Prediction of potential genes in microbial genomes Time: Wed Jul 20 19:20:25 2011 Seq name: gi|302034483|gb|GL383152.1| Propionibacterium acnes HL005PA4 genomic scaffold Scfld0, whole genome shotgun sequence Length of sequence - 97190 bp Number of predicted genes - 108, with homology - 100 Number of transcription units - 66, operones - 28 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 55 - 909 865 ## HMPREF0675_5240 hypothetical protein 2 2 Op 1 . + CDS 1193 - 1504 182 ## COG5450 Transcription regulator of the Arc/MetJ class 3 2 Op 2 . + CDS 1482 - 2045 406 ## PPA2178 hypothetical protein 4 3 Tu 1 . - CDS 2076 - 3581 1295 ## COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain 5 4 Tu 1 . + CDS 3580 - 3795 150 ## 6 5 Tu 1 . - CDS 3734 - 4180 498 ## PPA2180 hypothetical protein - Prom 4222 - 4281 1.8 - TRNA 4416 - 4503 64.0 # Ser CGA 0 0 - Term 4501 - 4532 0.5 7 6 Tu 1 . - CDS 4623 - 5867 974 ## COG2244 Membrane protein involved in the export of O-antigen and teichoic acid 8 7 Op 1 . - CDS 5987 - 6469 306 ## COG0590 Cytosine/adenosine deaminases 9 7 Op 2 . - CDS 6473 - 7105 679 ## PPA2183 hypothetical protein 10 8 Op 1 . + CDS 7330 - 7956 660 ## COG0035 Uracil phosphoribosyltransferase 11 8 Op 2 . + CDS 7953 - 8696 395 ## COG3777 Uncharacterized conserved protein + Term 8945 - 8986 0.0 12 9 Tu 1 . - CDS 8733 - 9254 338 ## COG2606 Uncharacterized conserved protein 13 10 Tu 1 . + CDS 9301 - 9447 135 ## HMPREF0675_5251 hypothetical protein 14 11 Tu 1 . - CDS 9540 - 9710 73 ## gi|289425961|ref|ZP_06427708.1| hypothetical protein HMPREF1034_0795 + Prom 9520 - 9579 1.9 15 12 Tu 1 . + CDS 9655 - 11535 1456 ## COG3158 K+ transporter + Term 11560 - 11604 11.4 16 13 Tu 1 . - CDS 11590 - 12303 439 ## COG0518 GMP synthase - Glutamine amidotransferase domain 17 14 Tu 1 . + CDS 12337 - 12603 193 ## PPA2189 hypothetical protein + Term 12656 - 12686 3.3 - TRNA 12685 - 12757 76.0 # Arg ACG 0 0 18 15 Tu 1 . + CDS 12731 - 12970 133 ## - TRNA 12988 - 13077 60.0 # Ser GCT 0 0 + Prom 13209 - 13268 2.0 19 16 Tu 1 . + CDS 13300 - 15153 1028 ## COG1316 Transcriptional regulator - Term 15008 - 15047 7.4 20 17 Op 1 . - CDS 15202 - 16173 608 ## COG1609 Transcriptional regulators 21 17 Op 2 . - CDS 16214 - 17449 981 ## COG0153 Galactokinase 22 18 Op 1 . + CDS 17666 - 19375 1439 ## COG4146 Predicted symporter 23 18 Op 2 . + CDS 19386 - 19658 254 ## HMPREF0675_5264 hypothetical protein + Term 19800 - 19844 1.6 - Term 19695 - 19747 19.5 24 19 Tu 1 . - CDS 19762 - 20196 358 ## HMPREF0675_5265 hypothetical protein 25 20 Op 1 . + CDS 20195 - 20476 96 ## - TRNA 20322 - 20407 66.7 # Ser TGA 0 0 26 20 Op 2 . + CDS 20395 - 20625 171 ## 27 21 Op 1 . - CDS 20603 - 21517 337 ## PPA2198 hypothetical protein 28 21 Op 2 . - CDS 21505 - 22107 142 ## PPA2199 hypothetical protein 29 22 Op 1 . + CDS 22294 - 23295 939 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases 30 22 Op 2 . + CDS 23322 - 23492 88 ## gi|313831451|gb|EFS69165.1| hypothetical protein HMPREF9616_01008 31 22 Op 3 . + CDS 23503 - 24918 1506 ## COG0137 Argininosuccinate synthase + Term 24927 - 24975 12.1 32 23 Tu 1 . - CDS 24989 - 25216 129 ## gi|313765202|gb|EFS36566.1| hypothetical protein HMPREF9567_00841 - Prom 25350 - 25409 1.5 33 24 Tu 1 . + CDS 25373 - 26581 773 ## COG0477 Permeases of the major facilitator superfamily 34 25 Tu 1 . - CDS 26630 - 28807 1116 ## COG0025 NhaP-type Na+/H+ and K+/H+ antiporters - Prom 28901 - 28960 2.3 + Prom 29024 - 29083 2.2 35 26 Op 1 . + CDS 29138 - 29695 219 ## HMPREF0675_5273 transcription factor WhiB + Term 29708 - 29765 1.0 36 26 Op 2 . + CDS 29768 - 30523 728 ## COG0561 Predicted hydrolases of the HAD superfamily 37 27 Tu 1 . + CDS 30649 - 30798 59 ## 38 28 Op 1 . + CDS 30946 - 31854 333 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 39 28 Op 2 . + CDS 31844 - 32578 657 ## PPA2207 putative ABC transporter-associated permease 40 28 Op 3 . + CDS 32569 - 32772 159 ## gi|289427917|ref|ZP_06429621.1| conserved hypothetical protein 41 29 Op 1 . + CDS 32899 - 33492 273 ## COG1396 Predicted transcriptional regulators 42 29 Op 2 . + CDS 33505 - 34245 456 ## COG3382 Uncharacterized conserved protein + Prom 34481 - 34540 2.2 43 30 Tu 1 . + CDS 34656 - 35936 753 ## HMPREF0675_5281 hypothetical protein + Term 35979 - 36025 12.5 - Term 35967 - 36013 15.1 44 31 Op 1 . - CDS 36084 - 37568 990 ## COG1457 Purine-cytosine permease and related proteins 45 31 Op 2 12/0.000 - CDS 37625 - 37927 198 ## COG2440 Ferredoxin-like protein 46 31 Op 3 9/0.000 - CDS 37927 - 39297 162 ## COG0644 Dehydrogenases (flavoproteins) 47 31 Op 4 29/0.000 - CDS 39294 - 40172 466 ## COG2025 Electron transfer flavoprotein, alpha subunit 48 31 Op 5 . - CDS 40205 - 40966 510 ## COG2086 Electron transfer flavoprotein, beta subunit 49 32 Op 1 8/0.000 - CDS 41075 - 42241 371 ## COG1804 Predicted acyl-CoA transferases/carnitine dehydratase 50 32 Op 2 2/0.000 - CDS 42279 - 43427 556 ## COG1960 Acyl-CoA dehydrogenases - Prom 43583 - 43642 3.6 - Term 43571 - 43610 0.6 51 32 Op 3 . - CDS 43653 - 44411 303 ## COG1414 Transcriptional regulator 52 33 Op 1 . - CDS 44531 - 45046 258 ## COG1085 Galactose-1-phosphate uridylyltransferase 53 33 Op 2 . - CDS 45068 - 45856 406 ## COG1085 Galactose-1-phosphate uridylyltransferase 54 33 Op 3 . - CDS 45853 - 47127 1076 ## COG0172 Seryl-tRNA synthetase - Term 47157 - 47197 3.3 55 33 Op 4 . - CDS 47214 - 48032 1016 ## COG3861 Uncharacterized protein conserved in bacteria - Term 48054 - 48086 -0.5 56 34 Tu 1 . - CDS 48303 - 48500 130 ## gi|313765175|gb|EFS36539.1| hypothetical protein HMPREF9567_00814 - Prom 48534 - 48593 1.9 57 35 Tu 1 . + CDS 48433 - 48687 65 ## 58 36 Tu 1 . - CDS 48747 - 49478 347 ## COG2360 Leu/Phe-tRNA-protein transferase 59 37 Tu 1 . + CDS 49919 - 50179 119 ## HMPREF0675_5294 hypothetical protein 60 38 Tu 1 . + CDS 50442 - 50696 156 ## HMPREF0675_5296 siderophore-interacting protein - Term 50644 - 50686 -0.5 61 39 Tu 1 . - CDS 50749 - 51603 826 ## COG1968 Uncharacterized bacitracin resistance protein 62 40 Tu 1 . - CDS 51815 - 52333 627 ## COG1528 Ferritin-like protein 63 41 Tu 1 . + CDS 52345 - 52575 125 ## HMPREF0675_5299 hypothetical protein 64 42 Tu 1 . - CDS 52664 - 53302 266 ## PPA2226 hypothetical protein 65 43 Tu 1 . + CDS 53168 - 53413 169 ## HMPREF0675_5300 hypothetical protein + Term 53575 - 53614 7.1 - Term 53563 - 53602 10.5 66 44 Op 1 27/0.000 - CDS 53625 - 54074 747 ## PROTEIN SUPPORTED gi|50843662|ref|YP_056889.1| 50S ribosomal protein L9 67 44 Op 2 21/0.000 - CDS 54088 - 54327 384 ## PROTEIN SUPPORTED gi|50843663|ref|YP_056890.1| 30S ribosomal protein S18 - Term 54342 - 54367 -0.5 68 44 Op 3 24/0.000 - CDS 54454 - 55008 539 ## COG0629 Single-stranded DNA-binding protein 69 44 Op 4 . - CDS 55136 - 55426 487 ## PROTEIN SUPPORTED gi|50843665|ref|YP_056892.1| 30S ribosomal protein S6 - Prom 55541 - 55600 2.1 - Term 55778 - 55814 -0.3 70 45 Tu 1 . - CDS 55948 - 56331 345 ## HMPREF0675_5306 hypothetical protein - Term 56452 - 56506 4.3 71 46 Op 1 7/0.000 - CDS 56509 - 56970 486 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 72 46 Op 2 . - CDS 56994 - 58481 1611 ## COG1299 Phosphotransferase system, fructose-specific IIC component - Term 58821 - 58855 2.1 73 47 Op 1 . - CDS 58863 - 60797 1372 ## COG1022 Long-chain acyl-CoA synthetases (AMP-forming) 74 47 Op 2 . - CDS 60871 - 61668 652 ## COG0648 Endonuclease IV 75 48 Op 1 . + CDS 61780 - 62589 197 ## PROTEIN SUPPORTED gi|163797523|ref|ZP_02191474.1| 50S ribosomal protein L9 76 48 Op 2 . + CDS 62591 - 63442 461 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase 77 48 Op 3 . + CDS 63442 - 63924 475 ## HMPREF0675_5314 bacterial transcription activator, effector binding domain protein 78 49 Tu 1 . - CDS 63995 - 65188 1004 ## COG3583 Uncharacterized protein conserved in bacteria 79 50 Tu 1 . - CDS 65468 - 67726 1638 ## COG2217 Cation transport ATPase 80 51 Tu 1 . + CDS 67762 - 68100 154 ## + Term 68342 - 68384 -0.4 81 52 Op 1 . - CDS 67915 - 68307 362 ## HMPREF0675_5317 heavy metal-associated domain protein 82 52 Op 2 . - CDS 68331 - 68729 325 ## COG1937 Uncharacterized protein conserved in bacteria 83 53 Tu 1 . + CDS 68670 - 69017 173 ## gi|313803247|gb|EFS44443.1| hypothetical protein HMPREF9576_00372 84 54 Op 1 . + CDS 69201 - 70547 1305 ## COG0305 Replicative DNA helicase 85 54 Op 2 . + CDS 70589 - 71599 570 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases 86 55 Op 1 . + CDS 71746 - 72063 206 ## HMPREF0675_5321 hypothetical protein 87 55 Op 2 . + CDS 72060 - 72635 252 ## COG2094 3-methyladenine DNA glycosylase - Term 72838 - 72882 8.7 88 56 Op 1 8/0.000 - CDS 72959 - 74209 1292 ## COG0247 Fe-S oxidoreductase 89 56 Op 2 9/0.000 - CDS 74212 - 75555 1227 ## COG3075 Anaerobic glycerol-3-phosphate dehydrogenase 90 56 Op 3 . - CDS 75552 - 77186 1470 ## COG0578 Glycerol-3-phosphate dehydrogenase - Prom 77422 - 77481 3.9 - Term 77430 - 77472 6.1 91 57 Tu 1 . - CDS 77603 - 78568 1013 ## COG1052 Lactate dehydrogenase and related dehydrogenases 92 58 Op 1 1/0.091 + CDS 78275 - 79150 373 ## COG1846 Transcriptional regulators 93 58 Op 2 . + CDS 79147 - 80874 1191 ## COG0038 Chloride channel protein EriC - Term 80803 - 80831 -1.0 94 59 Tu 1 . - CDS 80877 - 82283 1022 ## COG1113 Gamma-aminobutyrate permease and related permeases 95 60 Tu 1 . - CDS 82399 - 82890 252 ## COG1846 Transcriptional regulators + Prom 83165 - 83224 1.8 96 61 Op 1 . + CDS 83263 - 84408 547 ## COG0420 DNA repair exonuclease 97 61 Op 2 . + CDS 84405 - 87011 1699 ## HMPREF0675_5333 RecF/RecN/SMC N-terminal domain protein 98 62 Op 1 2/0.000 - CDS 87071 - 88417 810 ## COG0534 Na+-driven multidrug efflux pump 99 62 Op 2 . - CDS 88417 - 88977 384 ## COG1309 Transcriptional regulator - Prom 89060 - 89119 2.3 100 63 Op 1 . + CDS 89201 - 90073 617 ## COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 101 63 Op 2 . + CDS 90073 - 90561 358 ## COG2606 Uncharacterized conserved protein 102 64 Op 1 . - CDS 90574 - 90972 402 ## PPA2263 hypothetical protein 103 64 Op 2 . - CDS 91002 - 91538 228 ## HMPREF0675_5339 hypothetical protein 104 64 Op 3 . - CDS 91535 - 92329 565 ## HMPREF0675_5340 ErfK/YbiS/YcfS/YnhG 105 64 Op 4 . - CDS 92245 - 92463 122 ## 106 65 Op 1 . + CDS 92462 - 92686 171 ## gi|313765124|gb|EFS36488.1| hypothetical protein HMPREF9567_00763 107 65 Op 2 . + CDS 92658 - 94727 1674 ## COG0171 NAD synthase 108 66 Tu 1 . + CDS 94906 - 97152 1529 ## COG0205 6-phosphofructokinase Predicted protein(s) >gi|302034483|gb|GL383152.1| GENE 1 55 - 909 865 284 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5240 NR:ns ## KEGG: HMPREF0675_5240 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 14 284 1 271 271 450 100.0 1e-125 MRVRSNPLARGRYMDISAMDPKDIPGLFDAEVVGPDGEKVGTIQQIFADEVTGAATFVTV LSQGHEYFIPVRGAEYSTSQVNVPFSRNLIETAPEASEEDDLSRDREAEVYGHYGMEPAR RSGLEISDDDDIAIAHPGRGAVSESDIVEADVVDDSEPDADEAGQDTVVTPIVVSEAGSD AEDTDDDEENRPKVLSDDHGDEEAHTVDSAPAVGLPAGAKLRRYVVTDLVTVQIPVRREV VCWEDSEGNIHDFDKVEAPEEAKRAGVPGQATWWFNDGPEAPAG >gi|302034483|gb|GL383152.1| GENE 2 1193 - 1504 182 103 aa, chain + ## HITS:1 COG:MT2444 KEGG:ns NR:ns ## COG: MT2444 COG5450 # Protein_GI_number: 15841887 # Func_class: K Transcription # Function: Transcription regulator of the Arc/MetJ class # Organism: Mycobacterium tuberculosis CDC1551 # 1 98 1 98 105 125 60.0 2e-29 MIFKRVGDSRPYPSHGYTQKKWSQLAPVQVRLDQLVTTKSTLNLANLLEDDSTFYGDLFA HVVAWHGDLYLEDGLHRALRAALQQRQTLHARVLDLNGRHDFR >gi|302034483|gb|GL383152.1| GENE 3 1482 - 2045 406 187 aa, chain + ## HITS:1 COG:no KEGG:PPA2178 NR:ns ## KEGG: PPA2178 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 187 1 187 187 296 99.0 3e-79 MAVMTFDERRHYLRMAGTPLTLLALVLLIAVAIRAGWKAVSAPIPPPPLIPCVDQDVNGE LTTQDITVSVYNSGHTRGLAGSVSKQLTNVGFVIDSVSNRQPSVKKVTIIGQDAKNPEVG LVAGYFPGAVVKSDPKRVDHEVEVVLSDRDPNFKTTAPKSVKVNGSVCLPSPSPTPSILA SPGEQPS >gi|302034483|gb|GL383152.1| GENE 4 2076 - 3581 1295 501 aa, chain - ## HITS:1 COG:BH4038 KEGG:ns NR:ns ## COG: BH4038 COG3263 # Protein_GI_number: 15616600 # Func_class: P Inorganic ion transport and metabolism # Function: NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain # Organism: Bacillus halodurans # 5 478 6 483 490 295 39.0 1e-79 MQPADLALFLGAVVVLLAAFAARIGTRLGLPALLLFLLVGMLLGPIGFGINFNDLAGAHA IGFAALVLVLAEGGLSTNWKDIRPALAPAALLATVGVGVCFGVMTLLGHYVLGLHWSVAA LLGAATAPTDSAAVFSVLRGVSLPNHLRSVLEAESGLNDAPTVLVVIALTGVATGESNAG VLPLLGSIAVQLIGGILVGLLVGWVAGKVSRRITLPSGNLYAIAAMAWAVTAYGTGAWIG VSGFSAVYIAAVVIGNGDLPYQHTTRSFSEGIAWICQIGLFVMLGLLANPDRLTWGSVGV GIAAGLLLTLVARPVAVAACTIWFGFERNERLFMSWAGLRGAVPIILATIPMASNMDRAD KFFDVILVLVVVFTCIQAPTLPAAADILGVVDPQMAKDVSIEVAPLDEIAADLLQADVPK GSRLAGVTIRELRLPRNCVVSLIIRGDRSFTPHAGTVLEQGDELLIVVPQGKRRTVAERL IEISRGGRLARWHGLRVQTAD >gi|302034483|gb|GL383152.1| GENE 5 3580 - 3795 150 71 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTSIIATEQTGSSQLRTQISDRSQVMIGMAVPRCSDLTDQTSAGASIGVLGPKTGWWRAS VVAEPYQGWVR >gi|302034483|gb|GL383152.1| GENE 6 3734 - 4180 498 148 aa, chain - ## HITS:1 COG:no KEGG:PPA2180 NR:ns ## KEGG: PPA2180 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 148 67 214 214 249 99.0 2e-65 MALSQKFDNLLGILGAGAFFIGVVVFVMAPFLIVPAVFALVFPGCSLDSPWTWQTVIVGG LVLFALGIGVSLLMGVLARVIAPLGHLVVNKVTKESLEFLVLWWFYSTLMLPVSYAFGAS VVVTIVTAVTEPILDRALQRQKHATSQS >gi|302034483|gb|GL383152.1| GENE 7 4623 - 5867 974 414 aa, chain - ## HITS:1 COG:MA4450 KEGG:ns NR:ns ## COG: MA4450 COG2244 # Protein_GI_number: 20093236 # Func_class: R General function prediction only # Function: Membrane protein involved in the export of O-antigen and teichoic acid # Organism: Methanosarcina acetivorans str.C2A # 3 358 18 378 494 124 25.0 3e-28 MTKVISGTGLAQLIAALATLYVTHHIDPADWGIYGAIMAVSQFVIPAAALRYDMAIVLPR DDSEAKRVFRLATRINAIVSGVAMAAMVPLGPYLSGLLGKPQARWWLLAVGPITFTYAQV NVVNFWANRRKRFGVIGTNAVWCQSTTAAGRIGSCAVCLGAFGQVIATFLGKCLALNNFR RQLGSDLRGIKEAEVPLRTLMRKYRQLPLLTAPNVIVDAIRQQGVNMIIMVRFSTSGYGR FSIAWTLMQMPASVINQALSQVFFQKLSVSDAGRFYQTVKKSVVRSFLIGIVPFGLLYLL IPPVLPWLLGAKFHQSADIAVALVPWLFVNFVTSPISNMFIVTRNNGIALVFAIVYAAVP LTYLNLSHLSIVGTIYQMSFIMAGLLVFYIGLALVVAKRFDQKNVKLDGEVEAA >gi|302034483|gb|GL383152.1| GENE 8 5987 - 6469 306 160 aa, chain - ## HITS:1 COG:Cgl0229 KEGG:ns NR:ns ## COG: Cgl0229 COG0590 # Protein_GI_number: 19551479 # Func_class: F Nucleotide transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: Cytosine/adenosine deaminases # Organism: Corynebacterium glutamicum # 12 154 17 159 159 154 56.0 8e-38 MAGPVPGWRQAMTQALDVARRAATWGDVPIGAVILGANGEVLSEAGNERERTGDPTAHAE VLAIRRAAEARDGWRLGDCTLVVTLEPCTMCAGTIVAARIPRVVFGAFDPKAGAVSSLFD AMRDPRLPHRPKVVTGVMAEESSALLREFFDGHRACTVDG >gi|302034483|gb|GL383152.1| GENE 9 6473 - 7105 679 210 aa, chain - ## HITS:1 COG:no KEGG:PPA2183 NR:ns ## KEGG: PPA2183 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 210 34 243 243 251 100.0 2e-65 MSRFNDNEFVPDDDVDDYDDLDDYDELSDDDDYGDDGDDDYDDDDYDDDLEDASEDEIDF VVALYNDDGERVAVPMEPMLANDFDELITQLRRLPGDAGAVGMVSIDHQFYVIVRVRGRN VQVFLSDATQANDWPIARDVADFLGEDIPDPDDDPETMGDGDMLADAGLGEFDMEAFADA DEDSDEILSDIAARVHFGPQFERAANASAR >gi|302034483|gb|GL383152.1| GENE 10 7330 - 7956 660 208 aa, chain + ## HITS:1 COG:SP0745 KEGG:ns NR:ns ## COG: SP0745 COG0035 # Protein_GI_number: 15900640 # Func_class: F Nucleotide transport and metabolism # Function: Uracil phosphoribosyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 1 205 7 207 209 204 49.0 9e-53 MDHPLVSHKLTLLRSVDTPSPVFRQLVEELVTLMAYEGTREVRIEPTTVTTPLTATEGVA LTRPKPLVVPILRAGLGMLEGMMRLIPSAEVGFVGMARDEETLQPMTYAERLPKDLSGRQ CYVLDPMLATGGSLGGTVEFLVRRGADHITCLCILAAPEGIENFRKLVRDLDVPCHLIVA GLDDHLDEHGYIVPGLGDAGDRLYGLAE >gi|302034483|gb|GL383152.1| GENE 11 7953 - 8696 395 247 aa, chain + ## HITS:1 COG:PA0878 KEGG:ns NR:ns ## COG: PA0878 COG3777 # Protein_GI_number: 15596075 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Pseudomonas aeruginosa # 9 225 25 247 275 112 35.0 7e-25 MTILRPADLRGLAALLGSQEPRAVVPPCWHWVLLLDPVVPGNLDEDGYVIGSPITPEPGM MRMFAGGRVRTISPLALNSETSRTTKVASITDKEGRRGLLHFVTMRSTWSQGGRECLVDE QDYVFMPTRSAGPSPEGAGYTGSNGFLVTEPLLVTFSALTANPYRIHWDRDFCRRAGHDG LVIHGPLKALLMAQAFADTGADFTGKRFSYRFRAAVTAPTRLTVGIEEDEAKVRRPDGTV TATATLG >gi|302034483|gb|GL383152.1| GENE 12 8733 - 9254 338 173 aa, chain - ## HITS:1 COG:PA2301 KEGG:ns NR:ns ## COG: PA2301 COG2606 # Protein_GI_number: 15597497 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Pseudomonas aeruginosa # 9 172 17 177 180 100 40.0 2e-21 MYDSVEHLPAADHPELLAATVAGRVAELPSAVVFSIDPEIADTEALCEAFGEGPETCANC VIVRGKRGDIEKYVACLVLATTRVDVNKVVRKKLDVRKASFAPIDEAVGMSGMEYGGITP VGLPAEWPIWIDPRVAEAEAVCIGSGLRSSKLIVSGGDVLSLPGAEVVAGLAN >gi|302034483|gb|GL383152.1| GENE 13 9301 - 9447 135 48 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5251 NR:ns ## KEGG: HMPREF0675_5251 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 48 1 48 48 78 100.0 8e-14 MPLMEFAGDYSWGYDPAHIFAVESAYGGHPASATLVLPPYSAIITSRA >gi|302034483|gb|GL383152.1| GENE 14 9540 - 9710 73 56 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|289425961|ref|ZP_06427708.1| ## NR: gi|289425961|ref|ZP_06427708.1| hypothetical protein HMPREF1034_0795 [Propionibacterium acnes SK187] conserved hypothetical protein [Propionibacterium acnes J165] hypothetical protein HMPREF1034_0795 [Propionibacterium acnes SK187] conserved hypothetical protein [Propionibacterium acnes J165] # 19 56 1 38 38 67 100.0 5e-10 MPISPKTIPNAARASPGFMDRIGSRSTIGWVALATACRSWLRITQESMDLIASPAN >gi|302034483|gb|GL383152.1| GENE 15 9655 - 11535 1456 626 aa, chain + ## HITS:1 COG:Cgl0692 KEGG:ns NR:ns ## COG: Cgl0692 COG3158 # Protein_GI_number: 19551942 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transporter # Organism: Corynebacterium glutamicum # 5 626 22 628 628 525 46.0 1e-148 MKPGLALAALGIVFGDIGTSVLYSLQTVFSMENHAVRPTHGDVMGIISMIFWSILLVVCV KYVIFVMRADNDGEGGILALMALVRRLMASHKGTGMTALLLGIVGAGLFYGDSFITPAIS VMSAVEGLTVANPDAEKIVLPASVVILTLLFIVQRRGTEVIGKAFGPVMATWFLTLAALG IPWIIHHPVIITALSPHWAILFSIERPAMAFIAMGAVVLTITGAEALYADMGHVGAPSIR LAWFGLVLPCLLINYLGQGAMILSHPDWIDNPFFRMAPDWATIPLVTIATMATVIASQAV ISGAFSMSSEAARLGLLPRLGVRHTSKSEGGQIYIPEVNWTLFIGVLALILIFQTSSKLA TAYGLAVTGTFLLTTSLFLVLAHRAWHWPMWALIFFGVIVGGVELSIFSANLLKIASGGW IPLLFATIVVIIMTTWRRGTAYIAKQRQDDEGPLDDFLNWMHETKPTRVPGLAVYPHPGR ATTPLALLNNLRFNHVLHEHNIIISIVVENVPHVRHVNRIEKVDLGRPTDGITYIACHVG FTDSQDVPKALALAAAKCPWLKDHLDEAIYYLSLVDVKRDEPQQGAHMAGWRKMLYITMS RNQADRTRVFRIPRTRAVVMGEAVAL >gi|302034483|gb|GL383152.1| GENE 16 11590 - 12303 439 237 aa, chain - ## HITS:1 COG:AGc389 KEGG:ns NR:ns ## COG: AGc389 COG0518 # Protein_GI_number: 15887581 # Func_class: F Nucleotide transport and metabolism # Function: GMP synthase - Glutamine amidotransferase domain # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 186 22 209 254 97 35.0 2e-20 MTRILVIVHEPSCSSGRLGQLWRNAGADVAEINAWNHPVPPIVDADALVVLGGSMSCQDD AEAPWLAPTRQLISRTVRAGTPFLGICLGHQLATVALGGQVCTSDHFCLGAAEMHLTPEG KKDPLLSVYDGHRGIHFNNDVAVVLPEDAVLLARDPTGQIEAVRFAERAWGVQFHPECTP EIFDAWTIGHGEKEWQQRLPWSEAVTVAETVRRDIDTVNAEEAFAARFQELIDPEKR >gi|302034483|gb|GL383152.1| GENE 17 12337 - 12603 193 88 aa, chain + ## HITS:1 COG:no KEGG:PPA2189 NR:ns ## KEGG: PPA2189 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 88 21 108 108 162 100.0 5e-39 MPELLQPEYRFRPTGRQLLLLSDGQVVLLSIFAHDLPLLAITVPIIVFAFALLSILRSDR LTGAGKVIWIVVCFPLVGPIVWFIAGKS >gi|302034483|gb|GL383152.1| GENE 18 12731 - 12970 133 79 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLYPLSHGRIVLCTLLNVTAFNSVMQIRVIQSPEIRLTSGFAEHQMRDTRPPRGIVDPNS RTFIRGTTSPTMHKARRPL >gi|302034483|gb|GL383152.1| GENE 19 13300 - 15153 1028 617 aa, chain + ## HITS:1 COG:lin2662 KEGG:ns NR:ns ## COG: lin2662 COG1316 # Protein_GI_number: 16801723 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Listeria innocua # 213 500 25 273 349 67 23.0 1e-10 MADASRGANSPSPRHAAQPDWMNDPEANEDTHVLRRADLRAAARPPTRSPRPRRSAAEPP VNAPQPLNEPKSRPSPARRAATAKASPASRSRRRPSRWNEEARRNHAFNTCLGWTILGAI VPGLTLSRSRAPRRRVTGLTIIGLLLIGLTIAVFFILANPTVAASIVVRPKLLTALTWGL PSLAVALVALLTFSHLDLRPQGITRGQRWVSTILVTALCTTIATPLAVAGRYAYDQDHML GRIFTDKRSGTRPSINYNQDVKAIWAAKPRVNVLLVGADDSKVRNYRAENSMNTDTIMVA SINTSNGDTSIFQIPRNTARMPFPSDSPLHRDFPNGFVGKDGDGNNPDYMANEIWSTVKA RYVDRMGATDYPGADALKLATGEALGLKIDYFVMLDIDGLQKLIDALGGVSVNINERLPI AGNTEGKRPDGYLEIGANQHLDGYHAMWYARSRSASTDYDRMGRQSCLIKAVLDQTSPQT VLTRFESIADASGQMVVSDIPQGMLPAFVDLAINMRDANINRVVFTNGKHGFFSSHPDYD LIRKQVEAAIHGVSASKNKNKPVTGASSANTHKTAMAPPSHSGLKKSPQTPAPRPSPDNH DVSQSVTDACAYNPQQP >gi|302034483|gb|GL383152.1| GENE 20 15202 - 16173 608 323 aa, chain - ## HITS:1 COG:CC0969 KEGG:ns NR:ns ## COG: CC0969 COG1609 # Protein_GI_number: 16125221 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Caulobacter vibrioides # 1 322 4 338 347 141 33.0 2e-33 MGDVAAAAGVSQQTVSRVVNNSDAVRKKTVDKVLKAMTEVGYSPNVAARSLRSGRTSAIG VLATDLSRTGELRTVQAIVDATRRSELAVVLDRLEPADDSVRSYRHAMKRMAGRVDGFII EGLELDHPEDLEVPPGIPVVMAGSPCSRFSTVGCDQASGVRTAVNYLLALGHRTVHLVSG PDYSRQAVVRRQAWQECLETNDREIPDVIIGDWTASSGRDAARYLKDAGATAVLASNDEM AAGAVIGLLDMGVRIPDDMSVVGFDDVLGNTVWPTMTTVRQDFAAVGQRLAEELLAQLQG APRKSVMVPAPLVIRESTAPPRH >gi|302034483|gb|GL383152.1| GENE 21 16214 - 17449 981 411 aa, chain - ## HITS:1 COG:STM0774 KEGG:ns NR:ns ## COG: STM0774 COG0153 # Protein_GI_number: 16764138 # Func_class: G Carbohydrate transport and metabolism # Function: Galactokinase # Organism: Salmonella typhimurium LT2 # 29 407 6 379 382 218 37.0 1e-56 MSQTPHAIAADHQTPTIGTAWSVEEGATRARHLFGGHIGGSPDGVWAAPGRVNIIGEHTD YNNGFCLPIALPHRIYVAARRRDDDKVILVSQLDDSVLTWEGTLDEIAPGSVAGWKAYTG GVAWALRQAGHGLGGFEAALVTCVPLGAGLSSSAAVECGVGLALADLYDLDLTDSDSGRI GLVNAARAAENEVAEAPTGGLDQTASLRTTEGHALLIDCDDWSVRQVPFNLATADLELLV IDTCAPHRLVDGQYEARRRACENAARILGVGSLRDVGDLGAAVAALDDEGMASRVRHVVT ENDRVTQFVKLLDTGQIREVGPLMNASHDSLRDDYEVTCPELDTAVDAARAAGALGARMT GGGFGGCAIALVDRDVRNKVATQVADSFREAGFAHPEFYVVTPGPAALRVQ >gi|302034483|gb|GL383152.1| GENE 22 17666 - 19375 1439 569 aa, chain + ## HITS:1 COG:yidK KEGG:ns NR:ns ## COG: yidK COG4146 # Protein_GI_number: 16131549 # Func_class: R General function prediction only # Function: Predicted symporter # Organism: Escherichia coli K12 # 41 477 35 450 571 108 23.0 4e-23 MPLETLINAGFVDYLILLIYFVFVLGIGLAARHQVSDSLDFFLSGRSLPGWVTGLAFVSA NLGAVEIMGMSANGAQIGIPTVHYFWIGAIPAMVFLGIVMMPFYYGSGVRSVPEFMLKRF GPAAHLVNAISFALAQLLIAGINLYLLGTIVHALLGWPLWVALIVAAMIVLAYISLGGLS AAIYNEVLQFFVIVASLLPLVIIGLHRVGGWSGLKAKITAAAEAHPDVVTPAAQQLHSWP GQALSGFGSPVMSVIGITLGLGFVLSFGYWTTNFVEVQRAMASDSLSSARKTPIIGAFPK MLVPFLTVLPGMLAAVLVPEIARMKAGEKVAGGASGSFVQYNDSVLFLIRNLLPTGLTGV AITGLLAAFMAGMAANISAFNTVFSVDIWQHYVIKDKPDGYYVKVGRIATVIATVVAIGT AFMASGFSNIMDYLQTLFGFFNAPLFATFILGMFWKRSTPHAGWSGLVVGTLSAVTVWVM SLAGVFTLPGQGTAFLAATVGFVADIIVSIVVSLFTEPKPAAELVRLVYSETPKEHLVDP LEKDLPWYRRTVPLGMTVLAITVVLNIIF >gi|302034483|gb|GL383152.1| GENE 23 19386 - 19658 254 90 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5264 NR:ns ## KEGG: HMPREF0675_5264 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 90 1 90 90 149 100.0 4e-35 MSNGTATARRNRSKVARAMDIRTVIGVLLGLYGIILTITGLVKGSDAHADLVSGMCLLVA GAVFLVWVRLRPVKVPEVAEEASESAAGRG >gi|302034483|gb|GL383152.1| GENE 24 19762 - 20196 358 144 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5265 NR:ns ## KEGG: HMPREF0675_5265 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 144 18 161 161 281 100.0 7e-75 MSPEPPIRGFIIAGVLSIVGAVLMIISIAKSWHEVVTIIFIAVLACGIALAVTAAWSMVH MKLYVDLDDKGYHIHGAGQDRRGTWDKVTKAALTESRSRLTLYHGQVGRTHIVRPGIGDP KEMDDLAVDVAHRLDESRGYRQNI >gi|302034483|gb|GL383152.1| GENE 25 20195 - 20476 96 93 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTCLVVPGGRSVTSILGIPISHHCKADMREPGPRVPHLGTGSVAARVGFEPTEVALGRFQ GGCTRPLCDLANRARPGGPILAIIHRAYSSSRT >gi|302034483|gb|GL383152.1| GENE 26 20395 - 20625 171 76 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRSRQPGTTRWPHLSHNSSGIFIVPDLDPLIPRLDVDESERGHRPVTLISDPWTTAITRF ALSRQHLSAITVFRVV >gi|302034483|gb|GL383152.1| GENE 27 20603 - 21517 337 304 aa, chain - ## HITS:1 COG:no KEGG:PPA2198 NR:ns ## KEGG: PPA2198 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 304 1 304 304 542 99.0 1e-153 MSSMKGLSLVLATSFMLSFSPGSSFASGGVSVDPDSHTVYVRFSDKGSHHKSGIKIREGA KRGTPGHGGSHHKQSNPHAGKRQPPTSPKLSKSVDRRESDAYIASSILSLASPRIPYLLG LNLSLMEPKPNRTTLSPSPVRPKVSTREEARDWSVDLATNIHLAKPVVYVEPRPSANKWN ITAVGQPLWFHNPGSERHTSSDSSRGIIVSLDATRVETIYSTGEKTVRCAHSTPRPKNAD PRAQSPDCGYIYQHPGNYTVRMTEVWQVRWRSGDQSGQIVTRRSSSKPLKVNELIGVLTQ PGRR >gi|302034483|gb|GL383152.1| GENE 28 21505 - 22107 142 200 aa, chain - ## HITS:1 COG:no KEGG:PPA2199 NR:ns ## KEGG: PPA2199 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 200 2 201 201 361 100.0 9e-99 MALVMVGLGTAACGADEDSTGATGGITPVASVAPAQSPTLTPSAEAPKFVKVTATPAPGT KQDALFLEAKKVYETYLEQIYKLEVGDGVNSVSAELQGILSEDGTEAIRKAYSEAKSRGH RVLPVKTPFSSVTVNRVSKGDDSEIAIIGCADISNWRFVNPKDGTLTPGRMRKDELSMRR IGDSLKIVEAESAEVASCRV >gi|302034483|gb|GL383152.1| GENE 29 22294 - 23295 939 333 aa, chain + ## HITS:1 COG:Rv3777 KEGG:ns NR:ns ## COG: Rv3777 COG0604 # Protein_GI_number: 15610913 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Mycobacterium tuberculosis H37Rv # 27 333 17 328 328 283 51.0 4e-76 MHVITVRPTDKTDSKGRHRPGPECIEWTEVPTPKPGPGEVLVKVKAAGINRGDLLQRQGL YPPPKGVSETMGLEVTGVISSLGQDVTGWSEDDEVIALLAGGGYAEYVIVPAGQLLPIPE GIDPVTASTLIEVTATVISNMDHVGLARGETFLVHGGAGGIGQFAIQYAKSLECTVITTC GTAEKQEFCRTLGADVALDYHEDWVAGVKDATGGRGADVILDVMGAKYLDLNVDALAIGG RLDIIGMQGGIKGELNIAKLLNKRALVTATSLRPRPLEEKAKICQRVREVAWPLYTNGSI KPAPVESFPMSEAGRAHERLESGEVLGKVALTL >gi|302034483|gb|GL383152.1| GENE 30 23322 - 23492 88 56 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313831451|gb|EFS69165.1| ## NR: gi|313831451|gb|EFS69165.1| hypothetical protein HMPREF9616_01008 [Propionibacterium acnes HL007PA1] hypothetical protein HMPREF9564_00607 [Propionibacterium acnes HL053PA1] hypothetical protein HMPREF9566_00015 [Propionibacterium acnes HL045PA1] hypothetical protein HMPREF9595_02605 [Propionibacterium acnes HL005PA2] hypothetical protein HMPREF9583_02060 [Propionibacterium acnes HL038PA1] hypothetical protein HMPREF9570_00229 [Propionibacterium acnes HL043PA1] hypothetical protein HMPREF9571_00049 [Propionibacterium acnes HL043PA2] hypothetical protein HMPREF9343_00383 [Propionibacterium acnes HL099PA1] # 1 56 1 56 56 102 100.0 1e-20 MAGPWQVVLCSRRSPDSFPVQLFASRPPADSPYLIISINFQLSQPHIHLGRCIYMR >gi|302034483|gb|GL383152.1| GENE 31 23503 - 24918 1506 471 aa, chain + ## HITS:1 COG:NMA0303 KEGG:ns NR:ns ## COG: NMA0303 COG0137 # Protein_GI_number: 15793316 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate synthase # Organism: Neisseria meningitidis Z2491 # 4 430 7 433 447 604 67.0 1e-172 MSKVITQLPVGERVGIAFSGGLDTSVAVAWMRENGAVPCTYTADIGQYDEPDIASVPGRA LDYGAEISRLVDCKAALVEEGLSAIACGAFNVRSAGRPYFNTTPIGRAVTGTLLVRAMHT DDVSIWGDGSTYKGNDIERFYRYGLLANPQLRIYKPWLDENFVAELGGRDEMSAWLTAHN LPYRDSKEKAYSTDVNIWGATHEAKKLESLHVSIESVNPIMGVKFWDPDVKIDTEEVTVS FEQGLPVAINGKEYDDKVALVLEANAIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALL HIAYERLANAIHNEDTLETYHNEGRRLGRLLYEGRWLDPQSLMIRESLTHWVASAITGSV TLKLRRGWDYSILDTTGPNFSYHSEKLSMERVEGAAFGPTDRIGQLTMRNLDIADTREKL ELYSAQGQLASHADLVGQLETGGASAIASNGDDDDDSQKTLDAAAMEVGVN >gi|302034483|gb|GL383152.1| GENE 32 24989 - 25216 129 75 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313765202|gb|EFS36566.1| ## NR: gi|313765202|gb|EFS36566.1| hypothetical protein HMPREF9567_00841 [Propionibacterium acnes HL013PA1] hypothetical protein HMPREF9574_02080 [Propionibacterium acnes HL074PA1] hypothetical protein HMPREF9580_00265 [Propionibacterium acnes HL087PA2] hypothetical protein HMPREF9585_01511 [Propionibacterium acnes HL083PA1] hypothetical protein HMPREF9587_02277 [Propionibacterium acnes HL025PA1] hypothetical protein HMPREF9589_00032 [Propionibacterium acnes HL059PA1] hypothetical protein HMPREF9593_00660 [Propionibacterium acnes HL046PA2] hypothetical protein HMPREF9604_01114 [Propionibacterium acnes HL036PA1] hypothetical protein HMPREF9605_01011 [Propionibacterium acnes HL036PA2] hypothetical protein HMPREF9611_00368 [Propionibacterium acnes HL063PA1] hypothetical protein HMPREF9616_01006 [Propionibacterium acnes HL007PA1] hypothetical protein HMPREF9617_00919 [Propionibacterium acnes HL056PA1] hypothetical protein HMPREF9597_00031 [Propionibacterium acnes HL005PA4] hypothetical protein HMPREF9598_00418 [Propionibacterium acnes HL050PA1] hypothetical protein HMPREF9600_00875 [Propionibacterium acnes HL050PA3] hypothetical protein HMPREF9606_01006 [Propionibacterium acnes HL036PA3] hypothetical protein HMPREF9608_01182 [Propionibacterium acnes HL067PA1] hypothetical protein HMPREF9609_00757 [Propionibacterium acnes HL027PA1] hypothetical protein HMPREF9613_01054 [Propionibacterium acnes HL002PA1] hypothetical protein HMPREF9614_01335 [Propionibacterium acnes HL002PA2] hypothetical protein HMPREF9620_01143 [Propionibacterium acnes HL037PA1] hypothetical protein HMPREF9564_00609 [Propionibacterium acnes HL053PA1] hypothetical protein HMPREF9566_00013 [Propionibacterium acnes HL045PA1] hypothetical protein HMPREF9573_01601 [Propionibacterium acnes HL072PA2] hypothetical protein HMPREF9594_01408 [Propionibacterium acnes HL005PA1] hypothetical protein HMPREF9595_02603 [Propionibacterium acnes HL005PA2] hypothetical protein HMPREF9596_01786 [Propionibacterium acnes HL005PA3] hypothetical protein HMPREF9569_01057 [Propionibacterium acnes HL078PA1] hypothetical protein HMPREF9610_00099 [Propionibacterium acnes HL027PA2] hypothetical protein HMPREF9615_00079 [Propionibacterium acnes HL002PA3] hypothetical protein HMPREF9572_02512 [Propionibacterium acnes HL072PA1] hypothetical protein HMPREF9583_02058 [Propionibacterium acnes HL038PA1] hypothetical protein HMPREF9590_01769 [Propionibacterium acnes HL059PA2] hypothetical protein HMPREF9592_00078 [Propionibacterium acnes HL046PA1] hypothetical protein HMPREF9601_01137 [Propionibacterium acnes HL030PA1] hypothetical protein HMPREF9337_02369 [Propionibacterium acnes HL096PA3] hypothetical protein HMPREF9338_00219 [Propionibacterium acnes HL096PA2] hypothetical protein HMPREF9570_00231 [Propionibacterium acnes HL043PA1] hypothetical protein HMPREF9568_00031 [Propionibacterium acnes HL013PA2] hypothetical protein HMPREF9571_00047 [Propionibacterium acnes HL043PA2] hypothetical protein HMPREF9581_00258 [Propionibacterium acnes HL087PA3] hypothetical protein HMPREF9586_00514 [Propionibacterium acnes HL083PA2] hypothetical protein HMPREF9579_00370 [Propionibacterium acnes HL087PA1] hypothetical protein HMPREF9563_00783 [Propionibacterium acnes HL020PA1] hypothetical protein HMPREF9588_00033 [Propionibacterium acnes HL025PA2] hypothetical protein HMPREF9343_00385 [Propionibacterium acnes HL099PA1] # 1 75 15 89 89 120 100.0 3e-26 MTNSVCILVMAMKRNDGIQPKMIAMVATGVLPLSSDANEAMLKAAHKMTAKIMDRAGRRR VITRSGSALRDESPF >gi|302034483|gb|GL383152.1| GENE 33 25373 - 26581 773 402 aa, chain + ## HITS:1 COG:mll7465 KEGG:ns NR:ns ## COG: mll7465 COG0477 # Protein_GI_number: 13476206 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Mesorhizobium loti # 22 396 23 389 407 72 23.0 2e-12 MHGYRDVIAIREVWTTLLLAALIRIPIFSLGIVMSVHVVSSLHLDYVRAGAVTTVVTVAT MISGPWRGSMVDRRGLRRTMLPSLITTTIAWGLCPWLGYFPLLVLCAIGGLWNYPIFTIP RQVLMAAVPASRRRAALSLDSVTVEICYMIGPTVAIIAATTIGTRITITACGFVAAIGAI GLMVLNPATTEPSEDSPARPATPASAAPIVPAPHSRKMAWLSPRSASILFAVVATGFCLG GLELTAVAEMRSMGHPEMIGWVLAASGFGSAIGGTLYGALPRGASTALLLVFLGTLTALP ALSRGPASTAILLFVGGVFCAPTITSSIDALTDLVPADSRGTIIGWQGSCLNGGTALAAP LIGAIMDATGWQWGFLVAGIAGAVIGATVWTAERVVRKRQAV >gi|302034483|gb|GL383152.1| GENE 34 26630 - 28807 1116 725 aa, chain - ## HITS:1 COG:PA3739_1 KEGG:ns NR:ns ## COG: PA3739_1 COG0025 # Protein_GI_number: 15598934 # Func_class: P Inorganic ion transport and metabolism # Function: NhaP-type Na+/H+ and K+/H+ antiporters # Organism: Pseudomonas aeruginosa # 14 432 17 408 417 260 39.0 7e-69 MDAATYMALVLVLAVGAQWLGWRLRLPALLFLLVIGFALGQWVTPDEIFGRKLLFDGVNL SVAIILFEGSLGLKLREVRDLGRPIFQLCTVTAGLAWVLITGAAMALGFDGRVSLLLGAI LIVTGPTVINPILRQLRPTRRVSALLRWEGIVVDPLGAILALLVYQAITSIDGSSIGQGV LNLGLTLLVGLLFAGPIGWIVTAMMRRHLIPDFLQGVIFVGVAVGTCVGANVIREESGLV AVTMLGIYLANQRNLELEPVIEFKEHLQVLLVGVLFIMLAGRVTPSQILDILSAGLIFVA LLVLVIRPASVLLGLVGTETTRQERTLMSFMAPRGIVAASVASIFAMQFSESADHVREQA KQIAASDPEHSKRLFSFANQIAGMASQVDRLVPLVFLVIVCTVAIYGLGIGRLAEKLGLA SASPRGVMFAGSPAWTIDTAKTLRDFDVPTLIVTRRAYDLYAVRKAGLRCEAADFLSEYA TEDMDLAGIASMVACTPDDDTNSIASVHYRRALGRANVFQLERMDERDDGDATTGTAQIL KARTAFDPPTSHSAMDKMWRNGKRVRRVKLDENRNWEMFREAMPDAVVMFVVKPSSVNVA TNGMSAPKEDDTIIYLGDEWKDAPEPVAAQEEQPRRQTMSVPSSEEAVRDRIDADRRAAE GKNKAAASATAGDPADTTVDHGDKGEKPEQTSEASGGVEDPVRPRFDELSPGRPSPVSAD SPSEW >gi|302034483|gb|GL383152.1| GENE 35 29138 - 29695 219 185 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5273 NR:ns ## KEGG: HMPREF0675_5273 # Name: whiB_3 # Def: transcription factor WhiB # Organism: P.acnes_SK137 # Pathway: not_defined # 1 185 4 188 188 317 100.0 1e-85 MNDRTLPSCANLRAVFQHPLLEGDSTAATPDDQQLERTLQARARAACSTCPLFEQCLENA ILDHDVAGFAAGTTPRQRSRIRSYLGVKVRPDDLESFAGIIGRGHQVATQDVMRLRRAHP DQPLSFIADRLGCSLSTVKRHLRRARDTSLAPRRERSSRVTATRLAAAYESVTGRPHPGR ATLAA >gi|302034483|gb|GL383152.1| GENE 36 29768 - 30523 728 251 aa, chain + ## HITS:1 COG:SP0923 KEGG:ns NR:ns ## COG: SP0923 COG0561 # Protein_GI_number: 15900803 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Streptococcus pneumoniae TIGR4 # 1 250 4 267 269 99 31.0 6e-21 MVALDIDGTLVNHQGELPHAVREAVAKIDVPVVLATGRGLFGAVPIHEALGLQGGHAVVS NGAVTATMSPLKVQTEITFDPRPIIDHVMDVYPQALIAVEEVGVGYRLNQLFPVGELQGE LHIESIEKLASRPAPRVIIRDPNGYADSFQDLAHSLDLHSVSYVIGWSAWLDITPEGVTK ASALDALCRLKGIDPKDVLAIGDGNNDIEMLQWAGRGVAIGDASEQVQAAADDIAPCFED GGTAVELGRWF >gi|302034483|gb|GL383152.1| GENE 37 30649 - 30798 59 49 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDLQELASELNNFDTETFEVKDYIDYAEMAFGSTCSSSSCTSTCSSTSS >gi|302034483|gb|GL383152.1| GENE 38 30946 - 31854 333 302 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 1 299 1 305 311 132 30 5e-30 MVDHVVDVHDITVTIKGRTILSNLSIQVEEGTFHGIIGPNGAGKTTLFNAIQGFRKPAQG SIELLGHSPYPRNLDLLTQIGIQPQRPAFFPHTTLREHLCAVADIYAVAASRVDDLIEAL GLSHASRTRVEKLSGGERQRLAVATALVHRPAVLFLDEPTAGLDPEARAGLVSLLQSTDL LHMTTLYTTHHLDEAERLCDTVSIIENGRIIVSESPSTLIREADLGATVLLPNALHQADD IAALAGQSNVRVTRDGVSIRTHDTAGLFATLSNHHINTRGAQVHEGHLENVYLQLTGKDH VD >gi|302034483|gb|GL383152.1| GENE 39 31844 - 32578 657 244 aa, chain + ## HITS:1 COG:no KEGG:PPA2207 NR:ns ## KEGG: PPA2207 # Name: not_defined # Def: putative ABC transporter-associated permease # Organism: P.acnes # Pathway: not_defined # 1 244 52 295 295 402 100.0 1e-111 MSTKSRALTRVLLRDDLRDWSTLIFTFIFPSVLLVVLILTIADRVPGMDLTGEISSNVIA FGASFVGIFSGASHLATWRENGMFTVMRTFPLSSRTVLTCQARSGVVMLITQAALLVVVA VSMGMRLKVTALAAVIPLALGYLLFFTLGVLLGILLPTMAGVSMAANVIILGLGFLGGAI MPVTLLPHWAQIVAPWTPIYHLREAATMPLIGVGTWIKAGTGMAYLLGVTALLAIVSERT MRWE >gi|302034483|gb|GL383152.1| GENE 40 32569 - 32772 159 67 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|289427917|ref|ZP_06429621.1| ## NR: gi|289427917|ref|ZP_06429621.1| conserved hypothetical protein [Propionibacterium acnes J165] conserved hypothetical protein [Propionibacterium acnes J165] # 1 67 1 67 67 131 97.0 2e-29 MGMSNVVSMAIPSGFLVCIGTKDERILSSDELRQRWMRTRPDLHSVSYITGLFDEGGTAN ELNRWFA >gi|302034483|gb|GL383152.1| GENE 41 32899 - 33492 273 197 aa, chain + ## HITS:1 COG:STM1664 KEGG:ns NR:ns ## COG: STM1664 COG1396 # Protein_GI_number: 16765008 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Salmonella typhimurium LT2 # 14 190 21 197 200 127 37.0 2e-29 MHCMDTGAEPLAHAIGARVKQQRMTRRWTLDQLASYAGVSRRVLVNVEQGAVNPRVGTLL RLSDALGVGLPALVEPPASRTPKLTRNGQGAALWTGEAGGKGMLVAGTEPPDVVELWDWT LAPGERHDSEAHSDGTRELLHVQEGTVIVEVDGNRYDLAPGDALSFYGDAAHAYINSTDN SARFSLTVFEPDVGTAH >gi|302034483|gb|GL383152.1| GENE 42 33505 - 34245 456 246 aa, chain + ## HITS:1 COG:PA4181 KEGG:ns NR:ns ## COG: PA4181 COG3382 # Protein_GI_number: 15599376 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Pseudomonas aeruginosa # 20 239 15 229 239 163 44.0 3e-40 MPEPMTPETFLDACTVDEAVFELRPDYRALLLVVDGLTPPASGEGNNMVDTLIAQAEAHA RNLLADSPVNELAHIASWREAFRGFGAKPQRTRNCLEALTRRAEKGLPRVNALTDVYNAI SVLHQIPLGGEDLHRYNGPARLIRATGQESFDTTANGEAMIEHPEIGEVIWCDDAGVTCR RWNWRQGRRTGLTDTTRTALFILDALAPVTDEELHATSDALIEALANLGENVQTTTRLIG AQPSGN >gi|302034483|gb|GL383152.1| GENE 43 34656 - 35936 753 426 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5281 NR:ns ## KEGG: HMPREF0675_5281 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 426 1 426 426 456 98.0 1e-126 MRRTRITVAAVTATALIGSLSAITPLPANAASNGNSSITQSAAFSPRATTKISEDCRKAI INDLKLRGAIVGALVKAGLSAADAAALAPRIAAEMAAEGTLTINHHRLKVLVASQLGLVA DAAVQHAAAAIDLSFKAILGASIIPNALGSAAFKNAVIANLVAAGIDKHLARATAVAIVA TALNPALGPIAKFELIKAEIAAQAALLIRRGVHLQKAAIEHVIGRAFDAAVATAIISSPI LSARIVTHLVRAGIDKSIAISLAPHIVKRLAKEPLLAFNTAKLVKDIARQIVDIRNTQEA IAVYKQLKAELPTLDGLVQKACTPEPTPTPTPAPTPTPTPTPTPAPTPTPAPTPAPTPTP APTPTPAPTPTPTPTPTPTPTPTHGATTTTPISRTTDRHNLGSHHTRIAAPALIHAKALP ATGTGA >gi|302034483|gb|GL383152.1| GENE 44 36084 - 37568 990 494 aa, chain - ## HITS:1 COG:PA5099 KEGG:ns NR:ns ## COG: PA5099 COG1457 # Protein_GI_number: 15600292 # Func_class: F Nucleotide transport and metabolism # Function: Purine-cytosine permease and related proteins # Organism: Pseudomonas aeruginosa # 27 484 11 469 480 387 48.0 1e-107 MSAPNSAQDEIRHGNTAPTASGAGRGVEKRTIDMVPDDERHGAPKSQFTLWFGVNMQITA VVNGALAIVFGADVVWAIIGLFIGQVIGGAVMALHSAQGPALGLPQMISSRAQFGVYGAV LPLFLVLLLYFGFAATGTVLAGQAINNAFGVQSRWIGILVFAALTAIIAMFGYDLIHKLG KVSSTIGLLGLLYVAVRLFQVSSFGPQLTDVHFSVVPFLLSIALAAGWQLTYAPYASDYS RYLPRDTKFGSAWFGPFAGSVLGATISMTLGVFIAAAGGQAFIGDQVGFMGNLAQNRVLA ILVFISIVIGKLTINTLNAYGGVMALSTALSGFTGKSSVSPKTRFGFVIGFNVVVVLTAL AASSDFLQVFKSFILTLLMFFLPWSAINLLNYYLICRGCIDIPALYTPRGRYGKLHWPTI VVYLLGVVVQIPFISQAFYVGPVAAAMGGADISWLVGLVVTALVYFPLGRRAFDYPLEIV YPKDVELDPSIVSR >gi|302034483|gb|GL383152.1| GENE 45 37625 - 37927 198 100 aa, chain - ## HITS:1 COG:ECs0047 KEGG:ns NR:ns ## COG: ECs0047 COG2440 # Protein_GI_number: 15829301 # Func_class: C Energy production and conversion # Function: Ferredoxin-like protein # Organism: Escherichia coli O157:H7 # 10 100 6 95 95 78 41.0 3e-15 MTAKSDGFGSVACRLAKNHYDVDEDNSHIHVNQDIARGTGTGKLLVRVCPAHVYSEESDG TISVEYAACLECGTCLAVAAPGSLEWHYPAGAMGISFREG >gi|302034483|gb|GL383152.1| GENE 46 37927 - 39297 162 456 aa, chain - ## HITS:1 COG:ydiS KEGG:ns NR:ns ## COG: ydiS COG0644 # Protein_GI_number: 16129655 # Func_class: C Energy production and conversion # Function: Dehydrogenases (flavoproteins) # Organism: Escherichia coli K12 # 32 425 6 400 429 331 46.0 2e-90 MTGIAELLRGVGSQPSETPPPLWDVPGVEPDFDVIVVGGGVAGAVAAYELAGEGHEVLLV ERGREPGSKNLSGGVLYCRVLEEIFPNFLRDAPVERKIIRNQLMFLNRDSSVAVDYRDAR LVDPVNAVTVLRAKLDPWLSEKCEEAGVTVMSGVRVDSLIERDGQFVGVRAGDDELYSRV VIAADGVNSFLSRDAGLRGPEPKNNLAVGVKSVIGLDPKVIEERFQVKNGEGAAYAVVGD CTKGVGGGGFLYTNIDSVSAGIVLRLDDLERSGESSSQLHDHFLTHPVVAPLLAGGELLE YGCHLVAEGGASMQHDLVAPGLLIVGDAAGFTLNTGFTVRGMDLAAGSALAAAKSVDLAL RNHDVGHGTLDGYISTCNESFVGRDMNTYRNAPAFLESPEMYDDVGQLAADVMYKIYGLD MTPRKHLLPTVASAVRSSNLSFSQIASIGFRAMRAL >gi|302034483|gb|GL383152.1| GENE 47 39294 - 40172 466 292 aa, chain - ## HITS:1 COG:STM1353 KEGG:ns NR:ns ## COG: STM1353 COG2025 # Protein_GI_number: 16764704 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, alpha subunit # Organism: Salmonella typhimurium LT2 # 41 292 48 311 311 154 36.0 3e-37 MSTSWIVTAQPNISHMLELTGQRGDSTVVVAVGVAADRFSGADRVVQIELPAAVPVEAVA GFAAEQVAAEPGDVVLAGTSSADRVLAAAVAVQLDAPIYRGLQELEAGKATVLQLGGVLE QTLSLSTPIVFVCEPGGPSEGPCPELTQVSATVDGATVVSSDKAGSQATNLAAAKRIVAC GRGFREEADLHIAHDLAAQLGAELACSRPLAEGVSWFEKKLYVGISGAQVSPELYIAVGI SGQLQHVVGMNKSQTVVAINSDSDAPIFEQADYGIVGDLYAVLPELTKALAR >gi|302034483|gb|GL383152.1| GENE 48 40205 - 40966 510 253 aa, chain - ## HITS:1 COG:ydiQ KEGG:ns NR:ns ## COG: ydiQ COG2086 # Protein_GI_number: 16129653 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, beta subunit # Organism: Escherichia coli K12 # 1 250 1 252 254 96 30.0 5e-20 MTIAVAYKVAANPQDARVEPDGRIDWSRGKLGISDYDPAAIQVAREAADVSGTELVGVSV GTVAATAAKEKKNVLARGLDRVMTLGDDKTSEWSSVQVAGALAALIQRIGGVTLVVTGDA SVDEGAQLMPALVGARLGLPTFLEVTHVEPSGTGWQITQNYDGGSRVVRTDGAAVIATTP DATTPKAPGMKDILKAAKKPMEDVKCSELDLSRATVNVVSRGPAPVKERKHQVFSGDGAA AQLVAALRDASVI >gi|302034483|gb|GL383152.1| GENE 49 41075 - 42241 371 388 aa, chain - ## HITS:1 COG:SMb21182 KEGG:ns NR:ns ## COG: SMb21182 COG1804 # Protein_GI_number: 16264596 # Func_class: C Energy production and conversion # Function: Predicted acyl-CoA transferases/carnitine dehydratase # Organism: Sinorhizobium meliloti # 6 377 5 384 394 277 40.0 3e-74 MSKGVLEGVKVLDLSRVLAGPYCGAFLADLGADVVKVEAPNGDDARHLGPFKGEESVYFA ELNHGKRSVVLNFKDPKDHERFMKLVEHADVVLENFRPGVTKRLGVDAESVHKTNPRIIY ASISGFGQEGPFRNRPAYDLIVQAMSGIMAATGPEGGKPTRVGESLGDVVSGIFAGWAIC AALYERERTGVGRTVDVSMFNSLLALQVTNLSLLLADGKLPGRIGNRHPVSVPFDTYPAK DGLVALAVANDRIWARLADLMGRPDLGANDAYLGDMNRANKRQELTQLVSGWTQTMTVAE LLRKTEEAGVPAAPIWDLKEALESEHVVARHSLGHFTHPELGKMPYLRFPADFGCGNLEV SSESSPRLGEQTAGAVAAEWGRSANDDK >gi|302034483|gb|GL383152.1| GENE 50 42279 - 43427 556 382 aa, chain - ## HITS:1 COG:MT3374 KEGG:ns NR:ns ## COG: MT3374 COG1960 # Protein_GI_number: 15842864 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Mycobacterium tuberculosis CDC1551 # 2 378 12 388 389 392 54.0 1e-109 MLYHLSEEHEMLRQFVREFAESQLAPNAAEVDDKGVFAQQQYDALVEAGFAAPGIPEQYG GDGADAIASAIIMEEVARVCASSSTVISSNELGTVPLLKYGSEEQRKRYLSEVASGKALF GYALSEADAGSDPAALKCRADEDGDSFVLNGVKAWVTEAGEAKYLVVFAVTDPDDPRHRI SALMVHADDPGISYGAPEHKMGIRGSVTREVVFKNTRIPKERVIGRRGHGLSVALGTLDN SRVSIAAQAVGIAQGALDIATDYVQKRKQFGQPLSNFEGIQFMLADMAMRLEAARALTYS AADRSGRQTDDVSYFGAAAKCFASDTAMAVCTDAVQLLGGIGYSKDSAVERMFRDAKVTQ IYEGTNQIQRIVIARQLFNRSR >gi|302034483|gb|GL383152.1| GENE 51 43653 - 44411 303 252 aa, chain - ## HITS:1 COG:PA3508 KEGG:ns NR:ns ## COG: PA3508 COG1414 # Protein_GI_number: 15598704 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 26 252 35 258 277 92 29.0 7e-19 MEPSRSTITALEVLGALSEHVEPQYASALARRLGIPRTTTYRILAALVSEGYAVHDSELG RYSLGPAAYELAAAYQRQEPLRRVSLPIIDHLVDETHSSIHLALLRGSEVIYLVEQRGIH TPSLITEVGVRLPAEITASGRAMLSCLSWTQVDALYPSSAELSAGHSNSPTSTTELHAML AETRKRGWAREIDSVTVGWSTLAVPVVDVSGYPLASLATTYRTALESSQLDQALLGHLFA AARAIQYRLGAR >gi|302034483|gb|GL383152.1| GENE 52 44531 - 45046 258 171 aa, chain - ## HITS:1 COG:Cgl2030 KEGG:ns NR:ns ## COG: Cgl2030 COG1085 # Protein_GI_number: 19553280 # Func_class: C Energy production and conversion # Function: Galactose-1-phosphate uridylyltransferase # Organism: Corynebacterium glutamicum # 8 165 278 436 442 153 43.0 1e-37 MLPKAVLDPGIFNRWGPDFAVEHGLVLACNDGAVMTVGFGHRYPSVEVWSTSRVDQPWRV DDEGIDAVSDLLHAAHVAVSDDVPANEEWHYRPMGTGVPVPWRIILKLRTSTLAGFEGGT KIYVNTISPTTLAAMLLPKLFEARAAGRIAAMNLGDECEIPRGVLAVTRER >gi|302034483|gb|GL383152.1| GENE 53 45068 - 45856 406 262 aa, chain - ## HITS:1 COG:Cgl2030 KEGG:ns NR:ns ## COG: Cgl2030 COG1085 # Protein_GI_number: 19553280 # Func_class: C Energy production and conversion # Function: Galactose-1-phosphate uridylyltransferase # Organism: Corynebacterium glutamicum # 8 262 13 262 442 257 49.0 2e-68 MNDDPYYRELPDGTIKQVNPFTGTKVWTVPGRGARPLGKQAEQTRELADHDRRAACVFCP DNYLSTPPEKTRLVKRAGGLVRGHDLIRCVPADRLDATVPEFRRVPNLFEILSWRYWQLN WGMSLPRAARDWQEEYLSNPSGEAHVRSGLNAKFKAVGSDRRAEDLGPQELREASAAFFA GGHDVIVARRHYTDEGTTTADIAGSASLSVNEHRAFMALTVDSMAQLHRHNEHVRYVVVF QNWLKPAGASFDHLHKQVVAID >gi|302034483|gb|GL383152.1| GENE 54 45853 - 47127 1076 424 aa, chain - ## HITS:1 COG:Cgl2831 KEGG:ns NR:ns ## COG: Cgl2831 COG0172 # Protein_GI_number: 19554081 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Seryl-tRNA synthetase # Organism: Corynebacterium glutamicum # 1 424 11 429 432 482 58.0 1e-136 MIDPKLLRTDPDAVRRSQAARGEDSSVVDDVVAADEARREAIAAHENLRAEQKGLGKRIA KASGDEKAELLSRTKTISGEVADLKKAADEADAKFTELAKTLGNIVIDGVPAGGEDEGVI KETVGTPRDFAAEGFEPKDHLEIGEALGAIDMERGTKISGSRFYVLTGVGAQLEFALLNL AMSKAAQWGFTPMIPPALVKPSAMEGTGFLGQAADDVYYLPKDDQYLVGTSEVALAAFHS DEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWFDKVEMFVYCLPQEAEAWHEK LLSFEKDFITALQIPFQVLDVASGDLGLSAARKFDCYGWLPTQNRYREITSTSNCTTFQA RRLSIRHRGPDGVEPLATLNGTLCAMTRIIIMLLENHQQADGSVRIPEALRPYLGGREFI EPVK >gi|302034483|gb|GL383152.1| GENE 55 47214 - 48032 1016 272 aa, chain - ## HITS:1 COG:DR1314 KEGG:ns NR:ns ## COG: DR1314 COG3861 # Protein_GI_number: 15806332 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Deinococcus radiodurans # 24 266 93 308 330 68 28.0 2e-11 MTNDKTPTNATIDALYDRSVVDQSGNKIGEIGQVYLDDASGQPAWVTVKTGLFGRNETFV PFKGLETSGDQIRAPYTKDKVKDAPNVDPDGHLSEDETDELYRYYSDTFASDSKAADTNT NQGVAGQKVAGTESAADTKAQTTADQKSPVAGDGSVVRHEERLNVGKERVESGRMRIRKH VVHDTETVEVPVEREEIHVERVPLDEKVAADDAKLSEGTQDIVTHEERPVVNKETVGVEK IKIGKEAVQDTETVSGKVAKEQIDIDNAKHTK >gi|302034483|gb|GL383152.1| GENE 56 48303 - 48500 130 65 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313765175|gb|EFS36539.1| ## NR: gi|313765175|gb|EFS36539.1| hypothetical protein HMPREF9567_00814 [Propionibacterium acnes HL013PA1] hypothetical protein HMPREF9574_02107 [Propionibacterium acnes HL074PA1] hypothetical protein HMPREF9580_00240 [Propionibacterium acnes HL087PA2] hypothetical protein HMPREF9585_00110 [Propionibacterium acnes HL083PA1] hypothetical protein HMPREF9589_00057 [Propionibacterium acnes HL059PA1] hypothetical protein HMPREF9593_00686 [Propionibacterium acnes HL046PA2] hypothetical protein HMPREF9604_01000 [Propionibacterium acnes HL036PA1] hypothetical protein HMPREF9605_00986 [Propionibacterium acnes HL036PA2] hypothetical protein HMPREF9611_00343 [Propionibacterium acnes HL063PA1] hypothetical protein HMPREF9612_00623 [Propionibacterium acnes HL063PA2] hypothetical protein HMPREF9616_00022 [Propionibacterium acnes HL007PA1] hypothetical protein HMPREF9617_00893 [Propionibacterium acnes HL056PA1] hypothetical protein HMPREF9597_00057 [Propionibacterium acnes HL005PA4] hypothetical protein HMPREF9598_00444 [Propionibacterium acnes HL050PA1] hypothetical protein HMPREF9600_00849 [Propionibacterium acnes HL050PA3] hypothetical protein HMPREF9606_00980 [Propionibacterium acnes HL036PA3] hypothetical protein HMPREF9608_00014 [Propionibacterium acnes HL067PA1] hypothetical protein HMPREF9609_00732 [Propionibacterium acnes HL027PA1] hypothetical protein HMPREF9613_01029 [Propionibacterium acnes HL002PA1] hypothetical protein HMPREF9614_01310 [Propionibacterium acnes HL002PA2] hypothetical protein HMPREF9564_00014 [Propionibacterium acnes HL053PA1] hypothetical protein HMPREF9594_00020 [Propionibacterium acnes HL005PA1] hypothetical protein HMPREF9595_02575 [Propionibacterium acnes HL005PA2] hypothetical protein HMPREF9596_01761 [Propionibacterium acnes HL005PA3] hypothetical protein HMPREF9569_01083 [Propionibacterium acnes HL078PA1] hypothetical protein HMPREF9610_00073 [Propionibacterium acnes HL027PA2] hypothetical protein HMPREF9615_00054 [Propionibacterium acnes HL002PA3] hypothetical protein HMPREF9583_00221 [Propionibacterium acnes HL038PA1] hypothetical protein HMPREF9590_01794 [Propionibacterium acnes HL059PA2] hypothetical protein HMPREF9592_00053 [Propionibacterium acnes HL046PA1] hypothetical protein HMPREF9602_01374 [Propionibacterium acnes HL030PA2] prephenate dehydratase [Propionibacterium acnes HL096PA2] prephenate dehydratase [Propionibacterium acnes HL096PA3] hypothetical protein HMPREF9570_00256 [Propionibacterium acnes HL043PA1] hypothetical protein HMPREF9571_00833 [Propionibacterium acnes HL043PA2] hypothetical protein HMPREF9581_00283 [Propionibacterium acnes HL087PA3] hypothetical protein HMPREF9579_00343 [Propionibacterium acnes HL087PA1] hypothetical protein HMPREF9563_00758 [Propionibacterium acnes HL020PA1] prephenate dehydratase [Propionibacterium acnes HL099PA1] # 1 65 15 79 79 122 100.0 9e-27 MSRIAFRPTKDRLGGYCFSIDAIGHVEDERIADALKGLYRSSRMMIFLRFYQKCLHKGFY LARRT >gi|302034483|gb|GL383152.1| GENE 57 48433 - 48687 65 84 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MASIEKQYPPRRSFVGRNAILDILIFRKVKCCKISSKVPGWSLEGTMTTAVRSSPFEPSS DHLLQPERIALWRHDYRQFSVPQL >gi|302034483|gb|GL383152.1| GENE 58 48747 - 49478 347 243 aa, chain - ## HITS:1 COG:CC1885 KEGG:ns NR:ns ## COG: CC1885 COG2360 # Protein_GI_number: 16126128 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Leu/Phe-tRNA-protein transferase # Organism: Caulobacter vibrioides # 30 217 10 194 217 125 43.0 5e-29 MTVPELFGDPDQWPDDDLIAITGVLSPHLVLAALHEGVFPMPITGDEVPRELRGATAWWS PMRRGILLPGQLKVARSLRKTTKHHTTSVDRAFDEVITRCADPTRPYAWIGDRVMEVYRY LHDRGWAHSVETWNAQGRLVGGLYGVSVGGFFSGESMFHDPEYGRDASKTALMRLVCELG PGLLDVQWSTPHLARLGVIDVDRAEYLALLSDALERPSPQWTSLDDPAWNGGHLLERLRK MTN >gi|302034483|gb|GL383152.1| GENE 59 49919 - 50179 119 86 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5294 NR:ns ## KEGG: HMPREF0675_5294 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 86 1 86 86 169 100.0 3e-41 MAKTQCLARIREVRHDIPHVISIDFEPCGMPSITSVDEHVKIVLPSDGSDLRQPVRDDAA LPFLRTYTRRRWFEDGSWGIDVLVWP >gi|302034483|gb|GL383152.1| GENE 60 50442 - 50696 156 84 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5296 NR:ns ## KEGG: HMPREF0675_5296 # Name: not_defined # Def: siderophore-interacting protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 84 41 124 124 162 98.0 5e-39 MTAPRDPDGIVATVQGLDLPQNTHAFVHGEAAMVRPMRRHLRLERGLPRDRIHPSAYWFA GRDADGWRAIKQDFNRSMDAESGD >gi|302034483|gb|GL383152.1| GENE 61 50749 - 51603 826 284 aa, chain - ## HITS:1 COG:AGc1833 KEGG:ns NR:ns ## COG: AGc1833 COG1968 # Protein_GI_number: 15888341 # Func_class: V Defense mechanisms # Function: Uncharacterized bacitracin resistance protein # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 284 3 276 278 189 41.0 4e-48 MNWLHAIILGIVEGITEFLPVSSTGHLRIVEKLLGYDIQGAGITAFTAIIQVGAIIAAIL YFWSDIVRIVVAWCKGLAHKEDRDDPDYTLGWGIILGSIPVGVVGLVFKDAIETTLSSLW VVAIALILWSGVMWLGDRQLGLNRGMKEIGIVDAIVIGCFQALAPLFPGISRSGATISAG LFRKFDRATATRLSFFMGIPALVAAGIYESVSAASDISIAQGGAVAIGWGPTILATVVSL IVAYVSIAWLLKFVSSNKFTGFMWYRVVVGLIIIGLILSNVVTA >gi|302034483|gb|GL383152.1| GENE 62 51815 - 52333 627 172 aa, chain - ## HITS:1 COG:Cgl2474 KEGG:ns NR:ns ## COG: Cgl2474 COG1528 # Protein_GI_number: 19553724 # Func_class: P Inorganic ion transport and metabolism # Function: Ferritin-like protein # Organism: Corynebacterium glutamicum # 1 163 1 162 162 144 49.0 1e-34 MNMSDDILKAFNDQITLELTADMTYRQLAIEADAQDLSGMAAWLRHQADEEIVHANKFID HTLDRGSHPRIGTIEAPEVEVGLSALEIFQAALAHEEKVSEAIRELYRACTSAGDIDAIP LLQWFINEQIEEEATVDEIVGRIELIGDDGPGLLRLDAELGSRNVESTENEG >gi|302034483|gb|GL383152.1| GENE 63 52345 - 52575 125 76 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5299 NR:ns ## KEGG: HMPREF0675_5299 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 13 76 1 64 64 107 100.0 1e-22 MWAIQAQTGDRRMGVEKSHLGSRRIISVTLLYSRRRFSHLFTLALATSPQLGAEGLQGWV IRTRLMISRGHGFLTA >gi|302034483|gb|GL383152.1| GENE 64 52664 - 53302 266 212 aa, chain - ## HITS:1 COG:no KEGG:PPA2226 NR:ns ## KEGG: PPA2226 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 212 1 212 212 421 100.0 1e-116 MTDDVDWQPGIVFTHTLSLTLDDKAQEILQSIRDQLMAVGVPVLHQPAHITVAAVSTMEG VDSHLVDVGWPERITLTKSCRLPNSDGVVGLCPHDPTSSDPVTIFDTSSEGEPELCSAPP SVGSFRALTCLPEDLRRPHELLHRRLAAAGVIAFNYYGPRWWNPHVTMGYQVPPELQGRA VRIVAGVGSLEVGVAGVSVWRVGDGHAYRLWP >gi|302034483|gb|GL383152.1| GENE 65 53168 - 53413 169 81 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5300 NR:ns ## KEGG: HMPREF0675_5300 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 81 5 85 85 158 98.0 6e-38 MQDRYANCHELVPDTLKDLLGLVVEGKGQGVGEHNTGLPVDVVCHNSPPHMCYKAVNTVT FSFKDGPRSNHDAEGGANGGK >gi|302034483|gb|GL383152.1| GENE 66 53625 - 54074 747 149 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|50843662|ref|YP_056889.1| 50S ribosomal protein L9 [Propionibacterium acnes KPA171202] # 1 149 1 149 149 292 100 5e-78 MKLILTAPVAKLGVPGDIVEVKDGYGRNYLLPQNYAIKWTRGAEAQIKDITRARKAKEIK SKEEAEQIRSQLEHLVVQVTVQVGENGRLFGAVTPGDIALAVRKAGGPALEKRSIEITKP IKTIGKHTVGVKLHDAIKGHVTVETVPAA >gi|302034483|gb|GL383152.1| GENE 67 54088 - 54327 384 79 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|50843663|ref|YP_056890.1| 30S ribosomal protein S18 [Propionibacterium acnes KPA171202] # 1 79 1 79 79 152 100 6e-36 MAGPQRKSVNKKKVVPIKTVHIGAVDYKDTALLRKFISERGKIRARRVTGLSVQDQRKVA IAIKNARELALLPYASTAR >gi|302034483|gb|GL383152.1| GENE 68 54454 - 55008 539 184 aa, chain - ## HITS:1 COG:MT0060 KEGG:ns NR:ns ## COG: MT0060 COG0629 # Protein_GI_number: 15839431 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Mycobacterium tuberculosis CDC1551 # 1 184 1 164 164 165 54.0 6e-41 MAGETPITVIGNLTADPELRFTPNGVPVANFTVASTPRTFDRQTNEWRDGEAMFLNCSVW RQFAENVAESLSKGMRVIVSGNLKARSYEDRNGNRRTSYEIDVIEIGPSLKFAAAKVSRN QSSGGGNWGGNSAGGQGGWSGGNGGQGGNWGGNPGNQGSYNNGDANRGGGVDPWASAQTD EPPF >gi|302034483|gb|GL383152.1| GENE 69 55136 - 55426 487 96 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|50843665|ref|YP_056892.1| 30S ribosomal protein S6 [Propionibacterium acnes KPA171202] # 1 96 1 96 96 192 100 7e-48 MRKYEVMIIIDPTVEERQVDSLMEKYLKVITDEKGTVDNVDVWGKRRLAYDIQKKSEGIY VVVNATCEPATIQELDRLLAIDEKIMRTKVMRPEIH >gi|302034483|gb|GL383152.1| GENE 70 55948 - 56331 345 127 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5306 NR:ns ## KEGG: HMPREF0675_5306 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 127 1 127 127 244 100.0 1e-63 MGLRDLLMNHGMAEGGLDLPDVLNALAKGAVLVDVRTAREYEAGHAPGARLVSPKELLAD PFTAVYGDDPLAEPNPHFILVCDTGFRSGHLVAPVREKGYNCDFLASGLHAWRAGGEILI PGPPRGR >gi|302034483|gb|GL383152.1| GENE 71 56509 - 56970 486 153 aa, chain - ## HITS:1 COG:BS_fruA_1 KEGG:ns NR:ns ## COG: BS_fruA_1 COG1762 # Protein_GI_number: 16078504 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Bacillus subtilis # 4 148 3 146 169 102 40.0 2e-22 MATIADLLDERSIDLSLSSGDKDDAIERMVDLVDASGALLDRDVLIKAVRAREEAGTTGL GDGIAIPHGKCDGVDRPALAFARSDEGVRWGAPDGSLASLVFLIAVPEAAAGNEHLRILA SLARSLVKADFRNQLLAASTPQEVREVLAGISA >gi|302034483|gb|GL383152.1| GENE 72 56994 - 58481 1611 495 aa, chain - ## HITS:1 COG:VC1826_3 KEGG:ns NR:ns ## COG: VC1826_3 COG1299 # Protein_GI_number: 15641828 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, fructose-specific IIC component # Organism: Vibrio cholerae # 136 492 10 357 359 304 51.0 3e-82 MKKYVGITACPTGIAHTYMAAEKLEETAKETGNQIKVETQGSIGVENELTADDIREADAV VVAADTEVDLSRFDGKRVLVTGVQDGISRPAELLEQALTAPTRGGAGAAEPSDEPAAETG TTSASKDGKESVGHTLYTALMAGVSHMIPFVVCGGIMIALALGIGGKPTAGGVAVPEDSF WQTILQVGTLAFSLMIPILAGFIAQAIADRPGLVVGMVSGFIANSGAQFPYLTTTGPGGT KTGLNTGFIGAIVIGFIAGYVAKWMRKIPWHEYVKPIVPILIVPIFGTAIVSLLYVYVLG RPLAALFNGLTHFLASMTTSSITVLAIIIGLMVSFDMGGPVNKVAFLFAGGMIAVDQGKV MGLAAAAIPVAPLGMGLATLIDRRLFTKQERDAGIAALFMGLFGITEGAIPFAAADPARV IPSNMVGGAVAAVLAGMFGVHDVVMHGGPIVGVLGACKPLLGFFTAILIGALVTAFMSLA LKRITARKKDRAVTA >gi|302034483|gb|GL383152.1| GENE 73 58863 - 60797 1372 644 aa, chain - ## HITS:1 COG:VC2484 KEGG:ns NR:ns ## COG: VC2484 COG1022 # Protein_GI_number: 15642480 # Func_class: I Lipid transport and metabolism # Function: Long-chain acyl-CoA synthetases (AMP-forming) # Organism: Vibrio cholerae # 30 628 4 595 601 381 35.0 1e-105 MAASTHQPGRAELDPAGELLGKPVPGENFIESHLAHMFRATVANHGFRPATRVRQGGQWI IRTYAETGRRVAGLARAFVTPGLLTEDGLQRGDRISLFAGNCPEWIEADLAGMTIGVIPV PIYPTSTPDQIVHIVTDAGVRVIITAGPKELDRILEARDQMPGLETVILINPADQVGDHD GLTVLSLEQVRQAGVSEEIQTVVEERMGQSCPDDVAALIYTSGTTGEPKGVMISHRAALA ELQALDAFFDVTPADHSLSFLPLSHALEWGWSMAVIRHGCLNTFVPNPKTISAMLAEVRP TLFVSVPKLYEQVMSVAREKVSDSPAKLKIFEWSIRIGREWWQAEQEGRRPSVSLRARHG VADRLVLKAIRDAIGGPKTVLAAGGAPLRKEVEEFFAACGLLVCQGYGLTEASPLVSFNS PGGYKFGTAGRPLVGSQMTTTEDGEILYRGPNVMKGYWKAPEATAAAIEDGWLHTGDIGH IDEDGFLVITDRLKDIIVTLNGKNISPQPIENSLMKDPLFEHAVLLGDNRPCLTLLVKPS LPQVEELAERLHITSMTGPEMLRSEELAEEIRRRVAEITEKLPHQEQIRDLRVLWDEFTT DNGLLTPTLKVRRREVEKRFTEIVEEMYARLAARRRAGKRDSKH >gi|302034483|gb|GL383152.1| GENE 74 60871 - 61668 652 265 aa, chain - ## HITS:1 COG:MT0699 KEGG:ns NR:ns ## COG: MT0699 COG0648 # Protein_GI_number: 15840073 # Func_class: L Replication, recombination and repair # Function: Endonuclease IV # Organism: Mycobacterium tuberculosis CDC1551 # 5 264 2 249 252 235 52.0 7e-62 MTKWIIGGHVDTADAVAQAAARGADIAQISLGDPKSWKKPVCDFPGGSLALREAAGEAGL TLVVHSAFVINVASLNNRIRIPSRKLLQQTLDAAAEVGAMGVVVHGGHVRAGEPIEKGQD NWRKAIDGLEMSVPLFVENTAGGDNAMARFLERLSGTWEAIGAASGHENVGFCLDTCHAF AAGLDMASLVDDVRGITGRINLVHANDSQGAVGSGRDRHANLGEGQCEADTLVDVIRAAE APVVVETPGEAEGQARDIAWLRERL >gi|302034483|gb|GL383152.1| GENE 75 61780 - 62589 197 269 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163797523|ref|ZP_02191474.1| 50S ribosomal protein L9 [alpha proteobacterium BAL199] # 3 228 6 229 259 80 29 3e-14 MATSMVTGGTSGIGREFVTQLAARGDDIVIVARDTERMAAIKADVEARYGVSVETIAADL SRREDVDQITTRVEDPNHPVDLLVNNAGFAVHAKILDPEALELHDRAVEVMMRAVLVLSA AAGRAMKARGHGAILNLSSSSAWINTGNYSAIKAWVLTFTEGLSNELAGTGVKAMALCPG WVHTEFHSRANVTANHLPDFFWIDAEVLVREALNDLDHDKVVSIPTPLWKFFIAVATHTP RSAMRFLSRTLSSSRDKDDHPRHTPGGEA >gi|302034483|gb|GL383152.1| GENE 76 62591 - 63442 461 283 aa, chain + ## HITS:1 COG:TM1693 KEGG:ns NR:ns ## COG: TM1693 COG0204 # Protein_GI_number: 15644441 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Thermotoga maritima # 31 229 55 241 247 80 29.0 4e-15 MASVKPTKDRGRYTNDLSAATRQAANMLLLRPLVWKVVKVSVHGADNLDGLDGAYVAVAN HSSHLDAPLVFGALPKRLSKYLATGAAADYFFTAWWKAIAPVLFFNAFPVDRGKGKSKQG ARSPRSHRGMAGSLLTDGVPLLIFPEGTRSRTGAMGTFKPGAAALAISRGVPVIPIALVG AWAAMPSEQAGLPKGRPSVHVAIGHPMDPVPGEIAHQFSERIRRQVIELHDQTARAYGMP TLDEYGRHRALSQASESGDTASTNHSTCTSKEPAEPPRPNGGQ >gi|302034483|gb|GL383152.1| GENE 77 63442 - 63924 475 160 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5314 NR:ns ## KEGG: HMPREF0675_5314 # Name: not_defined # Def: bacterial transcription activator, effector binding domain protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 160 1 160 160 305 100.0 4e-82 MDRPVNIREVEACRVISMTRVVSIDELGPFMDEAFGILERLAPGDPTLGKASPFVIYHDG LTAEHDGTVEVCQPIRGTIDDAVLPLDVAVRTVEAHREAWVTVTKAELEYPDIDEIYDAF DAWLEEAGLVRSAAPREAYWADWDTTGMEEPVCDVCFPIE >gi|302034483|gb|GL383152.1| GENE 78 63995 - 65188 1004 397 aa, chain - ## HITS:1 COG:BS_yabE_1 KEGG:ns NR:ns ## COG: BS_yabE_1 COG3583 # Protein_GI_number: 16077108 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus subtilis # 1 300 39 339 341 101 28.0 2e-21 MSKVVASAIAGALSLTSAGGLTMVQALDRDTVTFSVDGVSQQAKVKPGTVKQALAQQGIT VGPHDDVQPSLDSEIHGGQVITVNYGRRVVVTIDGKKVVRWTTAKNVAEVLAQLNQSDPD NLVSVSRSLDISRAGLSFSMQTAKDVTVTIGGKTQKITAVGTVADALKAAKVEVDSSDAV NPGLGTPLSDGMKITLTMVDQKSQKRRVAVPFSTKKVEDSSLPKGEIKVITKGVNGINEE TWTVVFKDGKKVSEKKVSSKVVNAPVTQVVKVGTKTASSSSPSTRSSSASHRSTASQSSD PVTSGTTCLASTYGEGDGTAGGPTASGETFDPSAFTAASKTLPLGSTIRVTNVSNGRTVT VRINDRGPYVGGRCLDLSTAAMNAIAPGQGLVTVRYS >gi|302034483|gb|GL383152.1| GENE 79 65468 - 67726 1638 752 aa, chain - ## HITS:1 COG:Cgl0382 KEGG:ns NR:ns ## COG: Cgl0382 COG2217 # Protein_GI_number: 19551632 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Corynebacterium glutamicum # 22 741 17 747 755 595 49.0 1e-169 MSTPTHPDAQSELKDATEPTSINLDITGMSCASCAARIAKKLNKVDGAQATVNYATSKAH VLTTKPIEVDDLIGVVEAAGYGASVPTPAAPPEDHAAKIRARLIVAIILAVPVMLLSMIP ALQFDGWQWLALALSLPVVFWCGEGFHRAAWTNLRHGATSMDTLISLGSLVSLGWSVWAL MWGSAGHVGMRHRMTWALERTDPSSALYLEASVGVITFILIGRWIEARNRAEAGSALQAL LRMGAKSVRMIRDGQEVTVPIEALTVGDHFVVRPGEKVATDGRVAEGSSAIDASLVTGES LPVEVAVGDEVIGATVNTSGRLVVEATAVGSDTELSRIATLVEAAQTSRSKTQDLADKVS SIFVPTVLIISALTMIVWAVLGQGVTAAFTAGVAVLIIACPCALGLATPMALLAGTGRGA RLGIVIKGAGSLERARGIDVMAMDKTGTLTTGRMAVVAVWDESGRVVNISDNPPALAVTA ALEVGSEHPISRAIVEACPGVAPAEDFRALPGLGVSGTVNGLPAKAGRVSLFDAIPDTLS KNVERAQAEGRTVLVVGRGDDILGAIAVSDEIKPEAVVAVKRMVQAGVRPVLVTGDNSGA AAHVASELGIDEVMSEVMPADKVDVVTRLRSDGSRVAMMGDGVNDAAALQTADLSIAMGT GADVAIAASDIICTRGDPRLAVDALSLAHATDRTIRQNLFWAFAYNVIAIPVAAVGLLSP VIAAAAMAFSSIFVVTNSMRLVRWHPGMSDSN >gi|302034483|gb|GL383152.1| GENE 80 67762 - 68100 154 112 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSGVTGSLTGSPSDPGGRWVVGKVNVGGRGLTASCGPNPGPDVKISTETNGSGLVTAAAA AAFTSVLGMLSSSLLGVLVSAAAATRSFSFLPGVAMTSTAALTTGVTGSIKR >gi|302034483|gb|GL383152.1| GENE 81 67915 - 68307 362 130 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5317 NR:ns ## KEGG: HMPREF0675_5317 # Name: not_defined # Def: heavy metal-associated domain protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 130 1 130 130 144 100.0 8e-34 MHKTYTINGMTCEHCVKAITEEVSALDGVDNVTVSLESGSMTIDSAEEIPFGKVADAVDE AGEYTVAEASSLDTAGHPGGQCGCGGHGHAGKKAEGSGCGCGGHQHSEEAAAKHAEHASK GGCGCGGHQA >gi|302034483|gb|GL383152.1| GENE 82 68331 - 68729 325 132 aa, chain - ## HITS:1 COG:ML2609 KEGG:ns NR:ns ## COG: ML2609 COG1937 # Protein_GI_number: 15828408 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mycobacterium leprae # 40 132 43 135 135 120 62.0 9e-28 MTNSGDGCCAPGGDHVAGDHDVESSAPGETCGACGCNHPQHGYLGHKDMHLRRLKRIEGQ VRGLERMVDEEKYCIDILTQVSAVTSALKSVSLELLAEHMSHCVARAAQAGGQEAEDKIA EANQAIARLVKA >gi|302034483|gb|GL383152.1| GENE 83 68670 - 69017 173 115 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313803247|gb|EFS44443.1| ## NR: gi|313803247|gb|EFS44443.1| hypothetical protein HMPREF9576_00372 [Propionibacterium acnes HL110PA2] hypothetical protein HMPREF9615_00025 [Propionibacterium acnes HL002PA3] hypothetical protein HMPREF9343_00104 [Propionibacterium acnes HL099PA1] # 75 115 1 41 41 65 97.0 1e-09 MIPRDMVTARGTTAVTRVGHASSSAPESTPRGYLRQGRNLPVTSRHTRRACRWFDGPSNP LRRPPSISTAPVDNVSLDGTHVAFKPYLYTSQPNTVSPATRRKFSSNNSHSDYNP >gi|302034483|gb|GL383152.1| GENE 84 69201 - 70547 1305 448 aa, chain + ## HITS:1 COG:Cgl2923 KEGG:ns NR:ns ## COG: Cgl2923 COG0305 # Protein_GI_number: 19554173 # Func_class: L Replication, recombination and repair # Function: Replicative DNA helicase # Organism: Corynebacterium glutamicum # 14 448 74 509 510 486 59.0 1e-137 MSSAPAEPGPSLDRNPPQDIDAEKSVLGAMLSSKDAIADVVEEIKGVDFYRPGHELIFNT ITDLYGRGDPADTVTTADELDRRGELERAGGRLYLAELLTNVTVTANAAYYAKIVAEKAV LRRLVEASIRIAQMGYQGQGEVADIVDAAQQTLYDVSTRKTSEEYHPLSELFESTFDELE AIEARGDAMAGIPTGFTDLDELTNGFMPGQMIIVAARPAMGKSTLALDFARAAAIKNHLA AAIFSLEMGRNEIVMRLLSAEAGIELSRMRAGRLSEEDWQRMVDKTTQISSAPLFIDDSP NLTMMEIRAKARRMKQKFDLKLVIIDYMQLMTSGKKVESRQLEVSEFSRQIKLLAKELEI PVVALSQLNRGPEQRTDKKPMMSDLRESGSLEQDADVVILLHREDVYDKESPRAGEADII VAKHRNGPTRTVPVVFQGHYSRFVDMQR >gi|302034483|gb|GL383152.1| GENE 85 70589 - 71599 570 336 aa, chain + ## HITS:1 COG:Cgl2948 KEGG:ns NR:ns ## COG: Cgl2948 COG0604 # Protein_GI_number: 19554198 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Corynebacterium glutamicum # 3 334 11 335 337 264 43.0 2e-70 MESMHAVAITGPLPVSDPECFVDVDLPIPEPGPHDLLVEVQAVSVNPIDIKLRKEAGTLS HPRVLGFDAASVVRAAGSEVNGFSVGDEVWHSGNRDRPGTYSQFTLVDSRIVSKRPPSLS IAEAASLPLTALTSWEALIDHIRLGTPEERSNKAFLMIGGAGGVGSAAIQLARAITSGPV VATSSRPESAQWCQDMGATGIINHREPLAPQVNDFGITGFDGILSAYTPPASTLAEIIAP FGHLVMIDGTDSFDLMAFKSKSLTVTSESMFSRPQFATPDVAEQGRALASIADLVEKRQI RPTMTRHIEGLTAQHVREATAAVESGAMIGKVVITL >gi|302034483|gb|GL383152.1| GENE 86 71746 - 72063 206 105 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5321 NR:ns ## KEGG: HMPREF0675_5321 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 105 1 105 105 153 100.0 3e-36 MKLNRAENVNTAEVAGLGLVGGWLTARTTGVRPLGGTVLAAAGCWAGRTWLAKSGPTIAG LLGATYLAAFGASHGLAKKIGAWPAVITVTAATCTACHFLCDTKA >gi|302034483|gb|GL383152.1| GENE 87 72060 - 72635 252 191 aa, chain + ## HITS:1 COG:AGl2973 KEGG:ns NR:ns ## COG: AGl2973 COG2094 # Protein_GI_number: 15891599 # Func_class: L Replication, recombination and repair # Function: 3-methyladenine DNA glycosylase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 8 187 26 193 201 120 42.0 2e-27 MIDLSAPAIEVAPLLLGATIWRGPVGIRLTEVEAYMGLDDPASHAFRGPTPRARVMFGPP SHIYVYLSYGMHRCVNLVCSPDGEASAVLLRGGQVIAGHDDARRRRGNVAENRLACGPGN MGSALGASLEESGNPVSIIGNGAISALGWRLEPAPEIAEFRQGPRVGISRNIDAPWRWWI PQDPTVSGPRT >gi|302034483|gb|GL383152.1| GENE 88 72959 - 74209 1292 416 aa, chain - ## HITS:1 COG:YPO3824 KEGG:ns NR:ns ## COG: YPO3824 COG0247 # Protein_GI_number: 16123959 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Yersinia pestis # 17 409 12 415 415 240 33.0 4e-63 MGVIEETFAGHEVSRQSLDACVKCTICETMCPVAKATPLYTGPKYNGPQGERYRDGASVD HSLEWCNFCGICTLHCPQGVKIAELNEQAAAKMKHQNGVPLRDRLIPLTTLEGRVLSPIA PLANWGLNQKPIRIAVEKIIKVHRDAPMPTAQTETLSKWMRHHKPAKPATKGPIVFFQGC AGGYFETETSKKSIEVLEHLGYEVLVPKQGCCGLAKQSNGLFEGATKDILSLCDKIISLG KGLTVVSSSGSCVGMMKHEAHEIMGVDDPRLHDVSVRSRDFSEFLMDEYRNGELDTSQFR SIDITVPYHQPCQVKSQGMGFPAVQLMELIPGVKVLESNEPCCGIAGTYGLKAERYEVAQ RIGAGVFKHMQDHNEGVGVCDTETCRWQISKSSGVKIVHPVWLLHHSLGLSNNLLD >gi|302034483|gb|GL383152.1| GENE 89 74212 - 75555 1227 447 aa, chain - ## HITS:1 COG:VCA0748 KEGG:ns NR:ns ## COG: VCA0748 COG3075 # Protein_GI_number: 15601503 # Func_class: E Amino acid transport and metabolism # Function: Anaerobic glycerol-3-phosphate dehydrogenase # Organism: Vibrio cholerae # 21 436 6 425 436 129 24.0 1e-29 MSTATVPTKSVTADRFGAQHVVVIGSGLAGLTTALRLRRGGARVTLVTKGVGGLQLGQGT IDILGYTPDRVEKPYQAVQEFASQHPAHPYAKIGVEAVKEGIDFLREVVGDSYLLGDGEA TINVPTAVGAIRPTALVPPSMINGNLKDGDKVVVIGLAQYKDFHAGLIAQNINRTTLPGG GHASARAVVVDFEPREGEYDATGLAIARSLDDARTRRMLAEGLRGFVNPGEIVALPAVLG IDNHSEVLADFKKILGAEVFEIASLPPCVPGMRLNNKLVATAKNERVDYVLGSKVTGCTV ADGKVVSVTVGTAGAGKEIKADAVVLAGGGFESGALKLDSHGHLHETILDLPVTMPEGVK EEDLIHGDYWGSPQPLFLCGVEVDETMLVTYQGKPVHSNVYAAGGVIAGATRWQEKSGEG IALGSAIKAADAILSSVGAGAATKERN >gi|302034483|gb|GL383152.1| GENE 90 75552 - 77186 1470 544 aa, chain - ## HITS:1 COG:YPO3826 KEGG:ns NR:ns ## COG: YPO3826 COG0578 # Protein_GI_number: 16123961 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Yersinia pestis # 22 536 26 539 551 355 37.0 9e-98 MRTMDADVVVIGGGATGAGVVRDVAMRGYRAVLLDKADLGQGTTGRYHGLLHSGGRYVVS DPGSATECAEENEIVTRIHADAVEKTGGLFVVTPEDDLEFSDQWVEGAKKSKVPFEEIST AQALRREPRLNPGIKRAFAVQDGSVDGWQMVWGAAHSAIEYGAKVMTYTAVTEIIREGDQ ITAVVAHDLKHDEQIRIDCKFVINTAGPWAGRIAELVGCYDVDVVPGRGIMIAMNHRLVN TVVNRCIYPADGDILVPVHTVSIIGTTDVKADDPERLAIPRNEVQQMLDSGEALVPGFRD ARAVHAWAGARPLFKDKRVSATDPRHMSRGMSVLDHGSRDGVNGIVSIIGGKLTTYRLMA KNVVDVMCEQLGDDRPCRTADEAVPGSTVGKNYLITHRLGENEERRAGTGLVRGGDPKTV PSSKKIDNQVICECELMSRKMFTDLLAEQPDATFDDLRRQLRLGMGPCQGGFCSMRATGI AVEEGTIDAERATGLLRLFLKNRWIGLWPILYGEQVRQTALDDWIFQGTFDVEHLPTPQQ EVEL >gi|302034483|gb|GL383152.1| GENE 91 77603 - 78568 1013 321 aa, chain - ## HITS:1 COG:SMa2137 KEGG:ns NR:ns ## COG: SMa2137 COG1052 # Protein_GI_number: 16263617 # Func_class: C Energy production and conversion; H Coenzyme transport and metabolism; R General function prediction only # Function: Lactate dehydrogenase and related dehydrogenases # Organism: Sinorhizobium meliloti # 28 314 37 317 324 233 47.0 3e-61 MARIIVTAPQLMSVVNEELPGHEVVGGDHFMDRQELSRQIATADAILTSLSDPLDAEMIG QGKNLKVIGQCAAGFNNIDLDAAKQAGVVVTSTPGVLHEATADLAFTLLLEVTRRTGEAE RWVRAGRAWRYDHTFMLGAGLQGATLGIVGLGQIGEAMARRGAAFGMNVIYNARHEKDVA AIDAVNLNTQPTRRVELDELFATSDVVSLHCPLTDETRHLVDADALAAMKKTAYLVNTAR GACVDEAALVEALKTGAIAGAGLDVFEEEPTITADLLTMENVVLLPHLGSAALPPREAMS RLAARNIAKVLDGKPAETPVE >gi|302034483|gb|GL383152.1| GENE 92 78275 - 79150 373 291 aa, chain + ## HITS:1 COG:MT1448 KEGG:ns NR:ns ## COG: MT1448 COG1846 # Protein_GI_number: 15840862 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Mycobacterium tuberculosis CDC1551 # 145 272 37 165 175 85 38.0 1e-16 MEDAWGRCDDNPSLLSGVKVDVIKTSGALTDDLQVLALTNHLGVEGIGQARQYGISGSDL ARQFLAVHEVVATYDLVTGELLVNDGHELRCGDNNAGHSITVGDRATDTQHVAKTNAVCN NSAVQISRDATNGLTPDHTDVEIALQASWALIDVAARSLAELAEDVSAPQYRLLVLIDAG VTRGVDLARDLEVHSSTIARMVERLVAKGFIDRSPDPDDRRANVLSLTKRGATLVQNVNE HRRRQLVDLLSHLEPGEIDTVVTGFTLFTRAAEASGHGTPNRPCAEDSNQQ >gi|302034483|gb|GL383152.1| GENE 93 79147 - 80874 1191 575 aa, chain + ## HITS:1 COG:MT0151 KEGG:ns NR:ns ## COG: MT0151 COG0038 # Protein_GI_number: 15839524 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Mycobacterium tuberculosis CDC1551 # 37 465 44 476 492 314 49.0 3e-85 MTETAIHPEARAAWAKQLRRLRRALVPHRPKAFRDSLNRWLLMGTVIGIVSGVGAIIFFF CLKTGTHWLLETLGGYTPPGTLGEGGGVAGTRLTRPWAIPLIVAGGALVSGTLVYFVAPT AKGHGTDNAIHAVHHDPTALKGKVAAVKIIASSLVIGSGGSGGREGPTAQISATVISSLC KKLKIATPDARIAVSAATASGIGAIFRAPLGGALLGAELLYRDDMESDAIMPSLVSSIVA FVVFGSVYGFEPIFGSLSGVQFSQPLQLIWFVLLGLTAGLMGKLYVEVFYSGTTLFDRLD KVPGWLVPAIGGLGVGLLGLLIPAALGTGYGSVQQEMFANNLVRMPLLMVLAIPFAKILS TTLSIGSGGSGGVFGPGMVIGGATGAALWRLLEGLPGIPSSPMSFVIVGMIACFGAVAHA PLGVLLMVGEMTGNLSMLAPGMIAVAVAGRVVGDTSIYTSQLKDRLEGRRVHAMGRVTKL SEPKSDDEVASPKPAIKKPSGKNASLSKPAAEPLAKPQAKPATVPSPHPTTAPTPATHQR DTPRIVPEIIRAKDRKHELLARSPKPPNDPGPSSA >gi|302034483|gb|GL383152.1| GENE 94 80877 - 82283 1022 468 aa, chain - ## HITS:1 COG:BS_gabP KEGG:ns NR:ns ## COG: BS_gabP COG1113 # Protein_GI_number: 16077698 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Bacillus subtilis # 19 449 9 441 469 314 42.0 3e-85 MAVAATGIPAESGEPAMDKPRMKGRHLVMMSLGSAIGTGLFVGSGKGVAAAGPATLVAYI VAGLLVIAIMYMLGEMVAAHPDSGAFSVYTSRAMGSAAGFAMGWVWWIELVVVVAAEAIA AASTLVAMWPIAPVWLLTLIFLVVLTAINLLGADRFGEFEFWFALLKVVAVVVFLTIGVL LICGVLAAPAAGTSNLVGHGGFLPNGWSGVATALLLVAFSFGGIEIMAVAAAETEDPAHN VSRAVRTIVWRILVFYMGSVAIMVIAVPWDDPELGASPFVAVLNRAGIPAASEVMTLVIV LALLSSLNANLYGAARMLGSLAERGMAPRVAMRTRGRSVPTVAVLASVAFGFCCVLATFE WGDAVLGTLLNIVGSTIIVTYFFTICSHYVLRRRAEKEGAPLPMRLKGFPVVNWAVMILL IGIVVLGMFSPDVRAQLMSTGALVVILYVIGVGWSHHAGRSPFHPTTD >gi|302034483|gb|GL383152.1| GENE 95 82399 - 82890 252 163 aa, chain - ## HITS:1 COG:Cgl1145 KEGG:ns NR:ns ## COG: Cgl1145 COG1846 # Protein_GI_number: 19552395 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Corynebacterium glutamicum # 8 150 6 148 162 101 34.0 6e-22 MTEDSAVWLDDHQQRVWRLWLEVSTTLPAVLNRQLSRDSQLSVQDFEVLVRLSETDGGDM RVVALAEHMGWERSRLSHHLTRMEKRGLIERRVCCSDGRGAIIHLTDQGTAALQQAVPGH AALIRRVVFGGLDCGHLNDLEAILSRICQSLAEEGKVNPTDHS >gi|302034483|gb|GL383152.1| GENE 96 83263 - 84408 547 381 aa, chain + ## HITS:1 COG:Cgl1140 KEGG:ns NR:ns ## COG: Cgl1140 COG0420 # Protein_GI_number: 19552390 # Func_class: L Replication, recombination and repair # Function: DNA repair exonuclease # Organism: Corynebacterium glutamicum # 1 362 1 361 365 202 36.0 7e-52 MTRHYLSKRGDDDPQARFTADRIETVRRLGDVARQEGCEFVVVAGDVFETHNVSTQIIAR ACEAIASIDLPVYLLPGNHDSLEPGCLWDGPEFAQRCPSNVQVLRDHAETQIADGNGVVI ATIVASPLTTRHPSTDPLADLVKNLEPAQTPRILVGHGQLEGLSGDAREALISRAPLEDA IARGALSYVALGDRHIAWPTNDNHAAIRYSGTQETTSFNEESVGTAVIVDLGDPLTCQTI NVGTWLHARVSQEVASEADLQALRDRFDSFNRRDRTIIRYDLHGQVTISQKAKLDEIIAD YETVFASLEPSETRHDLTVVGDDISLTEADVPGWVRDAAEELSDMCATNEDAVAALTLLH HLVSAEGASIASTAHTAEVSR >gi|302034483|gb|GL383152.1| GENE 97 84405 - 87011 1699 868 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5333 NR:ns ## KEGG: HMPREF0675_5333 # Name: not_defined # Def: RecF/RecN/SMC N-terminal domain protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 868 1 868 868 1333 100.0 0 MKLHRIHVENFKAIDERTLELPDCGVVIATGRNEIGKTSMVEALDLLLDTSTKASSKSRK VRIAQPYGTSLQVVVEAEMTIGDHRFVHRKCFLKDKESSLKFLAGPRAGQTITGDEAVEM METLLSGTDMTLWNALRLMQASGLSPLRLDSSQALTAALEQAGGQQPDEGSGGGLMDRAR AEYDKYFTPGGSERRNVFADRDELEEIRSNLAKGQERLAEVDEVVDSLSRINEQISHDQT VVASKKTDCQKAEAALASLTELEKEVETTKRTAKEAAQRHAEAKRAHDMRAKLIDDLATA QDKYEHCQRVAAELSELGRSVAEEREEAKTAFDEAQRKVTQAEEAETQARQTLTTARVGE ESTKARQQLDRINELKTRITAEQQRLDTEKVTGKALSALREAVKADDLARDKALMASPQL AIEHLADGVSLRIDGADLDVPIGTTNQRRVHGELVMEMGEAWRVRISPTSEVMTLGNDAE KAHQTVVSQLEDLGVASLEQAESRLAERRVMETHISSWREHLEEEQGEVTIQELEAMAER TTETVSITAAEAQKLEEEAVAAANEARTAQRQADNRLRTVEERHVEAHEKVFRANIDAEK TAETVTRLSTELTAARKITSDEALTETLTTAQEQARLTQAEADRAQAALAERNPEQVHTE AEGTRVALTTARDRLENNIRRRAELNGQLQGLGRQQRQTEVDSLTIKEHQLARRVTGLEQ RARSAKLLYQTLAAHLEHVRQSYVAPFTTQIDRIGRGVFGQELHVEIDSTLSVVARQLNG SRLEWDQLSSGAREQLGLIVRLAAARLIDPDDGVPVILDDALVYSDPVRVRHVLAEVAQS AQTSQIVVFTSAPERYDSVPGAQRVDFE >gi|302034483|gb|GL383152.1| GENE 98 87071 - 88417 810 448 aa, chain - ## HITS:1 COG:Cgl1936 KEGG:ns NR:ns ## COG: Cgl1936 COG0534 # Protein_GI_number: 19553186 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Corynebacterium glutamicum # 17 445 16 435 435 199 34.0 9e-51 MVRGSRDPGSEVGAGYRQILNLAVPAFLSLIAEPLFLVADSAVVGHLGTAELAGLGVASA ALTTFTGLFVFLAYATTATSSRRMGAGDRQGAAQAGVDGLWLSVIIGLLVAIMLVAIPTT VAGWFGASGAVAEQAGRYLRITGFGVPAMLATMAITGVLRGFQDTRTPLVVTVVTFSANL VLNLWFVLGMGWGIQGSAIGTLVCQIAMAVALVWVLRIRTRGLDLSLVPHLSGIASSLRD GIPLLIRTLALRAALYVTTWVAARSGAITMASYQVTMTMWNLLLMAMDALGIAGQALTGA SLGAGDVRRTRSLTATMTRWGLVAGVVIGIVLAAFHQVVPALYTDDPAVHRAVAAGLLVV AAQQIVAGPAFVLDGVLIGAGDGRWLSGAQVVMLLVYLPMAWAVHLLAPSDPAAAVVWLW VAFSGFMIVRCAILAWRARGDAWMRTGA >gi|302034483|gb|GL383152.1| GENE 99 88417 - 88977 384 186 aa, chain - ## HITS:1 COG:RSp0599 KEGG:ns NR:ns ## COG: RSp0599 COG1309 # Protein_GI_number: 17548820 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Ralstonia solanacearum # 1 179 30 214 214 79 37.0 3e-15 MARSGGTEAVVLREATRRAGVSPNAAYRHFANREALLDEVGLAAADQIGVVMREAVAEAQ PIDDESVAVSQLVAACRAYLDFALTEPGLFDVAYRISDTGLDALNVDRSKAPNLPDSVIQ DVLSDREVTLSDRVDVRSLVILLWSVLHGFASLSTSGPLRGEKTPEWADRVLDVIRASLR GAIARA >gi|302034483|gb|GL383152.1| GENE 100 89201 - 90073 617 290 aa, chain + ## HITS:1 COG:Rv0812 KEGG:ns NR:ns ## COG: Rv0812 COG0115 # Protein_GI_number: 15607952 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase # Organism: Mycobacterium tuberculosis H37Rv # 8 274 1 270 289 160 36.0 4e-39 MNSSVPYLLAILGKGVVSPSTMVCHADDLGLVRGDGVFDTTRIVTAQDGTSRIDHLDEHL SRFARSIAGVNGPTPDLDSWNHLIEEAARTWRIPGEAALKLVYTNGRQVVPGPPRGFLII SPLSETAIEEREGIDVLCLSRGVTSDAFADAPWLLGGVKTLSYAVNVAALRYARSQGADD AIFTSTDGYLLEGPTSGLVIAADDGLWTTPTGPTGILNSITVSTVFEAAGEDGVQTSTRL MKHGEVLRAQGAWLLSSVRGVAPILSIDGHPVPQDEDMTHRLRTWAGFEN >gi|302034483|gb|GL383152.1| GENE 101 90073 - 90561 358 162 aa, chain + ## HITS:1 COG:HI1434 KEGG:ns NR:ns ## COG: HI1434 COG2606 # Protein_GI_number: 16273339 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Haemophilus influenzae # 8 155 2 150 158 148 53.0 4e-36 MPASDSASAATKALAKAKIPHVLHSYDHDPSNHHFGDEGAAKLGFDPSIMLKTLVVELVP SGKLAVAVVPVSRQLDLKAFASAVGAKKVAMADPAAAERATGYIVGGISPLGQKKRLPIC IDESVLGQPRVLVSGGRRGLSVELSPSDLVTVTGAVTAKISC >gi|302034483|gb|GL383152.1| GENE 102 90574 - 90972 402 132 aa, chain - ## HITS:1 COG:no KEGG:PPA2263 NR:ns ## KEGG: PPA2263 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 132 1 132 132 162 99.0 5e-39 MTQQHTSTIPSAPKALTISAWVAVGAVIVQAVLACFMLSGVHGLGDVHMGFGIVTLLAAI VAAVLAVMWKRRGGSSAVVGHAVGMAVLILVQYVLGELSSGGAIKWIHVVLGVVIVIGLL VLPQSIGKNSSK >gi|302034483|gb|GL383152.1| GENE 103 91002 - 91538 228 178 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5339 NR:ns ## KEGG: HMPREF0675_5339 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 178 1 178 178 286 100.0 3e-76 MSRRRSEENIIDVRARLGHNVDQRNSDILGATTESARVGRSAGVFTTAMAITGLVWGLTL AIWATSPGADGTRAGMPVQGWFGCLLIGLLYAMGVTVILIIPVVLMAALLGGRLVRRRSQ RIAGGVVGAVTVLVGAAGLYALILDLSAVVEVSWPAVVTASALGCWWGPWVMVGRSSR >gi|302034483|gb|GL383152.1| GENE 104 91535 - 92329 565 264 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5340 NR:ns ## KEGG: HMPREF0675_5340 # Name: not_defined # Def: ErfK/YbiS/YcfS/YnhG # Organism: P.acnes_SK137 # Pathway: not_defined # 1 264 1 264 264 454 99.0 1e-126 MHAPGRTSNPEPRVGSGPWRGGGFLVALVTMVCLVAGCGSSMPAASEPCIDFVPGAGDMR SRQQYPVTCPTASPKSAAKAAHKQPDPDGPSSNEGVNDPEDSTGPKADDSAPVTPTPTPP AASLTVGAKSSAGPGSYVLWIKAENRVYLVAHGLVKRVMLTTAEPWKTPVGNYKIQYKMR HAAFTEDGIRWYIPNFLSFYQRPGATGTIGFHQIPWDEKTKKPAQPVYTLGLPGYSSHGC ARLAPKDSEALYRFAHEGTKVKVR >gi|302034483|gb|GL383152.1| GENE 105 92245 - 92463 122 72 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVLSSLSAPTRLSRGMSRRALRGVSQFCYRRCIRTVTVGPLNLTRCMPPDVPRTRNRASA QARGVAAVFLLP >gi|302034483|gb|GL383152.1| GENE 106 92462 - 92686 171 74 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313765124|gb|EFS36488.1| ## NR: gi|313765124|gb|EFS36488.1| hypothetical protein HMPREF9567_00763 [Propionibacterium acnes HL013PA1] hypothetical protein HMPREF9574_02160 [Propionibacterium acnes HL074PA1] hypothetical protein HMPREF9585_00161 [Propionibacterium acnes HL083PA1] hypothetical protein HMPREF9593_00736 [Propionibacterium acnes HL046PA2] hypothetical protein HMPREF9612_00571 [Propionibacterium acnes HL063PA2] hypothetical protein HMPREF9616_00075 [Propionibacterium acnes HL007PA1] hypothetical protein HMPREF9609_00679 [Propionibacterium acnes HL027PA1] hypothetical protein HMPREF9614_01261 [Propionibacterium acnes HL002PA2] hypothetical protein HMPREF9618_00965 [Propionibacterium acnes HL082PA1] hypothetical protein HMPREF9564_00065 [Propionibacterium acnes HL053PA1] hypothetical protein HMPREF9594_00072 [Propionibacterium acnes HL005PA1] hypothetical protein HMPREF9595_02523 [Propionibacterium acnes HL005PA2] hypothetical protein HMPREF9583_00170 [Propionibacterium acnes HL038PA1] hypothetical protein HMPREF9602_01425 [Propionibacterium acnes HL030PA2] ABC-type Fe3+-hydroxamate transport system,substrate-binding protein [Propionibacterium acnes HL097PA1] hypothetical protein HMPREF9570_00305 [Propionibacterium acnes HL043PA1] hypothetical protein HMPREF9571_00782 [Propionibacterium acnes HL043PA2] hypothetical protein HMPREF9568_00106 [Propionibacterium acnes HL013PA2] hypothetical protein HMPREF9586_00591 [Propionibacterium acnes HL083PA2] hypothetical protein HMPREF9584_00735 [Propionibacterium acnes HL092PA1] hypothetical protein HMPREF9588_00388 [Propionibacterium acnes HL025PA2] # 1 74 1 74 74 139 100.0 7e-32 MPGALVIGESLIDVVNDGAQGVSILGVPDECRDYRLPHRREPTAHRRIRVTEDSSPPRQC LRDWHHEGELPLDL >gi|302034483|gb|GL383152.1| GENE 107 92658 - 94727 1674 689 aa, chain + ## HITS:1 COG:ML1463_2 KEGG:ns NR:ns ## COG: ML1463_2 COG0171 # Protein_GI_number: 15827765 # Func_class: H Coenzyme transport and metabolism # Function: NAD synthase # Organism: Mycobacterium leprae # 332 687 2 359 359 500 65.0 1e-141 MKGNFHSTYDQGFARVAACTTTVHIGDPASNVAGILDTCRELSSRSVAIAVFPELCLTGY AIDDLLLQDVVLDAVLDAIETVRQASRSLFPVIIVGAPLQRGNRLYNCAVVIHRGQVLGV VPKSHLPNYREFYEKRHFAVGAGTTGMIDLSGRQKSHAASTEIPFGPDQLFRATDLPDLT FHVEVCEDLWVPVAPSSQAALAGAVVEVNLSGSPITVGKSRQRHELCKVTSSRNLQAYVY AAAGPGESSTDLSWDGQTMIYENGSLLAATDRFSPEPGYCLADIDLDLLRQERLRQGSFD DNALAQPAQAPWRTTIFTLDPPHDDIGLERPVNRFPFVPNDPDQLAQDCYEAYNIQVYGL RRRLESMGSPKIVIGVSGGLDSTHALLVAAKAMDQMGRPRTDILAFTMPGFATTDHTKNN ALDMCRALGIPCEVLDIRPAATQMLKGMSHPAGDGAEVYDVTFENVQAGLRYDYLFRIAN QRGGIVLGTGDLSELALGWCTFGVGDQMSHYGVNTGVPKTLIQHLIRWCISSGQFNEATN VVLESVLGTEISPELVPARPGEKIQSTQAKIGPYELQDFTLYHLLRHGMRPSRIIFLSHH AWRDASVGSWPPGFRDEDRHSYDLSAIKDWTRLFLRRFVGNQFKRSTLPNGPKVVAGGSL SPRGDWRMPSDAVVRAWLDDLETVPDERF >gi|302034483|gb|GL383152.1| GENE 108 94906 - 97152 1529 748 aa, chain + ## HITS:1 COG:SPBC16H5.02 KEGG:ns NR:ns ## COG: SPBC16H5.02 COG0205 # Protein_GI_number: 19112738 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphofructokinase # Organism: Schizosaccharomyces pombe # 4 744 186 936 942 625 45.0 1e-179 MRLTPTLPDGHGLRIGILTSGGDAQGMNAAVRAVVRSALSVGAEVYAIYEGYQGMIDGGD GIRRFGWDDVGSILNRGGTVIGTFRCKGMRERPGRLKAVRNLLEHGIDRLVVIGGDGSLT GLDVLRTEWTDLVAELVDTGQVSAEVAREHPALMIAGLVGSIDNDLVGSDMTIGADTALH RIVDAIDDLASTAASHQRSFVVEVMGRHCGYLALMAAVAGGADYVLIPERPPEDGWEDRM CAELKRGRQAGRRDSIVVVAEGATDRSGNRISSEYVRQVLEDKLGEDARVTILGHVQRGG RPSAYDRWASTWLGYHAVHEVLSTTPEAEGRVIGTGSNRIHRLPLVKAVADTKSVPGLIT EGRYNEAMRMRGRSFVEMDAIFTELSEPARTTSDTAGDADRKRVAIMHAGGPAPGMNTAA RAAVRLAISRGHTVVGIHNGFIGLATGDMSELAWSDVEGWAGEGGAELGTRREIPSTRDL YAVSRALEDHHIDALLVIGGYSAYEGIYTMMTERDRYPAFRIPTVCIPASIDNNLPGSEL SIGTDTALNVIVEAMDKIKESGIASRRCFVVETMGRDCGYLALMSGIAAGAERIYTNEDG ISLDDLANDVHWLRESFAHGRRLFLAVRNENASHNYTTDFIARLLEEESHGMYDVRQVVL GHMQQGGSPSPFDRLLANRLGYRALNLIDDELAAHQDGSWFIGVNESGMRPCSMDTMPSL IDAAHRRPREQWWLQLRTIARMVSDEVR Prediction of potential genes in microbial genomes Time: Wed Jul 20 19:24:10 2011 Seq name: gi|302034482|gb|GL383153.1| Propionibacterium acnes HL005PA4 genomic scaffold Scfld1, whole genome shotgun sequence Length of sequence - 90464 bp Number of predicted genes - 83, with homology - 79 Number of transcription units - 36, operones - 19 average op.length - 3.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 335 - 1810 1171 ## COG0671 Membrane-associated phospholipid phosphatase + Term 1824 - 1891 10.4 - Term 1815 - 1870 14.4 2 2 Tu 1 . - CDS 1883 - 3088 758 ## COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes + Prom 3378 - 3437 3.4 3 3 Tu 1 . + CDS 3592 - 4029 187 ## HMPREF0675_5044 hypothetical protein 4 4 Tu 1 . + CDS 4176 - 6710 2259 ## COG0308 Aminopeptidase N 5 5 Tu 1 . - CDS 6720 - 7967 817 ## COG0477 Permeases of the major facilitator superfamily 6 6 Op 1 . + CDS 7885 - 8103 116 ## 7 6 Op 2 . + CDS 8158 - 10410 1826 ## COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain 8 7 Tu 1 . - CDS 10397 - 12484 707 ## COG0147 Anthranilate/para-aminobenzoate synthases component I - Prom 12662 - 12721 2.5 + Prom 12558 - 12617 1.7 9 8 Op 1 . + CDS 12644 - 14977 1655 ## COG3256 Nitric oxide reductase large subunit 10 8 Op 2 . + CDS 14974 - 15771 233 ## PPA1974 hypothetical protein 11 8 Op 3 . + CDS 15768 - 16535 623 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs 12 9 Tu 1 . + CDS 16677 - 18020 1227 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases + Term 18105 - 18131 -0.7 13 10 Op 1 . + CDS 18205 - 19449 911 ## COG0477 Permeases of the major facilitator superfamily 14 10 Op 2 13/0.000 + CDS 19544 - 21031 1384 ## COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase 15 10 Op 3 . + CDS 21028 - 22095 788 ## PROTEIN SUPPORTED gi|149378138|ref|ZP_01895857.1| Ribosomal protein S7 16 10 Op 4 . + CDS 22180 - 22434 215 ## HMPREF0675_5032 hypothetical protein 17 10 Op 5 . + CDS 22450 - 23406 640 ## COG2267 Lysophospholipase + Term 23418 - 23453 -0.5 18 11 Op 1 35/0.000 + CDS 23555 - 24862 1396 ## COG1653 ABC-type sugar transport system, periplasmic component + Term 24867 - 24913 6.4 19 11 Op 2 38/0.000 + CDS 24991 - 25887 829 ## COG1175 ABC-type sugar transport systems, permease components 20 11 Op 3 . + CDS 25887 - 26813 855 ## COG0395 ABC-type sugar transport system, permease component - TRNA 26851 - 26927 74.1 # Phe GAA 0 0 - TRNA 26989 - 27062 85.8 # Asp GTC 0 0 - TRNA 27473 - 27548 60.3 # Glu TTC 0 0 21 12 Tu 1 . + CDS 27636 - 27848 102 ## 22 13 Op 1 . - CDS 27734 - 28900 231 ## PROTEIN SUPPORTED gi|145223395|ref|YP_001134073.1| NLP/P60 protein 23 13 Op 2 . - CDS 29035 - 29331 90 ## gi|313836177|gb|EFS73891.1| hypothetical protein HMPREF9621_01729 - Prom 29376 - 29435 76.7 + TRNA 29361 - 29434 84.6 # Lys TTT 0 0 24 14 Op 1 14/0.000 - CDS 29623 - 30945 1248 ## COG1653 ABC-type sugar transport system, periplasmic component 25 14 Op 2 38/0.000 - CDS 30956 - 31882 899 ## COG0395 ABC-type sugar transport system, permease component 26 14 Op 3 . - CDS 31875 - 32810 693 ## COG1175 ABC-type sugar transport systems, permease components 27 14 Op 4 . - CDS 32807 - 34306 1047 ## PPA1958 hypothetical protein - Prom 34515 - 34574 2.8 + Prom 34505 - 34564 1.6 28 15 Tu 1 . + CDS 34600 - 35733 516 ## COG1940 Transcriptional regulator/sugar kinase 29 16 Tu 1 . - CDS 35623 - 35943 82 ## 30 17 Tu 1 . + CDS 35897 - 37753 1387 ## PPA1955 hypothetical protein 31 18 Tu 1 . + CDS 37869 - 38648 810 ## COG0647 Predicted sugar phosphatases of the HAD superfamily - Term 38568 - 38606 1.1 32 19 Op 1 . - CDS 38727 - 40229 842 ## HMPREF0675_5014 phospholipase, patatin family 33 19 Op 2 . - CDS 40262 - 41227 853 ## COG0039 Malate/lactate dehydrogenases 34 20 Op 1 . + CDS 41075 - 41401 84 ## HMPREF0675_5013 hypothetical protein 35 20 Op 2 . + CDS 41402 - 42385 585 ## COG0053 Predicted Co/Zn/Cd cation transporters 36 20 Op 3 . + CDS 42471 - 42929 477 ## COG2131 Deoxycytidylate deaminase - Term 42954 - 43007 9.6 37 21 Op 1 9/0.000 - CDS 43013 - 43438 394 ## COG3412 Uncharacterized protein conserved in bacteria 38 21 Op 2 10/0.000 - CDS 43431 - 44087 500 ## COG2376 Dihydroxyacetone kinase 39 21 Op 3 . - CDS 44075 - 45076 856 ## COG2376 Dihydroxyacetone kinase 40 21 Op 4 . - CDS 45165 - 46442 1391 ## COG0477 Permeases of the major facilitator superfamily 41 22 Op 1 . + CDS 46647 - 47534 860 ## COG1575 1,4-dihydroxy-2-naphthoate octaprenyltransferase 42 22 Op 2 . + CDS 47622 - 47972 297 ## PPA2362 hypothetical protein 43 22 Op 3 . + CDS 47999 - 48664 280 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 44 22 Op 4 . + CDS 48666 - 50951 1113 ## HMPREF0675_5003 hypothetical protein 45 23 Op 1 . - CDS 51054 - 52580 249 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 46 23 Op 2 . - CDS 52577 - 52840 145 ## HMPREF0675_5001 hypothetical protein 47 24 Op 1 . - CDS 52984 - 54732 1218 ## COG2251 Predicted nuclease (RecB family) 48 24 Op 2 . - CDS 54734 - 55402 362 ## PROTEIN SUPPORTED gi|163754278|ref|ZP_02161401.1| 30S ribosomal protein S15 49 25 Op 1 . + CDS 55612 - 56256 215 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 50 25 Op 2 . + CDS 56253 - 57989 1434 ## PPA1941 ABC transporter permease 51 26 Tu 1 . - CDS 58055 - 59218 515 ## COG1169 Isochorismate synthase 52 27 Tu 1 . - CDS 59418 - 59903 371 ## HMPREF0675_4995 hypothetical protein - Prom 59959 - 60018 3.0 53 28 Op 1 . + CDS 60134 - 61396 1039 ## COG0644 Dehydrogenases (flavoproteins) 54 28 Op 2 30/0.000 + CDS 61493 - 61876 231 ## PROTEIN SUPPORTED gi|154175415|ref|YP_001407462.1| NADH dehydrogenase subunit A 55 28 Op 3 34/0.000 + CDS 61961 - 62527 423 ## PROTEIN SUPPORTED gi|154175216|ref|YP_001407461.1| NADH dehydrogenase subunit B 56 28 Op 4 22/0.000 + CDS 62524 - 63348 557 ## COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit 57 28 Op 5 15/0.000 + CDS 63348 - 64649 1199 ## COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7 58 28 Op 6 23/0.000 + CDS 64646 - 65431 747 ## COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit 59 28 Op 7 12/0.000 + CDS 65428 - 66762 1168 ## COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit 60 28 Op 8 18/0.000 + CDS 66759 - 69197 1644 ## COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) 61 28 Op 9 31/0.000 + CDS 69194 - 70516 1260 ## COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H) 62 28 Op 10 28/0.000 + CDS 70516 - 71112 499 ## COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 63 28 Op 11 30/0.000 + CDS 71112 - 71966 854 ## COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J) 64 28 Op 12 26/0.000 + CDS 71963 - 72262 395 ## COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) 65 28 Op 13 30/0.000 + CDS 72273 - 74159 1625 ## COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit 66 28 Op 14 22/0.000 + CDS 74177 - 75670 1318 ## COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M) 67 28 Op 15 . + CDS 75667 - 77283 1406 ## COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N) - Term 77128 - 77164 0.8 68 29 Tu 1 . - CDS 77289 - 77534 82 ## gi|313829355|gb|EFS67069.1| conserved hypothetical protein 69 30 Op 1 . + CDS 77476 - 78450 981 ## COG0142 Geranylgeranyl pyrophosphate synthase 70 30 Op 2 . + CDS 78481 - 79263 715 ## COG2243 Precorrin-2 methylase 71 30 Op 3 . + CDS 79299 - 80219 800 ## COG2301 Citrate lyase beta subunit + Term 80253 - 80288 -1.0 72 31 Op 1 . - CDS 80236 - 80667 250 ## HMPREF0675_4975 hypothetical protein - Term 80692 - 80723 -0.8 73 31 Op 2 . - CDS 80747 - 81058 350 ## HMPREF0675_4974 hypothetical protein 74 31 Op 3 . - CDS 81055 - 82449 696 ## PPA1916 ABC transporter permease 75 32 Tu 1 . + CDS 82430 - 82591 61 ## + Term 82624 - 82660 -0.2 76 33 Op 1 . - CDS 82563 - 83384 468 ## COG1131 ABC-type multidrug transport system, ATPase component 77 33 Op 2 . - CDS 83384 - 83626 321 ## HMPREF0675_4971 hypothetical protein 78 34 Op 1 . + CDS 83792 - 84721 441 ## HMPREF0675_4970 hypothetical protein 79 34 Op 2 . + CDS 84723 - 85343 185 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 80 34 Op 3 . + CDS 85340 - 86563 712 ## HMPREF0675_4968 efflux ABC transporter, permease protein + Term 86596 - 86636 9.6 - Term 86579 - 86629 12.1 81 35 Tu 1 . - CDS 86631 - 88613 1374 ## COG3590 Predicted metalloendopeptidase 82 36 Op 1 . - CDS 89270 - 89866 401 ## PPA1908 protein associated to putative adhesion protein 83 36 Op 2 . - CDS 89884 - 90342 95 ## PPA1907 protein associated to putative adhesion protein Predicted protein(s) >gi|302034482|gb|GL383153.1| GENE 1 335 - 1810 1171 491 aa, chain + ## HITS:1 COG:STM3595_1 KEGG:ns NR:ns ## COG: STM3595_1 COG0671 # Protein_GI_number: 16766881 # Func_class: I Lipid transport and metabolism # Function: Membrane-associated phospholipid phosphatase # Organism: Salmonella typhimurium LT2 # 80 356 114 331 355 83 29.0 1e-15 MKVLRTSVLGLACATALVSSVGVSPAQAAQPDESADPHVALLSEYDRYWTPKPLDKQNFD TAFRGDVTPQGSKILARNDEGVEQINKAGVDEANQAADRQGRSQQWRALRDATMFTDPLQ EDNDSLGPVLSKYVAEGLAQCTPANVHSCSLTHVARFLWSTGFQEVTNKSTGAAKKYFNY PRPYLADRSFADSGNPNNLRGLKKNLAIARVPSRIDVNHKRGGRALLTAGYDLMDGASGT NLTVSQAFPSGHTTAAYAYGLAMAEILPELGPEILTRASEAGNNRAVLGVHYPMDIMGGR IEGHSNVSAALTTNRLYVASLKAARTEVMAYLTRRCEADGHGDTVQACIGNVGANDKNGY YNTFTDSVSTTPVVDRASALKAYRARMTYGFDKASAYGGPAPATTAPVVPTGAENLLSTA FPTLSDAQRRQVLAATEIDAGYALDSSSGGWQRINLAAAMSAKVTVGKAGHVVKIETGNI KPEVVSAPQAS >gi|302034482|gb|GL383153.1| GENE 2 1883 - 3088 758 401 aa, chain - ## HITS:1 COG:Cgl2954 KEGG:ns NR:ns ## COG: Cgl2954 COG1249 # Protein_GI_number: 19554204 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes # Organism: Corynebacterium glutamicum # 1 395 58 439 440 309 45.0 8e-84 MPTKDLIDSASKRDGRDPASYFTSAVADRDTLIATLNRTNHAMLEGKVLLLDGVASFTGP HTVKVVAGDDEITVRAETIIVNTGSHPANLPVPGADGPRVHDSTTIQHVDPLPSQLVIVG GGFIGLEFAQMFARFGSQVTLLEAGETFVPALDTDIAERVRNMLEGEGVTVVTGAQVTSC DETGDHVDVVTDDQTFAADAVLVAAGRRPATEDLDLTAAGVATDERGYITVDDQLRTNID GVYAVGDVNGGPQFTYISLDDNRVLWDTLHDGPRRRDDRVAVPATTFLDPPLSQVGMTMR QARESGRSVLVATKDVATIAAMPRPKIVGQTEGVIRVLVDADDHTVLGATLWCIDSQELV NFVSLAMRLGVRYETLRDGIWTHPSSTEAFNEVLGVLEPLT >gi|302034482|gb|GL383153.1| GENE 3 3592 - 4029 187 145 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5044 NR:ns ## KEGG: HMPREF0675_5044 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 145 1 145 145 286 100.0 3e-76 MRSPRFLVVVTACVLFCFGLAGCSTIQSETDEDAAACADYAVPDALRKKLDSRGLTSPAA RADAAQTWFNETRPVDILIGGYWVVRSRRGTRFRVDFYRHMKSGSLLPPDAGKSASSVAC RIYDVAHGVTVQQVDCPKESLDQLP >gi|302034482|gb|GL383153.1| GENE 4 4176 - 6710 2259 844 aa, chain + ## HITS:1 COG:ML1486 KEGG:ns NR:ns ## COG: ML1486 COG0308 # Protein_GI_number: 15827782 # Func_class: E Amino acid transport and metabolism # Function: Aminopeptidase N # Organism: Mycobacterium leprae # 2 844 5 860 862 596 42.0 1e-170 MNLTREEARHRSEIIKVERYHVRIDVRGADADGATHFTSNTRVRFSTTEPDTFLDLLDGE IESVIVNGEEVEPEYDGSRIQLHGLHTHRENLVIVTAKLPYQHTGQGLHRFVDPADGKVY LYTHFEAADSRRMYSVFEQPDLKAHVDFDVIAPSDWRVASNQVHEDIREEEDGLLHDFAL TPRMSTYLTAIAAGPYVRFQDEWHSRDGSESIPLGILARASLAEYVDHEEIFKITKQGLA FYHRTFGYPYPWGKYDQIFVPEYNLGAMENPGLVTFTENYIHRGPATRSELAGRTNTILH EMAHMWFGDLVTPKWWDDLWLKESFAEYMGAHASVAGTEYREAWTNFAVGRKAWAYTADQ QSTTHPIVADIVDLEAARQNFDGITYAKGASVLKQLVAHVGVERFFSAARHYFRELAFSS ATLDDLIRHLEKACGRDLSAWVDAWLKTAGPDVLLPELTISDGVVSELAVVRDSIDVRTG RDVNRPHTLRVGLYSLHGEDLVRTNLIDLTISSPRTPVPEAAGKPAPDLILINDDDLTYA KVRLGATGTKTVLAHLSGLADPLARALVWSMLWNSVRDAKLKVQDYLDAVAAHGPKETEP AILATVLQQLRMAVENYLPDSARKTARRAEAARAWQGLDESELGSDLQRLWARHALALSA TDPDSAGRVRGLLDGNVAGLVVDPEMRWQSWMALAALGQASVEDLDAELERDHTKTGVAH HMAALTARPDDAAKQEAYRRLRTPGELSNEHCLALIEGLRTPLGAQTFANLNGSYFDDLE QIWQEFPIEMAQRLVVGLFPDGDTAETADRWLASHQSATGGLTRMVRERRDAASRAETAR DFNS >gi|302034482|gb|GL383153.1| GENE 5 6720 - 7967 817 415 aa, chain - ## HITS:1 COG:Cgl2173 KEGG:ns NR:ns ## COG: Cgl2173 COG0477 # Protein_GI_number: 19553423 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Corynebacterium glutamicum # 3 380 7 387 408 204 33.0 3e-52 MQRTSLGFMGLTAAAHFNAPASVVATFMVLQLAVYAVLQIPAGITVDRLGSRVVITAGSI VMTVGQVVMALTGSVGGAVLARVLVGCGDAFIFGAAIRLVPAWFPPKQTPLVTQLTGLLG QFGQVVSAVGLVAMVNSSGWRSTYLLAAGGAAVAAALAFLLIRDAPPGVEPERTDGNVKQ LPHQVAEVISHPSTRLAFWAHMSSNFAGIVFSLMWGMPYLTHAEGRSTATASTLMTVYVI ANAIAGPTAGILTSRHPIRRGTLIEAMIAASAVAWLIVLVWPGPAPLWMLFLLVICLGIS LPGGNVGFDVARTFQPGNRLATATGVAITGGFFFGLLEIEIIGLLLDMLCPGGRYTLSGF RWAMSTQLVLFAIGLAGLEVNQRRLYQIMADNGVTVPTWREALARQWRVVKQRRR >gi|302034482|gb|GL383153.1| GENE 6 7885 - 8103 116 72 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKVATTEAGALKWAAAVSPMKPREVRCMTANPYAITAVIHTTHVMVTRRRGLDVVVLTWL MVRRSVTPMRLE >gi|302034482|gb|GL383153.1| GENE 7 8158 - 10410 1826 750 aa, chain + ## HITS:1 COG:Rv0803 KEGG:ns NR:ns ## COG: Rv0803 COG0046 # Protein_GI_number: 15607943 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain # Organism: Mycobacterium tuberculosis H37Rv # 1 749 1 754 754 894 62.0 0 MADTVENAVSTPDVEQPWAELGLSADEYQRIREILGRRPTGGELAMYSVMWSEHCSYKSS KKYLRRFGDLPQQTPLGPLLAGIGDNAGVVDIGNGLAVTFKAESHNHPSYVEPHQGAATG VGGIVRDIMAMGARPVGVMNALAFGPLDAPDTARVLPGVVSGIADYGNCLGLPTIGGQTL FDPTYYGNPLVNALCVGVLRHEDLQFAKASGVGNLVVLFGAATGGDGIGGASILASESFA AEGESKRPSVQVGDPFMEKLLIECTLDLFNAGVVEALQDFGAAGISCATSELASAGDGGM HVELDRVPLRDPNLAPEEILMSESQERMAAVVRPDQLDRFMEICAHWGVAATVIGEVTDT GRLHIDWQGERIVDVDPRTVAHDGPVLDMPAARPWWIDELNEDDANALPRDNSGEGLAGA LLALAGSAQLCDRSWITDQYDRFVRGNTVLAQPNDAGMIRIDDNLGIALSLDANGRQTTL NPYLGAQLALCEAYRNVAVSGATPVAVTDCLNYGSPYDPDVMWQFDETILGLVDGCRELG VPVTGGNVSLHNRTGDESIRPTPLVGVLGVIDDVHRRIPSAFAHDGDAVLLLGTTKCEFG GSVYEDVIHAGHLGGMPPMPDLNAEKALAAVMVEASKRGLLSSAHDLSDGGLAQALVESC LQGGLGVSVSLPEGEPSVMLFSETPARAIVSLCGNGYREFKELCQEHGVPTARIGEVIDH GEIEVNGLFSLPLDEIERAWRKPIPTAMGE >gi|302034482|gb|GL383153.1| GENE 8 10397 - 12484 707 695 aa, chain - ## HITS:1 COG:alr3443_2 KEGG:ns NR:ns ## COG: alr3443_2 COG0147 # Protein_GI_number: 17230935 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component I # Organism: Nostoc sp. PCC 7120 # 218 685 25 493 514 330 42.0 7e-90 MILLVDNHDSFTFNLAHLLAEVSGIEPVVVRPEEVERAGILRRLADGEFDHVVIGPGPGS PHNDKDFKTAGQVIDASNKLPLLGVCLGHQGLGLRHGAQLQTIRPHHGIVSRIHHSRRGI FAGLPQDFEATRYHSLCLTTLGDQIVEHARAEDGAIMAFEVADRPHWGVQFHPESVMTQV GCQLMTNFLAIGSQPRHSEVRDKREPRNIQSRKCARTTARWTIHHQTVDIDLDEEATFSR LAGDGDAFWLDSATTRGDTGRWSVMGTASGAASELVSYDVITNTLTVNGRTQSGDVLDFL ERRLADGVSRRDPELDDIPFTGGYVGFLGYECKALTLGPNAHCSELPDAMWMRPASWIAY DHYRHHAHLLALDDRDTPGCNEAADLLDALAATLVKRPGSSEEPAPLTVPVEGSWRLSRG GYQDRVAAIQQALTRGDSYEACLTDTWTSRCDVDGWRLYRALRRRNPAPYGAYLRFTDPR VEVCSSSPERFLRVRDGIAESKPIKGTMARCDDPVEDARGIVDLQHDAKNRAENLMIADL VRNDLSRVCQPGTVEVPRLMAIESYATVHQMVTTVRGRLREDVGLVDVLRATFPGGSMTG APKERSVEILDGLEVGARGIYSGILGYLGFDRTADLSIVIRTVIRTGSQVTVGAGGAIVA ASQPDEEWREKNLKAAAPLAALTLSAGPGIPVTPP >gi|302034482|gb|GL383153.1| GENE 9 12644 - 14977 1655 777 aa, chain + ## HITS:1 COG:RSp1505 KEGG:ns NR:ns ## COG: RSp1505 COG3256 # Protein_GI_number: 17549724 # Func_class: P Inorganic ion transport and metabolism # Function: Nitric oxide reductase large subunit # Organism: Ralstonia solanacearum # 26 731 11 730 756 449 38.0 1e-126 MGDEGKKPEDTRRRPMVVSKGWVQGIALVMILGFTVMGILAYHTYNDSIPIPDKVVSTTG EVLFTHDDIVAGQEAFNNRGLMEYGSIVGHGGYLGPDFTADYLRRAATLTLDVRIKAREN QPHQANIKDWRTNRYDSRTGVLVLSRQQTAAYHHLVSYYTTYFGRNSHNLGLLADDIKGP AQARHLTDFFAWTAWGAAADRPGHSYSYTNNWPADPTVANRPTADMVVWSVLSLIVLIGG TGVMFAIYGRWSKNIGWHESETPSLSFIPPSQVGLTKSQRATSWFFFVIAVLFLFQTLVG AAAEHYRADISSFFGFDLAAWLPYNLARTWHVQLALFWTAAAFLAGGIFLAPFVSGKEPR RQHVLTYVLLGAVAFVVFGSLTSEALSVYGVSWAKGPVFGQQWEYIDLSKMFQLLLTLGM FLWVFIIWRAMHTRMRAESFGNMPWVFFFSALSIPMFYAVGLLAGTHTQLSVAEFWRFWV VHLWVEDFLELFTTVMVAYIFVMLGVVREKVALGVIYMDVILYSAGGVLGTMHHLYFSGT PSAHMAIGAFFSAAEVIPLTFLTVEAWGFMQLGARRESRSSTPFPHRWTVMFLVAVGFWN FVGAGVFGFLINLPIVSYYEIGTALTANHAHGAMMGVYGMMAMALAMFALRYLIPAWNDR LAKISFWCTNIGLAWMVVVTLLPLGILQLYHSVDAGYFEARQLNYITEHRNVVLEWLRMP GDLVFIIGGVLPFLWMTFQGLMHHREGRTVDELPVERLFIEEAPGEQGHAELPEATR >gi|302034482|gb|GL383153.1| GENE 10 14974 - 15771 233 265 aa, chain + ## HITS:1 COG:no KEGG:PPA1974 NR:ns ## KEGG: PPA1974 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 265 1 265 265 524 100.0 1e-147 MSPSLQVVLTCCYSLFLLTVAWLLDVLGRHSARMSREWKTTNFVYHDDRDGWKCHEDHWL WPASFDPQKRVVRYRGQHEICGRCPVKDTCSPTMTVREVTMPVDPWPYSEAGLFHRGMTV CVMVAALALPGGMLFVARTVAEVVTLIATIAIVCLALVPTAASIRRRPVDIPEGLPLETS VPDTGTAHDDGRVRVLGVHGQATTDRAGDEADRLIARYGSRWRSGRTRYRSVEQAAAVEA EVRGTYDRGRYYRGADDVDADRSRT >gi|302034482|gb|GL383153.1| GENE 11 15768 - 16535 623 255 aa, chain + ## HITS:1 COG:RSc0802 KEGG:ns NR:ns ## COG: RSc0802 COG0330 # Protein_GI_number: 17545521 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Ralstonia solanacearum # 8 246 6 244 249 256 51.0 4e-68 MSDLEWTFTTIALVILVIGFLISSFKIIPEYERGVVFRLGKLRGLHGSGLVFIFPGLDKL HRVDQRTVTLTIPPQEIITRDNVPARVNAVVLFNVTDPMDAVMNVENYAIATSQIAQTTL RSVLGRTDLDTLLAHREELNTDLREIIEVQTHPWGVDVSVVEIKDVEIPEAMQRAMAREA EAERERRAKVINARGEMQASGELRQAADELSKSPASLQLRYLQTLLELGADQNSTVVFPL PMDILAPFLRKDHGN >gi|302034482|gb|GL383153.1| GENE 12 16677 - 18020 1227 447 aa, chain + ## HITS:1 COG:MT2598 KEGG:ns NR:ns ## COG: MT2598 COG0624 # Protein_GI_number: 15842054 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Mycobacterium tuberculosis CDC1551 # 22 433 39 448 470 400 52.0 1e-111 MDLSHTFKDLSAKVDSGFDDAVEQLTRHVAVRSVSSQRPDGVRSGAEFVAAAAKEAGAAD VTVVTENDGLPAVIAHWPAPEGMPTVLLYSHGDVQPTGNLDEWHTEPFVATAKGERLYGR GTADDKGGVAAHLAAIRAFDGKPPVGVTLFVEGEEEIGSASMEVIIAEHKDELAADVIVV ADSVNWEQGVPSVTTTLRGVVDCIVEVSTLDHALHSGQFGGIVPDALTTLCRLIATLHDG TGEVTVDGLQGFAGPELDYPEDRLRAETGILDGVQWVGRGRAVEKMWTKPSVTVIAIDAT PVKDAINILPASARAKLSLRVAPGQDAGEAMEALVKHLESHVEFGAHIKVTRGQLGQPGV VPFTGDKAEVAKEAFRLAWGQEPVEMGTGGAIPLVTDLQHAFPEATVLVTAVTDPESRMH GIDESLHLGDFRRAILTEALMLAGLAE >gi|302034482|gb|GL383153.1| GENE 13 18205 - 19449 911 414 aa, chain + ## HITS:1 COG:AGl1094gl KEGG:ns NR:ns ## COG: AGl1094gl COG0477 # Protein_GI_number: 15890666 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 5 392 2 373 409 99 27.0 2e-20 MPSSSVSYRTLFSLPGGTFVAVSALARLPLAMSQLGTLLLVSSPQVSGRLGPGGLAAGVV ALAIAIGSPFFGALTDRHGQRVVLLAQSLVGGTALIAEGLAAVMGAAWPVVAVMGGLAGF FLPQIGTMARVRWRAMGAANPTMEAGILETSFAWEGAIDEASFALGPAAVGALAVLAGPV PGLIVAGAMLVVLGSWFALDPTSKLVEVHPGRTIRAGAPARSDRGGPGPLFTSGVAATCV GMIFMGMVFGSVQTGTTSLATDAGRPGLAGLFHALLSVGSAAAGLALPRLAHRLDLPARW RLFAAGLALFAAPLLLVDRLGPLVPILIILGMAAAPYMITLFSVAERSASAGRIGTVMTL LAAMNSLGYAFGTTLAGRLADWGGATPAYAVTWGVGVAATLLALPAASRVAPTH >gi|302034482|gb|GL383153.1| GENE 14 19544 - 21031 1384 495 aa, chain + ## HITS:1 COG:ML2206 KEGG:ns NR:ns ## COG: ML2206 COG0034 # Protein_GI_number: 15828184 # Func_class: F Nucleotide transport and metabolism # Function: Glutamine phosphoribosylpyrophosphate amidotransferase # Organism: Mycobacterium leprae # 19 478 54 517 556 590 61.0 1e-168 MARADGRLTADLNPQDHGPQDACGVIGIYAPGEEVSKLTYFGMYALQHRGQESAGMAVSD GRHMMVFKDMGLVSQVFDEATLNSLQGHMAVGHTRYSTTGASIWDNAQPTFRSRQGGDGL ALAHNGNLTNTGALEALIAERAPDTEVPHKDRMDSSNDTSLVTALMTTYDGTLEEVAAQV LPHLQGAFSLVFMDDHTLCAARDPQGIRPLVLGRLSSGWVVASETAAIDIVGGTFVREIE PGEMVAIDAAGLRTSRFAAARPKGCVFEYVYLARPDTVIAGRRIHNVRVKVGKILAQEHP ADADLVIPVPESGTPAAIGYADESGIPYGMGLVKNSYVGRTFIQPSQTLRNLGIRLKLNP LRDVIEGRRIVVVDDSIVRGNTQRQLVRMLREAGAAEVHVRISSPPVQWPCFYGIDFATR AQLIAPGLDVEDICRSIGADSLGYVSLDGLVRATHVDADNLCRACFDGVYPVPVPVSARA VLADATHTNPNQEQQ >gi|302034482|gb|GL383153.1| GENE 15 21028 - 22095 788 355 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149378138|ref|ZP_01895857.1| Ribosomal protein S7 [Marinobacter algicola DG893] # 7 339 10 337 354 308 48 8e-83 MSNESAYARAGVDIEAGERAVDLMKAHVAATRRPEVLGGLGGFAGFFDASVLGQYRHPVL ATSTDGVGTKVAIAQAMDIHDTIGFDLVGMLVDDLVVVGAEPWFVTDYIACGHVDPDRIA AVVKGIAAACTQAGCSLLGGETAEHPGLLTDDEYDVAGATTGAVEYDDILGPQRVQEGDA LLAVASSGLHSNGYSLVRKVLLADAGWALNRHVDELGRTLGEELLEPTTVYAADLLALIR QIEVHAMSHVTGGGLANNLARVLPDDLVATVDRSTWTPAPIFNLVQQVGNVSQPDIEATL NMGVGMVVVMPDANISAAIDLLAERGLSAWQCGHVSHRDATNELGAVLVSSHPCC >gi|302034482|gb|GL383153.1| GENE 16 22180 - 22434 215 84 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5032 NR:ns ## KEGG: HMPREF0675_5032 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 84 1 84 84 122 100.0 4e-27 MILGGNAAIDEARGSTHMGRGRAKAKQTKVARDLKYRSVNMDLESLERELRGESRQQEDP HDEDGLSDEYADLAEKYAHYGEED >gi|302034482|gb|GL383153.1| GENE 17 22450 - 23406 640 318 aa, chain + ## HITS:1 COG:Rv2854 KEGG:ns NR:ns ## COG: Rv2854 COG2267 # Protein_GI_number: 15609991 # Func_class: I Lipid transport and metabolism # Function: Lysophospholipase # Organism: Mycobacterium tuberculosis H37Rv # 28 318 22 332 346 152 33.0 9e-37 MRWLNDPLLDGFEYARIGLPHAAKAVGDPDGLLTASVVRRGEPRHGRAMLYVHGWSDCFY QAHLAEVVESWGYDFLGLDLRRYGRNLVPGQMAGWVRDLAEYDEEIDAAVSLLRADHDSV TIMGHSTGGLIVPLWVSRHPGWVDGVILNSPWIDLQGSFLTRALAGPVARSVRVAEPTTV LPIPSRDNFGHSIRREFGGEWDVPEVKDPSWAPFVTRAGWLAAILDGHQKVAQGLHIDVP LLVLISARSDLSATWKPSMKTADTVLDVDRLARAAVNLGRHLTLVRVRGGLHDVVLSAPS VRAGVFAEMERWVDAYLA >gi|302034482|gb|GL383153.1| GENE 18 23555 - 24862 1396 435 aa, chain + ## HITS:1 COG:BH3845 KEGG:ns NR:ns ## COG: BH3845 COG1653 # Protein_GI_number: 15616407 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Bacillus halodurans # 1 426 1 431 436 270 36.0 3e-72 MYAKKIAALATASMLVLAGCSSTTTDEDASQGSTTSSSTPKAGGAGGEVGVFTWWADGSE ARGLQALEKMFAKKYPHDRFKNLAVAGGSGSNAKAKLASDLKNGNPPSSFQGHAGAELTD YIDNEQIEPVDGIIKELGGESVFPKTLADRLTVDGHIYSVPVDIHRANVVWANSALLKKA GVTKTPTDVKGWIADMEKVKASGVATPLSIGGTWTQTELFESILAADMGADGYNKLFTPD GTWDSPEAKAAIEDYKKALTFTNTASDGDDWPAATDMVASGKAAYNVMGDWAVAEFDMKG KKYNADYTAFVVPGKEVVYDFLADSFTLPTGTKNPEATKDWLRFVGSADAQSTFNKIKGS IPARTDVKPDGFSTYQQTAMKDFKEVPIVSSIAHGAAVSLAWSSEINTAMSKFYQDKNAD NLASALVAAHDKYGK >gi|302034482|gb|GL383153.1| GENE 19 24991 - 25887 829 298 aa, chain + ## HITS:1 COG:BH3846 KEGG:ns NR:ns ## COG: BH3846 COG1175 # Protein_GI_number: 15616408 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Bacillus halodurans # 10 294 35 326 328 204 40.0 1e-52 MKRVRRWLPSFLLVLPSIILVGVFVYGFIGKTVFASLARVKTKSGRVKAPGGWANYSQLL ADGRYQHAMWNLLVLTVVFVAGTMVFGLLWALLLEKGVSGEGFFRSILLFPMAVSFVAAG VIWRWLLSPAKDGQAAGLNQLFVHMGMSGLQSSWYSSGKFNMAAMAIPAIWQLSGYIMAL FLAGFRGISEDQREAARVDGASEFKLYWNVLFPQLSPIALSALIIVGHMSMKMFDLIYAI AGQSSYTAEVPATLMWTQMFQLNNPTAGAVNATILLVIVAVVVVPYLVYTNRTERQGR >gi|302034482|gb|GL383153.1| GENE 20 25887 - 26813 855 308 aa, chain + ## HITS:1 COG:BH3847 KEGG:ns NR:ns ## COG: BH3847 COG0395 # Protein_GI_number: 15616409 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Bacillus halodurans # 35 308 4 272 273 202 45.0 5e-52 MTSTALPDEVRGDATVPGGTLADAPQRRRRRTAAQQTMSAVRYVLLVIFAVLVLTPAYAL LVTSFKTPSVYDQTTAWKFPRVWSVGGWQAAWGALAPALGRSLVMAVLAAIISAILGSLN GYVFAKWKFPGSHVIFVLFLFGMFIPYQAIMIPLSGMMLDIQQGAPWFAGIPTLVLCHVV YGIPICTLIFRNYYATAVPSEIVEASRVDGAAMISTYTKIVLPVSIPGFVVTLIWQFTSA WNDFLFALFLTNQNNGPVTFGLNALASGQNPNYPQIMAGVLIACLPTVVVYIALGKYFVS GLMSGSVK >gi|302034482|gb|GL383153.1| GENE 21 27636 - 27848 102 70 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLAFWADERLPACLPWWHRRRRQPIGIAGVTLVQLRRFELMRTGYIEERMGLRRTPARGL AASTMYPLPT >gi|302034482|gb|GL383153.1| GENE 22 27734 - 28900 231 388 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145223395|ref|YP_001134073.1| NLP/P60 protein [Mycobacterium gilvum PYR-GCK] # 256 381 221 346 348 93 40 3e-18 MGVVRPLRAGVATLATAGLAIGGSQFFAPPAQATNSSVKARVSARTAVNIRAQAGIHGKI VGVLERGQQLNQTGVPVNGWVPVAYRGHTAFIDHHYLSSVAWRPSPSSPSASSSPVGIAQ ATTYVYVRAGHSMQAAKVGVLSPGEKVGVTGRSAQGFSEVVYNGVHRWVGSRYLSPTAAK PSPKPAPAPKPSKTVYTTANLNLRNGASMSAAVYTSVSRGTALATTGRTTSGWTQITHRG RTLWASSKYLTTTTPPTPAPRPAPDPSVSPRGARAAIVNYATAQVGKAYIWGGEGPDGFD CSGLVLKAYQQAGINLPHYSGSQIERGHRISLDQIQPGDLFAASGGGHVGIYVGNGYMVE AANPRAGVRLSPIRSSMYPVRINSNLLN >gi|302034482|gb|GL383153.1| GENE 23 29035 - 29331 90 98 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313836177|gb|EFS73891.1| ## NR: gi|313836177|gb|EFS73891.1| hypothetical protein HMPREF9621_01729 [Propionibacterium acnes HL037PA2] # 1 93 1 100 110 101 64.0 2e-20 MRSDPGIRRPILGPLPQRVSIPTPKHQPVLQSWHELFRLAAAMATPRTITFMASGITPSQ SRLGDPQRRQRTPNNIFEILSHFSACRLAGDEKTLRSK >gi|302034482|gb|GL383153.1| GENE 24 29623 - 30945 1248 440 aa, chain - ## HITS:1 COG:BH0905 KEGG:ns NR:ns ## COG: BH0905 COG1653 # Protein_GI_number: 15613468 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Bacillus halodurans # 10 434 3 445 445 101 24.0 3e-21 MANLHSFSRRGLLLGGGVAMTTMALAACGESKSASSSSTSSGASDAKVSLTFWGWAPGYK EAVELWNKKNPNTQVTWIATEASRKIYPKMLTAVKANNAPDLAQVGYEALPSFVIQDAVQ DIKEWAGDVDKNFTAAGAKSVNLSGAVYGIPVDTAPMAMIYNKALLDSLKIKAPKTWDEF ASAARAVKKADPKASLTYFSSDPNFLAGLVRQAGGRWYDVTDSTVKVIMTQDAASRKVAD FWQKLINEGSIPVHEGYTPQVYKQMNEDTLISELYGIWDTALIAQNVPKGKGKWAVAPLP EWPDRPGGADMGGSATVVLKGSKNAEAAARFATWMSTDPQAVSILISKGGLWPASTTGLA NKALQKPDAFYSNDKVFVPFIDVAKNLKYDWVWGPTQVQAGQDMENNLVKVSKSYPITKA LADTQESTLAKLKKQGIKVG >gi|302034482|gb|GL383153.1| GENE 25 30956 - 31882 899 308 aa, chain - ## HITS:1 COG:AGl624 KEGG:ns NR:ns ## COG: AGl624 COG0395 # Protein_GI_number: 15890429 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 84 308 131 349 349 152 37.0 8e-37 MSEQNLMESTDHGTTGVVPPVKRNRGKGGKPQFGLTGASMLVVMIIAALYFLAPLWWFLV SATKSNGGLYSGNPFWFHDFSLAENFTDIVHRDGGIYFRWLRNSIFYSLVAGVGAGLISA MAGYALAKFRFRGRDAVFNCVLAATLLPIMLLTVPLYLMFSKVGLVDTIWAMILPSLINP FGIYLCRVYSATVPTEVLEAARLDGTSEAGIFFKIVLRIISPALATVFLIQFVSTWANFL LPTMMLTTPEKQPLAVGLVTWQATIQTGNPAPTNILIFGAFLSVLPLVALFLLLQRYWKT GLTTGGIK >gi|302034482|gb|GL383153.1| GENE 26 31875 - 32810 693 311 aa, chain - ## HITS:1 COG:BH2725 KEGG:ns NR:ns ## COG: BH2725 COG1175 # Protein_GI_number: 15615288 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Bacillus halodurans # 22 305 12 289 290 102 26.0 1e-21 MKVVTTSGHRRHSSTQPKLAPWLFLFPALLLFVFIFVLPIAYTIMQSFLKPGQKKLLYAP SGHTAPQFAGISQYTAAFQDSHFLLSIGRVLLIGVVQVPLMLLFSVCLALLLDARRVKAR QGFQLAYFLPYAVPGAISALMWTFLLQPQLSPFTSLFQKMGLNLNLLAPSVVPISVGNMI TWGFAGYNMVVIYSALKAPPNEILEAAHVDGASSWRTAWQIKVPMVRPAVIMTAVFSIIG TIQLYNEPAILRNSAPRIDPDFSPIMAVYNLVTTGDYFGAAARSVILAVITLVASFGFLK LQSRRGGAFDE >gi|302034482|gb|GL383153.1| GENE 27 32807 - 34306 1047 499 aa, chain - ## HITS:1 COG:no KEGG:PPA1958 NR:ns ## KEGG: PPA1958 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 499 52 550 550 983 99.0 0 MYDRVTASVMVLVDDHEIAANCWRVMEVAAPLVRYPESGGVYEIDVPGLVPDRLDPLGRF GARFLPDQWQSLVVELTTPLDPGSHTLDIRFVDDDGLIADATQRLEVVSVTGAVASFHHS EWIHVDALQAWSDVEAFDERHWDLIDKAVELAASAGVDTLFTPVLTPPIDVDPTSPPLAT QLVVVHRQGDRWSLDFDRLDRWSRIARRHGITHLEFSHLFCQGEVDRPADVYDANGNHLF GSHLSTEGYRDFLAVLLPALDQWSRRHGWSDALYWHVSDEPRANQYTSYRKAVDMVRRTV PGATVIDAVDDPRFATVVDVPVTIYGHLLECEAAGLDGMWVYTSCASTFWEPNRHLGMPL TRLRALGLLLWWHHTPGLLHWALNFWFDQFSRYLVDPNADTSADLAFPSGDSSVIYPRVD GSLVPSLRLKVLAQLHEDVRLLRRVEDAVGRPTIVDLIEHLAPGSTADLDHRYPLEPDFY RSLTANLLRLLKDIDGATV >gi|302034482|gb|GL383153.1| GENE 28 34600 - 35733 516 377 aa, chain + ## HITS:1 COG:BS_xylR KEGG:ns NR:ns ## COG: BS_xylR COG1940 # Protein_GI_number: 16078822 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Bacillus subtilis # 47 251 1 207 350 60 22.0 4e-09 MGQGRSDGAEQLGGRSLTDLRDHNQAAVLDCLVTATQPVTIRRLQELTGLTRPTVSAAMN SLLEQGDALEQESMHAGGRGGRRSRMFTLNATKRVQAGAAIRLQDVELGLADWHGEMLIS TSRPLRGGSPGALLDEALDDLLQELGLDSVDTMVIGALGSVGPDGRLRHNESLPEISDPD HFTALHDGRVGNVMIENDAVLAALAEQHVRGLADTESMVSLLIDASVGAGIILDGRAIRG SAGYAGEMSYLPGAGWATAHLDLVDAAARHDVSAEALFELAGSPHAPVWAEQAVDAFADA IVPGVAALLAALDPGLLVIGGHARPAHVRIARRLRASLRDDLPHLPCIEASRAGAHAVVQ GAVELALAQPEASTRQV >gi|302034482|gb|GL383153.1| GENE 29 35623 - 35943 82 106 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSAPNSARVTAVRNLIGSPTVRRWDHQVRTSSLADPHDVPTMSSAPMACDSQRRHARVVK ISFGTPSDPRSDLSSRGLRLCQRKLHSSLDHSMSTRSGRLNAWQMR >gi|302034482|gb|GL383153.1| GENE 30 35897 - 37753 1387 618 aa, chain + ## HITS:1 COG:no KEGG:PPA1955 NR:ns ## KEGG: PPA1955 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 618 1 618 618 1100 100.0 0 MRFRTAVTLALFGALIGGAPGAVAAPTASATTTTTYVDCSAPTPGRGTETSPLNSLTQLK SAFGPGRKVLLRRGSTCVGTVVINASGRAGADTLLGAYGAGKAPVIDAKASVRNRRSAIE VDNKSHFVIQDLTVRNGYFNDISVEAHNGEHITGVTIQRVTAQQNVWTGGANSVTKNMWV MGVGGISVMPCSAKAQISQVTINQVETSHTHYAGVQLGYHQLYPWSDFEAGVARDGYSVP TCFAADAKPYPHVTPRDGIKNAVIANSSLHDNDAMGIGVFGATDVVVRKNDLYRNGSGRN PNPTPGSNTMNGAGAWWDTTRNVTAEWNNAWGNREGWTGNDGTGLDADRNTVNSVIQNNY LHDNANYGVSVISAQNKASATIRNNVIAGNGRAFGSAPEVMVSSYDDGSGIPGQVSGLWI YGNTIFRASNKGDGAGIRLQAPFTTDAKVGIVNNIIRVNGAPYSFDANGNQAVGRPGNVV THNLTHPNSNWPGDINGLPGLADETARAHGWPTGGLYRLGPTSPAIGRALPLSNDVLPGN TAPMEGLVDFWGMAVPTDGSPFAIGADIHRTIVPPTTAPSSLPSIHAGTVPGNPAVAITA PSGKKNVVGLRTLPKTGV >gi|302034482|gb|GL383153.1| GENE 31 37869 - 38648 810 259 aa, chain + ## HITS:1 COG:Cgl2203 KEGG:ns NR:ns ## COG: Cgl2203 COG0647 # Protein_GI_number: 19553453 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar phosphatases of the HAD superfamily # Organism: Corynebacterium glutamicum # 10 255 7 252 275 313 63.0 2e-85 MRDPADIECWLTDMDGVLVHENHEVPGASDLINRWVDTSKRFLVLTNNSIFTPRDLAARM QASGLTVPEDNIWTSALATAHFLADQQPGARLYVIGEAGLTTALHEAGFILTDIDPDYVV LGETRTYSFEAITRAVRFIVDGARFICTNPDATGPSKEGPLPATGAVAAMIEAASKHKPY IVGKPNPMMFRSALNRIEAHSETTAMIGDRMDTDMVAGMEAGLLTVLVLSGITKREEVEQ YPYRPNIILDSVADLNELI >gi|302034482|gb|GL383153.1| GENE 32 38727 - 40229 842 500 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5014 NR:ns ## KEGG: HMPREF0675_5014 # Name: not_defined # Def: phospholipase, patatin family # Organism: P.acnes_SK137 # Pathway: not_defined # 1 500 1 500 500 982 100.0 0 MELPSWLGIPTLAFGLGSRTPQQGLVLAGGGSRASFQMGALRHLYDVVGITPTSMVATSA GSIVACTLAQWTDPAKQSAALRQLEAMWLEMTDQSDMFTPRAWFSRLLEIGPEWMSLLNR EAAKTKSQRPWLSLPFHRGPEQTKVPDPAEPVAGRDDDRLTGQARTLEIATRDDPITGGS WTPGVILQLLSALSRLSRDGGDISTIVRGAETSASTYRAGPILAKLLDRGFFKSELLATS GMSVRIATVALESGELRYMTESGVLVDRDNNPIGSSTFDVSRGVLASCSIPGVFRPVDLD GEHYVDGGLRENVPAEMAIGHLGVTNPYIITCSPQGTARESDFGSRNMLDLVMRTVSILT DETERDEVAYALNAGAVVIGPEISVHDSMTVDPGLLRINRDYGWMCSAEKHITPGPDEHE LIKDAVRTRVRGWQLEQAWLKEEASREDMDEMQHLKDHLRDIAARLPRDLAPDGVETWGR VLEGHGHPQAPEDVVIPWQV >gi|302034482|gb|GL383153.1| GENE 33 40262 - 41227 853 321 aa, chain - ## HITS:1 COG:CAC3552 KEGG:ns NR:ns ## COG: CAC3552 COG0039 # Protein_GI_number: 15896788 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Clostridium acetobutylicum # 6 313 6 312 320 229 40.0 4e-60 MPIKPHKLGIIGVGRVGDAVLSDAMMSGLFGEICVIDVNEKLAAGQALDQHHATALPNVT NVAVYAGDYDDLSNADVIIMTAGPSIDASNGPATGAARRELAATNGKIIRSTMTQITGRN HDAAIIICSNPLDALVHIASTEFDHPQGLVLGTGTILDSARMCRVVADHLGVDPDYVRGY MIGEHGPSGFPMFTGVNVGGVGFDGLAKLFDADPMDRDELTTRINDAGTAVFNLKGWTSA GIGQSAITIARSILLNEHAVYPVCTTLHGQYGHDGDVSMGVPCVIGATGVERILEVPLDD WEQEHLASTIKAIQETVEAAS >gi|302034482|gb|GL383153.1| GENE 34 41075 - 41401 84 108 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5013 NR:ns ## KEGG: HMPREF0675_5013 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 46 108 1 63 63 134 100.0 1e-30 MLIEGLTGGQLLIDVDDANLTEESTHHGVGQHCIPDSADPDNPELMWLDGHRNLLQSSRS TFAVHAYISIIHQAGFNFVTPLRHSGRAVRCAWPSLGRWLCRHCVPDR >gi|302034482|gb|GL383153.1| GENE 35 41402 - 42385 585 327 aa, chain + ## HITS:1 COG:sll1263 KEGG:ns NR:ns ## COG: sll1263 COG0053 # Protein_GI_number: 16330736 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted Co/Zn/Cd cation transporters # Organism: Synechocystis # 39 326 9 296 310 271 50.0 1e-72 MTVLFGEYRWGWDNARVTTIPDIPAVTSRHRPPEDLSRFAWLSIAAAIATILLKTLAWHI TGSVGLLSDAAESLVNLVAAIIALVALKVSIRPPDMNHQFGHSKAEYFSAGAEGMMIFIA AAVIIYSAVERFLYPRPIADAGVGLLVSVLASVINGAVAWVLLRNGRKRRSMTLIADGKH LLTDVWTSLGVLVGVGLVWLTGWQRLDPIVAFAVGINILVTGAKLVRQSGTALLDVSLPE EDNAAIRDFLAAHSNDHLTFHAVRTREAGYRQFLEFHMLVPGSWTVKQGHDVMEDLIDEI LEEWPEMRVSGHLEPIEDPRSYEDIDV >gi|302034482|gb|GL383153.1| GENE 36 42471 - 42929 477 152 aa, chain + ## HITS:1 COG:TM0404 KEGG:ns NR:ns ## COG: TM0404 COG2131 # Protein_GI_number: 15643170 # Func_class: F Nucleotide transport and metabolism # Function: Deoxycytidylate deaminase # Organism: Thermotoga maritima # 5 137 43 173 201 100 40.0 9e-22 MAEVNGKVVTVPDWDQYFLGIAEAVSARAKCTRRRVGALLVHEHRIIATGYNGAAPGRPD CLEGACPRGRLDYGEVPAFSDYDVPGSPGFCIAIHAEMNALLFATRDTAGSTAYVTDKPC SGCRKALAAAGVVRAVWPDGELGEDDLVNWQL >gi|302034482|gb|GL383153.1| GENE 37 43013 - 43438 394 141 aa, chain - ## HITS:1 COG:ZycgC_1 KEGG:ns NR:ns ## COG: ZycgC_1 COG3412 # Protein_GI_number: 15801428 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 EDL933 # 6 138 3 136 149 88 49.0 4e-18 MSDQGVGIVIVSHSCPLGRAAADLASQMLPGPEIPPIEVAAGLDDTTLGTDATAVSAAIE KVGNCDGILVLVDIGSAILSAEMALDLLDADIASKVKISTAPLVEGAVVAAVMASTGAEL EVVAAEAEKALDPKVSQLSND >gi|302034482|gb|GL383153.1| GENE 38 43431 - 44087 500 218 aa, chain - ## HITS:1 COG:ycgS KEGG:ns NR:ns ## COG: ycgS COG2376 # Protein_GI_number: 16129162 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Escherichia coli K12 # 8 209 3 205 210 149 44.0 3e-36 MGMLMSEISAATVSEWLKNYSAVISEHANELTDLDRQIGDADHGSNMARGMTAVAALDPE PFASAAGLLKKAGMTLVSTVGGASGPLYGTFFLRLSTVIKTDGEPTAQLLADALDAGLAG IVARGKAEVGDKTLVDALSPAVDAAKQVAADDGSAAEALAKAAEAANEGRDATIEMVARR GRASYLGERSKGHQDPGATSMALLVASAAHCLSGANHE >gi|302034482|gb|GL383153.1| GENE 39 44075 - 45076 856 333 aa, chain - ## HITS:1 COG:mll5289 KEGG:ns NR:ns ## COG: mll5289 COG2376 # Protein_GI_number: 13474411 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Mesorhizobium loti # 1 332 1 327 328 335 56.0 9e-92 MKKLINAVEDVVVDSLRGVAAAHPHCLKVDLDHRIVLRASCPVNGKVGLVSGGGSGHEPL HSGYVGRGMLDAACCGEVFTSPVPDQITEATKAVDGGAGVLHIVKNYTGDVMNFDMAAEM ASMEAGTRVESVVIADDVAVQDSLYTAGRRGVGLTVLAEKILGAAAEDKRDLDALLELAQ RINDGGRSFGVALTSCTVPAAGKPTFDLDENKIEMGVGIHGEPGRETATLGTAAEVAAQI VEPILADRDFTTTPVIAMLNGMGGTPLIEQYLVWGEIAKILAGKGVKVARTLVGNHITSL EMAGCSLTLLSADDDLLTLWDAPVETPGLRWGC >gi|302034482|gb|GL383153.1| GENE 40 45165 - 46442 1391 425 aa, chain - ## HITS:1 COG:CAC0458 KEGG:ns NR:ns ## COG: CAC0458 COG0477 # Protein_GI_number: 15893749 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Clostridium acetobutylicum # 2 389 9 394 409 163 29.0 6e-40 MFASLSIPNYRIYFSGTLLTNMGQWMARTAQSWLVLVILTHGNAAVLGWVMAVNFAPILL VTPWAGALADRMSKRRIMVTAQIVLAIDAAILSTLVLTGAVRLWMVFVIAAMDGLAGAFY SPATQAFVSELVPLKNLPNAVSLNSASFNGARLLGPGVGGLLIAAVGVGWVMAINVLCFI GFITTLLFIRADRLYVSPPSAEKARVRDGVRYVKRRPDLVILLAIGFMMGTFGFNFNISD AVMATQAFGKGSGEYGLLGSLMGIGSMVAALGAARRRPRLRWVELALLVYSVSMGLSALA PNYGIFAVLKMFVGWGAISTLITANAMVQTSVTPHMRGRVMSLWATLVMGGTPLVSPVVG WIGNAIGPRATVAWGAISLGITFVVITAVIMHNDRIRVVFDPSKRAPWLRQVRGKVTIDY VQQTK >gi|302034482|gb|GL383153.1| GENE 41 46647 - 47534 860 295 aa, chain + ## HITS:1 COG:Cgl0443 KEGG:ns NR:ns ## COG: Cgl0443 COG1575 # Protein_GI_number: 19551693 # Func_class: H Coenzyme transport and metabolism # Function: 1,4-dihydroxy-2-naphthoate octaprenyltransferase # Organism: Corynebacterium glutamicum # 3 283 12 289 298 230 49.0 2e-60 MATAAEWLEGARPRTLPTAIAPVVAGTAIAIADGGARWELATLCLVVALGLVVGVNFAND YSDGIRGSDGEDRVGPLRLVGSGVAEPSHVEAAAFACFGVSAVAGLIITIMTGHWWFIIV GLACILAAWFYTGGSHPYGYAGLGETFVFIFFGLVAVGGTVYVQADHVGTAGWVTACVIG AMACAVLVANNLRDIDGDRVSGKHTVATKLGHQGTRILYLVLVALACVGVIVVAALSTWW VLLGLLMVILLVSPVKALATKATGMALVPVLKNTGLAELLCAVGFLVGAMLDRPL >gi|302034482|gb|GL383153.1| GENE 42 47622 - 47972 297 116 aa, chain + ## HITS:1 COG:no KEGG:PPA2362 NR:ns ## KEGG: PPA2362 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 25 116 67 161 161 95 49.0 5e-19 MSVNRKIVGGGVVAACMGVTVLAAAPAPSKAVLEMYADSNFHGLIAKQTKVGYYNFNKNQ NDSLSSVKNQTPYGAAFWYDVNQKGHCWDYKPWTNDSSFWWKDHDEASSYGLGHRC >gi|302034482|gb|GL383153.1| GENE 43 47999 - 48664 280 221 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 5 221 5 222 223 112 29 7e-24 MAHPLKASDVHVSYVKGDEVLKGVDLVLHTGELILVRGVSGSGKTTLLNVLSGLLSPLRG TVCINGVDITKISESRRDAIRLHEMGMVFQHHGLVPDFTSRENIELVLRAREIKNSAAIA MDALKEVGVAELADRRPAEMSGGQAQRVGIARAIAGGHRIVLADEPTGQLDRANTDMIFK VLRHIVTDGADRAVLLSSHDPRACDYVDRVLDMEDGVLEEV >gi|302034482|gb|GL383153.1| GENE 44 48666 - 50951 1113 761 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5003 NR:ns ## KEGG: HMPREF0675_5003 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 761 1 761 761 1382 99.0 0 MWIVHVTRLVVSNWRTWLRVIPLALVVVALTVSSGITNARQLSDEQKNIASYGSTSGLFS LQEDVPPGTPVPIPRNNTLQASAPFPQLYSNINLVQYDDVAYQEMPMAGSATQGRYRLTS GRWPAKAGEVLATSTLGADDGSRLSAKAGDLHLTVTGHVEAVYDRAATLVLAAPGTWQSW RISRDDAGRAGIRGNGQIGFTSQEPGDVCSLLAETLKLAGDCDTTQTRSASEAHGLTPKA FVDQNLAWLVFGLLGAVVSGAALTALLRRIASPLLAIGVRRRSVSAMSKTVALLVAETVS LMSVALGQAVVAAARWYMAPRASAPLGPWRFPTVPLVMALVIGVLPAAMVNMVPSRRKTV KRRGINMNTARRLGWAALVLGCAVCLWGLLGADATFTAVAVVAGMCAVAGGLGAPFVLSR LVRTHRPVGRALAAHRALSSRGGWHCVFAGVAAGLVTATATGLLIVSALFSQANGQTSTG MPPGMALLHVSMEGVPALESAQVKQFSDALEGAKNITVHQVDDANISGSWWYFSKVDDVA VVTKLDDAQRDVLVSGGYLTNDPSRADPAHTVGLTDDLSWVKRISVRPKAGIPRGAGSAI LFTGLTPDQDRLTNEWAQAHGLGEFYVMAPRILGDVPLPTITIVATVTFIVLSAIMAGLL AKEERAANSDLVTSLKRIGLGRRWVDQVILVEVATTMLAALICGVISSVVAVWLTGRILS GALDLLGAAWWVFGALAAGMFGGSLLGAAIHRRYHFDMRAT >gi|302034482|gb|GL383153.1| GENE 45 51054 - 52580 249 508 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 257 479 131 354 398 100 33 3e-20 MSAKMRQILSTRYFSKLLELPQSWFDEELTGSITSKLTRSITNVTDFAKAFSNNFFTLLL TTFAVLIISAIYYWPLALLLAIVFPIYVWLTALTSRNWQTHQDVINHHIDTAGGRFQEVV SQIRVVKSYVTEASEQKQFNNHYDATVDATRQQSNHWHLMDTVRRVVLNVIFFGIYAIIF VRTAKGYFGVGDMILLIQLMTMARQPVQMMSYIIDVAQRAVAGSKDYFSVMETRPAHVPQ TATTTIREPEPGVPMISFNDTVFSYDGTNRVIDHATFDVSPGEKVALVGESGGGKSTLVN LLLGLYPVTEGAIMVAGNDISQVTPDALRRRIGVVFQDPALFSGSIRKNIAYGTEATDAQ IRDAAHRAYADRFIKRFSQQYDTLVGERGIKLSGGQKQRISIARALLKDAPILVLDEATS ALDTKSERWVQAGLESLMADRTSLIIAHRLSTISSVDRIVTLDAGRVDEIGTPAELAASG GIYAELLALQASSSKADRKRLERFGIKL >gi|302034482|gb|GL383153.1| GENE 46 52577 - 52840 145 87 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5001 NR:ns ## KEGG: HMPREF0675_5001 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 87 1 87 87 120 100.0 2e-26 MRSLTRILRFTSQLWKFYLGVVISAVIVAITQLAVPFVIARATDLAVAGVRGNDHHIRDI MLLAVVTSSSTSSTPCSPTSTDGWATS >gi|302034482|gb|GL383153.1| GENE 47 52984 - 54732 1218 582 aa, chain - ## HITS:1 COG:Cgl2866 KEGG:ns NR:ns ## COG: Cgl2866 COG2251 # Protein_GI_number: 19554116 # Func_class: R General function prediction only # Function: Predicted nuclease (RecB family) # Organism: Corynebacterium glutamicum # 251 578 160 460 471 90 29.0 8e-18 MKGPSSPILLDAWAARSCPVKTQNAYDPTLSEPVGDPRDDELFAGAEAHLTVICDALAAV TDAVDLRSVTLSVAGRRVATRRAIEAGAPVIVCPELPSSPQEHRTGSPNALVLAGKRADG GPGYLPVIVKYYLVLESHHTLAEFTWVSPLNDPDPRHARMSLDQTFRAGRERALIQAAHH WRLLEGLGLVATPDECPSHRRLVGLVGHDEIGILDDNLAVSWLDLDHKFIRTFSRSSASG WRRRSVLDRYDHEHTFRVSVAEHAIAGGEPMVAPIVVRECESCQWWAICEPRLDDADLSL RISKAPLDVREISTLRRLGVSTVDDLADADLDELLPVYLPEVQHRPRPEQRLRAAARRAR LIRQGVLLERNDEGPIEVASSRLELDFDIETSPDGRVYLWGFEVSDPERLLDSTTGDVPY YVAFSEFADMGDDDENALAARAIAWLDEILSAHPETIVVHYSDYEIVHLRHFGHVCQDVE TRQAVRRLLDSGRFVDLFTTIKAHFFGVNGIGLKVVANAGAGFSWRDPDPGGLNSQTWWD LAVHDPDPQVRESSRTRVMEYNEDDVKATLAVRRWLAERPSE >gi|302034482|gb|GL383153.1| GENE 48 54734 - 55402 362 222 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163754278|ref|ZP_02161401.1| 30S ribosomal protein S15 [Kordia algicida OT-1] # 1 214 1 221 221 144 37 2e-33 MFDGVAKRYDLMNQIMTLGAIDTWRDLVVAAVEPEPGQTILDLAAGTGTSSATFAARGAQ VYPTDISTGMLAVGKQRQPHLHFVAGDATCLPYADNSFDAVTISYGLRNVEDPQKALREM LRVTKPGGRVVICEFSYPTWAPFRHVYTKYLLAAIPAMAKLASSNRDAYDYLAESILAWP DQPHLADMMAEAGWQAIAWRNVCGGVVALHRGWKGSDEKEMA >gi|302034482|gb|GL383153.1| GENE 49 55612 - 56256 215 214 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 8 194 5 194 311 87 31 2e-16 MASRSTVLIAKDISKSYGDRIIIDHLSLTVHEGEAVALTGRNGAGKSTVLRMLVGADRPS SGTIEVLGKKVSETNPEFRRNVATVIDDLDFFPDLSVVEHLDLLARAHGLVDADALVDEV LEEVQLVPQSGQLPGTLSSGQRRRLGLATALVRSRKLLVLDEPEARLDVEGVAWLGKRLR EEMNHGLAIVMASHEPALVETLGARTVELGGPRG >gi|302034482|gb|GL383153.1| GENE 50 56253 - 57989 1434 578 aa, chain + ## HITS:1 COG:no KEGG:PPA1941 NR:ns ## KEGG: PPA1941 # Name: not_defined # Def: ABC transporter permease # Organism: P.acnes # Pathway: not_defined # 1 578 1 578 578 910 99.0 0 MSRRNSKHSKPRPKASPSEPQNARAEAAVVPDPELVIAHRPDEFFGGQADERQLSLLMGD WRKGRTTRNIWQAIGDAYVLVFSLVVVLAMVISLIVQAQGQASGCTSTGCQTARGLLAWA ALSGVLAFALAAARVFGPVLASAAEGFWLMDAPIDRAKFLAKRLRAAVLVSVIAGAVLGA LVAALTGAAGKAVVAWTLASALGAAGVVSFAGAEQGTERTWPVKAVEAVAGLAGLAVLLG VISTASGWYAVPMSSDTNLTSAWAVAGAGAVLLVVTFVLARLRLNRIRRARLMAGGSLAS GMQGAAFALDFALIRDILQEREAIERGQVRPTRGRGEGLRALVWRDVQRVMRSPKPLLTL IVTAVVPYAVSALGFGALTVPVSALVLVAALVPFFTSLRVLTRSKGLVRCLPFTTSQVIS AASVVPAVVAALWAIAVIPAFHGVGSAVSRPWEQAVMYGLVTAAGGLAGAIRWVSAKPAD YSSPMVATQAGAMPPGLMFNLIRGLDMVALITIPLVLGWSPWVSVFIAVVVFGFLRMGGM NQQDLAEMREESQRQLAEARQDTRGGKAEKKVIERKRR >gi|302034482|gb|GL383153.1| GENE 51 58055 - 59218 515 387 aa, chain - ## HITS:1 COG:lin1784 KEGG:ns NR:ns ## COG: lin1784 COG1169 # Protein_GI_number: 16800852 # Func_class: H Coenzyme transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Isochorismate synthase # Organism: Listeria innocua # 54 345 103 420 462 90 25.0 6e-18 MTPNDSVCFLHRNYGMVGLGEVTRFETDSPAAADVWWEALCDDLEHETEMPGAEATGPVA FGSFTFDPDRSSSRSVMILPKTIIGRWPGYSWLTQLSWDSITDDSPHQQSVPRPPGAVTV RDGVVSERSWRQVARLVQDIMSPGELDQIVLMRDVEAKAASSIDPRWIVETLRRQFPNAY TYLVEGSVGTTSKLTVGVSKSLITSRVLTHSPATDANHQTLLTALQGRGPLAAYHDEIVG RTCARLEQFCDTVHVPDCPGCVYNDASTYLVTDVTGINSPDQGSCLALVQALCPPAFVTG LPPHCALSVLAEVEHVDRGRVSGPTGWVDSLGNGQWVTDCRGGQIDATDPSLVHIFSGHP VGHDDDADVLSAEAEHRIDVLRDLFLT >gi|302034482|gb|GL383153.1| GENE 52 59418 - 59903 371 161 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4995 NR:ns ## KEGG: HMPREF0675_4995 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 161 1 161 161 277 99.0 1e-73 MFVQIAASLAAASSIALGIPGAATPIDESQLPVGPQVSVTDFAQHTGPFAASSPLTITVK PGAPCVRADGYQESMVTRVLDDKGHQVWTGTFDESKLIGGTGLGTATFHVGSPAAAFNFH GSERTTYRTLSYCAYPHYVNGTRERLSQVSVKTFMVDPALN >gi|302034482|gb|GL383153.1| GENE 53 60134 - 61396 1039 420 aa, chain + ## HITS:1 COG:Cgl0465 KEGG:ns NR:ns ## COG: Cgl0465 COG0644 # Protein_GI_number: 19551715 # Func_class: C Energy production and conversion # Function: Dehydrogenases (flavoproteins) # Organism: Corynebacterium glutamicum # 8 408 9 398 424 194 34.0 2e-49 MTSQMESDVVVVGAGPGGSATAAHLARRGLHVTLLEKVTFPRDKVCGDGLTPRAVKQLIR LGIDVSEEAGWKHTEGLRIHGGRIAPFVLPWPELADYPNFGMVCRRTVLDERLARHAESQ GVTLVEGANVTDPILDPSGRICGVRTSDGTEYSAPVVVAADGNSSRLGLAMGLHKRDDRP MGVAVRAYYRSALSDSRNLESWLELWDGAPQKSDLLPGYGWAFPEGDGTVNIGLGMLDSS AAFGRTDYRSLMKRWLSHLPAEWTLDEEHREGPIRGAALPMAFNRQPHYRDGLLLVGDAG GMVNPFNGEGIDYAMEAGEMAADAIAEAHYRGHRTPAAEKALQGYPRALQRHFGGYYRLG TIFVRLIGDPRVMKMCTTYGLPRRRLMKFVNKLLANLTDARSGDLDDRIINTLTRIVPSL >gi|302034482|gb|GL383153.1| GENE 54 61493 - 61876 231 127 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|154175415|ref|YP_001407462.1| NADH dehydrogenase subunit A [Campylobacter curvus 525.92] # 18 126 17 125 129 93 41 3e-18 MVVTKGGEMNGYAPLVGMVILGAVFVLATITVNVLLAVKRPNRAKHEIYECGIEPTPQPA GGGKFPVKFFVVAMLYIVFDIDIMFLYPWAVDFNHLGVFALVEMVLFVAMVFIPYLYIRR RGGLDWT >gi|302034482|gb|GL383153.1| GENE 55 61961 - 62527 423 188 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|154175216|ref|YP_001407461.1| NADH dehydrogenase subunit B [Campylobacter curvus 525.92] # 2 155 3 155 170 167 50 2e-40 MREMAEYDADVPAGIVMTSMEAIVGWLRKTSFWPLTMGLACCAIEMISYGGPRADAARWG HEVFRASPRQADLMIVSGRVSQKMAPVVRQLYDQMPEPKWVISMGACASSGGIFNNYAVV QGCDHIVPVDVYLPGCPPSPDMLIDAVFKIREQIQHWPLMGHMSEVEAAKEKKALDAKTT LEQKGLMR >gi|302034482|gb|GL383153.1| GENE 56 62524 - 63348 557 274 aa, chain + ## HITS:1 COG:Rv3147 KEGG:ns NR:ns ## COG: Rv3147 COG0852 # Protein_GI_number: 15610283 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase 27 kD subunit # Organism: Mycobacterium tuberculosis H37Rv # 30 274 2 236 236 241 52.0 2e-63 MSDKPTPRGAAGGSDSGDRIPDGRNFLDPSHPDQVHTPAKGREWTDRRIDTRKGMWGATS GPGDTSGYGGIVRTVEISGNSERLYGGWFDEVADRMAELVPDFSDGLTVVDRGEITFFVR PEKLLELVKVLRDDDALRFESCTSLTCVHYPHMAGREMHVVYNLLSMTHNRRIRLEVALA DPGQEDVARTGRSDVDSLPHVPSVVSVYPHADWQEREAWDMFGVIFDGHPALTRILMPDD WVGHPQRKDYPLGGIPIEYKGAVVPPPDQRRSYN >gi|302034482|gb|GL383153.1| GENE 57 63348 - 64649 1199 433 aa, chain + ## HITS:1 COG:Rv3148 KEGG:ns NR:ns ## COG: Rv3148 COG0649 # Protein_GI_number: 15610284 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase 49 kD subunit 7 # Organism: Mycobacterium tuberculosis H37Rv # 8 433 17 440 440 559 60.0 1e-159 MSENHEYLSQGGDWAQIVDEAAERGDETVVVNFGPSHPSTHGVMRLIIELDGESVSDLRV GIGFLHTGIEKNMEFRTWTQGVTFMTRCNYVANFFNELVYCLAVEKLLGITDDVPERARV LRVMITELNRISSHLIAVGTGGLELGASSVAEVGLREREIILEFNQAVTGLRMNNAWIRP GGVATDLPETGLDQLRDLIKRMEKYLPEIGQFCNENPIFKARTQGIGYADLSTCMALGVT GPALRATGLPWDLRKTQPYCDYDTYDFDVATWDTCDCYGRFRIRLEEMDQSVRILKQCLK RLEDTQGDRHMVEDPHIAWPAELALGPDGQGNSNEHIRHIMGESMEALIHHFKIVTEGFR VPAGQVYQAIEGAGGELGCHLVSDGGVRPYRSHLRDPGFVNVQSLPAMCEGGMLSDVVPS LASLDPVMGGVDR >gi|302034482|gb|GL383153.1| GENE 58 64646 - 65431 747 261 aa, chain + ## HITS:1 COG:MT3237 KEGG:ns NR:ns ## COG: MT3237 COG1905 # Protein_GI_number: 15842725 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase 24 kD subunit # Organism: Mycobacterium tuberculosis CDC1551 # 46 244 46 245 252 209 49.0 4e-54 MSDREPVNLGYPYVESFHSDFSGTGGVDQTDRSTNIDEHTIEEMHQIASRYPDSRSALLP ILHLVQSVDGRISPVGIETAAEVLGITTAQVSGVATFYTMYKKHPAGQHHIGVCTTALCA VMGGEEVLARVEKKLGIKEGQTTPDGKFSLERVECNAACDFAPIMMVNWEYMDNMTPIRA EEILDSLARDEEVHSTRGAKITSWREAERVLAGFPDGRADEGPSAGEASLQGVRLAKQSG WKAPDPNNLPAPAEPVEEEKK >gi|302034482|gb|GL383153.1| GENE 59 65428 - 66762 1168 444 aa, chain + ## HITS:1 COG:MT3238 KEGG:ns NR:ns ## COG: MT3238 COG1894 # Protein_GI_number: 15842726 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit # Organism: Mycobacterium tuberculosis CDC1551 # 4 416 7 426 445 601 66.0 1e-171 MTDPLTPVLSANWDEERSWKLLNYERQGGYTGLRKALTMPPDDVVSLVKDANLRGRGGAG FPTGMKWSFVPKDNPNPTYLVVNGDESEPGTCKDMPLMMASPHTLVEGVIIASYAIKAKM AFIYIRGEVLHVVRRVQQAVREAYSAGYIGKNILGSGYDLDVVVHAGAGAYICGEETALL DSLEGRRGQPRLRPPFPAVAGLYASPTVINNVESISTVPSILRNGKEWFKSMGTEKSDGF TIYSLSGHLAHPGQYEAPMGTTLRQLLDISGGMRQGHELKFFTPGGSSTPILTKDDIDLP LDYEGMAGAKTMLGTKALQCFDETTSVVRVTLRWLEFYKHESCGKCTPCREGTWWVVQML RRIEAGEGQEGDVDKLMDIADNIGGRSFCALADGAVGCLRGAIGHFRDEFEAGCRGIPAW QYLPYERSSIFNDADRRVLEGAGA >gi|302034482|gb|GL383153.1| GENE 60 66759 - 69197 1644 812 aa, chain + ## HITS:1 COG:Rv3151 KEGG:ns NR:ns ## COG: Rv3151 COG1034 # Protein_GI_number: 15610287 # Func_class: C Energy production and conversion # Function: NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) # Organism: Mycobacterium tuberculosis H37Rv # 8 800 15 804 806 717 51.0 0 MSENKPVELVTCTIDGQQVSVPKGTLIIRAAESIGTAIPRFCDHPLLDPAGACRECLVEI PDAGNGRGFPKPQPSCTMPVAEGMVVKTQVSSEMARKAQKGMLEFLLINHPLDCPICDKG GECPLQNQAMANGRGESRYDGVKRTYPKPINISAQVLLDRERCVLCQRCTRFADQIAGDP FINLQERGAVSQIGAYQGDDFNSYFSGNVIQICPVGALTSAEYRFRSRPFDLVSTVTTCE HCAAGCQLRTDHRHYEVKRRNAGNLPDVNEEWNCDKGRFAFRYGRGDDRVTTPLVRHNGV LEPASWAEALQTAAAGLTKAGTSVGVLTGGRLPVETCLSWSRFARVVLGTNNVDFRSRPH SAEEAAYLAARVAGHSLEESVTYADLETASRVVLVDLEPEDECPMIFLRLRKAWRRHKAT ITVVGTHLSNGSAKIGAELARCLPGQEPEALAQLVADGTIGEGTIVLVGERAATRPGTLS AINDLDSTVRVAWVPRRAGEMGAIEAGLLPQLLPGGRLVDDAKARVDIAAAWGVTNLPTQ PGLDTAGMLAAAQAGKLDALVVSGVELADMPDPTGAREAVENCGFVVSVEQRFSEVSARA DVVLPVCLLEETSGTFLDWEHRPGRVRVVNKQPATPMNEIRVLDALSSQMGSVSGLATVA QAHKAWRDLGQWSGGHPKMESTSPLVPQAPMVEAGSVGRVLETWRQLLEGSASLTGADAL VATAPAPVAVIDPLTAEQLGVTNGQLIDVCGPISLRVPVKIDTTMTAEAVWIPSLRGDST APQSRTTVPDAPGTVVSLSAVETETSREAGVA >gi|302034482|gb|GL383153.1| GENE 61 69194 - 70516 1260 440 aa, chain + ## HITS:1 COG:MT3240 KEGG:ns NR:ns ## COG: MT3240 COG1005 # Protein_GI_number: 15842728 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 1 (chain H) # Organism: Mycobacterium tuberculosis CDC1551 # 9 412 7 399 410 343 48.0 4e-94 MSPLEATIDPVWLIIVKVVILFVILLAWTIFNVWFERRVLAKMQNRIGPIMNSAWAGGVF QAVGDGLKLIFKEMLTPKGADKIVFNLAPVIAGIACFASWSVIPLGGQVSMFGHTTRLQI TDVPVAVLFILAVASIGIYGVVLAGWSSAGTYSLLGSLRSSAQMISYEVAMGLSLVTVFI FSGSMSTSQIVESQANHLVVGGFNTHIAGHYWLLLIPSFVIYVITMFGESNRLPFDLPEC ESELVSGYITEYSGFPYGMYFLAEYINMATLSAVCTTLFLGGYRAPWPLNYFGVIDSGWW GLLWFFLKTQLVIFFFVWVRAAIPRFRYDHFMDLGWKVLIPVSLGWVLMIAAWRTVINQG WGRNPVFLVVVGVILVALIVWAFMGGKTDSTADEAPDEPFDAFAGGYPVPPLPHQVQAPL AGAATATTVARRDHDENGGL >gi|302034482|gb|GL383153.1| GENE 62 70516 - 71112 499 198 aa, chain + ## HITS:1 COG:MT3241 KEGG:ns NR:ns ## COG: MT3241 COG1143 # Protein_GI_number: 15842729 # Func_class: C Energy production and conversion # Function: Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) # Organism: Mycobacterium tuberculosis CDC1551 # 1 162 32 191 211 226 67.0 3e-59 MGAWSGFGITFETMFRKSFTQGYPEKGKEKPMPPRMHGRHQLNRWPDGLEKCVGCELCAW ACPADAIYVEGADNTDEERYSPGERYGRVYEINYLRCILCGMCIEACPTRALTMTNDFKM ADTSRAKHIWTKDELLAPLKEGMEQPPHPRRLGDDEDDYFNGLPPSGQDDVRTGPANSGA TAHRDDDNDTQHKDEEAA >gi|302034482|gb|GL383153.1| GENE 63 71112 - 71966 854 284 aa, chain + ## HITS:1 COG:MT3242 KEGG:ns NR:ns ## COG: MT3242 COG0839 # Protein_GI_number: 15842730 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 6 (chain J) # Organism: Mycobacterium tuberculosis CDC1551 # 11 254 10 242 262 182 49.0 6e-46 MTTGLPLLAGLVPMVTASQWAFWLLAPIMVLAALVMVFAKKPVHSALSLAVVMICLAVQY ASQEAPFLFVVQIIVYTGAILMLFLFVVMLVGVDSTDSLKETLKGHKVAAMIAALAFVVL LILAVGNAVTTGVIGTDHPVGLGQANTAGGNNVKSLAELVFTKYVIVFEATSALLITAAV GTMVLAHGEADKKKSQRERVTDRMAAYAEHGSHPGVRPNSGVYARTNQIGAPALLPDGTV AQDSISGTLATRGAIIDAGELKAPTHRAFASISAARHEVQGELE >gi|302034482|gb|GL383153.1| GENE 64 71963 - 72262 395 99 aa, chain + ## HITS:1 COG:MT3243 KEGG:ns NR:ns ## COG: MT3243 COG0713 # Protein_GI_number: 15842731 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) # Organism: Mycobacterium tuberculosis CDC1551 # 1 98 1 98 99 108 69.0 3e-24 MNPNDYLVLSAILFAIGIVGFLTRRNALVAFMSVELMLNAANLALVTFAHVHGSLDGQVG AFFVMIVAAAEVVVGLAIIVTIFRSRRTTSVDDTNLLKF >gi|302034482|gb|GL383153.1| GENE 65 72273 - 74159 1625 628 aa, chain + ## HITS:1 COG:MT3244 KEGG:ns NR:ns ## COG: MT3244 COG1009 # Protein_GI_number: 15842732 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit # Organism: Mycobacterium tuberculosis CDC1551 # 13 611 11 616 633 544 53.0 1e-154 MTVLETGLFNVAWFMIAVPLVVAALLLVLGRRSDAWGHVLATVAPIVAFVIGLVLFIDLL GRGGASRAVDVGVYRFIDVGAWDLRVGLLIDQLSILFVLLITFVGSLIHIYAIGYMAHDT DRRRFFAYLNLFIAAMLTLVLADNYLILFVGWEGVGLASYLLIGFWFGRPAAARAGNKAF IMNRIGDLGLTMAIFTMLAQFGSVRFSDVSAKASGLTSTWATLLGFMLLLAACGKSAQVP LQAWLLDAMEGPTPVSALIHAATMVTAGVYLVVRSHEIYAHTGAASLAVAIIGTVTLLFG AWIGSAKKDIKKVLAGSTMSQIGYMMLAAGLGPAGAALAIFHLLTHGFFKANMFLGAGSV MHGTGDDTDMYHFGALSKVMPMTFWTFACGYLAIIGIPGTSGYFSKDHIIEAAFDKGAVF GVLALIGAGITAYYMTRLMMLTFLGTKRWRADVHPHESPAVMTIPLIVLAILSIFAGAFM NNWIGDWLAPATGAEVEHVGMWHMGVIGVVTLVVVILGIVAGWLLNRHNVPNEEPETHDP LLVAGRHDIYGDDINDVVVVKPGRWLAGGVAGFDRSVVDGLVNGAGSVTTACSQIIRKVQ NGYVRSYGLMMVVGVVVVGLVVVLGRMA >gi|302034482|gb|GL383153.1| GENE 66 74177 - 75670 1318 497 aa, chain + ## HITS:1 COG:Rv3157 KEGG:ns NR:ns ## COG: Rv3157 COG1008 # Protein_GI_number: 15610293 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 4 (chain M) # Organism: Mycobacterium tuberculosis H37Rv # 4 492 5 535 553 374 45.0 1e-103 MSFPILTVIALLPFVGGVITMMLRGAAARATGMVFSLVTLVLGVYAFIVGVNGTNLSETH RWIRAVGAWYALGGDGLSLTMILLVVILVPVVLLAEWHVGDDETARWSTGAFFGLALMLE GLAIYCFAATDVLLFYLMFEATLIPMYFLIAGWGGPRRGRAAMKFLLYSLAGGLVMLFAV IGVGVHGGSFLLSDLAKVDFSGAIGKELFVGFFIAFAIKAPMVPVHTWLPDTAEQATAGA SSLLVGLLDKIGTFGMLRLCLGLFPAASDWATPFVLTLAIISVLWGAMMAATSSDLMRFV SYTSVSHFGFMVIGIFALTTTSITGSIFYMFNHGFSTAALFLVLGFLVRRGGTAKVDGYG GVQKVAPVLAGTFLFAGLATLSLPGTGNFVSEFMALAGAWSRHPIYVAISTIGMVLAAVY VLVTYRRTMTGPVQGVSEQVSDLNGREKLVLAPLIILLLVFGFFPRPMLHAIEPAATAAM TQVHATDPAPVVKEGLK >gi|302034482|gb|GL383153.1| GENE 67 75667 - 77283 1406 538 aa, chain + ## HITS:1 COG:Rv3158 KEGG:ns NR:ns ## COG: Rv3158 COG1007 # Protein_GI_number: 15610294 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 2 (chain N) # Organism: Mycobacterium tuberculosis H37Rv # 20 538 5 531 531 352 43.0 1e-96 MNPALLITASGLPALLDVAAPHLEWGPLAPVFVLMAGACVAVLVEAFVPRSGRRPTQIIV TVATLVVAIASTLTTIARGTRIVAGQGTLAPDGPTLATWVILLATGLGTVVLFAERVGTT QTAFVASASSVPGSPLEAKAEQEHREHTEVYPLLMFAALGMMCFAAANDLIMMFVALEIF SLPLYLLCGMSRRRRLLSQEAALKYFLLGALSSALFLYGIVLLYGCAGSFKLGDLAAAGV TQVGSSKLIVAGMILVAVGLLFKIGAVPFASWTPDVYTGAPTPVSGWMAVATKLVALVGL MRVLYVGLGAMRWDWQIVLAVVAVASMGVGAIVGLAQTDMKRLLAYSAIAHAGFVLVGVV GAWTTQTGMAEGQTGSVSSVLVYMTAYGLASIGFWLLILMVRRAGGESTEIASWAGIGRS HPWIGVLVVIFVLSFAGIPLTAGFTGKLVVFLAGWRGGYAWLVLIGVLFSLVAAAFYLRI IVVVFFRSAKEGDDPVEVAEPSIAGWITLIVCAVFTIVMGVAPQPIIDLFNQASTFLR >gi|302034482|gb|GL383153.1| GENE 68 77289 - 77534 82 81 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313829355|gb|EFS67069.1| ## NR: gi|313829355|gb|EFS67069.1| conserved hypothetical protein [Propionibacterium acnes HL063PA2] conserved hypothetical protein [Propionibacterium acnes HL002PA2] conserved hypothetical protein [Propionibacterium acnes HL005PA1] conserved hypothetical protein [Propionibacterium acnes HL027PA2] conserved hypothetical protein [Propionibacterium acnes HL030PA1] hypothetical protein HMPREF9588_02545 [Propionibacterium acnes HL025PA2] # 11 81 1 71 71 126 98.0 6e-28 MRASLALTRSVNSLLALYDTVLLFQPSDRPVLVRLSPRRGLVIFHFTGLTVLASCRSAVV MVYRCSQAGVATLPDSGPGPH >gi|302034482|gb|GL383153.1| GENE 69 77476 - 78450 981 324 aa, chain + ## HITS:1 COG:Cgl0466 KEGG:ns NR:ns ## COG: Cgl0466 COG0142 # Protein_GI_number: 19551716 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Corynebacterium glutamicum # 8 322 33 348 350 245 44.0 1e-64 MSYSASSEFTDLVSAKLALIEDELGRQAGADTPFVTEAANHIISAGGKRFRPLLVVLCSQ FGDAVNDADLVRAAVVMELTHVASLYHDDVMDEASRRRGAPSANLRWGNSVAIMVGDYLF SKASLAVAELGVDFVKLQARTFSRLVQGQIAETRGPSQGQDPLAHYLKVVADKTGSLIAA SAVFGAMVSHASAENVAALEQFGEDIGEVFQLADDLIDITSTVTGKTPGTDLREKVPTLP TLLLRASDDPADAELKEMLDADLSDDAVLSDVLDKLRPNHVIDEARVEIQRRADRARTHL TPLPDGDAKQALEALCDEVVSRSS >gi|302034482|gb|GL383153.1| GENE 70 78481 - 79263 715 260 aa, chain + ## HITS:1 COG:SMc03194 KEGG:ns NR:ns ## COG: SMc03194 COG2243 # Protein_GI_number: 15966678 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-2 methylase # Organism: Sinorhizobium meliloti # 3 259 2 250 256 191 41.0 9e-49 MSRRLDLIGIGPGNPDWLTLAAVDAIQHLDVLFVVLKEHDVDDLVEFRREVLRRHRPDAD FDGLHIVELQDPPRPWKTAENYKAAVAKWRRQRLDQWTHAVADNLADGERGGFLVWGDPG LFESTLAIVKKLIAAVDADGGVPIELNVIPGISSSLSLASRHQIPLNRQGRALQISPARL LANGMPEGVDDVIVMLDGRQTFSLIDPTDIDIYWAAYIGTPDEILISGDLAEVREEIRSA RADAEKRLGWVFDTYLLRRR >gi|302034482|gb|GL383153.1| GENE 71 79299 - 80219 800 306 aa, chain + ## HITS:1 COG:AGc5061 KEGG:ns NR:ns ## COG: AGc5061 COG2301 # Protein_GI_number: 15890035 # Func_class: G Carbohydrate transport and metabolism # Function: Citrate lyase beta subunit # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 23 305 1 289 294 228 43.0 1e-59 MTGLQPALGAGFGCGTIVGMDSLRPRRSVLFMPGANARALEKARSIDCDGIIIDLEDAVA PDLKVEARERAAGVVKEHPYGYREVAIRVNGMDTQWYHDDLAAAVAAGPDAIAVPKVGSA EHVHAIVADMEAAGADESVKLWAMIETPRAVLDCLDIAEASDRLTVLIMGTNDLTKELRA SHVAGRAPVVTALQMCMLAARAAGTAILDGVYNDVRDVEGFTSQCREAQLMGFDGKTLIH PGQVGPANEVFAPDAEEVAEARGIIDAWENGNGSGVVTYQGRMIENLHVDTARRALAMAE AIEARG >gi|302034482|gb|GL383153.1| GENE 72 80236 - 80667 250 143 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4975 NR:ns ## KEGG: HMPREF0675_4975 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 143 1 143 143 247 100.0 1e-64 MSILVFGWVFCILSHSDPVLFTNAFVIVVVGVLGSYLIHEIGHWLALSVTSPDAEARWES TLLRISLIVRGSSSPRAIAVNAAAGPLACVALGALTLLIGGGLPSEARSTVRVIGWIYVA HAVFLIPPSTDGNTVLASLMHHR >gi|302034482|gb|GL383153.1| GENE 73 80747 - 81058 350 103 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4974 NR:ns ## KEGG: HMPREF0675_4974 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 103 1 103 103 154 100.0 9e-37 MKNPKVYLTSLIITIIATLALATGTILILMFSVHDNESAHLTGLFGSVYFQSSVEHSHNT VKATMGVASLPRLGAVAAVIFAFTLLVSFIVIKLKTYRESLLH >gi|302034482|gb|GL383153.1| GENE 74 81055 - 82449 696 464 aa, chain - ## HITS:1 COG:no KEGG:PPA1916 NR:ns ## KEGG: PPA1916 # Name: not_defined # Def: ABC transporter permease # Organism: P.acnes # Pathway: not_defined # 1 464 40 503 503 749 99.0 0 MTIMRFMGAYLVRVVVGKGVLKSRAARLGAFACVMLFLLTATILAVILTHDGAGEATTRD LVLTVSSLSSVVWTAAAFLIVKVLMADAGTMMAITHHLPITNRERQRAVGVLDGATTLLI VIIGMFATSVSTLVNFGISAIPGLTMCVVMPATATYTVLEMSHRCCDLALARTPLGPARQ PILAVVLFFVVLALWRSMPTMLAAITSTPEPFTVWSLVFHDIGLHYGAPAVIGCFVVLLV LSLLPVMVLPTSPLDVRHRFVMFPLAGISNRFRNAAPQFQALFRSRYSLQAAVLSAGFVI LLATRIASPSSVWGAEPMTIGGFFQFATLAPTFRTFEPRLPASRFYLRMLAAQYALVSPM LVVAVLIDVFTGHPAHSTALAVAGVCGSALITIAVGIFIPARDDNPLSILLGCAIMLAIG TVLVVFCGILHLPATASIGLGIVSAVLLITHSIITISDQRKAAR >gi|302034482|gb|GL383153.1| GENE 75 82430 - 82591 61 53 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKRMMVMVRERFSRRRVRGAGVTVIRPCVGEVFPALATQMVSVSVIPAPYTQR >gi|302034482|gb|GL383153.1| GENE 76 82563 - 83384 468 273 aa, chain - ## HITS:1 COG:Cgl1972 KEGG:ns NR:ns ## COG: Cgl1972 COG1131 # Protein_GI_number: 19553222 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Corynebacterium glutamicum # 36 271 23 255 285 101 30.0 2e-21 MRPSDDADRLPSPRGGPVLASTSKFEGPFSCHEPVIEIKDLDFYYSDKPVLNNVTLAITQ GSCLALIGPNGSGKSTLCKILQGILAAPKTATTNVLGYPCGSRIACRAISYCADNDHLPQ FLTGAEFISYTLSLRSPSVLGKPRLRGATADIFERLGMAGRHDDLMESYSHGMLKKTQIA AALLAHSPVIIIDESLNGIDIEAQMTIEDALFNHIRQGGTQIICSHDFAMLDRCATHVAM LDYGNMVEFSAVDQLRARHATIRDLIVGYMGLG >gi|302034482|gb|GL383153.1| GENE 77 83384 - 83626 321 80 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4971 NR:ns ## KEGG: HMPREF0675_4971 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 80 1 80 80 150 100.0 2e-35 MPESQAFALQSTTEILKNKFDCALLRHDAWWLVFIAVLIGLGATLLAGMAIWCVVNQHGK FTGHWKWVKYGISISMECAR >gi|302034482|gb|GL383153.1| GENE 78 83792 - 84721 441 309 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4970 NR:ns ## KEGG: HMPREF0675_4970 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 309 1 309 309 610 100.0 1e-173 MFTVDVVKIVGLSLLRHSVRNVSFQRFLVGIAAILLLLPTACFRQDDAQAPVVDNLGTVF SPSNSLIREPTNSSATGTLKSTYEYLRLIDGHDLPDDDGYAHDHLVAALRPYLVNGGDSR QAHVNQLMAASSLKTLNALSDKERSEVDKRTRLPKGCITRKTVMTDLPIATMRREIGLSN DGLCLTPWKVKTTSSEEARWAMQALASADLFSNAKDAEKWGWESISDGYLRHLETYSGPS TTIAMALSAANTVSTLSRSQLQRIGDSLADAPCPRKDLGPALIRNGKPVKDKCSIESAYL LRYSGNWAW >gi|302034482|gb|GL383153.1| GENE 79 84723 - 85343 185 206 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 8 190 10 194 311 75 28 7e-13 MTVSWQGVTKTFPSGDSARGGCTIHCADATVDAGQACLIKGASGQGKSTMMAMIGGLLPV TSGHITIAHGHGDRDPEQARREGLVAYAFQYPFLTPYFTVWENVALCAEAEIAYQLLASC GMADLANQQASTLSGGQQQRVAVVRAVASRPAVLLADEPTASLDDDNRWAVEKLLQDYLD DGGTIIMASHQPIDLPHLSVTVEATR >gi|302034482|gb|GL383153.1| GENE 80 85340 - 86563 712 407 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4968 NR:ns ## KEGG: HMPREF0675_4968 # Name: not_defined # Def: efflux ABC transporter, permease protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 407 1 407 407 780 99.0 0 MSMSASRHAWVSLRRSSLPRQRWFIIVLALLGGCALAMNTIVAGHVRDQIDAADAGKRLN YVVVDSTGRGSSGPINAAARRQMMGMDHVAKVYEWSQAGLLCDDDNGLPQIVWATAQIPD VPPAAVAFDGPTRPVRPGEVIVPDAVNGHDLKALLGTTINVSYQRKTKASEAEAVPTKLK VVGLYDSSRPNNDGPDTVYVNVDDAKNWEAANAGMSPQAFDKQGVSRAYVEADSRAHVAD VHRQLSQAGFSATSQADVVGYADQMTSDVQRMQTILIVVICVAALVLGVSVGSTISRQRG SQIAVFKAFGRSGEWILGCLEMEALFIGVVMALGIVIVGLVLCGVAMALTAVGVNLGPVA MSPVPLADVLEQGAWFPLVLLAAVPLGCLPRTIVSVKTHKPYELLRE >gi|302034482|gb|GL383153.1| GENE 81 86631 - 88613 1374 660 aa, chain - ## HITS:1 COG:ML2613 KEGG:ns NR:ns ## COG: ML2613 COG3590 # Protein_GI_number: 15828409 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted metalloendopeptidase # Organism: Mycobacterium leprae # 9 660 16 666 667 580 47.0 1e-165 MTASFQDRDPDVRPADDLFRHVNGSWLSTTTIPNDQASTGSFRVLRDNSEAAVHDILEEL TSGYAHELRQAASASTDHEVNLMAELYRRFMDSAAVEAVGTIPLTPILARIDRVTTISEF MTLLGQHYRESLGALFYLAEESDPADPTRYVPWMGQAGLGLPDEAYYRDDDKAEVREAYV SHVTRMLTLAGLDNAADQAQAVMDLETEIASHHWDQVHCRDMKAAFNPKTFDDLASTHPG LHLEQWRQGARIPVEVLATVIDNQPSFFDGVEGMLVDERLDQWKSWARWHAISSLASYLS SAFVDENFDFYGRVLNGTPALKARWKRGVSFVESAMGEAVGKLYVARHFPPAAKERMDNL VANLLAAYRQSISTLTWMSESTRAEALDKLSAFRPKIGYPEHWRDFSGLRLPDGSLVDAV LACNSFQLDRTIEKLSGPMDPDEWLMFPQTVNAYYHPLRNEIVFPAAILQPPFFDVEADD AVNYGRIGAVIGHEIGHGFDDQGSTCDGAGRLRDWWTAEDRTAFEERTKGLISQYDALVP LQLQPDGPHVNGSLTIGENIGDLGGAGIAFKALQISFAGTEPEPIDDVPWQQRFFLSYAR IWREKQRDEALRTQIATDPHSPTEFRCNQIVRNIDAFHEAFGVTEDDPMWLAPEKRVTIW >gi|302034482|gb|GL383153.1| GENE 82 89270 - 89866 401 198 aa, chain - ## HITS:1 COG:no KEGG:PPA1908 NR:ns ## KEGG: PPA1908 # Name: not_defined # Def: protein associated to putative adhesion protein # Organism: P.acnes # Pathway: not_defined # 1 198 1 198 198 345 99.0 9e-94 MIFYTATKEAATTTHKNTVEEQYRHAPLNGLIIGAIVGAVWALVVLGYLISLLLTEQDTE LCPPELVMSPIFPVAGWLTGLWQRTAVDCDDITKQKRRVKAITAVMSSLAGVLMGSIERF LTTLRFINGKETLIYYLILLAVFSLIGWILGTVDITLKENGSHFLIKMGAATAIALFTSV AVSFYVFNAMQIIFFFEV >gi|302034482|gb|GL383153.1| GENE 83 89884 - 90342 95 152 aa, chain - ## HITS:1 COG:no KEGG:PPA1907 NR:ns ## KEGG: PPA1907 # Name: not_defined # Def: protein associated to putative adhesion protein # Organism: P.acnes # Pathway: not_defined # 1 133 56 188 191 253 100.0 2e-66 MLPILGWITGAWERSFTSRGDPAKIEHGIKVIGAAMMTAVGIMTAATFYTLVASQDTLHV PARAAYSTKAFILYLLPLMMFPCAGWALGGARVNNIHDTRWIISKMSIMAGVMLFLSVTF WFTTSLFIEALFFRVLSVFPNNARPCNNPRRP Prediction of potential genes in microbial genomes Time: Wed Jul 20 19:26:25 2011 Seq name: gi|302034481|gb|GL383154.1| Propionibacterium acnes HL005PA4 genomic scaffold Scfld2, whole genome shotgun sequence Length of sequence - 9791 bp Number of predicted genes - 7, with homology - 6 Number of transcription units - 7, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 145 - 1644 958 ## COG1113 Gamma-aminobutyrate permease and related permeases - Term 2393 - 2438 -0.8 2 2 Tu 1 . - CDS 2594 - 2725 130 ## 3 3 Tu 1 . + CDS 3006 - 4160 856 ## COG1376 Uncharacterized protein conserved in bacteria + Term 4185 - 4223 6.1 4 4 Tu 1 . + CDS 4431 - 5630 771 ## COG0797 Lipoproteins 5 5 Tu 1 . + CDS 5925 - 7211 1264 ## COG0372 Citrate synthase 6 6 Tu 1 . + CDS 7450 - 8475 695 ## COG1816 Adenosine deaminase - Term 8341 - 8387 2.1 7 7 Tu 1 . - CDS 8522 - 9634 553 ## COG0686 Alanine dehydrogenase Predicted protein(s) >gi|302034481|gb|GL383154.1| GENE 1 145 - 1644 958 499 aa, chain + ## HITS:1 COG:ECs5186 KEGG:ns NR:ns ## COG: ECs5186 COG1113 # Protein_GI_number: 15834440 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Escherichia coli O157:H7 # 15 475 12 469 470 499 55.0 1e-141 MSHMDSATQATTPTEGPTEEPQLQRGLKNRHLQLIAIGGAIGTGLFLGSGKTISLAGPSI LLVYLIIGAVLFFVMRAMGELLLSNLAYKSFADFATDLVGPGAGFYMGWTYWMCWVVIGN ADTIAMCGYLAAWFPHLDKWIPATCIVLLLTCLNMVAVKLFGEMEFWFAMIKIVTIIALI LVGGYLAITGFQPPRSGVPAASFSHLWDRGGFFPTGFMGFIAGFQIAIFSFQGIEMAGTA AAETADPEHNLPKAINSIPARVLIFYVLTLGVIMAVQPWDLINPQASPFVEMFSFIGILI AFHIVNFVVLTSAASSANSGVFSTSRILYGLAREKDAPPVFAKLSSRHIPRNALILTAMC IAPAIVLVTLEDSVMDAFSLVAGVSSVLYLSVWGLILVCYLKYLGKHPQRHAESAFKMPA GRVMSWVGILFFITILIMLGFSADSRQALIAAPVWVIFMMVLYRLLASTRADHTRIDFDA ERIRALEELHRTQEDEHQA >gi|302034481|gb|GL383154.1| GENE 2 2594 - 2725 130 43 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRDDSDEQLAVRKRPDWLTWLIVVVVTIIGVTIIALWWYCLLN >gi|302034481|gb|GL383154.1| GENE 3 3006 - 4160 856 384 aa, chain + ## HITS:1 COG:Cgl2423 KEGG:ns NR:ns ## COG: Cgl2423 COG1376 # Protein_GI_number: 19553673 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 37 383 57 397 403 169 32.0 6e-42 MTAAACAKTSVGNGFGSSGNSATPTPTPTPTPATLTIAADHPITELQPGDALKFAVANGT LKDVKVTDSEGSEVTGTLKDAVWTPSKPWSLKTSYTVAATLSNTDPHAGSTTTVTKNIKS IDGAVNVVEMLYSDASVGIGMPVIIKFGHEVIDADMRARIQKAMHIDVSPQQEGAWGWID HSQLMWRPKDFWKAGTKVNVSGNLTGLPTSSHRWITHDVKGSFQVGQARIVKIYINKHKM DVLQDGNVVRTIPVTTGKPGASTTTRSGTKVIIERDATRIMDSSTVGIPKGSSDYYHLKV KYAMRVTYTGEFIHAAPWSERSQGSANVSHGCVGLSTENARWLFNFCAAGDPVINSGSNR MFKPDEGIGCWCYDWSGWQKLSAV >gi|302034481|gb|GL383154.1| GENE 4 4431 - 5630 771 399 aa, chain + ## HITS:1 COG:alr2935 KEGG:ns NR:ns ## COG: alr2935 COG0797 # Protein_GI_number: 17230427 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipoproteins # Organism: Nostoc sp. PCC 7120 # 288 399 250 370 371 96 47.0 9e-20 MIRPKRSVRGAAATIALTSGISVVAPAVIGSVAHAANTQTMYTTADVNVRSASSNSGRVL TVAARGQSVKVTGEKVRGWVPVAVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTMIAAVP VNVRSDSANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYGRYLTTGKAAAAPA KPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVINQLASGAGVQVTGEV HGNWVQIRANGYTGWAYRTHLTGNVPATKVDTPSRNTHRGSDTSRDKARPPRQDSSNDDS VKGSGRIAGRCIASFYDEPQTTASGEQFNPNAMTAANKTLPLGTRIRVTNVRNGRSTVVR INDRGPYVAGRCVDLSRASFARIADIGQGTAPITYTILG >gi|302034481|gb|GL383154.1| GENE 5 5925 - 7211 1264 428 aa, chain + ## HITS:1 COG:MT0920 KEGG:ns NR:ns ## COG: MT0920 COG0372 # Protein_GI_number: 15840315 # Func_class: C Energy production and conversion # Function: Citrate synthase # Organism: Mycobacterium tuberculosis CDC1551 # 14 427 17 431 431 527 60.0 1e-149 MGSSARFVDEDTHLDFSKVVATDGQVGYDVAGLLNKTGNVMIDPGFVNTASCESQITYID GEQGVLRYRGYPIEQLAEQSTFLETAYLVLYGELPSKAQLDGFEERIRRTTLIDERMRDL FRCFPRRSHPMPVLAAGIMALSTFSQKSSGTDPDQIEAATTRLIAKVPTLAAFGYKNSMG QPTLYPDNSLSYVQNFIRMSFGFPTEPYEFNDEITRALETLLILHVDHEQNCSTSTVRMV ASSGANMYAAVAAGVNALSGPKHGGANQAVLEMLQFIRDSGMTTKEFVRKVKDKESDIKL MGFGHRIYKNYDPRAAIIKKHADRIMELHTGREDLLEIAKELEETALNDDYFKERKLYPN VDFYTGLIYEAMGFPMNMFTVLFALGRLPGWIAQYREQVASGGNKIWRPRQIFTGSDKRD YVPLNKRA >gi|302034481|gb|GL383154.1| GENE 6 7450 - 8475 695 341 aa, chain + ## HITS:1 COG:ML0700 KEGG:ns NR:ns ## COG: ML0700 COG1816 # Protein_GI_number: 15827296 # Func_class: F Nucleotide transport and metabolism # Function: Adenosine deaminase # Organism: Mycobacterium leprae # 10 337 14 349 362 248 42.0 2e-65 MDSAEAMNLPKVVLHDHLDGGLRPATVLELAAQRGRPVPAQTPEDLATWFFESADSGSLA RYLDAFTETIALMQDADSLRRVAREFVVDMATDGVIYAEARWAPQQHLTGGLSAAEAVEA VQVGLVDGMESASLSGTTIIARQILCLMRHLDVPEDVVDLAVNHAPGVVGVDVAGPEDGF PLAPFTNALTRVQAAGIHLTVHAGEAAGPESILDALNHGAERLGHGVRIIEDRDESGWGP TAQQVLSNQVPLEVCPTSNTQTGICRKVAEHPLSTLWSTGFNITVSCDNRLMSRTTTSRE ISLVSQALCWNRDDALAAQRNALQAAFCSQDDKQSLVPLLV >gi|302034481|gb|GL383154.1| GENE 7 8522 - 9634 553 370 aa, chain - ## HITS:1 COG:Rv2780 KEGG:ns NR:ns ## COG: Rv2780 COG0686 # Protein_GI_number: 15609917 # Func_class: E Amino acid transport and metabolism # Function: Alanine dehydrogenase # Organism: Mycobacterium tuberculosis H37Rv # 1 370 1 370 371 410 60.0 1e-114 MRVGVPTEVKNSEFRVAVTPAGVHALVGRGHEVLVQAGAGVGSGIPDSDFVGAGARVVGD VESVWGDADLVLKVKEPVAEEYGRLHEGLVLFTYLHLAADEALTRELLGRGVTSIAYETV ELADHSLPLLSPMSEIAGRLAAQVGANCLLQSAGGRGVLFGGGSGVRRGRVSVLGGGVAG LCAARVAAGMGADVTVFDVDVGRMRYIDEVWGGRIGTRFSSPLAVREACGESDVVIGSVL VPGARTPHLVDHEMVLGMVPGSVLVDVAVDQGGCFEDSHPTTHADPTFVVGGSVFYCVAN MPGAVPHTSTYALTNATMRYVLLLADEGWRGACGSRDDLRRGLATCGGKLVSAPVGEALG IECVPVSEVL Prediction of potential genes in microbial genomes Time: Wed Jul 20 19:26:31 2011 Seq name: gi|302034480|gb|GL383155.1| Propionibacterium acnes HL005PA4 genomic scaffold Scfld3, whole genome shotgun sequence Length of sequence - 1441 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + LSU_RRNA 1 - 1138 99.0 # AE017283 [R:1520562..1523454] # 23SrRNA # Propionibacterium acnes KPA171202 # Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Propionibacterineae; Propionibacteriaceae; Propionibacterium. + 5S_RRNA 1256 - 1377 100.0 # AE017283 [D:611077..611198] # 5SrRNA # Propionibacterium acnes KPA171202 # Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Propionibacterineae; Propionibacteriaceae; Propionibacterium. Prediction of potential genes in microbial genomes Time: Wed Jul 20 19:27:31 2011 Seq name: gi|302034479|gb|GL383156.1| Propionibacterium acnes HL005PA4 genomic scaffold Scfld4, whole genome shotgun sequence Length of sequence - 182659 bp Number of predicted genes - 193, with homology - 185 Number of transcription units - 113, operones - 40 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 42 - 1073 990 ## COG0797 Lipoproteins - Prom 1113 - 1172 4.2 2 2 Op 1 . + CDS 1387 - 2634 985 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 3 2 Op 2 . + CDS 2714 - 3427 604 ## HMPREF0675_5237 hypothetical protein 4 2 Op 3 . + CDS 3430 - 4164 395 ## COG0846 NAD-dependent protein deacetylases, SIR2 family + Term 4327 - 4355 -0.0 5 3 Tu 1 . - CDS 4618 - 4956 226 ## HMPREF0675_5235 hypothetical protein - Term 4985 - 5031 -0.8 6 4 Op 1 6/0.000 - CDS 5133 - 6668 1251 ## COG2986 Histidine ammonia-lyase 7 4 Op 2 . - CDS 6804 - 7994 710 ## COG1228 Imidazolonepropionase and related amidohydrolases 8 4 Op 3 . - CDS 7991 - 9331 722 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases 9 4 Op 4 . - CDS 9328 - 10524 709 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 10 4 Op 5 . - CDS 10524 - 12530 2031 ## COG2987 Urocanate hydratase + Prom 12576 - 12635 1.7 11 5 Tu 1 . + CDS 12770 - 14659 1116 ## COG1472 Beta-glucosidase-related glycosidases + Term 14761 - 14807 1.9 12 6 Tu 1 . - CDS 14672 - 14914 104 ## COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 13 7 Op 1 . - CDS 15114 - 15353 286 ## PROTEIN SUPPORTED gi|50843599|ref|YP_056826.1| 50S ribosomal protein L32 14 7 Op 2 3/0.000 - CDS 15289 - 15594 508 ## PROTEIN SUPPORTED gi|50843598|ref|YP_056825.1| 30S ribosomal protein S14 15 7 Op 3 16/0.000 - CDS 15594 - 15764 286 ## PROTEIN SUPPORTED gi|50843597|ref|YP_056824.1| 50S ribosomal protein L33 16 7 Op 4 . - CDS 15764 - 16000 412 ## PROTEIN SUPPORTED gi|50843596|ref|YP_056823.1| 50S ribosomal protein L28 - Prom 16031 - 16090 3.4 + Prom 15995 - 16054 3.0 17 8 Tu 1 . + CDS 16097 - 16342 429 ## PROTEIN SUPPORTED gi|50843595|ref|YP_056822.1| 50S ribosomal protein L31 type B + Term 16506 - 16555 10.0 18 9 Op 1 44/0.000 - CDS 16570 - 17631 909 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 19 9 Op 2 44/0.000 - CDS 17621 - 18658 551 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 20 9 Op 3 49/0.000 - CDS 18668 - 19639 730 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 21 9 Op 4 21/0.000 - CDS 19632 - 20555 880 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 22 9 Op 5 . - CDS 20628 - 22295 1840 ## COG4166 ABC-type oligopeptide transport system, periplasmic component - Prom 22419 - 22478 4.9 - Term 22534 - 22573 7.3 23 10 Tu 1 . - CDS 22595 - 23134 538 ## COG0693 Putative intracellular protease/amidase - Prom 23261 - 23320 1.7 - TRNA 23346 - 23422 90.8 # Pro CGG 0 0 24 11 Op 1 2/0.000 - CDS 23502 - 24404 693 ## COG1408 Predicted phosphohydrolases 25 11 Op 2 . - CDS 24418 - 26940 2120 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) 26 11 Op 3 . - CDS 27037 - 27234 93 ## 27 12 Op 1 . + CDS 27128 - 28402 1250 ## COG0527 Aspartokinases 28 12 Op 2 . + CDS 28410 - 30236 1283 ## COG0728 Uncharacterized membrane protein, putative virulence factor 29 13 Tu 1 . - CDS 30271 - 31827 956 ## COG0726 Predicted xylanase/chitin deacetylase - Term 31854 - 31882 -0.2 30 14 Op 1 . - CDS 31984 - 32907 775 ## COG0701 Predicted permeases 31 14 Op 2 . - CDS 32904 - 33764 551 ## HMPREF0675_5208 hypothetical protein 32 14 Op 3 . - CDS 33761 - 35254 1063 ## COG0726 Predicted xylanase/chitin deacetylase - Prom 35364 - 35423 1.5 - Term 35368 - 35419 11.3 33 15 Tu 1 . - CDS 35444 - 36145 773 ## COG2267 Lysophospholipase 34 16 Tu 1 . + CDS 36092 - 36265 79 ## gi|313802968|gb|EFS44179.1| conserved domain protein 35 17 Tu 1 . - CDS 36395 - 36565 248 ## PPA2142 putative lysophospholipase - Term 36738 - 36774 9.0 36 18 Tu 1 . - CDS 36844 - 37416 698 ## HMPREF0675_5204 hypothetical protein 37 19 Op 1 . + CDS 37656 - 37859 86 ## - TRNA 37714 - 37799 62.8 # Leu CAG 0 0 38 19 Op 2 . + CDS 37939 - 38637 456 ## PPA2140 hypothetical protein 39 20 Tu 1 . - CDS 38643 - 39644 846 ## HMPREF0675_5201 cutinase - Term 39849 - 39893 2.1 40 21 Tu 1 . - CDS 39940 - 40401 544 ## COG1881 Phospholipid-binding protein 41 22 Op 1 12/0.000 + CDS 40857 - 43199 2078 ## COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase 42 22 Op 2 . + CDS 43460 - 43711 138 ## COG0602 Organic radical activating enzymes 43 23 Tu 1 . - CDS 43726 - 46317 2113 ## COG4581 Superfamily II RNA helicase 44 24 Op 1 . - CDS 46473 - 47003 525 ## COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) 45 24 Op 2 . - CDS 46988 - 47251 130 ## gi|315079328|gb|EFT51329.1| hypothetical protein HMPREF9565_00447 46 25 Tu 1 . + CDS 47172 - 47837 696 ## HMPREF0675_5194 hypothetical protein + Term 47860 - 47888 -0.1 47 26 Tu 1 . - CDS 47879 - 49057 596 ## HMPREF0675_5193 hypothetical protein 48 27 Tu 1 . + CDS 49044 - 50726 1530 ## COG0166 Glucose-6-phosphate isomerase + Term 50919 - 50958 -0.4 + Prom 51052 - 51111 2.7 49 28 Tu 1 . + CDS 51276 - 51896 413 ## COG2949 Uncharacterized membrane protein - Term 51892 - 51939 12.1 50 29 Tu 1 . - CDS 51963 - 52784 839 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase 51 30 Tu 1 . + CDS 52919 - 54589 1608 ## COG0018 Arginyl-tRNA synthetase + Term 54752 - 54796 9.1 52 31 Tu 1 . - CDS 55118 - 56143 719 ## HMPREF0675_5187 hypothetical protein - Prom 56334 - 56393 3.0 + Prom 57078 - 57137 1.7 53 32 Tu 1 . + CDS 57157 - 57279 204 ## PROTEIN SUPPORTED gi|213961087|ref|ZP_03389367.1| ribosomal protein L36 - Term 57180 - 57211 0.6 54 33 Tu 1 . - CDS 57330 - 57941 538 ## HMPREF0675_5183 hypothetical protein 55 34 Tu 1 . - CDS 58115 - 59044 757 ## COG1940 Transcriptional regulator/sugar kinase - Term 59245 - 59293 1.1 56 35 Tu 1 . - CDS 59357 - 59569 57 ## PPA2123 hypothetical protein - Term 59839 - 59892 17.0 57 36 Op 1 24/0.000 - CDS 59967 - 60953 1130 ## COG0208 Ribonucleotide reductase, beta subunit 58 36 Op 2 . - CDS 60988 - 63558 1985 ## COG0209 Ribonucleotide reductase, alpha subunit 59 36 Op 3 . - CDS 63515 - 63706 97 ## - Prom 63859 - 63918 2.9 60 37 Op 1 21/0.000 - CDS 64008 - 64499 455 ## COG0477 Permeases of the major facilitator superfamily 61 37 Op 2 . - CDS 64352 - 65227 460 ## COG0477 Permeases of the major facilitator superfamily 62 37 Op 3 . - CDS 65234 - 65443 84 ## PPA2119 hypothetical protein 63 37 Op 4 . - CDS 65534 - 66634 753 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family 64 37 Op 5 . - CDS 66687 - 67076 403 ## HMPREF0675_5173 hypothetical protein - Prom 67104 - 67163 2.5 65 38 Tu 1 . - CDS 67179 - 68372 676 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 66 39 Tu 1 . + CDS 68506 - 69105 398 ## COG1443 Isopentenyldiphosphate isomerase 67 40 Op 1 . - CDS 69112 - 69663 224 ## COG1446 Asparaginase 68 40 Op 2 . - CDS 69564 - 70076 262 ## COG1446 Asparaginase 69 41 Op 1 40/0.000 - CDS 70178 - 71548 808 ## COG0642 Signal transduction histidine kinase 70 41 Op 2 . - CDS 71605 - 72303 652 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 71 41 Op 3 . - CDS 72300 - 73394 895 ## HMPREF0675_5165 hypothetical protein 72 41 Op 4 . - CDS 73458 - 73949 384 ## COG0394 Protein-tyrosine-phosphatase + Prom 74067 - 74126 2.6 73 42 Tu 1 . + CDS 74191 - 74484 181 ## PPA2109 hypothetical protein - Term 74567 - 74614 7.2 74 43 Tu 1 . - CDS 74641 - 75456 877 ## HMPREF0675_5162 CAMP factor (Cfa) 75 44 Tu 1 . + CDS 75726 - 76163 301 ## HMPREF0675_5161 hypothetical protein 76 45 Tu 1 . + CDS 76402 - 76659 132 ## + Term 76818 - 76844 1.0 - Term 76436 - 76480 12.0 77 46 Tu 1 . - CDS 76531 - 78033 1130 ## HMPREF0675_5160 cellulase (glycosyl hydrolase family 5) - Prom 78204 - 78263 4.4 78 47 Tu 1 . + CDS 78627 - 79646 720 ## COG1075 Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold 79 48 Op 1 . - CDS 79824 - 80132 206 ## COG2801 Transposase and inactivated derivatives 80 48 Op 2 . - CDS 80181 - 80543 279 ## COG0346 Lactoylglutathione lyase and related lyases 81 49 Tu 1 . - CDS 81007 - 81195 73 ## gi|327448553|gb|EGE95207.1| hypothetical protein HMPREF9570_00111 82 50 Tu 1 . + CDS 81383 - 81586 233 ## HMPREF0675_5155 hypothetical protein 83 51 Tu 1 . - CDS 81633 - 81845 58 ## gi|313763741|gb|EFS35105.1| hypothetical protein HMPREF9567_01930 84 52 Tu 1 . + CDS 81863 - 82138 155 ## HMPREF0675_5153 hypothetical protein + Term 82150 - 82192 -0.5 85 53 Tu 1 . + CDS 82385 - 82630 179 ## COG1132 ABC-type multidrug transport system, ATPase and permease components + Term 82785 - 82823 2.0 - Term 82771 - 82811 7.4 86 54 Op 1 . - CDS 82844 - 83179 303 ## PPA2097 5'-nucleotidase/2',3'-cyclic phosphodiesterase or related esterase 87 54 Op 2 . - CDS 83191 - 83628 372 ## COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases 88 54 Op 3 . - CDS 83502 - 83837 184 ## HMPREF0675_5150 hypothetical protein 89 54 Op 4 . - CDS 83871 - 84953 1071 ## COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases - Prom 85002 - 85061 1.5 90 55 Op 1 . - CDS 85223 - 86503 960 ## COG0535 Predicted Fe-S oxidoreductases 91 55 Op 2 . - CDS 86503 - 87873 651 ## COG1232 Protoporphyrinogen oxidase + Prom 87977 - 88036 1.9 92 56 Op 1 28/0.000 + CDS 88062 - 89207 815 ## COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit 93 56 Op 2 24/0.000 + CDS 89207 - 90211 752 ## COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit 94 56 Op 3 . + CDS 90244 - 91653 989 ## COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes 95 57 Tu 1 . - CDS 91694 - 91912 61 ## gi|315109556|gb|EFT81532.1| hypothetical protein HMPREF9602_02338 - Prom 92157 - 92216 2.9 + Prom 91772 - 91831 2.5 96 58 Op 1 . + CDS 91899 - 92276 225 ## HMPREF0675_5142 hypothetical protein 97 58 Op 2 . + CDS 92277 - 93011 270 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 98 58 Op 3 . + CDS 93011 - 94363 682 ## HMPREF0675_5140 hypothetical protein 99 58 Op 4 . + CDS 94360 - 95064 266 ## HMPREF0675_5139 hypothetical protein 100 58 Op 5 . + CDS 95143 - 96414 769 ## COG2966 Uncharacterized conserved protein 101 59 Tu 1 . - CDS 96445 - 97128 621 ## HMPREF0675_5136 hypothetical protein - Prom 97349 - 97408 4.9 + Prom 97301 - 97360 6.0 102 60 Op 1 . + CDS 97438 - 97626 168 ## gi|332676463|gb|AEE73279.1| hypothetical protein PAZ_c21560 103 60 Op 2 35/0.000 + CDS 97623 - 98549 961 ## COG1132 ABC-type multidrug transport system, ATPase and permease components 104 60 Op 3 35/0.000 + CDS 98595 - 99443 222 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 105 60 Op 4 . + CDS 99440 - 101233 186 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 106 60 Op 5 . + CDS 101230 - 101874 560 ## HMPREF0675_5132 transcriptional regulator, TetR family + Term 102119 - 102191 31.4 107 61 Tu 1 . - CDS 102186 - 102662 586 ## COG0662 Mannose-6-phosphate isomerase 108 62 Tu 1 . + CDS 102871 - 103032 73 ## HMPREF0675_5130 hypothetical protein + Term 103185 - 103235 -0.6 109 63 Tu 1 . - CDS 103029 - 103445 368 ## HMPREF0675_5129 hypothetical protein 110 64 Tu 1 . - CDS 103570 - 103785 80 ## HMPREF0675_5128 hypothetical protein 111 65 Tu 1 . + CDS 103744 - 104862 680 ## COG1957 Inosine-uridine nucleoside N-ribohydrolase 112 66 Tu 1 . - CDS 105113 - 105277 151 ## HMPREF0675_5126 hypothetical protein + Prom 105095 - 105154 2.7 113 67 Op 1 . + CDS 105307 - 105534 184 ## HMPREF0675_5125 hypothetical protein 114 67 Op 2 . + CDS 105531 - 105920 300 ## COG4113 Predicted nucleic acid-binding protein, contains PIN domain 115 68 Tu 1 . + CDS 106031 - 106285 117 ## PPA2072 hypothetical protein - TRNA 106223 - 106296 86.8 # Gly CCC 0 0 116 69 Op 1 . - CDS 106358 - 106969 255 ## HMPREF0675_5121 hypothetical protein 117 69 Op 2 . - CDS 107039 - 107239 127 ## + Prom 107028 - 107087 4.3 118 70 Op 1 . + CDS 107144 - 107530 297 ## PPA2054 amidase 119 70 Op 2 . + CDS 107582 - 107899 177 ## COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases + Term 108038 - 108073 1.6 120 71 Tu 1 . + CDS 108137 - 108544 198 ## COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases + Term 108585 - 108618 1.1 - Term 108687 - 108731 14.4 121 72 Op 1 . - CDS 108759 - 110273 1556 ## COG0427 Acetyl-CoA hydrolase 122 72 Op 2 . - CDS 110551 - 111345 414 ## COG0676 Uncharacterized enzymes related to aldose 1-epimerase 123 72 Op 3 . - CDS 111363 - 112220 784 ## COG0560 Phosphoserine phosphatase 124 72 Op 4 . - CDS 112300 - 113304 681 ## COG2813 16S RNA G1207 methylase RsmC - Prom 113366 - 113425 1.7 125 73 Op 1 . + CDS 113138 - 113449 98 ## 126 73 Op 2 1/0.038 + CDS 113481 - 114365 826 ## COG1806 Uncharacterized protein conserved in bacteria + Term 114401 - 114435 -0.1 127 74 Tu 1 . + CDS 114704 - 117355 2675 ## COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase + Prom 117442 - 117501 2.5 128 75 Tu 1 . + CDS 117528 - 118703 792 ## HMPREF0675_5112 FHA domain protein 129 76 Tu 1 . + CDS 118850 - 119578 671 ## HMPREF0675_5111 hypothetical protein - Term 119326 - 119378 4.0 130 77 Tu 1 . - CDS 119602 - 120276 567 ## COG0274 Deoxyribose-phosphate aldolase - Prom 120415 - 120474 2.9 + Prom 120425 - 120484 2.8 131 78 Tu 1 . + CDS 120637 - 120864 169 ## 132 79 Tu 1 . - CDS 121016 - 121747 748 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 133 80 Tu 1 . + CDS 121741 - 121866 69 ## gi|313771713|gb|EFS37679.1| hypothetical protein HMPREF9574_01917 + Term 121928 - 121967 3.0 134 81 Op 1 . + CDS 122171 - 123316 1036 ## COG0306 Phosphate/sulphate permeases 135 81 Op 2 . + CDS 123313 - 123546 298 ## HMPREF0675_5106 hypothetical protein + Term 123563 - 123598 8.1 + Prom 123690 - 123749 1.9 136 82 Op 1 29/0.000 + CDS 123806 - 125659 2027 ## COG0443 Molecular chaperone 137 82 Op 2 5/0.000 + CDS 125744 - 126409 686 ## COG0576 Molecular chaperone GrpE (heat shock protein) 138 82 Op 3 4/0.000 + CDS 126483 - 127625 753 ## COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain 139 82 Op 4 . + CDS 127627 - 128088 378 ## COG0789 Predicted transcriptional regulators 140 83 Tu 1 . + CDS 128192 - 129100 651 ## HMPREF0675_5101 GDSL-like protein 141 84 Op 1 . + CDS 129204 - 130247 942 ## COG1062 Zn-dependent alcohol dehydrogenases, class III 142 84 Op 2 . + CDS 130315 - 132024 1294 ## COG2985 Predicted permease 143 85 Tu 1 . - CDS 132067 - 133425 1379 ## COG1113 Gamma-aminobutyrate permease and related permeases 144 86 Tu 1 . + CDS 133581 - 133961 389 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 145 87 Op 1 36/0.000 - CDS 133997 - 136420 1930 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 146 87 Op 2 . - CDS 136417 - 137151 276 ## PROTEIN SUPPORTED gi|225084369|ref|YP_002657150.1| ribosomal protein S16 147 88 Op 1 19/0.000 - CDS 137296 - 137970 694 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 148 88 Op 2 . - CDS 138001 - 139200 794 ## COG4585 Signal transduction histidine kinase 149 89 Op 1 . + CDS 139437 - 140624 894 ## COG1914 Mn2+ and Fe2+ transporters of the NRAMP family 150 89 Op 2 . + CDS 140660 - 141190 332 ## COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 151 89 Op 3 . + CDS 141256 - 142164 964 ## COG3588 Fructose-1,6-bisphosphate aldolase + Term 142177 - 142216 6.3 - Term 142015 - 142056 -0.6 152 90 Tu 1 . - CDS 142143 - 142367 148 ## gi|313771690|gb|EFS37656.1| hypothetical protein HMPREF9574_01894 153 91 Tu 1 . + CDS 142318 - 142992 618 ## COG0561 Predicted hydrolases of the HAD superfamily 154 92 Tu 1 . - CDS 142999 - 144357 1183 ## COG1114 Branched-chain amino acid permeases 155 93 Op 1 3/0.000 + CDS 144635 - 147220 1779 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 + Term 147257 - 147310 9.1 156 93 Op 2 . + CDS 147371 - 148798 1036 ## COG0477 Permeases of the major facilitator superfamily 157 93 Op 3 . + CDS 148701 - 148883 189 ## HMPREF0675_5085 transporter, major facilitator family protein 158 94 Op 1 . - CDS 148837 - 149133 110 ## gi|289425758|ref|ZP_06427513.1| hypothetical protein HMPREF1034_1447 159 94 Op 2 . - CDS 149069 - 149446 185 ## PROTEIN SUPPORTED gi|90021194|ref|YP_527021.1| ribosomal protein L20 160 95 Op 1 . + CDS 149563 - 150603 812 ## COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components 161 95 Op 2 . + CDS 150600 - 151403 587 ## COG0421 Spermidine synthase 162 96 Tu 1 . + CDS 151506 - 152051 366 ## PPA2015 hypothetical protein + Term 152078 - 152126 0.6 163 97 Tu 1 . - CDS 152089 - 152817 171 ## PROTEIN SUPPORTED gi|154175107|ref|YP_001408238.1| ribosomal protein L22 164 98 Op 1 . + CDS 152931 - 153521 426 ## COG0566 rRNA methylases 165 98 Op 2 . + CDS 153555 - 154145 324 ## PPA2012 hypothetical protein + Prom 154164 - 154223 1.8 166 98 Op 3 . + CDS 154256 - 155281 1363 ## COG0191 Fructose/tagatose bisphosphate aldolase + Term 155298 - 155343 9.5 - Term 155053 - 155095 3.4 167 99 Tu 1 . - CDS 155341 - 155586 240 ## PPA2010 hypothetical protein 168 100 Tu 1 . + CDS 156094 - 157452 1122 ## COG2202 FOG: PAS/PAC domain 169 101 Op 1 . + CDS 157773 - 159266 1472 ## COG5016 Pyruvate/oxaloacetate carboxyltransferase 170 101 Op 2 . + CDS 159282 - 160856 1643 ## COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) 171 101 Op 3 . + CDS 160883 - 161125 282 ## HMPREF0675_5071 hypothetical protein 172 101 Op 4 . + CDS 161141 - 161497 389 ## COG1038 Pyruvate carboxylase + Term 161554 - 161596 1.8 - Term 161504 - 161550 7.1 173 102 Tu 1 . - CDS 161654 - 162190 505 ## PPA2004 hypothetical protein 174 103 Tu 1 . - CDS 162366 - 164228 1953 ## COG1217 Predicted membrane GTPase involved in stress response - Term 164250 - 164278 2.1 175 104 Tu 1 . - CDS 164361 - 164627 172 ## HMPREF0675_5067 hypothetical protein 176 105 Tu 1 . + CDS 164626 - 165153 393 ## HMPREF0675_5066 hypothetical protein + Prom 165160 - 165219 1.9 177 106 Op 1 . + CDS 165281 - 166885 1613 ## COG0477 Permeases of the major facilitator superfamily 178 106 Op 2 . + CDS 166910 - 167812 576 ## HMPREF0675_5064 hypothetical protein 179 106 Op 3 3/0.000 + CDS 167860 - 168780 946 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase 180 106 Op 4 . + CDS 168813 - 169502 633 ## COG3010 Putative N-acetylmannosamine-6-phosphate epimerase + Term 169581 - 169612 -0.6 181 107 Tu 1 . - CDS 169627 - 170349 557 ## COG2186 Transcriptional regulators 182 108 Tu 1 . + CDS 170479 - 171390 420 ## PPA1995 hypothetical protein 183 109 Op 1 . + CDS 171558 - 172844 1129 ## COG0104 Adenylosuccinate synthase 184 109 Op 2 1/0.038 + CDS 172903 - 174222 727 ## COG0151 Phosphoribosylamine-glycine ligase 185 109 Op 3 . + CDS 174219 - 175652 1392 ## COG0015 Adenylosuccinate lyase - Term 175398 - 175436 -0.7 186 110 Op 1 1/0.038 - CDS 175686 - 176630 513 ## COG0583 Transcriptional regulator 187 110 Op 2 11/0.000 - CDS 176637 - 178211 403 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 - Prom 178236 - 178295 1.6 188 110 Op 3 . - CDS 178309 - 178872 770 ## COG0450 Peroxiredoxin - Prom 178915 - 178974 2.6 189 111 Op 1 . + CDS 178862 - 179140 126 ## 190 111 Op 2 2/0.000 + CDS 179008 - 180270 998 ## COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase 191 111 Op 3 . + CDS 180273 - 180947 485 ## COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain + Term 180966 - 181019 8.3 192 112 Tu 1 . - CDS 181025 - 181978 656 ## COG2971 Predicted N-acetylglucosamine kinase - Prom 182093 - 182152 2.1 193 113 Tu 1 . - CDS 182342 - 182623 174 ## HMPREF0675_5050 hypothetical protein Predicted protein(s) >gi|302034479|gb|GL383156.1| GENE 1 42 - 1073 990 343 aa, chain - ## HITS:1 COG:aq_1370 KEGG:ns NR:ns ## COG: aq_1370 COG0797 # Protein_GI_number: 15606566 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipoproteins # Organism: Aquifex aeolicus # 265 337 71 143 171 81 56.0 2e-15 MTNTSTNAGTTLKRTVALAAAASLAVMGTIAEEAHAAPAGNLGAHAEKAPTQHTKKAPAE QAKRATTYTARFALTRVHLNVRSGHSTEYRRYGLLRPGDKLLIIGEDVRGWTPVNYRGKT AWVATRYITKMNRPVGIYAQRGDHNARSKAVQRDLSTLNYFPAKWVGLPYGPITTNAVKV FQRANALKQTGVTDAVTLGLLKSKADYQRAAAAEKSSTYKHAEHHSEHSSSTSRSTARPA RNTSPDVSTSGIAGSCQASFYDDSQTASGESFSSSALTAASKTYSFGTRLKVTNKANGQS VVVRVNDRGPYVSGRCLDLSSAAFSRISSLSAGVADVTYAKVS >gi|302034479|gb|GL383156.1| GENE 2 1387 - 2634 985 415 aa, chain + ## HITS:1 COG:Cgl0575 KEGG:ns NR:ns ## COG: Cgl0575 COG0596 # Protein_GI_number: 19551825 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Corynebacterium glutamicum # 5 415 17 427 427 436 53.0 1e-122 MTWNRNIPGLLTDDVRLRVPLNRSNPDDLRTIEVYARLVATPNGTDKPYLVFLQGGPGCE SPRPTLRDPGFPGWLSRALEDYQLVLLDQRGTGLSSPVSEPVGDAPSQAEYLTHLRADEI VEDCEDIRRHLGIQKWAALGQSFGGFTLLRYLSTYPESLSAGYFTGGLSAVGRSADDIYA ACYEQLRAKSLEYYKRFPGDRVRFAELAALAKKGEIATPSGDVVCPSRLRSLGHVLGASG GAEKLHYLLEYPHTSRAFRHDLAELLPYGGRNPLYAVIHESSYADGVVTDWSAARTLPDD FREDPTLLTGEHVMPEWFDTDQELRPWKEVADLIANHPWPKLYDPDVLRTAEVPCAAAVY HDDAYVPRKFSLETAALLPQMHAWVTTEYEHNGSNASGGAVLDRLIKLAKGEIVR >gi|302034479|gb|GL383156.1| GENE 3 2714 - 3427 604 237 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5237 NR:ns ## KEGG: HMPREF0675_5237 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 237 3 239 239 417 99.0 1e-115 MNDIPQAPTTWCDPDDVGAPLPETDEVEADPQTVQIPPAESFEVLRRASEEELRAQERGE QLNPLESGRAAITIALTPLCQLEGAVMLGVSLLEAVAKRVEQVDEDAVEAYLPDWLFDHD NLTAADVPGLLVERVRRDLADPVVVSTMGEEAVEQLRSGLSAILAAQRHDAAEFSRHVNP DVDPEWLIDGCQEICVALAAHAATIGWQRPEVDVSNVFASLDMVSEPDLVCTLLRQA >gi|302034479|gb|GL383156.1| GENE 4 3430 - 4164 395 244 aa, chain + ## HITS:1 COG:CAC0284 KEGG:ns NR:ns ## COG: CAC0284 COG0846 # Protein_GI_number: 15893576 # Func_class: K Transcription # Function: NAD-dependent protein deacetylases, SIR2 family # Organism: Clostridium acetobutylicum # 5 238 9 244 245 271 53.0 7e-73 MTGEQLAHWIEESTSTVFFGGAGMSTESGIPDFSSAGGLYTTQHDLPFPAEYMLSHSCLV EHPAEFFDFYRTYLVHPQARPNAGHRALAALERAGQVSTIITQNIDGLHQEAGSRQVIEL HGSVHRNRCLACGRAHPLSVIMDAPGVPRCSCGGMVRPEVVLYEESLRSQDLDNATTAIS TADLLIVGGTSLNVYPAAALLRFFRGRHLVFINREATGYDRAADLVIHDGLGKTLSAVQR AVMP >gi|302034479|gb|GL383156.1| GENE 5 4618 - 4956 226 112 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5235 NR:ns ## KEGG: HMPREF0675_5235 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 112 40 151 151 214 100.0 1e-54 MPSRHQTSGGTVHVPASIIGALLLGPGTNVTHQAMVLLTESGAATGDIDDLAGVTRRAMR DAFHESKLLTKCVQDIHVLLDAPGDPDEGYGWDIVDLWDDREGVVAGGRSWG >gi|302034479|gb|GL383156.1| GENE 6 5133 - 6668 1251 511 aa, chain - ## HITS:1 COG:DRA0147 KEGG:ns NR:ns ## COG: DRA0147 COG2986 # Protein_GI_number: 15807816 # Func_class: E Amino acid transport and metabolism # Function: Histidine ammonia-lyase # Organism: Deinococcus radiodurans # 18 507 13 500 524 351 47.0 2e-96 MNPTTVDAGAPLTPRDVVAVARLGAQVTVGEDAIERVKRASDLVESLADDPTPHYGISTG FGALASTRVPRDYRVALQHSLIRSHAASTGPRVESEVIRAMMTLRLKTMASGHTGVRPKV VTAYADLLNSGLVPVVGEYGSLGCSGDLAPLAHCALVLTGEGTVLTPDGDEVDAATGLAQ AGLKPVSLREKEGLALINGTDGMLSQLIMALADLDVLVPTADLATAMTVQALCGIDRVFA PDLQALRPHPGQATSAANILALLEGSDLIQAGREGAAKRVQDAYSLRCAPQVHGAVRDTM AHALQVAKVELASAVDNPVITDDMRVESNGNFHGAPVAYVLDFLAIAAADLASMSERRTD RMLDPARNRDLHPFLADDPGVDSGHMIAQYTQAGIVSDMKRLAVPASVDSIPTSAMQEDH VSMGWSAARKLRRAIDGMGAVIGIEILTAAKAIQMRGLEPSKLVADVIERMRQTIPGPGP DRFLAPEIDEAHRLVASGELLEVARQSVEVS >gi|302034479|gb|GL383156.1| GENE 7 6804 - 7994 710 396 aa, chain - ## HITS:1 COG:FN0740 KEGG:ns NR:ns ## COG: FN0740 COG1228 # Protein_GI_number: 19704075 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Imidazolonepropionase and related amidohydrolases # Organism: Fusobacterium nucleatum # 3 385 5 410 413 209 33.0 7e-54 MSIVINNIGLLVTNDPSVGTDELGQIRNAAVVICGDRIAWVGPSAQAPAADHQSDMAGAC VIPGFVDSHSHPVFAGDRSDEFDARMNGQRYEAGGILRTVRRTREAPMGFLDAVMTGILD EMARSGTTTVEAKTGYGLDVETEVKLARVASSHTDEVTFLGAHVVAPECQPDEYVRLVCG EMLHAVRPYVRWIDVFCETGAFDPDQTLEILRAGTDAGLGLRLHAAQLGPSEVIPQACEL GLAAVDHCTFLSDEDIDALKATGTVATLLPAAEFSTKQPYPDARRLIDAGVTVALATDCN PGTAFTSSIPFCLAIAVREMGMTPEQALWSATAGGAAALHRDDVGVVKPGARADLVSLAA PSWLHLMYRPGVPLIDRVCKAGRFLRLDQPRLRLDG >gi|302034479|gb|GL383156.1| GENE 8 7991 - 9331 722 446 aa, chain - ## HITS:1 COG:YPO1974 KEGG:ns NR:ns ## COG: YPO1974 COG0402 # Protein_GI_number: 16122218 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Yersinia pestis # 1 440 1 439 456 219 34.0 1e-56 MSTWFFPSALVEGRIAHNVRVQSQNGVITAVTIGAEPHRHTFDGVAVPGFANTHSHIFHR GLRGAGEGEDFWSWRTEMYRLANRLDPDSYYRLARAAFAEMVAAGYTSVGEFHYVHHQPD GTPYRDHAMELALVNAAIEAGIRITVLDTCYLHAGPGASLGVDQKRFGDGSVEGWLERWR ALRDALPDSPLVTVGAALHSVRAVSPDEMATAVSGLPERVPIHIHVSEQPRESTECLAAH GLTPTAVLDRAGVLSDRTTIIHATHLTGGDIAMIAASDTVVSLCPTTEADLGDGIARVKD LQDAGVRMAIGTDEDVITDPFTELRMLESTARLVTGTRGVIGCEALWKIGTRNGVESLRP AAEPLPRQTSTPGPGSAGLAAGDPADIVVVEPSSARLAGVDPTRWPLVATANDVAATIVA GEWNRLDAAVAEDLRHVLDELRGRDS >gi|302034479|gb|GL383156.1| GENE 9 9328 - 10524 709 398 aa, chain - ## HITS:1 COG:BH0761 KEGG:ns NR:ns ## COG: BH0761 COG0624 # Protein_GI_number: 15613324 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Bacillus halodurans # 4 398 13 414 414 181 30.0 3e-45 MTTWTAASLLAEIAAIGRNEDGSYSRFCLRPEEVALREWFVAKATELGLAIVTDANANIW AWWGTPGPDAVLTGSHLDSVPGGGAYDGPLGVVSSLVAVAKMQEAGIMPAKPFAVVAMAD EEGARFGMPCLGSRLASGKLSKAEAHTLVARDGQSLPDAWREAGLNPDLMGPDDVLLEAS CFVELHVEQGRGLADVGHPVAIATAVRPHGRWRAEFTGQGNHAGTTLIPDRHDPVVPMAQ TILAAREAAEREGCVTTVGRINVEPGGTNVIASAATMWLDCRAEESQTVTKVVEDIQQAS ETAADKQGCQVVWTRESWTDRTAFDLRARMLQILGEDIPQLSTGAGHDAATLATTMPTGM LFVRNPTGASHCPAESASDADCEAGAEALQTVLEELVK >gi|302034479|gb|GL383156.1| GENE 10 10524 - 12530 2031 668 aa, chain - ## HITS:1 COG:SPy2082 KEGG:ns NR:ns ## COG: SPy2082 COG2987 # Protein_GI_number: 15675840 # Func_class: E Amino acid transport and metabolism # Function: Urocanate hydratase # Organism: Streptococcus pyogenes M1 GAS # 2 667 4 671 676 998 69.0 0 MYDNSSTTAAMTIKLDAEFPPDPVFEPGIRRAPSRGFHLTPDQTKIALRNALRYLPPELH EKAVPEFLEELRTYGRIYAYRWRPAGHIKGRPIDDYEGRCTEGKAFQVQIDNNLDFDVAL YPYELVTYGETGSVCQNWLQYRLIKKYLSQLTEDTTLVVMSGHPLGLFPSRPESPRVIIT NSLMVGHFDNQKDWEICEEMGVANYGQMTAGGWMYIGPQGIVHGTFNTILNAGRIRLGIP ADGDLSGVLFVSSGLGGMSGAQPKAAEIAHAVGIIAEVDMSRIQTRLDQGWVGHVSDDLD EVFALAKKHIDEHTPISIAYHGNIVDLLKYAVDNNINIPLLSDQTSCHAAYDGGYCPQGL TFEQRTELLARDRDEYARRVNESLRTHYELIRTLTDRGTYFFDYGNAFMATVFESGVTEI AKDGDARNGFIWPSYVEDIMGPELFDYGYGPFRWVCLSGKREDLIATDHAAMDCIDPNRR GQDRDNYIWIRDAEANNLVVGTQARILYQDAQGRMDIALRFNKMVRDGEIGPVMLGRDHH DVSGTDSPFRETANIKDGSNVMADMATQCFAGNAARGMSLVTLHNGGGTGIGNAINGGFG LVLDGSERVDNVIRSSLLWDVMCGVARRGWARNAHSIETATEFNHEHNDAQITLPYLVDD DLIDGLVK >gi|302034479|gb|GL383156.1| GENE 11 12770 - 14659 1116 629 aa, chain + ## HITS:1 COG:BH0675 KEGG:ns NR:ns ## COG: BH0675 COG1472 # Protein_GI_number: 15613238 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase-related glycosidases # Organism: Bacillus halodurans # 27 614 129 686 686 281 35.0 4e-75 MKRRTVMAAAAGAFAASALPLSRAAADDTRSQLASMTLDQKIGQVLWTHVFGASADDASM ARKNQLAFGDDVRTPAQAVQKYHLGGVLYFNWSGNISTPTNPAAVAHLSNGLQEAARTSS TAPLAIAVDQEGGIVARITSPATEFPGNMALGAVNDPSAARAQGAVLGRELAALGINVDF APDVDVNTNPANPVIGVRSMGDDPVRVGVLGVEQIRGIQSRGVAATAKHFPGHGDTQIDS HLGLPVVEYGRTTLERHLVPFRMAISAEVDMIMTAHIIVKTLDPTMPATLSKKVLTGLLR EQMGYRGIITTDALDMEGAQLAVMTEDEKGTYTRLKAAADAEGNDPTAADEGHASAEFNA FMKPIRGRVAVQAFEAGSDILLNPHDADAVVTAMRRAIADGRVSERRLDESVLRILSWKR RRCITGRPVDLAAADREVRSGRKVADDIAARSVTMLVNDGTLPLKPSRVLVTGTRRGNPE YLVEPLRLAGFTPILVPSTGQEPTTADVEKAVTVGVDAVIVVTHGLKRGDAQDAMVKALA RTGNPVVEIMTGTPYDVAMTHRPHAALAVYSNRKVSMVAAVAMMAGRNPVGRLPVRVPDP NGGTAFPRGFGLSYRATPGPYEGPGAKTA >gi|302034479|gb|GL383156.1| GENE 12 14672 - 14914 104 80 aa, chain - ## HITS:1 COG:DR1839 KEGG:ns NR:ns ## COG: DR1839 COG0545 # Protein_GI_number: 15806839 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerases 1 # Organism: Deinococcus radiodurans # 3 79 75 151 152 90 53.0 9e-19 MALSNGREFDSSWNRGEPLTFQLGAGQVIPGWDEGVQGMKVGGRRKLVIPHHLAYGPQGI SGVIAGGETLVFVCDLVNVI >gi|302034479|gb|GL383156.1| GENE 13 15114 - 15353 286 79 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|50843599|ref|YP_056826.1| 50S ribosomal protein L32 [Propionibacterium acnes KPA171202] # 24 79 1 56 56 114 100 2e-24 MPVSVRWPTAANSPESRSQAGEAMAVPKRKKSRSTTRHRRAQWKTTPTQLVEIRVEGKVL RVPRNLVKAYHSGLIDVED >gi|302034479|gb|GL383156.1| GENE 14 15289 - 15594 508 101 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|50843598|ref|YP_056825.1| 30S ribosomal protein S14 [Propionibacterium acnes KPA171202] # 1 101 1 101 101 200 100 4e-50 MAKKSKIVAQKKREKLVAQYAERRAELKAIMKCPTASLDERMEASRKLSRLPRDSSPVRL RNRDQVDGRPRGYVGKAGVSRARFREMAHRGELPGITKSSW >gi|302034479|gb|GL383156.1| GENE 15 15594 - 15764 286 56 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|50843597|ref|YP_056824.1| 50S ribosomal protein L33 [Propionibacterium acnes KPA171202] # 1 56 1 56 56 114 100 2e-24 MAKKTTQLRPIIKLRSTAGTGYTYVTRKNRRNTPDRLVLKKFDPIVRRHVEFKEAR >gi|302034479|gb|GL383156.1| GENE 16 15764 - 16000 412 78 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|50843596|ref|YP_056823.1| 50S ribosomal protein L28 [Propionibacterium acnes KPA171202] # 1 78 1 78 78 163 100 6e-39 MSRRCQVRGTKPEFGNNVSHSQRHTKRRWNPNIQKKRYWVPSLGRKVTLTLTPKAIKEID RRGVDIVVAEMLTRGEKI >gi|302034479|gb|GL383156.1| GENE 17 16097 - 16342 429 81 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843595|ref|YP_056822.1| 50S ribosomal protein L31 type B [Propionibacterium acnes KPA171202] # 1 81 1 81 81 169 100 6e-41 MKQGIHPDYHPVVFRDISADTAFLTRSTVTSSTEIKWQDGNTYPVIDVDITSASHPFYTG KAKIVDTAGRVEKFNRRYGKK >gi|302034479|gb|GL383156.1| GENE 18 16570 - 17631 909 353 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 8 332 6 324 329 354 55 1e-96 MTVKTTADKAKPILSVRDLTKHYPLKSGVVRHTVGYVKAVDGVSFNLYPGETLGVVGESG CGKSTLGRLLVNLEPPTSGTITFEGRDVTNLTGSAMRKLRRDIQIVFQDPYTSLDPRMTV GDIVGEAFRIHPDAVPRRKRTERVKELLDLVGLNPEHINRYPHEFSGGQRQRIGIARGIA LNPKVLVCDEPVSALDVSVQAQVVNLLQKLQRELGMAYIFIAHDLSVVRHISDRVAVMYL GRIMEIGDEEQIYERSTHPYTQALLSAVPVSDPSARGMRHQILLHGDVPSPANPPSGCRF HTRCWRAQPLCSEKETTLTMHADGHGEHACRCHFAEIFEKASDDISPVSRKES >gi|302034479|gb|GL383156.1| GENE 19 17621 - 18658 551 345 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 30 315 28 306 329 216 43 4e-55 MARKTLTRARLHMEPVDGLLLKVDDLHVEFRTRDGVAKAINGTSFTLSERETLAILGESG SGKSVTAQAIMGILESPPAQITGGRIEYCGVDLLTVPEKKRRQIRGEHISMIFQDALSSL NPVFPVGWQIAEMFRVHRGMNRSDSMSEAIRLMERVHIPAAKERANNYPHQFSGGMRQRI MIAIAIALNPWVLIADEPTTALDVTVQAQIMTLLKELQEESGMGLILITHDLGVVADVAD DIAVMYCGRFVEHADVRRLYDNPAHPYTVGLLDSIPRLDQKGHELYAIGGLPPSLTNLPS GCSFHPRCRWATEECRVGGAPQFVEVEPGRWAACHHTEEVLRRDR >gi|302034479|gb|GL383156.1| GENE 20 18668 - 19639 730 323 aa, chain - ## HITS:1 COG:Cgl1946 KEGG:ns NR:ns ## COG: Cgl1946 COG1173 # Protein_GI_number: 19553196 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Corynebacterium glutamicum # 29 321 56 340 344 250 47.0 2e-66 MTESRTNLSPLGSSGPEAMADPTPGENDVLGNSKPRSVWNDAWDSLERNPLFWISVTLIV VFLVMAAVPAIFTSKDPTDCNLSAARHIPSAVHWFGTDIQGCDVYSRTVYGARSSILVGV LATLGTTILGAFIGLVAGFRGGWLDTLLSRTGDVFYAIPLLLGGIITLYTFPNEPGTPYL VMVLKVVGAIIILGWPSIARLMRSSVLQVLPHDYVQAARALGASSWRIIRSHILPNAVAP VIVVATINLGAYIAIEATLSYLGIGLQEPAISWGVSISDASGLGYVRSAPFMLLFPSLFL SLAVLAFIFLGEAAQDAFDPKQH >gi|302034479|gb|GL383156.1| GENE 21 19632 - 20555 880 307 aa, chain - ## HITS:1 COG:MT3766 KEGG:ns NR:ns ## COG: MT3766 COG0601 # Protein_GI_number: 15843279 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Mycobacterium tuberculosis CDC1551 # 1 306 1 307 308 296 56.0 3e-80 MSRYIVRRILQMIPVLIGTTFIIFCLVFALPGDPTAGRCGERPCPPSYVAAFRAEYNLDK PLLVQYGLYLEKLLHGNLGVDYYGNTVVSELGARYPVTIKLAIIALLVEIVIGILAGAWA GVRRGKFIDYFVLVSSLIVISIPIFVIGSLAQLVFGLRLGWFPVTAGDGSWGALVLPGLV LGALSVAYVARLTRSNLLENQRADYVRTAKAKGMSPSRIVTVHTLRNSLIPVITFIGYDF GALMGGAIVTERIFNINGIGNYVYRSINQRDGVSVVGAVTCLVLVYLLANLLVDLLYGVL DPRISHD >gi|302034479|gb|GL383156.1| GENE 22 20628 - 22295 1840 555 aa, chain - ## HITS:1 COG:Cgl1944 KEGG:ns NR:ns ## COG: Cgl1944 COG4166 # Protein_GI_number: 19553194 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Corynebacterium glutamicum # 53 541 44 520 534 327 39.0 4e-89 MRHMRPLIALSLAGLMTLSACGEDVAAKDDSAAGSSAAGGSNNSAPAKDGGSITVRGCTP QNPLIPSNTNETCGGNVLDAVTARLIHYNPDTAKPEMDIAQSIETKDNQNFTVKIKPGYK FSDGTKVKAQNFVAGWNWAAYGPNAQQSGYFFEPIEGYADEQCGDEACKTKPKVKTMSGL KVVDDHTFTIKTTEKVSNLKVRLGYTAFAPLPDAFLKDPTNKKWEKMPIGAGPYKVTDNT ATAITVAKNENYAGAYQGHVDKVTFKIYNDASPAYNDTVANNLDINDLVPTDQLTNDQWK SDLSGRWAIRQSGINQTLTYSGKDKQLASNKDLVKALGMDIDRETITKQIFAGSRTPADG WVSPVVDGYKKDQCGQMCKYDKDKAVELYKKSGGYKGTLTIAVNGDGDHKAWSQAICNGW KNDLGLKCQLKVTPDFKTLRDMITKRQLQGFFRTGWQMDYPSIENFLTPMYATGASSNDN DYSNKAFDAKLADAAAATNTGEANKLYQEAEKMLVEDPPNIPLWTTSTPFAWSNKVANVK LTPFGTIDFQSVSVK >gi|302034479|gb|GL383156.1| GENE 23 22595 - 23134 538 179 aa, chain - ## HITS:1 COG:PA4171 KEGG:ns NR:ns ## COG: PA4171 COG0693 # Protein_GI_number: 15599366 # Func_class: R General function prediction only # Function: Putative intracellular protease/amidase # Organism: Pseudomonas aeruginosa # 6 174 11 179 187 189 57.0 2e-48 MAARALIAVTDFGIEEAELVEPLNALKKAGIEVTVASNSGESIQTVTGDKDWASKVNADS RLADAKASDYDLLVIPGGTVNADTLRIDEDGRRLVKEFATAGKPVGAICHGPWVLIDADV AKGKTMTSYISIRPDLENAGASWVDKELFRCPGNGWVLLTSRNPNDLPAFAKALVDEIS >gi|302034479|gb|GL383156.1| GENE 24 23502 - 24404 693 300 aa, chain - ## HITS:1 COG:MT3785 KEGG:ns NR:ns ## COG: MT3785 COG1408 # Protein_GI_number: 15843301 # Func_class: R General function prediction only # Function: Predicted phosphohydrolases # Organism: Mycobacterium tuberculosis CDC1551 # 1 300 9 299 319 285 49.0 1e-76 MKTGFTAVASVIGVGVAGLAYGVIEAHRFVVRHVEVPVLKPGSSPLRILHMSDLHLLARQ ETKRRFIRQLDALNPDLVINTGDNFCSADSLQPLLDDMSGLLQRPGTFVFGSNDYLVPKF KNPFSYLLWGRSQQATEPVPELPHEELRQAFTSAGWLDLNDKSETLEVAGHRLTLRGTDD AHHDRDHYEEVAGPPDGEADLNIGVTHAPYLKILDAMVSDGMDIVFAGHTHGGQVCLPFT GAIITNCDLDTERAKGLSQHGRGGHTGWLHVSAGLGCSPFAPYRTFCRPEATLLTLVPRP >gi|302034479|gb|GL383156.1| GENE 25 24418 - 26940 2120 840 aa, chain - ## HITS:1 COG:Cgl0279 KEGG:ns NR:ns ## COG: Cgl0279 COG0744 # Protein_GI_number: 19551529 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Corynebacterium glutamicum # 29 801 14 777 795 249 30.0 2e-65 MSEASRILGYMRSDRHGKLYPLAMFGIVSILTGLLMAGFVVPLAALTGGTAKMVASSMED LPPELMSTPQAQKSHILMADGSVLATFYDENREYVPLSKISKQMQTAQVAIEDNRFFSHG AIDLKGTARALATNIAGSARQGGSTLTQQYVKQIRIEAAVAAGNEEGVQAAQEPTITRKI QELRYAVAMEKKLSKKQILERYLNIAYFGDGAYGVESAAHHYFGTTAANLDLAQSAMLAG LVQNPVAYDPVNHPEAAMNRRNIVLARMAQLNLISADQARKAEATVFDKSKVFYPKNGCI SSKYPFICDYAYRSLLQMPSLGKNPEERAKMVKRGGLTIQTSIDPKVQDAAQNAVSNVVG PKDPVLAGTAIVQPGTGLLMAMAQSRPIMGDKPGQTYYNYMAPASMGGATGFQAGSTFKA FTTAAAIAKGIPMSKHYTASSPMDFTGEKFTSCKGTFKSGPFRVRNSTGHSWNIGLREAA AWSVNTYFVQLEQDVGMCGVTKMAQDSGVKLSSGKDIVKTFQKVPSFTLGTAYVSPLSMA SSYASFASRGIQCDPIILTSVKNRDGSPLKVPTGNCKRVMPQKVADGVNSVLSGVMDATG MPARIPGGYPQAGKTGTTDAHEAAWFDGYTPQAAGVAMIAADGGNSYFRGDKSRSIKGIR TSTGVYLNGSGGSDAGKIYRAAMAGALQGKPKTEFVAPTDEVRYGKLIKIPSTDGMTYPQ AKAAILKAGFRTKVWHVWDDSEPGTYLGTDPEGSAHAGAAVTLKISKGPKPAPKPTYAPP QPPQNQPNNPGNEQPGGQQNNPPGDNTAGNNGGTEGNNGGDYGGNTGGGQQNPPGTTGPR >gi|302034479|gb|GL383156.1| GENE 26 27037 - 27234 93 65 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSLPACFVAAIRRATRLIDAASATEDPPNFWTTRVINPPARFGHQSLTGDSTATPPYTGA PQSIA >gi|302034479|gb|GL383156.1| GENE 27 27128 - 28402 1250 424 aa, chain + ## HITS:1 COG:MT3812 KEGG:ns NR:ns ## COG: MT3812 COG0527 # Protein_GI_number: 15843329 # Func_class: E Amino acid transport and metabolism # Function: Aspartokinases # Organism: Mycobacterium tuberculosis CDC1551 # 1 424 1 421 421 506 64.0 1e-143 MTRVVQKFGGSSVADAASIKRVARRIAATKQAGNDIVVVISAMGDTTDDLMDLALEVSPQ PAPRELDMLLTTGERQSAALLAMALSDVGIPARSYTGSQAGVITTAAHGNARIIDITPGR IEKSLEAGDLVIVAGFQGVSQTTKDVTTLGRGASDTTAVALASSLGADFCEIYSDVDGVF TADPRIVKGARRIPEISYEEMLEMAACGAKILHLRCVEYARREDVPVHVRSSFSDKPGTW VKDPTDITKGSDMEEAIISGVAHDRSEAKITIAGLPDAVGRAAQIFEIIAHADINIDMIV QNASRVMNGRTDLSFTLPMNDGPTAVRALTAVKDELGYEQILYNDQIGKVSVVGVGMRTH PGVTSTFFRALADCGINLQMISTSEIRISVVVDADQVDEAVRVAHTAFGLDAEGEAVVYA GTGR >gi|302034479|gb|GL383156.1| GENE 28 28410 - 30236 1283 608 aa, chain + ## HITS:1 COG:Cgl3028_1 KEGG:ns NR:ns ## COG: Cgl3028_1 COG0728 # Protein_GI_number: 19554278 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein, putative virulence factor # Organism: Corynebacterium glutamicum # 49 527 41 527 640 177 31.0 6e-44 MPESHDDDVYDLLRLPEAAPPVDVYDSLDIDAVTFGADVSRRSLRRFGADEDFDRTRVIS GVITSPATSAAPEAPAEGSLRRASIVMAAGTMVSRILGFVRTYLLTVIAAGTSLTLDAFQ AANTLPNVVFILLSAGVLNAILIPQITRAMKQPDGGQEFVDRLLTVSFASVLVVTTVATL ASPWLLDLYFSSSGATRHLTIFFGFICMPQIFFYGLYAILGQVLNARNQFAAFMWSPVLA NVIQIAGLVWFLVQFGAHPDPATWTPEMVWVLAGTTTLGIIIQGLFLIIPLHRGGFRWRP RWGIRGYGLGAAARITVWTFTALVIAQFAGIIMKKMLSHVRLVHPEVSSSISAYDNAFLI FMLPQSFIMTSILTALFPRMSRANADGSNSAMKKLLRQGLEMPALAIIPCSLAMVVLARP GVQTVFSLEPGQVGSLARAVAVMGVGLLPFGIATLQQRYCFAREDGKLNLIMQAVTTGVQ LIILVTMFVFPPQHALVVVAAAQTIANLVGAVAWLVVASRQLGGIGMGEVNRLWTKLAVA SIVAAVPTYLVAHGIDAAGHGAWVGHAGGTLIGGVLFVALFLVLAKILRIVEVLDLLNPM LRKVMRRS >gi|302034479|gb|GL383156.1| GENE 29 30271 - 31827 956 518 aa, chain - ## HITS:1 COG:L81453_2 KEGG:ns NR:ns ## COG: L81453_2 COG0726 # Protein_GI_number: 15672265 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Lactococcus lactis # 309 503 28 219 222 133 39.0 7e-31 MSASPRRSIRALAIALVALLSLGACSHDDGDPNASPSDIRSTMKSTSVASDHVSGASMTS TSFRKPSDISIKVPTITTARNLSQAIEVVRERTLRGAAWDSATKVTMTGHFISSTTDLLG VELQAEVTKGKTTSQSTTTLWYDATMKQTLSASALISWPGWPKFSQEVVKSAHADGLNGK KAEAALQQPQAPYGTGPALSFDSKGDLLVKFPAGAIDSVQRTVLIDSKAVSPTLSGLGQK ALGASLHPTSFTGTPSTDATWFTKLKTSPKPADSPNTRPLPGDPATKTSSTPTHPSTAIG VDCIVENCVALTYDDGPADTTAKVIDGFTHAKAAATFFLLGTNVDNHPDTSTLLAGSGFE VGSHSASNRTLTTLGPRGRTAEITDAVNALSKLTGRPTMLFRLPYGAHNEQIDAAMAKQN LAMVNWTADSNDWQNRNAGKITKTVTEYATTYTQPIIVLHDTYSSTADATSGIIEALRHK GMTLVTVSELTVNTGGLETGKVYCRGTAVNQNGFGCHN >gi|302034479|gb|GL383156.1| GENE 30 31984 - 32907 775 307 aa, chain - ## HITS:1 COG:SPy0576 KEGG:ns NR:ns ## COG: SPy0576 COG0701 # Protein_GI_number: 15674665 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Streptococcus pyogenes M1 GAS # 2 303 5 300 300 150 30.0 3e-36 MSELPPQVNAWLVIFIGIWLQAVPFLLLGTIISSTLTAFLKPQALARFLPRQTALAVVVA GLAGIALPACECASVPTTKSLVRAGVPTAAALTFMVASPAINPVVIAATAVAYTVNPRMA VARFIAGLLAAVLIGLGWIWLGRPLRGVDDGSPGSACEEACGLHDHQPRTMSAMAETFRS ELTHDFIQSCGFLVIGAAIAATVKVCVPIAWMQALTINVVVEAAVLSLLAVIVALCSEAD AFMAVSLTSFSPTAQLAFLAIGPIVDVKLMAMEGGAFGAGFLKRFVPLATCCCFVSAILI GALIFSS >gi|302034479|gb|GL383156.1| GENE 31 32904 - 33764 551 286 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5208 NR:ns ## KEGG: HMPREF0675_5208 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 286 1 286 286 518 99.0 1e-145 MRIRPGGRTAVEGLTLLACAALGFYLLLSGRVHLFVGTIITTLLWVACPVLTVMGLWTLA HAVRHPNTTGHHRARIGLLIVAPVALGLFVPLEPLTLLGAASYRPAVRGTSSSPAHSSSW NNGLPAAPTSISPVAIDPKTGKTVGGYDNGGDNIGSDRNGPMGPPPAQWPALKGNPAELT IYDYVQRADDPRGIATLKGRKLTMIGFVSAAPEDPAHAWVLARLKMWCCVADALPFMTTM VGASSRPTGGSWIRVTGTYLPSSPNGDTRFRVERIDQIPVPENPYI >gi|302034479|gb|GL383156.1| GENE 32 33761 - 35254 1063 497 aa, chain - ## HITS:1 COG:L81453_2 KEGG:ns NR:ns ## COG: L81453_2 COG0726 # Protein_GI_number: 15672265 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Lactococcus lactis # 289 482 28 219 222 131 37.0 2e-30 MLPKPNLPLRVTAVALTTCLALSACSSHSDVKNPSQSGSSSTAGVSNATLAKIPAAQAGA TDITFNAAPEKVKAIFPRFAKARNLSTAVEVVKGRMLRDSWQQNASDVNVTSQIIASNDA ALGVLVTNQTTIAGKKQTIPATIWYSTAAQQSYSSPALVKPDKWADLTTALQDAGKDQSL DGGKIAAAIKAKSAPYGSGPALGFSHNGDLLASFASGVVTDKAVTLVVPSDKTKGMLSNF GTQAQKASTNPGTFTGTTSQPVDESLKATDTSGRPPTAVGPDCRVLHCVAVTYDDGPSAM TPELLNTIKKFKLSITFFEMGNSIMAFPNTAQKVAAAGMEIGNHTVTHPNLPAKTPDRIR RELEHNSQLIKQFTGATPLLFRPPYGAHNDTVDKVAKDNGMAIIQWQIDSEDWKNRNPEM TYKNVMTALPYTAPIVLEHDIQKASIDAAPQIYKDLEAKGKTIVSVSELSLNTGGYQAGH AYCNGTVKPQSGYNCKG >gi|302034479|gb|GL383156.1| GENE 33 35444 - 36145 773 233 aa, chain - ## HITS:1 COG:MT0192 KEGG:ns NR:ns ## COG: MT0192 COG2267 # Protein_GI_number: 15839561 # Func_class: I Lipid transport and metabolism # Function: Lysophospholipase # Organism: Mycobacterium tuberculosis CDC1551 # 3 228 138 319 323 67 25.0 2e-11 MQIAHQENAGKKVFLFGHSMGSFAVQSYGAKYPGTVAGIVSNGGGIAVNPWGRDTEGPEK VTAHDLTDAEKNAAPTISQLLPMDKLTSFNGILLTQAVRHPKAIHLPSTAAEAFIQFKNP LANGVCTDPAVIEDYKKDPLNNKYMSLGMVKQMGVAQVYNTFNAPSFSEPTLIMHGANDG IVPSYFDVNWYNAIGSKDKKIIEWEGLMHETINEPVKDQVDDTIINWINAHNK >gi|302034479|gb|GL383156.1| GENE 34 36092 - 36265 79 57 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313802968|gb|EFS44179.1| ## NR: gi|313802968|gb|EFS44179.1| conserved domain protein [Propionibacterium acnes HL110PA2] conserved domain protein [Propionibacterium acnes HL082PA1] # 14 57 1 44 44 65 97.0 1e-09 MPEEEHLFAGVFLVGDLHELVHVVDEVAPIVDVATWDGVVDVWARATTMPAVIEAVG >gi|302034479|gb|GL383156.1| GENE 35 36395 - 36565 248 56 aa, chain - ## HITS:1 COG:no KEGG:PPA2142 NR:ns ## KEGG: PPA2142 # Name: not_defined # Def: putative lysophospholipase # Organism: P.acnes # Pathway: not_defined # 1 56 1 56 373 98 100.0 1e-19 MTFTKKLSALAIAGTMAITGASIATVPAVAADKAPAPATATVQSKLITGYTTSTDQ >gi|302034479|gb|GL383156.1| GENE 36 36844 - 37416 698 190 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5204 NR:ns ## KEGG: HMPREF0675_5204 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 190 1 190 190 259 100.0 3e-68 MIKNRLVAAGAAAALATGTALMAVPAHAATPAPAPTPAPSAPAKPGINVSKLPIHIDFDC LKKNAQERHQIELKIAKILVKDGTAKSKAVAVDSAKEIIDTVLKDPSLLAKPGALVTKIV KIITDNALKAFGDTTALGDLKQLAQDIVNNLKAAKACFVINIPGQPPKIQHVGHLGDLQS AAWLPASQVR >gi|302034479|gb|GL383156.1| GENE 37 37656 - 37859 86 67 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKYKRNKTSNRTSIRGFLFVVRERGVEPPRPKGHWHLKPARLPFRHSRIGLTWQTQPKDG STKMAWK >gi|302034479|gb|GL383156.1| GENE 38 37939 - 38637 456 232 aa, chain + ## HITS:1 COG:no KEGG:PPA2140 NR:ns ## KEGG: PPA2140 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 232 1 232 232 349 100.0 5e-95 MLSFLAAAFALGIAGFDPLGSLVLLAALGLGVRRRGVVTLLVTSVGTSAGFGIAGVLGLG ALLTRLGVHGFHVPHVVWVCLVTVLGVVFVAWAAWRSRPGAPTKDFGGDTSAAPRSTAPR ALAVSGLLVGLSSLIDPAFWAMLVHAAHLPHQSWAVVESLIWVACSHSLLIVLVIAYLIG GPDRVASMVTGIRESHAVAVRRGISALLAAFGILLLADVIGVVATGQWFFEI >gi|302034479|gb|GL383156.1| GENE 39 38643 - 39644 846 333 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5201 NR:ns ## KEGG: HMPREF0675_5201 # Name: not_defined # Def: cutinase # Organism: P.acnes_SK137 # Pathway: not_defined # 1 333 83 415 415 587 100.0 1e-166 MFVGVRGSGETPPYGDTITSIRDALAQKWRGKGTVRQVYLNYPAADPHTLQNTPMSSLLF DSTMPSTEYFDSAALGAKKLIALLNTEKKQCPKEWVVLAGFSQGSQAITQALAQTDTPQR LAGAILVGNPDHYPGQNVQEVSGDADQSAIGMAAILYYLRERANATPGANRDAQMRAIIE ATLSLSQNSINQKALDADMSKAGAAIPAEAYPETYSVCMKGDPVCDTAPALTRILTLQST WQDELNQGRPIHMGYTRTVMEGALDRIAQRINAIGAAEAKGTPLPHGSTVAVTTRDWGPL QIGVAVGAGVAGLGAGWLLGRAGRRRQRRRRWH >gi|302034479|gb|GL383156.1| GENE 40 39940 - 40401 544 153 aa, chain - ## HITS:1 COG:VC1075 KEGG:ns NR:ns ## COG: VC1075 COG1881 # Protein_GI_number: 15641088 # Func_class: R General function prediction only # Function: Phospholipid-binding protein # Organism: Vibrio cholerae # 1 150 24 177 180 132 47.0 2e-31 MKITSTSITEGQPIELAYAHADAGGKNISPQLSWTPGPEGTKSYAITIYDPDAPTGSGFW HWILADIPADVTSLGEGGPLPAGVREWTNDYQEEGYSGACPPPGPAHRYIHTVHAMPTEH LDIPDEAANVQVRFAIHTTELDSASITGTFQQS >gi|302034479|gb|GL383156.1| GENE 41 40857 - 43199 2078 780 aa, chain + ## HITS:1 COG:CAC0480 KEGG:ns NR:ns ## COG: CAC0480 COG1328 # Protein_GI_number: 15893771 # Func_class: F Nucleotide transport and metabolism # Function: Oxygen-sensitive ribonucleoside-triphosphate reductase # Organism: Clostridium acetobutylicum # 21 780 3 695 702 531 39.0 1e-150 MSTIVQPDDQTISQQRAVPTSIRKRDGRVIRFDSTKIVEAVRKAFVACGMGTSELHASEV ALEVMSRLSEMGEETPDVETIQDLVEKTLMDQGHDDVAKAYILYRQRRTVARDQQSALMR TLREITFASAEEADAKRENANVDGNSAMGSMLRYGTESAKQFNLLEVLDPAHAAAHRDGD IHIHDLDFLTLTTTCCQINLTDLFEHGFSTGHGVLRAPQSIGSYAALACIAIQSNQNDQH GGQAVPNFDRDMAPGVAKTFKRAAQTGLARIFEVLGGDEDKVDEVREAASEWTLEPDETG LAAEREQVGRLFAGLARDTDRLAERIRRQALEETRRQTYQAMEALIANLNTMNSRAGAQT PFSSINYGTDTRPEARMAMRCLLEATEAGLGGGETAIFPIQIFRVQKGVNLNPGDPNYDL FRLACRVSAKRLFPNFSFQDAPFNAEFYRPGHPETEIAYMGCRTRVMSNVHDPSRAQTWG RGNLSFTSINLPRLAIEAHHDVDAFFASYDRMIDLVIDQLLDRLKIQSHKLVRNFPFLMG QGVWIDSEELRADDSVAEVLKHGTLSVGFIGLAETLTALIGVHHGESEEAQQLGLRIVGH LRERMDEAAERTGLNFSALATPAEGLSGRFVRMDRQRYGSIPGVTDREYYTNSFHVPVWC HIGAADKIAIEAPYHAFTNGGHISYVELSGDPARNVDAFVAIVRHMAASGIGYGSINHPV DRDPQCGYTGIIDDECPGCGRAEGSGPFDRIRRITGYLVGTLDRFNDAKRAEVRDRVKHG >gi|302034479|gb|GL383156.1| GENE 42 43460 - 43711 138 83 aa, chain + ## HITS:1 COG:SP0205 KEGG:ns NR:ns ## COG: SP0205 COG0602 # Protein_GI_number: 15900141 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Organic radical activating enzymes # Organism: Streptococcus pneumoniae TIGR4 # 4 75 112 180 196 67 45.0 9e-12 MGWDVWSWSGYTVEALMRQARRDAELADMLGQIDVLVDGPFQLVHRTLTLPWRGSSNQRV IDMPATLRGGRAVEWADRAGNLR >gi|302034479|gb|GL383156.1| GENE 43 43726 - 46317 2113 863 aa, chain - ## HITS:1 COG:Cgl1878 KEGG:ns NR:ns ## COG: Cgl1878 COG4581 # Protein_GI_number: 19553128 # Func_class: L Replication, recombination and repair # Function: Superfamily II RNA helicase # Organism: Corynebacterium glutamicum # 53 852 38 840 850 808 51.0 0 MRLAEALDDMVDGRAPVTTDRGERQPGWDSPGARPLDADMALDHIERAVAADGISMYEHQ EEAILEILAGNHVIVTTPTGSGKSLIATAAHFACVAAGGRSYYTAPIKALVSEKFFSLCE IFGAANVGMVTGDASVNADAPIICCTAEILANIALREGHHASIDQVVMDEFHFVGDPDRG WAWQVPLSELPQAQQIIMSATLGDVSDLSVGLTTATGRPTSVITGVVRPVPLEYSWSMKP DHEAIEELVADQKAPVYIVHPSQKQAVERAQSMTSMKLVSTEERHAIAAEIAGFRFAKGF GSTVRKFITAGIGIHHAGMLPKYRRLIETLAQQGKLKVICGTDTLGVGINVPIRTVMFTS LTKFDGRRTRVLKSREFHQIAGRAGRAGFDTVGYVVAQAPEHVIANHKALAKAGDDPKKR RKVQRHKPPEGFVNYSEETFTKLIESTPETLHARMRITEAMLLNLLQRDEDTARAVQHLV EAATPAVAERRRLYRRAVQIGLSLLRSEVVHRLEVPTPGGRRFAMNEALQDDFALNQPLS AFASEAVATLDPDSPSHALDVVSVIEATLDNPMTVLIAQQHAARGEAIAHMKEDGYDYED RMAAVEEIEWPRPLEDTLNALFDIFAPSHPWVPADALQPKSVVRDMYERAMTFGEFCAHY KVQRSEGLVLRYLTDAYRALRQTVPESERTDELSDVISWLGEVVRSTDSSLIDEWEDLTH PLDEEPEEVRPARTFTSNQRAFTVMVRNAMFRKVILAADDDFEALGALEPERSAMTTTAW EDTLGTYWDEHDEINDGPDARAPGLFMIENESRRRDSRIWLVRQIIDDPAGNHDWSITAT VDLDECDEADDLVLRTRAFARLD >gi|302034479|gb|GL383156.1| GENE 44 46473 - 47003 525 176 aa, chain - ## HITS:1 COG:DRB0092 KEGG:ns NR:ns ## COG: DRB0092 COG0783 # Protein_GI_number: 10957408 # Func_class: P Inorganic ion transport and metabolism # Function: DNA-binding ferritin-like protein (oxidative damage protectant) # Organism: Deinococcus radiodurans # 2 174 35 222 241 75 31.0 7e-14 MANTVNVPNPAGQTTTKLENAESGFKASETLAANLQKVLVDFIALELVGKHAHWNIVGPN FRDLHLNLDEVVEIAREGADEIAERMRALHASPDGRPAVVAASTTLPESPQGEVLTHDAI KVVTASIESVTGTMREVHDQVDEEDPTSADILHGLIQQLEQQAWFISAETRTPTAH >gi|302034479|gb|GL383156.1| GENE 45 46988 - 47251 130 87 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|315079328|gb|EFT51329.1| ## NR: gi|315079328|gb|EFT51329.1| hypothetical protein HMPREF9565_00447 [Propionibacterium acnes HL053PA2] # 17 87 1 71 71 135 98.0 1e-30 MIFPATTSSGKVSRSSVRPKSSTSALISHIMPYEGHLADTKSDQHSAAHIFRVWDGITHV RPVLPYMYAGGRLLATPNEGDVAWLTP >gi|302034479|gb|GL383156.1| GENE 46 47172 - 47837 696 221 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5194 NR:ns ## KEGG: HMPREF0675_5194 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: Pentose phosphate pathway [PATH:pak00030]; Pentose and glucuronate interconversions [PATH:pak00040]; Arginine and proline metabolism [PATH:pak00330]; Glyoxylate and dicarboxylate metabolism [PATH:pak00630]; Metabolic pathways [PATH:pak01100]; Microbial metabolism in diverse environments [PATH:pak01120] # 1 221 1 221 221 354 100.0 1e-96 MSAEVDDLGRTDDRLTFPDEVVAGKIIAVLPDVPAADLMAPVEAMIQEKVRVFALPVADA ERRRAVLRIYRRRAVVGVHGVMTVEDVQGLVDDKVSFALPVAANREVLDALRQAGIPAAP DALTPNEVRAAWGAGADAVQVAPADMGSASYGDILTRMAPGAALIPRGGVGSYALRRWLA AGALAVCLDDVLVGDACEDGIVSALRERCRSVLQVVADADA >gi|302034479|gb|GL383156.1| GENE 47 47879 - 49057 596 392 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5193 NR:ns ## KEGG: HMPREF0675_5193 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 36 392 1 357 357 480 98.0 1e-134 MGVCITLSLGDGAVLVRHTITSLRLSYSRSTKGGRVSAKYRRALALTSVLVISTSILTPP VCPTPTPWSVSAAHAAPPGATPPGNLTMNASLDRSGTVQVKGALRTHTKQPVSGALINLA VDGKPLAVGVTHDNGSWSGTFRLPPTMQAGTHELSATFDGTEGVGAASASGTFSIAAQPT VLTAAVKPTTAAPGALLNVNGTVTLPTHRRVTDSHVAILLGTDGQAALTAPTDSQGNYQA AFQVPLDAPNGPLTVTVKLVDSRYGVSQQAVTVQVKSASPTPTPTLTPSPTPTSVTPTPS SPSTPVATHDSEESPDGRIPKTSTSPIPTARRSVVDAFGGRKPILILAGVIGVLLLGVLL GSLPRRRGDNVHSSDEGDGNSLFDEWDGPDSH >gi|302034479|gb|GL383156.1| GENE 48 49044 - 50726 1530 560 aa, chain + ## HITS:1 COG:Cgl0828 KEGG:ns NR:ns ## COG: Cgl0828 COG0166 # Protein_GI_number: 19552078 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-phosphate isomerase # Organism: Corynebacterium glutamicum # 6 559 3 540 540 630 58.0 1e-180 MQTPIDATSTPAWGTLSGLKSRFADGPHKLRRLFDADPHRAERYTFDVADLHVDLSKNLL TDEIRDALLELAAQMRVTERRDAMYAGEHINVTEDRAVLHTALRRPRTDELHVDGQDPVA DVHEVLDKIYAFADKVRSGEWKGVTGKPIRTVINVGIGGSDLGPVMAYEALKPYVKDGLE CRFISNIDPTDVAVKTADLDPETTLVIIASKTFTTLETLTNARCVRAWLLDGLVAAGAIA DTEQARRDAVAKHFVAVSTALDKVEEFGIDPVNAFGFWSWVGGRYSVDSAVGTSLAVAIG PKSFEDFLAGFHAVDEHFATAEPERNVPLFMGLLNVWYTNFWDAHSHAVLPYSQYLHRFP AYLQQLTMESNGKSVRWDGSAVTTDTGEIFWGEPGTNGQHAFYQLIHQGTRVIPADFIAV ANPAHPTKDGGTDVHELFLSNFFAQTAALAFGKTADEVRAEGTDEAIVPARVFAGDRPTT SIMAPELSPKVLGELIALYEHITFVQGAVWGIDSFDQWGVELGKKLALQIAPAVSGDDDA LKAQDPSTASLVTWYREHRR >gi|302034479|gb|GL383156.1| GENE 49 51276 - 51896 413 206 aa, chain + ## HITS:1 COG:all7616 KEGG:ns NR:ns ## COG: all7616 COG2949 # Protein_GI_number: 17158752 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Nostoc sp. PCC 7120 # 16 195 39 223 228 122 38.0 6e-28 MSTCIAAFVALLGPWALAGALSYGKVHDVADTEPRDVAIVLGAQVLPSGTPSAYLRGRLD VAADLYRSGKAKVILVSGDHRETHYNEPKVMKTYLVSKGVPAARIVEDVAGLDTYDTCVR ARRIFGVDRAIMVTQDYHEIRTVATCRMTGLDAVGVPDRTQPRDNVWWYGWGREFGSRLK MIWDVVSRREPTLGQTDNGVHKALNS >gi|302034479|gb|GL383156.1| GENE 50 51963 - 52784 839 273 aa, chain - ## HITS:1 COG:BMEII1060 KEGG:ns NR:ns ## COG: BMEII1060 COG0656 # Protein_GI_number: 17989405 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Brucella melitensis # 1 269 20 290 294 287 52.0 1e-77 MSVPTITLNDGVPIPQLGFGTWKVPANEAEKAVSAALEAGFRHIDTAAIYGNEEGVGRAL ADSGLDRKDLFVTTKLWNDSHHADDARKAIETSLAKLGLDHVDLYLIHWPAPVKYGDAYI EAWNALQDFKSEGLTRSIGVSNFKTEHLDAIEGAAPSVDQIEMHPSFNQATFRAELAERG INPEAWSPLGQSKDLDNPVLTDISKATGKTPAQVVIRWHLQIGNIVFPKSVTPSRIVENF DVFDFELSDEQIAAIDGLDHGNRLGGDPSTADF >gi|302034479|gb|GL383156.1| GENE 51 52919 - 54589 1608 556 aa, chain + ## HITS:1 COG:NMB1506 KEGG:ns NR:ns ## COG: NMB1506 COG0018 # Protein_GI_number: 15677359 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Arginyl-tRNA synthetase # Organism: Neisseria meningitidis MC58 # 22 556 27 572 572 500 48.0 1e-141 MSSLPSQLAARIESAIGVDPQLRPATKPQFGHFQSNVALRLAKEEKRPPRDVAADIVAKL DIEDLCETPEIAGPGFINLRLRTDVLARVASDLVTDPNAGIAQAEKPERVVIDYSAPNVA KQMHVGHLRSTIIGDCFNRVLSAQGHTVIPQNHIGDWGTQFGMLIEYIVEKRMDVEDFDL SGVEQLYQDSKKTFDADPQFADRARRRVVKLQGGDAETLRIWRTLIDISLEGFNATYARL SVLLTDEDVAGESSYNDDLPRVVDELVADGLAVEDNGALCVFVEGQDAPMIVRKRDGGFG YDATDLAAIRRRVGKLKADRIIYVTDVRQSHHFEVLFQVARMAGFLPDDVEAEHVGYGMV LGPDGRPFKTREGGTVSLSDLLDEAETHAAPNIALAAIKYADLSNGLQKDYVFDAERMVQ TTGDTGPYLQYAHARVSQILRKAAAEANPNVDPEADLDAMDWGRISVLDEPAEQQLALLL SRFGEIVEVVATDLTPHKLCTYLYELAGAYSVFYEQCPVLRSTGEVRGSRLALCAATRRV LGRGLDLLGIDAPDRM >gi|302034479|gb|GL383156.1| GENE 52 55118 - 56143 719 341 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5187 NR:ns ## KEGG: HMPREF0675_5187 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 327 1 327 442 441 99.0 1e-122 MRRSRIAVAAATATALVGSIAAITPPPQAEASSNRPRSVAQAAIATDGKGIINKDCRDAV INDAKLRAAIAGALVKAGFSSADAVALAPRIAREMAKEGVLLINHHKLKALIGAQVGLLT DAKIQRAAAAVDLGIKATLAATIIPNALHSAAFKDAVVANLVAAGVDKKLAKATAVAIAA TALNPALGPIAKTEAIKAEIGAQAALLVSRGVHLKKAAIEHIIGRSFDAAVATAIVSSPI LNARIVTHLVRAGIDKSLAVQIAPRIIDRLAKEPLLALNTAKLMKNITRQIVDVITADKA IKTAEQLEKELPALDDLVKKACSCPKPTPTPTPTPTPTPAS >gi|302034479|gb|GL383156.1| GENE 53 57157 - 57279 204 40 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|213961087|ref|ZP_03389367.1| ribosomal protein L36 [Propionibacterium acnes SK137] # 1 40 1 40 40 83 100 7e-15 MKVRNSLRSLKNQPGSQVVRRHGRVYVINKKNPRLKTRQG >gi|302034479|gb|GL383156.1| GENE 54 57330 - 57941 538 203 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5183 NR:ns ## KEGG: HMPREF0675_5183 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 203 1 203 203 375 99.0 1e-103 MTKQEFILTFISVAIFLVLLVPTLIYKIRRERKLPTGEPVPVTQGQRFMALLGDAMWVGL LTLAGWGLFSGATLGYEFNHVDQKSAIEQAIHPAGSALLLGINVGYVLISLVGRLGVSPG TNSRQLAWVDSTGRPAGRGHTFVIGLAFILSILGKTSVGVFASIGGTILFIEAVSVLTTK RGIIGKLMHVNLVDARCITPQPC >gi|302034479|gb|GL383156.1| GENE 55 58115 - 59044 757 309 aa, chain - ## HITS:1 COG:MT2776 KEGG:ns NR:ns ## COG: MT2776 COG1940 # Protein_GI_number: 15842240 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Mycobacterium tuberculosis CDC1551 # 27 281 6 256 265 217 47.0 2e-56 MDAQVFAVGQMDPPVPPVAGNCHPSLPRTNHLPLRLSTMNKVLGIDVGGSGIKGAPVDLE VGDFAEPRLRIPTPEKSSPENIVTVLREIVDNFAPTIGDGPVGISFPAPARHGVIPFIAN LDQGWAGLHAEKYISDALGRPVTVLNDADAAGVGEVHYGAARGVPGVVVLTTLGTGIGSA VINNGILLPNTELGHLEIDGHDAEKRAASSVKDRKHMSYKDWATKRLQRYYEVVEMLFSP DLFVVGGGISKDHKKFFKYLKLETPMVPAQLLNRAGIIGAAWQAQWRLEHPDATEEEVVK AAKKAKDAD >gi|302034479|gb|GL383156.1| GENE 56 59357 - 59569 57 70 aa, chain - ## HITS:1 COG:no KEGG:PPA2123 NR:ns ## KEGG: PPA2123 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 70 1 70 70 100 97.0 2e-20 MIEQRASEARGGEEVVEQRPHWATPLVRGWMIIAAAAVAAAWDVTYQDDGTWRNQVVRSR TINGTVADRR >gi|302034479|gb|GL383156.1| GENE 57 59967 - 60953 1130 328 aa, chain - ## HITS:1 COG:CT828 KEGG:ns NR:ns ## COG: CT828 COG0208 # Protein_GI_number: 15605563 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, beta subunit # Organism: Chlamydia trachomatis # 13 325 31 345 346 230 36.0 3e-60 MILGSGIQEGLLLKPVTYSWAYDLYNQAVANTWFPNEIQLDEDLADFARMTPDEHHALTH LMSYFNPNELLVNKALAFGVYPYVNAAECHLYLAKQMWEEANHCMAFEYVLETFPIDRDE AYRSHIHVPSMARKEAFEVAFIKRMTEQTLDITTVEGTQDFVRNLIAYNIILEGIWFYSG FMVALSFRQRNLLRNFGSLIDWVVRDESLHLKFGMNLILTVLEENPEIATDEFAAEIHDM IVQGVEMEEQYNRDMLPRGILGMNADYVNDYVKYLADRRLEELGFEPEYRVANPAKWMAT ANDTLQVVNFFEATNTSYEVNAHATGSR >gi|302034479|gb|GL383156.1| GENE 58 60988 - 63558 1985 856 aa, chain - ## HITS:1 COG:VNG2384G KEGG:ns NR:ns ## COG: VNG2384G COG0209 # Protein_GI_number: 15791174 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, alpha subunit # Organism: Halobacterium sp. NRC-1 # 39 791 28 771 804 557 42.0 1e-158 MSADPISTIRVRKRDGSLAPYDGNEVAASIMDSARGLDDAVARATLLQAEVEITLFDGMT TDALDEAVIQVALGNAKDDPAFDTIASRIAVKKLYKEVFGDTHDDLGDVDPERVQDLHRN YFPRTIAKLVADGHLDERLGRDFDLETLAAALDPTRDDLIGFMGVRTMINRYLLRTPDKQ ALEVPQYFWMRVAMGLSLTEDDPTSSALALYDSMSNLRHLAAGSTLVNAGTPSAQLSNCF VMRTEDNLEHIAQTIRDVMWITKGTGGIGLSMSDLRCEGSPIRSDNTASTGPIPFIHTFD STLRAVSRGGKKLGALCFYLENWHMDFPQFLDLRQNSGDPYRRTRTADTAVWISDEFMKR VAKDEDWYLFDPAETPDLTEITGSDFSKRYAQYVEQAEAGKIKRFRRTTAREQFRAILVS LQTTSHPWLTWKDSINTRALNSNTGTIHSSNLCTEICLPQDRDHTAVCNLASVNLAAHLA GPRGKRRLDWDQLAATTRLAVRHLDNLVDITASAVPQAQRSNEENRAIGLGVMGLTDMLE QIRVPYDSPDACEIVDRVVEFISWHAIDTSADLAAERGAYPMFEGSGWSRGMVPVDTLAV LERDRGIPVDVDRTTRMDWDALRAKVRTGMRNATLMAIAPTASIGLIAGTTPGLDPQFSQ MFSRTTSAGKFLEVNRNLVADLKDLGLWETIREELLRRQGDPSEIEAIPAPLRRLYRTSF TLDPMAYLNVAARAQKWVDQAISRNIYLASRSVGDMEDLYTAAWRMGVKTTYYLHMLPRH TAEQSTVAVNKAAGRRNGPRRGFATAVRRASGAATIRKPVTETLNASVEPVVSLDLIDGA SCPVDPQERQQCESCQ >gi|302034479|gb|GL383156.1| GENE 59 63515 - 63706 97 63 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSPKTCQVWSRNRGARFAISREVSQRSGGPLSLPHSARSRAHGIARRNCNERRPHFDHPR PQA >gi|302034479|gb|GL383156.1| GENE 60 64008 - 64499 455 163 aa, chain - ## HITS:1 COG:MT3580 KEGG:ns NR:ns ## COG: MT3580 COG0477 # Protein_GI_number: 15843086 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Mycobacterium tuberculosis CDC1551 # 1 155 284 438 449 166 54.0 1e-41 MAATAVNLIALFILMLGQPLGGLIGDRIGRKPVLLFFAAGGVVYTWVLVTCLSHARKPVT AFLMLLMGYIFLTGYTSISAVVKSDLFPTDVRALGVGMAHGFANSLFGGTAPLIYVWAKQ GDAIPAFIGYVTALSAVTLLTILFGLTTRTASHLDAPTKGGHD >gi|302034479|gb|GL383156.1| GENE 61 64352 - 65227 460 291 aa, chain - ## HITS:1 COG:MT3580 KEGG:ns NR:ns ## COG: MT3580 COG0477 # Protein_GI_number: 15843086 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Mycobacterium tuberculosis CDC1551 # 1 235 37 271 449 271 55.0 1e-72 MYTYTTFAAYFEDQFFSPDDPHKSIYIYAIFWATFIMRPFGSWFFGRWADRHGRRSALIM AVTIMAVGSLVISVLPTRGTIGVGAPILLLICRIVQGFATGGEYGTSATYMSEASTKGHR GFFSSFQYFTLVGGLVTAQAVLLLLSSLMSEATIHAWGWRIPFFIGGVAALIVFFMQKTM DESLSTEHLKSVRSGEDSSSGSLKELFGNHLGNFLLAFTIASGGTLCFYVYRISSIRLSA ALRWRQPRSTSSPYSSSCSGNRWEASSVTGSDANRCCSSLPPVESFIPGFS >gi|302034479|gb|GL383156.1| GENE 62 65234 - 65443 84 69 aa, chain - ## HITS:1 COG:no KEGG:PPA2119 NR:ns ## KEGG: PPA2119 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 69 13 81 81 109 100.0 3e-23 MSMTTPRRLAVSVGTYRNRHARRVDAVPPMPGDEMSDAQSTRSASVRSESDVYRAVWNTV KGSMGNLVE >gi|302034479|gb|GL383156.1| GENE 63 65534 - 66634 753 366 aa, chain - ## HITS:1 COG:PA3723 KEGG:ns NR:ns ## COG: PA3723 COG1902 # Protein_GI_number: 15598918 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Pseudomonas aeruginosa # 5 366 3 357 368 325 49.0 9e-89 MTSPLLFQPLTLRGLTVRNRAWLPPMCQYAVDSQDGIPSTWHLIHYGSFAVGGFGLIVAE ATAVSPEGRISPCDTGLWNDAQVAAWRTITDAVHELGGTIAVQLGHAGRKASTEKWWPGF HGGVVPPEKGGWIPVGPTAAPADGKQYAGSPVTALNEDGISKIIDDFRTAASRAVVAGFD AVEIHSAHGYLLHQFYSPLSNTRTDGWGSDYDGRVRLPLAVADAVRGAIPDDMPLLARLS VTDWRDDGWSVEDSIELSRRFALAGVDLVDASSGGNSSAPIPVAPGYQADLAARVRAEAD VPTATVGMIWTGELAEDLLNKGCADAVMVGRAALRDTNWPLRAAHELGVPNEEAPWHPAR FRGAWR >gi|302034479|gb|GL383156.1| GENE 64 66687 - 67076 403 129 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5173 NR:ns ## KEGG: HMPREF0675_5173 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 129 1 129 129 248 99.0 8e-65 MWQSGSRLLAMRHAMATHFRGNMSTTTWSSDAIKMPCMAVFIVETHYDPAHSEERMAARP AHLENLDVMRERGQLANAGPLADGSGAVLIYTVPDRDVLNHLLEADPYPKTAVQVTSVRE WKPNYHHHV >gi|302034479|gb|GL383156.1| GENE 65 67179 - 68372 676 397 aa, chain - ## HITS:1 COG:ML2298 KEGG:ns NR:ns ## COG: ML2298 COG0265 # Protein_GI_number: 15828230 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Mycobacterium leprae # 1 394 6 399 401 159 31.0 7e-39 MAHILDITLAVILILRALRGWTRGAISGIASLIGLIGGVWVGLWASGDIVSRITNNSSSW LATGPLRFGVVLVIVEVIHGLCNGLARRICHASETAGLGALDRIGGALLSATATALVVAV GATALAPLLPPQWTQAIDESAVINTTNRAIPPQINHEAARLIGQMADTFPKVFTGQDPRL PGDAPDDSAANSPGVRQAARSIVKVRSLSHQCDRASEGTGWVSSPHRVVTNAHVVAGSDT VTVQVGGQGARLRARVVAYDPDLDLAVLAVPKLKAPALTMTSSVDAGDSTVIAGFPLDGP YTVNAARVRGAITARGENIYGDDDVVREILSLRGTVQPGNSGGPLLTTDGKVAGTIFARS TSQPQAGYALTNRETRQLIRSGTYGSTPASTGRCSVA >gi|302034479|gb|GL383156.1| GENE 66 68506 - 69105 398 199 aa, chain + ## HITS:1 COG:Cgl2252 KEGG:ns NR:ns ## COG: Cgl2252 COG1443 # Protein_GI_number: 19553502 # Func_class: I Lipid transport and metabolism # Function: Isopentenyldiphosphate isomerase # Organism: Corynebacterium glutamicum # 19 188 6 173 189 160 50.0 1e-39 MSHHDGENVGTSADSGYDDFVILLDDDGNHIGTAPRATVHSQHTPRHLAFSCHVLDVGGR VLVTRRALTKVAWPGVWTNTCCGHPRVGETIIDAAVRRTHQELGLDLDPRRMRVVLPDFS YRATDSGGIVEDEFCPVVVARLSLPEELVELNPDPDEVEEVAWVGWQDMYGLARSMPALL SPWAVEQMLEFGPDLPVVR >gi|302034479|gb|GL383156.1| GENE 67 69112 - 69663 224 183 aa, chain - ## HITS:1 COG:AGl3520 KEGG:ns NR:ns ## COG: AGl3520 COG1446 # Protein_GI_number: 15891881 # Func_class: E Amino acid transport and metabolism # Function: Asparaginase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 2 173 138 310 330 110 41.0 2e-24 MLLCDPPERVCQDWGLEIAPPEYFVTQARREQLEQVLARRQHAPKHGTVGAVARDRYGHL AAATSTGGIVASSQGRIGDSPVIGAGTFARDGVVAVSCTGDGEAFLQGVVAHEVDAQMRL AGQPVDRAALGALTDEVSSRLTGHAPATDGLIAVDSCEQLVICHMSASMLAAWPDHGEVL TSV >gi|302034479|gb|GL383156.1| GENE 68 69564 - 70076 262 170 aa, chain - ## HITS:1 COG:PAB0145 KEGG:ns NR:ns ## COG: PAB0145 COG1446 # Protein_GI_number: 14520430 # Func_class: E Amino acid transport and metabolism # Function: Asparaginase # Organism: Pyrococcus abyssi # 30 133 4 107 305 78 44.0 5e-15 MDKPLMTSTRNQPYDPVMTSHVVDQPGPTLVIHGGAGNVPSRTGEEAEKFRRSLRQAFAA GQRALDVSACDAVIAAVTAMEDDPLFNAGRGGVLTANGTVETDAAVMTGDGHAGAVCCSR HARNPIQLAHKALRIHPMCCCVTRPNGSVKTGVLRSRRRSTSSPKRAASS >gi|302034479|gb|GL383156.1| GENE 69 70178 - 71548 808 456 aa, chain - ## HITS:1 COG:ML0175 KEGG:ns NR:ns ## COG: ML0175 COG0642 # Protein_GI_number: 15826988 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Mycobacterium leprae # 4 449 23 469 519 231 38.0 3e-60 MGRRVSLLVSTSVVVAVALTSLSARLMTRISLYSELDEQLTRMATTISPSVAADPQNLGG LEASSLAATNTTLILVRADGQVTTAPGTEVTVTAGPQELAVARTGIGVKAHTVIDSRGVP VRIVAVPFTSDGVHYALVTGQDLTGTRATLGSLWIVLVGTGFVGIVLTAIAGYVAGNSAT SPLRDLSRAVHHVTTTEDLTPIQVHSHDELGDLAVSFNHMLSSLSNSRERQKQLIADASH ELRTPLTSMRTNVELLMADQKSHMLPEEARGEILDDVAAQLGEFSSLIGDLVQLSREDAP PPRPEYFDLSDAVSKAVERGRRRGPNLEFDVHLESHLVLGDEATLERAVTNLLDNAVKFS PAGGTVTVSMEGDTVVVSDEGPGIAEADLPYIFDRFYRSDRARNTPGTGLGLSIVAHTVT SHQGWIKASRAPSGGAMFTIYLPRAEPPVEEPTVSS >gi|302034479|gb|GL383156.1| GENE 70 71605 - 72303 652 232 aa, chain - ## HITS:1 COG:MT1009 KEGG:ns NR:ns ## COG: MT1009 COG0745 # Protein_GI_number: 15840406 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Mycobacterium tuberculosis CDC1551 # 1 229 1 227 230 294 69.0 8e-80 MSMHILVVDDDRAVRESLARSLQYSGYEVDSAADGVEALAHLSGTHPDAVIMDVMMPRLD GLEATRMLRSNGNDVPILVLTARDAVDDRVDGLDAGADDYMVKPFALDELLARLRALTRR SRPEPEQNEAPEQLSFADLTLDPGTREITRGNRRISLTRTEFALLAVFLQNPEKVLERWW LLHEVWGFDFPTTANSLEVYIGYLRRKTEHDGEPRLIHTVRGVGYVLREANS >gi|302034479|gb|GL383156.1| GENE 71 72300 - 73394 895 364 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5165 NR:ns ## KEGG: HMPREF0675_5165 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 364 1 364 364 586 99.0 1e-166 MSLFLVGGGYDDSLVEVYDEFVSQARHHNADAPIALVVAGPPSESADHAAELTRIVTSRW VDANILTIHLDGPGTAPTVGDPATPLWAEDESFQLPDNLDALAGIIVDGGAVPSYINGLA PAAEQLSMLVRGGAPWLGFSAGAMAPCVTALAGGWKLQGRQVGQQTGAEGFDEVTFVEGL GLVSLTISTHNDTLSGDGLIISNVESGLLSSAVAVDEATCLRIDASTGHTEVMGRGLVRW FTREVNGVLVRSQRSVTPETAPAPHKPRFDGLAKVAAATRAAHDKEERAKAARQRAEERR RARKSKSADDETKTSEGSATPEDAPASAANPQAAADPTPTAGPEPDPLSDADPTAQPPTE DVKP >gi|302034479|gb|GL383156.1| GENE 72 73458 - 73949 384 163 aa, chain - ## HITS:1 COG:MT2293 KEGG:ns NR:ns ## COG: MT2293 COG0394 # Protein_GI_number: 15841726 # Func_class: T Signal transduction mechanisms # Function: Protein-tyrosine-phosphatase # Organism: Mycobacterium tuberculosis CDC1551 # 14 159 7 153 163 108 41.0 6e-24 MEGTPVSNQNTSSVIFVCWGNICRSPMAEFVARKVFANEGLDARITSAGVSDEEHGGPMD SRARSVLKSHGYPCSGHNAHQIDGSEIMSADLVIAAEPRHIQMMKRMAPDADNLRLIRDY DPNCTPGTSLPDPWYGSADGFEDTLDAIEAAMPGIVDEVRSLA >gi|302034479|gb|GL383156.1| GENE 73 74191 - 74484 181 97 aa, chain + ## HITS:1 COG:no KEGG:PPA2109 NR:ns ## KEGG: PPA2109 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 97 162 258 258 151 92.0 9e-36 MPVGVTSQDWATQLGLDTAAPWRTGALDVTRQATASGHFVNARCYTSETERRSVLDSGST TTTNTARTLLGNDAERLSTLHRLDAFTAVTVPERSRL >gi|302034479|gb|GL383156.1| GENE 74 74641 - 75456 877 271 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5162 NR:ns ## KEGG: HMPREF0675_5162 # Name: not_defined # Def: CAMP factor (Cfa) # Organism: P.acnes_SK137 # Pathway: not_defined # 1 271 1 271 271 434 100.0 1e-120 MKRSALIIPILTGAVLAPVAPAVAVAAPAPVSQSAARQHAQVDAEQALAQVNARIAELHK MPQAQVPASEAPKVNYGEEIRKLLDTAFELRTAIESIIAGKVPPVDLSTIPARVDLLTTS VKTIQQANHNLVNKVEAAHVELGFSITRALIRTINPTSTAAQLAESKADVLSTYAKVAAY RDLKPTDAATVYVKNGLNTKIWQTRINRDKYLLGKNAEGYKAINKALTHATGVWFNPATT VKQVDDEVKALDLAFQATLDRGPADGKLRTN >gi|302034479|gb|GL383156.1| GENE 75 75726 - 76163 301 145 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5161 NR:ns ## KEGG: HMPREF0675_5161 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 145 1 145 145 233 100.0 2e-60 MTDVQRRVVITEGINVEGVKLALIAVPRPDRVAGTPSAKPPTVTNLPTAGVVSAMGLYLL TASNVLTLVGGVAASCLFLILAVSLAVVVVRFNALLTPHAHALQVTLEWLTVLVALILGI TRQWTRIYRVYVNGKTERFHHALTD >gi|302034479|gb|GL383156.1| GENE 76 76402 - 76659 132 85 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGAGGGAARCIPRHEKDRPTPRGRAGRKSVWETYRSVLKTLEGLAQGDRDLRRGTALVEV QPRHPVAWVGGDVGAGRLHVVPVGR >gi|302034479|gb|GL383156.1| GENE 77 76531 - 78033 1130 500 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5160 NR:ns ## KEGG: HMPREF0675_5160 # Name: not_defined # Def: cellulase (glycosyl hydrolase family 5) # Organism: P.acnes_SK137 # Pathway: not_defined # 1 500 1 500 500 978 100.0 0 MRRKSALGFVALSLFATGMGVATAVPATASPEDTAAPVRVDASRWTTQGRWVTDAQHRVV ITQGINEVAKSAPYAPDAVGFGEDDAAFLEAQGFTSVRLGVLWAGVEPRPGVYDDAYLAR VERTVRILNAHGIASVLDFHQDMVNEKYQGEGWPAWAALDHGMPNIVKTGFPGNYFLNEA VKYSFDSFYDNAKASDGIGVADHYASAWRHVAEHFRNVPGVQGYDLFNEPFPGHRYTRCL TQLGCRAADARLSAVQQKTVDAIRSVDKATTVWYEPMQFFNIGVGTNVRLTGSNLGLSFH DYCTSQATLHSYVGCTAPDNRVFTNAEKHSRQTGSGLMLTEFGAITTPAVITSQMDLAAR NRVGVQWWAYTAGDPTTAGPGTEQALVDDPARPPQGTNVESAKLALIAVPHPDRVAGTPS AYHHDRSRRVFTMTWTAQRPDGSSAEESDETTVVVPAISAPHGYDVQASGAHVTSHPGDR VARLHLNQGSTTAKVTITLR >gi|302034479|gb|GL383156.1| GENE 78 78627 - 79646 720 339 aa, chain + ## HITS:1 COG:Cgl0080 KEGG:ns NR:ns ## COG: Cgl0080 COG1075 # Protein_GI_number: 19551330 # Func_class: R General function prediction only # Function: Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold # Organism: Corynebacterium glutamicum # 71 310 70 308 324 102 30.0 1e-21 MKINARFAVMAASVAVLMAAAPTAQAVTSPGDIHPLVQAAHSPDGIPGNGVGPEFHTSSM ARSYSEKHLGVAPRGVNDFSCKVKPGDRPVILIPGTGGNAFATWSFYGPHLAHEGYCVYT FTTNVPVGILDEGWGFTGDVRASAQALGAFVDRVRKATGSEKVDVVGHSQGGGILPNAYI KMYGGASKVDKLIGLVAANHGTTAVGLYKLVDGLPEAVKDFLSTWSYDHNMEAYGQQLKG SALMQQVYRDGDTVPGIAYTVISTRLDTTVTPYTQAFLKGAKNMTVQDACPLDAYGHGRL PYDPVAYQMVLNALDPNHPREISCTWRPRVLPVSTTDAA >gi|302034479|gb|GL383156.1| GENE 79 79824 - 80132 206 102 aa, chain - ## HITS:1 COG:mlr5757 KEGG:ns NR:ns ## COG: mlr5757 COG2801 # Protein_GI_number: 13474791 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Mesorhizobium loti # 1 94 158 251 263 92 47.0 1e-19 MERVLSDNGGVYRSHLWRNTCNELGIKHKRTRPYRPQTNSKIELFHRTLADGWAYARCYI SEAERRGKLGDWLHYYNHHRPHPACGNQPPFSRLTNIPGQFT >gi|302034479|gb|GL383156.1| GENE 80 80181 - 80543 279 120 aa, chain - ## HITS:1 COG:SMc02901 KEGG:ns NR:ns ## COG: SMc02901 COG0346 # Protein_GI_number: 15963979 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Sinorhizobium meliloti # 1 120 1 121 122 58 31.0 3e-09 MSAPNLFLTYVSDAKRSTAFYSDLFDIEPNFTSPRYVAFEVTPGVLFAIWTGQRGHHPRH APHERDRTHGPRSSAAVDDAYREGVAKGVHVIEEPHDDVFGRTFVIANPDGNLIRVSPVD >gi|302034479|gb|GL383156.1| GENE 81 81007 - 81195 73 62 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|327448553|gb|EGE95207.1| ## NR: gi|327448553|gb|EGE95207.1| hypothetical protein HMPREF9570_00111 [Propionibacterium acnes HL043PA1] hypothetical protein HMPREF9581_00140 [Propionibacterium acnes HL087PA3] # 1 62 1 62 62 99 100.0 1e-19 MRGVPIDVGHEIPGASLVHEPVRVRGEPLPAGFSAPSVAQADATSLSRCGQQAEFLSGRE PP >gi|302034479|gb|GL383156.1| GENE 82 81383 - 81586 233 67 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5155 NR:ns ## KEGG: HMPREF0675_5155 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 67 32 98 98 128 100.0 7e-29 MANVTYTEDAWTLITVRYPDVESVRQLLYLGDHIRILNPAEAVEQFHDLAAQIMRAHSTN SSTNVSG >gi|302034479|gb|GL383156.1| GENE 83 81633 - 81845 58 70 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313763741|gb|EFS35105.1| ## NR: gi|313763741|gb|EFS35105.1| hypothetical protein HMPREF9567_01930 [Propionibacterium acnes HL013PA1] hypothetical protein HMPREF9612_00053 [Propionibacterium acnes HL063PA2] hypothetical protein HMPREF9616_00938 [Propionibacterium acnes HL007PA1] hypothetical protein HMPREF9598_00620 [Propionibacterium acnes HL050PA1] hypothetical protein HMPREF9600_01021 [Propionibacterium acnes HL050PA3] hypothetical protein HMPREF9566_00136 [Propionibacterium acnes HL045PA1] hypothetical protein HMPREF9594_01288 [Propionibacterium acnes HL005PA1] hypothetical protein HMPREF9610_01285 [Propionibacterium acnes HL027PA2] hypothetical protein HMPREF9601_02531 [Propionibacterium acnes HL030PA1] hypothetical protein HMPREF9602_02324 [Propionibacterium acnes HL030PA2] hypothetical protein HMPREF9570_00109 [Propionibacterium acnes HL043PA1] hypothetical protein HMPREF9586_00116 [Propionibacterium acnes HL083PA2] hypothetical protein HMPREF9579_00110 [Propionibacterium acnes HL087PA1] hypothetical protein HMPREF9588_01187 [Propionibacterium acnes HL025PA2] # 1 70 13 82 82 94 100.0 2e-18 MRWSSAARFSSAVDISKVLSRSAFPSVAINLLSRILHGLAGHPPAQRRRRSAALGTPGLS PRAPSACRRG >gi|302034479|gb|GL383156.1| GENE 84 81863 - 82138 155 91 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5153 NR:ns ## KEGG: HMPREF0675_5153 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 91 1 91 91 167 100.0 1e-40 MGPTAACPPSSPHRHRCHAAACHGLATGPHLLASLFFVSPLVKWFSAESSRTFRKVRNAS AQVIIQLSETMTGIEAVQAYYREPRNQEIFT >gi|302034479|gb|GL383156.1| GENE 85 82385 - 82630 179 81 aa, chain + ## HITS:1 COG:PA4997 KEGG:ns NR:ns ## COG: PA4997 COG1132 # Protein_GI_number: 15600190 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Pseudomonas aeruginosa # 1 61 533 593 603 62 50.0 2e-10 MQRALGTIPADRTAVIITHRLSTVEIADWVLVLEHSQILENGSPAELEAQGGRYVGLHKP GRSHLPDGDVSEAHPESRRRD >gi|302034479|gb|GL383156.1| GENE 86 82844 - 83179 303 111 aa, chain - ## HITS:1 COG:no KEGG:PPA2097 NR:ns ## KEGG: PPA2097 # Name: not_defined # Def: 5'-nucleotidase/2',3'-cyclic phosphodiesterase or related esterase # Organism: P.acnes # Pathway: not_defined # 1 111 593 703 703 187 98.0 9e-47 MKAQIVQDDKTVDVATTPVKDGWSSVSVKVPTAKGLVSGEATTVFTFPDSGTTVRFAAKL SVPSGDHPGGAVIPAPKPGQSGTPGHDVNLGTPGSDKGSSNGKPGLPKTGV >gi|302034479|gb|GL383156.1| GENE 87 83191 - 83628 372 145 aa, chain - ## HITS:1 COG:Cgl0328 KEGG:ns NR:ns ## COG: Cgl0328 COG0737 # Protein_GI_number: 19551578 # Func_class: F Nucleotide transport and metabolism # Function: 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases # Organism: Corynebacterium glutamicum # 8 106 436 530 694 83 44.0 2e-16 MATRRDGEVPSRPYLQLGVSSNVTYTYDESRKEGERITSVWVNGKPIDPKGTYSVGSGSF LIAGRDNFTELAKGSKPVDSGKINLSAWVDWIKARKTLKPDFAKRAVSLTTSLHEGTSRD TTFTLGKPADKAVAPTPWISPPRML >gi|302034479|gb|GL383156.1| GENE 88 83502 - 83837 184 111 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5150 NR:ns ## KEGG: HMPREF0675_5150 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 4 111 1 108 108 195 100.0 6e-49 MTNMVADMFKDTLGKDDPNFIGLQNPGGTRASLLDKDITYKQAAQVLPFANTLTTTRITG AQFKKVLEQQWQRAGTARSRHVHTCSSACPRTSPTPTMSPARRANASPPCG >gi|302034479|gb|GL383156.1| GENE 89 83871 - 84953 1071 360 aa, chain - ## HITS:1 COG:Cgl0328 KEGG:ns NR:ns ## COG: Cgl0328 COG0737 # Protein_GI_number: 19551578 # Func_class: F Nucleotide transport and metabolism # Function: 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases # Organism: Corynebacterium glutamicum # 50 307 36 297 694 134 38.0 3e-31 MNHRRRARIIGLSVLCMAAGSFVAKPDFAAPSTSGTSSAPVASCNGDKNVDIFNFNDFHG RIATGANLFTPVVEARNANGADKVLLLDAGDNVGGSTFESGSLNDEPTIDVLNAAGVDAN AVGNHEFDKGWKDLAERIVPHLNSPYLGANVYEKGTTKVAAPLKASTIIVKDGVRIGVVG AVTHDLPSLVSPAGISNLTIGDPVKAVNAEAKRLKSEGLADVVVAEYHEGAADGSGDAAS QGGNFAPVYADTSTDVDVVFNGHTHQVYSWKDKAGAPLLQAGSYGQHLAKVNVAWNSQQK KLCSTGASFIDPATTPADDPTIAKISSIYDDAKAKSDKAGTTVIGHETAPITTPSNTSDQ >gi|302034479|gb|GL383156.1| GENE 90 85223 - 86503 960 426 aa, chain - ## HITS:1 COG:APE1655 KEGG:ns NR:ns ## COG: APE1655 COG0535 # Protein_GI_number: 14601539 # Func_class: R General function prediction only # Function: Predicted Fe-S oxidoreductases # Organism: Aeropyrum pernix # 45 416 10 382 403 307 43.0 3e-83 MTITEHPDHLTRPGSAPTGHPGGHPGGHPGHSPLVREIKHDLNNKPFIVIWEVTRACALV CQHCRAEAQHHAAPGQLTNAQGHELIDQLTSYERPYPMLILTGGDCFERPDLVDLIEYAV SKGLHVSISPSVTPLFTRDRVRAVQEAGVSMMSMSLDGGSATTHDAFRGFPGTFDHTVEA CHMLRELGMKFQLNTVFTAKNIHEAPQMLKNAIDLGAMMFYTFMLVPTGRGAQLDMLSPL EREDVLYWLHDNSTRIAIKTTEAPQYRRIAFQRDAVRQGKERPVRHGELYEWLTRETNEL LGETITEPRPPRTPLAINSGSGFAFIDHTGDVYPSGFLPIHCGSIKETPFPEIYCGSPVF QGLRNPNGFSGKCGACNFNHFCGGSRSTAYALTGDYLASDPSCAYVPPGYDGELPEGVPA EGIPQI >gi|302034479|gb|GL383156.1| GENE 91 86503 - 87873 651 456 aa, chain - ## HITS:1 COG:SA1650 KEGG:ns NR:ns ## COG: SA1650 COG1232 # Protein_GI_number: 15927406 # Func_class: H Coenzyme transport and metabolism # Function: Protoporphyrinogen oxidase # Organism: Staphylococcus aureus N315 # 1 453 5 465 466 145 26.0 2e-34 MAVIGAGMTGLAAAHHLHSHGCRPVVLEAGQGVGGQVRSRRLGSDVVDMGPEAVPLRAPG VAALVAELGLTDSMRHPVPGRVLLSSRRGVVEMPSGVTPVGPTKFLPTIASRILSPAGLL RAGLEPFNAHPHLDDVSVGQFIAERFGDEVSRAVVDPLLGGIHAADLNTFSLAVAAPALE QTVRNGDSIVAGTLKRNAAGRWSQLRHHSQRSGPRTPATATWKHGLMMLPEALARELTIH TNTRARGIRQVGHEWVVDVTGPHGVGSVAVDDVIIATPARVAGALLATACPRASELLSQC ESTTVATLVMQADLTDHPIATAQTWFIGSAWSALVRQVTNLSTTWHLAKPTFRIAMGRQR GTPIDDLSDDDLVAMSVAELRRLGLALDPHDYVIERHRGAMPQPAPGHRERMAQLAATLN GTGLHVGGAGIDGAGVGTAIAAGRRLARHITSKEEN >gi|302034479|gb|GL383156.1| GENE 92 88062 - 89207 815 381 aa, chain + ## HITS:1 COG:MT2572 KEGG:ns NR:ns ## COG: MT2572 COG1071 # Protein_GI_number: 15842025 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit # Organism: Mycobacterium tuberculosis CDC1551 # 32 374 20 359 367 241 43.0 2e-63 MTETICADEGGTDPFVLPARQHPVNRPDPAMVRILDEQGRLTTHPDFPVDLVDDDLVKAL EMMVMTRRFDVEATALQRHGELGLWPPLLGQEATQAGAWLALREGDQVFPTYREQGLAHA MGVSLADILGAWDGTSHCGWDTVATHFSAYPVMIGSGTLHAVGYAMGVQRDVEAGGDPAA VLDFHGDGAMSEGDTNEAYVFAASMNAPVVFVCVNNQWAISEPTTVQSPTSLFRRATGFG IPAVQVDGNDVIAMMAVLRSALEYARSGKGPVFVEAWTYRMGAHTTTDDPTRYRTAEEES TWGKTDPIVRLRTYLQNRGIINQVWLDGLAEREDAFGAEVRAAVHENATPVMADLMADVY AEPTPDVLADAEEIASWEEDK >gi|302034479|gb|GL383156.1| GENE 93 89207 - 90211 752 334 aa, chain + ## HITS:1 COG:MT2571 KEGG:ns NR:ns ## COG: MT2571 COG0022 # Protein_GI_number: 15842024 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit # Organism: Mycobacterium tuberculosis CDC1551 # 16 332 27 345 348 337 53.0 3e-92 MSEEVLRSARPQGETTLAKALNAGLSDALAADDRVVLMGEDVGTLGGVFRITDGLKAQFG GRRVIDTPLAESGIVGTAIGMAMRGYRPCVEIQFDGFSAPAFDQIVSQLARYRARVGGRW SLPVTIRIPFGGGVGSPEHHSESPEGFYANTPGLKVVTCSNPDDAYWMLRQSIDSPDPVI FFEPKRRYYTRGHVAQTPTLGLHQARIARSGEEVTLICYGPMVDTCLEAAKEASQEGRKL EVIDVRSLSPLDMATVYESVRRTTRAIVVQEAPRTQGVGAEIAARLGEELYYVMEAPVLR VTGWSTPYPPAKAEGEHIPDVDRILDAVDRSLAF >gi|302034479|gb|GL383156.1| GENE 94 90244 - 91653 989 469 aa, chain + ## HITS:1 COG:BS_pdhC KEGG:ns NR:ns ## COG: BS_pdhC COG0508 # Protein_GI_number: 16078524 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes # Organism: Bacillus subtilis # 1 463 7 435 442 214 33.0 2e-55 MPDPGEGLTEGEVVSWRVSPGDTVKINDVLCEVETAKSIVELPSPFAGTVAKLCAEPGET VAVGEPLVTIDDGSDDQPEEEPEFLVGHLTAESGRRRRRRRGAAVSAERAPEKAPQTPTL KTGPETDVEPVPEPVQPTQPRRQDPPRMDRAGHVLAKPPARRVAADLGIDLSTVTGTGPQ GAVTRSDVKAAAEAGRQAAPEPPVVGASAGDAEFATLSVMSRRLLGGAPTEPDGHTRRVP VRGVRKVTAKAMKDSLDTKALVTAFLTCDVTPTMDLVARLRADRRFKGLRVSPLTIWCKA VCLAMGRTPVVNARWDDAADQIVFRDQINLGIAAATPRGLMVPVVRNAQDMTMLELAEEI TRIVAIAKEGKLQPTDYTDGTFSITNVGVFGLDAGTPVVNRTESAILVLGTIARRPWVVG TGDDEEVVPRWVTTMSLGFDHRLIDGEEGSTFLHDVAEILSDPASAMLY >gi|302034479|gb|GL383156.1| GENE 95 91694 - 91912 61 72 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|315109556|gb|EFT81532.1| ## NR: gi|315109556|gb|EFT81532.1| hypothetical protein HMPREF9602_02338 [Propionibacterium acnes HL030PA2] # 1 72 1 72 72 122 100.0 1e-26 MRDLISITIFSTKDATRLHSHNPYLQGSGHNITYPPLWPVNPLRPVVPVKTRGHSSSAMA RDDHTLKQPRPR >gi|302034479|gb|GL383156.1| GENE 96 91899 - 92276 225 125 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5142 NR:ns ## KEGG: HMPREF0675_5142 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 125 12 136 136 206 99.0 3e-52 MRSRKELVSTIVLGVMTVSAGMTMIAGQANASHCSLFANKPVQHGTTMSGTGGRQSCADT VGSVAVPEYHQISHWPDSRMASARRTNVKNASLTVTGHGKHGWDVYTRVDSSTGAQTKSG YTRVG >gi|302034479|gb|GL383156.1| GENE 97 92277 - 93011 270 244 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 217 1 226 245 108 31 2e-22 MIELEHISHRYRRRRSLVDISCEFDSGLWGLLGPNGAGKSTLLSILATLREPESGHFRVN GVDVSDDVNTIRSMVGFLPQRFSLPLHFRIRRAVEYAAWARGVEPRECCVRAGAALDRVG LVDRADDRVQSLSGGMRQRLGIACAIVGDPAVLLLDEPTVGLDPASRIGVRSLLGELAED RTVIVSTHLLEDLQEFVSQLAVLSEGELIFEGSYSDLESVGQKHPVRNANDAEAGYLTLL GEAA >gi|302034479|gb|GL383156.1| GENE 98 93011 - 94363 682 450 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5140 NR:ns ## KEGG: HMPREF0675_5140 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 52 450 1 399 399 728 99.0 0 MSVSPRDIRPLRGLHRVAFPFPSWYAILVTASGAVCSLIALRGSWSWGVWQVQDVTVTIR ESSMLWAIVAGLIGAGSAARMAPSDMIVGVAPARSILSIHWHWFWRQAAALLIGTVVVAA PLVVKAWINASPTAPEVADLIVVLLSFPALVAVAHLVAAMVSHPIVWVVAPVVCIAVVGI PVLVNENLFANTGYGSVAFAWSMDMAEPSGNHTATASAVTMRTIFFCIVSVSCILAASRW STVRSGGFTWRRVVPCVALVAPPLIIAALGVVMPVPLFRDAPLAFGCSSHEDVRVCVMPA HRSLALSYAQPAQRVVSVMPPTAVPHDVLLAEPGYHARSKQFVMDLGHATVYDSAQQLSD MTAQGLAQSFSGQDACTFSTEMTPQQIEAFDGVNSVERTILRLAGFQYDDAPSSERNDLD GMDVTAFRQWYTHHRQAIEGCSLTSSDLHR >gi|302034479|gb|GL383156.1| GENE 99 94360 - 95064 266 234 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5139 NR:ns ## KEGG: HMPREF0675_5139 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 5 234 1 230 230 350 99.0 3e-95 MMSIVTFLKGRHAVALVAVPVAAVVVAFFLWKTRLSVASGDVWDRPVTGLELTSLVGCAT IMWCVSSGMGWVERASIRSLEIGYGSMGLWICLCAAALPLLTGWILRSLPVELIPDGDSV LVPEMPARFQLPWSPFIGFSVTCLLCTGVALFATGVLSRKSGPLCGPLAYLIMVVAQSNT FLRFLPGGYLGQTAAVEGSVRGVSVVAVVCAAVCALLGVVGYARGLGGVKSLRP >gi|302034479|gb|GL383156.1| GENE 100 95143 - 96414 769 423 aa, chain + ## HITS:1 COG:MTH749_1 KEGG:ns NR:ns ## COG: MTH749_1 COG2966 # Protein_GI_number: 15678775 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Methanothermobacter thermautotrophicus # 23 234 15 227 247 80 28.0 9e-15 MGPGVDELDENGVRRLLAYVAAAGIAGGQPVHEVEADTRSVGRYLGCPDVQVQGWPTGVV VSLGGGTPATFESVEGTIRLDQSATTARIRQQLLDGTIGPVEALEQLRDLRSIPPRYPRL GLHGGMVCVASGIALVLQPLWPSVLFSVLAGQVTAGFIWLSGKRKALAVLTPFLAAFVVA