVALRCPDN GVTLELIERAGLPVAGPSANLSGSPSPTEASHVYHDLSGRIEGILDDGAVGIGVESTILD MSTDRPTLLRPGAITLEDLTEVLGEKPEIDPTLLGKKMEDGFIPKAPGMKYRHYAPKAEM ILFCSLEEKESEDKTSEKKGSEDRISEGKEYEYKVSKRIAEYLEEEGKGFPREKIAILCA EETKHFYQEMAEKEGIILKVLGRRDEPLSMTHNLFRTLRECDEEGIGLILSEGYSEEGIG FALMNRMKKAAGQKIIAV >gi|333758476|gb|AFIH01000001.1| GENE 2251 2325504 - 2327234 1359 576 aa, chain - ## HITS:1 COG:CAC1556 KEGG:ns NR:ns ## COG: CAC1556 COG3858 # Protein_GI_number: 15894834 # Func_class: R General function prediction only # Function: Predicted glycosyl hydrolase # Organism: Clostridium acetobutylicum # 267 571 135 438 446 101 25.0 5e-21 MENFNTEKQSRKRGRREGRSILPFFLIFFIFILGIAGFGGYYYVKKYMPTKERADLNSYF SVSGDNVELYLNHEKVKDGEQLTIGRMRDGEVYLPYGFVVRNLNIRFYYDDVEKNLRYAL PEELLLFTDGEKGESGKADFFTDGKSIFISLSLIEKHTALLSRSYTDTEHKRVFLENEFT PATVASLKKKEAVRLQGGVKSPILTDLEEGAKVIILEKMEKWSKVETEDGFIGYLRNSRL NKETSEERSSGFKAPEYSHKNLGEGVKPVLAFHQISNVESNKGLQSLLTNATGVNILAPT WYAIKDNEGNLNSYSDAAYVALSHSTGRKVFATLNNFDAGKIDLKSLLSSGTKRSKLIEA LIQDMQEKGIDGINVDIELLPEKAARDYLEFMRELSIACRKNGLYLSVDCYVPFNYNAYY NIKELGTICDYVVIMCYDEHYAGSEEAGSVSSLSYVSRGIEETVAVMDKDRIIIALPFYT RVWITDQSGKLRSEALSIKAAAAWIQEKNVSLEWLSDIGQNYGSIQDGNEKKEIWMEDEK SMKEKMKLLKENGIQGVAAWKLGQEPEGFWSILTGE >gi|333758476|gb|AFIH01000001.1| GENE 2252 2327533 - 2328609 1101 358 aa, chain - ## HITS:1 COG:BS_prfA KEGG:ns NR:ns ## COG: BS_prfA COG0216 # Protein_GI_number: 16080754 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor A # Organism: Bacillus subtilis # 1 355 1 355 356 360 54.0 2e-99 MFENLEEVKKHYEEIMENLTIPEVVSDINQYKKLILEQSNLEPIYKAYIAFRKAEESEKD ALFILDNEKDKDLIEMAKEELSTAKEDQERLTKEIQLLLLPKDENDDKNIVMEIRGGAGG EEAALFAGSLYRMYTSYAEKRGWKTELVSFNETGLGGLKEVVFIVNGQGAYSRLKYESGV HRVQRVPETESGGRIHTSTATVAVMPEVEDVEVEINPADVKMEVFRSSGAGGQHINKTSS AVRLIHVPTGMVAECQEERSQVQNREKAMRLLRARLYEIELEKQQKENAEEKRSQLGTGD RSEKIRTYNFPQGRVTDHRIKLTLYNIDAVLGGDLDLVIDPLITEDQAEKLARLEENP >gi|333758476|gb|AFIH01000001.1| GENE 2253 2329215 - 2329337 81 40 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNKTDVYELLKTKGIEHEITEHEAVFNMEELDAVELPYPD >gi|333758476|gb|AFIH01000001.1| GENE 2254 2329359 - 2331092 1426 577 aa, chain - ## HITS:1 COG:YPO1326 KEGG:ns NR:ns ## COG: YPO1326 COG2985 # Protein_GI_number: 16121608 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Yersinia pestis # 24 574 4 556 562 217 28.0 6e-56 MNIGLISHEVLETAQHITITGFSDIAHYLIANPVISIFVCLALGYLIGKLKIKSFTIGAT VGTLLVGLLISLVFKGAGTYQIDGTVKTIFFSLFIFAIGYEVGPSFFASLKSSGLKIIIL SLFFAVAAFVVSIVLFKAFGIGAGEAGGILAGSLTQSAILGTVDSTMKGMLSGTELKTAE SQMAIAYALTYVFGTVGVVVFLKNGAAKLIGVNLTDTVKKKIDQTNFHESSSENTVVGNI KARAFCIENGAEFIGKTIGSVEEQYGDDLTITQIIRKGKKVNLASDVQLLEGDTVTIIGL LDAVLHFEAPGMKETDDSEALKLDVIKQEIVLTNHFSLDVIKHLSENGIVISERKRDNNV LSEDQALKALDHLTLVGPKALIAKVVKKLGYVKDTGTETDVSFISMGLVVGLLIGAISFV VSGIPITLGSGGGALIGGLLFGYYQDKHSNYGLMPKATRWFCKSVGLNLFIAIVGLTSGA SFLSALQSMGVKVLLIGVLVTILPHIASVYFGRFVLKLDAVDIIGALCGAGTCTAALNGV VEEYESSIFAVAYTPGYAMGNILLTVLGPLVVAMCIH >gi|333758476|gb|AFIH01000001.1| GENE 2255 2331110 - 2332708 1461 532 aa, chain - ## HITS:1 COG:PH1371 KEGG:ns NR:ns ## COG: PH1371 COG0436 # Protein_GI_number: 14591174 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Pyrococcus horikoshii # 163 325 87 246 389 70 29.0 8e-12 MIKKSYERELEKLGAFEISFDMLKLSEKNEKHLKFLNAGRGNPNWINSLGRLAFARLMEF GVAESKRTLDKGDLAGYVDSKEIAERYNAFLNHGDEVDVFLKKIVEYSADHLGLDKAALI TELTNGIIGNNYPVPSRCLENTEHIINAFLQSILYGKTDLRKKTKVFPVEGGTAAIVYIF DALKHNGLIKEGDRIAINTPVFTPYIQIPRLSNFDLAEINLLATEENDWQIPDSEFEKLL DPSIKAFFLVNPSNPGSRSLTDETLEQLRKVVEKRPDLIIITDDVYGTFVNNFRTVYSVC PRNTILVYSYSKLYGVTGWRLGVIAINEDNVFDELIKKVPDKKKKELESDYSIVTLNPSE MSFIDRICADSRSIGLYHTSGLSTPQQIMMVLLSMTHLVLENEKDQYIEGCKEIVAMRYH NLMSTLGLPEDNSDCNAKYYSLLDIYQLAEKSYDKDFATWLRNHFEEIDFLLHLAKEDGV VLMEGVGFGATPGTVRVSEANLADNDYKKIANRILSLLKEYHEKYAKEKKDK >gi|333758476|gb|AFIH01000001.1| GENE 2256 2333022 - 2334509 898 495 aa, chain + ## HITS:1 COG:no KEGG:SpiBuddy_2322 NR:ns ## KEGG: SpiBuddy_2322 # Name: not_defined # Def: hypothetical protein # Organism: Spirochaeta_Buddy # Pathway: not_defined # 1 495 1 471 475 401 46.0 1e-110 MKDYYLRLTDLEINGLKNVKNGKLNFVNKRKAFKASVLGLYGQNGTGKTALIDALHILKL LLSGKSIPDEYGNYINVDSREANLSYRFRIYVSETENYDVDYEVCLTVDEQREESFSTSV VAEEVFPHLSEREGNLWNSLGKKKRRLEIKSEKLSYAYTDGEKRIKKHTFLQSTRTELIA PKKYYALLFGRKKKTAERLKLISFMAKQKSQSLFFSAAFLQLLFEQLNASKTPNDELLFH IDILVKLANYGRTELFVLGASSTGKINLGELPIRYKASEKQEHGITGEYFLSLYEATELP EELFPEAKRLIQNINGVLEQIIPGLTISVADLGAVMLMENGEGKKGRRIQLMSNKNSKEI PLRCESEGIKKIVSVLHLLIGMYNQSSITVAIDELDAGIFEYLLGEILHILSEKGKGQLI FTSHNLRPLETIDRGFIAFTTTNPENRYIRFTNIKTTNNLRDFYFRDIVLGEQNEPVYEM TNNAEIALALREAGE >gi|333758476|gb|AFIH01000001.1| GENE 2257 2334511 - 2335206 441 231 aa, chain + ## HITS:1 COG:no KEGG:Cphy_3169 NR:ns ## KEGG: Cphy_3169 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 1 223 1 225 231 162 39.0 1e-38 MARKKIVFVIVEGPSDDEALGAIFSRAFDKNAVYVEVMHGDITSVKGNHSGNIVGKVGDL LKQYAKSNHYSKSDFLKVIHIMDTDGAFISDKNVVEDHSLRTLQYSLSEIRCKDAALIRS RNQQKSENMDKLSRQSQVWDSVPYQCYYMSSNLDHVLHNLLNCSSEDKERNAFLFAKKYK NALGEFLQFLCESDFSVNTSYREYWDFIKEGLRSLERHSNLGLCFEYISLK >gi|333758476|gb|AFIH01000001.1| GENE 2258 2335342 - 2335626 259 94 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227873771|ref|ZP_03992000.1| ## NR: gi|227873771|ref|ZP_03992000.1| hypothetical protein HMPREF6123_1939 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_1939 [Oribacterium sinus F0268] # 1 88 1 88 96 80 42.0 3e-14 MKLQFYGSHLCPKCVESQKILKEKGVEYEFIDVNGDLYNLKRFLAFWVQEDIFKPFREQA EKPDYADEGRIGLPCFRLEDGECTMDLDYVLTKV >gi|333758476|gb|AFIH01000001.1| GENE 2259 2335643 - 2335825 160 60 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNSKIPRIAYCTKSLSLGSELTALSIKLRFCSFSASAELSKRFVPQAMRGIFISLSHVKL >gi|333758476|gb|AFIH01000001.1| GENE 2260 2335822 - 2336610 1007 262 aa, chain - ## HITS:1 COG:FN0206 KEGG:ns NR:ns ## COG: FN0206 COG1924 # Protein_GI_number: 19703551 # Func_class: I Lipid transport and metabolism # Function: Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) # Organism: Fusobacterium nucleatum # 6 256 7 259 265 174 41.0 2e-43 MERKFLGIDIGSTAAKAVVLDEKGEIEQAFTVPTGWSSFEALKSIGSKLSMPMDEEHYAC IATGYGRNAVAFAGKTMTEITCHAKGAMTLFGKNPMNVVDVGGQDTKVITCQGKAVEEFF MNDKCSAGTGKFLEVMANRLNISLEELNELARKHTEEVKISSMCTVFAESEVISLVGQGI ARENIAYGILQSVAGKVSQMLGKLRNQDLDVYLTGGLCEAEYFQELLSEVLGRPIHSDRY ARYAGALGAAVFAKEQAEKGRI >gi|333758476|gb|AFIH01000001.1| GENE 2261 2336700 - 2337851 1339 383 aa, chain - ## HITS:1 COG:ECs5298 KEGG:ns NR:ns ## COG: ECs5298 COG1775 # Protein_GI_number: 15834552 # Func_class: E Amino acid transport and metabolism # Function: Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB # Organism: Escherichia coli O157:H7 # 1 383 8 390 390 471 57.0 1e-132 MELVKDLPEIFASFSEQRQKSFLSVKEWKDKGKPVVGSYCTYFPKEIAMAAGAASISLCA TSDETIPEAEKDLPKNLCPLIKSSYGFAKTDKCPFFYFSDVVVGESTCDGKKKMYELMSE FKDVFFLRLPHEQTEKAVALYRDEIVRLKDYLEQKFEVKITEEMVREATRVNNLANKALK DLYSVMKHDPTPVSGYDIFKVLYGSTFRFDRAALADEVNALREKIEREYAEGKHFEKRPR ILITGCPIGGATEKVIRAVEDNGAVVIGYENCSGEKAVGIQVEENAKDIYEALSRRYLAI GCSIMTPNKNRFDSLSEMIDEYHADGVLDMTLQACHTYAIETNKVRRFVTEEKGIPYINV ETDYSQSDIGQLNTRVAAFIEML >gi|333758476|gb|AFIH01000001.1| GENE 2262 2338063 - 2338968 436 301 aa, chain - ## HITS:1 COG:YPO0401 KEGG:ns NR:ns ## COG: YPO0401 COG2207 # Protein_GI_number: 16120735 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Yersinia pestis # 182 300 171 289 291 63 27.0 6e-10 MDYQSVCLKDCMEIREIVSLHYFQYRSDFYFPGETHPFWEFVCVDAGEITVEAGEETHLL KKGDILFHAPNEFHSVKADGKSSPSIVVISFYCNSPAIWRFQKKCLRISDKEKSLLAKII TEGKGVFSGRMDQPYQKKLLFLEEESFGGQQLIRQYLSEFLIQLYRRYFSYPLPMEAKDY YVEKSSRQSESYNRLVEYLESHVYEKLSMERICRDNLMGRSYVQKIFREVGNTGVMALFS KMKMDTAKRMIREGQLNLTQIADKLEFSSIHYFSRQFKKECKMSPSEYSSSIRSLSEERE D >gi|333758476|gb|AFIH01000001.1| GENE 2263 2339339 - 2341621 2037 760 aa, chain + ## HITS:1 COG:no KEGG:BCAH187_A2105 NR:ns ## KEGG: BCAH187_A2105 # Name: not_defined # Def: hypothetical protein # Organism: B.cereus_AH187 # Pathway: not_defined # 1 756 1 716 723 986 61.0 0 MKKTSGRLTLPSENNFLKETEELIARLGADAIRDSDGTKLDEETLSLPVKVYSTYFVARG HNEFAKEHMEECQQFYLMSKRVTAFSTHLEIPYMDGFFRKQVTPDFLHDPKKWWELIDRT TGEVISPDKWRLSPDKFGKDSGEKAVASKENSKSSTEKTTEAGLPSYFLQDGETALLILE DAIPFHEYTLSFLAFALWDPTEMYNHITNNWGDKPADIPFDIRKPYSNRFAKEELKRWLE AHPKTDVVRFTTFFYHFTLQFNHEEKEKFVDWFGYGGTVSVEALEAFEKEYGYRLRPEDL VDEGYFHSTFRTPTKAYLDYMDFIARFVAKEAKELVDLVHASGKEAMMFLGDNWIGTEPY GKYFKEIGLDSVVGSVGGGATLRLIADIPGVRYTEGRFLPYFFPDTFYEGNDPVPEAMEN WVSARRAIMRKPVDRIGYGGYLSLAYKFPKFIDYIAEVAEEFRDLYEKVQGTKPYTKLKV GIVNAWGKLRSWQAYMVAHALYYQKAYSYFGILEALSGMDTEVEFYSFDELLEGGVPKDV DVLINAGDAMTSWSGGEIWKEEKLLSLLRAFVYNGGGLIGVGEPSACSFQGKYFQLADVF GVDKEMGFSLSTDKYFKTAKTEHFLLEDFPAESLNFGESQKSIYALEKETEILEYSDGSV HLSAHDYGKGRGIYIAGLPYNMENTRLLLRALLYSAHKEEEMRKWQCTNLSCELHAYPEK GIYAVVNNSKEKQCTDFYDGKGEKHSANLAPGAMLWYEIG >gi|333758476|gb|AFIH01000001.1| GENE 2264 2341850 - 2343163 1290 437 aa, chain + ## HITS:1 COG:BS_yurO KEGG:ns NR:ns ## COG: BS_yurO COG1653 # Protein_GI_number: 16080313 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Bacillus subtilis # 166 437 143 412 422 71 23.0 3e-12 MKRRILGTAVAILSGLTLFACGGKKEEAKTEAPANAQEKTDEKDTSAAEKTEASSDGLVY WSMWEATEPQGQVLKEAVEAFTAETGIPVDVQFKGRTGIREGLQPALDAGTNIDLFDEDI DRVNKTWGDYLLDLEELAKANDYEKTANAGLINACREVGGGTLKSIPYQPNVFAMFYNQE IFDKAGVTEVPKTWEELDAACAKIKEAGFTPITSDDAYILSNFGYHLSRINGYEKASEIV KEGKWDDPSVLEVAKAYEDFAKKGYFSEQIASNVWPAGQNQELALGTAAIYLNGSWLPNE VKDITGEDFSWGCFSYPAVKGGKDGVEASNYGAQVFAINKKSKKAEDAFKLIQFFTKGKF DEKLSQESLGIPADSDNKDWPKQLANVRPVMEELKTRYPWAASAEDNVDMTPILKENFMK LCGGSITAEEFVANLKK >gi|333758476|gb|AFIH01000001.1| GENE 2265 2343255 - 2344160 764 301 aa, chain + ## HITS:1 COG:mlr7001 KEGG:ns NR:ns ## COG: mlr7001 COG1175 # Protein_GI_number: 13475831 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Mesorhizobium loti # 9 287 33 305 317 98 27.0 1e-20 MKKNSAMLIAFVSPAALFFIIIFLYPILRTLLMSFFRIEGVTDSFSKWQFVGFANYGKLL GTTLFRISMWNLFRIWLFGGLIVLSLALLFAVIITSGIRGRSFFRAMIYLPNIVSAVALA TMWLQYVYSPKFGLLKSLFTFLHLPKLASIQWLSNDHKFMALLIAYCFGMVGYHMLIFSS GIERISSDYFEAATLDGANKIQQFQHITLPLLKGMFHTNITMWSVSSVGFFVWSQLFSTV TADTQTITPMVYMYMQIFGAGNSVTERNAGIGAAVGVLLSICVVIIFTVCNKLLQDKELE F >gi|333758476|gb|AFIH01000001.1| GENE 2266 2344171 - 2345058 664 295 aa, chain + ## HITS:1 COG:BH3682 KEGG:ns NR:ns ## COG: BH3682 COG0395 # Protein_GI_number: 15616244 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Bacillus halodurans # 67 295 71 293 293 140 34.0 3e-33 MFSLFKKEKNYAEPFRLKKELRLFPGYLLLLLWIFFTIVLLGWVLIASFSTTKEIFANKL LSSGFHFENYEKAWVNSDVSTIFFNSLFYSLVSVSLLILVCAPAAYALSRFEFIGNKLIQ HSFVASMGVPVVMIVLPLFALVAGLDILNHVAANKLTLIFLYVGINVPYTTIFLMGFFAN ISRAFEEAAAIDGCPPGKTFWKIMLPMAQPGIITVSIFNFINVWNEYFISLIFGNSDKVR SVAVGLYSMINSMKYTGDWAGMFASVIIVFLPTFILYLFLSERIIAGVTGGGVKG >gi|333758476|gb|AFIH01000001.1| GENE 2267 2345158 - 2346255 1038 365 aa, chain + ## HITS:1 COG:no KEGG:Cphy_0570 NR:ns ## KEGG: Cphy_0570 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 1 364 1 369 370 409 56.0 1e-112 MNKELSKKEIENALSQFQIQGEVKSCAPYGSGHINDTFLVKADRDYILQRMNTNIFKHPK ELMENVTLVCDFMEKEILKAGGDPEREGLRLVPTKAGLGYYEDQEENFFRMYLFVEDTKS YNLVEKPEHFYESARAFGHFQNLLASFPAEKLHETIPDFHNSVKRFARFKEVLEKDAFGR RKDCEEEVQFFLNHEKDLSYAMDLLAKKELPLRVSHNDTKLNNVLFDAKTEKALCIIDLD TVMPGLSIFDFGDAIRFGANTAEEDEKDLSKVSLSLPLFSTYVKGFLEGAGGKLTKKEIE SLPEGAKIMTLECGMRFLTDYLEGDVYFHTARPGHNLDRARTQIALVKDMERHWEEMKKE TNQYT >gi|333758476|gb|AFIH01000001.1| GENE 2268 2346332 - 2347051 238 239 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 [Bacillus selenitireducens MLS10] # 5 229 6 223 234 96 31 5e-18 MKNIALIIAGGVGSRMHQDIPKQFLNVNDKPIIIYTLEAFQKHPNIDAIEVVCLKGWRDI LCAYAKQFGITKLENVVTGGETGLKSIRKGLYDIAKRYQGEDDIVLIHDAIRPMVSQDII SDNIRVCREYGNAITVIPCTAVMLKTMDGLSSMDQVPRDNLKITQTPQTFFLKEILEVHK EAIEKGIDDSVASCSLYVELGRKLYHSIGSEKNIKLTTSEDIEIFTALLSVERPDWLRK >gi|333758476|gb|AFIH01000001.1| GENE 2269 2347073 - 2347555 440 160 aa, chain + ## HITS:1 COG:CAC2880 KEGG:ns NR:ns ## COG: CAC2880 COG0698 # Protein_GI_number: 15896134 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase RpiB # Organism: Clostridium acetobutylicum # 1 145 1 145 152 107 37.0 1e-23 MRIALGSDRNGLDYKKRIIAHLKELGHETVDVGTEENIPCDTPVFAAKAAKLVASRDCQY GILLCATGTGMVMAANKVKGILCGLGYADLVTEYMRKHNDANMIAFGQKHMGYEDVEHRV DIFLNTEFIGGHHAPRVQQVRDLEEGKEIQQTPIMNPNWR >gi|333758476|gb|AFIH01000001.1| GENE 2270 2347559 - 2349316 1425 585 aa, chain + ## HITS:1 COG:CAP0106 KEGG:ns NR:ns ## COG: CAP0106 COG1154 # Protein_GI_number: 15004809 # Func_class: H Coenzyme transport and metabolism; I Lipid transport and metabolism # Function: Deoxyxylulose-5-phosphate synthase # Organism: Clostridium acetobutylicum # 1 583 1 586 586 641 53.0 0 MIIEKINSPEDVQALSSEELKTLSAEIRDCLIRKLSKTGGHLGSNLGMIEITVALHKVFH SPVDKILFDVSHQCYTHKILTGRKQAFLEEAHYHDVSGYSNPAESVHDFFPIGHTSTAIS LATGMAKVRDLQGGKEQIVAVIGDASLDGGEAFEALNYVAELDGPVIIVVNDNDMSIPEN YGGLHNLLNRLKAQNGEVENNFFKSLGLEYVLVRDGHDIDALTEAFSSAKNSGKSTVIHC CTQKGKGYSFAEKDREKWHWAKPFSIESGEFLSSVPKENYGALVAEHLLAKMKEDPRVVV VAASTPLCIGFHEENRKKAGKQYIDVGIAEQNAITMTAAMAKAGGKPVFATNSTFYQRAY DQIAQEMCLGKCPATLLLSHASVWGHTNDTHVGLYDMALLSSIPNLTYLAPTNLEEYLAI LDWSIEQEENTVAIRIPWTGVYHAEKAVRKDYSDVKYMVTEEGEEVAILALGSFYQIGAE VREKLKAAGIHASLINPLYINKKDETLLESLKKKHRLVVTLEDGILQGGFGSMISQYYSL DKMKVLNKGFFKAIPSSYVPEEFMRENRLLPEQITEDIIELIKEK >gi|333758476|gb|AFIH01000001.1| GENE 2271 2349317 - 2350348 729 343 aa, chain + ## HITS:1 COG:SMb20239 KEGG:ns NR:ns ## COG: SMb20239 COG0451 # Protein_GI_number: 16263977 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Sinorhizobium meliloti # 25 342 9 318 346 90 27.0 4e-18 MRLSTIEREELTKYIETHSFDRDFKGKTILLTGAKGLVGTAITKWILLQNEIKKTDTVLY ASTRNPEQVPDYIEDGDQIHYIPHGKEAEYCKAPDYILHAASPTGNQYHMQYPLETFRTN VDGMERLLDLCSQKKDTVLLYLSSEEVYGLPKDDAPLVTEETVGAIDSLHLRSCYPLGKK