Prediction of potential genes in microbial genomes Time: Thu Jul 21 05:15:37 2011 Seq name: gi|302034504|gb|GL383247.1| Propionibacterium acnes HL025PA2 genomic scaffold Scfld0, whole genome shotgun sequence Length of sequence - 35700 bp Number of predicted genes - 42, with homology - 37 Number of transcription units - 27, operones - 12 average op.length - 2.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 51 - 905 905 ## HMPREF0675_5240 hypothetical protein 2 2 Op 1 . + CDS 1189 - 1500 186 ## COG5450 Transcription regulator of the Arc/MetJ class 3 2 Op 2 . + CDS 1478 - 2041 417 ## PPA2178 hypothetical protein 4 3 Tu 1 . - CDS 2072 - 3577 1275 ## COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain 5 4 Tu 1 . + CDS 3576 - 3791 118 ## 6 5 Tu 1 . - CDS 3730 - 4176 450 ## PPA2180 hypothetical protein - Prom 4218 - 4277 1.8 - TRNA 4412 - 4499 64.0 # Ser CGA 0 0 - Term 4497 - 4528 0.5 7 6 Tu 1 . - CDS 4619 - 5863 901 ## COG2244 Membrane protein involved in the export of O-antigen and teichoic acid 8 7 Op 1 . - CDS 5983 - 6465 308 ## COG0590 Cytosine/adenosine deaminases 9 7 Op 2 . - CDS 6469 - 7101 669 ## PPA2183 hypothetical protein 10 8 Op 1 . + CDS 7326 - 7952 621 ## COG0035 Uracil phosphoribosyltransferase 11 8 Op 2 . + CDS 7949 - 8692 404 ## COG3777 Uncharacterized conserved protein + Term 8941 - 8982 0.0 12 9 Tu 1 . - CDS 8729 - 9298 313 ## COG2606 Uncharacterized conserved protein 13 10 Op 1 . + CDS 9297 - 9443 125 ## HMPREF0675_5251 hypothetical protein 14 10 Op 2 . + CDS 9576 - 11531 1359 ## COG3158 K+ transporter + Term 11556 - 11600 11.4 15 11 Tu 1 . - CDS 11586 - 12299 449 ## COG0518 GMP synthase - Glutamine amidotransferase domain 16 12 Tu 1 . + CDS 12333 - 12599 193 ## PPA2189 hypothetical protein + Term 12652 - 12682 3.3 - TRNA 12681 - 12753 76.0 # Arg ACG 0 0 17 13 Tu 1 . + CDS 12727 - 12966 156 ## - TRNA 12984 - 13073 60.0 # Ser GCT 0 0 + Prom 13205 - 13264 2.0 18 14 Tu 1 . + CDS 13296 - 15149 1048 ## COG1316 Transcriptional regulator - Term 15004 - 15043 7.4 19 15 Op 1 . - CDS 15198 - 16169 582 ## COG1609 Transcriptional regulators 20 15 Op 2 . - CDS 16210 - 17445 1042 ## COG0153 Galactokinase 21 16 Op 1 . + CDS 17662 - 19371 1334 ## COG4146 Predicted symporter 22 16 Op 2 . + CDS 19382 - 19654 226 ## HMPREF0675_5264 hypothetical protein + Term 19796 - 19840 1.6 - Term 19691 - 19743 19.5 23 17 Tu 1 . - CDS 19758 - 20192 342 ## HMPREF0675_5265 hypothetical protein 24 18 Op 1 . + CDS 20140 - 20472 96 ## - TRNA 20318 - 20403 63.6 # Ser TGA 0 0 25 18 Op 2 . + CDS 20391 - 20621 155 ## 26 19 Op 1 . - CDS 20599 - 21513 380 ## PPA2198 hypothetical protein 27 19 Op 2 . - CDS 21501 - 22103 194 ## PPA2199 hypothetical protein 28 20 Op 1 . + CDS 22290 - 23291 966 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases 29 20 Op 2 . + CDS 23318 - 23488 79 ## gi|313831451|gb|EFS69165.1| hypothetical protein HMPREF9616_01008 30 20 Op 3 . + CDS 23499 - 24914 1484 ## COG0137 Argininosuccinate synthase + Term 24923 - 24971 12.1 31 21 Tu 1 . - CDS 24985 - 25212 180 ## gi|313765202|gb|EFS36566.1| hypothetical protein HMPREF9567_00841 - Prom 25346 - 25405 1.5 32 22 Tu 1 . + CDS 25369 - 26577 817 ## COG0477 Permeases of the major facilitator superfamily 33 23 Tu 1 . - CDS 26626 - 28803 1261 ## COG0025 NhaP-type Na+/H+ and K+/H+ antiporters - Prom 28897 - 28956 2.3 + Prom 29020 - 29079 2.2 34 24 Op 1 . + CDS 29134 - 29691 268 ## HMPREF0675_5273 transcription factor WhiB + Term 29704 - 29761 1.0 35 24 Op 2 . + CDS 29764 - 30519 726 ## COG0561 Predicted hydrolases of the HAD superfamily 36 25 Op 1 . + CDS 30645 - 30794 87 ## 37 25 Op 2 . + CDS 30888 - 31850 333 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 38 25 Op 3 . + CDS 31840 - 32574 637 ## PPA2207 putative ABC transporter-associated permease 39 25 Op 4 . + CDS 32565 - 32768 152 ## gi|289427917|ref|ZP_06429621.1| conserved hypothetical protein 40 26 Op 1 . + CDS 32904 - 33488 215 ## COG1396 Predicted transcriptional regulators 41 26 Op 2 . + CDS 33501 - 34241 435 ## COG3382 Uncharacterized conserved protein + Prom 34477 - 34536 2.2 42 27 Tu 1 . + CDS 34652 - 35699 713 ## HMPREF0675_5281 hypothetical protein Predicted protein(s) >gi|302034504|gb|GL383247.1| GENE 1 51 - 905 905 284 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5240 NR:ns ## KEGG: HMPREF0675_5240 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 14 284 1 271 271 450 100.0 1e-125 MRVRSNPLARGRYMDISAMDPKDIPGLFDAEVVGPDGEKVGTIQQIFADEVTGAATFVTV LSQGHEYFIPVRGAEYSTSQVNVPFSRNLIETAPEASEEDDLSRDREAEVYGHYGMEPAR RSGLEISDDDDIAIAHPGRGAVSESDIVEADVVDDSEPDADEAGQDTVVTPIVVSEAGSD AEDTDDDEENRPKVLSDDHGDEEAHTVDSAPAVGLPAGAKLRRYVVTDLVTVQIPVRREV VCWEDSEGNIHDFDKVEAPEEAKRAGVPGQATWWFNDGPEAPAG >gi|302034504|gb|GL383247.1| GENE 2 1189 - 1500 186 103 aa, chain + ## HITS:1 COG:MT2444 KEGG:ns NR:ns ## COG: MT2444 COG5450 # Protein_GI_number: 15841887 # Func_class: K Transcription # Function: Transcription regulator of the Arc/MetJ class # Organism: Mycobacterium tuberculosis CDC1551 # 1 98 1 98 105 125 60.0 2e-29 MIFKRVGDSRPYPSHGYTQKKWSQLAPVQVRLDQLVTTKSTLNLANLLEDDSTFYGDLFA HVVAWHGDLYLEDGLHRALRAALQQRQTLHARVLDLNGRHDFR >gi|302034504|gb|GL383247.1| GENE 3 1478 - 2041 417 187 aa, chain + ## HITS:1 COG:no KEGG:PPA2178 NR:ns ## KEGG: PPA2178 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 187 1 187 187 296 99.0 3e-79 MAVMTFDERRHYLRMAGTPLTLLALVLLIAVAIRAGWKAVSAPIPPPPLIPCVDQDVNGE LTTQDITVSVYNSGHTRGLAGSVSKQLTNVGFVIDSVSNRQPSVKKVTIIGQDAKNPEVG LVAGYFPGAVVKSDPKRVDHEVEVVLSDRDPNFKTTAPKSVKVNGSVCLPSPSPTPSILA SPGEQPS >gi|302034504|gb|GL383247.1| GENE 4 2072 - 3577 1275 501 aa, chain - ## HITS:1 COG:BH4038 KEGG:ns NR:ns ## COG: BH4038 COG3263 # Protein_GI_number: 15616600 # Func_class: P Inorganic ion transport and metabolism # Function: NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain # Organism: Bacillus halodurans # 5 478 6 483 490 295 39.0 1e-79 MQPADLALFLGAVVVLLAAFAARIGTRLGLPALLLFLLVGMLLGPIGFGINFNDLAGAHA IGFAALVLVLAEGGLSTNWKDIRPALAPAALLATVGVGVCFGVMTLLGHYVLGLHWSVAA LLGAATAPTDSAAVFSVLRGVSLPNHLKSVLEAESGLNDAPTVLVVIALTGVATGESNAG VLPLLGSIAVQLIGGILVGLLVGWVAGKVSRRITLPSGNLYAIAAMAWAVTAYGTGAWIG VSGFSAVYIAAVVIGNGDLPYQHTTRSFSEGIAWICQIGLFVMLGLLANPDRLTWGSVGV GIAAGLLLTLVARPVAVAACTIWFGFERNERLFMSWAGLRGAVPIILATIPMASNMDRAD KFFDVILVLVVVFTCIQAPTLPAAADILGVVDPQMAKDVSIEVAPLDEIAADLLQADVPK GSRLAGVTIRELRLPRNCVVSLIIRGDRSFTPHAGTVLEQGDELLIVVPQGKRRTVAERL IEISRGGRLARWHGLRVQTAD >gi|302034504|gb|GL383247.1| GENE 5 3576 - 3791 118 71 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTSIIATEQTGSSQLRTQISDRSQVMIGMAVPRCSDLTDQTSAGASIGVLGPKTGWWRAS VVAEPYQGWVR >gi|302034504|gb|GL383247.1| GENE 6 3730 - 4176 450 148 aa, chain - ## HITS:1 COG:no KEGG:PPA2180 NR:ns ## KEGG: PPA2180 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 148 67 214 214 249 99.0 2e-65 MALSQKFDNLLGILGAGAFFIGVVVFVMAPFLIVPAVFALVFPGCSLDSPWTWQTVIVGG LVLFALGIGVSLLMGVLARVIAPLGHLVVNKVTKESLEFLVLWWFYSTLMLPVSYAFGAS VVVTIVTAVTEPILDRALQRQKHATSQS >gi|302034504|gb|GL383247.1| GENE 7 4619 - 5863 901 414 aa, chain - ## HITS:1 COG:MA4450 KEGG:ns NR:ns ## COG: MA4450 COG2244 # Protein_GI_number: 20093236 # Func_class: R General function prediction only # Function: Membrane protein involved in the export of O-antigen and teichoic acid # Organism: Methanosarcina acetivorans str.C2A # 3 358 18 378 494 124 25.0 3e-28 MTKVISGTGLAQLIAALATLYVTHHIDPADWGIYGAIMAVSQFVIPAAALRYDMAIVLPR DDSEAKRVFRLATRINAIVSGVAMAAMVPLGPYLSGLLGKPQARWWLLAVGPITFTYAQV NVVNFWANRRKRFGVIGTNAVWCQSTTAAGRIGSCAVCLGAFGQVIATFLGKCLALNNFR RQLGSDLRGIKEAEVPLRTLMRKYRQLPLLTAPNVIVDAIRQQGVNMIIMVRFSTSGYGR FSIAWTLMQMPASVINQALSQVFFQKLSVSDAGRFYQTVKKSVVRSFLIGIVPFGLLYLL IPPVLPWLLGAKFHQSADIAVALVPWLFVNFVTSPISNMFIVTRNNGIALVFAIVYAAVP LTYLNLSHLSIVGTIYQMSFIMAGLLVFYIGLALVVAKRFDQKNVKLDGEVEAA >gi|302034504|gb|GL383247.1| GENE 8 5983 - 6465 308 160 aa, chain - ## HITS:1 COG:Cgl0229 KEGG:ns NR:ns ## COG: Cgl0229 COG0590 # Protein_GI_number: 19551479 # Func_class: F Nucleotide transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: Cytosine/adenosine deaminases # Organism: Corynebacterium glutamicum # 12 154 17 159 159 154 56.0 8e-38 MAGPVPGWRQAMTQALDVARRAATWGDVPIGAVILGANGEVLSEAGNERERTGDPTAHAE VLAIRRAAEARDGWRLGDCTLVVTLEPCTMCAGTIVAARIPRVVFGAFDPKAGAVSSLFD AMRDPRLPHRPKVVTGVMAEESSALLREFFDGHRACTVDG >gi|302034504|gb|GL383247.1| GENE 9 6469 - 7101 669 210 aa, chain - ## HITS:1 COG:no KEGG:PPA2183 NR:ns ## KEGG: PPA2183 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 210 34 243 243 251 100.0 2e-65 MSRFNDNEFVPDDDVDDYDDLDDYDELSDDDDYGDDGDDDYDDDDYDDDLEDASEDEIDF VVALYNDDGERVAVPMEPMLANDFDELITQLRRLPGDAGAVGMVSIDHQFYVIVRVRGRN VQVFLSDATQANDWPIARDVADFLGEDIPDPDDDPETMGDGDMLADAGLGEFDMEAFADA DEDSDEILSDIAARVHFGPQFERAANASAR >gi|302034504|gb|GL383247.1| GENE 10 7326 - 7952 621 208 aa, chain + ## HITS:1 COG:SP0745 KEGG:ns NR:ns ## COG: SP0745 COG0035 # Protein_GI_number: 15900640 # Func_class: F Nucleotide transport and metabolism # Function: Uracil phosphoribosyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 1 205 7 207 209 204 49.0 9e-53 MDHPLVSHKLTLLRSVDTPSPVFRQLVEELVTLMAYEGTREVRIEPTTVTTPLTATEGVA LTRPKPLVVPILRAGLGMLEGMMRLIPSAEVGFVGMARDEETLQPMTYAERLPKDLSGRQ CYVLDPMLATGGSLGGTVEFLVRRGADHITCLCILAAPEGIENFRKLVRDLDVPCHLIVA GLDDHLDEHGYIVPGLGDAGDRLYGLAE >gi|302034504|gb|GL383247.1| GENE 11 7949 - 8692 404 247 aa, chain + ## HITS:1 COG:PA0878 KEGG:ns NR:ns ## COG: PA0878 COG3777 # Protein_GI_number: 15596075 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Pseudomonas aeruginosa # 9 225 25 247 275 112 35.0 7e-25 MTILRPADLRGLAALLGSQEPRAVVPPCWHWVLLLDPVVPGNLDEDGYVIGSPITPEPGM MRMFAGGRVRTISPLALNSETSRTTKVASITDKEGRRGLLHFVTMRSTWSQGGRECLVDE QDYVFMPTRSAGPSPEGAGYTGSNGFLVTEPLLVTFSALTANPYRIHWDRDFCRRAGHDG LVIHGPLKALLMAQAFADTGADFTGKRFSYRFRAAVTAPTRLTVGIEEDEAKVRRPDGTV TATATLG >gi|302034504|gb|GL383247.1| GENE 12 8729 - 9298 313 189 aa, chain - ## HITS:1 COG:PA2301 KEGG:ns NR:ns ## COG: PA2301 COG2606 # Protein_GI_number: 15597497 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Pseudomonas aeruginosa # 13 188 7 177 180 100 39.0 2e-21 MRDGLVDGSTVATVGHMYDSVEHLPAADHPELLAATVAGRVAELPSAVVFSIDPEIADTE ALCEAFGEGPETCANCVIVRGKRGDIEKYVACLVLATTRVDVNKVVRKKLDVRKASFAPI DEAVGMSGMEYGGITPVGLPAEWPIWIDPRVAEAEAVCIGSGLRSSKLIVSGGDVLSLPG AEVVAGLAN >gi|302034504|gb|GL383247.1| GENE 13 9297 - 9443 125 48 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5251 NR:ns ## KEGG: HMPREF0675_5251 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 48 1 48 48 78 100.0 8e-14 MPLMEFAGDYSWGYDPAHIFAVESAYGGHPASATLVLPPYSAIITSRA >gi|302034504|gb|GL383247.1| GENE 14 9576 - 11531 1359 651 aa, chain + ## HITS:1 COG:Cgl0692 KEGG:ns NR:ns ## COG: Cgl0692 COG3158 # Protein_GI_number: 19551942 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transporter # Organism: Corynebacterium glutamicum # 24 651 16 628 628 525 46.0 1e-149 MIRSHERQAVAKATQPIVDREPIRSMKPGLALAALGIVFGDIGTSVLYSLQTVFSMENHA VRPTHGDVMGIISMIFWSILLVVCVKYVIFVMRADNDGEGGILALMALVRRLMASHKGTG MTALLLGIVGAGLFYGDSFITPAISVMSAVEGLTVANPDAEKIVLPASVVILTLLFIVQR RGTEVIGKAFGPVMATWFLTLAALGIPWIIHHPVIITALSPHWAILFSIERPAMAFIAMG AVVLTITGAEALYADMGHVGAPSIRLAWFGLVLPCLLINYLGQGAMILSHPDWIDNPFFR MAPDWATIPLVTIATMATVIASQAVISGAFSMSSEAARLGLLPRLGVRHTSKSEGGQIYI PEVNWTLFIGVLALILIFQTSSKLATAYGLAVTGTFLLTTSLFLVLAHRAWHWPMWALIF FGVIVGGVELSIFSANLLKIASGGWIPLLFATIVVIIMTTWRRGTAYIAKQRQDDEGPLD DFLNWMHETKPTRVPGLAVYPHPGRATTPLALLNNLRFNHVLHEHNIIISIVVENVPHVR HVNRIEKVDLGRPTDGITYIACHVGFTDSQDVPKALALAAAKCPWLKDHLDEAIYYLSLV DVKRDEPQQGAHMAGWRKMLYITMSRNQADRTRVFRIPRTRAVVMGEAVAL >gi|302034504|gb|GL383247.1| GENE 15 11586 - 12299 449 237 aa, chain - ## HITS:1 COG:AGc389 KEGG:ns NR:ns ## COG: AGc389 COG0518 # Protein_GI_number: 15887581 # Func_class: F Nucleotide transport and metabolism # Function: GMP synthase - Glutamine amidotransferase domain # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 186 22 209 254 97 35.0 2e-20 MTRILVIVHEPSCSSGRLGQLWRNAGADVAEINAWNHPVPPIVDADALVVLGGSMSCQDD AEAPWLAPTRQLISRTVRAGTPFLGICLGHQLATVALGGQVCTSDHFCLGAAEMHLTPEG KKDPLLSVYDGHRGIHFNNDVAVVLPEDAVLLARDPTGQIEAVRFAERAWGVQFHPECTP EIFDAWTIGHGEKEWQQRLPWSEAVTVAETVRRDIDTVNAEEAFAARFQELIDPEKR >gi|302034504|gb|GL383247.1| GENE 16 12333 - 12599 193 88 aa, chain + ## HITS:1 COG:no KEGG:PPA2189 NR:ns ## KEGG: PPA2189 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 88 21 108 108 162 100.0 5e-39 MPELLQPEYRFRPTGRQLLLLSDGQVVLLSIFAHDLPLLAITVPIIVFAFALLSILRSDR LTGAGKVIWIVVCFPLVGPIVWFIAGKS >gi|302034504|gb|GL383247.1| GENE 17 12727 - 12966 156 79 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLYPLSHGRIVLCTLLNVTAFNSVMQIRVIQSPEIRLTSGFAEHQMRDTRPPRGIVDPNS RTFIRGTTSPTMHKARRPL >gi|302034504|gb|GL383247.1| GENE 18 13296 - 15149 1048 617 aa, chain + ## HITS:1 COG:lin2662 KEGG:ns NR:ns ## COG: lin2662 COG1316 # Protein_GI_number: 16801723 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Listeria innocua # 213 500 25 273 349 67 23.0 1e-10 MADASRGANSPSPRHAAQPDWMNDPEANEDTHVLRRADLRAAARPPTRSPRPRRSAAEPP VNAPQPLNEPKSRPSPARRAATAKASPASRSRRRPSRWNEEARRNHAFNTCLGWTILGAI VPGLTLSRSRAPRRRVTGLTIIGLLLIGLTIAVFFILANPTVAASIVVRPKLLTALTWGL PSLAVALVALLTFSHLDLRPQGITRGQRWVSTILVTALCTTIATPLAVAGRYAYDQDHML GRIFTDKRSGTRPSINYNQDVKAIWAAKPRVNVLLVGADDSKVRNYRAENSMNTDTIMVA SINTSNGDTSIFQIPRNTARMPFPSDSPLHRDFPNGFVGKDGDGNNPDYMANEIWSTVKA RYVDRMGATDYPGADALKLATGEALGLKIDYFVMLDIDGLQKLIDALGGVSVNINERLPI AGNTEGKRPDGYLEIGANQHLDGYHAMWYARSRSASTDYDRMGRQSCLIKAVLDQTSPQT VLTRFESIADASGQMVVSDIPQGMLPAFVDLAINMRDANINRVVFTNGKHGFFSSHPDYD LIRKQVEAAIHGVSASKNKNKPVTGASSANTHKTAMAPPSHSGLKKSPQTPAPRPSPDNH DVSQSVTDACAYNPQQP >gi|302034504|gb|GL383247.1| GENE 19 15198 - 16169 582 323 aa, chain - ## HITS:1 COG:CC0969 KEGG:ns NR:ns ## COG: CC0969 COG1609 # Protein_GI_number: 16125221 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Caulobacter vibrioides # 1 322 4 338 347 141 33.0 2e-33 MGDVAAAAGVSQQTVSRVVNNSDAVRKKTVDKVLKAMTEVGYSPNVAARSLRSGRTSAIG VLATDLSRTGELRTVQAIVDATRRSELAVVLDRLEPADDSVRSYRHAMKRMAGRVDGFII EGLELDHPEDLEVPPGIPVVMAGSPCSRFSTVGCDQASGVRTAVNYLLALGHRTVHLVSG PDYSRQAVVRRQAWQECLETNDREIPDVIIGDWTASSGRDAARYLKDAGATAVLASNDEM AAGAVIGLLDMGVRIPDDMSVVGFDDVLGNTVWPTMTTVRQDFAAVGQRLAEELLAQLQG APRKSVMVPAPLVIRESTAPPRH >gi|302034504|gb|GL383247.1| GENE 20 16210 - 17445 1042 411 aa, chain - ## HITS:1 COG:STM0774 KEGG:ns NR:ns ## COG: STM0774 COG0153 # Protein_GI_number: 16764138 # Func_class: G Carbohydrate transport and metabolism # Function: Galactokinase # Organism: Salmonella typhimurium LT2 # 29 407 6 379 382 218 37.0 1e-56 MSQTPHAIAADHQTPTIGTAWSVEEGATRARHLFGGHIGGSPDGVWAAPGRVNIIGEHTD YNNGFCLPIALPHRIYVAARRRDDDKVILVSQLDDSVLTWEGTLDEIAPGSVAGWKAYTG GVAWALRQAGHGLGGFEAALVTCVPLGAGLSSSAAVECGVGLALADLYDLDLTDSDSGRI GLVNAARAAENEVAEAPTGGLDQTASLRTTEGHALLIDCDDWSVRQVPFNLATADLELLV IDTCAPHRLVDGQYEARRRACENAARILGVGSLRDVGDLGAAVAALDDEGMASRVRHVVT ENDRVTQFVKLLDTGQIREVGPLMNASHDSLRDDYEVTCPELDTAVDAARAAGALGARMT GGGFGGCAIALVDRDVRNKVATQVADSFREAGFAHPEFYVVTPGPAALRVQ >gi|302034504|gb|GL383247.1| GENE 21 17662 - 19371 1334 569 aa, chain + ## HITS:1 COG:yidK KEGG:ns NR:ns ## COG: yidK COG4146 # Protein_GI_number: 16131549 # Func_class: R General function prediction only # Function: Predicted symporter # Organism: Escherichia coli K12 # 41 477 35 450 571 108 23.0 4e-23 MPLETLINAGFVDYLILLIYFVFVLGIGLAARHQVSDSLDFFLSGRSLPGWVTGLAFVSA NLGAVEIMGMSANGAQIGIPTVHYFWIGAIPAMVFLGIVMMPFYYGSGVRSVPEFMLKRF GPAAHLVNAISFALAQLLIAGINLYLLGTIVHALLGWPLWVALIVAAMIVLAYISLGGLS AAIYNEVLQFFVIVASLLPLVIIGLHRVGGWSGLKAKITAAAEAHPDVVTPAAQQLHSWP GQALSGFGSPVMSVIGITLGLGFVLSFGYWTTNFVEVQRAMASDSLSSARKTPIIGAFPK MLVPFLTVLPGMLAAVLVPEIARMKAGEKVAGGASGSFVQYNDSVLFLIRNLLPTGLTGV AITGLLAAFMAGMAANISAFNTVFSVDIWQHYVIKDKPDGYYVKVGRIATVIATVVAIGT AFMASGFSNIMDYLQTLFGFFNAPLFATFILGMFWKRSTPHAGWSGLVVGTLSAVTVWVM SLAGVFTLPGQGTAFLAATVGFVADIIVSIVVSLFTEPKPAAELVRLVYSETPKEHLVDP LEKDLPWYRRTVPLGMTVLAITVVLNIIF >gi|302034504|gb|GL383247.1| GENE 22 19382 - 19654 226 90 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5264 NR:ns ## KEGG: HMPREF0675_5264 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 90 1 90 90 149 100.0 4e-35 MSNGTATARRNRSKVARAMDIRTVIGVLLGLYGIILTITGLVKGSDAHADLVSGMCLLVA GAVFLVWVRLRPVKVPEVAEEASESAAGRG >gi|302034504|gb|GL383247.1| GENE 23 19758 - 20192 342 144 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5265 NR:ns ## KEGG: HMPREF0675_5265 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 144 18 161 161 281 100.0 7e-75 MSPEPPIRGFIIAGVLSIVGAVLMIISIAKSWHEVVTIIFIAVLACGIALAVTAAWSMVH MKLYVDLDDKGYHIHGAGQDRRGTWDKVTKAALTESRSRLTLYHGQVGRTHIVRPGIGDP KEMDDLAVDVAHRLDESRGYRQNI >gi|302034504|gb|GL383247.1| GENE 24 20140 - 20472 96 110 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDKTPAMMKPRIGGSGDMTCLVVPGGRSVTSILGIPISHHCKADMREPGPRVPHLGTGSV AARVGFEPTEVALGRFQGGCTRPLCDPANRARPGGPILAIIHRAYSSSRT >gi|302034504|gb|GL383247.1| GENE 25 20391 - 20621 155 76 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRSRQPGTTRWPHLSHNSSGIFIVPDLDPLIPRLDVDESERGHRPVTLISDPWTTAITRF ALSRQHLSAITVFRVV >gi|302034504|gb|GL383247.1| GENE 26 20599 - 21513 380 304 aa, chain - ## HITS:1 COG:no KEGG:PPA2198 NR:ns ## KEGG: PPA2198 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 304 1 304 304 542 99.0 1e-153 MSSMKGLSLVLATSFMLSFSPGSSFASGGVSVDPDSHTVYVRFSDKGSHHKSGIKIREGA KRGTPGHGGSHHKQSNPHAGKRQPPTSPKLSKSVDRRESDAYIASSILSLASPRIPYLLG LNLSLMEPKPNRTTLSPSPVRPKVSTREEARDWSVDLATNIHLAKPVVYVEPRPSANKWN ITAVGQPLWFHNPGSERHTSSDSSRGIIVSLDATRVETIYSTGEKTVRCAHSTPRPKNAD PRAQSPDCGYIYQHPGNYTVRMTEVWQVRWRSGDQSGQIVTRRSSSKPLKVNELIGVLTQ PGRR >gi|302034504|gb|GL383247.1| GENE 27 21501 - 22103 194 200 aa, chain - ## HITS:1 COG:no KEGG:PPA2199 NR:ns ## KEGG: PPA2199 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 200 2 201 201 361 100.0 9e-99 MALVMVGLGTAACGADEDSTGATGGITPVASVAPAQSPTLTPSAEAPKFVKVTATPAPGT KQDALFLEAKKVYETYLEQIYKLEVGDGVNSVSAELQGILSEDGTEAIRKAYSEAKSRGH RVLPVKTPFSSVTVNRVSKGDDSEIAIIGCADISNWRFVNPKDGTLTPGRMRKDELSMRR IGDSLKIVEAESAEVASCRV >gi|302034504|gb|GL383247.1| GENE 28 22290 - 23291 966 333 aa, chain + ## HITS:1 COG:Rv3777 KEGG:ns NR:ns ## COG: Rv3777 COG0604 # Protein_GI_number: 15610913 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Mycobacterium tuberculosis H37Rv # 27 333 17 328 328 283 51.0 4e-76 MHVITVRPTDKTDSKGRHRPGPECIEWTEVPTPKPGPGEVLVKVKAAGINRGDLLQRQGL YPPPKGVSETMGLEVTGVISSLGQDVTGWSEDDEVIALLAGGGYAEYVIVPAGQLLPIPE GIDPVTASTLIEVTATVISNMDHVGLARGETFLVHGGAGGIGQFAIQYAKSLECTVITTC GTAEKQEFCRTLGADVALDYHEDWVAGVKDATGGRGADVILDVMGAKYLDLNVDALAIGG RLDIIGMQGGIKGELNIAKLLNKRALVTATSLRPRPLEEKAKICQRVREVAWPLYTNGSI KPAPVESFPMSEAGRAHERLESGEVLGKVALTL >gi|302034504|gb|GL383247.1| GENE 29 23318 - 23488 79 56 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313831451|gb|EFS69165.1| ## NR: gi|313831451|gb|EFS69165.1| hypothetical protein HMPREF9616_01008 [Propionibacterium acnes HL007PA1] hypothetical protein HMPREF9564_00607 [Propionibacterium acnes HL053PA1] hypothetical protein HMPREF9566_00015 [Propionibacterium acnes HL045PA1] hypothetical protein HMPREF9595_02605 [Propionibacterium acnes HL005PA2] hypothetical protein HMPREF9583_02060 [Propionibacterium acnes HL038PA1] hypothetical protein HMPREF9570_00229 [Propionibacterium acnes HL043PA1] hypothetical protein HMPREF9571_00049 [Propionibacterium acnes HL043PA2] hypothetical protein HMPREF9343_00383 [Propionibacterium acnes HL099PA1] # 1 56 1 56 56 102 100.0 1e-20 MAGPWQVVLCSRRSPDSFPVQLFASRPPADSPYLIISINFQLSQPHIHLGRCIYMR >gi|302034504|gb|GL383247.1| GENE 30 23499 - 24914 1484 471 aa, chain + ## HITS:1 COG:NMA0303 KEGG:ns NR:ns ## COG: NMA0303 COG0137 # Protein_GI_number: 15793316 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate synthase # Organism: Neisseria meningitidis Z2491 # 4 430 7 433 447 604 67.0 1e-172 MSKVITQLPVGERVGIAFSGGLDTSVAVAWMRENGAVPCTYTADIGQYDEPDIASVPGRA LDYGAEISRLVDCKAALVEEGLSAIACGAFNVRSAGRPYFNTTPIGRAVTGTLLVRAMHT DDVSIWGDGSTYKGNDIERFYRYGLLANPQLRIYKPWLDENFVAELGGRDEMSAWLTAHN LPYRDSKEKAYSTDVNIWGATHEAKKLESLHVSIESVNPIMGVKFWDPDVKIDTEEVTVS FEQGLPVAINGKEYDDKVALVLEANAIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALL HIAYERLANAIHNEDTLETYHNEGRRLGRLLYEGRWLDPQSLMIRESLTHWVASAITGSV TLKLRRGWDYSILDTTGPNFSYHSEKLSMERVEGAAFGPTDRIGQLTMRNLDIADTREKL ELYSAQGQLASHADLVGQLETGGASAIASNGDDDDDSQKTLDAAAMEVGVN >gi|302034504|gb|GL383247.1| GENE 31 24985 - 25212 180 75 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313765202|gb|EFS36566.1| ## NR: gi|313765202|gb|EFS36566.1| hypothetical protein HMPREF9567_00841 [Propionibacterium acnes HL013PA1] hypothetical protein HMPREF9574_02080 [Propionibacterium acnes HL074PA1] hypothetical protein HMPREF9580_00265 [Propionibacterium acnes HL087PA2] hypothetical protein HMPREF9585_01511 [Propionibacterium acnes HL083PA1] hypothetical protein HMPREF9587_02277 [Propionibacterium acnes HL025PA1] hypothetical protein HMPREF9589_00032 [Propionibacterium acnes HL059PA1] hypothetical protein HMPREF9593_00660 [Propionibacterium acnes HL046PA2] hypothetical protein HMPREF9604_01114 [Propionibacterium acnes HL036PA1] hypothetical protein HMPREF9605_01011 [Propionibacterium acnes HL036PA2] hypothetical protein HMPREF9611_00368 [Propionibacterium acnes HL063PA1] hypothetical protein HMPREF9616_01006 [Propionibacterium acnes HL007PA1] hypothetical protein HMPREF9617_00919 [Propionibacterium acnes HL056PA1] hypothetical protein HMPREF9597_00031 [Propionibacterium acnes HL005PA4] hypothetical protein HMPREF9598_00418 [Propionibacterium acnes HL050PA1] hypothetical protein HMPREF9600_00875 [Propionibacterium acnes HL050PA3] hypothetical protein HMPREF9606_01006 [Propionibacterium acnes HL036PA3] hypothetical protein HMPREF9608_01182 [Propionibacterium acnes HL067PA1] hypothetical protein HMPREF9609_00757 [Propionibacterium acnes HL027PA1] hypothetical protein HMPREF9613_01054 [Propionibacterium acnes HL002PA1] hypothetical protein HMPREF9614_01335 [Propionibacterium acnes HL002PA2] hypothetical protein HMPREF9620_01143 [Propionibacterium acnes HL037PA1] hypothetical protein HMPREF9564_00609 [Propionibacterium acnes HL053PA1] hypothetical protein HMPREF9566_00013 [Propionibacterium acnes HL045PA1] hypothetical protein HMPREF9573_01601 [Propionibacterium acnes HL072PA2] hypothetical protein HMPREF9594_01408 [Propionibacterium acnes HL005PA1] hypothetical protein HMPREF9595_02603 [Propionibacterium acnes HL005PA2] hypothetical protein HMPREF9596_01786 [Propionibacterium acnes HL005PA3] hypothetical protein HMPREF9569_01057 [Propionibacterium acnes HL078PA1] hypothetical protein HMPREF9610_00099 [Propionibacterium acnes HL027PA2] hypothetical protein HMPREF9615_00079 [Propionibacterium acnes HL002PA3] hypothetical protein HMPREF9572_02512 [Propionibacterium acnes HL072PA1] hypothetical protein HMPREF9583_02058 [Propionibacterium acnes HL038PA1] hypothetical protein HMPREF9590_01769 [Propionibacterium acnes HL059PA2] hypothetical protein HMPREF9592_00078 [Propionibacterium acnes HL046PA1] hypothetical protein HMPREF9601_01137 [Propionibacterium acnes HL030PA1] hypothetical protein HMPREF9337_02369 [Propionibacterium acnes HL096PA3] hypothetical protein HMPREF9338_00219 [Propionibacterium acnes HL096PA2] hypothetical protein HMPREF9570_00231 [Propionibacterium acnes HL043PA1] hypothetical protein HMPREF9568_00031 [Propionibacterium acnes HL013PA2] hypothetical protein HMPREF9571_00047 [Propionibacterium acnes HL043PA2] hypothetical protein HMPREF9581_00258 [Propionibacterium acnes HL087PA3] hypothetical protein HMPREF9586_00514 [Propionibacterium acnes HL083PA2] hypothetical protein HMPREF9579_00370 [Propionibacterium acnes HL087PA1] hypothetical protein HMPREF9563_00783 [Propionibacterium acnes HL020PA1] hypothetical protein HMPREF9588_00033 [Propionibacterium acnes HL025PA2] hypothetical protein HMPREF9343_00385 [Propionibacterium acnes HL099PA1] # 1 75 15 89 89 120 100.0 3e-26 MTNSVCILVMAMKRNDGIQPKMIAMVATGVLPLSSDANEAMLKAAHKMTAKIMDRAGRRR VITRSGSALRDESPF >gi|302034504|gb|GL383247.1| GENE 32 25369 - 26577 817 402 aa, chain + ## HITS:1 COG:mll7465 KEGG:ns NR:ns ## COG: mll7465 COG0477 # Protein_GI_number: 13476206 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Mesorhizobium loti # 22 396 23 389 407 72 23.0 2e-12 MHGYRDVIAIREVWTTLLLAALIRIPIFSLGIVMSVHVVSSLHLDYVRAGAVTTVVTVAT MISGPWRGSMVDRRGLRRTMLPSLITTTIAWGLCPWLGYFPLLVLCAIGGLWNYPIFTIP RQVLMAAVPASRRRAALSLDSVTVEICYMIGPTVAIIAATTIGTRITITACGFVAAIGAI GLMVLNPATTEPSEDSPARPATPASAAPIVPAPHSRKMAWLSPRSASILFAVVATGFCLG GLELTAVAEMRSMGHPEMIGWVLAASGFGSAIGGTLYGALPRGASTALLLVFLGTLTALP ALSRGPASTAILLFVGGVFCAPTITSSIDALTDLVPADSRGTIIGWQGSCLNGGTALAAP LIGAIMDATGWQWGFLVAGIAGAVIGATVWTAKRVVRKRQAV >gi|302034504|gb|GL383247.1| GENE 33 26626 - 28803 1261 725 aa, chain - ## HITS:1 COG:PA3739_1 KEGG:ns NR:ns ## COG: PA3739_1 COG0025 # Protein_GI_number: 15598934 # Func_class: P Inorganic ion transport and metabolism # Function: NhaP-type Na+/H+ and K+/H+ antiporters # Organism: Pseudomonas aeruginosa # 14 432 17 408 417 260 39.0 7e-69 MDAATYMALVLVLAVGAQWLGWRLRLPALLFLLVIGFALGQWVTPDEIFGRKLLFDGVNL SVAIILFEGSLGLKLREVRDLGRPIFQLCTVTAGLAWVLITGAAMALGFDGRVSLLLGAI LIVTGPTVINPILRQLRPTRRVSALLRWEGIVVDPLGAILALLVYQAITSIDGSSIGQGV LNLGLTLLVGLLFAGPIGWIVTAMMRRHLIPDFLQGVIFVGVAVGTCVGANVIREESGLV AVTMLGIYLANQRNLELEPVIEFKEHLQVLLVGVLFIMLAGRVTPSQILDILSAGLIFVA LLVLVIRPASVLLGLVGTETTRQERTLMSFMAPRGIVAASVASIFAMQFSESADHVREQA KQIAASDPEHSKRLFSFANQIAGMASQVDRLVPLVFLVIVCTVAIYGLGIGRLAEKLGLA SASPRGVMFAGSPAWTIDTAKTLRDFDVPTLIVTRRAYDLYAVRKAGLRCEAADFLSEYA TEDMDLAGIASMVACTPDDDTNSIASVHYRRALGRANVFQLERMDERDDGDATTGTAQIL KARTAFDPPTSHSAMDKMWRNGKRVRRVKLDENRNWEMFREAMPDAVVMFVVKPSSVNVA TNGMSAPKEDDTIIYLGDEWKDAPEPVAAQEEQPRRQTMSVPSSEEAVRDRIDADRRAAE GKNKAAASATAGDPADTTVDHGDKGEKPEQTSEASGGVEDPVRPRFDELSPGRPSPVSAD SPSEW >gi|302034504|gb|GL383247.1| GENE 34 29134 - 29691 268 185 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5273 NR:ns ## KEGG: HMPREF0675_5273 # Name: whiB_3 # Def: transcription factor WhiB # Organism: P.acnes_SK137 # Pathway: not_defined # 1 185 4 188 188 317 100.0 1e-85 MNDRTLPSCANLRAVFQHPLLEGDSTAATPDDQQLERTLQARARAACSTCPLFEQCLENA ILDHDVAGFAAGTTPRQRSRIRSYLGVKVRPDDLESFAGIIGRGHQVATQDVMRLRRAHP DQPLSFIADRLGCSLSTVKRHLRRARDTSLAPRRERSSRVTATRLAAAYESVTGRPHPGR ATLAA >gi|302034504|gb|GL383247.1| GENE 35 29764 - 30519 726 251 aa, chain + ## HITS:1 COG:SP0923 KEGG:ns NR:ns ## COG: SP0923 COG0561 # Protein_GI_number: 15900803 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Streptococcus pneumoniae TIGR4 # 1 250 4 267 269 99 31.0 6e-21 MVALDIDGTLVNHQGELPHAVREAVAKIDVPVVLATGRGLFGAVPIHEALGLQGGHAVVS NGAVTATMSPLKVQTEITFDPRPIIDHVMDVYPQALIAVEEVGVGYRLNQLFPVGELQGE LHIESIEKLASRPAPRVIIRDPNGYADSFQDLAHSLDLHSVSYVIGWSAWLDITPEGVTK ASALDALCRLKGIDPKDVLAIGDGNNDIEMLQWAGRGVAIGDASEQVQAAADDIAPCFED GGTAVELGRWF >gi|302034504|gb|GL383247.1| GENE 36 30645 - 30794 87 49 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDLQELASELNNFDTETFEVKDYIDYAEMAFGSTCSSSSCTSTCSSTSS >gi|302034504|gb|GL383247.1| GENE 37 30888 - 31850 333 320 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 19 317 1 305 311 132 30 2e-30 MVWGAHLVPHPQVQRDQHMVDHVVDVHDITVTIKGRTILSNLSIQVEEGTFHGIIGPNGA GKTTLFNAIQGFRKPAQGSIELLGHSPYPRNLDLLTQIGIQPQRPAFFPHTTLREHLCAV ADIYAVAASRVDDLIEALGLSHASRTRVEKLSGGERQRLAVATALVHRPAVLFLDEPTAG LDPEARAGLVSLLQSTDLLHMTTLYTTHHLDEAERLCDTVSIIENGRIIVSESPSTLIRE ADLGATVLLPNALHQADDIAALAGQSNVRVTRDGVSIRTHDTAGLFATLSNHHINTRGAQ VHEGHLENVYLQLTGKDHVD >gi|302034504|gb|GL383247.1| GENE 38 31840 - 32574 637 244 aa, chain + ## HITS:1 COG:no KEGG:PPA2207 NR:ns ## KEGG: PPA2207 # Name: not_defined # Def: putative ABC transporter-associated permease # Organism: P.acnes # Pathway: not_defined # 1 244 52 295 295 401 99.0 1e-110 MSTKSRALTRVLLRDDLRDWSTLIFTFIFPSVLLVVLILTIADRVPGMDLTGEISSNVIA FGASFVGIFSGASHLAIWRENGMFTVMRTFPLSSRTVLTCQARSGVVMLITQAALLVVVA VSMGMRLKVTALAAVIPLALGYLLFFTLGVLLGILLPTMAGVSMAANVIILGLGFLGGAI MPVTLLPHWAQIVAPWTPIYHLREAATMPLIGVGTWIKAGTGMAYLLGVTALLAIVSERT MRWE >gi|302034504|gb|GL383247.1| GENE 39 32565 - 32768 152 67 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|289427917|ref|ZP_06429621.1| ## NR: gi|289427917|ref|ZP_06429621.1| conserved hypothetical protein [Propionibacterium acnes J165] conserved hypothetical protein [Propionibacterium acnes J165] # 1 67 1 67 67 131 97.0 2e-29 MGMSNVVSMAIPSGFLVCIGTKDERILSSDELRQRWMRTRPDLHSVSYITGLFDEGGTAN ELNRWFA >gi|302034504|gb|GL383247.1| GENE 40 32904 - 33488 215 194 aa, chain + ## HITS:1 COG:STM1664 KEGG:ns NR:ns ## COG: STM1664 COG1396 # Protein_GI_number: 16765008 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Salmonella typhimurium LT2 # 11 187 21 197 200 126 37.0 2e-29 MDTGAEPLAHAIGARVKQQRMTRRWTLDQLASYAGVSRRVLVNVEQGAVNPRVGTLLRLS DALGVGLPALVEPPASRTPKLTRNGQGAALWTGEAGGKGMLVAGTEPPDVVELWDWTLAP GERHDSEAHSDGTRELLHVQEGTVIVEVDGNRYDLAPGDALSFYGDAAHAYINSTDNSAR FSLTVFEPDVGTAH >gi|302034504|gb|GL383247.1| GENE 41 33501 - 34241 435 246 aa, chain + ## HITS:1 COG:PA4181 KEGG:ns NR:ns ## COG: PA4181 COG3382 # Protein_GI_number: 15599376 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Pseudomonas aeruginosa # 20 239 15 229 239 163 44.0 3e-40 MPEPMTPETFLDACTVDEAVFELRPDYRALLLVVDGLTPPASGEGNNMVDTLIAQAEAHA RNLLADSPVNELAHIASWREAFRGFGAKPQRTRNCLEALTRRAEKGLPRVNALTDVYNAI SVLHQIPLGGEDLHRYNGPARLIRATGQESFDTTANGEAMIEHPEIGEVIWCDDAGVTCR RWNWRQGRRTGLTDTTRTALFILDALAPVTDEELHATSDALIEALANLGENVQTTTRLIG AQPSGN >gi|302034504|gb|GL383247.1| GENE 42 34652 - 35699 713 349 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5281 NR:ns ## KEGG: HMPREF0675_5281 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 322 1 322 426 420 100.0 1e-116 MRRTRITVAAVTATALIGSLSAITPLPANAASNGNSSITQSAAFSPRATTKISEDCRKAI INDLKLRGAIVGALVKAGLSAADAAALAPRIAAEMAAEGTLTINHHRLKVLVASQLGLVA DAAVQHAAAAIDLSFKAILGASIIPNALGSAAFKNAVIANLVAAGIDKHLARATAVAIVA TALNPALGPIAKFELIKAEIAAQAALLIRRGVHLQKAAIEHVIGRAFDAAVATAIISSPI LSARIVTHLVRAGIDKSIAISLAPHIVKRLAKEPLLAFNTAKLVKDIARQIVDIRNTQEA IAVYKQLKAELPTLDGLVQKACTPEPTPTPTPAPTPTPTPTPTPAPTPT Prediction of potential genes in microbial genomes Time: Thu Jul 21 05:17:23 2011 Seq name: gi|302034503|gb|GL383248.1| Propionibacterium acnes HL025PA2 genomic scaffold Scfld1, whole genome shotgun sequence Length of sequence - 40875 bp Number of predicted genes - 37, with homology - 34 Number of transcription units - 16, operones - 11 average op.length - 2.9 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 56 - 493 403 ## COG0251 Putative translation initiation inhibitor, yjgF family 2 1 Op 2 . - CDS 490 - 663 179 ## HMPREF0675_3267 hypothetical protein 3 1 Op 3 . - CDS 660 - 1043 150 ## PPA0220 putative regulatory protein + Prom 963 - 1022 3.0 4 2 Tu 1 . + CDS 1066 - 2091 930 ## COG0673 Predicted dehydrogenases and related proteins 5 3 Op 1 . - CDS 2127 - 2282 70 ## 6 3 Op 2 . - CDS 2209 - 2424 112 ## - Prom 2621 - 2680 3.7 + Prom 2230 - 2289 2.1 7 4 Op 1 3/0.000 + CDS 2318 - 3613 726 ## COG0814 Amino acid permeases 8 4 Op 2 . + CDS 3677 - 5014 850 ## COG3681 Uncharacterized conserved protein + Term 5048 - 5083 0.8 9 5 Tu 1 . - CDS 5129 - 8452 2674 ## COG0060 Isoleucyl-tRNA synthetase 10 6 Tu 1 . + CDS 8594 - 8821 93 ## gi|328759430|gb|EGF73046.1| hypothetical protein HMPREF9588_00054 + Term 8974 - 9013 0.0 11 7 Op 1 . - CDS 9098 - 9706 198 ## PPA0215 hypothetical protein 12 7 Op 2 . - CDS 9700 - 10542 237 ## HMPREF0675_3259 hypothetical protein - Prom 10612 - 10671 2.8 13 8 Op 1 . - CDS 10902 - 11636 187 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 14 8 Op 2 . - CDS 11630 - 11845 67 ## 15 9 Op 1 4/0.000 - CDS 12239 - 13048 590 ## COG0561 Predicted hydrolases of the HAD superfamily 16 9 Op 2 . - CDS 13058 - 13858 656 ## COG0561 Predicted hydrolases of the HAD superfamily 17 10 Tu 1 . + CDS 13969 - 15804 1099 ## COG2966 Uncharacterized conserved protein 18 11 Op 1 36/0.000 - CDS 15808 - 18423 1044 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 19 11 Op 2 1/0.000 - CDS 18447 - 19229 275 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 20 11 Op 3 . - CDS 19235 - 19810 519 ## COG1695 Predicted transcriptional regulators 21 12 Op 1 23/0.000 - CDS 19918 - 20523 526 ## COG0353 Recombinational DNA repair protein (RecF pathway) 22 12 Op 2 30/0.000 - CDS 20554 - 20877 324 ## COG0718 Uncharacterized protein conserved in bacteria 23 12 Op 3 . - CDS 20987 - 23833 1569 ## COG2812 DNA polymerase III, gamma/tau subunits 24 12 Op 4 . - CDS 23928 - 24284 356 ## PPA0203 hypothetical protein - Prom 24309 - 24368 2.1 + Prom 24272 - 24331 2.3 25 13 Tu 1 . + CDS 24567 - 24932 308 ## COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) + Term 25103 - 25144 5.0 + TRNA 25012 - 25096 50.2 # Ser GGA 0 0 + Prom 25014 - 25073 80.3 26 14 Op 1 . + CDS 25302 - 26024 537 ## HMPREF0675_3243 hypothetical protein 27 14 Op 2 . + CDS 26144 - 28021 541 ## HMPREF0675_3242 YD repeat protein 28 14 Op 3 . + CDS 27931 - 30906 1154 ## COG3209 Rhs family protein 29 14 Op 4 . + CDS 30947 - 31858 577 ## HMPREF0675_3234 hypothetical protein 30 14 Op 5 . + CDS 31868 - 32521 329 ## PPA0192 hypothetical protein 31 15 Op 1 . + CDS 33162 - 34124 742 ## HMPREF0675_3232 phosphotransferase enzyme family protein 32 15 Op 2 . + CDS 34198 - 35241 625 ## HMPREF0675_3231 hypothetical protein 33 16 Op 1 . + CDS 35413 - 36102 555 ## PPA0189 hypothetical protein 34 16 Op 2 7/0.000 + CDS 36105 - 36593 301 ## COG1716 FOG: FHA domain 35 16 Op 3 4/0.000 + CDS 36597 - 38084 693 ## COG0631 Serine/threonine protein phosphatase 36 16 Op 4 19/0.000 + CDS 38081 - 39472 1016 ## COG0772 Bacterial cell division membrane protein 37 16 Op 5 . + CDS 39469 - 40873 1041 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 Predicted protein(s) >gi|302034503|gb|GL383248.1| GENE 1 56 - 493 403 145 aa, chain - ## HITS:1 COG:MT3779 KEGG:ns NR:ns ## COG: MT3779 COG0251 # Protein_GI_number: 15843295 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Mycobacterium tuberculosis CDC1551 # 1 145 1 144 151 120 55.0 9e-28 MSATTRCAELGITLPPVAAPVADYVPAIQTGSQILTSGQLPFVDGELTAVGKVGDAVSAE QAAEAARAAALNAIAAAADVAGGLDAIKRIVRVVVFVNSAPDFTGQAGVANGASQLLGQV FGEHGRHARSAVGVATLPLGSAVEV >gi|302034503|gb|GL383248.1| GENE 2 490 - 663 179 57 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3267 NR:ns ## KEGG: HMPREF0675_3267 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 57 1 57 57 114 100.0 2e-24 MTRWEYFTAPILVHASQQILNNFGADGWELVQIVAGPNPDSLVGYFKRPLPDQEEPR >gi|302034503|gb|GL383248.1| GENE 3 660 - 1043 150 127 aa, chain - ## HITS:1 COG:no KEGG:PPA0220 NR:ns ## KEGG: PPA0220 # Name: not_defined # Def: putative regulatory protein # Organism: P.acnes # Pathway: not_defined # 29 127 1 99 99 159 98.0 2e-38 MRYHGPSCSQFDYLVPCQKASVSRTVRFVESNEADDWTLQANCRGMADALFPDGKEQRRA RRICTDCRVRPECLAEALDNRLEWGVWGGMTERERRRLLRERPDVTSWRDVLLADRGTLT KTARVKS >gi|302034503|gb|GL383248.1| GENE 4 1066 - 2091 930 341 aa, chain + ## HITS:1 COG:BMEII1125 KEGG:ns NR:ns ## COG: BMEII1125 COG0673 # Protein_GI_number: 17989470 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Brucella melitensis # 9 325 13 346 349 183 35.0 3e-46 MDTTTTIGWGIAGTGRIARTILKDFAHVPGARICAIASRSAARADAFADLVTQNLSCPRP DTHDSYVDMITNPTVDVVYVATPHPQHRPIALAAIDAGKAVLVEKSFAATAHAAAEIAEA ARAKRVFAMEGMWTRFLPVVTEMIDAVNNGAIGEPTGIQGDLFALRDYDPDDRLFSPALG GGVTLDLGVYALDFAIRLFGEPTEVIARGNHFPNGVDSDASMLLTFPKNKFATLAISFTS DGPGRMTIQGTDGWIEVEPRFHHPSRILIHRRGVIPEIHNTPALGRGYAHELMEVCQCLR AGRTESLTMPLDDTLAVARTMSRVLDQLGVENYDDTELSHA >gi|302034503|gb|GL383248.1| GENE 5 2127 - 2282 70 51 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLAYSLPCIEQVVVEVSMIIQQGRKGSGTSVTEFGLTSVRTISWRGRGVGE >gi|302034503|gb|GL383248.1| GENE 6 2209 - 2424 112 71 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLIMIQPQSVLSNLMAFRHSCSVILAGRSTVTNVFMGINFVEIRIFDDASILLTLHRTGS RGGVHDYPAGT >gi|302034503|gb|GL383248.1| GENE 7 2318 - 3613 726 431 aa, chain + ## HITS:1 COG:ECs3991 KEGG:ns NR:ns ## COG: ECs3991 COG0814 # Protein_GI_number: 15833245 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Escherichia coli O157:H7 # 11 431 20 443 443 566 73.0 1e-161 MNTLVTVDRPASMTEQEWRKAIKFDSTDWGWIIMSIGMAIGAGIVFLPVKVGLVGLWVFL VSSVIAYPAMYLFQRLFINTLAESPECKDYPSVISGYLGKNWGFFIGILYFIMLVIWVFI YSTALTNDSASFLHSFGVTKTVWSHNPFYGLVVICIMMAIASRAEKILFRISTVMVLTKL SVVTFLGLAIIGSWNLANVGAFPSLGYLVKQTIIMLPFTLTSILFIQSLSPMVISYRAHY RSIEVAHHKALCSMNIAFSVLFITVFFYAISFNLTMGHDVAVKAYNQNISTLAMVAQGMG GTTVKIFSLILNIFAVMTAYFGVFLGFREACQGIAMNVLRRLIPEERINKKIVSWSILVF AILVSWGAILLNAPVLSFTSICSPIFGMIGCLIPAYLVFKVPSLHKFRRPSLILIIATGI LLVVSPFLAFS >gi|302034503|gb|GL383248.1| GENE 8 3677 - 5014 850 445 aa, chain + ## HITS:1 COG:STM3238 KEGG:ns NR:ns ## COG: STM3238 COG3681 # Protein_GI_number: 16766537 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 17 442 12 434 436 280 45.0 3e-75 MQKTRCQTPLSPSEINNLIEALHQGVTPATGCTEPIALAYAAARAKRALGSDAKQLDSLH IDARVSPNIMKNGMAVMVPGTGRPDLEIAAAVGALAGNPDAGLAVLADVSEDAAEKARHL VDSGAVELTVADVDDDLYAETVLHLDGHHARACIAGDHTNVFLVSRDDEVPESKERPAAG HVPPTAALLQGLSLAKIYDFATTVDIERIEFITEAERLNSALVDAGRDGSYGIGEGAAIL GSIDRGMASDDLCTRMTAYTAAASDARMGGAPLPAMTNSGSGNQGIVATVPVTVAADYAG VDHERRVRALALSHAVALYAHAGLPVLSAFCAATTAAMGAAAGICLVLDGSYSAVERAVA SMTGDVVGMVCDGAGCSCALKVSASVNSAGRAALLSLAGRRVPGTNGLVHDDVDAAIRGI GRLGTEGMKQTDPEILSLMMAKQTV >gi|302034503|gb|GL383248.1| GENE 9 5129 - 8452 2674 1107 aa, chain - ## HITS:1 COG:CAC3038 KEGG:ns NR:ns ## COG: CAC3038 COG0060 # Protein_GI_number: 15896289 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Isoleucyl-tRNA synthetase # Organism: Clostridium acetobutylicum # 15 1083 2 1009 1035 820 40.0 0 MTDVNPVRSDNCRQYNNVPPQIDLPAMDHEIIDLWARQHTFDKSLEATKDGQPWTFFEGP PTANGQPGTHHVEARVFKDIFPRFKTMQGFRVDRKAGWDCHGLPVELAVEKELGFSGKPD IEKYGVEPFNAKCRESVTRHVDAFSELTERMGYWVNMDEAYWTMSPSYVESVWWGLKRIW DKGLLGEDHRVAPYCPRCGTTLSDHELAQGYQDDRDPSIYVPFPVTSGPLAGRAKLLVWT TTPWTLVSNTAVAVHPEVRYVVAHQDPVPEGSDAVATASAEDPASQDLIIAEPLFEKVLG EGWSLTGESFLGSQMELWTYERPYNFLEWPKTERVTVDGRPTPADANFVVLADYVTIEDG TGLVHQAPAFGADDLQTCRRYGLPLVNPIRPDGTFEESVPLVGGQFFKTADKPLCEDLDR RGVLFRLEMHWHSYPHCWRCDTHLIYYAQPSWYIRTTKVKEQLLAQNEGTTWYPETIKHG RFGDWLENNIDWAVSRSRYWGTPLPLWRNDDDHSDVICVESLAELSQYVGHDVTGMDPHR PFIDEVTFTRDGHTYHRVPEVADAWLDSGSMPFAQWGYPHVPGSKEKFESHYPGDFICEA IDQTRGWFYTMMAVGTLVFDESSYRNVLCLGHILAEDGRKMSKHLGNILLPIPLMDSHGT DALRWFMAADGSPWSARRVGDETIQETVRKVLLTYWNTVSFQALYARANGWSPAQGTQQD ADPARGSGDSRGFGGVVPPAVTQRHVLDRWLVSATNVLVRDVTEALNNFDTQRVGNLIAQ FVDELSNWYVRRSRRRFWDGDEGALWTLHETLETLTKLMAPMVPFITERVWQDLFVTTNP HGPESVHLASWPVVDDSLIDESLSESMDLARRLVELGRGARAEAKAKIRQPLSRALISGA ALAKLDEDLQAEIRSELNVMALDSFTAAGDLVDHCAKGNFRALGKKYAKATPKVAAAIAA ADPEWLASELAIKGSVELDVPEVEGGKAVVTADDVIVSERPREGWSVVNEQGETVALDLE ITPELARAGQAREVIRFVQDSRKKAGLDVSDRITLAWSASADLAKAIEEHAEQISQEVLA VQMSREPRADDWAVELDLGLAVKVVKV >gi|302034503|gb|GL383248.1| GENE 10 8594 - 8821 93 75 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|328759430|gb|EGF73046.1| ## NR: gi|328759430|gb|EGF73046.1| hypothetical protein HMPREF9588_00054 [Propionibacterium acnes HL025PA2] # 1 75 1 75 75 130 100.0 3e-29 MYALARSSSDSGVIAPSLPCGRKHLTPTEENCGGSPGTVAMMSLYGIVATTDARNDHHLP KCHTPGNSPGLHVVT >gi|302034503|gb|GL383248.1| GENE 11 9098 - 9706 198 202 aa, chain - ## HITS:1 COG:no KEGG:PPA0215 NR:ns ## KEGG: PPA0215 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 7 202 1 196 196 311 96.0 8e-84 MLSGNVLLGWKAWARNRSLLSLLAATVVCCVLIGLTSEVIVAIPPFLTGRGVDVPNAAVV PLCVVIVQGWCLSRRDTRLEAGSERRTALADCLLSTTPAVLVGILAYVGNLPVGMVATRN TVGLSGVTLLANALGVKRLSSLPATIWVLMSLLAGSTASFEAPWSWPVKDRTDVLSAVLS VALCLLGISALLVKPRPWRNRG >gi|302034503|gb|GL383248.1| GENE 12 9700 - 10542 237 280 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3259 NR:ns ## KEGG: HMPREF0675_3259 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 280 122 401 401 503 94.0 1e-141 MLAWGVVGAVIGMSWPLALAAPTALLIPFILVLYGPAVSVLELRYLVGYYMDCCNVGEML DPQVLAAGMTMACGVLVVSMVALIASRLRYHSSAIVTVILIIGLVSTVLIGFREVEGVGA FPAVPRTGTQTCLKDPTVCTWDAHDLQLLGPIVQKADAAWRANGVHVPRAYRQGIEQSTQ TTVWWSASAEDVSESALPALSAVAEGLAVAPCQVRQDEVEIWVQNVQDRVVAWLVEHSGI KVRDTALSPETREWLKSIDRLPIEKQASIIEHDRARLRTC >gi|302034503|gb|GL383248.1| GENE 13 10902 - 11636 187 244 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 2 219 1 224 305 76 25 2e-13 MVTQTLQLEGVHFSYPRCKSRLFTELNLILGDTGPTVLLGLNGAGKTTLLRLCAGELQPS AGLIAVNGGKHPRSVVSLMPQQIRPIPGFRVVEQVAYSAWLGGCSSSQSEKRAIMALEAV QLEDRLKDKPNQLSGGQLRRVGLAQALVGEQPIVLLDEPTAGLDPAQKHVFRNLLTELGA TRSFVVSTHDTSDVDSMYNRVVILHKGRIAYDGSTDEFLMHGAGSSHAAEAAFLDVVGVS EQAR >gi|302034503|gb|GL383248.1| GENE 14 11630 - 11845 67 71 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIPKTVTYNLRRVKDFRPDVNIGDKTLSCAKTGSVYYGRPPAGTYRFRLVGLTGGSPTWL KLSVRDFRIRW >gi|302034503|gb|GL383248.1| GENE 15 12239 - 13048 590 269 aa, chain - ## HITS:1 COG:DR0240 KEGG:ns NR:ns ## COG: DR0240 COG0561 # Protein_GI_number: 15805275 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Deinococcus radiodurans # 2 265 17 281 284 190 46.0 2e-48 MLIATDLDGTLLTPDGAISPRTRDAIRVAEKAGVPVVPVTARQIYGIEKWRDDLGRWALC SNGAICWDLQARTVLFRQLMPGAVANEFAHRLLDAAPGTRFLTIKDDGLTFASQRGYAEL TTFADHSREPSDMPALDLDEVLDGDCLKMVARHPNLPVAELAARAASVGMAGEVHVTTSG KPMLEISAKGVAKDSGLSMLCDHLGIEQRGTVAFGDGANDVEMLAWAGDSYAMAHAVPLA VAAARHRAPSNAEDGVAQVIEKLLAMRER >gi|302034503|gb|GL383248.1| GENE 16 13058 - 13858 656 266 aa, chain - ## HITS:1 COG:DR0240 KEGG:ns NR:ns ## COG: DR0240 COG0561 # Protein_GI_number: 15805275 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Deinococcus radiodurans # 2 264 17 281 284 164 42.0 1e-40 MLIATDLDGTFLTPDATVSPRNRAAVKAAEAAGIHVIPVTGRAIGGLRVIGPVFHRHALV SNGAVGTDMSTGETLFTETMSARTVKSYVDQLTAECPGVVFCAEVGDSSVFLVEEGYDEI VPAFESENDPAEHVLVSRKELCSSEAVKLMIVHPTVLASDIYQLSRRLRVPGVHATWAGF TVAEAGPAGVTKASGLERICQLLGEDRAHVVALGDGANDVEMLQWAGVSYAMGGAKPEAI AAADRRAPSCEEDGFAVVVEELLASR >gi|302034503|gb|GL383248.1| GENE 17 13969 - 15804 1099 611 aa, chain + ## HITS:1 COG:Rv3737_1 KEGG:ns NR:ns ## COG: Rv3737_1 COG2966 # Protein_GI_number: 15610873 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mycobacterium tuberculosis H37Rv # 140 391 42 287 292 126 32.0 2e-28 MAEKRPGARSGSASRNHPRSWHGDDPIPRTADGIDARIFRPGQASAQPATPPQSSATPPE PPVDEENPTRMAPVGNLSRSWPLTRSRTVSPHNGQAKLRHSRPPRAHRTRRVSLEKLFRA KTPVEPTLALNLGDAEMAIMQARRVVDLVTRVAVMAISVGGSASEAVAIALRITATYGVT VHIDITNTSVIVTQHRGLDEDPITVLRVVRSRSNDYQRLGELQLLVDDICDKTVGLEEAA DRLAAITRSPRLYRQWFVTMNIGLMGAGLSTLFGGTVMDGVLSFFSTCIVDATVQAMARK RITNFFAQAAGGAIATTFALIVMVYMAASNHPLPLSPSLIVAAGIVSLLAGGSFVAASQD ALDGYVVTSSGRFLEGFVQTGGVILGVITAMWIGLRLGVPGYISPALGFSTNPVLQMVAA AVIAVTFGISSHAGYRTLAICAALGAAAWAGYLLGMQLTGSVSAASGLAAMVAGFIAGLG AKRWKVPQLGLVTIAIVPLMPGVMMYRALYMIVNAQNETGGTSNAGWTLFLEALLVGVAL AVGGSFGALLARPFTLPKDLRSRLATLASWGAGQAVPRERRRRRSQPPADPHHPALNNTE TDPTVTGTWAR >gi|302034503|gb|GL383248.1| GENE 18 15808 - 18423 1044 871 aa, chain - ## HITS:1 COG:Cgl2500 KEGG:ns NR:ns ## COG: Cgl2500 COG0577 # Protein_GI_number: 19553750 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Corynebacterium glutamicum # 23 463 7 452 853 62 22.0 4e-09 MPTSAVRLSGDAIARGRPHRRLINRLAVRDIGRHKLRSLLIVMLIALPVAIMSGLGVLLR SDGSISGSQALNNYGDADMVISPISNWDGHCSQQGPTNPYCDDGAEPDVRQRTQQQTALA NLTLPGHKLHLLRTTEASVSWRLVTLSATVKAMDLTTMRPYRMEFPRGPMPTGNNIWVTT GAAKDYGWSVGSRVTVNGHRYTITGVVREEWPGNGPTFWVAPRSPLARGGELTYYVNGAS LTRQQVEKLNASGVGVADRRAEESASQGDTFERDMFALILAAGVLSAIVVATIAAAAFAI GARQQRRMLALLGITGAARRDLMGVMIHQGLLLGLTGALLGVGLGVGMGNGAVAIIRMVY PDYITYGVDWGYAAVGSVVGLLAALTACWFPARDVARQDALMGVKHAESAARPARRPTLA IVIAAIGLLAGVGGVIYGRRGTTGDVMVRLNIGIIVTIVVLYLAAVSAMPWLVDKVSGRK SSRLPIRFALRDLNRNRGRAVPGVAASMAITVLACAAVTFCDSLAIQDKAEYVPEFGDHI GVLAGEHDDGVRTSDDRVAGEIKRVTAVFGPHVKYLRPEEPVTCGQDGKYCTSSLEVTPK VPNGAMSSTVAIDDGTLYELLTGEKADGRVMKALDDGVVLFSPDATRISQAIISDHDERH GAGTTVLPAIHAPHHALGYGVPNLISRRTAAKVLGVSPDNMKTQSTTVWLRLPHTPTAKE GDRLQHSLMDVTGSPSEFIWEKGYSDISGTVMRWSAVVGTLLAVCVGAVVLALTLSDSRG SRTAIASVGASKATLRRMVAAQALVTTGLGQILGFLVGFVPVAVMTCVGPRWPMPMPLPW LALIVFAPPVLLALVTMVAVPVPRPRMQRLD >gi|302034503|gb|GL383248.1| GENE 19 18447 - 19229 275 260 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 20 259 1 234 245 110 30 1e-23 MTSTPLHAADQITPTMQRTVLSLDHVSRSFGEGEQRVDAIVDVSLGVNPGTFAAVMGPSG SGKSTLLGLAGGLDQPTSGTVSVCGEPLGGMSRDDLARVRRRQLGFVFQDYNLVPALTAV ENVSVPLELDGVSATRARKAAEIALERVGVPGLVDRHIEKMSGGQRQRVAIARGIVGDRR VLLADEPTGALDSVTGDEIMALIRTLADEGVAVVLVTHEARHAAWADRVIFLRDGRLVDE SQVVSDPMELLNDNPKRGRW >gi|302034503|gb|GL383248.1| GENE 20 19235 - 19810 519 191 aa, chain - ## HITS:1 COG:Cgl0834 KEGG:ns NR:ns ## COG: Cgl0834 COG1695 # Protein_GI_number: 19552084 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Corynebacterium glutamicum # 1 164 1 166 169 102 38.0 3e-22 MSIKFAILALLAEKPRHGYEIKNEFDRRTNHTWPLNIGQVYTTLDRLERDGLCYRGEETP DGRVIATISPKGREEVRRWFTTPIAPANPPRNELAIKIALAATSKDVDVATLIQDQRHAT MHQLQECRQARRSVAEDDLAGQLLVDGMIFAAEAEIRWLDHCESKAVQASHAHPHQPVEP VTDGSKAVQEA >gi|302034503|gb|GL383248.1| GENE 21 19918 - 20523 526 201 aa, chain - ## HITS:1 COG:lin2850 KEGG:ns NR:ns ## COG: lin2850 COG0353 # Protein_GI_number: 16801910 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Listeria innocua # 2 197 3 198 198 236 56.0 3e-62 MYDGPLQELIDALSRLPGIGPKGAQRIAFHILDAPEEEANELADALREVKEKAKFCKICF NVSSDEVCQYCRDPRRDQSMICVVEESKDVIAVERTRQFRGLYHVLGGAISPLDGKGPAD LHIRELCQRLADETVTEVILATNPNLEGEATATYLSRLIAPMGVTVSRLASGLPVGGDLE YADEVTLGRAFEGRLRVGVGA >gi|302034503|gb|GL383248.1| GENE 22 20554 - 20877 324 107 aa, chain - ## HITS:1 COG:AGc145 KEGG:ns NR:ns ## COG: AGc145 COG0718 # Protein_GI_number: 15887449 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 12 104 3 95 107 57 34.0 6e-09 MTTGGFDLGGLDMGALLAQAQSVQNQLEAAQNQLAESNFEGTAGGGLVRATVTGTGELDA LTIAPEALEDTDAETLADLVVAAVKDATGQARAMQQSLMPQMPSLGL >gi|302034503|gb|GL383248.1| GENE 23 20987 - 23833 1569 948 aa, chain - ## HITS:1 COG:ML2335 KEGG:ns NR:ns ## COG: ML2335 COG2812 # Protein_GI_number: 15828258 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, gamma/tau subunits # Organism: Mycobacterium leprae # 99 541 1 443 611 447 54.0 1e-125 MENEAVEPEVFEQDGPDLFGDEESPRPVMPPDEATPDDDLPSDPRDPGLLDGPETPEEPD GLQTDEDEEDGADVIERVRELIGEAPDSNPDDDLPELPLALYRRYRPETFDEVIGEDHVI EPLKRAILNNRVNHAYLFSGPRGCGKTTTARILARALNCEQGPTPTPCGTCQSCRDLACG GPGSIDVIEIDAASHGGVDDARDLRERAFFAPVHSRYKIYIIDEAHMVTPQGFNALLKLV EEPPPHVKFIFATTEPEKVIGTIRSRTHHYPFRLVPPKVLVEYLAELCGKEGIDVDHAVL PLVVRAGGGSVRDSLSVLDQLLGGAADGHVSYEQAAALLGYTPEALLDEIVDAFAAGDAH QVFATIDKVIEVGQDPRRFAEDLLRRMRDLVIVSAVPDACRSGLIDVSPEQATRLTHQVA GFGAGELTRAAEVLATGLTNMRGTTAPRLHLELMCSRILLPGADTDGRGIHARLERLERR IGVSGPVEEVERAERPVTAQPPTRYADTPQQASPPQHWPAENLQNPERRSAPEHHDAPSP GQRPSGRPRPSRKDYRPGNQLAEQPPSNQHGDDGQMSQGPRQQGGPSTSQRQQPRPQDHQ PSQRDRQDSPPAQPQQPSAEQGGRADDAINITTLRREWPQVLEAVKDGGRVAWMVLNQYA QVLEVHGNQATLGFSNIGARENFAAGNYPKVLHDAVVKVLGVDLAFTAVVGEPPAAVRPE SHPAEFQSGPAAQEPPDDDPWEQGPHHQDSTRGGEPSDPTHPGRDPQGRPGDRQAISDDA SKDAPPPPVTSSHPSEAGDDDPAPDATTEDQSADVRDEVVESGPVAGAPDPDSGGAAEPK PDLVPGQDHVEAAGGAESARQIDPGGASSQGRPSAAAVSTAHRWSERAKGSVRPLEVTSR SAQVEEPPDDGGEWDDTVVEESNESPIDLIMRELGGVVIDTDGDSTAR >gi|302034503|gb|GL383248.1| GENE 24 23928 - 24284 356 118 aa, chain - ## HITS:1 COG:no KEGG:PPA0203 NR:ns ## KEGG: PPA0203 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 118 8 125 125 215 100.0 4e-55 MDDQRRIITTDRAGSIWAGITWCSLLLFIVAGIIGMMAQTMLPANLGYPQLHDSGVPTWL TWTVVGLDVVAFFIPPLVTTSCGRKAKRLGHPVRSAVQISWATFTVVTVISFLLVFFG >gi|302034503|gb|GL383248.1| GENE 25 24567 - 24932 308 121 aa, chain + ## HITS:1 COG:Cgl2072 KEGG:ns NR:ns ## COG: Cgl2072 COG1188 # Protein_GI_number: 19553322 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) # Organism: Corynebacterium glutamicum # 3 116 10 124 126 95 46.0 2e-20 MTRIDVWLWSVRVYKSRSLATAAVKGGHIRLNGDPIKPSHDVKPGDTVTIHTPGWDRVLK VVNPITKRVGAKLAVEAYEDLSAPRPAYLSAPLARRDRGTGRPTKKDRREIDRLRGRDSR Y >gi|302034503|gb|GL383248.1| GENE 26 25302 - 26024 537 240 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3243 NR:ns ## KEGG: HMPREF0675_3243 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 240 1 240 240 416 99.0 1e-115 MTKKLTKTCLLGMVGIMAIGLAACGDKTNSSSDTPANPSPSTKAVKRISKDDFTKAFSHK KIDGHTFVIQDNSQLRPVVDNLDKTLSQAKISPAGCDAALRQSSLGLTSNEISDTLVAVS DKPSTRIIVTTAMSDRQKKAYKSQEEQTSKCGHTTLSTQGVNHGLEINIKASPIKGYENI SKQAALFDVSIKRSTGTSDHGYQAYIWLNNDQAIRIFGRDAGIVKSTLQSATKALGIAKK >gi|302034503|gb|GL383248.1| GENE 27 26144 - 28021 541 625 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3242 NR:ns ## KEGG: HMPREF0675_3242 # Name: not_defined # Def: YD repeat protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 552 1 552 930 1007 92.0 0 MVDFSIFGDYQNPVEFNFSTAEGFSSQLRWTSQRINIFYARTPRVESIAAREFRGFFATV FAQNMQVCSADAEALSEALTAAADIVDYLTEQARLENERRQKVRDFAAQHDDFSDHVRDF FTGVDVPPNLTPAEPPPPQLLRLPLTRQRQQDRSIRGSSGGISAADPKDLISAAQVLGEA AAQVPSGSVLAGWFDDFTSQCKYGTVEVGDLFVQLDRWRGLNDGDVEWLHAVAKAFQAAG SGVITLPNSALRAALRAAGTPLWRTDLDITSPGLSGIDPRTGYLEDPINSATGNFIEPET DLAFAAASSPLVLSRMYNSIQAVRGQGGVFGPGWVSILDQCLLVKPGCVEWVREDGRHIA FAVEAAPTAVLPTTNQLPNPAEEDEKPVEQWRAQGENLWLSRVSASQLPEFLRDPATSKW VWVISDNRGGRWVFTEGGAWVCSGSSQRDVVHTVREGDRVTAMETSWGYRISVSYDGTKV MSAVSSDGRRCRYSYDDQERLVQVDRPDGSRRYEWDDTLITTVVDACGNAECINSYDDRG RITSQQATNGRTSISGICLGASPPPAMRMAPMPIPGYVMLTVAPQVWSTPMVARFRWPTI PSAIWCVVSIGLETSPHTAMTSEGD >gi|302034503|gb|GL383248.1| GENE 28 27931 - 30906 1154 991 aa, chain + ## HITS:1 COG:YPO0762 KEGG:ns NR:ns ## COG: YPO0762 COG3209 # Protein_GI_number: 16121077 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Yersinia pestis # 1 553 582 1140 1438 149 25.0 4e-35 MAYDSFGNMVRCVDRAGNVTSHRYDQRGRLTHTDLPTGATIDCSWDGLDRLVSTTLANGA QTTFEYDGTERDPVRVTDPCGGVTVAEWKDGLLLRATNPVGVSLRFSYDHHAELVRVEDA HGEASRLIRDEAGRIVETISPGGATTRFSYDDAGRLAAVVTPDGATWEHRYDVAGHLIEL VAPDSGVTKWEYHPDGQISRVIDPLGRVIEHSYDHLGNLAGMQLPDGSAWSFIHDALSRL TQVVAPDEARWTYAYDVDGNLSGVTDPAGFARVFTDGLTASTASDSHGHQLHRVDADPYG LTTAVTDVTGAQQIVTRDLCGRPVEFQDESGAVTHVERDLAGRIVALVSPTGLRTSYSYD ACGRMVDVTDPAGRVTRYSYTSDFQVATVTDPTGETARYEYDAMGRVVLSHVPGAGVSQY RYDPCGRLVFSCDLVYGQRHFSYDLAGQLVAATNSAGGVSRYGYDRCGRPTRTWDPVAGT RHFRYNTAGRLITAVDPAGGVHRYTWDKRGRLVTTTDATALTTYRYNQLDQVVESTDPAG GTHRYTWNPAGRLTSHTGPDGTTTSYDTRDGVETVTIDGQVSTRRWWDFEARQLHIDDHS DPAVPVHHTISVDVRGLVCDHTTTDGDGKVISRHHWDWDSEGRLTRANDTHATVSYTYRG DGLPTQITHSALGAASLAWDSAGRLTDVTTPNHHDHWDHDGGLVCGYAHDGRVTRVARDA QGRVTGIEGPSGCWSYGYNEAGSLINATGPRTQHNWTHDTYGRLTSHATSGTDTTFTWDQ EGHLAQTCTRAHGHATATQYRYDAAGRRISATSPDGQEERYSWDGRGWLSGITTDATTVS THVDALGRASRITTGDQQVRVDWDLVTGAPTSIDGHPVLPLPGGRILGATPIGDTNLWRE VMPTDPDNPYQPATVAIEGVPETIRMAGNALVVDSHPWWGARLYDPTTTTTFLSPDPLTS PAGALWANNPYDYANNNPLTPHRSSRDPPRH >gi|302034503|gb|GL383248.1| GENE 29 30947 - 31858 577 303 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3234 NR:ns ## KEGG: HMPREF0675_3234 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 303 65 367 367 491 99.0 1e-137 MHHITDPISHWWATHKDRILSRDFLIGAGLVIGGIAVAATGVGGPLLAAAISGGLISGGF SASSQKYATGDVNWGTVSKEALIGFVVGGVGAGTTNLVGTQVLKHSDTAAAAITKFSVRD EVRFAQTGLKGILNANTAANNALKLAAKSGDLDALETMYIHHFAGSAASNFAASNTQYIM DTAMSHDKHFSASGLAQANGNAIFGVVLSARGNAMARPNISFNNGCFKRGPALLTDTMGV KQQFSTFGHELVRGAIADATTQEISTAMNGQDPHDFADGFSKKTAHTLGNAAHTSFPGLH TSK >gi|302034503|gb|GL383248.1| GENE 30 31868 - 32521 329 217 aa, chain + ## HITS:1 COG:no KEGG:PPA0192 NR:ns ## KEGG: PPA0192 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 150 1 150 233 298 94.0 7e-80 MFIDNSAGPREFGPNDDASLELPAEGAYRVQEALRVMGWDPHHPRVFSQAKGLVPVWLPL TAEITWGMLSIFLSNSDGIRDSIGGWFCFIFFLGTPVWILSDVTLRRYGVDYDKIWTRFG HLFYHQIRFTDITRFDIGGHRYKSGPEKPKSTSTTTDTTTPSYICDSPKNSTTATSNSPK PTSPTPTGTKKPKYGATSWQPMPIENTATSTTPTPNN >gi|302034503|gb|GL383248.1| GENE 31 33162 - 34124 742 320 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3232 NR:ns ## KEGG: HMPREF0675_3232 # Name: not_defined # Def: phosphotransferase enzyme family protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 320 1 320 320 602 99.0 1e-171 MKPSRVRWDQLPDSVHHRVAEILGSPVSVDHVQTHGTTPGVASRVVTADGSHAFIKIGHP AINEAIPSLNRREATLLSLLPDTAPAPRLLGRIDVDGWVGMVTSDIEGPHPDLPWSDEDI DTTLASLSRLTEVTADFHQQWEPFSARLQNTPSVWEQFMADTPTDLDPWLIERLPDLAGR VERLARHAYGDTVIHNAVRSDNVLLRTSGTVLVDWSHAVIGPAWVDAAGLIVDIIHTDPI DAPRWNRADDLVKRVAAEFSPSTHGGPAVEPIVDFLVAILGLSERECRNPDPAGMPQFRE FQRERASRLRAWLWASEHLA >gi|302034503|gb|GL383248.1| GENE 32 34198 - 35241 625 347 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3231 NR:ns ## KEGG: HMPREF0675_3231 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 347 1 347 347 595 98.0 1e-169 MHLNLGLAKTINRATHVTRGFRRIVMVTAAGEGRPGRLVADLTNEFSRRGIDVSQLPIEG SEDTASSMPAPAHKVLAKWSRHRQGTARHELVESLDHQCALIVTDPRRLDEIVGLQAQSN RPVVVLLATDPDNAPDKLPEIVDVVVTPNPQTEPWEHLGVPVHSIGVPATGGSPAPGDRP NRIALLGPCTDEQLADALLAFDHACQVVPGWSLEICLDDESRARSAVAARRDVGIHPAGS ENTVMNQSELALVMTRKEDLASRILDAAGAGLPAAAYADTPAAADILSRCGYPAAGELSS ALAQGMADAPLRRIQREYVAEVLADHAGAKIGEAWLDLMFNVGRSHH >gi|302034503|gb|GL383248.1| GENE 33 35413 - 36102 555 229 aa, chain + ## HITS:1 COG:no KEGG:PPA0189 NR:ns ## KEGG: PPA0189 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 229 1 229 229 437 100.0 1e-121 MGFLDKVEKSIEGAVSGVFARAFRGEVEPVEIAGRLQRELDSEAQILSRDKSLVPNDFVV RLSSRDYERLVPYTKTLNAEIIPTLRDHASERHYVFNGPIHIRYDLDDALPVGKFTVLTG ENHAKAVSDRRAPLVLEVDGVRHPLTPPGLTIGRGSDADIRINDPGISRLHARINVWPQG NDIGLSIEDLDSTNGVTVNGVKVTSTELGDGSRIEIGSTRMLVHSPTRI >gi|302034503|gb|GL383248.1| GENE 34 36105 - 36593 301 162 aa, chain + ## HITS:1 COG:Cgl0046 KEGG:ns NR:ns ## COG: Cgl0046 COG1716 # Protein_GI_number: 19551296 # Func_class: T Signal transduction mechanisms # Function: FOG: FHA domain # Organism: Corynebacterium glutamicum # 1 156 1 150 154 92 36.0 4e-19 MSEFLVTLLRIAYLAILWIFILFVTNVIRTDIYGHRVPRNAGEAAVESGRRSKGRRTRRR EPAPIPTGLQVISGSRAGTFVPLANGVTVGRGNDCTLPIDDDYASTRHAEFSPGIDGAWF VEDLASTNGTHVNGERIENPTRLSVGDEVRIGRTTMTVTGRR >gi|302034503|gb|GL383248.1| GENE 35 36597 - 38084 693 495 aa, chain + ## HITS:1 COG:ML0020_1 KEGG:ns NR:ns ## COG: ML0020_1 COG0631 # Protein_GI_number: 15826883 # Func_class: T Signal transduction mechanisms # Function: Serine/threonine protein phosphatase # Organism: Mycobacterium leprae # 1 247 1 237 237 181 43.0 3e-45 MAFSLDIRCHSEIGLVRRNNQDSGYVSPRMLVVADGMGGAAAGDLASTVAVRHVAKADRR FSGEGSPARPQGEEMLTVLSGAVADANDELADLVAWDSSLEGMGTTFCGAMFSGTQLGIV HIGDSRGYLLRQGRMKRMTHDHSWVQSLIDDGRITPEEAAVHPHRSLLLKVLNGQPQHIP DTQIVDLRLGDRILFCSDGLCGLVNDDTIGEHLNTTNLDDVVDLLTTDAHAGGGTDNITI VVAEVVEADPNLDASEPHIIGAATTRKVPEHEVTAPLPLDQPASATNNDGKSTVLFDSEA EESMRYAPVDSMTRHRRHWLWPVVILAFVAVVVGGIFGARAYLNTQYYVGTDDDTVAIYQ GSPDNLAWIQLSHVTEKTNIKTADLPRYYRDRVLGNIRVSSMDSAHATVAELRTGAQQCK VIREAATAPPPTKPATPPSTPPQPSASGPTANAHHTPQPSAVPTPAMPTPTSAMPSPSAA GHEVDLPAVTSGDCQ >gi|302034503|gb|GL383248.1| GENE 36 38081 - 39472 1016 463 aa, chain + ## HITS:1 COG:MT0020 KEGG:ns NR:ns ## COG: MT0020 COG0772 # Protein_GI_number: 15839391 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Mycobacterium tuberculosis CDC1551 # 18 441 18 447 469 340 44.0 3e-93 MSIGQEFDDGTVVIQAKRRWTELFMLLIAWAIGFGGWVLTELNINHVLPDTWTTVGGVWL AVAIVAHIFVRFVIPYADPVILPIVFTLNGLGLAMIHRIDYIPDPHYHRMDAQTLWTALG IVLFVATLLILRDHRNLQRYPYVLFIVGLVFLMLPLVPSLGMATLGSRVWIHVGSYTFQP AEVSKVVLAIAFAGYLVDNRDVLSRAGHKILGITLPRARDLGPIAVMWVATMLVIVYQND LGTGMLFYGMFVVMLYITTERVGWAILGAVSFLGGAVLAYTCFGHVRVRFDSWLHPFSNY TQNYQIIQAQFGLAWGGLAGRGWGLGRPGMVPLAWSDFIATSIGEELGVTGLMAVIVLFF ILTARGMRTSLGCRDDFGKLMVAGLSFTLALQVFAIIGGVTRLLPLTGLTTPFMSQGGSS LIANWVIVAIIMIVSHRNRKPADDFTATVPAPDPQQAITGGTR >gi|302034503|gb|GL383248.1| GENE 37 39469 - 40873 1041 468 aa, chain + ## HITS:1 COG:ML0018 KEGG:ns NR:ns ## COG: ML0018 COG0768 # Protein_GI_number: 15826881 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Mycobacterium leprae # 1 468 1 481 492 282 37.0 8e-76 MNRQIRAVSLLAGLMFLALMVNLTGSAMFRQASLNNDPHNVRVRDAEFSQNRGNILVGSR PIATTTSSNGKFAYQRVYPSGPKYAPITGYYSYYYGRSMLEQTQNAQLTGTSDAQWLSRI TGTLSGHKPEGGSITTTINAKAQDAAWDGLRGKKGAVVALDYTTGAVLAMASSPSYDPNE LASHHLNDTTRAWKNLVADPSSPLTNRATREIYPPGSTFKLVTAAAALQNGYHPNSMVDS PENWILPGTRTPLTNETNCGGSRITLAHALDISCNTAFGKVGVSLGQDKIRDQAERFGFG KVVNSDVSSAASRFPQNLTDAQLAQSSIGQYDVAASPLQMAMVTAGIANGGKLMTPYLTA QVRASNLQVVSEHHPKQMSQPMTKESAEQLKAMMVSVVNNGTGKRARINGTTVGGKTGTA QTVKGKAPYAWFVGWSDNPHVAVAVFIQSSDTAINEVSGGRLAAPIAR Prediction of potential genes in microbial genomes Time: Thu Jul 21 05:18:41 2011 Seq name: gi|302034502|gb|GL383249.1| Propionibacterium acnes HL025PA2 genomic scaffold Scfld2, whole genome shotgun sequence Length of sequence - 2539 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 6 - 365 101 ## PPA1666 hypothetical protein 2 1 Op 2 . + CDS 301 - 2484 1393 ## PPA1906 hypothetical protein Predicted protein(s) >gi|302034502|gb|GL383249.1| GENE 1 6 - 365 101 119 aa, chain + ## HITS:1 COG:no KEGG:PPA1666 NR:ns ## KEGG: PPA1666 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 3 98 9 103 181 172 92.0 5e-42 MGGLMPRWCGEAGGSPALSRNRDHACVVWESGYQVTWGWCGVPLRVTGSASTRERLCCLW SPLGTFPWRDKMIEAATTKRRRVLGSLVVAAVVTGTVGGACPGSSSGWAETRRLRCPGR >gi|302034502|gb|GL383249.1| GENE 2 301 - 2484 1393 727 aa, chain + ## HITS:1 COG:no KEGG:PPA1906 NR:ns ## KEGG: PPA1906 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 39 727 1 687 687 1055 82.0 0 MPVPALAAGGPKPADYAAQAGKAADYINGHSADLTKGDLGPELDGALALISAGKTDAKLF GMIKKDIKAKGPSYCTSKNVGGCAKVTITLLAAGEPTTYGGTDYAKPVTSLPDSALKERP FHQALDMIALERLGKPIPQKLFKSITDYVSARPGRNYPSTDGLMLAALSHVVSTAYGQEG ITAVKAALVKRLDADRQTDGWGWPDHGANVRATTRVAPGLYRAGDANHKDQAVKGQAWLA GQQQVDGSFPSNVVSPAWTMMATVQAVPVLRGLQSLDTIGANPARAVTVDGWVPPRRLVK MTVLGDSYSAGNGTLVDGYPADGSYRSPKNYGSVLTRRLNREFGDDTTFQTDVRAWSGAQ ITTGDHTIVSQADGMDPHTHVVLMTAGGNDLDFTSVVENCFIERVWSAAECGGSVDASRK KIDATMTKTTTLLSHIQQRLADPAHTRVILIGYPYLIRADRDAPGSDVPSTRVRAAEDEF RTKQTATVKAWNKTHALKVTYTPTTSLFNTHEPEPLVHNGDQNPQRWINAVFETAGYSYN GNGVILSEPSQDEKNWYHPNVVGHEKIAGLVHDALLSRTVRSASLSESVAQVASVPGVRM RAAVIGQSQVRRGNPLSLDASSSYTAFGHIRRWQWDLDGDRHYEIDTTTPEITRTLTRIG TYQAHLRITDTTGTTDTLTFPIQVTRDGDGVPDTQDNCPTIANQDQTDTDHNGIGDACDP HTTRTPR Prediction of potential genes in microbial genomes Time: Thu Jul 21 05:20:30 2011 Seq name: gi|302034501|gb|GL383250.1| Propionibacterium acnes HL025PA2 genomic scaffold Scfld3, whole genome shotgun sequence Length of sequence - 285912 bp Number of predicted genes - 286, with homology - 273 Number of transcription units - 163, operones - 68 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 417 216 ## PPA2401 hypothetical protein 2 2 Op 1 . + CDS 475 - 975 233 ## PPA0553 GtrA family membrane protein 3 2 Op 2 . + CDS 1050 - 3038 1802 ## COG1297 Predicted membrane protein 4 3 Tu 1 . - CDS 3081 - 3944 781 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 5 4 Tu 1 . - CDS 4060 - 4692 572 ## COG0225 Peptide methionine sulfoxide reductase 6 5 Op 1 . + CDS 4849 - 6468 1328 ## COG0733 Na+-dependent transporters of the SNF family 7 5 Op 2 . + CDS 6465 - 6569 84 ## 8 6 Tu 1 . - CDS 6597 - 7313 282 ## COG0692 Uracil DNA glycosylase 9 7 Op 1 . + CDS 7382 - 8608 982 ## COG0628 Predicted permease 10 7 Op 2 . + CDS 8646 - 9629 676 ## PPA0560 hypothetical protein + Term 9650 - 9709 9.0 - Term 9638 - 9690 12.5 11 8 Op 1 . - CDS 9734 - 10240 626 ## COG0782 Transcription elongation factor 12 8 Op 2 . - CDS 10262 - 10687 240 ## HMPREF0675_3622 hypothetical protein 13 9 Tu 1 . + CDS 10714 - 10905 174 ## gi|289425798|ref|ZP_06427552.1| hypothetical protein HMPREF1034_1139 14 10 Tu 1 . - CDS 10875 - 11030 65 ## 15 11 Tu 1 . + CDS 10983 - 12998 1500 ## COG1331 Highly conserved protein containing a thioredoxin domain - Term 12966 - 13015 -0.5 16 12 Tu 1 . - CDS 13020 - 13841 675 ## COG0020 Undecaprenyl pyrophosphate synthase - Prom 13932 - 13991 1.8 17 13 Tu 1 . + CDS 13986 - 14657 578 ## COG1272 Predicted membrane protein, hemolysin III homolog 18 14 Op 1 . + CDS 14774 - 16153 1112 ## COG1875 Predicted ATPase related to phosphate starvation-inducible protein PhoH 19 14 Op 2 . + CDS 16233 - 16748 309 ## HMPREF0675_3627 hypothetical protein 20 15 Op 1 14/0.000 - CDS 16775 - 17011 274 ## COG1722 Exonuclease VII small subunit 21 15 Op 2 . - CDS 17008 - 18255 742 ## COG1570 Exonuclease VII, large subunit - Term 18277 - 18322 6.2 22 15 Op 3 . - CDS 18336 - 21113 2124 ## COG3391 Uncharacterized conserved protein + Prom 21127 - 21186 2.2 23 16 Tu 1 . + CDS 21263 - 22234 403 ## PROTEIN SUPPORTED gi|229229955|ref|ZP_04354520.1| SSU ribosomal protein S1P; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 24 17 Tu 1 . - CDS 22238 - 23458 875 ## COG1322 Uncharacterized protein conserved in bacteria 25 18 Tu 1 . + CDS 23537 - 24823 869 ## COG1362 Aspartyl aminopeptidase + Term 24896 - 24942 -0.3 26 19 Tu 1 . + CDS 24972 - 26045 1173 ## COG0012 Predicted GTPase, probable translation factor 27 20 Tu 1 . + CDS 26338 - 26913 349 ## PPA0576 hypothetical protein 28 21 Op 1 . - CDS 26991 - 27458 438 ## HMPREF0675_3637 hypothetical protein 29 21 Op 2 . - CDS 27521 - 28702 740 ## COG0738 Fucose permease 30 22 Tu 1 . + CDS 28697 - 28894 101 ## 31 23 Tu 1 . - CDS 28814 - 29341 346 ## COG1846 Transcriptional regulators + Prom 29252 - 29311 2.2 32 24 Tu 1 . + CDS 29366 - 29794 471 ## COG1764 Predicted redox protein, regulator of disulfide bond formation 33 25 Tu 1 . + CDS 29914 - 30603 535 ## COG0693 Putative intracellular protease/amidase + Term 30666 - 30706 -0.5 34 26 Tu 1 . - CDS 30967 - 31326 104 ## + Prom 31178 - 31237 2.2 35 27 Tu 1 3/0.053 + CDS 31319 - 32875 1328 ## COG0531 Amino acid transporters + Prom 32893 - 32952 3.4 36 28 Op 1 7/0.000 + CDS 33006 - 34250 511 ## PROTEIN SUPPORTED gi|149002994|ref|ZP_01827905.1| 50S ribosomal protein L33 37 28 Op 2 8/0.000 + CDS 34324 - 35328 839 ## COG0078 Ornithine carbamoyltransferase 38 28 Op 3 . + CDS 35349 - 36254 636 ## COG0549 Carbamate kinase + Term 36429 - 36470 1.0 + Prom 36458 - 36517 1.9 39 29 Tu 1 . + CDS 36641 - 36934 147 ## COG1438 Arginine repressor + Term 36939 - 36971 -0.2 40 30 Op 1 . + CDS 37116 - 37778 231 ## COG1990 Uncharacterized conserved protein 41 30 Op 2 . + CDS 37802 - 38320 486 ## COG2716 Glycine cleavage system regulatory protein 42 30 Op 3 . + CDS 38346 - 39314 735 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 43 30 Op 4 . + CDS 39367 - 39870 407 ## COG2077 Peroxiredoxin + Term 39887 - 39930 7.5 + Prom 39929 - 39988 1.5 44 31 Op 1 . + CDS 40031 - 41455 1094 ## COG0833 Amino acid transporters 45 31 Op 2 . + CDS 41500 - 42735 750 ## COG0366 Glycosidases 46 32 Tu 1 . - CDS 42760 - 43926 1159 ## COG1004 Predicted UDP-glucose 6-dehydrogenase 47 33 Op 1 . - CDS 44070 - 44642 413 ## PPA0594 putative lysophospholipase (EC:3.1.1.5) 48 33 Op 2 . - CDS 44654 - 44995 248 ## COG2267 Lysophospholipase - Prom 45030 - 45089 1.6 49 34 Tu 1 . + CDS 44946 - 45107 107 ## + Term 45296 - 45343 -0.8 50 35 Tu 1 . - CDS 45125 - 45325 101 ## - Prom 45524 - 45583 2.7 51 36 Op 1 7/0.000 + CDS 45541 - 47451 1957 ## COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit 52 36 Op 2 6/0.026 + CDS 47448 - 49637 2112 ## COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit 53 37 Op 1 . + CDS 49791 - 50837 945 ## COG1703 Putative periplasmic protein kinase ArgK and related GTPases of G3E family + Prom 50966 - 51025 2.8 54 37 Op 2 . + CDS 51059 - 52531 1020 ## COG1404 Subtilisin-like serine proteases + Term 52550 - 52603 12.2 55 38 Op 1 . - CDS 52611 - 52826 137 ## COG2501 Uncharacterized conserved protein 56 38 Op 2 34/0.000 - CDS 52872 - 53633 608 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 57 38 Op 3 . - CDS 53669 - 54217 366 ## COG0765 ABC-type amino acid transport system, permease component 58 38 Op 4 . - CDS 54263 - 54595 117 ## HMPREF0675_3667 hypothetical protein 59 38 Op 5 . - CDS 54644 - 55642 512 ## COG1609 Transcriptional regulators - Prom 55704 - 55763 1.6 60 39 Op 1 . + CDS 55702 - 55905 83 ## gi|289426729|ref|ZP_06428457.1| conserved hypothetical protein 61 39 Op 2 . + CDS 55859 - 57079 417 ## COG1653 ABC-type sugar transport system, periplasmic component 62 40 Op 1 . + CDS 57215 - 57490 217 ## PPA2403 hypothetical protein 63 40 Op 2 38/0.000 + CDS 57532 - 58011 339 ## COG1175 ABC-type sugar transport systems, permease components 64 40 Op 3 . + CDS 58039 - 58929 629 ## COG0395 ABC-type sugar transport system, permease component 65 40 Op 4 1/0.132 + CDS 59014 - 60384 1170 ## COG3669 Alpha-L-fucosidase 66 41 Op 1 . + CDS 60532 - 61107 292 ## COG2407 L-fucose isomerase and related proteins 67 41 Op 2 . + CDS 60990 - 62045 731 ## COG2407 L-fucose isomerase and related proteins 68 42 Tu 1 . + CDS 62153 - 62449 280 ## HMPREF0675_3676 hypothetical protein + Term 62458 - 62492 3.3 69 43 Tu 1 . - CDS 62412 - 62807 129 ## PPA0611 hypothetical protein + Prom 62755 - 62814 1.8 70 44 Op 1 . + CDS 62916 - 63599 275 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 71 44 Op 2 . + CDS 63668 - 65770 965 ## PPA0613 putative permease 72 44 Op 3 . + CDS 65867 - 66070 67 ## PPA0614 hypothetical protein + Term 66087 - 66125 6.0 73 45 Op 1 42/0.000 - CDS 66128 - 66982 838 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 74 45 Op 2 25/0.000 - CDS 66997 - 67800 218 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 75 45 Op 3 . - CDS 67842 - 68759 977 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin 76 46 Op 1 . - CDS 68878 - 69429 323 ## COG1335 Amidases related to nicotinamidase 77 46 Op 2 . - CDS 69426 - 69983 529 ## HMPREF0675_3685 permease, cytosine/purine, uracil, thiamine, allantoin family 78 46 Op 3 . - CDS 69868 - 70890 674 ## COG1457 Purine-cytosine permease and related proteins 79 47 Tu 1 . + CDS 70980 - 74438 2570 ## COG1012 NAD-dependent aldehyde dehydrogenases 80 48 Tu 1 . - CDS 74469 - 75518 639 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases - Prom 75618 - 75677 2.4 81 49 Tu 1 . + CDS 75617 - 77368 1049 ## COG2376 Dihydroxyacetone kinase 82 50 Op 1 . - CDS 77359 - 77862 498 ## COG2236 Predicted phosphoribosyltransferases 83 50 Op 2 . - CDS 77952 - 78452 432 ## COG1247 Sortase and related acyltransferases 84 51 Tu 1 . + CDS 78397 - 78582 127 ## gi|313771526|gb|EFS37492.1| hypothetical protein HMPREF9574_02241 85 52 Op 1 17/0.000 + CDS 78699 - 80363 1401 ## COG3288 NAD/NADP transhydrogenase alpha subunit 86 52 Op 2 . + CDS 80367 - 81788 1469 ## COG1282 NAD/NADP transhydrogenase beta subunit 87 53 Op 1 4/0.026 + CDS 81934 - 82254 256 ## COG1146 Ferredoxin 88 53 Op 2 . + CDS 82251 - 83354 920 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase + Term 83555 - 83599 -0.5 89 54 Op 1 . - CDS 83355 - 84197 392 ## HMPREF0675_3696 hypothetical protein 90 54 Op 2 . - CDS 84295 - 85257 775 ## COG2171 Tetrahydrodipicolinate N-succinyltransferase 91 54 Op 3 . - CDS 85352 - 85771 93 ## PPA0631 hypothetical protein 92 55 Tu 1 . + CDS 85641 - 86768 1050 ## PPA0632 glycine amidinotransferase (EC:2.1.4.1) 93 56 Op 1 . + CDS 86892 - 87953 809 ## HMPREF0675_3700 hypothetical protein 94 56 Op 2 . + CDS 87969 - 89264 491 ## COG0477 Permeases of the major facilitator superfamily 95 57 Tu 1 . - CDS 89277 - 89768 315 ## HMPREF0675_3702 transcriptional regulator, TetR family 96 58 Op 1 . + CDS 90009 - 91088 609 