LCAFWVARLGLIEGPLRSLLPPIAVLLPGALIVTGVAELAAGAMMAGASRLGFGTAQLAM FTAGVLGAAWLTKVPVDQLNNQIIPWRGLWVPFLGVLLLTAGMSLMESIPRYLVPWVALM LATTLTFQIIGQTVAGATWGGGLLGATVASFGSSVIEMHRPRLPRLVLFLPSFWLLVPGS LGLVSLTQLGAGTPVAGATALESTGIIGSIALGLLIGTTAARAVGLLRRSRTRRPGARRR QTF >gi|302034479|gb|GL383156.1| GENE 101 96445 - 97128 621 227 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5136 NR:ns ## KEGG: HMPREF0675_5136 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 227 1 227 227 393 99.0 1e-108 MGIGSNIGKALLAQAPDMAPGAAVSMLRSILGFAIDGASSLPGARQAAGKTLTKHDGDVE QAISSLVNQHIAMAGAQGFVSNLGGVVTLAVTIPANISGVAIVQARMVAAIAHLRGYDLD DQRVRTAILATLMGQREVDSLIHEEKLPTTPMGIATAPVGDADLEKVVARNLVNVLMGQV AGKKLPVFVSKRVPVLGGGVGATTDGFTTWSVARYARKQFPTRRPRG >gi|302034479|gb|GL383156.1| GENE 102 97438 - 97626 168 62 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|332676463|gb|AEE73279.1| ## NR: gi|332676463|gb|AEE73279.1| hypothetical protein PAZ_c21560 [Propionibacterium acnes 266] # 1 62 14 75 75 89 100.0 6e-17 MARAMAGSALTATHRPRTRGFHGAVDPRTLFLYVIVFLLGLAGGWLGIKVGRKHFQRAGL TK >gi|302034479|gb|GL383156.1| GENE 103 97623 - 98549 961 308 aa, chain + ## HITS:1 COG:YPO0771 KEGG:ns NR:ns ## COG: YPO0771 COG1132 # Protein_GI_number: 16121084 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Yersinia pestis # 47 273 24 251 590 89 24.0 1e-17 MSKTSTSPQVCPGAAAPEDIRDYQTKHRAGGKALSSIMKPIREYVLIARILVIASCIVAL APYVALTRLGAILLGDHVDHEALTRTANVLWMAFCLQALLYVLALVITHIADIKLRNILQ DRIIDRISKAPLAWFSSSSTGRVRKAIQDDTVQIHMLVAHAPVEQTAAVGVPLVLLVYAF VVDWRLGFLSIATFPIYALLQWVTMRDMATKTAEMDDKLADISSSSIELTEGIHVVKNVG QTGKAHRRFTRACEEFARFYWDWCGPLIKASALSLSVISVAALMAINLRFGLLMAKAGWV GVTDVPTC >gi|302034479|gb|GL383156.1| GENE 104 98595 - 99443 222 282 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 48 262 137 351 398 90 32 6e-17 MAWGYQQAGNAALRLQDVLSIEQISHPQVSVRIPDDMTVTFDDVSSSYLTPDGVIPALSH VNLTLRPGTVTALVGPSGSGKSTLATMLARFRDPDSGVVRIGGVDLKDVAQNDLYRLVSF VLQDPYMQRRSIRDVITLARPDATDDQVREAARAAHILDDIDALPKGFDTVLGDDTDFSG GQKQRLSIARAVLADAPILVLDEATAATDPDCEAEIQQALAALARGRTVLAIGHHAESVA GADVICVMENGGIAACGSSEELADQPYWARLSAGRAMEGATR >gi|302034479|gb|GL383156.1| GENE 105 99440 - 101233 186 597 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 349 571 279 507 563 76 28 9e-13 MTTTMNSRLSWAGDILLLNTFRPLLTEEGAAKFRRSLWLAGLQGTLEGVGLFAVIPTITA FVEGGSSMGLTWQGWVWVLAALAVAGAVVTYFQSTIGYLAAMDVMGKLSVRIGDQVASLP LGWFRSSFLGRLSRLLIQGLMHLGEGLAHFTAPLVRGAATTVVMMVLSWFWSWQLGLSLL ISMPAMCLIMIASRALWLRGESVVQPTEQELAARIVEFCETQPVLRAAGRAEGYEPLRNA RRANERAARKCLGLGVTANFLSGLGAQPVAVVLIVLAARMGSNGTLAPVATVAFVGVSLR YAKVLEDVVSAALSVETARKPVSEVDEILSAEVLPEPEAPSDMTAPGEVSLEDVSFGYDK EHPVVHDVTFTAPAGGLTAIVGPSGAGKTTLFRLMARFWGVDLGTVRVGGLDVRDQTTEQ LMSQLAMVFQDVYLYDSTLAENIRIGAPDATDEQVWKAGSLAGVDEIAARLPGGWDASVG EGGRRLSGGERQRVPVARALLKRAPILLFDEATSALDPEDEAHVEAALAQLRESSTILVI AHKLDTIRSADRIVVIDRNGRVCQVGTHDDLIASGGVYADLWHARERAEGWSLVGRE >gi|302034479|gb|GL383156.1| GENE 106 101230 - 101874 560 214 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5132 NR:ns ## KEGG: HMPREF0675_5132 # Name: not_defined # Def: transcriptional regulator, TetR family # Organism: P.acnes_SK137 # Pathway: not_defined # 1 214 8 221 221 398 100.0 1e-110 MISKRPGRKPAFTRRQAIDAALAEGIETFTLRAVADRLGVKATALYREFSSRQELQLAAI AEIAVDIEPDPDFSNWQDALRQVVDRQWALCERYPEAPLVLMAQPEAFGAAMPRIAAIVQ RLAELGVPGGVEGAAFAFDFVGDTTLETFVSIQPYLTADEGGRTGVERIGEMTAGHPDVF GVQSMGERGNLDLKVEFIIAGMELGLFPGSVAQK >gi|302034479|gb|GL383156.1| GENE 107 102186 - 102662 586 158 aa, chain - ## HITS:1 COG:BS_yrkC KEGG:ns NR:ns ## COG: BS_yrkC COG0662 # Protein_GI_number: 16079709 # Func_class: G Carbohydrate transport and metabolism # Function: Mannose-6-phosphate isomerase # Organism: Bacillus subtilis # 3 131 53 181 186 151 54.0 5e-37 MKINDNGPKPNAFDIETATKENTNYRTTAWTGKYLQVTLMSIPVGESIGLEAHPDTDQFL RLDSGKGRCVMGPAEDQLDFQQDVSDGWSAQVPAGTWHDVINTGDEPMQVYAIYAPVHHT PGIVQETAAKAEEDEKSGADVPPEWSVQPDKTADDLHA >gi|302034479|gb|GL383156.1| GENE 108 102871 - 103032 73 53 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5130 NR:ns ## KEGG: HMPREF0675_5130 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 53 1 53 53 102 100.0 4e-21 MSAHFDMEIHDDEFQSGVPADKQPTVSDVLSTWRERYKRPPGRSLGAVIMARG >gi|302034479|gb|GL383156.1| GENE 109 103029 - 103445 368 138 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5129 NR:ns ## KEGG: HMPREF0675_5129 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 138 12 149 149 216 100.0 2e-55 MTIEEKEPSRAERILAGTVAFTICMAVVFAIVAIFIGWRWSLRMFVGVLLIGIPGEILLE LVGENRMFPRGGGKPGQTRAARLLILTLILAAWALIVLALTALIQPWYGAVGEIAWVMVI GILAILIQGIRDTRKKKS >gi|302034479|gb|GL383156.1| GENE 110 103570 - 103785 80 71 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5128 NR:ns ## KEGG: HMPREF0675_5128 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 30 71 1 42 42 78 100.0 8e-14 MSCPLIVQRVCATHFTVPWCRPARILEGIMLDWVDLIIRIGVGVGPGTLIEIGADGFGAT DPPYPPYGHVS >gi|302034479|gb|GL383156.1| GENE 111 103744 - 104862 680 372 aa, chain + ## HITS:1 COG:MT3500 KEGG:ns NR:ns ## COG: MT3500 COG1957 # Protein_GI_number: 15842986 # Func_class: F Nucleotide transport and metabolism # Function: Inosine-uridine nucleoside N-ribohydrolase # Organism: Mycobacterium tuberculosis CDC1551 # 61 364 4 298 308 209 42.0 9e-54 MCGTYPLDNEGAGHADVRVLEQRRSDQPEQPQQKVRWDDSTIGGAVEGLYSDAMPTRFLP VLLDCDPGIDDAFALAYLASRDDVETVGVVTTAGNVGQDDVLRNALGLTELLGMDAPVAR GADAPLVEPVMTAEETHGPHGLGHAQLGDCGRHPDGRSGAQLWVDLARKYPGELVGIVTG PLTNLALALREEPDLPQLLRGLHVMGGAINHRGNTGPTSEWNIAVDPEAGHEVFEAWGKA SKRVVLGALQATEVIRLDERDRRAVKELGEHPVVKVLADALRFYFEFHEADGLGWCAYLH DPLVVANAVTGRFATTRPLAVDVELTGTLTRGQTVGDELGRWGKEPNVDLLCEVDAEGFI EHLLTTLRTGLG >gi|302034479|gb|GL383156.1| GENE 112 105113 - 105277 151 54 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5126 NR:ns ## KEGG: HMPREF0675_5126 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 3 54 1 52 52 90 100.0 2e-17 MHMVLSASATTGSGVQDTGIKFRRFNPSTEMLQSHKLGQELVIKYQLLMTILGF >gi|302034479|gb|GL383156.1| GENE 113 105307 - 105534 184 75 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5125 NR:ns ## KEGG: HMPREF0675_5125 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 75 1 75 75 103 100.0 2e-21 MATIQIRNVPEETSRELKARAALQGKSLSEYTLEVLQNTLKNPSREQLMQRIMAQTARTD LPPMVEVLQEGREGR >gi|302034479|gb|GL383156.1| GENE 114 105531 - 105920 300 129 aa, chain + ## HITS:1 COG:MT1761 KEGG:ns NR:ns ## COG: MT1761 COG4113 # Protein_GI_number: 15841182 # Func_class: R General function prediction only # Function: Predicted nucleic acid-binding protein, contains PIN domain # Organism: Mycobacterium tuberculosis CDC1551 # 3 117 2 116 129 68 33.0 3e-12 MTLVVDASVLAEMLVGSTVGHAAWQQWGGEEFIAPQHLPAEIAHVVRNLSLGHLITDAEA MRILSDFRAFKVELYPVEPLMVDAWEMRHNVSAYDALYVVLARLLGACLLTCDRRLAVAA PDVAVVPTT >gi|302034479|gb|GL383156.1| GENE 115 106031 - 106285 117 84 aa, chain + ## HITS:1 COG:no KEGG:PPA2072 NR:ns ## KEGG: PPA2072 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 84 1 84 84 144 88.0 1e-33 MDAFETLVRLFYEGVRCDEVLWPMYGPDDLEEGIVAQPLSWPASGLLVSPATSSRRRARL RCWLWSGRRESNPRIQLGKLALYH >gi|302034479|gb|GL383156.1| GENE 116 106358 - 106969 255 203 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5121 NR:ns ## KEGG: HMPREF0675_5121 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 203 1 203 203 301 99.0 1e-80 MTEQSTHPKPRHAEPEDVSPSAPPRASAETIATLPPPEVPEAQAASSAKVGRIAAGLYLA AAVAAAAALLIAWWQSIHMQTFIQATNLMTWTHPRPGSLASVLLATAMMSIAAAMVAMPG ILAVNTWLGRRWVRWGAIGGVAVGCAAVTLNWVSWIGMPFLIAAGLMVWLPPVRRWMDSL RPVTHEAERPTFPMRYGRVPQHY >gi|302034479|gb|GL383156.1| GENE 117 107039 - 107239 127 66 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MCRLEGGVDNVKDPDVTSGDTGGGFQGGQWIHSHGPTTFGVFSFEAQSLRPHIRIKNGLW RSKLTR >gi|302034479|gb|GL383156.1| GENE 118 107144 - 107530 297 128 aa, chain + ## HITS:1 COG:no KEGG:PPA2054 NR:ns ## KEGG: PPA2054 # Name: not_defined # Def: amidase # Organism: P.acnes # Pathway: not_defined # 1 128 1 128 466 235 100.0 3e-61 MDPLTALETSTRIAAGDVGILDIVDAALEAAHADECHAWTWIDDTGARNTARKLQRQLDA GQARPGPLFGVPCPVKDLNALAGAPRAVGSRAVGGTPSDHDDGIVTRLKAAGAIPIGTTA APEFGLPC >gi|302034479|gb|GL383156.1| GENE 119 107582 - 107899 177 105 aa, chain + ## HITS:1 COG:sll0828 KEGG:ns NR:ns ## COG: sll0828 COG0154 # Protein_GI_number: 16331726 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases # Organism: Synechocystis # 18 97 209 288 506 92 60.0 1e-19 MAGGSSGGAAAAVGAGQVPIAQGSDGGGSIRIPASCCGVVGLKPSRGRVSAGPYGIDGPG LVCGGVLTRTVRDTAAALDVLSGPWPGGPLLRPDPDRDLLVGLWP >gi|302034479|gb|GL383156.1| GENE 120 108137 - 108544 198 135 aa, chain + ## HITS:1 COG:Cgl2837 KEGG:ns NR:ns ## COG: Cgl2837 COG0154 # Protein_GI_number: 19554087 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases # Organism: Corynebacterium glutamicum # 1 125 262 375 379 63 32.0 1e-10 MSRWLRAGGRRRSGVELAEALAGIQMVARQVGQHWQRFDVIVSPTLAQPPLPVGALRDDE DPAADFDAQCRFTPWTSLWNITGRPAMSLPLHNTRIDGVELPIGIMIGGRLYDEATLLAL GCALENTRDCERSCR >gi|302034479|gb|GL383156.1| GENE 121 108759 - 110273 1556 504 aa, chain - ## HITS:1 COG:Cgl2515 KEGG:ns NR:ns ## COG: Cgl2515 COG0427 # Protein_GI_number: 19553765 # Func_class: C Energy production and conversion # Function: Acetyl-CoA hydrolase # Organism: Corynebacterium glutamicum # 1 502 1 501 502 641 62.0 0 MSERIANAALRQKVMSADDAAALIHDGDQIGFGGFTGSGYPKELPGALTKRIQESHGRGE KFTVNVFTGASTAPELDGALASVDGIGWRMPYQSDPQMRSKINDGTSFYTDIHLSESGMM VRQGFFGKVDFAVIEATRITADGDVVLTSSVGNNAVYCDTAEKVIIEVNSWQSEDLEGMH DIYGGFALPPNRVPIPITHPGDRIGDKFLHIPQNKIVAIIETAGPDRNPPFKPIDDDSRK IAGFLLDFYDNEVKQGRIPKNLLPLQSGVGNIPNAVLDGLLHSDLEHLTSYTEVIQDGMI DLIDAGKLDVASATAFSLSPDYAHKMNENAAFYRDHIILRPQEISNHPEVIRRLGVIGAN GMIEADIYGNVNSTHVMGSRMMNGIGGSGDFTRNAYISAFVSPSTAKGGAISAIVPMVSH VDHTEHDGMVIITEQGIADLRGLAPRQRAPKIIENCAHPDYRPMLLDYYERALRDCKFKH TPHLLGEAYSWHTRFLETGTMKKD >gi|302034479|gb|GL383156.1| GENE 122 110551 - 111345 414 264 aa, chain - ## HITS:1 COG:PA5422 KEGG:ns NR:ns ## COG: PA5422 COG0676 # Protein_GI_number: 15600615 # Func_class: G Carbohydrate transport and metabolism # Function: Uncharacterized enzymes related to aldose 1-epimerase # Organism: Pseudomonas aeruginosa # 8 264 36 315 318 106 28.0 4e-23 MSTLPGTLHSAHNGTWQVAEHGCQVLAWQADDKPVIWFDAEHADESEAVIRGGIPLCAPW FGHGPNNDQDPQHGLARRTDFEVTVADPFRVVGVAETPSIGIRHEVVMTNTALEMTLTLT NHDQKPRVVEGMWHTYLRVADAAQARVRGVRGASWHNFATGDKGSFDANELAVAPDTDTV IQGVGPALALLDSAWGRQIHVETTGCPSAVVWNPRSSSTHADNPTAQAWRDFVCVETGAC KDNAVIVAPHSDLTMSTRISVETL >gi|302034479|gb|GL383156.1| GENE 123 111363 - 112220 784 285 aa, chain - ## HITS:1 COG:Rv3042c_2 KEGG:ns NR:ns ## COG: Rv3042c_2 COG0560 # Protein_GI_number: 15610179 # Func_class: E Amino acid transport and metabolism # Function: Phosphoserine phosphatase # Organism: Mycobacterium tuberculosis H37Rv # 80 279 5 204 233 165 49.0 1e-40 MNSRVILVSDDRSSLRSPDTLLWPDAACMRGIHTGEWTAHIFEYAMSFEGNMTQVRELAA ANGVGVLHPHGALATDPPGLIVCDVDSTVTRTEAIDLLAECAGNADEVREITARAMVGEL DFTQSLYARVRCLEGLHIGALEEAWKATVITPGTAELVAAAHDVGAAVGLVSGGFTAIVD PLAEQIRADFAASNELEIVDNHLTGRVVGDIIDRAAKATWLRRWASERGVALERTIALGD GANDLDMFAIAGLPIAFCAKPVAVEAARNTIRCERIDTVRAVWAH >gi|302034479|gb|GL383156.1| GENE 124 112300 - 113304 681 334 aa, chain - ## HITS:1 COG:PA4617 KEGG:ns NR:ns ## COG: PA4617 COG2813 # Protein_GI_number: 15599813 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S RNA G1207 methylase RsmC # Organism: Pseudomonas aeruginosa # 55 330 95 371 374 123 32.0 4e-28 MDAATRDPVDELIAAESPHANSVWVLGRPSLMHMAEGRVAAWADDCRDLADIPEAIRLNP LTAGDVSDSPVVWMGLPASLDELDELLGTLWRILGPDAHVVAGGRIKHMSRSMNDVAARW FNEVHASLGVRKARVLHFSSPRQRPAITGTWPRTNTVNGLTIRAHGGVFHTAGVDAGTSL LLDYLDAIAADVHSDAVDLGCGNGVISAHLARLLPQATIHATDVSWQAIDSTHLTAQANQ LDIVTHWCDGLVDIPNESVDVVVTNPPFHRGTAQDHAPTLAMLADAARVLRPGGTLWCVY NNHLPWASHVQRTVGPTHQVVRNRRYTVIRTVRR >gi|302034479|gb|GL383156.1| GENE 125 113138 - 113449 98 103 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MASGMSARSRQSSAHAATRPSAICIKEGRPNTHTELACGDSAAMSSSTGSRVAASMVAVS QIGRAPTWRCCSELSVSADGNVNIVLLGCFSAAMDSRCAVVAA >gi|302034479|gb|GL383156.1| GENE 126 113481 - 114365 826 294 aa, chain + ## HITS:1 COG:BS_yqfL KEGG:ns NR:ns ## COG: BS_yqfL COG1806 # Protein_GI_number: 16079578 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus subtilis # 8 265 6 259 270 179 40.0 7e-45 MAESPLEIHVIADSTGETAVRLARAARSQFEGAHWHIVRHPMIGTVPEMVSALEAVSEAH EAGQWVCVVHTLVLPDMRRMVSDACEEMGIRELDLMGPMLEAMEEASGLDADAVPRRPVG VEADYFTRISAMEFAVRNDDGAIPDRLTEADICLVGVSRSGKTPLSIYLGYLGYKTVNVP LVPGIAPPTELAAVDRWRIVGLTIDAQRLLEIRGRRVRGLGGFGNEDGYADLAAIYEELD EGGKIQRRLGCPIIDTTGLALEESATKVIDVVDQRAKTAGTRLRKPAGSYRMRP >gi|302034479|gb|GL383156.1| GENE 127 114704 - 117355 2675 883 aa, chain + ## HITS:1 COG:BMEI1436 KEGG:ns NR:ns ## COG: BMEI1436 COG0574 # Protein_GI_number: 17987719 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate synthase/pyruvate phosphate dikinase # Organism: Brucella melitensis # 10 868 56 917 930 938 55.0 0 MTDRYVYDLSEGSAEMKPLLGGKGAGVAEMKRLGVPVPDGFTVTTEACVDTMTRKGEWPE DLESQVWDGLKRLEERTGRVLGDDKKPLLVSVRSGAVISMPGMMDTILNLGISDDTVEAI AKEAGNERFAWDCYRRFIQMYGEVVEGIDAHIYEDALTALKEKKGVESDTDLSADDLKGL VDTFKKLSNEQLGGNWTTDPREQLMRAVDAVFRSWLNPRAFVYRKANKIPDDLGTAVNVM QMVFGNRGDTSATGVCFTRNPATGEKELYGEFLVNAQGEDVVAGIRTPRSLAEMEEVLPE AYHDLIDTMKKMESHYRDMQDMEFTVENGKLYLLQTRNGKRTAAAALKVARDLVDEGVIT KEEALMRIEPAQLDQLLHEAIDPDHSEQPVAEGLPASPGAAVGEAVFDADVAAERGAKGE KVVLIRFETTPDDIHGVIVSQGVLTAHGGMTSHAAVVARGMGKPCVAGARGIKIDAKAAT LTIGDTVIHEGDMITLDGSTGEVFASGLKLIPPQINADFQEVLSWADEIRRLGVEANADN ATDAAKARELGAEGIGLCRTEHMFFGADRLPAMHEMITADTPEERQAAVDKILPMQQDDF EGIFTAMKGLPVTVRLLDPPLHEFLPNLVEQSLKVQKMENQGADAGELDKERRLLAQVKK LHEQNPMLGTRGCRLGMLYPEIPDMQARAIIRAVLSVLKKEGETVQIHIMIPLVFTPIEL ETHRRIVQQAIDEEFESAGTKVDVKIGTMIELPRAALVADKIAEVADFFSFGTNDLTQTT LGISRDDAENGFLTEYLRTKVLKDNPFASIDQEGVGQLVAGAVEKGRKTNPELSVGVCGE HGGDPDSIHFFNKTGLDYVSCSPFRVPIARFAAAQAVISQQEK >gi|302034479|gb|GL383156.1| GENE 128 117528 - 118703 792 391 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5112 NR:ns ## KEGG: HMPREF0675_5112 # Name: not_defined # Def: FHA domain protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 391 1 391 391 702 100.0 0 MSQTFGAWRATYIPGSWVVLTGPSSLVVMQPAAPRHSGLVSSIWRHVAEAKDPESLVETL SIIGLAKMPSLGAFFWVDGEMYSLARGQIVVKDASTGEIVNHGDGLLTWSEKKLNPATIV VEMEQAGQGLSMPLLLGVAQASKLIIDATGNVEPFIVPQTDEVHRPRVLGDDALKPWTSE SDEAHKADESEGSDETGEDAGSGEAPDDEDRAPGFVEVPAPGEVPETAVGPASVTESATS DEARESDGEDAVAPVRSQDDSHGDWRFASISTSDRLSSQSDAAAATLVSSTGEVTHLYGP VLIGRAPRGDNGEDIMRVPSPGQDISRTHVKVAPGQWGIEVTDMHSTNGTVVCRIGQEPL QLESGQTVDLSIGDSVDLGDGVVITIEAYQG >gi|302034479|gb|GL383156.1| GENE 129 118850 - 119578 671 242 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5111 NR:ns ## KEGG: HMPREF0675_5111 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 242 1 242 242 494 100.0 1e-138 MGHILVLSGAGRYADNIHDFDATSEAVSQVLTERGHQVEVRRSYPEALDHLAGADLLIVN TGGGDPEEEWDYIPEWSRAHSKILEHHEAGKPILGLHTACNTFCDWDLWSSILGGKWVLG VSGHPERSYAVFEPMPEAADHPILRGVEQVVVYDERYSDLDINPLATPLLFHETGEEFHP MCWVMGNSVVYDGLGHSPRSYYSASRRQLLCNEVSWLLNWKRREAAAKGAAEVNPSSTQP VL >gi|302034479|gb|GL383156.1| GENE 130 119602 - 120276 567 224 aa, chain - ## HITS:1 COG:L63310 KEGG:ns NR:ns ## COG: L63310 COG0274 # Protein_GI_number: 15673422 # Func_class: F Nucleotide transport and metabolism # Function: Deoxyribose-phosphate aldolase # Organism: Lactococcus lactis # 15 220 7 213 220 179 51.0 3e-45 MSSAPLSATELAGMIDHTLLTPEATHNDVAKLVADAKKYGTWSVCVSPSMLPLNLDMGDV HLAVVCGFPSGKHTSAVKAAEAREAIAAGAEEVDMVINLGLVKEGRWEDVTADIAAVKQA VPDPKILKVIIESAVLTDDEIVRACQAAEKAGADFVKTSTGFHPRGGASVEAVKVMADTV GGRLGVKASGGIRDYQTACAMVEAGATRLGVSSTAKILAGAPTE >gi|302034479|gb|GL383156.1| GENE 131 120637 - 120864 169 75 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVVKWLSVIVFLRSPRRLTGKILSCPVRLFQSLRSSGLMYTLSLMTTACTVITFIRLIVI PILGAYCLTKGIEAL >gi|302034479|gb|GL383156.1| GENE 132 121016 - 121747 748 243 aa, chain - ## HITS:1 COG:MT3872 KEGG:ns NR:ns ## COG: MT3872 COG0745 # Protein_GI_number: 15843385 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Mycobacterium tuberculosis CDC1551 # 12 242 55 285 286 289 66.0 4e-78 MAFPTQPSRFTRADGSPIRVLVVEDEPSLTGLLSMAMRYEGWDVTTANSGAHAVHEAQAT RPDVIVLDMRLSDFDGLEVMRQIRINQPTVRAVFLTAKDAASGRIAGLTAGGDDYVTKPF SLEEVIARLRALLRRSGATEPKPDSMLTVGDLTLDEDSREVRRAGEEIHLTTTEFELLRY FMRNPKRVLSKAQILDRVWNYDFRGQANVVELYISYLRKKIDRGHKPMIHTMRGAGYVLK PAE >gi|302034479|gb|GL383156.1| GENE 133 121741 - 121866 69 41 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313771713|gb|EFS37679.1| ## NR: gi|313771713|gb|EFS37679.1| hypothetical protein HMPREF9574_01917 [Propionibacterium acnes HL074PA1] hypothetical protein HMPREF9575_00529 [Propionibacterium acnes HL110PA1] hypothetical protein HMPREF9576_00553 [Propionibacterium acnes HL110PA2] hypothetical protein HMPREF9580_00494 [Propionibacterium acnes HL087PA2] hypothetical protein HMPREF9587_00895 [Propionibacterium acnes HL025PA1] hypothetical protein HMPREF9589_00207 [Propionibacterium acnes HL059PA1] hypothetical protein HMPREF9593_01612 [Propionibacterium acnes HL046PA2] hypothetical protein HMPREF9605_00843 [Propionibacterium acnes HL036PA2] hypothetical protein HMPREF9611_00093 [Propionibacterium acnes HL063PA1] hypothetical protein HMPREF9612_00100 [Propionibacterium acnes HL063PA2] hypothetical protein HMPREF9616_00895 [Propionibacterium acnes HL007PA1] hypothetical protein HMPREF9617_02549 [Propionibacterium acnes HL056PA1] hypothetical protein HMPREF9591_01078 [Propionibacterium acnes HL086PA1] hypothetical protein HMPREF9597_00355 [Propionibacterium acnes HL005PA4] hypothetical protein HMPREF9598_00569 [Propionibacterium acnes HL050PA1] hypothetical protein HMPREF9600_00970 [Propionibacterium acnes HL050PA3] hypothetical protein HMPREF9608_00138 [Propionibacterium acnes HL067PA1] hypothetical protein HMPREF9609_00419 [Propionibacterium acnes HL027PA1] hypothetical protein HMPREF9613_00154 [Propionibacterium acnes HL002PA1] hypothetical protein HMPREF9618_00063 [Propionibacterium acnes HL082PA1] hypothetical protein HMPREF9620_01315 [Propionibacterium acnes HL037PA1] hypothetical protein HMPREF9564_00444 [Propionibacterium acnes HL053PA1] hypothetical protein HMPREF9573_01018 [Propionibacterium acnes HL072PA2] hypothetical protein HMPREF9594_01240 [Propionibacterium acnes HL005PA1] hypothetical protein HMPREF9596_00639 [Propionibacterium acnes HL005PA3] hypothetical protein HMPREF9565_00536 [Propionibacterium acnes HL053PA2] hypothetical protein HMPREF9569_00102 [Propionibacterium acnes HL078PA1] hypothetical protein HMPREF9615_00245 [Propionibacterium acnes HL002PA3] hypothetical protein HMPREF9572_02406 [Propionibacterium acnes HL072PA1] hypothetical protein HMPREF9583_02223 [Propionibacterium acnes HL038PA1] hypothetical protein HMPREF9590_01578 [Propionibacterium acnes HL059PA2] hypothetical protein HMPREF9602_02372 [Propionibacterium acnes HL030PA2] hypothetical protein HMPREF9337_02205 [Propionibacterium acnes HL096PA3] hypothetical protein HMPREF9338_00061 [Propionibacterium acnes HL096PA2] hypothetical protein HMPREF9344_00062 [Propionibacterium acnes HL097PA1] hypothetical protein HMPREF9571_00914 [Propionibacterium acnes HL043PA2] hypothetical protein HMPREF9581_00089 [Propionibacterium acnes HL087PA3] hypothetical protein HMPREF9586_00062 [Propionibacterium acnes HL083PA2] hypothetical protein HMPREF9579_00061 [Propionibacterium acnes HL087PA1] hypothetical protein HMPREF9563_00874 [Propionibacterium acnes HL020PA1] hypothetical protein HMPREF9588_01137 [Propionibacterium acnes HL025PA2] hypothetical protein HMPREF9343_00219 [Propionibacterium acnes HL099PA1] # 1 41 1 41 41 67 100.0 5e-10 MPWIKGFTWKVRFALWVSCYLPVKMGNGVTPAAAGADVKSW >gi|302034479|gb|GL383156.1| GENE 134 122171 - 123316 1036 381 aa, chain + ## HITS:1 COG:Cgl0455 KEGG:ns NR:ns ## COG: Cgl0455 COG0306 # Protein_GI_number: 19551705 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate/sulphate permeases # Organism: Corynebacterium glutamicum # 3 362 38 415 461 315 51.0 7e-86 MSSTLLIVVIVVVTALAFDFTNGFHDSANAMATSVATGALKPKVAVIIAAVLNVIGACLS TEVAKTISGGIVNDHLVTAPMVFAGLIGAIIWNLATWLFGLPSSSSHALFGGLIGAVLVE AGMSGIDAGKIMSKIVLPALVAPFVAGIAALVATWLAYRITNHTAHHSSRMFLNGQRVSA SMVALAHGTSDGQKTMGIITLVLISAGYQASGTGPEWWVILAAGCAIGLGTYSGGWRIMR TMGKGLCDIESPQGFAAETASTAAILASSHLGFALSTTHVCSGSILGSGIGRHTEVRWAT AGKMVIAWLVTLPAAALVGAVTSAVAGAGTWGVIVDLGLLAVMAALIVRQANQHKVDHRN VNDSTQVGVRKGSAVAGGTAA >gi|302034479|gb|GL383156.1| GENE 135 123313 - 123546 298 77 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5106 NR:ns ## KEGG: HMPREF0675_5106 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 77 1 77 77 94 100.0 1e-18 MNIDWTSLGLVSVVTVVATVLIVSVVSGGALMLDRAHARAEAGSDGAAGLVALGWTAIGV AGLIVLYGLYLLIPYFH >gi|302034479|gb|GL383156.1| GENE 136 123806 - 125659 2027 617 aa, chain + ## HITS:1 COG:Cgl2740 KEGG:ns NR:ns ## COG: Cgl2740 COG0443 # Protein_GI_number: 19553990 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Corynebacterium glutamicum # 1 617 1 618 618 741 68.0 0 MARSVGIDLGTTNSCVAVLEGGEPTVIPNAEGARTTPSVVAFTNSGETLVGEVAKRQAVT NVDRTVRSVKRHMGEAWTMGVDDKTYKPQQISAFILQKLKRDAEAYLGEPVTNAVITVPA YFSDAQRQATKEAGEIAGLAVDRIVNEPTAAALAYGLDKTDKDQTVLVFDLGGGTFDVSL LDISDGVFEVKATNGDNHLGGDDWDQRIVDWLVTQFKNANGIDLAADKMAKQRLQEAAER AKIELSQASETHINLPYITAGAAGPLHLDEKLTRAEFQRMTSDLLERCRTPFNAVMKDAG LNVSQIDEVILVGGSTRMPAVAELVKELAGKDPHKGVNPDEVVALGASLQAGVLKGEVKD VLLLDVTPLSLGIETKGGVMTKIIERNTTIPTKRSEVFTTAEDNQPSVMIQVFQGEREFV RDNKSLGNFELTGLMPAPRGIPQIEVSFDIDANGIVHVHAKDMATGKEQSMTVTGGSALG KDEIDRMVKEAEANAEADKKRREAVEMRNEADALAFRTEKLLDENSDKIPEDTKTPVTEA IATLKETLKGTDNDDEVKAAMDDLNQKASAMGQAIYAAAQQAQAENPQGQDAESASSESG DDTVVDAEIVDDEDEKK >gi|302034479|gb|GL383156.1| GENE 137 125744 - 126409 686 221 aa, chain + ## HITS:1 COG:Cgl2739 KEGG:ns NR:ns ## COG: Cgl2739 COG0576 # Protein_GI_number: 19553989 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone GrpE (heat shock protein) # Organism: Corynebacterium glutamicum # 7 192 42 216 218 89 37.0 7e-18 MTDKNVNPDDDQADENRDDNVDERFADIVGDVDIDADQSATDSPAPEELSRESQLEALLA ERTEDLQRLQAEYVNYKRRVDRDRALSRQSGVDKVITDLMPVLDSIAMARQHGEVEGGFK LVVDELEKVANNHGLTSFGEVGDVFDPNLHEALMQMPMEGVSVTSVSQVMQPGYKLGDRV LRPARVAVSDPDPNATSADESSQADGESAQADEDDETPRNE >gi|302034479|gb|GL383156.1| GENE 138 126483 - 127625 753 380 aa, chain + ## HITS:1 COG:ML2494 KEGG:ns NR:ns ## COG: ML2494 COG0484 # Protein_GI_number: 15828348 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone with C-terminal Zn finger domain # Organism: Mycobacterium leprae # 1 363 1 369 388 315 49.0 7e-86 MSTKDWAEKDYYKILGVSKDAKPEEIKKAFRKIARDNHPDSHPGDKAAEARFKEASEAND VLSNVKKRKEYDQARSLFGSAGGFRFPRGGAQTSVNVEDFLRTASNGDGFGDLFGNLFGA SGGRRTASRSPRRGADVEGETTISFDDAVSGTTVTMDMVSQAPCQACRGTGARAGTVPRV CSTCQGSGMHASSAGGVFEMTEPCPDCHGRGMIVEDPCQVCHGSGRAKSTKSMQIRIPAG VEDGQRIRIKGKGSPGENGGKAGDLYVKVTVRPHEIFGRDGHNLTVTVPVTFPEATLGAE VEVPTLAGTTVRLRIPAGTPNGRTFRVRGRGVPRSDGSRGDLLATVEIAVPESLDDDARH VVERLRDSLPQATPRPWEVK >gi|302034479|gb|GL383156.1| GENE 139 127627 - 128088 378 153 aa, chain + ## HITS:1 COG:MT0368 KEGG:ns NR:ns ## COG: MT0368 COG0789 # Protein_GI_number: 15839739 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Mycobacterium tuberculosis CDC1551 # 18 108 7 97 126 100 60.0 7e-22 MVRRSRNLSDAVDLAVIDKDAAIFAISVAAELAGMHPQTLRTYDRLGLVVPERTRGRGRR YSMRDVAALRMVQHLSQEEGINLNGIRRILQMERRIEQLSEQVDELTDTVRGMQVARYQG SEDPRVFTAESTGRVHMGRTVVHAQLALPSHRG >gi|302034479|gb|GL383156.1| GENE 140 128192 - 129100 651 302 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5101 NR:ns ## KEGG: HMPREF0675_5101 # Name: not_defined # Def: GDSL-like protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 302 1 302 302 518 99.0 1e-145 MKRILKILSVVVAVVIVAGIAIGLRPYTHAFGSVFQNCYRSSAASAPGPATSAFSAVSST VTPLQAPTPAAYAAGQVTEHGGTLATLGLGDSVPQGGTCTGCTTFIERVGTDMARKAGVK AAVHNESVSGYKTADLLTQLESNNAKALLATSDLAIVTIGANDFDLDTMVGQCAHSDASC IADDVNGVTDRVRTILERVKAAMKTPRATVVVTGYWDVGLDGKAGRENGPDYVKVTDMIT EAFNANVKKIAHEVGAVYVDFRTPFRGADGTRDDTALLTDDGDHPSEQGHKVLAEAVEAA LS >gi|302034479|gb|GL383156.1| GENE 141 129204 - 130247 942 347 aa, chain + ## HITS:1 COG:ML1784 KEGG:ns NR:ns ## COG: ML1784 COG1062 # Protein_GI_number: 15827950 # Func_class: C Energy production and conversion # Function: Zn-dependent alcohol dehydrogenases, class III # Organism: Mycobacterium leprae # 1 345 1 359 361 150 31.0 3e-36 MTETMLAERFHAADRSITLEDIPIPHPGPGEVLVKVAYCGICHSDLSLISGAFPAALPVV TQGHEASGTIVELGAGVIGWKEGDRVIPSAGRPCLKCRKCRRGAFTDCLDLNLMAFAYDG AWAEYHIAQASGMTKIPDNVPLDQAALLADAVSTPYAAVVRTGKVHMGNAVAVWGVGGVG THLVQLAKLAGGVPVIAIDLNDAVLERAKRVGADHTLRSDDPELMQKIEDITHGRMIDVA FDAVGIKPTLRACVDSLDVDGKAVSVGLSAQDIDAGPFLNFNLQRKQVLGHLGYKSQDIA LLAEMLSYHRLDLTESISRVIPLKDVESGIAELESHQGNPIRILVKP >gi|302034479|gb|GL383156.1| GENE 142 130315 - 132024 1294 569 aa, chain + ## HITS:1 COG:Cgl2162 KEGG:ns NR:ns ## COG: Cgl2162 COG2985 # Protein_GI_number: 19553412 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Corynebacterium glutamicum # 51 569 3 537 539 237 32.0 4e-62 MQLCATSVSERRPTIQGLSPGSTGIAATRILLSRRERRHDARSFMTVLTDFLATHQLLTI LIVLASGALLGQIKFGPLRFGAAGALFMGLVVGALDPRFGQNLGMIKGLGVVLFCYTVGL AAGSTFLSDLKRQWGLMLAGVVGLAVMAAAGLGLGRLFGLTPAHVAGLYAGVLTSPAIDA ASMATHGAADTLVGYALSYPVGVVVGLIMVAIIAKRCWPASKDNTSMAEAGLTAVSTVVD RETSIRQTPGFNDDQVRMSYLLRDGEMRLATPDDDLHVGDQVLVVGNPDDVNRAVEHLGH VSERTLTNERNELDFRRFVVSNPALVGRTLGSIDVRGRTSGKVTRVRRGDLDMLARSDIV LQPGDRVLCVVPAHRLSDAADLFGDSEARVSQVDALSLGLGAALGLLLGALMVALPRGLQ FELGTAAGPLVMGMILGSIHRTGPLRWQLPHATNAILRQLGLMIFLACVGLASGPAFLSQ AVSGTGLAVIAVSAVTLVLGGAIVIAAAWCMKLSAQRATGAFAGFVGQPAILSYANSLVN DERIESAYGALFALGTVVKILLVQVIVLV >gi|302034479|gb|GL383156.1| GENE 143 132067 - 133425 1379 452 aa, chain - ## HITS:1 COG:aroP KEGG:ns NR:ns ## COG: aroP COG1113 # Protein_GI_number: 16128105 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Escherichia coli K12 # 6 448 9 449 457 420 50.0 1e-117 MTEPDQQLHRSLRNRHIQLIALGGAIGTGLFYGAADSIAAAGPAVIVSYLIGGVVIYLIM RALGEMSVHNPTSGAFSEYAHQWWGDLPGFISGWNYWFNYIFVSMAELSVVGIYINYWFP VVPRWVSAAVLLAIVTTVNLLHVRAYGEVEFWFAIIKVVAIIAMIVLGLWIIFFGTGSTP ATGIGNLWRNGGFLPHGVTGMLAGIIVVMFSFGGTELIGITAGEAEDPQRSIPRAINRVV GRILLFYVGALIVMVAIVPWTKIDGNASPFVQIFDLVGIPGAAAILNLVVLTAAISAYNS GLYANGRMLHALAHQGDAPAFLGKVNKAGSPWAGVLLSSAVTAIAVVVVGLLPEQAFVYI MSIAMIAAIINWATIIITQMLFRRRLDPESRSELRFTMPGAPVTNWIVLAFLVLMVVVMT TMPPYRIAVAIGPIWLAVLGLGWQLSRRRQTL >gi|302034479|gb|GL383156.1| GENE 144 133581 - 133961 389 126 aa, chain + ## HITS:1 COG:PA3470 KEGG:ns NR:ns ## COG: PA3470 COG0494 # Protein_GI_number: 15598666 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Pseudomonas aeruginosa # 7 124 21 134 152 69 41.0 2e-12 MRGRTCLNVRKKGADHVILPGGKIELGETPLEAAIREAREETRLVLDPDDLKHLGTFDAP AANHDADGIRCVVYVCNWREIWPEPVPDSEIVEYEWTDLDHCYDDVRQAPLLCDRVIPAL QQQGLL >gi|302034479|gb|GL383156.1| GENE 145 133997 - 136420 1930 807 aa, chain - ## HITS:1 COG:Cgl2500 KEGG:ns NR:ns ## COG: Cgl2500 COG0577 # Protein_GI_number: 19553750 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Corynebacterium glutamicum # 7 806 21 853 853 243 27.0 1e-63 MIHERRRLIPTMIAVIIGVAFVASTLMLMDSIKAYTLRIQAAAVGDATAVVTAKEPSKPM SSITVDKVAAVPGVTSVEQTRNAFLQRTDNGQASFVNGHLVPAHPHLVKGRAPAKLDEVA VNQSTAGNNAGIGSKIIVNDPSRNGAKPITLTVVGVLDPDARTTTTPTSPEIYLSAANLG RISGHSGANTVYVNSDRPASQIAQEVSKVVGTTATVRTADDERAYEANQASQGFAAMTTF MGAFAVIALVVAAIVIVNTFTILVVQRTRTLALARCIGATRKQVRRSVLGEALIAGLIGS VVGTALGIGVTQLMLMGLKAAGSPIDTSVSVTVTSCIIPILVGVVVTTLAALPPARRATK VTPVVALQPVTETPTRKIGRVRVGFGTLLFLAGTALVITCATSDMETKNAVMCGVAGGFI SFAGVLVLAPVLIGSLGRAIGVARPGGIPGELAIENTQRNPRRTATTASALLIGVTLIAT VATGAATGRASIGNMMNGHFPVDATVRAQGPLNNATIGDVKRSDGVWQVATVTTVPGTVE AGGKATKVAVQAASPEFPKVVRDESAAKGLDDSHAVGALPGAADGSKITVTVNGKKANLT LVRHGKDNEGLIVTQGILTKLAPHAQPTEIQVRYQDGTDQSKATQALSKSMSTHPGVTVT SSADQKAQMDKIINIMLGMVVGLLVISVIIAIVGVANTLGLSMVERTREIGLLRALGLTR AQVRSMFGKEALMLSGIAAILGIALGIGYGIAGSHALFGSLMTVETSVPWLQLLIVALVA VLAGWLASVIPGRRGATIKPAVALAEE >gi|302034479|gb|GL383156.1| GENE 146 136417 - 137151 276 244 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225084369|ref|YP_002657150.1| ribosomal protein S16 [gamma proteobacterium NOR51-B] # 11 243 1 227 309 110 30 3e-23 MSASVTAATTMTSRTASAVRTLDLTKTYGSGTTLVRALRSVTLDIPSGRFTAIMGASGSG KSTLLHCITGLDSPTSGRVWIGDTEITHLDDDALTKLRRQHVGFVFQSFNLMPTLSAADN ITLPLRLSHTKVDKEWFDHITGMLGITERLGHKPSQMSGGQQQRVAVARALVTRPDVIVA DEPTGALDSEASGDLLTFLRHCVDDLGQTVVMVTHDHDAAARADDIVTVTDGQVSTARSQ EALA >gi|302034479|gb|GL383156.1| GENE 147 137296 - 137970 694 224 aa, chain - ## HITS:1 COG:all4635 KEGG:ns NR:ns ## COG: all4635 COG2197 # Protein_GI_number: 17232127 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Nostoc sp. PCC 7120 # 5 214 2 208 219 183 45.0 2e-46 MTDPIRLLLADDQQMVRAGFRLVLDAQPDMSVVGEANDGAEALQLVDELAPDVVLMDIRM PVLDGLGATEKIMTSHPEAKILVLTTFDLDEYVHSALRAGASGFMLKDAGPTELLAAIRA VRDGDSVVAPSATRRLIERFIPRQGEGAATITDPKLVETLSDREREVLTCVGEGLTNAEI AERLYLAETTVKTHIGHILSKLGLRDRVSMVITAYDAGLVRPGR >gi|302034479|gb|GL383156.1| GENE 148 138001 - 139200 794 399 aa, chain - ## HITS:1 COG:CAC2940 KEGG:ns NR:ns ## COG: CAC2940 COG4585 # Protein_GI_number: 15896193 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 155 397 167 390 402 93 29.0 8e-19 MILDSVMAFLVLIAAFATWGHDTNHNTAYRAWMALWVLTVCASWVWARTKPEVTASVLVA SHILQLAVYPFPSPQNTLVPLILYQVSLKTDPPRRRFWLAMCVVGPVSAGVSWGFAPTTS EPISYNTHLIRFSVIIIACMASCLAAWFAGSATRDRRQTMAALRQRAIDLERERDQSIRL ATQEERAKIARDIHDIVAHSLSVIVVQADGGAYLAHHEEAGDIETRLSASGQALDTIATT ARHALDETRRLVGVLRDNDAGPQLSPTQGLDDIPNLIREMKGALAITLTIKGRSECHEPL SQGAELACYRVVQEALTNVLKHGGPTATAHVTISHHPDDVTLDILDDGRGTSVTGIERAD GAGHGLVGMRERMSAWGGTLEVGSRPGHGFRVRAVIPTR >gi|302034479|gb|GL383156.1| GENE 149 139437 - 140624 894 395 aa, chain + ## HITS:1 COG:MT0951 KEGG:ns NR:ns ## COG: MT0951 COG1914 # Protein_GI_number: 15840347 # Func_class: P Inorganic ion transport and metabolism # Function: Mn2+ and Fe2+ transporters of the NRAMP family # Organism: Mycobacterium tuberculosis CDC1551 # 1 394 37 429 429 365 57.0 1e-100 MGPAFVAAVAYVDPGNVAANLAAGAGYGYLLVWVLVVANVVAMLVQYLSAKLGLVTGHSL PELVGGALPRRGSRLAYWFQAELVAAATDLAEVIGGAVALQLLFGLPLIVGGLMTGALSL AILAIPSRHGQRTFEIVIIGMLVVIAIGFTAGLAFSPLSWGGVASGLVPRFEGTETVMLA TSMLGATVMPHAVYMHSSLVRDRHGTDDRPKRITTLLRATRWDVAVSLVLAGSVNIAMLL LAAASLQGVKGIDGIAEAHAAMSNSMGPVVGLIFAVGLFASGLASTSVGAYAGAEIMAGL LHMRVPMLVRRLVTIIPALIILASGANPTQALVWSQVLLSMGLPLVLVPLARFTGDRRLM GQWTNGRVMAAIAWIVVAAVSALNVVLVVETVMGA >gi|302034479|gb|GL383156.1| GENE 150 140660 - 141190 332 176 aa, chain + ## HITS:1 COG:AGl1244 KEGG:ns NR:ns ## COG: AGl1244 COG1853 # Protein_GI_number: 15890743 # Func_class: R General function prediction only # Function: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 25 166 11 153 312 63 29.0 2e-10 MSDKLKRVTTPNPAPTSAHELANDLATAFRGYPAGVAILTTMGAAGPEGLTVSSLASVSV VPAVVSVSLGNGSTTLATLTEESRVIVHMLDADRADLADDFAVPGADHFAGTEWAPSAEG APRLEMQGPILHGFVQSMTDTGSATLIAVTIDRIEAGNCHAPGLVRMAREWHEIPR >gi|302034479|gb|GL383156.1| GENE 151 141256 - 142164 964 302 aa, chain + ## HITS:1 COG:slr0943 KEGG:ns NR:ns ## COG: slr0943 COG3588 # Protein_GI_number: 16330995 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1,6-bisphosphate aldolase # Organism: Synechocystis # 1 302 1 300 300 333 58.0 2e-91 MTATNARAQQTERMGTAPGFIAALDQSGGSTPKALKAYGVEPEVYGDDQDKMFDLVHEMR TRIITSPSFTSDHILAAILFEMTMDRKIEGIPTGDYLWEKKGIVPILKIDKGLADEDRHV RLMKPIPGLDELLHRAVEDKHIFGTKERSVILDDDKAGIEKIVDQQFELAEQVRAAGLVP ILEPEVDIHALHKEKAEERLHNLIRAHIDSLPLDAKIMLKLTIPSSEDLYADLIADPKVL RVVALSGGYSREEANKKLARNRGLIASFSRALAEGLNVAQSQQEFDQTLRASIDSIYAAS VS >gi|302034479|gb|GL383156.1| GENE 152 142143 - 142367 148 74 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313771690|gb|EFS37656.1| ## NR: gi|313771690|gb|EFS37656.1| hypothetical protein HMPREF9574_01894 [Propionibacterium acnes HL074PA1] hypothetical protein HMPREF9575_00552 [Propionibacterium acnes HL110PA1] hypothetical protein HMPREF9585_01561 [Propionibacterium acnes HL083PA1] hypothetical protein HMPREF9593_01588 [Propionibacterium acnes HL046PA2] hypothetical protein HMPREF9606_00052 [Propionibacterium acnes HL036PA3] hypothetical protein HMPREF9620_01340 [Propionibacterium acnes HL037PA1] hypothetical protein HMPREF9566_00206 [Propionibacterium acnes HL045PA1] hypothetical protein HMPREF9573_00993 [Propionibacterium acnes HL072PA2] hypothetical protein HMPREF9594_01215 [Propionibacterium acnes HL005PA1] hypothetical protein HMPREF9602_02396 [Propionibacterium acnes HL030PA2] hypothetical protein HMPREF9570_00039 [Propionibacterium acnes HL043PA1] hypothetical protein HMPREF9568_00320 [Propionibacterium acnes HL013PA2] # 29 74 1 46 46 63 97.0 7e-09 MTHTLVRSSKRTMMRAISWGRRVFEGANVSSRSNATSSGITLELYKADECSRTTTGPHVS QRARLSKGQDTDAA >gi|302034479|gb|GL383156.1| GENE 153 142318 - 142992 618 224 aa, chain + ## HITS:1 COG:L165449 KEGG:ns NR:ns ## COG: L165449 COG0561 # Protein_GI_number: 15672552 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Lactococcus lactis # 1 222 24 248 252 169 36.0 3e-42 MARIIVRLLDRTSVCVISGGQFGQFRTQVVEALVDAPRLDRLHLLPACGTQYYRCVDGEW QRIYVEALTDDEKSRAMEAVETCARDLGLWEEHTWGPVLEDRESQITFSALGQQAPVDAK KAWDPSGDKKLKLREAVAGKLLDLEVRAGGSTSVDITRVGRDKSFGIAKLLEMTGLSKAD VLFYGDRLDEHGNDYPVKAMGIPCVAVDDWHDTLVKLEDLLSQA >gi|302034479|gb|GL383156.1| GENE 154 142999 - 144357 1183 452 aa, chain - ## HITS:1 COG:SA0180 KEGG:ns NR:ns ## COG: SA0180 COG1114 # Protein_GI_number: 15925890 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid permeases # Organism: Staphylococcus aureus N315 # 13 424 11 426 449 284 40.0 3e-76 MSDLRTVPKHTALLIGLMIFGLFFGAGNLIFPVELGRLAGHSAPVTAAGFLVTAVGIPIV AIISSAVSGCSSVHGMTSRVSSQYATIFTCLLYLTIGPAFAIPRTATVSYEVGVAPFIQG HGPALPIFTIVFFAMTLVAALKPGKLMDWVGRYLTPLFLALLAILIVATLIHPMPTVANR PPQPPYDHQPFMHGFLDGYNTMDALASLAFAIVIIEAINQRGSTGRHDVTHITIRAGLVA TIPLTLVYVSLAWLGRTSTLVVPNAANGGVVLAGVSRHYYGTAGQVLIAAIVLVACLKTA IGLVVACAEIFRRMFPAGPSVRSWVVIFSVASAIIANAGLTTIIAWSTPVLMFLYPLAIT AIILGLLDPWLGASRLPHRIMTGCVVLAALPDLVRALPIQGSGTRAITHVADMVLPWASD GLGWGLPAIIGLAAGWGASLILGRPRRWGTSS >gi|302034479|gb|GL383156.1| GENE 155 144635 - 147220 1779 861 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 4 853 1 804 815 689 44 0.0 MRHVMDTNLTTMSRDAVTAATRHALAHGNPSVEPSHLLHALFTIPDNTVSPLVAGLGIDP QQVDAVATAAMRSLPSSTGASVAQPQLSGAFARVIADAQNRAEAMGDSFVATEHLLISLT AVPSDVQNGLAGLGLKPDSLAAAFNEGRGDRRVTSEESEGGESALAKYSVDLTERARAGK LDPVIGRDQEIRRVVQVLARRTKNNPVLIGEPGVGKTAVVEGLAQRVVAGDVPDSLKGRR VVSLDLSSMVAGAKYRGEFEERLKAVLNEIKEAEGQIITFIDELHTVVGAGASGEGAMDA GNMLKPMLARGELRMIGATTLDEYREHIEKDPALERRFQQVFVGEPSVEDTIAILRGLRE RYEAHHKVRITDGALVAAASLSHRYITARQLPDKAIDLIDEAASRLRMEIDSSPEEIDTL RREVDRMKMEIFAVEKEDDPASQQRLTRLRADMADKEETLRGLESRWEAEKAGLNKVGEL KTRIDELRTAADKYQREGDFGRASEILYGQIPGLEKEMEAAAKAEEETPRMVSEEVGTSD IAEVVSSWTGIPVGRMMQGEQEKLLHMEERLHERLIGQDRAVKTVSDAVRRSRAGISDPN RPTGSFLFLGPTGVGKTELAKSLAEFLFDDETALVRIDMSEYMEKHSVSRLVGAPPGYIG YEEGGQLTEAVRRRPYSVILLDEVEKAHSDVFNILLQVLDDGRLTDGQGRTVDFRNTILV LTSNLGSQFLSDASLDDHAKREAVMGAVRQAFRPEFLNRLDDVVMFDPLSMADLGRIVET NLAKLNSRLAERRITIAVTDAGKDWLAMAGFDPIYGARPLRRLMQTTIDDQLARKVLSGQ VQEGDTATFDINEAGDGLVIL >gi|302034479|gb|GL383156.1| GENE 156 147371 - 148798 1036 475 aa, chain + ## HITS:1 COG:Ta0334 KEGG:ns NR:ns ## COG: Ta0334 COG0477 # Protein_GI_number: 16081466 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Thermoplasma acidophilum # 19 237 7 225 445 124 29.0 5e-28 MSDAQATERTITSLIPARIDRLPWSTFHTMVIVGLGTAWILDGIEVQIVAANGFAKPLHM STTEVTAAATFYLLGQVLGALFFGKLTDRIGRKKLFTLTLLVYLLGSGIAGLSFSTWFLY VCRFIAGSGIGGEYSAINSAIDELIPAQYRGRVDLSVNGTYWAGVMLGSVATIYLLDPTK VAEFWGWRIGFFIGSVLGIVVILIRKHIPESPRWMLTHGYGEQAEEIVAGIEQDVRESGH ELEPVSDDQAITLEPEVRRQGRRNFSQRWVEFKESGAELVEVFLRRYWKRTVLGVTLMVT QSFLYNAIFFTYEIVLSQFYSVSKSDVGLYMIPFAVGNLLGPILLGRFFDTVGRRKMIFA TYGIAALVLAISAILFQRDALTPTTHTIFWCVAFFFASAGASSAYLTVSEIFPLEVRGQA ISYFFSIAQIAGAIAPFIFGNLIGDGSSRGPPCRRLLHRCRHHAYRWSRRFVHGR >gi|302034479|gb|GL383156.1| GENE 157 148701 - 148883 189 60 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5085 NR:ns ## KEGG: HMPREF0675_5085 # Name: not_defined # Def: transporter, major facilitator family protein # Organism: P.acnes_SK137 # Pathway: not_defined # 7 60 450 503 503 103 98.0 3e-21 MTVPRAAPLVGGYFIGAGIMLTGGLVALFMGVDAEGKGLEAITDPLSRDRAKKSAARQAE >gi|302034479|gb|GL383156.1| GENE 158 148837 - 149133 110 98 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|289425758|ref|ZP_06427513.1| ## NR: gi|289425758|ref|ZP_06427513.1| hypothetical protein HMPREF1034_1447 [Propionibacterium acnes SK187] hypothetical protein HMPREF1034_1447 [Propionibacterium acnes SK187] hypothetical protein HMPREF9567_01855 [Propionibacterium acnes HL013PA1] hypothetical protein HMPREF9589_00233 [Propionibacterium acnes HL059PA1] hypothetical protein HMPREF9612_00129 [Propionibacterium acnes HL063PA2] hypothetical protein HMPREF9597_00384 [Propionibacterium acnes HL005PA4] hypothetical protein HMPREF9598_00543 [Propionibacterium acnes HL050PA1] hypothetical protein HMPREF9600_00943 [Propionibacterium acnes HL050PA3] hypothetical protein HMPREF9608_00112 [Propionibacterium acnes HL067PA1] hypothetical protein HMPREF9609_00393 [Propionibacterium acnes HL027PA1] hypothetical protein HMPREF9613_00128 [Propionibacterium acnes HL002PA1] hypothetical protein HMPREF9620_01344 [Propionibacterium acnes HL037PA1] hypothetical protein HMPREF9590_01552 [Propionibacterium acnes HL059PA2] hypothetical protein HMPREF9592_00773 [Propionibacterium acnes HL046PA1] hypothetical protein HMPREF9602_02400 [Propionibacterium acnes HL030PA2] hypothetical protein HMPREF9581_00063 [Propionibacterium acnes HL087PA3] hypothetical protein HMPREF9586_00034 [Propionibacterium acnes HL083PA2] hypothetical protein HMPREF9579_00035 [Propionibacterium acnes HL087PA1] hypothetical protein HMPREF9588_01110 [Propionibacterium acnes HL025PA2] # 43 98 1 56 56 100 98.0 5e-20 MRCPVSSVAQAGGCMSTGTSTKHLVLARLRRGRRDDAIEPCAVRTGRGMTTTGHCALRLM SQIPTPHNGVGLIVLAVVVVSSWLTPLDGRRTSWHGHG >gi|302034479|gb|GL383156.1| GENE 159 149069 - 149446 185 125 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90021194|ref|YP_527021.1| ribosomal protein L20 [Saccharophagus degradans 2-40] # 4 124 3 133 134 75 38 1e-12 MTLLCPCGSGRNLDQCCGPILDDPRHAETAEALMRSRYTANTLGRWNHLWATWHPRTRPD VVDSQGVEWTGLQILATKDGQPGDITGMVEFRASYRAGKRHNVLHEVSRFQRRAGRWMYV DGDVD >gi|302034479|gb|GL383156.1| GENE 160 149563 - 150603 812 346 aa, chain + ## HITS:1 COG:SPy0184_2 KEGG:ns NR:ns ## COG: SPy0184_2 COG2113 # Protein_GI_number: 15674389 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport systems, periplasmic components # Organism: Streptococcus pyogenes M1 GAS # 86 338 21 267 269 126 35.0 7e-29 MSHGVAAMAFLAGLIGLGLAGCSGTAGVYNSGDEAANGSRSGVEATPEAHAGATPDQKWT HCTPGARSKDITAMKPDTNTSLTIGAFNGWDESWATAGLIKQVLKKDGYTVTIKGFDAGV GYQATAGGDIDIITDSWLPVTQAGYIRKYGPKLENLGCWYDNAKLTIAVNKNSPAHSIAD LKKTGSAYGNVIYSIEPGAEMTKTIAHQTLPMYGLSSITLKTSSTPAMLAQLQKATKAGN NVAVTLWRPHWAYDAYPVRDLDDPKNAISNAELIYSFGRPGFEKDHPKAAQLIRNLAIDD AHLSSLEHLMVDTTKRGGQEDTAISRWMADNSDWVHDWLAGRLGSR >gi|302034479|gb|GL383156.1| GENE 161 150600 - 151403 587 267 aa, chain + ## HITS:1 COG:Cgl1208 KEGG:ns NR:ns ## COG: Cgl1208 COG0421 # Protein_GI_number: 19552458 # Func_class: E Amino acid transport and metabolism # Function: Spermidine synthase # Organism: Corynebacterium glutamicum # 4 251 33 289 314 126 34.0 3e-29 MSRLLPDPDVAGAWMVRVGDADQSWIDPDDPTRLEFDYMQRIADHLDVHRPAGERMRVIH LGGAGMCLARYVAATRPTSPQIVCEPDAELTAEVRLKAPLPVRSGIKVRPVDGRSGVAAM REDFADVVILDAFDGARVPGDLVTVEFFADVSRILHSDGIGVANLADSAPLVWTKRVVRS VKEVFSNVCMAAEPATLKGRRYGNIVLAASNGPLHEEDLTRRCSGAAVPFRFIAGDALAK LLADARPFHDGDTESSPGPPGGATFFS >gi|302034479|gb|GL383156.1| GENE 162 151506 - 152051 366 181 aa, chain + ## HITS:1 COG:no KEGG:PPA2015 NR:ns ## KEGG: PPA2015 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 181 1 181 181 322 100.0 3e-87 MTHTTSEGTVRYGYLPSLPGMPKLIVVARVIVIGLSTMWALIICGLWVAGRSESQSTLGP ILTSFALGMDSGGWTGYLLTPLAGCVLTVTMGRGHAIDRYLFTVLSLGWMWWLSRGAEFI GGFDVIGVMAVAVVLVIVWSAPVNTWIKAVAERDKVIANPPEEGWLAPGQVQPWQANSRR R >gi|302034479|gb|GL383156.1| GENE 163 152089 - 152817 171 242 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|154175107|ref|YP_001408238.1| ribosomal protein L22 [Campylobacter curvus 525.92] # 72 215 45 178 199 70 28 5e-11 MSSLLMTLPALLTPTWMDPQAIIQGTGAAALWIVALIAFAECGLAVFFMPGDSLLFALGM FAAVGVNSTVPLVHYGSVTTTLIIVNVVLIICAIAGNICGYWIGYLVGPKLFREREGFMG KVFSPKHVDTTHEFFRKHGSVALILARFVPIVRTFVTMIAGVGRMTFQKFITYTAIGGIL WVLIAVQAGYFLGQIPVVRNNFEAALLLIIVVSVLPMGVEWLKARRKGQVSQPQSARRSR VE >gi|302034479|gb|GL383156.1| GENE 164 152931 - 153521 426 196 aa, chain + ## HITS:1 COG:Cgl2714 KEGG:ns NR:ns ## COG: Cgl2714 COG0566 # Protein_GI_number: 19553964 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylases # Organism: Corynebacterium glutamicum # 4 188 14 198 206 234 61.0 1e-61 MPKPWPDDPRLDPELLASGDRRNVIDRYRYWTMEAIVADLDAQRSRLHVAIQNWEHDFNI GSVVRTANAFNVAAVHILGRRRWNRRGAMVTDRYLHVYHHSDVPSFLHWLDEHGVTPVGV DNLPGSVPLETVQLPQDCCLVFGSEGPGLTDEVVKGCEQLVAITQYGSTRSMNAGAAAAI AMYAWTTQWCPKPRTS >gi|302034479|gb|GL383156.1| GENE 165 153555 - 154145 324 196 aa, chain + ## HITS:1 COG:no KEGG:PPA2012 NR:ns ## KEGG: PPA2012 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 196 1 196 196 323 99.0 2e-87 MSTQPTEEPLRLVVAFNPVPSASRVAHHHATRFRLAVQAFIVVVIGGLLWALTADAFQLS MVMWMLGAWVVLFLVLFVIQNLRLHAARKDLLDVGEGPALIVCSRGLLLRRALRCESEGP VATSMDEVHWDDLSAVKVGGSSIGSGPGLVVYADDGRQWEVPLSWLDSRLADIDAAISTA SGGHVRVEQDGAGIAD >gi|302034479|gb|GL383156.1| GENE 166 154256 - 155281 1363 341 aa, chain + ## HITS:1 COG:ML0286 KEGG:ns NR:ns ## COG: ML0286 COG0191 # Protein_GI_number: 15827063 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Mycobacterium leprae # 1 341 1 344 345 459 66.0 1e-129 MPIATPEVYGEMIDRAKEQGFAYPAINVTSSQTLNAALQGFTEAGSDGIVQISTGGAEYA SGQTVKDMVTGAVALAEYAHVVAKNYPINVALHTDHCQKEKLDKYVNPLIAISQERVDKG QDPLFNSHMWDGSAIEVEENLQIAEELLSRTAKAKLILEIEVGAVGGEEDGVTGEINEKL YTTVADGMRTLEVLGLGEKGRYTTALTFGNVHGAYKPGYVKLRPGILKEIQDECGKKYGK EKPFDLVFHGGSGSTAQEIADAVSYGVIKMNIDTDTQYAFSRPVVEHMFKNYDGMLKIDG EVGNKKMYDPRSWGKKAEAGMAARIVEACEQLGSKGTSVSA >gi|302034479|gb|GL383156.1| GENE 167 155341 - 155586 240 81 aa, chain - ## HITS:1 COG:no KEGG:PPA2010 NR:ns ## KEGG: PPA2010 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 81 28 108 108 160 98.0 2e-38 MATYFAEAWGHAIFKAYNDDKAGLNEGILISDGPLPTRSSRSTGEPIMTVVMVPVNGKLL VDWNATVRANNSPLPPLPSHR >gi|302034479|gb|GL383156.1| GENE 168 156094 - 157452 1122 452 aa, chain + ## HITS:1 COG:PA1561_1 KEGG:ns NR:ns ## COG: PA1561_1 COG2202 # Protein_GI_number: 15596758 # Func_class: T Signal transduction mechanisms # Function: FOG: PAS/PAC domain # Organism: Pseudomonas aeruginosa # 1 148 1 143 195 101 38.0 3e-21 MSRPEPTGENRIVEPEEIFFSTTDAKGVIEKANSVFVDISRYSWDDLIGAPHNIIRHPMM PGAAFLAMWTTIKTGEPFCAYVHNLAADGATYTVLATVVPLGEGYLSVRVTPQVPEMLQA AETVYQAGRDAEWIAGEQGCGAPERARRGLDAVKTALEQAGYPDYGTFMRKALVQEVSVR RRQHRACRGMVDETTLGQLSSQVNRARQLVETWLETFDGLSDLSSKAGRTARTLSKAMTE SQRTADVITDSREATEASLRPLVTVLTLWSRMDAEIAPLVNGVVADLDAMATSADLTSFG LAVAHIQVESTRSFVSELWAEVDGWQRALPAIDDLSRAVEEAMSEANRRLDEVRDLADRA ASRTQELADLMAMPTALLTSWQQMASQRELSAGVADLVPRVEEQIGASQAMAAELTDVVA GLHKLADASNEELDVSVLAEIRRLGAEVAAGR >gi|302034479|gb|GL383156.1| GENE 169 157773 - 159266 1472 497 aa, chain + ## HITS:1 COG:TP0056_1 KEGG:ns NR:ns ## COG: TP0056_1 COG5016 # Protein_GI_number: 15639050 # Func_class: C Energy production and conversion # Function: Pyruvate/oxaloacetate carboxyltransferase # Organism: Treponema pallidum # 6 455 5 452 466 501 55.0 1e-141 MSPRKIGVTELVLRDAHQSLLATRMAMEDMVDACADIDAAGFWSVECWGGATFDSCIRFL NEDPWERLRTFRKLLPNSRLQMLLRGQNLLGYRHYNDEVVDKFVEKSAENGMDVFRVFDA LNDPRNLEHAMAAVKKTGKHAQGTICYTTSPIHTPESFVKQADRLIDMGADSIAFKDMAA LLKPQPAYDIIKGIKENHPDVQINLHCHSTTGVTLVTLQKAIEAGVDVVDTAISSMSLGP GHNPTESLVEMLEGTEYTTGLDMDRLLKIRDHFKKVRPKYKKFESKTLVNTNIFQSQIPG GMLSNMESQLEAQGAGDRMDEVMKEVPRVRKDAGYPPLVTPSSQIVGTQAVFNVLMGNGS YKNLTAEFADLMLGYYGKPIGELNPEIVEMAKKQTGKEPIDCRPADLLEPEWDQLVEQAK SLEGFDGSDEDVLTNALFPGVAPKFLKERAQGPKSVAMTEAQLKAEKEGTGAAGIAGPVN YNVTVGGNSHQVTVEPA >gi|302034479|gb|GL383156.1| GENE 170 159282 - 160856 1643 524 aa, chain + ## HITS:1 COG:TM0716 KEGG:ns NR:ns ## COG: TM0716 COG4799 # Protein_GI_number: 15643479 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) # Organism: Thermotoga maritima # 12 523 2 514 515 593 56.0 1e-169 MAEKKPIKLADTMAGRIEQLADERHAVELGGGEDRLQKQRDRGKQTARERIDNLVDAYSF DEVGAFRKHRTTLFGMDKAEVPADGVVTGRATIHGRPVHIASQDFTVMGGSAGETQSTKV VETMEQSLLTGTPFLFFYDSGGARIQEGIDSLSGYGKMFYANVKLSGVVPQIAIIAGPCA GGASYSPALTDFIIMTKKAHMFITGPGVIKSVTGEEVTADDLGGADAHMSTSGNIHFVAE DDDAAVLIAQKLLSFLPQNNTEDAQISNPNDDVSPQPELRDIVPLDGKKGYDVRDVISKI VDWGDYLEVKAGWATNIVTAFARVNGRTVGIVANQPKVMSGCLDINASDKAAEFITFCDS FNIPLVQLVDVPGFLPGVQQEYGGIIRHGAKMLYAYSEATVPKITVVLRKAYGGSYLAMC NRDLGADAVYAWPSAEIAVMGADGAANVIFRRQIKDSEDPAATRAAKIEEYRNAFNTPYV AAARGQVDDVIDPADTRRKITAALETYATKRQSRPAKKHGVMPC >gi|302034479|gb|GL383156.1| GENE 171 160883 - 161125 282 80 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5071 NR:ns ## KEGG: HMPREF0675_5071 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 80 1 80 80 137 100.0 1e-31 MSENNELVIETLNKRLAALEAEVSRLKKTSKGVPEDVLAAICAAVSAYLGNDGKVQAVRF APSETWVRQGRRAQQNHSIR >gi|302034479|gb|GL383156.1| GENE 172 161141 - 161497 389 118 aa, chain + ## HITS:1 COG:CAC2660 KEGG:ns NR:ns ## COG: CAC2660 COG1038 # Protein_GI_number: 15895918 # Func_class: C Energy production and conversion # Function: Pyruvate carboxylase # Organism: Clostridium acetobutylicum # 44 117 1070 1143 1144 69 48.0 2e-12 MKLKVTVNDVAYDVDVDKTANAPMAPILFGGGAGGPMKASGGGAGKAGEGEVPAPLAGTV AKILVAEGDAVKAGQVLLTLEAMKMETEINAPADGTVKGILVAVGDAVQGGQGLVALG >gi|302034479|gb|GL383156.1| GENE 173 161654 - 162190 505 178 aa, chain - ## HITS:1 COG:no KEGG:PPA2004 NR:ns ## KEGG: PPA2004 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 178 1 178 178 345 100.0 7e-94 MRSPRAASLAAALVMSLSAGVVGVANAEPTASPEPRQSSPAVASPATLPISNTGAHLDRR CMKGTVICASKKQRKLWMVHNGRILITLDARFGRASEPTAEGVHTIYWKDKNHVSSVYGS PMPYSMFFYRGQAIHYSSDFSRRGWNGASHGCINIRNMSGLKWLWNRTPTGRKVIVFK >gi|302034479|gb|GL383156.1| GENE 174 162366 - 164228 1953 620 aa, chain - ## HITS:1 COG:ML1498 KEGG:ns NR:ns ## COG: ML1498 COG1217 # Protein_GI_number: 15827789 # Func_class: T Signal transduction mechanisms # Function: Predicted membrane GTPase involved in stress response # Organism: Mycobacterium leprae # 7 608 3 615 628 751 62.0 0 MPVRKDLRNIAIVAHVDHGKTTLVDAMLWQSGAFREGAEVEKRVMDSMDLEREKGITILA KNTAVKHVMSDGEEITLNIIDTPGHADFGGEVERGLEMVDGVILLVDASEGPLPQTRFVL RKALAKKLPLILVLNKVDRSDARIDEVVEETYDLFMDLSDDDDASLLDVPVVYASAKAGR ASLNKPGDGELPDSPDLQPLFDCILENIPAPTYDEGGVLQAHVTNLDASPYLGRLALCRV VSGELTKGQTVAWCKRDGSVQNVKLSELLMTEALERVPAEKAGPGDIVAIAGIPEITIGE TLSDPENPVPLPLIHVDEPSMSMTIGINTSPLSGRSGDKLTARLLKARLDQELIGNVSIK VADTDRPDMWEVQGRGELQLAVLVEQMRREGFELTVGKPQVVTKTIDGKLHEPFERVTID APEEFMGPVTQMMGLRKGQMMHMVNHGSGWVRMEFVVPARGLIGFRTEFLTQTRGQGIMN QIFENFQPWVGELRTRQSGSMVADRQGVVTSYALFNLQERGTMFVSPGEDTYEGMVVGEN SRPDDMDVNPTKEKHLTNVRSSTGDELERLIPATKLSMEQQLEFCREDECLEVTPDVVRI RKTELNAHERAKARTRAKHS >gi|302034479|gb|GL383156.1| GENE 175 164361 - 164627 172 88 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5067 NR:ns ## KEGG: HMPREF0675_5067 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 35 88 1 54 54 100 100.0 2e-20 MIPSLGRNAPRRLFGPPIKPYDNKLVSAKERIITMCRPVRCGICGKTTWAGCGEHIAHVK AQVPPSQWCDGTHTTAEKTAAQSPHSRS >gi|302034479|gb|GL383156.1| GENE 176 164626 - 165153 393 175 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5066 NR:ns ## KEGG: HMPREF0675_5066 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 175 1 175 175 290 99.0 2e-77 MAEEQNTDLTTEIEGQDHGVRLPPDPAIRKLAKRGRGEFMTVVKEHPSSSLCWALLAEGS LLSDTDAADVAAYAYARTGRDLGLEQLRDAGWDGEGPVDWGYLPNQGVFRCLHALAMAAE RLGFGDESDDADTLLRELSNEAWQALRGDDVPSDNAVDVDVDEELADEQDSDHQE >gi|302034479|gb|GL383156.1| GENE 177 165281 - 166885 1613 534 aa, chain + ## HITS:1 COG:nanT KEGG:ns NR:ns ## COG: nanT COG0477 # Protein_GI_number: 16131114 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 13 516 20 484 506 423 49.0 1e-118 MSNVEAIAARKSWRDELTGTQWKSFWAAWIGYLLDGFDFVMITLVLTEIGRTFHVGPAAT ATLVSAAFIARWFGGLLLGAIGDRIGRKEAMVISILLYAGGSVVCAIAPAFWVIFVARVC IGMGMAGEYGSSATYVIESWPVRLRNKASGFLISGFSLGAGVTAQVYALIEYLTRGTSAE PHTWRILFALGIIPIALALWLRRALPEAADFVKMREEEAARAAVGETVKKTDMFTMLFAR NPKRSIINIVLALTTFGCLIVIYLFKSGVPGLVLALLWVVVAAVMVSFMVQFEGPRWPTG VAVMITVFVAFLYSWPLQALLPTYYRQTLGLASDTASNLVTATSFGAAAGCIMAGFIGDR FGTRKAYWVSLLISEFLVLPVFLVSRGMVHSSVIWVVLLGVFIFVQQMFGQGISGLLPKF ISNYFPVEKRAAGLGFSYNVGALGGAIAPVLGIALAGDPATGVGGVLPSSWGLGWTLFIL SFVFTAVIIVLIAINFPLRMQKLLRPDHVRPADRMDHVDEELAVSRNPDTIVAS >gi|302034479|gb|GL383156.1| GENE 178 166910 - 167812 576 300 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5064 NR:ns ## KEGG: HMPREF0675_5064 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 300 1 300 300 580 100.0 1e-164 MTAPTIVGAYAAMPRAIAERECLYRSLAETGWVDGIEIPYRDGLDADPRWLADQLRDRFA HCVVTAIPGTMGQLAGDPDFGLASSDEQGRQRALKWFTNLVDDVRTLHEMVGHPVVRWVE VHSAPSRKADAKAFASSLVELSGLFEDAGLAIVVEHCDAAGGVGPGEKEFLSLDDEITAV VGTRVHLTINWGRSVVESHDPELPARQVARLADAGVLGGVMLSGAGPDATQYGPAWGDAH LPLRNDEPTSLLTTDLVGSFLDAARGLQAYQGIKIQTPADATVERRLAMITSIHDVMATA >gi|302034479|gb|GL383156.1| GENE 179 167860 - 168780 946 306 aa, chain + ## HITS:1 COG:BMEII0862 KEGG:ns NR:ns ## COG: BMEII0862 COG0329 # Protein_GI_number: 17989207 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Brucella melitensis # 3 305 19 321 322 277 50.0 2e-74 MTTKFHGVIPPVVTPLTPNGDLDVASYEKLINRLIGQGVDGLFVLGSTSEVAFFDDEMRG RVLSEAKRIIDGRVPLLAGVIDTETLRVIRHIGQAEEIGVDAVVATAPFYAITGPTEIEN HFRALHEATDLPLFVYDIPVCVHVKVPVDLMMKLGREGVIAGCKDSSADDVSFRRLALAN RAAGSPLSLFTGHEVVVDGAFMSGADGVVPGLANVDATSYVAMYKAYREGDWETVRIEQD KAAELMEIAFAPQGVVGPAAGVGAFKTAMQLLGIIETNTMSVPLPTLTGDNVERVAEVLR RVGQLA >gi|302034479|gb|GL383156.1| GENE 180 168813 - 169502 633 229 aa, chain + ## HITS:1 COG:SP1330 KEGG:ns NR:ns ## COG: SP1330 COG3010 # Protein_GI_number: 15901184 # Func_class: G Carbohydrate transport and metabolism # Function: Putative N-acetylmannosamine-6-phosphate epimerase # Organism: Streptococcus pneumoniae TIGR4 # 6 229 8 233 233 169 39.0 3e-42 MSGFTDRIIASMAGGLVVSCQAYPGEPLRHPETMAQMAAAVEAGGAVAVRAQGLSDVSAV KGRVSVPVVGIWKEGDEGIYITPTLRHARCVSAAGADVVALDGTRRERADGLSLAETIER LKREYDVVVMADCGSVDDGLFAAEAGADLIGTTLCGYTGERPKTDGPDYEVIEALVKKLD GDRPVIAEGRIHTPDQARRAMDLGAHAVVVGTAITHPTSITGWFRDALR >gi|302034479|gb|GL383156.1| GENE 181 169627 - 170349 557 240 aa, chain - ## HITS:1 COG:BMEII0858 KEGG:ns NR:ns ## COG: BMEII0858 COG2186 # Protein_GI_number: 17989203 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Brucella melitensis # 19 231 20 227 242 85 28.0 6e-17 MSDTNDAVHLADNLNPAAERMFKWILSSDLAPGDPIPIEQDLATQFGMARGTVREAVREL RALGILEVRRGLGTYLSTASASTIRPSLVYRSVKQITTDESGTRDFIGLREMVEVRALME CSLVTEVTGRISAETGRALHALAARMDDPKDSAAADRQFHRLLYADMGNQLARELIDVFW DSLNLAGLMLPPTNTMPATRHAHDLIADCVIGHDPQASREAMWDHFAAIRERLGGAPRTS >gi|302034479|gb|GL383156.1| GENE 182 170479 - 171390 420 303 aa, chain + ## HITS:1 COG:no KEGG:PPA1995 NR:ns ## KEGG: PPA1995 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 303 23 325 325 577 100.0 1e-163 MSGHVVFRDMRPEDVKVITFGEPGSLIDRVDRPDVVARVALYENRIVGYAVSWLAVVHRT RRFIDVEVHPDSRGHRIGTRLVRQIQQRVDRPLATKAIAGSDAESFILSLGGEVYASCPP FELPRRHFGRAVEVLEGVSLGPGGAISGATLAPGVLETLWEQMYVWMHASWSPVDDSEAA HEALRQELEDLDSEATRVALVDGQPAAVAFVFVDENPTVVAETVQAGTPAGDNAVASAMS SVITWAEDAGYKRINFDGHRSDPHFGPLASRLPLEGASLNLMEISVLPADDAGDPADGGA TVA >gi|302034479|gb|GL383156.1| GENE 183 171558 - 172844 1129 428 aa, chain + ## HITS:1 COG:Cgl2708 KEGG:ns NR:ns ## COG: Cgl2708 COG0104 # Protein_GI_number: 19553958 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate synthase # Organism: Corynebacterium glutamicum # 1 427 1 427 430 543 61.0 1e-154 MPGIVVMGTQWGDEGKGKATDLMSERVDYCVRYSGGNNAGHTVVVDDEKFFMHLLPSGVL NPNSTAVLGNGVVLNLDVLADEIDALRGRGVDIPHPLISANAHLITPYHQTLDKVTERFL GSRRIGTTGRGIGPTYSDKINRMGIRVQDLFDESILRQKVEASLDEKNQILVKIYNRRAI DPGEVADGLLAHAERIRPYVVDVARVLNKGLDEGKVVLFEGAQAHHLDVDFGTYPYVTSS NPIAAGACTGSGVGPTRIDRIVGIAKAYTTRVGEGPFPTELCDDDGERLRSEGGEYGVTT KRPRRCGWFDALVVQQAVMINSVTDLFLTKLDVLTGWERIPVCVGYDIDGERTDITPVTQ SDLHHAKPVYEFLDGWSEDISTARSFDDLPRNCQAYVRRLEELVGTRVSGIGVGAGRDES VVINDLID >gi|302034479|gb|GL383156.1| GENE 184 172903 - 174222 727 439 aa, chain + ## HITS:1 COG:MT0796 KEGG:ns NR:ns ## COG: MT0796 COG0151 # Protein_GI_number: 15840187 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylamine-glycine ligase # Organism: Mycobacterium tuberculosis CDC1551 # 1 412 1 417 422 382 55.0 1e-106 MTVLVLGSGGREHALALACHRDPEVAAVHVAPGNPGTASFATNHPLDPCDCDAVVSLARG LEADLVVVGPEAPLVAGVADALRESGIDCFGPSAEAAQLEGSKAFAKEVMAAARVPTAAS RSCDDANSVSAALDEFGPPYVVKDDGLAGGKGVVVTHDRAEALAHAKRCFESDHRVVVEE YLDGPEVSLFAICDGTRALPMQPAQDFKRVGNGGVGPNTGGMGAYTPLPWAPDDLVETVS TTIISPTLRAMADRGTPFVGLLYVGLALTSAGPKVVEFNVRLGDPETEPLLSMVESPMAQ IMAAAARGDLSGVDGLRFRCGAAVGVVMASEGYPACPAKGRRVVAPVDDEDVLHAGTRIE GDGLVTSGGRVLVVLGHGETLAGARADAYRRIDQLEVSDGFHRTDIARHAAELEAVDEMA DGRAPQSENSTNLTDGESS >gi|302034479|gb|GL383156.1| GENE 185 174219 - 175652 1392 477 aa, chain + ## HITS:1 COG:Cgl2546 KEGG:ns NR:ns ## COG: Cgl2546 COG0015 # Protein_GI_number: 19553796 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate lyase # Organism: Corynebacterium glutamicum # 3 477 7 476 476 592 63.0 1e-169 MSVPNILATRYASAAMRSIWTPENKIRAERRLWLTVMEAQADLGVSFGGDDPEQVLADYQ AVLDDVDLDSIAEREAITRHDVKARIEEFNALAGHEHIHKGMTSRDLTENIEQMQVLESL RLVRDKMVATLNQLSRLAAQFSDQAIAGRSHNVAAQVTTLGKRFATAIDEMLVAWDHVNE LIERYPARGIKGPMGTAQDMLDLLGGDESKLDDLEHRVADHLGFNQVLTSTGQIYPRSLD FEVMSTLVQVLSGPSNLATSIRLMAGNELVTEGFKPGQVGSSAMPHKMNARSCERVNGFL VVLRGYLTMATGLAGVQWNEGDVSCSVVRRVALPDSFYAIDGAFETFLTILGDFGAFPAV IEAERERYLPFLTTTKVLMACVRAGVGREDAHEAIKEHAVAVALDMRETGRTGNDLFARL AADPRIPLTKEQLRGLVSSPLDLTGGAQDQVEALCAKVEDIVREYPKAANYLPGLVL >gi|302034479|gb|GL383156.1| GENE 186 175686 - 176630 513 314 aa, chain - ## HITS:1 COG:XF1532 KEGG:ns NR:ns ## COG: XF1532 COG0583 # Protein_GI_number: 15838133 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Xylella fastidiosa 9a5c # 1 300 15 314 325 179 36.0 7e-45 MNLHDLRYFVALAEEHHFGRAAASCGVSQPTLSTQIHRLENELGVVLAVRVGRRIEITPV GERIAQAARDMLVLSDDIRTMAREEADRMTLQLRVGVFPTLGPFVLPQVIARCDQHEPGV NIHIVEKRTAELLEAIRNGQLDVAAVAAPVNDDSLVTIPVFREEFLLVTGADDELAREER PINPHDVPTEGLILMSEGHCLRDQVLEVCSPSHPLPPDTLTAGSLETLRELVSVGAGRTL MPRSAISAPLHADPRIVVREFTHPRPHRDIVVAGRPATMHRPAVQTLTTILRQLPGDVVE PLGVAGASLCSHGM >gi|302034479|gb|GL383156.1| GENE 187 176637 - 178211 403 524 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 218 516 2 303 306 159 32 6e-38 MLDNALTTQLKTYLEMVREPIVLVPSPYRGDDAAKSSKSAHMDELLSEIAALSDKVSVGK PVDNERTPSFAITRPGSPIDIRFAGLPMGHEFTSLVLALLQVGGHPVKEEQSLIDAVRAV KGEHHFVTYMSLTCQNCPTVVQDLNAMAVLNPNIHHTAVDGGTHTNEVEAKGIASVPAIY LDGEDWGSGRMDMAEILERLDADAAQGAKEDLSQRDPYDVLVVGAGPAGAAAAVYAARKG IRTAMVGSRIGGQVLDTEAIDNLISVPHTTGPRLADALRSHVNDYNIDVIERQTASAIET TGGMTTVHLTDGDLRARSVIVATGARWRNLGVPGEKEYRTKGVTYCPHCDGPLFTGKKVA VVGGGNSGIEAAIDLAGVVDHVTVVEFLDALKADDVLLRTLNSLPNVDVITSARTTQILG DGSKVTGLEYEDRTSGDVKTIELAGVFVQIGLLPNTEWLEGALERNQRGEIVIDERGTTS APGIFAAGDCTTQPYKQIIISMGAGATAALGAFDHLIRQNPTQN >gi|302034479|gb|GL383156.1| GENE 188 178309 - 178872 770 187 aa, chain - ## HITS:1 COG:STM0608 KEGG:ns NR:ns ## COG: STM0608 COG0450 # Protein_GI_number: 16763985 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Salmonella typhimurium LT2 # 1 187 1 187 187 295 71.0 4e-80 MSLINTKILPFKANAFRNGDFIEVSDSDINGKWAVFFFYPGDFTFVCPTELGDLADHYEE LQAMGVEVFSVSTDSHFVHKAWHADSDTVGKVNYTMIGDPNLQLTRNFDVEREGAGQADR ATFLVDPDGIIQFYELTAEGIGRNATELVRKVKAAQYIYTHPGEVCPAKWEEGDETLAPS IDLVGKI >gi|302034479|gb|GL383156.1| GENE 189 178862 - 179140 126 92 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRLMGVLSRRRCDRSRLSLNIVSIANNYKDRELGTLCVARARTRGMMPPWSLRTSIFHCW LRARSDASIVFPISRAACLWSLRTGLAPTTTS >gi|302034479|gb|GL383156.1| GENE 190 179008 - 180270 998 420 aa, chain + ## HITS:1 COG:Cgl2543 KEGG:ns NR:ns ## COG: Cgl2543 COG0152 # Protein_GI_number: 19553793 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase # Organism: Corynebacterium glutamicum # 11 285 11 286 297 283 53.0 3e-76 MVTSHLNLPLLAEGKVRRLYRLPDQPGRLLMVATDRISAYDHVLTPDVPGKGAILTNMSL WWFDQLADIVDNHLVSVDVPAEVAGRAMVVEELDMFPVECVVRGYLTGSGWAEYQRNQAV CGIRLPEGLQNGSRLEEPIFTPAIKAPQGEHDENIDYLRLVELVGPDVAAQLHDLSLRVY QRAEEIARKRGILLADTKFEFGRRVDGTIVLADEVLTPDSSRFWDAETWQPGKGADSFDK QYVRDWLTNESGWDRASDQEPPALPEEVVKATSRRYEEAWARLTGGHVSDEVSDETPHNE ADDDKHARASRDSVSGESGDAAPVALDVPGESESCSADKIGAMSRVVVEVMPKPEILDPQ GKAITSVLARLGHDGLTVRQGKRFEITGEGLEDRLDEIRQVASELLANTVIESFDVHVED >gi|302034479|gb|GL383156.1| GENE 191 180273 - 180947 485 224 aa, chain + ## HITS:1 COG:Cgl2535 KEGG:ns NR:ns ## COG: Cgl2535 COG0047 # Protein_GI_number: 19553785 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain # Organism: Corynebacterium glutamicum # 3 222 4 223 223 254 60.0 9e-68 MVRIGVVTFPGTLDDQDAARAVRLAGAEPVSLWYASTDLAGVDAVILPGGFSYGDYLRAG ALAAASPVMSSIRRAVDGGLPVLGICNGFQVLCESHLLPGTLMRNEKRRFHCSVQQLQVA SVDTVWTCDFRPSERIHIAAKHGEGNYVADAATVAALEANNRVVFRYTANPNGSVHDIAG ITNEAGNVVGLMPHPEHSVEELTGAGTDGLGFFRSLMTFLSAQL >gi|302034479|gb|GL383156.1| GENE 192 181025 - 181978 656 317 aa, chain - ## HITS:1 COG:alr4655 KEGG:ns NR:ns ## COG: alr4655 COG2971 # Protein_GI_number: 17232147 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted N-acetylglucosamine kinase # Organism: Nostoc sp. PCC 7120 # 87 242 96 251 320 83 34.0 4e-16 MNDAVCSDSSPVLAVDAGQSSTRVRCEPGPWGPGWIVTSSGVRTALPLAQQFATIMHDVA TAHPEITQSECTVAIGSSGARDDEDPIPVLHALKPFGVSRVLLAHDSITSYLGALGDQLG VVTASGTGVITLAVGRHNVARVDGWGYIIGDAGSAFWLGRHGLDAVMRAHDGRGEPTVLS HTIGNDFDDIEAAYLELHADPLMVSRIAAYSATVTAAAEEGDHVSRDICVRAAHELAHST VTGLRQTELTDADSPAVGLLGGVMKSQLIHTAITREISAAMPGARIVEPLGEGLDGAAAL PTVSPESPLGQRIHVAQ >gi|302034479|gb|GL383156.1| GENE 193 182342 - 182623 174 93 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5050 NR:ns ## KEGG: HMPREF0675_5050 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 93 15 107 107 134 100.0 2e-30 MSSLAGVLMGSMEYFLTSLRFASSKEKLIHYLILIVVFSLTGWILGTIGTIIKDDGHRFL IKMSIATAVALFTSVAVWFFVFSFIRVAFFFEF Prediction of potential genes in microbial genomes Time: Wed Jul 20 19:36:50 2011 Seq name: gi|302034478|gb|GL383157.1| Propionibacterium acnes HL005PA4 genomic scaffold Scfld5, whole genome shotgun sequence Length of sequence - 682204 bp Number of predicted genes - 672, with homology - 644 Number of transcription units - 336, operones - 160 average op.length - 3.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 819 443 ## COG0686 Alanine dehydrogenase - Term 829 - 866 -0.1 2 2 Tu 1 . - CDS 993 - 2000 485 ## COG1522 Transcriptional regulators + Prom 2009 - 2068 1.8 3 3 Op 1 . + CDS 2294 - 3337 937 ## COG3804 Uncharacterized conserved protein related to dihydrodipicolinate reductase 4 3 Op 2 . + CDS 3349 - 3696 195 ## HMPREF0675_5354 hypothetical protein 5 3 Op 3 . + CDS 3693 - 5114 1253 ## COG0498 Threonine synthase 6 3 Op 4 . + CDS 5114 - 5536 373 ## HMPREF0675_5356 hypothetical protein 7 3 Op 5 . + CDS 5533 - 7494 1795 ## PPA2280 D-ornithine aminomutase E component 8 3 Op 6 . + CDS 7576 - 7851 344 ## COG5012 Predicted cobalamin binding protein 9 3 Op 7 . + CDS 7857 - 9287 1052 ## HMPREF0675_5358 putative reactivating factor for D-ornithine aminomutase (EC:5.4.99.1) 10 3 Op 8 . + CDS 9284 - 10372 807 ## COG3457 Predicted amino acid racemase 11 3 Op 9 3/0.045 + CDS 10411 - 11886 1170 ## COG1113 Gamma-aminobutyrate permease and related permeases + Prom 12104 - 12163 3.3 12 4 Tu 1 . + CDS 12250 - 13764 992 ## COG1113 Gamma-aminobutyrate permease and related permeases + Term 13776 - 13828 3.2 13 5 Tu 1 . + CDS 13991 - 15118 721 ## COG0787 Alanine racemase 14 6 Tu 1 1/0.121 - CDS 15308 - 16732 1132 ## COG1109 Phosphomannomutase 15 7 Op 1 . - CDS 16849 - 18039 796 ## COG0153 Galactokinase 16 7 Op 2 . - CDS 18036 - 18872 763 ## COG1209 dTDP-glucose pyrophosphorylase - Prom 18943 - 19002 1.7 17 8 Tu 1 . + CDS 18997 - 19824 229 ## HMPREF0675_5366 hypothetical protein - Term 19669 - 19712 -0.5 18 9 Op 1 . - CDS 19830 - 20009 66 ## PPA2290 hypothetical protein 19 9 Op 2 . - CDS 20018 - 20920 279 ## HMPREF0675_5367 hypothetical protein + Prom 20900 - 20959 2.3 20 10 Tu 1 . + CDS 21170 - 22576 1240 ## COG0114 Fumarase + Term 22597 - 22648 20.3 21 11 Op 1 . - CDS 22555 - 22797 90 ## HMPREF0675_5369 hypothetical protein 22 11 Op 2 38/0.000 - CDS 22797 - 23708 750 ## COG0395 ABC-type sugar transport system, permease component 23 11 Op 3 . - CDS 23710 - 24603 651 ## COG1175 ABC-type sugar transport systems, permease components 24 12 Tu 1 . + CDS 24497 - 24703 70 ## - Term 24765 - 24820 -0.7 25 13 Tu 1 . - CDS 24841 - 26175 1316 ## HMPREF0675_5372 bacterial extracellular solute-binding protein - Prom 26278 - 26337 2.3 26 14 Tu 1 . + CDS 26374 - 27381 567 ## COG1609 Transcriptional regulators 27 15 Op 1 . - CDS 27390 - 28082 492 ## HMPREF0675_5374 hypothetical protein 28 15 Op 2 . - CDS 28042 - 28257 94 ## gi|327334474|gb|EGE76185.1| hypothetical protein HMPREF9344_00337 29 16 Tu 1 . + CDS 28208 - 29065 739 ## COG0668 Small-conductance mechanosensitive channel + Term 29190 - 29223 4.2 30 17 Tu 1 . - CDS 29235 - 30443 764 ## COG1929 Glycerate kinase + Prom 30443 - 30502 1.7 31 18 Tu 1 . + CDS 30533 - 30748 172 ## HMPREF0675_5377 hypothetical protein 32 19 Tu 1 . + CDS 30854 - 32353 1189 ## COG0617 tRNA nucleotidyltransferase/poly(A) polymerase - Term 32307 - 32344 3.5 33 20 Tu 1 . - CDS 32350 - 32574 126 ## gi|313765088|gb|EFS36452.1| hypothetical protein HMPREF9567_00727 34 21 Op 1 . + CDS 32456 - 34537 1114 ## HMPREF0675_5379 hypothetical protein 35 21 Op 2 . + CDS 34611 - 36416 666 ## COG0515 Serine/threonine protein kinase 36 22 Tu 1 . - CDS 36766 - 38289 1680 ## COG0554 Glycerol kinase 37 23 Tu 1 . + CDS 38261 - 38392 66 ## 38 24 Tu 1 . - CDS 38374 - 39126 875 ## COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) + Prom 39145 - 39204 2.3 39 25 Tu 1 . + CDS 39315 - 40262 670 ## COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain + Term 40281 - 40330 8.4 - Term 40267 - 40314 11.0 40 26 Op 1 . - CDS 40333 - 41748 815 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 41 26 Op 2 . - CDS 41876 - 42547 302 ## COG3534 Alpha-L-arabinofuranosidase 42 27 Tu 1 . + CDS 42680 - 43732 662 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 - Term 44143 - 44183 0.1 43 28 Tu 1 . - CDS 44215 - 45027 520 ## COG0564 Pseudouridylate synthases, 23S RNA-specific + Prom 45309 - 45368 1.7 44 29 Op 1 1/0.121 + CDS 45429 - 46676 969 ## COG0477 Permeases of the major facilitator superfamily 45 29 Op 2 . + CDS 46678 - 47607 725 ## COG0657 Esterase/lipase - Term 47693 - 47722 -0.1 46 30 Op 1 . - CDS 47731 - 48168 351 ## HMPREF0675_5391 OsmC-like protein 47 30 Op 2 . - CDS 48178 - 48504 434 ## COG0526 Thiol-disulfide isomerase and thioredoxins - Prom 48632 - 48691 2.1 48 31 Tu 1 . + CDS 48491 - 48706 140 ## gi|327448789|gb|EGE95443.1| hypothetical protein HMPREF9570_00352 49 32 Tu 1 . - CDS 48745 - 49812 962 ## COG0240 Glycerol-3-phosphate dehydrogenase 50 33 Op 1 . - CDS 50012 - 50344 69 ## COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain 51 33 Op 2 . - CDS 50223 - 50813 157 ## COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain 52 33 Op 3 . - CDS 50823 - 52886 1926 ## COG0021 Transketolase 53 34 Op 1 . - CDS 53023 - 54732 1296 ## COG1069 Ribulose kinase 54 34 Op 2 . - CDS 54805 - 56169 1201 ## COG0371 Glycerol dehydrogenase and related enzymes 55 34 Op 3 . - CDS 56153 - 57757 1205 ## COG1069 Ribulose kinase 56 34 Op 4 . - CDS 57814 - 58671 731 ## COG0647 Predicted sugar phosphatases of the HAD superfamily 57 34 Op 5 . - CDS 58694 - 59773 1131 ## PPA2323 hypothetical protein 58 35 Tu 1 . - CDS 59917 - 60399 517 ## COG0698 Ribose 5-phosphate isomerase RpiB - Prom 60468 - 60527 4.0 59 36 Op 1 1/0.121 - CDS 60616 - 61134 312 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 60 36 Op 2 . - CDS 61186 - 61992 502 ## COG1349 Transcriptional regulators of sugar metabolism 61 37 Op 1 7/0.000 - CDS 62266 - 63333 846 ## COG1312 D-mannonate dehydratase 62 37 Op 2 3/0.045 - CDS 63342 - 64931 971 ## COG0246 Mannitol-1-phosphate/altronate dehydrogenases 63 37 Op 3 2/0.076 - CDS 64947 - 66359 806 ## COG1904 Glucuronate isomerase 64 37 Op 4 . - CDS 66424 - 67431 618 ## COG1609 Transcriptional regulators - Prom 67584 - 67643 1.8 + Prom 67508 - 67567 1.6 65 38 Op 1 3/0.045 + CDS 67608 - 69032 1322 ## COG2211 Na+/melibiose symporter and related transporters 66 38 Op 2 . + CDS 69052 - 71544 1578 ## COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases 67 38 Op 3 . + CDS 71577 - 73358 1208 ## COG3250 Beta-galactosidase/beta-glucuronidase 68 38 Op 4 . + CDS 73462 - 76863 2760 ## HMPREF0675_5414 hypothetical protein + Term 76868 - 76914 9.7 - Term 76969 - 77015 -0.9 69 39 Op 1 . - CDS 77076 - 77321 98 ## 70 39 Op 2 . - CDS 77357 - 77686 107 ## 71 39 Op 3 . - CDS 77777 - 78016 217 ## PPA2336 hypothetical protein + Prom 78366 - 78425 1.7 72 40 Tu 1 . + CDS 78658 - 80004 877 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 73 41 Op 1 . + CDS 80299 - 81282 657 ## COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes 74 41 Op 2 . + CDS 81275 - 81991 308 ## PPA2339 membrane-associated protein 75 41 Op 3 . + CDS 82003 - 82560 410 ## HMPREF0675_5419 hypothetical protein + Term 82760 - 82817 4.5 76 42 Op 1 25/0.000 - CDS 82818 - 83738 603 ## COG1475 Predicted transcriptional regulators 77 42 Op 2 . - CDS 83741 - 84727 207 ## COG1192 ATPases involved in chromosome partitioning - Prom 84779 - 84838 2.9 78 43 Op 1 . + CDS 85932 - 86297 70 ## PPA2371 hypothetical protein 79 43 Op 2 . + CDS 86294 - 86524 67 ## PPA2343 hypothetical protein - Term 86302 - 86355 0.7 80 44 Tu 1 . - CDS 86554 - 87180 441 ## COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division 81 45 Tu 1 . + CDS 87477 - 87689 87 ## gi|313771078|gb|EFS37044.1| hypothetical protein HMPREF9574_02595 + Term 87765 - 87804 2.3 82 46 Tu 1 . - CDS 87626 - 87826 115 ## PPA2345 hypothetical protein - Prom 88000 - 88059 2.4 83 47 Tu 1 . + CDS 88499 - 88936 65 ## PPA2372 hypothetical protein 84 48 Op 1 . - CDS 89166 - 90194 682 ## HMPREF0675_5425 alanine racemase, N-terminal domain protein 85 48 Op 2 . - CDS 90196 - 91323 966 ## COG2348 Uncharacterized protein involved in methicillin resistance - Term 91479 - 91523 13.5 86 49 Op 1 16/0.000 - CDS 91533 - 92144 603 ## COG1847 Predicted RNA-binding protein 87 49 Op 2 18/0.000 - CDS 92197 - 93276 1075 ## COG0706 Preprotein translocase subunit YidC 88 49 Op 3 . - CDS 93276 - 93752 206 ## COG0759 Uncharacterized conserved protein 89 49 Op 4 . - CDS 93749 - 94195 148 ## HMPREF0675_5431 ribonuclease P protein component (EC:3.1.26.5) 90 49 Op 5 . - CDS 94202 - 94336 215 ## PROTEIN SUPPORTED gi|50843793|ref|YP_057020.1| 50S ribosomal protein L34 - Prom 94444 - 94503 1.8 + Prom 94488 - 94547 1.8 91 50 Tu 1 . + CDS 94696 - 96198 1687 ## COG0593 ATPase involved in DNA replication initiation 92 51 Tu 1 . - CDS 96243 - 96482 69 ## 93 52 Tu 1 . + CDS 96493 - 97830 1069 ## COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) 94 53 Op 1 . + CDS 97967 - 98620 235 ## HMPREF0675_3002 hypothetical protein 95 53 Op 2 5/0.015 + CDS 98678 - 99862 670 ## COG1195 Recombinational DNA repair ATPase (RecF pathway) 96 53 Op 3 . + CDS 99855 - 100448 231 ## COG5512 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives + Term 100456 - 100511 17.5 97 54 Op 1 . - CDS 100512 - 101078 179 ## COG1132 ABC-type multidrug transport system, ATPase and permease components 98 54 Op 2 . - CDS 100939 - 101598 318 ## HMPREF0675_3006 hypothetical protein 99 54 Op 3 . - CDS 101611 - 101961 325 ## HMPREF0675_3006 hypothetical protein 100 55 Tu 1 . - CDS 102369 - 102596 91 ## - Prom 102739 - 102798 1.8 101 56 Op 1 . + CDS 102595 - 102804 78 ## 102 56 Op 2 . + CDS 102755 - 103942 848 ## COG1482 Phosphomannose isomerase - Term 103789 - 103817 0.6 103 57 Tu 1 . - CDS 103841 - 104041 86 ## 104 58 Op 1 24/0.000 + CDS 104184 - 106256 2120 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 105 58 Op 2 . + CDS 106298 - 108973 2413 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 106 58 Op 3 . + CDS 108966 - 109598 522 ## PPA0011 hypothetical protein 107 59 Tu 1 . - CDS 109697 - 110665 837 ## COG0039 Malate/lactate dehydrogenases 108 60 Tu 1 . - CDS 110938 - 111135 207 ## gi|313765011|gb|EFS36375.1| hypothetical protein HMPREF9567_00650 + Prom 111041 - 111100 1.7 109 61 Op 1 2/0.076 + CDS 111183 - 112190 704 ## COG1609 Transcriptional regulators 110 61 Op 2 21/0.000 + CDS 112187 - 113692 990 ## COG1129 ABC-type sugar transport system, ATPase component 111 61 Op 3 16/0.000 + CDS 113775 - 114752 1020 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 112 61 Op 4 8/0.000 + CDS 114801 - 115742 994 ## COG1879 ABC-type sugar transport system, periplasmic component 113 61 Op 5 6/0.000 + CDS 115739 - 116668 665 ## COG0524 Sugar kinases, ribokinase family 114 61 Op 6 . + CDS 116665 - 117048 300 ## COG1869 ABC-type ribose transport system, auxiliary component + Term 117116 - 117151 -0.7 + TRNA 117143 - 117216 92.1 # Ile GAT 0 0 + Prom 117143 - 117202 76.7 115 62 Tu 1 . + CDS 117276 - 117500 110 ## PPA0020 hypothetical protein - Term 117551 - 117616 4.8 116 63 Op 1 . - CDS 117652 - 118128 440 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 117 63 Op 2 10/0.000 - CDS 118185 - 119441 1154 ## COG3775 Phosphotransferase system, galactitol-specific IIC component 118 63 Op 3 1/0.121 - CDS 119462 - 119764 324 ## COG3414 Phosphotransferase system, galactitol-specific IIB component 119 63 Op 4 . - CDS 119754 - 120137 270 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases + Prom 120517 - 120576 1.6 120 64 Tu 1 . + CDS 120598 - 122304 761 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) + Prom 122396 - 122455 2.8 121 65 Tu 1 . + CDS 122565 - 122906 89 ## gi|314917509|gb|EFS81340.1| hypothetical protein HMPREF9598_02046 122 66 Tu 1 . - CDS 122877 - 123092 97 ## PPA2391 hypothetical protein 123 67 Tu 1 . + CDS 123278 - 123454 106 ## HMPREF0675_3027 hypothetical protein + Term 123618 - 123650 -1.0 124 68 Tu 1 . - CDS 123762 - 124103 223 ## PPA0029 hypothetical protein 125 69 Op 1 . - CDS 124456 - 125100 283 ## COG0637 Predicted phosphatase/phosphohexomutase 126 69 Op 2 . - CDS 125087 - 125335 88 ## gi|313826226|gb|EFS63940.1| hypothetical protein HMPREF9611_00524 127 70 Tu 1 . + CDS 125217 - 125975 349 ## COG1349 Transcriptional regulators of sugar metabolism + Term 126063 - 126118 6.9 128 71 Tu 1 . + CDS 126197 - 126370 61 ## 129 72 Tu 1 . + CDS 126487 - 126591 66 ## PPA2392 hypothetical protein 130 73 Op 1 . - CDS 126597 - 127334 457 ## HMPREF0675_3034 hypothetical protein 131 73 Op 2 . - CDS 127328 - 127852 299 ## PPA0033 hypothetical protein 132 73 Op 3 . - CDS 127831 - 128088 148 ## gi|328756045|gb|EGF69661.1| hypothetical protein HMPREF9579_00532 133 74 Tu 1 . + CDS 128001 - 129059 857 ## COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase - Term 129005 - 129048 -0.5 134 75 Tu 1 . - CDS 129063 - 129941 757 ## COG4667 Predicted esterase of the alpha-beta hydrolase superfamily 135 76 Op 1 . + CDS 129993 - 130559 461 ## PROTEIN SUPPORTED gi|239918508|ref|YP_002958066.1| acetyltransferase, ribosomal protein N-acetylase 136 76 Op 2 . + CDS 130573 - 131232 379 ## HMPREF0675_3038 hypothetical protein + Prom 131236 - 131295 1.7 137 77 Op 1 . + CDS 131485 - 132123 272 ## HMPREF0675_3039 SAF domain protein 138 77 Op 2 . + CDS 132123 - 132941 408 ## PPA0040 hypothetical protein 139 77 Op 3 . + CDS 132938 - 134416 677 ## COG4962 Flp pilus assembly protein, ATPase CpaF 140 77 Op 4 . + CDS 134407 - 135288 338 ## HMPREF0675_3042 type II secretion system F domain protein 141 77 Op 5 . + CDS 135281 - 136183 648 ## HMPREF0675_3043 type II secretion system F domain protein 142 77 Op 6 . + CDS 136253 - 136465 154 ## HMPREF0675_3044 hypothetical protein 143 77 Op 7 . + CDS 136534 - 136842 179 ## PPA0044 hypothetical protein 144 78 Op 1 . + CDS 136992 - 137348 162 ## HMPREF0675_3046 hypothetical protein 145 78 Op 2 . + CDS 137345 - 140107 952 ## HMPREF0675_3047 LysM domain protein + Term 140137 - 140174 -0.6 - Term 140040 - 140078 1.1 146 79 Op 1 . - CDS 140161 - 141504 1183 ## COG0477 Permeases of the major facilitator superfamily 147 79 Op 2 . - CDS 141435 - 141680 77 ## 148 80 Tu 1 . + CDS 141874 - 143583 1503 ## COG2759 Formyltetrahydrofolate synthetase 149 81 Tu 1 . + CDS 143689 - 144102 355 ## HMPREF0675_3050 hypothetical protein 150 82 Op 1 . - CDS 144099 - 144620 451 ## HMPREF0675_3051 hypothetical protein 151 82 Op 2 . - CDS 144645 - 145319 393 ## PPA0052 hypothetical protein - Term 145454 - 145493 11.2 152 83 Op 1 36/0.000 - CDS 145517 - 147988 1763 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 153 83 Op 2 . - CDS 147988 - 149022 262 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 154 84 Op 1 . - CDS 149130 - 149786 536 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 155 84 Op 2 . - CDS 149805 - 150353 283 ## PPA0056 hypothetical protein 156 85 Op 1 38/0.000 - CDS 150489 - 151319 655 ## COG0395 ABC-type sugar transport system, permease component 157 85 Op 2 35/0.000 - CDS 151316 - 152281 843 ## COG1175 ABC-type sugar transport systems, permease components 158 85 Op 3 . - CDS 152297 - 153601 1347 ## COG1653 ABC-type sugar transport system, periplasmic component - Prom 153765 - 153824 2.7 - Term 153791 - 153847 2.2 159 86 Tu 1 . - CDS 153933 - 154172 117 ## 160 87 Op 1 1/0.121 + CDS 154053 - 154706 459 ## COG1349 Transcriptional regulators of sugar metabolism 161 87 Op 2 . + CDS 154703 - 156091 1299 ## COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases 162 87 Op 3 . + CDS 156084 - 159212 1746 ## COG0383 Alpha-mannosidase 163 87 Op 4 . + CDS 159209 - 160264 900 ## COG1524 Uncharacterized proteins of the AP superfamily 164 87 Op 5 . + CDS 160258 - 160902 470 ## COG0637 Predicted phosphatase/phosphohexomutase 165 88 Tu 1 . + CDS 161055 - 162194 763 ## COG3538 Uncharacterized conserved protein 166 89 Tu 1 . - CDS 162178 - 163716 817 ## COG3525 N-acetyl-beta-hexosaminidase 167 90 Tu 1 . + CDS 163822 - 164757 554 ## COG0524 Sugar kinases, ribokinase family + Term 164803 - 164844 0.9 168 91 Tu 1 . - CDS 164776 - 166146 1048 ## COG4585 Signal transduction histidine kinase 169 92 Tu 1 . + CDS 166326 - 167315 1008 ## COG1087 UDP-glucose 4-epimerase 170 93 Tu 1 . - CDS 167388 - 168020 621 ## PPA0070 transcriptional regulator - Prom 168070 - 168129 2.0 171 94 Op 1 . + CDS 168140 - 170869 2088 ## COG2409 Predicted drug exporters of the RND superfamily 172 94 Op 2 . + CDS 170869 - 173235 1812 ## COG1511 Predicted membrane protein 173 95 Op 1 . - CDS 173421 - 174866 967 ## PPA0073 hypothetical protein 174 95 Op 2 . - CDS 174869 - 175621 275 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 175 96 Tu 1 . + CDS 175836 - 176705 443 ## COG0500 SAM-dependent methyltransferases + Prom 176773 - 176832 2.7 176 97 Op 1 33/0.000 + CDS 176926 - 177954 894 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 177 97 Op 2 35/0.000 + CDS 177935 - 179104 618 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 178 97 Op 3 . + CDS 179097 - 179864 179 ## PROTEIN SUPPORTED gi|225088774|ref|YP_002660041.1| ribosomal protein S16 179 97 Op 4 . + CDS 179947 - 181404 1495 ## COG1012 NAD-dependent aldehyde dehydrogenases 180 97 Op 5 . + CDS 181449 - 182735 705 ## COG0038 Chloride channel protein EriC 181 97 Op 6 . + CDS 182790 - 185156 2687 ## COG0058 Glucan phosphorylase + Term 185215 - 185245 -0.1 182 98 Op 1 . - CDS 185221 - 185613 468 ## HMPREF0675_3082 hypothetical protein 183 98 Op 2 . - CDS 185598 - 186233 364 ## PPA0082 hypothetical protein - Prom 186273 - 186332 3.4 184 99 Tu 1 . + CDS 186168 - 186506 133 ## 185 100 Tu 1 . - CDS 186421 - 188637 1606 ## PPA0083 hypothetical protein - Prom 188668 - 188727 5.3 - Term 188667 - 188702 -0.9 186 101 Tu 1 . - CDS 188767 - 189978 476 ## COG1940 Transcriptional regulator/sugar kinase - Prom 190002 - 190061 1.9 + Prom 190201 - 190260 1.8 187 102 Op 1 35/0.000 + CDS 190335 - 191678 1155 ## COG1653 ABC-type sugar transport system, periplasmic component + Term 191681 - 191729 0.6 188 102 Op 2 38/0.000 + CDS 191779 - 192657 787 ## COG1175 ABC-type sugar transport systems, permease components 189 102 Op 3 . + CDS 192657 - 193538 812 ## COG0395 ABC-type sugar transport system, permease component 190 102 Op 4 . + CDS 193555 - 193731 174 ## gi|289424703|ref|ZP_06426486.1| hypothetical protein HMPREF1034_1734 191 102 Op 5 . + CDS 193733 - 194797 593 ## COG1609 Transcriptional regulators 192 102 Op 6 . + CDS 194787 - 195440 232 ## PPA0089 glycosyl hydrolase family protein 193 103 Tu 1 . + CDS 195563 - 196975 611 ## HMPREF0675_3092 hypothetical protein 194 104 Tu 1 . + CDS 197335 - 198462 1144 ## COG0205 6-phosphofructokinase - Term 198388 - 198444 -0.6 195 105 Op 1 . - CDS 198500 - 199081 295 ## COG2345 Predicted transcriptional regulator 196 105 Op 2 . - CDS 199078 - 201819 1761 ## COG2132 Putative multicopper oxidases 197 105 Op 3 . - CDS 201812 - 202945 820 ## PPA0093 hypothetical protein - Prom 203188 - 203247 2.3 + Prom 203079 - 203138 2.9 198 106 Op 1 4/0.045 + CDS 203375 - 204847 1238 ## COG1027 Aspartate ammonia-lyase 199 106 Op 2 . + CDS 204854 - 206152 785 ## COG2704 Anaerobic C4-dicarboxylate transporter + Term 206269 - 206309 2.5 - Term 206183 - 206242 22.3 200 107 Op 1 . - CDS 206253 - 206543 276 ## COG2388 Predicted acetyltransferase 201 107 Op 2 . - CDS 206551 - 206790 96 ## gi|332674497|gb|AEE71313.1| hypothetical protein PAZ_c01040 202 108 Tu 1 . + CDS 206672 - 208123 1508 ## COG0753 Catalase 203 109 Op 1 35/0.000 - CDS 208161 - 209906 1212 ## COG1132 ABC-type multidrug transport system, ATPase and permease components 204 109 Op 2 . - CDS 209903 - 211531 1066 ## COG1132 ABC-type multidrug transport system, ATPase and permease components 205 110 Op 1 . - CDS 211666 - 212652 773 ## COG1239 Mg-chelatase subunit ChlI 206 110 Op 2 1/0.121 - CDS 212654 - 214618 1056 ## COG1239 Mg-chelatase subunit ChlI 207 110 Op 3 . - CDS 214618 - 218523 2802 ## COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatases 208 110 Op 4 . - CDS 218520 - 219614 293 ## COG0641 Arylsulfatase regulator (Fe-S oxidoreductase) 209 110 Op 5 35/0.000 - CDS 219611 - 220612 682 ## COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 210 110 Op 6 33/0.000 - CDS 220609 - 221541 782 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 211 110 Op 7 8/0.000 - CDS 221831 - 223075 1177 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 212 110 Op 8 . - CDS 223132 - 224382 1238 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 213 110 Op 9 . - CDS 224397 - 224627 127 ## gi|328758508|gb|EGF72124.1| conserved domain protein 214 110 Op 10 . - CDS 224684 - 225457 553 ## PPA0108 hypothetical protein 215 110 Op 11 . - CDS 225497 - 227281 1862 ## COG4716 Myosin-crossreactive antigen - Prom 227341 - 227400 2.2 216 111 Tu 1 . + CDS 227400 - 229109 1167 ## COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 217 112 Op 1 . + CDS 229233 - 229463 134 ## PPA0111 hypothetical protein 218 112 Op 2 . + CDS 229472 - 230125 473 ## COG0352 Thiamine monophosphate synthase + Term 230184 - 230229 6.0 219 113 Tu 1 . - CDS 230383 - 231342 576 ## PPA0113 hypothetical protein 220 114 Op 1 . + CDS 231712 - 231903 69 ## PPA0114 hypothetical protein 221 114 Op 2 20/0.000 + CDS 231989 - 233659 1536 ## COG2060 K+-transporting ATPase, A chain 222 114 Op 3 18/0.000 + CDS 233662 - 235776 1832 ## COG2216 High-affinity K+ transport system, ATPase chain B 223 114 Op 4 15/0.000 + CDS 235789 - 236394 443 ## COG2156 K+-transporting ATPase, c chain 224 114 Op 5 16/0.000 + CDS 236459 - 238927 1961 ## COG2205 Osmosensitive K+ channel histidine kinase 225 114 Op 6 . + CDS 238924 - 239607 603 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 226 114 Op 7 . + CDS 239629 - 240135 281 ## PPA0120 hypothetical protein + Term 240206 - 240258 -0.9 + Prom 240564 - 240623 2.7 227 115 Tu 1 . + CDS 240763 - 241005 132 ## gi|313815552|gb|EFS53266.1| hypothetical protein HMPREF9589_01695 + Term 241007 - 241034 0.1 228 116 Tu 1 . - CDS 241092 - 241358 81 ## gi|313815554|gb|EFS53268.1| hypothetical protein HMPREF9589_01697 229 117 Tu 1 . + CDS 241533 - 241745 180 ## gi|327334689|gb|EGE76400.1| cytochrome c family protein - TRNA 242108 - 242180 87.8 # Ala TGC 0 0 - Term 242045 - 242091 10.7 230 118 Op 1 14/0.000 - CDS 242321 - 243694 848 ## COG0612 Predicted Zn-dependent peptidases 231 118 Op 2 . - CDS 243694 - 244965 720 ## COG0612 Predicted Zn-dependent peptidases 232 119 Op 1 . + CDS 245171 - 245590 275 ## HMPREF0675_3138 hypothetical protein 233 119 Op 2 3/0.045 + CDS 245583 - 247922 1761 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) 234 119 Op 3 . + CDS 247932 - 249479 759 ## COG5650 Predicted integral membrane protein 235 119 Op 4 . + CDS 249476 - 250651 730 ## HMPREF0675_3141 hypothetical protein 236 119 Op 5 . + CDS 250729 - 251985 440 ## HMPREF0675_3142 hypothetical protein 237 120 Op 1 . - CDS 251946 - 253208 741 ## COG0438 Glycosyltransferase 238 120 Op 2 . - CDS 253271 - 253516 86 ## 239 121 Op 1 . + CDS 253476 - 254603 1064 ## PPA0131 putative glycosyl transferase (EC:2.4.1.-) 240 121 Op 2 . + CDS 254600 - 255922 916 ## HMPREF0675_3145 O-antigen polymerase 241 122 Op 1 . - CDS 255896 - 256672 682 ## HMPREF0675_3146 hypothetical protein 242 122 Op 2 . - CDS 256674 - 256898 136 ## gi|315109979|gb|EFT81955.1| hypothetical protein HMPREF9602_01099 243 123 Op 1 9/0.000 + CDS 256846 - 257463 630 ## COG0110 Acetyltransferase (isoleucine patch superfamily) 244 123 Op 2 3/0.045 + CDS 257547 - 258659 1221 ## COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 245 123 Op 3 . + CDS 258659 - 259651 1031 ## COG0673 Predicted dehydrogenases and related proteins + Term 259663 - 259703 11.0 246 124 Tu 1 . + CDS 259753 - 261135 597 ## PPA0137 hypothetical protein 247 125 Tu 1 . - CDS 261106 - 261417 75 ## gi|313814073|gb|EFS51787.1| hypothetical protein HMPREF9587_00461 248 126 Tu 1 . + CDS 261340 - 262917 1637 ## COG3104 Dipeptide/tripeptide permease 249 127 Op 1 6/0.000 + CDS 263161 - 264345 982 ## COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases 250 127 Op 2 . + CDS 264361 - 265161 895 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 251 128 Op 1 . - CDS 265225 - 265482 284 ## HMPREF0675_3154 phosphocarrier, HPr family 252 128 Op 2 19/0.000 - CDS 265518 - 267530 1939 ## COG1299 Phosphotransferase system, fructose-specific IIC component 253 128 Op 3 . - CDS 267540 - 268514 391 ## COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) 254 128 Op 4 . - CDS 268487 - 268705 151 ## gi|314982717|gb|EFT26809.1| conserved domain protein 255 129 Tu 1 . - CDS 268819 - 269580 572 ## COG1349 Transcriptional regulators of sugar metabolism 256 130 Op 1 . + CDS 269745 - 271043 1363 ## COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase 257 130 Op 2 . + CDS 271027 - 272286 369 ## HMPREF0675_3160 O-antigen polymerase 258 131 Op 1 3/0.045 + CDS 272405 - 273520 455 ## COG0438 Glycosyltransferase + Term 273574 - 273606 -0.2 259 131 Op 2 3/0.045 + CDS 273618 - 274691 1089 ## COG0381 UDP-N-acetylglucosamine 2-epimerase 260 131 Op 3 . + CDS 274691 - 275812 730 ## COG0438 Glycosyltransferase + Term 275839 - 275872 -0.6 261 132 Tu 1 . + CDS 276035 - 276982 350 ## PPA0150 hypothetical protein - Term 277277 - 277320 8.2 262 133 Op 1 . - CDS 277326 - 277613 328 ## HMPREF0675_3165 hypothetical protein 263 133 Op 2 . - CDS 277619 - 279001 1331 ## COG1252 NADH dehydrogenase, FAD-containing subunit 264 134 Tu 1 . + CDS 279128 - 279775 409 ## PPA0154 MutT/NUDIX family protein 265 135 Tu 1 . + CDS 280048 - 282273 998 ## COG1643 HrpA-like helicases 266 136 Op 1 4/0.045 + CDS 282581 - 283210 779 ## COG4721 Predicted membrane protein 267 136 Op 2 . + CDS 283207 - 285306 1256 ## COG1122 ABC-type cobalt transport system, ATPase component + Term 285396 - 285433 -0.1 268 137 Op 1 . - CDS 285319 - 286536 1226 ## COG0438 Glycosyltransferase - Term 286545 - 286576 1.6 269 137 Op 2 . - CDS 286587 - 287006 354 ## HMPREF0675_3199 DoxX protein - Term 287514 - 287560 17.2 270 138 Op 1 1/0.121 - CDS 287573 - 288580 886 ## COG0167 Dihydroorotate dehydrogenase 271 138 Op 2 . - CDS 288604 - 292218 3520 ## COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit 272 138 Op 3 . - CDS 292234 - 294021 1489 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases - Prom 294192 - 294251 2.1 + Prom 294157 - 294216 2.9 273 139 Tu 1 . + CDS 294300 - 294617 240 ## COG0011 Uncharacterized conserved protein + Term 294821 - 294873 2.1 274 140 Tu 1 . - CDS 294639 - 295412 454 ## COG2186 Transcriptional regulators - Prom 295624 - 295683 4.3 + Prom 295610 - 295669 5.0 275 141 Op 1 4/0.045 + CDS 295795 - 297483 1794 ## COG1620 L-lactate permease 276 141 Op 2 17/0.000 + CDS 297538 - 298332 714 ## COG0247 Fe-S oxidoreductase 277 141 Op 3 13/0.000 + CDS 298336 - 299871 1234 ## COG1139 Uncharacterized conserved protein containing a ferredoxin-like domain 278 141 Op 4 . + CDS 299868 - 300548 660 ## COG1556 Uncharacterized conserved protein 279 142 Tu 1 . + CDS 300616 - 300936 179 ## HMPREF0675_3210 ABC transporter, ATP-binding protein + Term 300982 - 301026 -0.5 280 143 Op 1 . - CDS 300894 - 301091 216 ## gi|313764827|gb|EFS36191.1| conserved domain protein 281 143 Op 2 . - CDS 301111 - 302160 481 ## Arch_1539 hypothetical protein 282 143 Op 3 14/0.000 - CDS 302246 - 303850 1364 ## COG4987 ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components 283 143 Op 4 5/0.015 - CDS 303847 - 305160 174 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 - Term 305430 - 305474 11.4 284 144 Op 1 31/0.000 - CDS 305491 - 306564 1203 ## COG1294 Cytochrome bd-type quinol oxidase, subunit 2 285 144 Op 2 . - CDS 306577 - 308097 1585 ## COG1271 Cytochrome bd-type quinol oxidase, subunit 1 286 145 Tu 1 . - CDS 308297 - 309802 1238 ## COG0531 Amino acid transporters 287 146 Op 1 35/0.000 - CDS 309913 - 311913 206 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 288 146 Op 2 . - CDS 311910 - 313646 229 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P - Prom 313890 - 313949 2.2 + Prom 313829 - 313888 1.7 289 147 Tu 1 . + CDS 313918 - 315027 747 ## HMPREF0675_3220 DNA-binding protein 290 148 Tu 1 . - CDS 315234 - 315743 237 ## gi|313764814|gb|EFS36178.1| hypothetical protein HMPREF9567_00451 291 149 Tu 1 . + CDS 315876 - 317408 1645 ## COG1190 Lysyl-tRNA synthetase (class II) + Term 317630 - 317668 0.0 292 150 Tu 1 . - CDS 317447 - 317728 307 ## HMPREF0675_3223 hypothetical protein 293 151 Tu 1 . + CDS 317850 - 318680 578 ## COG3879 Uncharacterized protein conserved in bacteria 294 152 Op 1 4/0.045 - CDS 318771 - 320669 1545 ## COG0515 Serine/threonine protein kinase 295 152 Op 2 19/0.000 - CDS 320716 - 322143 892 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 296 152 Op 3 4/0.045 - CDS 322140 - 323531 1300 ## COG0772 Bacterial cell division membrane protein 297 152 Op 4 7/0.000 - CDS 323528 - 325015 891 ## COG0631 Serine/threonine protein phosphatase 298 152 Op 5 . - CDS 325019 - 325507 239 ## COG1716 FOG: FHA domain 299 152 Op 6 . - CDS 325510 - 326199 573 ## PPA0189 hypothetical protein 300 153 Op 1 . - CDS 326371 - 327414 646 ## HMPREF0675_3231 hypothetical protein 301 153 Op 2 . - CDS 327488 - 328450 604 ## HMPREF0675_3232 phosphotransferase enzyme family protein 302 154 Op 1 . - CDS 329044 - 329745 400 ## PPA0192 hypothetical protein 303 154 Op 2 . - CDS 329755 - 330666 621 ## HMPREF0675_3234 hypothetical protein 304 154 Op 3 . - CDS 330707 - 335470 2397 ## COG3209 Rhs family protein 305 155 Tu 1 . - CDS 335590 - 336381 504 ## HMPREF0675_3243 hypothetical protein - TRNA 336518 - 336602 50.2 # Ser GGA 0 0 - Term 336470 - 336511 5.0 306 156 Tu 1 . - CDS 336682 - 337047 312 ## COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) - Prom 337283 - 337342 2.3 + Prom 337246 - 337305 2.1 307 157 Op 1 . + CDS 337330 - 337686 352 ## PPA0203 hypothetical protein 308 157 Op 2 30/0.000 + CDS 337754 - 340627 1668 ## COG2812 DNA polymerase III, gamma/tau subunits 309 157 Op 3 23/0.000 + CDS 340737 - 341060 296 ## COG0718 Uncharacterized protein conserved in bacteria 310 157 Op 4 . + CDS 341091 - 341696 582 ## COG0353 Recombinational DNA repair protein (RecF pathway) 311 158 Op 1 1/0.121 + CDS 341804 - 342379 517 ## COG1695 Predicted transcriptional regulators 312 158 Op 2 36/0.000 + CDS 342385 - 343167 275 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 313 158 Op 3 . + CDS 343191 - 345806 1083 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 314 159 Tu 1 . - CDS 345810 - 347645 1092 ## COG2966 Uncharacterized conserved protein 315 160 Op 1 4/0.045 + CDS 347756 - 348556 626 ## COG0561 Predicted hydrolases of the HAD superfamily 316 160 Op 2 . + CDS 348566 - 349375 614 ## COG0561 Predicted hydrolases of the HAD superfamily + Prom 349743 - 349802 2.5 317 161 Tu 1 . + CDS 349978 - 350712 187 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 + Prom 350943 - 351002 2.8 318 162 Op 1 . + CDS 351048 - 351914 216 ## HMPREF0675_3259 hypothetical protein 319 162 Op 2 . + CDS 351908 - 352516 203 ## PPA0215 hypothetical protein - Term 352601 - 352640 0.0 320 163 Tu 1 . - CDS 352793 - 353020 70 ## gi|328759430|gb|EGF73046.1| hypothetical protein HMPREF9588_00054 321 164 Tu 1 . + CDS 353162 - 356485 3046 ## COG0060 Isoleucyl-tRNA synthetase - Term 356531 - 356566 0.8 322 165 Op 1 3/0.045 - CDS 356600 - 357937 728 ## COG3681 Uncharacterized conserved protein 323 165 Op 2 . - CDS 358001 - 359296 976 ## COG0814 Amino acid permeases - Prom 359325 - 359384 2.1 324 166 Tu 1 . + CDS 359332 - 359487 97 ## 325 167 Tu 1 . - CDS 359523 - 360548 977 ## COG0673 Predicted dehydrogenases and related proteins - Prom 360592 - 360651 3.0 326 168 Op 1 . + CDS 360571 - 360954 166 ## PPA0220 putative regulatory protein 327 168 Op 2 . + CDS 360951 - 361124 199 ## HMPREF0675_3267 hypothetical protein 328 168 Op 3 . + CDS 361121 - 361576 435 ## COG0251 Putative translation initiation inhibitor, yjgF family + Term 361600 - 361645 17.4 - Term 361585 - 361633 16.9 329 169 Tu 1 . - CDS 361659 - 362360 527 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases + Prom 362191 - 362250 1.6 330 170 Tu 1 . + CDS 362278 - 363204 390 ## COG0177 Predicted EndoIII-related endonuclease + Term 363220 - 363255 -0.5 + Prom 363349 - 363408 41.2 331 171 Tu 1 . + CDS 363551 - 364207 356 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes + Term 364208 - 364236 2.1 332 172 Op 1 . - CDS 364288 - 364824 628 ## HMPREF0675_3273 hypothetical protein 333 172 Op 2 . - CDS 364921 - 366183 905 ## COG3004 Na+/H+ antiporter - Prom 366265 - 366324 2.4 334 173 Tu 1 . - CDS 366351 - 367109 402 ## COG0500 SAM-dependent methyltransferases 335 174 Op 1 . + CDS 367460 - 368296 242 ## HMPREF0675_3275 CpaE-like protein 336 174 Op 2 8/0.000 + CDS 368374 - 369459 535 ## COG4962 Flp pilus assembly protein, ATPase CpaF 337 174 Op 3 . + CDS 369456 - 370226 431 ## COG4965 Flp pilus assembly protein TadB 338 174 Op 4 . + CDS 370223 - 370510 181 ## HMPREF0675_3279 type II secretion system F domain protein 339 174 Op 5 . + CDS 370529 - 370972 313 ## HMPREF0675_3279 type II secretion system F domain protein 340 175 Op 1 . + CDS 371181 - 371468 210 ## HMPREF0675_3280 hypothetical protein 341 175 Op 2 . + CDS 371558 - 371875 211 ## HMPREF0675_3281 hypothetical protein 342 176 Op 1 . + CDS 372049 - 372279 118 ## HMPREF0675_3282 TadE-like protein 343 176 Op 2 . + CDS 372374 - 372631 167 ## HMPREF0675_3283 hypothetical protein 344 177 Tu 1 . - CDS 372692 - 374713 953 ## COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster 345 178 Op 1 . + CDS 374980 - 376497 942 ## COG2890 Methylase of polypeptide chain release factors + Prom 376507 - 376566 1.7 346 178 Op 2 . + CDS 376590 - 376877 333 ## HMPREF0675_3286 hypothetical protein 347 179 Op 1 . + CDS 377100 - 379889 2707 ## COG0550 Topoisomerase IA 348 179 Op 2 . + CDS 379891 - 381378 796 ## HMPREF0675_3288 hypothetical protein 349 179 Op 3 22/0.000 + CDS 381371 - 382015 411 ## COG0125 Thymidylate kinase 350 179 Op 4 . + CDS 382071 - 383270 625 ## COG0470 ATPase involved in DNA replication + Term 383319 - 383343 -1.0 351 179 Op 5 . + CDS 383402 - 384208 688 ## HMPREF0675_3291 DoxX protein + Term 384251 - 384299 16.1 352 180 Op 1 . + CDS 384493 - 384945 159 ## COG1774 Uncharacterized homolog of PSP1 353 180 Op 2 . + CDS 384962 - 386644 803 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 354 180 Op 3 . + CDS 386733 - 387065 260 ## HMPREF0675_3294 hypothetical protein 355 181 Tu 1 . - CDS 387099 - 388748 1477 ## COG4805 Uncharacterized protein conserved in bacteria - Prom 388923 - 388982 78.5 + TRNA 388906 - 388981 90.5 # Thr CGT 0 0 + Prom 388907 - 388966 77.8 356 182 Op 1 . + CDS 389186 - 390535 984 ## COG1231 Monoamine oxidase 357 182 Op 2 . + CDS 390837 - 391880 386 ## PPA0251 hypothetical protein + Term 391918 - 391951 0.5 358 183 Tu 1 . - CDS 391898 - 392383 364 ## COG2062 Phosphohistidine phosphatase SixA 359 184 Tu 1 . + CDS 392431 - 393420 516 ## COG3458 Acetyl esterase (deacetylase) 360 185 Tu 1 . - CDS 393436 - 394449 671 ## HMPREF0675_3302 hypothetical protein - Term 394460 - 394507 5.5 361 186 Tu 1 . - CDS 394560 - 395114 511 ## COG0221 Inorganic pyrophosphatase 362 187 Op 1 2/0.076 + CDS 395241 - 396614 902 ## COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) 363 187 Op 2 10/0.000 + CDS 396614 - 397549 667 ## COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 364 187 Op 3 11/0.000 + CDS 397577 - 398131 577 ## COG0634 Hypoxanthine-guanine phosphoribosyltransferase 365 187 Op 4 4/0.045 + CDS 398273 - 400426 1295 ## PROTEIN SUPPORTED gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 + Term 400431 - 400477 10.1 366 188 Op 1 . + CDS 400491 - 401066 474 ## COG0302 GTP cyclohydrolase I 367 188 Op 2 . + CDS 401130 - 401432 194 ## PPA0262 hypothetical protein + Prom 401544 - 401603 3.1 368 189 Op 1 . + CDS 401674 - 402780 765 ## COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins 369 189 Op 2 . + CDS 402780 - 403418 346 ## HMPREF0675_3312 hypothetical protein 370 190 Op 1 . + CDS 403622 - 404146 340 ## HMPREF0675_3313 hypothetical protein 371 190 Op 2 . + CDS 404176 - 404628 210 ## PPA0267 hypothetical protein + Prom 404729 - 404788 2.2 372 191 Op 1 . + CDS 404818 - 405792 595 ## HMPREF0675_3315 hypothetical protein 373 191 Op 2 . + CDS 405773 - 406405 470 ## PPA0270 hypothetical protein 374 191 Op 3 15/0.000 + CDS 406461 - 407306 869 ## COG0294 Dihydropteroate synthase and related enzymes 375 191 Op 4 17/0.000 + CDS 407367 - 407729 156 ## PROTEIN SUPPORTED gi|148994682|ref|ZP_01823786.1| 50S ribosomal protein L13 376 191 Op 5 . + CDS 407726 - 408283 431 ## COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 377 191 Op 6 . + CDS 408280 - 408816 424 ## HMPREF0675_3320 hypothetical protein 378 191 Op 7 . + CDS 408899 - 409576 639 ## PPA0275 hypothetical protein + Term 409598 - 409640 12.2 379 192 Tu 1 . - CDS 409653 - 410813 460 ## COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7 - Prom 410914 - 410973 2.8 + Prom 410878 - 410937 2.7 380 193 Tu 1 . + CDS 410982 - 411299 298 ## HMPREF0675_3323 hypothetical protein + Term 411333 - 411385 15.7 381 194 Tu 1 . - CDS 411293 - 411481 73 ## gi|314977069|gb|EFT21164.1| conserved domain protein 382 195 Tu 1 . + CDS 411561 - 414095 2464 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 383 196 Op 1 . - CDS 414148 - 415155 531 ## HMPREF0675_3325 hypothetical protein 384 196 Op 2 6/0.000 - CDS 415152 - 416138 891 ## COG3817 Predicted membrane protein 385 196 Op 3 . - CDS 416135 - 416899 764 ## COG3819 Predicted membrane protein - Prom 416993 - 417052 1.8 386 197 Op 1 8/0.000 + CDS 417022 - 417792 728 ## COG1540 Uncharacterized proteins, homologs of lactam utilization protein B 387 197 Op 2 21/0.000 + CDS 417789 - 418409 290 ## COG2049 Allophanate hydrolase subunit 1 388 197 Op 3 . + CDS 418406 - 419275 273 ## COG1984 Allophanate hydrolase subunit 2 + Term 419357 - 419415 3.7 389 198 Op 1 . + CDS 419439 - 420926 1139 ## COG0477 Permeases of the major facilitator superfamily 390 198 Op 2 . + CDS 420994 - 421893 576 ## COG1090 Predicted nucleoside-diphosphate sugar epimerase 391 198 Op 3 . + CDS 421890 - 422798 524 ## COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) + Term 423038 - 423079 0.0 392 199 Op 1 . - CDS 422816 - 423370 197 ## COG0563 Adenylate kinase and related kinases 393 199 Op 2 19/0.000 - CDS 423444 - 424100 572 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 394 199 Op 3 . - CDS 424180 - 425412 794 ## COG4585 Signal transduction histidine kinase 395 200 Tu 1 . + CDS 425563 - 426159 550 ## PPA0291 hypothetical protein + Term 426190 - 426243 17.8 396 201 Op 1 7/0.000 - CDS 426365 - 427276 636 ## COG3711 Transcriptional antiterminator 397 201 Op 2 3/0.045 - CDS 427281 - 427754 207 ## COG2190 Phosphotransferase system IIA components 398 201 Op 3 3/0.045 - CDS 427766 - 429292 1509 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 399 201 Op 4 . - CDS 429294 - 429587 342 ## COG3010 Putative N-acetylmannosamine-6-phosphate epimerase 400 202 Tu 1 . + CDS 429586 - 429702 79 ## gi|332674703|gb|AEE71519.1| hypothetical protein PAZ_c03170 - Term 430270 - 430315 6.1 401 203 Op 1 . - CDS 430465 - 431340 457 ## COG1194 A/G-specific DNA glycosylase 402 203 Op 2 7/0.000 - CDS 431333 - 432643 1194 ## COG0001 Glutamate-1-semialdehyde aminotransferase 403 203 Op 3 . - CDS 432691 - 433737 950 ## COG0113 Delta-aminolevulinic acid dehydratase 404 203 Op 4 . - CDS 433767 - 434492 489 ## HMPREF0675_3346 uroporphyrinogen-III synthase (EC:4.2.1.75) 405 203 Op 5 . - CDS 434489 - 435493 485 ## COG0181 Porphobilinogen deaminase 406 203 Op 6 3/0.045 - CDS 435540 - 436970 710 ## COG1232 Protoporphyrinogen oxidase 407 203 Op 7 . - CDS 436985 - 437902 724 ## COG0407 Uroporphyrinogen-III decarboxylase - Prom 438108 - 438167 2.1 + Prom 438067 - 438126 2.0 408 204 Op 1 . + CDS 438161 - 439516 770 ## COG0373 Glutamyl-tRNA reductase 409 204 Op 2 . + CDS 439506 - 441557 1312 ## COG0276 Protoheme ferro-lyase (ferrochelatase) 410 204 Op 3 . + CDS 441557 - 442261 361 ## HMPREF0675_3352 hypothetical protein - Term 442090 - 442119 1.4 411 205 Op 1 7/0.000 - CDS 442297 - 443397 567 ## PROTEIN SUPPORTED gi|163764769|ref|ZP_02171823.1| ribosomal protein L18 412 205 Op 2 . - CDS 443450 - 444847 919 ## COG1066 Predicted ATP-dependent serine protease 413 205 Op 3 . - CDS 444913 - 446538 1253 ## COG0281 Malic enzyme 414 205 Op 4 . - CDS 446623 - 447261 458 ## PPA0314 hypothetical protein 415 206 Op 1 . + CDS 447413 - 448300 543 ## COG1082 Sugar phosphate isomerases/epimerases 416 206 Op 2 . + CDS 448363 - 449259 448 ## COG0506 Proline dehydrogenase 417 207 Op 1 . + CDS 449370 - 450095 569 ## COG1266 Predicted metal-dependent membrane protease 418 207 Op 2 . + CDS 450140 - 451183 696 ## COG0136 Aspartate-semialdehyde dehydrogenase 419 207 Op 3 . + CDS 451216 - 451971 589 ## COG0345 Pyrroline-5-carboxylate reductase 420 207 Op 4 . + CDS 452035 - 452208 114 ## + Term 452266 - 452318 16.1 421 208 Tu 1 . + CDS 452334 - 452567 164 ## PPA0321 hypothetical protein 422 209 Op 1 . + CDS 452691 - 454406 1214 ## COG1587 Uroporphyrinogen-III synthase 423 209 Op 2 4/0.045 + CDS 454477 - 455145 487 ## COG0406 Fructose-2,6-bisphosphatase 424 209 Op 3 13/0.000 + CDS 455142 - 455711 382 ## COG0526 Thiol-disulfide isomerase and thioredoxins 425 209 Op 4 4/0.045 + CDS 455759 - 456469 578 ## COG0785 Cytochrome c biogenesis protein 426 209 Op 5 8/0.000 + CDS 456547 - 458058 1132 ## COG1333 ResB protein required for cytochrome c biosynthesis 427 209 Op 6 . + CDS 458055 - 458948 768 ## COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component 428 209 Op 7 . + CDS 458950 - 460398 1095 ## PPA0329 putative sigma subunit 429 210 Tu 1 . - CDS 460410 - 461204 520 ## COG0300 Short-chain dehydrogenases of various substrate specificities 430 211 Tu 1 . - CDS 461421 - 462302 229 ## PPA0331 hypothetical protein - Prom 462390 - 462449 3.2 431 212 Tu 1 . - CDS 462704 - 463408 440 ## HMPREF0675_3373 hypothetical protein 432 213 Tu 1 . + CDS 463532 - 464932 415 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 433 214 Op 1 14/0.000 - CDS 465015 - 466031 1002 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 434 214 Op 2 35/0.000 - CDS 466043 - 466801 231 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 435 214 Op 3 . - CDS 466798 - 467832 799 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 436 215 Tu 1 . + CDS 467714 - 468019 124 ## 437 216 Tu 1 . - CDS 468061 - 468948 680 ## COG2375 Siderophore-interacting protein 438 217 Op 1 41/0.000 - CDS 469175 - 469951 201 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 439 217 Op 2 38/0.000 - CDS 469970 - 470896 954 ## COG0581 ABC-type phosphate transport system, permease component 440 217 Op 3 39/0.000 - CDS 470893 - 471897 797 ## COG0573 ABC-type phosphate transport system, permease component 441 217 Op 4 . - CDS 472006 - 473157 1125 ## COG0226 ABC-type phosphate transport system, periplasmic component 442 218 Op 1 3/0.045 - CDS 473330 - 474271 625 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 443 218 Op 2 . - CDS 474279 - 476384 1654 ## COG0855 Polyphosphate kinase 444 219 Tu 1 . - CDS 476506 - 477150 593 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 445 220 Tu 1 . + CDS 477155 - 478162 404 ## HMPREF0675_3387 hypothetical protein 446 221 Tu 1 . - CDS 478177 - 478614 402 ## COG1490 D-Tyr-tRNAtyr deacylase 447 222 Op 1 . + CDS 478810 - 479310 478 ## HMPREF0675_3389 hypothetical protein 448 222 Op 2 . + CDS 479312 - 480253 631 ## COG0354 Predicted aminomethyltransferase related to GcvT 449 222 Op 3 . + CDS 480294 - 481679 1100 ## COG2148 Sugar transferases involved in lipopolysaccharide synthesis + Term 481682 - 481731 1.9 450 223 Tu 1 . - CDS 481702 - 482439 671 ## COG4221 Short-chain alcohol dehydrogenase of unknown specificity - Term 482463 - 482491 1.3 451 224 Op 1 25/0.000 - CDS 482515 - 484188 1295 ## COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) 452 224 Op 2 . - CDS 484193 - 484459 268 ## COG1925 Phosphotransferase system, HPr-related proteins + Prom 484266 - 484325 1.5 453 225 Op 1 19/0.000 + CDS 484555 - 485358 223 ## PROTEIN SUPPORTED gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 454 225 Op 2 . + CDS 485415 - 485861 270 ## COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 455 226 Tu 1 . - CDS 485808 - 486212 387 ## COG3731 Phosphotransferase system sorbitol-specific component IIA + Prom 486238 - 486297 4.3 456 227 Tu 1 . + CDS 486450 - 486692 168 ## HMPREF0675_3397 PTS system, lactose/cellobiose specific IIB subunit + Term 486725 - 486768 10.5 - Term 486702 - 486763 11.3 457 228 Tu 1 . - CDS 486776 - 487261 589 ## COG1329 Transcriptional regulators, similar to M. xanthus CarD - Prom 487282 - 487341 6.1 + Prom 487266 - 487325 2.9 458 229 Tu 1 . + CDS 487506 - 488006 493 ## HMPREF0675_3399 hypothetical protein + Term 488143 - 488177 2.2 459 230 Op 1 40/0.000 - CDS 488059 - 488739 569 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 460 230 Op 2 . - CDS 488736 - 489902 670 ## COG0642 Signal transduction histidine kinase 461 231 Tu 1 . + CDS 490078 - 490746 677 ## COG0704 Phosphate uptake regulator + Term 490755 - 490801 13.1 + Prom 490782 - 490841 3.7 462 232 Tu 1 . + CDS 490892 - 491962 857 ## COG0726 Predicted xylanase/chitin deacetylase - Term 491877 - 491914 -1.0 463 233 Tu 1 . - CDS 492054 - 492803 826 ## COG0588 Phosphoglycerate mutase 1 464 234 Op 1 13/0.000 - CDS 492928 - 493386 406 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 465 234 Op 2 . - CDS 493631 - 493924 330 ## COG3414 Phosphotransferase system, galactitol-specific IIB component 466 235 Op 1 1/0.121 - CDS 494131 - 495123 838 ## COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D 467 235 Op 2 . - CDS 495127 - 496575 1203 ## COG1113 Gamma-aminobutyrate permease and related permeases 468 235 Op 3 . - CDS 496620 - 496841 115 ## 469 236 Tu 1 . - CDS 496951 - 498426 1568 ## COG0112 Glycine/serine hydroxymethyltransferase - Term 498491 - 498525 6.7 470 237 Op 1 8/0.000 - CDS 498540 - 499646 915 ## COG0524 Sugar kinases, ribokinase family 471 237 Op 2 . - CDS 499643 - 500290 489 ## COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase - Prom 500520 - 500579 1.8 472 238 Op 1 . + CDS 500703 - 500840 89 ## gi|313765535|gb|EFS36899.1| hypothetical protein HMPREF9567_00251 473 238 Op 2 . + CDS 500850 - 500999 82 ## gi|313765534|gb|EFS36898.1| hypothetical protein HMPREF9567_00250 474 238 Op 3 . + CDS 501058 - 501216 58 ## gi|313772917|gb|EFS38883.1| hypothetical protein HMPREF9574_00913 475 239 Op 1 . + CDS 501319 - 501507 151 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases 476 239 Op 2 . + CDS 501494 - 501655 58 ## PPA0379 putative dehydrogenase + Term 501848 - 501887 2.1 477 240 Op 1 . - CDS 501735 - 504215 1116 ## HMPREF0675_3415 hyaluronate lyase 478 240 Op 2 . - CDS 504272 - 504469 96 ## gi|313793056|gb|EFS41123.1| hypothetical protein HMPREF9575_01151 479 241 Tu 1 . + CDS 504594 - 504866 91 ## PPA0381 hypothetical protein 480 242 Op 1 . + CDS 504973 - 505197 92 ## PPA0381 hypothetical protein 481 242 Op 2 . + CDS 505248 - 506147 390 ## HMPREF0675_3416 hypothetical protein + Term 506391 - 506430 0.3 - Term 506504 - 506548 0.1 482 243 Op 1 7/0.000 - CDS 506663 - 507619 691 ## COG0566 rRNA methylases 483 243 Op 2 . - CDS 507633 - 509105 1011 ## COG0215 Cysteinyl-tRNA synthetase 484 244 Tu 1 . + CDS 509112 - 509330 180 ## PPA0385 hypothetical protein + Term 509415 - 509457 5.5 485 245 Tu 1 . - CDS 509341 - 510759 858 ## HMPREF0675_3421 hypothetical protein 486 246 Op 1 . + CDS 510749 - 510961 88 ## 487 246 Op 2 . + CDS 511011 - 511529 523 ## COG1302 Uncharacterized protein conserved in bacteria 488 246 Op 3 . + CDS 511541 - 511726 292 ## HMPREF0675_3423 hypothetical protein 489 246 Op 4 . + CDS 511726 - 512139 244 ## HMPREF0675_3424 hypothetical protein 490 246 Op 5 . + CDS 512141 - 512695 269 ## HMPREF0675_3425 hypothetical protein 491 246 Op 6 . + CDS 512692 - 513408 444 ## HMPREF0675_3426 hypothetical protein 492 246 Op 7 . + CDS 513465 - 514040 196 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 493 246 Op 8 . + CDS 514031 - 514555 236 ## PPA0393 hypothetical protein 494 246 Op 9 . + CDS 514548 - 514901 283 ## HMPREF0675_3429 hypothetical protein - Term 514905 - 514955 15.0 495 247 Tu 1 . - CDS 514967 - 516067 1101 ## COG3839 ABC-type sugar transport systems, ATPase components 496 248 Tu 1 . + CDS 516179 - 516406 121 ## gi|313824245|gb|EFS61959.1| conserved domain protein 497 249 Tu 1 . - CDS 516820 - 518256 981 ## COG1760 L-serine deaminase - Prom 518469 - 518528 1.9 + Prom 518473 - 518532 2.9 498 250 Op 1 2/0.076 + CDS 518598 - 520907 1210 ## COG0673 Predicted dehydrogenases and related proteins 499 250 Op 2 35/0.000 + CDS 520930 - 522222 1242 ## COG1653 ABC-type sugar transport system, periplasmic component 500 250 Op 3 38/0.000 + CDS 522219 - 523175 831 ## COG1175 ABC-type sugar transport systems, permease components 501 250 Op 4 5/0.015 + CDS 523168 - 524058 608 ## COG0395 ABC-type sugar transport system, permease component 502 251 Op 1 9/0.000 + CDS 524412 - 525449 921 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 503 251 Op 2 . + CDS 525475 - 526671 1200 ## COG0156 7-keto-8-aminopelargonate synthetase and related enzymes + Term 526678 - 526714 4.2 504 252 Op 1 13/0.000 - CDS 526688 - 527596 589 ## COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) 505 252 Op 2 3/0.045 - CDS 527633 - 528328 586 ## COG1174 ABC-type proline/glycine betaine transport systems, permease component 506 252 Op 3 24/0.000 - CDS 528325 - 528891 423 ## COG1174 ABC-type proline/glycine betaine transport systems, permease component 507 252 Op 4 . - CDS 528969 - 529805 360 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 508 253 Op 1 . + CDS 529967 - 530755 782 ## PPA0408 hypothetical protein 509 253 Op 2 . + CDS 530780 - 531142 379 ## COG3189 Uncharacterized conserved protein 510 254 Tu 1 . - CDS 531173 - 531688 476 ## COG2110 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 511 255 Tu 1 . + CDS 531806 - 532822 844 ## COG2130 Putative NADP-dependent oxidoreductases 512 256 Op 1 45/0.000 + CDS 532954 - 533901 638 ## COG1131 ABC-type multidrug transport system, ATPase component 513 256 Op 2 6/0.000 + CDS 533898 - 534647 647 ## COG0842 ABC-type multidrug transport system, permease component 514 256 Op 3 19/0.000 + CDS 534741 - 535877 833 ## COG4585 Signal transduction histidine kinase 515 256 Op 4 . + CDS 535882 - 536502 524 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 516 257 Tu 1 . - CDS 536775 - 537272 272 ## COG0406 Fructose-2,6-bisphosphatase 517 258 Op 1 2/0.076 + CDS 537399 - 538427 543 ## COG1270 Cobalamin biosynthesis protein CobD/CbiB 518 258 Op 2 . + CDS 538445 - 539899 967 ## COG1492 Cobyric acid synthase + Term 540042 - 540075 -0.9 519 259 Op 1 9/0.000 + CDS 540226 - 540981 723 ## COG2243 Precorrin-2 methylase 520 259 Op 2 2/0.076 + CDS 540978 - 541949 762 ## COG2875 Precorrin-4 methylase 521 259 Op 3 2/0.076 + CDS 541946 - 544510 2082 ## COG1010 Precorrin-3B methylase 522 259 Op 4 . + CDS 544513 - 545781 1032 ## COG2138 Uncharacterized conserved protein 523 259 Op 5 . + CDS 545823 - 546689 550 ## HMPREF0675_3457 hypothetical protein 524 259 Op 6 . + CDS 546734 - 546946 76 ## 525 260 Op 1 35/0.000 + CDS 547607 - 548671 730 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 526 260 Op 2 14/0.000 + CDS 548668 - 549459 209 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 527 260 Op 3 . + CDS 549461 - 550531 900 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component + Term 550657 - 550685 -1.0 528 261 Op 1 . - CDS 550621 - 551847 490 ## COG1373 Predicted ATPase (AAA+ superfamily) 529 261 Op 2 . - CDS 551940 - 552593 581 ## COG2082 Precorrin isomerase - Prom 552635 - 552694 2.8 530 262 Op 1 4/0.045 + CDS 552899 - 553582 842 ## COG0310 ABC-type Co2+ transport system, permease component 531 262 Op 2 8/0.000 + CDS 553575 - 554009 505 ## COG1930 ABC-type cobalt transport system, periplasmic component 532 262 Op 3 34/0.000 + CDS 554006 - 554851 579 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 533 262 Op 4 . + CDS 554848 - 555684 636 ## COG1122 ABC-type cobalt transport system, ATPase component 534 262 Op 5 . + CDS 555746 - 556426 518 ## HMPREF0675_3469 hypothetical protein + Term 556513 - 556544 1.5 535 263 Tu 1 . - CDS 556453 - 557049 532 ## COG2242 Precorrin-6B methylase 2 536 264 Op 1 5/0.015 + CDS 557277 - 557891 424 ## COG2109 ATP:corrinoid adenosyltransferase 537 264 Op 2 4/0.045 + CDS 557891 - 560314 1440 ## COG1797 Cobyrinic acid a,c-diamide synthase 538 264 Op 3 . + CDS 560324 - 561100 750 ## COG0007 Uroporphyrinogen-III methylase - Term 561007 - 561060 3.1 539 265 Tu 1 . - CDS 561120 - 562097 432 ## COG2099 Precorrin-6x reductase 540 266 Op 1 11/0.000 + CDS 562099 - 563766 1189 ## COG2038 NaMN:DMB phosphoribosyltransferase 541 266 Op 2 . + CDS 563763 - 564602 410 ## COG0368 Cobalamin-5-phosphate synthase 542 266 Op 3 . + CDS 564599 - 565363 357 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component + Term 565589 - 565622 -0.4 + TRNA 565420 - 565495 88.6 # Thr TGT 0 0 543 267 Tu 1 . - CDS 565585 - 567222 1116 ## HMPREF0675_3479 hypothetical protein 544 268 Op 1 . + CDS 567425 - 567631 111 ## gi|313765457|gb|EFS36821.1| hypothetical protein HMPREF9567_00172 545 268 Op 2 . + CDS 567653 - 567841 58 ## PPA0445 hypothetical protein 546 269 Op 1 2/0.076 - CDS 567879 - 569468 1199 ## COG3037 Uncharacterized protein conserved in bacteria 547 269 Op 2 . - CDS 569518 - 570282 369 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 548 269 Op 3 . - CDS 570350 - 570505 162 ## PPA0450 S-ribosylhomocysteinase (EC:3.13.1.-) 549 269 Op 4 6/0.000 - CDS 570582 - 570758 91 ## COG3335 Transposase and inactivated derivatives 550 269 Op 5 . - CDS 570725 - 570961 100 ## COG3335 Transposase and inactivated derivatives 551 270 Tu 1 . - CDS 571094 - 571456 91 ## gi|313772999|gb|EFS38965.1| conserved domain protein + Prom 571234 - 571293 3.9 552 271 Tu 1 . + CDS 571341 - 571727 142 ## PPA0448 hypothetical protein 553 272 Tu 1 . - CDS 571626 - 571823 63 ## gi|327447085|gb|EGE93739.1| conserved domain protein - Prom 571877 - 571936 1.8 + Prom 571769 - 571828 2.5 554 273 Tu 1 . + CDS 571848 - 572294 371 ## PPA0449 hypothetical protein + Term 572329 - 572361 3.3 - Term 572262 - 572306 -0.1 555 274 Op 1 . - CDS 572445 - 573098 485 ## COG1854 LuxS protein involved in autoinducer AI2 synthesis 556 274 Op 2 . - CDS 572965 - 574146 676 ## COG1482 Phosphomannose isomerase 557 274 Op 3 . - CDS 574190 - 574474 122 ## HMPREF0675_3490 hypothetical protein 558 274 Op 4 . - CDS 574398 - 574607 70 ## 559 275 Tu 1 . + CDS 574808 - 576442 1589 ## PROTEIN SUPPORTED gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 + Term 576465 - 576513 16.0 560 276 Tu 1 . - CDS 576577 - 577653 1050 ## COG0176 Transaldolase 561 277 Op 1 . - CDS 577755 - 578498 390 ## COG2188 Transcriptional regulators 562 277 Op 2 . - CDS 578473 - 578691 91 ## gi|315093919|gb|EFT65895.1| hypothetical protein HMPREF9582_00225 + Prom 578623 - 578682 3.8 563 278 Op 1 . + CDS 578713 - 579702 502 ## COG0524 Sugar kinases, ribokinase family 564 278 Op 2 . + CDS 579699 - 580586 487 ## PPA0457 hypothetical protein 565 278 Op 3 1/0.121 + CDS 580583 - 581455 464 ## COG3718 Uncharacterized enzyme involved in inositol metabolism 566 278 Op 4 . + CDS 581458 - 583356 1079 ## COG3962 Acetolactate synthase - Term 583295 - 583330 -0.1 567 279 Tu 1 . - CDS 583501 - 583737 306 ## PPA0460 hypothetical protein - Prom 583847 - 583906 2.0 568 280 Op 1 . + CDS 583736 - 584041 74 ## gi|315092658|gb|EFT64634.1| hypothetical protein HMPREF9578_01511 569 280 Op 2 . + CDS 584104 - 585597 1340 ## COG1012 NAD-dependent aldehyde dehydrogenases 570 280 Op 3 . + CDS 585693 - 586673 460 ## COG1609 Transcriptional regulators + Term 586680 - 586717 1.5 571 281 Tu 1 . - CDS 586822 - 587142 94 ## 572 282 Op 1 16/0.000 + CDS 587351 - 588013 492 ## COG0673 Predicted dehydrogenases and related proteins 573 282 Op 2 2/0.076 + CDS 588058 - 589056 630 ## COG1082 Sugar phosphate isomerases/epimerases 574 282 Op 3 16/0.000 + CDS 589128 - 589994 656 ## COG1082 Sugar phosphate isomerases/epimerases 575 282 Op 4 5/0.015 + CDS 590204 - 591415 672 ## COG0673 Predicted dehydrogenases and related proteins 576 283 Tu 1 . + CDS 591564 - 593171 1623 ## COG0477 Permeases of the major facilitator superfamily 577 284 Tu 1 . - CDS 593780 - 594643 727 ## COG1082 Sugar phosphate isomerases/epimerases - Prom 594694 - 594753 2.2 578 285 Op 1 . + CDS 594621 - 594806 145 ## 579 285 Op 2 . + CDS 594841 - 595827 932 ## COG0673 Predicted dehydrogenases and related proteins 580 286 Op 1 . + CDS 596033 - 596842 546 ## COG1266 Predicted metal-dependent membrane protease 581 286 Op 2 . + CDS 596829 - 597515 361 ## COG3142 Uncharacterized protein involved in copper resistance 582 287 Op 1 . - CDS 597529 - 598533 721 ## PPA0472 hypothetical protein 583 287 Op 2 . - CDS 598577 - 600235 1211 ## COG1061 DNA or RNA helicases of superfamily II 584 288 Op 1 . - CDS 600867 - 602996 1040 ## HMPREF0675_3517 hypothetical protein 585 288 Op 2 . - CDS 602993 - 603367 344 ## PPA0475 hypothetical protein 586 289 Tu 1 . + CDS 603922 - 604707 676 ## COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase 587 290 Op 1 . + CDS 604854 - 605237 362 ## COG1278 Cold shock proteins 588 290 Op 2 . + CDS 605237 - 606037 508 ## PPA0478 hypothetical protein 589 291 Tu 1 . - CDS 606075 - 606347 308 ## HMPREF0675_3522 hypothetical protein + Prom 606304 - 606363 3.0 590 292 Tu 1 . + CDS 606471 - 607874 1340 ## COG2252 Permeases 591 293 Tu 1 . - CDS 607849 - 608559 300 ## HMPREF0675_3524 hypothetical protein + Prom 608523 - 608582 1.6 592 294 Tu 1 . + CDS 608702 - 609706 576 ## PPA0482 hypothetical protein 593 295 Tu 1 . - CDS 609703 - 610707 693 ## COG1932 Phosphoserine aminotransferase 594 296 Tu 1 . + CDS 610914 - 612044 760 ## COG1820 N-acetylglucosamine-6-phosphate deacetylase + Term 612093 - 612131 -0.9 595 297 Op 1 . + CDS 612198 - 612896 477 ## COG1321 Mn-dependent transcriptional regulator 596 297 Op 2 . + CDS 612917 - 613996 568 ## HMPREF0675_3529 hypothetical protein + Term 614015 - 614054 0.7 597 297 Op 3 . + CDS 614118 - 614483 368 ## COG0526 Thiol-disulfide isomerase and thioredoxins + Term 614520 - 614574 12.3 598 298 Tu 1 . - CDS 614379 - 614570 97 ## 599 299 Tu 1 . + CDS 614655 - 616271 1245 ## COG0477 Permeases of the major facilitator superfamily 600 300 Tu 1 . - CDS 616268 - 616474 91 ## - TRNA 616351 - 616423 73.8 # Arg CCT 0 0 601 301 Tu 1 . - CDS 616578 - 616832 122 ## gi|313831952|gb|EFS69666.1| conserved domain protein + Prom 616680 - 616739 3.0 602 302 Op 1 . + CDS 616765 - 618162 1338 ## COG4284 UDP-glucose pyrophosphorylase 603 302 Op 2 . + CDS 618189 - 618530 99 ## HMPREF0675_3535 hypothetical protein + Term 618606 - 618639 -0.8 604 303 Tu 1 . - CDS 618553 - 618921 487 ## COG1970 Large-conductance mechanosensitive channel 605 304 Tu 1 . - CDS 619022 - 619597 277 ## PPA0492 hypothetical protein 606 305 Op 1 3/0.045 - CDS 619758 - 620060 161 ## COG2331 Uncharacterized protein conserved in bacteria 607 305 Op 2 . - CDS 620138 - 620647 367 ## COG0212 5-formyltetrahydrofolate cyclo-ligase 608 306 Op 1 3/0.045 + CDS 620835 - 622142 501 ## COG0303 Molybdopterin biosynthesis enzyme 609 306 Op 2 . + CDS 622204 - 622854 420 ## PROTEIN SUPPORTED gi|229849629|ref|ZP_04469689.1| acetyltransferase, ribosomal protein N-acetylase 610 306 Op 3 . + CDS 622927 - 623730 450 ## PPA0496 hypothetical protein + Term 623964 - 624030 30.0 + TRNA 623946 - 624018 82.0 # Ala CGC 0 0 611 307 Tu 1 . - CDS 624007 - 624210 124 ## 612 308 Op 1 . - CDS 624469 - 625146 418 ## COG3381 Uncharacterized component of anaerobic dehydrogenases 613 308 Op 2 5/0.015 - CDS 625143 - 625628 404 ## COG0315 Molybdenum cofactor biosynthesis enzyme 614 308 Op 3 1/0.121 - CDS 625594 - 626736 598 ## COG0303 Molybdopterin biosynthesis enzyme 615 309 Op 1 . - CDS 626925 - 627347 229 ## COG0314 Molybdopterin converting factor, large subunit 616 309 Op 2 . - CDS 627348 - 627587 253 ## HMPREF0675_3548 ThiS family protein 617 309 Op 3 . - CDS 627590 - 628630 505 ## COG2896 Molybdenum cofactor biosynthesis enzyme - Prom 628855 - 628914 3.1 618 310 Tu 1 . + CDS 628535 - 628732 79 ## HMPREF0675_3549 hypothetical protein 619 311 Op 1 . + CDS 628873 - 629301 336 ## PPA0503 putative molybdopterin-binding protein 620 311 Op 2 . + CDS 629307 - 630077 485 ## COG0725 ABC-type molybdate transport system, periplasmic component 621 312 Tu 1 . - CDS 629957 - 630196 87 ## 622 313 Tu 1 . + CDS 630237 - 632015 284 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 623 314 Op 1 . - CDS 631949 - 632668 175 ## PPA0506 putative regulator 624 314 Op 2 12/0.000 - CDS 632670 - 633383 316 ## COG2181 Nitrate reductase gamma subunit 625 314 Op 3 12/0.000 - CDS 633380 - 634051 372 ## COG2180 Nitrate reductase delta subunit 626 314 Op 4 13/0.000 - CDS 634053 - 635576 804 ## COG1140 Nitrate reductase beta subunit 627 314 Op 5 10/0.000 - CDS 635576 - 639313 2340 ## COG5013 Nitrate reductase alpha subunit 628 314 Op 6 . - CDS 639371 - 640741 971 ## COG2223 Nitrate/nitrite transporter 629 315 Tu 1 . + CDS 640664 - 641548 300 ## HMPREF0675_3558 hypothetical protein + Term 641702 - 641739 0.8 630 316 Tu 1 . + CDS 641844 - 642344 199 ## PROTEIN SUPPORTED gi|134277849|ref|ZP_01764564.1| ribosomal protein S16 + Term 642411 - 642449 2.1 631 317 Tu 1 . + CDS 642514 - 642789 220 ## PPA0514 putative molybdopterin-guanine dinucleotide biosynthesis protein 632 318 Op 1 9/0.000 - CDS 642853 - 643863 760 ## COG3302 DMSO reductase anchor subunit 633 318 Op 2 16/0.000 - CDS 643863 - 644504 415 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 - Prom 644555 - 644614 2.1 634 318 Op 3 5/0.015 - CDS 644671 - 646668 1339 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 635 318 Op 4 . - CDS 646705 - 647262 311 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing - Prom 647313 - 647372 2.2 - Term 647596 - 647630 3.1 636 319 Op 1 5/0.015 - CDS 647686 - 648513 571 ## COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 637 319 Op 2 . - CDS 648528 - 649361 527 ## COG2022 Uncharacterized enzyme of thiazole biosynthesis 638 319 Op 3 . - CDS 649403 - 649669 89 ## HMPREF0675_3568 thiamine biosynthesis protein ThiS 639 319 Op 4 . - CDS 649679 - 650926 719 ## COG0665 Glycine/D-amino acid oxidases (deaminating) - Term 651179 - 651213 2.7 640 320 Tu 1 . - CDS 651308 - 651622 338 ## HMPREF0675_3571 hypothetical protein 641 321 Op 1 . - CDS 651882 - 653327 542 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 642 321 Op 2 . - CDS 653410 - 654939 1021 ## COG1928 Dolichyl-phosphate-mannose--protein O-mannosyl transferase 643 322 Op 1 . + CDS 654796 - 655914 781 ## COG0313 Predicted methyltransferases 644 322 Op 2 1/0.121 + CDS 655911 - 656819 559 ## COG0084 Mg-dependent DNase 645 322 Op 3 6/0.000 + CDS 656816 - 657712 634 ## COG0030 Dimethyladenosine transferase (rRNA methylation) 646 322 Op 4 . + CDS 657745 - 658707 438 ## COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase 647 322 Op 5 . + CDS 658704 - 659243 365 ## COG1846 Transcriptional regulators 648 323 Tu 1 . - CDS 659225 - 659857 456 ## COG1309 Transcriptional regulator - Prom 660009 - 660068 80.4 649 324 Tu 1 . + CDS 659790 - 659999 84 ## + TRNA 659991 - 660069 39.0 # Gln TTG 0 0 + Prom 660001 - 660060 73.7 650 325 Op 1 11/0.000 + CDS 660158 - 661456 1125 ## COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) 651 325 Op 2 . + CDS 661489 - 662421 967 ## COG0462 Phosphoribosylpyrophosphate synthetase 652 326 Op 1 . + CDS 662570 - 663847 810 ## HMPREF0675_3583 hypothetical protein 653 326 Op 2 . + CDS 663883 - 664452 476 ## HMPREF0675_3584 hypothetical protein 654 326 Op 3 . + CDS 664472 - 665068 433 ## PPA0534 hypothetical protein 655 327 Op 1 22/0.000 + CDS 665247 - 665864 1031 ## PROTEIN SUPPORTED gi|213960306|ref|ZP_03388588.1| ribosomal protein L25, Ctc-form 656 327 Op 2 . + CDS 665861 - 666463 269 ## COG0193 Peptidyl-tRNA hydrolase - Term 666218 - 666271 5.2 657 328 Tu 1 . - CDS 666503 - 666745 259 ## COG1052 Lactate dehydrogenase and related dehydrogenases 658 329 Tu 1 . + CDS 666662 - 666970 81 ## HMPREF0675_3589 hypothetical protein - Term 667106 - 667152 -0.6 659 330 Op 1 . - CDS 667282 - 667488 61 ## 660 330 Op 2 . - CDS 667500 - 668555 895 ## COG1064 Zn-dependent alcohol dehydrogenases 661 331 Tu 1 . - CDS 668930 - 670069 763 ## HMPREF0675_3592 hypothetical protein 662 332 Op 1 . + CDS 670133 - 673759 2509 ## COG1197 Transcription-repair coupling factor (superfamily II helicase) 663 332 Op 2 . + CDS 673827 - 674336 388 ## HMPREF0675_3594 hypothetical protein 664 332 Op 3 . + CDS 674345 - 674983 573 ## COG1694 Predicted pyrophosphatase 665 333 Op 1 . + CDS 675099 - 675629 369 ## HMPREF0675_3596 hypothetical protein 666 333 Op 2 . + CDS 675717 - 676997 1627 ## COG0148 Enolase 667 334 Op 1 . + CDS 677297 - 677737 330 ## HMPREF0675_3598 septum formation initiator 668 334 Op 2 4/0.045 + CDS 677745 - 678287 402 ## COG1507 Uncharacterized conserved protein 669 334 Op 3 . + CDS 678284 - 679216 619 ## COG0248 Exopolyphosphatase + Term 679370 - 679415 1.2 + TRNA 679227 - 679300 52.4 # Leu TAA 0 0 + Prom 679227 - 679286 76.8 670 335 Tu 1 . + CDS 679448 - 680281 695 ## COG4760 Predicted membrane protein + Term 680295 - 680335 12.9 671 336 Op 1 . - CDS 680353 - 681048 414 ## HMPREF0675_3603 hydrolase, NUDIX family 672 336 Op 2 . - CDS 681125 - 682090 542 ## PPA0551 hypothetical protein Predicted protein(s) >gi|302034478|gb|GL383157.1| GENE 1 3 - 819 443 272 aa, chain - ## HITS:1 COG:Rv2780 KEGG:ns NR:ns ## COG: Rv2780 COG0686 # Protein_GI_number: 15609917 # Func_class: E Amino acid transport and metabolism # Function: Alanine dehydrogenase # Organism: Mycobacterium tuberculosis H37Rv # 1 272 1 272 371 306 61.0 3e-83 MRVGVPTEVKNSEFRVAVTPAGVHALVGRGHEVLVQAGAGVGSGIPDSDFVGAGARVVGD VESVWGDADLVLKVKEPVAEEYGRLHEGLVLFTYLHLAADEALTRELLGRGVTSIAYETV ELADHSLPLLSPMSEIAGRLAAQVGANCLLQSAGGRGVLFGGGSGVRRGRVSVLGGGVAG LCAARVAAGMGADVTVFDVDVGRMRYIDEVWGGRIGTRFSSPLAVREACGESDVVIGSVL VPGARTPHLVDHEMVLGMVPGSVLVDVAVDQG >gi|302034478|gb|GL383157.1| GENE 2 993 - 2000 485 335 aa, chain - ## HITS:1 COG:PH1519 KEGG:ns NR:ns ## COG: PH1519 COG1522 # Protein_GI_number: 14591302 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Pyrococcus horikoshii # 3 132 6 138 151 62 26.0 1e-09 MYEELDRRLVNVLQIDPRASWAKVGKVLGVSPTTVAHRWQRLVDDGIAWITACPNLNQQM TAIVEVDCHTESLPQVIKTLCANPMIVSIDETTGDRDLLLTVVAPDLPTLSDMVIDWIGG LRGVHGSRSALVTSVVIGSNSWRIDALSKTEKILARGPRPGELWMLPPDDLDRELAQSLA VDGRTSATSLARTLDVPASTLHRRLQKLLTNRQIELRCDVAELGGWSLECTWTATIPLNH KTRVLELLRQQSGLRSCMWITGSNNLRVNFRVERQNGIGMIESAVAEAIPGLAPAETIVY MRSHKSMGWVLDRDGRTTGEFVCPPLIGAFERADH >gi|302034478|gb|GL383157.1| GENE 3 2294 - 3337 937 347 aa, chain + ## HITS:1 COG:AF0634 KEGG:ns NR:ns ## COG: AF0634 COG3804 # Protein_GI_number: 11498242 # Func_class: S Function unknown # Function: Uncharacterized conserved protein related to dihydrodipicolinate reductase # Organism: Archaeoglobus fulgidus # 10 332 4 300 308 129 31.0 8e-30 MTATNPIRVVQWGLGAMGQGMAKLITAKDGLELVGAIDVNPALDGKDIGEVLGIDPLGAN VTTDPASILDSNKVDVVTIATTSWVHDQIADLRTIITAGINVVSIAEEMSCPEAQNPDMA KELDELAKKHGVSAVGVGVNPGFVLDHLVVALSSGSQDVTHIEARRVNDLAPYGQTVLRT QGVGTTPEEFKAGVADGSIVGHVGFPESIRLISDALGLGVDSIEQHIEPIIAKVARPARD RTVEPGQVAGCNHTAVGRREGEEVIRLIHPQQVAPEAEGQETGDFITITGVPDISMSTGP EIAGGKATAGICVNTIPRIVAATPGLKRIIDLPSPCALMGPSAYERR >gi|302034478|gb|GL383157.1| GENE 4 3349 - 3696 195 115 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5354 NR:ns ## KEGG: HMPREF0675_5354 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 115 1 115 115 211 100.0 7e-54 MADISHTAPLADSPIPKGTWVEVRTIILQPSERAAAVPEDTAATPLVQWVSGFLDEEAHI GDEVTITSIIGRRHTGVLDCVNPSYSHSFGNTVPELLTIGTTHEPITFHGQEDQS >gi|302034478|gb|GL383157.1| GENE 5 3693 - 5114 1253 473 aa, chain + ## HITS:1 COG:MA1610 KEGG:ns NR:ns ## COG: MA1610 COG0498 # Protein_GI_number: 20090468 # Func_class: E Amino acid transport and metabolism # Function: Threonine synthase # Organism: Methanosarcina acetivorans str.C2A # 50 250 61 245 405 60 26.0 7e-09 MSNSYDDVMARRSDIMRRALALDYDSFQHGDLIFDYDALMSSTGYSLDDVARIQAETKVG DTPLYELHRLTEAVREIAGPGKGARILLKDEAANASGSFKARRASLSAHEAQAKGFAGMV TATSGNYGAGVASQAAQRALACIVIQEIYDSQHVGQPEIVEKSRACEAYGAEVIKLTVGP ELFYVLLRTLEDTGYFNASLYTPYGIAGIETLGAEIGREVQQRYGRQPDAVVVTHAGGGN ITGTTRGLRKMGCDQTQVIAVSVDLTGLHMASDHDFNNKSFTTGHTGFGVPFATWPDRVD VPRNAARPLRYMDGYQLVSQGEVFYMTELLTKIEGLERGPAGNTSLTAAVAMARQMDRDQ IVVVQETEYTGAGKHHNSQLSFARSRGIEVRRGDPAGNVPGKAIVIPERLDQVSVHPLDL DKLRHSYLRHASQIVAPEQWGDAELEFLAAETNTTTDDVRLIGTELATRTKGA >gi|302034478|gb|GL383157.1| GENE 6 5114 - 5536 373 140 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5356 NR:ns ## KEGG: HMPREF0675_5356 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 140 1 140 140 227 100.0 1e-58 MSNPDQERVERYEALRTELADLDDAALKERFWQLCEEVMTPVVDLARTHTTPSIERSVLL RMGIDSVTTHAVVENVFAAGLGGKGAGHAVLRLSRRDGIGLRDAATRIAEDPKALDELFD GSPLPPAKTPTTDSKEGASA >gi|302034478|gb|GL383157.1| GENE 7 5533 - 7494 1795 653 aa, chain + ## HITS:1 COG:no KEGG:PPA2280 NR:ns ## KEGG: PPA2280 # Name: not_defined # Def: D-ornithine aminomutase E component # Organism: P.acnes # Pathway: not_defined # 1 653 1 653 772 1353 100.0 0 MTIQDTCLHHKHTREREQLGPNNKSAVTPSEPVEPRTEQDLPGPNTKLNVEEILTDLEHY HPRRKGWTWRNVPEEGIDMGDFHYRNMSTPLKQSMPLPAAEYFENIDPQPAPVVTSEIAS GHFEDDLRRMRMAAWHGADHIMVIRTTGQSHIDGLLEGTPEGIGGVPITRKQLRASRKAC DLIEDEVGRPINFHSYVSGVAGPEVAVLFAEEGVNGAHQDPQYNLLYRNINAYRSYVDAG EAKKAMAGAQIFQIDGAHNANATARHGWKVMPELMVQHGLNCMYSVLVGMPKDLIGLSTV PPSAPPAPKLWYDLPYAVALRDLFSEYKMRAQQNTRYIESDLAEAIRTHTIDTLISMLTS ADIQSTITPDEGRNLPWHHNSVRGVQTVKQTWAALDGIKEMVTINREGPLGHMVRDLKER AIGFLTEMLHVGGYFVAVEDGFFVDSAEFPERNHDGIARDGQGGIAEGTVVERDPDYLAP VCDHFGNNNLPEGLNKPCDLIDGCTLCKPEKIVYIDELDPNDSAATRLACTRPFRDGTAL RPEAEWAGDGVVLVQMNIPGSEDIAREAAVEMARKMGITDPQVCNLQVLHPAEGCFVEVK GQATHVDVNPSKLTIPEKIELLPADELRQFVTDHELSVVAGTVGEDEHSVGLR >gi|302034478|gb|GL383157.1| GENE 8 7576 - 7851 344 91 aa, chain + ## HITS:1 COG:FN1862 KEGG:ns NR:ns ## COG: FN1862 COG5012 # Protein_GI_number: 19705167 # Func_class: R General function prediction only # Function: Predicted cobalamin binding protein # Organism: Fusobacterium nucleatum # 2 85 173 256 263 65 38.0 3e-11 MVDAAIESGADAILISTIISHNDIHRTMMRKLADLATEKGIRDKVVLVAGGTQVNREMAA ETGLDATFGRGTKGIDVLDAIVRTMRTHAEA >gi|302034478|gb|GL383157.1| GENE 9 7857 - 9287 1052 476 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5358 NR:ns ## KEGG: HMPREF0675_5358 # Name: not_defined # Def: putative reactivating factor for D-ornithine aminomutase (EC:5.4.99.1) # Organism: P.acnes_SK137 # Pathway: not_defined # 1 476 1 476 476 846 99.0 0 MTVLTTLEIGSTITKANAFRMESGLLHHIGQGFAPTSVAAGDVRIGADAAIAQMREQCAS PPAAGEIFVNSSAAGGLRMSVHGLTRSMTARAAREAALGAGAIVTMTTVGAMDEFDLEDL QENRPSIILLAGGVDDGEKRIVVENAKVIASAQLGVPVVYAGNSRVRRRVEHIFVDAGQP LTCVDNVFPDVDVLRVEPVRAVIHDVFNDHITAAPGMHGLVELTNHEILPTPRAVLLATE LFADAVGDAVVVDVGGATTDVHSVTDGSSEWSARVIDPEPRTKRTVEGDLGVFVNARRVA AMTDEGEDEECLEWLRAIPSDEREAEVTRWLAREAVEAGVGRHAGTVTEIFTPTGKTQVV RGKDLSAVRWVVGTGGALTRVPGGADILRRICTGAGAQLLPSPEATIVIDRDYRFSALGT VAQCYPDEVRRTFAAWIESLTGNTKLPSDEGVGVNDDAAPPDVTKNDTPHGLESTS >gi|302034478|gb|GL383157.1| GENE 10 9284 - 10372 807 362 aa, chain + ## HITS:1 COG:mlr5700_1 KEGG:ns NR:ns ## COG: mlr5700_1 COG3457 # Protein_GI_number: 13474743 # Func_class: E Amino acid transport and metabolism # Function: Predicted amino acid racemase # Organism: Mesorhizobium loti # 4 352 2 351 351 266 41.0 6e-71 MNRSTPRLEIFADRIRDNARAIVTQCAKHGVQVAAVTKVLHAHPVLLQALEDTGITMLAD SRLQNLRQIAECGTSLPTMLLRAPGRHDIDDTVQLADISLNSSLTTMTALSEAAVRAGTR HGVIVMVDVGDLREGVWPDHLVDVVSSAAALPGIDVKGVGTNLACYGGVQPSVENMTRLV QLRDMARAATGLELGLISGGNSANLPLMMSGAMPSEINNLRIGEAIILGRNTLDRSPWPQ TRQDTVEVVAEIIELERKPSIPLGRTGEDAFGQHVTFTDRGIRLRAICNLGRQDVNPSDL APVDPGNIVLGASSDHLIVDMTDSSESVEIGTEVRFWPTYAGLLATATSSAVWKAAATPH RL >gi|302034478|gb|GL383157.1| GENE 11 10411 - 11886 1170 491 aa, chain + ## HITS:1 COG:ECs5186 KEGG:ns NR:ns ## COG: ECs5186 COG1113 # Protein_GI_number: 15834440 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Escherichia coli O157:H7 # 29 474 10 454 470 514 58.0 1e-145 MSARETQSVDTPRRSALARPVKKPPATLDLESPTEERELQRGLTNRHLQLIALGGAIGTG MFMGSSSTIHLAGPSSALVYALIGFFLYFMMRALGEMLLSNLNYKSFRDIAEDLLGPAGG FIAGWTYWFSWIVAAMGDMAAITAYFQYWWPNIPKWLPATALAAVLLALNIIAVQFFGEA EFWFALIKLIAVGALVIVAIALLASRFVSPDGDPATIANLWNDGGFFPNGLMGFLGGFQI AFFAFVGIELVGTAAAETKDPCTTLPKAINAIPVRLALFYVFALLAITAVIPWRKVVPGV SPFVSLFGLAGFGAAASVMNFVLLTAAASSDNSGLYSTSRMMYGLALDGQAPSRFRKLSS NNVPRNALVASCLLLLSGITFLYTSDSIMQAFALVTTVAALLFLFTWSLIVVCYIVYRRK RPQLHEESIYKMPGGVPMCWVVLAFFTISLVILTLDPTTRIAVLITPIWFAFIGSMYFVH HRHEQRKEALR >gi|302034478|gb|GL383157.1| GENE 12 12250 - 13764 992 504 aa, chain + ## HITS:1 COG:ECs5186 KEGG:ns NR:ns ## COG: ECs5186 COG1113 # Protein_GI_number: 15834440 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Escherichia coli O157:H7 # 40 483 16 459 470 516 60.0 1e-146 MTGFNQTPDRERYPHALASNEHRGLTAQEPESSPSSPHPEAHLHRNLNNHHIQLIAIGGA IGTGLFLGSGKAIRAAGPSIIVSYLIIGTMLYFVVRAMGELLMYNLDYKSFQDFAADLIG PWAGFFLGWTYWLCWIVTGMAELIGITTYWDFWVKNRGTAALLAAATLFLLLCLNLLTVR MFGELEFWFALIKIIAIISLIVLAIVLAVMKFQFPSGSMASVANLWNRGGFMPNGWSGFF AGFQMAAFAFVGIELIGTTAAETRDPEKTLPRAISAVPARILIFYVGALLAIMTAVPWDE VRADSSPFVQVLGLVGFAGAASVMNFVVLTSAASSSNSGIYSISRMLFGLAHKRMAPKVF GGLSKNGVPRWGLVITVLVLSTALLLAASESFVEAFTLVTTISSVLFIFVWSMIVISYMK YRRVAPAAHAASKYPMPGGRGMCWAVLVFFVFVLVLLAQEADTARALALTPIWFVILGVG WFFDRHHATHDDVGTDEAHPKGDS >gi|302034478|gb|GL383157.1| GENE 13 13991 - 15118 721 375 aa, chain + ## HITS:1 COG:CAC0492 KEGG:ns NR:ns ## COG: CAC0492 COG0787 # Protein_GI_number: 15893783 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Alanine racemase # Organism: Clostridium acetobutylicum # 1 373 1 374 386 255 38.0 1e-67 MPRCPSPSHAIIDLSAIAANLAVVRKRAGDRKVLFAVKADAYGHGAVEVSRYVEKHRYAD WLAVATVAEGQELVEAGITLPILKLSPADPWDMDAAITSGIRLTVVDFDTLEAVSKAAVR LGITAKIHIAVDSGMGRIGLRPECLAELTAAADRAKGVEVEGVFTHLPISDVPEGAEFTR REIDTFMTAVSLIETHRGPFPLVHLANSGAILGHDLGKTSMVRAGIVGYGYDPNPHADRA DLHPALSWISHVTFVKTVSVGDTIGYGRTWTASETTKIATVPVGYADGLSRGLSNKGHVL IRGSVHPIVGRICMDQFMVDLGPDSNVTVGDEVVLIGTQEDETLTADDMAELLGTISYEI TCAISKRVDRYWVGQ >gi|302034478|gb|GL383157.1| GENE 14 15308 - 16732 1132 474 aa, chain - ## HITS:1 COG:VC0611 KEGG:ns NR:ns ## COG: VC0611 COG1109 # Protein_GI_number: 15640631 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Vibrio cholerae # 5 467 2 464 470 501 51.0 1e-142 MADEIEFGTGGWRAIIADTFTRLNVERVAQALADRIHDENQEHRPVVIGYDQRFLSPEFA WWAAEVLAGNDIVVRIIDRPAPTPMIMWTVRDLGCAYGMAVTASHNPATYNGLKVFTEGG RDAKVEITEPIQHRANSISPKDIRRVHRTDALRDGVIEVQTSMNWYIDAILDHVDLEAIR HAHLKVVLDPMFGVSRTCLQTILMTARCDVDTIHERRDTLFGGRLPSPNSRTLQTLAQEV VERGADIGIATDGDADRLGIIDDQGHFLHPNQILVLLYTYLLEDKGWQGPCVRNLATTHL LDRVAEAHGQTCYEVPVGFKWVSSKMAETNAVIGGESSGGLTVQGHIAGKDGVYAGTLLV EMIAKRGKKLSQIYADIEERYGRLEMVEDDFSFAPEDKEYLKRRIYQDKDLPDFGLEVDH ISDMDGVKVYFANGGWIIVRFSGTEPLLRVFCEMPVAQMARECIDKVVKHYHFE >gi|302034478|gb|GL383157.1| GENE 15 16849 - 18039 796 396 aa, chain - ## HITS:1 COG:ECs0785 KEGG:ns NR:ns ## COG: ECs0785 COG0153 # Protein_GI_number: 15830039 # Func_class: G Carbohydrate transport and metabolism # Function: Galactokinase # Organism: Escherichia coli O157:H7 # 7 360 26 350 382 82 26.0 1e-15 MTRWFVPGRIEVLGKHTDYAGGSTLVAAVDRGVTISIEPGDSGITVSTDAAPGELSLAAG HDPKLPAGHWGRYAQAVVDRLAANFGDLAPARIRLTSDLPLASGMSSSSALVSAIVLGLA DFNGLPDTRTWQDNITDDADLAGYLACHENGMTFKNLVGAAGVGTFGGSEDHTAMVCSKD GQLGQFRFCPIRLQQRVPFPEDMSFVVIVSGVAAEKTGAARDLYNAASLATREIIERWNS TTGREDAVLGDALVADPNAEKLHEVVSDRADLTRRLDHFLTESESIIPEASKALACGDLE RFGRMADESQRAAEDLLGNQVPQTSALARIARELGATGATSFGAGFGGSVWALVPNAEAP EFASTWLGKYRDEYSEEAGQAVTVVTRPGPSARRLD >gi|302034478|gb|GL383157.1| GENE 16 18036 - 18872 763 278 aa, chain - ## HITS:1 COG:VNG1055G KEGG:ns NR:ns ## COG: VNG1055G COG1209 # Protein_GI_number: 15790155 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-glucose pyrophosphorylase # Organism: Halobacterium sp. NRC-1 # 13 273 2 239 240 91 26.0 2e-18 MTHDPVAQTAPHKVVIMARGLGTRMRKSVEGVSLTADQAAAASAGVKAMISLDDRPFLDY VISALADAGFDEFCLVIGPEHNVIRDYYDACEKSRLSIVYAVQEHPLGTADAVAAAEEFA GDDRVLVVNSDNFYPEDAVARLREVPASGTLGFTKRAMIAQSNIDPERIRAFALLDSDDS GQLTDIIEKPDPHIVDAAGETALVSMNCFLLTPRIFEACRSIDKSERGEYEIVDAVRWMV EHGEHFDVVPVESGVLDMSNRGDITSVVEALSSREVKL >gi|302034478|gb|GL383157.1| GENE 17 18997 - 19824 229 275 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5366 NR:ns ## KEGG: HMPREF0675_5366 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 275 1 275 275 460 100.0 1e-128 MVTGSNGTSGKKSQASTHTWAILFFLALIVVMRHSALGALLSLVVVMTIIMWVVQRQKAQ AKRVKNGGHHESTSDKQNLGNLNPNPTDDKKVIERRPRSSANRADSFSASPDKGLFGGSF AALTDALPGNVDEPGKHIEPAQPQQHHPAPERGSSQHHAYAPRPSHQPPDSVSFHDPESL RPEISRPGVEPATKPASRVLAPAPPIKTTAPAPAVTQKAASTAAPAKIARGSRFDDNRGG SAAISMTRESATTSLHEVPEYNGSCLSTSSLFAQQ >gi|302034478|gb|GL383157.1| GENE 18 19830 - 20009 66 59 aa, chain - ## HITS:1 COG:no KEGG:PPA2290 NR:ns ## KEGG: PPA2290 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 59 5 63 63 114 100.0 1e-24 MLLVLGSVFLSDPVVARVRKMSARWGLGLDHARSAGGQTYFAVPRDGTANERVFRLPLC >gi|302034478|gb|GL383157.1| GENE 19 20018 - 20920 279 300 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5367 NR:ns ## KEGG: HMPREF0675_5367 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 300 1 300 300 540 100.0 1e-152 MELVDILEANGGVAKISSVGRVARQARRAAREGYVIRPLPRIVMTAMAARHPEAWMRAVR LWRPSAIFTGRAALYLAGMRDLKMTEIDVIVPHSMPRCSRRPWLRFHRAGSEPVIEDRYG VRTTCAYTCFWLALRGDWEAATECLRKGYVATEDLRGVRPKLARKAPSSVVRRVLRQLLD RPWSVAEREIHALFRRHRVSGWKANERLWIDGNAVFPDLWFKKENVVVEIDSYAFHGRPA DYEATARRHALLVGAGLRVIRVTPNMIRDNPELVLDTVRSALWGRHRGVVAAARSGKSGL >gi|302034478|gb|GL383157.1| GENE 20 21170 - 22576 1240 468 aa, chain + ## HITS:1 COG:DR2627 KEGG:ns NR:ns ## COG: DR2627 COG0114 # Protein_GI_number: 15807607 # Func_class: C Energy production and conversion # Function: Fumarase # Organism: Deinococcus radiodurans # 1 463 1 463 464 689 75.0 0 MAEMRIEKDSMGEVEVPAEHYWGAQTQRSLHNFEIGRDTFVWGRDMIRALGTLKKSAALA NKELGELPGDVADLIVQAADEVIAGKLDDEFPLVVFQTGSGTQSNMNTNEVISNRAIELA GGERGSKKPVHPNDHVNRGQSSNDTFPTAMHIAVVCALNKRLYPAVQQLRDTLDEKAKKY DDVVMVGRTHLQDATPIRLGQVISGWVAQIDFALDGIRYADSRARELAIGGTAVGTGLNA HPDFGPTVAKHATEETGIEFKQADNLFAALSAHDALVQVSGSLRVLADALMKIANDVRWY ASGPRNGIGELLIPENEPGSSIMPGKVNPTQCEAMTMVATRVFGNDATVGFAGSQGNFQL NVFKPVMAHACLESIRLIADSCISFDKHCAYGIEPNPDKIKENLDKNLMQVTALNRHIGY DLASKIAKNAHHKGISLRESALTVGGMSEEDFDKWVVPADMTHPSAAE >gi|302034478|gb|GL383157.1| GENE 21 22555 - 22797 90 80 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5369 NR:ns ## KEGG: HMPREF0675_5369 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 43 80 1 38 38 70 97.0 2e-11 MPHTSGVHGLTLRRSLSGRVSPFSVVALGVQFRRNIVPSKRSVSRVFLLSVHKNVGPVTV DAVTGPTCRRGDENHSAALG >gi|302034478|gb|GL383157.1| GENE 22 22797 - 23708 750 303 aa, chain - ## HITS:1 COG:SP1681 KEGG:ns NR:ns ## COG: SP1681 COG0395 # Protein_GI_number: 15901516 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 51 303 30 279 279 137 31.0 2e-32 MAHGKTAVTKDGIPYRPSLDGLPPRSIAPSKAARTITWVILAVVACYFLLPIIWLVIAST KNNTDLVSTSGFAFGEFNWAANWHSLMAWTKGMFPRWVLNSLLYSTVSGVVGTLISVSCG YVISKFRFPGRRVLLVVIMVGLLMPVALLTVPLYLLFIKMHLVNIMWAMIIPSMVSPFGV FLGNVYADSSVPMELLEAARIDGAGELRIFSTMVLRLLAPAMVTIFLFIFVATWNNFLLP LMMITDENLQPVTQGLYGMMAYFAPDKGAVMLASVIGVVPLVILFLVLQRYWQSGLAAGA VKG >gi|302034478|gb|GL383157.1| GENE 23 23710 - 24603 651 297 aa, chain - ## HITS:1 COG:XF2447 KEGG:ns NR:ns ## COG: XF2447 COG1175 # Protein_GI_number: 15839038 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Xylella fastidiosa 9a5c # 7 238 2 236 293 111 32.0 2e-24 MASRKARHEALTGWLFALPFTIVFIIVFVAPIIESIRAGFHKQVAEGGGLYGGGRTVEKF VGLENFQDVCTNPAFWHGIGRVMLFGVFQIPIMILAALFLALVIDSYLVRHLGFWRLSYF LPYAIPGLVAAIMWAYLYVPEISPFAGHLNFSLLSSHVILASMANMTTWTFTGYNMLIFL AALQAIPSDLYEAARIDGASGWEIMTKIKIPMVRGAAMLAVLLSIIGTVQLFNEPTVLAT VATWMPRDYTPMMMAYNTMNGNISPSGAGPASAVSIMMALVAGVLAMIYALVQRKAD >gi|302034478|gb|GL383157.1| GENE 24 24497 - 24703 70 68 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLSMMGATNTMMKTMVNGSANNQPVSASCLALRLAIVDEDMPTPVKNCHGADLPAPFGDH GDRRGLRQ >gi|302034478|gb|GL383157.1| GENE 25 24841 - 26175 1316 444 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5372 NR:ns ## KEGG: HMPREF0675_5372 # Name: not_defined # Def: bacterial extracellular solute-binding protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 444 1 444 444 748 99.0 0 MITRRTRRMASVAAIVAGTLVLGACGSSSGGSGSPGKAASQSAAASGPVTIKYLHRLPDG EGMTKVADIVKKWNSEHPDIKVEATKFPGKANELMPKLEADVKAGTAPCLVQSGYSEVPD MYVKGLVQDVTNEAEKYKGHFSGAYGQMSVGGKVVGLPQDTGPLVYVYNEAEFKKLGIGV PKTSSELLSSAKKAAAKGKYILGFEPDEAQNWLSAQAAAAGAVWYSAEGDKWKVDTNGDK SKVVADFWQKALDDESAVTDARWSDAYTKDLVSGKLIGNIVAAWETGFMLDALDKTSYNG QWRVVQLPSFGGSDMTGPDGGSGVAVVKGCKYPAQAMQFNDWFNTQVNDLATQGLVPAAK GQVTTPEKMKKQFGGQDVMAELAKANERLAPKFGYIPGFTVVGTKMNEKGAGAAAGKAKV GDIFQTAQDTSVQALKDAGLPVNG >gi|302034478|gb|GL383157.1| GENE 26 26374 - 27381 567 335 aa, chain + ## HITS:1 COG:BH3692 KEGG:ns NR:ns ## COG: BH3692 COG1609 # Protein_GI_number: 15616254 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus halodurans # 9 334 3 332 337 152 30.0 7e-37 MSAETGRPTMHEVARVAGVSHATVSRVLNGHTNVAPATARAVADAIITTGYVPNRAARSL RVQSTDTVVLVAREKADVFYSEPTLSPMASGANLRLSEHGYQMLLALVDSSRSAERVGSL IAGGSFDAAILVAMSNDDPLIARLMATNTPLVTSSTPFPGFDIPSADTDNVGGSRAITAR LVATGRSKLVAIGGPSWAPVTQLRLDGFHQGAKNAALGHTTVNEWTLTAGKRAMRELLEL HPDLDGVVAASDLLAAGATRALNEVGRRVPQDVGVVGFDDAPIAALNDPPLSTVRSDARA TGIALADMAIAQIRGQELPQPHLLLPNEVVWRESA >gi|302034478|gb|GL383157.1| GENE 27 27390 - 28082 492 230 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5374 NR:ns ## KEGG: HMPREF0675_5374 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 230 1 230 230 427 100.0 1e-118 MSDENVSPAARLPDGDELTAERPLDPQDLPEHLAEPTQMPSTGPQVAQAVVEAVGGTPRA DGMVDAAEEVRIDVLAFADAPAPGWSTWSTVSLHAEPNAVALVDGTSSDIRAELMVVGAP GSDVMGKVLGSCAFAVLRDHWSMAPGIVFGDVVSMYAPNSTTPHLMWCHPFTTPQLDQVD IGDMKVHWLLGVPITEAERQWLEANGFDVFVELLDAKAVNYTDLQRPSVV >gi|302034478|gb|GL383157.1| GENE 28 28042 - 28257 94 71 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|327334474|gb|EGE76185.1| ## NR: gi|327334474|gb|EGE76185.1| hypothetical protein HMPREF9344_00337 [Propionibacterium acnes HL097PA1] # 5 60 1 56 56 73 75.0 5e-12 MWMSVSHVHTSDFSGGMVSLRGRVQAVDVLSVTLPPSHVGQENPRPGHARAINVTGSMYE RRKRLPSSTPS >gi|302034478|gb|GL383157.1| GENE 29 28208 - 29065 739 285 aa, chain + ## HITS:1 COG:all1413 KEGG:ns NR:ns ## COG: all1413 COG0668 # Protein_GI_number: 17228908 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Nostoc sp. PCC 7120 # 65 281 292 510 536 117 31.0 2e-26 MPPLKSDVWTWDTLIHIAIIIAVAIIARWLLRKGVDWTIHLMVSRSEKREATMPGRTRRI LAEATGASIDRQNQRTATVGGLLSNVGVTIIIIVALLSGFSTIGFKITPILTSAGIVGVA LAFGAQTLVKDVLAGLFIIFEDQYGVGDAVKINEVEGLVEDVGLRVTRIRDWNGAAWYLR NGEITKVGNVTQGWTTSFTDINVHALEDPNQVIRVIRKVLDNLEVEFEGTLLDKPLVLGV GDITGDTMTFQVMTKCIANQHNNVLRALRRECKDAFDAARIRRVF >gi|302034478|gb|GL383157.1| GENE 30 29235 - 30443 764 402 aa, chain - ## HITS:1 COG:BS_yxaA KEGG:ns NR:ns ## COG: BS_yxaA COG1929 # Protein_GI_number: 16081056 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerate kinase # Organism: Bacillus subtilis # 30 352 3 324 382 207 42.0 4e-53 MVIKMGEPVSSHDMVACHAETMRPDPNAPVVVAVDSFKGSLSSGKACRAVRRGFSAADPD REVITIPVADGGEGTVEAVLAAGCHAVTVKCHGATGDLAEVDYAMRDRHAVIEMATCCGL ERADRVSGRPTPRRGLVASSRGLGEVIAAALRKGATDITVGVGGSASTDGGAGMLEALGV RLLDKNLAPISPGAAGLTELTRLDLSGLNRKLSGVELTVACDVTSPLLGPEGAAAVFGPQ KGLDHEGIAIAEAGLTRLADLMEPAIGSTYRDDPGSGAAGGVGWALRCLGAKYRPGAAAM LGWAKAVSKISGAGLVVTGEGRLDRQTLLGKLPDTIRKIALDAGVPVWAVCGRCDLPEEK RRVFERIICLSDIEPDVEASMAQAGPLLSRAVEQAVREELGR >gi|302034478|gb|GL383157.1| GENE 31 30533 - 30748 172 71 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5377 NR:ns ## KEGG: HMPREF0675_5377 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 71 14 84 84 102 100.0 6e-21 MVNRAYLSLSVLALVLWVAAYRHLPGWAAGITLACIVLFSLFCEWSRVRTLARIGKSRGT AAQSSRGRKLS >gi|302034478|gb|GL383157.1| GENE 32 30854 - 32353 1189 499 aa, chain + ## HITS:1 COG:ML2697 KEGG:ns NR:ns ## COG: ML2697 COG0617 # Protein_GI_number: 15828457 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA nucleotidyltransferase/poly(A) polymerase # Organism: Mycobacterium leprae # 38 497 20 480 486 503 57.0 1e-142 MPEKNINSTTMLPAALRPTPDESGMTVPQLLEHRINALFEQIPLVAELGEAFAQAGHDLY LVGGSVRDALMGRLGHDLDFTTDARPDDTEAILRQHTHATWDIGRAFGTIGAQIDDWVVE VTTYRADAYHPDSRKPEIVYGETLKDDLIRRDFTVNAMALHAATRTFSDPYAGLTDIVSG ILRTPFPPERSFSDDPLRMMRAARFTSQLGFTVTNEVRAAMTDMASRIEIISAERVRDEL SKTLLTDHPREGLDLLVTTRIADYVLPELPALSLERDEHHRHKDVYEHSLTVLDQSIDLE KRRGHDPDLTGRLAALLHDIGKPSTRKFEPGGKVSFHHHDIVGAKMARKRLKALTYPSQV VKEVSKLVELHLRFHGYGDQGWTDSAVRRYVRDAGDQLERLHILTRSDCTTRNRRKAERL EFAYDDLEARIANLTAKEELAAIRPDLDGQQIMAILGIKPGPEVGKAYKFLLNLRLDEGP HTPDEAKNALLAWWATQDR >gi|302034478|gb|GL383157.1| GENE 33 32350 - 32574 126 74 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313765088|gb|EFS36452.1| ## NR: gi|313765088|gb|EFS36452.1| hypothetical protein HMPREF9567_00727 [Propionibacterium acnes HL013PA1] hypothetical protein HMPREF9574_02643 [Propionibacterium acnes HL074PA1] hypothetical protein HMPREF9580_01801 [Propionibacterium acnes HL087PA2] hypothetical protein HMPREF9585_00194 [Propionibacterium acnes HL083PA1] hypothetical protein HMPREF9587_00671 [Propionibacterium acnes HL025PA1] hypothetical protein HMPREF9589_01500 [Propionibacterium acnes HL059PA1] hypothetical protein HMPREF9593_01955 [Propionibacterium acnes HL046PA2] hypothetical protein HMPREF9604_00917 [Propionibacterium acnes HL036PA1] hypothetical protein HMPREF9605_00031 [Propionibacterium acnes HL036PA2] hypothetical protein HMPREF9612_00741 [Propionibacterium acnes HL063PA2] hypothetical protein HMPREF9616_00109 [Propionibacterium acnes HL007PA1] hypothetical protein HMPREF9617_02120 [Propionibacterium acnes HL056PA1] hypothetical protein HMPREF9597_00454 [Propionibacterium acnes HL005PA4] hypothetical protein HMPREF9598_01952 [Propionibacterium acnes HL050PA1] hypothetical protein HMPREF9600_00040 [Propionibacterium acnes HL050PA3] hypothetical protein HMPREF9606_00896 [Propionibacterium acnes HL036PA3] hypothetical protein HMPREF9608_01884 [Propionibacterium acnes HL067PA1] hypothetical protein HMPREF9609_01573 [Propionibacterium acnes HL027PA1] hypothetical protein HMPREF9613_00320 [Propionibacterium acnes HL002PA1] hypothetical protein HMPREF9614_00575 [Propionibacterium acnes HL002PA2] hypothetical protein HMPREF9620_00933 [Propionibacterium acnes HL037PA1] hypothetical protein HMPREF9564_00098 [Propionibacterium acnes HL053PA1] hypothetical protein HMPREF9566_00385 [Propionibacterium acnes HL045PA1] hypothetical protein HMPREF9594_00837 [Propionibacterium acnes HL005PA1] hypothetical protein HMPREF9595_01624 [Propionibacterium acnes HL005PA2] hypothetical protein HMPREF9596_00286 [Propionibacterium acnes HL005PA3] hypothetical protein HMPREF9615_00849 [Propionibacterium acnes HL002PA3] hypothetical protein HMPREF9583_00137 [Propionibacterium acnes HL038PA1] hypothetical protein HMPREF9590_02503 [Propionibacterium acnes HL059PA2] hypothetical protein HMPREF9592_00966 [Propionibacterium acnes HL046PA1] hypothetical protein HMPREF9602_01320 [Propionibacterium acnes HL030PA2] putative DNA-binding protein [Propionibacterium acnes HL096PA2] hypothetical protein HMPREF9568_01798 [Propionibacterium acnes HL013PA2] hypothetical protein HMPREF9571_01352 [Propionibacterium acnes HL043PA2] hypothetical protein HMPREF9570_00338 [Propionibacterium acnes HL043PA1] hypothetical protein HMPREF9581_00366 [Propionibacterium acnes HL087PA3] hypothetical protein HMPREF9586_00627 [Propionibacterium acnes HL083PA2] hypothetical protein HMPREF9579_00437 [Propionibacterium acnes HL087PA1] hypothetical protein HMPREF9563_00673 [Propionibacterium acnes HL020PA1] hypothetical protein HMPREF9588_00537 [Propionibacterium acnes HL025PA2] putative DNA-binding protein [Propionibacterium acnes HL099PA1] # 1 74 15 88 88 109 100.0 7e-23 MGVLGSPVGGVTEVIATLTNPEAVRAWAGDDPVTTVAKTINRPSSQAAGRRREGEGTSVM VVGRPASAVTIRKV >gi|302034478|gb|GL383157.1| GENE 34 32456 - 34537 1114 693 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5379 NR:ns ## KEGG: HMPREF0675_5379 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 693 21 713 713 1183 99.0 0 MVLATVVTGSSPAQARTASGLVKVAITSVTPPTGDPKTPITIKGTVTNTSSVSMTWVQAS FWRSQDEINDTRDLSDLLASPATVPVGMRWFREPKEASIFNITDPEANQTFKPGDTGSFT VTGTPAQMGLTTPNAVYAVGVHVQASPGNQPRRTVGRARVLTVLSDAHTSANLAPVIVLS APPSRRIDGTFTDESLSDDITRRLKPLAEAAHTRNATVLVDPSLIDEVRAMASGYLVAGK GSHTVAGTGQEQAKEWLNLVEPLLSSGRAYRLPYGNADVIGAARQGRSSLLLTVKHAVDP SNPAAHLPLAIIDPAAELDNSSFKTLAKELSPSVILTCAASVRKGVREDFGVKIVGLADT VRTSGHPQSNSDSQRRGMLLSQALLMTRESIPAVTLVTTVNDVQATAPVSWLHLQNLSTI LNGAKPALHLPESHAGNTILKDSWWQIQHDVGVDADGWSDLVGASPETASLTSAKFVSRT LSASLKDREAWATDVMRPASEVIAGNGLVLHSASHFVMSSSRNEFPLTITNSLAQTVRVK VVVTSENPQRIDIPDTQVVAIQPKETQTIKFAPKASSNGVVEMQAHLSTPSGRLLGSQST FVVKATQMDDVGWIIIVVSALVLIIATVLRIRQVTANSQRDTETAARDAKQPATKLDDIS DSTPATPAQQDQEAASSDDSARSSHTDTGDLTA >gi|302034478|gb|GL383157.1| GENE 35 34611 - 36416 666 601 aa, chain + ## HITS:1 COG:CT673 KEGG:ns NR:ns ## COG: CT673 COG0515 # Protein_GI_number: 15605406 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Chlamydia trachomatis # 37 174 15 153 490 61 30.0 6e-09 MSFEDPADRYRDPYDSGSYEMDNLPHLSAGSFLGGRYRLDQEISRPEPSLAWRAFDTKLH RPVLIYALAPHGRRTPAVLDAARRAAVATDSRFLRVLDAVVAGPGEPASWVVSEYAPGKS IEELLETGPLSALEAAWIAHEIADAMAPLHAQGVFHERISPGTVLVTSTGNLKISGLLIE AALHPRPGDISRSWPDREVVDVTDIGRVLYACLVSRWPNGQGHRPFVEPATAMSWGLPPA PTDAHGWLTPREVRAGVSPTLDVLCDQILSRVPHYDEVPLRTANEIAQSLGRTLGSADAA ADLERRIRFPVDQTSQAEKDPWWSDESSASVAPQDPDEPERAKEYGPDEEGYWSPEAAAG EWGRRSGPLPWSGRNDPHITQLPPQDWPNDAEDEPVFTKARPHNRRWPPILVAVTAVVMV VCLIAVGMRHSDSGASQTSSNPTTVKLTHVQEFDPSEDGGDAKENHNQVKFAIDGNPSTA WHTVVYRNSAKLGNLKPGVGLVVDLGRVTKVTSVKVRLVGSGTDISLWEPTHDVSSDQPP MKTIKEWTRVAAVTGAGKIVTLKPSENTKTRHLLVYLTELPAKSATRFQGGIADITVVGS S >gi|302034478|gb|GL383157.1| GENE 36 36766 - 38289 1680 507 aa, chain - ## HITS:1 COG:MT3798 KEGG:ns NR:ns ## COG: MT3798 COG0554 # Protein_GI_number: 15843314 # Func_class: C Energy production and conversion # Function: Glycerol kinase # Organism: Mycobacterium tuberculosis CDC1551 # 6 502 16 515 517 590 59.0 1e-168 MSDEKFVLAIDEGTTSARAIIFNHAGQIMAVGQQEFEQIFPRAGWVEHDPIEIWEAVRDV VGLALTKANINRHQLAAAGITNQRETAVVWDKNTGEPVYNAIVWQDTRTQKICNELAGDK GADRYKEICGLGLSTYFSGPKVKWILDNVEGARARAEAGDLLFGNMDTWVLWNLTGGING GVHITDPTNASRTMLMDVRKLQWDDSMCEVMGIPKSMLPEIKSSSEIYGYGRKNGLLIDT PISGILGDQQAATFGQACFQKGMAKNTYGTGCFMLMNTGEEAIFSENGLLTTVCYKIGDQ PTVYALEGSIAVAGSLVQWLRDNLKMFETAPQIEALANTVEDNGGAYFVPAFSGLFAPYW RPDARGALVGLTRYVNRGHIARAVLESTAFQTREVLEAMNADSGVPLTELRVDGGMTANE TLMQFQADQVNVPVVRPVVAETTALGAAYAAGIAVGFWEGENDVTDNWAEDKRWEPKMDK NERERLFRNWKKAVTKTFDWVDDDVKE >gi|302034478|gb|GL383157.1| GENE 37 38261 - 38392 66 43 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MASTNFSSLMLVAFLICIDVSDTLRLTRNQCVTRGIPTHQKME >gi|302034478|gb|GL383157.1| GENE 38 38374 - 39126 875 250 aa, chain - ## HITS:1 COG:L0015 KEGG:ns NR:ns ## COG: L0015 COG0580 # Protein_GI_number: 15673226 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) # Organism: Lactococcus lactis # 16 248 11 238 245 187 49.0 2e-47 MLLETAVPGATIFGSEFLGTLILILLGCGVVANNLLPKSKGHANAPGSLQINWGWGFGVM FGVYAAYKTGGHLNPAVTVGLAIAGKDLAPGIPATAGNITIYILAQFAGAFVGAVLCWLA YKQHYDEDCDPALKLGTFATGPEVRNPLWNTITEAIGTWVLVLWVILSGFTQGVKIGPLA VGLLIVSIGASLGGPTGYAINPARDLSPRIAHAVLPIKGKGDSDWGYAWVPVVGPMIGAV LAALTYSIFW >gi|302034478|gb|GL383157.1| GENE 39 39315 - 40262 670 315 aa, chain + ## HITS:1 COG:DR1935 KEGG:ns NR:ns ## COG: DR1935 COG2390 # Protein_GI_number: 15806934 # Func_class: K Transcription # Function: Transcriptional regulator, contains sigma factor-related N-terminal domain # Organism: Deinococcus radiodurans # 14 312 45 345 348 208 41.0 1e-53 MNELSNDVWTAASMYYMQGETMDAIASHLGTSRSTVSRLLKQARLSGVVRITLSEPTGLR SGLDSTLTRMFGVNTTVVPVKSGTTEIHRLDQVARIAGQMVTDMVEDNSAVGIAWGTTLD AITHYVVPKDVKGVSVVQMNGSANPASSGIPYVGSILSRMAAAFGGEVIHFPVPTFFDSA STKAAMWQECSVQAVLKAHRELDLAVFSVGALDSPVPSHVYSAGYMTDEEKANLVHAGVV GDVNTVFLKADGAYDVEFNKRATGLAPFQLQRIPRRLCVVAGRAKAVGLLAALRARVATD LVVDDATARAVLDLM >gi|302034478|gb|GL383157.1| GENE 40 40333 - 41748 815 471 aa, chain - ## HITS:1 COG:Cj1228c KEGG:ns NR:ns ## COG: Cj1228c COG0265 # Protein_GI_number: 15792552 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Campylobacter jejuni # 179 458 104 359 472 175 43.0 2e-43 MSESTNGPQEPREPNSFPRASAEGGYSSHSEDARQGWAQESYWSHSDDTRSSSGDSPTTQ RQPWESSEQPTAIDPNLGNKNAGSPQPSSRSGRKGFRGGTIVLAALLAAAVGGVSGGLVD RSLTKNDTPAVATKSAAPNTVTKVVQGSSSAPDWTATASAISNSVVSITVTTGNGGGEGS GVVVDSNGDIVTNNHVVSDAASGGQLTVSMGNKTYDAKVVGSDPSTDLAVIRVTNPPESM KPMRFANSSKLTVGAPVMAVGNPLGLSGSVTTGIISALNRPVTTMSRDDSDDVLGSYDSS SGVVVTNAIQTSAAINPGNSGGALVNANGELVGINSSIASLPSADRSQSGNIGIGFAIPS NLAKSVADQIIRTGKVTHAFLGISVRDAAAVKAGVKVRGAGIATVIPSSAAGKAGLRRGD VITRIDDTDIASGESLVGLIRSFKAGQKAKISYIRGSQEGTVDVTMGTAKA >gi|302034478|gb|GL383157.1| GENE 41 41876 - 42547 302 223 aa, chain - ## HITS:1 COG:AGl3408 KEGG:ns NR:ns ## COG: AGl3408 COG3534 # Protein_GI_number: 15891822 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-L-arabinofuranosidase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 110 184 165 239 503 75 45.0 5e-14 MGTSIPGWSAPDCRNSMAADLDEVLYPCTSVRVYVGTLMYNVRNSVDGHPGCFGNIHKAR CHGQDLMISNGGSAMSGERLVRALHLSLYRCYNLWQRCKKLRLGGSLARQQWGLGNEMDG PWQMGHKTPEEYARAVTEVANTFHRFDDNPIVATCGSSGRSMPIFGRRERVVADAAFDSL DLVSATPTTNPIDDDFIRLGVVAVGRTRIVVHRDSDPRTNLSC >gi|302034478|gb|GL383157.1| GENE 42 42680 - 43732 662 350 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 45 348 3 306 306 259 46 2e-67 MTTQALTPNTILGNISLSDPSEIDTTQPFPETVGADVHGNDEPRDVIIVGSGPAGYTAAV YTARAGLKPLVFEGSMDAGGALMQTTEVENYPGFSEGIMGPDLMAQMRAQAERFGAELIA DDVTDIDLTGEIKKLVDTDGNTYKAHVVILAMGSAYRKLGLEDEPRLSGRGVSWCATCDG FFFTGKDIAVVGGGDSAVEEATFLTRFANSVTLVHRRDQLRASQIMADRAAADPKITFAW NSEVVAMQGESKLESITLRDTKTGEERQLEVAGVFEAIGHDPRSELVRGQVDLDDAGYVV CAEPSTRTNVPGVFACGDLVDSHYQQAVTAAGSGCRAALDAERFLTELGR >gi|302034478|gb|GL383157.1| GENE 43 44215 - 45027 520 270 aa, chain - ## HITS:1 COG:Rv3300c KEGG:ns NR:ns ## COG: Rv3300c COG0564 # Protein_GI_number: 15610436 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthases, 23S RNA-specific # Organism: Mycobacterium tuberculosis H37Rv # 31 262 65 285 305 204 51.0 2e-52 MGGQRVDEMLDEGRFVDESGRTFRRDSPFTPQTFVFFHRDLPTETPVPAGIGILYSDERI LVVDKPHFLSSIPRGRHVLESVVVRLRTQLGLPELTVAHRLDRVTAGVLLLTRERKWRRP YQEIFERREVVKKYRLVAPVVHDPAGEGVTATKSGWQVRSRIIKERGILQAREVPGVPNA VTDIALIGEHGGWGLYEASPRTGRTHQIRLHMQRLGAPIVNDPFYPVVLDTPVDDFTHPL QLQAWRMGFTDPVTGDPRAFTSRLRLAAWQ >gi|302034478|gb|GL383157.1| GENE 44 45429 - 46676 969 415 aa, chain + ## HITS:1 COG:CC2315 KEGG:ns NR:ns ## COG: CC2315 COG0477 # Protein_GI_number: 16126554 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Caulobacter vibrioides # 48 415 44 418 418 157 34.0 5e-38 MTITPREGAQPQHRQCASTGRLSAVMFIGQLGWAAVGAACGTLLAALAAEVKPEDKVDLL ALLTTTGAIAAVSCMILAGTLSDRTRSKLGPRNPWIIGGAIVGTLAFACIGLTRNPALLV VAHMVYQGGLNCMLGAFNAIPPDYVPNSVLGKVSAFGGAGYLLAQIIGAVIAGTLVTHPS QGFLMAAWIMLVSSIIVVILLPPHPLRNRSPRPPVTWRQFGAQMRPPSDGQFWWILVGRF LFVISLFMVMQFQLYIATDEMGMTRATAGRLIAMNSAVLAVTAVVLDVITGPWSDKIKRR KPFTMIAPLVAGVGVIPLFLVNEPWTLTIFAAIGGAAFGTYMAVDGALMVEVLPDRDDAA RDLGFLNAANSLPIVFAPGIGATLVKTVGYPGLFTAAIILAILGSLCITRVRRVK >gi|302034478|gb|GL383157.1| GENE 45 46678 - 47607 725 309 aa, chain + ## HITS:1 COG:SSO2521 KEGG:ns NR:ns ## COG: SSO2521 COG0657 # Protein_GI_number: 15899257 # Func_class: I Lipid transport and metabolism # Function: Esterase/lipase # Organism: Sulfolobus solfataricus # 1 309 1 308 311 158 32.0 2e-38 MKLDPRLAEILGRQPKEEQTLAEKRARQNDVAARLRGKITPAVPDSVILEDRTVPGRTHP IPVLIQRPKGLPNPAPVLVWAHGGAFVHGSPRTVLSRTASIAQRAGVCVVSVDYRLLPEH NYPENLHDVVDVVRWVAKTGLDKGFDTSRILVGGDSAGGNLAAATGIMCRDEGNPAILGQ ILEVPILDLSDTSEAMAEARRDAPDLAAALHHSHVRYLSHGASLDNPLTNPACLENAHGL PPTFLLNCEVDPLRDDSIAWQHKLQDAGVPVELTTVRGMAHGTQSFTLAFPQARDAEDKI ITWLRDLIS >gi|302034478|gb|GL383157.1| GENE 46 47731 - 48168 351 145 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5391 NR:ns ## KEGG: HMPREF0675_5391 # Name: not_defined # Def: OsmC-like protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 145 1 145 145 251 100.0 8e-66 MPSATKKVSLVRRSEGHYTATNARGGQIRFGAGKDAEFTPVELLLAAIGGCSSIDVDTVT SRRGEPTQFTVSVSGTKRSDEEGRASLGDVAVDFQLSFPDTEEGREAAGLVNRVVTMSRD KNCTVSRTVEAQTPVAFSIAGEPLD >gi|302034478|gb|GL383157.1| GENE 47 48178 - 48504 434 108 aa, chain - ## HITS:1 COG:Cgl3031 KEGG:ns NR:ns ## COG: Cgl3031 COG0526 # Protein_GI_number: 19554281 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Corynebacterium glutamicum # 1 105 1 105 107 106 46.0 1e-23 MNNVIEVTDATFASEVLGASKPVLVDYWADWCAPCKQLSPIIEELAGTYGDRMVFAKVDT NANTRVAAEQGIMSLPTIQVWQGGQLVKSLQGGKTKKALVKIIEEFVA >gi|302034478|gb|GL383157.1| GENE 48 48491 - 48706 140 71 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|327448789|gb|EGE95443.1| ## NR: gi|327448789|gb|EGE95443.1| hypothetical protein HMPREF9570_00352 [Propionibacterium acnes HL043PA1] # 5 71 1 67 67 106 100.0 6e-22 MTLFMTAFLRRPDESKSWRFERHLSFTKAKRTLGVLHEAAITRCEKSRSKDASRTTVPGP HLGRYFSHTRR >gi|302034478|gb|GL383157.1| GENE 49 48745 - 49812 962 355 aa, chain - ## HITS:1 COG:AF0871 KEGG:ns NR:ns ## COG: AF0871 COG0240 # Protein_GI_number: 11498477 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Archaeoglobus fulgidus # 4 318 3 285 335 137 29.0 4e-32 MLRIAVLGAGVMATALTFPAVENGNEVRFIGTHLDDDIIDSIQATRQHPVLELKVDERAK AYHFANAAEAIEGADVIMSGVNSFGVDWVGRQLAKLAKPGQIILCVTKGMQADEDGTLHI LPEVLKKHMGNLADEAHWAAIVGPSNAGELAVHRDTRVVFCGEEQEVRDRLVAAYRTDYY HVWTSTDFVGHEVGACMKNIFAFGGGFAAGMLDKAGQTDAKYVMYDYTAALFGEGARELK QMVAFMGGDPEVATGLGGVGDMFVTTMGGRNVRARTYVGAGVPFSQIRNVKMKGITLEGV AAIGVVGEAIEKLTRRGVIAETDYPWCAPSTTSLLTMLPSICPGRSSSAEKSDVG >gi|302034478|gb|GL383157.1| GENE 50 50012 - 50344 69 110 aa, chain - ## HITS:1 COG:SMb20851 KEGG:ns NR:ns ## COG: SMb20851 COG2390 # Protein_GI_number: 16264892 # Func_class: K Transcription # Function: Transcriptional regulator, contains sigma factor-related N-terminal domain # Organism: Sinorhizobium meliloti # 3 92 204 293 326 63 35.0 6e-11 MSVSRPLEAAQNADLVVYSPGTVSADSILVTAGHVTTNGIDQLRSKGASADIMSHYVDAH GRVVDEELDARTISVDLDGVKVRDDGATVAPGLGAYWSSHPEPKKQRLWG >gi|302034478|gb|GL383157.1| GENE 51 50223 - 50813 157 196 aa, chain - ## HITS:1 COG:SMb20851 KEGG:ns NR:ns ## COG: SMb20851 COG2390 # Protein_GI_number: 16264892 # Func_class: K Transcription # Function: Transcriptional regulator, contains sigma factor-related N-terminal domain # Organism: Sinorhizobium meliloti # 1 135 8 144 326 79 34.0 6e-15 MSNRRRANQDKEMLHVAEMYYFEQMTHAAIAQRLSISRWTVGRILEEARRTGMVKITIDH PLARYHRFETELVDTFGLQSAVVVPVQANDELTMEFVTRMAAQRLSEWRPRPRVVAVSWG RTTAHVAQHLGSGWNPHLASPDRRGISRFRGDAALGRVRFASPGGCPKRGSRGVFARNGE RRLDFGDGWSCDNQRY >gi|302034478|gb|GL383157.1| GENE 52 50823 - 52886 1926 687 aa, chain - ## HITS:1 COG:MT1496 KEGG:ns NR:ns ## COG: MT1496 COG0021 # Protein_GI_number: 15840908 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase # Organism: Mycobacterium tuberculosis CDC1551 # 7 673 44 711 725 780 60.0 0 MATELTWTDTDRLAVDTARVLAADAVEKTGNGHPGTAISLAPLGYLLYHKVMSIDPSDPN WLGRDRFIMSAGHSSLTQYTQLYLAGLGLELSDLESLRTWGSLTPGHPEYGLTKFVETTT GPLGAGVANAVGMAMAARRERGLLDPDAAPGTSLFDHYIYAIAGDGCMQEGIASEASSLA GTQELGNLIMFYDDNRITIEGDTAIAFSENVEARYEAYGWHVQHVDFTNGGTTYEENVEA LMEAIDNAKTVTDKPSFIRLTTVIGWPIPKLAGLAQVHGAKIGAEGVSALKEKLGFEDKP FAIDLEMVQQVRAAFAERGKGLREVWDEKFAAWHDANPDGAALLERMLAHKLPDDLDIPT FEPGKMSTRKASGAVLSALGPQLPELWGGSADLAGSNNTTMKGADSFLPEDRCSEKDPGG PYGRTIHFGVREHAMGGILNGITLAGLTRCYGGTFFVFSDYMRPSVRLAALMKIPSIFVW THDSIGVGEDGPTHQPVEHLASYRAIPGLDIVRPADANETAVAWRTIVEHTDRPAGLVLS RQDLPTIDRSKYASAEGVARGAYVVCEASAEPKVILIGTGSELSVALEAREKLEADGIAT RVVSMPCQEWFDEQDEEYRESVLPSSVTARVSVEAGIAMGWAKYVGCKGASVSLEHFGAS ASGALLFEKFGFTADHVAEVAHTVFME >gi|302034478|gb|GL383157.1| GENE 53 53023 - 54732 1296 569 aa, chain - ## HITS:1 COG:BS_araB KEGG:ns NR:ns ## COG: BS_araB COG1069 # Protein_GI_number: 16079931 # Func_class: C Energy production and conversion # Function: Ribulose kinase # Organism: Bacillus subtilis # 5 547 3 549 560 517 47.0 1e-146 MNNNYVVGLDFGTLSGRAVVVRANDGAEMGAAVHEYPHGVMDRTLSAADGRKLPPDFALQ DPVDYLETLETIVRGAVKDAGVDPDHIVGIGLDVTSATVVAATKDGTPLCQLPEFRNEPH AWVKLWKHHGAQDQADRIVKLAQVRREPWLTRYGGILSSEMLMPKVLETLERAPQVYRAT DVFCNVLDWLTWRLTGVLAFSTGDSGYKRMYQDGKYPSRDYLMNLNPEFADVFAEKMNAP VLPLGARVGGLTPEFSERLGLPVGTTVASGNIDAHVTAAAVQAVENGQMTAIMGTSACYV VPGPQLKEVPGMFGVVDGGIVDGSWGFEAGQTAVGDIFAWFIDNCVPGSYFDEADHRGIG VYDLLTEKCARQEVGAHGLIALDWHNGNRSVLADANLSGMILGQTLTTTPEDQYRALLES TAFGARTIIESFRDSGVEINELVVAGGLTKNTFLMQLFCDICRVPLSVGTIKQPGAHGSA VFAAVAADLYPDVKAASAAMGAKKAGVYQIDEQRAEQYDALYAEYARLHDYFGRGGNQVM HRLKEIRRQAHLRARESTETSNGGNGAHL >gi|302034478|gb|GL383157.1| GENE 54 54805 - 56169 1201 454 aa, chain - ## HITS:1 COG:BH1862 KEGG:ns NR:ns ## COG: BH1862 COG0371 # Protein_GI_number: 15614425 # Func_class: C Energy production and conversion # Function: Glycerol dehydrogenase and related enzymes # Organism: Bacillus halodurans # 14 428 25 394 399 149 28.0 1e-35 MSELIDKALADCGDTDVVVMGRNVLEETGRVFKELFGDAKVIIIADENTWAVAGEQTKAS LEGAGVETVEPMIFPGRPAVYACYANVEKIRDHMRDLDGVIACSIGSGTLNDITKRASDE LGRRYMNVCTAASMDGYAAFGASITENGFKHTMSCRAPQALIADLPTMAGAPQRCTATGL GDLIEKVPAGADWIVADELGIEPIDDEVWDLVQGPLTSAISDPEGLANGKPEAFDGLIEG LVMSGLAMQKYRISSRPASGAGHQFSHLWEMEHLGMDQDPPLTHGFKVGLGTISVLALWE RTLNHDFSTLDVDAAVAKWPSAEEMEAKVRANFTGDMLEPAVRQTMDKYLDADALRERLE LVKSTWPTVRERCRSQVMPAAKVEEIIKTVGGIYHPAQIGLTRERFHDTYYRCQMIRSRY TLLDLLVETGTIGDLVESLFEPDGFWGRRPWPQD >gi|302034478|gb|GL383157.1| GENE 55 56153 - 57757 1205 534 aa, chain - ## HITS:1 COG:SMb20852 KEGG:ns NR:ns ## COG: SMb20852 COG1069 # Protein_GI_number: 16264893 # Func_class: C Energy production and conversion # Function: Ribulose kinase # Organism: Sinorhizobium meliloti # 8 512 4 497 509 248 33.0 2e-65 MLNNGPYLLGIDYGTESCRVAIFDLAGRPLTFAATPYKTTHPRPGWAEQDPEEWWKALQA SCHRAIAAAGISPAAIAGISYDATTLTMVAMDERGNELRPAMMWMDVRATEQAARAENSD SVARLYNGAGVSPATAEWYPFKAAWLREHEPETYRRAAHLVDAPDWVTFKLTGEWTTNIN SAAIRMYYNRDKGGWPEDFYETIGCDDVFDKIPGRVLDLGTPVGTLGTIPAQLLGLRPGI PVAQGLGDAWAGQIGLGVLAPGSMALITGSSHVLTGQSDTEIHGEGFFGAYSDAVMPGQY TVEGSQVSTGSVLKWFKANFAADYTAAAEKIGLNPYDVLNEQSRNIRPGSDGLIINEYFQ GNRTPYTDSKARGIIWGLSLMHTPAHFYHAIQESVCYGTAHNLRAMKAAGFEVDRMVACG GATKSRDWIQMHADVPGVPIVLTEVGDAVVLGTCMVAAVGAGLFKDLPEAATQMVHEIDF IEPDQERHEEYQYYVDKYCDTYPQLCPMIHDMVDHEADKTDDHTDQRRSNVRID >gi|302034478|gb|GL383157.1| GENE 56 57814 - 58671 731 285 aa, chain - ## HITS:1 COG:VNG0719G KEGG:ns NR:ns ## COG: VNG0719G COG0647 # Protein_GI_number: 15789896 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar phosphatases of the HAD superfamily # Organism: Halobacterium sp. NRC-1 # 12 271 29 286 288 169 39.0 6e-42 MHDVIDIPTDFARAYVFDMDGTIYLGEHLLPGARRMIEELRRREIPVRFLSNNPTKDPDQ YVDKLTRLGLPTAIEDISNTVVTTTRWLVNNHPDAKVFAIAEEPLKRSLREAGIELCEDP EKIDIVIASYDRTFDYRKLQIAFDAIWFHKRAFLIQTNPDRFCPFPGGRGEPDCAAVTAA IEACTGQQCKVSLGKPSPVMLTEALSGLDVDPTDCVMVGDRLQTDIQMALDTGMKSACVL TGEATADDVAALDVEHRPTWTLDRIDRLIPASAWRELGWTEDNDD >gi|302034478|gb|GL383157.1| GENE 57 58694 - 59773 1131 359 aa, chain - ## HITS:1 COG:no KEGG:PPA2323 NR:ns ## KEGG: PPA2323 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 359 23 381 381 616 100.0 1e-175 MFTTSVGVFVFGLLATIAGGAVGAAIGGNYAFVLTGFCVLASWGVFAATGNTFGLDYLAF GPFMGPHIAFAGGVAAAIYARYRGHLGDGKDVNTPLAGIGHPDILCVGAAFGIFGYLCQI GISNIPWFGKHTDPVALTVLLSGLLARLIFGGVPGKGLFHGSLHNPELFHENATSFPAKI KPGPNGRWLEWQEKPSQLLTIGSLFGIFAGGASLFLAANVGAYLTTRGLANNLAAANANS FCFGISAVIILFLITNRNMPVQHHVTNIAGLAAVQFFPLLMGKTLTTYHWTYTSSWDSHT WGMATVALVIAAFFGVFTAGLGEFCARLWYNRGTSHIDPPAAAIWLGNTVVVSLATLFS >gi|302034478|gb|GL383157.1| GENE 58 59917 - 60399 517 160 aa, chain - ## HITS:1 COG:YPO3353 KEGG:ns NR:ns ## COG: YPO3353 COG0698 # Protein_GI_number: 16123503 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase RpiB # Organism: Yersinia pestis # 3 149 2 146 151 107 43.0 8e-24 MGLRIVVAADPAAVEYKDVVKADLEADSRVDDVIDVGVQAGDDTLYPHIGIKGAHVIKDG KADRGIFFCGTGMGMAITANKVPGIRACTAHDSFSVERLIMSNDAHVLCLGQRVIGRELA RRLAHEFIGYTFDPSSHSKANIDLIDAYESGAGESAPGNC >gi|302034478|gb|GL383157.1| GENE 59 60616 - 61134 312 172 aa, chain - ## HITS:1 COG:TM0283 KEGG:ns NR:ns ## COG: TM0283 COG0235 # Protein_GI_number: 15643052 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Thermotoga maritima # 1 162 91 252 254 159 46.0 2e-39 MTPDDMVVVDSEGKIIEGDRGPSSDTASHLYVYRRRDDIRSIVHTHSTFATAWAATGQDI PYSLAAVADEFGGPVPCAGYAHIGTEQIGEQVMRFIDQCPAVLLRKHGVFTVGASIEKAL KAAVMVEDVARTLAYATMIGDISSLPQSEIDANHDRYINRYGTATASTGVTS >gi|302034478|gb|GL383157.1| GENE 60 61186 - 61992 502 268 aa, chain - ## HITS:1 COG:BMEII0436 KEGG:ns NR:ns ## COG: BMEII0436 COG1349 # Protein_GI_number: 17988781 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Brucella melitensis # 8 264 11 271 282 176 38.0 4e-44 MSKKEGAPRGGPRARQFAIAEAVVRAGSVSVEDLVESTGVSAMTIYRDLAILESSGVLQR HRGRVVAVANGLHEADAAFRLEQSSSDKQAVAELASDLIAPGSSIMLDDSTSGVWVLRSL PEHTPLTVVTNSLLVAKEVITTSSDKLVVTGGEYQSWAQSLMGPAAVRMIRSMHADLCFL SASGIFEAGCYHPYQEVVEVKRAMLESAETRVLLLDHTKFGRRALFKFADLTEFDHVVVD AHTPRGILSQLSDLGVHLMVVETSASRS >gi|302034478|gb|GL383157.1| GENE 61 62266 - 63333 846 355 aa, chain - ## HITS:1 COG:TM0069 KEGG:ns NR:ns ## COG: TM0069 COG1312 # Protein_GI_number: 15642844 # Func_class: G Carbohydrate transport and metabolism # Function: D-mannonate dehydratase # Organism: Thermotoga maritima # 1 351 3 354 360 413 53.0 1e-115 MTFRWYGAETDPITLENIRQIPGVSGIMGAMDWIPVGEMWSDEEISSYVRKVNDAGLECE VIESVNVHEDIKLGKPSRDIYIANYCKTLENLAAHGIKVVVYNFMPVFDWLRTELFHRNE DGSTCLYYDHEELVGLTPQDIVKATLDSSAFPLPGWEPERLADLDEVMAQYTDMPRDQLR NNYRYFLEGIVPTCEKVGIRMAVHPDDPAWGIFGIPRIVHSDSDLQRIVDLVNSPANSLC VCAGSLGSNPDNDVPAILAKYGDMGRVAAAHVRNVKFLGSKKFKEASHLSSDGSLDMYAI MKSIHDHCSNSYIRPDHGRMIWGETGRPGYPLYDRALGITYLNGLWEAIEKASAY >gi|302034478|gb|GL383157.1| GENE 62 63342 - 64931 971 529 aa, chain - ## HITS:1 COG:TM0068 KEGG:ns NR:ns ## COG: TM0068 COG0246 # Protein_GI_number: 15642843 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol-1-phosphate/altronate dehydrogenases # Organism: Thermotoga maritima # 17 526 18 532 539 437 46.0 1e-122 MKLDLDALHGPALADAGLALPLFDVGEMRSQAHDRPRWMHIGPGNLFRVHIARLAQDIMN SGAEQCGIAAIAPRNPQRLDRGLTDHDLLTLGVTSHADGHTDFGVIASISEGLAYRRDDD FRRITEIACAESLQLITLTITEKGYQLNGYDGSYQDAVVEDLGRDPESDRMSTAMGLVTA LLVRRFHAGATPVAVVSCDNFSHNGDMLRTSVLTIAAEWEKRGVIDHRVVEWIAEKVEFP ISVIDKITPAPSQKVAEQLAAMGLEDMGIDPDVEVAGFVNTEPAEYLVIEDRFPNGRPEL EKAGVYFTDRDTCYRFERMKVTTCLNPLHTALAITGVLLRKPTIDEAMKDPGLAGLVHCL GWQEGLPVVSDPGIIDPKEFLREVEEERFPNPFLGDTPSRIATDTSQKIPIRFGETVKSY LADDSLKVASLRAIPFVFAAWCRYLMGIADDGEPVELSSDPLLGQLESVVSGVRFGDDDS KVISPILSRGDIFGVDLTMTPLSDVVERFFIRLTAGPGAVRSVLDEEFA >gi|302034478|gb|GL383157.1| GENE 63 64947 - 66359 806 470 aa, chain - ## HITS:1 COG:SMb21354 KEGG:ns NR:ns ## COG: SMb21354 COG1904 # Protein_GI_number: 16264678 # Func_class: G Carbohydrate transport and metabolism # Function: Glucuronate isomerase # Organism: Sinorhizobium meliloti # 8 459 5 458 469 370 44.0 1e-102 MSTPTLTLSEDRLLPRESSALAAAREIYRSTKGLPIISPHGHVPVSWIADDMAFSDPTSL LITPDHYVNRLLHANGVDLEDLGVGRKTMSEEDNRRAFRILCEHWRDFAGTAMRYWLVDQ LVGIFGITERPSPENADRIYDTIAERIAQPDFLPRALMDSFDIAFIATTDDPCDDLDGHA RLAADETFTRRVAPTFRPDKYLEPAAGGWTGLLARLSEVSGCDATTLDGFTEAMEDRRAY FRQHGAVSSDHSHRDLGTIILDHDRAASIFDASVAGRATVEEMALLRRHLFTDQARMASE DGLTMTVHPAVHRNHDTAAFHRFGADIGSDVPVTLEVVDSLHPLLDKFGNTDLKLVVFTI DETLYSREIAPLSGWYRSLYIGAPWWFIDAPESVMRFKHAVTEMAGFSRVSGMIDDTRAF CSIPARHDMSRRLDAAHLAELVVLGRLDLDEAVEIAHRLVVEQPTQVFGL >gi|302034478|gb|GL383157.1| GENE 64 66424 - 67431 618 335 aa, chain - ## HITS:1 COG:TM1200 KEGG:ns NR:ns ## COG: TM1200 COG1609 # Protein_GI_number: 15643956 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Thermotoga maritima # 11 335 6 333 333 145 30.0 2e-34 MGVGEESTAPVTISDVARAAGVAPSTVSRAFSRPGRVSVKTSERIFQAARKLGYRQDEVP RVSTSRTYHLVAVCVADVMNPVFGATVKGIFAGARKRGYMVVLIDSNESSEIESETTKRS LATVDGFIFVGSRMSDAGLRHLAGIKPVMTVNRKVPGVSSVTPASDEGLGDALTHLVSEG RSTVTYLAGPTASWQSGVRWRSLLERARRDGKVTVHQLACPTPTIRGGIEAFDMWRAHPT SAVIAYNDLIAIGFMRRAMACGLRIPNDVAVIGFDDIPFSALVSPALSTVRVNQFQMGVV AVNRLLDMVEKPSHHERQAPSEDVVPVSFMVRESG >gi|302034478|gb|GL383157.1| GENE 65 67608 - 69032 1322 474 aa, chain + ## HITS:1 COG:BS_yjmB KEGG:ns NR:ns ## COG: BS_yjmB COG2211 # Protein_GI_number: 16078296 # Func_class: G Carbohydrate transport and metabolism # Function: Na+/melibiose symporter and related transporters # Organism: Bacillus subtilis # 17 448 16 439 459 189 31.0 1e-47 MSTITTKGQKAKAVNARDFDIRDMIGYALGDVGNNFTFNLVNSFLMIFYTNVFGLAAALV GALFMAARLVDAFVDIMVGRLIDNSKMTKRGRFTPWVMRMKFPLAASAILLFLPAAGHLP MTTRVVYAFVTYLAWGIFYSFVNIPYGSMASAISGKPRDKTSLSTARSIGSASGAAIVSY VVPLIMYGSNSHQINPHRFFTGAAIFAVLGLFCYIGLTMLTVERIRIDKTERVPLGKMFS EMAHNKALVMLVLIDIVVVINQNLSGITLTYLFNDYFQNKTAMSIALVFNFTTVILVAPF AQTLVRNFGRKESAAVALFFGAAMYGLMLIIHTHSPWIFLVDLFFGSLGAGVFNLMVWAF ITDVIDAQEVMSGEREDGVIYGVNSFARKLAQAIAGGIGGAMLTMIGYQSSSQGGAVQSE SVVNHLYTLATAIPTICCLGAALLMLGYPLTRDKVVANADELARRHAVQAEQNS >gi|302034478|gb|GL383157.1| GENE 66 69052 - 71544 1578 830 aa, chain + ## HITS:1 COG:YPO0848 KEGG:ns NR:ns ## COG: YPO0848 COG1501 # Protein_GI_number: 16121156 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-glucosidases, family 31 of glycosyl hydrolases # Organism: Yersinia pestis # 129 823 86 778 792 741 51.0 0 MDTLMRITDHLTTSPGIQLKIDKRWGASVTFVTRSIAHVRIFDAADPQLDRTWSISLGSN ATPRTGLGPRDLLDHSPAPAWAGNSRDVAPVEDMEVTTTVTASAEDTASHPEFSGVYADE PVDSPDPDEKSFIVGTDSLRVIIRDCPLRMTWQRRADDWVTVSEDRPTGAYEIGTHTGRV AHHRVRNIDDRYYGLGEKSGDLERTGRIFDMRCLDALGYDAGSTDPLYKHVPFLMTRTAN GAFGIFYDNLSASRFNLGAEVDNYHRPFTSWQADHGDIDYWVMTADHLCDLTPQILRLTG NPAFLPRWALGYSGSTMHYTDAPDASCQLLKFIDLLREHAIPCDSFQLSSGYTTIGSRRY VFTWDRDKFSQPTDTTRHFRDAGLHLAANIKPALLTTHPYYRDVAEAGIFVTNSRTGEPA TSMFWGGHGGNVDFTNPRGVQWWKDNVRHQLIDMGIESTWNDNNEYELWSEDAICDGFGH PVELDRIRPVQALLMSRASFEAQREAAPVERPFLISRSGPLGLQRYVQTWSGDNSTSWRT LKYNTRMGVGMSMSGLVNFGHDVGGFAGTARPGPELFARWVANGVMHPRFTIHSWHNDGS VNEPWMYPEITDIVREMIRLRYRLIPFLYTLSYLAAERREPIVNPVFSLDDTLHEESDDF LLGHDLLVASVVEKGQTTRTVTLPHVSDGWFEFDTGVHHDPGTVTLEAPLDRLPLLVRAG AGIPQCELPAPSGEIITTRTVENSPHRIVLYLPDGNGHSQGFFFDDDGHTNGYRQGHGYW LTWSADHTDTTVIVHTHVEGDYQPSWGTMAFALRPGDDRAIKVVADAAQD >gi|302034478|gb|GL383157.1| GENE 67 71577 - 73358 1208 593 aa, chain + ## HITS:1 COG:uidA KEGG:ns NR:ns ## COG: uidA COG3250 # Protein_GI_number: 16129575 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase/beta-glucuronidase # Organism: Escherichia coli K12 # 1 591 1 591 603 594 49.0 1e-169 MLRPQDTATRDTKCLSGMWDFAFDAEDRGQTEKWFTRPLPTCTEMAVPASYQDLSTDPAA RDHVGPVWYQREVRIPRGWTDDRVVVHFESATHAATVWVNDVEVVRHVGGYLPFEADITD HVCAGKKCRLTVRVDNRLSFQTIPPGIIVDSPEGPKQKYWHDFFNYAGIHRDVWLCRRPQ AHIEDVTITTDIDGNDGIVTWSVLLHDAEPLTTRVTIFDTEGNVVAGGTSANAHARIPSV HLWQPGHGYLYEAEISLVDGDQVIDTYQQVFGVRTIRVDGARLLVNGEPVHLTGFGMHED HQTIGKAHNDALMLRDAACLEWIGANSLRTSHYPYSERILDYADRHGLLVIDETPAVGIN MGLGGGIFGAQGYPTFSAETINDKTQKVHAQVIRDLIARDKNHPSVIIWSIANEPESETE AAENYFLPLFDVARAADPTRPVSFVNVMLAPFGKCRVSQYSDVLLLNRYYGWYVDTGDLA AAERHWREEMAGWASENKPIIITEYGADTMPGLHQIPAQPWSEEYQVEVLKMNERVFDSF DAIVGEHIWNFADFATTSGTMRVGGNRKGIFTRDRQPKSAAFHLRKRWRGVAQ >gi|302034478|gb|GL383157.1| GENE 68 73462 - 76863 2760 1133 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5414 NR:ns ## KEGG: HMPREF0675_5414 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 1133 1 1133 1133 2319 100.0 0 MAGTIGSMVTQAHMDSVNLRLALNGLPLPTAARASYIDVVAPVLARQRELRRELPELLCP ADRRIQAFIDRYLGEDSSVHPRLPDTTLTLDEPGLARALSLPVDGDDFSSDLVSSYRVAN GVLHNPRNDRRTTAGVFHVAEGGLAIPDDKKAVPIDVFARLLDLAFQAPPEHTLLPYTST QPVDRQAHTWVSLLLRPLVVPEVPGFVSERRMEIRFFAPGGLVSNLDFVEGIFGNSGDPL LPVNDSALAPSGWTGHSGCIILAPHLNLIRKVDLGLPHVDQATDRQRRDGMCWSDESELY NEGKPFKLCARDESGVILTIVADNYFGYCKKEVKTQISYSANLFGLAEEEHSGGARAYIS HNEGQEYATPVCDQTVSDVVMANPDHFEMLSDGQARVLDIDDVVLVPGGTKFSLRDGTVS WDNGDHSIRMRADTEYISPAGYRIHMVHNDADDQWYLEGTYGDSTTLHKCCTVSGGGKSE ISKAISDTFLWGNAYSPDFEADMDAVDDILHRDYSTRFADPKLNGIDHRPVLSTERSVGS VIKLLTPSSDFTDWYNDWINSIPAFRKELVFTIKRYYKPEWGDDWRSHFSVAPTNGRHGN MVRLDGQKVLVSMARVGFQPDGSWRLFTLRHDYAPAVKVQTEDDMTASIVTSPGVVTGPE GLSRKVVANCEALLFQRPDDAIYRGYDTQTERDMSGTDLFISNYQPLTREDVRAMRDDVV AFSKFTPPMRTFLSNFADSDPSEQPKFVVSSADPRLIDGVRSRNPRYLQVRPDIAKPRET AIANLASHLYHGLPIDEPLPLPVDVVAAGRRNNPPEGKIPALCAYNPLHYMELPELFMEF ISSMTGKSPSTTGAGSEGALTKAPFNALPAVFDLNSSFLSFVLSGYDGWLSSAGFIGPKV EVAHDISLLVPEIFCRMSPAERDAKTLIEGGYLEKLEDYDKDGELILASRLGYRMTEKFM RAYFGRIFLHPDTVFTPEMLRPELQDADIFADSVRTISTTHARVAKAYFDDGTVSLAVPP IRALLEIMVNGVCSEGWTLDDPELREMFTRESVLASDWYAERIDAKQAEAVRRAERGIAH LEQFMADPRNASACEEIDVQARLDQVRKFHDRAVTAEYRQQLVGTLGRQVNFR >gi|302034478|gb|GL383157.1| GENE 69 77076 - 77321 98 81 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MARLSLMALGQESLVGMVDTADEGFGSDELNRRKPGTSGEIARPVIFDTDPLVETGCSEI NDVHTPIVLPLMLLRESSDKG >gi|302034478|gb|GL383157.1| GENE 70 77357 - 77686 107 109 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAAWRKSGRQRVTMMTEVLTAEARLSQATILLNPAAMKARVISSTAEPVIFAGPGCQATD TGTGARGTSRNQRSASLGKSTSLPRVRAATTGTTNLATIPSWVADSATR >gi|302034478|gb|GL383157.1| GENE 71 77777 - 78016 217 79 aa, chain - ## HITS:1 COG:no KEGG:PPA2336 NR:ns ## KEGG: PPA2336 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 79 150 228 228 145 98.0 4e-34 MSAGAIRRMRLDLRRSVKTEESWIERWFGWLRGNGLVPADVGRLRWPMSLARHDYDAPAT VVQTSAQSPQQAMREPLTW >gi|302034478|gb|GL383157.1| GENE 72 78658 - 80004 877 448 aa, chain + ## HITS:1 COG:PH0207 KEGG:ns NR:ns ## COG: PH0207 COG1167 # Protein_GI_number: 14590140 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Pyrococcus horikoshii # 3 424 5 427 428 328 36.0 1e-89 MRVKAAVAAHEAADAATDRRVDTTFDKFHDRYSTRSLGLKTSPVRALFAVANRPEVVSLA GGMPNIADLPLDVVSESLKELVDTRGTVVMQYGSGQGEPEMRKHICEVMAVEGLVADPDD VTVTCGSQQGLDLVTRIFCNPSDVIMAESPAYVGALNTFASYQTEVIHVDMDDSGLVPES LREKVTAARQDGKSVKFLYTVPNYSNPSGISQSTERRREILAVADELDLLVVEDNPYGLL NLDGDPLPTLKSMDPDNVVYLGSFSKTFAPGFRIGWVLSPSFVRDKLVLAQESATLCPPV FSQFAVSSYLAHWDWRAQVDSFINMYRIRRDTMLASLAETMPEGTTWSHPSGGFFVWLTM PGAIDSAAMLPRAVTKFVAYTPGTAFYADGRGQRNIRLSFCYPTPERIKVGVERLAGVMR EELEIAETFGLADERRHSRDLGPGPNLA >gi|302034478|gb|GL383157.1| GENE 73 80299 - 81282 657 327 aa, chain + ## HITS:1 COG:aq_521 KEGG:ns NR:ns ## COG: aq_521 COG1181 # Protein_GI_number: 15605989 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanine-D-alanine ligase and related ATP-grasp enzymes # Organism: Aquifex aeolicus # 17 319 3 290 291 174 35.0 1e-43 MPSLSWHWLNGGMLQPVVVLAGGLSHQRDISLKSGRTVAQALRRVGHEVVEADIDSALIE TLRANDGAVVFPMLHGGLGENGALLEVLQLMGIPYVGSSPATCRISFDKSIASRAVAAAG IVTPQQVALPHDVFRELGAQTVMRSIAEKFGLPVIVKPARGGSSLGVTKVDGVDDLPQAV ANAYAYDDMVVVEEFIVGTELAIGMITTSEGTRVLPAVEIRPVGGVYDYSAMYTGGETRL TAPADISDTAAQTATAMARVVQKELDFSGISRVDAIVDESGRPVFLEAGAAPGMTATSLV PVAMKAAGLDLGEVCSRLVDDVARNHG >gi|302034478|gb|GL383157.1| GENE 74 81275 - 81991 308 238 aa, chain + ## HITS:1 COG:no KEGG:PPA2339 NR:ns ## KEGG: PPA2339 # Name: not_defined # Def: membrane-associated protein # Organism: P.acnes # Pathway: not_defined # 1 238 7 244 244 430 99.0 1e-119 MADSVHMKGSRHAVRVKQASVVLLGVVLASVMVFLGLWQMNVFESQRDDSTQARINGPVI TWNEAPKKADVMAQYGRRVTVTGTFQRSTTTLIGTSWPVRVVTGIKLTSGETMAIVRGKL SKGERVPAAPTGVITVTGVLAASEADDGRRNSQMPAAVLPSLRLEVLTQTWPQPLVPATL TLDKKNALAQGLAPAQPVLPKGDGGERNRGYALQWWVFAIFTVAMSLAFARAAGKHKE >gi|302034478|gb|GL383157.1| GENE 75 82003 - 82560 410 185 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5419 NR:ns ## KEGG: HMPREF0675_5419 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 185 1 185 185 361 100.0 1e-98 MQRQLTCFSTLFHVKHSDDVTSDDFYMTPDNISDDTRAGDAAHDHSTDSRHSETTAETET EPWIEPDDISGVRKALLCYRVMAYIVGTLLIVLVCVAMPLKYAAGRPTMVNVVGISHGWL YPVLLITAYLLGRKAGWPLTRLLIIALAGTIPFLSFVAEYFARKDVNCRIDDAKDYWAHH GAPTE >gi|302034478|gb|GL383157.1| GENE 76 82818 - 83738 603 306 aa, chain - ## HITS:1 COG:ML2706 KEGG:ns NR:ns ## COG: ML2706 COG1475 # Protein_GI_number: 15828464 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Mycobacterium leprae # 4 305 9 331 335 236 44.0 4e-62 MAAKHSGLGRGFGELFQRTDLDDDDEERVDDASTDGDAINERVGGSRLELISVDEISPNA RQPRKMFNEEELTELSESIRAVGVLQPVVVTPADNGYELVMGERRWRAARKAGLATVPAI VRTTASEDMLRDALLENLHRVQLNPLEEAAAYEQMLNDFGCTQDELSEKIQRSRSQIANT IRLLKLSADVQKRLLDGEITAGHARCLLAIDNPEVQVGTANRVVDEGLSVRATEELVRQT LDDTTEVKPHQRKKPGRDTEAVKLGEQLSQRFRTAVKVRRRNGRGTITFPFNDNEELERL IDIFSD >gi|302034478|gb|GL383157.1| GENE 77 83741 - 84727 207 328 aa, chain - ## HITS:1 COG:Cgl3035 KEGG:ns NR:ns ## COG: Cgl3035 COG1192 # Protein_GI_number: 19554285 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Corynebacterium glutamicum # 43 304 27 289 307 289 54.0 6e-78 MTNEVPIYDGAPKRAAFDSPDVLEVAESSADSIDGPAAPTVPLTLPRPASPRTVVVANQK GGVGKTTTAINFAVALAMSGLKVLVIDTDPQGNASTALGIDHEAGTPGTYEVLLDEEDIG LVAKPSPEAPGLEVVPATIDLSGAELQLVDVKGRERRLRKALRKYLKNHDVDYVILDCPP SLGLLTLNALVAADEVLLPIQCEYYALEGVTQLMRTIEAVRHAMNKELRLGSILMTMFDG RTRLSTQVDEEVRTHFARETMSTRIPRSVRVSEAPSYSRSVLTYEPTSAGAVAYREAAAE FAKRHACDEHSTNTSGVKHPDASDTKKG >gi|302034478|gb|GL383157.1| GENE 78 85932 - 86297 70 121 aa, chain + ## HITS:1 COG:no KEGG:PPA2371 NR:ns ## KEGG: PPA2371 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 121 1 121 121 192 98.0 4e-48 MSCCSFAQASTDDASVACHPAQFLDIVKLLSRSAELARRTTLFHVKHHILLRAVCHPSAM PSTSVRTHMIGTDARPSSPKLTHTAGVATITCRHPCWCPARVLMVAAPLAGTSTHKQRLQ H >gi|302034478|gb|GL383157.1| GENE 79 86294 - 86524 67 76 aa, chain + ## HITS:1 COG:no KEGG:PPA2343 NR:ns ## KEGG: PPA2343 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 76 1 76 76 122 98.0 3e-27 MTSSITNAGANIRLIDRYHQRVHQVSALQTSMHLALDTTPGRYSCSTCVDAASVTYFDDM LQAPSGTITETMMQAI >gi|302034478|gb|GL383157.1| GENE 80 86554 - 87180 441 208 aa, chain - ## HITS:1 COG:ML2708 KEGG:ns NR:ns ## COG: ML2708 COG0357 # Protein_GI_number: 15828466 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division # Organism: Mycobacterium leprae # 22 178 44 203 248 147 50.0 2e-35 MTLVSDDAIADRLYRDNYKTIRQYVDILVSRGVDWGLIGPREIGRLWERHILNSIALESL IPEGCRVADVGSGAGLPGIPLAILRPDLEMTLIEPMLRRSNFLTEALDELGLDDRVTVVR GRAEDADLHVDVVVSRAVAKLATLINWTADLIVESGSLLALKGQSADDEVVKAKKELSKR RLSAEVLLIRADPAADVTRAVRVRRAGK >gi|302034478|gb|GL383157.1| GENE 81 87477 - 87689 87 70 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313771078|gb|EFS37044.1| ## NR: gi|313771078|gb|EFS37044.1| hypothetical protein HMPREF9574_02595 [Propionibacterium acnes HL074PA1] hypothetical protein HMPREF9585_00244 [Propionibacterium acnes HL083PA1] hypothetical protein HMPREF9593_02006 [Propionibacterium acnes HL046PA2] hypothetical protein HMPREF9597_00501 [Propionibacterium acnes HL005PA4] hypothetical protein HMPREF9595_01573 [Propionibacterium acnes HL005PA2] hypothetical protein HMPREF9583_00868 [Propionibacterium acnes HL038PA1] hypothetical protein HMPREF9337_00168 [Propionibacterium acnes HL096PA3] hypothetical protein HMPREF9584_00625 [Propionibacterium acnes HL092PA1] # 1 70 1 70 70 110 100.0 4e-23 MLTFPRPTNAGIALPTHQSIHNNQNAERSFPELSTVITTASIWKFKSAEHQPHESSAEHR RPSNMSVILR >gi|302034478|gb|GL383157.1| GENE 82 87626 - 87826 115 66 aa, chain - ## HITS:1 COG:no KEGG:PPA2345 NR:ns ## KEGG: PPA2345 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 66 1 66 66 130 100.0 2e-29 MASQGWRGYREIANQVTPGATPDQTSTDHANGLLSFVVDSDVLLHAYLKMTDMLDGRRCS ALDSCG >gi|302034478|gb|GL383157.1| GENE 83 88499 - 88936 65 145 aa, chain + ## HITS:1 COG:no KEGG:PPA2372 NR:ns ## KEGG: PPA2372 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 145 3 147 147 249 99.0 2e-65 MILNGTPSYALTSHTSFDVTGIQQLPRHEQSLSRRRYHVRYHVAALTQRASSTISNVNST CVHTGFRQLYPPPPAQKFTATDIPSLRNNLITDPSHHVPTCFRPCQTELSHDPVSPNFTF HVKHIFIDFSFCRHIVQYLYPPVQP >gi|302034478|gb|GL383157.1| GENE 84 89166 - 90194 682 342 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5425 NR:ns ## KEGG: HMPREF0675_5425 # Name: not_defined # Def: alanine racemase, N-terminal domain protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 342 1 342 342 681 100.0 0 MLKLTIDAQRWRNHLTAFAKSCPGIVPVTKGNGYGFGHELLVQESQRLGIDILAVGVAQE VASVRQYGWDKDVIVLNPWRPGDEVAAGLLNDPKVITTISRREDIAALRDLAPSASILVE VETSMHRHGVPADEVAALDLDGFDLRGWTIHLPSGASLDEGREMARIVKQHPLASRGIWF SHLSCDDYIALSKKLDVPVRMRVGTRLWLGDANAYRVTGTVLDVRWLPKRTPVGYHRVKT HADGYIVVVSGGTAHGVALSAPISARSLRQWLIPGAEALQQMVGRVISPFTIAGKKAVFA EPPHMHSSLVFVGGPGEPTHVGDEVPVNVRMTTATFDEISLV >gi|302034478|gb|GL383157.1| GENE 85 90196 - 91323 966 375 aa, chain - ## HITS:1 COG:SA2057 KEGG:ns NR:ns ## COG: SA2057 COG2348 # Protein_GI_number: 15927842 # Func_class: V Defense mechanisms # Function: Uncharacterized protein involved in methicillin resistance # Organism: Staphylococcus aureus N315 # 16 266 14 232 421 88 26.0 2e-17 MPISARSISVSTMLEFIAARGSASFLQTPAWARVKSEWRGERVGFYDGDELTGVGLILYR KLPKLPRYLAYLPEGPVLDWSRDDIAEHFDALVTHVKKRQAFAVRIGPAVVHRIWGTKTI KTAIADDNITSLTEVEPDIVTPEGEHVVSVLKQGGWITDETGHGFAAGQPQFNFQLSLRH EDGTQKSEDELLKGMNQLWRRNIKKAAKFGVEVKLGTRDDLARFHKVYLETAERDGFTGR PLEYFEHMWDVLNAEEEGRMKVFLAEHEGDVVAATTFVTVGEHAWYSYGASTTAKREVRG SNAIQWAMIRTANEARCAVYDMRGIVAGVGANDPEIGLIQFKVGSGGQAVAIPGEWDKPI NPILYKAFDLYMKRR >gi|302034478|gb|GL383157.1| GENE 86 91533 - 92144 603 203 aa, chain - ## HITS:1 COG:MT4039 KEGG:ns NR:ns ## COG: MT4039 COG1847 # Protein_GI_number: 15843554 # Func_class: R General function prediction only # Function: Predicted RNA-binding protein # Organism: Mycobacterium tuberculosis CDC1551 # 38 202 22 187 187 113 57.0 3e-25 MSESSERSEELDVDQVEDCCNLDPEEIEADDVESEDSDDNDSDGAENDDEETGDPLDEEG DIAADYLEELLDIADLDGDIDTYVESGRAHVSIVTDSQTLVGKDGKVLEALQELSRLAVM TEVGHRSRLMLDIAGYRESRRKDLVVLATEAIQSVKETGEPAHLAPMNPFERKIVHDAVA AAGLVSESEGVEPKRHVVITQEQ >gi|302034478|gb|GL383157.1| GENE 87 92197 - 93276 1075 359 aa, chain - ## HITS:1 COG:HI1001 KEGG:ns NR:ns ## COG: HI1001 COG0706 # Protein_GI_number: 16272937 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YidC # Organism: Haemophilus influenzae # 21 267 332 529 541 144 36.0 2e-34 MLNPLVILSLGGALHTMGHAIMVPLYWAVSGLLVLFHYLWSPLFGRDSGISWTLAIVCLT IFIRLLLVPLFVKQINSARSMQLIQPKMKAIQEKYGDDRERAGQEMMNLYREEGVNPAAS CLPVLLQMPIFLALFRVLDGASRGIPRGHFFAKNPGLMESLQHAKFFGAELAGRFLPMNN GFGGTQVVALVLIIIMVATLFYTQLQLMRKNMPPESLTGPMAQQQKMMIYLFPLMYLFSG VSFPIGVMLYWCTSNLWTLGQQEILIRNNPTPNTPAYIDWRERMIAKGKDPDEIERARRE KRRRKVVAPTPVATIEDSEKPMVARQGVTRQTVRKDASGGRQVVRRQQPAKQTRAQRKK >gi|302034478|gb|GL383157.1| GENE 88 93276 - 93752 206 158 aa, chain - ## HITS:1 COG:VC0005 KEGG:ns NR:ns ## COG: VC0005 COG0759 # Protein_GI_number: 15640037 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Vibrio cholerae # 26 105 7 84 85 75 45.0 3e-14 MIAAAIPSRHPNDDGGVWATVRRFRPLTWLAIGFVKGWRALISPLYGDVCKYQPSCSTYG LRALQVHGVFRATPMIIWRILRCNPWSHGGYDPVPGTPEARQWRELHPETARSKNEPIHD LTDDNPRDHEPALRKSIPGYTDPGSTHTGTPSHTRGEN >gi|302034478|gb|GL383157.1| GENE 89 93749 - 94195 148 148 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5431 NR:ns ## KEGG: HMPREF0675_5431 # Name: rnpA # Def: ribonuclease P protein component (EC:3.1.26.5) # Organism: P.acnes_SK137 # Pathway: not_defined # 1 148 1 148 148 258 100.0 4e-68 MLPARSRMHRPGDYRAAVRGGVRSGRPTLVVHAGRHAQFRFDSADKTELSTAPVGNCGSG EPLVSTTTSRSDLDVTPRVGFVVSKTVGNAVTRNRVKRRLRHLCRPLVDELEDGTVVVVR ALPAAATQPDRVAKDLDGAWHQALRKLR >gi|302034478|gb|GL383157.1| GENE 90 94202 - 94336 215 44 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|50843793|ref|YP_057020.1| 50S ribosomal protein L34 [Propionibacterium acnes KPA171202] # 1 44 1 44 44 87 97 1e-15 MKRTFQPSNRRRARNHGFRSRMSTRAGRSILAARRRKGRVNLSA >gi|302034478|gb|GL383157.1| GENE 91 94696 - 96198 1687 500 aa, chain + ## HITS:1 COG:ML0001 KEGG:ns NR:ns ## COG: ML0001 COG0593 # Protein_GI_number: 15826866 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication initiation # Organism: Mycobacterium leprae # 34 499 44 517 521 434 51.0 1e-121 MSDTPFGDADHPRPAPIHPDAVLPPPMSSQSADNDPTEALNEAWTNILTKVSKPNRAWLS NTTPVTMHSSTAMVAVPNEFARDRLESKMRYELEELLSDHFHKAIHLAITIDPDLELALG APDHEDEEEEVPPAQFVPKVTVGVTKPSARPTTTIDDDEGNRLNPKYTFDSFVIGASNRF AHAAAVAVAEAPGKSYNPLLIYGGSGLGKTHLLHAIGRYVMSYYDNVKVKYVSTEELTND FINAIGTNRTTEFRRSYRDVDVLLVDDIQFLQSKIQTQEEFFHTFNTLHNAQKQIVMTSD RPPKLLEALEPRLRSRFEWGLLTDIQPPDLETRIAILRRKVAAEKITVEPDVLEFIASRI QTNIRELEGALIRVTAFASLNQQPVDISLAEVVLKDLIPEGRETPVTPERIIAETADYFD ISADDLLGTSRAQTLVTARQIAMYLCRELTDLSLPKIGAEFGGKDHTTVMHADRKIRALM GEQRQIFNQVSEITNRIKQY >gi|302034478|gb|GL383157.1| GENE 92 96243 - 96482 69 79 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRDGDVCLFFVLVTPVELVDNCQTPLSATFCGSGRRRGLDVRAGGVAVDIGSCPTVIPWL STGFPHMGVGIGVTGRACA >gi|302034478|gb|GL383157.1| GENE 93 96493 - 97830 1069 445 aa, chain + ## HITS:1 COG:MT0002 KEGG:ns NR:ns ## COG: MT0002 COG0592 # Protein_GI_number: 15839374 # Func_class: L Replication, recombination and repair # Function: DNA polymerase sliding clamp subunit (PCNA homolog) # Organism: Mycobacterium tuberculosis CDC1551 # 63 444 16 401 402 287 43.0 2e-77 MWIWGQGLAAAHRSNTGRRSTTKRTLDVDITMGVPTVGKHGYDQHAGTMECETPNQGDAV EIRLERDVMAEAVAWAARSLPNRPTVPILAGLLVRAEGDSVVMSASDNETSAQITLSAQV DEPGESLVSGKLLADIARSLPNKPVQITTDPAKMDLVCGSARFTLQALPVDEYPDLPQMP AATGTVDASVFSRAVAQVVVAAGRDELLPVFTGVRVEINGETLSLLATDRYRMALKEITW NPSATDAEATALVPAKVINETARSMTSGEHVTMNLSSGDSGEGLVGFEGDGANGVRRMTT RLLSGEFPKVRHLMDIKATRSVRARTDELINSVRRVSLVAERNTPLRMVINDDSVALSAA TGDQAQASEAIEAVVTNHVDGEPTITAAGFNPHYLSDALGALDTPYVHFSFTAPGKPCLV TGLNDFDGKPETDYRHVIMLMRLPS >gi|302034478|gb|GL383157.1| GENE 94 97967 - 98620 235 217 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3002 NR:ns ## KEGG: HMPREF0675_3002 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 217 1 217 217 422 100.0 1e-117 MTTIADVRTGVNRVFDALGAPSWSNPHADHSVAAEEEYSRVTDPERYHVLMLRLQAWQTV LAKLCDVDVDTMAKGRGRLQQRWSSPHSDTLPLYVSVVTFDQVPFVGLSATSDADPFDII PDCACDACDHGSEDLLRVLDADLAAVVDGSLVVVTGPVVNGEPTFHLVGTGQGCASTWGG DEVGPLAEPEAVIDAIRSGDDPLLPPGCTVLHGRPWL >gi|302034478|gb|GL383157.1| GENE 95 98678 - 99862 670 394 aa, chain + ## HITS:1 COG:Cgl0003 KEGG:ns NR:ns ## COG: Cgl0003 COG1195 # Protein_GI_number: 19551253 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair ATPase (RecF pathway) # Organism: Corynebacterium glutamicum # 1 374 1 368 394 315 46.0 1e-85 MFVERLELVDFRSYVRADVPMAAGATTFIGSNGQGKTNLVEAVEYLSTLSSHRVSNDTPL VRLGADQAVVRGRVRAGTDDARSLLLEVEINARRANRARINRAPLTRPRDILGVLRTVVF SPNDLAVVRGDPSDRRAFLDGLVVTRWPRMAAVKSDYARVLKQRNALLKSLSGKGRSAGA EIGATMDIWDNELATIGAELLSARLDTLSAVMPLTSAAYREIAPVNDLTTASYKSTIDLE GLWSPPQERESSTPIDRKELANRFLDTLAKRRADELIRGVTLVGPQRDDIILHIGEMPAK GYASHGESWSLALALRLGSFQLLRDDGIEPVLVLDDVFAELDATRRDRLASSVVQADQVL VTAAVASDVPEILRGERFDVGGGQVLAYEGNNDD >gi|302034478|gb|GL383157.1| GENE 96 99855 - 100448 231 197 aa, chain + ## HITS:1 COG:ML0004 KEGG:ns NR:ns ## COG: ML0004 COG5512 # Protein_GI_number: 15826869 # Func_class: R General function prediction only # Function: Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives # Organism: Mycobacterium leprae # 49 197 48 189 189 113 43.0 2e-25 MTDGLDEGPTEEDRRLAADHDDEGVDVALAIARAARGEPAGTPRHDDDGEVLLPPPRRSA ARKRRRRPSTPSWSGPKADGRDPMALGDAFTHLVQSKGWGRQVNLHLVLSRWPELVGPTN AEHSRPVKYQGTVLTVRTEATVWATSLRTIAPQLVAELNRRLGEGTVTRVVIEGPSAPSW KHGPRSVPGRGPRDTYG >gi|302034478|gb|GL383157.1| GENE 97 100512 - 101078 179 188 aa, chain - ## HITS:1 COG:BH1126 KEGG:ns NR:ns ## COG: BH1126 COG1132 # Protein_GI_number: 15613689 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Bacillus halodurans # 7 188 412 595 601 123 36.0 2e-28 MLGLLRPTIGDVRVNGISTRDLDLNQFYESVAYVSQDPPVFDGTIRENLLLQDTQDDKRA LEVLNTLGLGEFLERGRGLDSEVGERGSMVSGGERQQLAIARILIHPKPLIILDEATSAM DSISEERSMAVIQQVASDSILIIVSHKLKTLATADEIIVLESGQLTERGPLAELVNDDGV FNRLWERQ >gi|302034478|gb|GL383157.1| GENE 98 100939 - 101598 318 219 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3006 NR:ns ## KEGG: HMPREF0675_3006 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 219 159 377 377 413 99.0 1e-114 MDFRIALAVLLGYVVLLATTNLMLRRLYALKRNAVVDDELINRSISRIIMEFVSVRILGL GSRELAKTRRLCSENTNRSAKVVATHEFFFAFFALLIIIAKIATIVLFSFGKLSLSVGGL VALLLYMDRVYNPITILNVLYVQYKLDRVSLERLEQFLLLPNDEGLTGGGMPSDAGAFAT DHRRRSRQRYQHARSRPEPVLRICGVRIPGSTRIRWHNS >gi|302034478|gb|GL383157.1| GENE 99 101611 - 101961 325 116 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3006 NR:ns ## KEGG: HMPREF0675_3006 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 116 38 153 377 237 100.0 1e-61 MENLGLNRFQAVLDQVSHNHVSVMTVAVYGGLTVDACVIAYLDEIPKTKLRQGIYYHFKL EAMKKATLVDFSSAKSYGTGALLQRIEAGASAGRQMICDFWLRALREVLPDIIFGL >gi|302034478|gb|GL383157.1| GENE 100 102369 - 102596 91 75 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTTPIFDRCRSHLDQEDTSTEILHPRHPMRHSVHCQKPFATEVLGLTSYHLDTCDHNKAT STRLPQPLPRHSLGS >gi|302034478|gb|GL383157.1| GENE 101 102595 - 102804 78 69 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRKTVFFVGSLVTVSVLLIPLSTSRRRGSRGTHNRRDCPHLGDSSPTNVMKSNHACTDRT GPALRLGIR >gi|302034478|gb|GL383157.1| GENE 102 102755 - 103942 848 395 aa, chain + ## HITS:1 COG:ML0765 KEGG:ns NR:ns ## COG: ML0765 COG1482 # Protein_GI_number: 15827331 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannose isomerase # Organism: Mycobacterium leprae # 1 393 1 409 410 231 39.0 2e-60 MRALTGQVQHYDWGSADAIPAILGTRPDGTPWAEYWLGAHPKAPSALPDGTPLDQWLTHH PDELGAGSREAFGDRLPFLLKILSANHALSIQAHPSREQAEKGFAAENEAGVPLDAPNRI FRDDWPKPEMIVALTDFDALCGFRDPSSSLVLLSGLGEVDGLNEVLTPLSQNDGLATLVA AVLSGDDDVTPVVKRVVSASRAYLNDGADEDVRSLATTAVELWEDHPGDPSILVALLMNR VRLAPGQQIHLCAGSMHAYLGGTGVEIMANSDNVLRGGLTSKYIDVKALLDHANMTPEPC VGEYAQQISPGVGVYHTTFPEFRLWGLEGHNDVLDLPATELGRILLVTEGQLVAHCGTDD CELSRGQSVWLPAGDEVKVTGQGRGFLASAGVGDS >gi|302034478|gb|GL383157.1| GENE 103 103841 - 104041 86 66 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDVEGACERFDPLTRLPVPSGGSRRQQRYATFHSGVPYPSTCQESTSLTSHFHLVPGRQP DGLATA >gi|302034478|gb|GL383157.1| GENE 104 104184 - 106256 2120 690 aa, chain + ## HITS:1 COG:MT0005 KEGG:ns NR:ns ## COG: MT0005 COG0187 # Protein_GI_number: 15839377 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Mycobacterium tuberculosis CDC1551 # 43 690 23 686 686 745 57.0 0 MSQPEMPESVTDGDTPEDLLIDATDHPDGLDSELPPTAVDGSYDAGQITVLEGLEAVRKR PGMYIGSTGERGLHHCVYEIVDNSVDEAMAGYCDTIQVELLDDNWCQVTDNGRGIPVKEH PVEHIPTVTLVLTKLHAGGKFGNGGYKVSGGLHGVGSSVVNALAAHFIVEVRRDGYHWLQ SFSLGEPDGPLEQFEALGPDDHEGTTVRFQPSDEIFDAIVFDYQTLSNRFREMAFLNKGL RIVLTDRRADHADEDGNPVHEDFLYKEGLKDYVRFLTGTRDVINPTIISLESHRPEEGMG LEIAMQWNTSYATSVHTFANAINTIEGGAHEEGFRAALTNTVNRWGETWGLIKKREDRVS GDDIREGLTAVVSIKLTEPQFEGQTKTKLGNAEAKSFVQKALNEKLSDWFEENPNEGKSI VRKSQAAAQARVAARKARDLARNRKGLLGSTSLPGKLKDCSSTSPEECEIFIVEGDSAGG SASQGRDPRIQAILPLRGKILNVEKARLDRALGSETIESIINALGTGVHEDFDLDKLRYH KIILMADADVDGAHIRTLLLTLLFRFMRPVIDAGHVYLAQPPLFRLRWTNSPHELAYSDE ERDLLREDGLTHGKKLPQVNPIQRYKGLGEMDAEDLWDTTMDPDKRLLLQVTLEDAALAD QMFSILMGEDVEQRRSFIQRNAKDVRFLDI >gi|302034478|gb|GL383157.1| GENE 105 106298 - 108973 2413 891 aa, chain + ## HITS:1 COG:Cgl0012 KEGG:ns NR:ns ## COG: Cgl0012 COG0188 # Protein_GI_number: 19551262 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Corynebacterium glutamicum # 20 873 6 848 856 977 59.0 0 MADDEKPDEQNQADRQGLVTGRHVGIQPVEIRDEIQNAYLDYAMSVIVGRALPDVRDGLK PVHRRVIYAMYDGGYRPDRGWNKCSRVVGDVMGKYHPHGDSAIYDTLVRLAQPWAMRYKL VQGQGNFGSQGNDGAAAMRYTECKMAPLAMEMVRDIDQDTVDFQPNYDNKETEPVVLPSR FPNLLVNGSSGIAVGMATNIPTHNLREVNEAVQWSLAHPNASHEELLEACMERIKGPDFP GGALIVGRQGIEDAYRTGRGSVTMRAVIDMEEDKKGRQCLVVTELPYMCNPDNLATKIAD LVNSGRINGIADIRDDSSARTGQRLVIVLKRDAQPRVVMNNLYKHTALQDTFGCNMLALV DNVPRTLRLDQFISYWIDHQMEVIRRRTEYRLAQAEKDAHIQRALVKALDMLDEVIALIR RSPNTEAASTGLQELLDIDEIQARAILDMQLRRLAALERQKIIDRLEELERLIADYKAIL ASEDRQREIISTELAEIVDKYGDERRTRIIAADGDFSEEDFIPDDDVVVTITRGGYAKRT RTDLYRVQKRGGKGVRGASLRADDEVAQLFTTTNHQWILFFTNMGRVYRTKVWQLPEAGR DARGGHVAGLLSFLPDEKIAQVMTLRSYDGAEYLLLATRKGMVKKTALKAYDSSRQAGVI AVNFRTEDDELIGAEQCSAADDVLLISRKGQAIRFSAGDDQLRPMGRATSGVTGMKFRGD DELLSMSIIHSDMPEDDRFVFTATGGGYAKRTAVSEYRQQGRGGVGIKAMALSEERGSLV GGLVVSEADEIIAIKTSGQITRSAVSEVPAKGRSTMGVKFVSVRGGDAVSIIAVNPEHTV EEEVADESVETVEGDATQAQSGGVVRRSDTVDDDRAVDTAGNDMKPEDNGE >gi|302034478|gb|GL383157.1| GENE 106 108966 - 109598 522 210 aa, chain + ## HITS:1 COG:no KEGG:PPA0011 NR:ns ## KEGG: PPA0011 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 210 1 210 210 405 100.0 1e-112 MSDEKKVTHPGPDDPEAIHWTAGDARRTFHEKGEERPDPRQESDRKRTTASTPLRRTDSR GAQGEKAPNQQEPHRSPQAHQPARAPRRTRKARLRLTRVDPWSVMKTSLLFGVAGAVIFF IATWIIWGIIGASGAFDSMNKVVNDLISSPSSTSKFELSDYVNTGRVLGLTALIGAINAV LFTAISTLFSFLYNLAAQIMGGLEVTLAED >gi|302034478|gb|GL383157.1| GENE 107 109697 - 110665 837 322 aa, chain - ## HITS:1 COG:CAC3552 KEGG:ns NR:ns ## COG: CAC3552 COG0039 # Protein_GI_number: 15896788 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Clostridium acetobutylicum # 7 315 8 312 320 196 36.0 7e-50 MSIAPHLVVIGIGHVGSDVVTNAAALGLFSRISLIDVDKKVRDGQALDNHQATAVAPAMT TTITAANYDACRSADVIIVSAGPSVLPDSYGGGHDSRNSLAQVNSKVIREVMGNICQYTH SAPIILITNPLDVNVHIAATEFDYPTNLVVGTGTALDSARLRRHLADWAGVSPDSVQAFM LGEHGATAFPYLSHASIGGLTLAEATTALGLQPLSPDQVGNSVVQSAFDILEGKGWTSSG ISKAAVSLARAMLLDQRSIHPVCTLADGVLGFHSEVSLSLPTVVSGHGVEHHLNIVLDEW EQEKLLVSAKAVREVYESVRPA >gi|302034478|gb|GL383157.1| GENE 108 110938 - 111135 207 65 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313765011|gb|EFS36375.1| ## NR: gi|313765011|gb|EFS36375.1| hypothetical protein HMPREF9567_00650 [Propionibacterium acnes HL013PA1] hypothetical protein HMPREF9579_00509 [Propionibacterium acnes HL087PA1] # 1 65 7 71 71 129 100.0 5e-29 MSTLWKRFHECVIYTEPHSALSVKGVLQNPPHVPGYPCQSLINYVLIKAVAILHTTQGRA MRSGN >gi|302034478|gb|GL383157.1| GENE 109 111183 - 112190 704 335 aa, chain + ## HITS:1 COG:Cgl1222 KEGG:ns NR:ns ## COG: Cgl1222 COG1609 # Protein_GI_number: 19552472 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Corynebacterium glutamicum # 6 328 14 334 369 216 37.0 4e-56 MTHKPTIKDVARLAGVSLGTASRVLNGSSATSEASRSAVHNAAHELGYLSNAHARSLRSS HSGVIGLVVPDIRNPYFAELASVVENACLAYGWATLLCNADESPDQFNRYVNTLRRQRVD GAIVTPTGSGGQAVKDLVDDGVQVVCVDREITGSPLPAVTSDPWNGMRQAVHHLVDHGHR RIGFITGPQQTSTGLERYQAYRQLLAEHGLEVDEDLVVEGDFQEESGRMGARRLLDGGAT AIFASDSLMSMGALRTCIDQGVRIGDEIDLVGFDDLPVFSLTNPALTVVAQDIDAMGKVA VDLLNRAMSGEPTSSARLDTHLIVRASTRMVKENQ >gi|302034478|gb|GL383157.1| GENE 110 112187 - 113692 990 501 aa, chain + ## HITS:1 COG:Cgl1223 KEGG:ns NR:ns ## COG: Cgl1223 COG1129 # Protein_GI_number: 19552473 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, ATPase component # Organism: Corynebacterium glutamicum # 4 494 16 506 524 593 66.0 1e-169 MTTVLRLDHVTKAFGPVKVIQDVSVDVIPGRVRVLLGENGAGKTTLIKMMSGIYHPDSGS VVIDDTPVELPTVKAAEARGIATIHQELNLVPQMSVAENIMLGRTPSRGGLVNWGLMRAQ ARAALERIGLDVSPDRLVGSLSTAHQQLVEIARALSMDARVLILDEPTAALTRKESGQLF EVMDDLKTKGVAMVFISHHLDEIPRVGDDVSVLRDGTLVGEVPARTSERELVTMMVGRDI DDQFPRHRGEVGEVLLSVTGLSRERAFQDVGFDLHAGEVLGLAGLVGAGRTEVLRAIAGA DKYDSGTVRVRGKELPKGKISRAIVDGIGHVPEERKSQGLVLDASVNENLGYATMKSTSH AGLVDRSGQRRRAQNVAEKLRVRMASLDQPVRNLSGGNQQKVVIGRWILADSSILLLDEL TRGVDVGAKVEIYQLINAVTDAGGAVLMVSSELPEVIGMSDRILVMSHGRAMGILDAKAA TEDAVMELAVASVDPVDEKTG >gi|302034478|gb|GL383157.1| GENE 111 113775 - 114752 1020 325 aa, chain + ## HITS:1 COG:Cgl1224 KEGG:ns NR:ns ## COG: Cgl1224 COG1172 # Protein_GI_number: 19552474 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Corynebacterium glutamicum # 23 322 2 301 304 353 78.0 2e-97 MTTTSTATTQRPSVGRKVGSWSLNHGALVGLIILCIALFIATPVFLTVPNIINIGIQAAV VAIMAFGMTFVIVTSGIDLSVGSVAALSAMVSAWMFSNAGLPGWLTLIIGLLIGLLAGAV SGLAIAYGKLPAFIATLAMMSVARGLTLVISGGTPVATSDAVNQLGADVGPIPVPVIMLA LAGVVCWFMLSRTVLGRSLYAIGGNEEAARLSGIPVRRILVTVYALAGVFAGLAGLVLAG RLSSAQPQAGFGYELDAIAAVVIGGASLSGGSGKASGTFIGAVLLAVIRNGLNILNVTSF WQQVVIGCVIALAVGFDVFRSKKES >gi|302034478|gb|GL383157.1| GENE 112 114801 - 115742 994 313 aa, chain + ## HITS:1 COG:Cgl1225 KEGG:ns NR:ns ## COG: Cgl1225 COG1879 # Protein_GI_number: 19552475 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Corynebacterium glutamicum # 14 313 11 314 314 276 61.0 3e-74 MKFKSTKVLATAVAVTIIATGVAGCNRDGGAGSSASGTVVFAVSTQTNPFFVQLVDGAKK EAKAKGVNLQVQDASDDAATQANQLANAVSTSAKVVIVNPTDSDAVAPSVKALNKAKIPV ITVDRSSSSGDVASFIASDNIAGGIDAAKKLAEIMGDKGEVIHLQGTPGASASRDRGKGF SEEIAKHPGIKVVAKQTANFDRSKALDVTTNLMQAHSKATGIFAENDEMAIGAISALGSK AGQSAKVVGFDGTADGIKAVKAGTMGATIAQQPALLGKTAVDQAADILAGKQVSKTTPIK VVLVTKDNAKDYE >gi|302034478|gb|GL383157.1| GENE 113 115739 - 116668 665 309 aa, chain + ## HITS:1 COG:Cgl1331 KEGG:ns NR:ns ## COG: Cgl1331 COG0524 # Protein_GI_number: 19552581 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Corynebacterium glutamicum # 1 296 1 297 307 209 48.0 6e-54 MSGATAKVTVVGSINADMRVGVERFPGPGETLAGGEATLTPGGKGANQALAAARCGVQVA MVGAVGKDPTAETALSLLSEGVGLDGVVRRDVLTGTAVVMVADSGENSIIVIAAANGTVD AQTVRAQAERIQDADVVVCQGEIPPDGIAEAARGAKRFVFNLAPVVDVDPEVIRMADPLV VNEHEAALVALALGSTTSRLEDDPDAALRELLNLGCRSVVITLGSAGCIVGGPEGFDAVA AATVKAVDTVGAGDAFVGALAAELARGRTLVEGCRFATAVATLTVTKPGAQASYPSADEV ESIRRGEHA >gi|302034478|gb|GL383157.1| GENE 114 116665 - 117048 300 127 aa, chain + ## HITS:1 COG:Cgl1226 KEGG:ns NR:ns ## COG: Cgl1226 COG1869 # Protein_GI_number: 19552476 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type ribose transport system, auxiliary component # Organism: Corynebacterium glutamicum # 1 127 1 123 123 131 57.0 2e-31 MKKSGLLNPQLCAAVARLGHTQTFVVADAGLPIPHEVPVIDLAVVLGTPRFQEVFDAILD EVVVDGATIAHEALGHEPESWVRERIEEVRTVSHEDLKKALPNVSFVVRTGETTPYSNVI VRCGVPF >gi|302034478|gb|GL383157.1| GENE 115 117276 - 117500 110 74 aa, chain + ## HITS:1 COG:no KEGG:PPA0020 NR:ns ## KEGG: PPA0020 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 74 16 89 89 144 100.0 9e-34 MCSRLCAMSVWGPLEFGRGWQRIRTAVEAAMKADYTDQVVRPALGEWVDESMATTRGSSV LLLFIFQPFQKQLL >gi|302034478|gb|GL383157.1| GENE 116 117652 - 118128 440 158 aa, chain - ## HITS:1 COG:lin0503 KEGG:ns NR:ns ## COG: lin0503 COG1762 # Protein_GI_number: 16799578 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Listeria innocua # 18 147 19 148 155 95 41.0 3e-20 MSVLLNTDLISVNIEAPDRNQVLTVMADKLNGVRVAKEGFLDALLKREEIYPTGLPISCG VAIPHTDPQYVTRDALAVTTLHTPVLFGQMGGSEEDEVPVSVVILMALSNADDHLNMLQN IVKSIQDDNLMQTIRSATKPEEVVSIVRPLIPADTEDS >gi|302034478|gb|GL383157.1| GENE 117 118185 - 119441 1154 418 aa, chain - ## HITS:1 COG:SA0238 KEGG:ns NR:ns ## COG: SA0238 COG3775 # Protein_GI_number: 15925950 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIC component # Organism: Staphylococcus aureus N315 # 4 418 8 418 419 228 35.0 2e-59 MSIIKGILDVGAVVILPIVMLILCLIFRIPFGKSLKAGLMIGIGFSGLSLVIGFLMTSVQ SAVDYYRHMGGGFTTVDVGWAAVGAASFGVPFAAPAILLVVLINVVMILAKMTNVLNVDI WNFIHFLVPGTLAYALTNNAWIGLGVVLVLSVIDLIVAQHIAPKWQEYYGLTGTTCSTLS YITSAWPIAIGLNWVIDKIPGVRKIDISMEKFGDRLGFFGDTAFIGLIVGIFLGLMTRQP WQGVLVMGMGIATVLVLLPRMVSVMMEGLSTVGEGAKTFMKRHLGKNKDGSERELSIGMD VALALGDPAAITITVLMIPLCIAFAFIIPGMNYFPVGMLTVIVYMMPMICLACNGNMFRS LIIGAIYMFFVEWGASFFAPEATAMMHATGVHVSGSVTDAFFGYNLPNIIISAIHRMF >gi|302034478|gb|GL383157.1| GENE 118 119462 - 119764 324 100 aa, chain - ## HITS:1 COG:STM1613 KEGG:ns NR:ns ## COG: STM1613 COG3414 # Protein_GI_number: 16764957 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIB component # Organism: Salmonella typhimurium LT2 # 6 89 4 87 93 58 34.0 3e-09 MASEVKVLVACGSGIATSTVAQEKVKEILRDAKIPAKITKGTVGQLPVLQNGVDVIMLTT RYGKPLNKPVIQVFGLISGINEDAVAEEIISTCRDILNQS >gi|302034478|gb|GL383157.1| GENE 119 119754 - 120137 270 127 aa, chain - ## HITS:1 COG:mlr7108 KEGG:ns NR:ns ## COG: mlr7108 COG1063 # Protein_GI_number: 13475922 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Mesorhizobium loti # 5 63 1 60 341 59 50.0 1e-09 MAEMMNAALMYGPGDIRVEQMPKPTCPPGRFVLRVDAVGLCGSDIRNLTTDSRKGDYPFI YGHYGATSVQVQKAFELVINDKFPAEQVISKVLPLSRINDAIEFTRTGEALRVVLVPDGK ESEHHGK >gi|302034478|gb|GL383157.1| GENE 120 120598 - 122304 761 568 aa, chain + ## HITS:1 COG:lin0325_2 KEGG:ns NR:ns ## COG: lin0325_2 COG1762 # Protein_GI_number: 16799402 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Listeria innocua # 427 565 1 139 143 74 28.0 4e-13 MEQSVYTGVVARNSEFSTQLEHHERILLYLLDTPDTTIYDVMRDCYLSESVIKASLKRLK PQFEDHSLHLSLKGSSIHLDGNEIYFRNFLRSLVNTAMDAVVGQNDKINRYLPDVRLSDI ENLVVETLRDYYLEIDDIRLSNMVVNIAICVQRYSFPIEDNAATDLMMGNQSEMLCDQLL VGLRKLYPERPLSSADDVYLRSIVGATLGFGHGEFDHHSDSCDIYSTVSRCLDDTVEHFG LVIAKEELYGSVSKHVGRLMAHAPSMLYFRNTLRESLRSRSPFLYDAAVYLADKLSRLLG IFFTDDEIGLLAIYIGLYSEPAPNPNLVTAVVVCPRYQALRDVLLAGLVDHFADRMRIVD IVSSVAEADTCDGDIVISTTEEPSHRHTCVPISALMLDLDLSAIDSALLRASEKKSRIAT ASAMKRFLDPTLFFTGRSFDSWRETLDFMCGSMERNGIVPDAFRESVFLREGYSSTVFFR TFAVPHAMNFLAYETKIAVLIPSTPINWETSDVSLVLLLAINEGDYDDFVRFYQPLISVL YDRELFTELRSMSSYHEFMKFLDKQISM >gi|302034478|gb|GL383157.1| GENE 121 122565 - 122906 89 113 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|314917509|gb|EFS81340.1| ## NR: gi|314917509|gb|EFS81340.1| hypothetical protein HMPREF9598_02046 [Propionibacterium acnes HL050PA1] # 1 113 1 113 113 177 100.0 2e-43 MGTFVSVYDFLGYRLTTAPFHCSQSGVGGIFLLYFLGRLLRLVRARSSRVRAALGRSSAA RCSSRTLYRLLRCLRVGASVNADRAEASGTYLACYYLRSSIVGYLIGFVFHYL >gi|302034478|gb|GL383157.1| GENE 122 122877 - 123092 97 71 aa, chain - ## HITS:1 COG:no KEGG:PPA2391 NR:ns ## KEGG: PPA2391 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 18 71 41 94 94 101 96.0 9e-21 MFTYWTRRDKVPLSLRIFDERSMVVVDNSHDAKMLWVQQCSDYSDQVIARRTSLYLQCHD KLSQIVEDKAY >gi|302034478|gb|GL383157.1| GENE 123 123278 - 123454 106 58 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3027 NR:ns ## KEGG: HMPREF0675_3027 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 58 14 71 71 99 100.0 3e-20 MVARRFDVFDPVVVASGHATVASTLRACPSQGRYRLLKLLSEVAVGVACAHGVTAEYI >gi|302034478|gb|GL383157.1| GENE 124 123762 - 124103 223 113 aa, chain - ## HITS:1 COG:no KEGG:PPA0029 NR:ns ## KEGG: PPA0029 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 113 111 223 223 206 94.0 2e-52 MKLERLLITPGGVLALLHPTSPDADEFRTYTLGHELGPNAYREGILSPRDLWYVSLLHFR GPIEHPKDLVAWSHQQLAPTTWTFPDAALCTYETTTTAMRPRIRHTAAFGRAI >gi|302034478|gb|GL383157.1| GENE 125 124456 - 125100 283 214 aa, chain - ## HITS:1 COG:YPO2562 KEGG:ns NR:ns ## COG: YPO2562 COG0637 # Protein_GI_number: 16122780 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Yersinia pestis # 8 204 2 205 220 121 36.0 9e-28 MTRTDPRLADFQAVLFDMDGTLVDSTVAVESVWSAWAERNSIPTADVLAWCHGRNVAATI THFLPHITPETLQSMVSAQLDQECTQLDSVKPAVGGWELLIWLDAHRIPWGVVTNAPRRL ALARLGAATIDPPLLVTLEDVEHGKPAPDGYLHGARSCGVAPTRALVVEDSASGLAAARS AGTVVVAVGGRRDADVVCHDLVDLHRLLVQIRSK >gi|302034478|gb|GL383157.1| GENE 126 125087 - 125335 88 82 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313826226|gb|EFS63940.1| ## NR: gi|313826226|gb|EFS63940.1| hypothetical protein HMPREF9611_00524 [Propionibacterium acnes HL063PA1] # 1 82 1 82 82 153 100.0 4e-36 MRSRRIVAGEAPVSSTSVSTEVGEVPRELMIIFWRNNLIMHASGVAHIWQRIWAVLSTKG LAITASVCRQLAGQDGDNNDTH >gi|302034478|gb|GL383157.1| GENE 127 125217 - 125975 349 252 aa, chain + ## HITS:1 COG:Cgl0107 KEGG:ns NR:ns ## COG: Cgl0107 COG1349 # Protein_GI_number: 19551357 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Corynebacterium glutamicum # 6 248 6 249 260 181 45.0 1e-45 MIKLFRQKMIINSLGTSPTSVDTLVELTGASPATIRRDLTDLEGHGQLRKVHGGAVAVNL RGTPMPYSLRSAENAESKTAIAQLVSRLVTDDMSVIIDNGSTMVAVAQALQERPITALCL SLRAALPLGGGGVATVSTPDGTLMPESLRYEAASCLRALGEFRADVAIVGTCSASPAMGL TVTTHQDAQVKRAILASSARVVLAATGVKLSRTSSFRFGDIEDIDDLVTTRDAPQVTLDA FRVAGSRVYVAD >gi|302034478|gb|GL383157.1| GENE 128 126197 - 126370 61 57 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLTINAERRRARISTTLGPVMIGMDPHTRSITIDVMDGQETAIAGGRVTTVAPRPPS >gi|302034478|gb|GL383157.1| GENE 129 126487 - 126591 66 34 aa, chain + ## HITS:1 COG:no KEGG:PPA2392 NR:ns ## KEGG: PPA2392 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 34 107 140 140 74 100.0 1e-12 MTLKESVPIHRVRRCEVLVIVQVIFEFPDLYLCL >gi|302034478|gb|GL383157.1| GENE 130 126597 - 127334 457 245 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3034 NR:ns ## KEGG: HMPREF0675_3034 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 245 1 245 245 450 100.0 1e-125 MVKEQRPCIIGTVAISTTLHLAPNDIGAFTDTDELRILMESAESHGYFDPPPLENREYLI ERPIGVVVSDTSQPEYLTLRLDCNPERHILGRPGMKIMLVLADALRLIGLSTPQSIDVEC VYFDPRDWDLLNPDPEDHIHMIGTLSREVCRWMSPHLTHTWHTTATTNPDLDPHLAQNTI NRWFPPDFEYPWLGHTPQAHQETLTWHMPDDITALGWLFDLITLLQGQPPQHIHATPNEQ KIRPW >gi|302034478|gb|GL383157.1| GENE 131 127328 - 127852 299 174 aa, chain - ## HITS:1 COG:no KEGG:PPA0033 NR:ns ## KEGG: PPA0033 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 4 174 9 179 179 256 92.0 2e-67 MYQKPAVALLALTLALAVPATASASPTTSPSPTASGNSDLRPEQGSAKVASKAAPFISKI DDPHYSSSHAGSVNVHGWWLDNYNNFSGMKARVTVYLWAKKGSQWVQVNKIPTKKNPVTV YAGGGGGKRASGSVSCRSHKPTWYHGQVDVDIIDAIDTSNRPNSQDRKLNCQPW >gi|302034478|gb|GL383157.1| GENE 132 127831 - 128088 148 85 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|328756045|gb|EGF69661.1| ## NR: gi|328756045|gb|EGF69661.1| hypothetical protein HMPREF9579_00532 [Propionibacterium acnes HL087PA1] # 1 85 1 85 85 151 100.0 1e-35 MTASQRSRRDLPLACRAVVLEQHRVGPDSRHPPIQRSLELFHTPPTVVVAMLYYIWHGPA TLYLTPILRLTPSGDTSYLCIKNPL >gi|302034478|gb|GL383157.1| GENE 133 128001 - 129059 857 352 aa, chain + ## HITS:1 COG:MT3881 KEGG:ns NR:ns ## COG: MT3881 COG0079 # Protein_GI_number: 15843395 # Func_class: E Amino acid transport and metabolism # Function: Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase # Organism: Mycobacterium tuberculosis CDC1551 # 1 340 1 340 353 274 46.0 2e-73 MSQDRRDVVRGLPLYKQGASHGENAVKLSSNENPFEPLPSVIEAVTRTLPRFNRYPSMSA EEVRSSIAGHFGVDVSQVAVGAGSTEVASQLMHAFAGAGDEIIFPWRSFEAYPILTQVAG ATPVPAPLTKDLRHDLDAMSAAITDRTRLIFLCTPNNPTGTVLHTDEVVEFLARVPQNVV VVMDEAYYHFNRDDAAVDGLTLLNDHPNVVVLRTFSKAYGLAGLRIGFAISAPEISDDLR RVATPFTVTTLAQQAAIASLAAEDELNERVNRIVAERTRVFDELTRQGWKIVPSQANFLW LVTGDDTDRIDEVMVSHGVFARCWSGEGIRLSIGLDAENDRAIEALSQAVKG >gi|302034478|gb|GL383157.1| GENE 134 129063 - 129941 757 292 aa, chain - ## HITS:1 COG:Cgl1119 KEGG:ns NR:ns ## COG: Cgl1119 COG4667 # Protein_GI_number: 19552369 # Func_class: R General function prediction only # Function: Predicted esterase of the alpha-beta hydrolase superfamily # Organism: Corynebacterium glutamicum # 4 290 8 294 298 246 44.0 4e-65 MTTSIDGTALVLEGGGMRAAYTSAVIVKMLGLGWKFPHVSGISAGSSLTANYISRDPERT RLSFTDFVADPRFGNLGTWLAGRGYFDGEYIYQRTAEPHQALPFDFLTFCASSQAFRIGA TRTSDGGQEWFTREDMKTMNDLMVRVRASSTMPGFMPPVTIEGVEYVDGALGDSGGIPID GAQLDGYDRFFVVCTQPRDYVKNEIKRPQVLRQLFRRRPSVAEAAIARPAKYNATREMLR DLEADGKAYVFYPRVMPVTNKEKNVTKLRQAYALGMAQVNAELPQWRDFLGV >gi|302034478|gb|GL383157.1| GENE 135 129993 - 130559 461 188 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|239918508|ref|YP_002958066.1| acetyltransferase, ribosomal protein N-acetylase [Micrococcus luteus NCTC 2665] # 19 187 24 196 204 182 52 3e-44 MTRPRDVPPCDGPAQVGKVEVCPLVEEDLEWLWHWNVEVVDPQWKQWDGPYFGPDDDRSF AEFAEEWRSGLMSGHRAVVTVDGRRAGFVSRFEEPPAGGGWWEVGIVVFRPTLWGRGVGC RALRLWTEATFATTDAQVVTLTTWSGNGRMIHCAGAVGYRECGRIPQARSWQGRRWDLVT MALLRDDL >gi|302034478|gb|GL383157.1| GENE 136 130573 - 131232 379 219 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3038 NR:ns ## KEGG: HMPREF0675_3038 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 219 1 219 219 395 100.0 1e-109 MRRGVVTSVLLACTLVSGCSTLKPLTEPQPTPTVSASKVPQGIDAHPAWAVPVARSGKKL GHFGDDRIRIEVDQAAIAKAPEDSIMVNPQDGTPVVSKGSSIVLVRYIVTNVSQEPINLG LGTVTITARYPDWTWRQPLVSVLAPRADAAHKIVTTPFAPGTARPPYVLGLGESFMVGAN YPYETAEQLDVTATVVVCDTAGAVDPGLGWTITGKVHLA >gi|302034478|gb|GL383157.1| GENE 137 131485 - 132123 272 212 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3039 NR:ns ## KEGG: HMPREF0675_3039 # Name: not_defined # Def: SAF domain protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 212 1 212 212 347 99.0 3e-94 MSVTTTPISARATTPSPRLRRSPRLIVIGVLCACLGGLGGAVAWHRASHADQVLVMTRAV GQGDIVRNADIGLTSVAVDRAVATIPASQLDKIVGRHALVDLSPGQLLGSHSVGELRVAP GRARIGLKLAAGRLPTVSLPAGARVTVIETSPDKDTGTVSNLSTADAVVVAAPKATNDHG SWLVDVEVDSGNAARLADLASLDRIALVERGQ >gi|302034478|gb|GL383157.1| GENE 138 132123 - 132941 408 272 aa, chain + ## HITS:1 COG:no KEGG:PPA0040 NR:ns ## KEGG: PPA0040 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 272 1 272 272 480 99.0 1e-134 MSIILLTSPGGAPGLTTTALGLALTWPRDVVLVDADPCPGHVIESGYLTGRIPPRPGLIG LATAFRDGADPVQTMWEETIPLPHDSGDRMVRLLSGYGHLGQASLMGAAWSSLASAMIDL GQAGVDVIVDAGRLGPETLPGSLVSRASLIGIVTGSRLRQLAGLSMRAEEVEAMSSATTG TVGLVIVGPGRPYNSREIGHQFGLPVFGDVVFNAHAAAVLSDGEPAGKRWSRGRYVTSMQ SMAESMRERIRRADQAITGPEILSTSAMGVAS >gi|302034478|gb|GL383157.1| GENE 139 132938 - 134416 677 492 aa, chain + ## HITS:1 COG:PM0849 KEGG:ns NR:ns ## COG: PM0849 COG4962 # Protein_GI_number: 15602714 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Flp pilus assembly protein, ATPase CpaF # Organism: Pasteurella multocida # 132 455 64 371 425 121 31.0 4e-27 MTIDHAVSRYAQDAPVVPLDDGKDLAGVLSRISPSPHVSPAAVSPRPNPRRFEAKDIDWR TVVSLRRKASERISSERASHRERTGVDLSGDDVRMLGRSIVRQAVESHAEKLTAEGQALW SAQTKDAYVRAVMDAIFGYGRLQPLFEIQDAENIEINGCDRVFVQYGDGRREPGPVVADD DAELVEAIRFLGESANPPRPFDDAHPTMTVALGSQYRLHAIGFGLSYRPSVVIRHHTLTR VTIDDLVNTAMMPHHVGVLLRAAVLARRSIVIAGDQGAGKTTLLRALVDAIPPTERFGTL ETDYELLTHLNPDRDNMVAFQATVGLGEKVDGHCVGELTVADLVPEALRQNLSRLVVGEV RGAEAAAMFEAMQAGAGTMSTTHSHSATSTMDRLAGRVAMGGVMTIEEAYRQIAHNITFL VHVTLVDDTWRGGTRTRYITEVRQLTGALENGRPVTHLTYAAPTPTSPGVFHPDSALVAE LSRYEPEVTRWV >gi|302034478|gb|GL383157.1| GENE 140 134407 - 135288 338 293 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3042 NR:ns ## KEGG: HMPREF0675_3042 # Name: not_defined # Def: type II secretion system F domain protein # Organism: P.acnes_SK137 # Pathway: not_defined # 3 293 1 291 291 375 98.0 1e-102 MGMNTAIAALLGGLLVGGVVMVGIGIAPIHQLSTGQSTSLWTRVDNWFSRLPRRSRVHGL TGLGIGVVGYVVTGWAVLLVIVPVLAVVVPALLADPPRHDLDVMRALERWVRLVSGSAST GKSVIDAIRATRRQAPEPLIEPLTRVVARLDSRWDTRSALQGLADDLDSADADQVIAAIM MATERGGTGATGTLDALAASLQERIRAAREIRVERAKPRVVVRQVSIIIGVVLAGALILG REYLVPYRTGVGQLLLCCYAGLYLAGLIALSRRSKPRRRARILLRRAGEANYG >gi|302034478|gb|GL383157.1| GENE 141 135281 - 136183 648 300 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3043 NR:ns ## KEGG: HMPREF0675_3043 # Name: not_defined # Def: type II secretion system F domain protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 300 1 300 300 474 98.0 1e-132 MAESTVILAAICGSLLACAPVFVVSGRRNAPLRLSDALAGLSDYGRQDAVVGPVAEGGRL ERWGTRAAIRWPRMVSERSRRTLILQGRTPGDLVIEKAVMAMGGMLVPALARAVAAACGD TLPVTPVGLAVVLAVVGWFIPDTRIRSRSKAVRQDAAEVVLVYVDLVTLARLANQSAPRA LVEAAQMSDHPVLTRIRMTLERSRLEQQSPWAGLDGLSDELDLPELAELVEVLRLDDQGA SLAGALRARVHEMRDAHLNQEKAEAQTASESLTIWMVIPVLVLGLVLITPPLLIMAGVAS >gi|302034478|gb|GL383157.1| GENE 142 136253 - 136465 154 70 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3044 NR:ns ## KEGG: HMPREF0675_3044 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 70 1 70 70 101 100.0 1e-20 MTKEVAMKHVNTVASVVLPMIAGIPPLVEKRDERGLSQSTENAILLVGAVSIATVVVTVI KGYVSSNLPK >gi|302034478|gb|GL383157.1| GENE 143 136534 - 136842 179 102 aa, chain + ## HITS:1 COG:no KEGG:PPA0044 NR:ns ## KEGG: PPA0044 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 13 102 131 220 220 97 100.0 2e-19 MWPVVLLVVVAVIQTAVVLQARATVTEAARAAVRVQALRGSHAGEAEATARDVAQTSKVT DVTVTVSTTDSLVRVDVEGRAAALFGAVVAVRGHAVAVEEGT >gi|302034478|gb|GL383157.1| GENE 144 136992 - 137348 162 118 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3046 NR:ns ## KEGG: HMPREF0675_3046 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 118 52 169 169 193 98.0 2e-48 MIAAVATGSWRISEVKADAQSAAQVAARAGSVASSVGEGIAVGQRVGLAELAGTRCSNPA IAVDSSDLTLPVGSAGTTSARVSCTIKLSDLLVPGMPGSFHIESVAHSTLDSHRERYS >gi|302034478|gb|GL383157.1| GENE 145 137345 - 140107 952 920 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3047 NR:ns ## KEGG: HMPREF0675_3047 # Name: lysM # Def: LysM domain protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 920 1 920 920 1586 98.0 0 MKISPVRARIHGALAVVALLLLVVGSPAALVAWGHLDATTVLRPAGWLAPDDGSIFLTVV TVIGWAAWTVFCVCVVAEAVGMATSQRHHVKLPGLGAIQEIAAGLLVASLTVLSPLTRSA VPPAPVSLVATAAAAPQPAPEAQMDSDSGHDEDVMTVTVGPHDDLWTLAETWYGDGTSWR RIVAANPDVDVDHLVVGQRLALPGATVTVPAGHTGAGRPIDTEQLNQIAPPSEMSKVRTI TVEQGDTLSGIAQTQLGDASSWPAIWHLNEGIIADPDHIEPGWELVLPDSPTVDKRASDQ HTDEQGGKREKSTPAETPTTESTPPVLPEGGGDSTATVNETKVEPHTAAGADQAVSMAEV GQSPAEILRTALAGLSLFLAGGVAGTVTTRRRQQLFTRPLGRRIPPVSGEPRRAKRVLDA AADQLDESASSRDTAALAMTPTTVVLGTCDPQTPVVVDLADVGGVLAVNAARDLATAMVA SISLSLVAAPWSGGIDIVAVGEDLAWLAHTGSDDVQLADEDEVVEGLAGLSNEASEYPAT ITRVVLSLSPLNLPSPASLAAAGIVIVMPGVGGQKITVTDCDHAEFHGQSFTPQIVTSPM RRAVVELLETTARSDTEPAPWWEPRRGDEEGSDPPPVMDKPCAVLPPSDAHLTVEEETVL TSTMTSDVAHLPATGGQVPSPILRLLGPVDLLGARGNPPTKARRQCLEYCAWLLCHPGAR SVQMADALMVAEPTRRSNVSRLRRWLGTDDAGRAYLPEGYDGSLRLADAVTSDWERLELL VSGGVSTAPLANLVSALDFVRGAPLADAAPGQWHWAEEWRIDMIQMVRDIGVEVARRAME IRDVELASRALARATVACPEDEVLLVARIKLADELDDRGEVERLVYVLSRQARRLGVDLS EETITVLQEVMEGHARARVV >gi|302034478|gb|GL383157.1| GENE 146 140161 - 141504 1183 447 aa, chain - ## HITS:1 COG:MT0042 KEGG:ns NR:ns ## COG: MT0042 COG0477 # Protein_GI_number: 15839414 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Mycobacterium tuberculosis CDC1551 # 3 399 15 400 433 134 28.0 3e-31 MFWQNLRHLWRRRDFRKILGVRVATQAADGTLQVGMASYVLLSPEQQPDAWSIAMVLAIT LLPFSIIGPFVSVVLDRWSRQRILVYTDGLRCLIAVGLGILVWNGARDKPSHLALLIGLL IAMSLNRFLLTALVAGLEYTIDKRDYLTASSIMPTIGPLGLMIGAVVAAAVRMIAGRHIP VHHADTIIFCISAALFAVSVALGLQFSRRELGPPPVDRSRTMRAVAGDVVDGFRYLGKVP LVGHSLTLIGAQRVLFGVYSVAMILGYRNRFHVQSDINGAMADMTVWAVAMGAGFVLSAG FMPVLVHRLGMRRALMALLTATAVIQAFPGATPNRWGLLVAGFFVGLFAQSLKAGVDTIC QAHITDGYKGRVFIAYDMVYNAMFVAGSALAALVLPIQGLSGPHIVGLAIAYAVVAVVFA LATRAHGNDVFDKGSALGGLPAANPEE >gi|302034478|gb|GL383157.1| GENE 147 141435 - 141680 77 81 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MATVHVVLRPQVGVFPVLLRRPCSLIDEANLAGPLRWIPRECSSVHPLGSIEASPKETMC SGRTCATCGDAATSGRFSGFV >gi|302034478|gb|GL383157.1| GENE 148 141874 - 143583 1503 569 aa, chain + ## HITS:1 COG:CAC3201 KEGG:ns NR:ns ## COG: CAC3201 COG2759 # Protein_GI_number: 15896448 # Func_class: F Nucleotide transport and metabolism # Function: Formyltetrahydrofolate synthetase # Organism: Clostridium acetobutylicum # 7 569 1 556 556 538 47.0 1e-152 MIGAMTMKSDLEIAREAHLDPIEKVAARAGIDEKYLEPYGRGVAKVDLDVVTHNRDHSCG KYVVVTAMTPTPLGEGKTTTAVGLAQGLEKIGKHSVLALRQPSMGPTFGIKGGAAGAGYS QVLPMEKLNLHLTGDFHAIGAAHNLLAAMIDNHLHQGNELDIEPHSISWRRVVDINDRAL RNTIVGLGSRVDGVPRETGFDITAASEVGVILSLATSLSDLRARLGRIVIGYNRSKEPVS AEDLHAAGSMAVILKDALKPNLLQTTENSPVLVHAGPFGNIATGNSSVIADRVGIGCGDY LLTEAGFGADMGAERFFNIKCRIGGMRPDAAVLVATVRALKTHAGRYKVIPGKPLPPAML EDNPDDVLAGAANLRKHIEIVREFGVSPIVALNVFPTDHPDEIDAVRKVAEAAGAHFASS THVVDGGDGAVDLAHAVVAACDHKADFRYTYDLEDSLVEKLTKVATKVYGADGIDIAPAA AKELAHFEDLGYGTFPVVIAKTHLSLSHDPSLKGAPTGWRLPVREVRAAVGAGYIYAICG DMRTMPGLGRHPAAERIDIDDNGETIGLF >gi|302034478|gb|GL383157.1| GENE 149 143689 - 144102 355 137 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3050 NR:ns ## KEGG: HMPREF0675_3050 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 137 1 137 137 263 100.0 2e-69 MPYPQLVTSKRAEDARLRIEFEERARRQEAVQAQRLIDDFLVMARAQGMTPVPLRAQLMD GHEARTDKRGWYLNAKHSLAIGENGEYYHLVVTGGFAERLRGVKLHPSLPPMHIGRGGRD GETGELKEFLTWLIDSR >gi|302034478|gb|GL383157.1| GENE 150 144099 - 144620 451 173 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3051 NR:ns ## KEGG: HMPREF0675_3051 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 173 4 176 176 338 100.0 6e-92 MLFAVTKFKRVMALLGVIYLVTVGGLYFVLADRSDNFIHDGQIIQGTVTAVYSHRSVSTG ATKYLMHAEGGNVALISYTYDGATDTVWSNPYRDIKKYHVGQKVDLVIRATPNHPDDAIV TVRDHTILGLRLIPWGFLASAVIMTAWFGRDYLRSKRRRRLGGQRHAPAAVEA >gi|302034478|gb|GL383157.1| GENE 151 144645 - 145319 393 224 aa, chain - ## HITS:1 COG:no KEGG:PPA0052 NR:ns ## KEGG: PPA0052 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 224 1 224 224 383 99.0 1e-105 MTFTSTTPRRLRSLWQELCSHPRAPWRTDLICRGCYPEDLPQRLRQDDAAALRALIAARS GAGQTSEFAGMALIQAILPTLVTIANRDHQACLDDYIGEAWVVIVTFPLSRTNKVCTNVA LDCLHAISSRRQHSSPETPAESIDISAPEMQEPGQVASDLLSAAEELGIITPTSAPVLRS VWVEALDCTTAAQRHNTSPTAVRARCSRASRAMRQHRDELLAAS >gi|302034478|gb|GL383157.1| GENE 152 145517 - 147988 1763 823 aa, chain - ## HITS:1 COG:Cgl2500 KEGG:ns NR:ns ## COG: Cgl2500 COG0577 # Protein_GI_number: 19553750 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Corynebacterium glutamicum # 5 822 11 853 853 200 24.0 8e-51 MFTEALRELRHHPGRLVATLIAIAVSVGFLVGISMFVRTQGVALGKEQAVATSKADVVVD TGGAVADPDEVTRTIKETQGVAAVDTVLSTSMPAAHGHDSVMIDLHQVPAEPFRWSTVKD GSWPSKADEVALSEDAAKRLQASIGDTVAFSGHDLKVVGITDDPSALQTAPAYVGQLPGQ TPDTWVVKAKDGTAPGQLVTNLEKTLPKIKDAPQFNKDDAGATISTADSFQKKTINSLTE DFDVTKYMLMVFGAIALLVGAIIITTTFLILLAQRRRQIGLMRAVGASSGQVRRRVLAEA IVLGVLGSMLGVVLGILLTVAGTAYTGALAFGLAWPWGDIIVEFLIGIVITVLAAFLPAL RATRVAPLEALRPVPTVEQKRRIGIARIVVCSLLAVAGIALSVGAIVGTGTSIITMAILS AMCLSLTLLIATPLYVPWLIRAMGFLLRPLGPTARLSTSNANRNPTRTSLTAVALMLAIG LSVTLQVGISTTRTTVMDQINEHFPIDLTLTNRPSYDPNTGQETASTLDTSALKTVQDLP NVKDSIVLKGGFAESDLSPHAHMLSGNPDEIAKVAPSIAKEMKPGVALITSIDNPPQTMT FTSSKGKVTLKVTKVHGLSEGDVVVNQEDLKRIVPSVTDQSIWVHLDDRSNLASTLTVMM SMSSSSSQHMDIGGGALIGGIVELILKVLLMVMTALLGVAVLIALIGVANTLSLSVLERR RESALLRAMGMQRRGLRLMLLYESIQVGMAGVIVGIVAGFYFAWLGIRSVFRVASDTIPV HFSIDWPWTLSLIAICLVAACLASVLPGRRAAKAIPTEALANE >gi|302034478|gb|GL383157.1| GENE 153 147988 - 149022 262 344 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 120 325 12 219 245 105 32 4e-21 MKGIMSDHDRPYESDEPQHSLDHAIPSEPGSFEPPRYGTSSEWSGDSLRPIGEQDRELGQ PWGLQAPAPQPPHTAKPFPAHPFNTATPAQRGGLAPGLLNTPIETDAAAGMQLTKIFGEG ETRVTALNSISVRFTRGTFTAIMGPSGSGKSTLMHCLAGLDRITSGQVFLAGMEISNLPD AKLTTLRRDNVGFIFQSFNLLPMLTAEENILLPLDLAGRKPDRALWDQLITGLGISDRLK HRPSELSGGQQQRVACARAMITKPHVVFADEPTGALDSKSGANLLGYLRHCVDDLGQTII MVTHDAKAASYADRTLMLLDGRIVDDIASPTAESVSEAMAGLEG >gi|302034478|gb|GL383157.1| GENE 154 149130 - 149786 536 218 aa, chain - ## HITS:1 COG:all4635 KEGG:ns NR:ns ## COG: all4635 COG2197 # Protein_GI_number: 17232127 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Nostoc sp. PCC 7120 # 5 213 2 209 219 179 50.0 3e-45 MPDPIRVILVDDQSLVRSGFRMLIESEDDMEVVSEASNGLEALDVLRRMPVDVALMDIRM PQMDGVEATRRITASPLDTKVLILTTFDLDEYVYAALKAGASGFLLKDARPTELLSAIRN VADGDAVVAPSATRRLLDHVVPTLPNDPKAADKRLSVLTDREKEVLVEIAKGATNAEIAQ TLYMAEGTVKTHIGRLLSKLECRDRVGLVLFAHEVGLL >gi|302034478|gb|GL383157.1| GENE 155 149805 - 150353 283 182 aa, chain - ## HITS:1 COG:no KEGG:PPA0056 NR:ns ## KEGG: PPA0056 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 182 22 203 203 349 100.0 4e-95 MCGVTLDDRDMKYYYAVLTHGITRKLDILLLTVAVALGFFGLDAWVILPESHTPLVKSLG IPAASWLVALILGLILRPFPTKLTGKVDANAMEAAIAKKTIMAFCGMTWPALILFVLAFL LYLPRSFVLLAMIAHGATLFLLLHSTDQRLEQFAETWCGDHYDPANPEIDTFLHGTRSVS FD >gi|302034478|gb|GL383157.1| GENE 156 150489 - 151319 655 276 aa, chain - ## HITS:1 COG:BH1926 KEGG:ns NR:ns ## COG: BH1926 COG0395 # Protein_GI_number: 15614489 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Bacillus halodurans # 4 276 13 285 285 254 46.0 2e-67 MRRRVHIGAFFRHLFLILGGLISLFPFYWMFVLASRPSSVIYKYPPVLTPGNRLGENVHT ITDKVNIWAAMANTALVATTVSVLVLLISSLAAFAFAKFDFPGRNVLFVIVLATFLLPTQ LATIPQFVLMSKIGWVGDLKAVIVPSLASSFGVFWLRQYATNAIPKELLEAATLDGCGFW HQYVHVCLPIIRPAMAFLGIFTFIGSWNDFMWPLIVLNDPSKLTLQVALSQLKTAHGTDY GMLMASSLIAVVPLLVVFVIGAKQLIAGISEGAVKS >gi|302034478|gb|GL383157.1| GENE 157 151316 - 152281 843 321 aa, chain - ## HITS:1 COG:BH1925 KEGG:ns NR:ns ## COG: BH1925 COG1175 # Protein_GI_number: 15614488 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Bacillus halodurans # 25 317 15 300 305 197 39.0 2e-50 MSSPHTVTATPTDELHHPSVGRRMRKALPIYAALSPYFFFFLVFAAIPMIFTLLLAFTDW SGLGSGHFVGLENFTYLISDHLFYKSLGNTLILWAMGTIPTLIIATIVALMLNKTMRFST TYRVIYLVPNITSMVAMGILFSSIFSSQFGLANAVRNLLGQENIAWLQNEWGIKIAISSL TVWSFVGYNALLILAGLQAIDKTQYEAAAIDGANGWQTFFHVTLPQLRAIVLFITLMSTI GSLQSFTEAQVLTSSQSAGAASAGGVNNSGLTMVLYFYSVAFQENRYGYGATIAWGVFVV VLFFSIINWLVTREHDRKVAR >gi|302034478|gb|GL383157.1| GENE 158 152297 - 153601 1347 434 aa, chain - ## HITS:1 COG:BH1924 KEGG:ns NR:ns ## COG: BH1924 COG1653 # Protein_GI_number: 15614487 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Bacillus halodurans # 3 425 1 422 426 179 27.0 7e-45 MNLSRRHLLSGGFAGLGVLGVSALTGCSTSTEPKSDTGAGDAKKLVLWMWPEGFDKQTLA TVAKAQPSYNVRQDIIGGDFKQKLTTTFTAGSGLPDLTGVKGEDIAFFRDHAGYFVDLNT LGAKDIESDYLGWKWAQATTTDGKQLGIPSDIGPTALFYRADIFEQAKLPSDPDQVAAQM TTWDAFIEFGTKLLAAKKKTYLVRNAAGLFGTIWPQSGKGFIDEKKTFIGDQDHIRNAWD ITVKALKAGIIATIQSDTSDAAAAVNEGRLPADFGASWHLADLMVDAPQTKGKWRVCAHP GPAINQGGSFLSIPAGASDPKASFAAIRELLSVKSQIREYVHNGNFPVSPKAYDDPKVSG PVDFLGGQHAAKVFGKAAESVRPLFEDSNSGAVSAPFAAQLERVESSGKNPETAWHDAVS EAKRIARQLHLTVR >gi|302034478|gb|GL383157.1| GENE 159 153933 - 154172 117 79 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVHDVAEVVVHARNELDTSPGTLDDALIFQGDAIASGRGHTHVQIPSDVDGSHGRPVPEQ FDDRVVTSGLEHVPHGTDP >gi|302034478|gb|GL383157.1| GENE 160 154053 - 154706 459 217 aa, chain + ## HITS:1 COG:HI0615 KEGG:ns NR:ns ## COG: HI0615 COG1349 # Protein_GI_number: 16272557 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Haemophilus influenzae # 3 209 33 241 249 102 29.0 6e-22 MATARRDCIALENKGIIERSWGGIQLVTSVDDHFGDVMNHHTQAKAAIARKATELIHDGD TIIMDIGTTVHHLSGLLTGRSITVLTASLPVFETLRTAPDVTVVVLGGVWSERYQCFDGQ FVADALTRHQADLAFLGCSGVSANGRVRDTSRSQAYIKQAIIAAASRSYLLVDSEKFPGV GAHSPFTLEEVSGVITTGPLPPDFDAHCESTVEVITA >gi|302034478|gb|GL383157.1| GENE 161 154703 - 156091 1299 462 aa, chain + ## HITS:1 COG:YPO0166 KEGG:ns NR:ns ## COG: YPO0166 COG1486 # Protein_GI_number: 16120509 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases # Organism: Yersinia pestis # 2 446 5 422 437 202 33.0 1e-51 MKLTILGGGGFRVPLVFKALAHDTSPQRVTELRLYDTDPLRLGVIETVVAQLARALPHAP SVVATTDLPTALAGTDFIFSAIRVAGTHGRALDESMCLARGVIGQETVGAGGISYALRGI PVVLDLVEQITRYAPDAKVINFTNPAGVMTEVMQRRLGDQVVGICDSPVGLARRILTTLQ RAGLAPADLGSLFDGDGRIHIGYSGLNHLGWLTSLNVDGVDVLPRLLERPDLIESFEEGR LFGADLVQALGAVPNEYLHYYYYSRDDLAADRKAEAPRGAFLEAQQNQFYTQAQHTDDVA GLWEATRLEREETYMATNREVSGEFERDEADLETGGYDKVALAIMHAIANDVPAELILNV ANHGALPDLPDEAVVEVPCRVDGAGIHRLPTPALPDHARGLVVNAKYVEQRTIDAAVNHS RTAALLALSHHPLVDSVHVAEQLLDDFADAFDGLEYLKDAHA >gi|302034478|gb|GL383157.1| GENE 162 156084 - 159212 1746 1042 aa, chain + ## HITS:1 COG:lin2123 KEGG:ns NR:ns ## COG: lin2123 COG0383 # Protein_GI_number: 16801189 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-mannosidase # Organism: Listeria innocua # 58 1039 55 1029 1032 455 31.0 1e-127 MHDHTELIQDRIGHLKERLEREITEKICPLQVTAWQVPGEPVSFKEAAAANYQPFPPGTW WGAPWSTWWLHVTGTLPASHAGEEVDLSMDLGFVGDWAGNQSEAMVYTANGRPLKALNPR NHRIGLNHGALAARFTKEGEPLIGADGDVELWVEAAGNPDMTQHLGGPTELGDRRTAGHE PLWQFKGAELSVRRNEVWGLWLDIDVLDGLMRQLPAESTHRARLLRGLEQAADEVDHQGI VAGAGPARQILAGYLDSGANSSAQQMTAIGHAHIDSAWLWPLRETRRKVVRTFSNVVALA QEYPDFHFACTSAQHYAWLQESSPELFERVQEAIERGQWHPVGGMWVESDANLPSGESLV RQFTSGLRWMREHLGVRPDCLWLPDSFGYTGALPQIARLAGMRWFFTQKLSWNTANTLPH HTFWWEGIDGTRIWTHFPPVDCYDCVVSAQEVKKAEANFKEKGVARRSILPFGYGDGGGG PTAEQVERARRFADLEDAPQVRLGSPDDYFDQAQEDHPQASVWRGEMYLEFHRGVYTSAH PLKNGNRRAEVGLAAAEWLAVMAARTGHPYPYQQLEQLWQRTLLLQFHDILPGSSIAWVN QEAIAEFTAIRAELNQLMDDAWQALLQASGGETVGVSLVNPSQADRREVLTVSDRPVLVQ VPAMAAKSLTDAVVDPEHPVHVQRGRDAIRMTNGLVDVCIDTRDGLVNSIVDLVSDRELL LSGQRANRLVLHPDYPDCFDAWELQQQYRHSGDPVDRVTDLRVTESLLRAQVRVERHADQ SSFVQTITLDADSRAVEFSVDVDWAERARVLKVDFPLDVAARSSRDEIQFGHIGRPIEAN TSWDDAHFESCGQQWMLLAEPRYAVALVNQSSYGHDVSPAGGDEHTPTMGVMARLTLLRS PQSPDPHPDQGCHHLVYSLLTDARVESAHVEAARLNQPLQVRSGTVELPSTARIEPVHGT AVIDAVKQAFDGSGDLVIRIHEAEGARSRVRLLLDRDGCVSEVDLLEDPIDEPTQQLPAS TCSRVELTLRPFQILTLRVSQR >gi|302034478|gb|GL383157.1| GENE 163 159209 - 160264 900 351 aa, chain + ## HITS:1 COG:Cgl2398 KEGG:ns NR:ns ## COG: Cgl2398 COG1524 # Protein_GI_number: 19553648 # Func_class: R General function prediction only # Function: Uncharacterized proteins of the AP superfamily # Organism: Corynebacterium glutamicum # 168 317 1 148 155 89 36.0 1e-17 MKLLLVCIDGLRLDIALPEALQRDPGFTHPDHPADPRFVRGVGQGEPVPEHPAPALDHTL PVDRAPKNLAPTLARLVRGDDRSQGTIIPMWMTPPTDSAPGWTTILTGATHEQCNVWWNE FVGHDLARHPDILSQVFFANPSARTLAAATWDAFVSPYGPGPIIHQRVDQQRTGQHQLFG PDLSQGIDRADEQVSSWAAWHLLHEGPDAAVVYFEGVDHAGHSFGADSEQYQQAVGHVDE LTRHLVKAVAERHEQLGEQWLVAVTTDHGHKPEGGHGEDEVEVRRSFLAAHHIGGTLPEP LLRTAALRSHEVTPLLLQAMGVHPGHMDASDVGVLRDVEPIGPSREMDFEW >gi|302034478|gb|GL383157.1| GENE 164 160258 - 160902 470 214 aa, chain + ## HITS:1 COG:yqaB KEGG:ns NR:ns ## COG: yqaB COG0637 # Protein_GI_number: 16130602 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Escherichia coli K12 # 12 181 7 179 188 86 33.0 4e-17 MVTMYPPQQVDAVLFDMDGTLLNTLSAWCVASEHLWGTSLADADSAKVDGGTVDDVVELY LRDHPQADPQATVERFMDILDANLAGNTEPMPGADRLVKRLSGHVPIAVVSNSPTRLVRD GLASQGWLELFDTVLGVDEVAAGKPAPDPYLTAARRLGADPSRCVVIEDSAFGLRAGRAA GAWVLTVGRRLKGQGDMWVSGLDDERVTSWEPHR >gi|302034478|gb|GL383157.1| GENE 165 161055 - 162194 763 379 aa, chain + ## HITS:1 COG:lin0759 KEGG:ns NR:ns ## COG: lin0759 COG3538 # Protein_GI_number: 16799833 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 3 371 44 423 432 362 46.0 1e-100 MSRDEHGVFVVTGDIPAMWLRDSSAQLWPFLIMCDLPEVTRQIGDVIARQWHCIDVDPYA NAFNSGPTGAHFDADDLDVADELWERKYEVDSLAFPVDLAWRYWQATGSPEHLNGAVHQG CIRIIDVWSLEQDHARSTYRHVRPAEPSDTLGRDGSGTPVGHTGMTWSGFRPSDDACRYG YNIPAQFMAMRALRQIREFCRVWDDEDLVERATKLADEIDAGVRQFGIVEDHLAYEVDGL GSVLEMDDANMPSLLSLPLTSDLGRDDPLYQSTRRWVLSAANPYLFSGPAARGIGSPHSP KGYIWHIGLAVQGLTGDDAEARDCLETILATDGGTGWTHESFDPTDPTRFTRGWFSWSNS MACLLMMNVAGIDAIIGAN >gi|302034478|gb|GL383157.1| GENE 166 162178 - 163716 817 512 aa, chain - ## HITS:1 COG:CC0447 KEGG:ns NR:ns ## COG: CC0447 COG3525 # Protein_GI_number: 16124702 # Func_class: G Carbohydrate transport and metabolism # Function: N-acetyl-beta-hexosaminidase # Organism: Caulobacter vibrioides # 66 508 90 519 757 247 33.0 3e-65 MPTNDTLIRGLCPQPRQVQLTEGQFPLPSVLTWTGPDEVINAVTILTERLAPALDVVRAT SHTDDASLTVIVDPALEAEGYRIDIDAQVRITVGSPSGARWAVQTLLQLLTPWVYGPGPL ALKHLCLPKGVIVDAPHHSWRGAHLDVSRHFMPTSFIMNFLDVLAVHKLNRLHLHLTDDQ GWRLPVPGWPRLTTVGAWRPGTVRGHQPPPDDNGCDDVAEHDHIPHGGAYTVDQLRAIDE RAQLLGITVVPEVDLPGHTESVVAAYPELGCGAPISHPRTAFGVSEHHINLTDAALGFCR DVLDAVMEIFPNSPIHIGGDECPGKEWFGHKPTRTRLAELGITTPHQAQAWFERQICGHV VAAGRQVIAWDEVLEAGAPEEVTVMVWRDADDIARAAAAGHDVIAAPARHTYLDHGMETG PQAPVTIDAPMTMNDVAGLHDVLAAVNSPHLLGGQFQLWTEYLCTPAQVEDAAFPRGTSI AEQLWTGNPARPLSELEAQTRRLTAMGVNWHR >gi|302034478|gb|GL383157.1| GENE 167 163822 - 164757 554 311 aa, chain + ## HITS:1 COG:AGl468 KEGG:ns NR:ns ## COG: AGl468 COG0524 # Protein_GI_number: 15890341 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 256 23 285 319 73 29.0 5e-13 MSVNRHPRLLTAGITFRDLVISGIDELPGLGEERYGTDFVTTWGGVANTARIGASLGARV QLLTGLGDDPNSEMCRRELTEWGIDLTPSPINPGWTLPVTMSQACGTERAMTTVETALPA PLPAPNLDGVDVIVTHVSVPADAWLHDAADAGIPVIADHGFEEGYEPGLLDAVSGCTCYT PNAAEAMHLTGVDDPVRAARALAERVPVVVVTCGGDGIVGVDSRTGEEVHVPAVNINPVN TTGAGDAALAGLAWCWGWQVPLARKLDVAALVGAIVTSRVHGTAGPLTPEDVLAWVPRAP ERLGFLPELLG >gi|302034478|gb|GL383157.1| GENE 168 164776 - 166146 1048 456 aa, chain - ## HITS:1 COG:BS_yfiJ KEGG:ns NR:ns ## COG: BS_yfiJ COG4585 # Protein_GI_number: 16077896 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Bacillus subtilis # 111 447 48 381 400 105 27.0 2e-22 MEDTGSQTLPTENRSTGSRGAGVRARLNRFNPSRNNVPQINIPGMEEVLDPKLDDGRPAD TERAWWGDVTLTLIMAVVTIAPYLVSLVEWPRPEYIAALLSSMVMVASLPMRREHPLLMM TLVAIGAAIQFFFVPFPVLSIFVVPIASYSVARWVDGHQSRWVLWVGAVGSVIGPMRWIP TIAAGYDPSSGTPWVLLVLAMTVCAGLVLTPYAVGRRLRESALIDSQQRIVKAQRYRAIL AEREQQARVAEERTRNEIARELHDIVAHSLSVMIVQAEGGKALATKKPEKAPEVLETIAE TGREALLEMRRIVGVLRQDTDAEFSPSPSLAEIPDLVDKSGVKVELKVTGEEPVVSQALG LVIYRVVQEALTNVLKHAGPSAHATVTLAYSPTAIYVEILDDGYGAAVQGDGRGHGLQGM RERVTSMGGQLSAGPRKEGGFRVMAKLPVQADSRQR >gi|302034478|gb|GL383157.1| GENE 169 166326 - 167315 1008 329 aa, chain + ## HITS:1 COG:BS_galE KEGG:ns NR:ns ## COG: BS_galE COG1087 # Protein_GI_number: 16080937 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose 4-epimerase # Organism: Bacillus subtilis # 1 319 1 327 339 241 42.0 2e-63 MKILITGGAGYIGSTVGSACEEAGHEVVVLDDLSAGRREFVRDRTFYEGDIADQDLLDRV FSENQIDAVVHCAAKIIVPESVDEPLTYYGNNVGKTVALLKGMERNGVHRILFSSSASIY ATDEESKVTEESALDPGSPYATTKFMVEFILRDAAHASDLKALSLRYFNPIGSDPKLRTG QQIEHPTHVLGKMIDAWMEGSTFTVTGVDWPTRDGSGIRDYIHVWDLARAHVAALEHLDE VTTDDPYQVFNIGTGSGVTVKELVKAFEEGTGKSLNVVYGPPRPGDVAGAYTVSRRAKDL LGWSAELTQADGIRDAIAWLPERKKILGY >gi|302034478|gb|GL383157.1| GENE 170 167388 - 168020 621 210 aa, chain - ## HITS:1 COG:no KEGG:PPA0070 NR:ns ## KEGG: PPA0070 # Name: not_defined # Def: transcriptional regulator # Organism: P.acnes # Pathway: not_defined # 1 210 62 271 271 389 100.0 1e-107 MTTTSDTPPISARRAATQARLADAAVAVFARKGVPGSTVEEICEEAGFTRGAFYSNFTSK DDLCTTVLRRYAEKNLATLGSSLDFPNDGHEALRDRIHGIIALFASTVGSDPLTAMAILE ITIEAARNPRLRQAYRQVGDAITPALCHMVEQALREHAATATIAVSDLVEVTQAVFDFRV LAAMASGRQADIDRMTNQLTMMVLTFVHPM >gi|302034478|gb|GL383157.1| GENE 171 168140 - 170869 2088 909 aa, chain + ## HITS:1 COG:BS_ydfJ KEGG:ns NR:ns ## COG: BS_ydfJ COG2409 # Protein_GI_number: 16077610 # Func_class: R General function prediction only # Function: Predicted drug exporters of the RND superfamily # Organism: Bacillus subtilis # 1 740 1 718 724 462 38.0 1e-129 MSSLLHDLGVWCFRRAKTVVALWLVLLALLGVGVAALHGDYDDFFTIPGAPSQVAYDKLQ VAFPQASALSANVVVTVPDGTNISSKLIRSRIEKGVDELKDLPLVTGATSPWNKYVTGMV NKDHTAAVIQVELGQNNAVTFPDSGRHDLIRVGNEIQSDLPSGSHVYVGGQAFEATLPSL SITEVIGVGVALVVLSVTLGSLVAAGMPIVTAVLGVGVTYSGMAILTRFTTVNSVTPMLA VMLGLAVGIDYALFILSRHRDQLRDGAEVQESAARAVATSGSAVVFAGATVVIALIGLSI ARIPFLTVMGIFAAIGVALAVVIALTMLPAFMGLMGERLRPRRSRADTKARTAGEKERSG GIFGWWVRTVTRVPLVTILVVVVGLGALAVPMKDLHLSLPTAAELPASNTARQTYDVLEQ KFGPGFNGPVIVTADVVSSHDPMRIVNGLKADIEKIPGVDTVALAVPNRNADSAMIQVLP TTGPADEATNNLVRTLRDHETQWRDTYGVDTAVTGLTAIKLDVSQRLGAALLPFGIFVVG LCLVLLTLVFRSIAVPIKATVGYLLSVLAAFGVSQLVFNRGIGLQVVNLDRLVPIISFMP IVVMGILFGLAMDYEVFLVSRMREEYVHTGDAKGAVTRGFIGSGKVVTAAAVIMISVFVF FIPEGMNAIKEIALALAVGILTDAFLVRMTLVPAVMALLGDKAWWLPGWLDRRLPRLDIE GEGIAHEEKLAAWPTADHTEALHAEGIGVEGLFEGLDLHVEPRQVQAVVGSQNSVSAVLL AIGGRLPLDHGRMRSGGLLLPERASRVRRVTWFLDASAPDFVDELRSAMTVLTHLPRRPS KRPRLFLIDHADRIVDPITRDLLESLVREAGEAAVILGAQRRGRIDWLSPQIIHNLAEHH FESSSGGTR >gi|302034478|gb|GL383157.1| GENE 172 170869 - 173235 1812 788 aa, chain + ## HITS:1 COG:lin2460 KEGG:ns NR:ns ## COG: lin2460 COG1511 # Protein_GI_number: 16801522 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 15 573 20 612 927 153 27.0 2e-36 MTERSHSTIRLRWPAVVVLVLVPLLVVAGLVGTTWHTTDRLGRVKAAVVNEDKAVKVRGQ LVPMGRQLTAALMDSGSHTTDGHTVDWTLTDAQGAAEGLRDGTYSVVVTIPESFSADATS FSANDVNKAKQALIDVTASQNSPVTDTTIAELTAQVARRSLNTTLTSKYLENVYVGFNRF AEQMARMAGAAAKLDDGATKLADGTKRSSAGAATLASGMTKLSGGAQRLSANGGKLTDGV SQLSGGLTTLSHKGQQLSQGADGLASGVATYTDGTGKVVDGIGQLSAGLTTMDEKIAAAT GKIDPSQLDKLAGGAGQLADGIDQFTGNLVGYRTEIRQYASGKKTAELSKEALSRGEADF LRRCMRSHTAQECHDLVPIVRDAMTDGYALGVRAGSGVAVKAMAIKDPNSGKSIDDGIDE LADGSSRLSRGVNEFTTQLRTCLPKMVRQVTRLHEGIHQAATGAQALASRSQQLKAGGVK LSSGAATLAHGVDAYTAGVSKAAGSTPKLQNGVNQYVDGVDRLSDGLAKAATGAGTFASG MTKLDSGARKLTKGTGVFSSQLAAGAKKVPTYSQNDRTKLADVVSAPVNGDGPAIATSVA VVAVLLVLGAWIAALATWLVARTVPSGALTSSRSTLGLLARTMSVGAVVSVAVSGGLAVI GGTALGLSVPRSIGLGSLLLLVGVMFGLVNHSLAAWLHGLGRLISVVLVTATVAAGLAST VPAPVRWADAVSPLNPALRAVQAVVAGQNPAFGSLVAVVAWAVVALVASMGAVGRRRQTS AKALLGSG >gi|302034478|gb|GL383157.1| GENE 173 173421 - 174866 967 481 aa, chain - ## HITS:1 COG:no KEGG:PPA0073 NR:ns ## KEGG: PPA0073 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 481 1 481 481 756 99.0 0 MTMTPPIEPGTADQRIPSLTVPEPLGATPGRLTTAAILSMTLRASAADHSTWRLPVVAFA VIATIILDVTGGAVMMWHLPGDNSGFYKLTSTIAVILLVLPLMTLAASAARLSARRRDDR LSSLRLVGASSHLLRVVALTEAGLQALVGSILGITGYVLCLPLLGQLSFNGGKVGADSIL LRPIPVAGVILTLVLLALVSSAIGLRTVDVSPLGVRMRSQPRSVSWVRLAIGGAIVLLIV FSKAVLGFLGHQTGMVGVYVFIAVILAAVVELANIIGPKLLAMYFQHRLQRAKDATDLVA ARQVLENPRAAWTQVASLGAVCVVGMLGGTGAAMMQTINNDPPATKSARIVGGDLQTGVI LLIIFAFATVACSVGVNQASAILDRRSVEVGLDVVGMDLQTQDKVRRITVISPMRFAMVT GIIATGLLLVPATGIALITRPATVLVTVATIVAGAGMVRLGLWATRPTLRRVIDDGLART E >gi|302034478|gb|GL383157.1| GENE 174 174869 - 175621 275 250 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 28 239 9 218 245 110 33 1e-22 MLTTTRPHPRAADTTIRGAHLRALGLTKTYGMTRALDHIDIAIPAGQSVAVMGPSGSGKT TLLHCLSGILSPDSGSIELALPDRTVNVENLSNEGRAKLRRQSLGFVFQQGMLVPELTAV ENTALPLMLNGVSRTDAVRYATQWLESMGLGGMEDRRIGQLSGGQAQRVAIARSQVIDPS IVFADEPTGALDSATAIEVMAILLSATTGRGRTLVVVTHDEDVARRCQRILHLHDGRIVS DDVRHSDGRW >gi|302034478|gb|GL383157.1| GENE 175 175836 - 176705 443 289 aa, chain + ## HITS:1 COG:MA1360 KEGG:ns NR:ns ## COG: MA1360 COG0500 # Protein_GI_number: 20090221 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Methanosarcina acetivorans str.C2A # 48 191 36 176 281 75 34.0 9e-14 MGAGGYIGHRGRYRLRGQAMQGGGMEIIDYFGLWEHDRSCDPQRRTLEEEREFWRCYARV YDQHAGETGGSLAQIAAVTEIVEPGSSVLDVGGGTGRFAIPLAQRGCRVTVLDRSEDMLS VLESSAEEKDVEIDVVHQEWPADLGCQFDSVMAAWSLYWNLDLQASLQAMVRQTKKHLII IDTTGSPTVWDHALAVARGGGIVASQARHLLFAGGLAQLGIPAEIRVLEEYRVIGETELE REIDAHGGSKVAAMEYLDTHAVRIRSGWRYKRTVGLIHAQGKNIPARNL >gi|302034478|gb|GL383157.1| GENE 176 176926 - 177954 894 342 aa, chain + ## HITS:1 COG:FN0885 KEGG:ns NR:ns ## COG: FN0885 COG0614 # Protein_GI_number: 19704220 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Fusobacterium nucleatum # 68 330 20 276 286 160 37.0 4e-39 MVRKRVRMTALIAAMAMPIFSLVGCGSAVTDPSISKASTATLPVMQGHTSYPLTVTSCGV SQVFESAPKRAVTLTSTATETMLELGLEKRMAGTAYQRNRPIGSQYKKAYDSIPILASGQ PSMEKLLSVNPDFVYSGYPDGFSKSNGHTREDLKKLGIKTHLSPVGCSDQVKTLEDETKE IRTIGQIFDVNDKAEKAVRRFNSKVSSVKNSVKGKDRPKVFLYNSGIEAPITVGGWAYAS VMIDAAGGENIFAHEPLRWGKMSWEQVAKADPDMILIYDYKTPSVDQKIKTLKSIPALKD TKAVKNNAFPVISLSLAQPGPRSAESIEQLLNSSIADARCAQ >gi|302034478|gb|GL383157.1| GENE 177 177935 - 179104 618 389 aa, chain + ## HITS:1 COG:FN0884 KEGG:ns NR:ns ## COG: FN0884 COG0609 # Protein_GI_number: 19704219 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Fusobacterium nucleatum # 67 385 26 341 345 213 38.0 4e-55 MLGAHSEGDDTSVRSVSDQGDLVAILNRVPARSLEDVTSYQSDLRRGRSVVLILVFVTVL LFVLGTALSIGSVQVPFTMVWKVVAHRVFPEGVISVEWTPAIDRIVADTRLPRVLLAAVA GMALTTVGTVVQALLRNPLANPTILGVSSGAATGAIAVMRFGLLIGGTVSLGLAAFGGAF LTLLLVIMVARQRQTMTAGTLILTGTAVSALLSAVNNFMVLTSPDPQLASQVLFWSLGGF GAAKWENLLFPSGVLAIGIILCLAQASNLNILLAGEESAGSLGLNVNRFRTWMFAVAAAI VGVTVAVCGVVGFIGLVMPHITRLCVGADHRRTLPIGLLLGAIFTVLADLGARMVIRPQE LPVGIVTALVGAPFFLFLLRRNGGRRKDD >gi|302034478|gb|GL383157.1| GENE 178 179097 - 179864 179 255 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225088774|ref|YP_002660041.1| ribosomal protein S16 [gamma proteobacterium NOR5-3] # 7 218 12 222 312 73 28 2e-11 MIKGAKLVVDNLGVDIDGHCIVDGVNFCARPGDVVGILGPNGSDKSTILRSIFHSRKPAR GSVTLDGVDVWSRDAKWSAQHICVVLQETPAEFPLTCGEIVRMGRAPHKRSWQSLGAGDL ELCHAAMEVMEVDNLAGSSFSRISGGERQRVTIARALAQQTGMIVMDEPTNHLDIHHQLK LMHLLRRLNATTVIALHDINLAGRFCDTLVLMSGGSCVACGAPSTVLSPNVLDDVYHVKT DVVRQPNGTVHVTIL >gi|302034478|gb|GL383157.1| GENE 179 179947 - 181404 1495 485 aa, chain + ## HITS:1 COG:Cgl0050 KEGG:ns NR:ns ## COG: Cgl0050 COG1012 # Protein_GI_number: 19551300 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Corynebacterium glutamicum # 1 483 1 484 490 537 60.0 1e-152 MMTNDRSLPSDLPTQLLIDGEWVDAEASRTFDVINPATEKPLVAIADASVDQGTDALDAA VRAQHSWADTAPRERAEILRKTFNLVTERKDDFARLMTLEMGKPLAESYGEVTYGSEFLR WFSEEAVRIRGDYGLLPEGNIRQLVTKRPVGPCLFITPWNFPLAMATRKIAPALAAGCTV VIRPASATPLTTLLLAKTFLEAGLPAGVLNVITGLDHAVTDAILEDPRLRKLSFTGSTGV GANLLGKAAKHVLRTSMELGGNAPFIVFDDADLDQAIIGAKGAKMRNMGEVCIAANRFIV HESVAEEFTDKMIEMMSGLVVGDGLDEKSEVGPMITERDREKVDGLVRSAIEAGATLRCG GEIPEDKGWFYPPTVLSGVPADAEIMQTEIFGPVAPITTFRTEEEALALANSVPVGLAGY VFTSDTARILRMGQKLETGMIGANLGVFSNAAAPFGGVKESGLGREGSYQGIEEFLETIY VALPA >gi|302034478|gb|GL383157.1| GENE 180 181449 - 182735 705 428 aa, chain + ## HITS:1 COG:NMB0982 KEGG:ns NR:ns ## COG: NMB0982 COG0038 # Protein_GI_number: 15676874 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Neisseria meningitidis MC58 # 31 384 2 355 380 100 30.0 4e-21 MVTSRIRFVAAVVLTGLASGLIGGLTSELSHLIEVCAFGVPFSSSTTGVGEVVMWRRLVA PIMGALIAGLTWRWLRPFPSGSITSVRQAIDSPTRLRPVETIVDALAQLVVVGSGSSLGR EAAPRQMAALAAQGLSDTFRVDVATRRVVLASAAGAGLASVYNVPVAGALYALELTVRPD LRTKRGWGQVGIAGVISVLSTVTAWLLNHDRPIYRSPAATVTGPGLGWMVLVVAVSTVVG AGMGVLFGEMKRRVPVTSRLWWTVPLGSAGVTAIALAAPQVVGNGQVIVNLVLAHPVAPA SLVILLVGKILATTVALRSGAAGGLLTPSLSAGALVGALVAVVAGIDAPSQIAMMVIVGA GCVLSMTQRAPLFAAAFALELTRAGALGIPVVVAAVMLGWTGFVLVSRRGLGLHGRIGRA PGHTSDPR >gi|302034478|gb|GL383157.1| GENE 181 182790 - 185156 2687 788 aa, chain + ## HITS:1 COG:Cgl1277 KEGG:ns NR:ns ## COG: Cgl1277 COG0058 # Protein_GI_number: 19552527 # Func_class: G Carbohydrate transport and metabolism # Function: Glucan phosphorylase # Organism: Corynebacterium glutamicum # 6 787 9 792 795 1048 65.0 0 MTQDLASAIAFQVRSTSGRSVTASTPMEVWQGLSACVVGRIADDWQATDAAYKAERQEHY FSAEFLMGRALLNNLSNLGLVNETREALASFGIDLSEVLEQEPDAALGNGGLGRLAACFL DSCATLELPVTGYGILYRYGLFKQLFDNGFQTEHPDPWMEEGYPFVIRREEQQRIVRYAD MWVRAIPHDMPITGYGTRNVGTLRLWKAEPMEQFDYQAFNSQRFTDAIVERERTSDISRV LYPNDTTFEGKVLRVRQQYFFCSASLQEIVDNYIEHHGEDLTGFAKYNSIQLNDTHPVLS IPELMRILLDEHGMGWDEAWEVVTHTFAYTNHTVLAEALEKWEMQIFDRLFPRISEIVRE IDRRFREDMNKRGVDGQTIEYMAPVSGNQVRMAWIACYASYSINGVAALHTEIIKRETLK EWHAIWPQRFNNKTNGVTPRRWLNQCNPRLASLLSEVTGSDTWVKDLSVLANYTDSVDES VYDRINEIKHANKVDFAAWVAEREGVKIDPDAIFDVQIKRLHEYKRQLLNAFYVLDLYFR IKDDPSLNVPKRVFVFGAKAAPGYIRAKAIIKFINEVARLVNNDEDINGRIKVVFIHNYN VSPAEHIIPAADVSEQISMAGKEASGTSNMKFMMNGALTLGTLDGANVEILDAVGDDNAY IFGATEEQLPSLKRDYDPRWHYENVPGLKRVIDTLTDGTLDDNGSGWFHDLRQSLMEPGW EVPDVYYVLGDFASYRDVKDKMAADHADARGWARKAWVNVTKSGRFSSDRTIRDYAEQVW KLEPVRAE >gi|302034478|gb|GL383157.1| GENE 182 185221 - 185613 468 130 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3082 NR:ns ## KEGG: HMPREF0675_3082 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 130 1 130 130 195 100.0 6e-49 MAVTMRIVAALLVIAAVWGGKYVVSLIFRAAGVRAGGDTGLLRGGLWIGYLERLGIVIAI LTSYPAGIAVILGVKTLARYAELKSQPTPGSDAAQANKESSAAIEQFIIGTMASALWSVL LTVTAKALWG >gi|302034478|gb|GL383157.1| GENE 183 185598 - 186233 364 211 aa, chain - ## HITS:1 COG:no KEGG:PPA0082 NR:ns ## KEGG: PPA0082 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 211 1 211 211 382 100.0 1e-105 MLAWVILADQVDSRRHNDEVPHLLTALTSPGLLVSPTGYTVGTPQWVLPPERTSGDEVQA LTTDPASLIHAVWTSGSGPWRIGVSHGEVDTPLPDSTRAARGPAYISAREAIDECRRRRA AIHVFADGTDGMRRFSQVAQVVVDLARRLRPAARDVAKFYDLSMSSDETARALGISTSAV SQRLTRARWEYLVGIRQLAVDLAQEAQWPSP >gi|302034478|gb|GL383157.1| GENE 184 186168 - 186506 133 112 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGDLVVVASTVDLVGKNDPGEHGALLPVVLWSAVVGLENNLNCAPVKGRALCGCLGASVW WLSNGLALLLSDREDSKAKLSLGGFSLGCPGGEVRGRTTGALRLPCALRGPS >gi|302034478|gb|GL383157.1| GENE 185 186421 - 188637 1606 738 aa, chain - ## HITS:1 COG:no KEGG:PPA0083 NR:ns ## KEGG: PPA0083 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 738 1 738 738 1437 99.0 0 MSSSTSQTTSRAGRLTLPVEKGMDAQVAELLERLQADAVRNSDGTELPEIVNKLATKIYQ TYFVGRGDQDWAQTHPRELTRIYLMSERTPALADGELSIDLMTNWFVDQVYPDTDCDVER WWQVIDRTTGDVIAPGAWHVDPADLSVTMDQAQAGHVYTVGFLAVQRWDPTQMYNYLTNG WADDPQRIKESPYDIRYPQTWQHVRHALDQWLADNPQVDVVRFTTFFYHFTLVYGSDGTE RFVDWFGYSASVSVPAMEAFEKRFGYPLQAEDFIDEGWYNSPFRVPRKSFRDWVSFQHEF VTSRMAELVEQVHAAGREAMMFLGDNWIGTEPYGPHFAHTGIDAVVGSVGSGATCRMISN IPGVRYTEGRLLPYFFPDVFYPGGDPVTEANASWLAARRAIVRSPLDRIGYGGYLSLAVQ HPEFVDRMEEIVNEFRAIHAAAAGQRPIATGPRVAIVNCWGALRSWQTHMVAHALHYRQA YSYLGVLESLSGLPLQVDFLSFDDIRNGVPEGVEVLINVGAAGTAFSGGSEWADERVTSA VRRFVAAGGGLVGVGDPTAHPARGAVYQLSDVLGVDRELGWGLSTHRPMHTSDHHFVTLD LSSRLDVGEGTPDVFCASATTTVLAAHHEQVDLAVNQFGCGRAVYLAGLPYSSQNARLLH RALAWAGHREDAFTTWTSSDVRAEVAVYPHSDRLLVINNSLDQVTTTVSTPTTVREVHME AAGHLWFDLELHPLDIPG >gi|302034478|gb|GL383157.1| GENE 186 188767 - 189978 476 403 aa, chain - ## HITS:1 COG:BH2758 KEGG:ns NR:ns ## COG: BH2758 COG1940 # Protein_GI_number: 15615321 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Bacillus halodurans # 4 340 2 326 386 133 30.0 5e-31 MHSAVVGAERIDHGTMRTINLALLLGALRSGPISRAELSRRTHLSKASITSLAAELAARG LVREGSPDRNGTVGRPGTMLTLEGARVCGVGLEINAEYLAVCVVDLCGTVLYDRAQPFDV ASLPISDVLDEVAGIMRDTLEQLHSARRHVAQVMVSAPGVIKQPAGTVHLASNLGWRDVP LRSQLLQRLDADISLQVENDAKLAAVAEYRRYEDSDVRDLVYLSGDIGVGAGIIAAGQLM RGWSGFSGEVGHLHLDPRNLPCHCGRTGCWEARVGLPEFLAHTGDRLGAQPIDRLLTQIQ DRATRGDQQVLNALDDLATSLAEGLSVVIDMLNPRVVVLGGYFSWFTDFLIPPIAADLTA RRLDPGAGALLAGAQLGMVSSAHGAALTALDSVFVNPLSVPQC >gi|302034478|gb|GL383157.1| GENE 187 190335 - 191678 1155 447 aa, chain + ## HITS:1 COG:mlr7000 KEGG:ns NR:ns ## COG: mlr7000 COG1653 # Protein_GI_number: 13475830 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Mesorhizobium loti # 1 355 1 327 414 64 26.0 4e-10 MQLTRRALMVGLAASAATVPLAACSPGSRTTASTSGGAGKASGVIKVAAFENAYGAAIYK QVAEAFEKATGAKVEFTVSKTIDQELTPQVAAGNFPDVVFMGVGGKTGFTDKFVQNKSLE PLNDILKITNKGETTTVGDKLLPGMVGNLTTNPYDDDRLMLAPTFMAPAGLVYNKTLFKK NGWTLPATWDEFFALGDEFKAKGVSLFTYPTAGYFDTFFFALLSSIGGDDYFKKVMSYEK NIWTGSEATQALNLVGKLLTQYTLPQMVGYANNQDYTKNQAALMADKALFCPDGSWVAGE MKDAPRSAGFAWGLTTVPAMKKEDRHLTSFIESVWIPSGAKNKASAKTFIAWLYSDKATG LFAKAGAAMPTKTGTKGLPAEVAPFYTVYDEPGLKSTIGGFKSAKAVPGIDMKTALLDSV DSVASGKLSVKDWQAKVNEASNKLGGH >gi|302034478|gb|GL383157.1| GENE 188 191779 - 192657 787 292 aa, chain + ## HITS:1 COG:BS_yurN KEGG:ns NR:ns ## COG: BS_yurN COG1175 # Protein_GI_number: 16080312 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Bacillus subtilis # 10 280 11 281 292 157 35.0 3e-38 MGGGGPFAALCILPALVLYVLFLVYPTLNVFRMSLFDWNGLGNAPSFIGLDNFAALIHDP AFVRAFENTLFILVVVTIVTICSSIFIAAVLTRETLVGAGWYRFVLYLPSVLSIVVVAAI FSAVFDQNNGLVNGLLQALGLGHGPVWLGDQNVVMYSVAIAMVWQSLGYYVVLYMAGMSS VPVEIYESASLDGAGRMTQLGSITIPLIWSNIRTTLTFFVLSSVNLAFVLVKALTDGGPN GSSEVLLNYMYKQAFTNSAYGYGMAIGVVTFLFSFLVAMLISHVTRREVLQY >gi|302034478|gb|GL383157.1| GENE 189 192657 - 193538 812 293 aa, chain + ## HITS:1 COG:BS_yurM KEGG:ns NR:ns ## COG: BS_yurM COG0395 # Protein_GI_number: 16080311 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Bacillus subtilis # 21 293 40 299 300 125 31.0 1e-28 MSAVPTPSRADRRYRLAAHALLVIISILIIVPVAWVVMAAFKTKPEFFGSPWRLPDGLHW QNFVDAFVTAKMGIYFTDSLFVTVLGLVFSLSVAIPAAYAIARVPFRGRALVEGFLMAGL FINVNYIVVPIFLMLLGWDQALASWLPNGFFIDNLAVLALVYAATSLPFTVYLLVSFFRT IPAIYEEAAALDGSSRLRTMLSIMVPIARPAISTVILFNFLSFWNDFIISLTLIPGEHKT LQVGLLNLFQAQRAAADYGRLYAGMVIVMVPVLLLYATIQKRLVTGIGGGGLK >gi|302034478|gb|GL383157.1| GENE 190 193555 - 193731 174 58 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|289424703|ref|ZP_06426486.1| ## NR: gi|289424703|ref|ZP_06426486.1| hypothetical protein HMPREF1034_1734 [Propionibacterium acnes SK187] hypothetical protein HMPREF1034_1734 [Propionibacterium acnes SK187] hypothetical protein PAZ_c00930 [Propionibacterium acnes 266] # 1 58 1 58 58 74 100.0 2e-12 MSDKMSQVFGWLAFALVLGACVVVMVAMRTTGWVQAGIMALALGVVIAVLGVYNRRYV >gi|302034478|gb|GL383157.1| GENE 191 193733 - 194797 593 354 aa, chain + ## HITS:1 COG:TM1200 KEGG:ns NR:ns ## COG: TM1200 COG1609 # Protein_GI_number: 15643956 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Thermotoga maritima # 16 347 7 332 333 145 31.0 1e-34 MSASGFSPPLTGRAPTMADVAKRADVSPQTVSRVVRGQTNVSEVTRLKVELAIDELGYRR TGIARALVTGHTMTLGVLTQSSVAYSRAAYVAAMTSAARRHGYYVAAASVTSTVSEAVCQ SIEHLRQQGVDGIVVAVPVYDVEALAQAARGLPAVVFGGSSSEAVPDGFSDGTGHHAVCI DQERIGVLATEHLLELGHDTVWHVAGPSTWADASGRQAGWAATLAKHGRPEPPVLIGDWS AESGWRLGTLLARMEEVTAIFAASDDMAFGILRALVDRGRRVPEDVSVVGADDVPLAAFA PVALTTVRQSFQDLGTAAIDLLVDMVERPDREHHGVLMEPELVLRSSTAPRHAG >gi|302034478|gb|GL383157.1| GENE 192 194787 - 195440 232 217 aa, chain + ## HITS:1 COG:no KEGG:PPA0089 NR:ns ## KEGG: PPA0089 # Name: not_defined # Def: glycosyl hydrolase family protein # Organism: P.acnes # Pathway: not_defined # 1 201 1 201 729 396 98.0 1e-109 MLAESWRLHYRSPAAKWEAYGLPIGNGRLGAVLRGDIARDVVQFNENSLWAGSNNYDNGL CGVADDVFDTSMHGFGRYLDFGRVTISFADLDESTVSGYERALDLRHAVAYACFDAGGVR HQRSAFASREADVIVLRYSASAPFGCTVRLESAQGVPSRVAGDTSVVFDGVLGNGLRYCA SLVLLECDGRSIAYGDRIVVEARRHWRSSLTPVPTTR >gi|302034478|gb|GL383157.1| GENE 193 195563 - 196975 611 470 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3092 NR:ns ## KEGG: HMPREF0675_3092 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 470 260 729 729 944 98.0 0 MDRCRLRWGRPVPELDAQPTDVRLRRYRDGAADVGLEQLAVVLGRYLLVSSSRAEGLPAN LQGLWNDSNDPAWGSDYHTNINVQMNYWGAEVTGLGEEHMALLNFVGEVAVPSRSATRAM CGPDVPGWTARTSQSPLGGNGWQPNTVASAWYAHHVYEHWAFTRDDEWLRTRGLPMLAEI CRFWEHQLVERDDGMIVTPAGWSPEHGPREDGVAYDQQIVWDLFTNLLECSRALGVEDDL YYRVERLRDRLAPNQVGCWGQLQEWQDDRDDPTELHRHTSHLFAVYPGRQITTDTPELQA AALVSLKARCGEPPPVAGAPTVAPFRAEMVVGDSRRSWTWPWRAALFARLGDGYRAGEMV RGLLTYNMLPNLWTTHPPFQVDGNLGLVGAVAEMLLQSHDGRIRLLPALPPAWEAEGEAI GLRARGGYRVSMQWCDGQVIWFEIVADRGHAEDVIVVVNGREHRIRPDKR >gi|302034478|gb|GL383157.1| GENE 194 197335 - 198462 1144 375 aa, chain + ## HITS:1 COG:MT3090 KEGG:ns NR:ns ## COG: MT3090 COG0205 # Protein_GI_number: 15842568 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphofructokinase # Organism: Mycobacterium tuberculosis CDC1551 # 6 357 2 331 343 233 40.0 5e-61 MSKKKKVGILTAGGDCPGLNAAIRGFGKAAIRQHDMELIGIQDGFLGLAGNRTISLDPRA LSGILTVGGTILGTSRDKVNHMIIDGEERDMVPTIVENYEKLGLDALVTLGGGGTAKNAY KLAKAGLNVLHLPKTIDNDIVGTDDSFGFSTALEIATEAIDRLHSTAHSHHRIILAEIMG HRAGWLALGSGIAGGADVILLPEVPYKLDSIVQAVENRQKQGLNFSVIAVAEGARDEADS AAMAGAQALVDASKTSETKAAAKKAKKDLEHSMRDNTLKLATQLEEATGLESRVSILGYV QRGGIPCAHDRLLATRLGTVGAKLVDDGEFGIMVAAQGGDATTVPLKDVAGKVKYVPADH PWVKAARQVGTGLGD >gi|302034478|gb|GL383157.1| GENE 195 198500 - 199081 295 193 aa, chain - ## HITS:1 COG:MT2696 KEGG:ns NR:ns ## COG: MT2696 COG2345 # Protein_GI_number: 15842161 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Mycobacterium tuberculosis CDC1551 # 37 182 34 201 224 90 38.0 2e-18 MSTRHDDTASLVDPGSQKRIDEVADALRRRGGSATSAELASDLGIHPSTARFHLDRLVEQ RRVEATRRHRATRGRPHTVFTLVSDEGPRAYRLLAQMLVDEVAISNNPTAMAMRIGQRWG RHRRGDLIAVLDDMGFSPAAEEGGIVLRHCPFLDLARDHPQVVCSLHCGVVEGVTGQAAT IDANPGVRCVVHT >gi|302034478|gb|GL383157.1| GENE 196 199078 - 201819 1761 913 aa, chain - ## HITS:1 COG:NMB1623 KEGG:ns NR:ns ## COG: NMB1623 COG2132 # Protein_GI_number: 15677473 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Putative multicopper oxidases # Organism: Neisseria meningitidis MC58 # 672 911 102 345 390 133 34.0 1e-30 MPEITSAPVGRKPDTNKRSWHRKASRPVSGWLVALLIVAVANPWIPQSRWLLVHMVTLGV ATTSIMVWGQYFTEAILHNNLTDTDRSRQVLRIRLLAVGIVITCIGMVVTWPWITVTGAA VIGSTLTWYAFALGHQVRHALPGRFDSTVWFYCAAACLLPLGATLGAIMAFSPTEPWRTR LLVAHQALNLLGFVGLTVVGTLITLWPTVLRTKMQPAQDRHGKISLCVMFVAVAATTTGA LCGLWWLAALGVTAHIVGICIVLGDLVACSVHRPPRDFPGFTMGAAICWMLVWLVWLAWK LASNGTRLLADDIFTLSVPVIVGFLLQLLIGAMSYLMPMVMGGGPKIVRATNAKMHAYGA LRATITNAGLLLWVLAMGTWTRRIGMVLTVVGLATFLPATAAMVRTGVPMLKEKGCQMAA RKAASEIGEAPDPDNGPAQAAPVASLDRSATSKPAEPAPTAPPNRRSFVGAFAGLATALT AAAVGHHLDQTTPTDDTNGSAAVVGHVAPTGHTTTVNITAKGMKYHPSTITVPAGDQLVV EITNKDPNQVHDLQFANGAHSPRLAPGDHATVKVGVITGPTEGWCTIVGHKSMGMVLDVQ VAGMSGVHDRDDHVDSADPRRRIDLTKAPGKDFRTRDAVLPPLMTGRVHRMTLIAQESVQ EIAPETTIDAMTYNGHYMAPVIHARIGDEMRVHLVNRGTMGHSLDFHAGTVSPTKVMRTI APGQELDYNFTLHRAGIWLYHCSTAPMSAHIAAGMFGAVIVPPHDLPPADREFYLVQSET YLSEHNEAEVNTAKIANETPDLTMFNGHANQYVFEPLKARVGERVRIWVLAAGPSRGCSF HVVGTQFDTVFKEGAYTLKRGNPEGGGCQALDLASAQGGFVEMVFEEPGRYTFVNHSFVE MERGAKGFIEVTT >gi|302034478|gb|GL383157.1| GENE 197 201812 - 202945 820 377 aa, chain - ## HITS:1 COG:no KEGG:PPA0093 NR:ns ## KEGG: PPA0093 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 377 1 377 377 549 99.0 1e-155 MPTSSAGSHRAWLMVGAGISLLAGLDGALLLLGVWSPVMSTRLSKWHGPLMVLGFVGTVI CLERAVALGHRLAYLVPAMSGFGVIVLLAPLPFDSARAGLALLTLAQLGLLTIYVPLWRR SHDDAVVIQGAGAFCAAGAAALLTTGAHVSQIVGWLACYMILTICGERLELSRLTMARNR ALSALCLAVVAALLVSVVSPAIGWRVLGVVLIGLAVWLCRHDVARGGLRRGGQAAYIGTL LMIGYLWLATAGIVCTIQRPPTSRNGYDAVVHSLFLGFTMGMILGHAPIILPAVLQVRLE WTTWFWLPAFLLEASLLVRIGIGDGLDRSAAVQAGGTVNVLSLLTLVAVIATHIQPRTRA RTHLKSTPRSRSGEDHA >gi|302034478|gb|GL383157.1| GENE 198 203375 - 204847 1238 490 aa, chain + ## HITS:1 COG:VC2698 KEGG:ns NR:ns ## COG: VC2698 COG1027 # Protein_GI_number: 15642693 # Func_class: E Amino acid transport and metabolism # Function: Aspartate ammonia-lyase # Organism: Vibrio cholerae # 5 472 16 483 483 622 64.0 1e-178 MTEIRIEEDLLGKREISNEHYYGIHTLRALENFQISRGCMNDEPDFIRGMVQVKKATALT NKQLKVLPSDVADAIVAACDAILDDGRCMDQFPTDSFQGGAGTSINMNTNEVVANLALEM LGYPKGTYDVIHPNDDVNKSQSTNDAYPTGFRLGVYALLEGLKRAVADLADSFDAKAEEF ADVLKMGRTQLQDAVPMTLGEEFDGYAHNIRAELDRLDIGSDLLVEVNLGGTAIGTRINT PDGYAELAAEKLAEVTGYPIRPSTNLMESSYDNGAYIAVHSIIKRLAAKISKICNDLRLL SSGPRAGLKEINLPEMQAGSSIMPAKVNPVIPEVVNQICFKVFGNDVTVCFAAEAGQLEL NVMEPALSQAMFESIHLLTNACDTLRGKCIDGITANVERCREYVTNSIGIVTYLNDVIGH HQGDLIGEEAARTGKSVREVVLEHDLIPEERLDEIMSTQNFLHPRYSGRTYEPSDRGLPE DPRTFVSERC >gi|302034478|gb|GL383157.1| GENE 199 204854 - 206152 785 432 aa, chain + ## HITS:1 COG:VC2699 KEGG:ns NR:ns ## COG: VC2699 COG2704 # Protein_GI_number: 15642694 # Func_class: R General function prediction only # Function: Anaerobic C4-dicarboxylate transporter # Organism: Vibrio cholerae # 1 420 16 439 451 327 53.0 3e-89 MMLFIQLAVVLLFIFLGARKGGLGIAYAGGAGVIVLGLLGCKVDPGTGIPWDVIGVIISV ISCVAAMEVAGGLELLVMLSERILRHNPKRITFLAPTVTFFMTVLCGTGHVAFATLPVIA EVAKEQKVRPSRPLSIAAVASQIGICASPISAAMVAMAAIVGPLGVSYPKLVLVSIAGGY VGSMIGAVVSSKLGCELELDPVYLQRLEKDQISHREADNYNIKPYARRSLIIFVVSLVVV MAYAAAITAVDKPPLPRGAAIMTFMMTAALVIATLCKVPLNEITSQATYKSGTSAAICVM GVAWLGNTFVSSNIDTIKAAGSGVIHSAPWLLFVVLFLAASLLYSQAATTVTFMPVAAAL GLPASVLVGCFAAASALFLLPTYPTVVAAVEMDDTGTTRIGKYIFNHSFLIPGIVSISVA CLASYGVMLVVG >gi|302034478|gb|GL383157.1| GENE 200 206253 - 206543 276 96 aa, chain - ## HITS:1 COG:DR1844 KEGG:ns NR:ns ## COG: DR1844 COG2388 # Protein_GI_number: 15806844 # Func_class: R General function prediction only # Function: Predicted acetyltransferase # Organism: Deinococcus radiodurans # 11 91 6 86 93 83 45.0 1e-16 MGCMSETTVTKNDQQSRYEAYIGGELAGFAEFRREGDVIVMLHTETFEAFSGKGVGSALA RFALDDIACQNLSVRPDCTFIKGWLDKHPDHPVNVI >gi|302034478|gb|GL383157.1| GENE 201 206551 - 206790 96 79 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|332674497|gb|AEE71313.1| ## NR: gi|332674497|gb|AEE71313.1| hypothetical protein PAZ_c01040 [Propionibacterium acnes 266] # 29 79 1 51 51 94 96.0 3e-18 MRCASWSTTGPSAPTVREYSSLGAGDPLVFVDGLLGSIGMTTPLYELSALFQIAPQQGHL QAHNATGEILYKKGRTQGR >gi|302034478|gb|GL383157.1| GENE 202 206672 - 208123 1508 483 aa, chain + ## HITS:1 COG:Cgl0256 KEGG:ns NR:ns ## COG: Cgl0256 COG0753 # Protein_GI_number: 19551506 # Func_class: P Inorganic ion transport and metabolism # Function: Catalase # Organism: Corynebacterium glutamicum # 6 476 20 504 516 498 51.0 1e-141 MPIDPSKPSTNTNGSPAPSDEYSLTVGADGPVVLHDAHLIDTLAHFNRENIPERKPHAKG SGAFGHLEVTADVSEYTKASFLQKGRETPMLARFSTVAGELGSPDTWRDVRGFSLKFYTD EGNFDMVGNNTPVFFMRDPMKFPHFIRSQKRLPNSGLRSPNMMYDYWSLSPESAHQVAYL MGPRGIPLSYRTMNGYSSHTYSWVNAEGKITWVKYHFISDQGVHNMTADRAKAIVGDHPD IHREDLFNHIADGDYPSWTVKVQLMPYDEAKDYRFNPFDITKVWPHKDYPLHTIGKFTLD RNPENFFAQIEQAAFSPSNTVEGTGLSPDRMLLGRVFAYNDAARNRLGVNYEQLPVNRPT TPTNQYTFDGQMAFEHSGSAPTYAPNSYGRDFATGYRTGSEATWEADGELVRSAQTRHAE DDDFGQAHALVHDVFSDAERDELVDTLVDLMANFDMEEPVIGNALSYWRNIDAGIAEATE GRI >gi|302034478|gb|GL383157.1| GENE 203 208161 - 209906 1212 581 aa, chain - ## HITS:1 COG:Cgl1399 KEGG:ns NR:ns ## COG: Cgl1399 COG1132 # Protein_GI_number: 19552649 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Corynebacterium glutamicum # 7 578 3 578 581 286 36.0 1e-76 MSTPRSLPLATAAQVRQEVQRAARGVRGYFIGAIVVITAASLLDLTVPVATGWIIDAAKA HRPTSALLTPALVMAAAVIGSRICNGAAQSLTPSFFTTIITRLRESMIAVGLGLDQQRVE KAGTADLVSRASDDVTAVRDAANGALPRLVNTMIMVIVSVGALASLHPLFFVPVFLAGVL YGLAIREFLRTAPPVYRAERNASTTQSQRILSTIHGVDVVRAFGLENLRTRAVANGSWQA IRWNLRGRFLGNTLVVRLLAGEAVATIVVAWTGYLLVTTDRLSVGAAATAVLVLLRLFSP VRFLLMFLNNLQAAWVCLQRVVGVIQARHDKPAVSERYQRGPTSIHVDQVSFGYQDGPDV LHTVSLDIPAGHTVVLVGESGAGKSTLAALVAGLLEPRQGSITMISGHARTVLISQEIHT FSGTLFDDVALGLAGQAEDWPDERVRDAVLAALERVGADWVEQLPHGVDTVVGRLGIRLS PAQAQQVALARALLADPPVIILDEATAEAGSSGATALDRAAAEAVRGRTALVVAHRLSQV TMADEVAVMDNGRIVEVGAPEQLRQSDGPFAALWRVWSNQH >gi|302034478|gb|GL383157.1| GENE 204 209903 - 211531 1066 542 aa, chain - ## HITS:1 COG:Cgl1398 KEGG:ns NR:ns ## COG: Cgl1398 COG1132 # Protein_GI_number: 19552648 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Corynebacterium glutamicum # 28 505 1 436 455 181 30.0 3e-45 MARDGRRWLLPGSVSSAFVSLVNIGVPMALGRAIDDGVVAADAAALTGWLALVALAYLVR AIAQTIRMQTNVGAGLAEHDLRIQALERITAPEGIGGRSRLPGDLLAVVVTDVRAVSRAF IALTSIPGNVVTLLGALISMTLINGWLALATVCIVPLLILLSVKGVAPVKRSTRRERRAE AAVAGSAADLTSGLRIIQGLSAQRRATARFRTASRQGLDATLRTRRVKGVYTGTINASVG VFITALTVLAGWLTLAGRISVGELVTVVGLAQTLGPPLRALGVDTATMLATAHASGDRFC ELRDSPAAWQIHPDDGARTTPGDGPVELHIPVRDFQLDVAGGTHVGVMAPQSVCDALAEA IDHGSETVLNGVPASRLNPAQRRRLVLVAPRSPELFDDTARANIVLDSQTTVARLNAVVD AAALDTVVAVLPRGLETEVGEGGRHVSGGQRQRLALARALLHSPDGLVLIDPTTSIDAVT TATIARKVRQLRAGRTTIIATTSPALLDQMDEVVLLDADGRQIARAPHRELLARDDYREM LS >gi|302034478|gb|GL383157.1| GENE 205 211666 - 212652 773 328 aa, chain - ## HITS:1 COG:MA0877_1 KEGG:ns NR:ns ## COG: MA0877_1 COG1239 # Protein_GI_number: 20089761 # Func_class: H Coenzyme transport and metabolism # Function: Mg-chelatase subunit ChlI # Organism: Methanosarcina acetivorans str.C2A # 7 323 9 328 384 347 56.0 2e-95 MAQRPVYPFCAIVGQEEMKLALILATISPDLSGVLIRGEKGTAKSTAVRGLAALLPQHRE IPGPYHLSPDEYPTHAVALNLPEVMPEPRTVQVPVVELPVGATEDRVTGTLDMETALREG RRRFEPGLLAAAHRAILYVDEVNLLDDHVVDLLLDSAAMGVNTVEREGVSVTHPARFTLV GTMNPEEGELRPQLLDRFGLCVTVSGEDDPDKRTEVIRRRMAFEDDPGGFSRTWEQDGHK LSERIQRATELVTQVVISDETLTTAARTCINAHVDGHRADIMMVRAARTLAAWNGCTEIT TEDLSQAARLVLPHRMRRQPLESVGRAV >gi|302034478|gb|GL383157.1| GENE 206 212654 - 214618 1056 654 aa, chain - ## HITS:1 COG:Cgl1951 KEGG:ns NR:ns ## COG: Cgl1951 COG1239 # Protein_GI_number: 19553201 # Func_class: H Coenzyme transport and metabolism # Function: Mg-chelatase subunit ChlI # Organism: Corynebacterium glutamicum # 3 369 8 365 367 276 44.0 6e-74 MTYPFTAVVGQDEARLALLLCAVNPRIGGVILSGEKGTAKSTVVRGLVELLPGHVMRTLA LGTTEDRLVGGLDLEATLVAGRPVLQPGLLSEVDGGVLYIDEVNLLDDHLVDLVIDACAG TVRVEREGLTASLPSRFVLVGTMNPEEGALRPQLLDRFGLCIDVHGESDPAVRAEIIRRR LDHDADPAEFDHRWQSDQNRQAAVIERARHIVAGVRLDEVVTELISCLCRQNHVAGHRAD IVMAEATRAHAALVGRGVATEDDVLTISEMVLRHRRRVETPSESPPPRNQHPDDQPDQPE QRPREPERPDPDVEKRQAGENLATPPSSSGEQQPEYHDGPQNQRDDGQHDPRKQPSGSGE QVVAAGDPFAVRPLEPSQDRFARRACGRRLRTRSNDRRGRYVSARPTDRPDDLALDATLR AAAVHQKSRRATERPDLAVHVKPIDWRAKVRAGRAASCVIFVVDASGSMGSRGRMTASKG AVLSLLLDAYVKRDRVCLIGFRRDRAEVLVPVTSSVEVAQHGLAELPVGGRTPLSAGLIK ACEVVRPLLLKDPGLRPLLILVTDGRGNVSLDGRPNSQATDEAIRVATKLGVDTRLSWVV IDTEDPRGIQLSRARDIATALGGPCLRIDDLRADDLVNVVSRLDPSHQSPRKDR >gi|302034478|gb|GL383157.1| GENE 207 214618 - 218523 2802 1301 aa, chain - ## HITS:1 COG:MJ0908 KEGG:ns NR:ns ## COG: MJ0908 COG1429 # Protein_GI_number: 15669098 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin biosynthesis protein CobN and related Mg-chelatases # Organism: Methanococcus jannaschii # 1 1269 5 1230 1232 739 33.0 0 MTTLSFFSAIGGELTLVSQALSRLRTRGLEITLFGRTKDQITDPELARAFAQAAARSDAI VLSFHGGTTSCPAWPALVEAWKNRRESGLPLPWIHIQPTSGDDDGLLAAQDWASGLDDGT WRGLIGLLEMGGPDNVEAALRILVDRVRGGSAPIPDVIPAPTEGIWHPRHGLFTNLAEYR HHLDPDLPTVGITFPRSYWLEHNTAHIEALIEAIERLDANTVPFFCLRLPDARRGNPSMA QTLEALLRDEDGNRVIDTLIDVHSMSMTAGVPANADAYPKLGVSVLHALTSYAPLAAWKA QGMGAMDVATQAAQPEFDGALITKFLATREVDRVDDLTGAVVPHMVPVPGRPEAMAELAL SWARLARTPANQRKVTIVFHHHPPRNDRIGCATGLDTFESVRRLLVRMAEDGYDVPEQFD SADDLAQVLLSSLTCDQRWLTPEQMYQRAEVHADLATSRSWYRALPASVRESMDRAWGPH PGSLFVHHDEFSFAGHLDGNVLLTIQPPRGNFEAVTDSDIHDPLLPPPHHYLAHYRWIRD VFKAEAVIHVGTHGSLEWLPGKGLGLSEECYPELALDRMVNIYPYIINNPGEGTQAKRRS AAALIDHLTPPMRQAELYDSTAEIDRILREYAGAQSQSPQRARLVAEQVWDAVTKTGLDT DLGLTSADVDADPVEVLDRVHHHLLDLQDREISDGLHVLGQVVAGHDDPIAAKVEYVAQL TRQLNGPVPSLREAVLNAWGTSLDEVSAKAGEPVPVTADLPDGLTGRQLMSEAHRRCVKL LTPVVVRHRDRHPDDTEAHDLAAQLCHEQLGAERGDVIETLTWVLTDLMPRLDATNNEID AIMTALDGGFVAPGPSGAPSRGNAHILPSGRNFFSLDPQTMPTPTGWREGVELADQLLRG YAEAHPDQPWPRTVGVVVWGTPNMRSGGADIAEILYLMGVRPVWESSGLVSGLQIIEPCE LGRPRIDVSPRISGLFRDAFPNLVEMIDRAVRMVAALPEPDDDNMLRAHVEADVVEMTAR GIDVEQARRKATLRVFGCPPGGYGAGVEELIETKAWQGKADLGRAYIAASSHAYGEGVLG QVETERFTASLKRMDVTVKNEDTREYDMLSCTDFYNYYGGLIAAATTVRGEAPMSLVGDS SDPTRIATRTTTEETRLILRSRILNPSWIEGLQRHGYKGAGDLSAVLDILIGWDATADVV DDGLWERVARRYALDPAMQEWFRQVNPHALHNIVDKLLDAAQRHVWEANPSTVEELENTY ADIEGTIEEVSDDPAIAPNTRVGAPPQNPAGGLDLSELGLV >gi|302034478|gb|GL383157.1| GENE 208 218520 - 219614 293 364 aa, chain - ## HITS:1 COG:SMc03767 KEGG:ns NR:ns ## COG: SMc03767 COG0641 # Protein_GI_number: 15966905 # Func_class: R General function prediction only # Function: Arylsulfatase regulator (Fe-S oxidoreductase) # Organism: Sinorhizobium meliloti # 7 232 1 232 372 82 30.0 9e-16 MTVRYLVLWPTAACDLTCPYCYRRDRRGGRMPVEVADTALDLVAEDVRTTGRPAHVQLAG GEPTLVPSLIEHVAKRVVEIRWEKVTCGIQTNAARLDGDIIAMLKRHSVRVGVSVDGPPP VHEKTRGSAAQTFRGLLALAHADIPVRVTTVLSALNVEHLDELAVTLATLPNVTGFGLDP LVAIGSATGRDDLVPCNEAVIDGITTLYRRLAQINALRATPLRWRELETVRTALRRGPVP TTSAVDPAGRTLLPVANHPYCHAAVRESMAVAPGGSVYPCSQAVGDMASRAGTVHSIDWE SLRRRFSQDRHTLRGPCHRCALAGRCPGDCPSRVEANALADPEQRRTPLTCLIDSTLARL ESAS >gi|302034478|gb|GL383157.1| GENE 209 219611 - 220612 682 333 aa, chain - ## HITS:1 COG:alr4033 KEGG:ns NR:ns ## COG: alr4033 COG1120 # Protein_GI_number: 17231525 # Func_class: P Inorganic ion transport and metabolism; H Coenzyme transport and metabolism # Function: ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components # Organism: Nostoc sp. PCC 7120 # 4 288 2 287 333 236 41.0 6e-62 MTGLALSNLTVGYRSGRHVTRVLSGVTGSVVAGQMIGLVGPNGAGKSTLLRSVAGLQPSL SGEVQINGTPTSRMSRRQVAQALSTVLTDRVSVARLTCRDVVSLGRHPHSGIGGRLRPHD HAVIDESLTAVGAADLADAFIGELSDGQRQRVMVARALAQEPSILLLDEPTSFLDPPGRI ALLGMLRKVCTARNIAVVVCSHDIEPVMRYADTLWVAGHNTDVVIGAPEDLARNGALEAA FRTEGITFDLRTLTFWQSDAGRPVARVVGHGVDADLAHHVLTRSGYRVVEQPGDEVLTIG VTDEGWAVDDCVLPTLSQLHEHLIGRHRERARS >gi|302034478|gb|GL383157.1| GENE 210 220609 - 221541 782 310 aa, chain - ## HITS:1 COG:alr4032 KEGG:ns NR:ns ## COG: alr4032 COG0609 # Protein_GI_number: 17231524 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Nostoc sp. PCC 7120 # 17 302 69 353 362 229 51.0 6e-60 MTVITGGTNVDPVSLTIIHDVREPRTITALLVGAALGMSGLEMQTLFRNPLADPYVLGIS SGASLGVALVVLSTSASAGAATFASGLGIGPDLLIMVAAALGAAVVLLIVMLAGRFIHSS TILLLLGVMIGYFVSSGVTVLLSRASPELIAQYTRWQFGSYHGVTWQNLRVMVPIIVAMI LASLLLAKPLNALLLGERYAQTMGMNLKVMRTLLVASTAILAGAATAFCGPIGFLGIAIP HLTRGVLGTADHRHLLPGCILTGSSLALMADILAQLPGDDVLPVNAVNAVFGAPVVMVIL IRWYREAEAT >gi|302034478|gb|GL383157.1| GENE 211 221831 - 223075 1177 414 aa, chain - ## HITS:1 COG:alr4031 KEGG:ns NR:ns ## COG: alr4031 COG0614 # Protein_GI_number: 17231523 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Nostoc sp. PCC 7120 # 17 410 45 423 426 270 35.0 4e-72 MSINRLVAGLAATTMCVATLTGCSHSEQSGSSANTSSSGSSRQGCIKDFDPSKDYFGDKA TLGDARDITVSYHKSYKVVTLKHPSNTATKPVQYVLVQCGVPDPHLDGELAKAQRITIPT TKVALGSTTLPMKFQMLGKLDSVAGMVNVDRVGNPDTRQALKDHKVASFAAGDNATEINT EKLAALRPDLFIFNLVSGSDNTSKIDKIKEMGIPVVAEPNFLESTPLGRAEWIKYDSLFV NAEKTANQKYDEIAEKYHATAKRTAKVKTRPTVLHGSQYKGVWYIKPNENYAIQFLRDAG GEYVFKDLHGVASRKLDTEAVIKQAQDADFWIDGPEKSSIPQILKADPRLKSLKALDNGN MWDATPRADPKHGNDYWQTGVVRPDLVLANLTAILHPELDRDHQFHFYRKATAK >gi|302034478|gb|GL383157.1| GENE 212 223132 - 224382 1238 416 aa, chain - ## HITS:1 COG:alr4031 KEGG:ns NR:ns ## COG: alr4031 COG0614 # Protein_GI_number: 17231523 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Nostoc sp. PCC 7120 # 56 415 68 424 426 250 34.0 4e-66 MPRRISALITLFVAPALALTGCSGSSNRTTSLNTSTATPSVGTGANMSGCIKSGEFDKDK DYFGDKATFTGARNVHVSYHKSYKVLTLGEQDRPAQTFVLLQCGAPKPALTGDLAKAPII DVPVKRVVASSTTQIPVFHTLGALDSIVGVNQIEQIYRGPARKALEARHIPSYGSSRMQI DTEKIISLKPDAVLAASSEVGEFKQVQSAGIPVLQDLDYLESTPLARAEWMKAYGILLNK EGAATKSFDSIAERYAEVAKKAKNAADKPSVLVGQETKGQWYVPGADSYMIKFMTDAGAS DVMAQAVKGNGATPTDAEVVFKYGSKADFWLNGNYMSMTTWHGKDDALKQNPRYANLSAF QHGNVWNPSKRTAPDTGNDFWQSGIVQPDVVLADLTYIFHPDLMKGYTPYYYTKLS >gi|302034478|gb|GL383157.1| GENE 213 224397 - 224627 127 76 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|328758508|gb|EGF72124.1| ## NR: gi|328758508|gb|EGF72124.1| conserved domain protein [Propionibacterium acnes HL025PA2] # 1 76 1 76 76 134 100.0 3e-30 MHGVSVRLPRVGFGLGHSAVGEVGANPTLSRNGNACKAQSGRLSEEWQLLTLAVGVCRAH YVRLSETCGMTAGRTA >gi|302034478|gb|GL383157.1| GENE 214 224684 - 225457 553 257 aa, chain - ## HITS:1 COG:no KEGG:PPA0108 NR:ns ## KEGG: PPA0108 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 257 1 257 257 479 100.0 1e-134 MTAPNRVPSRCLSITRLRDLLLADIPASRLVIACDTIGGIGPRPDDSYPADPVWCAHLGA RVPLLEVLCAGARPLVLVDTLCQDSASAQPMIAEFRRCALDAGIDPDAVTGSTEDNVATT QTGVGVTIIGVMHHEDVPKSLDGDVLVCVGAPISAPNDDVALGRREIVGVTEVKALMASG KVHDCVPVGSHGVAWEAKQLASTAGLRVAFQPTDVDLTRSGGPATCVVMACAKTNLEQLH ALVNPERPWAVIGHLRS >gi|302034478|gb|GL383157.1| GENE 215 225497 - 227281 1862 594 aa, chain - ## HITS:1 COG:SA0102 KEGG:ns NR:ns ## COG: SA0102 COG4716 # Protein_GI_number: 15925810 # Func_class: S Function unknown # Function: Myosin-crossreactive antigen # Organism: Staphylococcus aureus N315 # 34 571 14 551 591 492 45.0 1e-138 MTNFQDIYQHSYPVSPDGNPFVQNDLGRYTQNHPVPPDDVAERKAYLVGSGIASLLAAAY LIRDAQMPGENITILEEMSEPGGAFDGAGDTEKGFIARGGREMGQHFECFWDIMKDIPAL EMPEPYSVLDEFRIVNENDPNINPCRIINSCGHKRDASKMGLNKKGQLDIMRLLLAKESD TYYKSIEDWFDEDFLQSTFYLLWKTMFAFEQWQSLTELKRYMHRFLQYLPGFSNLSCLRF SRYNQHDSFVVPLVKWLTEKGVNFQYDTLVYDVDLEITAHRKIARGILWRDKEGGEHRID MSAKDLVFVTNGSLTECTGYGDMDTPAPYHKDMQAGWELWRNLVRRSPAFGRPDVFCGDA DKTVWQSISFNFIGRDHPFLKKIKELTGNDPLSGRTVTGGIITAEDSSWCISLTMNRQPQ FHGQPEDWGVAWAYGLYPFEKGDVVNKTMLECTGEELLKEYCYHFGLLDQFEEVKAHTKV RIATMPWITAFFMPRGKGDRPEVIPDGCVNLACLGQFVETPDDCVFTTEGSARTAMIAVY GLLDLDRDIPPIWPTQYDIRSLLASAKTLNNGRLPGSWLLSKLLKNTYYEDILP >gi|302034478|gb|GL383157.1| GENE 216 227400 - 229109 1167 569 aa, chain + ## HITS:1 COG:Cgl1428_2 KEGG:ns NR:ns ## COG: Cgl1428_2 COG0351 # Protein_GI_number: 19552678 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase # Organism: Corynebacterium glutamicum # 64 368 1 309 309 271 51.0 2e-72 MFGQFSAAERTSWWGGILAHGHGVRLGGAEITPVEPDLVRTGEGMSEMTISDALAERGTI PRVLSIAGTDPSGEAGTAADTKSIIAAGGYAMAVVTSLVAQNTEGVRAIHTPPTDFLVQQ LAAVSDDVRIDAVKTGMLGTAEIVDAVATFLDEHRPLVVVVDPVMVATSGDRLLAPDAEA AMREFCRRATVITPNIPELAVLCQSEPATTPEQAVEQARRWAAETGVAVVVKTGHLNSQR VDNMWVTTEGAMHVAPAARVETTNTHGTGCSLSSALATRLGAGDTPGDALAWVTDWLHEA IQYGSALNVGKGHGPVDHSHRARRLAEDASAVAWFAPIDPLESPQGLVVSAEPAPDAVVA PAGPWTTALWQASGDIARRIEDSDFVAVLVDGTLSKPAFEFYLGQDAQYLTYYSRALASL AARAVDPEESVWWAQSSQACLVEEAELHRSWLGDHIDVVAGPVTLAYTDFLLARALGDDY VVGTAAVLPCFWLYAHLGAKVPHVPDDHPYASWLQTYGDPEFVEGASHTIGLVEKAFQNA SAVTRARAAHAYLTACRHELEFFDQALRV >gi|302034478|gb|GL383157.1| GENE 217 229233 - 229463 134 76 aa, chain + ## HITS:1 COG:no KEGG:PPA0111 NR:ns ## KEGG: PPA0111 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 76 1 76 76 117 98.0 1e-25 MVHCPTATVAARPEGTPWVLDSTTIGLAPVRTRMAREFLDAGPDVAGEVAAARAGGPGSF RAQLRDALDKAARTAK >gi|302034478|gb|GL383157.1| GENE 218 229472 - 230125 473 217 aa, chain + ## HITS:1 COG:Cgl1990 KEGG:ns NR:ns ## COG: Cgl1990 COG0352 # Protein_GI_number: 19553240 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate synthase # Organism: Corynebacterium glutamicum # 3 217 6 221 221 186 53.0 3e-47 MTLDLRCYLVTSGIDRHTIETAAAAAGAGAGMVQVRAKELSTRDLLSLVLQVGEAVRRAN PATRVVVDDRADVAWAAIRARGNVHGVHVGLTDLPVRDARAMLGPDAIVGYTTGTLDLVR SAEPFADALDYVGAGPFRPTPTKESGRSPLGVQGYPALVGASSLPVVAIGDVQVADVPVL AATGVAGVAMVRAIMASDDPAAVVRQVVQSFDEVRVS >gi|302034478|gb|GL383157.1| GENE 219 230383 - 231342 576 319 aa, chain - ## HITS:1 COG:no KEGG:PPA0113 NR:ns ## KEGG: PPA0113 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 319 1 319 319 609 99.0 1e-173 MRENFELELRSNGGVARIVRDSPLRGQADRSVTRGDTVRILPGVVATTGAARRVTTMIQA LKLWHRGATLVGMAALVLLGLKNPVTQRRWDYTGIQAIEAFSPTRRLRRPRIWVHRWHVP HHFTIEEEGIRVAIPEVSVIILAIQGQWDWVCQALRQRLVTPASCRAVRKALTGRYSKAE VDRALADIDLNPWSIPELELARILRATGITGHKPNHQVWVGEGNYRYVLDQAFQAEMLGV EMEGRSVHGTPEGYEAMMVRSAHLEQAGWRILHTTPTMLRRDPKFVLDWIINHLHKRHRP KTTLTNQVLRQIMNSAVPA >gi|302034478|gb|GL383157.1| GENE 220 231712 - 231903 69 63 aa, chain + ## HITS:1 COG:no KEGG:PPA0114 NR:ns ## KEGG: PPA0114 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 63 13 75 75 105 96.0 5e-22 MGSVGKRDNGRVARFRWVVVPQPAPRKPRVVVKEPVMLDVIWLLGVIALFILLALCVKGV DAL >gi|302034478|gb|GL383157.1| GENE 221 231989 - 233659 1536 556 aa, chain + ## HITS:1 COG:RSc3382 KEGG:ns NR:ns ## COG: RSc3382 COG2060 # Protein_GI_number: 17548099 # Func_class: P Inorganic ion transport and metabolism # Function: K+-transporting ATPase, A chain # Organism: Ralstonia solanacearum # 6 555 4 588 590 497 51.0 1e-140 MTWICFLAGLALLAIALGIAQHHLGTYMARVFTSDKDTRVETWCYRVMGVNPRAGQTWKS YARAVLAFSFCGVVLLYALQRLQPWLPWSLGKGSVNPAVSFNTAISFVTNTNWQAYSPEA TLGHFVQLAGLCVQNFVSAATGIAIAVALIRGFVGRGEHTIGNFWVDITRCTLRILMPIA AVAAFLLIVGGAVQNFTGFLHVTGVAGGNQVIPGGPVASQEAIKELGTNGGGFFNGNSSH PFENPQPWTNMLEIFLILLIPFSLPRTFGKMVEDVRQGRAILAAMVVLFTVNLFAMAAAE FSGHGTAARLAGAAMEGKEQRFGLAQSVLFANSTTMTSTGAVDSMHDSFTAIGGMFTLLN MMLGEISPGGVGSGLYGMLVIAVIAVFIAGLLVGRTPEYLGKKIGPREMKLSALYILVMP TLVLCGVALSLAVPGLRSSVNTSISNPGEHGLSELVYAFTSAANNNGSAFAGLDASTNWL CAALGVAMLLGRFVPIILILALSGALVEREPVPVTAGTLPTHNALFTTLIVFTAILVTAL VFFPVLTLGPLAEGLI >gi|302034478|gb|GL383157.1| GENE 222 233662 - 235776 1832 704 aa, chain + ## HITS:1 COG:MT1059 KEGG:ns NR:ns ## COG: MT1059 COG2216 # Protein_GI_number: 15840460 # Func_class: P Inorganic ion transport and metabolism # Function: High-affinity K+ transport system, ATPase chain B # Organism: Mycobacterium tuberculosis CDC1551 # 18 698 34 703 709 738 64.0 0 MTVIPSNSRSRGLTGAQVRQALPGAIRKLDPRSQWRNPVMFLVWIGAVLTTIIAGLELLT GVTDGGVSVGFSTAIAVWLWLTVIFANLAESIAEGRGKAQAETLRKTRTATSAIRVDGWD ERNDPSAEHTTTTEVVSSELRYGDVVVVAAGQTIPGDGDIVWGIASVDESAITGESAPVV RESGGDRSAVTGGTTVLSDRIVVKITSKPGQSFVDRMIALVEGSGRQKTPNEIALNILLA SLSIVFVLVTLTLNPIASLAARPVSVTVLVALLVCLVPTTIGALLSAIGIAGMDRLVQHN VLAMSGRAVEAAGDVTTLLLDKTGTITYGNRRASEFIPMSDVSDEEIRDAAARSSLADPT PEGTSIVDLAREQGFVPDACGEQGKVVPFTAQTRMSGIDLPDGTKIRKGAGSAVRAWLTE SHINMDIDTRVHMDRRVDSVSQSGGTPLVVAVRTPDHSGKVLGVVYLKDIVKEGLTDRFA ELRRMGIRTVMVTGDNPLTAAAIAKEAGVDDFLAEATPEDKLAYIRKEQEGGRMVAMTGD GTNDAPALAQADVGVAMNTGTSAAKEAGNMVDLDSDPTKLISIVGIGKQLLITRGALTTF SIANDIAKYFAIIPAIFMATYPGLSALNIMGLHSPASAVLSAIIFNAIIIVILVPLALKG VAYKPAGASKILARNLRIYGLGGVVAPFIGIWLIDLIIRLIPGF >gi|302034478|gb|GL383157.1| GENE 223 235789 - 236394 443 201 aa, chain + ## HITS:1 COG:MT1060 KEGG:ns NR:ns ## COG: MT1060 COG2156 # Protein_GI_number: 15840461 # Func_class: P Inorganic ion transport and metabolism # Function: K+-transporting ATPase, c chain # Organism: Mycobacterium tuberculosis CDC1551 # 8 199 3 188 189 159 50.0 3e-39 MIISSRTRTALVGLRSMLLFTVIVGVVYTGLMTGLGQLVLYHQANGSQLTVNGKVVGSTL IGQSFTDKGGRPLPKYFQPRPSAAGDDGYDARSSGGSNMGPENPDLAKAIKERRSQVAAF NHVDADRVPADAVTASSSGLDPHISPEYADIQIARVAKARHLDKAVVRRIVDDNTTGRQL GFLGETKVNVVTLNAELDRQH >gi|302034478|gb|GL383157.1| GENE 224 236459 - 238927 1961 822 aa, chain + ## HITS:1 COG:MT1057 KEGG:ns NR:ns ## COG: MT1057 COG2205 # Protein_GI_number: 15840458 # Func_class: T Signal transduction mechanisms # Function: Osmosensitive K+ channel histidine kinase # Organism: Mycobacterium tuberculosis CDC1551 # 1 811 42 864 871 615 46.0 1e-176 MLLGAAPGVGKTYAMLDEGKHLRAGGSDVVIAVVETHGRAATAAMTEGMEVVPRHYVECR GIELPEMDLDEVLARHPDVALVDELAHTNAPGSRNEKRWQDVEELLEAGIDVISTVNIQH IESLNDVVEQITGVPQRETVPDTVLRRASQVEVVDLAPQALRDRLSSGKVYPAERIDAAL SNYFRLGNLTALRELALLWVADEVDHALADYRSEHGIDSRWEARERVVVALTGGREGETL LRRGARIAVRAGGGDLLAVHVTTEDGLRSPHPGELARQRGLVDKLGGSFHQLVGDDIPDT LIEFAKSVNATQLVIGASRRGKLSRLLTGHDVEADIIRASGAIDVHIVSHDAQAKALRLP RMGGSLSTRRRIAGFAVLAVFGPLLTWLLVSLRSPEALTTDVLAYELLAVVVALVGGAFP SLIAALASGFALDYFFTKPFYTVTVNEPLHLVALLLYLLTAALVSVVVDRAARKTRVARR AAAESGLLQSVAGLVLRGEDAVESLLSRATEAFGLSGARLMTDGKVVANWGITSDQVTEH RIDDHTVVEFHGPEPDASERRLMSVIAAQLGTALEQRQLEETAKAVEPLAATDRVRTALL SAVGHDLRRPLAAATAAVSGLRSEWSKLSDQDRADLLETADEALSQLANLVTDLLDVSRL QSGVLGVSVMPVDPAEVIMPALDELSLGPADVEIDLGSDVPEMVADPALLQRVVVNLLSN ALRYEPAGSRVRLAESSFANQVEIRVIDHGPGIPEDRRGDVMVPFQRLGDTDSSVGLGLG LALSKGFVEGMDGTLALEDTPGGGLTMVISLPQVGAEEASVQ >gi|302034478|gb|GL383157.1| GENE 225 238924 - 239607 603 227 aa, chain + ## HITS:1 COG:MT1056 KEGG:ns NR:ns ## COG: MT1056 COG0745 # Protein_GI_number: 15840457 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Mycobacterium tuberculosis CDC1551 # 3 222 4 223 226 243 53.0 2e-64 MRILIADDDPQFLRALRITLGARGYEVLLARDGQHALEMAIDHKPDIILLDLGMPRLDGV KVIEAVRGWSSAPILVISGRSGSAEKVEALDAGADDYVTKPFSMDELLARIRVLTRRIGQ DEVDEEPIVAFGSVWVDLAAHTVTRDGANVRLTPTEWRVLELLIRNEGRLVTRQTMLSQV WGSEHVTDTGYLRLYISQLRKKLEPEPSRPRYLITDAGMGYRVVLDP >gi|302034478|gb|GL383157.1| GENE 226 239629 - 240135 281 168 aa, chain + ## HITS:1 COG:no KEGG:PPA0120 NR:ns ## KEGG: PPA0120 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 168 7 174 174 317 97.0 1e-85 MPTRNVYVSDEDQNLFQEAAGLAGGFSPAVSEALREYVKRRKLMRGGAEQVEVDLRTDGI DHRVSFMGRRLVKVQRDHEQGCRIDTVYATAREQFAVVSKVRRVLPSWAEGKEDLWSHPE TWDKEFWTVGDRTLTVFANLDELRTADGELAERVDSALHVAPYEVLDI >gi|302034478|gb|GL383157.1| GENE 227 240763 - 241005 132 80 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313815552|gb|EFS53266.1| ## NR: gi|313815552|gb|EFS53266.1| hypothetical protein HMPREF9589_01695 [Propionibacterium acnes HL059PA1] hypothetical protein HMPREF9597_00651 [Propionibacterium acnes HL005PA4] hypothetical protein HMPREF9600_00236 [Propionibacterium acnes HL050PA3] hypothetical protein HMPREF9609_01771 [Propionibacterium acnes HL027PA1] hypothetical protein HMPREF9613_00514 [Propionibacterium acnes HL002PA1] hypothetical protein HMPREF9619_01853 [Propionibacterium acnes HL082PA2] hypothetical protein HMPREF9577_00495 [Propionibacterium acnes HL110PA3] hypothetical protein HMPREF9565_00892 [Propionibacterium acnes HL053PA2] hypothetical protein HMPREF9578_00984 [Propionibacterium acnes HL110PA4] hypothetical protein HMPREF9582_00552 [Propionibacterium acnes HL060PA1] hypothetical protein HMPREF9592_01171 [Propionibacterium acnes HL046PA1] hypothetical protein HMPREF9599_01704 [Propionibacterium acnes HL050PA2] putative serine protease [Propionibacterium acnes HL103PA1] putative serine protease [Propionibacterium acnes HL097PA1] hypothetical protein HMPREF9581_00557 [Propionibacterium acnes HL087PA3] hypothetical protein HMPREF9579_00631 [Propionibacterium acnes HL087PA1] hypothetical protein HMPREF9588_00741 [Propionibacterium acnes HL025PA2] # 1 80 1 80 80 135 100.0 8e-31 MRTPESSRASPWSWVVSTVLIPFTQSLAQLNMLSLLGGLVTIYASPALFVLRSGVIDNEN VVKGERRSSLAPHSLALRSY >gi|302034478|gb|GL383157.1| GENE 228 241092 - 241358 81 88 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313815554|gb|EFS53268.1| ## NR: gi|313815554|gb|EFS53268.1| hypothetical protein HMPREF9589_01697 [Propionibacterium acnes HL059PA1] hypothetical protein HMPREF9612_00944 [Propionibacterium acnes HL063PA2] hypothetical protein HMPREF9597_00653 [Propionibacterium acnes HL005PA4] hypothetical protein HMPREF9598_02160 [Propionibacterium acnes HL050PA1] hypothetical protein HMPREF9600_00238 [Propionibacterium acnes HL050PA3] hypothetical protein HMPREF9608_01689 [Propionibacterium acnes HL067PA1] hypothetical protein HMPREF9609_01773 [Propionibacterium acnes HL027PA1] hypothetical protein HMPREF9613_00516 [Propionibacterium acnes HL002PA1] hypothetical protein HMPREF9620_00733 [Propionibacterium acnes HL037PA1] hypothetical protein HMPREF9590_02307 [Propionibacterium acnes HL059PA2] hypothetical protein HMPREF9602_01114 [Propionibacterium acnes HL030PA2] hypothetical protein HMPREF9581_00559 [Propionibacterium acnes HL087PA3] hypothetical protein HMPREF9579_00632 [Propionibacterium acnes HL087PA1] hypothetical protein HMPREF9588_00743 [Propionibacterium acnes HL025PA2] # 1 88 1 88 88 174 100.0 2e-42 MARHLGDEQADNCCSQRLCAEQPAVGARIAGLSNRDHLKQHDLQGAYADTVNDPGEQVCH DTWIPEEALLPETFPIAGRTRVGKCWGD >gi|302034478|gb|GL383157.1| GENE 229 241533 - 241745 180 70 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|327334689|gb|EGE76400.1| ## NR: gi|327334689|gb|EGE76400.1| cytochrome c family protein [Propionibacterium acnes HL097PA1] # 1 70 1 70 70 116 98.0 6e-25 MRSETSSQPFCPVSAEQKQPAEPLGVVFVGAFGLLGQLLAVALLFVIPVIPVVYLFLDRE NQSQPAGFEQ >gi|302034478|gb|GL383157.1| GENE 230 242321 - 243694 848 457 aa, chain - ## HITS:1 COG:CC2578 KEGG:ns NR:ns ## COG: CC2578 COG0612 # Protein_GI_number: 16126816 # Func_class: R General function prediction only # Function: Predicted Zn-dependent peptidases # Organism: Caulobacter vibrioides # 13 450 482 919 927 103 24.0 5e-22 MKTCNERPLTSRPTVRPGSPWSFPQCLVETLPTGLTVVRVPMPGQRIVTMEIGLDAPLCT EPAGLEGLAGLVVRTADESTGPHPGAAFAEAMESIGASYDGSAGLAGSHVGVDVPVTRFD AAAELFVELLNTTSLVEEDIARQIDAARASLAQTSQRGSALAEMAAARALWPVGSRSSLP TIGTLSSVEKLNAAAAREFWAAHWTISDAVLVVAGDGVEDLDLSILEEWTASGSPSQVAP LQPRLDGPRVILVDRPDAVQADVRIQQATVGRSHPGWAALKVACGALGGTFGSRLNQVLR EDKGWSYGVGMSSRPLPDGGVATVAGSFRTEVGADAVAEALRILTSSDDLRADEVDAARD HSVGIAPLQYDTASAVAHQVAALVGAGLAPNWVDDHLAAVASARASAGEWSVNRAWRELL IPDSWRIGVCGRAEELAPALAERGLEAVVVSPAEVLS >gi|302034478|gb|GL383157.1| GENE 231 243694 - 244965 720 423 aa, chain - ## HITS:1 COG:XF0816 KEGG:ns NR:ns ## COG: XF0816 COG0612 # Protein_GI_number: 15837418 # Func_class: R General function prediction only # Function: Predicted Zn-dependent peptidases # Organism: Xylella fastidiosa 9a5c # 13 411 80 477 990 250 37.0 4e-66 MLGPMSEALQLHRATLDNGMRVVVNPDTTSPGVAVNMWYRVGSADEEPGHFGFAHLFEHL MFSGTTSGIISSEHLATIESVGGSANASTSFDRTNYFETVPAGALELALWLEAERLAHLA VTEANLATQREVVKEEKRQRYDNTPYGDLLDMLLDGRFGSEHPYGHPTIGSVPDLDAACL DDVTAFHSTWYRPDNAVLVISGCVEADEGLTLADKYLGAVPAATGDLPERIQGRVRHDNP RVVVTRPLPRTAVTRAWATPPITNPNNLTVAMATDILGSGMSSRLIRTLERERHLVDGVG MNDFGLARGTSAALVSAHLKPGVSEEELTGAVDEIITELAANGPSQAELERARAQVERSW LESLAVVDERADLLNMHESLLGDAALVNTHLDRIRAITADHIAEAARRWLSPHQASTVVH QEA >gi|302034478|gb|GL383157.1| GENE 232 245171 - 245590 275 139 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3138 NR:ns ## KEGG: HMPREF0675_3138 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 139 35 173 173 261 100.0 6e-69 MQTQRNVVSHALQRRHTLEALRSPQVDLSAPTACDADPMLVRAAMHHGEPLNHDCPVCES PRLALLRHAFGHQLGQYSGRIRTLDELEEMEHQFGEFHVYEVEVCPDCLWNHILVDYVLG DGRRRRPPRHQPTVEDIYG >gi|302034478|gb|GL383157.1| GENE 233 245583 - 247922 1761 779 aa, chain + ## HITS:1 COG:Rv0050 KEGG:ns NR:ns ## COG: Rv0050 COG0744 # Protein_GI_number: 15607192 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Mycobacterium tuberculosis H37Rv # 51 659 2 615 678 272 33.0 2e-72 MADHKPARASKRHAPATGSGAGRARRAAGRPSRHPRLGKFLRGLVIAILSLVLIAVVGVF VAYERTELPDPNRDFQTNTSFIYYRDGSRLGSFSVQNRQSIPYETMPKTLRDAVVSAENR TFWSDPGISVKGMTRAAWAIARGGEMQGGSTITQQYIKVLYLSQERTMGRKFKELLLAVK TGKEVSKKDILAGYLNTIYFGRGAYGVQAAARAFFYTDASKLTLSQSAVLAAVLNSPSNF DPSGGVGARERLLQRYRYVLDGMLEAGNITQAQHDEAYRQLPKFPKVPDYNRWAGTDGYL MKLVYDELIARGFSDQQIKGGGLKVTTTLDRKDEQAAVAAGQKYKKIAGRNAVPEGAKNL HPALASVDVSSGGVLALYGGDDYISNTRDWALTARPAASTFKTYAAIAGMRHGFSLRSRL EGNAFTPDGDSTEVHNENDRNYGTVSLRQAIAKSINTAFVDMVSRIKNGPRAVVQAATDA GLSQGTGWDLNNRIALGTAEVSPLAQAGGYATIANDGKRVTPHIVDKVVDQSGKVLYQAP TPSKQTIEADISHDVSYALQSVVEEGTGRIVAGFDHHVAGKTGTSGVGHGVTSAWFVAYT KQISTAVMFVAGDSGNENLDRYAREGATGFHGGDYPARTWLDYMQTAMKGIPNKSFAAPD WVNLSGKHYGSTNRPQVSVEDDSDRDRSNQDDPESLGGPYPTRTSASSPEPSSAPSREQS SEPSATRTASAHTHTSKPTQTSQPTHTSRPTHTSTHTSRPTSGETTRGGNQPSGRAQNG >gi|302034478|gb|GL383157.1| GENE 234 247932 - 249479 759 515 aa, chain + ## HITS:1 COG:Rv0051 KEGG:ns NR:ns ## COG: Rv0051 COG5650 # Protein_GI_number: 15607193 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Mycobacterium tuberculosis H37Rv # 212 503 216 525 560 105 30.0 2e-22 MTIPDPKDDAMAARRCAVAHPNDGSPGYTARRGLDVPRGSRVSQLGLDRRIGGRMGRHAW PRGVFFDPGPWAIMSAIVIWLLTIYRVTPCVQHNVAKVVDPYQRQCYSDIPTLYRSSGMG HGGSLFANPDIAQTPLVTVLMAFCRRVVWAFGTEVSPKATDQQVLDAANAYWGVAQIVLF VAFLAIAISVMLLGRGSDTNLPVGDKGRPTQARRRSWDVFWVVLCPAVYLAGLIDFSMVP VALATTSMLAWARRRPWLSGILMGLACAGSLQAAVVAFAVLVCCLRATRLPELGRYLLAG SLMLVVCHVIAACLGLHTWWAYLRSTFWSGTGLGTIWYVIQDSSGGIIPGIGWITGTLTV GGLLGLAWLLMTVPRRPRIAQVACVALLILFITNKVYSPQWILFLVPLAALARPDLRDWA VLMVGECFYSLAVWAHLGGLSLPGGSDADVVYWASIVLRLACEIWFAWGVLDDIRRPWND VVRVGYADDPTGGVLDHAPDPAPEPVEDSSAEVAR >gi|302034478|gb|GL383157.1| GENE 235 249476 - 250651 730 391 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3141 NR:ns ## KEGG: HMPREF0675_3141 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 391 1 391 391 619 97.0 1e-176 MTRTGRATARRFAPTADGRLVTQTWLGSRAILLVVAVVVMTGYHRTFSQVTGNWDVQHYM SIARNGYADPLEMAFFPGLPALLKGGSFLGIPMEVTGVLLGLIGSALAAWALFRIGGMLP ACLWLIAPATVFTMVGYTEAPFCAAAFWAWERARAGRWWAAALLAGLACTFRVSGLFLIG ALAVLAVLGDGDEGRPMSQAARRRRLINVVNRLSTLLVPTAVLVAFVVWLHRLTGSWTAW SQAQTNGWRRGFTTPAETLRHTLPATHADTWRSLYGAGASGVAIVFRLELVSVALGVLVF VYCLIRRRWASASWVGIQVVAFSIGYWYMSVNRATLLWFPLFVALAEVTRGPSKPPGLVL LWRGIMGIVIAIDLAVMVWWGWRFFTGGWAS >gi|302034478|gb|GL383157.1| GENE 236 250729 - 251985 440 418 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3142 NR:ns ## KEGG: HMPREF0675_3142 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 418 28 445 445 634 97.0 1e-180 MVVETFADFRHGLTSPPWIVSSYLIVDVLIILACGSALWLRRHDLGRAGRWMLGGALGFM VWAIVSATFCPLPNLGPEPVARLLLVMAPVTAVATLLAGLSVAAGLTIRSSGRMVIERLW WPAAAMTCASYLQWPRAMKVHGSTRLATGMGGSAVLHVALLLACGVLVAAAVAGCRRVVS GILATGALVAVILTGSRAGLACATLFVLGCAIGSVMWRRSRVVRRAGHRRMVWGGLVALA VVVIGMVIVVPGLRRMLNPSDPMRSRTLRTGIQVWSSDLNHVFFGLGSGRLWPWYLYDCH ARQEPWRELMTTQWGPTLSSAHSTVLAVLVELGLLGFVLLLPVLLGPVVELVRRLFDGTG SPAGVVLRWAVVATLPAFLVDTYLVKNFGVSMWWWVVTLSSVAWTDQRPPSTSRQNSG >gi|302034478|gb|GL383157.1| GENE 237 251946 - 253208 741 420 aa, chain - ## HITS:1 COG:SA0125 KEGG:ns NR:ns ## COG: SA0125 COG0438 # Protein_GI_number: 15925834 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Staphylococcus aureus N315 # 257 361 231 330 388 74 38.0 4e-13 MAHRESTLILLTNTYPLSRGEEFLENEIDHVGRAFDRVVIIPIQAGPADVQTRAIPSNAQ VMHIARSSPRGLDRALVAVKGLVRLPPSGVDWAATRRQPRLLVSDAHFEGRAQTALNGIL AKLPSLRLTPESHVTIYSFWLHITARTATLLADQLRAQGVTMDRVISRAHRYDLYPSASP RHHIPERRLLLQSLDGICPVSEQGTRELRTTWPQYAGKIHTRYLGTSDPGPTAHCRRDPF TIVSCAHLVPVKRMIRMAAILARVRANGIDAHWTHLGDGPQMDTLREEVAVHRVTDAVTL LGHVDNTQVMATQRDLKPSVFVNLSSSEGLPVSMMEVASLGIPIIATGVGGVGEIVSSDN GHLLPAEFTDAQASDALVQLARLSEDEYQHVCQASRQVWEAKFRASVVYPEFCREVLGGR >gi|302034478|gb|GL383157.1| GENE 238 253271 - 253516 86 81 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQRRTSRSAPVCGMGCPPIRRTIHHNGTRGLGLHQTCNSTRHHVETATHTQYPTTVAITF GNRRIEILDGTGSLHQPYCHT >gi|302034478|gb|GL383157.1| GENE 239 253476 - 254603 1064 375 aa, chain + ## HITS:1 COG:no KEGG:PPA0131 NR:ns ## KEGG: PPA0131 # Name: not_defined # Def: putative glycosyl transferase (EC:2.4.1.-) # Organism: P.acnes # Pathway: Fructose and mannose metabolism [PATH:pac00051] # 1 375 1 375 375 729 95.0 0 MPQTGADREVRRCIYHVPYPLDPNTTFGGQKRAVAMFKALTQWGEVWVVAGDAHQRRRLM QVVMNAIRAGTRFEFCYSESSTMPTTLTESHHLPTHPLEDFAFLTRLRRHGIPVGLFYRD VYWKFPLYGEGVPKAKQLVAQAMYRYDLLAYRQCLDVLFLPSLRMGEWVDVGGRVNKVAL PPGHDIDETPTATPSSPLSMFYVGGLGSLYDLRAFCEAVASVPEASLTICTRPKEWEQAH KDYEHLIGNNTKVVHANGKKELEPYFAAANVAVLAMAPHEYRDFAAPLKLFEYIGNGKPI IATEDTFVGDVVTRDELGWTVKASVVEFAALLEQLTQHPERVDAARDRVMAARDQHTWAA RVEELVAALAAVDQR >gi|302034478|gb|GL383157.1| GENE 240 254600 - 255922 916 440 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3145 NR:ns ## KEGG: HMPREF0675_3145 # Name: not_defined # Def: O-antigen polymerase # Organism: P.acnes_SK137 # Pathway: not_defined # 1 440 1 440 440 714 95.0 0 MSVAERTAARPLDRQGMASRATSGVWLGAVAAVLVMRLPMGFLLFLIVPWVILAVQTRFA SSLSVTPLVAVEVCCMVASGMAVALFHPGLLADTGNSAFIMLAVIGVTLVVFRSAEPGRT ARQVLSGLYWGAILVWLIGMGEIVTGVKLLPLLYPRANTLGAVSKNRWVVTATYPNYNDY GVVMAMLFTAVLARLWFNPRRGAIRLGRLFVLATCLVMILIGGSRGALFGCICAVVLLFV LNVRRLHTAAMGVRAFVWGGALVIVLGTGLWMSPYVQDHSTAERGTIMANALSMTLSSPA ALLLGYGSLSEYQARASALYGHVLMDPHNLLLEIVLRYGAIAMILFVICWLWILVRGFLP RRPVADWRAAFGLTVVMLFPVLGVVPSSTLRYHVTWLYLVAASCITAETVAANGAGRPTL GMVRDAVTQLERSAGSTGAA >gi|302034478|gb|GL383157.1| GENE 241 255896 - 256672 682 258 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3146 NR:ns ## KEGG: HMPREF0675_3146 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 248 1 248 258 421 96.0 1e-116 MSSLPSEPTVAQSGSSAIEREATTDSSNQPPRPRDPGQPIDLLGFLKGLGHHWLAGLITF IVAAGLLVGYSLLMAPKNTVGTVAAHAHVMVTLPEPRTEAQATVESATVGQIMSNYVALT TPDPIVNTAVKYLHDGTTADDLKAGTSVYWGGGGTVIAVYAMGTNQNQAIERANAYARAF AEKANDLVPSSLAGLPQPKLTIIQPAFPSDPNPNAPATNKNSTKLSSPMVGVAAGLILGL VVMGVLEYRSSRRSRTSR >gi|302034478|gb|GL383157.1| GENE 242 256674 - 256898 136 74 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|315109979|gb|EFT81955.1| ## NR: gi|315109979|gb|EFT81955.1| hypothetical protein HMPREF9602_01099 [Propionibacterium acnes HL030PA2] # 18 74 1 57 57 108 100.0 1e-22 MVTPSSKSAVSMIRGSPMWDAFHAGYIKASLLVLARQARRPCTATPKIRRGGPPSNQFNA RVSPVCLAELCSMH >gi|302034478|gb|GL383157.1| GENE 243 256846 - 257463 630 205 aa, chain + ## HITS:1 COG:PAB0773 KEGG:ns NR:ns ## COG: PAB0773 COG0110 # Protein_GI_number: 14521366 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Pyrococcus abyssi # 9 177 12 173 205 146 46.0 2e-35 MGEPRIIDTADLDDGVTIGDGSSIWHLSQVRSEAVLGQNVVVGRGAYIGEGVHVGDNCKI QNYALVYEPAKLEDGVFIGPAVVLTNDHFPRAINPDGSLKSADDWEQVGVTCKRGCSVGA RSVCIAPVTIGEWATVAAGSVVTKDVPAYALVAGVPARRIKWVGRSGFPLDPDGENKWID SRTGDRFVEDPATDTLTLVSEGEQA >gi|302034478|gb|GL383157.1| GENE 244 257547 - 258659 1221 370 aa, chain + ## HITS:1 COG:PAB0774 KEGG:ns NR:ns ## COG: PAB0774 COG0399 # Protein_GI_number: 14521367 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis # Organism: Pyrococcus abyssi # 6 359 2 357 366 315 48.0 1e-85 MTAQFIPPAKPILGDDERKAVDEVIASGMVAQGPQVHAFEDEFSSQVVDGVHCVAVNSGT SALHIGLLASGIGEGDEVIVPSFTFAATGNSVALSGAKPVFADVDPVTFTLDPASIEASI TDKTAAIMPVHLYGLPANMAEIVAIATKHGLKIFEDCAQAHAASIDGKHVGTFGIFGAFS FYPTKNMTSGEGGMITTSDPEIARKAAMLRNQGMEKRYANEYVGLNNRMTDIHASIGRVQ LTKLAGWTKTRQENAAFLSSNITEAITPAVPEGYVHVYHQYTIRLEGATGEERDRFVTAL KEEHQVGSGVYYPIPNHRLPSLAPYAPGLELPNTEKVAAECVSLPVHPSLSQADRERIVA AVNTCAKAGA >gi|302034478|gb|GL383157.1| GENE 245 258659 - 259651 1031 330 aa, chain + ## HITS:1 COG:MK0248 KEGG:ns NR:ns ## COG: MK0248 COG0673 # Protein_GI_number: 20093688 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Methanopyrus kandleri AV19 # 4 320 3 304 317 171 34.0 3e-42 MANLRAGMVGIGSMGKNHVRNLRAIDGVDLVAIADASGKDPFGVAGDLPVLPDVDAVIET GIDYCVVAAPTKFHEEIGLKLAEAGVHALIEKPLAYDTAAATRLAEAFESKGLVGAVGHI ERYNPALQSLRKRLENGDLGDLYQVATRRQGPFPARIADVGVVKDLASHDIDLTAWVTQR EFELVAARTMFKAGRDYEDMVSATCQLSGGLMSNHLVNWLTPTKERRTFVTGEKGMFVAD TLTADLTFYSNAKVATVWDDIANFRGVAEGDVTRFAIPKPEPLRTEHENFRDAVLGKESD IVTMTQGATVVQVCEAMITSAATGEFVKIS >gi|302034478|gb|GL383157.1| GENE 246 259753 - 261135 597 460 aa, chain + ## HITS:1 COG:no KEGG:PPA0137 NR:ns ## KEGG: PPA0137 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 460 1 460 460 837 98.0 0 MTPIFRLHDSPDGSSAVTLLRSVAPIEWFSGAAEVIVACLFVTCTFVTVAQPVFDNGACQ LMLPLFAVAALVLEALCIVRDVRGVPSPREWSRSLIIVTCSFVALLVWGAVSIPFHEHLI YDDSMGVTRDLPLYALVMPLAEATVTLLVAIFACRMIAVGNLEGALWRLSMLMAIANPID LVREYVEGNTTGWRVATRLGGAAICHVLLILALAVAVDAVIRHRHRILSSVAAVSHLACL AASGSRAGTISLALFVIGLVFFGRSYRTRSRKQRTVIAMLGLLAAGVAIWLVSTVRSGSL VDPARARTWALAGRVVVDSPSHFLVGTGYGTIWPWFAVESTFMPESSHGMRRTLYGYSLP HAHSLIVQVVGELGVIGLALILVCLGTVIAVCVKGIRGGYPLLSLGVLATMPAFLMDTYL IKNFPVALFWWIFTLALCRLVTTGDADVEGDSGYREEKYA >gi|302034478|gb|GL383157.1| GENE 247 261106 - 261417 75 103 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313814073|gb|EFS51787.1| ## NR: gi|313814073|gb|EFS51787.1| hypothetical protein HMPREF9587_00461 [Propionibacterium acnes HL025PA1] # 1 50 1 50 72 102 94.0 7e-21 MLRPKTSCFGGGGDAFRVDIKRFEGHFPFLSDVMRHHEVLQDNGSELPPGDDRPVPRQWC PCSSHRDSVVTSVNNDEDRLVRKYYSRATKSYLFSGVLLLAVA >gi|302034478|gb|GL383157.1| GENE 248 261340 - 262917 1637 525 aa, chain + ## HITS:1 COG:lin0564 KEGG:ns NR:ns ## COG: lin0564 COG3104 # Protein_GI_number: 16799639 # Func_class: E Amino acid transport and metabolism # Function: Dipeptide/tripeptide permease # Organism: Listeria innocua # 32 516 3 491 492 308 37.0 2e-83 MSLEPLDVDAEGVAAATKARGFRPKHLVTGPSRDDKSFLGHPGGLPWMLQVEMWERFSWY GMRAILVYFITDTLAHGGLGLPINAGQVVMASYGAAVLLMTIPGGIFADRILGPWMSTLC GGLIIMTGHVILAIPQVVTSWIGLICIAIGTGFIKPNLSTVVGGLYDDGDPRRDQGFLYF YMSINIGSLFAPIVTGLLKDHYGYHVGFIAAAIGMALGLIAFFHGRSKLREFAFDIPNPL APGEGRRMVLRALGIAVVGAVLAIGFKALLGEWTSAIAYALFAFASVTALSYFLTMFRSP KVSDRERGHLWAFVPLWVGQVLFTMIFEQAAGKMATFAKDNTDGHIVGSWSVEPEQYQTI NPAAVLILAGLLGMWFRRREGKFPNTPQKFAISVFIIGITALIMGFGFRSWPGGNRLAPW WLLAVVFVIQTVAELFMNPIGLSTATKLAPKKFASQNMTLWLLASACGQGLASVTIERTK NLGDVVFYYSLGIVTILVAVVLFVIAPWTQAKMKDVDSVAEEGDV >gi|302034478|gb|GL383157.1| GENE 249 263161 - 264345 982 394 aa, chain + ## HITS:1 COG:Rv0688 KEGG:ns NR:ns ## COG: Rv0688 COG0446 # Protein_GI_number: 15607828 # Func_class: R General function prediction only # Function: Uncharacterized NAD(FAD)-dependent dehydrogenases # Organism: Mycobacterium tuberculosis H37Rv # 15 360 19 369 406 171 35.0 2e-42 MNPILGADMTTYQYLIVGGGMAADSAARGIRDIDKKGSIAILSADVDAPYPRPALSKKLW TDPEFTWDQVDLATVADTGAELRLGTEVLSIDRDDKTVLTASGQVFGYQKLLLVTGLTPS RIDDDGDAVLYFRSARDYQKLRALAQPGHQFVVVGGGYIGAELAAGLVQQGCEVTLVTLD PTLGGSQFPAQIASEYQKLFADAGVHLVTGKRVCSVRKHEVAEVTLDDGTILQADDVIAG LGASPVTKLAEEAGLTVNDGVVVDEQLRTNDPAIWAAGDIANYPDPVLGRTRVEHVDNAT AMGKAAGRIMAGSKDSYTHTPMMYSQVFGVRWEAVGTLDSSLATTSVEAGDGQVVYYLSD GKPVGVLLWNLPGRTDKAVTVLADPPEDLSTAIS >gi|302034478|gb|GL383157.1| GENE 250 264361 - 265161 895 266 aa, chain + ## HITS:1 COG:mll1036 KEGG:ns NR:ns ## COG: mll1036 COG1028 # Protein_GI_number: 13471147 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Mesorhizobium loti # 4 266 15 268 268 134 31.0 3e-31 MDLGLNGRTALITGADSGIGWHTAKLLLAEGANVAITDLDSDELTQAAQALDVADDRLVA LPADVTDADSLAKLHQQVKDALGPIDILVQSAGVTGAQGKFHEIDEEGWRSTLDIDLMGP VRVLREFLDDLRTGGWGRVVLLASEDGVQPYDDEIPYCTAKAGVLALAKGLSRTYAREGL LVNAVSPAFIHTPMTDAMMNKRSKELGVSFDEAIESFLDQERPYMELKRRGEPEEVAAVI AFLCSDKASFVNGSNYRVDSGSVATF >gi|302034478|gb|GL383157.1| GENE 251 265225 - 265482 284 85 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3154 NR:ns ## KEGG: HMPREF0675_3154 # Name: not_defined # Def: phosphocarrier, HPr family # Organism: P.acnes_SK137 # Pathway: not_defined # 1 85 1 85 85 110 98.0 3e-23 MASKTVKVGSSVGLHARPAAVISQEAAKLSSTVTLATEGGEPIDAKSVLLIMTLGASAGD PVTVAGDNEDDVNTIADLVASNLDA >gi|302034478|gb|GL383157.1| GENE 252 265518 - 267530 1939 670 aa, chain - ## HITS:1 COG:Cgl1891_3 KEGG:ns NR:ns ## COG: Cgl1891_3 COG1299 # Protein_GI_number: 19553141 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, fructose-specific IIC component # Organism: Corynebacterium glutamicum # 312 669 1 364 378 345 57.0 2e-94 MSTPLITPELVSLDANLGSTKTEVITSVAGLIAAAGRADADGLAHDTLDRESKSPTGMPG GFAIPHCRSAAVSQVSLGFARLSPAVDFNGPDGPADLIFMIAASEDGGADHMKLLTKLAR ALVNPEFVEQLRQAPDAQTVVDLIGGVVEPKEEASTSSATALPAPGHAAVTNTASDTPRI VAITACPTGIAHTYMAADYLRAAGKKLGVDVKVEPQGSTATEPLSTADIEGADAVIFATD VGVKGRERFAGKPVIESGVKRAVDEPEKMVSEAVAASKDPHAHRVPAGHGEQQEPEQAGS HIGWGKRIQQALMTGVSYMIPFVAAGGLLIALGFLFGGYEIAKDGMDIALHNTFNNLPTP TAHALGGSATMTYIGAVLFAVGQAAFGFLLPALAGYIGFGLADRPGIAPGFVAGAVAGVT GAGFIGAIIGGLLGGFVAYWFTRLNPPRWLRGLMPVVIIPLVGSLVAGGLMYVVLGRPLA ALTNALNNWLGGMSGASAVILGIVLGLMMCSDLGGPINKAAYLFATTNLAVTNVGSLKVM AAVMAAGMVPPLAMALSTTLRPKLYQPAERENGTAAWLLGASFISEGAIPFAAADPLRVI PSMMVGGATTGALSMALGAASKAPHGGIFVFFAIDRVWAFILAIVVGTLVAALLVTALKA SARRKAAAAA >gi|302034478|gb|GL383157.1| GENE 253 267540 - 268514 391 324 aa, chain - ## HITS:1 COG:Cgl1890 KEGG:ns NR:ns ## COG: Cgl1890 COG1105 # Protein_GI_number: 19553140 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) # Organism: Corynebacterium glutamicum # 9 324 1 323 330 237 45.0 2e-62 MAKAEGVHVIVTVTLNPSIDRTAPIAGPLRRGQVNRLGSSTEVAAGKGVNISRVLRGAGI ETCAVVPAGAKGRLTLGLNHDDIPHQVVPVAAAVRTNLTITEPDGTTTKINEPGADLSPE ELTAVEEAIVEKSSGAQWVVLSGSLPPGVPTHWYATMTDRLHEVGVKVAVDTSDQPLQEL AVRLPDCAPDLVKPNSVELGQLCGIDGGSLESAATRGQFDDVVVAARGLHGIAEVIVTLG GTGALLITEHDAWHARPEPVKVKSTVGAGDSSLAGFLLARTRGDQPENCLRAAVAWGTAA AALPGSTMPTPSQADAIHVSLTHL >gi|302034478|gb|GL383157.1| GENE 254 268487 - 268705 151 72 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|314982717|gb|EFT26809.1| ## NR: gi|314982717|gb|EFT26809.1| conserved domain protein [Propionibacterium acnes HL110PA3] # 1 72 2 73 73 119 98.0 1e-25 MIASATIAHGSTPRRNPDCHIDVWTTYASPRSEKPTQQMSVLVCLRTRVSHIPTLMVLSG PRNRWPKPKEST >gi|302034478|gb|GL383157.1| GENE 255 268819 - 269580 572 253 aa, chain - ## HITS:1 COG:Cgl1885 KEGG:ns NR:ns ## COG: Cgl1885 COG1349 # Protein_GI_number: 19553135 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Corynebacterium glutamicum # 1 253 1 258 259 174 41.0 2e-43 MYPAERHKWLIDTARETGRVSVAEASTALGVVPETIRRDLDQLCNQKMLRRVHGGAIPIE FDLLGDQPLATRDSSAVTQKEQIARAALSHLPSDKGSIILDAGSTTGRLASIMPSTRRFT VFTNSSPIASTVATHSNCDVHLLGGRLRPTTQATVGNVDAISRLRVDVAFMGTNGISPTH GLSTPDADEVATKAAMVASAHHVVVLADSRKMGAESTMRFAELGDVDVIITDSGVTPHQV DMLHKAGVEIVIA >gi|302034478|gb|GL383157.1| GENE 256 269745 - 271043 1363 432 aa, chain + ## HITS:1 COG:PAB0776 KEGG:ns NR:ns ## COG: PAB0776 COG0677 # Protein_GI_number: 14521369 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetyl-D-mannosaminuronate dehydrogenase # Organism: Pyrococcus abyssi # 1 416 21 432 448 255 37.0 1e-67 MKIAVVAMGKIGLPLAVQFAEKGHDVIGVDVQQRVVDEINKGNEPFPGEAFLDEKLKKLV PAGKLTATTDYSQAIPGADAIVLVVPLFVNDETWEPDFGWMENATKSLAEHLTPGTLISY ETTLPVGTTRNRWKPMIEEISGLSEGKDFHLVFSPERVLTGRVFADLRRYPKLVGGLNDE GTANGIDFYQQVLDFDDRDDLPRANGVWDMGTAEAAEMAKLAETTYRDVNIGLANQFGKY AAANGIDVYKVIDACNSQPYSHIHRPGIAVGGHCIPVYPRLYLWTDPDATIVRTAREANM TMPQYCVDQAASVLGDLSGKKIVVLGASYRGKVKETAFSGVFPTVDILAKAGADVSVHDP MFTDEELGKFGFKAYHIGDPVDGALLQADHPEYAELTPADLPGIKVLVDGRHVVDPAVWG DVEVIVVGDGEA >gi|302034478|gb|GL383157.1| GENE 257 271027 - 272286 369 419 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3160 NR:ns ## KEGG: HMPREF0675_3160 # Name: not_defined # Def: O-antigen polymerase # Organism: P.acnes_SK137 # Pathway: not_defined # 1 419 1 419 419 634 100.0 1e-180 MTGRPEYSGSFLDKIVEGLLVLLPPAALLGPWAGSGRVFGYRILVVLLVGCAVTGWIYPI WVRRFSRAACAIVVVAVAWAVTGVVGAMRLGPRRDLSSLMGAGLALAGAWSVARLISDRH IRRERALRDVAIGWAVAVWVGAPLAVWEILTARHLGTYADGAWRNHPGLYRQPATWLTNP NLYAVFLAVGSVWVGVVGVRSATRWVRIAAIATAVTGLGLLLATDSRIVYAALLLAVMVR LWAVRRWRWVLPGVVMAVVVVIVVTHLHQAGLVWHRFIGVLIHHNDEGPSSFAVRTTLLA WGLALVMEYPLLGAGPGGYRANILAAPKRWFPHGKSDPHNGILEIASQYGLVVTALVAVC WCLAIGRCWRSRRWWGAALITAMPVLSLANSTYLVQSVNQLGWLVCVLAASSSRQETPQ >gi|302034478|gb|GL383157.1| GENE 258 272405 - 273520 455 371 aa, chain + ## HITS:1 COG:PAB0973 KEGG:ns NR:ns ## COG: PAB0973 COG0438 # Protein_GI_number: 14521660 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Pyrococcus abyssi # 127 358 151 389 390 96 30.0 6e-20 MRILIVGAASSIHTVRWVNGLVKRGHEVHLASVHPVGRHSIDSRVRIHLAPHGGKAKYVV NAGWLRSVAAGVQPDIVNVHYATGYGLLARLAHIDAPTLLSVWGSDVYDSPRANPLMRHM VRSNLVSATRIASTSHCMARVTRDLVNKPISITPFGVDTEILTPPDRRRDANDGDGVVCI GTIKALHSKYGIGELIRAFSRVHDERPNTVLRIWGGGPDENPLKVLARRLVPDGSVEFRG AIDHSEVRDALGSLDIFAALSTLDSESFGVAIIEAGACGLPAVVSDADGPAEVVEDGVTG LIVPRGDVIASATALMQLVDDVELRRRMGGAGRHHVVETYSWERSLDLMELAYRDTIDDA ARQHCSGRHGG >gi|302034478|gb|GL383157.1| GENE 259 273618 - 274691 1089 357 aa, chain + ## HITS:1 COG:PA3148 KEGG:ns NR:ns ## COG: PA3148 COG0381 # Protein_GI_number: 15598344 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine 2-epimerase # Organism: Pseudomonas aeruginosa # 1 350 1 353 354 301 45.0 2e-81 MRVVSIVGARPQFVKLAPVAKAFAAEGIDHKIIHTGQHYDVNMSDSFFAELGIPNPDLHL GVGGGSHGVMTGRMLEQLDPVLEDMDPDWVLVYGDTNSTIAGTLSAVKMHLPVAHLEAGL RSFNRRMPEEHNRVLTDHAADLCLAPTEVAMGHLADEGLASRAVLVGDVMTDVCLQVRDS VLANPRPVPGVEVGEEYVMATIHRADNTDDPKRLVHILDALGSLDRKVILPVHPRLRARA ESDGFTVARGNLTTIDPLAYPDMVNAVTNAAGVITDSGGLQKEAFLLGTICTTVRTETEW VETVENGWNVLDPDAEHLGEYATRPHPEGDPGYPYGDGKAARNVATVLLKAGERDRS >gi|302034478|gb|GL383157.1| GENE 260 274691 - 275812 730 373 aa, chain + ## HITS:1 COG:PA3149 KEGG:ns NR:ns ## COG: PA3149 COG0438 # Protein_GI_number: 15598345 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Pseudomonas aeruginosa # 7 371 1 367 373 187 32.0 2e-47 MANSSRLGRVVSLSTVHHGHDNRVFNKEAKALVAAGHDYHLVISADRDGIDQGVPVVALH REEGRVRRLVVSQREAWRHLQALQPEVLHIHDPELIPLALVWRWRHHCKVIYDAHEDLIG QVDTKPYLGAVTRPLAKMAARGLVGLAERSADAVVAATPTVGERFRRAAVTVVRNYPWLG NYTVPPKPVPGQLVYVGDLSEERKLSFMIEVTRAVRKQVPQAHLVLAGRVLPRCQETVEH AVAEGFVEHLGLVAPTEVPQVLASAQVGLVFLKPLPNYVASLPTKLFEYMASRVPFAASD FPAWREMFDGYGAGIFVDTEDAAATADALSELLADPQRCREMGCAGRRAVESGLNFESQA EALIDLVAGLLEG >gi|302034478|gb|GL383157.1| GENE 261 276035 - 276982 350 315 aa, chain + ## HITS:1 COG:no KEGG:PPA0150 NR:ns ## KEGG: PPA0150 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 315 27 341 341 599 99.0 1e-170 MRNLGERLDRRGVARIYRHSYVRGQADRAVARGEAVRILPGVVAASAVARDPRIIIRALL LWHRDIVLVGKAALIMLGMKAPGTTRPMDFYGVKDVEAFSTTRCLTRPGIRVRRWHIPHW FITEREQIRIATAEVSVLILAIQGEWGWVCEALRQRVVTPESCRQARKSLTGRYPKTKVD AALADICLAAWSIPELEMGRVLRATGITGHKPNHKVRVGDRYYYLDRAFEAEKVALEIDG RSVHGTIDGFEATMMRSAHLDRHGWKVLHVTPIMFREDPRFVLDWLASHLHRRHRPKTMF TEFALRRIMSGAAPA >gi|302034478|gb|GL383157.1| GENE 262 277326 - 277613 328 95 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3165 NR:ns ## KEGG: HMPREF0675_3165 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 95 4 98 98 144 98.0 1e-33 MSKPEVNPEEINKGTLVAVAVAAVAVIGIALIAMRKGPKDRKTGSQDPSLFENLATRKPS GGRVTQRRDPRADGHATPMGGTGRVSTAPDFYSYK >gi|302034478|gb|GL383157.1| GENE 263 277619 - 279001 1331 460 aa, chain - ## HITS:1 COG:all2964 KEGG:ns NR:ns ## COG: all2964 COG1252 # Protein_GI_number: 17230456 # Func_class: C Energy production and conversion # Function: NADH dehydrogenase, FAD-containing subunit # Organism: Nostoc sp. PCC 7120 # 27 428 6 421 442 224 35.0 4e-58 MGINNLLSDIGLPGLGCKPVLTDSKPRVVIVGAGFGGLAAAEKTAEAGCDVTLIDRNPYT TFQPLLYQVATGGLNPGDVTYRLRSFAANNGPHTHFRRACVTGIDTENRIVEVDNGDPIS YDYLVLSQGVGANFFGTPGAAENSYTIYTRASSLRARDAIFTYLEDLDTQRDKTFDVIIV GGGPTGVEMAGTLAEMKSIGIPAIFPDVSTDRVHVTLVEMANHLLMPFDPALRHYTRRQL QKRGVDVRTNTAIAEVREDSVLLKDGQTLPADMVIWAAGVGAHKSVTNWGFEQGRGGRIA TDGTLLVEGQDRIFAVGDGAINTEDPKPQLAQPAIQGGECVARQIVHLELGEPLEKFEYN DKGTMATIGRNSAVVQLSEKLKFTGIGAWLTWVTLHIFTLLGGRNRLQAMINLGARYIAF HREAGAIVGDVLSEEGKENMNKNALRDDDEKGAKPIDGKE >gi|302034478|gb|GL383157.1| GENE 264 279128 - 279775 409 215 aa, chain + ## HITS:1 COG:no KEGG:PPA0154 NR:ns ## KEGG: PPA0154 # Name: not_defined # Def: MutT/NUDIX family protein # Organism: P.acnes # Pathway: not_defined # 1 215 1 215 215 384 98.0 1e-105 MPHLHTQPHGHDVTISAWILRQFPSDGVRRQQWKALVHKHRKMNLWIQPGGHVEHTENPW QALAHELHEETGYSIDQLSVLQPWDRLPDGIHDLMHPTPVLLNTHSPYPGHFHSDIVMAM VAHGDPAEKPRPGESQELQWVSPDEFATLPGAEPDAVMIMTMIIERVADSWLAIPATSWS LADAPAEAMTDRSVAEATAPDPLDDRETLGWGTAQ >gi|302034478|gb|GL383157.1| GENE 265 280048 - 282273 998 741 aa, chain + ## HITS:1 COG:Cgl0142 KEGG:ns NR:ns ## COG: Cgl0142 COG1643 # Protein_GI_number: 19551392 # Func_class: L Replication, recombination and repair # Function: HrpA-like helicases # Organism: Corynebacterium glutamicum # 11 734 34 713 717 453 42.0 1e-127 MHGESTTTRDTKVEFVTTGVLLRRLLSDPDLTGVDAVVLDEVHERHLDADLVVAMVCEVA QLRDDLTIVAMSATVDSSGWAAFLGGVEPAPVVEVASALHELEVEWAPAAGAAVESRGVS REFLGHLGTVTVDALDRHTEGSALVFVPGAREVDHVVADLRSRLAGIDVVGLSGAMSARE QDHALSDPGNVRRVIVSTAVAESSLTVPGVRLVVDSGLSREPRLDRGRGMAGLVTVRESR ASAVQRAGRAARLGPGVAVRCLRAQDWAGMNADPTPEVDHADLVASLLSLAVWGSPRGEG MALPTPLPQDRVAAAEEELRDLGAVDAEGRITVRGRHLATFPLDPRLARALTDGAAIVGS RRCAEIAAMLGLEDGQVDLVGQWRQLRSGRHPEAVMWRREADRLARLINDVPPTDITDDD AVATVVSLARPGWIARSRGEGSASYLLACGTGVDLPRNCPPGLLGQPWLAVARTSRITSG ALIRAAVPLSESAALESGEAMLTSDTTVTWDGGKVRGRRVLRLGAIELSSTPVRPDPVRA RHVALEAVRSGGLDVASLTKNGESLRRRLALAHRVFGDPWPDVSDEALLARAEEWLDLDA LAAGRGSDATSGLRGLLGWRESARLDEVVPETITVPSGSRIRIDYPEPGSDTSPVLAVKL QECFGWADGPTVCDGRERVVLHLLSPARRPLAVTDDLASFWASVYPAVRVENRGRYSKHP WPEDPMTATPTKRTNRALRGN >gi|302034478|gb|GL383157.1| GENE 266 282581 - 283210 779 209 aa, chain + ## HITS:1 COG:Cgl1054 KEGG:ns NR:ns ## COG: Cgl1054 COG4721 # Protein_GI_number: 19552304 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 10 193 16 201 201 84 36.0 1e-16 MTNDKLTVRYRTIDIVTPVMIAVAFGVIFLGYGAVYSLLKPATSVYLPIEGILSGIWFLP ALLAGLIVRKPGAALLSEVLAATVEAALGGPWGAGTLISGVVQALPMELCLLVVAYRKAG PKLVLVAGALTGFAEAIYERISYYPMFRFGDTIVYFVFMIVSGALLGGLVAWGIVRGLAA AGALSPFAVSRELRGGKSPRSTTSSRNLS >gi|302034478|gb|GL383157.1| GENE 267 283207 - 285306 1256 699 aa, chain + ## HITS:1 COG:Cgl1055 KEGG:ns NR:ns ## COG: Cgl1055 COG1122 # Protein_GI_number: 19552305 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, ATPase component # Organism: Corynebacterium glutamicum # 34 447 21 445 446 200 32.0 8e-51 MTDVLAYADHVDEVSSRRAVPVDVEELTVGVPDRDEPILGPIDLHLAAGSRILVSGPSGA GKTTLLHAVGGLLEEESYDLTGRVNTWSGDVNVGLLQQEPIHSVVAATCGRDIAFGPENH RVPREDIWSIVEDSQRRARFTMPMDHSTTKMSGGQMQRLAIAGILATNPGLLLLDEPISM LDEESATAIRDEVARMAHDRTVLVVDHHPDQWRGVLDQVVELTDHGTLKKIWDFEDFLDS REATSLPPHTSIAGEVVASTSSLDAHRPQSDDVLLRGVTMSARRGHITVLSGPSGVGKST LLRLLAGLDVPASGELTLPDQTAWVPQNPENYLVARTAADELFASPMVPENADLRDLVRT FGLKPFLDSHPMTCSGGEKRRLAIAAAVAQLPDLLLLDEPTVGLDDDRGVSVLSAIRAAA DSGVAVVVSSHDRQVIAMADEVVDVASYRVPDPTPNERPGEKPAFLTTINPLVVFLIAIA GIFGSLFVRSPLVGAMGLIPAAVMAPMCSRRVKPLVVRTVPVLIAAVMLVWTTLLLHSGF TDPSAWSEATRQGLRILVFVLPGALASAAIDPTRLGDALAQQTHLPQRPVVASMAGVVRM GHLGDQWHIQSDVRNLRGLGPKRSLSSRITYLSSMTFAMVLYAMRSSEVLSRAMDSRGFA TATRRTYALESRWHARDLWGVVLAAFVVAVPALAAVLFG >gi|302034478|gb|GL383157.1| GENE 268 285319 - 286536 1226 405 aa, chain - ## HITS:1 COG:RSp1009 KEGG:ns NR:ns ## COG: RSp1009 COG0438 # Protein_GI_number: 17549230 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Ralstonia solanacearum # 25 358 9 357 417 141 32.0 3e-33 MPGRVSVRPNPGGKMPQRKVSVINHYAFPPGSGGITRNFDMFSRLRGWQPHFYAANINHT SGERMTVDDPRYTLVPIPEYKGNGVKRVLGWVAFAAGAGARALVRPADVIFASSPQILSP AVGMVVAALRRKPFVVEVRDLWPESLVSGGALKEGSALHKVLQGLEKTIYAHARQIVVVT KGWEDHFRELGINVDKVTVVPNGADLAEYEVKESREELRKEYGISGFTAVFSGTHANYVG LDLIVDAARRLPDVNFLLVGAGARKQWAIDEVAKLRLTNVTFHDQVPKSELVRILSACDV GLHTVSPQSVFDKGMSPNKLYDYMAAGLAVVSNAKVPIRDVISDDEVGACVDSTDLVAGI ERVRDADEATMKRWHERARELMANKYSLQASVDKLARVLEKALYR >gi|302034478|gb|GL383157.1| GENE 269 286587 - 287006 354 139 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3199 NR:ns ## KEGG: HMPREF0675_3199 # Name: not_defined # Def: DoxX protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 139 1 139 139 257 98.0 1e-67 MSRPSHFTAPSPSKRHPLRTLSRLGVGGLLAYAGVGHLTFVREEFQAQVPDWVPVDDDTV VWLSGTAEIILGAALLSGRHKKFWGRSAAAFFAAIFPGNVGQLVEHKDGFGLDDDRKRAI RLLFQPILVGLALEGTRED >gi|302034478|gb|GL383157.1| GENE 270 287573 - 288580 886 335 aa, chain - ## HITS:1 COG:sll0744 KEGG:ns NR:ns ## COG: sll0744 COG0167 # Protein_GI_number: 16331972 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotate dehydrogenase # Organism: Synechocystis # 3 327 2 327 343 281 44.0 2e-75 MSDLHTKYMGLTLKSPLVASAGPIQQKVDGVKALADAGVGAIVMYSLFEEQVRHEEARQA EIELEYMDSFAESLSFFPTVASNEGGITERYLAHLEASANAVDIPVIASLNGATNGGWVD TAKRMEGAGAAGIECNIYMVPGDLEQSAEEVEDRHVEIVQAVKDAVSVPVAVKLSPFFSA LGNMATRLDAAGADALVMFNRFLQPDINVETMQVEPGVWLSSPADARLPLTWIAALSGRI GASLAASSGVESAADVVKYLLAGADVVMTTSALVRHGTGYATELQKGLESYLPRKEVNLD TLRGMLAVPNDASTAEYERNGYVAALEKAKTTYGS >gi|302034478|gb|GL383157.1| GENE 271 288604 - 292218 3520 1204 aa, chain - ## HITS:1 COG:alr1911_1 KEGG:ns NR:ns ## COG: alr1911_1 COG0674 # Protein_GI_number: 17229403 # Func_class: C Energy production and conversion # Function: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit # Organism: Nostoc sp. PCC 7120 # 2 418 7 418 418 533 60.0 1e-151 MANSSDSRVRTIADGNTAAASVAYRCNELCSIYPITPSSPMAETADEWSAAGRKNIWGDI PTVMEMQSEGGAAGAIHGALQGGALSTTFTASQGLLLMIPNMYKIAGELTSTVFHVAARS LAAQGLSIFGDHQDVMACRQTGFAMLCSSTVQECHDLALISQAATMHSRVPFMHFFEGFR TSHELNVLEMLSDDDIRHFITDDLVHAHRERALSPAHPFIRGTAQNPDTHFQAREAANKY YEKVPSIVQSLMDEFAQVVGRQYHLVEYHGDPEATEVIVCMGSGARTIEHTIDHFNARGH KLGLVELHLFRPFPVAEVVKAIPETARTVAVLDRTKEPGSNGEPLFLDVLAALSEAYSRG TRNSMPIVSGGRYGISSKEFTPGMVAGIVAELELESPRPRFTIGIDDDVTGISLPWEPLD IEDPTTIRAVFYGMGSDGTVGANKNTIKILGSDPNTYAQGYFVYDSKKSGSKTTSHLRFG PKPIEAPYLVSQAGFIGIHAWGILKSMDVLTMAREGTTVLLNSPYAVDEVWDKLPDTMQR QVLDKHLDLWTIDALSVARKVGLRNRTNTILQTCFFAISGVLPKDEAIAKIKDSIQKTYG KKSQKIVEMNHAAVDASLEHLHQVKVPDQMTANHSLIPAVREDSPEFVKNVTARMIEGFG DLLPVSALPDDGTYPAGTTKYEQRTLSDVIATWEPNACIQCGNCAFVCPHGVIRSKYYPQ SQLEGAPESFQSAELNAAGLPESCYTLQVVPDQCTGCGLCVEACPAHPVGEPDRKAINLE EHLDKTVQRENVKFFETIPVNDRSRVDFATVRGTQFLEPLFEFSGACSGCGETPYVKLIT QLFGDRAEVANATGCSSIYGGNLPTTPWGKNASGRGPAWSNSLFEDNAEFGLGMRMAANV QTELARRRLQEVSSQLDPEFVEDLLHAPQLTEHDLQSQQHRVKELQTKLADMEQTPAVRD LMSVADHLLRRSVWIIGGDGWAYDIGSSGVDHVLASGRDVNVLVLDTEVYSNTGGQASKS TPLGAVAKFASAGKPTAKKDMALQAIAYGSVYVARVALGADPQQTLRAFREAEAYPGPSL IIAYSHCIAHGYDLRNGLDQQYKAVHCGHWPLMRYNPVLADEGRNPFLLDSPKPDETWRE YTKLELRYRMLQKAHPEEAERLLDLGQRQVERRYAEYAEMASRTAENFAVDARMSEFAAS SNRA >gi|302034478|gb|GL383157.1| GENE 272 292234 - 294021 1489 595 aa, chain - ## HITS:1 COG:PAB1214 KEGG:ns NR:ns ## COG: PAB1214 COG0493 # Protein_GI_number: 14521926 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Pyrococcus abyssi # 53 441 51 475 475 243 37.0 6e-64 MSAETMTSDTTDPNGYVIRENQDITARPDLARTTGRVTPTRTRRPVYLDMLPPCNAGCPA GENIQEWLRLIKAHEEEKAWRQLTADNPFPAIHGRVCYHPCEVACNRADLDGAVSIHSVE RYLGDLAIEKGWTFTRPTEPSGHRVLVIGAGPAGLSAAYHLAMLGHDVEIHDAGDKVGGM MRYGIPEYRLPREILDAEVARLTDLGIKIVLNHPVNDLMEEKAKGRFDAVFVAIGAHLSK RVDIPTVDASRMVDAVSFLHNVAAGEKPLIGRRVAVYGGGNTAMDAARVAKRLGAEESIV VYRRTAEQMPAHAEEREEAEREGVQMNWLRTITDVGDDLTVEVMELDEDGKPHGTGRYEK LEADTVILAVGQDADTSFLHKMPGMRFRNDVVDVNPSTLMTDVPGIFAGGDTVPSERTVT IGVGHGKRAARQIDLWLNRESGYPTAKNTTVGFNDLNLWYFGDHLRRHQPELDPTQRVGF DEVVGGLTDDQAHFEAGRCLSCGNCFECDGCYGSCPEDAIIKLGKGHRYEFNYDKCTGCA TCFDQCPVHAIEMIPEGTDPATVQGSGNPTPGWAVRPEPNPQRSASLKFTVDSEN >gi|302034478|gb|GL383157.1| GENE 273 294300 - 294617 240 105 aa, chain + ## HITS:1 COG:Cgl1190 KEGG:ns NR:ns ## COG: Cgl1190 COG0011 # Protein_GI_number: 19552440 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 1 102 17 116 117 101 53.0 3e-22 MIVAFSLVPSGGRASREDGGVADAVAAAVRVVRDSGLPNHTSSMFTEIEGSWDEVMDIVK RATEAVAQYGTRVSLVLKADIRPGRTGEMTAKLERLQGELDKQHN >gi|302034478|gb|GL383157.1| GENE 274 294639 - 295412 454 257 aa, chain - ## HITS:1 COG:Cgl2852 KEGG:ns NR:ns ## COG: Cgl2852 COG2186 # Protein_GI_number: 19554102 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Corynebacterium glutamicum # 37 250 9 223 231 93 34.0 5e-19 MTQTRDAGSSRPDPHAGHQASVTHSSTASKSGGFSVVMRHIDDEILAGRWVNGSRLPPER ELAASLSVSRGAVREAIRALEAQGILSSGTGRSNGPRVDARPSDAMGRILRLQLALDVVS FADLTETRIALEKAACAAAANVRAPVPLTRATDLLVQMHDAMQPDSFNALDTAFHVALAE AGDNRLMRDLTVAIREAVHLPILEAEHSLIGWEQWRDGLVCDHQEMLAAIENGDSERAAK VTEAHIRNTYNTLLIDR >gi|302034478|gb|GL383157.1| GENE 275 295795 - 297483 1794 562 aa, chain + ## HITS:1 COG:PA4770 KEGG:ns NR:ns ## COG: PA4770 COG1620 # Protein_GI_number: 15599964 # Func_class: C Energy production and conversion # Function: L-lactate permease # Organism: Pseudomonas aeruginosa # 4 548 1 548 562 298 36.0 2e-80 MVLLQTFTPSANPLGSQWLSALLAVLPVLAMLITLGALRWKAHLAGLFSWCVALLVAITA FRMPIGMAFSSSVQGFLYGLFPISWILLGAIWMYQVTVISGRFDDLRRTFFLISDDPRVL GILIAFCFGGLLEALAGFGAPVAIAAAMLIAIGFGKLRGAITALVANTVPVAFGAVGLPV LMAAKTGGLDVAMVAPVTARVCAVLCLVVPFLMLAIMDGRKGVRECWPFGLFVGVVFGVT KVIVGGTPVYNLTEIFAAVVTVALSLLFLKVWKPKGGREAAERIGIPIDPTVEIESVEAQ EVDTSDLTGSRIFMALVPYILVIVVFGIAAIPAVKDSFKAADVKMAWPGLSGLMTAGGEA AAHQAYTWQWLSQPGFLLAIVAILVGFIYRVPLADVTKELWINAKKMKFSMLTIGLVVAL AYVMGDSGQTLALGMFIAGAGAVYPFLAPILGWIGTYVTGSDTSANILFSGLQSSVGQQV GAGSYLGMESMRHLLVGAGASGGVVGKMISPQSLTIAATAIGLAGGESVILRKVFKFSII LLVLMCIIVGLMSTPVLGWMVP >gi|302034478|gb|GL383157.1| GENE 276 297538 - 298332 714 264 aa, chain + ## HITS:1 COG:DR1907 KEGG:ns NR:ns ## COG: DR1907 COG0247 # Protein_GI_number: 15806907 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Deinococcus radiodurans # 21 262 1 242 247 288 57.0 7e-78 MTTTTSPGARATSPGLPGAGMTVGLFITCINDVMFPQTGVAVTTLLERLGCKVEFPRKQT CCAQMTTNTGYFDEGIPTVRQYVRAFGDYDYIVAPSGSCVAAVRDQHPMLAEYAGDSGLA KEVEHTSQCTYDLPEFLIDILGVTDVGAYFPHRVTYHPSCHGKRLLNLGDRPYDLLRHVR GMTLVDLPMAEQCCGFGGTFCIKNPDMSAAMANDKARHVRETEAEYVVAGDNSCLMNIGG VLSRQNSGVKPIHIAEILANTEED >gi|302034478|gb|GL383157.1| GENE 277 298336 - 299871 1234 511 aa, chain + ## HITS:1 COG:DR1908 KEGG:ns NR:ns ## COG: DR1908 COG1139 # Protein_GI_number: 15807655 # Func_class: C Energy production and conversion # Function: Uncharacterized conserved protein containing a ferredoxin-like domain # Organism: Deinococcus radiodurans # 34 369 13 343 347 402 58.0 1e-112 MGTELRRVTYGNHGVARLTPAPDKPGTYMGMPKFSKAVKGELNLSVQRKNMRNATTTIRN KRAMRVSESPDWQDLRDAAESIKNRVGRHLDHYLVEAEKNLTANGVHVHWARDGEEANRI VAQIAKDKGVDEVVKIKSITSQETDLNEYLEEQGIAAWETDLAELIVQLGHDRPSHIVVP AIHRNRAEVREIFLHEMKNYGRPAPEDISENPPELANAARLHLREKFLRAEMAVSGGNFV LADTGSLVIVESEGNGRMCLTLPDTLVSIVGIEKVLPSFDDLEVFLKLLPRSATGERMNP YNSVWSGVTDGDGPQEQHVIFLDNGRTDVLADTLGREVLRCIRCASCINICPVYERAGGH AYGSVYPGPIGAVLNPQLRGVEHPVDRGLPYACSLCGACNEVCPVKIPFTDILLKLRNKV VKSEKADRIPQDYEVAGEMGLMKTASWAFSDHKHFEAIQVGSRGVGRVLRGKKMGPVPVP VAERWLKYRDVDAPPADTFRTWWKKNRQEQR >gi|302034478|gb|GL383157.1| GENE 278 299868 - 300548 660 226 aa, chain + ## HITS:1 COG:DR1909 KEGG:ns NR:ns ## COG: DR1909 COG1556 # Protein_GI_number: 15806908 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Deinococcus radiodurans # 1 223 1 211 212 163 44.0 2e-40 MTTISTDPVARTEILARIRRASTDITNSDPVADVPIEWEYGTGIDMDDVVGTFVEKVIDY KATVVRVKGADVPQAVVEGLRSTGAEHSAVVPVGLDKSWVEAIKTAGFDARLDDPQLSKK ELNDTDAVVTGAACGIADTGSIVLTHVEDQGRRAITLVPDRHVCVVKASQVVSDVPEAIQ IVKPAVHEGHPLTFISGGSATSDIELSRVDGVHGPRRLYVIVVDDR >gi|302034478|gb|GL383157.1| GENE 279 300616 - 300936 179 106 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3210 NR:ns ## KEGG: HMPREF0675_3210 # Name: not_defined # Def: ABC transporter, ATP-binding protein # Organism: P.acnes_SK137 # Pathway: not_defined # 13 95 4 86 252 151 95.0 1e-35 MRRSMQPGLFGCFRDVPVRSATMIIDDVTFSYRRHHEVLHGVTVELAPGRTVLLGPNGAG KSTLFSLCSGSRAPTSGRIGLAGVAEASSRTLRQRESELLLRAVAT >gi|302034478|gb|GL383157.1| GENE 280 300894 - 301091 216 65 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313764827|gb|EFS36191.1| ## NR: gi|313764827|gb|EFS36191.1| conserved domain protein [Propionibacterium acnes HL013PA1] conserved domain protein [Propionibacterium acnes HL025PA1] conserved domain protein [Propionibacterium acnes HL059PA1] conserved domain protein [Propionibacterium acnes HL063PA2] conserved domain protein [Propionibacterium acnes HL005PA4] conserved domain protein [Propionibacterium acnes HL050PA1] conserved domain protein [Propionibacterium acnes HL050PA3] conserved domain protein [Propionibacterium acnes HL067PA1] conserved domain protein [Propionibacterium acnes HL027PA1] conserved domain protein [Propionibacterium acnes HL002PA1] conserved domain protein [Propionibacterium acnes HL037PA1] conserved domain protein [Propionibacterium acnes HL078PA1] conserved domain protein [Propionibacterium acnes HL059PA2] conserved domain protein [Propionibacterium acnes HL046PA1] conserved domain protein [Propionibacterium acnes HL030PA2] putative membrane protein [Propionibacterium acnes HL097PA1] conserved domain protein [Propionibacterium acnes HL087PA3] conserved domain protein [Propionibacterium acnes HL083PA2] conserved domain protein [Propionibacterium acnes HL087PA1] conserved domain protein [Propionibacterium acnes HL025PA2] # 1 65 1 65 65 105 100.0 1e-21 MFQRSWRNAFLALVGWLVAGFIVVKITDALTHGTHWWLYIPFAVIGLASAVIHVATARSS SSDSR >gi|302034478|gb|GL383157.1| GENE 281 301111 - 302160 481 349 aa, chain - ## HITS:1 COG:no KEGG:Arch_1539 NR:ns ## KEGG: Arch_1539 # Name: not_defined # Def: hypothetical protein # Organism: A.haemolyticum # Pathway: not_defined # 275 349 19 89 89 97 66.0 7e-19 MRLNLESTQSLLNCDTDPVTFSAMASIRPSLQIPFACLTTVCLLATTTPAPAHSTTILSA DDSAALTRSAAASASVAPTTYREFFSDSSTTASTAQDTERTEVRASNSGNSITHFSNNES FSVSLPGSSSNVTRSSDSTVATLGDDARSDNFALAITTPAEGEATVHSILLTESAPQTFS YTFHNITRISSDGHGGADLFYADSNDELVQVGHVERAWARDAIGRPVPTHYEIHGSKLTQ VVDHRSGGYTYPIVADPSWSEIWSAIKHGGSKVASAAKWLGSKAGWVVGKTWSGVKVMAP KGLKAGKFLAKKVGPGAVVLCAAGAGWAWYRSDAHGWVRVGDAVSGCLF >gi|302034478|gb|GL383157.1| GENE 282 302246 - 303850 1364 534 aa, chain - ## HITS:1 COG:BS_cydD KEGG:ns NR:ns ## COG: BS_cydD COG4987 # Protein_GI_number: 16080924 # Func_class: C Energy production and conversion; O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components # Organism: Bacillus subtilis # 22 519 17 529 575 193 30.0 6e-49 MNARTTQLLKTLLRDVPRGRWLLVLSTLLAACASGASVALMGVSAWLLSRAAEMPPVLYL EAAAVGVRFFGISRGVFRYAERLVGHDLALRMQGALRMRVYDRLSRTTLLGRRRGDLLVR VTADVDAVLDMVVRVIVPACASSLVIIGTTVLLARFSLASAAVLLLSALLAAVVMPAITQ RLSRAADSSLVPLRGQLADRTRELAHCAPDLVAYGAQDAILADVLEVDSRLRTAEKRAAW GRGLGTAGQILAAGLAVVSALWIGGNAVADGRIGGRILAVLVLTPLALHEVFGAFTGAAQ THTRAMAALQRVAEVLDAPQVGVGDSPTAAASEEKPSLVIEELTVGWPGDQPVLSNVNLQ VAAGESVAIVGRSGIGKTTLAATIMGLIPPLAGTVTTTGRVRYLAQNAHVFATSISENVR IGCKEATEDEVLTALSRAGLAIPPRRVVTEDGSSLSGGEAQRLALARVLVNHGTPADPAT HDLLILDEPSEHLDVETSEALMSDLWATTGGAAKVVITHDPLVMARCDRVWEVG >gi|302034478|gb|GL383157.1| GENE 283 303847 - 305160 174 437 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 228 419 7 194 305 71 29 6e-11 MPSGTLISLMTTGLDALDGYYSKYLPQLVLAVIVPVVLATAIGLNDLTSVVIVVVTIPLI PVFMALIGWRTEAAVAKRFKVATRLANHFADLVAGLPTLQVFGRARAQLEGLRRTEAANR SETMRTLRISFLSSFVLELLATLSVALVAVTVGFRVAAGGMDLRTSLFILILAPEVFLPV RQVGGLFHDAADGMAAAEVSFGLIESGRPTAPKSDVEIASPREVPVVISGLTHTYEGTDR AAPDGLSLRIEPGSVVALVGHSGGGKTTALSCVLGFIDPDSGSILVGDRELIGADESVWQ SWRRQLAYVPQVPAMMAGTVAENIRLGCSDAPEAMLRDALDRCGAAAIPLNKRIDDDAEG LSAGERRRVALARALVRVEQAEAGLLVLDEPTAGLDADTEATVLEAVRASGASVLVVSHR RNIIAAADVVVDLEVLA >gi|302034478|gb|GL383157.1| GENE 284 305491 - 306564 1203 357 aa, chain - ## HITS:1 COG:lin2865 KEGG:ns NR:ns ## COG: lin2865 COG1294 # Protein_GI_number: 16801925 # Func_class: C Energy production and conversion # Function: Cytochrome bd-type quinol oxidase, subunit 2 # Organism: Listeria innocua # 13 346 3 330 337 230 42.0 3e-60 MLPVLETTAHSPLTIVWFVLITVLWVGFFFLEGFDFGVAMLLPFLGRDDKDRRLMVNTIG PTWDGNEVWLLTAGGATFAAFPGWYATMFSGLYLPLLLVLLGLIVRGVAFEYRSKNPSSS WRNAFDWMATIGSFLPTLVLGVGFANFVRGLAVGPHSTPDGGTAPLVTTSFWGLFTPFAL IGGILFVVLFCAHGANFVALKTMGDMHDRARKTSAKLGWIATVVALVWALMFNIMYVTRD GRQVLTWIICLLVVVLLAAGSAVVAKGREGLAFLCTALGIALMIVACMFAMYGNLGYRPS GIAFDMWIASATGRTLKIMTISACVFVPIVLAYQVWSYWVFRKRLTREAIPDTAVAA >gi|302034478|gb|GL383157.1| GENE 285 306577 - 308097 1585 506 aa, chain - ## HITS:1 COG:MT1659 KEGG:ns NR:ns ## COG: MT1659 COG1271 # Protein_GI_number: 15841078 # Func_class: C Energy production and conversion # Function: Cytochrome bd-type quinol oxidase, subunit 1 # Organism: Mycobacterium tuberculosis CDC1551 # 1 506 1 485 485 394 45.0 1e-109 MDAQLIARWQFGITTVYHFFFVPITIALSMLVAVMQTVWLKTRNDRYLRLTKFYGKLFLI NFALGVVTGIVQEFQFGMNWSEYSRFVGDIFGAPLALEALVAFFMESTFVGLWVFGWEKL PKGVHLACIYLTAIGTMISAVFILAANSWMQNPVGASYNPVTHRAELTDFGAVLSNPVFK ATFVHQISSSYTVAGALIAAIAFWHLAKVARGRTTSQISDAEEVESVRTWRWASKFGAWV LIVACVGVVLSGDYQGKVMTDAQPMKMAAAEAAYQNTSDFSVLTIGNKDGSEEVWALKIP GMLGFLGNGKWGSQVKGINELKSYQVHEYTYHRKDGSQTPLQASYQNVLRQKIDANGIKL EPNVPLSYWTFRIMITLGMIGGLIGLVMLIAMRGGRNPKPHGWLTFFMIALPLLPLFAIS FGWIFTEMGRQPWIVAGVLPTTAAVSPNVSAGSVLFSTIAYTVVYGILAVVEVGLFWKAL KEGLPELSTRDQPVTEGEDTPLSFAY >gi|302034478|gb|GL383157.1| GENE 286 308297 - 309802 1238 501 aa, chain - ## HITS:1 COG:L138484 KEGG:ns NR:ns ## COG: L138484 COG0531 # Protein_GI_number: 15673681 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Lactococcus lactis # 55 415 34 388 466 124 28.0 6e-28 MAEVKNSQLTAHNDTDMAKDQTKVLQRTLNRFDIVFLIVSAVVGLEMLGSVSAEGPETFT WLVFLIIVFLIPYSLIFAETGSAFVGEGGVYLWTRRAFGRPAAAVTSVFTWITQPVWVGG SMAFLNAEAARNHLVHFSAGSAGDYLFKLAFIWLTVFAAILSLAKAKWIPTAGAFFKISF LCLFLVTAAVYAAQHGVQPLGLGNFSPTLRGFITLTPLLLFAFLGFEGGSSASGEMRNAQ HDVSVSVLRSATMAGIFYLLPVATILLVLPPSDIDGVSGLLKAVNTVFSVYGPAAEPMMA LALVMFTLANIGQGAAWMIMSDRMQAMAAADGSFFGGFFGKFHPRLGTPVHVNLLSGIVS TLFMLAAMELTGSSADLFNVVLGVAVTTYLFSYLLIIPAAAKLRLSEPDVERPFRAGPNW FFILMCVVTTTFVAFGSWVSIFPGTLEALVGMPHDFSKAQGVSYASFEALTLGTLAFIIV MALIGYWRGAPLRRAGISTES >gi|302034478|gb|GL383157.1| GENE 287 309913 - 311913 206 666 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 428 648 8 229 245 84 29 1e-14 MTGKDAQQAPTRNEQAEIARASSQQGHRGSQVAEKPISFGPSLKRLLGQLKPHRITLTIV VIMAAISVAFNVIGPKILGRATDVIFGGIVGKQIGKHIPAARGMSADTFINTLGKASHGG DRGKIITLLQQYPHVVIGSGIDFHRLGVIIGWALGLYACAALLMFLQGFLLNTAIQRSMY DLRRQVSAKLDKLPLSYFDGQPHGELMSRMTNDIDNVSQTLLQTLQQLLNALLTIIGVLI MMFWISPLLAVISLVVIPIAGVIAGLIGKRAQGQFAQMWKATGELNSWVEEAHSGHALVK TFGRSRAVAQEFHERNEELRQATTKAQFVSGLIQPVMFLLGNANYAIIVLIGCLRVAKGQ MPLGNVQAFIQYSRMFTQPITQIASMANLLQSGVASAERVFQVLDADELSTDTHGSLPAT KGRVVFDHVRFSYTPDKPLITDLSLVAEPGQTIAVVGPTGAGKTTLVNLLMRFYEIDDGT ITLDGVDISAVPRAELRSRLGMVLQDTWLFSGTIHDNIAYGCPEASEEDILDAARAAHVD HFVHTLPDGYDTIIDEDGSNVSVGQKQLITIARAFLAAPDLLILDEATSSVDTRTEMLVQ EAMANLRKGRTSFVIAHRLSTIRDADLILVMEHGDIVEQGSHSELLEHQGHYYELYQAQF AAASHE >gi|302034478|gb|GL383157.1| GENE 288 311910 - 313646 229 578 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 330 560 125 354 398 92 31 3e-17 MLAKLVTRHLRAYRLHVAVIIVMQVCAQIAALTLPTINADIINKGVVTADTGYVTTHSLF MLAIALGQTICQVIAVYLAAQVAMGTGRDIRDAIFTRTLDFSAREINKFGAPSLITRTTN DVQQVQMLVFMTLAMLIGAPIMMMVGIIMAVRADVSLSWIIMVAVILLAIGAGLIVSRMG PLFKRQQKRIDDLNRVVREQITGIRVVRAFARERHEAARFDATSSSLRDIQVNVGRTMAA MFPLVMLIMNLSQIAVFWFAATRIDDGQTEVGILASFTTYLMLILISVMMAVMLIVMWPR ASVCANRIEEVLHTSSSLTIDPEPVMALPDAPTLLEFRDVTFSYPGASEPVLHDISFTLA RGTTTAIIGSTGSGKSTLVNLIPRLVDVTHGQVLVNGTDVRRYDPETLWSCIGLVPQRPY LFGGTVASNLRDGRCDATDKELWNALHVAQSDDFVSHMDGKLEATITQGGTNVSGGQRQR LSIARALVKDPHIYIFDDASSALDVATNSRLRAALEANHGDAAMLIVAQRVSTIRNADQI LVLDAGHIVGRGTHDELIKSCPTYLEIVDSQLSIEEAA >gi|302034478|gb|GL383157.1| GENE 289 313918 - 315027 747 369 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3220 NR:ns ## KEGG: HMPREF0675_3220 # Name: not_defined # Def: DNA-binding protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 369 1 369 369 688 100.0 0 MSEDMREIGERIKSRMPEGMTQQSLAEAMEMTPDALSRMLNGKRGITMTELGKAAEVLGA SAHWLVTGHKDPYAMRFAARHTYDFDTHRHINEGREKDREVLDHIAEVYRAAHGSLRASS VVLPKTAKQMREALGDGFVNDFAARVKEVLDVDVMKRSGLSTDYSLCIVGRRVVVLNKQF WARTTWSLAHELGHLVQGHLDRDGDIAGEADEKQANAFAAELLLPEKWMRNFNWPALTRA DVARMVWEAKVSAAAMRVRIETLRLKASDEVREALELTTPKLLTLARTSAAERYRDVFVP DWSPTVIAALLEETEKGNADPMLTSRVLGVPVDDIDFPEPPSEEEMVERYERTMLDRRRR DDGAGESAL >gi|302034478|gb|GL383157.1| GENE 290 315234 - 315743 237 169 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313764814|gb|EFS36178.1| ## NR: gi|313764814|gb|EFS36178.1| hypothetical protein HMPREF9567_00451 [Propionibacterium acnes HL013PA1] hypothetical protein HMPREF9589_01766 [Propionibacterium acnes HL059PA1] hypothetical protein HMPREF9612_01014 [Propionibacterium acnes HL063PA2] hypothetical protein HMPREF9597_00721 [Propionibacterium acnes HL005PA4] hypothetical protein HMPREF9598_02232 [Propionibacterium acnes HL050PA1] hypothetical protein HMPREF9600_00307 [Propionibacterium acnes HL050PA3] hypothetical protein HMPREF9608_01625 [Propionibacterium acnes HL067PA1] hypothetical protein HMPREF9609_01842 [Propionibacterium acnes HL027PA1] hypothetical protein HMPREF9613_00581 [Propionibacterium acnes HL002PA1] hypothetical protein HMPREF9620_00665 [Propionibacterium acnes HL037PA1] hypothetical protein HMPREF9590_02241 [Propionibacterium acnes HL059PA2] hypothetical protein HMPREF9592_01239 [Propionibacterium acnes HL046PA1] hypothetical protein HMPREF9602_01048 [Propionibacterium acnes HL030PA2] hypothetical protein HMPREF9581_00625 [Propionibacterium acnes HL087PA3] hypothetical protein HMPREF9579_00703 [Propionibacterium acnes HL087PA1] hypothetical protein HMPREF9588_00812 [Propionibacterium acnes HL025PA2] # 1 169 1 169 169 325 100.0 8e-88 MVIRKETFTNLHGCDDVVYAGKDVKSAGSGPTPRTLKQSTAGFRHRSPITVGENELNAKH GGPSLKMHRLHLLQLESHVIHQMHTRLIISVNAPIHFGPRQPSLTRFLHSAILENLHEFS GQSAPFASLGHIYGNCTDEEIDIAAVAIFANTHFSVRGGHNDPAPPREQ >gi|302034478|gb|GL383157.1| GENE 291 315876 - 317408 1645 510 aa, chain + ## HITS:1 COG:MT3705 KEGG:ns NR:ns ## COG: MT3705 COG1190 # Protein_GI_number: 15843211 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Lysyl-tRNA synthetase (class II) # Organism: Mycobacterium tuberculosis CDC1551 # 5 508 2 502 505 481 51.0 1e-135 MSSDTASSQSPDVSEQMQVRLDKRARIIADGGQAYPVDLLRDHTLVQVRQKYTDDTGELT LAPGEETTDEVTVGGRVVFVRNTGKLCFASLQDGFTETSNGERLQIMLSKAEVGDESLAA WKSDVDLGDHVWVRGRVVVSRRGELSIMAAEWRMASKALRPLPTLHKELSEESRVRRRYA DLVVREESRQMVRTRAVITRAVRRALDERGFLEIETPILQLVHGGAAARPFNTHLNAFDI DMSLRIALELYLKRTMVGGTDRVYEMGRVFRNEGIDSSHSAEFSMLEAYMSWGNQFTIAE VIKDIIMAVADALDVHQIETPKGTIDLDGQWRWVSVYPGLSEKLGREVTLDTPLEELQSI AAEHEIEIDQSWEAGKVVMELFGELVEPGLINPTFVCDYPAIAQPLARPHRDDPRMVEAW DLIIGGMERGTGFSELVDPVIQREVLTKQSLAAAAGDPEAMQLDEDFLEALEFGCPPMGG LGLGVDRLVMLFTNAGIRETILFPLLKPEH >gi|302034478|gb|GL383157.1| GENE 292 317447 - 317728 307 93 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3223 NR:ns ## KEGG: HMPREF0675_3223 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 93 1 93 93 174 100.0 1e-42 MPESKVRPQAKKKAQAKNRATMDERRAEKKAAPVDRSWVPKVFVPLFLLGVLWLIVYYIA GNQIPGISNLGDWNILIGMGLMAAGFGVATLWK >gi|302034478|gb|GL383157.1| GENE 293 317850 - 318680 578 276 aa, chain + ## HITS:1 COG:Rv0012 KEGG:ns NR:ns ## COG: Rv0012 COG3879 # Protein_GI_number: 15607154 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mycobacterium tuberculosis H37Rv # 67 275 46 256 262 105 37.0 1e-22 MSDDNDPDDVRPDDASVDIDEDRSQATTDPSIQDVRSDSRHPRLARSASVIVMALAGLMM TTAAINSRGHDLRPERDTDMATLVRSQASHNAALQKEAAGLRAQVEDLSKANQTPGVTSS VISSASALAPSVGLEAVSGKALRVTLDDAPLSENPDGVDANMLVVHQQDIQMVVNTLWSG GAEAMTIQGQRVISTTAVKCVGNTVVLHGVAYAPPYVIEAIGDLNAMQKALDTSEAVRIY KEYVSAYQLGWSVERAGQVTMPAYTGAVAVSHATPR >gi|302034478|gb|GL383157.1| GENE 294 318771 - 320669 1545 632 aa, chain - ## HITS:1 COG:Rv0014c_1 KEGG:ns NR:ns ## COG: Rv0014c_1 COG0515 # Protein_GI_number: 15607156 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Mycobacterium tuberculosis H37Rv # 1 450 1 426 428 332 45.0 1e-90 MSAESWLSGRYELQNLIGRGGMADVWKARDHRLGRDVAVKKLRTDLASDDTFQARFQREA QSAARLNHPNIAAVYDTGETKDPATGLPVPFIVMELIDGHTLRDVLRDGRKILPRRALEF TQGVLDALSYSHAAGIVHRDIKPANVMLTREGYVKVMDFGIARAVADTSATMTQTAAVIG TAQYLSPEQARGETVDNRADIYATGCLLYELLVGRPPFIGDSPVSVAYQHVREVPAPPSS LDAEITHQMDAITLKALAKDPADRYQTAKQMRDDIDRLLSGREPFAMQNYADSEADTEEQ THLIPAAATDPVPATAAQQDEASPASAESPQEPEEPHRKRWPVIIVTIVVVVLLALLGFG LHKIFNSSSQPSPAPTPSRTVKMVKVPAVTGLSQQGATSTLENAGLKVQVDHVQKDQATA NQVVSQSPAANEKVPAGSDVKITVNDGPKQLTIPRNIVGLPKNDALKALKDAGFSDSQIK ATNDDPKTEPNSAKAGAVDAVSPGAGTTLTPDQQVTLTIATGKSVVPNLKGMSVEEANSA AGSSGFSISVERQVTSSAAPGTVFDQDPDYGAIANRSTAIKVLVAVAPPAPEPTREPPTN SAPSEEPSSSSIAPVPPAPTTAVPTTSSSSGR >gi|302034478|gb|GL383157.1| GENE 295 320716 - 322143 892 475 aa, chain - ## HITS:1 COG:ML0018 KEGG:ns NR:ns ## COG: ML0018 COG0768 # Protein_GI_number: 15826881 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Mycobacterium leprae # 1 473 1 486 492 288 37.0 1e-77 MNRQIRAVSLLAGLMFLALMVNLTGSAMFRQASLNNDPHNVRVRDAEFSQNRGNILVGSR PIATTTSSNGKFAYQRVYPSGPKYAPITGYYSYYYGRSMLEQTQNAQLTGTSDAQWLSRI TGTLSGHKPEGGSITTTINAKAQDAAWDGLRGKKGAVVALDYTTGAVLAMASSPSYDPNE LASHHLNDTTRAWKNLVADPSSPLTNRATREIYPPGSTFKLVTAAAALQNGYHPNSMVDS PENWILPGTRTPLTNETNCGGSRITLAHALDISCNTAFGKVGVSLGQDKIRDQAERFGFG KVVNSDVSSAASRFPQNLTDAQLAQSSIGQYDVAASPLQMAMVTAGIANGGKLMTPYLTA QVRASNLQVVSEHHPKQMSQPMTKESAEQLKAMMVSVVNNGTGKRARINGTTVGGKTGTA QTVKGKAPYAWFVGWSDNPHVAVAVFIQSSDTAINEVSGGRLAAPIARDVIEAMR >gi|302034478|gb|GL383157.1| GENE 296 322140 - 323531 1300 463 aa, chain - ## HITS:1 COG:MT0020 KEGG:ns NR:ns ## COG: MT0020 COG0772 # Protein_GI_number: 15839391 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Mycobacterium tuberculosis CDC1551 # 18 441 18 447 469 340 44.0 3e-93 MSIGQEFDDGTVVIQAKRRWTELFMLLIAWAIGFGGWVLTELNINHVLPDTWTTVGGVWL AVAIVAHIFVRFVIPYADPVILPIVFTLNGLGLAMIHRIDYIPDPHYHRMDAQTLWTALG IVLFVATLLILRDHRNLQRYPYVLFIVGLVFLMLPLVPSLGMATLGSRVWIHVGSYTFQP AEVSKVVLAIAFAGYLVDNRDVLSRAGHKILGITLPRARDLGPIAVMWVATMLVIVYQND LGTGMLFYGMFVVMLYITTERVGWAILGAVSFLGGAVLAYTCFGHVRVRFDSWLHPFSNY TQNYQIIQAQFGLAWGGLAGRGWGLGRPGMVPLAWSDFIATSIGEELGVTGLMAVIVLFF ILTARGMRTSLGCRDDFGKLMVAGLSFTLALQVFAIIGGVTRLLPLTGLTTPFMSQGGSS LIANWVIVAIIMIVSHRNRKPADDFTATVPAPDPQQAITGGTR >gi|302034478|gb|GL383157.1| GENE 297 323528 - 325015 891 495 aa, chain - ## HITS:1 COG:ML0020_1 KEGG:ns NR:ns ## COG: ML0020_1 COG0631 # Protein_GI_number: 15826883 # Func_class: T Signal transduction mechanisms # Function: Serine/threonine protein phosphatase # Organism: Mycobacterium leprae # 1 247 1 237 237 181 43.0 3e-45 MAFSLDIRCHSEIGLVRRNNQDSGYVSPRMLVVADGMGGAAAGDLASTVAVRHVAKADRR FSGEGSPARPQGEEMLTVLSGAVADANDELADLVAWDSSLEGMGTTFCGAMFSGTQLGIV HIGDSRGYLLRQGRMKRMTHDHSWVQSLIDDGRITPEEAAVHPHRSLLLKVLNGQPQHIP DTQIVDLRLGDRILFCSDGLCGLVNDDTIGEHLNTTNLDDVVDLLTTDAHAGGGTDNITI VVAEVVEADPNLDASEPHIIGAATTRKVPEHEVTAPLPLDQPASATNNDGKSTVLFDSEA EESMRYAPVDSMTRHRRHWLWPVVILAFVAVVVGGIFGARAYLNTQYYVGTDDDTVAIYQ GSPDNLAWIQLSHVTEKTNIKTADLPRYYRDRVLGNIRVSSMDSAHATVAELRTGAQQCK VIREAATAPPPTKPATPPSTPPQPSASGPTANAHHTPQPSAVPTPAMPTPTSAMPSPSAA GHEVDLPAVTSGDCQ >gi|302034478|gb|GL383157.1| GENE 298 325019 - 325507 239 162 aa, chain - ## HITS:1 COG:Cgl0046 KEGG:ns NR:ns ## COG: Cgl0046 COG1716 # Protein_GI_number: 19551296 # Func_class: T Signal transduction mechanisms # Function: FOG: FHA domain # Organism: Corynebacterium glutamicum # 1 156 1 150 154 92 36.0 4e-19 MSEFLVTLLRIAYLAILWIFILFVTNVIRTDIYGHRVPRNAGEAAVESGRRSKGRRTRRR EPAPIPTGLQVISGSRAGTFVPLANGVTVGRGNDCTLPIDDDYASTRHAEFSPGIDGAWF VEDLASTNGTHVNGERIENPTRLSVGDEVRIGRTTMTVTGRR >gi|302034478|gb|GL383157.1| GENE 299 325510 - 326199 573 229 aa, chain - ## HITS:1 COG:no KEGG:PPA0189 NR:ns ## KEGG: PPA0189 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 229 1 229 229 437 100.0 1e-121 MGFLDKVEKSIEGAVSGVFARAFRGEVEPVEIAGRLQRELDSEAQILSRDKSLVPNDFVV RLSSRDYERLVPYTKTLNAEIIPTLRDHASERHYVFNGPIHIRYDLDDALPVGKFTVLTG ENHAKAVSDRRAPLVLEVDGVRHPLTPPGLTIGRGSDADIRINDPGISRLHARINVWPQG NDIGLSIEDLDSTNGVTVNGVKVTSTELGDGSRIEIGSTRMLVHSPTRI >gi|302034478|gb|GL383157.1| GENE 300 326371 - 327414 646 347 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3231 NR:ns ## KEGG: HMPREF0675_3231 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 347 1 347 347 595 98.0 1e-169 MHLNLGLAKTINRATHVTRGFRRIVMVTAAGEGRPGRLVADLTNEFSRRGIDVSQLPIEG SEDTASSMPAPAHKVLAKWSRHRQGTARHELVESLDHQCALIVTDPRRLDEIVGLQAQSN RPVVVLLATDPDNAPDKLPEIVDVVVTPNPQTEPWEHLGVPVHSIGVPATGGSPAPGDRP NRIALLGPCTDEQLADALLAFDHACQVVPGWSLEICLDDESRARSAVAARRDVGIHPAGS ENTVMNQSELALVMTRKEDLASRILDAAGAGLPAAAYADTPAAADILSRCGYPAAGELSS ALAQGMADAPLRRIQREYVAEVLADHAGAKIGEAWLDLMFNVGRSHH >gi|302034478|gb|GL383157.1| GENE 301 327488 - 328450 604 320 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3232 NR:ns ## KEGG: HMPREF0675_3232 # Name: not_defined # Def: phosphotransferase enzyme family protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 320 1 320 320 602 99.0 1e-171 MKPSRVRWDQLPDSVHHRVAEILGSPVSVDHVQTHGTTPGVASRVVTADGSHAFIKIGHP AINEAIPSLNRREATLLSLLPDTAPAPRLLGRIDVDGWVGMVTSDIEGPHPDLPWSDEDI DTTLASLSRLTEVTADFHQQWEPFSARLQNTPSVWEQFMADTPTDLDPWLIERLPDLAGR VERLARHAYGDTVIHNAVRSDNVLLRTSGTVLVDWSHAVIGPAWVDAAGLIVDIIHTDPI DAPRWNRADDLVKRVAAEFSPSTHGGPAVEPIVDFLVAILGLSERECRNPDPAGMPQFRE FQRERASRLRAWLWASEHLA >gi|302034478|gb|GL383157.1| GENE 302 329044 - 329745 400 233 aa, chain - ## HITS:1 COG:no KEGG:PPA0192 NR:ns ## KEGG: PPA0192 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 233 1 233 233 461 96.0 1e-128 MFIDNSAGPREFGPNDDASLELPAEGAYRVQEALRVMGWDPHHPRVFSQAKGLVPVWLPL TAEITWGMLSIFLSNSDGIRDSIGGWFCFIFFLGTPVWILSDVTLRRYGVDYDKIWTRFG HLFYHQIRFTDITRFDIGGHRYKIWAGKTKINIDYHRYDYALVHLRLAEELHHRHIQLPQ ANITDPNWDQEAQIWRNILAAYAYREHRDFYDTHPEQLAHLNALTPPPHHYDN >gi|302034478|gb|GL383157.1| GENE 303 329755 - 330666 621 303 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3234 NR:ns ## KEGG: HMPREF0675_3234 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 303 65 367 367 491 99.0 1e-137 MHHITDPISHWWATHKDRILSRDFLIGAGLVIGGIAVAATGVGGPLLAAAISGGLISGGF SASSQKYATGDVNWGTVSKEALIGFVVGGVGAGTTNLVGTQVLKHSDTAAAAITKFSVRD EVRFAQTGLKGILNANTAANNALKLAAKSGDLDALETMYIHHFAGSAASNFAASNTQYIM DTAMSHDKHFSASGLAQANGNAIFGVVLSARGNAMARPNISFNNGCFKRGPALLTDTMGV KQQFSTFGHELVRGAIADATTQEISTAMNGQDPHDFADGFSKKTAHTLGNAAHTSFPGLH TSK >gi|302034478|gb|GL383157.1| GENE 304 330707 - 335470 2397 1587 aa, chain - ## HITS:1 COG:RSp1137 KEGG:ns NR:ns ## COG: RSp1137 COG3209 # Protein_GI_number: 17549358 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Ralstonia solanacearum # 597 1375 445 1198 1517 149 25.0 4e-35 MVDFSIFGDYQNPVEFNFSTAEGFSSQLRWTSQRINIFYARTPRVESIAAREFRGFFATV FAQNMQVCSADAEALSEALTAAADIVDYLTEQARLENERRQKVRDFAAQHDDFSDHVRDF FTGVDVPPNLTPAEPPPPQLLRLPLTRQRQQDRSIRGSSGGISAADPKDLISAAQVLGEA AAQVPSGSVLAGWFDDFTSQCKYGTVEVGDLFVQLDRWRGLNDGDVEWLHAVAKAFQAAG SGVITLPNSALRAALRAAGTPLWRTDLDITSPGLSGIDPRTGYLEDPINSATGNFIEPET DLAFAAASSPLVLSRMYNSIQAVRGQGGVFGPGWVSILDQCLLVKPGCVEWVREDGRHIA FAVEAAPTAVLPTTNQLPNPAEEDEKPVEQWRAQGENLWLSRVSASQLPEFLRDPATSKW VWVISDNRGGRWVFTEGGAWVCSGSSQRDVVHTVREGDRVTAMETSWGYRISVSYDGTKV MSAVSSDGRRCRYSYDDQERLVQVDRPDGSRRYEWDDTLITTVVDACGNAECINSYDDRG RITSQQATNGRTIHFRYLPGGVTAASDADGTNANTWICDAHGRTTGVVDAHGGQVSMAYD SFGNMVRCVDRAGNVTSHRYDQRGRLTHTDLPTGATIDCSWDGLDRLVSTTLANGAQTTF EYDGTERDPVRVTDPCGGVTVAEWKDGLLLRATNPVGVSLRFSYDHHAELVRVEDAHGEA SRLIRDEAGRIVETISPGGATTRFSYDDAGRLAAVVTPDGATWEHRYDVAGHLIELVAPD SGVTKWEYHPDGQISRVIDPLGRVIEHSYDHLGNLAGMQLPDGSAWSFIHDALSRLTQVV APDEARWTYAYDVDGNLSGVTDPAGFARVFTDGLTASTASDSHGHQLHRVDADPYGLTTA VTDVTGAQQIVTRDLCGRPVEFQDESGAVTHVERDLAGRIVALVSPTGLRTSYSYDACGR MVDVTDPAGRVTRYSYTSDFQVATVTDPTGETARYEYDAMGRVVLSHVPGAGVSQYRYDP CGRLVFSCDLVYGQRHFSYDLAGQLVAATNSAGGVSRYGYDRCGRPTRTWDPVAGTRHFR YNTAGRLITAVDPAGGVHRYTWDKRGRLVTTTDATALTTYRYNQLDQVVESTDPAGGTHR YTWNPAGRLTSHTGPDGTTTSYDTRDGVETVTIDGQVSTRRWWDFEARQLHIDDHSDPAV PVHHTISVDVRGLVCDHTTTDGDGKVISRHHWDWDSEGRLTRANDTHATVSYTYRGDGLP TQITHSALGAASLAWDSAGRLTDVTTPNHHDHWDHDGGLVCGYAHDGRVTRVARDAQGRV TGIEGPSGCWSYGYNEAGSLINATGPRTQHNWTHDTYGRLTSHATSGTDTTFTWDQEGHL AQTCTRAHGHATATQYRYDAAGRRISATSPDGQEERYSWDGRGWLSGITTDATTVSTHVD ALGRASRITTGDQQVRVDWDLVTGAPTSIDGHPVLPLPGGRILGATPIGDTNLWREVMPT DPDNPYQPATVAIEGVPETIRMAGNALVVDSHPWWGARLYDPTTTTTFLSPDPLTSPAGA LWANNPYDYANNNPLTPHRSSRDPPRH >gi|302034478|gb|GL383157.1| GENE 305 335590 - 336381 504 263 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3243 NR:ns ## KEGG: HMPREF0675_3243 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 24 263 1 240 240 419 99.0 1e-116 MSCRKERVYFSEHKSKRRKGDHRMTKKLTKTCLLGMVGIMAIGLAACGDKTNSSSDTPAN PSPSTKAVKRISKDDFTKAFSHKKIDGHTFVIQDNSQLRPVVDNLDKTLSQAKISPAGCD AALRQSSLGLTSNEISDTLVAVSDKPSTRIIVTTAMSDRQKKAYKSQEEQTSKCGHTTLS TQGVNHGLEINIKASPIKGYENISKQAALFDVSIKRSTGTSDHGYQAYIWLNNDQAIRIF GRDAGIVKSTLQSATKALGIAKK >gi|302034478|gb|GL383157.1| GENE 306 336682 - 337047 312 121 aa, chain - ## HITS:1 COG:Cgl2072 KEGG:ns NR:ns ## COG: Cgl2072 COG1188 # Protein_GI_number: 19553322 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) # Organism: Corynebacterium glutamicum # 3 116 10 124 126 95 46.0 2e-20 MTRIDVWLWSVRVYKSRSLATAAVKGGHIRLNGDPIKPSHDVKPGDTVTIHTPGWDRVLK VVNPITKRVGAKLAVEAYEDLSAPRPAYLSAPLARRDRGTGRPTKKDRREIDRLRGRDSR Y >gi|302034478|gb|GL383157.1| GENE 307 337330 - 337686 352 118 aa, chain + ## HITS:1 COG:no KEGG:PPA0203 NR:ns ## KEGG: PPA0203 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 118 8 125 125 215 100.0 4e-55 MDDQRRIITTDRAGSIWAGITWCSLLLFIVAGIIGMMAQTMLPANLGYPQLHDSGVPTWL TWTVVGLDVVAFFIPPLVTTSCGRKAKRLGHPVRSAVQISWATFTVVTVISFLLVFFG >gi|302034478|gb|GL383157.1| GENE 308 337754 - 340627 1668 957 aa, chain + ## HITS:1 COG:ML2335 KEGG:ns NR:ns ## COG: ML2335 COG2812 # Protein_GI_number: 15828258 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, gamma/tau subunits # Organism: Mycobacterium leprae # 108 550 1 443 611 447 54.0 1e-125 MDERAPEPGMENEAVEPEVFEQDGPDLFGDEESPRPVMPPDEATPDDDLPSDPRDPGLLD GPETPEEPDGLQTDEDEEDGADVIERVRELIGEAPDSNPDDDLPELPLALYRRYRPETFD EVIGEDHVIEPLKRAILNNRVNHAYLFSGPRGCGKTTTARILARALNCEQGPTPTPCGTC QSCRDLACGGPGSIDVIEIDAASHGGVDDARDLRERAFFAPVHSRYKIYIIDEAHMVTPQ GFNALLKLVEEPPPHVKFIFATTEPEKVIGTIRSRTHHYPFRLVPPKVLVEYLAELCGKE GIDVDHAVLPLVVRAGGGSVRDSLSVLDQLLGGAADGHVSYEQAAALLGYTPEALLDEIV DAFAAGDAHQVFATIDKVIEVGQDPRRFAEDLLRRMRDLVIVSAVPDACRSGLIDVSPEQ ATRLTHQVAGFGAGELTRAAEVLATGLTNMRGTTAPRLHLELMCSRILLPGADTDGRGIH ARLERLERRIGVSGPVEEVERAERPVTAQPPTRYADTPQQASPPQHWPAENLQNPERRSA PEHHDAPSPGQRPSGRPRPSRKDYRPGNQLAEQPPSNQHGDDGQMSQGPRQQGGPSTSQR QQPRPQDHQPSQRDRQDSPPAQPQQPSAEQGGRADDAINITTLRREWPQVLEAVKDGGRV AWMVLNQYAQVLEVHGNQATLGFSNIGARENFAAGNYPKVLHDAVVKVLGVDLAFTAVVG EPPAAVRPESHPAEFQSGPAAQEPPDDDPWEQGPHHQDSTRGGEPSDPTHPGRDPQGRPG DRQAISDDASKDAPPPPVTSSHPSEAGDDDPAPDATTEDQSADVRDEVVESGPVAGAPDP DSGGAAEPKPDLVPGQDHVEAAGGAESARQIDPGGASSQGRPSAAAVSTAHRWSERAKGS VRPLEVTSRSAQVEEPPDDGGEWDDTVVEESNESPIDLIMRELGGVVIDTDGDSTAR >gi|302034478|gb|GL383157.1| GENE 309 340737 - 341060 296 107 aa, chain + ## HITS:1 COG:AGc145 KEGG:ns NR:ns ## COG: AGc145 COG0718 # Protein_GI_number: 15887449 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 12 104 3 95 107 57 34.0 6e-09 MTTGGFDLGGLDMGALLAQAQSVQNQLEAAQNQLAESNFEGTAGGGLVRATVTGTGELDA LTIAPEALEDTDAETLADLVVAAVKDATGQARAMQQSLMPQMPSLGL >gi|302034478|gb|GL383157.1| GENE 310 341091 - 341696 582 201 aa, chain + ## HITS:1 COG:lin2850 KEGG:ns NR:ns ## COG: lin2850 COG0353 # Protein_GI_number: 16801910 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Listeria innocua # 2 197 3 198 198 236 56.0 3e-62 MYDGPLQELIDALSRLPGIGPKGAQRIAFHILDAPEEEANELADALREVKEKAKFCKICF NVSSDEVCQYCRDPRRDQSMICVVEESKDVIAVERTRQFRGLYHVLGGAISPLDGKGPAD LHIRELCQRLADETVTEVILATNPNLEGEATATYLSRLIAPMGVTVSRLASGLPVGGDLE YADEVTLGRAFEGRLRVGVGA >gi|302034478|gb|GL383157.1| GENE 311 341804 - 342379 517 191 aa, chain + ## HITS:1 COG:Cgl0834 KEGG:ns NR:ns ## COG: Cgl0834 COG1695 # Protein_GI_number: 19552084 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Corynebacterium glutamicum # 1 164 1 166 169 102 38.0 3e-22 MSIKFAILALLAEKPRHGYEIKNEFDRRTNHTWPLNIGQVYTTLDRLERDGLCYRGEETP DGRVIATISPKGREEVRRWFTTPIAPANPPRNELAIKIALAATSKDVDVATLIQDQRHAT MHQLQECRQARRSVAEDDLAGQLLVDGMIFAAEAEIRWLDHCESKAVQASHAHPHQPVEP VTDGSKAVQEA >gi|302034478|gb|GL383157.1| GENE 312 342385 - 343167 275 260 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 20 259 1 234 245 110 30 1e-22 MTSTPLHAADQITPTMQRTVLSLDHVSRSFGEGEQRGDAIVDVSLGVNPGTFAAVMGPSG SGKSTLLGLAGGLDQPTSGTVSVCGEPLGGMSRDDLARVRRRQLGFVFQDYNLVPALTAV ENVSVPLELDGVSATRARKAAEIALERVGVPGLVDRHIEKMSGGQRQRVAIARGIVGDRR VLLADEPTGALDSVTGDEIMALIRTLADEGVAVVLVTHEARHAAWADRVIFLRDGRLVDE SQVVSDPMELLNDNPKRGRW >gi|302034478|gb|GL383157.1| GENE 313 343191 - 345806 1083 871 aa, chain + ## HITS:1 COG:Cgl2500 KEGG:ns NR:ns ## COG: Cgl2500 COG0577 # Protein_GI_number: 19553750 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Corynebacterium glutamicum # 23 463 7 452 853 62 22.0 4e-09 MPTSAVRLSGDAIARGRPHRRLINRLAVRDIGRHKLRSLLIVMLIALPVAIMSGLGVLLR SDGSISGSQALNNYGDADMVISPISNWDGHCSQQGPTNPYCDDGAEPDVRQRTQQQTALA NLTLPGHKLHLLRTTEASVSWRLVTLSATVKAMDLTTMRPYRMEFPRGPMPTGNNIWVTT GAAKDYGWSVGSRVTVNGHRYTITGVVREEWPGNGPTFWVAPRSPLARGGELTYYVNGAS LTRQQVEKLNASGVGVADRRAEESASQGDTFERDMFALILAAGVLSAIVVATIAAAAFAI GARQQRRMLALLGITGAARRDLMGVMIHQGLLLGLTGALLGVGLGVGMGNGAVAIIRMVY PDYITYGVDWGYAAVGSVVGLLAALTACWFPARDVARQDALMGVKHAESAARPARRPTLA IVIAAIGLLAGVGGVIYGRRGTTGDVMVRLNIGIIVTIVVLYLAAVSAMPWLVDKVSGRK SSRLPIRFALRDLNRNRGRAVPGVAASMAITVLACAAVTFCDSLAIQDKAEYVPEFGDHI GVLAGEHDDGVRTSDDRVAGEIKRVTAVFGPHVKYLRPEEPVTCGQDGKYCTSSLEVTPK VPNGAMSSTVAIDDGTLYELLTGEKADGRVMKALDDGVVLFSPDATRISQAIISDHDERH GAGTTVLPAIHAPHHALGYGVPNLISRRTAAKVLGVSPDNMKTQSTTVWLRLPHTPTAKE GDRLQHSLMDVTGSPSEFIWEKGYSDISGTVMRWSAVVGTLLAVCVGAVVLALTLSDSRG SRTAIASVGASKATLRRMVAAQALVTTGLGQILGFLVGFVPVAVMTCVGPRWPMPMPLPW LALIVFAPPVLLALVTMVAVPVPRPRMQRLD >gi|302034478|gb|GL383157.1| GENE 314 345810 - 347645 1092 611 aa, chain - ## HITS:1 COG:Rv3737_1 KEGG:ns NR:ns ## COG: Rv3737_1 COG2966 # Protein_GI_number: 15610873 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mycobacterium tuberculosis H37Rv # 140 391 42 287 292 126 32.0 2e-28 MAEKRPGARSGSASRNHPRSWHGDDPIPRTADGIDARIFRPGQASAQPATPPQSSATPPE PPVDEENPTRMAPVGNLSRSWPLTRSRTVSPHNGQAKLRHSRPPRAHRTRRVSLEKLFRA KTPVEPTLALNLGDAEMAIMQARRVVDLVTRVAVMAISVGGSASEAVAIALRITATYGVT VHIDITNTSVIVTQHRGLDEDPITVLRVVRSRSNDYQRLGELQLLVDDICDKTVGLEEAA DRLAAITRSPRLYRQWFVTMNIGLMGAGLSTLFGGTVMDGVLSFFSTCIVDATVQAMARK RITNFFAQAAGGAIATTFALIVMVYMAASNHPLPLSPSLIVAAGIVSLLAGGSFVAASQD ALDGYVVTSSGRFLEGFVQTGGVILGVITAMWIGLRLGVPGYISPALGFSTNPVLQMVAA AVIAVTFGISSHAGYRTLAICAALGAAAWAGYLLGMQLTGSVSAASGLAAMVAGFIAGLG AKRWKVPQLGLVTIAIVPLMPGVMMYRALYMIVNAQNETGGTSNAGWTLFLEALLVGVAL AVGGSFGALLARPFTLPKDLRSRLATLASWGAGQAVPRERRRRRSQPPADPHHPALNNTE TDPTVTGTWAR >gi|302034478|gb|GL383157.1| GENE 315 347756 - 348556 626 266 aa, chain + ## HITS:1 COG:DR0240 KEGG:ns NR:ns ## COG: DR0240 COG0561 # Protein_GI_number: 15805275 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Deinococcus radiodurans # 2 264 17 281 284 164 42.0 1e-40 MLIATDLDGTFLTPDATVSPRNRAAVKAAEAAGIHVIPVTGRAIGGLRVIGPVFHRHALV SNGAVGTDMSTGETLFTETMSARTVKSYVDQLTAECPGVVFCAEVGDSSVFLVEEGYDEI VPAFESENDPAEHVLVSRKELCSSEAVKLMIVHPTVLASDIYQLSRRLRVPGVHATWAGF TVAEAGPAGVTKASGLERICQLLGEDRAHVVALGDGANDVEMLQWAGVSYAMGGAKPEAI AAADRRAPSCEEDGFAVVVEELLASR >gi|302034478|gb|GL383157.1| GENE 316 348566 - 349375 614 269 aa, chain + ## HITS:1 COG:DR0240 KEGG:ns NR:ns ## COG: DR0240 COG0561 # Protein_GI_number: 15805275 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Deinococcus radiodurans # 2 265 17 281 284 190 46.0 2e-48 MLIATDLDGTLLTPDGAISPRTRDAIRVAEKAGVPVVPVTARQIYGIEKWRDDLGRWALC SNGAICWDLQARTVLFRQLMPGAVANEFAHRLLDAAPGTRFLTIKDDGLTFASQRGYAEL TTFADHSREPSDMPALDLDEVLDGDCLKMVARHPNLPVAELAARAASVGMAGEVHVTTSG KPMLEISAKGVAKDSGLSMLCDHLGIEQRGTVAFGDGANDVEMLAWAGDSYAMAHAVPLA VAAARHRAPSNAEDGVAQVIEKLLAMRER >gi|302034478|gb|GL383157.1| GENE 317 349978 - 350712 187 244 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 2 219 1 224 305 76 25 2e-12 MVTQTLQLEGVHFSYPRCKSRLFTELNLILGDTGPTVLLGLNGAGKTTLLRLCAGELQPS AGLIAVNGGKHPRSVVSLMPQQIRPIPGFRVVEQVAYSAWLGGCSSSQSEKRAIMALEAV QLEDRLKDKPNQLSGGQLRRVGLAQALVGEQPIVLLDEPTAGLDPAQKHVFRNLLTELGA TRSFVVSTHDTSDVDSMYNRVVILHKGRIAYDGSTDEFLMHGAGSSHAAEAAFLDVVGVS EQAR >gi|302034478|gb|GL383157.1| GENE 318 351048 - 351914 216 288 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3259 NR:ns ## KEGG: HMPREF0675_3259 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 288 114 401 401 515 94.0 1e-145 MSLIGVVWMLAWGVVGAVIGMSWPLALAAPTALLIPFILVLYGPAVSVLELRYLVGYYMD CCNVGEMLDPQVLAAGMTMACGVLVVSMVALIASRLRYHSSAIVTVILIIGLVSTVLIGF REVEGVGAFPAVPRTGTQTCLKDPTVCTWDAHDLQLLGPIVQKADAAWRANGVHVPRAYR QGIEQSTQTTVWWSASAEDVSESALPALSAVAEGLAVAPCQVRQDEVEIWVQNVQDRVVA WLVEHSGIKVRDTALSPETREWLKSIDRLPIEKQASIIEHDRARLRTC >gi|302034478|gb|GL383157.1| GENE 319 351908 - 352516 203 202 aa, chain + ## HITS:1 COG:no KEGG:PPA0215 NR:ns ## KEGG: PPA0215 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 7 202 1 196 196 311 96.0 8e-84 MLSGNVLLGWKAWARNRSLLSLLAATVVCCVLIGLTSEVIVAIPPFLTGRGVDVPNAAVV PLCVVIVQGWCLSRRDTRLEAGSERRTALADCLLSTTPAVLVGILAYVGNLPVGMVATRN TVGLSGVTLLANALGVKRLSSLPATIWVLMSLLAGSTASFEAPWSWPVKDRTDVLSAVLS VALCLLGISALLVKPRPWRNRG >gi|302034478|gb|GL383157.1| GENE 320 352793 - 353020 70 75 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|328759430|gb|EGF73046.1| ## NR: gi|328759430|gb|EGF73046.1| hypothetical protein HMPREF9588_00054 [Propionibacterium acnes HL025PA2] # 1 75 1 75 75 130 100.0 3e-29 MYALARSSSDSGVIAPSLPCGRKHLTPTEENCGGSPGTVAMMSLYGIVATTDARNDHHLP KCHTPGNSPGLHVVT >gi|302034478|gb|GL383157.1| GENE 321 353162 - 356485 3046 1107 aa, chain + ## HITS:1 COG:CAC3038 KEGG:ns NR:ns ## COG: CAC3038 COG0060 # Protein_GI_number: 15896289 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Isoleucyl-tRNA synthetase # Organism: Clostridium acetobutylicum # 15 1083 2 1009 1035 820 40.0 0 MTDVNPVRSDNCRQYNNVPPQIDLPAMDHEIIDLWARQHTFDKSLEATKDGQPWTFFEGP PTANGQPGTHHVEARVFKDIFPRFKTMQGFRVDRKAGWDCHGLPVELAVEKELGFSGKPD IEKYGVEPFNAKCRESVTRHVDAFSELTERMGYWVNMDEAYWTMSPSYVESVWWGLKRIW DKGLLGEDHRVAPYCPRCGTTLSDHELAQGYQDDRDPSIYVPFPVTSGPLAGRAKLLVWT TTPWTLVSNTAVAVHPEVRYVVAHQDPVPEGSDAVATASAEDPASQDLIIAEPLFEKVLG EGWSLTGESFLGSQMELWTYERPYNFLEWPKTERVTVDGRPTPADANFVVLADYVTIEDG TGLVHQAPAFGADDLQTCRRYGLPLVNPIRPDGTFEESVPLVGGQFFKTADKPLCEDLDR RGVLFRLEMHWHSYPHCWRCDTHLIYYAQPSWYIRTTKVKEQLLAQNEGTTWYPETIKHG RFGDWLENNIDWAVSRSRYWGTPLPLWRNDDDHSDVICVESLAELSQYVGHDVTGMDPHR PFIDEVTFTRDGHTYHRVPEVADAWLDSGSMPFAQWGYPHVPGSKEKFESHYPGDFICEA IDQTRGWFYTMMAVGTLVFDESSYRNVLCLGHILAEDGRKMSKHLGNILLPIPLMDSHGT DALRWFMAADGSPWSARRVGDETIQETVRKVLLTYWNTVSFQALYARANGWSPAQGTQQD ADPARGSGDSRGFGGVVPPAVTQRHVLDRWLVSATNVLVRDVTEALNNFDTQRVGNLIAQ FVDELSNWYVRRSRRRFWDGDEGALWTLHETLETLTKLMAPMVPFITERVWQDLFVTTNP HGPESVHLASWPVVDDSLIDESLSESMDLARRLVELGRGARAEAKAKIRQPLSRALISGA ALAKLDEDLQAEIRSELNVMALDSFTAAGDLVDHCAKGNFRALGKKYAKATPKVAAAIAA ADPEWLASELAIKGSVELDVPEVEGGKAVVTADDVIVSERPREGWSVVNEQGETVALDLE ITPELARAGQAREVIRFVQDSRKKAGLDVSDRITLAWSASADLAKAIEEHAEQISQEVLA VQMSREPRADDWAVELDLGLAVKVVKV >gi|302034478|gb|GL383157.1| GENE 322 356600 - 357937 728 445 aa, chain - ## HITS:1 COG:STM3238 KEGG:ns NR:ns ## COG: STM3238 COG3681 # Protein_GI_number: 16766537 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 17 442 12 434 436 278 45.0 2e-74 MQKTRCQTPLSPSEINNLIEALHQGVTPATGCTEPIALAYAAARAKRALGSDAKQLDSLH IDARVSPNIMKNGMAVMVPGTGRPDLEIAAAVGALAGNPDAGLAVLADVSEDAAEKARHL VDSGAVELTVADVDDDLYAETVLHLDGHHARACIAGDHTNVFLVSRDDEVPESKERPAAG HVPPTAALLQGLSLAKIYDFATTVDIERIEFITEAERLNSALVDAGRDGSYGIGEGAAIL GSIDRRMASDDLCTRMTAYTAAASDARMGGAPLPAMTNSGSGNQGIVATVPVTVAADYAG VDHERRVRALALSHAVALYAHAGLPVLSAFCAATTAAMGAAAGICLVLDGSYSAVERAVA SMTGDVVGMVCDGAGCSCALKVSASVNSAGRAALLSLAGRRVPGTNGLVHDDVDAAIRDI GRLGTEGMKQTDPEILSLMMAKQTV >gi|302034478|gb|GL383157.1| GENE 323 358001 - 359296 976 431 aa, chain - ## HITS:1 COG:ECs3991 KEGG:ns NR:ns ## COG: ECs3991 COG0814 # Protein_GI_number: 15833245 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Escherichia coli O157:H7 # 11 431 20 443 443 566 73.0 1e-161 MNTLVTVDRPASMTEQEWRKAIKFDSTDWGWIIMSIGMAIGAGIVFLPVKVGLVGLWVFL VSSVIAYPAMYLFQRLFINTLAESPECKDYPSVISGYLGKNWGFFIGILYFIMLVIWVFI YSTALTNDSASFLHSFGVTKTVWSHNPFYGLVVICIMMAIASRAEKILFRISTVMVLTKL SVVTFLGLAIIGSWNLANVGAFPSLGYLVKQTIIMLPFTLTSILFIQSLSPMVISYRAHY RSIEVAHHKALCSMNIAFSVLFITVFFYAISFNLTMGHDVAVKAYNQNISTLAMVAQGMG GTTVKIFSLILNIFAVMTAYFGVFLGFREACQGIAMNVLRRLIPEERINKKIVSWSILVF AILVSWGAILLNAPVLSFTSICSPIFGMIGCLIPAYLVFKVPSLHKFRRPSLILIIATGI LLVVSPFLAFS >gi|302034478|gb|GL383157.1| GENE 324 359332 - 359487 97 51 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLAYSLPCIEQVVVEVSMIIQQGRKGSGTSVTEFGLTSVRTISWRGRGVGE >gi|302034478|gb|GL383157.1| GENE 325 359523 - 360548 977 341 aa, chain - ## HITS:1 COG:BMEII1125 KEGG:ns NR:ns ## COG: BMEII1125 COG0673 # Protein_GI_number: 17989470 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Brucella melitensis # 9 325 13 346 349 183 35.0 3e-46 MDTTTTIGWGIAGTGRIARTILKDFAHVPGARICAIASRSAARADAFADLVTQNLSCPRP DTHDSYVDMITNPTVDVVYVATPHPQHRPIALAAIDAGKAVLVEKSFAATAHAAAEIAEA ARAKRVFAMEGMWTRFLPVVTEMIDAVNNGAIGEPTGIQGDLFALRDYDPDDRLFSPALG GGVTLDLGVYALDFAIRLFGEPTEVIARGNHFPNGVDSDASMLLTFPKNKFATLAISFTS DGPGRMTIQGTDGWIEVEPRFHHPSRILIHRRGVIPEIHNTPALGRGYAHELMEVCQCLR AGRTESLTMPLDDTLAVARTMSRVLDQLGVENYDDTELSHA >gi|302034478|gb|GL383157.1| GENE 326 360571 - 360954 166 127 aa, chain + ## HITS:1 COG:no KEGG:PPA0220 NR:ns ## KEGG: PPA0220 # Name: not_defined # Def: putative regulatory protein # Organism: P.acnes # Pathway: not_defined # 29 127 1 99 99 159 98.0 2e-38 MRYHGPSCSQFDYLVPCQKASVSRTVRFVESNEADDWTLQANCRGMADALFPDGKEQRRA RRICTDCRVRPECLAEALDNRLEWGVWGGMTERERRRLLRERPDVTSWRDVLLADRGTLT KTARVKS >gi|302034478|gb|GL383157.1| GENE 327 360951 - 361124 199 57 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3267 NR:ns ## KEGG: HMPREF0675_3267 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 57 1 57 57 114 100.0 2e-24 MTRWEYFTAPILVHASQQILNNFGADGWELVQIVAGPNPDSLVGYFKRPLPDQEEPR >gi|302034478|gb|GL383157.1| GENE 328 361121 - 361576 435 151 aa, chain + ## HITS:1 COG:MT3779 KEGG:ns NR:ns ## COG: MT3779 COG0251 # Protein_GI_number: 15843295 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Mycobacterium tuberculosis CDC1551 # 1 151 1 150 151 127 56.0 7e-30 MSATTRCAELGITLPPVAAPVADYVPAIQTGSQILTSGQLPFVDGELTAVGKVGDAVSAE QAAEAARAAALNAIAAAADVAGGLDAIKRIVRVVVFVNSAPDFTGQAGVANGASQLLGQV FGEHGRHARSAVGVATLPLGSAVEVELTVEV >gi|302034478|gb|GL383157.1| GENE 329 361659 - 362360 527 233 aa, chain - ## HITS:1 COG:ML2302 KEGG:ns NR:ns ## COG: ML2302 COG0664 # Protein_GI_number: 15828234 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Mycobacterium leprae # 35 232 32 223 224 149 47.0 4e-36 MANVVATAATQPFFATLGAASAARIMAMCEASVCPRNTVIFKAGDSADNLYLVVEGKVKL TRSTTADDLTPRDSLLWLMGPSDMFGELSLVDGGTRSTTATTVTRCSLLKTPGAQMRELV KGRHDVALAMLGRLSERLRRADDNTAHFVSGDVPSRLAYTLLDLARRFGTANPSTGHIVV RHDLTQHELAQAVGSSRETVNKALTDFAARGWIAARPKVVTIMEPEKLASRAN >gi|302034478|gb|GL383157.1| GENE 330 362278 - 363204 390 308 aa, chain + ## HITS:1 COG:Cgl0293 KEGG:ns NR:ns ## COG: Cgl0293 COG0177 # Protein_GI_number: 19551543 # Func_class: L Replication, recombination and repair # Function: Predicted EndoIII-related endonuclease # Organism: Corynebacterium glutamicum # 96 308 38 251 260 238 56.0 1e-62 MAMIRAAEAAPRVAKNGWVAAVATTFAIRTSPLMSTCIVRPFVAGRVPTLWQLSHSVLTP GLDSPPMLSSMAASPSASRPQREDCRACANEVRALLAKAYPDAHCELNYAGPYQLLVATV LSAQTTDRRVNTVTPTLFNRWPGPQALADADIGEVETVVAPLGCGPTRAARLVSMGAKLV DNFDGAIPDDLDSLVTLPGVGRKTANVVLGNAFGIPGITPDTHVMRVSRRLGWTDATTPA KVETDLAELFDPSEWVMLCHRLIWHGRRRCHSRRPACGVCPVAEWCPSFGEGPTDPEEAA TLVREPRR >gi|302034478|gb|GL383157.1| GENE 331 363551 - 364207 356 218 aa, chain + ## HITS:1 COG:ML2299 KEGG:ns NR:ns ## COG: ML2299 COG0494 # Protein_GI_number: 15828231 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Mycobacterium leprae # 27 201 67 255 266 119 42.0 3e-27 MSHLSALIASLGRDDPDFSVGRRPGGGRSSAVLALISEEGNDIVLTRRPLSLRHHAGQVA LPGGRAENTDETIVDTALREAHEEVGLDRRLVTVRGVLPTAHVAASGSDVTTVIATWSGA GTVGVVDPAEVAMVQRVRLADLANPAARATTRHPSGYRGPAFVLPDIFVWGFTAHVLDAL LDRGGWSRPWDRERMVEIPEGYLGARRLPEEMTPNDIP >gi|302034478|gb|GL383157.1| GENE 332 364288 - 364824 628 178 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3273 NR:ns ## KEGG: HMPREF0675_3273 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 178 1 178 178 306 100.0 2e-82 MADKLPVGDTIDNLKTDGQKLVQDSKALVTAEIKPAAKHAGIGVGMFGGAGYFGIVGALL LWLCGAFAFSLMWQHIGNWDILLSLVVGFATMAVVLFILAGILALAGKGQISQVKAPTGI VDEAKSTLTAVKSAVARGKYNATARSSIDASEIPSPAAPVAADGTSAPRRASGATERD >gi|302034478|gb|GL383157.1| GENE 333 364921 - 366183 905 420 aa, chain - ## HITS:1 COG:STM0039 KEGG:ns NR:ns ## COG: STM0039 COG3004 # Protein_GI_number: 16763429 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/H+ antiporter # Organism: Salmonella typhimurium LT2 # 25 396 3 383 388 227 39.0 4e-59 MTDSRKNKRPRKSILRPVTGPNALHLSDIFRNETTGGMLMLAATVAALLWANLGHHSYHF FRELALGPLTIEQWAADGLLTVFFFIAGLELKREFVEGSLSRPADALVPIVAAVCGMVFP AGIYTLFNVLASDGHPAGWAIPMATDIAFALAVLAIVGAGLPQAVRAFLLTLAIADDLGS IIVIAVFFSTGLDIWWLAGAIACIGLWGVMQHFHVDNGWWYVPIFIVGWWCMLRSGVHAT IAGVAFGLLTRTEEDVLDDPVDRWQHKVEPWSAGVVVPFFALMSAGVHVSGKTFLALWTH PISLGIVCGLILGKVIGITLGSCLTARFTSAELGRGVVWRDIIAVAVLAGIGFTVSMLMT DLSFPKNHEFADEAKASVLMASFLAAILGGAMLHHRGKSHAMRQTKHSHEVPVAAGTCND >gi|302034478|gb|GL383157.1| GENE 334 366351 - 367109 402 252 aa, chain - ## HITS:1 COG:Rv3342 KEGG:ns NR:ns ## COG: Rv3342 COG0500 # Protein_GI_number: 15610478 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Mycobacterium tuberculosis H37Rv # 41 230 56 240 243 80 32.0 4e-15 MAVSSAPHLPSGSFEWLTAGRVDPGSRVVVLCPTVAHCRAVASHGADVLAVHRDPDTAEK LNRIPGVMAVCGSPESLPLNSSSFDAVLVHQGFHELAPGLALPEIARVLRPGSVLGVSWL VRDDTVPWVKRLAALLRTVDENAMSGDYGTESVHELISSKYFPEDEHTTKRLWVPVNRDS LVAMAAARPAVRALDSDARSNVLTKVAALADDSAGTSGLRLPYQLECWRAWVDHDELTTP IRPHDDGLTITL >gi|302034478|gb|GL383157.1| GENE 335 367460 - 368296 242 278 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3275 NR:ns ## KEGG: HMPREF0675_3275 # Name: not_defined # Def: CpaE-like protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 278 1 278 278 457 100.0 1e-127 MAGSVMAWGLSPRSGTYVVGFDAEEAARWSAGLSASVIVVPRANQVLTEILHDELATTSR ATVVQVNSSGGGTGVSTLASGLAWAAARSGIKVGLVELNPSAGGIDLLLGIERKDGWRWP ELASARGVTTDLGSHVPSLDGVEVVSAGRVGVHVPPAARRAVVDSLAGDHDLVVVDPGGL DTPEVTVNVKVGVVAADLRSVMTARGQNLPDLLVARRGPGRSMPDEDIESVLGVRPDMTI KDDRRLARGQGDGEAPWVVASRRWRSGCAELVDQVMGS >gi|302034478|gb|GL383157.1| GENE 336 368374 - 369459 535 361 aa, chain + ## HITS:1 COG:Cgl0301 KEGG:ns NR:ns ## COG: Cgl0301 COG4962 # Protein_GI_number: 19551551 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Flp pilus assembly protein, ATPase CpaF # Organism: Corynebacterium glutamicum # 2 345 26 369 377 272 49.0 6e-73 MDVAHAILDCGRVASDKTVLAVVEELRRTSTGAGRLDPLLAMDGVTDVLVNGPNQVFIDR GQGLELTDVTFSGPEEVRALAVRLAAAVGRRLDDGNPWVDARLPDGIRVHAVLDVLARPG TCLSLRVPSRRCLSLDDWVTGGSMAPGCRRMIDTILSRKLAFLVTGGTGTGKTTLLSAML TSLPSDQRLVIVEDSREIWIDHPHWVSMEARAANSEGKGSVTLTDLVRQCLRMRPDRIVL GEVRGAELRDLLMALNTGHEGGCGTVHANGVAEVPARLEALAALGGLSREAASAQITAAL HTVIHVERGERGRRVAEIGVFVDVEGRAVVLPAVRWDADGVMTLGDGAGRLSQLLGMEVA R >gi|302034478|gb|GL383157.1| GENE 337 369456 - 370226 431 256 aa, chain + ## HITS:1 COG:MT3758 KEGG:ns NR:ns ## COG: MT3758 COG4965 # Protein_GI_number: 15843271 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Flp pilus assembly protein TadB # Organism: Mycobacterium tuberculosis CDC1551 # 82 249 90 263 266 64 31.0 2e-10 MTVIGASLLMGLAVWIAMPSATRKQEGRHLPAWSGIPVGFVVAWLLFGASGVVWAVMTVV VGETVLVVVRRQRRRAQILKGGREVARATRALAGRVSVGEIPSVALEHVADDVEVLAQAR RAQAVGGSVSDALIATSRQPGMAGLVPLAHAWHLAATTGAPLAPAAKSVAEGTARRARLE ATLDSELAAARASGRIMGLLPLVGLLMGHVVGAHPTVFLTTTWLGRACLLGSTLLACVGV LWSESLADRVAKEALP >gi|302034478|gb|GL383157.1| GENE 338 370223 - 370510 181 95 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3279 NR:ns ## KEGG: HMPREF0675_3279 # Name: not_defined # Def: type II secretion system F domain protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 95 1 95 249 142 100.0 5e-33 MSDIDVTGTLLPAMIMAAIAAWLVVPATARTRTQARKPPPAWLAPRPGAPASHIRVLAGL VAACAVLIGVPWPFPAAAGLSVLVGTVMWWGSGRL >gi|302034478|gb|GL383157.1| GENE 339 370529 - 370972 313 147 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3279 NR:ns ## KEGG: HMPREF0675_3279 # Name: not_defined # Def: type II secretion system F domain protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 147 103 249 249 244 100.0 7e-64 MEQHRAAQLPEALLMLSSAMEAGLPLRSAVTTVAESLEGPCAEDLRRLASSLAAGVPDSR AWNDLASVEVWRDPAQDVSRAVDSGEGISELLSAHAAQLQVAAAEKTEKKARKAGVDAIG PLVCCHLPAFLLVGVVPIIAGMVLGAL >gi|302034478|gb|GL383157.1| GENE 340 371181 - 371468 210 95 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3280 NR:ns ## KEGG: HMPREF0675_3280 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 95 1 95 95 146 100.0 2e-34 MSENTDPTTEPVISARSLDLVGATDVVEPRHRGRYRAARNKIIDRGMATAEYAVGMLAAV ALALVLLKVVTHQEVFTKLLKLVVSIIGKAGGMLP >gi|302034478|gb|GL383157.1| GENE 341 371558 - 371875 211 105 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3281 NR:ns ## KEGG: HMPREF0675_3281 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 105 32 136 136 151 99.0 7e-36 MVTVEMAVSLIAATLVVATSCWVVGLVVVEDACRTTAAQVARQVACGDTASARQAESNAP TGAKVSTTTSGGWVNVTVQVDRSLGRIGPVHLRGQARSPMEPGQT >gi|302034478|gb|GL383157.1| GENE 342 372049 - 372279 118 76 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3282 NR:ns ## KEGG: HMPREF0675_3282 # Name: not_defined # Def: TadE-like protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 76 60 135 135 129 97.0 5e-29 MAALAAGGAQAIGEPGCPVAERTVKANGAELVSCVVHNTENGSSVTVEVGVQLHRGWELP GMPTRVVKSSRAGPME >gi|302034478|gb|GL383157.1| GENE 343 372374 - 372631 167 85 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3283 NR:ns ## KEGG: HMPREF0675_3283 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 85 1 85 85 162 100.0 3e-39 MLCRDLDMELGRITVIPDAHRTGKLYLYRELRMVPGMAPSEVISAQAAEDDLGQLSVTSL SVNRCESPTWGAELPRVVLGMLQGR >gi|302034478|gb|GL383157.1| GENE 344 372692 - 374713 953 673 aa, chain - ## HITS:1 COG:Cgl0307 KEGG:ns NR:ns ## COG: Cgl0307 COG1205 # Protein_GI_number: 19551557 # Func_class: R General function prediction only # Function: Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster # Organism: Corynebacterium glutamicum # 32 669 105 778 785 492 41.0 1e-138 MAATASATPVVPESPTPGLPASLRDSLHRNSALYLAPTKALAHDQERVCREVGPRDWLVS TLDGDSDEAERRFAREQARYVLTNPDMLHHTVLPSHARWAGLLGSLRYVVIDEAHRYRGV FGAHVAQVIRRLRRLCRMHGADPVFLLSSATSTNAAEAGTRLLGVEKVEVVDEDCSPHPG RDVVLWQPAESISTDATGLVADLADAGLQTICFVASRSLAEVISAHAQDRVTSGARVTAY RAGYLPEDRRRIEARLQDGSVRAVVATNALELGVDISGMDAVVIAGYPGRLSALWQQAGR AGRSGRDALVVLMARENPLDQYLFEHPELLFSSSVESTVLHPDNPYVLGPHVAAAAQEAY LSPADEEFYGSAFAGICKTLTGQNVLRRRGNRLFWTRPERAVDAIDLRSAAGKGIDIIDV STGRVIGGVDEAAADRTVHPGAVYLHQGDQWLVDEYNPVEHHALVHQDLPGYWTQPQSAS TVRILREERRRACGPGYVACGQVELTEQVVGYLRRDEITNDVWDSVALEMPTHTMITQAC WWVIPDKVVDDLKFDAVHLAGAAHGAEHTAIGLLPMYSPCDRWDVGGVSTVMLPDTGACT IVVHDGQAGGAGFAEAGFEKAEEWWHATIMRLAQCGCESGCPACVVSPKCGNANQMLDKA AAAALTAAMDPLA >gi|302034478|gb|GL383157.1| GENE 345 374980 - 376497 942 505 aa, chain + ## HITS:1 COG:Cgl1871 KEGG:ns NR:ns ## COG: Cgl1871 COG2890 # Protein_GI_number: 19553121 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methylase of polypeptide chain release factors # Organism: Corynebacterium glutamicum # 23 423 13 416 509 200 33.0 6e-51 MERSRAKIATMGRHLTVDEIEQLRHIFTDIGYVTDPVMAAIGDSGQLGLTRNSTTPALRA LAGRTDALAGAIRLWLLQQPVPVEQLAPLPLQALTEAGIVSIAGSTARALVDVRPYGSPD DGASGWTVSDLTPGLDKTITKIRPDYVLGVSPASVSLTQMAVPTHVGSALDMGCGCGVQS LHLSRHADHVVATDVNPRALEMAQLTCRLSHADVDIRDGSLYDPCGHDTFDLIVTNPPYV MAPPSRDGQRLIYREGGFCGDGLVEAVVRGAPARLNDGGMLQVLANWAHIGDQPWSERLA TWVEETGCDLWVVEREHLDVCEYIETWLTDAGLDGSAQWRSRYDEWLSYFDNLDVTGVSL GWITLTKAGRDDPDLCFEEWPWQVAQPIGGTMARRAQAVIWAHLSDEDLLARRWRIAPNV DSETTGRPGATDPEHVVLRQRRGLCRAVEMTTASGGVLGACDGELTLAQITDAVSAILEV DHDALLIEVLPLVRECLRYGILETA >gi|302034478|gb|GL383157.1| GENE 346 376590 - 376877 333 95 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3286 NR:ns ## KEGG: HMPREF0675_3286 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 95 1 95 95 175 100.0 5e-43 MTDHQEIPLTETHHCSCGESDTELPELDVRTIPHAIRHGAVIGAFAQLQPGASMVLIAPH NPLPLLSQLEQIGSVGVEYLVEGPDEWHLKLTKQA >gi|302034478|gb|GL383157.1| GENE 347 377100 - 379889 2707 929 aa, chain + ## HITS:1 COG:ML0200_1 KEGG:ns NR:ns ## COG: ML0200_1 COG0550 # Protein_GI_number: 15827005 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Mycobacterium leprae # 5 589 16 608 608 696 62.0 0 MSPTKSLVIVESPHKATMIAGYLGPKYTVRASQGHVRDLPTSASEVPAKYKGEPWARTGV NVDNEFTPVYVVSPEKRSTIRELKSLLKDSDELLLATDGDREGEAIAWHLLDELKPKVPV RRMVFNEITEKAINEAVAHTRKLDTDLVDAQETRRILDRLYGYEVSPVLWKKVLPRLSAG RVQSVATRLVVDRERERMAFTSANYWDMEATLTADLDEFQARLVSLDDTKIATGRDFDSH GNLISSVRRLDEVAATAIAKALEKAPFTVTKVESKPYTRRPYAPFRTTTLQQEAGRKLGF TSQRTMSVAQNLYEGGYITYMRTDSVALSQEAIHAARNQAAELYGSDHIPDKPRIYASKV KNAQEAHEAIRPAGEHFRTPAETGLTGDEFRLYELVWMRTLASQMADAKGETLSVTIDAT PVSPVNLPDGDVTTATFTASGRTITFHGFLRAYVESVDEGASDDAQKRLPQLSKGQDLDP REVTAKGHDTRPPARYTEPSLVAKLEELEIGRPSTYASIIRTITSRDYVFKKGSALVPTW LAFAVTRLLEEHFSNLVDYQFTADMEETLDQIARGNADRVAVLSAFYFGQTKTGDGDVPT PTEGHEGLHQLVTELGDIDARTICTFPLDDSDVVVRVGRYGTYVEDPEGNRANVDDALPP DELTVEAAKELLVSPNGQDRELGLDPHSHRPIVARNGRFGPYVTEVLDDDEATEIVETTT KDGKKRRTKRKVKPRTASFFRSMSLETVTLDEALKLLSLPRVVGTAADGTEITAQNGRYG PYLKKGTDSRSLGSEDEIFSITLEQAEAIYAQPKQRGRAAAKPPLRELGEDPASGRPIVV KDGRFGPYVTDGQTNATLRKDDSVEDITPERAQELLAEKRAKGPAKKSPTKKKTTRKTTT RTTTTKKTTKATSKSVKVTKANAKTSSGS >gi|302034478|gb|GL383157.1| GENE 348 379891 - 381378 796 495 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3288 NR:ns ## KEGG: HMPREF0675_3288 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 495 1 495 495 921 100.0 0 MTTGCRSGSTEPLYFELAWTAARPVPADLRTTVAAGGARRTIECKVTLLDSPDHRLLRSG IVVAHRVVDGLGEWYMDAPEWSPWLPVARSVALDAAGELPQDFTCLVRPFLRGATLCPVA ALSWERNETILEALDCTKLALIRDDRIAVVQSGVTTSRVRELTITPQRGLAEGQREWLTN RILALDGVPVSRHPSVLRRLGPGAGALTDYPRPHLHHGAGLQTWVSAQLAGQLRDVIEAD LAVRCQGMDLGPTETTRTEPRVLPESPDRTDLVGMGYDPVTMSTPSIHDGNHGSIRPLQK AIRALSETLDAMSGLLDQAWVERAQNLCLRVMGLDPGHISIHNLSREYYQLLEEITAAAR SPRLTVDPDQPARPTMKRVLRKSVADAVAKCDDVEDVQGWSTAEVAVRHAAAVAGILDTG RAGKVAKRLRPVVKEIAQTKRSVTEAVDVSKMSPQEAFEAGREVERASASLFAARQSFRD DWQQHRRKILKAIHD >gi|302034478|gb|GL383157.1| GENE 349 381371 - 382015 411 214 aa, chain + ## HITS:1 COG:DR0111 KEGG:ns NR:ns ## COG: DR0111 COG0125 # Protein_GI_number: 15805151 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate kinase # Organism: Deinococcus radiodurans # 13 209 4 202 206 159 49.0 5e-39 MTDQTVTGRDLGGVFVVFEGGDGAGKTTQARLLDQWLTTEGIPHLMTREPGDSWLGQRIR ELVLSPGSGPISSRAEALLYNADKAQHVDEVVIPALREGKVVVCDRYVDSTIAYQGAGRA LDPGEVGQLACWATTGLVPDVTVLLDVDPCEGAGKIAAKDRLEAAGDEFHLRVRQHFLDL AAAHPQRYLVLNARKSRKEISEAIRQRVTGLLNR >gi|302034478|gb|GL383157.1| GENE 350 382071 - 383270 625 399 aa, chain + ## HITS:1 COG:MT3747 KEGG:ns NR:ns ## COG: MT3747 COG0470 # Protein_GI_number: 15843256 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication # Organism: Mycobacterium tuberculosis CDC1551 # 1 388 3 396 404 239 44.0 5e-63 MLTGVWADLVGQEKAVGVLRRAAESQPGRSSHAMSHAWLITGPPGSGRSNAAKAFAAALQ CVDHGCGQCNACRTTLSGAHPDVTLVRTEALSIGVDEVRELVRRAAMNPVHGCHQVVVVE DADRITERGADALLKAIEEPAPKTVWLLCAPTPEDVIVTIRSRCRRLHLATPRDEAVADL LTRRDGIAPEVAAEAARAGQGHIGRARRLAWDEEARARRNAIGELPTRLRSLGDCLQAAE DLVNQASEEAAAATAEVNAAERAELKKALGFGSSGARPRNAQAALRDLEKQQSARLKRLQ RDALDRVLTELTAYHRDVLAIQTGAVRPEEENALRGARLVNAGWSASLHRIADSQSPEHT VATIDAILAARKSLEHGVTPLLVMETLLIAMTGVDRARW >gi|302034478|gb|GL383157.1| GENE 351 383402 - 384208 688 268 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3291 NR:ns ## KEGG: HMPREF0675_3291 # Name: not_defined # Def: DoxX protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 268 1 268 268 447 100.0 1e-124 MSKAIKRTAADSTDAETTRVIRTGASRVDADVNPTEVIKPSDSADSERTSVIDDNVFRPA SETTRVVDDREFEEERRRRELAEQRARERADRQAIEAERQRRAAHAEPEPEQVAEPAPKR TTDKVMASLGLFLFRLIVGGILGVHGFQHLAQRDLTLRAVQALPLPSGYAQSGVWVLGIC ECIAAVCIILGLFTRVAGAGIIAIMVLSLTFIFWGSFAIFKTMGFKGELELLLAACGVLL LFLGAGGWSIDAAYRRSRAAAKAEEVGD >gi|302034478|gb|GL383157.1| GENE 352 384493 - 384945 159 150 aa, chain + ## HITS:1 COG:SA0443 KEGG:ns NR:ns ## COG: SA0443 COG1774 # Protein_GI_number: 15926162 # Func_class: S Function unknown # Function: Uncharacterized homolog of PSP1 # Organism: Staphylococcus aureus N315 # 13 125 54 166 211 113 44.0 1e-25 MEVLAIDLVESGDDRAIAVYFRAPHRVEFATIVGPLARRLRARIDLRQLRGRDTARVVGG VGVCGRSLCCSTFLPEPSSVPNRLVSEQGMASNPLAVTGACGKLMCCLRYESPYYADFEA ALGEVRVPDAPRCPLMSTCSRRRDQERKDA >gi|302034478|gb|GL383157.1| GENE 353 384962 - 386644 803 560 aa, chain + ## HITS:1 COG:MT2281 KEGG:ns NR:ns ## COG: MT2281 COG0596 # Protein_GI_number: 15841715 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Mycobacterium tuberculosis CDC1551 # 120 560 54 518 520 201 34.0 5e-51 MTPRVSRRRMFVSALMASSLFAVTACTSAGSRPPQSASVSRQSASHKPSASPSVTASVVP AQDKVDTNPPVASFDPKAHALMEGPQSPDRQAMHPARDNKPFSKAPAGKGTNRYLSRKIS WHDCGTFQCADIPVPLDWDNPDGPAVTLALKRKPAEGAAKATLFINPGGPGGSGQDMVSS FQSSAFPDHDVIGWDPRGTGASTHVNCGPAKTMDGLFSLDASPDDEAEWNELIRGTRDFA RSCRAYSGQLLDHVSTIDTARDLDYLRYLVGNKKLDYLGVSYGTFLGATYAELYPGRVGH MVLDSTVNITNHDTVSQAVGFDRAFGDFAQWCANRGNRCALGTSEAEVRKATLNFLDRLD AHPMKVAGRELTQSLAATGIALFLYSGKQAYSYLIAALVGAMKDGNGGYLLTASDYLNGR GKDGQWETIASAFPAISCLDQADFGLKHARQEWPQEVAKAPTLGKALGVAPICEVWTARP APQLYLTARGAAPILVLGATGDPATPYEQATWMAGQLKSGVLLTWRGSGHSAWELGNQCV KKAVEGYVNDGKMPKDNTVC >gi|302034478|gb|GL383157.1| GENE 354 386733 - 387065 260 110 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3294 NR:ns ## KEGG: HMPREF0675_3294 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 110 1 110 110 187 99.0 9e-47 MTLGQRHVTGIVVRAVGLALLAGILLALEWAWRTHAWNDLKAVDGRCVLVGARVDDGRVP TVGCHENGARYVKDVVKPSSQCPEGLTRVSVRHELSHDAGYVGALCVRNP >gi|302034478|gb|GL383157.1| GENE 355 387099 - 388748 1477 549 aa, chain - ## HITS:1 COG:Cgl0137 KEGG:ns NR:ns ## COG: Cgl0137 COG4805 # Protein_GI_number: 19551387 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 7 549 19 553 553 371 42.0 1e-102 MGSEVDEVADHYWAALVQSSPTLATALGLDLNQDEYDDLSPAGLDAQYRLAMDTLDRLDQ AMPADDTDRITAAAMRSSLGLEAESHDRGYDLLSLNGIASGVHEIREVYDAMPTETPDQV STVARRLHATGPALDGWLATQRASIDAGIPPAIRQVSLLVEQITAWTSDGGFFDDYLKRT ASRDLPDAVTTALAEGIDAAKRNFRRTAEALSSEIAPLATETDAVGIDRYRLASRQFVGT TVDLTETYEWGKQELARIEQMQRETAERIRPGASIKEAMAVLDADPAYQITGTAALKVWI QERADEAISSLDGTHFEVPEQARHIEGMIASTHDGGVYYTPPSDDSSRPGRMWWSVPDGV NTFTTWRELTTVYHEGAPGHHLQTSSAIAAREELNSWRRNYWTSGYGEGWALYAEWLMAD LGYMDDPGHFMGLLDGQSMRAARVVLDIGLHCQFEAPEEMGGGEWNWDKAWAFFNNHVSM DEGSARYEVNRYFGWPGQAPSYKLGERTWLELREAAKAKDPNFDLKEFHTTALRMGALPL DVLRRAMLS >gi|302034478|gb|GL383157.1| GENE 356 389186 - 390535 984 449 aa, chain + ## HITS:1 COG:slr0782 KEGG:ns NR:ns ## COG: slr0782 COG1231 # Protein_GI_number: 16331344 # Func_class: E Amino acid transport and metabolism # Function: Monoamine oxidase # Organism: Synechocystis # 3 449 24 471 471 205 30.0 1e-52 MYDSIIIGAGLAGLTAAEELASAGHSVVVLEARARVGGRLENAELSNGQVVELGGQWVGE GHEELRSLLSSQGLELVDSTDGDVVVKARGRVSHVTSLSEPSAHSLSPFELADLGQGLLR FRRLADRVANNKGWAAANATWLNQSLSQWTASNVRTEAGRGYITNLFRQAFGVSANDTPL FNGLAKANAGVDLESLVAVNGGLKQQRVKGGVAQVTRNLAEPLGDDLKLSSPVRSVHSDD DGVTVTTTDGTQYQGRSVIVTVPPRLLKDMTFEPALPAERLEMADKVPAGNVIKAYLVYD SPWWRTSGASGQMGADEGAVRVIFDTSDDETGKGILMGFFEGAEASGYGKLSIGLRQRAF EEVVESAFGKAPSSPIEYLDRDWLAEPYTGGCHGAHFAPSLWTTTGPILAEPLGRVLFAG AEYASSFNGYMEGALRAAARAAQEVLDLL >gi|302034478|gb|GL383157.1| GENE 357 390837 - 391880 386 347 aa, chain + ## HITS:1 COG:no KEGG:PPA0251 NR:ns ## KEGG: PPA0251 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 347 1 342 342 446 94.0 1e-124 MFCARCGTQVGAHDAVCPQCGLNLRLPGAVRMTDPGSCDETRVQSPVSEGATPTREIPRV QTPSEPVEWQDSMPTQQWQVQDSTPTQQWTTNSQSGPQQPSQGQYRDLGASQMPDDWFRD PEAERTRVMAAVPENPVFTPPPPPSTPAMAYPPPPSGDSSRHRKVLIGLVVGLLVLVVLG AVLLFAGGLKGRSGSEPAVVATPSASSQPKQSASEDPQATSIDTTPSFLMSSPASPSPVP SSPASSSPALSTPTPLSPQSPTLSARQVADKLPDGDTLCSSSVGAVGTTSCPFALEVANA IPAGAQGDYEVQAYSPVTGKTYTMKCETQESYTTCTGGIAAKVHILR >gi|302034478|gb|GL383157.1| GENE 358 391898 - 392383 364 161 aa, chain - ## HITS:1 COG:MT1313 KEGG:ns NR:ns ## COG: MT1313 COG2062 # Protein_GI_number: 15840723 # Func_class: T Signal transduction mechanisms # Function: Phosphohistidine phosphatase SixA # Organism: Mycobacterium tuberculosis CDC1551 # 4 145 8 155 168 74 34.0 6e-14 MHTLFLMRHAQPASHAPGGDRERPLTDVGRRQAREVGTRLGLRNVGHALVSDALRTRQTW DCLQLDCPVEFMRALYYCGTDTVRQRIGEIDDDVDNLLIIAHAPTIPGLAAQLAAMSGAE NEVGCWYPPATLTEVEVDGTWADLKDEYFDKVRLVGVQRPM >gi|302034478|gb|GL383157.1| GENE 359 392431 - 393420 516 329 aa, chain + ## HITS:1 COG:TM0077 KEGG:ns NR:ns ## COG: TM0077 COG3458 # Protein_GI_number: 15642852 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acetyl esterase (deacetylase) # Organism: Thermotoga maritima # 1 328 1 322 325 238 39.0 1e-62 MPLTDLGIDEARTYRPNVPEPDGFDSFWAETLDEYSGVPQDLTAVPFDNRQALIDTWDLS WAGYHNSRVSGWLHAPAAVNGPLPLVIEYLGYSSSRGVPIGSVFAAAGYAHIVVDPRGQG WGHPTLTENCPDVHDGSGAPGFMTQSLSDPHGHYYRRLFTDAFRCLQAAREMELVDPTRI AVLGHSQGGGQAIAVCALAAMRGIKLAGAFVDVPFLCHIRRSCDIATDGPYLEVVRYLAA HPSLCGRAFQTLGYFDGLHFARRARTSTWFSVAMMDQAVPPSSVWAAYNAWGDGMVADKH IAVYPFAGHAAGEDVQRWNQLGVLAQLFS >gi|302034478|gb|GL383157.1| GENE 360 393436 - 394449 671 337 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3302 NR:ns ## KEGG: HMPREF0675_3302 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 337 1 337 337 635 100.0 0 MSESLVLLAPAANHVYAGQAGRLCAAELSLTCPNATSVAPVTVAGVEYLSIHSEDPLPPA DLAAVARSSAALACFEYRGDLLAPLELPQVDVVDEDLVTIPKYRGKTNEQFTRLLLNLTL ASLEGRCATRRDEGQRLAILDPLAGRGTTLECAWRAGHNGFGVEQDAKAVEALAAHVTTW LRRKHLKHSCGTHPVRRDGRSLGKRFDAEVRLPKTEPLAMGVFTGDAADSAVLWGRKTFD AVVTDAPYGVVHGSHSGASRRRSPTDLLREAIPVWAGQLRHGGALGMSWNTLGLSREHLV TILSAAGLTPLDDDLWHQFSHRVDSSIHRDLIVAVKP >gi|302034478|gb|GL383157.1| GENE 361 394560 - 395114 511 184 aa, chain - ## HITS:1 COG:MT3730 KEGG:ns NR:ns ## COG: MT3730 COG0221 # Protein_GI_number: 15843240 # Func_class: C Energy production and conversion # Function: Inorganic pyrophosphatase # Organism: Mycobacterium tuberculosis CDC1551 # 17 178 1 162 162 205 62.0 4e-53 MTDDFTNPFQGEQPESLHFDVTIEIPRGNKNKYEMDHETGRIRLDRTLFTSTQYPYDYGY IEGTLGEDGDPLDALVLLTEPTFPGCLIECRALAMFQMQDEMGGDDKVLCVPADDPRRAG LIDLDDVGSMTLMEIEHFFTVYKDLEPGKSVEGATWTDRDEAEAEIKASFERAKGTSYEN LHTA >gi|302034478|gb|GL383157.1| GENE 362 395241 - 396614 902 457 aa, chain + ## HITS:1 COG:ML0211 KEGG:ns NR:ns ## COG: ML0211 COG2027 # Protein_GI_number: 15827014 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) # Organism: Mycobacterium leprae # 7 455 11 459 461 151 34.0 2e-36 MPGWVPVTVGIAVVVIVVVAVIVSSLRSGSPARWTGGGILPHRHDNTAQAVQPGRGVVAA VAPTTPSAKPVAATIANRVKSAGAAPGVLGADIMDAAIGETLYQSGQNSLLTPASNLKVL TAIALLDCTDAGHRYTTKVVANGSALTLVGGGDPYLRSKSSAQHPEYPSMEELAKRTAAA LKKAGTTKVTVNFDDTLFTGPDWNGAWPVDNYSDEVTPITSLWVDEGMINNSPWNRSKTP AVLATNAFIGSLRSAGITVNGSVSRHKADRSAREIAAVQSVPVEDLVTRTLDESDNSAAE VLSRQMALASGKPGSFAGGTQALEEHLKNIGAWQDGAVIQDGSGLSQGNRITASMLSRAW RKVLTTPKLQPVANAVPVGRVSGTLHKRFSDPSTAAGRGVVHAKTGSLQGVISMSGWLRD ADGRILVASFIINQTDGSARSWLDVVYGNLAGCGCTR >gi|302034478|gb|GL383157.1| GENE 363 396614 - 397549 667 311 aa, chain + ## HITS:1 COG:ML0213 KEGG:ns NR:ns ## COG: ML0213 COG0037 # Protein_GI_number: 15827015 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control # Organism: Mycobacterium leprae # 25 268 26 267 323 134 42.0 2e-31 MARRELGPAALAVAQAVERMVRGVDRFVVGCSGGPDSLALALASKWASRRCESGVRVVIV DHQLQQGSDEVAERTRDLLVRRGMDACVRRVDVDADDPDGPEAAARTARRAALLDVAGDE PVLLGHTRDDQAEQVLLSLARGSGATSLAGIRPRSGQFWHPLLEVRRAQTVQACREWEVE PWQDPHNGDPRFLRSRVRTELMPVMEEVLGPEVAASLARSATLLAGEDEVVARVARMWAD EHGVKANELPGLRGVEVGLARRVVKEWLPQARMVHVDAVLGLLDGPGGAGVDVPGGRVEM RQGTLYLARRL >gi|302034478|gb|GL383157.1| GENE 364 397577 - 398131 577 184 aa, chain + ## HITS:1 COG:CAC3203 KEGG:ns NR:ns ## COG: CAC3203 COG0634 # Protein_GI_number: 15896450 # Func_class: F Nucleotide transport and metabolism # Function: Hypoxanthine-guanine phosphoribosyltransferase # Organism: Clostridium acetobutylicum # 9 183 4 178 178 176 45.0 3e-44 MRASDIPGDFDHVLYTEEQVASRIREVAAQIDADYAGREILMVGVLNGAVMTMADLCRAM TSHMSMDWMAVSSYGAGTKSSGVVRILKDLTKDIDGRDILIVEDIIDTGLTLSYLVQNLR SRNPNSIEIMAMFRKPEVVTCPLDVKYVGFDIPNEFVVGYGLDYADKYRNLTDVATLAPH VYKS >gi|302034478|gb|GL383157.1| GENE 365 398273 - 400426 1295 717 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 [Rickettsia canadensis str. McKiel] # 12 605 9 593 636 503 48 1e-141 MKNASRIFKGPLIWILLCIGLIIVFLQFAGSGNGYKDIPTSEAVSIINSSKKLDSVTLTD GDQVIKITENENKKYRSYWVGNQSDQLVDRLNDRVKAKTLKSWQGENPGQSIWKALLINF LPFVIILLFFLWAMNAAQGMGGRGGVMGFGKSKAKVGSKDTPKSTFADVAGCQEAIDELQ EIREFLAEPAKFQRVGAKIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMF VGVGASRVRDLFEQAKEAAPAIIFIDEIDAVGRHRGAGMGGGHDEREQTLNQLLVEMDGF DVHGGVILIAATNRPDVLDPALLRPGRFDRQIAVEAPDLDGRLKILKVHAHGKPMADDVD LASIARRTPGMTGADLANVLNEAALLTARANLPVIGNFELDEAIDRVIAGPQKKTRLMNE HERLVTAYHEGGHALVAAAMPGTDPVQKITILPRGRALGYTMVMPDSDKYSQTRSELLDS MAYMMGGRAAEELIFHDPSTGASNDIEKATKVARALVTQYGLSARVGTVQLGSGDTEPFL GMTAGQQRDYSDETAKIIDDEVRELLENAHQEAFDCLDANREVLDELVRQLFARETLSKA EVADIFKPLKRWPERGAFTGSDKRVPSSIPPVKPPQIAGVDENAPEVGAPRRGVIAPPTP EPGGDLPGDNPGEWEPPSDWQPPSVGGGKSPEPPSPTHPGEGPQPPSNGNPWGPPRS >gi|302034478|gb|GL383157.1| GENE 366 400491 - 401066 474 191 aa, chain + ## HITS:1 COG:ML0223 KEGG:ns NR:ns ## COG: ML0223 COG0302 # Protein_GI_number: 15827020 # Func_class: H Coenzyme transport and metabolism # Function: GTP cyclohydrolase I # Organism: Mycobacterium leprae # 6 187 20 202 205 236 67.0 2e-62 MKLSVDRERAAAAIREFLLAVGEDPDREGLRDTPMRVAQAAEELFGGLSQDPGELLATTF DISHDEMVLVRDIELQSMCEHHLLPFIGVAHVGYIPARDGRVTGLSKIARLVEVYARRPQ VQERLTTQVADALVEHLDARGVIVVVEAEHMCMTTRGVRKPGARTVTSAVRGILRNPATR AEAMGLITAGR >gi|302034478|gb|GL383157.1| GENE 367 401130 - 401432 194 100 aa, chain + ## HITS:1 COG:no KEGG:PPA0262 NR:ns ## KEGG: PPA0262 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 4 100 1 97 97 142 98.0 6e-33 MVTVFSAVGGPAAATVGVMTGLAEGTLILAFVTPRRYRRGDEADLPVRSRWWVPVWTVFG RSPGAGFLVFVVFFALALISGGGGIGMGDVKRAVFIGLMG >gi|302034478|gb|GL383157.1| GENE 368 401674 - 402780 765 368 aa, chain + ## HITS:1 COG:RSc2380 KEGG:ns NR:ns ## COG: RSc2380 COG2885 # Protein_GI_number: 17547099 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein and related peptidoglycan-associated (lipo)proteins # Organism: Ralstonia solanacearum # 253 366 93 205 209 76 39.0 7e-14 MWNWKMRAAGFIGGLAVVFGFVALPAHSDESVTVPVPLVDAVAVSHYESAKRQKEKPGSV ILALHAVRRLPYATVVYYSVSVDASVSGPLEDYGYLVGRGGAQAHYSGTLSADGAVIDVG NHKLYRTIGDFQGCKMCASEWWNGAPIWEMAPGHSRLGWFSTPPLPADVSRVDVTVANRI FHDVPVGDGLLGPTIDKEAATGRWNKGMPLGVALPALDPKDLAGVDVSKFVNALVTTTGD ASDASRERVTKESMKIDLDASVLFDLDSDVVKPAGRQIIDRTAKQLVARKVSGKIEVTGY TDSSGSASHNLDLSRRRAASVAKVLGSQLSKGITLVTAGKGEADPVTSNDSEAGRRLNRR VTITVKEG >gi|302034478|gb|GL383157.1| GENE 369 402780 - 403418 346 212 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3312 NR:ns ## KEGG: HMPREF0675_3312 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 212 1 212 212 341 100.0 1e-92 MKGRPVFVGCVAVLVLTACGGAGVSAGSHPHTAVASSSVSVVGMSAPPSASVSVMGSEQA AAVESAAGKAIRDKVKEDGGPIPKEVANVSFHPNLDDNVDVTAHVVSIKAGPTGTVLTFW LTSNTIDHAMGPVFPEDFPSLVDTVGGVKYGVNYFSKAGDTSKFVVGSEEPEIDAKSVYV MQASYPPLPKSVTKVKIAIGSAKTSPDIPVTR >gi|302034478|gb|GL383157.1| GENE 370 403622 - 404146 340 174 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3313 NR:ns ## KEGG: HMPREF0675_3313 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 16 174 1 159 159 329 99.0 2e-89 MMANNYGVSRRTLLGVGGLMLGVGLVGCSDSEEGWESVTVDRITVSHPTEWVEKPPENEN FTKNFTDGPHGMQIAGHYSDDTEPTLAWSVLEFMIRGTFQGYDPKGYQEITVKGAARAIK CPFDFTYKGKSARGYWLVASGVLPTEGSAIVLLRLPRDDTNLVDKIIASMSFKA >gi|302034478|gb|GL383157.1| GENE 371 404176 - 404628 210 150 aa, chain + ## HITS:1 COG:no KEGG:PPA0267 NR:ns ## KEGG: PPA0267 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 150 1 150 150 233 98.0 2e-60 MRQDTRSAWADPTLTSPAPKRRSRTFNVVLGVLLTIVAAGIADVVVVWSCALVYDTRLGA ALLGCLGALVLSHVWASRRALATVWWSCGLVLLCVVGMAVYAWVRAGLSPVDPVVVETLA PILPVAACTAVGTGYVWRLCARLVADHRSL >gi|302034478|gb|GL383157.1| GENE 372 404818 - 405792 595 324 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3315 NR:ns ## KEGG: HMPREF0675_3315 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 324 1 324 324 545 100.0 1e-153 MRTRDDRGAAAPEYIAILLIAAMFTSAVAVGVKPEWVQQKVCQALAVIFGKGSCAPASQA KPPAQQLPKRCLIHSDENATSIYAEGKITWVTIGGEGGYGYHLVEYSDGKADVELFYNVG ASAGAAAPGWSKGPASLDASITGSAKYTKGETVHYDSVAAARADRDSLNKYARERALAVM HLGSAPDVPNSRLSSTSRTVEVDVKGKATLKVKAKVGGHGSADAGASGSVNGIVQYITKR DSKTGAVTHTVEALGSANGDAHANAGATMGNHGVKTPTVGGHAGLDDDTSVSVTKDNSGK ITELVITKSGAEGADFGVDGDFKI >gi|302034478|gb|GL383157.1| GENE 373 405773 - 406405 470 210 aa, chain + ## HITS:1 COG:no KEGG:PPA0270 NR:ns ## KEGG: PPA0270 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 210 16 225 225 361 100.0 1e-98 MVTSKFELGKPRLVPGPGKPRLVSGPGKPRLVSGPGKPRPVPGPVRWKPEPNKTRDAGNN EGRHGKQGKGSTLSKKPGREEESDGDHKSRETTTIRVAVNDQNRSQVEKWLGDNDVGPSN AVPLLVKARFMNPLDADATNDFAKFLYQSEDTQIDTQTSSETSDLKDDSYDILVAKVGEK DARESSSSTGQMGYLLENGKRVPKISEGCK >gi|302034478|gb|GL383157.1| GENE 374 406461 - 407306 869 281 aa, chain + ## HITS:1 COG:ML0224 KEGG:ns NR:ns ## COG: ML0224 COG0294 # Protein_GI_number: 15827021 # Func_class: H Coenzyme transport and metabolism # Function: Dihydropteroate synthase and related enzymes # Organism: Mycobacterium leprae # 17 280 8 271 284 234 51.0 1e-61 MINVGSATNSHPARTLVMGVVNVTPNSFSDGGMWADPEVAIRHARDLVVEGADIIDVGGE STRPGTERTPEHEELRRVLPVVKALVADGVAVSVDTMRASVAKAVVEAGATIVNDVSGGK AEPEILDVVADAGVDYVLMHWRGQSATMQNLVDYDDVVADVISETSQQVDAAIAAGIDRR RIIVDPGIGFSKTSEHNWQLMNAVDAFQEGFADLRVLWGVSRKRFLGELLAQNGEDRPAL ERDASTMALSTYFALHHAWCVRTHEVRANRDAVETVARLLA >gi|302034478|gb|GL383157.1| GENE 375 407367 - 407729 156 120 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148994682|ref|ZP_01823786.1| 50S ribosomal protein L13 [Streptococcus pneumoniae SP9-BS68] # 5 117 3 117 278 64 33 1e-30 MTYGQITLTGIRAHANHGVLASERELGQPFSVDVSLDVDMDTVSDDLTQAVNYATVAQRV LNILTREPVSLIETLAGKIADTVLAISPRVHSVQVTVHKPHAPVGVALDDVAVTYRKDAE >gi|302034478|gb|GL383157.1| GENE 376 407726 - 408283 431 185 aa, chain + ## HITS:1 COG:SA0474 KEGG:ns NR:ns ## COG: SA0474 COG0801 # Protein_GI_number: 15926193 # Func_class: H Coenzyme transport and metabolism # Function: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase # Organism: Staphylococcus aureus N315 # 1 161 2 157 158 100 37.0 1e-21 MKTVFSLGSNMGDPFAHLRDAVRLIAETPGIHDVVVSPVYVTAPIGGVEQDDFLNLIVVA TSDLPPSVLLERAHVIEAAHGRDHTIPNGPRTLDVDLIRVGDETVTTDELTLPHPRAHKR AFVLVPWRDADPEAELPGYGRIADLVASFDADELADAVKPYSRQIDVAGVTVAGEWDERH DEEDV >gi|302034478|gb|GL383157.1| GENE 377 408280 - 408816 424 178 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3320 NR:ns ## KEGG: HMPREF0675_3320 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 178 1 178 178 336 100.0 2e-91 MTRSLPPEWDDDRRPGGGNPQGNIAPTDWKVIIVAALCGAALGWFALSIYKINDVTVPIL PWSLPVVILVAAIATWGYARAFRTKVVDPQREVEANQGLVSLALGKAIALSGAALVGACI VYVLTFVWHLNIPYPRQRAIVGGVTAITCAAMAWAGWFLENACKVPKGPDDSEKHPKG >gi|302034478|gb|GL383157.1| GENE 378 408899 - 409576 639 225 aa, chain + ## HITS:1 COG:no KEGG:PPA0275 NR:ns ## KEGG: PPA0275 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 225 1 225 225 389 100.0 1e-107 MMMPVSGEHDPKRVEKDTGERRGVLALLIVATIVAAVCGVVPSIWAVRAGVLVALVGAWI SVFMAWRQVDAIRRMHFDTLKELRHAASEQEKRHHAESMEMIDTFSRRVGSISKTLADTR AKLDRAESELSTLRGDKAALQYKVTAGNKKVASLEMRITELETELDALLADGRSGRLTTL RTVTDAGVPTAEEIWERGNDATIADLSRVAFPRLSEGTRETRRQA >gi|302034478|gb|GL383157.1| GENE 379 409653 - 410813 460 386 aa, chain - ## HITS:1 COG:SMa1529 KEGG:ns NR:ns ## COG: SMa1529 COG0649 # Protein_GI_number: 16263284 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase 49 kD subunit 7 # Organism: Sinorhizobium meliloti # 33 386 22 404 404 162 31.0 1e-39 MRKIMFVIGSMPLTHPSQSADGDPGKKYEVTRLDLGHLHPTRSGLVTIATTVDDDVIISS QVNVGTLHRGDEKLFEVRDYRQIPMLASRHDWTAPFIGETGAAHAIEDAMGITIPTRVAW IRTLLAEFSRITSHFTFLSWVGHHCDDAGLENAIATAIENARRIWQRCSGNRIHPMITRI GGLRIHPESEWQPALGEWLDDANALVTQLRTALDATVGVRGVAVIPTNMIDRYGLSGPVS RASGVDLDTRRRTAVYDELKWPEVVIEPRGDAYSRLATLCNDAAVSSSLCRQILDRLPSL DGPLETRLPTAIKAPRGRTWTTIEAPWGRAGYLLESRGSTTPWRMALRTPTFANVQVLEA VLPGTRVDDVEATIASLGWTLGDLDK >gi|302034478|gb|GL383157.1| GENE 380 410982 - 411299 298 105 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3323 NR:ns ## KEGG: HMPREF0675_3323 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 105 1 105 105 127 100.0 2e-28 MAQRVRVDLVDDVDGSPAEESVNFALDGVNYVIDLSAENASKLRDALSLWVDHARRTGGR RTRGRRPTGGPTANEVRQWAKSQGYEVSERGRVSNEIREAYQRTH >gi|302034478|gb|GL383157.1| GENE 381 411293 - 411481 73 62 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|314977069|gb|EFT21164.1| ## NR: gi|314977069|gb|EFT21164.1| conserved domain protein [Propionibacterium acnes HL045PA1] conserved domain protein [Propionibacterium acnes HL043PA1] conserved domain protein [Propionibacterium acnes HL092PA1] # 1 62 1 62 62 112 100.0 9e-24 MQPTDGTGPSACVLSLITAADRSAKPVYAAGTTQVEQRDAGAIPLRRRNRLALSDGHINW NQ >gi|302034478|gb|GL383157.1| GENE 382 411561 - 414095 2464 844 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 1 803 2 801 815 953 58 0.0 MFERFTDRARRVVVLAQDEAKALNHNYIGTEHLLLGLISEGEGVAAKALESLDISLEAVR AQVEEIIGHGTSTPTGHIPFTPRAKKVLELSLREALQMNHSYIGTEHILLGLIREGEGVA AQVLIRLGADLNTVRNSVLQLLQGYQGDERQAATSGAPEAGPQQSSATILDQFGRNLTEA ARDGELDPVIGREREIERVMVVLSRRTKNNPVLIGEPGVGKSACVEGLAQAIVRGDVPET LRDKKIYSLDLGSMVAGSRYRGDFEERMKKVLKEIKNRGDIILFIDEIHTLVGAGAAEGA IDAASMLKPMLARGELQTIGATTLDEYRKYIEKDAALERRFQPIQVDEPSIPLAIEILKG LRDRYEAHHKITITDEAITSAANLASRYIQDRFLPDKAIDLIDEAGARMNIRRMTAPPDL REFDERIARVRVEKEAAIDAQDFERAAGLRDDEKKLLAEREAKEEEWKQGDESVPAVVGP DEIAEVLSGATGIPVFKLTEEESQRLLHMEDEIGKRYVGQEDAVKALCRSIRRTRAGLKD PKRPAGSFIFAGPSGVGKTELTKALTEFLFGDEDALITLDMSEYSEKHTASRMFGSPPGF VGYEEGGQLTEKVRRKPFSVILFDEIEKAHPDIFNSLLQILDEGRLTDAQGRVVDFKNTV IVLTTNLGTRDISKSVNLGFSKADDVESSYEKMKAKVTEELKGHFRPEFLNRLDEIIVFH QLTQPDILRIVDLMVGQLEDRLADKDMGIEVTPAAKELLSTRGFDPLLGARPLRRTIQRD IEDVLAEKILFGEVKPGQIVVVDAAPEGSEEPFVFTGTERSELPDEVPPELTSSAGENNR GQQG >gi|302034478|gb|GL383157.1| GENE 383 414148 - 415155 531 335 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3325 NR:ns ## KEGG: HMPREF0675_3325 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 335 1 335 335 661 99.0 0 MTLDDDAPIWAKTIIDGLNRPFPWGSAHQSSGPDDVDVTPWRLHPAFHGCLDWHSSVHMQ WSAVTLLRCANQVIDHTTIDALNGVLNDRLTDENARVEAEYLRIHRGYERPYGWGWATLL AAQCAPLTGTTWASATRIISLQVFENLLAWLPTLTFPVRTGTHDNTAFGIGLCLDAARSL QRPEVIEAIVEHSHRLFDADVDYPSSWEPSGNDFLSAALSEAHLMARVYDVEGRTNEFGT WLHTFLPRLGQSDDNLLNVPRVTDGTDGKLAHLYGLSLSRAWQLRALATWLAEGSHHRIE KATARQINEVSHQITHGDFMATHWLVSFALQAVLV >gi|302034478|gb|GL383157.1| GENE 384 415152 - 416138 891 328 aa, chain - ## HITS:1 COG:CC1199 KEGG:ns NR:ns ## COG: CC1199 COG3817 # Protein_GI_number: 16125450 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Caulobacter vibrioides # 1 323 1 316 318 234 45.0 1e-61 MIKVEWFYWLCGFLFLVTAVVRLRDREDNKRFGSAAFWAILAFSFGYGSFVINKTAPTLV EGIAVLLLVVLAACRFPGRGSTETTTEAEREKSAKKFGNKLFMLALIIPFVAAIFAVAGM RNVSFDGSPLLETGMATIIGLGAASVIALVTAMIMFKVRSPVVAFKEGDRLLGHIGWAAI LPQFLATLGTLFNNAGVGDAVGRITSWILPSESLFAAVCVYCLGMALFTLIMGNAFAAFP VMTAAVGWPLLIQHFHGNMAAVFAMGMLAGFCGTLCTPMAANFNLVPAALLELDDSYGPI KAQIPTAVPLLVCTILIMYLCCFPGGLL >gi|302034478|gb|GL383157.1| GENE 385 416135 - 416899 764 254 aa, chain - ## HITS:1 COG:YPO2701 KEGG:ns NR:ns ## COG: YPO2701 COG3819 # Protein_GI_number: 16122905 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Yersinia pestis # 1 218 7 225 243 197 49.0 2e-50 MWVLLAVAIVVIGFALRLNAMLVVAVAGIAAGLIAGMSPVKLIETFGTGFASSRSVTVFI VVLPVIGLLERHGLMQQAGRLMSKMKSMTAGKLLAVYLAVRQITAAVGLSSIGGPAQAVR PLVVPMAEAAARRTHPRYTRKMREKLRSYASSADTIGLFFGEDVFIAIGSILLITGFVDA TYNLKLEALQIALWAIPTAICAFLIHAPRLWLLDRKLAKMAAEGGDNVDTDEVPEPGHTV SLPSGGNPEQGVHE >gi|302034478|gb|GL383157.1| GENE 386 417022 - 417792 728 256 aa, chain + ## HITS:1 COG:ML0333 KEGG:ns NR:ns ## COG: ML0333 COG1540 # Protein_GI_number: 15827090 # Func_class: R General function prediction only # Function: Uncharacterized proteins, homologs of lactam utilization protein B # Organism: Mycobacterium leprae # 1 254 1 250 252 275 57.0 7e-74 MATVDLNADMGESFGSWKTGDDESLLGIVTSANVACGFHAGDAVVMGQTCKAAAEHGVCI GAHVSYRDLAGFGRNFIDVDPGRLRDEVIYQLSALRGIAAVHGASVRYVKPHGALYNTIV HHQAQAKAVVEAIDAVNSATGADMAILGLPGALVLDLAEQQGVRTLSEAFADRAYNPDGT LVSRRQEGSVLHDPGEVAERVVTLVTQGSVTAIDGTKVPIKVDSVCVHGDTPGAVAMATA VRDRLASTGIELRAAA >gi|302034478|gb|GL383157.1| GENE 387 417789 - 418409 290 206 aa, chain + ## HITS:1 COG:AGl1866_1 KEGG:ns NR:ns ## COG: AGl1866_1 COG2049 # Protein_GI_number: 15891050 # Func_class: E Amino acid transport and metabolism # Function: Allophanate hydrolase subunit 1 # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 205 26 228 253 168 46.0 5e-42 MRLLPAGRTAVLVELDDAGQRRRLHRTLSEHPAVGTVDLVPAQTTVLIDVESPDQLPAAV AHVQEFIAAGLDCVEQGAREIVEVPVRYDGLDLSDVAELLSMTTDELVKRHSDQQWTVEF AGFMPGFGYMSGADWPYRIPRRDSPRTRIPPGSIALADGFTGVYPQASPGGWQIIGTTDA ILWDETADPPALLLPGAVIRFEVVDS >gi|302034478|gb|GL383157.1| GENE 388 418406 - 419275 273 289 aa, chain + ## HITS:1 COG:ML2550 KEGG:ns NR:ns ## COG: ML2550 COG1984 # Protein_GI_number: 15828371 # Func_class: E Amino acid transport and metabolism # Function: Allophanate hydrolase subunit 2 # Organism: Mycobacterium leprae # 9 282 13 286 305 179 42.0 7e-45 MTHFVVETAGPRTLIEDAGRRGWADLGISGCGAWDRRAYLDGARLVGNGAGLGCLEILLG PVRLRCVGGPVLVAVTGADAQIDLDGAPRPSGWGFLVTDGQTVSIAMPATGLRSYFSVTG GINASPTFASVSADPTRGMGPAPLKAGDRVSVGDGPAGLISTTPVDIQQAPTELVLHGVW GPRDDWFTDAGRRSLEQTPWRVAQASDRVGTRLEGPSLERAVTGELTSEPVMRGAIQVPT SGVPLVFGPDHPTTGGYPVIGVVDPEDADRLAQARAGVVVRFAMTAHDW >gi|302034478|gb|GL383157.1| GENE 389 419439 - 420926 1139 495 aa, chain + ## HITS:1 COG:MT1289 KEGG:ns NR:ns ## COG: MT1289 COG0477 # Protein_GI_number: 15840696 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Mycobacterium tuberculosis CDC1551 # 29 455 18 429 579 360 48.0 3e-99 MSPEQSSVAHVEHLARDRDGHVVTEEQAWSALWALLIGFFMILVDTSIVTTALPATIRAL NANLNQGVWITSAYLLTYAVPLLITGRMGDRWGPHRMYIIGMLVFGVSSLACGLSPTIGV LIAARAVQGIGAALMTPQSLSMITRLFPPEKRGAAMGLWGATAGVASFVGPVLGGILVDT LGWEWIFFVNVPVTVIGLWLAIRNVPALETHGHAFDWCGVVLSGIGMTLLVFGIQEGEQY NWGTITDIISVPLLIVLGVVFMVLFVVSQTQWAQSRLHARSTNFEPLVPLRLFTKRNFTL ANIAIFLVGMLVTSYFLPTAIYLQNVRGKSPTVAALLLIPTAVVSGVLSPVVGRVLQHRR SGRMAAIGVSLYVISSIGWWLFTVPSTGLWVFPLLSVITGVGAALTWSPISLVGTDDLGQ ADAGAGSGVYNATRQVGSALGSAFIAMMMDARIMARHDLGRGLGESMFITITAGTICVIV CAFFANFQRSRQRNS >gi|302034478|gb|GL383157.1| GENE 390 420994 - 421893 576 299 aa, chain + ## HITS:1 COG:MT2273 KEGG:ns NR:ns ## COG: MT2273 COG1090 # Protein_GI_number: 15841707 # Func_class: R General function prediction only # Function: Predicted nucleoside-diphosphate sugar epimerase # Organism: Mycobacterium tuberculosis CDC1551 # 3 294 7 297 302 223 44.0 3e-58 MRIAIGGFAGLIGTALVQRLRKEGHDVVTLTRHKPIQPSDRRWDLDTLSIAPPFLDDVDA VVNLAGAPIADGRWTDERKTRILASRIDSTRVVVRALASSPRCRIFLNGSAVGYYGPHGD EWLDENDPAGAGFLAEVCQRWETAANSAPDGVRVATLRTGHVVSSFGGMLGKERPFFQFG LGGKIRDGSQYMSWISLHDHVSAMMKVLTDDAMSGPVNLVSPNPCTNAEFTTALAQAMHR PSVIPFPVPAAKMIFGSQLVDEALCSGQRVKPAKLLEHEFEFRDTSITESITSALAGRR >gi|302034478|gb|GL383157.1| GENE 391 421890 - 422798 524 302 aa, chain + ## HITS:1 COG:MT0119 KEGG:ns NR:ns ## COG: MT0119 COG0705 # Protein_GI_number: 15839491 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein (homolog of Drosophila rhomboid) # Organism: Mycobacterium tuberculosis CDC1551 # 75 270 59 244 284 104 36.0 2e-22 MSQNNQRPDGFSRPDEWGSWQDEPQQNHGDASGAASHARPAQRDESTASQPEPYRSVDVD PSWAPPSASYQQATPRPVARVKRHSDVPVVTWTLIGICFLVWVGEWLSPQVGEAVVLAPR VGFTEPWRFVTSMFGHALSIFHIGFNMYALWALGRSLEPFLGRARFLAAYLMSGLGGGAL FCLMATADGGRAILPNVDDGVVGASGAIFGLFGVLLIVQRRLGASTRELWVVLAINAALL LFISGIAWQAHLGGFLVGMMCGVIFFEDPKRIQAGKSAQTWPRMALLLFAMVAALVVKYL VI >gi|302034478|gb|GL383157.1| GENE 392 422816 - 423370 197 184 aa, chain - ## HITS:1 COG:Cgl1057 KEGG:ns NR:ns ## COG: Cgl1057 COG0563 # Protein_GI_number: 19552307 # Func_class: F Nucleotide transport and metabolism # Function: Adenylate kinase and related kinases # Organism: Corynebacterium glutamicum # 39 171 4 144 177 99 43.0 5e-21 MLSLAQGDETGEVLIDANRFDLLEELILAEPLRHGQPVVLIDGRSGAGKTTLANTLICHH ADWQLVHADDLYPGWSGLSAVWDLRDLVARRRYRRWDWYQNRFDDEVILNANRPLVIEGC GVLTPTNAPLASLRVWCEVSAPLRRHRALARDPEFRDQWAMWAVQEGLHIARHRPADLAD LTIS >gi|302034478|gb|GL383157.1| GENE 393 423444 - 424100 572 218 aa, chain - ## HITS:1 COG:BH2213 KEGG:ns NR:ns ## COG: BH2213 COG2197 # Protein_GI_number: 15614776 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Bacillus halodurans # 2 214 1 210 217 134 36.0 1e-31 MLPVRVLLVDDDTLVRRAVRQILEAADDLEVVGEASDGDGAVRQAPQADVVLMDLRMPGM SGVEATSRITHSPSSPKVVVLTTVTADAAITDAVHAGASGFLLKASSPDDIVNAVRAVHA GDAFMSPTSTRQLLEQLRGDAGRRVRGAARKTLSALTDREREVAIAVAEGLTNDAIAARL NVSASTVKAHLSTIQTKLDVDSRVRIAVLVERAGYLAA >gi|302034478|gb|GL383157.1| GENE 394 424180 - 425412 794 410 aa, chain - ## HITS:1 COG:BS_yvfT KEGG:ns NR:ns ## COG: BS_yvfT COG4585 # Protein_GI_number: 16080460 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Bacillus subtilis # 162 408 93 322 328 67 28.0 3e-11 MIEYEVVGDDRRPAVWLSIVLIAIGILGCFTSTAFCPLALRMTAQNPSGLTVLHGVAALV ADMVLPVGLLWRHRQPFTITLVTAAISLVLPIGNTVPLIALACLLGRRRGAASWWATAAV TITTTIVGIVDAARSPKAASTIKTLLSPANTPDAADLTVSWFTVAAFIAAGLIISIGSGL WRRTQRATTSLTRERDVAQATNAKLGDELSRREERERIAQEIHDQLGHRLSLLSLQSGAL ETQLRDNPDVVKAAHEVQAGAAAAVNDLHSLLSVLTESRVTPDLPLSKLAEVIDESFGAG QPLNSSVFIEDADRVDPAVSRAVYRIVQELLTNAAKHAPGQTTTLRIRGNPRDGISIDAT NGYIGGWAGGPSAHSRGLKGITERVELLGGSLHYGLDDNLFHVHVDIPWQ >gi|302034478|gb|GL383157.1| GENE 395 425563 - 426159 550 198 aa, chain + ## HITS:1 COG:no KEGG:PPA0291 NR:ns ## KEGG: PPA0291 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 198 1 198 206 331 100.0 8e-90 MSNDQQPPHYPQPQYPGEGPQSQSNPQYALNSGGMPPSKPKKPIYKRVWFWIVIAVVILG IFAALGGGSKGGDEQKSGSDKAASAPATSQAKEADKSAGKPAEKPAAKTTDEDQVKGDLA LLKGWKLKKDEFSAHVTGYVRNNSDESINNYIQIEFNAYDASGSNTDTCLANTNTIDAHG KWKFDAICSQNPSEIKTV >gi|302034478|gb|GL383157.1| GENE 396 426365 - 427276 636 303 aa, chain - ## HITS:1 COG:lin2530 KEGG:ns NR:ns ## COG: lin2530 COG3711 # Protein_GI_number: 16801592 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Listeria innocua # 22 294 1 274 285 130 28.0 3e-30 MQRPDRSRYATTKQGSLRPGHVIVKKIYNNNVLLGVNGSGTEMVVNARGIAYGRHRGEIV DASSAQRYVAEGAYRTTAIASLLTNATHTEVRVAQAIVELAREELGTPHARRMMLPILDH LVAAVHRAKQGAVIDFPLEWEVRQLYPDEAELGRRAVEIVDGALGIHLQPEEWVAFSLHF INQRWDSKDVSRTMSMTQTICDVFTELEDLWHVEIDRSSMSASRFVTHLRYLFARASDNK QLSHVDLDIVGLMSDRYAEATLAASQVAEHMSKVIGNDLTKAEINYIALHTTRLYNEVMG MDG >gi|302034478|gb|GL383157.1| GENE 397 427281 - 427754 207 157 aa, chain - ## HITS:1 COG:BS_ptsG_3 KEGG:ns NR:ns ## COG: BS_ptsG_3 COG2190 # Protein_GI_number: 16078453 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIA components # Organism: Bacillus subtilis # 17 146 11 141 156 137 54.0 7e-33 MSIFRKRRKATPLTIAAPVSGEIIDIADVPDPVFAGKHMGPGFAVAPVSGDFTSPIDGLV MLVAPTLHAVSLRADNGAEVLVHVGVDTVELKGEGFTAHVNEGDRVRTGDPLLSVDLDSI RPRVPSLISPVVVTNAAGFTISERSNDPASVLSVTAG >gi|302034478|gb|GL383157.1| GENE 398 427766 - 429292 1509 508 aa, chain - ## HITS:1 COG:SP1684_1 KEGG:ns NR:ns ## COG: SP1684_1 COG1263 # Protein_GI_number: 15901519 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Streptococcus pneumoniae TIGR4 # 1 405 1 405 422 539 70.0 1e-153 MFKTLQKIGKAFMLPIAILPAAGLLLGIGGALSNPTTVKSYPVLDNPILQDIFQVMSAAG NVIFENLALLLSIGLCIGLAKRDKGTAALAGITGFLVMTATTKALVVLSRHPDRTIDTGV VGSLVIGAVAVWLHNRYHNIELPAFLGFFGGSRFVPIVTAFAGIIIGAFFFVVWPPIQAG MVSAGTAIADWGVIGTFFYGFLMRLAGAVGLHHMIYPMFWYTPLGGTEAVAGKTVVGAQK IFFAQLADPNHVGLFTHSTKYFAGRFATMMFGLPGACLAMWRCVPKGRRAKYTGLFASVA FTSFLTGITEPIEYMFLFVAPLLYVFHSVLDGVSFLVADLINIRIGNTFSGGAIDYLLFG VLQGEAKTHWLYVLPVGALWFVIYYFSFTFFIKKFRIATPGHLEDTMTAATPTDRRSQEK SERRNDGIDETAAEIITALGGAENIEDVDACITRLRVSVKAPDQVSKASLKNLGATEVFE VGGGVQAVYGAKAILYKNAINAQLGIDD >gi|302034478|gb|GL383157.1| GENE 399 429294 - 429587 342 97 aa, chain - ## HITS:1 COG:SP1685 KEGG:ns NR:ns ## COG: SP1685 COG3010 # Protein_GI_number: 15901520 # Func_class: G Carbohydrate transport and metabolism # Function: Putative N-acetylmannosamine-6-phosphate epimerase # Organism: Streptococcus pneumoniae TIGR4 # 3 58 8 63 232 70 57.0 7e-13 MNSVVQSLAKGLIVPCQTLPDEPIYSKSGGVTPLFTTAAAQSGAVDIRANSVRDIKTILS TGADIVAVGGTITRPAQICTQFIDAIRARIPHTSLEN >gi|302034478|gb|GL383157.1| GENE 400 429586 - 429702 79 38 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|332674703|gb|AEE71519.1| ## NR: gi|332674703|gb|AEE71519.1| hypothetical protein PAZ_c03170 [Propionibacterium acnes 266] # 1 38 1 38 38 67 100.0 4e-10 MRTSGNVGYTGLNTLVPAGGSGIAESYKPEIHELLLRR >gi|302034478|gb|GL383157.1| GENE 401 430465 - 431340 457 291 aa, chain - ## HITS:1 COG:Cgl2617 KEGG:ns NR:ns ## COG: Cgl2617 COG1194 # Protein_GI_number: 19553867 # Func_class: L Replication, recombination and repair # Function: A/G-specific DNA glycosylase # Organism: Corynebacterium glutamicum # 13 284 9 283 293 256 48.0 5e-68 MPDTGLTSQVIEAICAWFDANGRDLPWRRPGTSAWGVLVSEVMSQQTPMSRVIGPWHEWM NRWPTPDDLAEEDSGEAVAAWGRLGYPRRALRLHSCAVAIATEHDGVVPNSYDELVALPG IGDYTASAVVSFAFGGRATVLDTNVRRLIARAESGIANCPTSVTRAERVVADALVPDEDV RAAKWAVASMELGALVCTARSPQCEVCPIRDSCRWVIDGKPDNAPARRGQPWKGTDRQCR GVIMDVVRNSPRGVKVQMALSAWPEPDQASRCLESLLDDGLVHRRGSLISL >gi|302034478|gb|GL383157.1| GENE 402 431333 - 432643 1194 436 aa, chain - ## HITS:1 COG:ML2414 KEGG:ns NR:ns ## COG: ML2414 COG0001 # Protein_GI_number: 15828300 # Func_class: H Coenzyme transport and metabolism # Function: Glutamate-1-semialdehyde aminotransferase # Organism: Mycobacterium leprae # 4 424 18 432 446 431 59.0 1e-121 MTSNAELFSAAQAVIPGGVDSPVRAYGSVGGVPRFIEKAQGPWIWDAEGTRYVDLVCTWG PALLGHARPEVVSAVQVAASKGLSFGAPTRTETELADAIIERMAPVEKVRFVSTGTEATM TAVRLARGATGRDVIVKFAGNYHGHSDVLLAAAGSGVATAGLPGSAGVPAASTADTIVVD YNDVAALDAVFSERGDQIAAVIVESCPANMGVVPPEPGFNAAIRRLTTEHGALMITDEVL TGFRCSPSGFWGLQQQAGEDFAPDIFTFGKVVGGGMPLAALGGRAEVMDLLAPTGPVYQA GTLSGNPLATVAGVKTLQLADAGAYQRLDARSEKWRSELVSALDAAGVTYRLQNAGNLFS VFLGVDSPVRNYDNAKSQNAEAYTAFFHAMLDAGVNLPPSCFEAWFLSDAHDDEAFEVFR AALPKAAQAASQVISA >gi|302034478|gb|GL383157.1| GENE 403 432691 - 433737 950 348 aa, chain - ## HITS:1 COG:Cgl0426 KEGG:ns NR:ns ## COG: Cgl0426 COG0113 # Protein_GI_number: 19551676 # Func_class: H Coenzyme transport and metabolism # Function: Delta-aminolevulinic acid dehydratase # Organism: Corynebacterium glutamicum # 26 345 12 337 339 389 62.0 1e-108 MNPYLPDASDPRMAGVKPLPEGLRPVSRPRRLRTTPAMRRMVAETRVAPAQLMLPAFVKE GIDSPVEITSLPGQFQHSTESIKELATQAAEAGIGGIDLFGIPEHKDEIGSQAWDLKGIL NAGISAVREAVGDDLVICADTCLDEFTDHGHCGALTPDGRVDNDSTVPLYAAMAVSQARA GAHMVSPSGMMDGQIAVIRDALDREGFTDVSIMAYSAKYASAFFGPFRDAVNCSLKGDRK TYQQDPPNRREGLRETLLDLAEGADLVMVKPASHYLDVLSDVAEVSQVPVAAYQVSGEYA MLEAAAANGWIDRRRCIGESLTSIVRAGADLVLTYWAIEAAQMFREDL >gi|302034478|gb|GL383157.1| GENE 404 433767 - 434492 489 241 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3346 NR:ns ## KEGG: HMPREF0675_3346 # Name: hemD_1 # Def: uroporphyrinogen-III synthase (EC:4.2.1.75) # Organism: P.acnes_SK137 # Pathway: Porphyrin and chlorophyll metabolism [PATH:pak00860]; Metabolic pathways [PATH:pak01100]; Biosynthesis of secondary metabolites [PATH:pak01110] # 1 241 1 241 241 385 100.0 1e-106 MTTNPADLVKPPVVVPRDDSHDKFVTTLKQAGYGVIHTALTRTVTLPDAERLTAPDLWQA DWLVVTSKTTVGLLPTPLPNPNIKVAAVGAATSAALRTRGIDVDFVPENHSGAGLVAEWP GGVASILLPASQLTADTVPLGLTKVGCTVNRLEIYTTAAVEKLPEVIAQSWPSVGVVVVT ASSVGRALVELVEPLGWRRQKLVALGKPTARTLEVLGHPAHAVASSPTPEAVLEAVESLV A >gi|302034478|gb|GL383157.1| GENE 405 434489 - 435493 485 334 aa, chain - ## HITS:1 COG:Rv0510 KEGG:ns NR:ns ## COG: Rv0510 COG0181 # Protein_GI_number: 15607651 # Func_class: H Coenzyme transport and metabolism # Function: Porphobilinogen deaminase # Organism: Mycobacterium tuberculosis H37Rv # 4 324 2 303 309 209 48.0 6e-54 MSAIRLGTRASTLATTQSEMVAGLLRSEGLDVNLTTITTHGDTSTASLAAMGGIGVFASA IRAALLEGEADIAVHSFKDLPTGRPLGLAIGAVPARADPRDALVARDGLTLHDLPQEASV GTGSPRRAAQLLAVRPDLTIVDIRGNVDTRLGRVKGLGRYAKNGGKEDLDAVVLAASGLA RLGHSGAVTEFLDPSVVLPAPAQGALAVECRTADSRHGKLAKALARIDDRRTRLAATAER AVLSHLEAGCAAPIGALAQLKPVSGKSLQVLTLDVVVAAVDGSRTVREQVSVELPAEVEP ALAAAHTLGVTAAEELLDDGAADVADLKASGSTR >gi|302034478|gb|GL383157.1| GENE 406 435540 - 436970 710 476 aa, chain - ## HITS:1 COG:BH1204 KEGG:ns NR:ns ## COG: BH1204 COG1232 # Protein_GI_number: 15613767 # Func_class: H Coenzyme transport and metabolism # Function: Protoporphyrinogen oxidase # Organism: Bacillus halodurans # 13 394 10 383 467 92 23.0 2e-18 MNISDPQHVDAVVIGGGMAGLVAAWQFTQEGLHPVLVESRGYTGGLIARSTLAGISYDIG AEGWAVRLPDTAELATELGLTVEKPTIAPSWVYFDDACFAMPDNAILGIPANLSDPAVII ALGAEEAARAAELDRAPMPEDLPRDLGTLVASRMGSEVLRRLVTPIAGGIHAADPHLLSV DVVSPGLRAATQATGSLAAGVALCRSRMPAGPAVASVAGGMFIMPAELRRQAEQAGATTM TRVGARGLTRHGDQWLVETAGTSRNPDPSLPPVTDGEIRSFLTPRVVVACSAGPATKLLS NVIDTVGPELAPGAPIGHVNLALQAPALDSSPRGNGMLVAPGTTTVTAKALTHMSAKWPS LRESCPEGLHLLRVSYGRSGEANVALSVDQALTDASVLLGVDLSAEQVVDSQIIHWTGSL APTTPQARAWRDGLHRQLEVLNQSGQGRIGLVGSWASGSGIAALVPQARRTVRQLV >gi|302034478|gb|GL383157.1| GENE 407 436985 - 437902 724 305 aa, chain - ## HITS:1 COG:ML1043 KEGG:ns NR:ns ## COG: ML1043 COG0407 # Protein_GI_number: 15827506 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III decarboxylase # Organism: Mycobacterium leprae # 1 305 48 357 357 258 47.0 1e-68 MLESCLNPELAAEITCQPVRRHHVDGAVLYSDIMVPLALAGAEVRIEPGVGPVLDEPVRT ASDVDRITRRHVEDPSVIEEAARLAITELGDATPLIGFAGAPFTIAAYLVEGGPSRDHLS ARAMMHSDPQTWARLMEWVADLDAAFLAAQLRGGARAFQLFDSWAGSLSASDYRASVAPF SQRALATVDPNIPVVHFGINATHLLSEFAQVAATASRYPVLGVDHRTSLDEACATLMVSG MEMPVQGNIDPALLFAGWEPLESATRDIVAAGRQAPGHVVNLGHGVPSNTDPNVLTRLVE LVHSL >gi|302034478|gb|GL383157.1| GENE 408 438161 - 439516 770 451 aa, chain + ## HITS:1 COG:MT0530 KEGG:ns NR:ns ## COG: MT0530 COG0373 # Protein_GI_number: 15839902 # Func_class: H Coenzyme transport and metabolism # Function: Glutamyl-tRNA reductase # Organism: Mycobacterium tuberculosis CDC1551 # 36 405 66 454 495 129 33.0 8e-30 MGLCVLTVDHAEQGLGVVSEAAAQVDGLGLALTDHPQIRSALVLSTCNRVCLIVETSPEA VAQGFDEAALRRCIADHGANVLAESAQLVCENDAVWRLFRVAAGMESMVFGEREVAGQMK RALSEARREQTVSYTIGHVVEEALKTSRHVATETALAAEGRTVVAVGLDLVAQRMDLDGA RVLVMGTGSYAGASCAQLSSRGVAEIQVHSASGRAAGFARRHRVSEALDIDAALAQADLV VTCRGSGVPALSAEAARRAVDARRGRDLMVLDLAISGDVEEPVPAGVEVIDLETIRQAVP ASAEAERAAAEHIIATGVRHFAVDLERRRMAPAVVALRDVISDLVTAELERLPEEGSVPV YEVAASLRRLAASMAHIPSARARMASEQGLGDRWLNSLSDVLGIDVDIAAPVIDMSSFAN ADCMTCPVTGLRVEDLATDAAPEVRRGHRDR >gi|302034478|gb|GL383157.1| GENE 409 439506 - 441557 1312 683 aa, chain + ## HITS:1 COG:Cgl1500 KEGG:ns NR:ns ## COG: Cgl1500 COG0276 # Protein_GI_number: 19552750 # Func_class: H Coenzyme transport and metabolism # Function: Protoheme ferro-lyase (ferrochelatase) # Organism: Corynebacterium glutamicum # 16 351 9 348 370 229 38.0 1e-59 MTANPYAAPTDPLAPYSAVLVVSFGGPRSPEEVMPFLRRVSHGRIPEERLADVARHYDRF GGVSPINDATDVFVNAIGNELRRHGVRVPVLLGNRNGTPFLEEALTDMHAHGVRRVLAVV TSAYASYSGCRQYREEIATALAHASITDMQVDKVPPFNEAPGFIRANAEALMQAFMRIPP TPLEATRVVFVTHSIPDSMQDASGAGQPGTDYISQHKAVCERVAGQVRQVFGNMPQWDLA YCSRSGRPSDPWLEPDIIDHLRSLPEQGVQSVVVAPIGFVADHMEVVNDLDYEAAEAAKE SGLAFTRAATAGTHPAFIADLAGLILSQAAAARGEGGNLTSWPAPCVAGCCRRYPDAQDI PAVSGGDVESVAAGADVVDAEPGGVDFVPSGSASAVDRPGPEAVELETPPSPYNPLTKET PMSDHSSADSVIEGPRDDEVPAGSYTAPTDPRDTPVIPEEVNASSKWAMYSVFRVATALP AEDDERRRLVEGSDEWAGQSGVDTRGWYDLSGLRANADLLVWWVSDDPAVLQDSYHRFRA SGLGRHLEPVWSNVGVHRPAEFNKSHLPSCFAGIAPRRWAAFYPFIRSKEWYLLPAADRS RMLREHGIVGAASSDVKASTLAAFALGDYEWILALEGDDLARIVDVMKDLRYVEARRYVD VDTPFFTGERVSPVVWADRQMRA >gi|302034478|gb|GL383157.1| GENE 410 441557 - 442261 361 234 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3352 NR:ns ## KEGG: HMPREF0675_3352 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 234 1 234 234 309 99.0 7e-83 MTSLRGLTDPVGPESPQTYWVRRLMLLVVVVVVVALVIAGIAKLAGGSKESAAPAASSFT PDPSWTDTAWASATPSASSSAVSPSRSAPRTESPSPSALASTPSASSTMCEGSQLSVKVT GDTKKPHVGDTETFTVEVSSSTSCHWDTQKVKQTLTVTSGSDRIWSTDDCGSWGPKGVHE IKSKNPWTYKISWPTKRSTGKCKLSQESLGAGYYVATVNLGGGPSGRFVMRMGT >gi|302034478|gb|GL383157.1| GENE 411 442297 - 443397 567 366 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764769|ref|ZP_02171823.1| ribosomal protein L18 [Bacillus selenitireducens MLS10] # 20 358 14 352 360 223 35 2e-56 MNDVQPDPETSREMQAEQVRHLMALLAPGTPIREGLDRIVNGRTGGLIVLGDGPEINGVC SGGFPLDVRLTPQALRELSKMDGGLVVSSDHERIKAAAVHFVPDGSLPTLETGTRHRTAD RLSQQTGVPVVVVSASMSVMSLFLNGRRYLIERPEQLLARANQALATLASYRGRLIDEAE NLTTLEIRDQVQVRDVAAVAQRVEMWRRIDAEVRGYVSALGVEGRLVQLQRNELSLGVED LGRLLTDDYRPNSVAPGGFSLSGLQKLSWEDLLNVTMVAETINLGPAEHPLDSPIRARGH RQLTLMTDLSSRTIQRIIDHFSDLQSLVSASTSELGDIKGVGLRRAREIRQGLESIFEGD QRTHHH >gi|302034478|gb|GL383157.1| GENE 412 443450 - 444847 919 465 aa, chain - ## HITS:1 COG:MT3691 KEGG:ns NR:ns ## COG: MT3691 COG1066 # Protein_GI_number: 15843198 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATP-dependent serine protease # Organism: Mycobacterium tuberculosis CDC1551 # 12 455 10 451 480 402 53.0 1e-112 MARKTQTPTWVCTECGWTTTKWVGRCGECQTWGSVVEKGAPKLTEVTSSTPTSKAVPIGQ VSEQAANRHLTGISELDRVLGGGLVPGVVVLLAGEPGVGKSTLLLDVAAKWAKAGRRTLY VTGEESAAQVRLRAGRTKSLADELYLASETDLGTVLGHIEQTEPSLMVLDSVQTVGTSQA DGSPGGVSQVREVTGALVRVAKRRGMAVIIVGHVTKEGSIAGPRTMEHLVDVVLNFEGDR HSGFRMVRATKNRYGPADEVGCFEMTDAGIMEVPDPSGLFTSDNADPQPGTCVTVTIEGR RPLLSEVQALVAPSASEKYPRRITHGVEGGRVAMILAVLERKAGLPLSNRDVYVSTVGGA RVSDPSADLAIAVSVASAVLDTNFPTRVVALGEVGLAGDLRRVPGLERRVGEAARLGFDL AVVPRNSREAHTKIPTMHGLHVIEVGSVAEALSVLNLRRQRKVNQ >gi|302034478|gb|GL383157.1| GENE 413 444913 - 446538 1253 541 aa, chain - ## HITS:1 COG:MT2394 KEGG:ns NR:ns ## COG: MT2394 COG0281 # Protein_GI_number: 15841835 # Func_class: C Energy production and conversion # Function: Malic enzyme # Organism: Mycobacterium tuberculosis CDC1551 # 1 537 13 547 548 578 54.0 1e-165 MTNPITNRGTAFTRAERLEHGMIGRLPAAVETLEQQAQRCYRQLQGLGCNIDRYVFLEEL QNRNETLYYKLLVDHLVELLPVIYDPTVGEAIKKWSHAYRRSRAVYLSVDHIEDVRPSFE TLELGPDDVDLLVVSDSEQILGIGDWGVNGTDISIGKLAVYTAAAGIRPERTIAVNLDVG TDNAYLLNDPSYLGNRHARVRGERYDELIHEYLEVASELYPHALLHFEDFGASNARRILV QNAANHRIFNDDMQGTAAIVLAAVISGLKVTRQSFADQRLIVYGAGTAGTGIADQIRAAM ISDGLSQQEAVDRIWLVDRNGLVTDDMKGLPDYQEPYAKPVEKTRHWAHTNRHIGLTETI RRIHPTILIGTSTDHDAFTQQVVEEMCREVERPIIMPLSNPTEKIEAMPADVIAWSKGKA LVSVGIPVAPFHYEGTRYEIGQGNNALLYPGLGLGVIVSGAERVSARMIRAAAEAVASQV DPRPAGSSLLPAVENLRASSATVAVAVVQAAIEEGLATKKPSNVVQAVQDAMWWPHYPPV G >gi|302034478|gb|GL383157.1| GENE 414 446623 - 447261 458 212 aa, chain - ## HITS:1 COG:no KEGG:PPA0314 NR:ns ## KEGG: PPA0314 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 212 1 212 212 426 99.0 1e-118 MHVDHLMFAAGPAGLDEDAARLGEILGTSFINGGIHPSFGTRNRILPLSGPRYIEIVEVL DHPAAEKAVFGQAVRARQEQGGGWMGWAVSVDDLAPYEKRLERQSVPGKRTFPDGRHLEW RQIGIKGLMADPQLPFFIKWTSPTELLPSSLSGNVTLTSVEMSGSRQRVEDWLGETIPDE VEGITFNFASPNGHPGIDAVTFDTPSRGCVRI >gi|302034478|gb|GL383157.1| GENE 415 447413 - 448300 543 295 aa, chain + ## HITS:1 COG:MT0518 KEGG:ns NR:ns ## COG: MT0518 COG1082 # Protein_GI_number: 15839890 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate isomerases/epimerases # Organism: Mycobacterium tuberculosis CDC1551 # 18 280 4 280 280 197 42.0 2e-50 MPDCFGLSETTTTSASVAPRVTLSTTSVYPESTADAFARAKAIGYDGVELMVGIDPVAAD VDRIVDLSAEYGVTVSSIHAPCLLVTPNVWGSDPWGKLDNAAEAAGRLGSKLIVVHPPFR WQRDYAGRFEEGIAKFNEKYFPLVFAVENMYPWRTPAGRFAAYSPGFDPTNLSYDHLVLD LSHAATAQMNSRTLVDLWGSRLRHIHLTDGSGTFKDEHLLPGQGNQHAWEVIERAVTGGF DGDIVLEVNTRKFSGEGAGQGARFEALSETLTQTRLAIDRGIFARRSGQAWEGAR >gi|302034478|gb|GL383157.1| GENE 416 448363 - 449259 448 298 aa, chain + ## HITS:1 COG:MT1225 KEGG:ns NR:ns ## COG: MT1225 COG0506 # Protein_GI_number: 15840631 # Func_class: E Amino acid transport and metabolism # Function: Proline dehydrogenase # Organism: Mycobacterium tuberculosis CDC1551 # 13 298 26 321 329 140 36.0 2e-33 MRLAMDPTIAHKVSRSRIAREIAVTYVAGEDVASAVDKAADQVSKGLDVSLHPLDPDPAD LAQARRAMVRLCGVIERLGADPSFNGHAEVSISLAALGLKVSDDLARDHARQVCQVARDN HVAVTVDDEGPDIHDRSHRIVMDLLSEYENTGIVIQAARHDSLMQVRELAAPGRRIRLCK GSYTGPRSVTLIRPHDVDLRMAACLRALMTGPSTVMLASHDPVFVALGEQLMASLDRQLE FQMLQGIRPLEQRRLVDIGHRMRVYLPYGHDWYRYCTRRIVERPGNIWLFGRSLVERR >gi|302034478|gb|GL383157.1| GENE 417 449370 - 450095 569 241 aa, chain + ## HITS:1 COG:Cgl2838 KEGG:ns NR:ns ## COG: Cgl2838 COG1266 # Protein_GI_number: 19554088 # Func_class: R General function prediction only # Function: Predicted metal-dependent membrane protease # Organism: Corynebacterium glutamicum # 11 241 2 217 219 127 38.0 2e-29 MFVLAVSLGQSAWYSILRMIERLTRGVPMNQQTSTLNSSVTPGRPWLDLLYQLSDIAFGV VPALLAVLLLAQVKPPRQGVRRALGLEAPGWGRDVGAGAMLAAIIGIPGLGFYWAAHALG FNTTVRAADLQHVWWTAPVLIGLAGMNAVLEETVMIGYLFTRWGQIGWSTTMVIFTSAII RATYHLYQGWDDFIGNIVMGLFLGWVFSRRCRLLPLIVAHAFLDIVSFLGYAYLAGRVSW L >gi|302034478|gb|GL383157.1| GENE 418 450140 - 451183 696 347 aa, chain + ## HITS:1 COG:MT3811 KEGG:ns NR:ns ## COG: MT3811 COG0136 # Protein_GI_number: 15843328 # Func_class: E Amino acid transport and metabolism # Function: Aspartate-semialdehyde dehydrogenase # Organism: Mycobacterium tuberculosis CDC1551 # 4 347 3 344 345 391 64.0 1e-109 MGIMKLGVFGATGQVGRVMRTLLAERHFPADEVRFFASARSAGQKLSWNNGSGDSEVVVE DTATADFAGLDIAIFSAGGGTSREFAPRVAAAGAVVIDNSSAWRRDPDVPLVVSEVNPED VAKRPKGIIANPNCTTMAAMPVLKPLHDAAGLTRLVVATYQAVSGSGVAGVRALTDQTTA IDDPAGLALDGRGVPVADLGPYVAPIAFNALPVAGNFVDDGSGETDEEQKLRNESRKILH IPDLLVAGTCVRIPVYSGHGLVVHAEFRESLSPEKATELLTQAPGVRVVDVPDPRSAAGI DPSLVGRIRADQSAPAGKGLVFFCAADNLRKGAALNAVQLAELVAAE >gi|302034478|gb|GL383157.1| GENE 419 451216 - 451971 589 251 aa, chain + ## HITS:1 COG:Cgl0406 KEGG:ns NR:ns ## COG: Cgl0406 COG0345 # Protein_GI_number: 19551656 # Func_class: E Amino acid transport and metabolism # Function: Pyrroline-5-carboxylate reductase # Organism: Corynebacterium glutamicum # 4 250 18 270 273 145 42.0 9e-35 MAGALVGGLIDAGQMKAEDVVATARSASHRDEIANTLGVTTSGDNTTAVRDADLVILGVK PYAAVDVLEEVSGALKADAVVVSIAAGVTTEKLLMAWQGKIVRVMPNTPVRVGKGAFIVS SAPGSEDAAKKVGDLLESVGVVVTVPEELHNAATAVSGSGPAYVFLVAEAMIDAAVALGV PRDQASQLTVATLAGSAELLAGGEHPAVLRSKVTSPGGTTAAAVAALEAGGVRSVFADAM TACRDRAAGLS >gi|302034478|gb|GL383157.1| GENE 420 452035 - 452208 114 57 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSVGQELRTYLGAPSFQFQRKRLTVGSVIKKRRKRMAKKKHRKLLKKTRIQRRRAGK >gi|302034478|gb|GL383157.1| GENE 421 452334 - 452567 164 77 aa, chain + ## HITS:1 COG:no KEGG:PPA0321 NR:ns ## KEGG: PPA0321 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 77 37 113 113 151 98.0 1e-35 MCDEVIGLVARLRQEHRDLVPEPMIVDVDANEDFRSRWGDHVPVIFVDGTLISYWTLDAD TFLSALRDGPSLPAVLP >gi|302034478|gb|GL383157.1| GENE 422 452691 - 454406 1214 571 aa, chain + ## HITS:1 COG:Rv0511_2 KEGG:ns NR:ns ## COG: Rv0511_2 COG1587 # Protein_GI_number: 15607652 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III synthase # Organism: Mycobacterium tuberculosis H37Rv # 287 564 1 275 275 300 56.0 4e-81 MTDEAHQPTPQPAGDLGTASSQARVQFVGTGPGDPNLLTLGAVDAINRAQVIVISCAEHR MLLGSDFLGLRPDVRIVLAGGVDEEAAVLPSQPGTGAPTPVDVDEHCADVTATVIDAASQ GLEVVRLVSGDPFLDGDIGAEAAAVARADYDVDVVPGVTGMTAVPEYAGLTLHGHDVQLI GDAACQRDIAGHGSNWSDQGLVVVNTEAGKLKEVVKHAIESGRGEDEPAALICHGATTQQ TTHTVTLGELPQTAKTARLGDAEPVHVAIGKVVEAPEREQLDWYESKPLFGWNILIPRTR DHSATLPSRLQSYGAHSLDVPTISMEPPRTPQQMDKAIRGLVEGRYEWVVFTSANAVRAV SEKLEQIGLDARAYSGLRIAAIFDSTINALAEWGVRPDFVPSGEQSTRALAAVFPAFDEA LDPINRVFVPRADIATESLSADLSELGWEVEDVVGYRTVRAAPPPAETREAIKTGKFDAV VFTSSTTVRNLVGIAGKPHKHTVVAAVGMRTAETCREHGLTVDVIAPEPTALSLADALAD FAAKRRDDMVAKGLPVVRPSQRKRRGRHPSR >gi|302034478|gb|GL383157.1| GENE 423 454477 - 455145 487 222 aa, chain + ## HITS:1 COG:Rv0525 KEGG:ns NR:ns ## COG: Rv0525 COG0406 # Protein_GI_number: 15607665 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Mycobacterium tuberculosis H37Rv # 1 202 1 200 202 185 53.0 5e-47 MGATTTVHLLRHGEVDNPTGVLYGCMPGYHLSPLGRRMAARAAEHFAGAELSALVSSPLE RARETMAPIAALHPGLEVRIDSDVIEAANVFEGQVFGKGNKALRSPRNWRYLSNPLTPSW GEPYVEIAERMTRAIMRAAEEVPAGGQALIVSHQLPIWIARCAAEGRRLPHDPRFRKCTL ASVTSFGVLHGRIVRVDYCEPARDLIPAKDRRANISAGGAQG >gi|302034478|gb|GL383157.1| GENE 424 455142 - 455711 382 189 aa, chain + ## HITS:1 COG:MT0548 KEGG:ns NR:ns ## COG: MT0548 COG0526 # Protein_GI_number: 15839920 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Mycobacterium tuberculosis CDC1551 # 4 187 16 205 216 107 36.0 1e-23 MKTRLIATLAAATLVVTGVSACSSTSASDDKGFAAGDGSWSKLPADKREPAAVLTGTDLN GKKISTADAKGKVIVVNVWGSWCAPCRHEAPALVKAADSTKNVAAFYGINTRDLDPGPPQ AFSRTFHISYPSFYDPDGALLLKFTELPPKAIPSTLVIDRKGRSAARFVGEVSTATLVQA INDVAKESQ >gi|302034478|gb|GL383157.1| GENE 425 455759 - 456469 578 236 aa, chain + ## HITS:1 COG:ML2411 KEGG:ns NR:ns ## COG: ML2411 COG0785 # Protein_GI_number: 15828297 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Cytochrome c biogenesis protein # Organism: Mycobacterium leprae # 4 226 16 251 262 125 38.0 6e-29 MAGAIPVAVFAGLLSFFSPCVLPLIPGYLSYVTGLGAADVIEGQRRARTVVGTVLFVVGF TVVFVATGTIIGTLGKVLVGHRRAIEIIVGALTVVLGAMFAGLVPLGRRELRIHRLPRAG LAAAPILGIVFGLGWTPCIGPALSVVYGLSLTQGSAVRGAVLAICYSLGLGIPFIAAAAA VVWMGRTIDAMRTHQHGVQRFGGILLMTVGVLLVTGWWESIMAMLRAWAAKFGAVI >gi|302034478|gb|GL383157.1| GENE 426 456547 - 458058 1132 503 aa, chain + ## HITS:1 COG:Rv0528 KEGG:ns NR:ns ## COG: Rv0528 COG1333 # Protein_GI_number: 15607668 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ResB protein required for cytochrome c biosynthesis # Organism: Mycobacterium tuberculosis H37Rv # 4 474 1 492 529 241 36.0 2e-63 MRWVWGQLTSMRTALILLFLLALAAIPGSVVPQSAQSAMKVSDFAANHPTLDRICRPLGM YHVYTSVWFSAIYLLLLISLIGCIVPRIVSHAKALRRQPPRVPARLDRLAAHASMITSAS AAEVSQRAQQWLTSHRYRFVVDDDGSLRAEAGRHRETGNLVFHIFLVFVLVGVGWNTLWG FKGTSVVVEGQGFSNSITQYDEFKAGAMVDTDNLTPFSMKLRKFVVSFETGTVQRGAARS FDATVDLTMGGKTQTRDLQVNHPLRIGSTKVHLLGHGYAADVVVRDGDGKVAYSGPVVFL PQDANFKSVGVIKVPDARPDRLAFQGFFLPTGAITAGGPTSLFPDALNPQLYLTAWYGKP TVETGVPSNIYTLDTTGLTQVTNGKDKARFVLSPGQRYKLPDGKGSIQFNGWQRWAKIQV SQNPGLPLTFLSVVLSVAGLCVSLFSRSRRVWVRTIPGDDGLRVEIGGLDRSDSRSGAVD DVNSLLAALHGDSMSGDVGEEHS >gi|302034478|gb|GL383157.1| GENE 427 458055 - 458948 768 297 aa, chain + ## HITS:1 COG:ML2409 KEGG:ns NR:ns ## COG: ML2409 COG0755 # Protein_GI_number: 15828295 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in cytochrome c biogenesis, permease component # Organism: Mycobacterium leprae # 42 297 70 326 327 183 40.0 3e-46 MSVENLSAVGIVTAAVLYMLAFLAHAVEWASVRGTEHPSHEERLRSETWGRMGLNLTVLG AACAAIGVVCRGIAAHRLPWGNMYEFVTSALFFVVIAYLVLVAIHHVRWMGIAVTLLLAV GNGLAATVFYVAVAPLVPALHSVWFVIHIVAACIAAAALNVGAIASIMYLIATNAQAKAQ RTGVPVKGLVAKLPPLESMDALAYRAHAIGFPIWTFTIAAGSVWADYAWGRFWGWDPKET WSLVTWVVYAAYLHARSTAGWRGRRAALIAIVGAACFWFNFVGVNLIFNGLHSYAGI >gi|302034478|gb|GL383157.1| GENE 428 458950 - 460398 1095 482 aa, chain + ## HITS:1 COG:no KEGG:PPA0329 NR:ns ## KEGG: PPA0329 # Name: not_defined # Def: putative sigma subunit # Organism: P.acnes # Pathway: not_defined # 1 482 6 487 487 891 99.0 0 MTGSFSESRDDWLPQLYQERWDAFVRLATLLLADQQVAEDAVIAAFATSYLRDPKLHSYE HAVSYVRTAVVNKARSRQPAERDATPPETPEDLAYWCLRGLLARQREVLVLKLATPDLSD DDIAETLGMSVSAVRNNETKGLIAIGERLRPGSQTNPGHADPRVEAVVRSALETFAESIH PMSRYDAIISQIACRPHRGRPTTWVIVLACGLAFLVGVLLPLLGSGNGSTMGDPEALPSI RTPESSSQSLSTLQTGLDVFYLGRDDGLIHRELRDLPTSGDRLGTAVGAVLNVAPLDPNY TSGWAAGQVKRATVKGNRITLDLSASAFSQFKNGEQVQRAIQQLVATATAAVGDRTGDKS VRILVDGSPNLPIIGKPATDFVDEGFARCARVWVDSPQAGADMSAGTITISGVAQPTVSV MSYEVRPPQSSRIITSGQINLSANDGDKWRPWHATFTMPKGEYDLIIREGTHIADEKVIT AK >gi|302034478|gb|GL383157.1| GENE 429 460410 - 461204 520 264 aa, chain - ## HITS:1 COG:RSc2321 KEGG:ns NR:ns ## COG: RSc2321 COG0300 # Protein_GI_number: 17547040 # Func_class: R General function prediction only # Function: Short-chain dehydrogenases of various substrate specificities # Organism: Ralstonia solanacearum # 14 263 12 261 275 179 41.0 7e-45 MNDMEATRDERPWALVSGASGGLGQAFSRHLASCGVNLVVTGRRHDVLDDLADQLTTRYG IQTIVHPCDISSASERLALVNEIAGRGIIIDTLVNNAGFGAAGRIAETDPERQTSQVEVN CEAVVHLCGLLLPGMITAKRGSIINVASTAAFQPIPQFATYAASKSFVLSFTRALWAETN GTGVRATAICPGPTETGFFDVAGVPRMAAGARRDPDDVVRTAFDALARHRPYAVDGFVNR TVARLAPHLPARLVMTQAEKYLQV >gi|302034478|gb|GL383157.1| GENE 430 461421 - 462302 229 293 aa, chain - ## HITS:1 COG:no KEGG:PPA0331 NR:ns ## KEGG: PPA0331 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 293 65 357 357 590 99.0 1e-167 MCEMLHEKKIEQRTIERQNYNLFNRFRLQIGDLCDRFNSYYYNRAKTVDQKIFYDICSTY KQNARPTTSVTELRSCLCDTAARCNATPHAVWAAAEQYMSHSLRAVRNSLDYTKPNYWIR LLLSVIFITLMCLVCDLPRVIKSLSIIESIGFIIATALFTADFVFIFLPVTTQWLRVNKL STKFLEVLFSVFSFLIVYQFQASKMTSASTPYLMVDIWLIVAIFIMWLITHNKANEVVSQ QDHIRDLQDQLQTLRMSEPQQIVEPDTVGHAPKESSRLRLLGMVINPFQRPRF >gi|302034478|gb|GL383157.1| GENE 431 462704 - 463408 440 234 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3373 NR:ns ## KEGG: HMPREF0675_3373 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 234 1 234 234 371 100.0 1e-101 MFTLTSTPVTFIGLLILFAWSLVWSVRDAIKAPTVVTRISTWVHVVMAVTMILMVPKSWW KPIVPAIGGPITPVIIFAICTAWMVFMAAWRSSWSSWGHAAMFAAMVWHLAAMRKMSSLM TAPRDSGMGQMNHTHSGMHGPGMQTAMNAAMHDYAVVGVPLMVALLAMAVAGLWRAISGR AENPGKAPTCHVVATEPLAIRLSGLADFAMAFGMAWMSTGLLSPVMPFTAHLHP >gi|302034478|gb|GL383157.1| GENE 432 463532 - 464932 415 466 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 1 455 1 448 458 164 27 7e-39 MEHYDIVVIGSGSGNTILDEDFADRRAAIIDSGAFGGTCLNVGCIPTKMFVLPADFASSP SEAVRVGVDLQFRGASFASIRDRIFGRIDSISKAGLSYRQGLDNIDVYTGEAAFIDAHTL EVGGRCITADQIVLAAGSRPRVPDVPGLDDPSMAGLIHTSDTIMRLAELPQRLVILGGGL IAAEFAHIFSGLGSQVTVINRSGRMLRHEDREISQRFTEQMGRRVRLRMAEGLVGVDRDP GGHLVVLTVDGDGVDYDYPADVVLNATGRVSNGDRLNLPAAGVDVDDDGFVVVDKHQRTN VEHIWALGDVCSPWELKHVANHEARVVRHNLLHPDDLASSNHCFVPHAVFSNPQVASVGA TEQGLLQSDTPYAAYLQEYADVAYGWAMEDEGHCVKLLGDPQTRTLLGAHIIGPQASTLI QTCIQGMSVGQTVDEMARGQYWIHPALSEVVESALLGLGKEMDTTR >gi|302034478|gb|GL383157.1| GENE 433 465015 - 466031 1002 338 aa, chain - ## HITS:1 COG:Cgl1589 KEGG:ns NR:ns ## COG: Cgl1589 COG0614 # Protein_GI_number: 19552839 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Corynebacterium glutamicum # 55 335 2 279 282 141 29.0 2e-33 MSTPHTRRRATRVTAAVLTGLCAISMSACAGSSTEKSSSSSSGPARTVMSCNEKLTFTSV PKRVIMLGDTDASTMNALGVLDHVVARAGRIKEGAYDAKTLAKLKAIPTIASQELNTGGV KVSTETILDQHADLVIGYDTGVDRDALRKSGVKMYSTDAMCTDKKPPAPATFSQVKDEVT KVGQIFDVPDKAKQVNKELDAKISTIQKQTASGAKANAVALYITPGSTEFYTYGSSSMIE PMFAANGLRNMYHSNTTRVFDADMEDLLHKNPEWIVLLAGDGAMSKVEPTFLSFKGAKEL KAVKKGHVVTMSFSLTDPPTPLTITGTEKLHDLIKDKK >gi|302034478|gb|GL383157.1| GENE 434 466043 - 466801 231 252 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 236 1 245 245 93 28 1e-17 MINASQLVVRRGQRIVLENIDFSAGQGVTVGVVGPNGAGKSTLLSALYRNVSIASGQVTV SDHDLASMSRREIAREVAVVSQTPDPSLPLTVRDTVALGRLPHRSLMGYGDAADRNIVEE ALTRTDLTDLADRLVTQLSGGERQRVLVARAIAQQAGHLLLDEPTNHLDIGHQFALLDLV RTIKATTVIVLHDLNLAARVCDQLVLLAEKHLVATGSCEDVLQPDLLSKVYEVNVERITH NGHIHLLFNPPR >gi|302034478|gb|GL383157.1| GENE 435 466798 - 467832 799 344 aa, chain - ## HITS:1 COG:Cgl1588 KEGG:ns NR:ns ## COG: Cgl1588 COG0609 # Protein_GI_number: 19552838 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Corynebacterium glutamicum # 10 340 20 354 358 197 43.0 3e-50 MAFLVRSLHRRTPVRFILLVALLVLTPVLSIAFGAAPVPIGQVLGVLADHCGLPVHLSWD SITDAIVWQNRMPRIVTGLGVGAILGAAGVTLQAVVRNPLAEPYVLGVSAGASSGDATAI ILVGISSTFGVAGMAFLGALASTAIVLFMGGGRNSSTLRLILAGLAVGFVFQALTNFIIF SSDSPETARAVMFWTLGDLSRASWAQGWTSIVVAVVLSILLWICAPWLDALASGDSTATA VGIDPAMIRVLLLVPVSAGVAIAVAISGGIGFVGLVIPHLMRSFIGHGHRRLVVSSAIAA AIFLVWADTFSRTVFSPAELPIGVITGLLGAPFLLVLVKRETLA >gi|302034478|gb|GL383157.1| GENE 436 467714 - 468019 124 101 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGTGAAPKAIDSTGVRTSNATSRMNRTGVRRCRDRTKKAILVGAESRGRRVSVVREVFGL GIIRTSAFPGCSQWLATRPSALPLRVSPRFSRGSLRRTAVL >gi|302034478|gb|GL383157.1| GENE 437 468061 - 468948 680 295 aa, chain - ## HITS:1 COG:Cgl0645 KEGG:ns NR:ns ## COG: Cgl0645 COG2375 # Protein_GI_number: 19551895 # Func_class: P Inorganic ion transport and metabolism # Function: Siderophore-interacting protein # Organism: Corynebacterium glutamicum # 6 291 4 294 299 125 32.0 1e-28 MAEYRPYLMRLSSRSLVEPNFIRLILTGDEVRFPQPCLDRRIKLLFIGEHPNPALTDPKV GDGWYQLWLDDPARPEMRTYTVRRVIENGIVIDVACHDGDGPGHRFATSAPLGSQVLVIG LDATAPGAEQTGIDFHPGDAKRLLILGDDAAAPAVCSILEQLPTHAAEVEAVVEVPQLAR KIEAGPDGHWTDSRGNRINIRWQERLSERGDRLAEAIEDHLHRFPLPRCQQDSPEEGPDD LLWDTPASPPQEFYSWIAGESTMVRRLRRILVNDHGVDRRHIAFMGYWRHGSAGM >gi|302034478|gb|GL383157.1| GENE 438 469175 - 469951 201 258 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 1 221 1 210 311 82 26 4e-14 MAKRIETKDLDIYYGSFHAVESVNLIVEPRTVTAFIGPSGCGKSTVLRTLNRMHEVIPGA YCTGKVELDGVDLYGKGVDPVAVRRNVGMVFQRANPFPAMSIRDNVVAGLKLNGVRDNKL LDEACEKSLRGANLWDEVKDRLERSGASLSGGQQQRLCIARAIAVEPEVLLMDEPCSALD PISTLAIEDLVSELKERFTVVIVTHNMQQAARVSDQTAFFNLKAQGEPGRLVEIDTTERI FSNPKEKATEDYISGRFG >gi|302034478|gb|GL383157.1| GENE 439 469970 - 470896 954 308 aa, chain - ## HITS:1 COG:Cgl2519 KEGG:ns NR:ns ## COG: Cgl2519 COG0581 # Protein_GI_number: 19553769 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, permease component # Organism: Corynebacterium glutamicum # 26 302 24 303 307 218 44.0 1e-56 MSATTPDHITHHGDNTPGQLDLSRPSGKRTIKSGCASAFMIVATVLAVIPLAWLLFAAVR RGIGSLFHASWWTHSMDPSFDLAEQGAIHAIVGTLEIGLITSIISVPIALMTAIFLVEYA RGTKIAKVISFAVDVLTGVPSIVAALFVFAVVVTTFGGTQSAWASSLALMILMVPTVLRS TEEMLKLVPDSLREASFALGVSQWKTIMKVVLPTSMTGILTGIVLGLARVMGETAPLIVL LQFNTELTFNPSTPNFATLPTVITNAYTQGGVDTPVVWGAAITLIILVMGLNLIARRISR RYMRRMGK >gi|302034478|gb|GL383157.1| GENE 440 470893 - 471897 797 334 aa, chain - ## HITS:1 COG:MT0956 KEGG:ns NR:ns ## COG: MT0956 COG0573 # Protein_GI_number: 15840352 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, permease component # Organism: Mycobacterium tuberculosis CDC1551 # 5 332 3 322 324 226 45.0 5e-59 MAETTSPAQRKLTAASRMKPVSRVGDTIFAGASSVIAIALAIIVILMFVFLMKTAAPTLL ANTDNFFTSRAWTTDQNPPAFGIQALLWTTVISSLLALLIAVPLSVGIALFITQLAPRKL ASPVAFVVDLLAAVPSIVFGLWGGIVFGSSGIINGLRGAIIKALGWIPIFSEDPSWSSAT GTVYLASLVLAIMILPIITAVSRDVMAQTPHDQVEAALALGSTRWEVIKLAVLPHSRSGI ISGSMLGLGRALGETLAVTLILQTMSTMALKQNLNLSIFVGGETFASKIAGNFSEAISDP TSLGALVASALALFVITFVVNATARLIAAKGVKR >gi|302034478|gb|GL383157.1| GENE 441 472006 - 473157 1125 383 aa, chain - ## HITS:1 COG:ML2192 KEGG:ns NR:ns ## COG: ML2192 COG0226 # Protein_GI_number: 15828172 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, periplasmic component # Organism: Mycobacterium leprae # 12 382 72 428 429 227 39.0 4e-59 MNRFAKITALAAISAISLTACGANGDKGSSSASSSKTTSTASSAAQPSDSSADAVSFKPA CPGGSISGAGSSAQLNAINQVISDYKAACSSATVNYSPTGSGAGVKSFIGRQTDWAGSDS VLNADKGEPDKAKQRCNADPWHLPMAAGPIAVVYNVDGVKDLTLSTATLAKIFSGAITNW NDDAIKKENPKAALPSAQIEVFYRKDESGTTDNFTKFLNKAAGDIWTEKHSKTWKGAGKG ADKSAGIAQAVKSTKNSISYDEWSYATKNSLDMAAIDNGNGPVKLTGESAGKAVSAAKVV GQGHDLQLELQYKNTPAGVYPAVLVTYEIACSKGQDSGKAALLKDFLSFYASEREQKKIQ DLGYAPLPSDVASKVLGSAQALS >gi|302034478|gb|GL383157.1| GENE 442 473330 - 474271 625 313 aa, chain - ## HITS:1 COG:Cgl1286_1 KEGG:ns NR:ns ## COG: Cgl1286_1 COG0494 # Protein_GI_number: 19552536 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Corynebacterium glutamicum # 7 144 62 188 194 97 42.0 3e-20 MGGHKGPIQAAGAVVLRDIDDGAREVLVVHRPSYDDLSLPKGKLEPGEDLPTTAVREVAE ETGINIRLTMPLQPIEYTVKYSTRDGKPKSRAKVVSWWLGVAIGGSIENATASPEEIDGA FWMPTDQALERLTYPTDVQVLEEALDLPSTSTIILVRHGKAVSRKEWNSRKRHGKDATRP LERRGRRQAKALADLLSAFGVARLASSSSTRCMQTLQPYADTIGAQITGLDALSEETYEA DPHKATSAMRKIIGRALADPNQPIAICGHRPVLPTMRDALGGANRPMSTAECLIVHLDET GRTIRQEWHSSRY >gi|302034478|gb|GL383157.1| GENE 443 474279 - 476384 1654 701 aa, chain - ## HITS:1 COG:Rv2984 KEGG:ns NR:ns ## COG: Rv2984 COG0855 # Protein_GI_number: 15610121 # Func_class: P Inorganic ion transport and metabolism # Function: Polyphosphate kinase # Organism: Mycobacterium tuberculosis H37Rv # 15 697 46 740 742 728 57.0 0 MAKKPTPGTSPSSPDELPEGRYSDRELSWLAFNERVLDLARDTERIPLLERAKFLAIFSS NLDEFFMVRVAGLKRRIDAGVAVPSVAGMLPRELHDAILARTHDLVSEQSRVFAEEVRPG LVDEGIEILRWAELSDDEKGRMRTLFSERIFPILTPLAVDPSHPFPYIRGLSINLAVMLA NPITGAEQFARVKVPSVLPRLVNLGEGRFLPLEEIISRHLDQLFTGMHVLQHTTFRVTRN EDLEVEEDDAENLLFALEKELLRRKVGRPPVRLEVQDDISAEMLELLTRELDIRDKEVFR LPAPLDLTGLFSLADVDRDDLSYPNFLPITHPHLAEVETARPADMFAAIRRRDVLVHHPY DSFATSVQRFIEQAAQDPQVLAIKQTLYRTSGDSPIIDALVDAAEAGKQVLAVVEIKARF DEQANITWARLLERAGVHVVYGMVGLKTHCKLAMVIRDEGEGLRRYAHIGTGNYNPKTAR QYEDLGLLTSNPIITEDVARLFNHLSGMTAEKRYRRLLVAPESIRSGIIDAIEREIDNKK AGLPAGVRIKVNSIVDERVIDALYRASRAGVPVDLWVRGICSIRPGVPGLSENIRVISIL GRFLEHSRIFWFANGGRPMVAIGSADLMHRNLDRRVEALVGLSNKQHVAEVEEMFDMAFD PGTVSWHLQDRTWTEVSRGPDDIPLTDLQEELIRRTRDRRR >gi|302034478|gb|GL383157.1| GENE 444 476506 - 477150 593 214 aa, chain - ## HITS:1 COG:MT0840 KEGG:ns NR:ns ## COG: MT0840 COG0745 # Protein_GI_number: 15840231 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Mycobacterium tuberculosis CDC1551 # 13 209 28 231 268 170 45.0 2e-42 MARLSLLGPLDAPLPQALELLPHSISRYDDLKECMSHLEGVDVVLVDCHDEPAKAREACL RLSCHERRVPVLLLVGSDTLSVISPDWGMDDFLCDSATPSEAETRLRCLFTIQVTNQLVA GPFTVDEDGYTASVGDKDLDLTYTEFELLKYLVGHPGRVLTRDLLLSDVWGYDYYGGTRT VDVHIRRLRAKVGPEYEGHIQTVRSVGYRFQAER >gi|302034478|gb|GL383157.1| GENE 445 477155 - 478162 404 335 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3387 NR:ns ## KEGG: HMPREF0675_3387 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 39 335 1 297 297 564 99.0 1e-159 MPSHAEIALFEIMSSTMSHPIIPRGTEPSHNIGTTICVVTRMPDEWFRPDEEESGPGEPC PAESVEGPQENENPPSRHADSEETPISSTTSGTIRVLTDDTGPSVVVGHARATGASASSH HRHFPIWILGVAAALVVGLVLGTFITQSRDSTGAAQIAPRALVPASTSTADMPYQGKVKA IGGVKATASCVSDPAVGSRHELVRYDAKYVVDDKPETAWRCNGSGEGQQITLTLPHPSRI VGVGMINGYAKVFGNVDLYPQYRRVRTVRWTMPDGTWFNQDFTDDDQDLQKVMIAPRTVK GDITLTIIASTQPGSLGEPTRDSVLISSVQLYEES >gi|302034478|gb|GL383157.1| GENE 446 478177 - 478614 402 145 aa, chain - ## HITS:1 COG:Rv1897c KEGG:ns NR:ns ## COG: Rv1897c COG1490 # Protein_GI_number: 15609034 # Func_class: J Translation, ribosomal structure and biogenesis # Function: D-Tyr-tRNAtyr deacylase # Organism: Mycobacterium tuberculosis H37Rv # 1 140 1 142 143 166 59.0 1e-41 MRVVIQRATSAEVVVEGRTVGSLTTPGLVVLVGVTGTDTATTAEKLAEKVWGLRILSEEK SASDLNAPLLVVSQFTLYASTRKGRRPSWSAAAPGPVSEPLVDHFVTHLRSLGAHVETGI FGADMKVGLVNDGPMTILIDTDDWH >gi|302034478|gb|GL383157.1| GENE 447 478810 - 479310 478 166 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3389 NR:ns ## KEGG: HMPREF0675_3389 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 166 1 166 166 336 100.0 3e-91 MPFQIPDDLNRDLMPLAWMIGHWEGEGHGNTPDDGEFSFGCQVDFTDNGGDYLHYICQTF TMNPDGTPAAPLRMETGFWRPNVDTRKVDVLMAAPEGWAEVWTGNIDGAKIELVTDAVAR TEEALVPYTGGQRLYGQVEGDLLWTFDRATVDAPLQPYMWARLKRS >gi|302034478|gb|GL383157.1| GENE 448 479312 - 480253 631 313 aa, chain + ## HITS:1 COG:ML2203 KEGG:ns NR:ns ## COG: ML2203 COG0354 # Protein_GI_number: 15828181 # Func_class: R General function prediction only # Function: Predicted aminomethyltransferase related to GcvT # Organism: Mycobacterium leprae # 10 304 17 352 373 150 35.0 3e-36 MSDPVLLTDGPDTGLVSHMRNPIAEQRLMVDGGGSVELSNREVLAISGVDRLGWLHSLTS QFLDGMEPGRTTTSLVLSPTGHVEHVLHGVDDGQTFWAWTEPGRGADLAAWLDSMCFMMR VEVALRPDMTVRWFGHDFAVSDGVVLDSEVAGGHEVILPVDAEIPGDADPVGVLAWEALR IAAGIPRIGLDTDDRTIPNEIGLYGTHMDKGCYRGQETVARVYNLGRPPRRLTLLQLDGS RAELPEVGADIHAGGRRVGAMGSSANHGVDGPIGLALVRRGVDVGLELEVDGIAAGQQPL VDPEVGLHVCPVV >gi|302034478|gb|GL383157.1| GENE 449 480294 - 481679 1100 461 aa, chain + ## HITS:1 COG:CAC2330 KEGG:ns NR:ns ## COG: CAC2330 COG2148 # Protein_GI_number: 15895597 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sugar transferases involved in lipopolysaccharide synthesis # Organism: Clostridium acetobutylicum # 2 449 3 449 461 257 33.0 3e-68 MKKDYFNRTQKLVTVLIDAIVFAVGIFLSFWMRFGMVIPQRNLDDGKAALMASVIAFLII NVLSGVYVLYNKTLLDIGIIAVVDQVMVTIVIMALTFFGRWFAFPRSVLLINLVVGIVLL LVWRSVEVVAYRHLRGAKRVMLLGPPEMLNRAVMNYMANKATRHRLTHVVRGHYLEQIRS HINEFDTAHVSDDIPSSERVAIYDLLLSEDKEIFMSTSFEHMMLINPTIMSIEDETIIAA SPFKIPAEMDIVKRFFDILLSLIALVVASPIMFVTAILVKASSPGPVFYRQTRITKDGRE FKILKFRSMGVMAEKESGPMLATTNDPRVTTVGKYLRSLRIDEIPQLINVLIGDMSIVGP RPERPFFVDQFQEQNAHYTLRHNVRAGITGYAQVYGKYASDFAAKLNFDLIYIKQYSLVL DVKIMIQTIKILFDKVSSRGVDETAEPDENIHLPAEVQQLN >gi|302034478|gb|GL383157.1| GENE 450 481702 - 482439 671 245 aa, chain - ## HITS:1 COG:MT0502 KEGG:ns NR:ns ## COG: MT0502 COG4221 # Protein_GI_number: 15839874 # Func_class: R General function prediction only # Function: Short-chain alcohol dehydrogenase of unknown specificity # Organism: Mycobacterium tuberculosis CDC1551 # 3 242 9 246 251 218 53.0 1e-56 MTKTAVVTGASSGIGAATARALAGDSWHVICAARRVERIEPLSAEIGGQAVVCDVTSDES VTNLVKTVGGKVDLLVNNAGGAVGQEPVTEADLNAWTTMYQTNVLGMGQVTKALLPALEI AEGTIITITSTAAEWGYEGGAGYCAAKSGERAVVEALRLELCGHPVRVCEVSPGMVHTEE FSLVRFHGDQAKADKVYQGVDSPLVAADIAECVRWISGLPSHVNIDRMIVRPRAQAAQYK VARES >gi|302034478|gb|GL383157.1| GENE 451 482515 - 484188 1295 557 aa, chain - ## HITS:1 COG:Cgl1887 KEGG:ns NR:ns ## COG: Cgl1887 COG1080 # Protein_GI_number: 19553137 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) # Organism: Corynebacterium glutamicum # 4 552 13 568 568 390 46.0 1e-108 MRTLSGLGVSAGVGQAHALVVSPAPGLPASDPSRGAEADLAKVEAALGKVADRLDERSLH ADPSALAVLQATAMMARDPGLLTSVKSHLSDGHGPAHALWAAFDDFCAQLSAAGGYLAER VTDLRNVRDRAVAVMQGLPEPGVPSFDSPVILVAEDLAPADTATLNPELVRGLITAAGGP TSHTAILASQIGIPAVVRCSEARDIEDGTPLALDGVTGTVLVEPDEASVSELTERANRRA EVLASAPDGDATLTDGERILVLANIGNPSDAPTAKKKGAEGVGLFRTEFLFLDRQDAPTI DEQTEAYATVLKTFDEGAKVVFRTLDAGADKPLAFANLGAEENPALGRRGLRLSQVRTDL IDAQLEALAKAAEQTGRDPYVMAPMVATKAEAEWFSSRARAAGIKTVGIMVEVPSTALRS SQVLEPVDFASIGTNDLTQYAMAADRLQGELAELLTPWQPAVIQLVKATCDGAGERLIGV CGEAAGDPLLALVLVGVGIRSLSMAAGKITAVKAALSRHNLEQCRRIADAALAACSPEEA RTAALKLADPSVEVLVS >gi|302034478|gb|GL383157.1| GENE 452 484193 - 484459 268 88 aa, chain - ## HITS:1 COG:PA4466 KEGG:ns NR:ns ## COG: PA4466 COG1925 # Protein_GI_number: 15599662 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, HPr-related proteins # Organism: Pseudomonas aeruginosa # 1 79 1 79 90 61 45.0 3e-10 MPSRTTTIAAESGLHARPAAMFVQAASKSGLAVKIGRPGEEPVDARSILSVMGLGAKHGE TVELTAEGDNADEVLDALVANLQTDPEA >gi|302034478|gb|GL383157.1| GENE 453 484555 - 485358 223 267 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 [Bacillus selenitireducens MLS10] # 8 233 3 225 234 90 32 1e-16 MVDEHTPPVVAVVVAAGMGTRFGGSVPKQVTSLTGKAVVAVAVESLAAGGCDEAVVVVKE GMHNHLQLALAASPIPVHFVTGGNTRQESVRNGLRFIAQHHRLSDATTVLIHDAVRPLVP AYVVENVIAAVENGAVAVTPVVDVVDTIRQVDGDTSSVVDRSTLRAVQTPQGFKRAIITE CHEQLSIEGGSVTDDISCCERYGHHATLVEGSRMSLKITEPVDLDIAEVFAKAAAGAGHH SGRRIGRMLRAAKPSTVVRKLGHGSRR >gi|302034478|gb|GL383157.1| GENE 454 485415 - 485861 270 148 aa, chain + ## HITS:1 COG:MT3687 KEGG:ns NR:ns ## COG: MT3687 COG0245 # Protein_GI_number: 15843194 # Func_class: I Lipid transport and metabolism # Function: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase # Organism: Mycobacterium tuberculosis CDC1551 # 3 135 24 155 159 145 61.0 3e-35 MHVAGLSFPDERVGLVGHSDGDVACHAICDALLSATGLGDIGSVFGTADPQWAGAAGADL VGHVVALIAGKGWTVQNVAVQVIGQRPRMAARRAEAETALAQTVGAPVSVSATTTDHLGF TGRGEGVAAVASALVTRGLKSEDNSLIR >gi|302034478|gb|GL383157.1| GENE 455 485808 - 486212 387 134 aa, chain - ## HITS:1 COG:PM1969 KEGG:ns NR:ns ## COG: PM1969 COG3731 # Protein_GI_number: 15603834 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system sorbitol-specific component IIA # Organism: Pasteurella multocida # 7 117 3 108 123 72 32.0 2e-13 MATTSSTLWNAVVLRIGKGAQDMLDTGVIVLFGEPVPDALSDICVVHNRGGRSPLTPQRE LLPGDVLNFAGTRYTIDEVGEAATSNLSDLGHVALYFNSPDQSLLAGAIKVSGPPPQLPD QGVILTFEPSSDKG >gi|302034478|gb|GL383157.1| GENE 456 486450 - 486692 168 80 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3397 NR:ns ## KEGG: HMPREF0675_3397 # Name: not_defined # Def: PTS system, lactose/cellobiose specific IIB subunit # Organism: P.acnes_SK137 # Pathway: Galactose metabolism [PATH:pak00052]; Phosphotransferase system (PTS) [PATH:pak02060] # 1 80 18 97 97 142 96.0 5e-33 MQVANKLQRLLRERGINARMEHCHVAEVPRVAERFSPDVIVSTTAVKQPTENVKMFRGVA FLTGVDEGQLADEIANALKS >gi|302034478|gb|GL383157.1| GENE 457 486776 - 487261 589 161 aa, chain - ## HITS:1 COG:ML0320 KEGG:ns NR:ns ## COG: ML0320 COG1329 # Protein_GI_number: 15827084 # Func_class: K Transcription # Function: Transcriptional regulators, similar to M. xanthus CarD # Organism: Mycobacterium leprae # 1 161 4 163 165 206 70.0 2e-53 MTFNVGETVVYPNHGAAVIEDIETRTIKGEEKLYLVLRILGQNDLVVRVPASNLDLVGVR DVVDDEGLENVFEVLRKTNVEEPSNWSRRYKANLEKLHSGNVLKVAEVVRDLWRRERDRG LSAGEKRMLSKARQILVSELALAKKVADDRAEEMLDEVLAS >gi|302034478|gb|GL383157.1| GENE 458 487506 - 488006 493 166 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3399 NR:ns ## KEGG: HMPREF0675_3399 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 166 21 186 186 274 99.0 1e-72 MIDRRRTTAVLAAVGVLGVVACGADPKVLTSYTPAAGVNGKSDTVKVQNLVLINGGGQAR VSAAVVSRKDDKIVGITGEPLTSNNSLSGRSFTMRTVNVKLPAQTSVNLTQSKLQVPVEG LSNGLLAKVTIKFANSAPVTLDAPVVSSTHPDFAEYAPSGIPSARS >gi|302034478|gb|GL383157.1| GENE 459 488059 - 488739 569 226 aa, chain - ## HITS:1 COG:MT0510 KEGG:ns NR:ns ## COG: MT0510 COG0745 # Protein_GI_number: 15839882 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Mycobacterium tuberculosis CDC1551 # 1 226 4 230 230 291 68.0 1e-78 MTRVLIIEDEESYREATAFMLRKEGFEVNTAANGADGLEIYSHNGADIVLLDLMMPGLPG TEVCRQLRQRGNVGIIMVTARDSEIDKVVGLELGADDYVTKPFSHRELVARIRAVTRRGG PEIEVSPDVLEESGVRMDVERHEVSVGGTAVRLALKEFDLLEVLLRNAGRVMTRASLIDR VWGADYVGDTKTLDVHIKRLRAKIEDDPSRPVRIITVRGLGYKFQA >gi|302034478|gb|GL383157.1| GENE 460 488736 - 489902 670 388 aa, chain - ## HITS:1 COG:MT0509 KEGG:ns NR:ns ## COG: MT0509 COG0642 # Protein_GI_number: 15839881 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Mycobacterium tuberculosis CDC1551 # 2 388 12 392 410 221 41.0 2e-57 MILSAIIGAVVGAGLTVLVSRVVESSRHPVDTLATDIEAIEVDSALARALDLTTEAAVIV GPHDEVLHTTLGARSMELVRGSRIADEALLKLVRTARREGRDIVDTMEMKRASTGADLIL TVRVGPLDDHGNAVISASDSSRHVRLAETRRDFVANVSHELKTPIGAVSILAEAIEGAAD DPEAVRHFSQRLTAESSRLSALVTQIIDLSRLQADEPLLRAEPVAVADAIDEAVSRHREQ AANREVSLVVRCDDDLWVLGDQSQLTEAVANLVHNAIVYSEPKARVVVSARRVRDVDTDV IAIAVADNGIGISEADQKRIFERFYRVDYSRSRENGGTGLGLSLVKHTCQAHGGSVDVWS KLGQGSTFTLRLPTLDVDHHNESNQEES >gi|302034478|gb|GL383157.1| GENE 461 490078 - 490746 677 222 aa, chain + ## HITS:1 COG:MT0843 KEGG:ns NR:ns ## COG: MT0843 COG0704 # Protein_GI_number: 15840234 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate uptake regulator # Organism: Mycobacterium tuberculosis CDC1551 # 1 213 1 213 213 170 46.0 2e-42 MRESYHDELNATSGRILTMAELVRVAVKDATAALIGADLTTAERVISDDSKVDSLNEEIE RRCFDLLARQAPVAGELRTIVAMLRMCYELARMGDLAAHVAKIARLRFPEVAVPPQVADQ FVEMSKIADSMIGKAEKTLADRDAEAAESLASEDSKMDDLRRDQFRLLLGDDWTYGVESA VDTALLGRYYERIADHAVAVGSRVIYIVTGEGPAGEDWPSAY >gi|302034478|gb|GL383157.1| GENE 462 490892 - 491962 857 356 aa, chain + ## HITS:1 COG:CAC0090 KEGG:ns NR:ns ## COG: CAC0090 COG0726 # Protein_GI_number: 15893386 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Clostridium acetobutylicum # 152 355 87 292 293 137 37.0 5e-32 MAFAFRSKTIAGAVVVVTTVSMAIAGCASSDPESASSSSKSGVSSAQSSSQPSPSKSPIA KPSISSGASAPAGLPSGPVPAGVFGVGAAVTKPACAEPPSNYSPLKVPGTVVKDIDGLEA GTNHGRAADKYVYSASVVNQWLEKPSTQPKNKKIVFVTFDDGPTTKFTGEQLDNLEKAGA RATFFMIPPQMRDVGKNMLSRSLKMGNALAIHSYSHDYKYLYHGSAANKAKHISCDWDWA MAQSRAILGSNYFSSAFRYPGGHMSWTNLSQADATLAKRGVGWIDWNAMSGDADAQRPTT VPGYLQMVKKSIKESNNPNVVVILNHDTYGKQMTAKAMPSILAWLKSQGYEFGVIA >gi|302034478|gb|GL383157.1| GENE 463 492054 - 492803 826 249 aa, chain - ## HITS:1 COG:MT0508 KEGG:ns NR:ns ## COG: MT0508 COG0588 # Protein_GI_number: 15839880 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglycerate mutase 1 # Organism: Mycobacterium tuberculosis CDC1551 # 2 234 4 234 249 330 67.0 2e-90 MTAKLILLRHGESEWNSKNLFTGWVDVDLNEKGEGEARHAADLLKQENLLPDIVHTSLLR RAIHTAYLALDGCDRHWIPVHRSWRLNERHYGALQGLNKAETKEKYGNDQFMAWRRSYDV RPPDLDRDSEFSQFHDPRYADIPASERPVAECLKDVVARMVPYFTSDIAADLKDGKTVLV AAHGNSLRALVKHLDEISDEDIAGLNIPTGIPLFYELDDNLKPVTRGGRYLDPEAAAAGA KAVANQGNK >gi|302034478|gb|GL383157.1| GENE 464 492928 - 493386 406 152 aa, chain - ## HITS:1 COG:lin0503 KEGG:ns NR:ns ## COG: lin0503 COG1762 # Protein_GI_number: 16799578 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Listeria innocua # 15 151 19 149 155 71 34.0 6e-13 MPTPRLIVADVTATSQNDLYAQVNDRLTADNMVKSTFLNAVSAREKKFPTGLDFGYVSIA IPHIDPEHVISPGLLVCRNSASTTFHAMDDPERNLDVQLSIWPLVTDPGNQIDMLEAVIT LIQDESSYRILLHGSHAEVANTLPDVLATVED >gi|302034478|gb|GL383157.1| GENE 465 493631 - 493924 330 97 aa, chain - ## HITS:1 COG:lin0507 KEGG:ns NR:ns ## COG: lin0507 COG3414 # Protein_GI_number: 16799582 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIB component # Organism: Listeria innocua # 1 96 1 96 97 59 34.0 2e-09 MVNKKVLVCCGTGIATSVQVANKLQRMLRDRGITATMKECKTANVPAQMTTFQPDAIVVT TAITPPDEEIKVYRGTPLLTGVDAEELADQIASDLKA >gi|302034478|gb|GL383157.1| GENE 466 494131 - 495123 838 330 aa, chain - ## HITS:1 COG:ECs2474 KEGG:ns NR:ns ## COG: ECs2474 COG0252 # Protein_GI_number: 15831728 # Func_class: E Amino acid transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D # Organism: Escherichia coli O157:H7 # 4 329 7 335 338 203 36.0 5e-52 MQTHVLYTGGTLGMVSTPNGLAPGADLTGWLNQLLSGTELAGTFETLSFEHLIDSANATP DDWRRIVDDLWEHRDDADSFVVLHGTDTLAYTSAALSYALTEFGKPVVVTGAQYSLGVVG TDAAPNVTGALRAATSGRLNGVAVFFGHKLLRGNRVTKLSSWAYNGFDSPAVPQLARTGA PWQWVENESTGCGWLNPGPYQRHDVLVVDLSPGISARRLRAVLDPLPEAVILRAFGVGNI PSDEPGVVDAILDVISAGTPVVVASQCMQADVQLGQYQSSHALTEGGAVSAHDMTLEALY AKLVFLLSQGLHGKELKRWIETDIAGEISV >gi|302034478|gb|GL383157.1| GENE 467 495127 - 496575 1203 482 aa, chain - ## HITS:1 COG:YPO1937 KEGG:ns NR:ns ## COG: YPO1937 COG1113 # Protein_GI_number: 16122183 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Yersinia pestis # 15 464 18 468 508 468 52.0 1e-132 MQEGDSVTPHTSTTVDKGDAGYDKALKNRHLQMIAIGGSIGTGLFLGTGGRLAQGGPGLA ISYAVCGIFAFLMVRALGEMAIRRPSSGAFVSYAREFMGEKGAYATGWFFFLDWSVTVMA DITAVALYLHYWTPLRAIPQWVLALIALGVVFTLNMLSVKMFGEAEFWFAAIKVAAIILF MIAAIWAIVTGARVGNYTAGLHNIAQHGGFFPAGLAPVFALTLGVIFAFGGTEMVGVAAG ETKDASKILPKAINSMILRIFVFYVGSIILMALVLPYTAYSSNESPFVTFFTGIGIPYAG DIIQVIVLTAALSSLNAGLYSTGRTLRSLAVAGEAPKAAAKLNRHHVPSGGIAMTAALGL LGVALNAFLPDSAFEIVMNLAGIGIAGTWAMVLLAHTRFVSAVRRGKDNRPEYRMPGAPV TNYISLAFLLIVVLSNVTSESGRWTLALFALVAIAMVAGWYAVRNSIKPDLLDNVVPSDE GM >gi|302034478|gb|GL383157.1| GENE 468 496620 - 496841 115 73 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGRRFLVAALFLRSCGSLTLILRPRQPGDETPQSSISSDGALSHAHADNSTGPLVSDPFV KILIFGAEWPLRG >gi|302034478|gb|GL383157.1| GENE 469 496951 - 498426 1568 491 aa, chain - ## HITS:1 COG:TP0329 KEGG:ns NR:ns ## COG: TP0329 COG0112 # Protein_GI_number: 15639320 # Func_class: E Amino acid transport and metabolism # Function: Glycine/serine hydroxymethyltransferase # Organism: Treponema pallidum # 21 489 24 491 574 522 56.0 1e-148 MSDPRAVDPTARDIAEKLAPAYRTMLDAIAQVEPRIAEATRAELTDQRHSLKLIASENYA SLPVLATMGTWFSDKYAEGTAGHRFYAGCQNVDTVETIAAEHACALFGAEHAYVQPHSGI DANLTAYWTILAHHIETPALSEFGARTVNDLTQVDWDTLRHRFNDQRAIGMSLDAGGHLT HGFRPNISGKMFDQRSYGTDPQTGLLDYDKVAELAREFKPLVIVAGYSAYPRRVNFAKMR EIADEVGAVLMVDMAHFAGLVAGKVFTGDENPIPHAQVVTTTTHKSLRGPRGGMVLTTKD YADDVDRGCPMVLGGPLSHVMAAKAVALAEARTQTFRDYAQRVANNAKALAEGLMKRGVK LVTDGTDNHINLLDVTTSFGLTGRQAEAALLDAGVVTNRNSIPTDPNGAWYTSGIRIGTP ALTSRGFGPDEFDQVAELIVTTLEATTPMTASTGKPGKAKYQIADGVAQKVHDAADELLG NFPLYPGLDLA >gi|302034478|gb|GL383157.1| GENE 470 498540 - 499646 915 368 aa, chain - ## HITS:1 COG:CC1496 KEGG:ns NR:ns ## COG: CC1496 COG0524 # Protein_GI_number: 16125743 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Caulobacter vibrioides # 3 368 4 368 368 407 56.0 1e-113 MTNPVTLRPADQCCYDIVSLGEVMLRLDPGERRIRTARSFDAWEGGGEYNVSRGLSRVFG KHAAVITSLVDDPVGHLVGDLITAGGVDDQFITWVPSDGVGRTVRTGLNFTERGFGVRGA VGVSDRGHSAASQLRAEDIDVDRLFGQLGVRWLHTGGIYAALSQSSAQTAKAVMAAAHAN GTVISYDLNYRPSLWKSIGGQEEAHRVNRELARLVDVMIGNEEDFTACLGFEVEGNDENL SHLDVNSYATMIDKVIEKFPNISVVATTLRQVRTASRNDWSAIAWSKDTGLVRSVERPNL EILDRVGGGDSFAAGLVAGLMETGDLQKAVELGAAHGALAMTTPGDTSMVTRCEVESLAA GGSARVKR >gi|302034478|gb|GL383157.1| GENE 471 499643 - 500290 489 215 aa, chain - ## HITS:1 COG:STM1884 KEGG:ns NR:ns ## COG: STM1884 COG0800 # Protein_GI_number: 16765226 # Func_class: G Carbohydrate transport and metabolism # Function: 2-keto-3-deoxy-6-phosphogluconate aldolase # Organism: Salmonella typhimurium LT2 # 14 207 17 211 213 149 42.0 3e-36 MSNEALNTVLSHLVIPVVVIHDAATTPAVTDGRVVGGLPVAEVTFRTDAAPAAIESMAGD GRITVGAGTVINARQVDEAVSAGASFVVSPGLSREVVDRCRHHAIPVLPGAITPTEIMAG IDMGLDTFKFFPAGTFGGAATIASLEGPFPHLRFVPTGGVKPHNLADFLSRANIPAVGGT WLTPADAVAARDCHTIANLVREAVDSAHHIVKEQS >gi|302034478|gb|GL383157.1| GENE 472 500703 - 500840 89 45 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313765535|gb|EFS36899.1| ## NR: gi|313765535|gb|EFS36899.1| hypothetical protein HMPREF9567_00251 [Propionibacterium acnes HL013PA1] hypothetical protein HMPREF9574_00911 [Propionibacterium acnes HL074PA1] hypothetical protein HMPREF9575_01158 [Propionibacterium acnes HL110PA1] hypothetical protein HMPREF9576_00942 [Propionibacterium acnes HL110PA2] hypothetical protein HMPREF9580_02273 [Propionibacterium acnes HL087PA2] hypothetical protein HMPREF9585_01123 [Propionibacterium acnes HL083PA1] hypothetical protein HMPREF9587_00207 [Propionibacterium acnes HL025PA1] hypothetical protein HMPREF9589_01961 [Propionibacterium acnes HL059PA1] hypothetical protein HMPREF9593_02435 [Propionibacterium acnes HL046PA2] hypothetical protein HMPREF9604_00448 [Propionibacterium acnes HL036PA1] hypothetical protein HMPREF9605_00502 [Propionibacterium acnes HL036PA2] hypothetical protein HMPREF9611_00890 [Propionibacterium acnes HL063PA1] hypothetical protein HMPREF9612_01223 [Propionibacterium acnes HL063PA2] hypothetical protein HMPREF9616_00623 [Propionibacterium acnes HL007PA1] hypothetical protein HMPREF9617_00534 [Propionibacterium acnes HL056PA1] hypothetical protein HMPREF9591_00180 [Propionibacterium acnes HL086PA1] hypothetical protein HMPREF9597_00917 [Propionibacterium acnes HL005PA4] hypothetical protein HMPREF9598_02429 [Propionibacterium acnes HL050PA1] hypothetical protein HMPREF9600_00503 [Propionibacterium acnes HL050PA3] hypothetical protein HMPREF9606_00415 [Propionibacterium acnes HL036PA3] hypothetical protein HMPREF9608_01428 [Propionibacterium acnes HL067PA1] hypothetical protein HMPREF9609_02039 [Propionibacterium acnes HL027PA1] hypothetical protein HMPREF9613_00775 [Propionibacterium acnes HL002PA1] hypothetical protein HMPREF9614_01050 [Propionibacterium acnes HL002PA2] hypothetical protein HMPREF9618_00430 [Propionibacterium acnes HL082PA1] hypothetical protein HMPREF9620_00459 [Propionibacterium acnes HL037PA1] hypothetical protein HMPREF9564_00831 [Propionibacterium acnes HL053PA1] hypothetical protein HMPREF9566_00894 [Propionibacterium acnes HL045PA1] hypothetical protein HMPREF9573_00248 [Propionibacterium acnes HL072PA2] hypothetical protein HMPREF9594_00328 [Propionibacterium acnes HL005PA1] hypothetical protein HMPREF9595_01146 [Propionibacterium acnes HL005PA2] hypothetical protein HMPREF9565_01165 [Propionibacterium acnes HL053PA2] hypothetical protein HMPREF9569_00487 [Propionibacterium acnes HL078PA1] hypothetical protein HMPREF9610_02408 [Propionibacterium acnes HL027PA2] hypothetical protein HMPREF9615_01317 [Propionibacterium acnes HL002PA3] hypothetical protein HMPREF9572_02073 [Propionibacterium acnes HL072PA1] hypothetical protein HMPREF9583_00425 [Propionibacterium acnes HL038PA1] hypothetical protein HMPREF9590_02047 [Propionibacterium acnes HL059PA2] hypothetical protein HMPREF9592_01440 [Propionibacterium acnes HL046PA1] hypothetical protein HMPREF9602_00839 [Propionibacterium acnes HL030PA2] hypothetical protein HMPREF9338_00814 [Propionibacterium acnes HL096PA2] hypothetical protein HMPREF9337_00584 [Propionibacterium acnes HL096PA3] hypothetical protein HMPREF9344_00818 [Propionibacterium acnes HL097PA1] hypothetical protein HMPREF9568_01318 [Propionibacterium acnes HL013PA2] hypothetical protein HMPREF9570_01455 [Propionibacterium acnes HL043PA1] hypothetical protein HMPREF9571_00359 [Propionibacterium acnes HL043PA2] hypothetical protein HMPREF9581_00818 [Propionibacterium acnes HL087PA3] hypothetical protein HMPREF9586_01095 [Propionibacterium acnes HL083PA2] hypothetical protein HMPREF9584_00206 [Propionibacterium acnes HL092PA1] hypothetical protein HMPREF9579_00901 [Propionibacterium acnes HL087PA1] hypothetical protein HMPREF9588_01433 [Propionibacterium acnes HL025PA2] hypothetical protein HMPREF9563_00202 [Propionibacterium acnes HL020PA1] hypothetical protein HMPREF9343_00489 [Propionibacterium acnes HL099PA1] # 1 45 1 45 45 83 100.0 5e-15 MTRPCVVLSVLDRYKPMSFTVEAMERLGELAELQIDPDPQFHASA >gi|302034478|gb|GL383157.1| GENE 473 500850 - 500999 82 49 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313765534|gb|EFS36898.1| ## NR: gi|313765534|gb|EFS36898.1| hypothetical protein HMPREF9567_00250 [Propionibacterium acnes HL013PA1] hypothetical protein HMPREF9574_00912 [Propionibacterium acnes HL074PA1] hypothetical protein HMPREF9575_01157 [Propionibacterium acnes HL110PA1] hypothetical protein HMPREF9576_00943 [Propionibacterium acnes HL110PA2] hypothetical protein HMPREF9580_02274 [Propionibacterium acnes HL087PA2] hypothetical protein HMPREF9585_01124 [Propionibacterium acnes HL083PA1] hypothetical protein HMPREF9589_01962 [Propionibacterium acnes HL059PA1] hypothetical protein HMPREF9593_02436 [Propionibacterium acnes HL046PA2] hypothetical protein HMPREF9604_00447 [Propionibacterium acnes HL036PA1] hypothetical protein HMPREF9605_00503 [Propionibacterium acnes HL036PA2] hypothetical protein HMPREF9611_00891 [Propionibacterium acnes HL063PA1] hypothetical protein HMPREF9612_01224 [Propionibacterium acnes HL063PA2] hypothetical protein HMPREF9616_00624 [Propionibacterium acnes HL007PA1] hypothetical protein HMPREF9617_00533 [Propionibacterium acnes HL056PA1] hypothetical protein HMPREF9591_00181 [Propionibacterium acnes HL086PA1] hypothetical protein HMPREF9597_00918 [Propionibacterium acnes HL005PA4] hypothetical protein HMPREF9598_02430 [Propionibacterium acnes HL050PA1] hypothetical protein HMPREF9600_00504 [Propionibacterium acnes HL050PA3] hypothetical protein HMPREF9606_00414 [Propionibacterium acnes HL036PA3] hypothetical protein HMPREF9608_01427 [Propionibacterium acnes HL067PA1] hypothetical protein HMPREF9609_02040 [Propionibacterium acnes HL027PA1] hypothetical protein HMPREF9613_00776 [Propionibacterium acnes HL002PA1] hypothetical protein HMPREF9614_01051 [Propionibacterium acnes HL002PA2] hypothetical protein HMPREF9618_00429 [Propionibacterium acnes HL082PA1] hypothetical protein HMPREF9620_00458 [Propionibacterium acnes HL037PA1] hypothetical protein HMPREF9564_00830 [Propionibacterium acnes HL053PA1] hypothetical protein HMPREF9566_00895 [Propionibacterium acnes HL045PA1] hypothetical protein HMPREF9573_00247 [Propionibacterium acnes HL072PA2] hypothetical protein HMPREF9594_00327 [Propionibacterium acnes HL005PA1] hypothetical protein HMPREF9595_01145 [Propionibacterium acnes HL005PA2] hypothetical protein HMPREF9596_01998 [Propionibacterium acnes HL005PA3] hypothetical protein HMPREF9565_01166 [Propionibacterium acnes HL053PA2] hypothetical protein HMPREF9569_00486 [Propionibacterium acnes HL078PA1] hypothetical protein HMPREF9610_02409 [Propionibacterium acnes HL027PA2] hypothetical protein HMPREF9615_01318 [Propionibacterium acnes HL002PA3] hypothetical protein HMPREF9572_02074 [Propionibacterium acnes HL072PA1] hypothetical protein HMPREF9583_00424 [Propionibacterium acnes HL038PA1] hypothetical protein HMPREF9590_02046 [Propionibacterium acnes HL059PA2] hypothetical protein HMPREF9592_01441 [Propionibacterium acnes HL046PA1] hypothetical protein HMPREF9602_00838 [Propionibacterium acnes HL030PA2] hypothetical protein HMPREF9338_00815 [Propionibacterium acnes HL096PA2] hypothetical protein HMPREF9337_00585 [Propionibacterium acnes HL096PA3] hypothetical protein HMPREF9344_00819 [Propionibacterium acnes HL097PA1] hypothetical protein HMPREF9568_01317 [Propionibacterium acnes HL013PA2] hypothetical protein HMPREF9570_01454 [Propionibacterium acnes HL043PA1] hypothetical protein HMPREF9571_00360 [Propionibacterium acnes HL043PA2] hypothetical protein HMPREF9581_00819 [Propionibacterium acnes HL087PA3] hypothetical protein HMPREF9586_01096 [Propionibacterium acnes HL083PA2] hypothetical protein HMPREF9584_00205 [Propionibacterium acnes HL092PA1] hypothetical protein HMPREF9579_00902 [Propionibacterium acnes HL087PA1] hypothetical protein HMPREF9588_01434 [Propionibacterium acnes HL025PA2] hypothetical protein HMPREF9563_00201 [Propionibacterium acnes HL020PA1] hypothetical protein HMPREF9343_00490 [Propionibacterium acnes HL099PA1] hypothetical protein PAZ_c03900 [Propionibacterium acnes 266] # 1 49 1 49 49 87 100.0 4e-16 MLKDAEVVVTAWETGELTDLLDYTPRLQMVIHSGARSRMLLECRTTSEG >gi|302034478|gb|GL383157.1| GENE 474 501058 - 501216 58 52 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313772917|gb|EFS38883.1| ## NR: gi|313772917|gb|EFS38883.1| hypothetical protein HMPREF9574_00913 [Propionibacterium acnes HL074PA1] hypothetical protein HMPREF9575_01156 [Propionibacterium acnes HL110PA1] hypothetical protein HMPREF9580_02275 [Propionibacterium acnes HL087PA2] hypothetical protein HMPREF9585_01125 [Propionibacterium acnes HL083PA1] hypothetical protein HMPREF9587_00205 [Propionibacterium acnes HL025PA1] hypothetical protein HMPREF9589_01963 [Propionibacterium acnes HL059PA1] hypothetical protein HMPREF9593_02437 [Propionibacterium acnes HL046PA2] hypothetical protein HMPREF9604_00446 [Propionibacterium acnes HL036PA1] hypothetical protein HMPREF9605_00504 [Propionibacterium acnes HL036PA2] hypothetical protein HMPREF9611_00892 [Propionibacterium acnes HL063PA1] hypothetical protein HMPREF9612_01225 [Propionibacterium acnes HL063PA2] hypothetical protein HMPREF9617_00532 [Propionibacterium acnes HL056PA1] hypothetical protein HMPREF9591_00182 [Propionibacterium acnes HL086PA1] hypothetical protein HMPREF9597_00919 [Propionibacterium acnes HL005PA4] hypothetical protein HMPREF9598_02431 [Propionibacterium acnes HL050PA1] hypothetical protein HMPREF9600_00505 [Propionibacterium acnes HL050PA3] hypothetical protein HMPREF9606_00413 [Propionibacterium acnes HL036PA3] hypothetical protein HMPREF9609_02041 [Propionibacterium acnes HL027PA1] hypothetical protein HMPREF9614_01052 [Propionibacterium acnes HL002PA2] hypothetical protein HMPREF9618_00428 [Propionibacterium acnes HL082PA1] hypothetical protein HMPREF9620_00457 [Propionibacterium acnes HL037PA1] hypothetical protein HMPREF9564_00829 [Propionibacterium acnes HL053PA1] hypothetical protein HMPREF9566_00896 [Propionibacterium acnes HL045PA1] hypothetical protein HMPREF9573_00246 [Propionibacterium acnes HL072PA2] hypothetical protein HMPREF9594_00326 [Propionibacterium acnes HL005PA1] hypothetical protein HMPREF9595_01144 [Propionibacterium acnes HL005PA2] hypothetical protein HMPREF9565_01167 [Propionibacterium acnes HL053PA2] hypothetical protein HMPREF9569_00485 [Propionibacterium acnes HL078PA1] hypothetical protein HMPREF9610_02410 [Propionibacterium acnes HL027PA2] hypothetical protein HMPREF9615_01319 [Propionibacterium acnes HL002PA3] hypothetical protein HMPREF9572_02075 [Propionibacterium acnes HL072PA1] hypothetical protein HMPREF9583_00423 [Propionibacterium acnes HL038PA1] hypothetical protein HMPREF9590_02045 [Propionibacterium acnes HL059PA2] hypothetical protein HMPREF9602_00837 [Propionibacterium acnes HL030PA2] hypothetical protein HMPREF9338_00816 [Propionibacterium acnes HL096PA2] hypothetical protein HMPREF9568_01316 [Propionibacterium acnes HL013PA2] hypothetical protein HMPREF9570_01453 [Propionibacterium acnes HL043PA1] hypothetical protein HMPREF9581_00820 [Propionibacterium acnes HL087PA3] hypothetical protein HMPREF9586_01097 [Propionibacterium acnes HL083PA2] hypothetical protein HMPREF9584_00204 [Propionibacterium acnes HL092PA1] hypothetical protein HMPREF9588_01435 [Propionibacterium acnes HL025PA2] hypothetical protein HMPREF9563_00200 [Propionibacterium acnes HL020PA1] hypothetical protein HMPREF9343_00491 [Propionibacterium acnes HL099PA1] # 1 52 1 52 52 94 100.0 2e-18 MIILAARRGLPITASVHREPSQGGDVLGNFTEVGLYGAQIDSLGVANFALGH >gi|302034478|gb|GL383157.1| GENE 475 501319 - 501507 151 62 aa, chain + ## HITS:1 COG:AGl3399 KEGG:ns NR:ns ## COG: AGl3399 COG0111 # Protein_GI_number: 15891817 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 62 210 271 338 73 53.0 1e-13 MRTCDVVSLHSASTPRTYHMLGAEDFATMKDGAAFINTARGAICGQDALIAELQRDRINA IM >gi|302034478|gb|GL383157.1| GENE 476 501494 - 501655 58 53 aa, chain + ## HITS:1 COG:no KEGG:PPA0379 NR:ns ## KEGG: PPA0379 # Name: not_defined # Def: putative dehydrogenase # Organism: P.acnes # Pathway: not_defined # 5 46 35 76 101 72 80.0 4e-12 MPSCDVTDPEANVPDSPLWTLPNIMLTPYAAGSVGKELRRLGDGAVTTWPATS >gi|302034478|gb|GL383157.1| GENE 477 501735 - 504215 1116 826 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3415 NR:ns ## KEGG: HMPREF0675_3415 # Name: not_defined # Def: hyaluronate lyase # Organism: P.acnes_SK137 # Pathway: not_defined # 1 826 1 826 826 1565 100.0 0 MFDIPYQVPSRRTFLSLSALSAIAIAASPEMPDAFASPDPDIWSALCEKWTDIITGRNAA KTADPRARAIIAKTDKRVATILTDLASSSSRTTVLLSANLQKEESSFITTTARAISSIAC AWATPGSAYHAEPHVLSACIDALKDFCRLRYHPSQDEYGNWWDWEDGASRAIGDVMCILH DALPTDVMAAAAAGIDHFVPDPWYQQPESVKPTAHPTQPVISTGANRMDLTRAVICRSIA TGDESKLRHAVQGLPDSWRTVAEGDGFRADGGFIQHSHVPYTGSYGDVLLSGLAMLLPLV AGTRFDITDSAQANLLSQVERGIVPVMYGGQILDCVRGRSISRIDEPAAMHGMSIARSML LMANAIPAHRAELWRGTVHGWMTRNTFDHLSEPASLRDIDLFDTAANVRPIPESSTPTYF ASIDRLVHRTPNWLIAVSNCSNRISWYEYGNSENEWASRTSQGMRYLMLPEDMGQYEDGF WATVDYSAPTGTTVDSTPLKRAVGTAWAERTPDNEWSGGLASGEWSAAASQITSQDSTLK ARRLWVGLKDALLELTTDVSTDASKATTVVEHRKVGKTPPELLVDGITITSKTSFDNPHW AHLRGVGGYVFATDVDLTAQLEKRKGSWIDVNPARTVKGFNEAIERNYASLHVTHHNRPV AWAVLPTASRSQTMALAQRPVDNLFIVLSNDRMVQAVRSTGCLLTKDPTVVTTYAFWKPA TCAGMTADAPAIIQTQAQGSRVEVIMSEPTQKRPSLTVAIEGVWTVENSSDRISVSRSDK TTTLRINTADLGGQSIRVTLSPALPKPTKPSLRASSYPLGLPHTSS >gi|302034478|gb|GL383157.1| GENE 478 504272 - 504469 96 65 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313793056|gb|EFS41123.1| ## NR: gi|313793056|gb|EFS41123.1| hypothetical protein HMPREF9575_01151 [Propionibacterium acnes HL110PA1] hypothetical protein HMPREF9612_01230 [Propionibacterium acnes HL063PA2] hypothetical protein HMPREF9598_02436 [Propionibacterium acnes HL050PA1] hypothetical protein HMPREF9566_00901 [Propionibacterium acnes HL045PA1] hypothetical protein HMPREF9594_00321 [Propionibacterium acnes HL005PA1] hypothetical protein HMPREF9610_02415 [Propionibacterium acnes HL027PA2] deoxypurine kinase subunit [Propionibacterium acnes HL097PA1] # 1 65 1 65 65 126 100.0 6e-28 MSQGRLRDRGIQESISQFAPVLAFLNSFRSCERSPTVIFEPLLDKVAKCLYRQIDTIGNR FPVIC >gi|302034478|gb|GL383157.1| GENE 479 504594 - 504866 91 90 aa, chain + ## HITS:1 COG:no KEGG:PPA0381 NR:ns ## KEGG: PPA0381 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 53 90 110 147 290 70 81.0 3e-11 MSWRRGGPTASIPNPASVGYAGLSIGRQWSRHVHLLCCFTSPNLGFGNTCPPQTLEQPVE WFQDVRSPQIPDNNWIWFQIIVETFLRGVG >gi|302034478|gb|GL383157.1| GENE 480 504973 - 505197 92 74 aa, chain + ## HITS:1 COG:no KEGG:PPA0381 NR:ns ## KEGG: PPA0381 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 56 188 243 290 84 69.0 2e-15 METLPALWTLLAPDWDVARKFADIHGPRLARYLEGAPYLVGADVGGSRGVAPLIQGVVSY IGGARARPYGQGYS >gi|302034478|gb|GL383157.1| GENE 481 505248 - 506147 390 299 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3416 NR:ns ## KEGG: HMPREF0675_3416 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 299 102 400 400 587 99.0 1e-166 MRHFLDHGVTSADILTMVWFHEFRPMAQSYSGVGSPYWAAKGMLGLALPPDHPVWTEPEE PIPVEASDIYRIIAVPGWMVSETCQDGIVRVLNIGTDGQDEGELVGEAPLYTSLGFSTAT APPQAGEWKLRSVANVVGLRDGQGQVSARSDQRVERCEYIGEVVVGQSSWLAHWVHDDVD EGAGYGARGIVEIGPKIVCAHACHRGVEVRCVWVEGALCSGVVLMAGWPTDPCDGPESYL EPVTSWSHRERLAGHRVTGLSKLTTVETLKTSLAGGGALYRIGRVRPMRASPTGECKRR >gi|302034478|gb|GL383157.1| GENE 482 506663 - 507619 691 318 aa, chain - ## HITS:1 COG:Cgl2588 KEGG:ns NR:ns ## COG: Cgl2588 COG0566 # Protein_GI_number: 19553838 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylases # Organism: Corynebacterium glutamicum # 1 317 1 312 313 277 51.0 2e-74 MAGNSQRRGGGHKSKSSAVGSGGRGRKALKGRGPTPKAEDRVYHKAYKAKQEKLARAAAR KPANRQSTGAGPEWVIGRNPVLEALHAGLPVRTAYVAEGAEHDSRLRAILTFCADHGIAL MQATRGELDRMTGGSNHQGVALRLPEYEYATVGDLIAAGTQTYRGGLVVALDKVTDPRNL GAIIRSAAAFGAQGVLIPSRRSASMTAAAWKTSAGAAARIPVAMATNLNQALGKFAAAGW MIVGLAGEADSDFASAPGFDGPLVIVVGSEGDGLARLTRQSCDVLASIPISSDVESLNAS VAASIALYEAARMRGAKL >gi|302034478|gb|GL383157.1| GENE 483 507633 - 509105 1011 490 aa, chain - ## HITS:1 COG:ML0323 KEGG:ns NR:ns ## COG: ML0323 COG0215 # Protein_GI_number: 15827087 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Cysteinyl-tRNA synthetase # Organism: Mycobacterium leprae # 17 489 7 463 473 454 50.0 1e-127 MVSDVSGYTGNLSHVTFKLYNTATHGIETFKPLREGQVSIYHCGMTVQSSPHLGHIRKEV VFDVLRRWLECSGYRVTVVANVTDIDDKILAKSAAAGTPWWAHAYHYENELHAAYKALGC RPPTYEPRATGHIPEMIELVKTLIEKGHAYPAPDGSGDVYFDVRSWPRYGELSGMRVDEM SPAEDSDPRGKRDPRDFALWKGHKEDEPETASWVSPWGRGRPGWHLECSAMSGKYLGEAF DIHGGGIDLRFPHHENELAQSAAAGRPFAHYWMHNAWVTMSGEKMSKSLGNTAQVSEVTK TYSPRAVRYFLLAPHYRSMIEFSPSDEGTKGSLDEATKAIERIDSFLDRASNLVGEQVTA SHELSEAFVIAMDDDLGTPQAVAALFSQITEGNKSVSIGDAEATRHHLSQVKAMLAVFGL DPQAPEWADTATGDARLEPVVDGLVQAMLDQRAEARARKDWTTADAIRDTLTNLGLTIED TPTGAHWSLS >gi|302034478|gb|GL383157.1| GENE 484 509112 - 509330 180 72 aa, chain + ## HITS:1 COG:no KEGG:PPA0385 NR:ns ## KEGG: PPA0385 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 72 1 72 72 85 94.0 9e-16 MAEIRKHKPSSSPIARALEAAMGESIKPVVPGSRPDKGVEEPETKLESSPSVAASPAQWG SFTVAMPPKSSD >gi|302034478|gb|GL383157.1| GENE 485 509341 - 510759 858 472 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3421 NR:ns ## KEGG: HMPREF0675_3421 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 472 1 472 472 879 100.0 0 MGGKLFLVTRFLSAKPDSRLLPLPWSTPLAQWPQERLVALPRGISRHVVRFITVDDDVYA AKEVVEHLAIHEYRLLHDLMRLDTPSVEPIGVITDRVASNGEPLEPIILTRHLRFSLPYR SLFHSGVRQGTVMRLLDALVVLLVRLHLVGFLWGDISLSNVLFRRDAEAFAAYLVDAETG ELHDHLTTGQREHDLQIARTNLYGEFLDLEEGDMLDDALDPLGLVTTIEDRYHDLWNELT AAEEFDGGDYSQVESRVRRLNALGFDVAELDIQTSPDGQRLRIQPKVVDAGHHQRRLLRL TGLDTEEFQARRLLNDLDTFRARNGLQGVDEAVAAHRWLTECFEPVVQQIPPELSRKREL AQFYHEVLDYRWYESQRQQREVPHVEAAQGYVRDILAKLPDEAISTESVVPVDGSPAHSG HELVNVYDPSLGYVEDEEEDAPYDPWEAHAEAIDVESASRLDIDALRARMKR >gi|302034478|gb|GL383157.1| GENE 486 510749 - 510961 88 70 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPPTLGLGGVPPSQRGNSDSRGATFEDRQSLHGGGHRHGPSCHRVFLEVAKPGRRKFSTN FRIRRDECSP >gi|302034478|gb|GL383157.1| GENE 487 511011 - 511529 523 172 aa, chain + ## HITS:1 COG:SA1984 KEGG:ns NR:ns ## COG: SA1984 COG1302 # Protein_GI_number: 15927762 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Staphylococcus aureus N315 # 43 151 45 149 169 77 45.0 1e-14 MTDNKTASAKSDATKTENLPETTTKETLPPSPLHTDHGSTLIAEQVVQKIAGIACREVPG VHAMGSTGRRMLSSITDRIPGSTTNVSNGVQVEKGERQCAIDLSVVIEYGYSVVEVANKL RETIIDAVEYGTGLEVVEVNVQVTDVYIQGEDDHDDDQSDQVAGQRKNTELS >gi|302034478|gb|GL383157.1| GENE 488 511541 - 511726 292 61 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3423 NR:ns ## KEGG: HMPREF0675_3423 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 61 1 61 61 73 100.0 2e-12 MNASRIGALVGLLLGVIAVCVGVWQAIVVLVLGLLGLIIGRIIDGQLDVHDIFGKPSQRN R >gi|302034478|gb|GL383157.1| GENE 489 511726 - 512139 244 137 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3424 NR:ns ## KEGG: HMPREF0675_3424 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 137 1 137 137 219 100.0 2e-56 MSAGTTRVRSVPSLAVHNREKASRGTLTVTTAVVEKVAARVAAQSEGFGAPTSSFFGSGS RADFDRGPKVSAVLTGRTADLEVEVAIGYPAPVQAQCDDLRARLTEQVPKMSGVDIRTID ILVSRVVSKAPTMKELT >gi|302034478|gb|GL383157.1| GENE 490 512141 - 512695 269 184 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3425 NR:ns ## KEGG: HMPREF0675_3425 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 184 1 184 184 320 100.0 2e-86 MSKQYVSPPLIRRPSRTLPVTILAVVLLAAGVVAIIAAIQRLQHGSLPQWVAWGRGHMTT ASWLNDTALTVAIVIGVVALLFLIWAFKPGRTSGVFLQPSEGAPDNREIVMDNSDLTGWL SRWLDEEDGVASSVVKRRGKTLKVHAETDVKDPEVMREQLTTRIAARVDSLGLEQPLKVE VRLR >gi|302034478|gb|GL383157.1| GENE 491 512692 - 513408 444 238 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3426 NR:ns ## KEGG: HMPREF0675_3426 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 238 1 238 238 436 100.0 1e-121 MKGRANRTRLAVVGIIGLVVVAWFMLVRFNVVSSWGWRQPKPDAPIVDVPKAWRTDYASW ALLIVGILVAVIGLVWLLRQFSSSNRAHTYGMSHEADHGSTVLSTDALGRAVEEQIEEFP GVSSASVRFFGARVAPEMMVQIDIDDRADVRKLVDRLESEVARDVEATLDAKLVRFGTKL RTGAHVTGMGVSHVGVTEVPNIDDSGDSLPANPMPKSTFLQEKSDRAKPRTREGKVLA >gi|302034478|gb|GL383157.1| GENE 492 513465 - 514040 196 191 aa, chain + ## HITS:1 COG:mll8140 KEGG:ns NR:ns ## COG: mll8140 COG1595 # Protein_GI_number: 13476734 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Mesorhizobium loti # 18 188 4 176 208 78 31.0 8e-15 MVSRVDGHGGDEVILADIRAAQDGDAGAYARIVKSWGGRLLRFCRNNLPATIDAEDVVQD VLLTAWQKLPGLDDRSRFRAWMYTIARNRCREVIRTAGRRATDPVSPEEVAVKIDSRQDP ARAHARDAAMMALRKSVAGLPDTQRSIWVMAQIDGLGYAEIADIEGLPLSTVRGRLARAR ATIAKEMESWR >gi|302034478|gb|GL383157.1| GENE 493 514031 - 514555 236 174 aa, chain + ## HITS:1 COG:no KEGG:PPA0393 NR:ns ## KEGG: PPA0393 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 174 1 174 174 318 99.0 4e-86 MEVKLACGADMNRVWEGATQPLTEHEAECPACQAVRIEALRADQLRDDTVAEDAQTKVVV DPLKLSSVWRSYAADLSPRHCVFDDDGGQVEVRETVLAAIVRNSLADCEDGRLNRIRFSV PHTPLRLRIDLSVARGVRIPDCAERVRHRISTAMTRELGGRPEAIDIIVEDIHV >gi|302034478|gb|GL383157.1| GENE 494 514548 - 514901 283 117 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3429 NR:ns ## KEGG: HMPREF0675_3429 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 117 1 117 117 195 100.0 4e-49 MSELKNDDVVSGTLLTGEHIIDDLAGIIVTTVRNTPGVTRLVKPWWRRIGNDDRSAIRIS EEDGLSEVKVEVTVDLTVPIVQLTQDLRHRVSTAITQSGRTPGKVDIVVSKVEPNNE >gi|302034478|gb|GL383157.1| GENE 495 514967 - 516067 1101 366 aa, chain - ## HITS:1 COG:MT2098 KEGG:ns NR:ns ## COG: MT2098 COG3839 # Protein_GI_number: 15841526 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Mycobacterium tuberculosis CDC1551 # 1 358 1 349 357 436 64.0 1e-122 MATVQYKEATRVYPGTDRAAVSKLDLDIGDGEFMVLVGPSGCGKSTSLRMLAGLEEVNAG SIWIGDRDVTDLPPKDRDIAMVFQNYALYPHMTVADNMGFALKMQNVPKAERQQRVLEAA KLLGLEDFLNRKPKALSGGQRQRVAMGRAIVRNPQVFLMDEPLSNLDAKLRVQTRTQIAA LQQRLGVTTVYVTHDQVEAMTMGDRVAVMRDGVLQQVDSPLALYDTPKNLFVAGFIGSPA MNLMEGDVVDGGVELGDYVVPVSRDVLAKVPNETKLTLGIRPEAFTLASEGIGLDVAVVE ELGADAYLYGSLVGSGKQASIEDGEAHQVVARISSRRPPQRGEQVRLGVDPASVHVFSQE TTERIS >gi|302034478|gb|GL383157.1| GENE 496 516179 - 516406 121 75 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313824245|gb|EFS61959.1| ## NR: gi|313824245|gb|EFS61959.1| conserved domain protein [Propionibacterium acnes HL036PA2] conserved domain protein [Propionibacterium acnes HL050PA1] conserved domain protein [Propionibacterium acnes HL027PA1] conserved domain protein [Propionibacterium acnes HL002PA1] conserved domain protein [Propionibacterium acnes HL037PA1] conserved domain protein [Propionibacterium acnes HL005PA2] conserved domain protein [Propionibacterium acnes HL005PA3] conserved domain protein [Propionibacterium acnes HL053PA2] # 1 75 4 78 78 153 100.0 5e-36 MDTTHKGGPGGEDAAILLVKWRIFRVRGTMNEVLPQSGTGWSSRDVRRGPPLMFFYIAAH WTVDSRLFPCEAGSA >gi|302034478|gb|GL383157.1| GENE 497 516820 - 518256 981 478 aa, chain - ## HITS:1 COG:RSp0045 KEGG:ns NR:ns ## COG: RSp0045 COG1760 # Protein_GI_number: 17548266 