ACEFLCHAAAKEYHLNTRIIRPTVIHGLFQRYEEPRVVNEILRCIVENKDLHMKSDGLTK KCMLYSLDAISAIFTVLLKGENGEAYNASNPDTFLTVRDLADRVFQKFNPSIKIVFENAA KQSDGFLPHRSIVQDCTKLKALGWEPKADLEHIYHVDIARFKK >gi|333758476|gb|AFIH01000001.1| GENE 2272 2350320 - 2350436 75 38 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSILPGLRNSFKIKLRKSLTECHPGTPGHSVSFLSNLM >gi|333758476|gb|AFIH01000001.1| GENE 2273 2350543 - 2351595 858 350 aa, chain + ## HITS:1 COG:SA1154 KEGG:ns NR:ns ## COG: SA1154 COG2008 # Protein_GI_number: 15926897 # Func_class: E Amino acid transport and metabolism # Function: Threonine aldolase # Organism: Staphylococcus aureus N315 # 13 350 4 341 341 358 49.0 1e-98 MQSKECGEKRLYFNSDYLAGCHERILQSLIETNLIKAPGYGTDEFTLAAKKKILNACELE EGDVYFLVGGTQTNDTVISTFLRSYEGVISADTGHIATHEAGIIEVHGHKVLTIPHKEGK IYPAQIREYMVHFHADGNNAHMVQPRLVYLSQPTEFGTLYSLQELKDIREICNKYSLSLY VDGARLAYALACPENDVRLPDLAKLCDAFYIGGTKCGALFGEAVVIPEKRNFPFFPTTIK QHGALLAKGKALGVQFDALFTDDLYLQIGKHAIELADTIRSALRKKGIPLAVSSPTNQIF ILLKKEEAERIGKAVELTHWDDPDDEHSILRICTSWSTEEEDVEKLLAIL >gi|333758476|gb|AFIH01000001.1| GENE 2274 2351856 - 2352671 806 271 aa, chain - ## HITS:1 COG:BH3616 KEGG:ns NR:ns ## COG: BH3616 COG1344 # Protein_GI_number: 15616178 # Func_class: N Cell motility # Function: Flagellin and related hook-associated proteins # Organism: Bacillus halodurans # 1 271 1 272 272 218 51.0 9e-57 MVIQHNIAANNAYRNLSMNATGSQKNLEKLSSGYRINRSADDAAGLAISEQMRSKINGLD QATQNAQDGIGLIQTAEGALTETHNMLQRLVTLSTQAANGTYNTTARSSIKEEVEELKKE ITRIADTTDYNGVKPIATGATKPITLQIGPTSGEILTVAVSELNASKLGISGIVVTSVSK ANTAITKLNAAIDQVSKHRAKLGAAQNRLEHTINNLKVTSENMTSAESRIRDTDMAKEIA AFTKNNILNQAAQSMLAQANQQPQGVLSLLR >gi|333758476|gb|AFIH01000001.1| GENE 2275 2353018 - 2353833 740 271 aa, chain - ## HITS:1 COG:L178933 KEGG:ns NR:ns ## COG: L178933 COG0599 # Protein_GI_number: 15673518 # Func_class: S Function unknown # Function: Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit # Organism: Lactococcus lactis # 1 102 1 102 102 135 62.0 6e-32 MKKQTAGREYLGRIAPQFAELNDDVLFGKVWAREKELSLRDRSMITIASLLTAGQYPQLK SHLALGKEHGIQKEEVVEIITQLAFYCGWPKAWSAFPLIEEIYGEGPAISEERTAIAEHN RITDQNPNSGRKRITAMPETLAPFPVGEENTTYLDHFVGKSYLATLSLGQMNVFHVSFTP GARNNWHVHRADRGGGQLLLCTYGRGWYQEWGKEARELHAGDTVFIPAHVKHWHGAASDS WFQHIAEELPGEHCSLEWCEAVSDEDYNQLP >gi|333758476|gb|AFIH01000001.1| GENE 2276 2354100 - 2355380 1448 426 aa, chain - ## HITS:1 COG:Rv2684 KEGG:ns NR:ns ## COG: Rv2684 COG1055 # Protein_GI_number: 15609821 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/H+ antiporter NhaD and related arsenite permeases # Organism: Mycobacterium tuberculosis H37Rv # 3 425 1 424 429 140 28.0 5e-33 MNLQMIAIILFILMYVVMIAKTEWRLYAIWSVAVLFVLFGILKRNPLYWLSIINWNVIMM IGGTMVIVYYFIESKMPNRLAEIILEKCPTVMWVIILMSLFAGAVSAFIDNVATVLMIAP VGLAICKKLKISPVSMLLAIAVSSNLQGAATLVGDTTSIMLGAYAKMNFMQFFFMHGRPG IFWAVELGALLTVPVMIFLFHKLNQPVEATEKTEVEGIFPTVALCGVVVCLIIASFIPNT PSTINGIICCVIAVLCMLMDFRMKRMPENLKKAVLSVDFETLCILTGLFLVIQGITDVGI IAMVANGIAKVGGKNLFLLYTIIVWGSVLFSAFVDNIPYVATMLPIITGISQLLGIEPYL LYFGLLSGATLGGNITPIGASANITAVGMLKQNGYTVKFSDFMKIGIPFTFVAVMAGYLF IWFTWH >gi|333758476|gb|AFIH01000001.1| GENE 2277 2355395 - 2355856 565 153 aa, chain - ## HITS:1 COG:CAC0836 KEGG:ns NR:ns ## COG: CAC0836 COG2731 # Protein_GI_number: 15894123 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase, beta subunit # Organism: Clostridium acetobutylicum # 1 149 1 149 152 73 29.0 1e-13 MIIDHLDNIHFYAPLLPNLEKGLQAIREEKEKAGGEIPAGRYDFDGGFFKVERGKTKAFS DGTYEAHKNFIDVQIIEEGSEEIAWAILEELTESIPYNAEKDAARYTGDFSHQMKIKKGM FWAAFPWDGHRPGAHSKEEQNYTKIILKLPFKE >gi|333758476|gb|AFIH01000001.1| GENE 2278 2355952 - 2356206 140 84 aa, chain - ## HITS:1 COG:SP1740 KEGG:ns NR:ns ## COG: SP1740 COG4115 # Protein_GI_number: 15901572 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 5 82 5 84 84 90 56.0 1e-18 MRKIWSDEAWEDYLYWQGQDKKTLKRINSLIKDIERNGLQGIGKSEPLKYRDGWSRRIDK ENRLVFTIVSGELLIVSCRGHYEK >gi|333758476|gb|AFIH01000001.1| GENE 2279 2356208 - 2356453 337 81 aa, chain - ## HITS:1 COG:no KEGG:Dtox_4301 NR:ns ## KEGG: Dtox_4301 # Name: not_defined # Def: prevent-host-death family protein # Organism: D.acetoxidans # Pathway: not_defined # 1 80 1 80 84 90 61.0 2e-17 MIAVNYTTMRNNLKEYCDLATDNGETIIITRKEDKNVVVLSLEQFNEMEKELRNARYLDK LERGFKQLLDGKGTVHELIED >gi|333758476|gb|AFIH01000001.1| GENE 2280 2356551 - 2357216 676 221 aa, chain - ## HITS:1 COG:MTH1452 KEGG:ns NR:ns ## COG: MTH1452 COG1917 # Protein_GI_number: 15679449 # Func_class: S Function unknown # Function: Uncharacterized conserved protein, contains double-stranded beta-helix domain # Organism: Methanothermobacter thermautotrophicus # 123 218 1 96 99 62 33.0 7e-10 MKLEAGKVFSIEKENQPLKGCTVSKELEGGRNPILIFSMDRNTDISPEIFSEHKFLILHA GDLEVYGGKSQKLQNPTVLSQGESILCKVDEPVGMRSKQGAIYTEINIRREDKMNEVIKA GEVFQLKDLLPYGEGKIVNMDVVHNEKMKFVLMAFDEGTGLSEHAAPGEAIFFALEGEAI INYEGTDHTIHAGEQFHFAKGGRHSVKALGKFKMALLLTLE >gi|333758476|gb|AFIH01000001.1| GENE 2281 2357462 - 2359690 1576 742 aa, chain + ## HITS:1 COG:CAC0120 KEGG:ns NR:ns ## COG: CAC0120 COG0840 # Protein_GI_number: 15893416 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Clostridium acetobutylicum # 424 737 205 517 555 188 39.0 4e-47 MKKKAATRENTGKSSRWKKMKLSSRISVITGFLSILILAAVSISIIYMGKNALYKSLQGN MNDKIRLGIADLDNVVTQAETTANTIKDGMIYIYDQTDLSGGVPANPWTIYDDYGNLLET KDMSGTIFRSRIIDTTIPASRYNAETTILDSLYSAIKNNESLLGAGVFLEPDAFYKGIDE YAPYMTSEQVQKREVTNAAYVNYKDQEYYLRARESKGLVLTNAYENFGTNEYVVSVVEPI FYGNEFKGVVILDMNTEAFGIVEQEDSRFKTLYSSVVDTNGFVMYSMDAEEDKKNLKDVL PADSMSTLQSFFDKNEPFSTHIANSKGELLQYNAMPLQVEGVTWWVSISVSEKEYTSAIS HMVLVALPLSLLGILILVAAGHFFIRKGLEPLQSIVTAGDRLAVGDFSQDIQYAYQDEIG SIFLSMGRVVSRIKSIIHDLSEKLSQIAKGDLSTDFQNTDLYIGEYSPLLDNLKEILLDL NNTMGEIKDSSTSVNSSAFKLSESAQYLSDGASDQASSIEELSVTMDEISANIQETANRS IHALTLSDQAEQAVGRSNLKMEEMSEAMTEITEKSHEISKIIKTIDDIAFQTNILSLNAA IEAARAGVAGKGFAVVADEVGNLAQKSAEAAKNTANLIQETISSVNKGAKISTETKESLS LVSEQTQKINTIISSISNASEKEADGIQQLSNGLTQISSVVQKNNATAEESALASTALSK QSERMNGLVGKFKLRRKREDND >gi|333758476|gb|AFIH01000001.1| GENE 2282 2359880 - 2361937 1920 685 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227873671|ref|ZP_03991906.1| ## NR: gi|227873671|ref|ZP_03991906.1| cell wall surface anchor family protein [Oribacterium sinus F0268] cell wall surface anchor family protein [Oribacterium sinus F0268] # 140 683 97 600 601 368 50.0 1e-100 MRKKNLKIQVAALAVTGAIATTPFVARAEETSSAAVTSTEATAPTTATAAGTTTAAPAST ATTVESTAATTAAPASTATAVESTAATTGTTTTAPAASGVATTAAASTTGTGASSAASGT TAATAGTTTTATAATPAAPVTVTEPAADPATTVPNKVNNVVNKDDFQGTKINADGVSFEI TPDDVKDKTELSVKSSEFNGTEYANKESGDLVMKGDLSIKEQGTGNFDSTEIAAHDVESG KPYSLKADLDVSAVTNAILASEEVGDKIAGKDNAKATYVNDLETGLRATFTMGDKLDGSF YLPTDLEDAKQHYALSASDGKRMIFRINYANSTFAKDKVSIAMDLDLSNITPFKTTYENG KNGPDLYSTTIIKGKDGKNYTVSTVENFRHTFKRGFFNPAKDNAGEYAGTYPDDSKKNAD GTYKNKVTYNTSTFGNLRKIVSESAQKIQLIMTGVQFNSAKGNKQSASESTETATEVTTT TTTTTEGTINGTLVGYMKASLGARGWRDAAYKWGAIQDDAGRDSVAGQDNDKVYLTVKFT DKERTVTPIAPVNPVQPENPVNPVQPVNPSNGGNGSNGGNGGSRTPIVNPSTPSQPGNVL GEDRPTPSNQGEVLGENRPAPTAVETVEKKGEVLGESRPSGKNVSGRAAVATGDNNFTAL WASLFGLSAASLAGFVVLRKKEQEA >gi|333758476|gb|AFIH01000001.1| GENE 2283 2362259 - 2362972 667 237 aa, chain - ## HITS:1 COG:CAC0748 KEGG:ns NR:ns ## COG: CAC0748 COG0778 # Protein_GI_number: 15894035 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Clostridium acetobutylicum # 8 236 10 240 241 145 35.0 7e-35 MDETILHRKSQRYFSKEELQEDCIRKIQEEILEVNAESGFTIEFVEDGSRAFSRFGKSYG LFKNVRSLLLLKGNPGQPHFREKIGYYGEKLLLFAEGLGLSTCWVGGTFDRESFSYAEEE HVQAVILLGYPGDEGLRGKLFHSLLPTKKKDWTARIEGDRSYPKWVKEGMEAVALAPSAL NKQKPFFHYHNGIVTATVENSYEMDLVDLGIAKLHFVLGVGCGHFVPGNGGEFAPED >gi|333758476|gb|AFIH01000001.1| GENE 2284 2362974 - 2363834 776 286 aa, chain - ## HITS:1 COG:SA0684 KEGG:ns NR:ns ## COG: SA0684 COG0697 # Protein_GI_number: 15926406 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Staphylococcus aureus N315 # 8 285 2 278 288 186 40.0 6e-47 MSEQIVNDKRLKGIISIMISAAGFAGMSFFVKLSGKVPVIEKAMFRNAVALVVAYIIMRR EGVSFYVEKKNRLPLFLRCFFGTAGLICNFWAIGYLKLGDSSILQKMAPFFSIVMSIFIL QEKPNLTSIVSVLVALIGAAFVVKPGQGLLGLPALVGLLGGFCAGTAFTFVRKLGTHGVR GAQIVFYFSFISSIALLPICLLQFRPLSAEQLLFLTGAGLCAAVGQIFVTKAYSYAPAKE ISVFDYSQVIFSAILGFVILGELPDIYSFIGYALIFSMAIWKWKKD >gi|333758476|gb|AFIH01000001.1| GENE 2285 2363831 - 2365030 1434 399 aa, chain - ## HITS:1 COG:STM4425 KEGG:ns NR:ns ## COG: STM4425 COG0673 # Protein_GI_number: 16767671 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Salmonella typhimurium LT2 # 8 158 6 153 336 66 26.0 1e-10 MGRKINLGVVGLGQRGAELVKNVYSEHPDVEFIALCDVYEDRREDIAKALEEMGRERPKC FSDYREMLEMKELDAVLISASWDTHSEIAIAAMRAGKAVASEVGGAYSVAECWRLVDCYE ETKTPIMFMENCVYGRDEMMVYHMAETGVLGEIVHCEGGYKHDLREEIAFGRENRHYRLD NYIHRNSENYPTHELGPIAKILHINRGNRMLSLCSMASKAAGLRDYIQEKKPEDKVLQNT VFQQGDIVNTMIHCSNGESILLTLDTTLPRAYSRGFTVQGTKGMYMEDNASIFLDGDEGA KDHFDWKKQWGNVERFRAQYEHPLWKDYLKAGVKKGHGGMDYLVFSEFIHCLQEGLPMPI DVYDMASWMSITALSEESIALGGQAVAIPDFTNGKWIKR >gi|333758476|gb|AFIH01000001.1| GENE 2286 2365063 - 2365167 125 34 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSVDKETKAKVINFRNYVRIENSLRKNKRIGCTV >gi|333758476|gb|AFIH01000001.1| GENE 2287 2365343 - 2367034 1593 563 aa, chain + ## HITS:1 COG:CAC3634 KEGG:ns NR:ns ## COG: CAC3634 COG4166 # Protein_GI_number: 15896868 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Clostridium acetobutylicum # 55 556 40 543 550 295 32.0 1e-79 MKKILANAVSLGLLALSLSACGAAKENSNLQTTAGESSAEEKAQELTDAGSPIDKLDVCI GPSPETMDPQLNSTLDGGTMIMHCFEGLLKYGEDGKVLPAMAESWEASKDGLSWTFHLRD GLKWSDGQELSAEDFIYSFRRLADQKTAAPYGYDMLNMVAGYEEAAKGNPEALQVEAPDK KTFIVHLSTPLSYYEKIAAFVSLVPLRKDILEKNGESWSINASSYISNGAYQMSEFVDGD YISLKKNPYYYDADKVNVNELIFHLVDDDNSAYNAYQEGSLDVTSRIPSEEMSTLRNTED FKTYPMLGTSGMVFNTEKAPFDNPKVRKAFALAIDKKYIAENIFEGYRTPASTFVCEGIT DPADGSSFVEKTLQDYGTPFHPDDYEKDLEEAKKLMAEAGFPNGEGFPKVKYLNNAGGAN NTISEYLQSAFKELGVELEIDTQEWKVVSATQHVGDFQLTRFAWVYDYNEPSQLLNVFRS KDRNNYGRYSNEAYDKLMQEAMAESDGEKRSKLLHEAEQILLEDLPMAPMVFSKDNYLVR PNLKGMQHLETGNTYFMYCTRTE >gi|333758476|gb|AFIH01000001.1| GENE 2288 2367189 - 2368946 1396 585 aa, chain - ## HITS:1 COG:SP2136 KEGG:ns NR:ns ## COG: SP2136 COG5263 # Protein_GI_number: 15901950 # Func_class: R General function prediction only # Function: FOG: Glucan-binding domain (YG repeat) # Organism: Streptococcus pneumoniae TIGR4 # 29 136 517 619 621 84 39.0 7e-16 MKHWAKKGLIPLSIAALTAFSPLAVRAEESGTAGKWVQTGDTWIFLDQNGQKKTGWVEDK GQKYFIDPVKGTLATGWVQMEGKWYFLDTKEASLGKLAQGWQWIDGYCYYFAADTGKMAE NEKTPDGYFVSSGGKWANEKGESVFKPELGVKSTVEKEKEAEKERKQTEALNAGGQDKES TVAFNGGGSGGGSGIRSGGSGGSGGGGGRSGGGSGSAGGAGSGSTSAWQTSYNPSTTNPF ETAEELYQYHAQNELRRKEEIERRAEAERKQREKEEAQQKKDSEEEARRKAERDRLEREA LEKKRLEERRESFFIAGVDLQESDFSSKKVHVEEKTYSYGFKEYAAGSGIIDRANITEQV ENAEGEKAYSAALSYYAIERDLLDYYLKSHDAEVQNILRDNEDASLRIFGRNHKLKTVLE EKENGAGQTAIALYKKAAEAGTAVSSASNLSADARGKKIPANYSEEALLSRRNSGNLNSF SEWAKEQIENNQPFILEHSGLRDVKKKTSGVALVLGGEWTHAGKLTALYLTEPDDFLHGV KRYEVEERGNAVVLVPGNHSSVYATVRGLYSAEFYTDGLENHLAQ >gi|333758476|gb|AFIH01000001.1| GENE 2289 2369446 - 2369655 107 69 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MESDYLMSTLAKPMKSSQDLVEHMKSKGITFNIVSPEDAVQYMKKIITISVWRPTVRTII NDLIQSKIQ >gi|333758476|gb|AFIH01000001.1| GENE 2290 2369598 - 2370416 304 272 aa, chain + ## HITS:1 COG:no KEGG:Elen_1519 NR:ns ## KEGG: Elen_1519 # Name: not_defined # Def: Abi family protein # Organism: E.lenta # Pathway: not_defined # 1 270 51 319 321 157 36.0 3e-37 MASYRKNYNKRLDSKQNPIDEYVNLDFGYLQDLAIIDMELRYTFIQLTLDIEHFAKMDLL GEIERHNEDGYKIVSDFLDAQKTDRKQHIQSELQQNQNSYYTKDVYNKYNPDFPAWVFLE LLPFGTVLDFYLFCAKRFNSKPMCDRFYIMIRCKNVRNACAHNDCLINDFHIGTAPYQPK YPVIQKLALIPSLSSASRRRRMQNERMQELIYVLYIHNEIVTSKGVHDKATQKLHAFKDR MMRHDDYYNTNQLIAANFNFLKLVIDNWFSIV >gi|333758476|gb|AFIH01000001.1| GENE 2291 2370577 - 2370819 63 80 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSIAFSPSTEKGKFYYFRIAKMFETDVEFFGTFPVSYLGLYEVLSNDNGTNHSIDGIIKN SKGEEIRKILPLLNSLLTPA >gi|333758476|gb|AFIH01000001.1| GENE 2292 2370816 - 2371703 831 295 aa, chain - ## HITS:1 COG:mll0601 KEGG:ns NR:ns ## COG: mll0601 COG0596 # Protein_GI_number: 13470803 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Mesorhizobium loti # 6 295 9 300 301 189 36.0 7e-48 MAKITEGMMPYLNYETYYRIVGEKNPKKAPLLLLHGGPGSTHNYFELLDDIADRDQRQII MYDQLGCGKSFLEGRPELWTKETWVEELIELRKHLNLEEIHLLGQSWGGMLAIIYGSDCA PKGIKSMILSSTLPYNSVWESEQKRRIGYMGKDVQEAFRKAEETGNYEAPEYLSALKLFM ERYCAGPFPESSPECLKRKKIVGTESYVSAWGPNEFTPTGSLRDYDYREKLRSFSYPTMI FSGAEDLCSPYIAKLMYDAIPNAEWELFPNSRHMCFVDEPEKYKVLLIDWLNRHD >gi|333758476|gb|AFIH01000001.1| GENE 2293 2371713 - 2372819 1088 368 aa, chain - ## HITS:1 COG:CAC2788 KEGG:ns NR:ns ## COG: CAC2788 COG0006 # Protein_GI_number: 15896043 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Clostridium acetobutylicum # 1 359 1 358 358 322 46.0 6e-88 MDREKLKRIYKKMEERNLSQMIITDPPAIFYLTGKWIHPGERMLALYISTKGKERFFVNR LFPIEEDLGVEIQYFDDMEDSVELLSQVVEKESPLGVDKTWPARFLLRLQELKAASSYVN GSVIVDKVRQIKDKDEQEKLIQSSLLNDAVMAELIPYVVKGHTEKELNAIARDLYKKHGA SDVSFDPITAYGRGAADPHHETDDTKGKRGDCVLLDIGGVLDNYISDMTRTVFLGEVSER HKEIYQIVRDANLRGIAMAKPGNRMCDVDLACRNYIEEKGFGKYFTHRTGHSAGIEDHEV GDVSSVNEEIIEVGQCFSVEPGIYIPEENTGVRVEDLVLITEDGCMVLNHYPKDLLIVKE DGTTEVAE >gi|333758476|gb|AFIH01000001.1| GENE 2294 2372934 - 2373956 1013 340 aa, chain - ## HITS:1 COG:TM0067 KEGG:ns NR:ns ## COG: TM0067 COG0524 # Protein_GI_number: 15642842 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Thermotoga maritima # 3 340 2 339 339 377 53.0 1e-104 MAKVVCFGEVMLRLQPYHYERFVQAENVQFTFGGAEANVAVSLANFGVDVSYVTKLPAHM IGQAAVNSLRRYGVDTGKIVRGGDRVGIYFNEKGASQRPSICTYDRAHSAISEAKKEDFD WESIFSGAEWFHFTGITPALSENVLEICREACQVAKKKGIKISCDVNYRSKLWTKEAARE AMTELSEYIDLILINEEDAKTVFGIQADKTDVHSGKLNKEGYEEVAKKLMEQFRFSEVAI TLRESKSASDNDWSGLLYDGKECLFSKVYPVHIVDRIGGGDSFAAGLIYSFLKGDDSRKA LEFAVAASALKHSIEGDYNMVTVPEVEKLAGGDSSGRVQR >gi|333758476|gb|AFIH01000001.1| GENE 2295 2374080 - 2374724 647 214 aa, chain - ## HITS:1 COG:HI0047 KEGG:ns NR:ns ## COG: HI0047 COG0800 # Protein_GI_number: 16272022 # Func_class: G Carbohydrate transport and metabolism # Function: 2-keto-3-deoxy-6-phosphogluconate aldolase # Organism: Haemophilus influenzae # 4 209 8 212 212 185 46.0 5e-47 MDSIAERISEVGIVPVIKLKNPERDAVNLGKSLCKGGVPIGEVTFRAEGADTALRLMSAA IPEMLLGAGTVTTTEQIDRAVDNGAKFIVCPGFDEELIQYAQEKNVPIYPGVSCASEYHK ALKYDLKVLKFFPAEQLGGLAMIKALAGPFPMFKIMPTGGISLKNLGEYSASPLICACGG SYMVKDKMIEEGAWDEITRLCEESVAIIKEARNA >gi|333758476|gb|AFIH01000001.1| GENE 2296 2375154 - 2376284 941 376 aa, chain + ## HITS:1 COG:MT1128 KEGG:ns NR:ns ## COG: MT1128 COG0726 # Protein_GI_number: 15840535 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Mycobacterium tuberculosis CDC1551 # 176 371 49 241 291 162 41.0 1e-39 MKGYAEENTGHRLKSYYSLQYKGLGFSAYSNDGQRQSRTDSYPTAMKVLLKHQPEGLSGT VQYQANISGSGWSSVFENGQVVGDGQEMPLEGIRIFLNGDLASQYDVYYRTSVLGEWQNW AKNGEDSNPVGVGKHIDGIVVTVVKKGENPQEEQAAVNPEKAVSTEGNVDPKKPMVALTF DDGPGNYEDRILAVLQKYNAKATFFYVGTQAEKYPSTVKRMADAGMEIGNHSYKHENLPK LSEAGIETSLSKTNSILRKLSGQSVSLVRPPYGATGGSVKSALASTGQPSILWSIDTLDW KTKNTHNTVNVVLTQVKDGDVILMHSIYKQTAEAAEQIVPALKERGYQLVTVSELAKARG VSLQAGKNYSSFRKKK >gi|333758476|gb|AFIH01000001.1| GENE 2297 2376358 - 2377389 931 343 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 10 337 2 328 329 363 53 2e-98 MEKSEMKDFTPIVHNEENILEVNGLKKYFPIKGGFFNTVVGQVKAIDGISFHIKRGTTMG LVGESGCGKTTTGRAILRLGGEKTAGQVLFNGREVYDIPKNEMNEMRTKMQIIFQDPFSS LSPRLPVGEIIGEAVKEHKLVPMNEYEEYIDKIMDECGLQPFHKGRYPHEFSGGQRQRIC IARALALNPEFVVCDEPVSALDVSIQAQVINLLEDLQEKFKLTYLFISHDLSVVEHISDT VGVMYLGNIVEFGDTKDLFANPLHPYTKALFSAIPIPDPEAKMSRIILEGSIPSPANPPS GCKFHTRCKECMEICKNKVPEKKDMGNGHIVYCHLYDDVKGEE >gi|333758476|gb|AFIH01000001.1| GENE 2298 2377466 - 2378605 553 379 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 60 375 27 329 329 217 38 2e-54 MARNDGYLSAKESRRISKENKAITSKLEKKRTRRNVPESEYLTEMKNPANAVEFENLHTF FFTDAGTVKSVDSVSFDVPLGKTVGVVGESGCGKSVTSLSLMQLLQRPQGQVVEGSIRLN TGEKVYEITKTPEHIMQHLRGNFMSMIFQEPMTSLNPVFRIGDQVDEVLLFHENEYNTKE AIKKRTIELLEMVGIANSEGVYKMYPHELSGGMRQRVMIAMALACNPKLIIADEPTTALD VTIQAQILDLLRGLKDKINSSIMLITHDLGVIAEMADYVVVMYSGRVVEAGTAKEIFAHP AHPYTIGLMASKPVVGREVDKLYSIPGKVPNPINMPNYCYFRDRCDKRKPCCDGLYPGEI WLSETHRVSCYLYDEAQKD >gi|333758476|gb|AFIH01000001.1| GENE 2299 2378621 - 2380294 1545 557 aa, chain - ## HITS:1 COG:CAC0178 KEGG:ns NR:ns ## COG: CAC0178 COG1173 # Protein_GI_number: 15893471 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Clostridium acetobutylicum # 323 557 67 301 301 269 52.0 8e-72 MSEMEKNTVDESTMSAGTADEKAVVKDAVVEQKVEEAVTADSRIDESTAEKEQSKAEYSL NDDRRVKTLSPGAMVAKRFFRNRIAVFGMIILLAMFLFSFLGGAISPYKESQLFYRKDVQ SQKYAGVKVNTELRYQQAEKDAFPALAQAQFVLAKGKKQTEFSAGDKTYNYEEAGKDFYI ISVKGSATPVAFAAVDLVTAAGAETPSFNEQLNILKAYSNKESSFTLDGVNYTISDDGTV EKDGTVYATAGRYVINTIMSDIQLSKEFKEKLLSEIQADSKSFTYQDADGKESVYNIEYD APSKAYNIRQTREQMVYDTYSSPSKAHPLGTDKNGMDMLTRLMYGGRVSLYIGFVVVIIE TLIGMIMGGISGYFGGWIDNLIMRVVDVFYCIPTIPIYIIIGAAMDAMRVDPKLRMFYLM IILGFFGWPSITRLVRGQILTLREQEFMTATEATGIKPVHRIFRHLLPNVIPQLIVTCTM SLGGVILTEAVLSFLGLGVKFPFASWGNIINDVNNTYVLSNYLFIWVPAGVCLLLTVLAF NLVGDGLRDAFDPKMKR >gi|333758476|gb|AFIH01000001.1| GENE 2300 2380309 - 2381295 1017 328 aa, chain - ## HITS:1 COG:CAC0177 KEGG:ns NR:ns ## COG: CAC0177 COG0601 # Protein_GI_number: 15893470 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Clostridium acetobutylicum # 1 327 1 320 322 226 40.0 4e-59 MKKYIIKRLLWSVLILFIVAFLLYILMRSLPTSYLEQIARQKSQQPGSKTFEEWMQQLEA TYGMDKGIVPGFFAWLSKAVRGDFGDSWKYTVPVTRKFTEVVGISFWMGLIVMVLEMLIS IPLGIIAATKQYSATDNAISILALAGISLPTFFTASLLKLIFSVKLGWFDLNGLVGRNYD FLSPMGQRMDVAMHLVLPIITLLIASIGAYMRYIRTNMLEVLSSDYIRTARAKGLSERRV IYHHAFRNTLITLVTIWGTSLPGLFSGAMITEQLFSIPGIGYTSYQAMISGDIPFSMFYL VFIAALTLVGNLITDILYAVVDPRVRIA >gi|333758476|gb|AFIH01000001.1| GENE 2301 2381434 - 2383755 2417 773 aa, chain - ## HITS:1 COG:CAC0176 KEGG:ns NR:ns ## COG: CAC0176 COG0747 # Protein_GI_number: 15893469 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Clostridium acetobutylicum # 3 185 1 175 569 76 29.0 2e-13 MKMRKKVIASLLAAVMATSLLAGCSKGTAEKKTDDQKTDQKKAGDTKADASGAMVFATDD FNAKFSPFFADTVPDQTINDLVSVGLLTMDRSGAMVYKGIEGEKREYNGKEYTYNGISDL TVTENSDGTVYYDFTMKDGLKFSDGEPLTVDDVIFSMYVYADPTYDGNASFFSLPIQGMK EYRSGVDTLFNLILAAGEENKDFSKWTEEQQKTFWTDYKSAVDAFVKEIVDLCVSNGSNK EGDSIAACAANYGYEGLKEDATAMDFFNAMLAKYDGSVTKMSSAESAGTQFADLMPSYKE FSVGVETGESAPNISGIQKTGENTLRVIATKVDAQMIYQVGGINVAPLHYYGDKAQFDVE KNQFGFPKGDLSMMREKISKPLGAGFYVFEKYENGVISFTANENYYDGAPKVKNLRVNYV TEADRLNSILAGTVDIATPSFTTEVADAIKKANSNGELSGDKIHTVAVDALGYGYIGINT HNVSVNKEPGSDASKNLRRAFATIFSVYRDLAISTYYGDRASVINYPISNTSWAAPQPTD DGYEIAFSKDAQGNPIYTSGMSDEDKYAAAKKAALGFFEAAGYTVENGKVTAAPEGAKME YEVMIGGGGNGDHPSFMILTEAKKALADIGITLTVNDLSNTSDLWNKLQARQAEMWCAAW NSTPDPDMYQVYYSDVANGGKEPGGSNYMYQIEDPKLDEMIMQARESTDQEYRKTMYRAC LNDIVDWACEVPIYQRQEVTTFSSQRINIDTITPDMTSFYKWFAEIQNYQLAK >gi|333758476|gb|AFIH01000001.1| GENE 2302 2383850 - 2384260 206 136 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227871772|ref|ZP_03990177.1| ## NR: gi|227871772|ref|ZP_03990177.1| hypothetical protein HMPREF6123_0116 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_0116 [Oribacterium sinus F0268] # 1 136 53 174 182 65 33.0 1e-09 MLLPGFFAKAALSRIAYLMLPYAMEAVAVVLTTVSFFCFLYLSRGGKVRREDGSFAEGAI DGGNYRKYFQNLQGRAAVSCILGIGFLLIEIFYLLLAKEEKNYGLEFGILLIQLGFIVFS RVFWLNLSRVIRNWTL >gi|333758476|gb|AFIH01000001.1| GENE 2303 2384260 - 2384415 112 51 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGMFQSPYDRGGVLSKEAIEERKKIYRDRRSPEIRKKKIFAFFFIFFRFFL >gi|333758476|gb|AFIH01000001.1| GENE 2304 2384415 - 2386118 1939 567 aa, chain - ## HITS:1 COG:FN1145 KEGG:ns NR:ns ## COG: FN1145 COG1164 # Protein_GI_number: 19704480 # Func_class: E Amino acid transport and metabolism # Function: Oligoendopeptidase F # Organism: Fusobacterium nucleatum # 1 550 1 546 559 416 42.0 1e-116 MKFKEMQYERISVEKIAEETKALIEELKAAKSFSEAEEVFLRMEAMQGHVDTMSTLTHIR HSINTEDKFYDEEENYWNNAYPKIQEYGQEWIKALLASPFKEDFEKKYGSIMFVNAEMTL KTFSPEIIPDLQKENELVTAYEKLLASAQIPFEGKVYTLSQITPFKNDKDDARRLSAWKA EGQWYKDNQQELDRLYDELVKLRDGMGKKLGYKDFTELGYYRMKRNCYKKQDVEKFREAV QKYLVPLAAKIYERQAERLGKSYPLSYADAAIEFRSGNPKPAGNPDEIVEAGKKFYDWLS PETSEFFNHMIQDELMDLLSTKGKQGGGYCTSIMDYKTPFIFANFNDTQHDIEVITHEAG HAFAAYINRNRVPAETIWPGMEACEVHSMSMEFFAEAFSEEFFGKDARKYNYSHLAGALT FIPYGTMVDHFQHIVYENPHLSPAERHAEWKKLVKIYQPWLKLDGEIPFYSEGEGWQRQH HIYSMPFYYIDYCLAQTVALEFWNKIQKDQKDAWKHYMDYTKQGGSVVFTELLKNAGMES PFEESCLRGICETAAKYLSDYDLTGIE >gi|333758476|gb|AFIH01000001.1| GENE 2305 2386530 - 2387495 1300 321 aa, chain - ## HITS:1 COG:HI0824 KEGG:ns NR:ns ## COG: HI0824 COG4211 # Protein_GI_number: 16272765 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type glucose/galactose transport system, permease component # Organism: Haemophilus influenzae # 15 321 36 336 336 196 42.0 5e-50 MFILVIYTGLTSKNFLTPDNGLNLLANMSYRLVIALGIAGCVITAGCDLSAGRMIGFGAC IAGTLLQKVENSGRFFAQPQWEHFGNGILLKITPMNPFLVLLLVMVVCAVFGTVTGWFIA YLSVPPFIATLAMMEIIYGLGLLFTNATPLGGYIEGYTVFSTGKFLGLSYLIWMALIMAG ITWFIFNMTRHGKYMYAIGGNPQAAEVAGVPVNMTLVLIYAKAAAFYGMAGYMLGAKAGG ASVNTGLGYEMEAIAACALGGVSVTGGRGKVSSAIIGVAVLELLKTALQYLGVNANAQYI AIGIVIFIAASLDIRKYLTKK >gi|333758476|gb|AFIH01000001.1| GENE 2306 2387570 - 2389078 1569 502 aa, chain - ## HITS:1 COG:HI0823 KEGG:ns NR:ns ## COG: HI0823 COG1129 # Protein_GI_number: 16272764 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, ATPase component # Organism: Haemophilus influenzae # 6 502 14 505 506 501 51.0 1e-141 MTEFKLEMKNISKSFPGVKALDNVQLSVRPGTVHALMGENGAGKSTLMKCLFGIYKMDQG EIFLDGKKVEINNPDEAMEHGVAMVHQELQPVLARSVSENMYLGRFPVHKFGPLQVIDHG KMHRETKKWLSELGLDYNVKAPLSSLSIGQMQMVEIAKAVSHDAKVIIFDEPTSSLSDKE VEFLFKVMGDLKKKGVSMIYISHKMDEIKRISDDISIMRDGTYVGTWRAEDMTTEQIIAK MVGRELTNIYPEHRHEIGETIMEVEDYTSIHDKSFRGITFSIKKGEILGFGGLVGAQRTE LMEGIFGIRHITKGKLKVHGKEVRVRRPKDAMNNGIGMITEDRRGNGIFGCLSIKDNVGV SIYNKFLKAGIMLDHPAINKVVNDNIKRLSIKTPGMKEQIGNLSGGNQQKVIISRWLAKD PDILIMDEPTRGIDIGAKHEIYEIMEELAKQGKAIIMISSEMPELLGMADRICVMCNGKL TGELNNKEEMTQENVMNFATMF >gi|333758476|gb|AFIH01000001.1| GENE 2307 2389153 - 2390265 1214 370 aa, chain - ## HITS:1 COG:YPO1507 KEGG:ns NR:ns ## COG: YPO1507 COG1879 # Protein_GI_number: 16121780 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Yersinia pestis # 40 344 7 303 335 161 35.0 2e-39 MKKILSVLTVSAMAVSMLAACGNSGSTATTTKAAEDAKETTAAADKAMAETKAAVEAMSG DFSDKKVGICIYQFSDNFMSLFHNELVSYLVSKGFKEENIKVVDGANDQATQTNQIQNFI TDKVDVLIVNPVNSSSAATITDMVQSAGIPLVYINREPSKDEEKRWEDNKWNVCYVGCDA RQSGTFQGEIIRDIGMDKLDMNGNGKVDYIMIKGDPENIDAQYRTEYSVKALQDKGMEVN KLDEQVGNWDQAQAQSLVANALAKNGKDIEVVFCNNDAMALGALQAIQAAGRTVGKDIYL VGVDALSEACQNVLAGTQTGTVFNDFLTQSHSAGDAAINYLAGKENEHYIKCDYVKVTAE NAKDILALLK >gi|333758476|gb|AFIH01000001.1| GENE 2308 2390405 - 2391472 937 355 aa, chain - ## HITS:1 COG:TM0585 KEGG:ns NR:ns ## COG: TM0585 COG0673 # Protein_GI_number: 15643351 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Thermotoga maritima # 3 349 2 354 360 174 31.0 3e-43 MDKLKLAIVGCGRISDCYRDVFQKLSDSVSVVYAVDKDIEKAKNFAADFSCRYTDCYEDI LEEELDVIHLCLPHYLHKPYSVLALEHGKHVLTEKPMAMSLQEADEMLEAEKRSGKLLGC IFQTRYNESVSILKRRLEEGIYGKLLTASSILTWNRPDSYYTGSDWKGTWEYEGGGTIID QAIHSIDRVRYIVASDVEWVEASIFNRTHPKLFVEDTAEAQIQFQNGVKYHLFATNTNGF DTPIQIEFCGEKGRCGLIQDMGYSYLGEKYEEFREVKKSVTVGKDYWGSTHIMQLEDFYR AVREGGKPLVDGVEGRKTLELVKAIYLSAKYRKRIYLPFTDEKLTKEEMGKILFY >gi|333758476|gb|AFIH01000001.1| GENE 2309 2391531 - 2392766 815 411 aa, chain - ## HITS:1 COG:BMEII0106 KEGG:ns NR:ns ## COG: BMEII0106 COG1940 # Protein_GI_number: 17988450 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Brucella melitensis # 28 361 19 331 374 88 25.0 3e-17 MQQIKQIDIREQNLKNVYDYVLHSSGASRAKIAKALGLSRPSSSSLVDELLSMGALFEDG KEEGERGVGRTPIVIRADFRRHFCIVLFWKPKRISASVVSMAQDKSGAERVLESLECPVS SAKEYGKRSLSLLSDFKNKYEKVYGKDKYLGSVLVLPGIVDPLRRAVLSHPLGIDLETGR RIISEIEESGENSVGILNDNAILGYAAMQRLNLQEKNFLYINLSTGIGAAYFMKGEIFGD AGGKLTQFGHIIVHPGGSLCSCGSRGCLEAEIGEHALQEQFASYFGKEELKPLLEGELLR KIIDGRKKAEGVYTAVKEKFLKDLSLAISNVSTMVFPDLILLGGFFSLWGEDFLEELKAE INRIGFSYIMQDLHLLYSKEEKEELQAAAADYFFSRYFHFTERKIEGIHLG >gi|333758476|gb|AFIH01000001.1| GENE 2310 2392797 - 2393630 856 277 aa, chain - ## HITS:1 COG:no KEGG:Closa_0336 NR:ns ## KEGG: Closa_0336 # Name: not_defined # Def: Xylose isomerase domain protein TIM barrel # Organism: C.saccharolyticum # Pathway: not_defined # 1 275 1 278 279 321 54.0 2e-86 MNIGCIVRLERDPDIEKEMKNLAGLGLHSCQVVSWDRKFFNTEKNAKRVKDAAESLGITI TAFWCGWEGPAFWNFTEGPITLGLVPEAYRMERLQTLKEGSYFAKDLGVSDLITHVGFLP ENRHDPLYAGTLAALKDLMKVCEANRQYFLFETGQETPITLMRMIQDIGSDYLGINLDPA NLLLYGKANPVDAVDIFGKKIRGVHGKDGLYPTCPGELGRETKIGDGKVDYPVFLKKLFQ LGYQGDITIEREISGEEQIRDILFAKQYLSDLIGKLE >gi|333758476|gb|AFIH01000001.1| GENE 2311 2393649 - 2394479 707 276 aa, chain - ## HITS:1 COG:PM1760 KEGG:ns NR:ns ## COG: PM1760 COG0395 # Protein_GI_number: 15603625 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Pasteurella multocida # 15 275 18 277 277 112 30.0 7e-25 MKKAILGKGIFAITIVLSLFWLMPLIFIFMNSFKGDAEIINHFLALPKEWTLQYYVATWN KFNFPLLLKNTIFYTVTTTVMVLLFAPMASYFIARSRHMLVCRISLLLMILPIMVPFQTY MISLTKFLGGFHLIGTRLGYISVTVGLLLPLAVYIIYNYINTIPMTLEESAYIDGANIFQ CYFYIILPLLRPILTTVLVLDALSTWNDVITNQLIVGTKMSSMNIQNALYMFFSVQSTDW SHALPGTMMSIIPSLLFFLVMQKYIVTGITAGAVKG >gi|333758476|gb|AFIH01000001.1| GENE 2312 2394476 - 2395360 852 294 aa, chain - ## HITS:1 COG:SMb20232 KEGG:ns NR:ns ## COG: SMb20232 COG1175 # Protein_GI_number: 16263971 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Sinorhizobium meliloti # 9 288 24 306 314 150 33.0 4e-36 MGSIHRGRKQYLYFILFVLPALFFVLLATDIPFVLNMVYSLFEWNGISKSATFVGLQNFV KVFHDKLFWKSFLFTMRYTVYYVILVNILSLFVALQLWKNTFASKVGRTLYYVPHIISLT AISLVWQFILGPIFSGFYDITGIPFFHYSWLGRPKLTFIIILVMTIWQNIGFYMVNYIAG IITIPRELVEAAVIDGANSKQCFMKVMLPLMVPSLSICILLSMMFGLKLFDIIMVFTQGG PVNSTISVSFNIYKEAFSANHYGLATAKSLFFVAVVLCITGVLFQLRKKWEVEM >gi|333758476|gb|AFIH01000001.1| GENE 2313 2395452 - 2396768 1514 438 aa, chain - ## HITS:1 COG:BH3845 KEGG:ns NR:ns ## COG: BH3845 COG1653 # Protein_GI_number: 15616407 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Bacillus halodurans # 1 392 2 392 436 90 27.0 4e-18 MKKMTAMLMVASLTAAALCSCGQKTEKETPAGAETSKETQKAEEKKDGQKDGQEVTLKVY DSMAYGVEAYDEVIKKFEENHPGVKVEIQHAANDSNTLLQSRFNSGDIPDVFLNEPGAGA QLYYEYSYDWSKDTETLGKFKEDALDLTKTEDGAIYGLPWTYETMALIYNKDVFDKAGIT TLPNSVEELGEICKKLQDSGVKPLAIAGKEKWALGQMATHFIMDKSLDAAGTVKALKSGE KSFKDLPHWDNFFKLLDLVKEYDGDKAIETGWEPAENAVATGEAAMLHMGDWAQANFTKM GPDTKLAFLPVPVGSSEADNTILSSVGWVFQVYKDSPNLDLAKEYCEYVLCSEEGAKWMT EGVDAVPASTTSDLQPSGDLPQDAQKYIKAGKTNGWIHTICDTTYSDTVGPLIQGYILGE YTKEEVTQGFEDYFKNLQ >gi|333758476|gb|AFIH01000001.1| GENE 2314 2396822 - 2397835 939 337 aa, chain - ## HITS:1 COG:BH2165 KEGG:ns NR:ns ## COG: BH2165 COG0673 # Protein_GI_number: 15614728 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Bacillus halodurans # 1 203 6 207 348 88 28.0 1e-17 MKIGFIGVGGMGYTHLLCLKEIAGTEEICVSAIADKRKERREMAEKVFPEAKLYTDGLEL LEKEELDTVFIITPSYEHFPLMKKAMEKKLSIFCEKPVCLSPEDCDQLVKMEAEYEKPIC IGQVVRHMPEFLFLKECIDSGKYGKLLDLSFERLSGNVNWGYEDWFHDEKKSGSVILDLH IHDLDFMRFILGEPDSAEVLHHTSFSDGMVNHIVTKAKYPDLEVLCEAAWYHADSYPFHA SYRADFEKATVQFHSAIDKEHVFLCTDGKAEKKKIGGEDKEIESEMNIKSLGAYLIEDRK FIAYLLGKSTENPVSLADAVESVRLGIQILTQTKGAC >gi|333758476|gb|AFIH01000001.1| GENE 2315 2397954 - 2399393 1096 479 aa, chain - ## HITS:1 COG:TVN0757 KEGG:ns NR:ns ## COG: TVN0757 COG0285 # Protein_GI_number: 13541588 # Func_class: H Coenzyme transport and metabolism # Function: Folylpolyglutamate synthase # Organism: Thermoplasma volcanium # 51 413 42 354 428 130 28.0 5e-30 MNRKEAEDFVYSSYLRAEKYHGYEEKDVERRHPEFTRELLRKKFGTPAAIVTGSKGKGSV SKMIAEILQTKFTIGLMTSPHIEDFCERFQVNGEKVSSPLFSMLMEEIRPEIEEIDRKIP