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 97 58 Op 2 . + CDS 91133 - 91438 196 ## HMPREF0675_3704 DivIVA domain protein 98 58 Op 3 . + CDS 91479 - 91646 138 ## HMPREF0675_3705 hypothetical protein - Term 91648 - 91695 17.1 99 59 Tu 1 . - CDS 91710 - 92894 874 ## COG0438 Glycosyltransferase 100 60 Tu 1 . + CDS 93038 - 94264 1174 ## COG0448 ADP-glucose pyrophosphorylase + Term 94286 - 94332 14.1 - Term 94278 - 94316 8.3 101 61 Tu 1 . - CDS 94347 - 95000 605 ## COG4122 Predicted O-methyltransferase + Prom 94989 - 95048 1.9 102 62 Op 1 . + CDS 95070 - 95951 876 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase 103 62 Op 2 . + CDS 96002 - 96415 420 ## HMPREF0675_3710 putative twin arginine-targeting protein translocase TatB 104 63 Op 1 . - CDS 96568 - 98142 935 ## PPA0644 endoglycoceramidase (EC:3.2.1.123) 105 63 Op 2 1/0.132 - CDS 98198 - 99358 1012 ## COG0489 ATPases involved in chromosome partitioning 106 63 Op 3 3/0.053 - CDS 99420 - 99935 484 ## COG4420 Predicted membrane protein 107 63 Op 4 . - CDS 99928 - 101142 875 ## COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) - Prom 101194 - 101253 2.8 108 64 Op 1 . + CDS 100994 - 101299 79 ## 109 64 Op 2 . + CDS 101299 - 101808 526 ## HMPREF0675_3715 hypothetical protein 110 65 Tu 1 . + CDS 101922 - 102794 619 ## PPA0649 putative cytochrome oxidase assembly protein 111 66 Tu 1 . - CDS 102825 - 104321 1220 ## COG0006 Xaa-Pro aminopeptidase 112 67 Op 1 . - CDS 104615 - 105016 193 ## gi|332675061|gb|AEE71877.1| hypothetical protein PAZ_c06890 113 67 Op 2 . - CDS 105013 - 105186 86 ## gi|332675062|gb|AEE71878.1| hypothetical protein PAZ_c06900 114 68 Tu 1 . + CDS 105813 - 106583 624 ## COG1579 Zn-ribbon protein, possibly nucleic acid-binding 115 69 Op 1 . + CDS 107043 - 107333 69 ## gi|328752951|gb|EGF66567.1| hypothetical protein HMPREF9563_02204 116 69 Op 2 . + CDS 107364 - 107621 57 ## 117 69 Op 3 . + CDS 107688 - 107882 249 ## HMPREF0675_3720 hypothetical protein 118 69 Op 4 . + CDS 107879 - 108250 378 ## HMPREF0675_3721 hypothetical protein + Term 108360 - 108396 1.9 + Prom 108472 - 108531 3.1 119 70 Op 1 33/0.000 + CDS 108744 - 109757 885 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 120 70 Op 2 35/0.000 + CDS 109754 - 110788 582 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 121 70 Op 3 . + CDS 110785 - 111582 199 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 122 70 Op 4 . + CDS 111579 - 112199 291 ## HMPREF0675_3726 hypothetical protein + Term 112434 - 112470 1.9 123 71 Op 1 . - CDS 112234 - 112449 80 ## HMPREF0675_3727 hypothetical protein 124 71 Op 2 . - CDS 112446 - 113087 610 ## COG1966 Carbon starvation protein, predicted membrane protein 125 71 Op 3 . - CDS 112937 - 114715 1283 ## COG1966 Carbon starvation protein, predicted membrane protein 126 72 Tu 1 . + CDS 114918 - 115091 58 ## HMPREF0675_3729 hypothetical protein 127 73 Tu 1 . - CDS 115098 - 115952 542 ## COG0024 Methionine aminopeptidase - Prom 116013 - 116072 2.1 128 74 Tu 1 . - CDS 116356 - 117225 526 ## HMPREF0675_3732 hypothetical protein 129 75 Tu 1 . + CDS 117329 - 118630 989 ## COG0174 Glutamine synthetase - Term 118570 - 118616 -0.2 130 76 Tu 1 . - CDS 118649 - 119452 367 ## HMPREF0675_3733 hypothetical protein 131 77 Tu 1 . + CDS 119582 - 122533 1681 ## COG1391 Glutamine synthetase adenylyltransferase 132 78 Op 1 . - CDS 122527 - 123849 904 ## COG2966 Uncharacterized conserved protein 133 78 Op 2 . - CDS 123856 - 125037 640 ## COG0327 Uncharacterized conserved protein 134 79 Tu 1 . + CDS 125223 - 126287 386 ## COG1434 Uncharacterized conserved protein 135 80 Tu 1 . + CDS 126530 - 126937 175 ## HMPREF0675_3739 hypothetical protein 136 81 Tu 1 . - CDS 127019 - 128386 1237 ## COG0174 Glutamine synthetase + Prom 128117 - 128176 3.3 137 82 Op 1 . + CDS 128342 - 128527 88 ## 138 82 Op 2 . + CDS 128554 - 128976 331 ## PPA0672 hypothetical protein 139 82 Op 3 . + CDS 128991 - 130094 638 ## COG0438 Glycosyltransferase 140 82 Op 4 . + CDS 130118 - 130726 424 ## COG0586 Uncharacterized membrane-associated protein 141 83 Tu 1 . - CDS 130803 - 132191 1507 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific - Prom 132242 - 132301 1.8 142 84 Op 1 . + CDS 132367 - 133092 501 ## COG2188 Transcriptional regulators 143 84 Op 2 . + CDS 133089 - 133337 235 ## COG1264 Phosphotransferase system IIB components + Term 133346 - 133391 2.1 144 85 Op 1 3/0.053 + CDS 133467 - 133697 272 ## COG1264 Phosphotransferase system IIB components 145 85 Op 2 . + CDS 133697 - 134191 439 ## COG2190 Phosphotransferase system IIA components 146 85 Op 3 . + CDS 134169 - 134726 433 ## COG3477 Predicted periplasmic/secreted protein 147 86 Tu 1 . - CDS 134674 - 135738 695 ## PPA0681 hypothetical protein 148 87 Op 1 . - CDS 135840 - 137645 1371 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains 149 87 Op 2 . - CDS 137653 - 138423 729 ## PPA0683 hypothetical protein - Term 138554 - 138586 -1.0 150 88 Tu 1 . - CDS 138625 - 139143 204 ## PPA0684 sialidase B (EC:3.2.1.18) 151 89 Tu 1 . - CDS 139348 - 140142 465 ## HMPREF0675_3753 BNR/Asp-box repeat protein 152 90 Tu 1 . + CDS 140111 - 140329 128 ## 153 91 Op 1 . - CDS 140391 - 142706 1185 ## COG4409 Neuraminidase (sialidase) 154 91 Op 2 . - CDS 142779 - 144311 925 ## COG0477 Permeases of the major facilitator superfamily - Prom 144357 - 144416 3.2 + Prom 144241 - 144300 2.4 155 92 Tu 1 . + CDS 144522 - 144923 121 ## PPA2405 hypothetical protein + Term 144947 - 145002 23.4 156 93 Tu 1 . - CDS 145020 - 145823 751 ## HMPREF0675_3756 CAMP factor (Cfa) 157 94 Tu 1 . + CDS 146388 - 146696 158 ## gi|313763865|gb|EFS35229.1| hypothetical protein HMPREF9567_01664 + Term 146740 - 146778 -0.5 158 95 Tu 1 . - CDS 147185 - 148075 700 ## COG0320 Lipoate synthase 159 96 Tu 1 . + CDS 148022 - 148231 91 ## + Term 148289 - 148326 -0.9 160 97 Op 1 . - CDS 148188 - 150431 1681 ## COG2217 Cation transport ATPase 161 97 Op 2 . - CDS 150428 - 152305 1233 ## COG3336 Predicted membrane protein 162 98 Tu 1 . - CDS 152421 - 153185 595 ## COG0321 Lipoate-protein ligase B - Prom 153236 - 153295 1.9 - Term 153315 - 153358 14.3 163 99 Op 1 . - CDS 153413 - 155146 1911 ## COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes 164 99 Op 2 . - CDS 155307 - 156833 1324 ## COG0260 Leucyl aminopeptidase 165 100 Tu 1 . + CDS 156868 - 157347 322 ## PPA0695 hypothetical protein + Term 157356 - 157388 -0.9 166 101 Op 1 . - CDS 157317 - 157535 242 ## HMPREF0675_3765 hypothetical protein 167 101 Op 2 . - CDS 157579 - 158334 547 ## HMPREF0675_3766 hypothetical protein - Prom 158405 - 158464 1.6 + Prom 158405 - 158464 1.7 168 102 Op 1 . + CDS 158533 - 159336 788 ## COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription 169 102 Op 2 . + CDS 159333 - 159623 392 ## HMPREF0675_3768 hypothetical protein 170 102 Op 3 . + CDS 159794 - 160147 355 ## COG0316 Uncharacterized conserved protein + Term 160198 - 160251 14.7 171 103 Op 1 25/0.000 + CDS 160523 - 161236 732 ## COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2 172 103 Op 2 . + CDS 161233 - 162951 1634 ## COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1 173 103 Op 3 . + CDS 162951 - 163346 505 ## HMPREF0675_3772 hypothetical protein + Term 163348 - 163401 7.5 - Term 163104 - 163159 4.0 174 104 Op 1 . - CDS 163398 - 165836 839 ## PPA0704 hypothetical protein 175 104 Op 2 . - CDS 165833 - 166507 240 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) - Prom 166589 - 166648 80.3 176 105 Tu 1 . - CDS 166665 - 166886 165 ## gi|289426867|ref|ZP_06428593.1| conserved hypothetical protein - Prom 166933 - 166992 1.6 177 106 Tu 1 . - CDS 167133 - 167420 149 ## gi|314979285|gb|EFT23379.1| hypothetical protein HMPREF9573_01382 178 107 Op 1 . - CDS 167946 - 168602 556 ## COG0702 Predicted nucleoside-diphosphate-sugar epimerases 179 107 Op 2 . - CDS 168667 - 170148 867 ## COG0516 IMP dehydrogenase/GMP reductase + Prom 170038 - 170097 1.6 180 108 Tu 1 . + CDS 170187 - 170504 181 ## COG3695 Predicted methylated DNA-protein cysteine methyltransferase + Term 170603 - 170647 -0.5 181 109 Op 1 28/0.000 - CDS 170553 - 172232 1449 ## COG1290 Cytochrome b subunit of the bc complex 182 109 Op 2 4/0.026 - CDS 172232 - 173314 777 ## COG0723 Rieske Fe-S protein 183 109 Op 3 4/0.026 - CDS 173281 - 174084 548 ## COG2010 Cytochrome c, mono- and diheme variants 184 109 Op 4 . - CDS 174116 - 174709 551 ## COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3 - Prom 174811 - 174870 2.9 + Prom 174852 - 174911 2.0 185 110 Tu 1 . + CDS 175056 - 175487 388 ## COG0784 FOG: CheY-like receiver 186 111 Tu 1 . + CDS 175635 - 175784 91 ## HMPREF0675_3784 hypothetical protein 187 112 Op 1 . - CDS 175771 - 176481 417 ## HMPREF0675_3785 hypothetical protein 188 112 Op 2 . - CDS 176491 - 176970 298 ## PPA0716 hypothetical protein - Term 177194 - 177227 -0.9 189 113 Tu 1 . - CDS 177330 - 178577 1034 ## HMPREF0675_3787 hypothetical protein 190 114 Tu 1 . + CDS 178629 - 179141 551 ## COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family + Prom 179157 - 179216 1.6 191 115 Tu 1 . + CDS 179259 - 179903 447 ## PPA0719 hypothetical protein 192 116 Tu 1 . - CDS 179823 - 181586 776 ## COG0322 Nuclease subunit of the excinuclease complex 193 117 Op 1 . + CDS 181874 - 183031 189 ## PROTEIN SUPPORTED gi|167856514|ref|ZP_02479226.1| 50S ribosomal protein L1 194 117 Op 2 . + CDS 183038 - 184108 427 ## PROTEIN SUPPORTED gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 195 118 Tu 1 . - CDS 184113 - 184520 202 ## HMPREF0675_3792 hypothetical protein 196 119 Op 1 . + CDS 184580 - 185335 617 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase 197 119 Op 2 . + CDS 185340 - 186059 354 ## HMPREF0675_3794 hypothetical protein 198 119 Op 3 . + CDS 186157 - 187551 1049 ## COG3200 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 199 120 Tu 1 . + CDS 187655 - 188302 452 ## COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold 200 121 Op 1 . - CDS 188318 - 189226 945 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Term 189266 - 189317 -0.4 201 121 Op 2 . - CDS 189324 - 190742 771 ## COG0515 Serine/threonine protein kinase 202 122 Op 1 . + CDS 190863 - 191306 217 ## COG4290 Guanyl-specific ribonuclease Sa 203 122 Op 2 . + CDS 191303 - 191701 390 ## HMPREF0675_3800 hypothetical protein 204 123 Tu 1 . - CDS 191726 - 192823 646 ## COG0142 Geranylgeranyl pyrophosphate synthase 205 124 Tu 1 . + CDS 193041 - 193370 249 ## COG0685 5,10-methylenetetrahydrofolate reductase + Term 193492 - 193525 2.1 206 125 Op 1 . - CDS 193424 - 195685 1420 ## COG3973 Superfamily I DNA and RNA helicases 207 125 Op 2 . - CDS 195732 - 197063 331 ## PPA0734 putative carotenoid dehydrogenase 208 126 Tu 1 . + CDS 196884 - 197678 398 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) + Prom 197684 - 197743 4.0 209 127 Tu 1 . + CDS 197799 - 198257 535 ## COG0071 Molecular chaperone (small heat shock protein) 210 128 Tu 1 . - CDS 198330 - 198971 650 ## COG2610 H+/gluconate symporter and related permeases 211 129 Tu 1 . + CDS 199205 - 199444 253 ## HMPREF0675_3808 hypothetical protein + Term 199573 - 199611 -0.9 + Prom 199446 - 199505 4.6 212 130 Tu 1 . + CDS 199615 - 200334 583 ## COG2186 Transcriptional regulators + Term 200491 - 200541 5.4 - Term 200336 - 200391 22.0 213 131 Op 1 12/0.000 - CDS 200399 - 203383 1901 ## COG1003 Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain 214 131 Op 2 18/0.000 - CDS 203389 - 203760 472 ## COG0509 Glycine cleavage system H protein (lipoate-binding) 215 131 Op 3 . - CDS 203801 - 204835 887 ## COG0404 Glycine cleavage system T protein (aminomethyltransferase) 216 132 Tu 1 . + CDS 205043 - 205471 216 ## HMPREF0675_3813 hypothetical protein 217 133 Op 1 . - CDS 205498 - 207750 1163 ## COG1305 Transglutaminase-like enzymes, putative cysteine proteases 218 133 Op 2 . - CDS 207708 - 208709 591 ## HMPREF0675_3815 hypothetical protein 219 134 Tu 1 . - CDS 208931 - 209974 564 ## COG0714 MoxR-like ATPases 220 135 Op 1 29/0.000 + CDS 210250 - 210678 447 ## COG2001 Uncharacterized protein conserved in bacteria 221 135 Op 2 . + CDS 210827 - 211834 715 ## COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis 222 135 Op 3 . + CDS 211831 - 212295 459 ## HMPREF0675_3819 putative cell division protein FtsL 223 136 Op 1 26/0.000 + CDS 212430 - 214217 1235 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 224 136 Op 2 26/0.000 + CDS 214214 - 215803 1214 ## COG0769 UDP-N-acetylmuramyl tripeptide synthase 225 136 Op 3 28/0.000 + CDS 215800 - 217257 902 ## COG0770 UDP-N-acetylmuramyl pentapeptide synthase 226 136 Op 4 28/0.000 + CDS 217254 - 218324 949 ## COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 227 136 Op 5 25/0.000 + CDS 218306 - 219802 1042 ## COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase 228 136 Op 6 31/0.000 + CDS 219762 - 221084 832 ## COG0772 Bacterial cell division membrane protein 229 136 Op 7 26/0.000 + CDS 221127 - 222245 734 ## COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase 230 136 Op 8 5/0.026 + CDS 222257 - 223672 1021 ## COG0773 UDP-N-acetylmuramate-alanine ligase 231 136 Op 9 6/0.026 + CDS 223672 - 224385 239 ## PROTEIN SUPPORTED gi|88856514|ref|ZP_01131171.1| 50S ribosomal protein L6 232 137 Op 1 5/0.026 + CDS 224508 - 225761 970 ## COG0206 Cell division GTPase 233 137 Op 2 . + CDS 225763 - 226548 414 ## COG1496 Uncharacterized conserved protein 234 138 Op 1 . + CDS 226675 - 227193 577 ## COG1799 Uncharacterized protein conserved in bacteria 235 138 Op 2 . + CDS 227204 - 227494 292 ## HMPREF0675_3832 YGGT family protein 236 138 Op 3 . + CDS 227647 - 228732 1010 ## PPA0765 putative immunogenic protein antigen 84 + Term 228753 - 228800 13.0 + Prom 228843 - 228902 1.9 237 139 Op 1 . + CDS 228953 - 229375 333 ## HMPREF0675_3834 C4-type zinc finger protein, DksA/TraR family 238 139 Op 2 15/0.000 + CDS 229429 - 229887 262 ## COG0597 Lipoprotein signal peptidase 239 139 Op 3 . + CDS 229929 - 230849 504 ## COG0564 Pseudouridylate synthases, 23S RNA-specific 240 139 Op 4 . + CDS 231024 - 232400 1422 ## COG0469 Pyruvate kinase + Term 232424 - 232466 11.7 241 140 Op 1 . + CDS 232682 - 233113 182 ## PROTEIN SUPPORTED gi|148985194|ref|ZP_01818433.1| 50S ribosomal protein L19 242 140 Op 2 . + CDS 233116 - 233481 271 ## HMPREF0675_3839 putative CrcB protein - TRNA 233487 - 233572 66.0 # Leu CAA 0 0 243 141 Tu 1 . + CDS 233735 - 234382 705 ## COG3707 Response regulator with putative antiterminator output domain + Term 234445 - 234487 7.1 244 142 Tu 1 . - CDS 234402 - 234815 201 ## COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism 245 143 Tu 1 . + CDS 234818 - 237565 2392 ## COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains 246 144 Op 1 15/0.000 - CDS 237728 - 238426 271 ## PROTEIN SUPPORTED gi|167010850|ref|ZP_02275781.1| ribosomal protein L36, putative 247 144 Op 2 . - CDS 238366 - 240570 1127 ## COG0277 FAD/FMN-containing dehydrogenases 248 144 Op 3 . - CDS 240650 - 241426 592 ## HMPREF0675_3846 sortase family protein 249 145 Tu 1 . + CDS 241751 - 243247 2531 ## PROTEIN SUPPORTED gi|50842265|ref|YP_055492.1| 30S ribosomal protein S1 + Term 243269 - 243313 16.0 250 146 Tu 1 . + CDS 243468 - 244871 950 ## HMPREF0675_3848 HtaA 251 147 Op 1 8/0.000 + CDS 244984 - 246096 635 ## COG4558 ABC-type hemin transport system, periplasmic component 252 147 Op 2 10/0.000 + CDS 246093 - 247154 753 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 253 147 Op 3 . + CDS 247151 - 247930 203 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 254 147 Op 4 14/0.000 + CDS 247933 - 249663 214 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 255 147 Op 5 . + CDS 249660 - 251330 1069 ## COG4987 ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components 256 147 Op 6 . + CDS 251359 - 252066 457 ## COG0237 Dephospho-CoA kinase 257 147 Op 7 . + CDS 252139 - 252351 74 ## 258 147 Op 8 . + CDS 252584 - 254155 823 ## HMPREF0675_3857 HtaA + Term 254178 - 254243 11.1 259 148 Op 1 4/0.026 - CDS 254615 - 255595 596 ## COG1239 Mg-chelatase subunit ChlI 260 148 Op 2 . - CDS 255597 - 257318 219 ## COG1240 Mg-chelatase subunit ChlD 261 148 Op 3 . - CDS 257399 - 257932 469 ## HMPREF0675_3860 hypothetical protein 262 148 Op 4 . - CDS 257968 - 261801 2187 ## COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatases 263 148 Op 5 35/0.000 - CDS 261798 - 262607 234 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 264 148 Op 6 33/0.000 - CDS 262609 - 263538 449 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 265 148 Op 7 . - CDS 263649 - 264662 476 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component - Prom 264796 - 264855 2.1 + Prom 264472 - 264531 4.2 266 149 Tu 1 . + CDS 264580 - 264819 103 ## PPA2406 hypothetical protein 267 150 Tu 1 . + CDS 265055 - 265405 226 ## PPA0784 ABC-type transport system, fused ATPase and permease + Term 265432 - 265492 2.5 268 151 Op 1 . - CDS 265754 - 266062 198 ## COG1136 ABC-type antimicrobial peptide transport system, ATPase component 269 151 Op 2 . - CDS 266076 - 266378 153 ## PPA0798 putative permease - Term 266406 - 266451 -0.7 270 152 Tu 1 . - CDS 266608 - 267414 200 ## HMPREF0675_3868 hypothetical protein + Prom 267356 - 267415 1.8 271 153 Tu 1 . + CDS 267545 - 267784 89 ## gi|314925323|gb|EFS89154.1| hypothetical protein HMPREF9606_01686 272 154 Tu 1 . - CDS 268191 - 268535 251 ## PPA0802 hypothetical protein + Prom 268363 - 268422 1.8 273 155 Tu 1 . + CDS 268647 - 270752 1946 ## COG0556 Helicase subunit of the DNA excision repair complex 274 156 Tu 1 . + CDS 270946 - 271935 905 ## COG0861 Membrane protein TerC, possibly involved in tellurium resistance + Term 272030 - 272064 0.3 275 157 Op 1 . - CDS 271944 - 272600 441 ## COG0491 Zn-dependent hydrolases, including glyoxylases 276 157 Op 2 . - CDS 272646 - 273389 489 ## HMPREF0675_3873 hypothetical protein - Prom 273441 - 273500 2.2 + Prom 273405 - 273464 2.8 277 158 Tu 1 . + CDS 273540 - 276500 1824 ## COG0178 Excinuclease ATPase subunit 278 159 Op 1 . - CDS 276515 - 276922 388 ## COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 279 159 Op 2 . - CDS 276938 - 277684 543 ## COG0406 Fructose-2,6-bisphosphatase 280 160 Tu 1 . + CDS 277861 - 279510 501 ## HMPREF0675_3876 hypothetical protein 281 161 Tu 1 . - CDS 279383 - 279619 70 ## - Prom 279799 - 279858 1.6 282 162 Op 1 5/0.026 + CDS 279703 - 281721 1688 ## COG0322 Nuclease subunit of the excinuclease complex 283 162 Op 2 12/0.000 + CDS 281738 - 282613 618 ## COG1660 Predicted P-loop-containing kinase 284 162 Op 3 12/0.000 + CDS 282616 - 283578 649 ## COG0391 Uncharacterized conserved protein 285 162 Op 4 1/0.132 + CDS 283635 - 284624 488 ## COG1481 Uncharacterized protein conserved in bacteria + Term 284762 - 284803 1.4 + Prom 284753 - 284812 2.7 286 163 Tu 1 . + CDS 284858 - 285865 1126 ## COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Predicted protein(s) >gi|302034501|gb|GL383250.1| GENE 1 3 - 417 216 138 aa, chain - ## HITS:1 COG:no KEGG:PPA2401 NR:ns ## KEGG: PPA2401 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 138 1 138 165 274 100.0 8e-73 MATTRRATPADLPFMVHVLRHAAGGTSGPLDVEECRTNPAIAHYIDGWTPDQVGLICLVD DTPVGAAWVRNLPASDPGYGFVAPGIPELVIAISPHHREQGLGGYLLESLLDTCSANGIK SVSLSVGVGVGWLVRVCR >gi|302034501|gb|GL383250.1| GENE 2 475 - 975 233 166 aa, chain + ## HITS:1 COG:no KEGG:PPA0553 NR:ns ## KEGG: PPA0553 # Name: not_defined # Def: GtrA family membrane protein # Organism: P.acnes # Pathway: not_defined # 27 166 1 143 143 228 96.0 7e-59 MVTSARRIRARKVPRRSVPRAFARGCLTVHSVLPFPLSGLPVTFIGYCIINGLGFLIELA VFFRGVGLPYPVSVSLGYGLSAVYSFVVNRWLNFHSHGNLGRQSGRYVVTMVTNYVCLTL GLSSLLESLGVHFELARFTAACVEGLYVYLMLSIWVFPKSGRRQLA >gi|302034501|gb|GL383250.1| GENE 3 1050 - 3038 1802 662 aa, chain + ## HITS:1 COG:MT2465 KEGG:ns NR:ns ## COG: MT2465 COG1297 # Protein_GI_number: 15841909 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Mycobacterium tuberculosis CDC1551 # 19 662 9 654 667 622 59.0 1e-177 MSDLSSSSAPARRPGTSVRELTFRGIVLGGLMTLIFTAANVYLGLKVGLTFATSIPAAVI SMAVLRHFKGHSVEENNIVQTIASAAGTLSAIIFVLPGLIMVGWWSGFPYWTTLAICLVG GILGVMYSIPLRRALVTGSDLPYPEGVAGAEVLKVGDSAGAAEANKVGLRVIIVGSVVSA AYALLSDLKLVKSALTKPFKTGDSSGSMVGVSMSMALIGVGHLVGIAVAAAILVGLFISY GAILPWRVSGKVGSDLTVIQDVFTSDVRFVGAGTIGVAAIWTLVKVIGPIVKGISDSISS SKTRHEGGEVPLTERDLPVSVVLTVVLISMIPIGFMLWGFARDMVVSRSMTGVIIVSLAF ILLVGLAVASVCGYMAGLIGASNSPISGVGILVVLVAALLIKLTYGAVGGGETVKLVAYT LFTASIVFGIATISNDNLQDLKTGQLVGSTPWKQQIALIIGVIFGSAIIPPVMQLMQSAF GFQGAPGAGPNALQAPQATLISSLATGVFGGALDWGLMGIGALVGIGVIVVDEILTHTTK KFSLPPLAVGMGMYLPMTLSLTIPIGAALGWLFDKWAAHTAGDVEGKKRTGILLATGLIV GESIFGVIYAAMIAAAGSEDAIAIAPESWDSGAGIVGVITFAAAIAFLYRWTKRQAKERV EA >gi|302034501|gb|GL383250.1| GENE 4 3081 - 3944 781 287 aa, chain - ## HITS:1 COG:all2316 KEGG:ns NR:ns ## COG: all2316 COG0667 # Protein_GI_number: 17229808 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Nostoc sp. PCC 7120 # 12 286 14 284 284 177 37.0 2e-44 MKYRQIGPFRTSAIAYGSMPLSIEGRPDRETAINILHDVLDAGCTHIDTAWAYYESGGVE QYGERLVTDALASWDGDHSTISVATKVGHFRCFNDAGQPVWDVDGSPERLRRDAKLSAEA LRTDQIDLLYLHRPDPKVEYEGMVRTLAGILDDGLARTAGISNANPDQIRLAHSILGDRL VAVQNQFSPGFLSSRPELELCGELGLAFVAWSPLGGYRRPLDEDAFAAFQRIADARGISR AQVILAWELSKGPHVIPIPGSHRSQTILDSLRSVDVTLNDEELAQLP >gi|302034501|gb|GL383250.1| GENE 5 4060 - 4692 572 210 aa, chain - ## HITS:1 COG:AGc197 KEGG:ns NR:ns ## COG: AGc197 COG0225 # Protein_GI_number: 15887479 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptide methionine sulfoxide reductase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 3 205 22 223 228 204 56.0 8e-53 MNKTEMVSSENALPGGHTPVLAMPFFHRVTGDRLDRPFPSSETIYLAMGCFWGAEKLFWN TDGVLQTAVGYMGGLTPNPTYREVYTGCTGHAETVRVTYDPTQVSTEAILTIFLENHDPT QGMRQGNDVGTQYRSAIWCTTTEQFMTATTVKGSYQANLLNAGYGAITTAISMANGVEFY LAEAEHQQYLEDNPFGYCPVHATGVCLAGS >gi|302034501|gb|GL383250.1| GENE 6 4849 - 6468 1328 539 aa, chain + ## HITS:1 COG:PM0718 KEGG:ns NR:ns ## COG: PM0718 COG0733 # Protein_GI_number: 15602583 # Func_class: R General function prediction only # Function: Na+-dependent transporters of the SNF family # Organism: Pasteurella multocida # 18 511 2 493 502 516 60.0 1e-146 MSDPAQSGATVAGGGRATRKPQRRESFAGRGAFLIAAIGSAVGLGNIWRFPYVAYSNGGG AFIVPYLVALLTAGIPLLFLDYAVGHKFRGSPPMALRRLHRRMEAIGWWQTLICWVIVIY YAVIIAWAIRYVGFSVTKTWGHDPEGFLTGSFLHVASNVDVEFHFVSGVFWPLLLLWLFV LAIMATGVEKGITRASWIFMPLLAVMFITLVIVALTLDGASVGLNALFTPSWGALGNYRV WMAAYGQIFFSLSVGFGIMVTYASYLKPKSDLTGSGLVVGFANSSFEILAGLGVFAALGF MATASGKPVSEVAGSGIGLAFIAFPQIISQAGAVGPILGVLFFVSLVFAGITSMISLLEV VIAAFREKTGISRKAATWIIGGVTAIASIVLFPTTTGLNLLDVTDHFINNIGIVGVALLA CLVISWALRKLPVLRDHLNEYSSFQVNKVWMALVSVVAPLVLLSLWITEIITVASKGYGE MPRNFVGIFGWGMSILLVVLAIVLSLIPWPHRSAIHHELTHEEELACENFQETEEGALS >gi|302034501|gb|GL383250.1| GENE 7 6465 - 6569 84 34 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSTSAIIMMISAMVTVWGGLAASAISLFRHPEQD >gi|302034501|gb|GL383250.1| GENE 8 6597 - 7313 282 238 aa, chain - ## HITS:1 COG:ML1675 KEGG:ns NR:ns ## COG: ML1675 COG0692 # Protein_GI_number: 15827886 # Func_class: L Replication, recombination and repair # Function: Uracil DNA glycosylase # Organism: Mycobacterium leprae # 12 235 1 226 227 267 62.0 1e-71 MSSVCILLEATVVAHPVAELVTPDWAEALTGVEPRIHEMGDFLRAETAAGRGFLPHGDRI LRAFSRPMADVRVLIVGQDPYPTPGHPVGLSFSVERDVRPLPRSLQNIYTELQSDLGIAP CEHGDLTGWFEQGVLLLNRCLTVQPGRPASHRGKGWEEVTQTAIEALVARGGPLVAILWG RDAQSLEPMLGKVPIVKSSHPSPMSARYGFFGSRPFSRTNELLVQQGADPINWDLSSH >gi|302034501|gb|GL383250.1| GENE 9 7382 - 8608 982 408 aa, chain + ## HITS:1 COG:MT0215 KEGG:ns NR:ns ## COG: MT0215 COG0628 # Protein_GI_number: 15839585 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Mycobacterium tuberculosis CDC1551 # 54 400 14 363 367 171 34.0 2e-42 MKLFSSGRKTPTSSPASSHAGAMDETVGVTSTSEAANVATQPVPTPVEDVPNGVRTAAGW CWRMIVIAAFIYGLYQVLHAASEVSVPVAVALMLTAAMWPLANWLSRHHIHRGIASGICL LLLVILVGGVFTLVGAQIALQWRQLGDQSVASFKQALQWLAKSPLHTNEAQLTHLMQKAE AAMAGSQGRIASTAAAAGSQIGRFGAGLVMALFATFFFVYEGDKLAEKSAVLIPREHRAA ILDAAKRGWVALVAYVRAAVIVAFVDGLGAGIGAAIIGSSMSVAIGALTFILAFVPIVGA LTAGVVAVGVVLVTLGFFKAFIMLIVFVAVMQIEGHVLQPFLLGKAVSIHPLIVLLGIAV GAIISGIVGALFAIPIVAFGVAFIKALNPETPANEVPPNHDDLAAEHT >gi|302034501|gb|GL383250.1| GENE 10 8646 - 9629 676 327 aa, chain + ## HITS:1 COG:no KEGG:PPA0560 NR:ns ## KEGG: PPA0560 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 327 1 327 327 548 99.0 1e-155 MSADITAILEDLAAGRIDTAEASRRIAAAGQDQPTSGVTSGPDCGPGPRHGASEDDAPGA DSSSLGGFTIPSEAKEGLRSAWRVVSGMAESVGETVASTVSSGSRRASGGNDSERSVDMT TDLDRVRINCSGRRIRLIGDRSIPGVQIGGKHTRRRIGRVVEIGIDGHLAPDLGVLKRFR FPTGMDGVKDLSFGREVTVRVHPDLPVDIELSGGSLRASGVERFGRVRVTAGVTEIDGVH QIEDGLFQAGSGSITGRIDTGRSQIRVESGNLNIKLAGGSNVSVRGKAQTGMISWPEGGE VDEYVMGNGSARLDLTCLVGRIAVRAL >gi|302034501|gb|GL383250.1| GENE 11 9734 - 10240 626 168 aa, chain - ## HITS:1 COG:ML2393 KEGG:ns NR:ns ## COG: ML2393 COG0782 # Protein_GI_number: 15828286 # Func_class: K Transcription # Function: Transcription elongation factor # Organism: Mycobacterium leprae # 9 166 8 162 164 150 54.0 1e-36 MPESEDTVWLTQEAFDKLTQELEYLKGEGRTAIANKIADARSEGDLSENGGYHAAREEQG QAEARIRQLEQMLRNAEVGEAPSSPDEVVPGSKVTVCYFDDESDTDTFLLGSRQVMGLDD SVNVSVYSPQSPLGGAILGHSKGESTEYQAPNGKTIKVTILNVEPFEE >gi|302034501|gb|GL383250.1| GENE 12 10262 - 10687 240 141 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3622 NR:ns ## KEGG: HMPREF0675_3622 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 141 1 141 141 262 100.0 4e-69 MGHVPTPDHSLTDEARERIANRYPSPRRAPWVVLIIVLAVILIGWTVWTGLYHADQPIRA SLHGYQAVSDSRVDVTIKLHRPDPSVAGSCTLVATGADHVRVGETTVTFPASSSQDETIR ASVKTFSRAVTADLEKCGPIR >gi|302034501|gb|GL383250.1| GENE 13 10714 - 10905 174 63 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|289425798|ref|ZP_06427552.1| ## NR: gi|289425798|ref|ZP_06427552.1| hypothetical protein HMPREF1034_1139 [Propionibacterium acnes SK187] hypothetical protein HMPREF1034_1139 [Propionibacterium acnes SK187] hypothetical protein HMPREF9567_01808 [Propionibacterium acnes HL013PA1] hypothetical protein HMPREF9574_02176 [Propionibacterium acnes HL074PA1] hypothetical protein HMPREF9575_02638 [Propionibacterium acnes HL110PA1] hypothetical protein HMPREF9576_01196 [Propionibacterium acnes HL110PA2] hypothetical protein HMPREF9580_00569 [Propionibacterium acnes HL087PA2] hypothetical protein HMPREF9585_00876 [Propionibacterium acnes HL083PA1] hypothetical protein HMPREF9587_02235 [Propionibacterium acnes HL025PA1] hypothetical protein HMPREF9589_02265 [Propionibacterium acnes HL059PA1] hypothetical protein HMPREF9593_00751 [Propionibacterium acnes HL046PA2] hypothetical protein HMPREF9604_01446 [Propionibacterium acnes HL036PA1] hypothetical protein HMPREF9605_02462 [Propionibacterium acnes HL036PA2] hypothetical protein HMPREF9611_01448 [Propionibacterium acnes HL063PA1] hypothetical protein HMPREF9612_01710 [Propionibacterium acnes HL063PA2] hypothetical protein HMPREF9616_01550 [Propionibacterium acnes HL007PA1] hypothetical protein HMPREF9617_01652 [Propionibacterium acnes HL056PA1] hypothetical protein HMPREF9591_01344 [Propionibacterium acnes HL086PA1] hypothetical protein HMPREF9597_01930 [Propionibacterium acnes HL005PA4] hypothetical protein HMPREF9598_00729 [Propionibacterium acnes HL050PA1] hypothetical protein HMPREF9600_01420 [Propionibacterium acnes HL050PA3] hypothetical protein HMPREF9603_01762 [Propionibacterium acnes HL001PA1] hypothetical protein HMPREF9606_01421 [Propionibacterium acnes HL036PA3] hypothetical protein HMPREF9608_00280 [Propionibacterium acnes HL067PA1] hypothetical protein HMPREF9609_02424 [Propionibacterium acnes HL027PA1] hypothetical protein HMPREF9613_01107 [Propionibacterium acnes HL002PA1] hypothetical protein HMPREF9614_02579 [Propionibacterium acnes HL002PA2] hypothetical protein HMPREF9618_02635 [Propionibacterium acnes HL082PA1] hypothetical protein HMPREF9619_01189 [Propionibacterium acnes HL082PA2] hypothetical protein HMPREF9620_01659 [Propionibacterium acnes HL037PA1] hypothetical protein HMPREF9564_01571 [Propionibacterium acnes HL053PA1] hypothetical protein HMPREF9566_01556 [Propionibacterium acnes HL045PA1] hypothetical protein HMPREF9573_01552 [Propionibacterium acnes HL072PA2] hypothetical protein HMPREF9577_02545 [Propionibacterium acnes HL110PA3] hypothetical protein HMPREF9594_02671 [Propionibacterium acnes HL005PA1] hypothetical protein HMPREF9595_01827 [Propionibacterium acnes HL005PA2] hypothetical protein HMPREF9596_01691 [Propionibacterium acnes HL005PA3] hypothetical protein HMPREF9565_02420 [Propionibacterium acnes HL053PA2] hypothetical protein HMPREF9569_02435 [Propionibacterium acnes HL078PA1] hypothetical protein HMPREF9610_01091 [Propionibacterium acnes HL027PA2] hypothetical protein HMPREF9615_02443 [Propionibacterium acnes HL002PA3] hypothetical protein HMPREF9572_00461 [Propionibacterium acnes HL072PA1] hypothetical protein HMPREF9578_02535 [Propionibacterium acnes HL110PA4] hypothetical protein HMPREF9582_02576 [Propionibacterium acnes HL060PA1] hypothetical protein HMPREF9583_01150 [Propionibacterium acnes HL038PA1] hypothetical protein HMPREF9590_00259 [Propionibacterium acnes HL059PA2] hypothetical protein HMPREF9592_01899 [Propionibacterium acnes HL046PA1] hypothetical protein HMPREF9601_00485 [Propionibacterium acnes HL030PA1] hypothetical protein HMPREF9602_01734 [Propionibacterium acnes HL030PA2] acetyltransferase, GNAT family [Propionibacterium acnes HL096PA2] acetyltransferase, GNAT family [Propionibacterium acnes HL103PA1] acetyltransferase, GNAT family [Propionibacterium acnes HL096PA3] acetyltransferase, GNAT family [Propionibacterium acnes HL097PA1] hypothetical protein HMPREF9570_02559 [Propionibacterium acnes HL043PA1] hypothetical protein HMPREF9571_02162 [Propionibacterium acnes HL043PA2] hypothetical protein HMPREF9568_00851 [Propionibacterium acnes HL013PA2] hypothetical protein HMPREF9581_02605 [Propionibacterium acnes HL087PA3] hypothetical protein HMPREF9584_01071 [Propionibacterium acnes HL092PA1] hypothetical protein HMPREF9586_01322 [Propionibacterium acnes HL083PA2] hypothetical protein HMPREF9563_02300 [Propionibacterium acnes HL020PA1] hypothetical protein HMPREF9579_02366 [Propionibacterium acnes HL087PA1] hypothetical protein HMPREF9588_00098 [Propionibacterium acnes HL025PA2] acetyltransferase, GNAT family [Propionibacterium acnes HL099PA1] # 1 63 1 63 63 127 100.0 3e-28 MTVLAAQLVSTGLANFLCCLVLAVFGVVAWISIRHNIRGIDFDEVPCGPALKESHREDAN RGI >gi|302034501|gb|GL383250.1| GENE 14 10875 - 11030 65 51 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLDKVRAGGLAKVIRHSSQPTRTTPFSTTGQPGLGGVPSIEAQMPRFASSL >gi|302034501|gb|GL383250.1| GENE 15 10983 - 12998 1500 671 aa, chain + ## HITS:1 COG:BS_yyaL KEGG:ns NR:ns ## COG: BS_yyaL COG1331 # Protein_GI_number: 16081134 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Highly conserved protein containing a thioredoxin domain # Organism: Bacillus subtilis # 2 659 7 676 689 370 32.0 1e-102 MPNYLGESTSPYLIQHAANPVDWFPWGEEAFDEARSRDVPVMVSVGYSSCHWCHVMALES FSDPEVAEVVNANVVPVKVDREERPEVDAALMQVTLAMTGQGGWPNTVFLTPEGKPFFAG TYFPPVRRGRLPGFVELVEALGGAWRERRDEVVSSAEAIVEHLRPVEKDPEVARPIAGEL IDAVGADYDIVHGGFGSPTKFPMPTLLDALLVKGDPTSLDMAQNTCEHLVRGGIFDQVGG GFHRYSTDSQWVVPHFEKMLYDNALLLATMARCWRRTADHDSDRRDLYSHAARRTVAWLN REMRLPNGLYAAGLDADSDDAAGHTHEGIYYLWNQDLITDALGTDEAEWLRPLVHLEPCN DNGLGTLQLRGRVEWERINADMDTLLEARGRRSAPARDEKAITAWNAMLIDGLVEAGMIL REWSWVEQARELADSLWTAHWDHGMALRTSFHDRPGVPAVCEDYAWVALSFAGLAGATGE SVWLDHAVEVLGEAVARFSAVDGSFLDAEDSFLLTVTAHTLTDDACPSPTAAMVMALRRV GLMAERADFIERANKASVALLPVVSATPRFAGWAVADFLITDEARRGLKPAGVVIADTTD EPSDLAAAAWRMAPAGSAIMRRLNEDSGFGTWFNERVPRDGQPTCWVCRGAVCFEPVTDY LDLKEPLWRRA >gi|302034501|gb|GL383250.1| GENE 16 13020 - 13841 675 273 aa, chain - ## HITS:1 COG:ML2467 KEGG:ns NR:ns ## COG: ML2467 COG0020 # Protein_GI_number: 15828335 # Func_class: I Lipid transport and metabolism # Function: Undecaprenyl pyrophosphate synthase # Organism: Mycobacterium leprae # 24 273 12 262 262 234 49.0 9e-62 MSSLDHRLSKVSETLDRMHPSGLLYTTYEARLLDQLDRSRLPQHVAVLADGNRRWARLNA PGEPLVAGYEAGADRLREFCTWCDAVGIPIITLWVLSTDNLQRAETGELGPLLKVIESLV DSLADNSRWRVQAVGDLDLLPDDMAESLCRAGRTSIGHVGMHINVAVAYGGRHELRDAFR SLLAEEAEKGTSLADLARTLEIDQIEDHLYTRGQPDPDLIIRTSGEQRLSGFLMWQSAHS EFYFCEALWPDFRKVDFLRALRSFTQRERRYGR >gi|302034501|gb|GL383250.1| GENE 17 13986 - 14657 578 223 aa, chain + ## HITS:1 COG:MT1117 KEGG:ns NR:ns ## COG: MT1117 COG1272 # Protein_GI_number: 15840522 # Func_class: R General function prediction only # Function: Predicted membrane protein, hemolysin III homolog # Organism: Mycobacterium tuberculosis CDC1551 # 13 222 28 241 242 140 38.0 3e-33 MATGCSSKTKNRSSVLPKPRLRGWVHTVMAPLILLAGVGLMIATPTWGNRFAVGVWMLTG LELFGNSAVYHRVPWGAKVKDVLRRIDHANIAVFIAGTYTPLAVSLATGASRVILLAIIW ACALLGVAFRFVWNGVPRWASTILYVVMGWTALWWLPQFWRTCGPAVVILILIGGVFYTV GAISYARQKPNPSPTWFGFHEVFHSCTAVAAICHAVAIGLAVI >gi|302034501|gb|GL383250.1| GENE 18 14774 - 16153 1112 459 aa, chain + ## HITS:1 COG:Cgl0065 KEGG:ns NR:ns ## COG: Cgl0065 COG1875 # Protein_GI_number: 19551315 # Func_class: T Signal transduction mechanisms # Function: Predicted ATPase related to phosphate starvation-inducible protein PhoH # Organism: Corynebacterium glutamicum # 28 455 27 454 458 545 65.0 1e-155 MRPLTSREVFVSVRPEGSERAHSLIPEAPEGRRTYVLDTSVLLSDPRALLNFAEHEVVVP IVVITELEGKRHHPELGHFARAALRILDRLRLENGGLVGPVPVNNEGGVLLVELNHSDPL CLPDGFRLGDNDTRILAVAQSYRLAGHSVVLVTKDLPLRVKASAIGLEAEEYRHELVPSS GWTGMVNLEVPDEMISTLYEEGSVVDSIFDEIPVHAGLVLEGPNGTALARRMSDASARLV PNDQEAFGIRGRSAEQRIALDILLDPQVGIVSMGGRAGTGKSALALCAGLEAVMERQLHK KVMVFRPLYAVGGQDLGYLPGDEGDKMAPWGQAVLDTLTSVTNNYVIEEVMSRGMLEILP LTHIRGRSLHDAFVIVDEAQSLERNVLLTVLSRIGQNSRVVLTHDVAQRDNLRVGRYDGV AAVVERLRGHDLFGHVTLTRSERSPIAALVTSMMEDMVG >gi|302034501|gb|GL383250.1| GENE 19 16233 - 16748 309 171 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3627 NR:ns ## KEGG: HMPREF0675_3627 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 171 21 191 191 323 100.0 1e-87 MLLSLAIILVPVMLIVWFFTRTPDEPNIQQVDWKPVVASARSRAGYPVLAPKEVPEVWRP TKARYANKGDRWVGNTISAGDRWELGFLTSKNVYLAVDQSDEPGRAFVASVTRSATEDGK VSVGRYIWTKMVSPDDRTHALVTKIGSATAVVVADTDYRVLTDFAGMLTTS >gi|302034501|gb|GL383250.1| GENE 20 16775 - 17011 274 78 aa, chain - ## HITS:1 COG:ML1941 KEGG:ns NR:ns ## COG: ML1941 COG1722 # Protein_GI_number: 15828046 # Func_class: L Replication, recombination and repair # Function: Exonuclease VII small subunit # Organism: Mycobacterium leprae # 1 66 10 75 87 59 48.0 2e-09 MTDTTPNSAPEEPEITYEAARDELVEIVTRLESGGISLAETMTLWERGEKLADICQSWLN GARARIEAARSDAETAQP >gi|302034501|gb|GL383250.1| GENE 21 17008 - 18255 742 415 aa, chain - ## HITS:1 COG:MT1139 KEGG:ns NR:ns ## COG: MT1139 COG1570 # Protein_GI_number: 15840545 # Func_class: L Replication, recombination and repair # Function: Exonuclease VII, large subunit # Organism: Mycobacterium tuberculosis CDC1551 # 5 395 4 405 415 306 45.0 4e-83 MVEPNAADNPRSLAWVVNAVKGWVERCGAIWVQAQVIEITRRSSPTQFLTLRDPIEEISA SATCHRRVLDAAGPIETGMTVTALIRPTVWSRTGRLSFEISEITPTGEGQLLAQLERRKR LLEAEGLFDVTLHRPIPVLPRGIGLITGAGSDAERDVQRHATLRWPAARFVVHNTRVQGP MAAQQIIAALADLDADPTVDVIVIARGGGPLEDLLPFSDEALVRAVYATRTPVVSAIGHD RDNPILDLVADLRASTPTDAGKLIVPDAAEQSQAIETARAQLRQAVTRFIDVESGHLSQI RSRPVMVNPAATLDIAVERLDSTLQRLRLATHRVLDAESRDVNHMLERVRAMSPKATLDR GYAILADTEGDSITSVNDTNARANLLVYLSDGTLSVTVDSLDRRTPNRPTFQEDS >gi|302034501|gb|GL383250.1| GENE 22 18336 - 21113 2124 925 aa, chain - ## HITS:1 COG:alr1386 KEGG:ns NR:ns ## COG: alr1386 COG3391 # Protein_GI_number: 17228881 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Nostoc sp. PCC 7120 # 75 827 85 982 1001 327 30.0 7e-89 MSAPHDTHVSRRLRRGLASACAVVTAIAAFSPAHAAPSPNKAGPMSGSTGRTTVGQLLTP AGQLTTLGDLPLNEALSPDGRYLIVSNNGQGTQSLQVIKTATGKVVQTIPYKSPESLYMG LAFSPDGTHLFASAAGNHKIRTYHFDCGKLVETSAIQMPVVSPKLTKVNLYPAGLAVTND SKRLVVADQLADAVSVIDLATNKIQTTHIGHRPVWVTLSKDSTKAFVSSQGGADVAEVDI TKSQPLATHKINVGFHPNKSVLTPDGKSLYVANGDADTISVVDVASHRQTATIPVNRNGS KLVGANPTGLALSQDGKRLYVTNSGHNEVAVINAATRKVIGDIPTGWYPTQVLAHDGKLS ITSAKGLGAGPNNGPGHPNPTDPRDTAENQYSGSMIKGLLSTVSEPDAATLAKLTATVEK NNTANDPARSSAVPNQIGTTSSKIKHVIYIVRENRTFDQELGSNGRGNADPSLNLFGEES APNTRALARQFTTFDNFYADAEVSANGWNWVSQANSNPWSEEMWPSNYSGRGAPYPAESN DPDSRAKEHDSYFWEHLSKNNISFRNYGFYTTLDKKGKAHGVDKKILDPNTDHDFIGWSL DCPDSARSFAPMAKNCGPKSRVDEWKSDFNKQLAKGSVPTVQLVRFGNDHTQATKVGVPT PQAYVADNDQAIGQLVETVSHSPIWKDTAIFLTEDDAQNGPDHVDAHRTIGEVISPYTRT GGVDSTFYSTVSMLHTMEGILGIGPLTQFDAFSTPMSAAFTDKPDLTPYQAASPSYDMKT LNTPKAPMAKESGEQDTTKEDDIDEQVFNKAIWKAVKGARSTMPEPKHSVIQSGPVLTYD DDDDEGEKLKPGDVDLDELGSYSKDAKGFPVWTPDDKRFDPAQGIDPCSPKPGPTLTPTV PTAVMPSNSTHRGEGRHPGLPRTGV >gi|302034501|gb|GL383250.1| GENE 23 21263 - 22234 403 323 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229229955|ref|ZP_04354520.1| SSU ribosomal protein S1P; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Desulfotomaculum acetoxidans DSM 771] # 11 285 2 270 676 159 32 9e-38 MAVTGACTNKKLYLAAPRGYCAGVDRAVVTVEKALEVYGAPVYVRKQIVHNRHVVETLEG RGAIFVDELDEVPDDALVVFSAHGVSPQVKKEATDRGLRTIDATCPLVTKVHHEAKRFAN QDTQILLIGHAGHEEVEGTTGEAPENITLVQTPADVDGLALDRDRPVAWLSQTTLSVDET VETVDRIRDLHPQLIDPPSDDICYATQNRQHAVKQMAPQCDLVIVVGSKNSSNTGRLVEV ALESGAKASYRVDNAGEIEETWLDGVSTIGVTSGASVPEALVQGVIDLLISKGWPPAEEE TLIEESLSFALPPQLRKRRTTAK >gi|302034501|gb|GL383250.1| GENE 24 22238 - 23458 875 406 aa, chain - ## HITS:1 COG:CPn0982 KEGG:ns NR:ns ## COG: CPn0982 COG1322 # Protein_GI_number: 15618890 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Chlamydophila pneumoniae CWL029 # 63 384 71 385 411 197 34.0 4e-50 MTNIVVGLIGLAIGVALGWLIAQLRTSQRIAEATSAARVATERLEAAEKIATDRDALATL FKALSAQSMADQNERATQSAQRTMSDAQRLLAPVSLALERLDRRLAEVEQERTDMTASLR EQVAGVSTAGESLRKETASLVAALRKPQIRGAWGEMQLQRTAEVAGMLEHCDFQTQQTTT AQGAPQRPDMTVKLSGRRCIHVDAKTPLAAFLEAAQCDDAEEYDAQMARFARHVRTHIDQ LSAKGYWRTDLDSPEFVVCFLPSDALLQAALQEIPDLHEYANRRGIVLASPSVLIPMLRT VALAWRQEAVARSATEVAALGRDLHKRLGTLAGNLDKMGRSLTSTVRAYNSALGSLETRV LVQARRFEHLGVTADDIASPAPIEEAVRPLTSPELTENQTEVGLPE >gi|302034501|gb|GL383250.1| GENE 25 23537 - 24823 869 428 aa, chain + ## HITS:1 COG:Cgl1463 KEGG:ns NR:ns ## COG: Cgl1463 COG1362 # Protein_GI_number: 19552713 # Func_class: E Amino acid transport and metabolism # Function: Aspartyl aminopeptidase # Organism: Corynebacterium glutamicum # 17 424 6 417 420 441 52.0 1e-123 MVVMADKSVPTSDHIRDIISFVEASPTSYHAVVELTRRLEQAGFQRLEETESWPSVEGRR YVVRDGAVIAWITPEKVTPQLGARIVGSHTDSPSFKLKPNATVTNQGWQQVGMEVYGGGL LNSWLDRDLGLSGRLVTCDGQAHLVRTGPILRISQLAPHLDRTVNDDLKLDRQRHLMPIL SVGKPDLDVEDLLCEAAGIKRDELAFHDVFAHLTQSPAVIGPYGEFLASQRMDNLSSVHS SVAAFVDVKPTSDVAVMACFDHEEVGSATRSGACGPFLEDVLVRIAEGFGMTGAAYRAMI AKSSCVSSDAGHGVHPNYVEKFDPANHPLLNEGPLLKINAHQRYATDGVGGALWQRACAA AGVPTQNFVSNNSVPCGSTIGPLTATRLGMLTVDVGVPLMSMHSTRELAGTADLTYLSKA LGAYWAGA >gi|302034501|gb|GL383250.1| GENE 26 24972 - 26045 1173 357 aa, chain + ## HITS:1 COG:ML1936 KEGG:ns NR:ns ## COG: ML1936 COG0012 # Protein_GI_number: 15828041 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted GTPase, probable translation factor # Organism: Mycobacterium leprae # 1 354 1 354 356 422 61.0 1e-118 MALTIGIVGLPNAGKSTLFNALTKNDVLAANYPFATIEPNVGVVGVPDKRLDVLTEMFHS AKTIPATVSFVDIAGIVKGASKGEGMGNEFLSNIREADAICQVTRCFADDDVTHVNGHVD PSDDIETITTELVLADLQTMEKQLPKLQKEAAIKKESRPKVEAWEQAKAVLEEGKTIFSA GLDPEPLHDLFLLTTKPFIYVFNCDQDQLADADFQAKMEKLVAPAEAIFLDAEFEAELAE MEPEDAAEFLADAGIEEPGLDKLARVGFDTLGLQTFLTAGEKESRAWTIHKGDTAPEAAG VIHTDFQKGFIKAQVVSFGDLVEFGGEKEAQAAGKLRLEGKEYVMQDGDVAEFRFNV >gi|302034501|gb|GL383250.1| GENE 27 26338 - 26913 349 191 aa, chain + ## HITS:1 COG:no KEGG:PPA0576 NR:ns ## KEGG: PPA0576 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 191 55 245 245 384 97.0 1e-105 MPPEESETELPDSRGVIPPTALEAGEENNGFLNAFGMFWRRDEVDWDKCGQTLLGAQLKV AKPVNFSGQVGVYILYSGERVICVGRITEPRLGPRLWDHTRDRLAGRWDRFSWFGVLIAK DDGTLGDVPCGNFAVDMLVSTMEALLIEGLEPPQNRRRGDGFNATEFIQATDPEVECRRA KQLLFKLTDSK >gi|302034501|gb|GL383250.1| GENE 28 26991 - 27458 438 155 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3637 NR:ns ## KEGG: HMPREF0675_3637 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 155 1 155 155 311 100.0 4e-84 MAVPVDFTTVSAQGLETSEHPEALAGLRANEARYFHNKFKHTFEVSPASEEPYALAWVTQ ILAEERDITIASPALEISINDVEGIHWVHVFYASGLAINVLWTVANSGKRAVGFKLCDGM DQPAELSAFKFARQRSKLAGTIRGSYFVIKGDYPY >gi|302034501|gb|GL383250.1| GENE 29 27521 - 28702 740 393 aa, chain - ## HITS:1 COG:CC1133 KEGG:ns NR:ns ## COG: CC1133 COG0738 # Protein_GI_number: 16125385 # Func_class: G Carbohydrate transport and metabolism # Function: Fucose permease # Organism: Caulobacter vibrioides # 4 360 14 367 411 63 23.0 9e-10 MHMLLLAIIYLAFISLGLPDSLVGAGWPAMHESLGVPLSCAGFITFIIATGTIISSLMSD RLTTRFGPGRVTAASVALTAAALFGFSFSTQFWVLCLWAMPYGLGAGTVDAALNNYAALH YTARHMNWLHGCWGLGASISPFIMSQALSSGHGWPSAYRTVGTLQAILTAIVTVSLPLWN KTRKINGGGSAKLFDHVPTRAALATPGVPAVLGAFFSYCAVESTSMLWAASYLVSVRGTD GATAAAFASLFVLGITAGRFLAGFVAERIGDRMLVRGGFITVGVGVVLVGLPGVPSWVAL AGLVIAGLGSAPIYPAIIHSTPTTFGAHNSQAIIGIQMAAAYVVTTLAPPLFGAISANTG LWTLPLYLIVLVIFGLVMSEHVTRRERARAQDG >gi|302034501|gb|GL383250.1| GENE 30 28697 - 28894 101 65 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MHDERGPFVIPQLGFGHREWLVNPMLTMSSNRLAWGIESSLKLGGQVVEKCLYLGQLLWR GGIQR >gi|302034501|gb|GL383250.1| GENE 31 28814 - 29341 346 175 aa, chain - ## HITS:1 COG:CC0915 KEGG:ns NR:ns ## COG: CC0915 COG1846 # Protein_GI_number: 16125167 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Caulobacter vibrioides # 26 171 6 147 148 128 49.0 7e-30 MCADVSVVQRYKKHSAQLSCVQSCCASNILPVVHDQTLDLDDQFCFSLYRASRAVTRAYR PLLEGIGLTYPQYLAMLVLWHAEGPVGVNDIGTRLHLDSGTLTPLLRRLEDAGFITRAWS NDDERRRIISLTEGGRSLRHQAAGLPERMLALYPTPPQELAQVKAFLDDLATQLE >gi|302034501|gb|GL383250.1| GENE 32 29366 - 29794 471 142 aa, chain + ## HITS:1 COG:Cgl0024 KEGG:ns NR:ns ## COG: Cgl0024 COG1764 # Protein_GI_number: 19551274 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Corynebacterium glutamicum # 8 142 35 170 172 162 64.0 1e-40 MIEIEPVYTTEAIATGAGRNGHVQSPDGRVSEDLAVPVEMGGSGKGTNPEQLFAAGYAAC FHSALQMVARQAKKDLGDSSVGARVSIGQAGEGFGLAVALEVVIPALPHDEAQRLADKAH QVCPYSNATRGNIRVDVTVVDD >gi|302034501|gb|GL383250.1| GENE 33 29914 - 30603 535 229 aa, chain + ## HITS:1 COG:SMb20212 KEGG:ns NR:ns ## COG: SMb20212 COG0693 # Protein_GI_number: 16263953 # Func_class: R General function prediction only # Function: Putative intracellular protease/amidase # Organism: Sinorhizobium meliloti # 3 225 4 225 226 247 58.0 1e-65 MSRILMILTSHNQLGDTGRKTGFWLEEFAAPYYVFCDAGHDVTLASPRGGQPPIDPTSSL PQMQTDATRRFDVDEQAKRALATTTPLSEVDIATFDAVFYPGGHGPLWDLADDPTSQQII LDSDAVGRPLGLVCHAPGVLHTVKKHDGTLFVTDRSVTGFTDGEEEAAGLTGVVPFLVED SLKQAGARYSKGPDGDSYVVTDKTLVTGQNPASSAATAQRLLDLLCVRV >gi|302034501|gb|GL383250.1| GENE 34 30967 - 31326 104 119 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTIGRIYSGRQLILNQHLAPYSINIETLFNNAKIHPSEGCFTPVPNQAPSESNDVLADLY SSESHPREPAIASRDAAGTPTRSLPPLRTHSSIEMNPIQPWIPITTALDSSTSNPSYET >gi|302034501|gb|GL383250.1| GENE 35 31319 - 32875 1328 518 aa, chain + ## HITS:1 COG:PA5170 KEGG:ns NR:ns ## COG: PA5170 COG0531 # Protein_GI_number: 15600363 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Pseudomonas aeruginosa # 48 517 8 482 482 404 54.0 1e-112 MVILGPGASPAGHRNNGVAKGYEVSMAEQVVGQASTEVSMGEDVNVGKLSFPAMLSLVVG SMIGGGIFSLPQNIAAAASPGPMVIGWTITGIGMICLAMVYQKLAIRRPDLDNGIYAYAK AGFGDFIGFNSAWGYWLSALIGNVGYLVLLFSTVGKFVPAFAGGNTVWAVLAASVLLWLT HALVLAGVRTAAFVNTIATIAKIVPLITFIAICAVAFDVGVFTEDFWGSHAGLGSVFAQT KSMMLVTVWVFIGIEGASIYSKRARKRSDVGKATVGGFLFVLVLLIGVNLLSMGIMHRAK LAGLPDASMGDVLSSVVGPWGSVLVSAGVIISLLGALLAWILLCGETMQVPGEDGTMPKL FGRINKHEAPAPALWITNIVSQICLVMTVLWDGAYLAMATLAAALILVPYLLSAAFALKM VIKGETYENGPRSQRVRDAVVATVATLYGIWLVVAAGADALMLAALLYLPGAAVFVWAKR ELRAKRIFKPYEIGVLVLLALISVVSIISIVTGRLSLT >gi|302034501|gb|GL383250.1| GENE 36 33006 - 34250 511 414 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149002994|ref|ZP_01827905.1| 50S ribosomal protein L33 [Streptococcus pneumoniae SP14-BS69] # 4 412 5 409 409 201 32 3e-50 MTTPIGAWSEVGKLREVMVCEPRLAHRRLTPSNCRELLFDDVLWVEKAQEDHRDFVAKMR ERGIVVHEMHQLLSEVLDISEGRSWVLDRKLSPNAVGLGVDEDVRDWLNDMPSDTLAEYL IGGVAYGEVPADRRKHVLGALIKAHSENEFLIPPLPNTQFTRDTTAWIFGGVTFNPMRWP ARQQETVLASAIYTHHPIFAERDFKIWYGCAEADHGMSTLEGGDIMPVGNGTVLIGMGER SSWQAITQVARSLFAQNAARRMVVAAMAPDRASMHLDTVFSFCDVDLVTLYKPVVDTITP LVLEPSSEAAGFSVRVDDRHFTDVVASSLGLDGLRTVETGGDCWEAQREQWDDGNNVVAL EPGVVVGYDRNTATNALLAKAGVEVVEIKAAELGRGRGGGHCMTCPITRDPVDY >gi|302034501|gb|GL383250.1| GENE 37 34324 - 35328 839 334 aa, chain + ## HITS:1 COG:HI0596 KEGG:ns NR:ns ## COG: HI0596 COG0078 # Protein_GI_number: 16272539 # Func_class: E Amino acid transport and metabolism # Function: Ornithine carbamoyltransferase # Organism: Haemophilus influenzae # 1 334 1 334 334 520 73.0 1e-147 MAFNLKNRHLLSLAHHSTEEIKFLVGLAADLKEAKYCGTEQPLLKGKNIALIFEKASTRT RCAFEVAAHDQGAHVTYLGPSGSHIGHKESMKDTARVLGRMYDGIEYRGFHQSVVEELAE YAGVPVFNGLTDEFHPTQMLADALTMREHAEKPFHEIKFAYVGDGRNNMGRSLLLLGAKL GMDVRIGAPEGLQPEAELVERCREWAEQSGGKVLVTASAEEAVRDVDFIHTDVWVSMGEP VESWSERVGTLLPFQINDALVKAAGNPRVKVMHCLPAFHNSETAVGAEVAKTYPELANGI EVTESVFESPACIAFDQAENRMHTIKAVLVSSLA >gi|302034501|gb|GL383250.1| GENE 38 35349 - 36254 636 301 aa, chain + ## HITS:1 COG:HI0595 KEGG:ns NR:ns ## COG: HI0595 COG0549 # Protein_GI_number: 16272538 # Func_class: E Amino acid transport and metabolism # Function: Carbamate kinase # Organism: Haemophilus influenzae # 1 299 1 299 310 347 59.0 1e-95 MRILVALGGNALLRRGETMTAENQRANVRIAANHIKEVAVDHEVVVAHGNGPQVGLLALQ STAYEEVGIYPLDVLGAESQAMIGYMIEQELGNVMPQDQQIVTMITMTVVDADDPAFKHP TKPIGPVYDEATARRLAAEKGWTIAPDGEYYRRVVASPQPRNIIEQKAIRQLVDSGVMVV CAGGGGVPCVYDEDGILHGAEAVIDKDLASAELAVRVDADLLVIATDVAGVFRNWGEPDQ ERIEQMHASDALNTEFAAGSMGPKVKAACNFALATGKRAVIGSLEDIQGLVAGTHGTAII P >gi|302034501|gb|GL383250.1| GENE 39 36641 - 36934 147 97 aa, chain + ## HITS:1 COG:Cgl1366 KEGG:ns NR:ns ## COG: Cgl1366 COG1438 # Protein_GI_number: 19552616 # Func_class: K Transcription # Function: Arginine repressor # Organism: Corynebacterium glutamicum # 11 80 82 151 156 65 44.0 3e-11 MTTGLPARNHLARMCHSLCIAVNYNNGAVVIKTPPGAAQYLGSAIDTSGVHTVLGTIAGD DTVLVVCKVGVEGEDLARLFREMAETGLPAKGLVAVN >gi|302034501|gb|GL383250.1| GENE 40 37116 - 37778 231 220 aa, chain + ## HITS:1 COG:Cgl2470 KEGG:ns NR:ns ## COG: Cgl2470 COG1990 # Protein_GI_number: 19553720 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 26 218 1 180 182 81 34.0 1e-15 MQLVLLRDKHHPARQVDACEAAARAVVFLLDDPRTQPGGPWHDAVRQWSDKRIRKIVRRA SGKRWDDVQVLDGVTISQDPPPYASPETGPARVRAFVPAPVHPQPKQIDKLQVAGTNLPA DGDSATTEPVVTIEINPRIEMTTGKACAQCGHAAQLAHEAMSFGNDDDRHTLETWRHDGF RVRVVTPTVEHWDSDVARVRVVDAGFTEFDGPTATTRARW >gi|302034501|gb|GL383250.1| GENE 41 37802 - 38320 486 172 aa, chain + ## HITS:1 COG:PA0484 KEGG:ns NR:ns ## COG: PA0484 COG2716 # Protein_GI_number: 15595681 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system regulatory protein # Organism: Pseudomonas aeruginosa # 1 168 1 168 171 109 37.0 2e-24 MTQLLLTVVGADRSGLVSDLSEIVAHYDGNWLDSRMARLAGAFAGIVLVDIKSSKVEPLK ADLAGLEVKGLRVTVTDTTPQQDEGEAALVVHLVGHDHPGIIHKVTATMARLGVTIDDLS TGLREAPMGDGILFEAQVQCRITNATTLDDLRSELEAIATEIMVDIDLVDRS >gi|302034501|gb|GL383250.1| GENE 42 38346 - 39314 735 322 aa, chain + ## HITS:1 COG:Cgl0100 KEGG:ns NR:ns ## COG: Cgl0100 COG0667 # Protein_GI_number: 19551350 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Corynebacterium glutamicum # 1 320 5 315 315 249 43.0 6e-66 MTRIPGTDLDIRPLVLGANTFGWTADEHDSHAILDAFLGAGGSLVDTADGYSHWADGNNG GESERIIGSWLEQGGRRDDIVIATKVATHPEFKGLAPENISAAVDASLARLHTDHIDLYY AHFDDDTQQIEDMATAFDKLVKAGKVRWVGLSNFSVAREQKWLEVAEHEGLASPVALQPQ YNLLHRADVEDPQGYGQLASEYSLALLPYFSLASGFLTGKYATRNDLHGVTRESMMAAYL PDAEHEKAAFAVLDQLRQIAGDHRVEVTSVSLAWLLAKGVTAPIASARTIDQLDALLAAP DLVLSSDEVCALDEVSAVFAHE >gi|302034501|gb|GL383250.1| GENE 43 39367 - 39870 407 167 aa, chain + ## HITS:1 COG:Cgl1062 KEGG:ns NR:ns ## COG: Cgl1062 COG2077 # Protein_GI_number: 19552312 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Corynebacterium glutamicum # 1 163 4 166 168 203 63.0 1e-52 MATTAFMGKPLNTVGDLPQVGSLLPSFALVKSDLSELRSDELKGKKLVLNIFPSVDTGVC ATSVRTFNEKAAGLDDTIVLCVSRDLPFAQARFCGAEGIKNVVVASAFRSHFGKDLGVTL ADGPMQHLLARAIIVVNAEGKVTYTQLVDEITTEPDYDAALEAASKA >gi|302034501|gb|GL383250.1| GENE 44 40031 - 41455 1094 474 aa, chain + ## HITS:1 COG:lin0791 KEGG:ns NR:ns ## COG: lin0791 COG0833 # Protein_GI_number: 16799865 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Listeria innocua # 3 460 7 472 486 541 59.0 1e-153 MDGELKRGLSSRHMNMIAIGGAIGTGLFVASGATISQAGPGGALVAYFAMGLMVFLLMQS LGEMSSYLPVPGAFETYATRFVSPSFGFALGWNYWFNWAITVAAELAAASIVMAYWWPGV PAWMWSVGFLALLFLLNVLSARAYGESEFWFAIIKVTAVIVFLVLGILMIAGVMGTSPGL SHWRRGDAPFVHGFGGILTVFLIAGFSFQGTELIGIAAGESKDPRMTIPKATRQIFWRIM IFYIGAIAVIGLLLPYTDPHLLAGEVTDVAVSPFTLVLKRAGVAAAAAVMNAVILTSVLS AGNSGLYASTRMLYALAREGKAPRILGRTSRRGVPVPALIVTTLVGAACFATSLVGSGQA YTWLVNISGLCGFIAWIGIAICHIQFRRAFQAQGHDLSELPYRARWYPAGPIVAGVLCVI VTLGQGRDAVLSGDVTDMIVAYISIPVFLALWVGHKIVTKAPHADLSTADLHHD >gi|302034501|gb|GL383250.1| GENE 45 41500 - 42735 750 411 aa, chain + ## HITS:1 COG:Cgl0864 KEGG:ns NR:ns ## COG: Cgl0864 COG0366 # Protein_GI_number: 19552114 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Corynebacterium glutamicum # 7 411 3 386 386 419 52.0 1e-117 MAYRPGWVDHLIGWHVYPLGFVGAPARLESQEVSHRLAHLGAWLDHAVALGCSSLALGPV FSSASHGYDTLDYFTIDPRLGDDDDFDHLLQAAHARGLSVLLDGVFNHVSRRNRIVQDAQ SAGPDSDAGRMVRWCAGRLDVFEGHSDLVALNHDNPAVREHVTRIMNYWCGRGVDGWRLD AAYSVNPEFWAAVLPSVREKYPDVWIFGEVIHGDYASIVRASGMDSVTQYELWKGIWSSI ESRNFFELDHALGRHNEFSDAFTPMTFVGNHDVTRIASRVGQDGAVLATAILATIGGIPL IYYGDELAYRGVKEERFGGDDDIRPVFPASPADLSNLGADTLRAHQSLLGLRRRHPWLVD ARTESLDLTNERYVYRTGVPGVEPLIVELDVRDGCSVLIREAGQVVWSSGA >gi|302034501|gb|GL383250.1| GENE 46 42760 - 43926 1159 388 aa, chain - ## HITS:1 COG:ECs2829 KEGG:ns NR:ns ## COG: ECs2829 COG1004 # Protein_GI_number: 15832083 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted UDP-glucose 6-dehydrogenase # Organism: Escherichia coli O157:H7 # 1 388 1 388 388 512 63.0 1e-145 MKIAVAGLGYVGMANAVLLAQHNSVVAIDIDAERVDMVNNRHTTIVDPLIAEYLAHHNLD LRATTDPQEAYRGADFVVIATPTNYDPGQNYFDTSSVDEVLDLVQELAPHTTTVIKSTIP VGFVEGVRKERSGLDVIFSPEFLREGKALFDNLHPSRIVVGADSPKAHLFADLMAAGAVD TNVPVLFVGATEAEAIKLFANTYLAMRVSFFNELDTYASQRGLSTRQVIDGVCLDPRIGN HYNNPSFGYGGYCLPKDTRQLLANYQDVPQTLIQAIVDSNTVRKDFIASDIIARDPKRVG IFRLVMKAGSDNFRSSSIQGVMKRIKAKGIEVVVYEPTFDGDEFFHSEVTKNLAFFKANC DVIIANRMSPDLSDVADKVYTRDLFGGD >gi|302034501|gb|GL383250.1| GENE 47 44070 - 44642 413 190 aa, chain - ## HITS:1 COG:no KEGG:PPA0594 NR:ns ## KEGG: PPA0594 # Name: not_defined # Def: putative lysophospholipase (EC:3.1.1.5) # Organism: P.acnes # Pathway: Glycerophospholipid metabolism [PATH:pac00564] # 1 190 123 312 312 377 100.0 1e-103 MATRPNARLDGLALGGVVAQLRGLETTLDHEALAKAMATNPAGPAPESLVAQMFDGCTDR LSEGDGPTGWVARNRDVVADYGKDKFNNFGAQMSTRFLQGFADIYDMANGEGFYAAMPKI PIALFAGSEDPAGNFGTGVQAVAQRLRRDGHDVELHLYDGLRHEVHNEPESRADVESSLV TFVDRVAKRN >gi|302034501|gb|GL383250.1| GENE 48 44654 - 44995 248 113 aa, chain - ## HITS:1 COG:lin1226 KEGG:ns NR:ns ## COG: lin1226 COG2267 # Protein_GI_number: 16800295 # Func_class: I Lipid transport and metabolism # Function: Lysophospholipase # Organism: Listeria innocua # 22 106 20 106 306 57 36.0 8e-09 MALQEIEFTSRNRRDAIQAWAYEPVGTPAAVVQIIHGLGEHSRRYLHMISALLDASFIVV ADDHAGHGRTAMQSGQWADAGDNSAEVVISDELTLQQQLTGHPGWSSVTVGVP >gi|302034501|gb|GL383250.1| GENE 49 44946 - 45107 107 53 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MASRLLREVNSISCNAMIDLLVSGSAVNSGEANTSWAAGEWLVSTGVMSKAAN >gi|302034501|gb|GL383250.1| GENE 50 45125 - 45325 101 66 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVMSFPLTAAGQFRSLTGFPLTASKSHEGFLGTSRYDTRPRTTTSVQRGHKCTIVHMQDE RPRSNC >gi|302034501|gb|GL383250.1| GENE 51 45541 - 47451 1957 636 aa, chain + ## HITS:1 COG:ML1800_1 KEGG:ns NR:ns ## COG: ML1800_1 COG1884 # Protein_GI_number: 15827959 # Func_class: I Lipid transport and metabolism # Function: Methylmalonyl-CoA mutase, N-terminal domain/subunit # Organism: Mycobacterium leprae # 33 467 17 462 483 208 35.0 2e-53 MTDPDNLASKSVEDRMPEELSLAGDFPKVTHEQWEEAVLKVLNRGRPEGKELNIEQGMKR LEPTTVDGIQIEPMYRRQDAPEKLGVPGVPPFTRGTTIREGGMDAWDVRALHEDPDVAFT KKAVIADLERGVTSLWLRVGADAIKPEDIAGDLKDVLLDLAKVEVSSRDDQEAAAQALLD VYIESKIDADKLSFNLGLDPIGFAALNGGNPDLSGMAEWVKKTENYKNSRPFVVDATIYH NAGAGDVHELAWAVATGVEYVRAFIEQGLTAEQAFDSINFRVTATHDEFLTISRLRALRT LWNRVGEVFEVPAAKRGARQEAVTSWRELTRDDPYVNILRGTIATFGAAVGGAEAVTTLP FDAAIGLPKSDFSRRIARNTGIILAEESNIGRANDPAGGSFYVEALTKKLEDAGWAEFQA VEAAGGMAAALTGDHVRTELDKLNTERAKRLATRKQPITAVSEFPLLDAKSVETKPYPAA PAREGLEWHRDAEVFEALVDRSATCPERPKVFLACLGTRRDFGPREGFSAPVWHIAGMET PECEGGTTEEVVKAFKESGADIADLCSNAKTYAAQGLEVAKALKEAGAKLVYLSGAFKEF GDDAAEAEKVIDGRIYLGMDVVDVLTATLDTLGVAK >gi|302034501|gb|GL383250.1| GENE 52 47448 - 49637 2112 729 aa, chain + ## HITS:1 COG:Rv1493_1 KEGG:ns NR:ns ## COG: Rv1493_1 COG1884 # Protein_GI_number: 15608631 # Func_class: I Lipid transport and metabolism # Function: Methylmalonyl-CoA mutase, N-terminal domain/subunit # Organism: Mycobacterium tuberculosis H37Rv # 34 598 46 617 617 788 70.0 0 MTTLPRFDSINLGDSSVPADAQEQFARLAAAAGEQEPWTTPEQIPVGHLYSEDVYGDMDW LDTYAGLPPFTHGPYATMYAFRPWTIRQYAGFSTAKESNAFYRRNLAAGQKGLSVAFDLP THRGYDSDNPRVPGDVGMAGVAVDSILDMRELFAGIPLDRMSVSMTMNGAVLPILALYVV TAEEQGAKPEQLAGTIQNDILKEFMVRNTYIYPPLPSMRIISDIFAYTSANMPKWNSISI SGYHMQEAGATADIEMAYTLADGVDYIRAGESVGLQVDQFAPRLSFFWAIGTNFFMEVAK MRAARMLWAKLVHQFNPKNPKSMSLRTHSQTSGWSLTAQDVYNNVIRTCVEAMGATQGHT QSLHTNSLDEAIALPTDFSARIARNTQLFIQQESGTCRVIDPWSGSAYVEKLTLELARKA WAHIQEVEKAGGMAKAIEKGIPKMRIEEAAARTQARIDSGRQPLIGVNKYRLDEEEPLEV LKVDNTQVLKEQKAKLEQLRANRDEEACQAALEKITWAAANPDPSDPDRNLLKLCIDAGR ADASVGEMSDAMEKVFGRYTAQIRTIEGVYSKAAGNSESTKKVHELIKQFEEKEGRRPRI MIAKMGQDGHDRGQKVVATAYADLGMDVDVGPLFQTPEETARQAVEGDVHVVGVSSLAAG HLTLVPALRKELDKLGRSDIMIVVGGVIPTQDFDELRKDGAAAIYPPGTVIPDAAVELME KLLAAHNDD >gi|302034501|gb|GL383250.1| GENE 53 49791 - 50837 945 348 aa, chain + ## HITS:1 COG:Cgl1491 KEGG:ns NR:ns ## COG: Cgl1491 COG1703 # Protein_GI_number: 19552741 # Func_class: E Amino acid transport and metabolism # Function: Putative periplasmic protein kinase ArgK and related GTPases of G3E family # Organism: Corynebacterium glutamicum # 9 333 40 363 363 314 51.0 2e-85 MKEMVIMPIDVPELVEQVLAGSRQHIARALTLVESSKPAHREMAREMLRQLAPRTGDAIR VGISGVPGAGKSTFINAVGGRLIDEFGYKVAVLAVDPSSTRTGGSILGDRTRMGDLANRD EAFVRPSPSGGHLGGVARATRESMIVMEAAGYNVVLVETVGVGQSEVAVAGMVDTFLMLS VAGTGDQLQGIKKGILELADVVAVNKADGDNAGNARVSARDLSIAMKLVSSDADKRRVPV LTCSSYTKEGLDDVWQAIVDHRAYLEKDGSLQIRRTEQQREWLWNMVRNEILESLDTDPS VQQTAERIEAGLGIEATSALEGAEEILRAFARAVPSLPWAQGELTSGS >gi|302034501|gb|GL383250.1| GENE 54 51059 - 52531 1020 490 aa, chain + ## HITS:1 COG:RSc2654 KEGG:ns NR:ns ## COG: RSc2654 COG1404 # Protein_GI_number: 17547373 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Subtilisin-like serine proteases # Organism: Ralstonia solanacearum # 53 488 47 523 679 191 36.0 2e-48 MALRRTLTLMLCAITGASLVATAVPSSAAPGFTISPLRTSDSIQSTSGFVVHLKDRSASA QRVRTAHAASAMQATSTSLRGLVDRAAKVRGAHVTESLARANNSMSVQVSQGLNATAAKA FASEIERNPEVESVEPVLHMTINENTGVHPAAVSSAPNDQYWNRQWGLNSENGIDAPGAW ATNTGSGVTVAVIDSGITKHPDLDGKVLPGYDFISDRYAAGDGNGRDSDPSDEGDWTRAG ACTRRDVPSSWHGTHVAGIIGAATNNARGVAGAAPGAKILPVRALGHCGGTDVDIADGIT WASGGEVPGVPTNHNPAKVINLSLGGPSNYCPITYQRAIDAAVSRGSTVVVAAGNEAMDV RKSTPGNCRNVVVVGATGETGAQSYFSNYGSTVDVSAPGGDDRTGDMILSTLNNGETTPA APTYGYMEGTSQAAPHVSAVVALMIAANPNLTPARIKEILKQSVNPAKCKTGCGTGIVDA RKAVKAAKSA >gi|302034501|gb|GL383250.1| GENE 55 52611 - 52826 137 71 aa, chain - ## HITS:1 COG:Cgl0147 KEGG:ns NR:ns ## COG: Cgl0147 COG2501 # Protein_GI_number: 19551397 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 2 51 13 62 97 62 58.0 3e-10 MIRLGQYLKFANLAETGGQARELIASGMVSVNGEVETRRGRQLHPGDEVTVTNGGQTVTA TVDLTEPDVPW >gi|302034501|gb|GL383250.1| GENE 56 52872 - 53633 608 253 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 252 1 242 245 238 48 2e-61 MVHITGLHKEFGPLHILKGIDLDVAPGEVCVLIGPSGSGKSTLLRCINQLETFEVGEIWV GGQRVGYEHDPLPDGRLKRLSDKGIAAQRARVGMVFQRFNLFPHMTALGNVMEAPIKVSG LTKEEAKPLAMSLLDRVGMADRANHYPTELSGGQQQRVAIARAMAMKPELMLFDEPTSAL DPELVGEVLNVLKDLAGEGMTMIVVTHEMGFAREVADHVVFMDDGVVVETGSASQVIGNP KSNRLRGFIDSVL >gi|302034501|gb|GL383250.1| GENE 57 53669 - 54217 366 182 aa, chain - ## HITS:1 COG:Cgl1299 KEGG:ns NR:ns ## COG: Cgl1299 COG0765 # Protein_GI_number: 19552549 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Corynebacterium glutamicum # 5 169 136 301 316 163 50.0 2e-40 MPFGDLQFASVETEKVVTALAAAIIGLGLNEGAYLAEITRSGLESVDVGQTEAAKALGMK PSLIMRRAIIPQAMRVIIPPPGNETIGMLKTTSLVLALPFTLDLQYATSAIANCTYAPIP LLVVAACWYLVMTSVLMIGQHFLEQYFGRGFNGRSSSKRLRRQAAIQAAGTTYKNIALEV EQ >gi|302034501|gb|GL383250.1| GENE 58 54263 - 54595 117 110 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3667 NR:ns ## KEGG: HMPREF0675_3667 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 110 1 110 110 207 100.0 1e-52 MRCHSDTEPSLNANIIKSLNNDPTIATIVPNDIKIRHPPQRRHSQLHTRTVIDTDGSTII SYDSAGLRPGSCDEPNYQWSVVWLYLREVKIITGISYTILLTRQCPSEPP >gi|302034501|gb|GL383250.1| GENE 59 54644 - 55642 512 332 aa, chain - ## HITS:1 COG:VCA0132 KEGG:ns NR:ns ## COG: VCA0132 COG1609 # Protein_GI_number: 15600903 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Vibrio cholerae # 5 331 2 332 334 143 29.0 4e-34 MSSRATLSDVAKACGVSSQTVSRALNDSPLVRPETRAKVMTAVETVGYEPNLAARALAAG GSRAVGILLTTRLTHGMSTTFTALVGTLREHSRPFVLDTAIENDEESLRAALARLRGYSV QATILLAQRAKSVAIASQQRHGDKLVSVIAGHPDSPESPIVAIDQALGARLATKHLIEQG YRNLLHVPGDLEWQDASERLSSYIAVCKEVGIDPAWMPANSWGAEAGAAVAEELIAGHLP DAVLAGNDDIAIGMCHTFLTHGVRIPDDIGIVGFDDIPQARWMTPSLTTVVQDFEALGRQ AVEAAEALIAGEAPESCQLSPTLAVRHSSRRH >gi|302034501|gb|GL383250.1| GENE 60 55702 - 55905 83 67 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|289426729|ref|ZP_06428457.1| ## NR: gi|289426729|ref|ZP_06428457.1| conserved hypothetical protein [Propionibacterium acnes J165] conserved hypothetical protein [Propionibacterium acnes J165] # 1 67 23 89 89 125 97.0 7e-28 MMLIIAKSTVEWFTEFFARLFVCARIWCYAPINSTIEVDVYARGPRVRGWKTNGGPHVRF VANFAAP >gi|302034501|gb|GL383250.1| GENE 61 55859 - 57079 417 406 aa, chain + ## HITS:1 COG:slr1897 KEGG:ns NR:ns ## COG: slr1897 COG1653 # Protein_GI_number: 16329947 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Synechocystis # 53 263 36 246 433 77 26.0 5e-14 MEVLMSDSLPISRRRDLGLGATLAAGVGLSACGEGGDKGGSATAKASQLNLDTLSGEITF QAQGLKGTFDGFFNDLIKKFEKEHSGCTIKWTDLPGTDDFDTTMVTQASNGTMADVVNMS SSTIMALSRADYLLDIETSVPGIGDKFVPDVWGKLKLGKDNEHTALPWYFGPFVVTYNKD IFKDVGLDPEIPPKTMTEYLDFAKKITAAGKQAVYGNTSWYMLAEWRALGVKVMNDDFTK FTFASESNALLWLTTMADMYAKGEFRRTRLPGASIGPRSTVKDPWLSARRMRPFFATSKR MPPRHMPVPVLAQSLSMTASSRCFPGNTSRSRRRPRTLRSRPLSQSGSPVWSRARMPSLR LAPSAPRKRPRLRPTCLTSMSRMASAPRWLTMSTLPLWVIPSRRMP >gi|302034501|gb|GL383250.1| GENE 62 57215 - 57490 217 91 aa, chain + ## HITS:1 COG:no KEGG:PPA2403 NR:ns ## KEGG: PPA2403 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 91 17 107 107 173 100.0 2e-42 MSRPRGSRRSGGHRHGRIQAVNGSARFRKPWVPYLWVGVPLLLVIYFYVYPFFNTLRLSF TDTTPLGEGETGSVLEITEKSSQTTHYGMLF >gi|302034501|gb|GL383250.1| GENE 63 57532 - 58011 339 159 aa, chain + ## HITS:1 COG:ML1426 KEGG:ns NR:ns ## COG: ML1426 COG1175 # Protein_GI_number: 15827751 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Mycobacterium leprae # 1 139 105 242 319 88 35.0 5e-18 MLPLILGVFVKEHVPGIGIFRTLFYLSAISSLVVIALAWSAILKDNGLVNNFLVGSGLIN SPVPFLTGRWWLIISSCLITLWSGVPYYMLMYLTALANIDKLLYEAAVIDGAGAVKSFFT VTVPGMKIMMALVSILSMIGCRRLPLRHDRWFHHYRSGF >gi|302034501|gb|GL383250.1| GENE 64 58039 - 58929 629 296 aa, chain + ## HITS:1 COG:all4824 KEGG:ns NR:ns ## COG: all4824 COG0395 # Protein_GI_number: 17232316 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Nostoc sp. PCC 7120 # 22 284 4 267 279 147 32.0 2e-35 MTTSTVFPASSALCVRKRSINKSKFHGWGLFRHYIALLVVFVVLVSPVFLPLLGAFKSSG DPIYGKGATAFPQHWSLNAFGELFRTTDIVRYIANLFAVCGLNIVSALVFSSVCGYMLSR KGWPGRGVVTAVALSALIFPFESIMLSLYSQVRSFGFYDTIIGIWPPGMIGPFHVRLMRA AFLGIPDEIEDAAYIDGAGEVRRFFTIFLPQVKGSLVVGLTAFIFAWQDYLWPLLITQSS SNYTMMIGIAQLQSSFGTDYRIVLAGAITAVIPIFLVFLASQRYFFRGIEEGGLKF >gi|302034501|gb|GL383250.1| GENE 65 59014 - 60384 1170 456 aa, chain + ## HITS:1 COG:TM0306 KEGG:ns NR:ns ## COG: TM0306 COG3669 # Protein_GI_number: 15643075 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-L-fucosidase # Organism: Thermotoga maritima # 21 395 3 384 449 119 27.0 1e-26 MTDNADLDPAELEAAGALGGSEDPGYQWPTDPLVVKNLKHWQDLTFGVIVHWGIYSAIGQ GGSWSLHRDDLGWFTDKAPQFPGDPNDDAGYQDWYYDQAKTFRGEDFDASEWAHACADAG MTYCVFTTKHHDGFCMYDSGYTNLKATSESSGLRRDILREVVDAFRGAGLETGAYFSKAD WSHACYWDRSKRIHDRFHNYDLEAQPERWQRFVDFTMDQITEILSNYGPMNVLWLDAGWV STPEEPIGIDDIATRAREIQPGIIVVDRAVHGPHENYRTPEQEIPEDILDYPWEACLTLT KEWCSLSPDDPAKPTSLIIANLIKIVSRGGNYLLGIGPDATGHMPDSVRRGLREIGGWMD VCGEGIMAARPADPEISAQGDNLEWYLTTKDSHLFAWGVANEDVVGADRLVVEGEYRQAR VLGGPVLETQTRDGRTVIEVPASPTQYAIGLELIEH >gi|302034501|gb|GL383250.1| GENE 66 60532 - 61107 292 191 aa, chain + ## HITS:1 COG:SP2158 KEGG:ns NR:ns ## COG: SP2158 COG2407 # Protein_GI_number: 15901968 # Func_class: G Carbohydrate transport and metabolism # Function: L-fucose isomerase and related proteins # Organism: Streptococcus pneumoniae TIGR4 # 3 160 78 237 588 166 51.0 3e-41 MGVCADLTVTASWDCIAEILDLTPDIPHARGFNATERSGAVTVAAAMAAYTQLGILAFAI YGHDVQNADDALTDDVSARILSFGRAALAVGLMRVRSYLAMGTVSMGIAGCHVPEQALQD YLGMRSQYIDMVELGRRITAGIYDHVEWKWAMAWVSASVRTEIRLTSSTAMLTSVNSWSI RSRWCWLPETS >gi|302034501|gb|GL383250.1| GENE 67 60990 - 62045 731 351 aa, chain + ## HITS:1 COG:SP2158 KEGG:ns NR:ns ## COG: SP2158 COG2407 # Protein_GI_number: 15901968 # Func_class: G Carbohydrate transport and metabolism # Function: L-fucose isomerase and related proteins # Organism: Streptococcus pneumoniae TIGR4 # 6 331 239 565 588 381 57.0 1e-105 MGLSIGEDRNPADKQHSDADKREQLEYSVKMVLVARDLMNGNLRLADMGFKEEAGGYDAI AAGFQGKRQWTDGKLNGDVMETLLNTSFDSDGLRQPQVFATEGDALNGIAMLLGSLLTQR PQFFSDVRTYWSPEAVRRVTGHELTGRAAGGFVDFRNSGASTLNATECEAEADGTPVIKH WWDLTEDDIQADLAATTFHSATQEYFPGGGFSTHFTTVGDTTVTAVRMNMVAGVGPTLQI VEGRTLPDEGTDTIVERADPTWPTTFFVSRIPSSGAFSSVYDWMDKWGANHTSTGYSHIG ADVLTLAAMLRIPVSMHNIETKDIFRPRTWSSSEPSSNRRARDTDRRVRPS >gi|302034501|gb|GL383250.1| GENE 68 62153 - 62449 280 98 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3676 NR:ns ## KEGG: HMPREF0675_3676 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 98 1 98 98 184 100.0 8e-46 MPESSIVMPEVPLADYATPSTPGVVEATSKYAKTHTVCLMEYHGAFTWGPDVWAAYMAME RLEYTAQITYLLERRDGLRELPDDEIVKLVSMRPQYGL >gi|302034501|gb|GL383250.1| GENE 69 62412 - 62807 129 131 aa, chain - ## HITS:1 COG:no KEGG:PPA0611 NR:ns ## KEGG: PPA0611 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 131 10 140 140 248 100.0 5e-65 MLCILIRYVVSPGPGELARYVVEVYTGVAPVLATEPNGVKPAIGELYLDVTKLAWTADPS GNTSERIAITSVGATVTLSNDSDGPGHHCSRGPGSDDCCSGHLGLDRRQRLRSAAHRRLI TTRIAVASTPV >gi|302034501|gb|GL383250.1| GENE 70 62916 - 63599 275 227 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 24 227 17 222 245 110 34 6e-23 MLNRHSLICHNVVMQFPHAGRPALDGVSLVMPAGSVNVVVGASGSGKSTLLMCLAGLEAP TRGRVVHGDVDVYGLDDRRRAAWRLQTIGLVFQNSELVPELTLRDNIALPLELLGTGRRD ALKRADHLAEILDLSESNKRRPSEVSGGQAQRAAVGRALAHRPAVVLADEPTGALDTTNR HAVIDLLDELVRAEGSTLVMVTHDEHTLPGNARIIRLADGRIVGDAS >gi|302034501|gb|GL383250.1| GENE 71 63668 - 65770 965 700 aa, chain + ## HITS:1 COG:no KEGG:PPA0613 NR:ns ## KEGG: PPA0613 # Name: not_defined # Def: putative permease # Organism: P.acnes # Pathway: not_defined # 1 700 25 724 724 1219 99.0 0 MIVGVALATLGLAVGVTLPRVTAQQQEVRDARTPILAPDEPADGHTGFKVQELQVDGTPW TSFVVNHPADRLPPGLKHWPQPGHTIVSPRLKSLMDAGVVNISSLGTIDPVVVDRAALAS PDELFSITTTSDQAGCRELKAFGLTRIGDSGVSSRTVWIEVIGLVALPAAVLLWTSLSLS AASRRDRFMTLVRMGCDPDWCGQVFAVEVSGTAGLGALLGLALFIPVQNALGSSGTLGLT WWPWQARLRWPEWLIIVVIMVIASGWLARRALRRLLASRRPPRRRARLGTVRHLLGIVGL LLVVAAIGLEGWICLTMALAHDGQRLGDHAAGYIMGAAVFGTLGAVMSAHLIIVWCAGRE QLRLPTRLGLTLARAHYLDSAAMVIALTIMVGLAGFGSGFLVSGTHDTAGDPHHVLVQVP FTDRTATEQQALRRVTRPRRMIYTATDGRTLVAASCADLAAFDPYPRSCPRTPATRRDAS STWTFGHDKHTTVRTIKPVSRLPVTYDDDALLARNDPRLAGLTPDILEFTADSTTGDLDR LVDQLHGAAPSYAAYAGAENPDTLQAFIQQQGIVRSGLAAGFLLILVACTAAFVELRWGM RRTIAVQQAVGTPARILRRSFLMQMIVTILPAQTMSLVVGVLAGWAINAAIGSTDANQSF DPTIAALPVTMWAVSVLAIMVTAFATGAPRFQLSAVRDTT >gi|302034501|gb|GL383250.1| GENE 72 65867 - 66070 67 67 aa, chain + ## HITS:1 COG:no KEGG:PPA0614 NR:ns ## KEGG: PPA0614 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 67 26 92 92 127 100.0 1e-28 MASGVKQGEPSAGNTVHRGAVPNDLISAAIVAADFDDLELYRLDIAMHESSSRRNTVPAH CVQVTTS >gi|302034501|gb|GL383250.1| GENE 73 66128 - 66982 838 284 aa, chain - ## HITS:1 COG:Cgl2579 KEGG:ns NR:ns ## COG: Cgl2579 COG1108 # Protein_GI_number: 19553829 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Corynebacterium glutamicum # 1 276 1 274 293 206 51.0 5e-53 MVFSTIINFDSFSQLVPLVRGSIIAGIILGVLAGLIGPMIHARDLAFAIHGTSELSFAGA AVALFFGASVTKGAVVGSLVAALILGLLGVKAAERNASIGIMLPFGMGIGVLFLSLYKGR SSNKFGLLTGQIVAVDTTELSTLVVVAIFVAVCLGIIWRPLFFASVDPEAAKARGVPMRF LSIVFMLLLGLTTAMAVQLVGALLVLSLLITPTAAAAKVTAHPLAMSLLSIVFATVSAVG GIMLSLGPGLPISPYVTTVSFLIYLVCLGLGAIRQRRGWSRRIV >gi|302034501|gb|GL383250.1| GENE 74 66997 - 67800 218 267 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 19 235 19 232 305 88 28 3e-16 MRIEPARLTDAKVAFGNRVLWSGLNLIVEPGEFIAVLGPNGVGKTTLLRVLLGQIPLTAG TAMVAGRPVRRGSTHIGYVPQQRSLETTAPIRGRDLVGMGIDGHKWGFGWFSRSRRRRID EAIASVGATAFANAPLTMMSGGEQQRLRIAQALVTNPQLLLCDEPLSSLDLRHQQEVTRL IDNARRTRNLGVLFVTHEINPVLPYVDRVVYVAGGKVRVGTPDEVLRSDVLSEMYGSHVE VFHRGNRIIVLADEERSTHLHAPGRRI >gi|302034501|gb|GL383250.1| GENE 75 67842 - 68759 977 305 aa, chain - ## HITS:1 COG:MT2119 KEGG:ns NR:ns ## COG: MT2119 COG0803 # Protein_GI_number: 15841548 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Mycobacterium tuberculosis CDC1551 # 46 305 109 375 511 137 33.0 2e-32 MHRHLLAIATLSACALAMAGCSNSGPDSGSGPSASSDKVDVVASTNVWGSVAQAIGGDKV NVHSIIDSPDQDPHDYEATAKDKLAFSKAKIAITNGGGYDDWATKLVKSTSPQADFIDAV ETSGLKKPGDKEFNEHVFYSIDSVRKVAKVVESDLVKTSPDNKSTFETNLKDFESKLTDL KARATKVGKKHPHSTAIATEPVAGYLLEDMKIKNITPDEFVGQSETEAGPSTKVVHETTD LLTQKKASILLVNGQTSDDVTKALQKAASKANVHEVGVWETFPEGVDNYPDFIGKAIDSI DKGLA >gi|302034501|gb|GL383250.1| GENE 76 68878 - 69429 323 183 aa, chain - ## HITS:1 COG:mlr6855 KEGG:ns NR:ns ## COG: mlr6855 COG1335 # Protein_GI_number: 13475713 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Mesorhizobium loti # 7 180 38 219 222 68 30.0 5e-12 MSQTWLIVIDPQTIFASPTSPWGSPAFPTIIDPIDRMVAAFHGRTIVTRWIPTATRCGSW CDYFDRWTFADRPANDPIFDLVDEAQPWAERPTIDVATFGKWGSQLSAVTGEHPHLLLAG VSTDCCVITTALAAADAGAWVKVVSDACAGSAPDNHEAALTVMDLYSPQIDVVTSSQVLA TLA >gi|302034501|gb|GL383250.1| GENE 77 69426 - 69983 529 185 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3685 NR:ns ## KEGG: HMPREF0675_3685 # Name: not_defined # Def: permease, cytosine/purine, uracil, thiamine, allantoin family # Organism: P.acnes_SK137 # Pathway: not_defined # 13 185 315 487 487 322 100.0 6e-87 