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Ralstonia solanacearum # 5 478 3 461 461 488 56.0 1e-137 MSVAVSVFDIFKVGIGPSSSHTVGPMRAARIFVTDLAQSPVWPEVTRVRAELFGSLGATG HGHGSEAAVLLGLEGEDPATVDTDQTPARAASIANDGRITLDAVHGGREISFDVTTDLVL HRNRSLPFHPNGMTFTAWSGQEVVVERTFYSIGGGFVVEHGEDEHPAIVRDSAPVPYPFK TGKELLEQCSDYRMSIPEVAMANEMTLRAEEEIRGQLLDIWAVMHACVERGCSRAGVLPG GLHVRRRAMKMHHDLVTRERIPPGKPEPFGSVDWLTVWALAVNEENAAGGRIVTAPTNGA AGIIPSCLHFAVKFLSPGSDIDSGTPGVDTGDDDLIVNYLLAAGAVGEIYQQSASISGAE VGCQGEVGVACSMAAAGLAQVMGGTPTQVCNAAEIGLEHHLGLTCDPVGGLVQIPCIERN ALGAIKAVTAARLAMAGDGSQIVSLDQVMKTMMETGRDMKVKYKETARGGLAVNIVEC >gi|302034478|gb|GL383157.1| GENE 498 518598 - 520907 1210 769 aa, chain + ## HITS:1 COG:SMc04129 KEGG:ns NR:ns ## COG: SMc04129 COG0673 # Protein_GI_number: 15963876 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Sinorhizobium meliloti # 446 665 73 314 433 95 29.0 3e-19 MTSQERPAGRGQRKDDVLRELRADGALTAAELVERTSLSRPTIISLLRELEEDGWVSSEV GGHGAPGRPATAWAPASRAGIVIGADVLVDSMLTVVSTFHGRVLEVRTDQLVDRCREARL DVVAGVIGEARDRWSEGFGLLRQVAVSTTGVVDGHGTVLRSDLVPQWEGLDLAAALVQRL GVSVSVENDINMAAWGEFCCRRGQSLSSDGDMLLVQMTKGLHTGLVLSGRIHRGRQWNAG EISDVLDLRLEDGQHPDDEWIDRAALTIGSVAGVVNPDLIVVAGPTSRSLDVIRQVIARL HQRRVPGSVPVPAEVAALGRAASVVGAVDVALGHASAAFLGVERPHPVALQGVERIHQEV EKGHHSVMATTRDKRTIEVLRVGVVGVGARSRLALNAELEGNGGAIVAVCEPHHLARRRV ADRLGKDPDSIVITSDVAGLIRAGIDVAFVTSPDDTHVEVTCALLEAGVPVYLEKPLAIT LESATKVLVTAHRTGTKLYVGHNMRHMNVVRSMRDLIRTGRIGEVKAIWCRHFVGAGGDF YFKDWHATREHGTGLLLQKAAHDIDVMHWFAGSHTTDVVGMEGLTLYDQITDRCDHSDEL MGDWYSLDNWPPLSQKGLNPVIDVEDLSMVLMRMESGVYASYQQCHYTPDYWRNYTVIGT EGRIENFGDGEGGVIRLWNTRTHYNAEGDETFPIIGDANGHGDADVLTVTEFLNFVRNGT RTDTSPLGAWYAVAAGIEATESLRSGSTPRMVPSLDAELVEYFNNNQVK >gi|302034478|gb|GL383157.1| GENE 499 520930 - 522222 1242 430 aa, chain + ## HITS:1 COG:lin0220 KEGG:ns NR:ns ## COG: lin0220 COG1653 # Protein_GI_number: 16799297 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Listeria innocua # 53 430 45 416 418 134 29.0 3e-31 MDRRGFIAGAALATLAVAGCSSSKKEAGSGTASIAPDTSAELVLAYWDKNQTRTIKENIK SFNKKYPNVKVTTNLAGYEDYWKKLRTQAQGNELPDVFWMNGPNIQLYAGNGMLAPIDKV TDAGVKWSDYPEALVKLYTYDGKHYGVPKDFDTIGVFYNKKIFKDAGVELPTADWTWDDF HDKAKKISDWGKSKGIYGCATTINGDGQGTYYNTIFQAGGFVIKDDKSGFDDPKSIEGLQ CWADWVKDGSVASPKVITDTKPSQMFKSGKSAMYWSGDWTASELAEEFKGHENDYDVIVL PKKDRKATVIHGLGWVVSARSANQAAALALVAHMGSKQAQETEARNGTAIPAFHGTQDPW VKAFPQWNCKMFVDAATTYAVTYPVSRNTSVWADKEADYVNPAFSGEMPVPETARKLATF MNDALAKEKG >gi|302034478|gb|GL383157.1| GENE 500 522219 - 523175 831 318 aa, chain + ## HITS:1 COG:XF2447 KEGG:ns NR:ns ## COG: XF2447 COG1175 # Protein_GI_number: 15839038 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Xylella fastidiosa 9a5c # 29 313 5 289 293 154 36.0 1e-37 MIHPGTRGDTAVAPLSSRSGHRKKKDPTSVGAWPALFIGPLMLGIAVFYYWPIFENVVAS LKQTNAFGGNPQFVGFENYRELFASPDLRSAIGNTLLYTVIVLLGIPLSVAVAAMIELPG LRFKGLYRILYFMPYLAMPMAVAQVRKIVYNGQFGLLNQILRSVGVSDPPYWLVSPGWAL FAVALFGLWASIGFNVIILSAGLKSIPRELYEAASIDGASAWRQFRMVTVPLLSPSIFFL TIMTTIGGFQLFDALYAMIGTGNPAEPRTRSLVSLFYRQAFVNHDQGLGAAVAIVIFALV AIVTLAQFLGQKRWVNYV >gi|302034478|gb|GL383157.1| GENE 501 523168 - 524058 608 296 aa, chain + ## HITS:1 COG:lin0219 KEGG:ns NR:ns ## COG: lin0219 COG0395 # Protein_GI_number: 16799296 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Listeria innocua # 34 295 20 281 282 194 38.0 2e-49 MSEVSTGSELSAVEVAALAKRGDTVSQRRFVGVHILLLLGGVLMVFPFVYQILMSLSTNM EIQSVPPKLIPDRWQFHNYTEVFTRLPFLKQFGVSVTITMLRTVVQLILCSMGGYAFARM KFGGKSVLFGFVLAILMVPGQSYLIGQYEIIRELGLLETPWGIVLPGFFSAFGVFLMRQS FMSLPAELEEAARLDGCNPWQTFWRVMVPVVKPGLFAVMITTVLWSWNDLLWPLIVTARE EPMPLSVGIATLAGQHSSEFALMMAASVMAMAPIFLLFFSMQRKVIEGLASSGLKG >gi|302034478|gb|GL383157.1| GENE 502 524412 - 525449 921 345 aa, chain + ## HITS:1 COG:DR1662 KEGG:ns NR:ns ## COG: DR1662 COG1063 # Protein_GI_number: 15806665 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Deinococcus radiodurans # 1 342 23 364 370 397 54.0 1e-110 MKALVKTRPEPGLELVEVPDPVAGPNDVIVKVMRTGICGTDVHIDKWDGWAAKTVHTPLV LGHEFCGEIVELGSEVNDLEVGQFVSGEGHYVCGRCRACLAGKRHLCRNTQGIGYAVNGA YCQYFVMPAGNVWVHHIPDLDPDVAAIFDPFGNAVHTALQFPCLAEDVLVSGAGPIGIMA ALVAQFQGARNVVVTDLSDERLELAQQLGLKNAVNVSREGLETVWDRFDMKEGFDIGLEM SGSGTALTSMIDNMTHGGRIALLGTPSTDITLDFSKIIFNMITIQGVTGRQIFETWYTMA SLIRSGLDISGIITDRYPITEFREAFDVAGSGHGGKVVMNWECLD >gi|302034478|gb|GL383157.1| GENE 503 525475 - 526671 1200 398 aa, chain + ## HITS:1 COG:VCA0886 KEGG:ns NR:ns ## COG: VCA0886 COG0156 # Protein_GI_number: 15601641 # Func_class: H Coenzyme transport and metabolism # Function: 7-keto-8-aminopelargonate synthetase and related enzymes # Organism: Vibrio cholerae # 1 398 1 395 397 483 61.0 1e-136 MYGPMKDELSAKIAALKEEGLYKAEAPLTSPQSGKITVDDGREVINLCANNYLGLADSPV LIEAAKKALDEWGFGMASVRFICGTQTLHQKLERAITEFLHPDDPDNWDTILYSSCFDAN GGLFEVLLGPDDAIISDELNHASIIDGVRLCKAQRFRYRNLDMADLEAQLQAAKDCRHIM IATDGVFSMDGFVAPLPQICDLAEKYGAMVMVDDSHAVGFVGEHGAGTPEQWGVRDRVDV LTGTLGKALGGASGGYTCSHREVVEMLRQNSRPYLFSNSLAPSIAGASLATLDLLKSSGD LLTKLRENTEYFRSEMTRRGFEIPESDHPIVPVMVGDAVKAAKMADAMLAKGIYVRAFSY PVVPKGKARIRTQMSAGLTREQLDKAIKAFEEARAEIG >gi|302034478|gb|GL383157.1| GENE 504 526688 - 527596 589 302 aa, chain - ## HITS:1 COG:MT3866 KEGG:ns NR:ns ## COG: MT3866 COG1732 # Protein_GI_number: 15843379 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) # Organism: Mycobacterium tuberculosis CDC1551 # 15 300 52 337 343 165 36.0 1e-40 MTRRTLLGTALLTGLAACSSNDPLNSDGSGSGSADLIVGSANFTESEIIAEVYAQSLETV GITIKRRMQIGARDVYVKALQDGSVNLVPEYSGNLLQFFQGASSASDEKSVMASLRKAVP AGMSVGEPSAAQDADSWCVTTEFSHTHKVTSLTDLATLDSLKVGGNPELKERPYGPKGLT KAYGVPSSIVKFTALSDSSGPLTVKALTSGTVDLVDLYTTTPAIKEQHLVVLSDPRHLIV PQNVVPLLSKKVDDKARAQLARVSKALTTDDLIGMNQRFQGDEKASAATIAKDWLAQRGL AS >gi|302034478|gb|GL383157.1| GENE 505 527633 - 528328 586 231 aa, chain - ## HITS:1 COG:MT3863 KEGG:ns NR:ns ## COG: MT3863 COG1174 # Protein_GI_number: 15843376 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport systems, permease component # Organism: Mycobacterium tuberculosis CDC1551 # 1 212 1 208 239 131 47.0 1e-30 MNHIAAALTWLTTSSHWAGSGSIGVRIGEHLWYTLLALTIAAITAIPAGLAIGHTGRGKT IAVACSGALRALPSLGLLTLLAISTTIGIENPVVPSTIVLAILAIPPLLAGSYSGVDAID DEVADGARACGMTEMQVLGRVELPLATPLLLGGLRSAALQVIATTTICSYLGMGGLGRFI LDGLAVSDYPQMLAGSIVIIVLALVVDGLLCLVTRLLTGPGVRHALALTPQ >gi|302034478|gb|GL383157.1| GENE 506 528325 - 528891 423 188 aa, chain - ## HITS:1 COG:MT3864 KEGG:ns NR:ns ## COG: MT3864 COG1174 # Protein_GI_number: 15843377 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport systems, permease component # Organism: Mycobacterium tuberculosis CDC1551 # 1 182 26 207 229 135 47.0 6e-32 MLLSLLLSVPLGWWAHRARTARRILVPGASVLYALPSLPLFVLLPLILGTKILDPINVVV ALTLYGIALLVRTATDAFDSVGRSVRRDAVAIGHSDSQVFWRVALPLAVPALVAGMRVVS ASTLSLVSVGALVGVPSLGYFFTDGYQRSFPTEIWVGIIGTLVLAIIFDLVIVCVGRLLT PWRRAATI >gi|302034478|gb|GL383157.1| GENE 507 528969 - 529805 360 278 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 237 1 239 245 143 36 2e-32 MIRFDHVSKRFDDGTVAVDNFELTVESHHLVVLLGSSGCGKTTLLRMVNRMVDPSEGRIL IDDTDVATVNPVKLRRQIGYVMQSGGLLPHRTVVDNIAAVPLLSGVSRTAARTRAMDLLE RVGLDSSLARRYPTQLSGGQRQRVGVARALAANPDILLMDEPFGAVDPVVRTELQQGLLQ IQADLAKTIVFVTHDVDEAFLLGDEVLVLRREAQVAQRGRPDDVLLHPIDDFVSSFIGGD RRNLHMERHDDHPTIVDAGGRLVGRFANQPSTTVRENS >gi|302034478|gb|GL383157.1| GENE 508 529967 - 530755 782 262 aa, chain + ## HITS:1 COG:no KEGG:PPA0408 NR:ns ## KEGG: PPA0408 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 262 5 266 266 425 100.0 1e-118 MSTAAAGEKDSFAVAATSLAVAEDELARSSTGTESSAEEEWWKAEGMPWNHKPGRSDYWC MGWIGFLGIFSLAMLPLRGWLLGLDPPILMGLTGSRTGAAATGALASVGQAPYWLWWLLL GSIMSIKLDWVYWWAGKLWGRGMIEVWAGRSERAHRRYDQAEKWARKLGWLGVLVAYVPI PLPIMPVVFVLTGASGMKVRWFIALDFVAATIWNLGYLGLGWGVGDPIVDALKYYAKIAN WVAIALIIVILAPIFVKKKQKA >gi|302034478|gb|GL383157.1| GENE 509 530780 - 531142 379 120 aa, chain + ## HITS:1 COG:BMEII0787 KEGG:ns NR:ns ## COG: BMEII0787 COG3189 # Protein_GI_number: 17989132 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Brucella melitensis # 17 118 15 116 116 93 47.0 9e-20 MTIFRAVNIRDDLKKGPAEGYRVLVDRMWPRGVKKDDARLDERRTDLAPSSQLRTWWNHD PERFDEFAGRYEVELDESGAAKTFLEECAGRDEVILLYGAGDREVNHAVVLERILTELAN >gi|302034478|gb|GL383157.1| GENE 510 531173 - 531688 476 171 aa, chain - ## HITS:1 COG:MA1614 KEGG:ns NR:ns ## COG: MA1614 COG2110 # Protein_GI_number: 20090472 # Func_class: R General function prediction only # Function: Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 # Organism: Methanosarcina acetivorans str.C2A # 4 170 29 193 195 162 51.0 2e-40 MADITILRADITTLDVDAVVNAANRQLAGGGGVDGAIHRAAGPELSQACRKLRETTLTDG LPTGQSVATTAGKMPAKWVIHTVGPVWAKTIDKSDQLASCYRTSLHVADEIDARTIAFPT ISAGVYGYPMDEATRIAVETCRQTVTKVDTIYLVAFNAEAEAGYRAALGEE >gi|302034478|gb|GL383157.1| GENE 511 531806 - 532822 844 338 aa, chain + ## HITS:1 COG:CC2016 KEGG:ns NR:ns ## COG: CC2016 COG2130 # Protein_GI_number: 16126259 # Func_class: R General function prediction only # Function: Putative NADP-dependent oxidoreductases # Organism: Caulobacter vibrioides # 7 338 2 340 341 298 48.0 1e-80 MSTTRPTTTRAVHLASRPHGAPTEDNFRIEEISLPELSDGQILVANDVMSVDPYMRGRMN DVKSYVPPFHIDRPLDGGAVGTVIESRSEDIPEGSHVSHQLGWREHAVLNAGDAHIIDTD IAPASAYLSVLGMTGLTAYAGLTRAAEMKAGDAVFVSGAAGAVGSMVGQLARLLGASRVI GSAGTDAKVARLRELGFDAAFNYHDGPSTELLGQAAPDGIDVYYDNVGGDHLEAAIDHLN IDGRVAMCGAISQYNSVEPPCAPRNLALAIGKRLTLRGFVIAKYAEEVRPEFQQRMAEWL PADEIHWDETFRDGLDAAPQAFIDMLDGANTGKMLVRL >gi|302034478|gb|GL383157.1| GENE 512 532954 - 533901 638 315 aa, chain + ## HITS:1 COG:BS_yvfR KEGG:ns NR:ns ## COG: BS_yvfR COG1131 # Protein_GI_number: 16080462 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Bacillus subtilis # 1 302 1 297 301 178 34.0 1e-44 MDKPAIEIRDLVKSFPQTGSRERLIAVDHLSMTINRGEVMAFLGPNGAGKSTTVDMLLGM TRPDSGKVSVLGSDPRTAARTGCISAVFQTGGLLPDFTVAETMKAIAAAHGQRSRVKPLI ERWELAPFAGTKVGKCSGGQRQRLRFALAMLPKPDVLILDEPTTGLDVEARRHFWQVMGE EADAGRTVIFATHYIEEADSFARRVVLVSGGQLVADGPINEVRASVSGSIVRATLTDPSG LAEGLHTFPGINDVTVRGQQLIVHTSQPDDLARYLLAHTDAHGLLISTTTLEDAFVRLTG SNDSRDDADDWEAAA >gi|302034478|gb|GL383157.1| GENE 513 533898 - 534647 647 249 aa, chain + ## HITS:1 COG:BS_yvfS KEGG:ns NR:ns ## COG: BS_yvfS COG0842 # Protein_GI_number: 16080461 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Bacillus subtilis # 5 247 8 243 245 65 22.0 1e-10 MITYALLDIRRLLRNTGGTIFTVLMPAGFYLIFGATQSYTDAAVAHGNVKATIMVSMAVY GAVLAVTTWGSHAALEQQRGWGRQLALTPMTPLKYVFSKVLAIETVALVPLAVVFATGAI TNARVDGLRWLWSFLLCWVCSMPFTLFGLAVALLVRGEAATGITSFCTVAVAFLGNMFIP LNGFMLKLSRFTPMYGPGQLTRMPLIGQQMVTMRGVIDEPVWRPVVSIIAWTIIMGIVAV LAGRRRQNR >gi|302034478|gb|GL383157.1| GENE 514 534741 - 535877 833 378 aa, chain + ## HITS:1 COG:CC1149 KEGG:ns NR:ns ## COG: CC1149 COG4585 # Protein_GI_number: 16125401 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Caulobacter vibrioides # 25 378 52 389 399 122 34.0 1e-27 MVVIVGASHPIPLRRRNRNALAAGIWLVFLAYTVVSLQSSHLPPWRIALGWVGLTIFALF YLTLFWWHVDGLELWYTKRQVRRSAIVGQVVLVVLCALLALVSPKMVASALVYPIAFAVF QMPEVALEITLAIEVVGIAVLVWTVPDLMPWAISWAISVALVTVVGVLERTACRGQLACQ AEQDVLARLEEREQVASDVHDLLGQTLTVMAMKAQLAERLIGTDPDAARAQAVELHGLTR RALAQVRELVSDMAHMGVDAQLAAARTALEAAGVECVVSDTRTDVQGGCHGEGSEFDTVR GWVLREAVTNVVRHAQAHTCCVEIDDEILVISDNGRGRGGAPEGNGLTGMRRRVEAAGGE LWIGPGERGHGTRIVVTG >gi|302034478|gb|GL383157.1| GENE 515 535882 - 536502 524 206 aa, chain + ## HITS:1 COG:DRA0010 KEGG:ns NR:ns ## COG: DRA0010 COG2197 # Protein_GI_number: 15807682 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Deinococcus radiodurans # 5 206 11 211 211 184 56.0 1e-46 MIDKTPIRLVLADDQTLVRGALAALLGMEDDLEIVGTCGRGDEVVGLVQDTYADVCLLDI EMPGLDGITVATELRDQAPWCRILIVTTFGRPGYLRRAMDAGVAGFLVKDTPAEDLAQVV RKVHAGGRAIDPALAAESLIEGHNPLSGREREILRLAESGASISLIASELCLSVGTVRNH VSSAIGKTGAANRTEAAVTARRRGWL >gi|302034478|gb|GL383157.1| GENE 516 536775 - 537272 272 165 aa, chain - ## HITS:1 COG:BH0285 KEGG:ns NR:ns ## COG: BH0285 COG0406 # Protein_GI_number: 15612848 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Bacillus halodurans # 31 164 45 172 179 60 30.0 2e-09 MGVRLTMRGRSQARQAARTVADLVPHGTPTIASDQKRAVQTARPIARVLGVQVMTDPRLR EQGLGAMEGHTADELEPLPQPTGVHPADVRWAGGESLADVAERCHSLLDDLAARHLSAIV LVTHGDTMRILLGILDGRSHRDLDWDLSLTNGSVMVRNVDLGELH >gi|302034478|gb|GL383157.1| GENE 517 537399 - 538427 543 342 aa, chain + ## HITS:1 COG:Rv2236c KEGG:ns NR:ns ## COG: Rv2236c COG1270 # Protein_GI_number: 15609373 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin biosynthesis protein CobD/CbiB # Organism: Mycobacterium tuberculosis H37Rv # 16 315 9 305 313 181 42.0 2e-45 MSITPRRHVAVGLLCRAAGLGLGIIADHIVPDPQTHHPVAVFGAAVARLEKTMYADSTRR GTLFTVTCLTPLAVIGGAVDRLTRNRPALRIATTALATWAVVGSASLAREGRAMAGHLAN GDLVAARKRLPHLCGRDPDALDAAEIARGAVESMAENASDAAVASLWWGAVAGLPGLLVH RGANTLDAMIGHHNDRYEHFGKVAAYLDDVVNWVPARFTGALAAGCASTVGGDRKTTWRV VRAEHGHHPSPNGGWCESAWAAALGVQLGGRNVYYGNRVEFRPLLGSGTRPDADKTADAA RLVTTVTTAATWCAVAGLASVAHVLFYGGLIPRGLLPHSTRR >gi|302034478|gb|GL383157.1| GENE 518 538445 - 539899 967 484 aa, chain + ## HITS:1 COG:MT0268 KEGG:ns NR:ns ## COG: MT0268 COG1492 # Protein_GI_number: 15839635 # Func_class: H Coenzyme transport and metabolism # Function: Cobyric acid synthase # Organism: Mycobacterium tuberculosis CDC1551 # 1 484 1 479 494 448 52.0 1e-126 MTGILVAGTSSDAGKSLVVTALCRVARRRGVDVVPFKAQNMSNNSMVCADGSEIGRAQYL QATAAGVTPTSAMNPVLLKPGTDRRSFVVLRGKPGGVLEAGEYTTGRRYLAEAAWAAYDE LAASHDMVICEGAGSPAEINLRRGDYTNMGLARAKNLPVVLVGDIDRGGVLASLFGTWAL LDDDDRALLAGYIVNKFRGDDAILAPGLEEITDRTGMPSFGVLPWVPGVWLDGEDALEVG RWRHEGDAVDPSSLRVAVVRFPRISNATDVDAMAGETGVDVQVTTNPDTCQAADVLVLPG SRSTVSDLEWLRRSGIADVVARRAEQGRTVVGICGGYQMLCRTILDPDGQETTPGSVVEG LGLLPVEVDFAATKTLALSHGTWRGIEVGGYEIHHGVCRSLEDAEAFLDGVHVGPVWGTM WHGAFEHDEFRRTWLADAARHAGSSWRPHSDELGYQARREAMIETLADALEAHVDVDRIL HLVR >gi|302034478|gb|GL383157.1| GENE 519 540226 - 540981 723 251 aa, chain + ## HITS:1 COG:SMc03191 KEGG:ns NR:ns ## COG: SMc03191 COG2243 # Protein_GI_number: 15966675 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-2 methylase # Organism: Sinorhizobium meliloti # 1 239 1 237 251 103 34.0 4e-22 MNDATSRTLFGVGVGPGDPELVTVKTVRILREADVILVPYTEATTDGPGRAESIITAVAP EIAGRIRRIPFSMRERSGVGEKRKASWQVSSDAVVTAFDEGARTVALATVGDPTVFSTFT YLRANVEERLPDVTVELSPGITAMQALSAASGRPLVEGKEILALVPATVGISKLGQVLDL VDSVAIYKGGRKLPDVVEQLRSRDRQAVIGTDVTLESEQIITLDEVADAQTLPYFSTVLT TPERTTTGGKL >gi|302034478|gb|GL383157.1| GENE 520 540978 - 541949 762 323 aa, chain + ## HITS:1 COG:MJ1578 KEGG:ns NR:ns ## COG: MJ1578 COG2875 # Protein_GI_number: 15669774 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-4 methylase # Organism: Methanococcus jannaschii # 42 293 6 255 259 215 43.0 1e-55 MSEPQAARPTQHVSEKALEDLDHNVIEPPPVPRRDIPEGAGKVVFVGAGPGAPDLVSVRG ARVIETADIIIWASSLVHPDMVARHKEGAELIDSASIPLEDLEPLYTRARDEGLMVARVH TGDPSIYGATAEQRDLCRRIGIDFETIPGISAFSAAAARMDVEITVPEVSQSLILTRLEG GRTPMPDGETVASFARHGATMAIYLSAARNKALQEALLEGGYLPETPCIIGYAVTWPEEM MFRCDLAHLSETMRNHKLWKHAVVLVGPALAEGPISTRSHLYHPGFRHEYRAADAQAHAD LKAHGTCGVYHRNSTNPDTKGNS >gi|302034478|gb|GL383157.1| GENE 521 541946 - 544510 2082 854 aa, chain + ## HITS:1 COG:FN0951 KEGG:ns NR:ns ## COG: FN0951 COG1010 # Protein_GI_number: 19704286 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-3B methylase # Organism: Fusobacterium nucleatum # 563 806 3 241 249 196 41.0 2e-49 MIRVHGYLGTISDALREEVTQADLVVGGQRHLDALAVPDDKRQKLGLIGPAIERIQSLPD DANVVVIASGDPLFFGVVRRIRQAGLRVEVVTAPTSLQAAFAAVALPWDDAQFVSSHSKD IETAVRLAKIHPKVGVLTAPNRGLAELVDGLAGRGKTFVLAEKIGEEGQRVRVLDEDAAK AVIADEDILSPNVVLVLEHHPDSPEALGVNPELAGDVNVNGPDAPQPGSDTNPDGSDRDP IIGQIINSDAAVAHAEAIDHALKRETKKYVGPSRTGLAAAWGECDLIISHLALGATTRII APLLESKKTDPGVVVVDEAGRFAIPLVGGHVGGANELSRTVAEALSGTAVVSTATDSLGV PALDQLGWAYEGDVAGVTGSIIAGRPVLVVREQPWPLPPLPKNVTEDAETPAARVIVSER VAERVFADHGDDLPTVVLHPSCLVVGMGCNKGTEVESLRQLLVKTLEDNGLALGSVTRLV SHEVKAGELGLVKLANQLGVEYRTESAEALAAHDVPTPSDVVAREVGTPSVSEAAVLCQG AELLVHKTKTSDATCAIGRIPAHGHLSVVGLGPGSRDLLTPRAVEAIRNATFVAGYAPYV RQIRDLVRPGATILATKMGTEEERTQAAIEATRDGRNVAFVCGGDPAIYAMASPTLEMGT DGIDVEIVPGVTAELAISAILGAPLGHDHATISLSDLHTDWDLILKRVKAAAEGDLVTTF YNPRSRTRTHQLPDALAIMAEHRPPSTPVALVSHAERRQQQVIMSTLEEFKPEWCGMTTL VVVGSTTTKYVSSGDGRRLMVTPRDYHWMDGHVCSEARKNYTHKDLPRADEETYLSKPPV HSTRMSKPINDTKD >gi|302034478|gb|GL383157.1| GENE 522 544513 - 545781 1032 422 aa, chain + ## HITS:1 COG:BH1496 KEGG:ns NR:ns ## COG: BH1496 COG2138 # Protein_GI_number: 15614059 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus halodurans # 11 267 4 255 279 100 27.0 5e-21 MTDPLASGTPLVIAAHGTRDEAGVAECRALAERVARKLPGIPVELGFVELAEPGIPEAVR AAVAQAPDNPEGADGDEEAAAVVVPLMFNTGGHVREDIPEAIDEGRGDARVMYSAPLLPD VRMRKALNHRLTETLAAGEGREEWRPRDTSAVLVGRGALVPDANASHYTLTRMFWEENDL SRVEPAFIQVTRPSVPEALSALAAQGADQIVVQGNFLFPGLLHVWMTEQVEAWQASHPGV EIRIAPVIGDCDEVADVVVDRYREPLDEVGLGEGAPVYMSGLRLQGRKVLVVGAGHVAER RVVRLLEAGADVHVVAPNSGIQLTRMFRKGLVNLERRAFQTKDLDGVWFVQALTNDPEVN ALVAEEADRRGIFCVRGDNSRKGSAFTPATQQAGGMTVSVVGDRTPRRSARLRDEVLRAL QG >gi|302034478|gb|GL383157.1| GENE 523 545823 - 546689 550 288 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3457 NR:ns ## KEGG: HMPREF0675_3457 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 288 1 288 288 533 100.0 1e-150 MTGASGGAYHRRVISHDLHALGFDAPDLDALVNSAAEAGAVGVEDVGGFDLLAAYTDPSG ARLALMKQKGHDEMETMASLVAPTTHPADLVRFSPAVALVDIYSHAGFASMLTGESVLTL PTTNRRHVARFLANVDDPVEVPLCAEPGDDTPRFVEHLRVGTVANQMLRVFESEEEYGRS HEGSLGSELQFAAGTLISPWLMEINAGRATRGEASAVAEMTMVCKKVEKRTNVLTGVDWY RIVGDTSIPMTLAVSANLPRVPHVGSVVTGQVVPVVSTGTWEGDALWG >gi|302034478|gb|GL383157.1| GENE 524 546734 - 546946 76 70 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTGWSCLQCGNVTLQLTLQILQCQLHCELKCSFLGCGVGFFDVDRGGRFPVAGSGTPSRA SMFHVECRQL >gi|302034478|gb|GL383157.1| GENE 525 547607 - 548671 730 354 aa, chain + ## HITS:1 COG:Cgl1588 KEGG:ns NR:ns ## COG: Cgl1588 COG0609 # Protein_GI_number: 19552838 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Corynebacterium glutamicum # 21 345 28 354 358 208 43.0 1e-53 MPSSRRSVERDRRLPVAPLLLVLVVLIVVSAVISLAIGSEPLPLRGVLDTVGARVTGQPG PDPTIDVIVWDLRAPRALLAVIVGAGLALAGSGMQTLVRNPLADPYLLGVSAGASVGATA VIALGMFTSWGTHRLTLGALVGALAAAALVYLISMAQGGMTPLRLVLSGVVLSSAFSALA SFLVFRSPDPRAAQSVLFWMLGSVAGATWDSLWVAALVTVVIAVLMIAFSGWLDALAAGT DVARSLGIPDTRVRKALFVGNSVLVGVLVAVSGGIGFVGLVIPHMARLLVGASHRSMLPI AAAVGSLFLLWVDVGARVIAAPQEVPLGVVTGFIGAPIFLYLMGRSQYRFSSES >gi|302034478|gb|GL383157.1| GENE 526 548668 - 549459 209 263 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 4 222 2 225 245 85 26 5e-15 MTCLDVRNVQCRIGDRVIVDDVSFTAEAGQLTAIVGVNGVGKSTLLRSIAGVRKVNAGDV LLDGKSVNQYTPMQRARLMAFVGQEESPSPDLLLGEMVALGRTPHRKPWQVGQRSERAII RDALALVGLDHLIDRRCDHLSGGERRRAVIARGLAQGADLILLDEPTNHLDVRHQLQLLE TLRASGRTVVATIHDLSMAASHFDRVVVLADGGVLATGPAEEALSPSNVATAFHVIAHHV TTPEGSRELVCTAALPEPSRKEI >gi|302034478|gb|GL383157.1| GENE 527 549461 - 550531 900 356 aa, chain + ## HITS:1 COG:PA2913 KEGG:ns NR:ns ## COG: PA2913 COG0614 # Protein_GI_number: 15598109 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Pseudomonas aeruginosa # 38 339 28 320 323 162 32.0 9e-40 MSIPRLPIAVVACLAMALAGCSSGSTSKGDDAKSSSEVTLTNCGNKVTYPKVAQRLYVND GNIIAMALSAGAAKQIAAVSSLGDDKTILAAKYGSHVIDNLHEAVKGYPTLESIIANKPD VVVAGWNYGFSEEGNLTPDKLHERGIDSYLLSESCRQKGSEKARGVMQPWDAVRTDLSNL AKLTGNEPTGKKAVKDLDDRLDALNKAPKAAKTPVVLLFDSAKDTVLTSGNKGGPQAIIN AAGGQNAAHDVNDTWVRISWEKVATLKPDAIAFVDYDAQPYSEKVKILQSNPATKNLAAV QKKRFLNLPYAMWTSGPLNIDAAEHLRVSLEKWGLEPKSSIKPQLTIPASVPGHEG >gi|302034478|gb|GL383157.1| GENE 528 550621 - 551847 490 408 aa, chain - ## HITS:1 COG:MT0627 KEGG:ns NR:ns ## COG: MT0627 COG1373 # Protein_GI_number: 15840000 # Func_class: R General function prediction only # Function: Predicted ATPase (AAA+ superfamily) # Organism: Mycobacterium tuberculosis CDC1551 # 1 407 1 410 411 258 39.0 1e-68 MQLLQRNITAWVQELLDISPIVVIEGARQVGKSTLTGMIDNANTTFTTMDDDLTRTFAHD DPAGFLSSAKEGRLVIDEIQRCPELILPLKAVVDNDRRPGRFVLTGSANLLRLPGAQDSL AGRAMTARLHPFSQGELEGHKEDWVSWLLSPDRRKAQEADRSNVITRLTVGGYPLVQSMS PRVRTAWLKDYANRLVQRDASDMAQTRIPILGQLLQLLAAAPGAELVQDRLAQKLKVTRG TVVRYSDLLESLFLIHRLPAWSLNLTKRQIQRPKVFLTDTGLNAALSNMDAAHLSSMQGA DHLGPLLEQFVVCELLRQQGWSATPFKLFHYRDRQGAEVDIIVETPTGIIAVEVKSAVAA TARHFQHFKALRDRLGDEFLAGIVLTTGTGQKAGDRLESLPISSLWSR >gi|302034478|gb|GL383157.1| GENE 529 551940 - 552593 581 217 aa, chain - ## HITS:1 COG:mlr1379 KEGG:ns NR:ns ## COG: mlr1379 COG2082 # Protein_GI_number: 13471413 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin isomerase # Organism: Mesorhizobium loti # 2 207 3 206 210 189 49.0 3e-48 MAHEYVNNGSDIYRESFRIIRSEANLDRFPTDVEGVVVRMIHAAADPAIADDIAFTPAVV TAARRALGDGAPILCDSSMTATGIIRSRLPRDNETICYIKDPRLADIAQAKDMTKTCAAV DLWTEEGKLDGAIVAIGNAPTALFRVLEVCEETGARPAAVVGIPVGFVGAAESKQALVDS KLGLEYLTLLGRRGGSAIAVAAVNAIASTDELTNSHR >gi|302034478|gb|GL383157.1| GENE 530 552899 - 553582 842 227 aa, chain + ## HITS:1 COG:MTH130 KEGG:ns NR:ns ## COG: MTH130 COG0310 # Protein_GI_number: 15678158 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Co2+ transport system, permease component # Organism: Methanothermobacter thermautotrophicus # 1 218 1 215 222 189 49.0 3e-48 MHIAEGVLSPAQCAVWYAAAAPFVVHGGYRVVKEVKEHPENKLLLATAGAFTFVLSAIKL PSVTGSSSHPTGTGVGAALFKPPVMAFLGMIVLIFQALLLAHGGISTLGANTFSMAIAGP WAGYAFYKLTKKLRGPDALAIFLCMVFSDFITYVVTSFQLAFAFPDATGGFWGAVGKFLG IFAITQVPLALIEGLVGILLFRFLAKVAAPQLKQLGVLDDNPEVAHA >gi|302034478|gb|GL383157.1| GENE 531 553575 - 554009 505 144 aa, chain + ## HITS:1 COG:alr3944 KEGG:ns NR:ns ## COG: alr3944 COG1930 # Protein_GI_number: 17231436 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, periplasmic component # Organism: Nostoc sp. PCC 7120 # 52 117 33 100 100 63 51.0 8e-11 MPENTVAKAHRDSSLTSKSKWVTPVIIVLVVGLFIISMVLGAKKTSGGEEGFGGTDDAAA EAAEKAGAKKWIKPIFEPNSSEVESGLFALQAALGAGIVGYALGRMSGRTKGREEAERAS DLNSVDDVPQAAVTSSEDTSTSKS >gi|302034478|gb|GL383157.1| GENE 532 554006 - 554851 579 281 aa, chain + ## HITS:1 COG:MJ1089 KEGG:ns NR:ns ## COG: MJ1089 COG0619 # Protein_GI_number: 15669277 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Methanococcus jannaschii # 6 275 9 257 268 73 25.0 4e-13 MTITSLDDAAWDSPWRRRPVGEKVALSTALLLTALCTPSMEASRWVRSVVGSGIWPGALL AGIVSVIVVLGPARIAGRVLWQAVVAPLVFLVIGGISVLVSLGSTPVGTVWWHAGAFSIG PVSSAQAMSLIEHGVCGTLALMVLAVTTPMVDLLTWLRKFHIPDPLLEIASLTYRLIFVL LDTVVTASEAQHARLGDTPAGRFGGFNRRMNNTAALLGSVGIRAWARANRLNDGLVNRGF EAALATLPIKRTGSVRYKIIVVIVIAVLWVISWTTTGRIFR >gi|302034478|gb|GL383157.1| GENE 533 554848 - 555684 636 278 aa, chain + ## HITS:1 COG:MJ1088 KEGG:ns NR:ns ## COG: MJ1088 COG1122 # Protein_GI_number: 15669276 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, ATPase component # Organism: Methanococcus jannaschii # 6 256 3 254 279 200 40.0 3e-51 MSAKVLLSTEHLYATHPGRPMVLTDVNVSFRAGVRVAILGANGSGKTTLMRCLSGSLKPA KGHVKRGDIVVSYGRAQLREHRRAVQLVLQDPDDQLFSADVSQDVSFGPMNMGLKVDEVR DRVSESLELLGASHLAERATYQLSYGERKRVAVAGAVAMRPDLLLLDEPTAGLDPVGVTQ MLEALDRLRDHGTTVAMTTHDVDLALAWAQEALVVVDGQVHQGPIGELLADADTVGRAHL HLPWPLELARRLGVRDLPRTMDDVVAMLSDNPSPAPSN >gi|302034478|gb|GL383157.1| GENE 534 555746 - 556426 518 226 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3469 NR:ns ## KEGG: HMPREF0675_3469 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 226 4 229 229 353 99.0 2e-96 MNRSSSSAALLVGAVAVPIAVCAVLSALIDVFVPPAAALVLVLVIVIVCLRGSWLVDALV IVVSAIGFDFFLTYPYRSMKIASRPDIEVTIVLFVVGAAIAGISRWALTASDLAERRQGY VTYALDARSGDMSRDEVAQRLAGLVGAEAGAWVDGAPPSGEAVIQDATAMRTDVGLEDPS RVGFPTDRFICFPAAGGYIRISAASRHVRPTAEQMRAACLLASQIS >gi|302034478|gb|GL383157.1| GENE 535 556453 - 557049 532 198 aa, chain - ## HITS:1 COG:all3722_2 KEGG:ns NR:ns ## COG: all3722_2 COG2242 # Protein_GI_number: 17231214 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-6B methylase 2 # Organism: Nostoc sp. PCC 7120 # 4 192 5 192 197 142 42.0 6e-34 MTHDPDTSLLGRTPGLAEEHFAHDGLITKHAVRAVALAALRPMPGQLLWDLGTGAGSIAV EWCRTDPTCRAIGLERKAERAANARTNASELTLPGQFDVIDADLAKGLPEGLPDPDAVFI GGGATKALVNQCRPRLPIGGRLVVHGVTMEAEMLVETLHCDLGGDLIRFGVETADVIGRL HGWKPARTVVAWTWQRTE >gi|302034478|gb|GL383157.1| GENE 536 557277 - 557891 424 204 aa, chain + ## HITS:1 COG:MT2915 KEGG:ns NR:ns ## COG: MT2915 COG2109 # Protein_GI_number: 15842390 # Func_class: H Coenzyme transport and metabolism # Function: ATP:corrinoid adenosyltransferase # Organism: Mycobacterium tuberculosis CDC1551 # 1 204 1 207 207 233 60.0 1e-61 MPHARTSAEPDDGLSTRQRRLRPVLVVNTGEGKGKTTAAMGTALRAWHQGWRVGVFQFVK SGRWHVGEEDALRALGQLHEEIGVGGPVTWEVMGTGWSWTRSFDAAENPEAAAREGWRHV SDLLAHEALDFYLLDEFTYPMDWGWLDVDEVVETLVNRPGTQHVVITGRRAPDALVEVAD IVTEMTKIKHPFDVGQRGQAGIEW >gi|302034478|gb|GL383157.1| GENE 537 557891 - 560314 1440 807 aa, chain + ## HITS:1 COG:MT2914 KEGG:ns NR:ns ## COG: MT2914 COG1797 # Protein_GI_number: 15842389 # Func_class: H Coenzyme transport and metabolism # Function: Cobyrinic acid a,c-diamide synthase # Organism: Mycobacterium tuberculosis CDC1551 # 1 453 1 448 457 307 45.0 5e-83 MRLPRILIAAPASGGGKTTVATGLMAALRASGRTVAPFKVGPDYIDPGYHSMASGRPGRN LDSVMCGDELMAPLLAHGFVTPDPADIAVIEGVMGLFDGQLGTGRGSSAEIATTTRTPVV VVVDTAHASLTHAAVVAGLATFDPDVTVAGAILNRVASPRHGAEVARGLAQLGIPVLGQI PRTESIFVPSRHLGLVPAGEWEDSATKVAGLGGLIAEYVDLDAVMDMAATAPDLDVEPWD PAAALESAGWQGHPFGESPLVGMFAGRAFTFRYPETTEMLIAAGFRGVDVDPLTDRRLPD GIQGLYLGGGFPQMHATDLETNSELADDVRSHAEAGMPIVAECAGLLYLCRHLDGHEMAG VLPMDAAMAKRLTMGYRVATRDSISVVGHEFHRTTTTPLADLDPAWHITMPDGTDRAEGA LGDPAGLGRPTIQASYLHLHWAGQPTQAAWFASEVTKFHEGRGDQVVEPDLNHHGDRDIA DGLVDLAVNVRVNEPPQWLRDAIISTEHDWARYPDATPGREALAAMHGVPTDMVLPTAGA AEAFPLVATLEPRHAIVVHPQFTEPEAALRAAGISVGRHILNVSDGFALDPDLVPDDADL VVVGNPTNPTGRLHPATDLLALRRPGRVLVVDEAFMDATDESQSLIGSDMDDLLVLRSLT KTYGLAGIRAGYVVGDSQLVAQLAAHQTPWSVSTPAIAAMIACTCEEARRFRTQLRDDIP AARADLVDKLKGLGLSVVDSEAPFVLVNTSSLSGDSIRQPLAERGFAVRRGETFPGLGPT WIRLAVRDSNIHAELARAISDLTAHRN >gi|302034478|gb|GL383157.1| GENE 538 560324 - 561100 750 258 aa, chain + ## HITS:1 COG:Cgl1952 KEGG:ns NR:ns ## COG: Cgl1952 COG0007 # Protein_GI_number: 19553202 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III methylase # Organism: Corynebacterium glutamicum # 12 245 14 250 250 207 50.0 1e-53 MIYSADLVPGTVTLVGGGPGDPGLLTVAGFEAVRQADVILYDRLAPTAIMDENPQAERIP VGKVPRGPYVPQERTNELLIEHAKAGRKVVRLKGGDSFVFGRGGEEWQACAAAGVPVRII PGVTSCVAGPELMGVPLTHRHMVQGFTVVSGHVAPGDTRSELDWAQIAKTGTTLVILMGV AHIGDIATRLMDGGLAGDTPVAIIADASLPTQRSLTTTLEKAAEDMAEAEINPPAITVVG DVAGLDLDGTQAHVPSDH >gi|302034478|gb|GL383157.1| GENE 539 561120 - 562097 432 325 aa, chain - ## HITS:1 COG:all1780 KEGG:ns NR:ns ## COG: all1780 COG2099 # Protein_GI_number: 17229272 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-6x reductase # Organism: Nostoc sp. PCC 7120 # 76 314 1 240 245 143 39.0 5e-34 MLHRRGRRRIPRACVLAGLGAARVRRSGPTPVGVSERGSGLTSPKRRHSGGTVPDSHRCS TAIEAHCSTGWFDGLMDVLILGGTTKARQLATRLIDEGVDLCSSLAGRTKSPRPVPGPTR VGGFGGIDGLKEFLTDNEVKVMVDASHPFAAAMHGHAAQACRDLNLPLARLAPPSWRTQP EAATWHWVDDHDGATQVLADLPDVILLTVGRQPVSHYLRLGPRRVIVRCVDAPEEELPAG WKVLRERGPFTLDREREIFSQGVATLVSKDSGGTGLDPKLRLAAETDVQVVMVSRGPAPG WGDELSTVDDAVQWTGNHIATVIEQ >gi|302034478|gb|GL383157.1| GENE 540 562099 - 563766 1189 555 aa, chain + ## HITS:1 COG:CAC1372 KEGG:ns NR:ns ## COG: CAC1372 COG2038 # Protein_GI_number: 15894651 # Func_class: H Coenzyme transport and metabolism # Function: NaMN:DMB phosphoribosyltransferase # Organism: Clostridium acetobutylicum # 18 356 7 345 352 249 41.0 1e-65 MARLPESLSAESLLARTVRGIRGADAKALEAARARQQLLTKPEGSLGLLEDLSIRLAGMY GQVPVTVPSHPVVGLFAGDHGVWAQGVSPDPQEITTQQMINMAAGGAAISVLSRQMGAQL WITDVGARHEVDAPIRQRCVRRGTDDISQGPAMSLDEAVEALEVGIETGVAAVEQGADIL ITGEMGIANTTPASALISVFTGLPPAEVTGRGAGSDDRRHQHKIGVVARALQVNRPEAKH PIEALAKVGGFEHAAMAGFILAAASSRIPVLIDGVIACSAALTATAICPEARDFIITSHA GAEPGITASTSALGLPALLDLGMRLGEGSGAILTLPIVQASAHILNEMATFEDAEVIDIK VSGETEIPDTVQTSVPPCRMLVIGGARSGKSTFAESRLPRDSRVTYVATSQRNPGDAEWE ERIRLHQARRPATWQTVETTDIASVLLADDDSPVLVECLGVWITRILDEVGAWAAAPGDE AWQNDLRRHVNDLASAIRGTRRDVIFVSNEVGMGVVPDTPAGRLFRDELGRLNAAVGEAC DEVWMCVAGIPKRWA >gi|302034478|gb|GL383157.1| GENE 541 563763 - 564602 410 279 aa, chain + ## HITS:1 COG:STM2017 KEGG:ns NR:ns ## COG: STM2017 COG0368 # Protein_GI_number: 16765347 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin-5-phosphate synthase # Organism: Salmonella typhimurium LT2 # 28 267 17 242 247 72 32.0 9e-13 MTDEQHPDLGRLGPLRGVAEALSLFTILPGPYLNDIDRPLARRAITAFPWLGLCLGVVAG GIVALVLGLGAGPWLAGVLALGWLAGATGGFHLDGVADTADGLGSRAAPEKALMIMKKSD IGPMGVMSIVLLLLVDAAAVVSLAGTAGSGAWWRVAILVGLGPALARAAILLATMTEVPC ARPGGFGSLVAGVTTPRSAAINLTVLGCVCALAGLVAGGWMWCLVTVSCAALTLLIARGW IHHLVRRLSGMTGDTFGSINEVTQMTFWVLTALTVAVVS >gi|302034478|gb|GL383157.1| GENE 542 564599 - 565363 357 254 aa, chain + ## HITS:1 COG:RSc0283 KEGG:ns NR:ns ## COG: RSc0283 COG0614 # Protein_GI_number: 17545002 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Ralstonia solanacearum # 3 250 5 274 281 81 30.0 1e-15 MIDDLGVKASVARPVQRVVSLVPSITEAIAMTCPHVLVGCTDYCIRPTHLEEIVGHEVVR VRGTKNPDRKAIIDLRPDLVVANQEENREHDVTLLREAGVAVWVTRIDTVEEAISSLTRL FEEGFGVRCPQWLEEAGREWREPCRGEVLSAVTAVWRDPWICVGKDTYISDVLRRVGIEL VDLPGESRYPHVELTDIAAAHPDRVILPDEPYHFGPDDVSAFPGLDVRLVDGQKLAWYGP SMVGARRYLASALR >gi|302034478|gb|GL383157.1| GENE 543 565585 - 567222 1116 545 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3479 NR:ns ## KEGG: HMPREF0675_3479 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 545 1 545 545 1100 100.0 0 MKSHKLLTFAVAAIMATSGLSTMIPTQSALASGPSQGAQSQHVGPMTCVPFSGRPGSSGQ LPLGVIPPNWGTDGWQRMDSTSRSDLPSKIVMRDNTEGFNQRMDFALRDGKVYGRFQSEN QWRHIDTPSCLDGHISAISVNDAMLAAVDSNGWVYSLNNLLSSPKDWGWFRAWGSPFWFG RGLKLDNHDQGWWALSLIDNQTDRTYRGVDGHDHPISLAMCTEIMMVSKDGAHIYQHDPW LPNDYSFEASTPYNSRFRVHSMSASGSVALITNDHGDMFTRLWDYDIAGTDPAQFRYTWQ DQSNLPSPSTWLQGKVDPRYAAIKLPPAGWKHQPKIPGEITDRLTVVSTAPGSQNRELRV EGRREGHTGYWSKMIDAKAWKFVPTGQNLKGKPLDNPQRDTSKVDLGSASGLNYSGNLQG KANINIKDFAYQSTTRTIELTVGEKKYPVKLHSIDGRLKTTLSMLSHRERGLTSTPRYYD AAIEVPDSYLKDPDFSPFMKGYLKGEKVHELYLEVTKDSFKVINDRHPEIALRNGRNVST LDRAK >gi|302034478|gb|GL383157.1| GENE 544 567425 - 567631 111 68 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313765457|gb|EFS36821.1| ## NR: gi|313765457|gb|EFS36821.1| hypothetical protein HMPREF9567_00172 [Propionibacterium acnes HL013PA1] hypothetical protein HMPREF9575_01077 [Propionibacterium acnes HL110PA1] hypothetical protein HMPREF9576_01022 [Propionibacterium acnes HL110PA2] hypothetical protein HMPREF9589_02037 [Propionibacterium acnes HL059PA1] hypothetical protein HMPREF9593_02513 [Propionibacterium acnes HL046PA2] hypothetical protein HMPREF9604_00374 [Propionibacterium acnes HL036PA1] hypothetical protein HMPREF9612_01303 [Propionibacterium acnes HL063PA2] hypothetical protein HMPREF9597_00991 [Propionibacterium acnes HL005PA4] hypothetical protein HMPREF9598_02508 [Propionibacterium acnes HL050PA1] hypothetical protein HMPREF9600_00579 [Propionibacterium acnes HL050PA3] hypothetical protein HMPREF9606_00339 [Propionibacterium acnes HL036PA3] hypothetical protein HMPREF9608_01350 [Propionibacterium acnes HL067PA1] hypothetical protein HMPREF9609_02118 [Propionibacterium acnes HL027PA1] hypothetical protein HMPREF9613_00851 [Propionibacterium acnes HL002PA1] hypothetical protein HMPREF9614_01128 [Propionibacterium acnes HL002PA2] hypothetical protein HMPREF9618_00351 [Propionibacterium acnes HL082PA1] hypothetical protein HMPREF9620_00381 [Propionibacterium acnes HL037PA1] hypothetical protein HMPREF9565_01244 [Propionibacterium acnes HL053PA2] hypothetical protein HMPREF9615_01396 [Propionibacterium acnes HL002PA3] hypothetical protein HMPREF9590_01973 [Propionibacterium acnes HL059PA2] hypothetical protein HMPREF9592_01519 [Propionibacterium acnes HL046PA1] hypothetical protein HMPREF9602_00760 [Propionibacterium acnes HL030PA2] hypothetical protein HMPREF9344_00894 [Propionibacterium acnes HL097PA1] hypothetical protein HMPREF9568_01240 [Propionibacterium acnes HL013PA2] hypothetical protein HMPREF9581_00892 [Propionibacterium acnes HL087PA3] hypothetical protein HMPREF9586_01173 [Propionibacterium acnes HL083PA2] hypothetical protein HMPREF9584_00131 [Propionibacterium acnes HL092PA1] hypothetical protein HMPREF9579_00978 [Propionibacterium acnes HL087PA1] hypothetical protein HMPREF9588_01511 [Propionibacterium acnes HL025PA2] # 1 68 1 68 68 110 100.0 5e-23 MDIDVATADGAGMAVAMSGTRVAASIRGRFVMSIAGVSLVTKQTKCVQPFCCRLCQRLAL NRTSFDVS >gi|302034478|gb|GL383157.1| GENE 545 567653 - 567841 58 62 aa, chain + ## HITS:1 COG:no KEGG:PPA0445 NR:ns ## KEGG: PPA0445 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 62 1 62 62 120 98.0 2e-26 MVDAAIDDSWCLKMSVLITVPSLDKGFGCRWLLAETLPRKWLIYRVPHGFTGDPRRMALS LE >gi|302034478|gb|GL383157.1| GENE 546 567879 - 569468 1199 529 aa, chain - ## HITS:1 COG:Cgl2977 KEGG:ns NR:ns ## COG: Cgl2977 COG3037 # Protein_GI_number: 19554227 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 5 475 4 478 513 563 71.0 1e-160 MNIALAIVQFLVNEILSVPAFLIGIITAVGLAAMRKSIGQIAGAAIKATLGFLLIGAGAG LVVNSLGPLGKMIEGALGAQGVVPTNEAIAGIAQQQFGSQVAWIMLAGFLISLVLARITP LHYVFLTGHHMLFMATLITIVMASTSMPTSIVIGLGSLLLGVLMVSLPALAHPFTRKITG GEDIAIGHFGTSAYIAAAATGRLVDPHGKSQSTENIKVPEGLRFLRDSMVATALSMVLMY VVVAIVFLARRGEKAAFQTFSKPATGTGNYIMASVTQGLEFGIAVAVILFGVRTILGELI PAFQGIASKVVPGAIPALDCPIVFPYAQNAVLIGFMSSFIGGLVGLTILATVLGPAWGLA LILPGLVPHFFTGGAAGVYGNATGGRRGAVAGAFVNGLLVTFLPAFLLKVLGPFSSANTT FGDADFGWFGILIGYGARTGTVSGSIILALIGATILGSAILIQRRAGGWDPAPARGSSSD GVTAVVTAEEVSDDPDEATRTATASTISHRRIAPPVGAPTPPSRDELGL >gi|302034478|gb|GL383157.1| GENE 547 569518 - 570282 369 254 aa, chain - ## HITS:1 COG:Cgl2978_1 KEGG:ns NR:ns ## COG: Cgl2978_1 COG1762 # Protein_GI_number: 19554228 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Corynebacterium glutamicum # 1 146 1 144 178 137 53.0 2e-32 MIDLTDLLPPAAIRLDAHVKDWREALQAVGHLLVATDIATPRYTQAMIDNLEKNGPYIVV APGFALAHARPDSSVLRTGMSWIRLDEPVAFGHETNDPVTLVAGLAATDASAHQNVLAAL ASALADPNRRNALDTATTPQEVVSILSNEAGHRSAEASTSQNLLLTVCGNGLGTSLFLKN TTEQVLDAWAWTPYLSVEATDTISARGRCSEADAILTSGAIAQTLGELSIPVEVIDDFTS VSQVDAALRRIYDV >gi|302034478|gb|GL383157.1| GENE 548 570350 - 570505 162 51 aa, chain - ## HITS:1 COG:no KEGG:PPA0450 NR:ns ## KEGG: PPA0450 # Name: not_defined # Def: S-ribosylhomocysteinase (EC:3.13.1.-) # Organism: P.acnes # Pathway: Cysteine and methionine metabolism [PATH:pac00270] # 3 51 102 150 150 95 91.0 6e-19 MATLRDILKLNTSPAANEVQCGWGANHSIKAAQEAAHTMLNHRDHWKQVVA >gi|302034478|gb|GL383157.1| GENE 549 570582 - 570758 91 58 aa, chain - ## HITS:1 COG:Cgl2496 KEGG:ns NR:ns ## COG: Cgl2496 COG3335 # Protein_GI_number: 19553746 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Corynebacterium glutamicum # 1 41 70 110 149 66 70.0 1e-11 MHFTPTYSSQINQIERLIADITRGLLQRPDHHTVQSLERDFCKLGQSMNRKLQALYLS >gi|302034478|gb|GL383157.1| GENE 550 570725 - 570961 100 78 aa, chain - ## HITS:1 COG:RSc0110 KEGG:ns NR:ns ## COG: RSc0110 COG3335 # Protein_GI_number: 17544829 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Ralstonia solanacearum # 1 65 216 280 363 57 44.0 8e-09 MFAALNVYDGTVIPSIHWHHRAEEPKKFLQKIDKTTSKHVDVYVACDNYATHKHSSVKTQ LAKHPDPICTSLRHTHRR >gi|302034478|gb|GL383157.1| GENE 551 571094 - 571456 91 120 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313772999|gb|EFS38965.1| ## NR: gi|313772999|gb|EFS38965.1| conserved domain protein [Propionibacterium acnes HL074PA1] conserved domain protein [Propionibacterium acnes HL083PA1] conserved domain protein [Propionibacterium acnes HL007PA1] conserved domain protein [Propionibacterium acnes HL056PA1] conserved domain protein [Propionibacterium acnes HL053PA1] conserved domain protein [Propionibacterium acnes HL045PA1] conserved domain protein [Propionibacterium acnes HL038PA1] conserved domain protein [Propionibacterium acnes HL096PA2] conserved domain protein [Propionibacterium acnes HL043PA1] # 1 120 1 120 120 206 100.0 6e-52 MLDIDSACATTVIEPAAPLKRAATITVATTAETDFLILISMLLLRAILRFLKISQALFYP CLKVLYPELTQSQPSAWAGHVASRKNLRLDMIEYGVDASTGKHNSGTIHVSADSAAACQG >gi|302034478|gb|GL383157.1| GENE 552 571341 - 571727 142 128 aa, chain + ## HITS:1 COG:no KEGG:PPA0448 NR:ns ## KEGG: PPA0448 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 98 1 98 165 159 98.0 4e-38 MRIRKSVSAVVATVIVAALFSGAAGSMTVVAHAESISNTGQTVTSAMQALSDRNDLAHGG DGRIAVGDREVVRWHGGIPVAEVANSHQVSTYSWTSWGAQSRPFCAAPFRAQTTSQNQAL GQQNRRCS >gi|302034478|gb|GL383157.1| GENE 553 571626 - 571823 63 65 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|327447085|gb|EGE93739.1| ## NR: gi|327447085|gb|EGE93739.1| conserved domain protein [Propionibacterium acnes HL043PA1] # 1 63 1 63 74 105 100.0 9e-22 MIQSAAALATSYGIPALPKVKIIGAFSHISVCSRTSAILLAQGLILAGSLCTEWRSTKRA TLRPP >gi|302034478|gb|GL383157.1| GENE 554 571848 - 572294 371 148 aa, chain + ## HITS:1 COG:no KEGG:PPA0449 NR:ns ## KEGG: PPA0449 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 148 1 148 148 240 98.0 1e-62 MVVSKKFDDLLGMLGAIVFFLVIVILVMAPFIMIPALFALVFQECYLDSPWTWETVVLGG LVLFALGMGVSLLMGVLARVVAPLTHPVVNRVFKEILEFLVLWWFYSTLMHPASYAFWAS IVVMIMTTVTEPILDRAIERQKHAPNQP >gi|302034478|gb|GL383157.1| GENE 555 572445 - 573098 485 217 aa, chain - ## HITS:1 COG:lin1327 KEGG:ns NR:ns ## COG: lin1327 COG1854 # Protein_GI_number: 16800395 # Func_class: T Signal transduction mechanisms # Function: LuxS protein involved in autoinducer AI2 synthesis # Organism: Listeria innocua # 64 217 1 154 155 192 58.0 3e-49 MGMRSVQALMELTRSYAVRPSGFRLVNGYKLTETATDLLLPPGFNHSWLVARVGFVSMRE DGFMAHKMNVESFNLDHTKVAAPFVRVADVKHLPAGDTLTKYDVRFCQPNKEHLDMPAVH SLEHSFAECVRNHSDAVIDFGPMGCQTGFYLIMIGEPDVPGTCELVETTLRDILKLDATP AANEVQCGWGANHSIKAAQEAAHTMLNHRDEWEQVMA >gi|302034478|gb|GL383157.1| GENE 556 572965 - 574146 676 393 aa, chain - ## HITS:1 COG:Cgl0726 KEGG:ns NR:ns ## COG: Cgl0726 COG1482 # Protein_GI_number: 19551976 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannose isomerase # Organism: Corynebacterium glutamicum # 1 376 1 377 394 232 38.0 9e-61 MKRLTGTVRTYSWGSYDAIPDILGKEADGKPWAEYWLGAHETSPSTLDGIPLTDYIHAHP DELGDRSRKVFGARLPFLLKILSAYHPLSLQAHPDAAMARAGFARENQDGIGVDDPHRTF VDDWPKPEILVALSDFEGLCGFRDPHETRQLFDELEVLTPTDPVLGSLTERSGSAALAET FLNCLAGDDVRRQIVTEVVSGAVNHVGEDTPLGEFARTAVELDEYFPGDPSILAALMLNR VHLKPGQALSVPPGLMHSYLSGTGIEIMADSNNVVRGGLTNKHIDIDSLIQIVSFQTQEP RIIAAEEVDPGMRVFPGIDDQFRLWQLDLDPPCPAMMPASELARILLITDGYAVCSGSHG TDEIVRGQAVWIPAGERVQIDGDCDGFIAAAGL >gi|302034478|gb|GL383157.1| GENE 557 574190 - 574474 122 94 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3490 NR:ns ## KEGG: HMPREF0675_3490 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 94 1 94 94 123 100.0 3e-27 MSDSITPESAESAELCASDRAILDLEESWQAGSLSVDKETAIRDSLGLSSPRYHLRLNEL IDDEKAAQYAPSLVGRLQRVRSQQRRSRSAQLLR >gi|302034478|gb|GL383157.1| GENE 558 574398 - 574607 70 69 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFSTHTQRVQRVRERNMSSRTTNDDDGARNVTHPFMPGWPLNWHCVRFHHPRIRRVRRVV RLGSRDFGS >gi|302034478|gb|GL383157.1| GENE 559 574808 - 576442 1589 544 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 [Haemophilus parasuis 29755] # 2 544 3 547 547 616 59 1e-175 MAKLIEFNIEARRGLEAGMNTLADAVKVTLGPKGRNVVLEKSWGAPTITNDGVSIAKEIE LDDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQAMVREGLRNVTAGANPMGLKKGIE AAVQAVSARLSDMAIDIETKDQIASTASISAADPTVGEIIAEAMDKVGKEGVITVEESNT FGLELELTEGMRFDKGYISPYFVTDTERMEAVLEDPYILIVNSKISSLKDLLPVLEKVMQ SGKPLFVIAEDVEGEALAGLIVNKIRGTFKSVAVKAPGFGDRRKAMLNDIAILTGGQVIS EEVGLSLDAVTLDLLGRARQVVVTKDEATIVDGAGDSEQIAGRVSQIRKEIENSDSDYDR EKLQERLAKLAGGVAVIKVGAATEVELKERKHRIEDAVRNAKAAVEEGIIPGGGVALLQA SKAAEIEGLEGDELTGAQIVLAACTAPLKQIAINAGLEGGVVAEKVAGLPAGQGLNAAND EYVDMVEAGIIDPAKVTRSALQNAASIAALFLTTEAVIADKPEPVKAPAGGGDMDGMGGM GGMM >gi|302034478|gb|GL383157.1| GENE 560 576577 - 577653 1050 358 aa, chain - ## HITS:1 COG:all4020 KEGG:ns NR:ns ## COG: all4020 COG0176 # Protein_GI_number: 17231512 # Func_class: G Carbohydrate transport and metabolism # Function: Transaldolase # Organism: Nostoc sp. PCC 7120 # 20 209 15 209 381 76 29.0 7e-14 MKINYTPGPLLDASRTTPTALWNDSADLDELRQSIAFGGVGATCNPVIGYTTIKKHPDIW EDRIRAIAENNPTWGESQIGWQAIKDMSVEAAKLLEPIFVEHKGRNGRLSIQTDPRLHRD AKALADQAEEFSNLAPNIIVKIPCTSVGIEAIEEATYRGVSVNVTVSFTVPQAVKSAEAI ERGLQRRVAEGKPIDEMGPVVTIMAGRLDDWLKIVAERDRLFIDPGHLEWAGIAAIKRAN QIFVERGFHSRVLCAAFRNVLQWSELIGGDLVVSPPFKWQKRINDSDYHVVPRIDEPVAA EHLDALKKIPEFMRAYDPDGMTIKEFDTFGATRRTLRQFLQADADLDTLVRDIITPAI >gi|302034478|gb|GL383157.1| GENE 561 577755 - 578498 390 247 aa, chain - ## HITS:1 COG:Cgl0157 KEGG:ns NR:ns ## COG: Cgl0157 COG2188 # Protein_GI_number: 19551407 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Corynebacterium glutamicum # 12 247 16 252 253 192 44.0 5e-49 MENEPYIADITIDRSRPEPLHTQIAEPLAQLIESGELPPGTRIEDEMSMAARLHVSRPTA RRAFETLTQRGLVIRRRGIGTQVTPTRVHRSMNLTSLYDDLQASGQRPRTSVLDWTVETA PPAVAAALGLPSNSEVAHFRRLRMSQDEPLAIMTNWVPVDLAPSAEELRTTGFYDYLRSR DVVVAVGHQRFSARLALPDEARLLNEPPGAALLTMQRTACDESNRVIEFGQHVYRASIYA YENTVYA >gi|302034478|gb|GL383157.1| GENE 562 578473 - 578691 91 72 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|315093919|gb|EFT65895.1| ## NR: gi|315093919|gb|EFT65895.1| hypothetical protein HMPREF9582_00225 [Propionibacterium acnes HL060PA1] # 1 72 1 72 72 112 98.0 9e-24 MSNASDTTNQETYVNTIDNVASHPTPNTEIAARLYPDAARTIGPPLALPTNRLCVSTYPQ MRNDSGERALHR >gi|302034478|gb|GL383157.1| GENE 563 578713 - 579702 502 329 aa, chain + ## HITS:1 COG:Cgl0158 KEGG:ns NR:ns ## COG: Cgl0158 COG0524 # Protein_GI_number: 19551408 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Corynebacterium glutamicum # 10 315 9 314 318 363 58.0 1e-100 MVSSRRRDLDVLTMGRIGVDIYPLQYGVGLEDVTSFGKFLGGSPTNVAVAAARLRHSAAV VTAVGDDPFGRFCRREMARLGVYDNYVLVNSELPTPVTFCEIFPPDDFPLYFYRRPTAPD LRITPDDVPEDAVRNAQILWLSVTGLCQQPSYDAHCRALEVRGKAEHTVLDLDYRSMFWQ SAAKAHEAVSAVLPHVTVAIGNREECEMAVGESDPDRAAHALLDAGVQLAVVKQGPKGTL AMTREERVEVAPTPIDVTNGLGAGDSFGGSLCHGLLEGWSLAETIQAASAAGALVATRLE CSTAMPSEPELFAMMAKHPDIAIKEEHLS >gi|302034478|gb|GL383157.1| GENE 564 579699 - 580586 487 295 aa, chain + ## HITS:1 COG:no KEGG:PPA0457 NR:ns ## KEGG: PPA0457 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 295 52 346 346 528 100.0 1e-148 MTRTPLIDKLLDRRLADPVRFADRVRQRPRATWSPTEPLMVVAADHPARGALAAGGRADA MADREHLLERCVTALGRPGVNGFLGTADMVADLANLDALDGKVVFGSMNRGGFAGASFEL DDRMTGYDVQGILDEDLTGGKMLLRFDLSDPGTATTAQACAEAVTTLARARRIAMVEPFI SYRADDGKVVNDLSADAVVKSVVMASGLGADTSWTWLKLPAVDDMERVVRATSLPILLLG GEVSTDPEETRRRWATALAARHVRGLVLGRSVLYPPDSDVATAIDNAVQLLGVQA >gi|302034478|gb|GL383157.1| GENE 565 580583 - 581455 464 290 aa, chain + ## HITS:1 COG:Cgl0161 KEGG:ns NR:ns ## COG: Cgl0161 COG3718 # Protein_GI_number: 19551411 # Func_class: G Carbohydrate transport and metabolism # Function: Uncharacterized enzyme involved in inositol metabolism # Organism: Corynebacterium glutamicum # 7 282 6 288 296 221 44.0 2e-57 MTELVLRSGSTASGCRDVVVDPKCAGWTYSGLTIASLTKDETLELTTDDHEYLVLPLEGS FTVQGDGFRADLAGRSTIWGEVTDYAFVPRHRTITVTAVSGGRVALPNALASEDLEPRYC PPTEVRVELRGAGNCSRQVVNYAVANPVHTSRLLACEVLTPGGNWSSYPPHKHDEESQVE HELEEIYYFEIRGDEHGPGMAFHGTYGTPDRPIHVAEMISNGDVALVPHGWHGPCAAAPG YDLYYLNVMAGPGAAEWKSVDDPHYGWIRQTWQDQDIDPRLPLAVDDSKE >gi|302034478|gb|GL383157.1| GENE 566 581458 - 583356 1079 632 aa, chain + ## HITS:1 COG:Cgl0162 KEGG:ns NR:ns ## COG: Cgl0162 COG3962 # Protein_GI_number: 19551412 # Func_class: E Amino acid transport and metabolism # Function: Acetolactate synthase # Organism: Corynebacterium glutamicum # 4 629 3 633 637 611 51.0 1e-174 MTEQTVRLSVGQAIVRYLTHQYTERDGVERRFIRGVFGIFGHGNATGLGQALLQNEAAPD DEEGRLEYWMGRNEQGMVHACSAYARATNRLQALAATASIGPGSLNMVTGAALATTNRVP VLLFPSDIFANRAPDPVLQQLEDPTNPDVSCNDAFRPVSKFWDRVNRPEQLMVSLPRAMR VLTDPVDTGAAVICLPEDVQTEVYDWPVSFFAKKVWYIDRRLPDRAAVVRAAQAIRAARC PLIISGGGTIYSEASQELRDFASATGIPVADTQAGKGAINWDHPCAVGGVGATGSDSANA LAAQADLIIGIGTRYSDFTTGSQTAFKNPDVTFVNVNVGAFDAAKQGAQMLVADAREALT ALSKELDGYRVPQEWSDLASAKAKAWAEVTDRCYHLGHGPLPAQTEVFGALNELMGDDDV VINAAGSMPGDLQCLWRASTPVQYHVEYAFSCMGYEIPASLGVKMALPDSEVVAIVGDGT YQMLPMELATIVQEGAKVILVLLQNYGFASIGALSESHGSQRFGTKYRQHDDGQGHVVGD DALLPLDIAANARSWGIDVLEVRTIKEFREAYRKAEASDHATMIHIETDLYGPNPPASGW WDVPVTSQSRLKSTQKAYAEYTGQVAAQRRFF >gi|302034478|gb|GL383157.1| GENE 567 583501 - 583737 306 78 aa, chain - ## HITS:1 COG:no KEGG:PPA0460 NR:ns ## KEGG: PPA0460 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 78 27 104 104 112 98.0 6e-24 MSLSYVDSGIILRTPAGMGSVMHSQAVTLLRFVPAALVLFALAIAGVINQAPILTIVSGL MTVALTITLSMMHFFDNA >gi|302034478|gb|GL383157.1| GENE 568 583736 - 584041 74 101 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|315092658|gb|EFT64634.1| ## NR: gi|315092658|gb|EFT64634.1| hypothetical protein HMPREF9578_01511 [Propionibacterium acnes HL110PA4] # 62 100 1 39 40 62 74.0 1e-08 MCDVSTPFRMPKHDRTAVLGTAVCALKIPRTVGNCPNDKHVSTIARESTQRLRGWCYFIS GMLVGTEMFWRRCERLDRRGGSAVWNRDFYLLVQITSNRLL >gi|302034478|gb|GL383157.1| GENE 569 584104 - 585597 1340 497 aa, chain + ## HITS:1 COG:Cgl0160 KEGG:ns NR:ns ## COG: Cgl0160 COG1012 # Protein_GI_number: 19551410 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Corynebacterium glutamicum # 2 489 5 495 504 508 49.0 1e-143 MKTIRQWVGGEYYEGSPLGVIPVENPATGEVTAELLQASKEDLDHTVEVARDAQKEWANY SLSKRVAIMFKMRQLVLDHQDEMARLIVEEHGKNYSDAIGEIQRGRETFDFATAINVALK GEYSHDVSTGVDIHTTRQPVGVVAGICPFNFPAMVPMWMHPLAVATGNAFILKPASPTPS ASLLTAELYKEAGLPDGVFNVLSGDRRSVQDILVHPGIDAISFVGSTPVAHIVQDTGVSH GKRVQALGGANNHAIVMPDSDLDFAAQHISASAFGAAGERCMALPVVVAVGGCGPQVAEK VKKHAEAIKVGEGMGEGVEMGPVISAKAKDRIVGLIDDAEKRGSKVVLDGRGLTVPGYEN GHFLGPTVLDDVPLDAPVYTEEVFGPVLAIVHADTYEEALKIVNAQPFGNGSAIFTNDGG VARRFTLDVEAGMVGVNVPIPTPVAFYSFGGWKESLLGDTHIHGPEGVTFYTRAKAITER WPTEKTYAATMSFQREE >gi|302034478|gb|GL383157.1| GENE 570 585693 - 586673 460 326 aa, chain + ## HITS:1 COG:VC2677 KEGG:ns NR:ns ## COG: VC2677 COG1609 # Protein_GI_number: 15642672 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Vibrio cholerae # 4 324 2 329 335 103 26.0 5e-22 MRNSTQTDVARMDGVSRGLVSLALAGRPGVSSATRRRLQDAADRLGYSRDLSAASLATGS SPVLGIILPNLRNPFFETVVSYLSVAAERVGWLPLVGTASDDTRHEEAVLRRFREFRAVG VIVVSPVGDLESLAALSGPTSPLVLLGAENQSGVVPCVHVDEDTAAQLIVEHLGSQGVRR VVSLAEECGSGMVWVLRRRAALIAACQSAGIECVPAIVERGEAVAPILARFIDDAQTDVG VVAHNDVVALDALSVLRSVGLESRRWIPVVGFDDTHLASRPEFDLTSVNQQPGALVDVAL DMVAGAVRGLDHTVEPRLVVRSSSKR >gi|302034478|gb|GL383157.1| GENE 571 586822 - 587142 94 106 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFASPDQVLGDLTMQCVRHDDRHDVYIVSVHDVMPVSYCSFVAITVAGTTGEGLVRVTDG SEPYRGYPLGSEHGPDLAPGVGVRSTSHTGSDDGHRQGMPLRRGWL >gi|302034478|gb|GL383157.1| GENE 572 587351 - 588013 492 220 aa, chain + ## HITS:1 COG:Cgl0171 KEGG:ns NR:ns ## COG: Cgl0171 COG0673 # Protein_GI_number: 19551421 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Corynebacterium glutamicum # 1 217 178 399 411 165 43.0 6e-41 MAWRYRGPQGSGALGDLGSHIIDVAEFVCGPIRSVRGGAFATIIDKRPPALEGVAGGRGM TVSAQAIETVENDDIAVFNMTFESGAIGTIVVSRVAFGLPNSMEFDVFGTQGRASFDLAR SGEIIVDDTSTPEGFSGPRQVLSNPTFPYYKGGSSMDFAGVGSTQIEQFTYQARAFLDQV LGLDEEFPLVPSFAHGYRTMCIADAVARSAAAGGKTIDLT >gi|302034478|gb|GL383157.1| GENE 573 588058 - 589056 630 332 aa, chain + ## HITS:1 COG:Cgl0172 KEGG:ns NR:ns ## COG: Cgl0172 COG1082 # Protein_GI_number: 19551422 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate isomerases/epimerases # Organism: Corynebacterium glutamicum # 3 332 1 331 337 299 46.0 5e-81 MSMNIGAYTACLHNYDLAEALDILKTNGLTGVEVNVGGFIPSPHCPVDTLMTSQTAREDY MGIFEDKEMRLAGLNTSGNPLSPLPDVGPRHAYDLRRAIELAGKLGITDLVCMSGTPGSD RHAKYPSWVVNPWNGVELEVLEYQKSVVDPFWREMDLRAQDAGVKLALELHPHNLVFTPV NFLEFAERIDARNIGVNMDPSHLMWQGMDIIAAIELLGDHIFHVHAKDTVILPGIATRGV LDSSFGPVPDDPDVRVQTGMEHYCSSWPSDPAWRFVAIGNGHDVTWWTNFLRAIRDVNPG MNINIEHEDQSLAQLDGIAVSARNLLAAEQAV >gi|302034478|gb|GL383157.1| GENE 574 589128 - 589994 656 288 aa, chain + ## HITS:1 COG:BH2310 KEGG:ns NR:ns ## COG: BH2310 COG1082 # Protein_GI_number: 15614873 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate isomerases/epimerases # Organism: Bacillus halodurans # 4 287 3 285 294 270 42.0 3e-72 MVDIALDPNMYYCSMSTADTLRKAADLGFRYVELSPNEEFHFWHRYPKADDAFVTEMRKA VRETGVTIRTLNPVFNWSSPDEAERRNQMRNWRRLLELADQLDVHEITSEFSGDPNSPRE CEAAWYRSIEELAPSFERYGIRLNMEAHPYDFIELHDDACRTVRGTNLDWIGYEYCCPHT FHLSNGAGDVRRMIHGCADRLREVHVADAFNHAAHDGNRYIINPPGADVRVHQHNEIGLG DVPFDDVFEALRDVGFDGVMSVCVFGWHERADEINKSMLARLNREFVA >gi|302034478|gb|GL383157.1| GENE 575 590204 - 591415 672 403 aa, chain + ## HITS:1 COG:BH0710 KEGG:ns NR:ns ## COG: BH0710 COG0673 # Protein_GI_number: 15613273 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Bacillus halodurans # 10 392 3 385 388 223 34.0 6e-58 MGVVMEKRRTIGVGVVSLGWMGRLHTRAYKALAEKFPEIDVNIRLVSCCDVVAENRRQAV DRLGFCTAVEDYHDLIGNPEVDVVSICAPNFLHRDIALAAAEVGKPFWIEKPMGTNAKQS RQIAEAAEAKGLVTSVGFNYRHTPSIEFARQLIADGRLGTVTNARAWLIADYASDPHGPL TWRYDRERAGAGVILDLMGHGEDLVQYLLKGRFTEVSAVSETFIRQRPKPLKEGIGHTGW VVSDELGPVGNEDYCAVIARMENGVMCTLESSRVSVGPRAEYIVEIYGTDGSIRWNFEDL NHLQVCLGRNNRALQGYVNCMAGPDFPEFMRFQPGAGTSMGFDDMKVVEAAKFVRGVLDG QQYGPSVADGWASAEVNDAIVASCGDHAWHDVKPVSGRTTFDK >gi|302034478|gb|GL383157.1| GENE 576 591564 - 593171 1623 535 aa, chain + ## HITS:1 COG:BS_yfiG KEGG:ns NR:ns ## COG: BS_yfiG COG0477 # Protein_GI_number: 16077893 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Bacillus subtilis # 11 527 17 460 482 331 38.0 3e-90 MVDETPPSGKHRGIGALAAVATLGSLLFGYDTGVISGALPYLYMPHLAGGLALTPMQEGA IGGTLLIGAAIGAVTGGIMSDRWGRHHNITILAVIFLLGALGTTFSPNVFVMYVFRFVLG FAVGAASATVPVYLAENAPKRIRGSIVAIDQLMIVTGQLLAFSMNAIINAAHGGPQLIIK ANNNPDSLGITKGTYSWDQILALQASKGGPLEGDQYRAFVENLVIQSGNGAAWRWMLVLC SIPAIALWIGIRLMPESARWYLAKGRVADAVGALKRVRDPQKDGPLDAEVEEMHVTQQRE LENKYQGNAFAHVWRTPWLRKLMLVGIFLAIVNQTTGVNTVMYYAPKVLEYAGMTTSASI TAQVANGVMSVIGSVGGLWLILKFSRRSLLIFDVSAVGITLLVIAGTFQFTIAPHIADKT TPPTWAPYLILGLMAVFMLIVQSTNGTVVWTMLGEMFPANVRGIMNGTAIFFMWVINAVI TFTFPSMMASLGGGLTYTIYGMMNLVIAVVLFKIMPETRNKSLEQIETYMEERYS >gi|302034478|gb|GL383157.1| GENE 577 593780 - 594643 727 287 aa, chain - ## HITS:1 COG:AGpA635 KEGG:ns NR:ns ## COG: AGpA635 COG1082 # Protein_GI_number: 16119662 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate isomerases/epimerases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 286 3 306 307 137 31.0 2e-32 MKIAGAPISWGVCEVPNWGYQMTPERVLTEMKQIGLTATEFGPQGWLPIEAEARATEVKK YGLKPVGAFFLSVMHDPDFDPIPMVNKELDAFEAAGGDYLILATDSGRDGYDDRPVLDEA GWKTLFTNLDQIREVCASRNVTACLHPHWGTMVQNRDEVIRVLENSSIGLCLDTGHLACG GTDVVELVRKYANRVDIVHAKDVHKEMADKLLPGEITWSEGIRAGMFAPIGDGDIDFAAI VRLLDEAGFDGYYVLEQDIMIDEEPPADDGPIINAKKSYEALASLGR >gi|302034478|gb|GL383157.1| GENE 578 594621 - 594806 145 61 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGAPAIFIDVLLVSWRPELLCIRPLSVVYVLSNSGAIAVAGVGIGIDDGLCANIRESCRY W >gi|302034478|gb|GL383157.1| GENE 579 594841 - 595827 932 328 aa, chain + ## HITS:1 COG:Cgl3002 KEGG:ns NR:ns ## COG: Cgl3002 COG0673 # Protein_GI_number: 19554252 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Corynebacterium glutamicum # 2 328 3 330 335 329 53.0 4e-90 MIRIAIIGAGRIGHVHARAIQGRNDVTLALVCDPFEQNARALAGEYDVRYCLDPDEVFDD STIDAVVIGSPTQFHVDHILKAVNGGKRVMCEKPIALDVESAKRCINELGDRADQVMMGF NRRFDPTFSALKSRLDDGEIGSLQQLTVISRDPAAPSASYIAGSGGIFKDMTIHDFDMVR HFLGDIAEVNAVGTNVSPEIAEQGDFDQVIVTLKSRDGKLATIINSRTCAFGYDQRLEAF GADGMLSADNLTDAAVRMATSTQTDAKTAIMDFFLERYEDAYRIELETFLDSIAIGGAVS PSVRDGYEALVLADAATRSAQEHRVVAL >gi|302034478|gb|GL383157.1| GENE 580 596033 - 596842 546 269 aa, chain + ## HITS:1 COG:CC2538 KEGG:ns NR:ns ## COG: CC2538 COG1266 # Protein_GI_number: 16126777 # Func_class: R General function prediction only # Function: Predicted metal-dependent membrane protease # Organism: Caulobacter vibrioides # 95 245 130 285 309 93 41.0 5e-19 MVILGVGQAGFDLVLTALVGGHPDAQTSTILLLASFAGVWLVLWAWMRFVEQRPMSCLGF RGPGSDVWIGVAIAIAILAIDVVVMTVSGQVTMSWARPSIMAAVSIVAAILLFLVQGCAE EAVLRGYLMQSVAAKWGIPAGLAIQAVVFAALHGANPGTTWVALVNVTGFGLMQGLLVVW RGNLLAAMGFHTVWNWLQGMVLGFDVSGLELHHSVMTTARTTGSHSWLTGGTFGAEGSVI NTIVLAILITCLLVTMRHDWRDNEAYGIA >gi|302034478|gb|GL383157.1| GENE 581 596829 - 597515 361 228 aa, chain + ## HITS:1 COG:ZcutCm KEGG:ns NR:ns ## COG: ZcutCm COG3142 # Protein_GI_number: 15804982 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in copper resistance # Organism: Escherichia coli O157:H7 EDL933 # 1 209 1 204 248 92 36.0 7e-19 MALLEVICLHEHDAKRAAAGGADRIELVGTMDDGGLAPSPELLARTLSAVHIPVRPMLRL DGGFRADPRRRDEILRLASAYRDLGADGPVLGFLDEATGVDVETVIELTEGCQRWTFHRA IDNCLEPDKGWAQLLGLHGLDQVLTAGSPRGVEHGLDDLIARASADLRVADLIMAGGGLR AEHVPWLYRAGVRAFHIGSPARPQGSWKAWVDADLVRSWRDLLDRLAG >gi|302034478|gb|GL383157.1| GENE 582 597529 - 598533 721 334 aa, chain - ## HITS:1 COG:no KEGG:PPA0472 NR:ns ## KEGG: PPA0472 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 334 1 334 334 625 99.0 1e-177 MSGKALIARRTALGGLLVATGAAIGVPVVRATNRPQKKAPRKPVPTTVTSPAAPGPYVPF PYQDELSTYLNTRDGEQSVAMRVHGQREIQVFNHGATTYITASIIKLAIMETVMIQAVGE KRQLTEGEKNLLVPMIENSSNDAATALWKKVGKADGVRTAMRRMGATHTTFDPEGRWGLT STTAADQVALTDHIFCPNTIIPESMRAYARELMSNVEDDQNWGMTAGMKSPFVKNGWLSL DDGWHVNSVASTGTAGYTVVGLTHSATASMDDLVETIEGMARIIARHQPRSVTTPSSSTA PTQTTAPKPQGVEDDHGHVSFRAPGTRDIWIQAF >gi|302034478|gb|GL383157.1| GENE 583 598577 - 600235 1211 552 aa, chain - ## HITS:1 COG:Cgl0793 KEGG:ns NR:ns ## COG: Cgl0793 COG1061 # Protein_GI_number: 19552043 # Func_class: K Transcription; L Replication, recombination and repair # Function: DNA or RNA helicases of superfamily II # Organism: Corynebacterium glutamicum # 6 545 6 548 557 765 69.0 0 MTSVPGPLIVQSDHTLLLEVDHPQADECRHAIAPFAELERAPEHIHTYRLTPLGLWNAMA AGHDAEQVVDILMRYSRYPVASGLLIDVTETMSRYGRLRIEKHPTHGLVLVSTERAILTE VLRSKSVRGLVGNQIDDETAVVHPSQRGTLKQALLKLGWPAEDLAGYVDGEHHDIDLDED GWSLRPYQKVAAQSFWDGGSGVVVLPCGAGKTVVGATAMSLARCTTLILVTNTVSARQWK EELVRRTSLAPDDIGEYSGSRKQVRPVTIATYQVITTKRHGVHPHLELFEARDWGLVIYD EVHLLPAPVFRMTADLQARRRLGLTATLVREDGHEDDVFTLIGPKRYDAPWKEIEAQGWI APADCVEVRVSLSESDRMACAMAEPDVRYRMAATLPIKNKVVRDLVERHRGQPTLVIGQY VDQLEELAAELKCPIITGSTTPTRRQEIYQDFREGQIDLLVVSKVANFSIDLPSAEVAIQ VSGAFGSRQEEAQRLGRLLRPKEGLVARFYAVVSRDTVDTDFASHRQRFLAEQGYSYRII DADDLDALDRTA >gi|302034478|gb|GL383157.1| GENE 584 600867 - 602996 1040 709 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3517 NR:ns ## KEGG: HMPREF0675_3517 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 709 1 709 709 1240 99.0 0 MSPSEEPTTLASTIRNLDAQSLSRLLTLRPDLANPTPRDLTEVSSRASTHASIIAAISSL DRWRLSLLTALAALGDLRFTELAEALCQGWPIKPEAIQADVADGISDLLNMALVLEDSGQ LHVIQIVTAHLSGYPAGLAPASVLPMNPNEVAEKLAAAGSKARSVLERLVWSPTGHVPNA RRAVTPATATTPVETALAHRLLRPLSDDTVILPREVSLMLRGNRLFAEQPSPTPPPWSEP HQTNLVNRAGLGTALEAVSAMSALLEAMERHNCALLASGGIAKRDARIVLSRVAPGDDGW VYLALAAAGGLIGADGRSWLPTPLADRWRTDSLWGQWVSLREAWRHIPQLPGNLGNALDA SAPATAQAWRRLIHRELHSAEPGTPIETKVIANRIRWRQPGTTVDDSLVEAVLDECRVLG MVALDARTDLVDARTCADMPERTDEVILQSDLTAVAPGPLTPDTAADLALLADRESTGIA GVRRFNRSSLRRALDAGWTGERVRQWWAEHSLGDVPQSLLVLLNDVVRDHGRVSVAAAGA LLEVDDPATVEAILRSSLTTDVGLRRVGPQVLVAQAEPDQVLAGLRQLGMSPVARDAHGD VFSAPPPPRAKVDVPASSAPQADPEELAASLLDKRGRGFSDRRQLIAQLHQAQQDGTWMY IERVVDDGTSVRQTVRIMAATAGAVRCVIRGGGGVTIVPVSRITSCQPI >gi|302034478|gb|GL383157.1| GENE 585 602993 - 603367 344 124 aa, chain - ## HITS:1 COG:no KEGG:PPA0475 NR:ns ## KEGG: PPA0475 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 124 128 251 251 231 100.0 6e-60 MPSRLDPRTPSKAGSRSFLDLCQGLGWPWIVVLVLGCAWSPLSIPALFITWWLAWRHPFA AGRLTKALTAVTVAVIIGGAIESPVRTVLAQFAWMSRLGCVIMLGLGFILIDRQLTPDDP GSSR >gi|302034478|gb|GL383157.1| GENE 586 603922 - 604707 676 261 aa, chain + ## HITS:1 COG:Cgl2592 KEGG:ns NR:ns ## COG: Cgl2592 COG0363 # Protein_GI_number: 19553842 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase # Organism: Corynebacterium glutamicum # 1 248 1 245 253 235 52.0 7e-62 MEVIICSDEQAVGRIAADRIAKVLGRAKAPVLGVATGSTPLTTYSSLAALAAEGKADFTD LRAFALDEYIGLPADDERSYAATIRHTVTEQLGLDPANVHTPDGMADDLNAACAAYETAI QEADGVDVQILGIGANGHIGFNEPTSSLSSRTRVKTLAERTKADNARFFEEGEKVPSHCV TQGLGTIMDARNVVLLAIGANKADALAGAVEGPVSAMCPASVLQFHPHVLVIADDAAASK LTMAEYFRWTDSQRGDLSGAM >gi|302034478|gb|GL383157.1| GENE 587 604854 - 605237 362 127 aa, chain + ## HITS:1 COG:MT0893 KEGG:ns NR:ns ## COG: MT0893 COG1278 # Protein_GI_number: 15840284 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Mycobacterium tuberculosis CDC1551 # 1 126 1 134 135 125 51.0 2e-29 MPTGKVRFYDATKGFGFLTKDGGGDVYVNASALPAGVNTLKPGQKVDFGIVEGRRGEQAL SLQIIETPASLSKASRKKPQDMAVICEDLIKMLDKMGNGYRHGRHSDSRTAGAVAKMLRA VADELEL >gi|302034478|gb|GL383157.1| GENE 588 605237 - 606037 508 266 aa, chain + ## HITS:1 COG:no KEGG:PPA0478 NR:ns ## KEGG: PPA0478 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 266 1 266 266 514 100.0 1e-144 MTQVTSKPRTATRTIKADATIAKAVDQAREAAEYRAGDFGVGEHVGTIAEGERVLTHLFE CPHPGYRGWRWAVTMSRALRGRNVTVNEVVLVPGEDSLLAPPWVPWRDRVRAGDIAAGTL MPTADNDPRLEPGYTGGELAADEDPAEWAATRAVASELGLGRERLLSREGRDSTAERWLA GEGGPDNATSHHAPASCVTCGYFVRLQHSLGRVFGVCSNEYSPSDGSVVHVDHGCGGHSD VVEKRRGIELPEPVFDTISVDESLFD >gi|302034478|gb|GL383157.1| GENE 589 606075 - 606347 308 90 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3522 NR:ns ## KEGG: HMPREF0675_3522 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 90 1 90 90 169 100.0 3e-41 MTCHNNVAGHYDGAVSNHHLLTQANVAPVDENGVTVGIVGTIAFAVASLICWIMLDRLTE TGYRDWLWICLTGTGLGVVGTAYCWQRSRH >gi|302034478|gb|GL383157.1| GENE 590 606471 - 607874 1340 467 aa, chain + ## HITS:1 COG:Cgl0801 KEGG:ns NR:ns ## COG: Cgl0801 COG2252 # Protein_GI_number: 19552051 # Func_class: R General function prediction only # Function: Permeases # Organism: Corynebacterium glutamicum # 1 465 7 453 453 301 46.0 3e-81 MAYILALNPLIIGTAADKNGKLLNGAPKFLDAAGTSLNTAGIDDNKIMVMAVTAFVAAIM TIAMGVWGRFPMGIATGLGINSLLAYVVAPTMTWSQAMGLVVWEGIFILVFVLTGVREMI FRAVPNSLRSAISVGIGLFIAFVGFVDSGVIRPGSGTPVTLGVGGSLEGWPILLCLFGFL LLVVLHQRHIKGSMLIAIIGTSLVGVAIEAVGNIGAQSDKNPTGWALNVPRLPGASDFRW PDLGLLGHVDLFGGFLANGHFRIGVFLGTLLVVFSLMLADFFDTMGTVVAIGDHAGLLDE TGNPEHLKGILVVDALAAVAGGLGSASSATGYVESAAGVGEGARTGIASIVTGLGFLLAM FLSPIVSIIPSEAAAPVLVFVGFLMMAQVTRIDWKHVEEGLPAFLGMVLMPFAYSITTGI GAGLIMFCITKVIAGKARSVHPLLWVVALLFVVYFSQTLLMKLFGQL >gi|302034478|gb|GL383157.1| GENE 591 607849 - 608559 300 236 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3524 NR:ns ## KEGG: HMPREF0675_3524 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 236 1 236 236 466 100.0 1e-130 MGGLRFNAIAIDEVRDIFGADEGLAMKLRRWAEARFSVPVHHHRRPRWRSPFHPLYKPNV ECSMLPTGWPTPHDVEDLVCGRYIESDRSARCWRLVNEWLTHLSWGWTEIPMSVARFEEL DRDLAAAGLPSTYSLKRLMDEDPQIPLRPAPGMKIGYAGTRQILATWVELSEVIGTVPIA RRGEVNAVLKFLSSYPGWNHLAVDLGRPAPGLLVVWQPDTVEDAHPTGLRAGRTAS >gi|302034478|gb|GL383157.1| GENE 592 608702 - 609706 576 334 aa, chain + ## HITS:1 COG:no KEGG:PPA0482 NR:ns ## KEGG: PPA0482 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 334 7 340 340 588 99.0 1e-167 MAGCNIVTQRSRTRRRASRAASALLALGCAWGLSVSPAAAADFTVRTDKKLGKPVGMAAD LHHDWYWITDGSSSTVHSLLAVDKTGKEVHRVVWEPAFHDVEAMSWARGVLYVADIGDKK AQRRGIRVMSPTSTAAKQSTYYEWMFTYPDGAHDAKALTVSPKGSFYIITDGPHPAIYRG GPQVSRTESNPLEKVADAPAGVKDATFLPDGSRMALLTDHEVRIVDAYSWKTVANAAFSG GQAIATDTTQKTLEIATSGNKVRGIKFPTTLTSITPTPSHSPKAKVVTPANGKPTSKARS GTFIAVMGAVVVALCAGVVTFFYGRSRDTTWRHR >gi|302034478|gb|GL383157.1| GENE 593 609703 - 610707 693 334 aa, chain - ## HITS:1 COG:ML2136 KEGG:ns NR:ns ## COG: ML2136 COG1932 # Protein_GI_number: 15828146 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoserine aminotransferase # Organism: Mycobacterium leprae # 2 331 46 374 376 367 56.0 1e-101 MGTSHRQPPVRHVVAAIREELTELYNLPTDYEVALGNGGATLFWDMATVSLVEKRAATGV YGEFTRKFSSALQRAPFLADPAVFQAEPGKLALPKAVSDVDTYAWAHNETSTGVVAPVRR PNDIDDNSLVLVDATSAAGGVAADMSTIDAYYFSPQKNLSSDGGLWLAILSPAAIERSNR VTSSARWVPQMLDLSLAVTNSRADQTLNTPALATLVMLEAQCRWLLDQGGMAWAASRTAS TSGILYRWAEDNPLTTPFVADPALRSPVVVTIDIDESVDAARLCARARDNGILDIEPYRK LGRNQIRIATFSSIEPSDVEALTACLDWLLENRD >gi|302034478|gb|GL383157.1| GENE 594 610914 - 612044 760 376 aa, chain + ## HITS:1 COG:lin2213 KEGG:ns NR:ns ## COG: lin2213 COG1820 # Protein_GI_number: 16801278 # Func_class: G Carbohydrate transport and metabolism # Function: N-acetylglucosamine-6-phosphate deacetylase # Organism: Listeria innocua # 20 374 18 378 380 205 35.0 1e-52 MITRIASHHVVDRDGSDSPATITVEAGRISDVSEGIDPKAELVDEWILPGYVDTHCHGGA GADFTDPDREAALRAVHYHRSQGSTTLFASTVTAAIDDVVAQIGRLRQLVDLDEIAGIHL EGPFLAESRKGAHAVELLCDPDPVSVGRLIEAGGSALKMVTIAPERAHGLEAVTTFTTAG VHAAIGHTECDNTTASAAVDAGADVITHLFNAMPSIHHRKPGPVPPMLTDSRVVCELICD GVHLAPDVIRMAMSSAGPKRIALVTDAMSATGQPDGDYILGSLPVKVVDGRARLLAADGS LGAIAGSTLTMGRAVEFVTSVVGIPLGQVAVMAATTPAKLHGLNEVGVIEEGHWADLCLT DAKGHLVRVIHRGEAV >gi|302034478|gb|GL383157.1| GENE 595 612198 - 612896 477 232 aa, chain + ## HITS:1 COG:MT2784 KEGG:ns NR:ns ## COG: MT2784 COG1321 # Protein_GI_number: 15842249 # Func_class: K Transcription # Function: Mn-dependent transcriptional regulator # Organism: Mycobacterium tuberculosis CDC1551 # 3 206 2 203 230 176 51.0 3e-44 MSSELVDTTEMYLRTFYELLEEGVELRRARIVERLHQSGPTVSQTVARMERDGLVVVESD RSISLTQEGHDVAQTVMRKHRLAECLLTQIIGLRPDLVHDEACRWEHVISGEVEKRLTGL LENPDVSPYGCPLPPEQAGCRPDGSARFRDDSKPLDEVIAETGCPVSVTVTRLSEFFQAT EGNLADVYAAGLLPGKSVEVDDDADGIRLTGPSGSIVVDPEILSGLFVAQNS >gi|302034478|gb|GL383157.1| GENE 596 612917 - 613996 568 359 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3529 NR:ns ## KEGG: HMPREF0675_3529 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 359 1 359 359 704 99.0 0 MGVPQVVCPSQLPDLDQIAALCESGWYDTADSMLRMAHASESANPHVVQAAGVMAVARRV LALDAEDFEDIGEALPADLRSRLVDSGFPHHPRAAERGALGDLIPLYELMLEVLDIRMRR EEPQQVVVTCHILGEYLAQLAWQPVLGDGGDPLTLPGKVGQKWGGDGQGCAHTSAMNATA RRSMHAAQGDEEGYTSYLDKFHSRLGEALGVCAMNHATIDAGERPDVGITCPDPCRWVLA GTWEERRALDARVRLARIFQESGLVALRHHAPVGHFFGVPSGSEIGNAWVMTWNKLNEQW ADGSNPMLDPSAPGYDVDASDGALPGLARMVSVIAARPIRAGHLLRDLGVTAIAELKAV >gi|302034478|gb|GL383157.1| GENE 597 614118 - 614483 368 121 aa, chain + ## HITS:1 COG:Cgl2917 KEGG:ns NR:ns ## COG: Cgl2917 COG0526 # Protein_GI_number: 19554167 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Corynebacterium glutamicum # 1 118 1 118 124 130 49.0 5e-31 MATVALTKDNFSSTIDSNDVVLIDFWASWCGPCQRFSPIYEDASGRHSDVTFAKVDTEDQ QELSAGLEITSIPTIMAFRAGYLVFRQSGLLQGRQLDELIEKVKEIDVEDLKKQAAAQNQ G >gi|302034478|gb|GL383157.1| GENE 598 614379 - 614570 97 63 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTKHRPTAGRYHLPPALSSAFQLGMESPVSALVLGRGLLLEILDVDLLDLLNKLIKLATL QQA >gi|302034478|gb|GL383157.1| GENE 599 614655 - 616271 1245 538 aa, chain + ## HITS:1 COG:BS_yfiG KEGG:ns NR:ns ## COG: BS_yfiG COG0477 # Protein_GI_number: 16077893 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Bacillus subtilis # 26 535 24 465 482 313 38.0 5e-85 MTSRIEVAELVETTQPAGPKRRMGVVAAVATLGSLLFGYDTGVISGALPFMYLPHGAGGL ALTVGHEGAIGGTLTLGAAFGGLIGGMMSDRWGRRHNLLILAVLFVVGALGTAGAPSVWV MYPFRVVLGSAVGAASATVPVYLSETSPKRMRGRIVALDQFMIVFGQLLAFSVNAAISAA HGGPSLMVTADPTGRLSPGTYSWDTLQAMTTSHGGAMTDQAFHAFLTQLSVSAGSGGAWR WMLVVCTLPAIALWIGMRKMPESARWHLSHGQLRETVACLKQVRVEGVDEPIVDEVTEMV ELNGEGGRLSHRQQWAVVMESRWTRRLLLVGIFLAVVNQTTGVNTVMYYAPKVLEFAGMS TQASIISQVANGVMSVIGAAAGLWLIERFDRRHLLIFDVTAVGVCLLGIAATFGLAIAPH VGQGVPKWAPILVLVLMSIFMLIVQSTNGTVVWTMLGEMFPTRMRGAMNGAAVFCGWLAN ATITWTFPAMLAGLGGAGTYLTYGLVNLMIALVLVKVMPETKGRSLEEIEVEMKQRYA >gi|302034478|gb|GL383157.1| GENE 600 616268 - 616474 91 68 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVQAALPDYSSKALYGQGPVAQGIEQWFPKPCVVGSNPIGAAVQTASDRGNPPQSRFPGR IELYWTAP >gi|302034478|gb|GL383157.1| GENE 601 616578 - 616832 122 84 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313831952|gb|EFS69666.1| ## NR: gi|313831952|gb|EFS69666.1| conserved domain protein [Propionibacterium acnes HL007PA1] # 27 84 1 58 58 84 96.0 2e-15 MATGSTPASVIFWRAAASPSSLILAPLRVNERRHCTEKMYREEPTDRPEHATTSSVRQVA RTTSSSADRDNLPSPTRVKTGYSG >gi|302034478|gb|GL383157.1| GENE 602 616765 - 618162 1338 465 aa, chain + ## HITS:1 COG:SPCC1322.04 KEGG:ns NR:ns ## COG: SPCC1322.04 COG4284 # Protein_GI_number: 19075632 # Func_class: G Carbohydrate transport and metabolism # Function: UDP-glucose pyrophosphorylase # Organism: Schizosaccharomyces pombe # 69 461 107 497 506 251 37.0 2e-66 MSEEGLAAARQKMTEAGVDPVAIEVFTSYYHQLETGDTGLIREDTISPLTNPPMLDDVEV SEEQAAEALDKTVIIKLNGGLGTSMGLDRAKSLLEVRDGKSFLDIIATQVLSARKTFGAR LPLMFMNSFNTREDTLKALEKYPELAVDGLELDFLQDQEPKLDAETLAPVEWPKDSSLEW CPPGHGDLYTALLGSGVLDHLLEAGYQYASVSNGDNLGAVPDGRLAGWFAASGAPYAAEL CRRTINDKKGGHLAIRKSDDQLILRDTAQTAEEEMDYFTDEHRHPFFHTNNLWFDLEALK KVLDERHGVMGLQIIRNEKTVDPKDSSSTPVIQIESAMGGAIEVFEGATCICVHRSRFLP VKTTNELLLLRSDVYDLDDSDHLVKTTDMTCAVDLDKDFYKKIGDFDDRIPEPPSLRRAT SLKVKGDWTFGSEVVVAGDVSLDTEKPQTIPDGTVLTGEVLGAKK >gi|302034478|gb|GL383157.1| GENE 603 618189 - 618530 99 113 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3535 NR:ns ## KEGG: HMPREF0675_3535 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 113 1 113 113 202 100.0 4e-51 MAAVLTGQRLTAPDNPGWQAVDVVEWLAEEGWPANRLANRRAEFQQAGRSWPGPIPDDLS PGLEFARYGAVLAQARRIAGLDGLTATVHRGAVVIGPDEARLLAERPPHSLLH >gi|302034478|gb|GL383157.1| GENE 604 618553 - 618921 487 122 aa, chain - ## HITS:1 COG:DR2422 KEGG:ns NR:ns ## COG: DR2422 COG1970 # Protein_GI_number: 15807411 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Large-conductance mechanosensitive channel # Organism: Deinococcus radiodurans # 1 121 2 128 128 86 37.0 1e-17 MKGFKDFLMRGNLIELAVAFILGGAFSTVVKSFTTIIMDLIGKLGGTPNFSGWVPGGVHV GAFITDVISFFVMSFVIYFGLIKPIELATEKLKRTKDEPVAAPTTADLLIEIRDELRSRP VK >gi|302034478|gb|GL383157.1| GENE 605 619022 - 619597 277 191 aa, chain - ## HITS:1 COG:no KEGG:PPA0492 NR:ns ## KEGG: PPA0492 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 191 29 219 219 259 99.0 6e-68 MVARHRRGLAALLAALAVLLVASPGMATSSSGREVIVAAHAIEGGRVIQRSDLHTVRIDP GVLPHETATLAQVEGRQASIRITEGTILTSSAVLSGSAVGSGKALVGIHLADSSMVGMLQ VGQRVSVVSPSEDGTPHVLTRGAIIRSLPTSGGGLIQGSPSTELVVVSTGSADAAAIAVA GQGQPLGLVVE >gi|302034478|gb|GL383157.1| GENE 606 619758 - 620060 161 100 aa, chain - ## HITS:1 COG:MT1020 KEGG:ns NR:ns ## COG: MT1020 COG2331 # Protein_GI_number: 15840416 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mycobacterium tuberculosis CDC1551 # 1 61 8 68 117 72 55.0 3e-13 MPTYQYQCNDCGRDLEVVQRFSDPSLTICPSCEGDLRKVFSAVGVVFKGSGFYSTDNHTK GASKAATGDSSSPTASEPSTKSEPASSSSSSTAKASESAS >gi|302034478|gb|GL383157.1| GENE 607 620138 - 620647 367 169 aa, chain - ## HITS:1 COG:ML0181 KEGG:ns NR:ns ## COG: ML0181 COG0212 # Protein_GI_number: 15826993 # Func_class: H Coenzyme transport and metabolism # Function: 5-formyltetrahydrofolate cyclo-ligase # Organism: Mycobacterium leprae # 18 161 43 186 197 88 37.0 5e-18 MSRDDRRTEHAMSRLLWAHKVALYLSRGDEPDTVDLADTLIMMGKKVLAPVLTDGHGRSL HEPAWAWYDSKNVRTGLWQIPEPIAPILPASAIDQVEVVLCSALFVDRSGYRVGVGGGWY DRVLAHRADDVPVWAVVNDDEILDEVPHDPWDESVTAALTPSGLHMLGQ >gi|302034478|gb|GL383157.1| GENE 608 620835 - 622142 501 435 aa, chain + ## HITS:1 COG:PM0694 KEGG:ns NR:ns ## COG: PM0694 COG0303 # Protein_GI_number: 15602559 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin biosynthesis enzyme # Organism: Pasteurella multocida # 44 355 20 318 406 103 28.0 1e-21 MALFHRKKQVEAPEPEAEPLGLPGAPETDMSGRRSVDDHRDYLCSLVQAVPPVAVEVPRA VGLAVCEDVHAPHDVPVVTTAVIDGYALDSASTRMAGRPDAVEIQVDRRPPSPVIPGTAV RVMAGSLLPEGTDCVLPPDLLNVDGDIVLFSPVKRWAGARLAGSDYGRGEVLVRNGTILH PGIISVLASAGIDEVFVRPRPKVVIVAVRADEDQRAEIERKARANGAEDIASLDATAAAI ESATRALDVNVTVVSTNTSSDSELTRLLANAGRGADLVIATSDRIVVGQQDPVPSVLPPM GGTDFARVAMEPGANQVFALIDPGLVPLIVLPVGPGPALVSFMAFVQPLLRKLSGLPPVE ELKAETDRPIARHPESTTFVPVRLARVGGRPVLSRAGMGDVTHVVDLSMADAIAVVGAGD EPVPTGMPLTCWRLG >gi|302034478|gb|GL383157.1| GENE 609 622204 - 622854 420 216 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849629|ref|ZP_04469689.1| acetyltransferase, ribosomal protein N-acetylase [Streptosporangium roseum DSM 43021] # 1 197 1 186 206 166 45 2e-39 MTMQAGGVVLRPMRRADEARWTTTRELDCDWLGPWEATKPPGSHERVGGYRMMITRNRRR AKEGTFLPWAIGWDDGWPDRPALNRDTTPLIGQLTVSSISLGSAMSCSMGYWVASAYAGR GVAPTAVALACDYVFQVMGLHRVEICVRPENTKSLRVVEKLGLAEEGMRPAYLHIDGQWR DHRVFRLLTDDYPDGVLRNYLVNHLLPGFALEEDEG >gi|302034478|gb|GL383157.1| GENE 610 622927 - 623730 450 267 aa, chain + ## HITS:1 COG:no KEGG:PPA0496 NR:ns ## KEGG: PPA0496 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 267 1 267 267 486 100.0 1e-136 MSFVQALQAVLIAIVLVGWIAYLVPMVVNRRRSQEVTDDKHEDFPDTMSVVSRGSCTVTP NDTDENPRVELSTPYTRSYARWDLRRSWAVAARRRMTTMLVLLGLTALAMVLAITDVTPW WLVAIFVLLLVGFFALARWSVVAMAKRFDRRYALIDKGWDEDTVELEVGTEPFRAEDEPT SWTIDLDRPVTAPEGSLWDDVVVTAPTYVSTPLGARTVRTIDLSAPGPVPGQVDTPVVAE KPVERSDGEHVAEAHEGPSGIVGVASA >gi|302034478|gb|GL383157.1| GENE 611 624007 - 624210 124 67 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTHILIRLAARCPRLITRTLILRTPRDDHAGKLYPYRPCSGYFYHFRLPRPTVYACQRRF TTEQLAS >gi|302034478|gb|GL383157.1| GENE 612 624469 - 625146 418 225 aa, chain - ## HITS:1 COG:HI1044 KEGG:ns NR:ns ## COG: HI1044 COG3381 # Protein_GI_number: 16272976 # Func_class: R General function prediction only # Function: Uncharacterized component of anaerobic dehydrogenases # Organism: Haemophilus influenzae # 14 217 1 188 203 58 25.0 8e-09 MSPEQVTEPVTGSLDDELDQFAAVFTILGSLHYQVPDADHLHELLQMIDEWPLSRPRSPS RMEEGLQMWRLSREEAESRQVVVADHDRLYGDSAVALVPPYESAHRNREGLVFDEHTLQV RAAYARLGLAAPHLHREPDDHIGLELEFLAQGCLRVLDAREDGHADESHQTLAIVANFLR THVLAWAPSFLSRVSEQAQTSFMKGVALLTIATLDEFDRCLDSVT >gi|302034478|gb|GL383157.1| GENE 613 625143 - 625628 404 161 aa, chain - ## HITS:1 COG:PA3918 KEGG:ns NR:ns ## COG: PA3918 COG0315 # Protein_GI_number: 15599113 # Func_class: H Coenzyme transport and metabolism # Function: Molybdenum cofactor biosynthesis enzyme # Organism: Pseudomonas aeruginosa # 6 160 2 157 160 132 51.0 2e-31 MTSNPFTHLRGNGSAHMVDVTTKTPTVRVATAECCVVCSEPIMTALRDESVPKGDVLAVA RIAGIQATKHTPDLIPLAHRIGVHGAEVDLWLEPDRVRIRATTRTTDLTGVEMEALTAVT VAALTVADMVKGVDRGFAIEHAVITHKAGGRSGEWTRSDDQ >gi|302034478|gb|GL383157.1| GENE 614 625594 - 626736 598 380 aa, chain - ## HITS:1 COG:MT0454 KEGG:ns NR:ns ## COG: MT0454 COG0303 # Protein_GI_number: 15839826 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin biosynthesis enzyme # Organism: Mycobacterium tuberculosis CDC1551 # 1 296 51 352 405 159 43.0 6e-39 MDGFAVRHADVSEATVHTPVTLPVTNDVPAGSPAHRPLDPGTAQRIMTGARMPENADTVI KVEDTDHAPGTVDAPATVTIFRTPSTGANVRRRGEALATGATVLPAGRRLTPEALAAAAA VGHGSLRVHPAPRVGVLATGSELGGAGEPLHRGKIPDSNGIMLGGLVRTHGGVVEQTRVP DDPERLRELVRSWRVDLIVTAGGISMGAYEVVRQGLPELTFHHVAQQPGGPQGAGMVAET PVLALPGNPVGAYVSFHVYVAPLLARLRGLSPDLIDATPAGVTAPIDPLLGRRLVRARAG APWRSPAAKTQFMPVCWNGENVEPVHALGSKSHLVTSLPLVEGLAVAGPGIDHVDSGDEL SILLTGGVTHDLKPIHPPAW >gi|302034478|gb|GL383157.1| GENE 615 626925 - 627347 229 140 aa, chain - ## HITS:1 COG:MT0889 KEGG:ns NR:ns ## COG: MT0889 COG0314 # Protein_GI_number: 15840279 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin converting factor, large subunit # Organism: Mycobacterium tuberculosis CDC1551 # 1 134 5 139 141 106 45.0 1e-23 MHAKISGEPLNVAKVVSLVSDDRSGAVVTFTGVVRNHDGGQSITAIDYSAHPHATQILAD LVEQCATRDGVHGVAAEHRIGHVEVGGTAMVVAVSADHRGQAFEAACEFVDAVKESLPVW KCQWLTDGSHEWAGLPGEEP >gi|302034478|gb|GL383157.1| GENE 616 627348 - 627587 253 79 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3548 NR:ns ## KEGG: HMPREF0675_3548 # Name: not_defined # Def: ThiS family protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 79 1 79 79 145 100.0 4e-34 MQVHYYGGTAEAAGTSEETVETPTGLSVNQLLDHLRNLHPGLGRLLGVCTLFVDGSAVRG EQIVPARAQVEVLPPFAGG >gi|302034478|gb|GL383157.1| GENE 617 627590 - 628630 505 346 aa, chain - ## HITS:1 COG:Cgl1171 KEGG:ns NR:ns ## COG: Cgl1171 COG2896 # Protein_GI_number: 19552421 # Func_class: H Coenzyme transport and metabolism # Function: Molybdenum cofactor biosynthesis enzyme # Organism: Corynebacterium glutamicum # 14 346 2 337 337 340 53.0 3e-93 MSAATGQSAAHHGLPDRFGRLATDLRVSVTDHCNLRCTYCMPAEGMDWLANRDLLTDDEI IRVIGIGIERLGITKVRFTGGEPLLRPSLENLVAATSTLRRTNGTPPITALTTNGIGLDR RVDGLVEAGLDRVNISLDTVDRERFATISRRDRLADVVTGIDAALAARLLVKINAVPQID SYRRDIPELLVFCLDRGLELRFIEFMPIGANGWKREATVSADDILTVVRDAGFSITADQA ARGSSPAQRWSVSSRHTRPGWLGIIASVTRPFCANCSRTRLTADGQIRNCLFADQEADLR SLLRSGASDDEIIAVWQGEMWCKSAHHGVDNGSFANSRRRMSAIGG >gi|302034478|gb|GL383157.1| GENE 618 628535 - 628732 79 65 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3549 NR:ns ## KEGG: HMPREF0675_3549 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 21 65 1 45 45 88 100.0 8e-17 MVGYRDPQVGSQPSETVRQTMVGGTLARRGAHDLTVLPVCLWCGHVIANVAELLSTRGYT SALYR >gi|302034478|gb|GL383157.1| GENE 619 628873 - 629301 336 142 aa, chain + ## HITS:1 COG:no KEGG:PPA0503 NR:ns ## KEGG: PPA0503 # Name: not_defined # Def: putative molybdopterin-binding protein # Organism: P.acnes # Pathway: not_defined # 1 142 1 142 142 229 100.0 4e-59 MSIMSPHPPSHRVSDVAALLGVSDDTVRRWIDQRHVRAAKDTTGRLRVDGASLAAFLVTQ QQERQDLADGAQTQSMRNHIRGIVAKVISDKVMSQVELVTGNLSIVSLVSTEAVRELGLQ VGSIAVAQVKATNVSLQLPVTR >gi|302034478|gb|GL383157.1| GENE 620 629307 - 630077 485 256 aa, chain + ## HITS:1 COG:MT1905 KEGG:ns NR:ns ## COG: MT1905 COG0725 # Protein_GI_number: 15841325 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, periplasmic component # Organism: Mycobacterium tuberculosis CDC1551 # 1 256 1 261 261 167 41.0 3e-41 MSRVSLRTCAIAAVAAVLLAACGSGPSSTQPSAAPTRLTVFAAASLTRSYEQIGEQFERK YPRVDVQFSFEGSQNLVAQMAQGAPADVLATADQRSMNKAVEQNLVNVPRQFASNVLTLV TPAHNPARVTGLNSSLRGAKLVICAPEVPCGNATRKLANKLGVTLKPVSEEQKVTDVRGK VESGEADVGIVYRTDALAAGKKVDVIPIGRANEVVNHYPIATAVGATHQGLAKRFVEYVM SADAQKILSDDGFSGP >gi|302034478|gb|GL383157.1| GENE 621 629957 - 630196 87 79 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVPCTAPLHSFIAPRCLPGNRPCPLRRAIGTGTGLSLHTYHGPENPSSERIFWASADITY STNLLARPWWVAPTAVAIG >gi|302034478|gb|GL383157.1| GENE 622 630237 - 632015 284 592 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 357 566 20 231 245 114 34 1e-23 MPMWIVILAVVGICVLVLPLVGMGNEVPWARIPAIMASPEAQDALWLSVRTCVIATVIDV FLGVPIALLLVRDWNGVAAVRVLVLLPLSLPPVVAGLALLATFGRRGMIGASLHAAGISI AFSTAAVVMAQVYVSLPFLVTALESSIRTRSWKLEQTAAALGAGPWRVLRTITMPTVASA LGRGTALAAARCLGEFGATITFAGSLQSVTRTMPLQVYLARETDSDTAMALGLVLVVVGA IVAGLTQWQPSQRSWRRNEPPLVEEGLTGQGNYELAGTRGTPYEQHVCEQSDPGKDLPEQ SSITTNLGTSAVTVWSPQAHDDSVSRVRGASAGHEPIGSAAAAIHVDGQVSARSWDVRLD VEPGEVVAVMGPNGAGKSTLASVVTGLLALDRGRVCIGRQLVDAGDGRIVLPGRRGVGLL TQDALIFEHMSVLDNVAYGPRCHGLSRAQAQKVAYAQLAAVGCAHLAARRGGELSGGQAA LVGLARAFAVEPAVLVLDEPTAALDIDAQIRVRDLLKSQLDRTNMTALIITHDVADTMTV AGRLVVLEHGRIIEDGVVSQLLENPKKAFTAQLAALVKFGVRTNSQGAESSS >gi|302034478|gb|GL383157.1| GENE 623 631949 - 632668 175 239 aa, chain - ## HITS:1 COG:no KEGG:PPA0506 NR:ns ## KEGG: PPA0506 # Name: not_defined # Def: putative regulator # Organism: P.acnes # Pathway: not_defined # 34 239 1 206 206 393 98.0 1e-108 MSGQGIGEILTTIASLTPAQQSVLKKVSLHAGPVTITDLARESKLHVNTIREPLNVLVSL GLVEREKLPAAGRGRPYWGYTSRTLSGPNSPADLLRHLSRSTIRWIRDTSDDPVAAARSL GEHLGDDALAMANVPDHTEHSPSDKFSVADHMTKIRVFLTAFGFSAEPHPTNPTALILRA CPFVHPNDTDPVAMAIQQGMLYRVIERTGGNSVHVTLHHEEDSAPCELVLTPNFTNAAS >gi|302034478|gb|GL383157.1| GENE 624 632670 - 633383 316 237 aa, chain - ## HITS:1 COG:Cgl1160 KEGG:ns NR:ns ## COG: Cgl1160 COG2181 # Protein_GI_number: 19552410 # Func_class: C Energy production and conversion # Function: Nitrate reductase gamma subunit # Organism: Corynebacterium glutamicum # 2 237 3 240 259 228 48.0 5e-60 MNTNLLVWLVLPYLSIILLIGGMIWRYRTDQFGWTSRSSQWNEPSILRWSSPLFHFGILF VFLGHVLGLVIPQSWTSTIGITEDTYHVMATVLGSAAGLAALVGLLGLLYRRFMTKSVRL TTTTMDIVTYVLLTLTVTLGCWATVHQQMIVGGYNYRDTIGPWFRSIALFQPRPELMATV PLDYKLHVMAGMVLFSVWPFTRLVHVVSAPVSYPTRPYVIYRSKNGHLGSSSRHYGW >gi|302034478|gb|GL383157.1| GENE 625 633380 - 634051 372 223 aa, chain - ## HITS:1 COG:Cgl1161 KEGG:ns NR:ns ## COG: Cgl1161 COG2180 # Protein_GI_number: 19552411 # Func_class: C Energy production and conversion # Function: Nitrate reductase delta subunit # Organism: Corynebacterium glutamicum # 8 218 14 222 228 172 45.0 3e-43 MGVFLGAPRIPVSTHVDASLAQRRVVHMATSLLLDYPDEQLTQIITAVRHDRDLMPAVVA DEITAFCGVAESWGLRALQEHYVETFDQHRRCALYLSYYSAGDTRERGAAILGFREVMRS AGFELDHANELPDYLPVVLEFSARASEGDTLLRANREALEVIRSALVTASSPYAHLLEGL CLILSPLDKKTLARYQKLISQGPPVEMVGLAATDPVSTLGRQL >gi|302034478|gb|GL383157.1| GENE 626 634053 - 635576 804 507 aa, chain - ## HITS:1 COG:Cgl1162 KEGG:ns NR:ns ## COG: Cgl1162 COG1140 # Protein_GI_number: 19552412 # Func_class: C Energy production and conversion # Function: Nitrate reductase beta subunit # Organism: Corynebacterium glutamicum # 1 474 1 475 531 768 75.0 0 MKVMAQIAMVMNLDKCIGCHTCSVTCKQAWTNREGTEYMWFNNVETRPGVGYPRGWEDQE RWRGGWKRTRSGKLVPYQGGRLATLGKIFANPNLPAKKDYYEPWTYEYDQLLASPSTQHI PTARAKSALTGEHKDTIDWGPNWDDDLGGSMETLDQDPVLHQMNLTVRKSIEDSFMFYLP RICEHCLNPTCVSACPSGAIYKRAEDGIVLVDQDHCRGWRMCVSGCPYKKVFFNHHSGKA EKCTLCYPRLEVGQPTVCSETCVGRLRYLGVLLYDADHVTWAASQPDPRTLYAAQRDILL NPNDPEIITQAKANGVPHSWIKAAQASPVWQLISRYQIALPLHPEYRTLPMVWYVPPLSP VVDAVSASGNDGEDHRVLLAAISQMRIPLEYLAGLFTAGATAPVELSLRRLAAMRSYMRD IFLGNEADETIPEAVDMTGEDIQSMYRLLSIAKYDDRYVIPTTCSGLPDGIADLGRCPVS GSLEAFHSISSPVSAPEGTPTLPLEVI >gi|302034478|gb|GL383157.1| GENE 627 635576 - 639313 2340 1245 aa, chain - ## HITS:1 COG:Cgl1163 KEGG:ns NR:ns ## COG: Cgl1163 COG5013 # Protein_GI_number: 19552413 # Func_class: C Energy production and conversion # Function: Nitrate reductase alpha subunit # Organism: Corynebacterium glutamicum # 18 1245 17 1248 1248 1563 62.0 0 MTEYDETSDAESPSGSALLKMGTWLRRGTTSPDTRQLFLEGGRDADVFYRKCWSHDKVVR STHGVNCTGSCSWKIYVKEGIITWESQQTDYPSTGPDMPDYEPRGCPRGASFSWYEYSPT RIRHPYVRSVLLDAWRDKLAEFGDPVDAWASITNDPELSQAYKCARGHGGMVRVSWEEAT QIIAAAYVHTIKAYGPDRIAGFSVIPAMSMVSYGAGSRFTELLGGTMLSFYDWYADLPPA SPQVFGDQTDVPEAGDWFNSQYLIMWGSNVPVTRTPDAHFMTEARYHGQKVVVVSPDYAD NTKFADEWLRVASGTDGALAMAMGHVILSEFHVTRREPMFLDYMRRYTDSPFLVELDRFD GPQADGAAYVPGKFLTADKVNLQTRPDHPEFRPLVMEADGSLKDPGGTLADRFSESGVGH WNLDLDGVNPVMSMMDVNSWEAVEIALPRFDLPSSPDQTSLGAGIVHRGVPARRIGDRLV TTVYDLLLAQYAVSREGLPGQWPSGYDDPTVPGTPAWQAELTGVPAAAAERIGREFALNS LETGGRSMIVMGAGVNHFYHADEIYRTFLALTNMCATQGVNGGGWAHYVGQEKVRPFTGW ANYSFALDWARPARQMIATAWYYLTTDQWRYDGARAESIASPLGSGSFAGRTTADCMVYS ARRGWTPSYPTFTRNPLDLADEAAAAGMEPAEYIAQKLTDGSLGFACEDPDATQNYPRLL ANWRTNLLGSSAKGTEFFMKHMLGCENDVNATELTEGKRPTDIRWRDDTPPGKLDLMWTA DFRNTSTTLHSDVVLPAATWYEKHDLSSTDMHPYVHSFNPAVDPPWEARTDFEVFRTLAY SVSQMAVKHLGTRTDIVAAPLMHDTPDEMTTPAGSVSREQEAWIPGVTMPKLVTVERDYT QIGAKFDTLGPLTESLGMVTKGVPFHPDPEVADLAQRHGVATSGPGAGRPLLDTAIKACD TILATSGTTNGRLATAGFEQLEARTGTKLTDLSVGSQDRRVTFTDTVIQPQPVITSPEWS GSEHGGRRYSAFVINMERHKPWHTLTGRMHYYLDHDWMRDMGESLPIFRPPLDVAHIYDE PPAGYTGTDADGAAVVSVRYMTPHNKWGIHSQYYDNLHMLTLARGGQTIWMSPADAAKIG VSDNDWVEAYNRNGTVDARAIVSHRIPEGTVFMYHGQERTVNTPLTERSGKRGGTHNSLT RILLKPSHFIGGYAQLSYAFNYYGPTGNQRDEVTLIRRRGQEVTF >gi|302034478|gb|GL383157.1| GENE 628 639371 - 640741 971 456 aa, chain - ## HITS:1 COG:Cgl1164 KEGG:ns NR:ns ## COG: Cgl1164 COG2223 # Protein_GI_number: 19552414 # Func_class: P Inorganic ion transport and metabolism # Function: Nitrate/nitrite transporter # Organism: Corynebacterium glutamicum # 27 456 10 445 445 510 65.0 1e-144 MIFSDNIRVNCTIPRGDIVSTSPSHHLIENWDPEENWDSGIAWRTLTISTFSMIIAFCVW FLVSAIAPKLNAIGFHLTKSQLYWLTAMPGLSGGFIRLVYMFLPPVIGTRRLVGYSSLLY LIPMLGWFFAVQNTSTGYGTLLLLAFLCGVGGGSFSGYMPSTGYFFPKSKQGTALGVQAG IGNLGMSIVQLLGPWLMGFGLLGLTWIAPQHTAGSPLWVHNIAIVFVPWTILATILAFTM LKDVPVKANFRRQIDIFTNPDTWIMTLMYVMTFGLFSGFSAQFGLLIENTYGNSSNLAHG FSNLPAGASYAFLGPLIGSLVRVVWGPLCDRFGGAIWTLVSGIGMALTFGFCAFFLNPTS PSQFGYFLWGMLTMFFFSGIGNAGTFKQMPMIMPARQAGGAIGFTAAIGCFGPFVVGVAL SSMSAVAWFWICTVFCIVCSIICWIRYARPGAPCPG >gi|302034478|gb|GL383157.1| GENE 629 640664 - 641548 300 294 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3558 NR:ns ## KEGG: HMPREF0675_3558 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 2 294 1 293 293 564 99.0 1e-159 MVGRACAHNVSAWDRAINTDIIRKNHRREGRPALCPNAGVATSRGLLFLAGRIVGTLRRC VGWSYWSETLVKSVAGGLLRIGMRHDHDMTNRRLDAVILAGGCAHRLGGVAKANLRVGTR RLLDVVLDAVDGAREGLEGSNVVVARESVEVPWSVIRTMEDPPGSGPLAGIRAGLQALPP AQPDDLVLVCAVDSPGIGRSIRQLREALEDDPLNHFAGAVTFGGVPKPHRQLLQGLYRRV PLEASIAAADTVVNRSVHSVLGGLCLLDLPVEPEACRDLDTPGDVEWWLRHIGD >gi|302034478|gb|GL383157.1| GENE 630 641844 - 642344 199 166 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|134277849|ref|ZP_01764564.1| ribosomal protein S16 [Burkholderia pseudomallei 305] # 8 147 4 143 194 81 34 8e-14 MDEIRARVITVSDRCAAGAALDRSGPLAASLLAELGCSWLKVDPVTVVPDGIDSVGGALR DALENGCRLVVTTGGTGISPRDLTPEATQPLLVARLDGLAEQVRALGAHGSALAGLSRGL VGVTSRGDQAALIINAPGSTGGVRDTLTVIGPMLEHIFRQLAGGGH >gi|302034478|gb|GL383157.1| GENE 631 642514 - 642789 220 91 aa, chain + ## HITS:1 COG:no KEGG:PPA0514 NR:ns ## KEGG: PPA0514 # Name: not_defined # Def: putative molybdopterin-guanine dinucleotide biosynthesis protein # Organism: P.acnes # Pathway: not_defined # 1 91 1 91 91 164 100.0 7e-40 MSHHDDNPEKMARMRDWLEIAAREVDVDPSVLTDVEQPLLDMVSVISHGPSRPGAPLTAF LVGIATAQGGDTLQLVKKLMQAAEQRGQTRD >gi|302034478|gb|GL383157.1| GENE 632 642853 - 643863 760 336 aa, chain - ## HITS:1 COG:ECs0981 KEGG:ns NR:ns ## COG: ECs0981 COG3302 # Protein_GI_number: 15830235 # Func_class: R General function prediction only # Function: DMSO reductase anchor subunit # Organism: Escherichia coli O157:H7 # 4 163 6 161 287 71 30.0 3e-12 MNTHDVPMILFTVVTQMCVGAFLVLGTAHVGAAIRGRENSVVERTSRPVLYAIGPAMVFG LFVSMFHMGYPAHTLNVLRHPQTSWLSREIMFGSGFALLGFVFAMLSWFKRPAFAIQRVL AVVTAIVGIGLLVCESMIYYSLVTVPAWHSWWVPFSFAATTIILGTLSVACALMITAMVR HRHETAVPSAREKHPKTTGWWSRHVTEEIRAINAPTDDQEWDLSLTVTKWCSIGAAVVSV ALMVGYPLYTSQLASGGPVAHQASNTFSGGIYATRLILLGAIALMLGSFVYRGALHTPRE HPHSLGWLLITTLIITFAGEIVGRALHYWSLVRIGI >gi|302034478|gb|GL383157.1| GENE 633 643863 - 644504 415 213 aa, chain - ## HITS:1 COG:dmsB KEGG:ns NR:ns ## COG: dmsB COG0437 # Protein_GI_number: 16128862 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Escherichia coli K12 # 12 213 4 205 205 227 53.0 1e-59 MGEKNYTAKGAKYGFFFDQTLCTGCKACQIACIDKHDLPTGVRWRRVVEYSGGTWQISGD TFNPSVFTYYTSVSCNHCEDPICMKACPTTAMSRRDDGTVYVDQDKCVGCRYCEWACPYS APQYRKDTGRMSKCDLCYDYRSKGKEPACVAACPSRALDWGPIDELRSTYGNEDAIAPLP DPSVTKPHLVITAHRDAQRWDEGTGEIANTKEI >gi|302034478|gb|GL383157.1| GENE 634 644671 - 646668 1339 665 aa, chain - ## HITS:1 COG:ECs0979 KEGG:ns NR:ns ## COG: ECs0979 COG0243 # Protein_GI_number: 15830233 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli O157:H7 # 1 664 162 784 785 612 47.0 1e-175 MNTWGGYLDHYSDYSTTEITQAYPYFYGSWVGSNSFDDVKNSKLQVMFGNNPAETRMSGG GQVFVSQQTRKASGVRTIVIDPRYSETAITMADEWIPIRPGTDAALVAGLIHTMITEDLH NQAFLDRYCVGFDDKHLPEGTSAGSSYRAYLEGKGPDHTIKNAQWASHITGVPAERIRRL AREIAAANPCAITQGWGPQRHANGENSARAIFLLAAVTGNIGIPGGGTGAREGAQAFQFT LPFNTEITNTKSNKIIPVFSWLDAIDHGEQMDTFNSGVCEKPAPGVRANKVPIDEHGKPT NVKLSAPIKMVWQYAGNSLVGQTGNNNRSVEILRDDSKCELIVVCDIQYTTSARYADYVL PGTSTAEEEDIHPGENGGPMAYGIVSSQAIKPLYECRNIFDICAGLAKRLGTEKEFTGGL TRSQWLERTIEETRKKDPGLPTYREWKKIGIFRKDMGPYVELDEFRKDPVANPLETPSGK IEIYSERLAAMSEAWTFGTFRKKLAGDKLTALPEYVVTWEGPEEAKASKKYPFQVIGHHF KGRTHSSYGNVDWLLDAHPQTVWINTRDARAKGITNGDQVFVYNDRGTIRLPARVTDRIA PGVLSVPQGAWYRPLSNTKVAPPSKANPKQPVDINGAMNTLTSLHPSPLAKGNAVHTTIA NVEKA >gi|302034478|gb|GL383157.1| GENE 635 646705 - 647262 311 185 aa, chain - ## HITS:1 COG:HI1047 KEGG:ns NR:ns ## COG: HI1047 COG0243 # Protein_GI_number: 16272979 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Haemophilus influenzae # 26 185 8 168 806 155 50.0 4e-38 MTYRMSGGLNVESYSTNIPGLKTKASRREFMKWSAVVGGTAALAPVLHETKDALANKPTN DASTFVWSACTVNCGSRCPLRLEVKDGTIVRVLPDDTANNKVGSQQVRACVRGRSIRHRI YNPDRLKKPMKRKPGTKRGDEQWVTISWDQALDEIAEKMKKIKARYGNEAFYINYGTGTL GSVMA >gi|302034478|gb|GL383157.1| GENE 636 647686 - 648513 571 275 aa, chain - ## HITS:1 COG:MT3198_1 KEGG:ns NR:ns ## COG: MT3198_1 COG0476 # Protein_GI_number: 15842687 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 # Organism: Mycobacterium tuberculosis CDC1551 # 20 272 10 262 274 249 50.0 3e-66 MDDAVSRATNGHDAVEDMGSTTSLINRDLIRYARHIVLPGFGQEAQRRLRDSRVLVVGAG GLGSPVLLYLSAAGVGYLTILDDDVVDESNLQRQVIHRQADVGRPKALSAKDAVQRLNPH LVAEAVVARLGTDNALDLVKDHDLILDCTDNFTTRYLASDAAEITGTPLVWGTILQYQGQ LSVFWPDRGPMLRDLFPEVPAADSVPSAVVGGTFGPVVGQVGSMMATEAVKVLTGIGTPA VGKLVVVDALGVGARTLSFAADPDRASVTQLPEAE >gi|302034478|gb|GL383157.1| GENE 637 648528 - 649361 527 277 aa, chain - ## HITS:1 COG:Cgl1993 KEGG:ns NR:ns ## COG: Cgl1993 COG2022 # Protein_GI_number: 19553243 # Func_class: H Coenzyme transport and metabolism # Function: Uncharacterized enzyme of thiazole biosynthesis # Organism: Corynebacterium glutamicum # 15 265 2 254 260 297 67.0 2e-80 MSCDEKAATSSDEPLRIGGLRLTSRLIMGTGGSTSMDTLERALVASGTQLTTVAMRRFAA GPRQSVFEILQRHRITALPNTAGCYTARDAILTANLAREALDTNLVKLEVIADEDTLLPD PVELVNAAEQLVANDFVVLAYTNDDPAIAKRLEDLGCAAVMPAGAPIGTGLGILNPHNIE LIVDRANVPVILDAGIGTASEATLAMELGCDAVLLASAVTRAHNPVGMAQAMKMAVVAGR MARTSGRIPRRRLARASSPFDGIITGRVRGPRENDSL >gi|302034478|gb|GL383157.1| GENE 638 649403 - 649669 89 88 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3568 NR:ns ## KEGG: HMPREF0675_3568 # Name: thiS # Def: thiamine biosynthesis protein ThiS # Organism: P.acnes_SK137 # Pathway: Sulfur relay system [PATH:pak04122] # 1 88 2 89 89 144 98.0 1e-33 MTANNGETTGHYPTTTVNGEPYDPSDNETILDLVSARIGKTLRADGRTVDGSPLGIAVAI NGAVIRRAQWAATPVRGVIDVVTAVQGG >gi|302034478|gb|GL383157.1| GENE 639 649679 - 650926 719 415 aa, chain - ## HITS:1 COG:Cgl1991 KEGG:ns NR:ns ## COG: Cgl1991 COG0665 # Protein_GI_number: 19553241 # Func_class: E Amino acid transport and metabolism # Function: Glycine/D-amino acid oxidases (deaminating) # Organism: Corynebacterium glutamicum # 54 411 15 371 374 245 41.0 1e-64 MGTAATRREFAGSTVVGHVDTKSHNHAAETSTIPPSERGRPSSVVIAGAGIIGLTTAWRL RRRGIEVTVLDDAPVSGASFAAAGMLAPVSEVIWDQPTLYPLMVESGRIYRDFAAAIAHD VGHDIGYLESSTFVCAGDSADRQTLNELLELQHRMGMTVNRISVSQARAAEPALGPGCVG VVDIPGDHQVDPRRLCGAILEFLGDRVVPTRASEVLFNEDHRAIGLRGANGKSYRADHVV LAAGVDTGAITGIPQALTDLLRPVRGEVLRLRVPEALRPLVTRTIRGVVQGNAVYIVPRA DGTIVLGATTREDDMVGVRAEGVHQLLRDAHRLVPGILDCEIYEMTAKARPGSPDDVPMV GRVGDGLTVSMGYFRHGILLAAIGSRIGADIVCGTEKDNNPALLAAVNPFRFGNR >gi|302034478|gb|GL383157.1| GENE 640 651308 - 651622 338 104 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3571 NR:ns ## KEGG: HMPREF0675_3571 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 104 1 104 104 199 100.0 3e-50 MDGHPERLGIIVEQSPNRTQIKRLVDPMNLDPLLAEDLAEGHQRPKLERHGEALFLVLHP PFYIDSIEDVAFVEAEVIKQRNCVVPTLIGSIYSMNFDNMPELH >gi|302034478|gb|GL383157.1| GENE 641 651882 - 653327 542 481 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 20 443 8 412 447 213 29 1e-53 MIWKLHNRGVLEPGEVVAPDERLGWGRTIGLGAQHVVAMFGATFVFPVLMGLNPQLAVMM SGVATLVFIFVTQHEVPSYLGSSAAFPGVATAIYASGGKPNDVSGALLCVGLTLLICGII IQAAGSRVVHKVLPPTVTGAVVMLIGFNLAPVVAKTYWPTDQWTALIVMLLVIALSVGPR GFVSRIAIFLALVIGYLLSWTEDLVFGPLHHSDGSTAPRVDWSAVHNSAWIGLPPATNLN NWQYLPQVHNGSHYASTNVVGFHLPAFHLAFILLALPVVIALIAENTGHVKAVAEMTGKN LDHQVGRAVAADGATSMLATFLGAGPTTTYSENIGVMAATRVYSTAAYVVAAVVAILFGF SPKFGAVISATPGGVLGGITVVLYGMIGLLGAKIWKENEVDFGNPVNLVPVAAGIIIGVG DVSLKFSKSFTLGGIALGTIVTVGVYHLARWLAPHELSDAAGGTNIILDAPGMYVDDDTP Q >gi|302034478|gb|GL383157.1| GENE 642 653410 - 654939 1021 509 aa, chain - ## HITS:1 COG:MT1031 KEGG:ns NR:ns ## COG: MT1031 COG1928 # Protein_GI_number: 15840430 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Dolichyl-phosphate-mannose--protein O-mannosyl transferase # Organism: Mycobacterium tuberculosis CDC1551 # 3 508 20 502 503 259 36.0 1e-68 MTDEYTSWIITALITTVAFVLRVWNVGFPNSLVFDETYYPKDAWTMLHQGYEATWPDAAK ANADIVRGITNTWTPDAEFVVHPPVGKWLIATGEQLFGFNSFGWRFSSVVFGSLLVLMTI RLARRLSRSTMVGAIAGILLTLDGLAFVMSRIGLLDIFQAFFLVAGVSAVAADRDWFRHR LADHLRTIGNPHLNGDFGPALGWRPWRLVAGIMFGLACGTKWNSMFVLATMGIVSVIWDW SARRLAGAGTKAWWSFLRDGVPAFVYLVVVALLTYLATWAKWLVTYPHMVFGKSWAGPAP SPGLSKVVGKPLAALWEYHRQIYDFHTGSYMMTQTHVYASNPSGWLVIQRPLGVDAVNGI KPGQQGCKAVGDTCLRVISATGTPVLWWFAAIALVAAVIWWIFARDWRFTLPIVAMMSTW IPWFRYDDRPLFFFYAICIIPFTVTILAIWLGQILGPAKASSRRRIGAIVVGTVMALVAA DFAFIYPILTDGLMTRKAWLARMWFHSWI >gi|302034478|gb|GL383157.1| GENE 643 654796 - 655914 781 372 aa, chain + ## HITS:1 COG:Cgl0866 KEGG:ns NR:ns ## COG: Cgl0866 COG0313 # Protein_GI_number: 19552116 # Func_class: R General function prediction only # Function: Predicted methyltransferases # Organism: Corynebacterium glutamicum # 92 364 9 279 282 229 49.0 7e-60 MEHRPGVLGVVGLIEDETVGESDVPYAQHECHGGDKGRDDPARVLVGHPTVVEAFDGRQG SSRCWHSAIVKGWSDVIVGSAWDDSSVSKTQPGRVILAGTPIGDRRSASPALIETLRDAR VIAAEDTRRLRDLLRRLGVESSARVVSYFEGNESARTPELINCLRDGDDVVVVTDAGMPS VSDPGYRLVTAAIEHGIVVTSVPGPTAVTTALAISGLPTDRFCFEGFLPRKPGERRRRLA ELAQEPRTTVLYEAPHRLADLLDDAADALGTDRRAAVCRELTKTYEEVRRGGLGELAEWA REHARGEITIVIEGAPGTVVGIDEAAEMVAELTADGIKRSKAVAQVARATGVDRHDLYDA AQNALTTDKEES >gi|302034478|gb|GL383157.1| GENE 644 655911 - 656819 559 302 aa, chain + ## HITS:1 COG:Rv1008 KEGG:ns NR:ns ## COG: Rv1008 COG0084 # Protein_GI_number: 15608148 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Mycobacterium tuberculosis H37Rv # 25 302 1 261 264 147 38.0 2e-35 MNEAIREVLGEAGAPPLPEPLAGSIVDSHTHLDTVQDVVGIEPAISLAAAREVGVTRIAQ IGCDVAGSEFAEELARTHKNVIAAVAIHPNDAARLGREKIGDALKRIDELASVGNHVRAI GETGIDHFGTTDADGQALQREVFAAHIAMAHAHDLTLAIHMRDARNGGEGDEPPSGRQAH DDVVDVLNSEGWPDRIIMHCYSGDADLARICLDHGAYLSFSGTITFNSAGPQRDALAIAP DNRILVETDAPFLTPAPRRGKRNGPYLLPHTARFIAKQRGWDELRVCQQLTENAFAAYGG AW >gi|302034478|gb|GL383157.1| GENE 645 656816 - 657712 634 298 aa, chain + ## HITS:1 COG:Cgl0886 KEGG:ns NR:ns ## COG: Cgl0886 COG0030 # Protein_GI_number: 19552136 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Dimethyladenosine transferase (rRNA methylation) # Organism: Corynebacterium glutamicum # 6 288 9 289 293 262 53.0 7e-70 MSETGLLNPASIRRIADQIGLRPTKTRGQNFVHDANTVRRIVSLAQVGAADRVIEVGPGL GSLTLGLLETGAEVVAIEIDEVLANQLPGTVAERMPGAAERLEVVLSDALDVKVIPGAEP TALVANLPYNVAVPVLLHMLAICPQWSTGVVMVQSEVADRLVAAPGSKIYGVPSAKLAWY AEAIRVGNVPPTVFWPVPNVDSGLVRITRRRPPHVDGRDPRVTRSQVFRVVDAAFASRRK MLRSALAGLCGGSMAASELITAAGIDPTARGEALDIGDLARVVEALAQAGALSDSGQV >gi|302034478|gb|GL383157.1| GENE 646 657745 - 658707 438 320 aa, chain + ## HITS:1 COG:MT1040 KEGG:ns NR:ns ## COG: MT1040 COG1947 # Protein_GI_number: 15840439 # Func_class: I Lipid transport and metabolism # Function: 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase # Organism: Mycobacterium tuberculosis CDC1551 # 12 315 5 303 306 226 48.0 4e-59 MDDPFDLLRPMTVTVRVSAKVNLALGVGGLAPDGFHPLATVFEAICIYDEVAVTRRDDSR ITLTVSGEDADQVPTDETNLAWRAVELVREEFASEWGKRGHGADIHIDKSIPVAGGMAGG SADAAGALMAAAALCRLPYSPEELQPLAAQLGSDVPFCLTGGVALGRGRGDRLAPVICRG RHRWVFATSNQGLSTPAVYRRFDELGGTPGGETVPNDLISALTRGDLDAVAASLSNDLQA AAIDLRPELEEVLTVGREVGALTALVSGSGPTCAFLVRDTAGAKKVSAAVSNLPQVHRTR TARGPAAGAQLLPGPVGSFA >gi|302034478|gb|GL383157.1| GENE 647 658704 - 659243 365 179 aa, chain + ## HITS:1 COG:SMc00380 KEGG:ns NR:ns ## COG: SMc00380 COG1846 # Protein_GI_number: 15964053 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Sinorhizobium meliloti # 18 173 6 161 164 115 45.0 4e-26 MTRPLHQNAVHQNSPRKDAVDGIIAAWARERPDLPVEVMEVWSRVTRLARRLDRDRAKAF SQWDLEGWEFDVLAALRRSGEPYQLSPGQLLNELEVASGTMTNRITRLSNRGLVRRLPHP KDGRGVIVELTDEGRDRVDGALAALLESEGRLFDSMDAQVVEQVGQGLRAVLARQEELD >gi|302034478|gb|GL383157.1| GENE 648 659225 - 659857 456 210 aa, chain - ## HITS:1 COG:Rv1019 KEGG:ns NR:ns ## COG: Rv1019 COG1309 # Protein_GI_number: 15608159 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mycobacterium tuberculosis H37Rv # 1 196 1 194 197 201 54.0 7e-52 MTSGQRREQLISVARRLFADNGMAGTSVEEIAATAGVSKPVIYEHFGSKDGLYAVVVDRE VRHLQDSLNAAMTRPKQGPKRTLESAVLALLDYIDDRPDGFRIISRDSSVGSATGSYASI LSDVASWAEGILAANFDRHGFDVSYSYLYAQALTGMVGMTGQAWLDTREPAKEVVAAHLV DLTFNGLAHLSGSPHLSRHAERESLQSSSS >gi|302034478|gb|GL383157.1| GENE 649 659790 - 659999 84 69 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPLSAKRRRATLMSCSRRWPLVIRARRCGGDGWDEKSDIMILSLLSVAAWPNCDACSKVM GTRFAERSS >gi|302034478|gb|GL383157.1| GENE 650 660158 - 661456 1125 432 aa, chain + ## HITS:1 COG:ML0249 KEGG:ns NR:ns ## COG: ML0249 COG1207 # Protein_GI_number: 15827045 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) # Organism: Mycobacterium leprae # 14 404 5 395 492 318 47.0 2e-86 MTPSPSTDRAEIDGVAAVIVLAAGGGTRMKSTKSKLLHEVAGRPMLSWAIGAARGLNPEH LVVVVGHRREQVEAHLAEDAPDVTTAVQAEQKGTGHAVACGLEGLDELHGEVVVTYGDVP MLTGETLQRMVEVHRERRNLVTVLTAEVEDPTGYGRILRGGEAVVGIVEHKDADEAQRAV REINSGIYVFDAEALREGVSKLSNDNVQGEYYLTDVVTMAADGTVEVPGRGRVGAFRIDD VWQTEGVNDRVQLARMNAEVNRRIVTGWMRAGVTIIDPTSTWIQPDVDLANDVTLYPGVF LNGATTIGAGATVGPDVTVTDSEIREEATVTRSEVTLAVVGEGVRVGPFSNIRPGSVLDR DAKVGAFVETKNTHIGTEAAIPHMAYVGDSEVTAGSSIVAGSVLSRECAAPATVSDITSD SQDDTLNPEADQ >gi|302034478|gb|GL383157.1| GENE 651 661489 - 662421 967 310 aa, chain + ## HITS:1 COG:MT1045 KEGG:ns NR:ns ## COG: MT1045 COG0462 # Protein_GI_number: 15840445 # Func_class: F Nucleotide transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoribosylpyrophosphate synthetase # Organism: Mycobacterium tuberculosis CDC1551 # 1 309 13 322 326 374 60.0 1e-103 MICSGRAYPELAEQIAAELGVELVPSRQVTYANSEIYVQFQESVRGCDAFVIQSHSAPVN EAMMEQLIMIDALKRASAKRITVVSPFYPYARQDKKHLGREPISARLMADLYQAAGADRI MSVDLHAAQIQGFFDGPVDHLWALPVLADYVTSKYDNSDMVVVSPDAGRVRLADMWTDKI GCQLAIIHKRRDPNKANETTTHEVVGEVEGKTCLLVDDMVDTAGTMCQAALALKKHGAKR VIAAATHPILSDPAAERINNSPIEELIVTNTLKIRDDIDIPAMTLLSIAPLIAKAIQEVF EDGSVTSLFR >gi|302034478|gb|GL383157.1| GENE 652 662570 - 663847 810 425 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3583 NR:ns ## KEGG: HMPREF0675_3583 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 425 1 425 425 820 100.0 0 MWPIRTVRAYCAGTVATAVALAAFVTSGAHAAGARETSKPQAYPVPGLFHPCGGSVTPDW HYGETSRHYQSDGTLQFTNQTDHAVDYTASVKTSTNHKIDSNSASKLPPNWNTTLKTELG IVASNGWQDKETFGPVKLGPGESFRVEYGVTVKNFVGMFLGCRDGYLEPSGGANVIQGTA PAERYAYALVIHKDGSISDRALAIPSRGSGKNSRIVDDHDIVMAGPNLEKLADPSKDVPV EPTSPLQRDPSWPKQGERCPARGWYPLDISGIDPLIRQPGYSQDFLNWSKGQYHFTPVTD TVVGAQFAGYVNWNPAADGPPRGWLESVGAIYRAYLPVRTELKGVDLAPGEKVHVEYGTL LRRVNYREVGCKNGVASIVSHYGLASAPAGFWAEATITGTDGTKRTVDVTPDAWKHLPVP TQTTR >gi|302034478|gb|GL383157.1| GENE 653 663883 - 664452 476 189 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3584 NR:ns ## KEGG: HMPREF0675_3584 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 189 1 189 189 336 100.0 3e-91 MIRSLVATLAVGAIVTAGAQMPAQALPVQHQNPANPTTIGAPCSNPGDTGQTVHVVRSYF DGSAGTWTISNYNDTPLPVTRSITETKTKNWSVSAGIDFPLLDVIHISISSSYSTSSTYE VGETVGPYNVAPGKTAVLQAGWIVSDFEGQHTVCGPDKKWQGRGDHFTATLPREHHVRIS TRDNVQYDV >gi|302034478|gb|GL383157.1| GENE 654 664472 - 665068 433 198 aa, chain + ## HITS:1 COG:no KEGG:PPA0534 NR:ns ## KEGG: PPA0534 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 198 1 198 198 361 100.0 8e-99 MLRRAVVGAVTAAVTSTTVLSVVPAGAVQESPNNGINFELPQRWNDNYKPGTRCTPQGTR GVYVTASRRWFKQTDGASVENTTDTAMPVTHTVTVKRSETTEVKGEIKADGTLTTYLNQS YGFDYINTVSWELSQKVGPYDLAPHTQGRLVWGFIMLDVDAQNVSCGADLTWHAVGKPFS GTNPESRYAELRSEGSIG >gi|302034478|gb|GL383157.1| GENE 655 665247 - 665864 1031 205 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|213960306|ref|ZP_03388588.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes SK137] # 1 205 1 205 205 401 100 1e-110 MADIIHLKAEQRTEFGKGAARRIRRDDKVPAVMYGHDHDPIHVTLDGHATLLALRTENPL LSIEIEGQKPMLALPKDVQRDVLKGFVRHVDLLTVRRGEKVDVNVALRITGESAPGTIAM TEFNEIEVQADLLNIPEVIEIDVTGLEAGTTIYLGDLKLPEGTSLLGDAEDVAATVAFPE TEPVEDEESAGEDAQGESEEKAAKE >gi|302034478|gb|GL383157.1| GENE 656 665861 - 666463 269 200 aa, chain + ## HITS:1 COG:Cgl0911 KEGG:ns NR:ns ## COG: Cgl0911 COG0193 # Protein_GI_number: 19552161 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptidyl-tRNA hydrolase # Organism: Corynebacterium glutamicum # 2 200 22 203 204 144 43.0 1e-34 MSPSWLVIGLGNPGPRYDGTRHNVGADVIAELCRRAGEKLSPARGQRAELVRTRLSSAGL GVPAVDAQTVILMRSRTYMNESGIAVSKVASFAGITPDHLIVVHDEIDLDPGRLRLKKGG GDNGHNGLKSIRAHLRTGDFIRVRLGVGRPPGHQDPADWVLARVPARQRAEMGVQVALAA DAVESIIIQGLAAAQNRFNS >gi|302034478|gb|GL383157.1| GENE 657 666503 - 666745 259 80 aa, chain - ## HITS:1 COG:CAC2691 KEGG:ns NR:ns ## COG: CAC2691 COG1052 # Protein_GI_number: 15895949 # Func_class: C Energy production and conversion; H Coenzyme transport and metabolism; R General function prediction only # Function: Lactate dehydrogenase and related dehydrogenases # Organism: Clostridium acetobutylicum # 6 71 255 320 326 72 45.0 2e-13 MNPETIDVIENDHRYFHQDHRLDVLNNHDLTLLRSFPNVVVTPHIAFYSDNVTAEMVHCA MEYLRDFSQTGEPLMEVHPD >gi|302034478|gb|GL383157.1| GENE 658 666662 - 666970 81 102 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3589 NR:ns ## KEGG: HMPREF0675_3589 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 102 1 102 102 177 100.0 2e-43 MVIQNVKTVILVKIPVVVLDDVNSFRIHGIYQCSGVYEFTTDAVDEKNALAHHGELLCVD RVVVHRHSGHMQGDGVAVVEQCLQVDELDDVVLLWVRQEVAG >gi|302034478|gb|GL383157.1| GENE 659 667282 - 667488 61 68 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVGCKLRAQPRLCRYTAWNGTAYDCCTANANAPYHPVLEYYDMQPHSLDFGLTTSRNFST KGKPHDPD >gi|302034478|gb|GL383157.1| GENE 660 667500 - 668555 895 351 aa, chain - ## HITS:1 COG:mlr1136 KEGG:ns NR:ns ## COG: mlr1136 COG1064 # Protein_GI_number: 13471224 # Func_class: R General function prediction only # Function: Zn-dependent alcohol dehydrogenases # Organism: Mesorhizobium loti # 1 349 1 346 346 319 45.0 5e-87 MKAALVEQYHEPLAIRDIPEPAHDSDGVVVEVKACGVCRSDWHGWQGEWPGFTGGSLPHI FGHEFVGLVSDIGNNVSRYRVGDRVIVPFTLGCGHCEYCRSGHSNVCPTVSMPGFSYDGG FAQYVTVPDADANLVKLPDAVDFTDAAGMGCRLMTAYHGIVEVGQIHPGDWLVVYGAGGV GLSATLVATSAGANVIAVDIADDKLALARKVGAIATINSRETDPVEAVRELTDGGADKSV DALGISETLHNAVNSLRSRGTHIQIGMTAEGPVGDVALTINDLIAKEIDFRGSFGMPAVE FRYLLNQVAAGKMKPGQLVTKTIALSEVNDALTAMSTYNTVGTTVITDFTR >gi|302034478|gb|GL383157.1| GENE 661 668930 - 670069 763 379 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3592 NR:ns ## KEGG: HMPREF0675_3592 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 379 1 379 379 706 100.0 0 MQYPLTPKPVRRSGALPIVITVLGAIAILLIVALISAGSPVTFIVGAIPSTAALIVCLLC YRWLDRWEPEPTRLTVMALIWGGSAGVIFSFLVEMAIPASEFVTMAIVAPLAEELAKASV FILVATGARKLELTSLTDHIFYAGICALGFAFVENLGYFALSSSAGEFVVMALVRTGFGV FGHPLYTTATAVGIWAWRTKGGLWKAAVGYIAACLLHGLWNGGPTLLAGSLGLDDTGQLA AMILVYIVLFVPVFIGTIIMTTRNRRNEYEAVRSQLPLMVEAGLVTPAEADMIADPRKRR AILADSGKYGRVAKRNQKRTITAATEAALAQHRIAAGEGGPELIKRRDQLSEWLRSRPDK LGQLPLMPQFPPIQPPATW >gi|302034478|gb|GL383157.1| GENE 662 670133 - 673759 2509 1208 aa, chain + ## HITS:1 COG:MT1048 KEGG:ns NR:ns ## COG: MT1048 COG1197 # Protein_GI_number: 15840448 # Func_class: L Replication, recombination and repair; K Transcription # Function: Transcription-repair coupling factor (superfamily II helicase) # Organism: Mycobacterium tuberculosis CDC1551 # 16 1208 14 1218 1234 1120 53.0 0 MVSVGTTTYPMLVTFGGLTSLLSREPVLSHVVEDALTRRTPTLDLQVAASARPAVAAVLG RSLDGSGRLPVLLVTSTFREAEESVATLKTWLGADAVCYYPSWETLPHERLSPRTDTVGR RMEVLRRLCGTEGEVPQVVVAPVRSLLQPQVAGLGRVAPVRLAVGEEHDLTELATELVNA AYSRVDMVERRGEFAVRGGIVDVFPPVLEHPVRIDFFGDEIEEMTSFAVADQRSTDETHQ ELICAPCRELILTDEVRSRAKALLTDHPELADMLERIGNGQAVEGMEALMPALVDEMELL VDVLPEHAMVVLSDPEMVRSRAADLVRTSEEFLGAGWAAAAGGGQAPIDLAASGYRSLAQ VRSHCLERGMAWWSMSSFSLDSSATDVLVDDDITSAPQTVNPQLVAVEPWHGDVEAAVKD LTARLDDGWTVLLCAEGEGMAKRMSELLGEHNVAARLVDDVDPDATEPCVQVIRLHQRHG FAAESVKLLVASTGDLAESQDPGGTGERRMPRRRRNQIQPLELKPGDLIVHEQHGVGRYV EMVQRTVGGATREYLVIEYAPSKKGQPGDRLFVPVNSLDQVTRYVGGDAPSLDRMGGGDW RKRKARARKAVREIAAELIKLYAARQATKGHAFGPDTAWQRELEGAFAYVETPDQLTTIA DVKRDMEQVVPMDRLVCGDVGYGKTEIAVRAAFKAVQDGKQVAVLVPTTLLVQQHFQTFT ERYAGFPVKVAALSRFQTDTEARETLEGLQRGTVDVVVGTHRLLAKEVEFKDLGLVIVDE EQRFGVEHKEALKRMRVNVDVLAMSATPIPRTLEMAVTGIREMSTIATPPEERHPVLTFA GPYDEGQVVAAIRRELAREGQVFYIHNRVQSIEKTAAKLRELVPEARIVTAHGQMNEKQL EQIMVDFWERRADVLVCTTIVESGIDISTANTLLIDRADLMGLSQLHQLRGRVGRSRERG YAYFLYPADKPLSQTAHDRLATMAAHTDLGSGMAIAMKDLEIRGAGNLLGGEQSGHIADV GFDLYIRLVGDAVAEFRGDSTTADEPEMRIELPVDANLPVEYVETERLRLEMYKRLAEVR SDEEVDAIGAELVDRYGPMPEPVQALLGVARFRLLCRQAGIHEVVPAGRNIRFSPVNLPE SRVMRLKRLYPGSVVKQTAGLVLVPKPMTATIGGQPLGGADLLKWSADLVTNVLAVDTPI GAGRPTEP >gi|302034478|gb|GL383157.1| GENE 663 673827 - 674336 388 169 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3594 NR:ns ## KEGG: HMPREF0675_3594 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 169 3 171 171 276 100.0 3e-73 MRRRLGAAAVAVALVSVASGCASSPSNAATVGNTTVTMKSVDDAVEHCSKFINPSSELTP RQIIASTVIRGAVAQEVLDKRGAKLSDAERDQIVARNGMAALDSDQVCHTMVRSFAGVFH LFDLEGDRKAKADLSAVDVKANPRLGSWDANNLVVQGSSSLSQPFTKTS >gi|302034478|gb|GL383157.1| GENE 664 674345 - 674983 573 212 aa, chain + ## HITS:1 COG:aq_342 KEGG:ns NR:ns ## COG: aq_342 COG1694 # Protein_GI_number: 15605856 # Func_class: R General function prediction only # Function: Predicted pyrophosphatase # Organism: Aquifex aeolicus # 6 195 2 209 257 132 39.0 3e-31 MAAEYARPRAEFSELVEVMARLRDECPWDRSQTHRSLVTYLVEETGEVIDAIEAGTDDDL VEELGDLLLQVVFHSRIGEQGGRFDINEVVGGIVAKLVARHPYVFSDEEVPEDLDAAWEA RKAAAKGRTSSLDGIAYSLSSVARSAKVISRARTRGVGVKLADEPITAAETGDQLVTLIA RAQASGVDADQALRDRLRDLEDEIRKAECRTD >gi|302034478|gb|GL383157.1| GENE 665 675099 - 675629 369 176 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3596 NR:ns ## KEGG: HMPREF0675_3596 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 176 1 176 176 285 100.0 4e-76 MRRALAALFAAVVALGALSGCKGSANDPAGVTEVSDAPTASVPSVSQSSGPKPTPQDVNP NTKLTATPQRGGLKDFLPGVTGIISDRVVTGSTSQTVVVKAGTVTDYYFLCDTTDALMSV TENDESTASTPCHEGFAHLSVGKRAQSGQIELHIDAPENVTYEFVITENPAEDQRQ >gi|302034478|gb|GL383157.1| GENE 666 675717 - 676997 1627 426 aa, chain + ## HITS:1 COG:Cgl0949 KEGG:ns NR:ns ## COG: Cgl0949 COG0148 # Protein_GI_number: 19552199 # Func_class: G Carbohydrate transport and metabolism # Function: Enolase # Organism: Corynebacterium glutamicum # 1 426 1 425 425 553 69.0 1e-157 MATIEFIEAREILDSRGNPTVEVEMILDDGTQARAAVPSGASTGQFEAVELRDGDKKRYS GKGVLKAVENVNEKIAEEVLGCDASEQRIIDQIMIELDGSDNKGKLGANAILGVSLAAAH AAADCAELPLYQYLGGPNSHVLPVPMMNILNGGAHADSDVDIQEFMIAPIGAESFKQAYE WGAAVYHSLKKVLKDKGLATGLGDEGGFAPNLPSNAAALDLILDAIKAAGFEPGKDVALA LDVAASEFFEDGKYTFEGQAKTSAEMIAYYEGLIAKYPLVSIEDPLDEEDWDGWAEFTKK LGEKIQIVGDDLFVTNPKRLAKGIETKAANALLVKVNQIGSLSETIDAVELAHRNGYRCM MSHRSGETEDTTIADLAVALSTGQIKSGAPARGERIAKYNQLLRIEEELGDSAEYAGASA FPRFQA >gi|302034478|gb|GL383157.1| GENE 667 677297 - 677737 330 146 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3598 NR:ns ## KEGG: HMPREF0675_3598 # Name: not_defined # Def: septum formation initiator # Organism: P.acnes_SK137 # Pathway: not_defined # 1 146 72 217 217 249 100.0 2e-65 MGAAVLLVLVMITPSLGIYFSQRSQISRTQDDEARTRASISTLQDEVKRWHDPDYVRAQA RSQLGWVMPGETGYQVIGENGKVIGSTTSLDEKDPANEASADARWWRKAAGSVQDADHPA PPHPSPGAMITPTPSAKLSSPSPSRR >gi|302034478|gb|GL383157.1| GENE 668 677745 - 678287 402 180 aa, chain + ## HITS:1 COG:MT1053 KEGG:ns NR:ns ## COG: MT1053 COG1507 # Protein_GI_number: 15840453 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mycobacterium tuberculosis CDC1551 # 9 159 6 148 163 156 55.0 2e-38 MLEEFTENDRQDVRDQLGREPRGVAGVAWRCGCGKPGVIATEPRLPNGTPFPTTYYLTCP RAASLIGTLESSGLMARMTERLGEDEELADQYRRAHESYIADRVQIGEDAGLDPVPEIDG ISAGGMPTRVKCLHALAGHALAVGPGVNPFGDEVVAELGEFWCDPCAPEHREPESDRRIV >gi|302034478|gb|GL383157.1| GENE 669 678284 - 679216 619 310 aa, chain + ## HITS:1 COG:MT1054 KEGG:ns NR:ns ## COG: MT1054 COG0248 # Protein_GI_number: 15840454 # Func_class: F Nucleotide transport and metabolism; P Inorganic ion transport and metabolism # Function: Exopolyphosphatase # Organism: Mycobacterium tuberculosis CDC1551 # 7 305 6 317 319 227 47.0 3e-59 MSGSHTVAAIDCGTNSIRLLIASADSDGRLVEQARELEMVRLGQGVDATGSFRPDALERT FSACRTFAQAIADHHCDRVGFVATSAARDVSNRDAFFAGVRQALGVDAEVIDGMEEASLS FAGAISGIQVIDEPVLVIDCGGGSTELVLGRGSSIDSRVSLNIGSVRLRERFLHDDPPTV EQIDDARKYVREALDSCPVDVAAARTVIGVAGTVTSLSAIGQNLTDYDRAKVHRSVLTVG QISDLAGKLLSSTVDEVEQMGPLKRRRAEVLCGGAVIIDEVCRRATAGKLVVSETDILDG MALAMLAQGS >gi|302034478|gb|GL383157.1| GENE 670 679448 - 680281 695 277 aa, chain + ## HITS:1 COG:MT1102 KEGG:ns NR:ns ## COG: MT1102 COG4760 # Protein_GI_number: 15840507 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Mycobacterium tuberculosis CDC1551 # 17 275 6 276 278 132 35.0 7e-31 MANPVFSRAEAFQPRGNPYGQPAYAGQGYRAQYGVSGQPGGESGSLLDGPQGQSAERAMT FDDVLGRTGLVLLIIAAIGAVSFALIGPNVVASGPALVVGSIAAFITAMVVSTRRTVPVG GVIFYCICEGLVLGSMSAMFETAYPGIVVQAVLGTFAAAGVTLAAYKFFNIRVTPRFRQI VIISTFGFALAMLVNLVLMLFRINIGVASFGPIGILCSALGVVLAAMNLVVDFDYAEQGV RNQAPASESWRAAFGIAVTMVWLYTEILRILSYFRAD >gi|302034478|gb|GL383157.1| GENE 671 680353 - 681048 414 231 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3603 NR:ns ## KEGG: HMPREF0675_3603 # Name: not_defined # Def: hydrolase, NUDIX family # Organism: P.acnes_SK137 # Pathway: not_defined # 1 231 1 231 231 435 100.0 1e-121 MLITAVGTPGSGQTHAFRVRHGMNPHVELWRHGLVVREYLSADRVDDEIVVTAHVAPRTS SSQPPRTRKSVPDLSEDRQADEPVRPYQRIAAYAVVRSRRGLLGTECSPRTAVPGLWALP GGGLEPGESPAQAVTREVMEESGQRVRLNRIIDLQSDHWIGRSPTGVLEDFHALRIIYSA TSENPTDPYVIDVGGTTQSAQWIPLWRWRRLSWGAATRMCLETHLRDVPST >gi|302034478|gb|GL383157.1| GENE 672 681125 - 682090 542 321 aa, chain - ## HITS:1 COG:no KEGG:PPA0551 NR:ns ## KEGG: PPA0551 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 321 1 321 321 546 99.0 1e-154 MTYRIRFRQTASVILSAAALCVCASCTSTTPTTPSDEPSRTALVPSSKVTASVSPLDGIH TRAIINELVAASGNGPITKVDITKGALSITVQIGNSPTIWTWQNGKIDSSATQSTQTASR PFNPGDFAVEKLPVILSRAADISGSHMNQNLQIVEYNQGTVLMTVSTKPETQTVFFRPNG SAINHIDFASTSGMTEALSDAVASAKQVDQISYQPGKAIIVDTPTTTPGIVMRRTRSADM PAWAVQRRSDASATFSPGLLNPHVIVRIMNLAAAQAHQKPSDMEWTISQDTKLDTPVLRV DINGLTRAFNTDGTDVTDKIK Prediction of potential genes in microbial genomes Time: Wed Jul 20 19:55:08 2011 Seq name: gi|302034477|gb|GL383158.1| Propionibacterium acnes HL005PA4 genomic scaffold Scfld6, whole genome shotgun sequence Length of sequence - 11090 bp Number of predicted genes - 10, with homology - 8 Number of transcription units - 7, operones - 2 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 621 - 992 253 ## PPA1293 putative ribonuclease E 2 2 Tu 1 . - CDS 1462 - 1698 60 ## gi|313836859|gb|EFS74573.1| hypothetical protein HMPREF9621_01039 - Prom 1808 - 1867 4.7 + Prom 1732 - 1791 5.0 3 3 Tu 1 . + CDS 1909 - 2610 289 ## PPA1292 putative transcriptional regulator 4 4 Op 1 . + CDS 3016 - 3261 162 ## gi|327454166|gb|EGF00821.1| conserved domain protein 5 4 Op 2 . + CDS 3298 - 3429 64 ## + Term 3482 - 3522 -0.8 + Prom 3611 - 3670 5.0 6 5 Tu 1 . + CDS 3721 - 4722 345 ## PROTEIN SUPPORTED gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 + Term 4776 - 4829 -0.4 7 6 Tu 1 . - CDS 4777 - 4986 210 ## - Prom 5173 - 5232 3.6 + Prom 4852 - 4911 3.9 8 7 Op 1 . + CDS 4939 - 5712 197 ## COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog 9 7 Op 2 7/0.000 + CDS 5720 - 9016 392 ## COG1020 Non-ribosomal peptide synthetase modules and related proteins 10 7 Op 3 . + CDS 9039 - 10778 321 ## COG1020 Non-ribosomal peptide synthetase modules and related proteins Predicted protein(s) >gi|302034477|gb|GL383158.1| GENE 1 621 - 992 253 123 aa, chain + ## HITS:1 COG:no KEGG:PPA1293 NR:ns ## KEGG: PPA1293 # Name: not_defined # Def: putative ribonuclease E # Organism: P.acnes # Pathway: not_defined # 1 123 143 265 265 230 100.0 2e-59 MRKRNLLRHEVTNLPHHRSSHTLQFPRDNEDARGQASDLLTEILSEGRGQRMHAKLWIEV DEGGRRELQMVRLGDKGGYDCGFALEDVRMFRDALSWLEDQAGQQYGNVADRGRLVGVEI DVW >gi|302034477|gb|GL383158.1| GENE 2 1462 - 1698 60 78 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313836859|gb|EFS74573.1| ## NR: gi|313836859|gb|EFS74573.1| hypothetical protein HMPREF9621_01039 [Propionibacterium acnes HL037PA2] # 30 78 21 69 69 85 93.0 1e-15 MGDYSDVCRGTNDDSRQPWTRTISFFGGRGMEPIALAMPHRSCSSDPCPYLTDDRRSTDA VGMGGVRIIPPWEPRDRR >gi|302034477|gb|GL383158.1| GENE 3 1909 - 2610 289 233 aa, chain + ## HITS:1 COG:no KEGG:PPA1292 NR:ns ## KEGG: PPA1292 # Name: not_defined # Def: putative transcriptional regulator # Organism: P.acnes # Pathway: not_defined # 4 233 1 230 230 454 99.0 1e-126 MKLMKISSSCELSSYLPLNQLVWHEECETLRLKRLTKLLEHEALRESIHVAQGAPYIILD GAHRCRAAFYLGFDSIPAHVVPMAPEQSVSGWVHVYNTRKFSFMPPLVHGEDRGPTIAIL HDGDLRQEVHSKSDLASDLFYAYWDLAELLGGFYYRRSADVPAQGQSVEWVLPSWGAIAK IATNYGPLPAGITRFGSVFFKKCPRCIAEREKSIMSDPVLDRDEVKSLAVMKD >gi|302034477|gb|GL383158.1| GENE 4 3016 - 3261 162 81 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|327454166|gb|EGF00821.1| ## NR: gi|327454166|gb|EGF00821.1| conserved domain protein [Propionibacterium acnes HL083PA2] # 1 81 22 102 102 127 100.0 3e-28 MERGAVAVVRKASTSSTEKSFETTAKPGSATASTSTPTGCGLVAQTIHFPSCDKLNLGPS RFASSGFPKAFFDTSDCTGTL >gi|302034477|gb|GL383158.1| GENE 5 3298 - 3429 64 43 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRQRKQSSIRTYLRALSRRSGLALSISCGKALLGNVSSDTREM >gi|302034477|gb|GL383158.1| GENE 6 3721 - 4722 345 333 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 [Streptococcus pneumoniae SP6-BS73] # 2 298 3 299 308 137 33 3e-32 MIAGSIEELDENSQFVRLKNSFPKHDVYAKLEGLNTAGSVKLKTAIALVDSLEKLHGLQP GGWVVESSSGSLGIALSGVCARRGYKLTIVTDVNANSRSISHMRALGAEVEVVQSLDAAG GFLGTRLARVRELVEMPGGPLWTNQYENVANPEVHSKKTYRAIVEELGDPDYLFVGAGTT GTLMGVSRAVMKRGSCTKVCAIDSTGSVTFGGAPSRRYIPGLGASVKPPIFDEKFPLKRY YIDEIDTVRQCRRIAQVEGFLPGGSTGTVLAAFDALRDKIPEGSRVVIIAPDLGERYLDG VYNDDWVMENFGESAFNYAIRPVAHEVKETEGI >gi|302034477|gb|GL383158.1| GENE 7 4777 - 4986 210 69 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MINILRKARNPFNSRHTGLIIDIRWQRYDTISWSIWKPKKITIGTYCISSVMCSINTFNK IDEKRLSAF >gi|302034477|gb|GL383158.1| GENE 8 4939 - 5712 197 257 aa, chain + ## HITS:1 COG:RSp0418 KEGG:ns NR:ns ## COG: RSp0418 COG2423 # Protein_GI_number: 17548639 # Func_class: E Amino acid transport and metabolism # Function: Predicted ornithine cyclodeaminase, mu-crystallin homolog # Organism: Ralstonia solanacearum # 1 249 78 338 340 91 28.0 2e-18 MSGIKWISSFPENVDHGLQRASAVIVLNNTDNGYAYAFIEASRISAARTAASAALAVRVL HGAPTSIGVVGSGPIAQTTLHFIKSLYTTAVPVKIHDLNSELVARIVTRHGPECSVVSLE EALGCDLVLLATSAGTPYVPMSVRFQPNQLVLNISLRDLHPETIRTANNVFDDVEHCLKA NTTPHLLEQLNGNRNFITGTLAEFICSEKQLDPDHPTVFSPFGLGILDLAVAQSLYEHVQ ISGDGLRVPDFHGDMKR >gi|302034477|gb|GL383158.1| GENE 9 5720 - 9016 392 1098 aa, chain + ## HITS:1 COG:PA2424_4 KEGG:ns NR:ns ## COG: PA2424_4 COG1020 # Protein_GI_number: 15597620 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Non-ribosomal peptide synthetase modules and related proteins # Organism: Pseudomonas aeruginosa # 28 641 468 1091 1102 266 33.0 2e-70 MINLTKSLEKNGLSLLATGSALVGENVDWPLERTLYSYLVEWAQITSHHVTVIDIHGEEI TYEMLLNRVNNRAYLLEKKHAFGRVVISEHSRGIECLVDILACSAVGAIYTPIDPQWPEA RRKHIKTITNAAAIFTENTSHVTEAKAPLGVTFLERVDDPFNTPSYCFFTSGSTGEPKGA LIAHMGMMNHLHSKAHLLHLGADSVVAQTAPTTFDVSIWQFCSALLVGGAVRIVPNGISQ DPHELFSLLKEKHITHIELVPTVFRELIHEIGPSVSFSGLEYVLVTGEELPLRLAKDWAE KFPSVPLINAYGPTECSDDVTHAIVDGESLNSGEVPIGIPIPNASLYVLEYAEGTWRPVP PGAQGELFVAGLCVGLGYIGSPDKTAQAFARIDGYPFRIYRTGDLVHQRADSQLVYDGRA DRQIKISGVRIEPGEIENRILQEIPELEDVVVVKFHPRVRERRAMVLRETTHQFLRQGDA SLAAFYLPRADCLITPKMLNNRAKSSLPRVMCPSRWIEVTDIPTTSNGKVDIKLLERRAG ELLLNEIQESREGSIPGRVEQNQDSFILLVQDVLGTPVNPELTFIESGGDSLRAIQLANI VRSRGSYVRVRDLLSSYTLGSLAKEYQAQQISPKKSTSAKRSPSRFDDVKIPLTCDMNPA QQGIYFQWLLEPESPYYNYQILLECAGSNTDRIRRALGQALRANPQLMAKFGVDSTGRFT QTFPISAIDMDEISIHEVASAQEARKICWMKAAVPFNLEEGPAIAVDEIRINGYSTWFVL TMNEILIDGWGAMKFMEQLISLFECRNMDDQKIEVKTAMTSALEYFQHLSKPEEISAEAR EFWSKSLDGVKSCFPLRDTLNSSCDPYAASVIEVSLDDEATAEIRSTAHALSTSPFAVFV AAYSLALAAVSDQHDFVVGAPVAGRNDEYEIGVPTLMLNMIAIRTRIDVEKKISDTVRSM ISNVTEAVSFGDSVFSKVVSEFADHTNEDPLFSTMVNMLTYPSLEFWDGDRSLHLTELNT GFTKYDASLYIQRHGEDYTLQLAYKVAYVTPERANKVLALTAWFLTSDWLSGKTTVANAI KTALNDCDTSQITMLKSY >gi|302034477|gb|GL383158.1| GENE 10 9039 - 10778 321 579 aa, chain + ## HITS:1 COG:BS_ppsB_1 KEGG:ns NR:ns ## COG: BS_ppsB_1 COG1020 # Protein_GI_number: 16078894 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Non-ribosomal peptide synthetase modules and related proteins # Organism: Bacillus subtilis # 133 576 607 1041 1050 169 28.0 2e-41 MQPSHDLLEGFRNIVIQKPGDVCLTGPAGEQCSWEQLVKNILAWRRWFNRKQSEGVTFAA RLDLSAKSVALVIAAVTLPVKIAWIPLNIPASRERDMIINLGPKTVLIDDSTAEEAIFAG NWISDVRSLTWSGKSKFLYFTSGSEGVPKAVQVGMDAVRNRITWMWNAYPYESSDLVVVQ KPLSFVASFWEVLGTLLAGVTGVLITNIERSRPDVMFDRLASSGATHLFTTPPALASLCD IATEQGSTLPQLRLACSSADQLMASVVRQFFEIAPRARVVNLYGATETSANTTSFEVSRS GSIPDPIPLGEPICATKIVIRDMKGNEKLSGEEGQICVQGAPVADGYIVNGQLSPGDDAF FTLGSGQREIRTGDLGIIKDGVLSLVGRLDNAVNIAGYKIHLEEVERAAARVANSTKQCG AVYHQGSGGFLALVIPREWESQVTTSRLAEFLPSYMIPLKIVTTQNVPRSRTGKIDRSEC LKLVTQSELYDHDRISQGQMQRNSVHDQVQNIWDMVLGKKSHGEDRDFFSAGGNSLRAVQ LLTAIGKQFGVRVPLRNFYSNPTISCLVSLLMPVEEREQ Prediction of potential genes in microbial genomes Time: Wed Jul 20 19:55:37 2011 Seq name: gi|302034476|gb|GL383159.1| Propionibacterium acnes HL005PA4 genomic scaffold Scfld8, whole genome shotgun sequence Length of sequence - 1004 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 910 575 ## HMPREF0675_4713 thrombospondin type 3 repeat protein Predicted protein(s) >gi|302034476|gb|GL383159.1| GENE 1 1 - 910 575 303 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4713 NR:ns ## KEGG: HMPREF0675_4713 # Name: not_defined # Def: thrombospondin type 3 repeat protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 303 3 305 430 562 95.0 1e-159 MTVLGDSYSAGNGTLVDGYPADGSYRSPKNYGSVLTRRLNREFGDDTTFQTDVRAWSGAQ ITTGDHTIVSQADGMDPHTHVVLMTAGGNDLDFTSVVENCFIERVWSAAECGGSVDASRK KIDATMTKTTTLLSHIQQRLADPAHTRVILIGYPYLIRADRDAPGSDVPSTRVRAAEDEF RTKQTATVKAWNKTHALKVTYTPTTSLFNTHEPEPLVHNGDQNPQRWINAVFETAGYSYN GNGVILSEPSQDEKNWYHPNVVGHEKIAGLVHDALLSRTVRSASLSESVAQVASVPGVRM RAA Prediction of potential genes in microbial genomes Time: Wed Jul 20 19:55:46 2011 Seq name: gi|302034475|gb|GL383160.1| Propionibacterium acnes HL005PA4 genomic scaffold Scfld9, whole genome shotgun sequence Length of sequence - 1868 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + SSU_RRNA 396 - 1868 99.0 # DQ158099 [D:1..1501] # 16S ribosomal RNA # uncultured bacterium # Bacteria; environmental samples. Prediction of potential genes in microbial genomes Time: Wed Jul 20 19:55:47 2011 Seq name: gi|302034474|gb|GL383161.1| Propionibacterium acnes HL005PA4 genomic scaffold Scfld10, whole genome shotgun sequence Length of sequence - 2181 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - LSU_RRNA 1 - 1752 99.0 # AE017283 [D:608072..610963] # 23SrRNA # Propionibacterium acnes KPA171202 # Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Propionibacterineae; Propionibacteriaceae; Propionibacterium. Prediction of potential genes in microbial genomes Time: Wed Jul 20 20:01:00 2011 Seq name: gi|302034473|gb|GL383162.1| Propionibacterium acnes HL005PA4 genomic scaffold Scfld13, whole genome shotgun sequence Length of sequence - 766895 bp Number of predicted genes - 767, with homology - 741 Number of transcription units - 411, operones - 172 average op.length - 3.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 110 - 409 194 ## PPA1286 putative thioesterase 2 2 Tu 1 . - CDS 1080 - 1322 158 ## 3 3 Tu 1 . - CDS 1494 - 1631 68 ## - Prom 1711 - 1770 1.8 4 4 Tu 1 . - CDS 1960 - 2130 100 ## gi|314917982|gb|EFS81813.1| hypothetical protein HMPREF9598_01546 - Prom 2212 - 2271 3.2 + Prom 2087 - 2146 3.8 5 5 Tu 1 . + CDS 2166 - 2318 68 ## gi|313807795|gb|EFS46282.1| hypothetical protein HMPREF9580_01626 + Prom 2380 - 2439 2.6 6 6 Tu 1 . + CDS 2491 - 3513 650 ## PPA1284 hypothetical protein + Term 3742 - 3778 -0.8 7 7 Tu 1 . + CDS 4161 - 4400 82 ## PPA1283 hypothetical protein + Prom 4759 - 4818 2.5 8 8 Tu 1 . + CDS 4864 - 5634 617 ## PPA1281 hypothetical protein + Term 5671 - 5715 4.2 9 9 Op 1 . + CDS 5927 - 6592 525 ## COG1192 ATPases involved in chromosome partitioning 10 9 Op 2 . + CDS 6589 - 6846 295 ## PPA1279 hypothetical protein 11 10 Tu 1 . + CDS 7047 - 7460 363 ## PPA1278 hypothetical protein - Term 7695 - 7736 3.6 12 11 Tu 1 . - CDS 7806 - 8186 197 ## PPA2383 hypothetical protein - Prom 8231 - 8290 2.0 13 12 Tu 1 . - CDS 8840 - 9115 99 ## PPA2384 hypothetical protein 14 13 Tu 1 . + CDS 9609 - 9857 202 ## - TRNA 9814 - 9890 89.4 # Met CAT 0 0 + Prom 9875 - 9934 2.5 15 14 Op 1 38/0.000 + CDS 10086 - 11573 1200 ## COG0747 ABC-type dipeptide transport system, periplasmic component 16 14 Op 2 49/0.000 + CDS 11615 - 12547 615 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 17 14 Op 3 4/0.053 + CDS 12544 - 13356 475 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 18 14 Op 4 1/0.128 + CDS 13356 - 14165 430 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 19 14 Op 5 . + CDS 14165 - 14950 538 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 20 14 Op 6 . + CDS 14997 - 16187 993 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases 21 15 Tu 1 . - CDS 16231 - 17019 512 ## COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family - Prom 17191 - 17250 1.5 + Prom 17147 - 17206 3.4 22 16 Tu 1 . + CDS 17226 - 18038 497 ## COG2939 Carboxypeptidase C (cathepsin A) 23 17 Op 1 4/0.053 - CDS 18457 - 19458 525 ## COG1162 Predicted GTPases 24 17 Op 2 . - CDS 19460 - 20578 423 ## COG0128 5-enolpyruvylshikimate-3-phosphate synthase - Term 20594 - 20638 4.2 25 18 Tu 1 . - CDS 20739 - 21365 573 ## COG2259 Predicted membrane protein - Prom 21441 - 21500 1.6 + Prom 21400 - 21459 2.0 26 19 Op 1 . + CDS 21562 - 22266 477 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 27 19 Op 2 . + CDS 22269 - 22529 255 ## HMPREF0675_4330 anti-sigma factor - Term 22566 - 22603 10.8 28 20 Tu 1 . - CDS 22619 - 22693 73 ## 29 21 Tu 1 . + CDS 22875 - 24350 1049 ## COG3920 Signal transduction histidine kinase - Term 24284 - 24310 -0.6 30 22 Tu 1 . - CDS 24380 - 24631 272 ## PPA1264 transcription factor WhiB3 - Prom 24738 - 24797 2.2 31 23 Tu 1 . + CDS 24913 - 25311 277 ## PPA1263 hypothetical protein 32 24 Op 1 . - CDS 25366 - 25560 192 ## PPA1262 hypothetical protein 33 24 Op 2 . - CDS 25609 - 29316 3036 ## COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes - Prom 29445 - 29504 3.2 34 25 Tu 1 . + CDS 29252 - 29419 63 ## - Term 29453 - 29490 -1.0 35 26 Tu 1 . - CDS 29506 - 30822 607 ## PPA1260 hypothetical protein - Prom 30973 - 31032 2.3 - TRNA 30877 - 30948 73.2 # Arg CCG 0 0 36 27 Op 1 3/0.074 + CDS 31070 - 32500 950 ## COG0019 Diaminopimelate decarboxylase 37 27 Op 2 11/0.000 + CDS 32571 - 33896 912 ## COG0460 Homoserine dehydrogenase 38 27 Op 3 19/0.000 + CDS 33899 - 34969 940 ## COG0498 Threonine synthase 39 27 Op 4 3/0.074 + CDS 34980 - 35870 596 ## COG0083 Homoserine kinase + Prom 36041 - 36100 2.8 40 28 Op 1 9/0.000 + CDS 36274 - 38070 1203 ## COG1158 Transcription termination factor 41 28 Op 2 10/0.000 + CDS 38186 - 38395 378 ## PROTEIN SUPPORTED gi|50842732|ref|YP_055959.1| 50S ribosomal protein L31 42 28 Op 3 . + CDS 38517 - 39602 391 ## COG0216 Protein chain release factor A - Term 39333 - 39366 0.2 43 29 Tu 1 . - CDS 39534 - 39728 67 ## 44 30 Op 1 10/0.000 + CDS 39692 - 40477 257 ## PROTEIN SUPPORTED gi|107028787|ref|YP_625882.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 45 30 Op 2 4/0.053 + CDS 40470 - 41333 626 ## COG0009 Putative translation factor (SUA5) 46 30 Op 3 . + CDS 41342 - 42445 674 ## COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 47 31 Op 1 . + CDS 42602 - 43096 134 ## PPA1247 putative cyanate permease 48 31 Op 2 . + CDS 43111 - 43389 241 ## PPA1246 hypothetical protein 49 31 Op 3 . + CDS 43386 - 44162 628 ## COG0356 F0F1-type ATP synthase, subunit a 50 32 Tu 1 . - CDS 44126 - 44269 61 ## HMPREF0675_4308 hypothetical protein 51 33 Op 1 . + CDS 44253 - 44474 381 ## HMPREF0675_4309 ATP synthase subunit C (EC:3.6.3.14) 52 33 Op 2 38/0.000 + CDS 44485 - 45039 552 ## COG0711 F0F1-type ATP synthase, subunit b 53 33 Op 3 41/0.000 + CDS 45036 - 45827 331 ## COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 54 33 Op 4 42/0.000 + CDS 45881 - 47518 1661 ## COG0056 F0F1-type ATP synthase, alpha subunit 55 33 Op 5 42/0.000 + CDS 47522 - 48466 632 ## COG0224 F0F1-type ATP synthase, gamma subunit 56 33 Op 6 42/0.000 + CDS 48478 - 49932 1506 ## COG0055 F0F1-type ATP synthase, beta subunit 57 33 Op 7 . + CDS 49938 - 50378 370 ## COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) 58 34 Tu 1 . + CDS 50492 - 51004 335 ## HMPREF0675_4301 hypothetical protein 59 35 Tu 1 . - CDS 51005 - 51670 582 ## COG2096 Uncharacterized conserved protein 60 36 Tu 1 . - CDS 51833 - 52366 193 ## COG1573 Uracil-DNA glycosylase - Term 52508 - 52539 3.8 61 37 Tu 1 . - CDS 52672 - 52944 107 ## PPA1234 hypothetical protein 62 38 Tu 1 . + CDS 53500 - 54696 1000 ## COG0477 Permeases of the major facilitator superfamily 63 39 Op 1 . + CDS 54874 - 55302 162 ## COG1186 Protein chain release factor B + Prom 55354 - 55413 1.6 64 39 Op 2 . + CDS 55620 - 56375 783 ## PPA1231 cAMP factor + Term 56407 - 56453 18.7 65 40 Tu 1 . + CDS 56543 - 57277 419 ## PPA1230 hypothetical protein + Prom 57409 - 57468 1.6 66 41 Op 1 . + CDS 57492 - 57911 311 ## HMPREF0675_4292 transcriptional regulator, ArsR family 67 41 Op 2 . + CDS 57995 - 58819 454 ## COG1230 Co/Zn/Cd efflux system component - Term 58770 - 58805 -0.1 68 42 Op 1 . - CDS 58913 - 60316 988 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 69 42 Op 2 . - CDS 60327 - 60632 67 ## gi|282853816|ref|ZP_06263153.1| hypothetical protein HMPREF9206_1749 70 43 Tu 1 . + CDS 60466 - 61992 1450 ## COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase 71 44 Tu 1 . - CDS 61929 - 62732 291 ## COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase 72 45 Op 1 . + CDS 62620 - 62865 142 ## gi|315105862|gb|EFT77838.1| conserved domain protein 73 45 Op 2 . + CDS 62931 - 63656 490 ## COG0584 Glycerophosphoryl diester phosphodiesterase + Term 63682 - 63741 6.1 74 46 Tu 1 . + CDS 63818 - 64150 322 ## HMPREF0675_4287 hypothetical protein + Term 64317 - 64356 -0.9 - Term 64139 - 64173 1.5 75 47 Op 1 2/0.096 - CDS 64205 - 65023 812 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 76 47 Op 2 . - CDS 65004 - 66593 497 ## COG0815 Apolipoprotein N-acyltransferase 77 47 Op 3 1/0.128 - CDS 66590 - 67081 335 ## COG1522 Transcriptional regulators 78 47 Op 4 . - CDS 67078 - 67701 303 ## COG0500 SAM-dependent methyltransferases 79 48 Tu 1 . + CDS 68086 - 68274 112 ## gi|313807717|gb|EFS46204.1| hypothetical protein HMPREF9580_01546 + Term 68286 - 68339 -0.4 80 49 Tu 1 . + CDS 68381 - 69598 552 ## COG0427 Acetyl-CoA hydrolase - Term 69551 - 69581 0.3 81 50 Tu 1 . - CDS 69609 - 70457 487 ## COG0561 Predicted hydrolases of the HAD superfamily 82 51 Op 1 . + CDS 70521 - 70676 73 ## 83 51 Op 2 2/0.096 + CDS 70673 - 71584 365 ## COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain 84 52 Op 1 . + CDS 71686 - 72339 545 ## COG0274 Deoxyribose-phosphate aldolase 85 52 Op 2 . + CDS 72336 - 73769 1261 ## COG0738 Fucose permease 86 52 Op 3 . + CDS 73756 - 74829 445 ## HMPREF0675_4277 hypothetical protein 87 52 Op 4 . + CDS 74831 - 75745 587 ## COG0524 Sugar kinases, ribokinase family 88 53 Tu 1 . - CDS 76275 - 76937 373 ## gi|314915739|gb|EFS79570.1| conserved domain protein + Prom 76674 - 76733 2.3 89 54 Op 1 . + CDS 76899 - 77234 428 ## gi|313764264|gb|EFS35628.1| hypothetical protein HMPREF9567_01108 90 54 Op 2 . + CDS 77294 - 78724 752 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins + Term 78729 - 78759 -0.7 + Prom 78806 - 78865 4.1 91 55 Tu 1 . + CDS 78896 - 79828 751 ## Closa_0181 Viral replication-associated protein 92 56 Tu 1 . - CDS 79771 - 81033 410 ## Rxyl_1927 phage integrase - Prom 81140 - 81199 2.1 - TRNA 81131 - 81207 88.4 # Pro GGG 0 0 93 57 Op 1 7/0.011 - CDS 81271 - 82641 910 ## COG1160 Predicted GTPases 94 57 Op 2 1/0.128 - CDS 82706 - 83377 211 ## PROTEIN SUPPORTED gi|15639271|ref|NP_218720.1| bifunctional cytidylate kinase/ribosomal protein S1 95 57 Op 3 . - CDS 83440 - 84537 609 ## COG0287 Prephenate dehydrogenase 96 57 Op 4 3/0.074 - CDS 84524 - 85201 559 ## COG0638 20S proteasome, alpha and beta subunits 97 57 Op 5 . - CDS 85201 - 86037 458 ## COG0638 20S proteasome, alpha and beta subunits - Prom 86222 - 86281 1.9 98 58 Op 1 . + CDS 86184 - 86804 408 ## HMPREF0675_4268 transcriptional regulator, TetR family 99 58 Op 2 . + CDS 86804 - 87709 456 ## COG0410 ABC-type branched-chain amino acid transport systems, ATPase component 100 58 Op 3 . + CDS 87713 - 89899 1357 ## COG1511 Predicted membrane protein 101 58 Op 4 . + CDS 89974 - 90285 231 ## HMPREF0675_4265 hypothetical protein - Term 90281 - 90324 12.0 102 59 Tu 1 . - CDS 90360 - 91997 1312 ## COG2519 tRNA(1-methyladenosine) methyltransferase and related methyltransferases 103 60 Tu 1 . + CDS 92394 - 93287 437 ## HMPREF0675_4262 hypothetical protein - Term 93066 - 93102 4.0 104 61 Tu 1 . - CDS 93304 - 93975 500 ## COG0036 Pentose-5-phosphate-3-epimerase - Term 94077 - 94138 13.1 105 62 Tu 1 . - CDS 94154 - 94999 959 ## HMPREF0675_4260 hypothetical protein 106 63 Tu 1 . - CDS 95320 - 96090 641 ## PPA1197 hypothetical protein - Prom 96169 - 96228 2.3 107 64 Op 1 20/0.000 - CDS 96230 - 97606 900 ## COG0144 tRNA and rRNA cytosine-C5-methylases 108 64 Op 2 4/0.053 - CDS 97603 - 98550 300 ## COG0223 Methionyl-tRNA formyltransferase 109 64 Op 3 2/0.096 - CDS 98569 - 100578 222 ## COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase 110 64 Op 4 4/0.053 - CDS 100626 - 101819 949 ## COG0192 S-adenosylmethionine synthetase 111 64 Op 5 10/0.000 - CDS 101859 - 103091 639 ## COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase 112 64 Op 6 25/0.000 - CDS 103104 - 103451 411 ## COG1758 DNA-directed RNA polymerase, subunit K/omega 113 64 Op 7 . - CDS 103480 - 104091 388 ## COG0194 Guanylate kinase 114 64 Op 8 . - CDS 104146 - 104466 259 ## PPA1189 integration host factor + Prom 104309 - 104368 2.2 115 65 Tu 1 . + CDS 104409 - 104729 185 ## 116 66 Op 1 6/0.032 - CDS 104562 - 105347 172 ## COG0781 Transcription termination factor 117 66 Op 2 . - CDS 105344 - 105913 661 ## COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) 118 67 Tu 1 . + CDS 105827 - 106042 134 ## 119 68 Tu 1 . + CDS 106190 - 107140 722 ## COG2326 Uncharacterized conserved protein 120 69 Tu 1 . + CDS 107282 - 108382 652 ## COG2843 Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) + Term 108467 - 108514 0.3 121 70 Op 1 20/0.000 - CDS 108425 - 109510 865 ## COG0337 3-dehydroquinate synthetase 122 70 Op 2 7/0.011 - CDS 109513 - 110016 420 ## COG0703 Shikimate kinase 123 70 Op 3 5/0.053 - CDS 110013 - 111209 737 ## COG0082 Chorismate synthase 124 70 Op 4 4/0.053 - CDS 111223 - 112029 469 ## COG0169 Shikimate 5-dehydrogenase 125 70 Op 5 4/0.053 - CDS 112061 - 113170 989 ## COG1559 Predicted periplasmic solute-binding protein 126 70 Op 6 9/0.000 - CDS 113167 - 113649 288 ## COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 127 70 Op 7 . - CDS 113646 - 116324 2417 ## COG0013 Alanyl-tRNA synthetase 128 71 Op 1 . - CDS 116470 - 116931 454 ## PPA1177 hypothetical protein 129 71 Op 2 . - CDS 116928 - 118316 1170 ## COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase 130 72 Tu 1 . - CDS 118418 - 120238 1612 ## COG0173 Aspartyl-tRNA synthetase - Prom 120285 - 120344 2.2 - Term 120355 - 120404 18.2 131 73 Op 1 . - CDS 120419 - 121489 871 ## PPA1174 hypothetical protein 132 73 Op 2 . - CDS 121609 - 122253 432 ## COG1309 Transcriptional regulator 133 74 Op 1 . + CDS 122388 - 126770 3332 ## COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) 134 74 Op 2 . + CDS 126804 - 127367 336 ## PROTEIN SUPPORTED gi|229859876|ref|ZP_04479533.1| acetyltransferase, ribosomal protein N-acetylase 135 74 Op 3 . + CDS 127360 - 128052 482 ## HMPREF0675_4231 hypothetical protein 136 75 Op 1 4/0.053 - CDS 128109 - 129473 1445 ## COG0124 Histidyl-tRNA synthetase - Term 129491 - 129518 -0.1 137 75 Op 2 . - CDS 129573 - 130244 487 ## COG0491 Zn-dependent hydrolases, including glyoxylases 138 76 Tu 1 . + CDS 130237 - 131520 1178 ## HMPREF0675_4229 hypothetical protein - Term 131398 - 131451 -0.4 139 77 Tu 1 . - CDS 131585 - 133909 1609 ## COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases 140 78 Op 1 3/0.074 - CDS 134039 - 134386 210 ## COG1226 Kef-type K+ transport systems, predicted NAD-binding component 141 78 Op 2 . - CDS 134441 - 135133 488 ## COG1226 Kef-type K+ transport systems, predicted NAD-binding component 142 78 Op 3 . - CDS 135136 - 135669 409 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins 143 78 Op 4 31/0.000 - CDS 135666 - 136841 1056 ## COG0341 Preprotein translocase subunit SecF 144 78 Op 5 . - CDS 136843 - 138501 1112 ## COG0342 Preprotein translocase subunit SecD 145 78 Op 6 . - CDS 138574 - 139005 404 ## HMPREF0675_4222 preprotein translocase, YajC subunit 146 78 Op 7 29/0.000 - CDS 139066 - 140088 463 ## COG2255 Holliday junction resolvasome, helicase subunit 147 78 Op 8 14/0.000 - CDS 140142 - 140747 458 ## COG0632 Holliday junction resolvasome, DNA-binding subunit 148 78 Op 9 8/0.000 - CDS 140744 - 141289 295 ## COG0817 Holliday junction resolvasome, endonuclease subunit 149 78 Op 10 . - CDS 141331 - 142125 986 ## COG0217 Uncharacterized conserved protein - Prom 142209 - 142268 2.6 150 79 Op 1 25/0.000 - CDS 142275 - 143042 427 ## COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase 151 79 Op 2 18/0.000 - CDS 143055 - 143672 525 ## COG0118 Glutamine amidotransferase 152 79 Op 3 13/0.000 - CDS 143665 - 144285 430 ## COG0131 Imidazoleglycerol-phosphate dehydratase 153 79 Op 4 19/0.000 - CDS 144282 - 145448 800 ## COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 154 79 Op 5 . - CDS 145445 - 146677 793 ## COG0141 Histidinol dehydrogenase 155 79 Op 6 . - CDS 146769 - 147314 423 ## HMPREF0675_4212 hypothetical protein 156 79 Op 7 . - CDS 147320 - 150892 3485 ## COG0587 DNA polymerase III, alpha subunit 157 79 Op 8 . - CDS 150954 - 151157 62 ## gi|313792017|gb|EFS40118.1| hypothetical protein HMPREF9575_02002 158 80 Op 1 13/0.000 - CDS 151857 - 152222 278 ## COG1447 Phosphotransferase system cellobiose-specific component IIA 159 80 Op 2 10/0.000 - CDS 152219 - 153487 798 ## COG1455 Phosphotransferase system cellobiose-specific component IIC 160 80 Op 3 2/0.096 - CDS 153493 - 153804 241 ## COG1440 Phosphotransferase system cellobiose-specific component IIB 161 80 Op 4 . - CDS 153832 - 155262 831 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase 162 80 Op 5 . - CDS 155259 - 156137 142 ## HMPREF0675_4205 Tat (twin-arginine translocation) pathway signal sequence 163 81 Op 1 . - CDS 156266 - 157210 409 ## COG2971 Predicted N-acetylglucosamine kinase 164 81 Op 2 . - CDS 157191 - 157634 315 ## PPA1143 hypothetical protein 165 81 Op 3 9/0.000 - CDS 157641 - 159158 1052 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 166 81 Op 4 . - CDS 159178 - 160092 515 ## COG2103 Predicted sugar phosphate isomerase - Prom 160171 - 160230 5.9 167 82 Op 1 . + CDS 160218 - 161090 619 ## COG1737 Transcriptional regulators 168 82 Op 2 . + CDS 161100 - 161747 652 ## COG3247 Uncharacterized conserved protein 169 83 Op 1 . - CDS 161846 - 163993 1401 ## COG1680 Beta-lactamase class C and other penicillin binding proteins 170 83 Op 2 . - CDS 164045 - 164323 190 ## HMPREF0675_4198 hypothetical protein 171 83 Op 3 21/0.000 - CDS 164411 - 165883 970 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases 172 83 Op 4 . - CDS 165876 - 170393 3311 ## COG0069 Glutamate synthase domain 2 173 84 Op 1 3/0.074 - CDS 170515 - 171354 475 ## COG0682 Prolipoprotein diacylglyceryltransferase 174 84 Op 2 37/0.000 - CDS 171351 - 171848 177 ## PROTEIN SUPPORTED gi|149916131|ref|ZP_01904653.1| 50S ribosomal protein L25/general stress protein Ctc 175 84 Op 3 13/0.000 - CDS 171845 - 173101 845 ## COG0133 Tryptophan synthase beta chain 176 84 Op 4 . - CDS 173129 - 173929 504 ## COG0134 Indole-3-glycerol phosphate synthase 177 84 Op 5 . - CDS 173930 - 174145 238 ## HMPREF0675_4191 hypothetical protein 178 85 Op 1 . - CDS 174259 - 174897 226 ## PPA1128 hypothetical protein 179 85 Op 2 . - CDS 174945 - 175262 232 ## HMPREF0675_4189 hypothetical protein 180 85 Op 3 . - CDS 175259 - 175636 242 ## COG0139 Phosphoribosyl-AMP cyclohydrolase 181 86 Tu 1 . + CDS 175725 - 176360 492 ## HMPREF0675_4187 conserved hypothetical protein TIGR03085 - Term 176127 - 176157 3.7 182 87 Op 1 21/0.000 - CDS 176383 - 177876 1228 ## COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) 183 87 Op 2 31/0.000 - CDS 177873 - 179378 438 ## PROTEIN SUPPORTED gi|163737840|ref|ZP_02145257.1| 30S ribosomal protein S4 184 87 Op 3 . - CDS 179375 - 179698 291 ## COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit 185 88 Op 1 . + CDS 179840 - 180451 546 ## PPA1121 hypothetical protein 186 88 Op 2 . + CDS 180458 - 180970 511 ## PPA1120 hypothetical protein + Term 181078 - 181115 -1.0 187 89 Op 1 . - CDS 180996 - 181208 253 ## HMPREF0675_4181 hypothetical protein 188 89 Op 2 . - CDS 181219 - 182205 414 ## HMPREF0675_4180 methionine synthase, vitamin-B12 independent (EC:2.1.1.14) 189 89 Op 3 7/0.011 - CDS 182202 - 183302 756 ## COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 190 89 Op 4 . - CDS 183392 - 184531 554 ## COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes - Prom 184617 - 184676 1.8 + Prom 184581 - 184640 1.6 191 90 Tu 1 2/0.096 + CDS 184688 - 186808 1381 ## COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases 192 91 Op 1 7/0.011 + CDS 187060 - 189186 1786 ## COG0366 Glycosidases 193 91 Op 2 4/0.053 + CDS 189183 - 190955 1218 ## COG0366 Glycosidases 194 91 Op 3 2/0.096 + CDS 190952 - 192250 648 ## COG3281 Uncharacterized protein, probably involved in trehalose biosynthesis 195 91 Op 4 . + CDS 192329 - 194263 1774 ## COG0296 1,4-alpha-glucan branching enzyme 196 91 Op 5 . + CDS 194287 - 195081 422 ## PROTEIN SUPPORTED gi|227379795|ref|ZP_03863252.1| acetyltransferase, ribosomal protein N-acetylase 197 92 Tu 1 . + CDS 195351 - 197396 1990 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific + Term 197443 - 197497 4.6 198 93 Op 1 11/0.000 - CDS 197496 - 199979 1740 ## COG1554 Trehalose and maltose hydrolases (possible phosphorylases) 199 93 Op 2 . - CDS 200000 - 200734 487 ## COG0637 Predicted phosphatase/phosphohexomutase + Prom 200526 - 200585 1.6 200 94 Tu 1 . + CDS 200651 - 200881 118 ## gi|315092794|gb|EFT64770.1| hypothetical protein HMPREF9582_01219 201 95 Tu 1 . - CDS 200939 - 201880 797 ## COG3118 Thioredoxin domain-containing protein + Prom 201917 - 201976 1.6 202 96 Tu 1 . + CDS 202004 - 203635 1443 ## COG0033 Phosphoglucomutase + Term 203652 - 203694 10.2 - Term 204034 - 204075 0.6 203 97 Tu 1 . - CDS 204113 - 204406 139 ## 204 98 Tu 1 . + CDS 204269 - 204727 607 ## COG0346 Lactoylglutathione lyase and related lyases + Term 204746 - 204792 8.0 + Prom 204779 - 204838 1.9 205 99 Tu 1 . + CDS 204861 - 206198 1433 ## HMPREF0675_4165 hypothetical protein - Term 206198 - 206252 1.5 206 100 Op 1 . - CDS 206261 - 206968 688 ## COG1637 Predicted nuclease of the RecB family 207 100 Op 2 . - CDS 207001 - 207252 158 ## gi|314955732|gb|EFT00134.1| hypothetical protein HMPREF9609_01308 208 101 Tu 1 . + CDS 207345 - 208163 526 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 209 102 Tu 1 . - CDS 208167 - 208937 492 ## COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family - Prom 209014 - 209073 1.8 + Prom 208768 - 208827 2.0 210 103 Op 1 . + CDS 209058 - 210074 816 ## HMPREF0675_4161 hypothetical protein 211 103 Op 2 . + CDS 210110 - 210721 368 ## COG0443 Molecular chaperone + Prom 210823 - 210882 4.4 212 104 Op 1 . + CDS 210923 - 212677 1038 ## COG1289 Predicted membrane protein 213 104 Op 2 . + CDS 212752 - 213324 308 ## COG1739 Uncharacterized conserved protein 214 104 Op 3 . + CDS 213351 - 214280 529 ## COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase 215 105 Op 1 1/0.128 - CDS 214289 - 214978 469 ## COG0775 Nucleoside phosphorylase 216 105 Op 2 . - CDS 215038 - 215658 410 ## COG0009 Putative translation factor (SUA5) 217 105 Op 3 . - CDS 215685 - 216056 169 ## PPA1091 hypothetical protein 218 106 Tu 1 . + CDS 216283 - 217482 1372 ## COG0205 6-phosphofructokinase - Term 217383 - 217417 0.6 219 107 Op 1 . - CDS 217563 - 218714 695 ## COG0477 Permeases of the major facilitator superfamily 220 107 Op 2 . - CDS 218503 - 218922 125 ## 221 107 Op 3 . - CDS 218945 - 220201 1054 ## COG1295 Predicted membrane protein - Term 220261 - 220297 -0.7 222 108 Tu 1 . - CDS 220309 - 220896 586 ## COG0789 Predicted transcriptional regulators 223 109 Op 1 4/0.053 - CDS 221078 - 221557 358 ## COG1259 Uncharacterized conserved protein 224 109 Op 2 4/0.053 - CDS 221588 - 222301 523 ## COG0789 Predicted transcriptional regulators 225 109 Op 3 3/0.074 - CDS 222301 - 222825 441 ## COG1716 FOG: FHA domain 226 109 Op 4 2/0.096 - CDS 222876 - 223268 256 ## COG0509 Glycine cleavage system H protein (lipoate-binding) 227 109 Op 5 5/0.053 - CDS 223345 - 224097 467 ## COG3879 Uncharacterized protein conserved in bacteria 228 109 Op 6 5/0.053 - CDS 224090 - 224422 460 ## COG3856 Uncharacterized conserved protein (small basic protein) 229 109 Op 7 2/0.096 - CDS 224465 - 225208 376 ## COG3879 Uncharacterized protein conserved in bacteria 230 109 Op 8 . - CDS 225229 - 225882 195 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase 231 109 Op 9 3/0.074 - CDS 225928 - 226566 462 ## COG0558 Phosphatidylglycerophosphate synthase 232 109 Op 10 4/0.053 - CDS 226544 - 227104 409 ## COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 233 109 Op 11 . - CDS 227097 - 229151 1856 ## COG0441 Threonyl-tRNA synthetase 234 109 Op 12 19/0.000 - CDS 229240 - 229872 530 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 235 109 Op 13 . - CDS 229869 - 231137 820 ## COG4585 Signal transduction histidine kinase 236 109 Op 14 . - CDS 231134 - 231361 81 ## gi|314918314|gb|EFS82145.1| hypothetical protein HMPREF9598_01291 237 109 Op 15 . - CDS 231358 - 232419 984 ## COG1064 Zn-dependent alcohol dehydrogenases - TRNA 232594 - 232668 78.3 # Val CAC 0 0 + TRNA 233047 - 233119 88.5 # Gly GCC 0 0 + TRNA 233148 - 233218 64.3 # Cys GCA 0 0 + TRNA 233220 - 233291 75.5 # Val GAC 0 0 238 110 Tu 1 . - CDS 233401 - 234255 668 ## COG2326 Uncharacterized conserved protein - Term 234424 - 234465 0.2 239 111 Op 1 . - CDS 234653 - 236107 1094 ## COG1113 Gamma-aminobutyrate permease and related permeases 240 111 Op 2 . - CDS 236112 - 237488 1146 ## COG3033 Tryptophanase 241 111 Op 3 . - CDS 237463 - 237684 80 ## gi|327453913|gb|EGF00568.1| hypothetical protein HMPREF9586_01873 242 112 Tu 1 . + CDS 237709 - 238377 392 ## COG2964 Uncharacterized protein conserved in bacteria + Prom 238404 - 238463 2.6 243 113 Tu 1 . + CDS 238641 - 239414 372 ## PPA1066 hypothetical protein 244 114 Tu 1 . + CDS 239605 - 240051 326 ## COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase 245 115 Op 1 . + CDS 240170 - 240739 443 ## HMPREF0675_4124 hypothetical protein 246 115 Op 2 . + CDS 240736 - 241974 288 ## COG0349 Ribonuclease D 247 116 Tu 1 . - CDS 241990 - 243894 1342 ## COG1154 Deoxyxylulose-5-phosphate synthase - Term 244148 - 244189 11.8 248 117 Tu 1 . - CDS 244195 - 246861 2487 ## COG1048 Aconitase A - Prom 246937 - 246996 2.2 249 118 Op 1 2/0.096 - CDS 247256 - 248437 630 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 250 118 Op 2 . - CDS 248468 - 250492 1299 ## COG0531 Amino acid transporters - Prom 250681 - 250740 2.0 251 119 Op 1 1/0.128 + CDS 250676 - 251338 543 ## COG0569 K+ transport systems, NAD-binding component 252 119 Op 2 . + CDS 251379 - 252038 338 ## COG0569 K+ transport systems, NAD-binding component - Term 252037 - 252083 7.5 253 120 Op 1 . - CDS 252119 - 252511 334 ## HMPREF0675_4116 nucleic acid-binding domain protein 254 120 Op 2 . - CDS 252514 - 253248 833 ## HMPREF0675_4115 hypothetical protein 255 120 Op 3 . - CDS 253292 - 253750 426 ## COG0756 dUTPase 256 120 Op 4 . - CDS 253743 - 254273 220 ## HMPREF0675_4113 hypothetical protein - Prom 254308 - 254367 1.6 257 121 Tu 1 . + CDS 254315 - 254614 300 ## HMPREF0675_4112 hypothetical protein + Term 254633 - 254681 14.2 - Term 254622 - 254670 13.3 258 122 Tu 1 . - CDS 254684 - 254980 308 ## HMPREF0675_4111 hypothetical protein 259 123 Tu 1 . + CDS 255189 - 256268 624 ## HMPREF0675_4110 hypothetical protein 260 124 Op 1 . - CDS 256326 - 256976 528 ## COG1435 Thymidine kinase 261 124 Op 2 . - CDS 256979 - 258106 495 ## COG1524 Uncharacterized proteins of the AP superfamily 262 124 Op 3 . - CDS 258103 - 258843 282 ## HMPREF0675_4106 hypothetical protein 263 125 Op 1 . + CDS 258746 - 259840 526 ## COG4850 Uncharacterized conserved protein 264 125 Op 2 . + CDS 259904 - 262438 2048 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 265 125 Op 3 . + CDS 262477 - 262620 66 ## HMPREF0675_4104 hypothetical protein 266 126 Op 1 . - CDS 262617 - 263960 1008 ## COG2270 Permeases of the major facilitator superfamily 267 126 Op 2 . - CDS 264013 - 265311 1009 ## COG2704 Anaerobic C4-dicarboxylate transporter - Term 265591 - 265622 0.0 268 127 Tu 1 . - CDS 265677 - 267773 2100 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 269 128 Op 1 . + CDS 267652 - 267945 79 ## gi|289427247|ref|ZP_06428963.1| conserved hypothetical protein 270 128 Op 2 . + CDS 267966 - 268196 271 ## HMPREF0675_4100 hypothetical protein 271 129 Tu 1 . - CDS 268273 - 268854 460 ## HMPREF0675_4099 acetyltransferase, GNAT family 272 130 Op 1 . - CDS 268974 - 270248 1398 ## HMPREF0675_4098 hypothetical protein 273 130 Op 2 . - CDS 270326 - 270619 207 ## HMPREF0675_4097 hypothetical protein 274 130 Op 3 . - CDS 270597 - 271379 593 ## PPA1037 hypothetical protein 275 131 Op 1 . - CDS 271519 - 271767 238 ## HMPREF0675_4095 hypothetical protein 276 131 Op 2 . - CDS 271792 - 271944 56 ## HMPREF0675_4094 hypothetical protein 277 132 Tu 1 . + CDS 271910 - 273106 784 ## COG0657 Esterase/lipase 278 133 Tu 1 . - CDS 273050 - 273658 366 ## PPA1034 transcriptional regulator - Prom 273683 - 273742 2.0 279 134 Tu 1 . + CDS 273764 - 276337 1288 ## COG3250 Beta-galactosidase/beta-glucuronidase + Term 276366 - 276405 8.1 280 135 Op 1 . - CDS 276410 - 277930 1608 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 281 135 Op 2 . - CDS 277836 - 278060 97 ## - Prom 278165 - 278224 2.9 + Prom 278023 - 278082 1.9 282 136 Tu 1 . + CDS 278278 - 279216 989 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 283 137 Tu 1 . - CDS 279273 - 280169 447 ## COG1946 Acyl-CoA thioesterase - Term 280275 - 280304 1.2 284 138 Tu 1 . - CDS 280333 - 284418 3064 ## COG1643 HrpA-like helicases 285 139 Op 1 . - CDS 284853 - 285707 584 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins - Term 285718 - 285748 0.7 286 139 Op 2 . - CDS 285791 - 286723 512 ## PPA1027 hypothetical protein - Term 286832 - 286871 6.5 287 140 Op 1 . - CDS 286884 - 289736 2497 ## COG0209 Ribonucleotide reductase, alpha subunit 288 140 Op 2 . - CDS 289818 - 290324 352 ## COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains - Prom 290423 - 290482 3.2 289 141 Tu 1 . - CDS 290549 - 291040 162 ## PPA1024 hypothetical protein 290 142 Tu 1 . + CDS 291167 - 291841 361 ## COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) - Term 291831 - 291867 -0.8 291 143 Op 1 . - CDS 291951 - 294002 1110 ## COG1199 Rad3-related DNA helicases 292 143 Op 2 3/0.074 - CDS 293992 - 295473 618 ## PROTEIN SUPPORTED gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 293 143 Op 3 4/0.053 - CDS 295528 - 296349 555 ## COG0253 Diaminopimelate epimerase 294 143 Op 4 . - CDS 296354 - 297313 746 ## COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase + Prom 297275 - 297334 1.8 295 144 Tu 1 . + CDS 297432 - 297632 335 ## PPA1018 hypothetical protein + Term 297700 - 297745 14.2 - Term 297603 - 297644 1.0 296 145 Op 1 . - CDS 297783 - 299267 535 ## PROTEIN SUPPORTED gi|227395721|ref|ZP_03879044.1| SSU ribosomal protein S12P methylthiotransferase 297 145 Op 2 . - CDS 299328 - 300869 1242 ## COG1288 Predicted membrane protein 298 146 Tu 1 . + CDS 301033 - 301932 524 ## COG2017 Galactose mutarotase and related enzymes 299 147 Tu 1 1/0.128 - CDS 301973 - 303601 1111 ## COG1418 Predicted HD superfamily hydrolase 300 148 Op 1 14/0.000 - CDS 303705 - 304220 211 ## COG2137 Uncharacterized protein conserved in bacteria 301 148 Op 2 . - CDS 304250 - 305296 1055 ## COG0468 RecA/RadA recombinase 302 149 Tu 1 . - CDS 305607 - 305801 196 ## HMPREF0675_4070 hypothetical protein 303 150 Tu 1 . + CDS 306152 - 306955 601 ## COG1349 Transcriptional regulators of sugar metabolism + Term 307077 - 307120 2.7 - Term 306801 - 306834 -0.5 304 151 Tu 1 . - CDS 307057 - 307332 391 ## COG1396 Predicted transcriptional regulators 305 152 Op 1 6/0.032 - CDS 307434 - 307919 228 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase 306 152 Op 2 2/0.096 - CDS 307916 - 308530 678 ## COG0558 Phosphatidylglycerophosphate synthase 307 153 Tu 1 . - CDS 308639 - 310084 1321 ## PROTEIN SUPPORTED gi|229861541|ref|ZP_04481155.1| SSU ribosomal protein S12P methylthiotransferase 308 154 Tu 1 . + CDS 310095 - 310901 551 ## COG3001 Fructosamine-3-kinase 309 155 Op 1 9/0.000 - CDS 311282 - 311932 545 ## COG0461 Orotate phosphoribosyltransferase 310 155 Op 2 5/0.053 - CDS 311960 - 312670 554 ## COG0284 Orotidine-5'-phosphate decarboxylase 311 155 Op 3 13/0.000 - CDS 312696 - 313619 818 ## COG0167 Dihydroorotate dehydrogenase 312 155 Op 4 3/0.074 - CDS 313616 - 314410 417 ## COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 313 155 Op 5 24/0.000 - CDS 314410 - 317616 2940 ## COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) 314 155 Op 6 7/0.011 - CDS 317616 - 318704 835 ## COG0505 Carbamoylphosphate synthase small subunit 315 155 Op 7 15/0.000 - CDS 318701 - 320038 1093 ## COG0044 Dihydroorotase and related cyclic amidohydrolases 316 155 Op 8 8/0.000 - CDS 320035 - 320979 663 ## COG0540 Aspartate carbamoyltransferase, catalytic chain 317 155 Op 9 . - CDS 320976 - 321551 488 ## COG2065 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase 318 156 Tu 1 . - CDS 321703 - 322713 832 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) - Prom 322881 - 322940 2.0 319 157 Tu 1 . + CDS 322758 - 323339 446 ## COG1335 Amidases related to nicotinamidase 320 158 Tu 1 . + CDS 323613 - 323858 216 ## COG1472 Beta-glucosidase-related glycosidases + Term 323875 - 323908 3.3 321 159 Op 1 . - CDS 323870 - 324325 389 ## PPA0991 hypothetical protein 322 159 Op 2 . - CDS 324379 - 325287 394 ## PPA0990 endo-beta-N-acetylglucosaminidase H (EC:3.2.1.96) - Prom 325359 - 325418 5.1 - Term 325395 - 325439 8.1 323 160 Tu 1 . - CDS 325459 - 328212 2606 ## COG2609 Pyruvate dehydrogenase complex, dehydrogenase (E1) component - Prom 328296 - 328355 2.3 324 161 Tu 1 . + CDS 328574 - 329695 645 ## COG2508 Regulator of polyketide synthase expression 325 162 Tu 1 . - CDS 329724 - 331169 1019 ## COG0477 Permeases of the major facilitator superfamily 326 163 Tu 1 . + CDS 331332 - 331697 282 ## PPA0986 hypothetical protein + Term 331828 - 331862 -1.0 327 164 Op 1 . + CDS 332364 - 332609 169 ## PPA0985 2-dehydropantoate 2-reductase (EC:1.1.1.169) 328 164 Op 2 14/0.000 + CDS 332669 - 333670 835 ## COG0331 (acyl-carrier-protein) S-malonyltransferase 329 164 Op 3 6/0.032 + CDS 333667 - 334665 890 ## COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III 330 164 Op 4 27/0.000 + CDS 334748 - 334993 416 ## COG0236 Acyl carrier protein 331 164 Op 5 . + CDS 335067 - 336338 1177 ## COG0304 3-oxoacyl-(acyl-carrier-protein) synthase + Term 336342 - 336399 14.3 - Term 336209 - 336238 0.1 332 165 Op 1 . - CDS 336424 - 336921 129 ## HMPREF0675_4040 hypothetical protein 333 165 Op 2 . - CDS 336999 - 337715 516 ## COG0325 Predicted enzyme with a TIM-barrel fold 334 165 Op 3 5/0.053 - CDS 337764 - 338717 567 ## COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain 335 165 Op 4 3/0.074 - CDS 338717 - 339685 608 ## COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain 336 165 Op 5 23/0.000 - CDS 339682 - 340725 793 ## COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 337 165 Op 6 . - CDS 340736 - 341794 824 ## COG0714 MoxR-like ATPases 338 165 Op 7 . - CDS 341851 - 342108 127 ## HMPREF0675_4034 hypothetical protein 339 166 Op 1 . + CDS 342006 - 342938 200 ## PPA2378 hypothetical protein 340 166 Op 2 . + CDS 342938 - 343735 717 ## COG0561 Predicted hydrolases of the HAD superfamily - Term 343866 - 343901 0.2 341 167 Op 1 . - CDS 343908 - 344228 58 ## gi|314984008|gb|EFT28100.1| hypothetical protein HMPREF9594_02233 342 167 Op 2 . - CDS 344182 - 344349 92 ## gi|332675369|gb|AEE72185.1| hypothetical protein PAZ_c10100 + Prom 344100 - 344159 3.2 343 168 Tu 1 . + CDS 344281 - 344526 143 ## PPA0972 hypothetical protein - TRNA 344818 - 344891 85.0 # Met CAT 0 0 344 169 Tu 1 . - CDS 344853 - 345038 133 ## PPA0971 hypothetical protein 345 170 Tu 1 . - CDS 345325 - 345558 75 ## gi|313792208|gb|EFS40309.1| hypothetical protein HMPREF9575_02198 346 171 Op 1 . - CDS 345701 - 347062 1204 ## COG0531 Amino acid transporters 347 171 Op 2 12/0.000 - CDS 347059 - 347763 499 ## COG0132 Dethiobiotin synthetase 348 171 Op 3 . - CDS 347760 - 349031 897 ## COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 349 172 Op 1 16/0.000 - CDS 349183 - 349788 400 ## COG0311 Predicted glutamine amidotransferase involved in pyridoxine biosynthesis 350 172 Op 2 . - CDS 349790 - 350704 810 ## COG0214 Pyridoxine biosynthesis enzyme 351 173 Tu 1 . + CDS 350875 - 352191 553 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 352 174 Tu 1 . - CDS 352253 - 353188 768 ## PROTEIN SUPPORTED gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 + Prom 353351 - 353410 1.6 353 175 Tu 1 . + CDS 353451 - 353687 131 ## gi|313792218|gb|EFS40319.1| hypothetical protein HMPREF9575_02208 354 176 Tu 1 . - CDS 353734 - 354774 740 ## COG1877 Trehalose-6-phosphatase 355 177 Op 1 1/0.128 + CDS 354752 - 356155 1403 ## COG0380 Trehalose-6-phosphate synthase 356 177 Op 2 . + CDS 356197 - 357177 658 ## COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - TRNA 357322 - 357394 80.9 # Asn GTT 0 0 357 178 Op 1 . - CDS 357491 - 357997 372 ## HMPREF0675_4016 hypothetical protein 358 178 Op 2 31/0.000 - CDS 358011 - 358823 382 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) - Term 358860 - 358902 5.0 359 178 Op 3 . - CDS 358910 - 360763 1405 ## COG0358 DNA primase (bacterial type) 360 179 Tu 1 . + CDS 360671 - 361579 760 ## COG0390 ABC-type uncharacterized transport system, permease component - Term 361543 - 361580 5.0 361 180 Op 1 . - CDS 361599 - 362717 686 ## COG0232 dGTP triphosphohydrolase 362 180 Op 2 . - CDS 362766 - 363995 447 ## PROTEIN SUPPORTED gi|148828154|ref|YP_001292907.1| ribosomal protein L11 methyltransferase 363 181 Tu 1 . + CDS 364049 - 365815 1147 ## COG0778 Nitroreductase 364 182 Op 1 36/0.000 - CDS 366014 - 366772 526 ## COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit 365 182 Op 2 . - CDS 366769 - 368901 1513 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 366 182 Op 3 . - CDS 368898 - 369668 566 ## PPA0950 putative succinate dehydrogenase subunit C 367 183 Tu 1 . - CDS 369808 - 371328 1442 ## COG0423 Glycyl-tRNA synthetase (class II) + Prom 371270 - 371329 2.6 368 184 Tu 1 . + CDS 371421 - 371837 297 ## COG0735 Fe2+/Zn2+ uptake regulation proteins 369 185 Tu 1 . - CDS 371838 - 372509 503 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - Prom 372588 - 372647 1.5 + Prom 372668 - 372727 1.6 370 186 Op 1 . + CDS 372853 - 373038 177 ## HMPREF0675_4002 hypothetical protein 371 186 Op 2 . + CDS 373092 - 374255 526 ## PPA0945 putative histidine kinase - Term 374258 - 374286 -0.9 372 187 Tu 1 . - CDS 374353 - 375093 448 ## COG1381 Recombinational DNA repair protein (RecF pathway) 373 188 Tu 1 . + CDS 375216 - 375881 599 ## PPA0943 hypothetical protein 374 189 Tu 1 . + CDS 375983 - 376789 675 ## COG0020 Undecaprenyl pyrophosphate synthase 375 190 Tu 1 . - CDS 376798 - 378543 1307 ## COG0119 Isopropylmalate/homocitrate/citramalate synthases + Prom 378510 - 378569 1.6 376 191 Tu 1 . + CDS 378745 - 380235 721 ## COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold 377 192 Op 1 1/0.128 - CDS 380264 - 381286 849 ## COG1159 GTPase 378 192 Op 2 13/0.000 - CDS 381279 - 382577 1037 ## COG1253 Hemolysins and related proteins containing CBS domains 379 192 Op 3 17/0.000 - CDS 382574 - 383041 427 ## COG0319 Predicted metal-dependent hydrolase 380 192 Op 4 . - CDS 383038 - 383982 839 ## COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase 381 193 Op 1 . + CDS 384325 - 385284 276 ## HMPREF0675_3991 hypothetical protein 382 193 Op 2 . + CDS 385304 - 385717 303 ## HMPREF0675_3990 hypothetical protein 383 193 Op 3 . + CDS 385771 - 385920 68 ## - Term 385563 - 385605 -0.5 384 194 Tu 1 . - CDS 385851 - 386858 1001 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 385 195 Tu 1 . + CDS 386830 - 387648 729 ## COG1738 Uncharacterized conserved protein 386 196 Op 1 9/0.000 - CDS 387830 - 389041 861 ## COG1668 ABC-type Na+ efflux pump, permease component 387 196 Op 2 . - CDS 389038 - 389970 265 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 388 196 Op 3 19/0.000 - CDS 390055 - 390711 674 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 389 196 Op 4 . - CDS 390711 - 392060 833 ## COG4585 Signal transduction histidine kinase 390 196 Op 5 . - CDS 392108 - 393349 1000 ## COG0343 Queuine/archaeosine tRNA-ribosyltransferase + Prom 393308 - 393367 2.1 391 197 Op 1 . + CDS 393436 - 394287 704 ## COG5006 Predicted permease, DMT superfamily 392 197 Op 2 . + CDS 394330 - 395547 977 ## COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) 393 197 Op 3 . + CDS 395630 - 397780 952 ## COG0514 Superfamily II DNA helicase 394 197 Op 4 . + CDS 397942 - 398343 417 ## COG2259 Predicted membrane protein + Term 398371 - 398421 14.5 - Term 398359 - 398409 14.5 395 198 Tu 1 . - CDS 398416 - 398652 60 ## gi|328754319|gb|EGF67935.1| hypothetical protein HMPREF9579_01988 + Prom 398422 - 398481 2.9 396 199 Op 1 2/0.096 + CDS 398534 - 400441 1531 ## COG2213 Phosphotransferase system, mannitol-specific IIBC component 397 199 Op 2 . + CDS 400470 - 401516 956 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases - Term 401488 - 401527 3.5 398 200 Op 1 4/0.053 - CDS 401533 - 402273 537 ## COG1385 Uncharacterized protein conserved in bacteria 399 200 Op 2 3/0.074 - CDS 402270 - 403448 764 ## COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain 400 200 Op 3 . - CDS 403452 - 404471 732 ## COG1420 Transcriptional regulator of heat shock gene 401 201 Tu 1 . + CDS 404616 - 405287 466 ## COG0491 Zn-dependent hydrolases, including glyoxylases - Term 405241 - 405304 2.7 402 202 Op 1 . - CDS 405306 - 406067 427 ## COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family 403 202 Op 2 . - CDS 406064 - 406861 531 ## HMPREF0675_3970 hypothetical protein - Term 406960 - 406985 -0.5 404 203 Tu 1 . - CDS 407015 - 408196 641 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases + Prom 408393 - 408452 1.7 405 204 Tu 1 . + CDS 408595 - 408810 122 ## gi|315108458|gb|EFT80434.1| hypothetical protein HMPREF9602_02058 406 205 Op 1 6/0.032 - CDS 408871 - 409782 816 ## COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases 407 205 Op 2 6/0.032 - CDS 409692 - 410087 229 ## COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases 408 205 Op 3 . - CDS 410147 - 410524 339 ## COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases + Prom 410833 - 410892 1.8 409 206 Op 1 . + CDS 410979 - 411500 571 ## COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) 410 206 Op 2 2/0.096 + CDS 411525 - 412514 1013 ## COG0447 Dihydroxynaphthoic acid synthase 411 206 Op 3 . + CDS 412456 - 413706 808 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 412 207 Tu 1 . - CDS 413774 - 414100 96 ## gi|328754412|gb|EGF68028.1| hypothetical protein HMPREF9588_01893 + Prom 414144 - 414203 1.8 413 208 Tu 1 . + CDS 414320 - 415525 767 ## COG1169 Isochorismate synthase 414 209 Op 1 1/0.128 - CDS 415498 - 417024 790 ## COG1165 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 415 209 Op 2 . - CDS 417026 - 417994 366 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 416 209 Op 3 . - CDS 418030 - 419865 1548 ## COG0481 Membrane GTPase LepA 417 210 Tu 1 . + CDS 419993 - 421906 1033 ## COG0366 Glycosidases 418 211 Tu 1 . + CDS 422027 - 422293 418 ## PROTEIN SUPPORTED gi|50842384|ref|YP_055611.1| 30S ribosomal protein S20 + Term 422332 - 422373 8.3 419 212 Tu 1 . - CDS 422415 - 423437 780 ## COG1466 DNA polymerase III, delta subunit - Prom 423562 - 423621 2.6 - Term 423634 - 423674 0.1 420 213 Op 1 . - CDS 423828 - 425570 1226 ## COG1061 DNA or RNA helicases of superfamily II 421 213 Op 2 4/0.053 - CDS 425667 - 428021 869 ## COG2333 Predicted hydrolase (metallo-beta-lactamase superfamily) 422 213 Op 3 . - CDS 428008 - 428859 298 ## COG1555 DNA uptake protein and related DNA-binding proteins - Term 428896 - 428950 7.6 423 214 Tu 1 . - CDS 428983 - 431463 2081 ## COG0495 Leucyl-tRNA synthetase 424 215 Tu 1 . + CDS 431653 - 432441 820 ## COG1814 Uncharacterized membrane protein 425 216 Tu 1 . - CDS 432451 - 433473 256 ## HMPREF0675_3949 hypothetical protein 426 217 Tu 1 . + CDS 433613 - 434167 271 ## PPA0889 putative glucoamylase S1/S2 precursor 427 218 Op 1 . - CDS 434236 - 435942 1468 ## COG0281 Malic enzyme 428 218 Op 2 . - CDS 435985 - 436953 908 ## COG0039 Malate/lactate dehydrogenases 429 219 Op 1 6/0.032 - CDS 437066 - 437716 542 ## COG0352 Thiamine monophosphate synthase 430 219 Op 2 . - CDS 437703 - 438512 495 ## COG2145 Hydroxyethylthiazole kinase, sugar kinase family 431 220 Tu 1 . + CDS 438334 - 438717 108 ## - Term 438913 - 438948 -0.7 432 221 Op 1 4/0.053 - CDS 439131 - 440489 1276 ## COG0477 Permeases of the major facilitator superfamily 433 221 Op 2 . - CDS 440524 - 441474 880 ## COG0524 Sugar kinases, ribokinase family 434 221 Op 3 8/0.000 - CDS 441471 - 442139 570 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 435 221 Op 4 9/0.000 - CDS 442227 - 443114 574 ## COG3623 Putative L-xylulose-5-phosphate 3-epimerase 436 221 Op 5 . - CDS 443111 - 443764 604 ## COG0269 3-hexulose-6-phosphate synthase and related proteins 437 221 Op 6 . - CDS 443770 - 444762 1146 ## COG1735 Predicted metal-dependent hydrolase with the TIM-barrel fold - Prom 444869 - 444928 1.9 + Prom 444828 - 444887 2.2 438 222 Tu 1 . + CDS 444944 - 445888 416 ## COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain + Term 445943 - 445998 1.1 + Prom 446227 - 446286 2.2 439 223 Op 1 . + CDS 446315 - 446743 235 ## PPA2399 transcriptional repressor, MarR family 440 223 Op 2 . + CDS 446736 - 449075 796 ## COG0178 Excinuclease ATPase subunit - Term 449151 - 449186 -0.7 441 224 Tu 1 . - CDS 449379 - 449546 129 ## HMPREF0675_3932 hypothetical protein 442 225 Op 1 . - CDS 449608 - 449847 57 ## COG3464 Transposase and inactivated derivatives 443 225 Op 2 . - CDS 449867 - 450106 66 ## gi|314987615|gb|EFT31706.1| hypothetical protein HMPREF9595_00770 444 225 Op 3 . - CDS 450106 - 450345 136 ## PPA0875 GntR family regulatory protein - Term 450689 - 450734 -0.7 445 226 Tu 1 . - CDS 450826 - 450999 118 ## HMPREF0675_3929 hypothetical protein - Prom 451088 - 451147 2.6 446 227 Op 1 . + CDS 450914 - 451258 168 ## HMPREF0675_3928 hypothetical protein 447 227 Op 2 . + CDS 451292 - 451597 224 ## COG5441 Uncharacterized conserved protein 448 228 Op 1 . + CDS 451790 - 452905 733 ## HMPREF0675_3926 hypothetical protein 449 228 Op 2 . + CDS 452902 - 453264 187 ## HMPREF0675_3925 hypothetical protein 450 229 Op 1 . - CDS 453316 - 453492 97 ## HMPREF0675_3924 hypothetical protein 451 229 Op 2 2/0.096 - CDS 453558 - 454241 578 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 452 229 Op 3 . - CDS 454256 - 455455 601 ## COG4564 Signal transduction histidine kinase 453 230 Tu 1 . + CDS 455569 - 456321 286 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 454 231 Tu 1 . + CDS 456612 - 458174 979 ## HMPREF0675_3920 efflux ABC transporter, permease protein + Term 458177 - 458240 -0.2 455 232 Tu 1 . - CDS 458159 - 458497 157 ## gi|313764634|gb|EFS35998.1| hypothetical protein HMPREF9567_01485 456 233 Op 1 . + CDS 458560 - 458961 80 ## 457 233 Op 2 2/0.096 + CDS 458859 - 459059 95 ## COG3328 Transposase and inactivated derivatives 458 234 Tu 1 . + CDS 459160 - 459342 148 ## COG3328 Transposase and inactivated derivatives 459 235 Op 1 . - CDS 459468 - 459974 322 ## HMPREF0675_3917 hypothetical protein 460 235 Op 2 . - CDS 459977 - 460195 102 ## HMPREF0675_3916 hypothetical protein 461 235 Op 3 . - CDS 460199 - 460486 105 ## HMPREF0675_3915 hypothetical protein 462 236 Op 1 . + CDS 460673 - 461230 218 ## HMPREF0675_3914 hypothetical protein 463 236 Op 2 . + CDS 461276 - 461500 123 ## gi|313764641|gb|EFS36005.1| hypothetical protein HMPREF9567_01492 464 237 Op 1 3/0.074 + CDS 461705 - 462238 232 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains 465 237 Op 2 . + CDS 462189 - 462566 113 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains 466 238 Op 1 . - CDS 462874 - 463194 96 ## HMPREF0675_3910 hypothetical protein 467 238 Op 2 . - CDS 463272 - 463400 64 ## HMPREF0675_3909 hypothetical protein 468 238 Op 3 . - CDS 463437 - 463673 183 ## HMPREF0675_3908 hypothetical protein 469 239 Op 1 . - CDS 463788 - 464135 265 ## HMPREF0675_3907 hypothetical protein 470 239 Op 2 . - CDS 464105 - 464317 186 ## HMPREF0675_3906 hypothetical protein 471 239 Op 3 . - CDS 464401 - 464661 109 ## gi|313764650|gb|EFS36014.1| conserved domain protein 472 240 Tu 1 . + CDS 465487 - 466164 77 ## HMPREF0675_3905 hypothetical protein + Term 466352 - 466384 -1.0 - TRNA 466345 - 466417 81.5 # Ala GGC 0 0 - Term 466412 - 466437 -0.8 473 241 Tu 1 6/0.032 - CDS 466486 - 467073 348 ## COG0406 Fructose-2,6-bisphosphatase 474 242 Op 1 14/0.000 - CDS 467154 - 467558 205 ## COG0799 Uncharacterized homolog of plant Iojap protein 475 242 Op 2 . - CDS 467555 - 468223 416 ## COG1057 Nicotinic acid mononucleotide adenylyltransferase 476 242 Op 3 . - CDS 468223 - 468345 84 ## 477 242 Op 4 22/0.000 - CDS 468393 - 469634 941 ## COG0014 Gamma-glutamyl phosphate reductase 478 242 Op 5 7/0.011 - CDS 469689 - 470864 437 ## COG0263 Glutamate 5-kinase 479 242 Op 6 . - CDS 470857 - 472374 1178 ## COG0536 Predicted GTPase - Term 472382 - 472412 -0.6 480 243 Tu 1 . - CDS 472477 - 474240 1547 ## COG0477 Permeases of the major facilitator superfamily 481 244 Tu 1 . - CDS 474335 - 474943 311 ## HMPREF0675_3895 transcriptional regulator, TetR family 482 245 Tu 1 . - CDS 475044 - 475352 77 ## HMPREF0675_3894 hypothetical protein - Term 475834 - 475873 12.1 483 246 Op 1 32/0.000 - CDS 475894 - 476163 462 ## PROTEIN SUPPORTED gi|50842315|ref|YP_055542.1| 50S ribosomal protein L27 484 246 Op 2 4/0.053 - CDS 476175 - 476513 506 ## PROTEIN SUPPORTED gi|213959551|ref|ZP_03387834.1| ribosomal protein L21 - Prom 476573 - 476632 5.7 - Term 476535 - 476573 -0.2 485 247 Tu 1 2/0.096 - CDS 476644 - 479268 2264 ## COG1530 Ribonucleases G and E 486 248 Op 1 1/0.128 - CDS 479541 - 480275 587 ## COG5011 Uncharacterized protein conserved in bacteria 487 248 Op 2 . - CDS 480278 - 482230 1182 ## COG1032 Fe-S oxidoreductase 488 248 Op 3 . - CDS 482276 - 482692 364 ## COG0105 Nucleoside diphosphate kinase 489 248 Op 4 . - CDS 482726 - 483046 358 ## PPA0822 hypothetical protein 490 248 Op 5 . - CDS 483109 - 484554 1062 ## COG0285 Folylpolyglutamate synthase 491 248 Op 6 . - CDS 484551 - 484907 369 ## HMPREF0675_3885 hypothetical protein - Term 484924 - 484950 -1.0 492 249 Op 1 9/0.000 - CDS 485025 - 485324 285 ## COG1314 Preprotein translocase subunit SecG 493 249 Op 2 13/0.000 - CDS 485425 - 486204 904 ## COG0149 Triosephosphate isomerase 494 249 Op 3 26/0.000 - CDS 486204 - 487412 1304 ## COG0126 3-phosphoglycerate kinase 495 249 Op 4 1/0.128 - CDS 487535 - 488542 1195 ## COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase - Prom 488588 - 488647 2.7 - Term 488597 - 488638 1.4 496 250 Op 1 12/0.000 - CDS 488776 - 489765 481 ## COG1481 Uncharacterized protein conserved in bacteria 497 250 Op 2 12/0.000 - CDS 489822 - 490784 674 ## COG0391 Uncharacterized conserved protein 498 250 Op 3 5/0.053 - CDS 490787 - 491662 652 ## COG1660 Predicted P-loop-containing kinase 499 250 Op 4 . - CDS 491679 - 493697 1533 ## COG0322 Nuclease subunit of the excinuclease complex 500 251 Tu 1 . - CDS 493890 - 495539 535 ## HMPREF0675_3876 hypothetical protein 501 252 Op 1 . + CDS 495716 - 496462 525 ## COG0406 Fructose-2,6-bisphosphatase 502 252 Op 2 . + CDS 496478 - 496885 389 ## COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 503 253 Tu 1 . - CDS 496900 - 499869 2178 ## COG0178 Excinuclease ATPase subunit - Prom 499936 - 499995 2.8 + Prom 499900 - 499959 2.2 504 254 Op 1 . + CDS 500011 - 500754 464 ## HMPREF0675_3873 hypothetical protein 505 254 Op 2 . + CDS 500800 - 501456 433 ## COG0491 Zn-dependent hydrolases, including glyoxylases - Term 501336 - 501370 0.3 506 255 Tu 1 . - CDS 501465 - 502454 850 ## COG0861 Membrane protein TerC, possibly involved in tellurium resistance 507 256 Tu 1 . - CDS 502648 - 504753 1770 ## COG0556 Helicase subunit of the DNA excision repair complex - Prom 504978 - 505037 1.8 508 257 Tu 1 . + CDS 504865 - 505209 170 ## PPA0802 hypothetical protein 509 258 Tu 1 . - CDS 505616 - 505855 106 ## gi|314925323|gb|EFS89154.1| hypothetical protein HMPREF9606_01686 - Prom 505985 - 506044 1.8 + Prom 505567 - 505626 2.2 510 259 Tu 1 . + CDS 505854 - 506792 341 ## HMPREF0675_3868 hypothetical protein + Term 506949 - 506994 -0.7 511 260 Tu 1 . + CDS 507022 - 507324 113 ## PPA0798 putative permease 512 261 Tu 1 . - CDS 507166 - 507624 172 ## - Term 507908 - 507968 2.5 513 262 Tu 1 . - CDS 507995 - 508345 202 ## PPA0784 ABC-type transport system, fused ATPase and permease 514 263 Tu 1 . - CDS 508581 - 508820 101 ## PPA2406 hypothetical protein - Prom 508869 - 508928 4.2 + Prom 508545 - 508604 2.1 515 264 Tu 1 . + CDS 508738 - 509751 508 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 516 265 Op 1 . + CDS 510168 - 511601 234 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 517 265 Op 2 . + CDS 511598 - 515431 1247 ## COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatases 518 266 Op 1 . + CDS 515587 - 516000 315 ## HMPREF0675_3860 hypothetical protein 519 266 Op 2 4/0.053 + CDS 516000 - 517802 78 ## COG1240 Mg-chelatase subunit ChlD 520 266 Op 3 . + CDS 517804 - 518784 306 ## COG1239 Mg-chelatase subunit ChlI - Term 519158 - 519215 10.2 521 267 Tu 1 . - CDS 519244 - 520815 570 ## HMPREF0675_3857 HtaA - Prom 521019 - 521078 3.2 522 268 Op 1 . - CDS 521333 - 522040 571 ## COG0237 Dephospho-CoA kinase 523 268 Op 2 14/0.000 - CDS 522069 - 523739 948 ## COG4987 ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components 524 268 Op 3 . - CDS 523736 - 525466 214 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 525 268 Op 4 10/0.000 - CDS 525469 - 526248 203 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 526 268 Op 5 8/0.000 - CDS 526245 - 527306 770 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 527 268 Op 6 . - CDS 527303 - 528415 720 ## COG4558 ABC-type hemin transport system, periplasmic component 528 269 Tu 1 . - CDS 528528 - 529931 921 ## HMPREF0675_3848 HtaA - Term 530086 - 530130 16.0 529 270 Tu 1 . - CDS 530152 - 531648 2531 ## PROTEIN SUPPORTED gi|50842265|ref|YP_055492.1| 30S ribosomal protein S1 530 271 Op 1 . + CDS 531973 - 532749 650 ## HMPREF0675_3846 sortase family protein 531 271 Op 2 15/0.000 + CDS 532829 - 535033 1103 ## COG0277 FAD/FMN-containing dehydrogenases 532 271 Op 3 . + CDS 534973 - 535671 271 ## PROTEIN SUPPORTED gi|167010850|ref|ZP_02275781.1| ribosomal protein L36, putative 533 272 Tu 1 . - CDS 535834 - 538581 2165 ## COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains 534 273 Tu 1 . + CDS 538584 - 538997 176 ## COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism - Term 538912 - 538954 7.1 535 274 Tu 1 . - CDS 539017 - 539664 677 ## COG3707 Response regulator with putative antiterminator output domain - Prom 539853 - 539912 80.3 + TRNA 539827 - 539912 66.0 # Leu CAA 0 0 - Term 539807 - 539876 18.4 536 275 Op 1 . - CDS 539918 - 540283 306 ## HMPREF0675_3839 putative CrcB protein 537 275 Op 2 . - CDS 540286 - 540717 182 ## PROTEIN SUPPORTED gi|148985194|ref|ZP_01818433.1| 50S ribosomal protein L19 - Term 540933 - 540975 11.7 538 276 Op 1 . - CDS 540999 - 542375 1632 ## COG0469 Pyruvate kinase 539 276 Op 2 15/0.000 - CDS 542550 - 543470 439 ## COG0564 Pseudouridylate synthases, 23S RNA-specific 540 276 Op 3 . - CDS 543512 - 544009 278 ## COG0597 Lipoprotein signal peptidase 541 276 Op 4 . - CDS 544024 - 544446 371 ## HMPREF0675_3834 C4-type zinc finger protein, DksA/TraR family - Prom 544497 - 544556 1.9 - Term 544599 - 544646 13.0 542 277 Op 1 . - CDS 544667 - 545752 943 ## PPA0765 putative immunogenic protein antigen 84 543 277 Op 2 . - CDS 545905 - 546195 342 ## HMPREF0675_3832 YGGT family protein 544 277 Op 3 . - CDS 546206 - 546724 578 ## COG1799 Uncharacterized protein conserved in bacteria 545 278 Op 1 5/0.053 - CDS 546851 - 547636 430 ## COG1496 Uncharacterized conserved protein 546 278 Op 2 6/0.032 - CDS 547638 - 548891 865 ## COG0206 Cell division GTPase 547 279 Op 1 5/0.053 - CDS 549014 - 549727 239 ## PROTEIN SUPPORTED gi|88856514|ref|ZP_01131171.1| 50S ribosomal protein L6 548 279 Op 2 26/0.000 - CDS 549727 - 551142 1248 ## COG0773 UDP-N-acetylmuramate-alanine ligase 549 279 Op 3 31/0.000 - CDS 551154 - 552272 600 ## COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase 550 279 Op 4 25/0.000 - CDS 552315 - 553637 745 ## COG0772 Bacterial cell division membrane protein 551 279 Op 5 28/0.000 - CDS 553597 - 555093 1052 ## COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase 552 279 Op 6 28/0.000 - CDS 555075 - 556145 934 ## COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 553 279 Op 7 26/0.000 - CDS 556142 - 557599 825 ## COG0770 UDP-N-acetylmuramyl pentapeptide synthase 554 279 Op 8 26/0.000 - CDS 557596 - 559185 1015 ## COG0769 UDP-N-acetylmuramyl tripeptide synthase 555 279 Op 9 . - CDS 559182 - 560969 1238 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 556 280 Op 1 . - CDS 561104 - 561568 494 ## HMPREF0675_3819 putative cell division protein FtsL 557 280 Op 2 29/0.000 - CDS 561565 - 562572 862 ## COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis 558 280 Op 3 . - CDS 562721 - 563149 454 ## COG2001 Uncharacterized protein conserved in bacteria 559 281 Tu 1 . + CDS 563425 - 564468 530 ## COG0714 MoxR-like ATPases 560 282 Op 1 . + CDS 564690 - 565691 576 ## HMPREF0675_3815 hypothetical protein 561 282 Op 2 . + CDS 565649 - 567901 880 ## COG1305 Transglutaminase-like enzymes, putative cysteine proteases 562 283 Tu 1 . - CDS 567928 - 568356 187 ## HMPREF0675_3813 hypothetical protein 563 284 Op 1 18/0.000 + CDS 568564 - 569598 949 ## COG0404 Glycine cleavage system T protein (aminomethyltransferase) 564 284 Op 2 12/0.000 + CDS 569639 - 570010 485 ## COG0509 Glycine cleavage system H protein (lipoate-binding) 565 284 Op 3 . + CDS 570016 - 573000 2341 ## COG1003 Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain + Term 573008 - 573063 22.0 - Term 572858 - 572908 5.4 566 285 Tu 1 . - CDS 573065 - 573784 487 ## COG2186 Transcriptional regulators - Prom 573894 - 573953 4.6 - Term 573788 - 573826 -0.9 567 286 Tu 1 . - CDS 573955 - 574194 289 ## HMPREF0675_3808 hypothetical protein 568 287 Tu 1 . + CDS 574428 - 575069 696 ## COG2610 H+/gluconate symporter and related permeases 569 288 Tu 1 . - CDS 575142 - 575600 563 ## COG0071 Molecular chaperone (small heat shock protein) - Prom 575656 - 575715 4.2 570 289 Tu 1 . - CDS 575721 - 576515 425 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 571 290 Op 1 . + CDS 576336 - 577667 523 ## PPA0734 putative carotenoid dehydrogenase 572 290 Op 2 . + CDS 577714 - 579975 1422 ## COG3973 Superfamily I DNA and RNA helicases - Term 579874 - 579907 2.1 573 291 Tu 1 . - CDS 580029 - 580358 274 ## COG0685 5,10-methylenetetrahydrofolate reductase 574 292 Tu 1 . + CDS 580576 - 581673 652 ## COG0142 Geranylgeranyl pyrophosphate synthase 575 293 Op 1 . - CDS 581698 - 582096 341 ## HMPREF0675_3800 hypothetical protein 576 293 Op 2 . - CDS 582093 - 582536 229 ## COG4290 Guanyl-specific ribonuclease Sa 577 294 Op 1 . + CDS 582663 - 584075 499 ## COG0515 Serine/threonine protein kinase + Term 584082 - 584133 -0.4 578 294 Op 2 . + CDS 584173 - 585081 944 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 579 295 Tu 1 . - CDS 585097 - 585744 452 ## COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold 580 296 Op 1 . - CDS 585848 - 587242 1115 ## COG3200 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 581 296 Op 2 . - CDS 587340 - 588059 349 ## HMPREF0675_3794 hypothetical protein 582 296 Op 3 . - CDS 588064 - 588819 697 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase 583 297 Tu 1 . + CDS 588879 - 589286 238 ## HMPREF0675_3792 hypothetical protein 584 298 Op 1 . - CDS 589291 - 590361 427 ## PROTEIN SUPPORTED gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 585 298 Op 2 . - CDS 590368 - 591525 189 ## PROTEIN SUPPORTED gi|167856514|ref|ZP_02479226.1| 50S ribosomal protein L1 586 299 Tu 1 . + CDS 591813 - 593576 775 ## COG0322 Nuclease subunit of the excinuclease complex 587 300 Tu 1 . - CDS 593496 - 594140 457 ## PPA0719 hypothetical protein - Prom 594183 - 594242 1.6 588 301 Tu 1 . - CDS 594258 - 594770 584 ## COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 589 302 Tu 1 . + CDS 594822 - 596069 1092 ## HMPREF0675_3787 hypothetical protein + Term 596138 - 596171 -0.9 + Prom 596234 - 596293 2.4 590 303 Op 1 . + CDS 596395 - 596874 339 ## PPA0716 hypothetical protein 591 303 Op 2 . + CDS 596884 - 597594 344 ## HMPREF0675_3785 hypothetical protein 592 304 Tu 1 . - CDS 597581 - 597730 90 ## HMPREF0675_3784 hypothetical protein 593 305 Tu 1 . - CDS 597878 - 598309 394 ## COG0784 FOG: CheY-like receiver - Prom 598454 - 598513 2.0 + Prom 598495 - 598554 2.9 594 306 Op 1 4/0.053 + CDS 598656 - 599249 554 ## COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3 595 306 Op 2 4/0.053 + CDS 599281 - 600084 652 ## COG2010 Cytochrome c, mono- and diheme variants 596 306 Op 3 28/0.000 + CDS 600051 - 601133 776 ## COG0723 Rieske Fe-S protein 597 306 Op 4 . + CDS 601133 - 602812 1426 ## COG1290 Cytochrome b subunit of the bc complex - Term 602718 - 602762 -0.5 598 307 Tu 1 . - CDS 602861 - 603178 205 ## COG3695 Predicted methylated DNA-protein cysteine methyltransferase - Prom 603268 - 603327 1.6 599 308 Op 1 . + CDS 603217 - 604698 909 ## COG0516 IMP dehydrogenase/GMP reductase 600 308 Op 2 . + CDS 604763 - 605419 480 ## COG0702 Predicted nucleoside-diphosphate-sugar epimerases 601 309 Tu 1 . + CDS 605945 - 606232 165 ## gi|314979285|gb|EFT23379.1| hypothetical protein HMPREF9573_01382 + Prom 606373 - 606432 1.6 602 310 Tu 1 . + CDS 606479 - 606700 124 ## gi|289426867|ref|ZP_06428593.1| conserved hypothetical protein + Prom 606710 - 606769 57.5 603 311 Op 1 . + CDS 606805 - 607431 265 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 604 311 Op 2 . + CDS 607428 - 609866 343 ## PPA0704 hypothetical protein + Term 610105 - 610160 4.0 - Term 609863 - 609916 7.5 605 312 Op 1 . - CDS 609918 - 610313 512 ## HMPREF0675_3772 hypothetical protein 606 312 Op 2 25/0.000 - CDS 610313 - 612031 1611 ## COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1 607 312 Op 3 . - CDS 612028 - 612741 694 ## COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2 - Term 613013 - 613066 14.7 608 313 Op 1 . - CDS 613117 - 613470 399 ## COG0316 Uncharacterized conserved protein 609 313 Op 2 . - CDS 613641 - 613931 392 ## HMPREF0675_3768 hypothetical protein 610 313 Op 3 . - CDS 613928 - 614731 890 ## COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription - Prom 614800 - 614859 1.7 + Prom 614800 - 614859 1.6 611 314 Op 1 . + CDS 614930 - 615685 483 ## HMPREF0675_3766 hypothetical protein 612 314 Op 2 . + CDS 615729 - 615947 243 ## HMPREF0675_3765 hypothetical protein - Term 615876 - 615908 -0.9 613 315 Tu 1 . - CDS 615917 - 616396 308 ## PPA0695 hypothetical protein 614 316 Op 1 . + CDS 616431 - 617957 1509 ## COG0260 Leucyl aminopeptidase 615 316 Op 2 . + CDS 618118 - 619851 1674 ## COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes + Term 619906 - 619949 14.3 + Prom 619969 - 620028 1.9 616 317 Op 1 . + CDS 620079 - 620843 593 ## COG0321 Lipoate-protein ligase B 617 317 Op 2 . + CDS 620899 - 622836 1572 ## COG3336 Predicted membrane protein 618 317 Op 3 . + CDS 622833 - 625076 1409 ## COG2217 Cation transport ATPase - Term 624938 - 624975 -0.9 619 318 Tu 1 . - CDS 625033 - 625242 74 ## 620 319 Tu 1 . + CDS 625189 - 626079 773 ## COG0320 Lipoate synthase - Term 626486 - 626524 -0.5 621 320 Tu 1 . - CDS 626568 - 626876 201 ## gi|313763865|gb|EFS35229.1| hypothetical protein HMPREF9567_01664 - Term 627004 - 627048 -0.9 622 321 Tu 1 . - CDS 627260 - 627424 83 ## gi|332675102|gb|AEE71918.1| hypothetical protein PAZ_c07340 623 322 Tu 1 . + CDS 627441 - 628244 788 ## HMPREF0675_3756 CAMP factor (Cfa) - Term 628262 - 628317 23.4 624 323 Tu 1 . - CDS 628341 - 628742 151 ## PPA2405 hypothetical protein - Prom 628964 - 629023 2.4 + Prom 628848 - 628907 3.2 625 324 Op 1 . + CDS 628953 - 630485 1146 ## COG0477 Permeases of the major facilitator superfamily 626 324 Op 2 . + CDS 630558 - 632873 890 ## COG4409 Neuraminidase (sialidase) 627 324 Op 3 . + CDS 632948 - 633916 483 ## HMPREF0675_3753 BNR/Asp-box repeat protein 628 325 Tu 1 . + CDS 634121 - 634639 128 ## PPA0684 sialidase B (EC:3.2.1.18) + Term 634678 - 634710 -1.0 629 326 Op 1 . + CDS 634841 - 635611 856 ## PPA0683 hypothetical protein 630 326 Op 2 . + CDS 635619 - 637424 1330 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains - Term 637285 - 637316 -0.9 631 327 Tu 1 . - CDS 637429 - 637617 65 ## 632 328 Tu 1 . + CDS 637526 - 638590 544 ## PPA0681 hypothetical protein 633 329 Op 1 . - CDS 638538 - 639095 438 ## COG3477 Predicted periplasmic/secreted protein 634 329 Op 2 3/0.074 - CDS 639073 - 639567 372 ## COG2190 Phosphotransferase system IIA components 635 329 Op 3 . - CDS 639567 - 639797 285 ## COG1264 Phosphotransferase system IIB components - Term 639873 - 639918 2.1 636 330 Op 1 . - CDS 639927 - 640175 179 ## COG1264 Phosphotransferase system IIB components 637 330 Op 2 . - CDS 640172 - 640897 514 ## COG2188 Transcriptional regulators + Prom 640963 - 641022 1.8 638 331 Tu 1 . + CDS 641073 - 642461 1589 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 639 332 Op 1 . - CDS 642538 - 643146 386 ## COG0586 Uncharacterized membrane-associated protein 640 332 Op 2 . - CDS 643170 - 644273 704 ## COG0438 Glycosyltransferase 641 332 Op 3 . - CDS 644288 - 644710 308 ## PPA0672 hypothetical protein 642 333 Tu 1 . + CDS 644878 - 646245 1382 ## COG0174 Glutamine synthetase 643 334 Tu 1 . - CDS 646327 - 646734 226 ## HMPREF0675_3739 hypothetical protein 644 335 Tu 1 . - CDS 646977 - 648041 481 ## COG1434 Uncharacterized conserved protein 645 336 Op 1 . + CDS 648227 - 649408 597 ## COG0327 Uncharacterized conserved protein 646 336 Op 2 . + CDS 649415 - 650737 842 ## COG2966 Uncharacterized conserved protein 647 337 Tu 1 . - CDS 650731 - 653682 1449 ## COG1391 Glutamine synthetase adenylyltransferase 648 338 Tu 1 . + CDS 653812 - 654615 285 ## HMPREF0675_3733 hypothetical protein + Term 654648 - 654694 -0.2 649 339 Tu 1 . - CDS 654634 - 655935 1036 ## COG0174 Glutamine synthetase 650 340 Tu 1 . + CDS 656039 - 656908 418 ## HMPREF0675_3732 hypothetical protein + Prom 657192 - 657251 2.1 651 341 Tu 1 . + CDS 657312 - 658166 696 ## COG0024 Methionine aminopeptidase 652 342 Tu 1 . - CDS 658173 - 658346 67 ## HMPREF0675_3729 hypothetical protein 653 343 Op 1 . + CDS 658549 - 660327 1480 ## COG1966 Carbon starvation protein, predicted membrane protein 654 343 Op 2 . + CDS 660177 - 660818 579 ## COG1966 Carbon starvation protein, predicted membrane protein 655 343 Op 3 . + CDS 660815 - 661030 108 ## HMPREF0675_3727 hypothetical protein - Term 660794 - 660830 1.9 656 344 Op 1 . - CDS 661065 - 661685 404 ## HMPREF0675_3726 hypothetical protein 657 344 Op 2 35/0.000 - CDS 661682 - 662479 199 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 658 344 Op 3 33/0.000 - CDS 662476 - 663510 602 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 659 344 Op 4 . - CDS 663507 - 664520 908 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component - Prom 664733 - 664792 3.1 - Term 664868 - 664904 1.9 660 345 Op 1 . - CDS 665014 - 665385 400 ## HMPREF0675_3721 hypothetical protein 661 345 Op 2 . - CDS 665382 - 665576 230 ## HMPREF0675_3720 hypothetical protein - Prom 665616 - 665675 3.7 - Term 665875 - 665915 -0.6 662 346 Tu 1 . - CDS 665931 - 666221 100 ## gi|328752951|gb|EGF66567.1| hypothetical protein HMPREF9563_02204 663 347 Tu 1 . - CDS 666681 - 667451 609 ## COG1579 Zn-ribbon protein, possibly nucleic acid-binding 664 348 Op 1 . + CDS 668078 - 668251 58 ## gi|332675062|gb|AEE71878.1| hypothetical protein PAZ_c06900 665 348 Op 2 . + CDS 668248 - 668649 156 ## gi|332675061|gb|AEE71877.1| hypothetical protein PAZ_c06890 666 349 Tu 1 . + CDS 668943 - 670439 1252 ## COG0006 Xaa-Pro aminopeptidase 667 350 Tu 1 . - CDS 670470 - 671342 634 ## PPA0649 putative cytochrome oxidase assembly protein 668 351 Op 1 . - CDS 671456 - 671965 497 ## HMPREF0675_3715 hypothetical protein 669 351 Op 2 . - CDS 671965 - 672270 56 ## + Prom 672011 - 672070 2.8 670 352 Op 1 3/0.074 + CDS 672122 - 673336 961 ## COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) 671 352 Op 2 1/0.128 + CDS 673329 - 673844 401 ## COG4420 Predicted membrane protein 672 352 Op 3 . + CDS 673906 - 675066 1040 ## COG0489 ATPases involved in chromosome partitioning 673 352 Op 4 . + CDS 675122 - 676696 1193 ## PPA0644 endoglycoceramidase (EC:3.2.1.123) 674 353 Op 1 . - CDS 676849 - 677262 419 ## HMPREF0675_3710 putative twin arginine-targeting protein translocase TatB 675 353 Op 2 . - CDS 677313 - 678194 875 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase - Prom 678216 - 678275 1.9 676 354 Tu 1 . + CDS 678264 - 678917 580 ## COG4122 Predicted O-methyltransferase + Term 678948 - 678986 6.7 - Term 678930 - 678978 9.1 677 355 Tu 1 . - CDS 679000 - 680226 1143 ## COG0448 ADP-glucose pyrophosphorylase 678 356 Tu 1 . + CDS 680370 - 681554 737 ## COG0438 Glycosyltransferase + Term 681586 - 681633 17.1 679 357 Op 1 . - CDS 681635 - 681802 151 ## HMPREF0675_3705 hypothetical protein 680 357 Op 2 . - CDS 681843 - 682148 213 ## HMPREF0675_3704 DivIVA domain protein 681 357 Op 3 . - CDS 682193 - 683272 647 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 682 358 Tu 1 . + CDS 683513 - 684004 235 ## HMPREF0675_3702 transcriptional regulator, TetR family 683 359 Op 1 . - CDS 684017 - 685312 695 ## COG0477 Permeases of the major facilitator superfamily 684 359 Op 2 . - CDS 685328 - 686389 559 ## HMPREF0675_3700 hypothetical protein 685 360 Op 1 . - CDS 686513 - 687640 965 ## PPA0632 glycine amidinotransferase (EC:2.1.4.1) 686 360 Op 2 . - CDS 687716 - 687877 85 ## HMPREF0675_3698 hypothetical protein - Prom 687916 - 687975 2.2 687 361 Op 1 . + CDS 688024 - 688986 869 ## COG2171 Tetrahydrodipicolinate N-succinyltransferase 688 361 Op 2 . + CDS 689084 - 689926 474 ## HMPREF0675_3696 hypothetical protein - Term 689682 - 689726 -0.5 689 362 Op 1 4/0.053 - CDS 689927 - 691030 757 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase 690 362 Op 2 . - CDS 691027 - 691347 263 ## COG1146 Ferredoxin 691 363 Op 1 17/0.000 - CDS 691493 - 692914 1709 ## COG1282 NAD/NADP transhydrogenase beta subunit 692 363 Op 2 . - CDS 692918 - 694465 1409 ## COG3288 NAD/NADP transhydrogenase alpha subunit 693 364 Tu 1 . + CDS 694458 - 694610 58 ## gi|289426738|ref|ZP_06428466.1| conserved hypothetical protein 694 365 Tu 1 . - CDS 694699 - 694851 74 ## 695 366 Op 1 . + CDS 694829 - 695329 493 ## COG1247 Sortase and related acyltransferases 696 366 Op 2 . + CDS 695419 - 695922 509 ## COG2236 Predicted phosphoribosyltransferases 697 367 Tu 1 . - CDS 695913 - 697664 1073 ## COG2376 Dihydroxyacetone kinase + Prom 697604 - 697663 2.4 698 368 Tu 1 . + CDS 697763 - 698812 794 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 699 369 Tu 1 . - CDS 698843 - 702301 2224 ## COG1012 NAD-dependent aldehyde dehydrogenases 700 370 Op 1 . + CDS 702391 - 703413 529 ## COG1457 Purine-cytosine permease and related proteins 701 370 Op 2 . + CDS 703298 - 703855 489 ## HMPREF0675_3685 permease, cytosine/purine, uracil, thiamine, allantoin family 702 370 Op 3 . + CDS 703852 - 704403 320 ## COG1335 Amidases related to nicotinamidase 703 371 Op 1 25/0.000 + CDS 704522 - 705439 1029 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin 704 371 Op 2 42/0.000 + CDS 705481 - 706284 218 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 705 371 Op 3 . + CDS 706299 - 707153 793 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 706 372 Tu 1 . + CDS 707271 - 707384 62 ## HMPREF0675_3680 hypothetical protein - Term 707301 - 707332 -0.9 707 373 Op 1 . - CDS 707511 - 709355 787 ## HMPREF0675_3679 efflux ABC transporter, permease protein 708 373 Op 2 . - CDS 709397 - 709672 218 ## PPA2403 hypothetical protein 709 374 Tu 1 . - CDS 709808 - 711028 458 ## COG1653 ABC-type sugar transport system, periplasmic component - Prom 711089 - 711148 2.7 + Prom 711124 - 711183 1.6 710 375 Op 1 . + CDS 711245 - 712243 575 ## COG1609 Transcriptional regulators 711 375 Op 2 . + CDS 712292 - 712624 141 ## HMPREF0675_3667 hypothetical protein 712 375 Op 3 34/0.000 + CDS 712670 - 713218 483 ## COG0765 ABC-type amino acid transport system, permease component 713 375 Op 4 . + CDS 713254 - 714015 608 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 714 375 Op 5 . + CDS 714046 - 714276 160 ## COG2501 Uncharacterized conserved protein - Term 714284 - 714337 12.2 715 376 Op 1 . - CDS 714356 - 715828 1213 ## COG1404 Subtilisin-like serine proteases - Prom 715862 - 715921 2.8 716 376 Op 2 . - CDS 716050 - 717096 872 ## COG1703 Putative periplasmic protein kinase ArgK and related GTPases of G3E family 717 377 Op 1 7/0.011 - CDS 717250 - 719439 2132 ## COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit 718 377 Op 2 . - CDS 719436 - 721346 1860 ## COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit + Prom 721304 - 721363 2.7 719 378 Tu 1 . + CDS 721562 - 721762 59 ## - Term 721544 - 721591 -0.8 720 379 Tu 1 . - CDS 721780 - 721941 108 ## + Prom 721798 - 721857 1.6 721 380 Op 1 . + CDS 721892 - 722233 275 ## COG2267 Lysophospholipase 722 380 Op 2 . + CDS 722245 - 722817 396 ## PPA0594 putative lysophospholipase (EC:3.1.1.5) 723 381 Tu 1 . + CDS 722961 - 724127 1204 ## COG1004 Predicted UDP-glucose 6-dehydrogenase 724 382 Op 1 . - CDS 724152 - 725387 792 ## COG0366 Glycosidases 725 382 Op 2 . - CDS 725432 - 726856 1074 ## COG0833 Amino acid transporters - Prom 726899 - 726958 1.5 - Term 726957 - 727000 7.5 726 383 Op 1 . - CDS 727017 - 727520 449 ## COG2077 Peroxiredoxin 727 383 Op 2 . - CDS 727573 - 728541 743 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 728 383 Op 3 . - CDS 728567 - 729085 500 ## COG2716 Glycine cleavage system regulatory protein 729 383 Op 4 . - CDS 729109 - 729639 198 ## COG1990 Uncharacterized conserved protein - Term 729916 - 729948 -0.2 730 384 Tu 1 . - CDS 729953 - 730357 164 ## COG1438 Arginine repressor - Prom 730395 - 730454 1.8 - Term 730417 - 730458 1.0 731 385 Op 1 8/0.000 - CDS 730633 - 731538 675 ## COG0549 Carbamate kinase 732 385 Op 2 7/0.011 - CDS 731559 - 732563 836 ## COG0078 Ornithine carbamoyltransferase 733 385 Op 3 3/0.074 - CDS 732637 - 733881 511 ## PROTEIN SUPPORTED gi|149002994|ref|ZP_01827905.1| 50S ribosomal protein L33 - Prom 733935 - 733994 3.4 734 386 Tu 1 . - CDS 734012 - 735568 1269 ## COG0531 Amino acid transporters - Prom 735650 - 735709 2.2 735 387 Tu 1 . + CDS 735561 - 735920 95 ## - Term 736181 - 736221 -0.5 736 388 Tu 1 . - CDS 736284 - 736973 629 ## COG0693 Putative intracellular protease/amidase 737 389 Tu 1 . - CDS 737093 - 737521 449 ## COG1764 Predicted redox protein, regulator of disulfide bond formation - Prom 737576 - 737635 2.2 738 390 Tu 1 . + CDS 737546 - 738073 199 ## COG1846 Transcriptional regulators 739 391 Op 1 . + CDS 738185 - 739366 711 ## COG0738 Fucose permease 740 391 Op 2 . + CDS 739429 - 739896 464 ## HMPREF0675_3637 hypothetical protein 741 392 Tu 1 . - CDS 739974 - 740549 431 ## PPA0576 hypothetical protein 742 393 Tu 1 . - CDS 740842 - 741915 1064 ## COG0012 Predicted GTPase, probable translation factor 743 394 Tu 1 . - CDS 742064 - 743350 851 ## COG1362 Aspartyl aminopeptidase 744 395 Tu 1 . + CDS 743429 - 744649 746 ## COG1322 Uncharacterized protein conserved in bacteria 745 396 Tu 1 . - CDS 744653 - 745624 403 ## PROTEIN SUPPORTED gi|229229955|ref|ZP_04354520.1| SSU ribosomal protein S1P; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase - Prom 745701 - 745760 2.2 + Prom 745701 - 745760 2.8 746 397 Op 1 . + CDS 745906 - 748551 1807 ## COG3391 Uncharacterized conserved protein + Term 748565 - 748610 6.2 747 397 Op 2 14/0.000 + CDS 748632 - 749879 726 ## COG1570 Exonuclease VII, large subunit 748 397 Op 3 . + CDS 749876 - 750112 262 ## COG1722 Exonuclease VII small subunit 749 398 Op 1 . - CDS 750139 - 750654 246 ## HMPREF0675_3627 hypothetical protein 750 398 Op 2 . - CDS 750734 - 752113 935 ## COG1875 Predicted ATPase related to phosphate starvation-inducible protein PhoH 751 399 Tu 1 . - CDS 752230 - 752901 626 ## COG1272 Predicted membrane protein, hemolysin III homolog + Prom 752896 - 752955 1.8 752 400 Tu 1 . + CDS 753046 - 753867 661 ## COG0020 Undecaprenyl pyrophosphate synthase + Term 753872 - 753921 -0.5 753 401 Tu 1 . - CDS 753889 - 755904 1481 ## COG1331 Highly conserved protein containing a thioredoxin domain 754 402 Tu 1 . + CDS 755857 - 756012 72 ## 755 403 Tu 1 . - CDS 755982 - 756173 185 ## gi|289425798|ref|ZP_06427552.1| hypothetical protein HMPREF1034_1139 756 404 Op 1 . + CDS 756200 - 756625 237 ## HMPREF0675_3622 hypothetical protein 757 404 Op 2 . + CDS 756647 - 757153 618 ## COG0782 Transcription elongation factor + Term 757197 - 757249 12.5 - Term 757178 - 757237 9.0 758 405 Op 1 . - CDS 757258 - 758241 619 ## PPA0560 hypothetical protein 759 405 Op 2 . - CDS 758279 - 759505 1125 ## COG0628 Predicted permease 760 406 Tu 1 . + CDS 759574 - 760290 304 ## COG0692 Uracil DNA glycosylase 761 407 Op 1 . - CDS 760318 - 760422 77 ## 762 407 Op 2 . - CDS 760419 - 762038 1202 ## COG0733 Na+-dependent transporters of the SNF family 763 408 Tu 1 . + CDS 762195 - 762827 623 ## COG0225 Peptide methionine sulfoxide reductase 764 409 Tu 1 . + CDS 762943 - 763806 761 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 765 410 Op 1 . - CDS 763849 - 765837 1875 ## COG1297 Predicted membrane protein 766 410 Op 2 . - CDS 765912 - 766313 223 ## HMPREF0675_3612 hypothetical protein 767 411 Tu 1 . + CDS 766479 - 766893 162 ## PPA2401 hypothetical protein Predicted protein(s) >gi|302034473|gb|GL383162.1| GENE 1 110 - 409 194 99 aa, chain + ## HITS:1 COG:no KEGG:PPA1286 NR:ns ## KEGG: PPA1286 # Name: not_defined # Def: putative thioesterase # Organism: P.acnes # Pathway: not_defined # 1 99 139 237 237 212 100.0 4e-54 MRSYGLTPKSILNSDESDDLFVRPTLDDLLLAESCCGNQLKQIHVPITCVSAIDDKIVSS EEAIQWREATSETYRLIEVTGGHYAHEGFRRKEWLNVFS >gi|302034473|gb|GL383162.1| GENE 2 1080 - 1322 158 80 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKFSPYNFFLRCDPKFNMQISTLNSKRIYTALKLFFKFKFAGYTVQISWLDMTNFNEIFI GCFCCGCVDAYPSIYSNTLN >gi|302034473|gb|GL383162.1| GENE 3 1494 - 1631 68 45 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLVIATGNNSSYPCMRTIYCMCYFSWEAFPIQIDFFRDTVIERNL >gi|302034473|gb|GL383162.1| GENE 4 1960 - 2130 100 56 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|314917982|gb|EFS81813.1| ## NR: gi|314917982|gb|EFS81813.1| hypothetical protein HMPREF9598_01546 [Propionibacterium acnes HL050PA1] hypothetical protein HMPREF9595_00305 [Propionibacterium acnes HL005PA2] # 1 56 1 56 56 97 100.0 2e-19 MLLVHAKIIGRSRGWRRVRIVVLSSLVPIIHIADGLSVYDARTHLDRELNHEPLWE >gi|302034473|gb|GL383162.1| GENE 5 2166 - 2318 68 50 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313807795|gb|EFS46282.1| ## NR: gi|313807795|gb|EFS46282.1| hypothetical protein HMPREF9580_01626 [Propionibacterium acnes HL087PA2] # 9 50 1 42 42 65 97.0 1e-09 MHRICHTNMSIKLEDSCGKIKFVMKRLKKLLASLIGLKSRGASEDNRDTK >gi|302034473|gb|GL383162.1| GENE 6 2491 - 3513 650 340 aa, chain + ## HITS:1 COG:no KEGG:PPA1284 NR:ns ## KEGG: PPA1284 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 340 67 406 406 529 99.0 1e-149 MTRGGALFLASPLHRLSVRSCVRIALTLISVSYAVVALTANPYAIIAALGAAGLGFSVNG TGVRSFIALATPDRASQNRGFAVIQVVANCTAAVGPIIGNMILDRNIYEQFLLGVSVALF IAAILAPMAAPKGVMMSEGSLRPPMGIKIFRELFRTADARKITIVALIGSILIGQFFSSF SLVFSAIATSSMMRSLFYTTNGVLVVLIQIPISLLVERQLKIGVKVQKIMMSGVCTLGIS MLFFNASRGLLGVVLVFCGVFIFSLGETVFTPILNVAFANLTEGRPVVESMNMRQLTSAV GETGGVWIGLSVYSQLEHAHLGLMYWIALTALAALSLRCK >gi|302034473|gb|GL383162.1| GENE 7 4161 - 4400 82 79 aa, chain + ## HITS:1 COG:no KEGG:PPA1283 NR:ns ## KEGG: PPA1283 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 79 1 79 79 125 100.0 5e-28 MVSRWAGEAESGFEGLQVESFGGRAWEEVETEPLEPCTIRVSASVWRLIERDVSRQGMTV SAWTCQALTREVTQTLKAS >gi|302034473|gb|GL383162.1| GENE 8 4864 - 5634 617 256 aa, chain + ## HITS:1 COG:no KEGG:PPA1281 NR:ns ## KEGG: PPA1281 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 256 18 273 273 492 99.0 1e-138 MKRRKITYVAVGVLALSLIIFGTILAINKSRQGPAIETSQDTISKAIVSIPKSVYDKVGP GSSELQVTKIGNKPDKDGKVKLFYVGSEFCPFCAMERLPLAAALSRFGTFSGLKDTLSSP AEKELSNIPTITFRNYKYSSKYVDLDAYELADREGRQIANLPESKQNIFSKYNPGRGIPF SYWGDITTSNPSYMPWMAREDPKNVVKALSNPNSKEAQAIVGGANLFTAEICSRTGNKPA NVCTSPGVKAAAEKLR >gi|302034473|gb|GL383162.1| GENE 9 5927 - 6592 525 221 aa, chain + ## HITS:1 COG:slr0110 KEGG:ns NR:ns ## COG: slr0110 COG1192 # Protein_GI_number: 16331850 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Synechocystis # 30 151 5 126 211 80 37.0 2e-15 MWAGFSSHTTPIHRCIDALIHVCNDADMSRVISVVNTKGGVGKTTTAVYLATALSCQDRV VLLDADPQGSATSWATDAFEAGDRLNFEVRPANAPIVRRCRDIDADLVFIDTPPGDSQTV TAALEVADVVIIPTESGDLDMDRALMTYQVAHGTRRALLFNKADWTRQYRDAYEGAAAVE GLDVLDAEVHRRVAYRQAIGTRPTDLGEFAQVAAQIQEMLK >gi|302034473|gb|GL383162.1| GENE 10 6589 - 6846 295 85 aa, chain + ## HITS:1 COG:no KEGG:PPA1279 NR:ns ## KEGG: PPA1279 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 85 1 85 85 134 100.0 8e-31 MSKNRKPTAADKASRYTGRMAASQGASVSETFQSAKTPITAFNVKLPTATHTALKMRAVE EHTTMNDLLRKALEHTYGFPYDPYQ >gi|302034473|gb|GL383162.1| GENE 11 7047 - 7460 363 137 aa, chain + ## HITS:1 COG:no KEGG:PPA1278 NR:ns ## KEGG: PPA1278 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 137 1 137 137 224 97.0 1e-57 MSMTAEVGTVYDVIAHREVSPEANFWVFEIPALGAVGQAVKLGQVADEARGIITAWDEDG PDEKAFKVHVRLDGEADARRMWEEGEEEEHQARKVLDHAATRKREAVTLLRVEKKYSATD TARVLGVTRQRVYQLTR >gi|302034473|gb|GL383162.1| GENE 12 7806 - 8186 197 126 aa, chain - ## HITS:1 COG:no KEGG:PPA2383 NR:ns ## KEGG: PPA2383 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 126 6 131 131 214 100.0 7e-55 MSKRHPGRFGHIVAEIIQDIVGVGVVAINSTVLVIMAAVLAEYVPYKHFYHVVGNVVVYA CLAAAIAVPFFVHHWRKRRPGSHPATDYVGRSVRRAGLLTLIGTMFIGKLVSPATRGMSR SSRRRW >gi|302034473|gb|GL383162.1| GENE 13 8840 - 9115 99 91 aa, chain - ## HITS:1 COG:no KEGG:PPA2384 NR:ns ## KEGG: PPA2384 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 91 94 184 184 159 100.0 3e-38 MLRNSLFLRKRSGSLRTSHPTPGGMSSTTRTEAGGFFVSGVTISLLRCGAATLVLFLPSS IVSPIRVKALGYGQVPVWWGGQCGGVSGQGC >gi|302034473|gb|GL383162.1| GENE 14 9609 - 9857 202 82 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFRKRLTRVELGRALGVTPAAAGRKLRGEIGWSIGDLFHVAEFLGVEVSTLLPARGRKIP ANPEADGELVAGTGFEPVTSGL >gi|302034473|gb|GL383162.1| GENE 15 10086 - 11573 1200 495 aa, chain + ## HITS:1 COG:AGl861 KEGG:ns NR:ns ## COG: AGl861 COG0747 # Protein_GI_number: 15890545 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 7 491 50 536 540 279 34.0 8e-75 MRDQLKAAGLAVAVALSATGIAGCQSTDDNVLTIGATAAPPTLDLVSNAAAAIPQVLLYN VYETLVRVNDSGKLVGLLAKSWKLSDDGLRLTFRLDPNARFASGARVTSAAVKASLELMR GASASPVNQANLAAIKAIHTPDDSTVILDLSNRDNFLLFNLASTSGVVIDPATKDLATRP QGSGPYVVTEFTPGHSVTLSPSPRPWHEGNRPTVRFAYYSDPTSQTAALLSGDLDVVSDM TTPQALSRFTGNPNYRVLRGTTNGEVVLGMNNTSKALSDRRVRQAILMAIDRKGLLDVVW NGQGTLIGSMVPPTDPWYTDLSHTWPHDPVRARKLLADAGYGNGLTLRLRTAALPYATAA SRVVASELAQVGINVVTDELEFPARWLDVVYTHADYDLTIVAHVEARDIVNWANPDYYWR YHNKEFNRLIESARTGPADRTNETMMQASRILATDAAGGFLFLMPKITISKSGITGLQRN STSMSFDLTKVRRSK >gi|302034473|gb|GL383162.1| GENE 16 11615 - 12547 615 310 aa, chain + ## HITS:1 COG:Cgl2269 KEGG:ns NR:ns ## COG: Cgl2269 COG0601 # Protein_GI_number: 19553519 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Corynebacterium glutamicum # 3 298 16 307 322 227 47.0 3e-59 MWLIVASFVVFALLSLLPGDVAQVILGANADPKAAATVRSRLGLDLPWPQRYWDWISSLV RGDLGTSMVSAEPIGPQIASRLAVTGWLVGLSLVLALLVCLPVGAYAAVHRRKSRGFVAS ALSQVLMSIPAFLAGILLILLFSVTLGWLPAGGYVPLHEDAGAWAAHLILPVLSLSIVQA AVMMRYVRSAFIDVLTDDHMQTARAVGWRLWPALHRHGLRNASISLATVLGLQASAMLVG AIVVEEVFVIPGLGSYLLDAVSTRDLLVVSDVVMVIVAIVMAISYLTDLIVVVLDPRLRT TIRAAQEEHS >gi|302034473|gb|GL383162.1| GENE 17 12544 - 13356 475 270 aa, chain + ## HITS:1 COG:BMEII0286 KEGG:ns NR:ns ## COG: BMEII0286 COG1173 # Protein_GI_number: 17988631 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Brucella melitensis # 7 270 1 264 264 211 45.0 9e-55 MKRAGLVIGCVLVGIVVIAGATSAVWTPHDPNLVVPAERLTGPNGQYWLGTDGFGSDIAS RMFVGARTCLLVGVVSVLIAAGIGVPWGVTSAMLPRPWSTVVGRAADLLYAFPALLLAII LAAAVGGSTLTGMIAIGVSTVPVFARITRTASRQILAQDYVVAARSSGMAWRSVAFNHVL PNIAPLIGVQASVSYGTAILAEAALSYLGLATPATVPTWGRMLRDSQVYLFDSPWLTVAP AVAIAGAVMGFTLLGDGLRDFLDPRLREVR >gi|302034473|gb|GL383162.1| GENE 18 13356 - 14165 430 269 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 3 250 8 258 563 170 40 3e-78 MPLLEVNDLVVDFGRHRRVAVDHVSWSLEAGERLGLIGESGSGKSVTALAIMGLLPGNAH VSGSVRWRGKELLGASDHAMSALRGGSIGMVFQEPMTALDPTMKVGRQVGEVPLLHRTVT RGHARGRVLEMLEQVGIEDPARVMDSYPHQLSGGQRQRVLLAMALVNSPDLLICDEPTTA LDVTVQSQVLATIDEVLDSVGAACLFITHDLAVVSHICRELIVMTSGKVVEAGSARDVLS HPDHPYTRRLLRAARLDLVEPGTTIALED >gi|302034473|gb|GL383162.1| GENE 19 14165 - 14950 538 261 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 19 253 33 267 329 211 45 4e-53 MTAQIEVEDLHLHLGSSSGGTNALDGVSLHVNEGQRLGLVGGSGAGKSTLLKAMMALRQP DSGTVRFRGTSLTDANAIRELRRSAAMVFQDPRSSLDPRMSIGRAITEPLRSPVARRTTR QQRKDRLAKVMVDVGLDPESASRFPHEFSGGQRQRIAIARALVTEPDVLVADEPVSALDV SVRAQVLNLLNDLVRERGLTMIFVSHDLGVVRHLCDTVAVMSVGRIVERGKLADVYRDPQ HVVTQELLRAIPRIRVDDSTH >gi|302034473|gb|GL383162.1| GENE 20 14997 - 16187 993 396 aa, chain + ## HITS:1 COG:HI0465 KEGG:ns NR:ns ## COG: HI0465 COG0111 # Protein_GI_number: 16272413 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Haemophilus influenzae # 1 396 12 409 410 390 49.0 1e-108 MKALLLENIHDEAVRTLKKAGYEVERVSEALDEDDLISALDGVDLLGIRSRTRVTRRVVE ACGDKLHAVGAFCIGTNQMDLDALAEAGVPAFNAPYSNTRSVVELVMAEIIALARRLGDR NTQMHNGVWRKSAIGSHEIRGRRLGIIGYGNIGQQLSVVAEAMGMQVFFYDIADVLPMGN AHKCDSMEELLGSVETVSLHIDGRPSNTDLIGDREFAMMRPRSLFLNLSRGKVVDINALV DNLRTGHIAGAGVDVYPEEPASGKEPFISPLREMDNVILTPHIGGSTQEAQVDIGRYVAG KLIDYVDNGATGMSVNIPEITPSPRTGARIGYLHRNVPGVMATLNRLVADQGGNVTYQAL ATKGELGYCILDIAETDSGLLANVTVLEGTIRARIL >gi|302034473|gb|GL383162.1| GENE 21 16231 - 17019 512 262 aa, chain - ## HITS:1 COG:Cgl0776 KEGG:ns NR:ns ## COG: Cgl0776 COG0483 # Protein_GI_number: 19552026 # Func_class: G Carbohydrate transport and metabolism # Function: Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family # Organism: Corynebacterium glutamicum # 20 255 20 256 260 234 54.0 1e-61 MADHTDDLRLAHILADDADSLTMSRFGARDLTVSTKPDHSEVTDADLAVEDSVRRTLSRM RSRDAVHGEERADTGDGPRRWIIDPIDGTANFLRGVPVWATLIALSVEDQIVASVVSAPA LKRRWWAARGSGAWSGKSLASATPIHVSNVRNLADAFLSYSSLHGWVESGRGHGFGELMR SVWRTRAFGDFWSYMMVAEGVVDVACEPELSLHDMAALDAIVTEAGGKFTGLDGKDGPWS GNALASNGFLHDQALAMVQPQE >gi|302034473|gb|GL383162.1| GENE 22 17226 - 18038 497 270 aa, chain + ## HITS:1 COG:DR0964 KEGG:ns NR:ns ## COG: DR0964 COG2939 # Protein_GI_number: 15805988 # Func_class: E Amino acid transport and metabolism # Function: Carboxypeptidase C (cathepsin A) # Organism: Deinococcus radiodurans # 5 258 115 367 500 220 47.0 2e-57 MVAYGPRVVDLGTPEQPATPPFHLIDNEHTLLRETDLVIMDAMSTGYSRVVDGHDPNEWH GWSKDVELVSELIRLWVTRYGRWGSPLYLLGESYGTVRAVSVAQRLQDTFSMYLNGIILV SSVLDFGTQDFEDLTWDRACIGFLPTYAANAHYHGHNADRTLEDVLDEAEGFADGPYRKA LAAGHRLDPADRAQVVATVSRLTGLDVNYIERADLRIEHVRFCTELLRSKGKAVGRIDGR YTGALPRRTYEVADTDPSGDDTVAIFVHGF >gi|302034473|gb|GL383162.1| GENE 23 18457 - 19458 525 333 aa, chain - ## HITS:1 COG:ML0791 KEGG:ns NR:ns ## COG: ML0791 COG1162 # Protein_GI_number: 15827343 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Mycobacterium leprae # 21 328 15 322 327 282 51.0 8e-76 MSPRRLASSGIDMRDWSSYDRPKRRTKPRTKQRPDYSSLPIGTVITIDRGRYRCRLDDGV EVTAAKARQLGRKSVIVGDKVRLDGDVSGAEGSLARIVHTEERVTVLRRTADDTDPHERP IVANADQVVVVTALADPPPRPGIIDRILVAAHAAGVSPILCLTKADLASGDDFVAMYSQL GIPVTTSQPGADLAELHQLLRGKVSVLVGHSGVGKSTLINALVPGVNRVTGHVNDVTGRG RHTSTSAEAIPLSEGGWIIDTPGVRSFGLSHVPTGDILAGFEELDAVSVDCPRGCQHTNS SPECALDDAVSDGRVQQSRVDSLRRLLSATAPR >gi|302034473|gb|GL383162.1| GENE 24 19460 - 20578 423 372 aa, chain - ## HITS:1 COG:Cgl0740 KEGG:ns NR:ns ## COG: Cgl0740 COG0128 # Protein_GI_number: 19551990 # Func_class: E Amino acid transport and metabolism # Function: 5-enolpyruvylshikimate-3-phosphate synthase # Organism: Corynebacterium glutamicum # 1 369 64 429 430 298 46.0 1e-80 MSAGLQLLGADIQPIGPGSVQVMPGLAHPTGPIECGMAGTVMRFLPVVAALVPGQTRFVG DEQASRRPIAPVLNGLRQLGVEVDSDRLPFSLNAPDRMCGPKVTIDSATSSQFISALLLA SARFPQGIDLRHNGASVPSIPHIAMTCTMLADRGVTVVSDEPCHWVVRPGPIHALDDVIE PDLTNAAVFLAAALIVGGSVTVPGWPTDSTQPGAQFMGIAEKMGAMVSRVDGSMTIAAQG WQELRPLDVDLHEASELTPVVAAVASLARGRSRIRGVAHIRGHETDRLAALEHELAKLGV EVQQTDNGLDITGRGADKLHGGKFGCYADHRMAHAGALLGLVIDGVELDDITCTSKTMPQ FPQMWANLVEEV >gi|302034473|gb|GL383162.1| GENE 25 20739 - 21365 573 208 aa, chain - ## HITS:1 COG:Cgl1340_1 KEGG:ns NR:ns ## COG: Cgl1340_1 COG2259 # Protein_GI_number: 19552590 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 3 147 1 142 142 72 32.0 8e-13 MSIIRGLGRTMFASYFIVKGTNSAMKPDSFVEDAAPVVDRLLPVVQHALPASISAYIPED TKTLVRATGAAQAFGGLGMATGLARRAGAGVVAATMVPHVLASIPDKTSPKDERTAARSV LLRNVALLGGAMMASRDTAGHPSLAWRAADTQRRVSSAASGQRKAITSSVDGLSKSARKK LKKAQKKAAKTQKKAQKKAKKAQKKIAD >gi|302034473|gb|GL383162.1| GENE 26 21562 - 22266 477 234 aa, chain + ## HITS:1 COG:MT3320 KEGG:ns NR:ns ## COG: MT3320 COG1595 # Protein_GI_number: 15842811 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Mycobacterium tuberculosis CDC1551 # 23 208 86 271 284 229 65.0 2e-60 MITRESEDRMDRRVDASGTVDVAEETKTQRAQRFERDALEYLDQLYGAALRMTRNPADAE DVVQEAYAKAFSSFHQFRPGTNLKAWLYRILTNTYINSYRKAQRRPQTSDDQDVEDWQIA KAASHDSNGLRSAELEALDGLPDQQILDALDGLSDEFRQVVLLADVEGFAYKEIAEIMGT PIGTVMSRLNRARKQLRKQLVDVAGARGIGPRAGQVDEEDLGRSAIARRAGREG >gi|302034473|gb|GL383162.1| GENE 27 22269 - 22529 255 86 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4330 NR:ns ## KEGG: HMPREF0675_4330 # Name: not_defined # Def: anti-sigma factor # Organism: P.acnes_SK137 # Pathway: not_defined # 1 86 3 88 88 148 96.0 9e-35 MTQSAGNEESCYWVIDHLQEFLHGEMSEHDADAFRRHIAACESCMDEADMEAAVSRALKR CTRTVAAPMQLRSRLVQMHVTYRWQA >gi|302034473|gb|GL383162.1| GENE 28 22619 - 22693 73 24 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGKTGRKRRARRKKGANHGKRPNA >gi|302034473|gb|GL383162.1| GENE 29 22875 - 24350 1049 491 aa, chain + ## HITS:1 COG:ML0803 KEGG:ns NR:ns ## COG: ML0803 COG3920 # Protein_GI_number: 15827350 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Mycobacterium leprae # 1 490 1 494 500 306 41.0 4e-83 MPALNRIVADRTRLDDADITWLEDLVDDWQMLADTSFSDLILWVPDRDPNVFWAVAQVRP DTGPTALEDDVVGESVAYDDESLVTEAFMSAEMCETSDNKLSAGIPVDIWAIPVVRRGEV IAVVERHTNQMGVRAPGNTEDNYLEIADILSEMLHHGRFPQFPGSDRALAPKVTDGVIRV AATGMITFASPNALSAFRRLGLAGDLDGEYLIPTVRELCPRLREVGQSLTLDLEGRWLTE TDIENSDATVRARVIPLQTWLDDVEVSAGTLILIRDLTELRDRDRQLVTKDATIREIHHR VKNNLQTVAALLRLQSRRMSNSDAKDALKQAMGRVSAIAVVHEILSQNFEEQVAFDEVAD RILHMVGDVAASSGSVVARREGSFGEVPAETATALSLATTELCQNAIEHSLDSSSGNVIV RSHRTDDALVVDIVSDGKPLPEGFSLDNHRSSLGLSIVTTLMQDLGGTFTLEDNSDRVGT CARLVIPLQRL >gi|302034473|gb|GL383162.1| GENE 30 24380 - 24631 272 83 aa, chain - ## HITS:1 COG:no KEGG:PPA1264 NR:ns ## KEGG: PPA1264 # Name: not_defined # Def: transcription factor WhiB3 # Organism: P.acnes # Pathway: not_defined # 1 72 59 130 141 139 100.0 4e-32 MDWRHRAACLSEDPELFFPIGNTGPALAQIEEAKKVCARCEVRAECLAWALEAGQDHGVW GGMSEDERRAIKRRQSRSRVRRS >gi|302034473|gb|GL383162.1| GENE 31 24913 - 25311 277 132 aa, chain + ## HITS:1 COG:no KEGG:PPA1263 NR:ns ## KEGG: PPA1263 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 132 1 132 132 179 100.0 3e-44 MIPSSEHDVRSSVSHGRVPAAVLVAVAGTWISTVVLLIVAIRVMVSGRDIFGAGVGAMLI IYASLVALVGWLAIKGRSSAQGLLVASGMLHLVVLVSTQRSGGPAWFWGLAIIPATVIVA SLVPRSRTWLRG >gi|302034473|gb|GL383162.1| GENE 32 25366 - 25560 192 64 aa, chain - ## HITS:1 COG:no KEGG:PPA1262 NR:ns ## KEGG: PPA1262 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 64 1 64 64 102 100.0 5e-21 MVHDGAMYFTDRGIEELEDRRGDEEITFTWLADELRHFVDLNPEFEVPVERLATFLARLD DEDE >gi|302034473|gb|GL383162.1| GENE 33 25609 - 29316 3036 1235 aa, chain - ## HITS:1 COG:MT1286_3 KEGG:ns NR:ns ## COG: MT1286_3 COG0567 # Protein_GI_number: 15840693 # Func_class: C Energy production and conversion # Function: 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes # Organism: Mycobacterium tuberculosis CDC1551 # 352 1235 2 896 896 921 52.0 0 MSPAPHDKSNNSPDFGANDWLIEEMRDQYQSDPNSVDPAWATFFRKEAVESTDSVTKSAA KDVPGASAPKPATKPQPVPAAKPAPITAPKPQKQPPRPPMSADAPRHSAKLETVEPTVTK MKGAPMRTAKNMDQSLTMPTATTVRDVPMQLVIEQRTMINSFLKKAKGGKVSFTHILAYA MVQALKTVSAMNNAYAEIDGKPHLIENHQINLGMAIDVIASDGSRKLVVPAIKGAEQMDF LDFWRAYEEIVRKGRTNELTVDDFKGVTASLTNPGGFGTNHSIARLMPGQGMILGVGSID YPAAYQGNSPTRIAELGISKVTTLTSTYDHRIIQGAQSGEFLRRMHQLLLGADRFYEDIF ESLRIPYAPVQWASDRLANRADQVGKQARVIELIDAWRRFGHLSADLDPIEYRPRFHRDL MLNSHGLTLWDFDRTFPIANFAGQRRATMSLREILTILRDSYASKMGIEYMHIADYEQRK WFQDRFEKEHQPLSRKMHLQILDQLNEAEIFETFLQTKFVGQKRFSLEGGESAIVLLAAL CNRAADDGLNEVCIGMPHRGRLNVLANIIGKSYGQIFREFEGNAEPVNSQGSGDVKYHLG DEGQFTAASGNTIKASVAANPSHLEAVDPVLEGICRAKLDALGNPEGFPVLPILMHGDAA FAGQGVVYETLQMSQLGGYRTGGTIHVIVNNQVGFTTSPRDGRSSTYCTDVAKAVGAPVL HVNGDDPASVVHAARIAYEYRQTFHRDVVVDVVCYRRRGHNEGDDPSFTQPHMYGLIAEK RSTRKLYTESLIGRGDITTEDAEAVMTKFRSRLETVFKEVREATSTPEPYSGVPDYPVKH SGLHQTKVEPDTMEAVARAHENLPESFNAHPKVAPQMTRRAKHIREGGIDWATGEMIALG SLLRDGVHVRLAGQDSRRGTFSQRFAALVDHETGEFYVPVNHLGGEQAHLDVFDSPLNEY AAMGFEYGYSVARPDSLVLWEAQFGDFTNGAQTIIDEFIASAGSKWGQKSGVVLLLPHGY EGQGPDHSSARLERFLNLCSEDALAVCQPSTPASYSHLLRQHAYVNMHRPVVIATPKSML RNKMATSDPEDFTTGRWRPVLPDPSITDPTAVTRIILCSGKARWELVKQRKATSLDGQLA IIPMERLYPLPVDELAEVLAPYTNVTDVRWVQEEPENQGAWYYMLTHLPQAMSEKLPGFF DGLVGITRPPSSAPSVGQHSVHIREEQELLEKAMA >gi|302034473|gb|GL383162.1| GENE 34 29252 - 29419 63 55 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSQSLAPKSGELLDLSCGAGLTTAFFRQTVVSSARGTFRQALRAALLCLCLSTQT >gi|302034473|gb|GL383162.1| GENE 35 29506 - 30822 607 438 aa, chain - ## HITS:1 COG:no KEGG:PPA1260 NR:ns ## KEGG: PPA1260 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 438 1 438 438 793 99.0 0 MPFRDAKTARQGSRAALFSAAGAIVLWTVGRLVMLHVFIQPSSNYITGDLRYYLWWMSSG QPDSSVLPEYPLPVVWFMRTLYWAGGDTYFPMAFSMTMLLLDAILAVAMWHDDHRAGALW WIVLVPFLGPIMWNRFDMVPAVCMGLAALWYRRHPAACGAMIALGAATKLWPALLILPMI SRHRAAVRRLIAFTITGFGLALASLLAGGWERLVSPLTWQSGRGLQIESVPATIPMLHYF RNPHGDHTVRMSSYNAYEIFGPSVASWKSVSTGLMVLAVALAIGLAVVSWHRNGLDHRTA VMADLVIIGALIVANKTLSPQYFIWWAAPTAMILDRVSAEAKDPGDSDALSWARTWCWIV AVLMAVTTFMTQQVYPLHYQKILGGSSSTGWLLVSRNMLVVMTFAACIATLVASLRMHVP AQPTVTPARPRHAALNER >gi|302034473|gb|GL383162.1| GENE 36 31070 - 32500 950 476 aa, chain + ## HITS:1 COG:MT1332 KEGG:ns NR:ns ## COG: MT1332 COG0019 # Protein_GI_number: 15840743 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate decarboxylase # Organism: Mycobacterium tuberculosis CDC1551 # 31 465 7 445 447 437 52.0 1e-122 MTHMHVAGSVHADVAAAGPQWLTLPDDVNALDPALWSASTDRDDDGIVEVAGVTVTELLS QYGSPLYVLDESDLRQRARAFRDAFSEWDVYYAGKAFLTRTIASWIDQEGLFLDTCTGGE LITALQGGMDPARIGLHGNNKSIDELKLALSVGVGRIIVDSLDEIMRIEQLCRENGWHAR VMVRVTAGVEAHTHEYIATAHEDQKFGFSITNGAAMVAMVRCHTSDAIDLLGVHSHIGSQ IFDTAGFEVAARRTMKLLEQFHQATGSALPELDLGGGFGIAYTSQDSPATVESLAGALRE IVTLEARGRGMEVPHISLEPGRAIVGPTTMALYTVGTVKPVDLDTGAQRMYVSVDGGMSD NIRPALYAAEYSAVIANRTSEVAPVLCRIVGKHCEAGDILVRDVYLPGDVSPGDVIAVPG AGAYSRSMASNYNHVPRPAVVSVNEDRGVLVLLRRENIDDLLALDPGPIRAEVPCP >gi|302034473|gb|GL383162.1| GENE 37 32571 - 33896 912 441 aa, chain + ## HITS:1 COG:Cgl1157 KEGG:ns NR:ns ## COG: Cgl1157 COG0460 # Protein_GI_number: 19552407 # Func_class: E Amino acid transport and metabolism # Function: Homoserine dehydrogenase # Organism: Corynebacterium glutamicum # 13 439 19 443 445 385 52.0 1e-107 MTNTTDSASAQPIRVALLGCGVVGSQVARMIESRTEDIAARVGRQVELAGIAVAHPDRPR QGLDSRLFTDDPTVLVNRDDVDIVIELIGGIDPARQLLTAALGKGHSVVTANKALLAAHG TELHAVAESNGVDLYYEAAVAGAIPIVRPLRESLVGDQITRVMGIVNGTTNYILDQMTTT GARFDEALAQAKAQGYAEADPTADVEGYDAAAKAALLSSLAFHTQLRGDQVYREGITEIT PDDILAAHDMDCVVKLLAVCQAGPDGISARVHPALVPATHPLGSVSGAFNAVFIEAREAG RLMFLGPGAGGSPTASAVMGDLVTVARNLVRGVAGPPQDVYGEFPILPMSEVHTRFHLRL QVRDEPGVLAEVAKIFASHRVSLQTVQQSAVEGTDRADGWSATLKVLTHEARECDVDECV NELTGHHYVNSDPRVIRVEGM >gi|302034473|gb|GL383162.1| GENE 38 33899 - 34969 940 356 aa, chain + ## HITS:1 COG:TM0546 KEGG:ns NR:ns ## COG: TM0546 COG0498 # Protein_GI_number: 15643312 # Func_class: E Amino acid transport and metabolism # Function: Threonine synthase # Organism: Thermotoga maritima # 8 353 3 347 348 376 55.0 1e-104 MSQQNRLFGVIETYRDRLPMDGIDQIVTLGEGATPLVPAPRLGAELDATVWVKVEGANPT GSFKDRGMTMAMTKALADGSKAVVCASTGNTSASASAYASRAGMTPVVLLPQGKIAAGKL AQAVVHGGRIIQILGNFDDCLRIARELAENFPVSLVNSINPYRIEGQKTAAFEVVDVLGD APDIHALPVGNAGNITAYWKGYREYVADGPASHTPRMFGFQAAGAAPLVLGHDVNDPETV ATAIRIGRPASGKLALAARDESEGLIDAVTDEQILDAQTFLAAREGIFVEPASAVGVAGL FKLKSEGRLDPGLRIVVTVTGNGLKDIDTALSRTTWSTEAVEASTDQVAALLDFCS >gi|302034473|gb|GL383162.1| GENE 39 34980 - 35870 596 296 aa, chain + ## HITS:1 COG:Cgl1158 KEGG:ns NR:ns ## COG: Cgl1158 COG0083 # Protein_GI_number: 19552408 # Func_class: E Amino acid transport and metabolism # Function: Homoserine kinase # Organism: Corynebacterium glutamicum # 5 274 11 282 309 170 42.0 3e-42 MDNSVRVRVPATSANLGPGYDCIGLALDLWDEVSVGVLDRPGVMIDVTGEGADTVPHDES HLVMATLRQGLVELGYPHPDAGLHLTAINSIPQSRGLGSSAAAVVSGLALAWGLARPGFP LDRSALLTMAAAIEGHPDNAAPAILGGAQLAWLDGEAVNHIGLTVNPSIVFRVYVPDRLV PTALARQVLPEQVDRVDAVHQVLAASLLVTALTTSPEHLLAATQDWIHQPYRRALMPESA ALTDRLRGRGVATVISGAGPTVLALGSRDQLEKVSDVDTAGFVAHDLVLGEGVHFF >gi|302034473|gb|GL383162.1| GENE 40 36274 - 38070 1203 598 aa, chain + ## HITS:1 COG:Rv1297_2 KEGG:ns NR:ns ## COG: Rv1297_2 COG1158 # Protein_GI_number: 15608437 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Mycobacterium tuberculosis H37Rv # 215 595 51 434 440 490 68.0 1e-138 MRKADLIAAISEGGYPGVGRPAERQNRGQESGTSSDEGRQQRTQRRRRAEASEDSEFNKS AGGKKTPSVGDLLDAAEAQKQAETAKKPDDQDPGQQDGGADRPGRERGDRSRRGDSPRRR ARNTSRENSNSNSGDSNINDEVGARLEALSRGQRGERNQSDRGPQHDHNNDSSVDSDDEY GRFSEYGNGGRRSRRRRQRDRQNRRKRSNDRYSDSEPNVREDDVLVPCSGILDIRDQYAF VRTSGYLPGANDAYVSMAIVRRHRLRKGDVIVGQMRAHREGERREKFAPLVKIEQVNGVD PEQMKQRPEFSKLTPLYPQERLRLEDDPKNMTGRIIDLVSPIGKGQRGLIVSPPKAGKTM IMQSIANSITRNNPEVHLMVVLVDERPEEVTDFQRTVSGEVVASTFDRPADDHTQLSELA IERAKRLVELGHDVVILLDGITRLGRAYNLAAPASGRILSGGVDSAALYPPKKFFGAARN IEHGGSLTILATALVETGSKMDEVIFEEFKGTGNMELRLRREFANKRLFPAIDVDASGTR REELLLSREETAIMWKLRRVLSGLEGSQALEMMLSRLRKTQTNVEFLYTISKTTPNQD >gi|302034473|gb|GL383162.1| GENE 41 38186 - 38395 378 69 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50842732|ref|YP_055959.1| 50S ribosomal protein L31 [Propionibacterium acnes KPA171202] # 1 69 1 69 69 150 100 1e-34 MKQGIHPDYRETTVVCTCGNTFTTRSTSQSGTLNADVCSKCHPFYTGKQKILDAGGRVAR FERRYGKKN >gi|302034473|gb|GL383162.1| GENE 42 38517 - 39602 391 361 aa, chain + ## HITS:1 COG:MT1338 KEGG:ns NR:ns ## COG: MT1338 COG0216 # Protein_GI_number: 15840749 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor A # Organism: Mycobacterium tuberculosis CDC1551 # 7 354 6 356 357 325 53.0 9e-89 MSESAQQAIDEVRRRLREIETQLADSAVLSDPSAMGRLGKRHARLRHVVSVADRVDQLRA DVEAAEDLTEEDPAFGLEAERLRGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEE SALFAADLLRMYTRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPSRPAYGYLKHEGG VHRVQRVPVTESSGRIHTSAVGVLVMPDVDETEVDIDPAEVRVDVYRSSGPGGQGVNTTD SAVRLTHLPTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTV DRSARVRTYNFPENRLTDHRIGYKSRKLDQILAGDLGDVLDALHADEVRRRMAQRPEGQE S >gi|302034473|gb|GL383162.1| GENE 43 39534 - 39728 67 64 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTVGFSVLHIATCVHLLPGSQSPRWSVVEWLVPGGEMGWDLPLGFLTFGPLCHPTPHLIG MERV >gi|302034473|gb|GL383162.1| GENE 44 39692 - 40477 257 261 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|107028787|ref|YP_625882.