KEFCVSPMGIQADFALTWFRSRKTDFNVFECGKGAKLDDVNNILHDYAVINSVFLEHRRE LGNTIAEIAEDKAHVITGREKAVFVGEQTEEAMAVIEKRAALFSVPLKVYGRDFWEENLR TEQTGIVFDLYVFGKRYRDIRLPLLGDFQAKNCALAMAVSETVFSDLSEKASVVEESMPN TENLPSAESLPNTESSHSAMLPESPERGRTLEIEAVRKRLSKINWPGRLELISGEPFILL DCCINRVSTKAVKAVLTERKIEKPVSIIAIPEDKDYRGVVQEMHPLSESVILTRTNNPHY HFSEKQCERIAEEGIATEWAENFTEAMKKAEEKGLPIVILGTTSLLPEVKNWKKRIKNS >gi|333758476|gb|AFIH01000001.1| GENE 2316 2399500 - 2401623 1473 707 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|300813252|ref|ZP_07093614.1| ## NR: gi|300813252|ref|ZP_07093614.1| hypothetical protein HMPREF9131_0589 [Peptoniphilus sp. oral taxon 836 str. F0141] hypothetical protein HMPREF9131_0589 [Peptoniphilus sp. oral taxon 836 str. F0141] # 126 406 60 370 531 114 28.0 3e-23 MSKKHFQTINRIWEQKKIGLRLRAEGNPVEAGFLVRLEDSGEKRFDFVRRAIRYSLEYSL KRNGRKILLKESRETLSEAPAFQALSSFQLYFNPSLEEECEEEDFLPEISSDTEIQGRGE SALSGNTEALFYKAVEELEQLLLHLDWSAEKIEVYRLWQSRTHKPQDKIEIKGECFSCNA LVNISSYGRGSEKVRLRLPKEDFALGFTSSYAGDGAGGIGEMIFLTNRLIEQLFGEKWDK ERLGYAPVIVYEYAREDYAIGLPLADKLDGIFLSSLLAESKKDEAKFYDYMVFNRYTDSR LHLDFTKADYGDKGRVKERKVMLPRYYKRLLGYLDFPLKMIREEEFLVLREKLHPKEREA FDACYQAIPGELFYRIRDSYEGEQFEVSNFVEDLLHPGKKDSSIIRRIIHAILQKDTEEK EAYPKLFGGHSIEEEFDPYLQKGSKEEESFFGLKMKKSLIPRITEKTPDMEERLKKIRIS LEEVLEFALRQGLAFPERKAEEETHEILKNKIYAGFAEGRLDVFDRVDLLKTLRCPDAEK EERKSLKTSAGARFNSLLNFAIGKADYLLKAEWSSETDDRNNVARLNSNMMNLLGVSEND KIVIHFGKKQAVLRVLDKDTLSDYQIGIPAPTRKSLGMNSINDIVTVHRDMMHIFLRHSE EQTIAFLGTFLAVFQVISNLWLGTLLCIVLVPAILYLVLNEERIKVK >gi|333758476|gb|AFIH01000001.1| GENE 2317 2401793 - 2402359 369 188 aa, chain - ## HITS:1 COG:no KEGG:DSY4458 NR:ns ## KEGG: DSY4458 # Name: not_defined # Def: hypothetical protein # Organism: D.hafniense # Pathway: not_defined # 39 157 14 125 213 97 43.0 2e-19 MPNSENMEVDCKRIEELEKVFSANHYNGSGNTAFRIEEGSVPIMLSAPHAVNHFRDGKLK AADCYTGGIARYLRELTGCSIIYSASFTETDPNYDSPKAGGYKESLKAYLKTHPVYLLMD LHGAAREREFAVEMGTAPRKRKEDASLLQYPFVDDVIKAILEEKFLFLNTEKKNISKNVF LPQKIKIR >gi|333758476|gb|AFIH01000001.1| GENE 2318 2402379 - 2404286 1702 635 aa, chain - ## HITS:1 COG:BH3718 KEGG:ns NR:ns ## COG: BH3718 COG1086 # Protein_GI_number: 15616280 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate sugar epimerases # Organism: Bacillus halodurans # 53 624 57 590 608 438 43.0 1e-122 MIYDALALGLSYFIALWLRFDLRYSMIDTVYVEAWKNFLPFHVIFSLLVFWYLKLYKSIW RFASYSELLRVSIATFISAVFHIVGITLLHRRMPISYYIIGALLQYLAVLGIRFSYRFIL LIRKIKAKQVNSRIMVIGAGAAGQMLIRDIHRAGEVDGEVVCIIDDNQNKWGRMIDNIPV VGGRESILEMVEKFSIDKIFLAIPSATPSQRRDILSICNETSCELKNLPGMYQLVLGQVT ASAMRQVSVEDLLGREPIQADLQEVFRFINGKTVLVTGGGGSIGSELCRQIAGHNPKELI IFDIYENNAYSIQLELRENFPELKLTVLIGSVRDSRRIFQVFAKYHPDIVYHAAAHKHVP LMEDSPCESIKNNVLGTYKTAYAAMTHGCKRFVLISTDKAVNPANIMGASKRVCEMIIQA FDKKIKEGKAEEIPQLYTHKGMENADKEGDGTVFQNIHTEFVAVRFGNVLGSNGSVIPIF KKQIEKGGPVTVTHPDIIRYFMTIPEAVSLVLEAGRFAKGGEIFVLDMGSPVKIDSLARN LIRLSGFKPDIDIKIQYSGLRPGEKLYEEKLMAEEGLEETENSRIHIGKPLQFDIEAFLT KIDGLMDVAYKNKEEDIREIVKEIVGTYKPAEEHA >gi|333758476|gb|AFIH01000001.1| GENE 2319 2404512 - 2405015 630 167 aa, chain - ## HITS:1 COG:no KEGG:Closa_0499 NR:ns ## KEGG: Closa_0499 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 50 145 42 138 191 67 38.0 2e-10 MKRVYGNIVKRNSVYIAIALLAFSGLSACKPKYGVNETPVMTTAAAEVEIPMDFDQIHND VLESVSPSDYPFVKNLNISGDNSAKTVNVEVEIVENVSTEALNTFLNEVMKTIANEAAIQ DFRYSKSTDTEYGSFFKKYSVHYIVKQGEETVEDVTVDPGEAFPFSA >gi|333758476|gb|AFIH01000001.1| GENE 2320 2405159 - 2407792 2752 877 aa, chain - ## HITS:1 COG:BMEI1436 KEGG:ns NR:ns ## COG: BMEI1436 COG0574 # Protein_GI_number: 17987719 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate synthase/pyruvate phosphate dikinase # Organism: Brucella melitensis # 4 862 46 917 930 995 56.0 0 MARKWVYLFTEGDASMRELLGGKGANLAEMTNIGLPVPQGFTITTEACTQYYEDGREINA EIMGQIEEHIKKMEEITGKKFGDHENPLLVSVRSGARASMPGMMDTILNLGLNEDVVRVI AEKSGNPRWAWDCYRRFIQMYSDVVMEVGKKYFEELIDKMKEKKGVKQDVELSAEDLHEL AEQFKAEYKEKIGKDFPTNPKEQLFGAIKAVFRSWDNPRANVYRRDNDIPYSWGTAVNVQ SMAFGNMGDDCGTGVAFTRDPATGNKGLFGEFLTNAQGEDVVAGVRTPMHINEMEQKFPE AFKQFTEVCSTLEKHYRDMQDMEFTVEHGKLYMLQTRNGKRTAQAALKIACDLVDEGMRT EEEAVAMIDPRNLDTLLHPQFDQKALKAATPLGKGLGASPGAACGKVVFSADDAEAWAAR GEKVVLVRLETSPEDITGMKVAQGILTVRGGMTSHAAVVARGMGTCCVAGLGDIVMDEAN KKFTLGGKTFHEGDAISIDGTTGNVYEGIIPTVDASIAGEFGRIMGWADKYRKLAVRTNA DTPQDAKKARELGAEGIGLCRTEHMFFDPERIFAFREMIVSDTKEEREEALEKILPFQQG DFEALYEALEGNPVTIRFLDPPLHEFVPQEEEEIEKLAKAKNKTVQEIKDIITSLHEFNP MMGHRGLRLAVTYPEIAVMQTKAVIRAAINVQKKHPDWKLEPEIMIPLTSEVKEFNVVKK VVVETAEEEIKKAGVKLAYQVGTMIEIPRACLTADEIAKEADFFCFGTNDLTQMTFGFSR DDAGKFLNAYYDNKIFESDPFAKLDQVGVGKLMKMAIDLGRPVNPHLHVGICGEHGGDPS SVEFCHNIGLDYVSCSPFRVPVARLAAAQAEIKNPRK >gi|333758476|gb|AFIH01000001.1| GENE 2321 2408053 - 2408754 752 233 aa, chain - ## HITS:1 COG:CAC0321 KEGG:ns NR:ns ## COG: CAC0321 COG0745 # Protein_GI_number: 15893613 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 5 233 2 230 230 278 63.0 8e-75 MEEKQKILIVEDEESIAELERDYLELSGFLVDTEKDGEKGLQRALASDYDLLILDIMLPG RDGFSVTQELRAKKDIPILLVSARRDDIDKIRGLGLGADDYMTKPFSASELVARVKAHLA RYKRLRDNGKEENAIIEIRGLRIDTTARRVFVDGKEVTFTSREFDLLAFLAAHPNRVFTK EELFQEIWKMESIGDIATVTVHIKKLREKIEMSNAVKPQYIETIWGVGYRFKA >gi|333758476|gb|AFIH01000001.1| GENE 2322 2408763 - 2409866 937 367 aa, chain - ## HITS:1 COG:CAC0317 KEGG:ns NR:ns ## COG: CAC0317 COG0642 # Protein_GI_number: 15893609 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 29 361 161 492 498 256 42.0 5e-68 MVKLNRFYAVRTEYRFERERRDNEKPWLDGKSGGEFLCQYHSADFSFFLSTHGITSMGQN IFILALAGIFLVAWIYNGIVKPIDSLKNAARRIESGDLNFTLEAESHDEFAELTQAFEKM RMKLKQNQEEKARDEEENRELVSNIAHDLKTPITAIRGYAEGILDGVAATEEKKRKYLQT IYHKAVEMNRLIDELNYYAKIETNKIPYHFVHLPALEYFQDYGMEMAIDLDAIGFQLTTD YYVEDTVEVIADPVQLRKVLNNIVSNAVKYMDKAEPKIHFSLLDAGDFVEVVIEDNGKGI EKKDLPYIFERFYRSDTARSTETGGSGIGLSIVKKIIEDSGGRIWADSEIGVGTGIHFVL RKHFMEG >gi|333758476|gb|AFIH01000001.1| GENE 2323 2409931 - 2411052 1096 373 aa, chain - ## HITS:1 COG:glf KEGG:ns NR:ns ## COG: glf COG0562 # Protein_GI_number: 16129976 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-galactopyranose mutase # Organism: Escherichia coli K12 # 5 372 3 364 367 441 57.0 1e-123 MEELDYLVVGAGLFGAVFAHEAASLGKKVLVIDKRDHVGGNVYSYEKNGIMVHHYGAHIF HTNNTKVWNYVNRFADFNRFTNSPVANYRGKIYSLPFNMYTFNTMWGVITPEEAEKKIEE ERRAAGIGEPKNLEEQAISLVGREIYEKLIKGYTKKQWGRDCKDLPASIIRRLPVRFTYD NNYFNALYQGIPVEGYTAMVEKMLEGIPVELSVDFLEKKEEWMRKAKKVIFTGAIDAYYD YCLGELEYRKVRFEVEELPIPNFQGNAAVNYTDEESPYTRIIEHKWFTFGKDREGKDIPT TIISKEYSAEWKRGEEPYYPVNDEKNQALFAEYQALAKKEEKLLFGGRLGEYKYYDMDAV IAAALQFSENTLR >gi|333758476|gb|AFIH01000001.1| GENE 2324 2411097 - 2411546 413 149 aa, chain - ## HITS:1 COG:VCA1005 KEGG:ns NR:ns ## COG: VCA1005 COG1846 # Protein_GI_number: 15601758 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Vibrio cholerae # 8 144 16 152 152 135 51.0 3e-32 MQEEYKELRLENQLCFPLYACAKEVTRRYKPFLDPLDLTYTQYITMMVMWEKKEVRVKDL GEVLYLDSGTLTPLLKRLEQKGLITRARYRDDERALCVHITEEGEKLQEKAKSVPHSMRA CIPLSLEEIGILKKLLSRTLHAMENPEIV >gi|333758476|gb|AFIH01000001.1| GENE 2325 2411587 - 2412501 557 304 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 1 302 1 306 306 219 41 5e-55 MFDLIIVGAGTAGLSAAIYGVRAGKSVLVLEGAAYGGQIINTPEIENYPGIKKISGFEFA TNLYNQAKELGAEIRFEKVLSVQEKNGHKIVVTKDKEYEAKAVILATGAKNRNLGIEKEQ ELVGKGVSYCATCDGMFYRGKVVAVNGGGNTAVEDATFLSEYVEKVYVIHRRDSFRADKA EVDRLVAKKNVELVLNSTIKALESDASGLTGILVVDKDGKERRIQVDGLFVAIGQAPDNE AFRNEVDLDGKGYISAGEDCSTKTAGIFTAGDCRTKAVRQLATAASDGAVAALAAVNYIN GLAL >gi|333758476|gb|AFIH01000001.1| GENE 2326 2412674 - 2412982 510 102 aa, chain - ## HITS:1 COG:BMEI2022 KEGG:ns NR:ns ## COG: BMEI2022 COG0526 # Protein_GI_number: 17988305 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Brucella melitensis # 1 102 1 103 107 100 46.0 5e-22 MSAPSITGKEFEEKVLQSKEPVLVDFWASWCGPCQMLSPIIGEIAEEAKDFKVYAVNADE EQELMVRYGVRAIPTLIVFKDGQVYKQNTGFIPKDQVLDLLK >gi|333758476|gb|AFIH01000001.1| GENE 2327 2413206 - 2413751 448 181 aa, chain - ## HITS:1 COG:no KEGG:Closa_0675 NR:ns ## KEGG: Closa_0675 # Name: not_defined # Def: regulatory protein RecX # Organism: C.saccharolyticum # Pathway: not_defined # 22 174 52 195 202 70 32.0 4e-11 MKEWKEEITVRNPLERASLSTEEKLLQRCKERSLYLLSGTAKTERRLREKLVKSERYTED VIEKTIAFLKDYDYLNDYHYALRYLEENAGKRSLLDMKSKLFLRGVDSVSLERAIADFRE KQREEETNPEREALKKWIEKKSRSLDLSDRKDREKLLASLMRKGFSYSLIREMMDIEDFE S >gi|333758476|gb|AFIH01000001.1| GENE 2328 2413758 - 2414882 1420 374 aa, chain - ## HITS:1 COG:AGc3441 KEGG:ns NR:ns ## COG: AGc3441 COG0468 # Protein_GI_number: 15889174 # Func_class: L Replication, recombination and repair # Function: RecA/RadA recombinase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 18 351 68 400 416 428 65.0 1e-120 MAGKVSKAPVVALVDHEEKLKALDAALTKIEKDCGKGSIMKLGDAGVNKDIEVVPTGSLS VDIALGAGGFPRGRIIEIYGPESSGKTTLALHAVAEVQKRGGIAAFIDAEHALDPRYAEA IGVDIDNLYVSQPDSGEQALDIAETMVRSGAMDILVVDSVAALVPKAEIDGEMGDSHVGL QARLMSMALRKLTAIIAKSNCILIFINQLREKVGVMFGNPETTTGGRALKFYSSVRIDIR KGETIKAGEGEFSGNRVKVKIAKNKIAPPFKQVEFDISFGTGISKEGELLDLGAEKKLID KSGAWFAYQGNKIGQGRENAKDFLRKHPKLMAELEIALRKEYGLKEDPYLEAVLNAAEEE SPEERKTDTAGQEA >gi|333758476|gb|AFIH01000001.1| GENE 2329 2415450 - 2416799 389 449 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 11 439 1 420 447 154 27 2e-35 MSQEKSETVSMENIYRLDGRVPVAKAIPFGLQHVLAMFVANLTPMTIIAAAAKPALSQQE LAMLVQNAMFAAGIATMIQLYPVWKIGSKLPIVMGVSFTFVTILSTIGGQFGYPAVVGAV LVGGIFEGILGLLAKYWKKIISPIVAATVVTSIGFSLFTVGARSFGGGYAEDFGSATNLI IASITLATCILWSIFVKGYMKQLSVLAGLVVGYICAIAVGKVDYTLIFSKGLISLPHILP VMPVFNIGAILSTCIIFLVSATETIGDTTAMVVTGLNRDITEKEISGSLACDGFASSISA LFGCCPVTSFSQNVGLIAMTKVVNRFTIASGAAMMLLAGLLPPVGQFFSSLPQCVLGGCT IMMFGTIVVSGMQMVASCGFSQRNIVISSLSLAIGIGFTSTSEIEIWKIFPPIVQNVFGA NVVAVVFVVALLLNLILPKNMDIQKLSVE >gi|333758476|gb|AFIH01000001.1| GENE 2330 2416802 - 2417992 566 396 aa, chain - ## HITS:1 COG:lin0994 KEGG:ns NR:ns ## COG: lin0994 COG3594 # Protein_GI_number: 16800063 # Func_class: G Carbohydrate transport and metabolism # Function: Fucose 4-O-acetylase and related acetyltransferases # Organism: Listeria innocua # 22 236 3 204 343 67 29.0 4e-11 MLEKEQTEKQQTEKQQTEKQSKKKTQRIKELDSFKGFLIFIVVFGHFLLPLKESPYPLFS RSFYLIYSFHMPAFVFLSGYFGYSGWKKRGTNFRSLLSYVFLYLFMQGMLHICDIFFYGS TRIFPDFWHASSTPWYILALIFWNLALLPAELFLRRREGKEITAYLLFLILLSVPLSFLE VGRTLKDFLALDRSLSFAPFYYLGFLAKCYGFSFQKIYKLPATLGLLFSLSLFGFLPQLL PYTRVFYGTWGYRIEREAILPFFKTYPIVLRIAYIPFALCIAYFFFFLLRFLLEKGGGQR FSGAFPYGNREKPKKIESFLQKTGEYTLPIFVFHRPFRDAFFACGADRYFLEGGLSLWIV VLFYLFLIGFSLVLMKLLGRKALDAFCRFRLPEKRP >gi|333758476|gb|AFIH01000001.1| GENE 2331 2418041 - 2419729 2094 562 aa, chain - ## HITS:1 COG:CAC2337 KEGG:ns NR:ns ## COG: CAC2337 COG1109 # Protein_GI_number: 15895604 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Clostridium acetobutylicum # 2 553 1 562 575 456 41.0 1e-128 MLDYKKEYERWKEADLPDFDLRRELDSLSGKDDEIKEHFGRSLEFGTAGIRGTLGVGTNR MNIFVVRQATEGLARYILEEGLEKLVAISYDSRLKGWTFAKEVAQVLAANGIAVRLYDAL MPVPALSFATRYYHCSAGIMLTASHNPAVYNGYKAYGSDGCQMTDEAADKVYRKIQETDI LSGAKTMPFSKAVDQGLIRFVEEECKEAFYKAVLSQSVHPGVCKDAGLSLVYTPLNGTGL EPVTRIFKELGISDVTIVPEQEYPNGYFTTCPYPNPEILEAMEKGLALAKEKNADLLLAT DPDADRVGIAMRTEDGEYELVSGNEMGVLLLDYIAAGRIAEGTLPKDPVAVKSIVSTPLA DKVAADYGVELRHTLTGFKWIGEQIKFLEEKGEENRFIFGFEESYGYLSGTAVRDKDAVV ASMLICEMAAYYRKNGSSIKARLEEIYKKYGYYLNAVDSFSFPGLSGMDKMQGIMETLRK DCPKDFAGIPVKACTDYLESEKTGLPKSNVLLYSLENGESIIVRPSGTEPKIKAYYTTLG RTKDEAKAEKDKLAKALQPIFS >gi|333758476|gb|AFIH01000001.1| GENE 2332 2419773 - 2421116 1428 447 aa, chain - ## HITS:1 COG:TP0270 KEGG:ns NR:ns ## COG: TP0270 COG0617 # Protein_GI_number: 15639262 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA nucleotidyltransferase/poly(A) polymerase # Organism: Treponema pallidum # 15 436 20 470 478 196 32.0 6e-50 MPKGAEFIIRSLENAGFEAYIVGGCVRDGILGREPEDWDVTTNAKPMEVKSVFPVTVDTG IEHGTVTVLVPPDEVERGIRSFEVTTYRIDGEYTDHRHPNAVSFTGSLTEDLARRDFTIN AMAYHMERGIIDPFSGQEDLEKKIVRAVGRAEDRFREDALRMMRGIRFSAQLDFALDEEA FSGICKLKESLSKVSKERIAVELWKLLASAHPEKVERLFATGLAPYITEDFPKIALRGIP ELLPFAPKEKILRFGLFLRGVPEDARKILRDLKLDRDTIEGASHLAGLFAEEEVDTPYAL RKRIARYGKKMVRDFYEARKELLKRAKDSETEADAAKRDVTKGCATEGNATNGDATEDSP EKDLAVVEERLSWLRKIEEEGDCVCLSDLTLSGKDLIALGIAPGKKLGELLQYAFDHVLQ NPKENQREKLLLYLEKNTAILKDKVVE >gi|333758476|gb|AFIH01000001.1| GENE 2333 2421181 - 2422122 1075 313 aa, chain - ## HITS:1 COG:lin1865 KEGG:ns NR:ns ## COG: lin1865 COG1597 # Protein_GI_number: 16800931 # Func_class: I Lipid transport and metabolism; R General function prediction only # Function: Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase # Organism: Listeria innocua # 1 289 1 277 310 137 31.0 4e-32 MGKNVLLLVNSKSGQEKGKTFLYNIVEEFAKKNCVVTVFPILPKSKKLNTEAIVEKYKDR FDLIVCVGGDGTLHYLVNSLMREDLSVPVGYIPTGSTNDFANSLGIPKDLKENIEGIVRG EPFYCDIGKLNGQYFNYIAAFGAFTKVSYGTDQGLKNNLGHMAYLLESIRTMPESLSKSY SLKISSEESHFSGEYIFGAIFNSRSVGGFTGFPGGTIEERLAVDLQDGEFEVLLIHKPKN IADYGEILSTIVGGDIPENNPLVQFFKVKSLEIQAEEDLEWTLDGEFGGAYREMQVDILE RAIAVMLPKKDKG >gi|333758476|gb|AFIH01000001.1| GENE 2334 2422241 - 2423677 1658 478 aa, chain - ## HITS:1 COG:MYPU_1830 KEGG:ns NR:ns ## COG: MYPU_1830 COG0442 # Protein_GI_number: 15828654 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Prolyl-tRNA synthetase # Organism: Mycoplasma pulmonis # 3 478 25 501 501 455 45.0 1e-127 MADKKLVEQITSREEDFAQWYTDVVKKAELTDYSSVKGFMVIRPAGYAIWERIQEELDSR FKATGVQNCAMPLLIPESLLQKESEHVEGFAPEVAWVTYGGSKRLEERLCVRPTSEVLFC DYYSKVVKSYRDLPQLLNQWCSVVRWEKTTRPFLRTREFLWQEGHTVHATAEEAEERTRM MLDIYADVLENELAIPVVKGRKTDKEKFAGAIATYTVEALMHDGQALQCATSHNFGDGFA KAFDVQYLSKENKIEPVHQTSWGITTRTIGALIMVHGDDSGLVIPPRIAPTQVVIVPIQQ NKEGVLDKAYALKEELTKAGIRVKVDDSDKTPGFKFADGEVRGIPLRLEIGPKDIEKNQA VLVRRDNREKLVAELSGLSTKVEELLQQMQKDMYERALSFQKERTTDAKGLDELVASIDK KPGFVRAMWCGCRECEDKLKEYSGITSRCIPMAQEEISDTCVVCGKKAAKMVYWGRAY >gi|333758476|gb|AFIH01000001.1| GENE 2335 2423964 - 2424959 832 331 