MLAAILSLLAGAINGIYSSGLTLLTLGIRVPRPAASLIDGTILTIGTLYVVFVAPNFISP FQSFLVTLGVPLSGWTGIMMADITLRRRPYDEADLFNGSGRYGHFDPISIITFVIVTVIG WGLVVNTYEGVNWNDWQGFLLGPIGLGGREGDWAHANLGVFGALVLGYVVTLIARRGTVR RQESR >gi|302034501|gb|GL383250.1| GENE 78 69868 - 70890 674 340 aa, chain - ## HITS:1 COG:Ta0597 KEGG:ns NR:ns ## COG: Ta0597 COG1457 # Protein_GI_number: 16081696 # Func_class: F Nucleotide transport and metabolism # Function: Purine-cytosine permease and related proteins # Organism: Thermoplasma acidophilum # 33 275 35 269 460 75 26.0 2e-13 MTQTATKTNATTHKGIETTGIEIVKESQRTARPQDLFLPWFASNVSVFGMSYGAFMLGFG VSFWQAIAATLVGVIVSFGFCGIIAIAGKRGSAPTMVLSRAAFGTQGNKIPGVISWMTSI GWETSLAITAVLATTTIFRRLGWSSGNSVKICATIIVAFLIVGGAVAGYHIIMKLQAVLT WITGILTVIYLVMAVSHIDWHAATSLPAASFPAFVGTLTLIMTGTGLGWTNIAADWSRYQ SRTSPGFAIAFWNVFGASLPLVILITGGLLLAASSKKSIRRHWGRSHWRASNHPADVVPH PVLVGCDPLPVGRCHQRHLFVWTHLAHPGNPSPTPSSFSH >gi|302034501|gb|GL383250.1| GENE 79 70980 - 74438 2570 1152 aa, chain + ## HITS:1 COG:Cgl0099_2 KEGG:ns NR:ns ## COG: Cgl0099_2 COG1012 # Protein_GI_number: 19551349 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Corynebacterium glutamicum # 400 1146 2 753 763 575 44.0 1e-163 MSIDADTWGSPSPRPADLADEAVDQVHTWLRDANGASKRRTDRAQIAAGLLSDVLSHPAG LPFTLAFIDRVVRPEDARTAAANLAELAKVDCSFLPAALQVAVRAGGRMAPVAPNVVVPA ARHALRQLVGHLVVDARPAQLTRTLKALRSAGVRLNLNLLGEAVLGDREAASRLEGTMAL LAREDVDYVSIKISAVVNQLDLWAHKATVDEVVEQLLPLYHLAENSPKPKFINLDMEEYH DLDLTMEVFQKLLDRPELRHVEAGIVLQAYLPDSLSALQGLVEWADRRTAAGGAGIKVRL VKGANLAMEKVDAEIHGWQQTPWPSKLATDTNYKRILDWALTPERTHSVRYGVAGHNLFD IALTKLLCEHRGVRDRVEFEMLLGMAPDQVERIGADVGGLLLYTPVVDPAHFDVAISYLV RRLEENAASENFMSAIFQLGHDSQLFAREEARFRTAVAGITREVPKPRREQEPDRAPDLS NGFVQSTDSDPSLPNIRVWAGEVAEKMKGCELGESTLANNHLDTIAEVNAVIATALEAQH SWAGRGGNARAEILRTVTHAFATRRGDLLAVAGAETGKILAEGDVEVSEAIDFAAWYVDR AEELEGVDGAQFVPPRVTVVTPPWNFALSITAGSTLAALAAGSSVLLKPAPQARHCAAVI SECLWEAGIPRDVLQLVDVEENEAGKHLVSHPEVDRVILTGAWETAKLFRSWRHDLPVLA ETSGKNSIIVTENADYDLAAADIIKSAFGNAGQKCSAASLIILVGQAYRSQRLRHQILDA ASSIRVGSPSDLRSQMGPLAEPASGKLLDGLTKLDPGQEWALEPVRIDEEGRYWSPGVRS GIKPGDPYHLTEYFGPITGIMYAPDLATAIAYQNGTAFGLTAGLHSLDPAEIEFWAERAN AGNLYVNRSITGAIVGRQPFGGWKRSAVGPGAKAGGYHYLQVLGTWRRAEVSAPTPADRP CALVEQFVGHIEGLVTRDERAWLLDAVARDAREWDEWFGRSIDVGGLEKERNILRYRPAS TQVRGCADAKLVDVARVVAAGLLAAGDNISVCLDPSLGEGLGRALRSVGVAVTTASDEDW YASLGASRVRLVGGNPSRAADEADGDPDLALWANEVTSAPQVELLPFLREQSVSMTAHRF GNPDAGVLSVRL >gi|302034501|gb|GL383250.1| GENE 80 74469 - 75518 639 349 aa, chain - ## HITS:1 COG:PH0655 KEGG:ns NR:ns ## COG: PH0655 COG1063 # Protein_GI_number: 14590542 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Pyrococcus horikoshii # 1 337 1 337 348 160 33.0 2e-39 MTHTMPALVLNGPGDVQVAEKPIPTPGPGEVVLAVEATTICGTDLRIISGEKTAGVRPGV TLGHEIAGRIASLGEGVEGLVVGQQATISIVVSCGTCRACLAGRDHLCSHCELVGYGLDG GLAPWLCVPAQAVSRGNIIPVATEIPATRLALAEPLSCVLNGHRRHGGVNPGETVVIIGG GAIGLLHTALNLACGAGRVILCEKHADRRDRAAAMGAVTTCPEHLSEVVTEHTGGYGAEL VIVAIGRNELTEESLNLAAPGGRVSWFAGFPKGSTTTITPNTVHYQELTISGGSNASRAD VHRAVDMLGRGNIDETPIVTHTFGLSQWTEAVDAVRGHVGVKIAIDPRR >gi|302034501|gb|GL383250.1| GENE 81 75617 - 77368 1049 583 aa, chain + ## HITS:1 COG:SMb20767 KEGG:ns NR:ns ## COG: SMb20767 COG2376 # Protein_GI_number: 16265207 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Sinorhizobium meliloti # 8 573 1 570 572 451 53.0 1e-126 MMTGDPDMTRLVNNPDNFPSQAVAGLVSAFPNHLRPVFGGVVRAARTDRKVALVVGGGSG HYPAFAGWVGPGFADGAVCGNIFSSPSASQAYAVCKAADRGAGLLIGFGNYAGDVLHFGQ AAERLRSEGIDARCLLVTDDIASAPDHLKRRGIAGDLPVFKVTAAACEEGRDIDEVVAIF DRVNDRTRSLGVAFAGCTLPGADEPLFRVEAGQMGVGMGIHGEPGIHDETLGTADEVAAM LVNRLLADRPENPGTRVVPIVNGLGSTKYEELFVLWNDISRHLEKAGLAIVDPQVGEFVT SLDMAGVSLTLVWLDDVIEPLWLAACDTPAYRRGTVGQVDFDTTPLPQEVERVMVANPGS RASGSLAGVIVEALEVVATRLSERSSELGRLDSVAGDGDHGIGMARGSRAALAEARRVSG DGAAAATTLNAAGSAWSEHAGGTSGALWGAVLTAIGAVLGDEDPAGEDTIPRAARAALDA VIRLGGASVGDKTMVDAMDPFVTTLESSSDPLPQAWESACHAADMAAQATSEVTATVGRA RPLGDKSLGTPDPGAVSFHEVVVAVGSVLSKSALSNGRFRAQR >gi|302034501|gb|GL383250.1| GENE 82 77359 - 77862 498 167 aa, chain - ## HITS:1 COG:Cgl1433 KEGG:ns NR:ns ## COG: Cgl1433 COG2236 # Protein_GI_number: 19552683 # Func_class: R General function prediction only # Function: Predicted phosphoribosyltransferases # Organism: Corynebacterium glutamicum # 12 164 3 154 158 134 48.0 8e-32 MTAYHADASDLEGKEILTWETFGDAAEELAAQIHHSGFDPEILIAVARGGMIPGGALTYS LGVKLTDAINVEFYTDVQETLPDPVLLAPMLDTESIRNKRILIVDDVVDSGRTLALVLEL LRGFEADVRSAVLYAKPTTVINPDFVWKATDKWIVFPWSAKPPVGQR >gi|302034501|gb|GL383250.1| GENE 83 77952 - 78452 432 166 aa, chain - ## HITS:1 COG:BMEI0379 KEGG:ns NR:ns ## COG: BMEI0379 COG1247 # Protein_GI_number: 17986662 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase and related acyltransferases # Organism: Brucella melitensis # 1 165 1 164 164 103 35.0 1e-22 MDVNIRTMEERDLPAASRIYNQSAVATTYSYTVVNTNVEDRLSWWRELIADSRPLLVAEV DGTMAGYANYHRFREGGGYDVTAEVTIWLDPQARGQGVGRKLMTELIRRARADDRLRNLL SVIDSDNERSISFHSAMGFVEVGRLPHIAYKLGNWRTAVLMQLTLD >gi|302034501|gb|GL383250.1| GENE 84 78397 - 78582 127 61 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313771526|gb|EFS37492.1| ## NR: gi|313771526|gb|EFS37492.1| hypothetical protein HMPREF9574_02241 [Propionibacterium acnes HL074PA1] # 19 61 1 43 43 62 100.0 8e-09 MRLAAGRSRSSMVRMLTSMDGNYSDQVGDYGGYLPSGTLASGGHRCGLLTVGAMSDTTGY G >gi|302034501|gb|GL383250.1| GENE 85 78699 - 80363 1401 554 aa, chain + ## HITS:1 COG:PM0753 KEGG:ns NR:ns ## COG: PM0753 COG3288 # Protein_GI_number: 15602618 # Func_class: C Energy production and conversion # Function: NAD/NADP transhydrogenase alpha subunit # Organism: Pasteurella multocida # 40 553 1 508 509 570 59.0 1e-162 MRWVTASGVRHFSLHIAPNLGKRATPVSWVRTFGRKVTIMIIGIPRELLPGENRVAATPT TVPALLKLGYEVVVEAGAGEHAAQPDRAYEEAGARIVEPGEAWKADLVLAVNEPTDDQIS LMRAGAVLVTFLHPRQDLALTEKLAAAGVTGLSMDMVPRISRAQSMDALSSMANISGYRA VVEAAFAYGRTFGGQVTAAGKVPPAKVFVIGTGVAGLAALGAANSMGAEVYATDVRPETA EQVQSMGATFLHVRTGDSDQGVSSDGYAKETSDDYNARAAELYMEQAGKDDVIITTAAIP GKPSPKLITAEMVYAMKPGSVIVDLAALGGGNCELTRPGESYVTDNGVTIIGYTDLPSRL PGQASQLYGTNLVNLLKLATPEKNGELVLNFDDEVIRTMTVCHEGQVAFPPPPVQVAAAP KPVAKAEIASAPATPEKKPRPWPQTFGIVAVLSIALIALLTFSPMEFVALFGTFAIAVVV GYYVVWNVTHALHTPLMSVTNAISGIIIVGAITQLGSESWGIRIVAALTVLIASINIFGG FTVTQRMLKMFRKA >gi|302034501|gb|GL383250.1| GENE 86 80367 - 81788 1469 473 aa, chain + ## HITS:1 COG:ECs2308 KEGG:ns NR:ns ## COG: ECs2308 COG1282 # Protein_GI_number: 15831562 # Func_class: C Energy production and conversion # Function: NAD/NADP transhydrogenase beta subunit # Organism: Escherichia coli O157:H7 # 17 473 5 462 462 508 64.0 1e-143 MTSTLLIAPLAGSLVNFVNASFIVAGLLFIFALAGLSKFETSKKGNAYGILGMVIAIVAT IVALVKLPGYSPVSIVLLFIPMLIGGAFGVWKAVKVEMTGMPELIAQLHSFVGLAAVLIG FNAFAEEGTGASTFQLSEIWIGIFIGALTFTGSLVAWGKLSGKVASKPLTLPGRNWINLG LLVVIIACGIWFSNVSGGIAWLPLALLTLASLFLGFHLVAAIGGADMPVVISMLNSYSGW AAAFSGFSLHIPVLIVTGALVGFSGAILSYIMCKAMNRSFVSVILGGFGDAPAVEGEGPA GEITEIKADELASQLSEASSVIIAPGYGMAVAQAQYPVAELAKKLRDNGVDVKFAIHPVA GRLPGHMNVLLAEAHVPYDIVMEMDEINDDFADADVVLVIGANDTVNPAAMDPGTPISGM PVLHVWEGHEVVVFKRSMKPGYAGVENPLFFADNTRMLFGDAKASVDALVAAL >gi|302034501|gb|GL383250.1| GENE 87 81934 - 82254 256 106 aa, chain + ## HITS:1 COG:Cgl1078 KEGG:ns NR:ns ## COG: Cgl1078 COG1146 # Protein_GI_number: 19552328 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Corynebacterium glutamicum # 1 105 1 105 105 144 71.0 3e-35 MTYVIGLPCVDVKDRACVEECPVDCIYEGERSLYIHPEECVDCGACEPVCPVEAIYYEDD LPGDQEKFLDINAEFFNELGSPGGAARLGPTHKDHPAVETLPPQGE >gi|302034501|gb|GL383250.1| GENE 88 82251 - 83354 920 367 aa, chain + ## HITS:1 COG:ML1488 KEGG:ns NR:ns ## COG: ML1488 COG0436 # Protein_GI_number: 15827783 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Mycobacterium leprae # 6 365 7 366 367 336 51.0 5e-92 MSRRNVSASLPTFPWDTIAEARRKAQSHPDGIVDLSMGTPVDPAPGVAIAALTAAGDAHG YPQVWGTPALRAGILDHMKQVWGAPASLEETSVLPVIGTKELVASLPGQLGLGPDSTIVI PACAYPTYRVGAQLAGAKIVAVNEPDEVDVAPDLIWINSPANPSGRVLDLDEMKAWVDLA RSTGAVLASDECYGEFVWEGESVSVLDERVNSGDVTGLLACLSMSKRSNMAGYRAGFAVG DAELTSELLTVRKHSGLMIPAPVVAAMQAALADRSHVLEQVKRYRLRRNVLKPALEKAGF RIDHSEGSLYLWATHDEDCRVTLDRLADLGILCSPGDFYVAGGSDHVRIGLTATDERINA AAQRIQP >gi|302034501|gb|GL383250.1| GENE 89 83355 - 84197 392 280 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3696 NR:ns ## KEGG: HMPREF0675_3696 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 280 8 287 287 465 100.0 1e-129 MVVLTILAGLGWGGYKVWKAVDPFATTEPEGCRVVVLGQSYDLDLEQSQNAAIITAESIR RGLPTRAAAIALTTAMQESKLRNIDYGDRDSLGLFQQRPSQGWGTAKQIMDPWYSSGKFY GELVKFSNWKTVSINDAAQQVQRSGYPEAYRKHEPLAKAWASALTGHSPSALTCINRSSK TTTVQELARTARRALAPKVATQVTGPTVTFTATDPVLVRAAVALTMASTSLGPIDRATVA TTSWRADSEHYASWGAAAGPSASPAASGTGWVSGTVTARS >gi|302034501|gb|GL383250.1| GENE 90 84295 - 85257 775 320 aa, chain - ## HITS:1 COG:ML1058 KEGG:ns NR:ns ## COG: ML1058 COG2171 # Protein_GI_number: 15827515 # Func_class: E Amino acid transport and metabolism # Function: Tetrahydrodipicolinate N-succinyltransferase # Organism: Mycobacterium leprae # 18 320 9 317 317 306 57.0 2e-83 MTQTTTSQTASADRRAWGWGLATVHEDGGVLDTWYPEPQLGCPDDSSAPADLHRVTEAGR DAIRNVHTEVVHTVIDLDAAPVDVSDAYLRLHLLSSRLAIPRTINLDGIFGVLPNNAWTT IGPIRMADLEKARMEARIAHAPFTVLLIDKFPRMVDFVVPTGVRIGDADRVRLGAHLAVG TTVMHEGFVNFNAGTLGHSMVEGRISQGVIVGDGTDIGGGASIMGTLSGGGKERVTIGRG CLLGAEAGIGISLGDNCVVEAGLYVTAGTKVTLPNGKVVKASELSGASDILYIRDSTTGI VKARGRGNHKIELNSDLHQN >gi|302034501|gb|GL383250.1| GENE 91 85352 - 85771 93 139 aa, chain - ## HITS:1 COG:no KEGG:PPA0631 NR:ns ## KEGG: PPA0631 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 42 139 1 98 98 174 98.0 9e-43 MAESTGTFSEVAGSSGGMTELSARPTITRFSGSQSFHELTILVIIDPFLVFPLAGATISK AHAPLSLSSHLCIPQNSSRPHGPLTDETAGSPASALVAAGDTSVNRARTDQPQSETADCC VFIDLPCLTVEEPSRRFQQ >gi|302034501|gb|GL383250.1| GENE 92 85641 - 86768 1050 375 aa, chain + ## HITS:1 COG:no KEGG:PPA0632 NR:ns ## KEGG: PPA0632 # Name: not_defined # Def: glycine amidinotransferase (EC:2.1.4.1) # Organism: P.acnes # Pathway: Glycine, serine and threonine metabolism [PATH:pac00260]; Arginine and proline metabolism [PATH:pac00330]; Metabolic pathways [PATH:pac01100] # 1 375 2 376 376 762 100.0 0 MTKIVNSWNDWDPLKRVIVGRADNSVIPPEEPATSEKVPVDSAMRGMWGPRPLETVEKAN AQLDNLVDVLEKHGVQVDRPTPLQWNQAIGTPDFRNDSMMTCMPPRDILLTIGSEIMASA NSFRCRYFEYLAYWPLMNSYFEDDPEFKWTQAPRPRLTDKSYKHNYYDERVSLEERLERT AAKDFVTTEVEPMWDAADVMRMGKDLFIQHGLTTNRKSMEWFKRYYPDFRVHAVNFPGDP YPIHIDATFVPLRPGLIINNPNRPLPQEQRKIFEANDWQIVDAAQPAHDTPPELCYSSVW LSMNCLVLDPKTVICEASEVHQMEQMDKLGMNVIPVAFRDAYPFGGGLHCATADVYREGT CEDYFPNQVDDPTLV >gi|302034501|gb|GL383250.1| GENE 93 86892 - 87953 809 353 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3700 NR:ns ## KEGG: HMPREF0675_3700 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 353 1 353 353 605 100.0 1e-171 MDMEPGIINVKQEVPGVGTMNQKVGFVSMLLSATGMGLVGTFGRLSTPVDPTTGSKYIIG DFLATGRMMVGVLGFLLIIVILGKWSELRRIRISPAIVGGGLAIGTSLALYVSATLMTTI ANAVFLIYTGPLFATILARIFLKERVGLRNGIFFMLVFTGMLLTVGLVQLGGGSVVSFGL QFGAVEGLPRKPLGDLFGLGSGVFYGLALFFYRYRGDVPSEIRGFWNFVFGTVGASVVLA LRIVFLDQTNPVAVMTGRNWLWAIVLFAVCGLGAIGLLVVAGKNLKAVELSTTAYWECVI ALLLGWLVWGESLTLTSSIGGALIVLGGAGPVVFELFGRDHLPKDERSVPDCG >gi|302034501|gb|GL383250.1| GENE 94 87969 - 89264 491 431 aa, chain + ## HITS:1 COG:STM4290 KEGG:ns NR:ns ## COG: STM4290 COG0477 # Protein_GI_number: 16767540 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 9 427 23 446 500 268 34.0 2e-71 MSEDRSRVVRKVIVASFLGNFVEWFDYATYSYLAVIISRVFFPQGTSRDALVQTFAIFAL SFLLRPIGAVLWGCWGDKYGRRWSLSVSILMMAVASFLIGCLPSFAVAGAFAPIGLLVCR MVQGFSASGEYAGAATFLAEYAPACRRGCYVSIVPASTAAGLLMGSLSAAMIAGCLPQGA VGTWGWRLPFLAAGPLGLLARHVWLELEDSPVYQELSESETGAAVGLGPLKTLLREHQRS LLVSIGVASLNAVGFYLVLTYLPTYLSNELGFSSRASFLSVNISLLFYLLAIFVMGWLSD HVGRKRMLVVASVGFVLFSVPLFIVMGTGQLWKACLAEGVLCLFLTANDGTMASYLAESF PTELRYTGFAVSQNLANAVFGGTASAVCTWVIGVTGSRLAPAWYLTAVSLLSLCAMVASH EHTGRDLSEVV >gi|302034501|gb|GL383250.1| GENE 95 89277 - 89768 315 163 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3702 NR:ns ## KEGG: HMPREF0675_3702 # Name: not_defined # Def: transcriptional regulator, TetR family # Organism: P.acnes_SK137 # Pathway: not_defined # 1 163 40 202 202 301 100.0 7e-81 MADLSPSSTVYYFDDHEELLAEAAKLNIRAWAHIAETIADEAENHRPKTGVDDVIEYLIR AMITRPAPLLGHYLELISAGDNETISNAYHAGRGRLNNAISRILAVANLPYPAELVIAVI DGGIVTALSEGRDPHATVEVLLRQLISLPTHKAPMSQAPPTTD >gi|302034501|gb|GL383250.1| GENE 96 90009 - 91088 609 359 aa, chain + ## HITS:1 COG:MT1240 KEGG:ns NR:ns ## COG: MT1240 COG0624 # Protein_GI_number: 15840646 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Mycobacterium tuberculosis CDC1551 # 1 357 2 353 354 314 50.0 2e-85 MDLKPTGDLHELFRRLVDIESVSMHEAPIADAVEETLAPHRHLEVTRLGNSVIARTHLGR SERVVIAGHLDTVPVVENLPSYIEQRSDGDYLVGRGTCDMKGGIAVALALAVSLENPVRD VTWAFYECEEIAAEHNGLEKIASWRPDLIDGDFAILMEPTDGRVEGGCQGTMRFTLEVPG RAAHSARSWVGHNAIHDLSAVLERLNRWQERDPFVEVDGLTFREGLNATMLDAGVAGNVI PPTATIQINYRFAPDKTTEQARQYMEDLFHEWPMNVLDLSAPARPGLDRPLAKSFVAAVG GEPGPKYGWTDVARFGQLGIPAVNFGPGNALCAHQVDECCRLGSLDECYRALHTWLASR >gi|302034501|gb|GL383250.1| GENE 97 91133 - 91438 196 101 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3704 NR:ns ## KEGG: HMPREF0675_3704 # Name: not_defined # Def: DivIVA domain protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 101 1 101 101 159 100.0 4e-38 MAWLLVVVVIIVIGLAVMAGSGKFGQVPPIVDDRPAPDLPEGDLSAESLRSVRFAVVPRG YSMSQVDQLLDRLASQMETGQGPDLTTTGRPIPDATGPDTE >gi|302034501|gb|GL383250.1| GENE 98 91479 - 91646 138 55 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3705 NR:ns ## KEGG: HMPREF0675_3705 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 55 1 55 55 94 100.0 2e-18 MAAMKPRTGDGPMEVTKEGRGIIMRVPVEGGGRLVVELNADEAQELLACFKDVVG >gi|302034501|gb|GL383250.1| GENE 99 91710 - 92894 874 394 aa, chain - ## HITS:1 COG:MT1250 KEGG:ns NR:ns ## COG: MT1250 COG0438 # Protein_GI_number: 15840656 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Mycobacterium tuberculosis CDC1551 # 1 387 1 383 387 399 55.0 1e-111 MYVSVLTREYPPTIYGGAGVHVAQLVPQLRTLIDVDVQCMGQPREGATAHAENYPEGANG ALRAFGADLSMVDAIPDEVDLVHSHTWYTNLAGLLAGVFHDVPHVISAHSLEPDRPWKAE QLGGGYRLSSWAEKTAYDAADAVIAVSEGMRADVLRAYPELDPDKVHVVRNGVNTDEFHP VTETDVCRDIGMDPDRPSVVFVGRITRQKGLVHLVHAATELDPETQLVLLAGAPDTPQIG EEFKAAFEEVRSSRRAPVIWVPEMLPRSSVRQVFSAATVFACPSVYEPLGIVNLEAMACA TPVVASRVGGIPEVVVDGSTGHLVDGVPTDLSTPEDVATFESAFAAAINDLTRNMERAKA FGTAGRQRCIDEFSWPRIAAQTVEVYQTAIKRHG >gi|302034501|gb|GL383250.1| GENE 100 93038 - 94264 1174 408 aa, chain + ## HITS:1 COG:Cgl1094 KEGG:ns NR:ns ## COG: Cgl1094 COG0448 # Protein_GI_number: 19552344 # Func_class: G Carbohydrate transport and metabolism # Function: ADP-glucose pyrophosphorylase # Organism: Corynebacterium glutamicum # 3 388 6 392 409 462 62.0 1e-130 MAKTRPKVLSIVLAGGEGKRLMPLTMDRAKPAVPFGGTYRLIDFVLSNLANSGLTQIAVL TQYKSHSLDRHISITWRMSTMLGSYVTPVPAQQRLGPRWYQGSADAIYQSLNLINDQSPD YVVVFGADNIYRMDVDAMLQYHIDSGLGCTVAGIRVPRKDASAFGIIDADQNHKITEFLE KPADPPGLPDASDESFASMGNYIFSREALVQALHDDAHSADSRHDMGGDVIPRFVNAADA QVYDFRDNEVPGNTEKDADYWRDVGTIDAYHDAHMDLVSVEPEFNLYNPDWPIWTMQEQA PGAKFVMRGSCDDTLVSAGCIISGTDIYRTVLGPRARIERWARVDESIVMNNVAIGSNAT VHRAILDKNVIVPDGAQVGVDHDHDRARGFTVSPGGVTVVGKGITVPY >gi|302034501|gb|GL383250.1| GENE 101 94347 - 95000 605 217 aa, chain - ## HITS:1 COG:MT1258 KEGG:ns NR:ns ## COG: MT1258 COG4122 # Protein_GI_number: 15840664 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Mycobacterium tuberculosis CDC1551 # 16 216 14 214 215 127 38.0 2e-29 MSPAQPRHQVPDARSWEYADGFVAPSPALQEAREAARADQWEVLGNGTTALLTFLARTMQ AGSVVTIGTDAGVSGLALLEGMTDHGVLTSIDPDAERQAAARKVLSLARIRSNQVRLITG TPLDVLPKLRDGAYDIVLINGDRLEYVEYVSQALRLLRPGGVVVVNDALANNHIADPDNE DDDTLIIRETLDSVLETEEFTPVLLPVGEGLLLATKS >gi|302034501|gb|GL383250.1| GENE 102 95070 - 95951 876 293 aa, chain + ## HITS:1 COG:MT2823 KEGG:ns NR:ns ## COG: MT2823 COG0329 # Protein_GI_number: 15842291 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Mycobacterium tuberculosis CDC1551 # 3 284 9 289 300 241 51.0 2e-63 MSAPVFGRLLTAMVTPMTFDGAVDLRRTGELAHKLVEEQNNDGIVVNGTTGESPTTTDSE KAEIVKAVVEAVGSDAAVVAGVGTNDTAHTIELAHQAAEAGADGLLVVTPYYSKPSQAGI IEHFTAVADATDLPIMLYDIPGRTGTPIETKTLIELADHARIVAVKDAKGLVVESATVMA STTLAYYSGDDAITPALLSVGGVGLVGTSTHFTGRRMHEVIDAYVDGRIDEALSTYREIL PVLTGVFAAQGATMVKAGLAHQGFTVGRVRPPQTMPTPEQAETFFGVLDRTQL >gi|302034501|gb|GL383250.1| GENE 103 96002 - 96415 420 137 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3710 NR:ns ## KEGG: HMPREF0675_3710 # Name: not_defined # Def: putative twin arginine-targeting protein translocase TatB # Organism: P.acnes_SK137 # Pathway: Protein export [PATH:pak03060]; Bacterial secretion system [PATH:pak03070] # 1 137 1 137 137 241 100.0 5e-63 MSTAGPAEIAVLIVIAVLMFGPDKLPEMARKAARIYHYLKDIANNTRDQLRSELGPQFAD LDYQDLKPQNFVRKYVLDSLQDDIDEIKADLSDVRSDLDLGLADIRNSEGLPETPVSAPS SVVHDEAVPVPFDLEAT >gi|302034501|gb|GL383250.1| GENE 104 96568 - 98142 935 524 aa, chain - ## HITS:1 COG:no KEGG:PPA0644 NR:ns ## KEGG: PPA0644 # Name: not_defined # Def: endoglycoceramidase (EC:3.2.1.123) # Organism: P.acnes # Pathway: not_defined # 1 524 1 524 524 1015 100.0 0 MYHHSWHSPDARRRGVTRWATTFIAALTAACMAQMPAQASPHTSDAAPHIATSKTITDAG PIGQSGRWYTDGQGRAILTAGVNMVSKRHPYSPEADGFDDADAAWLQKNGFDSVRLGVIW KGVEPKPGEYDDAYLASITRTVRTLRAHGIMTLLDAHQDMYNEKFEGEGAPDWAVLDKGA PNLLKVGFPANQVFNLGLIKAYDSFLDNAKGPGGVGLQDRYAAMWKHVAQVVGQEPGVMG YDIINEPWPGHHYPICYVAFGWCGRAMVSLDTLYEKVGRAITSVDPDGIVTYEPYSTWNM GLDSRPARPSSPKAAISWHVYCPMNAIFGSYVGCNLPDTRTFHNADQAAQFNNSASLLSE FGATKDPGTLMGVTSKARAHLVGWLYWTYNGNSDPTTQNAADEELVRHINRPGPVTDEQV DHTKLAILAVPHLRAAAGTPTSTTWDQSTRTYQATWTAKRVAGDGDFAAGSVSEIAVPAI HYPNGYKVEVKGAKVISKAGDTRLQVSSTGEGPVSVTITPAGQA >gi|302034501|gb|GL383250.1| GENE 105 98198 - 99358 1012 386 aa, chain - ## HITS:1 COG:ML1080 KEGG:ns NR:ns ## COG: ML1080 COG0489 # Protein_GI_number: 15827530 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Mycobacterium leprae # 10 383 14 380 383 342 51.0 8e-94 MSTENPVVKAIADALSHVNDPEIKRPITDLNMIDEITVDEQGRAFVRILLTVAGCPLKTE LREQATEAVRSVDGVTSVSVELGTMTDEQRDALKVQLRGDVPERVIPFAQPGNTTKVIAV SSGKGGVGKSSVTVNLALALAQLGREVGLLDADIYGHSVPDMLGLGDAHPTPLDDMLLPV PGLGIKSISIGMMKPNKSDVIAWRGPILDRALTQLLADVHWGDLDYLLIDLPPGTGDIAM SLGQKLPNAEVLVVTTPQQAASEVAERAGTMAGIMQQRVLGVVENMSWLEVTAPKSRETF RVELFGTGGGQKAADALSERLGTTIPLLGQIPLDVELRSGGDDGDPIVITHPDSPAAEAI TELAKTIDARPRGLVGINLGVQPVSH >gi|302034501|gb|GL383250.1| GENE 106 99420 - 99935 484 171 aa, chain - ## HITS:1 COG:Cgl1100 KEGG:ns NR:ns ## COG: Cgl1100 COG4420 # Protein_GI_number: 19552350 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 8 166 1 157 193 154 50.0 8e-38 MADNDQWLHDADRLDIPGPRKVKRPRVQLDSEKFGQFAEATARFMGTAKFLVYMTVIVCS WVIWNLVAIYKLRFDPYPFILLNLFFSTQASYSAPLILLAQNRQEDRDRVSMAEDRRVAA QSRADMEFLAREVASIRMQMGELATRDYLRSELRDELRSLLEEIEASPASH >gi|302034501|gb|GL383250.1| GENE 107 99928 - 101142 875 404 aa, chain - ## HITS:1 COG:Cgl1101 KEGG:ns NR:ns ## COG: Cgl1101 COG2239 # Protein_GI_number: 19552351 # Func_class: P Inorganic ion transport and metabolism # Function: Mg/Co/Ni transporter MgtE (contains CBS domain) # Organism: Corynebacterium glutamicum # 6 390 23 417 430 303 45.0 5e-82 MDASGDQVGKVRDVVVQMRTPGRAPLVRGLVVELFARRRIFVPMVRVHAIDAVQIMISGT VNTRVFSRRVSETLVIEDLFDRTFRRNGTPVWVMDVSMAPVRSREWEINEVALAESGRSR FIRKAPSNPTIVDWREVPSLVLASRQSTERTIAEMHEMKPADMARELHDMNPHRRAEVAM ALDDDQLANAIEELPEDEQVSLITVLDPDRAADILEEMDPDDAADLIKELPDTTAHQLLA RMEPDDADDVRSLMAYDEFTAGAMMTPEPVIVAADATVADALALVRNEDITPAEASMVFV CRPPTETPTGRYLGAVHVQRLLREPPSTMVSAIIDSDLEPMHTDAPVGAVSRYFATYNLV VVPVVNDANQLVGAVAVDDLLDHLLPADWRGDQMDGEFVEVNHG >gi|302034501|gb|GL383250.1| GENE 108 100994 - 101299 79 101 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MACTRTIGTKIRRRANSSTTSPRTSGARPGVRIWTTTSLTLPTWSPLASMTGRPRIREMN TDWDLFTPQNIPRRQTLTLRDESKKLSVLTRKLMLTSRRKP >gi|302034501|gb|GL383250.1| GENE 109 101299 - 101808 526 169 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3715 NR:ns ## KEGG: HMPREF0675_3715 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 169 1 169 169 286 100.0 3e-76 MLSVVPGRASAIFNLEYPQSVVVVDDYATAQKIVDQLSDKEFPVENLCIVGTDLKTVERV TGRRTWGSVLGQGAVSGLGMGLLVGLMMMFFTPGGAVLSLLLTGLIVGVVIGMITAAITY SMSGGERDFNSVQQVVATHYEVLAEHKVAAQAREMVSDMPFMRAKAFEG >gi|302034501|gb|GL383250.1| GENE 110 101922 - 102794 619 290 aa, chain + ## HITS:1 COG:no KEGG:PPA0649 NR:ns ## KEGG: PPA0649 # Name: not_defined # Def: putative cytochrome oxidase assembly protein # Organism: P.acnes # Pathway: Oxidative phosphorylation [PATH:pac00190]; Porphyrin and chlorophyll metabolism [PATH:pac00860]; Metabolic pathways [PATH:pac01100]; Biosynthesis of secondary metabolites [PATH:pac01110]; Two-component system [PATH:pac02020] # 1 290 1 290 290 495 100.0 1e-138 MANTVTTRNAVPRGVVVLFAVTAVAITVTLALGSTVCATDASASCPNWPGCYVGRLTPLD ATQPWVEFIHRVISASVGLFALASVIVGMVYRHADKLLAALPIVALLGALTSGVFGMMTI KWGINSVEASFDLLAAIISMGAMWRAYFVARKPRSSWRWNGRTKLGIGAVAFLVIGHFFA VQVAGCGSLTRCMGWAMFVRGAGDGPFAGWIAQQAIMGIGMLLAIVSLVARWGRRNGWDI LCAVFIVIELVVGVLIAVNGSSHGLGTLHAIPAVLILCLTMTATMRSARG >gi|302034501|gb|GL383250.1| GENE 111 102825 - 104321 1220 498 aa, chain - ## HITS:1 COG:HI0816 KEGG:ns NR:ns ## COG: HI0816 COG0006 # Protein_GI_number: 16272757 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Haemophilus influenzae # 82 489 40 428 430 185 31.0 2e-46 MTETRSTELNEQLRQAEKQRIPKRQTPFSKAFVEFIPTDWAPYPDELPEPLSSAPSATAH RDALAARFDSDRLVIPAGHLMRRNNDCDYPFRPNTAFAYYSGLGTDREPNAVLVVDTTAE TRDVLYFKPRAPRTDREFYADPTYGEMWVGQRESLEEMAAMTGLVCRDISQLDDALSTGD ATVRVIRDADETVTATVDSLRPRGSEDADDEFYEFSSAARFCKDDWEVEQLRDACRKSKV GFESMIAEIPEAVRKGRGERWMEGTFGRVARHLGNEVGYGSICAAGDHANTLHWVRNDGD LRPGELILIDAGIEVDSLYTADITRTLPISGTFSPAQRRVYQAVLEAQDAAAAVAKVGHD HAEIHQAAIRVICEYLHEWGILPVSVEESLSPEGGQHRRWMVHGTSHHLGLDVHDCNQAR RQDYSGPLKKGMCVSDEPGIYFKQTDLLVPEEFRGIGVRIEDDLCITDGEPEWLSKDCPR QVDEIEAWMQEIWGRACH >gi|302034501|gb|GL383250.1| GENE 112 104615 - 105016 193 133 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|332675061|gb|AEE71877.1| ## NR: gi|332675061|gb|AEE71877.1| hypothetical protein PAZ_c06890 [Propionibacterium acnes 266] # 1 133 1 133 133 184 100.0 2e-45 MKVLKLAALTLAAILSATASACTKTPHKSSPENTSLAISDLPGRPISDVGARIRKDTSLY VQDASPIVGMKPSYNASQQSSDQWTILAACADETSVETSHKIQVSVIPTTKISPSIRKSI SSHRFNYTVDCSE >gi|302034501|gb|GL383250.1| GENE 113 105013 - 105186 86 57 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|332675062|gb|AEE71878.1| ## NR: gi|332675062|gb|AEE71878.1| hypothetical protein PAZ_c06900 [Propionibacterium acnes 266] # 1 57 41 97 97 116 100.0 5e-25 MAAGKVWTAWPTGNLWQYRINKRVHERRSDGMDYDGGTSDLLKAFDPSQTRISCGLR >gi|302034501|gb|GL383250.1| GENE 114 105813 - 106583 624 256 aa, chain + ## HITS:1 COG:Rv2229c KEGG:ns NR:ns ## COG: Rv2229c COG1579 # Protein_GI_number: 15609366 # Func_class: R General function prediction only # Function: Zn-ribbon protein, possibly nucleic acid-binding # Organism: Mycobacterium tuberculosis H37Rv # 12 251 1 239 245 67 28.0 2e-11 MSTGPRNEEASVKAAAQDQWKLLDLAQTDRRIAQAEHRRRTLPELAELKDLAVQRRTLAE EVVAKSTALSDAKMEQERIEGDLEPARARMERNQKTVDAGTITDHKALRGLTEEIEHLGR RISRLEDDELDAMQAVEDAERAHADADRRRIELDGHIRTVLASRDAGLKGIDDELSELRR VRQTQAGGIPTDLFKLYELLRERTGMGCAKLVHGVCEGCGIATNAADLRRYEAAGDDEVV RCEECDRILVRTGESI >gi|302034501|gb|GL383250.1| GENE 115 107043 - 107333 69 96 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|328752951|gb|EGF66567.1| ## NR: gi|328752951|gb|EGF66567.1| hypothetical protein HMPREF9563_02204 [Propionibacterium acnes HL020PA1] # 30 62 1 33 39 71 100.0 2e-11 MWLWSVMGRRVVRINSSWNCVLSGKSWYPMRNVHGHEFTHAAASCGAMREPNLLRADPAL CGSRLSLCDGWCGAGALHRSAGTNHGSPSIVTTRTD >gi|302034501|gb|GL383250.1| GENE 116 107364 - 107621 57 85 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSIAPLSVIALAVPAAAGAAFFLLRCGCWSCCNGSRDSKGCGHHDCFSRAAKCRERWPGC GGSTPRIIQLTAHERDHMRCRITVE >gi|302034501|gb|GL383250.1| GENE 117 107688 - 107882 249 64 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3720 NR:ns ## KEGG: HMPREF0675_3720 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 64 1 64 64 101 100.0 1e-20 MVKPMKYRKLVGLLREAGFTPTQGKGDHEKWRNGTTWTIITQTTECSPKVVKDALDAIER SKQQ >gi|302034501|gb|GL383250.1| GENE 118 107879 - 108250 378 123 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3721 NR:ns ## KEGG: HMPREF0675_3721 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 123 1 123 123 172 100.0 4e-42 MNSLIVTATRWSGGWELEIGEQQHTQVRNLCNARQQVVDYLDTMDESVDHADVDITIIPE IGALADEVAQAREATRAAAEATEMAARQSRAAAQHLRAAGYSVSDSAVIMGVSRGRVSQL VNL >gi|302034501|gb|GL383250.1| GENE 119 108744 - 109757 885 337 aa, chain + ## HITS:1 COG:FN0885 KEGG:ns NR:ns ## COG: FN0885 COG0614 # Protein_GI_number: 19704220 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Fusobacterium nucleatum # 61 337 18 286 286 155 33.0 1e-37 MPATPKFLRRAVAVSMLPVIMLAGCAGAPKDSSASSSASASQSNAGPITITNCGQKVTLD KPATRAVTLNQGATEDVLAIGGESKLAGTAYLDSGIPKKWKKAYDSVKVLAKEYPSKETF LSAKPDLAVSSYSSAFTDKAVGTREELKKQGIATYISPFGCPKGTPSAEATWENVWKEMR EVGTLIGQKDAADKVIAEQRMSLKEVSGNKHGNGTSIVWFDSGDKVPFIGAGHGGPQLLM DAVGAKNLFANLDGGWADGSWEKIVGSNPDVIVVADADWSTAKDKIAYLKKDPVLSQMKA VKDNKFVTVPFSQTTPGAELVDGAKTLNDGLARVTGK >gi|302034501|gb|GL383250.1| GENE 120 109754 - 110788 582 344 aa, chain + ## HITS:1 COG:FN0884 KEGG:ns NR:ns ## COG: FN0884 COG0609 # Protein_GI_number: 19704219 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Fusobacterium nucleatum # 60 343 64 341 345 167 36.0 2e-41 MSRWRSWLLLGIVVAALIGSALVVLGIGAVRVPVSDVARVVARRFRLIEGADVTVLNDQI VWQMRAPRVIGSMAVGALLAMCGAVLQTLTGNDLADPYLLGISSGASVGAVFVLIVGISS TLGQSVLMTLASFIGAVVALVMVLTMATGRSGELPAGRTILAGVAVGQLCGAAVSVMIMI FGESNAARSALSWTLGSFAGLRWGSTITLVVATVPALVVGMALCHILDAFAFGDISAMSL GVPVNTVRWAIMVSTALLTALSVAFAGPIGFVGLTVPHIVRFWTGSRHARLLPISALAGA LLMVWSDTAARCLRPDTEIPVGVITAIVGAPVLVVLLRRQASRS >gi|302034501|gb|GL383250.1| GENE 121 110785 - 111582 199 265 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 24 229 16 221 245 81 28 4e-14 MTTVTTSAVLRAEALGWSVDGKTILSGVSVDVRPQMMTMIIGLNGSGKTTLLHLLAGLRK PGMGRVWLGKRDLARIGAKERSRMMALLEQNPSAHVELTVRDVVQLGRIPHLGRWRMGNL SRRQGHDDDVVEKAMATTGVSELTDRAWSSLSGGERQRVQLARALAQEPEILFLDEPTNH LDLPHQIDLLERVRGLGLTTVTVIHDLDLAAAYADDLIVLDSGRMVAGGPASTVLTPDLV RDHFGVDGEVWSSSRRGFTWNGLQT >gi|302034501|gb|GL383250.1| GENE 122 111579 - 112199 291 206 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3726 NR:ns ## KEGG: HMPREF0675_3726 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 206 1 206 206 405 100.0 1e-112 MTTRIAVSLRWDDAIDLDRAMTQQVAADCTAHLQGPGPTLIDVLDSIDDTRIELVGWSSE DGPVPLSWLRRVAGQWVRDHADGPNVVVHAGAVRPGQTISNEWRAVTGSEAPLRSPAWQE FPPFRHHLLACRGPRCNAAGAADLHARLKDKLAHALDTEILVTVTGCMFPCNHAPLIIVW PDGRCIQLTADNLDRIVEDLIGPSRQ >gi|302034501|gb|GL383250.1| GENE 123 112234 - 112449 80 71 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3727 NR:ns ## KEGG: HMPREF0675_3727 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 71 1 71 71 116 100.0 3e-25 MTAAPQHQPTDPLWRRCWSSLRWWVRGVTGADAYDNYLEWCRRTRHEPMSEKAFWRDQCD RQDRNPQARCC >gi|302034501|gb|GL383250.1| GENE 124 112446 - 113087 610 213 aa, chain - ## HITS:1 COG:MT3149 KEGG:ns NR:ns ## COG: MT3149 COG1966 # Protein_GI_number: 15842631 # Func_class: T Signal transduction mechanisms # Function: Carbon starvation protein, predicted membrane protein # Organism: Mycobacterium tuberculosis CDC1551 # 27 188 582 743 758 131 48.0 8e-31 MEGWLLADYRDHGGWLGLDSAHGRHRNTLFPLFGIANQLLAAVALSICLVIFARAGHTWR LLIIFVPMLFTAIITVYGSWLKIFSPDPKLGYWANHMTYKRAIADGKTSLGQAKNIDEMH TVVGNTAIQGTMSIIFVVCALIVMIVACIRTVQALRGRNIIDTEDPAKPSKIFAPSGLMP TKAERDLQVEWDAFYEEHPELDLESVHKDKEHA >gi|302034501|gb|GL383250.1| GENE 125 112937 - 114715 1283 592 aa, chain - ## HITS:1 COG:Cgl0635 KEGG:ns NR:ns ## COG: Cgl0635 COG1966 # Protein_GI_number: 19551885 # Func_class: T Signal transduction mechanisms # Function: Carbon starvation protein, predicted membrane protein # Organism: Corynebacterium glutamicum # 43 579 41 580 759 612 61.0 1e-175 MDTVPPRTYNNSNFPEGLPAVSLSDEERARQQRWTPLRVTIWILISAIAGLGWWMLAVRR GETVNGIWFVFAAIGSYFIGYRFYAKYIQDKLVHPDDSRATPAEYDYNGRDFVPTDRRIL YGHHFAAIAGAGPLVGPVLSAQMGYLPSTIWIIVGVILAGAVQDYLVLVISMRRGGRSLG QMAREELGRFGGIAALIATLTIMLIIVAILAMVVVNSLAASSWGVWSVGLTIPIALLMGF YLRYLRPGKVFEVSIIGIVLLVLAIASGAWIENTAVASALHLSKPFLAWAIIIYGFIAAV LPVWMLLAPRDYLSTFMKVGVIAMLAISIVIVRPVINVPAMTVYATNGAGPVFSGKLFPF LFVTIACGALSGFHATISSGTTPKLIEKESQARLIGYGGMLMESFVAIMALVAALSVDRG IYFAMNSPAGATGNTVKSAIAYVNSLGLSSVHANANTLTTTAKLVGETSIVSRTGGAPTL AVGLATIMHKIFGGEAMMSFWYHFAIMFEALFILTSVDAGTRVARFMLSDALGNFWPRLK DHSWKVGSWLTTAIMVAGWGSILLMGVTATLSSRSSALPTSCWQLSPCRSAW >gi|302034501|gb|GL383250.1| GENE 126 114918 - 115091 58 57 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3729 NR:ns ## KEGG: HMPREF0675_3729 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 57 1 57 57 93 100.0 3e-18 MLVHVKVLSRDRIVGEGPTTDVLSHPRGECTRAVAGAVTIPDLAIQRARRTQAAVKP >gi|302034501|gb|GL383250.1| GENE 127 115098 - 115952 542 284 aa, chain - ## HITS:1 COG:MT2929 KEGG:ns NR:ns ## COG: MT2929 COG0024 # Protein_GI_number: 15842403 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionine aminopeptidase # Organism: Mycobacterium tuberculosis CDC1551 # 2 283 5 285 285 333 59.0 2e-91 MSAIKPYPQSPRRHVPGNIARPPYVGLGDVPETYDGSHVQSAETIAAMEEAGRIACGAMY EAGKAVEPGVTTDELDRIAHEYMCDHGAYPSTLDYRNYPKSCCTSVNEVICHGIPDSRPL EDGDIVKIDVTAYKNGVHGDNCYTFGCGNVDQASLDLIDHTQQAMNRAIKAVKPGRSISI IGRIIENYAKRFGHGVVRDYTGHGVHSAFHSGLVVFHYDEPRYDVTLEEGMTLTIEPMLT LGDQSNHQWDDGWTVLTNDGSRCAQFEQTLVVEKDGARILTTLE >gi|302034501|gb|GL383250.1| GENE 128 116356 - 117225 526 289 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3732 NR:ns ## KEGG: HMPREF0675_3732 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 289 1 289 289 475 100.0 1e-133 MASGPQAGWYRDPDGTPDRYRWFDGERWTDRTTTSPDPAPQHSGKGHREHDNGRSSSWLW AIIIVILVVAVVVAFALHRSTSSDHNAEPDLNSSSPTVSAWNEKSTTPSASSSAVTCPRG QHPGNQDSNDGRLHGGGVSVESIPNWRHENLTLPWVMGQSAQIDDVYPGWMSVSGVGGLP VAEGFSDPQTAATMMMDCFASSDYYAGYTGEKEIRSEALTIDGHPAWWKRSEVYVSLPSL PQVRGDVVDVVVVNTGQTDFLGMYFNSATIGDSTRQTLVDHARQSLKVD >gi|302034501|gb|GL383250.1| GENE 129 117329 - 118630 989 433 aa, chain + ## HITS:1 COG:MT2280 KEGG:ns NR:ns ## COG: MT2280 COG0174 # Protein_GI_number: 15841714 # Func_class: E Amino acid transport and metabolism # Function: Glutamine synthetase # Organism: Mycobacterium tuberculosis CDC1551 # 1 430 12 444 446 563 63.0 1e-160 MEERNIRFVRLWFTDVLGSLKSVAIAPAEVEGAFVEGVGFDGSAIEGYARVYEADMVAHP DPATFQVLPWRSGTSTARMFCDITNPDGTSSAADPRHVLKRTMGRAAEMGFTFYVHPEIE FYLLNDEHHPGESPVALDNGGYFDHTTLGAGTDFRRDAINVLEQMGISVEFSHHEAAPGQ HEIDLRYADALTMADNIMTFRVVIREIASLKGIKATFMPKPFTDHAGSGMHSHVSLFEGD TNAFYDAADEARMSPVAKYFVAGLLHHAPEIIAVTNQWVNSYRRLSGGGEAPNYICWGRN NRSALVRIPMYKPDKASSARVELRSIDSAANPYLAYSLVLAAGLDGIEKELPLPEEASDD VWQLSARERHALGIKQLPQSLGAAIRCMEESELVAETLGEHVYDYFLRNKRAEFEEYNRQ VSQFELDRYLPHL >gi|302034501|gb|GL383250.1| GENE 130 118649 - 119452 367 267 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3733 NR:ns ## KEGG: HMPREF0675_3733 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 267 14 280 280 469 100.0 1e-131 MAARAERSVKRLATTWVATARCLLPQPNTDPLDPGEAQLWGRHHIAHLMVIFTDTLQTVT TPTTIRPMTLARVIDERRKATNTLAAIGHEVIADDTASRLASQAQRLLDNVESVLLATPG PPATVDSLVGPVRVTDQLRATLLAMAAMGLHDGIDIPSGAIIESCRTLSAVLDETHGGRT IELRVPPACAVQLAAIESGPNHHRGTPPNVAETAPVTFLQLATGFSHWPEMRSAGRVQAS GSHVDDVAGVFPVVDMAGVFRDIFADD >gi|302034501|gb|GL383250.1| GENE 131 119582 - 122533 1681 983 aa, chain + ## HITS:1 COG:Cgl2179 KEGG:ns NR:ns ## COG: Cgl2179 COG1391 # Protein_GI_number: 19553429 # Func_class: O Posttranslational modification, protein turnover, chaperones; T Signal transduction mechanisms # Function: Glutamine synthetase adenylyltransferase # Organism: Corynebacterium glutamicum # 52 981 58 1035 1045 646 41.0 0 MDRKSSVTIDLLRLGVMDTDAASANHHRIAENIGADPNRLADWEHHLETCCDPDLALNVL AELAQDSAQCLGEVLDHDASACRLVRLLGASSELGRHLIAHPDDLAEVIRDPVRLGHDEI CDDLLEVVGAHKEGEFTVAGTPTGPASDRLRLANRRHLVRIASRDVSADDPTEIIEDVAA ELADLADGIVTAALALARADCPDHADARLAIIAMGKCGAQELNYISDVDVMYVAEPANDD VSGASAVTIATKLAASVARMCSAHSGAGSIWQVDAALRPEGNAGPLVRTMDSMRTYYEKW AKNWEFQALLKARPMAGDLDLGQRFVEMVSPMVWQVGEAEGFVPETRAMRTRVVSLIAAK NKGREIKLGAGGLRDVEFTAQLLQLVHGRQDESLRVRATLPALRALAAGGYISRGAAERL KEAYRLERVMEHRVQMFRLRRTHLLPDDEDGLRRLARAVGLRTADEVRRVWTATSKAVLR AHGQVFYSPVVEAVARIPTQDLRMSAEAAKVRLSALGFHDEDAGLRHIEALTSGTSRAVR IQTALMPAMLAWLADGPSPDHGLLAFRQVSEALGESPWYLRALRDEGAMAQRLAVVLSTS RYAVDVLTRAPETVQVLVDDDLTPLSREDLARQMNAVARRHHDVEEAVGAIRAVRRRELF RILVADILNVTGIRRIGQALTDLTGATIDAALTAVSREVEDAPPIGIVAMGRWGGQELSY ASDADCLFVVGDGPGVGEKALKIVTKLRNLLCKHGADPAVVLDADLRPEGRSGPMVRSLE SYRKYYGKWSSTWESQALLRASHGAGDRELTNELLEYVDQVRYPADGLTGSQLAEIRKLK ARMESERIPRGVDPRRHLKLGPGGLSDIEWTAQIIQLQHAGHDPALRTTSTIDALNAALA AGYIDEGQHAKLCDSWLAASRLRNAIMVVRGRPSDVIPSDSTDLDVIAKASGMGQGASEH LVEDHLRHCRRASRVVDAVFWNQ >gi|302034501|gb|GL383250.1| GENE 132 122527 - 123849 904 440 aa, chain - ## HITS:1 COG:yjjP KEGG:ns NR:ns ## COG: yjjP COG2966 # Protein_GI_number: 16132185 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 263 1 277 277 71 27.0 3e-12 MTSTDPHDYRDDIRHDREFVNDTEAVIRLGSMLLSSGTGSYRVKRAMCDAGLALGIDRLD ASVSLTEITATAHRGDNFRTVAREVYRVRVDSSRIAALEDLAHNLPAGTTGRELESRLDY ISRTVRPKWAEWQTVLAGGVACAGFAILNKFSLADSLVVLAAASVGQFVRGRLNRRWLNQ FGVAALASAAACLIYLMLADLLTNTGLHTIHGPGYVASLLFLVPGFPMITSILDMVRMDF TAGLSRATYSVGLILAATMSAWVFSAATGLQPLPAQTVFPYPWAWFAYAVATACGVAGFA ILFNSSPCTVAWAAALGACGNLCRLALVGVNLPAQLAAGVGGIVIGFLASPLSVRTKLPR ITLTVPACVIMVPGASMYRTVYWLNGQDMTKALTFGVDAVLTVILIACGLAVARMCTDPA WARNLPVPSPHAFKFSEDNH >gi|302034501|gb|GL383250.1| GENE 133 123856 - 125037 640 393 aa, chain - ## HITS:1 COG:Cgl2188_1 KEGG:ns NR:ns ## COG: Cgl2188_1 COG0327 # Protein_GI_number: 19553438 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 18 137 4 123 123 147 59.0 3e-35 MADNSSRTSIPQSCSDQITVSQVRATLDQWYPPSLAESWDAPGLVCGDPDDTVKRIVCAL EATDTVVDAAIEAHADMLVVHHPLLMRGATSVAADTPKGRIVHRLIRHRIALMSAHTNAD AAVGGVNDVLARLLGVTVECPLEPAAQPVDLWGVQVPVDAAEALRNALFGAGAGQFDGYD LCSFESVGRGQFRPLSGSHPALGTTNQVETVEEVRIHVVAPAMMRSTIRKALVDAHPYEV PAYDVKTIDSGSRPGPATPGIGRIGHLDEPMTLRSFTQRVSERLPHTVWGVRTAGNPDQL ITTVALCSGAGDSLLDAAAASGADVYLTSDLRHHPADEHLRANGPALIDTAHWASESPWC ADVARRLHDELGLPCQDLGIRTDPWTIGTTVAQ >gi|302034501|gb|GL383250.1| GENE 134 125223 - 126287 386 354 aa, chain + ## HITS:1 COG:lin1003 KEGG:ns NR:ns ## COG: lin1003 COG1434 # Protein_GI_number: 16800072 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 82 346 80 333 344 116 31.0 7e-26 MGRGEMMIGLALCVVPLAFYAWLVDRRPGAWSNGIVLAVGLGMAGLTAAGIIVRTVPVIG SLIVGTLVVVAALGTAVLPFLLIVNGVEMWRKEGRSLSNVLSGALGVGLLVLMAWCLRSV FSPFEPWAVAGISATMALGWLSFGFLGYLASVFVIHRAKPLPGNHQIVVLGSALVKGKVP KLLASRLDRGIGQWRTDRDAGFHSVIIPSGGKGDDEPRAEGEAMAEYLVEHGIPRECVVV ENQAANTDENISLSRQVMPTQVRSVPSRRAEAARQRQNPQVVVATSSYHAVRAAELCRRQ GLRVRVLGAPTATYFLPSAMLREYIALLASRPWINGIMLVLVLAFWPIVTMALR >gi|302034501|gb|GL383250.1| GENE 135 126530 - 126937 175 135 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3739 NR:ns ## KEGG: HMPREF0675_3739 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 135 1 135 135 251 100.0 6e-66 MAFSDVDAALGARITVLTIRNCGSSVMILPVMPQLRQITEAGARVPVAWQPYDPKARSKR LAPGKVTSWELSWHSNGDCEHRGAWRLEAKVGTTTAMLVGCLDLGSSYALTGESSTGPGG SDAVPVPEAAVRWSD >gi|302034501|gb|GL383250.1| GENE 136 127019 - 128386 1237 455 aa, chain - ## HITS:1 COG:ML0925 KEGG:ns NR:ns ## COG: ML0925 COG0174 # Protein_GI_number: 15827444 # Func_class: E Amino acid transport and metabolism # Function: Glutamine synthetase # Organism: Mycobacterium leprae # 2 455 21 478 478 657 68.0 0 MIDVRFCDLIGIMQHFTVPAREFDKDQYENGLAFDGSSIRGFQKINESDMALLPDPTTAW IDPFRERKTLIVNFNVHDPITKEAYSRDPRNIARKAEAYLASTGIGDTAFFAPEAEFYVF DDIRFDTRQNTSYYSIDSEAGAWNTGRTEDGGNRGYKVKYKGGYFPVAPTDHFGDLRDEI VTIMERLGMKVERAHHEVGTAGQAEINWRFDTLSRSADDVMKFKYIVKNVAWQHGKTATF MPKPIFGDNGSGMHVHSSIWKGGEPLFFDESGYAQLSDMARYYIGGILKHAPSLLAFTNP SANSYHRLVPGFEAPVNLVYSQRNRSACMRIPITGPNPKAKRVEFRCPDPSANPYMAFAA LLLAGLDGIQNKIEPPAPVDKDIYELPPEEHAAMDHVPGNLGAVLDNLEADHEFLLAGDV FTPDLIETWVELKRGDLAALQQRPHPYEFDLYYDI >gi|302034501|gb|GL383250.1| GENE 137 128342 - 128527 88 61 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLHDTDKVTEADIDHLDALLLDIGKQVVGTFEHLSSINMTGDVLYGSSYELLDRHCCVSS V >gi|302034501|gb|GL383250.1| GENE 138 128554 - 128976 331 140 aa, chain + ## HITS:1 COG:no KEGG:PPA0672 NR:ns ## KEGG: PPA0672 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 140 16 155 155 235 99.0 4e-61 MSGTEAAPGVSIGLPAEGRGSLASWCKRIGALIIDWGASMVLASAIFGPAVIRGGGWPMW MPMAVFFVESVLFTAMTGGSFGQIVARVAVVRLDDLGPVGWWRAVARTAMKCLVIPAVVI GAERRGLDDLVLGTVVVNRK >gi|302034501|gb|GL383250.1| GENE 139 128991 - 130094 638 367 aa, chain + ## HITS:1 COG:TM0622 KEGG:ns NR:ns ## COG: TM0622 COG0438 # Protein_GI_number: 15643387 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Thermotoga maritima # 156 356 152 368 388 94 31.0 4e-19 MVLSRGIPSPEAPLRGIFEYDQAVALHQQGHEVILAVLDARSVRHWRKFGTRVEHAVDRN DGMTVVRLDVPLGAASARIDHRVHAIAARHLHRIVTSQWGIPDVSHAHFARFAAAAARAG FPEPLVWTEHDSHLAHPDQRLNEDIIIAGDRADAVISVSQGLCDRLAGHGVTSTVVPNIV DVELFDRPDRRHEGTIVVSVATLNPGKGMIELAQAVERLPEVQLRIIGDGPQRHQLEAIA AGNPRIVLLGPQSRDRIAEELAGADAFALASHAETFGVACAEALAAGLPVLTTACGGPQE FIDDSNGVVVPIGDVDALTEGLCQVLARSWDHEQIAGYVRSRFAAAPVVDQLETVYRKAV ADHGMAG >gi|302034501|gb|GL383250.1| GENE 140 130118 - 130726 424 202 aa, chain + ## HITS:1 COG:Cgl0276 KEGG:ns NR:ns ## COG: Cgl0276 COG0586 # Protein_GI_number: 19551526 # Func_class: S Function unknown # Function: Uncharacterized membrane-associated protein # Organism: Corynebacterium glutamicum # 32 188 27 188 206 75 33.0 6e-14 MNLTAWMASINGVIAANAPHPWVIGALWGLCVIDGFFPPVPSESLVVALAAIGHPSRWLI IPVAAAGAICGDNIAYWVGRQIGHTKLFTGGPKRQKTVAWATHQLRVRGPLCILVARYIP GGRVVVNAMAGATRFSYRVFLPIDALAGVLWACYATAIGAGAASFLGNNHILAATVGIIG AIIIGVILDQILRRLMPAPQSD >gi|302034501|gb|GL383250.1| GENE 141 130803 - 132191 1507 462 aa, chain - ## HITS:1 COG:CAC1353_1 KEGG:ns NR:ns ## COG: CAC1353_1 COG1263 # Protein_GI_number: 15894632 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Clostridium acetobutylicum # 23 426 12 370 409 324 46.0 2e-88 MAKDAVATSTKKKRQIPGFSQMQRIGRSLMLPIASLPVAALLMRFGSADVLGADGLAKHA SWMQPVADVLAGAGGAIFDNLPLIFALGVAVGYAKKADGSTALAALVGYLTFTGAGTSDK TQGGVLHALAPYFSQKTGVINYGVLGGIVIGLIAAKMYEKYRRTKLPTYLAFFGGRRLVP IVTAAASVVAGVIMAIIYPAFDWLFNKQVGGFIMAHGSNPGTGFVFGTINRLLIPFGLHH LLNSLPWFQLGNCTNAAGETLHGDITCFFSGASGTNAWTGSFMTGFFPIMMFALPGAALA IYHTAKPERKKLTGGVMISVALTAFLTGITEPLEYAFAYVAFPLYLVHALLTGSSLALCN ALGIKDGFGFSAGLTDYIINFGRASELSGGPGKVLLLILIGLVYAVIYYVVFRFAITKWN LRTPGREDEGNDTTGGASVFDEAQLAASESTGKADAQKEGRI >gi|302034501|gb|GL383250.1| GENE 142 132367 - 133092 501 241 aa, chain + ## HITS:1 COG:BH0419 KEGG:ns NR:ns ## COG: BH0419 COG2188 # Protein_GI_number: 15612982 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus halodurans # 18 226 27 238 240 141 38.0 1e-33 MKYVTVRDYLVELIDTRLSVGDVVPSERELAERFGISRMTVRQAVDSLVSSGMLERRRGS GTYVRAPKVHVQSRISSFSEEMRQRGMIPDTRVLRDEEISAAPDVAVWLGIEPGEPVHYI YRVRLADGVPMAVERTWIAARVMPDLLTDGVPASIYGAMAAAGLVPTWGEDAIEAVSGDA LVCEHLQIPVGSAVLAINRRTYADDTAISYSRSWYRGDRYKLWVPISGPHRTLYPPRGGS R >gi|302034501|gb|GL383250.1| GENE 143 133089 - 133337 235 82 aa, chain + ## HITS:1 COG:BH0844_2 KEGG:ns NR:ns ## COG: BH0844_2 COG1264 # Protein_GI_number: 15613407 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIB components # Organism: Bacillus halodurans # 6 75 8 77 100 62 38.0 2e-10 MKRVEHILAALGGVDNVVSIEPCVTRLRCQVRRCEQVDEQALRRAGAHGVTVQGHSVQVI VGPDADLLASDLEDLWEEDRES >gi|302034501|gb|GL383250.1| GENE 144 133467 - 133697 272 76 aa, chain + ## HITS:1 COG:SPy1986_2 KEGG:ns NR:ns ## COG: SPy1986_2 COG1264 # Protein_GI_number: 15675776 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIB components # Organism: Streptococcus pyogenes M1 GAS # 2 75 4 78 114 68 54.0 3e-12 MSKAEQILAALGGDDNIDDLEACITRLRVEVDDPSLVDEPALKAAGAFGVVQQGTSVQVV VGPEADTLAEDIEDLR >gi|302034501|gb|GL383250.1| GENE 145 133697 - 134191 439 164 aa, chain + ## HITS:1 COG:BS_ypqE KEGG:ns NR:ns ## COG: BS_ypqE COG2190 # Protein_GI_number: 16079281 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIA components # Organism: Bacillus subtilis # 4 141 20 155 168 103 42.0 2e-22 MTAIASPLDGTLMPLSEVPDPVFAQGLVGPGVALEPTGEGDVTVVAPVAGRIVKLHPHAF VIQAEGFGVLVHLGIDTVQLDGEGFTLHAEEGHEVVVGDPLITWNPAGVVAGGRSAVCPI VVLDASSGRIGDAAVTGERIACGDQLFQWLDFPEQDANVCAQHD >gi|302034501|gb|GL383250.1| GENE 146 134169 - 134726 433 185 aa, chain + ## HITS:1 COG:SA0175 KEGG:ns NR:ns ## COG: SA0175 COG3477 # Protein_GI_number: 15925885 # Func_class: S Function unknown # Function: Predicted periplasmic/secreted protein # Organism: Staphylococcus aureus N315 # 11 168 3 160 164 174 51.0 6e-44 MSVPSTTDRARRHPEVAALVGVVAGIFSAIVKFGWEVPFPPRTPERNATNPPQQLLEQLG FSDHFAHTLVYFNGNGLPVMSFIIHFGFAIFFGVAYCVGAERFPKITLWQGVAFGVVVYV VFHVIVMPGLGTVPAPWHQPWQEHLSELLGHIVWMWSIEVVRRDLRSRITGEPDPWVEPS MTAGR >gi|302034501|gb|GL383250.1| GENE 147 134674 - 135738 695 354 aa, chain - ## HITS:1 COG:no KEGG:PPA0681 NR:ns ## KEGG: PPA0681 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 354 47 400 400 632 99.0 1e-179 MPRPTDLKIYRDCVRAMLNDPKALYTASSVNGLGFTYPPFAAIALTPLALIPSLPVTILH YGVSAIALAIMIDLIWRRCGHKPQPLLAAIFVAVLNFSEPIGKTFVYGQVNLQLAALVVI DVFLLPRRWRGVGVGVATGFKLTPGIFALWYLVTGQFKAALRAAAAGLVTIAIGLAVMPT ASWEYWTHYMLTPNRLGGLTWAGNQSLSGMLLRLGHGNLTLVWLVLVALCCALAGIASRR LWQEGGADQVWSLLCAGLCGCLVSPVSWSHHWVWGSLIIVAGLADRRRCQQVLALIWALA TLTWMVWWFPAGRNRELTAAWWQKILTDAYEFVGVATLIVLLSSMAQPTDRARQ >gi|302034501|gb|GL383250.1| GENE 148 135840 - 137645 1371 601 aa, chain - ## HITS:1 COG:Cgl0888 KEGG:ns NR:ns ## COG: Cgl0888 COG0488 # Protein_GI_number: 19552138 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Corynebacterium glutamicum # 5 599 3 610 611 510 47.0 1e-144 MAGTNIVNADRISKSWGTRTVLSEVSLGLSTGDVIGVVGRNGDGKSTLLALLTGSLEPDS GTVTRTNGISIGVLAQAETRRDQTVRDLVVGGQPDHVWAANREARPIVEDMLSDIDLDRA MADLSGGERRRAALVSIMLGDHDLLVLDEPTNHLDVEAVAWLAGHLRHLQERGVAMLVVS HDRWFLDEICTDIWEVHDATVEAYQGGYSAYTLARVERARIAATNEAKRQNLARKELAWL RRGAPARSSKPRYRVEAANALVANVPEPRDKLELARFSATRLGKDVLDLNEVTVTVSSDE LGERTLLDKVTWSIGPGDRIGLIGVNGAGKTTLLNLFDGSRKPDSGRVKHGKTLRLAHLR QEVDDLDSAMTVLESVNDVKARTKLATGRDASATDLLEGFGFTGQKLVTRIGDLSGGEQR RLQLLRLLMDEPNVLLLDEPTNDLDIDTLRLLEDYLDSWPGTLIVVSHDRWFLERVCDVV WALMGDGTVALLPGGISQYLEHRRNRNPGPSKSSRVGSTSRVAEPKMGAAELRQARKNMD RLDRQMGKVRDELAALHEEMAAKADDYQALVDLQAKANELDERMTNLEKQWLETADIVED Q >gi|302034501|gb|GL383250.1| GENE 149 137653 - 138423 729 256 aa, chain - ## HITS:1 COG:no KEGG:PPA0683 NR:ns ## KEGG: PPA0683 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 256 1 256 256 459 100.0 1e-128 MPKSQAAKELAAKQKAQAKAEKERRKHSDNPKDWGTGKQLVETFKLTRQVDPQLLWWVIG SFVAGVVVFTVLGLILTDLWWAWLIVGIFAGAAAAMWVFQWRAKRSMYARFKGQTGSAEV ALSLLDKKKWTSTPAIAFTRQQDVVHRAVGPGGIVLIGEGHGNGLRNLLATETKRHEQVA YGTPVTSIIMGDGKGQVPLEDLDKHIKKLPKTLSTSQVDEVVNRLKALDAMRPKVPLPKG PMPSSMKGARAAMRGR >gi|302034501|gb|GL383250.1| GENE 150 138625 - 139143 204 172 aa, chain - ## HITS:1 COG:no KEGG:PPA0684 NR:ns ## KEGG: PPA0684 # Name: not_defined # Def: sialidase B (EC:3.2.1.18) # Organism: P.acnes # Pathway: Other glycan degradation [PATH:pac00511]; Sphingolipid metabolism [PATH:pac00600] # 1 172 392 563 563 335 100.0 4e-91 MPATIDLHESAITEVLPGVLRSFNRHSASSGGKVLTAESVDGGHSWSTLTSAFGDDDQGV ACQVSALMLKQTIASPTTGEQLPALIVVSADDRRRRHGIAHVAVVHRSSRTFGPRSELEW VSHADITSPQTLFAYSSIAQLSDGRVLVLFESSPTDSWADGLQRMYLQELAS >gi|302034501|gb|GL383250.1| GENE 151 139348 - 140142 465 264 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3753 NR:ns ## KEGG: HMPREF0675_3753 # Name: not_defined # Def: BNR/Asp-box repeat protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 264 59 322 563 536 100.0 1e-151 MVSTANDTLVIGCDANRATTGDSADNIDALIRRKPNASRYSISDGWEAPSLIKPLEMRDY SNKYGYAPASSSVIDGAIIEDSVRHRLMIVIDLWAWNGGVFEHLNVSPDGSVNDGRPRKF PLGDGFATVAGRDMLLLSTHNVTGDADGLRGNINLNIDRSQFDLVADLDGPRDKHGRIQI YELIGIPRPYTTAGVDDSNLALGRRSRYSLDDGFNLFEAGIPLYVFQHGSARITPMRVFY KDSILQVFNTNHIVEIYSYDDGRT >gi|302034501|gb|GL383250.1| GENE 152 140111 - 140329 128 72 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTNVSLAVDTMNGMRKKCDGEFSLLNTSSTSASCVASAGECSENCPVTLKNKAAPPEINA DRREIRWCMLNP >gi|302034501|gb|GL383250.1| GENE 153 140391 - 142706 1185 771 aa, chain - ## HITS:1 COG:PM1000 KEGG:ns NR:ns ## COG: PM1000 COG4409 # Protein_GI_number: 15602865 # Func_class: G Carbohydrate transport and metabolism # Function: Neuraminidase (sialidase) # Organism: Pasteurella multocida # 333 697 48 473 1080 160 30.0 7e-39 MTITDTYTEELAIDLTGSALMPARKGMDVQRIDGEDGSLLVEFSATSSGCLFELVGKNGR LSVDVDEDRLLGRIDLNGESRSLDAEDALGMADGTIHSVGLTADETGTHLFADGYETFSA TLRVWCQDLGATNIVINPSGVLDVRRFKMWNSALSLQAMAAKAPTATPFVEFAGSELSAR DARRIGELAHGALRARTRLRGKGQGGTVLAAQGSAGELSFEIVNGDLLLHVEVDDEPIAH VRAPGKWDDGNWHDLVAISGRGAIDLYVDGFLVAHEPGEAFFADLGKVERVTVGKDLEGA RLFGEAQTASIFSSALTDAQVKRLANVAPLRTQALFDTGYLGSKSYRIPSLIRLDSGSFI AGADQRVSIANDSPNDINFVIRRSEDGRRWDEAQIVLEYPGEGALGASVIDSVLFQDHNS GRVFCLIDQFPGGVGQPNAEPGSGFDEQGRQLLFDRDATAYVIDAEGIVTTESGEPTDYT VDETGNVFAAGAPAGNIHLATGVDPHESLLTLRTCNLILIHSDDDGRTWSRPINLNPALK QPWMRFLGTSPGNGIQLEHGTHRGRLLAPVYYNHEEGKTFSCAAVYSDDGGQTWNLGKSP NDERELFGKIVSSRNLNDDRGSTHESALVETPDGVVHSFMRNQHPSGRVAHAASVDGGET WGEVTFVEQLTEIFSQPNAISVRDELGTESVVFANASMMLPFRGCGVLRQSFDGGKTWPH NRVLNPRHHVYQCMTQQDEQTLIVLWEREWLGLFLTEVPLSWLTTSRSTLE >gi|302034501|gb|GL383250.1| GENE 154 142779 - 144311 925 510 aa, chain - ## HITS:1 COG:ECs4097 KEGG:ns NR:ns ## COG: ECs4097 COG0477 # Protein_GI_number: 15833351 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 19 493 20 484 506 413 46.0 1e-115 MASSDDIITIKEMGDKRRWWQYLDATKWKLFIAALIGVTLDGYDFVLITLALPEIKAAFG LTLVQSAALVSAAFITRWLGGLILGGVGDRFGRKPAMIIATVLFAIGSLLMGFSPNFMFL FIMRMVVGFAMAGEYGSSATYVIESWHPRIRGKASSFLLSGYAIGAILAVQVDKYLVPWV DSWHAGWGWRALFITGIVPIAVALYMRRRLPEASDWETAKSREREKSSESRDAFQVLFSG RRMSLNITLVIAAMAGLLAIFALNILPFWGVLAVAIACGAIFVCLIVQFDPRRWVIGIGI MIVILSAFMYGWPILGLLPTYLTGAGYAASTVANLLTIAQFGNMIGYFVTGFMGDWIGML KWYFTSILIAQIIVFPLFFAGIKSAWLIGLLLFFNQLFGQGVSGLAPRWVSSYFPVEQRA AGVGFIYNVGALGGAIGPFVGASLAKSHGLGSALGVLSVGFGLIVVLGVGLNLPRKLQAL VNPEAVRPEDGDDRYINSGDLSSEFASSEC >gi|302034501|gb|GL383250.1| GENE 155 144522 - 144923 121 133 aa, chain + ## HITS:1 COG:no KEGG:PPA2405 NR:ns ## KEGG: PPA2405 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 133 1 133 133 241 99.0 6e-63 MPRTYVLDMMTHGWRIRILRCAGELRRLTRAWRLVQGAGLLTAVVADHAAISRETMNCLD DGYVHVDLDMVLNVVVTPGIKVHRHGCRPLMNGYCRSCAATLPETLGKFSRGMRVAIVVR TASERRCVLRRLA >gi|302034501|gb|GL383250.1| GENE 156 145020 - 145823 751 267 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3756 NR:ns ## KEGG: HMPREF0675_3756 # Name: not_defined # Def: CAMP factor (Cfa) # Organism: P.acnes_SK137 # Pathway: not_defined # 1 267 1 267 267 450 100.0 1e-125 MKKTHLVAPLLVGAMLVPAALSAPSAHAVEPTTTISATSTHELSASDARNSIQLLNAHIA TLQSVQKSVPGSDYSDQIRDLLKAAFDLRGLIETLAHGGIPFYDPSTIMPRIKLVATTID TIHTATTTLQNKVRPAHVELGLEVTKAVLLTANPATTAKELDAEGTALKARLEKVSQYPD LTPNDVATVYVRTNFSKTIWQVRANRDRYILGHKSAAVYKTLNHAITKAVGVRLNPKTTV GNIQAARTELLAAYQTAFNSPDVKKAA >gi|302034501|gb|GL383250.1| GENE 157 146388 - 146696 158 102 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313763865|gb|EFS35229.1| ## NR: gi|313763865|gb|EFS35229.1| hypothetical protein HMPREF9567_01664 [Propionibacterium acnes HL013PA1] hypothetical protein HMPREF9574_02314 [Propionibacterium acnes HL074PA1] hypothetical protein HMPREF9585_00741 [Propionibacterium acnes HL083PA1] hypothetical protein HMPREF9589_02405 [Propionibacterium acnes HL059PA1] hypothetical protein HMPREF9612_01852 [Propionibacterium acnes HL063PA2] hypothetical protein HMPREF9616_01689 [Propionibacterium acnes HL007PA1] hypothetical protein HMPREF9617_01788 [Propionibacterium acnes HL056PA1] hypothetical protein HMPREF9597_01794 [Propionibacterium acnes HL005PA4] hypothetical protein HMPREF9598_00876 [Propionibacterium acnes HL050PA1] hypothetical protein HMPREF9600_01559 [Propionibacterium acnes HL050PA3] hypothetical protein HMPREF9608_00419 [Propionibacterium acnes HL067PA1] hypothetical protein HMPREF9609_02283 [Propionibacterium acnes HL027PA1] hypothetical protein HMPREF9613_01250 [Propionibacterium acnes HL002PA1] hypothetical protein HMPREF9620_01800 [Propionibacterium acnes HL037PA1] hypothetical protein HMPREF9564_01706 [Propionibacterium acnes HL053PA1] hypothetical protein HMPREF9566_01698 [Propionibacterium acnes HL045PA1] hypothetical protein HMPREF9594_02534 [Propionibacterium acnes HL005PA1] hypothetical protein HMPREF9569_02293 [Propionibacterium acnes HL078PA1] hypothetical protein HMPREF9583_01504 [Propionibacterium acnes HL038PA1] hypothetical protein HMPREF9590_00401 [Propionibacterium acnes HL059PA2] hypothetical protein HMPREF9592_01758 [Propionibacterium acnes HL046PA1] hypothetical protein HMPREF9602_01592 [Propionibacterium acnes HL030PA2] putative oligopeptide ABC transporter, permease [Propionibacterium acnes HL096PA2] hypothetical protein HMPREF9570_02419 [Propionibacterium acnes HL043PA1] hypothetical protein HMPREF9571_02024 [Propionibacterium acnes HL043PA2] hypothetical protein HMPREF9581_02464 [Propionibacterium acnes HL087PA3] hypothetical protein HMPREF9586_01472 [Propionibacterium acnes HL083PA2] hypothetical protein HMPREF9579_02227 [Propionibacterium acnes HL087PA1] hypothetical protein HMPREF9588_00244 [Propionibacterium acnes HL025PA2] putative oligopeptide ABC transporter, permease [Propionibacterium acnes HL099PA1] # 1 102 1 102 102 181 100.0 2e-44 MGLLVCMVVMLLLMESGLIKVFAAGALLGLWLGCMRMVESESVKERKAGARVRLWVKRGN DWVGVGYQDVHVFQGGGRGKGQVCQYNAMEIRKPFFVAKLMF >gi|302034501|gb|GL383250.1| GENE 158 147185 - 148075 700 296 aa, chain - ## HITS:1 COG:Cgl2160 KEGG:ns NR:ns ## COG: Cgl2160 COG0320 # Protein_GI_number: 19553410 # Func_class: H Coenzyme transport and metabolism # Function: Lipoate synthase # Organism: Corynebacterium glutamicum # 2 274 36 308 348 395 68.0 1e-110 MGPEYRDMRRRMIDGDLHTVCQEAGCPNIFECWEDREATFLIGGDHCTRRCDFCQIESAK PEGYDKDEPRRVTESVKQMGLRYATVTSVCRDDLEDEGAWLCAETIRQIHQVTPGVGVEM LAQDFSGKQDLLDIVFEARPEVFGHNLETVPRIFKRIRPGFRYDRSLAVLDSAHEAGLIT KSNLILGMGETREEISQAMRALHDANTDLLTITQYLRPNSYLHPIDRWVTPQEFDELAEE AREIGFVGVMSGPLVRSSYRAGRLYRQAMEARGERPVMIVTGYRDGAKPAPFAAKE >gi|302034501|gb|GL383250.1| GENE 159 148022 - 148231 91 69 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQISVDHSATHVAVLRTHCGPSLDPVGFVLDGRLRILDLDSEELSTVCFDTHAGQFNCVC RSYEVSGNG >gi|302034501|gb|GL383250.1| GENE 160 148188 - 150431 1681 747 aa, chain - ## HITS:1 COG:Cgl0382 KEGG:ns NR:ns ## COG: Cgl0382 COG2217 # Protein_GI_number: 19551632 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Corynebacterium glutamicum # 20 747 17 754 755 554 44.0 1e-157 MSTAAMSPPDEEQTVLHPPVQLQISGMTCAACATTIEKRLSRIDGVHASVNFASERATVT GMGVKDAIAAVKDAGYTAALLSDIDLAAEAERRITMLRRRLIVAVLLTLPLMDIGLVLAL EPQLRFPTWDWLLVSLSLPVVFWSAWPFHKATWTNLRHGMTSMDTLVSLGVLTSFGWSFI SILIGAQDQEGYWLGYGITPAGADTLYLDVAAGVTCFLLAGRYFEARAKRSARSVLTALR QLAAKNARVLRNGIETVVPVEQLHQSDLFVTLAGETLAADGEVVEGSSSIDTSMMTGEPM PADVTVGSAVLGGTMNLTGRIVARATGVGDHSQLAHMAVLAEEAQARKANVQRLVDKVVE IFVPAVLAIVVLTFFGWWIAGAGTRHALSAGLSVLVIACPCALGLATPTALMVGVGRGGQ LGILIKGPEALEASGRIDTVVLDKTGTVTSGEMTLVATLPAKGQDVDRAHRYAAALDQHS THPVAKAVVAAVKGTIPACPSPRTLAGRGVSGEVEGHRVMVGNPAFLTEAEIKIPAELSH TVEKAAETGRSAVLVAIDGQAAAALVVADTVKPEAPEVIAQLKNMGLRTVLLTGDSKAAA KVVGTQLGTDEVLAEVLPTDKAEVVERFRSKGRVVAMVGDGVNDAAALASSDLGMALVTG TDIAMRSADIICVRHHLGVVPDAIGLSRRTLRTIRGNLAWAFIYNIAAIPIAAAGFLNPL ISGLAMSLSSLFVVTHSLRLRNFGTRS >gi|302034501|gb|GL383250.1| GENE 161 150428 - 152305 1233 625 aa, chain - ## HITS:1 COG:MT0111 KEGG:ns NR:ns ## COG: MT0111 COG3336 # Protein_GI_number: 15839482 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Mycobacterium tuberculosis CDC1551 # 79 612 116 657 661 249 31.0 1e-65 MAIVAAVIGRLRPLEPRLLGRENPDVLTSVLHAVVETLFWTALVWTLTELVRATLCSPHR DVVDSTRTRGRRAWLAAQMWVVLALLMIPLESADSAGLTFEQAFLDLPTYITSTPSVAAW LVVAVLGLLVGLLALLSTHLGGLVVASLLTVLAALPVPVTGAISVGLNHDFATDSGALAT VGMTVAAACVLVEVLDGPRPALTDRLIWKQRIGAAVTLAGSIVVTWQGQAERSWGSDRWG VARLIVLVATVIWVVITWLPRTRMLSWLGVTMVAVVLIVTGAANQLVPPRYLIGQTPAVN YLGYELPPAPTAAILLAPGRPNIGFWTLSVLGIVGYYVAVRTLKRRGEAWSGARIGSWIG AWAVVIYLASTGLWEYSSMQFSWHMLVHMTFNMLVPALLVLGAPITLLRRVLRSGDQIND GFNGPHDCLMATLEWRPTKILFGPFAAWIVFIVSFYVVYFTPIFGYLMRYHWGHQWMLLH FLVAGFMLFEYVIGLDDLPVSLPHIGRLGFVITAMPFHSFFAVITMNAHQIIGKDFYEAL SIPWVPNLHDDQNVGGQITWATGEIPMALVLIALCVQWFISDRRDQRRGDAFEDADLDES LAAYNDMLARMAGQEIKPHDPGTKS >gi|302034501|gb|GL383250.1| GENE 162 152421 - 153185 595 254 aa, chain - ## HITS:1 COG:Rv2217 KEGG:ns NR:ns ## COG: Rv2217 COG0321 # Protein_GI_number: 15609354 # Func_class: H Coenzyme transport and metabolism # Function: Lipoate-protein ligase B # Organism: Mycobacterium tuberculosis H37Rv # 29 204 21 192 230 194 57.0 1e-49 MKPRGWVDHPAGLHFEYLGIADSRPTRTEYNECWAHQREVHAEVSAHQRPNTVIYVEHDP VYTAGRRTRKEAYPFDGTPVVPVDRGGEITWHGPGQLVGYPIVFLQRGIGVVDYVRRVEE AVIRLVAQYGLRAGRVPGRTGVWFPSDGMGPERKVCAIGIRVSRQTAMHGFALNIDPDTA GFDNIIPCGISDADVTSMARELRRLHGPDAEVPSLLEVAGNLEPILTEMMSFQPYEMSPD IPRREHPAFLHPMP >gi|302034501|gb|GL383250.1| GENE 163 153413 - 155146 1911 577 aa, chain - ## HITS:1 COG:ML0861 KEGG:ns NR:ns ## COG: ML0861 COG0508 # Protein_GI_number: 15827386 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes # Organism: Mycobacterium leprae # 1 577 1 528 530 437 51.0 1e-122 MSTEVTLPALGESVTEGTVSRWLKAVGDTVEADEPLLEVSTDKVDTEVPSPASGTLLEIK VPEDEDAEVGAVLAIIGDPSESGSAPAEAPSGNNEAAEPQPEPEPAAERKPAPSGGSAQG VEVTLPALGESVTEGTVSRWLKAVGDTVEADEPLLEVSTDKVDTEVPSPASGTLLEIKVP EDEDAEVGAVLAIIGDPSAVESAPAPAKPTAEPAEKAKPEPVKSEAEEAPAPTAPKPAEA PKPAGTNEVAPRATNPSSDVYVTPLVRKLARENNVDLSTITGTGVGGRIRKQDVLAAAGK SGEAPSAPQAPAAAPAPAAPKPAGSARKASQEVSPEAAALRGTTEKMSRLRKVIASRMVE SLQISAQLTATVEVDMTAISRIRNAEKAAFKAREGVGLSYLPFITKAVVEALKANPTFNA NIDTEVGTITYGSSENIGIAVDTPRGLLVPVIKNAGDLNIAGLTHQIGDLAARTRDNKVT PDELSGGTFTITNYGSAGALFDTPIVNQPEVAILGTGALVKRPVVVTNEFGEDTIAVRDM MYLSLSYDHRLIDGAVAARFLSGIKARLEEGDFAGEF >gi|302034501|gb|GL383250.1| GENE 164 155307 - 156833 1324 508 aa, chain - ## HITS:1 COG:Cgl2156 KEGG:ns NR:ns ## COG: Cgl2156 COG0260 # Protein_GI_number: 19553406 # Func_class: E Amino acid transport and metabolism # Function: Leucyl aminopeptidase # Organism: Corynebacterium glutamicum # 71 502 86 506 513 286 41.0 5e-77 MRGILVANSTQLPIRPRPDLKVSRNANGADVVIAGLVEGSQGPTVQGLAPRAVKEAEETF GAPLVEVAIRAGGSTKIGSTVVLPWFGNSLVLVGCGAEGFDGESLRKAAGSGARAAADLS HGSSLKVAVDMGTVSAEQVRIAAEGALLGCYKVPTITATSNEPEISTVTIVSNARGAKPE LNKARILADAVYTARDWVDAPANLLYPKTFAASVQSWCNNLSDVTVDVLDEKALGRGGFG GILAVGGGSAHSPRLVRVEYAPEGSTTTLALVGKGITFDSGGLNIKTAANMYTMKCDMGG AAAVLAAIGAIARLGLNVRVVAYGCLAENMPSGSGWRPSDVVTMYDGTTVENGNSDAEGR IVMADGLARACEDNPDFIVDISTLTGACMVALGNHTAGVMTSGAQAADTLLDASEAAGED FWELPITDEVREGLHSDIADVKSSGAREGGAMLAAAFLQRFVTPGIDWAHLDIAGPAYNE ASAHDYTPIQGTGFGVRTLVQLAAHMAG >gi|302034501|gb|GL383250.1| GENE 165 156868 - 157347 322 159 aa, chain + ## HITS:1 COG:no KEGG:PPA0695 NR:ns ## KEGG: PPA0695 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 159 1 159 159 257 100.0 1e-67 MGPVIPRGDTSSISLVEGCQVRGGAVVMSRQYGEFVGSTTSAQHSAPLGRASHPKLRLVL DVVVAAAGVALLVWGIMVMASPTVSCRGVEMHPGDTCHKATYTATHTDTVQTYEQRRRSI AQSRPTVIGLGIALTAFGAVMTWQTVRVRDHPSDSSIGP >gi|302034501|gb|GL383250.1| GENE 166 157317 - 157535 242 72 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3765 NR:ns ## KEGG: HMPREF0675_3765 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 72 1 72 72 116 100.0 3e-25 MSYSWLFKQSRITVKGSEHLGELGAGQQFESQEEAEAWLSETWPELQDAGIDEVTLMEDD DVVYGPMELSEG >gi|302034501|gb|GL383250.1| GENE 167 157579 - 158334 547 251 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3766 NR:ns ## KEGG: HMPREF0675_3766 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 251 1 251 251 387 100.0 1e-106 MGLFRPYEQGTSKKTGPTEETVEAGPGSSTESSSSSATTAPRRAPKTSSTGRKQRASKGD HATKKPETADHKAPVAQPKTVSRHTAKKGPTPTRAEAEAARRHRLNPTLSKKEARKRERL AKRERQAAAMEAAERRPERGYLRDYIDSRWTFSEFIMPIFLAVMVIWLAMLFIAPTAVGA INAMSLGMLIVMILWLIDSWRLWHGAKKGIRARYPSAPLRGLWSYLNNRAMTVRRWRNPA PRVERGERIDS >gi|302034501|gb|GL383250.1| GENE 168 158533 - 159336 788 267 aa, chain + ## HITS:1 COG:MA1460 KEGG:ns NR:ns ## COG: MA1460 COG1842 # Protein_GI_number: 20090319 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Phage shock protein A (IM30), suppresses sigma54-dependent transcription # Organism: Methanosarcina acetivorans str.C2A # 3 233 2 231 246 179 52.0 5e-45 MAGIFARLSTVFRSKANKALDKVEDPRETLDYSYQRQLDMLQKVRRGVADVATSRKRVEL QMNQLQTDVDKMQNAASRALEQGREDLAREALTRKATLQAQLNDLQTQHATLQAEEEKLI RGSQRLQARVDAFRTKKETIKATYSAAEAQTRINEAFTGLNEEMGDIGMAITRAEDKTME LQARAGAMDELIASGAIEDPTRSYGDDITRELDSLANDHAIDAELSALKAQLGTGRDGSA PELESGAENGTDPHTGSRSVRRQEDQS >gi|302034501|gb|GL383250.1| GENE 169 159333 - 159623 392 96 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3768 NR:ns ## KEGG: HMPREF0675_3768 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 96 1 96 96 164 100.0 1e-39 MIIRIVGEGQWQVPDTEMGHLNRIDARVEHAIGTTSQNELTEALTELVTTVRTVGTPIAD DNIIDSDLIVPDVSATIEEVSVWLSENPAGDGLIPG >gi|302034501|gb|GL383250.1| GENE 170 159794 - 160147 355 117 aa, chain + ## HITS:1 COG:ML0871 KEGG:ns NR:ns ## COG: ML0871 COG0316 # Protein_GI_number: 15827394 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mycobacterium leprae # 10 117 11 118 118 164 74.0 4e-41 MTDALTPPATDGIILTDAAAAKVKSLLDQEGRDDLALRLAVQPGGCSGLRYQLFFDERHL EGDVVKTYGGVDVVTDRMSAPYLAGATIDFMDTIEKQGFTIDNPNATSTCACGDSFH >gi|302034501|gb|GL383250.1| GENE 171 160523 - 161236 732 237 aa, chain + ## HITS:1 COG:MT2256 KEGG:ns NR:ns ## COG: MT2256 COG1622 # Protein_GI_number: 15841691 # Func_class: C Energy production and conversion # Function: Heme/copper-type cytochrome/quinol oxidases, subunit 2 # Organism: Mycobacterium tuberculosis CDC1551 # 4 207 71 324 363 173 36.0 2e-43 MGNMWIGAWVAALVIGVFVWGLIGFAAFKFRRKDGDPAIPRQSRYHLPLEVLYTIVPFLV IGVLFFYTVRTENKVLDKNPDPQHVVNVVGQKWSWTFNYMEANNPDAGGVVTHEVGTIEK IPNLYLPVSQSVRFRLKSADVIHSFWVPAFYFKMDVIPGHPNQFDLTPTRIGVYDGKCAE LCGTYHANMIFKVHVVSVEDYNKHLQQLKAQGDTGEIKPASSVAALTTTESNEGEKK >gi|302034501|gb|GL383250.1| GENE 172 161233 - 162951 1634 572 aa, chain + ## HITS:1 COG:MT3128 KEGG:ns NR:ns ## COG: MT3128 COG0843 # Protein_GI_number: 15842607 # Func_class: C Energy production and conversion # Function: Heme/copper-type cytochrome/quinol oxidases, subunit 1 # Organism: Mycobacterium tuberculosis CDC1551 # 11 548 5 548 573 689 66.0 0 MTSASIAQRTAPPAITRQERRKASFGALVWDYMTTTDHKKIGRLYFGTSLFFFVFGGILA LLIRAELAYPGMQFMHQETFNQLFTMHGTIMLLMFATPLFSGFANFFMPLQIGAPDVAFP RINQFAYWLYLFGSLMACSGFLTPGGAASFGWFAYAPLSDAINSPGVGGDLWVMGLYLLG LSSILGAVNFVTTIILMRTPGMTMFRMPIFSWNILITSIMVLVVFPVLSAGLLVLEADRA LGAHIFDAANGGPILWQHLFWFFGHPEVYVIALPFFGIITEVLPVFSRKPVFGYVGLVFA TLAIGGLSVSVWAHHMFVTGAVSLPFFSFMTFTIAVPTGVKFFNWIGTMWGGSLSFDTPM LFAIGFLTTFLFGGLTGVMLASPPMDFNVSDTYFVVAHFHYVLFGTVVFAMFAGFYYWWP KITGHMLNETWGKIHFWTLFVGFHTTFLVQHWLGVEGMQRRIADYGAWEGFTLLNQVSTF GAFLLAISMLPFAWNVWITRHDPNIEVADPWGWGRTLEWATSCPPPAHNFTKMIRVRSTS PAFDINHPEAALAPETGEANPRELVHSGKEDA >gi|302034501|gb|GL383250.1| GENE 173 162951 - 163346 505 131 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3772 NR:ns ## KEGG: HMPREF0675_3772 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 131 1 131 131 231 100.0 9e-60 MKPERWVFGGLGLFYLVVTPVYWFTAHEVAGTWVLGLSAAMALMVFFYVQVIAKKINPRP SDEKDAEVIDGAGPVGFFPPQSIWPFWCALVVAIMCLGPIFGWWISLLGLGIGIWAASGW AFEYYRGDYAH >gi|302034501|gb|GL383250.1| GENE 174 163398 - 165836 839 812 aa, chain - ## HITS:1 COG:no KEGG:PPA0704 NR:ns ## KEGG: PPA0704 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 812 1 812 812 1473 99.0 0 MNRRLTAQTFHIWTRNKHRINLSCPFAVVIACFIALYLTLSSFALTGSQKRISYLDGHDA SITISQTQTTLRPAQGTVIDRLRKSGARNISVITTGSSFQIDGFRTTGLSTGFHDRIQYM EWASGSPASRYHLTTGHWPSSPGEVALSEPLAARLHDPSRIHVFSDTSRLRVVGTFHDAY ATDALVAIGAASGWKSMSAAASKGYPSLSPIVEYVWDGLPLSTAIPLFSTLYGTPTDSLV TSSRDGAKISASPQVSLASRSPYLVMIPCLLLTGAVQLTVMARIATSIRAQRQSMLKLGI PLSATLASALGSVLAICLAAWSVGVCGGWILGMALRRFLVPHLLTQPISPPVSIAPLAMT LLALTVAMSIAAIPLTGPRAGGRNRTTPHHARSATTLRWVRRVAGVLLIIGGLLALQNRT QLDDVIHGAIFVSSGAVLLMPDLISGIISVIKLPTPAGLLAVKTLHFNDARIRIMGSALC LCLVIPASVNVIMTSYQQSTAALSMAPPDTLILQSPDSNPVPKDLPRSVQAATGMKRAVK VDMLSGEITSNHHSGTAQAVMVVSSPEDAERVLNMKLTTEERTHLNNSFMLSFSDGPAKT ILALDDGRRAAIPSSRVEVNPTWAYIYGGVIVKATLERIRAQSIPHQWVYTGVQKSGITQ AVNYVHRQGLDPQLLTYHVEPEPPQMPFAWWTVCLTLVIIAAGITASVSASLGHIARNQS RQLLAIGLPKRLGAMIPILESMLLVGLCSVIASVLAIVPVVVGRSLSESFTLWVPKDWVI LWCAGLGLLIVLSPLAGLRAIRARERTADALI >gi|302034501|gb|GL383250.1| GENE 175 165833 - 166507 240 224 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 1 203 1 199 223 97 30 7e-19 MNPTVSGESLSKTFISGSTRVHAINNVSVSFTHSGVHLLMGESGSGKSTLINLLAGLDTP DSGSVYAEGVTVSDQSEANRARFRLRHIAVIFQDDNLIAELTNTENIALPLWAQGTSKSD ATEIAHEAMRKLGIESLGRRHPGEVSGGQRQRVGVARALASGQHILLADEPTGALDSTTS EGLFELLGNLAHDNQMCVIVATHDPLATKHCDSVTTLLDGQLVA >gi|302034501|gb|GL383250.1| GENE 176 166665 - 166886 165 73 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|289426867|ref|ZP_06428593.1| ## NR: gi|289426867|ref|ZP_06428593.1| conserved hypothetical protein [Propionibacterium acnes J165] conserved hypothetical protein [Propionibacterium acnes J165] hypothetical protein HMPREF9593_00912 [Propionibacterium acnes HL046PA2] hypothetical protein HMPREF9604_01615 [Propionibacterium acnes HL036PA1] hypothetical protein HMPREF9605_02303 [Propionibacterium acnes HL036PA2] hypothetical protein HMPREF9611_01607 [Propionibacterium acnes HL063PA1] hypothetical protein HMPREF9606_01585 [Propionibacterium acnes HL036PA3] hypothetical protein HMPREF9614_02413 [Propionibacterium acnes HL002PA2] hypothetical protein HMPREF9573_01383 [Propionibacterium acnes HL072PA2] hypothetical protein HMPREF9595_01660 [Propionibacterium acnes HL005PA2] hypothetical protein HMPREF9596_01529 [Propionibacterium acnes HL005PA3] hypothetical protein HMPREF9610_00928 [Propionibacterium acnes HL027PA2] hypothetical protein HMPREF9615_02277 [Propionibacterium acnes HL002PA3] hypothetical protein HMPREF9572_00621 [Propionibacterium acnes HL072PA1] hypothetical protein HMPREF9337_01469 [Propionibacterium acnes HL096PA3] hypothetical protein HMPREF9568_00688 [Propionibacterium acnes HL013PA2] hypothetical protein HMPREF9563_02138 [Propionibacterium acnes HL020PA1] # 1 73 49 121 121 137 98.0 4e-31 MGYRRAGLGIMNVSSKNNDIMSSYENKSGTNARWYHDADGKGRCVTMLAYRSDNDINTWD DDELTSWATNGSC >gi|302034501|gb|GL383250.1| GENE 177 167133 - 167420 149 95 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|314979285|gb|EFT23379.1| ## NR: gi|314979285|gb|EFT23379.1| hypothetical protein HMPREF9573_01382 [Propionibacterium acnes HL072PA2] # 5 76 1 72 85 131 95.0 2e-29 MARSMQIFEQTHRTCHQKKRQSKAGPQPYRGSRSTTLIDSPIAKKPDPFTQNAWHALTAS CHYAHPTVAVRRVREKIYVIWFLVSVNLSECRHSS >gi|302034501|gb|GL383250.1| GENE 178 167946 - 168602 556 218 aa, chain - ## HITS:1 COG:Cgl1506 KEGG:ns NR:ns ## COG: Cgl1506 COG0702 # Protein_GI_number: 19552756 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate-sugar epimerases # Organism: Corynebacterium glutamicum # 5 215 9 221 224 138 37.0 6e-33 MTAHRILVIGGHGHVAKHFTQLAASQGRQVDSVIRRNDQAHDVTSWGGNPVVTDVTTLRP SQWDDLISNHDAVVWSAGAGGKGAPEDTYAVDRDACTALVDAIGRSPHGPRFVLVSWCGS PNHGVPSDNSFFPYADAKAAADRHTMDSSIRWTILGPVTLSHDPASGVRILTEGEEYAGT TVSRETVAQAALACLDDGTTAGKFIRFCDGPTPIAEAF >gi|302034501|gb|GL383250.1| GENE 179 168667 - 170148 867 493 aa, chain - ## HITS:1 COG:Rv1843c_3 KEGG:ns NR:ns ## COG: Rv1843c_3 COG0516 # Protein_GI_number: 15608980 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Mycobacterium tuberculosis H37Rv # 207 492 1 278 278 331 62.0 2e-90 MTWDNGYVRFLNEQPNYDLTYNDVFMAPNRSSVGSRMNVDLTSTDGLGTPLPLVVANMTA ISGRRMAETIARRGGIAVLPQDIPADFVARSIRRVKDAHTRFDTPVTVNPTTTVGEAMNL FNKRAHGVVLVVEDHRPVGLVSPIEAEGVDRFAQCHEVMTTDLTLVGPQASPDDVFQTLA ERHQKVAVAVDEDGVLVGIMTSRGALRTEIYRPAVDPDGHLMIGTAIGINGNVAERARNA LESGSDVLVMDTAHGHQDQMIRAIEIADEARTAFETKTGRRVSIVAGNIVTRSGTLDLLE AGADIIKVGVGPGAMCTTRMQTGVGRPQFSAVLECAEAAAEVDGAVWADGGVRHPRDVAL ALAAGAGSVMIGSWFAGTHESTGAMLIDHDGRMYKESFGMASARAVRHRTRERSAFERAR AALFEEGISQSKMYLDPQRPGVEDLVDFITSGVRSSCTYAGAANLTEFHEKAVIGVQSPS GYEEGRPLQRSWT >gi|302034501|gb|GL383250.1| GENE 180 170187 - 170504 181 105 aa, chain + ## HITS:1 COG:Cgl0149 KEGG:ns NR:ns ## COG: Cgl0149 COG3695 # Protein_GI_number: 19551399 # Func_class: L Replication, recombination and repair # Function: Predicted methylated DNA-protein cysteine methyltransferase # Organism: Corynebacterium glutamicum # 8 78 13 81 114 57 42.0 8e-09 MTSTVDDVLAAVEALPAGTVVSYSDVAQLVGTSPRRVGTIIACEGQEVDWWRVTTVRGTL PEHLMAHARQHWDEEGLGGGTTMLRDHAPDPAEWERNWQQLRGRI >gi|302034501|gb|GL383250.1| GENE 181 170553 - 172232 1449 559 aa, chain - ## HITS:1 COG:Cgl2141 KEGG:ns NR:ns ## COG: Cgl2141 COG1290 # Protein_GI_number: 19553391 # Func_class: C Energy production and conversion # Function: Cytochrome b subunit of the bc complex # Organism: Corynebacterium glutamicum # 35 484 11 458 539 507 53.0 1e-143 MARPTGIAEESPTLRTATADDKPTGRGMRIVNWHDDRLGLAKMGKENLRKVFPDHWSFLL GEIALYSFVALLLTGVFLTIWFKPSMAEVDYTGPYQLLKGTPMSEAFASTLDLSFEVRGG LLIRQIHHWAAILFVAAATVHMLRIFFTGAFRKPREINWLIGLGLFMLAMVEGFAGYSLP DDLLSGTGLRFADGLMRAIPLVGTWVEFFVFNGEFPGTAIVPRLYMVHILLIPALLLGLV AAHLALVVYHKHTQYPGPGRTEKNVVGYPLFPVYAAKAGGFFFVVFGVLTLMGTFLQINP VWKFGPYNPGEVTAGSQPDWYMGWLEGAVRITPNWEWHIGHTTWSWNIFLPGVCLMGVLF TLLVAWPFVEKWITGDESEHHLLDRPRNVPTRTALGVAAMSCYAMFWLSGANDIIATHFH LSLNSITYFMRGAIFVVPIITYQITKRICVALQRADRQRLLLGSPSGEIIREPNGAFHEA HVPVSDNEAWTLTQQKTYPILTAGSIDDRGRKVSKKRARWMKWFLGDNVPTVTREELEAA RCHAEIGSGDSAPQAEIAD >gi|302034501|gb|GL383250.1| GENE 182 172232 - 173314 777 360 aa, chain - ## HITS:1 COG:Cgl2142_2 KEGG:ns NR:ns ## COG: Cgl2142_2 COG0723 # Protein_GI_number: 19553392 # Func_class: C Energy production and conversion # Function: Rieske Fe-S protein # Organism: Corynebacterium glutamicum # 242 351 92 204 204 126 48.0 6e-29 MAGTEGGSREVSDKYTERDDLPVDNPGVEPHVERYTDANPKAGNRAYRQVLTLLSLVPVL AIAFVVVYFAVPRDATVEIGPLYMNASTFGLGLCAGLAVLFIGIACIHWAKQIMGDEEII QERHPVNSDATDRKEFAKQWRIGAEQSGLSRRKLIGGALGGAIGIMAVPAIVTLADLGPK PGPGTRRATIERTIWAEGVRLVNDVTFQPIKASDLEIGQLVNAEPENLKELEGVEFQRAK AKAAILIVRMDLDSIKIPESRKDWQVGGILSYSKICTHVGCPVNLWEQQTHHLLCPCHQS TFDLGDSGVVVFGPAGRSLPQLPITVDDKGYLVARSDFTVPVGPSYFERDSRHDYKKGDN >gi|302034501|gb|GL383250.1| GENE 183 173281 - 174084 548 267 aa, chain - ## HITS:1 COG:Cgl2143 KEGG:ns NR:ns ## COG: Cgl2143 COG2010 # Protein_GI_number: 19553393 # Func_class: C Energy production and conversion # Function: Cytochrome c, mono- and diheme variants # Organism: Corynebacterium glutamicum # 13 262 45 307 308 184 38.0 1e-46 MRFLSTKRHSRAAKPVLLLLALVLVGCVYAFVSPSASGRADTNASTQVARGKEIFQQNCS SCHGLNGEGTTQGPSLAGVGAAAVDFQMGTGRMPMARPEAQAPSKKTKFTDEETASVGAY VASLAPGPKVPSPQSLNTSNLKAEELARGAELFKTNCSACHNIEGRGGALPEGAYAPSLM KTSNKHIYEAMRTGPQQMPVFSKSVITDQDAREIIGYLQTTHSEPNNGGFALGGIGPVTE GLFGWIIGIGGLVLVAGWLARKGARAK >gi|302034501|gb|GL383250.1| GENE 184 174116 - 174709 551 197 aa, chain - ## HITS:1 COG:MT2249 KEGG:ns NR:ns ## COG: MT2249 COG1845 # Protein_GI_number: 15841684 # Func_class: C Energy production and conversion # Function: Heme/copper-type cytochrome/quinol oxidase, subunit 3 # Organism: Mycobacterium tuberculosis CDC1551 # 1 197 27 203 203 159 51.0 3e-39 MGVWVWLASELMFFAALFAAYFMIRQTTSDMATAGQQTLWQSESSHLTVGAAAINTLILV LSSVTCQMGVHAAEHGQVKRTKGLGAITSWGMREWYTLTFIMGAVFIAGQLAEYITLIGE GHTISSSVYFSAFFIATGFHGLHVTGGLVLFLFTLARTYMARRFTHEQAVTAMVVSYYWH FVDVVWIILFSVIYIVR >gi|302034501|gb|GL383250.1| GENE 185 175056 - 175487 388 143 aa, chain + ## HITS:1 COG:MT3230 KEGG:ns NR:ns ## COG: MT3230 COG0784 # Protein_GI_number: 15842719 # Func_class: T Signal transduction mechanisms # Function: FOG: CheY-like receiver # Organism: Mycobacterium tuberculosis CDC1551 # 9 134 5 130 133 117 49.0 5e-27 MGDKHGELSGALKVLVYSDDHAVREQVKVALTGMIAPDLPHAEVVETATQASVVDAVSSG HYDVLIADGESAPYGGMGVCHQLKDEVDNCPPVVLLVARVADAWLASWSHADAIATHPVD PVALPQTVASVIRGIRGDAAETP >gi|302034501|gb|GL383250.1| GENE 186 175635 - 175784 91 49 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3784 NR:ns ## KEGG: HMPREF0675_3784 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 49 1 49 49 84 100.0 1e-15 MLLNTVADGLQVDDGVVPQLAQRLERAAQSIDSGAAHDHLNRWISVTQG >gi|302034501|gb|GL383250.1| GENE 187 175771 - 176481 417 236 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3785 NR:ns ## KEGG: HMPREF0675_3785 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 236 1 236 236 371 99.0 1e-101 MWIILGSAVACGLALWHLRVTVPNLVEPTVEEVGDAVLAIKPTYASLTTPTRTFVVAVTA AVCGAASVCAPPWAWGVWWIWSGSVTTLVIVDYATTFLPLKLWRRCVAEAGVALLSGIVL TRPPRARWLIACVLIAGVSTGFFWLMWRLNSSLGYGDVRLAAGTGFLGATTAVLSPYPDF VRAGMMTLLSSTILGAVVAVIVTLVRKHRPSPWGSAFAYGPALWAGPWMALAISLG >gi|302034501|gb|GL383250.1| GENE 188 176491 - 176970 298 159 aa, chain - ## HITS:1 COG:no KEGG:PPA0716 NR:ns ## KEGG: PPA0716 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 159 23 181 181 277 100.0 1e-73 MITMDLESSKTSTAWVDARFFSLHVRSLVHECRVPWRVVALLAHVPSRIVQRLAGQGDRP IHRIRVIDAVRILHISIDDINAARERIVPAGSTRARLLALHKAGCDIAEIATMLDVTMSY AANLMSGEEQMCTEMTRLRSRAACEARGLLSTAESMASM >gi|302034501|gb|GL383250.1| GENE 189 177330 - 178577 1034 415 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3787 NR:ns ## KEGG: HMPREF0675_3787 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 45 415 1 371 371 540 99.0 1e-152 MRQTDRNCSASRRLGPRISGLWTIWSIPWKVLDHEPYPIRIGGTVSCKKKASRKTAAASS PSTLKEQRAQALETAAAYLAAAQDKAAPLAAQVNDKLGPLTDQISDKLGPLSDQAVEASK KALDASKEYTQEKVVPALHQAYDTFQKDVLPDLEERAEKVISHPAVEEATRRGQAAFSAL KGESTELAAKAGIETKSVKKAKHRSKFGKVFGTLAVLGGISAAVVVASRRFLSSSDDGWT AHEPKVTYSWTPGDKDNTDSPAPNTDEKLKDTPSPKPETSRGSKPVAKPADKPEPKEDKS VPADPVAAMADEGGPAAAAPETTAETTAFVDEGARSETTTKDGAVKAPEQGTKDEGNKAT SYVGDNPPEGYVIKGNDRSMKYHVPGSGGYDRTIADVWFATEEAAQAAGFTKAQR >gi|302034501|gb|GL383250.1| GENE 190 178629 - 179141 551 170 aa, chain + ## HITS:1 COG:MT0011 KEGG:ns NR:ns ## COG: MT0011 COG0652 # Protein_GI_number: 15839382 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family # Organism: Mycobacterium tuberculosis CDC1551 # 3 170 15 182 182 206 68.0 2e-53 MASTATLRTNHGDIVLNLFADQAPKTVDNFVGLAGGTKEYVDPHTGQPTTGRFYDGLTFH RVIDGFMIQGGCPLGTGTGGPGYRFADEFHPELTFSKPYLLAMANAGPGTNGSQFFITVA PTPHLNRRHTIFGEVADEESRKVVDEIAQVRTGRMDRPVEPVVIESVELA >gi|302034501|gb|GL383250.1| GENE 191 179259 - 179903 447 214 aa, chain + ## HITS:1 COG:no KEGG:PPA0719 NR:ns ## KEGG: PPA0719 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 214 1 214 214 332 98.0 5e-90 MLDRWSEHPVRPVPLRCPASVAMAVVTLLIAIAARLTPLSSLLASGSARAFDFQVWRPLV FSLTTSSVISAVLTGLLLVLIGYQIEPMIGSVQFAFLYLLCGVGGSAAISLAGVLYSFEG SMCGLFGLMAASAVVKYVQKQDIRADIVLLTMFIIWAIVVGSNTWVADIGAVVVGAVSGW AWLQTRWSSYRRQLGAGLAVLAVCLVALVVTWVM >gi|302034501|gb|GL383250.1| GENE 192 179823 - 181586 776 587 aa, chain - ## HITS:1 COG:Rv2191_2 KEGG:ns NR:ns ## COG: Rv2191_2 COG0322 # Protein_GI_number: 15609328 # Func_class: L Replication, recombination and repair # Function: Nuclease subunit of the excinuclease complex # Organism: Mycobacterium tuberculosis H37Rv # 206 538 2 333 413 211 40.0 3e-54 MSAVPLQPSFDDLGTSLSEVTFCVVDLETTGTSEGSQITEIGAVKVCGGRVEGEFQTLVC PTGPIPASVQVLTGITHAMVRSAPSLSAVLPSWLEFSRSTALVAHNARFDIGFLQRAYAQ HDYPWGDPAVVDTLALARSVLARGEVRNYKLSTLSRLFHTTTTPSHRALADARATVDVLH GLIDRVGNLGVTTLEDLLEMTHRVPQARRRRRVWAKDLTEGPGVYWFCLDKPAPAHPEVL YVGKSVNIRRRVSQYFTASETRRRMDEMVRIATGVKARECSTQLEAGVRELRLIDAHQPR YNHRSRRQGSVWWVTLTHEAHPRLAVVQRAHRDSQPPWGPFISRQAATRAAIILAEAFGL RQCSGAMSRHPDGCPLAEMGRCSAPCLNPYVDYSTIVGFARLAMTGDVRDLTDRLAQRIA RLSAAERFEEAAEFTEDAQEVLRATRRRSRLVSLASCPEIVAARRDGASWEIHVIRHGRL AGAGRCRLGIDPMPIIDAVCATAETVSAPPAGLPACTIEEAELVASWFEEPGVRLVDVIG EWSWPAHCWMDTDDLAARVAALHHPGHNESDETDSQDRQARPQLTPV >gi|302034501|gb|GL383250.1| GENE 193 181874 - 183031 189 385 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167856514|ref|ZP_02479226.1| 50S ribosomal protein L1 [Haemophilus parasuis 29755] # 228 383 18 173 175 77 33 6e-13 MEHRYGASQVSGGAPRRGRGVAFAAITGAILLGTVASVDPGAQAAPDPIDQAKVRLAQLD EQTSKVQEDYTEAQAALDKAQKDLDRSQRDLKAQSDKVATMRKALGRVALSDYQSGGGVS MATQLVASGDSGQFLSKLATIQNVTERTSVQFQDFQAEQARLKSMKSQAEADRATIESQR NQQAKLLADAKKKEQEAKQVVDRLTAQQRAELERQQTAEVQAAAAHAVSRSTGRPTDQQS ALGQPSSSSTQASQAGSQVPIPDPSHGVSSRAQSALSFALAQLGKPYIWGGTGPTGYDCS GLMMASWGKAGVSLPRTAAAQYAAGTPVSTSDLQPGDLVFFYPGITHVGMYIGDGKFIHA SSPRTGIKVSVLAQQSSYQGARRFG >gi|302034501|gb|GL383250.1| GENE 194 183038 - 184108 427 356 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 [Bacillus selenitireducens MLS10] # 5 315 7 317 323 169 34 1e-40 MLSVGIDIGGTKVAAGVVDESGQIVRRIQRLTPSRSPEAVEDAIVESVRELARNLPICAV GIGAAGWIDTEQALVRFSPHLAWRNEPLRDRLSERITVPVLVDNDANAAAWAEFRFGAGQ GSRVMVCLTLGTGIGGALVINGRMFRGRYGMAGEFGHMTVVPDGHWCPCGNRGCWEQYAS GNSLVRDARALLAEGAPGAQDLLGYVADRNPGNLIGPDVTRAAVDGDRLAIELIADIGIW LGRGMANLAAALDPDLFVIGGGVSAAGDLLLEPARTVYARTLTGRGFRPMADIQKAHFGN DAGLIGAADLARHSINEPPGMARGFWPRRRTAVRKPRRTLRQSLSETLAGPVVRDK >gi|302034501|gb|GL383250.1| GENE 195 184113 - 184520 202 135 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3792 NR:ns ## KEGG: HMPREF0675_3792 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 135 1 135 135 234 100.0 8e-61 MEHDGNDVDAAFEALIAREFGEVVTAPGRPRPNGLPAQRAPAHIPQEPPRDADEMDEPLP MEPAAPPSPTTKVGLVLVAICIVAVLLDMSGVNVPQTTLILAIASGGAGISLLIWRAITR ADRDDEGPWGNHSRL >gi|302034501|gb|GL383250.1| GENE 196 184580 - 185335 617 251 aa, chain + ## HITS:1 COG:ML0892 KEGG:ns NR:ns ## COG: ML0892 COG0204 # Protein_GI_number: 15827414 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Mycobacterium leprae # 1 221 1 221 244 177 44.0 1e-44 MWYEFFKYALFGPGVRALWHPRVVGKENIPTEGGVILACNHIAALDPIIVASMIDRKLTY PAKKELFAGDRGLWSKVVAWFLRAVEQVPLDRSGGRTSVNAMGSVERRLAEGGLVGIFPE GTRSSDGRLYKGKTGVARMTLGSGAPVVPVGISGTTVRRKVLGIPLLDHPTLIFGKPMHF DVLADRTEETAVLRWVTDEVMGAISDLTGQSYVDVYGFRVKHGNLKGKDVSKFVKPRPGG KPLPPPRVTKA >gi|302034501|gb|GL383250.1| GENE 197 185340 - 186059 354 239 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3794 NR:ns ## KEGG: HMPREF0675_3794 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 239 1 239 239 353 100.0 3e-96 MKWLRRSHGEMTGHPLPAQPTIVAIHLHRPGDLAAAEHCLSGRVSKVYVMSGRRMERTQA HAEALRHLCEGSVVLMAPEGIRSWASQVHRLDVEVARLALDAEALVVPAQVVAGQLSLGT SVDMSRHAATPHSHAVLRAAADDVALALCKLTGLPYQDYPAVRADQRPHPIIWLFQMRKL RRDRRRHRRDAEERSREESARDAEELAREEENARLAAQLQARQASLADRLAERDIHPGR >gi|302034501|gb|GL383250.1| GENE 198 186157 - 187551 1049 464 aa, chain + ## HITS:1 COG:PA2843 KEGG:ns NR:ns ## COG: PA2843 COG3200 # Protein_GI_number: 15598039 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Pseudomonas aeruginosa # 1 447 1 447 448 503 55.0 1e-142 MSQSVPSLEALNALPRVQQPSYPDPQATAEVVNQLRSLPPLVFAGECDDLRAYLAAVANR KAFLLQGGDCAETFAGVNADNIKSKLRVLLSMAVVMTYAGQLPVVKVGRIAGQYAKPRSK DTETRRGLTLPSYRGDAVNGFEFTPEAREHDPKRLIGVYNASAATLNLVRAFATGGFADL RGIHAWNADFVRNSNVEARYEALAAEIERALVFMMACGVEGDQLSTVDFYASHEALLIDY EHAMTRIDSRSQLPYDCSGHLLWIGERTRQIDGAHVEFLRHVRNPLGVKLGPTTTGEDAV AIADALDPDHEPGRLTFITRMGSKAVRTNLPRVIEAVEATGRKVVWSCDPMHGNTFETNN GYKTRSFADMCDEVNGFFDVHEELGTWPGGVHIELTGDDVTECLGGVDKLAESDLTNRYE TACDPRLNRNQSLELAFIIAERLADGRIKRDAVSPLARFRSIDL >gi|302034501|gb|GL383250.1| GENE 199 187655 - 188302 452 215 aa, chain + ## HITS:1 COG:MT0810 KEGG:ns NR:ns ## COG: MT0810 COG2220 # Protein_GI_number: 15840201 # Func_class: R General function prediction only # Function: Predicted Zn-dependent hydrolases of the beta-lactamase fold # Organism: Mycobacterium tuberculosis CDC1551 # 1 204 1 204 212 137 38.0 2e-32 MRITHLGHSCILVEAAGQRILVDPGNLSKSWRGLTDLDAILVTHRHPDHVDPEHIGALVD ANSGAVVRAEEGACHEIPALDADPVAPGDVLQIGEVRIEAVGGHHAVIHRDLEPIGNVGY LIGEGLGTILYHPGDELDETPRGVDVLACPAHAPWAAMKETVDFARSVGARHGFLIHEGL LNERGWQLSFDRHQEMVSTTFHDLRDGQPWEVPQG >gi|302034501|gb|GL383250.1| GENE 200 188318 - 189226 945 302 aa, chain - ## HITS:1 COG:PAB2381 KEGG:ns NR:ns ## COG: PAB2381 COG0697 # Protein_GI_number: 14521649 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Pyrococcus abyssi # 1 267 14 272 280 99 30.0 6e-21 MAALWGSTLVVMKGIYAHMSPENLLACRFAMAAAAFGILFPKAWRANMRTIAKGVTLGVL FAAGQLLQAIGLGTTQAAMNGFITSLYVVFTPLLAAVIFRKKVSTAIWGAVALATVGMGV LALDPSTLGSGFGIGQLLTLASAVAYAGHIVATGRFANPSNVTSLGLYQTITVAIVCTIA ALPGGLSAPTHMEDWLALAYLAIICGTLTTFMQSWGQARVESTRAAVIMCTEPLWGAVFA IGLGGEPLTGRITIGGIAILAAMALVVRPPRRRRGAPQHHTEPPVVQVDPAWATRFGTDR ML >gi|302034501|gb|GL383250.1| GENE 201 189324 - 190742 771 472 aa, chain - ## HITS:1 COG:MT2232 KEGG:ns NR:ns ## COG: MT2232 COG0515 # Protein_GI_number: 15841666 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Mycobacterium tuberculosis CDC1551 # 4 345 6 342 399 223 39.0 8e-58 MTMSTDPLVGHTLEGRYEIVSKIARGGMATVYRAQDLCLPRIVAVKVMHEGLDAELAERF DSEAKAAARLVNPHVVSVFDQGMDGDRPFIVMEYVPGCTLRHIITQEAPLTPVRALDLLE PVVSALASAHEDGLVHRDVKPENVLISDRGQIKVADFGLARAVGNHTMSATSGQLIGTVS YIPPERVTRGSSDERSDIYSAGVVLFEMLTGHKPHTGDSPIQVAWAHVNKDVPAPSQYLA NGTKAEHDIAWLVPGYLDGLVRACTSRDPGKRPANGRALLDLLRRVRHALTTGRTDDPAL AALQNTVPQPNAVIANPVAHAPGGSTDRSARRRNEPVRPGTASVPPWSRTGTPVSPPTPV SIPDSPLSPIDCPPGRIPTQPANHSQPRPRPIHRRATQPASRSRLAQDAVHRRRRGVIAA VFIVLVAVLCAYLVFHFTSSRYSASELHSTNSVARTCVHGESSCMHTVSQNI >gi|302034501|gb|GL383250.1| GENE 202 190863 - 191306 217 147 aa, chain + ## HITS:1 COG:DR0453 KEGG:ns NR:ns ## COG: DR0453 COG4290 # Protein_GI_number: 15805480 # Func_class: F Nucleotide transport and metabolism # Function: Guanyl-specific ribonuclease Sa # Organism: Deinococcus radiodurans # 19 145 37 189 191 92 35.0 3e-19 MTVATWFRSHRWSVWIVTLLAAVVVGCSAPGNVAAAGSNATTAPMTVMATTQSSVGLVTI QENELPTQARQTLKLIDSGGPFPFSRDGIVYHNNSGALPHHKDGWYHEYTVATPGAQGRG PRRIVCGSDSTCFWTPDHYSTFKRIIR >gi|302034501|gb|GL383250.1| GENE 203 191303 - 191701 390 132 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3800 NR:ns ## KEGG: HMPREF0675_3800 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 132 1 132 132 251 100.0 6e-66 MTVDVQSGSGPEAGGPIGSGILLVDPAHSCDPIKVATAWREAGWRVMHMSGGADLGSVLA GFGHALSFPSWYGHNLDALRDCLADLGGDTAVLWTGWQPFERDNPQDWGRLVKAIGQRLD EDEVNGFALLLV >gi|302034501|gb|GL383250.1| GENE 204 191726 - 192823 646 365 aa, chain - ## HITS:1 COG:Cgl2124 KEGG:ns NR:ns ## COG: Cgl2124 COG0142 # Protein_GI_number: 19553374 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Corynebacterium glutamicum # 1 363 1 364 366 231 40.0 1e-60 MYPFDPSSPVSADFRDSVSARILSFLDDEKRVIDAIGAELSPVLDAARDYTAGGKRLRPA FCYWGHAAAADQPIEPTGLLQAAASLEFLHVSALVHDDLMDHSDTRRGLPSVHRRFEAAH GIAHGDGPAEQFGCDIAILLGDLLLMWSSQMFTSAPVKADRLAAATPLLDAMRTEVTCGQ VLDVTSQSGMAGSDSESALDLVGRVVEYKCASYTVVRPCQIGVALAGGSDRLQQTMADFG SPIGRAFQYRDDLLGVFGDAELTGKPAGDDLREGKRTVLVAHALDRADSHDAARLKSLLG RPDLDDDDVATARRIIETSGAREAVESTIVQCHDHAVAVLDDAEMTDAGRIALRELARQC VERHF >gi|302034501|gb|GL383250.1| GENE 205 193041 - 193370 249 109 aa, chain + ## HITS:1 COG:AGc3850 KEGG:ns NR:ns ## COG: AGc3850 COG0685 # Protein_GI_number: 15889404 # Func_class: E Amino acid transport and metabolism # Function: 5,10-methylenetetrahydrofolate reductase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 3 93 58 149 312 71 40.0 5e-13 MAPDFISVAYGANGSRCDRALRCTQHMVSTGLRTVGHLTCVAQSVADVEQMVADYAESRI DHILAIRGDMLGGAGQPWVAHPWGLPNATELVRLVKWVHPEACIGREGA >gi|302034501|gb|GL383250.1| GENE 206 193424 - 195685 1420 753 aa, chain - ## HITS:1 COG:Cgl1339 KEGG:ns NR:ns ## COG: Cgl1339 COG3973 # Protein_GI_number: 19552589 # Func_class: R General function prediction only # Function: Superfamily I DNA and RNA helicases # Organism: Corynebacterium glutamicum # 5 719 8 754 755 248 31.0 3e-65 MTAHDSSTTDPRVVESEIAKEQAHVDRVRAQLEIAENKARMLAKAGQDMYRSDRTSWVRE EDGTAMFERDAFSYNAAKRLAVLDAEHEGLVFGRLDLTDDEVRHIGRIGVRDADYEPLVI DWRARTAEPFYRATPSDPMGVVRRRVLRCRDDKVLGIEDDLLDSTSQANLPIIGEGALMA SLSRARDTRMHSIVSTIQAEQDEAIRAPYQGVTTIMGGPGTGKTVVALHRAAFLLYSHRT RLENGGVLVIGPSSVFMSYIERVLPSLGEDSVTLRSIGQVPSDILHFSSDRLDEPRTANI KGSLEMVDVLTRLVNLPMSADPDSLQLRVTVKGEVLTLDASILATTRQRILKRNRYNDGR EAVEVSLRDQLWARVPADVLAAHDLTRDDFDELVSSQASWRMLLNAWWPALSASDALARL ADPAVAEAVTPYWNEETRQLLVSSIPTEADRRGRRNWSIADMALLDELAALLGPVPPEPD ADDPVFIEGGDAEELVTLGDRLHESRHIDEDEPRDTFAHVLVDEAQDISPMQWRMIGRRG RQASWTIVGDPAQSAFPHPNQTRAALDELVGNSPSRTFTLTKNYRSPAEVFDLAADVVVT VQPDADLPQAVRWVGVRPTVVRTDDLWAQVRLQLDEMLTSVDGTIGLVCPAGLVEQARRL VDDPRIITVTTMQAKGLEYDGAVVVDPERIVSETGNPAGGVRLLYVALTRPTQRLAVVGL RKQKSPHRSEANQPVRGAATPAWSEALWSHETC >gi|302034501|gb|GL383250.1| GENE 207 195732 - 197063 331 443 aa, chain - ## HITS:1 COG:no KEGG:PPA0734 NR:ns ## KEGG: PPA0734 # Name: not_defined # Def: putative carotenoid dehydrogenase # Organism: P.acnes # Pathway: not_defined # 25 443 1 419 419 724 96.0 0 MDDDTFNIERQYEPAPGRWRAGDSMDGDNRKIRVHLWHDTVSRWFNRIVAGGTDTMGTVH IVGDELVALAAALRLAQMRHKVTIISSSPRWLESAERPLAPELGATLQIPSAWRDLFAKS GRAMEAELVGIGLNLVTEPDTQISSSMADISLPTDRGAQIHTVRDRYGHRIAHKWRDVLD HADTIWQARRQYGVEHAVTSRPEPLPEPLHVDLPSPLAELSADETRLAITRIFGCWNLVG RDGPTDLQPLLTLLNKRLTRRGVIVDPSPNDSPNAIIDTTAPAPRRSRWHRPARPWSSPI ITVSTSGEMPSNHGMAHRLDWKAEGLVETWSWWDGAQARRICHDYTRPIPNPELGTAWSA WRDRPPMVWRQEGPIPVLAASPASHGGPEPWARLLTGALAAYLTHERLTGEDIRPSNKAI GAAGRPRRSHSSTDRVSTRRLDR >gi|302034501|gb|GL383250.1| GENE 208 196884 - 197678 398 264 aa, chain + ## HITS:1 COG:mlr0493 KEGG:ns NR:ns ## COG: mlr0493 COG0596 # Protein_GI_number: 13470715 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Mesorhizobium loti # 30 250 44 265 268 67 27.0 2e-11 MDRSHRICASCNDPIEPTTDGIVPEVNTDLPVVAIHGITSSPTTWGGLVLAFNIEGVIVH QLSLLGHGPIGIRRGAGTDYPLEAFATDVIEQMDALKVDKCALVGHSLGALVSSMVAQRQ PDRVDRVLLEEMPVPRRVRQDPPPMRTYVDAIFMEVAAFAGRKRFDPKMVWKVSRELLKP HPQWWDGLSRMIMPVLVVGGGKASYLRQDRLSDVARALPDARIMTIDGGHRTHITKGDEF CDIAVPFLTNGKYANRRHNGIQDV >gi|302034501|gb|GL383250.1| GENE 209 197799 - 198257 535 152 aa, chain + ## HITS:1 COG:ML1795 KEGG:ns NR:ns ## COG: ML1795 COG0071 # Protein_GI_number: 15827955 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone (small heat shock protein) # Organism: Mycobacterium leprae # 6 132 6 132 148 108 49.0 3e-24 MARTFDPIREMDRLLSDVTRTPATVAVPMDLYREGDDYTVAVDLPGVDPASIDIDVDDRT LTIRAERAAKVAKEAQWLSRERAMGTFARQLTLGHGLATDCITAEYTDGVLTLTIPVAET AKPRKVEVRHGSTTIDAMTDQAQVGSGEHQEQ >gi|302034501|gb|GL383250.1| GENE 210 198330 - 198971 650 213 aa, chain - ## HITS:1 COG:PA2322 KEGG:ns NR:ns ## COG: PA2322 COG2610 # Protein_GI_number: 15597518 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism # Function: H+/gluconate symporter and related permeases # Organism: Pseudomonas aeruginosa # 2 213 239 450 450 164 49.0 1e-40 MTVLLPVVLMMGKALADIFALKGTAVRSILDFLGEPMFALLLTTLLAIFTLGKVSGMNRD AMSDSVGAALPPIAGILLTVAAGGGFKQILVDTGIAKLLGNGITQSSISPLLMAWLVAVV IPLATGSATVATVTAAGILEPVAASLPSAHAALLVLAIGCGSVFFSHVNDAGFWLIKEYF GISVGQTIKSWSLMETALSVCGVLLVLLVSVIV >gi|302034501|gb|GL383250.1| GENE 211 199205 - 199444 253 79 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3808 NR:ns ## KEGG: HMPREF0675_3808 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 79 8 86 86 95 100.0 5e-19 MLQASHNPLVASPVRIVAAVLEGRVRLMPFEPKQEAIGFHRSMADAVAAHDAKAAAAAMR QIVTEAHQAMSSSMFAASK >gi|302034501|gb|GL383250.1| GENE 212 199615 - 200334 583 239 aa, chain + ## HITS:1 COG:Cgl2475 KEGG:ns NR:ns ## COG: Cgl2475 COG2186 # Protein_GI_number: 19553725 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Corynebacterium glutamicum # 6 218 23 239 250 102 31.0 7e-22 MSQEFLASSVASRLGARIVDGDLQAGDVLRLGDIEQESAASRSVCREAVKILESLNLVRS RRHVGVTVLPSNQWDVLSPKVVHWHMSGNKREQEMSWTNELRIALEPTAARLAAERADGT DLKGLQDAVSGMTEAIRNDDSTSFAKHEHAFHRSLLAATRNPLYIAHVPMLLGYFAEQYD DRNLTSEDGADLVQHRDILDAITMSDPDAAEQSTRALVLGLGRVLPQPTVVSGPAGVAH >gi|302034501|gb|GL383250.1| GENE 213 200399 - 203383 1901 994 aa, chain - ## HITS:1 COG:Rv1832_2 KEGG:ns NR:ns ## COG: Rv1832_2 COG1003 # Protein_GI_number: 15608969 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain # Organism: Mycobacterium tuberculosis H37Rv # 477 992 1 488 489 635 63.0 0 MTDHAENRCGLEGPPPFSSRHVGSVEDDLRYIAETIGVTSPEQIIRDAIPASVLDSNEGE SSVRTPSFPPAAAETTARAELVEIASGNRVTRALIGRGYYGTLTPSVIRRNILENPSWYT AYTPYQPEISQGRLEMLTIYQQLITDLTRLALANSSLLDEATAASEGMLLARRAARKVKF NRFLVHTHLFDQVRDVVLGHAEATGIEVVEADLRDPQSWRPEVEAGCFGVLAPYPDSTGA LWNPSEVFDAVHKVGGITIAECDLLSLTLLAPPGELGADVAVGSSQRFGVPMGDGGPHAA YMSVRSGLERQIPGRLVGVSTDADGNPAYRLALQTREQHIRRDKATSNICTAQVLLAVVA AAYAVWHGPTGLTRIARQVTDRAHQLASALRAAGLDVADQQFFDTIRIRTKGGAKELWNR AREGGYTLDLVDGDILQISVDETVTDDELRELTQLLGGNTDEIRGPADGAWPEDLRRTSS FMTHPVFSSYHTETTMMRYLKRLADRDYGLDRGMIPLGSCTMKLNAAAEMEAMTWPAFSQ MHPSAPVEDQAGSLRLIRDLEIWLAELTGYDTVSLQPNAGSQGEYTGLAAIRGYHVSRGD TERNVCLVPASAHGTNAASAASAGLKVVVVKSHDDGTIDRDDLAAKIAANEGRIAAIMIT YPSTHGVYEDGVRQVCDMVHEAGGQVYIDGANFNALVGWGQFARIGGDVSHLNLHKTFAI PHGGGGPGVGPVAAKAHLAPFLPGHPLNPRNEHPLNGGGTVTHNGHAVSAAPFGSVSVLP ISWAYLRLMGLKGLQFATEVAVLNANYIAHRLHDKIPILYTGQNGYVAHECILDLRPLTA ETGITVDDVAKRLIDYGFHAPTMSFPVAGTLMVEPTESEDLAELDRFCDAMLAIVEEARM VQSGHWPADDNPLINAPHPAARLVADEWNHPYSRELGCYPGMRLGIQRDQERGLDVNTVT RIQAKYWPPVGRVDNTYGDRHLVCSCPPPEAFED >gi|302034501|gb|GL383250.1| GENE 214 203389 - 203760 472 123 aa, chain - ## HITS:1 COG:ML2077 KEGG:ns NR:ns ## COG: ML2077 COG0509 # Protein_GI_number: 15828123 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system H protein (lipoate-binding) # Organism: Mycobacterium leprae # 4 108 6 111 132 115 59.0 1e-26 MELSELKYSAEHEWVAVDGDTVTVGITDYAAEALGDVVFVDVPEVGSDVSAGSAIGEVES TKSVSDLFSPVTGTVSEVNEAITESPELVNSDPFGQGWLFKVSGGQLGDDLMDRNAYLKL TAE >gi|302034501|gb|GL383250.1| GENE 215 203801 - 204835 887 344 aa, chain - ## HITS:1 COG:BS_yqhI KEGG:ns NR:ns ## COG: BS_yqhI COG0404 # Protein_GI_number: 16079513 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system T protein (aminomethyltransferase) # Organism: Bacillus subtilis # 1 343 26 362 362 264 43.0 2e-70 MPVRYSSDLAEHHAVRKNAGIFDLSHMGEIRISGPDSGAALDYALAGKLSAVAEGRAKYS LLLTDEGGVVDDLVTYHLPDGDYLVVANAANAETDLAEFTKRCARFDVTVTDESAQTALV AVQGPKAVTIVLAALQKANTTLDSDEVRDVKYYRCLTGELDGFPVLVARTGYTGEDGYEL YVPAEAAEHLWQLLMDAGGEDLTPCGLACRDTLRLEAGMPLYGHELGTDIHPSQAGLGRV VNFKKEGDFVGRCALENRDTTTDRMLVGLAGEGRRAGRAGYAVVNEGKTVGAITSGILSP TLGHPIAMAFVDPDVAKTGTSLSVDVRGKALNTTVVELPFYKRS >gi|302034501|gb|GL383250.1| GENE 216 205043 - 205471 216 142 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3813 NR:ns ## KEGG: HMPREF0675_3813 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 142 1 142 142 181 100.0 1e-44 MPLSAEEQRRLAELEEALSTDDLDFARSFSRRASATCPHPSRNALEQRRMQHRRARRRQI LLGSVMVLLGLAGVVGGVVLTSGVLAVVGFAIMALAVGVLLSTGGGVMPRSSGVRPRGGQ REPHSESFTARMEERWRRRQSR >gi|302034501|gb|GL383250.1| GENE 217 205498 - 207750 1163 750 aa, chain - ## HITS:1 COG:lin0469 KEGG:ns NR:ns ## COG: lin0469 COG1305 # Protein_GI_number: 16799545 # Func_class: E Amino acid transport and metabolism # Function: Transglutaminase-like enzymes, putative cysteine proteases # Organism: Listeria innocua # 295 606 264 578 721 118 29.0 4e-26 MAELAADRKDGSFMTNPRRAAQPVTQLSEHLDLTKASEYPGLLAIHLAVALAMMLATFSL IGLTTDPSFWIGPTAVIVFLEVVGLLCRHHHWDHAEVQGVQAILVVVIVVMMGGISASAV GSSGSFPVNALHLYRDTLTLIQTTDGHLPPSIGVIWLTTTVVAVLTVLADLLTITLESPG WSLAPLLVIHLAAVLIVRHDTPWWSFALVAASWLIILTVDHALRGGGPLTWLAAAIFSII AITIATVFAAIAPVWGHLDFSHPAAAPSSPVRMSDPTIELRRNLHNTSTASVITYTTNSP DGEYLRMTSLSKVTDRGWGLIPVDLEHSAPESVPGLFGPSRTRTVDINITGFSSQYLPAP YGPIAADVDQTWAWDPQDLTIVSTSADHDHATSDMQYSISAQEPDPDPVTFDNAKAGTPN NSVYTEVPANVPSSIRDLTSRIIKGKSTPVTKAIAIQNWLRDSARFHYDINAPEGDGYQV LENFLLRTHRGYCIHFAASMALMARLEGIPSRVSVGFLPGDHARDTWKIRANQMHAWPEL YFQDYGWVRFEPTAAVAPAPTWTDKETTIPSPSSTPSSSPTPSTQTSTPSPEPSPAAAPT STPTSSPAPISTADHEGFNWAPLSAVLVILVILALPMLIRMLISRRRITRGSIAGIWREI RDLWIDHGLAWPDGTPRRQAAALVTDMDPDTSAAVKKLALAEEMDRWSSKDGHDNSLPDD LGAVKAWLARTPTPRPHWLATWLPTSLVKK >gi|302034501|gb|GL383250.1| GENE 218 207708 - 208709 591 333 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3815 NR:ns ## KEGG: HMPREF0675_3815 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 333 76 408 408 620 100.0 1e-176 MRIALGSQACETVTVERRGGLPLGAARFTDTIPAPLGQSRWSTATIQTPVIPTTRGRFVI GPVMMRTVDPFGMARHHTDLGQVAEVIVTPRIVDLGASGELGGQGFDTRSSAIHAGRRGP DDAMVRDWHTGDSVRRIHWRSTAHRGDLMVRCEEQAWNPSVVIVLDSRARRHVGTGPDAS FEWAVNAVASISTRLASDGYVTHVCDSSGTLKGDILDALVDEPLRPDTALTKAIESCQGI DGPAIAILGRLETTDIDPLVDLRRDRVAGLALVLDSDTFTARRFRSPLEQAEEHERAVAE LDDAGWAVVPVDSRTSIDSAWQNLLQTARTAAL >gi|302034501|gb|GL383250.1| GENE 219 208931 - 209974 564 347 aa, chain - ## HITS:1 COG:BH0604 KEGG:ns NR:ns ## COG: BH0604 COG0714 # Protein_GI_number: 15613167 # Func_class: R General function prediction only # Function: MoxR-like ATPases # Organism: Bacillus halodurans # 41 340 15 310 318 274 46.0 2e-73 MNHRESQPVIPAHAQPLETVDPRAASIDGVVAITNAVRSAVAGAIEGKSERIDTALVVLL AQGHLLVEDVPGVGKTTLARALGRAIDCTVHRIQFTPDLLPSDITGVSVYDQEKREFVFK PGGIFANIVVGDEINRASPKTQSALLEAMGERQVSADGLTHPLEAPFMVMATQNPIEMEG TYRLPEAQRDRFMARITMGYPTRSAELAMLEHHGATSPLDEVRPVTDTQTIRRLISTVLG VHVAVDIHEYVLDIIGATRSHESIRLGASPRAALHLVRACRARAAMSGRDYVIPDDVQAL AAPILAHRLVFSGRSGIASHESARAAESVIGSILRQVPLPERAHQDR >gi|302034501|gb|GL383250.1| GENE 220 210250 - 210678 447 142 aa, chain + ## HITS:1 COG:ML0905 KEGG:ns NR:ns ## COG: ML0905 COG2001 # Protein_GI_number: 15827425 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mycobacterium leprae # 1 141 1 141 143 139 47.0 1e-33 MFLGTHTPKLDEKGRFFLPAKFRDELDDGLVITRGQDRCLAIYPTETFVEMTREIAKGSV SVKKVRDYQRMLAAGASDTAPDKQGRVMIPPMLRRYAALNKEIVVVGAITRVEVWDATEW EKYSEAQEEAFADMNEEVFAEQ >gi|302034501|gb|GL383250.1| GENE 221 210827 - 211834 715 335 aa, chain + ## HITS:1 COG:ML0906 KEGG:ns NR:ns ## COG: ML0906 COG0275 # Protein_GI_number: 15827426 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis # Organism: Mycobacterium leprae # 12 332 42 368 372 267 49.0 2e-71 MATDAIGSDAVHIPVMRARILDLLAVVLKSGRRVHVDGTLGMGGHAEAVLRRFPDVELVG IDRDQQALTMAEARLEPFADRVHLVHAVHDELPEVLDDLGLDYVDSVLLDLGLSSFQIDE VERGFSYSVDSPLDMRMDQSSGRTAAQILNESDPGALVRMLREYGEEKFADRIVRAIVTE RDRQPIETSGRLVEIITEAIPATVRRKRHSHPAKRTFQALRIAVNREMETLPAVLPRALD RLDVGGRIAVLSYHSLEDRPVKEAFRDACADTAPAGLPMVPESMAAKFNPVTRGAERPDA DEVATNPRSASARLRVIERVRSGPVNRQHATKESR >gi|302034501|gb|GL383250.1| GENE 222 211831 - 212295 459 154 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3819 NR:ns ## KEGG: HMPREF0675_3819 # Name: not_defined # Def: putative cell division protein FtsL # Organism: P.acnes_SK137 # Pathway: not_defined # 1 154 1 154 154 246 100.0 2e-64 MSAELAPRPQQARTAAARPTSLRPVLRALPQRVRQQQMGRLGFAILIVVMLAAGLAGLLV LNTTIQAQSMQIAQETRNLNVLQHQQAVLAAEVDHLRGPQNLQEQAKKLGMRPNPYGSYI DLRTGKVIGTQTKVDGKEVPGVIGETAKPEVGQP >gi|302034501|gb|GL383250.1| GENE 223 212430 - 214217 1235 595 aa, chain + ## HITS:1 COG:CAC0329 KEGG:ns NR:ns ## COG: CAC0329 COG0768 # Protein_GI_number: 15893621 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Clostridium acetobutylicum # 7 569 15 583 605 237 29.0 4e-62 MASQRGRLTIVMAVFLVLAVSLASRALQLQAIEAPAYAASAAARMKYTYALQPNRGELTD RNGIVMAQTQPAVLVFVDPRMISRNGVDERVTMTREQQEKAAAAPKAVAKILATRLGGQP EDYRKAVTATDAKGKLSRYSVVRHHVDSYTFDLIKKDMKQGGWYGVFSSNDPIRTYPSGQ VASNVVGFVNAEGKGAGGFEYSHNKQLAGVPGKESYEASTWGRIPLGSNTLVPAVDGTSY TLTLDAQLQLMAQQALGTAIKNAKAKSGEIVMMDVTNGEVLAMASMPTFDSNKPGKAKEN QTRNRVIQDAYEPGSVQKVLTMAALTDQGIITPDSHVVVPRALSSGGGKITDAEPHGTEY LTARGVLVHSSNIGTALFARKLDKATMVSYLKVFGLGAPTRIGLPGEASGQIPKPTMPDY TRDQVAFGQGLSVTALQEAAAVAGIVNGGVYHSPTIIKSAVDGHGEPSEIPKTTTRRVIS QRASEEVRDMMENVVSTAKGRPIPDYRMGAKTGTAQRIDPECHCYHGYISSFIAVAPIEK PRILTYVVINQPTNGHTGTAVAQPAARQLMSVALPRYGVQPSTDKARKEPLEYQP >gi|302034501|gb|GL383250.1| GENE 224 214214 - 215803 1214 529 aa, chain + ## HITS:1 COG:Cgl2113 KEGG:ns NR:ns ## COG: Cgl2113 COG0769 # Protein_GI_number: 19553363 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl tripeptide synthase # Organism: Corynebacterium glutamicum # 45 514 32 504 521 341 49.0 2e-93 MSPESTVTPTPPAGAALRPSQGDPVGWTDLVASFDSCRANDNGPAITGITLDSRQVRPGD LYVGLHGLHAHGASFAASAVESGAVAVLTDEDGATLAAEAGVPIIVVDDPRAAMAVAAAK IFGRPSDAMTMFGITGTNGKTTTAFLVEAGLRAAGHHVGTIGTIGFRLDGEELPSARTTV TTPESPDLQGLFAAMAERGASDVVIEVSSHALALQRVDGTCFDVVAFTNLGRDHLDFHNT LDNYFNAKARLFTPDLARVGVINVDDPRGRQLVERMQANGVKAVTTSIHQPSDYQVTSWQ AARAGAIFDVSTPSGERTLELSLPGEFNVRNAAMALAMLEAAGLAFDDVADGLCSAQVPG RMERVDLADDAPTALVDFAHTPQAIASALDAARSSVDGGRLIAVLGAGGDRDVAKRGPMG QIAAERADIVIVTDDNPRTEDPAVIRAAVLEGAHEAAGDGVIVIDGGRRREAINEALRMA EAGDVICVLGKGHETGQNIGSEVLPFDDREVIRAEWKIMARQSEEDQAR >gi|302034501|gb|GL383250.1| GENE 225 215800 - 217257 902 485 aa, chain + ## HITS:1 COG:Cgl2112 KEGG:ns NR:ns ## COG: Cgl2112 COG0770 # Protein_GI_number: 19553362 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide synthase # Organism: Corynebacterium glutamicum # 24 474 27 486 514 275 44.0 1e-73 MRVLDVATLAQWVEAAPVNDSAQVGPDVVIDTRKVTPGALFIALPGTRVDGHDFTQAAQD TGAAAVLVTRRTDAQLPHLVVDDGQAGLSRLARHVVATERERGMRTIALTGSSGKTSTKD MLAQILETFGPTVAPVGSFNNEIGVPLTACRSNENTSFLVSEMGTRGLGHISWLTSIVTP DVAMVLNVGNAHLGEFGSREVIAQAKGEIVEALSVDGWAVLNAADTLVAGMAPRTRGHIA WFSPDADHRRPDADIEVWAESTHADDLDRHSFTLAARRGESTWRSPVRLMTMGAHQVANA VAATAAALAALAMNDDIDDQTVTRIAEALSNAVSRSAMRMQLRERADGLVLVEDCYNANP DSMAASLTAMGHVLATRRVRDPQTRGVAVLGDMLELGQDSARLNAESGRLAAHAGFDVII AVGDEAENIAEGARAEGARVIVSTVEGASGSLGWTSHDVVLLKASRGLALERVGREVFEE REAQA >gi|302034501|gb|GL383250.1| GENE 226 217254 - 218324 949 356 aa, chain + ## HITS:1 COG:ML0911 KEGG:ns NR:ns ## COG: ML0911 COG0472 # Protein_GI_number: 15827431 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase # Organism: Mycobacterium leprae # 1 354 1 355 359 303 47.0 3e-82 MKNILLAGAVSMIGTLVGTRWFIHWLAAKGYGQFIRDDGPTTHKTKKGTPTMGGAVIIVS VLLAYLVAHLVTWTHPSISALLVLWLFSGLGFIGFLDDWTKISKQRSLGLKPKGKLLGQA FVAITFAIGVMYFPDVHGVTPGSPAISFLRDISWLYLPVWLGIVWVILLISGSSNAVNLT DGLDGLATGASTMVFGAYTVLSIWQFNQWCSRPTTAGNHCYAVRDPHDIAVVAIAIAGAC FGFLWWNAKPAQIFLGDTGSLALGGAVAGMAVVSRTELLLVIIGALFVIETVSVMLQVSV FKITGGKRVFKMAPLHHHFELKGWAEVTVVIRFWIICGLAVSAGLGIFYAEWVAGQ >gi|302034501|gb|GL383250.1| GENE 227 218306 - 219802 1042 498 aa, chain + ## HITS:1 COG:Cgl2110 KEGG:ns NR:ns ## COG: Cgl2110 COG0771 # Protein_GI_number: 19553360 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramoylalanine-D-glutamate ligase # Organism: Corynebacterium glutamicum # 28 486 15 458 472 245 38.0 1e-64 MGGRAVTFSGKVDLSAADRLFDWSGVHVVIAGLGTSGYAAADALLELDATVLVLDDSDDD SHRDKGGLLEVLGAEVRLGPGSASDLPEETDLVVVSPSWRPTQPLVARALTRGIPVWGEP ELAWRLMHPDRVIPWLAITGTNGKTTTTQMTESILHAAGLKACAVGNIGRPILEAMADEI NYDVFAVELSSFQLHWSNSLSLHSAAVLNLHQDHLEWYAHESDPLGSYAADKARIYHQVT NSCVYNVADPATEHMVEDADVVEGARAIGFTTGTPGPSMIGIVDGLIVDRAFVEQRATSA MKLARLEDVHPFAPHNVENALAAAALTRSFGVPAPAVGQGLRDLHLGGHRIETVHQAGGI TWVDDSKATNPHAANSSMRAFEHIVWIAGGQAKGTHFDNLVTTHAGKLRGVVVLGTDRGI IARSLAEHAPQVPVVVIDDMSREAMARAVHEAAKMARPGDTVLMAPGCASLDIWPGYAAR GEDFANAAQHVDGPDADG >gi|302034501|gb|GL383250.1| GENE 228 219762 - 221084 832 440 aa, chain + ## HITS:1 COG:ML0913 KEGG:ns NR:ns ## COG: ML0913 COG0772 # Protein_GI_number: 15827433 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Mycobacterium leprae # 51 415 64 429 534 187 36.0 4e-47 MLLNTLTGQMPMAEKSVDSRVRRTTRRRTPGSWLRHLLRLDGGDGSSRRLLAQPFLDYYV ILATTVLLCGIGALMGLSSSSVYSQSLGHGPYHFAIRQILFLVVGAIAAAVVSRLSETHL RQLGGFAYAVVCLMLVLVLTFLGSDAGKGNQSWLSLGPVSLQPSEFAKFALVLLGASYMS SRRGEMATPKGVGGYLGLYGVVGLLVVAQGDLGTTMIIGLIMLAQMWNFGVPKRYLGALI GLGLLAVLLLTAITPYRAERVLSFLHPDNGASTSQQPLSAIYALATGGWWGVGIGASRQK WGGLYDGAQNDFVFAVLGEEMGLLGTLGVILLFTLLIWAGVRTAMRQDSLFRRSAASTAT AWIAAQALINMSVSLNLLPVVGVPLPFISIGGSALVSALLAVGLLLACARTEPDARRSTA ASQRTEPARVTSVVDGGNRG >gi|302034501|gb|GL383250.1| GENE 229 221127 - 222245 734 372 aa, chain + ## HITS:1 COG:Cgl2108 KEGG:ns NR:ns ## COG: Cgl2108 COG0707 # Protein_GI_number: 19553358 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase # Organism: Corynebacterium glutamicum # 2 331 8 324 363 228 43.0 1e-59 MVNVVLAGGGTAGHTSPLIATAMALQERGATVSCIGTPRGLEGRVIPEAGLQLDMIPPVP LPRTVNADLFKVPARLAGAVRKAGEVLQRRQTDVVVGFGGYVSLPAYLAARRAKIPVVIH EQNAVPGLANKIAARFAVFVGTAFPDTPLPKARFVGMPLRSQITDLADASGQARAERCAR ARADLGLDINRPTLLVSGGSQGAVAINEAVVAARTRLLADGVQILHVLGPKNIRGATRIT DELTGASWLPMGYVDDMASAYAAADLMVARSGAGTVVETATVGLPTIYVPLPHGNGEQAR NATSAVDAGAGVVVANADLDVERLLAETARIHDADVLAQMSAAGRGLMPAHAAEEMAVRV ISAATSIDPTIG >gi|302034501|gb|GL383250.1| GENE 230 222257 - 223672 1021 471 aa, chain + ## HITS:1 COG:AGc3796 KEGG:ns NR:ns ## COG: AGc3796 COG0773 # Protein_GI_number: 15889377 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate-alanine ligase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 12 457 4 453 471 304 42.0 3e-82 MSLREPVELLDPSAVGPVYFIAIGGAGMSGVARIYHDLGVEVRGSDQVDSANLRDLASLG VQTWVGHDPSHLAGARTVVVSSAIRPDNPELVEAHRLGLRIWHRSAALAALMLGREGVSI AGTHGKTTTTGMVATMLDCAGADPSYVIGSPLAATGMSSHLGGGEAFVVEADESDGSFLQ YPSQIVVVTNVEADHLDNWGTPQAYFDGFVSMATRPEVRYVVTNADDPGAAELACRLEST GTVRVVTYGESEQAEVRLVDLDLNGTTASATLVHGPTQGRLELQVPGRYNLSNAAAAYCV GSLLGISHQDLLTGIASFTGTLRRFQLVGRVADVSVFDDYAHHPTELRATLGAARRVVTG QGRVIACFQPHLFSRTRDFAGEFGSALTLADRVIVSDIYPAREDPIPGVTGELVHDAVIA AGGDSRYVPDKQDLPEALAEEVRPGDLVITLGAGDVTLVGPVLVGLLEGKA >gi|302034501|gb|GL383250.1| GENE 231 223672 - 224385 239 237 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|88856514|ref|ZP_01131171.1| 50S ribosomal protein L6 [marine actinobacterium PHSC20C1] # 11 233 30 260 266 96 29 9e-19 MPVSDISVAMELRRRRRRKRNRIIAGVVAAVVVLVLVAMWIVRSSSLLCVNTIEVHGTRL VTASQVEQVAKIPKGQPLARVNTDDVAARETRMDIVQQAEVYRKWPHTVVIDITELKISY QVKTLGGYLWIDPSGRIFNRTAKPTPNVVWATTSSGNRGLLRDVATVADSFPTELRRHVD HIEATSRDAIVVVLSGKRTVVWGSADQSVLKAKVTTAMLHVKATRYDVSSPEHPTSR >gi|302034501|gb|GL383250.1| GENE 232 224508 - 225761 970 417 aa, chain + ## HITS:1 COG:MT2209 KEGG:ns NR:ns ## COG: MT2209 COG0206 # Protein_GI_number: 15841642 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division GTPase # Organism: Mycobacterium tuberculosis CDC1551 # 4 314 25 335 401 381 75.0 1e-105 MAIPSQNYLAVIKVVGVGGGGCNAVNRMIEAGLKGVEFLAVNTDAQALLTSDADVKLDIG RDLTRGLGAGADPDKGRQAAEDHADEIEESLKGADMVFVTAGEGGGTGTGAAPVVAKIAR SLGALTIGVVTRPFSFEGHRRSSQAEQGIDNLRDEVDTLIVIPNDKLLDMTDQQIAILDA FKQADQVLMQGVSGITDLITTPGQINLDFADVKSVMSNAGSALMGIGRASGEDRARAAAE MAISSPLLEVSIDGARGVLLSIAGGSDLGLFEVASAANLIEAAAHDEANIIFGTIIDDAL GDEVRVTVIAAGFENGQLTSTKQPGISQRPASRPAMTNRSSAGVFGAGTGSAASTSAGSS SSASRQPADNQRPTPIRPQTQGSPFGKAQSQQQSHPVEPVNPPEEPDDDLDVPDFLK >gi|302034501|gb|GL383250.1| GENE 233 225763 - 226548 414 261 aa, chain + ## HITS:1 COG:Cgl2104 KEGG:ns NR:ns ## COG: Cgl2104 COG1496 # Protein_GI_number: 19553354 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 6 260 4 246 246 132 37.0 8e-31 MLRFVIDPGANHGVGVAFTDRVDASGQGRGGAGFEGFNLGRADEDPTVLEHVDSLRSRLG LGPVMVCHQVHGNEVWRVRPDDVEGWIPQRYLGNRVEGQPKLPIADAMVTDLPGVALAIR VADCMPIMLADPKAGVVGAAHAGRVGFLAGVLPATVKIMCDMGATELLAWLGPHICGRCY EVPAEMAEQVWAKYPATRAVTRQGAPALDLGAGALAQLESLGVAAVGLDPCTFEGDDFFS HRRDHGAGRLAGLVWNAHDAH >gi|302034501|gb|GL383250.1| GENE 234 226675 - 227193 577 172 aa, chain + ## HITS:1 COG:ML0920 KEGG:ns NR:ns ## COG: ML0920 COG1799 # Protein_GI_number: 15827440 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mycobacterium leprae # 60 169 99 207 210 117 53.0 8e-27 MAGIGRKIASYVGIVDDRRYDEEDLPDEELTTEVYSDDGYEPSSEVTQLHHHDSNEQHGR GHKAVQHRRRSELEEPSIADINRILTVHPRNYNEARTIGEQFREGIPVIMNLTEMDDADA KRLVDFAAGLIFGLRGTIERVTSKVFLLCPRNVNVTPEDKARIASGGFFNQS >gi|302034501|gb|GL383250.1| GENE 235 227204 - 227494 292 96 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3832 NR:ns ## KEGG: HMPREF0675_3832 # Name: not_defined # Def: YGGT family protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 96 1 96 96 123 100.0 2e-27 MILTGTILTWIIEIYTVLLIVRMLMSWVPLLIRGFEPRGVLAVVFEAVYTVTDPPIKFFD RLVPPVGFGNVGFSVGFIIVFVLLAILQRVVIVIFW >gi|302034501|gb|GL383250.1| GENE 236 227647 - 228732 1010 361 aa, chain + ## HITS:1 COG:no KEGG:PPA0765 NR:ns ## KEGG: PPA0765 # Name: not_defined # Def: putative immunogenic protein antigen 84 # Organism: P.acnes # Pathway: not_defined # 1 361 1 361 361 491 100.0 1e-137 MTLTLEEVRKVRFPMVKRPGEGYRAIEVDDFVDKVEAAFMTLTDENERLKAQVEALRSGE PGEQRPDQDLLNENEHLRAQVEELRSQQNGRSVNSGEVDRAKAAQQDAEKRARQLEQERV SLQSQIEELRQAARRPGQDIDPAEVARLRSENERLGAQLRDAQSLAARSRTSSVAQQPAT TDDGVRKLVVTTSAEASPAVVRMVELALADAERVVHEAESEAGRKVQAAETKAHELTVDA QTRAERIESSARVNAEKLTSDAKSNADRVNADAQTRRTELFRELEAERDNLAGRVDHLRS FEASYREALTSHLRAQADNLDQGVFEPAELPELLKSENRVAPGGSSTPRLDALIGRGQQQ N >gi|302034501|gb|GL383250.1| GENE 237 228953 - 229375 333 140 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3834 NR:ns ## KEGG: HMPREF0675_3834 # Name: not_defined # Def: C4-type zinc finger protein, DksA/TraR family # Organism: P.acnes_SK137 # Pathway: not_defined # 1 140 1 140 140 256 100.0 2e-67 MSDHDVEAIAASLPVRDGDEPWTADEISEIVGTLESDVQRMGTALAKAENDLADLMKQGN DGAGMDTIDVGSSQFERDQEISVTRNARAVYDQSKLALQLLDGGTWGTCESCGEPIGKAR LQAFPRATMCVKCKQRQERR >gi|302034501|gb|GL383250.1| GENE 238 229429 - 229887 262 152 aa, chain + ## HITS:1 COG:MT1591 KEGG:ns NR:ns ## COG: MT1591 COG0597 # Protein_GI_number: 15841006 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Lipoprotein signal peptidase # Organism: Mycobacterium tuberculosis CDC1551 # 1 152 36 186 202 108 42.0 3e-24 MVAIGVLGYGLDQWTKAEAVARLDPYDPPSWFGGFLTLRLIRNPGAAFSMGSTATVLISL FAIAMLIAVCVWGVPRARHRWSLIACGMLIAGVCGNLTDRIFRAPGPLRGHVVDFMSLPH FAVFNVADIFITSTAILVVVVAVFGHHEDDAG >gi|302034501|gb|GL383250.1| GENE 239 229929 - 230849 504 306 aa, chain + ## HITS:1 COG:Cgl2087 KEGG:ns NR:ns ## COG: Cgl2087 COG0564 # Protein_GI_number: 19553337 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthases, 23S RNA-specific # Organism: Corynebacterium glutamicum # 4 305 9 309 310 360 60.0 2e-99 MSVLLVPDGLDGERVDVAAARMSGVSRSRISSLIEDGGVFLNGQQVSRASVRVATGQMLD VDLCDPVATPSITPQIVEGMRIIHDDSDIVVVDKPAGVAAHPSLGWEGPSVVEHLAAAGF AISTSGAPERQGIVQRLDVGTSGLMVVAKSEHAYTLLKQAFRDRTVDKVYLALVQGHPDP FTGTIDAPIGRDHRHDWKMAIVDGGRHSVTHYETVEAFRHATLLKVHLETGRTHQIRVHM AAIKHPCCGDPLYGCDPALAKELGLERQWLHAGELSFTHPGSGEWVTFHADLPADLQNAL DVVRQA >gi|302034501|gb|GL383250.1| GENE 240 231024 - 232400 1422 458 aa, chain + ## HITS:1 COG:Cgl2036 KEGG:ns NR:ns ## COG: Cgl2036 COG0469 # Protein_GI_number: 19553286 # Func_class: G Carbohydrate transport and metabolism # Function: Pyruvate kinase # Organism: Corynebacterium glutamicum # 4 457 26 471 477 421 51.0 1e-117 MKELMEAGMNIARLNMSHGDYSEHQERLDLVRSVSKELGLNVAALADLQGPKIRTGLFEK AEGESNGKIDLKIGGKFTITTDDIVGNQERVSTTFKGLPQDCKPGDVILIDDGKTVLQVD SVSGNDVNCHCTVAGPVGDHKGINLPGVAVSIPALTKKDEENLRWALKAGIDLVALSFVR HGSDIDRVHEIMDEEGRTVPVIAKLEKPQAIENLDEIIDVFDAVMVARGDMAVECPLEEV PLIQKQIIEKARLQAKPVIVATQMLESMIHAPRPTRAEAADVANAILDGADGVMTSAETS VGDFPGETVRTMAKIVESTEARGLDKIAKIDWDPHTTSGIMSKAAAEIAERAEAKFIVAF TKSGDTARRIARLRPSTPLIVFTSDETTTKTLAWVWGAHAVVTPVFKNAEELYRWVNAYL RDKGFVPVGDRVVVLSGSPMDIPGKTNNLRILRIKEDD >gi|302034501|gb|GL383250.1| GENE 241 232682 - 233113 182 143 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148985194|ref|ZP_01818433.1| 50S ribosomal protein L19 [Streptococcus pneumoniae SP3-BS71] # 18 128 11 117 124 74 39 4e-12 MAMRSGFLDRRPVLVGLVFLGGCLGTLIRSVIAHAWPSRADGVPWGTLAINLVGAFVLAT LLELLVHAGPDRGVRRAVRLCIGTGLLGGFTTYSALTVEAGQRVMSGQWLWGIAYLLTSV AAGALLAWVVIAAVRCVMGKRSS >gi|302034501|gb|GL383250.1| GENE 242 233116 - 233481 271 121 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3839 NR:ns ## KEGG: HMPREF0675_3839 # Name: not_defined # Def: putative CrcB protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 121 3 123 123 191 100.0 6e-48 MLWVCLAGGLGAVARFLLDSRINSRFSVPVPLGTLVINVMGSLLLGLITAAALNHLGFSQ NLKEPLGTGFCGGFTTFSTASVETARAAYGCGRRVGALHCMGMAIAGVLAAILGLALGSR V >gi|302034501|gb|GL383250.1| GENE 243 233735 - 234382 705 215 aa, chain + ## HITS:1 COG:MT1662 KEGG:ns NR:ns ## COG: MT1662 COG3707 # Protein_GI_number: 15841081 # Func_class: T Signal transduction mechanisms # Function: Response regulator with putative antiterminator output domain # Organism: Mycobacterium tuberculosis CDC1551 # 12 209 4 200 208 205 59.0 4e-53 MQGITVSKPQDLTRSTSDSGAEAEHPRVVVAEDEALIRLDLVELLEEHGYEIVGQASDGE EAVRLANELEPDLIVMDVKMPKMDGITAADKIAEDRICAVVMLTAFSQRDLIKRAKEAGA MAYVVKPFDASDVIPAIEIAMARFAEIRGVEDEVMDLEERLESRKIVDQAKGILQTSLDL TEPEAFRWIQKTAMDLRKSMREVAQGVIDHAESEK >gi|302034501|gb|GL383250.1| GENE 244 234402 - 234815 201 137 aa, chain - ## HITS:1 COG:PA1618 KEGG:ns NR:ns ## COG: PA1618 COG2050 # Protein_GI_number: 15596815 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized protein, possibly involved in aromatic compounds catabolism # Organism: Pseudomonas aeruginosa # 21 137 21 138 145 72 34.0 3e-13 MTYSVPEHPLPDWLAQLVSPLDDKLGVKVREISPHRCVVTAPLDGNTQPMGLWHGGGSGV LVETAGSLAAMAHARTLEHSAVGTELSVSHLRPPHGHQVIATATAVHLGKRTTTHIVEIV DDEGRICAIGRMTCQVI >gi|302034501|gb|GL383250.1| GENE 245 234818 - 237565 2392 915 aa, chain + ## HITS:1 COG:ML1381_2 KEGG:ns NR:ns ## COG: ML1381_2 COG0749 # Protein_GI_number: 15827719 # Func_class: L Replication, recombination and repair # Function: DNA polymerase I - 3'-5' exonuclease and polymerase domains # Organism: Mycobacterium leprae # 354 915 9 578 578 567 53.0 1e-161 MKHATVCHLDRIPLSVASSKVNDMSETTQPILMVLDGHSMAFRAFYALPVENFTTSTGQH TNAVHGFVAMLINLLRNEKPTHVAVAWDLAGGTFRTTEYSEYKAGRAAIPPEFPGQIDLI KEVLDALRIVHLSKENYEADDILATLSTRATTEGFKTLLVSGDRDAMQLVNDQVTVLYPR KGVSDLARMTPEAVEEKYLVPPARYPELAALVGESADHLLGVPGVGPKTAVKWLTAYDGL ENLIRQADTVKGKAGQSFRDHLDDVIRNRKLNALVRDLDLDLTLAELARHPWDPKATRAV FDTLEFRTLWDRVRALATESDADGVDEVDDTLEISGTVLEPRTLNDWLSTTAGRIGVDVT GSWGSGSGDVEAVALGGVDGNAVWFDAAELSPEDEDVFAAWLADKDRPKVMHSAKGPVEA LAERGWEVAGLTCDTELASYLLHPDRRAHKFDDAVRTHLNVALGEAEENSDQAMLDFGED HFAESMERAVAVTRLADVMEKEVEARGGAELLHDVEMGVQRCLISMERAGIAVDTDIFEG LRSEFDERVTRAQEAAWEAAGEKINLSSPKQLQGVLFDKLDMPKTRRTKSGYTTDADALA GLYETTEHPFLAHLLEHRDAIKLRQTVDGLLKEIRDDGRVHTTYMQTVAVTGRLSSKDPN LQNIPMRTEEGRRIREGFVVGEGYESLLSADYSQIEMRIMAHVSGDQSLIDAFQSGQDFH TVTASHVFGVAPEDVSVAQRSKIKAMNYGLAYGLSAYGLSNQLKVSVGEAKELMADYFSR FGKVHEYLEEVVDQARRQGYTETLLGRRRYLPDLTSTNRQRRDMAERAALNAPIQGSAAD LIKLAMLATDQKLAEAALTSRVLLQVHDELILEVAKGEEEKVREIVTNAMGHAMDLSVPL TVSIGVGRSWFDAAH >gi|302034501|gb|GL383250.1| GENE 246 237728 - 238426 271 232 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167010850|ref|ZP_02275781.1| ribosomal protein L36, putative [Francisella tularensis subsp. holarctica FSC200] # 1 222 215 429 436 108 29 2e-22 CVNTMFGGVMPGEKTTEFAIISLLTAAGIGVTVPEGINSLCCGTPWKSKGMTQGYATMRR RVVDIMRQSTRDGELTVISDAVSCSEGFVHELEYEGVKDIRVVDAVQYVADEVLPIMPGL PKVASAALHPTCSSTRIDWNASLQRCAEAVADEVVVADAWGCCGFAGDRGMLHPELTKSA TRREATELAEREFDLYLSANRTCELGMERATGKPWRHALSVLAERMVEYAPA >gi|302034501|gb|GL383250.1| GENE 247 238366 - 240570 1127 734 aa, chain - ## HITS:1 COG:PA4772_1 KEGG:ns NR:ns ## COG: PA4772_1 COG0277 # Protein_GI_number: 15599966 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Pseudomonas aeruginosa # 29 518 23 513 513 370 41.0 1e-102 MNRSARSPFPSSLLTDLLEALGESKVSQDPLDLAAVAPDASHYLLTPSVLVRAGSTSDVA AAMAAAKRHKVAVNFRSGGTSLSGQGLTNGVMVDARRSFRGIEVLDGGRKVRVQPGATIV AVNSVLARYGRKLGPDPASSVACTLGGVLADNSSGMSCGTVANSYRTLDSMIFVLASGTV IDTADPQCEDKLAHDEPELVETLMALRDQCREQARADEITFQFSRKNTMGYGLNAFLDYD TPAQILSHLMIGSEGTLGFISSAVMNTVKIMPNLATALLHFPTLDAATKALPALVKSGVT VTELMDSSSLQLCRDDPVNGHIIPPAPGSGDAALLVEYHCPDRKSRNEAVAAGNSVTSEL DLVNKPTFTDDPAVRGPIWTLRSGLYAKVAGTRQSGQTALLEDIAVPVENLAAVCEDLQQ LFSEHNYPESIIFGHAKDGNIHFLVIEDFRNKAGLDRYEKFTEDMVTLVLNTHGTLKAEH GTGRIMAPFVARQYGPDLYRIMRQVKKSVDPAGVLNRGTIITDDPKLHLKEVKLTPTVQD EVDRCVECGYCEPVCPSRDLTLTPRQRIVMQRAIAQARADGDEVLATDLEERATYPVVQT CAVDGMCQTNCPVHINTGDLVRRLRAEHNPAAWQATWDLAAKGWGPFVTAASAGMSAIKP VPAAATNVLTGAARAVLGADRIPQVSDELPGGGKRRSSGHRSAPHGRPEVVYLRPVSTPC SVASCRARRQPSLR >gi|302034501|gb|GL383250.1| GENE 248 240650 - 241426 592 258 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3846 NR:ns ## KEGG: HMPREF0675_3846 # Name: not_defined # Def: sortase family protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 258 1 258 258 406 99.0 1e-112 MTDRSPRRQEPSTRSTPSNSSTTHAGDSAQPGGPKWRIVALVVVIALIIAAIAVIFIQRN NDSDSAAGAASSTTATTTSSTSGIPAASAAKKGPVPAGCMKTPKPIVPVKYSIDGMKASA KVLSRGVDETGAAGAPPKNDSSSMAWFNQGPKIGSDKGNTVLTAHTYHKGGALGNRLYDK NNGIKKGDIIRLTDKTGQTVCYRYDHDTKVMVKDYNPNSNILYDNNGPAQAAIVICWDYV KKTGEFDSRVIFYAYPVA >gi|302034501|gb|GL383250.1| GENE 249 241751 - 243247 2531 498 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50842265|ref|YP_055492.1| 30S ribosomal protein S1 [Propionibacterium acnes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gi|302034501|gb|GL383250.1| GENE 250 243468 - 244871 950 467 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3848 NR:ns ## KEGG: HMPREF0675_3848 # Name: not_defined # Def: HtaA # Organism: P.acnes_SK137 # Pathway: not_defined # 1 467 12 478 478 813 100.0 0 MTTSAMRKIVASVLGAILALTGVLITPAAWAAGPTVTVIPVGREGGDITISGKGFSTTGF GVYVAVAPASVPEFYGNSDKFYGYDPSKDTTESPSTIWVYTPSQKAIGSRFAQGRPMNND GSFTITMKAPPFEQGKDFVVLTTKAHGVGKTDHSDDTRTPVTYREATPAPTGPKTPIAPS KQPSKQAAPSKQVKPSKQAGPNKQSTTPQQKTAEHRSQTPAAHRTMTKQVCTIGASKVTS GSLTWGIRTSFTSYLRGPIANGSWKLSGGANWNGSAFTFPLTSGSFDPATKSGSLKYSGS VHMTGHHGILDMTLAEPSLQIKGSTGHLYLDVKSSSMDGKKTNYGRVDFATFGVSVSGNA AIKGSPVKLTATGAKAFAGFYRAGEPMNPLSTNLTLSAEKVCHNVTVDAVTGKVIGDDSG KGAGRGLPVTGAEGPSSDEIDLGIVGGLALTAVVSTVVVCRRYAARI >gi|302034501|gb|GL383250.1| GENE 251 244984 - 246096 635 370 aa, chain + ## HITS:1 COG:Cgl0385 KEGG:ns NR:ns ## COG: Cgl0385 COG4558 # Protein_GI_number: 19551635 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type hemin transport system, periplasmic component # Organism: Corynebacterium glutamicum # 55 367 42 354 359 287 48.0 3e-77 MIRMYRRVAGVGLALTMLVAGCGHSSSTSQGPATSSTPVPSVATSSTRAASATSQAARDL PDPHTLRGLTEVPELPDPKPVEGSSAQKLPVTVTDVEGNKVTIKSTSRILALDLYGTLSR TLIGLGLGDKIVGRTVSSTEKQLHDRPVVTENGHVLNVEAVAGLKPSVIIADRSVGPKEA LDQLRKSGIPVVLVDPHRSVGSTPQLIRTIADAVGKPDAGEALVKRTQEQIDQAKKQIAA WKPAKPMRVAFLYVRGNAGVFFILGSENGASELIQGVGADDVASDKGITTLVPANAESLV SINPDAIFVMRDGLASTGGMKGLLARAGVANTTAGRKQRVISIPDGISLSFGPQTGEVLT AVAKALYGVK >gi|302034501|gb|GL383250.1| GENE 252 246093 - 247154 753 353 aa, chain + ## HITS:1 COG:Cgl0386 KEGG:ns NR:ns ## COG: Cgl0386 COG0609 # Protein_GI_number: 19551636 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Corynebacterium glutamicum # 13 346 19 353 358 293 54.0 4e-79 MSALSQPVVQRSGIERRTRVRVISTICLVIIVCGLVLLSAMVGQYRVEAADVIKIVFGRS ATDAMAESVLWQIRFPRIVLGLLVGASLAVAGAVMQALFSNPLAEPGVIGVSSGAAVGAS IMIVVAPNFLSGFGVPAAAFVSGLLAASSVYIMARSGRRAESTTLVLTGIAVTAVCSAIT SISTYVAPTTARDQIVFWQMGSLSGTTWSHVATVGTVASVGIVWAILIAGKLDTLALGER AAGHLGVNVNRLRLSSIALTALLTSAAVAYAGVITFVGLIVPHVLRLLIGPANKWLIPSA LLGGCLLVTLSDIAARTVVPYADLPIGIFTAIVGGPTFFILLRRGMGGEKALG >gi|302034501|gb|GL383250.1| GENE 253 247151 - 247930 203 259 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 1 221 278 509 563 82 28 1e-14 MIRARDVTFCYGERRILDGINLDVQAGEFVGLLGPNGAGKSTLLSVLCGDLEGWQGTVEL DGAPLQKLSRPQLALRRSVMPQFSEFPFSYLVHDIVMMGRSPHPRGPDDAVIVDRAMERT EVTDLVDREVTRLSGGERARVTLARVLAQQAPCVFLDEPTAALDICHQERTMAICHELAD AGCAVVAVMHDVALAAACCDRIALLSGGKILAVGPAVEVLTEDNLTTVYRWPIEVVALPG GELVILPRRARTASHDERR >gi|302034501|gb|GL383250.1| GENE 254 247933 - 249663 214 576 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 345 569 2 234 245 87 31 7e-16 MSGSVSVMSPQSGSRARRVAAVHIVEVVATCLFLVAVGQIIGGRFEDFAPAPGWYWAMGI GGVVAAVAAGAAVSMSGRHARAEEAALHAKVLDVLYRRSLTGPPAADEGERVITLATDNV ERVSEYRQVFLPDILAALATPVLVCLVILVGLDWFTGLVVLLACPLIPTLIGGFVKLFRK RSSDSRRERARLTARYLDALSNLVLIRMLGAGQRVEDDLRRRGETNRGTIMKLLAGNQIV IVVVDGLFSLLFIAMAAGLATTRWQGGDISATSAITIVLLSVLLLEPLHQVAAFFYIGMG GIASQKALRKWFDAAPSALMTSDSASSTPTPQRSAHVPVPEDGTIWLRNVSVGYGETEVL HGVSLDITHGGRTAIIGRSGAGKSTLLSVLSGTLPPKSGEVYVSGLDALTAAPGAIRSIS ASVNQRTWLFAGTVADNLAIANPNATREQMWDALRRAGVADEVEAMPKGLDSDVGEQGRL MSGGQAQRISLARAFLSGRNILLLDEPTSHVDVDSERRIIDAISQISDNTTVVMVTHRRR LLRLAHDVQRVSAGTLLPADDVDSIEDDRTETEDWA >gi|302034501|gb|GL383250.1| GENE 255 249660 - 251330 1069 556 aa, chain + ## HITS:1 COG:STM0956 KEGG:ns NR:ns ## COG: STM0956 COG4987 # Protein_GI_number: 16764317 # Func_class: C Energy production and conversion; O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components # Organism: Salmonella typhimurium LT2 # 30 552 24 552 573 193 28.0 7e-49 MTEPSTCQVMRWLTSITRPVHPPLYFSALMRVVHLLADIGLFAMAAGGMVAVVTAGWSAW AWLGWVVGLAAVQALAYYLEQFSGHYVAFKALEILRTYAFSQLWPKAPAVVSHSRTGDVL ASLTRDVERIEVVYTHTFAPVVAAIVAPLVAVVTGGVLYGWFVVAIPAVILVVLIVALLV IGTRASLDATHEMLGVRRELAAHFTDSVFGAAEIVGYGRQSDRIMQMARLDADIATGSAK ARRYAAMRRASCVAATMGIVAWVSVVGVSGGVDGIGVCVLVVAGLRVVEGLRGVEDAVGY LDHSLAAARRLWCLSYSPVEVVDGPEELCLDHAPALEWRGVSFCYRDADGVPLPAVLEDV TLGVPAGGHVVVTGASGSGKTTLVNLLLRHHDPDVGQVLVDGEPVSSFTLDSLRRCVGVV SQRVELLNASIADNLRLVVPAAGDGELWRVLGEVGLADEVRGMEAGLRTVVGSGGTRLSG GQAQRLTVARVILQRPRVLILDEFTASVDPDLAAEIRVNLARCLPGVTVVEISHECDCGG ETVVLDRGRVVKHLRR >gi|302034501|gb|GL383250.1| GENE 256 251359 - 252066 457 235 aa, chain + ## HITS:1 COG:Rv1631_1 KEGG:ns NR:ns ## COG: Rv1631_1 COG0237 # Protein_GI_number: 15608769 # Func_class: H Coenzyme transport and metabolism # Function: Dephospho-CoA kinase # Organism: Mycobacterium tuberculosis H37Rv # 27 220 1 191 230 143 48.0 2e-34 MRRTVVGDETTARDVARAGWVAGADGVVRVGLTGGIASGKSTVSQMLGERGAVIIDYDRL SRDVVAVGTQGLARVVEAFGREVLVADGSLNRSALGSIVFADLQARRRLEAIIHPLVEEA AHRVDEEARAADGLVVVVHDIPLLVETGRADEFDVVMVTDVDPAEQVRRVVERDGCSQAD AWARIRAQASREERLAVADVVIDTSVPLEDLPAQIDRVWSQIGGALRFDRRRGKM >gi|302034501|gb|GL383250.1| GENE 257 252139 - 252351 74 70 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNMCDNCYMRTRALEYGRWKIFACTNVHQSTYLDAKISPMSTREEYAIQRTLLCLTLWLR GNRQWFRGSM >gi|302034501|gb|GL383250.1| GENE 258 252584 - 254155 823 523 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3857 NR:ns ## KEGG: HMPREF0675_3857 # Name: not_defined # Def: HtaA # Organism: P.acnes_SK137 # Pathway: not_defined # 1 523 30 552 552 825 99.0 0 MVSIVSRATRVVRLAAVAAVAASVGMSTGPAWADQPDADQSQRQVALGAMQWTINSHFLN ALKMMMHGSWSTSSGASWNGKAFSFPVSKGSLSSTAQKADVKYSGSVHFTGVGGRMDLTL ADPEIVVNNGDDHVIMSVKSKTMVGQSVDYGRITFVDMTGSITQGQNDAAQVVGTNVKLN SQAVDAFAGFYQAGKPMDDIDSSLKLGPQSSRPEPTVTPKPSVTPKPSVKPKPTVAPKPS VKPKPRVSPKPSAKPKPTVAPKPDQSTIMAPQSDAATEAAAGEAPSAGAHKIIRKQVCTV VPGASRATSPTSTPAKVGKGSMNWGVSTSFVNALKGPMQGKWTMSGGASADGTRFNFPFS GGNYDRATKTGNLNFSGGVHFTGVHGLLDLSLSDPSLSLKNGKGVMKLTLNAGGMAPFKG RVDFANVSVVPSGSGFTATSVVLTGNGVQVWNGFYKKGHSMDNFSVSLGDKSDSASAAKQ NSASLVKKSAASPTKRECHDVLVDAKTGQIISGSSGSLPNTGV >gi|302034501|gb|GL383250.1| GENE 259 254615 - 255595 596 326 aa, chain - ## HITS:1 COG:MA0877_1 KEGG:ns NR:ns ## COG: MA0877_1 COG1239 # Protein_GI_number: 20089761 # Func_class: H Coenzyme transport and metabolism # Function: Mg-chelatase subunit ChlI # Organism: Methanosarcina acetivorans str.C2A # 6 315 9 322 384 333 53.0 2e-91 MEKPIYPFAAIVGQEEMKLSLILCAIYPRLSGVLIQGDKGTAKSTAVRGMAQIMPTISQV DDVYHLSADEQHIYGDPLGVPSCTNLQLRQVPVVELPVGVTEDRVAGTLDVETALVRGQQ RFQPGLLASAHRGILYVDEVNLLDDHIVDILLDSAAMGVNTVEREGMSVIHPSRFSLVGT MNPEEGQLRPQLLDRFGLCVTVQGETDPEVRMEIVQRRLSFEDDPDGFITEWSSHSRRLA ERIENAMTLVQSVEIPKNILSTAVQICLDSNIDGHRGDITIIHAARALAAWAGRDRIIQD DLEKVAPLVLNHRLQYASGVARAPRG >gi|302034501|gb|GL383250.1| GENE 260 255597 - 257318 219 573 aa, chain - ## HITS:1 COG:MA0877_2 KEGG:ns NR:ns ## COG: MA0877_2 COG1240 # Protein_GI_number: 20089761 # Func_class: H Coenzyme transport and metabolism # Function: Mg-chelatase subunit ChlD # Organism: Methanosarcina acetivorans str.C2A # 248 564 3 307 320 177 35.0 4e-44 MIGGVLITGPLGTAKSTCARSFVDLVPGIVVRDVTAGTTVDRLIGSMDLEAALASGRRRD HVGLLTEAQALCADDVNLFDDAVTAALIGRPEDLPLIATMAVGADTVHPQLLDRFGLCAV TVPCRNPKDRELIVNHRLTFDDGPDSFITTCTDATNEVVNRICAARNKLPDLEWTDAARN KFTELLTQAHAPGQRADLGLARSATAYAAWRGDNNVVVEDVTAVAELVLRHRRRNLSSSQ APSPDLNDAHSHSGPSSPHDGNEQLDEKGHDDSTAASPRVIAPEETFNVLTSTPAAYDRT QRRARGRRMVTRSADLRGHVISSQPTRQPVDLSLPATLRAAAPHQRARRASGEGRDGLSV VVKRSDWRRKVRESRTSTLVVFIVDASGSMGARGRMAASKAAVIGLLQDAYVKRDRVAVI TFSGNNAQVIVPATSSIERAQRLLTTMAVGGQTPLASGLSCAGRLIETELRRDSTLRPVA IVVTDGGGNVGLDGRVDRTATNQASDVAQTLSDDTRTSWIIVDTSVNRVHQRDCEALSGI LHAPRMTIDDLQSGVFIPFIRSTSRALSYSQRD >gi|302034501|gb|GL383250.1| GENE 261 257399 - 257932 469 177 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3860 NR:ns ## KEGG: HMPREF0675_3860 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 41 177 1 137 137 250 100.0 1e-65 MTKTLPYLAVTCALGLLLTGCSQSSQGSSRVTPSAAPDATMTPSGNVSKDLDVKTKVIKG AGLAITVDKGKQQVTFQTVDPKTKKPMKDWYMFNEKAQTLSWHKWVSAMGQAFDYTFSLT THKMTKIKDFHHNDITPQVKQMGFWKPAQDSTSDAEKRLEKYFKNRYGMTIKQAASA >gi|302034501|gb|GL383250.1| GENE 262 257968 - 261801 2187 1277 aa, chain - ## HITS:1 COG:MTH456 KEGG:ns NR:ns ## COG: MTH456 COG1429 # Protein_GI_number: 15678484 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin biosynthesis protein CobN and related Mg-chelatases # Organism: Methanothermobacter thermautotrophicus # 380 1268 2 859 859 526 36.0 1e-148 MKITFLTVFPDLVKHVSEAAKTIDPSHDLLELHFFNSTTRPTPEELEALTRAIHDSDIVV LDAMGGDPQWIRATRLTLDDFDGAVLSWGAEFIDKVRLGSFSMATARNAIEKTDSHADMK HMPPDMKSMLGNTGAQKSIKGILNSAKKMIPIITEMGSSTDSGGEISGINRVHATVKGMR TAPKFMADAKRFSALGKAFHSMREPQADFFLRHLLHFDGGHPEVVVPTPPEALAPASVGA PWPSRHFSTVEKYRQECDAPHGRPTVVLLYSGLTYPYDSNDVVRALMDSLRKDCWVVPIS IVAAGGESLEALRTLLSEAAPKLIISMQGFRIGGGPMGGDVDSSTAMLKSINAPIMHPLI LSRYTEKQWNESRHGLGQSEAMVMLMLPEMDGCLAEIPIAAMTEPAQNTTTGVVTSVLVP IPKQIERFARRVRGQLRLSTTPAPQKRIALIGYDYPAGEGNLLNGAFLDVSESMAAIMRE LSHRGYQTKTPSGQQLLNDLLAQAVNSPEYSQTVRPKTYLRADAEQDLPHPRAWQSMDET HPSPSDCPMTTPEGDFIIPAVDYGNVLVGIQPGRGSVKMATTDTHDTTRPPHPQYAGFYT WLSQIWKPDVIIHVGTHGTLEFLQGKENAVSAECFPDMLIGDIPHVYIYYCGNAAEGLIA RRRAHAVLVSYQPPVMQPTRLDGELAELDDLISEYRRSVTLMPQTSAELLEQVHGRATAL HLPTDLDELEVELARTKRSLVPMGLHVWGQAYTPQEARLMVRGMAEHGSFDGELAPALSP SEQAKVVGKVLGEVSDSSNETSLPEKSVEPKNPEDEALTQGVGYLASWARNLYARLQHND EIEGLFHALEGRHVDARLGGDPIRNPEVLPSGHSLYQFDSRRVPTPIAVRRGRDIANHVC SAYRASHDGADPTTIAVVLWGLETTRTQGETYAQILSLLGVRSLTPRRPNSPHWEIIPSN ELERPRVDVVVTICGFFRDLFSNLIDELDDILHAVAALDEPADINPLAARTRQQAQAMRQ SGEPEERIEALAHARIFGPPPGQYGSGLTDIVDSGQWQSPEDLATAFTAASGHVYTRYDH GSHTDGLYDSRLKDVDLVSQTRSSNEYEITDLDHYFEYLGGLGNSVRAAKGTSIPILVTD TTQDEVYTTSVGRAAAKGLRTRLLNKDWMEAMLAHGHRGVTEIEKRVTNLVGLAATTDQI DDWMFDEVCDTYIDDPEMVQRLSTLNPHSLASMAQRMVEAHDRSLWNASAEHLDKLHDLT FKLDSSLEAGTQEIDYP >gi|302034501|gb|GL383250.1| GENE 263 261798 - 262607 234 269 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 12 237 25 253 329 94 26 4e-18 MGNIMETPILSGSHLNVTLGNHKILNDVSVSFQAGVMHAILGPNGSGKTTLVRTLCGALS PESGSVKFDGTDLSTMSASCIARRIAIVWQSATAPSDLTVRHLVGYGRYAHTPWWQIRDT SADNHVEQAMELADVTCFADRRVTTLSGGERQKVWLAAALAQEPTVLILDEPTTYLDVTH QLRVLDLVRSLNQERGITVIAVMHDLTQAARYCDRCAILKNGQLTLEGPPDALSSGPIEE NFDIEAWITTDPQGKLPVIQPRRPLKEAR >gi|302034501|gb|GL383250.1| GENE 264 262609 - 263538 449 309 aa, chain - ## HITS:1 COG:lin2524 KEGG:ns NR:ns ## COG: lin2524 COG0609 # Protein_GI_number: 16801586 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Listeria innocua # 1 307 25 331 336 231 44.0 1e-60 MIVSVITGIGFGSIQLSPSDVVKGLFGPSDFQWHRVVWGVRFPRVVLAALVGMNLATSGV ILQAVMSNPLADPSIIGVSSGAGLLGIGTLLIFPERANLVPVMAFIGAMLAAMAIYALAW RGGVQPLRIILSGVAVSALCGAGISAVMVLMADNVQGALMFMNGSLAMRSWAEVSVIWPY TVVGIIAAVVLSRRLDIITLGDQVAQGMGMNVQANRLVLTAVAALLAASTVSAIGLLGFV GLIVPHIMRLIVGNRHVILVPACVLAGAALVMLSDTCSRVIFDPFEIPVGIMLTALGVPF FFFLLRKTL >gi|302034501|gb|GL383250.1| GENE 265 263649 - 264662 476 337 aa, chain - ## HITS:1 COG:lin2525 KEGG:ns NR:ns ## COG: lin2525 COG0614 # Protein_GI_number: 16801587 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Listeria innocua # 11 327 7 319 323 95 23.0 2e-19 MHTQKTAWKRISAAIAAILAMTMVGCGTSDPSKGGESRAEEAKTSFSVTDSFGHKVDFKT RPQRVCLLSATLLSIWYDLGGTAACTPSLTGNEKLQPAHAAAIKKVPKVGMIYAVNLERI LATNPDLVIAPGAVSQNVTDKLSSQGIPVLNIKTRSLDEVLQTYQTLGKVLGHTKEAKKR SSQISAQVKSTVNKMPADGKRVAILFATATSISLKLNNSIAGSMAKLLKLKNIASSAIPD DPNAETATLSVEKITQQQPDIIMVTSMVQNNALARQIVNRELTSNPSWQAVDAVRKKKII YLPQQYFLFNGGPNYPDSVAYMAASVHPEIFGKPIEP >gi|302034501|gb|GL383250.1| GENE 266 264580 - 264819 103 79 aa, chain + ## HITS:1 COG:no KEGG:PPA2406 NR:ns ## KEGG: PPA2406 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 79 1 79 79 147 100.0 2e-34 MPQPTIVMASIAAIAALMRFQAVFCVCNCSTPVIMCAVSLFWLLGPVEGVRVKGYRRKNS PHPDLFDGPVVDGMNDIPP >gi|302034501|gb|GL383250.1| GENE 267 265055 - 265405 226 116 aa, chain + ## HITS:1 COG:no KEGG:PPA0784 NR:ns ## KEGG: PPA0784 # Name: not_defined # Def: ABC-type transport system, fused ATPase and permease # Organism: P.acnes # Pathway: not_defined # 40 83 447 490 556 80 95.0 3e-14 MKEQALIGARGLVSPSLCIPVLQSVSCYRGAAVMPFSRRLWRVLGEVGLADEVRGMEAGL RTVVGSGGTRLSGGQAQRLTVARNLPTGVGRTWSRILRASLPVPWREAVGQLMVVQ >gi|302034501|gb|GL383250.1| GENE 268 265754 - 266062 198 102 aa, chain - ## HITS:1 COG:CAC0226 KEGG:ns NR:ns ## COG: CAC0226 COG1136 # Protein_GI_number: 15893518 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, ATPase component # Organism: Clostridium acetobutylicum # 16 102 3 95 256 73 37.0 1e-13 MTTMNGTATMNENSPVLRVENLSKTFGSRTLWKGHDFQASGGEIIALRGPSGCGKSILLS TIVLLIRPDSGHIVIDGTDILTIPRRRHKRVRRETIGYLFQD >gi|302034501|gb|GL383250.1| GENE 269 266076 - 266378 153 100 aa, chain - ## HITS:1 COG:no KEGG:PPA0798 NR:ns ## KEGG: PPA0798 # Name: not_defined # Def: putative permease # Organism: P.acnes # Pathway: not_defined # 1 100 70 169 169 172 100.0 3e-42 MYSTVHRQRSLVRKLHGWSGLYMFRQVVAWETGLWGTLAIVIAWRSVTSWQAGRTESIAE GRRPHDLLSWAYTAPWAWAGTAGVGIATLSILSYAGSIEH >gi|302034501|gb|GL383250.1| GENE 270 266608 - 267414 200 268 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3868 NR:ns ## KEGG: HMPREF0675_3868 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 268 1 268 268 495 99.0 1e-139 MISVPILGFYNGLAQWMRWFRWSVQIWILSVAVLLTVEIVTLAIAWSSAEILAQVKGRMT SLPVFSASYLLRFPVAMLAILLIVSVTSATRELWRYEDQQAQWATVDRHVGRVALRGIGS AVIDAASEKRMVDAVGAWLSDVDEHHRLIVANLSPVDVGLPAPIQLFIINDEYCQRHPVP ACASSPNVSTVTGTVPVSLSSVEPRIRHAIAQQLSAPAKAGKATIKWSRQEGSHDYFTYG PQSPEQGLSATMTDPVMIRVPLRTIVRR >gi|302034501|gb|GL383250.1| GENE 271 267545 - 267784 89 79 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|314925323|gb|EFS89154.1| ## NR: gi|314925323|gb|EFS89154.1| hypothetical protein HMPREF9606_01686 [Propionibacterium acnes HL036PA3] # 1 79 1 79 79 138 98.0 1e-31 MTRATNAPHHPAVRLDDVRIMAGNESQVHLALYRGAKPQCTHSGGECGGIGGVAVDEVLA AAIGGLILIHVGDMGDHLR >gi|302034501|gb|GL383250.1| GENE 272 268191 - 268535 251 114 aa, chain - ## HITS:1 COG:no KEGG:PPA0802 NR:ns ## KEGG: PPA0802 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 22 114 1 93 93 173 96.0 2e-42 MTLSLLLAMKRFSRRSYKEEIVSTVWRHFAAVPITGLLLASTATIAMADTVNPPEGGVWR YGRGYSDYFHGSKKHGSSVQGVNFVRSPCVKAGSWSYARTDAARFGNKAWYRTC >gi|302034501|gb|GL383250.1| GENE 273 268647 - 270752 1946 701 aa, chain + ## HITS:1 COG:MT1669 KEGG:ns NR:ns ## COG: MT1669 COG0556 # Protein_GI_number: 15841088 # Func_class: L Replication, recombination and repair # Function: Helicase subunit of the DNA excision repair complex # Organism: Mycobacterium tuberculosis CDC1551 # 2 696 36 733 739 918 70.0 0 MRPVTDITRRVAPFHVVSEFQPSGDQPQAIAELEKRVNSGEQDVVLLGATGTGKTATVAW LAERLQRPMLVMQPNKTLAAQFAQELRTFFPDNAVEYFVSYYDYYQPEAYIPQTDTYIEK DSSLNKEVERLRHSATNSLLTRRDVIVVSTVSAIYGLGTPQEYVDRMIPLEVGQEWDRDE LLRDLVTNQYVRNDISGERGTFRVRGDTLEIFPVYEENALRVEFFGDEIEALTTMHPLTG EIISEDEQVYVFPATHYVAGPERMERAIASIQQELEERLAVLERDGKLLEAQRLRMRTTY DIEMMQQVGACAGIENYSRHIDGRAPGSAPNCLLDYFPEDFVLVIDESHVTVPQIGGMYE GDMSRKRTLVEHGFRLPSAMDNRPLKFDEFTQRIGQTVYLSATPGSYETERAHGVVEQII RPTGLVDPEIIVKPTRGQIDDLMGEIRTRVDRGDRVLVTTLTKKMAEDLTDYLMEHGIRT RYLHSEIDTLKRIELLKELRMGEFDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSER SLIQTVGRAARNVNGQVIMYADQITDSMQVAIDETNRRRDIQMAYNKEHGIDPQPLRKKI GDITEMLAREGADTDELVEKFNYGKGHRGYNSMITDEQRAAQGRRLDVSKMAEEDLGKLI VDLTTEMRSAAGELKFEVAARLRDEIADLKKELRQMVEANR >gi|302034501|gb|GL383250.1| GENE 274 270946 - 271935 905 329 aa, chain + ## HITS:1 COG:Cgl1921 KEGG:ns NR:ns ## COG: Cgl1921 COG0861 # Protein_GI_number: 19553171 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane protein TerC, possibly involved in tellurium resistance # Organism: Corynebacterium glutamicum # 1 324 1 329 369 239 43.0 5e-63 MHVHAYVWIITILVMGALLFFDVLVLGRNPHIPSAKECATFVGVFVGLAVLFGLGVWILQ GHAAGGQFFAVWLTEYSLSIDNLFIFLILMEKFNVPRKLQQFALLVGIIVALVFRGVFIA LGQAILEAWAWVFFIFGAFLLYSAIDQVREYRHRDDDDDEDPGEDGRFMAWFRRTVPATG DYRGTKFFVRENGKTLATSMFMVCVALGATDLLFALDSIPASYGLTSEGYLILTANVFAL MGLRQLYFLIGSLLERLVYLSLGLAVILGFIALKLIGHAMHHYGLDQAWFGFSSEVSIGV SLGVIAVTLALTTVASLIKSRKDDATADV >gi|302034501|gb|GL383250.1| GENE 275 271944 - 272600 441 218 aa, chain - ## HITS:1 COG:ML1391 KEGG:ns NR:ns ## COG: ML1391 COG0491 # Protein_GI_number: 15827726 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Mycobacterium leprae # 5 218 14 232 232 144 41.0 9e-35 MPLYHVDPGSEAALIKVNDDVDLIKISVGTMDNNAYLIHPGAGPAILVDAAAEPGRLKAL IGDDEVGAVITTHRHQDHTGALAEIVTMTGAQPWCGEPDAEAIEATTGVTCRTMWDGDLF RLGDVELDVIGLVGHTRGSIALRLHGNPSDHVLTGDSLFPGRLGKTSGSREFESLYTDVC MKIFAPASDTTVIHPGHGDATTVGEERPNLPLWRARGW >gi|302034501|gb|GL383250.1| GENE 276 272646 - 273389 489 247 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3873 NR:ns ## KEGG: HMPREF0675_3873 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 247 64 310 310 471 100.0 1e-131 MSAAQRPPGLCPSAPLHVIRAAKREATQRLLGATMGLSDDEWQAPSRLAGWTRAHIATHI ARNAEAFEAVTKAVITNQKVPHLYPSDELRDRDIERGSERAGLQLQIDLDTTAGSLNTTF DALDDMEPGTAVWLTNDIRVDVTDLPALRLAEIALHHVDLDLGMTVDDLPDVSARTLLEW VCFRLRDRPEVPAMRIVSDSGLTDRIGGVGFATTVHGPDGALAGWLSGRGGTERLAGADQ LAVPMLI >gi|302034501|gb|GL383250.1| GENE 277 273540 - 276500 1824 986 aa, chain + ## HITS:1 COG:Rv1638 KEGG:ns NR:ns ## COG: Rv1638 COG0178 # Protein_GI_number: 15608776 # Func_class: L Replication, recombination and repair # Function: Excinuclease ATPase subunit # Organism: Mycobacterium tuberculosis H37Rv # 1 946 1 955 972 1352 70.0 0 MSDHIIVRGAREHNLRNVNLDLPRDAMIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSS YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEIHDYLRLLWARVGKPH CPVCGELISRQTPQQIVDRLMALDEGTKFQVLAPVIRGRKGEYVELFRQLTTDGFTRVRV DGDVHRLGQVPPLDKKRKHDIDVVVDRIAVKPSAKQRLTESVETALGLAHGIVGVDFVDR DLSDPHRERRFSETMACPNQHDIDIEELEPRQFSFNGPWGACPTCSGLGATLEVDPELVV PDSGLSLLEGAIAPWSGPRVANHYQHVFAGLAENHGFDATLPWSELPVKARKLVLHGDGD PVMISYRNRFGRVRTYSQNYEGVLHYVRRRYDEAETDSARSRWGQYLREVPCRDCHGKRL KPTSLAVTVGGRNIAEVSDMSIGEASEFLNALTLTEREATIAGRVIKEVRARLRFLVDVG LDYLTLSRSAGSLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRRLIDTLVRL RDLGNTLIVVEHDEDTIRMADWVVDVGPGAGEHGGEVVVSGTVDELLASERSVTGAYLSG KRSIPLPATRRPCTGRELVVRGARENNLKGMNVTFPLGQLVVVTGVSGSGKSTLVNQILY TSLAHRIHGARTVPGKHETITGVEEIDKVIHVDQSPIGRTPRSNPATYTGVFDKIRALFA QTPEAKMRGYQPGRFSFNIKGGRCENCQGDGTIKIEMNFLPDVYVPCEVCHGARYNRETL EVHYKGKTIAEVLDMPIEEACTFFEPISSIHRHFQTLVEVGLGYVRLGQPATTLSGGEAQ RIKLASELQKRSTGRTLYVLDEPTTGLHFEDIRKLLLVLQRLVDQGNSVFVIEHNLDVIK TADWIIDMGPEGGNGGGTVVAEGTPEQVAAVEGSYTGQYLSEILAGHEVAVGDEPALVEA PADAGKRKTTARRKAKKTTSPRKKSR >gi|302034501|gb|GL383250.1| GENE 278 276515 - 276922 388 135 aa, chain - ## HITS:1 COG:Cgl2981 KEGG:ns NR:ns ## COG: Cgl2981 COG2146 # Protein_GI_number: 19554231 # Func_class: P Inorganic ion transport and metabolism; R General function prediction only # Function: Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases # Organism: Corynebacterium glutamicum # 43 133 26 114 116 65 39.0 2e-11 MSPTRREVLRTVGSVTALAATSAVAGCNTFQNSNDVHTGPATVKAADVPVGGGVVIDGTN FVVTQPTKGTFKGFVRVCPHAGCQVDEVHDGAILCPCHGSKFAITDGHVTQGPATSGLGK ATVTQKGETLTISGS >gi|302034501|gb|GL383250.1| GENE 279 276938 - 277684 543 248 aa, chain - ## HITS:1 COG:DR2564 KEGG:ns NR:ns ## COG: DR2564 COG0406 # Protein_GI_number: 15807548 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Deinococcus radiodurans # 1 228 40 263 270 73 31.0 4e-13 MHLLLIRHGQSENNAFAAQSVETYQQGRKPDPELTELGRRQAQALGKWIGSVSPRPTKLY ASPMMRTIQTADPVAEALDLPIIINDLIFERPGPVQIVDGVETGHPGSPRSALSAITDRA VFPESITEEGWREARIETAAEAADRAGRIAKWIRDTHNDDECIAIVAHGAIGSMMLLHLI APQLAAGLRNHSIGSEPHWIGLQNTATSMIELHPDGYEVHWINRVDHLIEAGMVHGAVAA STGNPGTR >gi|302034501|gb|GL383250.1| GENE 280 277861 - 279510 501 549 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3876 NR:ns ## KEGG: HMPREF0675_3876 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 549 1 549 549 1114 99.0 0 MTIEVVDDSARNVSKTWRKVTFSVVVPYRPEWVTEPIENMASKTVGPAEVLDSLVSSSED ILQSSRDQAYEPHKYYFSRRIRDAVRMYRHAVYDATREDAIRAKVAERRKSHKGSILNIP EGLSYLGAERREYEDSLGAVAGGEAFHYAVLHFRLDDVTDAAVETAAAWLKRPGGDGARY LSGLLSDIGLGRCLYSWGGFSQGNAGCGRGKASSRDRGCGAGGAPFLNCNRIFVMTFAEV DPQDLRHPSYFGHHKAWTPAQAWLYHLATGGIGIYRGVPPSDTSDAANDGMFCLDATWVR IEEAGMAVMTQPVLLEESNRKHAGALCLLCHSRMLDIVILCLRQRTYLDRNAESEARVLV GKGHWGDEELDRLLDRERSVAAFLNGLWFTEVSGRREATLVLNEFQKVLGTPVLLTELRD EQESLVRVVEVHRRIDNVAMDKARKEQERRREQLEKAAEKRLEIIVLVLTVISTMLALLA LVSDPNLGLFAVGFILTGIVALIGGIRVKRLLRGDCEGQERQPCRFVTRRHHRETNVSPC SLAREQWPG >gi|302034501|gb|GL383250.1| GENE 281 279383 - 279619 70 78 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPLNRPADDHRHKADRAGRSRQTLLDALATHDHTKALTRATVHVPGSRAIHSSLGDVVAS QTCTVVFLVLRNPPSINV >gi|302034501|gb|GL383250.1| GENE 282 279703 - 281721 1688 672 aa, chain + ## HITS:1 COG:ML0562 KEGG:ns NR:ns ## COG: ML0562 COG0322 # Protein_GI_number: 15827213 # Func_class: L Replication, recombination and repair # Function: Nuclease subunit of the excinuclease complex # Organism: Mycobacterium leprae # 1 649 1 641 647 716 57.0 0 MADPSSYRPAPGTIPTQPGVYRFSDAHGQVIYVGKAKNLRNRLNSYFQDISALHPRTQRM VTTAAHVQWTVVQNEVESLQLEYTWIKEFDPRFNVMYRDDKSYPWLCFTWTDEYPRVFVG RGAHHKGWRYYGPFGQAWAIRDTVETLLRVFPMRSCSTGVFNRAKNQGRPCLLGYIGKCS APCVERITSQAHREIADEFCDFMAGRTTKIVKRLESQMAEASENLEFERAAVIRDSLGAL SKTLERNAVVLGDGTDADVISMALDPLEVGVKIFHVRGGRIRGERGWVADRADDADEAEL METFLTQLYGVNASDGQVRDDGHGNAVPPLVIVSAEPTNPDVMSTILSSERGSHVEIRVP RRGDKATLMDTVTRNAQETLAQHKLKRASDLATRTRALEEIQESLGLDRAPLRIESYDIS HIQGTNVVGSMVVFEDGMPRKSEYRRFSIKGFEGSDDFAAMHEVLSRRLRRLIEDRDAMA AAQTPDGDVGSLIDPTTGSPRKFAYAPHLIVVDGGAPQVHAAQQVLEEFGLEDEIALCGL AKRLEEVWLPDEEWPVILPRTSEGLYLLQRLRDEAHRFAITFHRSKRSKAMVESVLDGVS GLGETRRKALVSHFGSVRSLRKATVDDIVEVPGFGPKLAGEVVAALSQDKPAEAINTATG EVVDANGPDAGR >gi|302034501|gb|GL383250.1| GENE 283 281738 - 282613 618 291 aa, chain + ## HITS:1 COG:MT1464 KEGG:ns NR:ns ## COG: MT1464 COG1660 # Protein_GI_number: 15840878 # Func_class: R General function prediction only # Function: Predicted P-loop-containing kinase # Organism: Mycobacterium tuberculosis CDC1551 # 12 291 19 301 301 256 50.0 3e-68 MSTEQTTKTPRVVIITGISGAGRRTAAHAVEDLGWYVVDNLPPAMLGALVDEIAANNIDR LAVVLDVRSRIMFDALGVAVNALDERGIDPAIVFLEASDETIVRRQESSRRPLPLQQGGH LLDAVALERRMLSDLRAEADLVIDTTSITARQLAQRIDHAFAEGIDEGLAFQVMSFGFKR GVPIDADLVFDVRFLPNPYWVPELRPKTGLSSDVASYVMAQAGATEFIDRVEQLLGGMAP GYLREGKKQVTVAVGCTGGKHRSTAISEELSTRLAARGHRTAVLHRDLGKE >gi|302034501|gb|GL383250.1| GENE 284 282616 - 283578 649 320 aa, chain + ## HITS:1 COG:ML0564 KEGG:ns NR:ns ## COG: ML0564 COG0391 # Protein_GI_number: 15827215 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mycobacterium leprae # 4 310 3 311 359 256 49.0 5e-68 MVSTPSKLPVVTAFGGGHGLAVSLRALRRLTDQLTAVVTVADNGGSSGRLRDEFDILPPG DLRRALAALCADDRLGRTWAEVLQARFNGTGELAGHAIGNLLIAGLWQELGDPVSGLDMV GQLLDVRGRVLPMSLTPLDISAQVVGLDPNRPDEEYTLTGQATIAKTRAEVLKVGLEPSE PDACPQVLEAIHASDNLVLGPGSWFTSVMPHLLVPQIVDAILESKARKILTLNVSGADET DGFSPARHLEVIAEHEPRMRFDVVLVDRGFAGQDPHLESFARNLGAEIVVDDLAMRDGSA RHDPLRLASAYANIMGVQPR >gi|302034501|gb|GL383250.1| GENE 285 283635 - 284624 488 329 aa, chain + ## HITS:1 COG:MT1466 KEGG:ns NR:ns ## COG: MT1466 COG1481 # Protein_GI_number: 15840880 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mycobacterium tuberculosis CDC1551 # 1 327 1 326 327 301 60.0 1e-81 MALTLQVKNELATVPVQKLCCRRSEIAATLRFAGGIHLVQHRHLTIEAEVDTGGAARRLR QSIQEVFGFDTDLVVVNGAGLHSNTRYLIRMVRGGADLARLTGLLDRRGRPVRGLPVPIV GGGRCCQAAAWRGAFLARGSLTEPGRSMAMEITAPGEEAAMALVGAARRLDITAKQRESR HVDRVTIRDGDAISAMLTRMGAHESVLAWEDRRLRREVRASANRLANFDDANLRRSARAA VTASARVERALEILGDSVPDHLRAAGRLRLEHRNASLEELGKVHEPPLTKDAIAGRIRRL LALADKTARSNGEPTTLESLPVEMRDDRG >gi|302034501|gb|GL383250.1| GENE 286 284858 - 285865 1126 335 aa, chain + ## HITS:1 COG:Cgl1550 KEGG:ns NR:ns ## COG: Cgl1550 COG0057 # Protein_GI_number: 19552800 # Func_class: G Carbohydrate transport and metabolism # Function: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase # Organism: Corynebacterium glutamicum # 1 334 1 334 334 442 70.0 1e-124 MTVKVGINGFGRIGRNFFRALAEQGADLEVVAVNDLTDTKTLAHLLKYDSIMGRFSGEVS YDDDSITVDGKTIKVLAERNPADLPWKELGAEIVVESTGLFTDGEKAKAHFEAGAKKVII SAPGKNVDGTFVMGVNDGDYDNAKHNIISNASCTTNCLAPLAKVLNDAFGIERGIMTTVH AYTGDQRLQDAPHKDLRRARAAALNMIPTKTGAAQAVALVLPELKGKFDGLAVRVPTPTG SLTDLTFQTSKETTVEEVQAAVKKAAEGPLKGILAYTEDPIVSKDIEGDPHSSIFDATET KAIGNLVKVLSWYDNEWGYSNRLVDLTKLVASKLA Prediction of potential genes in microbial genomes Time: Thu Jul 21 05:27:47 2011 Seq name: gi|302034500|gb|GL383251.1| Propionibacterium acnes HL025PA2 genomic scaffold Scfld4, whole genome shotgun sequence Length of sequence - 5622 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - 5S_RRNA 65 - 186 100.0 # AE017283 [D:611077..611198] # 5SrRNA # Propionibacterium acnes KPA171202 # Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Propionibacterineae; Propionibacteriaceae; Propionibacterium. - LSU_RRNA 304 - 3195 99.0 # AE017283 [D:608072..610963] # 23SrRNA # Propionibacterium acnes KPA171202 # Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Propionibacterineae; Propionibacteriaceae; Propionibacterium. - SSU_RRNA 3588 - 5104 99.0 # AY354921 [R:1..1525] # 16S ribosomal RNA # Propionibacterium sp. LG # Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Propionibacterineae; Propionibacteriaceae; Propionibacterium. - Term 5242 - 5286 3.3 1 1 Tu 1 . - CDS 5298 - 5585 114 ## Predicted protein(s) >gi|302034500|gb|GL383251.1| GENE 1 5298 - 5585 114 95 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSGRWGLRVWFLVVAVFGCFLVGFDGGGVFGYGFPGCCFGGGVVGWFCWLVLGSWFCGFG VGVVGLVGSPCDGFCMVCVGIVVVGVMFENSTVCL Prediction of potential genes in microbial genomes Time: Thu Jul 21 05:28:15 2011 Seq name: gi|302034499|gb|GL383252.1| Propionibacterium acnes HL025PA2 genomic scaffold Scfld5, whole genome shotgun sequence Length of sequence - 61472 bp Number of predicted genes - 65, with homology - 63 Number of transcription units - 35, operones - 18 average op.length - 2.