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Burkholderia cenocepacia AU 1054] # 31 241 71 288 302 103 31 2e-20 MLLCEALRIQPSQLIRVASVNADDEDRFNQMVDRRRSGEPAQYIIGHAWFRGLRLEVGPG VFIPRLETELVAEQSIQEARRLVMSGAFPSVIDLCTGTGAIALAVASEVPGSRVSAVEVD DAALTWTRRNLCDSGVEVLAGDALRVPDDSRRFDVVVTNPPYLRRSDASSIPGEVTEHEP DLALFSGDDGLDLPLLLIGRAAELLTPSGLFVMEHDETQREELVAAMATSDMWEQIEDHD DLAGRPRFVTARRRCKDGCHG >gi|302034473|gb|GL383162.1| GENE 45 40470 - 41333 626 287 aa, chain + ## HITS:1 COG:MT1340 KEGG:ns NR:ns ## COG: MT1340 COG0009 # Protein_GI_number: 15840751 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation factor (SUA5) # Organism: Mycobacterium tuberculosis CDC1551 # 46 249 5 207 217 160 48.0 2e-39 MDETDQTMVNTDELAGPVAEEKSTVSGIEPRGDAAAEDSGISPFILDVANPDSCEDALEQ AADAIADGECIVLPTDTVYGIGADALNALAVQRLLNAKERGRDMPPPVLVSDSVALPALC QHIPAGAKALAEKYWPGGLTLVLRAQESLGMDLGETNGTLAVRVPDQDQTRELLRMTGPL AVSSANKSGHPAALTAQEAADQLGVEVAVYLDAGPSRVGESSTIIDFVSTTDGKVVRQGA LSLEAIHEVTPDVIGMEPPAIDQDSSENHGSDVAPTEATSTQSEIEG >gi|302034473|gb|GL383162.1| GENE 46 41342 - 42445 674 367 aa, chain + ## HITS:1 COG:MT1341 KEGG:ns NR:ns ## COG: MT1341 COG0472 # Protein_GI_number: 15840752 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase # Organism: Mycobacterium tuberculosis CDC1551 # 1 329 31 361 405 223 44.0 5e-58 MREYLLVMLTSGLTTYLLSGLCRQAALRWGAVAKVRSRDVHTVPIPYFGGVAMLGGVALA CLLARNMPFLGRHLLVADDALTICLAGVVICAVGVVDDLLDLPALAKAAGQVLAAGIVVT GGVRMFWIPLPNSIIALGTPTSILVTVFFIVLCANAVNFIDGLDGLASGVVAIGSLAFFS YTYLLAHEQDFVVATTTSLITAATAGACLGFLPHNWHPARMFMGDSGALLLGLLLATSTI SLTGQIDSTALTARGGGLVPAYLPIVVPLMVLAIPFLDLVMGYVRRTWRGTWFFVADKQH LHHRLLQRGHSHMRAVLLMYLWTTVLTFGTVFIGLEQTWWAIVIVVTGLGMCVLLTMANS HHPAAQA >gi|302034473|gb|GL383162.1| GENE 47 42602 - 43096 134 164 aa, chain + ## HITS:1 COG:no KEGG:PPA1247 NR:ns ## KEGG: PPA1247 # Name: not_defined # Def: putative cyanate permease # Organism: P.acnes # Pathway: not_defined # 1 164 1 164 164 291 99.0 4e-78 MARLAMSHARVDRRAPVTSRVVSRVYRSGLLWATIVGLLVTLVMTVIVRPRVPSAFSGLA GTVVAVAFLACGRGVHLLNRSGSWLLAVGLFVIQVSVLGGLGALASEYRTGLIPLPCTSA MIGSLLAWTVGVVLAGWQPQRIYEDPEDHDPANAECRQADGGLR >gi|302034473|gb|GL383162.1| GENE 48 43111 - 43389 241 92 aa, chain + ## HITS:1 COG:no KEGG:PPA1246 NR:ns ## KEGG: PPA1246 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 9 92 1 84 84 155 100.0 3e-37 MAAKVSIDMSTNSMRRTSTSSAPSSDGDAWGVLSYVLAGMLFYGGIGWLLSSHFHQVWIF VVGMIVGFAASVYLIVKRYGVVPNQNNDREGQ >gi|302034473|gb|GL383162.1| GENE 49 43386 - 44162 628 258 aa, chain + ## HITS:1 COG:CC0368 KEGG:ns NR:ns ## COG: CC0368 COG0356 # Protein_GI_number: 16124623 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit a # Organism: Caulobacter vibrioides # 39 250 41 244 253 107 38.0 3e-23 MSGIVSPLEFHTPGLEDFKFGGTFGVAWMDKPFWQVIIAFLVVIVFWVWISRGLKVVPGK RQVFGEYCYNFIRNSLARDTIGHGFEPWLPYLVALFSFILINNWFGELFVFMFPTFSHVG YVYGLAIVSWFVYVIAGFKTKGIRYLKDSVLPPGVPWYLRWFIIPLEFLSNFVTRPLTLS LRLFANMVAGHLIIMIFVVGGGFLLTYPSSIIYNVAGGLSLILSFALFALELFVGFLQAY VFTVLSAQYVASSMSEEH >gi|302034473|gb|GL383162.1| GENE 50 44126 - 44269 61 47 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4308 NR:ns ## KEGG: HMPREF0675_4308 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 6 47 1 42 42 77 100.0 2e-13 MSMGTMVFPSGFCAPSGGVVFVAGRFDDEVLEVVCRQCSSDIEDATY >gi|302034473|gb|GL383162.1| GENE 51 44253 - 44474 381 73 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4309 NR:ns ## KEGG: HMPREF0675_4309 # Name: not_defined # Def: ATP synthase subunit C (EC:3.6.3.14) # Organism: P.acnes_SK137 # Pathway: Oxidative phosphorylation [PATH:pak00190]; Metabolic pathways [PATH:pak01100] # 1 73 1 73 73 100 100.0 2e-20 MVPMLIGGSLNVLGYGLAALGPALGVAWIFAAVINGTARQPEARPAMMTTAFIGFAVVEA LALFGFILAFIVK >gi|302034473|gb|GL383162.1| GENE 52 44485 - 45039 552 184 aa, chain + ## HITS:1 COG:Cgl1181 KEGG:ns NR:ns ## COG: Cgl1181 COG0711 # Protein_GI_number: 19552431 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit b # Organism: Corynebacterium glutamicum # 2 169 7 180 188 104 43.0 9e-23 MNILEMDLGPLAPEHPIEIIVGVILVLLLTWLIAKAVVPRFEKLYEERTETIQGGIERAE RAQAEAKAALEKYQAQLASARDEAAQIRDDAKSQGAQIIAEMRANAQEEADRITERANAQ IQAERDQAVREVRAEIGGLATTLASRIVGESLQDDQRVQATVDRFLSSLADEPSASNSRT VNRA >gi|302034473|gb|GL383162.1| GENE 53 45036 - 45827 331 263 aa, chain + ## HITS:1 COG:Cgl1182 KEGG:ns NR:ns ## COG: Cgl1182 COG0712 # Protein_GI_number: 19552432 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) # Organism: Corynebacterium glutamicum # 25 259 33 267 271 119 34.0 6e-27 MTTAVGASQQLDEVGDRRGTGTEFANEIFAVVDVLNRESGLRRAVSDTGSETKARQGLID AVFTSKVSPDCKELLDATTTCKWRSPAALTRALERQGVRAVLRGARQADRFEAVADELFH VSRLVRGQAALQVALGDPNRSVADRQELLMKLVGGQVSEETLVLARRAVVASDSTFEQVI DGYLHVAAEMADRRRAIVTTAKALTDAQRAEMVKQLERITGSPIGLSEVVDPTVLGGALI NLGDEVIDSTVAHRLDQARRELG >gi|302034473|gb|GL383162.1| GENE 54 45881 - 47518 1661 545 aa, chain + ## HITS:1 COG:ML1143 KEGG:ns NR:ns ## COG: ML1143 COG0056 # Protein_GI_number: 15827574 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, alpha subunit # Organism: Mycobacterium leprae # 1 539 1 538 558 704 65.0 0 MAELTIRPEEIRDALDNFVQNYEPETAVREEVGTVVTSGDGIAHVEGLPSAMANELLRFE NGTMGIALNLEERQIGVVVLGDSDGIDEGSTVRGTGEVLSVPVGEGYLGRVVDAMGNPVD GLGEIKGVEGRRALEIQAAGVMDRQEVREPLQTGLKAIDSMIPIGRGQRQLIIGDRKTGK TAIAIDTIINQKGNWESGDPQKQVRCIYVAIGQKGSTVAEVKGALEKAGAMEYTTIVHAP ASDPAGFKYIAPYAGSAIGQHWMYQGKHVLIIFDDLTKQAEAYRAMSLLLRRPPGREAYP GDVFYLHSRLLERCAKLSDDLGGGSMTGLPIIETKANDVSAFIPTNVISITDGQIFLQSD LFNANQRPAVDVGISVSRVGGAAQIKAMKSVAGTLKISLAQYRDMQAFAMFASDLDDTSR RQLDRGARLMELLKQGQFSPYPVEEQVISVWGGTTGKFDDVPVGDVLRFEGDVLEYLRSH SNVLTTIRETGKFDDEAKDAAAAAFEEVKKGFKTSDGKMLAGHEEFSPMADEDIDQAKIV RAKKG >gi|302034473|gb|GL383162.1| GENE 55 47522 - 48466 632 314 aa, chain + ## HITS:1 COG:MT1349 KEGG:ns NR:ns ## COG: MT1349 COG0224 # Protein_GI_number: 15840760 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, gamma subunit # Organism: Mycobacterium tuberculosis CDC1551 # 1 310 1 304 305 254 48.0 2e-67 MASNLRELRERRNSVATTKKITRAMELIASSRIIKAQNTVKAAGPYSLELTRALSAVAAH THEEHPLTSMNPDPKRSAVLVITSDRGLAGAYSSNVIRTAEELTTALQPKQEIATYLCGR KAVQYFEFRGRKVDHLWSGFSDSPSYRDAKDIADHLIEDFLRPTEEGGVDEIHMVYTEFE SMLTQTPKVIRLLPLAVVDPQDTPEGQLAEGDPGVGANAEEIFHEYRFEPNPVSVLDELL PLYVANRVHYALLQSAASELASRQRAMKAATDNAEQLIQTLTRQANQARQAAITQEITEI VGGAAALAESAPQE >gi|302034473|gb|GL383162.1| GENE 56 48478 - 49932 1506 484 aa, chain + ## HITS:1 COG:Cgl1185 KEGG:ns NR:ns ## COG: Cgl1185 COG0055 # Protein_GI_number: 19552435 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, beta subunit # Organism: Corynebacterium glutamicum # 4 480 3 480 483 660 70.0 0 MTATTITPETKDEVVGVGRVVRVIGPVVDVEFPAGQLPEILNALHVDAEVMGETHTITLE VALHIGENVVRAISLKPTDGMRRGTEVRDTGAPISVPVGDVTKGHVWNVTGDVLNADPST IEVTERWPIHRDPPAFDDLEPETEMLETGIKVLDLLTPYVKGGKIGLFGGAGVGKTVLIQ EMIYRIAHNFGGTSVFAGVGERTREGNDLINEMDEAGVLKDTALVFGQMDEPPGTRLRIA LTGLTMAEYFRDVQNQDVLLFIDNIFRFSQAGSEVSTLLGRMPSAVGYQPNLADEMGQLQ ERITSTRGHSITSMQAVYVPADDYTDPAPATTFAHLDATTELSREIASRGLYPAVDPLTS TSRILDPLYVGQEHYDTATQVKQILQRNKELQDIIAILGVDELSEEDKVTVARARRIQQF LSQNTYTAEKFTGVAGSTVPIADTVEGFQMICRGDVDHIPEQAFFNVGSMDMVMENWDKM KKEG >gi|302034473|gb|GL383162.1| GENE 57 49938 - 50378 370 146 aa, chain + ## HITS:1 COG:HI0478 KEGG:ns NR:ns ## COG: HI0478 COG0355 # Protein_GI_number: 16272425 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) # Organism: Haemophilus influenzae # 6 96 4 93 142 60 34.0 1e-09 MDHPPLQVKVVSADREVWKGESVNIIVRTTEGDIGLLPGHEAFLAALAPCAAQIITTDGN REVIACDGGFVALDNDGQVSIITQYATRSEEISVDQARRDRDSLRKKLNEHERSEQDPEV VQDLTHRLHLAQAQIAAARLAGKQRS >gi|302034473|gb|GL383162.1| GENE 58 50492 - 51004 335 170 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4301 NR:ns ## KEGG: HMPREF0675_4301 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 3 170 1 168 168 320 99.0 1e-86 MHVSIAQLGSTQMLSTLAMDAVIVGLIVCCAVLYMMWLLIRHRVLMRRRGAFLCGLRVMG GPKPGGWMIGSARYADGAFEWYRAIDPRHVPTIVLRRGGLAMREHHPPVVEDALALASNA YEIVTLETGHRGRSSVCQIVVDPRVVTGLMSWLEAAPPGGVEYATEGHLV >gi|302034473|gb|GL383162.1| GENE 59 51005 - 51670 582 221 aa, chain - ## HITS:1 COG:ML1149 KEGG:ns NR:ns ## COG: ML1149 COG2096 # Protein_GI_number: 15827580 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mycobacterium leprae # 4 207 5 191 191 182 49.0 4e-46 MVILSKIYTRTGDHGSTRLVDNSVTAKSDLRVEAYGLIDQANASIGLAIALDTTTKVLSR EVREALGIIQNELFDVGADLANPLVANPKWEPLRTVQESVDRLERWCDEFGDQLPTLRSF ILPGGNPVGAQLHVCRTAIRTAERAAWRAAEIYGTETSNDPETTPGGVNELAITYLNRLS DLLFILSRAANKAGEDSSDEVVWVPGGERNPSTQMTNDGQE >gi|302034473|gb|GL383162.1| GENE 60 51833 - 52366 193 177 aa, chain - ## HITS:1 COG:MT1297.1 KEGG:ns NR:ns ## COG: MT1297.1 COG1573 # Protein_GI_number: 15840705 # Func_class: L Replication, recombination and repair # Function: Uracil-DNA glycosylase # Organism: Mycobacterium tuberculosis CDC1551 # 1 175 98 265 268 156 51.0 2e-38 MVIIGLAPAAHGANRTGRMFTGDQSGDWLYRALYDADIASQAQSIDAADGLTLHDCRIIA PVHCAPPDNWPRPDEKRTCAIWFDDELARLTALRAVMCLGQIAWTSTLAAARRLGWQVPR PAPRFGHGTRTQLVRPDGSIIVVLGCYHVSRQNTNTGRLTRSMLDDAVNTLRDLATT >gi|302034473|gb|GL383162.1| GENE 61 52672 - 52944 107 90 aa, chain - ## HITS:1 COG:no KEGG:PPA1234 NR:ns ## KEGG: PPA1234 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 90 100 189 189 154 100.0 1e-36 MNAHKHDAYSISIEGLRASQLPESTSMEEQTTTITTIELALDLVFVATNAHLRHQRLSDG NPRRHSCDEPTPPHETFRPRATQHDRIIKK >gi|302034473|gb|GL383162.1| GENE 62 53500 - 54696 1000 398 aa, chain + ## HITS:1 COG:BS_yfmO KEGG:ns NR:ns ## COG: BS_yfmO COG0477 # Protein_GI_number: 16077807 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Bacillus subtilis # 9 385 19 387 396 258 42.0 1e-68 MSKEPVRPAVWAVTIAVAFSYMGVGVVDPILPEISSALKASPGQTELLFSTYLFVSAALM FFASWVATRIGRKKTLLVGLAIIVTFAAACALSGHVDLIIGFRGGWGVGNALFVSTALAT VLGASAEPRRAIMLYEGALGAGMALGPLVGGALGSISWRGPFLGTAVLMAVGLIAIVLFV PPTPIERSARRSAIEPFRALVDSRVSILMLAALVYNYGYFTLLAYAPFPVAEASIRAGGQ FTPLDLGLVFFGWGLMVALGSVWLGPPGCEHVGIRRTVAVTLILFTIDEIVLATWISPIP QVIGVVLGGLLIGIINTAMTEIVMSASDIQREVASSAYSGVRFLGGACAPTLAGALSSMW GIGGPYYIGAVALVLTIILLWIDRQRRMQMTAHSVALG >gi|302034473|gb|GL383162.1| GENE 63 54874 - 55302 162 142 aa, chain + ## HITS:1 COG:CC1214 KEGG:ns NR:ns ## COG: CC1214 COG1186 # Protein_GI_number: 16125464 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor B # Organism: Caulobacter vibrioides # 7 139 5 138 143 80 38.0 1e-15 MVKVGDIEVVPGFIIAETDLRERFSHSSGPGGQGVNTTDSRVELMFDVARSGAVPDRLRP VIMSVLKNRLVDGVLTVTVHDERSQLANRKLARARLVGLLQTACTQPRRRRATRRTRGSQ RRRLDAKKRRGELKRNRQRPTW >gi|302034473|gb|GL383162.1| GENE 64 55620 - 56375 783 251 aa, chain + ## HITS:1 COG:no KEGG:PPA1231 NR:ns ## KEGG: PPA1231 # Name: not_defined # Def: cAMP factor # Organism: P.acnes # Pathway: not_defined # 20 251 36 267 267 347 100.0 3e-94 MPAALPATAAQASAPAPAAVSTVNKTALTTDQIKAERSALNSRINMLQETQKAIPGSQYA DQIEDLIKTALDLSGAIDTIAHGGVPAYDPATIVPRIHLAIDAADAIKTGNTTLQHKVKK AHVELGLEIAKASIVAINPASSVAQVQDEIKALKARIDKVSAYPDLSKDDTATIAYKQTL RKTIHEVRVGRNKNIVGKKDQAVVDTLNKEISKADKVRANAKSTVAQVDTAVDQLRAAYQ TALNAPDKAKK >gi|302034473|gb|GL383162.1| GENE 65 56543 - 57277 419 244 aa, chain + ## HITS:1 COG:no KEGG:PPA1230 NR:ns ## KEGG: PPA1230 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 244 1 244 244 448 100.0 1e-125 MVNDYLVRRSFNVLYIWIDAILLLAFLCILARTRRRAALVVGLLGGVAYLVVDYGFFYAL LGTRTVVGMSVLPLEIWLSFSYGITNMAWMWLWFDEPGNRWEWSILFPAGWLTSALVSQG FGGMFHSVQIARHVSSYHGIMVAFALVGYGWLAMHNLRHPDERYSIRSALIIGIGIQFTW EAVLMISGIRPLTWHPLVIDSLIETNLGAPFMLLIVKAWRARHPKEFLALPVRARPPVAQ RESI >gi|302034473|gb|GL383162.1| GENE 66 57492 - 57911 311 139 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4292 NR:ns ## KEGG: HMPREF0675_4292 # Name: not_defined # Def: transcriptional regulator, ArsR family # Organism: P.acnes_SK137 # Pathway: not_defined # 1 139 1 139 139 258 100.0 7e-68 MAIDTVDEPDVELGDLTRLAAVFKSLGDPHRLVIVQHLFRGEHRVTDLVAHLGLAQSTVS SHVATLRDAGLLASHAHGRAMYYTLAHPQQIRRLMLLADILIRDGGECAELCGMLDVEYR GEPSDDHIGGNDDAVREEY >gi|302034473|gb|GL383162.1| GENE 67 57995 - 58819 454 274 aa, chain + ## HITS:1 COG:lin2720 KEGG:ns NR:ns ## COG: lin2720 COG1230 # Protein_GI_number: 16801781 # Func_class: P Inorganic ion transport and metabolism # Function: Co/Zn/Cd efflux system component # Organism: Listeria innocua # 1 262 35 293 303 199 39.0 6e-51 MITEIITAVISGSLALLSDAGHMLSDIGAIAIALWAARLTRRRPQGSWTWGWKRAEIMSA AVNGVTLLVVAILVGIEAVRRLVTPPAVGGGLVMVIAAVGVVVNVAVAWLVARANRRSLN VEGAYQHILTDLFGFIGTLVAGLVIVTTGWTRADAIASLIICGLMLRAAWSLLSQTGRIL MEVAPASLDLDEVRHHLMDLDHVRSVHDLHAWTVSSDLPALSAHIVVEDSCFADGHAPIL LAQIQQCLSGHFDLDHSTLQLEPPRHAGTENQTM >gi|302034473|gb|GL383162.1| GENE 68 58913 - 60316 988 467 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 3 466 2 457 458 385 44 1e-105 MSSHFDVVVLGAGPGGYVAAIRAAQLGKKTAIIEKEYWGGVCLNVGCIPTKSLLRNAELA HIVTKEAKTFGIGGDITVDFGKAFSRSREVSARMVKGIHFLMKKNKITEFNGWGEFTGPK AISVKDSDGKVTDEITFDNAIIAVGSVVKTLPGTQLSGRVVTYKEQILSDTVPGSIVIAG SGAIGTEFAYVLANYGCDVTIVEFLDRMVPNEDKEVSAELAKAYKKLGIKVLTSTKVDSI DDSGDKVKVTISPSKGGESKVIEADRVLQAVGFAPRVEGYGLEKTGVKLTERGAIEIDDF MRTNVDGIYAIGDCTAKLMLAHTAEAQGVVAAETIAGAQTMPINYDMIPRATYCQPQVGS FGYSEDQAREKGYDVKVSKFPFAANGKAWGLGDGTGFVKIVADARHDELLGASLVGHDVS ELLPELTLAQLWDITAEEIGRNIHAHPSLSEALKDAAEGVEGHMINF >gi|302034473|gb|GL383162.1| GENE 69 60327 - 60632 67 101 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|282853816|ref|ZP_06263153.1| ## NR: gi|282853816|ref|ZP_06263153.1| hypothetical protein HMPREF9206_1749 [Propionibacterium acnes J139] hypothetical protein HMPREF9206_1749 [Propionibacterium acnes J139] hypothetical protein HMPREF9574_01669 [Propionibacterium acnes HL074PA1] hypothetical protein HMPREF9585_02391 [Propionibacterium acnes HL083PA1] hypothetical protein HMPREF9611_02143 [Propionibacterium acnes HL063PA1] hypothetical protein HMPREF9612_02435 [Propionibacterium acnes HL063PA2] hypothetical protein HMPREF9591_02044 [Propionibacterium acnes HL086PA1] hypothetical protein HMPREF9600_02127 [Propionibacterium acnes HL050PA3] hypothetical protein HMPREF9606_02135 [Propionibacterium acnes HL036PA3] hypothetical protein HMPREF9608_00988 [Propionibacterium acnes HL067PA1] hypothetical protein HMPREF9609_01449 [Propionibacterium acnes HL027PA1] hypothetical protein HMPREF9613_01821 [Propionibacterium acnes HL002PA1] hypothetical protein HMPREF9619_00508 [Propionibacterium acnes HL082PA2] hypothetical protein HMPREF9620_02382 [Propionibacterium acnes HL037PA1] hypothetical protein HMPREF9566_02272 [Propionibacterium acnes HL045PA1] hypothetical protein HMPREF9595_00378 [Propionibacterium acnes HL005PA2] hypothetical protein HMPREF9565_01698 [Propionibacterium acnes HL053PA2] hypothetical protein HMPREF9615_01734 [Propionibacterium acnes HL002PA3] hypothetical protein HMPREF9572_01357 [Propionibacterium acnes HL072PA1] hypothetical protein HMPREF9599_00785 [Propionibacterium acnes HL050PA2] hypothetical protein HMPREF9602_01525 [Propionibacterium acnes HL030PA2] hypothetical protein HMPREF9568_02049 [Propionibacterium acnes HL013PA2] hypothetical protein HMPREF9571_01449 [Propionibacterium acnes HL043PA2] hypothetical protein HMPREF9343_01374 [Propionibacterium acnes HL099PA1] # 53 101 1 49 49 87 100.0 2e-16 MRLMYSRERFCVPDSTRWIALWEVFRISANWFCVIPCCLRASRIRRPTEAGVMLSTADPF DDNSFPDQDISDLSSSPREERVEQASRDLFSEIFVTDRCSH >gi|302034473|gb|GL383162.1| GENE 70 60466 - 61992 1450 508 aa, chain + ## HITS:1 COG:TP0029 KEGG:ns NR:ns ## COG: TP0029 COG0766 # Protein_GI_number: 15639023 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine enolpyruvyl transferase # Organism: Treponema pallidum # 75 503 4 421 425 193 32.0 6e-49 MDNITPASVGRLIRDARKQHGMTQNQLAEILKTSQSAIHRVESGTQNLSLEYINRIAEAL ESPIITQPGSGTMNYRIEGGHQLSGSIEVRSSKNAAVALLCACLINRGRTVLRGIAHIEE VNRILEVLTSIGVTYEWSDDEHDLTLIRPAELNLDDMDIEAARRTRSVIMFLGPLMRFYD TFKLPYAGGCNLGARTVEPHLQVLRAFGLDVVATEGFYQCHVTDHTVKERHIVLTERGDT VTENALLAAAQTPGVTVLRNASSNYMVQDLCVFLCQLGVQIEGIGTTTLRIRGVEEIDVD VEYAPSEDPIEAMSLLTAAVVTKSELTITRCPIEFLEIELAILSEMGLDFDLSPEYVSRN GFTRLVDVTVRPSKLRAVADKIHPMPFPGLNIDNLPFFAVIAAEAEGQTLIHDWCYENRA IHLLDLGKLGADVQLLDPHRLIVRGPTRWRGRELICPPALRPAVCLLLAALAASGETTLR DVYMINRGYEDLPTRLGALGAKITVFHG >gi|302034473|gb|GL383162.1| GENE 71 61929 - 62732 291 267 aa, chain - ## HITS:1 COG:YPO2368 KEGG:ns NR:ns ## COG: YPO2368 COG2240 # Protein_GI_number: 16122591 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxal/pyridoxine/pyridoxamine kinase # Organism: Yersinia pestis # 1 230 25 257 286 112 34.0 8e-25 MRAMGVRAWGMPTALLSNHNGRSSVAGIPIDSEQIDAMVNALDSNGELKHVDAVLSGYLT PRTGPAVLRTVERCRALHPDTIWVCDPVMGDMTPDGELRAYVPDETVSLMTDAVQHADVV VPNLAELGILTGTEPRTLDDIVRAARSLTGPHLVIVTSVPYHDDGGDGIAMVGVTGEGAV LTHGPLFDRYFNGAGDLTSAVLTAGLVKGEPLDATLGKAAGVVHTVLERTVAHPGDELDW WPEDAAAQPWKTVILAPNAPSRVGRSS >gi|302034473|gb|GL383162.1| GENE 72 62620 - 62865 142 81 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|315105862|gb|EFT77838.1| ## NR: gi|315105862|gb|EFT77838.1| conserved domain protein [Propionibacterium acnes HL030PA1] # 1 81 1 81 81 142 100.0 7e-33 MASICSESIGIPATLERPLWFDNSAVGIPQARTPIARITGTAMLLPTVPWTTWDCSDKTV TLTLGHGSHSSDTSPEHNGLL >gi|302034473|gb|GL383162.1| GENE 73 62931 - 63656 490 241 aa, chain + ## HITS:1 COG:Rv0317c KEGG:ns NR:ns ## COG: Rv0317c COG0584 # Protein_GI_number: 15607458 # Func_class: C Energy production and conversion # Function: Glycerophosphoryl diester phosphodiesterase # Organism: Mycobacterium tuberculosis H37Rv # 9 223 25 243 256 139 38.0 6e-33 MAVNKGIENTLAAFGHAVEVGCTYLETDVHATSDGVLVAFHDPILDRVTESGGVIAAMPW HKVKQAKVGGEPIPTLDEIFDAFPEAFINIDIKHDGATMPLIDVLSRHRAWSRVCVGSFS SKRIQTFRRLVQGRTATAVGPVGVGWAVIGPHSMQMAQSHGNAYQVPHRLTRYGVPLVTP TFIKAAHRQGRAVHVWTVNEISEARELMDMGVDGIVTDRPDLMCEFARVHQPKEAPTLIP R >gi|302034473|gb|GL383162.1| GENE 74 63818 - 64150 322 110 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4287 NR:ns ## KEGG: HMPREF0675_4287 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 110 1 110 110 176 100.0 4e-43 MADRALRGMGLGSKSFEDEEGVEMAERQQIGFDCQNGHHFELTFSTEAELPSLWECPRCG AEALRSDGTDPQRKKQKPQRTHWDMLTERRSIPELEELLAERLDEIRKEN >gi|302034473|gb|GL383162.1| GENE 75 64205 - 65023 812 272 aa, chain - ## HITS:1 COG:Cgl1444 KEGG:ns NR:ns ## COG: Cgl1444 COG0463 # Protein_GI_number: 19552694 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Corynebacterium glutamicum # 14 251 11 249 270 271 55.0 9e-73 MSATDTEVRLDKVLVIIPTYNEVENVETIVARTRRANPNVDVLVADDNSPDGTGEIADRI ASADDHVHVMHRKGKEGLGAAYLAGFHWGLDHGYDALVEMDADGSHQPEQLPLLLKALKQ ADMVKGSRYVKGGSVVNWPKYRELISRGGGLWTRMCLGIGVKDPTGGFNAFRANTLRAIG LDDVASAGYCFQLDLTWRTLKKGMTVAEVPIEFIEREYGSSKMSKNIVVEALLRTTMWGF DYRSHQLKDLSHVALDRAEKIAGDIKERRSRH >gi|302034473|gb|GL383162.1| GENE 76 65004 - 66593 497 529 aa, chain - ## HITS:1 COG:Cgl1445 KEGG:ns NR:ns ## COG: Cgl1445 COG0815 # Protein_GI_number: 19552695 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Apolipoprotein N-acyltransferase # Organism: Corynebacterium glutamicum # 58 516 77 522 545 170 29.0 6e-42 MISRLRRTSWLRGTAAVAAGAATGTGFQPLNWWILVIPGLAALILLVRNASGRAAAGLGY LFGIGLLTTTISWVGVMGPPVAILLIAVMALWCLLAGWTIRCVSVLPGTPVWQAMVWTAT EIGAATIPLGGFGWVRLAWTVVDTPWVGVLRWAGSIGTSFLVALASGLLVYVVSARGGSQ RRASIVFVAELLVVALAGTMCVTVVSRDISHQRSVRTLVVQGGVDGTAGPYAMGYARSVT DNHLSQTIMALAEQRTSGGPAPDMVLWPENSTDIDPVLDFESHQIVIGALTLSNRPTLVG AVTDGPGHNERQTTSMWWPPSSPQPTSTYHKRNLVPFGEWIPARSFFLPLIPILGKIGRQ SVPGTTPGVVDATIAGRRVPVGVVVCFEVAYDSTVADTVRHGAKILAVQSNNSSFIDTAQ TPQQWQITRARAVETGRHIVVSTTNSFSGLVNPDGSVALRTEEGVHTHFTVTIPLESGLT IGVQIAPWLRIIVLVMTAGAIAMSLLQRRRAMLAQANHNRSERNVRHRH >gi|302034473|gb|GL383162.1| GENE 77 66590 - 67081 335 163 aa, chain - ## HITS:1 COG:MT3390 KEGG:ns NR:ns ## COG: MT3390 COG1522 # Protein_GI_number: 15842882 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Mycobacterium tuberculosis CDC1551 # 16 156 5 145 150 110 39.0 2e-24 MTKHHDEEDEDRSPILEATDRHILALLEKDGRMSWTELGHQTGLSTSAAQQRVKRLEAKG IITGYHATLNLEAIGAGITAFIFLNPIDPEEDETIPGILRTFPEVRGCHSIAGAASYLAR VQAPSAGHLDQLLTRIRKECLCGTETVVVLDTMFDDLGMLGTR >gi|302034473|gb|GL383162.1| GENE 78 67078 - 67701 303 207 aa, chain - ## HITS:1 COG:NMB0939 KEGG:ns NR:ns ## COG: NMB0939 COG0500 # Protein_GI_number: 15676832 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Neisseria meningitidis MC58 # 12 186 14 185 193 118 36.0 6e-27 MILRPGIVASLVPSYSRVLDLGCDDGLLLRHFITTRDCLGTGIELDHPSLVTAMSARVLA LGLDLNEDLGEFHDDSYDVVILSQILQAVVCPDVVRAEMARIGTVLILLVLNVVYWRSRL KIIGEKIPIPHDLPYPWHDTLSQSYAGVADFEEWFASFNLKVVNRVCLDGRGRPSRVASA APNLLAGSTIRVLKSHWVEPGTGRNHS >gi|302034473|gb|GL383162.1| GENE 79 68086 - 68274 112 62 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313807717|gb|EFS46204.1| ## NR: gi|313807717|gb|EFS46204.1| hypothetical protein HMPREF9580_01546 [Propionibacterium acnes HL087PA2] hypothetical protein HMPREF9593_01439 [Propionibacterium acnes HL046PA2] hypothetical protein HMPREF9604_02150 [Propionibacterium acnes HL036PA1] hypothetical protein HMPREF9605_01772 [Propionibacterium acnes HL036PA2] hypothetical protein HMPREF9611_02134 [Propionibacterium acnes HL063PA1] hypothetical protein HMPREF9606_02126 [Propionibacterium acnes HL036PA3] hypothetical protein HMPREF9614_01877 [Propionibacterium acnes HL002PA2] hypothetical protein HMPREF9573_02019 [Propionibacterium acnes HL072PA2] hypothetical protein HMPREF9595_00387 [Propionibacterium acnes HL005PA2] hypothetical protein HMPREF9596_00998 [Propionibacterium acnes HL005PA3] hypothetical protein HMPREF9610_00387 [Propionibacterium acnes HL027PA2] hypothetical protein HMPREF9615_01743 [Propionibacterium acnes HL002PA3] hypothetical protein HMPREF9572_01348 [Propionibacterium acnes HL072PA1] putative polyhydroxyalkanoate synthase [Propionibacterium acnes HL096PA3] hypothetical protein HMPREF9568_02058 [Propionibacterium acnes HL013PA2] hypothetical protein HMPREF9563_01608 [Propionibacterium acnes HL020PA1] # 1 62 29 90 90 113 100.0 4e-24 MGITSKRMTGIDRIVAGRIELPVGFVSDSDVIETPICNQMKRVVRYRDSCVLSLDGTDTG TL >gi|302034473|gb|GL383162.1| GENE 80 68381 - 69598 552 405 aa, chain + ## HITS:1 COG:slr1888_1 KEGG:ns NR:ns ## COG: slr1888_1 COG0427 # Protein_GI_number: 16330298 # Func_class: C Energy production and conversion # Function: Acetyl-CoA hydrolase # Organism: Synechocystis # 27 405 59 445 478 216 36.0 7e-56 MINLADLERVLKGVTGRPRVVCAGSGATPLPLLDAVDRCLETWRFACVNAPVGVPTRKGV IHQTVFIGPGSRHAENLEYVPCRLSLAPRLYEDRFAPDILLLHTSTPHNGAVSMGIEVQV LPAALESAKRRGALVIAQVNPSMPYVFGDGIVDVDDIDIGVIVDTPLPTAAMPSPGPTAW RIGELVASRVPDGATLQVGIGAVPDAVVAMLPDDRAFGVWTELLTDSIRLLEEAHSLDDR LLTGTFAMGTPALYEWLDENPRVQLLRCEKTNNPSFIATQPKMASINAALQVDLFGQVNA TRLRGKIHSGIGGSTDFLVGSMHSPGGQALIAMLSWHPKADCSTIVGLLGSPASATQPSV VITEQGIADLFGKSQEEQARQLIDNAAHPNAREKLWREAKELSLV >gi|302034473|gb|GL383162.1| GENE 81 69609 - 70457 487 282 aa, chain - ## HITS:1 COG:Cgl0894 KEGG:ns NR:ns ## COG: Cgl0894 COG0561 # Protein_GI_number: 19552144 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Corynebacterium glutamicum # 13 275 15 275 277 214 43.0 1e-55 MPNPTPFPAPADDLRLVVSDMDGTLLDGDGNIPSQLWPLLETMRDRAIAFVPASGRQCTT LSTMFGSHLQGMPIIAENGTYVVRDGVDISSSTIDPNLTREVITGVRQLRNDGHDVGLVV ATKSIAYLERGDDPFVSHVATYYHSHRIVKDLSEHTDDVIKLSIYDFREASEATYPTMQR TAPEHQVILATPNWVDIMNPGVNKGSAVEAVQRDLGVTADQTAIFGDFLNDLEMMPMAKW SFAMANGHPNIVKASNYVAPPNTENGVITVLAALLGTRVPIT >gi|302034473|gb|GL383162.1| GENE 82 70521 - 70676 73 51 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MCGRRLQCNGTIGSLYQFRGGARYAYGLGSPACLHRLMVALTAEEPSVLAR >gi|302034473|gb|GL383162.1| GENE 83 70673 - 71584 365 303 aa, chain + ## HITS:1 COG:lin2104 KEGG:ns NR:ns ## COG: lin2104 COG2390 # Protein_GI_number: 16801170 # Func_class: K Transcription # Function: Transcriptional regulator, contains sigma factor-related N-terminal domain # Organism: Listeria innocua # 2 301 8 310 315 103 23.0 6e-22 MMALDAARLYHLRGLDQAAVAQVLHVSRPQVSKLLATARELGYIRTHVVDPRESDRELVQ TLTQHFRIAGLLLVSPSGPTTGDLLHALGAGAAHLTSNLVLPGEEDASFWWSRTVQACAL EMACAPLRPRALYQCAGTAPGHDIHLSMRTFMERTDVEVHPCPVPLLHPSVTARLTAEES PEARQHESRRASSAVLILGSSRQDMDLICRSDLVTSQEREQIRRNAVGHLCGRFIDADGR VVAPTLGQRTSSPTLAQLRRSRRTVLITHGAHQVEFVRAATLRGYVDHIVTDVSTAELLL KYA >gi|302034473|gb|GL383162.1| GENE 84 71686 - 72339 545 217 aa, chain + ## HITS:1 COG:lin2103 KEGG:ns NR:ns ## COG: lin2103 COG0274 # Protein_GI_number: 16801169 # Func_class: F Nucleotide transport and metabolism # Function: Deoxyribose-phosphate aldolase # Organism: Listeria innocua # 1 215 1 216 223 228 59.0 7e-60 MSIAALIDHTLLAPDVTAQHIRTLCREAVDHGFATVCVSPTRVRLAADELAGHAPRVCSV IGFPSGAHLSEIRAAETKAAVNDGADEIDMVINVGAVKDDDWDTVESDISAVVDAAGMAI VKVILEVSELTDEEITRACQAAERCGADFVKTSTGYSRHGATAEAVSLMRRTVGDRLGVK ASGGIRTHNDVATMLRAGATRIGASAGVALLVDEEAL >gi|302034473|gb|GL383162.1| GENE 85 72336 - 73769 1261 477 aa, chain + ## HITS:1 COG:STM3792 KEGG:ns NR:ns ## COG: STM3792 COG0738 # Protein_GI_number: 16767076 # Func_class: G Carbohydrate transport and metabolism # Function: Fucose permease # Organism: Salmonella typhimurium LT2 # 31 450 7 422 438 416 53.0 1e-116 MITKDTTVVNDTDVDRGIPNASWGLIKDHTLQLRDGYLNRTPFFQFILLSICFPMWGMAV SMNDILITQFKAVFALSDLASAFVQSAFYCGYFLIAIPASRVIRRTSYKTGLLIGLSVYI LGCLLFFPASRVATYTVFLAALFSIAVGLSFLETSANTYSSMIGDRKHATLRLNISQTFT SLGFLGGALMGKFLVFTDGAALHERVAHAHTVAEREAITAEALGRTLDPYRIIIIMLIVL VVLIAITQYPHSKPLRNDAEEAKAPIGETLAYLAKNRLFRAGIFTQFLYVGLQTSLWTFT IRLALNLDPALNERTAANYLIAAFISFFLGKTIANLLMTRMSENGILMAYSLLGVLCITY IVVVPSFTTVYAAVIASALLGPGWATIFARNLDLIEDKRYTETGGAIIIMSIIGGAAIPV VQGFLSDTTGSMRLSFIVNAFCFTAIFVFFLVVDRRDQKQICDIAPAALKEAPHANH >gi|302034473|gb|GL383162.1| GENE 86 73756 - 74829 445 357 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4277 NR:ns ## KEGG: HMPREF0675_4277 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 357 1 357 357 737 100.0 0 MPTTDLEIILYPELFDERRRDVLRTGEWIVTAWRYSTGIAALRISNSRGYIEALPFMGQI LWDAVFDGQSLRMDNMFDMPVPARQIVETYGCFAFHSGLLAAGCPSPEDDHPLHGEFPCA PMRSASLVTRHEPCGVTAVTLSSEYEYRIGFGHHYFARPTVTLRAGSAMFDIGLEVTNLS KYQSMPLQYICHMNYAFIPEARMSQSLPDGAFQLRRSVPNHVAPTRQWLRINEDILAGKI DADSLVGAEAFDPEIVYVADDLPQYGKTAEFRMQARAHHNFVTRFRTDQFPVATRWILHN ADQRVAAYVLPGTSRPEGRLAAEAAGTLIHLDAGATRTFSVTTGLLAQGEAFDRKAQ >gi|302034473|gb|GL383162.1| GENE 87 74831 - 75745 587 304 aa, chain + ## HITS:1 COG:STM3793 KEGG:ns NR:ns ## COG: STM3793 COG0524 # Protein_GI_number: 16767077 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Salmonella typhimurium LT2 # 1 291 1 292 306 331 57.0 1e-90 MDIAVVGSNMVDLISYIHRMPSDGETVEAPEFRMGCGGKGANQAVAASRLGAEVVMVTRV GNDVFADTTLDNFRKNGIDTTHVLRTDASSGVAPIFVDPESRNSILIIKGANAQLSPADI EGARQDIATCKLIMLQLEIPLETVYATIELGDVLGIPILLNPAPVAPELDLERIRGIEFF MPNESELELITGMPVDTLDDIGKATDVLLGAGITNIIVTLGSRGAMWAHAEGRKIIKAPV VQAVDTTGAGDAFIGCFAKEWVDHGDVIAAIRAGNRYAADSVTRHGTQSSYALADGSLPE WLRS >gi|302034473|gb|GL383162.1| GENE 88 76275 - 76937 373 220 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|314915739|gb|EFS79570.1| ## NR: gi|314915739|gb|EFS79570.1| conserved domain protein [Propionibacterium acnes HL005PA4] conserved domain protein [Propionibacterium acnes HL059PA2] conserved domain protein [Propionibacterium acnes HL087PA3] conserved domain protein [Propionibacterium acnes HL083PA2] conserved domain protein [Propionibacterium acnes HL087PA1] # 54 220 1 167 167 292 99.0 1e-77 MLICFICIYPKLHLSHLSYFYTSRPSTSAINQYQKHLQKQLLVPPNTSLKQLPVTLCNKQ KSSNTFVNLWKLTETRRSFRKLHTVDELREFVDNNEISLIDYMISTIDEDVSTAAGRSRY VARGAEILSHVSDGVIFDNCVKLLALESLSSLSTVREAVGKVDETMKTSGNLDEITKVCR KCLLLHSPASSMMARSVKRKRQAPKKVPKKHSSQACNRFS >gi|302034473|gb|GL383162.1| GENE 89 76899 - 77234 428 111 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313764264|gb|EFS35628.1| ## NR: gi|313764264|gb|EFS35628.1| hypothetical protein HMPREF9567_01108 [Propionibacterium acnes HL013PA1] hypothetical protein HMPREF9589_00948 [Propionibacterium acnes HL059PA1] hypothetical protein HMPREF9597_01231 [Propionibacterium acnes HL005PA4] hypothetical protein HMPREF9598_01453 [Propionibacterium acnes HL050PA1] hypothetical protein HMPREF9600_02108 [Propionibacterium acnes HL050PA3] hypothetical protein HMPREF9608_00969 [Propionibacterium acnes HL067PA1] hypothetical protein HMPREF9609_01430 [Propionibacterium acnes HL027PA1] hypothetical protein HMPREF9613_01802 [Propionibacterium acnes HL002PA1] hypothetical protein HMPREF9590_00945 [Propionibacterium acnes HL059PA2] hypothetical protein HMPREF9592_02058 [Propionibacterium acnes HL046PA1] hypothetical protein HMPREF9581_01917 [Propionibacterium acnes HL087PA3] hypothetical protein HMPREF9586_02035 [Propionibacterium acnes HL083PA2] hypothetical protein HMPREF9588_02231 [Propionibacterium acnes HL025PA2] hypothetical protein HMPREF9579_01670 [Propionibacterium acnes HL087PA1] # 1 111 1 111 111 214 100.0 1e-54 MKFRVDANEANKHMVIMSLAGMKADDYSPKQKDGKNVLSEDGKQLYSVRNVHAYDTDRQR EMQNTFIAVMEPAEIHPMARYVFDGDVWIKPYAMNGRLGMTIEATRLVSVK >gi|302034473|gb|GL383162.1| GENE 90 77294 - 78724 752 476 aa, chain + ## HITS:1 COG:YPO1376 KEGG:ns NR:ns ## COG: YPO1376 COG1674 # Protein_GI_number: 16121656 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Yersinia pestis # 142 444 871 1201 1305 85 27.0 2e-16 MSIIQEHFESKDVQARQEHPFMYLLGQAIGWVVRTIFSFIRWSWLSILWVCAAVLLMKAI SGFWGKFLAIAVLLVPIFIPQTRRFSFAVHDWQRFRAHRYEVRALENGNKFLRRMGLVHD DDTTYNVALYFGADECVLACHEMIPGLAPQRLIDSCKAFMTDLDAQSVRSENLGGGLFNI HFILNDPLDASTEITQPKPLDLTDMSVEIGKDAFGDPFRLKLKDTAGVLVGGVPGSGKSA FLNAALGSYALATDDVSMTVIDCKGGQDFSAYESRVDTFISEATDFTEVRDVLRNTVEEM NKRVKTNGAVLGESNFWNVAPSERRSKGVKMKLIVIDEAQALFDLSGITDKEEKKLRQEI TRACTDLVKRGRSAGVLTIFATQKPTADAIPTAIRDNVNVRIALRVTTSEAERAIMGYVP DELDVPRATSIPASRKGGAVIESEGGTRKMIRSYYFPEKKLRAFLAGHGEALAERC >gi|302034473|gb|GL383162.1| GENE 91 78896 - 79828 751 310 aa, chain + ## HITS:1 COG:no KEGG:Closa_0181 NR:ns ## KEGG: Closa_0181 # Name: not_defined # Def: Viral replication-associated protein # Organism: C.saccharolyticum # Pathway: not_defined # 47 297 59 307 336 90 27.0 7e-17 MMTTDRCRDWMLTLPEEYYSRDIVEDKLRSYDYIGQLESGKESGYRHFQIYVENKNAIKF ETLRSKFPRGHYEPRRESKSQCLKYCTKSDTRVPGHSLLAGGKFVGKDVDELLKDRLPRT KRDISAEISEKMLKENVPASTLIQDPRYAQFLKYIEALETIRLKNLGLEDRDALEVHYLY GPSRVGKTYKILHGLNYDLTDIYRVSNFKYPWDNYEGQSVLLLDEFAGQISFEFLLQVLD KYQLELNARYRNKWACWTQVWIVSNLPMESLPYYRRVSPEQWRALCMRFTSYQRMESDRS LVNVPFPSAS >gi|302034473|gb|GL383162.1| GENE 92 79771 - 81033 410 420 aa, chain - ## HITS:1 COG:no KEGG:Rxyl_1927 NR:ns ## KEGG: Rxyl_1927 # Name: not_defined # Def: phage integrase # Organism: R.xylanophilus # Pathway: not_defined # 21 387 19 375 379 98 28.0 7e-19 MYYRERSVRTYKDKTYIREYWTAESSFYDKNGTKQRVRGRGATRAEATKRLNKNLRQRID GTRTATGPRGGLTLNQWVNIWLATKQASEQMKPQTAQQHKIRYKQWIAPKLGSRPVKRLT AEEIQEVIAAGAQQGHAIPVNIFKTMNAALNSAVKAGEVDLNPMKQLTPPRQRSAAGEKD TAHIEYWSRIMDKMCKWLAQPECELHDRYTLTIAMLLGLRRAELLGLTWDCFDECMNKLT IKQQLMRQNDGSYIIQNSTKTGKNRTLMLPERWKEAFLLQRQKSLTAAAPEWNNLVFLTP AGGPITYSMYNKLWRNTIVTYMAKEGQEWKEEQHYWRPHTCRKMCASWLAWGGVDIQTAM SILGHSSEAMTLYYTIINADQQRKALEGLSNVYEHHNVYNADYEAEGNGTLTKLRSDSIR >gi|302034473|gb|GL383162.1| GENE 93 81271 - 82641 910 456 aa, chain - ## HITS:1 COG:MT1753 KEGG:ns NR:ns ## COG: MT1753 COG1160 # Protein_GI_number: 15841173 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Mycobacterium tuberculosis CDC1551 # 3 456 9 461 463 508 61.0 1e-144 MSDSPEFRNDPSDDIEEALPKPVVAVVGRPNVGKSTLVNRILGRRAAVVQDVPGVTRDRV SYDAEWSGRQFVLVDTGGWASDASGMAAMIAEQAELAISTADAVLFVVDANVGTTDEDEA VVQVLRQSRKPVVVAANKVDNARGESEAATMWNLGLGEPHPVSAMHGRGSGDLLDALIAV LPKEQASYESSDGPRRVAIVGKPNVGKSSLLNRIARQNRVVVSDISGTTVDPVDELVTVG GTVYQFIDTAGLRKRVKEASGHEYYASLRTQAAIERAEVCVVVIDASESISDQDLRILTM VENAGRAMVIAYNKWDLTDEERRRYLEREIERDVQAYSWAPRVNISALNGRNVDKLEKAI ETAAEGWEMRISTGKLNAFLGRLAAAHPHPVRGGKQPRILFGTQAHNCPPTFALFTSGVF DQGYVRFIIRRLREDFGFAGSPVHVEIRPRAKRQRK >gi|302034473|gb|GL383162.1| GENE 94 82706 - 83377 211 223 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15639271|ref|NP_218720.1| bifunctional cytidylate kinase/ribosomal protein S1 [Treponema pallidum subsp. pallidum str. Nichols] # 6 214 35 279 863 85 30 3e-15 MSTSPLVIAIDGPSGSGKSSTSRGVANRLGLARLDTGSMYRAVACRVAHLGIDPTTNPRD AIKVAQSCHLEIDTSAIDDRVVIDGEDVTKEIRDPQTSAKVSAVATIQPVRDALTARMRQ VAADRGRIVMEGRDITTVVCPDAQVRVLLVADPAIRVARRQAELGEKVDMAQVIDSIVRR DRDDSTVSTFEEPAEGVTVVDSTHLNLDQVIDAVIDLVPVTLR >gi|302034473|gb|GL383162.1| GENE 95 83440 - 84537 609 365 aa, chain - ## HITS:1 COG:SA1197 KEGG:ns NR:ns ## COG: SA1197 COG0287 # Protein_GI_number: 15926945 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydrogenase # Organism: Staphylococcus aureus N315 # 15 329 4 327 363 116 28.0 6e-26 MTDPNRVEPTLTGPVLIVGVGLIGASIGKALMREGTDVHLWDIDRDNSLIAAGHGAGRLG NLADDAYRMIVIATPPAVVAQTVVERLTRHPQAVVTDTASVKGAVLAELTTLATEHEIDI SRYVGSHPMAGTQCTGPLTASTELFVDRTWVVAPRTDNRYDDVQQVVALARACGARVVSM DAHEHDRAVAEVSHLPHLMSILTAANLRRARPEHLSLAGPGIRDVTRIARSQTTMWRQIL SSNCVEVRSQLEAIRDDLDDLLSRLNDSERLEEFLSVGQAGARKVAGKHGHQMVETTAVV VEIPDTPGALARLFADVEAAGINIEDLSVEHNPARETGFLSIDVAPSRAEQLTASMRNHG WSVRS >gi|302034473|gb|GL383162.1| GENE 96 84524 - 85201 559 225 aa, chain - ## HITS:1 COG:Rv2109c KEGG:ns NR:ns ## COG: Rv2109c COG0638 # Protein_GI_number: 15609246 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: 20S proteasome, alpha and beta subunits # Organism: Mycobacterium tuberculosis H37Rv # 1 217 1 230 248 105 34.0 8e-23 MTVPAYVPPSEWVTDRSTFVSDSIRNGGDGIVVARCANGIALLARQCGADLPKGMRSVSE IHDRLAFAAVGLFHEADELRVAGIRFADLRAYAYGRLDVTGRSLASMYARIIGKTFARID VKPYQVQVTVAELGLVPSEDRFYTIDFDGSVRAGTGPILMGATGENSLDLPNNAPVSEVV RAAAHVLDVEPANLEVGLLNRHASTRRHFRRLDAATVLEADGDGS >gi|302034473|gb|GL383162.1| GENE 97 85201 - 86037 458 278 aa, chain - ## HITS:1 COG:ML1322 KEGG:ns NR:ns ## COG: ML1322 COG0638 # Protein_GI_number: 15827687 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: 20S proteasome, alpha and beta subunits # Organism: Mycobacterium leprae # 14 266 18 275 291 135 37.0 6e-32 MPLSLSDLDGDYLMSSTTTDSFAVLLRRVAPELLPPTTVDTSVPELLRHGRTVLAIRYNG GVVVAADLGSALARRLGQTDVDRILGTDDRCVIGVAGAAGLAGEMIRLFQAEVDHLEKIQ GQRISMDGCAVRLSSLVRSHGTMMAQGLAVTPLLAGWDELAHRGRIFSYDGTGGQTEEHS HACVGSGALFASDVLNEDYRTGMDRDESVALAIRALDTAISDDSPSSLSGPDLSRGLYPT VACVDSHGVTRMPTEEVAVLTKRLVDQVTAESDREEAQ >gi|302034473|gb|GL383162.1| GENE 98 86184 - 86804 408 206 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4268 NR:ns ## KEGG: HMPREF0675_4268 # Name: not_defined # Def: transcriptional regulator, TetR family # Organism: P.acnes_SK137 # Pathway: not_defined # 1 206 2 207 207 348 99.0 1e-94 MPAAVERPHRDEVRSRILAAAAHNFERDGYVGASLRRIATDAGFTKGAVYSNFGSKPDLF GQVCAARLTNGERDLVDALSPILSSCERPDDLMRNISEKLTEILLEDAPWQVILAEFRAL ARRDAEIAKAYSKLQSQRIAQLAELMTQYGVLDHIESADAANPRSLAVVVLSLVNVLALE FSVASAVIDRQVITDVIERAIRGFLQ >gi|302034473|gb|GL383162.1| GENE 99 86804 - 87709 456 301 aa, chain + ## HITS:1 COG:SSO2838 KEGG:ns NR:ns ## COG: SSO2838 COG0410 # Protein_GI_number: 15899552 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport systems, ATPase component # Organism: Sulfolobus solfataricus # 27 207 7 183 236 60 27.0 5e-09 MRFSKRPSVDAQAVEDASGAVLYARDLNAQGRKGMIFGPLDMDLAPRQLAVIHGPAGAGK SALLLALCGRFRRTRGTLIIDGIDAMAEPYRAIQRTSVARIGDYVVPEDRLTLNESVAER CHLDAVNLKKAESRVRQIEEIVGFRIDRSCEFEQLEAIERAVASVALAMLRQTKVIVIDD ADVMVPHNQQKLLFEIFSRLTELDDSTIIAATVDDDMAPPGSLDVELPAHNRVHAVRDIH TNKDADGNSQDPEAPEVTRISLESKDNIRPDVPREIYSALDDISDNNSSTENDCPDDSPR R >gi|302034473|gb|GL383162.1| GENE 100 87713 - 89899 1357 728 aa, chain + ## HITS:1 COG:BS_yhgE KEGG:ns NR:ns ## COG: BS_yhgE COG1511 # Protein_GI_number: 16078080 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Bacillus subtilis # 24 694 21 756 775 221 24.0 4e-57 MLTRFIRLVQFEFRRFKGRSKLGLIFILIIPLLYGGIYLHANWDLYSNTNKVKIAVVNHD KPATFGGRTVNGGQEFQNSLKKNPRFDWQFLGTDENKAYQGLRDAEYFMIIEVPEDFSTN IVSAGDFRPARATLQLHRDDANGFIIGLLTSQVQTALEQALDQSVSETYFNALFVNLGVI KQSLSKASDGSAQIDNGLKTLDAGVTEMNNKVLGATKAVGDSTTTVNQVNSALANADSAA AKTSSAVTQTRVGAQAITGAAQNVMADSQAVNSAMVPLINNVTKNLPALQKQARNLVSVT GTLQNPNGDSVIKIQHDVTGVVNKATALAAKHPELAGDPDYIALVKQINGAASSTTTVSS NIAAVANVSAGLNLSLNQQNADTLANNATAALGRLNKDAQQVNNGLETINGAMDTADSVA KDLNKAVNDATDAGRSFTAKAPQIVSGVMQLSNGLGQLKTGSDNLSKGATQLHRGLDSGA KQIPGLSDDKRSNLANIMSSPVDIEQTILHSAKYYGRGLAPMFFSIAMWIACISTFLVVR TFSGRAMTGRANSLSIALVGFGPLAVIALAGAYIMAFGVWLILGLDPVHPWYFIGFVTLA SLSWMMLAFWMRLIFGSPQTAIFLILLVLQLPTCGGTFPVTMLPPVYQKLAVVMPMKYSV DAFRVLISGGPMSTLALGFAVEGGILVISMIITLVLVHRHKLFRMRDLHPPMITSTSTAD FAFSVRPR >gi|302034473|gb|GL383162.1| GENE 101 89974 - 90285 231 103 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4265 NR:ns ## KEGG: HMPREF0675_4265 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 103 27 129 129 134 100.0 9e-31 MGRASHGEVLSPGGLLRTGTPFVLGLVVGWVIVVTARVAALRWLAGVVLWVSTLIVGMVV RYFTGQGVAVIFVTVAASFLALTLVGWRAIAAAIRAMRRKEHP >gi|302034473|gb|GL383162.1| GENE 102 90360 - 91997 1312 545 aa, chain - ## HITS:1 COG:MT2178 KEGG:ns NR:ns ## COG: MT2178 COG2519 # Protein_GI_number: 15841610 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA(1-methyladenosine) methyltransferase and related methyltransferases # Organism: Mycobacterium tuberculosis CDC1551 # 247 518 5 280 280 273 52.0 6e-73 MPSETHTATADRFFAAVLWDFDGTLVDTESRWVEAELAILASHGIVWEPEQANEFTGGPL TDVCEAMAADLGGSVTVDDVRCELITMVSQFNRERDVPWRPGVLDLLTEIREAGIPMGIV TGSAHAVVEPVLEAMAERIGNPFDTVVTFDDVIPETAKPAPDPYLLAAERLGVSITDCLA IEDSPKGATSATSAGAAVLTVTGLAKVGPGPRRVHRPDLSGLSLADVVSLWHLADEPAAP VANGGGGVLRAGERITLTDPKGRKHSIVLQPGGIFHTTKGAVRHDDLIGGPQGVVVTSVG GLDFLAMRPILSEFTVSMPREAAIIYPKEAAQITMWADIFPGARVLEAGVGSGGLSIPLL RAIGTKGCLHSYERRQEFADVARKNVESFYGEIPSTWDLKVSDLVSGISSEPIDRAILDM LAPWECVETVGKVLVPGGVLCCYVATTTQMGRVMDTLRAHGGWTEPSATETTTRDWHAEG LAIRPAHGTTGHTGFLVISRRLAPGVAAPMRKRRPAPGAYGPDYHGPRPRNITEHDQWRL PKEEK >gi|302034473|gb|GL383162.1| GENE 103 92394 - 93287 437 297 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4262 NR:ns ## KEGG: HMPREF0675_4262 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 297 22 318 318 580 100.0 1e-164 MNVLGHSGAKGRESQTKAGANLGTMRFRHMDRPWVVVAFGGWNDAGTAATQAASLIAEYS DAKIWRTIDGEVFHDFRQTRPAITVMNDLEIVSWPSTAIRVGRWQGQPIVVVDGPEPSLR WRTYCFRLLRRLRKLNPAGLVVLGAMATDVAHTRQLPVMVSATDPNLISELGAEKLEYDG PTGIPFVFVTEARRHGMNAIGLWVGVPQYACESLCPPAVQALLVRIEELTGIAIPQAGLE EDKRDWVAAIDEALVDHPELAEYIAALETEQDAALSEGLTGDVLAVEFQSYLRHRGH >gi|302034473|gb|GL383162.1| GENE 104 93304 - 93975 500 223 aa, chain - ## HITS:1 COG:MT1452 KEGG:ns NR:ns ## COG: MT1452 COG0036 # Protein_GI_number: 15840866 # Func_class: G Carbohydrate transport and metabolism # Function: Pentose-5-phosphate-3-epimerase # Organism: Mycobacterium tuberculosis CDC1551 # 5 220 10 225 229 229 56.0 3e-60 MVVRITPSILNANLANLASEVGRIPSADGLHIDVMDGHFVPNLVMGAPFVESLRPATNLM FDVHLMIENPDRWARQYVEAGAQSVTFHLEAATAPIKLARELRSMGARASVALRPATPVE QLADILTEFDQILLMTVEPGFGGQKFLDPVLAKIRKARKLIDATRKDIWLQIDGGVSADT IERAAEAGADTFVAGSAVYRSDNPDHVVASLRNRALAAQVCAH >gi|302034473|gb|GL383162.1| GENE 105 94154 - 94999 959 281 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4260 NR:ns ## KEGG: HMPREF0675_4260 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 271 1 271 281 424 100.0 1e-117 MKIKFIAAPLVAGALMVPATLSTPAAQAAVPTIPAVSSNTADAHKLLEGVNGRITSLNDD LKVAKASLSPMEVIDTIADLLKQAKQLKAQLEKIVKGVVTFAKSIPARVELFLAMCDTTH TATLTLQDKVQNAHSTVFLAIAHAINVLITINSTPAQLTDEVAALKKAIAAAQAMPDLKP TDVATKYVRAKLGRLMVQVRFDRNTCVINYKDRDAVRLLNRAIIRAGQVRSNAWVRVADV DQAIKELKAAYQDALKAPNKKSAPASPSSCMPAADAPVAVA >gi|302034473|gb|GL383162.1| GENE 106 95320 - 96090 641 256 aa, chain - ## HITS:1 COG:no KEGG:PPA1197 NR:ns ## KEGG: PPA1197 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 256 1 256 256 368 100.0 1e-100 MTTTLMKTCLLGMAGAMTFSLVACGNNSSSTGTPASTTVARSSTSVTASPTPVEHEQTKA PKHLSQDDFTKAISSKKINNQTFTIVDNSQIAAQMNQVTKVMSQAKISPAECGKILKQSI SSVTGGELNNIISAIGSDQSAPTTVTFNTTMSSRQKKSFETEDKQFSKCGHVAMDLQGHK TTMTMKLTPIKGYQDISKKASLYTTVSSSGNGPKTSSYQAYVWLNDDQMIQVTAQDAQTA QSTLKSALNALGIVAK >gi|302034473|gb|GL383162.1| GENE 107 96230 - 97606 900 458 aa, chain - ## HITS:1 COG:Cgl1561 KEGG:ns NR:ns ## COG: Cgl1561 COG0144 # Protein_GI_number: 19552811 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA and rRNA cytosine-C5-methylases # Organism: Corynebacterium glutamicum # 13 452 74 511 511 314 44.0 2e-85 MTQRVHQKRRKADPARRLAYSALLAVETHGAYANLALADHLRAAKLTGRDAAFATELVDG TSRGTGTWDRIIEAASCRAPAKLQPGVRVVLRMAAHQILAMRVPTRAAVASSVDLAGQVI GERVTGLVNAISRRISTHSLEEWATEIGGRDAVDVMALRTLHPTWIVKAFQDRLGADEVE DALLADNEPPVPTLVVRPGLAQRDELGSGTPTRYSPWGVVRPGNPSDVAAVREGRAGIQD EGSQLVILALVRAAKANSCFGQWLDLCAGPGGKSALLAGLANQHDTSLTAVELHEHRADL VSKALRTIPGDHRVMTADGTHPPLPKQSFAAVLADVPCSGLGSLRRRPEARWRRTPTDVE ELTQLQRRLLISAVNLTRPGGVIGYVTCSPHRAETIDIINSACATLPVDVLDAPAMLPNI PNIAASGNTNTIQLWPHRHGTDAMFCALLRKRDESGTY >gi|302034473|gb|GL383162.1| GENE 108 97603 - 98550 300 315 aa, chain - ## HITS:1 COG:ML0552 KEGG:ns NR:ns ## COG: ML0552 COG0223 # Protein_GI_number: 15827204 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA formyltransferase # Organism: Mycobacterium leprae # 1 313 3 316 318 216 44.0 4e-56 MRLLFAGTPDVAVPTLTALVADPRHEVAAVLTRPDAAVGRHRTPRPCPVAKAAEELGIPA IKATSVKSGEGHDAITSLDADVAVVVAYGGLIPADLLAVPRHGWINLHFSLLPRWRGAAP IQRAIMAGDEETGACVFQLVESLDAGPVYRTMTVPIGPMTTAGELLDELAHTATPLVIEA LEDIEAGVEPTPQSVEGVTIAPQIHPDDVRVTVTAAAQEIDNLVRGVSPTPGAWAELDGK RFKILRTRCLEAGDGVPSTVATAQPGQLVATRKQLFLGTGSQPLELLQVQAFGKRAMSGA DWARGADIDAGTRLR >gi|302034473|gb|GL383162.1| GENE 109 98569 - 100578 222 669 aa, chain - ## HITS:1 COG:Rv1402 KEGG:ns NR:ns ## COG: Rv1402 COG1198 # Protein_GI_number: 15608540 # Func_class: L Replication, recombination and repair # Function: Primosomal protein N' (replication factor Y) - superfamily II helicase # Organism: Mycobacterium tuberculosis H37Rv # 23 668 6 654 655 336 38.0 1e-91 MTAPLLETTSWIAHVAVSSGLAHLDRPFDYLIPDDLVDRVQVGVRVRVKLAGRLCDGVVV AVDHEQQPGVTLAPVEKLVSDQVVATPDQLNFARHVADHWAGTLDEVLRWAIPTRHATTE AANPPPWPTPMTTMPSGTLTALDRGRRFLALLKAGERPRAHWRVSPVCGPGDDDHLGDWG NGLLQAVCATLTSGRSAVVCCPTVDDVITLHERFQAVLGAGTVAVLHADQPASTRWRHYL AVIRGTAKVVVGTRSAVMAPMTDLGLIAVWDEGSDLHDEPRAPYPNTRDVAALRAQIDHC ALLLASYSCSVRSASWLGSGWLVGIGADRPTMRAVCAPVRIPGDSDIAMERDPLARSVRL PDLAMTTIRDGLLHGPVLVSVPRVGDLVTPSCARCRTPVRCSSCGGPVTGRRTESGVNLH CTWCGSHLPPWRCPECGSTEVRSGIVGATTTAAELGRAFPDVPVVDSSGNHVRERVDSTP RLIVATPGAEPTPESGYACAVILDAVSSLSRPGLAAVEQTVDRWMAILALVRSVRDGGRA VIVGPSEDAALQAMVRNDPVGWATRELADRREAHFPPAVPCGIVDGDPKAVATAAQRLRE WFGTDLEMLGPAPQPRRASESERDRIIVRPRGTMPLAELSQGLFRLRSKHTMSREPGSLR VVIDPANLL >gi|302034473|gb|GL383162.1| GENE 110 100626 - 101819 949 397 aa, chain - ## HITS:1 COG:ML0544 KEGG:ns NR:ns ## COG: ML0544 COG0192 # Protein_GI_number: 15827200 # Func_class: H Coenzyme transport and metabolism # Function: S-adenosylmethionine synthetase # Organism: Mycobacterium leprae # 4 391 6 399 403 497 67.0 1e-140 MPTRLFTSESVTEGHPDKIADAISDAVLDAMLTEDSHSHAAVETVVTTGQVMVCGEVTTE AYVDIADIARSRILDIGYDSSSKGFDGASCGVSVAIDAQSPDIAQGVTAAYETRHGSTDL IDSQGAGDQGLMFGYACTETPSLMPLPIDMAHALSLQLTKVRKEGALDYLCPDGKTQVTI RYNEDDKPVAVDTVIVSSQHRAGIDLDATMTPDLRRLVIDPVLERYDLDHKDMRVLVNPT GKFVIGGPMGDAGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSGAYAMRWVAKNVVA AGLADRCECQVAYAIGAARPVGFRIDTFGTNHVPETVIERAVGEVFDLRPGAIIADLDLL RPIYSQLVAGGHFGRELPGVTWELTDRAEALAATARL >gi|302034473|gb|GL383162.1| GENE 111 101859 - 103091 639 410 aa, chain - ## HITS:1 COG:Cgl1566 KEGG:ns NR:ns ## COG: Cgl1566 COG0452 # Protein_GI_number: 19552816 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantothenoylcysteine synthetase/decarboxylase # Organism: Corynebacterium glutamicum # 4 405 13 416 420 323 47.0 5e-88 MSVVVLGVGGGIAAYKACLLARLLSEVGHEVHVVPTRAALEFVGRPTWEALSGHPVHTEV FDDVPDVEHIRLAERADAIVVAPATADLLARLAGGHADDLLTTTVLATSAPVLLAPAMHT GMWQNAATVDNVATLRRHGLVVKAPATGRLTGRDSGPGRLPDPDEIAEFVDLLITVPECA AAMAQQDLAGKRVVISLGGTREAIDPVRYLGNSSSGRMGRAIAQVAAARGADVHVVAAHV DVAIPSDVQITRIDSTEDLAEAMDDLAKQADIVIQAVAAADFAPVAVDTKIKKHEGDDAT GATMALQLHQTPDVLARICSQSVQNRVVVGFAAETAPDRDQFLKLAQAKLARKGCDLMVV NDVSGGKVFGKVGTDVTMVHQQGPGRRITGSKSQAAVAILDEVRALLATQ >gi|302034473|gb|GL383162.1| GENE 112 103104 - 103451 411 115 aa, chain - ## HITS:1 COG:MT1435 KEGG:ns NR:ns ## COG: MT1435 COG1758 # Protein_GI_number: 15840849 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, subunit K/omega # Organism: Mycobacterium tuberculosis CDC1551 # 5 82 54 131 133 99 69.0 1e-21 MTETTPEGIVNPPIDQLLEHVDSKYRLVLFAAKRARQINAYYSQLAEGLLENVGPLVETT NQEKPLSIAMREIQAGVVEAHEMDAEEIAAQAAAAQEAPAIELDDPFADLADPNA >gi|302034473|gb|GL383162.1| GENE 113 103480 - 104091 388 203 aa, chain - ## HITS:1 COG:ML0541 KEGG:ns NR:ns ## COG: ML0541 COG0194 # Protein_GI_number: 15827197 # Func_class: F Nucleotide transport and metabolism # Function: Guanylate kinase # Organism: Mycobacterium leprae # 21 197 25 202 210 173 53.0 2e-43 MSSVPVIPQARGLRHTGPVTVAVVSGPTAVGKGTVVGALLRSHPEIVVSRSVTTRPPRPT ERDGIDYDFITPEQFDKLVDGEGLLEWATVHNSHRYGTPRGPVERAVADNRTVVLEIDLQ GARQVRETYPQATQIFLAPPSWEELVHRLIGRGTETPEQQKQRLETAKVELANADEFDAV VVNDTVDHAVAHLVELLSLTKSD >gi|302034473|gb|GL383162.1| GENE 114 104146 - 104466 259 106 aa, chain - ## HITS:1 COG:no KEGG:PPA1189 NR:ns ## KEGG: PPA1189 # Name: not_defined # Def: integration host factor # Organism: P.acnes # Pathway: not_defined # 1 106 1 106 106 157 100.0 2e-37 MSIPTLSPEQLSAAREAATRARRVRADFKAKVRSGNITLSEALDKAANDEVLAHVKVVDL LKALPRVGDKRAAEIMEHLEIAPNRRIRGLGHHQIAGLRAEFDQRS >gi|302034473|gb|GL383162.1| GENE 115 104409 - 104729 185 106 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSLLHEQPKAVQAKEWVWTRAPPIQVCSASARQRMIVSTGDPMETIGTLVRLVVGCVLFV EICSQFMIFGSWVFSAGQLKIISRIFRIAGISASRVHIAHLCRERV >gi|302034473|gb|GL383162.1| GENE 116 104562 - 105347 172 261 aa, chain - ## HITS:1 COG:MT2608_1 KEGG:ns NR:ns ## COG: MT2608_1 COG0781 # Protein_GI_number: 15842067 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Mycobacterium tuberculosis CDC1551 # 39 168 10 144 166 93 40.0 3e-19 MSTNTVPTPDDEGPTEWIGDLEVRRVSGDIQEHADLSTRSKARKQALDILFEADLIGTDP LEVLAARPGVFTNPVRPFAADLVRGVAATQVGLDSVLTDCLSEGWTLARMPRVDRILARL GAFEILHTDTPNPAVISEAIELSEEFSTDDSAPFLNGLLGAVITHGPARVEDQPSDDAAS LTCPAPDGGSEQPPITVDDVGSMASSSDSFPAEVGNVDTTSGNASDPENSADDFELTGGE HPTSKDHELATDLHKKDTTDD >gi|302034473|gb|GL383162.1| GENE 117 105344 - 105913 661 189 aa, chain - ## HITS:1 COG:ML0522 KEGG:ns NR:ns ## COG: ML0522 COG0231 # Protein_GI_number: 15827184 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) # Organism: Mycobacterium leprae # 4 187 3 186 187 246 63.0 2e-65 MVISTNDIKNGTVLNLDGQLWTVIWFQHHKPGKGNTVVRTKLKHVLSGKVVDRTFNSDVK IESAEVDRRDMQYLYQDGDTYIFMDESTYEQLPIPTEVVGDAKDFMLENQTATVALHEGN PLYIDLPASVELEITYTEPGLQGDRSTGGTKPATLETGREIQVPLFITTGEKVKVDTRSG DYLGRISEK >gi|302034473|gb|GL383162.1| GENE 118 105827 - 106042 134 71 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVLEPDDRPQLAVKVENGAVLDVIGGDNHRSGPFGVVGWGDGRVGTASRSSPPSISVAES QCGPLLRKALP >gi|302034473|gb|GL383162.1| GENE 119 106190 - 107140 722 316 aa, chain + ## HITS:1 COG:Cgl2657 KEGG:ns NR:ns ## COG: Cgl2657 COG2326 # Protein_GI_number: 19553907 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 28 316 19 306 306 398 68.0 1e-111 MYDLGSSQLPTSFDPATDSDQHSLREFIDLVADAGYVVDSDEHGDDPELIAPDGSAVETW HEDYPYPNLMDRREYETQKRLLQIELLKLQYSIDDTGERHVIIFEGRDAAGKGGAIKRFS EHLNPRRCRVVALDKPSDRELGQWNFQRYIQHLPTAGEIVLFDRSWYNRGGVERVMGFCT DEEHRIFLRQAPILEEMMIESGIHVTKFWFSVTRQEQRTRFAIRQLDPVRRWKLSPMDLE SLGRWDDYTRAKEEMFAATDTDAAPWICIKSNDKKRARLNAMRYFLSQYDYEGKDVDVVG QPDPRLVRRARDMVGD >gi|302034473|gb|GL383162.1| GENE 120 107282 - 108382 652 366 aa, chain + ## HITS:1 COG:SPy0818 KEGG:ns NR:ns ## COG: SPy0818 COG2843 # Protein_GI_number: 15674859 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) # Organism: Streptococcus pyogenes M1 GAS # 39 323 86 377 430 103 28.0 5e-22 MPSRSTVEPTPARATSATPTKIATTQPLIHRNTNGSLTVTVSGDLLWHPSTWGTAREDGH GKNDFAPIFGTVAPILRNADVSICHEEVPVAPKGSQYSGYPEFAVPAEIAKGIAAVGFDA CSTASNHSFDRGLPGVKATLDALDAAHVKHSGTARTKEEADTPVIVSHGLKLGLVSGAYG LNGSTPPKGKSWAWSDIEADHLIKRAEAAKKAGADIVIVAAHSGLEYHHEPTGEQIRLAQ LLTASPAVDMVYCHHSHVVEPWTRMNGKIVMYGLGNLVAQQSSNMPGTDEGVVGRVTFTV RSGKVSTTKAEYIPILIGSKNDGPIRIHAVDTELKSGMGNQARLKSAQQDISRIVTSLGV DGVTEA >gi|302034473|gb|GL383162.1| GENE 121 108425 - 109510 865 361 aa, chain - ## HITS:1 COG:ML0518 KEGG:ns NR:ns ## COG: ML0518 COG0337 # Protein_GI_number: 15827180 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate synthetase # Organism: Mycobacterium leprae # 4 360 10 361 361 285 47.0 1e-76 MNLVEVATTKPYRVRIGSGAVHELAGLVAGRRAAVVCPQTLVHLVPRFGIDDLVVIEVPD AEAAKTPEVLVNGWRRLAEANMTRGDIIVGFGGGATTDVAGFLAATWMRGIDVIHVPTTV LAMADAAIGGKTGVNIPAGKNLVGAFHEPIGVLCDTELLTTLPAREVRSGLAEIVKCGFI KDPVILDVISNHPRLALDVTSQTFVEVLTRAITVKAGVVSADLHERTSSREEVGRERLNY GHTLAHAIEAHKHFTWRHGEADAVGMVFAAELSHRYLGLSDEVVARTRTILSEIGLPVTC DEIKWADLRKTMNVDKKTRVDPQTGRQVLRFVGIHKPGQVAMIVDPDEAALAECYDRCSA R >gi|302034473|gb|GL383162.1| GENE 122 109513 - 110016 420 167 aa, chain - ## HITS:1 COG:BS_aroI KEGG:ns NR:ns ## COG: BS_aroI COG0703 # Protein_GI_number: 16077384 # Func_class: E Amino acid transport and metabolism # Function: Shikimate kinase # Organism: Bacillus subtilis # 2 162 14 176 186 103 38.0 2e-22 MIALIGAPGSGKSTVGPLLAQRLGEEFVDVDAVIEQAEGRDIPEIFLIDGESYFRKVERR ETLAAIERGGVVSLGGGAPADVEVGNALDRMCVVWLDVSARTAADRVGLKDTGRPLLGGQ VHSQLVRLMKERRAVYQRPATIRVATDTLTPEQVVDVIVSELADLKE >gi|302034473|gb|GL383162.1| GENE 123 110013 - 111209 737 398 aa, chain - ## HITS:1 COG:MT2615 KEGG:ns NR:ns ## COG: MT2615 COG0082 # Protein_GI_number: 15842074 # Func_class: E Amino acid transport and metabolism # Function: Chorismate synthase # Organism: Mycobacterium tuberculosis CDC1551 # 1 392 1 392 401 440 65.0 1e-123 MLRYLTAGESHGPALVATMEGIPAHVQVGAVEISEELRRRRLGAGRGARMSFEADELELL AGFRHGETLGDPLAIRIGNSEWEKWRTVMAPGPVAPEDLAGHARAAALTRPRPGHADLAG MQKYDFDEARPILERASARETAARVALGAIAKAFLKQSLGIEVLSHVVSLGPVSAPNGPR PDPSDLTRIDADPVRCADSVTSKRMVAEIEACRKEGDTLGGVVEVLAYGLPAGLGSHSQG DRRLDARLAGALMGIQAIKGVEFGDGFDLTRRRGSQAHDWMEPTEGGIHRVSDRAGGTEG GMSTGQILRVRAAMKPIATVPRALPTVDVTTGEAANAHHQRSDVCAVPAAGVVAEAMAAL VLAECALEKFGGDSVTETRRNAQAYLDRLAARGLAVAP >gi|302034473|gb|GL383162.1| GENE 124 111223 - 112029 469 268 aa, chain - ## HITS:1 COG:ML0515 KEGG:ns NR:ns ## COG: ML0515 COG0169 # Protein_GI_number: 15827177 # Func_class: E Amino acid transport and metabolism # Function: Shikimate 5-dehydrogenase # Organism: Mycobacterium leprae # 4 254 15 270 278 123 34.0 3e-28 MHCAVIGHPVAHSLSPAIHRAAYQVLGLEWSYQAIDVEPGGLRAFIEGLDGSWRGLSVTM PHKADLVELGETDATVDMLGAANTWVCRDGTTIVRNTDVTGAEAALRARGVTDVEKVVML GAGATARSVLAAAIGMGAGEAVVMSRSRERSTKILKLADGLGIRVAWLPFESEPPRCNLI VSTVPAGSLIRRAEDLAARANAVFDVVYDPWPTPLAVAGKIAGATVIDGLDLLAGQAVGQ VQLMTGYPVPMDVLRSTAQNGLAEHARL >gi|302034473|gb|GL383162.1| GENE 125 112061 - 113170 989 369 aa, chain - ## HITS:1 COG:MT2630 KEGG:ns NR:ns ## COG: MT2630 COG1559 # Protein_GI_number: 15842091 # Func_class: R General function prediction only # Function: Predicted periplasmic solute-binding protein # Organism: Mycobacterium tuberculosis CDC1551 # 40 356 62 405 417 159 30.0 8e-39 MSGPFNEHDDPKAEFWYKLRSAVAVILSLTVLVGGCVFVGVKVYDGYISYKSADDYLGDG EKDVLVRVPAGASVSEVGSILLDNDVVKSTKAYNKALRDSESDVTIQAGQYKLKTHMNAA KAVSILDNPDNIQRTRVTLPEGLTTEQQFGIMAKGTTMPVGSFQNAYKQTAKLGLPVWAK GRPEGFLFPDTYEVGSNPTPLEILQMQTNQFAKQVNTMNFIGQAQTIKRSPYDALIVASI LEREAKKPKDMQMIAGIIYNRLQQGMKLESDATVLYANHVEGKLTTNDEQRAKDSPYNTY LYNGLPPTPIDNPGATSMEAAVTPIKSDYLYWVVTDPDKGTTAYSKTLAEHEKNVKKFQA WCQDHKGKC >gi|302034473|gb|GL383162.1| GENE 126 113167 - 113649 288 160 aa, chain - ## HITS:1 COG:Cgl1593 KEGG:ns NR:ns ## COG: Cgl1593 COG0816 # Protein_GI_number: 19552843 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) # Organism: Corynebacterium glutamicum # 13 144 16 158 182 90 46.0 9e-19 MNPAERPDTSLCGVRLAIDWGKARIGVAASDRDAILAFPVETVHTADRPVQRLAEIVAEY EPVEVIMGLPVALNGTEQLAAQDVRDAGRQLAEAINPIPVRWVDERMTTRTAARALHEAG RNARKQRGVIDQAAAVAILEHVLEQVRLGQSETATGGADS >gi|302034473|gb|GL383162.1| GENE 127 113646 - 116324 2417 892 aa, chain - ## HITS:1 COG:Cgl1594 KEGG:ns NR:ns ## COG: Cgl1594 COG0013 # Protein_GI_number: 19552844 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Alanyl-tRNA synthetase # Organism: Corynebacterium glutamicum # 1 892 1 888 888 797 49.0 0 MRTAEIGQRFVDFFESKGHTVVPSASLLYNDPTLLFVNAGMVPFKPYLMGTEPSPWKRAT SIQKCVRTLDIDEVGKTTRHGTFFQMLGNFSFGDYFKNEAIQYAWELVTKPAEQGGLGFD PASIWVTVLGPGFHPDYPEGDIEAREAWRAAGIPDEQIQGRSLKDNYWHMGVPGPGGPCS EIYIDRGPAYGPDGGPEADEDRYLEIWNLVFETEDLSAVRAKDDFDIAGPLRSLNIDTGA GLERIAYLLQGVDNMYETDQVFPVIEKASEMSGKRYGARHDDDVRLRVVADHVRSGLMLM TDGVTPGNEARGYVLRRLLRRVVRAMRLLGVADPVLPELLSVSRDLMADSFPDVLTQWDR VIGAATAEEDTFRRTLSSGTAMLDAAVVETKASGSKTLSGEKAFQLHDTYGFPIDLTLEM AAEQGLEVDRNKFTALMAEQRARAKADSQAKKGLLTDREAYSQVRALGETPFLGYTDLTV DTTVTGIIANGTSVTAAEPGAVVEIVLAETPFYAEMGGQDSDSGIIRANGIDFEVLDVQR PVPGLIVHKVHLDGDLAVGDRVTALVNPATRFGACQAHTATHVIHAALRELVGPSATQAG SYNKPGYLRFDFSATKGLSDSLKDEIEERCNVAIHDDFEVTDTQMPLEDAKAMGAMAMFG EKYPPIVRVVELAGPWSRELCGGTHVASTGRIGMLSLLGEQSVGSGTRRVEALVSTDAFR HMAAERALVNELTGILKVQPDQLADRVSKLAADLKEAERKLGAARTRELLGQVDDIVAGT TPAGSFDLVAAKVPGVAGSDLRTLAAEIRARVKDRPAVVTLIGGTHDKPAMIVATTESAR AAGAKAGALIKVGVAPIGGRGGGKDDIAQGAGSDPTGIDAALRAVNTELTAL >gi|302034473|gb|GL383162.1| GENE 128 116470 - 116931 454 153 aa, chain - ## HITS:1 COG:no KEGG:PPA1177 NR:ns ## KEGG: PPA1177 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 153 1 153 153 224 100.0 8e-58 MTLGQIAGLIAALAAVVLVALCAVPLLKLGGVLDEVRKAVCDVDESTVPILEEVKSTVVI TNGEISKLDQVIEDIHTISGHGTIVTGQAAELAQTFTQTVGTPMVKAAAFGEGVRRTIHR PKRRMRQSQVENTVSPTEVSHSATAAEGGGEQD >gi|302034473|gb|GL383162.1| GENE 129 116928 - 118316 1170 462 aa, chain - ## HITS:1 COG:ML0510 KEGG:ns NR:ns ## COG: ML0510 COG2256 # Protein_GI_number: 15827173 # Func_class: L Replication, recombination and repair # Function: ATPase related to the helicase subunit of the Holliday junction resolvase # Organism: Mycobacterium leprae # 1 453 26 468 473 457 58.0 1e-128 MVSEDLFGNVTSAQSDATSGGSLDTPNPDAPLAVRLRPRTIDEIVGQQHLLTPGSPLRRL AEGTGAMSVFLWGPPGVGKTTIASVVSHATNRRFVEISAVTAGVKDIRRELDTARRQLAL GQPTVLFVDEVHRFSKAQQDVLLPAVENRTVTLIAATTENPSFSVISPLLSRSLLLTLKP LTEADVSSLLDRALSDPRGLRTESDRRYVLEDDARADLLQLAAGDARRALTYLEEAAAGA SAAGTDTITSQIVSTAVDRAAVRYDRDGDQHYDVISAFIKSVRGSDVDAALHYLARMIEA GEDPRFIARRLIILASEDIGMAAPSVLQTCVAAAQAVQLIGMPEARLNLAQATIAAATAP KSNAVITAIDGALVDVRAGKGGEVPAHLRDAHYSSAHDLGHGVGYRYAHNFPHGVAKQQY LPDDIASTRYYDPTDHGNEAAIAQRLSQIRALLGRDIEEEKS >gi|302034473|gb|GL383162.1| GENE 130 118418 - 120238 1612 606 aa, chain - ## HITS:1 COG:Cgl1597 KEGG:ns NR:ns ## COG: Cgl1597 COG0173 # Protein_GI_number: 19552847 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aspartyl-tRNA synthetase # Organism: Corynebacterium glutamicum # 1 589 1 591 608 852 71.0 0 MLRTHDAGTLRASDIGKEVTLAGWVGHRRDHGGVAFIDLRDASGLAQVVIRDEILESSGA HDLRNEYCIRVTGVVEARPEGNANPNLPTGEIEVAITELEVLNPSAPLPFQIDEHVSVGE DARLKYRYLDLRRPHQHEALVLRSHVTHAIREVLDRHNFYDIETPTLTRSTPEGARDFLV PARLAPGCWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQPEFTQLDVEMSF VDQDDVIALAEETMAACWKIIGVDMPTPLPRITWHEAMDRYGSDKPDLRFGNEITEVTDF FANTAFRVFQAPYVGAVVMPGGASLPRRQFDAWQEWARTRGAKGLAYITISDEGVPEGPV AKNISEEEKAGIAEKVGAKPGDAIFFAAGSKTSSQELLGAARLEIGRRCELFDPSDWAFC WVVDAPLFKPTKEAEASGDVAVGTGAWTAVHHAFTSPTPDCLDTFDTDPGSALAYAYDFV VNGNEVGGGSIRIHRRDVQERVFNVMGIGPEEAQEKFGFLLDAFKFGAPPHGGIAFGLDR LVMLLGGFETIRDVIAFPKTGNGYDPLTAAPAPITPAQRREAGVDAKPKEPSGGQTSNAE AYKSTT >gi|302034473|gb|GL383162.1| GENE 131 120419 - 121489 871 356 aa, chain - ## HITS:1 COG:no KEGG:PPA1174 NR:ns ## KEGG: PPA1174 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 356 1 356 356 729 100.0 0 MTIAIKMGFLDDSPIVDDQGRLVSRGGGTALVERLLDMYPGAVVVNYEDRQCDGFEARKL TSLEPLETLVINLDVIDSVGVFQTMHREGAEPKILNLQWLPPSHYHHKVNFAAMGLAYAL FPTLCSGERTAGEVTELVRRWTISPLAHQARVAWIQPGIRDDLAREHVDPEIPTVLYPAI HLTETKRPKIFLDVMNRVAADMDVRMEARLSQRDLASVMAMKMSSPKWASVGPLFGQREE YWESLARMTAFLATAKNEAYGFEYLEALVAGAIGVFPDTTWARKTVPEDYPYFYRTSDEA VSMLKEILNDPQTARNAINELAGGSIRDWILEHNQRSGGNEAMRKQIEEWFPEIQV >gi|302034473|gb|GL383162.1| GENE 132 121609 - 122253 432 214 aa, chain - ## HITS:1 COG:MT1725 KEGG:ns NR:ns ## COG: MT1725 COG1309 # Protein_GI_number: 15841142 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mycobacterium tuberculosis CDC1551 # 9 209 6 199 207 88 32.0 7e-18 MSQSQCARSSRRGPRGEVGAARAAILAAARSLFLAGDFQSVSLRAIAREAEVDTSLVSYY FGSKQSLYNEAMSLPNGPHRIIAEVCSRTDPDHLGEALVKAFIDAWDGHLGLGGPDPQMQ GVVQALLTQPDAFDMMRQFYTEEILAPVVNLLIPRFGAEEAGIRASLGLSQLLGIFTARY VIGLQSLANLPAAELIGREGPALQSTLTGPTING >gi|302034473|gb|GL383162.1| GENE 133 122388 - 126770 3332 1460 aa, chain + ## HITS:1 COG:CAC2401_1 KEGG:ns NR:ns ## COG: CAC2401_1 COG1924 # Protein_GI_number: 15895667 # Func_class: I Lipid transport and metabolism # Function: Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) # Organism: Clostridium acetobutylicum # 1 663 7 663 663 704 51.0 0 MGLDVGSTTIKAVILDPDENILFEDYRRHHADITGAMASLLGDAADALPGAKVRTTVTGS AGLGTAEALGLTFIQEVMAETAAVQRWNPDADVLLELGGEDAKITYLKPVPEQRMNGSCA GGTGAFIDQMATLLHTDTPGLNDLASRAKTIHPIASRCGVFAKSDLQPLINEGARHEDLA ASVLQAVATQCIAGLACGRPIRGKVIFLGGPLHFMPSLRDAFSRVLDGKVDAYITPDRAQ LYVAMGAALTSTSEPVDLAETAKRSRHARTQNGISQSMPPLFRSEEELDEFNRRHSHAKL PRLPLHDARGSLFLGIDAGSTTIKSVLIDESLNIVASHYASNEGDPVSAAVQILADLYDT MPAEATIARTCTTGYGEGLVKAALEAEDGEVETMAHYRAADHLLPGVTAIIDIGGQDMKY LRVVDQVIDSISVNEACSSGCGSFLQTFAAGMDTDIESFSSMSLLAQHPVDLGSRCTVFM NSSVKQAQKEGASPADIAAGLSYSVVRNALYKVIKLTDPAQLGNKVVVQGGTFLNNAVLR AFEKLTGREVVRPAEAGLMGAYGAALTAHARFHAGEPTTSEGLRERAELDGFAVETHRDD CALCQNHCQRTIATFSDGRVFVSGNRCDRGAEVNNRKMAKLPKSELPNVFEDKYKRLFSY RRLTAKKAFRGDLGLPRALNMYENYPFWFTTLSALGYRVMISGRSSHALFEKGMESIASE NICYPAKLNNGHVEDLVQRGVKRIFDPCIRYEQVSVADADAHFNCPVVASYPEVIRANVE SLRDKDVELISPFLSLADPDKLAERLAEVFADDDVTVDEARRAIAKGLEEDKAFHDEIRK MGEDALAYMAEHNVPGIVLAGRPYHVDPEIHHGIPEMVNSLGMAVLTEDSVAHLGADLLE RPLRVRDQWMFHSRLYQAAAFVGSRPDLELVQLNSFGCGLDAITTDQVREILAARDRIYT TLKIDEVSNLGAARIRMRSLQAASKERASHNRNLVTHPLSDDRVPFTKEMKATHTILVPQ LAPYQTSIAEAALRASGYQVEVLKQASRENIDYGLSVVNNDACFPAIVVIGQLVSALKSG KYDLDHTTLFLTQTGGMCRATNYIGLLRKALKDAGFGNIPVIAASLQGVEDNPGFSLTAP LIHRMVQAITLGDLLQKVHLRTRPYEAVPGSADSLMRRWTTIVREHFLNGGHSTTWGRRT SYKAMINSIVDNFEHLELVDGPRKPRVGVLGEILVQFHPDANNHIVETIESEGCEAVLPG LMWFVYNCLSAGDYNYKTFGTDKWSRHVKKAFRALLMHYQKPVTTALRKSTRFEVPTPIT ELMADAQRIVQLGNQAGEGWYLVGEMVDMIREGVPNIAVVQPFACLPNHVTGRGIFREIR RQFPQANVVSVDYDPGASQVNQLNRIKLMAATARDRNVNEERDVGQAVRPEPDEKIPISP PTASRPDLKGKPVMELFVHL >gi|302034473|gb|GL383162.1| GENE 134 126804 - 127367 336 187 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229859876|ref|ZP_04479533.1| acetyltransferase, ribosomal protein N-acetylase [Streptobacillus moniliformis DSM 12112] # 1 180 1 182 187 134 32 1e-29 MKLVGTHPIHTDRLVLRRWSVDDAQQMYDNLASDTEATRFVTWPPHPNVDATRLLLTGWV RGYDDPATFNWAVWLDEVIIGQIAVVDVDTRVNLAELGYCLGKRWWNHGYATETVKAVMS YLLDTAQVNKVEARHDPANIASGRVMENAGMVIEGLRRACVMDSCGPRDSQYHGLLRSEW RGQQADD >gi|302034473|gb|GL383162.1| GENE 135 127360 - 128052 482 230 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4231 NR:ns ## KEGG: HMPREF0675_4231 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 230 1 230 230 421 99.0 1e-117 MTDRREVTCRRWRATFFVLASLASLTWAFAGVLNPAMSQLHAFVSEYSARDQPWRYLFQT TDVIMGTLLCLAGLATLVWARHRPLGRQGWSGVGFVAGGFFSVLDALVTMDCSPTRSQAC MAAEEAGHVSVNHIVHVGTSTIVVVGFALPILLLNSTMTRFRGFGLVVTWAWVVFTLLNG IGAVGWFVGTPMDYTGIWQRFSLGLGTLWWLILAADDIVTARVQDRARSC >gi|302034473|gb|GL383162.1| GENE 136 128109 - 129473 1445 454 aa, chain - ## HITS:1 COG:all5012 KEGG:ns NR:ns ## COG: all5012 COG0124 # Protein_GI_number: 17232504 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Histidyl-tRNA synthetase # Organism: Nostoc sp. PCC 7120 # 8 433 13 447 462 254 36.0 4e-67 MARLKPLSGFPEFLPSGQMVENHVTRILEETFELHGFAPIRTRAVEPMEQLTRKGEIDKE VYVVDRLHADPHDTRSGKDRLGLHFDLTVPFARYVLENAGHLYFPFRRYQIQKVWRGERP QEGRYREFTQADIDIVGDQTLAEHHDVETPLVMLSALERLHTELGFPTVTMHVNNRKLSE GFYRGLGIADPMAVLQRVDKYDKIGPDAVRKLLVDELNLSDDAAAKCVALASIQSTDDSF IAKVRELGVANDMLEEGLDSLNRVVAAVNKAVPGRMVANLKIARGLDYYTGTVYETELTG HESMGSVCSGGRYESLASDGKHVYPGVGISLGLTRLLAPILSRGELSSSRSVPSAVLVAV NTEEDRATSEVIASALRSRGIPCEVAPKADKFGKQIKHADRRGIPFVWFPGVKHADYRDA DTVKDIRSGDQVEADAGAWNPPTEDLHPGVIGTW >gi|302034473|gb|GL383162.1| GENE 137 129573 - 130244 487 223 aa, chain - ## HITS:1 COG:Rv2581c KEGG:ns NR:ns ## COG: Rv2581c COG0491 # Protein_GI_number: 15609718 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Mycobacterium tuberculosis H37Rv # 1 220 1 219 224 160 42.0 1e-39 MFIASFITGPFQTNCYLLAREQGSECVIVDPGMGAEEFLGDALRTHHLVPVAIAVTHGHI DHIGSARQVGDEYGIPVLCPRDDRHLLSDPMAGLSDFARPLIEQWYGSTTLREPEQVVDV EPFSHHQFANLDLEFLHAPGHTPGCSMIRTIDAEFGPIVMSGDVVFAGSIGRTDMPGGDP AQMSYSLSDVVWSLDDSTHVLPGHGGPTTMANERLTNPFLGRR >gi|302034473|gb|GL383162.1| GENE 138 130237 - 131520 1178 427 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4229 NR:ns ## KEGG: HMPREF0675_4229 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 427 1 427 427 659 99.0 0 MNTFGSLSGKMGRMSHAQAPQSFGRVDDDGTVYVRTSDGERSVGQVPDSTSEEALEFFVR RYRALETEVSLLESRVSSGTASPEEARSAASKLVTSIREANAVGDLESLAARVEALTPTI DAKAETRREERAEAKARAKQAKEEMVAQAEAIAAGSDWRGGIGKFRDLLDQWRRLPRIDK TTDDELWHRFSGARTAFTRRRKQHMAEQNHLRERARIVKEHIIEEARPLAESTAWGETSR QFRDLMNRWKAAGPAPRDVDDKLWKEFRAIQDTFFDARTAAQSQQDEEYRGNQEVKEQLL DEAEKDILPVKDIEEAKVKLRAFLEKFNEVGRVPRDAMKRIDARVRDLERQVHSAEEAEW KRTDPQARERARATVDMFSAHIDKLNAQVEKAEAAGRTKDADKARESIKTYQTWLDEAQK ALDEFSA >gi|302034473|gb|GL383162.1| GENE 139 131585 - 133909 1609 774 aa, chain - ## HITS:1 COG:Rv2583c KEGG:ns NR:ns ## COG: Rv2583c COG0317 # Protein_GI_number: 15609720 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Guanosine polyphosphate pyrophosphohydrolases/synthetases # Organism: Mycobacterium tuberculosis H37Rv # 47 774 58 788 790 849 57.0 0 MTDDSVYGPYGSGKGTLGKPKPGQQRPQPRMRMRERIVRWGTPKPPAPTQSVTDPLISVV LANHPKADTAIIERAYRTAEHYHRGQSRKSGDPYITHPLAVTMILAELGMDERTLCAGLL HDTVEDTSYTNEQLTADFGEEIALLVDGVTKLDKVQYGDSAKAETIRKMVIAMSRDIRVL VIKLADRLHNMRTLGFLRPDKQNRIAKETLEIFAPLAHRLGMNAIKWELEDLCFSTLNPK LYDEIVHMVAERAPQREAQLKDVITIVRQDLDEAGIKAIVYGRPKHYYSIYQKMVVRGRD FSDIYDLTGLRILVDTPRDCYAALGVMHVRWNPLPGRFKDYIAMPKYNMYQSLHTTVLGP GGQPVELQIRTHEMHRRAEYGVAAHWKYKENPNAVGRGIQPDGTDLSWVQSLNQWSKEES DPSEFLDSLRFEINSREVYVFTPKGDVMSLPQGATPVDFAYAVHTEVGHRCIGARVNGKL VTLDTKLNNGDVIDILTSNAPDAGPSRDWLGFIASPRARSKIKSYFTKERREESIEAGKD AIAKQLRQAGVPLQSLLTVEYLSAVADDLRVPGINALYAAVGEHNASAQSVVEKLIALGG GPEEATADVEEELAVGVKAPRRRRSSETGVMVDGDPDMLVKLARCCTPLPGDPIMGFVTR YDGVSVHRTDCSNAKNLLEHPERIVSVSWSDDRQESYQVTIQVEGLDRAGLLVDTFRVFA EQGVSVISANMSTSKSHLARLRLTFEAPDPTHLKHLTESIRRISGVYDVFRVKS >gi|302034473|gb|GL383162.1| GENE 140 134039 - 134386 210 115 aa, chain - ## HITS:1 COG:Cgl0753 KEGG:ns NR:ns ## COG: Cgl0753 COG1226 # Protein_GI_number: 19552003 # Func_class: P Inorganic ion transport and metabolism # Function: Kef-type K+ transport systems, predicted NAD-binding component # Organism: Corynebacterium glutamicum # 1 99 247 344 353 67 38.0 7e-12 MLRESGADAVVTSADAVGRLLGLSSVNPYVGTVVDDLLSSSKGMEVVQRMVSESEVGARP ADIQNERVLAVIRNDVLRNFYDPSVGQLQAGDVIVVVRKAVPRRHESQTESDLVR >gi|302034473|gb|GL383162.1| GENE 141 134441 - 135133 488 230 aa, chain - ## HITS:1 COG:Cgl0753 KEGG:ns NR:ns ## COG: Cgl0753 COG1226 # Protein_GI_number: 19552003 # Func_class: P Inorganic ion transport and metabolism # Function: Kef-type K+ transport systems, predicted NAD-binding component # Organism: Corynebacterium glutamicum # 21 230 22 227 353 199 52.0 5e-51 MVSESPESSGRHSVFEQTARVKLPFKATEPFWELVKRLAWSAVLLLISTLIVWVDRDSYV DSTAGDGVSLIDAFYYSTVTVTTTGYGDITPVAPHARLINALIITPLRITFLVLLVGTTL EMLANEGRRGLLDSAWRKRMRNHTVVIGYGTKGRSAVNTLRNHDVPVEKIVVIDSRPSAV AEANRSGLAAFEGDATRRDLLRRAEISKAREVVITLNRDDSAILTTLTVR >gi|302034473|gb|GL383162.1| GENE 142 135136 - 135669 409 177 aa, chain - ## HITS:1 COG:alr4582 KEGG:ns NR:ns ## COG: alr4582 COG0503 # Protein_GI_number: 17232074 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Nostoc sp. PCC 7120 # 8 163 3 161 172 169 54.0 2e-42 MTYRKDLIASLIRDVPDFPEPGVTFKDITPLLANPNGYAAAISELVDTASRDVDVVLGME ARGFMFAGPVALSLGAGFVPVRKPGKLPGDVYSQSFVLEYGSATLTVHQDAVQPGSKVLI VDDVLATAGTVRATASLVEQLGAELVGVSVLIELSALGGREKLDRAGIGPVNAVLTI >gi|302034473|gb|GL383162.1| GENE 143 135666 - 136841 1056 391 aa, chain - ## HITS:1 COG:MT2663 KEGG:ns NR:ns ## COG: MT2663 COG0341 # Protein_GI_number: 15842125 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecF # Organism: Mycobacterium tuberculosis CDC1551 # 4 390 18 417 442 228 38.0 1e-59 MTDDMNAQTSSVATKRPSDGATGKKRKRSFTHALYTGEISYGFIQRRKVWYTITAVVIII SFIGLLVRGLNLGIEFKGGVQFRAPAHVATSTIDDVRKSVLSSGAPDMDATEVVSLGSDA VQVQTRALNNDETTKVQEAIAKATGTKMSSVTYSKVGSQWGEQITGKAIKALVVFLVLVM LQIWAYFRHWKMSIAALVALLHDLIVTIGIYALVGFTVSPSTVIGVLTILGYSLYDTVVV FDKVRENVQDIDKRDYTFAEGANRAVNQVLVRSINTTIVGVLPVAALLFAGAFVLGSGPL EDLGLALFVGMIVGAYSSIFIATPVFTQLREHEPAMKEHTARVLRRRERAAQKAPRVTAE TVAAEGPRDVTTITGSDRHQPRRSTRAERKK >gi|302034473|gb|GL383162.1| GENE 144 136843 - 138501 1112 552 aa, chain - ## HITS:1 COG:ML0487 KEGG:ns NR:ns ## COG: ML0487 COG0342 # Protein_GI_number: 15827164 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecD # Organism: Mycobacterium leprae # 2 544 42 596 597 291 39.0 2e-78 MIFLVIIIVMYVLMGVMRTWSPKLGLDLRGGTSVTLTAKTEDGKAPSATSLEQARLIIGQ RVNALGVGESSVKTMGDRNIVVSAPNVESSKLVEMVGQTAQLGFRMVYAEEPVSQKSPTP GKAKPSAPSALPTVEPSASASAAPDASASSKGGTTSSASQYNEKDPQSAAKMVKAAEEWK PTPEDQKAFEDYKCAKSVDSPGDKPLVTCDRERTMKYLLSPVAITGTQVVSADSGIPQGQ LSYVVNLKFNSIGTTSFSDATTYLCSKMSPQNQFAVVLDGKVISSPQLNGNTGTSCPING GEAQISGHFTQNSAADLANVLKYGALPLSFDISSVDNISPTLGGEQLRAGIIAGIIGLIL VGGYCLLYYRGLGLVTLGSLVIAGITTYAAMVLLGEAVGFTLSLAGIAGAIVAIGVTADS FIVYFERIRDEIREGRTLRTALQTGWAKARGTILMADGVSLLSAIVLFVLSVDQVKGFAF TLGLTTVIDLIICFFFTHPIVTVLGRTRFWGQGRRGSGLEAEHMGVTESQLLGRRSRRSA SRAKRTIESEEA >gi|302034473|gb|GL383162.1| GENE 145 138574 - 139005 404 143 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4222 NR:ns ## KEGG: HMPREF0675_4222 # Name: yajC # Def: preprotein translocase, YajC subunit # Organism: P.acnes_SK137 # Pathway: Protein export [PATH:pak03060]; Bacterial secretion system [PATH:pak03070] # 1 143 1 143 143 258 100.0 6e-68 MPLLASPLGGFMPLLIIFIVLIGFTLWQGKRQVKKQQEERVQLESRLEVGTRVVLSSGLF VTITHIGDKQAVVELAPGVEVSVLKQAIVRPAGDEEEFAFADDVPTENSTVHDDVATESA NDVLTSPEASAVNAHTSDEQPQA >gi|302034473|gb|GL383162.1| GENE 146 139066 - 140088 463 340 aa, chain - ## HITS:1 COG:Cgl1620 KEGG:ns NR:ns ## COG: Cgl1620 COG2255 # Protein_GI_number: 19552870 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, helicase subunit # Organism: Corynebacterium glutamicum # 6 337 31 362 363 410 64.0 1e-114 MEHSPVDPSAEPPEKAEEAALRPGALAEFGGQQRVADQLGLVLAASKSRGTTPDHVLLSG PPGLGKTTLAMIIASEMSAPIRISSGPAIQHAGDLAAILSSLVPGEVFFLDEIHRMSKPA EEMLYLAMEDFRVDVVVGKGPGATAIPIEIPPFTLVGATTRAGLLPGPLRDRFGFTAQLD YYEVADLERIVTRSAGVIGVELAEGAAHTIASRSRGTPRIANRLLRRVRDWADVHHESPV TPQGAETALDLYEVDPLGLDRLDRAVLHAVCLKFGGGPVGLSTLAISVGEEPQTVEEVAE PFLVRLGFLMRTPRGRVATDRAWRHLGLEPPPDSSGEGLF >gi|302034473|gb|GL383162.1| GENE 147 140142 - 140747 458 201 aa, chain - ## HITS:1 COG:Cgl1621 KEGG:ns NR:ns ## COG: Cgl1621 COG0632 # Protein_GI_number: 19552871 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, DNA-binding subunit # Organism: Corynebacterium glutamicum # 1 200 1 204 206 119 38.0 3e-27 MISHFSGMVSAAGPTWVVLDNHGVGIKVLCPPATAASARINQDMSLHTSLVVREESLTLY GFVEADDRDAFELVQTASGVGPKLAAAIMSVLDAAQLATAITEEDDATLCRVPGIGRKGA AKMILELKDKVAALTPRGASVSGATHVVAPWREQVAEGLVGLGWSAKDAEKAVDKVAALK EADPAMTIGNLMRAALRSLAR >gi|302034473|gb|GL383162.1| GENE 148 140744 - 141289 295 181 aa, chain - ## HITS:1 COG:Cgl1622 KEGG:ns NR:ns ## COG: Cgl1622 COG0817 # Protein_GI_number: 19552872 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, endonuclease subunit # Organism: Corynebacterium glutamicum # 1 171 1 171 213 155 50.0 3e-38 MGVDPGLTRCGVGVVEGGLGSPLKLIAVGVIRTPADLDHAHRLLRIHDGLEEWRDHTRPD AVAVEKVFAQHNRNTVTGTAQAAGMAMMIAARHGLPVALHTPSEVKAAISGSGRADKAQV GFMVARVLRLSAPPKPADAADAVALAICHLWRGGAARRIEAAVATQRRGRRVPRSWKDLA R >gi|302034473|gb|GL383162.1| GENE 149 141331 - 142125 986 264 aa, chain - ## HITS:1 COG:MT2678 KEGG:ns NR:ns ## COG: MT2678 COG0217 # Protein_GI_number: 15842143 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mycobacterium tuberculosis CDC1551 # 1 263 1 251 251 307 64.0 1e-83 MSGHSKWATTKHKKAAIDAKRGKLFARLIKNIEVAARLGGGDPSGNPTLYDAIQKAKKSS VPNDNITRAVKRGSGEGADAVNYETIMYEAYGPAGVAILIECLTDNRNRAVSDVRVAVTR NGGTMADGGSVQRLFQRKGVVSVSKTYEVEEGRKTETREVDEDQLMEATIDAEPEDIVDE GEVFEIISDPSAVVDVRKAVQDAGIDYDSAEVSFKPDFTQRVELEDARKLYRILDALEDL DDVQNVFSNVDIPAEVAAALDEEE >gi|302034473|gb|GL383162.1| GENE 150 142275 - 143042 427 255 aa, chain - ## HITS:1 COG:Rv1603 KEGG:ns NR:ns ## COG: Rv1603 COG0106 # Protein_GI_number: 15608741 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase # Organism: Mycobacterium tuberculosis H37Rv # 5 241 4 244 245 243 55.0 2e-64 MTGELTLFPAVDVQGGRAVQLQQGVASSERAFGDPLDVAQKWQGLGAQWIHLVDLDAAFG HGSNTKIISSVVEQLDINVEVSGGIRDQRSLESALSAGATRVNIGTAALEDPQWCDEVVG RYGEQVAIGLDVRGDQLTARGWTREGGKVLDVLARLEDAGCRRYVVTDVASDGMLTGPNY ELLGRICARTQGKVVASGGIATLEDLRRLRGLVPIGVEGAIVGTALYVGNFTLPAALDVC RAPIPADSSPMPPTD >gi|302034473|gb|GL383162.1| GENE 151 143055 - 143672 525 205 aa, chain - ## HITS:1 COG:Cgl2044 KEGG:ns NR:ns ## COG: Cgl2044 COG0118 # Protein_GI_number: 19553294 # Func_class: E Amino acid transport and metabolism # Function: Glutamine amidotransferase # Organism: Corynebacterium glutamicum # 7 204 5 211 211 196 50.0 4e-50 MSDPVRVGIIDHGSGNLHSARRALRQVGAEVIVSNDPSALLDTDALVLPGVGALAACMTG LRAMGGARLVRQWVDEGRPLLGICVGHQMLFERGRERDVDVKCLGVLPGVVEELPAERLP HIGWNTVIPAADSALFQGVQERFYFVHSYGVVVTGPHDHFTTATHQGATFVAAAEYGPVT STQFHPEKSGTAGLALLTRWLNQLS >gi|302034473|gb|GL383162.1| GENE 152 143665 - 144285 430 206 aa, chain - ## HITS:1 COG:ML1259 KEGG:ns NR:ns ## COG: ML1259 COG0131 # Protein_GI_number: 15827645 # Func_class: E Amino acid transport and metabolism # Function: Imidazoleglycerol-phosphate dehydratase # Organism: Mycobacterium leprae # 2 204 9 210 210 234 59.0 7e-62 MTHRRARVYRETSESTVDVAIDLDGAGESTISTGVGFYDHMLTALSKHSGIDMTITTSGD VEIDGHHSIEDTAIALGQALAQALGDKCGITRFGDAVVPLDEALAQCVVDVAGRPWVVCS GEPEGQAYARIGGSGVPYPGAMTYHVVQSLAFNAGLCVHLRLLAGRDPHHICEAEFKALA RALRIAIAPDPRNAGRVPSTKGALNV >gi|302034473|gb|GL383162.1| GENE 153 144282 - 145448 800 388 aa, chain - ## HITS:1 COG:Cgl2048 KEGG:ns NR:ns ## COG: Cgl2048 COG0079 # Protein_GI_number: 19553298 # Func_class: E Amino acid transport and metabolism # Function: Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase # Organism: Corynebacterium glutamicum # 21 376 4 362 366 342 50.0 7e-94 MTQHRQTSQPRPVAKPEPNSIQLADLPLRSELVGAQPYGAPQLDVPVRLNVNENPYPPSE AVRKDMAKAVAKAAKSLNRYPDREATGLREDLARYIGFGISSSQIWPANGSNEVMTHVLQ AFGGPGRSVLTFTPTYSMYPEYARNTHTNYVTRPRNASWGLTTDEILSAIEEVKPDVVLL TTPNNPTGTTIPVAVIDEVCAGTDTIVVVDEAYQEFTDAPEDSSIALLPKYGRLIVVRTL SKAFALAGGRLGYAVAAPAVVDALRMVRLPYHLSDVSQVVARVSLAHAPEMLARVDELRE TRVNLEDWLQLHGLDVVSSQSNFVLFGRFADRHAVFQALLDRGVLIREVGPTGYLRVCAG TPRQTDAFRTALLDVLPTAPRLVLEEDQ >gi|302034473|gb|GL383162.1| GENE 154 145445 - 146677 793 410 aa, chain - ## HITS:1 COG:Cgl2049 KEGG:ns NR:ns ## COG: Cgl2049 COG0141 # Protein_GI_number: 19553299 # Func_class: E Amino acid transport and metabolism # Function: Histidinol dehydrogenase # Organism: Corynebacterium glutamicum # 4 407 35 432 442 392 55.0 1e-109 MAAVIPVCSAVRDRGVEALREYSEKFDHVVPEHLRVPVEALATAAANLDGTLRRAFSESI RRRRHVCQEAEVEASSQPVEVAGGARVSQRIVPVGRVGLYVPGGFAPLASSVIMNVVPAQ EAGVSSIAVASPPQAEFGGLPHPSILALCHLLGVNEVYAVGGAQAIAMFAYGVEGSDEAD SCPRVDMVTGPGNIYVVAAKRCLRGTVGIDSEAGPTEIAILADKTADPRHIAADLMSQAE HDTLAAAVLVTDSTTLAEAVQRELAPMVSATLHSERIRTSLTSKQSAIVMVRDIDQGLEV VNAYAAEHLEIQTADAAAVAARVRNAGAIFVGPWAPVSLGDYSAGSTHVLPTAGAACHSS GLSVRSFMRAVHVIDYTEDALLELADSVEAFALAENLPGHANAITVRRSR >gi|302034473|gb|GL383162.1| GENE 155 146769 - 147314 423 181 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4212 NR:ns ## KEGG: HMPREF0675_4212 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 181 4 184 184 285 100.0 9e-76 MTRARMIAILRLSLLVIAMGIVLGGLAAPLWHSMVTLPTYTVGSDGAATTTEKGLTQVFS TDATYCLIGLVVGLIIGCLSWVLMRRRGAWGVLAAGISACLSALACWWVGVLIGPDSFAE RIASAKSGEVIPIDFALHTWVAVLVWLLAAMVPMLIASLLAARRGASRTGRAKTSTGASL D >gi|302034473|gb|GL383162.1| GENE 156 147320 - 150892 3485 1190 aa, chain - ## HITS:1 COG:MT1598 KEGG:ns NR:ns ## COG: MT1598 COG0587 # Protein_GI_number: 15841014 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit # Organism: Mycobacterium tuberculosis CDC1551 # 2 1185 6 1182 1184 1259 54.0 0 MARSDFVHLHTHTEYSMLDGAASNEKLFAEVARQGMPAVAMTDHGNMFGAYEFFQISKKY DGDQNPLIKPIIGIEAYVAPSTRKSRVQEFWGTSRDAGDPDAEGGKDVSGGGRYTHMTMW AKDSEGLHDLFRLSSLASYEGYYMKPRMDRELMGQYSGGIIASTGCPSGEVQTRLRLGQF EEACQAASDYRDIFGRENYFCELMDHGVPIEKQVRSDLLKLAKKLDIPLLVTNDSHYVTE DQADAHDSLLCVGVGRNKDDPNRFRFNGSGYYIKSSEQMRALFPDHPEACDNTLLLTEMI GSYDEVFKYVDRMPQFDVPEGETQESWLRKKLQEGLDEKFGPNPPKEVLERLETELSVIE PLGFSSYFLVVSDICNAARSMGVPVGPGRGSAAGSLVAYLTGIIAINPLEHGLLFERFLN PERVNPPDIDLDFDDRQRDKVIDYVTHKYGAEYTSQVNTFGKIKAKAAVKDANRILGYPF ALGDKITKAMPPDVMGKGVPLDKIFDSSHERYGEGQEFRQLVADNPDVAKVVETAKGLEG LIRGTGVHACAFILSSTPLLDLVPMHKRDKDGMIIAGFAYPQLEEMGLMKMDFLGLRNLG IMDHCIKIIKANRGIDVDLKNIALDDKTTYEMLARGDTLGVFQLDGTAMRSLLRLMGPTC FDDIVAVLALYRPGPMGANAHISYAQRKNNREPVIPIHPELKEDLDEILAPTYHLIVYQE QIMSIARKLAGYTLGGADLLRRAMGKKKKHILEENFIPFQAGMREHGYSDDAIQTLWDVM VPFAGYAFNKSHAAGYGLVSYWTAYLKANYPAEYGAALLTSVGDDKDKMAMYLADMRAQH INVLPPDVNASSLEFTAVGEDIRFGLGAIRNVGANAVAEIIRAREENGPAPDFFTFLDQV SLTVCNKRLIESLIKAGAFDSMGHSRRGLMAVYGQAVDAVIDIKRNQANGQDDLFGMGDD SQPTQMGVERVVPDDDWDRSTKLAFEREMLGLYVSDHPLRGLEAALEAESDISVAELVNP EGHHEGRYTVVGMVTQIVRRTTKNGDIWASVTLEDLDASITIACFPKVYQRVEPLLAVDS ILKVRGFVRERDETVEMSANDIWLLDLTDASKAPMTIDMRRGRCTRGTLEELRGVLRNHP GSSEVRLRLIDGKVTTTFRLADELKVTQGQPLMADLKALLGPSCVPRRQQ >gi|302034473|gb|GL383162.1| GENE 157 150954 - 151157 62 67 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313792017|gb|EFS40118.1| ## NR: gi|313792017|gb|EFS40118.1| hypothetical protein HMPREF9575_02002 [Propionibacterium acnes HL110PA1] hypothetical protein HMPREF9589_01018 [Propionibacterium acnes HL059PA1] hypothetical protein HMPREF9612_02350 [Propionibacterium acnes HL063PA2] hypothetical protein HMPREF9591_01961 [Propionibacterium acnes HL086PA1] hypothetical protein HMPREF9597_01301 [Propionibacterium acnes HL005PA4] hypothetical protein HMPREF9598_01382 [Propionibacterium acnes HL050PA1] hypothetical protein HMPREF9600_02039 [Propionibacterium acnes HL050PA3] hypothetical protein HMPREF9608_00900 [Propionibacterium acnes HL067PA1] hypothetical protein HMPREF9620_02297 [Propionibacterium acnes HL037PA1] hypothetical protein HMPREF9590_00876 [Propionibacterium acnes HL059PA2] hypothetical protein HMPREF9602_01800 [Propionibacterium acnes HL030PA2] hypothetical protein HMPREF9581_01986 [Propionibacterium acnes HL087PA3] hypothetical protein HMPREF9584_01693 [Propionibacterium acnes HL092PA1] hypothetical protein HMPREF9588_02162 [Propionibacterium acnes HL025PA2] # 1 67 1 67 67 128 100.0 2e-28 MGQSVDHLAQVSNDKSQHHGNGGAKKELASSRCPRDSFTHCLTHVVRQYLAFAPGVIRDV LGADYSV >gi|302034473|gb|GL383162.1| GENE 158 151857 - 152222 278 121 aa, chain - ## HITS:1 COG:CAC0383 KEGG:ns NR:ns ## COG: CAC0383 COG1447 # Protein_GI_number: 15893674 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIA # Organism: Clostridium acetobutylicum # 30 115 14 100 106 72 45.0 3e-13 MTSQCGSDSPDGGAVMSEIETAIFTIITSAGEARASLYQALDKARAGEMAESEQCMIEAD TQLKKAHDVQTELITRDLNGSLPMSLLLVHAQDQLMTTMSEQSLIEHMIGLIRDIGMNGG K >gi|302034473|gb|GL383162.1| GENE 159 152219 - 153487 798 422 aa, chain - ## HITS:1 COG:BS_ywbA KEGG:ns NR:ns ## COG: BS_ywbA COG1455 # Protein_GI_number: 16080890 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Bacillus subtilis # 1 421 1 439 444 266 37.0 4e-71 MEKFFNFLDRRVAGPMSMISEQRHIRAIRDGVISAIPFIIAGSLILIIAAPPVPETSGFA MWAKDHAEQILIPYRMTFGIMSLYVCFGVGSSLARSYDLSGLAGGQLGVAAFLLSLTPKT LGGGIYVALESLGSKGLFPVMILALLAVEVMRICYKHNLTFRMPEQVPESVSRSFGAVVP AFIIMGVMTLISVVFKIDFVDVVQQGLSPLVKAGDSLPGVLVPAFLVVFLWFFGISGDSV VGSVARPVWLQYLSDNADAVASGVPAPHIAPETFFQWFVSIGGSGATIGLVIAGFLVGRA RYTKSIMRAVAVPALFNISEPIMFGLPVMMNPFFIIPFLLAPLVLCVVTWFAFSWGFVTY MAVQPPWTLPAPIGAFLTTGGDWRAIVLCLVNILISTVIYYPFMRMYDRDQLKKERCEEG GA >gi|302034473|gb|GL383162.1| GENE 160 153493 - 153804 241 103 aa, chain - ## HITS:1 COG:BS_licB KEGG:ns NR:ns ## COG: BS_licB COG1440 # Protein_GI_number: 16080910 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIB # Organism: Bacillus subtilis # 3 103 2 99 102 62 33.0 2e-10 MSNVLLVCSGGMSSAIVLKDLEKEFQKLGEPLRAKAVGSGQAQDEISAGEWDLVLVAPQV RNRLKTFQQYADRHGIPICAIPPIAYGPLGGSELVKTVKEHLG >gi|302034473|gb|GL383162.1| GENE 161 153832 - 155262 831 476 aa, chain - ## HITS:1 COG:lin0017 KEGG:ns NR:ns ## COG: lin0017 COG2723 # Protein_GI_number: 16799096 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Listeria innocua # 2 475 8 472 477 362 39.0 1e-99 MKRILWGGATAASQYEGGFYDGKGMDTQDCRRWIPRLSNDTIQTRLLTEADIRNAKNSRS DDCRFPFRMGSRGYEYWESDLHYITSLGLDVYRLSISWARLFPTGFEDQPNPEGVMYYDR IIRTLAHAGIKVFITINHYAMPIAIVDKYGGWRHRDVIDLYLKMAKFVVDRWQENVDYWL PVNEINSGYFSPYNGLGIIGTIDYSYDYRSVFNGLHYQMIASALITKYGRDIGARGKFVC MVSCFDYYALHPTPEDNMKLVHDEQINQWWCADVLATGEYGYYTEKFLADHGVVLDITDK DRGILRSNTCDIVSFSYYSSSICSVDEKREQVPGNLVPTLRNPSLEATEWGWQIDPMGLR ITAHKVYDRYRKPIMVAENGLGARDNVDSDGRIHDNYRISYLERHMEQAELAVREGVDIE AYFVWGIIDIVSAGSCEMEKRYGVVYVDADNEGRGTYKRLPKDSFYWYRDFIASHR >gi|302034473|gb|GL383162.1| GENE 162 155259 - 156137 142 292 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4205 NR:ns ## KEGG: HMPREF0675_4205 # Name: not_defined # Def: Tat (twin-arginine translocation) pathway signal sequence # Organism: P.acnes_SK137 # Pathway: not_defined # 1 292 43 334 334 586 100.0 1e-166 MWQQCVERALQCFPTGGGYHTGRNIPPGFRQTAWTGLDRAVRVTATGVCVDPYLATPSFC SSATYLLLLKSLELYEKTCGVMPPRKEWEYLKPYTVDHRPYPIQNDGVGAWGRANANGPG MAELAHELKIGTNLYIGTTGEYANLADRNEMFASIRRYDFMKIFWNDEIGKDERGHMVVV LGRSSHSNRSRHRVGTVRYWSSNGSHTDINGGYGIKCVSEDKIHRAVVTRVDRPWNVWNT EVMGPTDVCAPLAEIAADRNMTPDELKQLVEAKSCWPRRFSGSQGAHGRYVR >gi|302034473|gb|GL383162.1| GENE 163 156266 - 157210 409 314 aa, chain - ## HITS:1 COG:SSO3218 KEGG:ns NR:ns ## COG: SSO3218 COG2971 # Protein_GI_number: 15899921 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted N-acetylglucosamine kinase # Organism: Sulfolobus solfataricus # 1 259 1 260 298 82 29.0 1e-15 MCFLGVDIGGTSVRSLVTDAGGKILGYQRIARVSHESLWQAINDCLGTVLAQSSVVHVEA AVVGAAGAGPTGNHDVCQSVEKAFRAVGLDVTPQVVTDIEIAYWSAAVLGDGSILVAGTG AIAGRFSEWRCVDRRDGAGWLLGDHGSGYWIGRKALRAAAADLDRRGPSTTITRGVVEAL GLPRGCTVQGLIGKTKELRPADVASFAQIVLSAQDDKIASIILADAASELVTTVKSVGAE HVILAGGLLAPNTSHNHQRPNTLRAMMEDSLGECPYASHPVVGACWAAGRLRGVELHKVD LMNALEVRSDSRRR >gi|302034473|gb|GL383162.1| GENE 164 157191 - 157634 315 147 aa, chain - ## HITS:1 COG:no KEGG:PPA1143 NR:ns ## KEGG: PPA1143 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 147 1 147 147 267 91.0 1e-70 MRSVYLTNESCGLVARQAASHSKVIFASLQVPETEYAKSFTLVALKRVGCRTSCPRPGAE ITSRWRVERPRLFTDRGLLVAFILAEMGLRAPLRRGLPNLEYERYGNAWIIVLHRTGAAV TLTEEELPNETRSCDDEKEQDYVFLGS >gi|302034473|gb|GL383162.1| GENE 165 157641 - 159158 1052 505 aa, chain - ## HITS:1 COG:BH3574_2 KEGG:ns NR:ns ## COG: BH3574_2 COG1263 # Protein_GI_number: 15616136 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Bacillus halodurans # 131 503 1 354 355 244 40.0 2e-64 MDYHLLAREILDLVGGPDNIASFTNCMTRLRLNLIRPETADAEAINGLAGVLGVVEGKEL QVVVGPGHAERLRSAFGEVMGSVDYTPATDTDATTQVTPPGTAKRGVDSAVVETEPSSVL EGDTDIAVRTKKMVRGTQTSRVQAMFRHIGNIFVPIIPGFIACGLVTAICGIWKTIDPTV ADDGWFLVLVGLGGIVIASLNFIVGHNTAQECGGSPVLGLIAGGVPYMPALAGTAATDKT AAIPLTIPIFGKLQPGLGGVIGVMITAWLFTVIERRLRKVVPAAIELFLVPAVTLLLGAA ASIFVIMPLSSLLMKGLTWLLVDFALAKGGIIGGFILATFFLPMVMLGIHQGLTPIHAQL IANHGFTELLPILAMAGAAQVGMAIAVLMKTRNPKLRSVIKSALPIGILGVGEPLIYGVS LPLLYPFLTACLGGGFGGAFIAWGTQNSGTFGSQAFGLSGLLMAPVISAGKWGWYLGGWL ISVIMGAVLTYLFGFKDSMAERIMD >gi|302034473|gb|GL383162.1| GENE 166 159178 - 160092 515 304 aa, chain - ## HITS:1 COG:BH3575 KEGG:ns NR:ns ## COG: BH3575 COG2103 # Protein_GI_number: 15616137 # Func_class: R General function prediction only # Function: Predicted sugar phosphate isomerase # Organism: Bacillus halodurans # 9 299 6 296 298 293 56.0 3e-79 MDSLTNLATTEGRNPASEELDQLPTLDVLRLMNDEDHRVPDAIASQLSAIAAVVEAAVKG LSAGGRLIYAGAGTSGRLGVLDAAECPPTFSTNPTMVVGLIAGGQQAMFQAVEGAEDDAD RGAEELNMLQPGPHDVVVGLAASGRTPWVLGVVRAAKRAGAVTASVCCNHRAVISSEVDL PVEIDAGPEVLTGSTRLKAGTAQKLVLNMISTATMVGLGKTYGNLMVDVSPSNEKLRQRA MSIVIAATGCSCDDAITALHEAGGHAKTAIVMVLLGMTATQARARLAEAGGVVRVAVDEN HLRL >gi|302034473|gb|GL383162.1| GENE 167 160218 - 161090 619 290 aa, chain + ## HITS:1 COG:PM1714 KEGG:ns NR:ns ## COG: PM1714 COG1737 # Protein_GI_number: 15603579 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Pasteurella multocida # 5 269 7 269 288 153 35.0 5e-37 MDDSLLPRIDMARTTMRPAEAQVAAVILAKPDWTLAASTSQLAEAAGVSPATVVRFCRAL GMSGYRELRTELARDLSRRTLELERSSVAEGTITLDDSLTQMITKIAFHEARTIENTARA VDADELEAVASAISIAPRTALFGVGSSGLVASDLSEKLERIGLVCQHHQDTHMQLVHAAL CKRPCVALGISFSGNTQEVVEALTVAQKHGSTTVAMTGLPDSPVGRLADHVLVTSARETQ VRAGAMSSRMAQLAVVDFLFARVAQLCMDDPETLLSSTRTAVSTHRKSLT >gi|302034473|gb|GL383162.1| GENE 168 161100 - 161747 652 215 aa, chain + ## HITS:1 COG:RSp0426 KEGG:ns NR:ns ## COG: RSp0426 COG3247 # Protein_GI_number: 17548647 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Ralstonia solanacearum # 13 186 8 181 186 59 26.0 5e-09 MSSQTLSKTWKSIWWIPFTKGILAIVAAVVALLWSRQTMTALVIIVGIYAIIDSVMTLVN AQALHGMAGTGFMKGWGIIGIIIGVILILHPGFSLHVIAIFMGVWLVLLGVFATSFALPL RLVTQKAWGWMFGGGISLFVLGIVILVHPGFGVVAMSWLLALGVLLYGVANLAIAVGIRK ITSSISLAMRRNPHNTIIEGDVVDSPDTSAHPELK >gi|302034473|gb|GL383162.1| GENE 169 161846 - 163993 1401 715 aa, chain - ## HITS:1 COG:ECs3301 KEGG:ns NR:ns ## COG: ECs3301 COG1680 # Protein_GI_number: 15832555 # Func_class: V Defense mechanisms # Function: Beta-lactamase class C and other penicillin binding proteins # Organism: Escherichia coli O157:H7 # 246 680 34 433 434 336 42.0 8e-92 MTAIVTAPLADRTLRAFGSDTRGLTIHLVGAPTTSRVEVRGLDGRIRRFSTRPEALSRVA IVSVPSRRFAVRMDSGRWRWLVRGDADQVWIMRDGDHEDPATYRTALPVPSEGVRVMSGR CWISVDWLARAAGWPLSRGAVPFDGLSSVPSDLLTVRRGGDVETFDTRRNLHARNFEEKF FHDEPNLMIQPVDGMVVGGQYWLTAGVVRRLWDVRLVRVGRQLIALERMHVGFDVLGTSR DVGALGFDQSKLARVGSWIDDQVKAGFSGTSVLVCRHGQIAWRHHAGQALKYSTEVIDHT VHKARLLPPAKQVPVTATTRFDIASNTKMYAVNLALQMLVGQGRIDLSRQVCTFPGWEAF RDESTVYTGSWTVGGPGGIKSPFTGKKTIRLVDLMHHRGGLVPDPQYPNATVAGELYLQN LDDISNRTDVIDRICRTPLMYAPHTERAYSDVDYMILGLIVEQVVGKRLDEYLQEGVYRR LGLERTGFRPLDIRTPPDLIAATELNGNTRDGNVGFGTRPDGSPVFIRTQTIRGQVQDEK AFYTMSGVSGHAGLFSTADDLGVLLQLMSNEGMYQGREYFPADVQRRFLTPDGDSATYGL GWRTNGYYYFHGGPSKAAFGHTGWTGTITMVDPIRDIQIVLLTNMRHSPVVEPPNEFAAG AFPLAHYVGLISRVYSALAEDGRVTDVDAPLLERAASSPTSSHRFRVVPRRRSSR >gi|302034473|gb|GL383162.1| GENE 170 164045 - 164323 190 92 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4198 NR:ns ## KEGG: HMPREF0675_4198 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 92 18 109 109 178 100.0 6e-44 MIRHAKALTWVCVALFVVLDVIGLTAPSQSDPRFVLGAFGGAASFLGIIGAGVWWASLAS QRRARVLDDRLDCELDIEDDARGNDRREPPAV >gi|302034473|gb|GL383162.1| GENE 171 164411 - 165883 970 490 aa, chain - ## HITS:1 COG:MT3973 KEGG:ns NR:ns ## COG: MT3973 COG0493 # Protein_GI_number: 15843490 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Mycobacterium tuberculosis CDC1551 # 1 484 1 483 488 516 57.0 1e-146 MADLHGFMNVTRQEAERRPVEERVQDWKEVYPGGPGHALLPIITDQASRCMDCGVPFCHT GCPLGNLIPDWNDLIWRDEWREALSCLQTTNNFPEFTGRLCPAPCETACVEGLNRAPVTI KNVEVAIIDKAWEDRRVIPVVPEWHSLKTAAVVGSGPAGLATAQQLTRAGHTVVVYERDD AIGGLLRYGIPDFKMEKSVLDRRIKQMALEGTVFKTNTEIGVDITGEQLRERFDAVVLAT GATVPRMLDAPGIGLDGVCYAMEYLTQQNRVVAGAEVLDQIRADGKHVVIIGGGDTANDC VGTAVRQGAASITQLQYNPEPPKDRSANYPWPTYPLILRVSSSNEEGGQRVYSTNTVEIV SNDRGHVKAVRVVSGHRDENRVFIADEGSEHDLPADLVIFAMGFAHPEYDGVVAELGLEL DGRGNIIRNDAYETNVPGVFACGDAGRGQSLVVWAIAEGRAAAHGVDAYLKGSPSVLPKP VKPSDRQMTV >gi|302034473|gb|GL383162.1| GENE 172 165876 - 170393 3311 1505 aa, chain - ## HITS:1 COG:MT3974_2 KEGG:ns NR:ns ## COG: MT3974_2 COG0069 # Protein_GI_number: 15843491 # Func_class: E Amino acid transport and metabolism # Function: Glutamate synthase domain 2 # Organism: Mycobacterium tuberculosis CDC1551 # 383 1186 1 813 815 1024 64.0 0 MIFGHHPRQGLYDPQFEHDACGVAFVATMTGVASHKIVEQGLEALRNLDHRGATGADPAA GDGAGILVQVPDAFLRRTTGIRLPEPGSYAVGLAFMPVDEAQRARARAAIELIAADEGIK VLGWREVPVHTHTLSEISLGTMPHFEHLLIRARDGRVGMDLEHLAFVLRRRAQHEAGVYF ASLSSRTLVYKGMLTTHQLEEVFPELHDTDLSSAVALVHSRFSTNTFPSWELAHPYRLIA HNGEINTVRGNRSWMQAREALLQSDLIPGDLARLYPICTPSGSDSASFDEVLELLHLGGR SLPHAVLMMIPEAWQENTEMSQELRDFYEFHSFLMEPWDGPACVIFTDGNQIGAVLDRNG LRPARYWVTDDGLVVFASESGVLDLPDAHVVEKGRLKPGRMFLVDLTEHRVVDDLDIKAR LASAKPYGEWLDQGRIDLDDLPERTHIIHSHASVTRRQQLFGYTSEELKMLVAPMANQGV EATGAMGTDTPLAVLSNRPRMLWDYFSQLFAQVTNPPLDAIREELVTSLTGTIGPEANLL EPGPESCRQVVVNYPIVDSDQLAKIIHIDADGEHPDRKTHVVRGLFVVEEGGEGLRRRIE EIRAEVSEAIAEGTTIIVLSDRHATRELAPIPSLLLTSAIHHHLVREKTRTRAGLVVEAG DVREVHHVALLMGYGASAVNPYLLFESAEDMARREVWVSTDPETAIHNVYKALGKGVLKT MSKMGVSTISSYTGAQIFEATGLSQELIDEYFTGTTSRIAGVGLTEIAQEILARHLSAYP ETGVRLAHRTLKPGGHYQWRREGEQHLVDPESIFRLQLAARTNDYEQFRRYTDHINDNST RLMTLRSLLEFRHARPAVPLAEVEPANEIVKRFSTGAMSYGSISIEAHQTLAIAMNRIGG KSNTGEGGEDPERLYDPERRSAIKQVASGRFGVTSEYLVNADDIQIKMAQGAKPGEGGQL PGSKVYPWVAKTRHSTPGVGLISPPPHHDIYSIEDLKQLIHDLKCVNPRARIHVKLVAET GVGTVAAGVSKAKADVVLISGHDGGTGAAPLTSIKHAGGPWELGLAEAQQTLLLNGLRDR IVVQCDGQLKTGRDVVVAALLGAEEFGFATTALIVEGCVMMRKCHTDTCPVGVATQNPEL REKFAGDPDHVVNFMMMMAEQTREILAELGFRSIDEAVGHVEALDTRKAITHWKARGLDL SPILHQVDLPHGSPLRHVRDQDHDLETSLDMKLIDMCTEALTNGTPVRQEVSIRNVDRTV GTMLGSRVTVATQGKGLPDNTIDLTFTGTAGQSFGAFVPRGMTMRLIGDANDYVGKGLSG GRVIVAPPLKTPFQPRDQIVAGNVVGYGATSGEILLCGQAGERFCVRNSGVTAVVEGVGD HGCEYMTGGEVLVLGAIGRNFAAGMSGGMAWVRNLDVSRLNADMVDALPMEQADVDRVTE LLELHQTETGSTLAGEILAQGAGGIRESFMKVLPRDYATMMKAMVDAEEHGLDENETTFM EVSHG >gi|302034473|gb|GL383162.1| GENE 173 170515 - 171354 475 279 aa, chain - ## HITS:1 COG:Cgl2037 KEGG:ns NR:ns ## COG: Cgl2037 COG0682 # Protein_GI_number: 19553287 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Prolipoprotein diacylglyceryltransferase # Organism: Corynebacterium glutamicum # 1 262 1 272 316 254 48.0 1e-67 MSQLSIPSPSIEAFHLGPLTIHIYALCILAGIVVAYISGGRRYQARGGKQEQFEELCALA VIAGIIGGRLYHVITDHQLYFGPGRTWYHCFFIWQGGLGIWGAISLGGLAIWLYCRRKGI RFASVADSLAPGILAAQAIGRLGNWFNQELFGRPTSLPWGLEIDLSHRPAGYLQYATFHP TFLYELVWSLVGAVFLLWVDRRWTLDHGRLFTLYVAIYTFGRFWVERLRIDPAHHVGQWR LNDVTALVVFTGAVVILIVLQRRYGKGDEHSSCPAHKTR >gi|302034473|gb|GL383162.1| GENE 174 171351 - 171848 177 165 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149916131|ref|ZP_01904653.1| 50S ribosomal protein L25/general stress protein Ctc [Roseobacter sp. AzwK-3b] # 1 143 1 141 263 72 33 3e-11 MTGSASVYLRAHQENRPALVGYFPVGHPSVPHSIDAMKALTTGTTGTGVDLVVIGMPYSD PMMDGTVIQHVTTGALERGVRTRDTLLATEAVAGTGTPCVIMTYWNLVEHYGVDAYARDL ASAGGSGLTTPDEAEDRGDSVTVGIDRMCAIVDDLAAGVRRAERQ >gi|302034473|gb|GL383162.1| GENE 175 171845 - 173101 845 418 aa, chain - ## HITS:1 COG:ML1272 KEGG:ns NR:ns ## COG: ML1272 COG0133 # Protein_GI_number: 15827654 # Func_class: E Amino acid transport and metabolism # Function: Tryptophan synthase beta chain # Organism: Mycobacterium leprae # 7 409 20 416 417 508 62.0 1e-144 MSARDLPDARGHFDRFGGRFVPEALQAALSQLTGTFEAAVTDPDFLTELEDLRREYAGRP SPLTEAPRFSQYIFQQTGHQVRVLLKREDLNHTGSHKINNVLGQALLTRKMGKRRLIAET GAGQHGVATATVAAMMGMECRIYMGQIDTERQALNVARMQLLGAEVIAVEAGSRTLKDAM NEAMRDWVAHVEDTHYLIGTASGPHPFPKLVREFQRVISAEARQQCLDRVGRLPDAICAC VGGGSNAIGSFAEFIDDPEVRLYGFEAGGDGVETGRHAASITRGSVGVLHGTRTYILQDP DGQTMESHSISAGLDYPGVGPEHSWLAARKRATYLPVNDREAMEALRTLTRTEGIMPAIE SAHAVAGVLKIAKDLPAHDGEPSVVIVTVSGRGDKDVDTALKWFAMDGSVDATTGGME >gi|302034473|gb|GL383162.1| GENE 176 173129 - 173929 504 266 aa, chain - ## HITS:1 COG:Rv1611 KEGG:ns NR:ns ## COG: Rv1611 COG0134 # Protein_GI_number: 15608749 # Func_class: E Amino acid transport and metabolism # Function: Indole-3-glycerol phosphate synthase # Organism: Mycobacterium tuberculosis H37Rv # 7 254 4 251 272 216 53.0 4e-56 MPPTVTGTVLDGIISGVLEDLHERQLMVTSDNLREATELVAPAIDPIPRLTAPGLSVISE IKRSSPSNGQLAAIHDPAALADQYRSGGAAAISVLTEERRFQGSLADLDAVRAKVEIPVL RKDFVVAEYQVLEARAHGADLILLIVAALSDDDLQRLYDLAIELGMTPLVEVHTPEEVSR ATALGARVVGVNARNLKTLEVDKTIFRELLGELPENVVKVAESGILCVDEAVEVYDLGAD AVLVGEMLVRHGEPAQVLRKIHRATV >gi|302034473|gb|GL383162.1| GENE 177 173930 - 174145 238 71 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4191 NR:ns ## KEGG: HMPREF0675_4191 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 71 1 71 71 85 100.0 5e-16 MSADRATRHYQYGGSPANWAGSIVALIGFIVATVGAMAGPSWTTCIMGAALVVLGGVVTL VMRAMGYGGAR >gi|302034473|gb|GL383162.1| GENE 178 174259 - 174897 226 212 aa, chain - ## HITS:1 COG:no KEGG:PPA1128 NR:ns ## KEGG: PPA1128 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 212 18 229 229 363 100.0 2e-99 MMTAVLVSVSSRRIWLERAGIGLTGADVTGGLMTATALMLIVTVAFLFVVRTIGRRVTGV LQALVGIGIVAIVVTHRTATAHQWAAQGVDAGAPQVHVSAWPWVCLVAGALTILSGIGLA VLADRWPSRSARRTGELTGDPRSVWDALDRGEDPTVGDVVEVPAEKVESALPLSHNEASC PGSSESTVDKSVHSDSSGSHNGQQTRIDGTSG >gi|302034473|gb|GL383162.1| GENE 179 174945 - 175262 232 105 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4189 NR:ns ## KEGG: HMPREF0675_4189 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 105 1 105 105 159 100.0 3e-38 MIDVASSREEFVARAVNHTVVPVRTALVSDDDTPVGAMTYSVARIRLRGRTVALKDRVRH VQAGAGSVLGLVGSRDNAECESKAVAVIQVVQSSGSLSALREDER >gi|302034473|gb|GL383162.1| GENE 180 175259 - 175636 242 125 aa, chain - ## HITS:1 COG:MT1641.1 KEGG:ns NR:ns ## COG: MT1641.1 COG0139 # Protein_GI_number: 15841059 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosyl-AMP cyclohydrolase # Organism: Mycobacterium tuberculosis CDC1551 # 10 119 2 111 115 155 76.0 1e-38 MRRVQTEEPTLAPAIAARLRRNDAGLVPAVVQDAATGDVLMMAWMDDVALARTLATRRAT YWSRSRQEYWVKGETSGHTQHVCSVRLDCDGDTLLLRVDQVDGACHTGDHTCFDADVLLA EEVES >gi|302034473|gb|GL383162.1| GENE 181 175725 - 176360 492 211 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4187 NR:ns ## KEGG: HMPREF0675_4187 # Name: not_defined # Def: conserved hypothetical protein TIGR03085 # Organism: P.acnes_SK137 # Pathway: not_defined # 1 211 1 211 211 397 100.0 1e-109 MSIAQDERAGLAADLSRLGPDAPTLCKGWTARDLLTHLLLRENDPLAVPGMAVNVFDAVT QARADRLEASGSFENLVARFAHGPGRFSVFRIPGLDSAANSMEYFIRHEDLLRAQPDWRP RELGHRTELRLADIIRKYGRALARRSPVGVRVEMTGQTDPVTLHPGDRIVTLVGKPSEVI LLLTGRTSVAQVDVLGEPATIAAFMRSDRSL >gi|302034473|gb|GL383162.1| GENE 182 176383 - 177876 1228 497 aa, chain - ## HITS:1 COG:MT3089 KEGG:ns NR:ns ## COG: MT3089 COG0064 # Protein_GI_number: 15842567 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) # Organism: Mycobacterium tuberculosis CDC1551 # 4 494 14 504 509 603 63.0 1e-172 MTDELLPYDEVMANYEPVVGLEVHVELSTATKMFCGCSTDTDKDPNTNVCPVCLGLPGSM PAINGHAVESAIRIGLALNCHIAQWCRMARKNYFYPDMTKNYQTSQYDEPICYDGWLDVE ADGETFRVEIERAHMEEDAGKSLHVGGSDGRISGASHSLMDYNRAGVPLIEIVTKPIRGL GAKAPQVARAYMAQLRDIMIALGVSEARMERGNLRCDANVSLMPRGSETLGTRTETKNVN SLRSVEGALRYEIQRQGYLLSEGRKVRQQTRMWQEAGEYTIAGRDKSDAEDYRYFPEPDL VPIAPSREWVEQLRAELPELPAAKKARLSSQWQFSEADMTSAVNAGALDLLEATVDAGCQ PAAARKWWLTELSRRANEAGVDLAEVGMTPCQVAQLQKLVDDGTLTDKLARQVIDGVIAG EGDPQQVVDGRGLAVVSDDAALGSAVDDVIAANPQIAEKIRGGKVQAAGALIGQIMKVMK GQADAKRVRELILEKLS >gi|302034473|gb|GL383162.1| GENE 183 177873 - 179378 438 501 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163737840|ref|ZP_02145257.1| 30S ribosomal protein S4 [Phaeobacter gallaeciensis BS107] # 1 483 1 456 468 173 30 2e-41 MNELLTLTAAELGERIAARQISSEEVTQAHLDRISEVDGDIHAFLLVDHAGALDAARRID ARIADGEHLGPLAGVPLAVKDLFCTKGIATTASSQMLEGWIPPYDSTIVTRCKDAGMVIL GKTNLDEFAMGSSTETSAFGPTHNPWDLERVPGGSGGGSAASLASFQAPLALGTDTGGSI RQPGAVTGTVGIKPTYGSTSRYGVIAMASSLDTPGPCARTVLDAALLHQAIAGHDAMDQT TINQPTPAVVEAARQTDVSGVRIGVVTELSGQGYDPQVEARFHEAVEMLIEAGAEVVEVS CPNFDLALPAYYLIQPAEVSSNLARYDAMRYGLRVNDDGEHSAEQVMRATRGAGLGAEAK RRIILGTYALSAGYYDAYYGSAQKVRTLIQRDFEKAWQMCDVLVSPATPTTAFRLGERTA DPMAMYRSDLCTVPANMAGSPAGSFPIGLSETDGMPVGMQVMAPIMADDRIYRVGAALER LLHEKWGAPLLAKAPEVRGER >gi|302034473|gb|GL383162.1| GENE 184 179375 - 179698 291 107 aa, chain - ## HITS:1 COG:MA4522 KEGG:ns NR:ns ## COG: MA4522 COG0721 # Protein_GI_number: 20093307 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit # Organism: Methanosarcina acetivorans str.C2A # 11 101 2 92 93 69 37.0 1e-12 MPSTRRFIVALTPDDVVRLAGLARIDLTDDETAYLAPQLDAILDAVAAVSGVATDDVPPT SHALLLSNVFREDVIKESMSSHDALAMAPRSENQRFRVPRILDEEAQ >gi|302034473|gb|GL383162.1| GENE 185 179840 - 180451 546 203 aa, chain + ## HITS:1 COG:no KEGG:PPA1121 NR:ns ## KEGG: PPA1121 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 203 47 249 249 400 100.0 1e-110 MIRIQLPDTPGSLGSVATAMGTANADISAIEIVEKGPDYVIDDFILTLPPTTMPDTLVSA CGMLDEVHVLWLSRYPENWSIESDIAALNRMSEDPEHSAEILCGAVPVVFHTQWAALFDV DEQVIISTALAPEFTAEGIARLAPMDRTHTAELEADWMPGWGDTIIAVVPLSQGRCLVVG RQGGPGFLASELNRLQHMAALAN >gi|302034473|gb|GL383162.1| GENE 186 180458 - 180970 511 170 aa, chain + ## HITS:1 COG:no KEGG:PPA1120 NR:ns ## KEGG: PPA1120 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 170 1 170 170 306 100.0 2e-82 MEVYLTWQFWYQVLSAFAFGVASSLVPVLNSELFIVGALGSRLLGPLEVALGLALGHGVG KQVMFVGIRKGSNSRWIKHKEPKPVAVGSWRWRLRRWNDQAAHIVETPRWGMPLLFFSAI TGIPPVYLVVIYAATTKMNFWWFSLWVTLGFFIRCYLLALATQYGFHFII >gi|302034473|gb|GL383162.1| GENE 187 180996 - 181208 253 70 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4181 NR:ns ## KEGG: HMPREF0675_4181 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 70 1 70 70 127 100.0 2e-28 MGFFTNLNLDGQTPVRTRPRVGEEQWAPAAVPTTKRKKAQRVLAPIAFSVALAVLVGVGY YFFRIIVVGG >gi|302034473|gb|GL383162.1| GENE 188 181219 - 182205 414 328 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4180 NR:ns ## KEGG: HMPREF0675_4180 # Name: not_defined # Def: methionine synthase, vitamin-B12 independent (EC:2.1.1.14) # Organism: P.acnes_SK137 # Pathway: not_defined # 1 328 1 328 328 605 100.0 1e-172 MIATGIGSLPGTDMRGSLAAMAETFDQLIPLPELPARGVGAHMIGRATAVLVDLPVDHGP GGWRLADSTDHAARSARSWLRSDLDDLEEVLADKEASVKLSFAGPLTLATGLHLRAGESI LADGSALADVTTSLAEGVSQLIAELRRRMPRVTWTLQIDEPSAPAVLSGAVPTQSGLYRY PAMAGSTAVQLWQTVVSGCGEAEVGMHCCGAPIPWVLARKAGFSTMWCEVASLLNLDRVA GWVESGARLGMGVVDTMQVDKVPLVDRLIDRVLWLVRRLEIDPAVLKSGILSPACGLAGW SRHDAAEVCRTVKRAGDLVDEQLDQASR >gi|302034473|gb|GL383162.1| GENE 189 182202 - 183302 756 366 aa, chain - ## HITS:1 COG:Cgl1211 KEGG:ns NR:ns ## COG: Cgl1211 COG0482 # Protein_GI_number: 19552461 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain # Organism: Corynebacterium glutamicum # 1 356 1 364 365 369 57.0 1e-102 MKVLAAMSGGVDSAVAAARLVEAGHDVTGVHLALSRNPRSHREGSRGCCSLEDSFDARRA ADRLGIPFYVWDFSDRFVAEVIDPFIAEYRAGRTPNPCLRCNERIKFAALLERGLDLGYD AVATGHYARTKVVDGVTKLYRSVDPGKDQSYVLAVLNQDQLSHSLFPLGNSLKMNVRQEA AALGLSVADKPDSNDICFIPDGDTPGWLSEKIGSADGEIRDESGALVGHHNGYHHFTIGQ RRGLRLGVPAPDGKPRYVLDIEPVNNTVVVGGAEGLTVHHIEAIRPVWCSSEPVETWHGQ AQVRAHGDPVPAIISAVPGGVAVELEDSLRGVAPGQAAVFYDGDLVVGSATICGTDRAGV KAEQAA >gi|302034473|gb|GL383162.1| GENE 190 183392 - 184531 554 379 aa, chain - ## HITS:1 COG:alr3088 KEGG:ns NR:ns ## COG: alr3088 COG1104 # Protein_GI_number: 17230580 # Func_class: E Amino acid transport and metabolism # Function: Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes # Organism: Nostoc sp. PCC 7120 # 15 374 4 379 387 219 37.0 1e-56 MSQLKPGSVHHDRAYFDHAATSPLRREAREAMACTVPGNPGAIHGSGRAARALLEDAREE IASLLGVGPLEIVFTSGGTESDMLAVMGAVRDGHALVSAVEHPAVGGLVSPWLLGKRCEL LPVNHAGLVDPDEVGGHSGNLDVVSVMAVNNETGACQPVSRVAEAAHQAGALMHTDAVQA LGHIPVDLDGWGVDLASFSAHKIGGPVGIGALWVKRGVELHPVSPGGGQQYGMRSGTQPV ALACGFAAALRACVDEFDTMTARWQSWRRRVIAWCRQQPEVTVDDAPMTSPSIIHLSVAG ARGTDLVMLADRDGIDLSAGSACHAGVSRPSPTMLAMGRDDDAASSGLRISMGYTTTDVD IDRLLVTLPATIRKASGAR >gi|302034473|gb|GL383162.1| GENE 191 184688 - 186808 1381 706 aa, chain + ## HITS:1 COG:Cgl2054 KEGG:ns NR:ns ## COG: Cgl2054 COG1523 # Protein_GI_number: 19553304 # Func_class: G Carbohydrate transport and metabolism # Function: Type II secretory pathway, pullulanase PulA and related glycosidases # Organism: Corynebacterium glutamicum # 8 688 13 712 836 596 44.0 1e-170 MTDTNTAPFDTSALGSTLIDGGCRFGLWAPRAERVELALVADDGSQVNHDMTRDEHGVWT VEVSDVQAGQRYGYRVHGPWDPDRGMRFNPAKLLLDPYARAITAGVDYHGPIMDHTPESN YEPDLTDDATSVPLAVVIDDPGPPTPIARRHDISESVIYETHVKGYTRLHPLVPEHLRGT YAGLAYPAVIEHLKSIGVTAIELLPVQQFVSEPFIVGRGLSNYWGYNTLGFFAPHAAYCS VGSMGTQVREFKDMVTSFHEAGIEVFLDVVYNHTGEGGHEGPTLSFRGIDHESYYRLTND HRNDYDVTGCGNSVDTSHPEVLAMVLDSLRYWVTEMGVDGFRYDLATTLIRDKSHGVDQN HLFKQALVEDPILNKVKHIAEPWDLGPYGYQVGAWGPHWSEWNDRFRNYVRDFWRGAVRG VEELATRLCGSPDLYGQPTSSVNFITAHDGFTMRDLVTYNMKHNQGNGEDNHDGSNDNRA WNCGWEGETTDQSIVMLRHRQVRNLVATLLLATGVPMITAGDEMGRTQQGNNNAYCQDSP ISWIDWEDAEAWSDVTDLVKIITALRREHPALRPSRYRHHDPVGDANDSYPRRADLAWFS GHGGEMVNNDWHDESRRTLGMYTSDDNEAFLIWFHAGDRPIEIILPSVRWGESWHVVAST ALPGEIPDEAVPAGLSVTLPSRCVVVMQASPFGLTAPLRAKRTLGG >gi|302034473|gb|GL383162.1| GENE 192 187060 - 189186 1786 708 aa, chain + ## HITS:1 COG:Cgl1197 KEGG:ns NR:ns ## COG: Cgl1197 COG0366 # Protein_GI_number: 19552447 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Corynebacterium glutamicum # 60 701 3 652 675 549 47.0 1e-156 MAPASPADSPKSAPAPEPSPVPPEFPAPRRAAEHAFGNNALFTATSAIDSPGYPPLRGFG RIPVHNVRPEVESGHLPIYSVVNEEFEVTANVFREGHDAVGASVVLTDPEGNRHLTDMHQ VEPWGLDIWKARVSADIEGDWAMHVEGWSDTWGTWHHNANAKLAAAIDVELVCAEGHALI NEAVRHAEQSGDTDAITALRETDANLTLDRAPDSLQQVINTYAFCEAMRVHAPRLLTSPT LPAPLRVERRRALYGSWYEFFPRSQGAYVDADGHWVSGTFDTSWERLDAAAAMGFDVVYL PPIHPIGTAFRKGKDNTLTPGPDDPGSPWAIGSSDGGHDTIHPDLGTFDDLDRFVAHAHD LGMEVALDFALQASPDHPWVHQHPEWFTTRVDGTIAYAENPPKKYQDIYPINFDNDPDGI YQECLRLLELWISHGVTIFRVDNPHTKPLNFWAWLMEQVHRRHPEVIFLAEAFTRPEMMA ALGKVGFQQGYSYFTWRTTKWELEAYLDEVSHQTSHFYRPNFFVNTPDINPIYLNDGNPA GFAIRAILAATMSPSWGMYSGFEICEHEPLPGREEYAHSEKYEYRPRDYDSEPNITLLVT RLNEIRRAHPALQQLRDTTIHHAPHDNVFVFSKKAGNDVVIVVTSLDPVWGVESQIMLDM AALGFDNDDTFTVHDELTGADFTWGQQAFVRLYPAQPAHILHVRKTTS >gi|302034473|gb|GL383162.1| GENE 193 189183 - 190955 1218 590 aa, chain + ## HITS:1 COG:MT0134 KEGG:ns NR:ns ## COG: MT0134 COG0366 # Protein_GI_number: 15839507 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Mycobacterium tuberculosis CDC1551 # 49 588 43 588 601 678 60.0 0 MTHVPCTPAAEIPETLAPTGALGLTSAQLQARLDEIHPVGSIDRTETEWFRTAVFYEVLV RSFKDSNGDGIGDFKGLTGKLDYLQWLGVDCLWLPPFYDSPLHDGGYDIRDYRWIREELG TIEDFKVFLDAAHDRGLRVIIDFVMNHTSDSHPWFQSSRADPDGPYGNYYVWSDTDEAYS DARIIFCDTEDSNWSWDSQRKQFYWHRFFHHQPDLNFEEPRVMEEMLDAVRFWMDLGIDG FRLDAVPYLIEAEGTNCENLPGTHKILKQLRAMVDEEYPGRILLCEANQWPDDVVEYFGN GDECQMAFHFPVMPRLYMGLRRGSRECISEILAHTPHIPDGCQWGTFLRNHDELTLEMVT EEDRHYMWEEYAPESRWRCNLGIRRRLSPLVDNDDAKIRLLNAMLLSLPGSPVLYYGDEI GMGDDPWLPDRDGVRTPMQWDDSETAGFSTALPEDFHLPLIRTFGHDPEHVNVARQMDDP SSLLVWTRAMLGIRRHHPVFGTGEFTDLGGPDMAVMSFLRHNEHETVLCLANFSDTERMV ALHLPQFAGVTGSSLIHGQDAQPVKADGTLSVPLWPYGYRWLQMSREERS >gi|302034473|gb|GL383162.1| GENE 194 190952 - 192250 648 432 aa, chain + ## HITS:1 COG:Cgl2251 KEGG:ns NR:ns ## COG: Cgl2251 COG3281 # Protein_GI_number: 19553501 # Func_class: G Carbohydrate transport and metabolism # Function: Uncharacterized protein, probably involved in trehalose biosynthesis # Organism: Corynebacterium glutamicum # 132 429 79 361 363 180 37.0 5e-45 MTVWDDATVRERVWDHISGARWFSGKGRCGSLTRLLPLAPVVNEQDLQVLPVIAHVGYPQ AADEYYQLLLALRPGRVAGLAEIVVNGQPFTVTDATEDELALTAWARILLEGTPIAMDGS WQLHRRRAAPEPVRFVKRFGGEQSNTSFMVGDAIIIKMFRRLEPGDNLDITVHNALNDAG ISSVATLYGFMSGQIPAEEHIPVDLAMIIERLPQPRDGWELITAKAVDLVDVTDLVAGLG QCLRTIHEALRHTFSTVEIDGSRVADDMVRRLDAAVVTAPALARYRGTLTARFEKLRGRH LAAQRIHGDFHLGQTLLTPGGWRIIDFEGEPLKPLAERRLPDSRWSDVAGMMRSLSYATS AHARPTAPQTLTWARRASEAFLTGYGWPNTAEQDLLAAYEADKASYEIVYETLNRPTWVD IPLSAIRAMGQD >gi|302034473|gb|GL383162.1| GENE 195 192329 - 194263 1774 644 aa, chain + ## HITS:1 COG:Rv1326c KEGG:ns NR:ns ## COG: Rv1326c COG0296 # Protein_GI_number: 15608466 # Func_class: G Carbohydrate transport and metabolism # Function: 1,4-alpha-glucan branching enzyme # Organism: Mycobacterium tuberculosis H37Rv # 13 627 114 728 731 671 54.0 0 MAHDEFGGLTGWDLEGFHSGGDTEVWKRLGSHVVTIDDDERGPITGTRFAVWAPNAQAVE VISDFNWWTGDRMRLIPGSGVWGTFVEGVDEGTLYKFRIQDQWGTWHEKVDPMARYSEQA PQNASIVNETHYEWNDDEWIARREASRAHAEPMSVYEVHLGGWRHGLSYRELADQLVSYV TWQGYTHVEFMPLAEHPFAPSWGYQVTGYFSPTSRYGSPDDLRYLIDKLHQAGIGVIMDW VPGHFPKDDWALGRFDGTALYEHADPRQGEHKDWGTYIFNYGRNEVKSFLVSSALYWISE FHADGLRVDAVASMLYLDYSREEGQWVPNKYGGRENLEAIDFLRYVNSHLYSRHPGILMI AEESTSFPGVTKPVDDGGLGFGFKWNMGWMNDSLRYLELNPFHRQYHHGEMTFAMVYQYS ENFILPISHDEVVHGKGSMITKIPGDDWQQFASLRAFYSYMWSFPGKQLVFMGQEFGQRH EFDESVSLEWFVADLWGHGGLKRLFRDLNKIYKENPALWQLDSDPRGFEWINADDAGNNL FSWLRRSDDGSTIACFTNFSPNPQTDYRIDLPMEGVWTEILNTDSLEYDGTGEFGNLGQI VAAPLPAPDRLRAVATVCVPPMGSVWLRHNPSATAALPGDPGVQ >gi|302034473|gb|GL383162.1| GENE 196 194287 - 195081 422 264 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227379795|ref|ZP_03863252.1| acetyltransferase, ribosomal protein N-acetylase [Kribbella flavida DSM 17836] # 37 252 110 325 338 167 44 1e-39 MVDDESGSEDFRIQVEVVDDSGRLLLDDPPYPEGLTRAISLASDDAIIGHDVRRLEARVA VDDDEVIHALHHAGYRREGRLRQARVRENGWIDEYIYSRLATDEIYTRTGHTGMLDSVLP TKRVISHVLLRDDAGRVLMCETTYKPDWELPGGVVEPIESPHAGAVRECREELGTPLDIP GTPSLIDWMPPALGWSDAIEFIYDAGVAEPSLVKVMHPADSEISRLHWVEPQLIPDHVTA LSARRIEAILSDCMPRATENGFPV >gi|302034473|gb|GL383162.1| GENE 197 195351 - 197396 1990 681 aa, chain + ## HITS:1 COG:Cgl1324_2 KEGG:ns NR:ns ## COG: Cgl1324_2 COG1263 # Protein_GI_number: 19552574 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Corynebacterium glutamicum # 117 505 1 375 415 356 50.0 7e-98 MSSPASQIVDAVGGPDNIVGLTHCATRLRFQLRDSSPIDKAEVEAIPSVMGAVPQSGNRY QIVIGGAVAGVYNDIMALPAMKGLSSSSGNQSDADVKAEHRSKGPRGKFSWLDNLFEYLS DSFRPIMGALLGASLFITFMALMGSLGVIGNWADSRVTLPPSWQFVNLAWQCVFYFLPLL VAYNATKRLNADPWVGFSVMAVVMLPAFTELGKTAHPLTLGGFKVNVVDVFGLPLTIFNY GSQVFPPLIMAAILAPLYKWLKKIISPNVQMIFVPFLTMLIMIPLTAFLIGPIGVYAGAG LANGLKAVNDVSPFIFAVLIPLLYPFMVPLGLHWPLNAVMLLNIQTLGYDYIQGPMGAWN FACFGATAGVLFLSVRDKDVTMRQTAIGALAAGLLGGISEPSLYGIHLRYKKIYPSMLVG CLVGGVIIGAGGGLHTPAFVFTSLLTIPAFDKIGLYSVAIAASFFTAMALVIVRDYRDND EKAAAKARRRQASAHEAEPTAAAPAAATESITETATVEGAEAPTAAEVAAEAVTVTSPLE GRAVPISEIPDPVFSTGVVGDGIAIEPTSNTVVCPADATVVTAPDSGHAFGLKLDSGVEL LIHVGIDTVELGGKGFDVKVKAGDHVSAGQPLVVFDPTVIDEAGYSKITPVLVTNGFDYS NVTGIPADDVTTGTPVITVVK >gi|302034473|gb|GL383162.1| GENE 198 197496 - 199979 1740 827 aa, chain - ## HITS:1 COG:MT3509 KEGG:ns NR:ns ## COG: MT3509 COG1554 # Protein_GI_number: 15842995 # Func_class: G Carbohydrate transport and metabolism # Function: Trehalose and maltose hydrolases (possible phosphorylases) # Organism: Mycobacterium tuberculosis CDC1551 # 6 765 7 742 786 501 39.0 1e-141 MDRWRFPDDPWAIVETAPSTDDLGTTETLFSIGNGYLGMRGNPSEGRDSFSHGTYINGFH EIWDIHHAENAYGFARTGQTIVNVPDAKLMKLYVDDEPLLLSINEIQSYKRWIDFREGVL RRELVWRTPAGKLLRVATSRMVSFTHRHMALISIEVTMLEGDAPIVISSQILNRQDGMDE YHARPDDIEKTADPRQARKFADKVLIPEKDWHSDRRMILGFRTARSGMTLAVGADHEIIT ENEYAALIDTEPGMGKRVYRVEATQGRPIRIDKAVAYHTSRGVPVHELFDRVRRSLDRVR EQGHNVYYDEQRAWLDDYWATADVEVEGAPTGIQQAVRWNLFQIAQASARADQLGIPVKG VTGSGYEGHYFWDTEVYVIPMLTYTHPRIAENALRFRVNTLPQARRRAKELSERGALFPW RTITGEEASAYYAAGTAQYHINADIVHAIMNHARATEDKTFLFRDAAPVLVETARMWADL GFWRINGGREFHIHGVTGPDEYTTVVNNNLYTNVMARANLIDAAGVIRRMRDEDPLWYEH LCSELDLTEDEVGGWEECAAGMVIPFDDTFGIHPQDDQFLSRELWDLKNTPDNKRPLLLH YHPLVIYRFQVLKQADVVLALFLQGDQFTQAVKLADFEYYDPITTGDSSLSAVVQSVMAA EVGHQEMAMGYFLDALFCDLADTHHNASDGVHVASTGGVWGCLVHGFVGMRNDRENLRFD PRLPAQWTSIKHHMLIGDSHMLVFLERDAITFQILSGHDRDVTVRGELYHIGVEPVRVPL SDQGPLRPSLRVTHPISGLRRADGSLITAEVPGSIAETIVSSPISTS >gi|302034473|gb|GL383162.1| GENE 199 200000 - 200734 487 244 aa, chain - ## HITS:1 COG:ML0393 KEGG:ns NR:ns ## COG: ML0393 COG0637 # Protein_GI_number: 15827118 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Mycobacterium leprae # 6 240 18 261 261 205 49.0 6e-53 MDSPSLDEKFHAVLFDLDGVLTPTALIHMRAWQEMFNEELSRHQDQNPYTDEDYFAYVDG KPRYNGVRDFFASRGITLPEGDPSDGPAAQTICGLGNRKNDLFNTVLARDGIQPYPGSRR WVDRLHESGMAMAVVSSSRNAAAVLKAAGMVEDFSVLVDGNRSKTERLPGKPAPDTYLRG AELLGVPAEQCVVVEDAVSGVRAGAAGGFGMVLGVNRGVGADRLREAGADRVVDDLDEMV EEMA >gi|302034473|gb|GL383162.1| GENE 200 200651 - 200881 118 76 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|315092794|gb|EFT64770.1| ## NR: gi|315092794|gb|EFT64770.1| hypothetical protein HMPREF9582_01219 [Propionibacterium acnes HL060PA1] # 36 75 6 45 46 69 87.0 9e-11 MNERGGSQNAIEVEQHSMELLIEGGRVHNPHAIHHVGKGHLDSISRRLLAISPASNGGHD SASLWAEIRGFLKRVI >gi|302034473|gb|GL383162.1| GENE 201 200939 - 201880 797 313 aa, chain - ## HITS:1 COG:ML1159 KEGG:ns NR:ns ## COG: ML1159 COG3118 # Protein_GI_number: 15827586 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Thioredoxin domain-containing protein # Organism: Mycobacterium leprae # 14 313 4 301 301 112 32.0 1e-24 MDDMSSDSIHRHDAVDLSGLAAAASSADSPVGPAAHVGSATARTWVVEGTEENFNSLLQK SVQHPVLVEFTTPQAHGAKEMESLLRRVTDEAAGKWLLVRVDIDAQPRLAQSLGVKAVPM LVAVIGGQLAPLAQGTIDEQQFRQLTEQVIQAATSAGMVGRAEPVMVEVSSEEPVGPDPR TVEAEKLMDAGKFDEAVAAYDALLASEPNDPVLIAGRNGAALLGRLDGKDPAALLTAAQQ RPDDVDAQLAAADVELMGGRPADAFNRIIQVVRSTHDEERETARTRLLDLFEMVGQSAPE VAAARRSLAAVLF >gi|302034473|gb|GL383162.1| GENE 202 202004 - 203635 1443 543 aa, chain + ## HITS:1 COG:Cgl2489 KEGG:ns NR:ns ## COG: Cgl2489 COG0033 # Protein_GI_number: 19553739 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglucomutase # Organism: Corynebacterium glutamicum # 1 541 1 552 554 702 67.0 0 MAHERAGKPAQESDLIDVDAVLSAYHDISPDPSNPDQMVVFGTSGHRGSSLDGAFNDAHI AATTQAIVEYRTCQGIDGPLFIGKDTHALSMPAWTTAIEVLCANDVEVIAEHDDEWTPTP AVSRAIIVHNRLSEGRQADGIVVTPSHNPPRDGGFKYNPPHGGPADTDATGWIADRANEL LADPSGIRRKPYEQVRNEVSRYDYRSAYCDDLRNAIDLDAIDEAGVHIGADPLGGASVQY WEYIADHLGIDLTVVNPTVDPTWRFMTLDSDGKIRMDCSSPSAMASLIANKDAYDIATGN DADSDRHGIVTPDAGLMNPNAYLAVAIGYLFAHRPGWRPDAGIGKTLVSSSLIDKVAADL GRRLIEVPVGFKWFVPGLMRGDIGFGGEESAGASFLDLDGQTWTTDKDGILLALLASEIK AVTGRSPSEHYADLEDRFGKSYYARIDADANREQKARLKALSPDDVSANTIAGEKIEKIL TKAPGNGAAIGGIKVMTENAWFAARPSGTEDKYKIYAESLRDADHLAAVQEEARHIVDQA LKG >gi|302034473|gb|GL383162.1| GENE 203 204113 - 204406 139 97 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSLVLLTEEHPEAQHVAVVLDGLVHVLDGKTDVINTRKRIVVEVLHGPIVALSTRVQPGG VGIPGALCTGVLQAMERCGLCAQWFAQLAAGQIMPTR >gi|302034473|gb|GL383162.1| GENE 204 204269 - 204727 607 152 aa, chain + ## HITS:1 COG:Cgl1189 KEGG:ns NR:ns ## COG: Cgl1189 COG0346 # Protein_GI_number: 19552439 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Corynebacterium glutamicum # 3 143 8 149 151 120 42.0 1e-27 MENFNNDPFACIDHVGFAVKDMDEAIKYHCDVLGFRVLFREKNEGHGVEEAMLGTGKRGE ESTVVQLLAPLSEDSTIGKYISKNKNMIQQVCYRTYNLDKTIATLKERGAVFTGEPSIGT AGSRVIFLHPKYTGGLLIEITEPPAGGMPYKD >gi|302034473|gb|GL383162.1| GENE 205 204861 - 206198 1433 445 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4165 NR:ns ## KEGG: HMPREF0675_4165 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 445 1 445 445 525 100.0 1e-147 MSTKDVSDGQFDEETGLNLFDDTASAAGSFTHSMWGYDRTSVDNYVREIEQQVSTLKQLT RHLRGQVSQAQAEATQSDFKRLGVHATEILTAAEAQAKDIVAMAGREAERIKEEGRRVAA DMRAAAQTESDDIRVAGLANQRELRDQAAKDSRTAIEQARLQARTIVEQAGTHAEAIVTE ARTKAATIDQNTRAQVAQILDQARSEAATITTKARQEAENITNEARTSHDEATAKIKQLL EQATVHQQASSDNVTKRTQEADAIRQSALEEAETTRNQAARDAENRIATAHRQAAMMKER LEEQYAWRKEQLERETAALLQRKKAVIAQLNNLKALAGEAESDYPDTDPFAEEAEGATAD DATIVISPKSSQAQQKPAASQNTQADQSMADDKETAPLNDPASQRTQVIPAVKDGESAQP SGATAADEADNEKTQVLPQGIRPGK >gi|302034473|gb|GL383162.1| GENE 206 206261 - 206968 688 235 aa, chain - ## HITS:1 COG:MT1363 KEGG:ns NR:ns ## COG: MT1363 COG1637 # Protein_GI_number: 15840774 # Func_class: L Replication, recombination and repair # Function: Predicted nuclease of the RecB family # Organism: Mycobacterium tuberculosis CDC1551 # 1 235 4 226 226 290 65.0 1e-78 MRLVIAQCQVDYTGRLTAHLPWAKRLIVVKSDNSVSVHADDRAYKPLNWMSSPCTLTIRP CLPDEPAATAAVDAEEVWEVDAPTGDHLQILLGPKVLDVTEELGIDPGLQKDGVEAHLQE LLAENPNTFGDGWSLVRREYMTPIGPVDLLCRDADGVYVAVEVKRRGEMDGVEQLTRYLE LLNRDHLLGDRVRGVFAAQKIKPQARTLAVDRGIECVTIDYDALRGMDHPEDRLF >gi|302034473|gb|GL383162.1| GENE 207 207001 - 207252 158 83 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|314955732|gb|EFT00134.1| ## NR: gi|314955732|gb|EFT00134.1| hypothetical protein HMPREF9609_01308 [Propionibacterium acnes HL027PA1] hypothetical protein HMPREF9581_02037 [Propionibacterium acnes HL087PA3] # 1 83 24 106 106 154 100.0 3e-36 MWGSWLDWMQTPRTGINLERSAGGHRAHDVLTISLVLRARVTSGIEGSGRALPFARTMMT THGSHCAPRGGRENNAERRTLCQ >gi|302034473|gb|GL383162.1| GENE 208 207345 - 208163 526 272 aa, chain + ## HITS:1 COG:ECs0717 KEGG:ns NR:ns ## COG: ECs0717 COG0596 # Protein_GI_number: 15829971 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Escherichia coli O157:H7 # 20 263 23 253 254 116 31.0 4e-26 MNKLHLTTLGNGQQDVYWCHGVFGQGKNFTRVAKDLLATDPDAYRCILVDLPNHGRSPWT QTFSYRDMADSLAATVKATSGNRPAHLLGHSMGGKVVMRTVLDNPDLARSLTVVDMAPVD SRLTRLAPLVDAMKSVNLTALTTRRQAEEHMSDGVPDPNIRQFLLQNLRHETGNHERWYW QMNLDLLGNGLSDIGSWPPVTSIWEGPALWITAEQSDYVGPDHSQAMHELFPQVRRIRIK NSGHWVHSDQPGVFVQVLAAFLSRCQGPLTPR >gi|302034473|gb|GL383162.1| GENE 209 208167 - 208937 492 256 aa, chain - ## HITS:1 COG:Cgl1611 KEGG:ns NR:ns ## COG: Cgl1611 COG0652 # Protein_GI_number: 19552861 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family # Organism: Corynebacterium glutamicum # 63 236 79 258 280 105 36.0 1e-22 MTRRATTAVAVAGLSLLAGCSQTNGTVPGVSDSPDAWWTSLPSATSGSANSRAATHAAGT ASATTTPAPAAASGPCGYAVAGKAARPVDMPPSDNIEKTGSTTVTLTINDAPVVLTVDRA MAPCAANAFISLAEQGYYNDTSCHKLSTGDAKYLQCGDPSGTGNGGSGYSYPVEKEAKAG GSVGSGTLALVADSQHRLGSQFALVYGDSKLSDSFLVIGSIDKDGAGSISDIAHKGLADD GLTPKVDTKIGSVVMG >gi|302034473|gb|GL383162.1| GENE 210 209058 - 210074 816 338 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4161 NR:ns ## KEGG: HMPREF0675_4161 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 338 1 338 338 616 100.0 1e-175 MDRQSNRFSWHPGIVGPDQEVSALITLVQSFSDTGLVQARVRDAILSQLPHHELGEFDID LLLDHRDSRQPIIFDTDHFEGYERPRLVLHEVTDQLGQAFLVLEGPEPALGWESLVSSLT SLVDSMGIRLTVITDSIPIPTPHTRPAIVTRWASRPELILGSTSPFGRLQVPASFPVVLG QRLGETNHAVIGLASHVPHYLADLDYPESARALVEALRGATGLALPINSLAVAANTVRAE IDTQVNNSEELKAMLHALEEQYDSRVAQRELGTTQVAVPDAEDIGAEVEDFLRSIDEDDG PSNDDPDTQGSGPRRSSDDTSDDDKPDYHPRRGGDLDN >gi|302034473|gb|GL383162.1| GENE 211 210110 - 210721 368 203 aa, chain + ## HITS:1 COG:Cgl2327 KEGG:ns NR:ns ## COG: Cgl2327 COG0443 # Protein_GI_number: 19553577 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Corynebacterium glutamicum # 16 193 251 426 484 139 44.0 3e-33 MDLGVDLGTTYSAVAAMEFTLRRERNLLVDLDSTILHIPMAEVARACKPLIDRTIETMEP LSSLLNGANSDIAGIHLVGGTTSLPIVPRRLRELCGRKVHRSPHPTPATAIGLAVAADAG TLGIGDRLSRGFGVFRETESGGGIEFDVLTDQTTRIAGTTIITRKYRCRHNIGVFRFVEF SRTDAIGEPVGDLIPPRYRRFPP >gi|302034473|gb|GL383162.1| GENE 212 210923 - 212677 1038 584 aa, chain + ## HITS:1 COG:BS_yvaC KEGG:ns NR:ns ## COG: BS_yvaC COG1289 # Protein_GI_number: 16080408 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Bacillus subtilis # 271 443 315 487 631 63 31.0 9e-10 MSKPNQPSKPRQLIRKLITIHSAPGRSRQAVISVIPIAVSLVTMGLIVSPTHAAMGMIGA MGALAGNNNAPLSRARILFGVGTATIFSQCLGLMSVQIEWLLPIILASWSLIVIWVWHAL QLGPPGPLNILFAAAFGTYMASRGWTVSTVFTSTVPSFLIAAIVSMIIILASPHRPVRAA VKKAENAVNAYCEPDDDADSHEVARLRSAAHAAIHLAWWAYNDGHSSGVDNPSEMSELSD LRARLITAHMRLEHELRLEAFPSADVSLPDHVDWTPLGRPKASYLLRTALERGSRPTMVA LRAATGVFFASLLMILLPFGHPYWAVLSVLIMIHMDATRSDMTIRAIHRVLGTVVGLGLY LAIAAFGPSGWVKIGLIIVFLWTMQALVTRNYGLACIFITCFALFMTPLTKPGQMYQLAQ DRIVETIVGLTIGIVTIHIVGRRAPVLLVRSQYRRTLRSMMPVLRSLSQGRTKTPQAQIE RNQMVHELIQGSALLSATRPDAPQALQDWSKVDRTVTETGYDLLSVCWHTGNGPVPWARR LLADIAIFITGLPPISSQNLDAHSVAEEMEKIRMDMVTSLPGVK >gi|302034473|gb|GL383162.1| GENE 213 212752 - 213324 308 190 aa, chain + ## HITS:1 COG:BH3630 KEGG:ns NR:ns ## COG: BH3630 COG1739 # Protein_GI_number: 15616192 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus halodurans # 2 159 29 180 213 110 38.0 1e-24 MRVTCEDEAREVIAQARHDGHNARHHVSAFVLGADRGVQRCNDDGEPAGTAGMPTLAALT AADPKGNPDLSDVVAVTSRWFGGIKLGTGGLTRAYGNAVSNALTVAAFHRRVMMDTFTTT IGLRRAGHEEGVIRAAGHDVTNVEYTAKGSIVTLACRADRGSQMAIDLAKLLGREVRLTP ARQCWVDIEA >gi|302034473|gb|GL383162.1| GENE 214 213351 - 214280 529 309 aa, chain + ## HITS:1 COG:BH1953 KEGG:ns NR:ns ## COG: BH1953 COG1597 # Protein_GI_number: 15614516 # Func_class: I Lipid transport and metabolism; R General function prediction only # Function: Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase # Organism: Bacillus halodurans # 51 307 38 294 295 85 26.0 1e-16 MPYASGVQAFQPRKVAVVHNSVKTQNNPHWHDLIEKKCREHCGVTPVFFPTTADDHGQGL ACKAVDEGAEMVLALGGDGTVRQVSAGLANTGVPMGILGMGTGNLLARNLELPHTDLAAS LDAALTRPVRAIDLGYVRFDESEEICFTVIIGMGMDAQTMAGTRDRLKDKVGWLAYVASG ALTLVQPGFQVRASVDGRRPVITRARTMLVCNCSVLPGGVVLVADGRIDDGALDVLTLSP HGIVGWIAVLNHFVTRHRHGHRLVRHATSRTALVMSGSGPILAEVDGDPIGTVTTMRTRV APGALLVRA >gi|302034473|gb|GL383162.1| GENE 215 214289 - 214978 469 229 aa, chain - ## HITS:1 COG:DR1451 KEGG:ns NR:ns ## COG: DR1451 COG0775 # Protein_GI_number: 15806467 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside phosphorylase # Organism: Deinococcus radiodurans # 1 221 9 227 238 148 44.0 8e-36 MGAMEDEVRLIRADLDDVEELDGPCELLRGRLDGTPVVLAKCGIGKVNAALAASAMVQAG ATRIVFTGVAGAVAPGLGIGDVVVGNRFQQHDADDTAFGNPIGTVPGEPPYWEPDPVLFA LVLDVLRALEEPRGHQVVAGPIVSGDQFIAQAEKVAWLRATFGASAVEMEGAALAQAANR LGVPFAVVRILSDSADGDAVADFPAFLNNAAHRGRDLAHALARQHRLTA >gi|302034473|gb|GL383162.1| GENE 216 215038 - 215658 410 206 aa, chain - ## HITS:1 COG:PA3199 KEGG:ns NR:ns ## COG: PA3199 COG0009 # Protein_GI_number: 15598395 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation factor (SUA5) # Organism: Pseudomonas aeruginosa # 1 205 1 205 209 212 48.0 4e-55 MSKYFPVHPENPQQRSLNQIVDILHHGGLIAYPTDTGYAFGARLGNKDAVDRIRKLRQLS DKHHFTLVMSQFAQVGQYVQMDNWVFRAVSAAVPGRYTFILNATRDVPKVMLHPRKKTVG VRVPEHVTALALLEALNEPIVSSTLILPGQDTPMVDGWQVQDEIGDQLDAVLDSGDCGVE PTTVVDFTSGEAVVTRRGAGDPSLFE >gi|302034473|gb|GL383162.1| GENE 217 215685 - 216056 169 123 aa, chain - ## HITS:1 COG:no KEGG:PPA1091 NR:ns ## KEGG: PPA1091 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 123 60 182 182 171 100.0 1e-41 MSVLVTVLLPILLISAGVAVDGAERSRAVRVAHTVAAEAARAGCEEGSAAQLVGQDGSSA ARMAAEASARRAKADGLSQLVIDVNGDAVSVATEITRPTRLLALIGLTEVHGRASEMCTL LAR >gi|302034473|gb|GL383162.1| GENE 218 216283 - 217482 1372 399 aa, chain + ## HITS:1 COG:AGc3836 KEGG:ns NR:ns ## COG: AGc3836 COG0205 # Protein_GI_number: 15889397 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphofructokinase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 398 112 509 514 483 59.0 1e-136 MAVKKVALLTAGGFAPCLSTAISGLIQRYTEVAPEVEIIAYKHGYEGLLKGDFLEVTDTV RKNAEILKRFGGSPIGNSRVKLTNAADLVKRGLVAEGDDPLKVAADRLVADGVDILHTIG GDDTNTTAADLAAYLAENNYGLTVVGLPKTIDNDVVPIRQSLGAWTAAEQGSRFAQNIVG EHNSGSRMLIVHEVMGRNCGWLTAATAAKYREWLDTQQWLPEIGLSKKAWDVHAVYVPEA HIDLEAEAARLNKVMDEVGNVTIFLSEGAGLDAIIEEMEKDGQEVPRDPFGHVKLDKVNL GAWFGKQFADKLGAEKVMVQKSGYFSRSAASNEADLELIGRCTDLAVDCALAGKTGVIGQ DEENGDTLTNIAFDRIKGGKPFDTTQPWFTAMLSEIGQA >gi|302034473|gb|GL383162.1| GENE 219 217563 - 218714 695 383 aa, chain - ## HITS:1 COG:SSO2127 KEGG:ns NR:ns ## COG: SSO2127 COG0477 # Protein_GI_number: 15898911 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Sulfolobus solfataricus # 22 344 53 382 430 77 24.0 6e-14 MFTLPPLFTAWWGAVTKASDASLGWVTTCAVLASGMLTYVAGIVRQQVGTRWMYVVATVL MLVSLAVVLVNPRSLPIAYVWALLSGASSAFTYSPSLTAVQEWFPRRLGLVTGLVNASFA LPAAAAAPIVAGMLRNWGFTATVLTLMVAVALTQMMVIFLSTPYWLEKKHAEELAVARRE ISGPAVTTAQAVRTPAFWQVWAMWFAGGGAAITMMTFAATYSAHLNDIGVQVSAVAAVTA FVSGNGLIRVVNAMLLDHIGPTVIGGVTSVTLAFGYMLLGFVASGWALIVVAFLAGVALG TIFTISPVLLTPLFGIKHFGPIFGLAFSAYGIFGAFAGPMFSSYLAQRLGYGLVFIYLAL LMFWAFLSVLAVGRSQQRMATWA >gi|302034473|gb|GL383162.1| GENE 220 218503 - 218922 125 139 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSGPLTARRLQLSCPAVALVALVQGVISPHVVGSSRTQKGNCDFARVFVTESQLRLSSQS SGYVVSRSRHVHVASPVYRMVGGRHEGLGRIIGLGDDVRGPCVGDADLCRWDRPAAGGYP LDVCCGDGSYACVSSSRAG >gi|302034473|gb|GL383162.1| GENE 221 218945 - 220201 1054 418 aa, chain - ## HITS:1 COG:ECs4402 KEGG:ns NR:ns ## COG: ECs4402 COG1295 # Protein_GI_number: 15833656 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 4 288 41 323 337 147 31.0 4e-35 MKDTITAIMKRPSIAHLLRAHTRFNRRLGNHFAASITYFTVLAIIPVVAFAFAVLGLVLS RLSPYLLNQVVDSVVGLATESSDKQQIRAIIENAMKVGGSVWAFVVSILTALWAGIGWVG NIRKGIQAEWAPDFDMVGDDRGFMRAKLSDMLTFLGLLLVTLLTIITSQVGSSMTGMLAR WTGLDSIPGYGLLLTLAGLVATTIAGWLLFIFLYTVMTRVKTSWPPILKGSLAAGFALAL VQVGAGYLVRAFNSNKAVQAFGSIIIVMLVFDLVARLILFIASWIATANQPAIDKEWNDC DEPLLGREDCMTAEGHWEAALADRTAKQATKDDEDDKEVVPPGYTVVDGVARENSNGGDQ WRYKTEDAVSLDNAPASSGTVASSYTKPHRWPIIGASIVGAIGGIAVSAILGRRREER >gi|302034473|gb|GL383162.1| GENE 222 220309 - 220896 586 195 aa, chain - ## HITS:1 COG:Cgl1409 KEGG:ns NR:ns ## COG: Cgl1409 COG0789 # Protein_GI_number: 19552659 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Corynebacterium glutamicum # 22 189 18 186 191 191 56.0 8e-49 MATTGEQPSVEIPLDGHARRGQDALFEGDFAPLPEDIGFRGPVASGAAGISYRQLDYWAR TGLVRPEIRAARGSGSQRLYSFRDILMLKVVKRLLDAGVSLQQIRVAIDHLRSNGAEDLS RVTLMSDGVSVYECTNDNEVIDLLHGGQGMFAIALGGVWRDVQGSLAELPSERLNPVVDT ELDEFTARRIAKHAS >gi|302034473|gb|GL383162.1| GENE 223 221078 - 221557 358 159 aa, chain - ## HITS:1 COG:MT1877 KEGG:ns NR:ns ## COG: MT1877 COG1259 # Protein_GI_number: 15841299 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mycobacterium tuberculosis CDC1551 # 4 151 4 161 164 107 41.0 7e-24 MVLLEVAEIRTKPVSGAAVLLLREADGRRHLALWIADPEKTAIADAINETEPVRPLTHDL LARAIAVLCEEEPQCIITKVEDGIWFGELVLGDMRIDARPSDLVALALRLPVPIWCTEEV ISTAGILLDAGPEDALEEFRHFLDDVSPDDFGPGPSTSG >gi|302034473|gb|GL383162.1| GENE 224 221588 - 222301 523 237 aa, chain - ## HITS:1 COG:MT1876 KEGG:ns NR:ns ## COG: MT1876 COG0789 # Protein_GI_number: 15841298 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Mycobacterium tuberculosis CDC1551 # 7 227 13 237 247 143 38.0 3e-34 MPRSVRTIGQVMKTLKPDFPDLSISKIRFLESEGLLSPERAPSGYRKYSDSDVERLRYIL TCQRDHFQPLRVIRDHLEMMDRGEEPPVSEAPPLPTENEGTPDPQPQPTGQGIVRTRGPI RMNRRELIRASGITEAMLMELERHQLVRPKRGASYFGQEALVICVAARRLAAYGMDTRHM RAIRQAAEHEAGLIEQALIPHARHPEQASKIAAETTKVMMHAHTAMVYDMLEHWSGN >gi|302034473|gb|GL383162.1| GENE 225 222301 - 222825 441 174 aa, chain - ## HITS:1 COG:MT1875 KEGG:ns NR:ns ## COG: MT1875 COG1716 # Protein_GI_number: 15841297 # Func_class: T Signal transduction mechanisms # Function: FOG: FHA domain # Organism: Mycobacterium tuberculosis CDC1551 # 60 171 48 161 162 112 56.0 3e-25 MCGHVSEDGANFCSRCGTRLGVPIDTPGDNTGVIPTITEPTVAEETSPNVDLPAGVLQDI ADLPAENAMLIVRRGPNLGAQFLLDQDETTAGRSTHSDIFLDDITVSRHHVKFIRQDGRM VVEDQGSLNGTYVNRTLVDGSAVLRDGDEVQIGKFRMTYHTGGTASGTSGAGRV >gi|302034473|gb|GL383162.1| GENE 226 222876 - 223268 256 130 aa, chain - ## HITS:1 COG:ML2077 KEGG:ns NR:ns ## COG: ML2077 COG0509 # Protein_GI_number: 15828123 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system H protein (lipoate-binding) # Organism: Mycobacterium leprae # 1 124 1 130 132 77 36.0 5e-15 MTEIPDDVLCTSDHLWIRPGNGSRVRLGVTSVLLDHFGPVESVSLPDDGEEVVSGDSCGD VEFSVRTWEIISPVAGEVVAVNPSIDADQVEADPWGDGWLFDVRLSDPEQLDELLDPDEY LASVGEVPLK >gi|302034473|gb|GL383162.1| GENE 227 223345 - 224097 467 250 aa, chain - ## HITS:1 COG:MT1873 KEGG:ns NR:ns ## COG: MT1873 COG3879 # Protein_GI_number: 15841295 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mycobacterium tuberculosis CDC1551 # 32 250 72 292 292 127 34.0 3e-29 MPDHHDRREWAENHWRKIGKDLASVSTGQILVAIILCLCSFMVVTQVRSRHDQDAYSTMS RADLVTMLDSLSDSSRQLDSEIADLRATTRDLQSGADSRKVARQEAEERLTRMKILAGTI PVHGPGIKITIDDPEDKVTSDMVLDAVEEMRDAGAEAMVLNNKVRIVADTWFAASPDGLQ VSGTTVTRPYTLTIIGQPHALKEGAKFRGGLVSQMESDKVGASVEVTTSRDLTITAVARP QPMTHATPVR >gi|302034473|gb|GL383162.1| GENE 228 224090 - 224422 460 110 aa, chain - ## HITS:1 COG:MT1872 KEGG:ns NR:ns ## COG: MT1872 COG3856 # Protein_GI_number: 15841294 # Func_class: S Function unknown # Function: Uncharacterized conserved protein (small basic protein) # Organism: Mycobacterium tuberculosis CDC1551 # 1 110 12 121 121 99 61.0 2e-21 MIALIGLVVGIIIGIVVNPTLPPGLQPYLPIMIVAALDAIFGAVRAYLAHTFSDRVFVVS FLSNVAIAALIVWVGDQIGVGSQLSTAVVVVLGIRIFTNAAAIRREVLHA >gi|302034473|gb|GL383162.1| GENE 229 224465 - 225208 376 247 aa, chain - ## HITS:1 COG:MT1871 KEGG:ns NR:ns ## COG: MT1871 COG3879 # Protein_GI_number: 15841293 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mycobacterium tuberculosis CDC1551 # 33 235 98 295 309 80 31.0 4e-15 MDLLREVRGQALDQGYQEHHDRNPGATSRRPVGVIAVALLLVTGVLIGIAWRSTVARAPL DARERKNLVAHVQSAQAHESAQHAELAKLRASVNVMKAAEATPRNDEAGQDSAMIPMAGP GVRIILDDANAAPADELGDKDMRKLVNAVWQSGAEAVAINGHRIGPRTAIRSAGSAITVD YVSLSRPYVVEAIGSPQKLPAELADTPGGRWMTYLRDNSSITYQVTTKDRVSVPGSKASV SHASPHR >gi|302034473|gb|GL383162.1| GENE 230 225229 - 225882 195 217 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 23 204 475 669 904 79 25 2e-13 MTRVDVVTRTLPPNEVSEANPWDTDRFWTVPNVLSVIRLIGVPIFLWLALGPRADGWAVA VLAVAGLTDWLDGRIARRWHQVSRIGQMLDPVADRLYIFATVIALTLRDVIPLWLVIVLI ARDVCMACLMPALRTRGFTSLPVHFVGKAATFCLLYSFPLVLLGRFGTGGWTACRVLGWA FAVWGTGLYWWAFFLYLVQTIRIVRTLPRISSRGEYS >gi|302034473|gb|GL383162.1| GENE 231 225928 - 226566 462 212 aa, chain - ## HITS:1 COG:ML0454 KEGG:ns NR:ns ## COG: ML0454 COG0558 # Protein_GI_number: 15827145 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylglycerophosphate synthase # Organism: Mycobacterium leprae # 11 206 9 199 239 106 36.0 4e-23 MRGWVMLEHFRAGWAKVMNPIADALLRAHVTPDVVTWIGTIGAVLMALICFPQGWLWQGP WLVTLFIFSDSLDGNMARKLGRHSQWGSFLDSTLDRFGDAAIFTGVALYFAGPGNSVLWT AMACAALVFGMATSYVRAKAESLALEAKVGIATRADRLLVSLVAIEITGLARVGAFPHWC VVALPIALCYLTLAGAITVVQRMVAVRRACES >gi|302034473|gb|GL383162.1| GENE 232 226544 - 227104 409 186 aa, chain - ## HITS:1 COG:ML0455 KEGG:ns NR:ns ## COG: ML0455 COG0537 # Protein_GI_number: 15827146 # Func_class: F Nucleotide transport and metabolism; G Carbohydrate transport and metabolism; R General function prediction only # Function: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases # Organism: Mycobacterium leprae # 14 182 23 190 206 184 50.0 1e-46 MTEDYRLEFAEELVGVPDPFRRFWTPYRMAYISGENKPRGNRPEDGCPFCRAPQRSDEDA LIVHRGEHCYVIMNLYPYGPGHMLVCPYRHVAGYVDATQDEVVEMAELTQDAIRTLQEVS RPQGFNVGINQGASGGAGVAAHLHQHVIPRWTGDTNFLPIVAGVRAVPQLLGDGRQMLAD AWVGHA >gi|302034473|gb|GL383162.1| GENE 233 227097 - 229151 1856 684 aa, chain - ## HITS:1 COG:ML0456 KEGG:ns NR:ns ## COG: ML0456 COG0441 # Protein_GI_number: 15827147 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Threonyl-tRNA synthetase # Organism: Mycobacterium leprae # 15 679 38 697 702 767 57.0 0 MSISITLHRSGTSRTQQVDTTTTGLDLFGSDRAVVAMRVDGNLVDLQRELHDGAEVEPVE ATSEDGLNIIRHSATHVMAQAVQQLYPEVNLGIGPFITDGFYYDFGNIEPVTPEVLSELE KRMKRIVKENQRFVRRVTTEESAREELADQPYKLELIGTKGKGAEGASVEVGGGELTIYD NVRRNGEVAWKDLCRGPHVPSTKYLANTFALTKFSAAYWKGDQANDQLQRIYGTAWASRE GLAAYQQRIKEAERRDHRKLGAELDLFSFPEEIGPGLVVFHPKGAMLRHLIEEHVIARHM EAGFNFVHTPEITKGGLFHTSGHLPYYADTMFPPMLVDEERDEEGNVTRAGQEYYLKAMN CPMHNLIFRSRGRSYRELPLRFFEMGHDYRYEKSGVVHGLTRMRGFAQDDSHTYCTREQA PGEIKKQIEFFLSILADFGLNDFYLELSTRESDSAKKEKFIGSDEDWQVATDTLDQVCRS TGLQLVPDPGGAAFYGPKVSVQVRDAIGRTWQMSTIQYDFNQPERFDLEYAAADGTHQRP IMLHSAKLGSVERFIGVLTEHYAGAFPVWLSPVQVRLVPVAEAFNDYVTGFAEVLGSRGI RVETDLSSDRFGKKIRNASKDKVPFILIAGGEDAEAGAVSFRLRDGSQVNGVVLDEAVRI IAAWDSRHRNDDPTAETLRGVVDD >gi|302034473|gb|GL383162.1| GENE 234 229240 - 229872 530 210 aa, chain - ## HITS:1 COG:Cgl1963 KEGG:ns NR:ns ## COG: Cgl1963 COG2197 # Protein_GI_number: 19553213 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Corynebacterium glutamicum # 3 209 2 210 210 188 50.0 6e-48 MTVRVLIADDHPVVRAGVTALLDTDPDIEIVATAATPSEALAATATVDLDLVLLDLQFSS DADAPSGVDVTRKIRSQPNAPEVLILTNYDTDADILAAVEAGATGYLLKDAPAEDLLSAI HRSARGEGALAPAVATRLMARMRSPRTSLTARELDVLEASAQGLSNAQIAEFLVVSEATV KTHLSHIYTKLGVTSRSAAVAKARDIGFIR >gi|302034473|gb|GL383162.1| GENE 235 229869 - 231137 820 422 aa, chain - ## HITS:1 COG:Cgl1964 KEGG:ns NR:ns ## COG: Cgl1964 COG4585 # Protein_GI_number: 19553214 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Corynebacterium glutamicum # 99 405 69 369 377 144 34.0 3e-34 MRTTTLARDGLYRWRGMDAGHRGRAVAIEVGMQVGIQVLFAGLVIFTLVMALVLSPPRLG RILGWAALLIVVYTALMGTHVMSRSRREMWRPLLVTVMVVVSILLAIDFPYAAYLTIPLS FVYLDHLPPLQACVAVVVGAVAILLGVGLTGGWSVGGIVGPVAGAAVAVVVGLSLKAMQA QAAELERLNVDLLAVQKRLADSQRQAGVLEERARLAREIHDTVAQSLSSIGLLLSAVERT APDHPAIEQIRLAHLASSDALSETRGLIAELAPPTVVHQGLSAVLERLGATTWSIGGLHV DVDCPDTSDLPMEIQTALLRLCQAAMSNVVRHAHARHASIRIVRPNPGHVLLRVSDDGVG MDLDAPVRDGAFGLQAIRQRVEAASGEVSLTSKPGEGTRVEVDLPCRAASPHIDRHSQGE SS >gi|302034473|gb|GL383162.1| GENE 236 231134 - 231361 81 75 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|314918314|gb|EFS82145.1| ## NR: gi|314918314|gb|EFS82145.1| hypothetical protein HMPREF9598_01291 [Propionibacterium acnes HL050PA1] # 1 75 1 75 75 136 100.0 6e-31 MSDEPMPPRIGVKLIPTGWLSSTPSSRDTLASVYDLVMRRFWPEASLDSLDCATCGSELQ GPRRYTYVRTYTRGR >gi|302034473|gb|GL383162.1| GENE 237 231358 - 232419 984 353 aa, chain - ## HITS:1 COG:Cgl0330 KEGG:ns NR:ns ## COG: Cgl0330 COG1064 # Protein_GI_number: 19551580 # Func_class: R General function prediction only # Function: Zn-dependent alcohol dehydrogenases # Organism: Corynebacterium glutamicum # 1 352 1 352 353 517 76.0 1e-146 MPIIVKALQKDGPDRPFKVVEIERRDPRPDDVVIDIKAAGICHSDIHTIRNEWGQAHFPL TVGHEIAGIVEAVGSEVTKYKPGDRVGVGCLVNSCGHCEQCEAGEEQACLNGPVGTYNAH DVDGSITQGGYSQKIVVNERFVCRIPDSLDFVKAAPLLCAGITTYSPIAQWNVGPGQKVA VLGLGGLGHMGVQIAAAKGADVTVLSRSLRKEKFAEKLGATRTLATSDDNFFRDHRGEFD FILNTISALIDVSAYLKLLKPRGVMACVGLPPEELGLQVGSLINGSKVLAGSNIGGIPQT QDMLDFCAEHRLGAWVEKIGVDEVDAAYDRVVAGDVRFRFVIDTATFRAVGAG >gi|302034473|gb|GL383162.1| GENE 238 233401 - 234255 668 284 aa, chain - ## HITS:1 COG:DR0132 KEGG:ns NR:ns ## COG: DR0132 COG2326 # Protein_GI_number: 15805171 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Deinococcus radiodurans # 36 273 29 259 266 213 44.0 4e-55 MADNFPQLSDVLRCPQAPVDVNSINTDATPQAPGGKRETLEQFQPMAEELSELQERLFAR GRNNPDHARRVLIVLQGLDTAGKGGVVRHVVAMVDPQGINHHSFKAPTQEELRHDFLWRV KKALPEPGMLGVFDRSHYEDVLVPRVENLVEEEVWKKRYDLINDFEMNLAARGTNIIKCF LHISPGVQKERLAARLNDPAKYWKYDPGDLDTRSKWAEYIEAYNELLSRCNPDVAPWYII PSDHKWYRNWAMGRILLETMRSMKLTWPPANFDVEAEKRRLEQA >gi|302034473|gb|GL383162.1| GENE 239 234653 - 236107 1094 484 aa, chain - ## HITS:1 COG:YPO1743 KEGG:ns NR:ns ## COG: YPO1743 COG1113 # Protein_GI_number: 16122000 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Yersinia pestis # 34 482 6 449 457 447 52.0 1e-125 MSTRLGGSSPAAGCPAVPSRFGAAGSGAPSGTEQEQGLQRGLKNRHIQFIALGGAIGTGL FYGAAESIEQAGPAIMVCYLIGGAVIFLIMRALGEMSVEHPTSGAFSYYAYRNWSPRAGF VSGYNYWFNYIAVSMAELTVVGKYVNFWFPQIPEWLSAGAFLVLITIINLTAVRAYGEFE FWFAVIKVVAILAMIVLGVLIIATGLGGGPPTGIGNLWRHGGFFPTGISGMLCGFVVVMF SFGGVELIGITAGEADDPRRSIPRAINQVVYRILIFYIGAISVMLCLFPWNQIGKAGSPF VTIFDKIGVAGAANILNVVVLTASMSAYNSGLYSNGRMLYSLAAQHNAPGIFWKTNRLGA PWVGVLASSVVTATAVLLTYLIPGKVFLYIISIALISGVINWTMIIITNLKFRRRIGPEG VAALEFRMPGNPVTSYVVLVFLALVVVIMAMMPSYRVALVVGPVWLALLWVGYDVSCLVR RRHA >gi|302034473|gb|GL383162.1| GENE 240 236112 - 237488 1146 458 aa, chain - ## HITS:1 COG:PM0811 KEGG:ns NR:ns ## COG: PM0811 COG3033 # Protein_GI_number: 15602676 # Func_class: E Amino acid transport and metabolism # Function: Tryptophanase # Organism: Pasteurella multocida # 3 456 4 456 458 437 48.0 1e-122 MKYIPEPFKIKMVEPIAMTSREERANILARAHYNMFGLPAESVYIDLLTDSGTGAMSDAQ WAAVMRGDEAYSGGRSYMHLMDVAGSIFGYSYIQPVHQGRAAEKVLMPLLVSRPGQLVVA NTFFDPTRAHVGLAGGRPVDNVCSEGLDSAKVAPFKGNMDVAGLEKLIAEHGDDIAAIVM TVTNNSVGGQPVSLQNMRETYEVAHKYAIPVCLDAARYAENAYFIHEREEGCQDRSLRDI VAEMFRYGDMFVMSAKKDAIVNMGGLLGVREDGELAEKVKSNVISFEGYLTYGGLAGRDL EALAVGLEEGLDMDWQRYRVGQIQYLGDQLEEAGVPFQSPVGGHAVFIDAGRMLPHLEWK QYPGHALATQLYLDAGIRSCDIGSYLMDRDPVTQEEQQAPFEFTRLAVPRRVYTQSHMDV VAEAVTKIAREPEKVPGYRITWEPPVLRHFTSRLEPIR >gi|302034473|gb|GL383162.1| GENE 241 237463 - 237684 80 73 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|327453913|gb|EGF00568.1| ## NR: gi|327453913|gb|EGF00568.1| hypothetical protein HMPREF9586_01873 [Propionibacterium acnes HL083PA2] # 23 73 1 51 51 97 98.0 3e-19 MIHRVSEVRMGSRGCGAVVLGCVIKFNKPLTRMMRGERIAISVEGINGNWSTSVQQVLQA HEGVCNEVHPRTV >gi|302034473|gb|GL383162.1| GENE 242 237709 - 238377 392 222 aa, chain + ## HITS:1 COG:RSp1517 KEGG:ns NR:ns ## COG: RSp1517 COG2964 # Protein_GI_number: 17549736 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 8 206 17 210 214 78 31.0 1e-14 MITALAGLVDPLKRSLIGSSEVVLHDLSKMPNSIVAISGHLTSRNIGDPATEALLRAWRE GTMQTRIGYESTSPEGRALRSSTILIEDADGPFAALCTNTDVSVWQGVHDMTAAILHGGP WPGETPAPQIPHHQDPPRDIKQVAAGLMREAIDQVGVPVSLMRKDHKLRVVDELRRRGFF LLKDSIEATANRLKVSRFTVYNYLNELEERGDADTDDSGKSA >gi|302034473|gb|GL383162.1| GENE 243 238641 - 239414 372 257 aa, chain + ## HITS:1 COG:no KEGG:PPA1066 NR:ns ## KEGG: PPA1066 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 257 1 257 257 453 100.0 1e-126 MAAPVLDLVLPALSETSANLIGQRLRQRMSHLHPHIESTVSFVPAAGQYKAPRIKLSWRE LVLVPVNATHLHSNPPQVVQHAAELHRSHPDLAIKVARPTGPAPVLLNLVDARLRLAAHR VHAQELDSLVLSSPDGGDLRGAAMLSKLTRLWSQHHHLPVRIATNRGGATAVEEVVARLR QEGRRHIAVGSLWICDDENFRIHTRRALHAGAEVVAAPLGDDPVLASLAFERYCSAAMGL VPQPTDSPPHPPELHSN >gi|302034473|gb|GL383162.1| GENE 244 239605 - 240051 326 148 aa, chain + ## HITS:1 COG:MT2748 KEGG:ns NR:ns ## COG: MT2748 COG0229 # Protein_GI_number: 15842212 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Conserved domain frequently associated with peptide methionine sulfoxide reductase # Organism: Mycobacterium tuberculosis CDC1551 # 12 143 3 133 136 176 65.0 2e-44 MDHEHTATYDLQPHLVLTPEQWHERLSDEEYYVLREAGTEAPFVGEYTDTTTEGVYRCRA CGAELFRSTQKFHSSCGWPSFYAPLAEDRVRYLNDESLPGRPRTEVRCAQCDSHLGHVFA GEGFDTPTDLRYCINSICLDLVPTDETT >gi|302034473|gb|GL383162.1| GENE 245 240170 - 240739 443 189 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4124 NR:ns ## KEGG: HMPREF0675_4124 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 189 1 189 189 351 100.0 1e-95 MYPVVFDELRSRILGYSWSDKLEVHEIPAPTRISPFSVAIEGSVAIREDELGSGRLILLH DPSGSEAWQGTSRFVAMIRADVDPSMASDPLVGRVAWSWLTDSLESHHAVYHAEAGTVTS VVSRPFGQLAADPESNHIELRASWTPTFSTAEDVDSHLGSWSDLCLLSCGVSPIPDDIAA ISPRRAEFA >gi|302034473|gb|GL383162.1| GENE 246 240736 - 241974 288 412 aa, chain + ## HITS:1 COG:Cgl1855 KEGG:ns NR:ns ## COG: Cgl1855 COG0349 # Protein_GI_number: 19553105 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonuclease D # Organism: Corynebacterium glutamicum # 7 397 5 388 403 254 39.0 2e-67 MSDLPILAEPREGVPPVVNTPDSLTHTCRALSNGHGPIAIDTERAHGFRYSPRACLIQLR RDGSGTHLVDPLALGGAVGLKPLAKALAGTQWILHAATQDMPCLAMDGLRPDDLFDTELA GRLLNLPRVSLGPMVERYCGVTLLKEHSASDWSRRPLPRDWQVYAALDVELLNDLREKIL SDLHEAGKEEWARQEFAHLVEVAADLPSEEPGIDPKRWRKLSHIGDIHSRAGLQLAHDLW LARENLAHDLDIMPGRLLRDEALVAAARHCDRTGNVDVETVLAIRGFHRGRAKKYRQTWA EAINHARSVSPTKYPPLREPSSGIPHPRSWERHHPEEAARWAAVRPAVNDVAADHDVPPE NLCTPTWLRHFAWQPPEDCSVEGVDVFLEGLGARPWQREILSGPLSAVMATL >gi|302034473|gb|GL383162.1| GENE 247 241990 - 243894 1342 634 aa, chain - ## HITS:1 COG:MT2756 KEGG:ns NR:ns ## COG: MT2756 COG1154 # Protein_GI_number: 15842220 # Func_class: H Coenzyme transport and metabolism; I Lipid transport and metabolism # Function: Deoxyxylulose-5-phosphate synthase # Organism: Mycobacterium tuberculosis CDC1551 # 13 629 1 623 638 625 54.0 1e-179 MTAVGPKMPRMALLDDIGCPDDVRKLTTKQAEDLAEEIRAFLIDKVSRTGGHLGPNLGVV ELTIALHRVFDSPHDPIIFDTGHQSYVHKILTGRANGFEKLRQRGGLSGYPSRAESVHDW VENSHASASLSWAEGMAKGFLSQGEDRTVVAVIGDGALTGGMAWEALNSIADQQGLRLVI VVNDNGRSYTPTVGGLANQLAIIRTDPHYEEALDRMKRHVTDKPLGKQVFGLMHAAKAGV KDALIGNGIFSDLGIKYLGPVDGHDVLSVERALELAKRYGHPVIVHVMTTKGKGFAAAEA NEEDHFHAVGRIDPVTGASLKASGGASWTQAFAGAMVELGERRPDIVGVTAAMLHPVGLA PFAARHPDRVLDVGIAEQHAVTSAAGMAAAGLHPVVALYSTFLNRAFDQLLMDAGLHHAG VTIVLDRAGITGTDGASHNGMWDMAMCGIVPGLMLSAPRDRQHLVSVLNEAVDIDDRPTV IRYSKDPIPDDIRIVTSHDGLDVLCDGPEDGILLVAHGQLCAEALAAVDQLDSPVRVVSP RWSLPVCGGLIEEAARARAVVSVEDGLVVSGLGSHLADALSQRGMWRPIRSLGIPQRYLD HDSRSAIMAELGLDSRGIADAVSQLVAQLDGEYS >gi|302034473|gb|GL383162.1| GENE 248 244195 - 246861 2487 888 aa, chain - ## HITS:1 COG:XF0290 KEGG:ns NR:ns ## COG: XF0290 COG1048 # Protein_GI_number: 15836895 # Func_class: C Energy production and conversion # Function: Aconitase A # Organism: Xylella fastidiosa 9a5c # 4 885 3 901 908 1050 57.0 0 MSVNSFNARRILDVDGQSYEIYDITKVDGSDNLPYSLKVLLENLLRTEDGANITAEQITE LGHWDADAQPSKEIQFTPARVIMQDFTGVPCIVDLATMREAVADLGGDPRKVNPLSPAEM VIDHSVIVERFGTPEAFEQNKDIEYQRNRERYQFLRWGQSAFENFRVVPPGTGIVHQVNI EHLARVTFIRDDDGTKVAYPDTCVGTDSHTTMVNGLGVVGWGVGGIEAEAAMLGQPVSML VPRVVGFKLSGELSDGVTATDLVLTITQMLREHKVVGKFVEFYGPGVAAVPLANRATLGN MSPEYGSTIAVFPIDDVTLDYLRLTGRDESQVKLVEAYAKAQGMWHDPQHEARYSEYIEL DLSTVKPSIAGPKRPQDRILISEAKESFEKTVGDYTTNPGAAVPVTLADGRSFELRNGAV TVAAITSCTNTSNPSVMIAAGLVAKKAHELGLAPKPWVKTSLAPGSQVVTDYFERAGLSE HLAAMGFDLVGYGCTTCIGNTGPLIPEVSAAINENDLAVTAVLSGNRNFEGRISPDVTMN YLASPPLVVIYSIAGTMDIDLNNDVLATTPDGREVRLVDLWPSTEEIEEIVGSSISAEMY SERYADVFDGGPRWKELDTPEGETFAWDPASTYVRKLPIFDGMKAEPEPVGDITGARVLL KLGDSVTTDHISPAGNIKSDSPAGQWLAGNGVECRDFNSYGSRRGNHEVMMRGTFANIRL RNQLASGTEGGFTRDFTKADGPVTTVYDASVNYREQGIPLVVLGGKEYGSGSSRDWAAKG TQLLGVKAVIAESYERIHRSNLIGMGVLPLQFPEGQSAASLGLTGEETFEITGVDKINEM IPEAVHVKAVNDEVVEFDAVVRIDTPGERLYYLNGGILQYVLRNMARS >gi|302034473|gb|GL383162.1| GENE 249 247256 - 248437 630 393 aa, chain - ## HITS:1 COG:Rv2689c KEGG:ns NR:ns ## COG: Rv2689c COG2265 # Protein_GI_number: 15609826 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Mycobacterium tuberculosis H37Rv # 15 393 13 405 405 191 35.0 2e-48 MHESVGASQGDEFDLGMGNIAHGGYCVARLDGRVVFVRGALPGEEVRVRLTDISKASHWF GQAVDVISADSHRVVPPCPVAGECGGCDFQHVDVEFQRELKRRVVAEQLSRLAGIKWAGT VEAVTGSSDGLGWRTRMQYRSLNQRPALRRHRSHDLVQVPEGGCPIAHPAGRPAAETACN TAEHAIVMVTSCLSEDPEVSVIADGQLVAGGETMTARVGQRRWKVGAGGFWQVHPGAAEA LADAVIGSLEPQQGDEALDLYCGVGLFAGLLADRGVRVRGVEVSRQAVALARRNVPGGRF TAGRVERVLPRMAPKANIVVLDPPRKGAGKTVVQAVARTSPRAIAHVACDPAALARDLHL FDVNGYLPRSIRAFDVFPMTHHVEAVAILEPKI >gi|302034473|gb|GL383162.1| GENE 250 248468 - 250492 1299 674 aa, chain - ## HITS:1 COG:MT2764 KEGG:ns NR:ns ## COG: MT2764 COG0531 # Protein_GI_number: 15842228 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Mycobacterium tuberculosis CDC1551 # 2 648 3 642 657 644 56.0 0 MKVFQAVKRVLIGRKLESSALGETLLPKRIALPVFASDALSSVAYAPDEILITLSLAGTA GFAFSWKIGIAVALVMLIVVMSYRQTVHAYPSGGGDYEVATANLSPRFGLVVASALLVDY VLTVAVSVSSGVQNAEAMIPGLAGHEGVAAAVVIAILTAMNLRGVRESGTFFAVPTYAFM ISVICMVVWGLTRIFVLGDNLRAPTADFTVVGAPKYTGLVGVAFVVLMARTFSSGCAALT GVEAISNGVPSFREPKSKNAATTLAMLGGIAVSMLMGILVLASVTGVKMFDETGESHLVD THGHAVKEQVTVVGQLARTVFYDSFKPGFYIMIVCTMIILFLAANTAFNGFPVLGSILAR DGFLPRRLHARGDRLAYSNGILTLATGAIILVLVFNASVTALIQLYVVGVFISFTVSQTG MMRHWTRLLRTDTSAGTKERRRWQHSRIINGIGLVGTGIVLIIILASKFIHGAYLALIAM AVVYVLMTSIKKHYDSVARELELNSPSDRALPSRVHAVIMISDLNKPTMRAIQFAKATVP TFLEAVIVDVDSDATERLLERWDEEDIDIPLRIIASPYREITNPLIDHIRRIRSENPRDM VEVFIPEYVVGHWWEHLLHNQTALVARARLHFMPGVLISSVPYQLRSSAILEKRWKRNDP RSWRDPGATITPRR >gi|302034473|gb|GL383162.1| GENE 251 250676 - 251338 543 220 aa, chain + ## HITS:1 COG:MT2765 KEGG:ns NR:ns ## COG: MT2765 COG0569 # Protein_GI_number: 15842229 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transport systems, NAD-binding component # Organism: Mycobacterium tuberculosis CDC1551 # 1 217 1 217 227 215 52.0 5e-56 MHIIIMGCGRVGSSLAILLEKRGHDVSVIDIDDNSFRRLGPDFKGRTVKGVGFDRSVLEK AGIREADGFAAVSSGDNSNVLSARVVREEFGIDNVVARIYDQGRAEVYERLGIPTVATVR WAADQVLRSLMPEGSEPAWRDPSGQVRLIRVNTHTDWVGMKISAIQERIYTPLPFLLRFG QGMVPDGATLLQDGDVVYAAVEVERITEIEGLLAKPPVKR >gi|302034473|gb|GL383162.1| GENE 252 251379 - 252038 338 219 aa, chain + ## HITS:1 COG:MT2766 KEGG:ns NR:ns ## COG: MT2766 COG0569 # Protein_GI_number: 15842230 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transport systems, NAD-binding component # Organism: Mycobacterium tuberculosis CDC1551 # 13 218 13 218 220 222 55.0 4e-58 MRIVIVGAGNVGRSIARELTAHGHQILLIDKNPKAMKPDTVPEAEWLCADACELATLEEA RIDNCDIAISATGDDKVNLVHSLLAKTEFGVPRTVARVNHPGNEWMFDQVWGVDVAVSTP RLMAALVEEAVTVGELVRLFTFQKGRANLVELTLPDNSPRVGDRIRDISMPGDAVLVAII RDGQGRAPEREAALEAGDELLFMISPNYEPDLVDLLAPR >gi|302034473|gb|GL383162.1| GENE 253 252119 - 252511 334 130 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4116 NR:ns ## KEGG: HMPREF0675_4116 # Name: not_defined # Def: nucleic acid-binding domain protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 130 1 130 130 223 100.0 2e-57 MVRGTDARAHRESKLRRVLHRVTASNEALADDDLQRSSLDAGASTIAEAKLRTRASLQGR IEVLTLNPRGSNRWLEAELRDGTGAVTLIWMGRRRIPGLRAGRHVNVEGMITEADGHRVI YNPRYTILPD >gi|302034473|gb|GL383162.1| GENE 254 252514 - 253248 833 244 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4115 NR:ns ## KEGG: HMPREF0675_4115 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 244 1 244 244 424 100.0 1e-117 MFGRKKRNDDVETDEVIDEDFETTEEAPDDLDAKEAPEEDESSEEEDTSAYRINLDREDG PFDIDEVDLDADDVERIDFGSLIVTPFENMQMQIQLDQTSGAVQSLLVVQGNSAIEIALF AAPASTLMIDEVHEEMVRGTEAQGGEANVGPGPMGAELRRIVPMKGPDGEDGYHVSRTWL AQGPRWLLRGVLMGESALGEKLDATGQLLLEFFCNLVVHRDDSPRVPGDVIPLRVPEGLR PEES >gi|302034473|gb|GL383162.1| GENE 255 253292 - 253750 426 152 aa, chain - ## HITS:1 COG:Cgl1859 KEGG:ns NR:ns ## COG: Cgl1859 COG0756 # Protein_GI_number: 19553109 # Func_class: F Nucleotide transport and metabolism # Function: dUTPase # Organism: Corynebacterium glutamicum # 15 146 18 149 149 140 59.0 8e-34 MADVVVPTVAVPEAMPRYAMPGDAGADLTCRHDVDLAPGERAMVETGVRVALPDGYVGFV NPRSGLAARHGLSIVNAPGTIDSGYRGQINVLLVNTDPREPVHLDAGSRIAQLVVVPVAE AIFEPVEDLDDTERGQGGYGSTGVSAMPPVDG >gi|302034473|gb|GL383162.1| GENE 256 253743 - 254273 220 176 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4113 NR:ns ## KEGG: HMPREF0675_4113 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 176 2 177 177 268 100.0 8e-71 MVNFPSGSVVYSERLWAPLSWWLIGAAVALSLIVAIGAWTSLATGGIVAVIVVVVVVAAF IKAGSVRIVVTEEGFGVGRSWIEWHWVDRVRGMDAQTMNSVMRSSHQVGSFLVTRPWIRS GLVLRLADPADPHQAWIVSTRRPGKLAAIVGEYIVVPGSPSSSENLSENSMEDNHG >gi|302034473|gb|GL383162.1| GENE 257 254315 - 254614 300 99 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4112 NR:ns ## KEGG: HMPREF0675_4112 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 99 1 99 99 190 100.0 2e-47 MIPEKILWKVYAGALGAVTTIVSQKVVEGVWKYVTGDEETPQPDDPEISTTKALSWALAS GIGIAGSQLLMHRFVNKRWMKFSAVNPITGKNLNAEDDD >gi|302034473|gb|GL383162.1| GENE 258 254684 - 254980 308 98 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4111 NR:ns ## KEGG: HMPREF0675_4111 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 98 1 98 98 163 100.0 2e-39 MATDYDAPRKTDEEVSEDSIEELKNQRNDKNSGKVDEDEVEAAETFELPGADLSHEELTV RVLPRQSGEFTCASCFLVKGRSQLAEERDGQFYCVDCV >gi|302034473|gb|GL383162.1| GENE 259 255189 - 256268 624 359 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4110 NR:ns ## KEGG: HMPREF0675_4110 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 359 1 359 359 532 100.0 1e-150 MDSALSPREIQSRIRSGATVEEVAVEAGVGVDQVEPFAVPVLAELDHIIEVAMTCPVRRA GAPGSHRTLGTVISRVAKANSIPEATISWRSWRHEDRTWALEARWPASTEGAPHSATFRF DLKGRHTSPEDAGARWLVNDRSPAPAEPLPEGASDPDQEPTLDLNDELAIVRAVSNRQSQ TADPEAVAGMTKHDGVYDFDTSSPADTDMLYEMLAGFQEDSVNIYEGLATPVLDAASHPE VNQDPEPATPQAPQPAGAPHAIETSQPDQAGGKSEAQPPHDDTSAQDTAASKLRTSTKKT STSTSRSQASAQAADETPQQDALVEEGSRPRKKRKPRKSKRASIPSWDEIMFGGPTPHT >gi|302034473|gb|GL383162.1| GENE 260 256326 - 256976 528 216 aa, chain - ## HITS:1 COG:PM1236 KEGG:ns NR:ns ## COG: PM1236 COG1435 # Protein_GI_number: 15603101 # Func_class: F Nucleotide transport and metabolism # Function: Thymidine kinase # Organism: Pasteurella multocida # 1 195 1 190 192 123 38.0 2e-28 MAELVFHTGPMDSGKSTLALQMDHAQSAHDRQGVRYAMHDRSGGARITSRIGLSVEAVEV TDSLDLYQDIVSRLSRGGRIDYLICDEAQFYRTKQIDQLARVVDDLDIDVYCFGILADFR TELFPGSKRLVELADRVVEPPVSPLCWCGRPATHNARIVDGKLVREGDQVGVGDIGGGSE IHYEVLCRRHHRQGITGEISRATLSEQTLPFDGSRS >gi|302034473|gb|GL383162.1| GENE 261 256979 - 258106 495 375 aa, chain - ## HITS:1 COG:TM1581 KEGG:ns NR:ns ## COG: TM1581 COG1524 # Protein_GI_number: 15644329 # Func_class: R General function prediction only # Function: Uncharacterized proteins of the AP superfamily # Organism: Thermotoga maritima # 81 369 84 376 381 83 26.0 7e-16 MSSLLAADLMPPGPGTLSDLVPAMGQALTGGGPAGLGLPDATRYVFLLVDGMGQENLEHF RHLAPTLSEMKNCHDLTCYVPSTTATSLSCIGTGAVPGCHGVVGYTFRAPSGRVMNALSW VNGDDPEVIQPHPTAFESLVAAGVTVSSIGPARFQRSGLTRASLRGPRFIPIRDEDDVDE RVYKTLKASRSGDASLTYVYERSLDHVGHGEGWQSAAWRSRLMWVDELVGALLDELDPGT ALVVTADHGMVDIPDDHRVMVEDEGGLLADVALLAGEPRFRHIYTRRPDEVAQRWRRVLG DRAQVVIGDDAVAADLFGPVDVSTRSRFGDVLAITRGDWAIMSRATPKELTLVGMHGSLT PCEMRIPLLAQICEG >gi|302034473|gb|GL383162.1| GENE 262 258103 - 258843 282 246 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4106 NR:ns ## KEGG: HMPREF0675_4106 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 246 1 246 246 467 99.0 1e-130 MTHGTQPRLRSVVLRRLWTASSTRAPMNGRFDMSWRLLDQASSWDDGPVSQSADQARVPL PAALAAEIQSCGFFPELVIDLAETSLAGDEVLDHLLHLEATFDNDEVHRHLTLILRTATR MLIGHTDERAEGGQLQAITSSESIPLSHVSSVVLTRVVQHPDRFGTDPASTTVEAWLQMT WGAVSRLELEPATCGDPMCTANHGYTGTFSGDDIVIRMSPAADGADQVERLMGFATRMQA VTGAAR >gi|302034473|gb|GL383162.1| GENE 263 258746 - 259840 526 364 aa, chain + ## HITS:1 COG:Cgl2204 KEGG:ns NR:ns ## COG: Cgl2204 COG4850 # Protein_GI_number: 19553454 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 25 324 24 312 344 287 47.0 3e-77 MSNRPFIGARVEDAVHKRLNTTLRRRGWVPCVIGYRSYGSATHLRVLGRVILTSPPGRNP EQKRQPDRSPLTRRNLLSIELLSQRGWRNFVGLPAPGAEVVVDVNGEKITVRADRAGYVD VRIKNHGLQPGWHEVTLSTSGDTTTAKVLVVSRNTRFGIISDIDDTVISTSLPRSLIAAW NSFVLTEQARKSIPGMARMYQKLLERHPDAPVVYVSTGAWNTYPFLVRFLARHGYPQGPL LLTDWGPTNTGWFRSGVDHKRTALRELARDFPDIEWVLVGDDGQHDIRIYSEFDELQPGH TRAIAIRELSTTQQVLAHGTTTVLEDRHRVQWTPESAPLVRAPDGDQLAPLLDKVLNHED PPQP >gi|302034473|gb|GL383162.1| GENE 264 259904 - 262438 2048 844 aa, chain + ## HITS:1 COG:SPy1152 KEGG:ns NR:ns ## COG: SPy1152 COG0188 # Protein_GI_number: 15675129 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Streptococcus pyogenes M1 GAS # 13 795 5 786 828 517 38.0 1e-146 MTKKTVDDDFTENIIDVDVSREMENSFLEYAYSVIYSRALPDARDGLKPVQRRILYTMGD MGVRPDRPHVKSARVVGQVMGQLHPHGDAAIYDALVRTAQPWAMRLPLVDGHGNFGSLDA GPAAMRYTECRMAPPALTMIDGLDEDTVDFEPNYDGKETEPSVLPAAFPNLLVNGASGIA VGMATNIPPHNLVEVVAALRHMLDHPNADLDEIMRFVPGPDLPTGGRIIGLDGIADAYCT GRGSFKIRATARIEKVSPRRRGIVVTELPYMVGPERIIDQIKTLVQSKKITGIADVKDLT DLTNGTRLVIEVKNGINPEALLERLYKLTKLEDSFAINAVSLVEGQPRTLGLLEMLQVYL DHRLDVTLRRTKFQLNKAQDRLHLVEGLLLAIVDIDDVIAIIRSSEDAAAARTRLMGTFD LDEVQANYILDMQLRRLTKFSTIELESERDELRERIEGLTLIVNDKAELRRVVSGELVEV SSKYGTPRRTVLLGAAPSVAAASAPLEVPDDPCWVLLSATGLLARIDTADGLPSDGDRAT HDVIISSARTTARGDFGIITSAGRLVRVHAVELASLPITATAPSVAGGTPLADLVGLEKG ERALAVTSLSGAGPSLALGTRNGIVKRVNPELLGKESWEVIGLKNGDEVVGAVEMGDEDL ELCFVTQGAALLHFPASAVRPQGRSGGGVAGIKAKDPVIFFGAAPRRGSSVVTVAASSPA AAGKEPGSIKLTPFDQYPPKGRATGGMRCQRFLKGETALVFAWIGPDPAVACAASGVPIE LPAPNMRRDGSGDQGRQPILAVGSRRHGSNKGNPVSDGSNDALDSGDPLSTNEKQIDSQP ELFS >gi|302034473|gb|GL383162.1| GENE 265 262477 - 262620 66 47 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4104 NR:ns ## KEGG: HMPREF0675_4104 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 4 47 1 44 44 77 100.0 1e-13 MLAMPNPLTQQTRPDWLLEESDPICSASTGSSSKYNVTTHVNRVAEG >gi|302034473|gb|GL383162.1| GENE 266 262617 - 263960 1008 447 aa, chain - ## HITS:1 COG:Cgl2562 KEGG:ns NR:ns ## COG: Cgl2562 COG2270 # Protein_GI_number: 19553812 # Func_class: R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Corynebacterium glutamicum # 14 429 18 427 440 272 38.0 1e-72 MSHTDVPADQRKRVFAWAMWDPGTQPFASVITTFVFAVYLVGDAFGSKDRTVTALSWTMT LAGLTIALLAPVVGQWAGRRGRQVTALKWLTWTLAVMSGLLFFVKPHPSYLVFGLVLLGI GTVISDVGSSLYNGMLDDVAESGKVGRISGLGWGMGYLGGIIALLVIYIAWIKPKVGWFG VTNHEGMNIRVAMLFCAVWILALTLPTFCVLRDNPRPIESSEPRPHGLRALGHSYAELWR SVVRIWHVSRNTIIFLIASALFRDGLNGVFQFGGPLARQTFGFSASGVLIFGIVANLIAG ISTILLGRLDDRIGPKRLIIFSLIVLSACGMGVFIGHAGSAMVFWVLGLIMCGFVGPAQS ASRSLLTQICPPGYQGEVFGLYATTGKAFSFLAPALFGLFVTVGHAITGGDNNQYWGIMG IVLVLLAGLAATIPVSTAEIRGKTHTN >gi|302034473|gb|GL383162.1| GENE 267 264013 - 265311 1009 432 aa, chain - ## HITS:1 COG:VC2699 KEGG:ns NR:ns ## COG: VC2699 COG2704 # Protein_GI_number: 15642694 # Func_class: R General function prediction only # Function: Anaerobic C4-dicarboxylate transporter # Organism: Vibrio cholerae # 41 431 64 451 451 325 50.0 2e-88 MAIIFIIIGSRLGGVGVGLAGGAGCIVLVATGLHTKVAEDIPWTVIGIIMTVICAIAALQ LAGGMDYLVHLAEVMLRKHPNQINYLAPLTTFLLSLLCGTGHTAYSVLPVIVEVAKEHKI RPSRPLSIAVVASQVAVASSPISAATLALVGVLEPLGVGYLEILAVTIPTTFIGCAVGAV VASRQGKDLIDDPIYQEREAKGLVSHNAAVADTGWRPKRTAIPSLVAFLVALVVVVGYAT VSSEEVGVLTKPPMTSSAAIMLIMLTTAMIICMMSREDVKQLTTQTTFRAGMSAAICILG LAWLGNMFVNNYMDVLTHAGASILHSAPWFLSVILYLAAPLMFSHAATTVAFMPVVAKIG LSPMVMLACYPAVANYYLLPNYPTTVAAMEMDDTGSTRVGRIVLNHPFVLPGTVSIAVTV LLGAFWAPIVLG >gi|302034473|gb|GL383162.1| GENE 268 265677 - 267773 2100 698 aa, chain - ## HITS:1 COG:TM0833 KEGG:ns NR:ns ## COG: TM0833 COG0187 # Protein_GI_number: 15643596 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Thermotoga maritima # 9 691 3 631 636 496 43.0 1e-140 MRTASTSREYGAKNLLVLEGLEAVRKRPAMYIGSTDTRGLMHCLWEIFDNGVDEALAGYG RRITVTLEKAGSILVTDEGRGIPVDVEPRTGLSGLEVVYTKLHAGGKFGGGAYNVSGGLH GVGASVVNAVSVRLDVEVDRKSTVWGMSFRRGVPGVFEGEGPDAPFTPGSGVRKVGKAKR GVTGTRVRYWPDRQIFLPDAKLSWSKLADRARQTAFLVPGLEIVITDERGIQTDPETGDV LETVSETMRFDGGISEFAEYLATDQPVNNVMRLQGETSFTETVPMLDENGGMTPTDVDRD LGVDIALRWGTGYDTTVRSFVNIIATPKGGTHVQGFEQGLLRAFSAGLEGTRILKSSEEI VKDDVLEGMTAVVTVSLAEPQFEGQTKEVLGTPPVRRLVARIVEDKMTAFLTSAKAADKP VARALMEKVVNASRTRVAARAHKENQRRKNALESSHLPPKLKDCRSSDPDVTELFIVEGD SALGTANVARNSEHQALLPIRGKILNVQKADLGAMLKNAECASIIQVVGAGSGKTFDLDQ ARYGKVIFMADADSDGAHIRCLLATLFFRYMRPMVEAGRVFSAVPPLHRFELINPKRGMD KYLYTYTDAEYQRTAAQLAKKGVRFKEPQRYKGLGEMDASQLKETTMDPRHRTLRRITVD DAAEAEGTFEILMGNEVAPRKQFIVEGAYRLDAEQIDA >gi|302034473|gb|GL383162.1| GENE 269 267652 - 267945 79 97 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|289427247|ref|ZP_06428963.1| ## NR: gi|289427247|ref|ZP_06428963.1| conserved hypothetical protein [Propionibacterium acnes J165] conserved hypothetical protein [Propionibacterium acnes J165] # 59 97 1 39 39 62 97.0 8e-09 MRPRVSVDPMYMAGRLRTASSPSNTNKFLAPYSRLVDAVRTVSPLPRGVSELLADEVEML SMVTVAAYRQPTTRNPGTVFAPSHPSFDTYGNIPTIA >gi|302034473|gb|GL383162.1| GENE 270 267966 - 268196 271 76 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4100 NR:ns ## KEGG: HMPREF0675_4100 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 76 1 76 76 129 100.0 3e-29 MIQMEEVVMSTTMIEHQALTTADRCDRCGAQAYVRITLRNGGELLFCAHHARAHEDKLKQ VALHIQDDTTKLSSHV >gi|302034473|gb|GL383162.1| GENE 271 268273 - 268854 460 193 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4099 NR:ns ## KEGG: HMPREF0675_4099 # Name: not_defined # Def: acetyltransferase, GNAT family # Organism: P.acnes_SK137 # Pathway: not_defined # 1 193 1 193 193 380 100.0 1e-104 MDTSVNVDTSSRPAHEPATAPGRFVVRDACHEDLPEAAAVQAVCVREIGQGVIPNDVLTE VTGPGIVHTTIEQWNHFMDDGAIFKILVDRLDMRTVGVAMARVSTSSDAPTPWEIATLHV LPEARNCGASDNLLDACIGNRSAYVWVFADNARAISFYQRHGFHVDAADGAVDDSLGGVE LQRLIREDIIESQ >gi|302034473|gb|GL383162.1| GENE 272 268974 - 270248 1398 424 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4098 NR:ns ## KEGG: HMPREF0675_4098 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 424 1 424 424 853 100.0 0 MSISKDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPNYHGRRYEMGA IMGVPSYDTIQEIMDRTGDKVDGPKLRREFLHEDGEIYVPEKDPVRGPQVMAAVQKLGQL LATKYQGYDANGHYNKVHEDLMLPFDEFLALNGCEAARDLWINPFTAFGYGHFDNVPAAY VLKYLDFVTMMSFAKGDLWTWADGTQAMFEHLNATLEHPAERNVDITRITREDGKVHIHT TDWDRESDVLVLTVPLEKFLDYSDADDDEREYFSKIIHQQYMVDACLVKEYPTISGYVPD NMRPERLGHVMVYYHRWADDPHQIITTYLLRNHPDYADKTQEECRQMVLDDMETFGHPVE KIIEEQTWYYFPHVSSEDYKAGWYEKVEGMQGRRNTFYAGEIMSFGNFDEVCHYSKDLVT RFFV >gi|302034473|gb|GL383162.1| GENE 273 270326 - 270619 207 97 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4097 NR:ns ## KEGG: HMPREF0675_4097 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 97 1 97 97 155 100.0 6e-37 MGKSYGTDDDLQYRVPYPEIRWSRDFPRVASERASFTEDPNWPPAPGEEYHADIEGNNAR NGWTEDTPAANDAEAERRAKELAAHLDEMARGRRTAR >gi|302034473|gb|GL383162.1| GENE 274 270597 - 271379 593 260 aa, chain - ## HITS:1 COG:no KEGG:PPA1037 NR:ns ## KEGG: PPA1037 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 260 1 260 260 512 100.0 1e-144 MSITPRKCKAAALATAPVAAALGAYGFLKGATKFYSSQVNGTPEQYKMTLPGDDLVPEGS PRFKRLTHVEDLDAPCDEVWKHVYQLNTTTAGFYSFTFFEKMFGLSVDNTFMVEQAWQAP DYYKPGDMFCWSYAGFGAEVADMVPGKYLVWFADTRDGTRTPGASFLLPPGMPWNRWSWV IALEPLDSGNRTRIYSRWNISASEESSPISVFLMDLVMMDGGGMMNRRMFQGLEKAAVGT ARKNIVPARLSAVHGQVLRH >gi|302034473|gb|GL383162.1| GENE 275 271519 - 271767 238 82 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4095 NR:ns ## KEGG: HMPREF0675_4095 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 82 1 82 82 162 98.0 4e-39 MHLDEPTPLELESLYVRSRLYGTGLGQALMNTVIGDSRAYVMVYPDNTQAKAFYRRNGFS PDGPLDDYRDEDPAYVLECWIR >gi|302034473|gb|GL383162.1| GENE 276 271792 - 271944 56 50 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4094 NR:ns ## KEGG: HMPREF0675_4094 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 12 50 1 39 39 71 100.0 1e-11 MVDRIFAQEGPMAIRIRQVATGDRPAVARMSHGEYVWLAVDTESVVDGLL >gi|302034473|gb|GL383162.1| GENE 277 271910 - 273106 784 398 aa, chain + ## HITS:1 COG:MT0230 KEGG:ns NR:ns ## COG: MT0230 COG0657 # Protein_GI_number: 15839600 # Func_class: I Lipid transport and metabolism # Function: Esterase/lipase # Organism: Mycobacterium tuberculosis CDC1551 # 148 375 135 370 403 73 26.0 7e-13 MGPSCAKILSTMSREYGGRVADTKTSRHSWLRITSGLVGLILTLPVLAWSVAAILPSHNA LTFISSVLVGSLAVPALVIAVIAFVLALLGRGGLRVVAVVFSVMALIVPVAATATTAWIT DRAGGRINVVSAAAVSSMSDHPDETVRYGSGPDETAQIYRAHNHNAPVLVDIHGGGWSTD ATMPATLRWFSDHGWLVIRPSYTLATQGHPTWNTAPKQVACAWAWSLSHVKELGGDPSQV SIMGDSAGGGMAINLAYGAASGKLKSSCGSIRAPKSVLALYPTVDVGTVESVTTLSAGNA AKMYIGGTPKQFPDRYRAVNSSTWITPQAPPTMVIQGNHDTFVPPSSVRKFVNRARQAGV RVDHVQLPMLNHAFDSQARNSLGFQVVTSLGQRFLTDH >gi|302034473|gb|GL383162.1| GENE 278 273050 - 273658 366 202 aa, chain - ## HITS:1 COG:no KEGG:PPA1034 NR:ns ## KEGG: PPA1034 # Name: not_defined # Def: transcriptional regulator # Organism: P.acnes # Pathway: not_defined # 1 202 1 202 202 361 100.0 1e-98 MAVTTKSLTRRGPYAKGVARRAEILDVALRLYGASSGERPTLAAIAAEVGLTEAGVLHYF GSMDELFVAILEARDAHAVDAGGLTDPDHVWAYLAQTTRTPGLTKLFVDMSVAAADPYHP AHTFMERHRQRVHDVVRMALGIDDEQAIRLVVAAAEGLQMRWIQNQATDIAGDLEALARV LTTRSVVSKETLPKARDDLESQ >gi|302034473|gb|GL383162.1| GENE 279 273764 - 276337 1288 857 aa, chain + ## HITS:1 COG:TM1624 KEGG:ns NR:ns ## COG: TM1624 COG3250 # Protein_GI_number: 15644372 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase/beta-glucuronidase # Organism: Thermotoga maritima # 29 827 22 763 785 295 29.0 3e-79 MSAPFQLTSSDPSVIDPVGLAADTHEWIEAVVPGGVHETLIAAGIIAHPYVEDHEKDCRW VEDRAWWYRGTVPIPAGDDPLVLTLTGVDTVADIWVNGHHVGRHANQYRPFQVTLPPIDA NKAKVLIRFAPPLDGLAEPPATRAMVNAVSDFLNAAAPQNLDAEPGSGILTLDLAATRRR KGMFSWGWDFAPRIPSIGLTGPVELTRRSPIEVSHHVDTMAIGDGDSADVNVVVSTVHHD GPAPCTVDVTLTSPDGDRVSGHAQFKHGSATVDLQLDNPQLWWTHDLGKPSLYQVDIKIC DKDANTIATDSGMAGIRTIEVDCSPDTDDPEIDGPARHFTFIINGVPVFARGANLVPQSM LPGSVTPQQDHDLVRACRDANMTMVRVWGGGVYASDAFMTACDEYGILVWHDFMFACIDY PGDDEEFMSEVRTEADYQTRRLANHPSLALWAGGNEVQAMHQAVWNNLNPGPWGSEIFDE VLPEAVRRNSPTVNYWANSPATDVDTDPRVNGTRAGDRHAWEVWHGADVGAGTHEDYSSP AEAMHYHRYSYDTGRFISEFGIHASADLPALGRWLGNDHLNLDDPILLARNKDTPKAKGM ALIDYEVGKPTSVQSYVTYSQVVQAEGLKFGIEHYRRRWPHCAGALVWQLNEPWPGMTWS LLDHDLGAKPGYYATARAFAPALSILRLTDDSLEVWVSNARPTRVTDTVTVTIEGFDGSI DQTHRVKVSVPASTSQMVWSVPRAQIPVNGSHYIWVEGSVLPANRLFLTRIGDLNLPEAH LDVKVDVTEPTTATVTVATTTFAYFVRVLTPWPGARPDISALDLRPGTKAVVTVTGLPEG FDPDEITVRHFLDDVDR >gi|302034473|gb|GL383162.1| GENE 280 276410 - 277930 1608 506 aa, chain - ## HITS:1 COG:MT2777 KEGG:ns NR:ns ## COG: MT2777 COG0568 # Protein_GI_number: 15842241 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Mycobacterium tuberculosis CDC1551 # 6 506 3 528 528 434 55.0 1e-121 MSTTTSSTANTAADEEAKIATARKSTRSTSAKTGTTGRAKKTTATKASQSSAHKSAGGAK TPTAKSSGAKTTTKPTSTKTAAKSTKTAASKTTKSSGTKTVGNASSGGAKKSTTKRRTTK AKKETTVAEAASGEVDVTVERDGDDVVLTIGGKKRSLDDVDERDYDPAEAAKDEQQINKE TEAFSLSDNDDADEPEQTVMVAGATADPVKDYLKQIGKVALLNAVEEVDLAKRIEAGLFA GEQLADPDAKIREKDREDYEWIAEDGKVAKNHLLEANLRLVVSLAKRYTGRGMLFLDLIQ EGNLGLIRAVEKFDYTKGYKFSTYATWWIKQAITRAMADQARTIRIPVHMVEVINKLARV QRQMLQDLGREPTPEELASELDMTAEKVIEVQKYGREPISLHTPLGEDGDSEFGDLIEDS EAIVPADAVNFTLLQEQLHDVLDTLSEREAGVVSMRFGLTDGQPKTLDEIGKVYGVTRER IRQIESKTMSKLRHPSRSQVLRDYLD >gi|302034473|gb|GL383162.1| GENE 281 277836 - 278060 97 74 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQGLDASWASYALGSHGAVIVDLLWAHLEGTALKDWSVLGEDTRVDHHVQHCKHRCRRGG EDSHREEEYTFHLC >gi|302034473|gb|GL383162.1| GENE 282 278278 - 279216 989 312 aa, chain + ## HITS:1 COG:Cgl1873 KEGG:ns NR:ns ## COG: Cgl1873 COG0568 # Protein_GI_number: 19553123 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Corynebacterium glutamicum # 1 309 16 324 331 251 46.0 9e-67 MDTKSRVRTTDGIDGKDAVGLYLDGIARTPLLNAAEEVALARRIEAGVFARAILEGHAET TSDTTTKELHQIAADGDEALAHFVRANLRLVVSVARKYGRSQMPLLDLVQEGNTGLIRAV EKFDYAKGFKFSTYATWWVRQAISRGIAQQGRIVRLPVHVAEQVNQVSAARRNLERQLGR EPETFEIADELEITEERVIELIRFGRDHVSLDAPVEDDGDTSLGDLIARETSPGPDDIVL DAEDRSRLEGLLDDLDERSADVVRRRYGLVDGRQAKLADIGKVWGITAERVRQIERAALA SMRQRNLATMAA >gi|302034473|gb|GL383162.1| GENE 283 279273 - 280169 447 298 aa, chain - ## HITS:1 COG:BMEI0166 KEGG:ns NR:ns ## COG: BMEI0166 COG1946 # Protein_GI_number: 17986450 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA thioesterase # Organism: Brucella melitensis # 7 284 17 299 300 231 44.0 2e-60 MPSTTAELLDLLDLEDLDLDLFRGRQPHTTWQRTFGGQVLAQALVAGARTIPERTAHSMH ALFLHAGRTDLPMIFDVERIRDGRTFSTRRVNARQHGRTIFTAELSFKNREDGPEHSDPM PDCLPDPDRCPTLAQALEQMFGRPMPTVKEWDALDVRLAGDGSQLVDPNHVTHLSLWVRT TASLPDDRVVQRAILAYISDISLMAGAVMPHLGSVPSGMVVNPASLDHAMWFHRTAEADC WMLYDQVSPSASGLLGFSMGRLMQDGKLIASCCQEGVMRLVDVNDLDASVTFPLGRGT >gi|302034473|gb|GL383162.1| GENE 284 280333 - 284418 3064 1361 aa, chain - ## HITS:1 COG:VC1382 KEGG:ns NR:ns ## COG: VC1382 COG1643 # Protein_GI_number: 15641394 # Func_class: L Replication, recombination and repair # Function: HrpA-like helicases # Organism: Vibrio cholerae # 22 1357 87 1306 1309 1063 45.0 0 MPNSRLEGELPGGGVVTFDTDLPIAAHADEIADLIKHHQVVVVAGETGSGKTTQLPKICL ALGRRQIAHTQPRRIAARSVAERVAEEMGVELGEQVGYQVRFTRRASSDTALTVMTDGVL LAEISHDRDLCAHDTIIIDEAHERSLNIDFLLGYLKQLLPRRPDLKVIITSATIDTARFS AHFDDAPVIEVSGRTYPVEVRYRPLDPSEQIRPDDEDDIDDEDELLHRPSAPSLTSPDDE VVDQVTGICRAVQELCREESGDILVFLAGEQEIRETAEALADLNLSNTEVLPLFARLSAA EQHRVFTPHTGRRIVLATNVAETSLTVPGIRYVIDPGTARISRYSVRTKVQCLPIEPVSQ ASANQRAGRCGRVAPGICIRLYSQTSFESRPEFTEPEILRTNLAAVILQMAQARLGAITD FPFVEAPDRSRINDGIRLLDELGALKPGHRDAPRLTKIGHQLARVPLDPRLGRMLLEGAR QGSLAEVLVIVAALSIRDVRERPADKREEADAFHRRFATEANLLQTLQAADNTDNNQVGD WSQVRRQHIHQEAANTAKPGPPARHTPHTRGKISPRPQAGGIDEGGDIMAIHRLWRYLRH QRRQMGSSAFRRMCRAEYINYLRVREWDDLHGQLRQIAKELHLEVNRTSAPTDRVLVALL SGLLSHIGLVQVRQPAKRHGQRPGPQEYLGARGTKFAINPGSLLARKSPELVVAVELVET SRLWARTVAAVQPEWVKEVAGPLIRRSWAVPHWAASTASVVATERGTLFGVPLWADRRVT YGRIDPVASRQIFIRSALVERNWRSDHGFLKHNDRVRDEAADLEERSRQRGLVADDDAIF AFYDRRIPDGIVSGSHFDAWWRRVQDRHQLDLSIDDLVDSGSVDADAFPDHWKVGNLELP VRYVFEPGSGHDGVTVTIPLALLNQVPTAPFSWQVPGLRTELATELIRALPKRIRTQLVP APDRARAALTWLEDHDADRHAPFTNELGRALRTLTGVIINPDDWNIAAIPAHLRIGFDIT DAEGRPVGKKSKKNGKDKLKGSQPAPIARSEDLDALQTDLAPKVSQSLTKAAGQPQIHGA KEWTFDPIPKRVDLSRKGPDAVGYPCLVDEGDSVGTTVLDTPRAQRTSHASGVVKLLVLN LPDPTKWVVTHMDNATKLALATSPYPSVPALLADARHKAVASVAQEKAGDLSGIRDKKTF DDLALVVRQDQADRMARVVRTAGRILSRVVAARQALATVSDPAIHADIVAQINDLVFENF ISATPDPWYDDMPRWIQGVSVRIESLMTNPSRDPRQMAELEPLLADYDALCEEQPAGKLP AEVEEIGFMLEELRVQYFAQKLGTRVSVSPKRIRMAIAKLS >gi|302034473|gb|GL383162.1| GENE 285 284853 - 285707 584 284 aa, chain - ## HITS:1 COG:Cgl2878 KEGG:ns NR:ns ## COG: Cgl2878 COG0589 # Protein_GI_number: 19554128 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Corynebacterium glutamicum # 14 282 6 292 301 84 29.0 2e-16 MTDDRTSSKAQRTVIIVGVDGSEDGLRAARYAAGSAIKRDADLIVLHAVDDAAVAGAWGV VYDPTALQDAGQVVVDDAIHVATERGMDPDRISGEVVLGNPAAILADRSADAQLVVLGRR ATSGLERMFVGSTSVAVAGMSAAPVVVISRASTPDPTGGKKCVAVAVGPQSVGTAAVGFG FAEADHRGCKLLAVTVPGNDSEEVHDEALKRLNEVVKPLANKHPHVEVETRVLSGEPVDA LVDLSGNVDLLVIGMKKHPILGWTAGGVSRGIMAHAQSPLAICH >gi|302034473|gb|GL383162.1| GENE 286 285791 - 286723 512 310 aa, chain - ## HITS:1 COG:no KEGG:PPA1027 NR:ns ## KEGG: PPA1027 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 310 1 310 310 600 100.0 1e-170 MDEPPDFAFDLDRSTAQAWDQFAERLAEVVSVIDDDGELTISTLSARTDTAPFIRFVQDD PGCSDDTAMILAEASSNNCLPESACLTSGQLDGLRSLGWQAPGTCKVHQTDNYWVYRSQD DSEQLAELTVTTLRDIFGVPHPVFLAPDQLAEILQPEPPLSPTEAASVPAIMPVDKDHLD RLVADELSHMFGHPAIRDSEGDFAIRVGTCMVFVRTTPDASELLLFAALVHDVEGRSRAV EVLNDLNVQSRYGRFALHQDRVFVTMSVMARPFVAAHLHQAVSIMSRLADGLDNELARKL RGRTTFEEGS >gi|302034473|gb|GL383162.1| GENE 287 286884 - 289736 2497 950 aa, chain - ## HITS:1 COG:CAC1047 KEGG:ns NR:ns ## COG: CAC1047 COG0209 # Protein_GI_number: 15894334 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, alpha subunit # Organism: Clostridium acetobutylicum # 15 950 9 987 987 570 33.0 1e-162 MTETKSAPRRTSRSKGLHVERIFSTEGVHPYDEVTWERRDVVQTNWRTGDVVFEQRGVEF PDFWSVNASTIVTNKYFRGALGTPAREDSLKTLIDRVVNTYVTTGRKNGYFASDDDAKVF GEELTWLLVHQYFSFNSPVWFNVGTTSPQQVSACFILSVDDSMESILNWYREEGFIFKGG SGAGLNISRIRSSKELLSSGGTASGPVSFMRGADASAGTIKSGGATRRAAKMVVLDIDHP DIEEFIETKAREEDKIRALRDAGFDMDLGGRDIVSVQYQNANNSVRVSDAFMAAVEQGKP FGLMSRTEPDKVLDTVDAKELFGKIAQAAWECADPGLQYDDTINAWHTTPNSGRINASNP CSEYMSLDNSSCNLASLNLLKFLDENDHFDVEKFTRAVELVITAMDISICFADFPTEAIG KTTRNFRQLGIGYANLGALLMALGLGYDSDGGRALAAAITSLMTGVSYRRSAELAAIVGP YGGYSENAEPHQAVMARHRDANRQVHPLHNNDTAVLTAAKAEWDKVVKLGHTNGFRNAQA SVLAPTGTIGFMMDCDTTGIEPDFSLVKFKKMVGGGSMQIVNQTVPRALKNLGYTPEQAE KIVAYIADNGSVVGAPDLDEAHYEVFDCAMGARFIAPMGHVRMMAAVQPFLSGAISKTVN LPESSTVENIAGVYMEGWKLGLKALAVYRDNCKVGQPLSEAKKKEEEEKAEPEVRIEYRP RRQRLPKSRMGRTTSFQVAGAGGYLTTGAYDSGRLGEIFLKLGKQGSTLAGVMDAFSIAV SIGLQYGVPLESFVQKFSNLKFEPAGMTDDPDIRISSSIIDYVFRRLALDYLDFDERAEL GIYTAAERARYVQTGSYLSDEEDELIDSETLKDTPADRVRVHEDGANQPGLFATQEAVEQ IGEAHTSAELLEEQIGREVDAPLCLTCGTKMRPSGSCYVCEGCGSTSGCS >gi|302034473|gb|GL383162.1| GENE 288 289818 - 290324 352 168 aa, chain - ## HITS:1 COG:MT2791 KEGG:ns NR:ns ## COG: MT2791 COG1327 # Protein_GI_number: 15842256 # Func_class: K Transcription # Function: Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains # Organism: Mycobacterium tuberculosis CDC1551 # 1 145 1 145 154 175 63.0 3e-44 MRCPFCQHDDSRVLDSRVCEDGTAIRRRRQCPMCERRFTTIERMQMTVHKRNGIEEPFSR DKVIRGVRNACKGRPVTDADLALLGQRVEDGLRARGVAEIPSEEIGLAILGPLRELDSIA YLRFASVYLNYNTIEDFATEIDRLRDESSDKTKSSSRKRLSKQDEPLF >gi|302034473|gb|GL383162.1| GENE 289 290549 - 291040 162 163 aa, chain - ## HITS:1 COG:no KEGG:PPA1024 NR:ns ## KEGG: PPA1024 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 7 163 1 157 157 286 98.0 2e-76 MVMTANLSVRGNVIDDTGGPLAAGPSPGYLPGPLTGADGSRRQRGDPMSAQTYEWYIETT SSRRGDLVVGPWQDELAEPVVVIDRRELMAGRPSATARRKSLHNRFWDAAVLATIAVVIV GVILALGRLGQMWQGDPASGHEDHMGVVQVDAHQPGAPSDARS >gi|302034473|gb|GL383162.1| GENE 290 291167 - 291841 361 224 aa, chain + ## HITS:1 COG:ML1003 KEGG:ns NR:ns ## COG: ML1003 COG1974 # Protein_GI_number: 15827479 # Func_class: K Transcription; T Signal transduction mechanisms # Function: SOS-response transcriptional repressors (RecA-mediated autopeptidases) # Organism: Mycobacterium leprae # 29 224 24 235 235 67 27.0 2e-11 MITDTPGTDTSDPAAVSSAVPFTNTREPSAKEREVLAAVKEGLRRDGKAPTVRALAEMTG AASTSTVQRRISSLIDLGLLRRTNGTLEVVEETVESSDPHGPQAFQVKLLNPSNEEHDET VIAVPPQLLSHGEHAVIIVRDDGMSPDIHSGDLVVVRRISVSDLPDDPPETYLVAATAGG TTVVRTLSNVSGRRWLLASNPTHSPINLDDASLLGQAVSLLRRL >gi|302034473|gb|GL383162.1| GENE 291 291951 - 294002 1110 683 aa, chain - ## HITS:1 COG:Cgl2468 KEGG:ns NR:ns ## COG: Cgl2468 COG1199 # Protein_GI_number: 19553718 # Func_class: K Transcription; L Replication, recombination and repair # Function: Rad3-related DNA helicases # Organism: Corynebacterium glutamicum # 3 681 10 662 665 529 46.0 1e-150 MGSEPADVSQMCRDLLSTAVSEMGGQERPGQVAMAKAVDQAMRDKLHLLVQAGTGTGKSL GYLAPALVYCVEKGAQVIVATATLALQTQLAYKDIPTILDASEKVLSRRPRVAVLKGRNN HICLHKVRGGSTRTKGQDALVPGADLVVAAADDGREVEAAPESTLGAEVVMLREWAEKQV EESGLGDRDDAPAHTPLAWTQVSVPANECLGVQRCPFGSECLSEAAREQARNADLVVTNH AMLAIDALNGGRVLPEHDTVIIDEAHELVNRFTRAASKDLSPAIVTTTAKRAMTWLDDDV GADLLNQADSMDHALEATVPGRVTTPDAQVIQTCAVLRDLARVAVSQLGRNDEDSREPVD AERAQAQAAMREVFETAECMVRLAAADVVWVSESEKGYRSIHVAPLSVGGLLRENVFAQS TTILTSATLCIGGNFLAIARDVGLSPLEQIEGDAPEILETQMGWRGVDVGSPFDYSKQGI LYVGRSLPRPGRDGIAPEVLDDLAELVWAAGGRTLGLFSSQRNAIAAAEHMRSAMPDIPV LCQGEGHLADLTRRFAADPRTCLFGTVSLWQGVDIPGDTCRLVVIDRIPFPRPDDPLMAA RSKAVEDAGGNGFMTVSAGHAALLLAQGAGRLIRRADDRGVIAVLDPRLVTARYGNFLRA SMPPFWTTTDREMAVGALRRLAE >gi|302034473|gb|GL383162.1| GENE 292 293992 - 295473 618 493 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 [Roseobacter sp. AzwK-3b] # 90 471 26 407 425 242 40 2e-62 MALGREDGYRVSEIEQIDNEREDALKNNNGFSEDQSDYDGDQFDLDARLSLTRVPGMSTD LSDISEVEYRQLRLERVVLCSVWTQGTAADAENAMAELKALAETAGSQVLEAVMQHRTTP DPATYIGSGKVAELAEVVWATGADTVICDGELDAAQLRNLEDRVKVKVVDRTALILDIFA QHARSVEGRTQVELAQLNYLKQRLRGWGGNLSRQTGGRAAGGAGIGGRGPGETRIETDRR RISHRIAVLRRRLTHIESTRASKRADRIRNKVPSVAIVGYTNAGKSSLLNRLTRAGVLVE NALFATLDPTTRRATTSDGRVYTLTDTVGFVRHLPHDLVEAFASTLEETAMADVLLHVVD ADDPDPLGQVDAVRGVLSGIGASNIPEILVLNKIDRLSDETILTLRSTFPGAYLVSAHTG EGIDKLVEAIEAGLPIPSQRVDVVIPYARGDLMDKIHHNGTIGLIDHTADGTHVVAHLHP ALAAEVEEACDGV >gi|302034473|gb|GL383162.1| GENE 293 295528 - 296349 555 273 aa, chain - ## HITS:1 COG:Cgl1898 KEGG:ns NR:ns ## COG: Cgl1898 COG0253 # Protein_GI_number: 19553148 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate epimerase # Organism: Corynebacterium glutamicum # 4 270 7 277 277 190 45.0 3e-48 MTTFWKGHGTGNDFVIVDQQDPLTSAQVRWLCHRRFGIGADGTLQALRAGDVEDWNGDPD LWFMDYRNADGTIAEMCGNGLRVFARYLVQTGRMTTTEADVATRAGVRHVRLHDGGDVSV TMGTVRVESGKVTIEHQDMWWPACKVDVGNPHAVVVTDHTTVCGINLNDSPTWRPRSAFP DGVNVEFVEQIDQHTVAMRVHERGSGETMSCGTGTVAVAATMATRTGHRGPWTVQVPGGR VVVTLSPSDDGYRAILTGPAVILAAGKVDLPNG >gi|302034473|gb|GL383162.1| GENE 294 296354 - 297313 746 319 aa, chain - ## HITS:1 COG:MT2799 KEGG:ns NR:ns ## COG: MT2799 COG0324 # Protein_GI_number: 15842265 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA delta(2)-isopentenylpyrophosphate transferase # Organism: Mycobacterium tuberculosis CDC1551 # 12 304 4 299 314 219 46.0 4e-57 MRKNEYVNLPVICLVGPTASGKSGLAVRVCRRLYVDEHPAEIINTDSMVVYRGMDIGTAT PTLREQRTVVHHLVSILDVTVPSSLVLMQTLARDAVEDCLSRGVIPVLVGGSALYTKAII DEMSIPPTDPEVRARWQEKLDAEGPRVLHDELARRDPKAAESILPGNGRRIVRALEVIDL TGSFTATIPDGTLHWPKTVQMGLELSRKDIDQRIADRVDQMWAYGFVDEVRSLANVGLRE GLTASRALGYRQVLEYLNGDYDEDEARRRTIIGTRRFARKQLMWYRRDDRIEWFNALAPD LDDRVVARVLTALTTDEED >gi|302034473|gb|GL383162.1| GENE 295 297432 - 297632 335 66 aa, chain + ## HITS:1 COG:no KEGG:PPA1018 NR:ns ## KEGG: PPA1018 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 66 1 66 66 73 100.0 3e-12 MGLFDKAKDAISDRQDDIKNQASQHSDQVEQGIDKAGNAVDDKTGGKFSDQIDKGQDALK DKLGDL >gi|302034473|gb|GL383162.1| GENE 296 297783 - 299267 535 494 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227395721|ref|ZP_03879044.1| SSU ribosomal protein S12P methylthiotransferase [Haliangium ochraceum DSM 14365] # 17 453 4 452 461 210 31 9e-53 MPNNTLQHTEAPTYRVVTYGCQMNVHDSERIAGLLEEAGYVPDPRTDTLAPADVVVFNTC AVRENADNRLYGTLGHMAAVKSAHPGMQLAVGGCMAQKDKDTVVARAPWVDVVFGTHNVG SLPVLLKRARHNATAQVEIEESLVTFPSNLPARRDSAYSAWVSISVGCNNTCTFCIVPQL RGKETDRRPGEILSEIRALVNEGVQEITLLGQNVNSYGVQFGDRGAFAKLLRACGNIDGL ERVRFTSPHPAAFTDDVIEAMAETPNVMPSLHMPLQSGSDEVLRRMRRSYRSTKFLGILD RVREAIPHAAITTDIIVGFPGETDKDFAETMRIVEESRFSAAFTFQYSIRPNTPAGVMKD QVPKPVVQERYEQLVELVDDIAWQENKAQVGRAVEVMFAQGEGRKDEATHRVTGRARDNR LVHVSLNPGDDVPRPGDIGEVVITSGHPHHLVADGGLVNLRRTRGGDAWHARQGQVSQGT PTVLGLPTVGVPRH >gi|302034473|gb|GL383162.1| GENE 297 299328 - 300869 1242 513 aa, chain - ## HITS:1 COG:SA1014 KEGG:ns NR:ns ## COG: SA1014 COG1288 # Protein_GI_number: 15926754 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Staphylococcus aureus N315 # 8 513 11 516 518 595 60.0 1e-169 MSSNDAIEARHRLRVPSAFTILFVLTVLAVVCTWFIPAGSYSKMSYAAGSNQLVIVDPNG ATTKHTATQATLDKYGVAMKISEFTSGSITGSVSVPGTYERVASHPAGIGDITNGMVTGT IEAVDIIVFILVLGGLIGVVKASGAFEAGLGRLTARSKGKEFLLVLFVSLFMIVGGTTCG LEEEAVAFYPILAPVFIVMGYDALVVVGSIFLAGSIGTCFSTINPFSSAIGANAAGIRLT EGMTWRVIGLVGGAIAVVLYLAWYSKKVKANPGFSYAWEDREAFAAQWSLGNDGAEIGFD WRRKVILFLFAAAFPIMVWGVMARGWWFPAMASSFLAITIIIMLIAATGTNKLSEKELVD SFSAGSSSLVAVSLIIGLARGINHILNEGLISDTLLYESAKVVSHVSGPVFVLSLLIVFF LLGFIVPSSSGLAVLALPIMAPLGDTAGVSRATVLCAYQWGQYAMLFLAPTGLVMATLQM LDIKYSHWLKFVWPLVVFVLVYGGILLVLQTVV >gi|302034473|gb|GL383162.1| GENE 298 301033 - 301932 524 299 aa, chain + ## HITS:1 COG:ZyihR KEGG:ns NR:ns ## COG: ZyihR COG2017 # Protein_GI_number: 15804465 # Func_class: G Carbohydrate transport and metabolism # Function: Galactose mutarotase and related enzymes # Organism: Escherichia coli O157:H7 EDL933 # 9 298 9 295 300 153 31.0 5e-37 MINDAILPTGTQYEISHGPWQAIVTEQGATLRSLHYEGTDVIKSFDADQSPTSSQGQQLL PWPNRIRDGHYTFDGMEQQLAVSEVDRHNAIHGLVAWSRWSLVEHTDTSVTQTIRIMARP GWPGTISVRLTHRLSDAGLAVEVTARNVGTTAVPFGYAAHPYLCLGGTIDDWTVDAPFTS WLQVDDRLLPMQMREMDSIHTLNGLTVGQRTFDTAYTVKGDGTVGSPAWRIRVSNGETSH ELWGDAAMSWVQIYTPDDRHSLAVEPMTCGPDAFNEGPTHGDVIRLEPGNDVTLHWGIA >gi|302034473|gb|GL383162.1| GENE 299 301973 - 303601 1111 542 aa, chain - ## HITS:1 COG:CAC1816 KEGG:ns NR:ns ## COG: CAC1816 COG1418 # Protein_GI_number: 15895092 # Func_class: R General function prediction only # Function: Predicted HD superfamily hydrolase # Organism: Clostridium acetobutylicum # 50 537 33 511 514 318 40.0 2e-86 MLIALIAVSVLAVAAIIGSLTDRRAIGRRAERAESERDVKALELSRSQERLSRASQDLAD SRKDVAKARAELESSRTRASDEARRADNADQARRSAEALLEINRRSVEELTERDHRLQEA RRHLEEGLDKIEQDRLELAERSSQLDERDAELDRRHGQIVTELERVAGMSLDEARDELVE HLGREARVFAENSARAIVTEATASAEARARHIVAEVIQRCSSEMVADTVVSVVPLPSNEM KGRVIGREGRNIRTFEQVTGVTVIIDDTPEIVLLSCFDPMRREVARQALTDLVEDGRIHP ISIERAHQRAVDRIEDMCLDAAADALSRAGIDDIDDRLLPILGSLRFRTSYGQQVLDHCV ECARLAANLAAEIGADIEICRRAAFLHDLGKSLTPGVEGSSHAAIGAELARRYGESEEVI HAIAAHHDEIDPVSVTDFIVKAADAISAARPGARRESLEAHVRRMDTIEEIATSFPGVVR AFALQAGREMQILVDPGAVDDHQASRLARQIALAIGEQVTVPGRTRVTVIRSFQAIETVG DA >gi|302034473|gb|GL383162.1| GENE 300 303705 - 304220 211 171 aa, chain - ## HITS:1 COG:MT2805 KEGG:ns NR:ns ## COG: MT2805 COG2137 # Protein_GI_number: 15842275 # Func_class: R General function prediction only # Function: Uncharacterized protein conserved in bacteria # Organism: Mycobacterium tuberculosis CDC1551 # 8 152 19 167 178 95 43.0 3e-20 MTDDQWYEEAREICLKRLDRRANTRGELADILDSKGVPEPVREAVLDRLTEVGLIDDADF ANRWTASRHGMRGLSRRAVAAELSRKGVDSHVIEDATSQITDADELDAATELAITKLRAG RGIEEARLTRRVLGTLARKGYGPHIAWAAICAARDELGEEPPEAPTTGLFD >gi|302034473|gb|GL383162.1| GENE 301 304250 - 305296 1055 348 aa, chain - ## HITS:1 COG:Cgl1910 KEGG:ns NR:ns ## COG: Cgl1910 COG0468 # Protein_GI_number: 19553160 # Func_class: L Replication, recombination and repair # Function: RecA/RadA recombinase # Organism: Corynebacterium glutamicum # 6 330 17 341 376 475 75.0 1e-134 MAATADREKALATALQQIEKQHGKGSIMRLGEQETVKIAAIPTGSVALDVALGVGGLPRG RIVEIYGPESSGKTTVALHAIANAQAEGGICAFIDAEHALDPEYARKLGVDTDSLLVSQP DNGEQALEIADTLVRSGALELIVVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKMT GALNAAGTTAIFINQLREKIGVMFGSPETTTGGRALKFYSSVRLDVRRVETLKDGSEMVG NRTRVKVAKNKVAPPFKQAEFDILYGQGISREGSLIDMGVDCGIITKSGSWFSYNNEQLG QGKENVRKFLRGNPDVANEIEDKILTHLGLREAEVPEGVDPRTGEVEF >gi|302034473|gb|GL383162.1| GENE 302 305607 - 305801 196 64 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4070 NR:ns ## KEGG: HMPREF0675_4070 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 64 1 64 64 107 100.0 1e-22 MTETQLWTRLAEALGDDYCRIWAAQQAVPGLDSRTVQEALADGVDAKMIWRACWKTLELS DSLR >gi|302034473|gb|GL383162.1| GENE 303 306152 - 306955 601 267 aa, chain + ## HITS:1 COG:YPO0831 KEGG:ns NR:ns ## COG: YPO0831 COG1349 # Protein_GI_number: 16121139 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Yersinia pestis # 14 261 6 253 258 123 33.0 4e-28 MPSDAHSTSSRRNDRMVAILAMLRDRDEVPLRDMASALGASAATIRRDVVSLAEQGLLIR SHGTARRAGTGAELPVNLRDGRRRRAKEAIAHAVASELPIGRHAIGLTGGTTTTEIVRAL HHRHDLTLITNSVSIALEAASQGQQRVLITGGVLRPSSLELVGSLAESTFKQVNVGTAIV GCDGMSAEGGLTTHDGIEAATNHTMIKRAAHIIAAVDGSKIGRVTLAKLAEAKDVDLLIT DDSADPEELARLRALGIAIRIVHAPID >gi|302034473|gb|GL383162.1| GENE 304 307057 - 307332 391 91 aa, chain - ## HITS:1 COG:MT2816 KEGG:ns NR:ns ## COG: MT2816 COG1396 # Protein_GI_number: 15842285 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Mycobacterium tuberculosis CDC1551 # 3 80 2 79 112 78 60.0 3e-15 MKSTLLREMLGESLREQRFAQGRTLREVSSAARVSLGYLSEVERGQKEASSELISAICTA LDLPQSDLMRIVSDKMLKNEDAPEHRITVAA >gi|302034473|gb|GL383162.1| GENE 305 307434 - 307919 228 161 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 7 151 753 897 904 92 36 3e-17 MTGDEGARRLIAVLSEHGMTAATCESLTAGLVAATITTVPGASTVFRGGLVTYASELKST LARVDAQWIAENGVINSITAAQMAMGCRKVCDADLGMACTGVAGPDPQDGEQAGTVFIAV VYRGAPVVKRLQLEGSREEIRCGTVERLLDLGCEVVLGSEG >gi|302034473|gb|GL383162.1| GENE 306 307916 - 308530 678 204 aa, chain - ## HITS:1 COG:Cgl1919 KEGG:ns NR:ns ## COG: Cgl1919 COG0558 # Protein_GI_number: 19553169 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylglycerophosphate synthase # Organism: Corynebacterium glutamicum # 7 183 27 202 208 137 43.0 1e-32 MATKKDRPSSINVPNALTLLRVVAVPIFGWMLLAHAHEGGWRTTTTIVFMVAILTDFVDG KVARKYNLVTNFGKIGDSIADKALTGMAFIGLSIIGELPWWMTIIILLREWGITVMRMKM LKYKVMAANKGGKLKTAMQSLAITLFCLGLWRMPTFVYVIAWAVMIIAFVLTAITGLVYI RDAILIRNRAKMTESRPARKRTLK >gi|302034473|gb|GL383162.1| GENE 307 308639 - 310084 1321 481 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229861541|ref|ZP_04481155.1| SSU ribosomal protein S12P methylthiotransferase [Stackebrandtia nassauensis DSM 44728] # 13 476 1 457 464 513 58 1e-144 MSAADHLMTVHLVSMGCARNDVDSEELAARMEAGGFRLVDDPAEAETVVVNTCGFIEQAK KDSVDTLLAAADLKGNGITTSVVAVGCMAERYGRELAESLPEADAVLGFDDYGDIAGRLR TILDGGSLETHVPRDRRTLLPISPVDRPTARAEVSVPGHGTAPDLSASVTPDSGPRATRR RLGTGPSAPLKMASGCDRRCAFCAIPHFRGSYLSRPIAEIVEEARWLVDHGVKEVFLVSE NSSSYGKDLGDLRLLEKLLVNLDQVDGLEWIRVSYLQPAELRPGLIDTILATDKVVPYFD LSFQHASGPLLRRMRRFGDAESFLNIIDSIRSRCPEAGLRSNFITGFPGETDADVAVLAD FLQRARLDVAGVFAYSDEEGTEAAGLDGHVDEDVVTARREDLADLTDELVSQRAEDRIGT RGRVMVEEIDEAVIGRAEHQGPEVDGCVTLVDAAAVSVGDIVDVEFVGSDGVDLVARPAN A >gi|302034473|gb|GL383162.1| GENE 308 310095 - 310901 551 268 aa, chain + ## HITS:1 COG:Cgl2483 KEGG:ns NR:ns ## COG: Cgl2483 COG3001 # Protein_GI_number: 19553733 # Func_class: G Carbohydrate transport and metabolism # Function: Fructosamine-3-kinase # Organism: Corynebacterium glutamicum # 19 256 4 233 249 132 39.0 5e-31 MDEVVSTASYASTVGSMTFRKTDHHKNAIDYEVAGLMWLAAARPDGAGIVEVLDHGKGWL TEPELSTGHPTREAAEDFGRRLAHTHAAGASHLGAAPDGFVPDDGYIGRAPLPLPSEPIS SWGEFYAQYRIEPYMDSLDADARAIMSKLVDRLASGALDHDEPALVTCPAARTHGDMWAG NLMWTPDGVVLIDPAAQGGHAEEDLAALSVFGAPFAERIRAAYNEESPLADGWEDRIGLH QLHMLIVHCWLFGGGYVDQTVAIARRWV >gi|302034473|gb|GL383162.1| GENE 309 311282 - 311932 545 216 aa, chain - ## HITS:1 COG:lin1945 KEGG:ns NR:ns ## COG: lin1945 COG0461 # Protein_GI_number: 16801011 # Func_class: F Nucleotide transport and metabolism # Function: Orotate phosphoribosyltransferase # Organism: Listeria innocua # 8 212 3 207 209 229 54.0 3e-60 MTVTNNEIAREFAERLLAIEAVSLSPDAPFTWASGLHSPIYCDNRVTLSDPQTRDLIADG LASLVRTNFHQVDVVAGTATAGIAHAALAADRLGAPMAYVRSVPKDHGRGNQIEGRIPAH SKVIMVEDLISTGGSVLKAAQAVEREGSTVVGVLALFSYELEKGHRAFEKAGVPLYTLSN YPILIEVAAESGRITSEQQATLATWSSDPQAWSDAH >gi|302034473|gb|GL383162.1| GENE 310 311960 - 312670 554 236 aa, chain - ## HITS:1 COG:SP0701 KEGG:ns NR:ns ## COG: SP0701 COG0284 # Protein_GI_number: 15900600 # Func_class: F Nucleotide transport and metabolism # Function: Orotidine-5'-phosphate decarboxylase # Organism: Streptococcus pneumoniae TIGR4 # 5 230 5 228 233 253 59.0 1e-67 MDITRPIIALDLPSAEAALDFVGRFDGENLFVKVGMELFYAAGPSVVTSLKEAGHDVFCD LKLHDIPNTVKGAASSLSRLGADLLTVHAAGGRSMMEASLEGLGDAAETTRVIAITQLTS TSPEALKTEQLVDVPLVESVRNYAKLAQAAGLAGVVCSAHEAADIASVTGPNFLRVTPGI RPAGSAVGDQSRVATPGNAASMGSSAIVVGRPITKADDPVAAYHAIRDDWNAGRKA >gi|302034473|gb|GL383162.1| GENE 311 312696 - 313619 818 307 aa, chain - ## HITS:1 COG:L182555 KEGG:ns NR:ns ## COG: L182555 COG0167 # Protein_GI_number: 15673328 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotate dehydrogenase # Organism: Lactococcus lactis # 3 307 6 310 311 388 66.0 1e-108 MTRLAVSLPGLNLKNPIMPASGCFGFGAEYAEYYDLSVLGSIMVKATTLEPRRGNPVIRV AETPGGMLNAIGLQNPGLDVVMAEKLPWLAEHFPDLPIIANVAGYTTEDYVRVCEVISTA PNVAAVEINISCPNVKRGGITFGTNVTAAHDLTQAVVAAASVPVYVKLSPNVTDITEIAR ATADAGADGLTLINTLTGMRINLARRTPVIANATGGLSGPAVLPIAVRMIDAVTRVVDIP VIGMGGVMTSADALELMMAGASAVGVGTANFTDPLACPKIINGLEPLMDDLSIASLEDLR TQVRQSR >gi|302034473|gb|GL383162.1| GENE 312 313616 - 314410 417 264 aa, chain - ## HITS:1 COG:lin1948 KEGG:ns NR:ns ## COG: lin1948 COG0543 # Protein_GI_number: 16801014 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases # Organism: Listeria innocua # 14 264 6 254 254 202 44.0 7e-52 MTKTTGFRRGPQMMRLADRHEIATGIYSVRLIPHEPVPHVVPGTFLDLLLGGGHVLRRPL SIADADDEGYTLVFRVVGKGTDTLSVKPIGAEVDVLGPLGHGFDVDAVQPEGRALLIGGG VGIPPLYLLGRRLVERGVEVQFRLGFRDRNDIFWAERFGQLGEVLVSTDDGSVGTKGTVA QIAETDEARRFVPDLVQACGPLPMLRWVKSALAPTVRTQLSLEERMACGVGACYACVVGD ARDPDHQFRVCFDGPVLAAEEVLL >gi|302034473|gb|GL383162.1| GENE 313 314410 - 317616 2940 1068 aa, chain - ## HITS:1 COG:SP1275 KEGG:ns NR:ns ## COG: SP1275 COG0458 # Protein_GI_number: 15901135 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase large subunit (split gene in MJ) # Organism: Streptococcus pneumoniae TIGR4 # 1 1068 1 1058 1058 1493 70.0 0 MPRRTDLHRILVIGSGPILIGQAAEFDYAGTQACLALKEEGYEVILVNSNPATIMTDRDV ADKVYIEPITLEFVSSILRRERPDAIVPTLGGQTGLNMATELAKSGILDELGIELLGTKL SAIEKAEDRDLFKQLMDELGQPVPASEVVHTVDEAVKVGNTIGYPLIVRPAYTLGGTGGG MCCDEAELVRIVGKGLELSPVTECLIEQSIAGFKEIEYEMMRDGADNTMVVCTMENFDPV GVHTGDSIVFAPTQTLTDVEHEMLRDASIEIVRRLGIEGGCNVQLALDPNSFQYYVIEVN PRVSRSSALASKATGYPIAKIAAKIAVGLTLDEIRNPVTGTTWSMFEPMLDYVVAKIPRW PFDKFAQADRRLGTQMKATGEVMALGRTIEESLLKAVRSLEIGVDHLALREVADLPDDIL EERLLHARDDRLFCLTEAIRRGRTVQELHEQTRIDVFFLDKVAHILEIEERLRACPDDSE ALWIAKRNGFSDPAIARIWGETPDDVRVRRVDNGIVPVYKMVDTCAGEFESSTPYFYSTY EMENESKKSQRPSVLVLGSGPIRIGQGIEFDYATVHSVKAIQAAGYEAIIMNSNPETVST DFSISDKLYFEPLTFEDVMNVIDLEQPDGVIVQFGGQTAINLAGPLSAAGVPILGTQVAD LDRAEDREGFESLLAELGIPQAPGGTARSSEEAFAVAEELGYPVLVRPSYVIGGRAMAIV TSAEELKRYMRDAVHASPDKPVLVDRYLNGLECEVDAICDGTDVLIPGIMEHIERAGVHS GDSMAVYPPQRMSQQVADRIIEVTTKLARGLKTKGILNIQFVVANDPATGEETVYVIEAN PRASRTVPFLSKVTGVSMAEVATRIILGETLADLGLPPGLLPFSKRIHVKSPVFSFSKLD LVDSHLGPEMKSTGEVMGSDDTVEKALYKVFEAANLHVPEYGKILITVTDDAKPEALQLA RRFDRIGFQLVGTMGTARFFDEGGLRIDVAEKIGSGEAGSTESVLDLISRNGCDAVINVM GNGQDTIIDGKQIRREAIARGIPLFTSLDTAAAICRVMESRVFSTESI >gi|302034473|gb|GL383162.1| GENE 314 317616 - 318704 835 362 aa, chain - ## HITS:1 COG:SP1276 KEGG:ns NR:ns ## COG: SP1276 COG0505 # Protein_GI_number: 15901136 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase small subunit # Organism: Streptococcus pneumoniae TIGR4 # 1 354 1 353 359 451 59.0 1e-126 MSRRTLLLADGTSYQGEAFGADREVSAEVVFTTGMTGYQETLTDQSYNGQIVTFTYPLIG NCGINRDDMESLFPTTAGVICREVPRLASNWRNRRSLGEFLTTHGIPGLAGIDTRALVRR LRTAGVMKGVLLAPDADLDAELGKLRNIHLPTDQIAQVSTRTAYPSPLGGRSVVLFDFGL KHSILRELSRRGCAVTVVPWNISADRVRALAPDGIMLSNGPGDPKSIPGVQDVVRELQEG YPVFGICMGHQIFALANGADTYKLRFGHRGFNHPVRELSTGRIDFTSQNHGYVVDPESVS GTELEVTHIEINDETVMGVRHTRLGSFSVQYHPDAAAGPHDAAHVFDDFVALMDANHTGG QN >gi|302034473|gb|GL383162.1| GENE 315 318701 - 320038 1093 445 aa, chain - ## HITS:1 COG:lin1951 KEGG:ns NR:ns ## COG: lin1951 COG0044 # Protein_GI_number: 16801017 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase and related cyclic amidohydrolases # Organism: Listeria innocua # 23 431 21 424 426 410 50.0 1e-114 MSRRVLLTGLTMLVGATPVPSQLLIRDERIEAISRGRSNALDGADAEVVDLGGALVTPGM VDLHVHLREPGQEHKETIASGTAAAARGGWTTICAMPNTVPDPHSPELMADLNRRVEESA VVRVLPIAPITVGLTGNDLVDVEALTRAGAVAFSNDGKGVQLAGVMYDAMRSAAAVDRPI AAHAEDESLVRGGVINDGRRARELGLPPMTRLTETVQVARDVMIAEETAAHYHLCHASTR QSIRTLRRGREDGANVTGEAAPHHLLLADDDIPDDDGFYKMNPPLRTRDDLNAMVEGLCD GTLTCIATDNAPHAAEEKACSFRDAAFGVITNEHTFALLYTNFVLDRRFRLDQLVDWLTI GPAETFGIPEAGRLRVGGPADLAAFDLRTEMTIIPGDGAGMGRNTPFAGRSVRGDCVLTM VGGQTVYRRGQPIGKTDDHEMGDPQ >gi|302034473|gb|GL383162.1| GENE 316 320035 - 320979 663 314 aa, chain - ## HITS:1 COG:L45002 KEGG:ns NR:ns ## COG: L45002 COG0540 # Protein_GI_number: 15673584 # Func_class: F Nucleotide transport and metabolism # Function: Aspartate carbamoyltransferase, catalytic chain # Organism: Lactococcus lactis # 20 314 15 310 310 327 54.0 2e-89 MSTEVVEEFDADYTGRHFLSVEDMSSDDVMRIIERGRQFKAGDAPRVEPGHVAINMFFEN STRTMTSFQMAEHRLGMKILDFDPGHSSVTKGESLYDSVRTVDAIGAEVAVIRHSTNHYY DYLLATGMLGLSVVNGGDGSGQHPSQCMLDLMTIAEEFGHVDGLTVAISGDIVHSRVARS DAQILTRLGANVVFTGPREWMDHDVTRLGTMATLDEVIADVDVAMMLRVQHERFDAGPDF SATDYLHTFGLTDERAERMKPHAIIMHPAPVNRGCEISGHLVEAPSSRIFEQMGNGVMVR MAILEQVLHGRETK >gi|302034473|gb|GL383162.1| GENE 317 320976 - 321551 488 191 aa, chain - ## HITS:1 COG:lin1954 KEGG:ns NR:ns ## COG: lin1954 COG2065 # Protein_GI_number: 16801020 # Func_class: F Nucleotide transport and metabolism # Function: Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase # Organism: Listeria innocua # 10 187 5 181 183 190 58.0 1e-48 MQLTQSSGPVTVLDSKALERALTRICYEIVERNEGLDQLVIVGIRTRGAYLARRMATKLS SLGDVDVPVSELDITLYRDDLDPNEHRERPKTPVLSGNNVPSNLAGKTVVLVDDVLFTGR TVRAALDALVDTGRPDRILLAVMVDRGHRELPVRADFVGKNIPTSLGEAVDVHVTEVDGE DSVTIRKVASR >gi|302034473|gb|GL383162.1| GENE 318 321703 - 322713 832 336 aa, chain - ## HITS:1 COG:mll3309 KEGG:ns NR:ns ## COG: mll3309 COG0667 # Protein_GI_number: 13472878 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Mesorhizobium loti # 6 329 3 326 348 421 64.0 1e-117 MAVSTYEAAQDRYDTMEYRRCGTSGLLLPAVSLGLWHNFGDFHPGSTQRAVLRRAFDRGI THFDLANNYGPPYGQAEINFGRIMATDFKPYRDELIISSKAGYDMWPGPYGQGGSRKYLI ASCDQSLKRMGLDYVDIFYSHRFDPETPLEETMGALDRIVRSGRALYAGISSYDPKETER AATIARDLGTPLLIHQPRYNMFDRWIEDGLVDTCEQEGMGIICFSPLAQGILTDKYLRGV PAQSRAGMGAVSLRPDQIDDVTRAAIAALNEVAKDRDQTLAQMALSWILREPRITSVLVG ASSVPQLDSDIDALRTTPFTDDERVRIESVLADHVL >gi|302034473|gb|GL383162.1| GENE 319 322758 - 323339 446 193 aa, chain + ## HITS:1 COG:MT2103 KEGG:ns NR:ns ## COG: MT2103 COG1335 # Protein_GI_number: 15841531 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Mycobacterium tuberculosis CDC1551 # 6 191 2 186 186 169 50.0 3e-42 MTSSHRALLVVDVQPTFCEGGALAVTGGNACAERIATYIPTHYNCYDMVVTTQDWHIDPG NHFSNNPDFVDSWPPHGVVGTDEAEIHPAIAKIPVDARVKKGQYAAAYSGFEGTTEDGSI LETVLRDRGIEAVDIVGLALSHCVKDTALDAQRLGFVTTCLTDLSEPVSPEMGNAAVAVM EDAGVTVTTSSQL >gi|302034473|gb|GL383162.1| GENE 320 323613 - 323858 216 81 aa, chain + ## HITS:1 COG:TM0025 KEGG:ns NR:ns ## COG: TM0025 COG1472 # Protein_GI_number: 15642800 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase-related glycosidases # Organism: Thermotoga maritima # 2 67 617 683 721 61 43.0 4e-10 MLTVTFTVSNTGDRAGAAVPQVYPGFPNTTIDRCVRELKAFRRVELEPGQRQTVTVALTR RDLSYWDILPHPLRSYAVGSI >gi|302034473|gb|GL383162.1| GENE 321 323870 - 324325 389 151 aa, chain - ## HITS:1 COG:no KEGG:PPA0991 NR:ns ## KEGG: PPA0991 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 18 151 1 134 134 209 98.0 2e-53 MKVRTSCHAEQGKAKDFVGSGSDLDKLGFEAGQVVQELGWDDDVDEDLRQEVMDIIDGDM IEDSIDAVDIVWLWLRADDGDVADGLVDAMRDLSDDGFIVLVTPKVGRPGTIDPADLSDG TDTAGMVLTTSYDVSKDWQAHKIVRPRGGRR >gi|302034473|gb|GL383162.1| GENE 322 324379 - 325287 394 302 aa, chain - ## HITS:1 COG:no KEGG:PPA0990 NR:ns ## KEGG: PPA0990 # Name: not_defined # Def: endo-beta-N-acetylglucosaminidase H (EC:3.2.1.96) # Organism: P.acnes # Pathway: Other glycan degradation [PATH:pac00511] # 1 302 1 302 302 600 100.0 1e-170 MRLSRRHVLASTVGVVSTALITAQTPAGIAFARPRRASRAVTTAVYIEVNHEDLATVGAF VREGVHRPVFDLAMIFAANINYDGCTAYLHLNERVMETLRAAETQIRPLQRRGTKVLLSL LGNHEGAGFANFPTRHDADRFAAQVASVVHRYHLDGVDLDDEYSEYGKNGTGQPNEDFFV WFVRALRRHLGPHKLLTLYSIGPSVNRTVSSAGNASDDLDYAWNPWYGTYQEPSVLGMPR SHVGAAAVDWGHTSIEMIQTMASQTIHDGYGVFMTYDLRVSTNPSLVQAMTTALEGRRRL RQ >gi|302034473|gb|GL383162.1| GENE 323 325459 - 328212 2606 917 aa, chain - ## HITS:1 COG:Cgl2195 KEGG:ns NR:ns ## COG: Cgl2195 COG2609 # Protein_GI_number: 19553445 # Func_class: C Energy production and conversion # Function: Pyruvate dehydrogenase complex, dehydrogenase (E1) component # Organism: Corynebacterium glutamicum # 10 902 20 907 922 1204 64.0 0 MIPREERGPVLNGLPTTLPDVDPEETQEWIESLDKMVETDGPNRARIVLLKMLERARSHS RLGLSALTSTDYINTIAAEDEEEYPGDAEIERNIRRLLRWNSAITVHRAQRPGIGVGGHI STYASAVTLYEVGQNHFWRGQDAPGGGDQVFFQGHAAPGMYARAFLEGRLSEDDLDGFRQ EKSKAGHGLPSYPHPRMLPDFWQFPTVSMGLGPMNSIYQASMNKYLTNRGVKDCADQHVW AFLGDGEMDEPESRGFLQVAANEELDNLTFVINCNLQRLDGPVRGNGKIVQELEAVFRGA GWNVIKVIWGSGWDPLLQADRDGALVDIMNNTRDGDYQTFKANDGAYVREHFFGRDPRTA KMVDKWTDEQIWALRRGGHDYRKIYNAYKAATQFKGAPTVVLACTIKGYDLGTHFAGRNA THQMKKLALEDLKQFRDRLEIPISDKVLEADPYRAPYFHPGADDERIQYLMERRRALGGF VPERRTRHTPLPIPAQKAFDGVKRGSGKQEVATTMAFVRLLKDLMRDKNFAPHVVPIIPD EARTFGMDSFFPTIKIYNPHGQNYTPVDHELMLSYREAKNGQIIHTGINEAGSAAAFIAA GSAYSTQGVPMVPIYLFYSMFGFQRTGDSFWAAGDQMTRGFIIGATAGRTTLTGEGTQHM DGHSPVLAATNPAVISYDPAYSYEISHIVQAGLEHMYGENAEDVMYYLTVYNEPIVQPAE PEGVDAEGIVKGMYLLSKGSFEGVGEDARRVQLLASGVAVPWAIEAQQLLKGDFGVVADV WSVTSWNNLRRDAMEAEEQTFLHPEQGRRTPYITQCLADAPGPVVATTDYTCQVPDQIAQ WVPGDYASLGADGFGFSDTRAAARRFFHIDGPSMTVRALQMLVERGEVPEDWPAKAAEKY DLLNVNAGASGNAGGDA >gi|302034473|gb|GL383162.1| GENE 324 328574 - 329695 645 373 aa, chain + ## HITS:1 COG:ML1652 KEGG:ns NR:ns ## COG: ML1652 COG2508 # Protein_GI_number: 15827870 # Func_class: T Signal transduction mechanisms; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Regulator of polyketide synthase expression # Organism: Mycobacterium leprae # 7 371 37 408 414 216 38.0 5e-56 MARTSAMTTATLEEMGRRHSWFRDLSAEERSWISIVARSGIDGFVQWFADDDAEPYSPTD VFDVAPRSMTRKISLHQTVELVRTTIDVVEAQIETEMPRGDRQVLRTAIVHYSREVAFAA AEVYARAAERRGTWDERLESLVVDAVVRADADEQLISRASTLGWRPGINLCVVVGRAPTT EHELHVLRRDGERMQMTVLAAVQSDRLVVILAGEKLVDDPAAVAASEALANHFAPGPIVV GPVVADLTLAPASARAALSGIRAARAWPEGPQVMAAVDLLPEQVLSGDTDAIAWLVNEVY SPLATASGDLMDTTVSFLDHGCSVEGTGRAMFIHPNTVRYRLKRIQDVTGYSPSDPREAY VLRLAITLGRLRS >gi|302034473|gb|GL383162.1| GENE 325 329724 - 331169 1019 481 aa, chain - ## HITS:1 COG:Rv3331 KEGG:ns NR:ns ## COG: Rv3331 COG0477 # Protein_GI_number: 15610467 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Mycobacterium tuberculosis H37Rv # 17 479 40 498 502 333 46.0 6e-91 MASNGHARVEMKPGDSGSAGATRNSQTSRAVFIAVTAAALGITYGYDISNTAAALQFVQR DFGIYSAINTASVVGQIAGAILGGPMANAIGRKKSMLVIAAGYTIFAILTAISPSAGLFL AMRVLLGITIGLSITVVPVFIAESAPASRRGGLATAYQVTCVVGIILGYLVGYSLLPTDT WRWILGVAAVPAFIVLLMLVRTQETPSWYMLKGREDEARRAMERIEVAELVEPSLDEIRN SLSSRPSGSVWGRLREMFHGGMARATIFAIVLGFSIQITGINATIYYAPGIYSRMGFTDT ATTYLVPSLVQFLSLISVVISMLVIDKVGRRFVLITGISTMIVATIVLIVTYLASGFEGA VAGIIGLVEMSLFTMGFTFGFGSIVWVYAGEIFPARYRSLGASLVLTADLIANAITAQLG AAMLDGIGLAGTFGVYGGLLVVALLFLLRYAPETSGRSLEEIQDYWNNGARWPKADSPSM G >gi|302034473|gb|GL383162.1| GENE 326 331332 - 331697 282 121 aa, chain + ## HITS:1 COG:no KEGG:PPA0986 NR:ns ## KEGG: PPA0986 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 121 1 121 121 231 100.0 6e-60 MNVMIPVRPDGSVEPRFGKAPMVAVAQVDNDGHVTDWHTFKVEWDRLHNEGTEGRHHARI VRFLREHDVVACVATHAGMGMQRTLAAMKVPLLPATLPRARESVEHAMISAYADTKGTEE S >gi|302034473|gb|GL383162.1| GENE 327 332364 - 332609 169 81 aa, chain + ## HITS:1 COG:no KEGG:PPA0985 NR:ns ## KEGG: PPA0985 # Name: not_defined # Def: 2-dehydropantoate 2-reductase (EC:1.1.1.169) # Organism: P.acnes # Pathway: Pantothenate and CoA biosynthesis [PATH:pac00770]; Metabolic pathways [PATH:pac01100]; Biosynthesis of secondary metabolites [PATH:pac01110] # 1 81 224 304 304 155 98.0 7e-37 MARAHSARIADDFIEKNLTFLAGQDPASTTSFQRDILAGRPSEYAAQVGAVPRLGDEVGV DTPINDVIAAVLGRREAQNRA >gi|302034473|gb|GL383162.1| GENE 328 332669 - 333670 835 333 aa, chain + ## HITS:1 COG:MT2303 KEGG:ns NR:ns ## COG: MT2303 COG0331 # Protein_GI_number: 15841736 # Func_class: I Lipid transport and metabolism # Function: (acyl-carrier-protein) S-malonyltransferase # Organism: Mycobacterium tuberculosis CDC1551 # 24 314 1 293 302 200 46.0 3e-51 MTTVGTSSVPCLASDPSRGHSGDVLAIVAPGQGAQKPGFLSDWMSDATFSDHLAWLSAVA DIDLVTHGTTSDEATIKDTAVAQPLLVAAALATAWSVDPKIFSQADLLAGHSVGEIAAGA AAGAFSAEAAMVLVRERGRAMAEAASRTATSMTAVIGGDADEVLTAIKAAGLTPANHNGK GQIVAAGTVEQLEAFAAEPPSRTRLFPLSVAGAFHTAHMEPAVDHLREVAAAMPTTIPTV ALLSNLDGAVVADGREFADRLVQQVAHPVRWDLCMDTMAQRNITGLLELTPAGTLTGIAK RNLKGVELFNLNTPDQIPAAREFITTHSSKENA >gi|302034473|gb|GL383162.1| GENE 329 333667 - 334665 890 332 aa, chain + ## HITS:1 COG:MT0557 KEGG:ns NR:ns ## COG: MT0557 COG0332 # Protein_GI_number: 15839929 # Func_class: I Lipid transport and metabolism # Function: 3-oxoacyl-[acyl-carrier-protein] synthase III # Organism: Mycobacterium tuberculosis CDC1551 # 1 332 1 333 335 273 46.0 2e-73 MTAIKTRPVHGYSKFLSTGSARGSRVVTNKEMCTLIDSTPEWIEQRTGITERRWATNSET VASMGTTAARTALERSGLEASQIDAIIVATVSHHRPSPSLAAYIARELGLGDAAAFDLNG ACAGFCYSTALADSMIRTGSANYVLVIGVEKLSEMTNLDDRSTAFLFSDGAGAAIIGASD EPGIGPVVWGSRSDQLKTIELEDWPTASADPNKIHPLIRMEGRAVFKWAMTDVAKRAAEA IAEAGITPADLDVFIPHQANDRITDVVSRHLKLPESVTVCHDIADMGNTSAASVPIAIDR MLQRGQAHSGDLALIIGFGAGLVYAGQVIRLP >gi|302034473|gb|GL383162.1| GENE 330 334748 - 334993 416 81 aa, chain + ## HITS:1 COG:ML1654 KEGG:ns NR:ns ## COG: ML1654 COG0236 # Protein_GI_number: 15827872 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl carrier protein # Organism: Mycobacterium leprae # 18 76 19 77 115 65 59.0 2e-11 MADKDQILADMADIVNDITGVDQSEVTLEKFFVDDLDVDSLSMVEIIYACDEKFGVEIPD EESKNIKTVGDAVNYIIEHQG >gi|302034473|gb|GL383162.1| GENE 331 335067 - 336338 1177 423 aa, chain + ## HITS:1 COG:sll1069 KEGG:ns NR:ns ## COG: sll1069 COG0304 # Protein_GI_number: 16329903 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: 3-oxoacyl-(acyl-carrier-protein) synthase # Organism: Synechocystis # 4 416 9 412 416 304 43.0 2e-82 MSDVVITGFGTTTPLGPDAPSTWQGLLEGRNGVHTLDFDWIDDVPVKFAAPAVDDPANHL PRPQARRLDRSSQLALVAAKEAWADAGLELPEADDNSGSNGIDPERLVVCCATGIGGLHS LLGQWDIQKDKGFKRVSPFTVPMLMANAPAANIGLMVHAKAGVHTPVSACASSSEAISLG LDQLHLGRADIAVVGGAEAIIHPLPVAAFAQMKALSTRNDDPEHASRPWDVDRDGFVIGE GAAIMVIETLEHAQARGAKIYGTLAGSGISADSHDIVQPDPTGSGQASAMHKALASAGLS PSDVNHVNAHATSTPLGDTAEAHSIAAVLEKATDQVLVNGTKSMTGHLLGGAGALESFAA VMALLKRQVPGTINVEHLEEGLEINVVTETTDLPDGDLAALNNSFGFGGHNVTLAFTNTN ATR >gi|302034473|gb|GL383162.1| GENE 332 336424 - 336921 129 165 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4040 NR:ns ## KEGG: HMPREF0675_4040 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 165 1 165 165 297 100.0 1e-79 METTQLASGTLFIHSASTALRSHIEWAADAAFVMPAPLRWTSQPVEPGTWRAESAWCGDV VDARTFISTLAAWQRVRVELTVETGAAPHRWSVTPDLGIFSAPIDEAGSVLVDEMRLRSA ITAARRTGLRLDDEICDLLGEPWDVELEPYRACDPSLQVPWLSAG >gi|302034473|gb|GL383162.1| GENE 333 336999 - 337715 516 238 aa, chain - ## HITS:1 COG:XF1717 KEGG:ns NR:ns ## COG: XF1717 COG0325 # Protein_GI_number: 15838318 # Func_class: R General function prediction only # Function: Predicted enzyme with a TIM-barrel fold # Organism: Xylella fastidiosa 9a5c # 6 230 32 255 266 218 53.0 7e-57 MSMADNLAAVRTRIDDACRACDRNPGEVSLLPVSKTKPPSMVDEAYRAGYRLFGENKVQD ALAKSELMDANHPGLEWSIIGGLQTNKAKYVARFATEFQALDSLKIAHELDKRLQKEGRQ LRVLVQVNSSAEPQKSGIAPEEAVDFARELAAFDSLDVRGLMTVALNSSDQRAVADCFDL VVATQEKLRQEAGDTSDWSELSMGMSGDLEIAIAHGSTQVRIGTDIFGARDPARTWRP >gi|302034473|gb|GL383162.1| GENE 334 337764 - 338717 567 317 aa, chain - ## HITS:1 COG:ML1808 KEGG:ns NR:ns ## COG: ML1808 COG2304 # Protein_GI_number: 15827966 # Func_class: R General function prediction only # Function: Uncharacterized protein containing a von Willebrand factor type A (vWA) domain # Organism: Mycobacterium leprae # 13 291 19 308 335 174 39.0 2e-43 MTLIAFGRPGRLWWLVVPVVFLAVYLVVVMWRRQPHQGRNELKRLLPSSRPWKQHLAMGL SVLSMAIIVLAFAQPKAYHEVPRDRATVVVAIDVSRSMVATDVEPSRLSAAKTAAKDFLG DLPPRFNVSLVKFAASAQVVVPPTTDRAAVSTAITNLQVLPSTAIGEGIYSSLNALKLVP DDPKHPGQKPPAAIVLLSDGATNVGRPSLEAAKEAGRQHVPVYTIAYGTAGGYVVEGGQR QPVPVNHYELAAIAKASGGEKFSAESLGQLSDVYKSIAQSVGYEKVFGEVTDKYVGVALA LVVLTAASVISLCARWP >gi|302034473|gb|GL383162.1| GENE 335 338717 - 339685 608 322 aa, chain - ## HITS:1 COG:ML1808 KEGG:ns NR:ns ## COG: ML1808 COG2304 # Protein_GI_number: 15827966 # Func_class: R General function prediction only # Function: Uncharacterized protein containing a von Willebrand factor type A (vWA) domain # Organism: Mycobacterium leprae # 6 299 9 311 335 158 32.0 1e-38 MTPLFLGLPEVKSPWVPWLLLLVPVLLVFYIWASHRSRSTAMRFTNTAILGAVMSKQPQW KRHIAVAAALLCVATTTVAWARPMGIEQVPRNRATIVVAIDSSLSMKADDVSPTRLAAAK AKAKDFINSLPTGFNVAVVSISEHPEIRMPPSTDRPTVLRAVDGIELQDGTALGGAIDKS LEAVKMAPGGSKNPAPAAIVMLSDGDNTQGGSPLVAANRAAAAKVPVYTIAFGTETGYVD LNGQRERVAPDTKLLSTVADRTHAKSWTADSADKLQEVYQQVHSSVGYEPVRKEVTATWA FYAFCFAVVSGLATLSVAVRWP >gi|302034473|gb|GL383162.1| GENE 336 339682 - 340725 793 347 aa, chain - ## HITS:1 COG:ML1809 KEGG:ns NR:ns ## COG: ML1809 COG1721 # Protein_GI_number: 15827967 # Func_class: R General function prediction only # Function: Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) # Organism: Mycobacterium leprae # 8 335 3 315 320 222 43.0 7e-58 MARPTFRDPQAPSVAQTLVSPPTGATLPLNQLAPEAALRRLELTIVRRLEGFLHGDHLGL LPGTGADVNDARPYEPGQDDVRMMDWAVTARTTVPHVRETIVDRELEVWALLDVTGSMNW GTVSMTKRDLGIAAIATIGFLSQRMGDRFGGVIMRPDSVRRLPARSGRTALYGLLRSMLT EPIVADNAPGQVTLAKGIENLAASGRRRGMKVVVSDFLSPGDDVLNPNDRPEWERSLRRL SVRNQVLCIEVVDAAELDFPDVGDVMVRDPETSFAHYVNTADKATRERMNAASRAQRERI SAAIRRAGAGHLQLRTDSDWVTDIARFVLGYRRTAAILHQPPQGVTK >gi|302034473|gb|GL383162.1| GENE 337 340736 - 341794 824 352 aa, chain - ## HITS:1 COG:ML1810 KEGG:ns NR:ns ## COG: ML1810 COG0714 # Protein_GI_number: 15827968 # Func_class: R General function prediction only # Function: MoxR-like ATPases # Organism: Mycobacterium leprae # 12 319 45 352 377 366 61.0 1e-101 MSNDEAARLIGQAIGQVQRVIVGQERMVEQLMVGVLAKGHILLEGVPGVAKTLAVRSFAT VLGGSFARVQFTPDLVPSDIVGTRIYSASKETFDIELGPVFVNFVLADEINRAPAKVQSA MLELMAERQVSIAGQTFPAPHPFSVIATQNPVESEGVYPLPEAQRDRFLLKIDVPYPRGN EEFEILRRMSVKAPQPQQVLTPEAVVALQDMASDVFVHNLVAEYVVRLVLATRNPGDFGM SDLANVIQIGCSPRATLGLVAAARALALVHGRDYVLPTDVQAVAVDVMAHRLVLSFDAIA DNVSASDVIERVVAMVPPPTPVWNEEQRQTAQHNYPNDLGQYPAPTTPPAQL >gi|302034473|gb|GL383162.1| GENE 338 341851 - 342108 127 85 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4034 NR:ns ## KEGG: HMPREF0675_4034 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 25 85 1 61 61 119 98.0 3e-26 MASLGDGRRAKTRRPAAGQTVAGVVPQEAMDYSTSSIISPHLGHDPRTTGAYWHWFFVVL GLWHCHGIVSAGPSRVLRKPGRRRQ >gi|302034473|gb|GL383162.1| GENE 339 342006 - 342938 200 310 aa, chain + ## HITS:1 COG:no KEGG:PPA2378 NR:ns ## KEGG: PPA2378 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 310 1 310 310 400 100.0 1e-110 MSSNPWPPEALPLQPSDPPRVDEFWLDARLLTMPSGTVFSAHDDDGQGVLVIVLSHGAAS DPASWDRLAGEVNHLHSDTVIARGGAGQSTGRLSGLYRPGTGPENGGPSLAPWVALVNDG SRAAVAEARRILDAVDMSALSGTPVAGPSFRLHWIDDTAAGRVHTWPLPWPGRRDKAGWS TTVIAWLLTLFIALTGLLIAVLLFQNVPPSPPPPPVPTSASSNRSAHSSSSPTPSRSSGQ SASPSHSSKSPSPSKGQTPSPTSTSPSTGRSGSPTPSNNPSTSPSRTPSMQSPGAGTGTS SGTPTGRGRL >gi|302034473|gb|GL383162.1| GENE 340 342938 - 343735 717 265 aa, chain + ## HITS:1 COG:ML0089 KEGG:ns NR:ns ## COG: ML0089 COG0561 # Protein_GI_number: 15826925 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Mycobacterium leprae # 4 258 16 274 281 100 31.0 2e-21 MIALIATDLDGTFLGADKLPSAENTEAMFAAADAGVHVVFATGRPYRWLTVLDPFRPIHP TLLASNGAVSVNAATGKVLHDLYMTPQTVAGIVCDVRQALPHALFCTEEATQWFSEEGFD RWQISGPPDGEGQIESFLGDDHRIVKLLVRTFGFPSDELFQIVKPIVGDRGTVSLSATMT DGLVEIAGRGVSKGSALKQVCDDLGIDPADAAAFGDMPNDLTMLETVGHPYIVSGAHPVL RDRGFAIIGNHDESAVGRKVRALLD >gi|302034473|gb|GL383162.1| GENE 341 343908 - 344228 58 106 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|314984008|gb|EFT28100.1| ## NR: gi|314984008|gb|EFT28100.1| hypothetical protein HMPREF9594_02233 [Propionibacterium acnes HL005PA1] # 17 106 1 90 90 174 98.0 2e-42 MLALLLSSAPYAPQLKLAGLFLFTLNYNILDLPREWVDIAGDIRSSAAFLACYVNKYWPR PVEHTRVSYGLATLAGLDRPGRRSSLCRQAQRRVVATAACRIYLPR >gi|302034473|gb|GL383162.1| GENE 342 344182 - 344349 92 55 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|332675369|gb|AEE72185.1| ## NR: gi|332675369|gb|AEE72185.1| hypothetical protein PAZ_c10100 [Propionibacterium acnes 266] # 1 55 1 55 55 107 100.0 3e-22 MPFNGTGPQFYTWLVASQYSHSHAGANLKGINDVTCRPVLGACPVTLIGTLRAPA >gi|302034473|gb|GL383162.1| GENE 343 344281 - 344526 143 81 aa, chain + ## HITS:1 COG:no KEGG:PPA0972 NR:ns ## KEGG: PPA0972 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 81 1 81 81 125 100.0 5e-28 MRMRVLRGHEPGVELWSCAIKWHAIGTMRSGYVAGVIGSDSRVAREVLAIMVIGSAVAAA ATTARTDLRSLVDLRNATPYR >gi|302034473|gb|GL383162.1| GENE 344 344853 - 345038 133 61 aa, chain - ## HITS:1 COG:no KEGG:PPA0971 NR:ns ## KEGG: PPA0971 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 61 1 61 61 104 100.0 1e-21 MLEASSHHDVTQKCYREAVNHRGRSVVRRQGQQRKVLADVLPGKVATCLGALAQPVRAGD S >gi|302034473|gb|GL383162.1| GENE 345 345325 - 345558 75 77 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313792208|gb|EFS40309.1| ## NR: gi|313792208|gb|EFS40309.1| hypothetical protein HMPREF9575_02198 [Propionibacterium acnes HL110PA1] hypothetical protein HMPREF9597_01500 [Propionibacterium acnes HL005PA4] hypothetical protein HMPREF9594_02236 [Propionibacterium acnes HL005PA1] hypothetical protein HMPREF9569_01999 [Propionibacterium acnes HL078PA1] hypothetical protein HMPREF9602_01993 [Propionibacterium acnes HL030PA2] hypothetical protein HMPREF9588_01963 [Propionibacterium acnes HL025PA2] # 37 77 1 41 41 75 100.0 1e-12 MRRHNKVANNPAQLRFGPILTPISMVKTATQPGGKTMGISTNTAGRLLIDSSQGIAMMAV KSFEGEFWSPPLPSATW >gi|302034473|gb|GL383162.1| GENE 346 345701 - 347062 1204 453 aa, chain - ## HITS:1 COG:PA5510 KEGG:ns NR:ns ## COG: PA5510 COG0531 # Protein_GI_number: 15600703 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Pseudomonas aeruginosa # 11 435 3 429 449 219 33.0 7e-57 MSTTLAPDSQLKDLGYQPSLNRQLPFGSLLVYGLLFFVPMAPVAVFGLVVNRSGGVPVLV YLVAAAVMGLSAISYREMALRFPVAGSVYGYTRFSLGRTPGFIAGWLILLDYILMPALLT VLSAVALSHIWPSVPMGIFSLVFVFASMALNLQGMTVTTRVGIVLLTIQLATIAFFLVCV GLGLAGGGVVWSWHALWRSGTSWTSVASAVSIAALSYLGFDAVATLNEEARGGGRAVGIA TLSLVGLLAVLFGIQVMAAGLVSDATHFAPGGATDRAFYHAVDTVCPAWFIPVFTVVNAF VAIFACLVVAHSSTARLIFAMARDKVMPPALSRTNSKGVPWVAIIVVATVTAILAITFDS HVETMTTLVTFGALSSYVLLHADVIVQCIVKERSHNWVRHLIVPILGALTLLVALAKTEE MTRIVGLGWLAAGIIGAVIARVRHSHHVGTGAS >gi|302034473|gb|GL383162.1| GENE 347 347059 - 347763 499 234 aa, chain - ## HITS:1 COG:Cgl2554 KEGG:ns NR:ns ## COG: Cgl2554 COG0132 # Protein_GI_number: 19553804 # Func_class: H Coenzyme transport and metabolism # Function: Dethiobiotin synthetase # Organism: Corynebacterium glutamicum # 10 218 4 202 224 105 36.0 5e-23 MNITDLNGIVIVTGTDTDVGKTVTTAVIASALKQSGKDVTIIKPYQTGLDHDEPGDVHDA GRLASIDADNVLEYVRCPEPLAPTTSAARAGMTIPSIEEVATRILVDSDGHDATLVEGAG GILVGLDNDGSGVLDLMDALTRRGHEPHVIVVTRSVLGTLNHTGLTCNAIRDRGHQVDAI VIGSWPDRPDLAERCNLEEIEDAAGAPLVGVIPAGIGKDPEAVQQTARNLGETQ >gi|302034473|gb|GL383162.1| GENE 348 347760 - 349031 897 423 aa, chain - ## HITS:1 COG:PM1900 KEGG:ns NR:ns ## COG: PM1900 COG0161 # Protein_GI_number: 15603765 # Func_class: H Coenzyme transport and metabolism # Function: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase # Organism: Pasteurella multocida # 1 401 62 453 468 372 46.0 1e-103 MLAVTAANGVRLQLHDGEHHHEVIDAMASWWCQIHGYRNPVLDEALNRQSSQFSHVMFGG LTHKAAVDAVMSLVRLAPGPLDRIFLADSGSVGVEVSLKLARQVQIARTAARGGTLTRTR VAALRGAYHGDTLGAMSVCDPIGGMHAMFSDSIPQQIFLPRPPSFAADEADVETWCSEAD EILDTHRDDLAGIIVEPILQGAGGMWPWSPSCLKHLRRRADELDLVLIADEVATGFGRTG KLFACEWADIVPDIMVVGKSMTGGYLTQSAVLCSDELASEVSRGPGGSLMHGPTFMGNPL ASAVAAASLAIISQGQWNDDVTRIADVMSRELASLRNVPGVIDVRVFGAIAAVQVDTPIV MRRATRTTVENGVWLRPFRDLVYAMPPYICTNDDLEAMAAGMRAVVIDQLDAAQDSTDYR KES >gi|302034473|gb|GL383162.1| GENE 349 349183 - 349788 400 201 aa, chain - ## HITS:1 COG:Cgl0765 KEGG:ns NR:ns ## COG: Cgl0765 COG0311 # Protein_GI_number: 19552015 # Func_class: H Coenzyme transport and metabolism # Function: Predicted glutamine amidotransferase involved in pyridoxine biosynthesis # Organism: Corynebacterium glutamicum # 4 199 2 194 200 210 56.0 1e-54 MAPLVGVVALQGGFAEHIEVLESLGANTRRVRRSADLQGLDGIVLPGGESTVIDKLMRSF SLAEPLKDAVRRGLPVLATCAGLVVLATDLEDAAKGQHTLSLLDVTVRRNAFGSQLDSFE GTLDIDGVGDGVSATFIRAPVITRVGPGVEVIAQLPDEAGNVSGAIVGVRQRNVLALSFH PEETDDDRVHRTWLRQVSEEV >gi|302034473|gb|GL383162.1| GENE 350 349790 - 350704 810 304 aa, chain - ## HITS:1 COG:Cgl0764 KEGG:ns NR:ns ## COG: Cgl0764 COG0214 # Protein_GI_number: 19552014 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxine biosynthesis enzyme # Organism: Corynebacterium glutamicum # 15 304 30 319 319 446 87.0 1e-125 MGSMSEHIPATNSTGTTRVKRGLADMLKGGVIMDVVTPEQAKIAEDAGACAVMALERVPA DIRAQGGVARMSDPDLIEGIIEAVSIPVMAKARIGHFVEAQVLESLRVDFIDESEVLSPA DYANHIDKWAFGVPFVCGATNLGEALRRITEGAAMIRSKGEAGTGDVSEAVRHLRTIRAE MARLSSMSPDELYVAAKELQAPYDLVAEVARTGELPVVLFVAGGVATPADAALVMQMGAQ GVFVGSGIFKSGNPAARAAAIVKATTAYDDPDTIAEVSRGLGEAMVGINVADVPAPHRLA ERGW >gi|302034473|gb|GL383162.1| GENE 351 350875 - 352191 553 438 aa, chain + ## HITS:1 COG:Cgl0763 KEGG:ns NR:ns ## COG: Cgl0763 COG1167 # Protein_GI_number: 19552013 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Corynebacterium glutamicum # 3 431 32 451 453 379 54.0 1e-105 MDGVLAPGDHLPSTRVLSAQLRVSRGTVVASYEQLEAEGYLVAAAGSGTQINPDLRGLHR RSATTASVPRPQRHRGIDLTPGVPDTAGLANSAWRSAWHRSCVNPSRITDPLGSPHLRHE IAEHLRQMRSLLADPRQVVVTGGARAGLAELIQVLCDGSRRLTIGVESPGYPSLRRVPTA LGHRIVGLPTDDQGLDPASLPTGRDRKRLDAVLITPSHQYPWGGSLSASRRAAVIEWAEM ASCWIVEDDFDSELRHVGAPLPALASLDEEHTILLGTFSSVLTPALGCGYLVVPPDLVHS FARQRRATGQPVPAIVQEAVADYLSTGALRRRTQRMRQVYRRRRRTVIDTLGSLPGTTLQ PIDGGLHAVLVFDGSEDDVVQRCRQEGVGVTPLSAYWGSSDAGVAGIVLGFGSHDDATLA SALKIIAGVVTTHGRLSS >gi|302034473|gb|GL383162.1| GENE 352 352253 - 353188 768 311 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 [Streptococcus pneumoniae SP6-BS73] # 4 307 3 305 308 300 52 8e-80 MAKIANDVTELIGNTPLVKINKLFPDSQATVLAKLEFYNPASSVKDRIATSIVDAAEASG QLNPGGTIVEATSGNTGVGLALVGAARGYKVIITMPETMSKERRAIIRLLGAELVLTPGA DGVPGANSKAAEIVENTPGAILASQFDNPANPAIHHDCTGEEIWNDTEGEVDAIVAGIGT GGTISGAGKYLKEKDPEIKIFGAEPAESPVITKGDKAPHKIQGWGPGFVPDNLDKSVVDG ILLVPGDEAIAFARRAAAEEGIITGISGGGALQAAGQVVARPEFAGKTIVVVIADTGERY LSTALFEGLLD >gi|302034473|gb|GL383162.1| GENE 353 353451 - 353687 131 78 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313792218|gb|EFS40319.1| ## NR: gi|313792218|gb|EFS40319.1| hypothetical protein HMPREF9575_02208 [Propionibacterium acnes HL110PA1] hypothetical protein HMPREF9576_01623 [Propionibacterium acnes HL110PA2] hypothetical protein HMPREF9589_01225 [Propionibacterium acnes HL059PA1] hypothetical protein HMPREF9593_01166 [Propionibacterium acnes HL046PA2] hypothetical protein HMPREF9604_01871 [Propionibacterium acnes HL036PA1] hypothetical protein HMPREF9605_02048 [Propionibacterium acnes HL036PA2] hypothetical protein HMPREF9612_02139 [Propionibacterium acnes HL063PA2] hypothetical protein HMPREF9598_01163 [Propionibacterium acnes HL050PA1] hypothetical protein HMPREF9606_01845 [Propionibacterium acnes HL036PA3] hypothetical protein HMPREF9614_02158 [Propionibacterium acnes HL002PA2] hypothetical protein HMPREF9618_02206 [Propionibacterium acnes HL082PA1] hypothetical protein HMPREF9620_02088 [Propionibacterium acnes HL037PA1] hypothetical protein HMPREF9595_00672 [Propionibacterium acnes HL005PA2] hypothetical protein HMPREF9596_01275 [Propionibacterium acnes HL005PA3] hypothetical protein HMPREF9565_01988 [Propionibacterium acnes HL053PA2] hypothetical protein HMPREF9610_00672 [Propionibacterium acnes HL027PA2] hypothetical protein HMPREF9615_02025 [Propionibacterium acnes HL002PA3] hypothetical protein HMPREF9584_01490 [Propionibacterium acnes HL092PA1] hypothetical protein HMPREF9586_01754 [Propionibacterium acnes HL083PA2] hypothetical protein HMPREF9563_01884 [Propionibacterium acnes HL020PA1] hypothetical protein HMPREF9579_01943 [Propionibacterium acnes HL087PA1] hypothetical protein HMPREF9588_01953 [Propionibacterium acnes HL025PA2] # 1 78 1 78 78 122 100.0 8e-27 MLGVLAKSATTPTYTHHHGGGHNRLTGTITPDTVCAHHSTFPPISHDHRPNRNIYRFSSY SVRRQSSMASESMQAQLP >gi|302034473|gb|GL383162.1| GENE 354 353734 - 354774 740 346 aa, chain - ## HITS:1 COG:MTH1760 KEGG:ns NR:ns ## COG: MTH1760 COG1877 # Protein_GI_number: 15679748 # Func_class: G Carbohydrate transport and metabolism # Function: Trehalose-6-phosphatase # Organism: Methanothermobacter thermautotrophicus # 93 291 26 213 264 70 26.0 6e-12 MSWTVSDIFDHTSHGGHAVQQGHFHATNRWFPFEVILCYLAARTHHESGMCDDCLMTDRP VPADKSWTALTDAGRGILDAVATAPATVVLALDFDGTLAPIVDDPAASTMAQESREAMSR MDGKLAAMAIVTGREVAAVRRMTAVDQQPGLEHLVVLGQYGVERYDAASGVLRDPEVPEA VRLAKGRLEELAEELGREDPRDKGCWTEDKGRAVALHTRRASDPTHALATAVPRVREIAT DLDLHCEDGRNIIEVKSAVTTKAQALRELIDEVEPQILIMCGDDLGDVPALEVVAEWINA GHPGARVVSFSGEQPLMADYADVICDQTEGISAFLRDLADRVCVEM >gi|302034473|gb|GL383162.1| GENE 355 354752 - 356155 1403 467 aa, chain + ## HITS:1 COG:ML2254 KEGG:ns NR:ns ## COG: ML2254 COG0380 # Protein_GI_number: 15828204 # Func_class: G Carbohydrate transport and metabolism # Function: Trehalose-6-phosphate synthase # Organism: Mycobacterium leprae # 2 464 9 489 498 480 52.0 1e-135 MSETVQDKVDFLVIANRLPVDRKVDDDGSVSWKSSPGGLVTALEPVMQRKGGAWIGWHGA PDEVVKPFHHDGYDIHPVPLSAQEVEEYYEGFSNATLWPLYHDCIVEPVFHREWWDAFQK VNKRFAEQAAEQAAEGATVWVQDYQLNLVPKYLREMRPDLRIGFFLHIPFPPIELYSRLP WREELVEGLLGADLIGFQTPGAAANFQRLARHRPGVTAARGRAHTPDGRTVVIRDFPISI DSRGFHELATSEKVKAEAAKLREDLGHPGTIIFGVDRLDYTKGLRQRIRAVGELFKEGKL DPHEVVFLQLATPSRERVEEYKILRDDINLLVGQINSKVGSIANRALVYRNESVPREVLA AMYQMADLMLVTPVRDGMNLVAKEYIACRSNDDSALVLSEFAGAARELKQAYMVNPYDID GMKATIMKALTDSPKIKARKMRSMRRQVFDKTIDVWADNFLTELEGQ >gi|302034473|gb|GL383162.1| GENE 356 356197 - 357177 658 326 aa, chain + ## HITS:1 COG:BS_ytmO KEGG:ns NR:ns ## COG: BS_ytmO COG2141 # Protein_GI_number: 16079985 # Func_class: C Energy production and conversion # Function: Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases # Organism: Bacillus subtilis # 1 326 2 330 334 183 34.0 5e-46 MKLSALEQIPLFVGHDVTQTLDETVTLAQKLEEIGFHRFWLAEHHNTDHFLSSAPDLLMA RIATATQSIRLGSGGVMAMHYGSLQMAERFSTLTAFFGDRIDMGLGRAPGGDMLSAHALN QGQVIRPEAINSLIAETVGFVRETLPPKHPYAKVVVPPAGQIQPQTWLLGSSGQSAAWAG EQGMDYAYAQFFTGRQDTGIMDHYRAHLSDGFPGRTLSAVCVSAAPTRQEALEQSLMAAN FRVSLGTGRPVTFVTASQMDAETRSLLTSYVLSNEDTIFVGDYDEVADKLTAFQDAHHVD ELMLISYIDNVQTKVERYRQLAKRLI >gi|302034473|gb|GL383162.1| GENE 357 357491 - 357997 372 168 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4016 NR:ns ## KEGG: HMPREF0675_4016 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 168 1 168 168 296 100.0 2e-79 MWWTKGPSADEMARLRAVLGFNDVKVLAHGRGDGAIVIAVTEGLVVLTDEVDSAVAWHEI VRGRWNGEASTLSWEFLDGSSASVVLSKPGKIPEVFRAKITESIAATRTVPVHGGNVLIA GRIPAGRLADADGAIAWTAVARDSADLNDPETRQAVMEATDSLKNEWG >gi|302034473|gb|GL383162.1| GENE 358 358011 - 358823 382 270 aa, chain - ## HITS:1 COG:PA3622 KEGG:ns NR:ns ## COG: PA3622 COG0568 # Protein_GI_number: 15598818 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Pseudomonas aeruginosa # 44 266 78 324 334 70 29.0 3e-12 MRYTDFIDGVGILDPAEEHDLFRRLDAGAIADAILAGHFLAAVPVSEAELRRISDDGVGA RQTLWRQMLAIVLTQARQAAVSYRCSVEDLIQAGCIGLGEAIERYDVRRGARFSTVAWTW IRRRIGEEVVRLSGARSRSVMREAAEVARIEEELTARWQSVPSSDAIAARMGKDVMWVEK RRVECWEVETSFFEQVAVVQKSCDDPESGLIGLLTGQERRIVELRHGFEGEPMTITAVAH ELGLSASNVRRIEQRALGRLRRHLQQVVAA >gi|302034473|gb|GL383162.1| GENE 359 358910 - 360763 1405 617 aa, chain - ## HITS:1 COG:Cgl2216 KEGG:ns NR:ns ## COG: Cgl2216 COG0358 # Protein_GI_number: 19553466 # Func_class: L Replication, recombination and repair # Function: DNA primase (bacterial type) # Organism: Corynebacterium glutamicum # 3 609 6 627 633 499 44.0 1e-141 MAGRINEEDIALVRERARIDEVVGEYVTLRHAGGDSLKGLCPFHDEKTPSFQVTPSRGLF YCFGCGEGGDTISFVQKIDNLTFVEAVQRLADKVGVQLRIIDDGRPGLEPGLRMQILAAN EAAAEFFQSQMSTDEGRIAREFVAGRGFSPDAAVQFGMGYAPRDGHVLRDHLMAKGFAPK VLIESGLVRSQGWDFFQGRVLWPIKDSGKSVLGFGARRVYDDDRLPAKYVNTPETPVYKK SHVLYGLDLARANIGKKSQAVIVEGYTDVMAAHLSGIDTAVAACGTAFGDDHARLIQRLM GNSGSLNGEVIFTFDGDAAGQKAALKVFRGDNQFSSQTYVAVEPTGLDPCDLLMQRGPEA VRELVARRIPLYRYVMENTVSQFDLDRADGRVAAIRAAAPLVTSIRDQSLVDGYLRELSQ VVGTDVDLVRREVSHTRRQHRSEPQLTIVPPPEPQQGSGIPWPDPADVSLSAERGFLKLA LQHPDLFNEEWDQVEVEDLRHPAYQAVFEAVLAVPRGQDRWTEKVSEATPDPQVKQLEVA LLVESVLREEPDRDYAEAYAARVRLLSITDDIANLKSRLQRTNPNQDRKLYNAMFSDLVT LEALRKSLIVAGGAASA >gi|302034473|gb|GL383162.1| GENE 360 360671 - 361579 760 302 aa, chain + ## HITS:1 COG:STM0503 KEGG:ns NR:ns ## COG: STM0503 COG0390 # Protein_GI_number: 16763883 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Salmonella typhimurium LT2 # 59 282 11 236 259 80 29.0 3e-15 MAQGDVLTNDFVDPGPFPNQGDVLLVDPASHTYDPTHVWPEHPNGAKLSAVTVNPTWQLG LAMVLLVALAVIASLLGRLGVAKASVIASVRAVVQLGIVSVILAYALAHMWAACLFTVLM FAIAVHTTANRSGVSAAWMWAAIAMIAGVLPVLLIIFATGCAPLSPASLIPVAGIIIGNI MSGHTLACRRFFADLREGIGIFEAGLAVGFPRRDAIALVTEPSVTESVLPTVDRTATVGL VTLPGAFVGVLLGGGSALQAGAAQALVLIGILAGQAVTVIVAHELVKGAKLLPEDLTGKL HP >gi|302034473|gb|GL383162.1| GENE 361 361599 - 362717 686 372 aa, chain - ## HITS:1 COG:CC2008 KEGG:ns NR:ns ## COG: CC2008 COG0232 # Protein_GI_number: 16126251 # Func_class: F Nucleotide transport and metabolism # Function: dGTP triphosphohydrolase # Organism: Caulobacter vibrioides # 56 360 12 391 394 145 32.0 1e-34 MSEVGERARAWALTMAGHRGFDDIVHAHPSSTARIDIGEVVGREAREERENLLLRPGATR ARGAGNRAVAEDPDPERTCFERDRDRIVHSTSFRRLAGKTQVVVHPTDHQRTRLTHALEV AQVARSIAAGIGANITLADAMALGHDCGHGPGGHASEQAFDAFIPEGFDHGPWGADVSLA SLNLCAETLDGIRNHSWSHPAPGTVEGEVVSFADRIAYCAHDLEDAIKAGIVTVKELPQV VTEVAGTDRRTQLSVFIRCVIDTTCATGRVGMSADVAEALAALRAFNYERIYTRPESLGQ AEAVVEVLHGLVAYYQGHIDQVPTEFLETDADRIHQVVAYVGGMTDQFAFSHAAELLGWD RRRLPRGMGRGF >gi|302034473|gb|GL383162.1| GENE 362 362766 - 363995 447 409 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148828154|ref|YP_001292907.