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|291562113|emb|CBL40929.1| ## NR: gi|291562113|emb|CBL40929.1| hypothetical protein CK3_11920 [butyrate-producing bacterium SS3/4] # 5 328 8 335 336 236 38.0 2e-60 MNFPLSEKKLEKDVLKKDKREAKHIGPIGIGEKALYLNSFYIDRMYYIPIEAIERVYKRV AMSKGGFSGKGIFASLSYLVVEYDGGKEKACLIRKEWRVDEALSEIRKRFPHLPTMSKRA EESLRREEEEEKAKLLPKLSEEAEKAVSEIEEADSLLREREELCKNLAVRAKQERMVQST NPYYGHFALLLFFGGLLCLLSAGIFYKNGDQSHAIVLFGFFLMLFLVGFRVRPTGRQNKE EVEREYEESIRKMKDSLPEDFPLPARYAHPVCLLWMKQNILEGKAETLASSYELLKKELK ELDSTKQVSQKVYDWLVVIKPMFMAAEYRDE >gi|333758476|gb|AFIH01000001.1| GENE 2336 2425123 - 2426565 1450 480 aa, chain - ## HITS:1 COG:MA1905 KEGG:ns NR:ns ## COG: MA1905 COG1966 # Protein_GI_number: 20090754 # Func_class: T Signal transduction mechanisms # Function: Carbon starvation protein, predicted membrane protein # Organism: Methanosarcina acetivorans str.C2A # 1 472 1 467 479 423 53.0 1e-118 MVSFFVCLFILIGGYFTYGKFVENTFGPDDRETPAVRINDGVDYVVMPEWKLFLVQLLNI AGLGPIFGALTGAEWGPVVFLWITFGTVFAGGVHDYFSGMLSERSEGASISEVTGNYLGL GMKNLMRVFSVVLLIMVGTVFAVGPAGLIVTLIKSGGSANAVLTNKEVWLWIILFYYLIA TFCPIDKIIGKIYPVFGICLIAMALGVGIGIFSHGFVIPEIFEHFANEHPDRLPIWSFMF ITVACGAISGFHATQSPLMARCMKSEKQGRFVFYGAMVAEGIIALIWAAAGCAIYGSQKL VDLLGGNSTTVYEICKTTMGSVGMFLAMMGVIACPITSGDTAFRSARLTIADWFKIDQND FKKRGLLTLPILGAGAVISHLPYNVVWRYFSWTNQTLAMIVLWAASMYLYREKKNYWITA VPAVFMSAVSMTYFFCAPECLGAFGLTTTVAYPAGILLAALFLILFLRATKKPYSGEAKA >gi|333758476|gb|AFIH01000001.1| GENE 2337 2426617 - 2426724 57 35 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNYSKTFFGQINKVMKICPNGEKNAFNLCLATINS >gi|333758476|gb|AFIH01000001.1| GENE 2338 2426907 - 2427656 347 249 aa, chain - ## HITS:1 COG:DR0411 KEGG:ns NR:ns ## COG: DR0411 COG1028 # Protein_GI_number: 15805438 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Deinococcus radiodurans # 16 236 3 224 227 86 29.0 4e-17 MKKGQKEGNSARHSERKLALVTGASGGIGRAIAEKLSEMGYFVYGIGRDFKEEEGSCPFL PVRLDLRDRKASEEFFRKLKSEGKLSVLVHSAGVAYYGFHESLNAEKIMEMTEVNFTIPL SITQYFLRDLKEEKGHIFFLSSVTALHENGYGAAYGATKAGLLSFARSLFVENRKSGLKV HSILPDMTDSHLYRNADFTVGENAESYLLPSDVASAVETILRQREGVVLEEVHLRPQVFQ ITRRPSKIR >gi|333758476|gb|AFIH01000001.1| GENE 2339 2427765 - 2430032 1037 755 aa, chain - ## HITS:1 COG:FN0898_2 KEGG:ns NR:ns ## COG: FN0898_2 COG1533 # Protein_GI_number: 19704233 # Func_class: L Replication, recombination and repair # Function: DNA repair photolyase # Organism: Fusobacterium nucleatum # 418 748 6 329 330 261 40.0 3e-69 MIFIFAAHYGEVENIIKQKKMGKRKISFPFLQYCTDGWNESGAKKEQKQAGKERSCMKES AGADGRILLTICGEGRNNAAAAVAATLAKEEAKKGDILLSIGSAAMLKGVGEERLLGKWF LIHALEEEGSGRAFYPELLYQTDFPTARLITGDKVLRRSGATCTTETKSYSSIEEEISPA SDSGKENVSPFGTNAFVPMCGERPERMDAEETLLYDMESTAVFQAANAFLSLENLFFLRC GTDFGIGENGSRQLESGKTVPEMLREQMRKEEEKVFSFLSNLERLDAEKEKEREKEEAFL RESTTLAEELRLSFVLAKKLEGLLSYAESLSSEWRAYFQKKREEGCLPCRDKRGGQKVLS DFTAWLLVQEKQGRQDKEEAVDALGAMKEASALSRKKEEFRQKRRKESEKALPLYPPFSH IYIEEALLGGEEAEAILRKFPKAKCIPIRHYKDLFNRRKQNRALQEKSRKLILAKKEGQR IYPGAPVCQSFSESSFYYASLLMNCPFHCEYCYLQGMYPSANLVLFLNLEDYFSDCQRLI KERGSLYLCISYDTDLLALEELYPFVERFARFLEKEPNLRIEVRTKAGGESLFRRLLKMH LSQDAKKRLIFAFTLSPEKIVSEAEHGTVGLKGRLKAVKMAMEEGFTLRLCFDPMLYHAD WGRLYSALLETVFREIPMEKLYDVSVGSFRISESYLKTMTKSCGASPYISFPYENTDGYY HYPKELLLKMEGFLEQRLLEKLPKEKIFRWTEEEK >gi|333758476|gb|AFIH01000001.1| GENE 2340 2430084 - 2432138 1791 684 aa, chain - ## HITS:1 COG:BH1392 KEGG:ns NR:ns ## COG: BH1392 COG0855 # Protein_GI_number: 15613955 # Func_class: P Inorganic ion transport and metabolism # Function: Polyphosphate kinase # Organism: Bacillus halodurans # 8 681 20 698 705 443 39.0 1e-124 MKDNRQCYRNRELSWLLFNERVLNEAANPRVPLMERLQFVSIYQTNLDEFFMVRVGTLME QMNGKKTTKDNKTGLSSKEQIALILEEVERLELKRKEIYEQLMGELEPAGIHIINFQKLS KQEQSQLEAYFDKAIRPYLSPMIVGKQQPFPFLQNRELYAVARLETKGGKKRLGIVPCWN PVFKRLIEIPGRKGYHMLSEELILHFVSKLYPAYQIREKSIIRITRNADIDAGDVYDEDL DYRGMMEQLLKKRKRLNPVRLELSRDLHKSIKKKLAKFLGISEEHVLHCGTPLDLSYLFT LQNTMREHQEWYYPKYSPRMSPEIRRDENILSQVERRDILLSYPYESMKNFISFLQAAAV DSSVRSIKITLYRMANHSQIVDALCEAAENGKEVLALVELRARFDEAANIEMSRRLEDAG CQVIYGLPDYKVHSKLCLITKQTEEGVSFLTQIGTGNYNEKTATLYTDLSLMTANQAIGR DALEVFRTLLLGETVEESSALLVAPKGLQNAILEKIAAEGRKAEAGRGAYIGLKLNALTD KDIIDALIEASQKGVVIQLLIRGICCLIPGIPGKTENIQVHSIVGRFLEHSRIYRFGQGE EEEIYIASADFMTRNTLRRVEVAAPIYDERCRMRVREIFDLGFKDTEKGKWLLSDGLYHD PEGVGEERFNSQDFFYREAYRNLE >gi|333758476|gb|AFIH01000001.1| GENE 2341 2432363 - 2433784 1510 473 aa, chain - ## HITS:1 COG:STM0969 KEGG:ns NR:ns ## COG: STM0969 COG0531 # Protein_GI_number: 16764329 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Salmonella typhimurium LT2 # 1 468 4 470 473 422 48.0 1e-118 MEQKKISWKLLAFMAFSTVWGFGNVVNGFVWFDGIQVIFSWIFMFALYFVPYALMVGELG SAFKNAGGGVSSWIRETMGTKLAYYAGWTYWACHITYIASKPSGGLKALSWVIFRSAELY DRLPSIYIQLITFALLLIFCYVASRGLNPLKKMATLAGSSMFIMSLLYILMMFAAPVINP KADYVTMDFSLKNLIPQFRLEYFTSLSILVFAVGGCEKISPYVNKVENPSKGFPKGMIAL AIMVVVCAMLGTIAMGMMFDPTVIKASDESFNSYAANGAYWAFQRLGQYYNIGDTLLIIY ALCNMIGQFAVLIISIDAPLRMLLDNEDTKQFIPKKLLKQNDVGAYTNGIVMVAVLSGSI ILVQSFVPGAAAVLKQLTKLNSVCMPLRYLWVFAAYIALRKAGDKFHPEYCFVKNNTLAL AFGVWCFLITAASCLLGMYSDDLFTMALNIITPLVLSVLGIIMPILAKSEAQK >gi|333758476|gb|AFIH01000001.1| GENE 2342 2433901 - 2435235 1232 444 aa, chain - ## HITS:1 COG:CAC0607 KEGG:ns NR:ns ## COG: CAC0607 COG1362 # Protein_GI_number: 15893896 # Func_class: E Amino acid transport and metabolism # Function: Aspartyl aminopeptidase # Organism: Clostridium acetobutylicum # 14 429 9 432 433 404 48.0 1e-112 MAANKAAEVKKLNRKLMDFLDSSVNAFFAVENMKNILLEEGFLPLYEGEDWNLKKGGKYF VTRNGSALIAFVLPKKPFKGFQMMASHSDSPVFKIKGEPELEIDKSYIQLNVEKYGGMIC SPWLDRPLSIAGRVLVKTEKGVETKLVNIDRDLVIIPNLAIHMNREVNDGYKFNAQKDML PLFSTIEGKGSFKKTVADAASVKEEDILDWDLFLYNRQRATILGGKEEFIASGRLDDLQC AFSSLQGLLSATPKESVALHCVYDNEEVGSGTKQGADSTFLKDVLHRILFAFGMGEEDYM KALQNSFLVSADNAHAVHPAHLDKADALNRPYMNKGIVLKYSANQKYTTDAVSAAVFKRF CDKAKVPYQSFANRSDMLGGSTLGNISNSQVALNTVDIGLPQLSMHSPYETAGVEDTYYL VEVAKLFYSSSVLGRGDGNLEIKF >gi|333758476|gb|AFIH01000001.1| GENE 2343 2435585 - 2435794 428 69 aa, chain + ## HITS:1 COG:no KEGG:Acfer_1414 NR:ns ## KEGG: Acfer_1414 # Name: not_defined # Def: hypothetical protein # Organism: A.fermentans # Pathway: not_defined # 3 53 6 56 69 73 72.0 2e-12 MAKISSDMLVGQIVNEHPELIDTLLEVGMHCLGCPSSQMESLEDACMVHGLNPNAVLGIL NEKLSEVSE >gi|333758476|gb|AFIH01000001.1| GENE 2344 2435794 - 2436399 687 201 aa, chain + ## HITS:1 COG:no KEGG:Acfer_1413 NR:ns ## KEGG: Acfer_1413 # Name: not_defined # Def: hypothetical protein # Organism: A.fermentans # Pathway: not_defined # 1 199 1 197 202 194 51.0 2e-48 MSAFLGPIHYWLYNKIQLQEELIRKMAEYGEKAGWPVFSEKHLEKETVNKELRPLNELID VMNIHGWLQERVQDAEARYALLVSSVLKEDSDRLPELEKLAFQFGKERALDASSDASDAY RKMDDSLLNGMPCDRVNVITEQDPERTSWVQEEDIHAPFWIAVDGDPTVYYRLRTKIMEG MLFGTELHLDCSEEGHYSLYK >gi|333758476|gb|AFIH01000001.1| GENE 2345 2436450 - 2437013 607 187 aa, chain + ## HITS:1 COG:CAC0760 KEGG:ns NR:ns ## COG: CAC0760 COG3945 # Protein_GI_number: 15894047 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 5 185 4 183 184 174 54.0 6e-44 MNVSIAIMEEEHSNINRALAVVRTICLQMMQGAEVPDDDFRQIIDFIRNYADKHHHGKEE KFLFPAMVAKMGPVADKLVTHGMLVEHDLGRADVLALETALNEYRKNPIPELKLDILSYA MAYAHLLQLHIEKENSVVYPFAERGLSEEDFRDINEKSETYEAEKKKEGIQEHYLTALGA LEKKYRL >gi|333758476|gb|AFIH01000001.1| GENE 2346 2437262 - 2438002 681 246 aa, chain - ## HITS:1 COG:CAC0884 KEGG:ns NR:ns ## COG: CAC0884 COG0664 # Protein_GI_number: 15894171 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Clostridium acetobutylicum # 35 240 14 215 229 83 26.0 3e-16 MIEEKKACCSCGCSTTEERKKLNKEEVLRYSDMEIFKGIEKENLNALLYCMKSYVRSYKK GEMIHLEENHEKHVGVVLYGSIHMIKTDVWGKETLLTYMGEGEIFGETFGNSASEDEYVS FLSAAKTEVLFLSFEKAIHVCKNQCGFHFRLIENLFDLISKKNIQLMEKIEVTSRSSLRE KILAYLSLQAQKQKSKYIELGLSRTDMAQFLCTNRSAMTRELSALKEEGIIDFDRNTFIL KAQAAL >gi|333758476|gb|AFIH01000001.1| GENE 2347 2438198 - 2439841 1550 547 aa, chain + ## HITS:1 COG:CAC3428 KEGG:ns NR:ns ## COG: CAC3428 COG1151 # Protein_GI_number: 15896669 # Func_class: C Energy production and conversion # Function: 6Fe-6S prismane cluster-containing protein # Organism: Clostridium acetobutylicum # 5 542 3 564 567 768 68.0 0 MENKMFCYQCQETANCSGCTVSGVCGKKPDVAAMQDLLVYATKGLSAVAEELRAEGKEVS PELNHRVTMNLFITITNANFDKDAIVENIKETFALRDAVRATLSDSSKLPKAATVEVAEK DYEIFAQSIGVLATENEDIRSLRELITYGLKGLAAYSKHANALLKDDANVDAFIQKALTK TLDDSLSVDDLVALTLETGKAGVEGMALLDSANTSTYGNPEITTVNIGVRNNPGILVSGH DLRDLEMLLDQTEGTGVDVYTHSEMLPAHYYPFFKKYKHFAGNYGNAWWKQKEEFEPFNG PILMTTNCIVPPKDSYKDRLWTTGAAGYPGCKHIGGKYGEIKDFSAIIEQAKSCPAPTEI ETGTIVGGFAHEQVFALADKVVEAVKSGAIKKFVVMAGCDGRQKKRDYYTEFAKALPKDA IILTAGCAKYKYNKLDLGDIGGIPRVLDAGQCNDSYSLALIALKLKEVFGLDDVNKLPLA YNIAWYEQKAVIVLLALLYLGVKNIHLGPTLPAFLSPNVAKVLVENFGIAGIGTVEDDMK IFFPETA >gi|333758476|gb|AFIH01000001.1| GENE 2348 2439888 - 2439956 60 22 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRIAVSSKFKKEIALFRDNLFF >gi|333758476|gb|AFIH01000001.1| GENE 2349 2440111 - 2440476 411 121 aa, chain + ## HITS:1 COG:SMb21412 KEGG:ns NR:ns ## COG: SMb21412 COG3189 # Protein_GI_number: 16264987 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Sinorhizobium meliloti # 1 117 22 137 141 99 47.0 1e-21 MCRLQTKRIYLAQAETDGFRILTDRLWPRGVAKEKAAIDYWAKDFSPSTHLRKWFDHKEE LFPRFRELYREELENNPDKESLIQLVKEHLEKENVSLLFASKEEKMNQAVVLLEWLKEKL A >gi|333758476|gb|AFIH01000001.1| GENE 2350 2440494 - 2441606 776 370 aa, chain - ## HITS:1 COG:CAC3580 KEGG:ns NR:ns ## COG: CAC3580 COG2070 # Protein_GI_number: 15896814 # Func_class: R General function prediction only # Function: Dioxygenases related to 2-nitropropane dioxygenase # Organism: Clostridium acetobutylicum # 14 356 14 352 355 308 46.0 1e-83 MNQLKNCLENRGLEIPLIQGGMGVGVSLSGLAGAVAKTGAMGCISTADCGYREEDFRRSP EEANLRALRKEIRRARELSEGRGLLSINAMVATRQWEDAIKVAVEEGIDAVISGAGLPLS LPELVPEGKALIAPIVSSGRAAKVLLKTWSQKYQRTADFVVLEGPLAGGHLGFKAVEVEE GKAKSLEELIPEVLAALQSFEEEFGRKIPLFAAGGIWSREDIVRVQEAGAYGVQMATRFI GTEECDASTAYKEYLISKSEKDLAIIHSPVGMPGRAVKSPMLEKLGETGRIPPKHCSRCI HSCDPGSVKYCITHALISAVEGNVEEGLFFSGANLGKLREIVSVREIVEELFPRKEKAPV PEGTEDILKA >gi|333758476|gb|AFIH01000001.1| GENE 2351 2441963 - 2442385 591 140 aa, chain - ## HITS:1 COG:CAC0587 KEGG:ns NR:ns ## COG: CAC0587 COG0716 # Protein_GI_number: 15893876 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Clostridium acetobutylicum # 2 137 4 139 142 108 49.0 2e-24 MIKVVFWSQTGNTEAMADAVVEGIQAAGGEGKAISVSDISAADLAGESVFALGCPAMGDE VLDEGEMEPFVEELLPSVSGKKIALFGSYDWGDGEWMRTWEGRMKEAGAVLVAEPVICNL TPDEEGLANCKALGEALAKA >gi|333758476|gb|AFIH01000001.1| GENE 2352 2442627 - 2443217 377 196 aa, chain - ## HITS:1 COG:no KEGG:Clole_3254 NR:ns ## KEGG: Clole_3254 # Name: not_defined # Def: hypothetical protein # Organism: C.lentocellum # Pathway: not_defined # 10 167 25 172 204 91 35.0 2e-17 MVKEHLCLNAPVIVGLKPAAIFTVTKEEKKLLERVLLQRRNAGAEQGTESELSILTLYSA EKESILLYRKETLLRHLADKRVQRFLYSLHLGYEEGEDWILRFKERFQNYKGAGDVFPHE VGIFLGYPLWDIRAFIENPKQKAKLTGYWKVYFDVEGALRRFQLFDECIARFTAFAERCE NLAVMAGYCCEEAFAA >gi|333758476|gb|AFIH01000001.1| GENE 2353 2443327 - 2443440 63 37 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKEILQSCKNCGGGQVREAKGGKRGICSFGLKSTGQS >gi|333758476|gb|AFIH01000001.1| GENE 2354 2443528 - 2443644 57 38 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLFCYHFEGGLRNLYLQEKVPELSMKSFFISYILCNCV >gi|333758476|gb|AFIH01000001.1| GENE 2355 2443749 - 2444954 1143 401 aa, chain - ## HITS:1 COG:CAC2832 KEGG:ns NR:ns ## COG: CAC2832 COG0436 # Protein_GI_number: 15896087 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Clostridium acetobutylicum # 1 387 6 391 393 358 45.0 1e-98 MEGLMAGNSVIRKMFEMGQEMAKNYGKDQVYDFSLGNPVAPVPYEVKNAIISLLENQDPH EIHGYMKNAGFDDVRTQVAEHLNSRFGQNYHKDNILLCAGAAGGLNILMRCLLDEEDEVL CFAPYFTEYKSYVSHYKGKLVVVPMKADDFSLNLDAAERMIRQRTKAVILNNPNNPSGII YSEEELLLLTKMLKEAEERVGHPIYLICDEPYRELAYDGREVPYLPNLYRNSIYLYSFSK TLSIPGERIGYMAISDAVEDGELLMQAAIIAGRTLGFVNAPSLFQKVIGQCLDVKIDLGF YDRNRKLLYTELTEMGFTCVPPQGAFYLLVKSPLEDTESFVKLAEKQHIILVPTDGFGLP GYFRLAYCVPYEKIEASLPAFRALAEDCRNWKSDKEAEEEG >gi|333758476|gb|AFIH01000001.1| GENE 2356 2445011 - 2446087 770 358 aa, chain - ## HITS:1 COG:lin2818 KEGG:ns NR:ns ## COG: lin2818 COG4905 # Protein_GI_number: 16801879 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 2 209 12 235 270 119 31.0 7e-27 MLYCMFGWCFESAYCSIKSGHLQNRGFCHGPWLPIYGVGASLLLLFTQGHEGNRLYLFLV GFFGGTCLELVTGFLMNKIFHMRWWDYSQNPLNFHGYICLPASIGWGLAAIFVIRVVHPR IASIPETWSYITFVVMNTIFYTLFVEDVIFSVIAALELKERVTRLAANSEEIQLLRKSIA EVYEKLADTRAEWEQSAEEIREVQKTEGNVAAAKLVASSVKDSTVAVASTVKDSTVAVAS TVKDSTVAMASSMKDSTVAVASSLKNSVVAVAGNVKDSAEAIFSGQKTLVELEKDKTRLE ERLSLLEDGGNENSGKMPWWVKTMLRNNPEAVSEASGFDDLKKAALKPLKDTNQHGSL >gi|333758476|gb|AFIH01000001.1| GENE 2357 2446213 - 2446881 556 222 aa, chain - ## HITS:1 COG:CAC2496 KEGG:ns NR:ns ## COG: CAC2496 COG0546 # Protein_GI_number: 15895761 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Clostridium acetobutylicum # 1 211 1 203 208 145 36.0 8e-35 MEMEAVIFDVDGTIWDSAKEVAESWTEAFQNYPESKGRVLTAADLEPYMGLTMEAIGEGL LPGLEKERREEIMCYAMEYENIYLAKHPGRFFPDFVSTVKSLEKAGKKLFIVSNCQSGYI EAMLTAAGLAFGEGQLIRDIECFGNTGKSKAENIRLVMERNGLSREKTVYLGDTALDRAS AKECGIPFIFASYGFGNPESFEEKITCLKELPEALERLAKRG >gi|333758476|gb|AFIH01000001.1| GENE 2358 2446856 - 2447722 666 288 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227874137|ref|ZP_03992343.1| ## NR: gi|227874137|ref|ZP_03992343.1| hypothetical protein HMPREF6123_2282 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_2282 [Oribacterium sinus F0268] # 9 277 1 273 276 141 35.0 5e-32 MNHELRGNMLFREDLAEEKDPFSDWPESFYEERNPEKREKLILEKIRRLQGDAPEEQSEN GKQEEEQPEEQSENGKREEEQPEEQSENGKREEEKREEEKRLSVLYERYPSLQDRPLRES KAFQKNPIIVDRYMYSWMNILIAGRTGIHFWNRRAVKKELDKLLDIFVPDGKMEGQTEGG ADALSALRQKEIECFALLWLENCVKDKSYGSTVFGMIRMSDESLSRKMAEEIGEVLLFIP