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 59 - 2305 1692 ## COG0205 6-phosphofructokinase 2 2 Op 1 . - CDS 2484 - 4553 1283 ## COG0171 NAD synthase 3 2 Op 2 . - CDS 4525 - 4749 157 ## gi|313765124|gb|EFS36488.1| hypothetical protein HMPREF9567_00763 4 3 Op 1 . + CDS 4748 - 4966 104 ## 5 3 Op 2 . + CDS 4882 - 5676 552 ## HMPREF0675_5340 ErfK/YbiS/YcfS/YnhG 6 3 Op 3 . + CDS 5673 - 6209 263 ## HMPREF0675_5339 hypothetical protein 7 3 Op 4 . + CDS 6239 - 6637 333 ## PPA2263 hypothetical protein 8 4 Op 1 . - CDS 6650 - 7138 414 ## COG2606 Uncharacterized conserved protein 9 4 Op 2 . - CDS 7138 - 8010 647 ## COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase + Prom 8092 - 8151 2.3 10 5 Op 1 2/0.000 + CDS 8234 - 8794 388 ## COG1309 Transcriptional regulator 11 5 Op 2 . + CDS 8794 - 10140 918 ## COG0534 Na+-driven multidrug efflux pump 12 6 Op 1 . - CDS 10200 - 12806 2061 ## HMPREF0675_5333 RecF/RecN/SMC N-terminal domain protein 13 6 Op 2 . - CDS 12803 - 13948 601 ## COG0420 DNA repair exonuclease - Prom 13987 - 14046 1.8 14 7 Tu 1 . + CDS 14321 - 14812 289 ## COG1846 Transcriptional regulators 15 8 Tu 1 . + CDS 14928 - 16334 1130 ## COG1113 Gamma-aminobutyrate permease and related permeases + Term 16380 - 16408 -1.0 16 9 Op 1 1/0.167 - CDS 16337 - 18064 1247 ## COG0038 Chloride channel protein EriC 17 9 Op 2 . - CDS 18061 - 18567 358 ## COG1846 Transcriptional regulators 18 10 Tu 1 . + CDS 18355 - 19608 920 ## COG1052 Lactate dehydrogenase and related dehydrogenases + Term 19633 - 19698 0.6 + Prom 19730 - 19789 3.9 19 11 Op 1 9/0.000 + CDS 20025 - 21659 1344 ## COG0578 Glycerol-3-phosphate dehydrogenase 20 11 Op 2 8/0.000 + CDS 21656 - 22999 1162 ## COG3075 Anaerobic glycerol-3-phosphate dehydrogenase 21 11 Op 3 . + CDS 23002 - 24252 1199 ## COG0247 Fe-S oxidoreductase + Term 24329 - 24373 8.7 22 12 Op 1 . - CDS 24576 - 25151 251 ## COG2094 3-methyladenine DNA glycosylase 23 12 Op 2 . - CDS 25148 - 25465 226 ## HMPREF0675_5321 hypothetical protein 24 13 Op 1 . - CDS 25612 - 26613 734 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases 25 13 Op 2 . - CDS 26664 - 28010 1170 ## COG0305 Replicative DNA helicase 26 14 Tu 1 . - CDS 28194 - 28541 174 ## gi|313803247|gb|EFS44443.1| hypothetical protein HMPREF9576_00372 27 15 Op 1 . + CDS 28482 - 28880 367 ## COG1937 Uncharacterized protein conserved in bacteria 28 15 Op 2 . + CDS 28904 - 29296 283 ## HMPREF0675_5317 heavy metal-associated domain protein - Term 28827 - 28869 -0.4 29 16 Tu 1 . - CDS 29111 - 29449 192 ## 30 17 Tu 1 . + CDS 29485 - 31743 1608 ## COG2217 Cation transport ATPase 31 18 Tu 1 . + CDS 32023 - 33216 965 ## COG3583 Uncharacterized protein conserved in bacteria 32 19 Op 1 . - CDS 33287 - 33769 425 ## HMPREF0675_5314 bacterial transcription activator, effector binding domain protein 33 19 Op 2 . - CDS 33769 - 34620 604 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase 34 19 Op 3 . - CDS 34622 - 35431 197 ## PROTEIN SUPPORTED gi|163797523|ref|ZP_02191474.1| 50S ribosomal protein L9 35 20 Op 1 . + CDS 35543 - 36340 619 ## COG0648 Endonuclease IV 36 20 Op 2 . + CDS 36414 - 38348 1358 ## COG1022 Long-chain acyl-CoA synthetases (AMP-forming) + Term 38356 - 38390 2.1 37 21 Op 1 7/0.000 + CDS 38730 - 40217 1409 ## COG1299 Phosphotransferase system, fructose-specific IIC component 38 21 Op 2 . + CDS 40241 - 40702 524 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) + Term 40705 - 40759 4.3 39 22 Tu 1 . + CDS 40880 - 41263 305 ## HMPREF0675_5306 hypothetical protein + Term 41397 - 41433 -0.3 + Prom 41611 - 41670 2.1 40 23 Op 1 24/0.000 + CDS 41785 - 42075 487 ## PROTEIN SUPPORTED gi|50843665|ref|YP_056892.1| 30S ribosomal protein S6 41 23 Op 2 21/0.000 + CDS 42203 - 42757 566 ## COG0629 Single-stranded DNA-binding protein + Term 42844 - 42869 -0.5 42 23 Op 3 27/0.000 + CDS 42884 - 43123 384 ## PROTEIN SUPPORTED gi|50843663|ref|YP_056890.1| 30S ribosomal protein S18 43 23 Op 4 . + CDS 43137 - 43586 747 ## PROTEIN SUPPORTED gi|50843662|ref|YP_056889.1| 50S ribosomal protein L9 + Term 43609 - 43648 10.5 - Term 43597 - 43636 7.1 44 24 Tu 1 . - CDS 43798 - 44043 169 ## HMPREF0675_5300 hypothetical protein 45 25 Tu 1 . + CDS 43909 - 44547 282 ## PPA2226 hypothetical protein 46 26 Tu 1 . - CDS 44636 - 44866 148 ## HMPREF0675_5299 hypothetical protein 47 27 Tu 1 . + CDS 44878 - 45396 613 ## COG1528 Ferritin-like protein 48 28 Tu 1 . + CDS 45608 - 46462 832 ## COG1968 Uncharacterized bacitracin resistance protein + Term 46525 - 46567 -0.5 49 29 Tu 1 . - CDS 46515 - 46889 185 ## HMPREF0675_5296 siderophore-interacting protein 50 30 Tu 1 . - CDS 47032 - 47292 125 ## HMPREF0675_5294 hypothetical protein 51 31 Tu 1 . + CDS 47733 - 48464 275 ## COG2360 Leu/Phe-tRNA-protein transferase + Prom 48618 - 48677 1.9 52 32 Op 1 . + CDS 48711 - 48908 100 ## gi|313765175|gb|EFS36539.1| hypothetical protein HMPREF9567_00814 53 32 Op 2 . + CDS 48938 - 49243 119 ## gi|332676605|gb|AEE73421.1| hypothetical protein PAZ_c23100 54 32 Op 3 . + CDS 49179 - 49997 1035 ## COG3861 Uncharacterized protein conserved in bacteria + Term 50014 - 50054 3.3 55 33 Op 1 . + CDS 50084 - 51358 1276 ## COG0172 Seryl-tRNA synthetase 56 33 Op 2 . + CDS 51355 - 52143 442 ## COG1085 Galactose-1-phosphate uridylyltransferase 57 33 Op 3 . + CDS 52165 - 52680 237 ## COG1085 Galactose-1-phosphate uridylyltransferase 58 34 Op 1 2/0.000 + CDS 52800 - 53558 127 ## COG1414 Transcriptional regulator + Term 53601 - 53640 0.6 + Prom 53569 - 53628 3.6 59 34 Op 2 8/0.000 + CDS 53784 - 54932 483 ## COG1960 Acyl-CoA dehydrogenases 60 34 Op 3 . + CDS 54970 - 56136 413 ## COG1804 Predicted acyl-CoA transferases/carnitine dehydratase 61 35 Op 1 29/0.000 + CDS 56245 - 57006 393 ## COG2086 Electron transfer flavoprotein, beta subunit 62 35 Op 2 9/0.000 + CDS 57039 - 57917 432 ## COG2025 Electron transfer flavoprotein, alpha subunit 63 35 Op 3 12/0.000 + CDS 57914 - 59284 175 ## COG0644 Dehydrogenases (flavoproteins) 64 35 Op 4 . + CDS 59284 - 59586 95 ## COG2440 Ferredoxin-like protein 65 35 Op 5 . + CDS 59643 - 61127 1000 ## COG1457 Purine-cytosine permease and related proteins + Term 61198 - 61244 15.1 Predicted protein(s) >gi|302034499|gb|GL383252.1| GENE 1 59 - 2305 1692 748 aa, chain - ## HITS:1 COG:SPBC16H5.02 KEGG:ns NR:ns ## COG: SPBC16H5.02 COG0205 # Protein_GI_number: 19112738 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphofructokinase # Organism: Schizosaccharomyces pombe # 4 744 186 936 942 625 45.0 1e-179 MRLTPTLPDGHGLRIGILTSGGDAQGMNAAVRAVVRSALSVGAEVYAIYEGYQGMIDGGD GIRRFGWDDVGSILNRGGTVIGTFRCKGMRERPGRLKAVRNLLEHGIDRLVVIGGDGSLT GLDVLRTEWTDLVAELVDTGQVSAEVAREHPALMIAGLVGSIDNDLVGSDMTIGADTALH RIVDAIDDLASTAASHQRSFVVEVMGRHCGYLALMAAVAGGADYVLIPERPPEDGWEDRM CAELKRGRQAGRRDSIVVVAEGATDRSGNRISSEYVRQVLEDKLGEDARVTILGHVQRGG RPSAYDRWASTWLGYHAVHEVLSTTPEAEGRVIGTGSNRIHRLPLVKAVADTKSVPGLIT EGRYNEAMRMRGRSFVEMDAIFTELSEPARTTSDTAGDADRKRVAIMHAGGPAPGMNTAA RAAVRLAISRGHTVVGIHNGFIGLATGDMSELAWSDVEGWAGEGGAELGTRREIPSTRDL YAVSRALEDHHIDALLVIGGYSAYEGIYTMMTERDRYPAFRIPTVCIPASIDNNLPGSEL SIGTDTALNVIVEAMDKIKESGIASRRCFVVETMGRDCGYLALMSGIAAGAERIYTNEDG ISLDDLANDVHWLRESFAHGRRLFLAVRNENASHNYTTDFIARLLEEESHGMYDVRQVVL GHMQQGGSPSPFDRLLANRLGYRALNLIDDELAAHQDGSWFIGVNESGMRPCSMDTMPSL IDAAHRRPREQWWLQLRTIARMVSDEVR >gi|302034499|gb|GL383252.1| GENE 2 2484 - 4553 1283 689 aa, chain - ## HITS:1 COG:ML1463_2 KEGG:ns NR:ns ## COG: ML1463_2 COG0171 # Protein_GI_number: 15827765 # Func_class: H Coenzyme transport and metabolism # Function: NAD synthase # Organism: Mycobacterium leprae # 332 687 2 359 359 500 65.0 1e-141 MKGNFHSTYDQGFARVAACTTTVHIGDPASNVAGILDTCRELSSRSVAIAVFPELCLTGY AIDDLLLQDVVLDAVLDAIETVRQASRSLFPVIIVGAPLQRGNRLYNCAVVIHRGQVLGV VPKSHLPNYREFYEKRHFAVGAGTTGMIDLSGRQKSHAASTEIPFGPDQLFRATDLPDLT FHVEVCEDLWVPVAPSSQAALAGAVVEVNLSGSPITVGKSRQRHELCKVTSSRNLQAYVY AAAGPGESSTDLSWDGQTMIYENGSLLAATDRFSPEPGYCLADIDLDLLRQERLRQGSFD DNALAQPAQAPWRTTIFTLDPPHDDIGLERPVNRFPFVPNDPDQLAQDCYEAYNIQVYGL RRRLESMGSPKIVIGVSGGLDSTHALLVAAKAMDQMGRPRTDILAFTMPGFATTDHTKNN ALDMCRALGIPCEVLDIRPAATQMLKGMSHPAGDGAEVYDVTFENVQAGLRYDYLFRIAN QRGGIVLGTGDLSELALGWCTFGVGDQMSHYGVNTGVPKTLIQHLIRWCISSGQFNEATN VVLESVLGTEISPELVPARPGEKIQSTQAKIGPYELQDFTLYHLLRHGMRPSRIIFLSHH AWRDASVGSWPPGFRDEDRHSYDLSAIKDWTRLFLRRFVGNQFKRSTLPNGPKVVAGGSL SPRGDWRMPSDAVVRAWLDDLETVPDERF >gi|302034499|gb|GL383252.1| GENE 3 4525 - 4749 157 74 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313765124|gb|EFS36488.1| ## NR: gi|313765124|gb|EFS36488.1| hypothetical protein HMPREF9567_00763 [Propionibacterium acnes HL013PA1] hypothetical protein HMPREF9574_02160 [Propionibacterium acnes HL074PA1] hypothetical protein HMPREF9585_00161 [Propionibacterium acnes HL083PA1] hypothetical protein HMPREF9593_00736 [Propionibacterium acnes HL046PA2] hypothetical protein HMPREF9612_00571 [Propionibacterium acnes HL063PA2] hypothetical protein HMPREF9616_00075 [Propionibacterium acnes HL007PA1] hypothetical protein HMPREF9609_00679 [Propionibacterium acnes HL027PA1] hypothetical protein HMPREF9614_01261 [Propionibacterium acnes HL002PA2] hypothetical protein HMPREF9618_00965 [Propionibacterium acnes HL082PA1] hypothetical protein HMPREF9564_00065 [Propionibacterium acnes HL053PA1] hypothetical protein HMPREF9594_00072 [Propionibacterium acnes HL005PA1] hypothetical protein HMPREF9595_02523 [Propionibacterium acnes HL005PA2] hypothetical protein HMPREF9583_00170 [Propionibacterium acnes HL038PA1] hypothetical protein HMPREF9602_01425 [Propionibacterium acnes HL030PA2] ABC-type Fe3+-hydroxamate transport system,substrate-binding protein [Propionibacterium acnes HL097PA1] hypothetical protein HMPREF9570_00305 [Propionibacterium acnes HL043PA1] hypothetical protein HMPREF9571_00782 [Propionibacterium acnes HL043PA2] hypothetical protein HMPREF9568_00106 [Propionibacterium acnes HL013PA2] hypothetical protein HMPREF9586_00591 [Propionibacterium acnes HL083PA2] hypothetical protein HMPREF9584_00735 [Propionibacterium acnes HL092PA1] hypothetical protein HMPREF9588_00388 [Propionibacterium acnes HL025PA2] # 1 74 1 74 74 139 100.0 7e-32 MPGALVIGESLIDVVNDGAQGVSILGVPDECRDYRLPHRREPTAHRRIRVTEDSSPPRQC LRDWHHEGELPLDL >gi|302034499|gb|GL383252.1| GENE 4 4748 - 4966 104 72 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVLSSLSAPTRLSRGMSRRALRGVSQFCYRRCIRTVTVGPLNLTRCMPPDVPRTRNRASA QARGVAAVFLLP >gi|302034499|gb|GL383252.1| GENE 5 4882 - 5676 552 264 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5340 NR:ns ## KEGG: HMPREF0675_5340 # Name: not_defined # Def: ErfK/YbiS/YcfS/YnhG # Organism: P.acnes_SK137 # Pathway: not_defined # 1 264 1 264 264 454 99.0 1e-126 MHAPGRTSNPEPRVGSGPWRGGGFLVALVTMVCLVAGCGSSMPAASEPCIDFVPGAGDMR SRQQYPVTCPTASPKSAAKAAHKQPDPDGPSSNEGVNDPEDSTGPKADDSAPVTPTPTPP AASLTVGAKSSAGPGSYVLWIKAENRVYLVAHGLVKRVMLTTAEPWKTPVGNYKIQYKMR HAAFTEDGIRWYIPNFLSFYQRPGATGTIGFHQIPWDEKTKKPAQPVYTLGLPGYSSHGC ARLAPKDSEALYRFAHEGTKVKVR >gi|302034499|gb|GL383252.1| GENE 6 5673 - 6209 263 178 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5339 NR:ns ## KEGG: HMPREF0675_5339 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 178 1 178 178 286 100.0 3e-76 MSRRRSEENIIDVRARLGHNVDQRNSDILGATTESARVGRSAGVFTTAMAITGLVWGLTL AIWATSPGADGTRAGMPVQGWFGCLLIGLLYAMGVTVILIIPVVLMAALLGGRLVRRRSQ RIAGGVVGAVTVLVGAAGLYALILDLSAVVEVSWPAVVTASALGCWWGPWVMVGRSSR >gi|302034499|gb|GL383252.1| GENE 7 6239 - 6637 333 132 aa, chain + ## HITS:1 COG:no KEGG:PPA2263 NR:ns ## KEGG: PPA2263 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 132 1 132 132 162 99.0 5e-39 MTQQHTSTIPSAPKALTISAWVAVGAVIVQAVLACFMLSGVHGLGDVHMGFGIVTLLAAI VAAVLAVMWKRRGGSSAVVGHAVGMAVLILVQYVLGELSSGGAIKWIHVVLGVVIVIGLL VLPQSIGKNSSK >gi|302034499|gb|GL383252.1| GENE 8 6650 - 7138 414 162 aa, chain - ## HITS:1 COG:HI1434 KEGG:ns NR:ns ## COG: HI1434 COG2606 # Protein_GI_number: 16273339 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Haemophilus influenzae # 8 155 2 150 158 148 53.0 4e-36 MPASDSASAATKALAKAKIPHVLHSYDHDPSNHHFGDEGAAKLGFDPSIMLKTLVVELVP SGKLAVAVVPVSRQLDLKAFASAVGAKKVAMADPAAAERATGYIVGGISPLGQKKRLPIC IDESVLGQPRVLVSGGRRGLSVELSPSDLVTVTGAVTAKISC >gi|302034499|gb|GL383252.1| GENE 9 7138 - 8010 647 290 aa, chain - ## HITS:1 COG:Rv0812 KEGG:ns NR:ns ## COG: Rv0812 COG0115 # Protein_GI_number: 15607952 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase # Organism: Mycobacterium tuberculosis H37Rv # 8 274 1 270 289 160 36.0 4e-39 MNSSVPYLLAILGKGVVSPSTMVCHADDLGLVRGDGVFDTTRIVTAQDGTSRIDHLDEHL SRFARSIAGVNGPTPDLDSWNHLIEEAARTWRIPGEAALKLVYTNGRQVVPGPPRGFLII SPLSETAIEEREGIDVLCLSRGVTSDAFADAPWLLGGVKTLSYAVNVAALRYARSQGADD AIFTSTDGYLLEGPTSGLVIAADDGLWTTPTGPTGILNSITVSTVFEAAGEDGVQTSTRL MKHGEVLRAQGAWLLSSVRGVAPILSIDGHPVPQDEDMTHRLRTWAGFEN >gi|302034499|gb|GL383252.1| GENE 10 8234 - 8794 388 186 aa, chain + ## HITS:1 COG:RSp0599 KEGG:ns NR:ns ## COG: RSp0599 COG1309 # Protein_GI_number: 17548820 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Ralstonia solanacearum # 1 179 30 214 214 79 37.0 3e-15 MARSGGTEAVVLREATRRAGVSPNAAYRHFANREALLDEVGLAAADQIGVVMREAVAEAQ PIDDESVAVSQLVAACRAYLDFALTEPGLFDVAYRISDTGLDALNVDRSKAPNLPDSVIQ DVLSDREVTLSDRVDVRSLVILLWSVLHGFASLSTSGPLRGEKTPEWADRVLDVIRASLR GAIARA >gi|302034499|gb|GL383252.1| GENE 11 8794 - 10140 918 448 aa, chain + ## HITS:1 COG:Cgl1936 KEGG:ns NR:ns ## COG: Cgl1936 COG0534 # Protein_GI_number: 19553186 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Corynebacterium glutamicum # 17 445 16 435 435 199 34.0 9e-51 MVRGSRDPGSEVGAGYRQILNLAVPAFLSLIAEPLFLVADSAVVGHLGTAELAGLGVASA ALTTFTGLFVFLAYATTATSSRRMGAGDRQGAAQAGVDGLWLSVIIGLLVAIMLVAIPTT VAGWFGASGAVAEQAGRYLRITGFGVPAMLATMAITGVLRGFQDTRTPLVVTVVTFSANL VLNLWFVLGMGWGIQGSAIGTLVCQIAMAVALVWVLRIRTRGLDLSLVPHLSGIASSLRD GIPLLIRTLALRAALYVTTWVAARSGAITMASYQVTMTMWNLLLMAMDALGIAGQALTGA SLGAGDVRRTRSLTATMTRWGLVAGVVIGIVLAAFHQVVPALYTDDPAVHRAVAAGLLVV AAQQIVAGPAFVLDGVLIGAGDGRWLSGAQVVMLLVYLPMAWAVHLLAPSDPAAAVVWLW VAFSGFMIVRCAILAWRARGDAWMRTGA >gi|302034499|gb|GL383252.1| GENE 12 10200 - 12806 2061 868 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5333 NR:ns ## KEGG: HMPREF0675_5333 # Name: not_defined # Def: RecF/RecN/SMC N-terminal domain protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 868 1 868 868 1333 100.0 0 MKLHRIHVENFKAIDERTLELPDCGVVIATGRNEIGKTSMVEALDLLLDTSTKASSKSRK VRIAQPYGTSLQVVVEAEMTIGDHRFVHRKCFLKDKESSLKFLAGPRAGQTITGDEAVEM METLLSGTDMTLWNALRLMQASGLSPLRLDSSQALTAALEQAGGQQPDEGSGGGLMDRAR AEYDKYFTPGGSERRNVFADRDELEEIRSNLAKGQERLAEVDEVVDSLSRINEQISHDQT VVASKKTDCQKAEAALASLTELEKEVETTKRTAKEAAQRHAEAKRAHDMRAKLIDDLATA QDKYEHCQRVAAELSELGRSVAEEREEAKTAFDEAQRKVTQAEEAETQARQTLTTARVGE ESTKARQQLDRINELKTRITAEQQRLDTEKVTGKALSALREAVKADDLARDKALMASPQL AIEHLADGVSLRIDGADLDVPIGTTNQRRVHGELVMEMGEAWRVRISPTSEVMTLGNDAE KAHQTVVSQLEDLGVASLEQAESRLAERRVMETHISSWREHLEEEQGEVTIQELEAMAER TTETVSITAAEAQKLEEEAVAAANEARTAQRQADNRLRTVEERHVEAHEKVFRANIDAEK TAETVTRLSTELTAARKITSDEALTETLTTAQEQARLTQAEADRAQAALAERNPEQVHTE AEGTRVALTTARDRLENNIRRRAELNGQLQGLGRQQRQTEVDSLTIKEHQLARRVTGLEQ RARSAKLLYQTLAAHLEHVRQSYVAPFTTQIDRIGRGVFGQELHVEIDSTLSVVARQLNG SRLEWDQLSSGAREQLGLIVRLAAARLIDPDDGVPVILDDALVYSDPVRVRHVLAEVAQS AQTSQIVVFTSAPERYDSVPGAQRVDFE >gi|302034499|gb|GL383252.1| GENE 13 12803 - 13948 601 381 aa, chain - ## HITS:1 COG:Cgl1140 KEGG:ns NR:ns ## COG: Cgl1140 COG0420 # Protein_GI_number: 19552390 # Func_class: L Replication, recombination and repair # Function: DNA repair exonuclease # Organism: Corynebacterium glutamicum # 1 362 1 361 365 202 36.0 7e-52 MTRHYLSKRGDDDPQARFTADRIETVRRLGDVARQEGCEFVVVAGDVFETHNVSTQIIAR ACEAIASIDLPVYLLPGNHDSLEPGCLWDGPEFAQRCPSNVQVLRDHAETQIADGNGVVI ATIVASPLTTRHPSTDPLADLVKNLEPAQTPRILVGHGQLEGLSGDAREALISRAPLEDA IARGALSYVALGDRHIAWPTNDNHAAIRYSGTQETTSFNEESVGTAVIVDLGDPLTCQTI NVGTWLHARVSQEVASEADLQALRDRFDSFNRRDRTIIRYDLHGQVTISQKAKLDEIIAD YETVFASLEPSETRHDLTVVGDDISLTEADVPGWVRDAAEELSDMCATNEDAVAALTLLH HLVSAEGASIASTAHTAEVSR >gi|302034499|gb|GL383252.1| GENE 14 14321 - 14812 289 163 aa, chain + ## HITS:1 COG:Cgl1145 KEGG:ns NR:ns ## COG: Cgl1145 COG1846 # Protein_GI_number: 19552395 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Corynebacterium glutamicum # 8 150 6 148 162 101 34.0 6e-22 MTEDSAVWLDDHQQRVWRLWLEVSTTLPAVLNRQLSRDSQLSVQDFEVLVRLSETDGGDM RVVALAEHMGWERSRLSHHLTRMEKRGLIERRVCCSDGRGAIIHLTDQGTAALQQAVPGH AALIRRVVFGGLDCGHLNDLEAILSRICQSLAEEGKVNPTDHS >gi|302034499|gb|GL383252.1| GENE 15 14928 - 16334 1130 468 aa, chain + ## HITS:1 COG:BS_gabP KEGG:ns NR:ns ## COG: BS_gabP COG1113 # Protein_GI_number: 16077698 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Bacillus subtilis # 19 449 9 441 469 314 42.0 2e-85 MAVAATGIPAESGEPAMDKPRMKGRHLVMMSLGSAIGTGLFVGSGKGVAAAGPATLVAYI VAGLLVIAIMYMLGEMVAAHPDSGAFSVYTSRAMGSAAGFAMGWVWWIELVVVVAAEAIA AASTLVAMWPIAPVWLLTLIFLVVLTAINLLGADRFGEFEFWFALLKVVAVVVFLTIGVL LICGVLAAPAAGTSNLVGHGGFLPNGWSGVATALLLVAFSFGGIEIMAVAAAETEDPAHN VSRAVRTIVWRILVFYMGSVAIMVIAVPWDDPELGASPFVAVLNRAGIPAASEVMTLVIV LALLSSLNANLYGAARMLGSLAERGMAPRVAMRTRGRSVPTVAVLASVAFGFCCVLATFE WGDAVLGTLLNIVGSTIIVTYFFTICSHYVLRRRAEKEGAPLPMRLKGFPVVNWAAMILL IGIVVLGMFSPDVRAQLMSTGALVVILYVIGVGWSHHAGRSPFHPTTD >gi|302034499|gb|GL383252.1| GENE 16 16337 - 18064 1247 575 aa, chain - ## HITS:1 COG:MT0151 KEGG:ns NR:ns ## COG: MT0151 COG0038 # Protein_GI_number: 15839524 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Mycobacterium tuberculosis CDC1551 # 37 465 44 476 492 314 49.0 3e-85 MTETAIHPEARAAWAKQLRRLRRALVPHRPKAFRDSLNRWLLMGTVIGIVSGVGAIIFFF CLKTGTHWLLETLGGYTPPGTLGEGGGVAGTRLTRPWAIPLIVAGGALVSGTLVYFVAPT AKGHGTDNAIHAVHHDPTALKGKVAAVKIIASSLVIGSGGSGGREGPTAQISATVISSLC KKLKIATPDARIAVSAATASGIGAIFRAPLGGALLGAELLYRDDMESDAIMPSLVSSIVA FVVFGSVYGFEPIFGSLSGVQFSQPLQLIWFVLLGLTAGLMGKLYVEVFYSGTTLFDRLD KVPGWLVPAIGGLGVGLLGLLIPAALGTGYGSVQQEMFANNLVRMPLLMVLAIPFAKILS TTLSIGSGGSGGVFGPGMVIGGATGAALWRLLEGLPGIPSSPMSFVIVGMIACFGAVAHA PLGVLLMVGEMTGNLSMLAPGMIAVAVAGRVVGDTSIYTSQLKDRLEGRRVHAMGRVTKL SEPKSDDEVASPKPAIKKPSGKNASLSKPAAEPLAKPQAKPATVPSPHPTTAPTPATHQR DTPRIVPEIIRAKDRKHELLARSPKPPNDPGPSSA >gi|302034499|gb|GL383252.1| GENE 17 18061 - 18567 358 168 aa, chain - ## HITS:1 COG:MT1448 KEGG:ns NR:ns ## COG: MT1448 COG1846 # Protein_GI_number: 15840862 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Mycobacterium tuberculosis CDC1551 # 22 149 37 165 175 82 38.0 4e-16 MQISRDATNGLTPDHTDVEIALQASWALIDVAARSLAELAEDVSAPQYRLLVLIDAGVTR GVDLARDLEVHSSTIARMVERLVAKGFIDRSPDPDDRRANVLSLTKRGATLVQNVNEHRR RQLVDLLSHLEPGEIDTVVTGFTLFTRAAEASGHGTPNRPCAEDSNQQ >gi|302034499|gb|GL383252.1| GENE 18 18355 - 19608 920 417 aa, chain + ## HITS:1 COG:SMa2137 KEGG:ns NR:ns ## COG: SMa2137 COG1052 # Protein_GI_number: 16263617 # Func_class: C Energy production and conversion; H Coenzyme transport and metabolism; R General function prediction only # Function: Lactate dehydrogenase and related dehydrogenases # Organism: Sinorhizobium meliloti # 124 410 37 317 324 238 47.0 1e-62 MDFKVTSQIDSARHSGVDEDEESVLRRADIFGKFRQGAGCHVNEGPRCLQSDFNISVIGG QPVRCIPRYLHSGIVAHCISFGDVLCVGGAVTYSDAMARIIVTAPQLMSVVNEELPGHEV VGGDHFMDRQELSRQIATADAILTSLSDPLDAEMIGQGKNLKVIGQCAAGFNNIDLDAAK QAGVVVTSTPGVLHEATADLAFTLLLEVTRRTGEAERWVRAGRAWRYDHTFMLGAGLQGA TLGIVGLGQIGEAMARRGAAFGMNVIYNARHEKDVAAIDAVNLNTQPTRRVELDELFATS DVVSLHCPLTDETRHLVDADALAAMKKTAYLVNTARGACVDEAALVEALKTGAIAGAGLD VFEEEPTITADLLTMENVVLLPHLGSAALPTREAMSRLAARNIAKVLDGKPAETPVE >gi|302034499|gb|GL383252.1| GENE 19 20025 - 21659 1344 544 aa, chain + ## HITS:1 COG:YPO3826 KEGG:ns NR:ns ## COG: YPO3826 COG0578 # Protein_GI_number: 16123961 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Yersinia pestis # 22 536 26 539 551 353 37.0 4e-97 MRTMDADVVVIGGGATGAGVVRDVAMRGYRAVLLDKADLGQGTTGRYHGLLHSGGRYVVS DPGSATECAEENEIVTRIHADAVEKTGGLFVVTPEDDLEFSDQWVEGAKKSKVPFEEIST AQALRREPRLNPGIKRAFAVQDGSVDGWQMVWGAAHSAIEYGAKVMTYTAVTEIIREGDQ ITAVVAHDLKHDEQIRIDCKFVINTAGPWAGRIAELVGCYDVDVVPGRGIMIAMNHRLVN TVVNRCIYPADGDILVPVHTVSIIGTTDVKADDPERLAIPRNEVQQMLDSGEALVPGFRD ARAVHAWAGARPLFKDKRVSATDTRHMSRGMSVLDHGSRDGVNGIVSIIGGKLTTYRLMA KNVVDVMCEQLGDDRPCRTADEAVPGSTVGKNYLITHRLGENEERRAGTGLVRGGDPKTV PSSKKIDNQVICECELMSRKMFTDLLAEQPDATFDDLRRQLRLGMGPCQGGFCSMRATGI AVEEGTIDAERATGLLRLFLKNRWIGLWPILYGEQVRQTALDDWIFQGTFDVEHLPTPQQ EVEL >gi|302034499|gb|GL383252.1| GENE 20 21656 - 22999 1162 447 aa, chain + ## HITS:1 COG:VCA0748 KEGG:ns NR:ns ## COG: VCA0748 COG3075 # Protein_GI_number: 15601503 # Func_class: E Amino acid transport and metabolism # Function: Anaerobic glycerol-3-phosphate dehydrogenase # Organism: Vibrio cholerae # 21 436 6 425 436 129 24.0 1e-29 MSTATVPTKSVTADRFGAQHVVVIGSGLAGLTTALRLRRGGARVTLVTKGVGGLQLGQGT IDILGYTPDRVEKPYQAVQEFASQHPAHPYAKIGVEAVKEGIDFLREVVGDSYLLGDGEA TINVPTAVGAIRPTALVPPSMINGNLKDGDKVVVIGLAQYKDFHAGLIAQNINRTTLPGG GHASARAVVVDFEPREGEYDATGLAIARSLDDARTRRMLAEGLRGFVNPGEIVALPAVLG IDNHSEVLADFKKILGAEVFEIASLPPCVPGMRLNNKLVATAKNERVDYVLGSKVTGCTV ADGKVVSVTVGTAGAGKEIKADAVVLAGGGFESGALKLDSHGHLHETILDLPVTMPEGVK EEDLIHGDYWGSPQPLFLCGVEVDETMLVTYQGKPVHSNVYAAGGVIAGATRWQEKSGEG IALGSAIKAADAILSSVGAGAATKERN >gi|302034499|gb|GL383252.1| GENE 21 23002 - 24252 1199 416 aa, chain + ## HITS:1 COG:YPO3824 KEGG:ns NR:ns ## COG: YPO3824 COG0247 # Protein_GI_number: 16123959 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Yersinia pestis # 17 409 12 415 415 240 33.0 4e-63 MGVIEETFAGHEVSRQSLDACVKCTICETMCPVAKATPLYTGPKYNGPQGERYRDGASVD HSLEWCNFCGICTLHCPQGVKIAELNEQAAAKMKHQNGVPLRDRLIPLTTLEGRVLSPIA PLANWGLNQKPIRIAVEKIIKVHRDAPMPTAQTETLSKWMRHHKPAKPATKGPIVFFQGC AGGYFETETSKKSIEVLEHLGYEVLVPKQGCCGLAKQSNGLFEGATKDILSLCDKIISLG KGLTVVSSSGSCVGMMKHEAHEIMGVDDPRLHDVSVRSRDFSEFLMDEYRNGELDTSQFR SIDITVPYHQPCQVKSQGMGFPAVQLMELIPGVKVLESNEPCCGIAGTYGLKAERYEVAQ RIGAGVFKHMQDHNEGVGVCDTETCRWQISKSSGVKIVHPVWLLHHSLGLSNNLLD >gi|302034499|gb|GL383252.1| GENE 22 24576 - 25151 251 191 aa, chain - ## HITS:1 COG:AGl2973 KEGG:ns NR:ns ## COG: AGl2973 COG2094 # Protein_GI_number: 15891599 # Func_class: L Replication, recombination and repair # Function: 3-methyladenine DNA glycosylase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 8 187 26 193 201 120 42.0 2e-27 MIDLSAPAIEVAPLLLGATIWRGPVGIRLTEVEAYMGLDDPASHAFRGPTPRARVMFGPP SHIYVYLSYGMHRCVNLVCSPDGEASAVLLRGGQVIAGHDDARRRRGNVAENRLACGPGN MGSALGASLEESGNPVSIIGNGAISALGWRLEPAPEIAEFRQGPRVGISRNIDAPWRWWI PQDPTVSGPRT >gi|302034499|gb|GL383252.1| GENE 23 25148 - 25465 226 105 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5321 NR:ns ## KEGG: HMPREF0675_5321 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 105 1 105 105 153 100.0 3e-36 MKLNRAENVNTAEVAGLGLVGGWLTARTTGVRPLGGTVLAAAGCWAGRTWLAKSGPTIAG LLGATYLAAFGASHGLAKKIGAWPAVITVTAATCTACHFLCDTKA >gi|302034499|gb|GL383252.1| GENE 24 25612 - 26613 734 333 aa, chain - ## HITS:1 COG:Cgl2948 KEGG:ns NR:ns ## COG: Cgl2948 COG0604 # Protein_GI_number: 19554198 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Corynebacterium glutamicum # 1 331 12 335 337 263 43.0 3e-70 MHAVAITGPLPVSDPECFVDVDLPIPEPGPHDLLVEVQAVSVNPIDIKLRKEAGTLSHPR VLGFDAASVVRAAGSEVNGFSVGDEVWHSGNRDRPGTYSQFTLVDSRIVSKRPPSLSIAE AASLPLTALTSWEALIDHIRLGTPEERSNKAFLMIGGAGGVGSAAIQLARAITSGPVVAT SSRPESAQWCQDMGATGIINHREPLAPQVNDFGITGFDGILSAYTPPASTLAEIIAPFGH LVMIDGTDSFDLMAFKSKSLTVTSESMFSRPQFATPDVAEQGRALASIADLVEKRQIRPT MTRHIEGLTAQHVREATAAVESGAMIGKVVITL >gi|302034499|gb|GL383252.1| GENE 25 26664 - 28010 1170 448 aa, chain - ## HITS:1 COG:Cgl2923 KEGG:ns NR:ns ## COG: Cgl2923 COG0305 # Protein_GI_number: 19554173 # Func_class: L Replication, recombination and repair # Function: Replicative DNA helicase # Organism: Corynebacterium glutamicum # 14 448 74 509 510 486 59.0 1e-137 MSSAPAEPGPSLDRNPPQDIDAEKSVLGAMLSSKDAIADVVEEIKGVDFYRPGHELIFNT ITDLYGRGDPADTVTTADELDRRGELERAGGRLYLAELLTNVTVTANAAYYAKIVAEKAV LRRLVEASIRIAQMGYQGQGEVADIVDAAQQTLYDVSTRKTSEEYHPLSELFESTFDELE AIEARGDAMAGIPTGFTDLDELTNGFMPGQMIIVAARPAMGKSTLALDFARAAAIKNHLA AAIFSLEMGRNEIVMRLLSAEAGIELSRMRAGRLSEEDWQRMVDKTTQISSAPLFIDDSP NLTMMEIRAKARRMKQKFDLKLVIIDYMQLMTSGKKVESRQLEVSEFSRQIKLLAKELEI PVVALSQLNRGPEQRTDKKPMMSDLRESGSLEQDADVVILLHREDVYDKESPRAGEADII VAKHRNGPTRTVPVVFQGHYSRFVDMQR >gi|302034499|gb|GL383252.1| GENE 26 28194 - 28541 174 115 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313803247|gb|EFS44443.1| ## NR: gi|313803247|gb|EFS44443.1| hypothetical protein HMPREF9576_00372 [Propionibacterium acnes HL110PA2] hypothetical protein HMPREF9615_00025 [Propionibacterium acnes HL002PA3] hypothetical protein HMPREF9343_00104 [Propionibacterium acnes HL099PA1] # 75 115 1 41 41 65 97.0 1e-09 MIPRDMVTARGTTAVTRVGHASSSAPESTPRGYLRQGRNLPVTSRHTRRACRWFDGPSNP LRRPPSISTAPVDNVSLDGTHVAFKPYLYTSQPNTVSPATRRKFSSNNSHSDYNP >gi|302034499|gb|GL383252.1| GENE 27 28482 - 28880 367 132 aa, chain + ## HITS:1 COG:ML2609 KEGG:ns NR:ns ## COG: ML2609 COG1937 # Protein_GI_number: 15828408 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mycobacterium leprae # 40 132 43 135 135 120 62.0 9e-28 MTNSGDGCCAPGGDHVAGDHDVESSAPGETCGACGCNHPQHGYLGHKDMHLRRLKRIEGQ VRGLERMVDEEKYCIDILTQVSAVTSALKSVSLELLAEHMSHCVARAAQAGGQEAEDKIA EANQAIARLVKA >gi|302034499|gb|GL383252.1| GENE 28 28904 - 29296 283 130 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5317 NR:ns ## KEGG: HMPREF0675_5317 # Name: not_defined # Def: heavy metal-associated domain protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 130 1 130 130 144 100.0 8e-34 MHKTYTINGMTCEHCVKAITEEVSALDGVDNVTVSLESGSMTIDSAEEIPFGKVADAVDE AGEYTVAEASSLDTAGHPGGQCGCGGHGHAGKKAEGSGCGCGGHQHSEEAAAKHAEHASK GGCGCGGHQA >gi|302034499|gb|GL383252.1| GENE 29 29111 - 29449 192 112 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSGVTGSLTGSPSDPGGRWVVGKVNVGGRGLTASCGPNPGPDVKISTETNGSGLVTAAAA AAFTSVLGMLSSSLLGVLVSAAAATRSFSFLPGVAMTSTAALTTGVTGSIKR >gi|302034499|gb|GL383252.1| GENE 30 29485 - 31743 1608 752 aa, chain + ## HITS:1 COG:Cgl0382 KEGG:ns NR:ns ## COG: Cgl0382 COG2217 # Protein_GI_number: 19551632 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Corynebacterium glutamicum # 22 741 17 747 755 595 49.0 1e-169 MSTPTHPDAQSELKDATEPTSINLDITGMSCASCAARIAKKLNKVDGAQATVNYATSKAH VLTTKPIEVDDLIGVVEAAGYGASVPTPAAPPEDHAAKIRARLIVAIILAVPVMLLSMIP ALQFDGWQWLALALSLPVVFWCGEGFHRAAWTNLRHGATSMDTLISLGSLVSLGWSVWAL MWGSAGHVGMRHRMTWALERTDPSSALYLEASVGVITFILIGRWIEARNRAEAGSALQAL LRMGAKSVRMIRDGQEVTVPIEALTVGDHFVVRPGEKVATDGRVAEGSSAIDASLVTGES LPVEVAVGDEVIGATVNTSGRLVVEATAVGSDTELSRIATLVEAAQTSRSKTQDLADKVS SIFVPTVLIISALTMIVWAVLGQGVTAAFTAGVAVLIIACPCALGLATPMALLAGTGRGA RLGIVIKGAGSLERARGIDVMAMDKTGTLTTGRMAVVAVWDESGRVVNISDNPPALAVTA ALEVGSEHPISRAIVEACPGVAPAEDFRALPGLGVSGTVNGLPAKAGRVSLFDAIPDTLS KNVERAQAEGRTVLVVGRGDDILGAIAVSDEIKPEAVVAVKRMVQAGVRPVLVTGDNSGA AAHVASELGIDEVMSEVMPADKVDVVTRLRSDGSRVAMMGDGVNDAAALQTADLSIAMGT GADVAIAASDIICTRGDPRLAVDALSLAHATDRTIRQNLFWAFAYNVIAIPVAAVGLLSP VIAAAAMAFSSIFVVTNSMRLVRWHPGMSDSN >gi|302034499|gb|GL383252.1| GENE 31 32023 - 33216 965 397 aa, chain + ## HITS:1 COG:BS_yabE_1 KEGG:ns NR:ns ## COG: BS_yabE_1 COG3583 # Protein_GI_number: 16077108 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus subtilis # 1 300 39 339 341 101 28.0 2e-21 MSKVVASAIAGALSLTSAGGLTMVQALDRDTVTFSVDGVSQQAKVKPGTVKQALAQQGIT VGPHDDVQPSLDSEIHGGQVITVNYGRRVVVTIDGKKVVRWTTAKNVAEVLAQLNQSDPD NLVSVSRSLDISRAGLSFSMQTAKDVTVTIGGKTQKITAVGTVADALKAAKVEVDSSDAV NPGLGTPLSDGMKITLTMVDQKSQKRRVAVPFSTKKVEDSSLPKGEIKVITKGVNGINEE TWTVVFKDGKKVSEKKVSSKVVNAPVTQVVKVGTKTASSSSPSTRSSSASHRSTASQSSD PVTSGTTCLASTYGEGDGTAGGPTASGETFDPSAFTAASKTLPLGSTIRVTNVSNGRTVT VRINDRGPYVGGRCLDLSTAAMNAIAPGQGLVTVRYS >gi|302034499|gb|GL383252.1| GENE 32 33287 - 33769 425 160 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5314 NR:ns ## KEGG: HMPREF0675_5314 # Name: not_defined # Def: bacterial transcription activator, effector binding domain protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 160 1 160 160 305 100.0 4e-82 MDRPVNIREVEACRVISMTRVVSIDELGPFMDEAFGILERLAPGDPTLGKASPFVIYHDG LTAEHDGTVEVCQPIRGTIDDAVLPLDVAVRTVEAHREAWVTVTKAELEYPDIDEIYDAF DAWLEEAGLVRSAAPREAYWADWDTTGMEEPVCDVCFPIE >gi|302034499|gb|GL383252.1| GENE 33 33769 - 34620 604 283 aa, chain - ## HITS:1 COG:TM1693 KEGG:ns NR:ns ## COG: TM1693 COG0204 # Protein_GI_number: 15644441 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Thermotoga maritima # 31 229 55 241 247 80 29.0 4e-15 MASVKPTKDRGRYTNDLSAATRQAANMLLLRPLVWKVVKVSVHGADNLDGLDGAYVAVAN HSSHLDAPLVFGALPKRLSKYLATGAAADYFFTAWWKAIAPVLFFNAFPVDRGKGKSKQG ARSPRSHRGMAGSLLTDGVPLLIFPEGTRSRTGAMGTFKPGAAALAISRGVPVIPIALVG AWAAMPSEQAGLPKGRPSVHVAIGHPMDPVPGEIAHQFSERIRRQVIELHDQTARAYGMP TLDEYGRHRALSQASESGDTASTNHSTCTSKEPAEPPRPNGGQ >gi|302034499|gb|GL383252.1| GENE 34 34622 - 35431 197 269 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163797523|ref|ZP_02191474.1| 50S ribosomal protein L9 [alpha proteobacterium BAL199] # 3 228 6 229 259 80 29 2e-14 MATSMVTGGTSGIGREFVTQLAARGDDIVIVARDTERMAAIKADVEARYGVSVETIAADL SRREDVDQITTRVEDPNHPVDLLVNNAGFAVHAKILDPEALELHDRAVEVMMRAVLVLSA AAGRAMKARGHGAILNLSSSSAWINTGNYSAIKAWVLTFTEGLSNELAGTGVKAMALCPG WVHTEFHSRANVTANHLPDFFWIDAEVLVREALNDLDHDKVVSIPTPLWKFFIAVATHTP RSAMRFLSRTLSSSRDKDDHPRHTPGGEA >gi|302034499|gb|GL383252.1| GENE 35 35543 - 36340 619 265 aa, chain + ## HITS:1 COG:MT0699 KEGG:ns NR:ns ## COG: MT0699 COG0648 # Protein_GI_number: 15840073 # Func_class: L Replication, recombination and repair # Function: Endonuclease IV # Organism: Mycobacterium tuberculosis CDC1551 # 5 264 2 249 252 235 52.0 7e-62 MTKWIIGGHVDTADAVAQAAARGADIAQISLGDPKSWKKPVCDFPGGSLALREAAGEAGL TLVVHSAFVINVASLNNRIRIPSRKLLQQTLDAAAEVGAMGVVVHGGHVRAGEPIEKGQD NWRKAIDGLEMSVPLFVENTAGGDNAMARFLERLSGTWEAIGAASGHENVGFCLDTCHAF AAGLDMASLVDDVRGITGRINLVHANDSQGAVGSGRDRHANLGEGQCEADTLVDVIRAAE APVVVETPGEAEGQARDIAWLRERL >gi|302034499|gb|GL383252.1| GENE 36 36414 - 38348 1358 644 aa, chain + ## HITS:1 COG:VC2484 KEGG:ns NR:ns ## COG: VC2484 COG1022 # Protein_GI_number: 15642480 # Func_class: I Lipid transport and metabolism # Function: Long-chain acyl-CoA synthetases (AMP-forming) # Organism: Vibrio cholerae # 30 628 4 595 601 381 35.0 1e-105 MAASTHQPGRAELDPAGELLGKPVPGENFIESHLAHMFRATVANHGFRPATRVRQGGQWI IRTYAETGRRVAGLARAFVTPGLLTEDGLQRGDRISLFAGNCPEWIEADLAGMTIGVIPV PIYPTSTPDQIVHIVTDAGVRVIITAGPKELDRILEARDQMPGLETVILINPADQVGDHD GLTVLSLEQVRQAGVSEEIQTVVEERMGQSCPDDVAALIYTSGTTGEPKGVMISHRAALA ELQALDAFFDVTPADHSLSFLPLSHALEWGWSMAVIRHGCLNTFVPNPKTISAMLAEVRP TLFVSVPKLYEQVMSVAREKVSDSPAKLKIFEWSIRIGREWWQAEQEGRRPSVSLRARHG VADRLVLKAIRDAIGGPKTVLAAGGAPLRKEVEEFFAACGLLVCQGYGLTEASPLVSFNS PGGYKFGTAGRPLVGSQMTTTEDGEILYRGPNVMKGYWKAPEATAAAIEDGWLHTGDIGH IDEDGFLVITDRLKDIIVTLNGKNISPQPIENSLMKDPLFEHAVLLGDNRPCLTLLVKPS LPQVEELAERLHITSMTGPEMLRSEELAEEIRRRVAEITEKLPHQEQIRDLRVLWDEFTT DNGLLTPTLKVRRREVEKRFTEIVEEMYARLAARRRAGKRDSKH >gi|302034499|gb|GL383252.1| GENE 37 38730 - 40217 1409 495 aa, chain + ## HITS:1 COG:VC1826_3 KEGG:ns NR:ns ## COG: VC1826_3 COG1299 # Protein_GI_number: 15641828 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, fructose-specific IIC component # Organism: Vibrio cholerae # 136 492 10 357 359 304 51.0 3e-82 MKKYVGITACPTGIAHTYMAAEKLEETAKETGNQIKVETQGSIGVENELTADDIREADAV VVAADTEVDLSRFDGKRVLVTGVQDGISRPAELLEQALTAPTRGGAGAAEPSDEPAAETG TTSASKDGKESVGHTLYTALMAGVSHMIPFVVCGGIMIALALGIGGKPTAGGVAVPEDSF WQTILQVGTLAFSLMIPILAGFIAQAIADRPGLVVGMVSGFIANSGAQFPYLTTTGPGGT KTGLNTGFIGAIVIGFIAGYVAKWMRKIPWHEYVKPIVPILIVPIFGTAIVSLLYVYVLG RPLAALFNGLTHFLASMTTSSITVLAIIIGLMVSFDMGGPVNKVAFLFAGGMIAVDQGKV MGLAAAAIPVAPLGMGLATLIDRRLFTKQERDAGIAALFMGLFGITEGAIPFAAADPARV IPSNMVGGAVAAVLAGMFGVHDVVMHGGPIVGVLGACKPLLGFFTAILIGALVTAFMSLA LKRITARKKDRAVTA >gi|302034499|gb|GL383252.1| GENE 38 40241 - 40702 524 153 aa, chain + ## HITS:1 COG:BS_fruA_1 KEGG:ns NR:ns ## COG: BS_fruA_1 COG1762 # Protein_GI_number: 16078504 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Bacillus subtilis # 4 148 3 146 169 102 40.0 2e-22 MATIADLLDERSIDLSLSSGDKDDAIERMVDLVDASGALLDRDVLIKAVRAREEAGTTGL GDGIAIPHGKCDGVDRPALAFARSDEGVRWGAPDGSLASLVFLIAVPEAAAGNEHLRILA SLARSLVKADFRNQLLAASTPQEVREVLAGISA >gi|302034499|gb|GL383252.1| GENE 39 40880 - 41263 305 127 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5306 NR:ns ## KEGG: HMPREF0675_5306 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 127 1 127 127 244 100.0 1e-63 MGLRDLLMNHGMAEGGLDLPDVLNALAKGAVLVDVRTAREYEAGHAPGARLVSPKELLAD PFTAVYGDDPLAEPNPHFILVCDTGFRSGHLVAPVREKGYNCDFLASGLHAWRAGGEILI PGPPRGR >gi|302034499|gb|GL383252.1| GENE 40 41785 - 42075 487 96 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843665|ref|YP_056892.1| 30S ribosomal protein S6 [Propionibacterium acnes KPA171202] # 1 96 1 96 96 192 100 5e-48 MRKYEVMIIIDPTVEERQVDSLMEKYLKVITDEKGTVDNVDVWGKRRLAYDIQKKSEGIY VVVNATCEPATIQELDRLLAIDEKIMRTKVMRPEIH >gi|302034499|gb|GL383252.1| GENE 41 42203 - 42757 566 184 aa, chain + ## HITS:1 COG:MT0060 KEGG:ns NR:ns ## COG: MT0060 COG0629 # Protein_GI_number: 15839431 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Mycobacterium tuberculosis CDC1551 # 1 184 1 164 164 165 54.0 6e-41 MAGETPITVIGNLTADPELRFTPNGVPVANFTVASTPRTFDRQTNEWRDGEAMFLNCSVW RQFAENVAESLSKGMRVIVSGNLKARSYEDRNGNRRTSYEIDVIEIGPSLKFAAAKVSRN QSSGGGNWGGNSAGGQGGWSGGNGGQGGNWGGNPGNQGSYNNGDANRGGGVDPWASAQTD EPPF >gi|302034499|gb|GL383252.1| GENE 42 42884 - 43123 384 79 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843663|ref|YP_056890.1| 30S ribosomal protein S18 [Propionibacterium acnes KPA171202] # 1 79 1 79 79 152 100 4e-36 MAGPQRKSVNKKKVVPIKTVHIGAVDYKDTALLRKFISERGKIRARRVTGLSVQDQRKVA IAIKNARELALLPYASTAR >gi|302034499|gb|GL383252.1| GENE 43 43137 - 43586 747 149 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843662|ref|YP_056889.1| 50S ribosomal protein L9 [Propionibacterium acnes KPA171202] # 1 149 1 149 149 292 100 3e-78 MKLILTAPVAKLGVPGDIVEVKDGYGRNYLLPQNYAIKWTRGAEAQIKDITRARKAKEIK SKEEAEQIRSQLEHLVVQVTVQVGENGRLFGAVTPGDIALAVRKAGGPALEKRSIEITKP IKTIGKHTVGVKLHDAIKGHVTVETVPAA >gi|302034499|gb|GL383252.1| GENE 44 43798 - 44043 169 81 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5300 NR:ns ## KEGG: HMPREF0675_5300 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 81 5 85 85 158 98.0 6e-38 MQDRYANCHELVPDTLKDLLGLVVEGKGQGVGEHNTGLPVDVVCHNSPPHMCYKAVNTVT FSFKDGPRSNHDAEGGANGGK >gi|302034499|gb|GL383252.1| GENE 45 43909 - 44547 282 212 aa, chain + ## HITS:1 COG:no KEGG:PPA2226 NR:ns ## KEGG: PPA2226 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 212 1 212 212 421 100.0 1e-116 MTDDVDWQPGIVFTHTLSLTLDDKAQEILQSIRDQLMAVGVPVLHQPAHITVAAVSTMEG VDSHLVDVGWPERITLTKSCRLPNSDGVVGLCPHDPTSSDPVTIFDTSSEGEPELCSAPP SVGSFRALTCLPEDLRRPHELLHRRLAAAGVIAFNYYGPRWWNPHVTMGYQVPPELQGRA VRIVAGVGSLEVGVAGVSVWRVGDGHAYRLWP >gi|302034499|gb|GL383252.1| GENE 46 44636 - 44866 148 76 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5299 NR:ns ## KEGG: HMPREF0675_5299 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 13 76 1 64 64 107 100.0 1e-22 MWAIQAQTGDRRMGVEKSHLGSRRIISVTLLYSRRRFSHLFTLALATSPQLGAEGLQGWV IRTRLMISRGHGFLTA >gi|302034499|gb|GL383252.1| GENE 47 44878 - 45396 613 172 aa, chain + ## HITS:1 COG:Cgl2474 KEGG:ns NR:ns ## COG: Cgl2474 COG1528 # Protein_GI_number: 19553724 # Func_class: P Inorganic ion transport and metabolism # Function: Ferritin-like protein # Organism: Corynebacterium glutamicum # 1 163 1 162 162 144 49.0 1e-34 MNMSDDILKAFNDQITLELTADMTYRQLAIEADAQDLSGMAAWLRHQADEEIVHANKFID HTLDRGSHPRIGTIEAPEVEVGLSALEIFQAALAHEEKVSEAIRELYRACTSAGDIDAIP LLQWFINEQIEEEATVDEIVGRIELIGDDGPGLLRLDAELGSRNVESTENEG >gi|302034499|gb|GL383252.1| GENE 48 45608 - 46462 832 284 aa, chain + ## HITS:1 COG:AGc1833 KEGG:ns NR:ns ## COG: AGc1833 COG1968 # Protein_GI_number: 15888341 # Func_class: V Defense mechanisms # Function: Uncharacterized bacitracin resistance protein # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 284 3 276 278 189 41.0 4e-48 MNWLHAIILGIVEGITEFLPVSSTGHLRIVEKLLGYDIQGAGITAFTAIIQVGAIIAAIL YFWSDIVRIVVAWCKGLAHKEDRDDPDYTLGWGIILGSIPVGVVGLVFKDAIETTLSSLW VVAIALILWSGVMWLGDRQLGLNRGMKEIGIVDAIVIGCFQALAPLFPGISRSGATISAG LFRKFDRATATRLSFFMGIPALVAAGIYESVSAASDISIAQGGAVAIGWGPTILATVVSL IVAYVSIAWLLKFVSSNKFTGFMWYRVVVGLIIIGLILSNVVTA >gi|302034499|gb|GL383252.1| GENE 49 46515 - 46889 185 124 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5296 NR:ns ## KEGG: HMPREF0675_5296 # Name: not_defined # Def: siderophore-interacting protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 124 1 124 124 230 100.0 2e-59 MALPAVANTLATLPISARATIVRVNSHHDYPLPLTDRVTVVTAPRDPDGIVATVQGLDLP QNTHAFVHGEAAMVRPMRRHLRLERGLPRDRIHPSAYWFAGRDADGWRAIKQDFNRSMDA ESGD >gi|302034499|gb|GL383252.1| GENE 50 47032 - 47292 125 86 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5294 NR:ns ## KEGG: HMPREF0675_5294 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 86 1 86 86 169 100.0 3e-41 MAKTQCLARIREVRHDIPHVISIDFEPCGMPSITSVDEHVKIVLPSDGSDLRQPVRDDAA LPFLRTYTRRRWFEDGSWGIDVLVWP >gi|302034499|gb|GL383252.1| GENE 51 47733 - 48464 275 243 aa, chain + ## HITS:1 COG:CC1885 KEGG:ns NR:ns ## COG: CC1885 COG2360 # Protein_GI_number: 16126128 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Leu/Phe-tRNA-protein transferase # Organism: Caulobacter vibrioides # 30 217 10 194 217 125 43.0 5e-29 MTVPELFGDPDQWPDDDLIAITGVLSPHLVLAALHEGVFPMPITGDEVPRELRGATAWWS PMRRGILLPGQLKVARSLRKTTKHHTTSVDRAFDEVITRCADPTRPYAWIGDRVMEVYRY LHDRGWAHSVETWNAQGRLVGGLYGVSVGGFFSGESMFHDPEYGRDASKTALMRLVCELG PGLLDVQWSTPHLARLGVIDVDRAEYLALLSDALERPSPQWTSLDDPAWNGGHLLERLRK MTN >gi|302034499|gb|GL383252.1| GENE 52 48711 - 48908 100 65 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313765175|gb|EFS36539.1| ## NR: gi|313765175|gb|EFS36539.1| hypothetical protein HMPREF9567_00814 [Propionibacterium acnes HL013PA1] hypothetical protein HMPREF9574_02107 [Propionibacterium acnes HL074PA1] hypothetical protein HMPREF9580_00240 [Propionibacterium acnes HL087PA2] hypothetical protein HMPREF9585_00110 [Propionibacterium acnes HL083PA1] hypothetical protein HMPREF9589_00057 [Propionibacterium acnes HL059PA1] hypothetical protein HMPREF9593_00686 [Propionibacterium acnes HL046PA2] hypothetical protein HMPREF9604_01000 [Propionibacterium acnes HL036PA1] hypothetical protein HMPREF9605_00986 [Propionibacterium acnes HL036PA2] hypothetical protein HMPREF9611_00343 [Propionibacterium acnes HL063PA1] hypothetical protein HMPREF9612_00623 [Propionibacterium acnes HL063PA2] hypothetical protein HMPREF9616_00022 [Propionibacterium acnes HL007PA1] hypothetical protein HMPREF9617_00893 [Propionibacterium acnes HL056PA1] hypothetical protein HMPREF9597_00057 [Propionibacterium acnes HL005PA4] hypothetical protein HMPREF9598_00444 [Propionibacterium acnes HL050PA1] hypothetical protein HMPREF9600_00849 [Propionibacterium acnes HL050PA3] hypothetical protein HMPREF9606_00980 [Propionibacterium acnes HL036PA3] hypothetical protein HMPREF9608_00014 [Propionibacterium acnes HL067PA1] hypothetical protein HMPREF9609_00732 [Propionibacterium acnes HL027PA1] hypothetical protein HMPREF9613_01029 [Propionibacterium acnes HL002PA1] hypothetical protein HMPREF9614_01310 [Propionibacterium acnes HL002PA2] hypothetical protein HMPREF9564_00014 [Propionibacterium acnes HL053PA1] hypothetical protein HMPREF9594_00020 [Propionibacterium acnes HL005PA1] hypothetical protein HMPREF9595_02575 [Propionibacterium acnes HL005PA2] hypothetical protein HMPREF9596_01761 [Propionibacterium acnes HL005PA3] hypothetical protein HMPREF9569_01083 [Propionibacterium acnes HL078PA1] hypothetical protein HMPREF9610_00073 [Propionibacterium acnes HL027PA2] hypothetical protein HMPREF9615_00054 [Propionibacterium acnes HL002PA3] hypothetical protein HMPREF9583_00221 [Propionibacterium acnes HL038PA1] hypothetical protein HMPREF9590_01794 [Propionibacterium acnes HL059PA2] hypothetical protein HMPREF9592_00053 [Propionibacterium acnes HL046PA1] hypothetical protein HMPREF9602_01374 [Propionibacterium acnes HL030PA2] prephenate dehydratase [Propionibacterium acnes HL096PA2] prephenate dehydratase [Propionibacterium acnes HL096PA3] hypothetical protein HMPREF9570_00256 [Propionibacterium acnes HL043PA1] hypothetical protein HMPREF9571_00833 [Propionibacterium acnes HL043PA2] hypothetical protein HMPREF9581_00283 [Propionibacterium acnes HL087PA3] hypothetical protein HMPREF9579_00343 [Propionibacterium acnes HL087PA1] hypothetical protein HMPREF9563_00758 [Propionibacterium acnes HL020PA1] prephenate dehydratase [Propionibacterium acnes HL099PA1] # 1 65 15 79 79 122 100.0 9e-27 MSRIAFRPTKDRLGGYCFSIDAIGHVEDERIADALKGLYRSSRMMIFLRFYQKCLHKGFY LARRT >gi|302034499|gb|GL383252.1| GENE 53 48938 - 49243 119 101 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|332676605|gb|AEE73421.1| ## NR: gi|332676605|gb|AEE73421.1| hypothetical protein PAZ_c23100 [Propionibacterium acnes 266] # 1 101 8 108 108 187 100.0 2e-46 MSRPRSRLPRSLENNDGLAFPGVAHLTTVRLSEQGFGEFCRSRSSGWFVCDSPVRIVEHI NRARSVPRRDLVEIKTKGHKNDERQDAYERYYRRSLRPQCC >gi|302034499|gb|GL383252.1| GENE 54 49179 - 49997 1035 272 aa, chain + ## HITS:1 COG:DR1314 KEGG:ns NR:ns ## COG: DR1314 COG3861 # Protein_GI_number: 15806332 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Deinococcus radiodurans # 24 266 93 308 330 68 28.0 2e-11 MTNDKTPTNATIDALYDRSVVDQSGNKIGEIGQVYLDDASGQPAWVTVKTGLFGRNETFV PFKGLETSGDQIRAPYTKDKVKDAPNVDPDGHLSEDETDELYRYYSDTFASDSKAADTNT NQGVAGQKVAGTESAADTKAQTTADQKSPVAGDGSVVRHEERLNVGKERVESGRMRIRKH VVHDTETVEVPVEREEIHVERVPLDEKVAADDAKLSEGTQDIVTHEERPVVNKETVGVEK IKIGKEAVQDTETVSGKVAKEQIDIDNAKHTK >gi|302034499|gb|GL383252.1| GENE 55 50084 - 51358 1276 424 aa, chain + ## HITS:1 COG:Cgl2831 KEGG:ns NR:ns ## COG: Cgl2831 COG0172 # Protein_GI_number: 19554081 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Seryl-tRNA synthetase # Organism: Corynebacterium glutamicum # 1 424 11 429 432 482 58.0 1e-136 MIDPKLLRTDPDAVRRSQAARGEDSSVVDDVVAADEARREAIAAHENLRAEQKGLGKRIA KASGDEKAELLSRTKTISGEVADLKKAADEADAKFTELAKTLGNIVIDGVPAGGEDEGVI KETVGTPRDFAAEGFEPKDHLEIGEALGAIDMERGTKISGSRFYVLTGVGAQLEFALLNL AMSKAAQWGFTPMIPPALVKPSAMEGTGFLGQAADDVYYLPKDDQYLVGTSEVALAAFHS DEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWFDKVEMFVYCLPQEAEAWHEK LLSFEKDFITALQIPFQVLDVASGDLGLSAARKFDCYGWLPTQNRYREITSTSNCTTFQA RRLSIRHRGPDGVEPLATLNGTLCAMTRIIIMLLENHQQADGSVRIPEALRPYLGGREFI EPVK >gi|302034499|gb|GL383252.1| GENE 56 51355 - 52143 442 262 aa, chain + ## HITS:1 COG:Cgl2030 KEGG:ns NR:ns ## COG: Cgl2030 COG1085 # Protein_GI_number: 19553280 # Func_class: C Energy production and conversion # Function: Galactose-1-phosphate uridylyltransferase # Organism: Corynebacterium glutamicum # 8 262 13 262 442 257 49.0 2e-68 MNDDPYYRELPDGTIKQVNPFTGTKVWTVPGRGARPLGKQAEQTRELADHDRRAACVFCP DNYLSTPPEKTRLVKRAGGLVRGHDLIRCVPADRLDATVPEFRRVPNLFEILSWRYWQLN WGMSLPRAARDWQEEYLSNPSGEAHVRSGLNAKFKAVGSDRRAEDLGPQELREASAAFFA GGHDVIVARRHYTDEGTTTADIAGSASLSVNEHRAFMALTVDSMAQLHRHNEHVRYVVVF QNWLKPAGASFDHLHKQVVAID >gi|302034499|gb|GL383252.1| GENE 57 52165 - 52680 237 171 aa, chain + ## HITS:1 COG:Cgl2030 KEGG:ns NR:ns ## COG: Cgl2030 COG1085 # Protein_GI_number: 19553280 # Func_class: C Energy production and conversion # Function: Galactose-1-phosphate uridylyltransferase # Organism: Corynebacterium glutamicum # 8 165 278 436 442 153 43.0 1e-37 MLPKAVLDPGIFNRWGPDFAVEHGLVLACNDGAVMTVGFGHRYPSVEVWSTSRVDQPWRV DDEGIDAVSDLLHAAHVAVSDDVPANEEWHYRPMGTGVPVPWRIILKLRTSTLAGFEGGT KIYVNTISPTTLAAMLLPKLFEARAAGRIAAMNLGDECEIPRGVLAVTRER >gi|302034499|gb|GL383252.1| GENE 58 52800 - 53558 127 252 aa, chain + ## HITS:1 COG:PA3508 KEGG:ns NR:ns ## COG: PA3508 COG1414 # Protein_GI_number: 15598704 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 26 252 35 258 277 94 30.0 3e-19 MEPSRSTITALEVLGALSEHVEPQYASALARRLGIPRTTTYRILAALVSEGYAVHDSELG RYSLGPAAYELAAAYQRQEPLRRVSLPIIDHLVDETHSSIHLALLRGSEVIYVVEQRGIH TPSLITEVGVRLPAEITASGRAMLSCLSWTQVDALYPSSAELSAGHSNSPTSTTELHAML AETRKRGWAREIDSVTVGWSTLAVPVVDVSGYPLASLATTYRTALESSQLDQALLGHLFA AARAIQYRLGAR >gi|302034499|gb|GL383252.1| GENE 59 53784 - 54932 483 382 aa, chain + ## HITS:1 COG:MT3374 KEGG:ns NR:ns ## COG: MT3374 COG1960 # Protein_GI_number: 15842864 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Mycobacterium tuberculosis CDC1551 # 2 378 12 388 389 392 54.0 1e-109 MLYHLSEEHEMLRQFVREFAESQLAPNAAEVDDKGVFAQQQYDALVEAGFAAPGIPEQYG GDGADAIASAIIMEEVARVCASSSTVISSNELGTVPLLKYGSEEQRKRYLSEVASGKALF GYALSEADAGSDPAALKCRADEDGDSFVLNGVKAWVTEAGEAKYLVVFAVTDPDDPRHRI SALMVHADDPGISYGAPEHKMGIRGSVTREVVFKNTRIPKERVIGRRGHGLSVALGTLDN SRVSIAAQAVGIAQGALDIATDYVQKRKQFGQPLSNFEGIQFMLADMAMRLEAARALTYS AADRSGRQTDDVSYFGAAAKCFASDTAMAVCTDAVQLLGGIGYSKDSAVERMFRDAKVTQ IYEGTNQIQRIVIARQLFNRSR >gi|302034499|gb|GL383252.1| GENE 60 54970 - 56136 413 388 aa, chain + ## HITS:1 COG:SMb21182 KEGG:ns NR:ns ## COG: SMb21182 COG1804 # Protein_GI_number: 16264596 # Func_class: C Energy production and conversion # Function: Predicted acyl-CoA transferases/carnitine dehydratase # Organism: Sinorhizobium meliloti # 6 377 5 384 394 277 40.0 3e-74 MSKGVLEGVKVLDLSRVLAGPYCGAFLADLGADVVKVEAPNGDDARHLGPFKGEESVYFA ELNHGKRSVVLNFKDPKDHERFMKLVEHADVVLENFRPGVTKRLGVDAESVHKTNPRIIY ASISGFGQEGPFRNRPAYDLIVQAMSGIMAATGPEGGKPTRVGESLGDVVSGIFAGWAIC AALYERERTGVGRTVDVSMFNSLLALQVTNLSLLLADGKLPGRIGNRHPVSVPFDTYPAK DGLVALAVANDRIWARLADLMGRPDLGANDAYLGDMNRANKRQELTQLVSGWTQTMTVAE LLRKTEEAGVPAAPIWDLKEALESEHVVARHSLGHFTHPELGKMPYLRFPADFGCGNLEV SSESSPRLGEQTAGAVAAEWGRSANDDK >gi|302034499|gb|GL383252.1| GENE 61 56245 - 57006 393 253 aa, chain + ## HITS:1 COG:ydiQ KEGG:ns NR:ns ## COG: ydiQ COG2086 # Protein_GI_number: 16129653 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, beta subunit # Organism: Escherichia coli K12 # 1 250 1 252 254 96 30.0 5e-20 MTIAVAYKVAANPQDARVEPDGRIDWSRGKLGISDYDPAAIQVAREAADVSGTELVGVSV GTVAATAAKEKKNVLARGLDRVMTLGDDKTSEWSSVQVAGALAALIQRIGGVTLVVTGDA SVDEGAQLMPALVGARLGLPTFLEVTHVEPSGTGWQITQNYDGGSRVVRTDGAAVIATTP DATTPKAPGMKDILKAAKKPMEDVKCSELDLSRATVNVVSRGPAPVKERKHQVFSGDGAA AQLVAALRDASVI >gi|302034499|gb|GL383252.1| GENE 62 57039 - 57917 432 292 aa, chain + ## HITS:1 COG:STM1353 KEGG:ns NR:ns ## COG: STM1353 COG2025 # Protein_GI_number: 16764704 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, alpha subunit # Organism: Salmonella typhimurium LT2 # 41 292 48 311 311 154 36.0 3e-37 MSTSWIVTAQPNISHMLELTGQRGDSTVVVAVGVAADRFSGADRVVQIELPAAVPVEAVA GFAAEQVAAEPGDVVLAGTSSADRVLAAAVAVQLDAPIYRGLQELEAGKATVLQLGGVLE QTLSLSTPIVFVCEPGGPSEGPCPELTQVSATVDGATVVSSDKAGSQATNLAAAKRIVAC GRGFREEADLHIAHDLAAQLGAELACSRPLAEGVSWFEKKLYVGISGAQVSPELYIAVGI SGQLQHVVGMNKSQTVVAINSDSDAPIFEQADYGIVGDLYAVLPELTKALAR >gi|302034499|gb|GL383252.1| GENE 63 57914 - 59284 175 456 aa, chain + ## HITS:1 COG:ydiS KEGG:ns NR:ns ## COG: ydiS COG0644 # Protein_GI_number: 16129655 # Func_class: C Energy production and conversion # Function: Dehydrogenases (flavoproteins) # Organism: Escherichia coli K12 # 32 425 6 400 429 331 46.0 2e-90 MTGIAELLRGVGSQPSETPPPLWDVPGVEPDFDVIVVGGGVAGAVAAYELAGEGHEVLLV ERGREPGSKNLSGGVLYCRVLEEIFPNFLRDAPVERKIIRNQLMFLNRDSSVAVDYRDAR LVDPVNAVTVLRAKLDPWLSEKCEEAGVTVMSGVRVDSLIERDGQFVGVRAGDDELYSRV VIAADGVNSFLSRDAGLRGPEPKNNLAVGVKSVIGLDPKVIEERFQVKNGEGAAYAVVGD CTKGVGGGGFLYTNIDSVSAGIVLRLDDLERSGESSSQLHDHFLTHPVVAPLLAGGELLE YGCHLVAEGGASMQHDLVAPGLLIVGDAAGFTLNTGFTVRGMDLAAGSALAAAKSVDLAL RNHDVGHGTLDGYISTCNESFVGRDMNTYRNAPAFLESPEMYDDVGQLAADVMYKIYGLD MTPRKHLLPTVASAVRSSNLSFSQIASIGFRAMRAL >gi|302034499|gb|GL383252.1| GENE 64 59284 - 59586 95 100 aa, chain + ## HITS:1 COG:ECs0047 KEGG:ns NR:ns ## COG: ECs0047 COG2440 # Protein_GI_number: 15829301 # Func_class: C Energy production and conversion # Function: Ferredoxin-like protein # Organism: Escherichia coli O157:H7 # 10 100 6 95 95 78 41.0 3e-15 MTAKSDGFGSVACRLAKNHYDVDEDNSHIHVNQDIARGTGTGKLLVRVCPAHVYSEESDG TISVEYAACLECGTCLAVAAPGSLEWHYPAGAMGISFREG >gi|302034499|gb|GL383252.1| GENE 65 59643 - 61127 1000 494 aa, chain + ## HITS:1 COG:PA5099 KEGG:ns NR:ns ## COG: PA5099 COG1457 # Protein_GI_number: 15600292 # Func_class: F Nucleotide transport and metabolism # Function: Purine-cytosine permease and related proteins # Organism: Pseudomonas aeruginosa # 27 484 11 469 480 387 48.0 1e-107 MSAPNSAQDEIRHGNTAPTASGAGRGVEKRTIDMVPDDERHGAPKSQFTLWFGVNMQITA VVNGALAIVFGADVVWAIIGLFIGQVIGGAVMALHSAQGPALGLPQMISSRAQFGVYGAV LPLFLVLLLYFGFAATGTVLAGQAINNAFGVQSRWIGILVFAALTAIIAMFGYDLIHKLG KVSSTIGLLGLLYVAVRLFQVSSFGPQLTDVHFSVVPFLLSIALAAGWQLTYAPYASDYS RYLPRDTKFGSAWFGPFAGSVLGATISMTLGVFIAAAGGQAFIGDQVGFMGNLAQNRVLA ILVFISIVIGKLTINTLNAYGGVMALSTALSGFTGKSSVSPKTRFGFVIGFNVVVVLTAL AASSDFLQVFKSFILTLLMFFLPWSAINLLNYYLICRGCIDIPALYTPRGRYGKLHWPTI VVYLLGVVVQIPFISQAFYVGPVAAAMGGADISWLVGLVVTALVYFPLGRRAFDYPLEIV YPKDVELDPSIVSR Prediction of potential genes in microbial genomes Time: Thu Jul 21 05:29:53 2011 Seq name: gi|302034498|gb|GL383253.1| Propionibacterium acnes HL025PA2 genomic scaffold Scfld6, whole genome shotgun sequence Length of sequence - 27132 bp Number of predicted genes - 26, with homology - 22 Number of transcription units - 14, operones - 5 average op.length - 3.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 103 - 170 3.6 1 1 Tu 1 . - CDS 213 - 1736 880 ## HMPREF0675_4936 actinobacterial surface-anchored protein domain protein - Term 1907 - 1954 16.4 2 2 Op 1 58/0.000 - CDS 1975 - 5856 3655 ## COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit 3 2 Op 2 28/0.000 - CDS 6025 - 9504 880 ## PROTEIN SUPPORTED gi|163796927|ref|ZP_02190884.1| 30S ribosomal protein S12 - Prom 9624 - 9683 2.6 - Term 9554 - 9587 4.1 4 2 Op 3 47/0.000 - CDS 9802 - 10194 623 ## PROTEIN SUPPORTED gi|50843339|ref|YP_056566.1| 50S ribosomal protein L7/L12 5 2 Op 4 . - CDS 10208 - 10822 988 ## PROTEIN SUPPORTED gi|213961499|ref|ZP_03389777.1| 50S ribosomal protein L10 - Prom 11016 - 11075 2.9 6 3 Tu 1 . + CDS 10755 - 11039 76 ## + Term 11123 - 11170 -0.5 - Term 11197 - 11241 12.2 7 4 Op 1 55/0.000 - CDS 11251 - 11949 1163 ## PROTEIN SUPPORTED gi|213961485|ref|ZP_03389763.1| ribosomal protein L1 8 4 Op 2 45/0.000 - CDS 12039 - 12470 717 ## PROTEIN SUPPORTED gi|50843342|ref|YP_056569.1| 50S ribosomal protein L11 - Term 12562 - 12591 -0.8 9 4 Op 3 . - CDS 12600 - 13511 1037 ## COG0250 Transcription antiterminator 10 4 Op 4 . - CDS 13535 - 14185 614 ## HMPREF0675_4944 preprotein translocase, SecE subunit - Prom 14379 - 14438 3.8 - TRNA 14276 - 14351 76.2 # Trp CCA 0 0 - Term 14550 - 14600 10.9 11 5 Tu 1 . - CDS 14635 - 15900 1141 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 12 6 Tu 1 . + CDS 15829 - 16047 81 ## - Term 15924 - 15983 5.9 13 7 Op 1 . - CDS 16004 - 17134 725 ## COG0812 UDP-N-acetylmuramate dehydrogenase 14 7 Op 2 . - CDS 17131 - 17547 375 ## COG2030 Acyl dehydratase 15 7 Op 3 . - CDS 17544 - 17972 323 ## HMPREF0675_4949 hypothetical protein - Term 18025 - 18076 7.0 16 8 Tu 1 . - CDS 18102 - 18272 309 ## PROTEIN SUPPORTED gi|50843349|ref|YP_056576.1| 50S ribosomal protein L33 - TRNA 18328 - 18402 79.6 # Met CAT 0 0 - TRNA 18468 - 18540 73.0 # Thr GGT 0 0 17 9 Tu 1 . + CDS 18546 - 18851 98 ## - TRNA 18743 - 18824 53.9 # Tyr GTA 0 0 - Term 18696 - 18740 7.4 18 10 Tu 1 . - CDS 18787 - 19017 69 ## 19 11 Tu 1 . + CDS 18995 - 19888 779 ## COG0708 Exonuclease III - Term 19615 - 19656 -0.8 20 12 Tu 1 . - CDS 19890 - 20825 576 ## COG1024 Enoyl-CoA hydratase/carnithine racemase 21 13 Op 1 . - CDS 20922 - 22502 950 ## HMPREF0675_4956 hypothetical protein 22 13 Op 2 . - CDS 22499 - 22807 201 ## HMPREF0675_4957 4Fe-4S binding domain protein 23 13 Op 3 . - CDS 22804 - 23388 271 ## HMPREF0675_4958 respiratory-chain NADH dehydrogenase, 30 Kd subunit 24 13 Op 4 . - CDS 23385 - 23783 266 ## COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases 25 14 Op 1 23/0.000 + CDS 23981 - 25903 1749 ## COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit 26 14 Op 2 . + CDS 25905 - 26990 860 ## COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit Predicted protein(s) >gi|302034498|gb|GL383253.1| GENE 1 213 - 1736 880 507 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4936 NR:ns ## KEGG: HMPREF0675_4936 # Name: not_defined # Def: actinobacterial surface-anchored protein domain protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 507 1 507 507 1003 100.0 0 MQTKKNLRRPVLLAVLMTVIASLFAPMSWATDAKVVLSKNHTDAFYITTDSGVPVVKVAN GLHSRMYEPNEVEFQIQSDTYGRQYRLTGLSESLLEGYYTGSENTAEWFEPGWNAPGFTK NGFDALRVDFTSITGPGKMYLVGNSPEADENGKLGTFLAGDTYQVVKGASLPIKGHQHAH WFFTRAGKYTMSGVAVGKKIDGKEVSSQPFTLSWEVLKSDDDKRPGASDDSDEPSAEPLR DPSEEPSSAPHDAATPKIDDTKVEITQGHLDVFAGIARNRKLSMVIKDDRSGQAIYRAPE AVTLRVGENAYRKLPQSMHDRFAPEGYLLAQNGDNQQEVLFPGWDTYGVAPDFGAVDLEF VDVKGPGKVYMFMQGIGKLRSPLASGSWVLASGEFISQKKPGHVHTNWLFGKPGTYTMKV RLRGVPVKVIDGKAVVSEPVRYTWVVGGRSGSQSSAVVSARQLVKRVDEKTAPEPFTPMP TMDSGAVSRDATRTPQLTITGLPQTGI >gi|302034498|gb|GL383253.1| GENE 2 1975 - 5856 3655 1293 aa, chain - ## HITS:1 COG:ML1890 KEGG:ns NR:ns ## COG: ML1890 COG0086 # Protein_GI_number: 15828009 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, beta' subunit/160 kD subunit # Organism: Mycobacterium leprae # 1 1291 1 1314 1316 1745 66.0 0 MLDTNYYDRLQIGLATADQIRAWSHGEVKKPETINYRTLKPERDGLFCEKIFGPTRDWEC YCGKYKRVRFKGIICERCGVEVTRSNVRRERMGHIELVAPVTHIWYFKGVPSRLGYLLDI APKDLEKVIYFAAYMITAVDDEARHRDLPSLEAKVQTERSRLEQRRDSELEARRVKLEED MAQLEADGAKADVRRKVKDGAEKELKHIETRAQRQIDRLDAVWDRFKNLKVQDLEGDEIL YREMKSRFGKYFEGSMGAEAVKRRLHDFDLKSESEKLREIIKTGRGQKKTRALKRLKVVQ AFLDSGNSPEAMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLVDL GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVSGPGNRPLKSLSDMLKGKQGRFRQNLLGK RVDYSGRSVIVVGPQLKMHQCGLPKTMALELFKPFVMKRLADLEHAQNVKSAKRMVERQR PVVWDVLEEVIKEHPVLLNRAPTLHRLGIQAFEPQLIEGKAIQLHPLVCSAFNADFDGDQ MAVHLPLSPEAQAEARVLMLSTNNILKPADGRPVALPSHEMIIGAYYLTMALDGLKGEGR AFTSLAEAIMAHDLGELEIGAKIKLRLKGIVPPHDETVRADGSVILDTTLGQALFNEVLP DDYPYVDFLVGKKQIGKIVNDLSERMTQLEVAHVLDNLKDIGYKWGSLSGVTVSIGDVQT PPTKPEILAGYETRAAKVDREYDRGAVTEEERRQDLIQIWTEATAELTAAMEANFTQTNP IHMMVDSGARGSMTQMRQIAAMRGLVADPKGDIIPRPIKSNFREGLTVLEYFISTHGGRK GQADTALRTADSGYLTRRLVDVSQDVIVRENDCGTTRGMPKTIAVDDGNGNLVRVEGLDT AVYARCLAADAVDANGNVVVEANSDLGDEEISRLIAAGISQIKVRSVLTCTAAQGCCARC YGRSLSTGHLVDVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRVVELFEA RSPKGKSPLAEAAGVIRIDESDNRRKLVLVRDDGEDDVEYVVPRRARLEFDLDGTHRVIR DGVRVAAGEQLMGGTADPQDVLRISGVRRVQEYLVKEVQKVYNTQGAGIHEKHIEIVIRQ MLRRITVIESGDTQMMPGELVDRGAYEAANRKAVAEGGRPAEGRPVLMGITKASLATESW LSAASFQETTKVLTDAAINGKTDTLVGLKENVILGKLIPAGTGLEVYRNMRVEPTAEAKA AAFTMNYDPFDYDFGSGSGEAVPLDDLDLGDLG >gi|302034498|gb|GL383253.1| GENE 3 6025 - 9504 880 1159 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163796927|ref|ZP_02190884.1| 30S ribosomal protein S12 [alpha proteobacterium BAL199] # 842 1126 1085 1390 1392 343 59 7e-94 MAATRTASKNTSAISPQSGRISFAKIHEPLEVPNLLDLQVESFNWLVGNEIWQSRVDAAL AEGRTDINTKSGLEEIFEEISPIEDYSQTMSLSFRDHRFEDPKHSVDECKDRDTTYAAPL FVTAEFMNNETEEIKSQTVFIGDFPLMTSKGTFIINGTERVVVSQLVRSPGVYFEKTADK TSDKDIFTCKVIPSRGAWLEFEIDKRDTVGVRLDRKRKQNVTVFLKALGWTADRILEEFG THESIRQTLEKDHGVETQDQALLDIYKKLRPGEPPSRDAAQQLLENYYFNPKRYDLAKVG RYKINKKLGLSLPFDQQVLTVDDIVAAIHFVCALHEGTAILPREGQDDIVVEPDDIDHFG NRRLRTVGELIQNQLRTGLSRMERVVRDRMTTQDIEAITPQTLINIRPVTAAIKEFFGTS QLSQFMDQNNPLAEMTHKRRLSALGPGGLSRDRAGMEVRDVHPSHYGRMCPIETPEGPNI GLIGSLASFARVNAFGFIETPYRKVVDGHVTDEVVYLTADEEDRHVIAQANAKLDDDGHF ANDRVLVRQRHGEADEVPSSEVDYMDVSPRQMVSVASALIPFLEHDDASRALMGANMQRQ AVPLVRTEAPFVGTGMEYRCAVDVGDVTLAEKAGSVLSVSADLIDIACDDGTYQTYKLEK FRRSNAGTCINQRPLVKVGQRVEVGTPLADGPSTDNGELALGRNMLAAFMPWQGLNYEDA IILSQRIVSDDVLTSIHIEEHEVDARDTKLGAEEITRDIPNVSEDMLANLDENGIVRIGA EVGTGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGEEGTVIGVRIFD TENGDELAPGVNQMVRVYVAQKRKISIGDKLAGRHGNKGVISKILPVEDMPFLPDGTPVD IILNPLGVPSRMNVGQVLEMHLGWIAHSGWDITQAEGDWAERLREVGLIDIPEESRLATP VFDGATEQEITGLLQYGHPTRDGEMLVDTDGKATLFDGRTGEPFPSKVGVGYMYMLKLHH LVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWAMEAYGAAWALQELLTIKSDD VPGRVKVYEAIVKGENIPEPGIPESFKVLVKEMKSLCLNVEVLNSEGQEIDLRGSEEDTR SGLGIDIGRRPGADNAMAD >gi|302034498|gb|GL383253.1| GENE 4 9802 - 10194 623 130 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|50843339|ref|YP_056566.1| 50S ribosomal protein L7/L12 [Propionibacterium acnes KPA171202] # 1 130 1 130 130 244 100 4e-64 MAKLSNEELLDAFKEMTLIELSEFVKQFEETFDVSAAAPVAVAAAGAPAAGGEAAPAEEE KDEFDVILESAGDKKIQVIKEVRGLTSLGLKDAKDLVESAPKPVLEKAKKEDAEKAKEAL EAAGATVTLK >gi|302034498|gb|GL383253.1| GENE 5 10208 - 10822 988 204 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|213961499|ref|ZP_03389777.1| 50S ribosomal protein L10 [Propionibacterium acnes SK137] # 1 204 1 204 204 385 100 1e-106 MARPDKVAAVAELKEKFSSAGATVLTEYRGLSVSALKDLRRSLGSDATYAVAKNTLTRIA AKEAGIEGLDDQLVGPTALAFINGDVASVAKGLKNFAKDNPLLVIKGGVMDGNVLDADQV KKLADLESREVLLAKLAGGLKANLTKAAVVFNALPSKAARGLGALQEKAAAEPSVIGGAG EASDQEPKTTETPEASAAQDNTNE >gi|302034498|gb|GL383253.1| GENE 6 10755 - 11039 76 94 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAPAEENFSFSSATAATLSGLAIGSPSHFSYVALAVWTASAGAVGRTKRNPGAQAHDGVI NHLGVHLRGPSIAPDAWRETPTSGLRQLIQNSWL >gi|302034498|gb|GL383253.1| GENE 7 11251 - 11949 1163 232 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|213961485|ref|ZP_03389763.1| ribosomal protein L1 [Propionibacterium acnes SK137] # 1 232 1 232 232 452 100 1e-126 MKRSKAYRAAAEKVNLDQLYSPEEALALVASGASAKFDETVDVAIRLGVDPKKADQMVRG TVNLPHGTGKTARVLVFATGEKAEAAREAGADEVGDDDLIAKVQGGYLDFDSVVATPDMM GKVGRLGRVLGPRGLMPNPKTGTVTMDVAKAVSDIKGGKIEFRTDRYANLHFLIGKVSFG SEKLAENYFAALDEILRLKPNAAKGRYLRKITVSSTMGPGVQIDPVAARDAD >gi|302034498|gb|GL383253.1| GENE 8 12039 - 12470 717 143 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|50843342|ref|YP_056569.1| 50S ribosomal protein L11 [Propionibacterium acnes KPA171202] # 1 143 1 143 143 280 99 5e-75 MPAKKKVAAVVKVAPQAGQATPAPPVGMALGPHGVNIMEFCKAYNAQTEGQRGNIVPVEI TIYEDRTFSFVLKTPPAAELIKKAAGIKKGTENPATHKVGKISKDQVREIAETKMPDLNA NDIEAAMNIVAGTARSMGVEVEV >gi|302034498|gb|GL383253.1| GENE 9 12600 - 13511 1037 303 aa, chain - ## HITS:1 COG:ML1906 KEGG:ns NR:ns ## COG: ML1906 COG0250 # Protein_GI_number: 15828020 # Func_class: K Transcription # Function: Transcription antiterminator # Organism: Mycobacterium leprae # 107 303 28 228 228 210 54.0 3e-54 MSDSPHFSETNDVEINLDALTPDTAEEKDDEVEIDLGDLSEEDSAEEPEIDLDLGDDEPA EASDDDIARNLGIGQAADDEQDADENESSEADNADNQDVVDAAIEELRGELSSKFGEWYV LHTYSGMENKVKQNLDARVQNFNMEDYIFETVVPTEEVVEIRNGARRTITRVYLPGYVLV RMDLTDDSWGIVRHTPSVTGFVGQSTTPIPLTFDEVVKMLTPSVVARISRENADKTSSPK AKPKVEVADYEVGESVQITDGPFAGVPAQITEINTNNQRIKALVEILGRSTPVDLEFNQI EKI >gi|302034498|gb|GL383253.1| GENE 10 13535 - 14185 614 216 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4944 NR:ns ## KEGG: HMPREF0675_4944 # Name: secE # Def: preprotein translocase, SecE subunit # Organism: P.acnes_SK137 # Pathway: not_defined # 1 216 1 216 216 333 100.0 3e-90 MTDEKRNLSDGDDPSVKGELSPRGEDLASNNLPETDEYDVVDPEAEELTTPDDVVDKTPD KADPEDMVIDDPDQLEGAEEVAASARSSRPVRKKDSAGKPARRGKPVRKEASAADEEPAT ASAAKSAGPEPKRKLTKAPVRKERSHHKPADQGKQRIGPVTFTKQSVAELRKVKWPSGDE LGQYFLVVLVFVLLIIAYVSGLDVVFGWVVIKLFGH >gi|302034498|gb|GL383253.1| GENE 11 14635 - 15900 1141 421 aa, chain - ## HITS:1 COG:ML2336 KEGG:ns NR:ns ## COG: ML2336 COG1167 # Protein_GI_number: 15828259 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Mycobacterium leprae # 4 419 36 459 463 446 54.0 1e-125 MTTPLIDLSHDDLSALHQQLSSEHADLVARGVCLNITRGKPSPAQLDLNADLLTIDVSSH AEDGRDVRNYGGNRGLPEIRRIFGELLGVDVDHIIAADNSSLSIMHDLAMFAFVHGIAGQ KPWSGQNVKFIAPVPGYDRHFAICEHLGIDMIPVELGEHGPDVDEVAKLAADPLVKGMWV VPMYANPNGAIYDERTVRALVSMPTAPDFRIWWDNAYALHHLTDTEHPALPVLQWAEEAG NPDRVFELASTSKITFAGDGVSFLASSKANLDWYLGHAAVRSIGPDKVNQLRHAQYLRDA EGVRKLMRAHREILAPKFAVVNEVLTHRLGGRGVASWTHPTGGYFITLDVMDGTASRVVA LAKEAGIALTPAGASHPLHRDPHDRTIRLAPSFPGMDELRAAMEGVSTCVLLAASEKLLK G >gi|302034498|gb|GL383253.1| GENE 12 15829 - 16047 81 72 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLAAQLLMQGGQVIVGQVNQRGGHAPNSVPSPVQDNTRPSSPAAVRLEGSWRLAMLGRVR SCSRSSAARAPR >gi|302034498|gb|GL383253.1| GENE 13 16004 - 17134 725 376 aa, chain - ## HITS:1 COG:MT0500 KEGG:ns NR:ns ## COG: MT0500 COG0812 # Protein_GI_number: 15839872 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate dehydrogenase # Organism: Mycobacterium tuberculosis CDC1551 # 35 376 16 369 369 289 50.0 5e-78 MSTTVIGPYEDDDPTEACSTIHHEVIGTTTCLSGGEDVPLAPLTTLKVGGPARHLVIATT HDELLATVRDCDRRGEPCLVLGGGSNVLVGDNGFDGTVVRVATSGLSAEVSSCGGALVTV AAGQVWDDFVVHAIEQEWIGPEFLSGIPGLVGSTPIQNVGAYGVEVGEFIARVRTWDRVD DTQRTFTADQCDFGYRSSRFKAEPDRYVVLDVTMQFNLGTRSLPVRYAELARRLGVEPGE RVDTSQVRETVLAVRAGKGMVLNPNDHDTWSAGSFFTNPLVSPDQVPEGAPAFAQSDGRV KTSAAWLIDHAGYGKGFKVAEDAPASLSTKHVLALTNRGGASSGDFTTLARTVIDGVRDV YGITLVPEPRLIGCTI >gi|302034498|gb|GL383253.1| GENE 14 17131 - 17547 375 138 aa, chain - ## HITS:1 COG:ML1909 KEGG:ns NR:ns ## COG: ML1909 COG2030 # Protein_GI_number: 15828023 # Func_class: I Lipid transport and metabolism # Function: Acyl dehydratase # Organism: Mycobacterium leprae # 18 128 22 134 142 85 41.0 2e-17 MSVQLSEGQTFGPRAINVTRTTLVRYAGASGDFNPIHYSDRAAREAGMDGVIAHGMWTMG AALGTVIDWVGGPERVVSQRARFTRPVQVPDTEGGTAIEVAATVRKVSEEAATLAVDVKC DGQSVLGRVEVVVRQGEQ >gi|302034498|gb|GL383253.1| GENE 15 17544 - 17972 323 142 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4949 NR:ns ## KEGG: HMPREF0675_4949 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 142 1 142 142 271 100.0 9e-72 MSISSHDVGRTYPTTDPYLVTAEKIRELATALGDNAPAYRGDDPIAPPTFAMVLASRAWE ALFDDEQLDLRLEHMIHTDQSFHWIRPLHEGDEVTAALTITSVRTRGNTDIIGINVSLDH VDGEHLGNATSTLWHTRPEGNA >gi|302034498|gb|GL383253.1| GENE 16 18102 - 18272 309 56 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|50843349|ref|YP_056576.1| 50S ribosomal protein L33 [Propionibacterium acnes KPA171202] # 1 56 1 56 56 123 100 1e-27 MAKKSGDVRPKITLACTECKERNYITKKNRRNNPDRMEMAKFCPRCRKHTAHRETR >gi|302034498|gb|GL383253.1| GENE 17 18546 - 18851 98 101 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRKLHELSTVGKSEPESPQPPGLNPETGFQSNRAVPPHHISNRPMSARDPVMAKPTPESI RPGGLRGRCWIRTNVGETDGFTDRSLWPLGQPAVLALTSDR >gi|302034498|gb|GL383253.1| GENE 18 18787 - 19017 69 76 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLKLAMRICRSVSHAEYGGGCPGRSRATGDVSGGGWYECGLIHIPIGHDCGLPANIIDRW LTPARQVARVAKGSGL >gi|302034498|gb|GL383253.1| GENE 19 18995 - 19888 779 297 aa, chain + ## HITS:1 COG:NMA0348 KEGG:ns NR:ns ## COG: NMA0348 COG0708 # Protein_GI_number: 15793359 # Func_class: L Replication, recombination and repair # Function: Exonuclease III # Organism: Neisseria meningitidis Z2491 # 1 296 2 255 259 187 37.0 1e-47 MRIASFNINGIRAALKRGFSERMEARDCDVIGLQEVRCRPADLPEGAFGDRHVSWAPGSL AGRNGVALLTRTAPAEVRSWGTHLVMAPGQAPTPAQALTGNTDGLPTELLPFADEGRYIE VDLADTPLTVACLYLPKGATPDPANEKTIAKQDRKMAFLTGFRDHLVRRRQECTTQGRHF LVMGDFNIAHENADLKNWKANQRNEGFLPEERQWFDTILSPDTLIDVVRAQHPDTNGPYS WWSWRGKAFVNDAGWRIDYHLASPELASKAITAEIDRDPSYSERTSDHAAVVVDYDL >gi|302034498|gb|GL383253.1| GENE 20 19890 - 20825 576 311 aa, chain - ## HITS:1 COG:ML2401 KEGG:ns NR:ns ## COG: ML2401 COG1024 # Protein_GI_number: 15828291 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Mycobacterium leprae # 14 310 19 338 345 142 34.0 7e-34 MDEVKISGTDDVTIILDRPRAINSLSGEMLGAIGEAVKGSPRSIDLSGAGERGYCSGADI RELRSLVLKDPEAAGDWLDGEYDVDAAIAEVHSGTAHLHGISMGGGLGLALRLKRVEARD DLVLAMPETGIGLWPDVGACFELSRAPRLVGRHIAMTGAFIDAASALWAGLVDEVVDADG EPVDVDPVACQLARDAVWIQECYDTDDPVEVCRRLADRPEPAARKTAEHIATRCPLSVAV ALAAVVRAESASGLGEVLETDRALGRSFMRNSDFCEGVRAQLVDKDRNPHWSHESVADVP ARQVEGMFDPS >gi|302034498|gb|GL383253.1| GENE 21 20922 - 22502 950 526 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4956 NR:ns ## KEGG: HMPREF0675_4956 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 526 1 526 526 919 99.0 0 MKQPVGRRRRIRWLAYVRAWRSWSVLEGLVGTILITAGSLTPAYLPLNSPWWSRLNEAGL RGSTWRIVGTLLVLVGVGLLVDSWLRLRPGREPRDLTAEPLPKHARRCFKHLPGIRAGLH PWAVLGVWGLPFLLAPPIFSHDAYSYAAQGWLLENGISPYEGYPGLLPGAFADQVAQEWR YTKTPYGPLALVVQHGIVHLTGDNPYWSSVFMRVPALLGVIAIGLLLSRVARRVGRDPHF AAWFSTLNPILVVDFIGGAHNDALMMGLVVIGLWIACMTSWSWAIGAVLVGGAAAVKQPA FMVAVALPLIRHPMASWHPRHLFPALGRTVGSLTISVAVFSGISWASGLGFGWYHAVNVP GMVLTVSPFTLVGMGVRMVLGSFGAHQAAAAVIPISQAIGMLVGVFLLVVMAVRLLPCKP LSFLALGFLAVALCAPALHSWYVLWGALLLPLIDEAARFVRPAVWTTVIMLSFDAVNLSW RNSAAALGVALVLVLAARLVWHEHSLGQGWTHKDVHVPHPTRSIDC >gi|302034498|gb|GL383253.1| GENE 22 22499 - 22807 201 102 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4957 NR:ns ## KEGG: HMPREF0675_4957 # Name: not_defined # Def: 4Fe-4S binding domain protein # Organism: P.acnes_SK137 # Pathway: Oxidative phosphorylation [PATH:pak00190]; Metabolic pathways [PATH:pak01100] # 1 102 1 102 102 181 100.0 1e-44 MRHSAINLDVDACTSCMICARECPAWCITIDAHHEAVPDCDARRPRTVAVLDEFAIDWGL CMYCGMCIESCPFDALSWSDKRVSESLSRTDLVSAWGLDGDR >gi|302034498|gb|GL383253.1| GENE 23 22804 - 23388 271 194 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4958 NR:ns ## KEGG: HMPREF0675_4958 # Name: not_defined # Def: respiratory-chain NADH dehydrogenase, 30 Kd subunit # Organism: P.acnes_SK137 # Pathway: Oxidative phosphorylation [PATH:pak00190]; Metabolic pathways [PATH:pak01100] # 1 194 1 194 194 346 100.0 4e-94 MTTSDVPAIGWHDAVAQAVSTHPWLAHLTAIDGTGERGQDPDIIVVCRLENHDGDDVTIS TRVPRDGGTLDSIVGVLAGASWYQREIHDFFGVRFVGPGADDRALLVHDAPKPPLRKEAV LAQRADTVWPGAADQAGSKSASRRLPVGVPDPETWRRIKDGEDIPDAEVIAAMSGRRPRS AARRMASTASGRQA >gi|302034498|gb|GL383253.1| GENE 24 23385 - 23783 266 132 aa, chain - ## HITS:1 COG:Ta0969m KEGG:ns NR:ns ## COG: Ta0969m COG0377 # Protein_GI_number: 16082574 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases # Organism: Thermoplasma acidophilum # 4 122 20 141 157 69 34.0 1e-12 MKFIDWFADGSVYVVDLALACCGVESGAAVLANAPVREEIPDGAPIVVLVSGTVTTGLAP VVSDTVHELKRNHPVDVVAFGACACAGGPYWDSAGVVAGLPDAGVDADHWIPGCPPGPET LTGLLASSREAA >gi|302034498|gb|GL383253.1| GENE 25 23981 - 25903 1749 640 aa, chain + ## HITS:1 COG:MT2530_2 KEGG:ns NR:ns ## COG: MT2530_2 COG0674 # Protein_GI_number: 15841979 # Func_class: C Energy production and conversion # Function: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit # Organism: Mycobacterium tuberculosis CDC1551 # 222 626 1 391 425 464 60.0 1e-130 MPSTDTAHHTTDEREVQPLDRVVIRFAGDSGDGMQLTGDRFTAESAIHGNDISTLPNFPA EIRAPQGTIPGVSSFQVHFANYDIATPGDQPDVLVVMNPAALAANLGDIRRGGLIILDSA EFTAKNLKKAGYTEDPRNDGTLESYQVVELNLTGLAVAAVEPFNLGRKNSERAKNMFALG LLTWLYGRPLGPSEKFLASKFASKPDIRDANFAALKAGHAYGETCELFRVRYEVAPAPMP EGTYRQVTGNLATAYGLITGANRAGLQLFLGSYPITPASDILHELSKRKAHNVVTFQAED EIAGVSSAIGASFSGSLGVTTTSGPGMSLKSEAIGLAVMTELPLVVVDVQRAGPSTGMPT KPEQADLLQAMFGRNGESPVPVLAAKSPSDCFDTALEACRIAVTYRTPVIMLSDGYLGNG AEPWKVPDLAEIPRIDPHFATEPNTTAADGSPRFMPYRRDPQTLARPWALPGTKGLEHRV GGLEKSAHTGAISYDPANHEEMVATRAAKVKGIAKTIPPTAVDDPSGDADVLVLGWGSAY GPITAAVRRVRARGLSIAQAHVRHLNPLPEDLGDVLRRYRQIVVPEMNTGQFAMLLRSKY LIDVKTISRVRGLPISPVDLCDELCRHCGDSKGSDDTREA >gi|302034498|gb|GL383253.1| GENE 26 25905 - 26990 860 361 aa, chain + ## HITS:1 COG:Rv2454c KEGG:ns NR:ns ## COG: Rv2454c COG1013 # Protein_GI_number: 15609591 # Func_class: C Energy production and conversion # Function: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit # Organism: Mycobacterium tuberculosis H37Rv # 14 359 33 372 373 419 60.0 1e-117 MTDITTEDRPAGLADVPLAIEPLKRRDFASDQEVRWCPGCGDYAILSTFQGVLPNLGIAK ENAVVISGIGCSSRFPYYMNTYGMHSIHGRAPAIATGVAVSRPDLAVFVITGDGDALSIG GNHLIHAMRRNVNLTILMFNNRIYGLTKGQYSPTSEAGKVTKSSPMGSIDAPFNPLAVAL GAGCSFVARAVDSDRKHLAQVLTAAAKHRGTSFVEMYQNCPIFNDGAFDDYKGPEATQHL IRLVDGEPVLVGADNSRGVVRDPVSGELTVADVAEVGMDHVLVHDSHRADPSLAFELAHL DDGTVVTQTPVGIFYDVDRPTYDDQARAQVKLASGDATDPGSRNAALQQLLLGSDTWQVQ S Prediction of potential genes in microbial genomes Time: Thu Jul 21 05:30:51 2011 Seq name: gi|302034497|gb|GL383254.1| Propionibacterium acnes HL025PA2 genomic scaffold Scfld7, whole genome shotgun sequence Length of sequence - 3435 bp Number of predicted genes - 4, with homology - 4 Number of transcription units - 2, operones - 2 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 3 - 1530 1071 ## COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit 2 1 Op 2 . - CDS 1566 - 1832 137 ## PPA1718 hypothetical protein - Prom 1940 - 1999 1.9 3 2 Op 1 . + CDS 1785 - 2297 306 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 4 2 Op 2 . + CDS 2294 - 3292 719 ## COG0598 Mg2+ and Co2+ transporters Predicted protein(s) >gi|302034497|gb|GL383254.1| GENE 1 3 - 1530 1071 509 aa, chain - ## HITS:1 COG:Cgl0680 KEGG:ns NR:ns ## COG: Cgl0680 COG4770 # Protein_GI_number: 19551930 # Func_class: I Lipid transport and metabolism # Function: Acetyl/propionyl-CoA carboxylase, alpha subunit # Organism: Corynebacterium glutamicum # 3 490 6 496 591 609 62.0 1e-174 MDRTIKRVLVANRGEIAVRIIRAAKDVGITSVAVYADSDSEGLFVKLADEAFALNGVTPA QTYLDVDKILDVARRAEVDAIHPGYGFLSENADFAQAVIDAGFLWIGPPPHAIRVLGDKV QARHIAQKVGAPLVPGTADPVDDPEEVVQFAKEHGLPLAIKAAFGGGGRGLKVAHSMDDI TPLYESAVREAVTAFGRGECFVERYLDKPRHVETQCIADHYGTVQIISTRDCSLQRRHQK LVEEAPAPFLSDEQLTRLYESSRAILKEAEYVGAATCEFLVGQDGTISFLEVNTRLQVEH PVSEEVAGVDLVQMMFHVAQGGHLTPEDPQLRGHSFEFRINAEDPGMGFMPASGTLTSWQ PPYGPGVRMDEGYHSGMTVPGAFDSLIGKLIITGDSREQALARAARALDEIVIDGMPTVI PFHQAVVHDPAFTAADGCFGVFTDWIETEFDNKIEPYTGSLGESANSEPPREVVVEVNGK RVEVRIPASLHGARQVPSTKSHRPTRRNR >gi|302034497|gb|GL383254.1| GENE 2 1566 - 1832 137 88 aa, chain - ## HITS:1 COG:no KEGG:PPA1718 NR:ns ## KEGG: PPA1718 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 4 88 1 85 85 159 97.0 3e-38 MTNMTSQVQDELWCRHDGQASGLARRLRLPTTTTPPIYGKASQQDSHCHPCNQNEIFQGS HINVATRWRGEEEMDNDHATYVNPLDSP >gi|302034497|gb|GL383254.1| GENE 3 1785 - 2297 306 170 aa, chain + ## HITS:1 COG:Cgl2168 KEGG:ns NR:ns ## COG: Cgl2168 COG0494 # Protein_GI_number: 19553418 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Corynebacterium glutamicum # 1 149 1 157 178 113 44.0 1e-25 MATPQFILDLRRHIGHAPLWLAGSSAVVVRDGPRGPQVLLVQRADDGQWTPVCGIIEPGE RPDEAILREIHEETGVVAEVVRLVRVNVAAPVTYPNGDQCQFLDHDFLCRWVSGEPMVDD DESSHTGFFSIDQLPPMVPRHRRRIETALNPADTVIMSSDMVSPDIQEVR >gi|302034497|gb|GL383254.1| GENE 4 2294 - 3292 719 332 aa, chain + ## HITS:1 COG:RSp0665 KEGG:ns NR:ns ## COG: RSp0665 COG0598 # Protein_GI_number: 17548886 # Func_class: P Inorganic ion transport and metabolism # Function: Mg2+ and Co2+ transporters # Organism: Ralstonia solanacearum # 23 332 21 323 323 134 27.0 2e-31 MSLSQFSSRVWQYGKVIAESVPLETLNEELSDTRTLSWYDLTAPDREDIDILADELNLDF HTVEDAEAPGERPKVTRYPDHLFLTTYAATIGETDDPNSRLIVSRVSVWVFGHGVVSVHR NDLPEIAEVLNRLDANPDLVSNGPMGIVHAILDVLVDGHFDTVQHLDDVVEDVEDQLFDD SIDTQQVQLRVYRLRKELVQFRRIVLPMREIVSTICRPSREAVAVPRVLEPYFNDLYDHS MRVSEWSDSLRDLVATIFETNLSIQDAKLNIVMKKLAGWAAIIAVPTFVTGWFGQNVPFL GDGRPLGLWISAVLVVASSVLLYLVFRREDWI Prediction of potential genes in microbial genomes Time: Thu Jul 21 05:30:54 2011 Seq name: gi|302034496|gb|GL383255.1| Propionibacterium acnes HL025PA2 genomic scaffold Scfld8, whole genome shotgun sequence Length of sequence - 1193 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 41 - 1153 687 ## COG0686 Alanine dehydrogenase Predicted protein(s) >gi|302034496|gb|GL383255.1| GENE 1 41 - 1153 687 370 aa, chain - ## HITS:1 COG:Rv2780 KEGG:ns NR:ns ## COG: Rv2780 COG0686 # Protein_GI_number: 15609917 # Func_class: E Amino acid transport and metabolism # Function: Alanine dehydrogenase # Organism: Mycobacterium tuberculosis H37Rv # 1 370 1 370 371 409 60.0 1e-114 MRVGVPTEVKNSEFRVAVTPAGVHALVGRGHEVLVQAGAGVGSGIPDSDFVGAGARVVGD VESVWGDADLVLKVKEPVAEEYGRLHEGLVLFTYLHLAADEALTRELLGRGVTSIAYETV ELADHSLPLLSPMSEIAGRLAAQVGANCLLQSAGGRGVLFGGGSGVRRGRVSVLGGGVAG LCAARVAAGMGADVTVFDVDVARMRYIDEVWGGRIGTRFSSPLAVREACGESDVVIGSVL VPGARTPHLVDHEMVLGMVPGSVLVDVAVDQGGCFEDSHPTTHADPTFVVGGSVFYCVAN MPGAVPHTSTYALTNATMRYVLLLADEGWRGACGSRDDLRRGLATCGGKLVSAPVGEALG IECVPVSEVL Prediction of potential genes in microbial genomes Time: Thu Jul 21 05:30:59 2011 Seq name: gi|302034495|gb|GL383256.1| Propionibacterium acnes HL025PA2 genomic scaffold Scfld9, whole genome shotgun sequence Length of sequence - 15749 bp Number of predicted genes - 17, with homology - 16 Number of transcription units - 11, operones - 5 average op.length - 2.