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae PittGG] # 42 345 4 304 326 176 34 1e-42 MRVVISRCATGAGTTVSAQPDCHAYHGLVFSDPLTLIAPSGGTVSVDTPVVLAPMAGVTN AAFRQLCAEQGAGLYVCEMITSRGLVYGDHKTHGMLAFAECEDVRSVQLYGVDPGMVGEA TSILCEKYGVNHVDLNFGCPVPKVTRKGGGGVLPWKLDRFAAVVSAAVQAGDAHGVPVTV KTRIGIDPEHITYIDSARAAVDSGAAAVCLHARTVAEAYAGHSHWDAIGELVKTVDVPVI GNGDIWEASDATAMVGQTGCAGVEVGRGCLGRPWLFRDLADAFAGRDTTTLPTLGEVCAM IRRHAELLVKYQGMHGLVDMRKHMAWYLKGFPVGGETRHVLGQISSFDELDSLLATLDHD APFPIKELGKARGRQGAPRRKVVMPHGWLDTHTLDDDDLSAAEIDASGG >gi|302034473|gb|GL383162.1| GENE 363 364049 - 365815 1147 588 aa, chain + ## HITS:1 COG:SMc00166 KEGG:ns NR:ns ## COG: SMc00166 COG0778 # Protein_GI_number: 15965594 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Sinorhizobium meliloti # 50 247 26 224 227 170 41.0 7e-42 MIIPDENPSTSRRWDRPIPRIGDTTSSATRAAAPTGWSLGDQVQQGLDTAIDTRRDIRRY RHDGVPKELVNTVLWAGHRAPSVGHSQPWRFIVVRDADIRDRAAVMADRERLRQAELLTP DRRAHLLDLQLEGIREAPVGIVVACDRRAPASGVLGRNTFTDADMWSCACAVENMWLTAR AHGLGMGWVTLFQPEELAELLHLPNDVETLGWLCLGWPDERPPAPGLERRGWSRRVPLSD VTLADRWPDSAQPEAPVSALRQTLHSPNRYQVVAAHDDADQLLTPPGSLGLLDQTLDRVE AAGGTEITGGTLVLVGADHPVAHLDVTAFEASVTHDVMAASVAGTGLGVSTATAAGLSHL VVDAGVAQPVQGARSVRIRGERGDLRHADAMTPVQVEALLRDGQALGAEASHDGLVCLGE VGVGNTTIATALACAMTGLGPDEAVGLGAGSDTAMVERKAEIIKAALTRTHTDPNDPERL LAALGGPEFAVLAGVCLGAAEAGSPVVLDGLATSVAALIATKFSPGLHGWLVASQASREQ VHHIVLAELGLEALMELRMRAGEGVGACFGAQMILTGLQVRRTAARTC >gi|302034473|gb|GL383162.1| GENE 364 366014 - 366772 526 252 aa, chain - ## HITS:1 COG:Cgl0368 KEGG:ns NR:ns ## COG: Cgl0368 COG0479 # Protein_GI_number: 19551618 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit # Organism: Corynebacterium glutamicum # 1 246 1 246 249 293 55.0 2e-79 MRVELDIWRQNGPDAKGHFEHHVVEDAEPEWSLLELLDRLNDQIVENDGDPIVFESDCRE GVCGCCGFMVNGKPHGPLPNTPACRQHLRAFPHITHFKIEPFRSAAFPVIRDLAIDRTSM DHLIQAGGTVDVMTGTAPDADSVPQPHAEAEQALDFASCIGCGACVAACPNGAAMLFAGA KLSHLAMMPQGRQERSKRARRMINALDEEFGPCSLYGECVEACPVSIPLVAVARVNRERW RAGFRGAGSKDN >gi|302034473|gb|GL383162.1| GENE 365 366769 - 368901 1513 710 aa, chain - ## HITS:1 COG:Cgl0367 KEGG:ns NR:ns ## COG: Cgl0367 COG1053 # Protein_GI_number: 19551617 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Corynebacterium glutamicum # 73 710 25 673 673 785 61.0 0 MNNWIEAVKKPLEMITGRHAGARPEEPGAELVKPEQLQPRRAESSSVARRAAKGPKARDI LGPAQKKAGYLVGDELDGKAPEGDPLTAWTRRQSEYKLVNPANRRKMNVIVVGTGLSGSG VAATLGQLGYHVDVFCFHDSPRRAHSVAAQGGINAARARKVDGDSLKRFVKDTVKGGDYR GREADVVRLGTESVRVIDHMYAIGAPFAREYGGQLATRSFGGVQVSRTYYTRGETGQQLE VACSQALQAQIDAGSVTMHNRTEMLDLIVADGKAQGIVTRDLLTGEIKAWTAHVVILCTG GYGSVYHWSTLAKGSNATATWRAHRQGAYFASPCFVQFHPTALPVSSHWQSKTTLMSESL RNDGRIWVPKKAGDDRPANDIPEEERDYYLERKYPAFGNLTPRDVASRNARTQIESGHGV GPLKNSVYLDFRDAIERLGKKTIAERYGNLFDMYLDATGENPYEVPMRIAPGAHFTMGGL WVDYDQMSTIPGLFVGGEASNNYHGANRLGANSLLSASVDGWFTLPLTVPNYLAGFVGKP VLPLDAPEVSAAIERVQKRTDALLNCGGTHRPEWFHRKLGDILYEGCGVARDEAGLLDAL TKVRELREEFWRDVKVVGTGNRLNQELEKAGRVADFIELGEVMILDALDRRESAGAHFRN EYATEAGEAKRNDGDWCAVSAWETRPDGTKVRHSEPLSFSLIDLQVRDYR >gi|302034473|gb|GL383162.1| GENE 366 368898 - 369668 566 256 aa, chain - ## HITS:1 COG:no KEGG:PPA0950 NR:ns ## KEGG: PPA0950 # Name: not_defined # Def: putative succinate dehydrogenase subunit C # Organism: P.acnes # Pathway: Citrate cycle (TCA cycle) [PATH:pac00020]; Oxidative phosphorylation [PATH:pac00190]; Butanoate metabolism [PATH:pac00650]; Metabolic pathways [PATH:pac01100]; Biosynthesis of secondary metabolites [PATH:pac01110]; Microbial metabolism in diverse environments [PATH:pac01120] # 1 256 1 256 256 455 100.0 1e-127 MSVPDVRDRRDLERGGDAVAVHTHSAARPSNVTLKLIMAITGTIFALFVFVHMVGNLKAF MGPGDYNAYAEFLRTVLYPLFPVGGVLWCFRIVLLVCLVLHVWAGLTIWVRGRRARGRFS RHNMKALGWGARTMVLSGIVILAFVVVHILDLTLGMGVQSSSFRAPVNEGTPDIHITAYQ NLVASLSRPWMAIFYTVVMIIIGLHIAQGVRNTINDFGGTGRRLRAIWTVIGLLIALAIV VCNGALPMLILAGVIS >gi|302034473|gb|GL383162.1| GENE 367 369808 - 371328 1442 506 aa, chain - ## HITS:1 COG:MT2426 KEGG:ns NR:ns ## COG: MT2426 COG0423 # Protein_GI_number: 15841869 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase (class II) # Organism: Mycobacterium tuberculosis CDC1551 # 50 505 9 462 463 743 75.0 0 MRSVVTVKLVNGLAAQICSVGGAARVGAIRVSTPMRTWKKGTAVASTSTLDNVINLCKRR GFVFPCGEIYGGTRAAWDYGPFGVELKENIKRQWWRAMVTRRDDVVGLDSSVILPREVWV ASGHVGVFNDPLTECLSCHKRMRADHLQEGHAAKHGIADPDSISLEEVNCPNCGNKGQWT EPRDFNMMLKTYLGPVEDKSGLHYLRPETAQGIFVNFQNVLTSARKKPPFGIAQTGKSFR NEITPGNFIFRTREFEQMEMEFFVEPGTDEEWHQYWIDVRTAWYTDLGINPDNLRHYEHP KEKLSHYSKRTVDVEYKFGFSGSDWGELEGIANRTDFDLGNHSRHSGKDLSYYDQANNKR YLPYVIEPAAGLTRSLMAFMVDAYTEDEAPNAKGGVDKRTVLKLDPRLSPVKAAVLPLSR NSDLSPKARDLAARLREHWNVDFDDAQAIGKRYRRQDEIGTPFCITVDFDSLEDDAVTIR ERDTMAQQRVSIDKVEEYLGGKLLGC >gi|302034473|gb|GL383162.1| GENE 368 371421 - 371837 297 138 aa, chain + ## HITS:1 COG:MT2428 KEGG:ns NR:ns ## COG: MT2428 COG0735 # Protein_GI_number: 15841871 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Mycobacterium tuberculosis CDC1551 # 7 131 7 130 130 125 48.0 2e-29 MVENRRRTTKQRLAIRALFDDEPFFLTAQQVHDQLRNRGDQVGLATVYRNLQTMAEDGEL DAIRAEDGEMTYRRCSSAHHHHLVCRNCGKAVEIGPEKILEDWTRDIAAKYEFSETGHEL ELFGICSECSAVHTRSVS >gi|302034473|gb|GL383162.1| GENE 369 371838 - 372509 503 223 aa, chain - ## HITS:1 COG:CAC1455 KEGG:ns NR:ns ## COG: CAC1455 COG2197 # Protein_GI_number: 15894734 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Clostridium acetobutylicum # 3 217 2 218 225 139 34.0 4e-33 MSVRLVVTDDHPIMRQALAGYFSRVEEMEVVGQATNGREAVELVDQLLPDVVLMDLKMPE MDGLTATRMIVSRHPSVRVVALTTFARRDIVVEAILAGAAGYLLKESEPEAVIAGVRAVM AGQVTVSPEIARGVVEVFSARPCGGGSHQIDLTPVKLSDADDDVLKLLAEGLSNAAIADE LCLSESAVKQRLGHLAKKLGVRSRLEVLVRACELGLVIPRLRR >gi|302034473|gb|GL383162.1| GENE 370 372853 - 373038 177 61 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4002 NR:ns ## KEGG: HMPREF0675_4002 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 61 3 63 63 109 100.0 3e-23 MKKIITGIVAVLAISSFSVAVPAQATTDSAPTQNAVNTQPKAHVKGIIDGLCTLYPDWCF N >gi|302034473|gb|GL383162.1| GENE 371 373092 - 374255 526 387 aa, chain + ## HITS:1 COG:no KEGG:PPA0945 NR:ns ## KEGG: PPA0945 # Name: not_defined # Def: putative histidine kinase # Organism: P.acnes # Pathway: not_defined # 1 387 1 387 387 629 99.0 1e-178 MNSGSPGRSFIFKKSSRTTVVTAITIAVLVLSGLDDLRVAVVTHRSDSATVWMVVVYVFS MAALLCWKHPLVQELLLLVGLVSSAIAGDIAFSIPLLVVLAFLASQHGLKRHCIPLIIGA TVIAAMAAVYTERWGSIFLVACLACAIGIGFGSAFRWLDNRREQAEEQAADALQQAAHAR EEERQQLAAELHDVVAKDLTVITMLAGSLRLNTANEDVITASKSIENTSRAALDDLQRLL LVLRNRNLPFISSPTHEDSVEATVAAMVTRLETLGWHVESSVACAPMPVSVSDAINRILD ESTANVIKHNGPATARITVMDEGDDVVVTVSNPTTDPEIEPVRSTGMGIARLKERVSLLR GKISIGLRNGWWVVNARIPRAKPVRET >gi|302034473|gb|GL383162.1| GENE 372 374353 - 375093 448 246 aa, chain - ## HITS:1 COG:MT2431 KEGG:ns NR:ns ## COG: MT2431 COG1381 # Protein_GI_number: 15841874 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Mycobacterium tuberculosis CDC1551 # 1 246 1 242 265 234 48.0 1e-61 MPTYRDQAVVLRTHKLGEADRIVSMLSREHGKIRAVARGIRRTSSKFGARLDPFNLVDLQ LVQGRNLDVVAQVECLHPYSAPLRQDYSLFTAAEVMVEAADHLVPVDREPAPAQYRLLAG ALRVLGQGTTDGPRPPEMVLDSYLLRSLSASGYAPDLVDCVRCGTPGPHQGFSPSLGGVV CINCQPPGTPHPHEETISYLRALLVGDWTATRDVAWSRVREGSGLVAAFVSWHMDRGLRS MPLLER >gi|302034473|gb|GL383162.1| GENE 373 375216 - 375881 599 221 aa, chain + ## HITS:1 COG:no KEGG:PPA0943 NR:ns ## KEGG: PPA0943 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 221 1 221 221 385 100.0 1e-105 MDSFVALLGSVWYLVLVAAISPVMILNANAAVHGQKQNHGWAFVSGAGLVLGAIGVTSFG LLGSAATDFASRQLASRTVDRVLGVLLFLFGCYLARTKWVSHRVQKSRVKKTSGPRSAGA HGMFTWGALGMATNFTTIPLFISSSQRIGTADLPLVVRILTLIISWWIVLIPAWLPVVID RLRPNSSGISGRTRERISHWTSVASIIACLGSGIIIVWTTL >gi|302034473|gb|GL383162.1| GENE 374 375983 - 376789 675 268 aa, chain + ## HITS:1 COG:Cgl2231 KEGG:ns NR:ns ## COG: Cgl2231 COG0020 # Protein_GI_number: 19553481 # Func_class: I Lipid transport and metabolism # Function: Undecaprenyl pyrophosphate synthase # Organism: Corynebacterium glutamicum # 23 259 7 243 243 348 69.0 4e-96 MARITPRPPKRGPLPHPSGARPPELPPELIPQHVAIVMDGNGRWARQRGLRRTEGHARGE DALFDVIEGAIEMGIPYLSAYAFSTENWKRSPDEVRWLMGFNRDVIHRRRDQLDAMGVRI RWAGRRPKLWKSVIKELESAEKQSTDNTVLTLQFCVNYGGRAEIVDAVRDIARLAAEGKI DPDHITEKTFRTHLDEPEVPDVDLFWRSSGEQRTSNFLLWQSAYAEMVFSDVLWPDVDRR DLWAAVVEYAKRDRRFGGAVPYEVNPTP >gi|302034473|gb|GL383162.1| GENE 375 376798 - 378543 1307 581 aa, chain - ## HITS:1 COG:ML2324 KEGG:ns NR:ns ## COG: ML2324 COG0119 # Protein_GI_number: 15828249 # Func_class: E Amino acid transport and metabolism # Function: Isopropylmalate/homocitrate/citramalate synthases # Organism: Mycobacterium leprae # 10 572 39 604 607 627 56.0 1e-179 MTHIQPRPCQLTSPMPSGRYKPFVPHKLPDRTWPDKTLGDAPRWLSTDLRDGNQALVDPM TPARKMRMFELLVGMGYKEIEIGFPSASQTDFDFVRQVIESGIVPDDVTISVLTQAREDL IERTMQSLVGAHRATIHMYNAVAELFRRVVFNIDEKQCIDLAHRGTEWVVRYADKYLGDV EFGYEYSPEIFSQTRTDFAIEVCHSVMDVWQPGPGREIILNLPATVEMGTPNTYADQIEY FCRNIRDREHVCVSLHPHNDRGTAIAAAEFAQMAGADRVEGCLFGHGERTGNVDLVTLGM NLVSQGVDAGIDFSDMPKIRRTVEYCTGLPVPARQPYAGDLVFTAFSGSHQDAIKKGLED LERQAQEQGIGIHEVDWQAPYLTIDPHDVGRTYEAVIRVNSQSGKGGMAYLLKTEHQVDL PRRLQIEFSGAVQNYTDDQAREISHDEIWDLFNREYLQVPGIKLVSRMTSTETGTHQLTA NLRIDGEDVQIRGEGNGAVSAFIDALASLDIVVQVLDYSEHAMTAGGTAKAAAYVECEIG DGETSQILWGVGIDPDIAQASLNAVVNAVNRSRRQTLDRES >gi|302034473|gb|GL383162.1| GENE 376 378745 - 380235 721 496 aa, chain + ## HITS:1 COG:PAB1657 KEGG:ns NR:ns ## COG: PAB1657 COG1574 # Protein_GI_number: 14521281 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase with the TIM-barrel fold # Organism: Pyrococcus abyssi # 23 448 23 442 476 152 28.0 2e-36 MLLLHNARILDLTDGSTGKPTDVLLSDRVLALGPEAQQQAHSARVRSIDLGGRLLMPGLW DEHVHVGQWALASRRFLVSQTASCETVLEEVATHVKRSEGSDEPILQGFGFRPSLWGSNP NARQLDAVTGDRAVILVSADLHSSWCNTAAMRKLGIEGDGFLREQTSFDVQTQLSQVNPH VLDGWVGSCSTAAARLGITGIRDMEFSTDVETWLQREADGRCPLRVEVSVYPERLDEAIA QGLATGQAPVTDKPGPSRVAMGPLKVIVDGSMSTRTAWCMDSYPAGAGPDGAGIDSVTPE DLVDLINRAKTGNLQCAAHAIGDRAAKEVLNAFEVTGISGSIEHAQVLTDADVRRFAALG VRASVQPLHLVDDRDATDVMWSDRADRCFRFADMVRAGTELALGSDAPVSPVDPWGAIRV AVERTGDRRPSWHPEQALTLSQAITASTRHVTQVVTGGPGDVIAVAHNPFDLSGDALAGL TSDLTVVGGEVTAAAL >gi|302034473|gb|GL383162.1| GENE 377 380264 - 381286 849 340 aa, chain - ## HITS:1 COG:ML0631 KEGG:ns NR:ns ## COG: ML0631 COG1159 # Protein_GI_number: 15827260 # Func_class: R General function prediction only # Function: GTPase # Organism: Mycobacterium leprae # 36 340 4 302 302 335 58.0 7e-92 MSDDEMPSLADLMDGDDEDISDVDYVTARVAESTRAGFHSGFVCFVGRPNAGKSTLTNAL VGSKIAIASSKPQTTRHVIRGVVTDEKSQIVVIDTPGLHKPRTLLGQRLNDLVFDTWTQV DVIGVCLPSNQRIGPGDTYLVSEIAELPRRPTLIALATKSDLVSKARMAEHLAAIDKLQG EVGIEFVEVVPCSAVSGEQIDEVRDVIASLLPEGPAYYPDGEVTDEPTETLVAELIREAA LEGVREELPHSLAVEIVEMGPREGQPEDRPLLDVYASLIVERDSQKGIMIGHHGSHIKQV RTHARRQIAALLGTPIHLDLQVKVLPNWQSDPKYLNRLGF >gi|302034473|gb|GL383162.1| GENE 378 381279 - 382577 1037 432 aa, chain - ## HITS:1 COG:Rv2366c KEGG:ns NR:ns ## COG: Rv2366c COG1253 # Protein_GI_number: 15609503 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Mycobacterium tuberculosis H37Rv # 12 432 10 430 435 364 47.0 1e-100 MTRQEWIVLAIAFIFTVLASLNVAMETALQHMSHSKAEELAADGKAAHQRVLDMVADPAP FINTAMLVRVISEVTATALVALLIFGHFDLPWQQVLVVVAIMVLVDFLTWGVAARTLGRQ HDTAICTFWSRPWGVLAHVLGPIAALLILIGNALTPGKGYAEGPFTSEAELREMVDYAEA SDLIEAGEREMIHSVFELGDTLTKEVMVPRTDVVYIPRTKNLRQAMSLALRSGFSRVPVV GEGFDDIRGIVYLKDLSQRVLDNPDGYATESVESIMRPAALCPDSKPVDQVLREMQRDRN HLVIVVDEFGGTAGLVTIEDIVEEIVGEIVDEYDAEPTLTEEIEDGVFRISSRLPVDDLG ELFDLKVDDDDVETVGGLMAKELSVVPIPGSVIIWEGLEITAEKATGRRHQVDTCLVKRA PEETPDQEYDDE >gi|302034473|gb|GL383162.1| GENE 379 382574 - 383041 427 155 aa, chain - ## HITS:1 COG:Cgl2235 KEGG:ns NR:ns ## COG: Cgl2235 COG0319 # Protein_GI_number: 19553485 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Corynebacterium glutamicum # 2 153 3 158 196 124 47.0 6e-29 MIDITNESGSPSNEEGLVGLATFALDWLRIHPSSELSIILVDEETMEAYHEKFMGLPGPT DVLSFPMDEMRAPGDDEDPPSGLLGDIVLCPTVTARQAAENGRTPDGEAEYLLIHGLLHL LGHDHAEPGEKRVMFRLNDEIIAAWDDHREQTGQR >gi|302034473|gb|GL383162.1| GENE 380 383038 - 383982 839 314 aa, chain - ## HITS:1 COG:MT2437 KEGG:ns NR:ns ## COG: MT2437 COG1702 # Protein_GI_number: 15841880 # Func_class: T Signal transduction mechanisms # Function: Phosphate starvation-inducible protein PhoH, predicted ATPase # Organism: Mycobacterium tuberculosis CDC1551 # 1 295 32 328 352 395 69.0 1e-110 MVTLVGPNDEFLKRLEDALDADILVRGNEIHLAGHPADLADAGDILSEMITIIRTGQGLS ADDVDRVVAMTRNGEGPAEIMTADILSNRGRTVRPKTLNQKRYVDAIDANTVTFGIGPAG TGKTYLAMAKAVQALQTKQVSRIILTRPAVEAGEKIGYLPGTLSEKIDPYLRPLYDALRD MVDPDTVPRLVGAGTVEVAPLAYMRGRTLNDAFVILDEAQNTSSQQMKMFLTRLGFGSKI VVTGDITQVDLPGGMKSGLRVVQGILDGIDDIAFCNLTSRDVVRHRLVGKIVAAYDVACE SRGAKNSRKNRKTR >gi|302034473|gb|GL383162.1| GENE 381 384325 - 385284 276 319 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3991 NR:ns ## KEGG: HMPREF0675_3991 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 319 59 377 377 628 100.0 1e-178 MSHNSGGLGIVREIAGLGCLPEAPRLYAADLSLGVVVMGDVSGMTLESILTGNDPSAALI AAQMWGRATATVMAASMREMSDRAARDEVIPAFQDTIRRLDPQTRSAGGPASPRLPGRGL EKMCAALETEVPDDAELDLFESLRGAEGTEVVTQADPCPGNVLVTEDHARFVDYEATSIH HPAVDVVNLVMPWSSCDGLVGVPAEFLDAVREGFLDGSRYAGSWLADEPMIGLAGTAATL QLTELSLDSLRRHHPNQRGDMARRAMVHRWTWAATHGVLTPIIADLCGRMAHRAVQDWGW SKHLTVANCFSHEKLRNQR >gi|302034473|gb|GL383162.1| GENE 382 385304 - 385717 303 137 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3990 NR:ns ## KEGG: HMPREF0675_3990 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 137 1 137 137 265 100.0 5e-70 MSARKEFGGVITFIVHPDFIRDNRFYPVIPKTIQMVINEAATRPEKLYFIDQDTSAPVKN TDSEMLVMDVSVFTVGRNLDNLVVMINLGKYWGSGPDDVPRAVIRTLSRPLSAIMFEEIP EPPLDKNEEGYYSFILT >gi|302034473|gb|GL383162.1| GENE 383 385771 - 385920 68 49 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSKSSRFDREYSIKSTGLGPRHAWATIHRSANSSHTFTSSEAINGSNAE >gi|302034473|gb|GL383162.1| GENE 384 385851 - 386858 1001 335 aa, chain - ## HITS:1 COG:XF1510 KEGG:ns NR:ns ## COG: XF1510 COG0596 # Protein_GI_number: 15838111 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Xylella fastidiosa 9a5c # 14 332 2 312 313 334 53.0 1e-91 MTLATSELDITPHRDLYPPIEPYNTQMVDVGDGQQLYVEQCGNPEGKPVVFLHGGPGGGG GTERRRFFNPDAYRIIILDQRGCGLSTPHIAQAHTPREMATNTTWKLVEDLEKIRELLGI ERWEVFGGSWGSCLSLAYAETHPERVTELVLRGIFTMREQELDWYYNFGASEVFPELWNK FCEPLRRVGHDFSRDNIAAYYDLLWDDDPDVHGPAAVAWTTWEGVTTSLSFDPSHIEEFS DPNFALAFARIENHYFVNHGFMVEGQLLRDAHKLADIPTVIVQGRYDMCCPDVTAVDLSR ALPSADLRIVMAGHSAFEPLIASELVKVCDEFAER >gi|302034473|gb|GL383162.1| GENE 385 386830 - 387648 729 272 aa, chain + ## HITS:1 COG:Cgl0234 KEGG:ns NR:ns ## COG: Cgl0234 COG1738 # Protein_GI_number: 19551484 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 57 260 43 243 250 179 44.0 5e-45 MSSSEVARVTETSCGHDRHLDDMRQHGYHFAVTSHSTSLKSSAASRPAYADRGSGHYDIL LTLMCVVVILSNIGGSKGVQLGPITTDSGFFLFPLAYVMGDITTEIYGIKAARRAIVMGF ICAILSVLCFWAIIALPGFTDTYSVAHDTALKMALGPLWQMVLAGACGFLAGQFTNSVIM VRLKAKWLERGLVGRLMGSTGAGEAVDTIIFCAIAAPVVGITSFGQWCNYAFFGFLWKTL VEYACIPITTRIIAWIKKHEPSYQERLAVARN >gi|302034473|gb|GL383162.1| GENE 386 387830 - 389041 861 403 aa, chain - ## HITS:1 COG:BS_yhaP KEGG:ns NR:ns ## COG: BS_yhaP COG1668 # Protein_GI_number: 16078054 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: ABC-type Na+ efflux pump, permease component # Organism: Bacillus subtilis # 19 393 15 408 419 119 27.0 1e-26 MTNTSSAWRLVASREVDVKLRDKGFIISMIITVLLIVAISVVLSIISSKHDHDSVVVTDD KAAAIVKVAQQDLAARGSTDKTEVVRAADEAEAHRELQNDDNMVYLHQKDGQWHLDGYDK TPSADGSSTGAMERAVAVAAVADNTKAAGVDASTMTKGMSLQTGQVKPSDGTSEAVGYML AIVFSVLFMMSAIYYGVMIANSVVEEKQSRIVEILLTGVPARQLLIGKIVGNTVLAVGQL IIICGLSMLAVSFSQWSNIITFAMSWSVMWFLLFFLVGFVALASLYAAAGSMASRSEDVQ NTTSPLMYLIMIIYFWVVFSMSNPDGMSAKIGSYVPIASVVFMPLRMLGHRAQWWEPIVS IFVTLGFTVFAVLAGERIYRRSILQTNGRVSFKNAWKQNESVA >gi|302034473|gb|GL383162.1| GENE 387 389038 - 389970 265 310 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 13 265 4 261 305 106 27 2e-21 MIDTDMCHREPVSVRVEELIRAFEDLVAVDHLNFDIPAGRMTGFVGANGAGKTTTMRMIV GVLKPTSGQVLWSGRPITAEDRRTIGYMPEERGLYPKQPVIDQLVYLARIKGASTQTART EAMEYLDRFGLADHAREQVQKLSLGNQQRIQVTASLLADPAVLILDEPFSGLDPVAVDAM ADVLREKTAQGVPVLFSSHQLDLIDRLCDRMVILHKGRMVANGTTEELREVGPRRYRVEA RGDLGWLRSLPGLTVVDVDGTTAVIEFPDPNQIDRLLDVIVTESMNRGGLVELTHIRPSL GEIYREAAQS >gi|302034473|gb|GL383162.1| GENE 388 390055 - 390711 674 218 aa, chain - ## HITS:1 COG:all4635 KEGG:ns NR:ns ## COG: all4635 COG2197 # Protein_GI_number: 17232127 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Nostoc sp. PCC 7120 # 1 204 2 208 219 177 45.0 1e-44 MRVVLVDDQKLVRQGFRLILAVEPDITVVGEATNGAEGVDVVKETAPDVVLMDVQMPVMD GVAATAKIREFSDVKVVILTTFDRDDYLFDALDAGASGFMLKNADAESLVAGLRQVADGH ALLAPEVTRRVIARSVHQGGTVTGSKAEQLTAREIEVAKLVARGLSNAEIAEELVVSAAT VKTHVSNCLMKCDLRDRVQLVALAYESGLIRVGEPSRD >gi|302034473|gb|GL383162.1| GENE 389 390711 - 392060 833 449 aa, chain - ## HITS:1 COG:CAC2940 KEGG:ns NR:ns ## COG: CAC2940 COG4585 # Protein_GI_number: 15896193 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 119 432 78 390 402 89 26.0 1e-17 MPLVTLGGVRESIVSFMAMDDLWRRRVPEHKGWQIPVVWFLPAVDVLVGALVALAVGAGG LLLAALQDHLDTLGPGDVIVVIVLAVALSFRRVMPITSAAVMTLVWINGTYATPYMATNW VSTLAFFFSYYSLMVWVRTRRIAWGSMLAVFVVIMGWVAMMMAFGRSLTEQLKIINPDSN GEGVIYLVLTYVIVNVTFVVGAALVGQVSWLWARDLAEVRRQAATIERQRTQLAEQAILD ERLRIAREMHDSMAHHVSVVGIHAAGARRAFDVDPDLAREALATVEVESREAVTEMRSLL GSLRAGDEPRARLSLADLDRLCNEPRRASVRLLRVGDDSLVGPQLGHTCYRIVQESLNNV EAHSSASEVTVSVRCRDDEVEVEVTDNGRPIRSAPSTEVGIVGMSERVKALGGTIEVGPR KIGGWRVRAVIPMRRGENVRDEDMKEGED >gi|302034473|gb|GL383162.1| GENE 390 392108 - 393349 1000 413 aa, chain - ## HITS:1 COG:Cgl0233 KEGG:ns NR:ns ## COG: Cgl0233 COG0343 # Protein_GI_number: 19551483 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Queuine/archaeosine tRNA-ribosyltransferase # Organism: Corynebacterium glutamicum # 16 405 21 415 418 493 60.0 1e-139 MTFGFEVTSRLDNACGRTGLIHTPHGAIQTPAFVVVGTKATVKALLPESVVQLGAQAVLA NAYHLFLQPGPELIDEAGGLGQFMNWTGPTFTDSGGFQVLSLGAGFKKTLAMDVSQLTEA DVIAADADRKAMVDDDGVTFRSPLNGDLHRFTPEVSIGIQHHLGADIMFSFDELTTLMNT RAYQEEALERTRRWAERCLAEHRRLTEVRSGKPYQALFGVIQGAQYQDLRRRACRDLAGM EIDGQCFDGFGIGGAIEKANLGRIVTWCAEELPEDRPRHLLGISEPDDLFAACRAGADTF DCVNPSRVARNAAIYTVDGRYNVDTARFRRDFGPLEDDCDCYTCTHYSRAYIHHLFKAKE LLANTLATIHNERWTVRLVDQIRGAMCSGDLDAFETEFMGRWNANGGRLAKVN >gi|302034473|gb|GL383162.1| GENE 391 393436 - 394287 704 283 aa, chain + ## HITS:1 COG:DR1295 KEGG:ns NR:ns ## COG: DR1295 COG5006 # Protein_GI_number: 15806313 # Func_class: R General function prediction only # Function: Predicted permease, DMT superfamily # Organism: Deinococcus radiodurans # 11 272 27 287 302 142 44.0 1e-33 MVAFVRGAILVFMAILSVQFGGAFAATLIPHVGALGTVALRMSLAALVLAPIFRPHVKGH NRVDWTRVLALTIALAGMNTVFYFSLERLPLGVAVTAEFLGPLGMAALGSRSLRDWLAIL LALCGVVAVSGALTADWAHLDLLGLVLALVAGVFWALYAKSAQLVGMSWSKLEGLWWAIL LSSVVLVPFGFATAGTRLVEPYHLLTGAVVAVMSSALPYSLEMYALRHIDTTVYGILTGV EPAVAAAAGFFILGQNLTGSQMLGMAFVVTAAWLVMAGGRQRE >gi|302034473|gb|GL383162.1| GENE 392 394330 - 395547 977 405 aa, chain + ## HITS:1 COG:TM1629 KEGG:ns NR:ns ## COG: TM1629 COG1207 # Protein_GI_number: 15644377 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) # Organism: Thermotoga maritima # 13 228 230 420 445 70 29.0 7e-12 MDVNSRVLEPRGLEKVAKLIDRGVRIPNPLTVDIDEAVDIDNISSDGVVIGPGCRIRGRR TVISAGCILGDEAPMTIQDCQLGTGVKLKGGFAQDAVFLDGASMGSGAHVRGGTILEEEA NGAHTVGLKQTILMPFATLGSLINFCDVLLAGGTSRTNHSEVGSSYIHFNFTPDGDKTTA SLFGDVPRGVLLDRHPIFLGGQGGAVGPVATGFGTVVGAGSILRDDVPEDDQLVLPAPPA TRQRPVAPNSYSKLNRIIAHNVSYLGNLSALEAWYRQIRRLFMSHDRLSGLVWQGALDNL VSARKERVKRLKSLIGKVQPTDAGRAQLIDNRDAFLSSLETADSPAPAEIVRLCGAAANS GANYLDVIQSFDEAARNQVVEWLGTIVTAQQDRAQEVVDQLPLPF >gi|302034473|gb|GL383162.1| GENE 393 395630 - 397780 952 716 aa, chain + ## HITS:1 COG:Cgl0869 KEGG:ns NR:ns ## COG: Cgl0869 COG0514 # Protein_GI_number: 19552119 # Func_class: L Replication, recombination and repair # Function: Superfamily II DNA helicase # Organism: Corynebacterium glutamicum # 31 713 20 680 683 611 50.0 1e-174 MTTTTDAIPKVDDLRTQGVAILRRLVGRNNADFHPGQWEAIEALVAHHRRALVVQRTGWG KSAVYFVATLLQRAIGSGPTLIVSPLIALMRDQVAAAKRASVRAAAISSANATEWSEIAQ RLDADELDVLLVSPERLVNPTFASRQLPELIKRMGMLVIDEAHCISDWGHDFRPDYRRIR NLVSALPVTIPVLATTATANSRVVQDVAEQIAPSADDVFILRGPLARKSLRLGVLNLPNP SERLGWLVQHLSELPKSGIIYCLTVSTAEDTARALTTAGHNVRAYTGRTDAEARTELEKA LRNNQVKALVATSALGMGFDKPDLGFVVHLGAPSSPIAYYQQVGRAGRATDNADILLLPG PEDPDIWTYFATSSMPTQERADAVLRALAGGQALSISALETRVDIRRSQLELLLKVMAVD GSVVKVRDGWQATGKPWVHDTERYERISQARREEQQAMLGYERSRTCRMTLLTGQLDDPS TTPCGRCDVCAGPWYSVEVDQSAAVRAVQSLNRVGVPVEPRTAWPVGMDALQVALKGRIS AEEIAAEGRVIARLSDLGWGGALRDLLRSDTNGVPIDAEITPALAKACLRVLAEWDWEQR PAAIVRIPSITRPHLIDSLASGIARVGHLQDLGWLDLADGSARLQSSTNSAYRLRDVHDR FSVGPGLMSRLSHLGGASVLLIDDVISSRWTMTVAARSLRRAGSGPVLPLALALTA >gi|302034473|gb|GL383162.1| GENE 394 397942 - 398343 417 133 aa, chain + ## HITS:1 COG:Cgl1340_1 KEGG:ns NR:ns ## COG: Cgl1340_1 COG2259 # Protein_GI_number: 19552590 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 8 130 6 132 142 64 32.0 5e-11 MSLAKFTARSLLSAIFITGGLDEIKKADQLSEAVDGLLSKLPKSSCSQIPDVDSTLLVKV NGATMLAAGSLLALGIKPRLAATVLAAQLVPVTAAGHAFWEKEGAEKQGDQIQFCKNLGL IGSLLTVALDGAK >gi|302034473|gb|GL383162.1| GENE 395 398416 - 398652 60 78 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|328754319|gb|EGF67935.1| ## NR: gi|328754319|gb|EGF67935.1| hypothetical protein HMPREF9579_01988 [Propionibacterium acnes HL087PA1] # 31 78 1 48 48 89 97.0 6e-17 MKAPIFGMIMPARNPPSRWTEARAPCPCRFLWIVASGSDIGTPVCSAADHWQDPHRSVNK SGSVCLCCQGVVLCWFYS >gi|302034473|gb|GL383162.1| GENE 396 398534 - 400441 1531 635 aa, chain + ## HITS:1 COG:VCA1045_1 KEGG:ns NR:ns ## COG: VCA1045_1 COG2213 # Protein_GI_number: 15601796 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannitol-specific IIBC component # Organism: Vibrio cholerae # 17 470 6 478 503 464 51.0 1e-130 MSLPDATIHKNLQGHGARASVQRLGGFLAGMIMPNIGAFIAWGLLTALFIETGWAPNATL AKLVNPILTYLLPVLIGYTGGKIVNGTRGGVIGAIATMGVVVGADITMFLGAMVIGPFAA WLLKQVDKLLDGRIHSGFEMLVDNFEIGILGMALAVIGHLGVEPLVSTLMGWLAAGVGFL VHHGLLPLASLLVEPAKVLFLNNAVNHGIFTPLGIQEAHITGRSILFMVESNPGPGLGLL LAYQFFGSRQIRQSTPGAIIIHLFGGIHEIFFPYVLMKPKTILATIAGGMSGLAIGVAFH AGLVAPASPGSIIAWFLMCQPGHYLAMVADFLVATAVSFVVAMLLIRKNSTQDDVAGEGQ NPTVPTTIGAQAPLTNISKVVIACDAGMGSSVMVASTMKNRLSRYGVEVAHTAVDQIPSD TPLILTQEGLVDRARRRAPSARIVPFTNYMNDPAFDRVETEVRAAHDDAATAPTDNGGLS RASDANSHTHVAISVLPRDAIRLGQRATSKEEAITMAGQVLIDEGAADDVYVKGMLAREK QISTYMGEGVAIPHGVDEVRDHIDKATLGFLQFPEGVEWDGNICTVVIPIASSSDEHLEI MAALARILSNPETARQLREATCTDEVLNLLGSQQA >gi|302034473|gb|GL383162.1| GENE 397 400470 - 401516 956 348 aa, chain + ## HITS:1 COG:alr5117 KEGG:ns NR:ns ## COG: alr5117 COG1063 # Protein_GI_number: 17232609 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Nostoc sp. PCC 7120 # 1 346 1 338 341 171 33.0 2e-42 MKALRFHAPEDVRLEDVPEPECKPDEIKIKVRNCSTCGTDVKILHNGHQNITGVTTMGHE VAGEIVEIGSEVAGDWKVGDWVQSIAAVPCGQCHECRKGWMQVCQNQTSVGYQYDGGFAE YMIVPPQVLKVDGLNRIPDDVDFDEASAAEPFACAINAQEQLGIEKGDFLVIFGAGPIGC MHTRIARGVHKVGTIVMIDINAERLAMSAAAVKPDITIDGSQEDVVAKVMELTNGRGADV IITATPANITQEQALSMAARNGRISFFGGLPKTNPTITCDSNLIHYRQLHIHGANGSAPE HNKRALQYIASGQVPVKDLITRHVKLDDVMTVFDIVAKGEAIKVTVEP >gi|302034473|gb|GL383162.1| GENE 398 401533 - 402273 537 246 aa, chain - ## HITS:1 COG:Cgl2237 KEGG:ns NR:ns ## COG: Cgl2237 COG1385 # Protein_GI_number: 19553487 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 1 241 1 239 241 145 40.0 5e-35 MSDPCFLGEVAAAVPGSVVEITDAEGHHAGSVRRIRVGETVLVTDGQGHAVRGPAIEVTK GSVSVETVEILHTPATTHRWVAVQALPKSDRAELAVATLTEMGVHEILAWQADRSIVRWK GDKQAKGVARWQAAAREATKQSRRFLVPQVELAQTREVVKRICNAQAAYVLHESASEPLV HQELPASGEVIFIVGPEGGITSQEVEAFVAAGARPVTVSDGVLRTSTAGVVGLAQLRAMA NLTVCD >gi|302034473|gb|GL383162.1| GENE 399 402270 - 403448 764 392 aa, chain - ## HITS:1 COG:ML0625 KEGG:ns NR:ns ## COG: ML0625 COG0484 # Protein_GI_number: 15827255 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone with C-terminal Zn finger domain # Organism: Mycobacterium leprae # 1 390 1 375 378 335 47.0 8e-92 MSNDYYEILGVSHDASADEIKKAYRRKAMKLHPDVAGPGSEEEFKKVQEAYEVLQDPQKR AVFDRGGDPNARMGGFGEGGFSSAGFDFTNLVDAMFGGSSPFGSGGGRGPRSRTRRGQDA LVRMRLSLAEAVFGVTKSLEVDTAVVCPKCQGKGAQSGSEPVTCDTCQGRGEVITVQRSF LGDIRTSQPCPTCHGYGTVIPDPCQECSGEGRVRTTRTINVKIPAGVADGNRIHLDSQGE VGPGGGPAGDLYIEMTVSPHDVFTRHGDDLEMVVTIPMTAAALGTKVLMHTLEADREDFA EDTKTVTVEVPAGTQSGTRIVVSERGVPRLRRNGRGDLGVTFIVQTPTKLDSHQKDLLRQ LAEAREETNASASVEKSGGRGMFSRIKEAFGG >gi|302034473|gb|GL383162.1| GENE 400 403452 - 404471 732 339 aa, chain - ## HITS:1 COG:ML0624 KEGG:ns NR:ns ## COG: ML0624 COG1420 # Protein_GI_number: 15827254 # Func_class: K Transcription # Function: Transcriptional regulator of heat shock gene # Organism: Mycobacterium leprae # 3 337 5 341 343 291 51.0 2e-78 MLDDRKLDVLKAIVTDYVSSKEPVGSKALVERHGLRVSPATVRNDMAVLEEEGYITHPHT SAGRIPTDKGYRLFVDRIATLKPLSAPERRAIQAFMTGAADLDDIVRRSVRLLAQITHQV AIMQYPVATTGTIRHLELVSLSTDRILIVLIMSSGSVEQQIVELPGHDEQSLAALRTRLN ETLVGLTVAEAADSLNRFLDDLGPAEGPRAASVIATVLEILAVDPSARVVVAGVPNLTAF GAQWETAVRPVLEALEEQVVLMRLLGEATAGEAGEVTVRIGAENTDVPFQSTSLVASTYG PEDALSSLGVVGPTRMDYPSTMAAVRAVARYVGRFLAEG >gi|302034473|gb|GL383162.1| GENE 401 404616 - 405287 466 223 aa, chain + ## HITS:1 COG:MT1964 KEGG:ns NR:ns ## COG: MT1964 COG0491 # Protein_GI_number: 15841385 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Mycobacterium tuberculosis CDC1551 # 10 216 5 245 250 100 32.0 3e-21 MSTNPETPQWFALTPRVWTTSVEPGSVTCGLVAGEDHVLLIDTGSTPEQGHTLAMSAARM LGRPVDRIVVTHHHYDHSGGLPGITDAEVWMHEAALAHCPDLHVDHPVSLMAYVNLGGLG AEVIHPGPAHTDGDLIVIVRDEKITFVGDLVETAGEPQSDETTDVRGWPRAIDSVITGTD GAGIYVPGHGQPIDATGVMNQRAQLAERIPTNIPLTDRHLPLP >gi|302034473|gb|GL383162.1| GENE 402 405306 - 406067 427 253 aa, chain - ## HITS:1 COG:AGc3406 KEGG:ns NR:ns ## COG: AGc3406 COG0483 # Protein_GI_number: 15889157 # Func_class: G Carbohydrate transport and metabolism # Function: Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 246 3 265 274 128 33.0 1e-29 MSIDVDTVSDLIRDVSARVIDPRFRTLHDHQIHQKKPGDFVTDADRQAECELGAAVTKYA GGIVVGEESAFADPTILDAVSDADLAWVIDPIDGTKNFVHGSVDHGVMLAQLSRGETVRG WIWQPQYGHMWFAEHGAGVTCDGDEVTRGDSHSPVRAATTHEAYKIPSPVVEWRMAKWCC AVDYPLVCQDENDVTVYQHSYPWDHLPGALMVREVGGVVRTVDGAEYGSRETCGKLIVAA DEEAYETVAKLLR >gi|302034473|gb|GL383162.1| GENE 403 406064 - 406861 531 265 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3970 NR:ns ## KEGG: HMPREF0675_3970 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 265 28 292 292 525 99.0 1e-148 MPLELGMVIEDPSSGFVGAVVGWQNGLVVLEDRKGKRKSFPVGPGFWVDGRPVNLCIPPR QGSASIKHTASGSIAGGAEPARVALPSRIYVEGRHDAELVEKIWGDDLRHVGVVVEYMGG MDDLVGIVAEFKPGPGHRLGVLVDHLVADTKESRVADEVRRGGYSEYVMITGHRFIDIWQ AIKPQRIGRQEWPEVPMDEDFKLGTLKRLGLPHTTQADVGKAWQAMLARVRDWHDLDPRF NTEMEKLIDFVTRDHVDELDNEEMA >gi|302034473|gb|GL383162.1| GENE 404 407015 - 408196 641 393 aa, chain - ## HITS:1 COG:MT2457 KEGG:ns NR:ns ## COG: MT2457 COG0635 # Protein_GI_number: 15841901 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Mycobacterium tuberculosis CDC1551 # 8 392 10 389 390 328 49.0 1e-89 MTHADNSLPELHPADGPWSIYLHVPFCASRCGYCDFNTYVLSAMGDDAVAGYLDAAHQEL ELAADALGDAQPPVSTIFFGGGTPTMLSPVQLGELIDHIRTLWGIDPDAEVTTEANPETL SVEVLAGLLKAGINRLSMGMQSADEYVLTVLDRRHRPGRAVEMAQLARQVGFDDVSLDLI FGAPGENFDSWRHSLDVTLTAEPDHISAYSLIVEEGTRLAGRIRRGELPMTDEDDLADKY LLTEKILTEAGYVNYEVSNWARPRSGRDHRCRHNMAYWLGYDWWGIGPGAHSHVAGTRWW NVKHPATYRNVLGDRVLPVDDYEVLGDVQRHEETVLLRLRLADGLPMADLSEVECMRATE VVEQGLGTMEEGRLVLNLSGRMVADRIITDLLV >gi|302034473|gb|GL383162.1| GENE 405 408595 - 408810 122 71 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|315108458|gb|EFT80434.1| ## NR: gi|315108458|gb|EFT80434.1| hypothetical protein HMPREF9602_02058 [Propionibacterium acnes HL030PA2] # 1 71 13 83 83 129 100.0 6e-29 MTGGASDRPTITTPKDLATKLRLQRILPNGCRSHRTDKQVNFANSYGTHILSQPDLADTY SQSMRAWQGHR >gi|302034473|gb|GL383162.1| GENE 406 408871 - 409782 816 303 aa, chain - ## HITS:1 COG:PAE2867 KEGG:ns NR:ns ## COG: PAE2867 COG0365 # Protein_GI_number: 18313648 # Func_class: I Lipid transport and metabolism # Function: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases # Organism: Pyrobaculum aerophilum # 1 303 344 649 670 333 52.0 2e-91 MHEGGPTYPYPDGWWQLIEHYGITSFYTALTAIRTFMCFGDAWVRKHDLSSLRVLGSVGE SINPEAWRWFHDVVGDGTCPITDTWWQTETGMFQITTVPSMPLKPGAVGRSVFGQEAAVV DEEGHELPAGKEGFLVLKNPWPAMMRTLYKDPDRYLEAYWTKYPGVYLTGDSARIDDDGY IWIIGRADDVIKVSGHRIGTAEVESALIFHPAVAEAAAIGLPHEVKRNAIHMVVVLNHSF EPTKNLVSDIRGHVAETLSPIAKPDTIEFVDKLPKTRSGKIVRRVLKARVLGGDEGDLST LED >gi|302034473|gb|GL383162.1| GENE 407 409692 - 410087 229 131 aa, chain - ## HITS:1 COG:sll0542 KEGG:ns NR:ns ## COG: sll0542 COG0365 # Protein_GI_number: 16331700 # Func_class: I Lipid transport and metabolism # Function: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases # Organism: Synechocystis # 6 85 239 316 653 96 57.0 1e-20 MDLTCDHWYDELCKLPIAKGKCETVQVVSEDPLFILYTSGSTGKPKAIVHTHGGYQVGTY ITLKQCFDIKEEDRWWCTADPGWITDTPTSSTARCSTVPPSSCMRAVRRIHTPTAGGSSL STTASLASTPL >gi|302034473|gb|GL383162.1| GENE 408 410147 - 410524 339 125 aa, chain - ## HITS:1 COG:all4257 KEGG:ns NR:ns ## COG: all4257 COG0365 # Protein_GI_number: 17231749 # Func_class: I Lipid transport and metabolism # Function: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases # Organism: Nostoc sp. PCC 7120 # 1 125 89 212 524 145 56.0 1e-35 MDRHLSTARRNNLALIWVGENTDEVRTFSYFALNREVEQMANVLKAMGVRKGDVVTIYLP RIPEIFFAMLACAKIGAVHSVVFAGYSSEALNARIDGSESKVVITVDGSWINGKVFPMKQ IVDES >gi|302034473|gb|GL383162.1| GENE 409 410979 - 411500 571 173 aa, chain + ## HITS:1 COG:slr1461 KEGG:ns NR:ns ## COG: slr1461 COG0705 # Protein_GI_number: 16332120 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein (homolog of Drosophila rhomboid) # Organism: Synechocystis # 5 170 24 190 198 129 46.0 2e-30 MAVVVAIMWILEVIDTMLGNTLDHFGIHSWTGQGLWEIFTAPWLHYGWAHLAGNSVPLFV LGMLVYLESTRTWIVSGLTIMVCSGLFAWCFSAPGTITLGASGIVFGWLAYLLVRGLFTK RLHDILIAIIVFLIYGSVLWGVLPGAAGVSWQAHLGGAVGGVISASRLARHSR >gi|302034473|gb|GL383162.1| GENE 410 411525 - 412514 1013 329 aa, chain + ## HITS:1 COG:MT0573 KEGG:ns NR:ns ## COG: MT0573 COG0447 # Protein_GI_number: 15839944 # Func_class: H Coenzyme transport and metabolism # Function: Dihydroxynaphthoic acid synthase # Organism: Mycobacterium tuberculosis CDC1551 # 2 329 11 314 314 380 59.0 1e-105 MSTLPFVSDTFDAARWRDVDLPGDPLTDMTFHRLVSRGESDHAPAGEDLPVVRIAFDRPA IRNAFRPHTVDELYRCIDAARCTPDVAALILTGNGPSPRDGGYAFCSGGDQRIRGAAGYQ YESQETSGDEDLATDARRERVEKGRLGRLHILEVQRLMRATPKPIIAAIPGWTTGGGHSL MVVADMAVASREYARFKQVDANVGSFDAGYGSALLARQIGDKRAREIFFLAETYDAEQAE KWGVINRAVGHAELENTAIEWGLTIAGKSPQAIRMLKYAFNMVDDGIAGQQAFAGEATRM AYMTEEAQEGRDAFLEHRSPDWSDYPYYF >gi|302034473|gb|GL383162.1| GENE 411 412456 - 413706 808 416 aa, chain + ## HITS:1 COG:MT0567 KEGG:ns NR:ns ## COG: MT0567 COG0318 # Protein_GI_number: 15839938 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Mycobacterium tuberculosis CDC1551 # 84 402 29 354 362 173 42.0 6e-43 MTPSSSTAPRTGPTTPITSEAVVGSELTSRVRVVRVERTREDVDWLAGRLTEVFDGARSV LVPAGGNELPPAVFQDVEDRTVWLPDEVALVMRTSGSTSGTGRLVGLSATQLRASGTATR ERLGWPCTWVLALPPHHIAGLQVVARAVGDGREVVVVEGRLDAPAVAAAVDEAVNRHDDG RVAISVVPTQLSRLLDDPVGTEALTRCAAVLVGGAAASTSLLSRARKAGVPVRVTYGMSE TCGGCVYDGVPLEGVRVDLTDDSRVRIAGPMIMSGYLDEGPVGPWLATQDLGHWQSGRLV IDGRIDDVINSGGLKIAAGQVLDQIRATGMVRDGLVLGLADATWGQVVTAVVVPGRGWRG PEALRDLVGRRLGRTHAPRVIVEVDELPMLASGKIDRVEVRRITTATLESGAAWRV >gi|302034473|gb|GL383162.1| GENE 412 413774 - 414100 96 108 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|328754412|gb|EGF68028.1| ## NR: gi|328754412|gb|EGF68028.1| hypothetical protein HMPREF9588_01893 [Propionibacterium acnes HL025PA2] # 1 48 36 83 83 92 100.0 9e-18 MKFGIVTADEKTAIHVVESIYPKARKRPELTKNGATWAWMRSTNWPSDSTCGKPRWSTMR SISVRREDSTFSDCHGCSQTCSDDEWTHCVITGPPVMCESDRRLSSAA >gi|302034473|gb|GL383162.1| GENE 413 414320 - 415525 767 401 aa, chain + ## HITS:1 COG:STM0595 KEGG:ns NR:ns ## COG: STM0595 COG1169 # Protein_GI_number: 16763972 # Func_class: H Coenzyme transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Isochorismate synthase # Organism: Salmonella typhimurium LT2 # 82 383 76 381 391 150 33.0 6e-36 MLNLLPCSDTVSALPGTAWLDEVLHWVPEGVDPWIWLAPDSDDAPAMVGWGVTRRFTASG HGAVESAWRRMASEGQDLFAFGSFPFSRTQEGFLVVPQVLIRRRHLGGPTEVTNHQRLTR RTWGPEPKKHLTRRPAIDEATWTASVTAVTQQLDHDGQLEKVVLAGAVDITSEVPIDRSQ VASRLAARFPGCWTYSHDGLVGATPELLVDCRDGLFRCRVLAGTRKPAWAHELLDNPKER HEHELAVASVTGRLAQAGLTDPVIRGPFRLELPNVVHLATDVTARVNGSNAARIVDAMHP TAAVCGTPREASYKLIAQIEHLDRGRFAGPVGWMSSDGSGQWALALRCGQFSEDSRQVRM FAGAGILPTSDPAKEWIEVGAKMEAFGDALPNGQVSGTETT >gi|302034473|gb|GL383162.1| GENE 414 415498 - 417024 790 508 aa, chain - ## HITS:1 COG:ML2270 KEGG:ns NR:ns ## COG: ML2270 COG1165 # Protein_GI_number: 15828215 # Func_class: H Coenzyme transport and metabolism # Function: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase # Organism: Mycobacterium leprae # 1 505 1 538 556 258 39.0 1e-68 MNPSTAVARRLVNALVEAGVEHVVYCPGSRDAPIGYALADAETAGWLRVYVRLDERSAGF VALGVGRAGCPAALVTTSGTAVANIHPAVLEADAAGVPLIVLSADRPAEMWHTGANQTTV QTGIFGSAPRLSTDVPAGFPADERLDALVLRAVTAATGALSADPGPVHLNVSFRDSLVPD GPWQPQALVPRRVSSFPTAPTPLVMPARTVVVAGDGAGSLARELAQQGGWPLLAEPTSGS RVGDNALTDYQTVLGSELVDDVEAVLVLGHPTLSRPVSRLLARPDVTVVTDRSRWTDVAG VARVVTGPVELAEIDTDPAWLGRWKDADRPVVPTAKQRLCRDIWWACTTPNAPVLVIGAS EVIRCFDRFAVPGDIAPTALANRGLAGIDGTIATAIGVGLGTGRPVRVVVGDLTFAHDAM SLLLGETEPEPDVQVVVLDDRGGAIFSGLEHAAAPAPVLRRMFLTPQRLDSAALAHALGA SHRRVSPDDLQFLDEPVVGRQVVSVPLT >gi|302034473|gb|GL383162.1| GENE 415 417026 - 417994 366 322 aa, chain - ## HITS:1 COG:ML2268 KEGG:ns NR:ns ## COG: ML2268 COG4948 # Protein_GI_number: 15828213 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Mycobacterium leprae # 7 283 9 282 334 237 52.0 2e-62 MLADRGIDRMLAFAVPLTVRFRGIKVREGTLLHGPEGWGEWSPFWDYDPVESASWLRAGI EGATRRLPVARRDRVPINVTIPVVDADRAGRMAAESACLTAKVKVADPRSDLREDCRRVA AVREAMPDGHIRVDANTAWDVDAAVRAITELDAAAEGLEYVEQPCASVAELAQVRRKVNV PVAADESVRRAEDPLAVARAGAADLLIVKAQPLGGVARALEVIDATGLPAVVSSALDTSI GIGLATYLAAALPSLDHACGLGTIRLFQGDVSASPLLPVDGYLRPRRGEVDVEVEESDTD LCPRWSQRLALTVAALVERERS >gi|302034473|gb|GL383162.1| GENE 416 418030 - 419865 1548 611 aa, chain - ## HITS:1 COG:MT2476 KEGG:ns NR:ns ## COG: MT2476 COG0481 # Protein_GI_number: 15841921 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane GTPase LepA # Organism: Mycobacterium tuberculosis CDC1551 # 9 610 47 650 653 890 73.0 0 MSAPQPGSTDPAVIRNFCIIAHIDHGKSTLADRMLQITGVLDERSARAQYLDRMDIERER GITIKSQAVRMPWEVDGVTHLLNMIDTPGHVDFSYEVSRSLQACEGAILLVDAAQGIEAQ TLANLYLALEADLEIIPVLNKIDLPGAESDRHAAEIAGIIGCDESEVLRVSAKTGEGVSD LLDTIVAKVPAPEGVADAPARALIFDSVYDTYRGVVTYVRVVDGALRHREKILMMSTGAA HEVLEIGVISPEMVPAQGLSVGEVGYLITGVKDVRQSRVGDTVTNASKPSEKDLGGYQHP KPMVYSGLFPIDAKDFPDLRDALDKLQLNDAALVYEPETSTALGFGFRVGFLGLLHMEIV RERLEREFDLDLISTAPSVVHHVLMEDGSTVAVTNPSEYPTSGRIAEVREPIVDATILSP AEYIGTILELCQQRRGVQQGLDYLSSDRVEIRYRLPLSEIVFDFFDQLKSRTKGYASLDY HEAGEQAADLVKVDILLNGDPVDALSSIVHRDKSYSYGVAMAAKLKELIPRQQFEVPVQA AIGARVIARETIRAVRKDVLAKCYGGDISRKRKLLEKQKAGKKRMKVVGSVEVPQEAFVA ALRTGESTEKK >gi|302034473|gb|GL383162.1| GENE 417 419993 - 421906 1033 637 aa, chain + ## HITS:1 COG:DR0933 KEGG:ns NR:ns ## COG: DR0933 COG0366 # Protein_GI_number: 15805957 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Deinococcus radiodurans # 13 631 16 640 644 669 55.0 0 MVADDSLGHVSLDPSTQQSFDLRWEHYLPDLWIGLSRVYGDRADETLQRIRAILLKRCAE RPDDLKRLDEARLLEPDWLQQPTMIGYATYTDHFSGTLKGISDHLDHLCDMGVRYLHLMP LLQPRQGTDDGGYAVADHRTIRTDLGTMDDLADLTATLRAHGISLVMDLIVNHVAAEYEW ARRARAGQQKYRDYFHILSTQDEVDAWEKNLPDVFPDFAHGNFTWDDDCQGWVWATFNEF QWDLNWANPDVFCEFLDLMCVLANRGVEVFRLDAIAFIWKKLGTNCQNLPEIHDITQSLR QAIRIVAPAVAFMADAIVGPDDVTGYFGRGRHWGKVCDMIYHNSLMVQLWSALATRDVSL METALSRTPDKPSTTTWATYARCHDDIGWTVDDADARETGLDPVAHRQFLSDFYSGTFPG SFARGLVFQDNPVTGYRRISGSLASLAGLESALESDDPAGVDAAIARIVMLHIAILGYGG VPLIWMGDEVGMLNDDWQRDPGHADDNRWVHRPMMNWSMVKQAHAEPHSVPGRIWNGVRR AINARHRSPEFHASVDTVVLPSPHRKVIMWGRPHPEGRMIELYNISEHEVWFPMETLRSE LDDVVTELLSGFDYDLTPMNLRLAPYECLWLSDRSQA >gi|302034473|gb|GL383162.1| GENE 418 422027 - 422293 418 88 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50842384|ref|YP_055611.1| 30S ribosomal protein S20 [Propionibacterium acnes KPA171202] # 1 88 1 88 88 165 98 3e-39 MPNIKSQIKRVKTNEKSRQRNKAVKSALRTYVRNFRRAAEAGDVEAATKAARVANRQLDK AASKGVIHKNQAANRKSAISKKLNSLAA >gi|302034473|gb|GL383162.1| GENE 419 422415 - 423437 780 340 aa, chain - ## HITS:1 COG:Cgl2295 KEGG:ns NR:ns ## COG: Cgl2295 COG1466 # Protein_GI_number: 19553545 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, delta subunit # Organism: Corynebacterium glutamicum # 22 336 13 327 331 144 31.0 3e-34 MQTSLAHWRGYRSCGILGQVNSVYGTALLVQGAEALLSDRAVDARIKAARREFPDAELVE LEGREVDAGRFVEATGGSLFSQATIVVVNAVSDLDKDLFDLVATTAANPPDTLCLILVHP GGVKGKGLLTKLTKAKVEIVKADVPKPWAIPDFIVNEARRGHLDMDHDAVNALHQALGND LRTLAAAVGQLASDSPNGRVGAEEVTTYFGGRAEISSFNVSDASLEGRLPDALETLRWAL SIGVQPAAVTAAMARGLRSVGLYLDLRSQRMGDKQLAQTIGVSPWKLKSLNKQARSWSKA GVARAIRLVNTCDAAVKGAAVDPDYALESMLIAIDEARQA >gi|302034473|gb|GL383162.1| GENE 420 423828 - 425570 1226 580 aa, chain - ## HITS:1 COG:ML1624 KEGG:ns NR:ns ## COG: ML1624 COG1061 # Protein_GI_number: 15827856 # Func_class: K Transcription; L Replication, recombination and repair # Function: DNA or RNA helicases of superfamily II # Organism: Mycobacterium leprae # 16 575 34 586 596 369 40.0 1e-101 MASRFTAQGPRMPMRLRTWQREALDSYLATSPRDWLVCATPGAGKTTFTLAVAAHLWQDH VINRVIVVCPTDHLRSQWIAAARGLGLDLRDTTNAEALPPDCHGCVVTYAQVAQKPALHA ARATNMRTLVIFDEIHHAGDVMSWGSGVIEAFSGAVRRLGVTGTPFRSDEARIAHVRYEE VSDGAFESVADYTYGYGDALRDGVVRPVTFATYTGRSTWTDAVGETHTAILGDSELTKAH EEMAWRTALDSDGEWIAHVMAAAWARVSQLRESGTIPHAKVLIPASNQKVAKEYAEVWRD VTGNEPSVILSEDAASAKKLAAYRDNPDKICAVCVRLITEGVDVPDAAVLIYSTTASTPL FFAQMVGRVVRARNRRERATVFLPAVGRLLDLASQMEEVRDHVIGPPAEPDLIEEFDARE RSEPDPNAGTWQAVASDAILGEVIDTYAPSDGGLFALDGLLSPEQERALLARDEKIRAEQ ARRIASARRASKASREAEERQARRDEAVALQRRGGSTIDTISDPREMRREIHRALLDYSR HHDLTPQAGWGQLYREVPGPKNESAPMDLLRTRLEWLHSH >gi|302034473|gb|GL383162.1| GENE 421 425667 - 428021 869 784 aa, chain - ## HITS:1 COG:BH3961 KEGG:ns NR:ns ## COG: BH3961 COG2333 # Protein_GI_number: 15616523 # Func_class: R General function prediction only # Function: Predicted hydrolase (metallo-beta-lactamase superfamily) # Organism: Bacillus halodurans # 516 782 40 293 295 117 30.0 6e-26 MSPSKSHRDDYQRQVVSTPDVRMVPVAITACGMAAVGIGGHRWMILSAGIGCLAAGMIAV KRKAWLVVVSAAVGLTVLMSAGMRDLVVHHIGVAELAQEGAAVTVTGRVAADPRIFEVNG SGGSTVMITLVAHRIVAEAQAIDQSVRIVAMASGSTSGPATTVVVGQQVQVRGLLTPPRE GRAEAAVLKLRAPPRVVAPPGPLDRGVNRFRAGLVSAVAGCPEGQRAIVPSLVVGDTAAV SEEMSEEFRVTALTHLMAVSGANLASTTALLWWIGAWCGLKRRGLRATSVAGVVVFVVVC RAEASVVRAAAMGVVAMAATGVAFDRRGGIRTLAVAVTGLMLIDPWLVGSVGFWLSVCAT AGILWWAQPWSVAMEWAPAWLAVGVTVPWAAQVTTQPVITWMAGTVSTTGLVANLAAAPF VPPASTLGMVTGLLAFIWLPLGMPFGRLAGWCVQPIIWIAHFGAKAPSGLIRWPAGGWAL GVLAGLCMGLALITPTVLAKPWLTALAGLAVIAAMVVRPPLPGWPGQWQVAICDVGQGSA ALVRAGPHEAVVVDTGPDPHRLSRCLDDLDVAQVPMVILSHFHADHVDGLNAVHDHGLTR AIVVSQLSSPPWSAKRVAQTAAQLGARVVVANPGRVMTAGTAKLELWGGTQLSDTGKDES GEEPAVENNSSVVIKATVDELRVVLPGDAEPEEQHHILTGGTDLSSDVLVLPHHGSARQD EGFWAATGASVAVASAGQGNPFGHPSYKALSLAKRMGMQLHRTDLEGTVLLARNGGSVLV QTRS >gi|302034473|gb|GL383162.1| GENE 422 428008 - 428859 298 283 aa, chain - ## HITS:1 COG:BS_comEA KEGG:ns NR:ns ## COG: BS_comEA COG1555 # Protein_GI_number: 16079613 # Func_class: L Replication, recombination and repair # Function: DNA uptake protein and related DNA-binding proteins # Organism: Bacillus subtilis # 126 283 62 204 205 102 41.0 6e-22 MNDDYRDRLEDLIARLPARNLGPRRSATPAEEEPAQEETPTPRRTVSRVHASAVGVLLVV VLSVIAVWLMRSKPTEVPAGAVMVSTVPEGTTMPGRETTESEASSESTTPAALPVATTTP AVGAPIQVHVAGRVKHPGVYTVNPNARVADAIEAAGGMTAGAHPGRLNLAAPVCDGCQVW IPVGGDGAVTPPDQSAGGPAGAVGGSGRSSGVAAASGSDKAPVNLNTANQSELETIDGVG PVMAGKIMAWRQEHGQFASVDQLREISGIGAKTFEKIKPHVTV >gi|302034473|gb|GL383162.1| GENE 423 428983 - 431463 2081 826 aa, chain - ## HITS:1 COG:TM0168 KEGG:ns NR:ns ## COG: TM0168 COG0495 # Protein_GI_number: 15642942 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Leucyl-tRNA synthetase # Organism: Thermotoga maritima # 17 824 10 823 824 806 47.0 0 MSDQVRETTGYDAVAAQEKWSKYWEEHRTFASLDDGSRERRYVLDMFAYPSGDLHMGHAE AFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAAIKHGTHPAEWTYRNIDTQAASFKR YAVSFDWSMRLHTSDEEYYRWTQWLFNRFFEKGLAYRKDSWANWCPNDQTVLANEQVKDG CCERCGAVVTKRQLNQWYFRITDYAQRLLDDMDQIEGKWPERVLSMQRNWIGRSEGAYVD FTIDGRKEPVRVFTTRPDTLYGATFMVVAPDSALAQEIVSDEARPAFETYLDEVKKKSEI ERQATDHEKTGVPLGVEATNPVNGAKVPVWAGDYVLADYGTGAIMAVPAHDQRDLDFART YGIDVIPVIDTGEADPRESGVATTGDGAYQNSGFLDGIATKTEAIATMCEFLGEKGIGEP TITYRLRDWLLSRQRFWGCPIPIIHCESCGDVPVPDDQLPVKLPDLRGAELAPKGTSPLA GEEASEWRSVACPSCGGAAQRDTDTMDTFVDSSWYFMRYCCPHYDKGPFDVEAVRRWMPV AQYIGGVEHATMHLLYSRFFTKVLHDLGMVDFTEPFQRLMNQGQVINEGRAMSKSLGNGV DLGKQIDEFGVDAVRTTVIFAGPPDEDIDWADVSPVSTLKFLQRAWRVASEVTSDPDADL TQGDSTLRRVTHRSIADITELLEGGRYNVVVARIMELVNATRKAIDSGCGPADPAVREAV TFTAQALSLVAPYLAEEMWEMLGLEPSVANSHWPTADEKLLVADKVTMVVQVTGKVRAKL TVSPDITEAEAREVALADVNVQRFTEGKEIVKIIAKLPKMISIVAK >gi|302034473|gb|GL383162.1| GENE 424 431653 - 432441 820 262 aa, chain + ## HITS:1 COG:L104065 KEGG:ns NR:ns ## COG: L104065 COG1814 # Protein_GI_number: 15673456 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Lactococcus lactis # 36 259 3 226 226 152 41.0 6e-37 MSSIPNMSALALAHDASSTESTRSSTPSRQPHEPDKGTGSLNSKLNWLRAAVLGANDGII STAGIVMGVAGATVNRSSLLIAGLAGLTAGALSMAGGEYVSVSSQRDIEKTVMAKETAEL RDFPDEKLEELTGIYTEKGLSRGTARQVALELTAHDPLRAHAEAELGLDPDEYTNPWHAA FASMAAFTVGALVPLLAMVCSPTATRVYITITATIVGLFLTGLGSALASGSGKTRPVARN IIVGMCSMTITYLTGHLVGTRV >gi|302034473|gb|GL383162.1| GENE 425 432451 - 433473 256 340 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3949 NR:ns ## KEGG: HMPREF0675_3949 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 340 21 360 360 656 99.0 0 MTALHSSTADNRDPLTVRTVEEAVTLAPYLLGFQPTESLLMIVADDGAACQGFVARADLD GLESAPAMNAFAARVGPLAGQGRTVVLAFSKDQDRGMVTLASAVEAMKGMNIGDAAWTDG EYWRSIFCDEQGCGENHRFVPDPTIAAEAVYRGLTVLPSRTSLVDKLSGPGRTCDPDTRR LLANSRRRLSRKDDNTVEVRCQALFESGDEINDAVVTELAVAVQRSDVARRLWMSMERAD ASRWLRIWSRAVEIIPDRMAPAPLSLCGLAGWLSGEGAVAAVCARRCEFMVGTADLPAAL TVIVDAFVPPKLWDVMDHDPAVIAHPFLEEQVDEEINLSA >gi|302034473|gb|GL383162.1| GENE 426 433613 - 434167 271 184 aa, chain + ## HITS:1 COG:no KEGG:PPA0889 NR:ns ## KEGG: PPA0889 # Name: not_defined # Def: putative glucoamylase S1/S2 precursor # Organism: P.acnes # Pathway: not_defined # 1 184 1 184 184 290 98.0 3e-77 MNQPPDINQYRPPKRHGGWIAVIIVTALVVALVIVARRVTTEPANPVTPTPSPIATSASS TPTPIPASATAVASSLPFSSKDDDTEGRWSIDHVEWGPNTVTLTMTIAVTKGSLTDYTFF IMENQSTDIHQASQPPTGSLGTGVSQGHKVHGTITIDCPRTDATVMLTHGSGMSSPISAL MIRA >gi|302034473|gb|GL383162.1| GENE 427 434236 - 435942 1468 568 aa, chain - ## HITS:1 COG:BS_malS KEGG:ns NR:ns ## COG: BS_malS COG0281 # Protein_GI_number: 16080040 # Func_class: C Energy production and conversion # Function: Malic enzyme # Organism: Bacillus subtilis # 14 568 10 566 566 628 56.0 1e-179 MSVPFQYAHDDDGGLLRIAARGQEVLTNPLANRGTAFTIEQRKALGLTGLLPSGVMTITD QLKRVYAQYSAQPDDLAKYLYLNHMHDRNEVLYFRLLAEHIEEMLPIVYTPTIGKAIEEY SHWYDRPRGIYLSIDDPEDMEQALAQLGHGPDDVDLIVATDAEGILGIGDQGVGGVAITV GKLAVYTAAAGIHPHRVLPVILDVGTDNMERLNDDGYLGVRHPRVRGERYDEFVQQYVET AHRMFPHALLHWEDFAAGNATRILNKYRDDYCTFNDDIQGTAAVVVAAVLSAVKSSGIPL NDHRIVIHGAGSAGTGIANLLVQLMVSQGADEKTARSHFWGLGSHGLLREGLRLRDFQQP FARSKEELEGWTLDSPDQYTLGDVVRNVHPTILIGCSAQPGAFTEDIVKTMAAQCERPVI MPLSNPTRKAEALPSDVLTWTDGRALVATGSPFKPVMVNGVTYQIAQANNALVFPGIGLG TIAVRASRVTSGMIAVAAEAVAMHIDNRVVGASLLPSIKSLRPLSASVAIAVAQQAMEEG VATEVTDNPVEKVFSAMWQPRYPRIAVV >gi|302034473|gb|GL383162.1| GENE 428 435985 - 436953 908 322 aa, chain - ## HITS:1 COG:CAC0267 KEGG:ns NR:ns ## COG: CAC0267 COG0039 # Protein_GI_number: 15893559 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Clostridium acetobutylicum # 11 321 2 312 313 252 40.0 8e-67 MTVMSTFDATRRASKISVVGAGSVGSSLAYACLIRGSAGLVSLYDIAKDKVEAEVADLAH GTQFTPASVMGGADVHDTADSDVVFITAGARQKPGQTRLDLAGVNANILRSLMPQLVEQS PNALFVLVTNPCDVLTVVAQEATGLPANRVFSTGTMLDTSRLRWLIRQWANVEQRHVHAT IVGEHGDSEFPLWSTANISGVPIRDWAVDGNRVFTEDVLADLAHEAAYAAYKIIEGKGAT NYAIGLTGARLAEALLRPGRSVLPLSSVMTDMHGISGVALSMPCIVSRDGIEGVVPVAMD TEEIASLKASAERLRDTLSSIA >gi|302034473|gb|GL383162.1| GENE 429 437066 - 437716 542 216 aa, chain - ## HITS:1 COG:CAC0495 KEGG:ns NR:ns ## COG: CAC0495 COG0352 # Protein_GI_number: 15893786 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate synthase # Organism: Clostridium acetobutylicum # 7 205 5 199 211 147 40.0 1e-35 MSRPEFDLSVYLVTDTAQCGGPDEVVETVRHAIAGGVTLVQFRDHDLSDDEFVALGRRVR EICVSGGVPLIIDDRVHLVAEIGADGVHVGQSDMPVDQARAILGDDLLIGLSAQTPAHVE AALSQGRDIVDYLGVGALHGTGTKPEAGELGLAEIRDVVNASPWPVCVIGGVSASDAQDV ARVGCDGLSVVSAICRSTDPKSSARELAEAWRTAKE >gi|302034473|gb|GL383162.1| GENE 430 437703 - 438512 495 269 aa, chain - ## HITS:1 COG:ZthiM KEGG:ns NR:ns ## COG: ZthiM COG2145 # Protein_GI_number: 15802579 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxyethylthiazole kinase, sugar kinase family # Organism: Escherichia coli O157:H7 EDL933 # 9 256 12 259 262 168 42.0 1e-41 MTELSNLVAESVERLRRDKPLVQCLTNIVVANFTANVLLSAGAVPAMVDNPEESEGFASI ADGVLVNTGTPYRETAEAMIAAARGAASSNTPWVLDPVGVGMPWRTRVALDTLDVAAPAV IRANASEVLALAGTGASARGPEAGDAVEDALASATQLVRRYGCVVAISGPVDHILDADRH VIVSSGHEWMTRVTGVGCSLGALTAAFAGIQNDHLIAAVSATAMLCVAAERAAERSAGPG AFAQALVDELFLVSPDEVGERGGLRDVTA >gi|302034473|gb|GL383162.1| GENE 431 438334 - 438717 108 127 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MEANPSDSSGLSTMAGTAPADSNTLAVKLATTMFVRHCTSGLSRRNRSTDSATKFDNSVM STTPFAGMIRTGSGGRHLRGALSAHSDQWAPASLPSNLPPCRALTTVLALLIGKCRLKPA PTRQRSG >gi|302034473|gb|GL383162.1| GENE 432 439131 - 440489 1276 452 aa, chain - ## HITS:1 COG:Cgl2919 KEGG:ns NR:ns ## COG: Cgl2919 COG0477 # Protein_GI_number: 19554169 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Corynebacterium glutamicum # 13 402 7 399 439 138 30.0 2e-32 MSTSTTPKQSALDLIDSRPLTRNQKNLVALAVVGNISEFFDIFLIGFVVSVLTKPWNLTG TEAGVILACSGLGTVIGAIMWGRLADKIGRRSSFFWCVLLFVVFTVVSVFTPDRGWIMLA ILRIGVGIGVGGLNITSIPYVQEFVPAKQRGLLAGLASVFIPLGLFLGSLAQNALGDNWR ALIALGAIPVFLLVWIRFVPESPRFLQSHGRDKEAREALAWALDMPADDIGDLPAVEHVQ DASYSLVFGKYRKSLLIVSLGSFCFILGSFTIQSWGQTLLKTGFGKSPEQVGTLFMFVSL ADLIGRFLSAWLADRIGRRATMLSFGLIGAGGTLIIALSARLGWGWQIFFVGVLIAMAFA DGAFGILNAFGAEQFPNEARSTGLGLGYGIGATAKIIGPALMGLMVGGSAVKQNVTLDAV FPAFILFAVLLVIGGMTYMFARETRGTSLDTI >gi|302034473|gb|GL383162.1| GENE 433 440524 - 441474 880 316 aa, chain - ## HITS:1 COG:TM0067 KEGG:ns NR:ns ## COG: TM0067 COG0524 # Protein_GI_number: 15642842 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Thermotoga maritima # 5 306 3 325 339 128 27.0 1e-29 MTYDISTIGEGQIRLTCYKGERLINAQQLRATAACSEANVSGLLSQLGRSTCWASVMPKG DLTDRVVNEFRSVGVDVSHICMKPEGRVALYFMEPGEYPMPARVLYDREHTPFRDVTVED LDWEALLDTRLVFVTGITAALTENTAAVVRHFVDEAHRRGIAVALDVNYRSLLWGPEHAR EVLEPIARMSNIVFCSVRDGKAVFGIESDGEQACRELRELFGVPTVVSTDQINGVYFSDA ERGDCTFPVVQVPVIDRPGAGDSFVAGTLHGYLGGDVVQGIHYGQRTSAYALTHYGDLTR VSPSELNIPPNTDILR >gi|302034473|gb|GL383162.1| GENE 434 441471 - 442139 570 222 aa, chain - ## HITS:1 COG:TM0283 KEGG:ns NR:ns ## COG: TM0283 COG0235 # Protein_GI_number: 15643052 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Thermotoga maritima # 1 212 43 252 254 201 46.0 1e-51 MLEKLKTDVCRGNLELPRHGLVTWTSGNLSARDPETGLVVIKPSGMLYDAMTPDDMVVVD LDGKVVEGHRGASSDTASHLYVYRRRDDIRSIIHTHSTFATAWAATGQDIPCAVTAIADE FGGPVPCGDYAQIGTEQIGEQIMRFIDQSPAVLLKKHGVFTVGTSIEKAIKAAVMVEDVA KTLTYAKLIGEISPLPQSEIDSNHDRYTNRYGTAAASTGVTA >gi|302034473|gb|GL383162.1| GENE 435 442227 - 443114 574 295 aa, chain - ## HITS:1 COG:ECs5173 KEGG:ns NR:ns ## COG: ECs5173 COG3623 # Protein_GI_number: 15834427 # Func_class: G Carbohydrate transport and metabolism # Function: Putative L-xylulose-5-phosphate 3-epimerase # Organism: Escherichia coli O157:H7 # 5 288 2 280 284 211 38.0 9e-55 MTESLTDGVTLGIYEKALVGNPLATDDDWRRFLNQVPEAGFSFVDLSVDESEERMARLGW DQRRRRMVRHCVEATETAIGGVCLSVHRRIGPGSADPAVRQRAREVMGEGLQLCHDLGAP VLQVAGYYCYYEQMNDHAEQWYTDLLLDAVPMAARLGVVMGIENVDGTDVTSIRKAMEFV KLADSPYLQVYPDLGNIAEQQLDVVTELEAGRGHMVAIHVKDVRPGEPRRVPMGEGTVDW DESFAVLAEQGWRGRMMIEMWNDDAPDSNTRSASARQFIEEHLRTAGIPVRRALF >gi|302034473|gb|GL383162.1| GENE 436 443111 - 443764 604 217 aa, chain - ## HITS:1 COG:STM4386 KEGG:ns NR:ns ## COG: STM4386 COG0269 # Protein_GI_number: 16767632 # Func_class: G Carbohydrate transport and metabolism # Function: 3-hexulose-6-phosphate synthase and related proteins # Organism: Salmonella typhimurium LT2 # 1 215 3 215 216 182 45.0 5e-46 MPRLQIALDTYDLPSALAPLATAVDQIDIIECGTILVLAEGMDAVRAIRAAYPDKTILAD VRIAEAGAKIARMCFEAGADLVSCVAGASLTTIDQVCKVAGEFGGEVQVELADEWYDAER ARRWRTLGVQHVIVKRSRDREAAGDLSWKPEDLGRVDELAGMGFTVTVTGGITPEDLPVF AGHPVGIVIAGRSIVAADDPKAAAKRLRSTLDEVWPQ >gi|302034473|gb|GL383162.1| GENE 437 443770 - 444762 1146 330 aa, chain - ## HITS:1 COG:MYPU_5930 KEGG:ns NR:ns ## COG: MYPU_5930 COG1735 # Protein_GI_number: 15829064 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase with the TIM-barrel fold # Organism: Mycoplasma pulmonis # 5 326 6 327 351 218 37.0 2e-56 MAVVRTINGDVSPDTLGVVNAHDHLIRVGAGEVYIDPDHLLDDVDKAAQEATYFVEASKS WAAGGTIIDMCPASSGRGVLKTLQVVEKVPGLQVVQATGFHQQKVYLEWRQSWVNQYTVT QIADLLIADIVEGIDRFDYMGPIVERTNVKAGVIKWATAYGKITEWEKKSGQAVAIASKE TGCPINTHVTAGTCGPEQARFLVDQGVDPAKIAIGHMQRNWDPWVHEQICKLGCYVELDG TNRIKYVPDNTRVNLVKTLGEKGYGKQILLGTDSGKASYQKVYGSVSGIDYDPAVFCPRL VEDEGVDRDYVNDLLINNAATFFGFEPLAG >gi|302034473|gb|GL383162.1| GENE 438 444944 - 445888 416 314 aa, chain + ## HITS:1 COG:VCA0621 KEGG:ns NR:ns ## COG: VCA0621 COG2390 # Protein_GI_number: 15601379 # Func_class: K Transcription # Function: Transcriptional regulator, contains sigma factor-related N-terminal domain # Organism: Vibrio cholerae # 5 310 10 318 331 121 29.0 2e-27 MTDREHIQTLLTVARRYWLEQATQAEIAAEIGYSRSMVSRLLDEARRRGIITFTVQHPLE RAIELEDALTRTFGLTCARVAMSNDNATADEVARMAADLVTTYMHPDSVIALSNGRGVAS VVHAMTPIRRPGATVVQAIGGTAKGNLLLDSPELCRQLAERIGCAYRVMPAPVLVSNPQA AAALKAEESVGMTIAMASHADILVTGVGTVGMHSVAPIFDHVMSERAHTELLSRGAVGHI CGHHVDTRGRHIDADFCQGLMAVPLDRIPSITHVIVSAFGSEKVPALTAILRGKWVTDLV TDIATARAVLGHLD >gi|302034473|gb|GL383162.1| GENE 439 446315 - 446743 235 142 aa, chain + ## HITS:1 COG:no KEGG:PPA2399 NR:ns ## KEGG: PPA2399 # Name: not_defined # Def: transcriptional repressor, MarR family # Organism: P.acnes # Pathway: not_defined # 1 142 1 142 142 221 100.0 1e-56 MDLRSILMHLQCELVAERSLVNPLDISWLQYDVLLQLDREHEMLPSELSLVMGISRTKLS KALKSLKVMGYVRQTPSKSDGRELRTSITESGRRLLEDISLQHTSLYETAIRSMTKDELE VFARLSEKLSSSLKQQRIASHA >gi|302034473|gb|GL383162.1| GENE 440 446736 - 449075 796 779 aa, chain + ## HITS:1 COG:CAC1464 KEGG:ns NR:ns ## COG: CAC1464 COG0178 # Protein_GI_number: 15894743 # Func_class: L Replication, recombination and repair # Function: Excinuclease ATPase subunit # Organism: Clostridium acetobutylicum # 11 769 4 754 755 603 41.0 1e-172 MRNLRKDIVSRSSVGSIQIHGAKTHNLRDVTVCIPKHALVGVAGVSGSGKTSLVSTLAAG AQQAVSSLFPAFVQARLNTLEPGLVDGLQGLTFTAIVGQKKFSGNACSSVSTASGIAPYL RLLFSRSGSPSAGYSPSYSPNDPRGMCMDCSGLGYVDGIDLQELIAPDRSLNEGAVRFPS FEPGTYRWKRLVCSGLFDPDVPWKELPEASRKLLLHGQGVRLERPLTGYPKHGIFDGIIP RLKASYLEKANAKTTEKEDAALRRIVKRVVCPHCHGQRINEAARASRIEGLNIAEASHLS IDECIAFIKTITDEITEAPRQAVLARLNNMRDIGLGYLSLDRPTDTLSGGEAQRLRLVSL LDAPITDATFVMDEPSSGLHPADIERLLRSLRKLRDSGNTVIIVEHNLQVLAACDHVVEL GPGAGDDGGRVLFEGSPRSLTRSDTPTGKALRAGIQLNRRSRPATDVIEVTHARCNNLGD VSVSFPVGALTVVSGVAGSGKSSLASALAQQHPEVTIIDQLPLAASSRSSILTALGLESP IREAFSKISGLTTSWFSANGKGACPLCKGRGTTHVDMAFMDDVQTPCERCGGRKFNETTM AVRLPMGSLNPTIADVLDSGLNQVSELYATQDDVLTVISLLQQVGLGYLTLGRTLNTLSG GELQRIKLVQFLKEHREEQESVLVLDEITTGLHPKDVEQLIQFLRRLSERGATAIAIDHN PGLISQADYNIDIGPGAGTQGGTVVFTGTAWGLANCPASTTGKWLHKLVCSPAGVEPAP >gi|302034473|gb|GL383162.1| GENE 441 449379 - 449546 129 55 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3932 NR:ns ## KEGG: HMPREF0675_3932 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 55 1 55 55 89 100.0 4e-17 MFAVYRASTRAEGKKTMTRLINSIASAAPTSLAAVCKLGRVLTKRGEDILAFLPP >gi|302034473|gb|GL383162.1| GENE 442 449608 - 449847 57 79 aa, chain - ## HITS:1 COG:Cgl2316 KEGG:ns NR:ns ## COG: Cgl2316 COG3464 # Protein_GI_number: 19553566 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Corynebacterium glutamicum # 1 50 234 283 436 58 56.0 2e-09 MDGFAGFKTAAAEEIPKATTVVDRIHVIRLAGDALDLCRCRVQIELYSTRDRRHHLLTRI SEPSPPAQIIYPLTSNSSA >gi|302034473|gb|GL383162.1| GENE 443 449867 - 450106 66 79 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|314987615|gb|EFT31706.1| ## NR: gi|314987615|gb|EFT31706.1| hypothetical protein HMPREF9595_00770 [Propionibacterium acnes HL005PA2] # 29 79 1 51 51 89 98.0 8e-17 MTPIDSGAPARCCGGWRGCGVGCSHEWNVSAIKTGGRWEYTHSRSKRMKGAWAQEAGDGR RAFETGLQDLAAGPIPDLA >gi|302034473|gb|GL383162.1| GENE 444 450106 - 450345 136 79 aa, chain - ## HITS:1 COG:no KEGG:PPA0875 NR:ns ## KEGG: PPA0875 # Name: not_defined # Def: GntR family regulatory protein # Organism: P.acnes # Pathway: not_defined # 1 79 384 462 462 147 93.0 2e-34 MFPAWVWTASQSGTGLWADTHNDSSALAEPAKRVGVRLAPGPGYSAYDGQRTMLRLPVWH EPESLEKALGMLRRAISDR >gi|302034473|gb|GL383162.1| GENE 445 450826 - 450999 118 57 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3929 NR:ns ## KEGG: HMPREF0675_3929 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 57 1 57 57 98 100.0 7e-20 MWLSKLALQISRQTVAEAFGIVEPAGLPILRAAIAEPFARDGVPTVPQRIAVNTGVC >gi|302034473|gb|GL383162.1| GENE 446 450914 - 451258 168 114 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3928 NR:ns ## KEGG: HMPREF0675_3928 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 71 114 1 44 44 85 100.0 5e-16 MGSPAGSTIPKASATVCRDICRANFDNHTWSIALLRNQRYNHIGQFVSSSMVQAESPNYG HDDMITKECFMAAIAVFGTLDTEGDELDWLRHRILTNGSKVESSSMLAHSPTAA >gi|302034473|gb|GL383162.1| GENE 447 451292 - 451597 224 101 aa, chain + ## HITS:1 COG:YPO3839 KEGG:ns NR:ns ## COG: YPO3839 COG5441 # Protein_GI_number: 16123974 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 1 101 126 225 405 77 44.0 4e-15 MSSGDARAYVGQADVTLMYSVVNVADINHVSRMVFANASAAIAAMVKEYEEAGIVSNTAH NKPVAGLTMSGLTTPAADEAARLGYEVLVFHTTDSGEKSME >gi|302034473|gb|GL383162.1| GENE 448 451790 - 452905 733 371 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3926 NR:ns ## KEGG: HMPREF0675_3926 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 34 371 1 338 338 701 99.0 0 MKKEHERSLPLALPDDYLLPYGTELTPSSFTKTMDNTYIVDALDSHGNPAHYEIAVNGNL AKCTIDGEAASYENPYSHRDTGAEAPILDWFDWIASQDAAGHRYLDSDIYGGQTVAAKLF CAEHNLVTYSSTKCCVSNFSTLSEFQEWLDSSVLQETPMRAEVVGLLTDPEQARKPFSYA FDLLDAIEGPDAVSELKLATAGEKDCGLRLTSANFGGNEILLEDGRTMGRTVSMVKACYD DGTQPTWMHAIGFVPKTYLPEMNVRVVHENDAAWWGILVDQLDVCLVLPRPSAERQLDTN VKVHMDRDGTEAFIRFSPTDECELVNRLDDRFKRKWGRWLDSSIVLDNREIQDAVTHMES ILDKEYGGRTA >gi|302034473|gb|GL383162.1| GENE 449 452902 - 453264 187 120 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3925 NR:ns ## KEGG: HMPREF0675_3925 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 81 120 1 40 40 78 97.0 8e-14 MTEKQVRTVLPTKDEPRAHRGRSTEFDDGGPDDFDIPGEGGAACAWTESLCVDSVTRFIV RVPVQEGIDPEIERYCDRHWVLKLAEIIETDMPICKHSLRDHVISTGELVGDTWEVRTEG >gi|302034473|gb|GL383162.1| GENE 450 453316 - 453492 97 58 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3924 NR:ns ## KEGG: HMPREF0675_3924 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 58 3 60 60 110 98.0 2e-23 MLGPGLGSRISAWTLVGATIEIALIWHDSPVFPWSSALRVPMEKTLCELAENYRIGNT >gi|302034473|gb|GL383162.1| GENE 451 453558 - 454241 578 227 aa, chain - ## HITS:1 COG:SP2000 KEGG:ns NR:ns ## COG: SP2000 COG2197 # Protein_GI_number: 15901823 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Streptococcus pneumoniae TIGR4 # 1 193 1 181 199 82 30.0 7e-16 MKVLLAEDSALLRAGLCQLLRAMGHHVVEVGDADTLLQAGRFSDIEAIVTDVRMPPRMAD DGLAVVHELRRERLAEGRPVLPVIVLSQYVAAAYLDRLLDYGAFGYLLKERVSDVAEFSR ALVDVVAGGTVVDPEVTRALVGAASDGLAMLTDRERDVLELMAQGLSNSQIGERLFLSRS GVSKHVANVFIKLGFDPTDDNRRVRAVLVWLRREGIHRAPSKLLEPR >gi|302034473|gb|GL383162.1| GENE 452 454256 - 455455 601 399 aa, chain - ## HITS:1 COG:BMEI1583 KEGG:ns NR:ns ## COG: BMEI1583 COG4564 # Protein_GI_number: 17987866 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Brucella melitensis # 147 395 189 427 439 81 26.0 3e-15 MHSVEPSSVTRRVWPNGWSWNPIRFVFSTANLKSLAHAFVLAVLCGPMALLSLLGLVLIG GVGSASDDMWRGMAFWRGCRVPRPRTPGVDWRTWLCALVQMLLGAAAFGVLSMGSVLAGA FAWAAITTQHGWDLFGWYPGDGLARPVMASLSLITLMLEIVSCWVLSGLSVAVWALLTMT RTTVDDLQRSRKVLTDSFSSERRRIERELHDGVQQYLTATQLALATAQLASTDNPEALAA IAIAQENTGRAVAALRTTIRGIHPRVLDEAGLTEAVRELVGLSGLRGSVQVQENGHDQQV SSSGAVLLYHAVAEAMTNAVRHGGASAVAVTVTWHAESVEVTVVDDGTGPQDGAVSPDSS GLAGLTQQAEMLGGSLWFGQDKATGGGRLRVQIPRKTAV >gi|302034473|gb|GL383162.1| GENE 453 455569 - 456321 286 250 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 13 232 2 225 245 114 32 7e-24 MTRLREEPPVPTLEVKELHHRFEKGPEVLRGVSVTFQSGTMTAIMGPSGSGKSTLLNCIS GLVRPKTGKVLYNGADLTGFSQSDLDKLHRRSWGFIFQSYNLVDALTSADNVKLPALFDR KRMDNATVEAALGRVGMAGFAHRYPDQLSGGQRQRVAIARAIASTREVVFADEPTGALDS ESRREVMTHLEALSQAGSTVIIVTHDPVVAASASRVLFLFDGQIADDSTGMDAVAISSRI AALEAQACGS >gi|302034473|gb|GL383162.1| GENE 454 456612 - 458174 979 520 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3920 NR:ns ## KEGG: HMPREF0675_3920 # Name: not_defined # Def: efflux ABC transporter, permease protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 520 102 621 621 903 99.0 0 MMRLTGASRGLLARMIASESFILGLLAGLPGALIGAALTYPLFRGMQAVGFFGRTMTIDF RFPVGSMFAVTGLIATVAATAGCVATRISIRGDLLASIAPMARRMSWWQIAWRFVLILTG VVSLVVLDPQGMGTNIILILPILAVVPLLAAAPLAMPIGAWVVGRIVGLFAPGPGKLAAR RAAKDRMRYARLVTPAIISCGILGGFLVANAPDEQMRTQALTAQVAADTVITTNLDDATP IAKALGHKTRQQSRLASRYRVAGGTRRMWHFTDAPAFAKLTNLHITAGDMSRVTGTNIAS GIGNSVGDRIAVVDNTGHPVTLTVVAVFTDEVYEGLIFYWGQISALGPKNTTATIFTKGL STGEVRSVLQSEGISGTVFDKTGFVQYMSDLRRANTYRSNVGLFATVYLMCLIGVIQTTI SNGLSRRKEFQVLRSLGVSRLGILATVGVEAAILQVVTGILVFSVILALGFRFASNNGTS AWAAVSAALPTTAGAFCLIAVLTVVAQLIGSQVSLRYSSN >gi|302034473|gb|GL383162.1| GENE 455 458159 - 458497 157 112 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313764634|gb|EFS35998.1| ## NR: gi|313764634|gb|EFS35998.1| hypothetical protein HMPREF9567_01485 [Propionibacterium acnes HL013PA1] hypothetical protein HMPREF9612_02032 [Propionibacterium acnes HL063PA2] hypothetical protein HMPREF9573_02404 [Propionibacterium acnes HL072PA2] hypothetical protein HMPREF9595_00782 [Propionibacterium acnes HL005PA2] hypothetical protein HMPREF9579_02049 [Propionibacterium acnes HL087PA1] # 1 112 65 176 176 178 100.0 1e-43 MSGTPLATSAHTVRAAEPESSHSLRRSTDRWRSAADKRKQLAAVAETSKNSRYRKLSGRE VSRRNRRGLVVDKPSLIYPDMGIMRSETKLQRTASSNVDPTHALLGPVQLLL >gi|302034473|gb|GL383162.1| GENE 456 458560 - 458961 80 133 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAQTFLTAAEIVELVAAYEAGETLRRLGKQFHIHRLTATAHLARRGVPVRQRSLGSVQNK GGRPGLPSRLHARATGPPVRGGRADHASNHHTTAGVDPTRWTTSSAVARAIPTTAPSSHS WSRNVNAACQTWT >gi|302034473|gb|GL383162.1| GENE 457 458859 - 459059 95 66 aa, chain + ## HITS:1 COG:MT0947 KEGG:ns NR:ns ## COG: MT0947 COG3328 # Protein_GI_number: 15840343 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Mycobacterium tuberculosis CDC1551 # 6 66 84 169 439 82 52.0 2e-16 MDDLVGRGSGNSHNSTFEPQLVKKRQRRLSDMDLILSLFVKGLTTGEIAAHFAEVHGTSV SKDTIS >gi|302034473|gb|GL383162.1| GENE 458 459160 - 459342 148 60 aa, chain + ## HITS:1 COG:MT0947 KEGG:ns NR:ns ## COG: MT0947 COG3328 # Protein_GI_number: 15840343 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Mycobacterium tuberculosis CDC1551 # 4 58 334 388 439 74 65.0 5e-14 MTDRSYPAMIRLRRNAWTEFVPFLDYDVEIRKILCSTNAIKSLNTRFRTVMRAQGHFPTR >gi|302034473|gb|GL383162.1| GENE 459 459468 - 459974 322 168 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3917 NR:ns ## KEGG: HMPREF0675_3917 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 10 168 1 159 159 298 98.0 7e-80 MFARDGFDSVTVEQITEAADVSAMTFYRHFGSKEAVVTSVATTDQMNHAIGALDRIRIPG EIPDVLDDFFADAASWEAELAERVALVRANQTLVNALWQRSTSWTDAISEVLGPGLDSRI YARVLVGTITETVLAWPDSPEFPSSFALRELIEKTLSSFVNYHQHRGI >gi|302034473|gb|GL383162.1| GENE 460 459977 - 460195 102 72 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3916 NR:ns ## KEGG: HMPREF0675_3916 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 35 72 1 38 38 64 100.0 1e-09 MSLLVLGENQNRVRERPSSILTRYQLLDCTNLPVMQLIKLHFPSRPGILYAPRLFVAIAR NSPLVALLEKQP >gi|302034473|gb|GL383162.1| GENE 461 460199 - 460486 105 95 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3915 NR:ns ## KEGG: HMPREF0675_3915 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 29 95 1 67 67 80 98.0 2e-14 MVALLDGDVGVAVVAAGGVAGGVDVADALSGGDDAVVGGKDGGAVGASSSALGWSLVTPV MGWTRIPNAEVATRVPWGSGNTTRPDAGTGGGTKS >gi|302034473|gb|GL383162.1| GENE 462 460673 - 461230 218 185 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3914 NR:ns ## KEGG: HMPREF0675_3914 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 185 1 185 185 371 99.0 1e-101 MQTDPFAILPLDKWKWHPSPLAGQIVYVLTSSASGELDLAPKSWVQMAGFNGPLLSLGCS KHHWTHNDIMTTGHYTVSFPTVEQTRCAGAIARTPRAERVAASGLTPVPSSTAGIPHLRE CPAYCECELYREVALEGDEVLILGQIRCLAVHTDVIGLGPGEMYSRLAPGFFLEPGVTGT LALED >gi|302034473|gb|GL383162.1| GENE 463 461276 - 461500 123 74 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313764641|gb|EFS36005.1| ## NR: gi|313764641|gb|EFS36005.1| hypothetical protein HMPREF9567_01492 [Propionibacterium acnes HL013PA1] hypothetical protein HMPREF9604_01760 [Propionibacterium acnes HL036PA1] hypothetical protein HMPREF9606_01735 [Propionibacterium acnes HL036PA3] hypothetical protein HMPREF9618_02320 [Propionibacterium acnes HL082PA1] hypothetical protein HMPREF9592_02444 [Propionibacterium acnes HL046PA1] hypothetical protein HMPREF9588_01841 [Propionibacterium acnes HL025PA2] # 1 74 1 74 74 120 100.0 4e-26 MPRTTSGGQGAPTWQTFLMPCQSGASDGRTSAHEELVVIDLVTAVVPNLPPDRIRTLPLD TVITLLHTTPTSAH >gi|302034473|gb|GL383162.1| GENE 464 461705 - 462238 232 177 aa, chain + ## HITS:1 COG:CAC3339 KEGG:ns NR:ns ## COG: CAC3339 COG0488 # Protein_GI_number: 15896582 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Clostridium acetobutylicum # 1 115 1 130 518 61 32.0 7e-10 MGHLDVATVSYTLPDGRPLLRNVAFSLGTGEQVAVVGANGAGKSTLLRIVMGQLSPDSGI VTCDGNFGVMGQFITGRTVKELLLSVSPPEICVAAAQLARSEAMMNKKGTTQSQLVYASA ISEWGEVGGYDVEVLWDVCTVAALGVPFERCRHRSLSTLSSGEQKRARAGGAAAWPR >gi|302034473|gb|GL383162.1| GENE 465 462189 - 462566 113 125 aa, chain + ## HITS:1 COG:STM0838 KEGG:ns NR:ns ## COG: STM0838 COG0488 # Protein_GI_number: 16764200 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Salmonella typhimurium LT2 # 6 97 165 251 530 64 40.0 4e-11 MSKSGLALEALLRGPDDLLLLDEPDNSLDVPGKRWLEEQLRATDKGVLYVSHDRELLAQT ATSIITLELGVAGNTAWTHPGGFDTYHRAREQRFERLDELRRRWGNLASSAFRCGCTVGG PGSAL >gi|302034473|gb|GL383162.1| GENE 466 462874 - 463194 96 106 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3910 NR:ns ## KEGG: HMPREF0675_3910 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 106 1 106 106 190 100.0 2e-47 MAAAEAAGDYCDARCVQVRIPISPGVHIEGVLRLPASDPVASLVVHGATATSSHFYRGFA QDFGAVTADPTRRVRLPRPQQRAGVFPTAAQLKRLTENSRKPTGRW >gi|302034473|gb|GL383162.1| GENE 467 463272 - 463400 64 42 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3909 NR:ns ## KEGG: HMPREF0675_3909 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 42 1 42 42 67 100.0 2e-10 MEELYRIAPPEGVSTSLGARYTAEATTGLLHAWVTGGVDAET >gi|302034473|gb|GL383162.1| GENE 468 463437 - 463673 183 78 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3908 NR:ns ## KEGG: HMPREF0675_3908 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 78 1 78 78 124 100.0 1e-27 MQSAGINRGALYTHYSSLGELAFALLADGYREIADVHLAARAGRAVDPATVVAEPQRRIV DLYVAHRALFAAAESLSP >gi|302034473|gb|GL383162.1| GENE 469 463788 - 464135 265 115 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3907 NR:ns ## KEGG: HMPREF0675_3907 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 115 1 115 115 159 100.0 4e-38 MGYTFTIPLLIVNFIVYVPGALAFVLASRRPVAGAVATTVAGPLIAIAFLKLHLLGAWVP VWGPWNEPFTVLGVDTLSWAILWITAVVGIVVGLVGAYLLGRSGAERAGAGTASS >gi|302034473|gb|GL383162.1| GENE 470 464105 - 464317 186 70 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3906 NR:ns ## KEGG: HMPREF0675_3906 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 70 33 102 102 115 100.0 8e-25 MHGQIPGAVMHVVLAILFAVIIGPAILRFGTDAALWLMAANLALLIIIAVHDFDHMRQAM AWGTRSRSPC >gi|302034473|gb|GL383162.1| GENE 471 464401 - 464661 109 86 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313764650|gb|EFS36014.1| ## NR: gi|313764650|gb|EFS36014.1| conserved domain protein [Propionibacterium acnes HL013PA1] conserved domain protein [Propionibacterium acnes HL046PA2] conserved domain protein [Propionibacterium acnes HL036PA1] conserved domain protein [Propionibacterium acnes HL050PA1] conserved domain protein [Propionibacterium acnes HL072PA2] conserved domain protein [Propionibacterium acnes HL053PA2] conserved domain protein [Propionibacterium acnes HL046PA1] conserved domain protein [Propionibacterium acnes HL030PA1] hypothetical protein HMPREF9337_01332 [Propionibacterium acnes HL096PA3] conserved domain protein [Propionibacterium acnes HL043PA1] conserved domain protein [Propionibacterium acnes HL092PA1] conserved domain protein [Propionibacterium acnes HL083PA2] conserved domain protein [Propionibacterium acnes HL025PA2] hypothetical protein HMPREF9343_01780 [Propionibacterium acnes HL099PA1] # 1 86 1 86 86 158 100.0 1e-37 MADAAPRGALADRSSWTCLPGRLKPTAHENEVRTPDKGSVCGPSHMTGDRSDQPPTDRHM LIWRLKLRLSSVMAELVAGGGRSWEV >gi|302034473|gb|GL383162.1| GENE 472 465487 - 466164 77 225 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3905 NR:ns ## KEGG: HMPREF0675_3905 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 176 226 401 494 302 99.0 8e-81 MQFIQAAHHSADPNLPPTRVVIHATCPDVGFPSASRAGRAVGTAGYLASISASGSARYVC DATETVQYLGEDVIGWLAPPNGHSIGIEICADGGSRASFNNPSHAYSPKQWLSPQVWLAV EKAAHLTRQICHRYAIPMRRLTVAGTPRRGCVRCRRRRSVSRVAGNRRCRWMFLTAPPPP AGGGGRECRFDCGAPHGRLSVAPFLAGCREGALSSCPGTCRARLG >gi|302034473|gb|GL383162.1| GENE 473 466486 - 467073 348 195 aa, chain - ## HITS:1 COG:alr1107 KEGG:ns NR:ns ## COG: alr1107 COG0406 # Protein_GI_number: 17228602 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Nostoc sp. PCC 7120 # 7 158 33 185 212 73 30.0 2e-13 MPLDEVGRRQAFTVAQVIAAMEPDAIIASPLQRARDTAQAIGACAGLGVQLDDRLIEIDV GRWSGQRAADLRRNDPEYAAGVVSPIDYRRADGETASEVADRIVAVCQDVVAQYAGGTII LVAHGFALRTGICWLLGGDYGASRCLGGLDNCSWSIVDHLPEDVVEARGFLSPWRLMAYN CGVPVPVDVDFAKGA >gi|302034473|gb|GL383162.1| GENE 474 467154 - 467558 205 134 aa, chain - ## HITS:1 COG:ML1453 KEGG:ns NR:ns ## COG: ML1453 COG0799 # Protein_GI_number: 15827762 # Func_class: S Function unknown # Function: Uncharacterized homolog of plant Iojap protein # Organism: Mycobacterium leprae # 1 111 1 112 129 112 57.0 2e-25 MSATEYAIELARVVAYAALDKKGFDIVALDVSEHLAITDIFVVISAANERQVSAVVDAVD KAMHEHKAHRARREGERENRWVLLDYIDIVVHVQHQEERELYSLERLWKDCPSVDLRLPE DEMSVPTDVGTDAQ >gi|302034473|gb|GL383162.1| GENE 475 467555 - 468223 416 222 aa, chain - ## HITS:1 COG:Cgl2301 KEGG:ns NR:ns ## COG: Cgl2301 COG1057 # Protein_GI_number: 19553551 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid mononucleotide adenylyltransferase # Organism: Corynebacterium glutamicum # 15 216 7 208 218 276 66.0 3e-74 MPSVELGLARVHNGRRYRLGVMGGTFDPIHHGHLVAASEVAARFDLDEVVFVPTGVPWQK KGRRVSQAEDRYLMTVIATASNPSFSVSRVDIDRPGDTYTVDTLKDLRRERGSDVDLFFI TGADALSQILTWRGADELFDLAHFIGVSRPGVPLGTKDISHLPAEKVTLLEVPAMAISST DCRQRVSEDMPIWYLVPDGIVQYINKRGLYRDNNDKTTPEDH >gi|302034473|gb|GL383162.1| GENE 476 468223 - 468345 84 40 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSIVPLLMESSALVVGILTLLVLLIALAIVRGIGKGRPHS >gi|302034473|gb|GL383162.1| GENE 477 468393 - 469634 941 413 aa, chain - ## HITS:1 COG:CAC3254 KEGG:ns NR:ns ## COG: CAC3254 COG0014 # Protein_GI_number: 15896499 # Func_class: E Amino acid transport and metabolism # Function: Gamma-glutamyl phosphate reductase # Organism: Clostridium acetobutylicum # 5 412 7 417 418 357 46.0 2e-98 MSSRVIEQAIAARSAATVLRRLRRIDKDDLLAAMGIGLRKGVDEILAANGADVDRGRDAG MDEALLDRLTLTPERIEGMAVGLEGVAHLDDSVGEVVRGWHTPLGVKVEQVRVPIGVIGI IYEARPNVTSDAAGICLKSGNACLLRGSSSALESNRAVIAAMRSRLPEEIREAVQLVEGG HEVTDELMTARGYVDLLIPRGGAGLINAVVTGAKVPVIQTGTGNCHLVIDVSADVEMAVN IAVNAKTQRPSVCNAIETVLVHRGIADSAVRPLVDAMSERGVTVHGDEESIRLDPRIVPA APDEYDNEYLSLDLALRIVDDLEEAVDHIAKHGSGHSETIVTKSMSSQEFFASSVDAAAV LVNCSSRFVDGGEFGFGAEIGISTQKLHARGPMGLREMTTTTYVLRGDGQTRP >gi|302034473|gb|GL383162.1| GENE 478 469689 - 470864 437 391 aa, chain - ## HITS:1 COG:slr2035 KEGG:ns NR:ns ## COG: slr2035 COG0263 # Protein_GI_number: 16329688 # Func_class: E Amino acid transport and metabolism # Function: Glutamate 5-kinase # Organism: Synechocystis # 13 369 9 372 375 257 44.0 3e-68 MTDQRGAICGAATLVVKVGSSSLTLPGGGIDVRRVDDLVDALSEVIAVGRRVVLVSSGAI ATGFPAMGITHRPRTLAGKQAAASVGQGILLAHYASRFASHGLRVGQVLLTVNDLVRPTS YRNAWSTLDTLLGLGVVPIVNENDTVATGEIRFGDNDRLAALVAELVRAQALILLSDVDA LYTAHPDSPDARRVEVVEDIDTLDVDTHKAGSGVGTGGMTTKLEAARMATCAGVPVVLAA AVDAPDVLAGAPVGTYFRPLATRRPRRLLWLADAATPQGQIVIDDGAVEALTQRHSSLLA VGVTRVHGDFQAGDPVTILASDGRVVGRGIAQFSHDEVRVMRGRSSAWLAAEMGPAASRE IIHRDAMVLSRRRKAEPSSRNQKSSGSRVTS >gi|302034473|gb|GL383162.1| GENE 479 470857 - 472374 1178 505 aa, chain - ## HITS:1 COG:MT2516 KEGG:ns NR:ns ## COG: MT2516 COG0536 # Protein_GI_number: 15841962 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Mycobacterium tuberculosis CDC1551 # 2 474 5 479 484 448 57.0 1e-126 MAIPSFVDRATLTAVAGKGGHGCASVKREKFKPLGGPDGGNGGHGGSVILRVDPQVTTLV DYHWQSTRKATNGESGRGDNQAGANGSDMILAVPEGTVVSDADTGELLGDLVGVGAELVV AAGGRGGLGNAALANSARKAPGFALLGEAGEERKILLELKVVADIGLVGFPSAGKSSLIA AISRAKPKIADYPFTTLVPNLGVVVAGETTYTVADVPGLIPGASVGKGLGFDFLRHIERC RAIVHVIDCATYEPGRDPVSDLDVIEGELIAHGGLEDRPRLVVLNKVDVPDAADLADIIF DDVAERGWPVFRVSTKSGEGLNSLKFAMAELVEKARDNEPEPEPERIVIRPEPKNERQAF SIKRQGDGEGGFLWRVTGDKPTRWVAQTDFNNPEAVGYLSDRLNRLGVEEELLAVGAIAG DAVAVGGEDAVIFDFAPQIESGAELLSRRGEDQRLKSERPSATRRREMDREYHRAREEYG QVGRDLRGESWRARVAEEEWFEGRD >gi|302034473|gb|GL383162.1| GENE 480 472477 - 474240 1547 587 aa, chain - ## HITS:1 COG:Cgl0376 KEGG:ns NR:ns ## COG: Cgl0376 COG0477 # Protein_GI_number: 19551626 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Corynebacterium glutamicum # 35 510 65 541 549 388 45.0 1e-107 MTATAAAAVKFRPDRRFWVVYFCLMMVMFLSSLDQTIVATALPTIVGDLSGVEHMAWVIT AYTLAITVGMPLYGRLSDLIGRKTLYLIAIGLFLLGSALCGTAGAMITFIFYRFIQGLGG GGLMILSQAITGDLIPPRVRAAYMAPMGAMFGVSSVLGPLLGGWLTDSISWRWVFWINLP LGVVAWIACLFALKLPKHELAAKIDWLGLTLMDAGAVAIVLLATWGGSQYDWLSWQIIGL GVITVVAWGLLPFVERRIEDPVLPLELFRNRTFVVSTIIGMLAMGAMFGVLAYLPTYMQM TYGYSATVSGLLLIPMTIGILLASTVTGLLTSRIGRYRIFIIIGPIVAAGGMVLMSTLNE NSPVWRIMGDTFVLGLGMGMFFQLLVMAVQNDVRPTLLGTATSHNNFFRQIGVCLGASLI GVAFTTRLTNRVTDLFTSLAASKNPAVLKALGAMSSHHAAASLTPGAVNQMPDFIRNGII EAYVNSLTPLFLWMAPMVAAAGLLAFLLKDVPLSHHTGLQMRAASEAEMEGAQEVPAVEG RENLSENGHGDFSDDLAGSSARRATDVTKVKPTPPRHSAGSNQPGQA >gi|302034473|gb|GL383162.1| GENE 481 474335 - 474943 311 202 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3895 NR:ns ## KEGG: HMPREF0675_3895 # Name: not_defined # Def: transcriptional regulator, TetR family # Organism: P.acnes_SK137 # Pathway: not_defined # 1 202 1 202 202 350 100.0 2e-95 MASPTAIRTQGVIRRAAIELAIEKPVDDVTVDDIAERAGVSRRTVFNHFPSKYDVYLPPL VTYPQEVLDAFATDVETPLATLIRDLLEARWRATNVDFDDLCILMKIGRESSELRMAFKE AVEGQRAALVAASARRTGKSEDSLEVLALVGTVQAMERCAVQSVVARPGGSSAEVADTFD RVVDVWARLSAELSADMSSTKP >gi|302034473|gb|GL383162.1| GENE 482 475044 - 475352 77 102 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3894 NR:ns ## KEGG: HMPREF0675_3894 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 102 125 226 226 142 100.0 4e-33 MIGAAVTSLVIALGGALFTRWFSRTDRSVSGAHQRRGMWARMVAVALVVSVLTVVVGVVW LAPSAGREAGWWVHRATGSLEQWRESAQRAWPYLRKAWNAFR >gi|302034473|gb|GL383162.1| GENE 483 475894 - 476163 462 89 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|50842315|ref|YP_055542.1| 50S ribosomal protein L27 [Propionibacterium acnes KPA171202] # 1 89 1 89 89 182 100 3e-44 MAHKKGASSSRNGRDSNAQRLGVKRFGGQLVNAGEIIVRQRGTHFHPGDGVGRGGDDTLF ALRDGNVEFGTRRGRRVVNVTPVEAPVEA >gi|302034473|gb|GL383162.1| GENE 484 476175 - 476513 506 112 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|213959551|ref|ZP_03387834.1| ribosomal protein L21 [Propionibacterium acnes SK137] # 11 112 1 102 102 199 99 2e-49 MYDKNESRSGVYAIVRSGGRQHKVAVGDVVEIDKVADEAGSSIELTPLLVVDGESVTSDK DALGKVKVTAEVLGETKGPKIRILKYKNKTGYKKRQGHRQKYTQVKVTGIEG >gi|302034473|gb|GL383162.1| GENE 485 476644 - 479268 2264 874 aa, chain - ## HITS:1 COG:ML1468 KEGG:ns NR:ns ## COG: ML1468 COG1530 # Protein_GI_number: 15827770 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonucleases G and E # Organism: Mycobacterium leprae # 309 858 173 764 924 515 56.0 1e-145 MLDETDNTTLNSGGNSTSGIPAPRRRRAASRPAGAPAPVETMGTPVAIAAAGSGGSIVTS DVEVSDLPRPPMGRRRKATSTPRDVKTDVPKVVALEPTPEEPESADTRTEEKPRRTRRGA SETAPSTEAERGTSQRRRATRRRSSRTAEKVEETTEATTATNKGDGADDDPINVALTEAK ARARNHKVEGALANPFGFKEGEERSASDILDSLAVEIGGGEAAMPKRRRRRATRPSEAGS HSAETSGSTDKVAPVEEDKGEVKDRHSSDKKSEKSDYDTTDAVEETAADTEEDGQNRRRR RRGGRRRRRSEDTEDSASEDESSDSDDSQTSSDNDSESSSSDATHRRRRRRRRRGEDISG SDDDPSDVVIKVREPRSRQSVADEVTGIEGSTRVEAKKQRRREGRAAGRRRSAVITDAEF LARRESVDRKMIVRQSDDYSQLAVLEDGVLVEHYVDRASATSSIGNIYLGKVQNVLPSME AAFIDIGRGRNAVLYAGEVDWAKYGKEGEDKRIEHVLKSGDQVLVQVTKDPVGAKGARLT SHISVPGRFVVYSPGGHLSGISRKLADSERKRLKKIVENNIPSDASVIVRTAAEGATEED LVRDINRLKVQWEVIERKVSNSKAPLMLYTEPDLTVRIIRDLFTADFSELVIAGNGGPDD AYDTIKAYVDHVAPEMTSRLIHWEHTDKDPFAEYRIDEQVAKALERKVYLPSGGSLVIDR TEAMTVIDVNTGKFTGSAGNLEATVTANNLEAAEEIVRQLRLRDIGGIIVIDFIDMVLPT NRELLVRRLTECLGRDRTRHQVAEVTSLGLVQMTRKKIGTGLAEAFTEQCEACGGRGYRR FDKPVDSQAPADGGERSKGRGRGHKGSSGKSHSK >gi|302034473|gb|GL383162.1| GENE 486 479541 - 480275 587 244 aa, chain - ## HITS:1 COG:sll1084_2 KEGG:ns NR:ns ## COG: sll1084_2 COG5011 # Protein_GI_number: 16329879 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Synechocystis # 18 176 1 166 222 81 30.0 1e-15 MSKRAQQQPEQQAPPQQRLRIRYAKRGTARFTSHRDFARAFERALNRAHIPMAYSSGFSP HPRISYANAAATGAASEAEYLEVALAEVCDPQKVLTVLGREMPPGMEVLEVAETDRTPFA ELLTASAWLIEPTGDVPGLAEAVEAVMTAETVDVQRMTKSGVRTFDVRAALIGLDVANGC VRLMLRHVTPLVRPDDVLRALAKRCPAVDAARVTRLAQGACNEDASGVSTALADPFTGAA VTVW >gi|302034473|gb|GL383162.1| GENE 487 480278 - 482230 1182 650 aa, chain - ## HITS:1 COG:CAC1254 KEGG:ns NR:ns ## COG: CAC1254 COG1032 # Protein_GI_number: 15894536 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Clostridium acetobutylicum # 10 617 5 603 622 516 42.0 1e-146 MNTQDLLGRIEPLLSRVNKPIQYVGGEHNSIVKEWQDVDVRWVLMYPDAYEVGQPNQGVA ILYEVLNERDWILAERTYSVWPDMEKQMRAAGIPQFTLDGHRPVRDFDIMSVSLSTELGY TNMLNAIDLAGIPVRQADRTDTDPIVLIGGHAAFNPEPVADFIDAAVLGDGEEACLEISE IIRDWKKEGCPGGREGLLVRLAATGRIYVPCFYDVEYLDDGTIGKVAPNRLEAPYTVSKH TVMDLDEWQYPKRPIVPVAETVHERYSVEIFRGCTRGCRFCQAGMITRPVRERSIDAIAQ MVDGGLQATGLEEVGLLSLSSADHSEISDITKGLADRYEGTNVSLSLPSTRVDTFNIDLA NELSRNGRRSGLTFAPEGGSERMRRVINKKVTEEDLIRTVATAFGNGWRQIKLYFMCGLP TETDEDVLGIHDMASHVVAAGRAAAGRKDIRCTISIGGFVPKPHTPFQWAAQASADEVDH RLSVLRDSIRADRQFGRSIGMRYHDGRPGIIEGLLSRGDRRVGNVIEAVWRDGGVFDGWN EYFSYDRWVACCERELEPLGVSLDWFTTRERDYEEVLPWDHLDSGLDRDWLWDDWQDALD GEAVNDCRWNPCYDCGVCPQMGTEIQVGPSGHPLIPLTPVVPDLAPSKEA >gi|302034473|gb|GL383162.1| GENE 488 482276 - 482692 364 138 aa, chain - ## HITS:1 COG:MT2521 KEGG:ns NR:ns ## COG: MT2521 COG0105 # Protein_GI_number: 15841969 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside diphosphate kinase # Organism: Mycobacterium tuberculosis CDC1551 # 5 135 3 134 136 158 58.0 3e-39 MNDEERTLVLLKPDAVKRRLMGEIIGRYEAKGLTVRAMELSTIDAKTARKHYAEHVGRDY YAALEEFITSGPLVAMVLEGRRVISVVRAMNGATDCAEALPGTIRGDFGTEKNHNLVHAS DCLESAEREIGLWFPHLV >gi|302034473|gb|GL383162.1| GENE 489 482726 - 483046 358 106 aa, chain - ## HITS:1 COG:no KEGG:PPA0822 NR:ns ## KEGG: PPA0822 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 105 23 127 128 137 98.0 2e-31 MTKVVVGFLAFEVIVFGLAIPGMILVSGVSVVMSIILGCVGMVVSIVCAIGVPRTWGYLL SWTLQIFGILLGLATPMMYVVGIIFAAIWVSIMVLGKRIDGSPEVR >gi|302034473|gb|GL383162.1| GENE 490 483109 - 484554 1062 481 aa, chain - ## HITS:1 COG:ML1471 KEGG:ns NR:ns ## COG: ML1471 COG0285 # Protein_GI_number: 15827773 # Func_class: H Coenzyme transport and metabolism # Function: Folylpolyglutamate synthase # Organism: Mycobacterium leprae # 11 437 35 483 485 306 44.0 8e-83 MSSHNQLVAELTARWPEHRIGPGLDRERAVLDLLGNPQQACPVIQIAGTNGKGSTAIMVD SLLRSAGLRVGRYCSPHLVDVTERICIDGRPVSHDLFDETWRQVEPMVGLVDAQHIDGIE MTFFEVMTAMAFAAFADAPVDVAVVEVGLGGRWDATNVADVNIAVVTPVAMDHMHILGDS LDKIAAEKAGIIKPGCTPVIAGQEAEAAPVLLAQCADAGVKPLLEGPDWGLLDRRSAIGG QVLRIQTASGPLGELFLPVFGEHMAHNAAQAVAAVEALTGPLKPAIIEQGLAAVQAPARL EVVRRSPLVILDTFHNPHGAASAIAGVRESFEVEPLIAVVAAMADKDVDGVLAVLSDTVS YLVVTSMPDLPRALSVDELADKASAHWDYDHLTRVTDVPEALEEAFRIADSCGPGAGVLI AGSVVLAGRARAILRPDGTMLDAPQTAIVETPDLSEDQVKAMEGHQLEPLPDDDMSDDGG W >gi|302034473|gb|GL383162.1| GENE 491 484551 - 484907 369 118 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3885 NR:ns ## KEGG: HMPREF0675_3885 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 118 1 118 118 184 100.0 7e-46 MSGGSAIRGSRVGAGPMGEAERGEAAPREYVSYFCANHHVIRPAFAAEAEIPDTWECPRC GLPANRDQANPPAPPKIVPYKTHLAYVKERRSEAEAAAILAEALENLRQRRRDGEVIY >gi|302034473|gb|GL383162.1| GENE 492 485025 - 485324 285 99 aa, chain - ## HITS:1 COG:Rv1440 KEGG:ns NR:ns ## COG: Rv1440 COG1314 # Protein_GI_number: 15608578 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecG # Organism: Mycobacterium tuberculosis H37Rv # 20 98 36 116 117 59 50.0 1e-09 MWGSGGTWVTLYDVISAPLTTWPVLTMSIILCVLSVILTLFVLLHKSKGGGLSDLFGGGV STSMGGTSMAERNLDRLTIVMGLLWLASIIVLLVLYSHS >gi|302034473|gb|GL383162.1| GENE 493 485425 - 486204 904 259 aa, chain - ## HITS:1 COG:MT1482 KEGG:ns NR:ns ## COG: MT1482 COG0149 # Protein_GI_number: 15840896 # Func_class: G Carbohydrate transport and metabolism # Function: Triosephosphate isomerase # Organism: Mycobacterium tuberculosis CDC1551 # 1 253 1 251 261 277 57.0 1e-74 MSRTPIMAGNWKMNLDHVAATSLVQDLGEALKAAGYDSSKSEAVVIPPFTDIRPVAIIID GDKLPIAYGAQDISAHDDGAYTGEVSGAMLSKLGCRYVVVGHSERREYHNESDELVNAKA KKVIENGMTPIICCGEALEVRKAGKHVEHTVGQIKADLDGISAEQVAKLVIAYEPIWAIG TGETATADDAQEVCQAIREAVKELYDAPTAEAVRIQYGGSVKPANVAEIMAKPDVDGALV GGASLKAGDFSKIVTFYEA >gi|302034473|gb|GL383162.1| GENE 494 486204 - 487412 1304 402 aa, chain - ## HITS:1 COG:Cgl1549 KEGG:ns NR:ns ## COG: Cgl1549 COG0126 # Protein_GI_number: 19552799 # Func_class: G Carbohydrate transport and metabolism # Function: 3-phosphoglycerate kinase # Organism: Corynebacterium glutamicum # 1 400 3 405 405 363 51.0 1e-100 MKSVEDLGDLRGKRVVIRCDFNVPLDGDKITDDGRIKAALPTLTQLHEAGARTTVLAHLG RPKGAVDPKYSLAPVAKRLGELMNLDVKLAGDVVGPSATKTSESLADGEIALVENVRFEK GETSKDEAERAELAQKYASFGEFYVSNGFGVVHRKQASVYDVAKLLPSAAGSLVAKEVEV LEGLTADPKRPFVVVLGGAKVADKLAVIDNLLKAADTLVIGGGMAYTFLKAKGLEVGDSL LDEDSIDACTKYLEQAKAAGKQILLPVDVRVVSDIDFEARTVGQIDVVPADEIPSDKMAV DIGPETEKAYANAIKGAKSVFWNGPMGVFEIKGLELGTKAVAQALTEVDGLSVVGGGDSA SAVRTLGFADDQFGHISTGGGASLELMEGKKLPGIAVLKENN >gi|302034473|gb|GL383162.1| GENE 495 487535 - 488542 1195 335 aa, chain - ## HITS:1 COG:Cgl1550 KEGG:ns NR:ns ## COG: Cgl1550 COG0057 # Protein_GI_number: 19552800 # Func_class: G Carbohydrate transport and metabolism # Function: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase # Organism: Corynebacterium glutamicum # 1 334 1 334 334 442 70.0 1e-124 MTVKVGINGFGRIGRNFFRALAEQGADLEVVAVNDLTDTKTLAHLLKYDSIMGRFSGEVS YDDDSITVDGKTIKVLAERNPADLPWKELGAEIVVESTGLFTDGEKAKAHFEAGAKKVII SAPGKNVDGTFVMGVNDGDYDNAKHNIISNASCTTNCLAPLAKVLNDAFGIERGIMTTVH AYTGDQRLQDAPHKDLRRARAAALNMIPTKTGAAQAVALVLPELKGKFDGLAVRVPTPTG SLTDLTFQTSKETTVEEVQAAVKKAAEGPLKGILAYTEDPIVSKDIEGDPHSSIFDATET KAIGNLVKVLSWYDNEWGYSNRLVDLTKLVASKLA >gi|302034473|gb|GL383162.1| GENE 496 488776 - 489765 481 329 aa, chain - ## HITS:1 COG:MT1466 KEGG:ns NR:ns ## COG: MT1466 COG1481 # Protein_GI_number: 15840880 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mycobacterium tuberculosis CDC1551 # 1 327 1 326 327 301 60.0 1e-81 MALTLQVKNELATVPVQKLCCRRSEIAATLRFAGGIHLVQHRHLTIEAEVDTGGAARRLR QSIQEVFGFDTDLVVVNGAGLHSNTRYLIRMVRGGADLARLTGLLDRRGRPVRGLPVPIV GGGRCCQAAAWRGAFLARGSLTEPGRSMAMEITAPGEEAAMALVGAARRLDITAKQRESR HVDRVTIRDGDAISAMLTRMGAHESVLAWEDRRLRREVRASANRLANFDDANLRRSARAA VTASARVERALEILGDSVPDHLRAAGRLRLEHRNASLEELGKVHEPPLTKDAIAGRIRRL LALADKTARSNGEPTTLESLPVEMRDDRG >gi|302034473|gb|GL383162.1| GENE 497 489822 - 490784 674 320 aa, chain - ## HITS:1 COG:ML0564 KEGG:ns NR:ns ## COG: ML0564 COG0391 # Protein_GI_number: 15827215 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mycobacterium leprae # 4 310 3 311 359 256 49.0 5e-68 MVSTPSKLPVVTAFGGGHGLAVSLRALRRLTDQLTAVVTVADNGGSSGRLRDEFDILPPG DLRRALAALCADDRLGRTWAEVLQARFNGTGELAGHAIGNLLIAGLWQELGDPVSGLDMV GQLLDVRGRVLPMSLTPLDISAQVVGLDPNRPDEEYTLTGQATIAKTRAEVLKVGLEPSE PDACPQVLEAIHASDNLVLGPGSWFTSVMPHLLVPQIVDAILESKARKILTLNVSGADET DGFSPARHLEVIAEHEPRMRFDVVLVDRGFAGQDPHLESFARNLGAEIVVDDLAMRDGSA RHDPLRLASAYANIMGVQPR >gi|302034473|gb|GL383162.1| GENE 498 490787 - 491662 652 291 aa, chain - ## HITS:1 COG:MT1464 KEGG:ns NR:ns ## COG: MT1464 COG1660 # Protein_GI_number: 15840878 # Func_class: R General function prediction only # Function: Predicted P-loop-containing kinase # Organism: Mycobacterium tuberculosis CDC1551 # 12 291 19 301 301 256 50.0 3e-68 MSTEQTTKTPRVVIITGISGAGRRTAAHAVEDLGWYVVDNLPPAMLGALVDEIAANNIDR LAVVLDVRSRIMFDALGVAVNALDERGIDPAIVFLEASDETIVRRQESSRRPLPLQQGGH LLDAVALERRMLSDLRAEADLVIDTTSITARQLAQRIDHAFAEGIDEGLAFQVMSFGFKR GVPIDADLVFDVRFLPNPYWVPELRPKTGLSSDVASYVMAQAGATEFIDRVEQLLGGMAP GYLREGKKQVTVAVGCTGGKHRSTAISEELSTRLAARGHRTAVLHRDLGKE >gi|302034473|gb|GL383162.1| GENE 499 491679 - 493697 1533 672 aa, chain - ## HITS:1 COG:ML0562 KEGG:ns NR:ns ## COG: ML0562 COG0322 # Protein_GI_number: 15827213 # Func_class: L Replication, recombination and repair # Function: Nuclease subunit of the excinuclease complex # Organism: Mycobacterium leprae # 1 649 1 641 647 716 57.0 0 MADPSSYRPAPGTIPTQPGVYRFSDAHGQVIYVGKAKNLRNRLNSYFQDISALHPRTQRM VTTAAHVQWTVVQNEVESLQLEYTWIKEFDPRFNVMYRDDKSYPWLCFTWTDEYPRVFVG RGAHHKGWRYYGPFGQAWAIRDTVETLLRVFPMRSCSTGVFNRAKNQGRPCLLGYIGKCS APCVERITSQAHREIADEFCDFMAGRTTKIVKRLESQMAEASENLEFERAAVIRDSLGAL SKTLERNAVVLGDGTDADVISMALDPLEVGVKIFHVRGGRIRGERGWVADRADDADEAEL METFLTQLYGVNASDGQVRDDGHGNAVPPLVIVSAEPTNPDVMSTILSSERGSHVEIRVP RRGDKATLMDTVTRNAQETLAQHKLKRASDLATRTRALEEIQESLGLDRAPLRIESYDIS HIQGTNVVGSMVVFEDGMPRKSEYRRFSIKGFEGSDDFAAMHEVLSRRLRRLIEDRDAMA AAQTPDGDVGSLIDPTTGSPRKFAYAPHLIVVDGGAPQVHAAQQVLEEFGLEDEIALCGL AKRLEEVWLPDEEWPVILPRTSEGLYLLQRLRDEAHRFAITFHRSKRSKAMVESVLDGVS GLGETRRKALVSHFGSVRSLRKATVDDIVEVPGFGPKLAGEVVAALSQDKPAEAINTATG EVVDANGPDAGR >gi|302034473|gb|GL383162.1| GENE 500 493890 - 495539 535 549 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3876 NR:ns ## KEGG: HMPREF0675_3876 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 549 1 549 549 1112 99.0 0 MTIEVVDDSARNVSKTWRKVTFSVVVPYRPEWVTEPIENMTSKTVGPAEVLDSLVSSSED ILQSSRDQAYEPHKYYFSRRIRDAVRMYRHAVYDATREDAIRTKVAERRKSHKGSILNIP EGLSYLGAERREYEDSLGAVAGGEAFHYAVLHFRLDDVTDAAVETAAAWLKRPGGDGARY LSGLLSDIGLGRCLYSWGGFSQGNAGCGRGKASSRDRGCGAGGAPFLNCNRIFVMTFAEV DPQDLRHPSYFGHHKAWTPAQAWLYHLATGGIGIYRGVPPSDTSDAANDGMFCLDATWVR IEEAGMAVMTQPVLLEESNRKHAGALCLLCHSRMLDIVILCLRQRTYLDRNAESEARVLV GKGHWGDEELDRLLDRERSVAAFLNGLWFTEVSGRREATLVLNEFQKVLGTPVLLTELRD EQESLVRVVEVHRRIDNVAMDKARKEQERRREQLEKAAEKRLEIIVLVLTVISTMLALLA LVSDPNLGLFAVGFILTGIVALIGGIRVKRLLRGDCEGQERQPCRFVTRRHHRETNVSPC SLAREQWPG >gi|302034473|gb|GL383162.1| GENE 501 495716 - 496462 525 248 aa, chain + ## HITS:1 COG:DR2564 KEGG:ns NR:ns ## COG: DR2564 COG0406 # Protein_GI_number: 15807548 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Deinococcus radiodurans # 1 228 40 263 270 73 31.0 4e-13 MHLLLIRHGQSENNAFAAQSVETYQQGRKPDPELTELGRRQAQALGKWIGSVSPRPTKLY ASPMMRTIQTADPVAEALDLPIIINDLIFERPGPVQIVDGVETGHPGSPRSALSAITDRA VFPESITEEGWREARIETAAEAADRAGRIAKWIRDTHNDDECIAIVAHGAIGSMMLLHLI APQLAAGLRNHSIGSEPHWIGLQNTATSMIELHPDGYEVHWINRVDHLIEAGMVHGAVAA STGNPGTR >gi|302034473|gb|GL383162.1| GENE 502 496478 - 496885 389 135 aa, chain + ## HITS:1 COG:Cgl2981 KEGG:ns NR:ns ## COG: Cgl2981 COG2146 # Protein_GI_number: 19554231 # Func_class: P Inorganic ion transport and metabolism; R General function prediction only # Function: Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases # Organism: Corynebacterium glutamicum # 43 133 26 114 116 65 39.0 2e-11 MSPTRREVLRTVGSVTALAATSAVAGCNTFQNSNDVHTGPATVKAADVPVGGGVVIDGTN FVVTQPTKGTFKGFVRVCPHAGCQVDEVHDGAILCPCHGSKFAITDGHVTQGPATSGLGK ATVTQKGETLTISGS >gi|302034473|gb|GL383162.1| GENE 503 496900 - 499869 2178 989 aa, chain - ## HITS:1 COG:Rv1638 KEGG:ns NR:ns ## COG: Rv1638 COG0178 # Protein_GI_number: 15608776 # Func_class: L Replication, recombination and repair # Function: Excinuclease ATPase subunit # Organism: Mycobacterium tuberculosis H37Rv # 4 949 1 955 972 1350 69.0 0 MTPVSDHIIVRGAREHNLRNVNLDLPRDAMIVFTGLSGSGKSSLAFDTIFAEGQRRYVES LSSYARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEIHDYLRLLWARVG KPHCPVCGELISRQTPQQIVDRLMALDEGTKFQVLAPVIRGRKGEYVELFRQLTTDGFTR VRVDGDVHRLGQVPPLDKKRKHDIDVVVDRIAVKPSAKQRLTESVETALGLAHGIVGVDF VDRDLSDPHRERRFSETMACPNQHDIDIEELEPRQFSFNGPWGACPTCSGLGATLEVDPE LVVPDSGLSLLEGAIAPWSGPRVANHYQHVFAGLAENHGFDATLPWSELPVKARKLVLHG DGDPVMISYRNRFGRVRTYSQNYEGVLHYVRRRYDEAETDSARSRWGQYLREVPCRDCHG KRLKPTSLAVTVGGRNIAEVSDMSIGEASEFLNALTLTEREATIAGRVIKEVRARLRFLV DVGLDYLTLSRSAGSLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRRLIDTL VRLRDLGNTLIVVEHDEDTIRMADWVVDVGPGAGEHGGEVVVSGTVDELLASERSVTGAY LSGKRSIPLPATRRPCTGRELVVRGARENNLKGMNVTFPLGQLVVVTGVSGSGKSTLVNQ ILYTSLAHRIHGARTVPGKHETITGVEEIDKVIHVDQSPIGRTPRSNPATYTGVFDKIRA LFAQTPEAKMRGYQPGRFSFNIKGGRCENCQGDGTIKIEMNFLPDVYVPCEVCHGARYNR ETLEVHYKGKTIAEVLDMPIEEACTFFEPISSIHRHFQTLVEVGLGYVRLGQPATTLSGG EAQRIKLASELQKRSTGRTLYVLDEPTTGLHFEDIRKLLLVLQRLVDQGNSVFVIEHNLD VIKTADWIIDMGPEGGNGGGTVVAEGTPEQVAAVEGSYTGQYLSEILAGHEVAVGDEPAL VEAPADAGKRKTTARRKAKKTTSPRKKSR >gi|302034473|gb|GL383162.1| GENE 504 500011 - 500754 464 247 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3873 NR:ns ## KEGG: HMPREF0675_3873 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 247 64 310 310 471 100.0 1e-131 MSAAQRPPGLCPSAPLHVIRAAKREATQRLLGATMGLSDDEWQAPSRLAGWTRAHIATHI ARNAEAFEAVTKAVITNQKVPHLYPSDELRDRDIERGSERAGLQLQIDLDTTAGSLNTTF DALDDMEPGTAVWLTNDIRVDVTDLPALRLAEIALHHVDLDLGMTVDDLPDVSARTLLEW VCFRLRDRPEVPAMRIVSDSGLTDRIGGVGFATTVHGPDGALAGWLSGRGGTERLAGADQ LAVPMLI >gi|302034473|gb|GL383162.1| GENE 505 500800 - 501456 433 218 aa, chain + ## HITS:1 COG:ML1391 KEGG:ns NR:ns ## COG: ML1391 COG0491 # Protein_GI_number: 15827726 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Mycobacterium leprae # 5 218 14 232 232 144 41.0 9e-35 MPLYHVDPGSEAALIKVNDDVDLIKISVGTMDNNAYLIHPGAGPAILVDAAAEPGRLKAL IGDDEVGAVITTHRHQDHTGALAEIVTMTGAQPWCGEPDAEAIEATTGVTCRTMWDGDLF RLGDVELDVIGLVGHTRGSIALRLHGNPSDHVLTGDSLFPGRLGKTSGSREFESLYTDVC MKIFAPASDTTVIHPGHGDATTVGEERPNLPLWRARGW >gi|302034473|gb|GL383162.1| GENE 506 501465 - 502454 850 329 aa, chain - ## HITS:1 COG:Cgl1921 KEGG:ns NR:ns ## COG: Cgl1921 COG0861 # Protein_GI_number: 19553171 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane protein TerC, possibly involved in tellurium resistance # Organism: Corynebacterium glutamicum # 1 324 1 329 369 239 43.0 5e-63 MHVHAYVWIITILVMGALLFFDVLVLGRNPHIPSAKECATFVGVFVGLAVLFGLGVWILQ GHAAGGQFFAVWLTEYSLSIDNLFIFLILMEKFNVPRKLQQFALLVGIIVALVFRGVFIA LGQAILEAWAWVFFIFGAFLLYSAIDQVREYRHRDDDDDEDPGEDGRFMAWFRRTVPATG DYRGTKFFVRENGKTLATSMFMVCVALGATDLLFALDSIPASYGLTSEGYLILTANVFAL MGLRQLYFLIGSLLERLVYLSLGLAVILGFIALKLIGHAMHHYGLDQAWFGFSSEVSIGV SLGVIAVTLALTTVASLIKSRKDDATADV >gi|302034473|gb|GL383162.1| GENE 507 502648 - 504753 1770 701 aa, chain - ## HITS:1 COG:MT1669 KEGG:ns NR:ns ## COG: MT1669 COG0556 # Protein_GI_number: 15841088 # Func_class: L Replication, recombination and repair # Function: Helicase subunit of the DNA excision repair complex # Organism: Mycobacterium tuberculosis CDC1551 # 2 696 36 733 739 918 70.0 0 MRPVTDITRRVAPFHVVSEFQPSGDQPQAIAELEKRVNSGEQDVVLLGATGTGKTATVAW LAERLQRPMLVMQPNKTLAAQFAQELRTFFPDNAVEYFVSYYDYYQPEAYIPQTDTYIEK DSSLNKEVERLRHSATNSLLTRRDVIVVSTVSAIYGLGTPQEYVDRMIPLEVGQEWDRDE LLRDLVTNQYVRNDISGERGTFRVRGDTLEIFPVYEENALRVEFFGDEIEALTTMHPLTG EIISEDEQVYVFPATHYVAGPERMERAIASIQQELEERLAVLERDGKLLEAQRLRMRTTY DIEMMQQVGACAGIENYSRHIDGRAPGSAPNCLLDYFPEDFVLVIDESHVTVPQIGGMYE GDMSRKRTLVEHGFRLPSAMDNRPLKFDEFTQRIGQTVYLSATPGSYETERAHGVVEQII RPTGLVDPEIIVKPTRGQIDDLMGEIRTRVDRGDRVLVTTLTKKMAEDLTDYLMEHGIRT RYLHSEIDTLKRIELLKELRMGEFDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSER SLIQTVGRAARNVNGQVIMYADQITDSMQVAIDETNRRRDIQMAYNKEHGIDPQPLRKKI GDITEMLAREGADTDELVEKFNYGKGHRGYNSMITDEQRAAQGRRLDVSKMAEEDLGKLI VDLTTEMRSAAGELKFEVAARLRDEIADLKKELRQMVEANR >gi|302034473|gb|GL383162.1| GENE 508 504865 - 505209 170 114 aa, chain + ## HITS:1 COG:no KEGG:PPA0802 NR:ns ## KEGG: PPA0802 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 22 114 1 93 93 173 96.0 2e-42 MTLSLLLAMKRFSRRSYKEEIVSTVWRHFAAVPITGLLLASTATIAMADTVNPPEGGVWR YGRGYSDYFHGSKKHGSSVQGVNFVRSPCVKAGSWSYARTDAARFGNKAWYRTC >gi|302034473|gb|GL383162.1| GENE 509 505616 - 505855 106 79 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|314925323|gb|EFS89154.1| ## NR: gi|314925323|gb|EFS89154.1| hypothetical protein HMPREF9606_01686 [Propionibacterium acnes HL036PA3] # 1 79 1 79 79 138 98.0 1e-31 MTRATNAPHHPAVRLDDVRIMAGNESQVHLALYRGAKPQCTHSGGECGGIGGVAVDEVLA AAIGGLILIHVGDMGDHLR >gi|302034473|gb|GL383162.1| GENE 510 505854 - 506792 341 312 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3868 NR:ns ## KEGG: HMPREF0675_3868 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 45 312 1 268 268 496 99.0 1e-139 MAAVFARTRRYGILRLHGHSWLHHASRETLHAVSVAAIGIGATALISVPILGFYNGLAQW MRWFRWSVQIWILSVAVLLTVEIVTLAIAWSSAEILAQVKGRMTSLPVFSASYLLRFPVA MLAILLIVSVTSATRELWRYEDQQAQWATVDRHVGRVALRGIGSAVIDAASEKRMVDAVG AWLSDVDEHHRLIVANLSPVDVGLPAPIQLFIINDEYCQRHPVPACASSPNVSTVTGTVP VSLSSVEPRIRHAIAQQLSAPAKAGKATIKWSRQEGSHDYFTYGPQSPEQGLSATMTDPV MIRVPLRTIVRR >gi|302034473|gb|GL383162.1| GENE 511 507022 - 507324 113 100 aa, chain + ## HITS:1 COG:no KEGG:PPA0798 NR:ns ## KEGG: PPA0798 # Name: not_defined # Def: putative permease # Organism: P.acnes # Pathway: not_defined # 1 100 70 169 169 172 100.0 3e-42 MYSTVHRQRSLVRKLHGWSGLYMFRQVVAWETGLWGTLAIVIAWRSVTSWQAGRTESIAE GRRPHDLLSWAYTAPWAWAGTAGVGIATLSILSYAGSIEH >gi|302034473|gb|GL383162.1| GENE 512 507166 - 507624 172 152 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVSRRTRLCRRRGMVRMSVPSITMWPLSGRMRRTIVDNRIDFPQPLGPRRAIISPPDAWK SWPFQRVLEPKVLERFSTRNTGLFSFMVAVPFIVVMLRASSMFDRTCIGENAQSRDSHAC RACPSPRCGVSPGQQVMGSPSLRDGFGSSSLP >gi|302034473|gb|GL383162.1| GENE 513 507995 - 508345 202 116 aa, chain - ## HITS:1 COG:no KEGG:PPA0784 NR:ns ## KEGG: PPA0784 # Name: not_defined # Def: ABC-type transport system, fused ATPase and permease # Organism: P.acnes # Pathway: not_defined # 40 83 447 490 556 80 95.0 3e-14 MKEQALIGARGLVSPSLCIPVLQSVSCYRGAAVMPFSRRLWRVLGEVGLADEVRGMEAGL RTVVGSGGTRLSGGQAQRLTVARNLPTGVGRTWSRILRASLPVPWREAVGQLMVVQ >gi|302034473|gb|GL383162.1| GENE 514 508581 - 508820 101 79 aa, chain - ## HITS:1 COG:no KEGG:PPA2406 NR:ns ## KEGG: PPA2406 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 79 1 79 79 147 100.0 2e-34 MPQPTIVMASIAAIAALMRFQAVFCVCNCSTPVIMCAVSLFWLLGPVEGVRVKGYRRKNS PHPDLFDGPVVDGMNDIPP >gi|302034473|gb|GL383162.1| GENE 515 508738 - 509751 508 337 aa, chain + ## HITS:1 COG:lin2525 KEGG:ns NR:ns ## COG: lin2525 COG0614 # Protein_GI_number: 16801587 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Listeria innocua # 11 327 7 319 323 95 23.0 2e-19 MHTQKTAWKRISAAIAAILAMTMVGCGTSDPSKGGESRAEEAKTSFSVTDSFGHKVDFKT RPQRVCLLSATLLSIWYDLGGTAACTPSLTGNEKLQPAHAAAIKKVPKVGMIYAVNLERI LATNPDLVIAPGAVSQNVTDKLSSQGIPVLNIKTRSLDEVLQTYQTLGKVLGHTKEAKKR SSQISAQVKSTVNKMPADGKRVAILFATATSISLKLNNSIAGSMAKLLKLKNIASSAIPD DPNAETATLSVEKITQQQPDIIMVTSMVQNNALARQIVNRELTSNPSWQAVDAVRKKKII YLPQQYFLFNGGPNYPDSVAYMAASVHPEIFGKPIEP >gi|302034473|gb|GL383162.1| GENE 516 510168 - 511601 234 477 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 215 445 276 511 563 94 27 7e-18 MAFIGAMLAAMAIYALAWRGGVQPLRIILSGVAVSALCGAGISAVMVLMADNVQGALMFM NGSLAMRSWAEVSVIWPYTVVGIIAAVVLSRRLDIITLGDQVAQGMGMNVQANRLVLTAV AALLAASTVSAIGLLGFVGLIVPHIMRLIVGNRHVILVPACVLAGAALVMLSDTCSRVIF DPFEIPVGIMLTALGVPFFFSSSERHCEMGNIMETPILSGSHLNVTLGNHKILNDVSVSF QAGVMHAILGPNGSGKTTLVRTLCGALSPESGSVKFDGTDLSTMSASCIARRIAIVWQSA TAPSDLTVRHLVGYGRYAHTPWWQIRDTSADNHVEQAMELADVTCFADRRVTTLSGGERQ KVWLAAALAQEPTVLILDEPTTYLDVTHQLRVLDLVRSLNQERGITVIAVMHDLTQAARY CDRCAILKNGQLTLEGPPDALSSGPIEENFDIEAWITTDPQGKLPVIQPRRPLKEAR >gi|302034473|gb|GL383162.1| GENE 517 511598 - 515431 1247 1277 aa, chain + ## HITS:1 COG:MTH456 KEGG:ns NR:ns ## COG: MTH456 COG1429 # Protein_GI_number: 15678484 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin biosynthesis protein CobN and related Mg-chelatases # Organism: Methanothermobacter thermautotrophicus # 380 1268 2 859 859 526 36.0 1e-148 MKITFLTVFPDLVKHVSEAAKTIDPSHDLLELHFFNSTTRPTPEELEALTRAIHDSDIVV LDAMGGDPQWIRATRLTLDDFDGAVLSWGAEFIDKVRLGSFSMATARNAIEKTDSHADMK HMPPDMKSMLGNTGAQKSIKGILNSAKKMIPIITEMGSSTDSGGEISGINRVHATVKGMR TAPKFMADAKRFSALGKAFHSMREPQADFFLRHLLHFDGGHPEVVVPTPPEALAPASVGA PWPSRHFSTVEKYRQECDAPHGRPTVVLLYSGLTYPYDSNDVVRALMDSLRKDCWVVPIS IVAAGGESLEALRTLLSEAAPKLIISMQGFRIGGGAMGGDVDSSTAMLKSINAPIMHPLI LSRYTEKQWNESRHGLGQSEAMVMLMLPEMDGCLAEIPIAAMTEPAQNTTTGVVTSVLVP IPKQIERFARRVRGQLRLSTTPAPQKRIALIGYDYPAGEGNLLNGAFLDVSESMAAIMRE LSHRGYQTKTPSGQQLLNDLLAQAVNSPEYSQTVRPKTYLRADAEQDLPHPRAWQSMDET HPSPSDCPMTTPEGDFIIPAVDYGNVLVGIQPGRGSVKMATTDTHDTTRPPHPQYAGFYT WLSQIWKPDVIIHVGTHGTLEFLQGKENAVSAECFPDMLIGDIPHVYIYYCGNAAEGLIA RRRAHAVLVSYQPPVMQPTRLDGELAELDDLISEYRRSVTLMPQTSAELLEQVHGRATAL HLPTDLDELEVELARTKRSLVPMGLHVWGQAYTPQEARLMVRGMAEHGSFDGELAPALSP SEQAKVVGKVLGEVSDSSNETSLPEKSVEPKNPEDEALTQGVGYLASWARNLYARLQHND EIEGLFHALEGRHVDARLGGDPIRNPEVLPSGHSLYQFDSRRVPTPIAVRRGRDIANHVC SAYRASHDGADPTTIAVVLWGLETTRTQGETYAQILSLLGVRSLTPRRPNSPHWEIIPSN ELERPRVDVVVTICGFFRDLFSNLIDELDDILHAVAALDEPADINPLAARTRQQAQAMRQ SGEPEERIEALAHARIFGPPPGQYGSGLTDIVDSGQWQSPEDLATAFTAASGHVYTRYDH GSHTDGLYDSRLKDVDLVSQTRSSNEYEITDLDHYFEYLGGLGNSVRAAKGTSIPILVTD TTQDEVYTTSVGRAAAKGLRTRLLNKDWMEAMLAHGHRGVTEIEKRVTNLVGLAATTDQI DDWMFDEVCDTYIDDPEMVQRLSTLNPHSLASMAQRMVEAHDRSLWNASAEHLDKLHDLT FKLDSSLEAGTQEIDYP >gi|302034473|gb|GL383162.1| GENE 518 515587 - 516000 315 137 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3860 NR:ns ## KEGG: HMPREF0675_3860 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 137 1 137 137 239 100.0 2e-62 MTPSGNVSKDLDVKTKVIKGAGLAITVDKGKQQVTFQTVDPKTKKPMKDWYMFNEKAQTL SWHKWVSAMGQAFDYTFSLTTHKMTKIKDFHHNDITPQVKQMGFWKPAQDSTSDAEKRLE KYFKNRYGMTIKQAASA >gi|302034473|gb|GL383162.1| GENE 519 516000 - 517802 78 600 aa, chain + ## HITS:1 COG:MA0877_2 KEGG:ns NR:ns ## COG: MA0877_2 COG1240 # Protein_GI_number: 20089761 # Func_class: H Coenzyme transport and metabolism # Function: Mg-chelatase subunit ChlD # Organism: Methanosarcina acetivorans str.C2A # 275 591 3 307 320 178 35.0 3e-44 MPRHFPFVAIVGQSEPRLALTLLAIDPMIGGVLITGPLGTAKSTCARSFVDLVPGIVVRD VTAGTTVDRLIGSMDLEAALASGRRRDHVGLLTEAQALCADDVNLFDDAVTAALIGRPED LPLIATMAVGADTVHPQLLDRFGLCAVTVPCRNPKDRELIVNHRLTFDDGPDSFITTCTD ATNEVVNRICAARNKLPDLEWTDAARNKFTELLTQAHAPGQRADLGLARSATAYAAWRGD NNVVVEDVTAVAELVLRHRRRNLSSSQAPSPDLNDAHSHSGPSSPHDGNEQLDEKGHDDS TAASPRVIAPEETFNVLTSTPAAYDRTQRRARGRRMVTRSADLRGHVISSQPTRQPVDLS LPATLRAAAPHQRARRASGEGRDGLSVVVKRSDWRRKVRESRTSTLVVFIVDASGSMGAR GRMAASKAAVIGLLQDAYVKRDRVAVITFSGNNAQVIVPATSSIERAQRLLTTMAVGGQT PLASGLSCAGRLIETELRRDSTLRPVAIVVTDGGGNVGLDGRVDRTATNQASDVAQTLSD DTRTSWIIVDTSVNRVHQRDCEALSGILHAPRMTIDDLQSGVFIPFIRSTSRALSYSQRD >gi|302034473|gb|GL383162.1| GENE 520 517804 - 518784 306 326 aa, chain + ## HITS:1 COG:MA0877_1 KEGG:ns NR:ns ## COG: MA0877_1 COG1239 # Protein_GI_number: 20089761 # Func_class: H Coenzyme transport and metabolism # Function: Mg-chelatase subunit ChlI # Organism: Methanosarcina acetivorans str.C2A # 6 315 9 322 384 333 53.0 2e-91 MEKPIYPFAAIVGQEEMKLSLILCAIYPRLSGVLIQGDKGTAKSTAVRGMAQIMPTISQV DDVYHLSADEQHIYGDPLGVPSCTNLQLRQVPVVELPVGVTEDRVAGTLDVETALVRGQQ RFQPGLLASAHRGILYVDEVNLLDDHIVDILLDSAAMGVNTVEREGMSVIHPSRFSLVGT MNPEEGQLRPQLLDRFGLCVTVQGETDPEVRMEIVQRRLSFEDDPDGFITEWSSHSRRLA ERIENAMTLVQSVEIPKNILSTAVQICLDSNIDGHRGDITIIHAARALAAWAGRDRIIQD DLEKVAPLVLNHRLQYASGVARAPRG >gi|302034473|gb|GL383162.1| GENE 521 519244 - 520815 570 523 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3857 NR:ns ## KEGG: HMPREF0675_3857 # Name: not_defined # Def: HtaA # Organism: P.acnes_SK137 # Pathway: not_defined # 1 523 30 552 552 825 99.0 0 MVSIVSRATRVVRLAAVAAVAASVGMSTGPAWADQPDADQSQRQVALGAMQWTINSHFLN ALKMMMHGSWSTSSGASWNGKAFSFPVSKGSLSSTAQKADVKYSGSVHFTGVGGRMDLTL ADPEIVVNNGDDHVIMSVKSKTMVGQSVDYGRITFVDMTGSITQGQNDAAQVVGTNVKLN SQAVDAFAGFYQAGKPMDDIDSSLKLGPQSSRPEPTVTPKPSVTPKPSVKPKPTVAPKPS VKPKPRVSPKPSAKPKPTVAPKPDQSTIMAPQSDAATEAAAGEAPSAGAHKIIRKQVCTV VPGASRATSPTSTPAKVGKGSMNWGVSTSFVNALKGPMQGKWTMSGGASADGTRFNFPFS GGNYDRATKTGNLNFSGGVHFTGVHGLLDLSLSDPSLSLKNGKGVMKLTLNAGGMAPFKG RVDFANVSVVPSGSGFTATSVVLTGNGVQVWNGFYKKGHSMDNFSVSLGDKSDSASAAKQ NSASLVKKSAASPTKRECHDVLVDAKTGQIISGSSGSLPNTGV >gi|302034473|gb|GL383162.1| GENE 522 521333 - 522040 571 235 aa, chain - ## HITS:1 COG:Rv1631_1 KEGG:ns NR:ns ## COG: Rv1631_1 COG0237 # Protein_GI_number: 15608769 # Func_class: H Coenzyme transport and metabolism # Function: Dephospho-CoA kinase # Organism: Mycobacterium tuberculosis H37Rv # 27 220 1 191 230 143 48.0 2e-34 MRRTVVGDETTARDVARAGWVAGADGVVRVGLTGGIASGKSTVSQMLGERGAVIIDYDRL SRDVVAVGTQGLARVVEAFGREVLVADGSLNRSALGSIVFADLQARRRLEAIIHPLVEEA AHRVDEEARAADGLVVVVHDIPLLVETGRADEFDVVMVTDVDPAEQVRRVVERDGCSQAD AWARIRAQASREERLAVADVVIDTSVPLEDLPAQIDRVWSQIGGALRFDRRRGKM >gi|302034473|gb|GL383162.1| GENE 523 522069 - 523739 948 556 aa, chain - ## HITS:1 COG:STM0956 KEGG:ns NR:ns ## COG: STM0956 COG4987 # Protein_GI_number: 16764317 # Func_class: C Energy production and conversion; O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components # Organism: Salmonella typhimurium LT2 # 30 552 24 552 573 191 28.0 4e-48 MTEPSTCQVMRWLTSITRPVHPPLYFSALMRVVHLLADIGLFAMAAGGMVAVVTAGWSAW AWLGWVVGLAAVQALAYYLEQFSGHYVAFKALEILRTYAFSQLWPKAPAVVSHSRTGDVL ASLTRDVERIEVVYTHTFAPVVAAIVAPLVAVVTGGVLYGWFVVAIPAVILVVLIVALLV IGTRASLDATHEMLGVRRELAAHFTDSVFGAAEIVGYGRQSDRIMQMARLDADIATGSAK ARRYAAMRRASCVAATMGIVAWVSVVGVSGGVDGIGVCVLVVAGLRVVEGLRGVEDAVGY LDHSLAAARRLWCLSYSPVEVVDGPEELCLDHAPALEWRGVSFCYRDADGVPLPAVLEDV TLGVPAGGHVVVTGASGSGKTTLVNLLLRHHDPDVGQVLVDGEPVSSFTLDSLRRCVGVV SQRVELLNASIADNLRLVVPAAGDGELWRVLGEVGLADEVRGMEAGLRTVVGPAGTRLSG GQAQRLTVARVILQRPRVLILDEFTASVDPDLAAEIRVNLARCLPGVTVVEISHECDCGG ETVVLDRGRVVKHLRR >gi|302034473|gb|GL383162.1| GENE 524 523736 - 525466 214 576 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 345 569 2 234 245 87 31 1e-15 MSGSVSVMSPQSGSRARRVAAVHIVEVVATCLFLVAVGQIIGGRFEDFAPAPGWYWAMGI GGVVAAVAAGAAVSMSGRHARAEEAALHAKVLDVLYRRSLTGPPAADEGERVITLATDNV ERVSEYRQVFLPDILAALATPVLVCLVILVGLDWFTGLVVLLACPLIPTLIGGFVKLFRK RSSDSRRERARLTARYLDALSNLVLIRMLGAGQRVEDDLRRRGETNRGTIMKLLAGNQIV IVVVDGLFSLLFIAMAAGLATTRWQGGDISATSAITIVLLSVLLLEPLHQVAAFFYIGMG GIASQKALRKWFDAAPSALMTSDSASSTPTPQRSAHVPVPEDGTIWLRNVSVGYGETEVL HGVSLDITHGGRTAIIGRSGAGKSTLLSVLSGTLPPKSGEVYVSGLDALTAAPGAIRSIS ASVNQRTWLFAGTVADNLAIANPNATREQMWDALRRAGVADEVEAMPKGLDSDVGEQGRL MSGGQAQRISLARAFLSGRNILLLDEPTSHVDVDSERRIIDAISQISDNTTVVMVTHRRR LLRLAHDVQRVSAGTLLPADDVDSIEDDRTETEDWA >gi|302034473|gb|GL383162.1| GENE 525 525469 - 526248 203 259 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 1 221 278 509 563 82 28 3e-14 MIRARDVTFCYGERRILDGINLDVQAGEFVGLLGPNGAGKSTLLSVLCGDLEGWQGTVEL DGAPLQKLSRPQLALRRSVMPQFSEFPFSYLVHDIVMMGRSPHPRGPDDAVIVDRAMERT EVTDLVDREVTRLSGGERARVTLARVLAQQAPCVFLDEPTAALDICHQERTMAICHELAD AGCAVVAVMHDVALAAACCDRIALLSGGKILAVGPAVEVLTEDNLTTVYRWPIEVVALPG GELVILPRRARTASHDERR >gi|302034473|gb|GL383162.1| GENE 526 526245 - 527306 770 353 aa, chain - ## HITS:1 COG:Cgl0386 KEGG:ns NR:ns ## COG: Cgl0386 COG0609 # Protein_GI_number: 19551636 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Corynebacterium glutamicum # 13 346 19 353 358 293 54.0 4e-79 MSALSQPVVQRSGIERRTRVRVISTICLVIIVCGLVLLSAMVGQYRVEAADVIKIVFGRS ATDAMAESVLWQIRFPRIVLGLLVGASLAVAGAVMQALFSNPLAEPGVIGVSSGAAVGAS IMIVVAPNFLSGFGVPAAAFVSGLLAASSVYIMARSGRRAESTTLVLTGIAVTAVCSAIT SISTYVAPTTARDQIVFWQMGSLSGTTWSHVATVGTVASVGIVWAILIAGKLDTLALGER AAGHLGVNVNRLRLSSIALTALLTSAAVAYAGVITFVGLIVPHVLRLLIGPANKWLIPSA LLGGCLLVTLSDIAARTVVPYADLPIGIFTAIVGGPTFFILLRRGMGGEKALG >gi|302034473|gb|GL383162.1| GENE 527 527303 - 528415 720 370 aa, chain - ## HITS:1 COG:Cgl0385 KEGG:ns NR:ns ## COG: Cgl0385 COG4558 # Protein_GI_number: 19551635 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type hemin transport system, periplasmic component # Organism: Corynebacterium glutamicum # 55 367 42 354 359 287 48.0 3e-77 MIRMYRRVAGVGLALTMLVAGCGHSSSTSQGPATSSTPVPSVATSSTRAASATSQAARDL PDPHTLRGLTEVPELPDPKPVEGSSAQKLPVTVTDVEGNKVTIKSTSRILALDLYGTLSR TLIGLGLGDKIVGRTVSSTEKQLHDRPVVTENGHVLNVEAVAGLKPSVIIADRSVGPKEA LDQLRKSGIPVVLVDPHRSVGSTPQLIRTIADAVGKPDAGEALVKRTQEQIDQAKKQIAA WKPAKPMRVAFLYVRGNAGVFFILGSENGASELIQGVGADDVASDKGITTLVPANAESLV SINPDAIFVMRDGLASTGGMKGLLARAGVANTTAGRKQRVISIPDGISLSFGPQTGEVLT AVAKALYGVK >gi|302034473|gb|GL383162.1| GENE 528 528528 - 529931 921 467 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3848 NR:ns ## KEGG: HMPREF0675_3848 # Name: not_defined # Def: HtaA # Organism: P.acnes_SK137 # Pathway: not_defined # 1 467 12 478 478 813 100.0 0 MTTSAMRKIVASVLGAILALTGVLITPAAWAAGPTVTVIPVGREGGDITISGKGFSTTGF GVYVAVAPASVPEFYGNSDKFYGYDPSKDTTESPSTIWVYTPSQKAIGSRFAQGRPMNND GSFTITMKAPPFEQGKDFVVLTTKAHGVGKTDHSDDTRTPVTYREATPAPTGPKTPIAPS KQPSKQAAPSKQVKPSKQAGPNKQSTTPQQKTAEHRSQTPAAHRTMTKQVCTIGASKVTS GSLTWGIRTSFTSYLRGPIANGSWKLSGGANWNGSAFTFPLTSGSFDPATKSGSLKYSGS VHMTGHHGILDMTLAEPSLQIKGSTGHLYLDVKSSSMDGKKTNYGRVDFATFGVSVSGNA AIKGSPVKLTATGAKAFAGFYRAGEPMNPLSTNLTLSAEKVCHNVTVDAVTGKVIGDDSG KGAGRGLPVTGAEGPSSDEIDLGIVGGLALTAVVSTVVVCRRYAARI >gi|302034473|gb|GL383162.1| GENE 529 530152 - 531648 2531 498 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|50842265|ref|YP_055492.1| 30S ribosomal protein S1 [Propionibacterium acnes KPA171202] # 1 498 1 498 498 979 100 0.0 MTSSTEASTSNPVDTDQQNVANTADGSVAVDDLGSPEAFLAAVDATIKYFNDGDIVSGTV VKVDRDEVLLDIGYKTEGVIPSKELSIKHDVDPFEVVNVGDEIEALVQQKEDKEGRLILS KKRAQYERAWGTIEQIKEEDGVVTGTVIEVVKGGLIVDIGLRGFLPASLVEMRRVRDLQP YVGQEIEAKIIELDKNRNNVVLSRRAWLEQTQSEVRQNFLHQLQKGQIRKGVVSSIVNFG AFVDLGGVDGLVHVSELSWKHIDHPSEVVEVGQPVTVEVLDVDMDRERVSLSLKATQEDP WQAFARLHQIGQIVPGKVTKLVPFGAFVRVEDGIEGLVHVSELAERHVEIPEQVVSVNDD VMVKIIDIDLDRRRISLSLKQANEGIDVESDEFDPSLYGMAASYDEDGNYIYPEGFDPET NEWKPGYDEQRIAWEQQYAEAQARWEAHRKQVIEAEQADQEAALTDGGAQSSYTSGPAEG SLASDEALQALRDKLTHN >gi|302034473|gb|GL383162.1| GENE 530 531973 - 532749 650 258 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3846 NR:ns ## KEGG: HMPREF0675_3846 # Name: not_defined # Def: sortase family protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 258 1 258 258 406 99.0 1e-112 MTDRSPRRQEPSTRSTPSNSSTTHAGDSAQPGGPKWRIVALVVVIALIIAAIAVIFIQRN NDSDSAAGAASSTTATTTSSTSGIPAASAAKKGPVPAGCMKTPKPIVPVKYSIDGMKASA KVLSRGVDETGAAGAPPKNDSSSMAWFNQGPKIGSDKGNTVLTAHTYHKGGALGNRLYDK NNGIKKGDIIRLTDKTGQTVCYRYDHDTKVMVKDYNPNSNILYDNNGPAQAAIVICWDYV KKTGEFDSRVIFYAYPVA >gi|302034473|gb|GL383162.1| GENE 531 532829 - 535033 1103 734 aa, chain + ## HITS:1 COG:PA4772_1 KEGG:ns NR:ns ## COG: PA4772_1 COG0277 # Protein_GI_number: 15599966 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Pseudomonas aeruginosa # 29 518 23 513 513 370 41.0 1e-102 MNRSARSPFPSSLLTDLLEALGESKVSQDPLDLAAVAPDASHYLLTPSVLVRAGSTSDVA AAMAAAKRHKVAVNFRSGGTSLSGQGLTNGVMVDARRSFRGIEVLDGGRKVRVQPGATIV AVNSVLARYGRKLGPDPASSVACTLGGVLADNSSGMSCGTVANSYRTLDSMIFVLASGTV IDTADPQCEDKLAHDEPELVETLMALRDQCREQARADEITFQFSRKNTMGYGLNAFLDYD TPAQILSHLMIGSEGTLGFISSAVMNTVKIMPNLATALLHFPTLDAATKALPALVKSGVT VTELMDSSSLQLCRDDPVNGHIIPPAPGSGDAALLVEYHCPDRKSRNEAVAAGNSVTSEL DLVNKPTFTDDPAVRGPIWTLRSGLYAKVAGTRQSGQTALLEDIAVPVENLAAVCEDLQQ LFSEHNYPESIIFGHAKDGNIHFLVIEDFRNKAGLDRYEKFTEDMVTLVLNTHGTLKAEH GTGRIMAPFVARQYGPDLYRIMRQVKKSVDPAGVLNRGTIITDDPKLHLKEVKLTPTVQD EVDRCVECGYCEPVCPSRDLTLTPRQRIVMQRAIAQARADGDEVLATDLEERATYPVVQT CAVDGMCQTNCPVHINTGDLVRRLRAEHNPAAWQATWDLAAKGWGPFVTAASAGMSAIKP VPAAATNVLTGAARAVLGADRIPQVSDELPGGGKRRSSGHRSAPHGRPEVVYLRPVSTPC SVASCRARRQPSLR >gi|302034473|gb|GL383162.1| GENE 532 534973 - 535671 271 232 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167010850|ref|ZP_02275781.1| ribosomal protein L36, putative [Francisella tularensis subsp. holarctica FSC200] # 1 222 215 429 436 108 29 4e-22 CVNTMFGGVMPGEKTTEFAIISLLTAAGIGVTVPEGINSLCCGTPWKSKGMTQGYATMRR RVVDIMRQSTRDGELTVISDAVSCSEGFVHELEYEGVKDIRVVDAVQYVADEVLPIMPGL PKVASAALHPTCSSTRIDWNASLQRCAEAVADEVVVADAWGCCGFAGDRGMLHPELTKSA TRREATELAEREFDLYLSANRTCELGMERATGKPWRHALSVLAERMVEYAPA >gi|302034473|gb|GL383162.1| GENE 533 535834 - 538581 2165 915 aa, chain - ## HITS:1 COG:ML1381_2 KEGG:ns NR:ns ## COG: ML1381_2 COG0749 # Protein_GI_number: 15827719 # Func_class: L Replication, recombination and repair # Function: DNA polymerase I - 3'-5' exonuclease and polymerase domains # Organism: Mycobacterium leprae # 354 915 9 578 578 567 53.0 1e-161 MKHATVCHLDRIPLSVASSKVNDMSETTQPILMVLDGHSMAFRAFYALPVENFTTSTGQH TNAVHGFVAMLINLLRNEKPTHVAVAWDLAGGTFRTTEYSEYKAGRAAIPPEFPGQIDLI KEVLDALRIVHLSKENYEADDILATLSTRATTEGFKTLLVSGDRDAMQLVNDQVTVLYPR KGVSDLARMTPEAVEEKYLVPPARYPELAALVGESADHLLGVPGVGPKTAVKWLTAYDGL ENLIRQADTVKGKAGQSFRDHLDDVIRNRKLNALVRDLDLDLTLAELARHPWDPKATRAV FDTLEFRTLWDRVRALATESDADGVDEVDDTLEISGTVLEPRTLNDWLSTTAGRIGVDVT GSWGSGSGDVEAVALGGVDGNAVWFDAAELSPEDEDVFAAWLADKDRPKVMHSAKGPVEA LAERGWEVAGLTCDTELASYLLHPDRRAHKFDDAVRTHLNVALGEAEENSDQAMLDFGED HFAESMERAVAVTRLADVMEKEVEARGGAELLHDVEMGVQRCLISMERAGIAVDTDIFEG LRSEFDERVTRAQEAAWEAAGEKINLSSPKQLQGVLFDKLDMPKTRRTKSGYTTDADALA GLYETTEHPFLAHLLEHRDAIKLRQTVDGLLKEIRDDGRVHTTYMQTVAVTGRLSSKDPN LQNIPMRTEEGRRIREGFVVGEGYESLLSADYSQIEMRIMAHVSGDQSLIDAFQSGQDFH TVTASHVFGVAPEDVSVAQRSKIKAMNYGLAYGLSAYGLSNQLKVSVGEAKELMADYFSR FGKVHEYLEEVVDQARRQGYTETLLGRRRYLPDLTSTNRQRRDMAERAALNAPIQGSAAD LIKLAMLATDQKLAEAALTSRVLLQVHDELILEVAKGEEEKVREIVTNAMGHAMDLSVPL TVSIGVGRSWFDAAH >gi|302034473|gb|GL383162.1| GENE 534 538584 - 538997 176 137 aa, chain + ## HITS:1 COG:PA1618 KEGG:ns NR:ns ## COG: PA1618 COG2050 # Protein_GI_number: 15596815 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized protein, possibly involved in aromatic compounds catabolism # Organism: Pseudomonas aeruginosa # 21 137 21 138 145 72 34.0 3e-13 MTYSVPEHPLPDWLAQLVSPLDDKLGVKVREISPHRCVVTAPLDGNTQPMGLWHGGGSGV LVETAGSLAAMAHARTLEHSAVGTELSVSHLRPPHGHQVIATATAVHLGKRTTTHIVEIV DDEGRICAIGRMTCQVI >gi|302034473|gb|GL383162.1| GENE 535 539017 - 539664 677 215 aa, chain - ## HITS:1 COG:MT1662 KEGG:ns NR:ns ## COG: MT1662 COG3707 # Protein_GI_number: 15841081 # Func_class: T Signal transduction mechanisms # Function: Response regulator with putative antiterminator output domain # Organism: Mycobacterium tuberculosis CDC1551 # 12 209 4 200 208 205 59.0 4e-53 MQGITVSKPQDLTRSTSDSGAEAEHPRVVVAEDEALIRLDLVELLEEHGYEIVGQASDGE EAVRLANELEPDLIVMDVKMPKMDGITAADKIAEDRICAVVMLTAFSQRDLIKRAKEAGA MAYVVKPFDASDVIPAIEIAMARFAEIRGVEDEVMDLEERLESRKIVDQAKGILQTSLDL TEPEAFRWIQKTAMDLRKSMREVAQGVIDHAESEK >gi|302034473|gb|GL383162.1| GENE 536 539918 - 540283 306 121 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3839 NR:ns ## KEGG: HMPREF0675_3839 # Name: not_defined # Def: putative CrcB protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 121 3 123 123 191 100.0 6e-48 MLWVCLAGGLGAVARFLLDSRINSRFSVPVPLGTLVINVMGSLLLGLITAAALNHLGFSQ NLKEPLGTGFCGGFTTFSTASVETARAAYGCGRRVGALHCMGMAIAGVLAAILGLALGSR V >gi|302034473|gb|GL383162.1| GENE 537 540286 - 540717 182 143 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148985194|ref|ZP_01818433.1| 50S ribosomal protein L19 [Streptococcus pneumoniae SP3-BS71] # 18 128 11 117 124 74 39 8e-12 MAMRSGFLDRRPVLVGLVFLGGCLGTLIRSVIAHAWPSRADGVPWGTLAINLVGAFVLAT LLELLVHAGPDRGVRRAVRLCIGTGLLGGFTTYSALTVEAGQRVMSGQWLWGIAYLLTSV AAGALLAWVVIAAVRCVMGKRSS >gi|302034473|gb|GL383162.1| GENE 538 540999 - 542375 1632 458 aa, chain - ## HITS:1 COG:Cgl2036 KEGG:ns NR:ns ## COG: Cgl2036 COG0469 # Protein_GI_number: 19553286 # Func_class: G Carbohydrate transport and metabolism # Function: Pyruvate kinase # Organism: Corynebacterium glutamicum # 4 457 26 471 477 421 51.0 1e-117 MKELMEAGMNIARLNMSHGDYSEHQERLDLVRSVSKELGLNVAALADLQGPKIRTGLFEK AEGESNGKIDLKIGGKFTITTDDIVGNQERVSTTFKGLPQDCKPGDVILIDDGKTVLQVD SVSGNDVNCHCTVAGPVGDHKGINLPGVAVSIPALTKKDEENLRWALKAGIDLVALSFVR HGSDIDRVHEIMDEEGRTVPVIAKLEKPQAIENLDEIIDVFDAVMVARGDMAVECPLEEV PLIQKQIIEKARLQAKPVIVATQMLESMIHAPRPTRAEAADVANAILDGADGVMTSAETS VGDFPGETVRTMAKIVESTEARGLDKIAKIDWDPHTTSGIMSKAAAEIAERAEAKFIVAF TKSGDTARRIARLRPSTPLIVFTSDETTTKTLAWVWGAHAVVTPVFKNAEELYRWVNAYL RDKGFVPVGDRVVVLSGSPMDIPGKTNNLRILRIKEDD >gi|302034473|gb|GL383162.1| GENE 539 542550 - 543470 439 306 aa, chain - ## HITS:1 COG:Cgl2087 KEGG:ns NR:ns ## COG: Cgl2087 COG0564 # Protein_GI_number: 19553337 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthases, 23S RNA-specific # Organism: Corynebacterium glutamicum # 4 305 9 309 310 362 60.0 1e-100 MSVLLVPDGLDGERVDVAAARMSGVSRSRISSLIEDGGVFLDGQQVSRASVRVATGQMLD VDLCDPVATPSITPQIVEGMRIIHDDSDIVVVDKPAGVAAHPSLGWEGPSVVEHLAAAGF AISTSGAPERQGIVQRLDVGTSGLMVVAKSEHAYTLLKQAFRDRTVDKVYLALVQGHPDP FTGTIDAPIGRDHRHDWKMAIVDGGRHSVTHYETVEAFRHATLLKVHLETGRTHQIRVHM AAIKHPCCGDPLYGCDPALAKELGLERQWLHAGELSFTHPGSGEWVTFHADLPADLQNAL DVVRQA >gi|302034473|gb|GL383162.1| GENE 540 543512 - 544009 278 165 aa, chain - ## HITS:1 COG:MT1591 KEGG:ns NR:ns ## COG: MT1591 COG0597 # Protein_GI_number: 15841006 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Lipoprotein signal peptidase # Organism: Mycobacterium tuberculosis CDC1551 # 13 165 35 186 202 108 42.0 4e-24 MLVGGQLKRWRVVMVAIGVLGYGLDQWTKAEAVARLDPYDPPSWFGGFLTLRLIRNPGAA FSMGSTATVLISLFAIAMLIAVCVWGVPRARHRWSLIACGMLIAGVCGNLTDRIFRAPGP LRGHVVDFMSLPHFAVFNVADIFITSTAILVVVVAVFGHHEDDAG >gi|302034473|gb|GL383162.1| GENE 541 544024 - 544446 371 140 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3834 NR:ns ## KEGG: HMPREF0675_3834 # Name: not_defined # Def: C4-type zinc finger protein, DksA/TraR family # Organism: P.acnes_SK137 # Pathway: not_defined # 1 140 1 140 140 256 100.0 2e-67 MSDHDVEAIAASLPVRDGDEPWTADEISEIVGTLESDVQRMGTALAKAENDLADLMKQGN DGAGMDTIDVGSSQFERDQEISVTRNARAVYDQSKLALQLLDGGTWGTCESCGEPIGKAR LQAFPRATMCVKCKQRQERR >gi|302034473|gb|GL383162.1| GENE 542 544667 - 545752 943 361 aa, chain - ## HITS:1 COG:no KEGG:PPA0765 NR:ns ## KEGG: PPA0765 # Name: not_defined # Def: putative immunogenic protein antigen 84 # Organism: P.acnes # Pathway: not_defined # 1 361 1 361 361 491 100.0 1e-137 MTLTLEEVRKVRFPMVKRPGEGYRAIEVDDFVDKVEAAFMTLTDENERLKAQVEALRSGE PGEQRPDQDLLNENEHLRAQVEELRSQQNGRSVNSGEVDRAKAAQQDAEKRARQLEQERV SLQSQIEELRQAARRPGQDIDPAEVARLRSENERLGAQLRDAQSLAARSRTSSVAQQPAT TDDGVRKLVVTTSAEASPAVVRMVELALADAERVVHEAESEAGRKVQAAETKAHELTVDA QTRAERIESSARVNAEKLTSDAKSNADRVNADAQTRRTELFRELEAERDNLAGRVDHLRS FEASYREALTSHLRAQADNLDQGVFEPAELPELLKSENRVAPGGSSTPRLDALIGRGQQQ N >gi|302034473|gb|GL383162.1| GENE 543 545905 - 546195 342 96 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3832 NR:ns ## KEGG: HMPREF0675_3832 # Name: not_defined # Def: YGGT family protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 96 1 96 96 123 100.0 2e-27 MILTGTILTWIIEIYTVLLIVRMLMSWVPLLIRGFEPRGVLAVVFEAVYTVTDPPIKFFD RLVPPVGFGNVGFSVGFIIVFVLLAILQRVVIVIFW >gi|302034473|gb|GL383162.1| GENE 544 546206 - 546724 578 172 aa, chain - ## HITS:1 COG:ML0920 KEGG:ns NR:ns ## COG: ML0920 COG1799 # Protein_GI_number: 15827440 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mycobacterium leprae # 60 169 99 207 210 117 53.0 8e-27 MAGIGRKIASYVGIVDDRRYDEEDLPDEELTTEVYSDDGYEPSSEVTQLHHHDSNEQHGR GHKAVQHRRRSELEEPSIADINRILTVHPRNYNEARTIGEQFREGIPVIMNLTEMDDADA KRLVDFAAGLIFGLRGTIERVTSKVFLLCPRNVNVTPEDKARIASGGFFNQS >gi|302034473|gb|GL383162.1| GENE 545 546851 - 547636 430 261 aa, chain - ## HITS:1 COG:Cgl2104 KEGG:ns NR:ns ## COG: Cgl2104 COG1496 # Protein_GI_number: 19553354 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 6 260 4 246 246 132 37.0 8e-31 MLRFVIDPGANHGVGVAFTDRVDASGQGRGGAGFEGFNLGRADEDPTVLEHVDSLRSRLG LGPVMVCHQVHGNEVWRVRPDDVEGWIPQRYLGNRVEGQPKLPIADAMVTDLPGVALAIR VADCMPIMLADPKAGVVGAAHAGRVGFLAGVLPATVKIMCDMGATELLAWLGPHICGRCY EVPAEMAEQVWAKYPATRAVTRQGAPALDLGAGALAQLESLGVAAVGLDPCTFEGDDFFS HRRDHGAGRLAGLVWNAHDAH >gi|302034473|gb|GL383162.1| GENE 546 547638 - 548891 865 417 aa, chain - ## HITS:1 COG:MT2209 KEGG:ns NR:ns ## COG: MT2209 COG0206 # Protein_GI_number: 15841642 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division GTPase # Organism: Mycobacterium tuberculosis CDC1551 # 4 314 25 335 401 381 75.0 1e-105 MAIPSQNYLAVIKVVGVGGGGCNAVNRMIEAGLKGVEFLAVNTDAQALLTSDADVKLDIG RDLTRGLGAGADPDKGRQAAEDHADEIEESLKGADMVFVTAGEGGGTGTGAAPVVAKIAR SLGALTIGVVTRPFSFEGHRRSSQAEQGIDNLRDEVDTLIVIPNDKLLDMTDQQIAILDA FKQADQVLMQGVSGITDLITTPGQINLDFADVKSVMSNAGSALMGIGRASGEDRARAAAE MAISSPLLEVSIDGARGVLLSIAGGSDLGLFEVASAANLIEAAAHDEANIIFGTIIDDAL GDEVRVTVIAAGFENGQLTSTKQPGISQRPASRPAMTNRSSAGVFGAGTGSAASTSAGSS SSASRQPADNQRPTPIRPQTQGSPFGKAQSQQQSHPVEPVNPPEEPDDDLDVPDFLK >gi|302034473|gb|GL383162.1| GENE 547 549014 - 549727 239 237 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|88856514|ref|ZP_01131171.1| 50S ribosomal protein L6 [marine actinobacterium PHSC20C1] # 11 233 30 260 266 96 29 2e-18 MPVSDISVAMELRRRRRRKRNRIIAGVVAAVVVLVLVAMWIVRSSSLLCVNTIEVHGTRL VTASQVEQVAKIPKGQPLARVNTDDVAARETRMDIVQQAEVYRKWPHTVVIDITELKISY QVKTLGGYLWIDPSGRIFNRTAKPTPNVVWATTSSGNRGLLRDVATVADSFPTELRRHVD HIEATSRDAIVVVLSGKRTVVWGSADQSVLKAKVTTAMLHVKATRYDVSSPEHPTSR >gi|302034473|gb|GL383162.1| GENE 548 549727 - 551142 1248 471 aa, chain - ## HITS:1 COG:AGc3796 KEGG:ns NR:ns ## COG: AGc3796 COG0773 # Protein_GI_number: 15889377 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate-alanine ligase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 12 457 4 453 471 304 42.0 3e-82 MSLREPVELLDPSAVGPVYFIAIGGAGMSGVARIYHDLGVEVRGSDQVDSANLRDLASLG VQTWVGHDPSHLAGARTVVVSSAIRPDNPELVEAHRLGLRIWHRSAALAALMLGREGVSI AGTHGKTTTTGMVATMLDCAGADPSYVIGSPLAATGMSSHLGGGEAFVVEADESDGSFLQ YPSQIVVVTNVEADHLDNWGTPQAYFDGFVSMATRPEVRYVVTNADDPGAAELACRLEST GTVRVVTYGESEQAEVRLVDLDLNGTTASATLVHGPTQGRLELQVPGRYNLSNAAAAYCV GSLLGISHQDLLTGIASFTGTLRRFQLVGRVADVSVFDDYAHHPTELRATLGAARRVVTG QGRVIACFQPHLFSRTRDFAGEFGSALTLADRVIVSDIYPAREDPIPGVTGELVHDAVIA AGGDSRYVPDKQDLPEALAEEVRPGDLVITLGAGDVTLVGPVLVGLLEGKA >gi|302034473|gb|GL383162.1| GENE 549 551154 - 552272 600 372 aa, chain - ## HITS:1 COG:Cgl2108 KEGG:ns NR:ns ## COG: Cgl2108 COG0707 # Protein_GI_number: 19553358 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase # Organism: Corynebacterium glutamicum # 2 331 8 324 363 228 43.0 1e-59 MVNVVLAGGGTAGHTSPLIATAMALQERGATVSCIGTPRGLEGRVIPEAGLQLDMIPPVP LPRTVNADLFKVPARLAGAVRKAGEVLQRRQTDVVVGFGGYVSLPAYLAARRAKIPVVIH EQNAVPGLANKIAARFAVFVGTAFPDTPLPKARFVGMPLRSQITDLADASGQARAERCAR ARADLGLDINRPTLLVSGGSQGAVAINEAVVAARTRLLADGVQILHVLGPKNIRGATRIT DELTGASWLPMGYVDDMASAYAAADLMVARSGAGTVVETATVGLPTIYVPLPHGNGEQAR NATSAVDAGAGVVVANADLDVERLLAETARIHDADVLAQMSAAGRGLMPAHAAEEMAVRV ISAATSIDPTIG >gi|302034473|gb|GL383162.1| GENE 550 552315 - 553637 745 440 aa, chain - ## HITS:1 COG:ML0913 KEGG:ns NR:ns ## COG: ML0913 COG0772 # Protein_GI_number: 15827433 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Mycobacterium leprae # 51 415 64 429 534 187 36.0 4e-47 MLLNTLTGQMPMAEKSVDSRVRRTTRRRTPGSWLRHLLRLDGGDGSSRRLLAQPFLDYYV ILATTVLLCGIGALMGLSSSSVYSQSLGHGPYHFAIRQILFLVVGAIAAAVVSRLSETHL RQLGGFAYAVVCLMLVLVLTFLGSDAGKGNQSWLSLGPVSLQPSEFAKFALVLLGASYMS SRRGEMATPKGVGGYLGLYGVVGLLVVAQGDLGTTMIIGLIMLAQMWNFGVPKRYLGALI GLGLLAVLLLTAITPYRAERVLSFLHPDNGASTSQQPLSAIYALATGGWWGVGIGASRQK WGGLYDGAQNDFVFAVLGEEMGLLGTLGVILLFTLLIWAGVRTAMRQDSLFRRSAASTAT AWIAAQALINMSVSLNLLPVVGVPLPFISIGGSALVSALLAVGLLLACARTEPDARRSTA ASQRTEPARVTSVVDGGNRG >gi|302034473|gb|GL383162.1| GENE 551 553597 - 555093 1052 498 aa, chain - ## HITS:1 COG:Cgl2110 KEGG:ns NR:ns ## COG: Cgl2110 COG0771 # Protein_GI_number: 19553360 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramoylalanine-D-glutamate ligase # Organism: Corynebacterium glutamicum # 28 486 15 458 472 245 38.0 1e-64 MGGRAVTFSGKVDLSAADRLFDWSGVHVVIAGLGTSGYAAADALLELDATVLVLDDSDDD SHRDKGGLLEVLGAEVRLGPGSASDLPEETDLVVVSPSWRPTQPLVARALTRGIPVWGEP ELAWRLMHPDRVIPWLAITGTNGKTTTTQMTESILHAAGLKACAVGNIGRPILEAMADEI NYDVFAVELSSFQLHWSNSLSLHSAAVLNLHQDHLEWYAHESDPLGSYAADKARIYHQVT NSCVYNVADPATEHMVEDADVVEGARAIGFTTGTPGPSMIGIVDGLIVDRAFVEQRATSA MKLARLEDVHPFAPHNVENALAAAALTRSFGVPAPAVGQGLRDLHLGGHRIETVHQAGGI TWVDDSKATNPHAANSSMRAFEHIVWIAGGQAKGTHFDNLVTTHAGKLRGVVVLGTDRGI IARSLAEHAPQVPVVVIDDMSREAMARAVHEAAKMARPGDTVLMAPGCASLDIWPGYAAR GEDFANAAQHVDGPDADG >gi|302034473|gb|GL383162.1| GENE 552 555075 - 556145 934 356 aa, chain - ## HITS:1 COG:ML0911 KEGG:ns NR:ns ## COG: ML0911 COG0472 # Protein_GI_number: 15827431 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase # Organism: Mycobacterium leprae # 1 354 1 355 359 303 47.0 3e-82 MKNILLAGAVSMIGTLVGTRWFIHWLAAKGYGQFIRDDGPTTHKTKKGTPTMGGAVIIVS VLLAYLVAHLVTWTHPSISALLVLWLFSGLGFIGFLDDWTKISKQRSLGLKPKGKLLGQA FVAITFAIGVMYFPDVHGVTPGSPAISFLRDISWLYLPVWLGIVWVILLISGSSNAVNLT DGLDGLATGASTMVFGAYTVLSIWQFNQWCSRPTTAGNHCYAVRDPHDIAVVAIAIAGAC FGFLWWNAKPAQIFLGDTGSLALGGAVAGMAVVSRTELLLVIIGALFVIETVSVMLQVSV FKITGGKRVFKMAPLHHHFELKGWAEVTVVIRFWIICGLAVSAGLGIFYAEWVAGQ >gi|302034473|gb|GL383162.1| GENE 553 556142 - 557599 825 485 aa, chain - ## HITS:1 COG:Cgl2112 KEGG:ns NR:ns ## COG: Cgl2112 COG0770 # Protein_GI_number: 19553362 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide synthase # Organism: Corynebacterium glutamicum # 24 474 27 486 514 275 44.0 1e-73 MRVLDVATLAQWVEAAPVNDSAQVGPDVVIDTRKVTPGALFIALPGTRVDGHDFTQAAQD TGAAAVLVTRRTDAQLPHLVVDDGQAGLSRLARHVVATERERGMRTIALTGSSGKTSTKD MLAQILETFGPTVAPVGSFNNEIGVPLTACRSNENTSFLVSEMGTRGLGHISWLTSIVTP DVAMVLNVGNAHLGEFGSREVIAQAKGEIVEALSVDGWAVLNAADTLVAGMAPRTRGHIA WFSPDADHRRPDADIEVWAESTHADDLDRHSFTLAARRGESTWRSPVRLMTMGAHQVANA VAATAAALAALAMNDDIDDQTVTRIAEALSNAVSRSAMRMQLRERADGLVLVEDCYNANP DSMAASLTAMGHVLATRRVRDPQTRGVAVLGDMLELGQDSARLNAESGRLAAHAGFDVII AVGDEAENIAEGARAEGARVIVSTVEGASGSLGWTSHDVVLLKASRGLALERVGREVFEE REAQA >gi|302034473|gb|GL383162.1| GENE 554 557596 - 559185 1015 529 aa, chain - ## HITS:1 COG:Cgl2113 KEGG:ns NR:ns ## COG: Cgl2113 COG0769 # Protein_GI_number: 19553363 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl tripeptide synthase # Organism: Corynebacterium glutamicum # 45 514 32 504 521 341 49.0 2e-93 MSPESTVTPTPPAGAALRPSQGDPVGWTDLVASFDSCRANDNGPAITGITLDSRQVRPGD LYVGLHGLHAHGASFAASAVESGAVAVLTDEDGATLAAEAGVPIIVVDDPRAAMAVAAAK IFGRPSDAMTMFGITGTNGKTTTAFLVEAGLRAAGHHVGTIGTIGFRLDGEELPSARTTV TTPESPDLQGLFAAMAERGASDVVIEVSSHALALQRVDGTCFDVVAFTNLGRDHLDFHNT LDNYFNAKARLFTPDLARVGVINVDDPRGRQLVERMQANGVKAVTTSIHQPSDYQVTSWQ AARAGAIFDVSTPSGERTLELSLPGEFNVRNAAMALAMLEAAGLAFDDVADGLCSAQVPG RMERVDLADDAPTALVDFAHTPQAIASALDAARSSVDGGRLIAVLGAGGDRDVAKRGPMG QIAAERADIVIVTDDNPRTEDPAVIRAAVLEGAHEAAGDGVIVIDGGRRREAINEALRMA EAGDVICVLGKGHETGQNIGSEVLPFDDREVIRAEWKIMARQSEEDQAR >gi|302034473|gb|GL383162.1| GENE 555 559182 - 560969 1238 595 aa, chain - ## HITS:1 COG:CAC0329 KEGG:ns NR:ns ## COG: CAC0329 COG0768 # Protein_GI_number: 15893621 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Clostridium acetobutylicum # 7 569 15 583 605 237 29.0 4e-62 MASQRGRLTIVMAVFLVLAVSLASRALQLQAIEAPAYAASAAARMKYTYALQPNRGELTD RNGIVMAQTQPAVLVFVDPRMISRNGVDERVTMTREQQEKAAAAPKAVAKILATRLGGQP EDYRKAVTATDAKGKLSRYSVVRHHVDSYTFDLIKKDMKQGGWYGVFSSNDPIRTYPSGQ VASNVVGFVNAEGKGAGGFEYSHNKQLAGVPGKESYEASTWGRIPLGSNTLVPAVDGTSY TLTLDAQLQLMAQQALGTAIKNAKAKSGEIVMMDVTNGEVLAMASMPTFDSNKPGKAKEN QTRNRVIQDAYEPGSVQKVLTMAALTDQGIITPDSHVVVPRALSSGGGKITDAEPHGTEY LTARGVLVHSSNIGTALFARKLDKATMVSYLKVFGLGAPTRIGLPGEASGQIPKPTMPDY TRDQVAFGQGLSVTALQEAAAVAGIVNGGVYHSPTIIKSAVDGHGEPSEIPKTTTRRVIS QRASEEVRDMMENVVSTAKGRPIPDYRMGAKTGTAQRIDPECHCYHGYISSFIAVAPIEK PRILTYVVINQPTNGHTGTAVAQPAARQLMSVALPRYGVQPSTDKARKEPLEYQP >gi|302034473|gb|GL383162.1| GENE 556 561104 - 561568 494 154 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3819 NR:ns ## KEGG: HMPREF0675_3819 # Name: not_defined # Def: putative cell division protein FtsL # Organism: P.acnes_SK137 # Pathway: not_defined # 1 154 1 154 154 246 100.0 2e-64 MSAELAPRPQQARTAAARPTSLRPVLRALPQRVRQQQMGRLGFAILIVVMLAAGLAGLLV LNTTIQAQSMQIAQETRNLNVLQHQQAVLAAEVDHLRGPQNLQEQAKKLGMRPNPYGSYI DLRTGKVIGTQTKVDGKEVPGVIGETAKPEVGQP >gi|302034473|gb|GL383162.1| GENE 557 561565 - 562572 862 335 aa, chain - ## HITS:1 COG:ML0906 KEGG:ns NR:ns ## COG: ML0906 COG0275 # Protein_GI_number: 15827426 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis # Organism: Mycobacterium leprae # 12 332 42 368 372 267 49.0 2e-71 MATDAIGSDAVHIPVMRARILDLLAVVLKSGRRVHVDGTLGMGGHAEAVLRRFPDVELVG IDRDQQALTMAEARLEPFADRVHLVHAVHDELPEVLDDLGLDYVDSVLLDLGLSSFQIDE VERGFSYSVDSPLDMRMDQSSGRTAAQILNESDPGALVRMLREYGEEKFADRIVRAIVTE RDRQPIETSGRLVEIITEAIPATVRRKRHSHPAKRTFQALRIAVNREMETLPAVLPRALD RLDVGGRIAVLSYHSLEDRPVKEAFRDACADTAPAGLPMVPESMAAKFNPVTRGAERPDA DEVATNPRSASARLRVIERVRSGPVNRQHATKESR >gi|302034473|gb|GL383162.1| GENE 558 562721 - 563149 454 142 aa, chain - ## HITS:1 COG:ML0905 KEGG:ns NR:ns ## COG: ML0905 COG2001 # Protein_GI_number: 15827425 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mycobacterium leprae # 1 141 1 141 143 139 47.0 1e-33 MFLGTHTPKLDEKGRFFLPAKFRDELDDGLVITRGQDRCLAIYPTETFVEMTREIAKGSV SVKKVRDYQRMLAAGASDTAPDKQGRVMIPPMLRRYAALNKEIVVVGAITRVEVWDATEW EKYSEAQEEAFADMNEEVFAEQ >gi|302034473|gb|GL383162.1| GENE 559 563425 - 564468 530 347 aa, chain + ## HITS:1 COG:BH0604 KEGG:ns NR:ns ## COG: BH0604 COG0714 # Protein_GI_number: 15613167 # Func_class: R General function prediction only # Function: MoxR-like ATPases # Organism: Bacillus halodurans # 41 340 15 310 318 274 46.0 2e-73 MNHRESQPVIPAHAQPLETVDPRAASIDGVVAITNAVRSAVAGAIEGKSERIDTALVVLL AQGHLLVEDVPGVGKTTLARALGRAIDCTVHRIQFTPDLLPSDITGVSVYDQEKREFVFK PGGIFANIVVGDEINRASPKTQSALLEAMGERQVSADGLTHPLEAPFMVMATQNPIEMEG TYRLPEAQRDRFMARITMGYPTRSAELAMLEHHGATSPLDEVRPVTDTQTIRRLISTVLG VHVAVDIHEYVLDIIGATRSHESIRLGASPRAALHLVRACRARAAMSGRDYVIPDDVQAL AAPILAHRLVFSGRSGIASHESARAAESVIGSILRQVPLPERAHQDR >gi|302034473|gb|GL383162.1| GENE 560 564690 - 565691 576 333 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3815 NR:ns ## KEGG: HMPREF0675_3815 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 333 76 408 408 620 100.0 1e-176 MRIALGSQACETVTVERRGGLPLGAARFTDTIPAPLGQSRWSTATIQTPVIPTTRGRFVI GPVMMRTVDPFGMARHHTDLGQVAEVIVTPRIVDLGASGELGGQGFDTRSSAIHAGRRGP DDAMVRDWHTGDSVRRIHWRSTAHRGDLMVRCEEQAWNPSVVIVLDSRARRHVGTGPDAS FEWAVNAVASISTRLASDGYVTHVCDSSGTLKGDILDALVDEPLRPDTALTKAIESCQGI DGPAIAILGRLETTDIDPLVDLRRDRVAGLALVLDSDTFTARRFRSPLEQAEEHERAVAE LDDAGWAVVPVDSRTSIDSAWQNLLQTARTAAL >gi|302034473|gb|GL383162.1| GENE 561 565649 - 567901 880 750 aa, chain + ## HITS:1 COG:lin0469 KEGG:ns NR:ns ## COG: lin0469 COG1305 # Protein_GI_number: 16799545 # Func_class: E Amino acid transport and metabolism # Function: Transglutaminase-like enzymes, putative cysteine proteases # Organism: Listeria innocua # 295 606 264 578 721 118 29.0 4e-26 MAELAADRKDGSFMTNPRRAAQPVTQLSEHLDLTKASEYPGLLAIHLAVALAMMLATFSL IGLTTDPSFWIGPTAVIVFLEVVGLLCRHHHWDHAEVQGVQAILVVVIVVMMGGISASAV GSSGSFPVNALHLYRDTLTLIQTTDGHLPPSIGVIWLTTTVVAVLTVLADLLTITLESPG WSLAPLLVIHLAAVLIVRHDTPWWSFALVAASWLIILTVDHALRGGGPLTWLAAAIFSII AITIATVFAAIAPVWGHLDFSHPAAAPSSPVRMSDPTIELRRNLHNTSTASVITYTTNSP DGEYLRMTSLSKVTDRGWGLIPVDLEHSAPESVPGLFGPSRTRTVDINITGFSSQYLPAP YGPIAADVDQTWAWDPQDLTIVSTSADHDHATSDMQYSISAQEPDPDPVTFDNAKAGTPN NSVYTEVPANVPSSIRDLTSRIIKGKSTPVTKAIAIQNWLRDSARFHYDINAPEGDGYQV LENFLLRTHRGYCIHFAASMALMARLEGIPSRVSVGFLPGDHARDTWKIRANQMHAWPEL YFQDYGWVRFEPTAAVAPAPTWTDKETTIPSPSSTPSSSPTPSTQTSTPSPEPSPAAAPT STPTSSPAPISTADHEGFNWAPLSAVLVILVILALPMLIRMLISRRRITRGSIAGIWREI RDLWIDHGLAWPDGTPRRQAAALVTDMDPDTSAAVKKLALAEEMDRWSSKDGHDNSLPDD LGAVKAWLARTPTPRPHWLATWLPTSLVKK >gi|302034473|gb|GL383162.1| GENE 562 567928 - 568356 187 142 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3813 NR:ns ## KEGG: HMPREF0675_3813 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 142 1 142 142 181 100.0 1e-44 MPLSAEEQRRLAELEEALSTDDLDFARSFSRRASATCPHPSRNALEQRRMQHRRARRRQI LLGSVMVLLGLAGVVGGVVLTSGVLAVVGFAIMALAVGVLLSTGGGVMPRSSGVRPRGGQ REPHSESFTARMEERWRRRQSR >gi|302034473|gb|GL383162.1| GENE 563 568564 - 569598 949 344 aa, chain + ## HITS:1 COG:BS_yqhI KEGG:ns NR:ns ## COG: BS_yqhI COG0404 # Protein_GI_number: 16079513 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system T protein (aminomethyltransferase) # Organism: Bacillus subtilis # 1 343 26 362 362 264 43.0 2e-70 MPVRYSSDLAEHHAVRKNAGIFDLSHMGEIRISGPDSGAALDYALAGKLSAVAEGRAKYS LLLTDEGGVVDDLVTYHLPDGDYLVVANAANAETDLAEFTKRCARFDVTVTDESAQTALV AVQGPKAVTIVLAALQKANTTLDSDEVRDVKYYRCLTGELDGFPVLVARTGYTGEDGYEL YVPAEAAEHLWQLLMDAGGEDLTPCGLACRDTLRLEAGMPLYGHELGTDIHPSQAGLGRV VNFKKEGDFVGRCALENRDTTTDRMLVGLAGEGRRAGRAGYAVVNEGKTVGAITSGILSP TLGHPIAMAFVDPDVAKTGTSLSVDVRGKALNTTVVELPFYKRS >gi|302034473|gb|GL383162.1| GENE 564 569639 - 570010 485 123 aa, chain + ## HITS:1 COG:ML2077 KEGG:ns NR:ns ## COG: ML2077 COG0509 # Protein_GI_number: 15828123 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system H protein (lipoate-binding) # Organism: Mycobacterium leprae # 4 108 6 111 132 115 59.0 1e-26 MELSELKYSAEHEWVAVDGDTVTVGITDYAAEALGDVVFVDVPEVGSDVSAGSAIGEVES TKSVSDLFSPVTGTVSEVNEAITESPELVNSDPFGQGWLFKVSGGQLGDDLMDRNAYLKL TAE >gi|302034473|gb|GL383162.1| GENE 565 570016 - 573000 2341 994 aa, chain + ## HITS:1 COG:Rv1832_2 KEGG:ns NR:ns ## COG: Rv1832_2 COG1003 # Protein_GI_number: 15608969 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain # Organism: Mycobacterium tuberculosis H37Rv # 477 992 1 488 489 639 63.0 0 MTDHAENRCGLEGPHPFSSRHVGSVEDDLRYIAETIGVTSPEQIIRDAIPASVLDSNEGE SSVRTPSFPPAAAETTARAELVEIASGNRVTRALIGRGYYGTLTPSVIRRNILENPSWYT AYTPYQPEISQGRLEMLTIYQQLITDLTRLALANSSLLDEATAASEGMLLARRAARKVKF NRFLVHTHLFDQVRDVVLGHAEATGIEVVEADLRDPQSWRPEVEAGCFGVLAPYPDSTGA LWNPSEVFDAVHKVGGITIAECDLLSLTLLAPPGELGADVAVGSSQRFGVPMGDGGPHAA YMSVRSGLERQIPGRLVGVSTDADGNPAYRLALQTREQHIRRDKATSNICTAQVLLAVVA AAYAVWHGPTGLTRIARQVTDRAHQLASALRAAGLDVADQQFFDTIRIRTKGGAKELWNR AREGGYTLDLVDGDILQISVDETVTDDELRELTQLLGGNTDEIRGPADGAWPEDLRRTSS FMTHPVFSSYHTETTMMRYLKRLADRDYGLDRGMIPLGSCTMKLNAAAEMEAMTWPAFSQ MHPFAPVEDQAGSLRLIRDLEIWLAELTGYDTVSLQPNAGSQGEYTGLAAIRGYHVSRGD TERNVCLVPASAHGTNAASAASAGLKVVVVKSHDDGTIDRDDLAAKIAANEGRIAAIMIT YPSTHGVYEDGVRQVCDMVHEAGGQVYIDGANFNALVGWGQFARIGGDVSHLNLHKTFAI PHGGGGPGVGPVAAKAHLAPFLPGHPLNPRNEHPLNGGGTVTHNGHAVSAAPFGSVSVLP ISWAYLRLMGLKGLQFATEVAVLNANYIAHRLHDKIPILYTGQNGYVAHECILDLRPLTA ETGITVDDVAKRLIDYGFHAPTMSFPVAGTLMVEPTESEDLAELDRFCDAMLAIVEEARM VQSGHWPADDNPLINAPHPAARLVADEWNHPYSRELGCYPGMRLGIQRDQERGLDVNTVT RIQAKYWPPVGRVDNTYGDRHLVCSCPPPEAFED >gi|302034473|gb|GL383162.1| GENE 566 573065 - 573784 487 239 aa, chain - ## HITS:1 COG:Cgl2475 KEGG:ns NR:ns ## COG: Cgl2475 COG2186 # Protein_GI_number: 19553725 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Corynebacterium glutamicum # 6 218 23 239 250 102 31.0 7e-22 MSQEFLASSVASRLGARIVDGDLQAGDVLRLGDIEQESAASRSVCREAVKILESLNLVRS RRHVGVTVLPSNQWDVLSPKVVHWHMSGNKREQEMSWTNELRIALEPTAARLAAERADGT DLKGLQDAVSGMTEAIRNDDSTSFAKHEHAFHRSLLAATRNPLYIAHVPMLLGYFAEQYD DRNLTSEDGADLVQHRDILDAITMSDPDAAEQSTRALVLGLGRVLPQPTVVSGPAGVAH >gi|302034473|gb|GL383162.1| GENE 567 573955 - 574194 289 79 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3808 NR:ns ## KEGG: HMPREF0675_3808 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 79 8 86 86 95 100.0 5e-19 MLQASHNPLVASPVRIVAAVLEGRVRLMPFEPKQEAIGFHRSMADAVAAHDAKAAAAAMR QIVTEAHQAMSSSMFAASK >gi|302034473|gb|GL383162.1| GENE 568 574428 - 575069 696 213 aa, chain + ## HITS:1 COG:PA2322 KEGG:ns NR:ns ## COG: PA2322 COG2610 # Protein_GI_number: 15597518 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism # Function: H+/gluconate symporter and related permeases # Organism: Pseudomonas aeruginosa # 2 213 239 450 450 164 49.0 1e-40 MTVLLPVVLMMGKALADIFALKGTAVRSILDFLGEPMFALLLTTLLAIFTLGKVSGMNRD AMSDSVGAALPPIAGILLTVAAGGGFKQILVDTGIAKLLGNGITQSSISPLLMAWLVAVV IPLATGSATVATVTAAGILEPVAASLPSAHAALLVLAIGCGSVFFSHVNDAGFWLIKEYF GISVGQTIKSWSLMETALSVCGVLLVLLVSVIV >gi|302034473|gb|GL383162.1| GENE 569 575142 - 575600 563 152 aa, chain - ## HITS:1 COG:ML1795 KEGG:ns NR:ns ## COG: ML1795 COG0071 # Protein_GI_number: 15827955 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone (small heat shock protein) # Organism: Mycobacterium leprae # 6 132 6 132 148 110 50.0 8e-25 MARTFDPIREMDRLLSDVTRTPATVAVPMDLYREGDDYTVAVDLPGVDPASIDIDVDDRT LTIRAERAAKVAKEAQWLSRERAMGTFARQLTLGHGLATDRITAEYTDGVLTLTIPVAET AKPRKVEVRHGSTTIDAMTDQAQVGSGEHQEQ >gi|302034473|gb|GL383162.1| GENE 570 575721 - 576515 425 264 aa, chain - ## HITS:1 COG:mlr0493 KEGG:ns NR:ns ## COG: mlr0493 COG0596 # Protein_GI_number: 13470715 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Mesorhizobium loti # 30 250 44 265 268 67 27.0 2e-11 MDRSHRICASCNDPIEPTTDGIVPEVNTDLPVVAIHGITSSPTTWGGLVLAFNIEGVIVH QLSLLGHGPIGIRRGAGTDYPLEAFATDVIEQMDALKVDKCALVGHSLGALVSSMVAQRQ PDRVDRVLLEEMPVPRRVRQDPPPMRTYVDAIFMEVAAFAGRKRFDPKMVWKVSRELLKP HPQWWDGLSRMIMPVLVVGGGKASYLRQDRLSDVARALPDARIMTIDGGHRTHITKGDEF CDIAVPFLTNGKYANRRHNGIQDV >gi|302034473|gb|GL383162.1| GENE 571 576336 - 577667 523 443 aa, chain + ## HITS:1 COG:no KEGG:PPA0734 NR:ns ## KEGG: PPA0734 # Name: not_defined # Def: putative carotenoid dehydrogenase # Organism: P.acnes # Pathway: not_defined # 25 443 1 419 419 724 96.0 0 MDDDTFNIERQYEPAPGRWRAGDSMDGDNRKIRVHLWHDTVSRWFNRIVAGGTDTMGTVH IVGDELVALAAALRLAQMRHKVTIISSSPRWLESAERPLAPELGATLQIPSAWRDLFAKS GRAMEAELVGIGLNLVTEPDTQISSSMADISLPTDRGAQIHTVRDRYGHRIAHKWRDVLD HADTIWQARRQYGVEHAVTSRPEPLPEPLHVDLPSPLAELSADETRLAITRIFGCWNLVG RDGPTDLQPLLTLLNKRLTRRGVIVDPSPNDSPNAIIDTTAPAPRRSRWHRPARPWSSPI ITVSTSGEMPSNHGMAHRLDWKAEGLVETWSWWDGAQARRICHDYTRPIPNPELGTAWSA WRDRPPMVWRQEGPIPVLAASPASHGGPEPWARLLTGALAAYLTHERLTGEDIRPSNKAI GAAGRPRRSHSSTDRVSTRRLDR >gi|302034473|gb|GL383162.1| GENE 572 577714 - 579975 1422 753 aa, chain + ## HITS:1 COG:Cgl1339 KEGG:ns NR:ns ## COG: Cgl1339 COG3973 # Protein_GI_number: 19552589 # Func_class: R General function prediction only # Function: Superfamily I DNA and RNA helicases # Organism: Corynebacterium glutamicum # 5 719 8 754 755 248 31.0 3e-65 MTAHDSSTTDPRVVESEIAKEQAHVDRVRAQLEIAENKARMLAKAGQDMYRSDRTSWVRE EDGTAMFERDAFSYNAAKRLAVLDAEHEGLVFGRLDLTDDEVRHIGRIGVRDADYEPLVI DWRARAAEPFYRATPSDPMGVVRRRVLRCRDDKVLGIEDDLLDSTSQANLPIIGEGALMA SLSRARDTRMHSIVSTIQAEQDEAIRAPYQGVTTIMGGPGTGKTVVALHRAAFLLYSHRT RLENGGVLVIGPSSVFMSYIERVLPSLGEDSVTLRSIGQVPSDILHFSSDRLDEPRTANI KGSLEMVDVLTRLVNLPMSADPDSLQLRVTVKGEVLTLDASILATTRQRILKRNRYNDGR EAVEVSLRDQLWARVPADVLAAHDLTRDDFDELVSSQASWRMLLNAWWPALSASDALARL ADPAVAEAVTPYWNEETRQLLVSSIPTEADRRGRRNWSIADMALLDELAALLGPVPPEPD ADDPVFIEGGDAEELVTLGDRLHESRHIDEDEPRDTFAHVLVDEAQDISPMQWRMIGRRG RQASWTIVGDPAQSAFPHPNQTRAALDELVGNSPSRTFTLTKNYRSPAEVFDLAADVVVT VQPDADLPQAVRWVGVRPTVVRTDDLWAQVRLQLDEMLTSVDGTIGLVCPAGLVEQARRL VDDPRIITVTTMQAKGLEYDGAVVVDPERIVSETGNPAGGVRLLYVALTRPTQRLAVVGL RKQKSPHRSEANQPVRGAATPAWSEALWSHETC >gi|302034473|gb|GL383162.1| GENE 573 580029 - 580358 274 109 aa, chain - ## HITS:1 COG:AGc3850 KEGG:ns NR:ns ## COG: AGc3850 COG0685 # Protein_GI_number: 15889404 # Func_class: E Amino acid transport and metabolism # Function: 5,10-methylenetetrahydrofolate reductase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 3 93 58 149 312 71 40.0 5e-13 MAPDFISVAYGANGSRCDRALRCTQHMVSTGLRTVGHLTCVAQSVADVEQMVADYAESRI DHILAIRGDMLGGAGQPWVAHPWGLPNATELVRLVKWVHPEACIGREGA >gi|302034473|gb|GL383162.1| GENE 574 580576 - 581673 652 365 aa, chain + ## HITS:1 COG:Cgl2124 KEGG:ns NR:ns ## COG: Cgl2124 COG0142 # Protein_GI_number: 19553374 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Corynebacterium glutamicum # 1 363 1 364 366 231 40.0 1e-60 MYPFDPSSPVSADFRDSVSARILSFLDDEKRVIDAIGAELSPVLDAARDYTAGGKRLRPA FCYWGHAAAADQPIEPTGLLQAAASLEFLHVSALVHDDLMDHSDTRRGLPSVHRRFEAAH GIAHGDGPAEQFGCDIAILLGDLLLMWSSQMFTSAPVKADRLAAATPLLDAMRTEVTCGQ VLDVTSQSGMAGSDSESALDLVGRVVEYKCASYTVVRPCQIGVALAGGSDRLQQTMADFG SPIGRAFQYRDDLLGVFGDAELTGKPAGDDLREGKRTVLVAHALDRADSHDAARLKSLLG RPDLDDDDVATARRIIETSGAREAVESTIVQCHDHAVAVLDDAEMTDAGRIALRELARQC VERHF >gi|302034473|gb|GL383162.1| GENE 575 581698 - 582096 341 132 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3800 NR:ns ## KEGG: HMPREF0675_3800 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 132 1 132 132 251 100.0 6e-66 MTVDVQSGSGPEAGGPIGSGILLVDPAHSCDPIKVATAWREAGWRVMHMSGGADLGSVLA GFGHALSFPSWYGHNLDALRDCLADLGGDTAVLWTGWQPFERDNPQDWGRLVKAIGQRLD EDEVNGFALLLV >gi|302034473|gb|GL383162.1| GENE 576 582093 - 582536 229 147 aa, chain - ## HITS:1 COG:DR0453 KEGG:ns NR:ns ## COG: DR0453 COG4290 # Protein_GI_number: 15805480 # Func_class: F Nucleotide transport and metabolism # Function: Guanyl-specific ribonuclease Sa # Organism: Deinococcus radiodurans # 19 145 37 189 191 92 35.0 3e-19 MTVATWFRSHRWSVWIVTLLAAVVVGCSAPGNVAAAGSNATTAPMTVMATTQSSVGLVTI QENELPTQARQTLKLIDSGGPFPFSRDGIVYHNNSGALPHHKDGWYHEYTVATPGAQGRG PRRIVCGSDSTCFWTPDHYSTFKRIIR >gi|302034473|gb|GL383162.1| GENE 577 582663 - 584075 499 470 aa, chain + ## HITS:1 COG:MT2232 KEGG:ns NR:ns ## COG: MT2232 COG0515 # Protein_GI_number: 15841666 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Mycobacterium tuberculosis CDC1551 # 2 343 6 342 399 223 39.0 8e-58 MSTDPLVGHTLEGRYEIVSKIARGGMATVYRAQDLCLPRIVAVKVMHEGLDAELAERFDS EAKAAARLVNPHVVSVFDQGMDGDRPFIVMEYVPGCTLRHIITQEAPLTPVRALDLLEPV VSALASAHEDGLVHRDVKPENVLISDRGQIKVADFGLARAVGNHTMSATSGQLIGTVSYI PPERVTRGSSDERSDIYSAGVVLFEMLTGHKPHTGDSPIQVAWAHVNKDVPAPSQYLANG TKAEHDIAWLVPGYLDGLVRACTSRDPGKRPANGRALLDLLRRVRHALTTGRTDDPALAA LQNTVPQPNAVIANPVAHAPGGSTDRSARRRNEPVRPGTASVPPWSRTGTPVSPPTPVSI PDSPLSPIDCPPGRIPTQPANHSQPRPRPIHRRATQPASRSRLAQDAVHRRRRGVIAAVF IVLVAVLCAYLVFHFTSSRYSASELHSTNSVARTCVHGESSCMHTVSQNI >gi|302034473|gb|GL383162.1| GENE 578 584173 - 585081 944 302 aa, chain + ## HITS:1 COG:PAB2381 KEGG:ns NR:ns ## COG: PAB2381 COG0697 # Protein_GI_number: 14521649 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Pyrococcus abyssi # 1 267 14 272 280 99 30.0 6e-21 MAALWGSTLVVMKGIYAHMSPENLLACRFAMAAAAFGILFPKAWRANMRTIAKGVTLGVL FAAGQLLQAIGLGTTQAAMNGFITSLYVVFTPLLAAVIFRKKVSTAIWGAVALATVGMGV LALDPSTLGSGFGIGQLLTLASAVAYAGHIVATGRFANPSNVTSLGLYQTITVAIVCTIA ALPGGLSAPTHMEDWLALAYLAIICGTLTTFMQSWGQARVESTRAAVIMCTEPLWGAVFA IGLGGEPLTGRITIGGIAILAAMALVVRPPRRRRGAPQHHTEPPVVQVDPAWATRFGTDR ML >gi|302034473|gb|GL383162.1| GENE 579 585097 - 585744 452 215 aa, chain - ## HITS:1 COG:MT0810 KEGG:ns NR:ns ## COG: MT0810 COG2220 # Protein_GI_number: 15840201 # Func_class: R General function prediction only # Function: Predicted Zn-dependent hydrolases of the beta-lactamase fold # Organism: Mycobacterium tuberculosis CDC1551 # 1 204 1 204 212 137 38.0 2e-32 MRITHLGHSCILVEAAGQRILVDPGNLSKSWRGLTDLDAILVTHRHPDHVDPEHIGALVD ANSGAVVRAEEGACHEIPALDADPVAPGDVLQIGEVRIEAVGGHHAVIHRDLEPIGNVGY LIGEGLGTILYHPGDELDETPRGVDVLACPAHAPWAAMKETVDFARSVGARHGFLIHEGL LNERGWQLSFDRHQEMVSTTFHDLRDGQPWEVPQG >gi|302034473|gb|GL383162.1| GENE 580 585848 - 587242 1115 464 aa, chain - ## HITS:1 COG:PA2843 KEGG:ns NR:ns ## COG: PA2843 COG3200 # Protein_GI_number: 15598039 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Pseudomonas aeruginosa # 1 447 1 447 448 503 55.0 1e-142 MSQSVPSLEALNALPRVQQPSYPDPQATAEVVNQLRSLPPLVFAGECDDLRAYLAAVANR KAFLLQGGDCAETFAGVNADNIKSKLRVLLSMAVVMTYAGQLPVVKVGRIAGQYAKPRSK DTETRRGLTLPSYRGDAVNGFEFTPEAREHDPKRLIGVYNASAATLNLVRAFATGGFADL RGIHAWNADFVRNSNVEARYEALAAEIERALVFMMACGVEGDQLSTVDFYASHEALLIDY EHAMTRIDSRSQLPYDCSGHLLWIGERTRQIDGAHVEFLRHVRNPLGVKLGPTTTGEDAV AIADALDPDHEPGRLTFITRMGSKAVRTNLPRVIEAVEATGRKVVWSCDPMHGNTFETNN GYKTRSFADMCDEVNGFFDVHEELGTWPGGVHIELTGDDVTECLGGVDKLAESDLTNRYE TACDPRLNRNQSLELAFIIAERLADGRIKRDAVSPLARFRSIDL >gi|302034473|gb|GL383162.1| GENE 581 587340 - 588059 349 239 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3794 NR:ns ## KEGG: HMPREF0675_3794 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 239 1 239 239 353 100.0 3e-96 MKWLRRSHGEMTGHPLPAQPTIVAIHLHRPGDLAAAEHCLSGRVSKVYVMSGRRMERTQA HAEALRHLCEGSVVLMAPEGIRSWASQVHRLDVEVARLALDAEALVVPAQVVAGQLSLGT SVDMSRHAATPHSHAVLRAAADDVALALCKLTGLPYQDYPAVRADQRPHPIIWLFQMRKL RRDRRRHRRDAEERSREESARDAEELAREEENARLAAQLQARQASLADRLAERDIHPGR >gi|302034473|gb|GL383162.1| GENE 582 588064 - 588819 697 251 aa, chain - ## HITS:1 COG:ML0892 KEGG:ns NR:ns ## COG: ML0892 COG0204 # Protein_GI_number: 15827414 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Mycobacterium leprae # 1 221 1 221 244 177 44.0 1e-44 MWYEFFKYALFGPGVRALWHPRVVGKENIPTEGGVILACNHIAALDPIIVASMIDRKLTY PAKKELFAGDRGLWSKVVAWFLRAVEQVPLDRSGGRTSVNAMGSVERRLAEGGLVGIFPE GTRSSDGRLYKGKTGVARMTLGSGAPVVPVGISGTTVRRKVLGIPLLDHPTLIFGKPMHF DVLADRTEETAVLRWVTDEVMGAISDLTGQSYVDVYGFRVKHGNLKGKDVSKFVKPRPGG KPLPPPRVTKA >gi|302034473|gb|GL383162.1| GENE 583 588879 - 589286 238 135 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3792 NR:ns ## KEGG: HMPREF0675_3792 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 135 1 135 135 234 100.0 8e-61 MEHDGNDVDAAFEALIAREFGEVVTAPGRPRPNGLPAQRAPAHIPQEPPRDADEMDEPLP MEPAAPPSPTTKVGLVLVAICIVAVLLDMSGVNVPQTTLILAIASGGAGISLLIWRAITR ADRDDEGPWGNHSRL >gi|302034473|gb|GL383162.1| GENE 584 589291 - 590361 427 356 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 [Bacillus selenitireducens MLS10] # 5 315 7 317 323 169 34 3e-40 MLSVGIDIGGTKVAAGVVDESGQIVRRIQRLTPSRSPEAVEDAIVESVRELARNLPICAV GIGAAGWIDTEQALVRFSPHLAWRNEPLRDRLSERITVPVLVDNDANAAAWAEFRFGAGQ GSRVMVCLTLGTGIGGALVINGRMFRGRYGMAGEFGHMTVVPDGHWCPCGNRGCWEQYAS GNSLVRDARALLAEGAPGAQDLLGYVADRNPGNLIGPDVTRAAVDGDRLAIELIADIGIW LGRGMANLAAALDPDLFVIGGGVSAAGDLLLEPARTVYARTLTGRGFRPMADIQKAHFGN DAGLIGAADLARHSINEPPGMARGFWPRRRTAVRKPRRTLRQSLSETLAGPVVRDK >gi|302034473|gb|GL383162.1| GENE 585 590368 - 591525 189 385 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167856514|ref|ZP_02479226.1| 50S ribosomal protein L1 [Haemophilus parasuis 29755] # 228 383 18 173 175 77 33 1e-12 MEHRYGASQVSGGAPRRGRGVAFAAITGAILLGTVASVDPGAQAAPDPIDQAKVRLAQLD EQTSKVQEDYTEAQAALDKAQKDLDRSQRDLKAQSDKVATMRKALGRVALSDYQSGGGVS MATQLVASGDSGQFLSKLATIQNVTERTSVQFQDFQAEQARLKSMKSQAEADRATIESQR NQQAKLLADAKKKEQEAKQVVDRLTAQQRAELERQQTAEVQAAAAHAVSRSTGRPTDQQS ALGQPSSSSTQASQAGSQVPIPDPSHGVSSRAQSALSFALAQLGKPYIWGGTGPTGYDCS GLMMASWGKAGVSLPRTAAAQYAAGTPVSTSDLQPGDLVFFYPGITHVGMYIGDGKFIHA SSPRTGIKVSVLAQQSSYQGARRFG >gi|302034473|gb|GL383162.1| GENE 586 591813 - 593576 775 587 aa, chain + ## HITS:1 COG:Rv2191_2 KEGG:ns NR:ns ## COG: Rv2191_2 COG0322 # Protein_GI_number: 15609328 # Func_class: L Replication, recombination and repair # Function: Nuclease subunit of the excinuclease complex # Organism: Mycobacterium tuberculosis H37Rv # 206 538 2 333 413 211 40.0 3e-54 MSAVPLQPSFDDLGTSLSEVTFCVVDLETTGTSEGSQITEIGAVKVCGGRVEGEFQTLVC PTGPIPASVQVLTGITHAMVRSAPSLSAVLPSWLEFSRSTALVAHNARFDIGFLQRAYAQ HDYPWGDPAVVDTLALARSVLARGEVRNYKLSTLSRLFHTTTTPSHRALADARATVDVLH GLIDRVGNLGVTTLEDLLEMTHRVPQARRRRRVWAKDLTEGPGVYWFCLDKPAPAHPEVL YVGKSVNIRRRVSQYFTASETRRRMDEMVRIATGVKARECSTQLEAGVRELRLIDAHQPR YNHRSRRQGSVWWVTLTHEAHPRLAVVQRAHRDSQPPWGPFISRQAATRAAIILAEAFGL RQCSGAMSRHPDGCPLAEMGRCSAPCLNPYVDYSTIVGFARLAMTGDVRDLTDRLAQRIA RLSAAERFEEAAEFTEDAQEVLRATRRRSRLVSLASCPEIVAARRDGASWEIHVIRHGRL AGAGRCRLGIDPMPIIDAVCATAETVSAPPAGLPACTIEEAELVASWFEEPGVRLVDVIG EWSWPAHCWMDTDDLAARVAALHHPGHNESDETDSQDRQARPQLTPV >gi|302034473|gb|GL383162.1| GENE 587 593496 - 594140 457 214 aa, chain - ## HITS:1 COG:no KEGG:PPA0719 NR:ns ## KEGG: PPA0719 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 214 1 214 214 332 98.0 5e-90 MLDRWSEHPVRPVPLRCPASVAMAVVTLLIAIAARLTPLSSLLASGSARAFDFQVWRPLV FSLTTSSVISAVLTGLLLVLIGYQIEPMIGSVQFAFLYLLCGVGGSAAISLAGVLYSFEG SMCGLFGLMAASAVVKYVQKQDIRADIVLLTMFIIWAIVVGSNTWVADIGAVVVGAVSGW AWLQTRWSSYRRQLGAGLAVLAVCLVALVVTWVM >gi|302034473|gb|GL383162.1| GENE 588 594258 - 594770 584 170 aa, chain - ## HITS:1 COG:MT0011 KEGG:ns NR:ns ## COG: MT0011 COG0652 # Protein_GI_number: 15839382 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family # Organism: Mycobacterium tuberculosis CDC1551 # 3 170 15 182 182 206 68.0 2e-53 MASTATLRTNHGDIVLNLFADQAPKTVDNFVGLAGGTKEYVDPHTGQPTTGRFYDGLTFH RVIDGFMIQGGCPLGTGTGGPGYRFADEFHPELTFSKPYLLAMANAGPGTNGSQFFITVA PTPHLNRRHTIFGEVADEESRKVVDEIAQVRTGRMDRPVEPVVIESVELA >gi|302034473|gb|GL383162.1| GENE 589 594822 - 596069 1092 415 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3787 NR:ns ## KEGG: HMPREF0675_3787 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 45 415 1 371 371 540 99.0 1e-152 MRQTDRNCSASRRLGPRISGLWTIWSIPWKVLDHEPYPIRIGGTVSCKKKASRKTAAASS PSTLKEQRAQALETAAAYLAAAQDKAAPLAAQVNDKLGPLTDQISDKLGPLSDQAVEASK KALDASKEYTQEKVVPALHQAYDTFQKDVLPDLEERAEKVISHPAVEEATRRGQAAFSAL KGESTELAAKAGIETKSVKKAKHRSKFGKVFGTLAVLGGISAAVVVASRRFLSSSDDGWT AHEPKVTYSWTPGDKDNTDSPAPNTDEKLKDTPSPKPETSRGSKPVAKPADKPEPKEDKS VPADPVAAMADEGGPAAAAPETTAETTAFVDEGARSETTTKDGAVKAPEQGTKDEGNKAT SYVGDNPPEGYVIKGNDRSMKYHVPGSGGYDRTIADVWFATEEAAQAAGFTKAQR >gi|302034473|gb|GL383162.1| GENE 590 596395 - 596874 339 159 aa, chain + ## HITS:1 COG:no KEGG:PPA0716 NR:ns ## KEGG: PPA0716 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 159 23 181 181 277 100.0 1e-73 MITMDLESSKTSTAWVDARFFSLHVRSLVHECRVPWRVVALLAHVPSRIVQRLAGQGDRP IHRIRVIDAVRILHISIDDINAARERIVPAGSTRARLLALHKAGCDIAEIATMLDVTMSY AANLMSGEEQMCTEMTRLRSRAACEARGLLSTAESMASM >gi|302034473|gb|GL383162.1| GENE 591 596884 - 597594 344 236 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3785 NR:ns ## KEGG: HMPREF0675_3785 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 236 1 236 236 371 99.0 1e-101 MWIILGSAVACGLALWHLRVTVPNLVEPTVEEVGDAVLAIKPTYASLTTPTRTFVVAVTA AVCGAASVCAPPWAWGVWWIWSGSVTTLVIVDYATTFLPLKLWRRCVAEAGVALLSGIVL TRPPRARWLIACVLIAGVSTGFFWLMWRLNSSLGYGDVRLAAGTGFLGATTAVLSPYPDF VRAGMMTLLSSTILGAVVAVIVTLVRKHRPSPWGSAFAYGPALWAGPWMALAISLG >gi|302034473|gb|GL383162.1| GENE 592 597581 - 597730 90 49 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3784 NR:ns ## KEGG: HMPREF0675_3784 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 49 1 49 49 84 100.0 1e-15 MLLNTVADGLQVDDGVVPQLAQRLERAAQSIDSGAAHDHLNRWISVTQG >gi|302034473|gb|GL383162.1| GENE 593 597878 - 598309 394 143 aa, chain - ## HITS:1 COG:MT3230 KEGG:ns NR:ns ## COG: MT3230 COG0784 # Protein_GI_number: 15842719 # Func_class: T Signal transduction mechanisms # Function: FOG: CheY-like receiver # Organism: Mycobacterium tuberculosis CDC1551 # 9 134 5 130 133 117 49.0 5e-27 MGDKHGELSGALKVLVYSDDHAVREQVKVALTGMIAPDLPHAEVVETATQASVVDAVSSG HYDVLIADGESAPYGGMGVCHQLKDEVDNCPPVVLLVARVADAWLASWSHADAIATHPVD PVALPQTVASVIRGIRGDAAETP >gi|302034473|gb|GL383162.1| GENE 594 598656 - 599249 554 197 aa, chain + ## HITS:1 COG:MT2249 KEGG:ns NR:ns ## COG: MT2249 COG1845 # Protein_GI_number: 15841684 # Func_class: C Energy production and conversion # Function: Heme/copper-type cytochrome/quinol oxidase, subunit 3 # Organism: Mycobacterium tuberculosis CDC1551 # 1 197 27 203 203 159 51.0 3e-39 MGVWVWLASELMFFAALFAAYFMIRQTTSDMATAGQQTLWQSESSHLTVGAAAINTLILV LSSVTCQMGVHAAEHGQVKRTKGLGAITSWGMREWYTLTFIMGAVFIAGQLAEYITLIGE GHTISSSVYFSAFFIATGFHGLHVTGGLVLFLFTLARTYMARRFTHEQAVTAMVVSYYWH FVDVVWIILFSVIYIVR >gi|302034473|gb|GL383162.1| GENE 595 599281 - 600084 652 267 aa, chain + ## HITS:1 COG:Cgl2143 KEGG:ns NR:ns ## COG: Cgl2143 COG2010 # Protein_GI_number: 19553393 # Func_class: C Energy production and conversion # Function: Cytochrome c, mono- and diheme variants # Organism: Corynebacterium glutamicum # 13 262 45 307 308 184 38.0 1e-46 MRFLSTKRHSRAAKPVLLLLALVLVGCVYAFVSPSASGRADTNASTQVARGKEIFQQNCS SCHGLNGEGTTQGPSLAGVGAAAVDFQMGTGRMPMARPEAQAPSKKTKFTDEETASVGAY VASLAPGPKVPSPQSLNTSNLKAEELARGAELFKTNCSACHNIEGRGGALPEGAYAPSLM KTSNKHIYEAMRTGPQQMPVFSKSVITDQDAREIIGYLQTTHSEPNNGGFALGGIGPVTE GLFGWIIGIGGLVLVAGWLARKGARAK >gi|302034473|gb|GL383162.1| GENE 596 600051 - 601133 776 360 aa, chain + ## HITS:1 COG:Cgl2142_2 KEGG:ns NR:ns ## COG: Cgl2142_2 COG0723 # Protein_GI_number: 19553392 # Func_class: C Energy production and conversion # Function: Rieske Fe-S protein # Organism: Corynebacterium glutamicum # 242 351 92 204 204 126 48.0 6e-29 MAGTEGGSREVSDKYTERDDLPVDNPGVEPHVERYTDANPKAGNRAYRQVLTLLSLVPVL AIAFVVVYFAVPRDATVEIGPLYMNASTFGLGLCAGLAVLFIGIACIHWAKQIMGDEEII QERHPVNSDATDRKEFAKQWRIGAEQSGLSRRKLIGGALGGAIGIMAVPAIVTLADLGPK PGPGTRRATIERTIWAEGVRLVNDVTFQPIKASDLEIGQLVNAEPENLKELEGVEFQRAK AKAAILIVRMDLDSIKIPESRKDWQVGGILSYSKICTHVGCPVNLWEQQTHHLLCPCHQS TFDLGDSGVVVFGPAGRSLPQLPITVDDKGYLVARSDFTVPVGPSYFERDSRHDYKKGDN >gi|302034473|gb|GL383162.1| GENE 597 601133 - 602812 1426 559 aa, chain + ## HITS:1 COG:Cgl2141 KEGG:ns NR:ns ## COG: Cgl2141 COG1290 # Protein_GI_number: 19553391 # Func_class: C Energy production and conversion # Function: Cytochrome b subunit of the bc complex # Organism: Corynebacterium glutamicum # 35 484 11 458 539 507 53.0 1e-143 MARPTGIAEESPTLRTATADDKPTGRGMRIVNWHDDRLGLAKMGKENLRKVFPDHWSFLL GEIALYSFVALLLTGVFLTIWFKPSMAEVDYTGPYQLLKGTPMSEAFASTLDLSFEVRGG LLIRQIHHWAAILFVAAATVHMLRIFFTGAFRKPREINWLIGLGLFMLAMVEGFAGYSLP DDLLSGTGLRFADGLMRAIPLVGTWVEFFVFNGEFPGTAIVPRLYMVHILLIPALLLGLV AAHLALVVYHKHTQYPGPGRTEKNVVGYPLFPVYAAKAGGFFFVVFGVLTLMGTFLQINP VWKFGPYNPGEVTAGSQPDWYMGWLEGAVRITPNWEWHIGHTTWSWNIFLPGVCLMGVLF TLLVAWPFVEKWITGDESEHHLLDRPRNVPTRTALGVAAMSCYAMFWLSGANDIIATHFH LSLNSITYFMRGAIFVVPIITYQITKRICVALQRADRQRLLLGSPSGEIIREPNGAFHEA HVPVSDNEAWTLTQQKTYPILTAGSIDDRGRKVSKKRARWMKWFLGDNVPTVTREELEAA RCHAEIGSGDSAPQAEIAD >gi|302034473|gb|GL383162.1| GENE 598 602861 - 603178 205 105 aa, chain - ## HITS:1 COG:Cgl0149 KEGG:ns NR:ns ## COG: Cgl0149 COG3695 # Protein_GI_number: 19551399 # Func_class: L Replication, recombination and repair # Function: Predicted methylated DNA-protein cysteine methyltransferase # Organism: Corynebacterium glutamicum # 8 78 13 81 114 57 42.0 8e-09 MTSTVDDVLAAVEALPAGTVVSYSDVAQLVGTSPRRVGTIIACEGQEVDWWRVTTVRGTL PEHLMAHARQHWDEEGLGGGTTMLRDHAPDPAEWERNWQQLRGRI >gi|302034473|gb|GL383162.1| GENE 599 603217 - 604698 909 493 aa, chain + ## HITS:1 COG:Rv1843c_3 KEGG:ns NR:ns ## COG: Rv1843c_3 COG0516 # Protein_GI_number: 15608980 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Mycobacterium tuberculosis H37Rv # 207 492 1 278 278 331 62.0 2e-90 MTWDNGYVRFLNEQPNYDLTYNDVFMAPNRSSVGSRMNVDLTSTDGLGTPLPLVVANMTA ISGRRMAETIARRGGIAVLPQDIPADFVARSIRRVKDAHTRFDTPVTVNPTTTVGEAMNL FNKRAHGVVLVVEDHRPVGLVSPIEAEGVDRFAQCHEVMTTDLTLVGPQASPDDVFQTLA ERHQKVAVAVDEDGVLVGIMTSRGALRTEIYRPAVDPDGHLMIGTAIGINGNVAERARNA LESGSDVLVMDTAHGHQDQMIRAIEIADEARTAFETKTGRRVSIVAGNIVTRSGTLDLLE AGADIIKVGVGPGAMCTTRMQTGVGRPQFSAVLECAEAAAEVDGAVWADGGVRHPRDVAL ALAAGAGSVMIGSWFAGTHESTGAMLIDHDGRMYKESFGMASARAVRHRTRERSAFERAR AALFEEGISQSKMYLDPQRPGVEDLVDFITSGVRSSCTYAGAANLTEFHEKAVIGVQSPS GYEEGRPLQRSWT >gi|302034473|gb|GL383162.1| GENE 600 604763 - 605419 480 218 aa, chain + ## HITS:1 COG:Cgl1506 KEGG:ns NR:ns ## COG: Cgl1506 COG0702 # Protein_GI_number: 19552756 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate-sugar epimerases # Organism: Corynebacterium glutamicum # 5 215 9 221 224 138 37.0 6e-33 MTAHRILVIGGHGHVAKHFTQLAASQGRQVDSVIRRNDQAHDVTSWGGNPVVTDVTTLRP SQWDDLISNHDAVVWSAGAGGKGAPEDTYAVDRDACTALVDAIGRSPHGPRFVLVSWCGS PNHGVPSDNSFFPYADAKAAADRHTMDSSIRWTILGPVTLSHDPASGVRILTEGEEYAGT TVSRETVAQAALACLDDGTTAGKFIRFCDGPTPIAEAF >gi|302034473|gb|GL383162.1| GENE 601 605945 - 606232 165 95 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|314979285|gb|EFT23379.1| ## NR: gi|314979285|gb|EFT23379.1| hypothetical protein HMPREF9573_01382 [Propionibacterium acnes HL072PA2] # 5 76 1 72 85 131 95.0 2e-29 MARSMQIFEQTHRTCHQKKRQSKAGPQPYRGSRSTTLIDSPIAKKPDPFTQNAWHALTAS CHYAHPTVAVRRVREKIYVIWFLVSVNLSECRHSS >gi|302034473|gb|GL383162.1| GENE 602 606479 - 606700 124 73 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|289426867|ref|ZP_06428593.1| ## NR: gi|289426867|ref|ZP_06428593.1| conserved hypothetical protein [Propionibacterium acnes J165] conserved hypothetical protein [Propionibacterium acnes J165] hypothetical protein HMPREF9593_00912 [Propionibacterium acnes HL046PA2] hypothetical protein HMPREF9604_01615 [Propionibacterium acnes HL036PA1] hypothetical protein HMPREF9605_02303 [Propionibacterium acnes HL036PA2] hypothetical protein HMPREF9611_01607 [Propionibacterium acnes HL063PA1] hypothetical protein HMPREF9606_01585 [Propionibacterium acnes HL036PA3] hypothetical protein HMPREF9614_02413 [Propionibacterium acnes HL002PA2] hypothetical protein HMPREF9573_01383 [Propionibacterium acnes HL072PA2] hypothetical protein HMPREF9595_01660 [Propionibacterium acnes HL005PA2] hypothetical protein HMPREF9596_01529 [Propionibacterium acnes HL005PA3] hypothetical protein HMPREF9610_00928 [Propionibacterium acnes HL027PA2] hypothetical protein HMPREF9615_02277 [Propionibacterium acnes HL002PA3] hypothetical protein HMPREF9572_00621 [Propionibacterium acnes HL072PA1] hypothetical protein HMPREF9337_01469 [Propionibacterium acnes HL096PA3] hypothetical protein HMPREF9568_00688 [Propionibacterium acnes HL013PA2] hypothetical protein HMPREF9563_02138 [Propionibacterium acnes HL020PA1] # 1 73 49 121 121 137 98.0 4e-31 MGYRRAGLGIMNVSSKNNDIMSSYENKSGTNARWYHDADGKGRCVTMLAYRSDNDINTWD DDELTSWATNGSC >gi|302034473|gb|GL383162.1| GENE 603 606805 - 607431 265 208 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 207 12 218 245 106 31 2e-21 GSTRVHAINNVSVSFTHSGVHLLMGESGSGKSTLINLLAGLDTPDSGSVYAEGVTVSDQS EANRARFRLRHIAVIFQDDNLIAELTNTENIALPLWAQGTSKSDATEIAHEAMRKLGIES LGRRHPGEVSGGQRQRVGVARALASGQHILLADEPTGALDSTTSEGLFELLGNLAHDNQM CVIVATHDPLATKHCDSVTTLLDGQLVA >gi|302034473|gb|GL383162.1| GENE 604 607428 - 609866 343 812 aa, chain + ## HITS:1 COG:no KEGG:PPA0704 NR:ns ## KEGG: PPA0704 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 812 1 812 812 1473 99.0 0 MNRRLTAQTFHIWTRNKHRINLSCPFAVVIACFIALYLTLSSFALTGSQKRISYLDGHDA SITISQTQTTLRPAQGTVIDRLRKSGARNISVITTGSSFQIDGFRTTGLSTGFHDRIQYM EWASGSPASRYHLTTGHWPSSPGEVALSEPLAARLHDPSRIHVFSDTSRLRVVGTFHDAY ATDALVAIGAASGWKSMSAAASKGYPSLSPIVEYVWDGLPLSTAIPLFSTLYGTPTDSLV TSSRDGAKISASPQVSLASRSPYLVMIPCLLLTGAVQLTVMARIATSIRAQRQSMLKLGI PLSATLASALGSVLAICLAAWSVGVCGGWILGMALRRFLVPHLLTQPISPPVSIAPLAMT LLALTVAMSIAAIPLTGPRAGGRNRTTPHHARSATTLRWVRRVAGVLLIIGGLLALQNRT QLDDVIHGAIFVSSGAVLLMPDLISGIISVIKLPTPAGLLAVKTLHFNDARIRIMGSALC LCLVIPASVNVIMTSYQQSTAALSMAPPDTLILQSPDSNPVPKDLPRSVQAATGMKRAVK VDMLSGEITSNHHSGTAQAVMVVSSPEDAERVLNMKLTTEERTHLNNSFMLSFSDGPAKT ILALDDGRRAAIPSSRVEVNPTWAYIYGGVIVKATLERIRAQSIPHQWVYTGVQKSGITQ AVNYVHRQGLDPQLLTYHVEPEPPQMPFAWWTVCLTLVIIAAGITASVSASLGHIARNQS RQLLAIGLPKRLGAMIPILESMLLVGLCSVIASVLAIVPVVVGRSLSESFTLWVPKDWVI LWCAGLGLLIVLSPLAGLRAIRARERTADALI >gi|302034473|gb|GL383162.1| GENE 605 609918 - 610313 512 131 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3772 NR:ns ## KEGG: HMPREF0675_3772 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 131 1 131 131 231 100.0 9e-60 MKPERWVFGGLGLFYLVVTPVYWFTAHEVAGTWVLGLSAAMALMVFFYVQVIAKKINPRP SDEKDAEVIDGAGPVGFFPPQSIWPFWCALVVAIMCLGPIFGWWISLLGLGIGIWAASGW AFEYYRGDYAH >gi|302034473|gb|GL383162.1| GENE 606 610313 - 612031 1611 572 aa, chain - ## HITS:1 COG:MT3128 KEGG:ns NR:ns ## COG: MT3128 COG0843 # Protein_GI_number: 15842607 # Func_class: C Energy production and conversion # Function: Heme/copper-type cytochrome/quinol oxidases, subunit 1 # Organism: Mycobacterium tuberculosis CDC1551 # 11 548 5 548 573 689 66.0 0 MTSASIAQRTAPPAITRQERRKASFGALVWDYMTTTDHKKIGRLYFGTSLFFFVFGGILA LLIRAELAYPGMQFMHQETFNQLFTMHGTIMLLMFATPLFSGFANFFMPLQIGAPDVAFP RINQFAYWLYLFGSLMACSGFLTPGGAASFGWFAYAPLSDAINSPGVGGDLWVMGLYLLG LSSILGAVNFVTTIILMRTPGMTMFRMPIFSWNILITSIMVLVVFPVLSAGLLVLEADRA LGAHIFDAANGGPILWQHLFWFFGHPEVYVIALPFFGIITEVLPVFSRKPVFGYVGLVFA TLAIGGLSVSVWAHHMFVTGAVSLPFFSFMTFTIAVPTGVKFFNWIGTMWGGSLSFDTPM LFAIGFLTTFLFGGLTGVMLASPPMDFNVSDTYFVVAHFHYVLFGTVVFAMFAGFYYWWP KITGHMLNETWGKIHFWTLFVGFHTTFLVQHWLGVEGMQRRIADYGAWEGFTLLNQVSTF GAFLLAISMLPFAWNVWITRHDPNIEVADPWGWGRTLEWATSCPPPAHNFTKMIRVRSTS PAFDINHPEAALAPETGEANPRELVHSGKEDA >gi|302034473|gb|GL383162.1| GENE 607 612028 - 612741 694 237 aa, chain - ## HITS:1 COG:MT2256 KEGG:ns NR:ns ## COG: MT2256 COG1622 # Protein_GI_number: 15841691 # Func_class: C Energy production and conversion # Function: Heme/copper-type cytochrome/quinol oxidases, subunit 2 # Organism: Mycobacterium tuberculosis CDC1551 # 4 207 71 324 363 173 36.0 2e-43 MGNMWIGAWVAALVIGVFVWGLIGFAAFKFRRKDGDPAIPRQSRYHLPLEVLYTIVPFLV IGVLFFYTVRTENKVLDKNPDPQHVVNVVGQKWSWTFNYMEANNPDAGGVVTHEVGTIEK IPNLYLPVSQSVRFRLKSADVIHSFWVPAFYFKMDVIPGHPNQFDLTPTRIGVYDGKCAE LCGTYHANMIFKVHVVSVEDYNKHLQQLKAQGDTGEIKPANSVAALTTTESNEGEKK >gi|302034473|gb|GL383162.1| GENE 608 613117 - 613470 399 117 aa, chain - ## HITS:1 COG:ML0871 KEGG:ns NR:ns ## COG: ML0871 COG0316 # Protein_GI_number: 15827394 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mycobacterium leprae # 10 117 11 118 118 164 74.0 4e-41 MTDALTPPATDGIILTDAAAAKVKSLLDQEGRDDLALRLAVQPGGCSGLRYQLFFDERHL EGDVVKTYGGVDVVTDRMSAPYLAGATIDFMDTIEKQGFTIDNPNATSTCACGDSFH >gi|302034473|gb|GL383162.1| GENE 609 613641 - 613931 392 96 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3768 NR:ns ## KEGG: HMPREF0675_3768 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 96 1 96 96 164 100.0 1e-39 MIIRIVGEGQWQVPDTEMGHLNRIDARVEHAIGTTSQNELTEALTELVTTVRTVGTPIAD DNIIDSDLIVPDVSATIEEVSVWLSENPAGDGLIPG >gi|302034473|gb|GL383162.1| GENE 610 613928 - 614731 890 267 aa, chain - ## HITS:1 COG:MA1460 KEGG:ns NR:ns ## COG: MA1460 COG1842 # Protein_GI_number: 20090319 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Phage shock protein A (IM30), suppresses sigma54-dependent transcription # Organism: Methanosarcina acetivorans str.C2A # 3 233 2 231 246 179 52.0 5e-45 MAGIFARLSTVFRSKANKALDKVEDPRETLDYSYQRQLDMLQKVRRGVADVATSRKRVEL QMNQLQTDVDKMQNAASRALEQGREDLAREALTRKATLQAQLNDLQTQHATLQAEEEKLI RGSQRLQARVDAFRTKKETIKATYSAAEAQTRINEAFTGLNEEMGDIGMAITRAEDKTME LQARAGAMDELIASGAIEDPTRSYGDDITRELDSLANDHAIDAELSALKAQLGTGRDGSA PELESGAENGTDPHTGSRSVRRQEDQS >gi|302034473|gb|GL383162.1| GENE 611 614930 - 615685 483 251 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3766 NR:ns ## KEGG: HMPREF0675_3766 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 251 1 251 251 387 100.0 1e-106 MGLFRPYEQGTSKKTGPTEETVEAGPGSSTESSSSSATTAPRRAPKTSSTGRKQRASKGD HATKKPETADHKAPVAQPKTVSRHTAKKGPTPTRAEAEAARRHRLNPTLSKKEARKRERL AKRERQAAAMEAAERRPERGYLRDYIDSRWTFSEFIMPIFLAVMVIWLAMLFIAPTAVGA INAMSLGMLIVMILWLIDSWRLWHGAKKGIRARYPSAPLRGLWSYLNNRAMTVRRWRNPA PRVERGERIDS >gi|302034473|gb|GL383162.1| GENE 612 615729 - 615947 243 72 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3765 NR:ns ## KEGG: HMPREF0675_3765 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 72 1 72 72 116 100.0 3e-25 MSYSWLFKQSRITVKGSEHLGELGAGQQFESQEEAEAWLSETWPELQDAGIDEVTLMEDD DVVYGPMELSEG >gi|302034473|gb|GL383162.1| GENE 613 615917 - 616396 308 159 aa, chain - ## HITS:1 COG:no KEGG:PPA0695 NR:ns ## KEGG: PPA0695 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 159 1 159 159 257 100.0 1e-67 MGPVIPRGDTSSISLVEGCQVRGGAVVMSRQYGEFVGSTTSAQHSAPLGRASHPKLRLVL DVVVAAAGVALLVWGIMVMASPTVSCRGVEMHPGDTCHKATYTATHTDTVQTYEQRRRSI AQSRPTVIGLGIALTAFGAVMTWQTVRVRDHPSDSSIGP >gi|302034473|gb|GL383162.1| GENE 614 616431 - 617957 1509 508 aa, chain + ## HITS:1 COG:Cgl2156 KEGG:ns NR:ns ## COG: Cgl2156 COG0260 # Protein_GI_number: 19553406 # Func_class: E Amino acid transport and metabolism # Function: Leucyl aminopeptidase # Organism: Corynebacterium glutamicum # 71 502 86 506 513 286 41.0 5e-77 MRGILVANSTQLPIRPRPDLKVSRNANGADVVIAGLVEGSQGPTVQGLAPRAVKEAEETF GAPLVEVAIRAGGSTKIGSTVVLPWFGNSLVLVGCGAEGFDGESLRKAAGSGARAAADLS HGSSLKVAVDMGTVSAEQVRIAAEGALLGCYKVPTITATSNEPEISTVTIVSNARGAKPE LNKARILADAVYTARDWVDAPANLLYPKTFAASVQSWCNNLSDVTVDVLDEKALGRGGFG GILAVGGGSAHSPRLVRVEYAPEGSTTTLALVGKGITFDSGGLNIKTAANMYTMKCDMGG AAAVLAAIGAIARLGLNVRVVAYGCLAENMPSGSGWRPSDVVTMYDGTTVENGNSDAEGR IVMADGLARACEDNPDFIVDISTLTGACMVALGNHTAGVMTSGAQAADTLLDASEAAGED FWELPITDEVREGLHSDIADVKSSGAREGGAMLAAAFLQRFVTPGIDWAHLDIAGPAYNE ASAHDYTPIQGTGFGVRTLVQLAAHMAG >gi|302034473|gb|GL383162.1| GENE 615 618118 - 619851 1674 577 aa, chain + ## HITS:1 COG:ML0861 KEGG:ns NR:ns ## COG: ML0861 COG0508 # Protein_GI_number: 15827386 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes # Organism: Mycobacterium leprae # 1 577 1 528 530 437 51.0 1e-122 MSTEVTLPALGESVTEGTVSRWLKAVGDTVEADEPLLEVSTDKVDTEVPSPASGTLLEIK VPEDEDAEVGAVLAIIGDPSESGSAPAEAPSGNNEAAEPQPEPEPAAERKPAPSGGSAQG VEVTLPALGESVTEGTVSRWLKAVGDTVEADEPLLEVSTDKVDTEVPSPASGTLLEIKVP EDEDAEVGAVLAIIGDPSAVESAPAPAKPTAEPAEKAKPEPVKSEAEEAPAPTAPKPAEA PKPAGTNEVAPRATNPSSDVYVTPLVRKLARENNVDLSTITGTGVGGRIRKQDVLAAAGK SGEAPSAPQAPAAAPAPAAPKPAGSARKASQEVSPEAAALRGTTEKMSRLRKVIASRMVE SLQISAQLTATVEVDMTAISRIRNAEKAAFKAREGVGLSYLPFITKAVVEALKANPTFNA NIDTEVGTITYGSSENIGIAVDTPRGLLVPVIKNAGDLNIAGLTHQIGDLAARTRDNKVT PDELSGGTFTITNYGSAGALFDTPIVNQPEVAILGTGALVKRPVVVTNEFGEDTIAVRDM MYLSLSYDHRLIDGAVAARFLSGIKARLEEGDFAGEF >gi|302034473|gb|GL383162.1| GENE 616 620079 - 620843 593 254 aa, chain + ## HITS:1 COG:Rv2217 KEGG:ns NR:ns ## COG: Rv2217 COG0321 # Protein_GI_number: 15609354 # Func_class: H Coenzyme transport and metabolism # Function: Lipoate-protein ligase B # Organism: Mycobacterium tuberculosis H37Rv # 29 204 21 192 230 194 57.0 1e-49 MKPRGWVDHPAGLHFEYLGIADSRPTRTEYNECWAHQREVHAEVSAHQRPNTVIYVEHDP VYTAGRRTRKEAYPFDGTPVVPVDRGGEITWHGPGQLVGYPIVFLQRGIGVVDYVRRVEE AVIRLVAQYGLRAGRVPGRTGVWFPSDGMGPERKVCAIGIRVSRQTAMHGFALNIDPDTA GFDNIIPCGISDADVTSMARELRRLHGPDAEVPSLLEVAGNLEPILTEMMSFQPYEMSPD IPRREHPAFLHPMP >gi|302034473|gb|GL383162.1| GENE 617 620899 - 622836 1572 645 aa, chain + ## HITS:1 COG:MT0111 KEGG:ns NR:ns ## COG: MT0111 COG3336 # Protein_GI_number: 15839482 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Mycobacterium tuberculosis CDC1551 # 99 632 116 657 661 248 31.0 2e-65 MTYPSHARTTGPLLAATGVAMAIVAAVIGRLRPLEPRLLGRENPDVLTSVLHAVVETLFW TALVWTLTELVRATLCSPHRDVVDSTRTRGRRAWLAAQMWVVLALLMIPLESADSAGLTF EQAFLDLPTYITSTPSVAAWLVVAVLGLLVGLLALLSTHLGGLVVASLLTVLAALPVPVT GAISVGLNHDFATDSGALATVGMTVAAACVLVEVLDGPRPALTDRLIWKQRIGAAVTLAG SIVVTWQGQAERSWGSDRWGVARLIVLVATVIWVVITWLPRTRMLSWLGVTMVAVVLIVT GAANQLVPPRYLIGQTPAVNYLGYELPPAPTAAILLAPGRPNIGFWTLSVLGIVGYYVAV RTLKRRGEAWSGARIGSWIGAWAVVIYLASTGLWEYSSMQFSWHMLVHMTFNMLVPALLV LGAPITLLRRVLRSGDQINDGFNGPHDCLMATLEWRPTKILFGPFAAWIVFIVSFYVVYF TPIFGYLMRYHWGHQWMLLHFLVAGFMLFEYVIGLDDLPVSLPHIGRLGFVITAMPFHSF FAVITMNAHQIIGKDFYEALSIPWVPNLHDDQNVGGQITWATGEIPMALVLIALCVQWFI SDRRDQRRVDASEDADLDESLAAYNDMLARMAGQEIKPHDPGTKS >gi|302034473|gb|GL383162.1| GENE 618 622833 - 625076 1409 747 aa, chain + ## HITS:1 COG:Cgl0382 KEGG:ns NR:ns ## COG: Cgl0382 COG2217 # Protein_GI_number: 19551632 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Corynebacterium glutamicum # 20 747 17 754 755 554 44.0 1e-157 MSTAAMSPPDEEQTVLHPPVQLQISGMTCAACATTIEKRLSRIDGVHASVNFASERATVT GMGVKDAIAAVKDAGYTAALLSDIDLAAEAERRITMLRRRLIVAVLLTLPLMDIGLVLAL EPQLRFPTWDWLLVSLSLPVVFWSAWPFHKATWTNLRHGMTSMDTLVSLGVLTSFGWSFI SILIGAQDQEGYWLGYGITPAGADTLYLDVAAGVTCFLLAGRYFEARAKRSARSVLTALR QLAAKNARVLRNGIETVVPVEQLHQSDLFVTLAGETLAADGEVVEGSSSIDTSMMTGEPM PADVTVGSAVLGGTMNLTGRIVARATGVGDHSQLAHMAVLAEEAQARKANVQRLVDKVVE IFVPAVLAIVVLTFFGWWIAGAGTRHALSAGLSVLVIACPCALGLATPTALMVGVGRGGQ LGILIKGPEALEASGRIDTVVLDKTGTVTSGEMTLVATLPAKGQDVDRAHRYAAALDQHS THPVAKAVVAAVKGTIPACPSPRTLAGRGVSGEVEGHRVMVGNPAFLTEAEIKIPAELSH TVEKAAETGRSAVLVAIDGQAAAALVVADTVKPEAPEVIAQLKNMGLRTVLLTGDSKAAA KVVGTQLGTDEVLAEVLPTDKAEVVERFRSKGRVVAMVGDGVNDAAALASSDLGMALVTG TDIAMRSADIICVRHHLGVVPDAIGLSRRTLRTIRGNLAWAFIYNIAAIPIAAAGFLNPL ISGLAMSLSSLFVVTHSLRLRNFGTRS >gi|302034473|gb|GL383162.1| GENE 619 625033 - 625242 74 69 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQISVDHSATHVAVLRTHCGPSLDPVGFVLDGRLRILDLDSEELSTVCFDTHAGQFNCVC RSYEVSGNG >gi|302034473|gb|GL383162.1| GENE 620 625189 - 626079 773 296 aa, chain + ## HITS:1 COG:Cgl2160 KEGG:ns NR:ns ## COG: Cgl2160 COG0320 # Protein_GI_number: 19553410 # Func_class: H Coenzyme transport and metabolism # Function: Lipoate synthase # Organism: Corynebacterium glutamicum # 2 274 36 308 348 395 68.0 1e-110 MGPEYRDMRRRMIDGDLHTVCQEAGCPNIFECWEDREATFLIGGDHCTRRCDFCQIESAK PEGYDKDEPRRVTESVKQMGLRYATVTSVCRDDLEDEGAWLCAETIRQIHQVTPGVGVEM LAQDFSGKQDLLDIVFEARPEVFGHNLETVPRIFKRIRPGFRYDRSLAVLDSAHEAGLIT KSNLILGMGETREEISQAMRALHDANTDLLTITQYLRPNSYLHPIDRWVTPQEFDELAEE AREIGFVGVMSGPLVRSSYRAGRLYRQAMEARGERPVMIVTGYRDGAKPAPFAAKE >gi|302034473|gb|GL383162.1| GENE 621 626568 - 626876 201 102 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313763865|gb|EFS35229.1| ## NR: gi|313763865|gb|EFS35229.1| hypothetical protein HMPREF9567_01664 [Propionibacterium acnes HL013PA1] hypothetical protein HMPREF9574_02314 [Propionibacterium acnes HL074PA1] hypothetical protein HMPREF9585_00741 [Propionibacterium acnes HL083PA1] hypothetical protein HMPREF9589_02405 [Propionibacterium acnes HL059PA1] hypothetical protein HMPREF9612_01852 [Propionibacterium acnes HL063PA2] hypothetical protein HMPREF9616_01689 [Propionibacterium acnes HL007PA1] hypothetical protein HMPREF9617_01788 [Propionibacterium acnes HL056PA1] hypothetical protein HMPREF9597_01794 [Propionibacterium acnes HL005PA4] hypothetical protein HMPREF9598_00876 [Propionibacterium acnes HL050PA1] hypothetical protein HMPREF9600_01559 [Propionibacterium acnes HL050PA3] hypothetical protein HMPREF9608_00419 [Propionibacterium acnes HL067PA1] hypothetical protein HMPREF9609_02283 [Propionibacterium acnes HL027PA1] hypothetical protein HMPREF9613_01250 [Propionibacterium acnes HL002PA1] hypothetical protein HMPREF9620_01800 [Propionibacterium acnes HL037PA1] hypothetical protein HMPREF9564_01706 [Propionibacterium acnes HL053PA1] hypothetical protein HMPREF9566_01698 [Propionibacterium acnes HL045PA1] hypothetical protein HMPREF9594_02534 [Propionibacterium acnes HL005PA1] hypothetical protein HMPREF9569_02293 [Propionibacterium acnes HL078PA1] hypothetical protein HMPREF9583_01504 [Propionibacterium acnes HL038PA1] hypothetical protein HMPREF9590_00401 [Propionibacterium acnes HL059PA2] hypothetical protein HMPREF9592_01758 [Propionibacterium acnes HL046PA1] hypothetical protein HMPREF9602_01592 [Propionibacterium acnes HL030PA2] putative oligopeptide ABC transporter, permease [Propionibacterium acnes HL096PA2] hypothetical protein HMPREF9570_02419 [Propionibacterium acnes HL043PA1] hypothetical protein HMPREF9571_02024 [Propionibacterium acnes HL043PA2] hypothetical protein HMPREF9581_02464 [Propionibacterium acnes HL087PA3] hypothetical protein HMPREF9586_01472 [Propionibacterium acnes HL083PA2] hypothetical protein HMPREF9579_02227 [Propionibacterium acnes HL087PA1] hypothetical protein HMPREF9588_00244 [Propionibacterium acnes HL025PA2] putative oligopeptide ABC transporter, permease [Propionibacterium acnes HL099PA1] # 1 102 1 102 102 181 100.0 2e-44 MGLLVCMVVMLLLMESGLIKVFAAGALLGLWLGCMRMVESESVKERKAGARVRLWVKRGN DWVGVGYQDVHVFQGGGRGKGQVCQYNAMEIRKPFFVAKLMF >gi|302034473|gb|GL383162.1| GENE 622 627260 - 627424 83 54 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|332675102|gb|AEE71918.1| ## NR: gi|332675102|gb|AEE71918.1| hypothetical protein PAZ_c07340 [Propionibacterium acnes 266] # 18 54 1 37 37 62 100.0 8e-09 MVADAPVEASEVYRIFWMGVGVVNGVYAANICWSCDQACVIPTGARVVYGYDGA >gi|302034473|gb|GL383162.1| GENE 623 627441 - 628244 788 267 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3756 NR:ns ## KEGG: HMPREF0675_3756 # Name: not_defined # Def: CAMP factor (Cfa) # Organism: P.acnes_SK137 # Pathway: not_defined # 1 267 1 267 267 450 100.0 1e-125 MKKTHLVAPLLVGAMLVPAALSAPSAHAVEPTTTISATSTHELSASDARNSIQLLNAHIA TLQSVQKSVPGSDYSDQIRDLLKAAFDLRGLIETLAHGGIPFYDPSTIMPRIKLVATTID TIHTATTTLQNKVRPAHVELGLEVTKAVLLTANPATTAKELDAEGTALKARLEKVSQYPD LTPNDVATVYVRTNFSKTIWQVRANRDRYILGHKSAAVYKTLNHAITKAVGVRLNPKTTV GNIQAARTELLAAYQTAFNSPDVKKAA >gi|302034473|gb|GL383162.1| GENE 624 628341 - 628742 151 133 aa, chain - ## HITS:1 COG:no KEGG:PPA2405 NR:ns ## KEGG: PPA2405 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 133 1 133 133 241 99.0 6e-63 MPRTYVLDMMTHGWRIRILRCAGELRRLTRAWRLVQGAGLLTAVVADHAAISRETMNCLD DGYVHVDLDMVLNVVVTPGIKVHRHGCRPLMNGYCRSCAATLPETLGKFSRGMRVAIVVR TASERRCVLRRLA >gi|302034473|gb|GL383162.1| GENE 625 628953 - 630485 1146 510 aa, chain + ## HITS:1 COG:ECs4097 KEGG:ns NR:ns ## COG: ECs4097 COG0477 # Protein_GI_number: 15833351 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 19 493 20 484 506 413 46.0 1e-115 MASSDDIITIKEMGDKRRWWQYLDATKWKLFIAALIGVTLDGYDFVLITLALPEIKAAFG LTLVQSAALVSAAFITRWLGGLILGGVGDRFGRKPAMIIATVLFAIGSLLMGFSPNFMFL FIMRMVVGFAMAGEYGSSATYVIESWHPRIRGKASSFLLSGYAIGAILAVQVDKYLVPWV DSWHAGWGWRALFITGIVPIAVALYMRRRLPEASDWETAKSREREKSSESRDAFQVLFSG RRMSLNITLVIAAMAGLLAIFALNILPFWGVLAVAIACGAIFVCLIVQFDPRRWVIGIGI MIVILSAFMYGWPILGLLPTYLTGAGYAASTVANLLTIAQFGNMIGYFVTGFMGDWIGML KWYFTSILIAQIIVFPLFFAGIKSAWLIGLLLFFNQLFGQGVSGLAPRWVSSYFPVEQRA AGVGFIYNVGALGGAIGPFVGASLAKSHGLGSALGVLSVGFGLIVVLGVGLNLPRKLQAL VNPEAVRPEDGDDRYINSGDLSSEFASSEC >gi|302034473|gb|GL383162.1| GENE 626 630558 - 632873 890 771 aa, chain + ## HITS:1 COG:PM1000 KEGG:ns NR:ns ## COG: PM1000 COG4409 # Protein_GI_number: 15602865 # Func_class: G Carbohydrate transport and metabolism # Function: Neuraminidase (sialidase) # Organism: Pasteurella multocida # 333 697 48 473 1080 160 30.0 7e-39 MTITDTYTEELAIDLTGSALMPARKGMDVQRIDGEDGSLLVEFSATSSGCLFELVGKNGR LSVDVDEDRLLGRIDLNGESRSLDAEDALGMADGTIHSVGLTADETGTHLFADGYETFSA TLRVWCQDLGATNIVINPSGVLDVRRFKMWNSALSLQAMAAKAPTATPFVEFAGSELSAR DARRIGELAHGALRARTRLRGKGQGGTVLAAQGSAGELSFEIVNGDLLLHVEVDDEPIAH VRAPGKWDDGNWHDLVAISGRGAIDLYVDGFLVAHEPGEAFFADLGKVERVTVGKDLEGA RLFGEAQTASIFSSALTDAQVKRLANVAPLRTQALFDTGYLGSKSYRIPSLIRLDSGSFI AGADQRVSIANDSPNDINFVIRRSEDGRRWDEAQIVLEYPGEGALGASVIDSVLFQDHNS GRVFCLIDQFPGGVGQPNAEPGSGFDEQGRQLLFDRDATAYVIDAEGIVTTESGEPTDYT VDETGNVFAAGAPAGNIHLATGVDPHESLLTLRTCNLILIHSDDDGRTWSRPINLNPALK QPWMRFLGTSPGNGIQLEHGTHRGRLLAPVYYNHEEGKTFSCAAVYSDDGGQTWNLGKSP NDERELFGKIVSSRNLNDDRGSTHESALVETPDGVVHSFMRNQHPSGRVAHAASVDGGET WGEVTFVEQLTEIFSQPNAISVRDELGTESVVFANASMMLPFRGCGVLRQSFDGGKTWPH NRVLNPRHHVYQCMTQQDEQTLIVLWEREWLGLFLTEVPLSWLTTSRSTLE >gi|302034473|gb|GL383162.1| GENE 627 632948 - 633916 483 322 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3753 NR:ns ## KEGG: HMPREF0675_3753 # Name: not_defined # Def: BNR/Asp-box repeat protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 322 1 322 563 651 100.0 0 MHQRISRRSALISGGAALFLSVTGQFSEHSPALATQEADVLEVFNRENSPSHFFRIPFMV STANDTLVIGCDANRATTGDSADNIDALIRRKPNASRYSISDGWEAPSLIKPLEMRDYSN KYGYAPASSSVIDGAIIEDSVRHRLMIVIDLWAWNGGVFEHLNVSPDGSVNDGRPRKFPL GDGFATVAGRDMLLLSTHNVTGDADGLRGNINLNIDRSQFDLVADLDGPRDKHGRIQIYE LIGIPRPYTTAGVDDSNLALGRRSRYSLDDGFNLFEAGIPLYVFQHGSARITPMRVFYKD SILQVFNTNHIVEIYSYDDGRT >gi|302034473|gb|GL383162.1| GENE 628 634121 - 634639 128 172 aa, chain + ## HITS:1 COG:no KEGG:PPA0684 NR:ns ## KEGG: PPA0684 # Name: not_defined # Def: sialidase B (EC:3.2.1.18) # Organism: P.acnes # Pathway: Other glycan degradation [PATH:pac00511]; Sphingolipid metabolism [PATH:pac00600] # 1 172 392 563 563 335 100.0 4e-91 MPATIDLHESAITEVLPGVLRSFNRHSASSGGKVLTAESVDGGHSWSTLTSAFGDDDQGV ACQVSALMLKQTIASPTTGEQLPALIVVSADDRRRRHGIAHVAVVHRSSRTFGPRSELEW VSHADITSPQTLFAYSSIAQLSDGRVLVLFESSPTDSWADGLQRMYLQELAS >gi|302034473|gb|GL383162.1| GENE 629 634841 - 635611 856 256 aa, chain + ## HITS:1 COG:no KEGG:PPA0683 NR:ns ## KEGG: PPA0683 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 256 1 256 256 459 100.0 1e-128 MPKSQAAKELAAKQKAQAKAEKERRKHSDNPKDWGTGKQLVETFKLTRQVDPQLLWWVIG SFVAGVVVFTVLGLILTDLWWAWLIVGIFAGAAAAMWVFQWRAKRSMYARFKGQTGSAEV ALSLLDKKKWTSTPAIAFTRQQDVVHRAVGPGGIVLIGEGHGNGLRNLLATETKRHEQVA YGTPVTSIIMGDGKGQVPLEDLDKHIKKLPKTLSTSQVDEVVNRLKALDAMRPKVPLPKG PMPSSMKGARAAMRGR >gi|302034473|gb|GL383162.1| GENE 630 635619 - 637424 1330 601 aa, chain + ## HITS:1 COG:Cgl0888 KEGG:ns NR:ns ## COG: Cgl0888 COG0488 # Protein_GI_number: 19552138 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Corynebacterium glutamicum # 5 599 3 610 611 510 47.0 1e-144 MAGTNIVNADRISKSWGTRTVLSEVSLGLSTGDVIGVVGRNGDGKSTLLALLTGSLEPDS GTVTRTNGISIGVLAQAETRRDQTVRDLVVGGQPDHVWAANREARPIVEDMLSDIDLDRA MADLSGGERRRAALVSIMLGDHDLLVLDEPTNHLDVEAVAWLAGHLRHLQERGVAMLVVS HDRWFLDEICTDIWEVHDATVEAYQGGYSAYTLARVERARIAATNEAKRQNLARKELAWL RRGAPARSSKPRYRVEAANALVANVPEPRDKLELARFSATRLGKDVLDLNEVTVTVSSDE LGERTLLDKVTWSIGPGDRIGLIGVNGAGKTTLLNLFDGSRKPDSGRVKHGKTLRLAHLR QEVDDLDSAMTVLESVNDVKARTKLATGRDASATDLLEGFGFTGQKLVTRIGDLSGGEQR RLQLLRLLMDEPNVLLLDEPTNDLDIDTLRLLEDYLDSWPGTLIVVSHDRWFLERVCDVV WALMGDGTVALLPGGISQYLEHRRNRNPGPSKSSRVGSTSRVAEPKMGAAELRQARKNMD RLDRQMGKVRDELAALHEEMAAKADDYQALVDLQAKANELDERMTNLEKQWLETADIVED Q >gi|302034473|gb|GL383162.1| GENE 631 637429 - 637617 65 62 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTDDAVYSAFGSFNIARTQSRYIFRSVGRGMANVHVTVVMMTAIAGQKRDEAGRFPEMGL SS >gi|302034473|gb|GL383162.1| GENE 632 637526 - 638590 544 354 aa, chain + ## HITS:1 COG:no KEGG:PPA0681 NR:ns ## KEGG: PPA0681 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 354 47 400 400 632 99.0 1e-179 MPRPTDLKIYRDCVRAMLNDPKALYTASSVNGLGFTYPPFAAIALTPLALIPSLPVTILH YGVSAIALAIMIDLIWRRCGHKPQPLLAAIFVAVLNFSEPIGKTFVYGQVNLQLAALVVI DVFLLPRRWRGVGVGVATGFKLTPGIFALWYLVTGQFKAALRAAAAGLVTIAIGLAVMPT ASWEYWTHYMLTPNRLGGLTWAGNQSLSGMLLRLGHGNLTLVWLVLVALCCALAGIASRR LWQEGGADQVWSLLCAGLCGCLVSPVSWSHHWVWGSLIIVAGLADRRRCQQVLALIWALA TLTWMVWWFPAGRNRELTAAWWQKILTDAYEFVGVATLIVLLSSMAQPTDRARQ >gi|302034473|gb|GL383162.1| GENE 633 638538 - 639095 438 185 aa, chain - ## HITS:1 COG:SA0175 KEGG:ns NR:ns ## COG: SA0175 COG3477 # Protein_GI_number: 15925885 # Func_class: S Function unknown # Function: Predicted periplasmic/secreted protein # Organism: Staphylococcus aureus N315 # 11 168 3 160 164 174 51.0 6e-44 MSVPSTTDRARRHPEVAALVGVVAGIFSAIVKFGWEVPFPPRTPERNATNPPQQLLEQLG FSDHFAHTLVYFNGNGLPVMSFIIHFGFAIFFGVAYCVGAERFPKITLWQGVAFGVVVYV VFHVIVMPGLGTVPAPWHQPWQEHLSELLGHIVWMWSIEVVRRDLRSRITGEPDPWVEPS MTAGR >gi|302034473|gb|GL383162.1| GENE 634 639073 - 639567 372 164 aa, chain - ## HITS:1 COG:BS_ypqE KEGG:ns NR:ns ## COG: BS_ypqE COG2190 # Protein_GI_number: 16079281 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIA components # Organism: Bacillus subtilis # 4 141 20 155 168 103 42.0 2e-22 MTAIASPLDGTLMPLSEVPDPVFAQGLVGPGVALEPTGEGDVTVVAPVAGRIVKLHPHAF VIQAEGFGVLVHLGIDTVQLDGEGFTLHAEEGHEVVVGDPLITWNPAGVVAGGRSAVCPI VVLDASSGRIGDAAVTGERIACGDQLFQWLDFPEQDANVCAQHD >gi|302034473|gb|GL383162.1| GENE 635 639567 - 639797 285 76 aa, chain - ## HITS:1 COG:SPy1986_2 KEGG:ns NR:ns ## COG: SPy1986_2 COG1264 # Protein_GI_number: 15675776 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIB components # Organism: Streptococcus pyogenes M1 GAS # 2 75 4 78 114 68 54.0 3e-12 MSKAEQILAALGGDDNIDDLEACITRLRVEVDDPSLVDEPALKAAGAFGVVQQGRSVQVV VGPEADTLAEDIEDLR >gi|302034473|gb|GL383162.1| GENE 636 639927 - 640175 179 82 aa, chain - ## HITS:1 COG:BH0844_2 KEGG:ns NR:ns ## COG: BH0844_2 COG1264 # Protein_GI_number: 15613407 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIB components # Organism: Bacillus halodurans # 6 75 8 77 100 62 38.0 2e-10 MKRVEHILAALGGVDNVVSIEPCVTRLRCQVRRCEQVDEQALRRAGAHGVTVQGHSVQVI VGPDADLLASDLEDLWEEDRES >gi|302034473|gb|GL383162.1| GENE 637 640172 - 640897 514 241 aa, chain - ## HITS:1 COG:BH0419 KEGG:ns NR:ns ## COG: BH0419 COG2188 # Protein_GI_number: 15612982 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus halodurans # 18 226 27 238 240 141 38.0 1e-33 MKYVTVRDYLVELIDTRLSVGDVVPSERELAERFGISRMTVRQAVDSLVSSGMLERRRGS GTYVRAPKVHVQSRISSFSEEMRQRGMIPDTRVLRDEEISAAPDVAVWLGIEPGEPVHYI YRVRLADGVPMAVERTWIAARVMPDLLTDGVPASIYGAMAAAGLVPTWGEDAIEAVSGDA LVCEHLQIPVGSAVLAINRRTYADDTAISYSRSWYRGDRYKLWVPISGPHRTLYPPRGGS R >gi|302034473|gb|GL383162.1| GENE 638 641073 - 642461 1589 462 aa, chain + ## HITS:1 COG:CAC1353_1 KEGG:ns NR:ns ## COG: CAC1353_1 COG1263 # Protein_GI_number: 15894632 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Clostridium acetobutylicum # 23 426 12 370 409 324 46.0 2e-88 MAKDAVATSTKKKRQIPGFSQMQRIGRSLMLPIASLPVAALLMRFGSADVLGADGLAKHA SWMQPVADVLAGAGGAIFDNLPLIFALGVAVGYAKKADGSTALAALVGYLTFTGAGTSDK TQGGVLHALAPYFSQKTGVINYGVLGGIVIGLIAAKMYEKYRRTKLPTYLAFFGGRRLVP IVTAAASVVAGVIMAIIYPAFDWLFNKQVGGFIMAHGSNPGTGFVFGTINRLLIPFGLHH LLNSLPWFQLGNCTNAAGETLHGDITCFFSGASGTNAWTGSFMTGFFPIMMFALPGAALA IYHTAKPERKKLTGGVMISVALTAFLTGITEPLEYAFAYVAFPLYLVHALLTGSSLALCN ALGIKDGFGFSAGLTDYIINFGRASELSGGPGKVLLLILIGLVYAVIYYVVFRFAITKWN LRTPGREDEGNDTTGGASVFDEAQLAASESTGKADAQKEGRI >gi|302034473|gb|GL383162.1| GENE 639 642538 - 643146 386 202 aa, chain - ## HITS:1 COG:Cgl0276 KEGG:ns NR:ns ## COG: Cgl0276 COG0586 # Protein_GI_number: 19551526 # Func_class: S Function unknown # Function: Uncharacterized membrane-associated protein # Organism: Corynebacterium glutamicum # 32 188 27 188 206 75 33.0 6e-14 MNLTAWMASINGVIAANAPHPWVIGALWGLCVIDGFFPPVPSESLVVALAAIGHPSRWLI IPVAAAGAICGDNIAYWVGRQIGHTKLFTGGPKRQKTVAWATHQLRVRGPLCILVARYIP GGRVVVNAMAGATRFSYRVFLPIDALAGVLWACYATAIGAGAASFLGNNHILAATVGIIG AIIIGVILDQILRRLMPAPQSD >gi|302034473|gb|GL383162.1| GENE 640 643170 - 644273 704 367 aa, chain - ## HITS:1 COG:TM0622 KEGG:ns NR:ns ## COG: TM0622 COG0438 # Protein_GI_number: 15643387 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Thermotoga maritima # 156 356 152 368 388 94 31.0 4e-19 MVLSRGIPSPEAPLRGIFEYDQAVALHQQGHEVILAVLDARSVRHWRKFGTRVEHAVDRN DGMTVVRLDVPLGAASARIDHRVHAIAARHLHRIVTSQWGIPDVSHAHFARFAAAAARAG FPEPLVWTEHDSHLAHPDQRLNEDIIIAGDRADAVISVSQGLCDRLAGHGVTSTVVPNIV DVELFDRPDRRHEGTIVVSVATLNPGKGMIELAQAVERLPEVQLRIIGDGPQRHQLEAIA AGNPRIVLLGPQSRDRIAEELAGADAFALASHAETFGVACAEALAAGLPVLTTACGGPQE FIDDSNGVVVPIGDVDALTEGLCQVLARSWDHEQIAGYVRSRFAAAPVVDQLETVYRKAV ADHGMAG >gi|302034473|gb|GL383162.1| GENE 641 644288 - 644710 308 140 aa, chain - ## HITS:1 COG:no KEGG:PPA0672 NR:ns ## KEGG: PPA0672 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 140 16 155 155 235 99.0 4e-61 MSGTEAAPGVSIGLPAEGRGSLASWCKRIGALIIDWGASMVLASAIFGPAVIRGGGWPMW MPMAVFFVESVLFTAMTGGSFGQIVARVAVVRLDDLGPVGWWRAVARTAMKCLVIPAVVI GAERRGLDDLVLGTVVVNRK >gi|302034473|gb|GL383162.1| GENE 642 644878 - 646245 1382 455 aa, chain + ## HITS:1 COG:ML0925 KEGG:ns NR:ns ## COG: ML0925 COG0174 # Protein_GI_number: 15827444 # Func_class: E Amino acid transport and metabolism # Function: Glutamine synthetase # Organism: Mycobacterium leprae # 2 455 21 478 478 657 68.0 0 MIDVRFCDLIGIMQHFTVPAREFDKDQYENGLAFDGSSIRGFQKINESDMALLPDPTTAW IDPFRERKTLIVNFNVHDPITKEAYSRDPRNIARKAEAYLASTGIGDTAFFAPEAEFYVF DDIRFDTRQNTSYYSIDSEAGAWNTGRTEDGGNRGYKVKYKGGYFPVAPTDHFGDLRDEI VTIMERLGMKVERAHHEVGTAGQAEINWRFDTLSRSADDVMKFKYIVKNVAWQHGKTATF MPKPIFGDNGSGMHVHSSIWKGGEPLFFDESGYAQLSDMARYYIGGILKHAPSLLAFTNP SANSYHRLVPGFEAPVNLVYSQRNRSACMRIPITGPNPKAKRVEFRCPDPSANPYMAFAA LLLAGLDGIQNKIEPPAPVDKDIYELPPEEHAAMDHVPGNLGAVLDNLEADHEFLLAGDV FTPDLIETWVELKRGDLAALQQRPHPYEFDLYYDI >gi|302034473|gb|GL383162.1| GENE 643 646327 - 646734 226 135 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3739 NR:ns ## KEGG: HMPREF0675_3739 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 135 1 135 135 251 100.0 6e-66 MAFSDVDAALGARITVLTIRNCGSSVMILPVMPQLRQITEAGARVPVAWQPYDPKARSKR LAPGKVTSWELSWHSNGDCEHRGAWRLEAKVGTTTAMLVGCLDLGSSYALTGESSTGPGG SDAVPVPEAAVRWSD >gi|302034473|gb|GL383162.1| GENE 644 646977 - 648041 481 354 aa, chain - ## HITS:1 COG:lin1003 KEGG:ns NR:ns ## COG: lin1003 COG1434 # Protein_GI_number: 16800072 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 82 346 80 333 344 116 31.0 7e-26 MGRGEMMIGLALCVVPLAFYAWLVDRRPGAWSNGIVLAVGLGMAGLTAAGIIVRTVPVIG SLIVGTLVVVAALGTAVLPFLLIVNGVEMWRKEGRSLSNVLSGALGVGLLVLMAWCLRSV FSPFEPWAVAGISATMALGWLSFGFLGYLASVFVIHRAKPLPGNHQIVVLGSALVKGKVP KLLASRLDRGIGQWRTDRDAGFHSVIIPSGGKGDDEPRAEGEAMAEYLVEHGIPRECVVV ENQAANTDENISLSRQVMPTQVRSVPSRRAEAARQRQNPQVVVATSSYHAVRAAELCRRQ GLRVRVLGAPTATYFLPSAMLREYIALLASRPWINGIMLVLVLAFWPIVTMALR >gi|302034473|gb|GL383162.1| GENE 645 648227 - 649408 597 393 aa, chain + ## HITS:1 COG:Cgl2188_1 KEGG:ns NR:ns ## COG: Cgl2188_1 COG0327 # Protein_GI_number: 19553438 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 18 137 4 123 123 147 59.0 3e-35 MADNSSRTSIPQSCSDQITVSQVRATLDQWYPPSLAESWDAPGLVCGDPDDTVKRIVCAL EATDTVVDAAIEAHADMLVVHHPLLMRGATSVAADTPKGRIVHRLIRHRIALMSAHTNAD AAVGGVNDVLARLLGVTVECPLEPAAQPVDLWGVQVPVDAAEALRNALFGAGAGQFDGYD LCSFESVGRGQFRPLSGSHPALGTTNQVETVEEVRIHVVAPAMMRSTIRKALVDAHPYEV PAYDVKTIDSGSRPGPATPGIGRIGHLDEPMTLRSFTQRVSERLPHTVWGVRTAGNPDQL ITTVALCSGAGDSLLDAAAASGADVYLTSDLRHHPADEHLRANGPALIDTAHWASESPWC ADVARRLHDELGLPCQDLGIRTDPWTIGTTVAQ >gi|302034473|gb|GL383162.1| GENE 646 649415 - 650737 842 440 aa, chain + ## HITS:1 COG:yjjP KEGG:ns NR:ns ## COG: yjjP COG2966 # Protein_GI_number: 16132185 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 263 1 277 277 70 27.0 6e-12 MTSTDPHDYRDDIRHDREFVNDTEAVIRLGSMLLSSGTGSYRVKRAMCDAGLALGIDRLD ASVSLTEITATAHRGDNFRTVAREVYRVRVDSSRIAALEDLAHNLPAGTTGRELESRLDY ISRTVRPKWAEWQTVLAGGVACAGFAILNKFSLADSLVVLAAASVGQFVRGRLNRRWLNQ FGVAALASAAACLIYLMLADLLTNTGLHTIHGPGYVASLLFLVPGFPMITSILDMVRMDF TAGFSRATYSVGLILAATMSAWVFSAATGLQPLPAQTVFPYPWAWFAYAVATACGVAGFA ILFNSSPCTVAWAAALGACGNLCRLALVGVNLPAQLAAGVGGIVIGFLASPLSVRTKLPR ITLTVPACVIMVPGASMYRTVYWLNGQDMTKALTFGVDAVLTVILIACGLAVARMCTDPA WARNLPVPSPHAFKFSEDNH >gi|302034473|gb|GL383162.1| GENE 647 650731 - 653682 1449 983 aa, chain - ## HITS:1 COG:Cgl2179 KEGG:ns NR:ns ## COG: Cgl2179 COG1391 # Protein_GI_number: 19553429 # Func_class: O Posttranslational modification, protein turnover, chaperones; T Signal transduction mechanisms # Function: Glutamine synthetase adenylyltransferase # Organism: Corynebacterium glutamicum # 52 981 58 1035 1045 646 41.0 0 MDRKSSVTIDLLRLGVMDTDAASANHHRIAENIGADPNRLADWEHHLETCCDPDLALNVL AELAQDSAQCLGEVLDHDASACRLVRLLGASSELGRHLIAHPDDLAEVIRDPVRLGHDEI CDDLLEVVGAHKEGEFTVAGTPTGPASDRLRLANRRHLVRIASRDVSADDPTEIIEDVAA ELADLADGIVTAALALARADCPDHADARLAIIAMGKCGAQELNYISDVDVMYVAEPANDD VSGASAVTIATKLAASVARMCSAHSGAGSIWQVDAALRPEGNAGPLVRTMDSMRTYYEKW AKNWEFQALLKARPMAGDLDLGQRFVEMVSPMVWQVGEAEGFVPETRAMRTRVVSLIAAK NKGREIKLGAGGLRDVEFTAQLLQLVHGRQDESLRVRATLPALRALAAGGYISRGAAERL KEAYRLERVMEHRVQMFRLRRTHLLPDDEDGLRRLARAVGLRTADEVRRVWTATSKAVLR AHGQVFYSPVVEAVARIPTQDLRMSAEAAKVRLSALGFHDEDAGLRHIEALTSGTSRAVR IQTALMPAMLAWLADGPSPDHGLLAFRQVSEALGESPWYLRALRDEGAMAQRLAVVLSTS RYAVDVLTRAPETVQVLVDDDLTPLSREDLARQMNAVARRHHDVEEAVGAIRAVRRRELF RILVADILNVTGIRRIGQALTDLTGATIDAALTAVSREVEDAPPIGIVAMGRWGGQELSY ASDADCLFVVGDGPGVGEKALKIVTKLRNLLCKHGADPAVVLDADLRPEGRSGPMVRSLE SYRKYYGKWSSTWESQALLRASHGAGDRELTNELLEYVDQVRYPADGLTGSQLAEIRKLK ARMESERIPRGVDPRRHLKLGPGGLSDIEWTAQIIQLQHAGHDPALRTTSTIDALNAALA AGYIDEGQHAKLCDSWLAASRLRNAIMVVRGRPSDVIPSDSTDLDVIAKASGMGQGASEH LVEDHLRHCRRASRVVDAVFWNQ >gi|302034473|gb|GL383162.1| GENE 648 653812 - 654615 285 267 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3733 NR:ns ## KEGG: HMPREF0675_3733 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 267 14 280 280 469 100.0 1e-131 MAARAERSVKRLATTWVATARCLLPQPNTDPLDPGEAQLWGRHHIAHLMVIFTDTLQTVT TPTTIRPMTLARVIDERRKATNTLAAIGHEVIADDTASRLASQAQRLLDNVESVLLATPG PPATVDSLVGPVRVTDQLRATLLAMAAMGLHDGIDIPSGAIIESCRTLSAVLDETHGGRT IELRVPPACAVQLAAIESGPNHHRGTPPNVAETAPVTFLQLATGFSHWPEMRSAGRVQAS GSHVDDVAGVFPVVDMAGVFRDIFADD >gi|302034473|gb|GL383162.1| GENE 649 654634 - 655935 1036 433 aa, chain - ## HITS:1 COG:MT2280 KEGG:ns NR:ns ## COG: MT2280 COG0174 # Protein_GI_number: 15841714 # Func_class: E Amino acid transport and metabolism # Function: Glutamine synthetase # Organism: Mycobacterium tuberculosis CDC1551 # 1 430 12 444 446 563 63.0 1e-160 MEERNIRFVRLWFTDVLGSLKSVAIAPAEVEGAFVEGVGFDGSAIEGYARVYEADMVAHP DPATFQVLPWRSGTSTARMFCDITNPDGTSSAADPRHVLKRTMGRAAEMGFTFYVHPEIE FYLLNDEHHPGESPVALDNGGYFDHTTLGAGTDFRRDAINVLEQMGISVEFSHHEAAPGQ HEIDLRYADALTMADNIMTFRVVIREIASLKGIKATFMPKPFTDHAGSGMHSHVSLFEGD TNAFYDAADEARMSPVAKYFVAGLLHHAPEIIAVTNQWVNSYRRLSGGGEAPNYICWGRN NRSALVRIPMYKPDKASSARVELRSIDSAANPYLAYSLVLAAGLDGIEKELPLPEEASDD VWQLSARERHALGIKQLPQSLGAAIRCMEESELVAETLGEHVYDYFLRNKRAEFEEYNRQ VSQFELDRYLPHL >gi|302034473|gb|GL383162.1| GENE 650 656039 - 656908 418 289 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3732 NR:ns ## KEGG: HMPREF0675_3732 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 289 1 289 289 475 100.0 1e-133 MASGPQAGWYRDPDGTPDRYRWFDGERWTDRTTTSPDPAPQHSGKGHREHDNGRSSSWLW AIIIVILVVAVVVAFALHRSTSSDHNAEPDLNSSSPTVSAWNEKSTTPSASSSAVTCPRG QHPGNQDSNDGRLHGGGVSVESIPNWRHENLTLPWVMGQSAQIDDVYPGWMSVSGVGGLP VAEGFSDPQTAATMMMDCFASSDYYAGYTGEKEIRSEALTIDGHPAWWKRSEVYVSLPSL PQVRGDVVDVVVVNTGQTDFLGMYFNSATIGDSTRQTLVDHARQSLKVD >gi|302034473|gb|GL383162.1| GENE 651 657312 - 658166 696 284 aa, chain + ## HITS:1 COG:MT2929 KEGG:ns NR:ns ## COG: MT2929 COG0024 # Protein_GI_number: 15842403 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionine aminopeptidase # Organism: Mycobacterium tuberculosis CDC1551 # 2 283 5 285 285 333 59.0 2e-91 MSAIKPYPQSPRRHVPGNIARPPYVGLGDVPETYDGSHVQSAETIAAMEEAGRIACGAMY EAGKAVEPGVTTDELDRIAHEYMCDHGAYPSTLDYRNYPKSCCTSVNEVICHGIPDSRPL EDGDIVKIDVTAYKNGVHGDNCYTFGCGNVDQASLDLIDHTQQAMNRAIKAVKPGRSISI IGRIIENYAKRFGHGVVRDYTGHGVHSAFHSGLVVFHYDEPRYDVTLEEGMTLTIEPMLT LGDQSNHQWDDGWTVLTNDGSRCAQFEQTLVVEKDGARILTTLE >gi|302034473|gb|GL383162.1| GENE 652 658173 - 658346 67 57 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3729 NR:ns ## KEGG: HMPREF0675_3729 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 57 1 57 57 93 100.0 3e-18 MLVHVKVLSRDRIVGEGPTTDVLSHPRGECTRAVAGAVTIPDLAIQRARRTQAAVKP >gi|302034473|gb|GL383162.1| GENE 653 658549 - 660327 1480 592 aa, chain + ## HITS:1 COG:Cgl0635 KEGG:ns NR:ns ## COG: Cgl0635 COG1966 # Protein_GI_number: 19551885 # Func_class: T Signal transduction mechanisms # Function: Carbon starvation protein, predicted membrane protein # Organism: Corynebacterium glutamicum # 43 579 41 580 759 612 61.0 1e-175 MDTVPPRTYNNSNFPEGLPAVSLSDEERARQQRWTPLRVTIWILISAIAGLGWWMLAVRR GETVNGIWFVFAAIGSYFIGYRFYAKYIQDKLVHPDDSRATPAEYDYNGRDFVPTDRRIL YGHHFAAIAGAGPLVGPVLSAQMGYLPSTIWIIVGVILAGAVQDYLVLVISMRRGGRSLG QMAREELGRFGGIAALIATLTIMLIIVAILAMVVVNSLAASSWGVWSVGLTIPIALLMGF YLRYLRPGKVFEVSIIGIVLLVLAIASGAWIENTAVASALHLSKPFLAWAIIIYGFIAAV LPVWMLLAPRDYLSTFMKVGVIAMLAISIVIVRPVINVPAMTVYATNGAGPVFSGKLFPF LFVTIACGALSGFHATISSGTTPKLIEKESQARLIGYGGMLMESFVAIMALVAALSVDRG IYFAMNSPAGATGNTVKSAIAYVNSLGLSSVHANANTLTTTAKLVGETSIVSRTGGAPTL AVGLATIMHKIFGGEAMMSFWYHFAIMFEALFILTSVDAGTRVARFMLSDALGNFWPRLK DHSWKVGSWLTTAIMVAGWGSILLMGVTATLSSRSSALPTSCWQLSPCRSAW >gi|302034473|gb|GL383162.1| GENE 654 660177 - 660818 579 213 aa, chain + ## HITS:1 COG:MT3149 KEGG:ns NR:ns ## COG: MT3149 COG1966 # Protein_GI_number: 15842631 # Func_class: T Signal transduction mechanisms # Function: Carbon starvation protein, predicted membrane protein # Organism: Mycobacterium tuberculosis CDC1551 # 27 188 582 743 758 131 48.0 8e-31 MEGWLLADYRDHGGWLGLDSAHGRHRNTLFPLFGIANQLLAAVALSICLVIFARAGHTWR LLIIFVPMLFTAIITVYGSWLKIFSPDPKLGYWANHMTYKRAIADGKTSLGQAKNIDEMH TVVGNTAIQGTMSIIFVVCALIVMIVACIRTVQALRGRNIIDTEDPAKPSKIFAPSGLMP TKAERDLQVEWDAFYEEHPELDLESVHKDKEHA >gi|302034473|gb|GL383162.1| GENE 655 660815 - 661030 108 71 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3727 NR:ns ## KEGG: HMPREF0675_3727 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 71 1 71 71 116 100.0 3e-25 MTAAPQHQPTDPLWRRCWSSLRWWVRGVTGADAYDNYLEWCRRTRHEPMSEKAFWRDQCD RQDRNPQARCC >gi|302034473|gb|GL383162.1| GENE 656 661065 - 661685 404 206 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3726 NR:ns ## KEGG: HMPREF0675_3726 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 206 1 206 206 405 100.0 1e-112 MTTRIAVSLRWDDAIDLDRAMTQQVAADCTAHLQGPGPTLIDVLDSIDDTRIELVGWSSE DGPVPLSWLRRVAGQWVRDHADGPNVVVHAGAVRPGQTISNEWRAVTGSEAPLRSPAWQE FPPFRHHLLACRGPRCNAAGAADLHARLKDKLAHALDTEILVTVTGCMFPCNHAPLIIVW PDGRCIQLTADNLDRIVEDLIGPSRQ >gi|302034473|gb|GL383162.1| GENE 657 661682 - 662479 199 265 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 24 229 16 221 245 81 28 8e-14 MTTVTTSAVLRAEALGWSVDGKTILSGVSVDVRPQMMTMIIGLNGSGKTTLLHLLAGLRK PGMGRVWLGKRDLARIGAKERSRMMALLEQNPSAHVELTVRDVVQLGRIPHLGRWRMGNL SRRQGHDDDVVEKAMATTGVSELTDRAWSSLSGGERQRVQLARALAQEPEILFLDEPTNH LDLPHQIDLLERVRGLGLTTVTVIHDLDLAAAYADDLIVLDSGRMVAGGPASTVLTPDLV RDHFGVDGEVWSSSRRGFTWNGLQT >gi|302034473|gb|GL383162.1| GENE 658 662476 - 663510 602 344 aa, chain - ## HITS:1 COG:FN0884 KEGG:ns NR:ns ## COG: FN0884 COG0609 # Protein_GI_number: 19704219 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Fusobacterium nucleatum # 60 343 64 341 345 167 36.0 2e-41 MSRWRSWLLLGIVVAALIGSALVVLGIGAVRVPVSDVARVVARRFRLIEGADVTVLNDQI VWQMRAPRVIGSMAVGALLAMCGAVLQTLTGNDLADPYLLGISSGASVGAVFVLIVGISS TLGQSVLMTLASFIGAVVALVMVLTMATGRSGELPAGRTILAGVAVGQLCGAAVSVMIMI FGESNAARSALSWTLGSFAGLRWGSTITLVVATVPALVVGMALCHILDAFAFGDISAMSL GVPVNTVRWAIMVSTALLTALSVAFAGPIGFVGLTVPHIVRFWTGSRHARLLPISALAGA LLMVWSDTAARCLRPDTEIPVGVITAIVGAPVLVVLLRRQASRS >gi|302034473|gb|GL383162.1| GENE 659 663507 - 664520 908 337 aa, chain - ## HITS:1 COG:FN0885 KEGG:ns NR:ns ## COG: FN0885 COG0614 # Protein_GI_number: 19704220 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Fusobacterium nucleatum # 61 337 18 286 286 155 33.0 1e-37 MPATPKFLRRAVAVSMLPVIMLAGCAGAPKDSSASSSASASQSNAGPITITNCGQKVTLD KPATRAVTLNQGATEDVLAIGGESKLAGTAYLDSGIPKKWKKAYDSVKVLAKEYPSKETF LSAKPDLAVSSYSSAFTDKAVGTREELKKQGIATYISPFGCPKGTPSAEATWENVWKEMR EVGTLIGQKDAADKVIAEQRMSLKEVSGNKHGNGTSIVWFDSGDKVPFIGAGHGGPQLLM DAVGAKNLFANLDGGWADGSWEKIVGSNPDVIVVADADWSTAKDKIAYLKKDPVLSQMKA VKDNKFVTVPFSQTTPGAELVDGAKTLNDGLARVTGK >gi|302034473|gb|GL383162.1| GENE 660 665014 - 665385 400 123 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3721 NR:ns ## KEGG: HMPREF0675_3721 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 123 1 123 123 172 100.0 4e-42 MNSLIVTATRWSGGWELEIGEQQHTQVRNLCNARQQVVDYLDTMDESVDHADVDITIIPE IGALADEVAQAREATRAAAEATEMAARQSRAAAQHLRAAGYSVSDSAVIMGVSRGRVSQL VNL >gi|302034473|gb|GL383162.1| GENE 661 665382 - 665576 230 64 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3720 NR:ns ## KEGG: HMPREF0675_3720 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 64 1 64 64 101 100.0 1e-20 MVKPMKYRKLVGLLREAGFTPTQGKGDHEKWRNGTTWTIITQTTECSPKVVKDALDAIER SKQQ >gi|302034473|gb|GL383162.1| GENE 662 665931 - 666221 100 96 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|328752951|gb|EGF66567.1| ## NR: gi|328752951|gb|EGF66567.1| hypothetical protein HMPREF9563_02204 [Propionibacterium acnes HL020PA1] # 30 62 1 33 39 71 100.0 2e-11 MWLWSVMGRRVVRINSSWNCVLSGKSWYPMRNVHGHEFTHAAASCGAMREPNLLRADPAL CGSRLSLCDGWCGAGALHRSAGTNHGSPSIVTTRTD >gi|302034473|gb|GL383162.1| GENE 663 666681 - 667451 609 256 aa, chain - ## HITS:1 COG:Rv2229c KEGG:ns NR:ns ## COG: Rv2229c COG1579 # Protein_GI_number: 15609366 # Func_class: R General function prediction only # Function: Zn-ribbon protein, possibly nucleic acid-binding # Organism: Mycobacterium tuberculosis H37Rv # 12 251 1 239 245 67 28.0 2e-11 MSTGPRNEEASVKAAAQDQWKLLDLAQTDRRIAQAEHRRRTLPELAELKDLAVQRRTLAE EVVAKSTALSDAKMEQERIEGDLEPARARMERNQKTVDAGTITDHKALRGLTEEIEHLGR RISRLEDDELDAMQAVEDAERAHADADRRRIELDGHIRTVLASRDAGLKGIDDELSELRR VRQTQAGGIPTDLFKLYELLRERTGMGCAKLVHGVCEGCGIATNAADLRRYEAAGDDEVV RCEECDRILVRTGESI >gi|302034473|gb|GL383162.1| GENE 664 668078 - 668251 58 57 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|332675062|gb|AEE71878.1| ## NR: gi|332675062|gb|AEE71878.1| hypothetical protein PAZ_c06900 [Propionibacterium acnes 266] # 1 57 41 97 97 116 100.0 5e-25 MAAGKVWTAWPTGNLWQYRINKRVHERRSDGMDYDGGTSDLLKAFDPSQTRISCGLR >gi|302034473|gb|GL383162.1| GENE 665 668248 - 668649 156 133 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|332675061|gb|AEE71877.1| ## NR: gi|332675061|gb|AEE71877.1| hypothetical protein PAZ_c06890 [Propionibacterium acnes 266] # 1 133 1 133 133 184 100.0 2e-45 MKVLKLAALTLAAILSATASACTKTPHKSSPENTSLAISDLPGRPISDVGARIRKDTSLY VQDASPIVGMKPSYNASQQSSDQWTILAACADETSVETSHKIQVSVIPTTKISPSIRKSI SSHRFNYTVDCSE >gi|302034473|gb|GL383162.1| GENE 666 668943 - 670439 1252 498 aa, chain + ## HITS:1 COG:HI0816 KEGG:ns NR:ns ## COG: HI0816 COG0006 # Protein_GI_number: 16272757 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Haemophilus influenzae # 82 489 40 428 430 185 31.0 2e-46 MTETRSTELNEQLRQAEKQRIPKRQTPFSKAFVEFIPTDWAPYPDELPEPLSSAPSATAH RDALAARFDSDRLVIPAGHLMRRNNDCDYPFRPNTAFAYYSGLGTDREPNAVLVVDTTAE TRDVLYFKPRAPRTDREFYADPTYGEMWVGQRESLEEMAAMTGLVCRDISQLDDALSTGD ATVRVIRDADETVTATVDSLRPRGSEDADDEFYEFSSAARFCKDDWEVEQLRDACRKSKV GFESMIAEIPEAVRKGRGERWMEGTFGRVARHLGNEVGYGSICAAGDHANTLHWVRNDGD LRPGELILIDAGIEVDSLYTADITRTLPISGTFSPAQRRVYQAVLEAQDAAAAVAKVGHD HAEIHQAAIRVICEYLHEWGILPVSVEESLSPEGGQHRRWMVHGTSHHLGLDVHDCNQAR RQDYSGPLKKGMCVSDEPGIYFKQTDLLVPEEFRGIGVRIEDDLCITDGEPEWLSKDCPR QVDEIEAWMQEIWGRACH >gi|302034473|gb|GL383162.1| GENE 667 670470 - 671342 634 290 aa, chain - ## HITS:1 COG:no KEGG:PPA0649 NR:ns ## KEGG: PPA0649 # Name: not_defined # Def: putative cytochrome oxidase assembly protein # Organism: P.acnes # Pathway: Oxidative phosphorylation [PATH:pac00190]; Porphyrin and chlorophyll metabolism [PATH:pac00860]; Metabolic pathways [PATH:pac01100]; Biosynthesis of secondary metabolites [PATH:pac01110]; Two-component system [PATH:pac02020] # 1 290 1 290 290 495 100.0 1e-138 MANTVTTRNAVPRGVVVLFAVTAVAITVTLALGSTVCATDASASCPNWPGCYVGRLTPLD ATQPWVEFIHRVISASVGLFALASVIVGMVYRHADKLLAALPIVALLGALTSGVFGMMTI KWGINSVEASFDLLAAIISMGAMWRAYFVARKPRSSWRWNGRTKLGIGAVAFLVIGHFFA VQVAGCGSLTRCMGWAMFVRGAGDGPFAGWIAQQAIMGIGMLLAIVSLVARWGRRNGWDI LCAVFIVIELVVGVLIAVNGSSHGLGTLHAIPAVLILCLTMTATMRSARG >gi|302034473|gb|GL383162.1| GENE 668 671456 - 671965 497 169 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3715 NR:ns ## KEGG: HMPREF0675_3715 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 169 1 169 169 286 100.0 3e-76 MLSVVPGRASAIFNLEYPQSVVVVDDYATAQKIVDQLSDKEFPVENLCIVGTDLKTVERV TGRRTWGSVLGQGAVSGLGMGLLVGLMMMFFTPGGAVLSLLLTGLIVGVVIGMITAAITY SMSGGERDFNSVQQVVATHYEVLAEHKVAAQAREMVSDMPFMRAKAFEG >gi|302034473|gb|GL383162.1| GENE 669 671965 - 672270 56 101 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MACTRTIGTKIRRRANSSTTSPRTSGARPGVRIWTTTSLTLPTWSPLASMTGRPRIREMN TDWDLFTPQNIPRRQTLTLRDESKKLSVLTRKLMLTSRRKP >gi|302034473|gb|GL383162.1| GENE 670 672122 - 673336 961 404 aa, chain + ## HITS:1 COG:Cgl1101 KEGG:ns NR:ns ## COG: Cgl1101 COG2239 # Protein_GI_number: 19552351 # Func_class: P Inorganic ion transport and metabolism # Function: Mg/Co/Ni transporter MgtE (contains CBS domain) # Organism: Corynebacterium glutamicum # 6 390 23 417 430 303 45.0 5e-82 MDASGDQVGKVRDVVVQMRTPGRAPLVRGLVVELFARRRIFVPMVRVHAIDAVQIMISGT VNTRVFSRRVSETLVIEDLFDRTFRRNGTPVWVMDVSMAPVRSREWEINEVALAESGRSR FIRKAPSNPTIVDWREVPSLVLASRQSTERTIAEMHEMKPADMARELHDMNPHRRAEVAM ALDDDQLANAIEELPEDEQVSLITVLDPDRAADILEEMDPDDAADLIKELPDTTAHQLLA RMEPDDADDVRSLMAYDEFTAGAMMTPEPVIVAADATVADALALVRNEDITPAEASMVFV CRPPTETPTGRYLGAVHVQRLLREPPSTMVSAIIDSDLEPMHTDAPVGAVSRYFATYNLV VVPVVNDANQLVGAVAVDDLLDHLLPADWRGDQMDGEFVEVNHG >gi|302034473|gb|GL383162.1| GENE 671 673329 - 673844 401 171 aa, chain + ## HITS:1 COG:Cgl1100 KEGG:ns NR:ns ## COG: Cgl1100 COG4420 # Protein_GI_number: 19552350 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 8 166 1 157 193 154 50.0 8e-38 MADNDQWLHDADRLDIPGPRKVKRPRVQLDSEKFGQFAEATARFMGTAKFLVYMTVIVCS WVIWNLVAIYKLRFDPYPFILLNLFFSTQASYSAPLILLAQNRQEDRDRVSMAEDRRVAA QSRADMEFLAREVASIRMQMGELATRDYLRSELRDELRSLLEEIEASPASH >gi|302034473|gb|GL383162.1| GENE 672 673906 - 675066 1040 386 aa, chain + ## HITS:1 COG:ML1080 KEGG:ns NR:ns ## COG: ML1080 COG0489 # Protein_GI_number: 15827530 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Mycobacterium leprae # 10 383 14 380 383 342 51.0 8e-94 MSTENPVVKAIADALSHVNDPEIKRPITDLNMIDEITVDEQGRAFVRILLTVAGCPLKTE LREQATEAVRSVDGVTSVSVELGTMTDEQRDALKVQLRGDVPERVIPFAQPGNTTKVIAV SSGKGGVGKSSVTVNLALALAQLGREVGLLDADIYGHSVPDMLGLGDAHPTPLDDMLLPV PGLGIKSISIGMMKPNKSDVIAWRGPILDRALTQLLADVHWGDLDYLLIDLPPGTGDIAM SLGQKLPNAEVLVVTTPQQAASEVAERAGTMAGIMQQRVLGVVENMSWLEVTAPKSRETF RVELFGTGGGQKAADALSERLGTTIPLLGQIPLDVELRSGGDDGDPIVITHPDSPAAEAI TELAKTIDARPRGLVGINLGVQPVSH >gi|302034473|gb|GL383162.1| GENE 673 675122 - 676696 1193 524 aa, chain + ## HITS:1 COG:no KEGG:PPA0644 NR:ns ## KEGG: PPA0644 # Name: not_defined # Def: endoglycoceramidase (EC:3.2.1.123) # Organism: P.acnes # Pathway: not_defined # 1 524 1 524 524 1015 100.0 0 MYHHSWHSPDARRRGVTRWATTFIAALTAACMAQMPAQASPHTSDAAPHIATSKTITDAG PIGQSGRWYTDGQGRAILTAGVNMVSKRHPYSPEADGFDDADAAWLQKNGFDSVRLGVIW KGVEPKPGEYDDAYLASITRTVRTLRAHGIMTLLDAHQDMYNEKFEGEGAPDWAVLDKGA PNLLKVGFPANQVFNLGLIKAYDSFLDNAKGPGGVGLQDRYAAMWKHVAQVVGQEPGVMG YDIINEPWPGHHYPICYVAFGWCGRAMVSLDTLYEKVGRAITSVDPDGIVTYEPYSTWNM GLDSRPARPSSPKAAISWHVYCPMNAIFGSYVGCNLPDTRTFHNADQAAQFNNSASLLSE FGATKDPGTLMGVTSKARAHLVGWLYWTYNGNSDPTTQNAADEELVRHINRPGPVTDEQV DHTKLAILAVPHLRAAAGTPTSTTWDQSTRTYQATWTAKRVAGDGDFAAGSVSEIAVPAI HYPNGYKVEVKGAKVISKAGDTRLQVSSTGEGPVSVTITPAGQA >gi|302034473|gb|GL383162.1| GENE 674 676849 - 677262 419 137 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3710 NR:ns ## KEGG: HMPREF0675_3710 # Name: not_defined # Def: putative twin arginine-targeting protein translocase TatB # Organism: P.acnes_SK137 # Pathway: Protein export [PATH:pak03060]; Bacterial secretion system [PATH:pak03070] # 1 137 1 137 137 242 99.0 4e-63 MSTAGPAEIAVLIVIAVLMFGPDKLPEMARKAARIYHYLKDIANNTRDQLRSELGPQFAD LDYQDLKPQNFVRKYVLDSLQDDIDEIKADLSGVRSDLDLGLADIRNSEGLPETPVSAPS SVVHDEAVPVPFDLEAT >gi|302034473|gb|GL383162.1| GENE 675 677313 - 678194 875 293 aa, chain - ## HITS:1 COG:MT2823 KEGG:ns NR:ns ## COG: MT2823 COG0329 # Protein_GI_number: 15842291 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Mycobacterium tuberculosis CDC1551 # 3 284 9 289 300 241 51.0 2e-63 MSAPVFGRLLTAMVTPMTFDGAVDLRRTGELAHKLVEEQNNDGIVVNGTTGESPTTTDSE KAEIVKAVVEAVGSDAAVVAGVGTNDTAHTIELAHQAAEAGADGLLVVTPYYSKPSQAGI IEHFTAVADATDLPIMLYDIPGRTGTPIETKTLIELADHARIVAVKDAKGLVVESATVMA STTLAYYSGDDAITPALLSVGGVGLVGTSTHFTGRRMHEVIDAYVDGRIDEALSTYREIL PVLTGVFAAQGATMVKAGLAHQGFTVGRVRPPQTMPTPEQAETFFGVLDRTQL >gi|302034473|gb|GL383162.1| GENE 676 678264 - 678917 580 217 aa, chain + ## HITS:1 COG:MT1258 KEGG:ns NR:ns ## COG: MT1258 COG4122 # Protein_GI_number: 15840664 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Mycobacterium tuberculosis CDC1551 # 16 216 14 214 215 127 38.0 2e-29 MSPAQPRHQVPDARSWEYADGFVAPSPALQEAREAARADQWEVLGNGTTALLTFLARTMQ AGSVVTIGTDAGVSGLALLEGMTDHGVLTSIDPDAERQAAARKVLSLARIRSNQVRLITG TPLDVLPKLRDGAYDIVLINGDRLEYVEYVSQALRLLRPGGVVVVNDALANNHIADPDNE DDDTLIIRETLDSVLETEEFTPVLLPVGEGLLLATKS >gi|302034473|gb|GL383162.1| GENE 677 679000 - 680226 1143 408 aa, chain - ## HITS:1 COG:Cgl1094 KEGG:ns NR:ns ## COG: Cgl1094 COG0448 # Protein_GI_number: 19552344 # Func_class: G Carbohydrate transport and metabolism # Function: ADP-glucose pyrophosphorylase # Organism: Corynebacterium glutamicum # 3 388 6 392 409 462 62.0 1e-130 MAKTRPKVLSIVLAGGEGKRLMPLTMDRAKPAVPFGGTYRLIDFVLSNLANSGLTQIAVL TQYKSHSLDRHISITWRMSTMLGSYVTPVPAQQRLGPRWYQGSADAIYQSLNLINDQSPD YVVVFGADNIYRMDVDAMLQYHIDSGLGCTVAGIRVPRKDASAFGIIDADQNHKITEFLE KPADPPGLPDASDESFASMGNYIFSREALVQALHDDAHSADSRHDMGGDVIPRFVNAADA QVYDFRDNEVPGNTEKDADYWRDVGTIDAYHDAHMDLVSVEPEFNLYNPDWPIWTMQEQA PGAKFVMRGSCDDTLVSAGCIISGTDIYRTVLGPRARIERWARVDESIVMNNVAIGSNAT VHRAILDKNVIVPDGAQVGVDHDHDRARGFTVSPGGVTVVGKGITVPY >gi|302034473|gb|GL383162.1| GENE 678 680370 - 681554 737 394 aa, chain + ## HITS:1 COG:MT1250 KEGG:ns NR:ns ## COG: MT1250 COG0438 # Protein_GI_number: 15840656 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Mycobacterium tuberculosis CDC1551 # 1 387 1 383 387 399 55.0 1e-111 MYVSVLTREYPPTIYGGAGVHVAQLVPQLRTLIDVDVQCMGQPREGATAHAENYPEGANG ALRAFGADLSMVDAIPDEVDLVHSHTWYTNLAGLLAGVFHDVPHVISAHSLEPDRPWKAE QLGGGYRLSSWAEKTAYDAADAVIAVSEGMRADVLRAYPELDPDKVHVVRNGVNTDEFHP VTETDVCRDIGMDPDRPSVVFVGRITRQKGLVHLVHAATELDPETQLVLLAGAPDTPQIG EEFKAAFEEVRSSRRAPVIWVPEMLPRSSVRQVFSAATVFACPSVYEPLGIVNLEAMACA TPVVASRVGGIPEVVVDGSTGHLVDGVPTDLSTPEDVATFESAFAAAINDLTRNMERAKA FGTAGRQRCIDEFSWPRIAAQTVEVYQTAIKRHG >gi|302034473|gb|GL383162.1| GENE 679 681635 - 681802 151 55 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3705 NR:ns ## KEGG: HMPREF0675_3705 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 55 1 55 55 94 100.0 2e-18 MAAMKPRTGDGPMEVTKEGRGIIMRVPVEGGGRLVVELNADEAQELLACFKDVVG >gi|302034473|gb|GL383162.1| GENE 680 681843 - 682148 213 101 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3704 NR:ns ## KEGG: HMPREF0675_3704 # Name: not_defined # Def: DivIVA domain protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 101 1 101 101 159 100.0 4e-38 MAWLLVVVVIIVIGLAVMAGSGKFGQVPPIVDDRPAPDLPEGDLSAESLRSVRFAVVPRG YSMSQVDQLLDRLASQMETGQGPDLTTTGRPIPDATGPDTE >gi|302034473|gb|GL383162.1| GENE 681 682193 - 683272 647 359 aa, chain - ## HITS:1 COG:MT1240 KEGG:ns NR:ns ## COG: MT1240 COG0624 # Protein_GI_number: 15840646 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Mycobacterium tuberculosis CDC1551 # 1 357 2 353 354 314 50.0 2e-85 MDLKPTGDLHELFRRLVDIESVSMHEAPIADAVEETLAPHRHLEVTRLGNSVIARTHLGR SERVVIAGHLDTVPVVENLPSYIEQRSDGDYLVGRGTCDMKGGIAVALALAVSLENPVRD VTWAFYECEEIAAEHNGLEKIASWRPDLIDGDFAILMEPTDGRVEGGCQGTMRFTLEVPG RAAHSARSWVGHNAIHDLSAVLERLNRWQERDPFVEVDGLTFREGLNATMLDAGVAGNVI PPTATIQINYRFAPDKTTEQARQYMEDLFHEWPMNVLDLSAPARPGLDRPLAKSFVAAVG GEPGPKYGWTDVARFGQLGIPAVNFGPGNALCAHQVDECCRLGSLDECYRALHTWLASR >gi|302034473|gb|GL383162.1| GENE 682 683513 - 684004 235 163 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3702 NR:ns ## KEGG: HMPREF0675_3702 # Name: not_defined # Def: transcriptional regulator, TetR family # Organism: P.acnes_SK137 # Pathway: not_defined # 1 163 40 202 202 301 100.0 7e-81 MADLSPSSTVYYFDDHEELLAEAAKLNIRAWAHIAETIADEAENHRPKTGVDDVIEYLIR AMITRPAPLLGHYLELISAGDNETISNAYHAGRGRLNNAISRILAVANLPYPAELVIAVI DGGIVTALSEGRDPHATVEVLLRQLISLPTHKAPMSQAPPTTD >gi|302034473|gb|GL383162.1| GENE 683 684017 - 685312 695 431 aa, chain - ## HITS:1 COG:STM4290 KEGG:ns NR:ns ## COG: STM4290 COG0477 # Protein_GI_number: 16767540 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 9 427 23 446 500 268 34.0 2e-71 MSEDRSRVVRKVIVASFLGNFVEWFDYATYSYLAVIISRVFFPQGTSRDALVQTFAIFAL SFLLRPIGAVLWGCWGDKYGRRWSLSVSILMMAVASFLIGCLPSFAVAGAFAPIGLLVCR MVQGFSASGEYAGAATFLAEYAPACRRGCYVSIVPASTAAGLLMGSLSAAMIAGCLPQGA VGTWGWRLPFLAAGPLGLLARHVWLELEDSPVYQELSESETGAAVGLGPLKTLLREHQRS LLVSIGVASLNAVGFYLVLTYLPTYLSNELGFSSRASFLSVNISLLFYLLAIFVMGWLSD HVGRKRMLVVASVGFVLFSVPLFIVMGTGQLWKACLAEGVLCLFLTANDGTMASYLAESF PTELRYTGFAVSQNLANAVFGGTASAVCTWVIGVTGSRLAPAWYLTAVSLLSLCAMVASH EHTGRDLSEVV >gi|302034473|gb|GL383162.1| GENE 684 685328 - 686389 559 353 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3700 NR:ns ## KEGG: HMPREF0675_3700 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 353 1 353 353 605 100.0 1e-171 MDMEPGIINVKQEVPGVGTMNQKVGFVSMLLSATGMGLVGTFGRLSTPVDPTTGSKYIIG DFLATGRMMVGVLGFLLIIVILGKWSELRRIRISPAIVGGGLAIGTSLALYVSATLMTTI ANAVFLIYTGPLFATILARIFLKERVGLRNGIFFMLVFTGMLLTVGLVQLGGGSVVSFGL QFGAVEGLPRKPLGDLFGLGSGVFYGLALFFYRYRGDVPSEIRGFWNFVFGTVGASVVLA LRIVFLDQTNPVAVMTGRNWLWAIVLFAVCGLGAIGLLVVAGKNLKAVELSTTAYWECVI ALLLGWLVWGESLTLTSSIGGALIVLGGAGPVVFELFGRDHLPKDERSVPDCG >gi|302034473|gb|GL383162.1| GENE 685 686513 - 687640 965 375 aa, chain - ## HITS:1 COG:no KEGG:PPA0632 NR:ns ## KEGG: PPA0632 # Name: not_defined # Def: glycine amidinotransferase (EC:2.1.4.1) # Organism: P.acnes # Pathway: Glycine, serine and threonine metabolism [PATH:pac00260]; Arginine and proline metabolism [PATH:pac00330]; Metabolic pathways [PATH:pac01100] # 1 375 2 376 376 762 100.0 0 MTKIVNSWNDWDPLKRVIVGRADNSVIPPEEPATSEKVPVDSAMRGMWGPRPLETVEKAN AQLDNLVDVLEKHGVQVDRPTPLQWNQAIGTPDFRNDSMMTCMPPRDILLTIGSEIMASA NSFRCRYFEYLAYWPLMNSYFEDDPEFKWTQAPRPRLTDKSYKHNYYDERVSLEERLERT AAKDFVTTEVEPMWDAADVMRMGKDLFIQHGLTTNRKSMEWFKRYYPDFRVHAVNFPGDP YPIHIDATFVPLRPGLIINNPNRPLPQEQRKIFEANDWQIVDAAQPAHDTPPELCYSSVW LSMNCLVLDPKTVICEASEVHQMEQMDKLGMNVIPVAFRDAYPFGGGLHCATADVYREGT CEDYFPNQVDDPTLV >gi|302034473|gb|GL383162.1| GENE 686 687716 - 687877 85 53 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3698 NR:ns ## KEGG: HMPREF0675_3698 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 53 1 53 53 87 100.0 1e-16 MNTQQSAVSDCGWSVRARFTEVSPAATSADAGDPAVSSVSGPCGLDEFCGMHK >gi|302034473|gb|GL383162.1| GENE 687 688024 - 688986 869 320 aa, chain + ## HITS:1 COG:ML1058 KEGG:ns NR:ns ## COG: ML1058 COG2171 # Protein_GI_number: 15827515 # Func_class: E Amino acid transport and metabolism # Function: Tetrahydrodipicolinate N-succinyltransferase # Organism: Mycobacterium leprae # 18 320 9 317 317 306 57.0 2e-83 MTQTTTSQTASADRRAWGWGLATVHEDGGVLDTWYPEPQLGCPDDSSAPADLHRVTEAGR DAIRNVHTEVVHTVIDLDAAPVDVSDAYLRLHLLSSRLAIPRTINLDGIFGVLPNNAWTT IGPIRMADLEKARMEARIAHAPFTVLLIDKFPRMVDFVVPTGVRIGDADRVRLGAHLAVG TTVMHEGFVNFNAGTLGHSMVEGRISQGVIVGDGTDIGGGASIMGTLSGGGKERVTIGRG CLLGAEAGIGISLGDNCVVEAGLYVTAGTKVTLPNGKVVKASELSGASDILYIRDSTTGI VKARGRGNHKIELNSDLHQN >gi|302034473|gb|GL383162.1| GENE 688 689084 - 689926 474 280 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3696 NR:ns ## KEGG: HMPREF0675_3696 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 280 8 287 287 465 100.0 1e-129 MVVLTILAGLGWGGYKVWKAVDPFATTEPEGCRVVVLGQSYDLDLEQSQNAAIITAESIR RGLPTRAAAIALTTAMQESKLRNIDYGDRDSLGLFQQRPSQGWGTAKQIMDPWYSSGKFY GELVKFSNWKTVSINDAAQQVQRSGYPEAYRKHEPLAKAWASALTGHSPSALTCINRSSK TTTVQELARTARRALAPKVATQVTGPTVTFTATDPVLVRAAVALTMASTSLGPIDRATVA TTSWRADSEHYASWGAAAGPSASPAASGTGWVSGTVTARS >gi|302034473|gb|GL383162.1| GENE 689 689927 - 691030 757 367 aa, chain - ## HITS:1 COG:ML1488 KEGG:ns NR:ns ## COG: ML1488 COG0436 # Protein_GI_number: 15827783 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Mycobacterium leprae # 6 365 7 366 367 336 51.0 5e-92 MSRRNVSASLPTFPWDTIAEARRKAQSHPDGIVDLSMGTPVDPAPGVAIAALTAAGDAHG YPQVWGTPALRAGILDHMKQVWGAPASLEETSVLPVIGTKELVASLPGQLGLGPDSTIVI PACAYPTYRVGAQLAGAKIVAVNEPDEVDVAPDLIWINSPANPSGRVLDLDEMKAWVDLA RSTGAVLASDECYGEFVWEGESVSVLDERVNSGDVTGLLACLSMSKRSNMAGYRAGFAVG DAELTSELLTVRKHSGLMIPAPVVAAMQAALADRSHVLEQVKRYRLRRNVLKPALEKAGF RIDHSEGSLYLWATHDEDCRVTLDRLADLGILCSPGDFYVAGGSDHVRIGLTATDERINA AAQRIQP >gi|302034473|gb|GL383162.1| GENE 690 691027 - 691347 263 106 aa, chain - ## HITS:1 COG:Cgl1078 KEGG:ns NR:ns ## COG: Cgl1078 COG1146 # Protein_GI_number: 19552328 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Corynebacterium glutamicum # 1 105 1 105 105 144 71.0 3e-35 MTYVIGLPCVDVKDRACVEECPVDCIYEGERSLYIHPEECVDCGACEPVCPVEAIYYEDD LPGDQEKFLDINAEFFNELGSPGGAARLGPTHKDHPAVETLPPQGE >gi|302034473|gb|GL383162.1| GENE 691 691493 - 692914 1709 473 aa, chain - ## HITS:1 COG:ECs2308 KEGG:ns NR:ns ## COG: ECs2308 COG1282 # Protein_GI_number: 15831562 # Func_class: C Energy production and conversion # Function: NAD/NADP transhydrogenase beta subunit # Organism: Escherichia coli O157:H7 # 17 473 5 462 462 508 64.0 1e-143 MTSTLLIAPLAGSLVNFVNASFIVAGLLFIFALAGLSKFETSKKGNAYGILGMVIAIVAT IVALVKLPGYSPVSIVLLFIPMLIGGAFGVWKAVKVEMTGMPELIAQLHSFVGLAAVLIG FNAFAEEGTGASTFQLSEIWIGIFIGALTFTGSLVAWGKLSGKVASKPLTLPGRNWINLG LLVVIIACGIWFSNVSGGIAWLPLALLTLASLFLGFHLVAAIGGADMPVVISMLNSYSGW AAAFSGFSLHIPVLIVTGALVGFSGAILSYIMCKAMNRSFVSVILGGFGDAPAVEGEGPA GEITEIKADELASQLSEASSVIIAPGYGMAVAQAQYPVAELAKKLRDNGVDVKFAIHPVA GRLPGHMNVLLAEAHVPYDIVMEMDEINDDFADADVVLVIGANDTVNPAAMDPGTPISGM PVLHVWEGHEVVVFKRSMKPGYAGVENPLFFADNTRMLFGDAKASVDALVAAL >gi|302034473|gb|GL383162.1| GENE 692 692918 - 694465 1409 515 aa, chain - ## HITS:1 COG:PM0753 KEGG:ns NR:ns ## COG: PM0753 COG3288 # Protein_GI_number: 15602618 # Func_class: C Energy production and conversion # Function: NAD/NADP transhydrogenase alpha subunit # Organism: Pasteurella multocida # 1 514 1 508 509 567 59.0 1e-161 MIIGIPRELLPGENRVAATPTTVPALLKLGYEVVVEAGAGEHAAQPDRAYEEAGARIVEP GEAWKADLVLAVNEPTDDQISLMRAGAVLVTFLHPRQDLALTEKLAAAGVTGLSMDMVPR ISRAQSMDALSSMANISGYRAVVEAAFAYGRTFGGQVTAAGKVPPAKVFVIGTGVAGLAA LGAANSMGAEVYATDVRPETAEQVQSMGATFLHVRTGDSDQGVSSDGYAKETSDDYNARA AELYMEQAGKDDVIITTAAIPGKPSPKLITAEMVYAMKPGSVIVDLAALGGGNCELTRPG ESYVTDNGVTIIGYTDLPSRLPGQASQLYGTNLVNLLKLATPEKNGELVLNFDDEVIRTM TVCHEGQVAFPPPPVQVAAAPKPVAKAEIASAPATPEKKPRPWPQTFGIVAVLSIALIAL LTFSPMEFVALFGTFAIAVVVGYYVVWNVTHALHTPLMSVTNAISGIIIVGAITQLGSES WGIRIVAALTVLIASINIFGGFTVTQRMLKMFRKA >gi|302034473|gb|GL383162.1| GENE 693 694458 - 694610 58 50 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|289426738|ref|ZP_06428466.1| ## NR: gi|289426738|ref|ZP_06428466.1| conserved hypothetical protein [Propionibacterium acnes J165] conserved hypothetical protein [Propionibacterium acnes J165] hypothetical protein HMPREF9573_01481 [Propionibacterium acnes HL072PA2] # 3 50 1 48 48 92 100.0 1e-17 MIMMVTLRPNVLTHDTGVARFPRLGAMWSEKWRTPLAVTHRIFEGNQLLG >gi|302034473|gb|GL383162.1| GENE 694 694699 - 694851 74 50 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVRMLTSMDGNYSDQVGDYGGYLPSGTLASGGHRCGLLTVGAMSDTTGYG >gi|302034473|gb|GL383162.1| GENE 695 694829 - 695329 493 166 aa, chain + ## HITS:1 COG:BMEI0379 KEGG:ns NR:ns ## COG: BMEI0379 COG1247 # Protein_GI_number: 17986662 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase and related acyltransferases # Organism: Brucella melitensis # 1 165 1 164 164 103 35.0 1e-22 MDVNIRTMEERDLPAASRIYNQSAVATTYSYTVVNTNVEDRLSWWRELIADSRPLLVAEV DGTMAGYANYHRFREGGGYDVTAEVTIWLDPQARGQGVGRKLMTELIRRARADDRLRNLL SVIDSDNERSISFHSAMGFVEVGRLPHIAYKLGNWRTAVLMQLTLD >gi|302034473|gb|GL383162.1| GENE 696 695419 - 695922 509 167 aa, chain + ## HITS:1 COG:Cgl1433 KEGG:ns NR:ns ## COG: Cgl1433 COG2236 # Protein_GI_number: 19552683 # Func_class: R General function prediction only # Function: Predicted phosphoribosyltransferases # Organism: Corynebacterium glutamicum # 12 164 3 154 158 134 48.0 8e-32 MTAYHADASDLEGKEILTWETFGDAAEELAAQIHHSGFDPEILIAVARGGMIPGGALTYS LGVKLTDAINVEFYTDVQETLPDPVLLAPMLDTESIRNKRILIVDDVVDSGRTLALVLEL LRGFEADVRSAVLYAKPTTVINPDFVWKATDKWIVFPWSAKPPVGQR >gi|302034473|gb|GL383162.1| GENE 697 695913 - 697664 1073 583 aa, chain - ## HITS:1 COG:SMb20767 KEGG:ns NR:ns ## COG: SMb20767 COG2376 # Protein_GI_number: 16265207 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Sinorhizobium meliloti # 8 573 1 570 572 451 53.0 1e-126 MMTGDPDMTRLVNNPDNFPSQAVAGLVSAFPNHLRPVFGGVVRAARTDRKVALVVGGGSG HYPAFAGWVGPGFADGAVCGNIFSSPSASQAYAVCKAADRGAGLLIGFGNYAGDVLHFGQ AAERLRSEGIDARCLLVTDDIASAPDHLKRRGIAGDLPVFKVTAAACEEGRDIDEVVAIF DRVNDRTRSLGVAFAGCTLPGADEPLFRVEAGQMGVGMGIHGEPGIHDETLGTADEVAAM LVNRLLADRPENPGTRVVPIVNGLGSTKYEELFVLWNDISRHLEKAGLAIVDPQVGEFVT SLDMAGVSLTLVWLDDVIEPLWLAACDTPAYRRGTVGQVDFDTTPLPQEVERVMVANPGS RASGSLAGVIVEALEVVATRLSERSSELGRLDSVAGDGDHGIGMARGSRAALAEARRVSG DGAAAATTLNAAGSAWSEHAGGTSGALWGAVLTAIGAVLGDEDPAGEDTIPRAARAALDA VIRLGGASVGDKTMVDAMDPFVTTLESSSDPLPQAWESACHAADMAAQATSEVTATVGRA RPLGDKSLGTPDPGAVSFHEVVVAVGSVLSKSALSNGRFRAQR >gi|302034473|gb|GL383162.1| GENE 698 697763 - 698812 794 349 aa, chain + ## HITS:1 COG:PH0655 KEGG:ns NR:ns ## COG: PH0655 COG1063 # Protein_GI_number: 14590542 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Pyrococcus horikoshii # 1 337 1 337 348 160 33.0 2e-39 MTHTMPALVLNGPGDVQVAEKPIPTPGPGEVVLAVEATTICGTDLRIISGEKTAGVRPGV TLGHEIAGRIASLGEGVEGLVVGQQATISIVVSCGTCRACLAGRDHLCSHCELVGYGLDG GLAPWLCVPAQAVSRGNIIPVATEIPATRLALAEPLSCVLNGHRRHGGVNPGETVVIIGG GAIGLLHTALNLACGAGRVILCEKHADRRDRAAAMGAVTTCPEHLSEVVTEHTGGYGAEL VIVAIGRNELTEESLNLAAPGGRVSWFAGFPKGSTTTITPNTVHYQELTISGGSNASRAD VHRAVDMLGRGNIDETPIVTHTFGLSQWTEAVDAVRGHVGVKIAIDPRR >gi|302034473|gb|GL383162.1| GENE 699 698843 - 702301 2224 1152 aa, chain - ## HITS:1 COG:Cgl0099_2 KEGG:ns NR:ns ## COG: Cgl0099_2 COG1012 # Protein_GI_number: 19551349 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Corynebacterium glutamicum # 400 1146 2 753 763 575 44.0 1e-163 MSIDADTWGSPSPRPADLADEAVDQVHTWLRDANGASKRRTDRAQIAAGLLSDVLSHPAG LPFTLAFIDRVVRPEDARTAAANLAELAKVDCSFLPAALQVAVRAGGRMAPVAPNVVVPA ARHALRQLVGHLVVDARPAQLTRTLKALRSAGVRLNLNLLGEAVLGDREAASRLEGTMAL LAREDVDYVSIKISAVVNQLDLWAHKATVDEVVEQLLPLYHLAENSPKPKFINLDMEEYH DLDLTMEVFQKLLDRPELRHVEAGIVLQAYLPDSLSALQGLVEWADRRTAAGGAGIKVRL VKGANLAMEKVDAEIHGWQQTPWPSKLATDTNYKRILDWALTPERTHSVRYGVAGHNLFD IALTKLLCEHRGVRDRVEFEMLLGMAPDQVERIGADVGGLLLYTPVVDPAHFDVAISYLV RRLEENAASENFMSAIFQLGHDSQLFAREEARFRTAVAGITREVPKPRREQEPDRAPDLS NGFVQSTDSDPSLPNIRVWAGEVAEKMKGCELGESTLANNHLDTIAEVNAVIATALEAQH SWAGRGGNARAEILRTVTHAFATRRGDLLAVAGAETGKILAEGDVEVSEAIDFAAWYVDR AEELEGVDGAQFVPPRVTVVTPPWNFALSITAGSTLAALAAGSSVLLKPAPQARHCAAVI SECLWEAGIPRDVLQLVDVEENEAGKHLVSHPEVDRVILTGAWETAKLFRSWRHDLPVLA ETSGKNSIIVTENADYDLAAADIIKSAFGNAGQKCSAASLIILVGQAYRSQRLRHQILDA ASSIRVGSPSDLRSQMGPLAEPASGKLLDGLTKLDPGQEWALEPVRIDEEGRYWSPGVRS GIKPGDPYHLTEYFGPITGIMYAPDLATAIAYQNGTAFGLTAGLHSLDPAEIEFWAERAN AGNLYVNRSITGAIVGRQPFGGWKRSAVGPGAKAGGYHYLQVLGTWRRAEVSAPTPADRP CALVEQFVGHIEGLVTRDERAWLLDAVARDAREWDEWFGRSIDVGGLEKERNILRYRPAS TQVRGCADAKLVDVARVVAAGLLAAGDNISVCLDPSLGEGLGRALRSVGVAVTTASDEDW YASLGASRVRLVGGNPSRAADEADGDPDLALWANEVTSAPQVELLPFLREQSVSMTAHRF GNPDAGVLSVRL >gi|302034473|gb|GL383162.1| GENE 700 702391 - 703413 529 340 aa, chain + ## HITS:1 COG:Ta0597 KEGG:ns NR:ns ## COG: Ta0597 COG1457 # Protein_GI_number: 16081696 # Func_class: F Nucleotide transport and metabolism # Function: Purine-cytosine permease and related proteins # Organism: Thermoplasma acidophilum # 33 275 35 269 460 75 26.0 2e-13 MTQTATKTNATTHKGIETTGIEIVKESQRTARPQDLFLPWFASNVSVFGMSYGAFMLGFG VSFWQAIAATLVGVIVSFGFCGIIAIAGKRGSAPTMVLSRAAFGTQGNKIPGVISWMTSI GWETSLAITAVLATTTIFRRLGWSSGNSVKICATIIVAFLIVGGAVAGYHIIMKLQAVLT WITGILTVIYLVMAVSHIDWHAATSLPAASFPAFVGTLTLIMTGTGLGWTNIAADWSRYQ SRTSPGFAIAFWNVFGASLPLVILITGGLLLAASSKKSIRRHWGRSHWRASNHPADVVPH PVLVGCDPLPVGRCHQRHLFVWTHLAHPGNPSPTPSSFSH >gi|302034473|gb|GL383162.1| GENE 701 703298 - 703855 489 185 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3685 NR:ns ## KEGG: HMPREF0675_3685 # Name: not_defined # Def: permease, cytosine/purine, uracil, thiamine, allantoin family # Organism: P.acnes_SK137 # Pathway: not_defined # 13 185 315 487 487 322 100.0 6e-87 MLAAILSLLAGAINGIYSSGLTLLTLGIRVPRPAASLIDGTILTIGTLYVVFVAPNFISP FQSFLVTLGVPLSGWTGIMMADITLRRRPYDEADLFNGSGRYGHFDPISIITFVIVTVIG WGLVVNTYEGVNWNDWQGFLLGPIGLGGREGDWAHANLGVFGALVLGYVVTLIARRGTVR RQESR >gi|302034473|gb|GL383162.1| GENE 702 703852 - 704403 320 183 aa, chain + ## HITS:1 COG:mlr6855 KEGG:ns NR:ns ## COG: mlr6855 COG1335 # Protein_GI_number: 13475713 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Mesorhizobium loti # 7 180 38 219 222 68 30.0 5e-12 MSQTWLIVIDPQTIFASPTSPWGSPAFPTIIDPIDRMVAAFHGRTIVTRWIPTATRCGSW CDYFDRWTFADRPANDPIFDLVDEAQPWAERPTIDVATFGKWGSQLSAVTGEHPHLLLAG VSTDCCVITTALAAADAGAWVKVVSDACAGSAPDNHEAALTVMDLYSPQIDVVTSSQVLA TLA >gi|302034473|gb|GL383162.1| GENE 703 704522 - 705439 1029 305 aa, chain + ## HITS:1 COG:MT2119 KEGG:ns NR:ns ## COG: MT2119 COG0803 # Protein_GI_number: 15841548 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Mycobacterium tuberculosis CDC1551 # 46 305 109 375 511 137 33.0 2e-32 MHRHLLAIATLSACALAMAGCSNSGPDSGSGPSASSDKVDVVASTNVWGSVAQAIGGDKV NVHSIIDSPDQDPHDYEATAKDKLAFSKAKIAITNGGGYDDWATKLVKSTSPQADFIDAV ETSGLKKPGDKEFNEHVFYSIDSVRKVAKVVESDLVKTSPDNKSTFETNLKDFESKLTDL KARATKVGKKHPHSTAIATEPVAGYLLEDMKIKNITPDEFVGQSETEAGPSTKVVHETTD LLTQKKASILLVNGQTSDDVTKALQKAASKANVHEVGVWETFPEGVDNYPDFIGKAIDSI DKGLA >gi|302034473|gb|GL383162.1| GENE 704 705481 - 706284 218 267 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 19 235 19 232 305 88 28 5e-16 MRIEPARLTDAKVAFGNRVLWSGLNLIVEPGEFIAVLGPNGVGKTTLLRVLLGQIPLTAG TAMVAGRPVRRGSTHIGYVPQQRSLETTAPIRGRDLVGMGIDGHKWGFGWFSRSRRRRID EAIASVGATAFANAPLTMMSGGEQQRLRIAQALVTNPQLLLCDEPLSSLDLRHQQEVTRL IDNARRTRNLGVLFVTHEINPVLPYVDRVVYVAGGKVRVGTPDEVLRSDVLSEMYGSHVE VFHRGNRIIVLADEERSTHLHAPGRRI >gi|302034473|gb|GL383162.1| GENE 705 706299 - 707153 793 284 aa, chain + ## HITS:1 COG:Cgl2579 KEGG:ns NR:ns ## COG: Cgl2579 COG1108 # Protein_GI_number: 19553829 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Corynebacterium glutamicum # 1 276 1 274 293 206 51.0 5e-53 MVFSTIINFDSFSQLVPLVRGSIIAGIILGVLAGLIGPMIHARDLAFAIHGTSELSFAGA AVALFFGASVTKGAVVGSLVAALILGLLGVKAAERNASIGIMLPFGMGIGVLFLSLYKGR SSNKFGLLTGQIVAVDTTELSTLVVVAIFVAVCLGIIWRPLFFASVDPEAAKARGVPMRF LSIVFMLLLGLTTAMAVQLVGALLVLSLLITPTAAAAKVTAHPLAMSLLSIVFATVSAVG GIMLSLGPGLPISPYVTTVSFLIYLVCLGLGAIRQRRGWSRRIV >gi|302034473|gb|GL383162.1| GENE 706 707271 - 707384 62 37 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3680 NR:ns ## KEGG: HMPREF0675_3680 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 37 1 37 37 70 100.0 2e-11 MHCYIKPVKFEIVKVRRNNGGTNQVIRDGTPMNGVAS >gi|302034473|gb|GL383162.1| GENE 707 707511 - 709355 787 614 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3679 NR:ns ## KEGG: HMPREF0675_3679 # Name: not_defined # Def: efflux ABC transporter, permease protein # Organism: P.acnes_SK137 # Pathway: not_defined # 57 614 167 724 724 954 100.0 0 MLPLILGVFVKEHVPGIGIFRTLFYLSAISSLVVIALAWSAILKDNGLVNNFLVGSGLTR IGDSGVSSRTVWIEVIGLVALPAAVLLWTSLSLSAASRRDRFMTLVRMGCDPDWCGQVFA VEVSGTAGLGALLGLALFIPVQNALGSSGTLGLTWWPWQARLRWPEWLIIVVIMVIASGW LARRALRRLLASRRPPRRRARLGTVRHLLGIVGLLLVVAAIGLEGWICLTMALAHDGQRL GDHAAGYIMGAAVFGTLGAVMSAHLIIVWCAGREQLRLPTRLGLTLARAHYLDSAAMVIA LTIMVGLAGFGSGFLVSGTHDTAGDPHHVLVQVPFTDRTATEQQALRRVTRPRRMIYTAT DGRTLVAASCADLAAFDPYPRSCPRTPATRRDASSTWTFGHDKHTTVRTIKPVSRLPVTY DDDALLARNDPRLAGLTPDILEFTADSTTGDLDRLVDQLHGAAPSYAAYAGAENPDTLQA FIQQQGIVRSGLAAGFLLILVACTAAFVELRWGMRRTIAVQQAVGTPARILRRSFLMQMI VTILPAQTMSLVVGVLAGWAINAAIGSTDANQSFDPTIAALPVTMWAVSVLAIMVTAFAT GAPRFQLSAVRDTT >gi|302034473|gb|GL383162.1| GENE 708 709397 - 709672 218 91 aa, chain - ## HITS:1 COG:no KEGG:PPA2403 NR:ns ## KEGG: PPA2403 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 91 17 107 107 173 100.0 2e-42 MSRPRGSRRSGGHRHGRIQAVNGSARFRKPWVPYLWVGVPLLLVIYFYVYPFFNTLRLSF TDTTPLGEGETGSVLEITEKSSQTTHYGMLF >gi|302034473|gb|GL383162.1| GENE 709 709808 - 711028 458 406 aa, chain - ## HITS:1 COG:slr1897 KEGG:ns NR:ns ## COG: slr1897 COG1653 # Protein_GI_number: 16329947 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Synechocystis # 53 263 36 246 433 77 26.0 5e-14 MEVLMSDSLPISRRRDLGLGATLAAGVGLSACGEGGDKGGSATAKASQLNLDTLSGEITF QAQGLKGTFDGFFNDLIKKFEKEHSGCTIKWTDLPGTDDFDTTMVTQASNGTMADVVNMS SSTIMALSRADYLLDIETSVPGIGDKFVPDVWGKLKLGKDNEHTALPWYFGPFVVTYNKD IFKDVGLDPEIPPKTMTEYLDFAKKITAAGKQAVYGNTSWYMLAEWRALGVKVMNDDFTK FTFASESNALLWLTTMADMYAKGEFRRTRLPGASIGPRSTVKDPWLSARRMRPFFATSKR MPPRHMPVPVLAQSLSMTASSRCFPGNTSRSRRRPRTLRSRPLSQSGSPVWSRARMPSLR LAPSAPRKRPRLRPTCLTSMSRMASAPRWLTMSTLPLWVIPSRRMP >gi|302034473|gb|GL383162.1| GENE 710 711245 - 712243 575 332 aa, chain + ## HITS:1 COG:VCA0132 KEGG:ns NR:ns ## COG: VCA0132 COG1609 # Protein_GI_number: 15600903 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Vibrio cholerae # 5 331 2 332 334 143 29.0 4e-34 MSSRATLSDVAKACGVSSQTVSRALNDSPLVRPETRAKVMTAVETVGYEPNLAARALAAG GSRAVGILLTTRLTHGMSTTFTALVGTLREHSRPFVLDTAIENDEESLRAALARLRGYSV QATILLAQRAKSVAIASQQRHGDKLVSVIAGHPDSPESPIVAIDQALGARLATKHLIEQG YRNLLHVPGDLEWQDASERLSSYIAVCKEVGIDPAWMPANSWGAEAGAAVAEELIAGHLP DAVLAGNDDIAIGMCHTFLTHGVRIPDDIGIVGFDDIPQARWMTPSLTTVVQDFEALGRQ AVEAAEALIAGEAPESCQLSPTLAVRHSSRRH >gi|302034473|gb|GL383162.1| GENE 711 712292 - 712624 141 110 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3667 NR:ns ## KEGG: HMPREF0675_3667 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 110 1 110 110 207 100.0 1e-52 MRCHSDTEPSLNANIIKSLNNDPTIATIVPNDIKIRHPPQRRHSQLHTRTVIDTDGSTII SYDSAGLRPGSCDEPNYQWSVVWLYLREVKIITGISYTILLTRQCPSEPP >gi|302034473|gb|GL383162.1| GENE 712 712670 - 713218 483 182 aa, chain + ## HITS:1 COG:Cgl1299 KEGG:ns NR:ns ## COG: Cgl1299 COG0765 # Protein_GI_number: 19552549 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Corynebacterium glutamicum # 5 169 136 301 316 163 50.0 2e-40 MPFGDLQFASVETEKVVTALAAAIIGLGLNEGAYLAEITRSGLESVDVGQTEAAKALGMK PSLIMRRAIIPQAMRVIIPPPGNETIGMLKTTSLVLALPFTLDLQYATSAIANCTYAPIP LLVVAACWYLVMTSVLMIGQHFLEQYFGRGFNGRSSSKRLRRQAAIQAAGTTYKNIALEV EQ >gi|302034473|gb|GL383162.1| GENE 713 713254 - 714015 608 253 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 252 1 242 245 238 48 3e-61 MVHITGLHKEFGPLHILKGIDLDVAPGEVCVLIGPSGSGKSTLLRCINQLETFEVGEIWV GGQRVGYEHDPLPDGRLKRLSDKGIAAQRARVGMVFQRFNLFPHMTALGNVMEAPIKVSG LTKEEAKPLAMSLLDRVGMADRANHYPTELSGGQQQRVAIARAMAMKPELMLFDEPTSAL DPELVGEVLNVLKDLAGEGMTMIVVTHEMGFAREVADHVVFMDDGVVVETGSASQVIGNP KSNRLRGFIDSVL >gi|302034473|gb|GL383162.1| GENE 714 714046 - 714276 160 76 aa, chain + ## HITS:1 COG:Cgl0147 KEGG:ns NR:ns ## COG: Cgl0147 COG2501 # Protein_GI_number: 19551397 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 4 56 10 62 97 63 56.0 1e-10 MHDDQMIRLGQYLKFANLAETGGQARELIASGMVSVNGEVETRRGRQLHPGDEVTVTNGG QTVTATVDLTEPDVPW >gi|302034473|gb|GL383162.1| GENE 715 714356 - 715828 1213 490 aa, chain - ## HITS:1 COG:RSc2654 KEGG:ns NR:ns ## COG: RSc2654 COG1404 # Protein_GI_number: 17547373 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Subtilisin-like serine proteases # Organism: Ralstonia solanacearum # 53 488 47 523 679 191 36.0 2e-48 MALRRTLTLMLCAITGASLVATAVPSSAAPGFTISPLRTSDSIQSTSGFVVHLKDRSASA QRVRTAHAASAMQATSTSLRGLVDRAAKVRGAHVTESLARANNSMSVQVSQGLNATAAKA FASEIERNPEVESVEPVLHMTINENTGVHPAAVSSAPNDQYWNRQWGLNSENGIDAPGAW ATNTGSGVTVAVIDSGITKHPDLDGKVLPGYDFISDRYAAGDGNGRDSDPSDEGDWTRAG ACTRRDVPSSWHGTHVAGIIGAATNNARGVAGAAPGAKILPVRALGHCGGTDVDIADGIT WASGGEVPGVPTNHNPAKVINLSLGGPSNYCPITYQRAIDAAVSRGSTVVVAAGNEAMDV RKSTPGNCRNVVVVGATGETGAQSYFSNYGSTVDVSAPGGDDRTGDMILSTLNNGETTPA APTYGYMEGTSQAAPHVSAVVALMIAANPNLTPARIKEILKQSVNPAKCKTGCGTGIVDA RKAVKAAKSA >gi|302034473|gb|GL383162.1| GENE 716 716050 - 717096 872 348 aa, chain - ## HITS:1 COG:Cgl1491 KEGG:ns NR:ns ## COG: Cgl1491 COG1703 # Protein_GI_number: 19552741 # Func_class: E Amino acid transport and metabolism # Function: Putative periplasmic protein kinase ArgK and related GTPases of G3E family # Organism: Corynebacterium glutamicum # 9 333 40 363 363 314 51.0 2e-85 MKEMVIMPIDVPELVEQVLAGSRQHIARALTLVESSKPAHREMAREMLRQLAPRTGDAIR VGISGVPGAGKSTFINAVGGRLIDEFGYKVAVLAVDPSSTRTGGSILGDRTRMGDLANRD EAFVRPSPSGGHLGGVARATRESMIVMEAAGYNVVLVETVGVGQSEVAVAGMVDTFLMLS VAGTGDQLQGIKKGILELADVVAVNKADGDNAGNARVSARDLSIAMKLVSSDADKRRVPV LTCSSYTKEGLDDVWQAIVDHRAYLEKDGSLQIRRTEQQREWLWNMVRNEILESLDTDPS VQQTAERIEAGLGIEATSALEGAEEILRAFARAVPSLPWAQGELTSGS >gi|302034473|gb|GL383162.1| GENE 717 717250 - 719439 2132 729 aa, chain - ## HITS:1 COG:Rv1493_1 KEGG:ns NR:ns ## COG: Rv1493_1 COG1884 # Protein_GI_number: 15608631 # Func_class: I Lipid transport and metabolism # Function: Methylmalonyl-CoA mutase, N-terminal domain/subunit # Organism: Mycobacterium tuberculosis H37Rv # 34 598 46 617 617 788 70.0 0 MTTLPRFDSINLGDSSVPADAQEQFARLAAAAGEQEPWTTPEQIPVGHLYSEDVYGDMDW LDTYAGLPPFTHGPYATMYAFRPWTIRQYAGFSTAKESNAFYRRNLAAGQKGLSVAFDLP THRGYDSDNPRVPGDVGMAGVAVDSILDMRELFAGIPLDRMSVSMTMNGAVLPILALYVV TAEEQGAKPEQLAGTIQNDILKEFMVRNTYIYPPLPSMRIISDIFAYTSANMPKWNSISI SGYHMQEAGATADIEMAYTLADGVDYIRAGESVGLQVDQFAPRLSFFWAIGTNFFMEVAK MRAARMLWAKLVHQFNPKNPKSMSLRTHSQTSGWSLTAQDVYNNVIRTCVEAMGATQGHT QSLHTNSLDEAIALPTDFSARIARNTQLFIQQESGTCRVIDPWSGSAYVEKLTLELARKA WAHIQEVEKAGGMAKAIEKGIPKMRIEEAAARTQARIDSGRQPLIGVNKYRLDEEEPLEV LKVDNTQVLKEQKAKLEQLRANRDEEACQAALEKITWAAANPDPSDPDRNLLKLCIDAGR ADASVGEMSDAMEKVFGRYTAQIRTIEGVYSKAAGNSESTKKVHELIKQFEEKEGRRPRI MIAKMGQDGHDRGQKVVATAYADLGMDVDVGPLFQTPEETARQAVEGDVHVVGVSSLAAG HLTLVPALRKELDKLGRSDIMIVVGGVIPTQDFDELRKDGAAAIYPPGTVIPDAAVELME KLLAAHNDD >gi|302034473|gb|GL383162.1| GENE 718 719436 - 721346 1860 636 aa, chain - ## HITS:1 COG:ML1800_1 KEGG:ns NR:ns ## COG: ML1800_1 COG1884 # Protein_GI_number: 15827959 # Func_class: I Lipid transport and metabolism # Function: Methylmalonyl-CoA mutase, N-terminal domain/subunit # Organism: Mycobacterium leprae # 33 467 17 462 483 208 35.0 2e-53 MTDPDNLASKSVEDRMPEELSLAGDFPKVTHEQWEEAVLKVLNRGRPEGKELNIEQGMKR LEPTTVDGIQIEPMYRRQDAPEKLGVPGVPPFTRGTTIREGGMDAWDVRALHEDPDVAFT KKAVIADLERGVTSLWLRVGADAIKPEDIAGDLKDVLLDLAKVEVSSRDDQEAAAQALLD VYIESKIDADKLSFNLGLDPIGFAALNGGNPDLSGMAEWVKKTENYKNSRPFVVDATIYH NAGAGDVHELAWAVATGVEYVRAFIEQGLTAEQAFDSINFRVTATHDEFLTISRLRALRT LWNRVGEVFEVPAAKRGARQEAVTSWRELTRDDPYVNILRGTIATFGAAVGGAEAVTTLP FDAAIGLPKSDFSRRIARNTGIILAEESNIGRANDPAGGSFYVEALTKKLEDAGWAEFQA VEAAGGMAAALTGDHVRTELDKLNTERAKRLATRKQPITAVSEFPLLDAKSVETKPYPAA PAREGLEWHRDAEVFEALVDRSATCPERPKVFLACLGTRRDFGPREGFSAPVWHIAGMET PECEGGTTEEVVKAFKESGADIADLCSNAKTYAAQGLEVAKALKEAGAKLVYLSGAFKEF GDDAAEAEKVIDGRIYLGMDVVDVLTATLDTLGVAK >gi|302034473|gb|GL383162.1| GENE 719 721562 - 721762 59 66 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVMSFPLTAAGQFRSLTGFPLTASKSHEGFLGTSRYDTRPRTTTSVQRGHKCTIVHMQDE RPRSNC >gi|302034473|gb|GL383162.1| GENE 720 721780 - 721941 108 53 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MASRLLREVNSISCNAMIDLLVSGSAVNSGEANTSWAAGEWLVSTGVMSKAAN >gi|302034473|gb|GL383162.1| GENE 721 721892 - 722233 275 113 aa, chain + ## HITS:1 COG:lin1226 KEGG:ns NR:ns ## COG: lin1226 COG2267 # Protein_GI_number: 16800295 # Func_class: I Lipid transport and metabolism # Function: Lysophospholipase # Organism: Listeria innocua # 22 106 20 106 306 57 36.0 8e-09 MALQEIEFTSRNRRDAIQAWAYEPVGTPAAVVQIIHGLGEHSRRYLHMISALLDASFIVV ADDHAGHGRTAMQSGQWADAGDNSAEVVISDELTLQQQLTGHPGWSSVTVGVP >gi|302034473|gb|GL383162.1| GENE 722 722245 - 722817 396 190 aa, chain + ## HITS:1 COG:no KEGG:PPA0594 NR:ns ## KEGG: PPA0594 # Name: not_defined # Def: putative lysophospholipase (EC:3.1.1.5) # Organism: P.acnes # Pathway: Glycerophospholipid metabolism [PATH:pac00564] # 1 190 123 312 312 377 100.0 1e-103 MATRPNARLDGLALGGVVAQLRGLETTLDHEALAKAMATNPAGPAPESLVAQMFDGCTDR LSEGDGPTGWVARNRDVVADYGKDKFNNFGAQMSTRFLQGFADIYDMANGEGFYAAMPKI PIALFAGSEDPAGNFGTGVQAVAQRLRRDGHDVELHLYDGLRHEVHNEPESRADVESSLV TFVDRVAKRN >gi|302034473|gb|GL383162.1| GENE 723 722961 - 724127 1204 388 aa, chain + ## HITS:1 COG:ECs2829 KEGG:ns NR:ns ## COG: ECs2829 COG1004 # Protein_GI_number: 15832083 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted UDP-glucose 6-dehydrogenase # Organism: Escherichia coli O157:H7 # 1 388 1 388 388 512 63.0 1e-145 MKIAVAGLGYVGMANAVLLAQHNSVVAIDIDAERVDMVNNRHTTIVDPLIAEYLAHHNLD LRATTDPQEAYRGADFVVIATPTNYDPGQNYFDTSSVDEVLDLVQELAPHTTTVIKSTIP VGFVEGVRKERSGLDVIFSPEFLREGKALFDNLHPSRIVVGADSPKAHLFADLMAAGAVD TNVPVLFVGATEAEAIKLFANTYLAMRVSFFNELDTYASQRGLSTRQVIDGVCLDPRIGN HYNNPSFGYGGYCLPKDTRQLLANYQDVPQTLIQAIVDSNTVRKDFIASDIIARDPKRVG IFRLVMKAGSDNFRSSSIQGVMKRIKAKGIEVVVYEPTFDGDEFFHSEVTKNLAFFKANC DVIIANRMSPDLSDVADKVYTRDLFGGD >gi|302034473|gb|GL383162.1| GENE 724 724152 - 725387 792 411 aa, chain - ## HITS:1 COG:Cgl0864 KEGG:ns NR:ns ## COG: Cgl0864 COG0366 # Protein_GI_number: 19552114 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Corynebacterium glutamicum # 7 411 3 386 386 419 52.0 1e-117 MAYRPGWVDHLIGWHVYPLGFVGAPARLESQEVSHRLAHLGAWLDHAVALGCSSLALGPV FSSASHGYDTLDYFTIDPRLGDDDDFDHLLQAAHARGLSVLLDGVFNHVSRRNRIVQDAQ SAGPDLDAGRMVRWCAGRLDVFEGHSDLVALNHDNPAVREHVTRIMNYWCGRGVDGWRLD AAYSVNPEFWAAVLPSVREKYPDVWIFGEVIHGDYASIVRASGMDSVTQYELWKGIWSSI ESRNFFELDHALGRHNEFSDAFTPMTFVGNHDVTRIASRVGQDGAVLATAILATIGGIPL IYYGDELAYRGVKEERFGGDDDIRPVFPASPADLSNLGADTLRAHQSLLGLRRRHPWLVD ARTESLDLTNERYVYRTGVPGVEPLIVELDVRDGCSVLIREAGQVVWSSGA >gi|302034473|gb|GL383162.1| GENE 725 725432 - 726856 1074 474 aa, chain - ## HITS:1 COG:lin0791 KEGG:ns NR:ns ## COG: lin0791 COG0833 # Protein_GI_number: 16799865 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Listeria innocua # 3 460 7 472 486 541 59.0 1e-153 MDGELKRGLSSRHMNMIAIGGAIGTGLFVASGATISQAGPGGALVAYFAMGLMVFLLMQS LGEMSSYLPVPGAFETYATRFVSPSFGFALGWNYWFNWAITVAAELAAASIVMAYWWPGV PAWMWSVGFLALLFLLNVLSARAYGESEFWFAIIKVTAVIVFLVLGILMIAGVMGTSPGL SHWRRGDAPFVHGFGGILTVFLIAGFSFQGTELIGIAAGESKDPRMTIPKATRQIFWRIM IFYIGAIAVIGLLLPYTDPHLLAGEVTDVAVSPFTLVLKRAGVAAAAAVMNAVILTSVLS AGNSGLYASTRMLYALAREGKAPRILGRTSRRGVPVPALIVTTLVGAACFATSLVGSGQA YTWLVNISGLCGFIAWIGIAICHIQFRRAFQAQGHDLSELPYRARWYPAGPIVAGVLCVI VTLGQGRDAVLSGDVTDMIVAYISIPVFLALWVGHKIVTKAPHADLSTADLHHD >gi|302034473|gb|GL383162.1| GENE 726 727017 - 727520 449 167 aa, chain - ## HITS:1 COG:Cgl1062 KEGG:ns NR:ns ## COG: Cgl1062 COG2077 # Protein_GI_number: 19552312 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Corynebacterium glutamicum # 1 163 4 166 168 203 63.0 1e-52 MATTAFMGKPLNTVGDLPQVGSLLPSFALVKSDLSELRSDELKGKKLVLNIFPSVDTGVC ATSVRTFNEKAAGLDDTIVLCVSRDLPFAQARFCGAEGIKNVVVASAFRSHFGKDLGVTL ADGPMQHLLARAIIVVNAEGKVTYTQLVDEITTEPDYDAALEAASKA >gi|302034473|gb|GL383162.1| GENE 727 727573 - 728541 743 322 aa, chain - ## HITS:1 COG:Cgl0100 KEGG:ns NR:ns ## COG: Cgl0100 COG0667 # Protein_GI_number: 19551350 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Corynebacterium glutamicum # 1 320 5 315 315 249 43.0 6e-66 MTRIPGTDLDIRPLVLGANTFGWTADEHDSHAILDAFLGAGGSLVDTADGYSHWADGNNG GESERIIGSWLEQGGRRDDIVIATKVATHPEFKGLAPENISAAVDASLARLHTDHIDLYY AHFDDDTQQIEDMATAFDKLVKAGKVRWVGLSNFSVAREQKWLEVAEHEGLASPVALQPQ YNLLHRADVEDPQGYGQLASEYSLALLPYFSLASGFLTGKYATRNDLHGVTRESMMAAYL PDAEHEKAAFAVLDQLRQIAGDHRVEVTSVSLAWLLAKGVTAPIASARTIDQLDALLAAP DLVLSSDEVCALDEVSAVFAHE >gi|302034473|gb|GL383162.1| GENE 728 728567 - 729085 500 172 aa, chain - ## HITS:1 COG:PA0484 KEGG:ns NR:ns ## COG: PA0484 COG2716 # Protein_GI_number: 15595681 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system regulatory protein # Organism: Pseudomonas aeruginosa # 1 168 1 168 171 109 37.0 2e-24 MTQLLLTVVGADRSGLVSDLSEIVAHYDGNWLDSRMARLAGAFAGIVLVDIKSSKVEPLK ADLAGLEVKGLRVTVTDTTPQQDEGEAALVVHLVGHDHPGIIHKVTATMARLGVTIDDLS TGLREAPMGDGILFEAQVQCRITNATTLDDLRSELEAIATEIMVDIDLVDRS >gi|302034473|gb|GL383162.1| GENE 729 729109 - 729639 198 176 aa, chain - ## HITS:1 COG:Cgl2470 KEGG:ns NR:ns ## COG: Cgl2470 COG1990 # Protein_GI_number: 19553720 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 1 174 20 180 182 79 35.0 2e-15 MRQWSDKRIRKIVRRASGKRWDDVQVLDGVTISQDPPPYASPETGPARVRAFVPAPVHPQ PKQIDKLQVAGTNLPADGDSATTEPVVTIEINPRIEMTTGKACAQCGHAAQLAHEAMSFG NDDDRHTLETWRHDGFRVRVVTPTVEHWDSDVARVRVVDAGFTEFDGPTATTRARW >gi|302034473|gb|GL383162.1| GENE 730 729953 - 730357 164 134 aa, chain - ## HITS:1 COG:MT1695 KEGG:ns NR:ns ## COG: MT1695 COG1438 # Protein_GI_number: 15841113 # Func_class: K Transcription # Function: Arginine repressor # Organism: Mycobacterium tuberculosis CDC1551 # 1 122 51 171 201 79 40.0 2e-15 MSQGTLSRDLKDVGAARGRDQLGNFQYSIPEGEHPSQMTTGLPARNHLARMCHSLCIAVN YNNGAVVIKTPPGAAQYLGSAIDTSGVHTVLGTIAGDDTVLVVCKVGVEGEDLARLFREM AETGLPAKGLVAVN >gi|302034473|gb|GL383162.1| GENE 731 730633 - 731538 675 301 aa, chain - ## HITS:1 COG:HI0595 KEGG:ns NR:ns ## COG: HI0595 COG0549 # Protein_GI_number: 16272538 # Func_class: E Amino acid transport and metabolism # Function: Carbamate kinase # Organism: Haemophilus influenzae # 1 299 1 299 310 347 59.0 1e-95 MRILVALGGNALLRRGETMTAENQRANVRIAANHIKEVAVDHEVVVAHGNGPQVGLLALQ STAYEEVGIYPLDVLGAESQAMIGYMIEQELGNVMPQDQQIVTMITMTVVDADDPAFKHP TKPIGPVYDEATARRLAAEKGWTIAPDGEYYRRVVASPQPRNIIEQKAIRQLVDSGVMVV CAGGGGVPCVYDEDGILHGAEAVIDKDLASAELAVRVDADLLVIATDVAGVFRNWGEPDQ ERIEQMHASDALNTEFAAGSMGPKVKAACNFALATGKRAVIGSLEDIQGLVAGTHGTAII P >gi|302034473|gb|GL383162.1| GENE 732 731559 - 732563 836 334 aa, chain - ## HITS:1 COG:HI0596 KEGG:ns NR:ns ## COG: HI0596 COG0078 # Protein_GI_number: 16272539 # Func_class: E Amino acid transport and metabolism # Function: Ornithine carbamoyltransferase # Organism: Haemophilus influenzae # 1 334 1 334 334 520 73.0 1e-147 MAFNLKNRHLLSLAHHSTEEIKFLVGLAADLKEAKYCGTEQPLLKGKNIALIFEKASTRT RCAFEVAAHDQGAHVTYLGPSGSHIGHKESMKDTARVLGRMYDGIEYRGFHQSVVEELAE YAGVPVFNGLTDEFHPTQMLADALTMREHAEKPFHEIKFAYVGDGRNNMGRSLLLLGAKL GMDVRIGAPEGLQPEAELVERCREWAEQSGGKVLVTASAEEAVRDVDFIHTDVWVSMGEP VESWSERVGTLLPFQINDALVKAAGNPRVKVMHCLPAFHNSETAVGAEVAKTYPELANGI EVTESVFESPACIAFDQAENRMHTIKAVLVSSLA >gi|302034473|gb|GL383162.1| GENE 733 732637 - 733881 511 414 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149002994|ref|ZP_01827905.1| 50S ribosomal protein L33 [Streptococcus pneumoniae SP14-BS69] # 4 412 5 409 409 201 32 5e-50 MTTPIGAWSEVGKLREVMVCEPRLAHRRLTPSNCRELLFDDVLWVEKAQEDHRDFVAKMR ERGIVVHEMHQLLSEVLDISEGRSWVLDRKLSPNAVGLGVDEDVRDWLNDMPSDTLAEYL IGGVAYGEVPADRRKHVLGALIKAHSENEFLIPPLPNTQFTRDTTAWIFGGVTFNPMRWP ARQQETVLASAIYTHHPIFAERDFKIWYGCAEADHGMSTLEGGDIMPVGNGTVLIGMGER SSWQAITQVARSLFAQNAARRMVVAAMAPDRASMHLDTVFSFCDVDLVTLYKPVVDTITP LVLEPSSEAAGFSVRVDDRHFTDVVASSLGLDGLRTVETGGDCWEAQREQWDDGNNVVAL EPGVVVGYDRNTATNALLAKAGVEVVEIKAAELGRGRGGGHCMTCPITRDPVDY >gi|302034473|gb|GL383162.1| GENE 734 734012 - 735568 1269 518 aa, chain - ## HITS:1 COG:PA5170 KEGG:ns NR:ns ## COG: PA5170 COG0531 # Protein_GI_number: 15600363 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Pseudomonas aeruginosa # 48 517 8 482 482 404 54.0 1e-112 MVILGPGASPAGHRNNGVAKGYEVSMAEQVVGQASTEVSMGEDVNVGKLSFPAMLSLVVG SMIGGGIFSLPQNIAAAASPGPMVIGWTITGIGMICLAMVYQKLAIRRPDLDNGIYAYAK AGFGDFIGFNSAWGYWLSALIGNVGYLVLLFSTVGKFVPAFAGGNTVWAVLAASVLLWLT HALVLAGVRTAAFVNTIATIAKIVPLITFIAICAVAFDVGVFTEDFWGSHAGLGSVFAQT KSMMLVTVWVFIGIEGASIYSKRARKRSDVGKATVGGFLFVLVLLIGVNLLSMGIMHRAK LAGLPDASMGDVLSSVVGPWGSVLVSAGVIISLLGALLAWILLCGETMQVPGEDGTMPKL FGRINKHEAPAPALWITNIVSQICLVMTVLWDGAYLAMATLAAALILVPYLLSAAFALKM VIKGETYENGPRSQRVRDAVVATVATLYGIWLVVAAGADALMLAALLYLPGAAVFVWAKR ELRAKRIFKPYEIGVLVLLALISVVSIISIVTGRLSLT >gi|302034473|gb|GL383162.1| GENE 735 735561 - 735920 95 119 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTIGRIYSGRQLILNQHLAPYSINIETLFNNAKIHPSEGCFTPVPNQAPSESNDVLADLY SSESHPREPAIASRDAAGTPTRSLPPLRTHSSIEMNPIQPWIPITTALDSSTSNPSYET >gi|302034473|gb|GL383162.1| GENE 736 736284 - 736973 629 229 aa, chain - ## HITS:1 COG:SMb20212 KEGG:ns NR:ns ## COG: SMb20212 COG0693 # Protein_GI_number: 16263953 # Func_class: R General function prediction only # Function: Putative intracellular protease/amidase # Organism: Sinorhizobium meliloti # 3 225 4 225 226 247 58.0 1e-65 MSRILMILTSHNQLGDTGRKTGFWLEEFAAPYYVFCDAGHDVTLASPRGGQPPIDPTSSL PQMQTDATRRFDVDEQAKRALATTTPLSEVDIATFDAVFYPGGHGPLWDLADDPTSQQII LDSDAVGRPLGLVCHAPGVLHTVKKHDGTLFVTDRSVTGFTDGEEEAAGLTGVVPFLVED SLKQAGARYSKGPDGDSYVVTDKTLVTGQNPASSAATAQRLLDLLCVRV >gi|302034473|gb|GL383162.1| GENE 737 737093 - 737521 449 142 aa, chain - ## HITS:1 COG:Cgl0024 KEGG:ns NR:ns ## COG: Cgl0024 COG1764 # Protein_GI_number: 19551274 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Corynebacterium glutamicum # 8 142 35 170 172 162 64.0 1e-40 MIEIEPVYTTEAIATGAGRNGHVQSPDGRVSEDLAVPVEMGGSGKGTNPEQLFAAGYAAC FHSALQMVARQAKKDLGDSSVGARVSIGQAGEGFGLAVALEVVIPALPHDEAQRLADKAH QVCPYSNATRGNIRVDVTVVDD >gi|302034473|gb|GL383162.1| GENE 738 737546 - 738073 199 175 aa, chain + ## HITS:1 COG:CC0915 KEGG:ns NR:ns ## COG: CC0915 COG1846 # Protein_GI_number: 16125167 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Caulobacter vibrioides # 26 171 6 147 148 128 49.0 7e-30 MCADVSVVQRYKKHSAQLSCVQSCCASNILPVVHDQTLDLDDQFCFSLYRASRAVTRAYR PLLEGIGLTYPQYLAMLVLWHAEGPVGVNDIGTRLHLDSGTLTPLLRRLEDAGFITRAWS NDDERRRIISLTEGGRSLRHQAAGLPERMLALYPTPPQELAQVKAFLDDLATQLE >gi|302034473|gb|GL383162.1| GENE 739 738185 - 739366 711 393 aa, chain + ## HITS:1 COG:CC1133 KEGG:ns NR:ns ## COG: CC1133 COG0738 # Protein_GI_number: 16125385 # Func_class: G Carbohydrate transport and metabolism # Function: Fucose permease # Organism: Caulobacter vibrioides # 4 360 14 367 411 63 23.0 9e-10 MHMLLLAIIYLAFISLGLPDSLVGAGWPAMHESLGVPLSCAGFITFIIATGTIISSLMSD RLTTRFGPGRVTAASVALTAAALFGFSFSTQFWVLCLWAMPYGLGAGTVDAALNNYAALH YTARHMNWLHGCWGLGASISPFIMSQALSSGHGWPSAYRTVGTLQAILTAIVTVSLPLWN KTRKINGGGSAKLFDHVPTRAALATPGVPAVLGAFFSYCAVESTSMLWAASYLVSVRGTD GATAAAFASLFVLGITAGRFLAGFVAERIGDRMLVRGGFITVGVGVVLVGLPGVPSWVAL AGLVIAGLGSAPIYPAIIHSTPTTFGAHNSQAIIGIQMAAAYVVTTLAPPLFGAISANTG LWTLPLYLIVLVIFGLVMSEHVTRRERARAQDG >gi|302034473|gb|GL383162.1| GENE 740 739429 - 739896 464 155 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3637 NR:ns ## KEGG: HMPREF0675_3637 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 155 1 155 155 311 100.0 4e-84 MAVPVDFTTVSAQGLETSEHPEALAGLRANEARYFHNKFKHTFEVSPASEEPYALAWVTQ ILAEERDITIASPALEISINDVEGIHWVHVFYASGLAINVLWTVANSGKRAVGFKLCDGM DQPAELSAFKFARQRSKLAGTIRGSYFVIKGDYPY >gi|302034473|gb|GL383162.1| GENE 741 739974 - 740549 431 191 aa, chain - ## HITS:1 COG:no KEGG:PPA0576 NR:ns ## KEGG: PPA0576 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 191 55 245 245 385 98.0 1e-106 MPPEESETELPDSRGVIPPTALEAGEENNGFLNAFGMFWRRDEVDWDKCGQTLLGAQLKV AKPVNFSGQVGVYILYSGERVICVGRITEPRLGPRLWDHTRDRLAGRWDRFSWFGVLIAK DDGTLGDVPCGNFAVDMLVSTMEALLIEGLEPPQNRRRGDGFNATEFIQATDPEVERRRA KQLLFKLTDSK >gi|302034473|gb|GL383162.1| GENE 742 740842 - 741915 1064 357 aa, chain - ## HITS:1 COG:ML1936 KEGG:ns NR:ns ## COG: ML1936 COG0012 # Protein_GI_number: 15828041 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted GTPase, probable translation factor # Organism: Mycobacterium leprae # 1 354 1 354 356 422 61.0 1e-118 MALTIGIVGLPNAGKSTLFNALTKNDVLAANYPFATIEPNVGVVGVPDKRLDVLTEMFHS AKTIPATVSFVDIAGIVKGASKGEGMGNEFLSNIREADAICQVTRCFADDDVTHVNGHVD PSDDIETITTELVLADLQTMEKQLPKLQKEAAIKKESRPKVEAWEQAKAVLEEGKTIFSA GLDPEPLHDLFLLTTKPFIYVFNCDQDQLADADFQAKMEKLVAPAEAIFLDAEFEAELAE MEPEDAAEFLADAGIEEPGLDKLARVGFDTLGLQTFLTAGEKESRAWTIHKGDTAPEAAG VIHTDFQKGFIKAQVVSFGDLVEFGGEKEAQAAGKLRLEGKEYVMQDGDVAEFRFNV >gi|302034473|gb|GL383162.1| GENE 743 742064 - 743350 851 428 aa, chain - ## HITS:1 COG:Cgl1463 KEGG:ns NR:ns ## COG: Cgl1463 COG1362 # Protein_GI_number: 19552713 # Func_class: E Amino acid transport and metabolism # Function: Aspartyl aminopeptidase # Organism: Corynebacterium glutamicum # 17 424 6 417 420 441 52.0 1e-123 MVVMADKSVPTSDHIRDIISFVEASPTSYHAVVELTRRLEQAGFQRLEETESWPSVEGRR YVVRDGAVIAWITPEKVTPQLGARIVGSHTDSPSFKLKPNATVTNQGWQQVGMEVYGGGL LNSWLDRDLGLSGRLVTCDGQAHLVRTGPILRISQLAPHLDRTVNDDLKLDRQRHLMPIL SVGKPDLDVEDLLCEAAGIKRDELAFHDVFAHLTQSPAVIGPYGEFLASQRMDNLSSVHS SVAAFVDVKPTSDVAVMACFDHEEVGSATRSGACGPFLEDVLVRIAEGFGMTGAAYRAMI AKSSCVSSDAGHGVHPNYVEKFDPANHPLLNEGPLLKINAHQRYATDGVGGALWQRACAA AGVPTQNFVSNNSVPCGSTIGPLTATRLGMLTVDVGVPLMSMHSTRELAGTADLTYLSKA LGAYWAGA >gi|302034473|gb|GL383162.1| GENE 744 743429 - 744649 746 406 aa, chain + ## HITS:1 COG:CPn0982 KEGG:ns NR:ns ## COG: CPn0982 COG1322 # Protein_GI_number: 15618890 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Chlamydophila pneumoniae CWL029 # 63 384 71 385 411 197 34.0 4e-50 MTNIVVGLIGLAIGVALGWLIAQLRTSQRIAEATSAARVATERLEAAEKIATDRDALATL FKALSAQSMADQNERATQSAQRTMSDAQRLLAPVSLALERLDRRLAEVEQERTDMTASLR EQVAGVSTAGESLRKETASLVAALRKPQIRGAWGEMQLQRTAEVAGMLEHCDFQTQQTTT AQGAPQRPDMTVKLSGRRCIHVDAKTPLAAFLEAAQCDDAEEYDAQMARFARHVRTHIDQ LSAKGYWRTDLDSPEFVVCFLPSDALLQAALQEIPDLHEYANRRGIVLASPSVLIPMLRT VALAWRQEAVARSATEVAALGRDLHKRLGTLAGNLDKMGRSLTSTVRAYNSALGSLETRV LVQARRFEHLGVTADDIASPAPIEEAVRPLTSPELTENQTEVGLPE >gi|302034473|gb|GL383162.1| GENE 745 744653 - 745624 403 323 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229229955|ref|ZP_04354520.1| SSU ribosomal protein S1P; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Desulfotomaculum acetoxidans DSM 771] # 11 285 2 270 676 159 32 2e-37 MAVTGACTNKKLYLAAPRGYCAGVDRAVVTVEKALEVYGAPVYVRKQIVHNRHVVETLEG RGAIFVDELDEVPDDALVVFSAHGVSPQVKKEATDRGLRTIDATCPLVTKVHHEAKRFAN QDTQILLIGHAGHEEVEGTTGEAPENITLVQTPADVDGLALDRDRPVAWLSQTTLSVDET VETVDRIRDLHPQLIDPPSDDICYATQNRQHAVKQMAPQCDLVIVVGSKNSSNTGRLVEV ALESGAKASYRVDNAGEIEETWLDGVSTIGVTSGASVPEALVQGVIDLLISKGWPPAEEE TLIEESLSFALPPQLRKRRTTAK >gi|302034473|gb|GL383162.1| GENE 746 745906 - 748551 1807 881 aa, chain + ## HITS:1 COG:alr1386 KEGG:ns NR:ns ## COG: alr1386 COG3391 # Protein_GI_number: 17228881 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Nostoc sp. PCC 7120 # 31 783 85 982 1001 327 30.0 6e-89 MSGSTGRTTVGQLLTPAGQLTTLGDLPLNEALSPDGRYLIVSNNGQGTQSLQVIKTATGK VVQTIPYKSPESLYMGLAFSPDGTHLFASAAGNHKIRTYHFDCGKLVETSAIQMPVVSPK LTKVNLYPAGLAVTNDSKRLVVADQLADAVSVIDLATNKIQTTHIGHRPVWVTLSKDSTK AFVSSQGGADVAEVDITKSQPLATHKINVGFHPNKSVLTPDGKSLYVANGDADTISVVDV ASHRQTATIPVNRNGSKLVGANPTGLALSQDGKRLYVTNSGHNEVAVINAATRKVIGDIP TGWYPTQVLAHDGKLSITSAKGLGAGPNNGPGHPNPTDPRDTAENQYSGSMIKGLLSTVS EPDAATLAKLTATVEKNNTANDPARSSAVPNQIGTTSSKIKHVIYIVRENRTFDQELGSN GRGNADPSLNLFGEESAPNTRALARQFTTFDNFYADAEVSANGWNWVSQANSNPWSEEMW PSNYSGRGAPYPAESNDPDSRAKEHDSYFWEHLSKNNISFRNYGFYTTLDKKGKAHGVDK KILDPNTDHDFIGWSLDCPDSARSFAPMAKNCGPKSRVDEWKSDFNKQLAKGSVPTVQLV RFGNDHTQATKVGVPTPQAYVADNDQAIGQLVETVSHSPIWKDTAIFLTEDDAQNGPDHV DAHRTIGEVISPYTRTGGVDSTFYSTVSMLHTMEGILGIGPLTQFDAFSTPMSAAFTDKP DLTPYQAASPSYDMKTLNTPKAPMAKESGEQDTTKEDDIDEQVFNKAIWKAVKGARSTMP EPKHSVIQSGPVLTYDDDDDEGEKLKPGDVDLDELGSYSKDAKGFPVWTPDDKRFDPAQG IDPCSPKPGPTLTPTVPTAVMPSNSTHRGEGRHPGLPRTGV >gi|302034473|gb|GL383162.1| GENE 747 748632 - 749879 726 415 aa, chain + ## HITS:1 COG:MT1139 KEGG:ns NR:ns ## COG: MT1139 COG1570 # Protein_GI_number: 15840545 # Func_class: L Replication, recombination and repair # Function: Exonuclease VII, large subunit # Organism: Mycobacterium tuberculosis CDC1551 # 5 395 4 405 415 306 45.0 4e-83 MVEPNAADNPRSLAWVVNAVKGWVERCGAIWVQAQVIEITRRSSPTQFLTLRDPIEEISA SATCHRRVLDAAGPIETGMTVTALIRPTVWSRTGRLSFEISEITPTGEGQLLAQLERRKR LLEAEGLFDVTLHRPIPVLPRGIGLITGAGSDAERDVQRHATLRWPAARFVVHNTRVQGP MAAQQIIAALADLDADPTVDVIVIARGGGPLEDLLPFSDEALVRAVYATRTPVVSAIGHD RDNPILDLVADLRASTPTDAGKLIVPDAAEQSQAIETARAQLRQAVTRFIDVESGHLSQI RSRPVMVNPAATLDIAVERLDSTLQRLRLATHRVLDAESRDVNHMLERVRAMSPKATLDR GYAILADTEGDSITSVNDTNARANLLVYLSDGTLSVTVDSLDRRTPNRPTFQEDS >gi|302034473|gb|GL383162.1| GENE 748 749876 - 750112 262 78 aa, chain + ## HITS:1 COG:ML1941 KEGG:ns NR:ns ## COG: ML1941 COG1722 # Protein_GI_number: 15828046 # Func_class: L Replication, recombination and repair # Function: Exonuclease VII small subunit # Organism: Mycobacterium leprae # 1 66 10 75 87 59 48.0 2e-09 MTDTTPNSAPEEPEITYEAARDELVEIVTRLESGGISLAETMTLWERGEKLADICQSWLN GARARIEAARSDAETAQP >gi|302034473|gb|GL383162.1| GENE 749 750139 - 750654 246 171 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3627 NR:ns ## KEGG: HMPREF0675_3627 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 171 21 191 191 323 100.0 1e-87 MLLSLAIILVPVMLIVWFFTRTPDEPNIQQVDWKPVVASARSRAGYPVLAPKEVPEVWRP TKARYANKGDRWVGNTISAGDRWELGFLTSKNVYLAVDQSDEPGRAFVASVTRSATEDGK VSVGRYIWTKMVSPDDRTHALVTKIGSATAVVVADTDYRVLTDFAGMLTTS >gi|302034473|gb|GL383162.1| GENE 750 750734 - 752113 935 459 aa, chain - ## HITS:1 COG:Cgl0065 KEGG:ns NR:ns ## COG: Cgl0065 COG1875 # Protein_GI_number: 19551315 # Func_class: T Signal transduction mechanisms # Function: Predicted ATPase related to phosphate starvation-inducible protein PhoH # Organism: Corynebacterium glutamicum # 28 455 27 454 458 545 65.0 1e-155 MRPLTSREVFVSVRPEGSERAHSLIPEAPEGRRTYVLDTSVLLSDPRALLNFAEHEVVVP IVVITELEGKRHHPELGHFARAALRILDRLRLENGGLVGPVPVNNEGGVLLVELNHSDPL CLPDGFRLGDNDTRILAVAQSYRLAGHSVVLVTKDLPLRVKASAIGLEAEEYRHELVPSS GWTGMVNLEVPDEMISTLYEEGSVVDSIFDEIPVHAGLVLEGPNGTALARRMSDASARLV PNDQEAFGIRGRSAEQRIALDILLDPQVGIVSMGGRAGTGKSALALCAGLEAVMERQLHK KVMVFRPLYAVGGQDLGYLPGDEGDKMAPWGQAVLDTLTSVTNNYVIEEVMSRGMLEILP LTHIRGRSLHDAFVIVDEAQSLERNVLLTVLSRIGQNSRVVLTHDVAQRDNLRVGRYDGV AAVVERLRGHDLFGHVTLTRSERSPIAALVTSMMEDMVG >gi|302034473|gb|GL383162.1| GENE 751 752230 - 752901 626 223 aa, chain - ## HITS:1 COG:MT1117 KEGG:ns NR:ns ## COG: MT1117 COG1272 # Protein_GI_number: 15840522 # Func_class: R General function prediction only # Function: Predicted membrane protein, hemolysin III homolog # Organism: Mycobacterium tuberculosis CDC1551 # 13 222 28 241 242 140 38.0 3e-33 MATGCSSKTKNRSSVLPKPRLRGWVHTVMAPLILLAGVGLMIATPTWGNRFAVGVWMLTG LELFGNSAVYHRVPWGAKVKDVLRRIDHANIAVFIAGTYTPLAVSLATGASRVILLAIIW ACALLGVAFRFVWNGVPRWASTILYVVMGWTALWWLPQFWRTCGPAVVILILIGGVFYTV GAISYARQKPNPSPTWFGFHEVFHSCTAVAAICHAVAIGLAVI >gi|302034473|gb|GL383162.1| GENE 752 753046 - 753867 661 273 aa, chain + ## HITS:1 COG:ML2467 KEGG:ns NR:ns ## COG: ML2467 COG0020 # Protein_GI_number: 15828335 # Func_class: I Lipid transport and metabolism # Function: Undecaprenyl pyrophosphate synthase # Organism: Mycobacterium leprae # 24 273 12 262 262 234 49.0 9e-62 MSSLDHRLSKVSETLDRMHPSGLLYTTYEARLLDQLDRSRLPQHVAVLADGNRRWARLNA PGEPLVAGYEAGADRLREFCTWCDAVGIPIITLWVLSTDNLQRAETGELGPLLKVIESLV DSLADNSRWRVQAVGDLDLLPDDMAESLCRAGRTSIGHVGMHINVAVAYGGRHELRDAFR SLLAEEAEKGTSLADLARTLEIDQIEDHLYTRGQPDPDLIIRTSGEQRLSGFLMWQSAHS EFYFCEALWPDFRKVDFLRALRSFTQRERRYGR >gi|302034473|gb|GL383162.1| GENE 753 753889 - 755904 1481 671 aa, chain - ## HITS:1 COG:BS_yyaL KEGG:ns NR:ns ## COG: BS_yyaL COG1331 # Protein_GI_number: 16081134 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Highly conserved protein containing a thioredoxin domain # Organism: Bacillus subtilis # 2 659 7 676 689 370 32.0 1e-102 MPNYLGESTSPYLIQHAANPVDWFPWGEEAFDEARSRDVPVMVSVGYSSCHWCHVMALES FSDPEVAEVVNANVVPVKVDREERPEVDAALMQVTLAMTGQGGWPNTVFLTPEGKPFFAG TYFPPVRRGRLPGFVELVEALGGAWRERRDEVVSSAEAIVEHLRPVEKDPEVARPIAGEL IDAVGADYDIVHGGFGSPTKFPMPTLLDALLVKGDPTSLDMAQNTCEHLVRGGIFDQVGG GFHRYSTDSQWVVPHFEKMLYDNALLLATMARCWRRTADHDSDRRDLYSHAARRTVAWLN REMRLPNGLYAAGLDADSDDAAGHTHEGIYYLWNQDLITDALGTDEAEWLRPLVHLEPCN DNGLGTLQLRGRVEWERINADMDTLLEARGRRSAPARDEKAITAWNAMLIDGLVEAGMIL REWSWVEQARELADSLWTAHWDHGMALRTSFHDRPGVPAVCEDYAWVALSFAGLAGATGE SVWLDHAVEVLGEAVARFSAVDGSFLDAEDSFLLTVTAHTLTDDACPSPTAAMVMALRRV GLMAERADFIERANKASVALLPVVSATPRFAGWAVADFLITDEARRGLKPAGVVIADTTD EPSDLAAAAWRMAPAGSAIMRRLNEDSGFGTWFNERVPRDGQPTCWVCRGAVCFEPVTDY LDLKEPLWRRA >gi|302034473|gb|GL383162.1| GENE 754 755857 - 756012 72 51 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLDKVRAGGLAKVIRHSSQPTRTTPFSTTGQPGLGGVPSIEAQMPRFASSL >gi|302034473|gb|GL383162.1| GENE 755 755982 - 756173 185 63 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|289425798|ref|ZP_06427552.1| ## NR: gi|289425798|ref|ZP_06427552.1| hypothetical protein HMPREF1034_1139 [Propionibacterium acnes SK187] hypothetical protein HMPREF1034_1139 [Propionibacterium acnes SK187] hypothetical protein HMPREF9567_01808 [Propionibacterium acnes HL013PA1] hypothetical protein HMPREF9574_02176 [Propionibacterium acnes HL074PA1] hypothetical protein HMPREF9575_02638 [Propionibacterium acnes HL110PA1] hypothetical protein HMPREF9576_01196 [Propionibacterium acnes HL110PA2] hypothetical protein HMPREF9580_00569 [Propionibacterium acnes HL087PA2] hypothetical protein HMPREF9585_00876 [Propionibacterium acnes HL083PA1] hypothetical protein HMPREF9587_02235 [Propionibacterium acnes HL025PA1] hypothetical protein HMPREF9589_02265 [Propionibacterium acnes HL059PA1] hypothetical protein HMPREF9593_00751 [Propionibacterium acnes HL046PA2] hypothetical protein HMPREF9604_01446 [Propionibacterium acnes HL036PA1] hypothetical protein HMPREF9605_02462 [Propionibacterium acnes HL036PA2] hypothetical protein HMPREF9611_01448 [Propionibacterium acnes HL063PA1] hypothetical protein HMPREF9612_01710 [Propionibacterium acnes HL063PA2] hypothetical protein HMPREF9616_01550 [Propionibacterium acnes HL007PA1] hypothetical protein HMPREF9617_01652 [Propionibacterium acnes HL056PA1] hypothetical protein HMPREF9591_01344 [Propionibacterium acnes HL086PA1] hypothetical protein HMPREF9597_01930 [Propionibacterium acnes HL005PA4] hypothetical protein HMPREF9598_00729 [Propionibacterium acnes HL050PA1] hypothetical protein HMPREF9600_01420 [Propionibacterium acnes HL050PA3] hypothetical protein HMPREF9603_01762 [Propionibacterium acnes HL001PA1] hypothetical protein HMPREF9606_01421 [Propionibacterium acnes HL036PA3] hypothetical protein HMPREF9608_00280 [Propionibacterium acnes HL067PA1] hypothetical protein HMPREF9609_02424 [Propionibacterium acnes HL027PA1] hypothetical protein HMPREF9613_01107 [Propionibacterium acnes HL002PA1] hypothetical protein HMPREF9614_02579 [Propionibacterium acnes HL002PA2] hypothetical protein HMPREF9618_02635 [Propionibacterium acnes HL082PA1] hypothetical protein HMPREF9619_01189 [Propionibacterium acnes HL082PA2] hypothetical protein HMPREF9620_01659 [Propionibacterium acnes HL037PA1] hypothetical protein HMPREF9564_01571 [Propionibacterium acnes HL053PA1] hypothetical protein HMPREF9566_01556 [Propionibacterium acnes HL045PA1] hypothetical protein HMPREF9573_01552 [Propionibacterium acnes HL072PA2] hypothetical protein HMPREF9577_02545 [Propionibacterium acnes HL110PA3] hypothetical protein HMPREF9594_02671 [Propionibacterium acnes HL005PA1] hypothetical protein HMPREF9595_01827 [Propionibacterium acnes HL005PA2] hypothetical protein HMPREF9596_01691 [Propionibacterium acnes HL005PA3] hypothetical protein HMPREF9565_02420 [Propionibacterium acnes HL053PA2] hypothetical protein HMPREF9569_02435 [Propionibacterium acnes HL078PA1] hypothetical protein HMPREF9610_01091 [Propionibacterium acnes HL027PA2] hypothetical protein HMPREF9615_02443 [Propionibacterium acnes HL002PA3] hypothetical protein HMPREF9572_00461 [Propionibacterium acnes HL072PA1] hypothetical protein HMPREF9578_02535 [Propionibacterium acnes HL110PA4] hypothetical protein HMPREF9582_02576 [Propionibacterium acnes HL060PA1] hypothetical protein HMPREF9583_01150 [Propionibacterium acnes HL038PA1] hypothetical protein HMPREF9590_00259 [Propionibacterium acnes HL059PA2] hypothetical protein HMPREF9592_01899 [Propionibacterium acnes HL046PA1] hypothetical protein HMPREF9601_00485 [Propionibacterium acnes HL030PA1] hypothetical protein HMPREF9602_01734 [Propionibacterium acnes HL030PA2] acetyltransferase, GNAT family [Propionibacterium acnes HL096PA2] acetyltransferase, GNAT family [Propionibacterium acnes HL103PA1] acetyltransferase, GNAT family [Propionibacterium acnes HL096PA3] acetyltransferase, GNAT family [Propionibacterium acnes HL097PA1] hypothetical protein HMPREF9570_02559 [Propionibacterium acnes HL043PA1] hypothetical protein HMPREF9571_02162 [Propionibacterium acnes HL043PA2] hypothetical protein HMPREF9568_00851 [Propionibacterium acnes HL013PA2] hypothetical protein HMPREF9581_02605 [Propionibacterium acnes HL087PA3] hypothetical protein HMPREF9584_01071 [Propionibacterium acnes HL092PA1] hypothetical protein HMPREF9586_01322 [Propionibacterium acnes HL083PA2] hypothetical protein HMPREF9563_02300 [Propionibacterium acnes HL020PA1] hypothetical protein HMPREF9579_02366 [Propionibacterium acnes HL087PA1] hypothetical protein HMPREF9588_00098 [Propionibacterium acnes HL025PA2] acetyltransferase, GNAT family [Propionibacterium acnes HL099PA1] # 1 63 1 63 63 127 100.0 3e-28 MTVLAAQLVSTGLANFLCCLVLAVFGVVAWISIRHNIRGIDFDEVPCGPALKESHREDAN RGI >gi|302034473|gb|GL383162.1| GENE 756 756200 - 756625 237 141 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3622 NR:ns ## KEGG: HMPREF0675_3622 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 141 1 141 141 262 100.0 4e-69 MGHVPTPDHSLTDEARERIANRYPSPRRAPWVVLIIVLAVILIGWTVWTGLYHADQPIRA SLHGYQAVSDSRVDVTIKLHRPDPSVAGSCTLVATGADHVRVGETTVTFPASSSQDETIR ASVKTFSRAVTADLEKCGPIR >gi|302034473|gb|GL383162.1| GENE 757 756647 - 757153 618 168 aa, chain + ## HITS:1 COG:ML2393 KEGG:ns NR:ns ## COG: ML2393 COG0782 # Protein_GI_number: 15828286 # Func_class: K Transcription # Function: Transcription elongation factor # Organism: Mycobacterium leprae # 9 166 8 162 164 150 54.0 1e-36 MPESEDTVWLTQEAFDKLTQELEYLKGEGRTAIANKIADARSEGDLSENGGYHAAREEQG QAEARIRQLEQMLRNAEVGEAPSSPDEVVPGSKVTVCYFDDESDTDTFLLGSRQVMGLDD SVNVSVYSPQSPLGGAILGHSKGESTEYQAPNGKTIKVTILNVEPFEE >gi|302034473|gb|GL383162.1| GENE 758 757258 - 758241 619 327 aa, chain - ## HITS:1 COG:no KEGG:PPA0560 NR:ns ## KEGG: PPA0560 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 327 1 327 327 548 99.0 1e-155 MSADITAILEDLAAGRIDTAEASRRIAAAGQDQPTSGVTSGPDCGPGPRHGASEDDAPGA DSSSLGGFTIPSEAKEGLRSAWRVVSGMAESVGETVASTVSSGSRRASGGNDSERSVDMT TDLDRVRINCSGRRIRLIGDRSIPGVQIGGKHTRRRIGRVVEIGIDGHLAPDLGVLKRFR FPTGMDGVKDLSFGREVTVRVHPDLPVDIELSGGSLRASGVERFGRVRVTAGVTEIDGVH QIEDGLFQAGSGSITGRIDTGRSQIRVESGNLNIKLAGGSNVSVRGKAQTGMISWPEGGE VDEYVMGNGSARLDLTCLVGRIAVRAL >gi|302034473|gb|GL383162.1| GENE 759 758279 - 759505 1125 408 aa, chain - ## HITS:1 COG:MT0215 KEGG:ns NR:ns ## COG: MT0215 COG0628 # Protein_GI_number: 15839585 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Mycobacterium tuberculosis CDC1551 # 54 400 14 363 367 171 34.0 2e-42 MKLFSSGRKTPTSSPASSHAGAMDETVGVTSTSEAANVATQPVPTPVEDVPNGVRTAAGW CWRMIVIAAFIYGLYQVLHAASEVSVPVAVALMLTAAMWPLANWLSRHHIHRGIASGICL LLLVILVGGVFTLVGAQIALQWRQLGDQSVASFKQALQWLAKSPLHTNEAQLTHLMQKAE AAMAGSQGRIASTAAAAGSQIGRFGAGLVMALFATFFFVYEGDKLAEKSAVLIPREHRAA ILDAAKRGWVALVAYVRAAVIVAFVDGLGAGIGAAIIGSSMSVAIGALTFILAFVPIVGA LTAGVVAVGVVLVTLGFFKAFIMLIVFVAVMQIEGHVLQPFLLGKAVSIHPLIVLLGIAV GAIISGIVGALFAIPIVAFGVAFIKALNPETPANEVPPNHDDLAAEHT >gi|302034473|gb|GL383162.1| GENE 760 759574 - 760290 304 238 aa, chain + ## HITS:1 COG:ML1675 KEGG:ns NR:ns ## COG: ML1675 COG0692 # Protein_GI_number: 15827886 # Func_class: L Replication, recombination and repair # Function: Uracil DNA glycosylase # Organism: Mycobacterium leprae # 12 235 1 226 227 267 62.0 1e-71 MSSVCILLEATVVAHPVAELVTPDWAEALTGVEPRIHEMGDFLRAETAAGRGFLPHGDRI LRAFSRPMADVRVLIVGQDPYPTPGHPVGLSFSVERDVRPLPRSLQNIYTELQSDLGIAP CEHGDLTGWFEQGVLLLNRCLTVQPGRPASHRGKGWEEVTQTAIEALVARGGPLVAILWG RDAQSLEPMLGKVPIVKSSHPSPMSARYGFFGSRPFSRTNELLVQQGADPINWDLSSH >gi|302034473|gb|GL383162.1| GENE 761 760318 - 760422 77 34 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSTSAIIMMISAMVTVWGGLAASAISLFRHPEQD >gi|302034473|gb|GL383162.1| GENE 762 760419 - 762038 1202 539 aa, chain - ## HITS:1 COG:PM0718 KEGG:ns NR:ns ## COG: PM0718 COG0733 # Protein_GI_number: 15602583 # Func_class: R General function prediction only # Function: Na+-dependent transporters of the SNF family # Organism: Pasteurella multocida # 18 511 2 493 502 516 60.0 1e-146 MSDPAQSGATVAGGGRATRKPQRRESFAGRGAFLIAAIGSAVGLGNIWRFPYVAYSNGGG AFIVPYLVALLTAGIPLLFLDYAVGHKFRGSPPMALRRLHRRMEAIGWWQTLICWVIVIY YAVIIAWAIRYVGFSVTKTWGHDPEGFLTGSFLHVASNVDVEFHFVSGVFWPLLLLWLFV LAIMATGVEKGITRASWIFMPLLAVMFITLVIVALTLDGASVGLNALFTPSWGALGNYRV WMAAYGQIFFSLSVGFGIMVTYASYLKPKSDLTGSGLVVGFANSSFEILAGLGVFAALGF MATASGKPVSEVAGSGIGLAFIAFPQIISQAGAVGPILGVLFFVSLVFAGITSMISLLEV VIAAFREKTGISRKAATWIIGGVTAIASIVLFPTTTGLNLLDVTDHFINNIGIVGVALLA CLVISWALRKLPVLRDHLNEYSSFQVNKVWMALVSVVAPLVLLSLWITEIITVASKGYGE MPRNFVGIFGWGMSILLVVLAIVLSLIPWPHRSAIHHELTHEEELACENFQETEEGALS >gi|302034473|gb|GL383162.1| GENE 763 762195 - 762827 623 210 aa, chain + ## HITS:1 COG:AGc197 KEGG:ns NR:ns ## COG: AGc197 COG0225 # Protein_GI_number: 15887479 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptide methionine sulfoxide reductase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 3 205 22 223 228 204 56.0 8e-53 MNKTEMVSSENALPGGHTPVLAMPFFHRVTGDRLDRPFPSSETIYLAMGCFWGAEKLFWN TDGVLQTAVGYMGGLTPNPTYREVYTGCTGHAETVRVTYDPTQVSTEAILTIFLENHDPT QGMRQGNDVGTQYRSAIWCTTTEQFMTATTVKGSYQANLLNAGYGAITTAISMANGVEFY LAEAEHQQYLEDNPFGYCPVHATGVCLAGS >gi|302034473|gb|GL383162.1| GENE 764 762943 - 763806 761 287 aa, chain + ## HITS:1 COG:all2316 KEGG:ns NR:ns ## COG: all2316 COG0667 # Protein_GI_number: 17229808 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Nostoc sp. PCC 7120 # 12 286 14 284 284 177 37.0 2e-44 MKYRQIGPFRTSAIAYGSMPLSIEGRPDRETAINILHDVLDAGCTHIDTAWAYYESGGVE QYGERLVTDALASWDGDHSTISVATKVGHFRCFNDAGQPVWDVDGSPERLRRDAKLSAEA LRTDQIDLLYLHRPDPKVEYEGMVRTLAGILDDGLARTAGISNANPDQIRLAHSILGDRL VAVQNQFSPGFLSSRPELELCGELGLAFVAWSPLGGYRRPLDEDAFAAFQRIADARGISR AQVILAWELSKGPHVIPIPGSHRSQTILDSLRSVDVTLNDEELAQLP >gi|302034473|gb|GL383162.1| GENE 765 763849 - 765837 1875 662 aa, chain - ## HITS:1 COG:MT2465 KEGG:ns NR:ns ## COG: MT2465 COG1297 # Protein_GI_number: 15841909 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Mycobacterium tuberculosis CDC1551 # 19 662 9 654 667 622 59.0 1e-177 MSDLSSSSAPARRPGTSVRELTFRGIVLGGLMTLIFTAANVYLGLKVGLTFATSIPAAVI SMAVLRHFKGHSVEENNIVQTIASAAGTLSAIIFVLPGLIMVGWWSGFPYWTTLAICLVG GILGVMYSIPLRRALVTGSDLPYPEGVAGAEVLKVGDSAGAAEANKVGLRVIIVGSVVSA AYALLSDLKLVKSALTKPFKTGDSSGSMVGVSMSMALIGVGHLVGIAVAAAILVGLFISY GAILPWRVSGKVGSDLTVIQDVFTSDVRFVGAGTIGVAAIWTLVKVIGPIVKGISDSISS SKTRHEGGEVPLTERDLPVSVVLTVVLISMIPIGFMLWGFARDMVVSRSMTGVIIVSLAF ILLVGLAVASVCGYMAGLIGASNSPISGVGILVVLVAALLIKLTYGAVGGGETVKLVAYT LFTASIVFGIATISNDNLQDLKTGQLVGSTPWKQQIALIIGVIFGSAIIPPVMQLMQSAF GFQGAPGAGPNALQAPQATLISSLATGVFGGALDWGLMGIGALVGIGVIVVDEILTHTTK KFSLPPLAVGMGMYLPMTLSLTIPIGAALGWLFDKWAAHTAGDVEGKKRTGILLATGLIV GESIFGVIYAAMIAAAGSEDAIAIAPESWDSGAGIVGVITFAAAIAFLYRWTKRQAKERV EA >gi|302034473|gb|GL383162.1| GENE 766 765912 - 766313 223 133 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3612 NR:ns ## KEGG: HMPREF0675_3612 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 133 1 133 133 216 100.0 3e-55 MSGLPVTFIGYCIINGLGFLIDMSLLAVFFRGVGLPYPVSVSLGYGLSAVYSFVVNRWLN FHSHGNLGRQSGRYVVTMVTNYVCLTLGLSSLLESLGVHFELARFTAACVEGLYVYLMLS IWVFPKSGRRQLA >gi|302034473|gb|GL383162.1| GENE 767 766479 - 766893 162 138 aa, chain + ## HITS:1 COG:no KEGG:PPA2401 NR:ns ## KEGG: PPA2401 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 138 1 138 165 274 100.0 8e-73 MATTRRATPADLPFMVHVLRHAAGGTSGPLDVEECRTNPAIAHYIDGWTPDQVGLICLVD DTPVGAAWVRNLPASDPGYGFVAPGIPELVIAISPHHREQGLGGYLLESLLDTCSANGIK SVSLSVGVGVGWLVRVCR Prediction of potential genes in microbial genomes Time: Wed Jul 20 20:19:14 2011 Seq name: gi|302034472|gb|GL383163.1| Propionibacterium acnes HL005PA4 genomic scaffold Scfld18, whole genome shotgun sequence Length of sequence - 113876 bp Number of predicted genes - 118, with homology - 115 Number of transcription units - 61, operones - 28 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 104 - 163 2.7 1 1 Op 1 . + CDS 307 - 1485 626 ## HMPREF0675_4452 tetratricopeptide repeat protein 2 1 Op 2 . + CDS 1482 - 2480 526 ## COG0647 Predicted sugar