AAVGLEEKARPVKEVFLELYFRKINGGEEQWKTVMEERGLNGNGSSDF >gi|333758476|gb|AFIH01000001.1| GENE 2359 2447896 - 2448582 479 228 aa, chain - ## HITS:1 COG:no KEGG:Closa_0515 NR:ns ## KEGG: Closa_0515 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 222 1 217 260 173 42.0 6e-42 MLQGFFNYDNDIWRFVGRLADIMVLNLLWIVCSLPIVTFGISTTALYYCTLKIVKDEDDG NFRMFFRSFKRNWKEGLIIWLILLPVLGILLLDHRFFTVLFQNHAVLRFLLQGITDALIL LWIFVFLYVWPLLSRFENSWQKVMLHALLMSIHHLPYTLGILALDFASVILVFFLLRLVP MFVPVFFILGFPLLAWMNSAFFRRIFARYEKKKPEEQEPEEENVQSEK >gi|333758476|gb|AFIH01000001.1| GENE 2360 2448589 - 2450166 1093 525 aa, chain - ## HITS:1 COG:TP0106 KEGG:ns NR:ns ## COG: TP0106 COG1292 # Protein_GI_number: 15639100 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Choline-glycine betaine transporter # Organism: Treponema pallidum # 11 505 2 506 510 397 43.0 1e-110 MQNSEQKSNSEKERLDFGISGIPLLAILLMCFFFFRFPENSNRGLSAIRSFLGSEFAVYY LGLGLFIFLLSLFIAFSPYGTIVLGKPDEKPAYSFFTWGSMMFTAGLAADILFYSLCEWI LYVREPYIQSLGNAEEWATVYTLFHWGFIPWGFYLVLAAAFGFMLHVRKRKRQRYSEACR SILKEKTDGILGRGIDLLAVFALLAGTATTFSVATPLMAEIIRKVLPGFSTVTLTILILV ITCVVYTYSLLKGMAGISLLAKTCTWLFYSLLFYVFFFGGAGNFILKHGFSAFGKMVEHF PSMATYTDALGENHFPENWTIFYWAYWMVWCVASPFFIGSISKGRTIRQTILGGYVFGVG STFVSFLVLGNYSLSLELFHRVPILSIYEKTQSLYEVIVQALEALPLAPLVLALLFLTML AFYATSFDSIALVASQYSYKNLEEGEEPNKKVQGFWAVLLILLPLALVFSESSMANLQSV SIIAAFPIGFIILLISFSFLKDAKAYLKELEKRKTGNSEEEAGKE >gi|333758476|gb|AFIH01000001.1| GENE 2361 2450141 - 2451457 1250 438 aa, chain - ## HITS:1 COG:YPO1507 KEGG:ns NR:ns ## COG: YPO1507 COG1879 # Protein_GI_number: 16121780 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Yersinia pestis # 262 434 161 333 335 116 40.0 9e-26 MRVNRRRFLTWILVVLLLFSLSACKTSEKRREKKKIKIGITLYDSHDTFITGYMSAFDKE VAEKRAEGYEVDVLRFNAEGSQSVQNEQVEEMLQNSCDVLCINLVDRTAPSEIIDMAKKK NTPVVFFNRELVEEDLYRWNQLYYVGADAKQSGILQGELVAEDILAEAEKEASGREEGKE EGLSAEHEEESISSAEEPGAPETTRTLEEETAPEEPAPEGVTESETEWEGELGGRLLGEE FDTTVQSKTESEKSVALPRSVDKNGDGKLQYVLFEGEAGHQDAIMRTEYVVSTLQKKGIP LERLGYGIANWSRAEAQSRMMQLYSELEDKIELILSNNDDMALGVLDAYDKIGVQKDARP WIYGIDGTMAGINAVKKGAMKATVYNDEMAQAKALFNIAFQLATEDGGKEGDRDIQKITK IPYRKVTGENYAEFRAEE >gi|333758476|gb|AFIH01000001.1| GENE 2362 2451566 - 2452534 894 322 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_0483 NR:ns ## KEGG: EUBREC_0483 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: ABC transporters [PATH:ere02010]; Bacterial chemotaxis [PATH:ere02030] # 31 319 57 347 351 93 25.0 1e-17 MKENRIFTVAVAVIAMILLLLSLGRFLGENKPEKYKISIVVDRSSSASWDSFRRGLNAAV KQYNMEYNFVTTSRFSSIQQEYASLTREVKNGTDGIITELRATEGTGEILDELGKQVKIA LVESERENVRPDLFIPTFSVDEEALGTALGTEVLQSSLQAEKLSIGILAGNQSKGNMKKR LDALKKVLESGEQEIAWVIEDRGQYRKDLDEESHRKSVDVIIALDNDSLEAAAHYTQETG RSFIELYGVGDSEEVIYDLDTGVIRSLIVIDHYDMAYSAVEALWKQLSGGRKTGETHLVD FYVVKAGNMYSKKMERILFPTD >gi|333758476|gb|AFIH01000001.1| GENE 2363 2452443 - 2454356 1463 637 aa, chain - ## HITS:1 COG:FN0190 KEGG:ns NR:ns ## COG: FN0190 COG2972 # Protein_GI_number: 19703535 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein with a C-terminal ATPase domain # Organism: Fusobacterium nucleatum # 6 577 16 550 552 187 26.0 4e-47 MILMSFMLLSIIIILFLSSVLYLQFSARLKEERETQAEQLLKQGGNRLEEYLISMRQISD AMYYDVIKGSNLNLLKVNTEMNLLYEAHKESLVSVAIFSGGGKLLTAVPNSTEKKNRKVV EQDFFTSAVQQVENLHFSLPHVQNLFDDPSFRTHWVVSLSRVVELSENGASSNGVLLVDM NFNTIERMMEKLNGEDQYRYFYLCDKKGNLIYHPRMREILRNDFQENTELLSELDDGIHH IKAGSNSRAIIVDTIGYTGWKMVAVLEEGNRIFASGGMLYYVFILISLTLLISLLFNQLV SLRLSYPIRKLNEDLEKMGERRLSMEDIAHYGSTEIIHLGKTLVQSFRQIDRLTEEKIEQ QEEKRQTEMDALQSQINPHFLYNTLESVVWMIESGKKDDAVFMVTELGSFFRISLSGGKN IIPLSQELQHAKNYMNIQQIRFKDKFKVDFTVSEEVLRCLTVKLILQPILENAIYHGMAG VDEDGEIHVRGEMIKGENSSMVLLSVEDNGFGMTEEKAESLLDTEAEISDFSDRKKRGSG VGLINVHRRIQLRFGTRFGLRIHSEPDEGTRVEVRLPAIEYTEETQKSLEHGNMHSSTDG FHGGGKDNERKSDIHGGGGSHSDDSSAALSGKIPGGE >gi|333758476|gb|AFIH01000001.1| GENE 2364 2454467 - 2456092 1410 541 aa, chain - ## HITS:1 COG:BH2109 KEGG:ns NR:ns ## COG: BH2109 COG4753 # Protein_GI_number: 15614672 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain # Organism: Bacillus halodurans # 4 537 2 525 525 140 24.0 8e-33 MKKYSVLLVDDEEDVVKAIMQKIDWDGLGYSLLGYAKNGLEALEIAEEKQVDVVLTDIKM PYMDGLTLSHKLKELYPSIKIVIFSGFDEFEYAKEAIRLEAEEYVLKPVDSGELSRIFRT VHERLDKEFDEKQNINHLKNYYLESLPILQESFYTSLIEGNVRQEDLTRAMLDYQIDLTG KFYAVVILHNSISLSPEGINPVLISMSIRKLAEERMHKGWRACFFTYLGNTVILTQLKRE EEHYRLTDEMETLCRMAKYVCNATITAGIGKTVSSLLDLPLSYLGARDAVAYRVLYGRGK AIAVSDINPEERENPSLNRELLDEERLLDVYRSIRMASKEELFKDIDLYIQNSRLEKPSL QEYQFFLMELVTNIHKFLLSNQVDATLIFPKDEDVYQKVQQFSLEELSAWMKRICERIQG IIQEKRSDKTKSFVKKAVEHVHSHYMDKNLSVEGLSMELHVSAAYFSTVFKKETGKSFIN YLTDYRMEKALRLLIEEEEKTYIIAESVGYADPNYFSYAFKKKFGMSPSKYKTSGMKQEG V >gi|333758476|gb|AFIH01000001.1| GENE 2365 2456089 - 2456382 247 97 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227874144|ref|ZP_03992350.1| ## NR: gi|227874144|ref|ZP_03992350.1| hypothetical protein HMPREF6123_2289 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_2289 [Oribacterium sinus F0268] # 1 96 9 104 105 122 65.0 1e-26 MGLPLLFTVLLLYYAIKLMVFQDVESIRPKGRAPIQDKKGYGREAGILVLIFAAISLVAS FCMLIHPFLGISLILLGFILVAMQFRRLEEKYSGDRK >gi|333758476|gb|AFIH01000001.1| GENE 2366 2456655 - 2457257 494 200 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227874145|ref|ZP_03992351.1| ## NR: gi|227874145|ref|ZP_03992351.1| conserved hypothetical protein [Oribacterium sinus F0268] conserved hypothetical protein [Oribacterium sinus F0268] # 1 197 1 199 201 193 66.0 7e-48 MKNKLFIQKLVGTAILAAVVISLQLILGSIKLGPFNITFTLIPIILAAILYGSLSAAFLG AVFGIMVCFSVVSGNDAGGYILFSQRPLITLLLCLLKSTLAGYLAGLSVHCTKQKFLRIL LPAVLAPVVNTGIFILGLVLFFQETLALWANGQDAVVHFLVFSILGVNFLIELLVNLLVS PVIVRILQGIRFTKEEVENI >gi|333758476|gb|AFIH01000001.1| GENE 2367 2457383 - 2458162 931 259 aa, chain + ## HITS:1 COG:BH0086 KEGG:ns NR:ns ## COG: BH0086 COG1521 # Protein_GI_number: 15612649 # Func_class: K Transcription # Function: Putative transcriptional regulator, homolog of Bvg accessory factor # Organism: Bacillus halodurans # 1 251 1 250 254 145 34.0 8e-35 MILAIDCGNTHTNFGCIRESGEIAQIFCMESNRKKTSYEYAADIDEICTLLKISAHDFQA MVLSSVVPELTGSFQEAAEILGIRECFIVNRENVSAVSFSAASYADVGPDLIVSAVAAKK RYPLPAIIIDMGTASTLTVVNREGVFMGGVILPGVGISMNALAKETSLLPSIDVAPAKKL ISLNTVDAMRSGIIYGTAGSLDGLIDRFLKELGQEATLLATGGLSHLICPYCRHSIIVDE NLLLTGLWEIWNDSRKAGA >gi|333758476|gb|AFIH01000001.1| GENE 2368 2458199 - 2460532 1489 777 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227874148|ref|ZP_03992353.1| ## NR: gi|227874148|ref|ZP_03992353.1| hypothetical protein HMPREF6123_2292 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_2292 [Oribacterium sinus F0268] # 1 358 1 362 834 273 57.0 4e-71 MNGFLAALKKDMCLFFRKGGLFSLLFPLLLLPLFLFFFRGSSGGLQAFPVSVIDEDETLM SKTLIRQMEEVELFSEVHKISREDISEELEKGSVGVLRIPKDFFYTAYRFQGEPVELILN ERRATESAILESVFTSIMKIMEKEQEMSLAVFHTAYGEKLSASEEEELYHRASERLLNSV LKRQLIFQNEEVGANVAFALIMRIASALLFLFLSFISLSMVSAVPEEEKKGIVSRFRQMG GRGFYLSKFLLLLLLALPVLALSLLFLYKAFALSPELLLFFALYYKLSLLSFYLFFWGIF SLVREERLAKNFSVCLIFLLLLFTGRLFSAGRLPFSLARFSPISINAVLLEGLRRGYSPA RLMPFVLPLGLFLLLGILLRFVHSFMEKRGLLEKKTGLLKKGGGEEGSFGKSFLMHCLPF PLWRGYILLGRTVGVLLFLLFCLCLGRYAEDKTQEKIAVYLVNEDGGEWSRELLRDLDAE KSLDIQLIPEREKEEKLLYGDKEGVLTIRKGYTGDREEKGKLLYESGSASLSEMGLREIV AAVVAGEKIERGANDYLSSLLGREIRADEQDLLTKNQKQYKRTSPLYTVRKQNGATREEL FSPRREAVYAFLLYFFLFSLASVAGEGEEKRVAARLQSIAGASRRYLIGLFLVFLGVSLC FFFALRLDFSFNTMLSLLSYTLFLFGFSRFLSVRVLGEGAETGLSLNLGLFFCLSGGAFM DFSALSGWVKYLPYLSPVGLFLKGTEGDLLASAILLVIGLCTCRSSYDRPMRLPFFL >gi|333758476|gb|AFIH01000001.1| GENE 2369 2460529 - 2461161 268 210 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 13 210 7 219 245 107 30 2e-21 MEEQICEIRNLGLHYQRGGRAVLKGLSLSFHKGEILGIRGENGAGKSTLLKALAGLLPYG EGEIVFAPKVQKELSYLPQDLSLYESLTAMENLYFYGKIQGLPKKVIFTRATWLLRELGL EEKAGERLSALSGGMKRRVHLASALMKRPAILLLDEPTVGCDNESYERILSLLRKMKAQG TAMLLISHGRGELEEMADRIVYLEDGKIRE >gi|333758476|gb|AFIH01000001.1| GENE 2370 2461181 - 2463157 1780 658 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227874150|ref|ZP_03992355.1| ## NR: gi|227874150|ref|ZP_03992355.1| conserved hypothetical protein [Oribacterium sinus F0268] conserved hypothetical protein [Oribacterium sinus F0268] # 1 633 1 545 573 272 33.0 5e-71 MAKCPNCGKEVSEGFRFCTNCGEKLEPVEPAQSAEPAAETVEEAPVNEPNADAAAEAPVT EPSAEAVTEPAKEEPASEVPVSVANEVPVEAVKEDPVSEPAVEVPEEIQAAEPASEPVSE VPIAPMMEEAVYREPAGAPGDNGQSRETPEEKKKQPPYFLIGVAAVVLLVVIGFVALGKV FGGFNPMQLLGGGTPGQKFLGYQTDYFNGKLKAMEDLGLLRMEDNRALTFTVTGEVKGNK EVAEYLEDSSLVLKTKTNLDKGNLQASLLVKLTGNSVLDAYGEYDNGNFSFAFPSIDKKL YKADVKTLLENNTGEEVQIPDLKKSKENRKLGKKLLAKYGVLLSKSMNKKNLTTEKGTFA IEHLDEDLKDTKYKGTRYTFKPKAEEIEKFVEKLADMMEKDKDIEKFIEQGAYGKYLELI SGYGSNESTAEQLSDIAERLRDNAEDIGEELEDKNLTWVVGVEGKTLHEIYLFSDYDDNG ELDTEEESYFVLASGKDKEEVAEFFNISPNGYSSVVYLWNTYKKKGKTLDGTITGMLDTL YLNKTDYTIETGKKYQILPYGEYKFRDIEGDNGKVTLTVKAGKKNSTDCELKMSGLYDLD YNDIRSMTLHINVKEGADISKPKGKTEDITDYSVYELYDLMREFSSEIEDIGEEIFGG >gi|333758476|gb|AFIH01000001.1| GENE 2371 2463488 - 2463769 243 93 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|317501345|ref|ZP_07959548.1| ## NR: gi|317501345|ref|ZP_07959548.1| hypothetical protein HMPREF1026_01492 [Lachnospiraceae bacterium 8_1_57FAA] hypothetical protein HMPREF1026_01492 [Lachnospiraceae bacterium 8_1_57FAA] # 1 93 1 93 93 117 75.0 3e-25 MKMINRILIALAVGFVIAMLLMSVKIYFGFTNAYSTNINVLTVKILGIPIYELTKSGSEY FGKSIGTHMGAICGICMALSVIIEEIFFKVRQK >gi|333758476|gb|AFIH01000001.1| GENE 2372 2463942 - 2464355 241 137 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0868_0530 NR:ns ## KEGG: HMPREF0868_0530 # Name: not_defined # Def: hypothetical protein # Organism: Clostridiales_BVAB3 # Pathway: not_defined # 2 136 12 147 154 122 45.0 4e-27 MTVSDLEPLYKLLSNSKVMQYLEAPYTKEQTEQFLFRSGLSETPLIYAVEKDNDFIGYVI YHDYDSESVEIGWVLEPSFWGLGIASGLTSGMIAKARNSGKQVVIECVPEQKSSIRIAEK YGFQKCGIIDGLMIYRL >gi|333758476|gb|AFIH01000001.1| GENE 2373 2464553 - 2464846 413 97 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0424_1165 NR:ns ## KEGG: HMPREF0424_1165 # Name: not_defined # Def: toxin-antitoxin system, antitoxin component, Xre family # Organism: G.vaginalis # Pathway: not_defined # 1 92 1 92 94 129 79.0 5e-29 MSDLQELTNELMQDAAFRKEYEALQPERDITMSLVRARKEAGLTQAELSEKTGISQADIS RLENGTRNPSLALLNRIAEAVNSTLRIEFVPNQHLAK >gi|333758476|gb|AFIH01000001.1| GENE 2374 2464843 - 2464998 81 51 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|291458797|ref|ZP_06598187.1| ## NR: gi|291458797|ref|ZP_06598187.1| toxin-antitoxin system, toxin component, RelE family [Oribacterium sp. oral taxon 078 str. F0262] toxin-antitoxin system, toxin component, RelE family [Oribacterium sp. oral taxon 078 str. F0262] # 3 51 69 117 117 76 89.0 8e-13 MFVRILYFFDEDEIIIATNGFVKKQQKTPQSEIQLAKQRRAIYLRRKESIR >gi|333758476|gb|AFIH01000001.1| GENE 2375 2465136 - 2466404 1250 422 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227874150|ref|ZP_03992355.1| ## NR: gi|227874150|ref|ZP_03992355.1| conserved hypothetical protein [Oribacterium sinus F0268] conserved hypothetical protein [Oribacterium sinus F0268] # 1 421 172 569 573 158 29.0 7e-37 MAKYLEDSSIVMKTKTNPEKGSYQASLLFNLMGEDVLDAYGEYGDGKLGLAFPSLEKKFY QGELQSILSNSSDEEIELPNFNKKENRKLAEKLFKKYGSLLSEFFTEENFTVEKGSFKTL VYGVSTNEEKEFKGTVYTFQPSAEDLEGILEKFADKLEKDEDCAKFLIQSGLGIMISENI GYDEFIDESRLADFADWLRENAEELAEELEEKHIKWVLTMEGNQVQRIQVGADREDNGEI DEGEDEVFLDYISILYEKQREEYFLLKPNGSPILQFHNVYKDKGSTFEGRFSFYSSGIPT SPYILIEYSVEKGKKDKILSLPYGEYDFSDALGYDGPRGKMTVKAGKKNSTDYEIKISGL EEDDLPGIKTLSIHVNAKEGADLSRPKGKTVDISDYTLYEVKELGEEFSEELSNIGEEIF GN >gi|333758476|gb|AFIH01000001.1| GENE 2376 2466431 - 2466856 391 141 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227874150|ref|ZP_03992355.1| ## NR: gi|227874150|ref|ZP_03992355.1| conserved hypothetical protein [Oribacterium sinus F0268] conserved hypothetical protein [Oribacterium sinus F0268] # 1 125 1 144 573 82 38.0 1e-14 MRNCPNCGNAVQDGCLFCTHCGEKLEEHPVGEGMPVQEAVGGEAPVQNSANEVHVASSGA ASQETKEKKGGKPYFLIGVAAVFIAVLVGVFVLGKTVLSMGLFLSPKQKFLKYQADYFNE KLNDLDKLEIFPLTKKTSLLP >gi|333758476|gb|AFIH01000001.1| GENE 2377 2466991 - 2468748 1864 585 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227874150|ref|ZP_03992355.1| ## NR: gi|227874150|ref|ZP_03992355.1| conserved hypothetical protein [Oribacterium sinus F0268] conserved hypothetical protein [Oribacterium sinus F0268] # 1 581 1 568 573 434 42.0 1e-119 MKKCPNCGEDLQDQDVFCTYCGEKVESETAPTPVTIEPAAEPASEATPVTAKATPAAVEP TADATSAAAGQTSSAVEPTPVAAEKAPEYARYTVEEKKKKGFSPLIFIGLFLLLAIVVAA VFSFGKNLFSGGLNLSPEQKFLNYQYDYLENKFKALEDLGFLSTEENQEATLVLTGEVEG EEEINKYLEDTALTLETKTDMDKGSLQMSMGLKLMGSDILDAYGEYVDGNIGFSVPTIDE NFYKGDYKKIYENLTGEKADETPDLKQFKENKKTLEKLRKKYGALLSTLITKDNLTVEKT KFTLDSVKKDYKGEVYTFKPKAKDIQAFMEKLATMVEKDKDLETLLEQGSYGNGFEAAMG LEEEPDAKEQLAKFAENLRDNAEEMGKTIEEANFTWEIAVEGKELRQIKISSDQGVYSLE SGKDGAKTVEQLNAQPADSENYYLTNTYTKKGKTLKGSISGGNGIINIQGLEYSIETDKK SVLMPYGTYSVKDPTGMGGEANLTVKEGKNGSTDHELVISGLQSYYLGFDSLKINVNSSD KTKLSAPKGKAVDISDYSEEELSELAEKFGQGFEHIFESLEDVVK >gi|333758476|gb|AFIH01000001.1| GENE 2378 2468965 - 2470521 1529 518 aa, chain - ## HITS:1 COG:CAC3316 KEGG:ns NR:ns ## COG: CAC3316 COG1502 # Protein_GI_number: 15896559 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes # Organism: Clostridium acetobutylicum # 19 518 11 510 510 386 39.0 1e-107 MPKKTKVIHKEDQKNSVGRLLFVVFAVLLQIAWFYLILVHLVDNYIFISIGFRILSVLFI FSIIGKRTNASIKMTWVVFIMAAPILGWVLYILVYGTNFRRTMQKRFELADGMLFPYLDQ SHGVLETLRRESRVAGNQFAMLEQYAGFPVYRNTEVVFYKEASLGFEAQIEALRGAKKFI FMEYHAIEDRESFGEMKEVLLAKAKEGVEVRLFYDDVGSVGFVNPRFVQELEDGGIQCRI FNPIVPIVNLFMNNRDHRKITVIDGQIGFTGGYNLADEYFNIHSPYGYWKDTGIRLRGEA VGTLTLLFLEMWHAMDDSLVRGIYNYLPRHWDRFPGEGYCAPYGDSPIDNKTIGEDVYLN LIASAEDCIYITTPYLIITDEMSRALTNAARRGVDVRIVLPGIPDKKLVYAISRSYYAQL