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 6/0.000 - CDS 68 - 3472 1604 ## COG0587 DNA polymerase III, alpha subunit 2 1 Op 2 . - CDS 3478 - 5070 954 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair 3 1 Op 3 . - CDS 5060 - 5656 310 ## HMPREF0675_4697 hypothetical protein - Prom 5742 - 5801 1.7 - Term 5694 - 5729 2.0 4 2 Tu 1 . - CDS 5873 - 6073 82 ## 5 3 Op 1 10/0.000 + CDS 5991 - 7145 734 ## COG0769 UDP-N-acetylmuramyl tripeptide synthase 6 3 Op 2 . + CDS 7142 - 7870 676 ## COG3442 Predicted glutamine amidotransferase + Term 8011 - 8055 13.2 + TRNA 7927 - 8002 78.8 # Lys CTT 0 0 7 4 Tu 1 35/0.000 + CDS 8260 - 9573 1431 ## COG1653 ABC-type sugar transport system, periplasmic component + Prom 9633 - 9692 80.3 8 5 Op 1 38/0.000 + CDS 9793 - 10833 1064 ## COG1175 ABC-type sugar transport systems, permease components 9 5 Op 2 . + CDS 10830 - 11711 992 ## COG0395 ABC-type sugar transport system, permease component + Term 11722 - 11774 18.0 10 6 Tu 1 . - CDS 11785 - 12351 626 ## HMPREF0675_4706 hypothetical protein - Prom 12465 - 12524 2.9 11 7 Tu 1 . + CDS 12435 - 12920 527 ## COG1225 Peroxiredoxin + TRNA 12971 - 13055 65.7 # Leu TAG 0 0 + Prom 12980 - 13039 80.4 12 8 Op 1 . + CDS 13286 - 13441 74 ## gi|315100762|gb|EFT72738.1| hypothetical protein HMPREF9592_00216 13 8 Op 2 . + CDS 13456 - 14334 399 ## COG3757 Lyzozyme M1 (1,4-beta-N-acetylmuramidase) - Term 14381 - 14428 -0.2 14 9 Op 1 . - CDS 14597 - 14812 56 ## gi|313831142|gb|EFS68856.1| conserved domain protein 15 9 Op 2 . - CDS 14727 - 15005 212 ## HMPREF0675_4710 hypothetical protein - Prom 15230 - 15289 4.2 16 10 Tu 1 . + CDS 15004 - 15450 180 ## gi|313814751|gb|EFS52465.1| hypothetical protein HMPREF9589_02455 - Term 15239 - 15274 3.3 17 11 Tu 1 . - CDS 15390 - 15647 225 ## PPA1663 protein associated to putative adhesion protein Predicted protein(s) >gi|302034495|gb|GL383256.1| GENE 1 68 - 3472 1604 1134 aa, chain - ## HITS:1 COG:MT3480 KEGG:ns NR:ns ## COG: MT3480 COG0587 # Protein_GI_number: 15842966 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit # Organism: Mycobacterium tuberculosis CDC1551 # 1 1134 8 1098 1098 975 51.0 0 MSYHNPPIPWRELEGRIFGRPAPHGHQESHADQVGYRHVRKPFDRHPVRPEGPVVPYAEL HCHSSYSFLDGASSPEDLVIRAVELGLSGLALTDHDGLYGVVRMAEAAEACGLSTIIGSE LSIGVPEPQNGVVDPMGSHLLVLANGPEGYRRLAEALTDAYLVEGGRKGRPVHDLDHLAE VADGHWTVLTGCRKGAVRQGLVRGMLQAEAELRRLVDLFGIDNVLVELTDHRAPTDSRDN DLLAELASRHSLLTVATTAAHYAGAEQFELACALSAVRARRSLDEMDGWLPPGPVARLRS GAEMADLFSRHRDAVDNTVSVAERTAFHLKSVRPRLPDQKVPDGHTPISWLRHLVEEGRR ACYGEDPVAKDRLATELNLIENRGFAGYFLIVSDIVEFAQSQGILCQGRGSAAASAVCYV LGITVVDPVFYGLPFERFLSVLREEEPDIDVDFDARRREEVIQYVYAKYGRRNAAQVADV ITYRPRSAVRDMAKALGYSQGQQDAWSRQMERRSVPPLPHDPDGSEIPDDVTTLAQQVMG LPRHLGIHSAGMVLTREPVGRICPIEPARMFGRTVLQWDKEDCAWMGLVKFDLLGLGMLS ALSISFDLISQHCGRFWTLASIPRNEPGVYDMLCRGDSIGVFQVESRAQIGALPRLKPRC FYDLAVEIGLIRPGPVQGGAVHPYIRRRTGAEPVTYPHPLLEPVLERTLGIPLFQEQLMQ MATTVGNCTAADADLLRRAMGSKRRVERIDSLCTKLFEGMAANGIDDDTAQGIYARIESF ANFGFAESHALSFAGLVYTSAWIKLHYPAVFLAALLRSQPMGFYSSATLVADARRHGVVT RRPDVARSSVGADLELLDACCEELGSEELETGIDECLHDHDESEIGAFDPNRDDGDHRRD THFAVRLGLSDVSGISIETATRIVEERERESFVSLDDLARRVDLSGEEVEALALAGAFDD LVGSRRGALWQIGQINGVAPGQLDVQVVTQPPLLPEPTQMELLGDDLRATSISTTDHPVR QVRDALNRRGVVQVDRLDGVEARRRIEVAGVVTHRQRPGTAGGVTFLNLEDETGLLNVIV TPGVWRHYRRVARASRALVVRGILERGNEGVMSLQADRLEALDLSVPTKSRDFR >gi|302034495|gb|GL383256.1| GENE 2 3478 - 5070 954 530 aa, chain - ## HITS:1 COG:Cgl0600 KEGG:ns NR:ns ## COG: Cgl0600 COG0389 # Protein_GI_number: 19551850 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Corynebacterium glutamicum # 19 527 6 526 526 159 29.0 2e-38 MLAERLSPFPVRVLLMVIPQWRIVAASRRHPGDAPLMIADRGVVIDCCARAAEEGVIPGL RVRAAQLRCPEGVVVPYDSASEEVLFDEVVREIEKSVAPSVHVVRPGVAAVAARGVARFY GDEVAAAERMVNVLTHIGYPHVGISVADGLFAAEVAATDSSGEGKRGPVFLASGTSRAFL APYDVSVLARTGRADGELVRTLRQLGLTTMGAFADLDRQHVVQRFADAGQRAHDWARGMD VTMLSSRRPQDDDAMEVVFDDPEPSGAQVVAKVRPVVEEFMTRLAETGRVCSQARILLRA TTGFSEHTWRQPWQFSGDDLLGRLSRQLNDLPRVIDEFGADEFCQSGVQAVRIVPTIHRA GEAAEGLFGARPTEHLVHVISQLQERLGPEGVLVGEVAGGRMLKDRRRLVPFGTVVENAR PVDRPWPGHLDGPAPGIVYSRPLPARLETTDGMPLTTSSDLPTITPGWFHDGTLRRRVIA WAGPWPVRQRWWSTPTVSVERVQLITEDQQAWVLAGSADRWWIEARYDEA >gi|302034495|gb|GL383256.1| GENE 3 5060 - 5656 310 198 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4697 NR:ns ## KEGG: HMPREF0675_4697 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 198 1 198 198 359 98.0 4e-98 MVDVDALVSRGVDGLEVPNGHAIHPLLQPLFPGGLMPAVYRLDGASSVGLGLLTHGWCGV VGLPELSVEAARQWGVELSRLVLVPDPGNWLETVATLIEGLDVVLAVAPPPLPITAGRRL TARLRSRGSTLVVLGPWPNPAARIDVRTIGWRGLGQGYGCLSAQELEVTVVRHHRNRSVR LVRTGAGVHSAKERADAC >gi|302034495|gb|GL383256.1| GENE 4 5873 - 6073 82 66 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVLPLVPVTLAMRRPAKSSGKALGASFIATRPRMDAPEPFPAMRETVAAVRPASRASCSC GELRCL >gi|302034495|gb|GL383256.1| GENE 5 5991 - 7145 734 384 aa, chain + ## HITS:1 COG:Cgl0247 KEGG:ns NR:ns ## COG: Cgl0247 COG0769 # Protein_GI_number: 19551497 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl tripeptide synthase # Organism: Corynebacterium glutamicum # 2 379 46 415 423 219 37.0 9e-57 MKLAPRALPELLAGRRIASVTGTNGKTTTTHFLTAAVRAGTSDSQRSVVTNADGANLHHG IVSALGQAPDATIAVLETDERVVADVVAMGSPEVLVLLNFSRDQLDRNHELTFLGRDWRV ALEKVAERGPTVVANACDPLIVWVCQKARHVIWVDTKPRWTADATLCPNCGAVLTHSDQG WDCPGCELQQPAADWWVEDHDAVEASGRRFHLDVQVPGSFNLTNATCALAAAIHMGIQPE DALRGIATVKSPAGRYATCTISGTRCRLLLSKNPAGWTESLPLTTSDPLVLAIDAVAADG KDVSWLWDVDYEQLAGRTVICAGPRALDLAVRLQYAEVKHIVIEDLSQALSSPLLAGKWD AEHPIDVLSTYTPFQKLRRLGGLA >gi|302034495|gb|GL383256.1| GENE 6 7142 - 7870 676 242 aa, chain + ## HITS:1 COG:Cgl0246 KEGG:ns NR:ns ## COG: Cgl0246 COG3442 # Protein_GI_number: 19551496 # Func_class: R General function prediction only # Function: Predicted glutamine amidotransferase # Organism: Corynebacterium glutamicum # 8 234 6 249 250 174 47.0 1e-43 MNIDRPKIVLLYQSLLGIYGDHGNAVVLTKRLQWRGIDAELLIVEPGQPVPTDGAVYLLG GGEDTAQITAVQELEADGGLFTALDDGAMLFAVCAGYQICGKSFTIGARNEVIKGLGLLD AETRRGPERAVGEVLHIWTQSDSNTYPITGFENHGGWTELGSDAKPLAAVEIGWGNGNRR DEGAVQGRVIGTYPHGPVLVRNPQLADHVLEMALGRRLEPLDIPEMAALRQRRIEAVRTD RS >gi|302034495|gb|GL383256.1| GENE 7 8260 - 9573 1431 437 aa, chain + ## HITS:1 COG:Cgl0706 KEGG:ns NR:ns ## COG: Cgl0706 COG1653 # Protein_GI_number: 19551956 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Corynebacterium glutamicum # 51 427 47 415 424 219 33.0 1e-56 MMHYTHSRRAFIQGSVGALALSALAACSSGDSKGSESNKPAAKEGDFTGEGPISWVQGKD LSGGMVQKRLDEWNAKYPKEKVSLIELSSEADQQRQSLINAAQTNSAAYDVIGLDLVWVA EFAANRWIVEIPSDTKPVGVIDSVWETGSYRGKQYAVPYTTDAPIMYYRKDFLEQAKVEI PKTWEDVKKATEAVRKLPGMQNIGGFGGQWAKYEGLTCNIAEFINTCGGAIVDDSGKVTV DSPESIKGIQTAIDAFKSKLIPTAALEWKEEDSRNGFESGKVLFLRNWPYQYGNDLKELG PDKFGLAPLPSIDGKAYTPALGGHNCAITTNCKNKATALKFVKWWTSKESEQYNLEKQSN APIYGELYTKDENVKKLPYLPTLKASLDAAKGRPHAVAYGDVTAAIQDAIYPALQGKTDA ESAAKQLAEKLKTIIKN >gi|302034495|gb|GL383256.1| GENE 8 9793 - 10833 1064 346 aa, chain + ## HITS:1 COG:Cgl0704 KEGG:ns NR:ns ## COG: Cgl0704 COG1175 # Protein_GI_number: 19551954 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Corynebacterium glutamicum # 19 342 6 343 344 250 44.0 3e-66 MTTATVEQTNKRSSRAKSQERLALALIAPTLIVLTIVIVIPVIQSVKQTLYGQPGLDPET GFVNETEPFVGMKNFADIFTGSGERFWTAFWNTTLFGVVTVVLETILGVIMALIMHRAMA GRGIVRAAILVPWAIPTAVSAILWGWIFNQNGVANAIIGTHIMWASGNWTAKWSIIIADV WKTAPYIGLLTLAGLQVIPTEVYEAAKVDGANAWKRFVSITLPLVKPALVVAVLFRALDA LRMFDLPFILVGPRMKSVETLSMLVQDEASNLRYGAAAAYAIILFLYVFIIAFAFIKILG ADLVGDEHKYKKMKATTFVSGGRPGGRRARQKANAVQAAASKEAAS >gi|302034495|gb|GL383256.1| GENE 9 10830 - 11711 992 293 aa, chain + ## HITS:1 COG:Cgl0703 KEGG:ns NR:ns ## COG: Cgl0703 COG0395 # Protein_GI_number: 19551953 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Corynebacterium glutamicum # 20 293 3 277 278 263 50.0 3e-70 MSTVTATAPGTFDQETHHKKNTWAKVLPIIGIVLIVIYCLAPFYWILVSSLRPDSEIFDN TWWPAHPSMENYQAVFQPSNNFLRGLLNSLIVSVAVTVIALLIATFASYALARLDFRGKG GFLILIIATSMFPLVAIIVPLLKNFSAWHWINTYQAMIIPDLSFSLPLAVWNLTTFFKQM PDELEQAAMIDGCSPAQAFRKIILPLAAPGIFTTAIIVFIGAWNEFLVAVTMINDPEMEP ATVLLSKFTGASQFNSPFGSQMAAGVIMTVPLVIMVLVFQRRIVAGLAAGGIK >gi|302034495|gb|GL383256.1| GENE 10 11785 - 12351 626 188 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4706 NR:ns ## KEGG: HMPREF0675_4706 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 188 1 188 188 199 98.0 4e-50 MADSKSKAKDERTADEIRRDIAATRARLAAGVENLVEEVHPATLKREASDRARDFVQGEF DQVKSQVKDENGWRVQRIAMAAGALAAGVVSIIVLRAIVGRATGATARRKLEKLQLSQAK RVRKDAKQRRKEDVKAAKKNAKLGKKNAKKYGKLDTDDSSVSNLAEKMLKQAAVLRAQAA AERENSAA >gi|302034495|gb|GL383256.1| GENE 11 12435 - 12920 527 161 aa, chain + ## HITS:1 COG:MT2597 KEGG:ns NR:ns ## COG: MT2597 COG1225 # Protein_GI_number: 15842053 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Mycobacterium tuberculosis CDC1551 # 2 159 4 157 157 176 57.0 2e-44 MSTRLQPGNAAPDFTLPAASGDHITLSDFTGKRVIVYFYPAAMTPGCTTQAVDFTAHLDE FEEAGYKVLGISPDPVAKLQKFVAKESLTLTLLSDEGKEVMKAYGAYGSKNVYGKEIVGV IRSTFVVDVAEDGSCKVTEAQYNVRAKGHVDKLCKELKIDC >gi|302034495|gb|GL383256.1| GENE 12 13286 - 13441 74 51 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|315100762|gb|EFT72738.1| ## NR: gi|315100762|gb|EFT72738.1| hypothetical protein HMPREF9592_00216 [Propionibacterium acnes HL046PA1] hypothetical protein HMPREF9581_01350 [Propionibacterium acnes HL087PA3] hypothetical protein HMPREF9579_01375 [Propionibacterium acnes HL087PA1] # 1 51 1 51 51 92 100.0 8e-18 MLRLTTPHPFPSTDSNWPKQVYERGGVVNLGVTLEGTIHASAPLPYTEASF >gi|302034495|gb|GL383256.1| GENE 13 13456 - 14334 399 292 aa, chain + ## HITS:1 COG:AGc393 KEGG:ns NR:ns ## COG: AGc393 COG3757 # Protein_GI_number: 15887583 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lyzozyme M1 (1,4-beta-N-acetylmuramidase) # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 83 291 116 312 319 84 29.0 4e-16 MNCSFNRRQRSWLAAMVSGMTVITFVPAAVAHASETQLPEESSSSSAPSSSDHAMGSQIK KHEHETAVTNRVQSLTIDTEPEGMDVSSHDGNVDWPAKVSSGMSFAWVKATEGTSYQNPF YASQYNGSQSAGLIRGAYHFALPSNSSGQAQATYFSDHGGGWSEDGYTLPGVVDLEYNPY GENACYGLSQTAMASWIRDFVSTYQERWDRAPMIYTSTSWWNMCVGSAASDITAVAPLWI ARYSSTVGELPSGWDAWTMWQYSNTGYDHDRMAGTREDLEKFATNETATPRH >gi|302034495|gb|GL383256.1| GENE 14 14597 - 14812 56 71 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313831142|gb|EFS68856.1| ## NR: gi|313831142|gb|EFS68856.1| conserved domain protein [Propionibacterium acnes HL007PA1] conserved domain protein [Propionibacterium acnes HL045PA1] conserved domain protein [Propionibacterium acnes HL005PA2] conserved domain protein [Propionibacterium acnes HL092PA1] # 17 71 1 55 55 89 89.0 6e-17 MLGWLSVLLESGSRTVMPIYSQHGHYFSDHAVHGCGGVLSLLQDCPYILTLDGSHCFSEV CRWMRLYGHDS >gi|302034495|gb|GL383256.1| GENE 15 14727 - 15005 212 92 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4710 NR:ns ## KEGG: HMPREF0675_4710 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 87 1 87 87 121 86.0 1e-26 MRTHSKSNTAAPLNGLVIGAIIGVAMATFTSVLMFLIEFFLFADHVSFSGVKVATHPLPL VVFPFAGLALSIIGIRLKNSNAHLFSAWALLQ >gi|302034495|gb|GL383256.1| GENE 16 15004 - 15450 180 148 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313814751|gb|EFS52465.1| ## NR: gi|313814751|gb|EFS52465.1| hypothetical protein HMPREF9589_02455 [Propionibacterium acnes HL059PA1] hypothetical protein HMPREF9597_02325 [Propionibacterium acnes HL005PA4] hypothetical protein HMPREF9588_00503 [Propionibacterium acnes HL025PA2] # 1 148 21 168 168 296 100.0 4e-79 MGGHCGSFLVVVWESQASPNTVAARVSLFRVGHREAAVPAINHAIANIDRHNHNLISCPQ DEDFDISRIEEKNQAKACCNIKPGDHRGDHRYEHSHHCYATHPNDVSPVIMQDIGPDCAE HPPNHRENNQWGTYMITALPLKIASLGI >gi|302034495|gb|GL383256.1| GENE 17 15390 - 15647 225 85 aa, chain - ## HITS:1 COG:no KEGG:PPA1663 NR:ns ## KEGG: PPA1663 # Name: not_defined # Def: protein associated to putative adhesion protein # Organism: P.acnes # Pathway: not_defined # 1 83 45 127 188 158 98.0 5e-38 MSVQGNYLMSVVFPVAGWLAGLWGRTVGACENPAIKKRKIRIIGAVMATLTGLIMTIHEH FIAWRNYIPRDAIFSGKAVIIYVPH Prediction of potential genes in microbial genomes Time: Thu Jul 21 05:33:20 2011 Seq name: gi|302034494|gb|GL383257.1| Propionibacterium acnes HL025PA2 genomic scaffold Scfld10, whole genome shotgun sequence Length of sequence - 320039 bp Number of predicted genes - 296, with homology - 281 Number of transcription units - 150, operones - 71 average op.length - 3.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 2 - 39 -0.1 1 1 Tu 1 . - CDS 166 - 1173 670 ## COG1522 Transcriptional regulators + Prom 1182 - 1241 1.8 2 2 Op 1 . + CDS 1467 - 2510 951 ## COG3804 Uncharacterized conserved protein related to dihydrodipicolinate reductase 3 2 Op 2 . + CDS 2522 - 2869 218 ## HMPREF0675_5354 hypothetical protein 4 2 Op 3 . + CDS 2866 - 4287 1230 ## COG0498 Threonine synthase 5 2 Op 4 . + CDS 4287 - 4709 346 ## HMPREF0675_5356 hypothetical protein 6 2 Op 5 . + CDS 4706 - 6667 1746 ## PPA2280 D-ornithine aminomutase E component 7 2 Op 6 . + CDS 6749 - 7024 346 ## COG5012 Predicted cobalamin binding protein 8 2 Op 7 . + CDS 7030 - 8460 964 ## HMPREF0675_5358 putative reactivating factor for D-ornithine aminomutase (EC:5.4.99.1) 9 2 Op 8 . + CDS 8457 - 9545 861 ## COG3457 Predicted amino acid racemase 10 2 Op 9 3/0.033 + CDS 9584 - 11059 1182 ## COG1113 Gamma-aminobutyrate permease and related permeases + Prom 11277 - 11336 3.3 11 3 Tu 1 . + CDS 11423 - 12937 1009 ## COG1113 Gamma-aminobutyrate permease and related permeases + Term 12949 - 13001 3.2 12 4 Tu 1 . + CDS 13164 - 14291 731 ## COG0787 Alanine racemase 13 5 Tu 1 1/0.100 - CDS 14481 - 15905 1056 ## COG1109 Phosphomannomutase 14 6 Op 1 . - CDS 16022 - 17212 727 ## COG0153 Galactokinase 15 6 Op 2 . - CDS 17209 - 18045 791 ## COG1209 dTDP-glucose pyrophosphorylase 16 6 Op 3 . - CDS 18100 - 18225 61 ## 17 7 Tu 1 . + CDS 18170 - 18997 234 ## HMPREF0675_5366 hypothetical protein 18 8 Tu 1 . - CDS 19191 - 20093 230 ## HMPREF0675_5367 hypothetical protein + Prom 20073 - 20132 2.3 19 9 Tu 1 . + CDS 20343 - 21749 1165 ## COG0114 Fumarase - Term 21784 - 21845 -0.8 20 10 Op 1 38/0.000 - CDS 22077 - 22988 803 ## COG0395 ABC-type sugar transport system, permease component 21 10 Op 2 . - CDS 22990 - 23883 589 ## COG1175 ABC-type sugar transport systems, permease components 22 11 Tu 1 . + CDS 23777 - 23983 82 ## - Term 24045 - 24100 -0.7 23 12 Tu 1 . - CDS 24121 - 25455 1218 ## HMPREF0675_5372 bacterial extracellular solute-binding protein - Prom 25558 - 25617 2.3 24 13 Tu 1 . + CDS 25654 - 26661 579 ## COG1609 Transcriptional regulators 25 14 Op 1 . - CDS 26670 - 27362 506 ## HMPREF0675_5374 hypothetical protein 26 14 Op 2 . - CDS 27322 - 27537 104 ## gi|327334474|gb|EGE76185.1| hypothetical protein HMPREF9344_00337 27 15 Tu 1 . + CDS 27488 - 28345 768 ## COG0668 Small-conductance mechanosensitive channel + Term 28470 - 28503 4.2 28 16 Tu 1 . - CDS 28515 - 29723 807 ## COG1929 Glycerate kinase 29 17 Tu 1 . + CDS 29774 - 30028 221 ## HMPREF0675_5377 hypothetical protein 30 18 Tu 1 . + CDS 30134 - 31633 1153 ## COG0617 tRNA nucleotidyltransferase/poly(A) polymerase - Term 31587 - 31624 3.5 31 19 Tu 1 . - CDS 31630 - 31854 118 ## gi|313765088|gb|EFS36452.1| hypothetical protein HMPREF9567_00727 32 20 Op 1 . + CDS 31736 - 33817 1135 ## HMPREF0675_5379 hypothetical protein 33 20 Op 2 . + CDS 33891 - 35696 738 ## COG0515 Serine/threonine protein kinase 34 21 Op 1 18/0.000 - CDS 36046 - 37569 1567 ## COG0554 Glycerol kinase 35 21 Op 2 . - CDS 37654 - 38406 824 ## COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) + Prom 38425 - 38484 2.3 36 22 Tu 1 . + CDS 38595 - 39542 673 ## COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain + Term 39561 - 39610 8.4 - Term 39547 - 39594 11.0 37 23 Op 1 . - CDS 39613 - 41052 894 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 38 23 Op 2 . - CDS 41156 - 41827 335 ## COG3534 Alpha-L-arabinofuranosidase 39 24 Tu 1 . + CDS 41960 - 43012 662 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 + Term 43033 - 43080 10.9 - Term 43469 - 43509 0.1 40 25 Tu 1 . - CDS 43541 - 44353 552 ## COG0564 Pseudouridylate synthases, 23S RNA-specific + Prom 44635 - 44694 1.7 41 26 Op 1 1/0.100 + CDS 44755 - 46002 949 ## COG0477 Permeases of the major facilitator superfamily 42 26 Op 2 . + CDS 46004 - 46933 757 ## COG0657 Esterase/lipase - Term 47019 - 47048 -0.1 43 27 Op 1 . - CDS 47057 - 47494 384 ## HMPREF0675_5391 OsmC-like protein 44 27 Op 2 . - CDS 47504 - 47830 407 ## COG0526 Thiol-disulfide isomerase and thioredoxins - Prom 47958 - 48017 2.1 45 28 Tu 1 . + CDS 47829 - 48032 138 ## gi|327448789|gb|EGE95443.1| hypothetical protein HMPREF9570_00352 46 29 Tu 1 . - CDS 48071 - 49138 946 ## COG0240 Glycerol-3-phosphate dehydrogenase 47 30 Op 1 . - CDS 49338 - 49670 97 ## COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain 48 30 Op 2 . - CDS 49549 - 50139 137 ## COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain 49 30 Op 3 . - CDS 50149 - 52212 1882 ## COG0021 Transketolase 50 31 Op 1 . - CDS 52349 - 54058 1261 ## COG1069 Ribulose kinase 51 31 Op 2 . - CDS 54131 - 55495 1101 ## COG0371 Glycerol dehydrogenase and related enzymes 52 31 Op 3 . - CDS 55479 - 57083 1150 ## COG1069 Ribulose kinase 53 31 Op 4 . - CDS 57140 - 57997 652 ## COG0647 Predicted sugar phosphatases of the HAD superfamily 54 31 Op 5 . - CDS 58020 - 59099 1093 ## PPA2323 hypothetical protein 55 32 Tu 1 . - CDS 59243 - 59725 476 ## COG0698 Ribose 5-phosphate isomerase RpiB - Prom 59794 - 59853 4.0 56 33 Op 1 1/0.100 - CDS 59942 - 60460 316 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 57 33 Op 2 . - CDS 60512 - 61318 477 ## COG1349 Transcriptional regulators of sugar metabolism 58 34 Op 1 7/0.000 - CDS 61592 - 62659 811 ## COG1312 D-mannonate dehydratase 59 34 Op 2 3/0.033 - CDS 62668 - 64257 974 ## COG0246 Mannitol-1-phosphate/altronate dehydrogenases 60 34 Op 3 2/0.067 - CDS 64273 - 65685 811 ## COG1904 Glucuronate isomerase 61 34 Op 4 . - CDS 65750 - 66757 643 ## COG1609 Transcriptional regulators - Prom 66910 - 66969 1.8 + Prom 66834 - 66893 1.6 62 35 Op 1 3/0.033 + CDS 66934 - 68358 1290 ## COG2211 Na+/melibiose symporter and related transporters 63 35 Op 2 . + CDS 68378 - 70870 1567 ## COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases 64 35 Op 3 . + CDS 70903 - 72351 768 ## COG3250 Beta-galactosidase/beta-glucuronidase 65 35 Op 4 . + CDS 72140 - 72685 328 ## COG3250 Beta-galactosidase/beta-glucuronidase 66 35 Op 5 . + CDS 72789 - 76190 2759 ## HMPREF0675_5414 hypothetical protein + Term 76195 - 76241 9.7 - Term 76296 - 76342 -0.9 67 36 Op 1 . - CDS 76403 - 76648 90 ## 68 36 Op 2 . - CDS 76684 - 76971 88 ## 69 37 Tu 1 . - CDS 77104 - 77343 214 ## PPA2336 hypothetical protein + Prom 77693 - 77752 1.7 70 38 Tu 1 . + CDS 77985 - 79331 980 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 71 39 Op 1 . + CDS 79626 - 80609 460 ## COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes 72 39 Op 2 . + CDS 80602 - 81318 337 ## PPA2339 membrane-associated protein 73 39 Op 3 . + CDS 81330 - 81887 390 ## HMPREF0675_5419 hypothetical protein + Term 82087 - 82144 4.5 74 40 Op 1 25/0.000 - CDS 82145 - 83065 456 ## COG1475 Predicted transcriptional regulators 75 40 Op 2 . - CDS 83068 - 84054 224 ## COG1192 ATPases involved in chromosome partitioning - Prom 84106 - 84165 2.9 76 41 Tu 1 . + CDS 85259 - 85624 71 ## PPA2371 hypothetical protein - Term 85629 - 85682 0.7 77 42 Tu 1 . - CDS 85881 - 86507 426 ## COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division 78 43 Tu 1 . + CDS 86804 - 87016 105 ## gi|313771078|gb|EFS37044.1| hypothetical protein HMPREF9574_02595 + Term 87092 - 87131 2.3 79 44 Tu 1 . - CDS 86953 - 87153 113 ## PPA2345 hypothetical protein - Prom 87327 - 87386 2.4 80 45 Tu 1 . + CDS 87240 - 87545 79 ## PPA2373 hypothetical protein 81 46 Tu 1 . + CDS 87826 - 88263 60 ## PPA2372 hypothetical protein 82 47 Op 1 . - CDS 88493 - 89521 661 ## HMPREF0675_5425 alanine racemase, N-terminal domain protein 83 47 Op 2 . - CDS 89523 - 90614 921 ## COG2348 Uncharacterized protein involved in methicillin resistance - Prom 90852 - 90911 34.5 - Term 90806 - 90850 13.5 84 48 Op 1 16/0.000 - CDS 90927 - 91538 605 ## COG1847 Predicted RNA-binding protein 85 48 Op 2 18/0.000 - CDS 91591 - 92670 993 ## COG0706 Preprotein translocase subunit YidC 86 48 Op 3 . - CDS 92670 - 93146 218 ## COG0759 Uncharacterized conserved protein 87 48 Op 4 . - CDS 93143 - 93589 165 ## HMPREF0675_5431 ribonuclease P protein component (EC:3.1.26.5) 88 48 Op 5 . - CDS 93596 - 93730 215 ## PROTEIN SUPPORTED gi|50843793|ref|YP_057020.1| 50S ribosomal protein L34 - Prom 93838 - 93897 1.8 + Prom 93882 - 93941 1.8 89 49 Tu 1 . + CDS 94090 - 95613 1652 ## COG0593 ATPase involved in DNA replication initiation 90 50 Tu 1 . - CDS 95658 - 95897 104 ## 91 51 Tu 1 . + CDS 96001 - 97245 1097 ## COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) 92 52 Op 1 . + CDS 97382 - 98035 228 ## HMPREF0675_3002 hypothetical protein 93 52 Op 2 5/0.033 + CDS 98093 - 99277 565 ## COG1195 Recombinational DNA repair ATPase (RecF pathway) 94 52 Op 3 . + CDS 99270 - 99863 214 ## COG5512 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives + Term 99871 - 99926 17.5 95 53 Op 1 . - CDS 99927 - 100493 182 ## COG1132 ABC-type multidrug transport system, ATPase and permease components 96 53 Op 2 . - CDS 100354 - 101013 303 ## HMPREF0675_3006 hypothetical protein 97 53 Op 3 . - CDS 101026 - 101376 324 ## HMPREF0675_3006 hypothetical protein + Prom 101161 - 101220 2.3 98 54 Tu 1 . + CDS 101375 - 101701 56 ## gi|313765019|gb|EFS36383.1| conserved domain protein + Term 101826 - 101866 1.1 99 55 Tu 1 . - CDS 101784 - 102011 60 ## - Prom 102154 - 102213 1.8 + Prom 101930 - 101989 2.5 100 56 Op 1 . + CDS 102010 - 102219 84 ## 101 56 Op 2 . + CDS 102170 - 103357 857 ## COG1482 Phosphomannose isomerase - Term 103204 - 103232 0.6 102 57 Tu 1 . - CDS 103256 - 103456 98 ## 103 58 Op 1 24/0.000 + CDS 103599 - 105671 2099 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 104 58 Op 2 . + CDS 105713 - 108388 2380 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 105 58 Op 3 . + CDS 108381 - 109013 553 ## PPA0011 hypothetical protein 106 59 Tu 1 . - CDS 109112 - 110080 826 ## COG0039 Malate/lactate dehydrogenases 107 60 Tu 1 . - CDS 110353 - 110550 231 ## gi|313765011|gb|EFS36375.1| hypothetical protein HMPREF9567_00650 + Prom 110456 - 110515 1.7 108 61 Op 1 2/0.067 + CDS 110598 - 111605 742 ## COG1609 Transcriptional regulators 109 61 Op 2 21/0.000 + CDS 111602 - 113107 1055 ## COG1129 ABC-type sugar transport system, ATPase component 110 61 Op 3 16/0.000 + CDS 113190 - 114167 1054 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 111 61 Op 4 8/0.000 + CDS 114216 - 115157 999 ## COG1879 ABC-type sugar transport system, periplasmic component 112 61 Op 5 6/0.000 + CDS 115154 - 116083 676 ## COG0524 Sugar kinases, ribokinase family 113 61 Op 6 . + CDS 116080 - 116463 276 ## COG1869 ABC-type ribose transport system, auxiliary component + Term 116531 - 116566 -0.7 + TRNA 116558 - 116631 92.1 # Ile GAT 0 0 + Prom 116555 - 116614 75.1 114 62 Tu 1 . + CDS 116634 - 116915 139 ## PPA0020 hypothetical protein - Term 116966 - 117031 4.8 115 63 Op 1 . - CDS 117067 - 117543 440 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 116 63 Op 2 10/0.000 - CDS 117600 - 118856 1098 ## COG3775 Phosphotransferase system, galactitol-specific IIC component 117 63 Op 3 1/0.100 - CDS 118877 - 119179 336 ## COG3414 Phosphotransferase system, galactitol-specific IIB component 118 63 Op 4 . - CDS 119169 - 119552 249 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 119 64 Tu 1 . + CDS 120304 - 121719 614 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) + Term 121943 - 121980 -0.7 120 65 Tu 1 . - CDS 122292 - 122507 88 ## PPA2391 hypothetical protein 121 66 Tu 1 . + CDS 122654 - 122869 107 ## HMPREF0675_3027 hypothetical protein + Term 123033 - 123065 -1.0 122 67 Op 1 . - CDS 122780 - 123163 60 ## PPA2390 hypothetical protein 123 67 Op 2 . - CDS 123177 - 123518 249 ## PPA0029 hypothetical protein 124 68 Op 1 . - CDS 123871 - 124515 285 ## COG0637 Predicted phosphatase/phosphohexomutase 125 68 Op 2 . - CDS 124502 - 124633 62 ## gi|313826226|gb|EFS63940.1| hypothetical protein HMPREF9611_00524 - Prom 124653 - 124712 1.6 126 69 Tu 1 . + CDS 124632 - 125390 365 ## COG1349 Transcriptional regulators of sugar metabolism + Term 125475 - 125531 -1.0 127 70 Tu 1 . - CDS 125487 - 125699 107 ## - Prom 125887 - 125946 2.3 128 71 Tu 1 . + CDS 125608 - 125781 60 ## 129 72 Op 1 . - CDS 126007 - 126744 457 ## HMPREF0675_3034 hypothetical protein 130 72 Op 2 . - CDS 126738 - 127262 307 ## PPA0033 hypothetical protein 131 72 Op 3 . - CDS 127241 - 127498 151 ## gi|328756045|gb|EGF69661.1| hypothetical protein HMPREF9579_00532 132 73 Tu 1 . + CDS 127411 - 128469 782 ## COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase - Term 128415 - 128458 -0.5 133 74 Tu 1 . - CDS 128473 - 129351 733 ## COG4667 Predicted esterase of the alpha-beta hydrolase superfamily 134 75 Op 1 . + CDS 129403 - 129969 461 ## PROTEIN SUPPORTED gi|239918508|ref|YP_002958066.1| acetyltransferase, ribosomal protein N-acetylase 135 75 Op 2 . + CDS 129983 - 130642 355 ## HMPREF0675_3038 hypothetical protein + Prom 130646 - 130705 1.7 136 76 Op 1 . + CDS 130895 - 131533 311 ## HMPREF0675_3039 SAF domain protein 137 76 Op 2 . + CDS 131533 - 132351 391 ## PPA0040 hypothetical protein 138 76 Op 3 . + CDS 132348 - 133826 633 ## COG4962 Flp pilus assembly protein, ATPase CpaF 139 76 Op 4 . + CDS 133817 - 134698 460 ## HMPREF0675_3042 type II secretion system F domain protein 140 76 Op 5 . + CDS 134691 - 135593 648 ## HMPREF0675_3043 type II secretion system F domain protein 141 76 Op 6 . + CDS 135681 - 135875 171 ## HMPREF0675_3044 hypothetical protein 142 76 Op 7 . + CDS 135944 - 136252 202 ## PPA0044 hypothetical protein 143 77 Op 1 . + CDS 136402 - 136758 163 ## HMPREF0675_3046 hypothetical protein 144 77 Op 2 . + CDS 136755 - 139517 996 ## HMPREF0675_3047 LysM domain protein + Term 139547 - 139584 -0.6 - Term 139450 - 139488 1.1 145 78 Op 1 . - CDS 139571 - 140914 1084 ## COG0477 Permeases of the major facilitator superfamily 146 78 Op 2 . - CDS 140845 - 141090 70 ## 147 79 Tu 1 . + CDS 141284 - 142993 1449 ## COG2759 Formyltetrahydrofolate synthetase 148 80 Tu 1 . + CDS 143099 - 143512 339 ## HMPREF0675_3050 hypothetical protein 149 81 Op 1 . - CDS 143509 - 144030 426 ## HMPREF0675_3051 hypothetical protein 150 81 Op 2 . - CDS 144055 - 144729 356 ## PPA0052 hypothetical protein - Term 144864 - 144903 11.2 151 82 Op 1 36/0.000 - CDS 144927 - 147398 1859 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 152 82 Op 2 . - CDS 147398 - 148432 262 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 153 83 Op 1 . - CDS 148540 - 149196 608 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 154 83 Op 2 . - CDS 149215 - 149763 287 ## PPA0056 hypothetical protein 155 84 Op 1 38/0.000 - CDS 149899 - 150729 626 ## COG0395 ABC-type sugar transport system, permease component 156 84 Op 2 35/0.000 - CDS 150726 - 151691 782 ## COG1175 ABC-type sugar transport systems, permease components 157 84 Op 3 . - CDS 151707 - 153011 1224 ## COG1653 ABC-type sugar transport system, periplasmic component - Prom 153175 - 153234 2.7 - Term 153201 - 153257 2.2 158 85 Tu 1 . - CDS 153343 - 153582 136 ## 159 86 Op 1 1/0.100 + CDS 153463 - 154116 558 ## COG1349 Transcriptional regulators of sugar metabolism 160 86 Op 2 . + CDS 154113 - 155501 1204 ## COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases 161 86 Op 3 . + CDS 155494 - 158622 1734 ## COG0383 Alpha-mannosidase + Prom 158735 - 158794 2.6 162 87 Op 1 . + CDS 158924 - 159712 574 ## COG1524 Uncharacterized proteins of the AP superfamily 163 87 Op 2 . + CDS 159706 - 160350 453 ## COG0637 Predicted phosphatase/phosphohexomutase 164 87 Op 3 . + CDS 160347 - 161642 697 ## COG3538 Uncharacterized conserved protein 165 88 Tu 1 . - CDS 161626 - 163164 839 ## COG3525 N-acetyl-beta-hexosaminidase 166 89 Tu 1 . + CDS 163270 - 164205 554 ## COG0524 Sugar kinases, ribokinase family + Term 164251 - 164292 0.9 167 90 Tu 1 . - CDS 164224 - 165594 1048 ## COG4585 Signal transduction histidine kinase 168 91 Tu 1 . + CDS 165774 - 166763 971 ## COG1087 UDP-glucose 4-epimerase 169 92 Tu 1 . - CDS 166836 - 167468 566 ## PPA0070 transcriptional regulator 170 93 Op 1 . + CDS 167588 - 170317 2036 ## COG2409 Predicted drug exporters of the RND superfamily 171 93 Op 2 . + CDS 170317 - 172683 1512 ## COG1511 Predicted membrane protein 172 94 Op 1 . - CDS 172869 - 174314 950 ## PPA0073 hypothetical protein 173 94 Op 2 . - CDS 174317 - 175069 271 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 174 95 Op 1 . + CDS 175023 - 175229 99 ## gi|314926496|gb|EFS90327.1| hypothetical protein HMPREF9606_00755 175 95 Op 2 2/0.067 + CDS 175284 - 176153 295 ## COG0500 SAM-dependent methyltransferases + Prom 176221 - 176280 2.7 176 96 Op 1 33/0.000 + CDS 176374 - 177402 689 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 177 96 Op 2 . + CDS 177383 - 178552 475 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 178 96 Op 3 . + CDS 178545 - 179312 179 ## PROTEIN SUPPORTED gi|225088774|ref|YP_002660041.1| ribosomal protein S16 179 97 Tu 1 . - CDS 178827 - 179075 67 ## - Prom 179314 - 179373 2.3 180 98 Op 1 . + CDS 179395 - 180852 1468 ## COG1012 NAD-dependent aldehyde dehydrogenases 181 98 Op 2 . + CDS 180897 - 182183 876 ## COG0038 Chloride channel protein EriC 182 98 Op 3 . + CDS 182238 - 184604 2684 ## COG0058 Glucan phosphorylase + Term 184663 - 184693 -0.1 183 99 Op 1 . - CDS 184669 - 185061 459 ## HMPREF0675_3082 hypothetical protein 184 99 Op 2 . - CDS 185046 - 185681 384 ## PPA0082 hypothetical protein - Prom 185721 - 185780 3.4 185 100 Tu 1 . + CDS 185616 - 185954 101 ## 186 101 Tu 1 . - CDS 185869 - 188085 1564 ## PPA0083 hypothetical protein - Prom 188116 - 188175 5.3 - Term 188115 - 188150 -0.9 187 102 Tu 1 . - CDS 188215 - 189426 468 ## COG1940 Transcriptional regulator/sugar kinase - Prom 189450 - 189509 1.9 + Prom 189649 - 189708 1.8 188 103 Op 1 35/0.000 + CDS 189783 - 191126 1241 ## COG1653 ABC-type sugar transport system, periplasmic component 189 103 Op 2 38/0.000 + CDS 191227 - 192105 755 ## COG1175 ABC-type sugar transport systems, permease components 190 103 Op 3 . + CDS 192105 - 192986 867 ## COG0395 ABC-type sugar transport system, permease component 191 103 Op 4 . + CDS 193003 - 193179 185 ## gi|289424703|ref|ZP_06426486.1| hypothetical protein HMPREF1034_1734 192 103 Op 5 . + CDS 193181 - 194245 599 ## COG1609 Transcriptional regulators 193 103 Op 6 . + CDS 194235 - 194888 169 ## PPA0089 glycosyl hydrolase family protein 194 103 Op 7 . + CDS 194849 - 196423 622 ## HMPREF0675_3092 hypothetical protein 195 104 Tu 1 . + CDS 196783 - 197910 1120 ## COG0205 6-phosphofructokinase - Term 197836 - 197892 -0.6 196 105 Op 1 . - CDS 197948 - 198529 324 ## COG2345 Predicted transcriptional regulator 197 105 Op 2 . - CDS 198526 - 201267 1806 ## COG2132 Putative multicopper oxidases 198 105 Op 3 . - CDS 201260 - 202393 852 ## PPA0093 hypothetical protein - Prom 202636 - 202695 2.3 + Prom 202527 - 202586 2.9 199 106 Op 1 4/0.033 + CDS 202823 - 204295 1243 ## COG1027 Aspartate ammonia-lyase 200 106 Op 2 . + CDS 204302 - 205600 750 ## COG2704 Anaerobic C4-dicarboxylate transporter + Term 205717 - 205757 2.5 - Term 205631 - 205690 22.3 201 107 Op 1 . - CDS 205701 - 205982 268 ## COG2388 Predicted acetyltransferase 202 107 Op 2 . - CDS 205999 - 206238 79 ## gi|332674497|gb|AEE71313.1| hypothetical protein PAZ_c01040 203 108 Tu 1 . + CDS 206120 - 207571 1279 ## COG0753 Catalase 204 109 Op 1 35/0.000 - CDS 207609 - 209354 1193 ## COG1132 ABC-type multidrug transport system, ATPase and permease components 205 109 Op 2 . - CDS 209351 - 210979 1118 ## COG1132 ABC-type multidrug transport system, ATPase and permease components 206 110 Op 1 . - CDS 211114 - 212100 776 ## COG1239 Mg-chelatase subunit ChlI 207 110 Op 2 1/0.100 - CDS 212102 - 214066 1156 ## COG1239 Mg-chelatase subunit ChlI 208 110 Op 3 . - CDS 214066 - 217971 2834 ## COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatases 209 110 Op 4 . - CDS 217968 - 219062 315 ## COG0641 Arylsulfatase regulator (Fe-S oxidoreductase) 210 110 Op 5 35/0.000 - CDS 219059 - 220060 680 ## COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 211 110 Op 6 33/0.000 - CDS 220057 - 220989 756 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 212 110 Op 7 8/0.000 - CDS 221279 - 222523 1143 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 213 110 Op 8 . - CDS 222580 - 223830 1221 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 214 110 Op 9 . - CDS 223845 - 224075 131 ## gi|328758508|gb|EGF72124.1| conserved domain protein 215 110 Op 10 . - CDS 224132 - 224905 585 ## PPA0108 hypothetical protein 216 110 Op 11 . - CDS 224945 - 226729 1814 ## COG4716 Myosin-crossreactive antigen - Prom 226789 - 226848 2.2 217 111 Tu 1 . + CDS 226848 - 228557 1112 ## COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 218 112 Op 1 . + CDS 228681 - 228911 167 ## PPA0111 hypothetical protein 219 112 Op 2 . + CDS 228920 - 229573 449 ## COG0352 Thiamine monophosphate synthase + Term 229632 - 229677 6.0 220 113 Tu 1 . - CDS 229831 - 230790 568 ## PPA0113 hypothetical protein 221 114 Op 1 . + CDS 231207 - 231437 91 ## HMPREF0675_3119 putative K+-transporting ATPase, F subunit 222 114 Op 2 20/0.000 + CDS 231437 - 233107 1483 ## COG2060 K+-transporting ATPase, A chain 223 114 Op 3 18/0.000 + CDS 233110 - 235224 1829 ## COG2216 High-affinity K+ transport system, ATPase chain B 224 114 Op 4 15/0.000 + CDS 235237 - 235842 467 ## COG2156 K+-transporting ATPase, c chain 225 114 Op 5 16/0.000 + CDS 235907 - 238375 1843 ## COG2205 Osmosensitive K+ channel histidine kinase 226 114 Op 6 . + CDS 238372 - 239055 624 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 227 114 Op 7 . + CDS 239077 - 239583 268 ## PPA0120 hypothetical protein + Term 239654 - 239706 -0.9 + Prom 240012 - 240071 2.7 228 115 Tu 1 . + CDS 240211 - 240453 180 ## gi|313815552|gb|EFS53266.1| hypothetical protein HMPREF9589_01695 + Term 240455 - 240482 0.1 229 116 Tu 1 . + CDS 240981 - 241193 169 ## gi|327334689|gb|EGE76400.1| cytochrome c family protein - TRNA 241556 - 241628 87.8 # Ala TGC 0 0 - Term 241493 - 241539 10.7 230 117 Op 1 14/0.000 - CDS 241769 - 243142 840 ## COG0612 Predicted Zn-dependent peptidases 231 117 Op 2 . - CDS 243142 - 244413 698 ## COG0612 Predicted Zn-dependent peptidases 232 118 Op 1 . + CDS 244619 - 245038 290 ## HMPREF0675_3138 hypothetical protein 233 118 Op 2 3/0.033 + CDS 245031 - 247370 1642 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) 234 118 Op 3 . + CDS 247380 - 248927 714 ## COG5650 Predicted integral membrane protein 235 118 Op 4 . + CDS 248924 - 250099 736 ## HMPREF0675_3141 hypothetical protein 236 118 Op 5 . + CDS 250177 - 251433 564 ## HMPREF0675_3142 hypothetical protein 237 119 Op 1 . - CDS 251394 - 252656 635 ## COG0438 Glycosyltransferase 238 119 Op 2 . - CDS 252719 - 252964 100 ## 239 120 Op 1 . + CDS 252924 - 254051 1038 ## PPA0131 putative glycosyl transferase (EC:2.4.1.-) 240 120 Op 2 . + CDS 254048 - 255370 933 ## HMPREF0675_3145 O-antigen polymerase 241 121 Op 1 . - CDS 255344 - 256120 658 ## HMPREF0675_3146 hypothetical protein 242 121 Op 2 . - CDS 256122 - 256346 161 ## gi|315109979|gb|EFT81955.1| hypothetical protein HMPREF9602_01099 243 122 Op 1 9/0.000 + CDS 256294 - 256911 612 ## COG0110 Acetyltransferase (isoleucine patch superfamily) 244 122 Op 2 3/0.033 + CDS 256995 - 258107 1210 ## COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 245 122 Op 3 . + CDS 258107 - 259099 1032 ## COG0673 Predicted dehydrogenases and related proteins + Term 259111 - 259151 11.0 246 123 Tu 1 . + CDS 259201 - 260583 579 ## PPA0137 hypothetical protein 247 124 Tu 1 . - CDS 260554 - 260865 87 ## gi|313814073|gb|EFS51787.1| hypothetical protein HMPREF9587_00461 248 125 Tu 1 . + CDS 260788 - 262365 1562 ## COG3104 Dipeptide/tripeptide permease 249 126 Op 1 6/0.000 + CDS 262609 - 263793 938 ## COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases 250 126 Op 2 . + CDS 263809 - 264609 864 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 251 127 Op 1 . - CDS 264673 - 264930 270 ## HMPREF0675_3154 phosphocarrier, HPr family 252 127 Op 2 19/0.000 - CDS 264966 - 266978 1972 ## COG1299 Phosphotransferase system, fructose-specific IIC component 253 127 Op 3 . - CDS 266988 - 267962 440 ## COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) 254 127 Op 4 . - CDS 267935 - 268153 151 ## gi|314982717|gb|EFT26809.1| conserved domain protein 255 128 Tu 1 . - CDS 268267 - 269028 537 ## COG1349 Transcriptional regulators of sugar metabolism 256 129 Op 1 . + CDS 269193 - 270491 1321 ## COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase 257 129 Op 2 . + CDS 270472 - 271734 349 ## HMPREF0675_3160 O-antigen polymerase 258 130 Op 1 3/0.033 + CDS 271853 - 272968 461 ## COG0438 Glycosyltransferase + Term 273022 - 273054 -0.2 259 130 Op 2 3/0.033 + CDS 273066 - 274139 1075 ## COG0381 UDP-N-acetylglucosamine 2-epimerase 260 130 Op 3 . + CDS 274139 - 275260 684 ## COG0438 Glycosyltransferase + Term 275287 - 275320 -0.6 261 131 Tu 1 . + CDS 275483 - 276430 364 ## PPA0150 hypothetical protein - Term 276725 - 276768 8.2 262 132 Op 1 . - CDS 276774 - 277061 320 ## HMPREF0675_3165 hypothetical protein 263 132 Op 2 . - CDS 277067 - 278449 1212 ## COG1252 NADH dehydrogenase, FAD-containing subunit 264 132 Op 3 . - CDS 278522 - 278863 167 ## gi|289424513|ref|ZP_06426296.1| hypothetical protein HMPREF1034_1804 265 133 Op 1 . + CDS 278702 - 279223 324 ## PPA0154 MutT/NUDIX family protein 266 133 Op 2 . + CDS 279205 - 281721 897 ## COG1643 HrpA-like helicases 267 134 Op 1 4/0.033 + CDS 282029 - 282658 707 ## COG4721 Predicted membrane protein 268 134 Op 2 . + CDS 282655 - 284754 1174 ## COG1122 ABC-type cobalt transport system, ATPase component + Term 284844 - 284881 -0.1 269 135 Op 1 . - CDS 284767 - 285984 1293 ## COG0438 Glycosyltransferase - Term 285993 - 286024 1.6 270 135 Op 2 . - CDS 286035 - 286454 350 ## HMPREF0675_3199 DoxX protein - Term 286962 - 287008 17.2 271 136 Op 1 1/0.100 - CDS 287021 - 288028 904 ## COG0167 Dihydroorotate dehydrogenase 272 136 Op 2 . - CDS 288052 - 291666 3200 ## COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit 273 136 Op 3 . - CDS 291682 - 293469 1470 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases - Prom 293640 - 293699 2.1 + Prom 293605 - 293664 2.9 274 137 Tu 1 . + CDS 293748 - 294065 227 ## COG0011 Uncharacterized conserved protein + Term 294269 - 294321 2.1 275 138 Tu 1 . - CDS 294087 - 294860 522 ## COG2186 Transcriptional regulators - Prom 295072 - 295131 4.3 + Prom 295058 - 295117 5.0 276 139 Op 1 4/0.033 + CDS 295243 - 296931 1778 ## COG1620 L-lactate permease 277 139 Op 2 17/0.000 + CDS 296986 - 297780 660 ## COG0247 Fe-S oxidoreductase 278 139 Op 3 13/0.000 + CDS 297784 - 299325 1281 ## COG1139 Uncharacterized conserved protein containing a ferredoxin-like domain 279 139 Op 4 . + CDS 299322 - 300002 657 ## COG1556 Uncharacterized conserved protein 280 140 Tu 1 . + CDS 300070 - 300390 186 ## HMPREF0675_3210 ABC transporter, ATP-binding protein + Term 300436 - 300480 -0.5 281 141 Op 1 . - CDS 300348 - 300545 212 ## gi|313764827|gb|EFS36191.1| conserved domain protein 282 141 Op 2 . - CDS 300565 - 301614 462 ## Arch_1539 hypothetical protein 283 141 Op 3 14/0.000 - CDS 301700 - 303304 1405 ## COG4987 ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components 284 141 Op 4 5/0.033 - CDS 303301 - 304614 174 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 - Term 304884 - 304928 11.4 285 142 Op 1 31/0.000 - CDS 304945 - 306018 1157 ## COG1294 Cytochrome bd-type quinol oxidase, subunit 2 286 142 Op 2 . - CDS 306031 - 307551 1575 ## COG1271 Cytochrome bd-type quinol oxidase, subunit 1 287 143 Tu 1 . - CDS 307751 - 309256 1170 ## COG0531 Amino acid transporters 288 144 Op 1 35/0.000 - CDS 309367 - 311367 1468 ## COG1132 ABC-type multidrug transport system, ATPase and permease components 289 144 Op 2 . - CDS 311364 - 313100 229 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 290 144 Op 3 . - CDS 313182 - 313373 75 ## gi|313764815|gb|EFS36179.1| hypothetical protein HMPREF9567_00452 + Prom 313283 - 313342 1.7 291 145 Tu 1 . + CDS 313372 - 314481 754 ## HMPREF0675_3220 DNA-binding protein 292 146 Tu 1 . - CDS 314688 - 315197 278 ## gi|313764814|gb|EFS36178.1| hypothetical protein HMPREF9567_00451 293 147 Tu 1 . + CDS 315330 - 316862 1589 ## COG1190 Lysyl-tRNA synthetase (class II) + Term 317084 - 317122 0.0 294 148 Tu 1 . - CDS 316901 - 317182 310 ## HMPREF0675_3223 hypothetical protein 295 149 Tu 1 . + CDS 317304 - 318134 535 ## COG3879 Uncharacterized protein conserved in bacteria 296 150 Tu 1 . - CDS 318225 - 320039 1392 ## COG0515 Serine/threonine protein kinase Predicted protein(s) >gi|302034494|gb|GL383257.1| GENE 1 166 - 1173 670 335 aa, chain - ## HITS:1 COG:PH1519 KEGG:ns NR:ns ## COG: PH1519 COG1522 # Protein_GI_number: 14591302 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Pyrococcus horikoshii # 3 132 6 138 151 62 26.0 1e-09 MYEELDRRLVNVLQIDPRASWAKVGKVLGVSPTTVAHRWQRLVDDGIAWITACPNLNQQM TAIVEVDCHTESLPQVIKTLCANPMIVSIDETTGDRDLLLTVVAPDLPTLSDMVIDWIGG LRGVHGSRSALVTSVVIGSNSWRIDALSKTEKILARGPRPGELWMLPPDDLDRELAQSLA VDGRTSATSLARTLDVPASTLHRRLQKLLTNRQIELRCDVAELGGWSLECTWTATIPLNH KTRVLELLRQQSGLRSCMWITGSNNLRVNFRVERQNGIGMIESAVAEAIPGLAPAETIVY MRSHKSMGWVLDRDGRTTGEFVCPPLIGAFERADH >gi|302034494|gb|GL383257.1| GENE 2 1467 - 2510 951 347 aa, chain + ## HITS:1 COG:AF0634 KEGG:ns NR:ns ## COG: AF0634 COG3804 # Protein_GI_number: 11498242 # Func_class: S Function unknown # Function: Uncharacterized conserved protein related to dihydrodipicolinate reductase # Organism: Archaeoglobus fulgidus # 10 332 4 300 308 129 31.0 8e-30 MTATNPIRVVQWGLGAMGQGMAKLITAKDGLELVGAIDVNPALDGKDIGEVLGIDPLGAN VTTDPASILDSNKVDVVTIATTSWVHDQIADLRTIITAGINVVSIAEEMSCPEAQNPDMA KELDELAKKHGVSAVGVGVNPGFVLDHLVVALSSGSQDVTHIEARRVNDLAPYGQTVLRT QGVGTTPEEFKAGVADGSIVGHVGFPESIRLISDALGLGVDSIEQHIEPIIAKVARPARD RTVEPGQVAGCNHTAVGRREGEEVIRLIHPQQVAPEAEGQETGDFITITGVPDISMSTGP EIAGGKATAGICVNTIPRIVAATPGLKRIIDLPSPCALMGPSAYERR >gi|302034494|gb|GL383257.1| GENE 3 2522 - 2869 218 115 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5354 NR:ns ## KEGG: HMPREF0675_5354 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 115 1 115 115 211 100.0 7e-54 MADISHTAPLADSPIPKGTWVEVRTIILQPSERAAAVPEDTAATPLVQWVSGFLDEEAHI GDEVTITSIIGRRHTGVLDCVNPSYSHSFGNTVPELLTIGTTHEPITFHGQEDQS >gi|302034494|gb|GL383257.1| GENE 4 2866 - 4287 1230 473 aa, chain + ## HITS:1 COG:MA1610 KEGG:ns NR:ns ## COG: MA1610 COG0498 # Protein_GI_number: 20090468 # Func_class: E Amino acid transport and metabolism # Function: Threonine synthase # Organism: Methanosarcina acetivorans str.C2A # 50 250 61 245 405 60 26.0 7e-09 MSNSYDDVMARRSDIMRRALALDYDSFQHGDLIFDYDALMSSTGYSLDDVARIQAETKVG DTPLYELHRLTEAVREIAGPGKGARILLKDEAANASGSFKARRASLSAHEAQAKGFAGMV TATSGNYGAGVASQAAQRALACIVIQEIYDSQHVGQPEIVEKSRACEAYGAEVIKLTVGP ELFYVLLRTLEDTGYFNASLYTPYGIAGIETLGAEIGREVQQRYGRQPDAVVVTHAGGGN ITGTTRGLRKMGCDQTQVIAVSVDLTGLHMASDHDFNNKSFTTGHTGFGVPFATWPDRVD VPRNAARPLRYMDGYQLVSQGEVFYMTELLTKIEGLERGPAGNTSLTAAVAMARQMDRDQ IVVVQETEYTGAGKHHNSQLSFARSRGIEVRRGDPAGNVPGKAIVIPERLDQVSVHPLDL DKLRHSYLRHASQIVAPEQWGDAELEFLAAETNTTTDDVRLIGTELATRTKGA >gi|302034494|gb|GL383257.1| GENE 5 4287 - 4709 346 140 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5356 NR:ns ## KEGG: HMPREF0675_5356 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 140 1 140 140 223 99.0 1e-57 MSNPDQERVERYEALRTELADLDDAALKERFWQLCEEVMTPVVDLARTHTTPSIERSVLL RMGIDSVTTHAVVENVFAAGLGGKGAGHAVLRLSRRDGIGLRDAATRIAEDPKALDELFD GSRLPPAKTPTTDSKEGASA >gi|302034494|gb|GL383257.1| GENE 6 4706 - 6667 1746 653 aa, chain + ## HITS:1 COG:no KEGG:PPA2280 NR:ns ## KEGG: PPA2280 # Name: not_defined # Def: D-ornithine aminomutase E component # Organism: P.acnes # Pathway: not_defined # 1 653 1 653 772 1353 100.0 0 MTIQDTCLHHKHTREREQLGPNNKSAVTPSEPVEPRTEQDLPGPNTKLNVEEILTDLEHY HPRRKGWTWRNVPEEGIDMGDFHYRNMSTPLKQSMPLPAAEYFENIDPQPAPVVTSEIAS GHFEDDLRRMRMAAWHGADHIMVIRTTGQSHIDGLLEGTPEGIGGVPITRKQLRASRKAC DLIEDEVGRPINFHSYVSGVAGPEVAVLFAEEGVNGAHQDPQYNLLYRNINAYRSYVDAG EAKKAMAGAQIFQIDGAHNANATARHGWKVMPELMVQHGLNCMYSVLVGMPKDLIGLSTV PPSAPPAPKLWYDLPYAVALRDLFSEYKMRAQQNTRYIESDLAEAIRTHTIDTLISMLTS ADIQSTITPDEGRNLPWHHNSVRGVQTVKQTWAALDGIKEMVTINREGPLGHMVRDLKER AIGFLTEMLHVGGYFVAVEDGFFVDSAEFPERNHDGIARDGQGGIAEGTVVERDPDYLAP VCDHFGNNNLPEGLNKPCDLIDGCTLCKPEKIVYIDELDPNDSAATRLACTRPFRDGTAL RPEAEWAGDGVVLVQMNIPGSEDIAREAAVEMARKMGITDPQVCNLQVLHPAEGCFVEVK GQATHVDVNPSKLTIPEKIELLPADELRQFVTDHELSVVAGTVGEDEHSVGLR >gi|302034494|gb|GL383257.1| GENE 7 6749 - 7024 346 91 aa, chain + ## HITS:1 COG:FN1862 KEGG:ns NR:ns ## COG: FN1862 COG5012 # Protein_GI_number: 19705167 # Func_class: R General function prediction only # Function: Predicted cobalamin binding protein # Organism: Fusobacterium nucleatum # 2 85 173 256 263 65 38.0 3e-11 MVDAAIESGADAILISTIISHNDIHRTMMRKLADLATEKGIRDKVVLVAGGTQVNREMAA ETGLDATFGRGTKGIDVLDAIVRTMRTHAEA >gi|302034494|gb|GL383257.1| GENE 8 7030 - 8460 964 476 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5358 NR:ns ## KEGG: HMPREF0675_5358 # Name: not_defined # Def: putative reactivating factor for D-ornithine aminomutase (EC:5.4.99.1) # Organism: P.acnes_SK137 # Pathway: not_defined # 1 476 1 476 476 846 99.0 0 MTVLTTLEIGSTITKANAFRMESGLLHHIGQGFAPTSVAAGDVRIGADAAIAQMREQCAS PPAAGEIFVNSSAAGGLRMSVHGLTRSMTARAAREAALGAGAIVTMTTVGAMDEFDLEDL QENRPSIILLAGGVDDGEKRIVVENAKVIASAQLGVPVVYAGNSRVRRRVEHIFVDAGQP LTCVDNVFPDVDVLRVEPVRAVIHDVFNDHITAAPGMHGLVELTNHEILPTPRAVLLATE LFADAVGDAVVVDVGGATTDVHSVTDGSSEWSARVIDPEPRTKRTVEGDLGVFVNARRVA AMTDEGEDEECLEWLRAIPSDEREAEVTRWLAREAVEAGVGRHAGTVTEIFTPTGKTQVV RGKDLSAVRWVVGTGGALTRVPGGADILRRICTGAGAQLLPSPEATIVIDRDYRFSALGT VSQCYPDEVRRTFAAWIESLTGNTKLPSDEGVGVNDDAAPPDVTKNDTPHGLESTS >gi|302034494|gb|GL383257.1| GENE 9 8457 - 9545 861 362 aa, chain + ## HITS:1 COG:mlr5700_1 KEGG:ns NR:ns ## COG: mlr5700_1 COG3457 # Protein_GI_number: 13474743 # Func_class: E Amino acid transport and metabolism # Function: Predicted amino acid racemase # Organism: Mesorhizobium loti # 4 352 2 351 351 266 41.0 6e-71 MNRSTPRLEIFADRIRDNARAIVTQCAKHGVQVAAVTKVLHAHPVLLQALEDTGITMLAD SRLQNLRQIAECGTSLPTMLLRAPGRHDIDDTVQLADISLNSSLTTMTALSEAAVRAGTR HGVIVMVDVGDLREGVWPDHLVDVVSSAAALPGIDVKGVGTNLACYGGVQPSVENMTRLV QLRDMARAATGLELGLISGGNSANLPLMMSGAMPSEINNLRIGEAIILGRNTLDRSPWPQ TRQDTVEVVAEIIELERKPSIPLGRTGEDAFGQHVTFTDRGIRLRAICNLGRQDVNPSDL APVDPGNIVLGASSDHLIVDMTDSSESVEIGTEVRFWPTYAGLLATATSSAVWKAAATPH RL >gi|302034494|gb|GL383257.1| GENE 10 9584 - 11059 1182 491 aa, chain + ## HITS:1 COG:ECs5186 KEGG:ns NR:ns ## COG: ECs5186 COG1113 # Protein_GI_number: 15834440 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Escherichia coli O157:H7 # 29 474 10 454 470 514 58.0 1e-145 MSARETQSVDTPRRSALARPVKKPPATLDLESPTEERELQRGLTNRHLQLIALGGAIGTG MFMGSSSTIHLAGPSSALVYALIGFFLYFMMRALGEMLLSNLNYKSFRDIAEDLLGPAGG FIAGWTYWFSWIVAAMGDMAAITAYFQYWWPNIPKWLPATALAAVLLALNIIAVQFFGEA EFWFALIKLIAVGALVIVAIALLASRFVSPDGDPATIANLWNDGGFFPNGLMGFLGGFQI AFFAFVGIELVGTAAAETKDPCTTLPKAINAIPVRLALFYVFALLAITAVIPWRKVVPGV SPFVSLFGLAGFGAAASVMNFVLLTAAASSDNSGLYSTSRMMYGLALDGQAPSRFRKLSS NNVPRNALVASCLLLLSGITFLYTSDSIMQAFALVTTVAALLFLFTWSLIVVCYIVYRRK RPQLHEESIYKMPGGVPMCWVVLAFFTISLVILTLDPTTRIAVLITPIWFAFIGSMYFVH HRHEQRKEALR >gi|302034494|gb|GL383257.1| GENE 11 11423 - 12937 1009 504 aa, chain + ## HITS:1 COG:ECs5186 KEGG:ns NR:ns ## COG: ECs5186 COG1113 # Protein_GI_number: 15834440 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Escherichia coli O157:H7 # 40 483 16 459 470 519 60.0 1e-147 MTGFNQIPDRERYPHALASNEHRGLTAQEPESSPSSPHPEAHLHRNLNNRHIQLIAIGGA IGTGLFLGSGKAIRAAGPSIIVSYLIIGTMLYFVVRAMGELLMYNLDYKSFQDFAADLIG PWAGFFLGWTYWLCWIVTGMAELIGITTYWDFWVKNRGTAALLAAATLFLLLCLNLLTVR MFGELEFWFALIKIIAIISLIVLAIVLAVMKFQFPSGSMASVANLWNRGGFMPNGWSGFF AGFQMAAFAFVGIELIGTTAAETRDPEKTLPRAISAVPARILIFYVGALLAIMTAVPWDE VRADSSPFVQVLGLVGFAGAASVMNFVVLTSAASSSNSGIYSISRMLFGLAHKRMAPKVF GGLSKNGVPRWGLVITVLVLSTALLLAASESFVEAFTLVTTISSVLFIFVWSMIVISYMK YRRVAPAAHAASKYPMPGGRGMCWAVLVFFVFVLVLLAQEADTARALALTPIWFVILGVG WFFDRHHATHDDVGTDEAHPKGDS >gi|302034494|gb|GL383257.1| GENE 12 13164 - 14291 731 375 aa, chain + ## HITS:1 COG:CAC0492 KEGG:ns NR:ns ## COG: CAC0492 COG0787 # Protein_GI_number: 15893783 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Alanine racemase # Organism: Clostridium acetobutylicum # 1 373 1 374 386 255 38.0 1e-67 MPRCPSPSHAIIDLSAIAANLAVVRKRAGDRKVLFAVKADAYGHGAVEVSRYVEKHRYAD WLAVATVAEGQELVEAGITLPILKLSPADPWDMDAAITSGIRLTVVDFDTLEAVSKAAVR LGITAKIHIAVDSGMGRIGLRPECLAELTAAADRAKGVEVEGVFTHLPISDVPEGAEFTR REIDTFMTAVSLIETHRGPFPLVHLANSGAILGHDLGKTSMVRAGIVGYGYDPNPHADRA DLHPALSWISHVTFVKTVSVGDTIGYGRTWTASETTKIATVPVGYADGLSRGLSNKGHVL IRGSVHPIVGRICMDQFMVDLGPDSNVTVGDEVVLIGTQEDETLTADDMAELLGTISYEI TCAISKRVDRYWVGQ >gi|302034494|gb|GL383257.1| GENE 13 14481 - 15905 1056 474 aa, chain - ## HITS:1 COG:VC0611 KEGG:ns NR:ns ## COG: VC0611 COG1109 # Protein_GI_number: 15640631 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Vibrio cholerae # 5 467 2 464 470 501 51.0 1e-142 MADEIEFGTGGWRAIIADTFTRLNVERVAQALADRIHDENQEHRPVVIGYDQRFLSPEFA WWAAEVLAGNDIVVRIIDRPAPTPMIMWTVRDLGCAYGMAVTASHNPATYNGLKVFTEGG RDAKVEITEPIQHRANSISPKDIRRVHRTDALRDGVIEVQTSMNWYIDAILDHVDLEAIR HAHLKVVLDPMFGVSRTCLQTILMTARCDVDTIHERRDTLFGGRLPSPNSRTLQTLAQEV VERGADIGIATDGDADRLGIIDDQGHFLHPNQILVLLYTYLLEDKGWQGPCVRNLATTHL LDRVAEAHGQTCYEVPVGFKWVSSKMAETNAVIGGESSGGLTVQGHIAGKDGVYAGTLLV EMIAKRGKKLSQIYADIEERYGRLEMVEDDFSFAPEDKEYLKRRIYQDKDLPDFGLEVDH ISDMDGVKVYFANGGWIIVRFSGTEPLLRVFCEMPVAQMARECIDKVVKHYHFE >gi|302034494|gb|GL383257.1| GENE 14 16022 - 17212 727 396 aa, chain - ## HITS:1 COG:ECs0785 KEGG:ns NR:ns ## COG: ECs0785 COG0153 # Protein_GI_number: 15830039 # Func_class: G Carbohydrate transport and metabolism # Function: Galactokinase # Organism: Escherichia coli O157:H7 # 7 360 26 350 382 82 26.0 1e-15 MTRWFVPGRIEVLGKHTDYAGGSTLVAAVDRGVTISIEPGDSGITVSTDAAPGELSLAAG HDPKLPAGHWGRYAQAVVDRLAANFGDLAPARIRLTSDLPLASGMSSSSALVSAIVLGLA DFNGLPDTRTWQDNITDDADLAGYLACHENGMTFKNLVGAAGVGTFGGSEDHTAMVCSKD GQLGQFRFCPIRLQQRVPFPEDMSFVVIVSGVAAEKTGAARDLYNAASLATREIIERWNS TTGREDAVLGDALVADPNAEKLHEVVSDRADLTRRLDHFLTESESIIPEASKALACGDLE RFGRMADESQRAAEDLLGNQVPQTSALARIARELGATGATSFGAGFGGSVWALVPNAEAP EFASTWLGKYRDEYSEEAGQAVTVVTRPGPSARRLD >gi|302034494|gb|GL383257.1| GENE 15 17209 - 18045 791 278 aa, chain - ## HITS:1 COG:VNG1055G KEGG:ns NR:ns ## COG: VNG1055G COG1209 # Protein_GI_number: 15790155 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-glucose pyrophosphorylase # Organism: Halobacterium sp. NRC-1 # 13 273 2 239 240 91 26.0 2e-18 MTHDPVAQTAPHKVVIMARGLGTRMRKSVEGVSLTADQAAAASAGVKAMISLDDRPFLDY VISALADAGFDEFCLVIGPEHNVIRDYYDACEKSRLSIVYAVQEHPLGTADAVAAAEEFA GDDRVLVVNSDNFYPEDAVARLREVPASGTLGFTKRAMIAQSNIDPERIRAFALLDSDDS GQLTDIIEKPDPHIVDAAGETALVSMNCFLLTPRIFEACRSIDKSERGEYEIVDAVRWMV EHGEHFDVVPVESGVLDMSNRGDITSVVEALSSREVKL >gi|302034494|gb|GL383257.1| GENE 16 18100 - 18225 61 41 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MCVLACDFLPEVPLLPVTMSLGYVIDVSPDGRVEMEKDHLR >gi|302034494|gb|GL383257.1| GENE 17 18170 - 18997 234 275 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5366 NR:ns ## KEGG: HMPREF0675_5366 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 275 1 275 275 460 100.0 1e-128 MVTGSNGTSGKKSQASTHTWAILFFLALIVVMRHSALGALLSLVVVMTIIMWVVQRQKAQ AKRVKNGGHHESTSDKQNLGNLNPNPTDDKKVIERRPRSSANRADSFSASPDKGLFGGSF AALTDALPGNVDEPGKHIEPAQPQQHHPAPERGSSQHHAYAPRPSHQPPDSVSFHDPESL RPEISRPGVEPATKPASRVLAPAPPIKTTAPAPAVTQKAASTAAPAKIARGSRFDDNRGG SAAISMTRESATTSLHEVPEYNGSCLSTSSLFAQQ >gi|302034494|gb|GL383257.1| GENE 18 19191 - 20093 230 300 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5367 NR:ns ## KEGG: HMPREF0675_5367 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 300 1 300 300 540 100.0 1e-152 MELVDILEANGGVAKISSVGRVARQARRAAREGYVIRPLPRIVMTAMAARHPEAWMRAVR LWRPSAIFTGRAALYLAGMRDLKMTEIDVIVPHSMPRCSRRPWLRFHRAGSEPVIEDRYG VRTTCAYTCFWLALRGDWEAATECLRKGYVATEDLRGVRPKLARKAPSSVVRRVLRQLLD RPWSVAEREIHALFRRHRVSGWKANERLWIDGNAVFPDLWFKKENVVVEIDSYAFHGRPA DYEATARRHALLVGAGLRVIRVTPNMIRDNPELVLDTVRSALWGRHRGVVAAARSGKSGL >gi|302034494|gb|GL383257.1| GENE 19 20343 - 21749 1165 468 aa, chain + ## HITS:1 COG:DR2627 KEGG:ns NR:ns ## COG: DR2627 COG0114 # Protein_GI_number: 15807607 # Func_class: C Energy production and conversion # Function: Fumarase # Organism: Deinococcus radiodurans # 1 463 1 463 464 689 75.0 0 MAEMRIEKDSMGEVEVPAEHYWGAQTQRSLHNFEIGRDTFVWGRDMIRALGTLKKSAALA NKELGELPGDVADLIVQAADEVIAGKLDDEFPLVVFQTGSGTQSNMNTNEVISNRAIELA GGERGSKKPVHPNDHVNRGQSSNDTFPTAMHIAVVCALNKRLYPAVQQLRDTLDEKAKKY DDVVMVGRTHLQDATPIRLGQVISGWVAQIDFALDGIRYADSRARELAIGGTAVGTGLNA HPDFGPTVAKHATEETGIEFKQADNLFAALSAHDALVQVSGSLRVLADALMKIANDVRWY ASGPRNGIGELLIPENEPGSSIMPGKVNPTQCEAMTMVATRVFGNDATVGFAGSQGNFQL NVFKPVMAHACLESIRLIADSCISFDKHCAYGIEPNPDKIKENLDKNLMQVTALNRHIGY DLASKIAKNAHHKGISLRESALTVGGMSEEDFDKWVVPADMTHPSAAE >gi|302034494|gb|GL383257.1| GENE 20 22077 - 22988 803 303 aa, chain - ## HITS:1 COG:SP1681 KEGG:ns NR:ns ## COG: SP1681 COG0395 # Protein_GI_number: 15901516 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 51 303 30 279 279 137 31.0 2e-32 MAHGKTAVTKDGIPYRPSLDGLPPRSIAPSKAARTITWVILAVVACYFLLPIIWLVIAST KNNTDLVSTSGFAFGEFNWAANWHSLMAWTKGMFPRWVLNSLLYSTVSGVVGTLISVSCG YVISKFRFPGRRVLLVVIMVGLLMPVALLTVPLYLLFIKMHLVNIMWAMIIPSMVSPFGV FLGNVYADSSVPMELLEAARIDGAGELRIFSTMVLRLLAPAMVTIFLFIFVATWNNFLLP LMMITDENLQPVTQGLYGMMAYFAPDKGAVMLASVIGVVPLVILFLVLQRYWQSGLAAGA VKG >gi|302034494|gb|GL383257.1| GENE 21 22990 - 23883 589 297 aa, chain - ## HITS:1 COG:XF2447 KEGG:ns NR:ns ## COG: XF2447 COG1175 # Protein_GI_number: 15839038 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Xylella fastidiosa 9a5c # 7 238 2 236 293 111 32.0 2e-24 MASRKARHEALTGWLFALPFTIVFIIVFVAPIIESIRAGFHKQVAEGGGLYGGGRTVEKF VGLENFQDVCTNPAFWHGIGRVMLFGVFQIPIMILAALFLALVIDSYLVRHLGFWRLSYF LPYAIPGLVAAIMWAYLYVPEISPFAGHLNFSLLSSHVILASMANMTTWTFTGYNMLIFL AALQAIPSDLYEAARIDGASGWEIMTKIKIPMVRGAAMLAVLLSIIGTVQLFNEPTVLAT VATWMPRDYTPMMMAYNTMNGNISPSGAGPASAVSIMMALVAGVLAMIYALVQRKAD >gi|302034494|gb|GL383257.1| GENE 22 23777 - 23983 82 68 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLSMMGATNTMMKTMVNGSANNQPVSASCLALRLAIVDEDMPTPVKNCHGADLPAPFGDH GDRRGLRQ >gi|302034494|gb|GL383257.1| GENE 23 24121 - 25455 1218 444 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5372 NR:ns ## KEGG: HMPREF0675_5372 # Name: not_defined # Def: bacterial extracellular solute-binding protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 444 1 444 444 748 99.0 0 MITRRTRRMASVAAIVAGTLVLGACGSSSGGSGSPGKAASQSAAASGPVTIKYLHRLPDG EGMTKVADIVKKWNSEHPDIKVEATKFPGKANELMPKLEADVKAGTAPCLVQSGYSEVPD MYVKGLVQDVTNEAEKYKGHFSGAYGQMSVGGKVVGLPQDTGPLVYVYNEAEFKKLGIGV PKTSSELLSSAKKAAAKGKYILGFEPDEAQNWLSAQAAAAGAVWYSAEGDKWKVDTNGDK SKVVADFWQKALDDESAVTDARWSDAYTKDLVSGKLIGNIVAAWETGFMLDALDKTSYNG QWRVVQLPSFGGSDMTGPDGGSGVAVVKGCKYPAQAMQFNDWFNTQVNDLATQGLVPAAK GQVTTPEKMKKQFGGQDVMAELAKANERLAPKFGYIPGFTVVGTKMNEKGAGAAAGKAKV GDIFQTAQDTSVQALKDAGLPVNG >gi|302034494|gb|GL383257.1| GENE 24 25654 - 26661 579 335 aa, chain + ## HITS:1 COG:BH3692 KEGG:ns NR:ns ## COG: BH3692 COG1609 # Protein_GI_number: 15616254 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus halodurans # 9 334 3 332 337 152 30.0 7e-37 MSAETGRPTMHEVARVAGVSHATVSRVLNGHTNVAPATARAVADAIITTGYVPNRAARSL RVQSTDTVVLVAREKADVFYSEPTLSPMASGANLRLSEHGYQMLLALVDSSRSAERVGSL IAGGSFDAAILVAMSNDDPLIARLMATNTPLVTSSTPFPGFDIPSADTDNVGGSRAITAR LVATGRSKLVAIGGPSWAPVTQLRLDGFHQGAKNAALGHTTVNEWTLTAGKRAMRELLEL HPDLDGVVAASDLLAAGATRALNEVGRRVPQDVGVVGFDDAPIAALNDPPLSTVRSDARA TGIALADMAIAQIRGQELPQPHLLLPNEVVWRESA >gi|302034494|gb|GL383257.1| GENE 25 26670 - 27362 506 230 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5374 NR:ns ## KEGG: HMPREF0675_5374 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 230 1 230 230 427 100.0 1e-118 MSDENVSPAARLPDGDELTAERPLDPQDLPEHLAEPTQMPSTGPQVAQAVVEAVGGTPRA DGMVDAAEEVRIDVLAFADAPAPGWSTWSTVSLHAEPNAVALVDGTSSDIRAELMVVGAP GSDVMGKVLGSCAFAVLRDHWSMAPGIVFGDVVSMYAPNSTTPHLMWCHPFTTPQLDQVD IGDMKVHWLLGVPITEAERQWLEANGFDVFVELLDAKAVNYTDLQRPSVV >gi|302034494|gb|GL383257.1| GENE 26 27322 - 27537 104 71 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|327334474|gb|EGE76185.1| ## NR: gi|327334474|gb|EGE76185.1| hypothetical protein HMPREF9344_00337 [Propionibacterium acnes HL097PA1] # 5 60 1 56 56 73 75.0 5e-12 MWMSVSHVHTSDFSGGMVSLRGRVQAVDVLSVTLPPSHVGQENPRPGHARAINVTGSMYE RRKRLPSSTPS >gi|302034494|gb|GL383257.1| GENE 27 27488 - 28345 768 285 aa, chain + ## HITS:1 COG:all1413 KEGG:ns NR:ns ## COG: all1413 COG0668 # Protein_GI_number: 17228908 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Nostoc sp. PCC 7120 # 65 281 292 510 536 117 31.0 2e-26 MPPLKSDVWTWDTLIHIAIIIAVAIIARWLLRKGVDWTIHLMVSRSEKREATMPGRTRRI LAEATGASIDRQNQRTATVGGLLSNVGVTIIIIVALLSGFSTIGFKITPILTSAGIVGVA LAFGAQTLVKDVLAGLFIIFEDQYGVGDAVKINEVEGLVEDVGLRVTRIRDWNGAAWYLR NGEITKVGNVTQGWTTSFTDINVHALEDPNQVIRVIRKVLDNLEVEFEGTLLDKPLVLGV GDITGDTMTFQVMTKCIANQHNNVLRALRRECKDAFDAARIRRVF >gi|302034494|gb|GL383257.1| GENE 28 28515 - 29723 807 402 aa, chain - ## HITS:1 COG:BS_yxaA KEGG:ns NR:ns ## COG: BS_yxaA COG1929 # Protein_GI_number: 16081056 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerate kinase # Organism: Bacillus subtilis # 30 352 3 324 382 207 42.0 4e-53 MVIKMGEPVSSHDMVACHAETMRPDPNAPVVVAVDSFKGSLSSGKACRAVRRGFSAADPD REVITIPVADGGEGTVEAVLAAGCHAVTVKCHGATGDLAEVDYAMRDRHAVIEMATCCGL ERADRVSGRPTPRRGLVASSRGLGEVIAAALRKGATDITVGVGGSASTDGGAGMLEALGV RLLDKNLAPISPGAAGLTELTRLDLSGLNRKLSGVELTVACDVTSPLLGPEGAAAVFGPQ KGLDHEGIAIAEAGLTRLADLMEPAIGSTYRDDPGSGAAGGVGWALRCLGAKYRPGAAAM LGWAKAVSKISGAGLVVTGEGRLDRQTLLGKLPDTIRKIALDAGVPVWAVCGRCDLPEEK RRVFERIICLSDIEPDVEASMAQAGPLLSRAVEQAVREELGR >gi|302034494|gb|GL383257.1| GENE 29 29774 - 30028 221 84 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5377 NR:ns ## KEGG: HMPREF0675_5377 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 84 1 84 84 121 100.0 8e-27 MSALFVTTRKLGVMVNRAYLSLSVLALVLWVAAYRHLPGWAAGITLACIVLFSLFCEWSR VRTLARIGKSRGTAAQSSRGRKLS >gi|302034494|gb|GL383257.1| GENE 30 30134 - 31633 1153 499 aa, chain + ## HITS:1 COG:ML2697 KEGG:ns NR:ns ## COG: ML2697 COG0617 # Protein_GI_number: 15828457 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA nucleotidyltransferase/poly(A) polymerase # Organism: Mycobacterium leprae # 38 497 20 480 486 503 57.0 1e-142 MPEKNINSTTMLPAALRPTPDESGMTVPQLLEHRINALFEQIPLVAELGEAFAQAGHDLY LVGGSVRDALMGRLGHDLDFTTDARPDDTEAILRQHTHATWDIGRAFGTIGAQIDDWVVE VTTYRADAYHPDSRKPEIVYGETLKDDLIRRDFTVNAMALHAATRTFSDPYAGLTDIVSG ILRTPFPPERSFSDDPLRMMRAARFTSQLGFTVTNEVRAAMTDMASRIEIISAERVRDEL SKTLLTDHPREGLDLLVTTRIADYVLPELPALSLERDEHHRHKDVYEHSLTVLDQSIDLE KRRGHDPDLTGRLAALLHDIGKPSTRKFEPGGKVSFHHHDIVGAKMARKRLKALTYPSQV VKEVSKLVELHLRFHGYGDQGWTDSAVRRYVRDAGDQLERLHILTRSDCTTRNRRKAERL EFAYDDLEARIANLTAKEELAAIRPDLDGQQIMAILGIKPGPEVGKAYKFLLNLRLDEGP HTPDEAKNALLAWWATQDR >gi|302034494|gb|GL383257.1| GENE 31 31630 - 31854 118 74 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313765088|gb|EFS36452.1| ## NR: gi|313765088|gb|EFS36452.1| hypothetical protein HMPREF9567_00727 [Propionibacterium acnes HL013PA1] hypothetical protein HMPREF9574_02643 [Propionibacterium acnes HL074PA1] hypothetical protein HMPREF9580_01801 [Propionibacterium acnes HL087PA2] hypothetical protein HMPREF9585_00194 [Propionibacterium acnes HL083PA1] hypothetical protein HMPREF9587_00671 [Propionibacterium acnes HL025PA1] hypothetical protein HMPREF9589_01500 [Propionibacterium acnes HL059PA1] hypothetical protein HMPREF9593_01955 [Propionibacterium acnes HL046PA2] hypothetical protein HMPREF9604_00917 [Propionibacterium acnes HL036PA1] hypothetical protein HMPREF9605_00031 [Propionibacterium acnes HL036PA2] hypothetical protein HMPREF9612_00741 [Propionibacterium acnes HL063PA2] hypothetical protein HMPREF9616_00109 [Propionibacterium acnes HL007PA1] hypothetical protein HMPREF9617_02120 [Propionibacterium acnes HL056PA1] hypothetical protein HMPREF9597_00454 [Propionibacterium acnes HL005PA4] hypothetical protein HMPREF9598_01952 [Propionibacterium acnes HL050PA1] hypothetical protein HMPREF9600_00040 [Propionibacterium acnes HL050PA3] hypothetical protein HMPREF9606_00896 [Propionibacterium acnes HL036PA3] hypothetical protein HMPREF9608_01884 [Propionibacterium acnes HL067PA1] hypothetical protein HMPREF9609_01573 [Propionibacterium acnes HL027PA1] hypothetical protein HMPREF9613_00320 [Propionibacterium acnes HL002PA1] hypothetical protein HMPREF9614_00575 [Propionibacterium acnes HL002PA2] hypothetical protein HMPREF9620_00933 [Propionibacterium acnes HL037PA1] hypothetical protein HMPREF9564_00098 [Propionibacterium acnes HL053PA1] hypothetical protein HMPREF9566_00385 [Propionibacterium acnes HL045PA1] hypothetical protein HMPREF9594_00837 [Propionibacterium acnes HL005PA1] hypothetical protein HMPREF9595_01624 [Propionibacterium acnes HL005PA2] hypothetical protein HMPREF9596_00286 [Propionibacterium acnes HL005PA3] hypothetical protein HMPREF9615_00849 [Propionibacterium acnes HL002PA3] hypothetical protein HMPREF9583_00137 [Propionibacterium acnes HL038PA1] hypothetical protein HMPREF9590_02503 [Propionibacterium acnes HL059PA2] hypothetical protein HMPREF9592_00966 [Propionibacterium acnes HL046PA1] hypothetical protein HMPREF9602_01320 [Propionibacterium acnes HL030PA2] putative DNA-binding protein [Propionibacterium acnes HL096PA2] hypothetical protein HMPREF9568_01798 [Propionibacterium acnes HL013PA2] hypothetical protein HMPREF9571_01352 [Propionibacterium acnes HL043PA2] hypothetical protein HMPREF9570_00338 [Propionibacterium acnes HL043PA1] hypothetical protein HMPREF9581_00366 [Propionibacterium acnes HL087PA3] hypothetical protein HMPREF9586_00627 [Propionibacterium acnes HL083PA2] hypothetical protein HMPREF9579_00437 [Propionibacterium acnes HL087PA1] hypothetical protein HMPREF9563_00673 [Propionibacterium acnes HL020PA1] hypothetical protein HMPREF9588_00537 [Propionibacterium acnes HL025PA2] putative DNA-binding protein [Propionibacterium acnes HL099PA1] # 1 74 15 88 88 109 100.0 7e-23 MGVLGSPVGGVTEVIATLTNPEAVRAWAGDDPVTTVAKTINRPSSQAAGRRREGEGTSVM VVGRPASAVTIRKV >gi|302034494|gb|GL383257.1| GENE 32 31736 - 33817 1135 693 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5379 NR:ns ## KEGG: HMPREF0675_5379 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 693 21 713 713 1183 99.0 0 MVLATVVTGSSPAQARTASGLVKVAITSVTPPTGDPKTPITIKGTVTNTSSVSMTWVQAS FWRSQDEINDTRDLSDLLASPATVPVGMRWFREPKEASIFNITDPEANQTFKPGDTGSFT