phosphatases of the HAD superfamily + Term 2502 - 2536 2.0 3 2 Op 1 7/0.000 + CDS 2551 - 3120 546 ## COG1268 Uncharacterized conserved protein 4 2 Op 2 34/0.000 + CDS 3201 - 3869 235 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 5 2 Op 3 . + CDS 3866 - 4486 431 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 6 3 Op 1 5/0.000 + CDS 4770 - 5546 620 ## COG1189 Predicted rRNA methylase 7 3 Op 2 17/0.000 + CDS 5565 - 6521 335 ## COG0061 Predicted sugar kinase 8 3 Op 3 . + CDS 6518 - 8197 991 ## COG0497 ATPase involved in DNA repair 9 3 Op 4 . + CDS 8213 - 8434 165 ## PPA1393 hypothetical protein 10 4 Tu 1 . - CDS 8412 - 8645 113 ## 11 5 Tu 1 . + CDS 8581 - 8790 117 ## PPA1391 hypothetical protein - Term 8864 - 8900 0.0 12 6 Tu 1 . - CDS 8948 - 9148 122 ## 13 7 Op 1 3/0.143 + CDS 9089 - 10651 1495 ## COG0504 CTP synthase (UTP-ammonia lyase) 14 7 Op 2 3/0.143 + CDS 10648 - 11307 383 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 15 7 Op 3 1/0.214 + CDS 11304 - 12224 534 ## COG4974 Site-specific recombinase XerD 16 7 Op 4 . + CDS 12316 - 13233 912 ## COG1192 ATPases involved in chromosome partitioning 17 7 Op 5 . + CDS 13218 - 13583 264 ## HMPREF0675_4435 hypothetical protein 18 7 Op 6 . + CDS 13601 - 14338 752 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 19 7 Op 7 . + CDS 14349 - 15422 984 ## COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 20 8 Tu 1 . - CDS 15465 - 16322 503 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases 21 9 Op 1 4/0.071 + CDS 16554 - 17516 704 ## COG2378 Predicted transcriptional regulator 22 9 Op 2 . + CDS 17513 - 18481 725 ## COG2378 Predicted transcriptional regulator 23 9 Op 3 . + CDS 18481 - 18684 190 ## HMPREF0675_4429 hypothetical protein 24 9 Op 4 . + CDS 18779 - 19012 354 ## PPA1379 hypothetical protein 25 9 Op 5 4/0.071 + CDS 19016 - 19885 789 ## COG0805 Sec-independent protein secretion pathway component TatC 26 10 Op 1 . + CDS 20067 - 22820 1863 ## COG4581 Superfamily II RNA helicase 27 10 Op 2 . + CDS 22870 - 23631 514 ## COG0107 Imidazoleglycerol-phosphate synthase 28 10 Op 3 . + CDS 23676 - 24086 274 ## COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 29 11 Op 1 32/0.000 + CDS 24494 - 24721 128 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 30 11 Op 2 15/0.000 + CDS 24772 - 25017 288 ## COG0440 Acetolactate synthase, small (regulatory) subunit 31 11 Op 3 . + CDS 25194 - 26222 1275 ## COG0059 Ketol-acid reductoisomerase + Term 26235 - 26284 13.4 32 12 Tu 1 . - CDS 26289 - 26807 286 ## COG4122 Predicted O-methyltransferase 33 13 Op 1 . - CDS 26934 - 27413 322 ## COG0473 Isocitrate/isopropylmalate dehydrogenase 34 13 Op 2 . - CDS 27347 - 27727 124 ## COG0473 Isocitrate/isopropylmalate dehydrogenase + Prom 27533 - 27592 2.0 35 14 Tu 1 . + CDS 27815 - 28906 739 ## COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase + Term 28918 - 28952 6.1 36 15 Tu 1 . - CDS 28946 - 30235 1140 ## COG0213 Thymidine phosphorylase 37 16 Op 1 . + CDS 30316 - 31116 567 ## COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 38 16 Op 2 . + CDS 31116 - 32060 793 ## PPA1365 hypothetical protein + Term 32115 - 32163 -0.5 + TRNA 32154 - 32225 57.3 # Gln CTG 0 0 + TRNA 32362 - 32437 73.8 # Glu CTC 0 0 - Term 32345 - 32413 30.4 39 17 Tu 1 . - CDS 32561 - 33280 505 ## COG1414 Transcriptional regulator + Prom 33271 - 33330 2.9 40 18 Op 1 . + CDS 33504 - 33839 348 ## COG0065 3-isopropylmalate dehydratase large subunit 41 18 Op 2 30/0.000 + CDS 33867 - 34274 437 ## COG0065 3-isopropylmalate dehydratase large subunit 42 18 Op 3 . + CDS 34283 - 34675 295 ## COG0066 3-isopropylmalate dehydratase small subunit 43 18 Op 4 . + CDS 34775 - 35551 450 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase 44 18 Op 5 . + CDS 35600 - 36697 745 ## COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes 45 19 Tu 1 . - CDS 36710 - 37030 151 ## HMPREF0675_4404 hypothetical protein + Prom 37103 - 37162 2.1 46 20 Tu 1 . + CDS 37208 - 38170 588 ## COG0611 Thiamine monophosphate kinase 47 21 Tu 1 . - CDS 38185 - 38475 148 ## gi|313764087|gb|EFS35451.1| hypothetical protein HMPREF9567_00927 48 22 Tu 1 . + CDS 38495 - 40861 1725 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins + Term 40928 - 40967 -0.6 49 23 Tu 1 . - CDS 40923 - 41633 590 ## COG3152 Predicted membrane protein - Prom 41672 - 41731 1.7 - TRNA 41773 - 41846 83.1 # Val TAC 0 0 50 24 Op 1 4/0.071 + CDS 41947 - 43050 1086 ## COG1186 Protein chain release factor B 51 24 Op 2 28/0.000 + CDS 43023 - 43748 314 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 52 24 Op 3 4/0.071 + CDS 43782 - 44684 673 ## COG2177 Cell division protein 53 24 Op 4 . + CDS 44730 - 45212 552 ## COG0691 tmRNA-binding protein + Term 45222 - 45266 8.4 54 25 Op 1 11/0.000 + CDS 45317 - 46366 584 ## COG0002 Acetylglutamate semialdehyde dehydrogenase 55 25 Op 2 10/0.000 + CDS 46378 - 47544 852 ## COG1364 N-acetylglutamate synthase (N-acetylornithine aminotransferase) 56 25 Op 3 13/0.000 + CDS 47541 - 48473 884 ## COG0548 Acetylglutamate kinase 57 25 Op 4 . + CDS 48484 - 49680 663 ## COG4992 Ornithine/acetylornithine aminotransferase + Prom 49689 - 49748 2.6 58 26 Op 1 . + CDS 49768 - 51228 1072 ## COG0165 Argininosuccinate lyase 59 26 Op 2 . + CDS 51225 - 51749 307 ## PPA1345 hypothetical protein 60 26 Op 3 . + CDS 51848 - 52450 329 ## HMPREF0675_4389 hypothetical protein + Term 52687 - 52741 8.9 + Prom 53080 - 53139 4.6 61 27 Op 1 . + CDS 53325 - 53579 258 ## HMPREF0675_4387 hypothetical protein 62 27 Op 2 . + CDS 53583 - 53723 156 ## BBPR_0959 hypothetical protein 63 28 Tu 1 . - CDS 53875 - 54099 100 ## PPA2388 hypothetical protein 64 29 Op 1 . - CDS 54830 - 55168 232 ## COG4283 Uncharacterized conserved protein 65 29 Op 2 . - CDS 55107 - 55358 227 ## COG4283 Uncharacterized conserved protein 66 30 Op 1 . - CDS 56761 - 57078 197 ## PPA2386 hypothetical protein 67 30 Op 2 . - CDS 57086 - 57427 167 ## PPA2385 hypothetical protein + Prom 57319 - 57378 4.2 68 31 Tu 1 . + CDS 57544 - 58401 824 ## HMPREF0675_4379 hypothetical protein + Term 58440 - 58485 13.5 69 32 Op 1 . + CDS 58901 - 59479 412 ## COG1678 Putative transcriptional regulator 70 32 Op 2 40/0.000 + CDS 59544 - 60254 565 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain + Term 60302 - 60349 3.5 71 32 Op 3 . + CDS 60371 - 61849 948 ## COG0642 Signal transduction histidine kinase + Term 61864 - 61902 1.0 72 33 Op 1 . + CDS 61946 - 63622 524 ## HMPREF0675_4375 putative lipoprotein LpqB 73 33 Op 2 . + CDS 63664 - 64311 115 ## HMPREF0675_4374 hypothetical protein 74 34 Tu 1 . - CDS 64355 - 64690 117 ## gi|313771849|gb|EFS37815.1| hypothetical protein HMPREF9574_01761 75 35 Op 1 7/0.000 + CDS 64530 - 65141 425 ## PROTEIN SUPPORTED gi|119715673|ref|YP_922638.1| sigma 54 modulation protein / SSU ribosomal protein S30P + Term 65224 - 65268 11.2 + Prom 65153 - 65212 48.8 76 35 Op 2 . + CDS 65394 - 68099 2376 ## COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) + Term 68105 - 68150 12.5 - Term 68004 - 68044 1.3 77 36 Tu 1 . - CDS 68142 - 68360 166 ## PPA1332 hypothetical protein 78 37 Tu 1 . + CDS 68811 - 69344 406 ## HMPREF0675_4370 hypothetical protein + Term 69436 - 69470 -0.5 79 38 Tu 1 . - CDS 69377 - 69850 331 ## HMPREF0675_4369 hypothetical protein - Prom 70053 - 70112 2.1 80 39 Op 1 . + CDS 70002 - 74612 2417 ## COG2902 NAD-specific glutamate dehydrogenase 81 39 Op 2 . + CDS 74609 - 75469 440 ## COG0613 Predicted metal-dependent phosphoesterases (PHP family) 82 40 Tu 1 . + CDS 75616 - 76707 1061 ## COG0180 Tryptophanyl-tRNA synthetase + Term 76783 - 76827 1.0 83 41 Tu 1 . - CDS 76771 - 78279 1116 ## COG1113 Gamma-aminobutyrate permease and related permeases 84 42 Tu 1 . - CDS 78421 - 80115 1244 ## COG0513 Superfamily II DNA and RNA helicases 85 43 Tu 1 . + CDS 80246 - 80812 404 ## HMPREF0675_4363 hypothetical protein 86 44 Op 1 . - CDS 80853 - 81080 237 ## HMPREF0675_4362 hypothetical protein 87 44 Op 2 . - CDS 81102 - 81959 464 ## COG0631 Serine/threonine protein phosphatase 88 45 Op 1 . + CDS 81981 - 82157 67 ## PPA1321 hypothetical protein 89 45 Op 2 5/0.000 + CDS 82227 - 85412 599 ## COG0210 Superfamily I DNA and RNA helicases 90 45 Op 3 1/0.214 + CDS 85409 - 88627 873 ## COG0210 Superfamily I DNA and RNA helicases 91 45 Op 4 . + CDS 88664 - 89566 327 ## COG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding 92 46 Op 1 13/0.000 - CDS 89597 - 91483 519 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 93 46 Op 2 8/0.000 - CDS 91476 - 94712 869 ## COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) 94 46 Op 3 . - CDS 94709 - 97858 616 ## COG1330 Exonuclease V gamma subunit - Prom 97900 - 97959 1.7 95 47 Tu 1 . + CDS 97983 - 100103 667 ## COG0210 Superfamily I DNA and RNA helicases 96 48 Tu 1 . - CDS 100049 - 100318 149 ## PPA1313 hypothetical protein + Prom 100202 - 100261 2.4 97 49 Tu 1 . + CDS 100418 - 100672 180 ## HMPREF0675_4353 hypothetical protein 98 50 Tu 1 . - CDS 100654 - 100908 139 ## - Prom 101042 - 101101 2.5 99 51 Tu 1 . + CDS 101134 - 101760 248 ## COG1451 Predicted metal-dependent hydrolase - Term 101703 - 101734 0.9 100 52 Tu 1 . - CDS 101748 - 103109 824 ## COG5282 Uncharacterized conserved protein - Prom 103139 - 103198 1.7 101 53 Op 1 . + CDS 103205 - 104344 584 ## COG3480 Predicted secreted protein containing a PDZ domain 102 53 Op 2 . + CDS 104362 - 104904 259 ## PPA1309 hypothetical protein 103 53 Op 3 . + CDS 104975 - 105565 244 ## PPA1308 putative universal stress protein UspA + Term 105646 - 105679 1.0 104 54 Tu 1 . - CDS 105955 - 106440 151 ## PPA1307 hypothetical protein 105 55 Tu 1 . + CDS 106422 - 106637 138 ## PPA1306 hypothetical protein 106 56 Tu 1 . - CDS 106784 - 107146 206 ## PPA1305 hypothetical protein - Prom 107210 - 107269 1.6 107 57 Tu 1 . - CDS 107287 - 107445 118 ## HMPREF0675_4344 hypothetical protein 108 58 Op 1 . + CDS 107622 - 108011 129 ## PPA1304 hypothetical protein + Term 108044 - 108080 1.5 109 58 Op 2 . + CDS 108097 - 108318 139 ## PPA1303 hypothetical protein 110 59 Op 1 . + CDS 108420 - 108737 223 ## gi|282853735|ref|ZP_06263072.1| hypothetical protein HMPREF9206_1666 111 59 Op 2 . + CDS 108734 - 109039 189 ## gi|289425057|ref|ZP_06426834.1| hypothetical protein HMPREF1034_0478 112 60 Op 1 . - CDS 109147 - 109692 463 ## PPA1300 hypothetical protein 113 60 Op 2 . - CDS 109707 - 110288 431 ## PPA1299 hypothetical protein 114 60 Op 3 . - CDS 110305 - 110820 225 ## PPA1298 hypothetical protein 115 61 Op 1 . + CDS 110552 - 111196 440 ## PPA1297 hypothetical protein 116 61 Op 2 . + CDS 111193 - 111753 235 ## PPA1296 putative permease 117 61 Op 3 . + CDS 111823 - 112344 440 ## PPA1295 hypothetical protein 118 61 Op 4 . + CDS 112341 - 113874 1108 ## PPA1294 hypothetical protein Predicted protein(s) >gi|302034472|gb|GL383163.1| GENE 1 307 - 1485 626 392 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4452 NR:ns ## KEGG: HMPREF0675_4452 # Name: not_defined # Def: tetratricopeptide repeat protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 392 7 398 398 524 99.0 1e-147 MADSSSPNNGRSGGGRRGPGRNGWSSKSGGRGGWTSKSRDRRGDHERRGGDSGRRWADDR KPRRDGGRRWDDDRKPQRKGDADRRWRDDRDSRRDDQRRRDFRGNRWDDKDQHDSRRDVR KDGRGDGHRDDRSVDNTAVQPTETPASGEPMAPLDFDEKALPAPVRAELRGVPADTAHII EGHLVAAAELLDEDPAQANAHAQAARRRAPRLPILREVAAEAAYQAGEYASALNDYRALR RMTGNDNFLPVIADCERALGRPQAALRLIREGQEAGLNPAQQIELVLVQAGARRDLGQRD EAVRLLREAVKNLKAPTEATARLHYAYAETLLEEGDTAGARKWFVSAQRHDPANFLDSQD RIDIIDGREPSGDPADDMLFIEDDNEGEETDQ >gi|302034472|gb|GL383163.1| GENE 2 1482 - 2480 526 332 aa, chain + ## HITS:1 COG:MT1731 KEGG:ns NR:ns ## COG: MT1731 COG0647 # Protein_GI_number: 15841149 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar phosphatases of the HAD superfamily # Organism: Mycobacterium tuberculosis CDC1551 # 4 308 3 307 353 192 40.0 9e-49 MSDALIDEHDAALFDLDGVVYLGPDPVPAAPDTIAELRRRGVKVGFVTNNAARSAEVVAQ HLTDIGIPTEPSDVVTSGQAISDLAADTLPAGARVLIVGTESLRDEARARGLQPVESARD DPVAVIQGYDSQIAWPLLEEAGFALQAGAMWYAANPDITRPTDRGIVPGIGAQLQVVATT CNAEPVIAGKPYRPLLEATISRLRSTSPIFVGDRLDTDVRGANTMDVDSLFVFTGSHGVA DVLAAAPEDRPQNIAADLSGLLEPKREVDVSGDRARCGRSIVSVHADREVRAESTPDDIC GQLDAVAAMMALVYGSNVTIPDDAGRLFDKLH >gi|302034472|gb|GL383163.1| GENE 3 2551 - 3120 546 189 aa, chain + ## HITS:1 COG:Cgl1913 KEGG:ns NR:ns ## COG: Cgl1913 COG1268 # Protein_GI_number: 19553163 # Func_class: R General function prediction only # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 8 185 32 207 212 76 38.0 3e-14 MSSRNGFQATDLALIAVFAALVAVLAVIPPMFMVGAVPFALQMVAVMLAPMVLGSIRGGC AVSLYILVGALGLPVFSGGSSGIGVLVGPTGGYLWGWLIGAFVAGAVATSVLRRRPRKSM LPVWLFVVALVDLVCVYLGGIFGLMGFAKLSLNAALAANLVLFGLDVVKGILACLIATAV LTAFPRLMP >gi|302034472|gb|GL383163.1| GENE 4 3201 - 3869 235 222 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 10 209 160 364 398 95 32 1e-18 MNLIVSERRVAVIGPNGAGKSTLLRLVNGLVEATDGTVTVDGINPSEDGRAARRHVGYIF TNPMSQLVMSTPVADVELSLRQRIRNRLERHEAAMQILADQGLEAVAGRSVHALSGGERQ LVSLASVLAVEPSVILADEPTTLLDLRNREMVRHAFERLDQQILCCTHDLELAASFDRVL AVEDGRIVDDGDPGEVIADYRARMVSGQGGVVPRRGGQDKSR >gi|302034472|gb|GL383163.1| GENE 5 3866 - 4486 431 206 aa, chain + ## HITS:1 COG:Cgl1915 KEGG:ns NR:ns ## COG: Cgl1915 COG0619 # Protein_GI_number: 19553165 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Corynebacterium glutamicum # 9 205 6 202 203 62 29.0 7e-10 MKTDASAFFGGYRAGNSPAHRMPVWSKYLLVLLVGVTPFFVKQWWFSLGCLVVAVVINLV VARIPVRTALSIGVPLWIANALILAYHCFFTMWQRGVIYVAGLLACLYIARLVTCTTDPG ALMDAIVALARPLRPLGAKPEKFALTIALMWTTIPYLVGSIGQVRDAAKARGLERYSWRF LIPMFVGAVGHALEIGEALKARGLGG >gi|302034472|gb|GL383163.1| GENE 6 4770 - 5546 620 258 aa, chain + ## HITS:1 COG:ML1358 KEGG:ns NR:ns ## COG: ML1358 COG1189 # Protein_GI_number: 15827705 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted rRNA methylase # Organism: Mycobacterium leprae # 14 253 5 243 269 187 49.0 1e-47 MDAPRSRRWQSVPVRLDQALVEAGLARSRTLATRLVREGRVTVNRVVVTKPAMKVSTADV LVADEEVWVSRGAHKLLGALDILGVQVPSRVLDAGASTGGFTQVVLSRGAKLVHAVDVGH DQMSPVLRNDPRVIVHEGLNLRDLQPADLAVDGVVEPVDLVVGDVSFISLTMILEPMSAV VSPDGLMLLLVKPQFEVGRKALGAHGVVTDPALRLQAIAGVMAAAVDLGWRMRDECDSPL PGQDGNVEHFVLLERTGR >gi|302034472|gb|GL383163.1| GENE 7 5565 - 6521 335 318 aa, chain + ## HITS:1 COG:MT1734 KEGG:ns NR:ns ## COG: MT1734 COG0061 # Protein_GI_number: 15841152 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar kinase # Organism: Mycobacterium tuberculosis CDC1551 # 15 306 5 305 307 232 44.0 8e-61 MGRYCGLVNDTSPSRYVVVVTHATRDDAFDAAAEFISEMAGRDIGCAVPDDQAKPMLSKL PGIDLESLGEFAHEAEVVVVFGGDGTILRAAEWSLPRHVPMIGVNLGHVGFLAELERSDM ADLVNKVCSRDYTVEDRLVLKTTVTEHSGQHRWSSFAVNELSLEKAARRRMLDVLASVDE LPVQRWSCDGILVSTPTGSTAYAFSAGGPVMWPDLDAMLMVPLSAHALFARPLVMSPAAR VDLDIQPDGSESAVLWCDGRRSCTVRPGERITVVRHPDRLRIARLAAQPFTSRLVKKFEL PVSGWRQGRDRHHLEETS >gi|302034472|gb|GL383163.1| GENE 8 6518 - 8197 991 559 aa, chain + ## HITS:1 COG:Cgl1380 KEGG:ns NR:ns ## COG: Cgl1380 COG0497 # Protein_GI_number: 19552630 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Corynebacterium glutamicum # 1 555 1 573 593 273 36.0 5e-73 MIRSVRIRGLGVIDETVLEPSSALTAVTGETGAGKTMVVTGIGLLLGDKADTGLVRHGCD RAVVEAVLDTPDAGRVSELGGTVEDGEVICARHITSRRSRALLGGAQVTASQLAHIVGDQ VTIHGQSEQVRLVDAARQLDVVDRAAGDELAGYLSRHAQLWSEFRAASQRLQRLNEDRAG AEMEREVLTRRVSEVDAVDPKPHEDDDLIAEMAGLQAAQSIRESLNKADVLLNGVETSTG PQPGALALLEQAVHELDGTGDADPHAAELAERARQMSYDLTDLAASVAGHAARAEADPQR LEELGGRLAAIQRLLRARTTTLDDLLDSTAADRHRLAELDPGATDLDFLGQQVEQLRFEL RRSADHMSAVRRRTAVRLAAEVRPELAALAMPHARLEFRVEPAPMGPRGADSVTIMLAAN PGSDLAPLAKAASGGELSRVRLALEVVVAQPQVPQTFVFDEIDSGVGGTVGIEIGRRLRQ LARRHQVIVVTHLAQVAAFADTHVVITKASDGAITSSGLREVTGSDREIELSRMMSGMVD SESGLEHAHDLLREAGEMD >gi|302034472|gb|GL383163.1| GENE 9 8213 - 8434 165 73 aa, chain + ## HITS:1 COG:no KEGG:PPA1393 NR:ns ## KEGG: PPA1393 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 73 1 73 73 140 100.0 2e-32 MGRLDHFEKSNAFIMEATVVTLSTSAEIETAIYLDPVDVGRFVDTDELAILMTCAQMHGH YHIRCPIMSRVRA >gi|302034472|gb|GL383163.1| GENE 10 8412 - 8645 113 77 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDLERCSLCMTEMRRETSHRFIHQVCTHLLLGGGSISSHPSATKYIDSTSTAIGVASLIS RMRSAITSIVFTPGLWT >gi|302034472|gb|GL383163.1| GENE 11 8581 - 8790 117 69 aa, chain + ## HITS:1 COG:no KEGG:PPA1391 NR:ns ## KEGG: PPA1391 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 69 1 69 69 119 100.0 4e-26 MNRCDVSRRISVIHSEQRSRSMNFDPDVVRREISMMYPYDPEYPWPGYSPEVMDGSLSWR MPDDLVVVE >gi|302034472|gb|GL383163.1| GENE 12 8948 - 9148 122 66 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLERVHRSRIDVEVRVQLLHCDLKATRLQKRPEGGGREPLSQGGNDPSSDENVLAAVIVG AHGPPA >gi|302034472|gb|GL383163.1| GENE 13 9089 - 10651 1495 520 aa, chain + ## HITS:1 COG:ML1363 KEGG:ns NR:ns ## COG: ML1363 COG0504 # Protein_GI_number: 15827710 # Func_class: F Nucleotide transport and metabolism # Function: CTP synthase (UTP-ammonia lyase) # Organism: Mycobacterium leprae # 1 504 44 551 590 728 70.0 0 MQKLDPYLNVDPGTMNPFQHGEVFVTEDGAETDLDIGHYERFLNENLSGQANVTTGKVYS AVIAKERRGDYLGDTVQVIPHITNEIKERMLAMEEGHPDVVIHEIGGTVGDIESLPFLEA ARQVRHEIGRENVFFLHVSLVPYIKPSGEMKTKPTQHSVAALREVGIQPDAIVCRSERPI GKGIKSKIALMCDVEGPAVVSCPDAPSIYLIPKVLHREGLDAYVVQKLSLFFRDVDWTTW DDLLDRVRKPRSEVTVALVGKYIDLPDAYLSVTEALRAGGFANKAKVNVVWVASDSCATA EGAAQQLRDADAICVPGGFGIRGVEGKVGAIRYAREHKVPFLGLCLGMQCAVIEVARDLA GIKDAASSEFDSQTPDPVIATMAEQVEAVAGKADLGGTMRLGAYPAKLAKDSLVAELYGT TTVTERHRHRYEVNNAYRDRLEQAGLRISGTSPDGGLVEFVELDRQTHPYFVATQAHPEL KSRPTHAHPLFRGLVAAAVGHAKAASKGAAKESSTKVADK >gi|302034472|gb|GL383163.1| GENE 14 10648 - 11307 383 219 aa, chain + ## HITS:1 COG:Cgl1384 KEGG:ns NR:ns ## COG: Cgl1384 COG0494 # Protein_GI_number: 19552634 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Corynebacterium glutamicum # 31 186 32 184 223 129 44.0 5e-30 MSQERWDKDEYWQGVDHQVKATGQVCDFIDDAVITPSGERINRQYVSHPGAVGIIALDDQ DRVAVVRQYRHPVRMVLVEPPAGLLDVEGEDFLAAAQRELAEEAMLSADDWRVLVDIVTT PGGCQESLRIYLARGLHEVPRPEGFLLEGEEVSMKAGWEPLDDLVEAIYAGQCQSPTLVT GVMALELARRTDRVNELRPAHAPWPIRERPGGIDGVRAE >gi|302034472|gb|GL383163.1| GENE 15 11304 - 12224 534 306 aa, chain + ## HITS:1 COG:Cgl1385 KEGG:ns NR:ns ## COG: Cgl1385 COG4974 # Protein_GI_number: 19552635 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinase XerD # Organism: Corynebacterium glutamicum # 9 305 7 304 304 268 52.0 1e-71 MTSLVGGQAEDYLRHLVVERGLSDNTVQAYRRDLLRYQEYLGSRGIGSLAEVTRVDVEEF RRHLDHIGLAPASVTRCVVAVRNLHRFAVGSGQLQADVTAGMSPGTRSRRLPKALSMDQV ESLLAAPDTSTVEGLRDAALLELLYGTGARVSEVCALDVDDIRPVLDDPDLGLRLIGKGD KERIVPLGSYAAKAVDAWLIRGRPAWAEIGNGEHALLLNTRGRRLSRQSAWAVIRRAGEA AGLDVEHLSPHSLRHSYATHLLDGGADVRVVQELLGHSSVTTTQIYTLVTADHLREVYRS SHPRAV >gi|302034472|gb|GL383163.1| GENE 16 12316 - 13233 912 305 aa, chain + ## HITS:1 COG:Rv1708 KEGG:ns NR:ns ## COG: Rv1708 COG1192 # Protein_GI_number: 15608846 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Mycobacterium tuberculosis H37Rv # 3 301 18 315 318 331 58.0 1e-90 MSETAPEPLFRVPGPGREAEEAAENSIGPTGRPLPDLTEPTPALGGPKHATVISMCNQKG GVGKTTTTINLGAGLAEYGRRVLLVDFDPQGSLSVGLGINPHTLENSIYTLLMSPRDDVH DVIQPTETEGMDLLPANIDLSAAEVQLVSEVAREQTLKRVIDRIRGEYDMILIDCAPSLG LLTINALTASDYVIMPLECEFFALRGIALLTDTIEKVQDRLNPDLEVLGILGTMFDPRTL HAREVMERVVQAFGDVVFHTVIKRTIKFPETTVAGEPITSYASSSPGAQAYRDLAKEVLA RCRAA >gi|302034472|gb|GL383163.1| GENE 17 13218 - 13583 264 121 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4435 NR:ns ## KEGG: HMPREF0675_4435 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 121 1 121 121 201 100.0 9e-51 MPRRVSLPGANELFRPTVGSHEPQSVEVPQQSKAHRARKTSQDATSRGKHAGSGRVRHDE KITVYVSTEELIALETARLTMRSQGINADRGRIVRASVAMALADFEENGEDSALAHLLTT D >gi|302034472|gb|GL383163.1| GENE 18 13601 - 14338 752 245 aa, chain + ## HITS:1 COG:Cgl1392 KEGG:ns NR:ns ## COG: Cgl1392 COG1187 # Protein_GI_number: 19552642 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Corynebacterium glutamicum # 2 245 75 320 320 225 51.0 7e-59 MSNEQGIRLQKVLAQAGLASRRAAEDMIAAGRVEVNGELIVEQGRRVDPERDEIRVDGSR IPTARRHVYYVLNKPQGVVSTMDDPEGRPCLSDLEGVPRGIRLFHVGRLDTETSGLILLT NDGEFANRMTHPSYKVLKTYLADVEGRVDDKVIRRLSKGLTLEDGPVKPDAVRLVQAGEE HSLVEVSLHEGRNRIVRRIMDSVAHPVRRLSRTAIGPVRLKRLGRGDMRELTHEELGQLL DLVEL >gi|302034472|gb|GL383163.1| GENE 19 14349 - 15422 984 357 aa, chain + ## HITS:1 COG:Cgl0807 KEGG:ns NR:ns ## COG: Cgl0807 COG0545 # Protein_GI_number: 19552057 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerases 1 # Organism: Corynebacterium glutamicum # 239 353 4 118 118 63 32.0 7e-10 MAGIVLKHRSGNLKQVSSNKYRLVNAAALAAVLCVSSLVLASCNKSSSSPKPSASVSSVS APASASAKASSSPTKKPTMVTNLDQIKVSGEDGKAPKVEGAWPLAIAKTESKILKEGTGE KVDKNATLKVNYVGVNGRTGKEFDSSYKRGTTADFPLAQVVPGFAKGLVGKHQGDRVLIM MPGSDGYDSQGGAPQAGIMKGDSLIFVVDIVAIPLPKATGETVKPAAGLPTVKEVQGAPA VTIGKATKPNKLVVQPLIKGKGAAVTAHDSIDVKYRTYAWSSGELIEDGYSGEPVTGSMN SVIPGWKKGLTGQTVGSRVMLIVPPADAYPNGSTNPPVKKGETLIYVIDILSAQKES >gi|302034472|gb|GL383163.1| GENE 20 15465 - 16322 503 285 aa, chain - ## HITS:1 COG:Cgl0237 KEGG:ns NR:ns ## COG: Cgl0237 COG0008 # Protein_GI_number: 19551487 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Corynebacterium glutamicum # 1 240 36 278 293 173 44.0 3e-43 MVRIEDLDRARVAAAGKIASTQLRDLESLGLDWDGPVVRQSERLDLYADAVAGLETYPCF CTRREIAAATTAPNKADWRPYPGTCRRLTVQQRHERLTTRAPATRLASQLNTFEATDLAR GCARGRVDDLVLVRNDGTPAYNLAVVVDDGLQGVDQVVRARDLWSSAPRQAQLAELLGFI PPVYAHTGLVTGPGGVRLSKSAGAAGLSDLVDSGIDHRQVVAWLCRSLGLPEVADPHELV NNVALTPPTPVAGIHRLDPRPLGGAMGWWSDAVLDVAVLRETRRP >gi|302034472|gb|GL383163.1| GENE 21 16554 - 17516 704 320 aa, chain + ## HITS:1 COG:ML1329 KEGG:ns NR:ns ## COG: ML1329 COG2378 # Protein_GI_number: 15827690 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Mycobacterium leprae # 1 221 1 232 331 129 42.0 5e-30 MAAQRSERLVNLVIALLVTDRPLTRAQLRDMIEDYRKVSEVAFQRSFERDKEELRRIGIT VESVTLDTFFGDEVGYRIPRADVELPPVQFTQAEADALATAARVWRESVLDESSTSALVK LRAAGVEPDTEAGIATQVVTGADAPSFSDLWRATIDRSRVRFGYRGGKHRTVDPWRMALR RGRWYLVGRDVDRDEPRLFRLSRISSAVTTVGEPGAVASPEPEVIEAHLNRLEPPEPEEV DVTMAVAPGVRLGVMTTHAEWDGPVPEGYEVVTGGFGGYDEAATAVLRAGGRIILLAPQE ARTILAERINAVLRLEENAS >gi|302034472|gb|GL383163.1| GENE 22 17513 - 18481 725 322 aa, chain + ## HITS:1 COG:ML1330 KEGG:ns NR:ns ## COG: ML1330 COG2378 # Protein_GI_number: 15827691 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Mycobacterium leprae # 5 306 6 314 324 119 31.0 6e-27 MTARTDTARLLALIPYLRSHPGVAVTEVARVFGVSTDRVIADLKILWMVGLPGGMPDDLI DIDMDAVDSDGTITITNADALPRPMRLTPDEAWSLLAALQVIADLADDTVRPAVESAVEK LRQVCPQAGPDPVEASLEADYDPRSEWFTGACANKWRIEIVHRRGDDPTPHTQIVDPVRV EVRDGHRYLVGWSMARKQWRTWRLDRIVTGRRVGHATNHGRPPETLEWFSDVVDEVTLTL APRAGWVAEYHPVRHVEKDGDVWKVTFAVASATWLAELMVGLGPDVLSVDPPHAAAPALQ LARAAAAANSIEISNREAVEKS >gi|302034472|gb|GL383163.1| GENE 23 18481 - 18684 190 67 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4429 NR:ns ## KEGG: HMPREF0675_4429 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 67 1 67 67 103 100.0 2e-21 MWWIWVLVFAGVLLVVEIVVGTIWLWRKLAAILGEVERVTGRLDELAHILEDVDTTMNKD MTAPEAP >gi|302034472|gb|GL383163.1| GENE 24 18779 - 19012 354 77 aa, chain + ## HITS:1 COG:no KEGG:PPA1379 NR:ns ## KEGG: PPA1379 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: Protein export [PATH:pac03060]; Bacterial secretion system [PATH:pac03070] # 1 77 11 87 87 117 100.0 2e-25 MAPLLIANEATIIIIVLLALVLFGGSRIAGVGKGAGRAIREFKEETAGLNKGKDAKAEKD IEATEADVAKDETKPTE >gi|302034472|gb|GL383163.1| GENE 25 19016 - 19885 789 289 aa, chain + ## HITS:1 COG:Rv2093c KEGG:ns NR:ns ## COG: Rv2093c COG0805 # Protein_GI_number: 15609230 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Sec-independent protein secretion pathway component TatC # Organism: Mycobacterium tuberculosis H37Rv # 17 286 13 288 308 153 33.0 4e-37 MATDTRQSDEDHRRFARFRPPQAGEGGTMSLLDHIRELRYRIIVSFIAVVITSSVAFVFY RPLVEIVMHPYQQASLAIKAKNPRASLQVVNTGVVAPFVLNMRVTIVAGLIAACPIWLYQ VWAFIVPGLLVNEKKWALRFLGSAIPLFLLGSVLGYWVLPKGIALMLNFTPHGMGITNLL DMNAFLALEIRVILLFGVSFLLPVALVLLNLIHVLSSAQLKAARKWSIFGFFCLGAFVNP SGDPISMCALAIPLSVMYVIAEWICRSNERKRSTDNMGIDKSEFDIQID >gi|302034472|gb|GL383163.1| GENE 26 20067 - 22820 1863 917 aa, chain + ## HITS:1 COG:ML1333 KEGG:ns NR:ns ## COG: ML1333 COG4581 # Protein_GI_number: 15827694 # Func_class: L Replication, recombination and repair # Function: Superfamily II RNA helicase # Organism: Mycobacterium leprae # 5 913 7 918 920 655 45.0 0 MSETLDRFIAGLSFEPDDYQVKACQDLDDGAGVLVAAPTGAGKTVVGEYATDLALASGLK CFYTTPIKALSNQKFHDLVTRHGEDQVGLLTGDVTINSEAPVIVMTTEVLRNMIYRNSHT LDTLGWVVLDEVHYLADRFRGPVWEEVILGLDPRVKIVGLSATVSNAEEFGEWLDEGRGD VRVVVSERRPVPLVQHVAVARRLYELFDSRRPTEVNPELTSIAKEEARFQRDDSRRPRGR SGKGKRSVSYGTGRFGGASAQRRGRGGRPRGPRNQTSRIQVVRSLHKVNLLPAIIFVFSR SGCDAAVSQLLNTDLVLTSQQEARQLRRIAQRRGEGLTDEERRAVGWNHFMAAFERGIAA HHAGLLPVIKAIVEEGFVAGLLKVVVATETLALGINMPARTVVLEKLVKYNGQTHADITP GEYTQLTGRAGRRGIDTQGHAVVCWQPGMDPRAVAGLASRRTYPLNSTFVPTYNMAVNLV GSMGREKARDLLEHSFAQFQIDRRLGGSAVRNRQTQADIEAYLKAAHCERGDFTVYARLR ENIRELEHEQARLRKVELPSQVADSLSSLDPGDIIAVPSGRHAGWVVVVDPGTHGTRGQR PRPLVMTPDRTVIRLGHQDIDAPVTRVAGVKVPRHFHPENQADRRCLGKAFDRVLEGLGR PVVKPRRAAVDAELSDQITELRSQMKAHPCHSCPDRESHARFAERAMRLRRRSERELTKA RAKATSIATQFERIVLVLEALGYLGTGGDTVTDAGRMLSGIYSELDLVTAEAIRRGVFDG LDCPQLAAVLSTIVHESRPGDRGHLHRMPDGKSEAAESQLRAVRAEIGLLERDHRIERPR DLDIGFAEASYAWAAGAGLDTVLDDMSAGDFVRRVRQVCDLAGQIAHAGVGENLAHTCRQ VVGAMQRGVVTMDREED >gi|302034472|gb|GL383163.1| GENE 27 22870 - 23631 514 253 aa, chain + ## HITS:1 COG:Cgl2041 KEGG:ns NR:ns ## COG: Cgl2041 COG0107 # Protein_GI_number: 19553291 # Func_class: E Amino acid transport and metabolism # Function: Imidazoleglycerol-phosphate synthase # Organism: Corynebacterium glutamicum # 1 253 1 257 258 289 64.0 4e-78 MAVAIRVIPCLDVKDGRVVKGVNFVGLRDAGDPVELAAEYGRLGADEVTFLDISASTEGR ATTREMVTRCAETVFVPLTVGGGVRGVDDVDVLLRAGADKVGVNTAAIAHPGMIDEVADR FGNQVIVLSVDARREPDRPSGFGVTTHGGTRSAGLDAVEWACQAVERGAGEILLNSMDAD GTADGFDIEMIEAVRAAVDVPLIASGGAGKVADFVEAARAGVDAVLAASVFHYHTLTIAQ IKDGLRHAGFEVR >gi|302034472|gb|GL383163.1| GENE 28 23676 - 24086 274 136 aa, chain + ## HITS:1 COG:L60959 KEGG:ns NR:ns ## COG: L60959 COG0537 # Protein_GI_number: 15673980 # Func_class: F Nucleotide transport and metabolism; G Carbohydrate transport and metabolism; R General function prediction only # Function: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases # Organism: Lactococcus lactis # 2 109 3 111 133 105 44.0 2e-23 MDCLFCSIAAGDIPATIIDSDDASVAFLDIEPFQDGHTLVIPRRHVTSVLDDDGELGRIS PMVTKVARRLVDSLGASGVNVVSNAGEVAGQSVHHLHVHVIPRYDREPGINAIRSAMPRR PIEEVAAMVTGESNRK >gi|302034472|gb|GL383163.1| GENE 29 24494 - 24721 128 75 aa, chain + ## HITS:1 COG:ML1696 KEGG:ns NR:ns ## COG: ML1696 COG0028 # Protein_GI_number: 15827903 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Mycobacterium leprae # 2 54 567 619 625 60 56.0 5e-10 MVDETITAANTINDRPVVVEFIIRTDAMVWPMVAFGASNDEITIARDMAPDWGDVGDDVA PGDEDSNDDEAGKMS >gi|302034472|gb|GL383163.1| GENE 30 24772 - 25017 288 81 aa, chain + ## HITS:1 COG:ML1695 KEGG:ns NR:ns ## COG: ML1695 COG0440 # Protein_GI_number: 15827902 # Func_class: E Amino acid transport and metabolism # Function: Acetolactate synthase, small (regulatory) subunit # Organism: Mycobacterium leprae # 1 81 50 130 169 61 51.0 4e-10 MTIGVDAVSAQALEQIIKQLNKLIEIHKIAEPEPSTVTRELILVKVRSNVENRSKIIDTV ALRRAKAVDASLESLTIEATG >gi|302034472|gb|GL383163.1| GENE 31 25194 - 26222 1275 342 aa, chain + ## HITS:1 COG:TM0550 KEGG:ns NR:ns ## COG: TM0550 COG0059 # Protein_GI_number: 15643316 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Ketol-acid reductoisomerase # Organism: Thermotoga maritima # 1 334 1 334 336 396 59.0 1e-110 MAKIYYDDDADLSIIQNRQVAVIGYGSQGHAHALNLRDSGVDVRVGLRDGSSSIAKAEAQ GLRVLSIEDACEEADLIMVLVPDQNQRQLYAEHIAPHLKDGDALFFAHGFNVHFGYIKAP QGVDVCMVAPKGPGHIVRREYSDGRGVPVLVCVEQDASGIAWDLTRSYAKALGGLRAGGI ETSFREETETDLFGEQAVLCGGLSHLIQAGFETLVTAGYQPEMAYFEVCHEMKMIVDLII EGGISKLRWSISDTAEYGDYVSGPRVIDDHVKKNMKAVLDDIQNGAFAKRFIADQDAGAP QSKKFREGEAKHPIEATGKELRKMYSWLAAADDDYTEGSVAR >gi|302034472|gb|GL383163.1| GENE 32 26289 - 26807 286 172 aa, chain - ## HITS:1 COG:DR0603_3 KEGG:ns NR:ns ## COG: DR0603_3 COG4122 # Protein_GI_number: 15805630 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Deinococcus radiodurans # 2 172 19 190 193 75 32.0 5e-14 MGYFTTTRNETGRFMATLAAGVHGAIGECETGSGAGAAWLRLGARKRTRVVSYEPDPTVC ARAREVLADLDIEVIEGTWDDLLDHGPFGLLSVPIRVARAHDVDEILKAVSVGGLVVIDD MPPSHGFPPHDINGTVDTTRLAWLTHPKVHATEIQLASDMAAIVACRLSARG >gi|302034472|gb|GL383163.1| GENE 33 26934 - 27413 322 159 aa, chain - ## HITS:1 COG:Cgl1256 KEGG:ns NR:ns ## COG: Cgl1256 COG0473 # Protein_GI_number: 19552506 # Func_class: C Energy production and conversion; E Amino acid transport and metabolism # Function: Isocitrate/isopropylmalate dehydrogenase # Organism: Corynebacterium glutamicum # 29 159 208 338 340 146 59.0 1e-35 MPEPCGVGSSTKLFKSSRVSPLTTCTSTYLHVDAVTIALVRDPQRFDVIVTDNLIGDIIT DLASAVTGGVGLAPSANINTSGEFPSMFEPVHGSAPDIAGTGKADPTAAILSIALLLDHL DRPEDAARVREAVSANNATRASGPARTTSEIGRDIAQRI >gi|302034472|gb|GL383163.1| GENE 34 27347 - 27727 124 126 aa, chain - ## HITS:1 COG:Cgl1256 KEGG:ns NR:ns ## COG: Cgl1256 COG0473 # Protein_GI_number: 19552506 # Func_class: C Energy production and conversion; E Amino acid transport and metabolism # Function: Isocitrate/isopropylmalate dehydrogenase # Organism: Corynebacterium glutamicum # 9 77 4 70 340 58 49.0 3e-09 MTNDVTQPAVIGGDGIGPEVTEQALHVLEQTVGSDAFATHEYHLGAAHWKATGEVLDNST LAEIAQEVAIVLDAVGATPDSTEVPSVLFGARPFRPDPQAQRARQCRNLVASDRRRSCSR VPECHH >gi|302034472|gb|GL383163.1| GENE 35 27815 - 28906 739 363 aa, chain + ## HITS:1 COG:XF1999 KEGG:ns NR:ns ## COG: XF1999 COG0115 # Protein_GI_number: 15838593 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase # Organism: Xylella fastidiosa 9a5c # 1 359 1 357 362 350 50.0 2e-96 MSLRFASADDLTWSSDERIALEHANPRFGAVLADHMAVATWQAGEGWGDDAVVNYHGLDI NPGSAVLHYAQEIFEGLKAYRHADGSIWLFRPDQNGERFVRSAKRLALPTLRVEDFVTAC MRLVEVDSRWVPEPGEGGEKSLYLRPFMIAYQDFLGLAAASTVLFSVIGSPVGAYFVSGV KPLRLLVERRQARTAPGGTGEAKCGGNYAASLRSQIDAKTRGCNEVLFVDAVEHRWIEEL GGMNFMAISKDGQLVTPELAGTILRGVTRRSILEVAPDLGLEPVERKIDVDELLDGVRSG EFPEVFACGTAAVVTPIGSFLDGDTDVKVSEPTGKTTMEIRRRLLDIQFGRAEDTRGWLK RVC >gi|302034472|gb|GL383163.1| GENE 36 28946 - 30235 1140 429 aa, chain - ## HITS:1 COG:MT3415 KEGG:ns NR:ns ## COG: MT3415 COG0213 # Protein_GI_number: 15842906 # Func_class: F Nucleotide transport and metabolism # Function: Thymidine phosphorylase # Organism: Mycobacterium tuberculosis CDC1551 # 10 426 11 427 427 418 57.0 1e-117 MTSTYSVVDLIRAKREGQTLNSDQIAWLIRAYTDDIVADEQMSAMAMAVYFQGLDDAELS AWTTAMIKSGERMSFAGLSRPTVDKHSTGGVGDKITLPLAPLVAACGAAVPQLSGRGLGH TGGTLDKMEAIPGWRADLSHDEMVAQLEKVGAVICAAGPGLAPADKKLYALRDVTGTVES IPLIASSIMSKKIAEGTDSLVLDVKTGSGAFMKTDKDARELASRLVELGEAAGVRTTALL THMDVPLGYACGNGIEVAESLEVLAGGGPADVVELTVALARHMVKVAGLDGIDPADVLAS GQAMDVWRNMVRAQGGDPDAPLPMAHHTQDIVATEAGVITGIDAMSVGLAAWRLGAGRAR KEDPVQAAAGIMLRVRPGDRVVTGQPLATLLTDTPDSIARAEDAMTNAFTVGQTFQPQDI VIDTVVAQS >gi|302034472|gb|GL383163.1| GENE 37 30316 - 31116 567 266 aa, chain + ## HITS:1 COG:MT3071 KEGG:ns NR:ns ## COG: MT3071 COG0179 # Protein_GI_number: 15842549 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) # Organism: Mycobacterium tuberculosis CDC1551 # 34 264 6 234 239 244 54.0 2e-64 MRIARFVTAGSDPAFGIVELAADHGDHPETIAVITGDPVAAPVQYTGARHDLADVRLLSP VIPRSKIIGVGRNYADHASELGNEVPHQPLLFVKPNTSVIGPDEPIVRPTASSNLHYEGE LAIVIGRICKDVPEDRAQEVIFGFTVANDVTARDLQDSDGHWVRAKGADTFCPLGPWMVT HFSIAEASHRQIVTRLDGREVQHGNTDQMVHTIPKLISYISSFMTLLPGDVILTGTPAGV GPMELGQRVEVEIEGIGTLTNTVVEV >gi|302034472|gb|GL383163.1| GENE 38 31116 - 32060 793 314 aa, chain + ## HITS:1 COG:no KEGG:PPA1365 NR:ns ## KEGG: PPA1365 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 314 1 314 314 491 99.0 1e-137 MAARVLSRHVTVTDPEPRVDYTRVLVDSSAGPGPGLLGLIGLLLGYAVVVPGLLYAFLGV GWLLERTDGERFSAYYTRAAGYHTVGGLIATHVALASLIVVVLVLARYLNHRVPRWVASV QPGIRWRFGLLVGLVAVVVLNLTQLLVRGGVNAHYIVPRHWWAWLLAIIITSPFQAIAEE MFFRGYLMNVISGLSVNLPEKAGRWTSVVVSALVFAFMHGTQNAWLFADRFAFGLLAGWL VIVTGGIEAGVAAHVVNNLFAFGYAVFLGGVSQARGMTAMSWVDAAWDVGGFLTIALAGW WIGSLMRVARRTPA >gi|302034472|gb|GL383163.1| GENE 39 32561 - 33280 505 239 aa, chain - ## HITS:1 COG:Rv2989 KEGG:ns NR:ns ## COG: Rv2989 COG1414 # Protein_GI_number: 15610126 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mycobacterium tuberculosis H37Rv # 1 216 1 215 233 177 55.0 2e-44 MDESSGVGVLDKAALVLAALETGPASLVGLVQMTGLARPTAHRLARALEHHRFVGRDLQG RFILGPRLSELAAAAGEDRLLAASGPILARLRDITGESAQLYRRQAGSRVCAAAAERPTG LRDTIPVGSVLSMDAGSAAQILLAWEDVDKIRRGLSHSAFSEVTLAAVRKRGWAQSVGER EAGVASVSAPVRSPSGKVIAAISVSGPIERLTRQPGRIHAPAVVAAGERLSEVLRRSAQ >gi|302034472|gb|GL383163.1| GENE 40 33504 - 33839 348 111 aa, chain + ## HITS:1 COG:ML1685 KEGG:ns NR:ns ## COG: ML1685 COG0065 # Protein_GI_number: 15827896 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase large subunit # Organism: Mycobacterium leprae # 4 111 65 174 485 158 72.0 2e-39 MSLLVGRSARRSVLTIATEDHNIPTVGSIEPIVDPVSRAQVEALRANAPEFGVPPLGDAD QGVVHIIGPQLGLTQPGMTVVCGDSHTSTHGAFGALAFGIGTSEVEHVLAT >gi|302034472|gb|GL383163.1| GENE 41 33867 - 34274 437 135 aa, chain + ## HITS:1 COG:ML1685 KEGG:ns NR:ns ## COG: ML1685 COG0065 # Protein_GI_number: 15827896 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase large subunit # Organism: Mycobacterium leprae # 1 134 185 318 485 191 67.0 4e-49 MAVMVDGEVPEEVTPKDLILALISEIGTGGGQGHMVEYRGEAIEKMSMEGRMTICNMSIE WGARVGMVASDETTFTYLKDRPHAPRGAQWDKAVAYWRTLRTDDDATFDAEIHVDASNLA PLRYLGYQPGAGSPP >gi|302034472|gb|GL383163.1| GENE 42 34283 - 34675 295 130 aa, chain + ## HITS:1 COG:ML1684 KEGG:ns NR:ns ## COG: ML1684 COG0066 # Protein_GI_number: 15827895 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase small subunit # Organism: Mycobacterium leprae # 27 129 93 194 198 87 45.0 7e-18 MPAVEDFEDEVARSAAFGVHGFDPDEIGSRFADIFRNNSANNGLLLAQVDPKVVGELWDF AEQHPGEQLTLSLENRTINLPGRTTYPFHIDDVTRQRLLAGLDAVGETLEHADDIAAYEA HRPSFMPTTS >gi|302034472|gb|GL383163.1| GENE 43 34775 - 35551 450 258 aa, chain + ## HITS:1 COG:MT2237 KEGG:ns NR:ns ## COG: MT2237 COG0204 # Protein_GI_number: 15841672 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Mycobacterium tuberculosis CDC1551 # 26 169 13 157 247 82 40.0 8e-16 MALPAVTNPADAPGLIFRMGVGTLYPLARILTRFDHHGGENLPGPGPALIVSNHISNYDP VVLGAFLVANGRWPHWLAKKELFSVPIVGWVASASGQIPVDRKGPNPAKVLHDAKAALDK GMTVVMYPEGTITADPLHWPMTGRTGAARLALETGVPVIPVGQWGPQEVMGYKEMTFPKL WPRKTMKLYCGTDVELSDLRGRHDLASVREATNRIMDAIDAQVARVRGEFPPPDRYDMRK GARIPKSIASARPVVDPH >gi|302034472|gb|GL383163.1| GENE 44 35600 - 36697 745 365 aa, chain + ## HITS:1 COG:ML1678 KEGG:ns NR:ns ## COG: ML1678 COG1181 # Protein_GI_number: 15827889 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanine-D-alanine ligase and related ATP-grasp enzymes # Organism: Mycobacterium leprae # 3 365 17 384 384 281 44.0 1e-75 MNRIHVAVIFGGMSSEHSISCLSAANVVAAIDAERFDVSGVGISPEGIWVRYGADEILAL PGTGQLPTVEVGDRPLVSVKQMPEGTCIVDTEGNVDAVQVVFPVLHGPFGEDGTIQGLLE MAGVRYVGCGVAASANCMDKHLTKMILSEAGVLVGPYVVVRDHEWREDRNAVLKAASRLE YPVFVKPARGGSSIGISRVTSPEHLETAIEMAREHDSKVLIEQGIRGREIECSVIDGRHG AAPRASVPGEIVVHDPDGFYDFEAKYLSGEQKASVQAHANLDDATRRRVQKVAIKAFQVL GCEGLARIDTFVTLDGAVYVNEPNTMPGFTRSSGFPLMWQASGMTYAQIVSELIELALER PLGLR >gi|302034472|gb|GL383163.1| GENE 45 36710 - 37030 151 106 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4404 NR:ns ## KEGG: HMPREF0675_4404 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 106 46 151 151 204 100.0 9e-52 MADLPQTVAGATLNDHDTTVATWGDPHIVLRCGVDKPAGLQPTSPCDVVNDVGWFSEQID DGWRFTTIGRAGNIEVTVPTSYAPQADALVDLSAAIKKMPQVRACQ >gi|302034472|gb|GL383163.1| GENE 46 37208 - 38170 588 320 aa, chain + ## HITS:1 COG:ML1676 KEGG:ns NR:ns ## COG: ML1676 COG0611 # Protein_GI_number: 15827887 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate kinase # Organism: Mycobacterium leprae # 1 318 9 323 325 215 47.0 1e-55 MATTTTISQVGEFPLISSMVGDLTMGQAVTLGPGDDGAVFQVDGSAVVSTDVLVEEVHFR RRWSTATDVGRKAVAVNVSDIEAMGAVPVALVVGFSAPGDLPASWAREFMAGMTAESQKA GVSVVGGDTTGGPVVSIAVTVIGQTAGMAPVRRDGAVPGDEVAVIGQLGLAAAGLALLGR GFRSPRSVVAAQRCPEVPYGQGRVAAKAGVHAMIDVSDGLLADLGHIAEASGFAMDIDTA KLDITESVRTVGMATGVDPLTWVLAGGEDHALAATFAPGTVPDGWTVVGRVLPPDEAPDP TVLVDGQVWQQERGWTHFHS >gi|302034472|gb|GL383163.1| GENE 47 38185 - 38475 148 96 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313764087|gb|EFS35451.1| ## NR: gi|313764087|gb|EFS35451.1| hypothetical protein HMPREF9567_00927 [Propionibacterium acnes HL013PA1] hypothetical protein HMPREF9575_01750 [Propionibacterium acnes HL110PA1] hypothetical protein HMPREF9576_02069 [Propionibacterium acnes HL110PA2] hypothetical protein HMPREF9580_01714 [Propionibacterium acnes HL087PA2] hypothetical protein HMPREF9585_02518 [Propionibacterium acnes HL083PA1] hypothetical protein HMPREF9587_01393 [Propionibacterium acnes HL025PA1] hypothetical protein HMPREF9589_00770 [Propionibacterium acnes HL059PA1] hypothetical protein HMPREF9593_00432 [Propionibacterium acnes HL046PA2] hypothetical protein HMPREF9604_02317 [Propionibacterium acnes HL036PA1] hypothetical protein HMPREF9605_01603 [Propionibacterium acnes HL036PA2] hypothetical protein HMPREF9611_02298 [Propionibacterium acnes HL063PA1] hypothetical protein HMPREF9612_02596 [Propionibacterium acnes HL063PA2] hypothetical protein HMPREF9616_02576 [Propionibacterium acnes HL007PA1] hypothetical protein HMPREF9617_02033 [Propionibacterium acnes HL056PA1] hypothetical protein HMPREF9591_02204 [Propionibacterium acnes HL086PA1] hypothetical protein HMPREF9597_01995 [Propionibacterium acnes HL005PA4] hypothetical protein HMPREF9598_01636 [Propionibacterium acnes HL050PA1] hypothetical protein HMPREF9600_02281 [Propionibacterium acnes HL050PA3] hypothetical protein HMPREF9606_02297 [Propionibacterium acnes HL036PA3] hypothetical protein HMPREF9608_02559 [Propionibacterium acnes HL067PA1] hypothetical protein HMPREF9609_00622 [Propionibacterium acnes HL027PA1] hypothetical protein HMPREF9613_02495 [Propionibacterium acnes HL002PA1] hypothetical protein HMPREF9614_01706 [Propionibacterium acnes HL002PA2] hypothetical protein HMPREF9618_01753 [Propionibacterium acnes HL082PA1] hypothetical protein HMPREF9620_02543 [Propionibacterium acnes HL037PA1] hypothetical protein HMPREF9564_02558 [Propionibacterium acnes HL053PA1] hypothetical protein HMPREF9566_02402 [Propionibacterium acnes HL045PA1] hypothetical protein HMPREF9573_02610 [Propionibacterium acnes HL072PA2] hypothetical protein HMPREF9594_01827 [Propionibacterium acnes HL005PA1] hypothetical protein HMPREF9595_02295 [Propionibacterium acnes HL005PA2] hypothetical protein HMPREF9596_00828 [Propionibacterium acnes HL005PA3] hypothetical protein HMPREF9565_01538 [Propionibacterium acnes HL053PA2] hypothetical protein HMPREF9569_01590 [Propionibacterium acnes HL078PA1] hypothetical protein HMPREF9610_00218 [Propionibacterium acnes HL027PA2] hypothetical protein HMPREF9615_01575 [Propionibacterium acnes HL002PA3] hypothetical protein HMPREF9572_01512 [Propionibacterium acnes HL072PA1] hypothetical protein HMPREF9583_01391 [Propionibacterium acnes HL038PA1] hypothetical protein HMPREF9590_01115 [Propionibacterium acnes HL059PA2] hypothetical protein HMPREF9592_01702 [Propionibacterium acnes HL046PA1] hypothetical protein HMPREF9601_01835 [Propionibacterium acnes HL030PA1] hypothetical protein HMPREF9602_02488 [Propionibacterium acnes HL030PA2] putative amidase [Propionibacterium acnes HL096PA3] putative amidase [Propionibacterium acnes HL097PA1] putative amidase [Propionibacterium acnes HL096PA2] hypothetical protein HMPREF9570_02642 [Propionibacterium acnes HL043PA1] hypothetical protein HMPREF9571_02506 [Propionibacterium acnes HL043PA2] hypothetical protein HMPREF9568_01889 [Propionibacterium acnes HL013PA2] hypothetical protein HMPREF9581_01418 [Propionibacterium acnes HL087PA3] hypothetical protein HMPREF9586_02217 [Propionibacterium acnes HL083PA2] hypothetical protein HMPREF9584_01933 [Propionibacterium acnes HL092PA1] hypothetical protein HMPREF9588_02408 [Propionibacterium acnes HL025PA2] hypothetical protein HMPREF9579_01491 [Propionibacterium acnes HL087PA1] hypothetical protein HMPREF9563_01439 [Propionibacterium acnes HL020PA1] putative amidase [Propionibacterium acnes HL099PA1] # 1 96 1 96 96 167 100.0 2e-40 MPDHVADSTWATGLGEVDALEGVDLLRELADVFLLLPFERAPEPRDDFFAAVFRGRAGED ARVAMSLTLSTMATTRPEVKRGVTGLVVVARNSTAL >gi|302034472|gb|GL383163.1| GENE 48 38495 - 40861 1725 788 aa, chain + ## HITS:1 COG:ML0977 KEGG:ns NR:ns ## COG: ML0977 COG1674 # Protein_GI_number: 15827463 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Mycobacterium leprae # 3 782 121 872 886 662 51.0 0 MIRGIGGRPSEPDITHDGTGLVLLLLSALVAAGFWFDLPGGFGNGLRMGVSTIFGALSYA LPLFGLAAMWHTLRHPVTLGTGGRQVLGWACFFLGLLGVINIAHGLPRPDHPEVVRAAGG MLGYISSSLFADLLTKWVALPLLLVMTALGVLLVVGRPLIDGVTHIRSASHRAVVKPREI ESRRAYDTPLVGDTLVDHRDDDVDTQQMDPVKERPRKRKSSSERTNESLDAIFDAEIVDE TPSASAEESLPRDVPTDDELNKARTTAGLPQGFTVHEHTDLEPPAHEPMPARVEQLQLSG DIAYTLPASELLRPGSVPQARTDASDAVVSKLSTVFDEFGIDAQVTGYSRGPTVTRYEVE LGAAVKVEKVTALSKNIAYAVASPDVRILSPIPGKSAIGIEIPNRDKEVVSLGDVLRSSK ARNDHNPLVVGLGKDVEGGFVIANVAKMPHLLVAGATGSGKSSFVNSLITSVMMRATPDE VRMMLVDPKRVELTQYEGIPHLVTPIITSAKKAAEALQWVVREMDQRYDDLAAFGFRHVK DFNKAVQAGEGTLPPGSERVLAPYPYLLVVVDELSDLMLVAPRDVEDSIVRITQLARAAG IHLVLATQRPSTDVCTGLIKANIPSRLAFATSSMTDSRVILDQPGAEKLVGQGDGLFLPM GASKPVRVQGAWVSDSEIHQVVSHVKSQMEAHYRDDVAAPTAAMKVAEDIGDDMELVLEA AKLVVELQLGSTSMLQRKLRVGFAKAGRLMDILETRNVVGPSEGSKARDVLVKPDDLDDV LANLQAEG >gi|302034472|gb|GL383163.1| GENE 49 40923 - 41633 590 236 aa, chain - ## HITS:1 COG:SA2133 KEGG:ns NR:ns ## COG: SA2133 COG3152 # Protein_GI_number: 15927922 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Staphylococcus aureus N315 # 53 231 5 180 206 68 30.0 1e-11 MTEPNNPHRPDEAGVSGWPSEAGRDPYGQPSNPYQMPAPYSSGLPVAENHRRPYVDFGLA IKLFFKNYAVFRGRASRSEYWWTVLFNFIIAVAIQALMPILQGVGLMSAITSNSTTEFSA MSTSGVIFTMLPLAWLLAIIIPCLALTVRRLHDVNHSGWWVMAPTLCGIASAIMMILALV SAAANDGKPSMALLTIGIVLFVAIFVVNIILLIFVISDSHPEAWKKYDKEPLPVTE >gi|302034472|gb|GL383163.1| GENE 50 41947 - 43050 1086 367 aa, chain + ## HITS:1 COG:Rv3105c KEGG:ns NR:ns ## COG: Rv3105c COG1186 # Protein_GI_number: 15610242 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor B # Organism: Mycobacterium tuberculosis H37Rv # 5 367 11 378 378 442 67.0 1e-124 MALVDLQQTVEDLDASLSSIENVLDPEAKKAEIADLERQGAVPNLWDDQENAQRVTSRLS ALQAEIERLERLRARIEDVHVLLEFAAADDKESLAEATTETVKLREEIDALEVRTLLSGQ YDEREAVVTIRSEAGGVDAADFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFV VHAPFAYGTLSVEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVD VFHASGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKLLEKAREE QEAEMNSLKSEGNSWGAQMRSYVLHPYQMVKDLRTNHEVGNTDAVFDGDIDDFIDAGIRW RRKNETD >gi|302034472|gb|GL383163.1| GENE 51 43023 - 43748 314 241 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 13 223 3 215 223 125 35 9e-28 MASQERNRLTGTDVITFDSVTKTYTGQSQAALSDVNVDIDKGEFVFLVGQSGSGKSTFIR LILREYRPTRGTLYVAGKNLNQLRSWKVPALRRQIGTVFQDFRLLPRKTVYENVAFAMQV IGKPTKEIRSVVPETLELVGLDGKQKRMPDELSGGEQQRVALARAFVNRPKILIADEPTG NLDPDTAVGIMKVLDRINRTGTTVVMATHDSTIVDQMRRRVIELEFGHVVRDENEGVYRN S >gi|302034472|gb|GL383163.1| GENE 52 43782 - 44684 673 300 aa, chain + ## HITS:1 COG:MT3185 KEGG:ns NR:ns ## COG: MT3185 COG2177 # Protein_GI_number: 15842672 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division protein # Organism: Mycobacterium tuberculosis CDC1551 # 5 299 7 296 297 137 28.0 2e-32 MRHTLRETWSGLRRNAAMTLAVVVTMWVSLSLFGAALLATQQVGLLKGKWYDKVEVSVFL CVDGVPGAQCSGEKAATQAQKDAIREALESNPQVSRVYYESKHEAFEEYQRIYADSPVRD VLTEDTIQDSYRVKLVDPQQYQGVVTEAQSLPGVQSVVDLHNVLDPIFLWMNALRWVTFG MSVLLLVAAALQIGNTIRMAAFSRRRELGIMKLVGASNTYILMPFLLESLIAGLLGALLA CVTLALGADVVVMRKMAHSITTLAWVGWPQVWKSIAWMVVVAVVLSVAPAYVATKKYLRV >gi|302034472|gb|GL383163.1| GENE 53 44730 - 45212 552 160 aa, chain + ## HITS:1 COG:Cgl0781 KEGG:ns NR:ns ## COG: Cgl0781 COG0691 # Protein_GI_number: 19552031 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: tmRNA-binding protein # Organism: Corynebacterium glutamicum # 9 156 14 160 164 145 51.0 4e-35 MPREQGVRVVARNRRATHDYTIGDTWEAGLVLQGTEVKSLRAGKATLTDAFAQVDERGEV WMYNLHIPEYAFGTWRNHDVMRKRKLLLNKREIAKLSREADGPGKTIVPLQLYFKDGYAK VEIAVGTGKRDWDKRQAIRERDAKREAQRVLANRVRNRKR >gi|302034472|gb|GL383163.1| GENE 54 45317 - 46366 584 349 aa, chain + ## HITS:1 COG:Cgl1361 KEGG:ns NR:ns ## COG: Cgl1361 COG0002 # Protein_GI_number: 19552611 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate semialdehyde dehydrogenase # Organism: Corynebacterium glutamicum # 8 349 15 357 357 244 42.0 3e-64 MSAKGFTVAVAGASGYAGAEVVRLLSGHPALTMGDLAAHSQAGLPLAHVMPHLVGVAKER TLSEIDVERLASHDAVVLALPHGASGQIVQELVKMNPDLVIVDAGADFRLLSASDWQRWY GSDHAGTWTYGLPELPRAEGGSQRDMLSGATRIAAPGCNASAVALGLAPLVGLVDISQST ATLIVGTSGAGKSSRPDLTFSRMSGGAHPYSVGNAHRHIPEILQSLRMAGAEKPHLSVSA VLVPMTRGILAVCTAPSQASSDDLLARLREVYGDEPLIHVTNAYPDTHDVVGSAMTHINA VGDPDNGLATIVVALDNLVKGTAGAVIQCLNVAFGLPETTGLPLIGLNP >gi|302034472|gb|GL383163.1| GENE 55 46378 - 47544 852 388 aa, chain + ## HITS:1 COG:ML1407 KEGG:ns NR:ns ## COG: ML1407 COG1364 # Protein_GI_number: 15827737 # Func_class: E Amino acid transport and metabolism # Function: N-acetylglutamate synthase (N-acetylornithine aminotransferase) # Organism: Mycobacterium leprae # 3 388 19 407 407 287 47.0 2e-77 MSVTYPLGFRAGGIQAGLRTTPGLDLALIVNDGPADVVAGVFTTNRVCAAPVQWSRHATA DHKARAVIVNAAVANACTGINGFADCQCEAEHVATLLECKPHEVVIASTGVIGVRLDMPS ILVGASTIHRALGRGDNADASAARAIMTTDTVPKMATVDAGGARFGGIAKGAGMLAPQLA TMLVFLTTDAIVDPEEFQDSLAKACDITFSRVDSDACMSTNDTVVAMASGASGISLTGDE LTDALTELCAILARQLVADAEGSHHDVKVTVTGAISTEAAVAVAREVTRSNLVKTAIAGN DPNWGRILAAIGCVPENVAPFDPDQVDVSINDIQICKAGGIGEDRNLVDMRPREVHIDIE LHAGDAEAAVWTNDLTHQYVEENSAYTS >gi|302034472|gb|GL383163.1| GENE 56 47541 - 48473 884 310 aa, chain + ## HITS:1 COG:Cgl1363 KEGG:ns NR:ns ## COG: Cgl1363 COG0548 # Protein_GI_number: 19552613 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate kinase # Organism: Corynebacterium glutamicum # 14 307 8 295 317 274 50.0 2e-73 MTLALDIPLNDTQFSAQRKSEVLVEALPWIRRFQGRTVVVKYGGNAMGDPGLQQAFADDI VFMASVGIRPIVVHGGGPQINAMLAESATPVEFRNGLRVTSPEVMEVVRMVLVGQVGRQL VNRINAYAPLAAGMSGEDSGLLSARKSRVIVDGEQIDMGLVGDIVDVNIDLVISMLDRGQ IPVIAPVSPEVDAAGRPTGQVLNVNADTAATAIAQALRAEKLVMLTNVAGIYGTWPDPHT LISEVSASDLRAMIPRLGEGMRPKAQALLDAIDGGVSSAAIVDGRIEHALLLEIFTTRGV GTMARSDDYV >gi|302034472|gb|GL383163.1| GENE 57 48484 - 49680 663 398 aa, chain + ## HITS:1 COG:ML1409 KEGG:ns NR:ns ## COG: ML1409 COG4992 # Protein_GI_number: 15827739 # Func_class: E Amino acid transport and metabolism # Function: Ornithine/acetylornithine aminotransferase # Organism: Mycobacterium leprae # 1 395 1 395 404 329 47.0 6e-90 MAEQQTNGNWQERYRNALLGVFGNPQLCLDHGQGCVVVDNDGKEYLDLLAGIAVNALGYA HPAWVEAVSHQSETLAHVSNFFTTGPQLDLAEKLLALAKAPKGSAVFLSNSGTEANEAAI KICLARKNGRIIALNHAFHGRSLGALSLTHKIAYRQPFGPSAVDVTFIAPEDPDALASEL DRGDVSGVFMEPIQGEAGVVPLSDEYLQQVRELTACHDVLMVVDEVQCGMGRTGRWFAHQ SAHITPDVMTMAKALGGGFPIGATMAFGSDVSGILAAGQHGTTFGGNPLACAAALAVIST IESDDLLTHVRQIGTLMSTALRQSHPRITEVRGTGALLGVQFDSDIAADLVAAARDAGFI VNAVNPSTLRLAPPYILTKAEAESFIAALPRLIDAVQA >gi|302034472|gb|GL383163.1| GENE 58 49768 - 51228 1072 486 aa, chain + ## HITS:1 COG:Cgl1368 KEGG:ns NR:ns ## COG: Cgl1368 COG0165 # Protein_GI_number: 19552618 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate lyase # Organism: Corynebacterium glutamicum # 20 486 10 476 477 540 62.0 1e-153 MTTEPYDHSQNNAQADRPMALWGGRFSGGPSEALAALSVSTQFDWRLARHDIAGSSAHAG VLHAAGLLDDDQYEGMMKALNALEEDVVSGRFVAQPEDEDVHTALERGLMERAGKDLGGR LRAGRSRNDQIIALLRRYLREEARSLAGELLGLAHVLSRQAEDVGDAVIAGRTHMQHAQP VLLAHQLLAHAWPLLRDVQRFRDLDARLDCSPYGSGALAGSSLGLDPEAVARDLGFSSSV PNSIDGTAARDVVAEFAFVAAQVGVDLSRLSEEIIIWNTREFGYVTLDDSFSTGSSIMPQ KKNPDIAELARGKAGRLIGDLAGLMASLKGLPLAYARDLQEDKEPVFDQIDQLHLLLPAI TGMVDTAVFNTDRMAEMAGQGFSLATDVAEWLVRQGVPFRVAHELSGACVREAESQNKEL ADLTDQELTAIDPRLTPQVREVMTVQGSVRSRAGRGGTAPERVAEQITELREAIAGLRSF GEAETR >gi|302034472|gb|GL383163.1| GENE 59 51225 - 51749 307 174 aa, chain + ## HITS:1 COG:no KEGG:PPA1345 NR:ns ## KEGG: PPA1345 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 174 1 174 174 357 99.0 9e-98 MNWGTDDSSLRVTNEQRDRVLDHINDAYAHGAIDDMERERRTETALLARTRCELDESYRN LPSFKPSVPEGIRTPLPDIPDKRPTTGVGLCGLSALVSGPIGPAVGFALTAQGSWAHSKI KLQLVTQIVFFAFVAGFGISPTGFGLNHRNAGFLSLIWTVVTIVQAVRGFKGQD >gi|302034472|gb|GL383163.1| GENE 60 51848 - 52450 329 200 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4389 NR:ns ## KEGG: HMPREF0675_4389 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 200 1 200 200 370 100.0 1e-101 MNSWQTWQTGKDGWLVNDVDRDRVVAFLRDAYVDGRLSPDDFDDRVTRALGAVTRADLNA ALTGLAVVGGQAHGSRIAAGETLAAGVIGLSPLFLGPLGPMLGVAISPRGSWIRRQAAQQ ANFQLVALLLAIVVLGVAVKTNLMIVTFPFVGMAWFAGTIMHAAKAFEGIEWTNPLLRVI PLRFFDDGRRRAVGSLSRGR >gi|302034472|gb|GL383163.1| GENE 61 53325 - 53579 258 84 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4387 NR:ns ## KEGG: HMPREF0675_4387 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 84 1 84 84 157 100.0 1e-37 MGTFDTNRSLLKYILLGIITFGIYDVWVLARAGEDLNVIASRWDGRRTMNFWLVALVISP LTIGIAMYIWMHQVCGSIGREQNR >gi|302034472|gb|GL383163.1| GENE 62 53583 - 53723 156 46 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0959 NR:ns ## KEGG: BBPR_0959 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 5 46 124 165 166 62 66.0 5e-09 MKSGVTAGDFWLWAVLGGFIIVGPFIFMHKFLHAVNALAADYNVRG >gi|302034472|gb|GL383163.1| GENE 63 53875 - 54099 100 74 aa, chain - ## HITS:1 COG:no KEGG:PPA2388 NR:ns ## KEGG: PPA2388 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 74 13 86 86 125 100.0 7e-28 MLSLLLGSCTHTDMVQTNSIVEIIPPSHHDNNWAASHRNETRIRADPSITDQAARAKSVR VFSALIDSQRSLTS >gi|302034472|gb|GL383163.1| GENE 64 54830 - 55168 232 112 aa, chain - ## HITS:1 COG:FN1248 KEGG:ns NR:ns ## COG: FN1248 COG4283 # Protein_GI_number: 19704583 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 20 108 111 199 204 94 46.0 3e-20 MNGTISSPYGSVPIRLAPSPEPYTWRNYAALNEQFVRQHQNTTYEAARDLLAASHQHVLG IIEGFSNDELFTKKHFGWTGTTSLGSYFVSATSSHYEWAAKKTRTYARILAR >gi|302034472|gb|GL383163.1| GENE 65 55107 - 55358 227 83 aa, chain - ## HITS:1 COG:FN1248 KEGG:ns NR:ns ## COG: FN1248 COG4283 # Protein_GI_number: 19704583 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 1 80 25 104 204 85 48.0 3e-17 MPRPTTKSELLAAASASFKKLTTLWDGFTPEQAHAPFPAALLTGGTEAHWQRDKCLRDVV IHLHEWHNLVTVWVSANQAGTLS >gi|302034472|gb|GL383163.1| GENE 66 56761 - 57078 197 105 aa, chain - ## HITS:1 COG:no KEGG:PPA2386 NR:ns ## KEGG: PPA2386 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 105 24 128 128 190 99.0 2e-47 MEVRCILEDTVVHHARLHTHYISIEICSNSNSDASFASRPHAYIHEQWLSPRCGCRREDR ILARDICTRHHVPTRKLSTAQIRADMAGIYSSAPHKSDHDDDPGP >gi|302034472|gb|GL383163.1| GENE 67 57086 - 57427 167 113 aa, chain - ## HITS:1 COG:no KEGG:PPA2385 NR:ns ## KEGG: PPA2385 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 113 31 143 143 214 96.0 1e-54 MSGNSTRKLVTYRLSLRETSYLCIFLSYSVYPCQTQDDGCHIPFLVNLREEEMPRYMFHP VITNATTIYPRTAGTSLTMPRFWIPIVALIRASGASSRICHLNNSIHPCPLHG >gi|302034472|gb|GL383163.1| GENE 68 57544 - 58401 824 285 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4379 NR:ns ## KEGG: HMPREF0675_4379 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 285 1 285 285 461 99.0 1e-128 MKVKFLAAPLIVGALMAPAAFSGATAYAAPVAPIVAVSATQPNKTLSVAEAQKELQVVNA RIASLLDTQKSAKEAFAPANVLNIIGKLLETARRIKEALVNVIKGGIAFLKSIPTRVELL VTMVDTVNGAAHTLQDKAQPAHSHVFLELVHASVLLVTVSATSDQLKDEMAAVKKALAEA QKMPDLKPNDVATFYTKTKLSRVLRQIRFDRNTCVLPFKRLGTIYFMSRALLKATGVLME PLVRVSEVDQAITDVKAAYQDALKAPNRLLTPAVPSVCLPAPAAS >gi|302034472|gb|GL383163.1| GENE 69 58901 - 59479 412 192 aa, chain + ## HITS:1 COG:MT0043 KEGG:ns NR:ns ## COG: MT0043 COG1678 # Protein_GI_number: 15839415 # Func_class: K Transcription # Function: Putative transcriptional regulator # Organism: Mycobacterium tuberculosis CDC1551 # 7 184 16 194 202 118 39.0 9e-27 MDLVILANPLKVGDLLVASRQIDEGIFYESVVYLIDVALDGVLGVIVNQPCTAGTLHRQL PGWVHLATPPQDLFLGGPMSPNGAICLARVQRSSEEPPGWRRVQGLTGLLHLDTPTELVE GAFTDVRIFAGYAEWVPGQLEAELIRGDWIRAVAHPEDIFSSEPRGLWRAGLHRQNGPAA LLATATDTPALN >gi|302034472|gb|GL383163.1| GENE 70 59544 - 60254 565 236 aa, chain + ## HITS:1 COG:Cgl0731 KEGG:ns NR:ns ## COG: Cgl0731 COG0745 # Protein_GI_number: 19551981 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Corynebacterium glutamicum # 10 228 5 221 226 248 59.0 9e-66 MDAAGDHGPILVVDDDAALAEMLQLVLIKEGFSTAWVGHGSDVMDVFREHRPALVLLDLM LPGRDGIRICQDIRRESGVPIIMLTARTDTPNVVQGLGAGADDYVCKPFRSAELIARIRA RLRTPVSRREEGEVITVGDLTIDPVAHLVQLGGEEISLTPLEYSLLVTMAQYPNRVFSRE TLLREVWGYTNITDTRLVNVHVQRLRSKVERNADHPQMIVTVRGIGYRINTPGEES >gi|302034472|gb|GL383163.1| GENE 71 60371 - 61849 948 492 aa, chain + ## HITS:1 COG:ML0774 KEGG:ns NR:ns ## COG: ML0774 COG0642 # Protein_GI_number: 15827335 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Mycobacterium leprae # 4 480 50 532 562 296 38.0 5e-80 MSSSLVILIVGGFFLVRQATAGIVEAKRTSAVAETTATINRIQGQLRDTDLRTASFYERL NLLADDAASQSDQYHVLIQGPVSGLISQGVSPDSVPTDLTATVGESNGMWTAPTTVHYTD HVRPDVPGIVVGSTLWSPEASQSIPVYFIFPETQEVAAVELLRRSVISVGALMALAIAVT TYLATRHISLPIRQASITASKLAKGALDERMVVRGTDDLATLASSMNDMAAQLDLRIGEL EKLSSLQQQFVSDVSHELRTPMTTMRMASEMVEANPDDPVQVRSVELMRDQMERLELLLA DLLEISRFDAGAAQLSLEDCDIVDLVRSEISDVTPLADRLGVSIVLVAEAAQTAEVDPRR ISRIVRNLVSNAVEHAERKTVEVTVVGNDCAVGVAVRDHGVGFEAWQAEKVFGRFWRGDP SRVRTVGGSGLGLAISRQDANLHHGWLTAWGRPNQGAYFRLVVPRQPGGVIVKSPLPASP TDADRSDDEEER >gi|302034472|gb|GL383163.1| GENE 72 61946 - 63622 524 558 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4375 NR:ns ## KEGG: HMPREF0675_4375 # Name: not_defined # Def: putative lipoprotein LpqB # Organism: P.acnes_SK137 # Pathway: not_defined # 4 558 37 591 591 979 100.0 0 MLSRAAARESIDVAPHPPADGASIDLVVGGFLQAMASVRDDYRVARSYLTSDIADRWDPH AKVTIYDATNHKPASTVATAALQAPVVGQIDSRGHYHPTSSQTLNHDFGMAQESGQWRIS RPPEGVLISQYTFQRSWSTIPIYFLTEAADRLVPDVIHLPSAAADPDAALRAMTAGVPEP LDAVLRTALPDGVTVTGTTSVDAVGVVTVPLSASAAQLSPSQRRLLASQVTWTLNGFAAI SRIRFTAGGSLLSLPEAAEDQSVSADLYAEFIPFPATHSPTVVAVIKGQMGRVAASGHNF RIMPGALGRGATTNNSVAEVASTQFTMPMISPRSPGAIWHAVSADRRSLLTWQEGSEDIQ VLATGVNLRRPQVLRDHSIMTFSDTDPTLIVVGSDGARMSTVVDLGGCRVTSFSVAPDAV RVALVLERGKTRALGIGLLSRQEGAVHLSHITDIPLSSSDVNLSIITDVAWLSQTRLCVL GRAIDAGVTTPYEIVVDGSGATSMGQLTATSMAAVVALPTEMGTEAVVLCEDGTLLLHEE SFRWRQILQGVNAVAVTT >gi|302034472|gb|GL383163.1| GENE 73 63664 - 64311 115 215 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4374 NR:ns ## KEGG: HMPREF0675_4374 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 215 1 215 215 399 100.0 1e-110 MNTLESLADLFLGACCPGCTAPGIGICQACLEAVNPAPRVILDGPPPIIACMGYHGPIPG IVTAHKDRGATWLTDQLGQWLACGLAPAVAAAPGHVDVVPVPSSRRAVRKRGADHAADMT RSALEWLKVPGATVNQLLHRTRQVADQLEVGDEQRGVNQRGSMRADSGSGDVIIVDDVRT SGATVEEACRALTRSGRQVLAIVVLADAATATRWP >gi|302034472|gb|GL383163.1| GENE 74 64355 - 64690 117 111 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313771849|gb|EFS37815.1| ## NR: gi|313771849|gb|EFS37815.1| hypothetical protein HMPREF9574_01761 [Propionibacterium acnes HL074PA1] hypothetical protein HMPREF9575_01788 [Propionibacterium acnes HL110PA1] hypothetical protein HMPREF9593_00396 [Propionibacterium acnes HL046PA2] hypothetical protein HMPREF9609_00589 [Propionibacterium acnes HL027PA1] # 54 111 1 58 58 105 100.0 8e-22 MAWSLGPLVPWAVKTTSARWTRSFNFSTPESLSSTWARTSSLTWQCRPETMTSMTTSCAG VCIGLSDADTKGTTVFHPLMRDPGAVRSCHASTLAQTGRSQQMFGKLQRAQ >gi|302034472|gb|GL383163.1| GENE 75 64530 - 65141 425 203 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119715673|ref|YP_922638.1| sigma 54 modulation protein / SSU ribosomal protein S30P [Nocardioides sp. JS614] # 1 201 1 204 207 168 43 1e-40 MEVIVSGRHCHVSDDVRAQVEDRLSGVEKLKDRVQRAEVVFTAQGTKGPKDQAMTCEITL RAKGPVVRAVGQAEDKMVAFDMAADRLRTQLVKAADRRRSRRGLRVSQVLDVLPEESTDD APDILTTRTIAGDVEVTGDSPIYVKEKIFQAVPLTLAQALDEMELVGHDFFLYLDQDSKR PSVVYRRKKGYNYGVIHLDLDHE >gi|302034472|gb|GL383163.1| GENE 76 65394 - 68099 2376 901 aa, chain + ## HITS:1 COG:ML0779 KEGG:ns NR:ns ## COG: ML0779 COG0653 # Protein_GI_number: 15827340 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecA (ATPase, RNA helicase) # Organism: Mycobacterium leprae # 3 874 1 906 940 1021 60.0 0 MNLMDRVLHAGEGKIIRRLNRIVGQVNSIEEDYVAMDDDELAGQTADFRQRLDNGESLDR LLPEAFATVREASKRVLGKRHFDVQIMGGAALHQCNIAEMKTGEGKTLVGLLPAYLEGLL GEGVHIVTVNDYLARVQSEQMGRVHRFLGLSISAILSDMPPMARKEAYKADVTYGTNNEF GFDYLRDNMASSLSECVQRGHHYAIVDEVDSILVDEARTPLIISGPAEENKQWYPEFAKI VSRLERDVDYEVDEKKRTVSVLGHGITVVEERLGIENLYESANTPLIGYLNNAIKAKELF HRDKDYVVVGGEVLIVDEHTGRTLAGRRYNEGLHQALEAKEHVEIKDEYQTLATITLQNY FRMYDKLAGMTGTAKTEESEFQKIYGLGVIPIPTNRPMIRKDQKDLIYRTEDAKFDAIIA DVVERHEAGQPILIGTASVAKSELLSEKLKRAGVPHKVLNAKHHESEAAIVALAGRKGAV TVSTNMAGRGTDIILGGNPEFLTELDLREKGLDPLEDQDAYQTAWNNTLAKYEEQSQAEH NEVEGLGGLYVIGSERHESRRIDNQLRGRSGRQGDPGESRFYLSLQDELMRLFKPEVIDR AMVTLKMPEDMPIESKWVSRQIESAQKQVEAQNFEMRKNVLKYDDVMNRQRHVIYGDRRK VLEGADVEAELRATTDRVVEAGVRKYAEGYSEDWDLDAMWNEIGTVYPVGLDLDEYADCQ DVEELIEDFKADAQEAYDRRESELGEATMRQLEREVLLTVLDRKWREHLYEMDYLREGIG LRAMAQRDPLVEYQREGGDMFNSMMDSFKEEVVGFLFNLEIETGPQVGLVTDDGGNPVTA DSVLPKGNRPRRALTYSAPDEQGEAETTSEGGQKPRGEGNRAARRSAASKKPKNRRNKKR R >gi|302034472|gb|GL383163.1| GENE 77 68142 - 68360 166 72 aa, chain - ## HITS:1 COG:no KEGG:PPA1332 NR:ns ## KEGG: PPA1332 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 72 200 271 271 139 100.0 3e-32 MLLVGEPRVSYDDNRVDGVGLLDLRGRRLPLATSLILEERAWRLDAVELVLNPKVATLLT LKKITCETVGLG >gi|302034472|gb|GL383163.1| GENE 78 68811 - 69344 406 177 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4370 NR:ns ## KEGG: HMPREF0675_4370 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 13 177 1 165 165 290 99.0 1e-77 MDLRPRRPRRVQLSTSTIVFIPTSAERAHQLVAAPGKQVTAFTVTEELQSILDVTDPEET EHAAMVIGSVWGLTHTGRRLVLVAHVPPEQITDHEEVDNGGVTLTHLEPSQITAWFADDD DAHSREAAEAVKGMTIDDAWNDVTIQTLIGEHELSWHDVTEELPAVSTDPEGFRGLE >gi|302034472|gb|GL383163.1| GENE 79 69377 - 69850 331 157 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4369 NR:ns ## KEGG: HMPREF0675_4369 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 157 1 157 157 279 100.0 3e-74 MDINSRAHFDATPDQVVAMMTDPAWWQDVHRRGGGTTSNAVVTGDSLSLDVAMPAPSQIT TFVGSTLTAKQTLSWQPAGPNGSREGTLQIVPQGMPAKADGHASVRPDATGTEVIYTGTF TVSVPLVGKKLEKAAAPHITQAFNMQQDAGNDWLASH >gi|302034472|gb|GL383163.1| GENE 80 70002 - 74612 2417 1536 aa, chain + ## HITS:1 COG:VC1492 KEGG:ns NR:ns ## COG: VC1492 COG2902 # Protein_GI_number: 15641501 # Func_class: E Amino acid transport and metabolism # Function: NAD-specific glutamate dehydrogenase # Organism: Vibrio cholerae # 62 1480 95 1536 1613 1009 39.0 0 MDEVIPALVAAVQEQHATGDHYRDDAIRQAMEHQAQLALRPGPVRVDVIVDPPWSDGQIN SVQVVTGDRPFLVDTVASCLLRHGWRVEDVRHPIIGVKRDRGTIEAVGMPGRGGCASESW IHIDATAPLGTDIGQAAEQLRDDLCACLDQVVCATDDWGAMHEAMLRTAELVSASSGPAD DRDSSRELLEWLADDHFMYLSYQEFTVDGETMTPVAGTHLGIAEEGPRFDAVPHNDDKAT VIVTKDSVRSAVQRNGYRDYIGVRIRDEHGAVVAEHRFLGLLGSAAYTESVAHIPVLRGK ASRILALSGYRANSHSGKAVVRTIAEFPRDDFFEASAEELVPLIMAVVDLREKQRLRALV RRGPWGRFFHLLVFVPADRFDASTVGVVEGIVAKRTGAVEVDSTTMMGESSLVRITVTAK VADGQVLPPIDDEKLQAELADATSNWDDEFITLASGIPSNRRGVDFGPEYKQEFTAKQGI LDLELLNGLAEDDLGLVMYRPDDPADPSDLRLKIFNQRAPMTLSQVMPHLSSLGVQIIDE HPHRIILRGREVWLFDLGLQTPGELWKVAGRRRFTEAFAASWKGECESDTFSGLVTEAGL SWSQVAMLRCIARYLRQLGSPFSQTYMARALRANPNLARDLVGIVEAKFDPTAFDDGVDA GPQRLAKVEELSESFLTDLEEVASLDHDRILRMMHAVIRAMIRTNWWQSGRRALAFKVRP TDLGFAPAPRPKFEIFVNSPRVSGTHLRFGAVARGGLRWSDRPEDFRTEVLGLVKAQMVK NSVIVPAGAKGGFVPAHLPDSTTNRAEWAAEGKECYRIFVSSLLSLTDNVVEGKVVAPED VVRHDGDDPYLVVAADKGTATFSDTANAIAAEHHFWLGDAFASGGSHGYDHKAMGITARG AWESVTRHLADLGIDQATEDFTCVGIGDMSGDVFGNGMLLSRHIKLVAAFNHRHVFVDPN PDPEASWQERRRLFNLPRSSWGDYDSSLISEGGGVWDRTLKSIPVSPHMHEALGIDASVN RMTPDDLISAILRAPVDLLWNGGIGTYVRATSETDAQVGDRANDPVRVTAKDVRAKAAGE GGNLGWTQAGRIEYARNGGRINTDFIDNSAGVDTSDHEVNIKILLDAEVAAGRISEQERD ELLPAMADDVASLVLRHNHSQNLALANALSSDGPTAGVLEAWMCELEESGHLDRAVDTMP STTEMNRRMAAGERLASPELCTLLAWTKIALCDAVLATDLPEDPFVADRLVGYFPPLLRE RFTERMPTHRLHREIITTEAVNRFVDSQGITAYYRLHLQTGADIAQVIRCQLAARSVFGL GRVETDLTHLGLDAVRTAKIRLALTDLAMHTTRWFLNHGGADDIAGTIETYRPGVATLVE KLSERLLGDSADAWQEKVDEVTELGLDRSDAAVVAAYDWSPVLLSIVEISEEGHSLDEVA DAYLTLARRVDMIRLTRLVEQLPQDRPTDARVRASLREDLLRVMSDATRRALVIGTDNVL ADGGRIVKSIAANPDLAHCVVMVSDLRSAVGQEVTL >gi|302034472|gb|GL383163.1| GENE 81 74609 - 75469 440 286 aa, chain + ## HITS:1 COG:BH2283 KEGG:ns NR:ns ## COG: BH2283 COG0613 # Protein_GI_number: 15614846 # Func_class: R General function prediction only # Function: Predicted metal-dependent phosphoesterases (PHP family) # Organism: Bacillus halodurans # 4 250 8 255 290 181 43.0 2e-45 MRIDLHTHSTISDGTDSPTRLMMKAAGSGLDVVALTDHDTFDGLEEAQAAGQRFGVRLLP GFEMTCHIGGRDVHLLGYGARPDDPVLGRELQATRASRAGRLDAICQRLSDAGMTVTIDD VHRTSGSASSLGRPHVADAMVAKGYVEDRDEAFRDWLSDGKPAYVPRRSVALEEGIDLIH NAGGVAVLAHPWGRGAQQDLTPQVIASLSAYHQLDGIEVEHQDHDQVARRMLFDLGGRLG LVRTGASDYHGSGKKDHQLGCNVTRETAYRELVTRIQLRGGVLRVR >gi|302034472|gb|GL383163.1| GENE 82 75616 - 76707 1061 363 aa, chain + ## HITS:1 COG:DR1093 KEGG:ns NR:ns ## COG: DR1093 COG0180 # Protein_GI_number: 15806113 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Tryptophanyl-tRNA synthetase # Organism: Deinococcus radiodurans # 38 361 25 348 351 218 45.0 1e-56 MTSDVPGIGSNAATLARSQARSDKVEADLAVHPDKWRILTGDRPTGSLHIGHYFGSLANR VRLQSKGIESFLVVADYQVIYDRDGVGDLQANVMSNVADYLAIGIDPALTTIFTHSALPA LNQLLLPFLSLVTDAELRRNPTVKDELATSERPMSGLMLTFPVHQAADILFCKANLVPVG RDQLPHIEQTRVIARRFDERYGRAEASKPVFPEPEALLSATPHVLGLDGTKMSKSKGNAI ELGMTADQTAKLIKKAKTDADRHITWDPENRPEVSNLLLLTALCEHDDPATIAEEIGDGG SGTLKKRLTASLNDYFAPIRERRAELAADEGHLREVLRDGNAKAAAVADQTLAEVREAMK MVY >gi|302034472|gb|GL383163.1| GENE 83 76771 - 78279 1116 502 aa, chain - ## HITS:1 COG:ECs2057 KEGG:ns NR:ns ## COG: ECs2057 COG1113 # Protein_GI_number: 15831311 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Escherichia coli O157:H7 # 41 489 40 490 516 412 48.0 1e-115 MTHTTQRSHEGNPQGPKVTATRDDPRAATIEEIQPIVDRGDQGYAETLTNRQVQMMAIGG AIGVGLFLGAGSRLRSAGPAVLISYAFCAVIAFLVMRALGELVIHRPSSGSFVSYARELL GDRWAYAVGWMYMLNWMTSGIAELTAIGTYLQFWWPSLLMWVPSLVALMILVSVNLISVK AFGEFEFWAALLKVVALTAFIIVAIGLVASHVNVGGHRAAVSNLWRFDGGFAPQGVLPLI LVIQGVIFAYATIELVGTASGETQNPRKVIPKAVHAVVFRLVVFYLGSLALLAMLLPYKE YSADESPFVTAFSAMGVGWIGDAMNIVVITAAFSSVNSGLYATGRVLKSLAAAGEAPKFA GTLNRFKTPSGGILMTASVFLLGVGLEYVVPERAFEISINTAAVGVIWTWATIFWCQLVL RRQVNEGRITDSGFHMPGYPITGIFGIVSLAGVTALMVLDPQNRIVLAASLVYIAVMLVA WPAVKRNKARHPELNAQEDITF >gi|302034472|gb|GL383163.1| GENE 84 78421 - 80115 1244 564 aa, chain - ## HITS:1 COG:ML0811 KEGG:ns NR:ns ## COG: ML0811 COG0513 # Protein_GI_number: 15827355 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Mycobacterium leprae # 30 520 7 514 544 449 49.0 1e-126 MRGKMIDGVSNAYLRWSTPDVALNDVTRTTPGLDGPTHEEAKTLTETTVSVPTSFADLGV REDICQALEGVGIVSPFPIQAMSIPIAVEGTDLIGQARTGTGKTLAFGITILQRITLPGD EGWEELTTKGKPQALVMCPTRELALQVSKDISTAASVRGTRVLTVYGGVGYESQIDALKA GVDVVVGTPGRLLDLSQRKDLDLSHVRIVVLDEADEMLDLGFLPDVENLIGRTPASRQTM LFSATMPAPIMALARSQLRRPVHVRAEGADTQTTVPDTQQFVYQAHPLDKIEIIGRILQA NDVEKVIIFCRTKRACQRLSDDLDDRGFKTRAIHGDLTQVAREKALKKFRHGEATILVAT DVAARGIDVTGVSHVINHECPEDEKTYVHRIGRTGRAGAKGLAVTLVDWADVTRWKLINK ALNLELSEPVETYSTSPHLYTDLDIPEDAQGQIIDPEKAATEKKRRQHRHGHDGSHHEKA TRRHSRDASKDGDKARRKRIRRRNGKVVRGSSPNPVAQPPHQKANQNRHAANSNHHDIVA GPREARPRHRRARNALHNRPSNRL >gi|302034472|gb|GL383163.1| GENE 85 80246 - 80812 404 188 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4363 NR:ns ## KEGG: HMPREF0675_4363 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 188 36 223 223 356 100.0 3e-97 MALAPGLAERFLIVDRSAEIQRILAEVRTRLADRETLAEVEPLIGSVEEYVPAQDWSQVL LRDHIVVSLISDFLDRVEPNLEPQLRPRGGSFGPWLGRSTGNRVRWDAAMRQVLAAHQDK SGDSLFARRLVGEVLSVAQRLFARHQSLTSALTQAGGGEFDDLDLINEVMAGVLGAHDQR MIELGLEP >gi|302034472|gb|GL383163.1| GENE 86 80853 - 81080 237 75 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4362 NR:ns ## KEGG: HMPREF0675_4362 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 75 1 75 75 132 100.0 3e-30 MEIKIGIVNAAREVSIDAQESAETIEQQLRESLAQPNAVLTLTDAKGRKVLIPAHGIAYL DLGQPNSRQVGFGTL >gi|302034472|gb|GL383163.1| GENE 87 81102 - 81959 464 285 aa, chain - ## HITS:1 COG:lin1935 KEGG:ns NR:ns ## COG: lin1935 COG0631 # Protein_GI_number: 16801001 # Func_class: T Signal transduction mechanisms # Function: Serine/threonine protein phosphatase # Organism: Listeria innocua # 40 284 12 243 252 63 27.0 5e-10 MNKSDQSYTVTPGTAATLRVDLTDAAAARGDVACASHIGLRHETNQDAAALGIDGSGHHI VLVVADGVSSTEGAEECARVASHTARDYLAATMDQGLPINDDDTVTLFERTFQKAHEAVV SGSGPIGACTLAAAVATHDRIVVGNIGDTRTYWFPDDGDPIRLSIDDSMAQAQMDLGLSR EEAERGIGAHAITKWIGASATDVAPRVMAYKPQQSGWLLVCSDGLWNHVPDAGDFARLMA DLVSKAHTDDHGHASPAGVADGLIAYANNCGGHDNITVALWRRDS >gi|302034472|gb|GL383163.1| GENE 88 81981 - 82157 67 58 aa, chain + ## HITS:1 COG:no KEGG:PPA1321 NR:ns ## KEGG: PPA1321 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 58 1 58 58 98 100.0 8e-20 MFSAWTLGSRIVLTLVVCQWWMDIYRHVHSELFGARMCLIRMRQQLHFFISQAAAARK >gi|302034472|gb|GL383163.1| GENE 89 82227 - 85412 599 1061 aa, chain + ## HITS:1 COG:MT3296_1 KEGG:ns NR:ns ## COG: MT3296_1 COG0210 # Protein_GI_number: 15842788 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Mycobacterium tuberculosis CDC1551 # 20 695 19 700 803 189 30.0 2e-47 MCVMHGWDGLQTRVLADDAGTVLVMGGPGTGRTSVCLEIAARHVAFGGRLSEVLVLAQTR PSAQALRTALVRRLGGAHLDPQVMTVHALARRIVASPSKRLLTAPEQEFRMRELLAARDM SDWPEELRTCAGTAQFASDVRVMASRLRQEGCDPQDLTEAGTASGVPEWRVLGPFLADYL DVLDLEGSLDYAEAVHRARIALTRPGADVEVRSRIKLLICDDLTECDPSQVRLLAQIARC HVPCVLTADPDQTIYGFRGAVAERLDEVIDEFPDVSVHHLTTNYRNSQHIAEVVESLRTG MPVMPSSSRLRRRANHSTSTEAGTVAALRAPSITRLVRKIAGTLRHARVADGVAWRSMAV VTRHGGELDVIATILAAEGIPVLRSRDEYALSDIYAVTHILNALEMAVALASGAQPSARD VATLLANPLAGIDRSVIHRLETWCRLVRGVDVDWALLKELGADPTITAAGKSERTDDASR SEDASTAELDTVCEVYSVPPGLRALAQPLAVMTQRVQRAADLLRSGATCHEALWALWQGS SWAASLRSRAVAGDSTANRDLDGLCSLFDMAESAQTMAGIAGGQRLIEVVRQEQIPADRA RESDEDRDGVNVVTAHRIKGREFDVVTVCGLEEGNWPAGNHTGSLVRADRWSPDGLVAAP GWSENLRAETRLLLVACSRARHQLLLCSVDSAEEGKRPSGLVAGLSHIEDNADSLSFTSL TELVGELRRVIADESESPGVRAEAQALLDDLRNEEHHGRRLVPQADPATWWRQGVPRQAD MAGEIELSASHIGELLTCPRRWFMTRRAGASSGSALRASIGSLVHRICAGNMDQWSLPEA LAELEAAWPEIELSAEWQRSAELADAKAAVQRFDGWLQLRNRQLIGTEVRVDGTITVPSG TARVRGSIDRLERDAEGAYYVVDLKTGTSQSDEIKQSHRLQIGVYQAVVASGGVEAIGPA SVSGAELVHLRIGAGIGQANPKVDYQSGLVDVPWPDEAEPVDGCCNWVEASVDKALRIVT SGEYPAIANRGCGHCPARAGCPALVPMDPATVGSDRRRNVP >gi|302034472|gb|GL383163.1| GENE 90 85409 - 88627 873 1072 aa, chain + ## HITS:1 COG:Rv3201c_1 KEGG:ns NR:ns ## COG: Rv3201c_1 COG0210 # Protein_GI_number: 15610337 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Mycobacterium tuberculosis H37Rv # 1 779 1 794 821 324 35.0 6e-88 MTSLIGNAPVDGVDVAALLGIPISAEQERAVQAPLKPCAVIAGAGTGKTTVMAARVVWLV ASRLVSPEEILGLTFTNKATAELSERIESNLTRVGLLTSEQPRPTVATYDSFAGTLVNDY GAWDGISTGAHLITGARAYQLAAEVVMGLDKAPLAATHMGPTFIAQAVVKLAGAMASHDA SPGKVRRADARWRQMLLAAPTKRGGDRYADIDKWLSRVDEREELLDLVAAYQNLKKERGL VEFGDRMVQALHLVTHHPRVGEELRARYRVVLLDEYQDTSSAQADVLAALFSGPDSAHGM GHPVMAVGDPLQAIYEWRGAAASNILEFHRRFPNKEGTPAQVLSLATNRRCADQIINAAN VASEELRQTLSSAVESGDHDPADDRAEVAVGQPLVAPEGNRRGEVTVAAYPDWVKECQAC ADILVEAKERGTIARWSDAAILVRRNSDVADLYDSLTARDVPVRFANLSGLLRLPDIAMV VAHLRVLVDRQDDAAMATLLAAPRLGLSTDDLAMVYRRARALAKARAKDDGLDLDDVEIH LSDAVMEGRPGGHERLQCALKRVCAEIVEVDAHRADSPDDLVLRIEAITGLVDDMAADDP HRSAARRDHLDALWNAIREARRSDPTMTIAGIVTWLAAEEDVGDGLPRAATDDRDAVTVS TVHGAKGLEWPLVIIPDMAQGVFPSTSTPDNFTSEAAVLPSFARGDASDISHPLSGSVVD TKAYVAALKEDSQWAEARLAYVALTRAKERLVVSWHQWRPRRKGSLGPGRYADLLADMLG TVWPDFGERPDDDIQAGTPWPVFAKDVGHGLIDNTSRSVDDPGQADRVKAWRTDADTLLK DARRHIDLQDEVALPPRLTTSQIVRLHANPQAFRDDLRRPMPRPADRGAGIGTAFHEWVS QRLAPAEPIPLFDAEEIAELDEESITQEAVAVEPSGAENRALRSLCQAFEESRWAGATVL AVEKSFVMTIGQTVVRGRLDAVVADPDHPGDELVIDWKTSPPRSADPLQLSIYRLAWAQA RGIDPSRVRAVFHHVGANETISAEPLLDADQVAAILTASSSGNRPTKNASDA >gi|302034472|gb|GL383163.1| GENE 91 88664 - 89566 327 300 aa, chain + ## HITS:1 COG:Rv3199c KEGG:ns NR:ns ## COG: Rv3199c COG2816 # Protein_GI_number: 15610335 # Func_class: L Replication, recombination and repair # Function: NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding # Organism: Mycobacterium tuberculosis H37Rv # 6 281 8 309 313 140 38.0 3e-33 MNRISDSRIVGRPLLDRCHADRNDDKANRARWDDPAAQLLLIDPYDKVVMAHDRVVAVPT EGERDDQHDLLLGVVDGVPWFTRRTNEPRPEARSVRAVDLVPVDRELVMSAVAALAWHES NPLCPRCGQSTRVTSGGPARVCPQGHYVFPRTDPAIITAVLDDEDRIVLARQRSWEPHRR SVLAGFVETGEPAEHAVVREVAEETTLTITSACYIGSQAWPFPRSLMFGYVARATGTIDV GHDELAEASFLSRQEVSGQVNAGRLQLPPTLSIARALIDAWLEHRLPEPESGFDLSAPLR >gi|302034472|gb|GL383163.1| GENE 92 89597 - 91483 519 628 aa, chain - ## HITS:1 COG:Rv0629c KEGG:ns NR:ns ## COG: Rv0629c COG0507 # Protein_GI_number: 15607769 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Mycobacterium tuberculosis H37Rv # 7 625 10 572 575 249 38.0 1e-65 MTDLVPVAAGSRLEPFARAGVLEASDIHLANLVCRIGGETNCDVSLAIALSCRELRRGSV FWDPHEIANVVRQQILDPAIPDIETSDQAALFAELEWPPPGEWLSTLEASPVIAGRDDPL NRLPARLDDDLVYLEKYWQAEHDVARDLATLAADPPSQGPVSADDVVSSISNALAASGIM LDPAQADAAIAAIMHRVSVLAGGPGTGKTATVCALLAALQQADPHLGAVALAAPSGKAAA RLRDSVSQVSERMPDDLKPIVADATTVHSLLKWQGPGTSFGYDEQHKLPFGVVVVDEASM LSLPLAASLLSAIGPQTRLILVGDPGQLVSVDAGSVLADIVSSADALQAQLPVTILTCNH RSRGDIARLSEAVREGDKSTALDVLATAAGVTHDSPSPDSIATISGRRSITWIDADPASI TMADLPAVAEVIARTGARMLELAQASADAAALKLVDAHRLLCAHREGPYGVDEWSQRMVT VLSDVLPGVGQGRWVLGETAIVTHNLAQLGVNNGDCGVIVETRPVPTIALPGPGGVPRRL PCSLIPSLQPLQAMTIHKAQGSQFTDVTVVLPPPDSPLLSRELLYTAITRAREHLTVVGT RESVERAIDRANDRRSGIQRRWEESRTS >gi|302034472|gb|GL383163.1| GENE 93 91476 - 94712 869 1078 aa, chain - ## HITS:1 COG:MT0658 KEGG:ns NR:ns ## COG: MT0658 COG1074 # Protein_GI_number: 15840031 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) # Organism: Mycobacterium tuberculosis CDC1551 # 7 1073 4 1087 1094 476 36.0 1e-133 MTTNTSFDITQPLPQGTVLLAASAGTGKTWTISAVCAKAIATGLVHMENLLLVTFNRSAA RELRGRVYERLVNTRLLLAGAREPSDPCDWSLIRCGQAGLTRVESALDNFDRAVITTTHE FASRMLVELGVLSDHDPSSVLMTDLAPLATEVSDDHYLAQYLDCDRPPSVRDKRELSRDV AVKYGEVPIFSKDDADTPVQDVLWALSVREDVRRRSKSRSVHTFDDLIGDLVKALRDPYR GPLACATLAHRFGLVMVDEFQDTDPLQWEILRRAFHGHSNLWLIGDPKQSIYAFRGADIH AYQDAAQSASHVLHLDVNYRTDKPIVEAVNTLFSNAQLGHDISMELVTAHHQESRIKTAA TDGPRYHWSQPFQIRCLQAPAGAQLNTATSDQFVTEDLVNQVIMMLEGGTVVQDGDGLRP LRPTDIAILVRTRRRGAELATALSQAHQPAVFSGASPVWSSQAAEDLITLLEALENTDER LRTRLCLSDLIGATPADLAASDSRVRSDLAIDLARWSSTWTMTGVWGTVEAALHRPGVLV RLVSMAGGERYVTDLRQVAQKAHIAACEGRLTATATAAWIREQQQLAGDDEPRRLDSDQQ AVIIMTIHEAKGLGFPVVLLPDITNGWAPKQSINGPIVWHDGQRRVLDISSQGTDRSIAI ESHEEDERGENLRLLYVALTRARSAVRLWWSPCPLRHRWSAFQRLVEMDRTTGELGSGVA GTDPGTLPWLNSGPIATVIAPANQKLLTRSVSAQPRACVVPRTLTRPLDTAFARTSYSGL TANLHAAVSEPMTDGLIDEPVDDETVDDTAPGLCGLPGGTSFGTLVHTVLEYIDTAAIDL SSEVLSITRRALRMSPLPDVPPSELATSLEQVLHSDLGPLAPGMTLADFSPADRLAEMNF ELAMAQSGRSTTMTDLASLLCDPSLVPPDDPISGYGEILAHIPNGDQALRGFLTGSIDAV LRRPDGRHLVVDYKTNRIPGVHKLSPHMYDAHTMRTMMFSSHYPLQGLLYSAALHRFLAS SLPGYDPATHLGPIGYLFVRGMADRPVPDGDMPDGVFTWHPRPELIEAISERLGGLHD >gi|302034472|gb|GL383163.1| GENE 94 94709 - 97858 616 1049 aa, chain - ## HITS:1 COG:MT0659 KEGG:ns NR:ns ## COG: MT0659 COG1330 # Protein_GI_number: 15840032 # Func_class: L Replication, recombination and repair # Function: Exonuclease V gamma subunit # Organism: Mycobacterium tuberculosis CDC1551 # 25 809 25 877 1097 204 28.0 9e-52 MAGVVKVFHSWRCVSDAVVAALSEPTTDPFVRPILVAPGNAQSRSLLQSLARRHGIAAGI DTTTPLGLRERLEEDLLGVKRENDPWQPGSLALRICRVIENNSPGFEVVSAHLEASRRQG VPRATWTTARQAADAICALARDSHDVLNAWADGATPTTHQGDTDLAGDPLDPARAWWAPL WRTLLAEPCHVPDPVSRHQLLVDAILTQSRSEPPIVWFSSTTTAQHDVSLAEALSASHDV TIVHLDHGISGADPWRTFDRARSATTARWTSSSICTAQSAVTHRKELPTVEIHQCHGVDR QAEVVRDVVCAALADYPTLEPRDIVVICCGRQDTAHLLSAGTLADIDHPAHQLRFTTPPQ REHVNPVTEAVTTILGLASSRATGQDLLSLCAMPAVQTRFGFSDDDQEAIERLVSQADIR WGVAPAARDKAGLGRIKQSTWLAGIERMILAIAMSSTPPTYLGTVTPITDVGSTTIPLVG KLAELVSRMRKAFLDTETPAPIATWKRRVSQIVDNLAAAPADAPRSALQTLALLTGLEGV AEDREFDRQEIIDLLNWLSGIHRGRHSWFDGSIQVCRPGELTPVDHEVVIVVDPDQEAVH ADLLQGLRDENLDPAAKARQDLLDVALSARTLLVVVRQARSPVSNLTVLPGPFTRTLSQA LKAQSATPRCVKHGLQPFSADEFSHHSDTAWSGFDNTAAAAAGCHPGSQPRPHRVVLPPV AKLPESRMSLIDLTLALSHPARTLLRARAGAPANERSTDLPVDLPLAPSSLDKYWIRSRI LADLEHGFLLDDAINAERLRGSTPPGHLGQHIVTKLAEDAMQICQRANRLRGDQDEQFIE IDFDLDEGNSPPLLWPDELIVDPMHPVHLHGRVGVRNHQIVHAVASRANARPLLDLWVDL LAVTVATDEPGWFGVLVPNGDVLRMASPAPDHARDILAGLARVAWWSNQQLIPLPVKLAH ALVELSPMAHNDYRTGASALQVQWSREWDPNWAAFLGTDVGELIACCHELGTTLTELSEW LFDPIKQALRGAGSSPSTMAQFSNSGRRA >gi|302034472|gb|GL383163.1| GENE 95 97983 - 100103 667 706 aa, chain + ## HITS:1 COG:Cgl0755 KEGG:ns NR:ns ## COG: Cgl0755 COG0210 # Protein_GI_number: 19552005 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Corynebacterium glutamicum # 22 698 4 675 678 410 39.0 1e-114 MLLSVTTLMVIAVRTRTADAILAALDPEQVKVAKTFDVPVCVIAGAGTGKTRAVTHRIAY GAVTGKLDPRRTLAVTFTTKAAGTMRGRLADLGVVGVQARTIHSAALRQIKFFWPRAYNC ELPPVSDSRFSMVAETTHRIGLGNDKALLRDLSAEISWAKVSNVPTDQYASLARAEGRVV AGVSATDVGRVLAGYEAVKRERCVIDLDDILLCAVGLLVQHRDITEEIRARYRHFVVDEY QDVSPLQHRLLELWFGDRNDVCVVGDPHQAIHSYAGARADYLLDFVADHPGAKRIDLVRN YRSTPEIVQLANEVLVNRMTPEEALEHGRGVTLVSRGRSGPEPIYQALGDDASEASAVAM WIESRHAAGIPWSEIAVLYRINSQAAQLETALAERSIPYLVKGSERFYDRGEVRRSLDAL ARLAADEPGADPLRAFDRILAAQGWSAIAPDGEGDVRQRWESLQALHDLTVSVVDDGTRT LEELAAVFSRRAATQEAPVGDGVTLATLHASKGLEWDVVALYGINDTMVPFIMAEAPAEV ASERRLLHVGVTRARRDLWVSYSWSGGNRDRQGISRFLRGLPGTGETTDKPPRHRRKRRA TITVCSVCGKALTAARDRKLGHHLACEVGVDPVLVERLRQWRSERAEADRVPAFVILTDA TLLGVAEKRPNSMKSLLQVPGIGRRKADLYAADLIKVLHGSSDNQQ >gi|302034472|gb|GL383163.1| GENE 96 100049 - 100318 149 89 aa, chain - ## HITS:1 COG:no KEGG:PPA1313 NR:ns ## KEGG: PPA1313 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 89 230 318 318 175 100.0 4e-43 MAMAARDPDWVTMARSMKEGEYDPAVTEWLVNRIERAALSIRDSTVSRRPKTFHVRTIAG ERSIEVPAQPGCHCWLSEEPCSTLMRSAA >gi|302034472|gb|GL383163.1| GENE 97 100418 - 100672 180 84 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4353 NR:ns ## KEGG: HMPREF0675_4353 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 84 1 84 84 160 100.0 2e-38 MTLLGHIAASEEGAGANNNDMNVKIGMPTDATKIAGVSGLRRSYPRCDVDATRCETPHQI VGTAMITDDRHSKIAGLGGYARFI >gi|302034472|gb|GL383163.1| GENE 98 100654 - 100908 139 84 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVQVVAHFPHGVARFFAGTYVSSQVLGKLRSCTLNLIVLGSRFQAGYASSLRMAGLSDCA ARRQAPMDMSKSRQKLRITYMKRA >gi|302034472|gb|GL383163.1| GENE 99 101134 - 101760 248 208 aa, chain + ## HITS:1 COG:Cgl0757 KEGG:ns NR:ns ## COG: Cgl0757 COG1451 # Protein_GI_number: 19552007 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Corynebacterium glutamicum # 22 185 2 159 162 111 40.0 1e-24 MMGVMADMAVPDEIIEARDGRPEIIIRRSARRRRTLSARMEGSSVLVMVPMGMRKADQDR QVMELVDKVTKSDARRRHHDSNDELTRRALRLCQKYLDPRVNDTVEPASVRWVSNQNSRW GSCTPSTGQIRLSDRMIGFPDWVVDHVLAHELCHLVEGHHNRRFHELLAGFPNAERAEGF LTGFQWAVSGEADNTRNDPDDNPADQSS >gi|302034472|gb|GL383163.1| GENE 100 101748 - 103109 824 453 aa, chain - ## HITS:1 COG:MT3287 KEGG:ns NR:ns ## COG: MT3287 COG5282 # Protein_GI_number: 15842777 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mycobacterium tuberculosis CDC1551 # 33 453 56 462 472 226 36.0 7e-59 MNDGPQNPGQPDPEEMAEQLRRMMQQLGLPVSGDLTSFMTQLSQMFGSGSSVGFGMPGTN PSDGPVDWSHIKDMARHITASHGPDPAPGQQERTVLLDASRLAESWLDRECEFAQVNVQP ACWSRAEWIEHTFSSWQSVVEPVLVSLTEAMTGLMSPGGPNDPMAALTQMMGPVLRRMSA MLYGAQLAQGLAELSTSTVTGSEIGLQVLSVPQVVILPTNIAAAWNDLDLDPRDVELYLV LRESARQRLFNAVSWLGPQLLALVEHYAREIRIDSSAIEDAIDIDDLSQLTPEKAQEMSE RLRGRLFEPTRTPEQDGVLQRLETLLALIEGWVDEVTFQVARTWLPSHDQLAEAVRRRRA TSGPAEVFFQSLLGLELRPRRVRDAVNLWAALREARGTVGRDHVWNHPDLVPTAADLDDP LGYVSGDRQDPSEGGDDLDAELEKLLRDHGHDD >gi|302034472|gb|GL383163.1| GENE 101 103205 - 104344 584 379 aa, chain + ## HITS:1 COG:ML0643 KEGG:ns NR:ns ## COG: ML0643 COG3480 # Protein_GI_number: 15827268 # Func_class: T Signal transduction mechanisms # Function: Predicted secreted protein containing a PDZ domain # Organism: Mycobacterium leprae # 39 379 7 340 340 150 34.0 5e-36 MSEPTTPTSQAHDSGASANVIATVETEIRQTVRFPTRWTAISSALVVLLCVLALILVPIP FVARSPGQTVNLLSTNERGKPMIQVDGLTTRHGEGEMRMTTVSITRADSRLSMAEALVAH LRADHDVLQREAIYPPGRSPQQVDADESYMMDTSERDAAVAALRAAGQPVTEMPMVSAVS AAGPAHGKLAPGDLIEKVDGKPMASVLDVGKAVRKHTVGDTVVFVVLRNSSVKTIAVTTV SSVSDRRAPAVGVTIDTGYRYTPTITYNIPGDIVGPSAGLAMALSIYQMVAPNDLIGSLR IAGTGGISPDGNVVAIGGIQEKIAGAERDGAKIFLVPAGNCRDISGVETSMRLVKVSSLK DAIAAIQKIRAGGTGIPHC >gi|302034472|gb|GL383163.1| GENE 102 104362 - 104904 259 180 aa, chain + ## HITS:1 COG:no KEGG:PPA1309 NR:ns ## KEGG: PPA1309 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 180 1 180 180 323 100.0 1e-87 MTQDPQVAQGVSESADDALIACLTEIERFVASSSWGGPPRLFALVRTVDLVKAEPALAGQ LAIGSHDSLSSIEQDDFRPGEDLAQALATTTWGDAVDGAAICVERIFLPDDCADEIPHDP EKAAAFVAAHPKRQEVRVVAGALRDGSHYGVARLVEHPDELLGSIDLVPALESAVLETLR >gi|302034472|gb|GL383163.1| GENE 103 104975 - 105565 244 196 aa, chain + ## HITS:1 COG:no KEGG:PPA1308 NR:ns ## KEGG: PPA1308 # Name: not_defined # Def: putative universal stress protein UspA # Organism: P.acnes # Pathway: not_defined # 1 196 1 196 196 385 100.0 1e-106 MTDHQPVHEQVRVQDQTDHGPRRTPGRYQRSPRGTMKCRPVIVAIMPGIPKPVLETGVEY AKAMGSKIVFAHVATDRVSSPSNPDTSHPLDPTAQRISMETAKSAIYSALDAFMSDYPEA DWELVYLSGLPDQQLAHLAHTINAGCFVLGTRRPGFRAGVQEWLDGSVAVQLGRRQLRPV IIVPLRGEDWKHPLCS >gi|302034472|gb|GL383163.1| GENE 104 105955 - 106440 151 161 aa, chain - ## HITS:1 COG:no KEGG:PPA1307 NR:ns ## KEGG: PPA1307 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 161 1 161 197 331 100.0 6e-90 MWRGYSWPRRSMHHSSAEIDLDSSVLVPKVASFEDEGGDKFVELIDVEGSVHSGGELGGY GVVDVGDRASDTEGKGMQMNFSTWLHVRLGTLEIQTMDLHRRFSRFSTTSNPTYPPKLFR QSCHACGRTHGAHSFPLPIGCKRCRAEHSEQGLQDESIRRH >gi|302034472|gb|GL383163.1| GENE 105 106422 - 106637 138 71 aa, chain + ## HITS:1 COG:no KEGG:PPA1306 NR:ns ## KEGG: PPA1306 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 71 1 71 71 126 98.0 3e-28 MNSHATSWPRIHKLTKKLRVPISIDINGLYMSITEASVARNVHYFSPVSADDLIRDSIEQ MAAKQRRKNQR >gi|302034472|gb|GL383163.1| GENE 106 106784 - 107146 206 120 aa, chain - ## HITS:1 COG:no KEGG:PPA1305 NR:ns ## KEGG: PPA1305 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 120 1 120 120 162 99.0 3e-39 MTDELDAELAAWAESDAPVTVPGRILRGAAARAAGRRALAWAGYPNVEAGRITRAGTGRS QTGNLRHRQVRLDVVTDARLDDLATKTGRKPADIMRSAISAYLDAAGDTTVYLRDKSRER >gi|302034472|gb|GL383163.1| GENE 107 107287 - 107445 118 52 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4344 NR:ns ## KEGG: HMPREF0675_4344 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 52 1 52 52 74 90.0 1e-12 MTPQRRTIFTARIILKRSAKKHRFTEADVLYEMRNALTVEEDFEASRVPKTW >gi|302034472|gb|GL383163.1| GENE 108 107622 - 108011 129 129 aa, chain + ## HITS:1 COG:no KEGG:PPA1304 NR:ns ## KEGG: PPA1304 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 129 42 170 170 233 100.0 3e-60 MTPHQVSTGSSLLSVLVIRGRSCRIGGSIRARGGSVIPLPLITTGGVRTVARCRSRTTSY VGRQYRQAAVLDFNYGSPARHGAESGAAIFLHYATRYTAGCVSMDSLSKLTNTLRWIDPA QNPKIIILG >gi|302034472|gb|GL383163.1| GENE 109 108097 - 108318 139 73 aa, chain + ## HITS:1 COG:no KEGG:PPA1303 NR:ns ## KEGG: PPA1303 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 73 1 73 73 124 100.0 8e-28 MRAVRMMSEGLRPVSAALLCPSWLASGADRGVDAAVQDHPADSAHACAFRQGQPRHRFGR VGANLGAVLAEFS >gi|302034472|gb|GL383163.1| GENE 110 108420 - 108737 223 105 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|282853735|ref|ZP_06263072.1| ## NR: gi|282853735|ref|ZP_06263072.1| hypothetical protein HMPREF9206_1666 [Propionibacterium acnes J139] conserved hypothetical protein [Propionibacterium acnes J165] hypothetical protein HMPREF9206_1666 [Propionibacterium acnes J139] conserved hypothetical protein [Propionibacterium acnes J165] # 1 105 1 105 105 153 100.0 5e-36 MTPVALPSIADLDHAVNNLTDALITATDATETSTDSGWYIESAIEELRTALTEVASLSRA AGAPASLLAGASRAWQAGQVELIETSGQVADNLIGWLAVHPEKAA >gi|302034472|gb|GL383163.1| GENE 111 108734 - 109039 189 101 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|289425057|ref|ZP_06426834.1| ## NR: gi|289425057|ref|ZP_06426834.1| hypothetical protein HMPREF1034_0478 [Propionibacterium acnes SK187] hypothetical protein HMPREF1034_0478 [Propionibacterium acnes SK187] # 1 101 116 216 216 166 100.0 4e-40 MNGPTGEGNNGCEEILAFIVVGIGGIALLKKMAPKIIGHLGAWLRDHGLLGVPGQGLFDL GLLGSVSASHLVVAVGVLIVVGALGTWFAGWVFARGSRGCR >gi|302034472|gb|GL383163.1| GENE 112 109147 - 109692 463 181 aa, chain - ## HITS:1 COG:no KEGG:PPA1300 NR:ns ## KEGG: PPA1300 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 17 181 1 165 165 264 98.0 1e-69 MVESKGSASSQLPGVPVHLYRAVLTHTDIQITVRIWSTTDHDWTWTPLDTWTPDPTPTTP AQLADELHRHGWTTPEDPTTLTKVTVIPENWQALVDHALAARNHQANQLRVAENILTDIL GDAADAGLSVTFLAQAAGLSRAAFYKRSAKTINSMRHADQPREDPSQLTRAEKTALSLGD E >gi|302034472|gb|GL383163.1| GENE 113 109707 - 110288 431 193 aa, chain - ## HITS:1 COG:no KEGG:PPA1299 NR:ns ## KEGG: PPA1299 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 193 1 193 193 358 100.0 1e-97 MTSDIDIDRTHKPDDRAEAPLYRSWARRLVHVSGMPWRIVAALAGVSPTSMHRLLFGRNG RPVEWIGINDARALMDIGIDDLASASTDRIPARESRELLVALHTLGWTDEHLSRWLTSSD LDLATTPKALYVTRLSAARIQATYDMLISQPVRRCGHPRTPPISSQTPVTSPQPGPEDAE TFQPALFELADCA >gi|302034472|gb|GL383163.1| GENE 114 110305 - 110820 225 171 aa, chain - ## HITS:1 COG:no KEGG:PPA1298 NR:ns ## KEGG: PPA1298 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 171 31 201 201 332 100.0 4e-90 MVSPCFCAFIDEGATAGVDVRNHSHFFNKSITTVSPLPKCVNHDLHIWGMIEPTTISTTP RVAIISPSGPARFWGEPPSIALRRHGRSPMRSLPSGALLLVWDVTVLTGPTLGHRVRPLS KDAELTARRWLDQVADNPGFLDTLIEAARITDGWHHATPPHIQAPYRTLHQ >gi|302034472|gb|GL383163.1| GENE 115 110552 - 111196 440 214 aa, chain + ## HITS:1 COG:no KEGG:PPA1297 NR:ns ## KEGG: PPA1297 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 214 48 261 261 418 100.0 1e-115 MGDRPCRRSAMLGGSPQNRAGPLGEMMATRGVVEMVVGSIMPQMCKSWFTHLGRGETVVM DLLKKWLWFRTSTPAVAPSSMKAQKQGETMRINATRTPLPPVRTMTASQLKIGDLVAGHT ADGSYPFHVERADSYDGMVHLRLIEISHASGLTDEQHPGIESVHAPDEPVITLSRHFGVC SECGRLSPCPDELAERRLEKLWQGEAEEAVHTSA >gi|302034472|gb|GL383163.1| GENE 116 111193 - 111753 235 186 aa, chain + ## HITS:1 COG:no KEGG:PPA1296 NR:ns ## KEGG: PPA1296 # Name: not_defined # Def: putative permease # Organism: P.acnes # Pathway: not_defined # 1 186 14 199 199 353 100.0 2e-96 MIQESWEFSLSWHRSEITEIMAGHLRSALLIPIAAGVEAAIIWALRDWIICGNWPGQGEL AMIGAATLVVVAVIMVALEAHHWRTATWRSWQTTPDWHGGAYVAPPARRHGPMLMCVHAV PRTQGHGSQILTQVCQWADEHGLTLELKPSGPAAERFYKRFGFVKTSRRVMRRECLSGRA DPHKGV >gi|302034472|gb|GL383163.1| GENE 117 111823 - 112344 440 173 aa, chain + ## HITS:1 COG:no KEGG:PPA1295 NR:ns ## KEGG: PPA1295 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 173 1 173 173 300 100.0 1e-80 MPSYRTTPDGKDYRLVITVTDEVTTCVIERIREGTWVPVQTWNTDVTARTRAPERRLKIT ESAANHGWQVPADAWGPIRHNRIVVKTIHPTGWASVVADATRRRDEALAQLGTIDLAWRD VLADAAAIGHLPATTIAEAAGVSRGRVYQLREEQRERMNALDAGRSLAQRRKP >gi|302034472|gb|GL383163.1| GENE 118 112341 - 113874 1108 511 aa, chain + ## HITS:1 COG:no KEGG:PPA1294 NR:ns ## KEGG: PPA1294 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 511 1 511 568 986 100.0 0 MRDDQEQRRPAPHRPPDPETVWLDIDTARGVDAAGNEILPVLGGRRTKHATLSDLLTTAL HHNARRLIVCGNIPDQPQSWLLPDTPAHTREFNQDWHVRGLFMLSGRPARGRFTHKETDR NLDILVADEWFPGQTLTPIQARWAWRELTHIIATRIDRDWALMDRPGAEGINLWKLRTPE SYRMEPMDPELGALIQHTSPQHRYELCVDDGNPEDREKGWRPTVPAGPIPNFVYIDGRFM YAGSVTGEIGAAPATLLSATEARDLFTNNPWHPARYHIRFTVPSWWDDIGLLPVKRTKGR AGWFWPNVPGTTHETWVDTAELKLAIDEGWDTEAGPDGPITQPIEFLEGIKLTKVDPIRG WVKTIQDMIDIAEKRWADKNPTATTILTSALKNMLRVTIGQMSASNPVTTTVVYDADDIP SDIEGFDVIRNKTGDTIAYQYQTARRRPDPDTWHPEIAARIWALSRVRTLNTPIADPTTG KNATTKGGALRMNSRTLLAIHGDAIYTSNVP Prediction of potential genes in microbial genomes Time: Wed Jul 20 20:23:31 2011 Seq name: gi|302034471|gb|GL383164.1| Propionibacterium acnes HL005PA4 genomic scaffold Scfld22, whole genome shotgun sequence Length of sequence - 246676 bp Number of predicted genes - 235, with homology - 227 Number of transcription units - 106, operones - 59 average op.length - 3.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 117 - 170 16.2 1 1 Op 1 . - CDS 185 - 1744 876 ## HMPREF0675_4689 hypothetical protein 2 1 Op 2 . - CDS 1686 - 2012 140 ## PPA2356 hypothetical protein 3 1 Op 3 . - CDS 2027 - 3061 696 ## COG1472 Beta-glucosidase-related glycosidases 4 2 Op 1 . - CDS 3318 - 4751 232 ## COG0515 Serine/threonine protein kinase 5 2 Op 2 . - CDS 4812 - 6230 1074 ## COG1113 Gamma-aminobutyrate permease and related permeases - TRNA 6500 - 6575 88.5 # His GTG 0 0 - Term 6416 - 6460 1.0 6 3 Op 1 . - CDS 6657 - 7274 577 ## COG1949 Oligoribonuclease (3'->5' exoribonuclease) 7 3 Op 2 . - CDS 7329 - 8456 731 ## HMPREF0675_4682 transporter, major facilitator family protein - Prom 8659 - 8718 78.5 + TRNA 8642 - 8717 75.7 # Arg TCT 0 0 + Prom 8643 - 8702 78.0 8 4 Op 1 . + CDS 8795 - 10105 1125 ## PPA1640 hypothetical protein 9 4 Op 2 . + CDS 10128 - 11993 1221 ## PPA1639 putative ABC transporter 10 4 Op 3 . + CDS 11990 - 13600 929 ## HMPREF0675_4678 hypothetical protein + Term 13661 - 13706 1.4 11 5 Op 1 3/0.000 + CDS 13719 - 14180 298 ## COG0629 Single-stranded DNA-binding protein 12 5 Op 2 . + CDS 14302 - 15987 1858 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains 13 6 Op 1 . - CDS 16020 - 16463 70 ## gi|315079630|gb|EFT51623.1| conserved domain protein 14 6 Op 2 . - CDS 16354 - 16833 225 ## COG1695 Predicted transcriptional regulators 15 6 Op 3 . - CDS 16915 - 19788 1216 ## COG0277 FAD/FMN-containing dehydrogenases 16 6 Op 4 . - CDS 19793 - 20323 335 ## COG1846 Transcriptional regulators + Prom 20344 - 20403 2.0 17 7 Op 1 . + CDS 20553 - 22382 1215 ## COG1022 Long-chain acyl-CoA synthetases (AMP-forming) 18 7 Op 2 . + CDS 22379 - 23224 356 ## HMPREF0675_4670 acyl-CoA thioester hydrolase, YbgC/YbaW family 19 8 Op 1 7/0.000 - CDS 23232 - 23939 323 ## COG0366 Glycosidases 20 8 Op 2 . - CDS 23994 - 24905 808 ## COG0366 Glycosidases - Term 24932 - 24965 2.1 21 9 Op 1 . - CDS 24981 - 26429 977 ## COG0362 6-phosphogluconate dehydrogenase 22 9 Op 2 . - CDS 26422 - 26559 61 ## gi|313793873|gb|EFS41897.1| hypothetical protein HMPREF9575_00166 23 10 Tu 1 . + CDS 26621 - 26848 226 ## HMPREF0675_4666 hypothetical protein - Term 26862 - 26916 19.3 24 11 Tu 1 . - CDS 26924 - 29536 1900 ## COG0308 Aminopeptidase N - Prom 29575 - 29634 4.7 + Prom 29572 - 29631 1.6 25 12 Op 1 . + CDS 29872 - 30018 76 ## HMPREF0675_4664 hypothetical protein 26 12 Op 2 . + CDS 30054 - 32276 1489 ## COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) 27 13 Tu 1 . - CDS 32360 - 33649 891 ## COG4552 Predicted acetyltransferase involved in intracellular survival and related acetyltransferases - Prom 33757 - 33816 1.9 28 14 Tu 1 . + CDS 33716 - 34189 410 ## COG0698 Ribose 5-phosphate isomerase RpiB + Term 34359 - 34394 6.7 29 15 Tu 1 . - CDS 34178 - 34417 205 ## HMPREF0675_4660 hypothetical protein 30 16 Op 1 . + CDS 34416 - 35315 429 ## COG0266 Formamidopyrimidine-DNA glycosylase 31 16 Op 2 . + CDS 35340 - 36686 420 ## PPA1622 hypothetical protein 32 17 Tu 1 . - CDS 36830 - 37045 67 ## 33 18 Op 1 . + CDS 36954 - 40199 2591 ## COG1190 Lysyl-tRNA synthetase (class II) 34 18 Op 2 . + CDS 40242 - 41183 476 ## PPA1620 putative poly(3-hydroxyalkanoate) depolymerase (EC:3.1.1.-) + Term 41191 - 41240 5.2 + TRNA 41275 - 41350 88.2 # Pro TGG 0 0 35 19 Tu 1 . - CDS 41382 - 41591 97 ## 36 20 Tu 1 . + CDS 41949 - 43412 883 ## HMPREF0675_4652 hypothetical protein 37 21 Op 1 5/0.000 - CDS 43566 - 43814 183 ## COG0210 Superfamily I DNA and RNA helicases 38 21 Op 2 3/0.000 - CDS 43817 - 45820 973 ## COG0210 Superfamily I DNA and RNA helicases 39 21 Op 3 . - CDS 45813 - 47717 887 ## COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster 40 21 Op 4 3/0.000 - CDS 47698 - 52167 2388 ## COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster 41 21 Op 5 6/0.000 - CDS 52164 - 55592 2269 ## COG1002 Type II restriction enzyme, methylase subunits 42 21 Op 6 6/0.000 - CDS 55652 - 56788 786 ## COG1002 Type II restriction enzyme, methylase subunits 43 21 Op 7 1/0.050 - CDS 56775 - 58742 1018 ## COG0553 Superfamily II DNA/RNA helicases, SNF2 family 44 21 Op 8 . - CDS 58739 - 59650 749 ## COG0553 Superfamily II DNA/RNA helicases, SNF2 family 45 21 Op 9 . - CDS 59714 - 59995 161 ## HMPREF0675_4645 hypothetical protein 46 21 Op 10 . - CDS 59811 - 60260 91 ## PPA2360 hypothetical protein - Prom 60435 - 60494 76.9 + TRNA 60420 - 60493 81.2 # Gly TCC 0 0 47 22 Tu 1 . + CDS 60749 - 62341 1899 ## COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) 48 23 Op 1 . + CDS 62446 - 63747 1068 ## COG0628 Predicted permease 49 23 Op 2 5/0.000 + CDS 63823 - 64461 676 ## COG0740 Protease subunit of ATP-dependent Clp proteases 50 23 Op 3 24/0.000 + CDS 64397 - 65158 772 ## COG0740 Protease subunit of ATP-dependent Clp proteases + Prom 65200 - 65259 2.1 51 23 Op 4 . + CDS 65347 - 66636 242 ## PROTEIN SUPPORTED gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 + Term 66643 - 66680 4.7 52 24 Tu 1 . - CDS 66639 - 66884 60 ## gi|313763512|gb|EFS34876.1| conserved domain protein 53 25 Tu 1 . + CDS 66772 - 70032 2065 ## COG0793 Periplasmic protease + Term 70071 - 70113 12.5 54 26 Tu 1 . - CDS 70150 - 74115 2383 ## HMPREF0675_4636 F5/8 type C domain protein - Term 74254 - 74292 7.0 55 27 Tu 1 . - CDS 74342 - 76954 2399 ## COG0525 Valyl-tRNA synthetase - Term 77014 - 77064 3.4 56 28 Op 1 . - CDS 77095 - 77892 843 ## COG1651 Protein-disulfide isomerase 57 28 Op 2 . - CDS 77977 - 78471 459 ## HMPREF0675_4633 putative type IV conjugative transfer system protein TraL 58 29 Op 1 4/0.000 - CDS 78637 - 79371 203 ## PROTEIN SUPPORTED gi|163781723|ref|ZP_02176723.1| 50S ribosomal protein L13 59 29 Op 2 5/0.000 - CDS 79368 - 80300 587 ## COG3429 Glucose-6-P dehydrogenase subunit 60 29 Op 3 . - CDS 80310 - 81755 968 ## COG0364 Glucose-6-phosphate 1-dehydrogenase 61 30 Tu 1 . + CDS 82013 - 83122 904 ## COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor) 62 31 Tu 1 . + CDS 83236 - 84744 719 ## COG4409 Neuraminidase (sialidase) + Term 84826 - 84853 -0.9 63 32 Op 1 3/0.000 - CDS 84864 - 85745 625 ## COG1612 Uncharacterized protein required for cytochrome oxidase assembly 64 32 Op 2 45/0.000 - CDS 85742 - 86506 574 ## COG0842 ABC-type multidrug transport system, permease component 65 32 Op 3 . - CDS 86508 - 87257 301 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 66 32 Op 4 . - CDS 87286 - 89769 2433 ## COG3808 Inorganic pyrophosphatase 67 33 Op 1 2/0.000 - CDS 89933 - 90994 592 ## COG1609 Transcriptional regulators 68 33 Op 2 20/0.000 - CDS 91020 - 91925 1008 ## COG3833 ABC-type maltose transport systems, permease component 69 33 Op 3 19/0.000 - CDS 91925 - 93529 1366 ## COG1175 ABC-type sugar transport systems, permease components 70 33 Op 4 . - CDS 93630 - 94895 1409 ## COG2182 Maltose-binding periplasmic proteins/domains 71 34 Tu 1 . - CDS 95192 - 95395 128 ## 72 35 Op 1 3/0.000 + CDS 95309 - 95974 464 ## COG2345 Predicted transcriptional regulator 73 35 Op 2 12/0.000 + CDS 95971 - 97419 1447 ## COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component 74 35 Op 3 . + CDS 97472 - 98680 958 ## COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component 75 35 Op 4 . + CDS 98680 - 99003 285 ## COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 76 35 Op 5 4/0.000 + CDS 99010 - 99783 868 ## COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component 77 35 Op 6 19/0.000 + CDS 99780 - 101021 1037 ## COG0520 Selenocysteine lyase 78 35 Op 7 4/0.000 + CDS 101018 - 101518 386 ## COG0822 NifU homolog involved in Fe-S cluster formation 79 35 Op 8 . + CDS 101515 - 101871 460 ## COG2151 Predicted metal-sulfur cluster biosynthetic enzyme - Term 101869 - 101910 8.2 80 36 Tu 1 . - CDS 101945 - 103957 1431 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family 81 37 Tu 1 . - CDS 104397 - 104852 294 ## PPA1540 hypothetical protein + Prom 104727 - 104786 2.5 82 38 Op 1 . + CDS 104871 - 105275 296 ## COG2153 Predicted acyltransferase 83 38 Op 2 . + CDS 105334 - 106932 1415 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains 84 38 Op 3 . + CDS 107002 - 107556 569 ## HMPREF0675_4605 hypothetical protein - Term 107360 - 107396 3.1 85 39 Tu 1 . - CDS 107585 - 108256 484 ## COG0500 SAM-dependent methyltransferases 86 40 Op 1 . - CDS 108403 - 109233 388 ## COG3346 Uncharacterized conserved protein 87 40 Op 2 . - CDS 109312 - 109560 174 ## PPA1534 hypothetical protein 88 41 Op 1 3/0.000 + CDS 109735 - 110454 240 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 89 41 Op 2 . + CDS 110495 - 111268 722 ## COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH) + Term 111311 - 111365 16.3 90 42 Tu 1 . - CDS 111274 - 112008 403 ## PPA1531 hypothetical protein 91 43 Op 1 . + CDS 112123 - 112908 197 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 92 43 Op 2 26/0.000 + CDS 112935 - 113402 336 ## COG1585 Membrane protein implicated in regulation of membrane protease activity 93 43 Op 3 . + CDS 113483 - 114649 1134 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs 94 44 Tu 1 . - CDS 114847 - 115833 892 ## COG0385 Predicted Na+-dependent transporter 95 45 Tu 1 . + CDS 115866 - 116675 198 ## PROTEIN SUPPORTED gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 96 46 Op 1 . - CDS 116682 - 117284 389 ## COG0242 N-formylmethionyl-tRNA deformylase 97 46 Op 2 . - CDS 117351 - 118433 501 ## COG2706 3-carboxymuconate cyclase 98 46 Op 3 . - CDS 118358 - 118600 100 ## gi|314923771|gb|EFS87602.1| hypothetical protein HMPREF9603_00728 + Prom 118488 - 118547 1.6 99 47 Tu 1 . + CDS 118581 - 119339 224 ## COG0739 Membrane proteins related to metalloendopeptidases 100 48 Tu 1 . - CDS 119259 - 120206 520 ## COG0582 Integrase + Prom 120257 - 120316 3.1 101 49 Op 1 38/0.000 + CDS 120494 - 121345 1436 ## PROTEIN SUPPORTED gi|50842999|ref|YP_056226.1| 30S ribosomal protein S2 102 49 Op 2 24/0.000 + CDS 121380 - 122192 428 ## PROTEIN SUPPORTED gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts + Term 122236 - 122273 6.8 103 49 Op 3 33/0.000 + CDS 122377 - 123090 602 ## COG0528 Uridylate kinase 104 49 Op 4 7/0.000 + CDS 123123 - 123677 717 ## COG0233 Ribosome recycling factor + Term 123712 - 123755 8.5 105 49 Op 5 . + CDS 123833 - 124552 549 ## COG0575 CDP-diglyceride synthetase + Prom 124554 - 124613 1.9 106 50 Op 1 . + CDS 124636 - 124809 174 ## 107 50 Op 2 . + CDS 124803 - 125453 425 ## COG1495 Disulfide bond formation protein DsbB 108 51 Op 1 . + CDS 125613 - 126743 878 ## COG0820 Predicted Fe-S-cluster redox enzyme 109 51 Op 2 1/0.050 + CDS 126828 - 127274 425 ## COG0334 Glutamate dehydrogenase/leucine dehydrogenase 110 51 Op 3 . + CDS 127250 - 128164 885 ## COG0334 Glutamate dehydrogenase/leucine dehydrogenase + Term 128300 - 128357 -0.4 111 52 Op 1 . - CDS 128142 - 129233 793 ## HMPREF0675_4579 hypothetical protein 112 52 Op 2 . - CDS 129230 - 130603 773 ## COG1680 Beta-lactamase class C and other penicillin binding proteins 113 53 Op 1 17/0.000 + CDS 130691 - 131914 753 ## COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase 114 53 Op 2 . + CDS 131911 - 133191 709 ## COG0750 Predicted membrane-associated Zn-dependent proteases 1 + Term 133192 - 133234 -0.5 115 54 Tu 1 . + CDS 133494 - 133994 148 ## COG2374 Predicted extracellular nuclease 116 55 Tu 1 . + CDS 134108 - 134827 492 ## COG0819 Putative transcription activator 117 56 Op 1 2/0.000 + CDS 135014 - 136156 880 ## COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis 118 56 Op 2 . + CDS 136446 - 137003 329 ## COG3393 Predicted acetyltransferase 119 57 Op 1 42/0.000 - CDS 136997 - 137935 716 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 120 57 Op 2 . - CDS 138014 - 138706 298 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 121 57 Op 3 . - CDS 138703 - 139713 655 ## HMPREF0675_4569 actinobacterial surface-anchored protein domain protein 122 57 Op 4 . - CDS 139734 - 141257 968 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin 123 57 Op 5 . - CDS 141254 - 143896 1625 ## PPA1500 hypothetical protein - Prom 143936 - 143995 1.7 + Prom 143876 - 143935 3.8 124 58 Op 1 . + CDS 144066 - 145823 1407 ## COG0442 Prolyl-tRNA synthetase + Prom 145827 - 145886 3.5 125 58 Op 2 . + CDS 145984 - 147735 1032 ## PPA1498 hypothetical protein + Term 147763 - 147801 11.4 126 59 Tu 1 . + CDS 147821 - 148588 569 ## COG0730 Predicted permeases 127 60 Tu 1 . - CDS 148619 - 149581 569 ## PPA1496 hypothetical protein - Prom 149673 - 149732 4.7 + Prom 149617 - 149676 2.2 128 61 Op 1 32/0.000 + CDS 149710 - 150246 590 ## COG0779 Uncharacterized protein conserved in bacteria 129 61 Op 2 20/0.000 + CDS 150248 - 151219 616 ## PROTEIN SUPPORTED gi|17988250|ref|NP_540884.1| transcription elongation factor NusA + Term 151241 - 151284 4.4 130 61 Op 3 . + CDS 151299 - 151547 435 ## PROTEIN SUPPORTED gi|213961178|ref|ZP_03389457.1| LSU ribosomal protein L7AE 131 61 Op 4 . + CDS 151768 - 154662 2335 ## COG0532 Translation initiation factor 2 (IF-2; GTPase) + Term 154678 - 154730 15.0 + Prom 154709 - 154768 3.6 132 62 Tu 1 . + CDS 154831 - 155352 210 ## gi|332675921|gb|AEE72737.1| hypothetical protein PAZ_c15790 + Term 155395 - 155440 2.5 133 63 Tu 1 . - CDS 155291 - 155590 131 ## 134 64 Op 1 . + CDS 155442 - 156131 253 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 135 64 Op 2 . + CDS 156128 - 157300 559 ## HMPREF0675_4556 putative type IV conjugative transfer system protein TraL 136 64 Op 3 . + CDS 157297 - 157908 461 ## HMPREF0675_4555 hypothetical protein 137 64 Op 4 . + CDS 157989 - 158420 581 ## COG0858 Ribosome-binding factor A + Term 158498 - 158537 -0.2 138 65 Op 1 . - CDS 158484 - 159857 1139 ## COG0371 Glycerol dehydrogenase and related enzymes 139 65 Op 2 . - CDS 159860 - 160159 88 ## HMPREF0675_4552 phosphocarrier, HPr family 140 65 Op 3 6/0.000 - CDS 160156 - 160524 294 ## COG3731 Phosphotransferase system sorbitol-specific component IIA 141 65 Op 4 6/0.000 - CDS 160552 - 161601 1073 ## COG3732 Phosphotransferase system sorbitol-specific component IIBC 142 65 Op 5 . - CDS 161603 - 162181 512 ## COG3730 Phosphotransferase system sorbitol-specific component IIC 143 65 Op 6 . - CDS 162265 - 162768 387 ## PPA1483 sorbitol operon activator 144 65 Op 7 . - CDS 162768 - 164690 1311 ## COG3711 Transcriptional antiterminator 145 66 Tu 1 . + CDS 164433 - 165071 136 ## PPA1481 hypothetical protein 146 67 Op 1 . + CDS 165795 - 166121 406 ## COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain 147 67 Op 2 . + CDS 166174 - 167061 707 ## COG0130 Pseudouridine synthase 148 68 Tu 1 . - CDS 167215 - 167517 106 ## gi|314962063|gb|EFT06164.1| hypothetical protein HMPREF9614_00186 + Prom 167163 - 167222 7.0 149 69 Op 1 16/0.000 + CDS 167393 - 168700 1083 ## COG4175 ABC-type proline/glycine betaine transport system, ATPase component 150 69 Op 2 14/0.000 + CDS 168706 - 169572 988 ## COG4176 ABC-type proline/glycine betaine transport system, permease component 151 69 Op 3 . + CDS 169615 - 170622 1070 ## COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components + Term 170645 - 170684 4.4 152 70 Tu 1 . - CDS 170624 - 170830 136 ## 153 71 Op 1 9/0.000 + CDS 170774 - 171670 359 ## PROTEIN SUPPORTED gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 + Prom 171760 - 171819 1.6 154 71 Op 2 . + CDS 171910 - 172173 446 ## PROTEIN SUPPORTED gi|50842951|ref|YP_056178.1| 30S ribosomal protein S15 + Term 172190 - 172234 9.2 155 72 Tu 1 . - CDS 172179 - 172361 58 ## gi|314976668|gb|EFT20763.1| hypothetical protein HMPREF9566_01379 156 73 Tu 1 . + CDS 172494 - 174695 2504 ## COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) + Prom 174698 - 174757 3.4 157 74 Op 1 . + CDS 174863 - 175603 715 ## COG0289 Dihydrodipicolinate reductase 158 74 Op 2 . + CDS 175680 - 176435 382 ## PPA1469 hypothetical protein + Term 176467 - 176518 -0.8 159 75 Tu 1 . + CDS 176543 - 178282 1445 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 160 76 Tu 1 . - CDS 178334 - 178528 120 ## gi|313801400|gb|EFS42651.1| hypothetical protein HMPREF9576_02285 - Prom 178558 - 178617 1.8 161 77 Tu 1 . + CDS 178739 - 180412 1481 ## COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily + Term 180430 - 180458 -0.0 162 78 Op 1 . + CDS 180554 - 180739 334 ## PROTEIN SUPPORTED gi|213961153|ref|ZP_03389432.1| ribosomal protein L28 + Term 180761 - 180788 1.5 163 78 Op 2 . + CDS 180789 - 183038 1381 ## COG1200 RecG-like helicase - Term 183049 - 183087 -0.6 164 79 Tu 1 . - CDS 183143 - 183565 487 ## HMPREF0675_4531 pyridoxamine 5'-phosphate oxidase family protein 165 80 Op 1 14/0.000 + CDS 183702 - 184310 212 ## PROTEIN SUPPORTED gi|163764797|ref|ZP_02171850.1| ribosomal protein L29 166 80 Op 2 . + CDS 184307 - 184780 321 ## PROTEIN SUPPORTED gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 167 80 Op 3 . + CDS 184784 - 185041 153 ## gi|314919257|gb|EFS83088.1| hypothetical protein HMPREF9598_00087 168 81 Op 1 . - CDS 185124 - 185960 510 ## HMPREF0675_4526 hypothetical protein 169 81 Op 2 7/0.000 - CDS 186036 - 187751 1781 ## COG0747 ABC-type dipeptide transport system, periplasmic component 170 81 Op 3 44/0.000 - CDS 187843 - 188874 510 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 171 81 Op 4 44/0.000 - CDS 188871 - 189962 912 ## COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 172 81 Op 5 49/0.000 - CDS 189959 - 190891 951 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 173 81 Op 6 . - CDS 190894 - 191091 166 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 174 81 Op 7 . - CDS 191141 - 192019 586 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components - Prom 192093 - 192152 2.0 + Prom 191977 - 192036 4.0 175 82 Tu 1 . + CDS 192176 - 193744 902 ## HMPREF0675_4518 glycosyl hydrolase family 20, catalytic domain protein - Term 193430 - 193468 -0.5 176 83 Op 1 . - CDS 193704 - 194930 504 ## HMPREF0675_4517 hypothetical protein 177 83 Op 2 . - CDS 194927 - 198010 1967 ## COG0383 Alpha-mannosidase - Prom 198052 - 198111 2.5 178 84 Op 1 . + CDS 198363 - 198569 80 ## PPA1458 hypothetical protein 179 84 Op 2 . + CDS 198659 - 199669 672 ## COG1609 Transcriptional regulators 180 85 Op 1 38/0.000 - CDS 199690 - 200586 624 ## COG0395 ABC-type sugar transport system, permease component 181 85 Op 2 35/0.000 - CDS 200583 - 201539 778 ## COG1175 ABC-type sugar transport systems, permease components 182 85 Op 3 . - CDS 201619 - 202929 1347 ## COG1653 ABC-type sugar transport system, periplasmic component - Prom 203012 - 203071 2.4 + Prom 203087 - 203146 4.0 183 86 Op 1 . + CDS 203192 - 203752 175 ## PROTEIN SUPPORTED gi|170758590|ref|YP_001787770.1| ribosomal protein L32 family protein 184 86 Op 2 . + CDS 203816 - 204007 345 ## PROTEIN SUPPORTED gi|213961304|ref|ZP_03389583.1| ribosomal protein L32 185 86 Op 3 4/0.000 + CDS 204018 - 204758 308 ## COG0571 dsRNA-specific ribonuclease 186 86 Op 4 . + CDS 204751 - 205521 344 ## COG0266 Formamidopyrimidine-DNA glycosylase + Term 205632 - 205665 0.1 187 87 Tu 1 . - CDS 205545 - 205760 108 ## HMPREF0675_4506 hypothetical protein 188 88 Op 1 . - CDS 205918 - 206259 261 ## HMPREF0675_4505 HicB family protein 189 88 Op 2 . - CDS 206259 - 206471 155 ## HMPREF0675_4504 hypothetical protein 190 89 Op 1 . + CDS 206865 - 207524 562 ## PPA1448 GtrA-like protein 191 89 Op 2 . + CDS 207584 - 207751 82 ## HMPREF0675_4501 hypothetical protein 192 89 Op 3 . + CDS 207802 - 208992 660 ## PROTEIN SUPPORTED gi|163762490|ref|ZP_02169555.1| ribosomal protein L28 193 89 Op 4 . + CDS 209003 - 210184 881 ## COG0627 Predicted esterase 194 89 Op 5 1/0.050 + CDS 210260 - 211846 1518 ## COG0541 Signal recognition particle GTPase 195 89 Op 6 . + CDS 211923 - 213086 1013 ## COG1228 Imidazolonepropionase and related amidohydrolases 196 90 Op 1 19/0.000 + CDS 213277 - 213720 746 ## PROTEIN SUPPORTED gi|50842922|ref|YP_056149.1| 30S ribosomal protein S16 197 90 Op 2 . + CDS 213723 - 214001 168 ## COG1837 Predicted RNA-binding protein (contains KH domain) + Term 214015 - 214085 4.3 198 91 Tu 1 . - CDS 213995 - 214162 56 ## 199 92 Op 1 30/0.000 + CDS 214127 - 214648 211 ## PROTEIN SUPPORTED gi|163796730|ref|ZP_02190688.1| 50S ribosomal protein L19 200 92 Op 2 . + CDS 214651 - 215370 431 ## COG0336 tRNA-(guanine-N1)-methyltransferase 201 93 Op 1 . + CDS 215581 - 216231 618 ## PPA1439 succinate dehydrogenase cytochrome b-558 subunit 202 93 Op 2 36/0.000 + CDS 216231 - 218258 1875 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 203 93 Op 3 . + CDS 218255 - 219028 707 ## COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit + Term 219053 - 219099 16.0 204 94 Tu 1 . - CDS 219049 - 219246 84 ## gi|282854579|ref|ZP_06263914.1| hypothetical protein HMPREF9206_0031 + Prom 219111 - 219170 1.7 205 95 Op 1 5/0.000 + CDS 219279 - 219632 588 ## PROTEIN SUPPORTED gi|50842915|ref|YP_056142.1| 50S ribosomal protein L19 + Term 219650 - 219688 7.1 + Prom 219667 - 219726 1.8 206 95 Op 2 4/0.000 + CDS 219803 - 220627 474 ## COG0681 Signal peptidase I 207 95 Op 3 . + CDS 220636 - 221277 349 ## COG0164 Ribonuclease HII 208 95 Op 4 . + CDS 221274 - 221585 389 ## HMPREF0675_4486 protein often found in Actinomycetes clustered with signal peptidase and/or RNaseHII 209 96 Op 1 2/0.000 + CDS 221853 - 222272 368 ## COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase 210 96 Op 2 2/0.000 + CDS 222320 - 223792 249 ## COG0606 Predicted ATPase with chaperone activity 211 96 Op 3 . + CDS 223789 - 224922 235 ## COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake 212 97 Tu 1 . - CDS 225373 - 225588 274 ## HMPREF0675_4482 CsbD-like protein - Prom 225637 - 225696 2.8 213 98 Op 1 . - CDS 225805 - 226419 657 ## PPA1425 putative lysophospholipase 214 98 Op 2 . - CDS 226400 - 226942 454 ## COG2267 Lysophospholipase - TRNA 227516 - 227604 56.4 # Leu GAG 0 0 215 99 Op 1 . + CDS 227744 - 229108 1002 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 216 99 Op 2 . + CDS 229111 - 230418 921 ## COG0372 Citrate synthase + Term 230493 - 230536 1.3 - Term 230333 - 230363 -0.5 217 100 Tu 1 . - CDS 230430 - 231398 493 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 218 101 Op 1 . + CDS 231607 - 232188 266 ## HMPREF0675_4474 hypothetical protein 219 101 Op 2 . + CDS 232287 - 232985 331 ## HMPREF0675_4473 hypothetical protein 220 101 Op 3 . + CDS 233054 - 233725 519 ## COG3201 Nicotinamide mononucleotide transporter 221 101 Op 4 3/0.000 + CDS 233792 - 234058 289 ## COG0140 Phosphoribosyl-ATP pyrophosphohydrolase 222 101 Op 5 . + CDS 234116 - 234970 737 ## COG0040 ATP phosphoribosyltransferase + Term 235115 - 235176 0.9 223 102 Tu 1 . - CDS 235032 - 235649 362 ## PPA1416 hypothetical protein 224 103 Op 1 . + CDS 235716 - 236189 220 ## HMPREF0675_4468 hypothetical protein 225 103 Op 2 . + CDS 236149 - 236355 125 ## 226 103 Op 3 . + CDS 236378 - 237184 770 ## COG0290 Translation initiation factor 3 (IF-3) 227 103 Op 4 . + CDS 237273 - 237491 345 ## PROTEIN SUPPORTED gi|50842894|ref|YP_056121.1| 50S ribosomal protein L35 228 104 Op 1 4/0.000 + CDS 237595 - 237966 609 ## PROTEIN SUPPORTED gi|213961272|ref|ZP_03389551.1| ribosomal protein L20 229 104 Op 2 4/0.000 + CDS 237968 - 238789 181 ## PROTEIN SUPPORTED gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 230 104 Op 3 40/0.000 + CDS 238912 - 240021 946 ## COG0016 Phenylalanyl-tRNA synthetase alpha subunit 231 104 Op 4 . + CDS 240018 - 242537 1884 ## COG0072 Phenylalanyl-tRNA synthetase beta subunit 232 105 Tu 1 . - CDS 242779 - 244281 889 ## COG0502 Biotin synthase and related enzymes 233 106 Op 1 . + CDS 243958 - 244569 409 ## COG1309 Transcriptional regulator 234 106 Op 2 . + CDS 244665 - 245213 294 ## COG1438 Arginine repressor + Term 245225 - 245260 -0.7 235 106 Op 3 . + CDS 245297 - 246553 676 ## PROTEIN SUPPORTED gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 + Term 246572 - 246618 15.4 Predicted protein(s) >gi|302034471|gb|GL383164.1| GENE 1 185 - 1744 876 519 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4689 NR:ns ## KEGG: HMPREF0675_4689 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 519 1 526 526 916 98.0 0 MVGEARVLPPGWSQPAGQYEGWNGQYPQQGWDGQNPQQGWDPTQYPQQGWQTGQNPQGWD SHQGWDPNLQGWDGQPGAQIDDVQSTPAAAIGQGDVDNLQNDPNYYFDSNGERGPGWYGP SGAFFPATQAYEPNAQPDLSYMAEGTPAGTTGTDHEHISEPVGGIPFSDAPQPTRKSQYW IIAVAAILVVAIGAGIFFYLRSKSGATKAVPATASKPAASASKSPTPEVTVTSTSTATAG ATSVAPASATPMPSVPNDASTTPSPDLVRQLFNAPDAQVQWVSLAADGQNAAVAYASTFN INGKSAGPNGGHLVMRKNGSHWEPLSQGGVIVDDNDCDAMLKTLGDKAAVAASQVMNNKQ CDAAIVYDLAKASPIRLGEMAGVGPLNLDKSTSELASTIHVIPDGVGDGCTRNPTAYSRY GDLLGGVWTQGGKAQAYLFTGGNNATSNGARIGITEAQLRSDYSKLKLIDVSTEFSGIKL GFQKALAYSYHGKEIDYLFNGGKVVAYMIRNSDFSPTTC >gi|302034471|gb|GL383164.1| GENE 2 1686 - 2012 140 108 aa, chain - ## HITS:1 COG:no KEGG:PPA2356 NR:ns ## KEGG: PPA2356 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 99 1 99 608 160 100.0 2e-38 MTDDGSSKEKYPDDSHSGYNDAELTPEQPDSNSGQARDDEPAQELSQDREATQQFSTNPD DYDNQQYPQQSDYQNAQYPQDWNQYPQSGDGWGSESTAPRMEPASRPV >gi|302034471|gb|GL383164.1| GENE 3 2027 - 3061 696 344 aa, chain - ## HITS:1 COG:L100350 KEGG:ns NR:ns ## COG: L100350 COG1472 # Protein_GI_number: 15672482 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase-related glycosidases # Organism: Lactococcus lactis # 10 337 67 396 403 153 29.0 5e-37 MNPRAVEIAKKLSPEQRAGQCILVGVVPSDSPEYITNLIDTQCLAGIFLLGHWTSRSKLE AMLSAVNHVSPQGIKPIVATDHEGGEIQNIRVPGVDHLPSQEALARMSPAKVQAVVTTGA HQLAKLGVHMVFSPVAGVIDPRLGVRNKPIAKHHRGFGTDPHLCGQYSAAVVAGHRKAGI ISTTKHFPGIGRITEDTDFKSAGITDDKTTRHDRYLESFRMAFDAGSEAVMIASAYYSKI DPGTLGLFSSKIMTDMLRGDFGYQGLIVSDDLGSSVSVFSVDGGHRASKFVSAGGDLAIT ADPLLAGPMIRALTSTTTSASGKKRLVDAASHVINVKLAHSLTK >gi|302034471|gb|GL383164.1| GENE 4 3318 - 4751 232 477 aa, chain - ## HITS:1 COG:lin1934_1 KEGG:ns NR:ns ## COG: lin1934_1 COG0515 # Protein_GI_number: 16801000 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Listeria innocua # 13 278 5 275 342 127 32.0 6e-29 MSDEGVMGKSTTKRVGSHYVLDDVLGRGSMGTVWRGHDLNDGSPCAIKILNPTLTTDKGA TRRFIDERDIFMSVDDDAVVRVTDMVVESSTFAIVMELVDGPDLAQVLKSLPDHRLDQGT AVSLGIEVCQALAAIHRVGIRHLDIKPANILIEDPENVSGARITDFGVSEVVAFHGPREV AGTPYYQAPEVAAGWTPTAASDLYSFGVTLYEILAGHMPFQANSAGNLLRNQPPPAIPGV DPRLWNTILTCLAPDPSQRPDSAEVLASELRSWRNGEQPVRLVSRRSQPVRPTPQPMPRP RLVRSAPSAISGATPPAPSATSVATQQRGSGWVIALLAVLVLVGAGVFFYVKGMPGSHSD AAPQPTQAPISTSTPEVRPTRTVTAHATVTTMSSPIQIQLPGGAVECGQGAWIANPRTTC PLALEVVRSVPANHPASFAIDAQDPRTGKSRHFSCNTVGQYVDCGSQDLEVYLVIPG >gi|302034471|gb|GL383164.1| GENE 5 4812 - 6230 1074 472 aa, chain - ## HITS:1 COG:ECs5186 KEGG:ns NR:ns ## COG: ECs5186 COG1113 # Protein_GI_number: 15834440 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Escherichia coli O157:H7 # 9 459 13 463 470 525 61.0 1e-149 MTVKNQHSAAEEQHLRRSLSNRHIQLIAISGAIGTGLFMGSGKSISTAGPSIVVAYLVIG AMLFFVMRAMGELLLHNLQWKSFQDFAADLLGPWAGFFLGWTYWLCWVVTGMADVIAITS YWSFWTHDRAWAFILTATTLLLLLALNLLTVKLFGELEFWFALIKIVAILTLIAVAIVLI VMGFTSASGYKASVSNLWSYGGFAPRGWSGFFGGFQIAVFAYVGIELVGTTSAETANPPK TMPKAINAVPVRVLVFYVAALLAMMCVTPWNLIQTDSSPFVQMFGLIGFTAAAGIMNFVV LTSAASSANSGVYSTSRMLYGLAHKGMAPRAFGKLSRHGVPGWGLFCTIILIGSALILAA KDSVMGAFTLVTTVSAVLFVFVWSMILISHIVHVRRNPQAHAKSIYPMPGASFMPWVVLA FFVFVIVLLTGADDTLQALLAAPIWFVVLGIVWAIVRRRSHHDDLETDLPAD >gi|302034471|gb|GL383164.1| GENE 6 6657 - 7274 577 205 aa, chain - ## HITS:1 COG:ML0427 KEGG:ns NR:ns ## COG: ML0427 COG1949 # Protein_GI_number: 15827135 # Func_class: A RNA processing and modification # Function: Oligoribonuclease (3'->5' exoribonuclease) # Organism: Mycobacterium leprae # 1 197 1 198 215 221 55.0 7e-58 MKDMLVWIDCEMTGLDLAHDGLIEVAALVTDGQLNVQGEGVDVIIKPEPQWLDHMNDFVR NMHTTSGLLAELDKGLTMAQAQDQVLDYIRTYVPQAGKAPLAGNTIGTDRSFLAKDMPKL ESYVHYRNVDVSSIKELARRWYPRAFGHSPEKQGNHRALADIQESIEELMYWREVLMVPS PGPETTRCDEIAAKYQGFLTGAGRD >gi|302034471|gb|GL383164.1| GENE 7 7329 - 8456 731 375 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4682 NR:ns ## KEGG: HMPREF0675_4682 # Name: not_defined # Def: transporter, major facilitator family protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 375 29 403 403 572 99.0 1e-161 MSSLGYGAVIPLIPLTAVHIGASAALAAAIAALVGIGQIIGDVPAGWLVTKIGEKWSLVI AMLIDAVALVSMGLVHHLGLLAVAVFVNGMAGAVYGIARQNYLTVAIPYRYRARALSTLG GVFRVGWFVGPMAGSWILREASMSWAYGFASVASVLAAAVTTVMPDLPPVDVPQTAVDDA PTKISTWTIAKQNSKVLWTTGLGVTALMVVRSARRSLLPLWCHANGLSPATTDLIYAWSM AADVLLFLPGGALMDRFGRWWVAVPSIFIQALALLTLPLAHTATTIGIVALAIGIGNGAS SGIVMTLGSDASPNIGRPQFLAAWRLLSDTGSAMGPIVVTLVTLAWPLSAASIVMSIIGL VGSYWMGRWVPHGKR >gi|302034471|gb|GL383164.1| GENE 8 8795 - 10105 1125 436 aa, chain + ## HITS:1 COG:no KEGG:PPA1640 NR:ns ## KEGG: PPA1640 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 436 1 436 436 822 100.0 0 MSYVAPTPIARRPWWQRALRNPWFWVLLALVLISAACMVHTYVIVHADTEVEQQGQKGVI PGITNQSLKLAFHYAWPTAAVWSAIFIFLDRFRTRHLHVWFLCFCWGACVATWISMHVNT WMAGMLSVTGGVDPASGAGPAVYSAPFVEESCKALVLFALAIGMGRRMTSVVQTVSMAGL SAIGFAFVENIMYYARADNYARVTASAGDPKQAVMELVLLRGVYASFGHPLFTSMTGIGL ALGLRSRSRLVRIFAPTTGFVMAVVGHMLFNGFSSVLPMAILKKLWFVALGIVASVVVFL VVRTVREGRMIRYRLEDYVKGGWLPNSDADTLSALRRRQWAALVALSQGPRRWWHTLEFL RVGTDLAYLRDAIVRGLDDDPGPRQIELINRMNVLRPAAITVARGAKLSKPRLPAFLKRR RNQPVNNELQWAPPQA >gi|302034471|gb|GL383164.1| GENE 9 10128 - 11993 1221 621 aa, chain + ## HITS:1 COG:no KEGG:PPA1639 NR:ns ## KEGG: PPA1639 # Name: not_defined # Def: putative ABC transporter # Organism: P.acnes # Pathway: not_defined # 1 621 1 621 621 1125 100.0 0 MNTEQILLSLTDLRHNLRQAQFPLDLPEAITQAGLARRIANQLNDYILPRLETIDAPLLA VVGGSTGAGKSTLVNSLVGRMVTQPGVIRPTTTSPVLVHHPDDAFWFDGDRVLPTLVRSQ VASNDASSLQLVAEPDIPRGLAILDAPDIDSVVTRNRDLAAQLLQAADLWVFVTSAARYA DAVPWDFLNEAQERHASIAVVCDRVPVEAMREVPADLGRLMTERGLADSPLFAVPETKTN AEGALPDQAVAPLRFFLSSLAQNQQKRREVIASTLSGAIGSVCERASYVAAGLEAQAVAA SRLYEDAQSIMAESYRSIAAQSADGTLLRGEVLARWHEFVGTGEFMRAMEAKVSWFRDRV VQAFKGAPPEVEKVSVAVESGLESLILAQAQGGCERIESVWHTDPAGRSVLEGADEDLSR PSQGFDEAVSRMVRDWQTDVMELVAGEGMNKRSKARFMAFGVNGVSVALMLVVFAHTGGL SGAEAGIAGGSAIVAQRLLEALFGDDAVRRLAKAAKNQLDARVEGLLANEVTRYRAVLDS SGVDTEVPSRIRASIEEIRQAQDAPEPLSDQVTIRTRREDPEVEASQAREIGQVQADMPV LDAEIVKPAAVLDPEPCQEER >gi|302034471|gb|GL383164.1| GENE 10 11990 - 13600 929 536 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4678 NR:ns ## KEGG: HMPREF0675_4678 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 536 1 536 536 932 100.0 0 MRRRRVDLAERIDLLSRAVDLSEGRIPDDVVVQARAVVERADQRCRIGGDHTVIALAGAT GSGKSSTFNALASAELTDPGVRRPTTSKATAAVWGTESAEALLDWLNVPRRHHMGSGDTL DGLVLLDLPDHDSVCIEHRLEVDRLVEMVDMIVWVVDPQKYADAALHTRYLTPLASHSEI MTVVLNQVDHLDKEQRKNCLRDLRRLLDSEGLGKAKMMAISATTGEGVDDMRVALARAVR AKKAQVARLHADLDNVSQRLAEATGDAAGQVSQDSVDQLIAALCTAGGVEPVVEATREAY RRRGHRATGWPVTAWVSRLRPDPLHRLHLDLGSTRKKGRARSTEPTDVQRSALTARVGVA GAKIDTAVRSLASEASEGLPRSWADVVRAASLSHRTDLPDDIDRAVASTDLGVHHGTGWW KLVTVVQWILMIIVVAGLAWLAVDALSAYFQFRLPPVRWHHFPVPTLMVVGGVIAGVVVS LLCQAGVQAGARAAARYARSELRANLTDVAWQSVVGPVNAELDHHDEVVKIVAKAS >gi|302034471|gb|GL383164.1| GENE 11 13719 - 14180 298 153 aa, chain + ## HITS:1 COG:Cgl2925 KEGG:ns NR:ns ## COG: Cgl2925 COG0629 # Protein_GI_number: 19554175 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Corynebacterium glutamicum # 2 113 5 120 225 65 37.0 3e-11 MDANVSFTGNLGTDVEMKIGEGWRGARFRVAHTPRVMRQGEWVDGTTTWMSVHVYGRLAD NCHVSLRKGDPVMVTGRLRTRSWIDDEGSHEQLIVVAHNVGPDLSRLPATCRRPEKRAEA PLGDDRVVRYHDSPDGVDEDAEVVDDDVEMVGS >gi|302034471|gb|GL383164.1| GENE 12 14302 - 15987 1858 561 aa, chain + ## HITS:1 COG:MT2552 KEGG:ns NR:ns ## COG: MT2552 COG0488 # Protein_GI_number: 15842003 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Mycobacterium tuberculosis CDC1551 # 1 560 1 557 558 833 76.0 0 MTEFIYTMHNVRKAVGDKVILDNVTLSFFPGAKIGVVGPNGAGKSTMLKLMAGLDKPNNG DANLAKGATVGILLQEPPLTEDKTVRENVEEAVGDIKAKLARFEEVSAEMANPDADFDAL MAEMGELQTELDNANAWDIDTRLEQAMDALQCPPGDTPVDVLSGGERRRVALCKLLIEQP DLLLLDEPTNHLDAESVNWLEGHLKSYPGAVLAVTHDRYFLDHVAEWICEVDRGQLHPYE GNYSTYLDTKRKRLQIEGKKDAKRAKILEKELEWVRSSPKARQAKNKARLARYEEMAAEA ERNRKIDTAEINIPPGPRLGNVVLEAEHLSKGFGDRILIKDLSFTLPRAGIVGVIGPNGV GKTTLFKTIVGLEKADSGSLKVGETVSFSYVDQNRTGIDPEKNVWEVVSDGLDYIKVANF EEPSRAYVASFGFKGPDQQKPAGVLSGGERNRLNLALTLKQGGNVLLLDEPTNDLDVETL SSLEDALLEFPGCAVVVSHDRWFLDRIATHILAWEGEDEDGIPRWFWFEGNFADYEANKI ERLGPEAARPHASKHRRLTRD >gi|302034471|gb|GL383164.1| GENE 13 16020 - 16463 70 147 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|315079630|gb|EFT51623.1| ## NR: gi|315079630|gb|EFT51623.1| conserved domain protein [Propionibacterium acnes HL053PA2] # 1 147 1 147 147 244 100.0 2e-63 MHPTSTVGVVTAPAAQTIGAILIPIGIMALRHHHRVDITTGIIIAAALVLIPWMILPVRT PAARRNSHQVHAAGYVRHCPLVRRTCRPTTRANAGRQPASGMGRRSRLDPASLHRGAHDT GLTGPAPHEPRLNGSGCNGTQLVSVPG >gi|302034471|gb|GL383164.1| GENE 14 16354 - 16833 225 159 aa, chain - ## HITS:1 COG:L128255 KEGG:ns NR:ns ## COG: L128255 COG1695 # Protein_GI_number: 15674041 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Lactococcus lactis # 8 65 5 62 120 58 46.0 4e-09 MDDNHWPSEWQRGVLDLCVLHILADGPTYGYSIAARLTDAGFADVKGGTLYPLLKRLEGA GLVDVEWRGGGGGGGAGPKVLPHQHCRKTTPNGAHRKLAALLHHRHPTARRRITIMNYAF ERAHAPHVDGGRRHSSCGTDHRSDPDSDRNHGTAPPPSG >gi|302034471|gb|GL383164.1| GENE 15 16915 - 19788 1216 957 aa, chain - ## HITS:1 COG:Cgl2262_1 KEGG:ns NR:ns ## COG: Cgl2262_1 COG0277 # Protein_GI_number: 19553512 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Corynebacterium glutamicum # 33 511 30 515 544 370 42.0 1e-102 MTATTDILQDFRSTLRGLDASALEILDDSRLARALYSSDASIYRVVPTAIAHPRSTDELS ALVTAASQVGLPITARGAGTTCAGNAVGAGLVIDTSAHLNRILSLDPQARTAVVEPGVVQ DWLQHAGVRHRLRFGPDPSTSTRCTIGGMIGNNACGPRALGYGRTGDNLVDVDLLTADGH VTTLRRGDFAVPFTQRLVDLTDASLATIRTEFATFSRQVSGYSMEWLLPERGRNFPAFIA GTEATLGIVTRATVQLVREAAYGMTVALGYPSMPEAADAVTALLPFSPVACEGFGRRIVD VVSRAGRPVPDLPRGDGWMFVELRGDDETEVASRARKLVAASGCLDGWVVSDPGQAAALW KIRADGAGLAGVSLNKPAWAGWEDSAVPANDLGAYLRDFEALLDDHGLHGLPYGHFGEGC LHCRIDFPLDQPDGPRRYRSFVTEAARLVARHGGSVSGEHGDGRARSALLDLMYSPDALT LFSKVKAILDPDNLFNPGILVNPAPVEANIRTHESALSPMTISHPEFAADVHRCTGVGKC IAPTAPGGVMCPSYQASGLEVDSTRGRASVLKEMVNGTLINGWDSPEVERALDLCMACKG CARDCPTGIDMASYRSTVLDEKYRHRLRPRSHLTMGLLPMWERLLNRIPGAPSLANAVLS IPVFARLARWTAGVDQRRPLPRFQPSARLASPQAAPAKEIVADPETSPSSASTSRFQTRC DHDKGDVVIWVDSFSDMLEGSDLSAVVTVLADAGYHPRVLTNDICCGLTWITTGQLDGAR RRLRAGLDVLTPLSDANVPAVGLEPSCTTVWRDDALRLLSDDPRVRRVARNMHTVAEMLE AANWTPPSLAGHTIVAQPHCHHASILGFGPDKRLLEAAGATVTVVSGCCGYAGNFGVEKG HYDFSVKVAHNDLLPAIEEAGPQAIILADGFSCRRQVSDLIGRRALTLSEVFASHVK >gi|302034471|gb|GL383164.1| GENE 16 19793 - 20323 335 176 aa, chain - ## HITS:1 COG:Cgl1145 KEGG:ns NR:ns ## COG: Cgl1145 COG1846 # Protein_GI_number: 19552395 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Corynebacterium glutamicum # 33 173 6 147 162 83 34.0 2e-16 MSQGGSGRSTNEGATKTCDDVGSQMEKSAATAWLSIEQQRVWRAWLLGSARITSRLSQEL RRHDLELCEYEILASLSEADDYAMRMSVLATEVHQSRSRLTHAVERLEARGLVTREPDVR DRRGVVARLSPTGMDLLRQAAPNYVRTVRHIVVDPVDPEDFAAMGRAMRAVLSVPD >gi|302034471|gb|GL383164.1| GENE 17 20553 - 22382 1215 609 aa, chain + ## HITS:1 COG:Cgl2244 KEGG:ns NR:ns ## COG: Cgl2244 COG1022 # Protein_GI_number: 19553494 # Func_class: I Lipid transport and metabolism # Function: Long-chain acyl-CoA synthetases (AMP-forming) # Organism: Corynebacterium glutamicum # 1 593 28 613 615 296 33.0 1e-79 MLDRQADAHPNRIAFLTPSGPDDEPNTWLPMTFAEFRRQAHEVAAGLMEFGLPREGRVAL LSGTRTEWIIADMAISCAGGATTTIYPNSGPEEASFILVDSHSSILFVDSTAQVAKIQGR PEVDAVVRHIISFVDDSEQTGVSDDRLTTMADVIAHGRRRLAAEPELVRRMIDSIEPDDL CTLIYTSGTTGTPKGVELTHQAWTYMGQAWKSLDMFRGGDIHLLWLPLSHAFGKCLIAIC VEIGITQAIEPRIPRLARSLGEVKPRVMCGVPRIFEKIRAGVMTAYPQGRLASRVSRWAF ATGRDVQQYRRAGDRLPVTVAAKLKIADALVFSTLRRKLGGIEFMICGGAKLSEQVQQWF FSAGIPIVEGYGATEIGAVAFFSGPTAIRSGTVGPVAPGCLARIAEDGEVLVSGPIVARG YHNLPEKTAKAFTDGWFHTGDIGEFDEKNYLRITDRKRDLFKTSGGKYVAPQKVEATLMA NCPYLSNAVVLGEGHKYAVALLTLDRDALMTWGKRHGKADASYAELTADPRVRRSIQWYV DRANSRLERWETVKKFAILDHDLTEDSHSVTTSLKVRRGVVAEKYAYLLDEMFADENDQP GVAKGSDAS >gi|302034471|gb|GL383164.1| GENE 18 22379 - 23224 356 281 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4670 NR:ns ## KEGG: HMPREF0675_4670 # Name: not_defined # Def: acyl-CoA thioester hydrolase, YbgC/YbaW family # Organism: P.acnes_SK137 # Pathway: not_defined # 1 281 1 281 281 547 100.0 1e-154 MTGAVVVDIPLRWSDMDAQGHVNNVRISELVQESRNQAFYTNGAQEMLDTGIVVVSQDVE FLAPFVVDGSPLRVAVGCSQLGAARTVLDYRAWHHDVEVARARGTICPFDFATGRPRRLT DGERGAFESMKVESQQWKPIKVVDVSEAGDFIEVPIRWSDVDRQGHVNNVSLAGYLQEAR ILATTSWSPGMRRAGNYLWVVVRQDIRYRRQVLPTQRSCRVHTALTRLGTSSMTLAGSIA TEEGSALDAATVLVCVDPKTGASVPIDDQTRQALSAYLVTV >gi|302034471|gb|GL383164.1| GENE 19 23232 - 23939 323 235 aa, chain - ## HITS:1 COG:Rv2471 KEGG:ns NR:ns ## COG: Rv2471 COG0366 # Protein_GI_number: 15609608 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Mycobacterium tuberculosis H37Rv # 3 216 343 532 546 146 42.0 3e-35 MGASATWVLGNHDNVRPVSRYGKEISGLDFSDPSAPHAQFHGTPTDVALGRCRARAAAML ELALPGGAYIYQGEELGLPEVEDLPEETLQDPTWKRSGHTDRGRDGCRVPMPWSGSNAPY GWSTNANTWLPMPSNWAEWTVESEQNDSSSFFTLYRTLLAERHANPALGAGTMTWNESSD EVLDFSREPGFQCIVNFGAEKVTVDADAVIASSIPLDTQGKTVSVGRDQAVWLRV >gi|302034471|gb|GL383164.1| GENE 20 23994 - 24905 808 303 aa, chain - ## HITS:1 COG:Rv2471 KEGG:ns NR:ns ## COG: Rv2471 COG0366 # Protein_GI_number: 15609608 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Mycobacterium tuberculosis H37Rv # 5 299 26 317 546 309 54.0 4e-84 MTTSPTINDWWKSAVVYQVYPRSFADSNGDGIGDVRGIIDHLDHLVTLGVDALWISPWYP SPMADGGYDVSDYCDINPDFGTLADADALVAQAHELGLRVIIDLVPNHSSQEHPWFKKAL AAAPGSPERDRYIFRDGRGENGELPPNNWPSVFGSGAWERITEPDGTPGQWYLHFFDVSQ PDWNWENSDVLEEFDRVLRFWFDRGIDGFRIDVANSLVKESGLPDLPENEKFGELVGDSP MWDQPELASIQRRWRAIADEYADTPEGPRMFVAEAYLPHDRLVRYLESDRLHTSFNFEFL ISA >gi|302034471|gb|GL383164.1| GENE 21 24981 - 26429 977 482 aa, chain - ## HITS:1 COG:Cgl1417 KEGG:ns NR:ns ## COG: Cgl1417 COG0362 # Protein_GI_number: 19552667 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconate dehydrogenase # Organism: Corynebacterium glutamicum # 9 481 8 484 484 514 56.0 1e-145 MSDTAPQTAEVGVIGMAVMGSNLARNMARKGFRVAIYNRTASRTDEVIAGHGNEGTFLPF HDLANFVASLERPRRVVMMVKAGCGTDAVIKEITPLLQPGDVLVDGGNAYFGDTRRREEE IRPTGIHYVGTGISGGEVGALEGPSIMPGGSKESYEIIGPVLEKISAHVDGEPCCAWMGT DGAGHFVKMVHNGIEYADMQFIGEAHSLLRAAGLTNAEAADAFESWNHGDLNSYLVEITS RVLRAKDPRNPDTDLLDVIRDEAGMKGTGTWTVQTALELGVDVSTISEAVFARSVSSAMP LRTVGQHVLAGPEHTITVEDRQTFLTDVRDALWSAKVVAYAQGLDEIRTAAAEYNWEVDM GQIASIWRDGCIIRARLLQRIRDEYAAGDLVSLLEAPSVKAELARCQQAWRRVVACAVEA GVPVPGFSSALGYYDQVRAPRLNAALTQGLRDLFGAHTYRRVDDEGSWHLNWSGDGREVR AN >gi|302034471|gb|GL383164.1| GENE 22 26422 - 26559 61 45 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313793873|gb|EFS41897.1| ## NR: gi|313793873|gb|EFS41897.1| hypothetical protein HMPREF9575_00166 [Propionibacterium acnes HL110PA1] hypothetical protein HMPREF9616_01132 [Propionibacterium acnes HL007PA1] hypothetical protein HMPREF9597_02099 [Propionibacterium acnes HL005PA4] hypothetical protein HMPREF9565_00311 [Propionibacterium acnes HL053PA2] hypothetical protein HMPREF9569_01162 [Propionibacterium acnes HL078PA1] hypothetical protein HMPREF9590_00027 [Propionibacterium acnes HL059PA2] hypothetical protein HMPREF9601_00840 [Propionibacterium acnes HL030PA1] hypothetical protein HMPREF9568_00893 [Propionibacterium acnes HL013PA2] hypothetical protein HMPREF9584_02308 [Propionibacterium acnes HL092PA1] # 1 45 1 45 45 79 100.0 8e-14 MCLPIALIGVHTRAASHNLTRSALNCIKSESLERWGRDTEEETHE >gi|302034471|gb|GL383164.1| GENE 23 26621 - 26848 226 75 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4666 NR:ns ## KEGG: HMPREF0675_4666 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 75 1 75 75 150 100.0 1e-35 MKSGYSRAHRRYAEAMIDALAFVPMKTLPGWPEAHYSSVHLLMLCVVWPIATAVLFIFVG WGIHRAKGRNSNDPD >gi|302034471|gb|GL383164.1| GENE 24 26924 - 29536 1900 870 aa, chain - ## HITS:1 COG:MT2542 KEGG:ns NR:ns ## COG: MT2542 COG0308 # Protein_GI_number: 15841991 # Func_class: E Amino acid transport and metabolism # Function: Aminopeptidase N # Organism: Mycobacterium tuberculosis CDC1551 # 7 865 1 855 861 656 43.0 0 MFHGGMMSSVNITREEAQQRSQVITAHSSKVLVDLSGRDPNGDPLGEPTETFVSSSTIQF SSTGGQSHLDLIADGVYAADLDGTPLDPAAFSHNRFPFTTEPGTHEITVTALCRYSHSGE GLHRFVDPADGKVYLYTQFEIADARRMYADFEQPDQKMTFELQVIAPTGWTIVSNSPAPE PTEGPWEGMSRWSFEPTLPISTYLTALVAGEYHVDHGTIHTASGEIDADILCRQSITEYL DADRIRTTTQRGFEVYEAEFGYPYPFGKYTQSFVPEFNAGAMENAACITHRDDLLFRSRV TSAAYENRDNTILHELAHMWFGDLVTMKWWDDLWLNESFAEWASHYCQEKIVEKHGGIDP WVSFANQRKTWGYTQDQLPTIHPIAADMIDLDTVEQNFDGITYAKGASTLKQLVAFVGED KFLAGVRTYFAQNAFSNTELKDLLHQLQVASGRDLSSFTEQWLRTPGVNTVRPDYDVDEK GNFTRFDIVQTATEKYPTLRTHRLGVGIYTLTDDHLTRTELLDVDIHDERTPIAALVGHS RGDLVLLNDSDLTYAKVRLDDHSMATLIDRIDALSDPLARALCWSSAWDMCRDAEMRAQD YVTLVGKGLPSETDLTAVTALIRQATTAAISYSNAEDRQEVRDRLVAILATGLRDAMPGS DHQVAYANGLATAATTDAADLLKGWLSGEEVPEGLSIDQGMRWRLVTALARVGRVGEDEI AAELQRDNIISGSEQAAGARAAMPTAQAKQAAWQRATTDDSVPNETYRQLVMQFIQPDQT EVLSPYVDPYLELCKAIDSHEGQWAKAGHAQVQNALMWLFPSTEVIDAAWLNKLEGWVSD NDPGSTVRRVLAERADNARRILRCQEASRG >gi|302034471|gb|GL383164.1| GENE 25 29872 - 30018 76 48 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4664 NR:ns ## KEGG: HMPREF0675_4664 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 48 1 48 48 84 100.0 1e-15 MAPVGQDVGTPVTMSLVPMDEEAKVDLAKCIPVARQFSLQRTWTKARR >gi|302034471|gb|GL383164.1| GENE 26 30054 - 32276 1489 740 aa, chain + ## HITS:1 COG:Rv3014c KEGG:ns NR:ns ## COG: Rv3014c COG0272 # Protein_GI_number: 15610151 # Func_class: L Replication, recombination and repair # Function: NAD-dependent DNA ligase (contains BRCT domain type II) # Organism: Mycobacterium tuberculosis H37Rv # 12 737 5 691 691 796 59.0 0 MVDDSTQGGELEASEAGAEARHHWTELAQRILDAQDAYYARDAPTISDAEYDRLMVELKK VEDDHPELRTPDSPTQRVGAPQRITDFAPVKHLERLLSLDNVFTRDELSEWMNRVATAVG KIPNFLCELKIDGLAVDLVYRDGQLVSGATRGDGRIGEDVTANVRTIAAIPRKLTGDDVP RLLEVRGEVFFPVADFTDLNAALIEAGKNPFANPRNAAAGSLRQKDSRVTASRPLSMIVH GIGVLEGHDFPSQGHAYDKLAQWGLPVSPYFKIVEHVDEVHEFVTRWGESRDEASHQIDG VVVKVDDVSLQRKLGATSRAPRWAIAYKYPPEEVNTELLDIRVNVGRTGRVTPYGVMRPV TVAGSTVEMATLHNAFEVKRKGVLIGDTVVLRKAGDVIPEILGPVVELRNGTEREFLMPD HCPSCGAELAYEKNGDKDLRCPNAQGCPSQLHERVFGLASRGALDIEALGWEAAIALTDP ENQRPGDDEVAEELPKRQTAVLSSEAGLFDLQLDDLAEVKVWRRRKVNGGPGPWQLEPYF FTKATAKKPSTPTATTKKMFDELAKAKSQPLWRVLVALSIRHVGPTAARALATHFGSVEA IREASVEELAGVDGVGEIIAESVKRWFEVDWHQEIISRWAAAGVRMADDRDEAPEQTLEG LTVVVTGSLEGFSRDEAKEAIVSRGGKAAGSVSRKTDYVVVGENAGSKETKARDLGRPIL DEAGFRYLLENGPQGITTIG >gi|302034471|gb|GL383164.1| GENE 27 32360 - 33649 891 429 aa, chain - ## HITS:1 COG:MT2489 KEGG:ns NR:ns ## COG: MT2489 COG4552 # Protein_GI_number: 15841935 # Func_class: R General function prediction only # Function: Predicted acetyltransferase involved in intracellular survival and related acetyltransferases # Organism: Mycobacterium tuberculosis CDC1551 # 98 410 63 367 387 115 32.0 2e-25 MAESTSSVQVPDPYRLELVTSDGSRSEAVDNVLRAVALGFHLSQPSDAELEHYAACVEGE QLWTIRQPDPDPEFPNLPVATMDTYPSTINTGHGHLEPATFITDVTVRASHRRRGLLRTL MTNTLTRSKEEGLAFAALTATEGSIYGRFGYGISTRDQSVEIVVDGRFKLNHAPSGTVSM ADPLAIDDLRLKVFSEFHRARRGSHNRQPWHVDYASGRWDPQKGGPNRRVRSIVHHNDDG EPDGVVSYQIDKDFGSQITILDMVATTPDAEVALWEFLASVDLIEMIKAPKVDPATPLPW AVEDPRVVKFTRHIDLGWLRILDVKKAMAVRGWDHQGSVTFHVVDPMGYAEGTWQVDVEA PGAPATVTKVDDSTDAATLDVAALGSLYFGMGRGFSLAAAHRITGTDEQIAAVDRMFSTV DVAHNISEF >gi|302034471|gb|GL383164.1| GENE 28 33716 - 34189 410 157 aa, chain + ## HITS:1 COG:Cgl2369 KEGG:ns NR:ns ## COG: Cgl2369 COG0698 # Protein_GI_number: 19553619 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase RpiB # Organism: Corynebacterium glutamicum # 8 154 3 149 157 171 57.0 5e-43 MTFKPSHVHIGTDHAAFELKEYLVGKLTEAGYQVVDHGAASYDSQDDYPDYCIPCAQAVM ADPGSLGIVLGGSGNGEQIAANKVKGIRAALAYTVEIAELARLHNNANVVSLGGRMQTQE EAWQIVETFLTTDFSHEDRHQRRIDKLIRWEDKGSLG >gi|302034471|gb|GL383164.1| GENE 29 34178 - 34417 205 79 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4660 NR:ns ## KEGG: HMPREF0675_4660 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 79 1 79 79 113 100.0 2e-24 MNASDHGKQHRNHDHRRGHGSILKGDRAMRTRELVEQPEPSGESQMPEPGQEWKTILADL QRRATASHVNNSGQENSPQ >gi|302034471|gb|GL383164.1| GENE 30 34416 - 35315 429 299 aa, chain + ## HITS:1 COG:Cgl2944 KEGG:ns NR:ns ## COG: Cgl2944 COG0266 # Protein_GI_number: 19554194 # Func_class: L Replication, recombination and repair # Function: Formamidopyrimidine-DNA glycosylase # Organism: Corynebacterium glutamicum # 28 296 1 269 269 314 56.0 2e-85 MKLSCLNSLRLFDFHDAMTTYPRGQPTVPEGHVIHRLANAIDLAFAGSRVEVTSPQGRFA ESAAMLDGTVLASAQAWGKHLVVDFDNHRPDHLLHIHLGLIGKLAVEPTVPVVGQVRLRI TDGVTAADLRGPQTCELINDDEWGTVAATIGPDPIRDDADPDVAWDKVRRSSRRISDVLL DQRVAAGVGNIYRAEVLFRHRVDPATPGKQISHSTWLAMWDDLVMLMRAGVESGRIDTVQ PEHTPEAMGRPPRVDHHGGEVYVYRREDQPCLVCNTPVRMVAQGGRHLFWCPRCQRRRH >gi|302034471|gb|GL383164.1| GENE 31 35340 - 36686 420 448 aa, chain + ## HITS:1 COG:no KEGG:PPA1622 NR:ns ## KEGG: PPA1622 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 448 1 448 448 857 99.0 0 MNRVTVSPPWTLVSCQESDHESSWMWTHPCGAVLSVQSREGDVAELVAGITMPPGVDDTD VTVPGPTWTLDQPIPAIVWAAGASGIVVTRGACDDAALTVWRQDMGDCHPVDEGVSLLGA EVALSPGSARMALWRGHPAGAVVEALECLPSWLPCETIVDPPEEMMCRTPDAGILVDGID QTSETIGPLPMGAHDLVIYESRGATRVMIGWSPHVASAVGARVDEIVSSFDPRTVSGPQT WLLMSAVGMRVAPFDALEMAAEGLENVLSRPFGKGDDHVAKLLTCCAAFRLGHRVGNPEL RDEGLRRLWELPIDEPGTFMSRCIASAELAELVPGGVWVNVAVHDGEDPLVRAERAIWTG RFGGRDADEAVWELGAFLPAVSGGPLYVDGHRVPRRRAALAYAMTTVWPEDLTSAFGPMR VGELRQRTARRLLISEHLDDEDLALLTW >gi|302034471|gb|GL383164.1| GENE 32 36830 - 37045 67 71 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNNENTLLAIATHVVRLNTRRNTMSRAAMFISRGMTTTGVDLGFEVDREPVRGRAADAAR VSGTGSDDVTP >gi|302034471|gb|GL383164.1| GENE 33 36954 - 40199 2591 1081 aa, chain + ## HITS:1 COG:Rv1640c_2 KEGG:ns NR:ns ## COG: Rv1640c_2 COG1190 # Protein_GI_number: 15608778 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Lysyl-tRNA synthetase (class II) # Organism: Mycobacterium tuberculosis H37Rv # 593 1078 2 494 495 508 53.0 1e-143 MNIAALLIVLRLVFSRTTWVAIANNVFSLFIFPVDGFGWAGVVVLLVLSDALSRRKRFAW WVSLVVFGLMWLVAAAFFIIVVTEVFIGWPTDTLNDVDLAGYLFNVFSVGWILVALLTHR RDFAAHTVRANLGRAVVVLVGGLLATGFIGWLLVSLTGGVGRPRNRLVHIITRILQGSGA GIAQEPTSPHWVQGVVSFLLAVVLVAALVVILRSQRNIAMMSLSDELRLRRLLDENPADS LGYFALRRDKAVVFSRNGHAAVCYRTEAGVALASGDPVGPVDQWPGAIDAFLEVAHTYGW VPAVVGTSEEGATTWNQAGLRAMRIGDEAIISPATFNLDDPDLKPVRHTVTKLRAMGYTT RVRRHEDINPQELHSLIDLTDKWRQNGDERGFSMALSRLGDPLDGRCVMVEAIYPDDGPR AGQTAGILSFTPWGNDGLSLDVMRRDLDGADNGVTELMVAGLMAAGPEIGIRRVSMNFAV FREAIEEGARVGASPVRRLNRWLVLVASKWFQIEQLYRSNVKYKPSWQTRYLNFTDTSDL AQVGLAMGIAEGQLDIPNWLYPVEPPPQPIYSISGHPEIAEFLAEERAPILPQRRLPEQV RTRMATRERLIESGVEAYPPDCKPDHRLSDVAVELTGQEMTVSGRVDACRDHGGVIFVDL FDWTGACQLVMERDTMGVDSLRDFRHAVSLGDHLVATGTVGASRNGTLSLEMTSWRLAAK SLRPLPSRRSGFNDPEAKVRQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVET PILQTIHGGANARPFHTHINAYDLDLYLRIAPELYLKRLMVGGAGRVFEIGRNFRNEGAD ATHNPEFTMLEAYQAYGDYVQMRHLTREMILSAARNATGGTVVRGRDRKGVEHEIDLANE WHVITVNEGISRGLGEEVTADTPKETLIGYANKLGIATLPKWSRGDVVLELHEHLSEHVT VEPTFFCDFPTDVSPLTRQHRDDPRLAEKWDLIIFGSEVGTAYTELVDPVIQRERFTAQS LLAAGGDPEAMELDEDFLEALEYAMPPSGGMGMGLDRLVMMLTNASIRETISFPLVRPRT L >gi|302034471|gb|GL383164.1| GENE 34 40242 - 41183 476 313 aa, chain + ## HITS:1 COG:no KEGG:PPA1620 NR:ns ## KEGG: PPA1620 # Name: not_defined # Def: putative poly(3-hydroxyalkanoate) depolymerase (EC:3.1.1.-) # Organism: P.acnes # Pathway: Aminobenzoate degradation [PATH:pac00627]; Microbial metabolism in diverse environments [PATH:pac01120] # 1 313 1 313 313 606 99.0 1e-172 MGGDDEIGCSDMHGHKMLDSSHDAVTSVRELGRRPFRVAYDDGEGPDYHVKDPVVLLMAG AAASSDFWKPVVDRLQHVDVITYDRPGIGGTIWPGRYPELDEEVASLTDLVGLVQGHWDI GQPRKVILVAHSMAAFHAEAFARMHPEVVAGVVFVDPSVEWPTHPPRRRSVALPRAVYKV MDSVAGSLGRHAFAVGVMAQTARSGSVVWHQFQEHRLHRVYGSPDAMAMAVAEWIGYDQQ AWDLMAVRSQHAWPDVPTVLLSAVYSGQEQELKLHERLAPMLNARLVVVENSHHLMMLDR PEAIADAICSLVR >gi|302034471|gb|GL383164.1| GENE 35 41382 - 41591 97 69 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTPILALGHNGNRSLVNTTDYKLHESPSYKALYRRFAVLRPGITQRLQQALHRAFLGSDA WKLFKSPPD >gi|302034471|gb|GL383164.1| GENE 36 41949 - 43412 883 487 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4652 NR:ns ## KEGG: HMPREF0675_4652 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 215 487 1 273 273 523 99.0 1e-147 MSKRVNAMRDFIVSHPWWCVLIVAAMFWIPRAGIWMTVGSWLAIIAVCAKHRSLPAAKVS ARVVSSGSSMELNVGDRVTRYDVFGMCYYEVPKSVVGSTVLCVEREPQNSYDKNALKVSV DGSHIGYVSVWAAADIAPEWDSLGVTSMDVHGCVISALDAYVEIPTNDALRGALTRPRTS KTMPSIRPLAHPRLLSSAPSTKRMQMPVKPWGPCVRNYKLVATKKFKAGITRVCVSCGED GKREKVRLDDLDAQVRLTPNHKLAVFIDDVQVGMVPDEARESYRHVVEELHSSHQCLLVP ASIWMTRQNGFKAGVSVKFPLPDEVKVPVGMPSGPVAILPQGRKVQVTGEENHTEALLGL LAGEHSVPVVAELESFIKKLKTTERTVVGVKVGGVMVGLLSTQMSQHFLPVVEACEEAGI TLVCSGRITGNQLKVDMVLEAVKGSELPPEWINDNVYRYAKRLAGQAGAPESSLHQGESS YDDRVAE >gi|302034471|gb|GL383164.1| GENE 37 43566 - 43814 183 82 aa, chain - ## HITS:1 COG:Cgl0714 KEGG:ns NR:ns ## COG: Cgl0714 COG0210 # Protein_GI_number: 19551964 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Corynebacterium glutamicum # 1 70 694 763 766 61 50.0 3e-10 MHRAKGIEFSKVFLFGVSSRSIPMGIKDYDFDKDEGDQALLRERSLLYVAASRARDELVV SWTDQPSPLLSASVSSVAASTS >gi|302034471|gb|GL383164.1| GENE 38 43817 - 45820 973 667 aa, chain - ## HITS:1 COG:Cgl0714 KEGG:ns NR:ns ## COG: Cgl0714 COG0210 # Protein_GI_number: 19551964 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Corynebacterium glutamicum # 12 650 9 673 766 404 39.0 1e-112 MAESTIIMSKQALKLDGSLKPKAFTFLEKLTTDDTAPGLHIEPVKKCRDSRVRTGRVDQQ YRAVLFKLTGEDGNRRYVLEGFYNHDEAYDVAPRVELAINPFNGIPEIKRAEPSIDTPNP TASAPTARKPAPPVQETATPVITADRADMLSLGLDANLVDTALALTSEDAVLNMAASLSG WQEAALVGLASGMTPEQVRQELLESPEELPEPSKKQHGHAASPREPDVELLESLRSPAAA MEFATIEGVDELRRVIEDGNFGAWRVFLHPTQRRFVNGRWNGPFCLGGGAGTGKTVVILH RAVSLARENPGARIIITTFTKNLAHELSASLESLDPALPRASALGQPGVYVIGIDALANA VVREAGADVAEAAEGVLGAPRTDLSRRTSQWLWRDVLDHAGPEVPERLAHHRLLETEYEQ VILPQNITTREEYLRARRPGRGFRLNRRDRDAVWTLVKKYRDDSRISGTISFPEAAAIAA QYLTRHSPLADHVLVDEGQDLTPAHWRLIRSLVPEGPNDIFIAEDSHQRIYGHRLVLSRY GIMTRGRSRRLTLNYRTTAQILRWSTHVLEGGFYVDLDGDDDDKLSGYRSARRGPDVIAH PCTTITEEFDYLAKVVGQWAKDRQSETTAVLVRDRSQRERVVDALHERGVQPEPSVMARY RPGRQWL >gi|302034471|gb|GL383164.1| GENE 39 45813 - 47717 887 634 aa, chain - ## HITS:1 COG:Cgl0715 KEGG:ns NR:ns ## COG: Cgl0715 COG1205 # Protein_GI_number: 19551965 # Func_class: R General function prediction only # Function: Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster # Organism: Corynebacterium glutamicum # 1 612 1489 2084 2100 214 28.0 4e-55 MDLRWINLGKETPSAPSQHVAGVRYHAPLFRICEGCGHLDRTTGTNDPSEHRPWCRYRNK LDEHVRTVALTRSLTTQAVVLPLPRWMVAGDVFALPSLRAALLLGLREQFGGTPNHLGVM PIKEPVGGGTRDALLLHDLVPGGTGYLAEFNDPQKVWDALRHAFQIVRDCPCKDEERLAC HRCLLPLAPAHEVQHVSRAKAEDCLKVLMGLVDDDEPEAQMTWKVTTKAPSTNPSDESYL ESRFRESFITLAHNLHARISQSYGPGGNVINVSIGKAKYTLQPQLPMHGCKPDFVLRGGD RPDLAIFTDGETFHATPAHNRVRDDAKKRAALRSAGIEVLAVTLTDVKAFDSRQIPVPPR WFNSSASSMLIGTYNYTSDAVRAVTGGPFALLEYWMSGKSLDALEGFASAIPFFFSTGEP DDHVDPSIPADNLQQRGLPKDRTAPVWWSQNGPLSIRTRLRASSPRPATDVCVVLDDDAV SSPDFSHAWHQWLALSNALILRRPPDQTVIRGTQPLEESPAEPTHSVGTIDITQTPWPTV IENLGSSLATPELPGLLEDLAAQGVSEPTAGEEIGSEGIMVDLAWPESRIAVIFAPEPDH EDLLAEDGWTLVPPTAHDITMALANTTEGEGHHG >gi|302034471|gb|GL383164.1| GENE 40 47698 - 52167 2388 1489 aa, chain - ## HITS:1 COG:Cgl0715 KEGG:ns NR:ns ## COG: Cgl0715 COG1205 # Protein_GI_number: 19551965 # Func_class: R General function prediction only # Function: Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster # Organism: Corynebacterium glutamicum # 1 1456 1 1468 2100 898 39.0 0 MSELVPPKQAAKLQNALLDYLTTTFALSDADAQRALDEFLRDPDEGIFKGPYLRTRMPFA PAPRYSADELEWMPENFTPYGHQARAFTRLNSALGRPRPTLVTTGTGSGKTEAFLLPVLD HVIRARRNGVTGVKGLILYPMNALANDQAQRLAHLISTDKQLAEVTAAIYTGENGATRTI VSKDGLITDRTVIRDDAPDILLTNYKMLDQLLLRHEDQHIWQQSAESLQYLVLDEFHTYD GAQGTDVAMLLRRLGLALKSYWPERGSKADTHTTEEWDRPLGKITPVGTSATLGTTPDIS KTANQSSSGERSGDMAAFATTVFGEPFDTSCVVTEFRKTIDEWAGDAQKRLWDREIEPRT INALIVNDLVNAVTHRPSDEVCATLLTSLYEGAEGLTDRDDLVLLAKGHPFIRQFLEATT EAIHVRDLADRLLPGTSHENDPRVTFLLELLGALGHLRALPDRDMPSTETHLWIRELSRI DRDVSTATHFRWSDDGTVLGQTTDDGTEPEVVALPAVYCRRCGRSGWGVQLASTGNNLSE NNDSIRRTHAAHDGRFRALLSAPREGASAVDTGEATASLRWFDTVNRCLDHHIPDADSPK YRNGVLLPVLTQVGNDADEDAKDDVCPSCGAKDAIRFQGAAIATLLSVCLSTLFGSDDFD EKKALVFTDSVQDAAHRAGFISSRSHALTLRTILRGAIGEEYATIPQLIQGVLDQAGDDQ FKRYRLLPTELAEQKNFRDFWRSARYRKVPKKTLSQVRNRVAFDAILELGLQSRYGRTLE QTGSICVEVNAGTPAQMAAIGRSALGHSEDDLVATLASLTDDQVVSWVRGILERIRIQGG INHPWLHTYLEDDGARWHLWGGRKEPGMPAFPYTRSAPAFPRVGGQHVQHQQLDNVTDGQ SWYARWTGRVLGVSAGHGARLVRSLLECLHRGSVLEGTATKAQATVYAIPNERIMVRATR DEELRDSTILLRCDLCQAVHPGSPATVRQLTDAPCLNGNCSGHLTPAPMAPDNFYRTFYS AGDPRRIVAREHTSMLTDKRRLKYENGFKDGSEDPSAPNVLVATPTLEMGIDIGDLSTVF LSSLPHSVANYVQRVGRAGRATGSALDVTMVRGRGEHLPRLGDPASMINGQVRPPATYLS AVEILRRQYLAHLGDELARDPDAAHPLTSSAAMNGGNGGFLACLVDYAEAHADEHLDRFL STFASLRTDSIENIRTWACPANGPRTSGLAQQVFAAAGRWSRTLEELRHRRETIKASLPE LLQKANIPNAGNDDIQAAKEAETTIEWIGKLLGKANQAYWIATLEEYGLFPNCTLVDDSV KLHVNLSWYDPDKEKYRSKASSFSRGSAAALRDFAPGATFYAMGHAITIDAIDFGRDGDS IRTWAVCPTCGYIVDLELAGNAPAQCPRCHRQGISDIGQHLKVVELTRASAAIKRDESRI DDTHEERTQASFAVAPAADIDPLTYPQRVVRAAHRVWRSISRPNGPALD >gi|302034471|gb|GL383164.1| GENE 41 52164 - 55592 2269 1142 aa, chain - ## HITS:1 COG:Cgl0716 KEGG:ns NR:ns ## COG: Cgl0716 COG1002 # Protein_GI_number: 19551966 # Func_class: V Defense mechanisms # Function: Type II restriction enzyme, methylase subunits # Organism: Corynebacterium glutamicum # 1 1136 395 1530 1532 1034 47.0 0 MGLGNQALQQVLERLLLSKEQHGRKGRERGYISYAELGINQLGAVYEGLMSYSGFFATED LYEVAHDGNPQKGSWVVPLSRAHDIAQEDFVTVVDDHGARHPRIHRRGEFVFRLSGRARQ QSASYYTPEVLTRFTVGQALEELLDDTTTAEEILHLSVCEPALGSGAFAIEATRQLAEQY LTRRQAELGRRIDPEDYPAQLQRTKAYIALHNVYGVDLNATAVEFAEITLWLDTMASGLD APWFGLHLRRGNSLIGARHAVYTRDQLTSKAWLTTPPTDVPLTDLAARLDDDAVDPTQAD GSIPHFLVPAAGWGSSADSKEAKTLVPQRVKDVKDWRKQFRRRPSRHDVTTLVELGHQVE DLWTMALRRLTVAEQQTSRDIALWGRNEAPSHRQVVTREQVEQSLADPDGAYQRLRLVMD AWCALWFWPLTTQVAPPSWAEWIDACTMLLGGRLSRADRRRDAPMLGSAQIWEALAAQED LALASAGAATVAQTLDKHPWLQVCRQVAREQGFFHWQLDFAPVFARGGFDLQVGNPPWVR SILDMDALLAEGDPWWQLAGKTPEDVREQRRTVTLALPGLADSVCRGITDVSGTGSFVGH ATNYPMLQGLQPDLYRCFMCQTWAHTSSRGTIGLVHPETHFTDEKAGHLREETYPRLRRH WQFVNELKLFDEVHDLVTYGVHVYGSPAQPHFLQASALYHPDTVVGSLRHDGSGGAPGFK VDGHWDQRPHAQRIETVTDETLATWRDILDPNLEAPRRTRMLYTVNRDVAETLQQLSKAP RLGSLSLRFSPGWHEKNDRTKGYFIQQWGTPDSWNDVILQGPHLHVATPFYKSPNPTMKH NQDWSVVDLETLPPDAIPVTSYKPAGDRAWYDADYTHWDGDPARDHYRLAWRAMAANTGE RTLIPAIIPPGTAHPNGVFCVGGADNRILTACAGFASSLLLDFSVRAAPKSGIYQAVFDR LPAPCQRHPLLPALLLRTLRLNCLTDAYADLWAECFDPSFTSDSWTIPDRATTPLGDVGP TWTSQTPLRRAVDRRQALVEIDALVALMLGITADQLCTVYRTQFAVLYGYDHDQYFYDAH GRLVPNQVLKVRRKKGEAITEAERTATTYRYDLPFHTYDRELDMHIAYVEFERRLETRGT DS >gi|302034471|gb|GL383164.1| GENE 42 55652 - 56788 786 378 aa, chain - ## HITS:1 COG:Cgl0716 KEGG:ns NR:ns ## COG: Cgl0716 COG1002 # Protein_GI_number: 19551966 # Func_class: V Defense mechanisms # Function: Type II restriction enzyme, methylase subunits # Organism: Corynebacterium glutamicum # 1 368 1 355 1532 233 39.0 5e-61 MPSSDALIVVEDWISEHFFTTDARKESFQKLVLDRRKQWDGEDVPTTRTRFTERASKLAT MLAALYSEDLDEAARAEAAEQAHEELLRVLGYSTGEFRIRRDGPVRWFSTAGIEQSALAV VTARPVETPDQLMVKDARTLPTPWRPSEDAPDSEEVHSTSRLVSTLFAPKEGPSFALIMA GRWLVVAEKGRWPEGRYLAVDVQTVAERADLKKGGEVDRALTCLEAASLAPDADGHVWWS EALDESIKHTVGVSQDLREGVRESIEIIANEVVSRRRDRGLEPLSQDQAQPLAMQSLRFL YRILFLLYAEASPELGVLPVGAPQYDSGYSLDRLRELVQVPLVTQRSMAGTHLYESLGTL FRLVDRGNLEDVATRRPA >gi|302034471|gb|GL383164.1| GENE 43 56775 - 58742 1018 655 aa, chain - ## HITS:1 COG:Cgl0717 KEGG:ns NR:ns ## COG: Cgl0717 COG0553 # Protein_GI_number: 19551967 # Func_class: K Transcription; L Replication, recombination and repair # Function: Superfamily II DNA/RNA helicases, SNF2 family # Organism: Corynebacterium glutamicum # 3 641 315 954 962 469 42.0 1e-132 MKRRHRNDPEVSSVAGADWAKRKPPQNLLVKATAAEDAVADELEQVWLHPTGSSPYSGAA SALFPWTIAKAFLSSPAALRQTISERRRRITAHPTTPDQQVEIEALDRLNELNDAVFDSS AKYDELVRYLRSIGIDRRSSERVVVFAERVATLCWLRDRLRGDLCLAEDQIAVLHGGLSD TEQQQIVESFKQSNSPIRVLVTGDVASEGVNLHQQCHELIHFDIPWSLIRIEQRNGRIDR YGQRHSPQITTLLLEPSNPVFRGDLRVLSRLLKREQEAHEALGDAGSLMGRYSASAEEED IKLVLAGRRDFNDVVRSVDELSPEDSLACLLASLNAPTDDKPPSAKFTEPSPLYPRPVDF LREALEAYYTTPSAAPTDTGRGGGVSWRDHGDGVVEFIPPADLRQRLEVLPQSYLQDRHV LERFSLATDETVAQAQLVRALTDDSDSSWPEAHYLSPLHPVLDWAADRALSKLSRNAVYV VRGKVDLPAVLAVGTLTDRRGLVVAASWMCIRFLDPENLTSPWITMHTSSADMLADVGVG ADMSNPGPVARPDDLKPLVELAMNAADEELKSTFDAAKEGTQDRIAAWNHKTVAWQEDSQ TLIPNHALRIRRTSVEEEKQLIADMEPQQKLARPLLVVVPENYPTAHEECAHAKQ >gi|302034471|gb|GL383164.1| GENE 44 58739 - 59650 749 303 aa, chain - ## HITS:1 COG:Cgl0717 KEGG:ns NR:ns ## COG: Cgl0717 COG0553 # Protein_GI_number: 19551967 # Func_class: K Transcription; L Replication, recombination and repair # Function: Superfamily II DNA/RNA helicases, SNF2 family # Organism: Corynebacterium glutamicum # 4 296 12 305 962 340 57.0 3e-93 MPITVAPGSVVQVRDEEWLVSTVEQTDDGQLLTVQGLSDLVRGTTAKFYEHLDNIIPLDP HDATPVADASPHYRDARLWLEATLRKTPIPLGEPTLAASKYALAKRLQYQYSAVQQALDP ENLRPRILLADAVGLGKTIEIGMILSELIRRGRGERILIVCPRHVLEQMQNEMWSRFAIP FVRLDSVGLQRVKQKIPANRNPFSWYKRVIISMDTLKQDRFTHDLHRHEWNAVVIDESHN VTGDTTQNNRLTRTLAPNTDALILASATPHNGNRKSFAELIRLLEPTGVNPHGELDKGDL SVW >gi|302034471|gb|GL383164.1| GENE 45 59714 - 59995 161 93 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4645 NR:ns ## KEGG: HMPREF0675_4645 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 93 19 111 111 155 100.0 7e-37 MLVVHGMMQVNGHPDASPVISGIAGLGHIGLSVGLVGLMVALFTSLPTGKLGTAHDQSLT LKQAATTRHIAYISGHHHDGSHGYNGWRITPAT >gi|302034471|gb|GL383164.1| GENE 46 59811 - 60260 91 149 aa, chain - ## HITS:1 COG:no KEGG:PPA2360 NR:ns ## KEGG: PPA2360 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 138 1 138 182 266 99.0 2e-70 MRSLKKLAICATTWLVIGLLGGVFSREFTKAHDVTAWTQLKVVHTHSLALGFMLTLIVLL VERAFALSHHRGAFAFLGIQPWPPADDRNARRARHDAGQRTSRRLPCDLRYCGSRPHRPV RRSRRPHGGPVHITSNGQIRNSSRPIFDP >gi|302034471|gb|GL383164.1| GENE 47 60749 - 62341 1899 530 aa, chain + ## HITS:1 COG:Cgl2361 KEGG:ns NR:ns ## COG: Cgl2361 COG0544 # Protein_GI_number: 19553611 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) # Organism: Corynebacterium glutamicum # 1 435 1 432 449 294 41.0 3e-79 MPSSLEKLSTNRVKLTIEMPFDELKPSLDKAYKDIANQVNVPGFRKGKVPAPVIDQRFGR GVVLQEAINDALPAAYGKAIEENTVVPLGQPEIEVTKLEDGEVVEFTAEVDVRPDFDLPD VSAISVEVPAVEVPDEDVDERVETLRQRFATNTEVERAAAKDDLVTIDLAGTRDGEALED ATASGVTYKVGSEGMLEGLDEAVTGLKAGESAEFHSTLVGGPLRGQDADIKVTVTKVCEQ ELPAVDDDFAQLVSQFDTVDEMRADLRTALENMARLDQAADARDKVLEEVISKIDIELPT SLIDSELEARRQQVNQQLAQAGMTVEEYLEDSEEEVDNADDFWAEIEKRSLDALKAQIVL DKMADDDEIGVEQNELTELLFRKAQQNGTSPEEEAQHMMQHNHLPDWMQEIRRGKALASM VGAATVTDSKGNALELDRIQPDGTIADKQAEEDAPAEDSAEKADGKATEEPKAEEKAPAK KATTKKISAKKSAGAKATTKKVVDAKSDDKPAAKKPAPKKKTAAKDDKSK >gi|302034471|gb|GL383164.1| GENE 48 62446 - 63747 1068 433 aa, chain + ## HITS:1 COG:STM1481 KEGG:ns NR:ns ## COG: STM1481 COG0628 # Protein_GI_number: 16764826 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Salmonella typhimurium LT2 # 88 420 12 339 344 138 26.0 2e-32 MNKRPARPTRSRRRISVAPATRQLRNARQMMADDIAVARAVERGELETEEHPTHGATNAE KAAESGLQPQPSDHEKAEVATSKHGLPKLTIVLLTVAAAWLGLSFLHELSSVVAPLFFGL NLLITAYPIHTWLVKHKCPRWISATTAGTAVIVVLAAGVVGMVWSVAAMINQLQSYIPQM EKIYTQLLHWSTQLGYSQDVIADKLKKIDPQQVMSVVTSVASDTTSVVTMIIVILTGMIF MVMDTPQMHDRLRMAGSRKPDVVLALESFASGIRKYWLVTTVFGLIVALFDWAALLIIGV PLAGVWALFSFLTNYIPNIGFIIGVIPPALLALFKDGWVAAVAVVVSYSVLNFVIQSIIQ PKFAGDAVGLTPTMSFVSLLLWGWVFGALGTLIALPCSLLVKATLIDHDPGARWVNALIS SRPTEGLEDNPDE >gi|302034471|gb|GL383164.1| GENE 49 63823 - 64461 676 212 aa, chain + ## HITS:1 COG:Cgl2360 KEGG:ns NR:ns ## COG: Cgl2360 COG0740 # Protein_GI_number: 19553610 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Protease subunit of ATP-dependent Clp proteases # Organism: Corynebacterium glutamicum # 21 202 10 191 197 240 65.0 1e-63 MSHNTSIASQGMPAMAGPETGGAGMTDNVYQSLLRNRIVFLGSEVKDENANALCAQMLLL NAEDPEADIYLYINSPGGSVTGGMAIYDTMQWISNDVATVTMGMAASMGQFLLTAGTPGK RYALPHAKILMHQPLGGVGGTATEIAINAKMLKDTKRELSQLNADHSGHTLEQILEDSDR DHWFTAQEALEYGLIDHVYSNASQLRGDAPNQ >gi|302034471|gb|GL383164.1| GENE 50 64397 - 65158 772 253 aa, chain + ## HITS:1 COG:Cgl2359 KEGG:ns NR:ns ## COG: Cgl2359 COG0740 # Protein_GI_number: 19553609 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Protease subunit of ATP-dependent Clp proteases # Organism: Corynebacterium glutamicum # 56 250 8 201 208 213 62.0 3e-55 MGSLTTSTAMRRSFAATPPISEVTMGFNAFDKNRLAALNAEQAEQAAPGGLAPAGPRNDY YIPQWEERTSYGVRRVDPYTKLFEDRIIFLGTPVTDDIANAVMAQLLCLQSMDADRQISM YINSPGGSFTAMTAIYDTMNYVRPDIQTICLGMAASAAAVLLAAGAKGQRLSLPNSTVLI HQPAMGQATYGQATDIEILDDEIQRIRKLMENMLATATGQSVEQISKDIDRDKYLTAQGA KEYGLIDDILTSL >gi|302034471|gb|GL383164.1| GENE 51 65347 - 66636 242 429 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 [Bacillus selenitireducens MLS10] # 160 407 248 448 466 97 29 4e-19 MARIGESGDLFKCSFCGKSQKQVKKLIAGPGVYICDECIELCNEIIEEEFSSSDEAGGVE DLPRPRELCEFLDAWVIGQEEAKRTLSVAVYNHYKRIQSEANVPRARRAEDDGVELGKSN ILMLGPTGCGKTYLAQTMARQLNVPFAMADATALTEAGYVGEDVENILLKLLQAADFDVK RAERGIVYIDEIDKVARKAENPSITRDVSGEGVQQALLKILEGTVASVPPQGGRKHPQQD FIQIDTTNVLFIVGGAFAGLEDIIAKRIGTRPLGFNNDPGASEVIEGPEALSLVRPEDLH QFGLIPEFIGRLPMVTAVHPLDRKALVRILTEPRNALTRQFEKLFELDGVELTFTEGALE AIADKAVARGTGARGLRAIIEETLMDVMFDVPSRDDVSRVVVTQEAITGEGKCQYLSTPV FHGRGRLSA >gi|302034471|gb|GL383164.1| GENE 52 66639 - 66884 60 81 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313763512|gb|EFS34876.1| ## NR: gi|313763512|gb|EFS34876.1| conserved domain protein [Propionibacterium acnes HL013PA1] conserved domain protein [Propionibacterium acnes HL074PA1] conserved domain protein [Propionibacterium acnes HL110PA1] conserved domain protein [Propionibacterium acnes HL110PA2] conserved domain protein [Propionibacterium acnes HL087PA2] conserved domain protein [Propionibacterium acnes HL083PA1] conserved domain protein [Propionibacterium acnes HL059PA1] conserved domain protein [Propionibacterium acnes HL046PA2] conserved domain protein [Propionibacterium acnes HL036PA1] conserved domain protein [Propionibacterium acnes HL036PA2] conserved domain protein [Propionibacterium acnes HL063PA1] conserved domain protein [Propionibacterium acnes HL063PA2] conserved domain protein [Propionibacterium acnes HL007PA1] conserved domain protein [Propionibacterium acnes HL056PA1] conserved domain protein [Propionibacterium acnes HL086PA1] conserved domain protein [Propionibacterium acnes HL005PA4] conserved domain protein [Propionibacterium acnes HL050PA1] conserved domain protein [Propionibacterium acnes HL050PA3] conserved domain protein [Propionibacterium acnes HL036PA3] conserved domain protein [Propionibacterium acnes HL067PA1] conserved domain protein [Propionibacterium acnes HL027PA1] conserved domain protein [Propionibacterium acnes HL002PA1] conserved domain protein [Propionibacterium acnes HL002PA2] conserved domain protein [Propionibacterium acnes HL082PA1] conserved domain protein [Propionibacterium acnes HL037PA1] conserved domain protein [Propionibacterium acnes HL053PA1] conserved domain protein [Propionibacterium acnes HL045PA1] conserved domain protein [Propionibacterium acnes HL072PA2] conserved domain protein [Propionibacterium acnes HL005PA1] conserved domain protein [Propionibacterium acnes HL005PA2] conserved domain protein [Propionibacterium acnes HL005PA3] conserved domain protein [Propionibacterium acnes HL053PA2] conserved domain protein [Propionibacterium acnes HL078PA1] conserved domain protein [Propionibacterium acnes HL027PA2] conserved domain protein [Propionibacterium acnes HL002PA3] conserved domain protein [Propionibacterium acnes HL072PA1] conserved domain protein [Propionibacterium acnes HL038PA1] conserved domain protein [Propionibacterium acnes HL059PA2] conserved domain protein [Propionibacterium acnes HL046PA1] conserved domain protein [Propionibacterium acnes HL030PA2] hypothetical protein HMPREF9338_01496 [Propionibacterium acnes HL096PA2] hypothetical protein HMPREF9337_01719 [Propionibacterium acnes HL096PA3] conserved domain protein [Propionibacterium acnes HL043PA2] conserved domain protein [Propionibacterium acnes HL043PA1] conserved domain protein [Propionibacterium acnes HL013PA2] conserved domain protein [Propionibacterium acnes HL092PA1] conserved domain protein [Propionibacterium acnes HL087PA3] conserved domain protein [Propionibacterium acnes HL083PA2] conserved domain protein [Propionibacterium acnes HL020PA1] conserved domain protein [Propionibacterium acnes HL087PA1] conserved domain protein [Propionibacterium acnes HL025PA2] hypothetical protein HMPREF9343_02291 [Propionibacterium acnes HL099PA1] # 38 81 1 44 44 72 100.0 7e-12 MRRLARPPVTGTNHTSSSAVNTTRSPWTSGYRKYPVAMGVRVPSVTETKGRREGRYAKAR KSMAILQKRADKLLAEVLDEH >gi|302034471|gb|GL383164.1| GENE 53 66772 - 70032 2065 1086 aa, chain + ## HITS:1 COG:SSO2098_2 KEGG:ns NR:ns ## COG: SSO2098_2 COG0793 # Protein_GI_number: 15898881 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protease # Organism: Sulfolobus solfataricus # 678 1067 1 387 387 264 39.0 1e-69 MATGYLRYPDVHGDLVVFTADDDVWLVPVTGGRASRLTNDHVMVRNPRFSPNGTKIAWTS YLGQRPEVFVIDLATGDQRRLTWLGAARSFVVGWQDDEHVVFSSPHQTNDVGLAWLYTVS LDGHVERLGYGPGMDLAVSSDGAVAVVTPNSGDCSRWKRYRGGTAAQIWLRPARAEKFLR LLREGNDNHDGYAAAGRYSVGWNDGRLIFSSDMSDDDCPQAQAQIWSVDGQGHDLRQHTH HGEAEGYVRDPRTDGTTIVYHTHGALWRMTGLDAEPERLEIDLGIGAPPRMPLDPTDRLE AIVSDHGGDGSLLEWRGAAYFLTHRSGPARALSAADGVRIREPRVLGQTGQGVWASDVDG EDCLEVANLDGTGEIRRIAQGQIGRVLHIAPAPDGTKVALISHDGRILIVTIADGAIREI GKSLEGEANGLAWSPDSRYVVWRSPMATGEAMIGQIRCWDEQGMGEPFELTRGAFDDSCP VFTADGKYLAMLSARTFDPNYDGQTFDLSFGHTQRPWLVPLSATEASPFGPSSQGWRISE VQDAKAKANAETSNGEADETVICHVAADGFEERMVPFPVPSGSYRDLAVVKDGVVWIEVA DRGGELGATRAGVTGEAPSDVLWHYNLSARHLDKLCERVDTFSVSGDGERLVVRHRDDTI VVPSSHKVDDDDPAYIRVDLTRLRRTVNPRAEWRQMFDENGRLMASHYWREDMNGVDWDS VLNRYRPLVDLCHVVDDLHDILWETVAELNTSHSYVSASGAAGDSDMRAGLLGADVSSGN DGAKVVRVIPGESSDPRAWSPLRAAGVAVTEGDVIVAVDGRKVGADGNLGELLEGSAGRV VELTVRRGENERQVAVVPMADEAPLRYHDWVASRRRYVEEHSGGRLGYLHVPDMVSDGWA ELHRQIGEATRHEGVIADVRFNHGGHTSQLVVERLARRVVGWDYSRWYATADTYPQNAVR GPIVMVTNQWAGSDGDIVAAATQAMGYAKVIGERSWGGVVGIDGRFDLVDGTSVTQPRYA GWYGSYGWGVENHGVDPDIVVTVSPEDWEADCDVQLDAAIAECLRQLDDKPAATAPELPG PAFDRC >gi|302034471|gb|GL383164.1| GENE 54 70150 - 74115 2383 1321 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4636 NR:ns ## KEGG: HMPREF0675_4636 # Name: not_defined # Def: F5/8 type C domain protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 1321 1 1321 1321 2479 99.0 0 MSRTPRGRSIGALAVSAGTMLALIAPMTPAHAETRYRQINQAAITAVAADSATATDPISN TLDGNPDTIWHTKWQNGKDPLPHWIVFKLGDEAVDLGKVEITPRSSSNGSGRMHDYELYT ADTKTCNNAAFSSAKPVAAGSYGVSNTSIRKITFAATKATCVKVKVNSSWGGDGSDEEVS SMAEFNAFTVDGSDPSPDPTPSEPPTPEVPKDAISLSDGTVTVRARRDFPQVIDYTVGHA HMAGRIGSPLTKVRINGTDHVATVSAPTTTGSSASWKLTFRDLPGVELTANIKVSDGVMT WSISHIVDTPDRRVNIVSVPGLTLASVTSTDPKAQLSSANIVVDRNKTGDLFQPLATADV SQDTSWVAMANDSTLAAGFEDNATQDGLVGSAATVARFVHSISQVGGTKVGAIEPATWVH RGKGSATPCPTDSLGNKAVCQLPGGATVKDGIGPDPDTPYVRVKIVADANADGKVDWQDA AVATRDVTMKPTGSGDVANKVITHIPFNIVSQATHPFLRTLDDVKRISLATDGLGQQALL KGYQAEGHDSAHPDYGGNISHRAGGMKDLEKLTESGRQWNTDFGIHVNLVESYPEANHFG DNILVKPYQKAWDWMEQSYRMDYAKDLGSGQLFARLNQLRKELGAKSNLDWLYFDTNYPA GWQNDRIANALNAEGWRIGSEWSSTYPRYNQWSHWANDENYGTGNKGYSSRIIRFIDNSR RDTWNPDPILGNSNVVEYEGWTSHNDYNAFIANVWQRNLPTKFLQRSDIMSWQDGRIAFA NGAVATSSKKSISGHEIPTARTITFDGATVFKEGGSYLLPWSNGGSDRLYYWNPGNGSAT WKLTNSWAAQKSVSLFMLTDTGRVKVAEIPVTNGSIRIPATKAKTAYVLYPTSKVPAAKT PNWGEGSHFANPGFYSGDTAGWNARGNVSVKHNDRGNFHLEFGKAQSQISQVLNLPAGDH SLWAWVQIDPTKTRPVGLAVDGTGVTPIDHQKGCGGHAESVITSTTAINATASDEYFGTY HQRLRVAFHSDGRPVTVTLKALAGNVIVSADDFRVVDAAVPSDPHVTPATVLFQNFEDVD TGYWPFVTGSAGMEGDARTQLSRRHEPYTQKGWNGRAMDSVLSGDWSLKMHEERNGIVLR TTTASAPLTGGGTRYRISFDYPADKPGYSFVTGHDKVSGKSVKEVITESHAMGVATSTTH FSTDIVVKDQPAWIGFTHQGEGDMSIDNLRIEKLDPRPVSVTSTQAAVFPDACKPTPEPI QPAQPSASAPATSGSPQAPGTGNRPNRYALPRTGADGAGLGFSSSEAASATAAVGVSRQG R >gi|302034471|gb|GL383164.1| GENE 55 74342 - 76954 2399 870 aa, chain - ## HITS:1 COG:RP687 KEGG:ns NR:ns ## COG: RP687 COG0525 # Protein_GI_number: 15604530 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Valyl-tRNA synthetase # Organism: Rickettsia prowazekii # 29 861 14 812 814 585 37.0 1e-166 MTSQTFTTSSATPPTRGVVPDKPALEGLEVKWGKIWEDEQLYAFDATAVDSREQVFSIDT PPPTVSGHLHPGHVFSYTHTDTVARYQRMRGKKVFYPMGWDDNGLPTERRVQNYYGVRCD PSLPYDPDFTPPSKPDPKRQVPISRRNFVELCVELTAVDEKTFQDLWRAVGLSVDWKQLY TTISPESQRIAQLAFLRNHARGEAYLSDAPTLWDVTFSTAVAQAELEARDYPGAYHRLGF HRPNGEDVFIETTRPELLAACCALIAHPDDERYQHLFGTTVTTPLYGVEVPVLAHSAAEM DKGAGIAMCCTFGDLTDVAWWRELQLPTRTIIGRDGRILSETPQWIIDAGSAEKYETIAG KTTFTARKLVVEALVESGEMDGEPKPTQRKANFYEKGDKPLEIIGTRQWYIRNGGRDDDL RNALLERGRELEWVPEHMRHRYENWVEGLNGDWLISRQRFFGVPFPVWYPLGTDGEPDYE HPLLPDESALPVDPASQPPSGYQESQRGVAGGFIGDPDVMDTWATSSLTPQIVTGWERDA DLFAKTFPMDFAPEAHDIIRTWVFSRVVRAHLENGVLPWKRAAISGFVTDPDRKKMSKSK GNTVVPTEIIDQFGADAVRWRAAMARPGMDSPFDKAQMKVGRRLAMKILNASKFVLGFGE GGQVCDITNPADLSMLAGLRQLIAEATEAFDKFNYTAALEVCEQFFWTFCDDYLELIKER AYDSEGADNAGALSARTALRLALDVMLRLFAPFLPFVTEEVWSWWKDGSVHTSSWPTTDE IPVTGDVDLMSDVSAALVELRGVKSTHKVPMRTPILSARISAPASVIANLKAVESDLAKV SKTESLTFLAEGDELILEAELGEPPAKRKK >gi|302034471|gb|GL383164.1| GENE 56 77095 - 77892 843 265 aa, chain - ## HITS:1 COG:DR0753 KEGG:ns NR:ns ## COG: DR0753 COG1651 # Protein_GI_number: 15805779 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Protein-disulfide isomerase # Organism: Deinococcus radiodurans # 81 259 85 261 262 65 32.0 1e-10 MADKKATATTSKRAALRAQREAQESAKKRRRIIGVTAGVVIIAMVVVAVVFGLNHKSDDV PTTGQITPPSATKDGVYTLNPDKVKAGAPTVTVFQDYQCPACKGAEDALGKPLNELSAEG KIKLEYHTLTFLDSNLHNDSSTRAAMAAAAADVVGKFEAYHDVVYRHQSKDEGAGYTDEQ LRKEFAAEAGITGSNLTKFQRIYDNKQTEQFVKNGNDKGLQELQKSGNTGTPAFLINGKS WDGWADFMQSVPSADELLQAIKKAH >gi|302034471|gb|GL383164.1| GENE 57 77977 - 78471 459 164 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4633 NR:ns ## KEGG: HMPREF0675_4633 # Name: not_defined # Def: putative type IV conjugative transfer system protein TraL # Organism: P.acnes_SK137 # Pathway: not_defined # 1 164 4 167 167 280 98.0 1e-74 MDSQPSLRSSTVRDWAGLAARIILGATLLVAGIIKATDIDSTIWSVRTYQIVPWDLAPVI GWTMPILEIIVGLMLIFGIATRWSGLLGTLAMVVFIVGISSVWARHISLGCGCFGNGGPV DRNWDLTQRTYVLDILRDLGLTLCGVWLVIRPRSALSVDHWITS >gi|302034471|gb|GL383164.1| GENE 58 78637 - 79371 203 244 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163781723|ref|ZP_02176723.1| 50S ribosomal protein L13 [Hydrogenivirga sp. 128-5-R1-1] # 5 221 3 204 228 82 29 1e-14 MTSRRLMRYQSTQGLAEGVAHRLVQTIVRIQAAQERIDLCLTGGRIANIVYAAMEDVPEC AKIRPDQLHVWWGDDRFVPTGHPDRNSLQALSLLSSAIRLDPSKTHVMPAADGKADPDEA AYSYAQELGGVVFDICLLGMGTDGHVASLFPGHPSFNPTTAALAVGVTDAPKPPPDRLSV TMPVINRSKRVWFLVSGPEKAEAVEKVFAGDESLPATWANGTIETSWMVDHDASIGLPRY NCSL >gi|302034471|gb|GL383164.1| GENE 59 79368 - 80300 587 310 aa, chain - ## HITS:1 COG:Cgl1539 KEGG:ns NR:ns ## COG: Cgl1539 COG3429 # Protein_GI_number: 19552789 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-P dehydrogenase subunit # Organism: Corynebacterium glutamicum # 1 284 1 301 319 161 37.0 1e-39 MIVTLNDTTASKIGGAIVEARRTVGSGSGLVHTLICICDSSHFDAAFEAARDAARQHPSR LLMVVTTRSRKDKLDAEVHAGEGTPGDVIVLRFSGAMAKRPASVILPLLLSDSPVIAWWP FSGPDDLASDPIGALADRRITDSAADKDPCKALIRRAAHLTEGDSDLCWARTTSWRALAA AALDQHPATVESARVESAAGNAPAMLLAAWLGLRLGVPVERVTTDAPGISAIVMSTSGGD IEIRRRSGRYAVYRIPGEPARGVALDRREVQMLIGEELRRLGPDKVFTAVMAEIHDGAGR ISLTNDRDES >gi|302034471|gb|GL383164.1| GENE 60 80310 - 81755 968 481 aa, chain - ## HITS:1 COG:MT1494 KEGG:ns NR:ns ## COG: MT1494 COG0364 # Protein_GI_number: 15840906 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-phosphate 1-dehydrogenase # Organism: Mycobacterium tuberculosis CDC1551 # 1 481 33 514 514 664 67.0 0 MFGVTGDLSRKKLMPAVYDLANRGLLPPGFGLVGFARRDWEDEDFAKVVHDAVAERARTP FREEVWEQLLEGIRFVRGEFDDNDAFERLANTIRELDEKRGTGGNHAFYLSIPPRSFETV ISQLKRHGMTGHDSSHWSRVVIEKPFGHDLESARDLDEIISSAFSPESVFRIDHYLGKET VQNIMAFRFANQIFEPIWNNHYVSHVQITMAEDIGIAGRAGYYDGIGAARDVIQNHLLQL MALTAMEEPTSFDAKQLCAEKTKVLAAIQPPDDMFAQTCRGQYVAGRQGGERVRGYLEED GVGPRSRTETYAAVRLTIDNRRWAGVPFYLRTAKRMPRRVTEVALNLQRAPHLPFSDTAA LGTNAVVLRIQPDEGVTLRFGAKVPGTQMELRDVTMDFAYGSSFTEASPEAYERLILDVL LGDPPLFPQHEEVELAWKILDPVLDFWAESNTPPCKYPAGSWGPSEADEMIARDGFVWRR P >gi|302034471|gb|GL383164.1| GENE 61 82013 - 83122 904 369 aa, chain + ## HITS:1 COG:MT1498 KEGG:ns NR:ns ## COG: MT1498 COG0109 # Protein_GI_number: 15840911 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Polyprenyltransferase (cytochrome oxidase assembly factor) # Organism: Mycobacterium tuberculosis CDC1551 # 82 369 22 304 308 265 52.0 8e-71 MRTSAVRKPKIVKTAIRGTSHFTDVPCPAAAAMPFSISKDTVSNQTTHVATAPASQRPDP VETKLEQEQGRPRLSSRDVVHAYVALTKPRIIELLLITTLPVMFLASHGLPKLGLAIATM VGGLFAAASANVFNCVIDVDIDQKMRRTRRRPLPRHQVPRRSALIYGIILEIIATIILGF GTNWLSAGLALIANLFYVFVYSMLLKRRTWQNTIWGGIAGCFPPLIGWTAVTGSVRWEPL VLFFIVFWWTPPHTWALSFRYREDYEAAGVPMLPVVRDAPEVTIQILIYTVMTVATSLVL WPVAHMGWIYVVVAVASGAVFIVEAAQLLRRANAGLRDALLKPMGLFHWSNTYLSLLFLA IAVDPLIHL >gi|302034471|gb|GL383164.1| GENE 62 83236 - 84744 719 502 aa, chain + ## HITS:1 COG:Cgl1519 KEGG:ns NR:ns ## COG: Cgl1519 COG4409 # Protein_GI_number: 19552769 # Func_class: G Carbohydrate transport and metabolism # Function: Neuraminidase (sialidase) # Organism: Corynebacterium glutamicum # 120 437 80 399 399 285 49.0 2e-76 MTLTTKLSALTIAGIMVVIGVPMVTQSAMASGRAPAPVAATTQPKLVTGDITSTDQSGTN LFFGKKIVRNARGAIMKVDRTWPAAVPAPLPDVRADSSTRMLLGPVVDLAVNEHPAGVFY RIPALATASNGDLLASYDLRPGSAGDAPNPNSIVQRRSRDNGRTWGPQTVIHAGTPGRRK VGYSDPSYLVDPATGRILNFHVKSYDRGFATSEVGTDPDDRHVLHAEVSTSTDNGHTWTH RDITREITPDPTTRTRFVASGQGIALLHGPHAGRLIAQMTVRNSVGQQAQSIYSDDHGIT WHAGNPVGRMMDENKVVELSDGTLMLNSWDAARSGRRKVAYSQDGGLTWGPVKLVDDLID PTNNAQIIRAYPNARAGSAKARILLFTNVRNATERVNGTLSVSCDDGRTWVSHQTYMPGE VGYTTAAVQSDGALGVLWERDGIRYSTIPMGWLNSVCPLAPSGRPTSGKPTSGTSLPPTA TPSGSLHGGASSRPTSLPHTGD >gi|302034471|gb|GL383164.1| GENE 63 84864 - 85745 625 293 aa, chain - ## HITS:1 COG:Rv1456c KEGG:ns NR:ns ## COG: Rv1456c COG1612 # Protein_GI_number: 15608594 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Uncharacterized protein required for cytochrome oxidase assembly # Organism: Mycobacterium tuberculosis H37Rv # 13 288 17 308 310 120 36.0 2e-27 MTARDRRLYGWCIAALVTNMGIVVTGAVVRLTGSGLGCNTWPHCTAGSFTPHEAMGIHSF VEFGNRLLTFVLVAVAIGALVRCYRIKITAQLMALCWINLVSIALQAVIGGVSVRVGLNP FVVALHLLMSVAIILVNVKMIWLVGPHSSEAVDGLTMGLVRATVAMMCVVMWLGTVVTGS GPNAGDSGSARTGFNIETVARLHGISVWITVALTIACLVIATTRHLAMMRRWSIILVSVE IYQAIVGYSQYFAHLNPWLVIWHMVGVSLAAAAVGALWCSVRPMPSPVLNRQS >gi|302034471|gb|GL383164.1| GENE 64 85742 - 86506 574 254 aa, chain - ## HITS:1 COG:Cgl1531 KEGG:ns NR:ns ## COG: Cgl1531 COG0842 # Protein_GI_number: 19552781 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Corynebacterium glutamicum # 8 252 23 264 268 99 34.0 5e-21 MTTLDLHPAPQAAPAAARVRNHALTEVRLVMRNGEQLLLALVIPIGIIVAGRFLGGRVGL TMDVLAPSVLALAIWSTCFTSQAIMTGFERRYGVLERLSATPLGRSGLLAGKAMAYSVIS LAQVILLVIVSLALGWHPHGSGLAWLPTLVSVALAMMTFGLAALAMAGSLKAEVTLGLAN LVYIVGLVAGAVVWPLVDYPKAIRPVIAALPTTALGESLRAWGVGYTLWWPLASLAGWAI LLGLLARKVFTWIS >gi|302034471|gb|GL383164.1| GENE 65 86508 - 87257 301 249 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 14 216 2 212 311 120 34 5e-26 MPETPLTLDPHAPTEVLLLEDVRVTFGHVIALDGLSLTATTGAITAVLGPNGAGKTTMMR CCTSLISPDSGRIDVLGHAPGSPEAAAATGLMPQSAGAWSGIRAGELLHYMAGLHANPID PDLLIEALAITPFARTTYRRLSGGQQQAVNLAAALVGRPKLVFLDEPTSGMDPHARHHTW DIVEQMRHDGVSVVLTTHNMDEAQRLADHVWIVDRGRVATHGTVLELTAESSLEDVFLTH TSDRAAGRN >gi|302034471|gb|GL383164.1| GENE 66 87286 - 89769 2433 827 aa, chain - ## HITS:1 COG:PAE1771 KEGG:ns NR:ns ## COG: PAE1771 COG3808 # Protein_GI_number: 18312865 # Func_class: C Energy production and conversion # Function: Inorganic pyrophosphatase # Organism: Pyrobaculum aerophilum # 140 784 90 721 721 213 31.0 1e-54 MKRLRSCALPILLTTLALAGCGSGGQTKGGGGGEANLKLPPLNEHVGNISGTALLWIGLV ICLFGLGFGLVTYAKLQKLPVHEAMHEVSELIYETCKTYLKQQAKFLMLLWAFIAAVIVV YFLLLEHMGAKVLIILLFSLVGMAGSFGVAWYGIRVNTFANSRTAHASLRGSPWETFDIP MRSGMSIGMVLISVELTLMLFIMLVLPGDLAGPCFIGFAIGESLGAACLRIAGGIFTKIA DVGADLMKIAFHIKEDDARNPGVIADCTGDNAGDSVGPSADGFETYGVTGVALITFVLGA VPDQTEQVQLLVWIFVVRVVMLIASFVSYLINNAVAKARYGTVSEMDFEKPLSSLVWITS VMSILLTVLTTRWMLGSMGDGTMWWKLSIIISCGTLAGALIPELVKAFTSTNSRHVREVV TSAREGGASLDILSGLVAGNFSGFWLGIIIVALMGASFLVSGAGSGLGDMGAMSEVKWAV FAFGLVAFGFLGMGAVTIAVDSYGPVTDNAQSVYELSTIEDIPNVSDELKKHYGFAPRWD IAKHILEAQDGAGNTFKATAKPVLIGTAVVGATTMIFSIIMMLTEGLSNAAEVNKLGLTH APFLLGLITGGAVIYWFSGASMQAVTTGAYRAVEFIKNNMQLDQNATKASSKDSKKVVQI CTEYAQKGILNIFLGVFFAALGFAFVDPYFFIGYLISIAIFGLYQAIFMANAGGAWDNAK KIVEVDLDAKGTELHDASVVGDTVGDPFKDTSSVALNPVIKFTTLFGLLAVELAVSIGAG LLTYILAAVFILVACVFVYRSFYGMRIDSTKDPDEFGVVAKEAGSGS >gi|302034471|gb|GL383164.1| GENE 67 89933 - 90994 592 353 aa, chain - ## HITS:1 COG:BS_degA KEGG:ns NR:ns ## COG: BS_degA COG1609 # Protein_GI_number: 16078147 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus subtilis # 5 332 4 333 337 157 29.0 3e-38 MSGPTLADIAYQAGVSQATVSRVLNDKPGVSSPTRQCVLTALDVLGYQRPTHLKPVTTGL VGLIVPELTNPVFASHAQAIETLLSREGYATAVCTQAPGGMREDDYIRVLQSRQVAGIIV MSGSHADTTADMSTYHELVDVGLPLVLVNGYSPSIAVPQISDDDISAMDQAVAHLVGLGH KHLGLAVGPRRYVPVQRKEQGLRAAMDRHLEGRGRVTVSNTVFSVDGGARAAVDLLGQGV NAIICGSDLMALGAIRAARAQGLSVPDDVSVIGCDDSDLMRYTDPPLTSLRQDVELISTM AVQSLMGSIRGDTAFFGERLVRPELVIRGTTASARASTMNPSVSRQHSAALCL >gi|302034471|gb|GL383164.1| GENE 68 91020 - 91925 1008 301 aa, chain - ## HITS:1 COG:SA0209 KEGG:ns NR:ns ## COG: SA0209 COG3833 # Protein_GI_number: 15925920 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type maltose transport systems, permease component # Organism: Staphylococcus aureus N315 # 38 301 22 278 279 210 43.0 3e-54 MSTATVSSAIKDANRNTPFSKRFKSQWWRHLLGIIAVVFAAFPLVYVLSASLAPGGTLTG SNKLFSQTDFSNYSKLVSDPVRPYAQWYLNTLIIAAVTAVLTVFLGALAAYSFSRMRFKG RRGGLLALMLVQMFPQLLTVVAIFLLLTWLGDVYPVLGIGSRLALIMVYLGGALGANTYL MYGFFNTVPQSLDEAARVDGAGHARIFFTLILPLASPILAVVGLLSFIGSFTEYVVASVI LGADPHTSTLAIGLYQYVSTENSSNWGVFAAGAVLAALPPMVLFLWLQKYIVSGLTGGAV K >gi|302034471|gb|GL383164.1| GENE 69 91925 - 93529 1366 534 aa, chain - ## HITS:1 COG:VCA0944 KEGG:ns NR:ns ## COG: VCA0944 COG1175 # Protein_GI_number: 15601697 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Vibrio cholerae # 33 528 26 520 524 268 35.0 2e-71 MSSSLTINRKAREKRVAAASGKYSGSLWAWITKIALLGILDAIAVYGVMTAIAHSSPLMA IVIAAVAIIVTVIYLPPNRMLPAKYLAPGIIFMVIFSVGVMAYTIYVGFTNYGDGHNGSR DDAVAAIQRNHQERVPNAPAYNSSVAEKDGKLALIVIDPGTKKVHAGTPNQPLEPVEGAE LNSLGKIKNLPGYRVLPFSEVSQRSNEISQLRVPVSKDSSAGFIRTTTGSQAFEFISTMT YDKKAGTMTDKKGTVYRDNGRGNFVSASGKSLEPGWKVTVGFFNFKKALTDHGVRGPFLR VTAWTFAFAVLSVLTTFALGLALALLFNDASMKGQKTYRILMLLPYAFPCFLSALVWSGM FNQEFGFINQVLLGGVSIPWLTNPWIAKAAVLIVNLWLGFPYMFIVSTGALQSIPSDILE ASRLDGASTWRIFTKIKLPLLMVPLAPLLISSFAFNFNNFVLIYMLTLGGPRFTDTSLDV GATDILISMVYKVAFSGAQRDYGLASAFSVIIFIIVGVISWLGFRQTKSLEEVN >gi|302034471|gb|GL383164.1| GENE 70 93630 - 94895 1409 421 aa, chain - ## HITS:1 COG:TM1204 KEGG:ns NR:ns ## COG: TM1204 COG2182 # Protein_GI_number: 15643960 # Func_class: G Carbohydrate transport and metabolism # Function: Maltose-binding periplasmic proteins/domains # Organism: Thermotoga maritima # 48 410 18 383 391 213 32.0 4e-55 MSDITRRSMLLGSLGVAAIGVLSACGGNDSPSTSASSSSGKNSSAAGAAGSILVWTDSNR EPVLRKVAEQFKSDTGVTVKLAVKDFAKIPDDFITQAPTGKGPDAAIAAHDATGRMVQNG VIAPLELGEISAYQDVAIQAFTVNGKIYGVPYATENIALVRNTTFVKDAPKTFDDMIEMG KKSGAKYPFLVGLDPKQSDPYHLYPFQASFGAPVFELKDKGFDSSKVAMGGTNGEKFASW LADQGKTKNFNLNVSQDISKDLFAKGQAAFILTGPWSLDSFTKAGIKYEISEVPSAGDRP ATPFVGVQGFWMSAKTKDAVATQKFLVEYIGNPNVQTELFKVGHRPPASKQAFEKAKTDK DVAAFGAVGQKAVPMPNIPAMGSVWADWGVAQAEIISGKASNPKATWDAMVKAIDDKIKK V >gi|302034471|gb|GL383164.1| GENE 71 95192 - 95395 128 67 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MATYRRRCQTKTIGQFTGRRRTIVQDGRHHTISRGAVRSLLLVLADDVATCDGHLGVGRI FHNSIVA >gi|302034471|gb|GL383164.1| GENE 72 95309 - 95974 464 221 aa, chain + ## HITS:1 COG:ML0592 KEGG:ns NR:ns ## COG: ML0592 COG2345 # Protein_GI_number: 15827238 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Mycobacterium leprae # 4 198 50 247 254 150 45.0 2e-36 MSSILHNGPSTASELADRLGLTAAAVRRHLSALVSRGLVDSREKKVFGARGRGRPSRVFF LTDHGRADYYTAYDDLAISALRQLADAAGPSALDAVAKARVDDIESRYRALRQARPDEVP AQLLAEVLSADGYVATIQPAGAGQQICQHNCPVAEVAKVFPQLCNVETQLFSELLGSHVQ RLATIAHGDGVCTTHVPVDVEITRRALAEPSKSPSIRKDHS >gi|302034471|gb|GL383164.1| GENE 73 95971 - 97419 1447 482 aa, chain + ## HITS:1 COG:Cgl1527 KEGG:ns NR:ns ## COG: Cgl1527 COG0719 # Protein_GI_number: 19552777 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, permease component # Organism: Corynebacterium glutamicum # 16 482 15 481 481 770 78.0 0 MTQVDTPASLPGAGASQDEHLAALSGYKYGWHDSDAYAAASRRGLSEDVVRGISAMKHEP QWMLDMRLKALKLFQRKPMPTWGVDISTIDFDQIKYFVRAQERQAASWEDLPADIKNTYD RLGIPEAEKDRLVAGVAAQYESEVVYHKINEELGKQGVVFLDTDTALKEEPELFREHFAS AVPLGDNKFSALNSAVWSGGSFIYVPKGVHCTIPLQAYFRMNTENLGQFERTLIIVDEGA YVHYVEGCTAPIYKSDSLHAAVVEIIVKKNARCRYTTIQNWSNNVYNLVTQRAYVEEGGT MEWIDGNIGSKANMKYPACYLMGPHAKGEALSVAFAAESQHQDTGAKMVHKAPYTSSTIV SKSISQGGGRSAYRGLVSVGKDAHHSSSAVRCDALLVDDISRSDTYPYNDIRTDEVSMAH EATVSKVSEDQLFYLMQRGLTEEEAMAMIVRGFIEPIAKELPMEYALELNRLIELQMEGA VG >gi|302034471|gb|GL383164.1| GENE 74 97472 - 98680 958 402 aa, chain + ## HITS:1 COG:Rv1462 KEGG:ns NR:ns ## COG: Rv1462 COG0719 # Protein_GI_number: 15608600 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, permease component # Organism: Mycobacterium tuberculosis H37Rv # 29 389 23 385 397 264 41.0 2e-70 MSAPVAAPGKGHNVTIENDVESHLHPTPSWEIADHPMPTGREEIWRFTPIKTFIPVLSEV ALEPRQEAGIIDVDVKRADGITVTDLATSELKKLAETPQDRLSALAAADPHAVNRRVVIP AETSLKAPVEVTVAGHNDEIACHHNVVVEIGNHAEVTVIVRHRGVAHLGENWTFRIGDGA QATVLFVQEWDDAAIHGAQVSFEIGRDATVRTAQASFGGKAVRICQTASYNGPGGNLTQL GAYFADAGQHIEHRLFVDHNAPSTESHVDFRGCLQGKDAHSVWIGDVLIRPVAEDIDTYE SNKNLVLTEGCRADAVPNLEIQTGNIRGAGHSASTGRFDAEQLFYLQSRGVEEAEARRLV VHGFFTDIVRKIGVPEISEELVARIEAELVESLGSSPSVEEG >gi|302034471|gb|GL383164.1| GENE 75 98680 - 99003 285 107 aa, chain + ## HITS:1 COG:SSO2080 KEGG:ns NR:ns ## COG: SSO2080 COG2146 # Protein_GI_number: 15898866 # Func_class: P Inorganic ion transport and metabolism; R General function prediction only # Function: Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases # Organism: Sulfolobus solfataricus # 4 99 5 108 108 61 32.0 4e-10 MSVVTTLSALKENSPQEFEVDGIDVVLVRTDGEVFAVGATCTHAEVPMVDGEVVDCGLEC YMHGSFFDLRTGEPRSLPATEPLSVYPVTIDGDNVLVDVANPITKES >gi|302034471|gb|GL383164.1| GENE 76 99010 - 99783 868 257 aa, chain + ## HITS:1 COG:Cgl1525 KEGG:ns NR:ns ## COG: Cgl1525 COG0396 # Protein_GI_number: 19552775 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, ATPase component # Organism: Corynebacterium glutamicum # 1 248 1 251 252 330 64.0 1e-90 MATLQINDLHVDVETEAGPKQILKGVDLTINSGEVHAIMGPNGSGKSTLAYTLAGHPKYT VTGGSVTLDGEDLLAMTVDERARAGLFLSMQYPVEVPGVSVANFLRTARTAIEGRAPKLR TWVKEVNETLTRQELDPDFAERSVNEGFSGGEKKRSEMAQLELLHPRFAILDETDSGLDI DALKVVANTVNRYMTDPEHGLMLITHYTRILRYVKPTQVHVYVDGRVAATGGPELGEELE AEGYEKYLSAAKANASL >gi|302034471|gb|GL383164.1| GENE 77 99780 - 101021 1037 413 aa, chain + ## HITS:1 COG:Cgl1524 KEGG:ns NR:ns ## COG: Cgl1524 COG0520 # Protein_GI_number: 19552774 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine lyase # Organism: Corynebacterium glutamicum # 2 409 10 419 421 402 50.0 1e-111 MSYDVEKIRKDFPILSTRVGDYPLTYLDSANTSQKPQVVIDTLSDHYARHNANVARAMHQ LGLESTQAYEGGRERLARFIGAARPEEVVALSNASEALNLCAYTLGERLGPGDEIVISVM EHHSNLVPWQIICQRTGATLRWFDITDDGRLDLEKAEAEGLINGRTKVVSLTLASNVLGT INPIGMIAEQAHSVGAVMVVDASQAVPQMPVDMTTLGADLVAFTGHKMCGPTGIGILWGR YDLLAELPPFLGGGEMIEVVRMEGSTYAEPPHRFEAGTPPIAQLAALGVAADYLDGIGMQ AIAEHEHELAARMLEELQTVKGVHILGPSDATARIGTVSFTIEGVHPHDAMSIMDGHGVA VRGGHHCARPLHERLGIQSSLRASSYLYSTTDEVDRLVESVEYARNFFAGGAA >gi|302034471|gb|GL383164.1| GENE 78 101018 - 101518 386 166 aa, chain + ## HITS:1 COG:MT1512 KEGG:ns NR:ns ## COG: MT1512 COG0822 # Protein_GI_number: 15840925 # Func_class: C Energy production and conversion # Function: NifU homolog involved in Fe-S cluster formation # Organism: Mycobacterium tuberculosis CDC1551 # 1 145 3 149 162 158 54.0 5e-39 MNVEEMYQQIILDHYREKHHSGLREGYDAEVTQVNPSCGDELLLRVHVDGDVITDVSYDA VGCSISQASTSVMTDLVIGKTIGEAQDLYRGFQEMMRSRGTVELDEDIYEDAVAFEGVAK LMARVKCAMLGWSALEDSLLKVTEGSPDKVGSVSGTDSNETKEESR >gi|302034471|gb|GL383164.1| GENE 79 101515 - 101871 460 118 aa, chain + ## HITS:1 COG:Cgl1522 KEGG:ns NR:ns ## COG: Cgl1522 COG2151 # Protein_GI_number: 19552772 # Func_class: R General function prediction only # Function: Predicted metal-sulfur cluster biosynthetic enzyme # Organism: Corynebacterium glutamicum # 17 118 34 137 137 112 55.0 2e-25 MSEENALPGQEVTLTAMPTVDDVIEAMKDVIDPELMVNVVDLGLVYGVNIDGEGNVTIDM TLTSPTCPLTDRLEYDTQTVLEGIVKSVTINWVWLPPWGLERITDDGRAQLQAIGFNV >gi|302034471|gb|GL383164.1| GENE 80 101945 - 103957 1431 670 aa, chain - ## HITS:1 COG:CAC3371_1 KEGG:ns NR:ns ## COG: CAC3371_1 COG1902 # Protein_GI_number: 15896613 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Clostridium acetobutylicum # 5 405 4 401 401 499 58.0 1e-141 MSEIHRILFEPTTIGSIHVKNRYAMGPMGPLGMSTAEGGWNQRGIDYYVRRAAGGIGLII TGVCQVTNPIEHLPSGTLPNPTLSPASFLRTSREMTERVHAHDSRIVLQVGAGSGRVIMP VVLRQGERPAAPSEIPYKWNPHITCREITTDEIHQIVAQFRIAAKVAYEAGFDGIQVHAC HEGYLLDQFATEKFNHRTDEYGGSLENRLRFPREIVEAIHETVGDDFPVQIRFSPKSMMK DWNVGALPDEDFEEVGRDMPEGIEAARLLHSYGYEALDIDVGCYDAWFWNHPPMYQAKGL YLPYASELKEALPDIPLIVAGRMDDPDLAANAVSDGIVDMVSLARPTLADPDIVVKLQTD HAERVRPCISCQEGCLGRIGTYTVLNCSVNPEAGREADTHLHPVLPHDAKRVLVIGAELA GMEAARVLSERGHEVVIVEASNHIGGVVLAGGQPSFKEDDLALLEWYRTTLEELGVEIRL NTPATADLIASFGADHIILATGSTPRRLNLGDDTKVIDATDALLNRNALGSKIVIIGGGL TGCELALAMREVDAEVTIIEAEANILTHNAPLCVANEDMLRRLVPFRGITVMADAKALHT TPKGLMTEVNGHEQEIPADTVVTAIGYLPEQDLRGAVEATGLPFNVIGDARKPANIMYAI WDAYEVAAVI >gi|302034471|gb|GL383164.1| GENE 81 104397 - 104852 294 151 aa, chain - ## HITS:1 COG:no KEGG:PPA1540 NR:ns ## KEGG: PPA1540 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 151 1 151 151 275 100.0 5e-73 MKVYIALVKACTTSVGTISPRRTRHHAPYLDRMSDMSMPRRAAPEDDTDLADAARSWRRY LILVICGVIVAVLGLGIFGYLAWWSLCDQAAGVCQRGEPVMYWCSVVSLAILGLIIGVLT QIWLEKRWWHMLAIVIPAVFIVAGIFFWLAV >gi|302034471|gb|GL383164.1| GENE 82 104871 - 105275 296 134 aa, chain + ## HITS:1 COG:elaA KEGG:ns NR:ns ## COG: elaA COG2153 # Protein_GI_number: 16130202 # Func_class: R General function prediction only # Function: Predicted acyltransferase # Organism: Escherichia coli K12 # 1 131 12 147 153 72 36.0 2e-13 MDVTTLYACLWLRSVVFNGEQQCTEPDLDGRELEPTTIIVWASVDGRPVGTLRVLDDKDH LVIGRVAVDAAYRGLHIGRRMMDLALEIAAADGREVALHAQSYLEDWYRDCGFVVTGPHC EEAGIDHVPMALRR >gi|302034471|gb|GL383164.1| GENE 83 105334 - 106932 1415 532 aa, chain + ## HITS:1 COG:ML1816 KEGG:ns NR:ns ## COG: ML1816 COG0488 # Protein_GI_number: 15827973 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Mycobacterium leprae # 1 532 1 545 545 604 59.0 1e-172 MLQVKDVEVRVGARLLLNPVSFQVATGDKVGLVGRNGAGKTTLTRVLAGEALPAAGSVRR TGELGYLPQDPRDPDMETIARARILSARGLDHMLERMRTLEHQMANGSEEDRAVAMDKYA KTEDRLIAAGGYGASAEAARIASNLGLDDRVLSQPLKNLSGGQRRRVELARILFSGADTL LLDEPTNHLDADSIIWLRSFLQSYSGGVLMISHDTELVEATVNKVFHLDANRATLDIYSM GWKLYLEQRAADEKRRHKERINAERKAAALQAQADKLHAKATKAVAAQQMARRAEKLLAG VEGERAVDKVAAIRFPDPAPCGKTPLTARNLTKTYGSLEVFAGVDLNIDRGSQVVVLGLN GAGKTTLLRILAGKETPDTGEVIAGHGLKLGYFAQEHDLLDMDRTVLENMASSATDLNET EMRKILGSFLFTGDDVHKPAGVLSGGEKTRLALATLVVSSANVLLLDEPTNNLDPASRAQ VLDAIGNFGGAIVLVTHDEGAVHALDPDRVLVLPDGTEDMWSADYAELISLA >gi|302034471|gb|GL383164.1| GENE 84 107002 - 107556 569 184 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4605 NR:ns ## KEGG: HMPREF0675_4605 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 184 2 185 185 202 100.0 6e-51 MVARAPRLVGEARQAVAEELAGRYHDGASIRSLARESGRSYGLVQKLLREAGVEFRRRGG ADPASPETKAERETVEKSQEIDQQDSVDSNTNGGGTSPSPEDIDALKLAVEAAVARAEKA DRKAHKAEKALRKLRRAGAGKSRRKKAKATLNKRRAKAEKADRKVRKARRRLDKAEHSID NRQF >gi|302034471|gb|GL383164.1| GENE 85 107585 - 108256 484 223 aa, chain - ## HITS:1 COG:Cgl1091 KEGG:ns NR:ns ## COG: Cgl1091 COG0500 # Protein_GI_number: 19552341 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Corynebacterium glutamicum # 9 201 54 258 288 121 36.0 8e-28 MTSTPAGANADTVEMIAARQRVLDAGLFGDLDARLAEILIGRDRIVEVGAGTGHHLAQVL EAHPDSHGLASDVSKAAIRRAAKAHPRMAAVVADTWAGLPIRTGCIDAGLCVFAPRNRDE FARIMKPDGIFVVVTPLPDHLQQLRERTGMIGIQPHKHDELMAALASRFTVIGHEEVRAD IPLDKQTASDAVAMGPSAHHIHNVHVDAMSITSAVEVTVLSPR >gi|302034471|gb|GL383164.1| GENE 86 108403 - 109233 388 276 aa, chain - ## HITS:1 COG:ML1644 KEGG:ns NR:ns ## COG: ML1644 COG3346 # Protein_GI_number: 15827867 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mycobacterium leprae # 8 261 12 266 270 108 31.0 8e-24 MKKLWVRWVALTLLVIVLSLVMIRLGQWQLHRLSGRREANNIIRTNHSKPPVEWSTLMGD HEVTPQQQWRPVTITGTFDTAHELQVRYRSNDDDNGSEIVTPIVTKDSRHVLIDRGFLKR SSHEGDAQTLPPAPNGVVTVTGLVKGNEHGKPTATDPVEGKVRLINSDAIGKAQGITYVS GYISTTSMAPAQRDLVPHELPKLDDGPHLSYAIQWFCFTAIAVIGLFVLIRGDIKDRRKR RAKAARSAAQRAVSGPEPNRHDASHNRGAKTPGAHT >gi|302034471|gb|GL383164.1| GENE 87 109312 - 109560 174 82 aa, chain - ## HITS:1 COG:no KEGG:PPA1534 NR:ns ## KEGG: PPA1534 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 82 33 114 114 157 100.0 1e-37 MRQRRYLWSMLVRTVCFIGLVITPSPWRWSFLVGAAVIPAIAVVLGNAADRRTTDTLPSQ QSTESQGELGSAMTIHGEVDEN >gi|302034471|gb|GL383164.1| GENE 88 109735 - 110454 240 239 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 8 233 4 238 242 97 30 6e-19 MSLDTPGRVALVTGGSRGIGAAIAADLHAQGYRVAATSRSATAPEGVLPIACDVTDADSV DVAFSQVEQELGPVEVLVANAGITRDGLLARMKEEDFTEVIDTNLTGAYRVIRRAARAMT RARFGRIVLTSSVVGLLGSPGQVNYAASKAGMLGMARSVTRELGSRGVTCNLVAPGFIST DMTEGLPEKLVSGYLERIPAKRLGSVDDVVAVVRFLVSDAASYVSGAVIPVDGGLGMGH >gi|302034471|gb|GL383164.1| GENE 89 110495 - 111268 722 257 aa, chain + ## HITS:1 COG:ML1806 KEGG:ns NR:ns ## COG: ML1806 COG0623 # Protein_GI_number: 15827964 # Func_class: I Lipid transport and metabolism # Function: Enoyl-[acyl-carrier-protein] reductase (NADH) # Organism: Mycobacterium leprae # 2 254 3 266 269 212 45.0 7e-55 MGLLEGRTVLVTGVTMHTSIAFKAAQIAQDEGARVIVSNLPRAVGVTRRAVRKLDPVPEV LELDVTDADQLAALPQQLRDLGVEKLDGVVHAIAFANPKTALGGKFLETEWDDVSVAVHT STYSYVSLMTALVDILAEHASVVGLTFDATVSWPFYDWMGVAKAGLESANRYLARYLGPK GVRCNLVSAGPLDTMAKTAIPGADAFNDVWGERAPLGWDTKDTTPAAKGIVALLSDWFPA TTGEIIHVDGGMGSTGA >gi|302034471|gb|GL383164.1| GENE 90 111274 - 112008 403 244 aa, chain - ## HITS:1 COG:no KEGG:PPA1531 NR:ns ## KEGG: PPA1531 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 244 1 244 244 399 100.0 1e-110 MLEICCRLTCLLNDLCAGRTTAPHAEAELLRMAAAHHVHDPDETLGLSEHDPLSSVPIRM ALARISHVPHDTPVLWGLLLPAPGQLAGLRGPAQVNRAALDAGAVVVCHQGSTTMPAGTA WIPHPVGSAMQWTVVRAVAPLPPPTPADAAPLLRSAICATAAQLNELSMMGGRRPDVVPP YLTGHRPADQRLLDSAWTVMMACDAGRESTMITAYGAQTRETALRQLRNAASQAVTAATS WPLT >gi|302034471|gb|GL383164.1| GENE 91 112123 - 112908 197 261 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 1 233 1 224 305 80 27 6e-14 MSAAAQLAGVGVRRGDRWILDNVNLDVLDDQRWVLVGPNGAGKTTLLQVLGAQLHPTVGL VEILDEILGAVDVFELRPRIGMACSVLAHRIPESEKVGNMVVSAAWAVVGRWREAYDEQD LARADALLERMGLGGMGDRMWGTLSEGERKRVEIARALMTDPELLLLDEPAAGLDLAGRE QLIEVLSAIFTDPDAPASVLVTHHLEEIPAGITHALVMAEGRIVAAGPVETTLTSEVLSG AFGMPLMVSHIDGRWNARAAR >gi|302034471|gb|GL383164.1| GENE 92 112935 - 113402 336 155 aa, chain + ## HITS:1 COG:ML1803 KEGG:ns NR:ns ## COG: ML1803 COG1585 # Protein_GI_number: 15827961 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Membrane protein implicated in regulation of membrane protease activity # Organism: Mycobacterium leprae # 11 147 5 140 143 77 37.0 8e-15 MLESFGEHRWLLWAVASAVLACTEMLSGEFTLLMLAAGAGAGAITAAIVPGMWLLQVIVA AVVAALLLTVLRPTLLRRVREAPGYRSALDKLVGSDGVATSDITDGHGQVKVDGEEWSAR ALEPGSTIAAGEKIEVYEIDGATLVVYPVFRSLSS >gi|302034471|gb|GL383164.1| GENE 93 113483 - 114649 1134 388 aa, chain + ## HITS:1 COG:MT1533.2 KEGG:ns NR:ns ## COG: MT1533.2 COG0330 # Protein_GI_number: 15840949 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Mycobacterium tuberculosis CDC1551 # 9 314 13 325 381 297 50.0 3e-80 MPQFIPSLVIIVLLVVVLSSSIKIIHQQKIGLVERLGKFNRRLNPGPHLLIPIIDRVQHN LDMREQVVPFPPQGVITEDNLMVKIDSVIYFQIVDPERAAYEAQSYKTAIEQLTMTTLRN IIGGMDMEAALTSREEINQKLRSVLDEATGKWGIKVNRVELRAIEPPPTIRDAMEKGARA ERDKRAAILLAEGQRQSQVLSAGGDRESAILRAQGDREAAVLRAQADRQAQMLRAEGEAQ AITTVFNAIHAGQPDQGLLAYQYMQMLPTLARGDSNKVWVVPSELNDALKGIGSLAGKDE HEPGKGGFAAADPSQFAAPEKIDVFAEIEAQKAEEKEASEATVQQAIQEAAKLENPGLSG KRSMGGGQITPAPAEQQTISEQGSGQVE >gi|302034471|gb|GL383164.1| GENE 94 114847 - 115833 892 328 aa, chain - ## HITS:1 COG:Cgl2983 KEGG:ns NR:ns ## COG: Cgl2983 COG0385 # Protein_GI_number: 19554233 # Func_class: R General function prediction only # Function: Predicted Na+-dependent transporter # Organism: Corynebacterium glutamicum # 12 322 10 317 326 280 52.0 2e-75 MSSANPRRTLPIDGFVLAIVVTAIIGSMLPATGSAVPVVKHGVTVLIFILFFLYGARLEP RETLDGLKNWKLQGAILASTFVVFPLIGLAMRALVPWALPSTLYVGMLWICLVPSTVQSS INFTSIAHGNVAGAIVAATTSNLLGTFLTPLLALLLMSTSGGLTIQPSSFLDVIVQLLLP FVLGQLSRRWTADFVTEHRKSLKYVDQGSIILVVYSAFSEGMREHMWSLVSPASMVVLTL ICLALLFFMLWLTWTGSGWLNFNRNDRIAIQFCGTKKSLATGLPMATVLFAGQPVGLIVL PLMIFHLAQLIACGMLAGRYARQWEVEQ >gi|302034471|gb|GL383164.1| GENE 95 115866 - 116675 198 269 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 [Bacillus selenitireducens MLS10] # 75 267 49 242 255 80 29 5e-14 MATFIDIDDPADPRLADYVNLRDVNLRKSLEAEHGLFIAEGAKVIRRACEAGYPPRSFLL APRWIDGLRDLFDGLDVEVFVVSETLAEQVTGFHVHRGALASMCRQTRWSAADLMAARRL VVCEDIVDHTNVGAIIRCAAGIGWDGVLLAPRAADPLYRRAIKTSMGTVFQLPWARLEDW AGGLGELRDHGFTVAAMALSGDSVTLDEFSADLRQNPRKVALLMGTEGAGLSAHWISQAD VVVRIPMAGGVDSLNVAAAAAVACYELRG >gi|302034471|gb|GL383164.1| GENE 96 116682 - 117284 389 200 aa, chain - ## HITS:1 COG:Cgl2682 KEGG:ns NR:ns ## COG: Cgl2682 COG0242 # Protein_GI_number: 19553932 # Func_class: J Translation, ribosomal structure and biogenesis # Function: N-formylmethionyl-tRNA deformylase # Organism: Corynebacterium glutamicum # 20 177 2 162 193 121 41.0 7e-28 MHKHTPNDNPLWEDLFKGGSLRRVTRWGESVLHAQTRPVTEFDEDLTTLIRDMFATMNAA DGVGLAATQVGVDLSLFVYACPDANNIVHHGAFCNPVVTLPEGHDRHLEAADEGCLSWPG GFQSMARPDLATCTGQDPWGNDITVTGTGFFARCLQHETDHCNGIVFGDRLSKRARRKLD EQHDSVAHLYPDDWPLTPKG >gi|302034471|gb|GL383164.1| GENE 97 117351 - 118433 501 360 aa, chain - ## HITS:1 COG:RSc0049 KEGG:ns NR:ns ## COG: RSc0049 COG2706 # Protein_GI_number: 17544768 # Func_class: G Carbohydrate transport and metabolism # Function: 3-carboxymuconate cyclase # Organism: Ralstonia solanacearum # 80 357 147 411 418 66 28.0 8e-11 MAVTPVLACYRTCDAAIGGITAWQVTTGPDGPRTNVVGSCPLGDASWVTPLYHLVVVLCE RDGTLVVVHPGREFQVVGTVQLKGQWPCHGAVDPTGRLMAVADYASGQVEFVDLSDPTRP TVRNVLDLGQGCVFPRPVADRQEGPHAHQVTWLDRAHLAVTDLGADRINVVRWSEAGPEI IGSLKTPAGCGPRHLTLTEDGRKQILTVGGALSGTVSTWSRPTGHDMWAREWRFVQETAS SRWSHTGSQERRSACAPASPSAIVTTPDGRHFVANRSVGSIGILGGRFGRINLIDEFDTT GANPRDITVTTQNGTRVWVALPEEGQIAIHLRDEDTGGWQVETTIDQPGAMRVIVGPTTG >gi|302034471|gb|GL383164.1| GENE 98 118358 - 118600 100 80 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|314923771|gb|EFS87602.1| ## NR: gi|314923771|gb|EFS87602.1| hypothetical protein HMPREF9603_00728 [Propionibacterium acnes HL001PA1] # 1 75 44 118 118 123 93.0 5e-27 MQTDLLMSSVIVTDRDLRQLIFQLWITRQHRTSPPVDNRLTFFSLVSPRSRVGSHPWLSP QFLPVTALAMPQSEALPRGR >gi|302034471|gb|GL383164.1| GENE 99 118581 - 119339 224 252 aa, chain + ## HITS:1 COG:Cgl1980 KEGG:ns NR:ns ## COG: Cgl1980 COG0739 # Protein_GI_number: 19553230 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Corynebacterium glutamicum # 46 168 42 164 164 90 44.0 4e-18 MRRSVCISLLIITVGICLLALPAPSHSVAAVPARSVANRPTPPVLGPVIKGFAPPAEKWL PGSRGVEFAASVGEPVTTVTAGVVVFAGQVAGAGVVSILLADGRRTTHMPVVPSVAVGQV VVPGQQIGVVGMGPPCTRTCLHWGLKKGDVYQNPMTLLQLQVRLLPLDSRPHSASGHGWP VRPLSLPGGSKRKAASSGALMPPWRGAGRDAALGIDTTVTEATRGGSGAGMSLAKRSAQS FGGNVGVDLRGG >gi|302034471|gb|GL383164.1| GENE 100 119259 - 120206 520 315 aa, chain - ## HITS:1 COG:Cgl1981 KEGG:ns NR:ns ## COG: Cgl1981 COG0582 # Protein_GI_number: 19553231 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Corynebacterium glutamicum # 2 315 13 315 315 228 43.0 1e-59 MKKPSPTRVGAGQLPMSLTVPVEDFCGHLSALRRSPNTIRGYRADLIDLMGHAHSHGDDT LGRIGTSQVRAWLADTRVAGASAATMQRRWSAARVFFRWAANEGLISADPTTALNSAKVP KRLPATLGVDQARHILDEAVAQARHDESPHGARDAAILEVLYGGGLRVGELCGLDLGDVD RSRRTVKVTGKGDKERTVPMGAPALRAIDTWLPRREEWVGPHSGQALFLGARGRRIDQRV VRRVVHTDLRAEPDSPDLGPHGLRHAMATHLLEGGADLRTVQDILGHESLATTQIYTHVS TERLRTAFRQAHPRA >gi|302034471|gb|GL383164.1| GENE 101 120494 - 121345 1436 283 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50842999|ref|YP_056226.1| 30S ribosomal protein S2 [Propionibacterium acnes KPA171202] # 1 283 1 283 283 557 99 1e-157 MAVVTTRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLHQSLTYIDKAYAFVKET VAKGGQILFVGTKKQAQESIVEQATRVGMPYVNHRWLGGMLTNFQTISKRIARLKELEAM DFDKVSGSGLTKKELLMLSREKDKLEKDLGGIRDMPKVPQAVWVVDTKKEHLAIDEARKL KIPVVAILDTNCDPDEVDYAIPGNDDAIRSVSLLTRIIADAAAEGLMARSAGKSGEQPAE AEPMPDWERELLEGDGAKTEAKAEEPKAEAKKADEAPEAEKSN >gi|302034471|gb|GL383164.1| GENE 102 121380 - 122192 428 270 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts [Haemophilus influenzae R2866] # 3 270 4 262 283 169 38 1e-40 MAITAAEVKKLRDATGAGMMDAKKALTEADGDFDKAVDILRVSGAAKAAKRSDREASNGL VAAAGSSLVHIGSETDFVAKNEEFIAAAHEIAEAADKAGADSKDAANAAALADGTTVGDK LGELAAKIGEKIELANAAHFDGNAHVYLHRRSQDLPPQVGVMVEYEGDNIEAVHGVCLQI AAMSPRWLSRDEVPADVVEHERTVAADIAREEGKPEKIIDRIVEGRLGGFFKENCLLDQP AISDDKKTVAQTLEAAGVTLKRFVRFSAGE >gi|302034471|gb|GL383164.1| GENE 103 122377 - 123090 602 237 aa, chain + ## HITS:1 COG:Cgl1977 KEGG:ns NR:ns ## COG: Cgl1977 COG0528 # Protein_GI_number: 19553227 # Func_class: F Nucleotide transport and metabolism # Function: Uridylate kinase # Organism: Corynebacterium glutamicum # 9 235 1 226 228 298 67.0 6e-81 MPERYNRVLLKLSGEVFGGGGIGVDADVVSAKAREIAEIANSGVQVAVVVGGGNFFRGAE LQQHGMQRDRADYMGMLGTVMNCLALQDFCEKAGVDTRVQTAITMGQVAEPYIPRKAERH MEKGRVVIFGAGSGMPYFSTDTVAAQRALEIGADALLMGKQGVDGVYDSDPKTNPNAHKF DELTYDEFLSRDLKVADATAVAMARDNDLTMVFFNLEMPGNISRVINGEDIGTTVHR >gi|302034471|gb|GL383164.1| GENE 104 123123 - 123677 717 184 aa, chain + ## HITS:1 COG:Cgl1976 KEGG:ns NR:ns ## COG: Cgl1976 COG0233 # Protein_GI_number: 19553226 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome recycling factor # Organism: Corynebacterium glutamicum # 1 184 2 185 185 186 52.0 2e-47 MSDIIKDAEKKMGSAVDHAREEFAAIRTGRANPAMFNKLMVEYYGTPTPLQQLASFQVPE ARTVLIAPFDKSCVNDVEKAIRDSDLGVNPSNDGNVVRCVLPALTEERRKEYIKMAKTKA EEGRIAVRNVRRASNDVVKKQEKDKEISEDEMTRLEKELDQVTRKYVEQIDELLKSKESE LLEI >gi|302034471|gb|GL383164.1| GENE 105 123833 - 124552 549 239 aa, chain + ## HITS:1 COG:ML1589 KEGG:ns NR:ns ## COG: ML1589 COG0575 # Protein_GI_number: 15827833 # Func_class: I Lipid transport and metabolism # Function: CDP-diglyceride synthetase # Organism: Mycobacterium leprae # 59 238 116 311 312 148 45.0 7e-36 MTLALMAGAIELHRAMVRLGMDSAVVPICVGTAVMVIGAYAASTLKLHILPNTFLVVTLG ATTVAAMAWRLPRGSHGFVKDAAASLFTIAYLPLLGCFVPLMMGDDGGSRRIATWILSVV ASDTGGYAVGVLCGKHKLAPRISPKKSWEGFAGSVITAAFVGWACLGGLLSAPWWAGIVL GVVLALTGTAGDLVESMIKRDAGIKDMSNFLPGHGGVMDRLDSVLFSAPFAWLVMSLVL >gi|302034471|gb|GL383164.1| GENE 106 124636 - 124809 174 57 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGAKMDIIIMVLIAALVLTMILRGVRKSIFIVSVMVIAALCVILLSLHATSDLGLSW >gi|302034471|gb|GL383164.1| GENE 107 124803 - 125453 425 216 aa, chain + ## HITS:1 COG:STM1864 KEGG:ns NR:ns ## COG: STM1864 COG1495 # Protein_GI_number: 16765205 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Disulfide bond formation protein DsbB # Organism: Salmonella typhimurium LT2 # 45 192 26 167 204 76 34.0 3e-14 MVRNYDIEVESLSDAERTPSRAGRVFPIVGFWGANLFVLAYIGVLAGGFIVQFGLHEFPC PLCMLQRYSMMLASLGPLYIIVRTRRGSVTMADFCLGYGVSILSAVLGAAESARHILLHI QPGDPGYGSKAFGLSTYTWAFITFTIVIAFCGVMMTFAPWLTPRGVKAHAISTVIMWLFA LIVVANLVMIVFLEGLHFLLPGDPACYELVQNCSPR >gi|302034471|gb|GL383164.1| GENE 108 125613 - 126743 878 376 aa, chain + ## HITS:1 COG:Cgl1973 KEGG:ns NR:ns ## COG: Cgl1973 COG0820 # Protein_GI_number: 19553223 # Func_class: R General function prediction only # Function: Predicted Fe-S-cluster redox enzyme # Organism: Corynebacterium glutamicum # 3 367 10 362 366 390 55.0 1e-108 MVNTPNRAKPPRHWIDLSIEERVQAVKDFGVPAFRARQISAHVFERWEVDPTQWTDLPKA ARQEIADAWFPVLLTKVSQQSCDRGTTVKTLWRLHGGALVESVLMYYPATRHSAARATLC LSSQAGCGMACPFCATGQGGIQRNMSTAEIVSQVLAANRLIAAGEVPGASGRVHNIVFMG MGEPMANYRSVLTAIRTLTADGPDGVGMSARALTLSTVGLVPRIKALTQEGIPVTLAVSL HAPDDELRDELIPVNRRWKVDELLDAAWHYAEKTKRRVSIEYALMKDINDQADRAAVLAR QIRRRGDWTWAHVNLIPLNPTPGSRWTASRPEDQDAFVETLERWKIPVTVRDTRGSEIDG ACGQLAAVGRSEGLGS >gi|302034471|gb|GL383164.1| GENE 109 126828 - 127274 425 148 aa, chain + ## HITS:1 COG:SMa0228 KEGG:ns NR:ns ## COG: SMa0228 COG0334 # Protein_GI_number: 16262575 # Func_class: E Amino acid transport and metabolism # Function: Glutamate dehydrogenase/leucine dehydrogenase # Organism: Sinorhizobium meliloti # 1 144 3 149 448 200 67.0 9e-52 MDRQLENAYESVLRRNPGEAEFHQAVREIFESLGPVLDTNPQYVEAAVLSRICEPERQII FRVPWVDDEGKIRINRGFRVEYSSVLGPYKGGLRFHPSVYLGTIKFLGFEQIFKNALTGM PIGGAKGGSDFDPHDASRLRSCDSASPS >gi|302034471|gb|GL383164.1| GENE 110 127250 - 128164 885 304 aa, chain + ## HITS:1 COG:SMa0228 KEGG:ns NR:ns ## COG: SMa0228 COG0334 # Protein_GI_number: 16262575 # Func_class: E Amino acid transport and metabolism # Function: Glutamate dehydrogenase/leucine dehydrogenase # Organism: Sinorhizobium meliloti # 1 304 144 448 448 443 70.0 1e-124 MRFCQSFMTELYRHLGEHTDVPAGDIGVGSREIGFLFGQYKRITNRHESGVLTGKGLTWG GSLVRTEATGYGTVFFVQRMLATNGKSLDGLRVTVSGSGNVAIYAIEKAQDLGATVVACS DSSGYVVDEKGIDVALLKQIKEVERARICEYAARRDSATFHSDGSIWDVPVDVALPCATQ NELNGQAAATLIRNGVVAVAEGANMPCTPEAVHSFQDAGVIFAPGKASNAGGVATSALEM QQNAARDSWDFDATEARLQQIMADIHDRCIETADEYGHPGDYVMGANIAGFTKVADAVIA MGVV >gi|302034471|gb|GL383164.1| GENE 111 128142 - 129233 793 363 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4579 NR:ns ## KEGG: HMPREF0675_4579 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 363 1 363 363 700 100.0 0 MSTTHIEIETVDQLRAAAPNLAGQVVQGVDLTGCSNLLRHCDVSTTIFLGCSTSARLAAW LRARGALIFPAIPGVPFDPYHPGAYTAEELYNDIGEGYHVTLDAAIDRWRRGLATPPRLR DTLATALHDDAMTDALDDLLAGTDPSMTVGVMGGHSVTRDSDDYRLAADLGAALAGTGHL VTTWGGPGAMEATNLGAACPPDLLDESLDRLRKVAGTADVTTWVQAGLDVVSSWPQGAAH RTIGIPTWFYGHEPPNVFATSIIKYFSNALREDILLNRCRGGIIYLPGQAGTVQEIFQAL TGNYYATSEDEMTPLIMLGNRYWSQTLPAWPLLHSMSRDHPHRIRLVDTVDEAVAALRRH PSR >gi|302034471|gb|GL383164.1| GENE 112 129230 - 130603 773 457 aa, chain - ## HITS:1 COG:SMb20965 KEGG:ns NR:ns ## COG: SMb20965 COG1680 # Protein_GI_number: 16264838 # Func_class: V Defense mechanisms # Function: Beta-lactamase class C and other penicillin binding proteins # Organism: Sinorhizobium meliloti # 23 302 42 318 332 82 27.0 1e-15 MTDSVLDVTADALEQAGAHPHRLVVRQHGQVVGRRRWAPWSPDVPSLVYSCSKTFTSAAV GIAVNRGAFGYDDTLADLWPQACTANTGPVAKSMTVRNALSMSTGHSPEQLLEPTLMSRR LPDLNTARILLATEPEGRPGIDFAYNNLATWMLSRLVAQHTGEDVDTIITKEVLDPIGAG PHTWVRDADGIPMGFSGLHIDAEDLSLFGQLLLDDGVHEGARLLPEEWIRQHRVRQVNCD SETDPEWGMGYGWQTWMSSHGYRLDGAFGQYVLIVPEVDAVITMTNEASEGPGDKQAILQ AVWDHLLPALADGFQPQPEEIVRTVPTVTGEFDSARSVQGIAPDGSYIVVSPHKESRTWA MSWRCPGTFSHPTDETLDIAVGYEEWQTSHCRVGDDAIDIATSGGWQGETFVARLCVIST PHTLTLRMTPEATTTEWDNEPLNPGGLLGLVHPELRR >gi|302034471|gb|GL383164.1| GENE 113 130691 - 131914 753 407 aa, chain + ## HITS:1 COG:Rv2870c KEGG:ns NR:ns ## COG: Rv2870c COG0743 # Protein_GI_number: 15610007 # Func_class: I Lipid transport and metabolism # Function: 1-deoxy-D-xylulose 5-phosphate reductoisomerase # Organism: Mycobacterium tuberculosis H37Rv # 3 397 37 405 436 333 54.0 3e-91 MKKVIILGSTGSIGTQTLEVISSRRDQFEVAGISAGGSDVGSLAQQIIDFSIPVVAVARE DAAEELQRALAVQAGSRGRIVPNPRILTGPDASTELAAMPADVVCNAITGAAGLRPTLAT LAAGTTLALANKESLVIGGRLVTQAAASGQIVPVDSEHSAFAQCLRGGGRNEVRRLVLTA SGGPFRGRDRASLADVSAAEAMKHPTWNMGRVITINSSTLVNKGLELLEAALLYDVDLDD ITVVVHPQSIVHSMVEFWDGATIAQASPPDMRLPIALGLSWPDRLPDAAAGCDWSTATQW TFEPLDNDTFGAVELARRAGHAAGTAPAVFNAANESCVDAFCAGSIGFLDITDTIAAVLD EHLSGDENDTLGARHVGDEALTLDAVLAADAWGRRRAAEVCARGIRR >gi|302034471|gb|GL383164.1| GENE 114 131911 - 133191 709 426 aa, chain + ## HITS:1 COG:Cgl1968 KEGG:ns NR:ns ## COG: Cgl1968 COG0750 # Protein_GI_number: 19553218 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted membrane-associated Zn-dependent proteases 1 # Organism: Corynebacterium glutamicum # 7 426 5 403 404 218 35.0 3e-56 MIVVVEVLAGIVFFGLIILSVLLHECGHFIPAKIFGVKVTEFFAGFGPKIWSFTRGETEY GFKWIPLGGYVRLIGMYPAKVHHRHSNRLTRFADEARVAEVEGITDADQGRLFSDKPVWQ RLIIMSGGILTNLLLAFLLFWAVFGIHGRADQTTTVAAVIPCAHSAQTSGPCSKEDRRAP AAEAGVRAGDRIVSFNGRQVDSWSQLQEFIRGNGGGEVRLGVERDGAFVSLTPTHTLLTK VPDLSTPGRTVEAGYLGVSPTMVIVHSGPGDTVSQMWTMSKQSLSALARLPVLTWNVASD LVTGQARDANSPMSIVGASRVAGDVAGDSQLTLGDKIATGASLLGGLNLFLFWFNVVPLP PMDGGHIAGAIYEAGKRGLFKLARKPDPGPADTAMMLPVAWTIGALMLMMGLVLVVADVV SPVKIF >gi|302034471|gb|GL383164.1| GENE 115 133494 - 133994 148 166 aa, chain + ## HITS:1 COG:Cgl2538_1 KEGG:ns NR:ns ## COG: Cgl2538_1 COG2374 # Protein_GI_number: 19553788 # Func_class: R General function prediction only # Function: Predicted extracellular nuclease # Organism: Corynebacterium glutamicum # 1 91 712 801 816 69 39.0 3e-12 MLGDFNAYAMEDPIRARKAAGFSEVVEEYDPDAASCEFSGRVGSLDHIFANAKAHELVSG AGIWDTNGSESVAMQYSRRDDIVADLHHQPVRCIGTLASPGGLLYADSGPQPSIDGVLDS GGDLGSRFGRPEHGCRGPDFRTRVRISATPATYRSLIRLLLASLPG >gi|302034471|gb|GL383164.1| GENE 116 134108 - 134827 492 239 aa, chain + ## HITS:1 COG:SP0716 KEGG:ns NR:ns ## COG: SP0716 COG0819 # Protein_GI_number: 15900613 # Func_class: K Transcription # Function: Putative transcription activator # Organism: Streptococcus pneumoniae TIGR4 # 12 231 1 217 222 180 44.0 2e-45 MNAFTPSLPAPLTTAGIAVAPSGRVAALSAGRSEAWTAAINHRFVNELFSGELDDAQLSY YIIQDNQFFVPFLELLGEALVRADTVEAKLVFGRQLGMICSEESGWFEATFDELGVSQAD RAHPHLSEPTRSFENLMHKAVNTHHYPTVLVLLVVAEGLYLDWASRTDAPEPGANLPNKF LGWVDLHRGDEFRTWVQFLVDELERASGQVDLEELTRFWNVAVDLELAFFNDVPFPLEG >gi|302034471|gb|GL383164.1| GENE 117 135014 - 136156 880 380 aa, chain + ## HITS:1 COG:MT2936 KEGG:ns NR:ns ## COG: MT2936 COG0821 # Protein_GI_number: 15842410 # Func_class: I Lipid transport and metabolism # Function: Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis # Organism: Mycobacterium tuberculosis CDC1551 # 1 369 1 369 387 537 74.0 1e-152 MTVNLGMPTPPVPTLAPRRKTHQIKVGDVLVGGDAPISVQSMTTTKTHDVGATLQQIAAL TAAGCDIVRVACPTDKDAEVLPIIAKRSQIPVIADIHFQPKYVFQAIEAGCGAVRVNPGN IRKFDDQIESICQAATEHGTSIRIGVNAGSLDKRLLDKYGAPTAEAMVESALWEASLFEQ YGFRDFKISVKHHDPVVMIRAYEQLAAKCDYPLHLGVTEAGPAFQGTIKSAVAFGHLLAE GIGDTIRVSLSADPVEEVKVGIKILESLNLRPRGLEIVSCPSCGRCQVDVLTLANDVTDA LEGIDAPLRVAVMGCVVNGLGEGREADLGVAAGNGKGKIFKHGEVIRTVPEGEIVQFLVQ EANRMADEMDTTGAVEVTVS >gi|302034471|gb|GL383164.1| GENE 118 136446 - 137003 329 185 aa, chain + ## HITS:1 COG:MT2935 KEGG:ns NR:ns ## COG: MT2935 COG3393 # Protein_GI_number: 15842409 # Func_class: R General function prediction only # Function: Predicted acetyltransferase # Organism: Mycobacterium tuberculosis CDC1551 # 7 184 107 282 284 106 38.0 3e-23 MGADVAVLPLYERLAQIGPDTWGRPREVRSCQPLLAMSDRPRVVPDARVVRINERHFEPY FRAAVAMYTEEVGVSPLDPGDGYRRHMLELVRQGRGLGIVDDGDVRWKSDVAVTWGNVCQ IQGVWMDPAWRGRGLAAPAMAAVVELARRDHDTVSLYVNDFNTRALRTYRRVGFERIGTM ATLLY >gi|302034471|gb|GL383164.1| GENE 119 136997 - 137935 716 312 aa, chain - ## HITS:1 COG:lin1962 KEGG:ns NR:ns ## COG: lin1962 COG1108 # Protein_GI_number: 16801028 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Listeria innocua # 18 277 12 271 280 166 40.0 4e-41 MLSPLDFLSDLTNPLLSFLPKALLVALVCSVVAGVIGSHVVLRGMAFIGDAVAHSVFPGL AVAFLMQGSLLLGGSIAGLTTAILVAVVSQNRRLKEDSVIGILFVGAFALGIVIISRAPG YSGSLQQFLFGSITGITDDDIVMVCVAGALVLALEWAVHKELVTVGLDRETARASDLPVF ALDLLLYVLVTMTVVISVQVIGNVLVLALLVTPAATARLLTDRLGQMMVLAPVIGGFSAL VGLYLSWSIDLPAGGTIVLVATAVFLACWLVAPRGLLALRLDCTAPHHRHARVADDTHRA HLEVGLHVTDPQ >gi|302034471|gb|GL383164.1| GENE 120 138014 - 138706 298 230 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 9 221 7 225 318 119 33 1e-25 MNDLGSIKITDVAVNVGGLQVLHDVNISASKGDLLALLGPNGAGKTTILRTMLGLVKPAK GTVKVAGASPGKGWRHIGYVPQRHEFAWDFPISVAGVVMSGRTRHIGWLRRPCKDDHIAV RDALRTAGMAELANRTVGELSGGQRQRVLIARALATRPSVLLLDEPFTGVDMPTQEQLTE LFIELSGAGTTLVMTTHDLAQAMATADRVCLVNRTVIADSTPQQLRDPAM >gi|302034471|gb|GL383164.1| GENE 121 138703 - 139713 655 336 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4569 NR:ns ## KEGG: HMPREF0675_4569 # Name: not_defined # Def: actinobacterial surface-anchored protein domain protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 336 5 340 340 578 100.0 1e-164 MINRPLAALSAMFIALATGATLSQPAQASPTIPPDPALKQTISDNEKVAKGPAEIKRGHV DIGPRIVDGKFSLMARDDSANPPVWRNTDDTVLRVADASRIDVPNDDTYSFLGDMRGEKA YVIPQTQDQKVVWLGWNTQAPEIVKNFPRGADLVFTGHEGPGQAHMFIETGFDSPMPLYN STKPGEQLVHMEANTHVHANWVFSDPGAQTISVDARGTDDTGVKHSYSTKLRFAVGDKGP ANEARAVGPSPSVAASSSSTAAATNVSAPATTENSFDDSGAGTLWGPGIMAGALIIGIII AALVGRSRSKTLRDEVWNEEHTGASEAHKDVGNESR >gi|302034471|gb|GL383164.1| GENE 122 139734 - 141257 968 507 aa, chain - ## HITS:1 COG:BH0516 KEGG:ns NR:ns ## COG: BH0516 COG0803 # Protein_GI_number: 15613079 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Bacillus halodurans # 337 506 127 298 300 103 31.0 8e-22 MKKRLLCLVAALSLLAGFGHAPTSRDKLSIVTTTPILADLTRQVAGDRATVTSMVPSGAD PHTYEPSLRDVRTVVYSRVALSNYLMLEPHSVIKTIDSSLPTGSINVSLAEEAQKYGAQV IPLVENANLDTVWLGLRVIGKGARRGSDRSSSVHLQLTSVEGPGDLTAYITGTFGRPQIY YSTADGVDERDDVELPTDAHTHMSWAFSKPGVYKAVFAATLSTPQGNASFGAQTLTIAVG ADPRTIPELADRTVVDQGHADLSADIDEGTMTILSDPTGGGVRTQKRLDPDKTVVWVPPK ALTEIPPSPAFRFLGHPGSPIHQLPQAVLGAHVHGEIDPHLWMSIKNTKAYVQVIRDSLI KADPHEAQTYRENAKRYLTRLEETSHYVDRKIASIPRGRRQLITSHDAYGYLAQAHGMHI AGFVTANPGVEPSMAQRRKLNQTIADLKVPAVFLEPNVLRGSSVLAAIAAENSVTVCPIY GDTFDDHVTNYIDLMRFDADSLAKCLG >gi|302034471|gb|GL383164.1| GENE 123 141254 - 143896 1625 880 aa, chain - ## HITS:1 COG:no KEGG:PPA1500 NR:ns ## KEGG: PPA1500 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 880 1 880 880 1593 99.0 0 MEATVKRFASLLAALLTFLMINPSSANAAAPDQELLHNGHVDAALTEGDQATDRPTTQVL GDSNDLNDRYSTDISPSPDADDSTVLDHGHADIFRVGSAPDGGIDLKLKEDVTGDGALHA PENVLLKIKDSALTDIPATLPGAPQGYVLPLTQNQDLLWPGWETFDVKRNGFDSVKITVS NVKGPGKVHLFSQGSFGAVQPLLDGNATELPGTITVAQPSHVHANWVFGKTGVYTMTVQA TAHRSGKKFQTTPHTYTWVVGDTTPLPEPWGKLTPPPTPTPSPTPSITPPKTSVAPKPTP ARPQKRSQPREQTRKPVLKPKANKTPCTQRLVLDHGHSDVFRVGSAAKNGLDLKVEEDVT GEGVLHAPESVLLAVKDSALTTIPRGYPGAPKGYLLPMTQNQNLLWPGWETFDVKRNGFS DVKINVRNVKGPGKVHLFSQSSFGNVQTLLDGGSHTMPGTITVEQPSHVHANWVFTQPGL YQMTVDATAVRNGTTVSTGAHTYTWAVGSMAIAANSCSTDRVAGSPARSNTGTPAPEKDS NRGSSDKPFDDLGVIHNTLENDSASSNGSTRVTRSGSSIKKEICHPVKIPNKAAAVKKTV ARSAGQSAAIATEGHFDWGVQLQPGKLISALKDDRSAPATWVDPSSIVMAVGDKANTTAP AGMEFIAKGGTKVWLIGATQVPGVPWLGVNTMHESIINGTTGPVHMHLDKVSGPGKMAVF MSGTFGGGVGQRAFDNVGGPTGYTVPANTHAHPNWVFTAPGHYTVTVTQSATTKSGKKLS ATGTLHFAVGINASPVAASLGKLSASPKTDQNADPGYTIVGRTPDGKPCDLKAAGLPGSG ENGEFGDTGIVSHTNQGLVSGTFVVLGVAGALLLARRRRG >gi|302034471|gb|GL383164.1| GENE 124 144066 - 145823 1407 585 aa, chain + ## HITS:1 COG:Rv2845c KEGG:ns NR:ns ## COG: Rv2845c COG0442 # Protein_GI_number: 15609982 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Prolyl-tRNA synthetase # Organism: Mycobacterium tuberculosis H37Rv # 1 570 1 566 582 684 64.0 0 MLTRMSQLFVRTLREDPADAEVPSHRWLVRAGYIRRVAPGVYSWLPLGLRVMRRIEAICR EEMASIGAQEVSFPALLASDPYKETGRWVEYGDNLFRLKDRKGVDMLLGPTHEEMFTLMV KDLYSSYKDLPLCLYQIQNKYRDEARPRAGILRGREFVMMDAYSFDVAQEGLDEAYQAQR DAYIRIFNRLGFDYAIVKAMSGPMGGSRSEEFLAVAANGEDTFVRSSGGYAANVEAVRMA VPDPLPIDGLPEAEVVDTPDARTIESLVRIANEVRPRADRPWTGADTLKNVVFMVAHPDG TREPLAIGLPGDRDVDEKRLEAVLEPAVVEPFTEEDFAANPQLVKGYIGPGALGEDNSSK VRYLVDPRVVTGTSWITGADQKDRHVFNLVAGRDFTPDGVIDVAEIREGDPAPDGSGELH LARGIEIGHIFQLGKKYADALGLKVLDHNGKLVTVTMGSYGLGVSRAVAAIAEGTCDEKG LCWPREVAPYDVQVLATGKGTEILDEATRIASELAEAGLEVLLDDRKASPGVKFADSEIL GMPTSVVVGRGLKDGLVEVRDRSTGENRQVSVAEAVCAVLKEVRG >gi|302034471|gb|GL383164.1| GENE 125 145984 - 147735 1032 583 aa, chain + ## HITS:1 COG:no KEGG:PPA1498 NR:ns ## KEGG: PPA1498 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 583 2 584 584 1154 100.0 0 MPENEDELTRSVDKAARNTLGRRTFLGGVTLVAAAAVTGTTPALAHASKRLHSTSGTTLE QVGLLDPGSGYRRIKAQRGYPLVVREELARGKSGRDDRRDGLASFVQVTDLHVTDVQSPM RVEFLHPLAGPAFRPQEALGPLATASLVRRVNSLQGGPATGRAFDALVSTGDNTDNHEHV ELDWYLTLLAGGTIVPNTGARDRWESVQTFGNPLFYNPESHSSDIYKRAGFPQVDGYFRR VMAPVTSSGVKIPWYAVFGNHDDSIQGTLPSDWGLLKTMYTSDRKITGFASDNDTKAYLQ AAQGNGPVALSNDTVSLTRQITADERRVPFTPFEFIKAHLRDGVNGSGPHGHGFSEDDLN AVRGYYTFSIANGVTGISLDSTNRAGYTDGSIDDRQWKWLKSVLRAGSSVYYDDLGVRHH HDVSDTMFVLFSHHDSMTMNNPVLPGDGTGIRHLGPELVSLLSHYPNVLAWVNGHVHANN ITAHHHALDARRSWWEINTASHVDFPQMARIIELADNHDGTVSIFTTLIESNAPYQADYD TTDPDGLASLYREFGANDIHTRMGRLGTSVDHNTELLLAHPWA >gi|302034471|gb|GL383164.1| GENE 126 147821 - 148588 569 255 aa, chain + ## HITS:1 COG:RSc3337 KEGG:ns NR:ns ## COG: RSc3337 COG0730 # Protein_GI_number: 17548054 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Ralstonia solanacearum # 6 246 3 244 252 135 39.0 8e-32 MTSWVFAGLVLAAFMAGWVNAVVGGGGLIMLPSLLVGLPTETPVATIVGTNKVAQVVGNL TAGVGYLRKQRPDWRMFLWTAVLAGLGAVLGARIVTYMSRAVYTPILLVVLVIIGIYTWR RPSLGAGHNGEGGKHPILVPIIGLFLGCYDGAIGPGVGTFWVLTYVAVGGYSFLKASGMA KICNAVTNLVTITTLAIHGHVWWHIAWPLVISNVLGGLIGARAAMKHGNGFVRTMFLIVT SVLAVRMLVQLIWRV >gi|302034471|gb|GL383164.1| GENE 127 148619 - 149581 569 320 aa, chain - ## HITS:1 COG:no KEGG:PPA1496 NR:ns ## KEGG: PPA1496 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 320 1 320 320 526 100.0 1e-148 MIARRTILASGAAFVTIGLTGCGHNSPEKKATEKKTTPVRATTTASAPHRSDAVSTEALL ADLATKAARSVTDGQLTVLNQVAAAHRRHLEVLSQSNPFSGSTATPSAAISPTPRTAGQG SPLALLQHHEKAAATQYLEICQTAQDSSETLLWASLSVFCSAFNPSAPAPQPTPKVVPVT IGQEPLTNAQQALLTHLNALVAGLEWGIGRLGENDPLRTWGWDRREQVLAQRAEVRQSIR DASTTPTPDVPGYPMSPAPVNDAATRSLWSGLEANVLSGWGRVTAASGSAARPHAVASMV SQTQVLAHLGTGVTTWPGWV >gi|302034471|gb|GL383164.1| GENE 128 149710 - 150246 590 178 aa, chain + ## HITS:1 COG:Cgl1942 KEGG:ns NR:ns ## COG: Cgl1942 COG0779 # Protein_GI_number: 19553192 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 4 168 7 160 178 63 31.0 1e-10 MNAERLTRLLEPVVSQVGLELDRVDVVPAGRRRLVRVTIDGDGPDGHGPSLDEISEATAE ISHCLDDSGAMGESPYTLEVSSRGVSTPLTQPRHYRRNIGHLVRFTLNPAEEQKSGETFD GRIAEAGEEVVTLEVEAENSKPHKPVYTTREVQLADVAKAVVQVELNRRDAQASKEEN >gi|302034471|gb|GL383164.1| GENE 129 150248 - 151219 616 323 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|17988250|ref|NP_540884.1| transcription elongation factor NusA [Brucella melitensis 16M] # 11 322 17 347 537 241 40 2e-62 MDIDLSTLRMIERDKDIPLDYLLTTLEDALLNAYDKTEAPVNGAKVQLDRKTGNVAVMLP EKDEEGQVVGWYDGTPEDFGRVAASTARQVIFQRLREAEDEQKYGHFSAVEGDVITGVVQ QSYRDTRTVRVDLGSLEGIMPPAEQVPGEKYSHGRRIRVYVVAVRKEARGPQVIVSRTHP NLVRKLFAMEVPEIEQGVVEIKALAREAGHRSKIAVVSHNPDVSAKGACIGPMGQRVRAV MHELDEEKIDIIDWSEDPAEFVGAALSPSKVSSVTVIDPKAKTARAIVPDYQLSLAIGRE GQNARLAARLTGWRIDIRPDNKV >gi|302034471|gb|GL383164.1| GENE 130 151299 - 151547 435 82 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|213961178|ref|ZP_03389457.1| LSU ribosomal protein L7AE [Propionibacterium acnes SK137] # 1 82 1 82 82 172 98 2e-41 MTTRPQRTCVGCRHVDDPANMARYVLVDGVVVADPTGHAQGRGAHVHVDDECWKRAVSGG FARSFRARVVVRSACQERLSAR >gi|302034471|gb|GL383164.1| GENE 131 151768 - 154662 2335 964 aa, chain + ## HITS:1 COG:MT2905 KEGG:ns NR:ns ## COG: MT2905 COG0532 # Protein_GI_number: 15842380 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation initiation factor 2 (IF-2; GTPase) # Organism: Mycobacterium tuberculosis CDC1551 # 2 963 4 899 900 837 56.0 0 MAKVRVYELAKELGLSSKQLLGKLNDMGEFVRSASSTIEAPVVRRLRDQIGSAEPADDAK AAKPAARKSQTSSKKTSKETTTAKPAPGPKPGPGPKPTPGPRPGSSSGPKPGRSSAARTS ATPRPGLIKSSGASSQQEPPAAKPESKPTPKPGQNVPKPHAPAPKPKPGAPSKSPKPGAR PGPRPGGSAGLPSAARPGPRPGAGRRTGAPRPGNNPFASSQGMGQSRHRSEGGQRSGGSR SGQGERMPRPGGSQGSRGGSGMPRPNPAMMPKHQSSQIGQATTGRGGRGGGRGRGGSRGS GFGGGFGGGPRGPIGGGRGGRGGRGTQGAFGRGGGGRRGRKSRKQRRQEFDEMQAPLVGG VRVRKGNGETVRLRRGASLTDLAEKINAEPAQLVQVLFNLGEMVTATQSVSDDTLEILGG ELNYQIQVVSPEDEDRELLESFDLEFGEDEGDDSDLVARPPVVTVMGHVDHGKTKLLDAL RHTDVVKGEAGGITQAIGAYQVQTEVDDAERAITFIDTPGHEAFTAMRARGAQSTDIAVL VVAADDGVMPQTVEALNHAKAADVPIVVAVNKIDKPEADPDKVRGQLTEYGLVPEEYGGD TMFVNVSARTHEGLDDLLEAIVLTADAALDLRANPDMAAQGVAIEAHLDKGRGPVATALI QRGTLHIGDSIVAGSSYGRVRAMINDQGESVDEAAPATPVQVLGLTSVPGAGDNFLVVDD DRKARQIAEKREARMRAAQQARSSRRKTLDQLFEQLEKGETEELLLILKGDGAGSVEALE DALAKIDVGDEVDLRVIDRGVGAITETNVSLAAASNAVIVGFNVRPTAHAQRMADEENVD IRYYSVIYDAIDEIEAALRGMLKPIYEEKAMGTAEIRQIFRSSKVGTIAGCMITDGTIRR HAKARLVRDGVVVQETEINTLQREKDAVTEVREGYECGLTLTNYSDIHVGDEVQCYEMVE KPRD >gi|302034471|gb|GL383164.1| GENE 132 154831 - 155352 210 173 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|332675921|gb|AEE72737.1| ## NR: gi|332675921|gb|AEE72737.1| hypothetical protein PAZ_c15790 [Propionibacterium acnes 266] # 1 173 1 173 173 322 99.0 7e-87 MYKKSRIVVMFAFAESVFGLCSAAPGLADTIRATPVTSWKSLSVTGGSAKASGKTQGHKK AYMSSDGVWHSQANYIFTVAGHKKTDRGGYGKIDASVFYYTCQPMPGGNCIPKVLRTGAS GSTGRLVGGKAYRWDADAKIRVGRNQRGGWQRSSKICIDLVARRDKCSDGLNW >gi|302034471|gb|GL383164.1| GENE 133 155291 - 155590 131 99 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MWARYPEPSRRLLTGCPSRRSVPALGRLIPVSTASIVVLPAPLGPTRALTPTGKVADTGP SCQPDRYRTTTSSSSIVSELTNSTHRCTYHVEPLGRYKS >gi|302034471|gb|GL383164.1| GENE 134 155442 - 156131 253 229 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 3 193 42 231 318 102 31 2e-20 MSALVGPNGAGKTTMLAVLTGIKRPRAGTLRRDGQPVRRRREGSGYRAHIGYVPQECTWS PSWPVEDFLAFCARMYRVPSTQVRHRCQGVMSDLNVGQFAHQPIGTLSGGQKRRVFLAAA LVHDPEVLILDEPTVGLDPGERISFRRHVVEQAASRVVVLSTHLMDDVALSADQVHLVDG GHITWSGTLPELMAAAGESDSQDHVSVAEQGYLHLMQGRAESELLEGDR >gi|302034471|gb|GL383164.1| GENE 135 156128 - 157300 559 390 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4556 NR:ns ## KEGG: HMPREF0675_4556 # Name: not_defined # Def: putative type IV conjugative transfer system protein TraL # Organism: P.acnes_SK137 # Pathway: not_defined # 1 390 1 390 390 617 100.0 1e-175 MKACLRQAVWSGLGLAVLWVATSVGLMHMYPRVWKSFALTTGSVSVDTVILSPVCCGVGV AYGARLRRAGVTRTSRAWPRSATAAIVTTWLMGVGAVLLLAVGVTTAILALVASGDADPR LVMGSVLTAMAATAFLALGAVLGVAAGSYLLAAVAAIAVYLVAGAVPEAYDLLIGWSGPA AIDGAPSHLTWHAIALWAGLDCAAIVVSLVLVAVITTPGGGPWWRWLTATILVAAVIVDA AATIRLEEVWESTDDWRCREVGKHGSMACVSGDLSWRLEEYATAMGRVDDLLMASGVQRR IVYAPEGGPGKAGYLPVRTHVSTSSTAREWAGDLNAPLLGDNLLGVEDSTSSQCDGTVEI LDDALVSVMDGQPLAPDSLRSMVAQVRACP >gi|302034471|gb|GL383164.1| GENE 136 157297 - 157908 461 203 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4555 NR:ns ## KEGG: HMPREF0675_4555 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 203 1 203 203 335 100.0 7e-91 MTGRLSCFGWFLRSRGLVAVVAYLTVGMVCAHHLGGDLVTVPFAGSRSVDVGLGPSSLSG ILASVLFSSPDPQREQAFPDRPIRTMRVVWAVIVLVWPVAWAVLFNGDQPISQWWVLWFA RNHVLLVGLAMVASVVLSVAWAWLPGTIFVLSCWILGTKDSAATPYWWALLNQSPLAPLS LAVSAALVVVGMVLQWSTPGPPR >gi|302034471|gb|GL383164.1| GENE 137 157989 - 158420 581 143 aa, chain + ## HITS:1 COG:Cgl1938 KEGG:ns NR:ns ## COG: Cgl1938 COG0858 # Protein_GI_number: 19553188 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-binding factor A # Organism: Corynebacterium glutamicum # 5 143 4 146 149 101 44.0 4e-22 MNTPNPRVAKLADQIRVVVAETLERRVKDPRLGFVTITDVRLTGDSRDATLFWTAMGTDK EIAGTEAALESAKGMLRSTVGKRLKLRYAPTLTFVRDATPETAKSIEDALARAAASDAEI ARRSQGAMPAGEADPYRHSDEEE >gi|302034471|gb|GL383164.1| GENE 138 158484 - 159857 1139 457 aa, chain - ## HITS:1 COG:BH1862 KEGG:ns NR:ns ## COG: BH1862 COG0371 # Protein_GI_number: 15614425 # Func_class: C Energy production and conversion # Function: Glycerol dehydrogenase and related enzymes # Organism: Bacillus halodurans # 15 310 25 308 399 157 33.0 4e-38 MSDEIIAAAVAGAGDTDVVEMGRGVLDRAGNVLAEHMCRARGHNLPALVVADERTWAVAG KAVDAGLRSAGVVACDPLVFPAEPCLYASLDNAHTIADRLRTLDAETGSAVVPIAVGSGT INDLTKLAAKDVGRRYAVVGTAASMDGYTGAGAPISDNGAKVTMQCVAPQVVIFDLDITA AAPQVMTASGYGDLAAKIPGGADWIIADAAGIEPLDQHVWALVQSGVRDALSRPDDLRRG DPEAFSGLVEGLILSGLAMQVYDGTRPASGAEHYFSHIWELAHVGADRNPPLSHGHKVAI GTLAMLAFYEKFLDRDLSRLDIDAAVAAWPDWRTVESDIRSTFEGALADHAVKETKVKYV DADGLRARLNRVVDRWHETRAALEKQLVRARVFADQLRRAGAPSRPEDIGLTAADVRATF PKAMYYRSRYTVLDLAREAGWYEELVEEVFAPDGLWT >gi|302034471|gb|GL383164.1| GENE 139 159860 - 160159 88 99 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4552 NR:ns ## KEGG: HMPREF0675_4552 # Name: not_defined # Def: phosphocarrier, HPr family # Organism: P.acnes_SK137 # Pathway: Phosphotransferase system (PTS) [PATH:pak02060] # 1 99 1 99 99 157 100.0 9e-38 MIRTEVTIGHPAGIHARVAAHAVLLASGHSASVFLRSSRGTASLTRLADLLRLDVREDAV VEILADGPDEVEALHEVATFLTSSTNDPAPHTASDEGND >gi|302034471|gb|GL383164.1| GENE 140 160156 - 160524 294 122 aa, chain - ## HITS:1 COG:ECs3560 KEGG:ns NR:ns ## COG: ECs3560 COG3731 # Protein_GI_number: 15832814 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system sorbitol-specific component IIA # Organism: Escherichia coli O157:H7 # 1 121 1 120 123 90 40.0 8e-19 MSVIYRNQICAVGSQAESFLSEKMLVTFGGKAPDELRDFCYALPEATSSGTIGVGDVLAI GEHRFPITAIGALAQRNLDSLGHVTLVFDGADEPRLEGALHVRCGGELPRPQAGSTILIE SA >gi|302034471|gb|GL383164.1| GENE 141 160552 - 161601 1073 349 aa, chain - ## HITS:1 COG:PM1970 KEGG:ns NR:ns ## COG: PM1970 COG3732 # Protein_GI_number: 15603835 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system sorbitol-specific component IIBC # Organism: Pasteurella multocida # 5 347 3 328 329 306 51.0 4e-83 MTEYRSVTVSHGSGGYGGPLTITPTEAKHKLVYIVGGGVRPPVVDRIAELSGAEPVNGFN TSIPDEEMMAVIIDCGGTLRCGIYPRKGIPTINVMPTGKSGPLAQYINESIYVSAVDVDQ VRLADSPTSSATVTSPAIPAAAAPRSKAGTAGTVQGEWSTDKKISEVVAEKKNKTVMDKI GLGAGKVISVFYQAARDAVQAMLTTIIPFMGFVAMLIGIINASGFGTWFTKLLIPLAGNG IGLIVLGLICSLPFLSPLLGPGAVIGQIIGTLIGVEIGKHNIHPSLALPALFAINTQNAC DFIPVGLGLAEAAPETVEVGVPSVLYSRFLNGVPRVAIAWLCSIGLYAS >gi|302034471|gb|GL383164.1| GENE 142 161603 - 162181 512 192 aa, chain - ## HITS:1 COG:PM1971 KEGG:ns NR:ns ## COG: PM1971 COG3730 # Protein_GI_number: 15603836 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system sorbitol-specific component IIC # Organism: Pasteurella multocida # 1 175 2 176 184 224 58.0 6e-59 MHYLVKAAEWFVGLFQEGAKTFVSWMGSIVPLVLMLLIAMNSLIRLIGEDRINRLAQKAG NNPVSRYLLLPFIGSFMLCNPMVHSLGRFLPERYKPSYFASAAQFCHTSNGIFPHINPAE LFIWLGIAQGITKAGLPTGPLAIRYLLVGLVLNFVGGWVTDLTTRYVSRQQKVILPDTMD GKIVHVDTLVEA >gi|302034471|gb|GL383164.1| GENE 143 162265 - 162768 387 167 aa, chain - ## HITS:1 COG:no KEGG:PPA1483 NR:ns ## KEGG: PPA1483 # Name: not_defined # Def: sorbitol operon activator # Organism: P.acnes # Pathway: not_defined # 1 167 2 168 168 300 100.0 2e-80 MFWPVLATVAIIYVCNATLAMRQMRNFSTTYTLLRKRGKVAIGKQKNALSRGAIVMFLLD DRDRVVAGRRMNGITVLARFRDFPVFDGLPLEEIDPAYVRTDRGTRRAIANARDNFLTAR AGEIPVEPPTPLMKVINRVDAKVGHTRERPAADTRHVVRRRGLTAVD >gi|302034471|gb|GL383164.1| GENE 144 162768 - 164690 1311 640 aa, chain - ## HITS:1 COG:BS_licR_1 KEGG:ns NR:ns ## COG: BS_licR_1 COG3711 # Protein_GI_number: 16080911 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Bacillus subtilis # 7 436 12 460 499 102 24.0 2e-21 MDREMWILRQLETSLTASAEALAERLQVSPRTITNAINTLNRMLAPAASVRPTGGRYRLY ILDPQEYSQIRSRLVRATDSLNDPRHRRAQEFGVLLSAKHPVTSDDLADIVCTSRTTVLA DIARLREALKPLGVRIEGRSNQGFSLAAEELDLRLAELTLYPAELVDEYPIDDDIVAVVS RITGQAHLSKPSRHYVRRWLTVLLDRTLTGHPLDAMSEEYQRLRNTPAHRIASKLLTEAE DLVSTTFPIEEELFLAMSVAGMRTPDSAQGRQLFPADEEVPGLVDAIFERIAEIMQIHLD ADELADEFAHHLTFMLNRIRFRVTIDEESVRSIRYQYPVAHRMAEISRDVIEERTGMRIS DSETGLLTGYHQVFLDSHRACPYLRLAIVTATGRVSAHLMRIQLDKVLPHGTKYLMLTGD EADESTLARTDLVVATPDVDITTLAVGDVPVIQLGQVFDPAELISRMSRLNLRGHVDLQL TGANSSLLMSMLSPDRFMAMPAGTDYWSATEALVAYLIDQGLVDESFLATLRARENEATM LLDGLVGFPHATIPGAERIVLAMATIPRRPEQPGARVVFLMGVPDKADYDDTILVTVYDE IIRLTNDPDLLNRLSQLTSYEDVFWLMASRPCNPVCPEER >gi|302034471|gb|GL383164.1| GENE 145 164433 - 165071 136 212 aa, chain + ## HITS:1 COG:no KEGG:PPA1481 NR:ns ## KEGG: PPA1481 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 126 212 1 87 87 165 98.0 1e-39 MTWVVEGVRGADQTTADLAVFLWVENVEAVTAAGGTYGRRRGQHPVERVDGVGDGTGADL QTFCQRFGGGCQRCLQLPEDPHFSVHEITSLCSTSLVGMKLTPHLRPGLAALCVLLSDFW KGGGAMSRSIRLRYTLAYRSSGRGGPTTLIPVLILPVRRCSMPVVIDFFEVGWSSRRTIE AVRLSIVIRPRIVHYDARFRLFFLGILITLHL >gi|302034471|gb|GL383164.1| GENE 146 165795 - 166121 406 108 aa, chain + ## HITS:1 COG:MTH1452 KEGG:ns NR:ns ## COG: MTH1452 COG1917 # Protein_GI_number: 15679449 # Func_class: S Function unknown # Function: Uncharacterized conserved protein, contains double-stranded beta-helix domain # Organism: Methanothermobacter thermautotrophicus # 17 106 8 97 99 67 41.0 9e-12 MTETNNLGFIENLAAQIDYSDGSTVSKTVMRAEGVNIVLFSFAAGEELSEHTAAMPVIVE ALEGQLEITAEGRTVTLNPGGIVHFTTRLPHAVRAVEASKMALYMITA >gi|302034471|gb|GL383164.1| GENE 147 166174 - 167061 707 295 aa, chain + ## HITS:1 COG:Cgl1933 KEGG:ns NR:ns ## COG: Cgl1933 COG0130 # Protein_GI_number: 19553183 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridine synthase # Organism: Corynebacterium glutamicum # 5 277 7 278 297 233 49.0 3e-61 MNTLQSGVLVVDKPAGVTSHQVVGRVRRLMGTRKVGHAGTLDPMASGVLVVGVNRATRLL GHLSLHDKDYTATVRLGVGTVTDDAEGDVTVTTDASAIDDRAIHAAMVRQTGEIQQVPAA VSAIKVNGRRAYAKVRAGEDVVLRPRAVTVSRFEAIAIRRHGQVIDVDVEATCSSGTYVR ALARDVGADLGVGGHLTALRRTRVGPFDLTAACVDIFAQDAVTPTPMTMAEAAALSFPVV HVTADQAAAIRVGRRLSFTVPAEVTAIIAETGELLALYRPDDEKDGQSRAICVLV >gi|302034471|gb|GL383164.1| GENE 148 167215 - 167517 106 100 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|314962063|gb|EFT06164.1| ## NR: gi|314962063|gb|EFT06164.1| hypothetical protein HMPREF9614_00186 [Propionibacterium acnes HL002PA2] hypothetical protein HMPREF9618_01166 [Propionibacterium acnes HL082PA1] hypothetical protein HMPREF9595_01933 [Propionibacterium acnes HL005PA2] hypothetical protein HMPREF9569_01292 [Propionibacterium acnes HL078PA1] hypothetical protein HMPREF9615_00488 [Propionibacterium acnes HL002PA3] hypothetical protein HMPREF9579_01205 [Propionibacterium acnes HL087PA1] # 49 100 1 52 52 103 100.0 3e-21 MTAAVPREASSSRDSPALSLSITCRSFLPKTLYRWDARTKSTSYGTFRMDDLEITQATQN ATASRHGDIDHRNGGPTSAQINHLMVSRYIYVCKFEYSYS >gi|302034471|gb|GL383164.1| GENE 149 167393 - 168700 1083 435 aa, chain + ## HITS:1 COG:BS_opuAA KEGG:ns NR:ns ## COG: BS_opuAA COG4175 # Protein_GI_number: 16077367 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport system, ATPase component # Organism: Bacillus subtilis # 4 390 10 394 418 332 47.0 7e-91 MDLVRASHLYKVFGKNERQVIERLKAGESREELASLGTAAVIDVSFEVAKGETFVVMGLS GSGKSTLIRMINGLWSPSEGTVEVAGKVVSDMNDAQLRALRRDHVSMVFQHFALLPHLTV RENAAYGLKLQGKLKQKERLEKANEWLNTVGLNGWGDKYPHQLSGGMQQRVGLARALAAE TDILLMDEAFSALDPLIRREMQDQLLELQGALSKTIIFITHDLNEAMYLGDHIAVMRNGR VAQIGTSDEILTQPADDYVADFVQDVDRSRVLTASAVMRPTEAVVSRSAEPRRVQRILDQ REWAGVFVVDEHRRLLGTVGDQEVIEAARRGDRSIADAVETSGILTARTDTPLSELFAPT SNARVPLAVVDEDFHLMGVISRVTLLDAMSRARDEAGEGSVMSLENTGKLPIIRDTGNPV GLPPADQIATIEKEA >gi|302034471|gb|GL383164.1| GENE 150 168706 - 169572 988 288 aa, chain + ## HITS:1 COG:RSp0067 KEGG:ns NR:ns ## COG: RSp0067 COG4176 # Protein_GI_number: 17548288 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport system, permease component # Organism: Ralstonia solanacearum # 10 272 5 267 298 225 46.0 8e-59 MGFNFANPRIPLGSWIETFFDWFQNAFDWLITFTNVVIGGMYHGLNLVLSKPLYLVMMVV FAAIGWSCANWRVGLFALIGFYLVRSMDQWNNTMQTLALVVVAVILALILAIPLGIWAAK SKRFSAIIKPILDFMQTMPSLAYLVPVIVLFGIGQVPGAIATIIFALPPGVRFTELGIRG VDTETVEAGAAFGASPRHILWRIQMPLAMPTVMAGVNQVIMLALSMVVLSGMVGAGGLGG DVVAALSQVDIGLGMEAGLAVVIVAVYLDRITNGLANRTPLARAQRAS >gi|302034471|gb|GL383164.1| GENE 151 169615 - 170622 1070 335 aa, chain + ## HITS:1 COG:BMEII0550 KEGG:ns NR:ns ## COG: BMEII0550 COG2113 # Protein_GI_number: 17988895 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport systems, periplasmic components # Organism: Brucella melitensis # 64 322 24 279 287 142 37.0 8e-34 MVQRKVIAVASALTVGALALSGCGATNSGNGESGGSDVGSDNVNTKWADCTPGHGSKDTT SMKADGKKDITIGAFNGWDESFATAGIMKNVLEKDGYKVTIKGFDAGPGYAGLVAGDIDL LTDGWLPVTHADYVKRYGDKMENLGCWYDNAKLTIAVNKDSKARTIGDLKTMGDEYDNTL YGIEAGAGLTKATKDSAIPKYGLKNLNFKISSTPAMLAQLKKSTSAGQDIAVTLWRPHWA YGAFPVRDLKDPKKAMGNAEVIYSFGRPGFEQDFPKVAQLVRNMAFDDNKLSDLEDTMFS ADKYGGKNQEKAVEEWISRNNDWVDKLKTGQLAEK >gi|302034471|gb|GL383164.1| GENE 152 170624 - 170830 136 68 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MHTIEVSDDYSRRFLGNRHVEQSMVRIRLNPNPTERASLTQSVKGSDSQETEYRGRQRAA TRAARIDV >gi|302034471|gb|GL383164.1| GENE 153 170774 - 171670 359 298 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 [Bacillus selenitireducens MLS10] # 10 298 20 313 317 142 31 1e-32 MSVPEESSTVVIGNFDGVHRGHQALVQEAKRLDPDGYVVVVTFWPHPLTVVAPDQAPALL CSLERRIEWLKDAGASEVRVVNFTTEIASWAPAAFVERVLGPLQPRHVLVGQNFRFGRHA VGTPDALAEHGCFQVHAMDLVAISGVTVSSTRVREVVAAGKVTEAAELLGRPFEVGGVVV MGDQRGRELGFPTANLVVPQDRAVPADGVYAGWLEPTSGPDAGRRLPSAISVGTNPTFDG VERRVETYVIDRDDLELYGVDITVTFAERLRGQIKFDGIEPLISQMADDVETAKRVLS >gi|302034471|gb|GL383164.1| GENE 154 171910 - 172173 446 87 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50842951|ref|YP_056178.1| 30S ribosomal protein S15 [Propionibacterium acnes KPA171202] # 1 87 1 87 87 176 100 8e-43 MDAAEKKKIIEEYATHPGDTGSPDVQVAILTKRIAELTEHLKVHKGDHHSRRGLMLMVGQ RRRLLNYIAKNDIEHYRELIARLGLRR >gi|302034471|gb|GL383164.1| GENE 155 172179 - 172361 58 60 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|314976668|gb|EFT20763.1| ## NR: gi|314976668|gb|EFT20763.1| hypothetical protein HMPREF9566_01379 [Propionibacterium acnes HL045PA1] hypothetical protein HMPREF9596_00087 [Propionibacterium acnes HL005PA3] hypothetical protein HMPREF9583_02535 [Propionibacterium acnes HL038PA1] hypothetical protein HMPREF9571_02292 [Propionibacterium acnes HL043PA2] NAD(P)H oxidoreductase [Propionibacterium acnes HL099PA1] # 1 60 1 60 60 90 98.0 3e-17 MGRQSTVTVILSVVMSLRHQRPIPRIAAMHAVTIAGSDETRASCEHSERGARRDTPSHMI >gi|302034471|gb|GL383164.1| GENE 156 172494 - 174695 2504 733 aa, chain + ## HITS:1 COG:MT2853 KEGG:ns NR:ns ## COG: MT2853 COG1185 # Protein_GI_number: 15842321 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) # Organism: Mycobacterium tuberculosis CDC1551 # 9 729 13 739 752 928 67.0 0 MEGPGLEFTEAIIDNGKLGKHVVRFEAGLLAQQADGSAAVYLDGDTMLLSATTAAKTPRD SIDFFPLTVDVEERMYAAGRIPGSFFRREGRPSEGAILACRLIDRPLRPSFVKGLRNEVQ VVVTVMALNPAVYYDVVAINAASMSTQLAGLPFSGPIGGVRMALIDDQWVCFPSVDQRKE STFDMVVAGRVLADGDVAIMMVEAESTPATWGLVRGGRTAPTEEVVATGLEAAKPFIKVL CDAQVALAAKLPKETYDFPVFKDYEDDVYAAVEEKAADELSRIEQIAAKLERQEAESELK ARIKAELAETFPEREAEISGAFKAVMKKIVRKRVLDEGVRIDGRGPRDIRSLSAEVGIIP RVHGSALFQRGETQILGVSTLNMLDMEQKLDTLSPENTRRYMHNYNMPPYSTGETGRVGS PKRREIGHGNLAERALIPVLPTREEFPYAIREVSEAIGSNGSTSMGSVCASTLALLNAGV PLRASVAGIAMGLMSETDEDGKTKYLALTDILGAEDALGDMDFKVAGTSEFVTALQLDTK LDGIPADVLAGALKQAKEARTAILEVMNEAIDSPDEMAPTAPRIITVHIPVDKIGEVIGP KGKMINQIQDDTGANISIEDDGTIFIGADNGDSAESARSMINAIANPQMPEVGERYLGTV VKTTSFGAFVSLLPGKDGLLHISKMRDLNDGKRVEAVEDVLSVGQKIQVEIAEVDDRGKL SLVLASDEDDADE >gi|302034471|gb|GL383164.1| GENE 157 174863 - 175603 715 246 aa, chain + ## HITS:1 COG:Cgl1927 KEGG:ns NR:ns ## COG: Cgl1927 COG0289 # Protein_GI_number: 19553177 # Func_class: E Amino acid transport and metabolism # Function: Dihydrodipicolinate reductase # Organism: Corynebacterium glutamicum # 2 245 3 248 248 264 58.0 1e-70 MIKVAVFGAKGRMGTAVCQAVEEAEDTELVAAVDSGGDRSDASGADVIVDFTTPDAVMDN LSWAISHDINTVVGTTGFDDERYQVLRDQLADHPNIGCLVAPNFSIGAVLMMHFAEQAAR FYESAEIVELHHPNKVDAPSGTARTTATKIAAARQEAGLGEVPDATKSQLNGARGAVVEG VHVHSVRLRGLVAHQEVLFGAEGETLTIRHDSMDRVSFMSGVLTGVRGVLDRPGLTVGIE GLLGLE >gi|302034471|gb|GL383164.1| GENE 158 175680 - 176435 382 251 aa, chain + ## HITS:1 COG:no KEGG:PPA1469 NR:ns ## KEGG: PPA1469 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 251 29 279 279 438 99.0 1e-121 MVTVDRDRRRHRFIKWLIAIVVVALLAIAAMIVDQTFRARAEKDIATTIATSVGADASTI GVTIHNRPFLKALVTDELQGLDATIPKATVARDDTTVTFHDVDVHANGIRHVREKSQTVA ETMSASGRVDWSELSRLAGAKITYNDDAGETGRVTIVREMSVLGARVDVSITAVPGVEAT SRRVTLSSPSASLDDIPIPDVLLKPILKGITSRFTLPNLGNLHYESLKATPQGLDFSLVG TEVKLSDLTGR >gi|302034471|gb|GL383164.1| GENE 159 176543 - 178282 1445 579 aa, chain + ## HITS:1 COG:Cgl2559 KEGG:ns NR:ns ## COG: Cgl2559 COG0028 # Protein_GI_number: 19553809 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Corynebacterium glutamicum # 4 577 6 577 579 594 54.0 1e-169 MNVAEQLVQQLLDAGVRRIYGIVGDSLNPVVDAVRKTGGSVKGGIDWVHVRHEEAAAFAA AAEATLTGELAVCAGSCGPGNLHLINGLFDAYRSQVPVLAIASHVPSVQIGMSYFQETHP DRLFVECSDYCELVSTPEQAPRVMNSAIRHAVAGSTVSVITLPGDISDKKAAAPSPVFIP SRRPTIEPNPEDVRQLVKLLNDVRKVAIFAGAGVEGAHDEVLALADKLKAPIGHSLRGKD FIQYDNPFDVGMTGLLGYGAAAEGMNDADVLILLGTDFPYNQFLPDTLTVQVENRPEKLG RRTDVSFPIHADVKALCDAVTPLLKQHDDKFLKAAVKRHAKIMKAPVGSYTRNVEHMKPI HPEYVAHVLNEVADRDAIFTADTGMCNVWTARYIDPLGTRRLIGSFLHGSMANALPHAIG AQASHPGRQVISVSGDGGLSMLLGELVTARMLNLPIKVVAFNNSTLGMVKLEMLVNGLPD FGTDVHDVDYAGLAKAIGFHAERVDDPRNIRRALTDAMDFDGPALVEVITDPNALSLPPE IKGEQMIGFATAMSKIVLNRGAGEAVSMATSNMRNIPRF >gi|302034471|gb|GL383164.1| GENE 160 178334 - 178528 120 64 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313801400|gb|EFS42651.1| ## NR: gi|313801400|gb|EFS42651.1| hypothetical protein HMPREF9576_02285 [Propionibacterium acnes HL110PA2] hypothetical protein HMPREF9589_00472 [Propionibacterium acnes HL059PA1] hypothetical protein HMPREF9608_02079 [Propionibacterium acnes HL067PA1] hypothetical protein HMPREF9614_00176 [Propionibacterium acnes HL002PA2] hypothetical protein HMPREF9569_01302 [Propionibacterium acnes HL078PA1] hypothetical protein HMPREF9592_00505 [Propionibacterium acnes HL046PA1] hypothetical protein HMPREF9568_01029 [Propionibacterium acnes HL013PA2] hypothetical protein HMPREF9581_01186 [Propionibacterium acnes HL087PA3] # 1 64 1 64 64 110 100.0 5e-23 MSSQTNRAGRLVLTTQQSVIPGTIADNIESLLDDEGNESSHDGKGARSHTCDSAGPIRLP DHVP >gi|302034471|gb|GL383164.1| GENE 161 178739 - 180412 1481 557 aa, chain + ## HITS:1 COG:ML1512 KEGG:ns NR:ns ## COG: ML1512 COG0595 # Protein_GI_number: 15827796 # Func_class: R General function prediction only # Function: Predicted hydrolase of the metallo-beta-lactamase superfamily # Organism: Mycobacterium leprae # 3 557 8 558 558 526 50.0 1e-149 MTPPDLQPDVLRIIPLGGLGDVGRNMSCYEINGEMLVIDCGVLFPEDDHPGVDLLLPGLD YLDEEKLAKVKALVLTHGHEDHIGAVPYLLKRRPDIPIYGSKLTLALVEAKLREHRIKGY KLNVVHEGDVAEVGEQFDLEFIAVNHSIPDALAVCVRTDAGTLINTGDFKMDQLPLDGRI TDLRAFARLGEEGVDLFMVDSTNAEVPGFVKSETEIEPAIERVFEKAKKKLIVACFASHV HRVQQVLNMAVRHHRKVCYVGRSMVRNMAVAQDLGYLDVPENTVIELRDLDHYRDNEVVI ISTGSQGEPLSALARIANREHRDIEVGEGDTVLLASSLIPGNENAVYRVINGLTKLGAAV VHKGNALVHVSGHAAAGELLYAYNIVRPRAVMPIHGEVRHLVANADLAKATGVDENNVVL VEDGGVIDLVDGVPRVVGKVDASYILVDGSGVGELTEDTLTDRRILGEEGFLSVVTVVDT RSASVVSRPAIQARGFAEGDSVFAEITDQIVTELEKAMAGGMDDTHRLQQVVRRTIGRWV SRSLRRRPMIVPVVVKI >gi|302034471|gb|GL383164.1| GENE 162 180554 - 180739 334 61 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|213961153|ref|ZP_03389432.1| ribosomal protein L28 [Propionibacterium acnes SK137] # 1 61 1 61 61 133 98 8e-30 MAAVCDICAKRPGFGHNVPWSKKKTNRRWSPNIQRVRVVENGTHKRMNVCTSCLKAGRVS R >gi|302034471|gb|GL383164.1| GENE 163 180789 - 183038 1381 749 aa, chain + ## HITS:1 COG:MT3051 KEGG:ns NR:ns ## COG: MT3051 COG1200 # Protein_GI_number: 15842526 # Func_class: L Replication, recombination and repair; K Transcription # Function: RecG-like helicase # Organism: Mycobacterium tuberculosis CDC1551 # 26 730 8 718 737 518 44.0 1e-146 MGRYGDDVNAVTRWRTRTQKELHRPLAEAVGAKTAKAFSALHVGTVGEALGHLPRRYLTG TETTDLSHLVIDTEVALVADVVGVEVHTNKTVTGRERRPRQRLEVMLSDGKARLPVTFFG KPHIVSYWQRIFSAHTHGIFVGKVGEFRGNPQLVHPDFVMIDRNGKVVAGREEGKVMAAQ VQRHGLLGLYPQTSKLRTWEIASVESMLLESTPELEDTLPEWLRQEADLPSLWEAYHAIH YPHSVAEADRGAERLIWEEAIATQVTMAVRRRSAERHDAPVCSRRDGGLLVAFEDRLPFT PTVGQDEVSRVIDADLSADRPMHRLLQGEVGSGKTFVALRAMLQVVDAGHQAVLLAPTEV LAQQHYRTIINMLGDLASGEGLDAPEISTGVALLTGSMKAAGTRAALADIASGAAGIIVG THSLLSGRVIYNDIGLVVVDEQHRFGVEQRSVLTTGEGARPHELVLTATPIPRTVAMTVF GDLEVSSLRELPTGRADVQTTVVDLPAHGSWLTRAWRRIREECDAGHQVFVVCPRINSDD ADDVEGGRPPAAAVEELAPQLATGPLAGLRVEALHSRLDSSEKDLVMDRFIKGESQVLIS TTVIEVGVDVPNATMMVIMDADRFGVSQLHQLRGRIGRGNLPGLCLLVTTAPPGSVARER LDAVAASRDGFELAELDLAQRHEGNVLGSSQAGYSSPLRLLRVLDHAEIVTASKDLAERW VAEAPGDPRLLDVVTATEMLAEGNLMEQG >gi|302034471|gb|GL383164.1| GENE 164 183143 - 183565 487 140 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4531 NR:ns ## KEGG: HMPREF0675_4531 # Name: not_defined # Def: pyridoxamine 5'-phosphate oxidase family protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 140 1 140 140 274 100.0 7e-73 MINEENPITEVPEDSCWGYLDTAEVGRLATSVNDQPEVFPVNYVVDGQSIVFRTAAGSKL EDIVTNNRVAFEADGWTEEAGWSVVLRGKAEIITDDAELALCDKMPLLPWVPTVKRNYVR VEADQITGRTFAFGPEPKGN >gi|302034471|gb|GL383164.1| GENE 165 183702 - 184310 212 202 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764797|ref|ZP_02171850.1| ribosomal protein L29 [Bacillus selenitireducens MLS10] # 3 184 14 189 199 86 31 1e-15 MSRIIAGRAGGQRLTTPPGRLTRPTTDRVREAVFSALAAWNGTANEVPEVQLAGQAFCDL FAGSGAVALEAASRGATTVVAVDRDRCACNVMKDNSRTTRLRIEVSSQTVTAFLAQNHRV FDVVWFDPPYDLAADDMDSLILTACDGALAHNGLLVVERSRRSRDPRFPDGYESWNSRYG ETVVYYAQRTGEPEVDTGREQQ >gi|302034471|gb|GL383164.1| GENE 166 184307 - 184780 321 157 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 [Bacillus selenitireducens MLS10] # 4 155 7 159 164 128 42 3e-28 MKAVFSGSFDPITLGHVDIVARAAELVDEVVVGVAMNSAKNGIFSMDERVAFVKDAVADI PGVEVALVDGLLVDFCTEMGADAIIRGLRFGGDFDYELQMAHLNKAMSGIETILLPAGRE FGTISSSMIRSAACNGGNVSEFVPEMVNAALHERFPH >gi|302034471|gb|GL383164.1| GENE 167 184784 - 185041 153 85 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|314919257|gb|EFS83088.1| ## NR: gi|314919257|gb|EFS83088.1| hypothetical protein HMPREF9598_00087 [Propionibacterium acnes HL050PA1] # 1 85 1 85 85 173 100.0 5e-42 MLENPAHAIPLWGLWQNYHRPNCSTLDGFSESVGDIGCRSLGNRIAGEDSARQGEGYPLG NMINACAHEVYLGQCLVRPGIVEIG >gi|302034471|gb|GL383164.1| GENE 168 185124 - 185960 510 278 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4526 NR:ns ## KEGG: HMPREF0675_4526 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 278 1 278 278 545 98.0 1e-154 MPTDHRIVAYHQTHGHGDTFVDLSPLGASAPLTHLIVAALHIADDGTVILNDHPVDDDYH TQLWDQLDAVRSRGVRVLAMVGGWAPGTMCKLDGESLSIYYPGLRDFLTQRHFDGIDIDV EQEMSLPGVCTLIERFRLDFDEDFEIVLAPVASALHGGANLSGFDYQELHQLRGDDIDFY NAQFYSGFGSLASPDDYVSIVEHSIIPVNKIVTGMAGSPDAAQGFVDIATVSDTISTLCQ RYPNFGGVDVWEYPLALPGAPDHPDQWVHVMHHAMSHR >gi|302034471|gb|GL383164.1| GENE 169 186036 - 187751 1781 571 aa, chain - ## HITS:1 COG:TM1226 KEGG:ns NR:ns ## COG: TM1226 COG0747 # Protein_GI_number: 15643982 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Thermotoga maritima # 68 528 40 513 562 114 26.0 8e-25 MDPKPLSFPISRRSLLFTAGSIALTIPLLSACGSGDTDAKGSRSKKGTIAKDGVLTIGAA VSTSNVFPHNFNVFGGGDSAPGNAMFWETLFRISSKDGMKLVPNLAKEVKYTSGGKVATY KLRDDVTWNDGKPFTSKDVAFTYGFIFGPPGQSTEKDFKWLAKPIETPDKHTVVVTYNEP QYTEDIPLSLYFPIYPEHIYSKVDHQNYVDKNPVGTGPGKLKSFAGQLIEIDIRDDYWGK KPKGVKTIKLVPAGTAGNIQSQITQGKVDWAEGGDPGVITSFLPMDKDHNGYNYYADGST RGIILSTHSLPTSDVAVRKALRASVDMGVVAKAGGVGYTVPSVTGLDPVIYANMLKPEFK KPMAPDVEAAKKFLKDAGWTVQNGNLCKDGKEYPLQLTIRNDNPVEMATMPIVVSQWKDN LGINVKFTPLPKEVFDPAQAMGEYDMSLWTTNAAGGAFNAYTMYMQTKNYKLGDKKADGN YGRWKCSKEADEAIANLPKVPQDDIKEITRRCQILQQAVYDDAPYIPVQNSGTGGMYTTK KWSGLKKAEDVDYFPRASGYNNMIHTVNDFD >gi|302034471|gb|GL383164.1| GENE 170 187843 - 188874 510 343 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 34 331 35 324 329 201 37 3e-50 MTGAHVDDRTAVLEARNVSLDFDGTDSSGSKVTIHALDRVNLTIHRGEITALVGESGSGK TSIARLFALIYKPTSGELYRNGELVHVHGKRAERAYYRDVQLIYQDPFASLNGLKKISTI LGRVFKIHYPKMRRKEIAQRIDDVLTKVNMTPPSRYLNRYPTDLSGGQRQRIAIARALAV SPQVLLADEPTSMLDASIRLDVLNLLSDLRETEGVSVLYITHDIASARYICDRINVMYGG RIVEAGPTKQIISDTIHPYTRLLLSAAPDPARYKGSANSTAIDIPEGAPMNNSVRVKGCR FAPLCPLAQPRCTEEELPKFHSEDGTREVTCWEAEERREFHRV >gi|302034471|gb|GL383164.1| GENE 171 188871 - 189962 912 363 aa, chain - ## HITS:1 COG:VC0617 KEGG:ns NR:ns ## COG: VC0617 COG0444 # Protein_GI_number: 15640637 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component # Organism: Vibrio cholerae # 21 338 5 317 327 296 45.0 4e-80 MTAQSSSTQARHGMTTDNEVLLEVKGLCVDYVTESGNIRACDNVNFLLRRGEILGVAGES ACGKSTLLNALGRLQRMPAATSAGQILFHDRNGSVTDLATLSEADLKPYRWTKIAVVMQS AMACLNPILKLSEQFIDVQRAHDPSLAEKDALTKSAELLEAVGISADRLSSFPFQLSGGM QQRALIALSLVCEPDLVLMDEPTTAVDVVMQRQILQEVLAAQKRLGFSIVFVTHDLSLLM EISDKIAIMYAGRIVEVGTPARFHSSARHPYTRGLRLAFPPLSEPLCRLEGIKGSPPDLL DLSTGCAFAPRCEFAMPICHQRIPELRTIDEGASACYLSNGELSDQELADQQKQATNHEE AIA >gi|302034471|gb|GL383164.1| GENE 172 189959 - 190891 951 310 aa, chain - ## HITS:1 COG:VC0618 KEGG:ns NR:ns ## COG: VC0618 COG1173 # Protein_GI_number: 15640638 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Vibrio cholerae # 57 309 84 335 341 170 36.0 2e-42 MVKRFLGVGKVQVGLAIMLFFILVAILGQPFCTHVLHTSPYQVDYMTLGGTAPGGKHWLG TTSAGQDVLAWMLYGTRNSVVVGLASAVIGTVLTVVIGTWAGFSGGWIDRFLNGFILVFA