LRAGVRIYEYTPGFIHSKQVLVDHRIATVGTINFDYRSLYHHFENGVLIYESPCIFDIAD DFYEVFRVSREVSPEWGKKRSLLKRSIQGFLRFMAPLL >gi|333758476|gb|AFIH01000001.1| GENE 2379 2470596 - 2471165 419 189 aa, chain - ## HITS:1 COG:no KEGG:Cphy_1463 NR:ns ## KEGG: Cphy_1463 # Name: not_defined # Def: GTPase EngC # Organism: C.phytofermentans # Pathway: not_defined # 63 182 318 437 437 162 60.0 8e-39 MKNGEMAVKRKAKRPGQQKRETDCAVPGREQAEGQATQQAKKQMQQEDKQCVRQQGRESV QADYRTEACMESFFCANCGKEIHPDGAGSNHRNHCPYCLYSLHVDEEPGDRKASCHGKME PIAVVSREDGDWSILHRCKRCGKLNLNRALADDNPILLMQLAVKPLASPPFPLSYLEHFL QENVGLEKR >gi|333758476|gb|AFIH01000001.1| GENE 2380 2471239 - 2472903 1438 554 aa, chain - ## HITS:1 COG:BS_yunI KEGG:ns NR:ns ## COG: BS_yunI COG2508 # Protein_GI_number: 16080295 # Func_class: T Signal transduction mechanisms; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Regulator of polyketide synthase expression # Organism: Bacillus subtilis # 1 540 1 524 531 148 23.0 3e-35 MKIQDVLKDKRFSEFSLIAGLSGAGNAISTVTVIDTPDGAKWLSGGEFVITTAYMLKDDE EALLAFIHTLHRRNASALGIKQGRYIENIPDSAVSLADDLGLPLLLIPQKFPYADIINPI LSELVNQQTNRLIQANLIHTKFTELAVSDASIPDILATFMSIVGVPAAFLDFETVQIWYS DSDSSLAQHLQAERILSHRDLDRTRYDLHLIANQSRSFGVLIFEKGVLERETGEESANAL LMQEKDPGFKIALENTTTNIILREQTIISNRQVAERYKGLLIQDILIHNIKSETEIHNRA EIFGWDFHDGGIVLEVDINNIKQRFKRNFSNNTSKMLEEMSTEIFDISIREILKFYPNAH YVNLSDIIIFVLSIRPKERKQMEKNFAEIFSKIQRCIANIPFTISFGIGRYYENIEQIYL SYQEAREVIRLSYIFSWFDRILYYEKMDLFRVLLPILDNQEALEACRNCLQPLLDYDRDN GKNMLETLQIVAECDWNLKLAAERMFLHPNSVKYRMEQIGKLIHRNFREHSDRLFLEIAI LTYTMSKKLPDWTE >gi|333758476|gb|AFIH01000001.1| GENE 2381 2473259 - 2474434 1381 391 aa, chain - ## HITS:1 COG:FN1063 KEGG:ns NR:ns ## COG: FN1063 COG1473 # Protein_GI_number: 19704398 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Fusobacterium nucleatum # 4 391 5 394 394 348 46.0 9e-96 MWWKECKDLQEEIVAMRRELHKIPELGFNLPKTREFVVKKLDEIGIPYTLSEKDSSVIAT MKCGKPGKVLALRADMDALPITEDTGLSFSSTHPGCMHACGHDTHAAMLLGAIKVLYPHR EELSGEIRFFFQTAEELAKGSAIVIENGGMEGVDAVFGIHIGSILDKTIPCGTIACIPGP IMASYDRFVLDVKGVGCHASTPEKGVDPINMASHIVLALQTINAREIAATDAGVITMGMI RGGEQYNAIPSTVHIEGTTRALKEEIRQKLAKRIGEIAKTTAEAFGGSVDYTMDWGAPPV INDKDMALFAQDAIRDIFGEHMVTYRESPNMGGEDFALYLQKAPGAFMFLSSANPAKKTD YPHHNPKFDVDEDVFWMGSASFVAIAEKFLK >gi|333758476|gb|AFIH01000001.1| GENE 2382 2474483 - 2475160 724 225 aa, chain - ## HITS:1 COG:no KEGG:Amico_1858 NR:ns ## KEGG: Amico_1858 # Name: not_defined # Def: hypothetical protein # Organism: A.colombiense # Pathway: not_defined # 5 215 6 223 229 180 47.0 3e-44 MDSKEYMPIWRKKSILIGSPTNILAAITAFIPVLYLCIRYNCWPDPKLVIAAWGMLLISF GAFYVVEPVSYYAALGMSGTYLSFLSGNIGNMRVPCAALAQDVTKSEPGTIQAEVVSTMA ICGSIITNLIATTAAAFVGAAVVTVLPAVVSEGLKSYASAAIFGATLGNFGMKNPKLALI GLAIPICCKAVGGLPAWLIILLSVFGTVIFARIFYVMDKKTAQTA >gi|333758476|gb|AFIH01000001.1| GENE 2383 2475179 - 2475901 755 240 aa, chain - ## HITS:1 COG:no KEGG:Amico_1857 NR:ns ## KEGG: Amico_1857 # Name: not_defined # Def: hypothetical protein # Organism: A.colombiense # Pathway: not_defined # 13 238 15 242 243 159 46.0 8e-38 MDHVKISNLPIFWLLASFTVFISALQTFLYIREAKKATKVCNVDPEIPKKAFKIGLVSAI GPALGVFIIMVGLMSVIGGPMSWLRLSIIGAAPTELTAATYGAEACGLSGLSDPGYNIQV LAVSWFAMALNGAGWLLFTGVATPGLEKIREKMSGGDMKWLSVMSASCSIGIFAYLVANL SIGKGGLSDLKIGNAYACIGGAIFMILLGKFIVPKVPKLAEYSLGIAMILGIAVAILFGK >gi|333758476|gb|AFIH01000001.1| GENE 2384 2475889 - 2476014 115 41 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFRINTIRNLILLKLRQVERDKRATCPTVTDIMKEENLWIM >gi|333758476|gb|AFIH01000001.1| GENE 2385 2476215 - 2478017 180 600 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225088774|ref|YP_002660041.1| ribosomal protein S16 [gamma proteobacterium NOR5-3] # 345 582 1 233 312 73 31 3e-11 MRERQYHEEKKDHECLAKNCSHQEKSPSPILWALSQTGSHKGEYIKSVLFAVIGVAFSLA PYFVIVEIVDGLMSGNRDFSFYLGKCLITALLWIGRVLFHSLSTGKSHAATFAVLGEIRK RCTEKLIRMPLGAVQEQSSGALKSTIIERIDSMETTLAHIVPEFTANLLIPLCILLYIFS LDWRMGLAELLTLPIGLVSFAFMMGGSQKFYEHAVEATKTLNNTSVEYIGGIQVIKVFGK TKSSYARFVRDAYEAANSYISWMRYYILPMTFSLSVMPATLLPVLPIGGLLVRGGSLSSN HFVMIIILSVGLVTPLITLMSYGDDFQTMGTIMGEVRALLNAPEMERPKEGNSPEKNDLA LRDVHFSYKEKEVLHGISMEIPEGSFIALVGPSGSGKSTIARLIASLWDVEKGGIFLGGK DIREIPQEDYAEKFAFVSQDNYLFNRSVRENIRLGNPLATDSEVEEVARKAGCHDFILSL EKGYDTMVGSSGGHLSGGERQRISIARAMLKAAPIVILDEATAYTDPENEALIQRSVSKL TEGKTLIVIAHRLSTIIDADKIFVIEDGRINDSGMHEELLSRGGLYSAMWKAHEEVKDNA >gi|333758476|gb|AFIH01000001.1| GENE 2386 2478010 - 2479749 1266 579 aa, chain + ## HITS:1 COG:SA2216 KEGG:ns NR:ns ## COG: SA2216 COG1132 # Protein_GI_number: 15928006 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Staphylococcus aureus N315 # 18 577 13 577 577 415 38.0 1e-115 MLSIIRRFFQFCGEENRRKFTLSIFLGVGDAFFNALKIPAIAVMLKALLASEIHMEDIFL SLGIMLLSVFGISLIKSKSMMLQTEAGYDTCARKRVEIAEHLRYLPMGYFNQNSLGQISS VATNTMQMLENVATRVIMQVSEGLLTTSLIILMLFFFDYRIALVLLVGFVLFLFCNSALQ RAAGKLSGRKIEAEASLVEKVLEYLQGMAEVKAYHLSGEKSRELNEAIHENVRINTEMEL SFIPIMALQSLIAKLSGVAMVLFSCLFYCSGSMTTLNAIVMVISAFIVNASLESAGSYSA LLRIVDISVDRAEEILRTPQMSISGEDIQPKKRELSAEALAFSYDQRLIIDGISLAIPEH TTTAIVGPSGSGKTTLVSLLARFWDPEKGKVLLGARNVKDYDMDSLMANFSFVFQNVYLF HDSILNNIRFARPEASLEEVIEVSKKACCHDFITALPDGYDTVIGEGGASLSGGEKQRIS IARAMMKDSPVIFLDEATANVDPENENELMHAISSLTKEKTVILIAHRLKTVSKADQILV LNHGKIVQRGTHEELLKEDGLYRDFIQERKEAVSWKVRK >gi|333758476|gb|AFIH01000001.1| GENE 2387 2479852 - 2480700 632 282 aa, chain + ## HITS:1 COG:no KEGG:Closa_3472 NR:ns ## KEGG: Closa_3472 # Name: not_defined # Def: O-methyltransferase # Organism: C.saccharolyticum # Pathway: not_defined # 1 279 1 281 282 216 42.0 1e-54 MKVLIYGVGLTGRQIYKNIKNDVQVIGFLDGNPEKKGQTVADGLLCFGGAESLSDINYDR IYIGSLFWEDIRKTLLDSGVSEDKIVIDLPEDPISDIRNTWLASYAKLHKGTKASVAEGG VFRGEFAKFINKAFPDSKLYLFDTFEGFDSRDVEYESKNYSFGLNAHEFSNTSIDLVMSK MEHPENVILRKGFFPETAAGIDDRFLFVHLDFDLYLPILEGLRFFYPKMIEGSVILIHDY YNIGLPGVKDAIEDYEKEIGRTIYKLPIGEDQSIALIKDSRS >gi|333758476|gb|AFIH01000001.1| GENE 2388 2480740 - 2481501 330 253 aa, chain + ## HITS:1 COG:L25787 KEGG:ns NR:ns ## COG: L25787 COG0564 # Protein_GI_number: 15672980 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthases, 23S RNA-specific # Organism: Lactococcus lactis # 1 239 68 284 301 79 29.0 5e-15 MDFTAKDFIVSENEDFALVNKPVGMDSERAPGEGFFPVHRLDKVASGLLLYAKNPRSAKK LSESLQEGKIKKRYHIIVESAGDTSKEDDEALSVKTNSTKNTGSSEAKRLPKEGSSKAKR LPKEGSSKAKRLPKEGCFSDYLYKDTKKQKMFPVKKLRKGVKEAVLHYQVLEERDGLALV DVELETGRFHQIRAQFSAHGFPLFGDGKYGSRQKGNVALHCYTLSFPDPKSGEELHFEIK DRDEEPWRKFLKE >gi|333758476|gb|AFIH01000001.1| GENE 2389 2481660 - 2482577 678 305 aa, chain + ## HITS:1 COG:mlr3209 KEGG:ns NR:ns ## COG: mlr3209 COG1092 # Protein_GI_number: 13472800 # Func_class: R General function prediction only # Function: Predicted SAM-dependent methyltransferases # Organism: Mesorhizobium loti # 9 300 58 336 338 202 38.0 9e-52 MFVAKNWKDYEVIDCSRGEKLERWGKYILCRPDPQVIWQSEKKNPLWKKLNGHYHRSKAG GGDWEFFSLPKQWQISYPLGENGEDRLNFHLKPFAFKHTGIFPEQAVNWEWFYRLIKKEK ERREEKGDKTPIKVLNLFAYTGGATLAAAKAGAELTHVDASKGMVSWAKENAESSGLVNS PIRYLVDDCMKFVEREIRRGNLYDGIIMDPPSYGRGPKGEIWKIEDSIYPFLKLSEKILK KDALFFLLNSYTTGLQAGVMQYMLEELIGKGRNGKVSSDEIGLPVAENGLVLPCGCAARW EKAES >gi|333758476|gb|AFIH01000001.1| GENE 2390 2482653 - 2483963 1158 436 aa, chain + ## HITS:1 COG:SP0117 KEGG:ns NR:ns ## COG: SP0117 COG5263 # Protein_GI_number: 15900059 # Func_class: R General function prediction only # Function: FOG: Glucan-binding domain (YG repeat) # Organism: Streptococcus pneumoniae TIGR4 # 52 245 543 722 744 74 30.0 5e-13 MRGRGFIGKLFSYKNISGELFSSARERIQFMHKGFKALLFSLTAASVFSGTAVAAGWTVN ERGQQVYQNDNGSVATNTWIKMTQNGRTEWYYATANGSLKQDGWQKIGDSYYYFDGNGMM QTGWVQDDKYYCDPSSGRMVTGWKLLPLPEGVSAAEGRKSINNNYWFYFNESTGEKLYAR DERVVIKTIGNASYGFDENGIMVIGWAQIADGNPEIAGYSYFADKTEGNLKLGQRISASW YATVGPEGDSANLSTGNVEWFYFKNNGHPAAGNGSVYEVQRIGDKRYLFNEKGNPVYGIQ KGKTSSNAAEAFYYCGKNKDDSSVKTGKMNLVDGEGEVITCYFENSGKGVTGVKQDYVYY NGRLQKAEKGTHYQKITLPGQNRSYVINESGRIMKSRTKYRDADGSKWSVNASGVITLDE GLDTVELLSPAVTDIS >gi|333758476|gb|AFIH01000001.1| GENE 2391 2484217 - 2484774 334 185 aa, chain + ## HITS:1 COG:CAC2928 KEGG:ns NR:ns ## COG: CAC2928 COG3859 # Protein_GI_number: 15896181 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 1 151 39 186 210 103 42.0 2e-22 MKQSTEKLAFSGVCIALSMVLGMVKVFSLPMGGSVTACSMLFATLPGFFFGTGYGLLSGF AYGLISFFLKPEFYSPAQFVVDYIFAFSALGLSGLFSRKKHGLYIGYIVACLGRFFFAFL SGLLFFAAYAPEGMNPAWYSFLYNISYISIEAAVTIAVLLIPAVHKTIYRLKGKFIREVP VPLRP >gi|333758476|gb|AFIH01000001.1| GENE 2392 2484771 - 2485649 668 292 aa, chain - ## HITS:1 COG:no KEGG:Selsp_0303 NR:ns ## KEGG: Selsp_0303 # Name: not_defined # Def: hypothetical protein # Organism: S.sputigena # Pathway: not_defined # 8 255 6 249 295 166 38.0 9e-40 MSATGVHTKRRKNWKQKLIPRLILMDDAFIRVVLLDVKCTEYILQTILGKPDLKVKKQSL QMDLKNLQGRSLILDCFCTDKNGIVYNIELQNGAKGASPKRARYHSGLIDMNLLKAGKKF ENLPESYVIFICEKDVLKENRQIYHISRVIEESGNSFPDKTHIIYLNTGKTSQDELGELI EDFYAEDPRKMHSRILSQRVKELKETNYIEEGEGNTMSSYLERLKRQWKKEAVAEGHAEG RVEGRAEGRAESEARMAKLMGILAEEGRIADIKKASESEAYRKSLLQEFQLI >gi|333758476|gb|AFIH01000001.1| GENE 2393 2485903 - 2486748 287 281 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227873202|ref|ZP_03991482.1| ## NR: gi|227873202|ref|ZP_03991482.1| conserved hypothetical protein [Oribacterium sinus F0268] conserved hypothetical protein [Oribacterium sinus F0268] # 1 213 50 243 243 109 42.0 2e-22 MTLLYLSFGKAEWSLKSLWEGIFLYRFNPVFWYFYQLILLSFCLPFMAILGILIRENTAI NRNTAINRSTAINKKTAINGAGTGSPMSPLFFCFPLLFLLLVYFQVDIPFVNEDAAFYYS FGAALALLWDGRKLFVPSFPLLFFALFCYAQTLLPHAIGILLLATVFYRLGMALFFLSLF MKKAGSILLMKRGKSILQTLSEMSFYIYASHYLFLRLWFFLQSFLETRTAVFPTGDVGRD AFKLFFYLLSPVYCLFLAYFTGKGIKRLSPRLWKLLNGGRG >gi|333758476|gb|AFIH01000001.1| GENE 2394 2486856 - 2487131 165 91 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MESTKEKGGHSANAEGEERRLLSSAHPYFSFLPSYTLFLSVLVIFVHSTHFSLASLQAVP HSGFFSASFLIKIEFFFSEFLGQIAVPGFFS >gi|333758476|gb|AFIH01000001.1| GENE 2395 2487248 - 2488471 1720 407 aa, chain - ## HITS:1 COG:CAC0819 KEGG:ns NR:ns ## COG: CAC0819 COG0462 # Protein_GI_number: 15894106 # Func_class: F Nucleotide transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoribosylpyrophosphate synthetase # Organism: Clostridium acetobutylicum # 16 390 11 370 371 380 49.0 1e-105 MADSRTSQFIERIPVGPLALMPLQSIAPLGKKVNDYLVSWRTKRESEHKQTLAFSGYQKS DYIVPTKISRFGTGEAKGEILETVRGVDIYLLVDVMNYSITYSIFGHVNHMSPDDHYADL KRLIAATTGKAKRINVIMPFMYESRQHKRSGRESLDCAMMLQELHEMGVENFLTFDAHDP RVMNAIPRDSFDNVSCTYQFIKALLLNVRDLDIDKDHMMVISPDEGGMNRAIYYANVLGV DMGMFYKRRDYTQVVNGRNPIVAHEFLGTDVEGKDVIIIDDMISSGESLIDTAKALKDRK AKRVYACCTFGLFTNGLNKFDEAYAAGVLEGVLTTNLIYQSEELLKREWYISVDMSKYIA LLIDNMNHDISISSILDPVGRINARVNEYKAHRATENAQFTIEFDDM >gi|333758476|gb|AFIH01000001.1| GENE 2396 2488599 - 2489060 335 153 aa, chain - ## HITS:1 COG:CAC3588 KEGG:ns NR:ns ## COG: CAC3588 COG1484 # Protein_GI_number: 15896822 # Func_class: L Replication, recombination and repair # Function: DNA replication protein # Organism: Clostridium acetobutylicum # 1 152 167 320 329 121 40.0 4e-28 MKDIRDYFYGYCQNYPENQGNFIFTGGTGTGKTFFLHCIAKALLDRGVSVLYFTAEGLFN HFSRLMREGIEDEFVEEVDVLLLDDLGTEFSNSFTASRFFNLLNQRILTRKTMMISTNLN FKDLRELYSDRVVSRMMSDYEIIPLYGRDLRLG >gi|333758476|gb|AFIH01000001.1| GENE 2397 2489057 - 2489554 475 165 aa, chain - ## HITS:1 COG:no KEGG:Closa_0113 NR:ns ## KEGG: Closa_0113 # Name: not_defined # Def: IstB domain protein ATP-binding protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 145 1 145 331 97 34.0 2e-19 MALTAEQFHEIQEILSERRFRAEKEALEKQREVLEKVSGYADLDEKLRTLSISAMEKAQE GDAEAIRALRPAIQKIREEKRVLLEKAGYSPEDLEAHYSCTLCRDSGIFEGKKCRCFMKL QGDILYKQSKMGEILERENFPVFSWNALTIRRGRHRPAIRRLGNI >gi|333758476|gb|AFIH01000001.1| GENE 2398 2489545 - 2490432 723 295 aa, chain - ## HITS:1 COG:no KEGG:Closa_0112 NR:ns ## KEGG: Closa_0112 # Name: not_defined # Def: primosome, DnaD subunit # Organism: C.saccharolyticum # Pathway: not_defined # 3 239 1 207 345 121 32.0 4e-26 MEIQFQEGIKAEITCVPNAFIDEYLGEASGEYVRVYLYLLRHLRENLKIHSIADALNLTD YDIKRAILYWEKRGIFKEGTAKAVEEEIRSEEAARLSEEVLHRKQANNFTKLSFFAEKNQ KHLPLAEKNLPLAEQNVSYTQRNLLPIEEKKQEINEEEFEGILYVAQYLLPGGVSRSHIQ KFEYMVEYLGMSSELIEFLLDYCASIDKTSPRYIESVALDWHEKRIQTVKQAKNLIEQFD LTKKSRKQNARQDAGKPEEKKNRFVNFKQDEVDYDSLAKEKALQLLRQGGSTEWH >gi|333758476|gb|AFIH01000001.1| GENE 2399 2490898 - 2491695 631 265 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227873035|ref|ZP_03991330.1| ## NR: gi|227873035|ref|ZP_03991330.1| hypothetical protein HMPREF6123_1269 [Oribacterium sinus F0268] hypothetical protein HMPREF6123_1269 [Oribacterium sinus F0268] # 1 262 1 268 273 211 51.0 4e-53 MKAKEFLIRAGKLLSAVLFLSAGLGMVAKAAESTSVKIPVKVNISGNAPEETYKITMEVD PASENAAITPLASPSELTVTSAGPQQHELNFNEMTYTRKGDYRYFIKQTAGNKSYFTYDQ TVYTVLVKVMEFTKDANDNPVPPYLAAVALVGTGEDLAKKNEIVFNNSYSRGSTPGNPGG GGNRPPSPGTNTPDPKVPTVQGENRPLITTPDVTMKKPDVLGVLRQVATGDGSVMALYGM FALVSMISLLFWGLGQKKKQKKNIQ >gi|333758476|gb|AFIH01000001.1| GENE 2400 2491713 - 2492456 753 247 aa, chain - ## HITS:1 COG:SPy0129 KEGG:ns NR:ns ## COG: SPy0129 COG4509 # Protein_GI_number: 15674344 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 12 245 10 236 237 152 33.0 4e-37 MDVVASAARFGDKILSFLAIILMVVMLSFGGYSLWDTYVTMSGAFLKNDLLKYKPSLDNP EQTRLSLQELMAINPDTRAWITLDGTHIDYPMVQGKDDMEYVNKDVTCEFSLSGSIFLSA KNKADFSDPYMLTYGHHMDNGGMYGDVMEFIKKDYFDKHLTGHLFLPDGRARKLDVFAVI ECDAYDQMIYRTDNKNGHVMELVEYLKNHATNFRDIGMKESDQIMALSTCVSLETNGRAV VMVRVNP >gi|333758476|gb|AFIH01000001.1| GENE 2401 2492710 - 2494041 1335 443 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227873038|ref|ZP_03991333.1| ## NR: gi|227873038|ref|ZP_03991333.1| conserved hypothetical protein [Oribacterium sinus F0268] conserved hypothetical protein [Oribacterium sinus F0268] # 1 443 1 393 393 239 46.0 3e-61 MRKNLNKLATLALSGMMVMSMAVPAFAFPANELTIPFTKKLYVDGETLAPQTAFDFEITP ATANGKWKYQVKQGAVTKEEEVNTVPGPAGGVIVAEKATFAPTVAPNLKFKDDEENVNGK