VTGTPAQMGLTTPNAVYAVGVHVQASPGNQPRRTVGRARVLTVLSDAHTSANLAPVIVLS APPSRRIDGTFTDESLSDDITRRLKPLAEAAHTRNATVLVDPSLIDEVRAMASGYLVAGK GSHTVAGTGQEQAKEWLNLVEPLLSSGRAYRLPYGNADVIGAARQGRSSLLLTVKHAVDP SNPAAHLPLAIIDPAAELDNSSFKTLAKELSPSVILTCAASVRKGVREDFGVKIVGLADT VRTSGHPQSNSDSQRRGMLLSQALLMTRESIPAVTLVTTVNDVQATAPVSWLHLQNLSTI LNGAKPALHLPESHAGNTILKDSWWQIQHDVGVDADGWSDLVGASPETASLTSAKFVSRT LSASLKDREAWATDVMRPASEVIAGNGLVLHSASHFVMSSSRNEFPLTITNSLAQTVRVK VVVTSENPQRIDIPDTQVVAIQPKETQTIKFAPKASSNGVVEMQAHLSTPSGRLLGSQST FVVKATQMDDVGWIIIVVSALVLIIATVLRIRQVTANSQRDTETAARDAKQPATKLDDIS DSTPATPAQQDQEAASSDDSARSSHTDTGDLTA >gi|302034494|gb|GL383257.1| GENE 33 33891 - 35696 738 601 aa, chain + ## HITS:1 COG:CT673 KEGG:ns NR:ns ## COG: CT673 COG0515 # Protein_GI_number: 15605406 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Chlamydia trachomatis # 37 174 15 153 490 61 30.0 6e-09 MSFEDPADRYRDPYDSGSYEMDNLPHLSAGSFLGGRYRLDQEISRPEPSLAWRAFDTKLH RPVLIYALAPHGRRTPAVLDAARRAAVATDSRFLRVLDAVVAGPGEPASWVVSEYAPGKS IEELLETGPLSALEAAWIAHEIADAMAPLHAQGVFHERISPGTVLVTSTGNLKISGLLIE AALHPRPGDISRSWPDREVVDVTDIGRVLYACLVSRWPNGQGHRPFVEPATAMSWGLPPA PTDAHGWLTPREVRAGVSPTLDVLCDQILSRVPHYDEVPLRTANEIAQSLGRTLGSADAA ADLERRIRFPVDQTSQAEKDPWWSDESSASVAPQDPDEPERAKEYGPDEEGYWSPEAAAG EWGRRSGPLPWSGRNDPHITQLPPQDWPNDAEDEPVFTKARPHNRRWPPILVAVTAVVMV VCLIAVGMRHSDSGASQTSSNPTTVKLTHVQEFDPSEDGGDAKENHNQVKFAIDGNPSTA WHTVVYRNSAKLGNLKPGVGLVVDLGRVTKVTSVKVRLVGSGTDISLWEPTHDVSSDQPP MKTIKEWTRVAAVTGAGKIVTLKPSENTKTRHLLVYLTELPAKSATRFQGGIADITVVGS S >gi|302034494|gb|GL383257.1| GENE 34 36046 - 37569 1567 507 aa, chain - ## HITS:1 COG:MT3798 KEGG:ns NR:ns ## COG: MT3798 COG0554 # Protein_GI_number: 15843314 # Func_class: C Energy production and conversion # Function: Glycerol kinase # Organism: Mycobacterium tuberculosis CDC1551 # 6 502 16 515 517 590 59.0 1e-168 MSDEKFVLAIDEGTTSARAIIFNHAGQIMAVGQQEFEQIFPRAGWVEHDPIEIWEAVRDV VGLALTKANINRHQLAAAGITNQRETAVVWDKNTGEPVYNAIVWQDTRTQKICNELAGDK GADRYKEICGLGLSTYFSGPKVKWILDNVEGARARAEAGDLLFGNMDTWVLWNLTGGING GVHITDPTNASRTMLMDVRKLQWDDSMCEVMGIPKSMLPEIKSSSEIYGYGRKNGLLIDT PISGILGDQQAATFGQACFQKGMAKNTYGTGCFMLMNTGEEAIFSENGLLTTVCYKIGDQ PTVYALEGSIAVAGSLVQWLRDNLKMFETAPQIEALANTVEDNGGAYFVPAFSGLFAPYW RPDARGALVGLTRYVNRGHIARAVLESTAFQTREVLEAMNADSGVPLTELRVDGGMTANE TLMQFQADQVNVPVVRPVVAETTALGAAYAAGIAVGFWEGENDVTDNWAEDKRWEPKMDK NERERLFRNWKKAVTKTFDWVDDDVKE >gi|302034494|gb|GL383257.1| GENE 35 37654 - 38406 824 250 aa, chain - ## HITS:1 COG:L0015 KEGG:ns NR:ns ## COG: L0015 COG0580 # Protein_GI_number: 15673226 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) # Organism: Lactococcus lactis # 16 248 11 238 245 187 49.0 2e-47 MLLETAVPGATIFGSEFLGTLILILLGCGVVANNLLPKSKGHANAPGSLQINWGWGFGVM FGVYAAYKTGGHLNPAVTVGLAIAGKDLAPGIPATAGNITIYILAQFAGAFVGAVLCWLA YKQHYDEDCDPALKLGTFATGPEVRNPLWNTITEAIGTWVLVLWVILSGFTQGVKIGPLA VGLLIVSIGASLGGPTGYAINPARDLSPRIAHAVLPIKGKGDSDWGYAWVPVVGPMIGAV LAALTYSIFW >gi|302034494|gb|GL383257.1| GENE 36 38595 - 39542 673 315 aa, chain + ## HITS:1 COG:DR1935 KEGG:ns NR:ns ## COG: DR1935 COG2390 # Protein_GI_number: 15806934 # Func_class: K Transcription # Function: Transcriptional regulator, contains sigma factor-related N-terminal domain # Organism: Deinococcus radiodurans # 14 312 45 345 348 208 41.0 1e-53 MNELSNDVWTAASMYYMQGETMDAIASHLGTSRSTVSRLLKQARLSGVVRITLSEPTGLR SGLDSTLTRMFGVNTTVVPVKSGTTEIHRLDQVARIAGQMVTDMVEDNSAVGIAWGTTLD AITHYVVPKDVKGVSVVQMNGSANPASSGIPYVGSILSRMAAAFGGEVIHFPVPTFFDSA STKAAMWQECSVQAVLKAHRELDLAVFSVGALDSPVPSHVYSAGYMTDEEKANLVHAGVV GDVNTVFLKADGAYDVEFNKRATGLAPFQLQRIPRRLCVVAGRAKAVGLLAALRARVATD LVVDDATARAVLDLM >gi|302034494|gb|GL383257.1| GENE 37 39613 - 41052 894 479 aa, chain - ## HITS:1 COG:Cj1228c KEGG:ns NR:ns ## COG: Cj1228c COG0265 # Protein_GI_number: 15792552 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Campylobacter jejuni # 187 466 104 359 472 176 43.0 1e-43 MGSWTLEVMSESTNGPQEPREPNSFPRASAEGGYSSHSEDARQGWAQESYWSHSDDTRSS SGDSPTTQRQPWESSEQPTAIDPNLGNKNAGSPQPSSRSGRKGFRGGTIVLAALLAAAVG GVSGGLVDRSLTKNDTPAVATKSAAPNTVTKVVQGSSSAPDWTATASAISNSVVSITVTT GNGGGEGSGVVVDSNGDIVTNNHVVSDAASGGQLTVSMGNKTYDAKVVGSDPSTDLAVIR VTNPPESMKPMRFANSSKLTVGAPVMAVGNPLGLSGSVTTGIISALNRPVTTMSRDDSDD VLGSYDSSSGVVVTNAIQTSAAINPGNSGGALVNANGELVGINSSIASLPSADRSQSGNI GIGFAIPSNLAKSVADQIIRTGKVTHAFLGISVRDAAAVKAGVKVRGAGIATVIPSSAAG KAGLRRGDVITRIDDTDIASGESLVGLIRSFKAGQKAKISYIRGSQEGTVDVTMGTAKA >gi|302034494|gb|GL383257.1| GENE 38 41156 - 41827 335 223 aa, chain - ## HITS:1 COG:AGl3408 KEGG:ns NR:ns ## COG: AGl3408 COG3534 # Protein_GI_number: 15891822 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-L-arabinofuranosidase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 110 184 165 239 503 75 45.0 5e-14 MGTSIPGWSAPDCRNSMAADLDEVLYPCTSVRVYVGTLMYNVRNSVDGHPGCFGNIHKAR CHGQDLMISNGGSAMSGERLVRALHLSLYRCYNLWQRCKKLRLGGSLARQQWGLGNEMDG PWQMGHKTPEEYARAVTEVANTFHRFDDNPIVATCGSSGRSMPIFGRRERVVADAAFDSL DLVSATPTTNPIDDDFIRLGVVAVGRTRIVVHRDSDPRTNLSC >gi|302034494|gb|GL383257.1| GENE 39 41960 - 43012 662 350 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 45 348 3 306 306 259 46 9e-68 MTTQALTPNTILGNISLSDPSEIDTTQPFPETVGADVHGNDEPRDVIIVGSGPAGYTAAV YTARAGLKPLVFEGSMDAGGALMQTTEVENYPGFSEGIMGPDLMAQMRAQAERFGAELIA DDVTDIDLTGEIKKLVDTDGNTYKAHVVILAMGSAYRKLGLEDEPRLSGRGVSWCATCDG FFFTGKDIAVVGGGDSAVEEATFLTRFANSVTLVHRRDQLRASQIMADRAAADPKITFAW NSEVVAMQGESKLESITLRDTKTGEERQLEVAGVFEAIGHDPRSELVRGQVDLDDAGYVV CAEPSTRTNVPGVFACGDLVDSHYQQAVTAAGSGCRAALDAERFLTELGR >gi|302034494|gb|GL383257.1| GENE 40 43541 - 44353 552 270 aa, chain - ## HITS:1 COG:Rv3300c KEGG:ns NR:ns ## COG: Rv3300c COG0564 # Protein_GI_number: 15610436 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthases, 23S RNA-specific # Organism: Mycobacterium tuberculosis H37Rv # 31 262 65 285 305 204 51.0 2e-52 MGGQRVDEMLDEGRFVDESGRTFRRDSPFTPQTFVFFHRDLPTETPVPAGIGILYSDERI LVVDKPHFLSSIPRGRHVLESVVVRLRTQLGLPELTVAHRLDRVTAGVLLLTRERKWRRP YQEIFERREVVKKYRLVAPVVHDPAGEGVTATKSGWQVRSRIIKERGILQAREVPGVPNA VTDIALIGEHGGWGLYEASPRTGRTHQIRLHMQRLGAPIVNDPFYPVVLDTPVDDFTHPL QLQAWRMGFTDPVTGDPRAFTSRLRLAAWQ >gi|302034494|gb|GL383257.1| GENE 41 44755 - 46002 949 415 aa, chain + ## HITS:1 COG:CC2315 KEGG:ns NR:ns ## COG: CC2315 COG0477 # Protein_GI_number: 16126554 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Caulobacter vibrioides # 48 415 44 418 418 157 34.0 5e-38 MTITPREGAQPQHRQCASTGRLSAVMFIGQLGWAAVGAACGTLLAALAAEVKPEDKVDLL ALLTTTGAIAAVSCMILAGTLSDRTRSKLGPRNPWIIGGAIVGTLAFACIGLTRNPALLV VAHMVYQGGLNCMLGAFNAIPPDYVPNSVLGKVSAFGGAGYLLAQIIGAVIAGTLVTHPS QGFLMAAWIMLVSSIIVVILLPPHPLRNRSPRPPVTWRQFGAQMRPPSDGQFWWILVGRF LFVISLFMVMQFQLYIATDEMGMTRATAGRLIAMNSAVLAVTAVVLDVITGPWSDKIKRR KPFTMIAPLVAGVGVIPLFLVNEPWTLTIFAAIGGAAFGTYMAVDGALMVEVLPDRDDAA RDLGFLNAANSLPIVFAPGIGATLVKTVGYPGLFTAAIILAILGSLCITRVRRVK >gi|302034494|gb|GL383257.1| GENE 42 46004 - 46933 757 309 aa, chain + ## HITS:1 COG:SSO2521 KEGG:ns NR:ns ## COG: SSO2521 COG0657 # Protein_GI_number: 15899257 # Func_class: I Lipid transport and metabolism # Function: Esterase/lipase # Organism: Sulfolobus solfataricus # 1 309 1 308 311 158 32.0 2e-38 MKLDPRLAEILGRQPKEEQTLAEKRARQNDVAARLRGKITPAVPDSVILEDRTVPGRTHP IPVLIQRPKGLPNPAPVLVWAHGGAFVHGSPRTVLSRTASIAQRAGVCVVSVDYRLLPEH NYPENLHDVVDVVRWVAKTGLDKGFDTSRILVGGDSAGGNLAAATGIMCRDEGNPAILGQ ILEVPILDLSDTSEAMAEARRDAPDLAAALHHSHVRYLSHGASLDNPLTNPACLENAHGL PPTFLLNCEVDPLRDDSIAWQHKLQDAGVPVELTTVRGMAHGTQSFTLAFPQARDAEDKI ITWLRDLIS >gi|302034494|gb|GL383257.1| GENE 43 47057 - 47494 384 145 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5391 NR:ns ## KEGG: HMPREF0675_5391 # Name: not_defined # Def: OsmC-like protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 145 1 145 145 251 100.0 8e-66 MPSATKKVSLVRRSEGHYTATNARGGQIRFGAGKDAEFTPVELLLAAIGGCSSIDVDTVT SRRGEPTQFTVSVSGTKRSDEEGRASLGDVAVDFQLSFPDTEEGREAAGLVNRVVTMSRD KNCTVSRTVEAQTPVAFSIAGEPLD >gi|302034494|gb|GL383257.1| GENE 44 47504 - 47830 407 108 aa, chain - ## HITS:1 COG:Cgl3031 KEGG:ns NR:ns ## COG: Cgl3031 COG0526 # Protein_GI_number: 19554281 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Corynebacterium glutamicum # 1 105 1 105 107 106 46.0 1e-23 MNNVIEVTDATFASEVLGASKPVLVDYWADWCAPCKQLSPIIEELAGTYGDRMVFAKVDT NANTRVAAEQGIMSLPTIQVWQGGQLVKSLQGGKTKKALVKIIEEFVA >gi|302034494|gb|GL383257.1| GENE 45 47829 - 48032 138 67 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|327448789|gb|EGE95443.1| ## NR: gi|327448789|gb|EGE95443.1| hypothetical protein HMPREF9570_00352 [Propionibacterium acnes HL043PA1] # 1 67 1 67 67 103 100.0 4e-21 MTAFLRRPDESKSWRFERHLSFTKAKRTLGVLHEAAITRCEKSRSKDASRTTVPGPHLGR YFSHTRR >gi|302034494|gb|GL383257.1| GENE 46 48071 - 49138 946 355 aa, chain - ## HITS:1 COG:AF0871 KEGG:ns NR:ns ## COG: AF0871 COG0240 # Protein_GI_number: 11498477 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Archaeoglobus fulgidus # 4 318 3 285 335 137 29.0 4e-32 MLRIAVLGAGVMATALTFPAVENGNEVRFIGTHLDDDIIDSIQATRQHPVLELKVDERAK AYHFANAAEAIEGADVIMSGVNSFGVDWVGRQLAKLAKPGQIILCVTKGMQADEDGTLHI LPEVLKKHMGNLADEAHWAAIVGPSNAGELAVHRDTRVVFCGEEQEVRDRLVAAYRTDYY HVWTSTDFVGHEVGACMKNIFAFGGGFAAGMLDKAGQTDAKYVMYDYTAALFGEGARELK QMVAFMGGDPEVATGLGGVGDMFVTTMGGRNVRARTYVGAGVPFSQIRNVKMKGITLEGV AAIGVVGEAIEKLTRRGVIAETDYPWCAPSTTSLLTMLPSICPGRSSSAEKSDVG >gi|302034494|gb|GL383257.1| GENE 47 49338 - 49670 97 110 aa, chain - ## HITS:1 COG:SMb20851 KEGG:ns NR:ns ## COG: SMb20851 COG2390 # Protein_GI_number: 16264892 # Func_class: K Transcription # Function: Transcriptional regulator, contains sigma factor-related N-terminal domain # Organism: Sinorhizobium meliloti # 3 92 204 293 326 63 35.0 6e-11 MSVSRPLEAAQNADLVVYSPGTVSADSILVTAGHVTTNGIDQLRSKGASADIMSHYVDAH GRVVDEELDARTISVDLDGVKVRDDGATVAPGLGAYWSSHPEPKKQRLWG >gi|302034494|gb|GL383257.1| GENE 48 49549 - 50139 137 196 aa, chain - ## HITS:1 COG:SMb20851 KEGG:ns NR:ns ## COG: SMb20851 COG2390 # Protein_GI_number: 16264892 # Func_class: K Transcription # Function: Transcriptional regulator, contains sigma factor-related N-terminal domain # Organism: Sinorhizobium meliloti # 1 135 8 144 326 79 34.0 6e-15 MSNRRRANQDKEMLHVAEMYYFEQMTHAAIAQRLSISRWTVGRILEEARRTGMVKITIDH PLARYHRFETELVDTFGLQSAVVVPVQANDELTMEFVTRMAAQRLSEWRPRPRVVAVSWG RTTAHVAQHLGSGWNPHLASPDRRGISRFRGDAALGRVRFASPGGCPKRGSRGVFARNGE RRLDFGDGWSCDNQRY >gi|302034494|gb|GL383257.1| GENE 49 50149 - 52212 1882 687 aa, chain - ## HITS:1 COG:MT1496 KEGG:ns NR:ns ## COG: MT1496 COG0021 # Protein_GI_number: 15840908 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase # Organism: Mycobacterium tuberculosis CDC1551 # 7 673 44 711 725 780 60.0 0 MATELTWTDTDRLAVDTARVLAADAVEKTGNGHPGTAISLAPLGYLLYHKVMSIDPSDPN WLGRDRFIMSAGHSSLTQYTQLYLAGLGLELSDLESLRTWGSLTPGHPEYGLTKFVETTT GPLGAGVANAVGMAMAARRERGLLDPDAAPGTSLFDHYIYAIAGDGCMQEGIASEASSLA GTQELGNLIMFYDDNRITIEGDTAIAFSENVEARYEAYGWHVQHVDFTNGGTTYEENVEA LMEAIDNAKTVTDKPSFIRLTTVIGWPIPKLAGLAQVHGAKIGAEGVSALKEKLGFEDKP FAIDLEMVQQVRAAFAERGKGLREVWDEKFAAWHDANPDGAALLERMLAHKLPDDLDIPT FEPGKMSTRKASGAVLSALGPQLPELWGGSADLAGSNNTTMKGADSFLPEDRCSEKDPGG PYGRTIHFGVREHAMGGILNGITLAGLTRCYGGTFFVFSDYMRPSVRLAALMKIPSIFVW THDSIGVGEDGPTHQPVEHLASYRAIPGLDIVRPADANETAVAWRTIVEHTDRPAGLVLS RQDLPTIDRSKYASAEGVARGAYVVCEASAEPKVILIGTGSELSVALEAREKLEADGIAT RVVSMPCQEWFDEQDEEYRESVLPSSVTARVSVEAGIAMGWAKYVGCKGASVSLEHFGAS ASGALLFEKFGFTADHVAEVAHTVFME >gi|302034494|gb|GL383257.1| GENE 50 52349 - 54058 1261 569 aa, chain - ## HITS:1 COG:BS_araB KEGG:ns NR:ns ## COG: BS_araB COG1069 # Protein_GI_number: 16079931 # Func_class: C Energy production and conversion # Function: Ribulose kinase # Organism: Bacillus subtilis # 5 547 3 549 560 517 47.0 1e-146 MNNNYVVGLDFGTLSGRAVVVRANDGAEMGAAVHEYPHGVMDRTLSAADGRKLPPDFALQ DPVDYLETLETIVRGAVKDAGVDPDHIVGIGLDVTSATVVAATKDGTPLCQLPEFRNEPH AWVKLWKHHGAQDQADRIVKLAQVRREPWLTRYGGILSSEMLMPKVLETLERAPQVYRAT DVFCNVLDWLTWRLTGVLAFSTGDSGYKRMYQDGKYPSRDYLMNLNPEFADVFAEKMNAP VLPLGARVGGLTPEFSERLGLPVGTTVASGNIDAHVTAAAVQAVENGQMTAIMGTSACYV VPGPQLKEVPGMFGVVDGGIVDGSWGFEAGQTAVGDIFAWFIDNCVPGSYFDEADHRGIG VYDLLTEKCARQEVGAHGLIALDWHNGNRSVLADANLSGMILGQTLTTTPEDQYRALLES TAFGARTIIESFRDSGVEINELVVAGGLTKNTFLMQLFCDICRVPLSVGTIKQPGAHGSA VFAAVAADLYPDVKAASAAMGAKKAGVYQIDEQRAEQYDALYAEYARLHDYFGRGGNQVM HRLKEIRRQAHLRARESTETSNGGNGAHL >gi|302034494|gb|GL383257.1| GENE 51 54131 - 55495 1101 454 aa, chain - ## HITS:1 COG:BH1862 KEGG:ns NR:ns ## COG: BH1862 COG0371 # Protein_GI_number: 15614425 # Func_class: C Energy production and conversion # Function: Glycerol dehydrogenase and related enzymes # Organism: Bacillus halodurans # 14 428 25 394 399 149 28.0 1e-35 MSELIDKALADCGDTDVVVMGRNVLEETGRVFKELFGDAKVIIIADENTWAVAGEQTKAS LEGAGVETVEPMIFPGRPAVYACYANVEKIRDHMRDLDGVIACSIGSGTLNDITKRASDE LGRRYMNVCTAASMDGYAAFGASITENGFKHTMSCRAPQALIADLPTMAGAPQRCTATGL GDLIEKVPAGADWIVADELGIEPIDDEVWDLVQGPLTSAISDPEGLANGKPEAFDGLIEG LVMSGLAMQKYRISSRPASGAGHQFSHLWEMEHLGMDQDPPLTHGFKVGLGTISVLALWE RTLNHDFSTLDVDAAVAKWPSAEEMEAKVRANFTGDMLEPAVRQTMDKYLDADALRERLE LVKSTWPTVRERCRSQVMPAAKVEEIIKTVGGIYHPAQIGLTRERFHDTYYRCQMIRSRY TLLDLLVETGTIGDLVESLFEPDGFWGRRPWPQD >gi|302034494|gb|GL383257.1| GENE 52 55479 - 57083 1150 534 aa, chain - ## HITS:1 COG:SMb20852 KEGG:ns NR:ns ## COG: SMb20852 COG1069 # Protein_GI_number: 16264893 # Func_class: C Energy production and conversion # Function: Ribulose kinase # Organism: Sinorhizobium meliloti # 8 512 4 497 509 248 33.0 2e-65 MLNNGPYLLGIDYGTESCRVAIFDLAGRPLTFAATPYKTTHPRPGWAEQDPEEWWKALQA SCHRAIAAAGISPAAIAGISYDATTLTMVAMDERGNELRPAMMWMDVRATEQAARAENSD SVARLYNGAGVSPATAEWYPFKAAWLREHEPETYRRAAHLVDAPDWVTFKLTGEWTTNIN SAAIRMYYNRDKGGWPEDFYETIGCDDVFDKIPGRVLDLGTPVGTLGTIPAQLLGLRPGI PVAQGLGDAWAGQIGLGVLAPGSMALITGSSHVLTGQSDTEIHGEGFFGAYSDAVMPGQY TVEGSQVSTGSVLKWFKANFAADYTAAAEKIGLNPYDVLNEQSRNIRPGSDGLIINEYFQ GNRTPYTDSKARGIIWGLSLMHTPAHFYHAIQESVCYGTAHNLRAMKAAGFEVDRMVACG GATKSRDWIQMHADVPGVPIVLTEVGDAVVLGTCMVAAVGAGLFKDLPEAATQMVHEIDF IEPDQERHEEYQYYVDKYCDTYPQLCPMIHDMVDHEADKTDDHTDQRRSNVRID >gi|302034494|gb|GL383257.1| GENE 53 57140 - 57997 652 285 aa, chain - ## HITS:1 COG:VNG0719G KEGG:ns NR:ns ## COG: VNG0719G COG0647 # Protein_GI_number: 15789896 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar phosphatases of the HAD superfamily # Organism: Halobacterium sp. NRC-1 # 12 271 29 286 288 169 39.0 6e-42 MHDVIDIPTDFARAYVFDMDGTIYLGEHLLPGARRMIEELRRREIPVRFLSNNPTKDPDQ YVDKLTRLGLPTAIEDISNTVVTTTRWLVNNHPDAKVFAIAEEPLKRSLREAGIELCEDP EKIDIVIASYDRTFDYRKLQIAFDAIWFHKRAFLIQTNPDRFCPFPGGRGEPDCAAVTAA IEACTGQQCKVSLGKPSPVMLTEALSGLDVDPTDCVMVGDRLQTDIQMALDTGMKSACVL TGEATADDVAALDVEHRPTWTLDRIDRLIPASAWRELGWTEDNDD >gi|302034494|gb|GL383257.1| GENE 54 58020 - 59099 1093 359 aa, chain - ## HITS:1 COG:no KEGG:PPA2323 NR:ns ## KEGG: PPA2323 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 359 23 381 381 616 100.0 1e-175 MFTTSVGVFVFGLLATIAGGAVGAAIGGNYAFVLTGFCVLASWGVFAATGNTFGLDYLAF GPFMGPHIAFAGGVAAAIYARYRGHLGDGKDVNTPLAGIGHPDILCVGAAFGIFGYLCQI GISNIPWFGKHTDPVALTVLLSGLLARLIFGGVPGKGLFHGSLHNPELFHENATSFPAKI KPGPNGRWLEWQEKPSQLLTIGSLFGIFAGGASLFLAANVGAYLTTRGLANNLAAANANS FCFGISAVIILFLITNRNMPVQHHVTNIAGLAAVQFFPLLMGKTLTTYHWTYTSSWDSHT WGMATVALVIAAFFGVFTAGLGEFCARLWYNRGTSHIDPPAAAIWLGNTVVVSLATLFS >gi|302034494|gb|GL383257.1| GENE 55 59243 - 59725 476 160 aa, chain - ## HITS:1 COG:YPO3353 KEGG:ns NR:ns ## COG: YPO3353 COG0698 # Protein_GI_number: 16123503 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase RpiB # Organism: Yersinia pestis # 3 149 2 146 151 107 43.0 8e-24 MGLRIVVAADPAAVEYKDVVKADLEADSRVDDVIDVGVQAGDDTLYPHIGIKGAHVIKDG KADRGIFFCGTGMGMAITANKVPGIRACTAHDSFSVERLIMSNDAHVLCLGQRVIGRELA RRLAHEFIGYTFDPSSHSKANIDLIDAYESGAGESAPGNC >gi|302034494|gb|GL383257.1| GENE 56 59942 - 60460 316 172 aa, chain - ## HITS:1 COG:TM0283 KEGG:ns NR:ns ## COG: TM0283 COG0235 # Protein_GI_number: 15643052 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Thermotoga maritima # 1 162 91 252 254 159 46.0 2e-39 MTPDDMVVVDSEGKIIEGDRGPSSDTASHLYVYRRRDDIRSIVHTHSTFATAWAATGQDI PYSLAAVADEFGGPVPCAGYAHIGTEQIGEQVMRFIDQCPAVLLRKHGVFTVGASIEKAL KAAVMVEDVARTLAYATMIGDISSLPQSEIDANHDRYINRYGTATASTGVTS >gi|302034494|gb|GL383257.1| GENE 57 60512 - 61318 477 268 aa, chain - ## HITS:1 COG:BMEII0436 KEGG:ns NR:ns ## COG: BMEII0436 COG1349 # Protein_GI_number: 17988781 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Brucella melitensis # 8 264 11 271 282 176 38.0 4e-44 MSKKEGAPRGGPRARQFAIAEAVVRAGSVSVEDLVESTGVSAMTIYRDLAILESSGVLQR HRGRVVAVANGLHEADAAFRLEQSSSDKQAVAELASDLIAPGSSIMLDDSTSGVWVLRSL PEHTPLTVVTNSLLVAKEVITTSSDKLVVTGGEYQSWAQSLMGPAAVRMIRSMHADLCFL SASGIFEAGCYHPYQEVVEVKRAMLESAETRVLLLDHTKFGRRALFKFADLTEFDHVVVD AHTPRGILSQLSDLGVHLMVVETSASRS >gi|302034494|gb|GL383257.1| GENE 58 61592 - 62659 811 355 aa, chain - ## HITS:1 COG:TM0069 KEGG:ns NR:ns ## COG: TM0069 COG1312 # Protein_GI_number: 15642844 # Func_class: G Carbohydrate transport and metabolism # Function: D-mannonate dehydratase # Organism: Thermotoga maritima # 1 351 3 354 360 413 53.0 1e-115 MTFRWYGAETDPITLENIRQIPGVSGIMGAMDWIPVGEMWSDEEISSYVRKVNDAGLECE VIESVNVHEDIKLGKPSRDIYIANYCKTLENLAAHGIKVVVYNFMPVFDWLRTELFHRNE DGSTCLYYDHEELVGLTPQDIVKATLDSSAFPLPGWEPERLADLDEVMAQYTDMPRDQLR NNYRYFLEGIVPTCEKVGIRMAVHPDDPAWGIFGIPRIVHSDSDLQRIVDLVNSPANSLC VCAGSLGSNPDNDVPAILAKYGDMGRVAAAHVRNVKFLGSKKFKEASHLSSDGSLDMYAI MKSIHDHCSNSYIRPDHGRMIWGETGRPGYPLYDRALGITYLNGLWEAIEKASAY >gi|302034494|gb|GL383257.1| GENE 59 62668 - 64257 974 529 aa, chain - ## HITS:1 COG:TM0068 KEGG:ns NR:ns ## COG: TM0068 COG0246 # Protein_GI_number: 15642843 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol-1-phosphate/altronate dehydrogenases # Organism: Thermotoga maritima # 17 526 18 532 539 437 46.0 1e-122 MKLDLDALHGPALADAGLALPLFDVGEMRSQAHDRPRWMHIGPGNLFRVHIARLAQDIMN SGAEQCGIAAIAPRNPQRLDRGLTDHDLLTLGVTSHADGHTDFGVIASISEGLAYRRDDD FRRITEIACAESLQLITLTITEKGYQLNGYDGSYQDAVVEDLGRDPESDRMSTAMGLVTA LLVRRFHAGATPVAVVSCDNFSHNGDMLRTSVLTIAAEWEKRGVIDHRVVEWIAEKVEFP ISVIDKITPAPSQKVAEQLAAMGLEDMGIDPDVEVAGFVNTEPAEYLVIEDRFPNGRPEL EKAGVYFTDRDTCYRFERMKVTTCLNPLHTALAITGVLLRKPTIDEAMKDPGLAGLVHCL GWQEGLPVVSDPGIIDPKEFLREVEEERFPNPFLGDTPSRIATDTSQKIPIRFGETVKSY LADDSLKVASLRAIPFVFAAWCRYLMGIADDGEPVELSSDPLLGQLESVVSGVRFGDDDS KVISPILSRGDIFGVDLTMTPLSDVVERFFIRLTAGPGAVRSVLDEEFA >gi|302034494|gb|GL383257.1| GENE 60 64273 - 65685 811 470 aa, chain - ## HITS:1 COG:SMb21354 KEGG:ns NR:ns ## COG: SMb21354 COG1904 # Protein_GI_number: 16264678 # Func_class: G Carbohydrate transport and metabolism # Function: Glucuronate isomerase # Organism: Sinorhizobium meliloti # 8 459 5 458 469 370 44.0 1e-102 MSTPTLTLSEDRLLPRESSALAAAREIYRSTKGLPIISPHGHVPVSWIADDMAFSDPTSL LITPDHYVNRLLHANGVDLEDLGVGRKTMSEEDNRRAFRILCEHWRDFAGTAMRYWLVDQ LVGIFGITERPSPENADRIYDTIAERIAQPDFLPRALMDSFDIAFIATTDDPCDDLDGHA RLAADETFTRRVAPTFRPDKYLEPAAGGWTGLLARLSEVSGCDATTLDGFTEAMEDRRAY FRQHGAVSSDHSHRDLGTIILDHDRAASIFDASVAGRATVEEMALLRRHLFTDQARMASE DGLTMTVHPAVHRNHDTAAFHRFGADIGSDVPVTLEVVDSLHPLLDKFGNTDLKLVVFTI DETLYSREIAPLSGWYRSLYIGAPWWFIDAPESVMRFKHAVTEMAGFSRVSGMIDDTRAF CSIPARHDMSRRLDAAHLAELVVLGRLDLDEAVEIAHRLVVEQPTQVFGL >gi|302034494|gb|GL383257.1| GENE 61 65750 - 66757 643 335 aa, chain - ## HITS:1 COG:TM1200 KEGG:ns NR:ns ## COG: TM1200 COG1609 # Protein_GI_number: 15643956 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Thermotoga maritima # 11 335 6 333 333 145 30.0 2e-34 MGVGEESTAPVTISDVARAAGVAPSTVSRAFSRPGRVSVKTSERIFQAARKLGYRQDEVP RVSTSRTYHLVAVCVADVMNPVFGATVKGIFAGARKRGYMVVLIDSNESSEIESETTKRS LATVDGFIFVGSRMSDAGLRHLAGIKPVMTVNRKVPGVSSVTPASDEGLGDALTHLVSEG RSTVTYLAGPTASWQSGVRWRSLLERARRDGKVTVHQLACPTPTIRGGIEAFDMWRAHPT SAVIAYNDLIAIGFMRRAMACGLRIPNDVAVIGFDDIPFSALVSPALSTVRVNQFQMGVV AVNRLLDMVEKPSHHERQAPSEDVVPVSFMVRESG >gi|302034494|gb|GL383257.1| GENE 62 66934 - 68358 1290 474 aa, chain + ## HITS:1 COG:BS_yjmB KEGG:ns NR:ns ## COG: BS_yjmB COG2211 # Protein_GI_number: 16078296 # Func_class: G Carbohydrate transport and metabolism # Function: Na+/melibiose symporter and related transporters # Organism: Bacillus subtilis # 17 448 16 439 459 189 31.0 1e-47 MSTITTKGQKAKAVNARDFDIRDMIGYALGDVGNNFTFNLVNSFLMIFYTNVFGLAAALV GALFMAARLVDAFVDIMVGRLIDNSKMTKRGRFTPWVMRMKFPLAASAILLFLPAAGHLP MTTRVVYAFVTYLAWGIFYSFVNIPYGSMASAISGKPRDKTSLSTARSIGSASGAAIVSY VVPLIMYGSNSHQINPHRFFTGAAIFAVLGLFCYIGLTMLTVERIRIDKTERVPLGKMFS EMAHNKALVMLVLIDIVVVINQNLSGITLTYLFNDYFQNKTAMSIALVFNFTTVILVAPF AQTLVRNFGRKESAAVALFFGAAMYGLMLIIHTHSPWIFLVDLFFGSLGAGVFNLMVWAF ITDVIDAQEVMSGEREDGVIYGVNSFARKLAQAIAGGIGGAMLTMIGYQSSSQGGAVQSE SVVNHLYTLATAIPTICCLGAALLMLGYPLTRDKVVANADELARRHAVQAEQNS >gi|302034494|gb|GL383257.1| GENE 63 68378 - 70870 1567 830 aa, chain + ## HITS:1 COG:YPO0848 KEGG:ns NR:ns ## COG: YPO0848 COG1501 # Protein_GI_number: 16121156 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-glucosidases, family 31 of glycosyl hydrolases # Organism: Yersinia pestis # 129 823 86 778 792 741 51.0 0 MDTLMRITDHLTTSPGIQLKIDKRWGASVTFVTRSIAHVRIFDAADPQLDRTWSISLGSN ATPRTGLGPRDLLDHSPAPAWAGNSRDVAPVEDMEVTTTVTASAEDTASHPEFSGVYADE PVDSPDPDEKSFIVGTDSLRVIIRDCPLRMTWQRRADDWVTVSEDRPTGAYEIGTHTGRV AHHRVRNIDDRYYGLGEKSGDLERTGRIFDMRCLDALGYDAGSTDPLYKHVPFLMTRTAN GAFGIFYDNLSASRFNLGAEVDNYHRPFTSWQADHGDIDYWVMTADHLCDLTPQILRLTG NPAFLPRWALGYSGSTMHYTDAPDASCQLLKFIDLLREHAIPCDSFQLSSGYTTIGSRRY VFTWDRDKFSQPTDTTRHFRDAGLHLAANIKPALLTTHPYYRDVAEAGIFVTNSRTGEPA TSMFWGGHGGNVDFTNPRGVQWWKDNVRHQLIDMGIESTWNDNNEYELWSEDAICDGFGH PVELDRIRPVQALLMSRASFEAQREAAPVERPFLISRSGPLGLQRYVQTWSGDNSTSWRT LKYNTRMGVGMSMSGLVNFGHDVGGFAGTARPGPELFARWVANGVMHPRFTIHSWHNDGS VNEPWMYPEITDIVREMIRLRYRLIPFLYTLSYLAAERREPIVNPVFSLDDTLHEESDDF LLGHDLLVASVVEKGQTTRTVTLPHVSDGWFEFDTGVHHDPGTVTLEAPLDRLPLLVRAG AGIPQCELPAPSGEIITTRTVENSPHRIVLYLPDGNGHSQGFFFDDDGHTNGYRQGHGYW LTWSADHTDTTVIVHTHVEGDYQPSWGTMAFALRPGDDRAIKVVADAAQD >gi|302034494|gb|GL383257.1| GENE 64 70903 - 72351 768 482 aa, chain + ## HITS:1 COG:uidA KEGG:ns NR:ns ## COG: uidA COG3250 # Protein_GI_number: 16129575 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase/beta-glucuronidase # Organism: Escherichia coli K12 # 1 435 1 433 603 408 46.0 1e-113 MLRPQDTATRDTKCLSGMWDFAFDAEDRGQTEKWFTRPLPTCTEMAVPASYQDLSTDPAA RDHVGPVWYQREVRIPRGWTDDRVVVHFESATHAATVWVNDVEVVRHVGGYLPFEADITD HVCAGKKCRLTVRVDNRLSFQTIPPGIIVDSPEGPKQKYWHDFFNYAGIHRDVWLCRRPQ AHIEDVTITTDIDGNDGIVTWSVLLHDAEPLTTRVTIFDTEGNVVAGGTSANAHARIPSV HLWQPGHGYLYEAEISLVDGDQVIDTYQQVFGVRTIRVDGARLLVNGEPVHLTGFGMHED HQTIGKAHNDALMLRDAACLEWIGANSLRTSHYPYSERILDYADRHGLLVIDETPAVGIN MGLGGGIFGAQGYPTFSAETINDKTQKVHAQVIRDLIARDKNHPSVIIWSIANEPESETE AAENYFLPPLRRGTRSRPHPSGEFRQRHARSVRKVSRIAVLRRFAAQPLLWLVRRHWRPG RR >gi|302034494|gb|GL383257.1| GENE 65 72140 - 72685 328 181 aa, chain + ## HITS:1 COG:ECs2324 KEGG:ns NR:ns ## COG: ECs2324 COG3250 # Protein_GI_number: 15831578 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase/beta-glucuronidase # Organism: Escherichia coli O157:H7 # 15 179 193 358 370 198 56.0 6e-51 MSQSLRLKPPKTTSSPLFDVARAADPTRPVSFVNVMLAPFGKCRVSQYSDVLLLNRYYGW YVDTGDLAAAERHWREEMAGWASENKPIIITEYGADTMPGLHQIPAQPWSEEYQVEVLKM NERVFDSFDAIVGEHIWNFADFATTSGTMRVGGNRKGIFTRDRQPKSAAFHLRKRWRGVA Q >gi|302034494|gb|GL383257.1| GENE 66 72789 - 76190 2759 1133 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5414 NR:ns ## KEGG: HMPREF0675_5414 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 1133 1 1133 1133 2319 100.0 0 MAGTIGSMVTQAHMDSVNLRLALNGLPLPTAARASYIDVVAPVLARQRELRRELPELLCP ADRRIQAFIDRYLGEDSSVHPRLPDTTLTLDEPGLARALSLPVDGDDFSSDLVSSYRVAN GVLHNPRNDRRTTAGVFHVAEGGLAIPDDKKAVPIDVFARLLDLAFQAPPEHTLLPYTST QPVDRQAHTWVSLLLRPLVVPEVPGFVSERRMEIRFFAPGGLVSNLDFVEGIFGNSGDPL LPVNDSALAPSGWTGHSGCIILAPHLNLIRKVDLGLPHVDQATDRQRRDGMCWSDESELY NEGKPFKLCARDESGVILTIVADNYFGYCKKEVKTQISYSANLFGLAEEEHSGGARAYIS HNEGQEYATPVCDQTVSDVVMANPDHFEMLSDGQARVLDIDDVVLVPGGTKFSLRDGTVS WDNGDHSIRMRADTEYISPAGYRIHMVHNDADDQWYLEGTYGDSTTLHKCCTVSGGGKSE ISKAISDTFLWGNAYSPDFEADMDAVDDILHRDYSTRFADPKLNGIDHRPVLSTERSVGS VIKLLTPSSDFTDWYNDWINSIPAFRKELVFTIKRYYKPEWGDDWRSHFSVAPTNGRHGN MVRLDGQKVLVSMARVGFQPDGSWRLFTLRHDYAPAVKVQTEDDMTASIVTSPGVVTGPE GLSRKVVANCEALLFQRPDDAIYRGYDTQTERDMSGTDLFISNYQPLTREDVRAMRDDVV AFSKFTPPMRTFLSNFADSDPSEQPKFVVSSADPRLIDGVRSRNPRYLQVRPDIAKPRET AIANLASHLYHGLPIDEPLPLPVDVVAAGRRNNPPEGKIPALCAYNPLHYMELPELFMEF ISSMTGKSPSTTGAGSEGALTKAPFNALPAVFDLNSSFLSFVLSGYDGWLSSAGFIGPKV EVAHDISLLVPEIFCRMSPAERDAKTLIEGGYLEKLEDYDKDGELILASRLGYRMTEKFM RAYFGRIFLHPDTVFTPEMLRPELQDADIFADSVRTISTTHARVAKAYFDDGTVSLAVPP IRALLEIMVNGVCSEGWTLDDPELREMFTRESVLASDWYAERIDAKQAEAVRRAERGIAH LEQFMADPRNASACEEIDVQARLDQVRKFHDRAVTAEYRQQLVGTLGRQVNFR >gi|302034494|gb|GL383257.1| GENE 67 76403 - 76648 90 81 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MARLSLMALGQESLVGMVDTADEGFGSDELNRRKPGTSGEIARPVIFDTDPLVETGCSEI NDVHTPIVLPLMLLRESSDKG >gi|302034494|gb|GL383257.1| GENE 68 76684 - 76971 88 95 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTEVLTAEARLSQATILLNPAAMKARVISSTAEPVIFAGPGCQATDTGTGARGTSRNQRS ASLGKSTSLPRVRAATTGTTNLATIPSWVADSATR >gi|302034494|gb|GL383257.1| GENE 69 77104 - 77343 214 79 aa, chain - ## HITS:1 COG:no KEGG:PPA2336 NR:ns ## KEGG: PPA2336 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 79 150 228 228 145 98.0 4e-34 MSAGAIRRMRLDLRRSVKTEESWIERWFGWLRGNGLVPADVGRLRWPMSLARHDYDAPAT VVQTSAQSPQQAMREPLTW >gi|302034494|gb|GL383257.1| GENE 70 77985 - 79331 980 448 aa, chain + ## HITS:1 COG:PH0207 KEGG:ns NR:ns ## COG: PH0207 COG1167 # Protein_GI_number: 14590140 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Pyrococcus horikoshii # 3 424 5 427 428 328 36.0 1e-89 MRVKAAVAAHEAADAATDRRVDTTFDKFHDRYSTRSLGLKTSPVRALFAVANRPEVVSLA GGMPNIADLPLDVVSESLKELVDTRGTVVMQYGSGQGEPEMRKHICEVMAVEGLVADPDD VTVTCGSQQGLDLVTRIFCNPSDVIMAESPAYVGALNTFASYQTEVIHVDMDDSGLVPES LREKVTAARQDGKSVKFLYTVPNYSNPSGISQSTERRREILAVADELDLLVVEDNPYGLL NLDGDPLPTLKSMDPDNVVYLGSFSKTFAPGFRIGWVLSPSFVRDKLVLAQESATLCPPV FSQFAVSSYLAHWDWRAQVDSFINMYRIRRDTMLASLAETMPEGTTWSHPSGGFFVWLTM PGAIDSAAMLPRAVTKFVAYTPGTAFYADGRGQRNIRLSFCYPTPERIKVGVERLAGVMR EELEIAETFGLADERRHSRDLGPGPNLA >gi|302034494|gb|GL383257.1| GENE 71 79626 - 80609 460 327 aa, chain + ## HITS:1 COG:aq_521 KEGG:ns NR:ns ## COG: aq_521 COG1181 # Protein_GI_number: 15605989 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanine-D-alanine ligase and related ATP-grasp enzymes # Organism: Aquifex aeolicus # 17 319 3 290 291 174 35.0 1e-43 MPSLSWHWLNGGMLQPVVVLAGGLSHQRDISLKSGRTVAQALRRVGHEVVEADIDSALIE TLRANDGAVVFPMLHGGLGENGALLEVLQLMGIPYVGSSPATCRISFDKSIASRAVAAAG IVTPQQVALPHDVFRELGAQTVMRSIAEKFGLPVIVKPARGGSSLGVTKVDGVDDLPQAV ANAYAYDDMVVVEEFIVGTELAIGMITTSEGTRVLPAVEIRPVGGVYDYSAMYTGGETRL TAPADISDTAAQTATAMARVVQKELDFSGISRVDAIVDESGRPVFLEAGAAPGMTATSLV PVAMKAAGLDLGEVCSRLVDDVARNHG >gi|302034494|gb|GL383257.1| GENE 72 80602 - 81318 337 238 aa, chain + ## HITS:1 COG:no KEGG:PPA2339 NR:ns ## KEGG: PPA2339 # Name: not_defined # Def: membrane-associated protein # Organism: P.acnes # Pathway: not_defined # 1 238 7 244 244 430 99.0 1e-119 MADSVHMKGSRHAVRVKQASVVLLGVVLASVMVFLGLWQMNVFESQRDDSTQARINGPVI TWNEAPKKADVMAQYGRRVTVTGTFQRSTTTLIGTSWPVRVVTGIKLTSGETMAIVRGKL SKGERVPAAPTGVITVTGVLAASEADDGRRNSQMPAAVLPSLRLEVLTQTWPQPLVPATL TLDKKNALAQGLAPAQPVLPKGDGGERNRGYALQWWVFAIFTVAMSLAFARAAGKHKE >gi|302034494|gb|GL383257.1| GENE 73 81330 - 81887 390 185 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5419 NR:ns ## KEGG: HMPREF0675_5419 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 185 1 185 185 361 100.0 1e-98 MQRQLTCFSTLFHVKHSDDVTSDDFYMTPDNISDDTRAGDAAHDHSTDSRHSETTAETET EPWIEPDDISGVRKALLCYRVMAYIVGTLLIVLVCVAMPLKYAAGRPTMVNVVGISHGWL YPVLLITAYLLGRKAGWPLTRLLIIALAGTIPFLSFVAEYFARKDVNCRIDDAKDYWAHH GAPTE >gi|302034494|gb|GL383257.1| GENE 74 82145 - 83065 456 306 aa, chain - ## HITS:1 COG:ML2706 KEGG:ns NR:ns ## COG: ML2706 COG1475 # Protein_GI_number: 15828464 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Mycobacterium leprae # 4 305 9 331 335 236 44.0 4e-62 MAAKHSGLGRGFGELFQRTDLDDDDEERVDDASTDGDAINERVGGSRLELISVDEISPNA RQPRKMFNEEELTELSESIRAVGVLQPVVVTPADNGYELVMGERRWRAARKAGLATVPAI VRTTASEDMLRDALLENLHRVQLNPLEEAAAYEQMLNDFGCTQDELSEKIQRSRSQIANT IRLLKLSADVQKRLLDGEITAGHARCLLAIDNPEVQVGTANRVVDEGLSVRATEELVRQT LDDTTEVKPHQRKKPGRDTEAVKLGEQLSQRFRTAVKVRRRNGRGTITFPFNDNEELERL IDIFSD >gi|302034494|gb|GL383257.1| GENE 75 83068 - 84054 224 328 aa, chain - ## HITS:1 COG:Cgl3035 KEGG:ns NR:ns ## COG: Cgl3035 COG1192 # Protein_GI_number: 19554285 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Corynebacterium glutamicum # 43 304 27 289 307 288 54.0 1e-77 MTNEVPIYDGAPKRAAFDSPDVLEVAESSADSIDGPAAPTVPLTLPRPASPRTVVVANQK GGVGKTTTAINFAVALAMSGLKVLVIDTDPQGNASTALGIDHEAGTPGTYEVLLDEEDIG LVAKPSPEAPGLEVVPATIDLSGAELQLVDVKGRERRLRKALRKYLKNHDVDYVILDCPP SLGLLTLNALVAADEVLLPIQCEYYALEGVTQLMRTIEAVRNAMNKELRLGSILMTMFDG RTRLSTQVDEEVRTHFARETMSTRIPRSVRVSEAPSYSRSVLTYEPTSAGAVAYREAAAE FAKRHACDEHSTNTSGVKHPDASDTKKG >gi|302034494|gb|GL383257.1| GENE 76 85259 - 85624 71 121 aa, chain + ## HITS:1 COG:no KEGG:PPA2371 NR:ns ## KEGG: PPA2371 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 121 1 121 121 192 98.0 4e-48 MSCCSFAQASTDDASVACHPAQFLDIVKLLSRSAELARRTTLFHVKHHILLRAVCHPSAM PSTSVRTHMIGTDARPSSPKLTHTAGVATITCRHPCWCPARVLMVAAPLAGTSTHKQRLQ H >gi|302034494|gb|GL383257.1| GENE 77 85881 - 86507 426 208 aa, chain - ## HITS:1 COG:ML2708 KEGG:ns NR:ns ## COG: ML2708 COG0357 # Protein_GI_number: 15828466 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division # Organism: Mycobacterium leprae # 22 178 44 203 248 147 50.0 2e-35 MTLVSDDAIADRLYRDNYKTIRQYVDILVSRGVDWGLIGPREIGRLWERHILNSIALESL IPEGCRVADVGSGAGLPGIPLAILRPDLEMTLIEPMLRRSNFLTEALDELGLDDRVTVVR GRAEDADLHVDVVVSRAVAKLATLINWTADLIVESGSLLALKGQSADDEVVKAKKELSKR RLSAEVLLIRADPAADVTRAVRVRRAGK >gi|302034494|gb|GL383257.1| GENE 78 86804 - 87016 105 70 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313771078|gb|EFS37044.1| ## NR: gi|313771078|gb|EFS37044.1| hypothetical protein HMPREF9574_02595 [Propionibacterium acnes HL074PA1] hypothetical protein HMPREF9585_00244 [Propionibacterium acnes HL083PA1] hypothetical protein HMPREF9593_02006 [Propionibacterium acnes HL046PA2] hypothetical protein HMPREF9597_00501 [Propionibacterium acnes HL005PA4] hypothetical protein HMPREF9595_01573 [Propionibacterium acnes HL005PA2] hypothetical protein HMPREF9583_00868 [Propionibacterium acnes HL038PA1] hypothetical protein HMPREF9337_00168 [Propionibacterium acnes HL096PA3] hypothetical protein HMPREF9584_00625 [Propionibacterium acnes HL092PA1] # 1 70 1 70 70 110 100.0 4e-23 MLTFPRPTNAGIALPTHQSIHNNQNAERSFPELSTVITTASIWKFKSAEHQPHESSAEHR RPSNMSVILR >gi|302034494|gb|GL383257.1| GENE 79 86953 - 87153 113 66 aa, chain - ## HITS:1 COG:no KEGG:PPA2345 NR:ns ## KEGG: PPA2345 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 66 1 66 66 130 100.0 2e-29 MASQGWRGYREIANQVTPGATPDQTSTDHANGLLSFVVDSDVLLHAYLKMTDMLDGRRCS ALDSCG >gi|302034494|gb|GL383257.1| GENE 80 87240 - 87545 79 101 aa, chain + ## HITS:1 COG:no KEGG:PPA2373 NR:ns ## KEGG: PPA2373 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 101 28 128 128 181 99.0 1e-44 MTLDKRGQTQSIDLGIIASSRKYRPPSRYHRYSTSCTHGNFSNVVLRRDSIDLATWLRTG FASSRSQQRCPSNMSEEDSTSSLAQLDHDDILRIALGDYLH >gi|302034494|gb|GL383257.1| GENE 81 87826 - 88263 60 145 aa, chain + ## HITS:1 COG:no KEGG:PPA2372 NR:ns ## KEGG: PPA2372 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 145 3 147 147 249 99.0 2e-65 MILNGTPSYALTSHTSFDVTGIQQLPRHEQSLSRRRYHVRYHVAALTQRASSTISNVNST CVHTGFRQLYPPPPAQKFTATDIPSLRNNLITDPSHHVPTCFRPCQTELSHDPVSPNFTF HVKHIFIDFSFCRHIVQYLYPPVQP >gi|302034494|gb|GL383257.1| GENE 82 88493 - 89521 661 342 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5425 NR:ns ## KEGG: HMPREF0675_5425 # Name: not_defined # Def: alanine racemase, N-terminal domain protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 342 1 342 342 677 99.0 0 MLKLTIDAQRWRNHLTAFAKSCPGIVPVTKGNGYGFGHELLVQESQRLGIDILAVGVAQE VASVRQYGWDKDVIVLNPWRPGDEVAAGLLNDPKVITTISRREDIAALRDLAPSASILVE VETSMHRHGVPADEVAALDLDGFDLRGWTIHLPSGASLDEGREMARIVKQHPLASRGIWF SHLSCDDYIALSKKLDVPVRMRVGTRLWLGDANAYRVTGTVLDVRWLPKRTPVGYHRVKT HADGYIVVVSGGTAHGVALSALISARSLRQWLIPGAEALQQMVGRVISPFTIAGKKAVFA EPPHMHSSLVFVGGPGEPTHVGDEVPVNVRMTTATFDEISLV >gi|302034494|gb|GL383257.1| GENE 83 89523 - 90614 921 363 aa, chain - ## HITS:1 COG:SA2057 KEGG:ns NR:ns ## COG: SA2057 COG2348 # Protein_GI_number: 15927842 # Func_class: V Defense mechanisms # Function: Uncharacterized protein involved in methicillin resistance # Organism: Staphylococcus aureus N315 # 4 254 14 232 421 88 26.0 2e-17 MLEFIAARGSASFLQTPAWARVKSEWRGERVGFYDGDELTGVGLILYRKLPKLPRYLAYL PEGPVLDWSRDDIAEHFDALVTHVKKRQAFAVRIGPAVVHRIWGTKTIKTAIADDNITSL TEVEPDIVTPEGEHVVSVLKQGGWITDETGHGFAAGQPQFNFQLSLRHEDGTQKSEDELL KGMNQLWRRNIKKAAKFGVEVKLGTRDDLARFHKVYLETAERDGFTGRPLEYFEHMWDVL NAEEEGRMKVFLAEHEGDVVAATTFVTVGEHAWYSYGASTTAKREVRGSNAIQWAMIRTA NEARCAVYDMRGIVAGVGANDPEIGLIQFKVGSGGQAVAIPGEWDKPINPILYKAFDLYM KRR >gi|302034494|gb|GL383257.1| GENE 84 90927 - 91538 605 203 aa, chain - ## HITS:1 COG:MT4039 KEGG:ns NR:ns ## COG: MT4039 COG1847 # Protein_GI_number: 15843554 # Func_class: R General function prediction only # Function: Predicted RNA-binding protein # Organism: Mycobacterium tuberculosis CDC1551 # 38 202 22 187 187 113 57.0 3e-25 MSESSERSEELDVDQVEDCCNLDPEEIEADDVESEDSDDNDSDGAENDDEETGDPLDEEG DIAADYLEELLDIADLDGDIDTYVESGRAHVSIVTDSQTLVGKDGKVLEALQELSRLAVM TEVGHRSRLMLDIAGYRESRRKDLVVLATEAIQSVKETGEPAHLAPMNPFERKIVHDAVA AAGLVSESEGVEPKRHVVITQEQ >gi|302034494|gb|GL383257.1| GENE 85 91591 - 92670 993 359 aa, chain - ## HITS:1 COG:HI1001 KEGG:ns NR:ns ## COG: HI1001 COG0706 # Protein_GI_number: 16272937 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YidC # Organism: Haemophilus influenzae # 21 267 332 529 541 144 36.0 2e-34 MLNPLVILSLGGALHTMGHAIMVPLYWAVSGLLVLFHYLWSPLFGRDSGISWTLAIVCLT IFIRLLLVPLFVKQINSARSMQLIQPKMKAIQEKYGDDRERAGQEMMNLYREEGVNPAAS CLPVLLQMPIFLALFRVLDGASRGIPRGHFFAKNPGLMESLQHAKFFGAELAGRFLPMNN GFGGTQVVALVLIIIMVATLFYTQLQLMRKNMPPESLTGPMAQQQKMMIYLFPLMYLFSG VSFPIGVMLYWCTSNLWTLGQQEILIRNNPTPNTPAYIDWRERMIAKGKDPDEIERARRE KRRRKVVAPTPVATIEDSEKPMVARQGVTRQTVRKDASGGRQVVRRQQPAKQTRAQRKK >gi|302034494|gb|GL383257.1| GENE 86 92670 - 93146 218 158 aa, chain - ## HITS:1 COG:VC0005 KEGG:ns NR:ns ## COG: VC0005 COG0759 # Protein_GI_number: 15640037 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Vibrio cholerae # 26 105 7 84 85 75 45.0 3e-14 MIAAAIPSRHPNDDGGVWATVRRFRPLTWLAIGFVKGWRALISPLYGDVCKYQPSCSTYG LRALQVHGVFRATPMIIWRILRCNPWSHGGYDPVPGTPEARQWRELHPETARSKNEPIHD LTDDNPRDHEPALRKSIPGYTDPGSTHTGTPSHTRGEN >gi|302034494|gb|GL383257.1| GENE 87 93143 - 93589 165 148 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5431 NR:ns ## KEGG: HMPREF0675_5431 # Name: rnpA # Def: ribonuclease P protein component (EC:3.1.26.5) # Organism: P.acnes_SK137 # Pathway: not_defined # 1 148 1 148 148 258 100.0 4e-68 MLPARSRMHRPGDYRAAVRGGVRSGRPTLVVHAGRHAQFRFDSADKTELSTAPVGNCGSG EPLVSTTTSRSDLDVTPRVGFVVSKTVGNAVTRNRVKRRLRHLCRPLVDELEDGTVVVVR ALPAAATQPDRVAKDLDGAWHQALRKLR >gi|302034494|gb|GL383257.1| GENE 88 93596 - 93730 215 44 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|50843793|ref|YP_057020.1| 50S ribosomal protein L34 [Propionibacterium acnes KPA171202] # 1 44 1 44 44 87 97 6e-16 MKRTFQPSNRRRARNHGFRSRMSTRAGRSILAARRRKGRVNLSA >gi|302034494|gb|GL383257.1| GENE 89 94090 - 95613 1652 507 aa, chain + ## HITS:1 COG:ML0001 KEGG:ns NR:ns ## COG: ML0001 COG0593 # Protein_GI_number: 15826866 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication initiation # Organism: Mycobacterium leprae # 41 506 44 517 521 434 51.0 1e-121 MSDTPFGDADHPRPAADHPRPAPIHPDAVLPPPMSSQSADNDPTEALNEAWTNILTKVSK PNRAWLSNTTPVTMHSSTAMVAVPNEFARDRLESKMRYELEELLSDHFHKAIHLAITIDP DLELALGAPDHEDEEEEVPPAQFVPKVTVGVTKPSARPTTTIDDDEGNRLNPKYTFDSFV IGASNRFAHAAAVAVAEAPGKSYNPLLIYGGSGLGKTHLLHAIGRYVMSYYDNVKVKYVS TEELTNDFINAIGTNRTTEFRRSYRDVDVLLVDDIQFLQSKIQTQEEFFHTFNTLHNAQK QIVMTSDRPPKLLEALEPRLRSRFEWGLLTDIQPPDLETRIAILRRKVAAEKITVEPDVL EFIASRIQTNIRELEGALIRVTAFASLNQQPVDISLAEVVLKDLIPEGRETPVTPERIIA ETADYFDISADDLLGTSRAQTLVTARQIAMYLCRELTDLSLPKIGAEFGGKDHTTVMHAD RKIRALMGEQRQIFNQVSEITNRIKQY >gi|302034494|gb|GL383257.1| GENE 90 95658 - 95897 104 79 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRDGDVCLFFVLVTPVELVDNCQTPLSATFCGSGRRRGLDVRAGGVAVDIGSCPTVIPWL STGFPHMGVGIGVTGRACA >gi|302034494|gb|GL383257.1| GENE 91 96001 - 97245 1097 414 aa, chain + ## HITS:1 COG:MT0002 KEGG:ns NR:ns ## COG: MT0002 COG0592 # Protein_GI_number: 15839374 # Func_class: L Replication, recombination and repair # Function: DNA polymerase sliding clamp subunit (PCNA homolog) # Organism: Mycobacterium tuberculosis CDC1551 # 32 413 16 401 402 286 43.0 6e-77 MGVPTVGKHGYDQHAGTMECETPNQGDAVEIRLERDVMAEAVAWAARSLPNRPTVPILAG LLVRAEGDSVVMSASDNETSAQITLSAQVDEPGESLVSGKLLADIARSLPNKPVQITTDP AKMDLVCGSARFTLQALPVDEYPDLPQMPAATGTVDASVFSRAVAQVVVAAGRDELLPVF TGVRVEINGETLSLLATDRYRMALKEITWNPSATDAEATALVPAKVINETARSMTSGEHV TMNLSSGDSGEGLVGFEGDGANGVRRMTTRLLSGEFPKVRHLMDIKATRSVRARTDELIN SVRRVSLVAERNTPLRMVINDDSVALSAATGDQAQASEAIEAVVTNHVDGEPTITAAGFN PHYLSDALGALDTPYVHFSFTAPGKPCLVTGLNDFDGKPETDYRHVIMLMRLPS >gi|302034494|gb|GL383257.1| GENE 92 97382 - 98035 228 217 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3002 NR:ns ## KEGG: HMPREF0675_3002 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 217 1 217 217 422 100.0 1e-117 MTTIADVRTGVNRVFDALGAPSWSNPHADHSVAAEEEYSRVTDPERYHVLMLRLQAWQTV LAKLCDVDVDTMAKGRGRLQQRWSSPHSDTLPLYVSVVTFDQVPFVGLSATSDADPFDII PDCACDACDHGSEDLLRVLDADLAAVVDGSLVVVTGPVVNGEPTFHLVGTGQGCASTWGG DEVGPLAEPEAVIDAIRSGDDPLLPPGCTVLHGRPWL >gi|302034494|gb|GL383257.1| GENE 93 98093 - 99277 565 394 aa, chain + ## HITS:1 COG:Cgl0003 KEGG:ns NR:ns ## COG: Cgl0003 COG1195 # Protein_GI_number: 19551253 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair ATPase (RecF pathway) # Organism: Corynebacterium glutamicum # 1 374 1 368 394 315 46.0 1e-85 MFVERLELVDFRSYVRADVPMAAGATTFIGSNGQGKTNLVEAVEYLSTLSSHRVSNDTPL VRLGADQAVVRGRVRAGTDDARSLLLEVEINARRANRARINRAPLTRPRDILGVLRTVVF SPNDLAVVRGDPSDRRAFLDGLVVTRWPRMAAVKSDYARVLKQRNALLKSLSGKGRSAGA EIGATMDIWDNELATIGAELLSARLDTLSAVMPLTSAAYREIAPVNDLTTASYKSTIDLE GLWSPPQERESSTPIDRKELANRFLDTLAKRRADELIRGVTLVGPQRDDIILHIGEMPAK GYASHGESWSLALALRLGSFQLLRDDGIEPVLVLDDVFAELDATRRDRLASSVVQADQVL VTAAVASDVPEILRGERFDVGGGQVLAYEGNNDD >gi|302034494|gb|GL383257.1| GENE 94 99270 - 99863 214 197 aa, chain + ## HITS:1 COG:ML0004 KEGG:ns NR:ns ## COG: ML0004 COG5512 # Protein_GI_number: 15826869 # Func_class: R General function prediction only # Function: Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives # Organism: Mycobacterium leprae # 49 197 48 189 189 113 43.0 2e-25 MTDGLDEGPTEEDRRLAADHDDEGVDVALAIARAARGEPAGTPRHDDDGEVLLPPPRRSA ARKRRRRPSTPSWSGPKADGRDPMALGDAFTHLVQSKGWGRQVNLHLVLSRWPELVGPTN AEHSRPVKYQGTVLTVRTEATVWATSLRTIAPQLVAELNRRLGEGTVTRVVIEGPSAPSW KHGPRSVPGRGPRDTYG >gi|302034494|gb|GL383257.1| GENE 95 99927 - 100493 182 188 aa, chain - ## HITS:1 COG:BH1126 KEGG:ns NR:ns ## COG: BH1126 COG1132 # Protein_GI_number: 15613689 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Bacillus halodurans # 7 188 412 595 601 123 36.0 2e-28 MLGLLRPTIGDVRVNGISTRDLDLNQFYESVAYVSQDPPVFDGTIRENLLLQDTQDDKRA LEVLNTLGLGEFLERGRGLDSEVGERGSMVSGGERQQLAIARILIHPKPLIILDEATSAM DSISEERSMAVIQQVASDSILIIVSHKLKTLATADEIIVLESGQLTERGPLAELVNDDGV FNRLWERQ >gi|302034494|gb|GL383257.1| GENE 96 100354 - 101013 303 219 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3006 NR:ns ## KEGG: HMPREF0675_3006 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 219 159 377 377 413 99.0 1e-114 MDFRIALAVLLGYVVLLATTNLMLRRLYALKRNAVVDDELINRSISRIIMEFVSVRILGL GSRELAKTRRLCSENTNRSAKVVATHEFFFAFFALLIIIAKIATIVLFSFGKLSLSVGGL VALLLYMDRVYNPITILNVLYVQYKLDRVSLERLEQFLLLPNDEGLTGGGMPSDAGAFAT DHRRRSRQRYQHARSRPEPVLRICGVRIPGSTRIRWHNS >gi|302034494|gb|GL383257.1| GENE 97 101026 - 101376 324 116 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3006 NR:ns ## KEGG: HMPREF0675_3006 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 116 38 153 377 237 100.0 1e-61 MENLGLNRFQAVLDQVSHNHVSVMTVAVYGGLTVDACVIAYLDEIPKTKLRQGIYYHFKL EAMKKATLVDFSSAKSYGTGALLQRIEAGASAGRQMICDFWLRALREVLPDIIFGL >gi|302034494|gb|GL383257.1| GENE 98 101375 - 101701 56 108 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313765019|gb|EFS36383.1| ## NR: gi|313765019|gb|EFS36383.1| conserved domain protein [Propionibacterium acnes HL013PA1] conserved domain protein [Propionibacterium acnes HL043PA1] # 1 108 1 108 108 177 100.0 3e-43 MKDLITPRTMQTVKSRPEADTAFAKEPDRLFPITCFLTTVAPSPRIGQRAGPQAPPSKDP QRTVARVHALLLGPSPGRSSCHFCHPLKDTSTRAFHRHTLKPVALGSG >gi|302034494|gb|GL383257.1| GENE 99 101784 - 102011 60 75 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTTPIFDRCRSHLDQEDTSTEILHPRHPMRHSVHCQKPFATEVLGLTSYHLDTCDHNKAT STRLPQPLPRHSLGS >gi|302034494|gb|GL383257.1| GENE 100 102010 - 102219 84 69 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRKTVFFVGSLVTVSVLLIPLSTSRRRGSRGTHNRRDCPHLGDSSPTNVMKSNHACTDRT GPALRLGIR >gi|302034494|gb|GL383257.1| GENE 101 102170 - 103357 857 395 aa, chain + ## HITS:1 COG:ML0765 KEGG:ns NR:ns ## COG: ML0765 COG1482 # Protein_GI_number: 15827331 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannose isomerase # Organism: Mycobacterium leprae # 1 393 1 409 410 231 39.0 2e-60 MRALTGQVQHYDWGSADAIPAILGTRPDGTPWAEYWLGAHPKAPSALPDGTPLDQWLTHH PDELGAGSREAFGDRLPFLLKILSANHALSIQAHPSREQAEKGFAAENEAGVPLDAPNRI FRDDWPKPEMIVALTDFDALCGFRDPSSSLVLLSGLGEVDGLNEVLTPLSQNDGLATLVA AVLSGDDDVTPVVKRVVSASRAYLNDGADEDVRSLATTAVELWEDHPGDPSILVALLMNR VRLAPGQQIHLCAGSMHAYLGGTGVEIMANSDNVLRGGLTSKYIDVKALLDHANMTPEPC VGEYAQQISPGVGVYHTTFPEFRLWGLEGHNDVLDLPATELGRILLVTEGQLVAHCGTDD CELSRGQSVWLPAGDEVKVTGQGRGFLASAGVGDS >gi|302034494|gb|GL383257.1| GENE 102 103256 - 103456 98 66 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDVEGACERFDPLTRLPVPSGGSRRQQRYATFHSGVPYPSTCQESTSLTSHFHLVPGRQP DGLATA >gi|302034494|gb|GL383257.1| GENE 103 103599 - 105671 2099 690 aa, chain + ## HITS:1 COG:MT0005 KEGG:ns NR:ns ## COG: MT0005 COG0187 # Protein_GI_number: 15839377 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Mycobacterium tuberculosis CDC1551 # 43 690 23 686 686 745 57.0 0 MSQPEMPESVTDGDTPEDLLIDATDHPDGLDSELPPTAVDGSYDAGQITVLEGLEAVRKR PGMYIGSTGERGLHHCVYEIVDNSVDEAMAGYCDTIQVELLDDNWCQVTDNGRGIPVKEH PVEHIPTVTLVLTKLHAGGKFGNGGYKVSGGLHGVGSSVVNALAAHFIVEVRRDGYHWLQ SFSLGEPDGPLEQFEALGPDDHEGTTVRFQPSDEIFDAIVFDYQTLSNRFREMAFLNKGL RIVLTDRRADHADEDGNPVHEDFLYKEGLKDYVRFLTGTRDVINPTIISLESHRPEEGMG LEIAMQWNTSYATSVHTFANAINTIEGGAHEEGFRAALTNTVNRWGETWGLIKKREDRVS GDDIREGLTAVVSIKLTEPQFEGQTKTKLGNAEAKSFVQKALNEKLSDWFEENPNEGKSI VRKSQAAAQARVAARKARDLARNRKGLLGSTSLPGKLKDCSSTSPEECEIFIVEGDSAGG SASQGRDPRIQAILPLRGKILNVEKARLDRALGSETIESIINALGTGVHEDFDLDKLRYH KIILMADADVDGAHIRTLLLTLLFRFMRPVIDAGHVYLAQPPLFRLRWTNSPHELAYSDE ERDLLREDGLTHGKKLPQVNPIQRYKGLGEMDAEDLWDTTMDPDKRLLLQVTLEDAALAD QMFSILMGEDVEQRRSFIQRNAKDVRFLDI >gi|302034494|gb|GL383257.1| GENE 104 105713 - 108388 2380 891 aa, chain + ## HITS:1 COG:Cgl0012 KEGG:ns NR:ns ## COG: Cgl0012 COG0188 # Protein_GI_number: 19551262 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Corynebacterium glutamicum # 20 873 6 848 856 977 59.0 0 MADDEKPDEQNQADRQGLVTGRHVGIQPVEIRDEIQNAYLDYAMSVIVGRALPDVRDGLK PVHRRVIYAMYDGGYRPDRGWNKCSRVVGDVMGKYHPHGDSAIYDTLVRLAQPWAMRYKL VQGQGNFGSQGNDGAAAMRYTECKMAPLAMEMVRDIDQDTVDFQPNYDNKETEPVVLPSR FPNLLVNGSSGIAVGMATNIPTHNLREVNEAVQWSLAHPNASHEELLEACMERIKGPDFP GGALIVGRQGIEDAYRTGRGSVTMRAVIDMEEDKKGRQCLVVTELPYMCNPDNLATKIAD LVNSGRINGIADIRDDSSARTGQRLVIVLKRDAQPRVVMNNLYKHTALQDTFGCNMLALV DNVPRTLRLDQFISYWIDHQMEVIRRRTEYRLAQAEKDAHIQRALVKALDMLDEVIALIR RSPNTEAASTGLQELLDIDEIQARAILDMQLRRLAALERQKIIDRLEELERLIADYKAIL ASEDRQREIISTELAEIVDKYGDERRTRIIAADGDFSEEDFIPDDDVVVTITRGGYAKRT RTDLYRVQKRGGKGVRGASLRADDEVAQLFTTTNHQWILFFTNMGRVYRTKVWQLPEAGR DARGGHVAGLLSFLPDEKIAQVMTLRSYDGAEYLLLATRKGMVKKTALKAYDSSRQAGVI AVNFRTEDDELIGAEQCSAADDVLLISRKGQAIRFSAGDDQLRPMGRATSGVTGMKFRGD DELLSMSIIHSDMPEDDRFVFTATGGGYAKRTAVSEYRQQGRGGVGIKAMALSEERGSLV GGLVVSEADEIIAIKTSGQITRSAVSEVPAKGRSTMGVKFVSVRGGDAVSIIAVNPEHTV EEEVADESVETVEGDATQAQSGGVVRRSDTVDDDRAVDTAGNDMKPEDNGE >gi|302034494|gb|GL383257.1| GENE 105 108381 - 109013 553 210 aa, chain + ## HITS:1 COG:no KEGG:PPA0011 NR:ns ## KEGG: PPA0011 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 210 1 210 210 405 100.0 1e-112 MSDEKKVTHPGPDDPEAIHWTAGDARRTFHEKGEERPDPRQESDRKRTTASTPLRRTDSR GAQGEKAPNQQEPHRSPQAHQPARAPRRTRKARLRLTRVDPWSVMKTSLLFGVAGAVIFF IATWIIWGIIGASGAFDSMNKVVNDLISSPSSTSKFELSDYVNTGRVLGLTALIGAINAV LFTAISTLFSFLYNLAAQIMGGLEVTLAED >gi|302034494|gb|GL383257.1| GENE 106 109112 - 110080 826 322 aa, chain - ## HITS:1 COG:CAC3552 KEGG:ns NR:ns ## COG: CAC3552 COG0039 # Protein_GI_number: 15896788 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Clostridium acetobutylicum # 7 315 8 312 320 196 36.0 7e-50 MSIAPHLVVIGIGHVGSDVVTNAAALGLFSRISLIDVDKKVRDGQALDNHQATAVAPAMT TTITAANYDACRSADVIIVSAGPSVLPDSYGGGHDSRNSLAQVNSKVIREVMGNICQYTH SAPIILITNPLDVNVHIAATEFDYPTNLVVGTGTALDSARLRRHLADWAGVSPDSVQAFM LGEHGATAFPYLSHASIGGLTLAEATTALGLQPLSPDQVGNSVVQSAFDILEGKGWTSSG ISKAAVSLARAMLLDQRSIHPVCTLADGVLGFHSEVSLSLPTVVSGHGVEHHLNIVLDEW EQEKLLVSAKAVREVYESVRPA >gi|302034494|gb|GL383257.1| GENE 107 110353 - 110550 231 65 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313765011|gb|EFS36375.1| ## NR: gi|313765011|gb|EFS36375.1| hypothetical protein HMPREF9567_00650 [Propionibacterium acnes HL013PA1] hypothetical protein HMPREF9579_00509 [Propionibacterium acnes HL087PA1] # 1 65 7 71 71 129 100.0 5e-29 MSTLWKRFHECVIYTEPHSALSVKGVLQNPPHVPGYPCQSLINYVLIKAVAILHTTQGRA MRSGN >gi|302034494|gb|GL383257.1| GENE 108 110598 - 111605 742 335 aa, chain + ## HITS:1 COG:Cgl1222 KEGG:ns NR:ns ## COG: Cgl1222 COG1609 # Protein_GI_number: 19552472 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Corynebacterium glutamicum # 6 328 14 334 369 216 37.0 4e-56 MTHKPTIKDVARLAGVSLGTASRVLNGSSATSEASRSAVHNAAHELGYLSNAHARSLRSS HSGVIGLVVPDIRNPYFAELASVVENACLAYGWATLLCNADESPDQFNRYVNTLRRQRVD GAIVTPTGSGGQAVKDLVDDGVQVVCVDREITGSPLPAVTSDPWNGMRQAVHHLVDHGHR RIGFITGPQQTSTGLERYQAYRQLLAEHGLEVDEDLVVEGDFQEESGRMGARRLLDGGAT AIFASDSLMSMGALRTCIDQGVRIGDEIDLVGFDDLPVFSLTNPALTVVAQDIDAMGKVA VDLLNRAMSGEPTSSARLDTHLIVRASTRMVKENQ >gi|302034494|gb|GL383257.1| GENE 109 111602 - 113107 1055 501 aa, chain + ## HITS:1 COG:Cgl1223 KEGG:ns NR:ns ## COG: Cgl1223 COG1129 # Protein_GI_number: 19552473 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, ATPase component # Organism: Corynebacterium glutamicum # 4 494 16 506 524 593 66.0 1e-169 MTTVLRLDHVTKAFGPVKVIQDVSVDVIPGRVRVLLGENGAGKTTLIKMMSGIYHPDSGS VVIDDTPVELPTVKAAEARGIATIHQELNLVPQMSVAENIMLGRTPSRGGLVNWGLMRAQ ARAALERIGLDVSPDRLVGSLSTAHQQLVEIARALSMDARVLILDEPTAALTRKESGQLF EVMDDLKTKGVAMVFISHHLDEIPRVGDDVSVLRDGTLVGEVPARTSERELVTMMVGRDI DDQFPRHRGEVGEVLLSVTGLSRERAFQDVGFDLHAGEVLGLAGLVGAGRTEVLRAIAGA DKYDSGTVRVRGKELPKGKISRAIVDGIGHVPEERKSQGLVLDASVNENLGYATMKSTSH AGLVDRSGQRRRAQNVAEKLRVRMASLDQPVRNLSGGNQQKVVIGRWILADSSILLLDEL TRGVDVGAKVEIYQLINAVTDAGGAVLMVSSELPEVIGMSDRILVMSHGRAMGILDAKAA TEDAVMELAVASVDPVDEKTG >gi|302034494|gb|GL383257.1| GENE 110 113190 - 114167 1054 325 aa, chain + ## HITS:1 COG:Cgl1224 KEGG:ns NR:ns ## COG: Cgl1224 COG1172 # Protein_GI_number: 19552474 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Corynebacterium glutamicum # 23 322 2 301 304 353 78.0 2e-97 MTTTSTATTQRPSVGRKVGSWSLNHGALVGLIILCIALFIATPVFLTVPNIINIGIQAAV VAIMAFGMTFVIVTSGIDLSVGSVAALSAMVSAWMFSNAGLPGWLTLIIGLLIGLLAGAV SGLAIAYGKLPAFIATLAMMSVARGLTLVISGGTPVATSDAVNQLGADVGPIPVPVIMLA LAGVVCWFMLSRTVLGRSLYAIGGNEEAARLSGIPVRRILVTVYALAGVFAGLAGLVLAG RLSSAQPQAGFGYELDAIAAVVIGGASLSGGSGKASGTFIGAVLLAVIRNGLNILNVTSF WQQVVIGCVIALAVGFDVFRSKKES >gi|302034494|gb|GL383257.1| GENE 111 114216 - 115157 999 313 aa, chain + ## HITS:1 COG:Cgl1225 KEGG:ns NR:ns ## COG: Cgl1225 COG1879 # Protein_GI_number: 19552475 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Corynebacterium glutamicum # 14 313 11 314 314 276 61.0 3e-74 MKFKSTKVLATAVAVTIIATGVAGCNRDGGAGSSASGTVVFAVSTQTNPFFVQLVDGAKK EAKAKGVNLQVQDASDDAATQANQLANAVSTSAKVVIVNPTDSDAVAPSVKALNKAKIPV ITVDRSSSSGDVASFIASDNIAGGIDAAKKLAEIMGDKGEVIHLQGTPGASASRDRGKGF SEEIAKHPGIKVVAKQTANFDRSKALDVTTNLMQAHSKATGIFAENDEMAIGAISALGSK AGQSAKVVGFDGTADGIKAVKAGTMGATIAQQPALLGKTAVDQAADILAGKQVSKTTPIK VVLVTKDNAKDYE >gi|302034494|gb|GL383257.1| GENE 112 115154 - 116083 676 309 aa, chain + ## HITS:1 COG:Cgl1331 KEGG:ns NR:ns ## COG: Cgl1331 COG0524 # Protein_GI_number: 19552581 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Corynebacterium glutamicum # 1 296 1 297 307 209 48.0 6e-54 MSGATAKVTVVGSINADMRVGVERFPGPGETLAGGEATLTPGGKGANQALAAARCGVQVA MVGAVGKDPTAETALSLLSEGVGLDGVVRRDVLTGTAVVMVADSGENSIIVIAAANGTVD AQTVRAQAERIQDADVVVCQGEIPPDGIAEAARGAKRFVFNLAPVVDVDPEVIRMADPLV VNEHEAALVALALGSTTSRLEDDPDAALRELLNLGCRSVVITLGSAGCIVGGPEGFDAVA AATVKAVDTVGAGDAFVGALAAELARGRTLVEGCRFATAVATLTVTKPGAQASYPSADEV ESIRRGEHA >gi|302034494|gb|GL383257.1| GENE 113 116080 - 116463 276 127 aa, chain + ## HITS:1 COG:Cgl1226 KEGG:ns NR:ns ## COG: Cgl1226 COG1869 # Protein_GI_number: 19552476 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type ribose transport system, auxiliary component # Organism: Corynebacterium glutamicum # 1 127 1 123 123 131 57.0 2e-31 MKKSGLLNPQLCAAVARLGHTQTFVVADAGLPIPHEVPVIDLAVVLGTPRFQEVFDAILD EVVVDGATIAHEALGHEPESWVRERIEEVRTVSHEDLKKALPNVSFVVRTGETTPYSNVI VRCGVPF >gi|302034494|gb|GL383257.1| GENE 114 116634 - 116915 139 93 aa, chain + ## HITS:1 COG:no KEGG:PPA0020 NR:ns ## KEGG: PPA0020 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 5 93 1 89 89 167 98.0 2e-40 MRTLLVTRGIVTFRGVASAMCSRLCAMSVWGPLEFGRGWQRIRTAVEAAMKADYTDQVVR PALGEWVDESMATTRGSSVLLLFIFQPFQKQLL >gi|302034494|gb|GL383257.1| GENE 115 117067 - 117543 440 158 aa, chain - ## HITS:1 COG:lin0503 KEGG:ns NR:ns ## COG: lin0503 COG1762 # Protein_GI_number: 16799578 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Listeria innocua # 18 147 19 148 155 95 41.0 3e-20 MSVLLNTDLISVNIEAPDRNQVLTVMADKLNGVRVAKEGFLDALLKREEIYPTGLPISCG VAIPHTDPQYVTRDALAVTTLHTPVLFGQMGGSEEDEVPVSVVILMALSNADDHLNMLQN IVKSIQDDNLMQTIRSATKPEEVVSIVRPLIPADTEDS >gi|302034494|gb|GL383257.1| GENE 116 117600 - 118856 1098 418 aa, chain - ## HITS:1 COG:SA0238 KEGG:ns NR:ns ## COG: SA0238 COG3775 # Protein_GI_number: 15925950 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIC component # Organism: Staphylococcus aureus N315 # 4 418 8 418 419 228 35.0 2e-59 MSIIKGILDVGAVVILPIVMLILCLIFRIPFGKSLKAGLMIGIGFSGLSLVIGFLMTSVQ SAVDYYRHMGGGFTTVDVGWAAVGAASFGVPFAAPAILLVVLINVVMILAKMTNVLNVDI WNFIHFLVPGTLAYALTNNAWIGLGVVLVLSVIDLIVAQHIAPKWQEYYGLTGTTCSTLS YITSAWPIAIGLNWVIDKIPGVRKIDISMEKFGDRLGFFGDTAFIGLIVGIFLGLMTRQP WQGVLVMGMGIATVLVLLPRMVSVMMEGLSTVGEGAKTFMKRHLGKNKDGSERELSIGMD VALALGDPAAITITVLMIPLCIAFAFIIPGMNYFPVGMLTVIVYMMPMICLACNGNMFRS LIIGAIYMFFVEWGASFFAPEATAMMHATGVHVSGSVTDAFFGYNLPNIIISAIHRMF >gi|302034494|gb|GL383257.1| GENE 117 118877 - 119179 336 100 aa, chain - ## HITS:1 COG:STM1613 KEGG:ns NR:ns ## COG: STM1613 COG3414 # Protein_GI_number: 16764957 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIB component # Organism: Salmonella typhimurium LT2 # 6 89 4 87 93 58 34.0 3e-09 MASEVKVLVACGSGIATSTVAQEKVKEILRDAKIPAKITKGTVGQLPVLQNGVDVIMLTT RYGKPLNKPVIQVFGLISGINEDAVAEEIISTCRDILNQS >gi|302034494|gb|GL383257.1| GENE 118 119169 - 119552 249 127 aa, chain - ## HITS:1 COG:mlr7108 KEGG:ns NR:ns ## COG: mlr7108 COG1063 # Protein_GI_number: 13475922 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Mesorhizobium loti # 5 63 1 60 341 59 50.0 1e-09 MAEMMNAALMYGPGDIRVEQMPKPTCPPGRFVLRVDAVGLCGSDIRNLTTDSRKGDYPFI YGHYGATSVQVQKAFELVINDKFPAEQVISKVLPLSRINDAIEFTRTGEALRVVLVPDGK ESEHHGK >gi|302034494|gb|GL383257.1| GENE 119 120304 - 121719 614 471 aa, chain + ## HITS:1 COG:lin0325_2 KEGG:ns NR:ns ## COG: lin0325_2 COG1762 # Protein_GI_number: 16799402 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Listeria innocua # 330 468 1 139 143 75 28.0 2e-13 MDAVVGQNDKINRYLPDVRLSDIENLVVETLRDYYLEIDDIRLSNMVVNIAICVQRYSFP IEDNAATDLMMGNQSEMLCDQLLVGLRKLYPERPLSSADDVYLRSIVGATLGFGHGEFDH HSDSCDIYSTVSRCLDDTVEHFGLVIAKEELYGSVSKHVGRLMAHAPSMLYFRNTLRESL RSRSPFLYDAAVYLADKLSRLLGIFFTDDEIGLLAIYIGLYSEPAPNPNLVTAVVVCPRY QALRDVLLAGLVDHFADRMRIVDIVSSVAEADTCDGDIVISTTEEPSHRHTCVPISALML DLDLSAIDSALLRASEKKSRIATASAMKRFLDPTLFFTGRSFDSWRETLDFMCGSMERNG IVPDAFRESVFLREGYSSTVFFRTFAVPHAMNFLAYETKIAVLIPSTPINWETSDVSLVL LLAINEGDYDDFVRFYQPLISVLYDRELFTELRSMSSYHEFMKFLDKQISM >gi|302034494|gb|GL383257.1| GENE 120 122292 - 122507 88 71 aa, chain - ## HITS:1 COG:no KEGG:PPA2391 NR:ns ## KEGG: PPA2391 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 18 71 41 94 94 101 96.0 9e-21 MFTYWTRRDKVPLSLRIFDERSMVVVDNSHDAKMLWVQQCSDYSDQVIARRTSLYLQCHD KLSQIVEDKAY >gi|302034494|gb|GL383257.1| GENE 121 122654 - 122869 107 71 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3027 NR:ns ## KEGG: HMPREF0675_3027 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 71 1 71 71 115 98.0 8e-25 MPAAAEFVLAPQTMVARRFDVFDTVVVASGHATVASTLRACPSQGRYRLLKLLSEVAVGV ACAHGVTAEYI >gi|302034494|gb|GL383257.1| GENE 122 122780 - 123163 60 127 aa, chain - ## HITS:1 COG:no KEGG:PPA2390 NR:ns ## KEGG: PPA2390 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 73 127 1 55 121 97 94.0 1e-19 MQPVGWVTSRVSSPDRIAHERPSCPDKSGSVKVTGKRTSLLLGENSSDHLRGCAVSNRRW FLVQTARTRWSLVQHPGAIDQVALFQVTHDAPQKAVRDLDVLGSDAVGASYSHSDLREEF EKSVTAL >gi|302034494|gb|GL383257.1| GENE 123 123177 - 123518 249 113 aa, chain - ## HITS:1 COG:no KEGG:PPA0029 NR:ns ## KEGG: PPA0029 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 113 111 223 223 206 94.0 2e-52 MKLERLLITPGGVLALLHPTSPDADEFRTYTLGHELGPNAYREGILSPRDLWYVSLLHFR GPIEHPKDLVAWSHQQLAPTTWTFPDAALCTYETTTTAMRPRIRHTAAFGRAI >gi|302034494|gb|GL383257.1| GENE 124 123871 - 124515 285 214 aa, chain - ## HITS:1 COG:YPO2562 KEGG:ns NR:ns ## COG: YPO2562 COG0637 # Protein_GI_number: 16122780 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Yersinia pestis # 8 204 2 205 220 121 36.0 9e-28 MTRTDPRLADFQAVLFDMDGTLVDSTVAVESVWSAWAERNSIPTADVLAWCHGRNVAATI THFLPHITPETLQSMVSAQLDQECTQLDSVKPAVGGWELLIWLDAHRIPWGVVTNAPRRL ALARLGAATIDPPLLVTLEDVEHGKPAPDGYLHGARSCGVAPTRALVVEDSASGLAAARS AGTVVVAVGGRRDADVVCHDLVDLHRLLVQIRSK >gi|302034494|gb|GL383257.1| GENE 125 124502 - 124633 62 43 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313826226|gb|EFS63940.1| ## NR: gi|313826226|gb|EFS63940.1| hypothetical protein HMPREF9611_00524 [Propionibacterium acnes HL063PA1] # 1 43 40 82 82 84 100.0 2e-15 MHASGVAHIWQRIWAVLSTKGLAITASVCRQLAGQDGDNNDTH >gi|302034494|gb|GL383257.1| GENE 126 124632 - 125390 365 252 aa, chain + ## HITS:1 COG:Cgl0107 KEGG:ns NR:ns ## COG: Cgl0107 COG1349 # Protein_GI_number: 19551357 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Corynebacterium glutamicum # 6 248 6 249 260 181 45.0 1e-45 MIKLFRQKMIINSLGTSPTSVDTLVELTGASPATIRRDLTDLEGHGQLRKVHGGAVAVNL RGTPMPYSLRSAENAESKTAIAQLVSRLVTDDMSVIIDNGSTMVAVAQALQERPITALCL SLRAALPLGGGGVATVSTPDGTLMPESLRYEAASCLRALGEFRADVAIVGTCSASPAMGL TVTTHQDAQVKRAILASSARVVLAATGVKLSRTSSFRFGDIEDIDDLVTTRDAPQVTLDA FRVAGSRVYVAD >gi|302034494|gb|GL383257.1| GENE 127 125487 - 125699 107 70 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLRVWGSIPIMTGPRVVLILALLRSALMVSIGRHSYFGWHIPLLSLYRSGSAQDRANKMK ASPPPKWAAE >gi|302034494|gb|GL383257.1| GENE 128 125608 - 125781 60 57 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLTINAERRRARISTTLGPVMIGMDPHTRSITIDVMDGQETAIAGGRVTTVAPRPPS >gi|302034494|gb|GL383257.1| GENE 129 126007 - 126744 457 245 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3034 NR:ns ## KEGG: HMPREF0675_3034 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 245 1 245 245 450 100.0 1e-125 MVKEQRPCIIGTVAISTTLHLAPNDIGAFTDTDELRILMESAESHGYFDPPPLENREYLI ERPIGVVVSDTSQPEYLTLRLDCNPERHILGRPGMKIMLVLADALRLIGLSTPQSIDVEC VYFDPRDWDLLNPDPEDHIHMIGTLSREVCRWMSPHLTHTWHTTATTNPDLDPHLAQNTI NRWFPPDFEYPWLGHTPQAHQETLTWHMPDDITALGWLFDLITLLQGQPPQHIHATPNEQ KIRPW >gi|302034494|gb|GL383257.1| GENE 130 126738 - 127262 307 174 aa, chain - ## HITS:1 COG:no KEGG:PPA0033 NR:ns ## KEGG: PPA0033 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 4 174 9 179 179 256 92.0 2e-67 MYQKPAVALLALTLALAVPATASASPTTSPSPTASGNSDLRPEQGSAKVASKAAPFISKI DDPHYSSSHAGSVNVHGWWLDNYNNFSGMKARVTVYLWAKKGSQWVQVNKIPTKKNPVTV YAGGGGGKRASGSVSCRSHKPTWYHGQVDVDIIDAIDTSNRPNSQDRKLNCQPW >gi|302034494|gb|GL383257.1| GENE 131 127241 - 127498 151 85 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|328756045|gb|EGF69661.1| ## NR: gi|328756045|gb|EGF69661.1| hypothetical protein HMPREF9579_00532 [Propionibacterium acnes HL087PA1] # 1 85 1 85 85 151 100.0 1e-35 MTASQRSRRDLPLACRAVVLEQHRVGPDSRHPPIQRSLELFHTPPTVVVAMLYYIWHGPA TLYLTPILRLTPSGDTSYLCIKNPL >gi|302034494|gb|GL383257.1| GENE 132 127411 - 128469 782 352 aa, chain + ## HITS:1 COG:MT3881 KEGG:ns NR:ns ## COG: MT3881 COG0079 # Protein_GI_number: 15843395 # Func_class: E Amino acid transport and metabolism # Function: Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase # Organism: Mycobacterium tuberculosis CDC1551 # 1 340 1 340 353 274 46.0 2e-73 MSQDRRDVVRGLPLYKQGASHGENAVKLSSNENPFEPLPSVIEAVTRTLPRFNRYPSMSA EEVRSSIAGHFGVDVSQVAVGAGSTEVASQLMHAFAGAGDEIIFPWRSFEAYPILTQVAG ATPVPAPLTKDLRHDLDAMSAAITDRTRLIFLCTPNNPTGTVLHTDEVVEFLARVPQNVV VVMDEAYYHFNRDDAAVDGLTLLNDHPNVVVLRTFSKAYGLAGLRIGFAISAPEISDDLR RVATPFTVTTLAQQAAIASLAAEDELNERVNRIVAERTRVFDELTRQGWKIVPSQANFLW LVTGDDTDRIDEVMVSHGVFARCWSGEGIRLSIGLDAENDRAIEALSQAVKG >gi|302034494|gb|GL383257.1| GENE 133 128473 - 129351 733 292 aa, chain - ## HITS:1 COG:Cgl1119 KEGG:ns NR:ns ## COG: Cgl1119 COG4667 # Protein_GI_number: 19552369 # Func_class: R General function prediction only # Function: Predicted esterase of the alpha-beta hydrolase superfamily # Organism: Corynebacterium glutamicum # 4 290 8 294 298 246 44.0 4e-65 MTTSIDGTALVLEGGGMRAAYTSAVIVKMLGLGWKFPHVSGISAGSSLTANYISRDPERT RLSFTDFVADPRFGNLGTWLAGRGYFDGEYIYQRTAEPHQALPFDFLTFCASSQAFRIGA TRTSDGGQEWFTREDMKTMNDLMVRVRASSTMPGFMPPVTIEGVEYVDGALGDSGGIPID GAQLDGYDRFFVVCTQPRDYVKNEIKRPQVLRQLFRRRPSVAEAAIARPAKYNATREMLR DLEADGKAYVFYPRVMPVTNKEKNVTKLRQAYALGMAQVNAELPQWRDFLGV >gi|302034494|gb|GL383257.1| GENE 134 129403 - 129969 461 188 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|239918508|ref|YP_002958066.1| acetyltransferase, ribosomal protein N-acetylase [Micrococcus luteus NCTC 2665] # 19 187 24 196 204 182 52 2e-44 MTRPRDVPPCDGPAQVGKVEVCPLVEEDLEWLWHWNVEVVDPQWKQWDGPYFGPDDDRSF AEFAEEWRSGLMSGHRAVVTVDGRRAGFVSRFEEPPAGGGWWEVGIVVFRPTLWGRGVGC RALRLWTEATFATTDAQVVTLTTWSGNGRMIHCAGAVGYRECGRIPQARSWQGRRWDLVT MALLRDDL >gi|302034494|gb|GL383257.1| GENE 135 129983 - 130642 355 219 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3038 NR:ns ## KEGG: HMPREF0675_3038 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 219 1 219 219 395 100.0 1e-109 MRRGVVTSVLLACTLVSGCSTLKPLTEPQPTPTVSASKVPQGIDAHPAWAVPVARSGKKL GHFGDDRIRIEVDQAAIAKAPEDSIMVNPQDGTPVVSKGSSIVLVRYIVTNVSQEPINLG LGTVTITARYPDWTWRQPLVSVLAPRADAAHKIVTTPFAPGTARPPYVLGLGESFMVGAN YPYETAEQLDVTATVVVCDTAGAVDPGLGWTITGKVHLA >gi|302034494|gb|GL383257.1| GENE 136 130895 - 131533 311 212 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3039 NR:ns ## KEGG: HMPREF0675_3039 # Name: not_defined # Def: SAF domain protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 212 1 212 212 347 99.0 3e-94 MSVTTTPISARATTPSPRLRRSPRLIVIGVLCACLGGLGGAVAWHRASHADQVLVMTRAV GQGDIVRNADIGLTSVAVDRAVATIPASQLDKIVGRHALVDLSPGQLLGSHSVGELRVAP GRARIGLKLAAGRLPTVSLPAGARVTVIETSPDKDTGTVSNLSTADAVVVAAPKATNDHG SWLVDVEVDSGNAARLADLASLDRIALVERGQ >gi|302034494|gb|GL383257.1| GENE 137 131533 - 132351 391 272 aa, chain + ## HITS:1 COG:no KEGG:PPA0040 NR:ns ## KEGG: PPA0040 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 272 1 272 272 480 99.0 1e-134 MSIILLTSPGGAPGLTTTALGLALTWPRDVVLVDADPCPGHVIESGYLTGRIPPRPGLIG LATAFRDGADPVQTMWEETIPLPHDSGDRMVRLLSGYGHLGQASLMGAAWSSLASAMIDL GQAGVDVIVDAGRLGPETLPGSLVSRASLIGIVTGSRLRQLAGLSMRAEEVEAMSSATTG TVGLVIVGPGRPYNSREIGHQFGLPVFGDVVFNAHAAAVLSDGEPAGKRWSRGRYVTSMQ SMAESMRERIRRADQAITGPEILSTSAMGVAS >gi|302034494|gb|GL383257.1| GENE 138 132348 - 133826 633 492 aa, chain + ## HITS:1 COG:PM0849 KEGG:ns NR:ns ## COG: PM0849 COG4962 # Protein_GI_number: 15602714 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Flp pilus assembly protein, ATPase CpaF # Organism: Pasteurella multocida # 132 455 64 371 425 121 31.0 4e-27 MTIDHAVSRYAQDAPVVPLDDGKDLAGVLSRISPSPHVSPAAVSPRPNPRRFEAKDIDWR TVVSLRRKASERISSERASHRERTGVDLSGDDVRMLGRSIVRQAVESHAEKLTAEGQALW SAQTKDAYVRAVMDAIFGYGRLQPLFEIQDAENIEINGCDRVFVQYGDGRREPGPVVADD DAELVEAIRFLGESANPPRPFDDAHPTMTVALGSQYRLHAIGFGLSYRPSVVIRHHTLTR VTIDDLVNTAMMPHHVGVLLRAAVLARRSIVIAGDQGAGKTTLLRALVDAIPPTERFGTL ETDYELLTHLNPDRDNMVAFQATVGLGEKVDGHCVGELTVADLVPEALRQNLSRLVVGEV RGAEAAAMFEAMQAGAGTMSTTHSHSATSTMDRLAGRVAMGGVMTIEEAYRQIAHNITFL VHVTLVDDTWRGGTRTRYITEVRQLTGALENGRPVTHLTYAAPTPTSPGVFHPDSALVAE LSRYEPEVTRWV >gi|302034494|gb|GL383257.1| GENE 139 133817 - 134698 460 293 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3042 NR:ns ## KEGG: HMPREF0675_3042 # Name: not_defined # Def: type II secretion system F domain protein # Organism: P.acnes_SK137 # Pathway: not_defined # 3 293 1 291 291 375 98.0 1e-102 MGMNTAIAALLGGLLVGGVVMVGIGIAPIHQLSTGQSTSLWTRVDNWFSRLPRRSRVHGL TGLGIGVVGYVVTGWAVLLVIVPVLAVVVPALLADPPRHDLDVMRALERWVRLVSGSAST GKSVIDAIRATRRQAPEPLIEPLTRVVARLDSRWDTRSALQGLADDLDSADADQVIAAIM MATERGGTGATGTLDALAASLQERIRAAREIRVERAKPRVVVRQVSIIIGVVLAGALILG REYLVPYRTGVGQLLLCCYAGLYLAGLIALSRRSKPRRRARILLRRAGEANYG >gi|302034494|gb|GL383257.1| GENE 140 134691 - 135593 648 300 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3043 NR:ns ## KEGG: HMPREF0675_3043 # Name: not_defined # Def: type II secretion system F domain protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 300 1 300 300 474 98.0 1e-132 MAESTVILAAICGSLLACAPVFVVSGRRNAPLRLSDALAGLSDYGRQDAVVGPVAEGGRL ERWGTRAAIRWPRMVSERSRRTLILQGRTPGDLVIEKAVMAMGGMLVPALARAVAAACGD TLPVTPVGLAVVLAVVGWFIPDTRIRSRSKAVRQDAAEVVLVYVDLVTLARLANQSAPRA LVEAAQMSDHPVLTRIRMTLERSRLEQQSPWAGLDGLSDELDLPELAELVEVLRLDDQGA SLAGALRARVHEMRDAHLNQEKAEAQTASESLTIWMVIPVLVLGLVLITPPLLIMAGVAS >gi|302034494|gb|GL383257.1| GENE 141 135681 - 135875 171 64 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3044 NR:ns ## KEGG: HMPREF0675_3044 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 64 7 70 70 94 100.0 2e-18 MKHVNTVASVVLPMIAGIPPLVEKRDERGLSQSTENAILLVGAVSIATVVVTVIKGYVSS NLPK >gi|302034494|gb|GL383257.1| GENE 142 135944 - 136252 202 102 aa, chain + ## HITS:1 COG:no KEGG:PPA0044 NR:ns ## KEGG: PPA0044 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 13 102 131 220 220 97 100.0 2e-19 MWPVVLLVVVAVIQTAVVLQARATVTEAARAAVRVQALRGSHAGEAEATARDVAQTSKVT DVTVTVSTTDSLVRVDVEGRAAALFGAVVAVRGHAVAVEEGT >gi|302034494|gb|GL383257.1| GENE 143 136402 - 136758 163 118 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3046 NR:ns ## KEGG: HMPREF0675_3046 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 118 52 169 169 193 98.0 2e-48 MIAAVATGSWRISEVKADAQSAAQVAARAGSVASSVGEGIAVGQRVGLAELAGTRCSNPA IAVDSSDLTLPVGSAGTTSARVSCTIKLSDLLVPGMPGSFHIESVAHSTLDSHRERYS >gi|302034494|gb|GL383257.1| GENE 144 136755 - 139517 996 920 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3047 NR:ns ## KEGG: HMPREF0675_3047 # Name: lysM # Def: LysM domain protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 920 1 920 920 1586 98.0 0 MKISPVRARIHGALAVVALLLLVVGSPAALVAWGHLDATTVLRPAGWLAPDDGSIFLTVV TVIGWAAWTVFCVCVVAEAVGMATSQRHHVKLPGLGAIQEIAAGLLVASLTVLSPLTRSA VPPAPVSLVATAAAAPQPAPEAQMDSDSGHDEDVMTVTVGPHDDLWTLAETWYGDGTSWR RIVAANPDVDVDHLVVGQRLALPGATVTVPAGHTGAGRPIDTEQLNQIAPPSEMSKVRTI TVEQGDTLSGIAQTQLGDASSWPAIWHLNEGIIADPDHIEPGWELVLPDSPTVDKRASDQ HTDEQGGKREKSTPAETPTTESTPPVLPEGGGDSTATVNETKVEPHTAAGADQAVSMAEV GQSPAEILRTALAGLSLFLAGGVAGTVTTRRRQQLFTRPLGRRIPPVSGEPRRAKRVLDA AADQLDESASSRDTAALAMTPTTVVLGTCDPQTPVVVDLADVGGVLAVNAARDLATAMVA SISLSLVAAPWSGGIDIVAVGEDLAWLAHTGSDDVQLADEDEVVEGLAGLSNEASEYPAT ITRVVLSLSPLNLPSPASLAAAGIVIVMPGVGGQKITVTDCDHAEFHGQSFTPQIVTSPM RRAVVELLETTARSDTEPAPWWEPRRGDEEGSDPPPVMDKPCAVLPPSDAHLTVEEETVL TSTMTSDVAHLPATGGQVPSPILRLLGPVDLLGARGNPPTKARRQCLEYCAWLLCHPGAR SVQMADALMVAEPTRRSNVSRLRRWLGTDDAGRAYLPEGYDGSLRLADAVTSDWERLELL VSGGVSTAPLANLVSALDFVRGAPLADAAPGQWHWAEEWRIDMIQMVRDIGVEVARRAME IRDVELASRALARATVACPEDEVLLVARIKLADELDDRGEVERLVYVLSRQARRLGVDLS EETITVLQEVMEGHARARVV >gi|302034494|gb|GL383257.1| GENE 145 139571 - 140914 1084 447 aa, chain - ## HITS:1 COG:MT0042 KEGG:ns NR:ns ## COG: MT0042 COG0477 # Protein_GI_number: 15839414 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Mycobacterium tuberculosis CDC1551 # 3 399 15 400 433 134 28.0 3e-31 MFWQNLRHLWRRRDFRKILGVRVATQAADGTLQVGMASYVLLSPEQQPDAWSIAMVLAIT LLPFSIIGPFVSVVLDRWSRQRILVYTDGLRCLIAVGLGILVWNGARDKPSHLALLIGLL IAMSLNRFLLTALVAGLEYTIDKRDYLTASSIMPTIGPLGLMIGAVVAAAVRMIAGRHIP VHHADTIIFCISAALFAVSVALGLQFSRRELGPPPVDRSRTMRAVAGDVVDGFRYLGKVP LVGHSLTLIGAQRVLFGVYSVAMILGYRNRFHVQSDINGAMADMTVWAVAMGAGFVLSAG FMPVLVHRLGMRRALMALLTATAVIQAFPGATPNRWGLLVAGFFVGLFAQSLKAGVDTIC QAHITDGYKGRVFIAYDMVYNAMFVAGSALAALVLPIQGLSGPHIVGLAIAYAVVAVVFA LATRAHGNDVFDKGSALGGLPAANPEE >gi|302034494|gb|GL383257.1| GENE 146 140845 - 141090 70 81 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MATVHVVLRPQVGVFPVLLRRPCSLIDEANLAGPLRWIPRECSSVHPLGSIEASPKETMC SGRTCATCGDAATSGRFSGFV >gi|302034494|gb|GL383257.1| GENE 147 141284 - 142993 1449 569 aa, chain + ## HITS:1 COG:CAC3201 KEGG:ns NR:ns ## COG: CAC3201 COG2759 # Protein_GI_number: 15896448 # Func_class: F Nucleotide transport and metabolism # Function: Formyltetrahydrofolate synthetase # Organism: Clostridium acetobutylicum # 7 569 1 556 556 538 47.0 1e-152 MIGAMTMKSDLEIAREAHLDPIEKVAARAGIDEKYLEPYGRGVAKVDLDVVTHNRDHSCG KYVVVTAMTPTPLGEGKTTTAVGLAQGLEKIGKHSVLALRQPSMGPTFGIKGGAAGAGYS QVLPMEKLNLHLTGDFHAIGAAHNLLAAMIDNHLHQGNELDIEPHSISWRRVVDINDRAL RNTIVGLGSRVDGVPRETGFDITAASEVGVILSLATSLSDLRARLGRIVIGYNRSKEPVS AEDLHAAGSMAVILKDALKPNLLQTTENSPVLVHAGPFGNIATGNSSVIADRVGIGCGDY LLTEAGFGADMGAERFFNIKCRIGGMRPDAAVLVATVRALKTHAGRYKVIPGKPLPPAML EDNPDDVLAGAANLRKHIEIVREFGVSPIVALNVFPTDHPDEIDAVRKVAEAAGAHFASS THVVDGGDGAVDLAHAVVAACDHKADFRYTYDLEDSLVEKLTKVATKVYGADGIDIAPAA AKELAHFEDLGYGTFPVVIAKTHLSLSHDPSLKGAPTGWRLPVREVRAAVGAGYIYAICG DMRTMPGLGRHPAAERIDIDDNGETIGLF >gi|302034494|gb|GL383257.1| GENE 148 143099 - 143512 339 137 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3050 NR:ns ## KEGG: HMPREF0675_3050 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 137 1 137 137 263 100.0 2e-69 MPYPQLVTSKRAEDARLRIEFEERARRQEAVQAQRLIDDFLVMARAQGMTPVPLRAQLMD GHEARTDKRGWYLNAKHSLAIGENGEYYHLVVTGGFAERLRGVKLHPSLPPMHIGRGGRD GETGELKEFLTWLIDSR >gi|302034494|gb|GL383257.1| GENE 149 143509 - 144030 426 173 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3051 NR:ns ## KEGG: HMPREF0675_3051 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 173 4 176 176 338 100.0 6e-92 MLFAVTKFKRVMALLGVIYLVTVGGLYFVLADRSDNFIHDGQIIQGTVTAVYSHRSVSTG ATKYLMHAEGGNVALISYTYDGATDTVWSNPYRDIKKYHVGQKVDLVIRATPNHPDDAIV TVRDHTILGLRLIPWGFLASAVIMTAWFGRDYLRSKRRRRLGGQRHAPAAVEA >gi|302034494|gb|GL383257.1| GENE 150 144055 - 144729 356 224 aa, chain - ## HITS:1 COG:no KEGG:PPA0052 NR:ns ## KEGG: PPA0052 