NIPTFAILFMIAGIMQNAGWLLVSLVIGCFEWSGGARQIRAQAMSLRGRDFTTALRTIGE SQSHIVLSEVMPHLLGLISPMFLRLIAAGVNMQASLAFLGIGDPSMPSWGLMINWAMTQN ALFRGLWWWFIPPGLALALIGFATTMINFGLDEVTNPTLSTKRMKLMRKFEKAKKLAAAK HPTHAEETAA >gi|302034471|gb|GL383164.1| GENE 173 190894 - 191091 166 65 aa, chain - ## HITS:1 COG:VC0619 KEGG:ns NR:ns ## COG: VC0619 COG0601 # Protein_GI_number: 15640639 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Vibrio cholerae # 5 63 267 325 328 57 45.0 6e-09 MTAVILAEAVFIYPGIGSLLSGAQGHRDYPVMQGIMLMIIFMSLLFNFIADSVYVILDPR TREEA >gi|302034471|gb|GL383164.1| GENE 174 191141 - 192019 586 292 aa, chain - ## HITS:1 COG:Ta1328 KEGG:ns NR:ns ## COG: Ta1328 COG0601 # Protein_GI_number: 16082316 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Thermoplasma acidophilum # 46 268 13 234 340 141 32.0 2e-33 MTSPGHPEPTAQELPTTADPAVDPSHAQPQTSGRSRRPHRRGGGAFLLKRLGTYLIVAVV SVLLNFILPRFMPGDPATQLIKDIVAKTGAPPSGYQMRLIKARYGDPDRSVLLQFWDYLV QLVHGDLGKSIEYYPVNVTTLINQALPWTLYLAIASTILGWIVGTWLGVRLGWKPGRKLD SIVTPLSMFFSSIPAFWLGLLIVWYFAYKNGWFPNQGAYDNELTMSLTNGHFIASVLMHS VLPFFTLVIVGFAGWLFSMRNMMITTVNDGLCPARPRQGSVVLAHSQSLRRA >gi|302034471|gb|GL383164.1| GENE 175 192176 - 193744 902 522 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4518 NR:ns ## KEGG: HMPREF0675_4518 # Name: not_defined # Def: glycosyl hydrolase family 20, catalytic domain protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 522 1 522 522 1026 99.0 0 MTTMSAGTSWFPVNAARYDDSFRGFMLDVSRDRVPTRSTLDFLTRVMARCGLNHLELYGE AGFAYRGEEEVWADRSPVTAEDMRWLDGLCRGRGIELGANQNCLGHMEPWLETESHHHRC ENPDGVDLPWGVHARASTLAPVPENLDFVQRLLGELTETVSSKFLNVGLDEPWELGTGVS ADRCRDEGKGVVYAKWARDVVTPWLDRGWRVAMWADIVNSHPEALDIIPDEVLLIPWTYE SPAMEAKFAGTEGYEIRSDAGFASTARLVANAGRPFVNAPGTGAWNTFTGRLSNAVGNIV DAVITDHSLGGKGVLLTGWGDSGHHAGLVFSLVPLVVTGVAIADPDHAEGLNSAKSLVNA VSQALFDVDDHPGAHLLVGAGLLEDKLGVIRRNHSLPARCLLEGDPGDDLGADGIAATRA EIARLHDRANETEAALGGGPIGWVEDVRIGLDLVCHSLDVLTGGELTVSPALLDRFATAW LRTSRPRGLARSMARLPGGADYEEVAAKPVSGLEHWRGLLGL >gi|302034471|gb|GL383164.1| GENE 176 193704 - 194930 504 408 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4517 NR:ns ## KEGG: HMPREF0675_4517 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 408 1 408 408 793 100.0 0 MKIGANYTPSQGWFHSWLDLDIDATRRDFEGIAQLGLDHVRLFPLWPLLQPNRGLVRPRA LDDVVSVVRAAGEFDLEVTVDALNGHLSSYDFLPSWVITWHTSNLFTDPLVKAGQTDLIS QLATRLREEPNATGMTVGNEFPQYAALAPGHHHPTRSECTVDDAQTWLETMLGTMRDQWP DGRFWFGFDDDLWFVDDHPFTPRHAVTQGSATTVHSWVFAQVGPRFGEGHPALTWFPRYL LELARAWSHDPERPLWLQEVGAPRTHVPDSSSAAFMTTTMASLTSTPGLEAITWWCSHDV SRDLLDFPELEYSLGLFTNDGKPKPEALALSDMLPDLHNAQPQHQLDEPLEFSANWDTGA GRSVCSPMGDLFAQWVDQAEQTGRAPRLALRPTPGLTDREALASARAH >gi|302034471|gb|GL383164.1| GENE 177 194927 - 198010 1967 1027 aa, chain - ## HITS:1 COG:SPAC513.05 KEGG:ns NR:ns ## COG: SPAC513.05 COG0383 # Protein_GI_number: 19114891 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-mannosidase # Organism: Schizosaccharomyces pombe # 74 1023 94 1075 1077 436 30.0 1e-122 MHDHAPILDDRVHRHLAEKIRPAETTTVCHLNVEWAPVTDTVEGLNSRPGVVGQGEPISI SAGLALAYEPFRIGDTWGPPWGTTWFHLTATVPPKHRDDHLEMIVDLGGVWDSPGFQSEG LVVRPDGSIIKALNPRNTWIPVETDTEGHIDVYVEAASNPILLAQPPFQPTEDGDKLTAS TDTYYSLKRADLVVVNDEVRELIADIVTLSGLAAQLPEDSERRWDVRRALDRAMDRLDLF DVVSSASAARSELAPALTRPAHDSAQTMTAIGHAHIDSAWLWPLRETRRKVARTISNQLN LIDTDPAHIFAFPAAQHSAWLEEDHPDLFARLQKAVKDGRIIPVGGMWVESDANLPGGES MCRQLLYGQRYFMAKFGHHCPEVWLPDSFGYSGALPQLAKLAGAHWFLTQKISWNQVDKF PHHSFWWEGIDGTRIFTHFPPADTYGSDLSAHDLEHARANFQDKGRSNSSLVPFGYGDGG GGPTREMLAQARRVADLDGSPKLAIEPPATFFSRAESEHEDPGTWVGELYLELHRGTFTS QYEVKKGNRRNEHLLRDAELWCATAAVRELMDYPGERLAEIWRTICLYQFHDILPGSAIA WVYREVVADHRRISDELTELIHHAQELLAGEGDEEIVFDSAPMARPWASTVAMGGSKAPS ITEGVHAEENEEDFIVDNGLLRMTVDAHGLITYLVDTASGRDAIPAGQRGNLLQIHPDFP NMWDAWDIDPFYANTVTDLDDGQATMSRKDGSVTISVTRTFGHSSATQSLTVNPGDPRVK VHTHVDWHEQDSLLKLAWPVDVHTDHADYEIEMGHITRPTHTNTSWDAFRLEVNAHRWVY VSEPGFGVAIANSGTYGWNVSRHPKDNGGTWSVARASLLKGARFPDPRADEGEHDFFHTL HVGADLADAIRDGYAANLCVRRRQGSPVEPLVSVEGVAVEAVKLAEDGSGDVIVRLYEPY GRHVHTTMTLGFEATSAVEVDLLEDPLDGNPHAQVAPSVVTADLADGTIGLSMRPFQVAT LRLGRNR >gi|302034471|gb|GL383164.1| GENE 178 198363 - 198569 80 68 aa, chain + ## HITS:1 COG:no KEGG:PPA1458 NR:ns ## KEGG: PPA1458 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 33 68 35 70 70 69 91.0 5e-11 MTRRLVRLIVLMTWCAIRSATTWLGRTSKARLGHDISQHRELVTDMELARPIRQGAEAFY LSLQIALK >gi|302034471|gb|GL383164.1| GENE 179 198659 - 199669 672 336 aa, chain + ## HITS:1 COG:BH3692 KEGG:ns NR:ns ## COG: BH3692 COG1609 # Protein_GI_number: 15616254 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus halodurans # 4 335 2 336 337 141 29.0 2e-33 MDRTTIKDIARVAGVSPGAVSFALNDKPGVSDSTRARVKAVAKDLGWRPNVAARALSANR AGAVGLVIARDDRSFAGEGFFLHLIAGMEEILTPARTALVLQLVASREEECEVHRQWWAQ RRVDGVVLVDPARNDPRWPLMADIKMPCTVVGAMSDTPLPGVHIDDAAAAGNIVTHLINQ GHRRIAHIGGDPTLEHSMVRRRAFAQEAERLGAVVIEAAATDYSEQSGLRETSALLKIGD RPTAIVYDNEVLTLGGLAAVAEHRLQVPTDISVVSFEDSPACRVMSPGITALRRDPSVLG RDAITMLMGILGGDDVEDVTEQPPELIVRGSTGQAQ >gi|302034471|gb|GL383164.1| GENE 180 199690 - 200586 624 298 aa, chain - ## HITS:1 COG:all4824 KEGG:ns NR:ns ## COG: all4824 COG0395 # Protein_GI_number: 17232316 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Nostoc sp. PCC 7120 # 35 298 16 279 279 172 35.0 6e-43 MSTAQATRPAKQKPWRSRHAFDPTRPTLAGLIGRYLLLIFVVIISIGPFLWQLSTSLKSV NENIYSFPPHLIPQEFTIDAYRRVAHVVPILRYAWHSVIVAAVCVVGNVVLASLAGYALT CMKFRGKKVVMGILLSVLLLPGEVTLTSQYLVIKGMGLANTLTGVAIPGVVGAINVLLMA TACRAVPPSVLDAATVDGANTWSKIRHIVWPNIKGMASVVAVFSFIGAWDDFLWPLVVLN DPDKYTLTVGMQYLSSTMSTDPREVAAGTVIALIPIIIIFASMQKVFFRGVESGGVKG >gi|302034471|gb|GL383164.1| GENE 181 200583 - 201539 778 318 aa, chain - ## HITS:1 COG:alr0738 KEGG:ns NR:ns ## COG: alr0738 COG1175 # Protein_GI_number: 17228233 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Nostoc sp. PCC 7120 # 5 276 14 290 308 169 35.0 8e-42 MNSHRWYTPWLLVAPAVVWTVVFALYPFINTIILSFTNTRPLVGGEFIGFANYAELWHDD MFWNAMVTTFIYVIICIPLLTILPLLLALLVEKKIPGISFFRTVAYFPVIASVVVVALIW SWMFDSRGLINQSLQWMGATSSPIPFLVDRWKLLGCAILLTVWKGLGYYMIVYLAALGNV DHDLHEAAALDGAGTFQRFRNVTIPGIRPAMVLIIALIAVSGMRIFSELYVLTNGTGGPG GEDSSLVMVIKQVGTGLSGQLGYASALSVVLFFLTLIPLTVIGWANNKDLRSGRQTRRGE GRARRAAAIQSATKETMA >gi|302034471|gb|GL383164.1| GENE 182 201619 - 202929 1347 436 aa, chain - ## HITS:1 COG:slr1897 KEGG:ns NR:ns ## COG: slr1897 COG1653 # Protein_GI_number: 16329947 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Synechocystis # 43 434 32 431 433 152 28.0 1e-36 MGNFTIGRRQLLGGTAALATVLAASACGMSGSGDKPSSQASVNPSAKLEGSIQFQTWSLK NEKFTPYFKKLVKSFEKEHPGTTIKWVDQPGEGYEEKVQQQATAGQLPDVINIPPNFAWQ LLKANKVMDLKKADAAAINTYIKGGIDAYTYDGYDGVYGYPWYLGTDLNWWNTEAFEKYG LDPKKLPTTLDELYAQAITMAEKSHGTMPLISIAPALGDLAAQGVKVYKDGKFTFNTDQA VEIIQKYVELYAKKAMPPEVLQNNYLGNSKLFLQGKVAWTTGSASFPVDLKKSAPKLFPH VAMTTRIGVPPLFVQGICVSADSKNPNLALAFAQYVTNNANQVDFVNLAQGFLPGTKEAN ENTDSFTSVISDPQMKKAAEALAGEMKSAKIGEPMAYTDAMKAYVGQQISSAMRGDISAK DALDRAVKYCNDHVTK >gi|302034471|gb|GL383164.1| GENE 183 203192 - 203752 175 186 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|170758590|ref|YP_001787770.1| ribosomal protein L32 family protein [Clostridium botulinum A3 str. Loch Maree] # 62 175 48 160 166 72 34 2e-11 MNTTHRHSDALSGLVLETHSLRRQVGQMIRVQRTVPAPADLDVDMIGVPEDSPLELDLRL ESVGEGVLATGTVEATLEGECSRCLDPIKEELLLDVQELYFYPDKEADEDASRVSAEETI DLDPVVRAAVVLNLPFSPLCRDDCGGLCPDCGANLNDDPDHDHPDRIDPRWSALEGLVGG DDSDRS >gi|302034471|gb|GL383164.1| GENE 184 203816 - 204007 345 63 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|213961304|ref|ZP_03389583.1| ribosomal protein L32 [Propionibacterium acnes SK137] # 1 63 1 63 63 137 98 4e-31 MAVPKRKMSRSNTRHRRSQWKTVATKLVTCANPACGEKHLPHTACPSCGGYGPRGDRRQV VEA >gi|302034471|gb|GL383164.1| GENE 185 204018 - 204758 308 246 aa, chain + ## HITS:1 COG:MT2995 KEGG:ns NR:ns ## COG: MT2995 COG0571 # Protein_GI_number: 15842471 # Func_class: K Transcription # Function: dsRNA-specific ribonuclease # Organism: Mycobacterium tuberculosis CDC1551 # 22 206 8 195 240 189 53.0 4e-48 MHASRDQNIGRPDVEDWPFLALLEELGIRCDPQLLDLALTHRSYAFENGGIPTNERLEFL GDAILEVGVTDYLYRAFPDKPEGQLAKLRSAVVSTVSLGQLARQLGIGPRIKLGKGEERT GGHDKTSILADTTEALLGAVELSAGLPDVLRLVHHLFDPLVDEADRSGAGTDWKTVLQEY CAEHGFDAPRYEIVGSGPDHNRRYCARANVDGRLHAAYTGHNKKEAEQGAARRAVSALMP SSHTGA >gi|302034471|gb|GL383164.1| GENE 186 204751 - 205521 344 256 aa, chain + ## HITS:1 COG:Cgl2021 KEGG:ns NR:ns ## COG: Cgl2021 COG0266 # Protein_GI_number: 19553271 # Func_class: L Replication, recombination and repair # Function: Formamidopyrimidine-DNA glycosylase # Organism: Corynebacterium glutamicum # 1 252 1 258 286 226 47.0 2e-59 MPELPEVETVRAGLEQFVVPVVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVNR RGKYLWFILDDGTAMLAHLGMSGQFRVSTQHAPQHRHTRIVITLDDGRDLRFLDQRTFGG LTLAPLVDGIPGPVTHIAPDPFEECFDVDEVVRRLCARRSAIKRSLLDQTLVSGIGNIYA DETLWRVRCHPETPCSRLSQSEAVELLQTACDVMAEAMSQGGTSFDSLYVNVNGESGWFS RVLDAYGREDEPLPPM >gi|302034471|gb|GL383164.1| GENE 187 205545 - 205760 108 71 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4506 NR:ns ## KEGG: HMPREF0675_4506 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 71 13 83 83 107 100.0 1e-22 MGMELQLGSLESASERLIESSLFAFSPTDVDRRSINPPTQGNGATAALAMPDDGRITVVS DTSGIGTSSGS >gi|302034471|gb|GL383164.1| GENE 188 205918 - 206259 261 113 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4505 NR:ns ## KEGG: HMPREF0675_4505 # Name: not_defined # Def: HicB family protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 113 1 113 113 223 100.0 3e-57 MSQTITDTARYSFHVTWSPEDAEFIATCVEFPSLSWLAGTPEKALTGLRIVVDEVVDDMR ANDEPVPEPLSTRHYSGKFQLRLGEDLHRRLVIEAAEQHLSLNQYVTRKLAVS >gi|302034471|gb|GL383164.1| GENE 189 206259 - 206471 155 70 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4504 NR:ns ## KEGG: HMPREF0675_4504 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 70 1 70 70 126 100.0 2e-28 MRANPRTTMQTCSACARSSSEQPGTTGGSHAVFKTPWLGDLRVNIQNDHGKAKTYQVRQV LQAIEKLKEQ >gi|302034471|gb|GL383164.1| GENE 190 206865 - 207524 562 219 aa, chain + ## HITS:1 COG:no KEGG:PPA1448 NR:ns ## KEGG: PPA1448 # Name: not_defined # Def: GtrA-like protein # Organism: P.acnes # Pathway: not_defined # 1 219 1 219 219 419 100.0 1e-116 MGGFRSLGIRPIISRVITEPTAPTRRRIKKRHLIEFIKFGVVGGSGFLVNIIVAIIMNKA NGGTEHAQDILFNLAGTRWNFRFTSLVWLVGFVVANITNFQLNRSWTFKREYRRGWWREF WPFFAVGSIAAIIGMFIKIFFTNPTSPIYLPEPWFNEGRGIQSREYWSQIFAIIVTMPIN FVVNKLWTFRAVKHSGELPMVASAVVPESYDDGDAAESR >gi|302034471|gb|GL383164.1| GENE 191 207584 - 207751 82 55 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4501 NR:ns ## KEGG: HMPREF0675_4501 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 55 1 55 55 94 98.0 1e-18 MVVFIIAMVLILAVALGVCAVVMLGLRHPGADPDASFWRYTATRVGEDLSGVRHR >gi|302034471|gb|GL383164.1| GENE 192 207802 - 208992 660 396 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762490|ref|ZP_02169555.1| ribosomal protein L28 [Bacillus selenitireducens MLS10] # 117 391 46 322 336 258 49 1e-67 MNPITLIWIILGILVLVTVVAAVTAGVSRRKALREGSKPAQVSPAPTESGKTVPEAETPA GGESAVGRPESEASQVAEPAVEAPEAPGSRMARLRRRLANSNNALARGLAELLSADKLDD DAWDDFETTLITSDLGVGPTTELVEKLRSELAIDGISDPAHAREVLHHELVELVGSDMDR SINLDRLEGKPAVVLMVGVNGTGKTTTCGKLARVLVAEGKTVLLGAADTFRAAAGEQLET WGERVGVRTVRKDAGADPASVAYEAVQTGIDEGVDVVLVDTAGRLHTKAGLMDELGKVKR VIEKLAPVSEVLLVLDATTGQNGLAQARVFSEVVDVTGIVLSKLDGSAKGGIVVQVQREL GVPVKLIGLGEGADDLAPFDADNFVTGLMGDDSAEC >gi|302034471|gb|GL383164.1| GENE 193 209003 - 210184 881 393 aa, chain + ## HITS:1 COG:MT1677 KEGG:ns NR:ns ## COG: MT1677 COG0627 # Protein_GI_number: 15841095 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Mycobacterium tuberculosis CDC1551 # 35 285 88 344 489 61 24.0 3e-09 MTDIAWFAPTGGVMMVSILSHKLCVAVLIAAFALPLAFVVWRAIAGTGSWWRKILRGLGH LVVILLAQALLITGVFLYINREYGFFTSWSDLLGEVQPEAPTHDLVPIRRTKVKDIPISK SNPHPNGQVSAITVPGADAQYARVPVWLPPQYFEKSERRTRFPVLFYIGGVNDTGQRDNK SIDFIGPATELIKGRKVNPFVIVFLPGKIRDGVDSECVDVGPYRHETWIMKIVIPRLESH YRVGHERGSRFIGGWSTGGYCAANLSTKYPRAFNAGFSLGGYYHPMFENPRIANMARPLM ANSSVVRRVQERKIERSVRFLSVLNPNDLQSWGPGRVPVVSNGQVGPDGGQFYHVAKGMK QFTFILLTGGGHRVSVYTPYIEQSLQWLGQFGL >gi|302034471|gb|GL383164.1| GENE 194 210260 - 211846 1518 528 aa, chain + ## HITS:1 COG:MT2984 KEGG:ns NR:ns ## COG: MT2984 COG0541 # Protein_GI_number: 15842459 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal recognition particle GTPase # Organism: Mycobacterium tuberculosis CDC1551 # 1 442 1 445 525 528 67.0 1e-150 MFDTLQDRLASTFKGLRGKGRLTDADIDATTRQIRIALLEADVNLSVVKEFVAAIKERCH GEELSKALNPTQQIVKIVNEELVEILGGQTRTVRFAKTPPTIVMLAGLQGAGKTTLAGKL ARWFKEEGHSPLLAACDLQRPNAVTQLQVVGERAGVHVFAPEPGNGVGDPVQVARDAVAE AEHKLYDVVIIDTAGRLGVDAEMMAQAADIKTATDPDETLFVVDAMIGQDAVNTAVAFQE GVGFDGVVLTKLDGDARGGAALSIARVVGKPIMFASSGEGLKDFDVFHPDRMASRILDMG DMLTLIEQAEKAFDQEQSQAAAAKLMAGKGEFGLDDFLGLMRQMRRMGPMSKIMGMLPGV GQMKGQIENIDEREIDRIEAIICAMTPAERADVSILNGSRRARIANGSGVEVRDVNNLVN RFVDARKMMSQMGQMMGPGAGRMMGSMAKRGSKQSKKKQKNRKGSGNPAKRAAQARQAAK KPQRSSGEAFGLQGQQQPSQEDLQKAMSEFKMPPSMQQMFNQTNKRPR >gi|302034471|gb|GL383164.1| GENE 195 211923 - 213086 1013 387 aa, chain + ## HITS:1 COG:Rv2915c KEGG:ns NR:ns ## COG: Rv2915c COG1228 # Protein_GI_number: 15610052 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Imidazolonepropionase and related amidohydrolases # Organism: Mycobacterium tuberculosis H37Rv # 34 383 16 366 370 363 58.0 1e-100 MTEDTQPLFHTHTHDGWTHTHMAREAQTAPDEDLRIRGVVLPDGEERELWVHDGVLVEGP LSGARTLADGCWIIPGLVDAHNHIGLDAHGAVGTETADEQARTEAKTGTLLIRDAGSPSD THWIDDRDDLPRVIRAGRHIARPKRYIRNYAAEVDPENLVAEVDRQARSGDGWVKLVGDW IDRDEGDLAPLWPADIAQAAIDRAHELGARVTAHCFSEEAPAQLVDAGIDCIEHGTGLTD ETIATMAEREVGLVPTLINIETFPSIAAQADGKLPKYAAHMRHLHTHRHETIAKAWDAGV PIYAGTDAGGTIKHGLIASEVRLLAAVGGAEMALGAASWRARAWLGGEQLGIGDSADLLV LDRDPRVDVGVLESPTYIVLRGRVVIR >gi|302034471|gb|GL383164.1| GENE 196 213277 - 213720 746 147 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50842922|ref|YP_056149.1| 30S ribosomal protein S16 [Propionibacterium acnes KPA171202] # 1 147 1 147 147 291 99 1e-77 MATKIRLKRLGKIRTPHYRVVVMDSRAKRDGRAIEEIGQYHPKADPSVIVIDSERVQYWL GVGAQPTEAVVALLKRTGDWQKFTGDTSPSGVKPQPERPNKDDLFNAALAEADEAPREAI TKKSEGAAADEASESAAGDNSGEKAEA >gi|302034471|gb|GL383164.1| GENE 197 213723 - 214001 168 92 aa, chain + ## HITS:1 COG:MT2976 KEGG:ns NR:ns ## COG: MT2976 COG1837 # Protein_GI_number: 15842451 # Func_class: R General function prediction only # Function: Predicted RNA-binding protein (contains KH domain) # Organism: Mycobacterium tuberculosis CDC1551 # 1 78 4 80 80 70 57.0 6e-13 MLADALEHLVSGIVANPDDVRVREKDLRRGRMLEVRVNPSDIGKVIGRQGRTASSLRTVI GALAGDEQIRIDFVDVDRRGSGRHSDHRGHRH >gi|302034471|gb|GL383164.1| GENE 198 213995 - 214162 56 55 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGTTYSSDDDLHRCRLFHCDSWGMMRLDKMPDTAHGPQPRQSGTTAHIVKGLAIQ >gi|302034471|gb|GL383164.1| GENE 199 214127 - 214648 211 173 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163796730|ref|ZP_02190688.1| 50S ribosomal protein L19 [alpha proteobacterium BAL199] # 3 158 5 159 179 85 38 1e-15 MEVVVGRVGRAHGLRGDVVVEVRTDEPDARFGVGATVQIEGSRRDLTVVRSRWAKGCLIV AFDEVKDRQGAEELRGSVLVVDVEPNDDPDDPDEFWDRRLRGLTVVDESGKSRGAVKDVL HMPAQDVLVIDVSGEEHLVPFVHQLVPTVDVASGWIVVSGIPGLLDSNAEEAR >gi|302034471|gb|GL383164.1| GENE 200 214651 - 215370 431 239 aa, chain + ## HITS:1 COG:MT2974 KEGG:ns NR:ns ## COG: MT2974 COG0336 # Protein_GI_number: 15842449 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-(guanine-N1)-methyltransferase # Organism: Mycobacterium tuberculosis CDC1551 # 1 234 1 230 230 256 56.0 3e-68 MRLDYLSIFPAYFDVLDISLLGKAAVNGLVEVHAHDLRDWTHDRHRTVDDTPCGGGAGMV MKPDPWGEAFDEIIGTEPDSSVHVIFPSPSGAPFTQSAAQELSSAVRIVFCCGRYEGIDH RVIDYARSMWTVHEVSLGDYVLNGGEVAALAITEAVVRLVPGFMGNPESLAEESFSAGQD GLLEYPLFTRPVSWRGLDVPEVLMSGHHGRIAKWRRDESVRLTCERRPDLTDSDFGVPH >gi|302034471|gb|GL383164.1| GENE 201 215581 - 216231 618 216 aa, chain + ## HITS:1 COG:no KEGG:PPA1439 NR:ns ## KEGG: PPA1439 # Name: not_defined # Def: succinate dehydrogenase cytochrome b-558 subunit # Organism: P.acnes # Pathway: Citrate cycle (TCA cycle) [PATH:pac00020]; Oxidative phosphorylation [PATH:pac00190]; Butanoate metabolism [PATH:pac00650]; Metabolic pathways [PATH:pac01100]; Biosynthesis of secondary metabolites [PATH:pac01110]; Microbial metabolism in diverse environments [PATH:pac01120] # 1 216 29 244 244 363 100.0 2e-99 MAVTGLILILFLLMHMFGNLKLLASNEEFNRYAGFLRTILNPILPGESFLWIFRIFMLLA IVLHIWSAIRVNKQRNIGTGGAGRYSVKKNLSPENTYAARTMFWGGWIIFLFLILHLLQF TISPDLLNNPPTDAAGRAGMVLTAFSHWWFVLIYLIAMIAVCMHVSHGFWSAFATLGVNV SGTARAVLRVCSWIVAIVIFVGFMTPPFLVLFGVIS >gi|302034471|gb|GL383164.1| GENE 202 216231 - 218258 1875 675 aa, chain + ## HITS:1 COG:Cgl0367 KEGG:ns NR:ns ## COG: Cgl0367 COG1053 # Protein_GI_number: 19551617 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Corynebacterium glutamicum # 33 675 36 673 673 602 49.0 1e-172 MTATAASNNNAALADQYWTTGDEIHDTKANHDLPIEKIWTDRQFTSRLVNPANRRKMTVI IVGTGLAGGAAAATLGEAGYRVENFCYQDSPRRAHSIAAQGGINAAKNYKNDGDSIYRLF YDTVKGGDYRSRETNVYRLAAVSANIIDQCVAQGVPFAREYGGLLDNRSFGGVQVQRTFY ARGQTGQQLLIGAYQALERQVHAGTVHMHTRHEMVELIVADGRARGIVTRDMVTGKIEEW FGDAVILATGGYGNVFFLSTNAMGCNATASWRAHRKGAYFGNPCYTQIHPTCIPVHGENQ SKLTLMSESLRNDGRIWVPKRAEDCEKDPRDIPEEDRDYYLERIYPSFGNLVPRDIASRQ AKYRCDEGRGVGPKVREVDSDGTEHMRARGVYLDFSEAIQRMGKDAVEKKYGNLFDMYQR ITDENPYEVPMRIYPAVHYTMGGLWVDYDLQSTIPGLFVCGEANFSDHGANRLGASALMQ GLADGYWVLPNTITDYLADSPKFGMVDEKHPSAVEARQAVESRINKLLTINGTRTVDSIH KELGHIMWEYCGMERSEAGLIKAIGLIRNLRNEFWTNVKVTGVNEELNQTLERAGRLADF LELGELMCIDALHRRESCGGHFRAESQTEEGEAMRHDDEYQYVAAWEWTGEGHKPTLHKE PLVYKSIQVKQRSYK >gi|302034471|gb|GL383164.1| GENE 203 218255 - 219028 707 257 aa, chain + ## HITS:1 COG:Cgl0368 KEGG:ns NR:ns ## COG: Cgl0368 COG0479 # Protein_GI_number: 19551618 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit # Organism: Corynebacterium glutamicum # 1 257 1 249 249 249 46.0 5e-66 MKINLRIWRQRNSKDQGRLVEYTLDGVSGDMSFLEMLDMLNENLTAQGEEPVAFDSDCRE GICGQCGVVINGVPHGGMGAAQPVRTTTCQLHMRSFADGSTITIEPWKSGAFPILRDLIV DRSALDRVIQAGGYVSVNTGAAPDAHAVQVNKKRSDRSFDAATCIGCGACVAACPNGSSM LFTSAKITHLAMLPQGQPERMRRVKAMAAQNDAEGFGGCTNIGECASVCPKGIPLESISQ LNRDLIASLFKHDGKDD >gi|302034471|gb|GL383164.1| GENE 204 219049 - 219246 84 65 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|282854579|ref|ZP_06263914.1| ## NR: gi|282854579|ref|ZP_06263914.1| hypothetical protein HMPREF9206_0031 [Propionibacterium acnes J139] hypothetical protein HMPREF9206_0031 [Propionibacterium acnes J139] hypothetical protein HMPREF9567_02205 [Propionibacterium acnes HL013PA1] hypothetical protein HMPREF9574_00219 [Propionibacterium acnes HL074PA1] hypothetical protein HMPREF9575_00355 [Propionibacterium acnes HL110PA1] hypothetical protein HMPREF9576_02332 [Propionibacterium acnes HL110PA2] hypothetical protein HMPREF9580_00769 [Propionibacterium acnes HL087PA2] hypothetical protein HMPREF9585_00671 [Propionibacterium acnes HL083PA1] hypothetical protein HMPREF9587_01094 [Propionibacterium acnes HL025PA1] hypothetical protein HMPREF9589_00516 [Propionibacterium acnes HL059PA1] hypothetical protein HMPREF9593_00039 [Propionibacterium acnes HL046PA2] hypothetical protein HMPREF9604_00212 [Propionibacterium acnes HL036PA1] hypothetical protein HMPREF9605_01079 [Propionibacterium acnes HL036PA2] hypothetical protein HMPREF9611_01233 [Propionibacterium acnes HL063PA1] hypothetical protein HMPREF9612_00238 [Propionibacterium acnes HL063PA2] hypothetical protein HMPREF9616_01318 [Propionibacterium acnes HL007PA1] hypothetical protein HMPREF9617_00160 [Propionibacterium acnes HL056PA1] hypothetical protein HMPREF9591_00418 [Propionibacterium acnes HL086PA1] hypothetical protein HMPREF9597_02284 [Propionibacterium acnes HL005PA4] hypothetical protein HMPREF9598_00049 [Propionibacterium acnes HL050PA1] hypothetical protein HMPREF9600_01316 [Propionibacterium acnes HL050PA3] hypothetical protein HMPREF9614_00129 [Propionibacterium acnes HL002PA2] hypothetical protein HMPREF9618_01110 [Propionibacterium acnes HL082PA1] hypothetical protein HMPREF9619_01414 [Propionibacterium acnes HL082PA2] hypothetical protein HMPREF9620_01608 [Propionibacterium acnes HL037PA1] hypothetical protein HMPREF9564_01351 [Propionibacterium acnes HL053PA1] hypothetical protein HMPREF9566_01326 [Propionibacterium acnes HL045PA1] hypothetical protein HMPREF9594_01466 [Propionibacterium acnes HL005PA1] hypothetical protein HMPREF9595_01874 [Propionibacterium acnes HL005PA2] hypothetical protein HMPREF9596_00035 [Propionibacterium acnes HL005PA3] hypothetical protein HMPREF9565_00129 [Propionibacterium acnes HL053PA2] hypothetical protein HMPREF9569_01348 [Propionibacterium acnes HL078PA1] hypothetical protein HMPREF9610_01613 [Propionibacterium acnes HL027PA2] hypothetical protein HMPREF9615_00541 [Propionibacterium acnes HL002PA3] hypothetical protein HMPREF9572_00412 [Propionibacterium acnes HL072PA1] hypothetical protein HMPREF9590_00212 [Propionibacterium acnes HL059PA2] hypothetical protein HMPREF9341_01065 [Propionibacterium acnes HL103PA1] hypothetical protein HMPREF9338_01344 [Propionibacterium acnes HL096PA2] hypothetical protein HMPREF9337_01872 [Propionibacterium acnes HL096PA3] hypothetical protein HMPREF9344_01224 [Propionibacterium acnes HL097PA1] hypothetical protein HMPREF9570_02072 [Propionibacterium acnes HL043PA1] hypothetical protein HMPREF9584_02127 [Propionibacterium acnes HL092PA1] hypothetical protein HMPREF9581_01232 [Propionibacterium acnes HL087PA3] hypothetical protein HMPREF9586_00244 [Propionibacterium acnes HL083PA2] hypothetical protein HMPREF9579_01151 [Propionibacterium acnes HL087PA1] # 1 65 1 65 65 120 100.0 3e-26 MLVFTKISFPERRTVPLWQEPDTDNTAVFFHTHGSGIKSTITRARQQAVLHNITGLRHRE VSEPE >gi|302034471|gb|GL383164.1| GENE 205 219279 - 219632 588 117 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50842915|ref|YP_056142.1| 50S ribosomal protein L19 [Propionibacterium acnes KPA171202] # 1 117 1 117 117 231 100 3e-59 MSNIIDEIDKASMRDDIPEFRPGDSVKVHVKVVEGSRTRVQVFSGIVISRTGGGVQESFT VRKLSFGTGVERTFPLHSPIIDKIEVDRHGAVRRAKLYYLRGRRGKAAKIKERGSAR >gi|302034471|gb|GL383164.1| GENE 206 219803 - 220627 474 274 aa, chain + ## HITS:1 COG:Cgl1987 KEGG:ns NR:ns ## COG: Cgl1987 COG0681 # Protein_GI_number: 19553237 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal peptidase I # Organism: Corynebacterium glutamicum # 39 248 37 260 262 105 34.0 1e-22 MADDYRARRAANGDTRDSDDATARGEQASGWQRFRSGAIEVVLIVVGALIISAVLRGFVA QMFVIPSKSMQNTLQVGDRVIAVKAADFHRGDVVVFKDTEHWLPAAQDRRSVPGQILEFV GLLPNKSSNYLIKRVIGMPGDTVACCNVNGQVTVNGKALDERSYLYSENGEMVKPSAMEF RVTVPRGRMFVLGDHRNASGDSRYHLQDLDPGEYTGAPAFVPLDDVVGPAKAILMPLNRI EGLGTPDIFRGILDRSSSAPGKARICVGNACCPK >gi|302034471|gb|GL383164.1| GENE 207 220636 - 221277 349 213 aa, chain + ## HITS:1 COG:ML1611 KEGG:ns NR:ns ## COG: ML1611 COG0164 # Protein_GI_number: 15827847 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HII # Organism: Mycobacterium leprae # 13 206 24 215 240 196 58.0 3e-50 MSVRVGSGPMGHERALARAGLGPVAGCDEAGRGACAGPLVAAAVILDDRRSGRIAGLADS KTLSAAKREALFNVIMDKALAVSWVRVEADECDRLGMQEADISGLRRAVVRLGVEPGYVL SDGFPVDGLTVPDLGMWKGDSVCACVAAASIVAKVARDRIMIAMDAEIPGYDFAVHKGYA TALHQRRLKELGPSRQHRMSYANVRRAARLHSS >gi|302034471|gb|GL383164.1| GENE 208 221274 - 221585 389 103 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4486 NR:ns ## KEGG: HMPREF0675_4486 # Name: not_defined # Def: protein often found in Actinomycetes clustered with signal peptidase and/or RNaseHII # Organism: P.acnes_SK137 # Pathway: not_defined # 1 103 1 103 103 182 100.0 3e-45 MSAEDLEQYENRMELELYREYKDVVGIFKYAVETERRFYLCNVVDLKVRTEGGDVYYEVS MADAWVWDMYRPSRFVKSAKILTFRDVSIEEIVHADFDEVPSK >gi|302034471|gb|GL383164.1| GENE 209 221853 - 222272 368 139 aa, chain + ## HITS:1 COG:Rv2898c KEGG:ns NR:ns ## COG: Rv2898c COG0792 # Protein_GI_number: 15610035 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease distantly related to archaeal Holliday junction resolvase # Organism: Mycobacterium tuberculosis H37Rv # 25 138 9 127 128 98 47.0 4e-21 MTPKPLSAELTTPRGAALRGRRGCRPAFGAWGEDLAAQYVESLGWTIIARNWTCDVGEID LIARDDQTVVFIEVKARSGTGFGDPLESITTAKVRKLHELALAWLVNQDDGVHSVRIDAI GVMVRPGAEPTVTHVRGIR >gi|302034471|gb|GL383164.1| GENE 210 222320 - 223792 249 490 aa, chain + ## HITS:1 COG:Rv2897c KEGG:ns NR:ns ## COG: Rv2897c COG0606 # Protein_GI_number: 15610034 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATPase with chaperone activity # Organism: Mycobacterium tuberculosis H37Rv # 1 486 18 503 503 400 52.0 1e-111 MVEVEAAISSGLPRTVLVGLPDAALHEARDRCRAAVCATGLSWPSNVLTINLTPAGLPKA GTHFDLAIAAATLAADGKVPQALFGSTVLIGELGLDGRVRPVRGVLPALLAAREAGFERA VVPASQSDEASLVEGLTIWPVGHLGDVVDVLHGRPVVPPEGPIVGSPDTDPGIGDLTEVI GQHEARRALEVAAAGRHHILLRGAPGCGKSMLARRLPGILPRLDHRDALEVTALHSLAGR GSGRLMTRPPLAQPHHSVSMAAMVGGGVRIAQPGAISLAHRGVLFLDEAPEFAPKVLDSL RGPLETGEIVIGRSQAHTTFPARFQLVMALNPCPCGLADDPSGRCTCTPQQVRRYSGRLS GPILDRVDVTVRMRPLTSAHLLDASALPAGESSAAVHERVAQARERAAARWRGVPWRCNA EVPGKVLRQMLPANDATRIIEDALTTGRLTARGVDKVLRIAWTVADLEGKDEVDKACVAE AMGMRRGRLR >gi|302034471|gb|GL383164.1| GENE 211 223789 - 224922 235 377 aa, chain + ## HITS:1 COG:Rv2896c KEGG:ns NR:ns ## COG: Rv2896c COG0758 # Protein_GI_number: 15610033 # Func_class: L Replication, recombination and repair; U Intracellular trafficking, secretion, and vesicular transport # Function: Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake # Organism: Mycobacterium tuberculosis H37Rv # 11 370 24 371 389 187 42.0 3e-47 MTWTSERLARAALTAAAEPGVMAKRLVEMTAEELWQHMLTDSGERWHKRAKSLDVDQLVE RSEKAAMRFLIPGDEEWPTGLDSLARVGKSGMGGAPVGLWVTGPAHLADISQRAVAIVGC RSASSYGQDVAVEMAYRLVRGHCDGTGSHTVISGGAFGIDVAAHRGALSARGNTVSVLAC GLDTLYPRGNSAVLEQIAGTGALVSELPLGRHPTRPGFLARNRLIAALTTGTVVVEAGWR SGAINTASWANALGNAVMAVPGPVTSSRSTGTNKLIRDGEAILVRDADDVRGIVGELAPE PERPAGRSLPTDILDAIELAVHEALPAHGSCGLDELAVLAGVPVAQCSAALSVLEQLGMA ACCLDGTWSVTLARERR >gi|302034471|gb|GL383164.1| GENE 212 225373 - 225588 274 71 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4482 NR:ns ## KEGG: HMPREF0675_4482 # Name: not_defined # Def: CsbD-like protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 71 1 71 71 74 100.0 1e-12 MGLSDKINSKSDEAVGAAKEKIGGLTDDSDLKSAGADQKASGKVAQKVEDVKDKANDLKH NVQAAADKLKG >gi|302034471|gb|GL383164.1| GENE 213 225805 - 226419 657 204 aa, chain - ## HITS:1 COG:no KEGG:PPA1425 NR:ns ## KEGG: PPA1425 # Name: not_defined # Def: putative lysophospholipase # Organism: P.acnes # Pathway: not_defined # 1 204 174 377 377 426 99.0 1e-118 MYPGTVDGIVSSGGGTIVNVDGPDTEGATTITPDNLNFFARHALPQISQLLPMAQLTSFN GRLVKDFVKNPKAIRMPSGPLSADIILPGYPPYGLCSDPAVRFDHWHRDPLYNHYMRLGL VEQMGVAEAYNVMNAHDFKAPTLIMHGENDGLVPSYFDVNWYNAITSKDKKIIQWHGLMH EIFNEPTKDQVIKTAIDWIDAHNK >gi|302034471|gb|GL383164.1| GENE 214 226400 - 226942 454 180 aa, chain - ## HITS:1 COG:alr0851 KEGG:ns NR:ns ## COG: alr0851 COG2267 # Protein_GI_number: 17228346 # Func_class: I Lipid transport and metabolism # Function: Lysophospholipase # Organism: Nostoc sp. PCC 7120 # 47 168 2 115 281 68 33.0 4e-12 MSFPRKLSALAVASTMAVTGVTMATPALANTGTSSQPAAAAPAINQVHKETGYFKTTDKL GTQLFYRKDIVPNAKGAVVLVHGLMENSSNYEYLTKSLTNAGYSVYRFDNRGHGRSAAPY INNAIPRGQFDDWWNIESDIHQVVGTAHKENTGKKVFLLGHSMGGIAVHTVLRNHVSRNC >gi|302034471|gb|GL383164.1| GENE 215 227744 - 229108 1002 454 aa, chain + ## HITS:1 COG:MT2199 KEGG:ns NR:ns ## COG: MT2199 COG0624 # Protein_GI_number: 15841632 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Mycobacterium tuberculosis CDC1551 # 22 451 14 445 448 335 44.0 1e-91 MSDLFSMTVENLVDGPDCPQAEVVDICSRMIQIDSQNFGPQDARGEVEMCHYVTGLLDEI GVGVTLHESEPGRVTLVAEWAPEGTDTSRPALLLHGHSDTVPFEAADWTHHPLSGEIHDN CVWGRGAIDMKGFLAMVLSAIRARQRRGEVPSRPIRFIMFADEECSGTLGSTWLGATHPE AFDGVTEAISEVGGFSLTTPQGKRVYVIQSAEKGLWWFRMSATGSAGHGSMRNPDNAVTR VLDALSRIDSYQWPDLHHPVQEEFLNQVAAMWGLTIDRDDLESSLSPIGSLSRMVAACCA HNVTPTVLSAGYKVNVVPTRASAEVDARFIPGAEEDMILTIKSLAGPGIDFETISRKPAT AAPFEGAAVDAIRRAVDAEDPGAVVLPYLNSAGTDAKGFAVLPDGRRINYYGCTPLRLPA DFDFINLFHGVDERVPVGSLVFGAKVVDHILQEA >gi|302034471|gb|GL383164.1| GENE 216 229111 - 230418 921 435 aa, chain + ## HITS:1 COG:BMEI0836 KEGG:ns NR:ns ## COG: BMEI0836 COG0372 # Protein_GI_number: 17987119 # Func_class: C Energy production and conversion # Function: Citrate synthase # Organism: Brucella melitensis # 13 435 12 436 437 433 50.0 1e-121 MSVPHKKPEGGPTATLILDGQEYTLPVIAGTTGDRVIDISNLRQLTGGVTTFDPAFANTA SCRSAISWIDGEEGVLTYRGLPIETLAKERVSFVETAWLLIFGHLPTEAQRDDFRNRLTE YSALHRSMNLHFNAFPPNGHPMAIMSSMINAMSTHDRPRITDEESFTDAAAKLMSKVRTI AAASYKASIGEPAIYPRYDLKYVENFMHMMFSLPYRAYEPDPVAARALNLFFVLHADHGQ NCSTSTVRMVGSSGANLFTSCSAGVCALWGDRHGGANVNAVLALQRIRDSGLIPRQYLAK AKDSGERISGFGHRVYRNWDPRARIFRSVVGPLLDTMHKPDPLLDVAMELEEAVLADDYF IERRLYPNVDFYSGIVLRALGIPLNMFTVMFAIGRMAGWIAHWKEVFEDPTTRISRPREL YDGPVSTPWVPRGER >gi|302034471|gb|GL383164.1| GENE 217 230430 - 231398 493 322 aa, chain - ## HITS:1 COG:Cgl1480 KEGG:ns NR:ns ## COG: Cgl1480 COG0667 # Protein_GI_number: 19552730 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Corynebacterium glutamicum # 6 312 2 311 312 219 42.0 4e-57 MRMRTVGASGLKVSAIGLGSLTWGGQTDARKVRSLVRRFVDAGGNLVDTAPAYGGGFAEQ LIGKLTHTDISRDDLVIATKAGFIVEGHKRIVDTSRSALLRDLEGSLRRLHTDHVDLWQV HAWGDAPIEETCAALDHAVTSGMARYVGVSNFVGWQAATAATWQRATGTRTPLVSNQVEY SLLARRAEIEVVPSAQHHGMGLLAWSALGRGVLGGRYRHGTPKDSRGGSDRLSWFVQPYL TRKSNAVVEAIVKAADGLGATVPQIALAWVRDAPVVASALVGPRTTSQLEELLGADEVSL PKEITSALDDITGGPNLAREEA >gi|302034471|gb|GL383164.1| GENE 218 231607 - 232188 266 193 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4474 NR:ns ## KEGG: HMPREF0675_4474 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 193 1 193 193 373 100.0 1e-102 MTRRTFRLERPDRVVVGTVGQPGARVFHLQVREGSRVVTVRCEKVQIDQLALQMDRILDG LAAHVADVFVPPSVDNPDDLAPLDAPLEEEFAVGTMAMAFDDETKRIEIEMYAASDDELM IKDPAMLLTTLPEVAPDSLEILMTTSQARQFVARCRVVVASGRQYCPYCSQQILSAEGHL CPRSNGYRKPLVW >gi|302034471|gb|GL383164.1| GENE 219 232287 - 232985 331 232 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4473 NR:ns ## KEGG: HMPREF0675_4473 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 232 33 264 264 434 99.0 1e-120 MRDADLRLWVYKPTARKRRLHDFPSGTLARREVAACLLSQVMGIGLVPVTVLVGDGPQGP GSMQRWIDDDVESPLVRVDVTERLPPHWHGFPLGVDEDDREIGLAHSPHPALRALALFDA VVNSADRKGGHVLVGPDPDLGGTAHVWAVDNGLTFHTDPKLRTVLWGWAGQPLEPVEEMM LDEVLTIADTDFEDLITPEEIDAVRQRAQGLLEFGAFPGPSGLRPALPWPPM >gi|302034471|gb|GL383164.1| GENE 220 233054 - 233725 519 223 aa, chain + ## HITS:1 COG:Cgl0064 KEGG:ns NR:ns ## COG: Cgl0064 COG3201 # Protein_GI_number: 19551314 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinamide mononucleotide transporter # Organism: Corynebacterium glutamicum # 5 216 4 216 230 222 59.0 4e-58 MSDVLASLLNAQLDVGLGKPILWREVIGNLFGLASALGGARRRLWAWPVGIIGNVILFTV FLGGVFHTPQDLNLWGQAGRQIFFLATSAYGWVVWAATRHNNGASQVAVHPRWATRRERI LALTATVIMLVVFTFALKALGSWGPLSDSWILTGSILATWGMARGWNEFWFVWIAVDVVG VPLLATAQYYPSALMYVFYGAFCLYGFVTWWRAQRAVTDDPCH >gi|302034471|gb|GL383164.1| GENE 221 233792 - 234058 289 88 aa, chain + ## HITS:1 COG:MT2182 KEGG:ns NR:ns ## COG: MT2182 COG0140 # Protein_GI_number: 15841614 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosyl-ATP pyrophosphohydrolase # Organism: Mycobacterium tuberculosis CDC1551 # 3 88 8 93 93 108 67.0 2e-24 MSKTFEELFAELAIKSQTRPAGSGTVEELDRGVHAIGKKIVEEASEVWMAAEHEGNERLA EEISQEIYHLQVMMIKQGLSLDDVYKHL >gi|302034471|gb|GL383164.1| GENE 222 234116 - 234970 737 284 aa, chain + ## HITS:1 COG:Cgl1468 KEGG:ns NR:ns ## COG: Cgl1468 COG0040 # Protein_GI_number: 19552718 # Func_class: E Amino acid transport and metabolism # Function: ATP phosphoribosyltransferase # Organism: Corynebacterium glutamicum # 4 284 1 281 281 296 56.0 4e-80 MSDLLRIAVPNKGALSEAASSLLAEAGYRQRTDHKDLTLVDEENGVEFFYLRPRDIAVYV GEGTLDIGITGRDLLLDSNADATEIKGLGFGHSRFRFAAPKSPQNTIEGLAGKRIATSYP GLLSAFLTERGIDAHLIHLDGAVESSIRLGVADAIADVVETGTTLRRAGLEIFGDVILES EAVLVQRRDFAGSTTFDHFMRRIDGVQVARTYVMVDYDVSAEALDAATALTPGLEAPTVS PLSKDGWYAVRAMVPRTVVQGLMDQLWDAGARAILSTELSACRL >gi|302034471|gb|GL383164.1| GENE 223 235032 - 235649 362 205 aa, chain - ## HITS:1 COG:no KEGG:PPA1416 NR:ns ## KEGG: PPA1416 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 205 1 205 205 359 99.0 4e-98 MWNSGGMSEPTVVAVVTIVLIVLPLLWALSGWFSRRSSRAMLRGVGLALIPVGLVLTGLM RLLVRAIRLVVDWFAGTVMTTTIWIGIIVIAVGLVTWFVSGIMPPVDRETGRQRRQDHAA RKQARGDSQTKGPRSTKTPDHNPTGNNAPTTGTAPSQGASKAQQTPTDAPVATSGPASSP KPTISTADKDEDAELEEILRKRGIE >gi|302034471|gb|GL383164.1| GENE 224 235716 - 236189 220 157 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4468 NR:ns ## KEGG: HMPREF0675_4468 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 157 1 157 157 278 100.0 5e-74 MSVPLSPTGGDMGDADPRARAVLATCLTDDPEVYRQSYLEAVSTLCAGVRLFMPVMADEE GEIGAVKLTNKLGNTALLAFTGIDSLTAWDSRARPVPGRLPDLAATVTEVAADALLIDVA GPAPLVIGTDVLKPIEDGGRLVKLDDGWGWARSGGLG >gi|302034471|gb|GL383164.1| GENE 225 236149 - 236355 125 68 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MMVGDGRAAGGWDDPVSFAGVVLSLRLAPICGDVISCRTMSEAIRAKLVLRKRGPDLPPR RIPFAGLC >gi|302034471|gb|GL383164.1| GENE 226 236378 - 237184 770 268 aa, chain + ## HITS:1 COG:Rv1641 KEGG:ns NR:ns ## COG: Rv1641 COG0290 # Protein_GI_number: 15608779 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation initiation factor 3 (IF-3) # Organism: Mycobacterium tuberculosis H37Rv # 41 238 1 199 201 232 65.0 6e-61 MCVHPTCQVFAHSRGPYFVSGSWRRSYAPRSKRTDIREDPISTEPRINERIRVPEVRLVG PNGEQVGIVRVEQALQLAREQDLDLVEVAPQARPPVVKLMDYGKFKYEAAQKARESRRNQ ANSIIKEMKLRPKIDDHDYETKKGHVLRFLKAGDKVKITIMFRGREQSRPELGVNLLRRL ADDLTEYATVESPPKQEGRNMLMILAPTRKKNQAKADQKAERDRRAAERAEAAEADKAYE AAQRAAAGTAKKKKKKGPADNMDPDIDL >gi|302034471|gb|GL383164.1| GENE 227 237273 - 237491 345 72 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50842894|ref|YP_056121.1| 50S ribosomal protein L35 [Propionibacterium acnes KPA171202] # 5 72 1 68 68 137 100 4e-31 MELSMPKMKSHSGTKKRFKVTGSGKVTARKAGKRHLNEHKSSRVTRRLTGETVLSKGEAA KVKKLLAGHPGR >gi|302034471|gb|GL383164.1| GENE 228 237595 - 237966 609 123 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|213961272|ref|ZP_03389551.1| ribosomal protein L20 [Propionibacterium acnes SK137] # 1 123 1 123 123 239 100 1e-61 MARVKRSVNAKKKRREVLDQASGYRGQRSRLYRKAKEQTLHSATYSFRDRRAKKGDFRSL WIQRINAASRAQGMTYNRFINGLKNAGVEVDRKMLAELAVSDINAFNSLVEVAKASQPQN AAA >gi|302034471|gb|GL383164.1| GENE 229 237968 - 238789 181 273 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 [Bacillus selenitireducens MLS10] # 81 272 51 247 255 74 25 4e-12 MAMTGGPNDDYLGWDRISKGSLRSARRLSSRRGRDESGLFLVEGAQAVREALAWPGKVNL LATSDPARDAEHVEVATCRGVRVVVLTDEDVNALSDTVTSQGIFAVCRQVTRRELPDEAV RLAVICAQVRDPGNAGTVIRCADAFGADCVILTRGSVDPHNPKTVRSSVGSIFHLPVVVG VELADAVEWAHQHQMSVLAADGGGHSLDVVARSGCLKRPIAWLMGNEAWGLPEADRALAD EIVGVPMWGAAESLNLSTAAAVVLYATASEQRA >gi|302034471|gb|GL383164.1| GENE 230 238912 - 240021 946 369 aa, chain + ## HITS:1 COG:MT1687 KEGG:ns NR:ns ## COG: MT1687 COG0016 # Protein_GI_number: 15841105 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase alpha subunit # Organism: Mycobacterium tuberculosis CDC1551 # 16 368 2 341 341 353 53.0 2e-97 MSGPNTNYDPVQVSALDADQVEARVAEALEAIARASTTAELKQVRITHTGDRSALALANR EIGALPPAARKDAGKRIGQARGRVNQALKARQQELAEAELEARLAAETTDVTLPVVTSPQ GAPHPITALIDNVCDVFTAMGWEVAEGPEAESEWFNFDALNLGTDHPARALQDTLWLDPV DDGKCMRTATSPVQIHTLLKQQPPVRIISPGKVFRADEYDATHLPVFHQVEGLCVDKGIT MGHLKGTVDAFARAMFGAVRTRFRPHYFPFTEPSAEVDLECFVCHGASVGNPDRPCRTCR SEGWIEWGGCGVVNPRVLIACGIDTDVYSGFAFGMGIDRTVMFRNNAPDLRDFVEGDVRF SRSLRGGAR >gi|302034471|gb|GL383164.1| GENE 231 240018 - 242537 1884 839 aa, chain + ## HITS:1 COG:Cgl1357_2 KEGG:ns NR:ns ## COG: Cgl1357_2 COG0072 # Protein_GI_number: 19552607 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase beta subunit # Organism: Corynebacterium glutamicum # 175 838 1 672 673 478 43.0 1e-134 MKVPMSWLQAMVNLPDGTTTDKVAKALTNHTATVEKVEVVGGELTGPIVIGHILSSVPEP QKNGKVINWCRVDVGPRYNAEGHPKNIEEGVEGRGIICGAPNAVEGAWVVVSLPGAVLPG GFAISARKTYGHMSDGMLCASDELGIGVDDAGIITLPPSVEGHQLVPGEDALPILGVPEE VLDVDVTPDIGYCMSMRGIAREVAHAMSVHFRDPYDEEPIGPVLGPVAVDVQSDACSQFI ALPVSGMNLGAPTPRFITDRITRAGMRPINLVVDVTNYVMLESGQPLHAYDADNVSGTIV VRKAHEGEHLLTLDDTDRTLDPDDLVIADDSGAIGLAGVMGGAATEVTAETTSIILEGAH FDPMTVARAYRRHKLGSEASRRFERGVDPICAHTAAVRAAELLAQYGGATVGEPTVVGEV PEMPRQTINADLPNRILGTKVPTEEVIEILTRSGVKVTALGDSLHLVAPTWRPDLVDAYD YVEEIGRKIGFDRIKAVLPPSLGASGLTKAQRGRRRVLRSVVEAGFVELITLPFIGDKDL DVLGISGDDTRHATVKLANPLDDTRPYLRTTLLPGLFHAVTTNMSRSQDDLAVFESGTVF RAVTPAAAPRPGVDERPSDEVLAEIDAALPAQPRMLAAVICGSWLPDRWDGESVKADWRH AVLVAQKAADALGVRLVRKADRQAPWHPGRCAALIVDGKVIGHAGELHPTVVSKAGLPQR TCAVEFNLDALVAAAPRGGEVMAISSFPVAKEDVALVVDKSVAAEDVRQALIEGAGPLLE SVELFDVYEGEQVGDNRKSLAFNLRLRGADRTLTDSEALETRDAAVARAEETCGAQLRS >gi|302034471|gb|GL383164.1| GENE 232 242779 - 244281 889 500 aa, chain - ## HITS:1 COG:BH1748 KEGG:ns NR:ns ## COG: BH1748 COG0502 # Protein_GI_number: 15614311 # Func_class: H Coenzyme transport and metabolism # Function: Biotin synthase and related enzymes # Organism: Bacillus halodurans # 138 463 1 324 333 295 42.0 2e-79 MSKESSPKTSRPFVNSVGKFGVLRWHRRWASVNRKNFVAYRSKQALLISNVPVQRSRLHS KTLSQTSHGQVSEPVRVENLYSCPNNVRLRQAHDDSLDDDTISGGSPHWCCLMDYIESRS ILNGVQDVSSLGRTRVLLNLADMTERGLRGESITREEALEILRSSDDELMSIIAAAGKVR RHFFDNRVRLNYLVNLKSGLCPEDCSYCSQRLGSRAEITKYSWADPQKVHDAVEAGIAGG ARRVCMVASGHGPSRRDVERVNGMVRSLKADHPDVEVCVCLGFVDDEKAASIKEAGADAY NHNANTARSHYGKICSTHSYEDRMDTVEVLKRNGLSPCSGVIAGMGETDEEFVDVIFDLR KHGVDSVPVNFLLPFEGTPLAGGAQHITPQWCLKRLAMVRFAHPDSEVRAAAGREQHIRT MQPLALEVVNSIFLGDYLTSEGAAGAADLQMIEDGGFIPEGADGQPMVHTDVNSHHSANL PVNAVPIRHRGIGTEVPANA >gi|302034471|gb|GL383164.1| GENE 233 243958 - 244569 409 203 aa, chain + ## HITS:1 COG:Cgl2053 KEGG:ns NR:ns ## COG: Cgl2053 COG1309 # Protein_GI_number: 19553303 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Corynebacterium glutamicum # 15 202 4 187 191 89 31.0 4e-18 MWTTPGNGVVVKGVIVSLTKPDVVRAGVEILDAYGLGDLSMRRLAERLGVKAGALYWHVA NKQSLLAAVSDEILAVDGGPTTVPSQDAELSDGVDEWARCFRATLLAHRDGAELVASTIS VGLGKTDPTVKLRQFMECQGVCRERADSVCRALVHLVLGHTMEEQTRTQLHDLGVVGKID PARQDDDFDLALAIFVAGLVSLL >gi|302034471|gb|GL383164.1| GENE 234 244665 - 245213 294 182 aa, chain + ## HITS:1 COG:MT1695 KEGG:ns NR:ns ## COG: MT1695 COG1438 # Protein_GI_number: 15841113 # Func_class: K Transcription # Function: Arginine repressor # Organism: Mycobacterium tuberculosis CDC1551 # 1 164 1 170 201 101 41.0 7e-22 MSEGQCAPTSRTARHARIRALIEEGRISSQAELGEILASEGFVASQGTLSRDLVEIGAVR GRDHAGNPCYSIPEGEHPSDVTTGSPAWVKLARMTKELCTGVRNNEYLVVLKTPPGAAQY YGSAIDKAGLDIVLGTIAGDDTIALICAIGVDAGELADAFSQMAVTGVPAEILSRSVREE FA >gi|302034471|gb|GL383164.1| GENE 235 245297 - 246553 676 418 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 [Phaeobacter gallaeciensis BS107] # 2 414 7 407 418 265 36 2e-69 MSDLLDDLEWRGLVADSTDREALEAHLAQGPVTFYVGFDPTAKSLHIGHLVQLMLVRALQ ERGHKPLLLVGGATGLIGDPKMTGERHMNDREVVAEWVESIKDQVSKYVDTDGRNTAQIV NNYDWTVKYTALDLLRDVGKHFSVNRMLARDVVARRLESGISYTEFSYVLLQSLDFYELH KRYGCTLQTGAQDQWGNITAGAEFIRKTTGDVVHGLVTPLITKADGTKYGKTESGTVWVD PELTSAYAFHQFFLNAEDSKVIEYLKIFSPRSREEIEDLARKTEEEPWRRAAQHCLADDL TDLVHGVEQRKAAEAAAQAIFGRGELRDLDERTVLSLSDELGAAHHEGGEYPTVVGAMVA AGVVDTKSAGRRAVAEGGAYLNNVKVADPDQRLTDDDFLCGRVALVRRGKKTVGALTR Prediction of potential genes in microbial genomes Time: Wed Jul 20 20:29:23 2011 Seq name: gi|302034470|gb|GL383165.1| Propionibacterium acnes HL005PA4 genomic scaffold Scfld25, whole genome shotgun sequence Length of sequence - 1115 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 2 - 815 598 ## HMPREF0675_4714 hypothetical protein 2 1 Op 2 . - CDS 751 - 1110 95 ## PPA1666 hypothetical protein Predicted protein(s) >gi|302034470|gb|GL383165.1| GENE 1 2 - 815 598 271 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4714 NR:ns ## KEGG: HMPREF0675_4714 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 271 1 271 291 483 97.0 1e-135 MPVPALAAGGPKPADYAAQAGKAADYINGHSADLTKGDLGPELDGALALISAGKTDAKLF GMIKKDIKAKGPSYCTSKNVGGCAKVTITLLAAGEPTTYGGTDYAKPVTSLPDSALKERP FHQALDMIALERLGKPIPQKLFKSITDYVSARPGRNYPSTDGLMLAALSHVVSTAYGQEG ITAVKAALVKRLDADRQTDGWGWPDHGANVRATTRVAPGLYRAGDANHKDQAVKGQAWLA GQQQVDGSFPSNVVSPAWTMMATVQAVPVLR >gi|302034470|gb|GL383165.1| GENE 2 751 - 1110 95 119 aa, chain - ## HITS:1 COG:no KEGG:PPA1666 NR:ns ## KEGG: PPA1666 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 3 98 9 103 181 172 92.0 5e-42 MGGLMPRWCGEAGGSPALSRNRDHACVVWESGYQVTWGWCGVPLRVTGSASTRERLCCLW SPLGTFPWRDKMIEAATTKRRRVLGSLVVAAVVTGTVGGACPGSSSGWAETRRLRCPGR Prediction of potential genes in microbial genomes Time: Wed Jul 20 20:29:35 2011 Seq name: gi|302034469|gb|GL383166.1| Propionibacterium acnes HL005PA4 genomic scaffold Scfld31, whole genome shotgun sequence Length of sequence - 15664 bp Number of predicted genes - 17, with homology - 16 Number of transcription units - 10, operones - 5 average op.length - 2.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 81 - 338 243 ## PPA1663 protein associated to putative adhesion protein + Term 454 - 489 3.3 2 2 Tu 1 . - CDS 278 - 724 145 ## gi|313814751|gb|EFS52465.1| hypothetical protein HMPREF9589_02455 + Prom 439 - 498 4.2 3 3 Op 1 . + CDS 723 - 1001 217 ## HMPREF0675_4710 hypothetical protein 4 3 Op 2 . + CDS 916 - 1131 69 ## gi|313831142|gb|EFS68856.1| conserved domain protein + Term 1300 - 1347 -0.2 5 4 Op 1 . - CDS 1394 - 2227 452 ## COG3757 Lyzozyme M1 (1,4-beta-N-acetylmuramidase) 6 4 Op 2 . - CDS 2287 - 2442 67 ## gi|315100762|gb|EFT72738.1| hypothetical protein HMPREF9592_00216 - TRNA 2673 - 2757 65.7 # Leu TAG 0 0 - Term 2699 - 2732 0.1 7 5 Tu 1 . - CDS 2808 - 3293 538 ## COG1225 Peroxiredoxin + Prom 3204 - 3263 2.9 8 6 Tu 1 . + CDS 3377 - 3943 646 ## HMPREF0675_4706 hypothetical protein - Term 3954 - 4006 18.0 9 7 Op 1 38/0.000 - CDS 4017 - 4898 1093 ## COG0395 ABC-type sugar transport system, permease component 10 7 Op 2 35/0.000 - CDS 4895 - 5935 943 ## COG1175 ABC-type sugar transport systems, permease components - Term 5974 - 6025 1.1 11 7 Op 3 . - CDS 6092 - 7402 1405 ## COG1653 ABC-type sugar transport system, periplasmic component - Prom 7604 - 7663 2.0 - TRNA 7663 - 7738 78.8 # Lys CTT 0 0 - Term 7695 - 7742 2.0 12 8 Op 1 10/0.000 - CDS 7795 - 8523 653 ## COG3442 Predicted glutamine amidotransferase 13 8 Op 2 . - CDS 8520 - 9674 844 ## COG0769 UDP-N-acetylmuramyl tripeptide synthase 14 9 Tu 1 . + CDS 9592 - 9792 89 ## + Term 9936 - 9971 2.0 + Prom 9864 - 9923 1.7 15 10 Op 1 . + CDS 10009 - 10605 293 ## HMPREF0675_4697 hypothetical protein 16 10 Op 2 6/0.000 + CDS 10595 - 12187 900 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair 17 10 Op 3 . + CDS 12193 - 15597 1647 ## COG0587 DNA polymerase III, alpha subunit Predicted protein(s) >gi|302034469|gb|GL383166.1| GENE 1 81 - 338 243 85 aa, chain + ## HITS:1 COG:no KEGG:PPA1663 NR:ns ## KEGG: PPA1663 # Name: not_defined # Def: protein associated to putative adhesion protein # Organism: P.acnes # Pathway: not_defined # 1 83 45 127 188 158 98.0 5e-38 MSVQGNYLMSVVFPVAGWLAGLWGRTVGACENPAIKKRKIRIIGAVMATLTGLIMTIHEH FIAWRNYIPRDAIFSGKAVIIYVPH >gi|302034469|gb|GL383166.1| GENE 2 278 - 724 145 148 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313814751|gb|EFS52465.1| ## NR: gi|313814751|gb|EFS52465.1| hypothetical protein HMPREF9589_02455 [Propionibacterium acnes HL059PA1] hypothetical protein HMPREF9597_02325 [Propionibacterium acnes HL005PA4] hypothetical protein HMPREF9588_00503 [Propionibacterium acnes HL025PA2] # 1 148 21 168 168 296 100.0 4e-79 MGGHCGSFLVVVWESQASPNTVAARVSLFRVGHREAAVPAINHAIANIDRHNHNLISCPQ DEDFDISRIEEKNQAKACCNIKPGDHRGDHRYEHSHHCYATHPNDVSPVIMQDIGPDCAE HPPNHRENNQWGTYMITALPLKIASLGI >gi|302034469|gb|GL383166.1| GENE 3 723 - 1001 217 92 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4710 NR:ns ## KEGG: HMPREF0675_4710 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 87 1 87 87 121 86.0 1e-26 MRTHSKSNTAAPLNGLVIGAIIGVAMATFTSVLMFLIEFFLFADHVSFSGVKVATHPLPL VVFPFAGLALSIIGIRLKNSNAHLFSAWALLQ >gi|302034469|gb|GL383166.1| GENE 4 916 - 1131 69 71 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313831142|gb|EFS68856.1| ## NR: gi|313831142|gb|EFS68856.1| conserved domain protein [Propionibacterium acnes HL007PA1] conserved domain protein [Propionibacterium acnes HL045PA1] conserved domain protein [Propionibacterium acnes HL005PA2] conserved domain protein [Propionibacterium acnes HL092PA1] # 17 71 1 55 55 89 89.0 6e-17 MLGWLSVLLESGSRTVMPIYSQHGHYFSDHAVHGCGGVLSLLQDCPYILTLDGSHCFSEV CRWMRLYGHDS >gi|302034469|gb|GL383166.1| GENE 5 1394 - 2227 452 277 aa, chain - ## HITS:1 COG:AGc393 KEGG:ns NR:ns ## COG: AGc393 COG3757 # Protein_GI_number: 15887583 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lyzozyme M1 (1,4-beta-N-acetylmuramidase) # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 68 276 116 312 319 84 29.0 3e-16 MVSGMTVITFVPAAVAHASETQLPEESSSSSAPSSSDHAMGSQIKKHEHETAVTNRVQSL TIDTEPEGMDVSSHDGNVDWPAKVSSGMSFAWVKATEGTSYQNPFYASQYNGSQSAGLIR GAYHFALPSNSSGQAQATYFSDHGGGWSEDGYTLPGVVDLEYNPYGENACYGLSQTAMAS WIRDFVSTYQERWDRAPMIYTSTSWWNMCVGSAASDITAVAPLWIARYSSTVGELPSGWD AWTMWQYSNTGYDHDRMAGTREDLEKFATNETATPRH >gi|302034469|gb|GL383166.1| GENE 6 2287 - 2442 67 51 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|315100762|gb|EFT72738.1| ## NR: gi|315100762|gb|EFT72738.1| hypothetical protein HMPREF9592_00216 [Propionibacterium acnes HL046PA1] hypothetical protein HMPREF9581_01350 [Propionibacterium acnes HL087PA3] hypothetical protein HMPREF9579_01375 [Propionibacterium acnes HL087PA1] # 1 51 1 51 51 92 100.0 8e-18 MLRLTTPHPFPSTDSNWPKQVYERGGVVNLGVTLEGTIHASAPLPYTEASF >gi|302034469|gb|GL383166.1| GENE 7 2808 - 3293 538 161 aa, chain - ## HITS:1 COG:MT2597 KEGG:ns NR:ns ## COG: MT2597 COG1225 # Protein_GI_number: 15842053 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Mycobacterium tuberculosis CDC1551 # 2 159 4 157 157 176 57.0 2e-44 MSTRLQPGNAAPDFTLPAASGDHITLSDFTGKRVIVYFYPAAMTPGCTTQAVDFTAHLDE FEEAGYKVLGISPDPVAKLQKFVAKESLTLTLLSDEGKEVMKAYGAYGSKNVYGKEIVGV IRSTFVVDVAEDGSCKVTEAQYNVRAKGHVDKLCKELKIDC >gi|302034469|gb|GL383166.1| GENE 8 3377 - 3943 646 188 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4706 NR:ns ## KEGG: HMPREF0675_4706 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 188 1 188 188 199 98.0 4e-50 MADSKSKAKDERTADEIRRDIAATRARLAAGVENLVEEVHPATLKREASDRARDFVQGEF DQVKSQVKDENGWRVQRIAMAAGALAAGVVSIIVLRAIVGRATGATARRKLEKLQLSQAK RVRKDAKQRRKEDVKAAKKNAKLGKKNAKKYGKLDTDDSSVSNLAEKMLKQAAVLRAQAA AERENSAA >gi|302034469|gb|GL383166.1| GENE 9 4017 - 4898 1093 293 aa, chain - ## HITS:1 COG:Cgl0703 KEGG:ns NR:ns ## COG: Cgl0703 COG0395 # Protein_GI_number: 19551953 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Corynebacterium glutamicum # 20 293 3 277 278 263 50.0 3e-70 MSTVTATAPGTFDQETHHKKNTWAKVLPIIGIVLIVIYCLAPFYWILVSSLRPDSEIFDN TWWPAHPSMENYQAVFQPSNNFLRGLLNSLIVSVAVTVIALLIATFASYALARLDFRGKG GFLILIIATSMFPLVAIIVPLLKNFSAWHWINTYQAMIIPDLSFSLPLAVWNLTTFFKQM PDELEQAAMIDGCSPAQAFRKIILPLAAPGIFTTAIIVFIGAWNEFLVAVTMINDPEMEP ATVLLSKFTGASQFNSPFGSQMAAGVIMTVPLVIMVLVFQRRIVAGLAAGGIK >gi|302034469|gb|GL383166.1| GENE 10 4895 - 5935 943 346 aa, chain - ## HITS:1 COG:Cgl0704 KEGG:ns NR:ns ## COG: Cgl0704 COG1175 # Protein_GI_number: 19551954 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Corynebacterium glutamicum # 19 342 6 343 344 250 44.0 3e-66 MTTATVEQTNKRSSRAKSQERLALALIAPTLIVLTIVIVIPVIQSVKQTLYGQPGLDPET GFVNETEPFVGMKNFADIFTGSGERFWTAFWNTTLFGVVTVVLETILGVIMALIMHRAMA GRGIVRAAILVPWAIPTAVSAILWGWIFNQNGVANAIIGTHIMWASGNWTAKWSIIIADV WKTAPYIGLLTLAGLQVIPTEVYEAAKVDGANAWKRFVSITLPLVKPALVVAVLFRALDA LRMFDLPFILVGPRMKSVETLSMLVQDEASNLRYGAAAAYAIILFLYVFIIAFAFIKILG ADLVGDEHKYKKMKATTFVSGGRPGGRRARQKANAVQAAASKEAAS >gi|302034469|gb|GL383166.1| GENE 11 6092 - 7402 1405 436 aa, chain - ## HITS:1 COG:Cgl0706 KEGG:ns NR:ns ## COG: Cgl0706 COG1653 # Protein_GI_number: 19551956 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Corynebacterium glutamicum # 50 426 47 415 424 218 33.0 1e-56 MHYTHSRRAFIQGSVGALALSALAACSSGDSKGSESNKPAAKEGDFTGEGPISWVQGKDL SGGMVQKRLDEWNAKYPKEKVSLIELSSEADQQRQSLINAAQTNSAAYDVIGLDLVWVAE FAANRWIVEIPSDTKPVGVIDSVWETGSYRGKQYAVPYTTDAPIMYYRKDFLEQAKVEIP KTWEDVKKATEAVRKLPGMQNIGGFGGQWAKYEGLTCNIAEFINTCGGAIVDDSGKVTVD SPESIKGIQTAIDAFKSKLIPTAALEWKEEDSRNGFESGKVLFLRNWPYQYGNDLKELGP DKFGLAPLPSIDGKAYTPALGGHNCAITTNCKNKATALKFVKWWTSKESEQYNLEKQSNA PIYGELYTKDENVKKLPYLPTLKASLDAAKGRPHAVAYGDVTAAIQDAIYPALQGKTDAE SAAKQLAEKLKTIIKN >gi|302034469|gb|GL383166.1| GENE 12 7795 - 8523 653 242 aa, chain - ## HITS:1 COG:Cgl0246 KEGG:ns NR:ns ## COG: Cgl0246 COG3442 # Protein_GI_number: 19551496 # Func_class: R General function prediction only # Function: Predicted glutamine amidotransferase # Organism: Corynebacterium glutamicum # 8 234 6 249 250 174 47.0 1e-43 MNIDRPKIVLLYQSLLGIYGDHGNAVVLTKRLQWRGIDAELLIVEPGQPVPTDGAVYLLG GGEDTAQITAVQELEADGGLFTALDDGAMLFAVCAGYQICGKSFTIGARNEVIKGLGLLD AETRRGPERAVGEVLHIWTQSDSNTYPITGFENHGGWTELGSDAKPLAAVEIGWGNGNRR DEGAVQGRVIGTYPHGPVLVRNPQLADHVLEMALGRRLEPLDIPEMAALRQRRIEAVRTD RS >gi|302034469|gb|GL383166.1| GENE 13 8520 - 9674 844 384 aa, chain - ## HITS:1 COG:Cgl0247 KEGG:ns NR:ns ## COG: Cgl0247 COG0769 # Protein_GI_number: 19551497 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl tripeptide synthase # Organism: Corynebacterium glutamicum # 2 379 46 415 423 219 37.0 7e-57 MKLAPRALPELLAGRRIASVTGTNGKTTTTHFLTAAVRAGTSDSQRSVVTNADGANLHHG IVSALGQAPDATIAVLETDERVVADVVAMGSPEVLVLLNFSRDQLDRNHELTFLGRDWRV ALEKAAERGPTVVANACDPLIVWVCQKARHVIWVDTKPRWTADATLCPNCGAVLTHSDQG WDCPGCELQQPAADWWVEDHDAVEASGRRFHLDVQVPGSFNLTNATCALAAAIHMGIQPE DALRGIATVKSPAGRYATCTISGTRCRLLLSKNPAGWTESLPLTTSDPLVLAIDAVAADG KDVSWLWDVDYEQLAGRTVICAGPRALDLAVRLQYAEVKHIVIEDLSQALSSPLLAGKWD AEHPIDVLSTYTPFQKLRRLGGLA >gi|302034469|gb|GL383166.1| GENE 14 9592 - 9792 89 66 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVLPLVPVTLAMRRPAKSSGKALGASFIATRPRMDAPEPFPAMRETVAAVRPASRASCSC GELRCL >gi|302034469|gb|GL383166.1| GENE 15 10009 - 10605 293 198 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4697 NR:ns ## KEGG: HMPREF0675_4697 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 198 1 198 198 359 98.0 4e-98 MVDVDALVSRGVDGLEVPNGHAIHPLLQPLFPGGLMPAVYRLDGASSVGLGLLTHGWCGV VGLPELSVEAARQWGVELSRLVLVPDPGNWLETVATLIEGLDVVLAVAPPPLPITAGRRL TARLRSRGSTLVVLGPWPNPAARIDVRTIGWRGLGQGYGCLSAQELEVTVVRHHRNRSVR LVRTGAGVHSAKERADAC >gi|302034469|gb|GL383166.1| GENE 16 10595 - 12187 900 530 aa, chain + ## HITS:1 COG:Cgl0600 KEGG:ns NR:ns ## COG: Cgl0600 COG0389 # Protein_GI_number: 19551850 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Corynebacterium glutamicum # 19 527 6 526 526 157 29.0 5e-38 MLAERLSPFPVRVLLMVIPQWRIVAASRRHPGDAPLMIADRGVVIDCCARAAEEGVIPGL RVRAAQLRCPEGVVVPYDSASEEVLFDEVVREIEKSVAPSVHVVRPGVAAVAARGVARFY GDEVAAAERMVNVLTHIGYPHVGISVADGLFAAEVAPTDSSGEGKRGPVFLASGTSRAFL APYDVSVLARTGRADGELVRTLRQLGLTTMGAFADLDRQHVVQRFADAGQRAHDWARGMD VTMLSSRRPQDDDAMEVVFDDPEPSGAQVVAKVRPVVEEFMTRLAETGRVCSQARILLRA TTGFSEHTWRQPWQFSGDDLLGRLSRQLNDLPRVIDEFGADEFCQSGVQAVRIVPTIHRA GEAAEGLFGARPTEHLVHVISQLQERLGPEGVLVGEVAGGRMLKDRRRLVPFGTVVENAR PVDRPWPGHLDGPAPGIVYSRPLPARLETTDGMPLTTSSDLPTITPGWFHDGTLRRRVIA WAGPWPVRQRWWSTPTVSVERVQLITEDQQAWVLAGSADRWWIEARYDEA >gi|302034469|gb|GL383166.1| GENE 17 12193 - 15597 1647 1134 aa, chain + ## HITS:1 COG:MT3480 KEGG:ns NR:ns ## COG: MT3480 COG0587 # Protein_GI_number: 15842966 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit # Organism: Mycobacterium tuberculosis CDC1551 # 1 1134 8 1098 1098 975 51.0 0 MSYHNPPIPWRELEGRIFGRPAPHGHQESHADQVGYRHVRKPFDRHPVRPEGPVVPYAEL HCHSSYSFLDGASSPEDLVIRAVELGLSGLALTDHDGLYGVVRMAEAAEACGLSTIIGSE LSIGVPEPQNGVVDPMGSHLLVLANGPEGYRRLAEALTDAYLVEGGRKGRPVHDLDHLAE VADGHWTVLTGCRKGAVRQGLVRGMLQAEAELRRLVDLFGIDNVLVELTDHRAPTDSRDN DLLAELASRHSLLTVATTAAHYAGAEQFELACALSAVRARRSLDEMDGWLPPGPVARLRS GAEMADLFSRHRDAVDNTVSVAERTAFHLKSVRPRLPDQKVPDGHTPISWLRHLVEEGRR ACYGEDPVAKDRLATELNLIENRGFAGYFLIVSDIVEFAQSQGILCQGRGSAAASAVCYV LGITVVDPVFYGLPFERFLSVLREEEPDIDVDFDARRREEVIQYVYAKYGRRNAAQVADV ITYRPRSAVRDMAKALGYSQGQQDAWSRQMERRSVPPLPHDPDGSEIPDDVTTLAQQVMG LPRHLGIHSAGMVLTREPVGRICPIEPARMFGRTVLQWDKEDCAWMGLVKFDLLGLGMLS ALSISFDLISQHCGRFWTLASIPRNEPGVYDMLCRGDSIGVFQVESRAQIGALPRLKPRC FYDLAVEIGLIRPGPVQGGAVHPYIRRRTGAEPVTYPHPLLEPVLERTLGIPLFQEQLMQ MATTVGNCTAADADLLRRAMGSKRRVERIDSLCTKLFEGMAANGIDDDTAQGIYARIESF ANFGFAESHALSFAGLVYTSAWIKLHYPAVFLAALLRSQPMGFYSSATLVADARRHGVVT RRPDVARSSVGADLELLDACCEELGSEELETGIDECLHDHDESEIGAFDPNRDDGDHRRD THFAVRLGLSDVSGISIETATRIVEERERESFVSLDDLARRVDLSGEEVEALALAGAFDD LVGSRRGALWQIGQINGVAPGQLDVQVVTQPPLLPEPTQMELLGDDLRATSISTTDHPVR QVRDALNRRGVVQVDRLDGVEARRRIEVAGVVTHRQRPGTAGGVTFLNLEDETGLLNVIV TPGVWRHYRRVARASRALVVRGILERGNEGVMSLQADRLEALDLSVPTKSRDFR Prediction of potential genes in microbial genomes Time: Wed Jul 20 20:35:21 2011 Seq name: gi|302034468|gb|GL383167.1| Propionibacterium acnes HL005PA4 genomic scaffold Scfld45, whole genome shotgun sequence Length of sequence - 245993 bp Number of predicted genes - 248, with homology - 237 Number of transcription units - 131, operones - 55 average op.length - 3.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 23/0.000 - CDS 143 - 1228 934 ## COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit 2 1 Op 2 . - CDS 1230 - 3152 1541 ## COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit 3 2 Op 1 . + CDS 3350 - 3748 215 ## COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases 4 2 Op 2 . + CDS 3745 - 4329 187 ## HMPREF0675_4958 respiratory-chain NADH dehydrogenase, 30 Kd subunit 5 2 Op 3 . + CDS 4326 - 4634 211 ## HMPREF0675_4957 4Fe-4S binding domain protein 6 2 Op 4 . + CDS 4631 - 6211 972 ## HMPREF0675_4956 hypothetical protein 7 3 Tu 1 . + CDS 6308 - 7243 623 ## COG1024 Enoyl-CoA hydratase/carnithine racemase + Term 7477 - 7518 -0.8 8 4 Op 1 . - CDS 7245 - 8138 769 ## COG0708 Exonuclease III - Prom 8317 - 8376 68.6 + TRNA 8309 - 8390 53.9 # Tyr GTA 0 0 9 4 Op 2 . - CDS 8378 - 8587 60 ## - Prom 8748 - 8807 78.1 + TRNA 8593 - 8665 73.0 # Thr GGT 0 0 + TRNA 8731 - 8805 79.6 # Met CAT 0 0 + Prom 8733 - 8792 80.4 10 5 Op 1 . + CDS 8861 - 9031 309 ## PROTEIN SUPPORTED gi|50843349|ref|YP_056576.1| 50S ribosomal protein L33 + Term 9057 - 9108 7.0 11 5 Op 2 . + CDS 9161 - 9589 335 ## HMPREF0675_4949 hypothetical protein 12 5 Op 3 . + CDS 9586 - 10002 408 ## COG2030 Acyl dehydratase 13 5 Op 4 . + CDS 9999 - 11129 692 ## COG0812 UDP-N-acetylmuramate dehydrogenase + Term 11150 - 11209 5.9 14 6 Tu 1 . + CDS 11233 - 12498 1172 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs + Term 12533 - 12583 10.9 + TRNA 12782 - 12857 76.2 # Trp CCA 0 0 + Prom 12784 - 12843 79.2 15 7 Op 1 . + CDS 12948 - 13598 594 ## HMPREF0675_4944 preprotein translocase, SecE subunit 16 7 Op 2 45/0.000 + CDS 13622 - 14533 1007 ## COG0250 Transcription antiterminator + Term 14542 - 14571 -0.8 17 7 Op 3 55/0.000 + CDS 14663 - 15094 717 ## PROTEIN SUPPORTED gi|50843342|ref|YP_056569.1| 50S ribosomal protein L11 18 7 Op 4 43/0.000 + CDS 15184 - 15882 1163 ## PROTEIN SUPPORTED gi|213961485|ref|ZP_03389763.1| ribosomal protein L1 + Term 15892 - 15936 12.2 + Prom 16058 - 16117 2.9 19 8 Op 1 47/0.000 + CDS 16311 - 16925 988 ## PROTEIN SUPPORTED gi|213961499|ref|ZP_03389777.1| 50S ribosomal protein L10 20 8 Op 2 28/0.000 + CDS 16939 - 17331 623 ## PROTEIN SUPPORTED gi|50843339|ref|YP_056566.1| 50S ribosomal protein L7/L12 + Term 17546 - 17579 4.1 + Prom 17450 - 17509 2.6 21 8 Op 3 58/0.000 + CDS 17629 - 21108 880 ## PROTEIN SUPPORTED gi|163796927|ref|ZP_02190884.1| 30S ribosomal protein S12 22 8 Op 4 . + CDS 21277 - 25158 3846 ## COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit + Term 25179 - 25226 16.4 23 9 Tu 1 . + CDS 25397 - 26920 710 ## HMPREF0675_4936 actinobacterial surface-anchored protein domain protein + Term 26963 - 27030 3.6 24 10 Tu 1 . + CDS 27108 - 28121 569 ## PPA1880 putative adhesion or S-layer protein + Term 28152 - 28186 7.0 + Prom 28178 - 28237 2.7 25 11 Tu 1 . + CDS 28274 - 28804 362 ## HMPREF0675_4934 hypothetical protein + Term 28828 - 28891 1.6 + Prom 28857 - 28916 1.9 26 12 Op 1 56/0.000 + CDS 29068 - 29490 718 ## PROTEIN SUPPORTED gi|50840934|gb|AAT83601.1| 30S ribosomal protein S12 27 12 Op 2 51/0.000 + CDS 29494 - 29964 799 ## PROTEIN SUPPORTED gi|50843330|ref|YP_056557.1| 30S ribosomal protein S7 28 12 Op 3 . + CDS 30097 - 32190 2240 ## COG0480 Translation elongation factors (GTPases) 29 13 Tu 1 . - CDS 32201 - 32410 176 ## gi|314979727|gb|EFT23821.1| hypothetical protein HMPREF9573_00945 + Prom 32283 - 32342 5.0 30 14 Op 1 . + CDS 32409 - 33812 583 ## PPA1874 hypothetical protein 31 14 Op 2 . + CDS 33848 - 35668 1147 ## PPA1874 hypothetical protein - Term 35515 - 35553 0.8 32 15 Tu 1 . - CDS 35605 - 35934 116 ## HMPREF0675_4926 hypothetical protein + Prom 35805 - 35864 2.4 33 16 Tu 1 . + CDS 35980 - 37173 1411 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 34 17 Tu 1 . - CDS 37297 - 38865 733 ## COG4425 Predicted membrane protein 35 18 Tu 1 . + CDS 38939 - 39151 126 ## - Term 39105 - 39147 10.2 36 19 Op 1 . - CDS 39168 - 40847 1528 ## COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases 37 19 Op 2 . - CDS 40853 - 41110 191 ## PPA1871 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor (EC:3.1.4.16) 38 20 Tu 1 . - CDS 41213 - 42910 1476 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases 39 21 Op 1 . + CDS 42964 - 44457 1507 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases 40 21 Op 2 . + CDS 44532 - 46136 599 ## HMPREF0675_4920 hypothetical protein 41 22 Tu 1 . - CDS 46117 - 48033 827 ## COG0156 7-keto-8-aminopelargonate synthetase and related enzymes 42 23 Op 1 40/0.000 + CDS 48591 - 48902 525 ## PROTEIN SUPPORTED gi|50843319|ref|YP_056546.1| 30S ribosomal protein S10 43 23 Op 2 58/0.000 + CDS 48914 - 49585 1139 ## PROTEIN SUPPORTED gi|50843318|ref|YP_056545.1| 50S ribosomal protein L3 44 23 Op 3 61/0.000 + CDS 49582 - 50487 1546 ## PROTEIN SUPPORTED gi|213961379|ref|ZP_03389657.1| 50S ribosomal protein L4 45 23 Op 4 61/0.000 + CDS 50484 - 50792 504 ## PROTEIN SUPPORTED gi|50843316|ref|YP_056543.1| 50S ribosomal protein L23 46 23 Op 5 60/0.000 + CDS 50819 - 51655 1467 ## PROTEIN SUPPORTED gi|50843315|ref|YP_056542.1| 50S ribosomal protein L2 47 23 Op 6 59/0.000 + CDS 51671 - 51952 496 ## PROTEIN SUPPORTED gi|50843314|ref|YP_056541.1| 30S ribosomal protein S19 48 23 Op 7 61/0.000 + CDS 51970 - 52431 746 ## PROTEIN SUPPORTED gi|50843313|ref|YP_056540.1| 50S ribosomal protein L22 49 23 Op 8 50/0.000 + CDS 52433 - 53242 1372 ## PROTEIN SUPPORTED gi|50843312|ref|YP_056539.1| 30S ribosomal protein S3 50 23 Op 9 50/0.000 + CDS 53244 - 53663 740 ## PROTEIN SUPPORTED gi|50843311|ref|YP_056538.1| 50S ribosomal protein L16 51 23 Op 10 50/0.000 + CDS 53663 - 53896 376 ## PROTEIN SUPPORTED gi|50843310|ref|YP_056537.1| 50S ribosomal protein L29 52 23 Op 11 50/0.000 + CDS 53899 - 54171 452 ## PROTEIN SUPPORTED gi|50843309|ref|YP_056536.1| 30S ribosomal protein S17 + Term 54206 - 54245 10.5 + Prom 54649 - 54708 1.6 53 24 Op 1 57/0.000 + CDS 54768 - 55136 616 ## PROTEIN SUPPORTED gi|50843308|ref|YP_056535.1| 50S ribosomal protein L14 54 24 Op 2 48/0.000 + CDS 55137 - 55505 615 ## PROTEIN SUPPORTED gi|50843307|ref|YP_056534.1| 50S ribosomal protein L24 55 24 Op 3 50/0.000 + CDS 55502 - 56134 1084 ## PROTEIN SUPPORTED gi|213961424|ref|ZP_03389702.1| 50S ribosomal protein L5 56 24 Op 4 50/0.000 + CDS 56142 - 56327 331 ## PROTEIN SUPPORTED gi|50843305|ref|YP_056532.1| 30S ribosomal protein S14 57 24 Op 5 55/0.000 + CDS 56487 - 56894 683 ## PROTEIN SUPPORTED gi|50843304|ref|YP_056531.1| 30S ribosomal protein S8 58 24 Op 6 46/0.000 + CDS 56923 - 57465 921 ## PROTEIN SUPPORTED gi|50843303|ref|YP_056530.1| 50S ribosomal protein L6 59 24 Op 7 56/0.000 + CDS 57467 - 57850 615 ## PROTEIN SUPPORTED gi|50843302|ref|YP_056529.1| 50S ribosomal protein L18 60 24 Op 8 50/0.000 + CDS 57875 - 58522 1070 ## PROTEIN SUPPORTED gi|50843301|ref|YP_056528.1| 30S ribosomal protein S5 61 24 Op 9 48/0.000 + CDS 58522 - 58704 300 ## PROTEIN SUPPORTED gi|50843300|ref|YP_056527.1| 50S ribosomal protein L30 62 24 Op 10 . + CDS 58706 - 59146 752 ## PROTEIN SUPPORTED gi|50843299|ref|YP_056526.1| 50S ribosomal protein L15 - Term 59110 - 59148 1.3 63 25 Tu 1 . - CDS 59260 - 59493 117 ## + Prom 59222 - 59281 1.8 64 26 Op 1 . + CDS 59496 - 59666 65 ## HMPREF0675_4896 hypothetical protein 65 26 Op 2 . + CDS 59660 - 59908 272 ## HMPREF0675_4895 hypothetical protein + Term 59916 - 59963 11.2 66 27 Tu 1 . + CDS 60102 - 61805 1746 ## COG0747 ABC-type dipeptide transport system, periplasmic component + Term 61822 - 61879 11.0 67 28 Op 1 4/0.000 + CDS 61987 - 62673 456 ## COG0584 Glycerophosphoryl diester phosphodiesterase 68 28 Op 2 . + CDS 62687 - 64111 1052 ## COG0477 Permeases of the major facilitator superfamily 69 29 Tu 1 . - CDS 64101 - 64739 495 ## PPA1836 hypothetical protein + Prom 64779 - 64838 1.7 70 30 Op 1 28/0.000 + CDS 64909 - 66228 883 ## PROTEIN SUPPORTED gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 71 30 Op 2 12/0.000 + CDS 66225 - 66794 729 ## COG0563 Adenylate kinase and related kinases 72 30 Op 3 9/0.000 + CDS 66847 - 67635 595 ## COG0024 Methionine aminopeptidase 73 30 Op 4 . + CDS 67850 - 68071 320 ## PROTEIN SUPPORTED gi|15610598|ref|NP_217979.1| translation initiation factor IF-1 74 30 Op 5 . + CDS 68150 - 68263 203 ## PROTEIN SUPPORTED gi|50843287|ref|YP_056514.1| 50S ribosomal protein L36 75 31 Tu 1 . - CDS 68254 - 68643 66 ## HMPREF0675_4885 hypothetical protein 76 32 Op 1 48/0.000 + CDS 68642 - 69013 619 ## PROTEIN SUPPORTED gi|50843286|ref|YP_056513.1| 30S ribosomal protein S13 77 32 Op 2 36/0.000 + CDS 69085 - 69492 693 ## PROTEIN SUPPORTED gi|50843285|ref|YP_056512.1| 30S ribosomal protein S11 78 32 Op 3 26/0.000 + CDS 69523 - 70128 1034 ## PROTEIN SUPPORTED gi|50843284|ref|YP_056511.1| 30S ribosomal protein S4 + Term 70181 - 70220 -0.6 + Prom 70146 - 70205 2.0 79 32 Op 4 . + CDS 70374 - 71390 1110 ## COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit + Term 71495 - 71546 1.3 80 33 Tu 1 . - CDS 71289 - 71534 82 ## 81 34 Tu 1 . + CDS 71692 - 72228 893 ## PROTEIN SUPPORTED gi|50843282|ref|YP_056509.1| 50S ribosomal protein L17 + Term 72236 - 72285 14.5 82 35 Op 1 . + CDS 72338 - 73555 828 ## COG0438 Glycosyltransferase 83 35 Op 2 . + CDS 73555 - 74187 396 ## PPA1823 hypothetical protein 84 36 Tu 1 . - CDS 74203 - 75576 1087 ## COG0477 Permeases of the major facilitator superfamily 85 37 Tu 1 . - CDS 75912 - 77321 457 ## PPA1821 putative sialidase 86 38 Op 1 . - CDS 77550 - 81806 2608 ## COG1874 Beta-galactosidase 87 38 Op 2 . - CDS 81803 - 82312 323 ## COG1874 Beta-galactosidase 88 39 Tu 1 . + CDS 82295 - 82528 57 ## 89 40 Tu 1 . - CDS 82559 - 83176 384 ## PROTEIN SUPPORTED gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent + Prom 83594 - 83653 3.3 90 41 Op 1 . + CDS 83739 - 84005 98 ## gi|315093722|gb|EFT65698.1| hypothetical protein HMPREF9582_01740 91 41 Op 2 . + CDS 84058 - 84900 568 ## COG1131 ABC-type multidrug transport system, ATPase component 92 41 Op 3 . + CDS 84882 - 86495 1112 ## PPA1816 ABC transporter associated permease + Term 86500 - 86545 8.3 93 42 Tu 1 . + CDS 86588 - 87349 192 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 94 43 Op 1 . - CDS 87402 - 88163 455 ## HMPREF0675_4871 hypothetical protein 95 43 Op 2 34/0.000 - CDS 88160 - 89815 918 ## COG1122 ABC-type cobalt transport system, ATPase component 96 43 Op 3 . - CDS 89812 - 90831 549 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters + Prom 90740 - 90799 2.4 97 44 Tu 1 . + CDS 90947 - 91162 87 ## gi|313793307|gb|EFS41365.1| hypothetical protein HMPREF9575_00836 98 45 Op 1 . - CDS 91143 - 91763 291 ## COG2813 16S RNA G1207 methylase RsmC 99 45 Op 2 . - CDS 91760 - 92599 551 ## COG0101 Pseudouridylate synthase 100 45 Op 3 . - CDS 92596 - 93426 586 ## COG0220 Predicted S-adenosylmethionine-dependent methyltransferase - Prom 93524 - 93583 2.5 + Prom 93507 - 93566 2.0 101 46 Tu 1 . + CDS 93728 - 94006 140 ## PPA1807 hypothetical protein 102 47 Tu 1 . - CDS 94126 - 95031 693 ## PPA1806 hypothetical protein - Prom 95054 - 95113 2.1 + Prom 95018 - 95077 2.7 103 48 Op 1 . + CDS 95182 - 97338 1104 ## COG4724 Endo-beta-N-acetylglucosaminidase D 104 48 Op 2 . + CDS 97335 - 97907 145 ## PPA1805 endo-beta-N-acetylglucosaminidase family protein 105 48 Op 3 . + CDS 97838 - 98422 175 ## HMPREF0675_4862 hypothetical protein + Prom 98440 - 98499 3.3 106 49 Op 1 59/0.000 + CDS 98644 - 99129 764 ## PROTEIN SUPPORTED gi|213961349|ref|ZP_03389627.1| ribosomal protein L13 107 49 Op 2 4/0.000 + CDS 99152 - 99673 880 ## PROTEIN SUPPORTED gi|213961461|ref|ZP_03389739.1| ribosomal protein S9 + Term 99692 - 99742 20.2 108 50 Tu 1 . + CDS 99900 - 101252 1225 ## COG1109 Phosphomannomutase 109 51 Tu 1 . + CDS 101364 - 102011 407 ## HMPREF0675_4858 hypothetical protein 110 52 Tu 1 . - CDS 102056 - 103039 854 ## COG1072 Panthothenate kinase 111 53 Tu 1 . - CDS 103170 - 104183 813 ## COG1075 Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold 112 54 Tu 1 . + CDS 104089 - 104328 112 ## gi|282855140|ref|ZP_06264472.1| hypothetical protein HMPREF9206_0375 - Term 104250 - 104292 11.1 113 55 Tu 1 . - CDS 104318 - 105337 825 ## COG1075 Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold 114 56 Tu 1 . + CDS 105513 - 107360 1603 ## COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains 115 57 Tu 1 . - CDS 107347 - 107565 100 ## 116 58 Op 1 1/0.050 + CDS 107470 - 107817 278 ## COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) 117 58 Op 2 . + CDS 107908 - 109353 415 ## PROTEIN SUPPORTED gi|225086616|ref|YP_002657886.1| ribosomal protein S15 + Term 109502 - 109546 1.3 118 59 Tu 1 . - CDS 109397 - 110536 681 ## COG0438 Glycosyltransferase - Prom 110673 - 110732 3.6 119 60 Tu 1 . - CDS 110907 - 111131 62 ## + Prom 110997 - 111056 1.6 120 61 Op 1 . + CDS 111130 - 111825 302 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 121 61 Op 2 . + CDS 111825 - 114164 1036 ## PPA1789 putative ABC transporter-associated permease + Term 114182 - 114216 -1.0 122 62 Tu 1 . + CDS 114516 - 116618 1583 ## COG0513 Superfamily II DNA and RNA helicases - Term 116580 - 116609 -0.7 123 63 Tu 1 . - CDS 116628 - 117341 274 ## HMPREF0675_4843 hypothetical protein + Prom 117343 - 117402 1.8 124 64 Op 1 12/0.000 + CDS 117520 - 118413 820 ## COG0802 Predicted ATPase or kinase 125 64 Op 2 20/0.000 + CDS 118413 - 119072 296 ## PROTEIN SUPPORTED gi|15827107|ref|NP_301370.1| putative acetyltransferase 126 64 Op 3 9/0.000 + CDS 119069 - 119539 213 ## PROTEIN SUPPORTED gi|227881166|ref|ZP_03999028.1| (SSU ribosomal protein S18P)-alanine acetyltransferase 127 64 Op 4 . + CDS 119532 - 120575 717 ## PROTEIN SUPPORTED gi|229232313|ref|ZP_04356740.1| (SSU ribosomal protein S18P)-alanine acetyltransferase 128 65 Tu 1 . + CDS 120689 - 121180 509 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes + Term 121231 - 121270 1.0 + Prom 121198 - 121257 1.7 129 66 Op 1 33/0.000 + CDS 121306 - 122475 1004 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 130 66 Op 2 35/0.000 + CDS 122498 - 123577 869 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 131 66 Op 3 . + CDS 123574 - 124326 185 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 + Term 124547 - 124588 0.8 132 67 Tu 1 . + CDS 124600 - 124764 57 ## 133 68 Op 1 . + CDS 125035 - 126234 573 ## COG0500 SAM-dependent methyltransferases 134 68 Op 2 . + CDS 126239 - 127033 312 ## HMPREF0675_4832 hypothetical protein 135 69 Tu 1 . + CDS 127158 - 128156 448 ## PPA1774 hypothetical protein + Term 128194 - 128234 -0.8 + Prom 128170 - 128229 1.5 136 70 Op 1 41/0.000 + CDS 128387 - 128683 400 ## COG0234 Co-chaperonin GroES (HSP10) 137 70 Op 2 . + CDS 128695 - 130290 1499 ## PROTEIN SUPPORTED gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 + Term 130300 - 130351 15.9 138 71 Tu 1 . + CDS 130629 - 131198 381 ## PPA1771 hypothetical protein + Term 131228 - 131273 14.0 139 72 Op 1 . - CDS 131153 - 131365 115 ## 140 72 Op 2 . - CDS 131448 - 133202 699 ## PROTEIN SUPPORTED gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 141 73 Op 1 . + CDS 133569 - 135011 632 ## HMPREF0675_4826 hypothetical protein 142 73 Op 2 6/0.000 + CDS 135109 - 136623 1331 ## COG0516 IMP dehydrogenase/GMP reductase 143 73 Op 3 . + CDS 136657 - 137760 1093 ## COG0516 IMP dehydrogenase/GMP reductase 144 73 Op 4 . + CDS 137818 - 138165 348 ## COG1605 Chorismate mutase 145 74 Tu 1 . - CDS 138174 - 138746 585 ## COG1045 Serine acetyltransferase 146 75 Tu 1 . + CDS 138943 - 140496 1283 ## COG0519 GMP synthase, PP-ATPase domain/subunit + Term 140515 - 140566 11.1 147 76 Tu 1 . - CDS 140762 - 141046 328 ## COG1983 Putative stress-responsive transcriptional regulator - Prom 141096 - 141155 1.7 - Term 141118 - 141155 3.3 148 77 Tu 1 . - CDS 141279 - 141542 406 ## HMPREF0675_4818 hypothetical protein - Prom 141605 - 141664 4.5 149 78 Op 1 . - CDS 141689 - 142951 864 ## COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes 150 78 Op 2 32/0.000 - CDS 143048 - 143701 793 ## COG2011 ABC-type metal ion transport system, permease component 151 78 Op 3 10/0.000 - CDS 143701 - 144798 864 ## COG1135 ABC-type metal ion transport system, ATPase component 152 78 Op 4 . - CDS 144830 - 145792 1132 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen 153 79 Tu 1 . + CDS 146239 - 148671 1422 ## COG0210 Superfamily I DNA and RNA helicases 154 80 Op 1 39/0.000 + CDS 148898 - 150073 1238 ## COG0045 Succinyl-CoA synthetase, beta subunit 155 80 Op 2 . + CDS 150077 - 150970 1114 ## COG0074 Succinyl-CoA synthetase, alpha subunit 156 81 Tu 1 . + CDS 151120 - 152613 682 ## HMPREF0675_4808 hypothetical protein 157 82 Op 1 16/0.000 + CDS 152899 - 153894 470 ## COG1985 Pyrimidine reductase, riboflavin biosynthesis 158 82 Op 2 15/0.000 + CDS 153887 - 154501 427 ## COG0307 Riboflavin synthase alpha chain 159 82 Op 3 18/0.000 + CDS 154495 - 155811 935 ## COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase 160 82 Op 4 . + CDS 155808 - 156308 386 ## COG0054 Riboflavin synthase beta-chain 161 82 Op 5 10/0.000 + CDS 156333 - 156956 536 ## COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN 162 82 Op 6 . + CDS 156953 - 158503 1369 ## COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) + Term 158677 - 158713 1.7 163 83 Op 1 . - CDS 158582 - 159208 331 ## PPA1746 hypothetical protein 164 83 Op 2 . - CDS 159220 - 161646 1915 ## PPA1745 hypothetical protein 165 84 Op 1 . + CDS 161645 - 161824 57 ## gi|313830195|gb|EFS67909.1| hypothetical protein HMPREF9616_02360 166 84 Op 2 . + CDS 161846 - 162841 353 ## PPA1744 hypothetical protein 167 84 Op 3 . + CDS 162856 - 163719 625 ## COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 168 84 Op 4 . + CDS 163716 - 164054 131 ## PPA1742 hypothetical protein 169 85 Tu 1 . - CDS 164129 - 165472 838 ## PROTEIN SUPPORTED gi|148544941|ref|YP_001272311.1| 50S ribosomal protein L29P - Prom 165715 - 165774 3.2 - Term 165744 - 165778 2.7 170 86 Tu 1 . - CDS 165900 - 166883 1092 ## COG0039 Malate/lactate dehydrogenases 171 87 Tu 1 . - CDS 167062 - 167913 539 ## COG0788 Formyltetrahydrofolate hydrolase 172 88 Tu 1 . + CDS 168109 - 170313 1910 ## COG2838 Monomeric isocitrate dehydrogenase + Term 170351 - 170395 6.6 173 89 Tu 1 . + CDS 170523 - 171458 462 ## PPA1737 hypothetical protein + Term 171472 - 171506 1.3 174 90 Op 1 . + CDS 171586 - 172992 996 ## COG1253 Hemolysins and related proteins containing CBS domains 175 90 Op 2 . + CDS 172989 - 174230 583 ## HMPREF0675_4789 hypothetical protein 176 91 Tu 1 . + CDS 174366 - 175556 1192 ## COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein 177 92 Tu 1 . - CDS 175580 - 175804 64 ## HMPREF0675_4786 hypothetical protein 178 93 Op 1 24/0.000 + CDS 175692 - 177281 1396 ## COG3845 ABC-type uncharacterized transport systems, ATPase components 179 93 Op 2 26/0.000 + CDS 177278 - 178549 1395 ## COG4603 ABC-type uncharacterized transport system, permease component 180 93 Op 3 3/0.000 + CDS 178546 - 179904 1134 ## COG1079 Uncharacterized ABC-type transport system, permease component 181 93 Op 4 . + CDS 179879 - 180319 203 ## COG0295 Cytidine deaminase 182 93 Op 5 . + CDS 180316 - 181218 503 ## COG0328 Ribonuclease HI 183 94 Tu 1 . + CDS 181328 - 183106 1552 ## COG0143 Methionyl-tRNA synthetase 184 95 Op 1 4/0.000 - CDS 183108 - 183740 415 ## COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases - Prom 183955 - 184014 1.8 185 95 Op 2 . - CDS 184030 - 185682 1186 ## COG0477 Permeases of the major facilitator superfamily 186 95 Op 3 . - CDS 185763 - 186344 264 ## PPA1725 putative uridine kinase (EC:2.7.1.48) 187 96 Tu 1 . + CDS 186599 - 188272 1353 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 188 97 Op 1 3/0.000 - CDS 188304 - 189980 1340 ## COG1109 Phosphomannomutase 189 97 Op 2 . - CDS 190007 - 190819 735 ## COG0005 Purine nucleoside phosphorylase 190 98 Tu 1 . + CDS 190728 - 190898 117 ## 191 99 Tu 1 . + CDS 191008 - 192387 571 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 192 100 Op 1 . - CDS 192426 - 193148 617 ## HMPREF0675_4773 hypothetical protein 193 100 Op 2 . - CDS 193205 - 194974 1288 ## COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit 194 101 Op 1 . + CDS 195229 - 195741 228 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 195 101 Op 2 . + CDS 195738 - 196736 650 ## COG0598 Mg2+ and Co2+ transporters 196 102 Tu 1 . - CDS 196937 - 198343 751 ## PPA1715 hypothetical protein - Prom 198467 - 198526 6.3 197 103 Op 1 . + CDS 199075 - 199545 491 ## COG0471 Di- and tricarboxylate transporters 198 103 Op 2 . + CDS 199524 - 200384 604 ## COG0471 Di- and tricarboxylate transporters 199 104 Tu 1 . + CDS 200504 - 201307 795 ## COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 200 105 Tu 1 . - CDS 201411 - 202145 430 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 201 106 Tu 1 . + CDS 202342 - 202761 251 ## HMPREF0675_4763 hypothetical protein + Term 202839 - 202873 0.0 + Prom 202825 - 202884 2.3 202 107 Tu 1 . + CDS 202907 - 203122 123 ## 203 108 Op 1 . - CDS 203336 - 203929 379 ## COG0424 Nucleotide-binding protein implicated in inhibition of septum formation 204 108 Op 2 . - CDS 203979 - 204194 274 ## PPA1708 hypothetical protein 205 108 Op 3 . - CDS 204206 - 205780 1546 ## COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) - Term 205799 - 205839 -0.9 206 108 Op 4 . - CDS 205873 - 206244 345 ## HMPREF0675_4758 hypothetical protein + Prom 206259 - 206318 3.6 207 109 Op 1 . + CDS 206499 - 207215 558 ## COG0340 Biotin-(acetyl-CoA carboxylase) ligase 208 109 Op 2 . + CDS 207263 - 207979 575 ## COG3340 Peptidase E 209 110 Tu 1 . - CDS 207966 - 208496 348 ## PPA1703 hypothetical protein 210 111 Op 1 29/0.000 + CDS 208603 - 209775 960 ## COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) 211 111 Op 2 . + CDS 209768 - 210358 509 ## COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase - Term 210325 - 210366 -0.0 212 112 Op 1 . - CDS 210419 - 212380 1050 ## COG3250 Beta-galactosidase/beta-glucuronidase 213 112 Op 2 . - CDS 212356 - 213375 636 ## COG3250 Beta-galactosidase/beta-glucuronidase 214 113 Tu 1 . - CDS 213595 - 214515 622 ## COG1316 Transcriptional regulator 215 114 Tu 1 . + CDS 214692 - 214880 56 ## gi|314967369|gb|EFT11468.1| hypothetical protein HMPREF9619_00026 + Prom 214924 - 214983 2.2 216 115 Tu 1 . + CDS 215095 - 216006 767 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 217 116 Tu 1 . - CDS 216009 - 216740 370 ## PPA1697 hypothetical protein 218 117 Op 1 . + CDS 216808 - 217884 667 ## COG0836 Mannose-1-phosphate guanylyltransferase 219 117 Op 2 . + CDS 217881 - 218576 286 ## PPA1695 hypothetical protein + Term 218632 - 218660 -0.3 220 118 Tu 1 . + CDS 218753 - 219010 338 ## HMPREF0675_4744 transcription factor WhiB 221 119 Op 1 . + CDS 219159 - 222488 1773 ## PPA1693 putative glycosyl transferase 222 119 Op 2 . + CDS 222485 - 223987 658 ## PPA1692 hypothetical protein + Term 223994 - 224030 -0.9 223 120 Tu 1 . - CDS 223993 - 224412 237 ## PPA1691 hypothetical protein 224 121 Op 1 . + CDS 224512 - 224919 144 ## PPA1690 hypothetical protein 225 121 Op 2 . + CDS 224929 - 225207 168 ## PPA1689 hypothetical protein 226 121 Op 3 . + CDS 225204 - 226223 488 ## PPA1688 hypothetical protein 227 121 Op 4 . + CDS 226220 - 227251 1042 ## COG0053 Predicted Co/Zn/Cd cation transporters 228 121 Op 5 . + CDS 227248 - 227679 385 ## COG0757 3-dehydroquinate dehydratase II + Term 227802 - 227845 0.3 229 122 Tu 1 . - CDS 227704 - 227946 208 ## PPA1685 hypothetical protein 230 123 Op 1 . + CDS 228308 - 229129 503 ## PPA1684 hypothetical protein 231 123 Op 2 . + CDS 229220 - 231328 1359 ## COG1640 4-alpha-glucanotransferase - Term 231355 - 231400 14.2 232 124 Op 1 . - CDS 231433 - 231708 460 ## COG0776 Bacterial nucleoid DNA-binding protein - Prom 231762 - 231821 1.7 233 124 Op 2 . - CDS 231901 - 233241 1251 ## COG1488 Nicotinic acid phosphoribosyltransferase 234 125 Tu 1 . + CDS 233328 - 233615 251 ## COG2127 Uncharacterized conserved protein 235 126 Tu 1 . + CDS 233806 - 234171 311 ## HMPREF0675_4729 hypothetical protein + Term 234253 - 234292 0.4 236 127 Op 1 . - CDS 234175 - 234717 272 ## PPA1678 hypothetical protein 237 127 Op 2 . - CDS 234717 - 236681 1685 ## COG0370 Fe2+ transport system protein B 238 127 Op 3 . - CDS 236742 - 237071 197 ## PPA1676 ferrous iron transport protein A - Prom 237158 - 237217 3.9 239 128 Op 1 2/0.000 + CDS 237243 - 238097 515 ## COG0796 Glutamate racemase 240 128 Op 2 8/0.000 + CDS 238137 - 238895 703 ## COG0689 RNase PH 241 128 Op 3 . + CDS 238892 - 239506 395 ## PROTEIN SUPPORTED gi|74313511|ref|YP_311930.1| putative deoxyribonucleotide triphosphate pyrophosphatase 242 128 Op 4 16/0.000 + CDS 239507 - 240316 708 ## COG0207 Thymidylate synthase 243 128 Op 5 . + CDS 240276 - 240830 488 ## COG0262 Dihydrofolate reductase 244 128 Op 6 . + CDS 240860 - 242224 797 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair 245 129 Op 1 . - CDS 242276 - 243964 1544 ## COG1073 Hydrolases of the alpha/beta superfamily 246 129 Op 2 . - CDS 243961 - 244188 182 ## PPA1669 membrane-spanning protein - Prom 244266 - 244325 2.4 + Prom 244259 - 244318 3.9 247 130 Tu 1 . + CDS 244561 - 245349 281 ## COG1737 Transcriptional regulators + Term 245376 - 245430 -0.9 248 131 Tu 1 . - CDS 245617 - 245844 85 ## HMPREF0675_4715 hypothetical protein - Prom 245876 - 245935 2.5 Predicted protein(s) >gi|302034468|gb|GL383167.1| GENE 1 143 - 1228 934 361 aa, chain - ## HITS:1 COG:Rv2454c KEGG:ns NR:ns ## COG: Rv2454c COG1013 # Protein_GI_number: 15609591 # Func_class: C Energy production and conversion # Function: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit # Organism: Mycobacterium tuberculosis H37Rv # 14 359 33 372 373 419 60.0 1e-117 MTDITTEDRPAGLADVPLAIEPLKRRDFASDQEVRWCPGCGDYAILSTFQGVLPNLGIAK ENAVVISGIGCSSRFPYYMNTYGMHSIHGRAPAIATGVAVSRPDLAVFVITGDGDALSIG GNHLIHAMRRNVNLTILMFNNRIYGLTKGQYSPTSEAGKVTKSSPMGSIDAPFNPLAVAL GAGCSFVARAVDSDRKHLAQVLTAAAKHRGTSFVEMYQNCPIFNDGAFDDYKGPEATQHL IRLVDGEPVLVGADNSRGVVRDPVSGELTVADVAEVGMDHVLVHDSHRADPSLAFELAHL DDGTVVTQTPVGIFYDVDRPTYDDQARAQVKLASGDATDPGSRNAALQQLLLGSDTWQVQ S >gi|302034468|gb|GL383167.1| GENE 2 1230 - 3152 1541 640 aa, chain - ## HITS:1 COG:MT2530_2 KEGG:ns NR:ns ## COG: MT2530_2 COG0674 # Protein_GI_number: 15841979 # Func_class: C Energy production and conversion # Function: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit # Organism: Mycobacterium tuberculosis CDC1551 # 222 626 1 391 425 464 60.0 1e-130 MPSTDTAHHTTDEREVQPLDRVVIRFAGDSGDGMQLTGDRFTAESAIHGNDISTLPNFPA EIRAPQGTIPGVSSFQVHFANYDIATPGDQPDVLVVMNPAALAANLGDIRRGGLIILDSA EFTAKNLKKAGYTEDPRNDGTLESYQVVELNLTGLAVAAVEPFNLGRKNSERAKNMFALG LLTWLYGRPLGPSEKFLASKFASKPDIRDANFAALKAGHAYGETCELFRVRYEVAPAPMP EGTYRQVTGNLATAYGLITGANRAGLQLFLGSYPITPASDILHELSKRKAHNVVTFQAED EIAGVSSAIGASFSGSLGVTTTSGPGMSLKSEAIGLAVMTELPLVVVDVQRAGPSTGMPT KPEQADLLQAMFGRNGESPVPVLAAKSPSDCFDTALEACRIAVTYRTPVIMLSDGYLGNG AEPWKVPDLAEIPRIDPHFATEPNTTAADGSPRFMPYRRDPQTLARPWALPGTKGLEHRV GGLEKSAHTGAISYDPANHEEMVATRAAKVKGIAKTIPPTAVDDPSGDADVLVLGWGSAY GPITAAVRRVRARGLSIAQAHVRHLNPLPEDLGDVLRRYRQIVVPEMNTGQFAMLLRSKY LIDVKTISRVRGLPISPVDLCDELCRHCGDSKGSDDTREA >gi|302034468|gb|GL383167.1| GENE 3 3350 - 3748 215 132 aa, chain + ## HITS:1 COG:Ta0969m KEGG:ns NR:ns ## COG: Ta0969m COG0377 # Protein_GI_number: 16082574 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases # Organism: Thermoplasma acidophilum # 4 122 20 141 157 69 34.0 1e-12 MKFIDWFADGSVYVVDLALACCGVESGAAVLANAPVREEIPDGAPIVVLVSGTVTTGLAP VVSDTVHELKRNHPVDVVAFGACACAGGPYWDSAGVVAGLPDAGVDADHWIPGCPPGPET LTGLLASSREAA >gi|302034468|gb|GL383167.1| GENE 4 3745 - 4329 187 194 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4958 NR:ns ## KEGG: HMPREF0675_4958 # Name: not_defined # Def: respiratory-chain NADH dehydrogenase, 30 Kd subunit # Organism: P.acnes_SK137 # Pathway: Oxidative phosphorylation [PATH:pak00190]; Metabolic pathways [PATH:pak01100] # 1 194 1 194 194 346 100.0 4e-94 MTTSDVPAIGWHDAVAQAVSTHPWLAHLTAIDGTGERGQDPDIIVVCRLENHDGDDVTIS TRVPRDGGTLDSIVGVLAGASWYQREIHDFFGVRFVGPGADDRALLVHDAPKPPLRKEAV LAQRADTVWPGAADQAGSKSASRRLPVGVPDPETWRRIKDGEDIPDAEVIAAMSGRRPRS AARRMASTASGRQA >gi|302034468|gb|GL383167.1| GENE 5 4326 - 4634 211 102 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4957 NR:ns ## KEGG: HMPREF0675_4957 # Name: not_defined # Def: 4Fe-4S binding domain protein # Organism: P.acnes_SK137 # Pathway: Oxidative phosphorylation [PATH:pak00190]; Metabolic pathways [PATH:pak01100] # 1 102 1 102 102 181 100.0 1e-44 MRHSAINLDVDACTSCMICARECPAWCITIDAHHEAVPDCDARRPRTVAVLDEFAIDWGL CMYCGMCIESCPFDALSWSDKRVSESLSRTDLVSAWGLDGDR >gi|302034468|gb|GL383167.1| GENE 6 4631 - 6211 972 526 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4956 NR:ns ## KEGG: HMPREF0675_4956 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 526 1 526 526 919 99.0 0 MKQPVGRRRRIRWLAYVRAWRSWSVLEGLVGTILITAGSLTPAYLPLNSPWWSRLNEAGL RGSTWRIVGTLLVLVGVGLLVDSWLRLRPGREPRDLTAEPLPKHARRCFKHLPGIRAGLH PWAVLGVWGLPFLLAPPIFSHDAYSYAAQGWLLENGISPYEGYPGLLPGAFADQVAQEWR YTKTPYGPLALVVQHGIVHLTGDNPYWSSVFMRVPALLGVIAIGLLLSRVARRVGRDPHF AAWFSTLNPILVVDFIGGAHNDALMMGLVVIGLWIACMTSWSWAIGAVLVGGAAAVKQPA FMVAVALPLIRHPMASWHPRHLFPALGRTVGSLTISVAVFSGISWASGLGFGWYHAVNVP GMVLTVSPFTLVGMGVRMVLGSFGAHQAAAAVIPISQAIGMLVGVFLLVVMAVRLLPCKP LSFLALGFLAVALCAPALHSWYVLWGALLLPLIDEAARFVRPAVWTTVIMLSFDAVNLSW RNSAAALGVALVLVLAARLVWHEHSLGQGWTHKDVHVPHPTRSIDC >gi|302034468|gb|GL383167.1| GENE 7 6308 - 7243 623 311 aa, chain + ## HITS:1 COG:ML2401 KEGG:ns NR:ns ## COG: ML2401 COG1024 # Protein_GI_number: 15828291 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Mycobacterium leprae # 14 310 19 338 345 142 34.0 7e-34 MDEVKISGTDDVTIILDRPRAINSLSGEMLGAIGEAVKGSPRSIDLSGAGERGYCSGADI RELRSLVLKDPEAAGDWLDGEYDVDAAIAEVHSGTAHLHGISMGGGLGLALRLKRVEARD DLVLAMPETGIGLWPDVGACFELSRAPRLVGRHIAMTGAFIDAASALWAGLVDEVVDADG EPVDVDPVACQLARDAVWIQECYDTDDPVEVCRRLADRPEPAARKTAEHIATRCPLSVAV ALAAVVRAESASGLGEVLETDRALGRSFMRNSDFCEGVRAQLVDKDRNPHWSHESVADVP ARQVEGMFDPS >gi|302034468|gb|GL383167.1| GENE 8 7245 - 8138 769 297 aa, chain - ## HITS:1 COG:NMA0348 KEGG:ns NR:ns ## COG: NMA0348 COG0708 # Protein_GI_number: 15793359 # Func_class: L Replication, recombination and repair # Function: Exonuclease III # Organism: Neisseria meningitidis Z2491 # 1 296 2 255 259 187 37.0 1e-47 MRIASFNINGIRAALKRGFSERMEARDCDVIGLQEVRCRPADLPEGAFGDRHVSWAPGSL AGRNGVALLTRTAPAEVRSWGTHLVMAPGQAPTPAQALTGNTDGLPTELLPFADEGRYIE VDLADTPLTVACLYLPKGATPDPANEKTIAKQDRKMAFLTGFRDHLVRRRQECTTQGRHF LVMGDFNIAHENADLKNWKANQRNEGFLPEERQWFDTILSPDTLIDVVRAQHPDTNGPYS WWSWRGKAFVNDAGWRIDYHLASPELASKAITAEIDRDPSYSERTSDHAAVVVDYDL >gi|302034468|gb|GL383167.1| GENE 9 8378 - 8587 60 69 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRKLHELSTVGKSEPESPQPPGLNPETGFQSNRAVPPHHISNRPMSARDPVMAKPTPESI RPGGLQLAS >gi|302034468|gb|GL383167.1| GENE 10 8861 - 9031 309 56 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843349|ref|YP_056576.1| 50S ribosomal protein L33 [Propionibacterium acnes KPA171202] # 1 56 1 56 56 123 100 6e-27 MAKKSGDVRPKITLACTECKERNYITKKNRRNNPDRMEMAKFCPRCRKHTAHRETR >gi|302034468|gb|GL383167.1| GENE 11 9161 - 9589 335 142 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4949 NR:ns ## KEGG: HMPREF0675_4949 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 142 1 142 142 271 100.0 9e-72 MSISSHDVGRTYPTTDPYLVTAEKIRELATALGDNAPAYRGDDPIAPPTFAMVLASRAWE ALFDDEQLDLRLEHMIHTDQSFHWIRPLHEGDEVTAALTITSVRTRGNTDIIGINVSLDH VDGEHLGNATSTLWHTRPEGNA >gi|302034468|gb|GL383167.1| GENE 12 9586 - 10002 408 138 aa, chain + ## HITS:1 COG:ML1909 KEGG:ns NR:ns ## COG: ML1909 COG2030 # Protein_GI_number: 15828023 # Func_class: I Lipid transport and metabolism # Function: Acyl dehydratase # Organism: Mycobacterium leprae # 18 128 22 134 142 85 41.0 2e-17 MSVQLSEGQTFGPRAINVTRTTLVRYAGASGDFNPIHYSDRAAREAGMDGVIAHGMWTMG AALGTVIDWVGGPERVVSQRARFTRPVQVPDTEGGTAIEVAATVRKVSEEAATLAVDVKC DGQSVLGRVEVVVRQGEQ >gi|302034468|gb|GL383167.1| GENE 13 9999 - 11129 692 376 aa, chain + ## HITS:1 COG:MT0500 KEGG:ns NR:ns ## COG: MT0500 COG0812 # Protein_GI_number: 15839872 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate dehydrogenase # Organism: Mycobacterium tuberculosis CDC1551 # 35 376 16 369 369 289 50.0 5e-78 MSTTVIGPYEDDDPTEACSTIHHEVIGTTTCLSGGEDVPLAPLTTLKVGGPARHLVIATT HDELLATVRDCDRRGEPCLVLGGGSNVLVGDNGFDGTVVRVATSGLSAEVSSCGGALVTV AAGQVWDDFVVHAIEQEWIGPEFLSGIPGLVGSTPIQNVGAYGVEVGEFIARVRTWDRVD DTQRTFTADQCDFGYRSSRFKAEPDRYVVLDVTMQFNLGTRSLPVRYAELARRLGVEPGE RVDTSQVRETVLAVRAGKGMVLNPNDHDTWSAGSFFTNPLVSPDQVPEGAPAFAQSDGRV KTSAAWLIDHAGYGKGFKVAEDAPASLSTKHVLALTNRGGASSGDFTTLARTVIDGVRDV YGITLVPEPRLIGCTI >gi|302034468|gb|GL383167.1| GENE 14 11233 - 12498 1172 421 aa, chain + ## HITS:1 COG:ML2336 KEGG:ns NR:ns ## COG: ML2336 COG1167 # Protein_GI_number: 15828259 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Mycobacterium leprae # 4 419 36 459 463 446 54.0 1e-125 MTTPLIDLSHDDLSALHQQLSSEHADLVARGVCLNITRGKPSPAQLDLNADLLTIDVSSH AEDGRDVRNYGGNRGLPEIRRIFGELLGVDVDHIIAADNSSLSIMHDLAMFAFVHGIAGQ KPWSGQNVKFIAPVPGYDRHFAICEHLGIDMIPVELGEHGPDVDEVAKLAADPLVKGMWV VPMYANPNGAIYDERTVRALVSMPTAPDFRIWWDNAYALHHLTDTEHPALPVLQWAEEAG NPDRVFELASTSKITFAGDGVSFLASSKANLDWYLGHAAVRSIGPDKVNQLRHAQYLRDA EGVRKLMRAHREILAPKFAVVNEVLTHRLGGRGVASWTHPTGGYFITLDVMDGTASRVVA LAKEAGIALTPAGASHPLHRDPHDRTIRLAPSFPGMDELRAAMEGVSTCVLLAASEKLLK G >gi|302034468|gb|GL383167.1| GENE 15 12948 - 13598 594 216 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4944 NR:ns ## KEGG: HMPREF0675_4944 # Name: secE # Def: preprotein translocase, SecE subunit # Organism: P.acnes_SK137 # Pathway: not_defined # 1 216 1 216 216 333 100.0 3e-90 MTDEKRNLSDGDDPSVKGELSPRGEDLASNNLPETDEYDVVDPEAEELTTPDDVVDKTPD KADPEDMVIDDPDQLEGAEEVAASARSSRPVRKKDSAGKPARRGKPVRKEASAADEEPAT ASAAKSAGPEPKRKLTKAPVRKERSHHKPADQGKQRIGPVTFTKQSVAELRKVKWPSGDE LGQYFLVVLVFVLLIIAYVSGLDVVFGWVVIKLFGH >gi|302034468|gb|GL383167.1| GENE 16 13622 - 14533 1007 303 aa, chain + ## HITS:1 COG:ML1906 KEGG:ns NR:ns ## COG: ML1906 COG0250 # Protein_GI_number: 15828020 # Func_class: K Transcription # Function: Transcription antiterminator # Organism: Mycobacterium leprae # 107 303 28 228 228 210 54.0 3e-54 MSDSPHFSETNDVEINLDALTPDTAEEKDDEVEIDLGDLSEEDSAEEPEIDLDLGDDEPA EASDDDIARNLGIGQAADDEQDADENESSEADNADNQDVVDAAIEELRGELSSKFGEWYV LHTYSGMENKVKQNLDARVQNFNMEDYIFETVVPTEEVVEIRNGARRTITRVYLPGYVLV RMDLTDDSWGIVRHTPSVTGFVGQSTTPIPLTFDEVVKMLTPSVVARISRENADKTSSPK AKPKVEVADYEVGESVQITDGPFAGVPAQITEINTNNQRIKALVEILGRSTPVDLEFNQI EKI >gi|302034468|gb|GL383167.1| GENE 17 14663 - 15094 717 143 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843342|ref|YP_056569.1| 50S ribosomal protein L11 [Propionibacterium acnes KPA171202] # 1 143 1 143 143 280 99 3e-74 MPAKKKVAAVVKVAPQAGQATPAPPVGMALGPHGVNIMEFCKAYNAQTEGQRGNIVPVEI TIYEDRTFSFVLKTPPAAELIKKAAGIKKGTENPATHKVGKISKDQVREIAETKMPDLNA NDIEAAMNIVAGTARSMGVEVEV >gi|302034468|gb|GL383167.1| GENE 18 15184 - 15882 1163 232 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|213961485|ref|ZP_03389763.1| ribosomal protein L1 [Propionibacterium acnes SK137] # 1 232 1 232 232 452 100 1e-126 MKRSKAYRAAAEKVNLDQLYSPEEALALVASGASAKFDETVDVAIRLGVDPKKADQMVRG TVNLPHGTGKTARVLVFATGEKAEAAREAGADEVGDDDLIAKVQGGYLDFDSVVATPDMM GKVGRLGRVLGPRGLMPNPKTGTVTMDVAKAVSDIKGGKIEFRTDRYANLHFLIGKVSFG SEKLAENYFAALDEILRLKPNAAKGRYLRKITVSSTMGPGVQIDPVAARDAD >gi|302034468|gb|GL383167.1| GENE 19 16311 - 16925 988 204 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|213961499|ref|ZP_03389777.1| 50S ribosomal protein L10 [Propionibacterium acnes SK137] # 1 204 1 204 204 385 100 1e-105 MARPDKVAAVAELKEKFSSAGATVLTEYRGLSVSALKDLRRSLGSDATYAVAKNTLTRIA AKEAGIEGLDDQLVGPTALAFINGDVASVAKGLKNFAKDNPLLVIKGGVMDGNVLDADQV KKLADLESREVLLAKLAGGLKANLTKAAVVFNALPSKAARGLGALQEKAAAEPSVIGGAG EASDQEPKTTETPEASAAQDNTNE >gi|302034468|gb|GL383167.1| GENE 20 16939 - 17331 623 130 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843339|ref|YP_056566.1| 50S ribosomal protein L7/L12 [Propionibacterium acnes KPA171202] # 1 130 1 130 130 244 100 2e-63 MAKLSNEELLDAFKEMTLIELSEFVKQFEETFDVSAAAPVAVAAAGAPAAGGEAAPAEEE KDEFDVILESAGDKKIQVIKEVRGLTSLGLKDAKDLVESAPKPVLEKAKKEDAEKAKEAL EAAGATVTLK >gi|302034468|gb|GL383167.1| GENE 21 17629 - 21108 880 1159 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163796927|ref|ZP_02190884.1| 30S ribosomal protein S12 [alpha proteobacterium BAL199] # 842 1126 1085 1390 1392 343 59 4e-93 MAATRTASKNTSAISPQSGRISFAKIHEPLEVPNLLDLQVESFNWLVGNEIWQSRVDAAL AEGRTDINTKSGLEEIFEEISPIEDYSQTMSLSFRDHRFEDPKHSVDECKDRDTTYAAPL FVTAEFMNNETEEIKSQTVFIGDFPLMTSKGTFIINGTERVVVSQLVRSPGVYFEKTADK TSDKDIFTCKVIPSRGAWLEFEIDKRDTVGVRLDRKRKQNVTVFLKALGWTADRILEEFG THESIRQTLEKDHGVETQDQALLDIYKKLRPGEPPSRDAAQQLLENYYFNPKRYDLAKVG RYKINKKLGLSLPFDQQVLTVDDIVAAIHFVCALHEGTAILPREGQDDIVVEPDDIDHFG NRRLRTVGELIQNQLRTGLSRMERVVRDRMTTQDIEAITPQTLINIRPVTAAIKEFFGTS QLSQFMDQNNPLAEMTHKRRLSALGPGGLSRDRAGMEVRDVHPSHYGRMCPIETPEGPNI GLIGSLASFARVNAFGFIETPYRKVVDGHVTDEVVYLTADEEDRHVIAQANAKLDDDGHF ANDRVLVRQRHGEADEVPSSEVDYMDVSPRQMVSVASALIPFLEHDDASRALMGANMQRQ AVPLVRTEAPFVGTGMEYRCAVDVGDVTLAEKAGSVLSVSADLIDIACDDGTYQTYKLEK FRRSNAGTCINQRPLVKVGQRVEVGTPLADGPSTDNGELALGRNMLAAFMPWQGLNYEDA IILSQRIVSDDVLTSIHIEEHEVDARDTKLGAEEITRDIPNVSEDMLANLDENGIVRIGA EVGTGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGEEGTVIGVRIFD TENGDELAPGVNQMVRVYVAQKRKISIGDKLAGRHGNKGVISKILPVEDMPFLPDGTPVD IILNPLGVPSRMNVGQVLEMHLGWIAHSGWDITQAEGDWAERLREVGLIDIPEESRLATP VFDGATEQEITGLLQYGHPTRDGEMLVDTDGKATLFDGRTGEPFPSKVGVGYMYMLKLHH LVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWAMEAYGAAWALQELLTIKSDD VPGRVKVYEAIVKGENIPEPGIPESFKVLVKEMKSLCLNVEVLNSEGQEIDLRGSEEDTR SGLGIDIGRRPGADNAMAD >gi|302034468|gb|GL383167.1| GENE 22 21277 - 25158 3846 1293 aa, chain + ## HITS:1 COG:ML1890 KEGG:ns NR:ns ## COG: ML1890 COG0086 # Protein_GI_number: 15828009 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, beta' subunit/160 kD subunit # Organism: Mycobacterium leprae # 1 1291 1 1314 1316 1745 66.0 0 MLDTNYYDRLQIGLATADQIRAWSHGEVKKPETINYRTLKPERDGLFCEKIFGPTRDWEC YCGKYKRVRFKGIICERCGVEVTRSNVRRERMGHIELVAPVTHIWYFKGVPSRLGYLLDI APKDLEKVIYFAAYMITAVDDEARHRDLPSLEAKVQTERSRLEQRRDSELEARRVKLEED MAQLEADGAKADVRRKVKDGAEKELKHIETRAQRQIDRLDAVWDRFKNLKVQDLEGDEIL YREMKSRFGKYFEGSMGAEAVKRRLHDFDLKSESEKLREIIKTGRGQKKTRALKRLKVVQ AFLDSGNSPEAMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLVDL GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVSGPGNRPLKSLSDMLKGKQGRFRQNLLGK RVDYSGRSVIVVGPQLKMHQCGLPKTMALELFKPFVMKRLADLEHAQNVKSAKRMVERQR PVVWDVLEEVIKEHPVLLNRAPTLHRLGIQAFEPQLIEGKAIQLHPLVCSAFNADFDGDQ MAVHLPLSPEAQAEARVLMLSTNNILKPADGRPVALPSHEMIIGAYYLTMALDGLKGEGR AFTSLAEAIMAHDLGELEIGAKIKLRLKGIVPPHDETVRADGSVILDTTLGQALFNEVLP DDYPYVDFLVGKKQIGKIVNDLSERMTQLEVAHVLDNLKDIGYKWGSLSGVTVSIGDVQT PPTKPEILAGYETRAAKVDREYDRGAVTEEERRQDLIQIWTEATAELTAAMEANFTQTNP IHMMVDSGARGSMTQMRQIAAMRGLVADPKGDIIPRPIKSNFREGLTVLEYFISTHGGRK GQADTALRTADSGYLTRRLVDVSQDVIVRENDCGTTRGMPKTIAVDDGNGNLVRVEGLDT AVYARCLAADAVDANGNVVVEANSDLGDEEISRLIAAGISQIKVRSVLTCTAAQGCCARC YGRSLSTGHLVDVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRVVELFEA RSPKGKSPLAEAAGVIRIDESDNRRKLVLVRDDGEDDVEYVVPRRARLEFDLDGTHRVIR DGVRVAAGEQLMGGTADPQDVLRISGVRRVQEYLVKEVQKVYNTQGAGIHEKHIEIVIRQ MLRRITVIESGDTQMMPGELVDRGAYEAANRKAVAEGGRPAEGRPVLMGITKASLATESW LSAASFQETTKVLTDAAINGKTDTLVGLKENVILGKLIPAGTGLEVYRNMRVEPTAEAKA AAFTMNYDPFDYDFGSGSGEAVPLDDLDLGDLG >gi|302034468|gb|GL383167.1| GENE 23 25397 - 26920 710 507 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4936 NR:ns ## KEGG: HMPREF0675_4936 # Name: not_defined # Def: actinobacterial surface-anchored protein domain protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 507 1 507 507 1003 100.0 0 MQTKKNLRRPVLLAVLMTVIASLFAPMSWATDAKVVLSKNHTDAFYITTDSGVPVVKVAN GLHSRMYEPNEVEFQIQSDTYGRQYRLTGLSESLLEGYYTGSENTAEWFEPGWNAPGFTK NGFDALRVDFTSITGPGKMYLVGNSPEADENGKLGTFLAGDTYQVVKGASLPIKGHQHAH WFFTRAGKYTMSGVAVGKKIDGKEVSSQPFTLSWEVLKSDDDKRPGASDDSDEPSAEPLR DPSEEPSSAPHDAATPKIDDTKVEITQGHLDVFAGIARNRKLSMVIKDDRSGQAIYRAPE AVTLRVGENAYRKLPQSMHDRFAPEGYLLAQNGDNQQEVLFPGWDTYGVAPDFGAVDLEF VDVKGPGKVYMFMQGIGKLRSPLASGSWVLASGEFISQKKPGHVHTNWLFGKPGTYTMKV RLRGVPVKVIDGKAVVSEPVRYTWVVGGRSGSQSSAVVSARQLVKRVDEKTAPEPFTPMP TMDSGAVSRDATRTPQLTITGLPQTGI >gi|302034468|gb|GL383167.1| GENE 24 27108 - 28121 569 337 aa, chain + ## HITS:1 COG:no KEGG:PPA1880 NR:ns ## KEGG: PPA1880 # Name: not_defined # Def: putative adhesion or S-layer protein # Organism: P.acnes # Pathway: not_defined # 39 337 1 299 299 463 98.0 1e-129 MLTKSRGGGAVFLAQLPDPWLSEECLRRCMALTERFPIVKKHVIGASLTGLALALTPFAG AASAHATLPDYFGIDAPDHVDVNKPLNFRLDKCDMDGASQIKWGVAKGESAPPETWTTVK DEQQRVSYTPTSTGTYTIWAYCANVSGERVSDSGSSSFTSYSTKATMNPTKWAADEYVRM VTKGFNSSDTLSASLVRDGDTKDYGDLLDSQRIWYQWASETSDFTFPGNVPVGDYTLTFT DHGNTARTVRVHLHHGAGYLLSGDTPKPTPTPTPTPTPTPTLKPTPTPTPAPTSGEATVK PVPGAATTSAATVVTDGSDQGVVRVAGGLGTLPHTGV >gi|302034468|gb|GL383167.1| GENE 25 28274 - 28804 362 176 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4934 NR:ns ## KEGG: HMPREF0675_4934 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 176 1 176 176 260 100.0 2e-68 MKRTVLAGAVAACLGMAVFAVTTPDARAESAPIPVPTSKATAHSRLANRPSSGITWSPRH HGIVPPEIHGGTIYLPDISAGPIILPTIKGGTITLPDIKGGTITLPDISGRPIILPKIEG GAVSIPPIVFPSLHARGSIQVNGTLPGWANGRGNFLAAGGMGAPAGRPMSLPQTGA >gi|302034468|gb|GL383167.1| GENE 26 29068 - 29490 718 140 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50840934|gb|AAT83601.1| 30S ribosomal protein S12 [Propionibacterium acnes KPA171202] # 1 140 1 140 140 281 99 2e-74 MRSQGIPNPPDGKRYQPVPTIQQLVRKGRTDKISKNKTPALKGSPQRRGVCTRVYTTTPK KPNSALRKVARVRLSSGIEVTAYIPGVGHNLQEHSMVLVRGGRVKDLPGVRYKIVRGSLD TQGVKGRKQARSRYGAKKEK >gi|302034468|gb|GL383167.1| GENE 27 29494 - 29964 799 156 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843330|ref|YP_056557.1| 30S ribosomal protein S7 [Propionibacterium acnes KPA171202] # 1 156 1 156 156 312 100 1e-83 MPRKGPAPKRPVMVDPVYGSPLVSQLVSKILLDGKKTVAQNIVYTALEGCRAKNNTDPVQ TLKRALDNIKPSLEVKSRRVGGATYQVPVEVKPARQTTLAMRWLVNFSRERREKTMAERL MNEILDASNGLGASVKRREDTHKMAEANRAFAHYRW >gi|302034468|gb|GL383167.1| GENE 28 30097 - 32190 2240 697 aa, chain + ## HITS:1 COG:ML1878 KEGG:ns NR:ns ## COG: ML1878 COG0480 # Protein_GI_number: 15828005 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Mycobacterium leprae # 4 695 8 700 701 950 68.0 0 MAKTDLSKVRNIGIMAHIDAGKTTTTERILYYTGKSYKIGEVHDGAATMDWMEQEQERGI TITSAATTTFWHDTQINIIDTPGHVDFTVEVERSLRVLDGAVAVFDGVAGVEPQSMTVWR QAAKYGVPRICYINKLDRTGASFDHCVKTIKERLHAIPVLLQLPIGAEDQFMGIVDLVEM NAKTWRGETELGAHYETEDIPADMKDEAKAARAEMLETVAENDEEFMELYLEDPDAVTVD QVKAAIRRGVLASAFTAVTCGTSFKNKGVQPLLDAIVDYLPSPTDVPAISGFKPGDESVE LERRPCDDEPLSILAFKIASDPHLGKLTFVRVYSGVLHAGDQVLNATKGKKERIGKIYQM HANKREEIESIGAGMICAVMGLKDTTTGETLCDQTNPIILESMTFPAPVIEQAIEPKSKA DQEKLSNAIQRLVEEDPTFRVHTDEETGQTIVAGMGELHLDVFIDRMKREFHVEANIGKP QVAYRETLRKPVEKYEYTHKKQTGGSGQFARVIIAIEPKEPGFGYEFVNAVTGGRIPKEY IPSVDAGVQESMQFGVLAGYPVEDVKVTLLDGAYHEVDSSEMAFKIAGSMAFKEAARKAN PGLLEPLMAVEVTTPEDYLGTVIGDLNSRRGQIQEMVEEHGNKVVRALVPLSEMFGYVGD LRSKTSGQASYSMEFDSYGECPSSVADEIIAKANGGK >gi|302034468|gb|GL383167.1| GENE 29 32201 - 32410 176 69 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|314979727|gb|EFT23821.1| ## NR: gi|314979727|gb|EFT23821.1| hypothetical protein HMPREF9573_00945 [Propionibacterium acnes HL072PA2] # 1 54 1 54 55 105 100.0 8e-22 MEVPLVHDRGFEFVNPRLVMSNSGKSITLSESGDYMRMPCLGFMNVLARPHIVGRGGGAP HCGAGPKRS >gi|302034468|gb|GL383167.1| GENE 30 32409 - 33812 583 467 aa, chain + ## HITS:1 COG:no KEGG:PPA1874 NR:ns ## KEGG: PPA1874 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 439 1 439 1100 784 98.0 0 MTDESGHDKEQHDQLSTSNQSNNAYDSIDPSQTVIRPAPTPTPQPSSGPEILADGRGTGP ADQPGRPDGGFGQPAAGPASVGGEPQRQPQTMPPNPPLPNQPHQSGGFTGPQGSPRPDQL NGPRPGWQSGWQPQGHSGPYGPGPQPGQQMGHPGVQPGQQSVPQPGTAPAYPAQAPGQRS GVQPGMAPNPGHPGPYQTSPQQGGYTITQPLPTMPAAGQAPMMQQPYQGALAVQPSSNWF ADAWGVFRRIWRGDVLEAFDLSMASRKFWLWTGLAQAGFAGLAYANLLWRVMSSIDNGAN HVTHSFLGWFGMDDPNQSYEITGFDFSAWLKAFITMFLAVAVVFAVRPLFIKMVYAWRQS RQTWEVAYTVNSVATLSSTFVVAVVSVLWFVPSGALVLVGLVMLGALGAMCQFLGELLLY TGVNKTGGFPPYSRFPLVPHVIGTGFYAVVVAVLWLLCGTVGRGIMS >gi|302034468|gb|GL383167.1| GENE 31 33848 - 35668 1147 606 aa, chain + ## HITS:1 COG:no KEGG:PPA1874 NR:ns ## KEGG: PPA1874 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 606 481 1086 1100 1143 99.0 0 MRRGIVALCVAMAFVLSGCGAVIGTTLKVNDDGSGSRSLTVTFTNDDSDEAKQMFAKPLS VYDASIKKHVPSQLTYNGLHMQGKSMVASFQLDFSSPQDYLTKVRAIIGGSKDPTSDIQN INTPLVNGVVGKENFTSHDLLEWLPDGLEQDGIVDSGNVGNVLDSENNMTLTIGGKNFTS QTPLDIEHVADNGFDQVVVQLNFKSMKDVGAVVWYFSEQAWGADKENKVKAFLDQVTKDG NGEAADAKSDDLPENVRQRLSSTYPVGKKVTIKAGSLDEVDKRVAQALGNKSGSLKISPG QAKQSDPSSGATAAFVIPLSLTSQVSCSAICSRDAGDPVMVVTHPSQWVDEDSSAPSDEG QTSTQIIRGDAPLTLDVPLETKKTSTAIHLNPGKEVSYEANLTFDNAVLGDNKEEVKKLL RGVRNWSVEQKSDKSTTQYTVRGSADDALTFSKKYSGSDSPLVVENELKPTTFKNHWMIV ITPLDWMPRGEIKIITDHGKFDDGSSEKTWTPGESTVFRTRASTLRTGPVVAAVVIGVLI VAAAVLAYFKLDAIRAWRKKRAEAARQQAAQNGQYRIPAQSQTPQNQQWPSQPGAPVPPS PGGYPP >gi|302034468|gb|GL383167.1| GENE 32 35605 - 35934 116 109 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4926 NR:ns ## KEGG: HMPREF0675_4926 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 109 28 136 136 204 100.0 6e-52 MWIFLGGSQERFWTGPRPEVRELVLLFCTRPGIVKPGFPLLLAATRQPLPRLHAGSMTRR ATWQRAPPSLEERALTADRFLSTGHRHYGQGGYPPGDGGTGAPGCDGHC >gi|302034468|gb|GL383167.1| GENE 33 35980 - 37173 1411 397 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 397 1 407 407 548 67 1e-154 MAKAKFERTKPHCNIGTIGHIDHGKTTLTAAISKVLHDKYPELNEESPFDQIDKAPEERQ RGITISIAHIEYQTEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMPQTRE HVLLARQVGVPAIVVALNKCDMVDDEELIELVEMEVRELLTSQEFDGDNCPVVRISAFQA LQGDEKWTQSILDLMDAVDEYIPQPERDLDKPFLMPIEDVFTITGRGTVVTGRVERGVVK TGEEVEIVGIHEKTQKTTVTGVEMFRKILDEGRAGENVGVLLRGTKKEDVVRGMVLSKPG STTPHTDFEGQVYVLKKDEGGRHKPFFSHYSPQFYFRTTDVTGTVELPEGTEMVMPGDNT DMTVHLIHPVAMEDQLKFAIREGGRTVGAGRVTKIIK >gi|302034468|gb|GL383167.1| GENE 34 37297 - 38865 733 522 aa, chain - ## HITS:1 COG:Rv1069c KEGG:ns NR:ns ## COG: Rv1069c COG4425 # Protein_GI_number: 15608209 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Mycobacterium tuberculosis H37Rv # 12 499 85 561 587 295 37.0 2e-79 MVAVNVWLSTLFAYGIGGFIGRISRWLAEITRLHVTVSTSAVRGIRRSWYAILTLISLGM FIWCTRQQRSVSDAVGLPRKVWFAQTVGVLTGLVFFVTTVLLMRFIAHGIRTLYTGVHRF IAQPVLAVVVVALSVALLLWATNNVIVRTTANGVAHVMAQTNAQTAAGRTPPTSPLRSGS PASLQTWDGLGREGKDVVTDGPSAAMISDVMGKPAKEPIRVYAGLNAQRDYTAEARGVLA ELIRTGAFHRKVLVIQNGTGSGWVEEWSVSAVEYLTRGDCATATMQYSYLGSVGAFLLDR ESPKQGARALFTIIYNYWKTLDPQTRPKLYTSGVSLGSFGGQAAFASINDMVSKVDGAVW VGTPGFTPIWKDLEKHRREGSPEIVPVIGNGRVVRFIGNPREITHDHWGAPYPPWRSHTR IAYVQHPSDPVTWWSPEMIWAEPDWMRERAGNDVNPHILWTPWSSFWQVTADMTLATTPP GGHGHNYHSEFIPIWAAVLGISCDDNTVAAVAKAIPKTSAPR >gi|302034468|gb|GL383167.1| GENE 35 38939 - 39151 126 70 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLARRSTFAGQLRLASRAGYPCLGTHGTIWVVSATSFQYRRRAVFTCHDRTLPRCPDKKS LGLPLRWAEA >gi|302034468|gb|GL383167.1| GENE 36 39168 - 40847 1528 559 aa, chain - ## HITS:1 COG:DR1736 KEGG:ns NR:ns ## COG: DR1736 COG0737 # Protein_GI_number: 15806739 # Func_class: F Nucleotide transport and metabolism # Function: 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases # Organism: Deinococcus radiodurans # 2 520 98 638 678 242 31.0 1e-63 MATIAKQVRAEQGADSVVMLDNGDTIQGTPLTYLSAKQPDKLGHDEVMARAFNLVGYDAA NIGNHEFNYGIAELFRYHNDLKAPLLCANVIDVKTGKPLTQGSLMLTKNVAGHEVKVGIV AVTTPGSMVWDKANLVGKVDIADPVKTAARYSVRLRKDGADVVVVLVHAGLSEVQAAPVY HGLPENNATVLAKSVPEVDLVVIGHTHQDDPVEIVDGISGHKVVITQPDYWARSVSQVTI PLNFSATKATIRHDQITVRPRYTRDVEEDTEFASDSQLQTDHKATVRYVNSVVATSTETL TTERSMVEDTPILDFIGKVEADTVAKAIKGGTYNGIPVIAQVSPFSRTAAFPKGDVKIKD IAGLYVFDNTLAGILLTGKQLKDYLEYSAKYFKQVKKGAAVNPAPASEGGDTQADYQGKP VWDYNYDAVTGVTYSIDISRPVGARILGLSWQGRPVAHDQRFVLAINNYRMSGSGDYPHV TEAPVVWDEILEIRQLLIDTAMAMKTIDPKDFFDRNWFLTTTGETWPSSGKPGDGGTSGG SQPGSGSPNHPTTLPGTGV >gi|302034468|gb|GL383167.1| GENE 37 40853 - 41110 191 85 aa, chain - ## HITS:1 COG:no KEGG:PPA1871 NR:ns ## KEGG: PPA1871 # Name: not_defined # Def: 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor (EC:3.1.4.16) # Organism: P.acnes # Pathway: Purine metabolism [PATH:pac00230]; Pyrimidine metabolism [PATH:pac00240] # 1 76 1 76 648 136 92.0 2e-31 MHDNPLGTSLSRRALLAGSLGAGLAMTAVDRSFASPIPTVSDSTLSTAALTVLATTDIHG HVFDWDYFADAAFPPSGSVPRLPWV >gi|302034468|gb|GL383167.1| GENE 38 41213 - 42910 1476 565 aa, chain - ## HITS:1 COG:PA1794 KEGG:ns NR:ns ## COG: PA1794 COG0008 # Protein_GI_number: 15596991 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Pseudomonas aeruginosa # 11 559 8 555 556 559 51.0 1e-159 MAEPTGNPAESSSDFIHQVVRADIHQDTYGGRVQTRFPPEPNGYLHIGHAKAIVTDFGVA EDFGGTCNLRLDDTNPGTEETEYVESIVADIEWLGYSPAHVVHASDYFEQLYEWAKYLVR EGLAYVDDQSPETIREQRGGYGKPGIESPYRNRPAEESLDLLRRMRAGEFPDGSRCLRAR IDMQAENMWLRDPVMYRIRHQPHHSTGTEWCIYPTYDWAHGQSDAIEGVTHSLCSLEFNS HRPLYDWFLSHLPLDGPAPKQREFARLELTHTITSKRRLKSLVTNNIVDGWDDPRMPTLR GMRRRGYPAAAIRAFCQAVGTTKNNSVKAIEEFESFMRRELNATAQRRMAVLHPLKLVLD GWPTDDDGNPVVEWFQLVNNPENPDDGTRRVPFTGELWIEADDFREDPPRKFFRLSPGHE VRLRGAYLVTATDVVKNPDGTIAEVHASYDPQSRGGTAPDGRKVKSTMHWVSAGHAIPVT ANLYDRLFSAEIPGSQTGEALDDLNPHSRETLTEVMAEPALANVAPGEVVQFERLGYFAA DHDTAVFHRTVGLRDEWAQLQKRQA >gi|302034468|gb|GL383167.1| GENE 39 42964 - 44457 1507 497 aa, chain + ## HITS:1 COG:AGl791 KEGG:ns NR:ns ## COG: AGl791 COG0008 # Protein_GI_number: 15890511 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 8 488 10 474 488 384 44.0 1e-106 MTDLHPARTRVAPSPTGDPHVGTAYMALFDKAWAQRTGGQFVLRIEDTDRTRLVAGSEDQ IYQTLEWLGLSPDESPLVGGPYEPYKQSERLDTYKPLVEKLIESGHAYRCWCSQERLKQL REERAAAKSPETGYDRMCLGMSKEERAKLPGFTETPVVRMLIPEDVDLEFDDLIRGTVRA PRPDDQVILKADGFPTYHMAVVVDDHLMGIDTVVRGEEWISSTPKHLLLYKWLGWEAPRF AHMPLLRNTDKSKISKRKNPAARLMWFREQGYLPEALRNFLQLLAYPTVAEGQEMEDFDS FVSRFDWGDVSTGGPVFDVTKLDWLNGQYIRSLDAEVLTDRVLDYADQMGQARQVLGRDL TQEDRCVIHAAMPLVRERLTLLSEALPKLAFLLTDDDALVFDGDSVAKLKAGADDIQHAA VEVLKGLDDFSADAIQAALRARLCDEMGIKPRLAFAPVRVAVTGSRVSPPLFEAMEILGK ESTLRRMQRFEAEIDQK >gi|302034468|gb|GL383167.1| GENE 40 44532 - 46136 599 534 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4920 NR:ns ## KEGG: HMPREF0675_4920 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 87 534 1 448 448 780 95.0 0 MLVTCYWALVWRTPVWDIDDLYFATRSGTPGGRIDWADFARLTVCDLVERNGRFSDMMVQ LVMAMGGWIRVPLILSSVTASLALWLMVRGLIRDLREVVSPGADLLAGIGAFLAPMAVIG FEPHMGGDTIMFIAANIGYMWSLALGIVSILLLWSQRGPNVDHGWVLWIAVVLSCVASIH HELNAPGIVGAIVAMALITPAGKWTTRWAVALIVAAVGNAARMGMPGLWARRHRVGDPYP YPKSTGEIPKRVSFIVHSVSHSLSNYPVVFFAIVLSVIALCLVVMRRGFHRRAIGILLAL FCVASVGLAAASLRIITVLAQRKLVGDIRLYFSATGVLSGVCFGIVMAILVVLTVMVARI PGCGMVGVSTGAAFGYYALPLIQGSPGGRTSFLGLVVFTVSALIWAWAAVGLMRGGTTQG DSCIPASESGARVMAGSETQLATVLAMVTTASCLGTGPLGAWEMLEGATLNGSVWRAVNA QLDAARRGERDTVVVPKALPAPDWLPDYAGRRGTTEARLHQYYDLPKNVTVVRR >gi|302034468|gb|GL383167.1| GENE 41 46117 - 48033 827 638 aa, chain - ## HITS:1 COG:BS_bioF KEGG:ns NR:ns ## COG: BS_bioF COG0156 # Protein_GI_number: 16080074 # Func_class: H Coenzyme transport and metabolism # Function: 7-keto-8-aminopelargonate synthetase and related enzymes # Organism: Bacillus subtilis # 241 628 2 382 389 218 33.0 3e-56 MRATGTLDDEPYHVSGAESLVAPGMIEQTVAGLTQRALAPGHTVKARQVRVSLDQLDVEP TIIPALPTELKECPDPVAARQYFVDVLSRFVPHPAEALRVLTEGPTMRGAAMVEAGTDRR LEADPLRGVRVTKFGDLTESAPGASLAHKKHHHEAVLLASKVAAAPGVLAEFCISDDPHY TRGYVCVDGVYTTVTNVKADGDPNGGRVILVDTARADPTTITTWLENHPVLIGPATASSQ KATSWHGHLCGRLNAWRAAGLERRPRTFCSAQDPDAVTTDGPALLFSSSDYLGLSTEPKV QQAMNNTVRRLGSSSGGSRLTTGTSVAHHQAEHEIAAWLGYPQAVFMASGYQANIATIQL LADPHVTVISDAENHASLIDGCRLARARTVVVPHADLDAIDTALDCVTTDRALVLTEGVY SMGGDVAPVGELVEIAHRHGALVVVDDAHGIGTVGPTGRGATEELPASQRPDVLLGTASK ALGVEGGFACVDETLATLMRNCARGYVFSSAPSPVVAAGVAAAVEYLRTDTRRVCSLQAN VAQARLLLAEADLIPPSAAHDRGPIIRIPVGPESRAVAAQEELARRGLMVGAIRYPAVAR GDAILRICLTARHTDEHIRILVTSLREVLDGALSDAPR >gi|302034468|gb|GL383167.1| GENE 42 48591 - 48902 525 103 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843319|ref|YP_056546.1| 30S ribosomal protein S10 [Propionibacterium acnes KPA171202] # 1 103 1 103 103 206 99 6e-52 MAGQKIRIRLRAYDHEVIDSSARKIVDTVTRTGAKVAGPVPLPTEKNVFCVIRSPHKYKD SREHFEMRTHKRLIDILEPTPKTVDSLMRLDLPAGVDIEIKLP >gi|302034468|gb|GL383167.1| GENE 43 48914 - 49585 1139 223 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843318|ref|YP_056545.1| 50S ribosomal protein L3 [Propionibacterium acnes KPA171202] # 1 223 1 223 223 443 99 1e-123 MTNERTVKGVLGTKLGMTQLWDEHNRLVPVTVIQAGPCVVTQVRTPETDGYSAVQLGYGA VKAKNVTKPEAGHFEKAGVTPRRHLVELRTADASEYTLGQEIAADVFSESDFVDVTATSK GKGTAGVMKRHGFGGLRATHGVHRKHRSPGSIGGCSTPGKVIKGLRMAGRMGVERVTVQN LQVHSVDAERGIMLVRGAVPGPKGSLLVVRSAAKKAAKNGDAA >gi|302034468|gb|GL383167.1| GENE 44 49582 - 50487 1546 301 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|213961379|ref|ZP_03389657.1| 50S ribosomal protein L4 [Propionibacterium acnes SK137] # 1 301 1 301 301 600 100 1e-170 MNETKTIDVLDVKGKKAGSAELPGDLFDVNTNIPLIHQVVVAQLAAARQGTHATKTRGQV SGGGKKPWRQKGTGRARQGSTRAPQWVGGGTVHGPQPRSYAQRTPKKMVGAALRGALSDM ARDNRIFVVTSLVDGDKPSTKQAKAVLSGLAELRKVLVVLDRSDEIDWLSVRNLSEVHVL AADQLNTYDVVNARTIVFSQAGLDAFVGARSANTQALSAEPEVPETNVADQHPYGEDSFR GDNPPAGFDIKGNEDSMKFHEPSSPWYGRTIAEVWFRSAAAAEAAGFVNAVKSDSEKEDA K >gi|302034468|gb|GL383167.1| GENE 45 50484 - 50792 504 102 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843316|ref|YP_056543.1| 50S ribosomal protein L23 [Propionibacterium acnes KPA171202] # 1 102 1 102 102 198 99 2e-49 MSELKIRDPRDIILAPVVSEKSYGLLDQNTYTFVVKPTANKTEIKIAIEQIFGVKVTSVN TMNRKGKVRRTRTGVGKRPDTKRAIVTVAEGDRIDIFTGPVA >gi|302034468|gb|GL383167.1| GENE 46 50819 - 51655 1467 278 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843315|ref|YP_056542.1| 50S ribosomal protein L2 [Propionibacterium acnes KPA171202] # 1 278 1 278 278 569 100 1e-161 MGIRKYKPTTPGRRGSSVSDFVELTRSTPEKSLLVAKPKTGGRNNTGRITTRHIGGGHKQ AYRIIDFKRYDKDGVPAKVAHIEYDPNRTARIALLHYADGEKRYIIAPDGVGQGTVVVSG PEADIKPGNNLPLRNIPVGTTVHAVELRPGGGAKMGRSAGASVQLVAREGKYATVRLPSG EMRMVDIRCRATIGEVGNAEQININWGKAGRNRWKGIRPTVRGVVMNPIDHPHGGGEGRT SGGRHPVSPWGKPEGRTRNKKKASSRLIVRRRKSGKKR >gi|302034468|gb|GL383167.1| GENE 47 51671 - 51952 496 93 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843314|ref|YP_056541.1| 30S ribosomal protein S19 [Propionibacterium acnes KPA171202] # 1 93 1 93 93 195 100 1e-48 MPRSLKKGPFVDEHLAKKVTAQNEAGTHNVIKTWSRRSMVTPDMIGHTIGVHDGRKHVPV FVTESMVGHKLGEFAPTRTFKGHVKDDKKARRR >gi|302034468|gb|GL383167.1| GENE 48 51970 - 52431 746 153 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843313|ref|YP_056540.1| 50S ribosomal protein L22 [Propionibacterium acnes KPA171202] # 1 153 1 153 153 291 100 1e-77 MSKTERPSRRAALLGDRPGSYAIARHVRMSASKCRRVINLVRGMDAVDAVTMLKFQPQAA AEPIRKVIASAMANAEQTEGLRADDLYISQAFVDEGITMRRIRPRAKGSASRILKRSAHI TVVVEPKEARQARKKAKSGRPAAAAKSETEKGA >gi|302034468|gb|GL383167.1| GENE 49 52433 - 53242 1372 269 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843312|ref|YP_056539.1| 30S ribosomal protein S3 [Propionibacterium acnes KPA171202] # 1 269 1 269 269 533 100 1e-150 MGQKINPHGFRLGVTTDHKTRWYAEKQYAELVGEDVKIREWLHKNLERAGLSSIEIERRS ERVTIFLYAARPGIVIGRNGAEAERVRGELEKLTGKQIQLNILEVKSPETDAQLVAQGIA EQLAARVAFRRAMRKAQQSAMNAGALGIRIKCSGRLGGAEMSRSEGYREGRVPLHTLRAD IDYGFFEARTTFGRIGVKVWIYKGDVTGTRAERAAQKAARQAAQGGRGGRGGNRRGRGDR PDRRGGRRRAEAAKQSAETPAPQTENAGA >gi|302034468|gb|GL383167.1| GENE 50 53244 - 53663 740 139 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843311|ref|YP_056538.1| 50S ribosomal protein L16 [Propionibacterium acnes KPA171202] # 1 139 1 139 139 289 100 7e-77 MLIPRRVKYRKQHHPKRTGAAKGGTQLAFGDYGIQATEGGYLTNRQIEAARIAMTRYIKR GGKVWINVYPDRPMTKHPAESRMGSGKGTPEWWIANIKPGRVLFELSGVPEDVAREAMRL AIHKLPMKARFISREGGDN >gi|302034468|gb|GL383167.1| GENE 51 53663 - 53896 376 77 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843310|ref|YP_056537.1| 50S ribosomal protein L29 [Propionibacterium acnes KPA171202] # 1 77 1 77 77 149 100 1e-34 MPKLSAAELRQLSGEELRNKVRELKEELFGLRFQSATGQLENTARLREVRKDIARVYTVL QERNLNIVDDPDSTKEA >gi|302034468|gb|GL383167.1| GENE 52 53899 - 54171 452 90 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843309|ref|YP_056536.1| 30S ribosomal protein S17 [Propionibacterium acnes KPA171202] # 1 90 1 90 90 178 100 2e-43 MSENTAERTTRRKVREGLVVSDKMNKTITVMVEDRVKHPLYGKVMTKSVRLKAHDENNEA GMGDRVRIMETRPLSATKRWRLVEIIEKAK >gi|302034468|gb|GL383167.1| GENE 53 54768 - 55136 616 122 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843308|ref|YP_056535.1| 50S ribosomal protein L14 [Propionibacterium acnes KPA171202] # 1 122 1 122 122 241 100 2e-62 MIQQETRLKVADNTGAKELLCIRVLGGSKRRYAYLGDTIVCTVKDAIPGGNVKKGEVVKA VVVRTVKSHRRPDGSYIKFDENAAVLLKGDGEPRGTRIFGPIARELREKKFMRIVSLAPE VI >gi|302034468|gb|GL383167.1| GENE 54 55137 - 55505 615 122 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843307|ref|YP_056534.1| 50S ribosomal protein L24 [Propionibacterium acnes KPA171202] # 1 122 1 122 122 241 100 2e-62 MKSLKIKKGDRVKVIAGNDKGAIGEVLSVDPARERVVVEGVNIRKHHRRDMPTPQGGTTK GGIISSEAPIHVSNVQLVTKIDGKDVVTRVGYRRVDVTKRRPDGSEYAAQRSVRYLKKEE AK >gi|302034468|gb|GL383167.1| GENE 55 55502 - 56134 1084 210 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|213961424|ref|ZP_03389702.1| 50S ribosomal protein L5 [Propionibacterium acnes SK137] # 1 210 1 210 210 422 99 1e-117 MSTDAIAHEMPRLKKQYREQIRAAMQEEFGYRNPMLIPGLEKIVVNMGVGDAAHDSKVMD GAIRDITAITGQKPQVTKARKSIAQFKLREGQPIGCHVTLRGDRMWEFADRLLTLALPRI RDFRGLNSNQFDGKGNYTFGLSEQVMFLEIDQDKIDRIRGMDITFVTTAQTNEEGKALLK HLGFPFKAKDDPKKAKTKRGPAYYAKKKKK >gi|302034468|gb|GL383167.1| GENE 56 56142 - 56327 331 61 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843305|ref|YP_056532.1| 30S ribosomal protein S14 [Propionibacterium acnes KPA171202] # 1 61 1 61 61 132 100 2e-29 MAKTALKVKAARKPKFGVRAYTRCQRCGRPHSVYRKFGLCRICLREMAHAGQLPGVTKSS W >gi|302034468|gb|GL383167.1| GENE 57 56487 - 56894 683 135 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843304|ref|YP_056531.1| 30S ribosomal protein S8 [Propionibacterium acnes KPA171202] # 1 135 1 135 135 267 100 3e-70 MTMTDPIADMLTRLRNANQAYHDQTSMPHSKIKAGIAGILKSEGYIADYKVNEPKEGEVG KTLTLTLKYGENRERSIAGVRRISKPGLRVYAKSTALPKVLGGLGIAIISTSQGLLTDKQ AHEKSVGGEVLAYVW >gi|302034468|gb|GL383167.1| GENE 58 56923 - 57465 921 180 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843303|ref|YP_056530.1| 50S ribosomal protein L6 [Propionibacterium acnes KPA171202] # 1 180 1 180 180 359 100 7e-98 MSRIGRLPIAVPSGVEVKLDGQYVEVKGPKGTLNFTVREPITVSKNDEGAILVERPDDER ENRSLHGLTRTLINNMVIGVTEGYEKKLEIQGVGYRVLSKGPKQLEFNLGFSHPVIVDAP EGITFAVENPTKFSVQGIDKQVVGETAANIRKIRKPEPYKGKGVRYEGENVRRKVGKAGK >gi|302034468|gb|GL383167.1| GENE 59 57467 - 57850 615 127 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843302|ref|YP_056529.1| 50S ribosomal protein L18 [Propionibacterium acnes KPA171202] # 1 127 1 127 127 241 100 2e-62 MASTLTVRKSLSDRAKARARRQARGRKKIFGTVERPRMVVTRSSKHVFVQVIDDVAGNTL VSASTMEAELREMSGDKTAKAARVGTIIGERAKAAGITKVVFDKAGNQYHGRIAALADAA REAGLDF >gi|302034468|gb|GL383167.1| GENE 60 57875 - 58522 1070 215 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843301|ref|YP_056528.1| 30S ribosomal protein S5 [Propionibacterium acnes KPA171202] # 1 215 1 215 215 416 100 1e-115 MSGTQRRGGGAGGERRGRDNRRGQNDRNRNQNEYLERVVAINRVAKVVQGGRRFSFTALV VVGDGEGSVGVGYGKAKEVPAAIAKAVEEAKKHFFKVPLVGRTITHPVIGEKAAGVVMLR PASPGTGVIAGGSARAVLECAGVHDVLAKSLGSSNAINVVHATVDALQQLEEPEEVARRR GKSVEDIAPAAMLRARKEADEAAAAARMEEKAGVN >gi|302034468|gb|GL383167.1| GENE 61 58522 - 58704 300 60 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843300|ref|YP_056527.1| 50S ribosomal protein L30 [Propionibacterium acnes KPA171202] # 1 60 1 60 60 120 100 7e-26 MSKLKITQIKSGIATKPNHRETLRSLGLKRIGDTVIKEDRPEFRGMVRTVRHLVTMEEVD >gi|302034468|gb|GL383167.1| GENE 62 58706 - 59146 752 146 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843299|ref|YP_056526.1| 50S ribosomal protein L15 [Propionibacterium acnes KPA171202] # 1 146 1 146 146 294 100 3e-78 MAIELHDLKPAPGAHKAKTRVGRGEGSKGKTAGRGTKGTGARKNVPEFFAGGQMPIHMQA PKLGGFHNPFRTEYQVVNLDKVEALFPKGGKITVDDLVSVGAVRDNELVKVLGTGELTVK VDLVVDAWSKSAQEKIEKAGGSVTKR >gi|302034468|gb|GL383167.1| GENE 63 59260 - 59493 117 77 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRQHDVINEATHHVFEHNRPFSQCALPVASGPPASVTTFHAARLAATHRCEVITAREPHG VRDHTPRPRERLLRLNK >gi|302034468|gb|GL383167.1| GENE 64 59496 - 59666 65 56 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4896 NR:ns ## KEGG: HMPREF0675_4896 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 56 1 56 56 100 100.0 3e-20 MLASYALDPRNAFNQTNLKAINQSLTNYNINPDMGAVRAMVEDGLPPLELGLDPTW >gi|302034468|gb|GL383167.1| GENE 65 59660 - 59908 272 82 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4895 NR:ns ## KEGG: HMPREF0675_4895 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 82 1 82 82 143 100.0 2e-33 MVTRSTPYIGTHIGVSVRLVICRTTIGMIDSVAIGVWSAVRQYSAADRIVSFLFTGTPKN LTNYGAATFQTTRAEDFGYVKI >gi|302034468|gb|GL383167.1| GENE 66 60102 - 61805 1746 567 aa, chain + ## HITS:1 COG:ML1121 KEGG:ns NR:ns ## COG: ML1121 COG0747 # Protein_GI_number: 15827554 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Mycobacterium leprae # 9 567 8 556 557 291 34.0 3e-78 MRKAIVTPVAVLAVLVMALTGCGQKNQSGGSKQSGVTSESAPMAQLNVVDRGQLKDGGTL RLAIEQLPTEWNPLNVNGDTADLGTTIWRFVGATNFDITEDGTPKPNPNYIFSTDVETKG GKQVVTLHLNPKAKWNSGRTIDYTDYRATWKANSGFAPDFLPASTDGFNQISSVEKGAKD TDVVLTFKTTYPDWTTVLSTVLPKEGVKDPHTFNDGWKTLNPDWLTGPFIPMKVDEASKT LTVKRNGKWWGDKSKLDTVSFKAMDSATQTKAFANKEIDAASNITTKDGYRTAQKRPDVE MRQAGSLQRRHFTFNTKSTMLSDKKVRQAIVKGINRPAIAKSDLAGLPVSPDTLMLGNHL FMPGQAGYRDNSAGYNYDPEAAKKGLGEAGWKKQGDYRVKDGKTLTINYAKLTGVPTSEN EGALFKQDMAKIGVKVNLVNTPSDSFIQTLSSHSFDVIAFTWGTAYPMANIRQIYGAAAE GSKQPSQSNFSQLLDPEVEKLISKIDTESDVSKRRELANQADKTIWDDVMTLPLYRRMSL TAVPKNLANFGASTFQTVRAEDIGFQK >gi|302034468|gb|GL383167.1| GENE 67 61987 - 62673 456 228 aa, chain + ## HITS:1 COG:SA0036 KEGG:ns NR:ns ## COG: SA0036 COG0584 # Protein_GI_number: 15925743 # Func_class: C Energy production and conversion # Function: Glycerophosphoryl diester phosphodiesterase # Organism: Staphylococcus aureus N315 # 1 189 19 210 210 125 34.0 8e-29 MSAFRAAVEAGIKWIETDVDIIGDGTAVLIHDSSLDRTTNCRGRYNELTASDLPAIDAGR WFSPQFIGEPLPRLADLIDFMNETGVNANIEIKSNEEGARSSLQLRDSVIAELERLKPGR QVIVSSFNHVLLSKFKEAAPQWDVACLYETAALYDDWRSMLELVGATYIHPEDSALTERS VVQFKEAGFRVNAWTVNRADRANQLFNWGVDGVISDVPDLLAGTVAAH >gi|302034468|gb|GL383167.1| GENE 68 62687 - 64111 1052 474 aa, chain + ## HITS:1 COG:YPO1668 KEGG:ns NR:ns ## COG: YPO1668 COG0477 # Protein_GI_number: 16121932 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Yersinia pestis # 34 437 7 401 411 89 25.0 1e-17 METTVLLADPSVSESGKNSRLPVFLRGARAVPFLTVVLAGQLTYSAFEAFKGSLIVPLTE TLGIRIDQFGILMGWLGIAMFLYVPGGWINNRFTVRSILCAWCTWRFVTGLILFSIPNLS FDVMIVIAASWGVWDAIGWPAVVNGVAFMSQDADKKGRGLAMGLLESIRRGVEFLMNVVV IGALALWSGHTTTVMRGFAIAYTLVLVPLIFALLRRVPKNAVAGDTAGKGESANVEALKG LVAVLIKPRMWLAGLAGLCVYWCYVNLIYSSAPYLSLVFKASDAVAGAFGIFNTGLLGII SGLVAGVLADYLFKSSTRMMGIALLITAIGTLAVRLLPVGDGMMWPAMILLMVMAFGIFM GKAVLLAPVAELNLPEHVNGSAMAVGSFLAYASIFWANPLTAGIIEKHRGNAYVGYHQIF MITLVVALGGSMCAFALDLMNMRVKKRDRQAVGIHAVGDVATSPAEPSTVSLRR >gi|302034468|gb|GL383167.1| GENE 69 64101 - 64739 495 212 aa, chain - ## HITS:1 COG:no KEGG:PPA1836 NR:ns ## KEGG: PPA1836 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 212 1 212 212 367 100.0 1e-100 MRPPIIISSHRGRIGVGVIVAVIIVLTILDLIRSGLAGLTNLPALLLFVWLVWIIWGVAE IRIDDEGVNIVNQFRIWDVPWRRITGVTGRWGLSLTAERRPDAEGMRKPRTISAWAAPAR GTATAMKGNADHIPQIIIDSETPMRWSLDSHSTARLIEMERIERHPSGAVASAEGHEAAG SGTKSYDGEIHVHPNWMTICVTVVLVATVIIV >gi|302034468|gb|GL383167.1| GENE 70 64909 - 66228 883 439 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 [alpha proteobacterium BAL199] # 10 437 19 437 447 344 44 2e-93 MLSAFANAFRTPDLRRKILFTLFILAVFRLGSVIPVPNVNVTNINTCVTQASSGSSAGLY SMISLFSGGALLKLAIFALGIMPYITASIILQLLTVVIPKLETLKKEGASGQNKITQYTR YLTLVLGLLQATAFVTLATSGRLFTCSLPVVYSTSVFEVVVMILTMTAGTTIVMWMGELI TDRGIGNGMSIMIFTQIAARFPDSLWSIKVARNGAGQAHAWFIFSMVIAIGLAVMAAVVF IEQGQRRIPVQYAKRMVGRRMFGGSTTYIPLKVNQSGVIPVIFASSILYLPVLYATFRPQ TSAAKWIGHYFTRGDHPVYNIAYFLLIIFFCYFYVAITFDPVEMSDNMKKYGGFIPGIRA GKPTEDYLAYVLSRLTAPGSLYLGLISMIPTLAFVSLHANQNFPFGGTSILIIVGVALDT VKQVESKLQQRHYEGFLSS >gi|302034468|gb|GL383167.1| GENE 71 66225 - 66794 729 189 aa, chain + ## HITS:1 COG:lin2760 KEGG:ns NR:ns ## COG: lin2760 COG0563 # Protein_GI_number: 16801821 # Func_class: F Nucleotide transport and metabolism # Function: Adenylate kinase and related kinases # Organism: Listeria innocua # 1 177 1 204 215 176 47.0 2e-44 MRLLIMGAPGAGKGTQATAIAEHYSVPAISTGDMFRTNIKNATELGKKVKAIMDAGDLVP DELTDAIVVDRLNQDDAANGFLLDGYPRNMHQVEALDAYLKEHGQRLDAVISLDVDPELL TQRLLKRAEIEGRADDNEETIRNRMKVYSSQTEPLLEHYRSAGILVPVDGVGEIDEVRQR IFAALDSKN >gi|302034468|gb|GL383167.1| GENE 72 66847 - 67635 595 262 aa, chain + ## HITS:1 COG:BS_map KEGG:ns NR:ns ## COG: BS_map COG0024 # Protein_GI_number: 16077206 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionine aminopeptidase # Organism: Bacillus subtilis # 1 242 13 246 248 210 42.0 2e-54 MRRAGLVVAEGLEAMRAVAVPGATTADIDRAGRDVLEQHGARSNFLNYGGDWGLPPYPGV ACVSPNETIVHGIPGERELKDGDIVSIDYGAIVDEWHGDAARTVLVGDVSEEARTLSEVT RESMWAGIAKVAPGARIGDISAAVQASLESHDGDYGIIREYTGHGIGTEMHMDPDVPNWG RAGRGPKIVEGMVLCIEPMATLGTEVTATLDDEWTVVTVDGSWASHWENTVAVTSKGLWV LSEPDGGQAELEKRGVPFGPLD >gi|302034468|gb|GL383167.1| GENE 73 67850 - 68071 320 73 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15610598|ref|NP_217979.1| translation initiation factor IF-1 [Mycobacterium tuberculosis H37Rv] # 1 73 1 73 73 127 83 3e-28 MAKKEGALELEGTVVEALPNAMFRVELKNGHRVLATISGKMRQHYIRILPSDRVVVELSP YDLTRGRIVYRHK >gi|302034468|gb|GL383167.1| GENE 74 68150 - 68263 203 37 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843287|ref|YP_056514.1| 50S ribosomal protein L36 [Propionibacterium acnes KPA171202] # 1 37 1 37 37 82 100 1e-14 MKVQPSVKKICDKCKVIRRHGRVMVICDNPRHKQRQG >gi|302034468|gb|GL383167.1| GENE 75 68254 - 68643 66 129 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4885 NR:ns ## KEGG: HMPREF0675_4885 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 90 129 1 40 40 72 95.0 6e-12 MWHPFLVLSTRLLGPRRCPTWSALVIPENDGQCLTVRRGPGLRPGVVARIRARWVRAGFR DVLPRCPEHCPGGLHQRVLAVRLFTCGINVFTAPTWMMGLTVDLRGRTPAFLLTVAMTIC DPVAAWAQP >gi|302034468|gb|GL383167.1| GENE 76 68642 - 69013 619 123 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843286|ref|YP_056513.1| 30S ribosomal protein S13 [Propionibacterium acnes KPA171202] # 1 123 1 123 123 243 100 7e-63 MARLIGVDLPRDKRLEVALTYIYGIGRTRATETLKATGISGDLRVHELTDDQLVALRDHI EANYHVEGDLRREVAADIRRKIEIGTYQGRRHRSGLPVRGQRTRTNARTRKGKRKAVAKK KAK >gi|302034468|gb|GL383167.1| GENE 77 69085 - 69492 693 135 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843285|ref|YP_056512.1| 30S ribosomal protein S11 [Propionibacterium acnes KPA171202] # 1 135 1 135 135 271 100 2e-71 MATAGHKGAPKTKVRRKEKKNVVAGQAHIKSTFNNTIIAITDPSGAVISWASAGTVGFKG SRKSTPFAAQMAAEAAGRRAMEHGMKRVDVFVKGPGSGRETAIRSLGAVGLEIGPISDVT PVPHNGCRPPKRRRV >gi|302034468|gb|GL383167.1| GENE 78 69523 - 70128 1034 201 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843284|ref|YP_056511.1| 30S ribosomal protein S4 [Propionibacterium acnes KPA171202] # 1 201 1 201 201 402 100 1e-111 MARYTGPLTKKSRRLGTDLVGNDKSFERRPYPPGVHGRGRTKDSEYSLQLREKQKARYAY GVLEKQFRRYYEEADRAQGKTGDVLLQILESRLDNVVYRAGLAATRRQARQMVSHGHFLV NGKKVNIPSYRVSTHDIIDVREKSKDLPPIVIARETFETRDVPAWLEVRPNKGRILVHQL PTRDQIVIDVNEQAIVELYSK >gi|302034468|gb|GL383167.1| GENE 79 70374 - 71390 1110 338 aa, chain + ## HITS:1 COG:MT3564 KEGG:ns NR:ns ## COG: MT3564 COG0202 # Protein_GI_number: 15843052 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, alpha subunit/40 kD subunit # Organism: Mycobacterium tuberculosis CDC1551 # 1 337 1 346 347 466 71.0 1e-131 MLIAQRPTLTEESISEFRSKFVIEPLEPGFGYTIGNSLRRTLLSSIPGASVTSIKIEGVQ HEFSTIEGCVEDVTEIILNLKGLVLSSEEDEPVAMYLRKTGAGEITAADINPPAGVTIHN PELHIATLNDDGRFEMELIVERGRGYVSSALNDDPNAEIGRIAVDSIYSPVLKVTYKVEA TRVEQRTDFDKLVVDVETKPSILPRDAIASAGKTLVELFGLTRELNVEAEGIEIGSGPVD EEYAESLGTPVEELNLTVRSYNCLKREGIHTVGELVSRSEQDLLAIRNFGSKSIDEVKEK LTELGLALKDSAPGFDPLAAAEAYDEANDDDYAETEQY >gi|302034468|gb|GL383167.1| GENE 80 71289 - 71534 82 81 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSCHGVGVSPATTPTKSTPNATNNTLATAKKANPRGGCKGVAPLALNKSVLLSLRVIVII GLVVGLSCGEWVKPRSRVFEG >gi|302034468|gb|GL383167.1| GENE 81 71692 - 72228 893 178 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843282|ref|YP_056509.1| 50S ribosomal protein L17 [Propionibacterium acnes KPA171202] # 1 178 1 178 178 348 99 1e-94 MPKPTKGPRLGGSPAHERIILRNLASQLFEHGHVVTTVTKAKRVRPLAEKLINRAKTDTV ANRRFVNRTITDRGIVHILFTEIGPRMEGRDGGYTRVTRIGNRKGDNAPMAVIEVISDKV APKAPASAADAKAQINTATEAKDAEPEAPAEDAAAQAPVADEQKAAEVDEKAEEKPEA >gi|302034468|gb|GL383167.1| GENE 82 72338 - 73555 828 405 aa, chain + ## HITS:1 COG:MT1800 KEGG:ns NR:ns ## COG: MT1800 COG0438 # Protein_GI_number: 15841222 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Mycobacterium tuberculosis CDC1551 # 4 362 1 362 381 188 36.0 2e-47 MTTLRIAQLANFVGPVSGGMKVAIDALGKGYVAAGHERILVIPGPKDRITESESGITVEI AAPRVSAGYRMIATPWRALDILDRFRPTSIESSDKWTLTPAAGWASRRGIGSVLFSHERL DDMLTMWVRRQFGVAAAVGALNRRLSKSFDVVVVTSDYSAGEFADTGARLVKVPLGVDLE TFNPNKREPGLPTPRPDDILRLCYVGRMSHEKSPQLAVAAALELHRRGVPLRLDMYGVGP DTDAMKQQAGDAPVFFNGFVVGRDEVARRFAAADISMSVCPAETFGLASLEALACGTPVV TANRGGAHEIVDVTSGEAGSPDAVGLADATQRLAARLGPELRDAARHRAEQFTWDASVET MLMIHSEIAARPDAKPYWKQRLVNRRNARRDPQDPLAPTDDSQEQ >gi|302034468|gb|GL383167.1| GENE 83 73555 - 74187 396 210 aa, chain + ## HITS:1 COG:no KEGG:PPA1823 NR:ns ## KEGG: PPA1823 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 210 1 210 210 403 99.0 1e-111 MRKIPLVLAGVAAAVTPVVLAAPGPEPAMPDGPAGRPVRTVDDAVAACRASGKAGWELVD EATQLVHRMYTHYSCWHLWLSPETSLAAGHGHSGQYNIVLGKILEQLGFQVRPVHAARVR LDHHPWYHTGHSWLRVIHQGKELDVCASRPGNTAGNVAFVPVTEVLDRTRLNSIDTALAL APIVVASVWKSWLTGSGIQSWMYRPFGLSA >gi|302034468|gb|GL383167.1| GENE 84 74203 - 75576 1087 457 aa, chain - ## HITS:1 COG:ECs0048 KEGG:ns NR:ns ## COG: ECs0048 COG0477 # Protein_GI_number: 15829302 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 42 450 26 433 443 256 37.0 8e-68 MAANIPLTNTASLTPDTQLASAPISPESRRFLRHVTAATAFGGGLDGFDLGVISVVILHI NHDLELTPAMEGLVGAASLLGIFIGAPLFGFLTDKFGRRRMFLVDIIAFIVIGVGQAFAT GGVSLGILRFLLGMAIGAEYSIGAPMLSEFVPARERGSKLAFLELCWRIGFLIAVLLGYA LLWSGVSWKVILATSVIPALIVLGLRIGLPESPRWLLRHGREAEAREIVEKHMGPKYFAA EQLSDESVDGKGYRKLFRKGQRRRTIFVCIFWTCIVTPYFAIFTYAPKVLESLNVKSQAG GTILSNTIGVVGAVVGLLAIDRIGRRRMLIGPFWMQTAVLLIVGLWTDAPPWVLVVGLAL FALVNSYSDILTAVYPSEIFDTDIRSSGVGFGSAVSRIGAFLGTYLLPIGIGTIGVKWCM VIAAGLCVVGAVTGQTLAPETMNRPLTKTATGELSHA >gi|302034468|gb|GL383167.1| GENE 85 75912 - 77321 457 469 aa, chain - ## HITS:1 COG:no KEGG:PPA1821 NR:ns ## KEGG: PPA1821 # Name: not_defined # Def: putative sialidase # Organism: P.acnes # Pathway: not_defined # 1 469 1 469 469 725 97.0 0 MADDGARLLAMQSNFYDTPEVTWASDAAGTPSVTAPGRHGEVTLATLAAPGTKASPDGSS VTVDSTADADGTSASTISSLTASVDLGAEGGVQKVRFVDQHRRGLLTAGGLYDLRVSHAW SHTGTFPITVKLSDGRVLVTSVAVRDGAPAQPTGPVVGPCDKPTVSFPSGSSVRDDSRLG VSFTHLTPNTWVDVLIDGTKIGTVHTNASGSGTQDVPITYQTPSGAHLLRIAGPDGRFVE KVFTVTSKTPPFLNAITSGVTAKASSEASNETAPNGRASAAVDGNPNTFWHSRWEAPVAT YPHTLTVDLGRKYALSAMRWVSRRGNPNGRVKTLVLEFSTDGSHWTGRQPVALPSSSYPT IVSLPKQADARYVRITMASPQDASQPFAAIGEVTFAGLANGHADQPRHDPTAHTWAPPAH CQVTPEPSPTGRPTTIQPTATPASGSTATPTGTASQASTRPTRLPATGR >gi|302034468|gb|GL383167.1| GENE 86 77550 - 81806 2608 1418 aa, chain - ## HITS:1 COG:CAC2514 KEGG:ns NR:ns ## COG: CAC2514 COG1874 # Protein_GI_number: 15895779 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase # Organism: Clostridium acetobutylicum # 447 987 447 975 982 220 30.0 2e-56 MSNQPGPLRGTANLARSKQWLHAFDAIARKHQVTTGGGSLLMYQVENELLDESSDRSAFL KALTSYVRADGITVPLFTNDYSMAGHFSDTSKYGTDFYAYDSYPLGFTCNGKRNALSDHE AEFRAIAPTTPQFITEAQGGAFTPWGAPFTSSACAKFADPAFTRQWGVSTIGNGVTAFNY YMLEGGTNWGWTGAPASGFTSYDYGAALDEERTLTDKFAVQKEIGYFQRALPWLAATNPV SAPEPTDVKGSPVHAYQRTTGATGPRFIGFRLGDSNATTDTTFTTPLDLDSDGSANRQHV VDDRDSAISYQGSWVQRSDPGASGKTLTVSSRKGDTATLAFTGTGISVISGTGTDHGMVS LRVDGDAPVEATGHVDSDQNRPAQKVLHEFTGLSGGRHTLTVTNLGKPAQGGKGTIVSLD ALRVTDDSAADAHGEKPSNPARQWARVPQDTSTTLHLHGRDALMMTADFPIGNHKVLYTT SQPFGAPVVTSGRGTVEYLIGHRGDPGETVLQFKAGSSAPTVRGSGVRTVWNATTGQLRL NYTHTGTPSDIRIGEGDDALTLRVIDRQSARTTWQLESTLNGRTVHTDVEGAYLAGRAVT SGSTVALSGQMAEPGTVSIIPDATITSASWNGRPLPHFTDAPVPGPAAVSAPTLHWVSKT GAPEAAQGYDDSTWKVASSTTERTPWQKPTLGGAALDSNLLGFYEGSVWYRAHFTADTTR TLKLNANGGQGAPKPNGVDPAFMQVWINGTYAGAYRAVGNTTSIELPSSIKAGDPVVLSV VVHNLGQNLDWSDNGLSRQSRGLNSASLPAKGAVTWRVRGALSTEQTGDTARTMYNNGDL YGERAGWYLPGMPDKDWTAATTMTVDHPGIRWYRSTFNLSVPTGQDTTFQVVVKPSGNGK GPGGVGADHSQATIFVNGWNTGVYVGDVGPQTRFVIPAGFINLHGSNTIAVAVAAKEAGS GPASITVEPTHSVTGSLVGDLNKAPAYSPRTPDPATGTVPSLVPLPASLKTDSGAPFTLK DSTVIVAKGQASESAKFLATILRRSTGFPLPIVSSGSGHNSVISLTVDPHTRIGTYTRQE EAYSLVSRAGSMTARAVTSHGLFDAVQTIRQLFPPLIESTRPMMRSWTAPAVTITDAPRF SYRSIQLDPARSFLTVNEVRSVLDVMAAHKMSVLHMHLADDQGWRIQITNKGRAPGDTLD YTKLTSVSGHTAMDTQEYGYRDELGRTGFYTQQQYRSIVAYAAARHIMVVPKIDSPAHSN AMLHAFPELNSANSHPETTVYGTVPQNGTSAVGYSSLDVDNPKTWTALAHIFGQIAQMTP GPYLHIGADESHSTPHDQYVRFVTRVVNLVHSLGKKPVGWNEYSIGGVTAGDAIQYWVGD TENTRRAVRDRGAKLIISKSDAAYLDQKYTPDTAIGLV >gi|302034468|gb|GL383167.1| GENE 87 81803 - 82312 323 169 aa, chain - ## HITS:1 COG:CAC2514 KEGG:ns NR:ns ## COG: CAC2514 COG1874 # Protein_GI_number: 15895779 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase # Organism: Clostridium acetobutylicum # 51 167 45 162 982 139 52.0 2e-33 MRKAEHRHSLSRTMAALTAVACASTSLAATPGTAAATSPSQTPKAMSSTPYIFPGNDGKA HKVAWDKHSFTIDGTRLSIWSGELHYWRLPSQQAWRDVMRKARANGFNAISLYFFWGLHQ ESADGKFDFSGIKDIDTLLTIAEEEGLYVIARPGPYINAEISMGASPPP >gi|302034468|gb|GL383167.1| GENE 88 82295 - 82528 57 77 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLGFAHGRLRHVGEPPRGGRGASVPHAQSKLSAAYGRVSSSAQLGCTFMQSDPIRRTRWC NLGTSLAASGWGRSQRR >gi|302034468|gb|GL383167.1| GENE 89 82559 - 83176 384 205 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent [Streptococcus pneumoniae TIGR4] # 6 199 5 201 201 152 41 1e-35 MAVYTLPDLDYDYGALEPHISGKIMELHHDKHHNTYVQGANTALEKLAEAREKGDFGTIN KLEKDLAFNLGGHINHSVFWKNMSPHGGGRPEGNELAAAIDEFFGSFDSFKKQFEETAKG VQGSGWGMLVWDVMGQRLNTMQLFDHQGNLPSTQIPVVQLDMWEHAYYLQYQNVKADYVT AWWNVVSWTDAEQRFVKARSITGLF >gi|302034468|gb|GL383167.1| GENE 90 83739 - 84005 98 88 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|315093722|gb|EFT65698.1| ## NR: gi|315093722|gb|EFT65698.1| hypothetical protein HMPREF9582_01740 [Propionibacterium acnes HL060PA1] # 1 69 1 68 93 123 86.0 5e-27 MNVSPCRARCRGVGDGFLGTSPGSASPIAHSDDIQRTGMGITKIKLFESRWRLTVRLCVV GRVAPRVVICSGRQGSNKLDRIQRDCYE >gi|302034468|gb|GL383167.1| GENE 91 84058 - 84900 568 280 aa, chain + ## HITS:1 COG:Cgl1972 KEGG:ns NR:ns ## COG: Cgl1972 COG1131 # Protein_GI_number: 19553222 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Corynebacterium glutamicum # 7 280 3 270 285 262 51.0 5e-70 MSNMSDDPTGSRTIPQAAVSVPADTRPPGQPAVMIEGLTKRFGPKVAVDNLTMWVPRGSM FGFVGPNGAGKTTTLSMVTGLLRPDAGRVEVLGHDVWADPAAAKAQMGVLPDGMKTFDRL SGRELLRFCGMLHRLDEATINERAEGLLDALSLTSAADLLVCDYSAGMTKKIDLACAIIA DPAVLVLDEPLESVDPLSGQTIRSILRRFVDGGGTVVISSHVMELVESLCDSVAVIAGGR LHAIGALDDVCQGKSLQNRFVELVGGNANMGEGLTWLRRS >gi|302034468|gb|GL383167.1| GENE 92 84882 - 86495 1112 537 aa, chain + ## HITS:1 COG:no KEGG:PPA1816 NR:ns ## KEGG: PPA1816 # Name: not_defined # Def: ABC transporter associated permease # Organism: P.acnes # Pathway: not_defined # 1 537 1 537 537 869 99.0 0 MVAQVLKHQWATTLVPLRKGAKPAEIFGLIFLVLVSLFLGGNYFAYVRAAGQLAIDPRGA STAVAGASLIVFWITVPVLFGAQPTYTDPSRYAVFSRRARELMPAFVVVGLLSWGGVVTL VASVSHVLAWSSAGAVAMVTAVLGVLLGWSAAMIASNLLLVAMSAVMAKRRFRETMMILV MLLCCGLGLGMQVVTRTATVTRTVPVNVGRIIGWTPLGWAWSMPWEVAHGRWLAFAIKLV VSIATVAVMVWAWQAIVARRLVAPTGDGGSVEKVKAANGIDRMMPATPTGAITGRTLRYL KRAPRMTSLLLNTFLVPLLASAPMLVHGGGEVHGPQTALIFTAIPFAAMLVATPMYAGSL ISYDGTALWHHIESSVTGVEDRRGRAIAYLLVTMPVSLALAVIASWWCGQWKLLPVVSAE ALGVLLLSTGIGSWTSVVNPMRVAESRKGNGFNSGSSVGAGCLGALLGMGAGILVAIPMI ALVVLVAISGHAWWSILLTFVGGLGWSFLVLHVGIVVGGRRLDRTWGEVLTKITPVA >gi|302034468|gb|GL383167.1| GENE 93 86588 - 87349 192 253 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 8 241 4 240 242 78 29 2e-13 MTGLLAGRTALVTGGTAGIGRGIAEVLALHGARVAVTGVTEERCAQAREDGLDVYQLDVR DKKACIRVVNDVAAECGGLSVLVANAGVYPQVRLADLDDDQIDFIFDVNVKGMMHVVQAA TPALRESGRGRIVVTSSITGNITGYPGWSHYGATKAAQMGFIRSAAMELAGDKITINAVM PGNIMTPGLKALGDDYLAEMAKSVPLGMLGEAKDIGEAVAYLASDGARYVTGQSIVVDGG QVLPEGPEALAEM >gi|302034468|gb|GL383167.1| GENE 94 87402 - 88163 455 253 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4871 NR:ns ## KEGG: HMPREF0675_4871 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 253 1 253 270 442 99.0 1e-123 MSRRQHVAVRTSATSRILLIITAMMGLLAFCWPLFLNPGGAADYETRTPFLFAAILPVVL AVVVSQLSSDGIDVKALAMIGVLTACGAALRTISPSMAGISFVFILMIAGARVFGAAFGF VLGTTTMFASALLTAGFGPWLPYQMIASGFVGLGAGLLPRARGRAEIAWLCGWGFVSAFV YGWLMDFAFWPFNLGTSTQLSFDPHASPLTNLWHFVLFNMATSMGWNLGRALTNVVCLAL LGGPILRVLRRAS >gi|302034468|gb|GL383167.1| GENE 95 88160 - 89815 918 551 aa, chain - ## HITS:1 COG:Cgl0519 KEGG:ns NR:ns ## COG: Cgl0519 COG1122 # Protein_GI_number: 19551769 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, ATPase component # Organism: Corynebacterium glutamicum # 18 527 34 543 569 472 50.0 1e-132 MSDVITLSNVSITHPGASTPTLKNINLAVAEGDLTLVVGRTGTGKSTLLGTLNGIVPHFS GGRLDGTVTVAGRDTRTHRPRELADVVGVVGQNPVAGFVTDTVEDEIAYGMEQLGISPSV MRKRVEETLDLMGIADLRRRALLSLSGGQQQRVAIAAVLAAQPRILVLDEPTSALDPTAA QDVLASITTLVHDVGLTVILAEHRLERVMHAADALWWLPGDGSVVQGRPEEVLARADVVP PLAALSRVMGWPTVPLSVREARRRVGPRPGLPRAPQPSEAMTWHGGGDEVLRVETLGVNY GQVCAVDALTTTVERGTITCLMGRNGSGKSSLMWAIQGATKSSGRVLVNHEGSWADPRKA DAATARRMVSLVPQSASDLLYLPTVAEECAQADKESEVPAGTTRAILSRLRVELPEDRNP RDMSEGQRLALVLAVQLSSRPDVVLLDEPTRGLDYAMKTELTRIVKGIAAGATGDPAAVL LATHDVEFAATTTDRTIVMATGHIVADGSTRSVCTSSPGFSPQIAKVFHPADVMTIADVE RLVNTPAGDRR >gi|302034468|gb|GL383167.1| GENE 96 89812 - 90831 549 339 aa, chain - ## HITS:1 COG:Cgl0520 KEGG:ns NR:ns ## COG: Cgl0520 COG0619 # Protein_GI_number: 19551770 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Corynebacterium glutamicum # 5 313 61 347 370 144 30.0 2e-34 MAFTVIIIRVFFQILMGGDGKGTVLFRLPEASLPNWAAGIRLGGPVTAEGLAATGYDALR LAGMLACFGAANSLANPRRILKSVPAALHDISVAVVIALSVFPQLIASAQRVRRARRLRG DTRKGIRALGAVIVPVLEDSVEMSMSLARGMESRGYGRTRDDRRVRPGTRVLLVVSVMAL TLGCYGVLANPTGSFSTDPSTCAPGSLCSWLLMDRMGQHIGTVLIVAGIIGSVIGLRISG RRLGVSRYRPDPWTWQATASCLCGAVAIVAMIWLSRANPKAITVSTSPVVWPPLEPAMLL FVVAAVFPGVFTPAPQRSTQADPEQAASWTSRQDEVPQL >gi|302034468|gb|GL383167.1| GENE 97 90947 - 91162 87 71 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313793307|gb|EFS41365.1| ## NR: gi|313793307|gb|EFS41365.1| hypothetical protein HMPREF9575_00836 [Propionibacterium acnes HL110PA1] hypothetical protein HMPREF9612_01531 [Propionibacterium acnes HL063PA2] hypothetical protein HMPREF9591_02445 [Propionibacterium acnes HL086PA1] hypothetical protein HMPREF9597_02437 [Propionibacterium acnes HL005PA4] hypothetical protein HMPREF9598_01755 [Propionibacterium acnes HL050PA1] hypothetical protein HMPREF9609_00092 [Propionibacterium acnes HL027PA1] hypothetical protein HMPREF9613_02014 [Propionibacterium acnes HL002PA1] hypothetical protein HMPREF9620_00064 [Propionibacterium acnes HL037PA1] hypothetical protein HMPREF9581_01657 [Propionibacterium acnes HL087PA3] hypothetical protein HMPREF9588_01705 [Propionibacterium acnes HL025PA2] # 1 71 46 116 116 120 100.0 2e-26 MAIPQPAAQAHHDHGWTVLVLLGAAATGISMTGSAVLVTNLDTVQRRFQSLSASLPSGTI LVYDQVRHGRR >gi|302034468|gb|GL383167.1| GENE 98 91143 - 91763 291 206 aa, chain - ## HITS:1 COG:PH1642 KEGG:ns NR:ns ## COG: PH1642 COG2813 # Protein_GI_number: 14591412 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S RNA G1207 methylase RsmC # Organism: Pyrococcus horikoshii # 13 201 6 193 198 94 30.0 1e-19 MSQSSHDDHSPTHYFTTPEGPTRTRTIAVNVWDDSMTMTTAGGVFSGTRLDPGTAVLMRS VTPPPSDGTFLDLGCGYGPIACALARACPGSHIVAVDVNDLAIDLTTRNAKALRVGDRVH ACRPEEVDPDLRFDEIWSNPPIRVGKAALHEILTTWLTRLSDEGVAHLVVGKNLGADSLT SWLCEQGFDAARVASAKGFRVIDVHA >gi|302034468|gb|GL383167.1| GENE 99 91760 - 92599 551 279 aa, chain - ## HITS:1 COG:MT3562 KEGG:ns NR:ns ## COG: MT3562 COG0101 # Protein_GI_number: 15843050 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthase # Organism: Mycobacterium tuberculosis CDC1551 # 1 267 21 296 297 204 48.0 1e-52 MTRWRLDIAYDGANFSGWATQPDRRTVQGELETWIPRVLRLDQPTPLTVAGRTDAGVHAR GQVAHVDLPDNVDTSAMLRRLSRVLTPDVVVKSVRPVPSTFDARFSALWRRYVYRLWDES SRPDPVTRFHVAPVRGHLDLDRLNTAGTSLLGLRDFAAFCKHREGATTIRTLLDCHAKRL DDPCGTVEVTVRADAFCHSMVRSLVGALTAVASGRRSQDWLDNVAASTSRASSVLVMPAC GLTLEEVGYPSDEDLAQRAAQARSRRSHNDICDTCWEDR >gi|302034468|gb|GL383167.1| GENE 100 92596 - 93426 586 276 aa, chain - ## HITS:1 COG:PA0382 KEGG:ns NR:ns ## COG: PA0382 COG0220 # Protein_GI_number: 15595579 # Func_class: R General function prediction only # Function: Predicted S-adenosylmethionine-dependent methyltransferase # Organism: Pseudomonas aeruginosa # 42 274 2 223 223 176 44.0 6e-44 MRPDPAPLDPTDASPAQARRHQPGLGVEVSAGAHRSGDRVRRGVVSFVRRSPRMNVSQQR AMNTLASTYLIDVPRDATSTSVAPGSRLDLPAIFGRTAPLTVEIGVGSGDVLAALAAAHP ERDFIGFEVYLPSIATTLNKLENAGASNARVIMADATAGLDHLFGPADLDELWTFFADPW HKKRHHKRRIVNPDTARLVTSRLRPGGLWRLATDWDDYAHWMLEVLSAEPLLKPVDAGPD GFSPRWPERPVTRYENKGLTAGRTIHDLTWRRVDES >gi|302034468|gb|GL383167.1| GENE 101 93728 - 94006 140 92 aa, chain + ## HITS:1 COG:no KEGG:PPA1807 NR:ns ## KEGG: PPA1807 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 92 6 97 97 127 100.0 1e-28 MSTATPVVSCSVTDCAFNDSGCTAFAVTVGGASGQPTCATVTHLDARAGLSSADGRVGAC QRIECVHNDKLMCTAQQVAISDAASCTAYQAR >gi|302034468|gb|GL383167.1| GENE 102 94126 - 95031 693 301 aa, chain - ## HITS:1 COG:no KEGG:PPA1806 NR:ns ## KEGG: PPA1806 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 301 1 301 301 564 99.0 1e-159 MTAPRHGEASDDSDVREDTDHIASALSQRCSSLARRILSGAGMATMVAHTMISAGESPEK WTCDLQAHGVTASGRFVVAQRSHPAQALCQVPAGLPTDVRLEISKDAPEPAIRLLAATLH VLGTITWLTPAQVDHLLATDVLPSEVSIIAGFDDALIGVVAPYRAILHDAMGSTEIDVPA LIDNIPDDKVFPSADDELSALDIVASLGNAHLSQLCDGVRKKTVFGCSCWSRTTHHACPH TVGRVFCADIDRTGLTLMYVNPDQTGAMFIPLEQDATSLTELEAAVTRLPLNSDPVRPTR V >gi|302034468|gb|GL383167.1| GENE 103 95182 - 97338 1104 718 aa, chain + ## HITS:1 COG:BH0785_1 KEGG:ns NR:ns ## COG: BH0785_1 COG4724 # Protein_GI_number: 15613348 # Func_class: G Carbohydrate transport and metabolism # Function: Endo-beta-N-acetylglucosaminidase D # Organism: Bacillus halodurans # 38 629 26 554 556 176 26.0 1e-43 MKRALIAGVAALVGLAALTPPAVADDSVAPVGAHALASAQPRNAGHRLQDIRTRSPQTDP YARYLRAEVPLQPRIPHDPSTQAHPELDAKAQVMLMQGDYGNSFFGNFRANDGFAHNVLN FWQYADYWSPWHGSATARTPQSLYDPATSDWRTRNFEFGVVDIPNPAYTNAAHRNGVKSI ATIYFDPAFRPGLTFKEAFDKDPTSRGCIIAEKLVEMAKYFGYDGYFLNEEEGNLQDSRF RPFMSYLTSKGLYTQWYTNTPGTWSSSKASLLDHGRIMNSVFLNYNWPGTQDRSVEAAKA EGYDPYQSLFFGVEANQAGFNGKHRSATELPSLYESRRNHSPKASVALFTPSDMYQRGLA DAVKPKGADKDVPLFQQDPYQWMVAERERMYFSGVTSNPKDTGAHPGHSRPEVGVADSSS WVGAADFIPARSVIGGRQFHTDFNTGHGMKWYSAGDVSAAASWTDMDAQSILPSWQWWID TEGTRPSVDFDYGPSDRRKDVHGAPVSLLYHQVGAWCGGSSLVVHGMMSKTTTLRLFKTR LAMTADTSMPITFRKSSKDHGTMKAALVFADDPGRVVTVDVPGSGVKGGWHTSTLRLGRF AGRTLTTLGLQFAPAPDYQMNVGAISVRDGSGVPAAPSEVQLDTVYDDGQAILSWHAAPF DDVAGYVVESMGPDGKIVHLASGYTDLAYLKAVPKKTGKVTFRVRAVGHDGQMSAPRR >gi|302034468|gb|GL383167.1| GENE 104 97335 - 97907 145 190 aa, chain + ## HITS:1 COG:no KEGG:PPA1805 NR:ns ## KEGG: PPA1805 # Name: not_defined # Def: endo-beta-N-acetylglucosaminidase family protein # Organism: P.acnes # Pathway: not_defined # 1 175 719 893 1082 342 98.0 5e-93 MSYDYSAQPRHIKVAEAATASKLLTDAVRPGVLDVTWDAKGVRVSTCRVDVHLVDIAKDD IDNQPYGLDVPCAAGGARVPVPIREGHPYDLTVTAGHGLGLSYRGHTHDSWAAPVTLDDI VVERKRSGFHMRNLTSPDWYGLQIMWKGTDGTSRKLTTIRRGGSVRGGWGTAPTTPPLSI PSPRPRGLSS >gi|302034468|gb|GL383167.1| GENE 105 97838 - 98422 175 194 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4862 NR:ns ## KEGG: HMPREF0675_4862 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 6 194 176 364 364 286 100.0 2e-76 MGHCPDDPTAFHSFPSSQGTLIMKVTDYAGNTTTQHFAVKNNDLVRPAIAPRFTVVEPAR QRVTVSHPIIPVRISVSGDQPVSWRLRGALPAGLRWTNDMSVNGLTSLAATLSGSPRSAG NHRIVVEASDLFGNTVTRSVVVEAARGSAPSSSGGSSGPSASASADSAIRPGWDSSSSAS SGSTRPVRMPLTGC >gi|302034468|gb|GL383167.1| GENE 106 98644 - 99129 764 161 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|213961349|ref|ZP_03389627.1| ribosomal protein L13 [Propionibacterium acnes SK137] # 15 161 1 147 147 298 99 1e-79 MRDPTYGTEFEKVPVTTYSPKAGEVQRKWYVIDAEDIVLGRLATTAANLLRGKHKPQYAP HIDTGDFVVVVNASKIALTGKKATDSLRYDHSGRPGGLRVTSIGEMLAKNPRRAVERAVW GMMPKNKLSRQQLKKLKVYGGPEHPHAAQNPQPYEITQIAQ >gi|302034468|gb|GL383167.1| GENE 107 99152 - 99673 880 173 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|213961461|ref|ZP_03389739.1| ribosomal protein S9 [Propionibacterium acnes SK137] # 1 173 1 173 173 343 99 4e-93 MTDTPTENLENTEVTPFTEGDREIAYRTDSNPTVAAGDSKRPAMIAPGAATGRRKEAIAR VRITPGSGQWKINGRTLEDYFPNKVHQQIVTEPFATAGVEGAYDVIARIGGGGVTGQAGA LRLGIARALNNVDPEASRPALKKAGMLTRDARVKERKKAGLKKARKAPQYSKR >gi|302034468|gb|GL383167.1| GENE 108 99900 - 101252 1225 450 aa, chain + ## HITS:1 COG:Cgl0567 KEGG:ns NR:ns ## COG: Cgl0567 COG1109 # Protein_GI_number: 19551817 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Corynebacterium glutamicum # 1 444 1 444 447 412 58.0 1e-114 MARLFGTDGVRGVANQDLTAELALDLSVAAAHVLGEAGAFGHRQPTALVARDPRASGEFL EAAVCAGLASAGVDVLRVGVIPTPAAAYLVNEYRTDLGVMLSASHNPMPDNGIKFFSRGG VKLPDDLEDAIEQRMGEPWARPIGDKVGRIRYTPQAVDTYVDHLVRSLRQQDTLKGMKIV LDTANGASFHTATAAFTTQGAEVIAIHDQPDGLNINERCGSTHPEKLQAKVVEVGADMGL AFDGDADRCLAVDHEGNIVDGDHIIAILALALQEDHRLASNTVVATIMSNLGLIIAMRAH DIHVDQTKVGDRYVLESMNANGFSLGGEQSGHVIMSEFATTGDGVLTGLHLAARVARTGK TLKELASVMTRLPQALINVRGVDKLRAGIDPDVNKAVADANQKLGDAGRVVLRPSGTEPV VRVMVEAGTQEEADQICSELAETVKMSLAL >gi|302034468|gb|GL383167.1| GENE 109 101364 - 102011 407 215 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4858 NR:ns ## KEGG: HMPREF0675_4858 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 215 1 215 215 400 100.0 1e-110 MSQVATTAIGDIPLVLIAEELGGHHRDDWELVADELVTRMVRSLFDGATRLTDATLAAHV VVKVVGNQERAGRSFDYARPFVSNVTGQTVPGLVVALAWFDGDVELLNDAALAEVKDLDA AYRLGTERLASALVGELSFSRDGDVLVVAGSSWLVSSWPLAKGVGRPIANEFGDSVVVGI EAPDHVVVAPPGCEGQIDQALAASRIADPFPWHVM >gi|302034468|gb|GL383167.1| GENE 110 102056 - 103039 854 327 aa, chain - ## HITS:1 COG:MT1124 KEGG:ns NR:ns ## COG: MT1124 COG1072 # Protein_GI_number: 15840531 # Func_class: H Coenzyme transport and metabolism # Function: Panthothenate kinase # Organism: Mycobacterium tuberculosis CDC1551 # 14 327 5 312 312 313 53.0 2e-85 MNLTPTTPVDDDNTEPGPFIELSRESWAALSDSTEIDIDEATLDHIRGLGDPTSHRDVVE VYRPLTQLIHLYCMHTGALFDASNNFLQLTRHGMKRTPFVIGIAGSVAVGKSTVARLLRE LLGRSPRRPVVDLVTTDGFLYPNRVLEERELLSRKGFPESYDRKALLRFVVDVKSGMPEV TAPVYSHVTYDIVPNQQLVVRQPDILIIEGLNVLQPPRPRSSGTMGLALSDFFDFSVYVD AEEADIIRWYINRFLTLRQTAFTDPHSFFGEYARMPDNEAITIAKEIWDTINGPNLVQNV LPTRGRATAILHKGPDHEVRNVWIRKV >gi|302034468|gb|GL383167.1| GENE 111 103170 - 104183 813 337 aa, chain - ## HITS:1 COG:Cgl0080 KEGG:ns NR:ns ## COG: Cgl0080 COG1075 # Protein_GI_number: 19551330 # Func_class: R General function prediction only # Function: Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold # Organism: Corynebacterium glutamicum # 92 315 91 308 324 92 31.0 8e-19 MKKNWLLTTLLATVTIAMGTTTTAFASPPTDITPEHPGGVTAPHSPDGIPSNIEGPSTPS WTSAIRFAMKNPGAKVPGTNDFACKPRKGTHPVVLIPGTSEDAFITWSYYGPHLKAAGFC AYTFNYNPETHPLVEAAETSGNIYSTAAFMAHFIDRVLKTTGAQKVDLIGHSQGGGPLPR AYIKYYGGAKKVHHLVSLVPSNKGTSMLGLEKFLNASGNPLNTIFNAVAQFHNLGSLPQQ LQDSTFLRELNADGMTVPGITYTVIATRFDNRVFPWTNTFINEPGVKNIVIQDVCPLDHS AHTNIPYDPMTFQIVINALDPERAAPVICTIRPFRPR >gi|302034468|gb|GL383167.1| GENE 112 104089 - 104328 112 79 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|282855140|ref|ZP_06264472.1| ## NR: gi|282855140|ref|ZP_06264472.1| hypothetical protein HMPREF9206_0375 [Propionibacterium acnes J139] hypothetical protein HMPREF9206_0375 [Propionibacterium acnes J139] # 1 79 1 77 77 130 88.0 4e-29 MSVGGLAKAVVVVPMAIVTVARRVVSNQFFFMDLLRCICIYGCWLSCRQGVRRWPHDKVW GLRYEGPTVGLGRYQVISR >gi|302034468|gb|GL383167.1| GENE 113 104318 - 105337 825 339 aa, chain - ## HITS:1 COG:Cgl0080 KEGG:ns NR:ns ## COG: Cgl0080 COG1075 # Protein_GI_number: 19551330 # Func_class: R General function prediction only # Function: Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold # Organism: Corynebacterium glutamicum # 83 314 78 304 324 75 29.0 1e-13 MKRSKRIAAALTSLTTIVATAFATISAAPAHAADSDTSVPPEITMPGSPDGIPSAGNGPI KLFTYPASVYALAHPGTNPQGANNFSCKPREGQNPVVLLPGTNSDAYASWSMYAPKLTKL GYCVFSPNFNGLKLLPNFAYTGDIRVSAKAVSGFVDRVLTATGSKKVDLIGWSQGGGPLP NYYITKLGGDKKVSKLIALAPSNHGVGPRAVSRFVNESISEAKHKKIEATFAKAHIASYE QQLGFSNFNKELYGNGPVTRPGVKYTVIEGRYDDAVVPFTNAFLNEPGVKNILVQDTCRN DHASHVNFTYDVNVYQMAVNALDPDHAQPVTCVFQPFIG >gi|302034468|gb|GL383167.1| GENE 114 105513 - 107360 1603 615 aa, chain + ## HITS:1 COG:Cgl2219 KEGG:ns NR:ns ## COG: Cgl2219 COG0449 # Protein_GI_number: 19553469 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains # Organism: Corynebacterium glutamicum # 1 615 3 625 625 768 62.0 0 MCGIVGYCGHRQAERVIIDGLRRLEYRGYDSAGLAVVADGNLYRAKKSGKLTHLEEELAV HPLPESTQGIGHTRWATHGAPTDENAHPHMSFDGRVAVVHNGIIENFAALRAELESEGIT FSSETDTETAAHMLALEMQRRSSLTEAMGAVASRLEGAFTLVAVSPDAPDTVVAARRNSP LVVGLGQGENFLASDVAAFIEHTREALELGQDQIVVLTPDGVTVTDFEGNPSQARPYHVD WDLSAAEKQGHDWFMRKEIFEQPRAVADTLLGRWSDRGDLVLDEVHISPEELRRINKIVV VACGSAYYAGMVAKYAIEHWTRVACEVDLASEFRYRDPIIDPMTLVVTVSQSGETADTLM AIRHAREQHAKVIAICNTNGATIPRESDAVIYTHAGPEIGVASTKGFLTQVVACYLLGLY LAQVRGMKYGDEIRGVMSELDQMPGKIQEVLDEIEPVYELARVMAKEEEAVFFLGRHVGY PVALEGALKLKEIAYMHAEGFAAGELKHGPIAVIEEGTPVFVVVPPKGRDQLHDKVVSNI QEIRARGARTIVLAERGDDDVKPYADTFVGLPACSTLLQPLVAAVPLQAFACELATAKGH DVDQPRNLAKSVTVE >gi|302034468|gb|GL383167.1| GENE 115 107347 - 107565 100 72 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSEHLADHPRVALYSSLPPGDVADVHPDSDDHRVKIRGPVSSEHLATAARRTNGTSPKVS PGAPSLSELTPP >gi|302034468|gb|GL383167.1| GENE 116 107470 - 107817 278 115 aa, chain + ## HITS:1 COG:BH0518 KEGG:ns NR:ns ## COG: BH0518 COG0736 # Protein_GI_number: 15613081 # Func_class: I Lipid transport and metabolism # Function: Phosphopantetheinyl transferase (holo-ACP synthase) # Organism: Bacillus halodurans # 1 114 1 115 119 61 34.0 4e-10 MIIGIGVDVCDISRWEAAVQRHPGMVRKMLTHTEAVMPARSQAARFAAKEALYKALGGGE GLSWQDCEVVTDGEAVRFELRGSLARRAEELGVRRVHLSLTHDAGVAVAMVFCEG >gi|302034468|gb|GL383167.1| GENE 117 107908 - 109353 415 481 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225086616|ref|YP_002657886.1| ribosomal protein S15 [gamma proteobacterium NOR5-3] # 6 473 11 491 497 164 32 3e-39 MASVCTAEATRAAEQRWFDAHPGQDLMDIAAQAVARKAQELLLGGAVDEIMPDWAASQCV LVLVGGGNNGGDGLFAAAALAQRGWRVELAQVMGQPHEAGMAAALDAGCIRVSLGEVTSH SYDLAIDAVLGIGGRPGIPQSLERIDTWLRARQIPVLAVDLPSGLDANSGEVESCVHAAY TITFSSLKWCHIAHPAARYCGELEVHDIGLDFVDDDGECLDDVDEYCDLAEMASLWPVPG ALDDKYSRGVVGIDTGSEKFPGAAVLGVLGALRTGPGMVRFSGPSAIMAFILSRAPSVVI GEGRVQSWVIGSGWGTHDGNADRFSQRAAEGVPMVIDADALALLPAELPEGCLLTPHAGE LARMLRIERSQVVADPRGSAVRAAQRFGATVLLKGSIQWVARPDGGVRAALPGPAWTAQG GSGDVLAGMCGTLMAAGLPADDAALCAAGMQAATAISMPGPYAPDQIAELLPGTVTTVLS R >gi|302034468|gb|GL383167.1| GENE 118 109397 - 110536 681 379 aa, chain - ## HITS:1 COG:Cgl0462 KEGG:ns NR:ns ## COG: Cgl0462 COG0438 # Protein_GI_number: 19551712 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Corynebacterium glutamicum # 1 371 1 374 407 325 44.0 7e-89 MRVAIITESFLPQVNGVTNSVLRVLEHLSTHDHDAIVLAPGDAQTPHEYAGFPVIPLASL HWPGYQDVRVSTSPQWTMERYLSEFEPDVVHLAGPFMIGYKGAMAAASLRIPIVAIYQTD IPSYAGRYGLGKLEFYGWYRVRQIHSLAVATYAPSTFSRDQLVSHGVPRVDIWGRGVDKV RFHPSKRSQQLHDEWAPNGEVVIGYMGRLAAEKRVADMTNLADIPNTKLVIVGDGPARAE VEKQLPHAVFTGGLGGEDLPRAVASMDVFCSTGELETFCQAVQEAKACGLPVISPRKGGP IDLIDPSRTGWLYEPGDMTDFRSRVVDLVGDDYKRHAMGIAARASIENRTWENLCAELVE HYKEAIRLAGRSTRIRAVL >gi|302034468|gb|GL383167.1| GENE 119 110907 - 111131 62 74 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTMAVDRSKGDRRLNTRAQERRMMPDCRHTTRNRGHQSWGYNPNNDLFDVHRTKMQLTSS CDSSPNSVYHCYPC >gi|302034468|gb|GL383167.1| GENE 120 111130 - 111825 302 231 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 16 229 7 221 223 120 33 4e-26 MEVSAGGGSIVVSGVSHNFSTTHNRNLVLDDVTVSMQPGVMTLLHGVSGSGKTTLLNIMS GLLKPTSGTVFVEGSDIYSLSTSERDDIRLNRIGMIFQEHSLIVDFTVRENVELILRVRG FGSRSRVMAIEALERVGIAHLQDRYPRQLSGGEAQRVGIARAIAGDRPILLADEPTGQLD RRNSQMVFELLRALAEDEKGRTVVLSSHDPTAKEYAHRSCELVDGHLEDSC >gi|302034468|gb|GL383167.1| GENE 121 111825 - 114164 1036 779 aa, chain + ## HITS:1 COG:no KEGG:PPA1789 NR:ns ## KEGG: PPA1789 # Name: not_defined # Def: putative ABC transporter-associated permease # Organism: P.acnes # Pathway: not_defined # 1 779 1 779 779 1365 97.0 0 MWVWNLAALMLRSRKSWLRMVPMAVALLIMTVSLGVNRSINLSPEQSVTSTLGAADGLVS PGFSVLAGSSSPTVPINRWKVRQINPYLETQVSVKGLPEEVLYQESSMPGINTKGRYALI SGKWPTKPSEIVVTPSLRQGIGGKNKLVLEPGNYDLTIVGTVGATFDKSSREILARSGTW QAWPLTQKQAKISGLSGNYLIFFTSSDSAGTCSKVNDDLGSDPLDSDACTTREQLLSKEF APLSGKKIVEQYLAWFLVAGLGAGLAAAAATTSARRIIAPLTAMGVPRRKLALSLRVVTL FMSMATAAASLVTGELLVIAIRPLLARFSDNPLSPVSSPTMSAVTCLGAAIVTAVVMVTP SSQRERKVHGKRINVKMARLLAWSGAIVACALLVWASVAAKVSLISVAIVSALSSLAAGL VTPWLLALVSGRDVSPGRRLAASRALRSRGSWHGLFAGLTAGLVAATATGLLIVASLFAQ MNATSSTGIPHGMAYFLAEPGFSPSLPGNLVKQFDDDLHGARKVPMTYGSSDDRAGNSVA WWAFHNVDDVASIFPLTDRQRRQLQTAGSLRVTTDEQASSTEITVPRDLGWLGQIKVIGH GYTPPAKSSDSSVSRGFLYVGLSPNQEDTAYHWATTHHIDPSYVMAPRMAPKVPLPAATL VATGLFTMMTVIMAGSLARDERLAQRRLTAHLRRLGLTPRWVDGVIFFEVAMTCVVAVIA GTIGSLLALLATSRIMSGTMDLVHSGWWVVAALVGSVMVGSTLGATIHRPYSWNTTISD >gi|302034468|gb|GL383167.1| GENE 122 114516 - 116618 1583 700 aa, chain + ## HITS:1 COG:Cgl1415 KEGG:ns NR:ns ## COG: Cgl1415 COG0513 # Protein_GI_number: 19552665 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Corynebacterium glutamicum # 231 665 4 435 448 332 45.0 2e-90 MSNKKRNPKSFKADGSPKRRWTAAERAARGHKPRTRGGVRNGHTDSRGRNFEAWTPREDV RRDDAGGSRDRRFSQDRRNHEWSDGRQDRRYDRRDWDRRDDRRWPDDGEFRSHKSRRPGH HANRDWKRDDRRGSSWDRDDWREDRRGQRRDRDDHWDRRNGGRDFDRRDSRNWREDRHSW RDDRRDDRWPDRSDHRRDDWSRDDHDDDNMDWEATELTDLDVTGIDHEGGFSALGVPDEI VAALAKTGITDPFRIQIAAIPDAIAGRDVLGRASTGSGKTLAFGVPLLSRLSATPREDNR PRALILSPTRELAMQIADVLSSLASSMGLSTILIAGGMSYGPQTKAFKRGVDLVVATPGR LVDLLETGDADLSGVAVTVLDEADHMAELGFMEAVGSILDAIPADGQRLLFSATLDGAVN KLVRRYMHEPVIHEVDPDKGSVATMTHHAFQIKPHEKVGLMCEIANRSGHTIVFARTQRG ASRMAEQLREAGVMAGALHGGLTQGARARVLAAFKDGSLPVLVATDVAARGIDVDDVTLV LQVDPPMNFKDYLHRSGRTARAGHDGAVVSLVLPHQRRTMARLYRQAGVKPVEAQVTRGD DHVAEVAGCSPALGAPIDEKDYEALVAPKQQRGKKARDGKPRRGKGGRNRGGRGFDGGRH RGHDSRDHHDRGHDSRGHNFRGRDRRDIEAKYGRSGNDTW >gi|302034468|gb|GL383167.1| GENE 123 116628 - 117341 274 237 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4843 NR:ns ## KEGG: HMPREF0675_4843 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 237 1 237 237 433 100.0 1e-120 MASTPRRRWAWVLLLVVASLVIVGVYRKAVPQEGSTAYGQAAEALGDLPVKGRAPMTGYS RDQFGPAWSDNSDPALTHPWGHNGCGTRDDALARDLVGAKLKSGSRCRIVSGELHDPYTG RTIQWRRGRNTSAVVQIDHVVALGNAWVTGAQQLPMDRRQALANDPLNLLAVEGQANQNK GAGDAATWLPPHKSYRCDYVSRQIAVKRKYHLWVTSAERNAMIRVLSTCPNHALPAR >gi|302034468|gb|GL383167.1| GENE 124 117520 - 118413 820 297 aa, chain + ## HITS:1 COG:ML0377 KEGG:ns NR:ns ## COG: ML0377 COG0802 # Protein_GI_number: 15827106 # Func_class: R General function prediction only # Function: Predicted ATPase or kinase # Organism: Mycobacterium leprae # 129 252 11 141 161 100 50.0 3e-21 MDKQTSLQEAIPELAVAVPQDAAALARALDLEAQTVSTWLTQGLGIVARVGSQIVGLAHL VDDGGHADVTDLALTTPDDADVVAALIGGAEQIATELESRVLVVSGLKASPGPAYHYNSG WVRVLPTRVVVPTAEAMHAFGAALAAQLRAGDIVLASGDLGAGKTTLAQGIGRGLGVDGP VISPTFVLARRHAGSEGRPGLVHVDAYRLGSAAELIDLDLDETMDQAVTLIEWGAGIAED LGGSHLDVDIRRSGDPADETRVVYLEGFGPRWQDVDLSLLSELPLDTISPDQTGDNN >gi|302034468|gb|GL383167.1| GENE 125 118413 - 119072 296 219 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15827107|ref|NP_301370.1| putative acetyltransferase [Mycobacterium leprae TN] # 3 210 2 219 359 118 38 2e-25 MNTIVLGIDTSTAVSVGLARGSEVLVSLHYDDPRAHAEQLMPLIHRGCEEAGIALTDIAE VAIGVGPGPYTGLRVGVATGRVLAHLAGLTPHPVCSLDILARQWAGVDGEFVVCTDARRH ELYWARYDASGHRLDGPNVTRPEDLPKDLPIGGPGCLVRGLTPTPGSPEHLDAGVLAASW QAMPDVGLEPLYLRDPDATVPTARKATLTPTRLTLPGLR >gi|302034468|gb|GL383167.1| GENE 126 119069 - 119539 213 156 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227881166|ref|ZP_03999028.1| (SSU ribosomal protein S18P)-alanine acetyltransferase [Halogeometricum borinquense DSM 11551] # 1 142 32 176 181 86 37 9e-16 MMTRPARMADLDAVMAVEQASFDPAWSRASWAEGIAPADHRLTLVAGDDEVAAVATFHGF DVADLDRIMVTPAARGRGLAVELLARGLDWATSRGCHTMMLEVRRDNDPAISLYRRFGFE TISQRPNYYGGGIDALVMSVDLPRAETTTPSEENHV >gi|302034468|gb|GL383167.1| GENE 127 119532 - 120575 717 347 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229232313|ref|ZP_04356740.1| (SSU ribosomal protein S18P)-alanine acetyltransferase [Cryptobacterium curtum DSM 15641] # 2 336 515 850 860 280 48 3e-74 MSEPLILGIESSCDETGVGIVRGNDLLANEVASSMEQHVRFGGVVPEVASRAHLEAIVPV LDKAASTAGVDLSELDGIAVTAGPGLAGALVVGLSAAKALASWLNKPLYGVNHLAGHVAV DLLEHGELPMPCGALLVSGGHTSLLRVNDIATDIIEVGSTIDDAAGEAYDKVARVLGLPY PGGPVIDKAAAEGDPTAIRFPRGLTARHDMVKHRFDYSFSGLKTAVSRWVETQQRDGVEF RIADVAASFQEAVADVLTAKAVDMCQEYGLTHFLIGGGVAANSRLRTLLAERMADAGVEL RRPRPGLCTDNGAMIAALGVQVIKAGLPASAMDISADSGLPIETVLV >gi|302034468|gb|GL383167.1| GENE 128 120689 - 121180 509 163 aa, chain + ## HITS:1 COG:XF1262 KEGG:ns NR:ns ## COG: XF1262 COG0494 # Protein_GI_number: 15837863 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Xylella fastidiosa 9a5c # 3 162 10 166 168 193 60.0 9e-50 MMTPILTTLGFVMHPDAERVLMVHRIARPGDEQLGKYNGLGGKVEPGEDVVAGMRRELRE EAAIEVDAMRLRGTVSWPGFGRHGEDHFGFIFVVDSWHPLADAIPDANEEGPLTWERVDS LDELPMWEGDRYFLPLVFDPDVPQFHGCLPYHDGRPTGWSYSV >gi|302034468|gb|GL383167.1| GENE 129 121306 - 122475 1004 389 aa, chain + ## HITS:1 COG:AGl2862 KEGG:ns NR:ns ## COG: AGl2862 COG0614 # Protein_GI_number: 15891542 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 12 388 7 374 377 263 36.0 6e-70 MNVTRTLGAIATIALTLGLGACAGGAQEKASSGHTPALSVTDVAGRTVSFDAQPKRILLA EGRALMVTSVLNKENPAKDVVAIGADLHKAAPSFESALRQARPQVSKLPMIGSIAKGDVT VENMLSFKPDAVVMTLDQKEAAEKAGFLQKMDRAKLPYVFIDFRRKPLENTTKSMATLGK IFGGKAVSRAKEFNKFYQSKVDDVSRRVSRDSDKPRTFLWRAAGLKDCCSTYANLNLGDV ITAAGGHNLGADLLWTSAGDVTPEKIVATQPEHIIATGGSWAKDPKKPESVPHVELGYNV TDDDAQRTLAGLLKTPGFSLLKAPKDGKLHAVYHQFYDSPFNVFALEQFAAWQHPKQFKG VDPTKDFAKFHEDYLPFGYRGVFFVTLKK >gi|302034468|gb|GL383167.1| GENE 130 122498 - 123577 869 359 aa, chain + ## HITS:1 COG:MA2149 KEGG:ns NR:ns ## COG: MA2149 COG0609 # Protein_GI_number: 20090992 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Methanosarcina acetivorans str.C2A # 13 353 11 352 355 253 43.0 5e-67 MSLAREDPATGMVAVVRGYYRRARWKRWAIVLLSVIAVAAFLVTIVVGPVDITLPQLLRA LVNPSTVDAQTRMVLWQLRIPSSVMAVLIGVCLSLAGAHMQTILDNPLAEPFTLGISAAA AFGAAASIVLDWTIIPNSQFNVAVCAAVASLVAVAIVAAVSRRREDGRESMILLGIALVF GFHALLALLQYRATPEALQQIVFWTMGSFQRATWTSNAIIAAVLAIAIPITIRHSGQLTA LRLGDERAAAMGVNVPRLRSRILILASLLAAVTVAFAGVIGFVGLVGPHVARILVGEEQR YFAPASAATGAFLLATAHALSITIIPGVAIPIGIITALVGVPVFVSLILTRHRVFGGAS >gi|302034468|gb|GL383167.1| GENE 131 123574 - 124326 185 250 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 17 220 27 247 563 75 31 2e-12 MNIRLSNLHLSYGQRHVLDGVSLGPLERGTVTGLLGPNGAGKSTLIKAIAGLKTPTSGEV IISDDDGHVSGAQLRDVVGYLPQDVLATASLTVLESVLTSARSRSKATVERAAHVLERVG IAHIAHRFISQLSGGQRQLVALAQMVVRDPQVLLLDEPTSALDLHNQIEVLRLVRRAADS GHRMAIVALHDLNLAACYCDRLVLLHEGGVHAEGSPSEVLTPDVLERVYGFRARVLSDGG IPVVRPVVTA >gi|302034468|gb|GL383167.1| GENE 132 124600 - 124764 57 54 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MMVTPATTSCPEPSGSTKDSTKVNKPGVTMIAIKSSAQLMFVWASQLRGSVRDA >gi|302034468|gb|GL383167.1| GENE 133 125035 - 126234 573 399 aa, chain + ## HITS:1 COG:Cgl1200 KEGG:ns NR:ns ## COG: Cgl1200 COG0500 # Protein_GI_number: 19552450 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Corynebacterium glutamicum # 7 381 9 381 387 107 30.0 6e-23 MDYTVARRLVSSEGRKALELAGAEADPDSLLAATRLRQQIDGDLAAAVLDQISLRRRAVA KIGPVAASMLWTRDGLEQATRGDVSRWRAHRLKEAGFTHVVDLGCACGADARACLDTGLE VTAAEIDPVTAELARHNLPEAHVMCADAMAVFADFRARGNTVVMLDPARRTGRGRTWRLE DVQPPWSFVVTVLESVPAVVKLGPGVDRSQLPDLPVTYVGHRGDLVEATVWSGFEDQWPG DRAVLIEPAGIHELPGGSPAPAAGELGTFVAEPHPAAIRAGSLSAIDGSLHAVSEGIAYL TAEEPVASPWLTWFAVKEVLPLDVRALRSWVHHHHVGTVEIKKRGVDVDPVTWRRKLKPS GPNRVTVVCTPTTGRTKALVCDRVRLPCGLLGAGSDVMS >gi|302034468|gb|GL383167.1| GENE 134 126239 - 127033 312 264 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4832 NR:ns ## KEGG: HMPREF0675_4832 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 263 1 263 264 424 91.0 1e-117 MLTTRRSATYFFALLLAPLVLLSGCGKFNAGFVIKDEDHIDGTVAFGVLKSSVDRDGSGQ SEGLAKRLRGCSELTPPNASLTGKVKVKPFDDGTYVGCTVTGTMTATDITVQSGRPHSVA DPSTDVFRGHKENGPIGITFDNEIIRFHLDRSALFDFVPGVNSSGVGDMAGIGDFKVSVT FPGTVLSHSGSSKVDGDTVTWTDVSDLLSPDGLTASGKSQGGLPGWVWGIGALVTLASGG AVAAMIINRRWWARPRDGGAAPGS >gi|302034468|gb|GL383167.1| GENE 135 127158 - 128156 448 332 aa, chain + ## HITS:1 COG:no KEGG:PPA1774 NR:ns ## KEGG: PPA1774 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 331 3 333 334 488 91.0 1e-136 MLNASRHMRRCLVLIIAPLLLLAGCAKFDTAMEIKDENHVHLKSTVGVSKSIASTSDDPL VSELSDCNNSKGSAGTGSDGKVEKFEDDNYIGCIIAGETTAANLDKEVGMQITFDKNEVS FKMTSDLFRDSGRSDRTPDASMFSDFKVSVTFPGKVLSHSGSSKVDGNTVTWTDPNDLLF GSGLTATSKRSNGIPTWAWIVVAVAVLAIVGIVVVILNKKKGQKAGQPENGGAPWTMQYP GDGQPQGQPQQWNGQLYQGDPYVQPPYQDPSYQDPRQQEPGQHWGNQPLGHVSGGATSAP QTGQNPIPYQGSQPGQQPPSNPDDFWKNHSSC >gi|302034468|gb|GL383167.1| GENE 136 128387 - 128683 400 98 aa, chain + ## HITS:1 COG:Cgl0581 KEGG:ns NR:ns ## COG: Cgl0581 COG0234 # Protein_GI_number: 19551831 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Co-chaperonin GroES (HSP10) # Organism: Corynebacterium glutamicum # 5 98 11 104 104 137 75.0 6e-33 MATTIKPLEDRVLVQPLEAEQTTASGLVIPDTAKEKPQEGKVISAGPGRVDDKGTRVPMD VKEGDVVIFSKYGGTEVKYDGQEYLLLNARDILAVVEK >gi|302034468|gb|GL383167.1| GENE 137 128695 - 130290 1499 531 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 [Haemophilus parasuis 29755] # 1 530 1 532 547 582 55 1e-165 MAAKQLQFDEEARRSLERGVDTLADTVKVTLGPKGRYVVLDKKWGAPTITNDGVTVAKEV DLTDPYENLGAQLAKEVATKTNDVAGDGTTTATVLAQALVHEGLRAVASGANPVGLKRGI EKAVDAVVEELRSISRAIDTTSDMASVATISSRDETIGALIAEAFDKVGKDGVITVDESQ TFGTELDFTEGMQFDKGYLSPYMVTDQDRMEAVIEDPYILIHSGKISSMNDLLPLLEKVI AAHGSLFIVAEDVDGEALSTLVVNKIRGTFSSVAVKAPAFGDRRKAMLQDIATLTGGQVV APEVGLKLDQVGLEVLGRAKKVVVTKDNTTIVDGAGDKADVEGRVIQLRAEYDNSDSEWD REKLQERIAKLAGGVCVIRVGAATEVELNEKKHRIEDAVSATRAAIEEGIVAGGGSALIH AAHVLDGDLHLEGDEKAGVQIVAKAVREPLRWIAENGGEPGYVIVSKVAEMEPGHGYNGK TGQYVDLIADGVIDPLKVTRSALANAASIASLLLTTETLVVDKPEEDNEDK >gi|302034468|gb|GL383167.1| GENE 138 130629 - 131198 381 189 aa, chain + ## HITS:1 COG:no KEGG:PPA1771 NR:ns ## KEGG: PPA1771 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 189 41 229 229 301 98.0 6e-81 MTAWLKTELTVTSRRLLARKSNTLLGVIPLGHDDAAMPLGSISEVGVNSKFHPGRAIMAI VWLVLMISMFNAHQPVLGVLALLLLIVAVLTTMDAELRVVNNAGSVTSLTVSALEKAKLQ SFKQEVEQRLYADQALLMHRESMNQAQNFATIQQAQMSALLAQGQLQNQLSNDKGQQPPT QMPNPNTQG >gi|302034468|gb|GL383167.1| GENE 139 131153 - 131365 115 70 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKFRVINEDGIASGGLFCVTDWPPSASATATPHTDRPTEPRRARPANRRGHLPDNSQPWV FGFGIWVGGC >gi|302034468|gb|GL383167.1| GENE 140 131448 - 133202 699 584 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 [Haemophilus influenzae 22.4-21] # 28 495 3 444 456 273 35 4e-72 MPLGIMTSPVSANLEALVPTPLSLDQAIDNIVSPIATAISDAVFWAIPLPGGNEFPLILA WLLGAGLFFTIYLGFQQLRPASIRHSSHVMRGHFSRHTDPGDVTSFQALATELSGTVGLG NIAGVAIAIATGGPGASFWIAVAGLVGMSVKMAEATLGVKFRVINEDGTTSGGPMYYLRD GLASIGKPTLGRVLASLFAICTAFGVIGAGNMFQSNQAAYQLAMFAGGQDSWIGPHMWVV GVVFAILVGIVIVGGASKIGAATSKIVPFMGILYVIMCLAVIGANISQVGSAFEAIWSGA FTGHGVAGGILGVLIVGVQRAAFSNAAGIGTAGIAHSAVKTRRPAQEGFVAMWEPFIDSV VICTMTAITIIITGVYRNSGADGVQMTAQALKTVAPWFSSLLTLAVVLFAFSTMLSYSFY GKKAVGYLFGNSTTAERIYNALFLILLVVGAATNMASILDLADAMLFLMALPNVLGMYFL ARVVAREIKGHRERIDAGVIPQVPEDAQVGMMVVNEATPEQLENADTEYALRAAAQDARS KELQLGHTAPDTERDYLQHLPEDHEIFNTMDREGKPLKDQRHES >gi|302034468|gb|GL383167.1| GENE 141 133569 - 135011 632 480 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4826 NR:ns ## KEGG: HMPREF0675_4826 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 480 30 509 509 767 100.0 0 MGFVGSVMVTLWGWGSPQGGVPTHVRPVGVAVAVSGIAGLIAIIIAWLRSRKLVGRRVLT LVVWSLPLLFSPPLLSQDGWAYAAQGWILTQGMDPYRVPQGLAEVLGKAVDTPWQATTAV YPPGSLWIQAAVVKIAHADPTWSVMLMRVPALIGVALMVWAVPRLARYAGTDPDHALWLA VCCPLTTLSVVGGMHNDGLQVGLSLVALVVAIRLALIGRGWLGLVLGGAFVGLAGSVKQP GVLAGVGIVALVHVNAVRHGGRRWLTRNCWTALLARIAAGAIPALTVFGGISAIHGLGMG WLNSTAGSPVSVTSDSPIALVVQFLRGSGGIPLNRLIGPATGVSLTLTVAAMMWCWVRWG PIPPCHIRLGRIASRSRNAVNVVTGRIGSPLRLQAGVMIVFAAFGASLQPWYLIGPLALL ASVQLRRTHRDAVIGGVVATAILTMMQWYWSPYVCLPLVIVGYLIVWRIPKAWAFVTAAN >gi|302034468|gb|GL383167.1| GENE 142 135109 - 136623 1331 504 aa, chain + ## HITS:1 COG:Cgl0587_3 KEGG:ns NR:ns ## COG: Cgl0587_3 COG0516 # Protein_GI_number: 19551837 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Corynebacterium glutamicum # 211 501 1 291 292 352 64.0 1e-96 MTSDSRPTTIEELAPLALTFDDVLLQPVESNVIPSQVKTTTRVSRNISIAIPLVSAAMDT VTETRMAVAMAREGGLGILHRNLSIEDQAAMVDQVKRSEAGMIDEPITISPNATLADAEE LCHTYRISGVPVVDDKENLVGIITNRDMRFEDNPQRPIREVMTAAPLVTAPVGTSPSDAL SLLAAHKIEKLPLVDADGKLRGLFTLKDFVKTDKYPNATKDPQGRLRVGAAIGFFGNSWD RAMALVEEGVDLIVVDTAHGHTQGVFDMIARLKAEPAARGVDVVAGNIATYEAAKVLCAA GVDGIKVGIGPGSICTTRVVAGVGVPQVTAIFEASKAARQYDVPVIGDGGLQYSGDIAKA LVAGADSVMLGSLLAGCEESPGELAFINGKQFKTYRGMGSMGAMSARGEKLSYSKDRYFQ GDVTTNDKIVPEGIEGQVAYRGPLGAVAYQLVGGLRQSMFYTGARTIDELHERGRFVRIT SAGLRESHPHDIQMTVEAPNYSAH >gi|302034468|gb|GL383167.1| GENE 143 136657 - 137760 1093 367 aa, chain + ## HITS:1 COG:slr1722 KEGG:ns NR:ns ## COG: slr1722 COG0516 # Protein_GI_number: 16330504 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Synechocystis # 4 366 5 366 387 333 49.0 5e-91 MYDIGRSKRATRAYSLDDIALIPSRRTRGTEMVNLEWRIDALTFDFPIMAAPMDSVMSPA TAIEFGRLGGLGVLNLEGLWTRYEDPTPYLEELAGLSDDVATTRRMQEIYAEPIKAELIT ERMAEIRAAGVPVAGSLSPKNASRFSETVVNAGADFFVIRGTTVSAEHVANGDDVLDLRK FIYDLDVPVIVGGCATYQAALHLMRTGAAGVLVGFGGGATHTTRQVLGIQVSMASAIADV AEARRDYMDESGGRYVHVIADGSVGRSGDIAKAIACGADAVMVGSPLARATEAPGRGWHW GAEAWHPDLPRGARVHFEPVGTLAEVLNGPSRVPDGTMNLVGGLRQAMATTGYSEVKEFQ RIELTIR >gi|302034468|gb|GL383167.1| GENE 144 137818 - 138165 348 115 aa, chain + ## HITS:1 COG:AGc4890A KEGG:ns NR:ns ## COG: AGc4890A COG1605 # Protein_GI_number: 15889952 # Func_class: E Amino acid transport and metabolism # Function: Chorismate mutase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 2 103 4 105 105 115 58.0 3e-26 MSEVPDELVVLRGAIDNMDAALIHLLAERFRITREVGRLKAECGLPPADPAREAEQIARL RQLAVESNLDPEFAQKVITFIVAEVVRHHEAIADESGDDSRVADAGEADVPGSGS >gi|302034468|gb|GL383167.1| GENE 145 138174 - 138746 585 190 aa, chain - ## HITS:1 COG:BH0110 KEGG:ns NR:ns ## COG: BH0110 COG1045 # Protein_GI_number: 15612673 # Func_class: E Amino acid transport and metabolism # Function: Serine acetyltransferase # Organism: Bacillus halodurans # 12 183 1 170 229 197 56.0 1e-50 MSTETTALLRTLKRCKERAIEDLDAAMREDPAATSKLMVAIAYQGVHAIWAHRLAHAMWV KKPALRPLARLLSQLSRHITGIEIHPGATIGRRFFIDHGMGVVIGETAVVGDDVLMYHQV TLGGRARGQFKRHPTIGNRVLIGAGAKIIGNITVGDDCKIGANALVVKDVAPGTVVVGIP SKVHQGDVIA >gi|302034468|gb|GL383167.1| GENE 146 138943 - 140496 1283 517 aa, chain + ## HITS:1 COG:Rv3396c_2 KEGG:ns NR:ns ## COG: Rv3396c_2 COG0519 # Protein_GI_number: 15610532 # Func_class: F Nucleotide transport and metabolism # Function: GMP synthase, PP-ATPase domain/subunit # Organism: Mycobacterium tuberculosis H37Rv # 198 517 2 321 321 478 74.0 1e-134 MEQLHDVVLVVDFGAQYAQLIARRVREANVYSEIVPHNMPVRDMLAKEPAAIILSGGPAS VYAEGAPSVDPALFNAGVPVLGICYGFQAMAQALGGQVAHTGASEYGRTSLCITSAGQLL SRIPHTISVWMSHGDSVSRAPEGFSTLARTAGAPVAAFEDVERRLVGVQWHPEVHHTESG QTVLEHFLFDIAGCRPDWNASSIVGDQIAQIRGQVGDRRVICGLSGGVDSAVAAALVQRA VGDQLTCVFVDHGLLRQGEAEQVKNDFVAATGADLVVADESQRFLDALSGVTDPETKRKI IGREFIRTFEDVAKRLNADQPIDFLVQGTLYPDVVESGGGEGAANIKSHHNVGGLPDDLQ FSLVEPLRTLFKDEVRAVGLELGLPEDIVWRQPFPGPGLAIRIIGEVTAERLEVLRTADA ITREEMGAAGLDRKVWQCPVVLLSDVHSVGVQGDGRTYGSPIVLRPVTSEDAMTADWARI PYDVLEKISTRITNACPQINRVVLDITSKPPATIEWE >gi|302034468|gb|GL383167.1| GENE 147 140762 - 141046 328 94 aa, chain - ## HITS:1 COG:TM1156 KEGG:ns NR:ns ## COG: TM1156 COG1983 # Protein_GI_number: 15643913 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Putative stress-responsive transcriptional regulator # Organism: Thermotoga maritima # 1 57 3 59 129 57 43.0 6e-09 MTKLIRPSEGRIIGGVCQGIANSLNLDPTVVRVVAALLILMAGSGPLIYLVLWAIIPDEG SGSSMVTDLADRTRSPHKPEGTQGSSAPFDPYKD >gi|302034468|gb|GL383167.1| GENE 148 141279 - 141542 406 87 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4818 NR:ns ## KEGG: HMPREF0675_4818 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 87 1 87 87 111 100.0 8e-24 MGFIGWIVLGLIAGAIAKAIMPGKQGGGFLVTLLLGVIGAVLGGWLGSAIFHKPLGKFWS PWTWLISIVGALIVLWIWGIITKKKAQ >gi|302034468|gb|GL383167.1| GENE 149 141689 - 142951 864 420 aa, chain - ## HITS:1 COG:lin2646 KEGG:ns NR:ns ## COG: lin2646 COG1502 # Protein_GI_number: 16801708 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes # Organism: Listeria innocua # 62 415 119 480 482 202 33.0 1e-51 MTWAPRQRFTVRRALHWVAGGIVAAQMATMVGLVTFNGIKRRGRRPYRFPTAPTEPLKVS GHQVEIFAFGRDLYAAMIADIESAQHTVYLETFIWKNDEVGRHFRQALVEAAARGVKVYA MWDTFANLVVDPRFFRQLEGVQVRAQPLVTPSWIPTLRNLGRDHRKLLIVDSKVAYIGGY NIGSLYADRWRDTHARITGPAVGELESVFVDMWNQRPKGALIPRRNQPVLPTPGVRYWDT AFAVHRNSPRMAVYPIRNMYLEAIDRASERIWMTQGYLIPDDDVVAALHQAASRGVDVRI VIPAESNHVIADWLSRGYYDRLLHQGVRLFLYQGAMVHAKTCTIDGIWSTIGTANLDRLS LQGNYEVNVAITDSTVAQRMAEIFEIDMANCVELTLDEWQSRSHIAKLTEALLSPWRPFF >gi|302034468|gb|GL383167.1| GENE 150 143048 - 143701 793 217 aa, chain - ## HITS:1 COG:Cgl0617 KEGG:ns NR:ns ## COG: Cgl0617 COG2011 # Protein_GI_number: 19551867 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, permease component # Organism: Corynebacterium glutamicum # 5 217 13 225 225 179 58.0 5e-45 MNDYLRPIYLQSIWETLFMALITLVIGGICGLVLGILLYATRRGGLLANKIVHTILNVIV NIIRPIPFIIFMTAIAPLTLKVIGTTIGVRAATFPLCIAATFAISRIVEQNLVTVDPGVI EAARAMGAGPWRILFDVVAREALGPLILGYTYILIAIVDMTAIAGALGGGGLGQFAITYG YQRYNWAVTAVAVVTIIIVVQLAQFLGNWLARRALRR >gi|302034468|gb|GL383167.1| GENE 151 143701 - 144798 864 365 aa, chain - ## HITS:1 COG:Cgl0618 KEGG:ns NR:ns ## COG: Cgl0618 COG1135 # Protein_GI_number: 19551868 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, ATPase component # Organism: Corynebacterium glutamicum # 17 342 25 349 360 305 51.0 1e-82 MATDITPSSAPQCPDHIVFEHVTKEFRTRSGTVRALDDVSLAIKRGSISAVIGHSGAGKS TLVRLINGLETPTRGRVLVDGTDVSQLSDKAMRPLRADIGMIFQQFNLFGSRTIYDNVAY PLKLAHWKKADEKKRVTELLSFVGLTSKAWDHPDQLSGGQKQRVGIARALATKPSILLAD ESTSALDPETTADVLSLLKRVNAELGVTVVVITHEMEVVRSIAQQVSVLAAGHLVESGSA RQVFTHPQSETTQRFLATIIGQHPSGEEQARLQSENPDARLVDVSSVASHSFGDALARIS RTGASFQIVHGGVIEVHDGSLGNYTVALSGPAQAVEQAARILDEVSNSAAPTASATVPTP TEEAH >gi|302034468|gb|GL383167.1| GENE 152 144830 - 145792 1132 320 aa, chain - ## HITS:1 COG:Cgl0619 KEGG:ns NR:ns ## COG: Cgl0619 COG1464 # Protein_GI_number: 19551869 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Corynebacterium glutamicum # 41 314 14 295 299 186 38.0 5e-47 MSTPISSASTPEALPEKPGGRHTGLIIAAIIIVLAIIASIIFAVTKNTGQDSAADGKTTV KIGTTEAANDYWNVIKKKAAAESINIEVVSFNDYTQPNVALSQGQIDLNAFQHLLFLADY DVKNNDNITALAATYIVPLNIYSKKYQRLSQLPAGATIAIPNDATNQGRALLVLQEAGLL KLRGNGSALSTPADVITNQSKVKVKAIDAAQTAASLEGVDGAVVNNNFATDAGLDRNKVL YQDDAAGKSADPYLNIIAVKDADKDNPTYKKVAKLWSDPDVKNAIVKQSGGTAKIVSNHS KADLDKILSGLTTDIKKSNS >gi|302034468|gb|GL383167.1| GENE 153 146239 - 148671 1422 810 aa, chain + ## HITS:1 COG:MT0976 KEGG:ns NR:ns ## COG: MT0976 COG0210 # Protein_GI_number: 15840373 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Mycobacterium tuberculosis CDC1551 # 37 810 14 771 771 763 55.0 0 MTTPDLFSFFESAHERRSSVEPGVLPTYAPVTAGAASPADLLVDLNEPQREAVLHAGSPV LVVAGAGSGKTRVLTRRIAHLVGDRGVHPGSILAITFTNKAAAEMKARVVDLVGNRAKPM WVSTFHSAAVRILRTDIDRLGISRNFSIYDDTDAKRLITLVTRDQNLDPKKFQPRAIMNW ISHQKNELIAPDQAVAAAKSGNDRINGDVYVEYQRRLRAANALDFDDLIMCTVTVLRQFP EVREQYRRRFRHVLVDEYQDTNTAQYQFIRELCGDDPVELDDGARSVDPPELMVVGDSDQ SIYAFRGATIRNIIDFEKDFPGARTILLEQNYRSTQTILTAANNLIKVNLNRPAKNLWTD QGDGDKIVGYVADTEHDEAAWVARRIDELVDEGRTSYGQVAVFYRTNAQSRAFEDVFIRT GLPYRVVGGVRFYERKEVRDAVSYLRAIANPSDDVSLRRILNTPRRGIGARAEAAVEMFA TARRISFWEALKRIDEIDGLATRSVNQIRAFVSLMDDHIAMVGQGKRADEIANSILKESG YITELENSKDPQDETRLENLVELVSVAQEFVARVHAVDIDEAEQGNVEDLELSGDDSLPA FLEQIALVADSDQVPADSDGVVTLMTLHTAKGLEFDTVFITGFEDGVFPHMRSLADATEL SEERRLAYVGITRARKQLFVSRASVRTMWGQAQYTPPSRFIDEIPEHLIEWERIGQASVG WSTSASGRSQSARGALRDDTPAFGSGRGSASALKGRTLALSVGDKVLHSTFGLGTVKATS GQGDNAKADVDFGSAGLKRLALRFAPLEKL >gi|302034468|gb|GL383167.1| GENE 154 148898 - 150073 1238 391 aa, chain + ## HITS:1 COG:Cgl2512 KEGG:ns NR:ns ## COG: Cgl2512 COG0045 # Protein_GI_number: 19553762 # Func_class: C Energy production and conversion # Function: Succinyl-CoA synthetase, beta subunit # Organism: Corynebacterium glutamicum # 1 376 5 379 402 459 67.0 1e-129 MDLYEYQARDLFEKHGVPVLRGIVAETPEQASEAAAKLGTPVVAVKAQVKVGGRGKAGGV KIAKSPAEAAERAEAILGMDIKGHTVHKVMVAEGADIAEEYYFSILLDRGERRYLAMCSR EGGMDIETLAKERPEALAKVPVDPIDGVDDAKAREILSEAGFPDSEQDAIVPAVLKLWET YRDEDATLVEVNPMIKTGDGRILAIDGKMTVDNNASFRQPDHAGLVDRATTDPLELRAGE LGLNYVKLDGNVGVIGNGAGLVMSTLDCVAYAGENFPGSPAPANFLDIGGGASAEIMANG LDLIMSDEQVRSVFVNVFGGITACDQVALGIKGALEKLGDKAVKPLVVRLDGNAVAEGRK ILEEFNHPLVTMVSTMDEAASKAAELASKEA >gi|302034468|gb|GL383167.1| GENE 155 150077 - 150970 1114 297 aa, chain + ## HITS:1 COG:MT0979 KEGG:ns NR:ns ## COG: MT0979 COG0074 # Protein_GI_number: 15840376 # Func_class: C Energy production and conversion # Function: Succinyl-CoA synthetase, alpha subunit # Organism: Mycobacterium tuberculosis CDC1551 # 1 295 4 303 303 358 69.0 8e-99 MAIILDQNSKIIVQGMTGSEGMKHTQRMLDSGTAVVGGVNPRKAGTTVDFNGGTTVPVYG SVKQAVEATGANVSVIFVPAKFTKSAVMEAIEAEMPLVVCITEGVPVKDTAEFFTAAQRS GKTRIIGPNCPGIISPGKSNAGIVPADITGPGRVGLVSKSGTLTYQLMYEVRDLGISTAI GIGGDPIIGTTHIDALQAFQDDPETDIIVMIGEIGGDAEERAAKYISEHITKPVVAYVAG FTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAVGVRVGKTPTETARLAHEAMESLKK >gi|302034468|gb|GL383167.1| GENE 156 151120 - 152613 682 497 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4808 NR:ns ## KEGG: HMPREF0675_4808 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 497 1 497 497 798 100.0 0 MVRSGSTSTSARFVIESSKADESREPRVPWPWPVVVVVAAAAAILVQWLAFAGIIVPEWL ASNGRSFPSILAAASSLWLSGHGVPVDIIGVHIGLIPLGLTCVSLLLGEEACRYGARVLW HRHDKRPARRHVGEAVALHTTIELLAAVVMAAGATTPHWLAAMVGALLIGLCSGIVGACR GAHINPLSRLPHWARGLPKAVGATVAVCLAGGAAALAVALLVHADRVIHLHQQIGATGWG GFCLILLQLAWLPTMALWGTAWTMSPGFAFGTGTFVSPLGSHLGIVPALPVLGALPPNGP LNPAACVWLAVPVVAAIVGGILVMRSLPEAEFEIGCGLGALSGLLSGLVLGALGSLSSGN LGDGRLSEVGTIMPATGGCAVGVLTLVTMLCGFVIGLSRRLRSEESRQGRAERRQERKKN HAVKAEKKARNRAAKKKAKAEQKAAADKREAEAKQDKVAPENATAEPVDDEAIGHDIYDS IQHNQDAPDDGDTTDRP >gi|302034468|gb|GL383167.1| GENE 157 152899 - 153894 470 331 aa, chain + ## HITS:1 COG:MT1453_2 KEGG:ns NR:ns ## COG: MT1453_2 COG1985 # Protein_GI_number: 15840867 # Func_class: H Coenzyme transport and metabolism # Function: Pyrimidine reductase, riboflavin biosynthesis # Organism: Mycobacterium tuberculosis CDC1551 # 137 324 8 196 203 150 47.0 3e-36 MDQRWDDAMALALDMAAKSPCPDPNPRVGCVIVAEDRVIGQGWHRGAGTPHAEVEALRQA GDDARGATAVVTLEPCHHTGRTGPCSHALVDAGIARVVIAQSDPNPVASGGEQWLRTHGV EVVTGVLSEEATALNADWTFSQIHRRPRVCWKYAASLDGRSAAPDGTSQWITGEQARHQV QLGRARCGAIIVGTGTALADNPRLTVRLPGVTHQPLRVVVGMREPPAGCHLRDDSASTLH IPSHDPAEVLDLLWCRGVHRVWLEGGPQLAGAFLAANLVDEVIAHMAPTVLGGGRAAVVD PTVATLSQAHHFVIDDVTQLGPDIQIHAHHE >gi|302034468|gb|GL383167.1| GENE 158 153887 - 154501 427 204 aa, chain + ## HITS:1 COG:MT1456 KEGG:ns NR:ns ## COG: MT1456 COG0307 # Protein_GI_number: 15840870 # Func_class: H Coenzyme transport and metabolism # Function: Riboflavin synthase alpha chain # Organism: Mycobacterium tuberculosis CDC1551 # 6 197 1 196 201 214 60.0 6e-56 MSEDTMFTGIIEEIGEVLAIEKGRDSARLAIRGPLVCSDARLGSSIAVNGTCLTVTDLDE ASFGCDVMAETLNRTALGGLAPGSRVNLERPVPVGDRLGGHIVQGHVDGLAKLVFRTPGD HWEVFRFALPAAVSRYVVEKGSIAINGTSLTVCAVAPEWFEVSLIPATLTGTVLGALSPG DEVNVEVDIIAKYLEALTNKERSC >gi|302034468|gb|GL383167.1| GENE 159 154495 - 155811 935 438 aa, chain + ## HITS:1 COG:Rv1415_1 KEGG:ns NR:ns ## COG: Rv1415_1 COG0108 # Protein_GI_number: 15608553 # Func_class: H Coenzyme transport and metabolism # Function: 3,4-dihydroxy-2-butanone 4-phosphate synthase # Organism: Mycobacterium tuberculosis H37Rv # 2 201 4 205 205 195 53.0 2e-49 MLNTIEEVLAELRAGRPVLVTDDADRENEGDAILAAELADPRWVGWMVRHTSGYLCAPMT EERADQLDLPLMWPASQDPLRTRYTVAVDAAHGITTGIDAVQRARTARVLADPSSTPSDL VRPGHVLPLRARAGGVLERRGHTEAAVDLARLAGLEPVGLIGELVGDDGMCLRADAIADL ARTEGLALTTIDQLAQWRQAHDPGPAVPTQRVTALASAHLPTRHGQFAITGYRDNCTGVE HVLLVGEKGIDADDGGPAWVRVHSECLTGDALGSLRCDCGDQLAAAQQHVCRHGGAIILL RDHEGRATGLLNKIAAYKAQDGGLDTVGAQTHLGLPVDAREYGAAVAILANIGITSVRLL TNNPAKAEALRDGGLEVTMSPLETSTRPEDERYLRTKRDRMGHALTLGVSPSEMSTQPLA SSHTTSTTPALTIKGDRP >gi|302034468|gb|GL383167.1| GENE 160 155808 - 156308 386 166 aa, chain + ## HITS:1 COG:Rv1416 KEGG:ns NR:ns ## COG: Rv1416 COG0054 # Protein_GI_number: 15608554 # Func_class: H Coenzyme transport and metabolism # Function: Riboflavin synthase beta-chain # Organism: Mycobacterium tuberculosis H37Rv # 12 143 2 133 154 140 56.0 2e-33 MSSRTTLGLSAPDLSGLDGSGLKVAVVAAQWHGTVMTGLLDGALRGLVDSGVHDPAVIRV PGSFELPVACASLADHFDALVALGVIIRGGTPHFDYVCDAATRGITDVAVRTKTPIGFGI LTCDDEAQALDRAGLEGSHEDKGYEAAQAAIATLTALSTALASGPS >gi|302034468|gb|GL383167.1| GENE 161 156333 - 156956 536 207 aa, chain + ## HITS:1 COG:Cgl0837 KEGG:ns NR:ns ## COG: Cgl0837 COG0299 # Protein_GI_number: 19552087 # Func_class: F Nucleotide transport and metabolism # Function: Folate-dependent phosphoribosylglycinamide formyltransferase PurN # Organism: Corynebacterium glutamicum # 5 197 9 193 197 181 56.0 1e-45 MAFRVVVLVSGTGTLLQSLIDNLPEQVSIVAVGSDQPDAVALQRAQAVGIPTFAEPLPRS DAQTTMRAAWDTRLTDAVARFDPDLVVCAGFMKLLGQTFLDRFGGRTINSHPALLPSFPG IHGPRDALEYGVKITGATVFMVDAGVDTGRILAQRAVPVLTDDTVESLHERIKVKEREML VTVVTELAGVRPGMEELGTESSRKDPQ >gi|302034468|gb|GL383167.1| GENE 162 156953 - 158503 1369 516 aa, chain + ## HITS:1 COG:Cgl0838 KEGG:ns NR:ns ## COG: Cgl0838 COG0138 # Protein_GI_number: 19552088 # Func_class: F Nucleotide transport and metabolism # Function: AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) # Organism: Corynebacterium glutamicum # 3 516 4 520 520 635 65.0 0 MSERQPIRRALVSVYDKSGLDQLAKALIDAQVEVVSTGSTAKELASHGVTVTEVSEITGF PECLDGRVKTLHPKVHAGILADRRLTSHREQLTALEVKPFDLVVCNLYPFAETVAQGGDF DECIEKIDIGGPSMVRAAAKNHANVAVLTNPDQYEDLARALSEGGYTMEERRVLAARAFA HTAAYDVAVATWFGSRDGVAVDGVPTFVGTTGELSHPLRYGENSHQAAAVYRSSGEPGLA GARQLHGKAMSYNNYVDTNSARRAAFDFEAPCVAVIKHSNPCGIATGSDIAEAHRKAHAC DSLSAFGGVIATNRPVSVEMAEQVAEIFTEVVVAPGYEDGAVEILSRKKNIRLLECPAPH LAGWELRQIDGGLLAMETDLFQADGDDPANWTLAAGDPVDDVTLADLSFAWRACRSVRSN AILLAHDGASVGVGMGQVNRVDSCRLAVERAGDRAAGSVAASDAFFPFADGPQVLIDAHI AAIVEPGGSIRDDQTIEVCRTAGVPLYFTGTRHFFH >gi|302034468|gb|GL383167.1| GENE 163 158582 - 159208 331 208 aa, chain - ## HITS:1 COG:no KEGG:PPA1746 NR:ns ## KEGG: PPA1746 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 18 208 18 208 208 344 100.0 1e-93 MSRRTTPRRGRRTSIRRVSCQVAVLGLCTATGLLAGCSFSDHTTPAPSDSRPPAQQLASQ PLPSWIPSPTTGRKATGSVQRPALSYQGVEVRVDLDRGNSVTMNVHGPTAPAGTKVGAEA ADLTWTVTVSDATGTIPLSITQFNVQDEAGKYHWAQPVKGSPVPAKISKGQKVTFTIHTV ASAGEGMVRWAPDGKHVVALWDYIAELD >gi|302034468|gb|GL383167.1| GENE 164 159220 - 161646 1915 808 aa, chain - ## HITS:1 COG:no KEGG:PPA1745 NR:ns ## KEGG: PPA1745 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 808 44 851 851 1462 99.0 0 MHIHRRFTKAVGAAVAAGLLAFGLSTPAPGLALPAEGVPVKAGNAPAHTTITTTNPATGK IKHVWLIILENKSYDENFTGLNQNSYLWKELPRQGALLNHYYGTGHYSQDNYITLVSGQA PQMDLQEDCGDVNSNFGSNSSIIRTHTGKEFGRNDNYGQAMSLAGPNAPAGKNGCTYPKD IPTLFNQFDAAGVTWKGYAQDLRNHPGREDGLAGSPGTLANTPDKNPKVMKTNAQDEARG ITSYTGAQADDQYVAKHFPFVWFHSIIGNDGTGKDALTHPIDGGTPSDTKHIVNLDDHSR GLVSDLSRPADQVPAFNWITPNNCSDAHDATCKGNNLSGLFDAHGSPDYSKPLTTPPKNH TGGLYAADLWLRYYIPLIEKSAAFKDGGLIDVTFDEANPPFANLSFNNATDNTDVAKAAR RHELYNYSPQTVKDLAPGYQKYAPGTFPGATTTARNYLKADLAGQNINGRNVDWEPTGPN STLATDKHGNQLFPGPGGNGFITRPPSCEQDTKLVNADKSNCVHGAKNTGASWGYSQAST LKASATAGSSTVQADVTFADIGRRVTGNGIPEGAHVGNVTNLGPNMVASASDPVTKGMFT LVDKNDNPLTTTGVVSSVKLSATGVPGHLAEGETPASTFDAHDATPGGGITGSILISPYI KPGTVSSTHYNHFSWLRTMEDIFSVSKGKDTRQLEAGTVSGGLDGAGHLGFAAQAGLGTF GKDVFTNVSTGDEPHPSASTTAGAPSSHPSLAPSRGPATHPSRSGKPSLPRTGAEGTVDP VSDSHASMETGLAVIGAALDTRTWHRHH >gi|302034468|gb|GL383167.1| GENE 165 161645 - 161824 57 59 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313830195|gb|EFS67909.1| ## NR: gi|313830195|gb|EFS67909.1| hypothetical protein HMPREF9616_02360 [Propionibacterium acnes HL007PA1] hypothetical protein HMPREF9592_00254 [Propionibacterium acnes HL046PA1] # 1 59 3 61 61 107 100.0 3e-22 MTTGLYPAKRDLWGFGEMVLTGTDVEAPVEVSTVLVRWRRVACMTPVYRWQSEAGRVAG >gi|302034468|gb|GL383167.1| GENE 166 161846 - 162841 353 331 aa, chain + ## HITS:1 COG:no KEGG:PPA1744 NR:ns ## KEGG: PPA1744 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 11 331 1 321 321 608 100.0 1e-172 MCGDGVTVTTMTALGRQALAVTARWLRDGLCSGKRGRSNSLVVPWFSCQTMITPWQLEGY RVHRLPVGHNFQLDADALANALAACRRQGEHPAVLTCETFGIQPSSKLIEVLKQARRDGV PVIVDRTHSFLAPSRTPADIEVVSTRKLLPLTEVAWVQADEDLSELVGTRDNKDVFLTSA RRRFLKDRGLDTFEEAENLADDCWVPVPPDDDARAEFEGFNLAEFSRRVDQTRAALLSGL EVAQIVNPSARCAMVLSHPAADELADRLRNVGVVGPLHWDRPQHLDVDWPDDLVSLPPVM NETTIDRVIDVATMVVEGARFSWKDRDLLRP >gi|302034468|gb|GL383167.1| GENE 167 162856 - 163719 625 287 aa, chain + ## HITS:1 COG:Cgl0629 KEGG:ns NR:ns ## COG: Cgl0629 COG0190 # Protein_GI_number: 19551879 # Func_class: H Coenzyme transport and metabolism # Function: 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase # Organism: Corynebacterium glutamicum # 1 284 1 283 284 357 64.0 1e-98 MTAQKLDGKATAAAIKSELAERVAALRDQGVVPGLGTVLVGEDPASHQYVAGKHRDCAQV GIESIRVDLPADVTEEELAQKIRGLNANPHCTGYIVQLPLPRHIDTNWALNLIDPNKDAD GLTPASLGRLVLNEPAPLPCTPRGIVELLTRHGIELPGANVCVVGRGTTVGRPLGLLLTR RSENCTVTLCHTGTRNLAEHTRQADIIIGAAGSPGLINADMIREGAVLVDVGVSRTPEGK IQGDFTADVWEKAAWVSPNPGGVGPMTRAMLLSNVVDRAERLTADPS >gi|302034468|gb|GL383167.1| GENE 168 163716 - 164054 131 112 aa, chain + ## HITS:1 COG:no KEGG:PPA1742 NR:ns ## KEGG: PPA1742 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 112 1 112 112 177 100.0 1e-43 MRQPRHAAEAPVSTATRHARRSERCAESKEHLQSWWALTVCLLGVAASAIVMGTGHWRRG AMVFAASVLMAGILRVVLPEQSAGLLAVRTRWIDSVLLLGLGAVMVVVILTR >gi|302034468|gb|GL383167.1| GENE 169 164129 - 165472 838 447 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148544941|ref|YP_001272311.1| 50S ribosomal protein L29P [Lactobacillus reuteri DSM 20016] # 15 441 38 464 477 327 42 3e-88 MTTTAVPPTSTQLCGVFADVNAAVAAAREAFLAFSDCSLAQRRTFINAVREAASQQERLE YMATAAVEETGMGNAHHKVLKNLYAATRTPGVEDLVMEARQGDDGLTTLEYSPYGVIGAI TPTTNPTETIICNTVGMLAAGNTVVFSPHPRARHLSAWLVDVLNRAMVEAGAPDNLITVI TEPTPDTTKALINHPDITMLVATGGPQIVNMVLSSGKKAIGAGSGNPPAVVDETADVAKA ASDIVQGASFDNNLPCTAEKEVIVVAEVLPQLMTAMTANGAQVVSDPEELAKLRSLLLDT SGTRPNTAWVGQDAQKILRTAGIEPHQDTRLVTMVTDPSDPFVQVEMLMPVVPVVPVTDY LTAIDLAVELEHGNRHTAIMHSKDVSRLDLMARRIQTTIFVKNGPSFAGIGINGEGFATF TIAGPTGEGLTSARSFARRRRCVLDAH >gi|302034468|gb|GL383167.1| GENE 170 165900 - 166883 1092 327 aa, chain - ## HITS:1 COG:ML1091 KEGG:ns NR:ns ## COG: ML1091 COG0039 # Protein_GI_number: 15827536 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Mycobacterium leprae # 1 327 1 329 329 447 75.0 1e-125 MTQTPVKIAVTGAAGQICYSLLFRIASGSLLGDTPIELRLLEITPALKALEGVVMELDDC AFGNLVNIEIGDDPKKVFDGVNAAFLVGAMPRKAGMERSDLLTKNGAIFTAQGKALNDVA ADDVRVLVTGNPANTNALIAATNAVDIPNNHFAALTRLDHNRAKTQLARKTGKTVNDVRH MTIWGNHSSTQYPDVFHAEVAGQKATNLVNEAWIENEFIPTVAKRGAAIIDARGASSAAS AANATVECMRDWMGSTPEGDWVSMAIPSDGSYGVPEGLISSFPVTITNGKVEIVQGLDID DFSRAKIDASAKELADERDAVKELGLI >gi|302034468|gb|GL383167.1| GENE 171 167062 - 167913 539 283 aa, chain - ## HITS:1 COG:RSc1873 KEGG:ns NR:ns ## COG: RSc1873 COG0788 # Protein_GI_number: 17546592 # Func_class: F Nucleotide transport and metabolism # Function: Formyltetrahydrofolate hydrolase # Organism: Ralstonia solanacearum # 7 283 6 288 288 246 46.0 4e-65 MSESHELVVTWTSPDRPGLVHAVTGACAQVGGNLTECQQFTSTDTGNFFIRLQVESASSR ADLESAVSELAGKCNATVHVDELGRPVRTLILASKASHCLSHLLFNRDAGRLPIDVVQVM ANHPDLADLTAFHKVPFRWQKVDRESKTSFEQEVLRTVGDLDVELVVLARYMQILSPELC EQLSGRCINIHHSFLPGFKGANPYRQAHSRGVKLIGATAHFVTVDLDEGPIIEQRVQRVN HSQTVAQLTAVGQDTESATLNEAVRLFAEHRTFLDGMRTVILQ >gi|302034468|gb|GL383167.1| GENE 172 168109 - 170313 1910 734 aa, chain + ## HITS:1 COG:XF2700 KEGG:ns NR:ns ## COG: XF2700 COG2838 # Protein_GI_number: 15839289 # Func_class: C Energy production and conversion # Function: Monomeric isocitrate dehydrogenase # Organism: Xylella fastidiosa 9a5c # 2 728 22 752 760 849 58.0 0 MPTIVWTKIDEAPALASYSLLPIVEGFLDGSGIDITTSDISLAGRILAQFPDRLNEDQKV ADHLAELGELTGSPDANIIKLPNISASVPQLKAAIAELQSQGYELPDFPDKPSTDEEREI AARYATVLGSAVNPVLRQGNSDRRAPTAVKAYAKAHPHRMGQWTDQVKARVAHMDHGDFF DHEESFVSRGQDLDVVLIGTDGSETTLASGIKTLDGEIVDATFMSVDALDEFYASSLAQA NEEDLLWSVHLKATMMKVSDPVLFGHAVRTFLVDVFDKYGDDLNSVGVNPDLGLGDLYTR LEKLPAERATAIKAAIDSAFAARPALAMVDSDNGITNLHAGNLVIIDASMPTVVRDSGCM WNAEGKRQETLACIPDRSYATMYAAIMDDCREHGALDPATMGDVPNVGLMAQKAEEYGSH PTTFIVPHDGRVEVRCGDEVLTNQQVEAGDVWRMSRVRDIPVRDWVRLAIERARITNTPA VFWLDKNRAHDARVIEKVKAYLPEHEGLDIRILAPADAMKFTLARIRRGEDTISVTGNVL RDYLTDVFPILEIGTSAKMLSVVPLLAGGGLFETGAGGSAPKHVAQFVAEDYLRWDSLGE FCALGACLEHIDQTSEGTKAGILAATLDKAIGAFLENDRSPARKLGQSDNRGSHYWLARY WASELAAQHDDAELADRFSDVATELAAREDQILKELNGVQGSPVDMGGYYHPDEELVAEA MRPSTTFNAIIESL >gi|302034468|gb|GL383167.1| GENE 173 170523 - 171458 462 311 aa, chain + ## HITS:1 COG:no KEGG:PPA1737 NR:ns ## KEGG: PPA1737 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 311 72 382 382 548 100.0 1e-154 MFGHTDPWISDLAFLPGLPALGRVIILVTGMSPYLAILIAAQMGFLTAAAVITAVGHRVA GPTAAVLLVACWGAAPRAVVESMGYTEGWFIALVGLGLLAILSGRWILAGVFVGVAGLFR ASVAPVCIVLGIAWLTSLCTKAEAGQRWRRFVGMALSPLGLLTWFVIVAHRTGRWNGYLL VQKAWGSEMGTLLDTWEDLHSRMDHVPFDWRYTGLVALTWCMYLALGIVMAVRREQVWLT GYVLVTVIFVGHMQGYFNSKARFLLPAFPAFLPVARLLDRSPRWFQAVFVLVISAVSTWW SLDILGHNLSP >gi|302034468|gb|GL383167.1| GENE 174 171586 - 172992 996 468 aa, chain + ## HITS:1 COG:sll0260 KEGG:ns NR:ns ## COG: sll0260 COG1253 # Protein_GI_number: 16331101 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Synechocystis # 10 396 12 405 448 224 34.0 3e-58 MAEVFENAALILLFILVGGVFSAAEMALVSLRDSQIKQLAATRGSRGRSIQKLQSNPNRF LSAVQIGVTLSGFLASAFGGATLASELAPVFESWGMSASVAATVALVTITVIISYFSIVL GELVAKRLAMQRAEGFSVALGPMVNGIATLFRPIIWFLGVSTDLVVKILGGDPTAAREEV TDEEIRSMVVSSATLGDEERTILDEVFAVGEKSLREVMVPRTEVDFLQGSMKAVQAAQVV RDGSHSRYPVIDGSADRVLGFVHVRDLLELNPQIRTSRVSQLVRAVVSLPDTVKALKALT EMRRTNAHLAIVLDEYGGTAGIVTLEDLVEEIVGDITDEYDTVEPSDLAHVRQRDIDGLT TLEEFSDKVGLVLPEGPYDTLAGYFMAQTGEVPTKGAQVDVHLDPVGYVPDENDEDVEPD PNIELTVTEVDGLRAAWLRIRRLDAPGASTVPAGTSTIPRPEREAASA >gi|302034468|gb|GL383167.1| GENE 175 172989 - 174230 583 413 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4789 NR:ns ## KEGG: HMPREF0675_4789 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 413 1 413 413 810 100.0 0 MRRRPAWLGGPGKDADGAVLLTGPEAGELLKAAVGHAGGGLVDWHLDHVDANPGQSTTAT YQARVQWPAGEREELFGMSARASGPAVTDSRADIYVDGSREVAVWRYPDDPDLPGLSRAA YPEQMAAIISDLNLVGARVSAQQINLHMIGYRPRRRAVLCAEVNNRRFYVKVLRDGIFQA TLARHDLLTRASVPSPRVAGVTEDNLLFLTELPGCPLSKALFEPGSPCTAESLVSLLDQL PPQVCDLPRRSPWSESVAHYCRMVAAALPDQSERLERMAQIITEGLSDVPAGNEPTHGDF HEGQIHVWNGHVCGILDVDTVGPGRRADDLACLVAHLSTVQRMNVPQADRMRQILTAWVP VFDSRVDPIELRLRSAAVAISLATGPYRSQEDNWQAETLSIVDAAEALVNQVA >gi|302034468|gb|GL383167.1| GENE 176 174366 - 175556 1192 396 aa, chain + ## HITS:1 COG:CAC0702 KEGG:ns NR:ns ## COG: CAC0702 COG1744 # Protein_GI_number: 15893990 # Func_class: R General function prediction only # Function: Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein # Organism: Clostridium acetobutylicum # 71 389 35 341 357 142 31.0 9e-34 MARSATHAPRVFHRWIIVCSRRQSVKKLHLAIPAVFAAAALSLSACAQAPDASTGSSAGS STSAAGKDNSNSGEFKACMVSDSAGFNDKSFNETSLQGLNKAASDLGVKTAKVESKDDKD YATNLQSMVDAKCSIIVSVGFLLEKPTLAAAKANPNVKFAIVDDNPANPPENLKPLIFNT AQSSFEAGYLASALTKTGKVATFGGMKIPTVTIFMDGFSQGVDYYNKQKHKSVQAIGWDV KKQDGQFVPQPNPFQNVSGGKATAQALLNQGADIILPVAGNAGNGALQAVKSSGGKANAI WVDGDGCKTQPAYCSNIITSVFKGMDVAVFDAVKAAKDGKFDNKPYVGSLEDGGTGLSPF HEFDSKIPADVKNELKAIKDDINSGKITITSKAQPK >gi|302034468|gb|GL383167.1| GENE 177 175580 - 175804 64 74 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4786 NR:ns ## KEGG: HMPREF0675_4786 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 36 74 1 39 39 67 97.0 2e-10 MWSLAVRVPNLFVTPRRLSPSLRGALSPGGATVVLVVTGQILPRLVPDVACADDAPTSTG SRRVVVSRGWPHSG >gi|302034468|gb|GL383167.1| GENE 178 175692 - 177281 1396 529 aa, chain + ## HITS:1 COG:L165279 KEGG:ns NR:ns ## COG: L165279 COG3845 # Protein_GI_number: 15673310 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport systems, ATPase components # Organism: Lactococcus lactis # 25 515 12 506 506 477 52.0 1e-134 MTTNTTVAPPGDNAPLKDGLSLRGVTKRFGTLTANDHIDLDIVPGRIHCLLGENGAGKST LMNILYGLLPSDEGQVYIDGVEQHFDNSKQAMAAGIGMVHQHFMLVNVFTVAENIALGRE ESTAGILSMRRARAKVRELSDRYHFDVNPDSVIENLPVGVQQRVEILKSLANDAQYLIFD EPTAVLTPQEIDELMAVMKTLRDEGRAIVFITHKLREVRAIADDITVVRRGRIVGKASAD QSEAELAEMMVGRAVKLVVDKDEAKPTGSRLDIKDLTVADDRGSVVVDGVSLSVAGGEIL GVAGVQGNGQTELASSLLGLIKPTSGTIRIDGKDTTGAAPAKVIEAGLGFVPEDRQRDGF VGEFSIAENLVLNQVGAYSKHGNLQLRRIADNARDRVEEFDIRTPSASLPVSSLSGGNQQ KVVLARELSRSLSVLVASQPTRGVDVGAIEFLHKRVVEERDNGTAVLIVSTELDEIEALS DRIAVMYRGRIVGIAPAGTPRDVLGLMMAGFSYDEACDSVAKGHKEVSE >gi|302034468|gb|GL383167.1| GENE 179 177278 - 178549 1395 423 aa, chain + ## HITS:1 COG:lin1427 KEGG:ns NR:ns ## COG: lin1427 COG4603 # Protein_GI_number: 16800495 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Listeria innocua # 86 390 35 337 350 178 39.0 2e-44 MSTESLKPAASKEATSPTAATASQTEATSHRSFPWNDLWVTVAAFVLAFIVSAIVMVAAD PAINKEWSYLFSRPDALSDSWAQISSAYAALFQGAFGSWQALTATTAQSAPLICGGLAIG LGFKAGLFNIGGQGQAIAGATLAAWVGFNFHSLPLPVHLLFAVIAGFIGGAIWGGIAGIL KARAGANEVIVTIMLNYIAGGLLAWLLTTKAFQMPGRTDPIAPIVDWNATFPRMAGSQLH LGFFLALLLAVGTWWLLDRTPLGFQIRAVGSNPNASATAGMNTNSIIAWTMIISGGLAGM AGVEVALGPISGATPTQLSIGLVGTIGFDAITVALLGRSKPLGIVLAGLFWGAMNQGGLR MQAMTQTSLDLVRVIQAVIVMFVAAPMLVKTILPFLKTRREKRTKKRDRGPVPADTTTKG ALA >gi|302034468|gb|GL383167.1| GENE 180 178546 - 179904 1134 452 aa, chain + ## HITS:1 COG:alr5368 KEGG:ns NR:ns ## COG: alr5368 COG1079 # Protein_GI_number: 17232860 # Func_class: R General function prediction only # Function: Uncharacterized ABC-type transport system, permease component # Organism: Nostoc sp. PCC 7120 # 154 452 11 307 312 199 38.0 1e-50 MSPTSRFPRPTTSDITKIGIELPAEASEALDRELEFEQVESREARTHRLSTGVLIGIMAL VLFILVTKTSGEAHFAFTDALAGKELGTMSVSGFPVVLVSAIACLLAAGAFFMGRSRHTL TVTAGVVAGIAIIVGFLSWAAAGRGLPFQVAGQLQGTLSVATPLVLGALCGVMCERAGVV NVAIEGEMLTAAFAAALVGSITKSIFAAIVVGIVASVLTAALLAVFTIKYFVDQVVMGVV VNLFASGLTGFFYTQLLSPNAEEYNTAPIMEAVAIPGLSKIPFFGPIFFDQTVLVYIGFL CIPLVWFLLWRTKWGLRVRSVGEHPEAADTVGISVAGVRWSAVLVGGVFAGLGGAYFTIG TVGSFSKDITVGNGFIALAALIMGRWRPGLAAVMALFFSFVTQLSTELSTISAPMPSQFL LILPYIATIVAVAGLVGKVRAPASDGTPYIKE >gi|302034468|gb|GL383167.1| GENE 181 179879 - 180319 203 146 aa, chain + ## HITS:1 COG:ML2174 KEGG:ns NR:ns ## COG: ML2174 COG0295 # Protein_GI_number: 15828164 # Func_class: F Nucleotide transport and metabolism # Function: Cytidine deaminase # Organism: Mycobacterium leprae # 11 131 3 123 134 157 60.0 5e-39 MAPLTSRSDVDVDWDALRCRAHELTKRAYVPYSHFPVGAAGLAEDGRVVVGCNVENAGYG VTLCAECGLISDLVAGGGGHLLAFCCVDAMGETIMPCGRCRQLLWEHGGPTMLIDTPAGV QTMTEVLPQAFGVDNLDRVANQQEKS >gi|302034468|gb|GL383167.1| GENE 182 180316 - 181218 503 300 aa, chain + ## HITS:1 COG:ECs0210 KEGG:ns NR:ns ## COG: ECs0210 COG0328 # Protein_GI_number: 15829464 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HI # Organism: Escherichia coli O157:H7 # 7 136 10 141 155 102 43.0 1e-21 MIVAAADGSSLNNPGPAGWAWYIDDDTWAAGGWPRGTNNMGELKAVLDVLRATRDADEPL TILCDSQYAINCCTKWIPGWKRKGWRKRDGKPVLNRDLLEPIDEELDGRDVTFEWVKGHA GHAMNEAADQRARAAATAFRDGTPVDHGPGFGRVDRDPQPQEDVPRPGNGDEQERLFDLP ERPATPDQELIGILTDKERRFLETDAIAHRSALEELAAPDFIEHDGNGRLWTRGRALADM PVPEVRASIEILGMVRIGPQDVLLRWRARAGSRVSVRVSLWHRDPDRGWQLRFHQITPVR >gi|302034468|gb|GL383167.1| GENE 183 181328 - 183106 1552 592 aa, chain + ## HITS:1 COG:Cgl0868 KEGG:ns NR:ns ## COG: Cgl0868 COG0143 # Protein_GI_number: 19552118 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA synthetase # Organism: Corynebacterium glutamicum # 1 589 1 608 610 803 63.0 0 MCANVLAAVAWPYANGPRHIGHVSGFGVPSDVFARYMRMSGHRVLMVSGSDCHGTAISVK ADQEGVTAQECAEKYHRIIAAGLQGLGLSYDLYTSTLTDNHADVTQEIFTRLHENGYVVK RSEMGAFEPSTGRTLPDRYIEGTCPVCGYDDARGDQCDNCGRQLDPADLIDPRSKTTGAA PEFRETEHFFLDLPALAESLASWIDTRTDWRPNVLKFSHNLLEELRPRAITRDLDWGIRV PVEGWQDNPMKSIYVWFDAVIGYLSASIEWARRIGRPDAWREFWNDEDARSYYFMGKDNI VFHSVIWPGILLGTNGRGDKGGEPSEELGTLNLPTEIVSSEFLTMSGSKVSNSRGATIFV GDFLHEFGPDALRYFIAVAGPENQDTDFTWEEFVRRVNFELANEWGNLVNRSISMAFKNC HEIPAAGELTDADRELLDAAATGFDTVGGLLAHARFKAAITEAMRIVGLANAYISAEEPW KLKDNPERRDTVLHVALQVVSDVNTMMTPFMPHSAQKIYEALGGEGVWAAQPELIETDGA PILMGDYATEQASWGRHEIAVGTPLSKPSPIFRKLDAKLAQTGPQWAPVNPQ >gi|302034468|gb|GL383167.1| GENE 184 183108 - 183740 415 210 aa, chain - ## HITS:1 COG:SA1710 KEGG:ns NR:ns ## COG: SA1710 COG0847 # Protein_GI_number: 15927468 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, epsilon subunit and related 3'-5' exonucleases # Organism: Staphylococcus aureus N315 # 40 203 3 162 184 98 38.0 7e-21 MALQKWPNRGASNATPADFMSTRRTQRRSFFVPSPSQIAEPSFVAVDFETANRMGGVSAC QVAMVKVLDGQIVDRLNTLIRPPKGWDSFEFTYLHGISAADVADAPGWINIADTVSHFVD GATVYAHNAAFDSRVWRQLDEHFGTTTLPAPFFCSYRTAQRLIPGLPNYKLPTVLHACAP NYQLNHHRADSDAEACALIVCELQRRAQTS >gi|302034468|gb|GL383167.1| GENE 185 184030 - 185682 1186 550 aa, chain - ## HITS:1 COG:MA2503 KEGG:ns NR:ns ## COG: MA2503 COG0477 # Protein_GI_number: 20091334 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Methanosarcina acetivorans str.C2A # 17 480 3 466 533 186 29.0 1e-46 MSDASSAATAAQPFPGRWKALAILAAGLSLIILDGTIVGVALPTMISALNLNLTDAQWVN AIYNVIFAALLLGAGRLGDRIGRRTTFATGVVLFVGGSLLAATASGPGSLIASRTVQGVG GALVLPSTLSSVNSLFQGKDRAAAFGIWGAVMSGMAALGPLLGGVLTEYASWRWIFWVNL PLGLLVLAGIAAWVPQTRGKPADKGVDVDGVLTSAIGFGLLIFGLIEATTLGWWDKKETF KIFGWEWPASWSMSPVPWAIAIGLVFIMLFIAWEHHRAKVGRDALLDLTLFRVGTFSWGN LTAATVAIGEFSLTFVLPLFLVNSLGLSTVRTGIVLAAMALGAFFSGASARHLAARMGAT GVVVLGLALEVIGVGLLAWVVGMQGSTWLSVLTLIVYGVGLGLASAQLTSTVLHDIPADQ SGAGSATQSTVRQLGSALGAAIAGTALGSAMNHTIPDAVASISAVPTRVLDKLVHTTEDS AGSAIPGLRNASPNSPFLRPLGESRGAVISSLETGFAHAAAWSIGLSSLFLVIGLLGAIM VRYEARRQVG >gi|302034468|gb|GL383167.1| GENE 186 185763 - 186344 264 193 aa, chain - ## HITS:1 COG:no KEGG:PPA1725 NR:ns ## KEGG: PPA1725 # Name: not_defined # Def: putative uridine kinase (EC:2.7.1.48) # Organism: P.acnes # Pathway: Pyrimidine metabolism [PATH:pac00240]; Metabolic pathways [PATH:pac01100] # 1 193 25 217 217 354 93.0 1e-96 MARTIILLAGPSGSGKSRLTHMADLPELRLDDFYRDHDEPGLPMVRDMVDWDDVSSWNLP VAVEALGELATTGHTVVPCYDISRSRADGNHVVEVGDARAVVAEGIFAPDLLEPCLQAGL NVLPIWLDRPRWLNFARRLVRDLRQHRKSPPVLIRRGLTLCQAEPALRSRAIVMGFQPMS MRRASTTVAALMG >gi|302034468|gb|GL383167.1| GENE 187 186599 - 188272 1353 557 aa, chain + ## HITS:1 COG:ML2546 KEGG:ns NR:ns ## COG: ML2546 COG0318 # Protein_GI_number: 15828369 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Mycobacterium leprae # 24 534 58 536 548 194 31.0 5e-49 MGFDSQPLRAYVEHNFTYVAGLERNLHRFGDSPAMIDPVADRSWTYRELAADVERFAVVL SQHGVGPGDTFAFELFNTSQFAICYLAAHRLGAVGTVLNCRLAPGELACALRDARPKVLV YDAEVTSRVLPALEEVAPERETPTPSLIQVAPAGTSPDLPDGAVDFDTALSQADGRAPDR PSNLSTYDEVIRLYTSGTTGLPKGVPLPSFVEVMSAHDVIMHFPLTPQDRTLNMTPWFHR GGLHSGGPNPTFYVGGSVVPMREFDADTVLDWVGRYQITFLIGAPTALERLARAQEKNAR DLSGLKGIVTMGSPLDAGSARRYMEVLTPNISNGYGTTETFWNTFLRPFDLPGMAGTAGR ASTDDDVEVVKVFDDRIAEPDELAAKDGVEVGEVAMRSPKCGMSYSGETGSKDPKFHAGW FYPGDLATWDEHEFVTIVGRKDEMIISGGENVFPTQVESVLESHPSVLESIVVGLPDPEW GQLVVAYVVADPDAAAVTADELEAHCLASEDLARFKRPRAYRFVDKLPMTPTGKKKHVEA TAMACREADTFVRPRHY >gi|302034468|gb|GL383167.1| GENE 188 188304 - 189980 1340 558 aa, chain - ## HITS:1 COG:PM1074 KEGG:ns NR:ns ## COG: PM1074 COG1109 # Protein_GI_number: 15602939 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Pasteurella multocida # 18 536 8 531 551 426 46.0 1e-119 MTTTRPERLSPELVAEVQSWLDQDPDEATRTELSDLLVRAQSGEAEAIAAVKSAFAGPLT FGTAGLRAALGPGPSRMNRVVVQRAAAGFASWLRSHSSRGGTVVIGFDARHNSDVFARDT AEIMAGAGFHALLADSPIPTPVTAFAIKHYGAVAGIMVTASHNPPADNGYKVYLGDGSQI VPPTDAEIAHEIEVVSEEPVGAIARGDDIEFIGDELIDAYVCRAAKLTTANPDVTWVYTA MHGVGTRVVRRLVEKAGLPEFIGVTEQLNPDPDFPTVAFPNPEEPGAIDLAIAQARKHDA DVVIASDPDADRCAVAAVIDGDWRMLTGDELGTLLGDDALRRGLDGVYANSVVSSTCLGR MAKAAGRKHHMTLTGFKWIGRVPGLVFGYEEAIGYCCDPSHVPDKDGITALATILRLVGE LKASGTTIAERLDEIWAAHGLHRTSQLAVRVTTMSIISQAMDRLRNQPPATLLGDRVDVC DLDDPSNGSGLPQQNAIELTGPRVHVVTRPSGTEPKLKCYLEVRATPAESAADLSATKAR LDADMTTLRDEMSQALGI >gi|302034468|gb|GL383167.1| GENE 189 190007 - 190819 735 270 aa, chain - ## HITS:1 COG:ML0707 KEGG:ns NR:ns ## COG: ML0707 COG0005 # Protein_GI_number: 15827299 # Func_class: F Nucleotide transport and metabolism # Function: Purine nucleoside phosphorylase # Organism: Mycobacterium leprae # 8 268 7 266 268 221 50.0 1e-57 MTSPEFTDPQAIARNAADAIRSRLSLTSVDMGLVLGSGWSAGVDRLGTTLGRIPLSELPG FFAPVVAGHGGDLVAVALPSGKTAVVLTGRTHFYEGRGVEPVVHGVRTVAALGATTMILT NGCGGLDPSWGPGTIVAIRDHINLTGATPLRGATFIDMSTAWTPRLLEVTERVAPGTPTG VYAQFRGPQYETPAEVRMARTIGADLVGMSTALEAIAAREAGLDLLGLSLVTNHAAGVTD APLDHAEVIAAGKQAAPRLASLLADITAAI >gi|302034468|gb|GL383167.1| GENE 190 190728 - 190898 117 56 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSTLVRDRRERMASAALRAMAWGSVNSGDVMGLTLEVFAVSGVPALAMCCDFRQLG >gi|302034468|gb|GL383167.1| GENE 191 191008 - 192387 571 459 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 4 417 6 414 458 224 32 3e-57 MTSMVIIGAGPGGYEAASVAAAGGVEVTVVEETGIGGAAVLTDCVPSKTLIATAEVTSTL RRAAELGLRHTETFEVDLDAVNSRVRQLAQAQSDDISRGLERKGVRLISGRARLATGAPG HLHRVVINDDETIDADIVLLATGTTPRELPAARCDGERILTWKQVYSMREVPEHLIVVGS GVTGAEFASAYDSLGCPVTLVSSRDQVLPGEDPDAAQVLQQVFESRGMEILSRSRAVSAI RDGDGVVVGLEDGRTVRGSHVLMAVGSTPNSADLGLEEVGVAVGPRGHITVDKVSRTNVP GIYAAGDCTGVFALASVAAMQGRIAVWHALGQALQPLDLSLVCSNVFTSPEIATVGVTQT DVDSGKVQARSTRLDLSTNPRAKMQGLHDGFVKLFCRPATGNIIGGVVVSPRASELIHPI SVAVAERIPVDAFQHDFTVYPSLSGSVSEAARRLQTFVA >gi|302034468|gb|GL383167.1| GENE 192 192426 - 193148 617 240 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4773 NR:ns ## KEGG: HMPREF0675_4773 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 240 11 250 250 430 100.0 1e-119 MSGNLLLFLLFFVGLVATTTSLMRAQRQSRELEAQRAKAIQAKVSQMRQETEEDVTTFGE ALRDLDMEMVGKDISADGRKDWNMALDCYDRAKTLMAQDKSTRSIPLVTETLEEGRHAIA CVQARANGEPIPEVRPPCFFDPAHGPSTTDVMYSPDGGVARKVPACAADAQRVQQGRSPW IRTVDVNGAQLPYWQAGPDYAPWVQGYYRRYESDPVISGLAVGGLGLVGLGLFSALFDDF >gi|302034468|gb|GL383167.1| GENE 193 193205 - 194974 1288 589 aa, chain - ## HITS:1 COG:Cgl0680 KEGG:ns NR:ns ## COG: Cgl0680 COG4770 # Protein_GI_number: 19551930 # Func_class: I Lipid transport and metabolism # Function: Acetyl/propionyl-CoA carboxylase, alpha subunit # Organism: Corynebacterium glutamicum # 3 586 6 590 591 674 60.0 0 MDRTIKRVLVANRGEIAVRIIRAAKDVGITSVAVYADSDSEGLFVKLADEAFALNGVTPA QTYLDVDKILDVARRAEVDAIHPGYGFLSENADFAQAVIDAGFLWIGPPPHAIRVLGDKV QARHIAQKVGAPLVPGTADPVDDPEEVVQFAKEHGLPLAIKAAFGGGGRGLKVAHSMDDI TPLYESAVREAVTAFGRGECFVERYLDKPRHVETQCIADHYGTVQIISTRDCSLQRRHQK LVEEAPAPFLSDEQLTRLYESSRAILKEAEYVGAATCEFLVGQDGTISFLEVNTRLQVEH PVSEEVAGVDLVQMMFHVAQGGHLTPEDPQLRGHSFEFRINAEDPGMGFMPASGTLTSWQ PPYGPGVRMDEGYHSGMTVPGAFDSLIGKLIITGDSREQALARAARALDEIVIDGMPTVI PFHQAVVHDPAFTAADGCFGVFTDWIETEFDNKIEPYTGSLGESANSEPPREVVVEVNGK RVEVRIPASLHGARQVPSTKSHRPTRRNRAGRRAAATGNSVACPMQGTIIKVNVVEGEEV NEGDQIVVMEAMKMEQPIAAHRSGIVRNLNAMVGSTVSSGEVVCEIIDE >gi|302034468|gb|GL383167.1| GENE 194 195229 - 195741 228 170 aa, chain + ## HITS:1 COG:Cgl2168 KEGG:ns NR:ns ## COG: Cgl2168 COG0494 # Protein_GI_number: 19553418 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Corynebacterium glutamicum # 1 149 1 157 178 113 44.0 1e-25 MATPQFILDLRRHIGHAPLWLAGSSAVVVRDGPRGPQVLLVQRADDGQWTPVCGIIEPGE RPDEAILREIHEETGVVAEVVRLVRVNVAAPVTYPNGDQCQFLDHDFLCRWVSGEPMVDD DESSHTGFFSIDQLPPMVPRHRRRIETALNPADTVIMSSDMVSPDIQEVR >gi|302034468|gb|GL383167.1| GENE 195 195738 - 196736 650 332 aa, chain + ## HITS:1 COG:RSp0665 KEGG:ns NR:ns ## COG: RSp0665 COG0598 # Protein_GI_number: 17548886 # Func_class: P Inorganic ion transport and metabolism # Function: Mg2+ and Co2+ transporters # Organism: Ralstonia solanacearum # 23 332 21 323 323 134 27.0 2e-31 MSLSQFSSRVWQYGKVIAESVPLETLNEELSDTRTLSWYDLTAPDREDIDILADELNLDF HTVEDAEAPGERPKVTRYPDHLFLTTYAATIGETDDPNSRLIVSRVSVWVFGHGVVSVHR NDLPEIAEVLNRLDANPDLVSNGPMGIVHAILDVLVDGHFDTVQHLDDVVEDVEDQLFDD SIDTQQVQLRVYRLRKELVQFRRIVLPMREIVSTICRPSREAVAVPRVLEPYFNDLYDHS MRVSEWSDSLRDLVATIFETNLSIQDAKLNIVMKKLAGWAAIIAVPTFVTGWFGQNVPFL GDGRPLGLWISAVLVVASSVLLYLVFRREDWI >gi|302034468|gb|GL383167.1| GENE 196 196937 - 198343 751 468 aa, chain - ## HITS:1 COG:no KEGG:PPA1715 NR:ns ## KEGG: PPA1715 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 468 1 466 466 763 99.0 0 MKQRFKSPTTAVLTGVLIAGSALLLPPLPAKADAVNEIHAKAGDQASVSLTAYADSPFYK KLPSYVSDSLRDGLFYYTGYYLEDGAAAGLANLTALHPTDTQDNSHTLDGDPVLAYCIEK NSLQERYHQDTGTLTKWSELKPHYNDNLTNALPKIGWIAKNGYPSKALDELEKQANAANG NDDATGSDHRDAVTATQAAIWHFSDDFTLKSDDITEYENGRLISVPDSAKKHISSLYNYL IKKAVPVSDPLDSTSDARGTSDFAGAALSLEAGQRGHQDRIIVPIQPISPAPTPTPTPAP TPTPTPTPTPTPTPTPTPTPTPTPTPTVDVKVTTTADQTAEVGKPFGDTAHITGTVPEGA HITFKLSHKGLLPNMCGDSVITTKPVAVPAGNHIQPIDIASPKVTVGQAGTYYWVETLTD SNGKVLAQGKCGEHAETTTVTAPVVPTPTPTMIPVGPSHPGLMPHTGV >gi|302034468|gb|GL383167.1| GENE 197 199075 - 199545 491 156 aa, chain + ## HITS:1 COG:Cj0555 KEGG:ns NR:ns ## COG: Cj0555 COG0471 # Protein_GI_number: 15791916 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Campylobacter jejuni # 16 156 17 157 430 119 46.0 2e-27 MISLTIGLALAVSIAIGRVRKINIGLVAIPFAYIIGAFFMHIKPSDVIDLWPSHIFFAIL AISLFFGFAMANGTLAEIANGLLYRFRAAPVMLPVMIFLVSVLISALGAGYYAVMVLMAP IALLVCRKIGINPLVGALCADCGGRWGRTLWSASTG >gi|302034468|gb|GL383167.1| GENE 198 199524 - 200384 604 286 aa, chain + ## HITS:1 COG:Cj0555 KEGG:ns NR:ns ## COG: Cj0555 COG0471 # Protein_GI_number: 15791916 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Campylobacter jejuni # 5 285 156 430 430 163 31.0 3e-40 MVGLNGVIFRNLITGEKFSSNEAFVVSTTIFVVYLVMTFFIILTMLFISSHQRKRDGMMA QKVTFAEPIPLDRRQRTNVWLIGVFVVILLVPPILHLCMPHNSAVTWVNSRVDVSLFAIL FAVVCALMRVGEEKESLLHVPWSTLIMIGGMGMLVSIAVKAGTISLLAGWVGHTPRLLIP VVLCFLAAVLNMFGGSFVGVVAPALFPVVATLARATGMSPVLLYTSTTIGGLATGISPFS AGGAMVLGFTDKDERDDMFHREFAVGLPVCVGAALVVSFLCSLVLG >gi|302034468|gb|GL383167.1| GENE 199 200504 - 201307 795 267 aa, chain + ## HITS:1 COG:Cgl3018 KEGG:ns NR:ns ## COG: Cgl3018 COG0351 # Protein_GI_number: 19554268 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase # Organism: Corynebacterium glutamicum # 1 261 1 260 266 286 59.0 3e-77 MTKIALAIAGSEASGGAGAQTDLKTFHQLGVFGCTSLTCIVSFDPHNDWGHRFVPVDPQV IHDQIEAAVAVHGRVDAVKIGMLGTPTTIGVVAEALESYQFPKVILDPVLICKGQEPGAA LDTDNALREKLLPRADVVTPNLFETQTLAGVDEITSVEALKDAAKRIGDQGVPVVIAKAG TLLDTGTALDVYYDGHDCEVLEVPAVGQERVSGAGCTLAAAITAEIAKGASALDAVRTAK QVVVSAIENRMHGNAPFDCVYQGNYRA >gi|302034468|gb|GL383167.1| GENE 200 201411 - 202145 430 244 aa, chain - ## HITS:1 COG:DR0411 KEGG:ns NR:ns ## COG: DR0411 COG1028 # Protein_GI_number: 15805438 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Deinococcus radiodurans # 20 240 7 224 227 138 41.0 9e-33 MKAPTTSEISHNSHGAKSVLVTGATRGIGRAIADELGRDHHIIVGGRHQEAVDNVVSELP NASPFVVDLTDEEATAAAVSHLDHLDVLINSAGVSAASPGDIASQPRDEWRRVLEINVVA VAYLTRLVLPLLRASHGDVIMINSGSGFLRTPASGGVYAASKYALRALTHALREEERGVV RVTSIHPGRVDTDMQVELQAQAGRPYNAADHLRPQSVAVTVRAALEASPDAMIEELSVRP VFRG >gi|302034468|gb|GL383167.1| GENE 201 202342 - 202761 251 139 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4763 NR:ns ## KEGG: HMPREF0675_4763 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 139 1 139 139 209 98.0 4e-53 MNARAAVAVTVLLVVAGCAPSHGGAVPSPSAASATPAPAGAETLANLGFKYGPRNFRLPK GLAVTLRVDHVNNITLLTGPDTSGKVHDFLADNLSASGFTVTGNANGSLTFISNRGDTKG WSGGFTSSDEAAGLTLRHG >gi|302034468|gb|GL383167.1| GENE 202 202907 - 203122 123 71 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MMSSIHPVIGKQSFRLRRRKSEVSISPWDNPVRKDALKDIAAASMRSPVGSLAVMLITLT QHLLHVEGSHG >gi|302034468|gb|GL383167.1| GENE 203 203336 - 203929 379 197 aa, chain - ## HITS:1 COG:all3075 KEGG:ns NR:ns ## COG: all3075 COG0424 # Protein_GI_number: 17230567 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Nucleotide-binding protein implicated in inhibition of septum formation # Organism: Nostoc sp. PCC 7120 # 1 188 18 196 197 132 40.0 3e-31 MLRSAGIEPVVIASGADESHLRGEDAVAMTARLSRLKAHSVIESGALEEYPADRMIVVAC DSVLNLDGRILGKPHTAERARQWWRRMRGHQGVLVSGHHVAVIVNGQLREQTRIGQTVVT FADLTDAEIDAYVDSGEPAAVAGAFTIDGLGGAFITRINGDPHNVTGISLPLLRQMLMDL DVEWSSLWNGPKGGHLS >gi|302034468|gb|GL383167.1| GENE 204 203979 - 204194 274 71 aa, chain - ## HITS:1 COG:no KEGG:PPA1708 NR:ns ## KEGG: PPA1708 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 71 1 71 71 136 100.0 2e-31 MNDAITVTKGNLTDEELGALVTVLAELTRPSPNAYVPDDRPIAFGWKSYWRTIREPFMPG QAAWRGSLRRY >gi|302034468|gb|GL383167.1| GENE 205 204206 - 205780 1546 524 aa, chain - ## HITS:1 COG:ML0731 KEGG:ns NR:ns ## COG: ML0731 COG4799 # Protein_GI_number: 15827308 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) # Organism: Mycobacterium leprae # 3 524 20 549 549 686 64.0 0 MEIDIHTTAGKIADLGRRIDEAVNAASPSAIEKQHATGKMTARERILRLLDEDSFTELDE FARHRSTNFGMDRKRPYTDGVITGVGAIHGRPVCVFSQDVTIFGGSLGEVYGEKICKIID FAVKTGCPLIGINEGGGARIQEGVASLARFGDIFRRNTRASGVIPQISIIMGAAAGGHVY SPALTDFIVMVDQTSQMFITGPAVVKQVTGEDVSLEELGGARTHSVKSGNSHYLANDEDD ALEFVRGLISYLPQNNLEDPPFYDDGEADLTITDHDRKLDVLIPDSSHQPYDMHEVITTV LDEDTFLEIHELFAPNVICGFGRIEGRAIGIVANQPMINAGTLDIDASEKAARFVRTCDS FNIPVLTFVDTPGFLPGVEQEHDGIIRRGAKLIYAYAEATVPLLTVVTRKAYGGAYIVMG SKTLGADVNLAWPTAQIAVMGAEGAVSILHRRTLATDPDPQAKRKELIDEYETTLSNPYQ AAERGWIDQVIHPHETRASVIRTLRLLRTKRETLPPKKHGNIPL >gi|302034468|gb|GL383167.1| GENE 206 205873 - 206244 345 123 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4758 NR:ns ## KEGG: HMPREF0675_4758 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 123 1 123 123 157 100.0 1e-37 MQTLYEHSRRILAVFLIAALLCLAIIGPLPDTQSSATLTCTTTGIAAIFLVVVASHADPH FGLDSLAFIVTFLASAVCRRAATNPVSHSLYLPVIITAVALAAVAVVLRASASVSRQETT ASQ >gi|302034468|gb|GL383167.1| GENE 207 206499 - 207215 558 238 aa, chain + ## HITS:1 COG:Cgl0689 KEGG:ns NR:ns ## COG: Cgl0689 COG0340 # Protein_GI_number: 19551939 # Func_class: H Coenzyme transport and metabolism # Function: Biotin-(acetyl-CoA carboxylase) ligase # Organism: Corynebacterium glutamicum # 1 236 43 267 269 104 34.0 1e-22 MAAFVRAGGTSFCLLVADHQEGGRGRFTRSWQDVPGTSLAISALVPNDRPSQDWGWLSMV AGLAVVKVIKEVGGADRSRVTLKWPNDVLVDLDTDQGGKVCGILSERVDGPAGPHAVIGI GINVSMGRDELPLPTATSLALCGLNHDKNELLASLLIHLDELLTVWLETGTVRDQYVARC DTIGTPVRLTFDPEIVGGGEGAIEGIGVDVDVDGAIVVETSDGRRSFNAADVHHLRTR >gi|302034468|gb|GL383167.1| GENE 208 207263 - 207979 575 238 aa, chain + ## HITS:1 COG:BS_ygaJ KEGG:ns NR:ns ## COG: BS_ygaJ COG3340 # Protein_GI_number: 16077943 # Func_class: E Amino acid transport and metabolism # Function: Peptidase E # Organism: Bacillus subtilis # 1 214 1 223 251 170 41.0 2e-42 MTTHILALGGGGFSMSNRGEPTALDRHILDLSGKSSPLVCFAPTAAADDPVYVNRFLAAY SALGVRNMVLTLWQGAAESVERLSQADIVVSGGGSAANLMALWKMHGVDHVIRRMIAADS DVVLAGVSAGAACWFSGCLTDAFGDLRAWRGGMGLLDGSFCPHFDGESERAPIYAQAVAN GVLPGGYAVDDGAAVHFVDGMFAGAVAEHERAEVSRFSASDEPTSSGVLREELDVTVL >gi|302034468|gb|GL383167.1| GENE 209 207966 - 208496 348 176 aa, chain - ## HITS:1 COG:no KEGG:PPA1703 NR:ns ## KEGG: PPA1703 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 176 1 176 176 298 99.0 8e-80 MVRVGQPLRHNRNETVLVHTRRHAKALFWPVVMGFVGVVGAAALLGIMPSDMRAQYWPIV VTIAVALIIVGTLSPWLTWFTTTMTITDRRVMLRHGVVVRRGHDVMIDSLIDVSWQAALF DRMMGCGTLILTTPSDQMVLNDVPGARRVVDLFTDLTDNGYGEYLNDYCEESVTAR >gi|302034468|gb|GL383167.1| GENE 210 208603 - 209775 960 390 aa, chain + ## HITS:1 COG:MT3376 KEGG:ns NR:ns ## COG: MT3376 COG0026 # Protein_GI_number: 15842866 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) # Organism: Mycobacterium tuberculosis CDC1551 # 4 384 12 393 429 333 50.0 4e-91 MNVVTSYTIGIIGGGQLARMMHQAAIGLGVRTRLLASDPEESAAQVMSDVVVGSHLDHDA VMNFAAGCDVVTFDHEHVPTVLVEEMEEAGYAVRPGAAAMVHAQDKVVMREFMEREGFPN PAWQVCDTPEDLVSFGHDRGWPVIAKTSRGGYDGKGVFKIDGPDGAGEPFDAAGDLADGK QPIRILAEEFVDFRRELSAVVVRSPSGQGAAYPVTETIQRHGVCAETISPAPDLSSDRQV ELQTMALDIAGRLDVIGVLAVELMEREDGSVVVNELATRPHNTAHWTIDGAETSQFGNHM RAVLNLPLGSPALIAPVVVMANVLGGSEEDLTGALQHCFARDPELRVELYGKSVRPGRKV GHVTCLGNDIETTHRRARHAAAYLMGEHDA >gi|302034468|gb|GL383167.1| GENE 211 209768 - 210358 509 196 aa, chain + ## HITS:1 COG:Cgl0694 KEGG:ns NR:ns ## COG: Cgl0694 COG0041 # Protein_GI_number: 19551944 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase # Organism: Corynebacterium glutamicum # 33 192 2 161 165 186 64.0 2e-47 MPETTTASRKPRRGEKVKTTTGGARRLACDANGPQVSIIMGSDSDWPTMEPAAQVLTDFN VGFEADVVSAHRMPEDMIEFGRGAHKRGIKVIIAGAGGAAHLPGMVAALTPLPVIGVPVP LAHLDGMDSLLSIVQMPGGVPVATVGVGNAKNAGLLAVRILAASTPELCEAMVKYQSDLH DVAAGKGEKVRRHSCP >gi|302034468|gb|GL383167.1| GENE 212 210419 - 212380 1050 653 aa, chain - ## HITS:1 COG:TM1193 KEGG:ns NR:ns ## COG: TM1193 COG3250 # Protein_GI_number: 15643949 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase/beta-glucuronidase # Organism: Thermotoga maritima # 1 652 353 985 1087 270 30.0 8e-72 MRADLELMKRHGVNAIRTSHYPPNVRFLDLCDEYGVWVLLECDLETHGFERGGWDGNPTN DDRWYDCLLNRIQRTVERDKNHPAIIGWSMGNESHCGEGIRLMNDWVKNRDPSRFTHYEG DDAHAICDVWTVMYPSMEWVEAVRDRTVMPGAEPAPQTGRELGLPFFMCEFAHAMGNGPG ELDAYEERCFDPHFHRDRMHGGFIWEWIDHGIDTGRGYAYGGDFGEVLHDSNFVCDGLVL PDRTPSPGLLEFTATMGAVRIEVDSEQLRDGNGITVINRRDFSDLSDLTFVWQLIDDDEY VQTGVLEVGALAAHQIWTGTVPLPDEISDRMVVVVEAKLVRDTIWAPAGHVVARTSALLV PKPGPRLYLPASSQPHRDGTGWSLGPAHFDRRGRLVTWGNANLVAPVLDLFRAPIDNDRA SSLARNAIGDAALAAGLDRLVHTTTSVRDEGDELVVVTRSAAAAARNSMTTTWSWRAIQT NDGSEGVHLDLHVDPHGYWPTMLGRIGVTIGLPAEWTTVSWFGLGPTENYPDSQHTAIWG RWNGEVDDLQNPYAMPQENGLRQGVHELTISGSNGGLRITADGSWPAFAARPWTSQALLT AAHTWDLKPDGHTWLTLDAVSAPLGSTSCGPMPIMSHRLYAQPVDLSLTLSLI >gi|302034468|gb|GL383167.1| GENE 213 212356 - 213375 636 339 aa, chain - ## HITS:1 COG:TM1193 KEGG:ns NR:ns ## COG: TM1193 COG3250 # Protein_GI_number: 15643949 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase/beta-glucuronidase # Organism: Thermotoga maritima # 38 315 43 335 1087 166 33.0 4e-41 MVANADTAHRLDDALTNLIPWHGPVAPRAHLHTDAPTLDLSGTWRFQLVDSPHDAPAGFP DPQFDDTDFVDLAVPSSWHMVDPAGNAPFGRPAYLNTNYPILVPASDEDIVVPNENPTGC YRHTFEVGKEFTDAKRVLLRFEGVDSFARVWFNGVELGWTKGSRLTSEFDVTSQLRSGRN VLAVAVSQWSDGTFLEDQDMWRMSGIFREVTLLARPHGGIDDLFVHASWDGDAKLLIDGP EGATVAIPELELATTCNTEVAIPDAQPWTAETPKLYDATVSTDTETVTIRIGFRSVAIAG DIITVNGEKSYSVGLTATNGIHAPGEPSVSRRCALTSSS >gi|302034468|gb|GL383167.1| GENE 214 213595 - 214515 622 306 aa, chain - ## HITS:1 COG:Cgl2840 KEGG:ns NR:ns ## COG: Cgl2840 COG1316 # Protein_GI_number: 19554090 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Corynebacterium glutamicum # 2 295 1 288 288 180 38.0 3e-45 MLLLAWVVWLVAVPSYALGHTGTVDATPDGPRGADHPGTLVLLVGTDERQNLTPRQQKQL GTGTEAGLRTDTMLLLYMPPEGKDVLISLPRDTFLRIPGHHHNKLNAAYSMGGAKLLVQT IEKATNLRINGYVEIGFGGFVQMVDAVGGVHVTLNKPMVDKDSHTNLPAGPQNLDGVQAL GYVRMRKADAEGDLGRVKRQQQVAAQVAKKTLSPWTFINPVRYWKVNMAASKAVKLGTDT SILTAFKTARGLMKVSGNDGIKMTVPVSTASAYTSAGSSVLWNDNKAAQLWDDLRSGDTS KVTELS >gi|302034468|gb|GL383167.1| GENE 215 214692 - 214880 56 62 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|314967369|gb|EFT11468.1| ## NR: gi|314967369|gb|EFT11468.1| hypothetical protein HMPREF9619_00026 [Propionibacterium acnes HL082PA2] hypothetical protein HMPREF9582_01869 [Propionibacterium acnes HL060PA1] conserved domain protein [Propionibacterium acnes HL103PA1] # 1 62 49 110 110 111 98.0 2e-23 MHLDGAGGAGLSVDDPSYRTCRAAGSLDRYEWRRFRQPRIASPGQTDEIARRGACAQCLD KT >gi|302034468|gb|GL383167.1| GENE 216 215095 - 216006 767 303 aa, chain + ## HITS:1 COG:AGl1604 KEGG:ns NR:ns ## COG: AGl1604 COG0463 # Protein_GI_number: 15890918 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 3 297 48 328 338 137 32.0 2e-32 MEIILAIAPSTDRTAEIAQDLAVRDDRIRVIDNPDGTTPKALNLGVAVSQYDIIVRVDAH GELGPEYIATAVELLERTGAANVGGIMDAKGRTPFEQAVAVAYTSKLGLGNSAFHQGDAP EGPAETVFLGVFRKADLEAVGGFCPEFDRAQDWELNYRLRQSGREVWFSPNLRVTYRPRS TVKALAKQFFRTGQWRREVMRRHRDSVSLRYVAAPIAVTGITAGTILGLIGVVHAAKGTS LKRWPLIGWAAPLGYASIIGVGSAAMKRDLDPGVRARLPLVLAIMHMSWGAGFLVGLGDR AND >gi|302034468|gb|GL383167.1| GENE 217 216009 - 216740 370 243 aa, chain - ## HITS:1 COG:no KEGG:PPA1697 NR:ns ## KEGG: PPA1697 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 243 1 243 243 427 99.0 1e-118 MGAMVSLTRPTPTRSSDPLTALCQRSQNAGALPLLTWYHGADRGELSARTLLTWVTKSVY LLDSEGVEPGGVPRLSVCGVRPGHWTSCVWLLASWWAGLRVDLTGQEEAALEVIGPDVAP VNSPDVLIQCSLAPLATACETLVPGAIDNADVLAAPDDLVAARPAATNAVWLTGRQEWTG EQLFSLVPLNQPVLLSPDRIRLGGSELVATTLTSCLLGGGSLVLVESTDDLATIAAQEGA VDV >gi|302034468|gb|GL383167.1| GENE 218 216808 - 217884 667 358 aa, chain + ## HITS:1 COG:DRA0032 KEGG:ns NR:ns ## COG: DRA0032 COG0836 # Protein_GI_number: 15807702 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Mannose-1-phosphate guanylyltransferase # Organism: Deinococcus radiodurans # 5 351 17 364 372 229 38.0 7e-60 MQHILILAGGSGTRLWPLSHQGEPKQLLELIDGVSLLRMAYERVAGLVPDANILVCTGSS YADTVAKLLPEVPAENILGEPVGRDSLSAVAWPAGIIADRDPDGVMAVVTADHIIRPVDD FRAALQHGFDLANTDPTALVTFGVVPTEPNTGFGYLHRGGRLRPGSRAHQVLEFVEKPSA EVARQYLDSGEYWWNSGMFVWRAATLLDCLSQLKPQTRHHVDELVADPSRLAEVYPCMEK VSVDIAVMEPASHGGCGVHVAAIPLEIQWYDVGSYEALAPHLPSDGMGNNVSGLTVSVDS AGNLLINDRPDAVLAVAGLHDMAVVSTDRATLVVPMSQSQQVKAVVAEVAARAGARYA >gi|302034468|gb|GL383167.1| GENE 219 217881 - 218576 286 231 aa, chain + ## HITS:1 COG:no KEGG:PPA1695 NR:ns ## KEGG: PPA1695 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 231 1 231 231 326 99.0 4e-88 MSNAREIREPLAWTVIVVSVGFLVAFVVRVVKMLTHDRSGLFGMARSLSGSSLGIGMILL LLAAVLVCRFIHPATPHAELLGKVSACVVAVAAGCDLVLALLSPIHGPGGAFGAALGLFG DLLAIAIKALAAWVLLVLTRPEAASVQDNEDPAEPEAVQDGSADRSVVADEAEGPAHGDE VSWPAGVGAVWTRAGDAASGAGASSWDQNDAGGGWTTEASGPSRDEPDGQA >gi|302034468|gb|GL383167.1| GENE 220 218753 - 219010 338 85 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4744 NR:ns ## KEGG: HMPREF0675_4744 # Name: whiB_2 # Def: transcription factor WhiB # Organism: P.acnes_SK137 # Pathway: not_defined # 1 85 1 85 85 154 100.0 8e-37 MDEILTLLAGGGDDEPEWHDKALCAQTDPEAFFPEKGGSTREAKRICESCEVRQECLEYA LANDERFGIWGGLSEMERRRLRKRA >gi|302034468|gb|GL383167.1| GENE 221 219159 - 222488 1773 1109 aa, chain + ## HITS:1 COG:no KEGG:PPA1693 NR:ns ## KEGG: PPA1693 # Name: not_defined # Def: putative glycosyl transferase # Organism: P.acnes # Pathway: not_defined # 1 1109 1 1109 1109 2022 99.0 0 MSDEKYSAETGPGESHQCDRSDAPRTAEGLTDWTILVIPSTRIDPEDWAWAHEQRKPVDP DITVDQVAAILLVHQAAGWLPRALNALRRSGERAAVQIAVDLGSTDGSSDLLVAAVDEGL LDECVTASADTTPGEGINLAIDRLSDGVTHIWILHDDVEVRRDSLTCMLREASRKPHPDV LYPTLLKPARHNYPEFIDEQGQSVSTGGARVLPVVDRGDIDQKQADPGPILGGSTAGMFV RVDVWRRLGGFDPALPLFRDGVDFGWRANEAGMVVRTAPSCTIHHRQAGRGWQRESHLAP RPDVTDRLAGMRMVAARTGHPTRTSLALLVASVWRFLVLMVGKAPSRAVDEWRSGLQLWR SRSVTREMTQRLQDFHAQCDPDDLENTNRLLPSRRSVWVRAVDRYAGDLSDRIHPWRNED GTTIDDLTGDDFTVRDHRSVVNPYTVMVSLMVVIGIVACRGLYGSGRATSTWLAPAPCGL AGAWHRWLTAVPGLSGGNAPWLAWPAFGSVLTIGEPEVLVRILLVVTPLLTAMSAHRLFR RVVGLGTTTVLLASFWGMLPVLTGGLARGSVTALALGVILPHMALHTWRLVNPETVDVVE LRGADTGSHQVGGVSSAGGLALWSALAISLVPALWVYPVAVAVGILMTRPRRLLLGSIVV LGPLLVISPWIPRLITEPGRMATGAEPVLSPAVETRAGLWLLVGRAIVPGTAPTVFTVIA MAPLWIAALWAVWRLVIDRSASIGSLTGHPRGRVLALTIVYLVCLVLTGVASRTLVTVWN VQVHPAIEPWQLVGAGVLLILVAAARQPAMLQRAEADHLPADESPTLGQLLVGIGNRWLP WVLTISVAASGVWWLVGGARGPMSTTAATRPAYVTAVEDSARHTRTLMVNVHSGSAHWNL VDSNNPSWGSGERPTISSDSRIADSAADLARAVATGAVPDDLADRLSDLGIGHLWLRGAG ADVVSQVGNASGLAAANTDPTTTVWTVDGHPSRALLSSRGSGQVPVAGKVTESGTVTILE PRDHRWRVEVGGTRLSPAVRHGIGESYQVGSARGDLTWSMPTQRWAGAIELVALLILLVV AGPQAAQRNRIAAPRRSLSRKPRRRQEES >gi|302034468|gb|GL383167.1| GENE 222 222485 - 223987 658 500 aa, chain + ## HITS:1 COG:no KEGG:PPA1692 NR:ns ## KEGG: PPA1692 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 500 1 500 500 787 99.0 0 MSDRPRRALADDEEPEEIPEVRFVEEGAIPARRAAGSENVSDQPTPHAARAMAQVPASGE DSCDELTEPDKKAGRYWKGPVWAVTLAIVAIAMSLATSVIPPMQRSAAKVQPISSGRTLV CPPSQGKASLAAGSSGGSLQVGISVEKLSEASVPVMTNVDTSAGYIRSTAGQRRPSGSAL SSEGGMTTWVPCIGAATGGAVSVTNPSTSDLVVVNSDIRAATVDVTMLGPKGEIVTAGMR GIRVSPGQTKVLPMSVWDNGATPVTALVNAREGRVVVGARMWAGQGHDTSAMTQAAKTLF LPAVPAKVSTATLIISNPGTRRLSVSVTALAGRGPFTPDGADEIDIDPRSTIQVDLSKAL AGEGVGLRLSADDPVIARLFVQGKPGTTDNALVSPGGSSKVLEQTVGTAGTLELSNPGRE AVTFSGELTGTHGEKTAIEGTVPAGSTWSGKVPAAGHLHIVGSAPLIGGVISASGLAVLP LEAVAAMTNGRSVDVDPQLR >gi|302034468|gb|GL383167.1| GENE 223 223993 - 224412 237 139 aa, chain - ## HITS:1 COG:no KEGG:PPA1691 NR:ns ## KEGG: PPA1691 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 139 23 161 161 263 100.0 3e-69 MSKRRNRHSRGQRGPVVLPRSYGGRIDRVDPTHAEFFTACLTQAVQQVHMSCPGILDNVV VGAEDVPTMPDWTEGRVPLSSAVDGSEHSPAKIVIYRRPLELRTASRRGLAILVHRTLVE QLSALTGTPVETIDPSIDD >gi|302034468|gb|GL383167.1| GENE 224 224512 - 224919 144 135 aa, chain + ## HITS:1 COG:no KEGG:PPA1690 NR:ns ## KEGG: PPA1690 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 135 19 153 153 223 99.0 1e-57 MTISVWRTVPWVRECIRPGCSRPAVATLTYVYAERTAVVGPLGPSHEPGAYDMCAEHAEA LSAPVGWEVIRLPGIDNPAPDPPADDLMALAAAVREVGMLEDEVLPEPDPASVHVLGRRG HLSVITDASRDVTGH >gi|302034468|gb|GL383167.1| GENE 225 224929 - 225207 168 92 aa, chain + ## HITS:1 COG:no KEGG:PPA1689 NR:ns ## KEGG: PPA1689 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 92 1 92 92 164 100.0 2e-39 MPDLPLAPEALDLSPAFLEVAACPACHSRFALDFDSGELVCSSPSCGLAFLVRDGVPDLR LDAARKRETGQGVTAEDTEAFEPTHRHEMRPQ >gi|302034468|gb|GL383167.1| GENE 226 225204 - 226223 488 339 aa, chain + ## HITS:1 COG:no KEGG:PPA1688 NR:ns ## KEGG: PPA1688 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 339 1 339 339 568 100.0 1e-160 MTFDDSRLDAPLDALAERVLRQLASTGARIRRDSADLGEVRRTVGEWGQPRGVLVVGPEA RLVRSVLEPICPVPLVAWPFLRLPAWVGPLDLVVALDSDGRCAAQVAEARRRGSAIILAS SGETEAWQAAGSHGTARIQMASEDAMSAAVAALSVLSDLGLGPVVDPGQVARVADMVAES ASPHHDLAVNEAKDLACALADAEPLLWGGSVLAARASRRLAQWMRRATGRIALSADSAAL RPVIDSAPRRDPFADPDLDGETRRPVLVVMDDAETEHAAARRDLEQLCAAHDVTVRSVTL PLGIDEQSSPMSRYVALLLQGSFAAVYVALGLDRLKEMT >gi|302034468|gb|GL383167.1| GENE 227 226220 - 227251 1042 343 aa, chain + ## HITS:1 COG:L67760 KEGG:ns NR:ns ## COG: L67760 COG0053 # Protein_GI_number: 15673428 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted Co/Zn/Cd cation transporters # Organism: Lactococcus lactis # 23 310 8 287 314 161 37.0 2e-39 MSQAHAAQRPNGAKEPANPTQGGRKAIIAAASANLAIAVTKAIAWALTGASSMLAEAIHS VADTANQVVLMMGGKESHKEADEDHPFGYETARYLSGFIVAIVIFTLGGLFALYEAYHKI GATLGGHPDELLDSQWWWVPLAVVMISLCAEGASLRTALKESSQDREGMTILQYIRKAKA PELPVVMLEDSAAVLGLIFAFLGVGLTLLTHNPIFDGIGSACIGILLVVVAGVLSREMKS LLEGESAAPESRKAVYDALIHSDGVDSVIYMKTVHLGPETILLAAKIAVDPTDSAFEVAR IIDNAEASVRAAEPLVGPLFLEPDIRYGDKRIKDGEERPEDQS >gi|302034468|gb|GL383167.1| GENE 228 227248 - 227679 385 143 aa, chain + ## HITS:1 COG:MT2612 KEGG:ns NR:ns ## COG: MT2612 COG0757 # Protein_GI_number: 15842071 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate dehydratase II # Organism: Mycobacterium tuberculosis CDC1551 # 1 141 1 142 147 155 57.0 2e-38 MSKQILVLNGPNLGRLGRREPQIYGTTTHDDLAARLIEYGRELGLDVEVRQTDSEERMMG WIHQAADDRTPVVINPAAWSHYNIAIADALVQLVAPCIEVHISNIAAREEFRHHSVVSAH VTGTIAGLGLKGYELALSWLATD >gi|302034468|gb|GL383167.1| GENE 229 227704 - 227946 208 80 aa, chain - ## HITS:1 COG:no KEGG:PPA1685 NR:ns ## KEGG: PPA1685 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 80 19 98 98 150 100.0 1e-35 MSTQVAPSSSTAVEEKTRPSFDDGDAERFSHYVPKAKLTDAMVNGTPVVALCGKVWVPSR NPEKFPVCPECKEIFESMNR >gi|302034468|gb|GL383167.1| GENE 230 228308 - 229129 503 273 aa, chain + ## HITS:1 COG:no KEGG:PPA1684 NR:ns ## KEGG: PPA1684 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 273 1 273 273 512 100.0 1e-144 MTNATPPPMGWYPDPAGSEQERYWDGERWTRNLRNPPDPQPHPGVGHVPETLAPVSRVPS SPRPNAAVSRRGNADRSQSPAQSRWGSTADGVPLAGWWWRVLSTIIDAVLVWIVVGLTMH ETVASIVDGYQTFLATSMRAVNAGASPSDVVTMQSLMKAGFVSDLSNLVGAVIISQAIYQ FIMLAACAGSVGQLICGLRVVTLNKGKEHRRLVWWRALIRATVWACVEIGNQAIVLLTPF SYLMPLWQRSRQTIHDAVAGTQVVRPPHQSGVE >gi|302034468|gb|GL383167.1| GENE 231 229220 - 231328 1359 702 aa, chain + ## HITS:1 COG:MT1831 KEGG:ns NR:ns ## COG: MT1831 COG1640 # Protein_GI_number: 15841250 # Func_class: G Carbohydrate transport and metabolism # Function: 4-alpha-glucanotransferase # Organism: Mycobacterium tuberculosis CDC1551 # 1 699 1 713 724 723 54.0 0 MSLTDPHLTTLADHFGIARDYYDWKGQYTEVGEATVIAVLDGLGIDASTPERAERACHEV TNRKWRRVLPGIVVLREGQEGRGDVHVNAGEWVEVHVVCEDGQHRECWQVDNWNPDRHVD DRWIGEATFGIPGDLPLGYHTIVATTADHRATSTLVVSPNWLGLPRSMGSSRVWGHAVQL YSTRSRASWGMGDFSDLADLSTWAATQGADYVLVNPLHASQVVSPIEPSPYLPCSRLFLN PLYVRPEIIPEYADLDVYERSQARLARAQAAADVEAIDRDRSWNAKLPVLEAVHALGLEG SRELSYQAFRRLRGTRLGDLATWCALTEVYGNDWRTWPEEYQRPSNRAVSEFVRAHEERV DFFMWLQWIADQQLSAAQSAGRDAGMSLGLMCDMAVGVSGAGADAWMLGKLFADGVCVGS PPDAFNQAGQEWGQPPMRPDILADLAYRPFRDMVRAALRHAGGIRIDHILGLFRLWWVPV GLGPRMGTYIRYDHEVMVGILALEAHRAGALVVGEDLGTVEPWVRAYLRERGIMGTSVLW FENGENGNPLPPEQWREYAMSSVATHDLPPTTGYLAGDHVEVRHELGLLTESLEHERAEV ARQTATWIAILRERGVLVGDDPSEEDIVLAMHRMLTRTPSKVLNATLTDAVGDRRTQNLP GTTNEYPNWRVPLSHPDGSPMWLEEVFTDERAARLSHVMNEK >gi|302034468|gb|GL383167.1| GENE 232 231433 - 231708 460 91 aa, chain - ## HITS:1 COG:SA1305 KEGG:ns NR:ns ## COG: SA1305 COG0776 # Protein_GI_number: 15927054 # Func_class: L Replication, recombination and repair # Function: Bacterial nucleoid DNA-binding protein # Organism: Staphylococcus aureus N315 # 1 89 1 89 90 65 49.0 2e-11 MTKSELIKTVAKQASLTEAQTNEAVKALPDVITAALAKGEKVQLPGLFTAETVERPARNG RNPRTGESMTIPAHKAVKISASSTLKKAVAD >gi|302034468|gb|GL383167.1| GENE 233 231901 - 233241 1251 446 aa, chain - ## HITS:1 COG:Cgl2467 KEGG:ns NR:ns ## COG: Cgl2467 COG1488 # Protein_GI_number: 19553717 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid phosphoribosyltransferase # Organism: Corynebacterium glutamicum # 2 430 13 440 446 387 53.0 1e-107 MSTALFTDHYELTMVEAAMASGTANRRCVFELFPRRLPEGRRYGVVAGTGRVLDAVENFR FTDEDVSFLERTGVVGPHMAEWLSHYRFTGSIHGYAEGDLYFPGSPLLTVEGTFAEACVL ETALLSIYNHDSAIASAASRMVMMGEGRSIIEMGSRRTHEESAVAAARAAWIAGFGPTSN LAAGIRYGVPTSGTAAHAFTLLHDTEEEAFRAQLAAYGEKTTLLVDTYDIDNAVRTAIRL TEGRLGAVRIDSGDLSIVARQVRNLLDDLGAPNTRVIVTSDLDEWQIAALRGAPVDGFGV GTSLVTGSGAPTCSFVYKLVARATSDSPDAELLPVAKKSSHKNTVGGRKYAVRRIGSGGI ATAEVVGVGQPPAADADDRNLIVPLIVNGEVVGREPLETARKRHQAAIAELPISGRRISR GDQAIPTVMVKQGNDGADTVLGASLS >gi|302034468|gb|GL383167.1| GENE 234 233328 - 233615 251 95 aa, chain + ## HITS:1 COG:MT1373 KEGG:ns NR:ns ## COG: MT1373 COG2127 # Protein_GI_number: 15840786 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mycobacterium tuberculosis CDC1551 # 17 91 25 99 101 89 54.0 2e-18 MSVATAEPMTHRLVGQESTWTTVVWDDPVNLMDYVTMVFMRYFGYPRERATQLMIQVHNQ GRATVAEGSKEEMEVAVHAMHGYGLQASVEKGGQG >gi|302034468|gb|GL383167.1| GENE 235 233806 - 234171 311 121 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4729 NR:ns ## KEGG: HMPREF0675_4729 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 108 66 173 186 187 96.0 1e-46 MRRSILPSAYRDDDSADAQFHVDHDAEDVAARWEDAQSLSADVETLHRTGCISMNPEMTQ RWLRTVNALRGMMAARLGIIDQVTADEVARAAREELGAEEECVYEWLGLVVEVLVEVELS E >gi|302034468|gb|GL383167.1| GENE 236 234175 - 234717 272 180 aa, chain - ## HITS:1 COG:no KEGG:PPA1678 NR:ns ## KEGG: PPA1678 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 180 2 181 181 336 100.0 2e-91 MKLACHPSTAVHPETTTDPATLRWVVSGITLPFAGLLVSAPGLDEFLNQVRVEATVGAVM ATVLEGTWERIGAGFRTALTTALERTDEWVGGPDSKPLNEVETLRRCADELIGGPVGAVA AMHGGSIELVDVSVGDEERRVDVTMKGACRGCPAAIMTLHQRLERQLSLRLREPVTVREI >gi|302034468|gb|GL383167.1| GENE 237 234717 - 236681 1685 654 aa, chain - ## HITS:1 COG:XF0933 KEGG:ns NR:ns ## COG: XF0933 COG0370 # Protein_GI_number: 15837535 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+ transport system protein B # Organism: Xylella fastidiosa 9a5c # 23 633 7 594 617 408 41.0 1e-113 MPIPTAAPCHTVPTTEPRTGSPKLALVGSPNGGKTSIFNQLTGLHAKTGNYPGVTVSRST GVCRIGKNEYGIEDLPGTYSLAPISPDEEVVVHALEGTMKGIPAPDGVLVVADSTALRRS LLLLAETLALGLPTAVIVTMTDELRRRGGSLDTTALSQALGVPVVSVVANRGIGIGELRH LIADWQTWDRPPVPPPTATEELAGWVDSVLTSAGYQDPHLDSRTERIDKVLLHPVWGTIV FFVVMFLFFQALFTWAAPAQDAIDNFFSWLGGWVDDNVSNQILAGLLGDGIIGGVGSVLT FVPQILLMYLLLALLDAVGYMSRAAFLMDKVMSRAGLEGRAFVAMLSSFACAIPGVMATR TIPSAKDRIATMLGVPLATCSARLPVYVLLVGMLIPNTTQIGPFSGRGVAMFLLYLLGAV SAMAAAWVVKKITDRSGILLPFYMEMPPYRIPTLRSVGIAMWEPTKAFLHKAGTIIMLTT IVIWALTTFPMRSNAELAKAGIDPSNDVAVAAYTMDHSIAGSIGKAVEPVFEPLGFDWRI DVSLIGSLAAREVSVSTLGQMASATDPEDDVDVSHQLDHWTWTHGPNKGNKVFTPATIVA LILFFAYALQCMSTVAIMKRETGGWKWPAVAFGYMFVLAWVMAFIGRLVTGLLM >gi|302034468|gb|GL383167.1| GENE 238 236742 - 237071 197 109 aa, chain - ## HITS:1 COG:no KEGG:PPA1676 NR:ns ## KEGG: PPA1676 # Name: not_defined # Def: ferrous iron transport protein A # Organism: P.acnes # Pathway: not_defined # 1 109 1 109 109 202 100.0 4e-51 MTRHMNRSTADSQGVVPLSSLAAGQNATIEDITIECADYVRRRLHMLGFGHGRAVTKIRQ APFGGPMVFHVCDVQMCLRRAQADMIMVRPAPQTAPQPVVESCATTALA >gi|302034468|gb|GL383167.1| GENE 239 237243 - 238097 515 284 aa, chain + ## HITS:1 COG:MT1379 KEGG:ns NR:ns ## COG: MT1379 COG0796 # Protein_GI_number: 15840793 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glutamate racemase # Organism: Mycobacterium tuberculosis CDC1551 # 11 270 6 266 271 271 54.0 1e-72 MTEPDFDVVDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRRY ALQCLDRLVAHGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIG VICTEATARSLSYEDALAAVPGITLTTQACPKFVPFVEEGITSGPELEAIAREYLAPIQE AGCDTLILGCTHYPLLAGLISYVLGDGVTLISSSHQCARASYSLMVESGLLHSHPRESSR YFLTTGNAERFEKLGRRLMEGFVHDVQSVHADAHSLGDRAVVRD >gi|302034468|gb|GL383167.1| GENE 240 238137 - 238895 703 252 aa, chain + ## HITS:1 COG:Cgl2451 KEGG:ns NR:ns ## COG: Cgl2451 COG0689 # Protein_GI_number: 19553701 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RNase PH # Organism: Corynebacterium glutamicum # 10 250 18 258 258 277 63.0 1e-74 MWATILGKVSETSRIDGRRLDQLRDVRIERGWLSQAEGSVLVSFGRTTVLCNASVTEGVP RWRKGSGLGWVTAEYEMLPRATNERSGRESRKGKVGGRTHEISRLVGRSLRAVVDDKALG ENTIILDCDVLQADGGTRTASITGAYVALIDAVNWLRGRGGLVSEPIIGSVQAISVGVVD GIPMLDLAYEEDSRADTDMNVVMSGNGDFVEIQGTAEGTPFNRNLLNELLDLAAGGCATL KQAQSEALGVTL >gi|302034468|gb|GL383167.1| GENE 241 238892 - 239506 395 204 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|74313511|ref|YP_311930.1| putative deoxyribonucleotide triphosphate pyrophosphatase [Shigella sonnei Ss046] # 1 197 1 194 197 156 45 7e-37 MSRIVLASNNAKKLVELRRTFEGADTEVEIVGLSEVSDAPAPEETGRTFVENALIKARAA AHETGLPALADDSGLEVDALNRMPGIRSARWSGPHAHDERNLQLLLDQTFDLPDERRHGR FVCAMAFVDPDGTEITKVATMEGRIISEARGKNGFGYDPMFVPDAQPGDLTSAEMTPEVK DAISHRGQAVRAIVPAVVAHLEGR >gi|302034468|gb|GL383167.1| GENE 242 239507 - 240316 708 269 aa, chain + ## HITS:1 COG:NMA1963 KEGG:ns NR:ns ## COG: NMA1963 COG0207 # Protein_GI_number: 15794846 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate synthase # Organism: Neisseria meningitidis Z2491 # 1 269 1 264 264 360 62.0 2e-99 MQIYLDLLRRILDEGVRREDRTGTGTVSVFGHQMVFDLREGFPLVTTKKIYTRSVFGELL WFLRGDTNVGWLHDNNIHIWDEWADENGDLGPVYGHQWRSWPDDDGTIDQIANVVEQIRT NPWSRRHIVSAWNVAEIKEMALPPCHTLFQFYVTPDDRGTPTWLSCQLYQRSGDTFLGVP FNIASYALLTHLVASVTGLKPLRFVHTLGDAHVYLNHLDQVHEQLKRKPRHRPTLTVNPG IRDIDGFELSDITLTGYDPYPALPAPIAV >gi|302034468|gb|GL383167.1| GENE 243 240276 - 240830 488 184 aa, chain + ## HITS:1 COG:AGc3708 KEGG:ns NR:ns ## COG: AGc3708 COG0262 # Protein_GI_number: 15889333 # Func_class: H Coenzyme transport and metabolism # Function: Dihydrofolate reductase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 30 184 5 172 175 124 42.0 9e-29 MTRIRRCLLRLRSDRVPGSSFHQAAGGLMKVVAIAAVADNGVIGSGQDMLWHISEDFRRF KTVTMGHTLIFGRRTFEQIGKLPGRRHIICTRDPHWSHEGVDVATSPRQAVEMAREAGEE ICFVAGGGQIYADAFELCDELDITEVHQNPNGAARFPAIDPEVWVEVRRESRDGFDFVGY RRRS >gi|302034468|gb|GL383167.1| GENE 244 240860 - 242224 797 454 aa, chain + ## HITS:1 COG:Cgl2094 KEGG:ns NR:ns ## COG: Cgl2094 COG0389 # Protein_GI_number: 19553344 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Corynebacterium glutamicum # 1 440 10 448 467 226 40.0 9e-59 MDAFFASVEQRDKPSLVGKAVIVGGVGGRGVVATASYEARKIGVHSAMAGSQARRLAPNA AFLSGRFEAYRESSKVVMATLRELSPLVEPLSLDEAFVDLEAGDVDVENLDALQQVAVEL RARVAERTEGLSCSVGIGSSKFMAKVASEMAKPQRGHTDQIALIAPGTEADTIAPLSARA IPGVGPVTAERLEKLGLRTIADVRAARESELVHELGHASGASLVALSRARDDRPVVASRI AKSISVEDTFEHDLTHREECRQIVERHAGLVCGRLKKSGQFARTVTLKAKMADFTVWSRS VTLTGATDSPERISQLAVRMLDSLDLREGVRLLGVGVSNFATSAQEELFVVDDEGRLLDE PEVTEEITPIQPGPFGRRRSFDGRNWPPGVDLIHDEYGRGWVWGSGHGIVTCRFEYRGSE IGRVKSVPQDDEALHPAHPLPLAWQPPQEDVPSE >gi|302034468|gb|GL383167.1| GENE 245 242276 - 243964 1544 562 aa, chain - ## HITS:1 COG:PM1361 KEGG:ns NR:ns ## COG: PM1361 COG1073 # Protein_GI_number: 15603226 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Pasteurella multocida # 4 556 73 593 599 92 24.0 3e-18 MTPGFQRTKETQISYSLELARRGYVTLVVDPYNQGESTSQPPHSDDPSIQPAIDYVSRTN ALNYVDKTKIGITGHSAGGSQVRHIAAEYGTKEAKALKKAKAPDSPGGTTVTKEEREKAE QLNPIRSVFISGWLQQLNAKKLKNIRSNIGIGYALYDEGGYRNKTHNGDLRHAPEAIAVI NSGLPKSQHVNHVVVGKGYGSAADRTYRVAYNDRTIHPFQPLTPSAIGSMIQFFDDTIGA PHQMSTSNQTWWLKELFNGLSLVAALVMLVPLTKLLLTIPWFAAARTDISPAPPKPKGKS AVIFWTIFVISAAVACVTFIPLSVASQHIFSAAANKQNGWFFPGRMVNGVVLWSLVNGLF GLVLLWISHAISKKHGDDEAKDWGVRMNWVQTGRTLALALLVIVIFYTILAAIYGFFHVD YRLFVVAARPLTKRWFLIALAYVPALFLFFLSNSLRVNTSMRFNNQRRWVNWLIIALANS IGLAAIFVIQYVTLFSTGTVFWTTTWLYVNMLQSLLPMMVVLPLFNRAFYHVTGRVWLGP IVTTTIFALMALGGSVAYIPMF >gi|302034468|gb|GL383167.1| GENE 246 243961 - 244188 182 75 aa, chain - ## HITS:1 COG:no KEGG:PPA1669 NR:ns ## KEGG: PPA1669 # Name: not_defined # Def: membrane-spanning protein # Organism: P.acnes # Pathway: not_defined # 1 62 1 62 637 117 95.0 2e-25 MHSATGLRRSRPVIHVLICLLLILAGAVGASLIQTGGGHIAVQGLKIPGKDGAVASADSS DPTRQQQRTKPLSSS >gi|302034468|gb|GL383167.1| GENE 247 244561 - 245349 281 262 aa, chain + ## HITS:1 COG:mlr3078 KEGG:ns NR:ns ## COG: mlr3078 COG1737 # Protein_GI_number: 13472701 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Mesorhizobium loti # 30 261 24 254 275 78 26.0 1e-14 MAESKGSAPGSLYTRLGELQAMTPTDAIIAQYCEDSFPHVALENLDEISAATGTSTASVT RFVRKLGYASFRDFSRSLREEVAANFDLPSDRTTNDPMTDEPGAMWRSKMEAARRSIDIG LNSLDGETFDRVVELLRDDSRPLCLVAAATGHALLDYFRLLVRYYRRDVILLDSTDRMAH QLIDLPDNAILLASVFDRHSRMVESVLRLFHQRNMTTVLLTNRSSTPMRRYADHVLLVSS ESSTAFRSRACYLILLESLVAL >gi|302034468|gb|GL383167.1| GENE 248 245617 - 245844 85 75 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4715 NR:ns ## KEGG: HMPREF0675_4715 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 52 1 52 85 90 86.0 3e-17 MAFGSFDNQITHRGYVTKQMYQIWSERSTVQSWFDVEAAQTRVQSAIGHDPGRNRCPNHR PGQNHRHRVDDDIRQ