VYPYFTANAKFKIVESEFATKPYGTYEYDLVEKDSEYEGVKYSASKFKLYVMKYHMTEGG QEVDHLITKVVRVEAGNTKLTEEQKKTALGEKVSGISNNYGNPTPPPENPDTPPVTPPND DKPNDSTHVVHIAKKIEGNGSNLSKAFKFQVSVIPASTTAVTTGEREKYAVINEGSDNVV GNHIVASAAGEELTTDNHKIVTFEAGQGKGIKITGLTKGDKVVVKEIDSDTSYTVTAGED ESNYANTGSKEAGSRINKTAIDVDNDRQLDFNVLKNEAKVVVTNTKGNITPTGIVMNVAP YALMLAVAGGLGVVFVNRKKEEE >gi|333758476|gb|AFIH01000001.1| GENE 2402 2494471 - 2499576 3031 1701 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227873039|ref|ZP_03991334.1| ## NR: gi|227873039|ref|ZP_03991334.1| conserved hypothetical protein [Oribacterium sinus F0268] conserved hypothetical protein [Oribacterium sinus F0268] # 5 1698 6 1700 1702 1191 46.0 0 MKTNQNNHIMNMNKGMKQKLSMLLIACLLFTGYRGLTIPGRAEQGNKEQNNEISVSGTQV KVQLLGEDLRRAAKEAIEKGERVDDSVLKGYSKDEELQKSYAGIFSLDKEVYEIPLDSIS EGLSESLAEEEAGLQVFVERDAQDLDNLVRKESKESLLLYDGKSQLEQLFPKGEETESVK KEEEENLASDSNLVRNTELTGSELITFLYKNKADHRITFQLSVDGNKYPKVTVSPKTQLF KELVDKLKKEEKKVPVETTKAPESKIEESTEAKNTASEAQLAESTTSSEEVKETAKQAAS KEETTEASVTEASTEDSASKVSIVSEEKKEETSEQETSEAAVKAEEKNEESAETETAAEA PVKKESTKEVEVKFSGFLQDVISHYEEFLGELVSARFSQYSLNELGRKSQNVEIEGFATV EVFYEEAAFDKEVVLEAKRLFKPEEETEGEKLSEEQVKVLKEHSIYDDAASLDIRFVDKK DSATEVEPKSPVSVRITIDKKALPETVSPDTISIHHLVENDETKEIEKVDTVVQANASKK LIVNDDATYNSEDEKELENSKSTLKTNNGDSDEEVKKETITKEFTVDSFSLYQITWTDDE LANCPPIRFHYVDKNFNEIWPTKRVEIKKRSGIYGSQLYVGQTFFNRSPNPDSTPSGDAL KSFYGYKFVEVYPFKLPYDNLQYINNGNSTDYFDIQYKYDSSNPPKEFGEGVKYINDTGF MTWKSYRNGEHDTRWYWYNSAGQIQYCGTYDFYFVYDIDPVTVTKIDDKEVEPRNEKFIK DNLDGTYDLTLTGQVKNQTKEELDIIFLLDTTKSMNLPFETIEGLGDYTEDDFASKKSLV SRKDKTIEYINAMVDDISGDKNYDAQFALVGFGGDRKETVAQGGYFYWGGPTRDRRILAD EKKSKVKPESITITDTPFNDTTRVYEFTSSAEQFKRNLKNLPETESVNTGANYVAAIIGM NYLLTGDEYQKLQGKIVGANKARPNAKKIVVMLADGDPMYSYALEDGQYDDTTVNTGFNK NYSSVFETVTNLKRGYSYGNGKTFNRVGLNQARGLLAKIDRYSAFYSIGIGNTKNWPHLK ELTEAHAFDQDSKWASFGSKFIRAGSALAKNVDHKVYDGSTPELLKSTFIELKNTIAPKA TNLTINDTLSENVTFVKDTELKVEVFKMKSNGVEPDGNALTEAQLKDMGLKKFILEKPLA SLEQGGKIKLSTDPADFALPGGYEIRLTATIKPSVKAYEKLRNGQASKDEGDERTDLQDI FRREEISLPSEFSNSAMYGTSAKKFGLYTNDEAKFGYKWKGQDKSKDYKRPIIKVNRADL KIEKTFVGLDKKLVNNSSGVTKFGKEIVQQLKFDILRSENKPGTNPAKSFLTINFEEAPW ADALNDPEVSRNGKKVPVTIDGENHEVTILLINEANGKPKLSITVNNLDSEKYDYHVWEY INGLENNKAKAVLDPDEPGTQYRYIGGGGPNGPKSIDNTACGIFKFQNSYQKEQPKKTVT IKKIVQEFGGTAYSQEALNKKFDFYIALYKYNGSEYEALNYREIETIINKWIAENPGKGD IVTGRYKDEIPVPIGDNKTVKTYLPKISLKHGESISLDLDANLYYKILESKDEGYEVAKA VVNNSGHESPITIKEVHINECDYSITEIMDQGKEFTFKNPRITLVPTGLRGDITPYLFSI FGFTMMAGMYLTIRKRKRVEI >gi|333758476|gb|AFIH01000001.1| GENE 2403 2500296 - 2500976 542 226 aa, chain + ## HITS:1 COG:CAC3054 KEGG:ns NR:ns ## COG: CAC3054 COG0279 # Protein_GI_number: 15896305 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoheptose isomerase # Organism: Clostridium acetobutylicum # 35 226 27 191 196 119 35.0 6e-27 MFKKEGDGMTIQEEKAYQELQILEERYPVLVPLHKEIAEAFSMMRDSFERGGKLLLCGNG GSSADSDHIVGELMKGFCKKRRISEELSSELKTLYGEAEAEYFTKHLEQGLPAIAFSAQT ALHTAYSNDQDEALFYAQCLLGYGKKEDVLFGISTSGNAKNVGYALKLAKAMGIKSILLT GKDGGTGKELADLSIIAPSKETYQIQELHLPIYHCLCLMIEAYFFG >gi|333758476|gb|AFIH01000001.1| GENE 2404 2500995 - 2501309 244 104 aa, chain + ## HITS:1 COG:no KEGG:bpr_II167 NR:ns ## KEGG: bpr_II167 # Name: not_defined # Def: hypothetical protein # Organism: B.proteoclasticus # Pathway: not_defined # 1 99 1 102 108 81 55.0 8e-15 MAMKKYNLDKNSKLTDEQFLELKEAALRPLSFDEDCPELTDEELARFKRIAEINKEERRK QSVTLRLSPHALKKAKSLGKGYTSVLSRILESALDDNELLKKSL >gi|333758476|gb|AFIH01000001.1| GENE 2405 2501304 - 2502017 653 237 aa, chain - ## HITS:1 COG:CAC3053 KEGG:ns NR:ns ## COG: CAC3053 COG0241 # Protein_GI_number: 15896304 # Func_class: E Amino acid transport and metabolism # Function: Histidinol phosphatase and related phosphatases # Organism: Clostridium acetobutylicum # 2 218 1 166 181 130 34.0 3e-30 MLKKTVFLDRDGTINEEVSYLHKAEDFRFLPGVIEGMKLLYEHGFQLVVITNQAGIGRGY YTEKDAELLHRYMREELRKQGILLQGIYYCPHHLEGLPPYNTDCFCRKPKAGLFYQAEWD MLTEERNSAGKTIEKELSGIESVAHTIQIHSPYRLTAREEAELEEENRTLPDRKSWLSSS YMVGDKLLDCLAGGNFGVNPILLGTGYGQEELKKAKKEGKQDFSYFPTFLDAVKAIL >gi|333758476|gb|AFIH01000001.1| GENE 2406 2502011 - 2502730 601 239 aa, chain - ## HITS:1 COG:CAC3056 KEGG:ns NR:ns ## COG: CAC3056 COG1208 # Protein_GI_number: 15896307 # Func_class: M Cell wall/membrane/envelope biogenesis; J Translation, ribosomal structure and biogenesis # Function: Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) # Organism: Clostridium acetobutylicum # 1 237 1 233 234 190 45.0 2e-48 MEAILLCGGLGTRLRSVVSDRPKPMADIAGKPFLHYLVKMLSESGVKHLIFALGYMGEQI EAYFQSGEDYGLSISYSYEDSPLGTGGAIRNALFHVSGENVLVLNADTYFHTDYESLLRE QLKNKAAMTIASRKIEDISRYGAILKDESGRILRWNEKMSSDQAEAPRPGEINGGIYVMQ KSLIEKIPEGKQSLENDCIPAWLEDGLYLQAIPSDGYFMDIGIPEDYAQFREDVESGKC >gi|333758476|gb|AFIH01000001.1| GENE 2407 2502819 - 2503001 58 60 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MISSSFSILPRFLLLYEIVWILSHHLSPQFCLLGIYHLIYHLIFTFFGIYHLIYHLIFTF >gi|333758476|gb|AFIH01000001.1| GENE 2408 2503076 - 2503372 94 98 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MILGLYVILAAYCDFAAVGIRGNLSPPVLAKNKETAVFRLLSARTDFSSEKSSCSGPTSE GICFAKQSEQWATEPMLSQGEVSGSVPLFQQLQNAVLA >gi|333758476|gb|AFIH01000001.1| GENE 2409 2503378 - 2507067 3343 1229 aa, chain - ## HITS:1 COG:XF0885 KEGG:ns NR:ns ## COG: XF0885 COG0438 # Protein_GI_number: 15837487 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Xylella fastidiosa 9a5c # 864 1215 82 429 443 132 28.0 5e-30 MTFSEYKGNLIDWIYFFPAEGGLERDARVLLLSDKETEEMFASRLKRRVKRLSLRLEEGQ YDYILIPNLTKRLLTLFQDSLEFLLSSLMEKYLVPGGEIVLGIHNEKSMESLATEYLEKE LAYTNLLELQSIEKVLLTKYEKGEGRVYFPLPSLDYPIHFYTKDRLPKEGEEGKSIIALS EEGVFPAFAPCFLYRFRKDTAGIRGMKDIHSKRVDYIKYNSSRKPEYAIKTEILTEKKGE KFVLKEGITKEANAHIESLPEKRKLMEAFFADRNVSVLEEMQFHRAYESSDALSYIAYPF VKGKSISEILGELISDGKAPVKEITEALVLLLGREEWIQPANYDLLFENVLMVQDKAVLI DCEWVFPEGVERSFLEYRILHYWYESYKHKLRYRDEESFFRLFSVGKPELLAAEKKEREF QEEVHGESEESNIWAYRSQRFSPENFRKQKEVIEEKEQIIAHLQEDIKDKDVALKKEREV LRLTQVHVGNLEKVISTHERDIAQLQTEKAYFEKHQSLYSRVRRKVSSAFNRRFPEDSRR RLILHYITQTFLHPIRTMLLYLLPDGRNRILGHFKIGKAYIEGGKVRFEKMEQPKVSIII PCYNQIHYTYRCLQSILAHTSQEETPYEVIIADDVSTDATRDLRLFSENLVIARNKENMG FLKNCNQAAEVARGEYIFFLNNDTEVTEGWLSSLLELMERRPDAGMVGSKLVYPDGRLQE AGGIIWSDASGWNYGRLQNPDDPEYNYVKEVDYISGAAILIRTSLWKEIGGFDELFAPAY CEDSDLAFSVRKHGFKVLYQPRSKVIHYEGISNGTDVEGSGLKRYQKVNQEKFKEKWKEE LKKQSVNTGNPNPFRARERGQGRRYVLFVDHYVPTFDKDAGSKTTYQYLKMLTDKGVIVK FLGDNFLHEEPYTSALEELGIEVLYGTKMQGDIWNWMERNKDMIDVAYLNRPHIATKYID FIKENTPWKIIFYGHDLHFLRLQREYELEQRPELLEEIQYFKNMEFSVMGKAEMNYYPSS LEVEEIHKIDDSIPVKAITAYVFDKPAAVEKIGEEREGILFVGGFAHPPNEDAVLWFSRE ILPFMKRQLPELKFRIVGSHVTEKVKELEKIEGVEVLGFVSDERLHELYQESRLVIVPLR YGAGVKGKVVEALHEGAAVLTTSCGAEGIPHAKEVMVVEDDPRKFADEAVLLYRNLPRIR EYSKKATEYIAEYFSPDAVFKGIKDDFGV >gi|333758476|gb|AFIH01000001.1| GENE 2410 2507064 - 2508434 1402 456 aa, chain - ## HITS:1 COG:PA1386 KEGG:ns NR:ns ## COG: PA1386 COG1134 # Protein_GI_number: 15596583 # Func_class: G Carbohydrate transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: ABC-type polysaccharide/polyol phosphate transport system, ATPase component # Organism: Pseudomonas aeruginosa # 3 408 4 366 422 246 36.0 6e-65 MENEELISVKKVSKVYRLYDRAIDRLLESVSIRKKSYHKDFFALQDISFSVKKGEAVGII GTNGSGKSTMLKIITGVLTPTSGSVETKGTVCALLELGAGFNQDYTGIENIYMNGTMMGI SKEEMDKKLPDILDFADIGDFVYQPVKSYSSGMFVRLAFALYISIDPEILIVDEALSVGD VFFQAKCYHRMDELKKKGTTILMVTHDLGSVMKYCDRVILFNKGEKVGEGLPGEMVDQYK KILAGKNPAAEKFVDEQDFLGDGTTAGTIGQEKAGQAKEEAVESESSKDAETDLSHLMKD EMSINPSAQLYGNGKAEIVDFGIFDNEGKLSNILIKGENFTIRERIRFYDDIASPIFTFT IKDKRGMDLSGTNTLFEGENIPGVKAGDEYICSFTQKMNLQGGEYLLSISCTGFEGGEHT VYDRKYDITSITVLSNKNTVGIYDMESKVTLERHDA >gi|333758476|gb|AFIH01000001.1| GENE 2411 2508573 - 2508845 434 90 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227874245|ref|ZP_03992444.1| possible ribosomal protein S18 [Oribacterium sinus F0268] # 1 90 1 90 90 171 92 1e-40 MAFQKSDKSGSARPRRAGGGFRSRKKVCAFCGEKSKPVDYKDVGTLRKFISERGKILPRR ITGTCASHQRAITTAIKRARHIALLPYQVD >gi|333758476|gb|AFIH01000001.1| GENE 2412 2508909 - 2509370 502 153 aa, chain - ## HITS:1 COG:CAC3723 KEGG:ns NR:ns ## COG: CAC3723 COG0629 # Protein_GI_number: 15896954 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Clostridium acetobutylicum # 1 152 1 144 144 94 39.0 8e-20 MNRVILMGRLVRDPEIRYSQGENSMAIARYTLAVDRRGRRNQNDGQPTADFIRCVSFGQR AEFAEKYMHQGMRMLVSGSIQTGSYQNKDGQTVYTTDIIVDDQEFADSKGQGGGNGSSYS RESNSPFMGGTDDLSEGFMSIPDGVEDEGLPFT >gi|333758476|gb|AFIH01000001.1| GENE 2413 2509393 - 2509731 526 112 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227874247|ref|ZP_03992446.1| possible ribosomal protein S6 [Oribacterium sinus F0268] # 1 112 1 113 113 207 92 2e-51 MNKYELCVVLSAKLDDEERAAAIEKIKGFITRYNGTVVEPIEEWGKKRLAYEIQHMKEAY YYFIPFTGDANTPNELENQVRIMEPVIRYLVVKPEETAQAKTTEHAAETVAE >gi|333758476|gb|AFIH01000001.1| GENE 2414 2509958 - 2510605 570 215 aa, chain - ## HITS:1 COG:no KEGG:Closa_0228 NR:ns ## KEGG: Closa_0228 # Name: not_defined # Def: GCN5-related N-acetyltransferase # Organism: C.saccharolyticum # Pathway: not_defined # 12 135 8 133 349 80 33.0 5e-14 MTRKILLLKTPEEQERTKALYREIFPEDTEAFLDFYYKERPKRILAMEEDGQIIAMLHLN PFLLSFFGKEITASYIYAVATKKEKRRQGIMGELLRYAFQLLKEEGEVFCILIPVAESIY SPYGFRTVAKLSKEESEAEEGINVLYAVPTKALLERRKKEALLDSEEDALPENPVLMMKI LNKPLFLSYTGYPDESEEELLRRLSGERIHFSDDI >gi|333758476|gb|AFIH01000001.1| GENE 2415 2510580 - 2511590 950 336 aa, chain - ## HITS:1 COG:HP0292 KEGG:ns NR:ns ## COG: HP0292 COG4866 # Protein_GI_number: 15644920 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Helicobacter pylori 26695 # 107 310 73 290 290 100 38.0 5e-21 MQDAKKLQFSVLRAEDSKHIAPYFYRRPNRTCDSCALDSYLWREYCDIMVAEEEDKALFL LMDREGEKYTAMPYCDEEDLPIYFQRIEEYFNQVLNQPLKIYLADEEAVKFLKLEENPRY LVKEEEDFKDYLYDAEELRTLPGKRFHKKKNLVNKFKREYEGRWEYRSICCSEKVVVWEF LDRWYQSRVKEEGNGEDTLEYEIKGIHEVLQNCMSIDHYIGGIFIDGRLEAFSIGAYNPR EEMASISIEKGNPEIPGIYQVINQEFLLHEFPQAKLVNREDDMGLAGLRKAKESYNPIDF ARKYMVVQKDFKGYEDFVVDKFEEEVMQYDEEDTPS >gi|333758476|gb|AFIH01000001.1| GENE 2416 2511804 - 2512547 766 247 aa, chain - ## HITS:1 COG:CAC0306 KEGG:ns NR:ns ## COG: CAC0306 COG4123 # Protein_GI_number: 15893598 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Clostridium acetobutylicum # 2 243 8 243 244 197 41.0 1e-50 MERIDDLQCKGYRIVQDTEAFCYGIDAVLLSAFAKGAVKKGNAVLDLCSGNGIVPLLLAA KTEAGKLVGVEIQEEAASLARRSISLNREEERMEMLTGDLCHIEELRMKGGERLAHRFQV VTANPPYMQSDLQNPDSKKLIARHEILCRFQDVAKAARFALDSRGKFFIVHRPKRMAEII SILRENKLEPKRLQMVHSYLNGEAKLFLMEAGKDAGVELRILPPLVVYREDGEYTDELKE IYGIAYP >gi|333758476|gb|AFIH01000001.1| GENE 2417 2512551 - 2513390 659 279 aa, chain - ## HITS:1 COG:CAC0301 KEGG:ns NR:ns ## COG: CAC0301 COG1774 # Protein_GI_number: 15893593 # Func_class: S Function unknown # Function: Uncharacterized homolog of PSP1 # Organism: Clostridium acetobutylicum # 1 270 1 270 303 308 55.0 9e-84 MTEVIGVKFRTAGKVYYFSPKGVSFSRGEYAIVETSRGVEYGEVLLENQEITEDKIVAPL KDILRKATEEDRVQYEANHALEREAYETCQKKIKEHGLEMKLIDVEYTFDKGKALFYFTA EGRVDFRALVKDLASIFRTRIELRQVGVRDETKLLGGYGVCGRPLCCHSFLSEFAPVSIK MAKEQGLSLNPSSISGVCGRLMCCLKNEEEVYDFLNSKLPALGEFVTTREGLKGEVISVS VLNQKVKLIVNLEKEDEKELREYSVSDLKFKPRRKMDLE >gi|333758476|gb|AFIH01000001.1| GENE 2418 2513403 - 2514287 665 294 aa, chain - ## HITS:1 COG:CAC0300 KEGG:ns NR:ns ## COG: CAC0300 COG2812 # Protein_GI_number: 15893592 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, gamma/tau subunits # Organism: Clostridium acetobutylicum # 84 292 71 313 314 72 26.0 9e-13 MKEIKISSNRIHNAYLLLGQEEEDLVNMANRFAITLLSEEKHFQEKGFATKEQYRENVAL RVEKGEHPDCIVVDFQEKAGGGKKSSISIEQIRTEVKGTADISPKEGEYKLYLIKHSDTM TVEAQNAILKTLEEAPDFVVILLLAQNETKLLDTVLSRVVKVFAGEMDIEKRLRFFSQNP ALIKLLPFLRELSFKKQQEMQEFAEELSTVPAEDLFCFLDIILRDVLCYKCTGNPALLYE KEGIPCLAEMGQRYSFRLLGKWGEYLERYKRGKTYNVQISLQIMDLFFLLHEEG >gi|333758476|gb|AFIH01000001.1| GENE 2419 2514310 - 2514981 581 223 aa, chain - ## HITS:1 COG:CAC0298 KEGG:ns NR:ns ## COG: CAC0298 COG0194 # Protein_GI_number: 15893590 # Func_class: F Nucleotide transport and metabolism # Function: Guanylate kinase # Organism: Clostridium acetobutylicum # 2 208 4 190 195 139 40.0 4e-33 MIYYLMGKSASGKDSIFHKLLEKGHFRRLIPYTTRPMREGEAEGQEYHFISEEEFEKLIS TGEMAEHRIYDTVFGKWYYGTVLPEEAESAVQADKPERTAVTEQAAETERAAKKRYLAIG TLESYLQLKEKLGERGIFPLYIEVPDEIRLERAFLRQEGGGKKTREEILRRFKADDEDFS EDKLAQAGIRKRYPNTDLTECTKEIEQDTVLSECTREIEKDTE >gi|333758476|gb|AFIH01000001.1| GENE 2420 2514981 - 2515511 564 176 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227874255|ref|ZP_03992454.1| ## NR: gi|227874255|ref|ZP_03992454.1| GL10540 like protein [Oribacterium sinus F0268] GL10540 like protein [Oribacterium sinus F0268] # 1 174 18 213 215 94 45.0 2e-18 MKDKRNKRNRVDEEANFIGDVVRLLFALSIAVVTVVAGFILFKNISGFSLPNLKETEVST EQTKDAVVITEAAKETKKESREETTEQTEESKETESTKESTTEETKESTKESETKKESST AKENGVVGESPTAATKKAESTKAETSSGKAPSDHVAIGEAPKAADGDVVEEGPGVH >gi|333758476|gb|AFIH01000001.1| GENE 2421 2515591 - 2516406 586 271 aa, chain - ## HITS:1 COG:L0192 KEGG:ns NR:ns ## COG: L0192 COG0340 # Protein_GI_number: 15673885 # Func_class: H Coenzyme transport and metabolism # Function: Biotin-(acetyl-CoA carboxylase) ligase # Organism: Lactococcus lactis # 15 269 3 246 250 123 35.0 3e-28 MIDLNEKQILAYFKEKLISSPHQEKLPLPSVKIFPETGSTNTDMKESLKKEGEAPEGTVY LTDCQSGGRGRQGHSFYSPKGMGIYFSILTRPKESSGDALTITTHAAVAVVRAVKELYDI SLSIKWVNDLFLNGKKVCGILAEGKFCPALEYCIMGIGINLFTPEGGYPAEISEIAGSLF GEYQEERFFDFDRNRLMATILYHYFCICDEKEVLPEYRENNLVLGRRVLFSENGIEKEGV VTAITKHGELFLSLDSGASQILLSGEVKFVS >gi|333758476|gb|AFIH01000001.1| GENE 2422 2516403 - 2516762 241 119 aa, chain - ## HITS:1 COG:no KEGG:Closa_1095 NR:ns ## KEGG: Closa_1095 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 13 106 9 102 118 90 50.0 1e-17 MNLPEQGEAAKRVLCGANSYIEKYFFNPRFQNLPEEVQESLQKIAVVYTEEIGGIFILQF DEEGKLDMASIKEDDDFLYDPIGAELKRKQIFKDYKELFSKLEEYYAGLLKIEKEKAKS