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 224 1 224 224 383 99.0 1e-105 MTFTSTTPRRLRSLWQELCSHPRAPWRTDLICRGCYPEDLPQRLRQDDAAALRALIAARS GAGQTSEFAGMALIQAILPTLVTIANRDHQACLDDYIGEAWVVIVTFPLSRTNKVCTNVA LDCLHAISSRRQHSSPETPAESIDISAPEMQEPGQVASDLLSAAEELGIITPTSAPVLRS VWVEALDCTTAAQRHNTSPTAVRARCSRASRAMRQHRDELLAAS >gi|302034494|gb|GL383257.1| GENE 151 144927 - 147398 1859 823 aa, chain - ## HITS:1 COG:Cgl2500 KEGG:ns NR:ns ## COG: Cgl2500 COG0577 # Protein_GI_number: 19553750 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Corynebacterium glutamicum # 5 822 11 853 853 200 24.0 8e-51 MFTEALRELRHHPGRLVATLIAIAVSVGFLVGISMFVRTQGVALGKEQAVATSKADVVVD TGGAVADPDEVTRTIKETQGVAAVDTVLSTSMPAAHGHDSVMIDLHQVPAEPFRWSTVKD GSWPSKADEVALSEDAAKRLQASIGDTVAFSGHDLKVVGITDDPSALQTAPAYVGQLPGQ TPDTWVVKAKDGTAPGQLVTNLEKTLPKIKDAPQFNKDDAGATISTADSFQKKTINSLTE DFDVTKYMLMVFGAIALLVGAIIITTTFLILLAQRRRQIGLMRAVGASSGQVRRRVLAEA IVLGVLGSMLGVVLGILLTVAGTAYTGALAFGLAWPWGDIIVEFLIGIVITVLAAFLPAL RATRVAPLEALRPVPTVEQKRRIGIARIVVCSLLAVAGIALSVGAIVGTGTSIITMAILS AMCLSLTLLIATPLYVPWLIRAMGFLLRPLGPTARLSTSNANRNPTRTSLTAVALMLAIG LSVTLQVGISTTRTTVMDQINEHFPIDLTLTNRPSYDPNTGQETASTLDTSALKTVQDLP NVKDSIVLKGGFAESDLSPHAHMLSGNPDEIAKVAPSIAKEMKPGVALITSIDNPPQTMT FTSSKGKVTLKVTKVHGLSEGDVVVNQEDLKRIVPSVTDQSIWVHLDDRSNLASTLTVMM SMSSSSSQHMDIGGGALIGGIVELILKVLLMVMTALLGVAVLIALIGVANTLSLSVLERR RESALLRAMGMQRRGLRLMLLYESIQVGMAGVIVGIVAGFYFAWLGIRSVFRVASDTIPV HFSIDWPWTLSLIAICLVAACLASVLPGRRAAKAIPTEALANE >gi|302034494|gb|GL383257.1| GENE 152 147398 - 148432 262 344 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 120 325 12 219 245 105 32 2e-21 MKGIMSDHDRPYESDEPQHSLDHAIPSEPGSFEPPRYGTSSEWSGDSLRPIGEQDRELGQ PWGLQAPAPQPPHTAKPFPAHPFNTATPAQRGGLAPGLLNTPIETDAAAGMQLTKIFGEG ETRVTALNSISVRFTRGTFTAIMGPSGSGKSTLMHCLAGLDRITSGQVFLAGMEISNLPD AKLTTLRRDNVGFIFQSFNLLPMLTAEENILLPLDLAGRKPDRALWDQLITGLGISDRLK HRPSELSGGQQQRVACARAMITKPHVVFADEPTGALDSKSGANLLGYLRHCVDDLGQTII MVTHDAKAASYADRTLMLLDGRIVDDIASPTAESVSEAMAGLEG >gi|302034494|gb|GL383257.1| GENE 153 148540 - 149196 608 218 aa, chain - ## HITS:1 COG:all4635 KEGG:ns NR:ns ## COG: all4635 COG2197 # Protein_GI_number: 17232127 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Nostoc sp. PCC 7120 # 5 213 2 209 219 179 50.0 3e-45 MPDPIRVILVDDQSLVRSGFRMLIESEDDMEVVSEASNGLEALDVLRRMPVDVALMDIRM PQMDGVEATRRITASPLDTKVLILTTFDLDEYVYAALKAGASGFLLKDARPTELLSAIRN VADGDAVVAPSATRRLLDHVVPTLPNDPKAADKRLSVLTDREKEVLVEIAKGATNAEIAQ TLYMAEGTVKTHIGRLLSKLECRDRVGLVLFAHEVGLL >gi|302034494|gb|GL383257.1| GENE 154 149215 - 149763 287 182 aa, chain - ## HITS:1 COG:no KEGG:PPA0056 NR:ns ## KEGG: PPA0056 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 182 22 203 203 349 100.0 4e-95 MCGVTLDDRDMKYYYAVLTHGITRKLDILLLTVAVALGFFGLDAWVILPESHTPLVKSLG IPAASWLVALILGLILRPFPTKLTGKVDANAMEAAIAKKTIMAFCGMTWPALILFVLAFL LYLPRSFVLLAMIAHGATLFLLLHSTDQRLEQFAETWCGDHYDPANPEIDTFLHGTRSVS FD >gi|302034494|gb|GL383257.1| GENE 155 149899 - 150729 626 276 aa, chain - ## HITS:1 COG:BH1926 KEGG:ns NR:ns ## COG: BH1926 COG0395 # Protein_GI_number: 15614489 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Bacillus halodurans # 4 276 13 285 285 254 46.0 2e-67 MRRRVHIGAFFRHLFLILGGLISLFPFYWMFVLASRPSSVIYKYPPVLTPGNRLGENVHT ITDKVNIWAAMANTALVATTVSVLVLLISSLAAFAFAKFDFPGRNVLFVIVLATFLLPTQ LATIPQFVLMSKIGWVGDLKAVIVPSLASSFGVFWLRQYATNAIPKELLEAATLDGCGFW HQYVHVCLPIIRPAMAFLGIFTFIGSWNDFMWPLIVLNDPSKLTLQVALSQLKTAHGTDY GMLMASSLIAVVPLLVVFVIGAKQLIAGISEGAVKS >gi|302034494|gb|GL383257.1| GENE 156 150726 - 151691 782 321 aa, chain - ## HITS:1 COG:BH1925 KEGG:ns NR:ns ## COG: BH1925 COG1175 # Protein_GI_number: 15614488 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Bacillus halodurans # 25 317 15 300 305 197 39.0 2e-50 MSSPHTVTATPTDELHHPSVGRRMRKALPIYAALSPYFFFFLVFAAIPMIFTLLLAFTDW SGLGSGHFVGLENFTYLISDHLFYKSLGNTLILWAMGTIPTLIIATIVALMLNKTMRFST TYRVIYLVPNITSMVAMGILFSSIFSSQFGLANAVRNLLGQENIAWLQNEWGIKIAISSL TVWSFVGYNALLILAGLQAIDKTQYEAAAIDGANGWQTFFHVTLPQLRAIVLFITLMSTI GSLQSFTEAQVLTSSQSAGAASAGGVNNSGLTMVLYFYSVAFQENRYGYGATIAWGVFVV VLFFSIINWLVTREHDRKVAR >gi|302034494|gb|GL383257.1| GENE 157 151707 - 153011 1224 434 aa, chain - ## HITS:1 COG:BH1924 KEGG:ns NR:ns ## COG: BH1924 COG1653 # Protein_GI_number: 15614487 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Bacillus halodurans # 3 425 1 422 426 179 27.0 7e-45 MNLSRRHLLSGGFAGLGVLGVSALTGCSTSTEPKSDTGAGDAKKLVLWMWPEGFDKQTLA TVAKAQPSYNVRQDIIGGDFKQKLTTTFTAGSGLPDLTGVKGEDIAFFRDHAGYFVDLNT LGAKDIESDYLGWKWAQATTTDGKQLGIPSDIGPTALFYRADIFEQAKLPSDPDQVAAQM TTWDAFIEFGTKLLAAKKKTYLVRNAAGLFGTIWPQSGKGFIDEKKTFIGDQDHIRNAWD ITVKALKAGIIATIQSDTSDAAAAVNEGRLPADFGASWHLADLMVDAPQTKGKWRVCAHP GPAINQGGSFLSIPAGASDPKASFAAIRELLSVKSQIREYVHNGNFPVSPKAYDDPKVSG PVDFLGGQHAAKVFGKAAESVRPLFEDSNSGAVSAPFAAQLERVESSGKNPETAWHDAVS EAKRIARQLHLTVR >gi|302034494|gb|GL383257.1| GENE 158 153343 - 153582 136 79 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVHDVAEVVVHARNELDTSPGTLDDALIFQGDAIASGRGHTHVQIPSDVDGSHGRPVPEQ FDDRVVTSGLEHVPHGTDP >gi|302034494|gb|GL383257.1| GENE 159 153463 - 154116 558 217 aa, chain + ## HITS:1 COG:HI0615 KEGG:ns NR:ns ## COG: HI0615 COG1349 # Protein_GI_number: 16272557 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Haemophilus influenzae # 3 209 33 241 249 99 29.0 6e-21 MATARRDCIALENKGIIERSWGGIQLVTSVDDHFGDVMNHHTQAKAAIARKATELIHDGD TIIMDIGTTVHHLSGLLTGRSITVLTASLPVFETLRTAPDVTVVVLGGVWSERYQCSDGQ FVADALTRHQADLAFLGCSGVSANGRVRDTSRSQAYIKQAIIAAASRSYLLVDSEKFPGV GAHSPFTLEEVSGVITTGPLPPDFDAHCESTVEVITA >gi|302034494|gb|GL383257.1| GENE 160 154113 - 155501 1204 462 aa, chain + ## HITS:1 COG:YPO0166 KEGG:ns NR:ns ## COG: YPO0166 COG1486 # Protein_GI_number: 16120509 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases # Organism: Yersinia pestis # 2 446 5 422 437 201 33.0 3e-51 MKLTILGGGGFRVPLVFKALAHDTSPQRVTELRLYDTDPLRLGVIETVVAQLARALPHAP SVVATTDLPTALAGTDFIFSAIRVAGTHGRALDESMCLARGVIGQETVGAGGISYALRGI PVVLDLVEQITRYAPDAKVINFTNPAGVMTEVMQRRLGDQVVGICDSPVGLARRILTTLQ RAGLAPADLGSLFDGDGRIHIGYSGLNHLGWLTSLNVDGVDVLPRLLERPDLIESFEEGR LFGADLVQALGAVPNEYLHYYYYPRDDLAADRKAEAPRGAFLEAQQNQFYTQAQHTDDVA GLWEATRLEREETYMATNREVSGEFERDEADLETGGYDKVALAIMHAIANDVPAELILNV ANHGALPDLPDEAVVEVPCRVDGAGIHRLPTPALPDHARGLVVNAKYVEQRTIDAAVNHS RTAALLALSHHPLVDSVHVAEQLLDDFADAFDGLEYLKDAHA >gi|302034494|gb|GL383257.1| GENE 161 155494 - 158622 1734 1042 aa, chain + ## HITS:1 COG:lin2123 KEGG:ns NR:ns ## COG: lin2123 COG0383 # Protein_GI_number: 16801189 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-mannosidase # Organism: Listeria innocua # 58 1039 55 1029 1032 455 31.0 1e-127 MHDHTELIQDRIGHLKERLEREITEKICPLQVTAWQVPGEPVSFKEAAAANYQPFPPGTW WGAPWSTWWLHVTGTLPASHAGEEVDLSMDLGFVGDWAGNQSEAMVYTANGRPLKALNPR NHRIGLNHGALAARFTKEGEPLIGADGDVELWVEAAGNPDMTQHLGGPTELGDRRTAGHE PLWQFKGAELSVRRNEVWGLWLDIDVLDGLMRQLPAESTHRARLLRGLEQAADEVDHQGI VAGAGPARQILAGYLDSGANSSAQQMTAIGHAHIDSAWLWPLRETRRKVVRTFSNVVALA QEYPDFHFACTSAQHYAWLQESSPELFERVQEAIERGQWHPVGGMWVESDANLPSGESLV RQFTSGLRWMREHLGVRPDCLWLPDSFGYTGALPQIARLAGMRWFFTQKLSWNTANTLPH HTFWWEGIDGTRIWTHFPPVDCYDCVVSAQEVKKAEANFKEKGVARRSILPFGYGDGGGG PTAEQVERARRFADLEDAPQVRLGSPDDYFDQAQEDHPQASVWRGEMYLEFHRGVYTSAH PLKNGNRRAEVGLAAAEWLAVMAARTGHPYPYQQLEQLWQRTLLLQFHDILPGSSIAWVN QEAIAEFTAIRAELNQLMDDAWQALLQASGGETVGVSLVNPSQADRREVLTVSDRPVLVQ VPAMAAKSLTDAVVDPEHPVHVQRGRDAIRMTNGLVDVCIDTRDGLVNSIVDLVSDRELL LSGQRANRLVLHPDYPDCFDAWELQQQYRHSGDPVDRVTDLRVTESLLRAQVRVERHADQ SSFVQTITLDADSRAVEFSVDVDWAERARVLKVDFPLDVAARSSRDEIQFGHIGRPIEAN TSWDDAHFESCGQQWMLLAEPRYAVALVNQSSYGHDVSPAGGDEHTPTMGVMARLTLLRS PQSPDPHPDQGCHHLVYSLLTDARVESAHVEAARLNQPLQVRSGTVELPSTARIEPVHGT AVIDAVKQAFDGSGDLVIRIHEAEGARSRVRLLLDRDGCVSEVDLLEDPIDEPTQQLPAS TCSRVELTLRPFQILTLRVSQR >gi|302034494|gb|GL383257.1| GENE 162 158924 - 159712 574 262 aa, chain + ## HITS:1 COG:Cgl2398 KEGG:ns NR:ns ## COG: Cgl2398 COG1524 # Protein_GI_number: 19553648 # Func_class: R General function prediction only # Function: Uncharacterized proteins of the AP superfamily # Organism: Corynebacterium glutamicum # 79 228 1 148 155 87 36.0 2e-17 MWMTPPTDSAPGWTTILTGATHEQCNVWWNEFVGHDLARHPDILSQVFFANPSARTLAAA TWDAFVSPYGPGPIIHQRVDQQRTGQHQLFGPDLSQGIDRADEQVSSWAAWHLLHEGPDA AVVYFEGVDHAGHSFGADSEQYQQAVGHVDELTRHLVKAVAERHEQLGEQWLVAVTTDHG HKPEGGHGEDEVEVRRSFLAAHHIGGTLPEPLLRTAALRSHEVTPLLLQAMGVHPGHMDA SDVGVLRDVEPIGPSREMDFEW >gi|302034494|gb|GL383257.1| GENE 163 159706 - 160350 453 214 aa, chain + ## HITS:1 COG:yqaB KEGG:ns NR:ns ## COG: yqaB COG0637 # Protein_GI_number: 16130602 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Escherichia coli K12 # 12 181 7 179 188 86 33.0 4e-17 MVTMYPPQQVDAVLFDMDGTLLNTLSAWCVASEHLWGTSLADADSAKVDGGTVDDVVELY LRDHPQADPQATVERFMDILDANLAGNTEPMPGADRLVKRLSGHVPIAVVSNSPTRLVRD GLASQGWLELFDTVLGVDEVAAGKPAPDPYLTAARRLGADPSRCVVIEDSAFGLRAGRAA GAWVLTVGRRLKGQGDMWVSGLDDERVTSWEPHR >gi|302034494|gb|GL383257.1| GENE 164 160347 - 161642 697 431 aa, chain + ## HITS:1 COG:lin0759 KEGG:ns NR:ns ## COG: lin0759 COG3538 # Protein_GI_number: 16799833 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 31 423 19 423 432 366 45.0 1e-101 MRACELTPALRQRLDEIGAKISQGVGKGLDEAMGRQAASRFVAWMTDTWTRTMSRDEHGV FVVTGDIPAMWLRDSSAQLWPFLIMCDLPEVTRQIGDVIARQWHCIDVDPYANAFNSGPT GAHFDADDLDVADELWERKYEVDSLAFPVDLAWRYWQATGSPEHLNGAVHQGCIRIIDVW SLEQDHARSTYRHVRPAEPSDTLGRDGSGTPVGHTGMTWSGFRPSDDACRYGYNIPAQFM AMRALRQIREFCRVWDDEDLVERATKLADEIDAGVRQFGIVEDHLAYEVDGLGSVLEMDD ANMPSLLSLPLTSDLGRDDPLYQSTRRWVLSAANPYLFSGPAARGIGSPHSPKGYIWHIG LAVQGLTGDDAEARDCLETILATDGGTGWTHESFDPTDPTRFTRGWFSWSNSMACLLMMN VAGIDAIIGAN >gi|302034494|gb|GL383257.1| GENE 165 161626 - 163164 839 512 aa, chain - ## HITS:1 COG:CC0447 KEGG:ns NR:ns ## COG: CC0447 COG3525 # Protein_GI_number: 16124702 # Func_class: G Carbohydrate transport and metabolism # Function: N-acetyl-beta-hexosaminidase # Organism: Caulobacter vibrioides # 66 508 90 519 757 247 33.0 3e-65 MPTNDTLIRGLCPQPRQVQLTEGQFPLPSVLTWTGPDEVINAVTILTERLAPALDVVRAT SHTDDASLTVIVDPALEAEGYRIDIDAQVRITVGSPSGARWAVQTLLQLLTPWVYGPGPL ALKHLCLPKGVIVDAPHHSWRGAHLDVSRHFMPTSFIMNFLDVLAVHKLNRLHLHLTDDQ GWRLPVPGWPRLTTVGAWRPGTVRGHQPPPDDNGCDDVAEHDHIPHGGAYTVDQLRAIDE RAQLLGITVVPEVDLPGHTESVVAAYPELGCGAPISHPRTAFGVSEHHINLTDAALGFCR DVLDAVMEIFPNSPIHIGGDECPGKEWFGHKPTRTRLAELGITTPHQAQAWFERQICGHV VAAGRQVIAWDEVLEAGAPEEVTVMVWRDADDIARAAAAGHDVIAAPARHTYLDHGMETG PQAPVTIDAPMTMNDVAGLHDVLAAVNSPHLLGGQFQLWTEYLCTPAQVEDAAFPRGTSI AEQLWTGNPARPLSELEAQTRRLTAMGVNWHR >gi|302034494|gb|GL383257.1| GENE 166 163270 - 164205 554 311 aa, chain + ## HITS:1 COG:AGl468 KEGG:ns NR:ns ## COG: AGl468 COG0524 # Protein_GI_number: 15890341 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 256 23 285 319 73 29.0 5e-13 MSVNRHPRLLTAGITFRDLVISGIDELPGLGEERYGTDFVTTWGGVANTARIGASLGARV QLLTGLGDDPNSEMCRRELTEWGIDLTPSPINPGWTLPVTMSQACGTERAMTTVETALPA PLPAPNLDGVDVIVTHVSVPADAWLHDAADAGIPVIADHGFEEGYEPGLLDAVSGCTCYT PNAAEAMHLTGVDDPVRAARALAERVPVVVVTCGGDGIVGVDSRTGEEVHVPAVNINPVN TTGAGDAALAGLAWCWGWQVPLARKLDVAALVGAIVTSRVHGTAGPLTPEDVLAWVPRAP ERLGFLPELLG >gi|302034494|gb|GL383257.1| GENE 167 164224 - 165594 1048 456 aa, chain - ## HITS:1 COG:BS_yfiJ KEGG:ns NR:ns ## COG: BS_yfiJ COG4585 # Protein_GI_number: 16077896 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Bacillus subtilis # 111 447 48 381 400 105 27.0 2e-22 MEDTGSQTLPTENRSTGSRGAGVRARLNRFNPSRNNVPQINIPGMEEVLDPKLDDGRPAD TERAWWGDVTLTLIMAVVTIAPYLVSLVEWPRPEYIAALLSSMVMVASLPMRREHPLLMM TLVAIGAAIQFFFVPFPVLSIFVVPIASYSVARWVDGHQSRWVLWVGAVGSVIGPMRWIP TIAAGYDPSSGTPWVLLVLAMTVCAGLVLTPYAVGRRLRESALIDSQQRIVKAQRYRAIL AEREQQARVAEERTRNEIARELHDIVAHSLSVMIVQAEGGKALATKKPEKAPEVLETIAE TGREALLEMRRIVGVLRQDTDAEFSPSPSLAEIPDLVDKSGVKVELKVTGEEPVVSQALG LVIYRVVQEALTNVLKHAGPSAHATVTLAYSPTAIYVEILDDGYGAAVQGDGRGHGLQGM RERVTSMGGQLSAGPRKEGGFRVMAKLPVQADSRQR >gi|302034494|gb|GL383257.1| GENE 168 165774 - 166763 971 329 aa, chain + ## HITS:1 COG:BS_galE KEGG:ns NR:ns ## COG: BS_galE COG1087 # Protein_GI_number: 16080937 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose 4-epimerase # Organism: Bacillus subtilis # 1 319 1 327 339 241 42.0 2e-63 MKILITGGAGYIGSTVGSACEEAGHEVVVLDDLSAGRREFVRDRTFYEGDIADQDLLDRV FSENQIDAVVHCAAKIIVPESVDEPLTYYGNNVGKTVALLKGMERNGVHRILFSSSASIY ATDEESKVTEESALDPGSPYATTKFMVEFILRDAAHASDLKALSLRYFNPIGSDPKLRTG QQIEHPTHVLGKMIDAWMEGSTFTVTGVDWPTRDGSGIRDYIHVWDLARAHVAALEHLDE VTTDDPYQVFNIGTGSGVTVKELVKAFEEGTGKSLNVVYGPPRPGDVAGAYTVSRRAKDL LGWSAELTQADGIRDAIAWLPERKKILGY >gi|302034494|gb|GL383257.1| GENE 169 166836 - 167468 566 210 aa, chain - ## HITS:1 COG:no KEGG:PPA0070 NR:ns ## KEGG: PPA0070 # Name: not_defined # Def: transcriptional regulator # Organism: P.acnes # Pathway: not_defined # 1 210 62 271 271 389 100.0 1e-107 MTTTSDTPPISARRAATQARLADAAVAVFARKGVPGSTVEEICEEAGFTRGAFYSNFTSK DDLCTTVLRRYAEKNLATLGSSLDFPNDGHEALRDRIHGIIALFASTVGSDPLTAMAILE ITIEAARNPRLRQAYRQVGDAITPALCHMVEQALREHAATATIAVSDLVEVTQAVFDFRV LAAMASGRQADIDRMTNQLTMMVLTFVHPM >gi|302034494|gb|GL383257.1| GENE 170 167588 - 170317 2036 909 aa, chain + ## HITS:1 COG:BS_ydfJ KEGG:ns NR:ns ## COG: BS_ydfJ COG2409 # Protein_GI_number: 16077610 # Func_class: R General function prediction only # Function: Predicted drug exporters of the RND superfamily # Organism: Bacillus subtilis # 1 740 1 718 724 462 38.0 1e-129 MSSLLHDLGVWCFRRAKTVVALWLVLLALLGVGVAALHGDYDDFFTIPGAPSQVAYDKLQ VAFPQASALSANVVVTVPDGTNISSKLIRSRIEKGVDELKDLPLVTGATSPWNKYVTGMV NKDHTAAVIQVELGQNNAVTFPDSGRHDLIRVGNEIQSDLPSGSHVYVGGQAFEATLPSL SITEVIGVGVALVVLSVTLGSLVAAGMPIVTAVLGVGVTYSGMAILTRFTTVNSVTPMLA VMLGLAVGIDYALFILSRHRDQLRDGAEVQESAARAVATSGSAVVFAGATVVIALIGLSI ARIPFLTVMGIFAAIGVALAVVIALTMLPAFMGLMGERLRPRRSRADTKARTAGEKERSG GIFGWWVRTVTRVPLVTILVVVVGLGALAVPMKDLHLSLPTAAELPASNTARQTYDVLEQ KFGPGFNGPVIVTADVVSSHDPMRIVNGLKADIEKIPGVDTVALAVPNRNADSAMIQVLP TTGPADEATNNLVRTLRDHETQWRDTYGVDTAVTGLTAIKLDVSQRLGAALLPFGIFVVG LCLVLLTLVFRSIAVPIKATVGYLLSVLAAFGVSQLVFNRGIGLQVVNLDRLVPIISFMP IVVMGILFGLAMDYEVFLVSRMREEYVHTGDAKGAVTRGFIGSGKVVTAAAVIMISVFVF FIPEGMNAIKEIALALAVGILTDAFLVRMTLVPAVMALLGDKAWWLPGWLDRRLPRLDIE GEGIAHEEKLAAWPTADHTEALHAEGIGVEGLFEGLDLHVEPRQVQAVVGSQNSVSAVLL AIGGRLPLDHGRMRSGGLLLPERASRVRRVTWFLDASAPDFVDELRSAMTVLTHLPRRPS KRPRLFLIDHADRIVDPITRDLLESLVREAGEAAVILGAQRRGRIDWLSPQIIHNLAEHH FESSSGGTR >gi|302034494|gb|GL383257.1| GENE 171 170317 - 172683 1512 788 aa, chain + ## HITS:1 COG:lin2460 KEGG:ns NR:ns ## COG: lin2460 COG1511 # Protein_GI_number: 16801522 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 15 573 20 612 927 153 27.0 2e-36 MTERSHSTIRLRWPAVVVLVLVPLLVVAGLVGTTWHTTDRLGRVKAAVVNEDKAVKVRGQ LVPMGRQLTAALMDSGSHTTDGHTVDWTLTDAQGAAEGLRDGTYSVVVTIPESFSADATS FSANDVNKAKQALIDVTASQNSPVTDTTIAELTAQVARRSLNTTLTSKYLENVYVGFNRF AEQMARMAGAAAKLDDGATKLADGTKRSSAGAATLASGMTKLSGGAQRLSANGGKLTDGV SQLSGGLTTLSHKGQQLSQGADGLASGVATYTDGTGKVVDGIGQLSAGLTTMDEKIAAAT GKIDPSQLDKLAGGAGQLADGIDQFTGNLVGYRTEIRQYASGKKTAELSKEALSRGEADF LRRCMRSHTAQECHDLVPIVRDAMTDGYALGVRAGSGVAVKAMAIKDPNSGKSIDDGIDE LADGSSRLSRGVNEFTTQLRTCLPKMVRQVTRLHEGIHQAATGAQALASRSQQLKAGGVK LSSGAATLAHGVDAYTAGVSKAAGSTPKLQNGVNQYVDGVDRLSDGLAKAATGAGTFASG MTKLDSGARKLTKGTGVFSSQLAAGAKKVPTYSQNDRTKLADVVSAPVNGDGPAIATSVA VVAVLLVLGAWIAALATWLVARTVPSGALTSSRSTLGLLARTMSVGAVVSVAVSGGLAVI GGTALGLSVPRSIGLGSLLLLVGVMFGLVNHSLAAWLHGLGRLISVVLVTATVAAGLAST VPAPVRWADAVSPLNPALRAVQAVVAGQNPAFGSLVAVVAWAVVALVASMGAVGRRRQTS AKALLGSG >gi|302034494|gb|GL383257.1| GENE 172 172869 - 174314 950 481 aa, chain - ## HITS:1 COG:no KEGG:PPA0073 NR:ns ## KEGG: PPA0073 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 481 1 481 481 754 99.0 0 MTMTPPIEPGTADQRIPSLPVPEPLGATPGRLTTAAILSMTLRASAADHSTWRLPVVAFA VIATIILDVTGGAVMMWHLPGDNSGFYKLTSTIAVILLVLPLMTLAASAARLSARRRDDR LSSLRLVGASSHLLRVVALTEAGLQALVGSILGITGYVLCLPLLGQLSFNGGKVGADSIL LRPIPVAGVILTLVLLALVSSAIGLRTVDVSPLGVRMRSQPRSVSWVRLAIGGAIVLLIV FSKAVLGFLGHQTGMVGVYVFIAVILAAVVELANIIGPKLLAMYFQHRLQRAKDATDLVA ARQVLENPRAAWTQVASLGAVCVVGMLGGTGAAMMQTINNDPPATKSARIVGGDLQTGVI LLIIFAFATVACSVGVNQASAILDRRSVEVGLDVVGMDLQTQDKVRRITVISPMRFAMVT GIIATGLLLVPATGIALITRPATVLVTVATIVAGAGMVRLGLWATRPTLRRVIDDGLART E >gi|302034494|gb|GL383257.1| GENE 173 174317 - 175069 271 250 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 28 239 9 218 245 108 33 2e-22 MLTTTRPHPRAADTTIRGAHLRALGLTKTYGMTRALDHIDIAIPAGQSVAVMGPSGSGKT TLLHCLSGILSPDSGSIELALPDRTVNVENLSNEGRAKLRRQSLGFVFQQGMLVPELTAV ENTALPLMLNGVSRTDAVRYATQWLESMGLGGMEDRRIGQLSGGQAQRVAIARSQVIDPS IVFADEPTGALDSATAIEVMAILLSATTGRGRTLVVVTHDEDAPRRCQRILHLHDGRIVS DDVRHSDGRW >gi|302034494|gb|GL383257.1| GENE 174 175023 - 175229 99 68 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|314926496|gb|EFS90327.1| ## NR: gi|314926496|gb|EFS90327.1| hypothetical protein HMPREF9606_00755 [Propionibacterium acnes HL036PA3] hypothetical protein HMPREF9614_00718 [Propionibacterium acnes HL002PA2] # 1 68 1 68 68 110 100.0 2e-23 MVVSAARGCGRVVVNMASTVLLEPLVTHRAGERISWSFCGMSVFAAGYAQTRSGPGSRAQ RVLCQSCS >gi|302034494|gb|GL383257.1| GENE 175 175284 - 176153 295 289 aa, chain + ## HITS:1 COG:MA1360 KEGG:ns NR:ns ## COG: MA1360 COG0500 # Protein_GI_number: 20090221 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Methanosarcina acetivorans str.C2A # 48 191 36 176 281 75 34.0 9e-14 MGAGGYIGHRGRYRLRGQAMQGGGMEIIDYFGLWEHDRSCDPQRRTLEEEREFWRCYARV YDQHAGETGGSLAQIAAVTEIVEPGSSVLDVGGGTGRFAIPLAQRGCRVTVLDRSEDMLS VLESSAEEKDVEIDVVHQEWPADLGCQFDSVMAAWSLYWNLDLQASLQAMVRQTKKHLII IDTTGSPTVWDHALAVARGGGIVASQARHLLFAGGLAQLGIPAEIRVLEEYRVIGETELE REIDAHGGSKVAAMEYLDTHAVRIRSGWRYKRTVGLIHAQGKNIPARNL >gi|302034494|gb|GL383257.1| GENE 176 176374 - 177402 689 342 aa, chain + ## HITS:1 COG:FN0885 KEGG:ns NR:ns ## COG: FN0885 COG0614 # Protein_GI_number: 19704220 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Fusobacterium nucleatum # 68 330 20 276 286 161 37.0 2e-39 MVRKRVRMTALIAAMAMPIFSLVGCGSAVTDPSISKASTATLPVMQGHTSYPLTVTSCGV SQVFESAPKRAVTLTSTATETMLELGLEKRMVGTAYQRNRPIGSQYKKAYDSIPILASGQ PSMEKLLSVNPDFVYSGYPDGFSKSNGHTREDLKKLGIKTHLSPVGCSDQVKTLEDETKE IRTIGQIFDVNDKAEKAVRRFNSKVSSVKNSVKGKDRPKVFLYNSGIEAPITVGGWAYAS VMIDAAGGENIFAHEPLRWGKMSWEQVAKADPDMILIYDYKTPSVDQKIKTLKSIPALKD TKAVKNNAFPVISLSLAQPGPRSAESIEQLLNSSIADARCAQ >gi|302034494|gb|GL383257.1| GENE 177 177383 - 178552 475 389 aa, chain + ## HITS:1 COG:FN0884 KEGG:ns NR:ns ## COG: FN0884 COG0609 # Protein_GI_number: 19704219 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Fusobacterium nucleatum # 67 385 26 341 345 213 38.0 4e-55 MLGAHSEGDDTSVRSVSDQGDLVAILNRVPARSLEDVTSYQSDLRRGRSVVLILVFVTVL LFVLGTALSIGSVQVPFTMVWKVVAHRVFPEGVISVEWTPAIDRIVADTRLPRVLLAAVA GMALTTVGTVVQALLRNPLANPTILGVSSGAATGAIAVMRFGLLIGGTVSLGLAAFGGAF LTLLLVIMVARQRQTMTAGTLILTGTAVSALLSAVNNFMVLTSPDPQLASQVLFWSLGGF GAAKWENLLFPSGVLAIGIILCLAQASNLNILLAGEESAGSLGLNVNRFRTWMFAVAAAI VGVTVAVCGVVGFIGLVMPHITRLCVGADHRRTLPIGLLLGAIFTVLADLGARMVIRPQE LPVGIVTALVGAPFFLFLLRRNGGRRKDD >gi|302034494|gb|GL383257.1| GENE 178 178545 - 179312 179 255 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225088774|ref|YP_002660041.1| ribosomal protein S16 [gamma proteobacterium NOR5-3] # 7 218 12 222 312 73 28 9e-12 MIKGAKLVVDNLGVDIDGHCIVDGVNFCARPGDVVGILGPNGSDKSTILRSIFHSRKPAR GSVTLDGVDVWSRDAKWSAQHICVVLQETPAEFPLTCGEIVRMGRAPHKRSWQSLGAGDL ELCHAAMEVMEVDNLAGSSFSRISGGERQRVTIARALAQQTGMIVMDEPTNHLDIHHQLK LMHLLRRLNATTVIALHDINLAGRFCDTLVLMSGGSCVACGAPSTVLSPNVLDDVYHVKT DVVRQPNGTVHVTIL >gi|302034494|gb|GL383257.1| GENE 179 178827 - 179075 67 82 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MMDVEMISRLIHDDHAGLLSKRPRDRHSLSLTPRNPRKRRSCKIVDFHNLHRRVAQFEIT SSQRLPRPFVRSSPHPNNFTTG >gi|302034494|gb|GL383257.1| GENE 180 179395 - 180852 1468 485 aa, chain + ## HITS:1 COG:Cgl0050 KEGG:ns NR:ns ## COG: Cgl0050 COG1012 # Protein_GI_number: 19551300 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Corynebacterium glutamicum # 1 483 1 484 490 537 60.0 1e-152 MMTNDRSLPSDLPTQLLIDGEWVDAEASRTFDVINPATEKPLVAIADASVDQGTDALDAA VRAQHSWADTAPRERAEILRKTFNLVTERKDDFARLMTLEMGKPLAESYGEVTYGSEFLR WFSEEAVRIRGDYGLLPEGNIRQLVTKRPVGPCLFITPWNFPLAMATRKIAPALAAGCTV VIRPASATPLTTLLLAKTFLEAGLPAGVLNVITGLDHAVTDAILEDPRLRKLSFTGSTGV GANLLGKAAKHVLRTSMELGGNAPFIVFDDADLDQAIIGAKGAKMRNMGEVCIAANRFIV HESVAEEFTDKMIEMMSGLVVGDGLDEKSEVGPMITERDREKVDGLVRSAIEAGATLRCG GEIPEDKGWFYPPTVLSGVPADAEIMQTEIFGPVAPITTFRTEEEALALANSVPVGLAGY VFTSDTARILRMGQKLETGMIGANLGVFSNAAAPFGGVKESGLGREGSYQGIEEFLETIY VALPA >gi|302034494|gb|GL383257.1| GENE 181 180897 - 182183 876 428 aa, chain + ## HITS:1 COG:NMB0982 KEGG:ns NR:ns ## COG: NMB0982 COG0038 # Protein_GI_number: 15676874 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Neisseria meningitidis MC58 # 31 384 2 355 380 100 30.0 4e-21 MVTSRIRFVAAVVLTGLASGLIGGLTSELSHLIEVCAFGVPFSSSTTGVGEVVMWRRLVA PIMGALIAGLTWRWLRPFPSGSITSVRQAIDSPTRLRPVETIVDALAQLVVVGSGSSLGR EAAPRQMAALAAQGLSDTFRVDVATRRVVLASAAGAGLASVYNVPVAGALYALELTVRPD LRTKRGWGQVGIAGVISVLSTVTAWLLNHDRPIYRSPAATVTGPGLGWMVLVVAVSTVVG AGMGVLFGEMKRRVPVTSRLWWTVPLGSAGVTAIALAAPQVVGNGQVIVNLVLAHPVAPA SLVILLVGKILATTVALRSGAAGGLLTPSLSAGALVGALVAVVAGIDAPSQIAMMVIVGA GCVLSMTQRAPLFAAAFALELTRAGALGIPVVVAAVMLGWTGFVLVSRRGLGLHGRIGRA PGHTSDPR >gi|302034494|gb|GL383257.1| GENE 182 182238 - 184604 2684 788 aa, chain + ## HITS:1 COG:Cgl1277 KEGG:ns NR:ns ## COG: Cgl1277 COG0058 # Protein_GI_number: 19552527 # Func_class: G Carbohydrate transport and metabolism # Function: Glucan phosphorylase # Organism: Corynebacterium glutamicum # 6 787 9 792 795 1048 65.0 0 MTQDLASAIAFQVRSTSGRSVTASTPMEVWQGLSACVVGRIADDWQATDAAYKAERQEHY FSAEFLMGRALLNNLSNLGLVNETREALASFGIDLSEVLEQEPDAALGNGGLGRLAACFL DSCATLELPVTGYGILYRYGLFKQLFDNGFQTEHPDPWMEEGYPFVIRREEQQRIVRYAD MWVRAIPHDMPITGYGTRNVGTLRLWKAEPMEQFDYQAFNSQRFTDAIVERERTSDISRV LYPNDTTFEGKVLRVRQQYFFCSASLQEIVDNYIEHHGEDLTGFAKYNSIQLNDTHPVLS IPELMRILLDEHGMGWDEAWEVVTHTFAYTNHTVLAEALEKWEMQIFDRLFPRISEIVRE IDRRFREDMNKRGVDGQTIEYMAPVSGNQVRMAWIACYASYSINGVAALHTEIIKRETLK EWHAIWPQRFNNKTNGVTPRRWLNQCNPRLASLLSEVTGSDTWVKDLSVLANYTDSVDES VYDRINEIKHANKVDFAAWVAEREGVKIDPDAIFDVQIKRLHEYKRQLLNAFYVLDLYFR IKDDPSLNVPKRVFVFGAKAAPGYIRAKAIIKFINEVARLVNNDEDINGRIKVVFIHNYN VSPAEHIIPAADVSEQISMAGKEASGTSNMKFMMNGALTLGTLDGANVEILDAVGDDNAY IFGATEEQLPSLKRDYDPRWHYENVPGLKRVIDTLTDGTLDDNGSGWFHDLRQSLMEPGW EVPDVYYVLGDFASYRDVKDKMAADHADARGWARKAWVNVTKSGRFSSDRTIRDYAEQVW KLEPVRAE >gi|302034494|gb|GL383257.1| GENE 183 184669 - 185061 459 130 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3082 NR:ns ## KEGG: HMPREF0675_3082 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 130 1 130 130 195 100.0 6e-49 MAVTMRIVAALLVIAAVWGGKYVVSLIFRAAGVRAGGDTGLLRGGLWIGYLERLGIVIAI LTSYPAGIAVILGVKTLARYAELKSQPTPGSDAAQANKESSAAIEQFIIGTMASALWSVL LTVTAKALWG >gi|302034494|gb|GL383257.1| GENE 184 185046 - 185681 384 211 aa, chain - ## HITS:1 COG:no KEGG:PPA0082 NR:ns ## KEGG: PPA0082 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 211 1 211 211 382 100.0 1e-105 MLAWVILADQVDSRRHNDEVPHLLTALTSPGLLVSPTGYTVGTPQWVLPPERTSGDEVQA LTTDPASLIHAVWTSGSGPWRIGVSHGEVDTPLPDSTRAARGPAYISAREAIDECRRRRA AIHVFADGTDGMRRFSQVAQVVVDLARRLRPAARDVAKFYDLSMSSDETARALGISTSAV SQRLTRARWEYLVGIRQLAVDLAQEAQWPSP >gi|302034494|gb|GL383257.1| GENE 185 185616 - 185954 101 112 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGDLVVVASTVDLVGKNDPGEHGALLPVVLWSAVVGLENNLNCAPVKGRALCGCLGASVW WLSNGLALLLSDREDSKAKLSLGGFSLGCPGGEVRGRTTGALRLPCALRGPS >gi|302034494|gb|GL383257.1| GENE 186 185869 - 188085 1564 738 aa, chain - ## HITS:1 COG:no KEGG:PPA0083 NR:ns ## KEGG: PPA0083 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 738 1 738 738 1437 99.0 0 MSSSTSQTTSRAGRLTLPVEKGMDAQVAELLERLQADAVRNSDGTELPEIVNKLATKIYQ TYFVGRGDQDWAQTHPRELTRIYLMSERTPALADGELSIDLMTNWFVDQVYPDTDCDVER WWQVIDRTTGDVIAPGAWHVDPADLSVTMDQAQAGHVYTVGFLAVQRWDPTQMYNYLTNG WADDPQRIKESPYDIRYPQTWQHVRHALDQWLADNPQVDVVRFTTFFYHFTLVYGSDGTE RFVDWFGYSASVSVPAMEAFEKRFGYPLQAEDFIDEGWYNSPFRVPRKSFRDWVSFQHEF VTSRMAELVEQVHAAGREAMMFLGDNWIGTEPYGPHFAHTGIDAVVGSVGSGATCRMISN IPGVRYTEGRLLPYFFPDVFYPGGDPVTEANASWLAARRAIVRSPLDRIGYGGYLSLAVQ HPEFVDRMEEIVNEFRAIHAAAAGQRPIATGPRVAIVNCWGALRSWQTHMVAHALHYRQA YSYLGVLESLSGLPLQVDFLSFDDIRNGVPEGVEVLINVGAAGTAFSGGSEWADERVTSA VRRFVAAGGGLVGVGDPTAHPARGAVYQLSDVLGVDRELGWGLSTHRPMHTSDHHFVTLD LSSRLDVGEGTPDVFCASATTTVLAAHHEQVDLAVNQFGCGRAVYLAGLPYSSQNARLLH RALAWAGHREDAFTTWTSSDVRAEVAVYPHSDRLLVINNSLDQVTTTVSTPTTVREVHME AAGHLWFDLELHPLDIPG >gi|302034494|gb|GL383257.1| GENE 187 188215 - 189426 468 403 aa, chain - ## HITS:1 COG:BH2758 KEGG:ns NR:ns ## COG: BH2758 COG1940 # Protein_GI_number: 15615321 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Bacillus halodurans # 4 340 2 326 386 133 30.0 5e-31 MHSAVVGAERIDHGTMRTINLALLLGALRSGPISRAELSRRTHLSKASITSLAAELAARG LVREGSPDRNGTVGRPGTMLTLEGARVCGVGLEINAEYLAVCVVDLCGTVLYDRAQPFDV ASLPISDVLDEVAGIMRDTLEQLHSARRHVAQVMVSAPGVIKQPAGTVHLASNLGWRDVP LRSQLLQRLDADISLQVENDAKLAAVAEYRRYEDSDVRDLVYLSGDIGVGAGIIAAGQLM RGWSGFSGEVGHLHLDPRNLPCHCGRTGCWEARVGLPEFLAHTGDRLGAQPIDRLLTQIQ DRATRGDQQVLNALDDLATSLAEGLSVVIDMLNPRVVVLGGYFSWFTDFLIPPIAADLTA RRLDPGAGALLAGAQLGMVSSAHGAALTALDSVFVNPLSVPQC >gi|302034494|gb|GL383257.1| GENE 188 189783 - 191126 1241 447 aa, chain + ## HITS:1 COG:mlr7000 KEGG:ns NR:ns ## COG: mlr7000 COG1653 # Protein_GI_number: 13475830 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Mesorhizobium loti # 1 355 1 327 414 64 26.0 4e-10 MQLTRRALMVGLAASAATVPLAACSPGSRTTASTSGGAGKASGVIKVAAFENAYGAAIYK QVAEAFEKATGAKVEFTVSKTIDQELTPQVAAGNFPDVVFMGVGGKTGFTDKFVQNKSLE PLNDILKITNKGETTTVGDKLLPGMVGNLTTNPYDDDRLMLAPTFMAPAGLVYNKTLFKK NGWTLPATWDEFFALGDEFKAKGVSLFTYPTAGYFDTFFFALLSSIGGDDYFKKVMSYEK NIWTGSEATQALNLVGKLLTQYTLPQMVGYANNQDYTKNQAALMADKALFCPDGSWVAGE MKDAPRSAGFAWGLTTVPAMKKEDRHLTSFIESVWIPSGAKNKASAKTFIAWLYSDKATG LFAKAGAAMPTKTGTKGLPAEVAPFYTVYDEPGLKSTIGGFKSAKAVPGIDMKTALLDSV DSVASGKLSVKDWQAKVNEASNKLGGH >gi|302034494|gb|GL383257.1| GENE 189 191227 - 192105 755 292 aa, chain + ## HITS:1 COG:BS_yurN KEGG:ns NR:ns ## COG: BS_yurN COG1175 # Protein_GI_number: 16080312 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Bacillus subtilis # 10 280 11 281 292 157 35.0 3e-38 MGGGGPFAALCILPALVLYVLFLVYPTLNVFRMSLFDWNGLGNAPSFIGLDNFAALIHDP AFVRAFENTLFILVVVTIVTICSSIFIAAVLTRETLVGAGWYRFVLYLPSVLSIVVVAAI FSAVFDQNNGLVNGLLQALGLGHGPVWLGDQNVVMYSVAIAMVWQSLGYYVVLYMAGMSS VPVEIYESASLDGAGRMTQLGSITIPLIWSNIRTTLTFFVLSSVNLAFVLVKALTDGGPN GSSEVLLNYMYKQAFTNSAYGYGMAIGVVTFLFSFLVAMLISHVTRREVLQY >gi|302034494|gb|GL383257.1| GENE 190 192105 - 192986 867 293 aa, chain + ## HITS:1 COG:BS_yurM KEGG:ns NR:ns ## COG: BS_yurM COG0395 # Protein_GI_number: 16080311 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Bacillus subtilis # 21 293 40 299 300 125 31.0 1e-28 MSAVPTPSRADRRYRLAAHALLVIISILIIVPVAWVVMAAFKTKPEFFGSPWRLPDGLHW QNFVDAFVTAKMGIYFTDSLFVTVLGLVFSLSVAIPAAYAIARVPFRGRALVEGFLMAGL FINVNYIVVPIFLMLLGWDQALASWLPNGFFIDNLAVLALVYAATSLPFTVYLLVSFFRT IPAIYEEAAALDGSSRLRTMLSIMVPIARPAISTVILFNFLSFWNDFIISLTLIPGEHKT LQVGLLNLFQAQRAAADYGRLYAGMVIVMVPVLLLYATIQKRLVTGIGGGGLK >gi|302034494|gb|GL383257.1| GENE 191 193003 - 193179 185 58 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|289424703|ref|ZP_06426486.1| ## NR: gi|289424703|ref|ZP_06426486.1| hypothetical protein HMPREF1034_1734 [Propionibacterium acnes SK187] hypothetical protein HMPREF1034_1734 [Propionibacterium acnes SK187] hypothetical protein PAZ_c00930 [Propionibacterium acnes 266] # 1 58 1 58 58 74 100.0 2e-12 MSDKMSQVFGWLAFALVLGACVVVMVAMRTTGWVQAGIMALALGVVIAVLGVYNRRYV >gi|302034494|gb|GL383257.1| GENE 192 193181 - 194245 599 354 aa, chain + ## HITS:1 COG:TM1200 KEGG:ns NR:ns ## COG: TM1200 COG1609 # Protein_GI_number: 15643956 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Thermotoga maritima # 16 347 7 332 333 145 31.0 1e-34 MSASGFSPPLTGRAPTMADVAKRADVSPQTVSRVVRGQTNVSEVTRLKVELAIDELGYRR TGIARALVTGHTMTLGVLTQSSVAYSRAAYVAAMTSAARRHGYYVAAASVTSTVSEAVCQ SIEHLRQQGVDGIVVAVPVYDVEALAQAARGLPAVVFGGSSSEAVPDGFSDGTGHHAVCI DQERIGVLATEHLLELGHDTVWHVAGPSTWADASGRQAGWAATLAKHGRPEPPVLIGDWS AESGWRLGTLLARMEEVTAIFAASDDMAFGILRALVDRGRRVPEDVSVVGADDVPLAAFA PVALTTVRQSFQDLGTAAIDLLVDMVERPDREHHGVLMEPELVLRSSTAPRHAG >gi|302034494|gb|GL383257.1| GENE 193 194235 - 194888 169 217 aa, chain + ## HITS:1 COG:no KEGG:PPA0089 NR:ns ## KEGG: PPA0089 # Name: not_defined # Def: glycosyl hydrolase family protein # Organism: P.acnes # Pathway: not_defined # 1 201 1 201 729 396 98.0 1e-109 MLAESWRLHYRSPAAKWEAYGLPIGNGRLGAVLRGDIARDVVQFNENSLWAGSNNYDNGL CGVADDVFDTSMHGFGRYLDFGRVTISFADLDESTVSGYERALDLRHAVAYACFDAGGVR HQRSAFASREADVIVLRYSASAPFGCTVRLESAQGVPSRVAGDTSVVFDGVLGNGLRYCA SLVLLECDGRSIAYGDRIVVEARRHWRSSLTPVPTTR >gi|302034494|gb|GL383257.1| GENE 194 194849 - 196423 622 524 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3092 NR:ns ## KEGG: HMPREF0675_3092 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 524 206 729 729 1047 98.0 0 MALVLDAGTDYALSAVAGWRGVNPRPVVDERICSATALGWERLHDAHVTKFSAVMDRCRL RWGRPVPELDAQPTDVRLRRYRDGAADVGLEQLAVVLGRYLLVSSSRAEGLPANLQGLWN DSNDPAWGSDYHTNINVQMNYWGAEVTGLGEEHMALLNFVGEVAVPSRSATRAMCGPDVP GWTARTSQSPLGGNGWQPNTVASAWYAHHVYEHWAFTRDDEWLRTRGLPMLAEICRFWEH QLVERDDGMIVTPAGWSPEHGPREDGVAYDQQIVWDLFTNLLECSRALGVEDDLYYRVER LRDRLAPNQVGCWGQLQEWQDDRDDPTELHRHTSHLFAVYPGRQITTDTPELQAAALVSL KARCGEPPPVAGAPTVAPFRAEMVVGDSRRSWTWPWRAALFARLGDGYRAGEMVRGLLTY NMLPNLWTTHPPFQVDGNLGLVGAVAEMLLQSHDGRIRLLPALPPAWEAEGEAIGLRARG GYRVSMQWCDGQVIWFEIVADRGHAEDVIVVVNGREHRIRPDKR >gi|302034494|gb|GL383257.1| GENE 195 196783 - 197910 1120 375 aa, chain + ## HITS:1 COG:MT3090 KEGG:ns NR:ns ## COG: MT3090 COG0205 # Protein_GI_number: 15842568 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphofructokinase # Organism: Mycobacterium tuberculosis CDC1551 # 6 357 2 331 343 233 40.0 5e-61 MSKKKKVGILTAGGDCPGLNAAIRGFGKAAIRQHDMELIGIQDGFLGLAGNRTISLDPRA LSGILTVGGTILGTSRDKVNHMIIDGEERDMVPTIVENYEKLGLDALVTLGGGGTAKNAY KLAKAGLNVLHLPKTIDNDIVGTDDSFGFSTALEIATEAIDRLHSTAHSHHRIILAEIMG HRAGWLALGSGIAGGADVILLPEVPYKLDSIVQAVENRQKQGLNFSVIAVAEGARDEADS AAMAGAQALVDASKTSETKAAAKKAKKDLEHSMRDNTLKLATQLEEATGLESRVSILGYV QRGGIPCAHDRLLATRLGTVGAKLVDDGEFGIMVAAQGGDATTVPLKDVAGKVKYVPADH PWVKAARQVGTGLGD >gi|302034494|gb|GL383257.1| GENE 196 197948 - 198529 324 193 aa, chain - ## HITS:1 COG:MT2696 KEGG:ns NR:ns ## COG: MT2696 COG2345 # Protein_GI_number: 15842161 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Mycobacterium tuberculosis CDC1551 # 37 182 34 201 224 90 38.0 2e-18 MSTRHDDTASLVDPGSQKRIDEVADALRRRGGSATSAELASDLGIHPSTARFHLDRLVEQ RRVEATRRHRATRGRPHTVFTLVSDEGPRAYRLLAQMLVDEVAISNNPTAMAMRIGQRWG RHRRGDLIAVLDDMGFSPAAEEGGIVLRHCPFLDLARDHPQVVCSLHCGVVEGVTGQAAT IDANPGVRCVVHT >gi|302034494|gb|GL383257.1| GENE 197 198526 - 201267 1806 913 aa, chain - ## HITS:1 COG:NMB1623 KEGG:ns NR:ns ## COG: NMB1623 COG2132 # Protein_GI_number: 15677473 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Putative multicopper oxidases # Organism: Neisseria meningitidis MC58 # 672 911 102 345 390 135 34.0 6e-31 MPEITSAPVGRKPDTNKRSWHRKASRPVSGWLVALLIVAVANPWIPQSRWLLVHMVTLGV ATTSIMVWGQYFTEAILHNNLTDTDRSRQVLRIRLLAVGIVITCIGMVVTWPWITVTGAA VIGSTLTWYAFALGHQVRHALPGRFDSTVWFYCAAACLLPLGATLGAIMAFSPTEPWRTR LLVAHQALNLLGFVGLTVVGTLITLWPTVLRTKMQPAQDRHGKISLCVMFVAVAATTTGA LCGLWWLAALGVTAHIVGICIVLGDLVACSVHRPPRDFPGFTMGAAICWMLVWLVWLAWK LASNGTRLLADDIFTLSVPVIVGFLLQLLIGAMSYLMPMVMGGGPKIVRATNAKMHAYGA LRATITNAGLLLWVLAMGTWTRRIGMVLTVVGLATFLPATAAMVRTGVPMLKEKGCQMAA RKAASEIGEAPDPDNGPAQAAPVASLDRSATSKPAEPAPTAPPNRRSFVGAFAGLATALT AAAVGHHLDQTTPTDDTNGSAAVVGHVAPTGHTTTVNITAKGMKYHPSTITVPAGDQLVV EITNKDPNQVHDLQFANGAHSPRLAPGDHATVKVGVITGPTEGWCTIVGHKSMGMVLDVQ VAGMSGVHDRDDHVDSADPRRRIDLTKAPGKDFRTRDAVLPPLMTGRVHRMTLIAQESVQ EIAPETTIDAMTYNGHYMAPVIHARIGDEMRVHLVNRGTMGHSLDFHAGTVSPTKVMRTI APGQELDYNFTLHRAGIWLYHCSTAPMSAHIAAGMFGAVIVPPHDLPRADREFYLVQSET YLSEHNEAEVNTAKIANETPDLTMFNGHANQYVFEPLKARVGERVRIWVLAAGPSRGCSF HVVGTQFDTVFKEGAYTLKRGNPEGGGCQALDLASAQGGFVEMVFEEPGRYTFVNHSFVE MERGAKGFIEVTT >gi|302034494|gb|GL383257.1| GENE 198 201260 - 202393 852 377 aa, chain - ## HITS:1 COG:no KEGG:PPA0093 NR:ns ## KEGG: PPA0093 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 377 1 377 377 549 99.0 1e-155 MPTSSAGSHRAWLMVGAGISLLAGLDGALLLLGVWSPVMSTRLSKWHGPLMVLGFVGTVI CLERAVALGHRLAYLVPAMSGFGVIVLLAPLPFDSARAGLALLTLAQLGLLTIYVPLWRR SHDDAVVIQGAGAFCAAGAAALLTTGAHVSQIVGWLACYMILTICGERLELSRLTMARNR ALSALCLAVVAALLVSVVSPAIGWRVLGVVLIGLAVWLCRHDVARGGLRRGGQAAYIGTL LMIGYLWLATAGIVCTIQRPPTSRNGYDAVVHSLFLGFTMGMILGHAPIILPAVLQVRLE WTTWFWLPAFLLEASLLVRIGIGDGLDRSAAVQAGGTVNVLSLLTLVAVIATHIQPRTRA RTHLKSTPRSRSGEDHA >gi|302034494|gb|GL383257.1| GENE 199 202823 - 204295 1243 490 aa, chain + ## HITS:1 COG:VC2698 KEGG:ns NR:ns ## COG: VC2698 COG1027 # Protein_GI_number: 15642693 # Func_class: E Amino acid transport and metabolism # Function: Aspartate ammonia-lyase # Organism: Vibrio cholerae # 5 472 16 483 483 622 64.0 1e-178 MTEIRIEEDLLGKREISNEHYYGIHTLRALENFQISRGCMNDEPDFIRGMVQVKKATALT NKQLKVLPSDVADAIVAACDAILDDGRCMDQFPTDSFQGGAGTSINMNTNEVVANLALEM LGYPKGTYDVIHPNDDVNKSQSTNDAYPTGFRLGVYALLEGLKRAVADLADSFDAKAEEF ADVLKMGRTQLQDAVPMTLGEEFDGYAHNIRAELDRLDIGSDLLVEVNLGGTAIGTRINT PDGYAELAAEKLAEVTGYPIRPSTNLMESSYDNGAYIAVHSIIKRLAAKISKICNDLRLL SSGPRAGLKEINLPEMQAGSSIMPAKVNPVIPEVVNQICFKVFGNDVTVCFAAEAGQLEL NVMEPALSQAMFESIHLLTNACDTLRGKCIDGITANVERCREYVTNSIGIVTYLNDVIGH HQGDLIGEEAARTGKSVREVVLEHDLIPEERLDEIMSTQNFLHPRYSGRTYEPSDRGLPE DPRTFVSERC >gi|302034494|gb|GL383257.1| GENE 200 204302 - 205600 750 432 aa, chain + ## HITS:1 COG:VC2699 KEGG:ns NR:ns ## COG: VC2699 COG2704 # Protein_GI_number: 15642694 # Func_class: R General function prediction only # Function: Anaerobic C4-dicarboxylate transporter # Organism: Vibrio cholerae # 1 420 16 439 451 327 53.0 3e-89 MMLFIQLAVVLLFIFLGARKGGLGIAYAGGAGVIVLGLLGCKVDPGTGIPWDVIGVIISV ISCVAAMEVAGGLELLVMLSERILRHNPKRITFLAPTVTFFMTVLCGTGHVAFATLPVIA EVAKEQKVRPSRPLSIAAVASQIGICASPISAAMVAMAAIVGPLGVSYPKLVLVSIAGGY VGSMIGAVVSSKLGCELELDPVYLQRLEKDQISHREADNYNIKPYARRSLIIFVVSLVVV MAYAAAITAVDKPPLPRGAAIMTFMMTAALVIATLCKVPLNEITSQATYKSGTSAAICVM GVAWLGNTFVSSNIDTIKAAGSGVIHSAPWLLFVVLFLAASLLYSQAATTVTFMPVAAAL GLPASVLVGCFAAASALFLLPTYPTVVAAVEMDDTGTTRIGKYIFNHSFLIPGIVSISVA CLASYGVMLVVG >gi|302034494|gb|GL383257.1| GENE 201 205701 - 205982 268 93 aa, chain - ## HITS:1 COG:DR1844 KEGG:ns NR:ns ## COG: DR1844 COG2388 # Protein_GI_number: 15806844 # Func_class: R General function prediction only # Function: Predicted acetyltransferase # Organism: Deinococcus radiodurans # 8 88 6 86 93 83 45.0 1e-16 MSETTVTKNDQQSRYEAYIGGELAGFAEFRREGDVIVMLHTETFEAFSGKGVGSALARFA LDDIACQNLSVRPDCTFIKGWLDKHPDHPVNVI >gi|302034494|gb|GL383257.1| GENE 202 205999 - 206238 79 79 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|332674497|gb|AEE71313.1| ## NR: gi|332674497|gb|AEE71313.1| hypothetical protein PAZ_c01040 [Propionibacterium acnes 266] # 29 79 1 51 51 94 96.0 3e-18 MRCASWSTTGPSAPTVREYSSLGAGDPLVFVDGLLGSIGMTTPLYELSALFQIAPQQGHL QAHNATGEILYKKGRTQGR >gi|302034494|gb|GL383257.1| GENE 203 206120 - 207571 1279 483 aa, chain + ## HITS:1 COG:Cgl0256 KEGG:ns NR:ns ## COG: Cgl0256 COG0753 # Protein_GI_number: 19551506 # Func_class: P Inorganic ion transport and metabolism # Function: Catalase # Organism: Corynebacterium glutamicum # 6 476 20 504 516 498 51.0 1e-141 MPIDPSKPSTNTNGSPAPSDEYSLTVGADGPVVLHDAHLIDTLAHFNRENIPERKPHAKG SGAFGHLEVTADVSEYTKASFLQKGRETPMLARFSTVAGELGSPDTWRDVRGFSLKFYTD EGNFDMVGNNTPVFFMRDPMKFPHFIRSQKRLPNSGLRSPNMMYDYWSLSPESAHQVAYL MGPRGIPLSYRTMNGYSSHTYSWVNAEGKITWVKYHFISDQGVHNMTADRAKAIVGDHPD IHREDLFNHIADGDYPSWTVKVQLMPYDEAKDYRFNPFDITKVWPHKDYPLHTIGKFTLD RNPENFFAQIEQAAFSPSNTVEGTGLSPDRMLLGRVFAYNDAARNRLGVNYEQLPVNRPT TPTNQYTFDGQMAFEHSGSAPTYAPNSYGRDFATGYRTGSEATWEADGELVRSAQTRHAE DDDFGQAHALVHDVFSDAERDELVDTLVDLMANFDMEEPVIGNALSYWRNIDAGIAEATE GRI >gi|302034494|gb|GL383257.1| GENE 204 207609 - 209354 1193 581 aa, chain - ## HITS:1 COG:Cgl1399 KEGG:ns NR:ns ## COG: Cgl1399 COG1132 # Protein_GI_number: 19552649 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Corynebacterium glutamicum # 7 578 3 578 581 284 36.0 4e-76 MSTPRSLPLATAAQVRQEVQRAARGVRGYFIGAIVVITAASLLDLTVPVATGWIIDAAKA HRPTSALLTPALVMAAAVIGSRICNGAAQSLTPSFFTTIITRLRESMIAVGLGLDQQRVE KAGTADLVSRASDDVTAVRDAANGALPRLVNTMIMVIVSVGALASLHPLFFVPVFLAGVL YGLAIREFLRTAPPVYRAERNASTTQSQRILSTIHGVDVVRAFGLENLRTRAVANGSWQA IRWNLRGRFLGNTLVVRLLAGEAVATIGVAWTGYLLVTTDRLSVGAAATAVLVLLRLFSP VRFLLMFLNNLQAAWVCLQRVVGVIQARHDKPAVSERYQRGPTSIHVDQVSFGYQDGPDV LHTVSLDIPAGHTVVLVGESGAGKSTLAALVAGLLEPRQGSITMISGHARTVLISQEIHT FSGTLFDDVALGLAGQAEDWPDERVRDAVLAALERVGADWVEQLPHGVDTVVGRLGIRLS PAQAQQVALARALLADPPVIILDEATAEAGSSGATALDRAAAEAVRGRTALVVAHRLSQV TMADEVAVMDNGRIVEVGAPEQLRQSDGPFAALWRVWSNQH >gi|302034494|gb|GL383257.1| GENE 205 209351 - 210979 1118 542 aa, chain - ## HITS:1 COG:Cgl1398 KEGG:ns NR:ns ## COG: Cgl1398 COG1132 # Protein_GI_number: 19552648 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Corynebacterium glutamicum # 28 505 1 436 455 181 30.0 3e-45 MARDGRRWLLPGSVSSAFVSLVNIGVPMALGRAIDDGVVAADAAALTGWLALVALAYLVR AIAQTIRMQTNVGAGLAEHDLRIQALERITAPEGIGGRSRLPGDLLAVVVTDVRAVSRAF IALTSIPGNVVTLLGALISMTLINGWLALATVCIVPLLILLSVKGVAPVKRSTRRERRAE AAVAGSAADLTSGLRIIQGLSAQRRATARFRTASRQGLDATLRTRRVKGVYTGTINASVG VFITALTVLAGWLTLAGRISVGELVTVVGLAQTLGPPLRALGVDTATMLATAHASGDRFC ELRDSPAAWQIHPDDGARTTPGDGPVELHIPVRDFQLDVAGGTHVGVMAPQSVCDALAEA IDHGSETVLNGVPASRLNPAQRRRLVLVAPRSPELFDDTARANIVLDSQTTVARLNAVVD AAALDTVVAVLPRGLETEVGEGGRHVSGGQRQRLALARALLHSPDGLVLIDPTTSIDAVT TATIARKVRQLRAGRTTIIATTSPALLDQMDEVVLLDADGRQIARAPHRELLARDDYREM LS >gi|302034494|gb|GL383257.1| GENE 206 211114 - 212100 776 328 aa, chain - ## HITS:1 COG:MA0877_1 KEGG:ns NR:ns ## COG: MA0877_1 COG1239 # Protein_GI_number: 20089761 # Func_class: H Coenzyme transport and metabolism # Function: Mg-chelatase subunit ChlI # Organism: Methanosarcina acetivorans str.C2A # 7 323 9 328 384 345 55.0 6e-95 MAQRPVYPFCTIVGQEEMKLALILATISPDLSGVLIRGEKGTAKSTAVRGLAALLPQHRE IPGPYHLSPDEYPTHAVALNLPEVMPEPRTVQVPVVELPVGATEDRVTGTLDMETALREG RRRFEPGLLAAAHRAILYVDEVNLLDDHVVDLLLDSAAMGVNTVEREGVSVTHPARFTLV GTMNPEEGELRPQLLDRFGLCVTVSGEDDPDKRTEVIRRRMAFEDDPGGFSRTWEQDGHK LSERIQRATELVTQVVISDETLTTAARTCINAHVDGHRADIMMVRAARTLAAWNGCTEIT TEDLSQAARLVLPHRMRRQPLESVGRAV >gi|302034494|gb|GL383257.1| GENE 207 212102 - 214066 1156 654 aa, chain - ## HITS:1 COG:Cgl1951 KEGG:ns NR:ns ## COG: Cgl1951 COG1239 # Protein_GI_number: 19553201 # Func_class: H Coenzyme transport and metabolism # Function: Mg-chelatase subunit ChlI # Organism: Corynebacterium glutamicum # 3 369 8 365 367 276 44.0 6e-74 MTYPFTAVVGQDEARLALLLCAVNPRIGGVILSGEKGTAKSTVVRGLVELLPGHVMRTLA LGTTEDRLVGGLDLEATLVAGRPVLQPGLLSEVDGGVLYIDEVNLLDDHLVDLVIDACAG TVRVEREGLTASLPSRFVLVGTMNPEEGALRPQLLDRFGLCIDVHGESDPAVRAEIIRRR LDHDADPAEFDHRWQSDQNRQAAVIERARHIVAGVRLDEVVTELISCLCRQNHVAGHRAD IVMAEATRAHAALVGRGVATEDDVLTISEMVLRHRRRVETPSESPPPRNQHPDDQPDQPE QRPREPERPDPDVEKRQAGENLATPPSSSGEQQPEYHDGPQNQRDDGQHDPRKQPSGSGE QVVAAGDPFAVRPLEPSQDRFARRACGRRLRTRSNDRRGRYVSARPTDRPDDLALDATLR AAAVHQKSRRATERPDLAVHVKPIDWRAKVRAGRAASCVIFVVDASGSMGSRGRMTASKG AVLSLLLDAYVKRDRVCLIGFRRDRAEVLVPVTSSVEVAQHGLAELPVGGRTPLSAGLIK ACEVVRPLLLKDPGLRPLLILVTDGRGNVSLDGRPNSQATDEAIRVATKLGVDTRLSWVV IDTEDPRGIQLSRARDIATALGGPCLRIDDLRADDLVNVVSRLDPSHQSPRKDR >gi|302034494|gb|GL383257.1| GENE 208 214066 - 217971 2834 1301 aa, chain - ## HITS:1 COG:MJ0908 KEGG:ns NR:ns ## COG: MJ0908 COG1429 # Protein_GI_number: 15669098 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin biosynthesis protein CobN and related Mg-chelatases # Organism: Methanococcus jannaschii # 1 1269 5 1230 1232 739 33.0 0 MTTLSFFSAIGGELTLVSQALSRLRTRGLEITLFGRTKDQITDPELARAFAQAAARSDAI VLSFHGGTTSCPAWPALVEAWKNRRESGLPLPWIHIQPTSGDDDGLLAAQDWASGLDDGT WRGLIGLLEMGGPDNVEAALRILVDRVRGGSAPIPDVIPAPTEGIWHPRHGLFTNLAEYR HHLDPDLPTVGITFPRSYWLEHNTAHIEALIEAIERLDANTVPFFCLRLPDARRGNPSMA QTLEALLRDEDGNRVIDTLIDVHGMSMTAGVPANADAYPKLGVSVLHALTSYAPLAAWKA QGMGAMDVATQAAQPEFDGALITKFLATREVDRVDDLTGAVVPHMVPVPGRPEAMAELAL SWARLARTPANQRKVTIVFHHHPPRNDRIGCATGLDTFESVRRLLVRMAEDGYDVPEQFD SADDLAQVLLSSLTCDQRWLTPEQMYQRAEVHADLATSRSWYRALPASVRESMDRAWGPH PGSLFVHHDEFSFAGHLDGNVLLTIQPPRGNFEAVTDSDIHDPLLPPPHHYLAHYRWIRD VFKAEAVIHVGTHGSLEWLPGKGLGLSEECYPELALDRMVNIYPYIINNPGEGTQAKRRS AAALIDHLTPPMRQAELYDSTAEIDRILREYAGAQSQSPQRARLVAEQVWDAVTKTGLDT DLGLTSADVDADPVEVLDRVHHHLLDLQDREISDGLHVLGQVVAGHDDPIAAKVEYVAQL TRQLNGPVPSLREAVLNAWGTSLDEVSAKAGEPVPVTADLPDGLTGRQLMSEAHRRCVKL LTPVVVRHRDRHPDDTEAHDLAAQLCHEQLGAERGDVIETLTWVLTDLMPRLDATNNEID AIMTALDGGFVAPGPSGAPSRGNAHILPSGRNFFSLDPQTMPTPTGWREGVELADQLLRG YAEAHPDQPWPRTVGVVVWGTPNMRSGGADIAEILYLMGVRPVWESSGLVSGLQIIEPCE LGRPRIDVSPRISGLFRDAFPNLVEMIDRAVRMVAALPEPDDDNMLRAHVEADVVEMTAR GIDVEQARRKATLRVFGCPPGGYGAGVEELIETKAWQGKADLGRAYIAASSHAYGEGVLG QVETERFTASLKRMDVTVKNEDTREYDMLSCTDFYNYYGGLIAAATTVRGEAPMSLVGDS SDPTRIATRTTTEETRLILRSRILNPSWIEGLQRHGYKGAGDLSAVLDILIGWDATADVV DDGLWERVARRYALDPAMQEWFRQVNPHALHNIVDKLLDAAQRHVWEANPSTVEELENTY ADIEGTIEEVSDDPAIAPNTRVGAPPQNPAGGLDLSELGLV >gi|302034494|gb|GL383257.1| GENE 209 217968 - 219062 315 364 aa, chain - ## HITS:1 COG:SMc03767 KEGG:ns NR:ns ## COG: SMc03767 COG0641 # Protein_GI_number: 15966905 # Func_class: R General function prediction only # Function: Arylsulfatase regulator (Fe-S oxidoreductase) # Organism: Sinorhizobium meliloti # 7 232 1 232 372 82 30.0 9e-16 MTVRYLVLWPTAACDLTCPYCYRRDRRGGRMPVEVADTALDLVAEDVRTTGRPAHVQLAG GEPTLVPSLIEHVAKRVVEIRWEKVTCGIQTNAARLDGDIIAMLKRHSVRVGVSVDGPPP VHEKTRGSAAQTFRGLLALAHADIPVRVTTVLSALNVEHLDELAVTLATLPNVTGFGLDP LVAIGSATGRDDLVPCNEAVIDGITTLYRRLAQINALRATPLRWRELETVRTALRRGPVP TTSAVDPAGRTLLPVANHPYCHAAVRESMAVAPGGSVYPCSQAVGDMASRAGTVHSIDWE SLRRRFSQDRHTLRGPCHRCALAGRCPGDCPSRVEANALADPEQRRTPLTCLIDSTLARL ESAS >gi|302034494|gb|GL383257.1| GENE 210 219059 - 220060 680 333 aa, chain - ## HITS:1 COG:alr4033 KEGG:ns NR:ns ## COG: alr4033 COG1120 # Protein_GI_number: 17231525 # Func_class: P Inorganic ion transport and metabolism; H Coenzyme transport and metabolism # Function: ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components # Organism: Nostoc sp. PCC 7120 # 4 288 2 287 333 235 41.0 1e-61 MTGLALSNLTVGYRSGRHVTRVLSGVTGSVVAGQMIGLVGPNGAGKSTLLRSVAGLQPSL SGEVQINGTPTSRMSRRQVAQALSTVLTDRVSVARLPCRDVVSLGRHPHSGIGGRLRPHD HAVIDESLTAVGAADLADAFIGELSDGQRQRVMVARALAQEPSILLLDEPTSFLDPPGRI ALLGMLRKVCTARNIAVVVCSHDIEPVMRYADTLWVAGHNTDVVIGAPEDLARNGALEAA FRTEGITFDLRTLTFWQSDAGRPVARVVGHGVDADLAHHVLTRSGYRVVEQPGDEVLTIG VTDEGWAVDDCVLPTLSQLHEHLIGRHRERARS >gi|302034494|gb|GL383257.1| GENE 211 220057 - 220989 756 310 aa, chain - ## HITS:1 COG:alr4032 KEGG:ns NR:ns ## COG: alr4032 COG0609 # Protein_GI_number: 17231524 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Nostoc sp. PCC 7120 # 17 302 69 353 362 229 51.0 6e-60 MTVITGGTNVDPVSLTIIHDVREPRTITALLVGAALGMSGLEMQTLFRNPLADPYVLGIS SGASLGVALVVLSTSASAGAATFASGLGIGPDLLIMVAAALGAAVVLLIVMLAGRFIHSS TILLLLGVMIGYFVSSGVTVLLSRASPELIAQYTRWQFGSYHGVTWQNLRVMVPIIVAMI LASLLLAKPLNALLLGERYAQTMGMNLKVMRTLLVASTAILAGAATAFCGPIGFLGIAIP HLTRGVLGTADHRHLLPGCILTGSSLALMADILAQLPGDDVLPVNAVNAVFGAPVVMVIL IRWYREAEAT >gi|302034494|gb|GL383257.1| GENE 212 221279 - 222523 1143 414 aa, chain - ## HITS:1 COG:alr4031 KEGG:ns NR:ns ## COG: alr4031 COG0614 # Protein_GI_number: 17231523 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Nostoc sp. PCC 7120 # 17 410 45 423 426 270 35.0 5e-72 MSINRLVAGLAATTMCVATLTGCSHSEQSGSSANTSSSGSSRQGCIKDFDPSKDYFGDKA TLGDARDITVSYHKSYKVVTLKHPSNTATKPVQYVLVQCGVPDPHLDGELAKAQRITIPT TKVALGSTTLPMKFQMLGKLDSVAGMVNVDRVGNPDTRQALKDHKVASFAAGDNATEINT EKLAALRPDLFIFNLVSGSDNTSKIDKIKEMGIPVVAEPNFLESTPLGRAEWIKYDSLFV NAEKTANQKYDEIAEKYHATAKRTAKVKTRPTVLHGSQYKGVWYIKPNENYAIQFLRDAG GEYVFKDLHGVASRKLDTEAVIKQAHDADFWIDGPEKSSIPQILKADPRLKSLKALDNGN MWDATPRADPKHGNDYWQTGVVRPDLVLANLTAILHPELDRDHQFHFYRKATAK >gi|302034494|gb|GL383257.1| GENE 213 222580 - 223830 1221 416 aa, chain - ## HITS:1 COG:alr4031 KEGG:ns NR:ns ## COG: alr4031 COG0614 # Protein_GI_number: 17231523 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Nostoc sp. PCC 7120 # 56 415 68 424 426 250 34.0 4e-66 MPRRISALITLFVAPALALTGCSGSSNRTTSLNTSTATPSVGTGANMSGCIKSGEFDKDK DYFGDKATFTGARNVHVSYHKSYKVLTLGEQDRPAQTFVLLQCGAPKPALTGDLAKAPII DVPVKRVVASSTTQIPVFHTLGALDSIVGVNQIEQIYRGPARKALEARHIPSYGSSRMQI DTEKIISLKPDAVLAASSEVGEFKQVQSAGIPVLQDLDYLESTPLARAEWMKAYGILLNK EGAATKSFDSIAERYAEVAKKAKNAADKPSVLVGQETKGQWYVPGADSYMIKFMTDAGAS DVMAQAVKGNGATPTDAEVVFKYGSKADFWLNGNYMSMTTWHGKDDALKQNPRYANLSAF QHGNVWNPSKRTAPDTGNDFWQSGIVQPDVVLADLTYIFHPDLMKGYTPYYYTKLS >gi|302034494|gb|GL383257.1| GENE 214 223845 - 224075 131 76 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|328758508|gb|EGF72124.1| ## NR: gi|328758508|gb|EGF72124.1| conserved domain protein [Propionibacterium acnes HL025PA2] # 1 76 1 76 76 134 100.0 3e-30 MHGVSVRLPRVGFGLGHSAVGEVGANPTLSRNGNACKAQSGRLSEEWQLLTLAVGVCRAH YVRLSETCGMTAGRTA >gi|302034494|gb|GL383257.1| GENE 215 224132 - 224905 585 257 aa, chain - ## HITS:1 COG:no KEGG:PPA0108 NR:ns ## KEGG: PPA0108 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 257 1 257 257 479 100.0 1e-134 MTAPNRVPSRCLSITRLRDLLLADIPASRLVIACDTIGGIGPRPDDSYPADPVWCAHLGA RVPLLEVLCAGARPLVLVDTLCQDSASAQPMIAEFRRCALDAGIDPDAVTGSTEDNVATT QTGVGVTIIGVMHHEDVPKSLDGDVLVCVGAPISAPNDDVALGRREIVGVTEVKALMASG KVHDCVPVGSHGVAWEAKQLASTAGLRVAFQPTDVDLTRSGGPATCVVMACAKTNLEQLH ALVNPERPWAVIGHLRS >gi|302034494|gb|GL383257.1| GENE 216 224945 - 226729 1814 594 aa, chain - ## HITS:1 COG:SA0102 KEGG:ns NR:ns ## COG: SA0102 COG4716 # Protein_GI_number: 15925810 # Func_class: S Function unknown # Function: Myosin-crossreactive antigen # Organism: Staphylococcus aureus N315 # 34 571 14 551 591 492 45.0 1e-138 MTNFQDIYQHSYPVSPDGNPFVQNDLGRYTQNHPVPPDDVAERKAYLVGSGIASLLAAAY LIRDAQMPGENITILEEMSEPGGAFDGAGDTEKGFIARGGREMGQHFECFWDIMKDIPAL EMPEPYSVLDEFRIVNENDPNINPCRIINSCGHKRDASKMGLNKKGQLDIMRLLLAKESD TYYKSIEDWFDEDFLQSTFYLLWKTMFAFEQWQSLTELKRYMHRFLQYLPGFSNLSCLRF SRYNQHDSFVVPLVKWLTEKGVNFQYDTLVYDVDLEITAHRKIARGILWRDKEGGEHRID MSAKDLVFVTNGSLTECTGYGDMDTPAPYHKDMQAGWELWRNLVRRSPAFGRPDVFCGDA DKTVWQSISFNFIGRDHPFLKKIKELTGNDPLSGRTVTGGIITAEDSSWCISLTMNRQPQ FHGQPEDWGVAWAYGLYPFEKGDVVNKTMLECTGEELLKEYCYHFGLLDQFEEVKAHTKV RIATMPWITAFFMPRGKGDRPEVIPDGCVNLACLGQFVETPDDCVFTTEGSARTAMIAVY GLLDLDRDIPPIWPTQYDIRSLLASAKTLNNGRLPGSWLLSKLLKNTYYEDILP >gi|302034494|gb|GL383257.1| GENE 217 226848 - 228557 1112 569 aa, chain + ## HITS:1 COG:Cgl1428_2 KEGG:ns NR:ns ## COG: Cgl1428_2 COG0351 # Protein_GI_number: 19552678 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase # Organism: Corynebacterium glutamicum # 64 368 1 309 309 271 51.0 2e-72 MFGQFSAAERTSWWGGILAHGHGVRLGGAEITPVEPDLVRTGEGMSEMTISDALAERGTI PRVLSIAGTDPSGEAGTAADTKSIIAAGGYAMAVVTSLVAQNTEGVRAIHTPPTDFLVQQ LAAVSDDVRIDAVKTGMLGTAEIVDAVATFLDEHRPLVVVVDPVMVATSGDRLLAPDAEA AMREFCRRATVITPNIPELAVLCQSEPATTPEQAVEQARRWAAETGVAVVVKTGHLNSQR VDNMWVTTEGAMHVAPAARVETTNTHGTGCSLSSALATRLGAGDTPGDALAWVTDWLHEA IQYGSALNVGKGHGPVDHSHRARRLAEDASAVAWFAPIDPLESPQGLVVSAEPAPDAVVA PAGPWTTALWQASGDIARRIEDSDFVAVLVDGTLSKPAFEFYLGQDAQYLTYYSRALASL AARAVDPEESVWWAQSSQACLVEEAELHRSWLGDHIDVVAGPVTLAYTDFLLARALGDDY VVGTAAVLPCFWLYAHLGAKVPHVPDDHPYASWLQTYGDPEFVEGASHTIGLVEKAFQNA SAVTRARAAHAYLTACRHELEFFDQALRV >gi|302034494|gb|GL383257.1| GENE 218 228681 - 228911 167 76 aa, chain + ## HITS:1 COG:no KEGG:PPA0111 NR:ns ## KEGG: PPA0111 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 76 1 76 76 117 98.0 1e-25 MVHCPTATVAARPEGTPWVLDSTTIGLAPVRTRMAREFLDAGPDVAGEVAAARAGGPGSF RAQLRDALDKAARTAK >gi|302034494|gb|GL383257.1| GENE 219 228920 - 229573 449 217 aa, chain + ## HITS:1 COG:Cgl1990 KEGG:ns NR:ns ## COG: Cgl1990 COG0352 # Protein_GI_number: 19553240 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate synthase # Organism: Corynebacterium glutamicum # 3 217 6 221 221 186 53.0 3e-47 MTLDLRCYLVTSGIDRHTIETAAAAAGAGAGMVQVRAKELSTRDLLSLVLQVGEAVRRAN PATRVVVDDRADVAWAAIRARGNVHGVHVGLTDLPVRDARAMLGPDAIVGYTTGTLDLVR SAEPFADALDYVGAGPFRPTPTKESGRSPLGVQGYPALVGASSLPVVAIGDVQVADVPVL AATGVAGVAMVRAIMASDDPAAVVRQVVQSFDEVRVS >gi|302034494|gb|GL383257.1| GENE 220 229831 - 230790 568 319 aa, chain - ## HITS:1 COG:no KEGG:PPA0113 NR:ns ## KEGG: PPA0113 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 319 1 319 319 609 99.0 1e-173 MRENFELELRSNGGVARIVRDSPLRGQADRSVTRGDTVRILPGVVATTGAARRVTTMIQA LKLWHRGATLVGMAALVLLGLKNPVTQRRWDYTGIQAIEAFSPTRRLRRPRIWVHRWHVP HHFTIEEEGIRVAIPEVSVIILAIQGQWDWVCQALRQRLVTPASCRAVRKALTGRYSKAE VDRALADIDLNPWSIPELELARILRATGITGHKPNHQVWVGEGNYRYVLDQAFQAEMLGV EMEGRSVHGTPEGYEAMMVRSAHLEQAGWRILHTTPTMLRRDPKFVLDWIINHLHKRHRP KTTLTNQVLRQIMNSAVPA >gi|302034494|gb|GL383257.1| GENE 221 231207 - 231437 91 76 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3119 NR:ns ## KEGG: HMPREF0675_3119 # Name: not_defined # Def: putative K+-transporting ATPase, F subunit # Organism: P.acnes_SK137 # Pathway: not_defined # 40 76 1 37 37 62 97.0 5e-09 MGGGATTGTPETPGRCQGACHARRHLAARCHRLVHPARPVREGGRCAMTILNLVAAILGI AAVVYLVIALIRPERF >gi|302034494|gb|GL383257.1| GENE 222 231437 - 233107 1483 556 aa, chain + ## HITS:1 COG:RSc3382 KEGG:ns NR:ns ## COG: RSc3382 COG2060 # Protein_GI_number: 17548099 # Func_class: P Inorganic ion transport and metabolism # Function: K+-transporting ATPase, A chain # Organism: Ralstonia solanacearum # 6 555 4 588 590 497 51.0 1e-140 MTWICFLAGLALLAIALGIAQHHLGTYMARVFTSDKDTRVETWCYRVMGVNPRAGQTWKS YARAVLAFSFCGVVLLYALQRLQPWLPWSLGKGSVNPAVSFNTAISFVTNTNWQAYSPEA TLGHFVQLAGLCVQNFVSAATGIAIAVALIRGFVGRGEHTIGNFWVDITRCTLRILMPIA AVAAFLLIVGGAVQNFTGFLHVTGVAGGNQVIPGGPVASQEAIKELGTNGGGFFNGNSSH PFENPQPWTNMLEIFLILLIPFSLPRTFGKMVEDVRQGRAILAAMVVLFTVNLFAMAAAE FSGHGTAARLAGAAMEGKEQRFGLAQSVLFANSTTMTSTGAVDSMHDSFTAIGGMFTLLN MMLGEISPGGVGSGLYGMLVIAVIAVFIAGLLVGRTPEYLGKKIGPREMKLSALYILVMP TLVLCGVALSLAVPGLRSSVNTSISNPGEHGLSELVYAFTSAANNNGSAFAGLDASTNWL CAALGVAMLLGRFVPIILILALSGALVEREPVPVTAGTLPTHNALFTTLIVFTAILVTAL VFFPVLTLGPLAEGLI >gi|302034494|gb|GL383257.1| GENE 223 233110 - 235224 1829 704 aa, chain + ## HITS:1 COG:MT1059 KEGG:ns NR:ns ## COG: MT1059 COG2216 # Protein_GI_number: 15840460 # Func_class: P Inorganic ion transport and metabolism # Function: High-affinity K+ transport system, ATPase chain B # Organism: Mycobacterium tuberculosis CDC1551 # 18 698 34 703 709 739 64.0 0 MTVIPSNSRSRGLTGAQVRQALPGAIRKLDPRSQWRNPVMFLVWIGAVLTTIIAGLELLT GVTDGGVSVGFSTAIAVWLWLTVIFANLAESIAEGRGKAQAETLRKTRTATSAIRVDGWD ERNDPSAEHTTTTEVVSSELRYGDVVVVAAGQTIPGDGDIVWGIASVDESAITGESAPVV RESGGDRSAVTGGTTVLSDRIVVKITSKPGQSFVDRMITLVEGSGRQKTPNEIALNILLA SLSIVFVLVTLTLNPIASLAARPVSVTVLVALLVCLVPTTIGALLSAIGIAGMDRLVQHN VLAMSGRAVEAAGDVTTLLLDKTGTITYGNRRASEFIPMSDVSDEEIRDAAARSSLADPT PEGTSIVDLAREQGFVPDACGEQGKVVPFTAQTRMSGIDLPDGTKIRKGAGSAVRAWLTE SHINMDIDTRVHMDRRVDSVSQSGGTPLVVAVRTPDHSGKVLGVVYLKDIVKEGLTDRFA ELRRMGIRTVMVTGDNPLTAAAIAKEAGVDDFLAEATPEDKLAYIRKEQEGGRMVAMTGD GTNDAPALAQADVGVAMNTGTSAAKEAGNMVDLDSDPTKLISIVGIGKQLLITRGALTTF SIANDIAKYFAIIPAIFMATYPGLSALNIMGLHSPASAVLSAIIFNAIIIVILVPLALKG VAYKPAGASKILARNLRIYGLGGVVAPFIGIWLIDLIIRLIPGF >gi|302034494|gb|GL383257.1| GENE 224 235237 - 235842 467 201 aa, chain + ## HITS:1 COG:MT1060 KEGG:ns NR:ns ## COG: MT1060 COG2156 # Protein_GI_number: 15840461 # Func_class: P Inorganic ion transport and metabolism # Function: K+-transporting ATPase, c chain # Organism: Mycobacterium tuberculosis CDC1551 # 8 199 3 188 189 159 50.0 3e-39 MIISSRTRTALVGLRSMLLFTVIVGVVYTGLMTGLGQLVLYHQANGSQLTVNGKVVGSTL IGQSFTDKGGRPLPKYFQPRPSAAGDDGYDARSSGGSNMGPENPDLAKAIKERRSQVAAF NHVDADRVPADAVTASSSGLDPHISPEYADIQIARVAKARHLDKAVVRRIVDDNTTGRQL GFLGETKVNVVTLNAELDRQH >gi|302034494|gb|GL383257.1| GENE 225 235907 - 238375 1843 822 aa, chain + ## HITS:1 COG:MT1057 KEGG:ns NR:ns ## COG: MT1057 COG2205 # Protein_GI_number: 15840458 # Func_class: T Signal transduction mechanisms # Function: Osmosensitive K+ channel histidine kinase # Organism: Mycobacterium tuberculosis CDC1551 # 1 811 42 864 871 615 46.0 1e-176 MLLGAAPGVGKTYAMLDEGKHLRAGGSDVVIAVVETHGRAATAAMTEGMEVVPRHYVECR GIELPEMDLDEVLARHPDVALVDELAHTNAPGSRNEKRWQDVEELLEAGIDVISTVNIQH IESLNDVVEQITGVPQRETVPDTVLRRASQVEVVDLAPQALRDRLSSGKVYPAERIDAAL SNYFRLGNLTALRELALLWVADEVDHALADYRSEHGIDSRWEARERVVVALTGGREGETL LRRGARIAVRAGGGDLLAVHVTTEDGLRSPHPGELARQRGLVDKLGGSFHQLVGDDIPDT LIEFAKSVNATQLVIGASRRGKLSRLLTGHDVEADIIRASGAIDVHIVSHDAQAKALRLP RMGGSLSTRRRIAGFAVLAVFGPLLTWLLVSLRSPEALTTDVLAYELLAVVVALVGGAFP SLIAALASGFALDYFFTKPFYTVTVNEPLHLVALLLYLLTAALVSVVVDRAARKTRVARR AAAESGLLQSVAGLVLRGEDAVESLLSRATEAFGLSGARLMTDGKVVANWGITSDQVTEH RIDDHTVVEFHGPEPDASERRLMSVIAAQLGTALEQRQLEETAKAVEPLAATDRVRTALL SAVGHDLRRPLAAATAAVSGLRSEWSKLSDQDRADLLETADEALSQLANLVTDLLDVSRL QSGVLGVSVMPVDPAEVIMPALDELSLGPADVEIDLGSDVPEMVADPALLQRVVVNLLSN ALRYEPAGSRVRLAESSFANQVEIRVIDHGPGIPEDRRGDVMVPFQRLGDTDSSVGLGLG LALSKGFVEGMDGTLALEDTPGGGLTMVISLPQVGAEEASVQ >gi|302034494|gb|GL383257.1| GENE 226 238372 - 239055 624 227 aa, chain + ## HITS:1 COG:MT1056 KEGG:ns NR:ns ## COG: MT1056 COG0745 # Protein_GI_number: 15840457 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Mycobacterium tuberculosis CDC1551 # 3 222 4 223 226 243 53.0 2e-64 MRILIADDDPQFLRALRITLGARGYEVLLARDGQHALEMAIDHKPDIILLDLGMPRLDGV KVIEAVRGWSSAPILVISGRSGSAEKVEALDAGADDYVTKPFSMDELLARIRVLTRRIGQ DEVDEEPIVAFGSVWVDLAAHTVTRDGANVRLTPTEWRVLELLIRNEGRLVTRQTMLSQV WGSEHVTDTGYLRLYISQLRKKLEPEPSRPRYLITDAGMGYRVVLDP >gi|302034494|gb|GL383257.1| GENE 227 239077 - 239583 268 168 aa, chain + ## HITS:1 COG:no KEGG:PPA0120 NR:ns ## KEGG: PPA0120 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 168 7 174 174 317 97.0 1e-85 MPTRNVYVSDEDQNLFQEAAGLAGGFSPAVSEALREYVKRRKLMRGGAEQVEVDLRTDGI DHRVSFMGRRLVKVQRDHEQGCRIDTVYATAREQFAVVSKVRRVLPSWAEGKEDLWSHPE TWDKEFWTVGDRTLTVFANLDELRTADGELAERVDSALHVAPYEVLDI >gi|302034494|gb|GL383257.1| GENE 228 240211 - 240453 180 80 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313815552|gb|EFS53266.1| ## NR: gi|313815552|gb|EFS53266.1| hypothetical protein HMPREF9589_01695 [Propionibacterium acnes HL059PA1] hypothetical protein HMPREF9597_00651 [Propionibacterium acnes HL005PA4] hypothetical protein HMPREF9600_00236 [Propionibacterium acnes HL050PA3] hypothetical protein HMPREF9609_01771 [Propionibacterium acnes HL027PA1] hypothetical protein HMPREF9613_00514 [Propionibacterium acnes HL002PA1] hypothetical protein HMPREF9619_01853 [Propionibacterium acnes HL082PA2] hypothetical protein HMPREF9577_00495 [Propionibacterium acnes HL110PA3] hypothetical protein HMPREF9565_00892 [Propionibacterium acnes HL053PA2] hypothetical protein HMPREF9578_00984 [Propionibacterium acnes HL110PA4] hypothetical protein HMPREF9582_00552 [Propionibacterium acnes HL060PA1] hypothetical protein HMPREF9592_01171 [Propionibacterium acnes HL046PA1] hypothetical protein HMPREF9599_01704 [Propionibacterium acnes HL050PA2] putative serine protease [Propionibacterium acnes HL103PA1] putative serine protease [Propionibacterium acnes HL097PA1] hypothetical protein HMPREF9581_00557 [Propionibacterium acnes HL087PA3] hypothetical protein HMPREF9579_00631 [Propionibacterium acnes HL087PA1] hypothetical protein HMPREF9588_00741 [Propionibacterium acnes HL025PA2] # 1 80 1 80 80 135 100.0 8e-31 MRTPESSRASPWSWVVSTVLIPFTQSLAQLNMLSLLGGLVTIYASPALFVLRSGVIDNEN VVKGERRSSLAPHSLALRSY >gi|302034494|gb|GL383257.1| GENE 229 240981 - 241193 169 70 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|327334689|gb|EGE76400.1| ## NR: gi|327334689|gb|EGE76400.1| cytochrome c family protein [Propionibacterium acnes HL097PA1] # 1 70 1 70 70 116 98.0 6e-25 MRSETSSQPFCPVSAEQKQPAEPLGVVFVGAFGLLGQLLAVALLFVIPVIPVVYLFLDRE NQSQPAGFEQ >gi|302034494|gb|GL383257.1| GENE 230 241769 - 243142 840 457 aa, chain - ## HITS:1 COG:CC2578 KEGG:ns NR:ns ## COG: CC2578 COG0612 # Protein_GI_number: 16126816 # Func_class: R General function prediction only # Function: Predicted Zn-dependent peptidases # Organism: Caulobacter vibrioides # 13 450 482 919 927 103 24.0 5e-22 MKTCNERPLTSRPTVRPGSPWSFPQCLVETLPTGLTVVRVPMPGQRIVTMEIGLDAPLCT EPAGLEGLAGLVVRTADESTGPHPGAAFAEAMESIGASYDGSAGLAGSHVGVDVPVTRFD AAAELFVELLNTTSLVEEDIARQIDAARASLAQTSQRGSALAEMAAARALWPVGSRSSLP TIGTLSSVEKLNAAAAREFWAAHWTISDAVLVVAGDGVEDLDLSILEEWTASGSPSQVAP LQPRLDGPRVILVDRPDAVQADVRIQQATVGRSHPGWAALKVACGALGGTFGSRLNQVLR EDKGWSYGVGMSSRPLPDGGVATVAGSFRTEVGADAVAEALRILTSSDDLRADEVDAARD HSVGIAPLQYDTASAVAHQVAALVGAGLAPNWVDDHLAAVASARASAGEWSVNRAWRELL IPDSWRIGVCGRAEELAPALAERGLEAVVVSPAEVLS >gi|302034494|gb|GL383257.1| GENE 231 243142 - 244413 698 423 aa, chain - ## HITS:1 COG:XF0816 KEGG:ns NR:ns ## COG: XF0816 COG0612 # Protein_GI_number: 15837418 # Func_class: R General function prediction only # Function: Predicted Zn-dependent peptidases # Organism: Xylella fastidiosa 9a5c # 13 411 80 477 990 250 37.0 4e-66 MLGPMSEALQLHRATLDNGMRVVVNPDTTSPGVAVNMWYRVGSADEEPGHFGFAHLFEHL MFSGTTSGIISSEHLATIESVGGSANASTSFDRTNYFETVPAGALELALWLEAERLAHLA VTEANLATQREVVKEEKRQRYDNTPYGDLLDMLLDGRFGSEHPYGHPTIGSVPDLDAACL DDVTAFHSTWYRPDNAVLVISGCVEADEGLTLADKYLGAVPAATGDLPERIQGRVRHDNP RVVVTRPLPRTAVTRAWATPPITNPNNLTVAMATDILGSGMSSRLIRTLERERHLVDGVG MNDFGLARGTSAALVSAHLKPGVSEEELTGAVDEIITELAANGPSQAELERARAQVERSW LESLAVVDERADLLNMHESLLGDAALVNTHLDRIRAITADHIAEAARRWLSPHQASTVVH QEA >gi|302034494|gb|GL383257.1| GENE 232 244619 - 245038 290 139 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3138 NR:ns ## KEGG: HMPREF0675_3138 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 139 35 173 173 261 100.0 6e-69 MQTQRNVVSHALQRRHTLEALRSPQVDLSAPTACDADPMLVRAAMHHGEPLNHDCPVCES PRLALLRHAFGHQLGQYSGRIRTLDELEEMEHQFGEFHVYEVEVCPDCLWNHILVDYVLG DGRRRRPPRHQPTVEDIYG >gi|302034494|gb|GL383257.1| GENE 233 245031 - 247370 1642 779 aa, chain + ## HITS:1 COG:Rv0050 KEGG:ns NR:ns ## COG: Rv0050 COG0744 # Protein_GI_number: 15607192 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Mycobacterium tuberculosis H37Rv # 51 659 2 615 678 272 33.0 2e-72 MADHKPARASKRHAPATGSGAGRARRAAGRPSRHPRLGKFLRGLVIAILSLVLIAVVGVF VAYERTELPDPNRDFQTNTSFIYYRDGSRLGSFSVQNRQSIPYETMPKTLRDAVVSAENR TFWSDPGISVKGMTRAAWAIARGGEMQGGSTITQQYIKVLYLSQERTMGRKFKELLLAVK TGKEVSKKDILAGYLNTIYFGRGAYGVQAAARAFFYTDASKLTLSQSAVLAAVLNSPSNF DPSGGVGARERLLQRYRYVLDGMLEAGNITQAQHDEAYRQLPKFPKVPDYNRWAGTDGYL MKLVYDELIARGFSDQQIKGGGLKVTTTLDRKDEQAAVAAGQKYKKIAGRNAVPEGAKNL HPALASVDVSSGGVLALYGGDDYISNTRDWALTARPAASTFKTYAAIAGMRHGFSLRSRL EGNAFTPDGDSTEVHNENDRNYGTVSLRQAIAKSINTAFVDMVSRIKNGPRAVVQAATDA GLSQGTGWDLNNRIALGTAEVSPLAQAGGYATIANDGKRVTPHIVDKVVDQSGKVLYQAP TPSKQTIEADISHDVSYALQSVVEEGTGRIVAGFDHHVAGKTGTSGVGHGVTSAWFVAYT KQISTAVMFVAGDSGNENLDRYAREGATGFHGGDYPARTWLDYMQTAMKGIPNKSFAAPD WVNLSGKHYGSTNRPQVSVEDDSDRDRSNQDDPESLGGPYPTRTSASSPEPSSAPSREQS SEPSATRTASAHTHTSKPTQTSQPTHTSRPTHTSTHTSRPTSGETTRGGNQPSGRAQNG >gi|302034494|gb|GL383257.1| GENE 234 247380 - 248927 714 515 aa, chain + ## HITS:1 COG:Rv0051 KEGG:ns NR:ns ## COG: Rv0051 COG5650 # Protein_GI_number: 15607193 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Mycobacterium tuberculosis H37Rv # 212 503 216 525 560 105 30.0 2e-22 MTIPDPKDDAMAARRCAVAHPNDGSPGYTARRGLDVPRGSRVSQLGLDRRIGGRMGRHAW PRGVFFDPGPWAIMSAIVIWLLTIYRVTPCVQHNVAKVVDPYQRQCYSDIPTLYRSSGMG HGGSFFANPDIAQTPLVTVLMAFCRRVVWAFGTEVSPKATDQQVLDAANAYWGVAQIVLF VAFLAIAISVMLLGRGSDTNLPVGDKGRPTQARRRSWDVFWVVLCPAVYLAGLIDFSMVP VALATTSMLAWARRRPWLSGILMGLACAGSLQAAVVAFAVLVCCLRATRLPELGRYLLAG SLMLVVCHVIAACLGLHTWWAYLRSTFWSGTGLGTIWYVIQDSSGGIIPGIGWITGTLTV GGLLGLAWLLMTVPRRPRIAQVACVALLILFITNKVYSPQWILFLVPLAALARPDLRDWA VLMVGECFYSLAVWAHLGGLSLPGGSDADVVYWASIVLRLACEIWFAWGVLDDIRRPWND VVRVGYADDPTGGVLDHAPDPAPEPVEDSSAEVAR >gi|302034494|gb|GL383257.1| GENE 235 248924 - 250099 736 391 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3141 NR:ns ## KEGG: HMPREF0675_3141 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 391 1 391 391 619 97.0 1e-176 MTRTGRATARRFAPTADGRLVTQTWLGSRAILLVVAVVVMTGYHRTFSQVTGNWDVQHYM SIARNGYADPLEMAFFPGLPALLKGGSFLGIPMEVTGVLLGLIGSALAAWALFRIGGMLP ACLWLIAPATVFTMVGYTEAPFCAAAFWAWERARAGRWWAAALLAGLACTFRVSGLFLIG ALAVLAVLGDGDEGRPMSQAARRRRLINVVNRLSTLLVPTAVLVAFVVWLHRLTGSWTAW SQAQTNGWRRGFTTPAETLRHTLPATHADTWRSLYGAGASGVAIVFRLELVSVALGVLVF VYCLIRRRWASASWVGIQVVAFSIGYWYMSVNRATLLWFPLFVALAEVTRGPSKPPGLVL LWRGIMGIVIAIDLAVMVWWGWRFFTGGWAS >gi|302034494|gb|GL383257.1| GENE 236 250177 - 251433 564 418 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3142 NR:ns ## KEGG: HMPREF0675_3142 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 418 28 445 445 634 97.0 1e-180 MVVETFADFRHGLTSPPWIVSSYLIVDVLIILACGSALWLRRHDLGRAGRWMLGGALGFM VWAIVSATFCPLPNLGPEPVARLLLVMAPVTAVATLLAGLSVAAGLTIRSSGRMVIERLW WPAAAMTCASYLQWPRAMKVHGSTRLATGMGGSAVLHVALLLACGVLVAAAVAGCRRVVS GILATGALVAVILTGSRAGLACATLFVLGCAIGSVMWRRSRVVRRAGHRRMVWGGLVALA VVVIGMVIVVPGLRRMLNPSDPMRSRTLRTGIQVWSSDLNHVFFGLGSGRLWPWYLYDCH ARQEPWRELMTTQWGPTLSSAHSTVLAVLVELGLLGFVLLLPVLLGPVVELVRRLFDGTG SPAGVVLRWAVVATLPAFLVDTYLVKNFGVSMWWWVVTLSSVAWTDQRPPSTSRQNSG >gi|302034494|gb|GL383257.1| GENE 237 251394 - 252656 635 420 aa, chain - ## HITS:1 COG:SA0125 KEGG:ns NR:ns ## COG: SA0125 COG0438 # Protein_GI_number: 15925834 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Staphylococcus aureus N315 # 257 361 231 330 388 74 38.0 4e-13 MAHRESTLILLTNTYPLSRGEEFLENEIDHVGRAFDRVVIIPIQAGPADVQTRAIPSNAQ VMHIARSSPRGLDRALVAVKGLVRLPPSGVDWAATRRQPRLLVSDAHFEGRAQTALNGIL AKLPSLRLTPESHVTIYSFWLHITARTATLLADQLRAQGVTMDRVISRAHRYDLYPSASP RHHIPERRLLLQSLDGICPVSEQGTRELRTTWPQYAGKIHTRYLGTSDPGPTAHCRRDPF TIVSCAHLVPVKRMIRMAAILARVRANGIDAHWTHLGDGPQMDTLREEVAVHRVTDAVTL LGHVDNTQVMATQRDLKPSVFVNLSSSEGLPVSMMEVASLGIPIIATGVGGVGEIVSSDN GHLLPAEFTDAQASDALVQLARLSEDEYQHVCQASRQVWEAKFRASVVYPEFCREVLGGR >gi|302034494|gb|GL383257.1| GENE 238 252719 - 252964 100 81 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQRRTSRSAPVCGMGCPPIRRTIHHNGTRGLGLHQTCNSTRHHVETATHTQYPTTVAITF GNRRIEILDGTGSLHQPYCHT >gi|302034494|gb|GL383257.1| GENE 239 252924 - 254051 1038 375 aa, chain + ## HITS:1 COG:no KEGG:PPA0131 NR:ns ## KEGG: PPA0131 # Name: not_defined # Def: putative glycosyl transferase (EC:2.4.1.-) # Organism: P.acnes # Pathway: Fructose and mannose metabolism [PATH:pac00051] # 1 375 1 375 375 729 95.0 0 MPQTGADREVRRCIYHVPYPLDPNTTFGGQKRAVAMFKALTQWGEVWVVAGDAHQRRRLM QVVMNAIRAGTRFEFCYSESSTMPTTLTESHHLPTHPLEDFAFLTRLRRHGIPVGLFYRD VYWKFPLYGEGVPKAKQLVAQAMYRYDLLAYRQCLDVLFLPSLRMGEWVDVGGRVNKVAL PPGHDIDETPTATPSSPLSMFYVGGLGSLYDLRAFCEAVASVPEASLTICTRPKEWEQAH KDYEHLIGNNTKVVHANGKKELEPYFAAANVAVLAMAPHEYRDFAAPLKLFEYIGNGKPI IATEDTFVGDVVTRDELGWTVKASVVEFAALLEQLTQHPERVDAARDRVMAARDQHTWAA RVEELVAALAAVDQR >gi|302034494|gb|GL383257.1| GENE 240 254048 - 255370 933 440 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3145 NR:ns ## KEGG: HMPREF0675_3145 # Name: not_defined # Def: O-antigen polymerase # Organism: P.acnes_SK137 # Pathway: not_defined # 1 440 1 440 440 714 95.0 0 MSVAERTAARPLDRQGMASRATSGVWLGAVAAVLVMRLPMGFLLFLIVPWVILAVQTRFA SSLSVTPLVAVEVCCMVASGMAVALFHPGLLADTGNSAFIMLAVIGVTLVVFRSAEPGRT ARQVLSGLYWGAILVWLIGMGEIVTGVKLLPLLYPRANTLGAVSKNRWVVTATYPNYNDY GVVMAMLFTAVLARLWFNPRRGAIRLGRLFVLATCLVMILIGGSRGALFGCICAVVLLFV LNVRRLHTAAMGVRAFVWGGALVIVLGTGLWMSPYVQDHSTAERGTIMANALSMTLSSPA ALLLGYGSLSEYQARASALYGHVLMDPHNLLLEIVLRYGAIAMILFVICWLWILVRGFLP RRPVADWRAAFGLTVVMLFPVLGVVPSSTLRYHVTWLYLVAASCITAETVAANGAGRPTL GMVRDAVTQLERSAGSTGAA >gi|302034494|gb|GL383257.1| GENE 241 255344 - 256120 658 258 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3146 NR:ns ## KEGG: HMPREF0675_3146 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 248 1 248 258 421 96.0 1e-116 MSSLPSEPTVAQSGSSAIEREATTDSSNQPPRPRDPGQPIDLLGFLKGLGHHWLAGLITF IVAAGLLVGYSLLMAPKNTVGTVAAHAHVMVTLPEPRTEAQATVESATVGQIMSNYVALT TPDPIVNTAVKYLHDGTTADDLKAGTSVYWGGGGTVIAVYAMGTNQNQAIERANAYARAF AEKANDLVPSSLAGLPQPKLTIIQPAFPSDPNPNAPATNKNSTKLSSPMVGVAAGLILGL VVMGVLEYRSSRRSRTSR >gi|302034494|gb|GL383257.1| GENE 242 256122 - 256346 161 74 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|315109979|gb|EFT81955.1| ## NR: gi|315109979|gb|EFT81955.1| hypothetical protein HMPREF9602_01099 [Propionibacterium acnes HL030PA2] # 18 74 1 57 57 108 100.0 1e-22 MVTPSSKSAVSMIRGSPMWDAFHAGYIKASLLVLARQARRPCTATPKIRRGGPPSNQFNA RVSPVCLAELCSMH >gi|302034494|gb|GL383257.1| GENE 243 256294 - 256911 612 205 aa, chain + ## HITS:1 COG:PAB0773 KEGG:ns NR:ns ## COG: PAB0773 COG0110 # Protein_GI_number: 14521366 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Pyrococcus abyssi # 9 177 12 173 205 146 46.0 2e-35 MGEPRIIDTADLDDGVTIGDGSSIWHLSQVRSEAVLGQNVVVGRGAYIGEGVHVGDNCKI QNYALVYEPAKLEDGVFIGPAVVLTNDHFPRAINPDGSLKSADDWEQVGVTCKRGCSVGA RSVCIAPVTIGEWATVAAGSVVTKDVPAYALVAGVPARRIKWVGRSGFPLDPDGENKWID SRTGDRFVEDPATDTLTLVSEGEQA >gi|302034494|gb|GL383257.1| GENE 244 256995 - 258107 1210 370 aa, chain + ## HITS:1 COG:PAB0774 KEGG:ns NR:ns ## COG: PAB0774 COG0399 # Protein_GI_number: 14521367 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis # Organism: Pyrococcus abyssi # 6 359 2 357 366 315 48.0 1e-85 MTAQFIPPAKPILGDDERKAVDEVIASGMVAQGPQVHAFEDEFSSQVVDGVHCVAVNSGT SALHIGLLASGIGEGDEVIVPSFTFAATGNSVALSGAKPVFADVDPVTFTLDPASIEASI TDKTAAIMPVHLYGLPANMAEIVAIATKHGLKIFEDCAQAHAASIDGKHVGTFGIFGAFS FYPTKNMTSGEGGMITTSDPEIARKAAMLRNQGMEKRYANEYVGLNNRMTDIHASIGRVQ LTKLAGWTKTRQENAAFLSSNITEAITPAVPEGYVHVYHQYTIRLEGATGEERDRFVTAL KEEHQVGSGVYYPIPNHRLPSLAPYAPGLELPNTEKVAAECVSLPVHPSLSQADRERIVA AVNTCAKAGA >gi|302034494|gb|GL383257.1| GENE 245 258107 - 259099 1032 330 aa, chain + ## HITS:1 COG:MK0248 KEGG:ns NR:ns ## COG: MK0248 COG0673 # Protein_GI_number: 20093688 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Methanopyrus kandleri AV19 # 4 320 3 304 317 171 34.0 3e-42 MANLRAGMVGIGSMGKNHVRNLRAIDGVDLVAIADASGKDPFGVAGDLPVLPDVDAVIET GIDYCVVAAPTKFHEEIGLKLAEAGVHALIEKPLAYDTAAATRLAEAFESKGLVGAVGHI ERYNPALQSLRKRLENGDLGDLYQVATRRQGPFPARIADVGVVKDLASHDIDLTAWVTQR EFELVAARTMFKAGRDYEDMVSATCQLSGGLMSNHLVNWLTPTKERRTFVTGEKGMFVAD TLTADLTFYSNAKVATVWDDIANFRGVAEGDVTRFAIPKPEPLRTEHENFRDAVLGKESD IVTMTQGATVVQVCEAMITSAATGEFVKIS >gi|302034494|gb|GL383257.1| GENE 246 259201 - 260583 579 460 aa, chain + ## HITS:1 COG:no KEGG:PPA0137 NR:ns ## KEGG: PPA0137 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 460 1 460 460 837 98.0 0 MTPIFRLHDSPDGSSAVTLLRSVAPIEWFSGAAEVIVACLFVTCTFVTVAQPVFDNGACQ LMLPLFAVAALVLEALCIVRDVRGVPSPREWSRSLIIVTCSFVALLVWGAVSIPFHEHLI YDDSMGVTRDLPLYALVMPLAEATVTLLVAIFACRMIAVGNLEGALWRLSMLMAIANPID LVREYVEGNTTGWRVATRLGGAAICHVLLILALAVAVDAVIRHRHRILSSVAAVSHLACL AASGSRAGTISLALFVIGLVFFGRSYRTRSRKQRTVIAMLGLLAAGVAIWLVSTVRSGSL VDPARARTWALAGRVVVDSPSHFLVGTGYGTIWPWFAVESTFMPESSHGMRRTLYGYSLP HAHSLIVQVVGELGVIGLALILVCLGTVIAVCVKGIRGGYPLLSLGVLATMPAFLMDTYL IKNFPVALFWWIFTLALCRLVTTGDADVEGDSGYREEKYA >gi|302034494|gb|GL383257.1| GENE 247 260554 - 260865 87 103 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313814073|gb|EFS51787.1| ## NR: gi|313814073|gb|EFS51787.1| hypothetical protein HMPREF9587_00461 [Propionibacterium acnes HL025PA1] # 1 50 1 50 72 102 94.0 7e-21 MLRPKTSCFGGGGDAFRVDIKRFEGHFPFLSDVMRHHEVLQDNGSELPPGDDRPVPRQWC LCSSHRDSVVTSVNNDEDRLVRKYYSRATKSYLFSGVLLLAVA >gi|302034494|gb|GL383257.1| GENE 248 260788 - 262365 1562 525 aa, chain + ## HITS:1 COG:lin0564 KEGG:ns NR:ns ## COG: lin0564 COG3104 # Protein_GI_number: 16799639 # Func_class: E Amino acid transport and metabolism # Function: Dipeptide/tripeptide permease # Organism: Listeria innocua # 32 516 3 491 492 308 37.0 2e-83 MSLEPLDVDAEGVAAATKARGFRPKHLVTGPSRDDKSFLGHPGGLPWMLQVEMWERFSWY GMRAILVYFITDTLAHGGLGLPINAGQVVMASYGAAVLLMTIPGGIFADRILGPWMSTLC GGLIIMTGHVILAIPQVVTSWIGLICIAIGTGFIKPNLSTVVGGLYDDGDPRRDQGFLYF YMSINIGSLFAPIVTGLLKDHYGYHVGFIAAAIGMALGLIAFFHGRSKLREFAFDIPNPL APGEGRRMVLRALGIAVVGAVLAIGFKALLGEWTSAIAYALFAFASVTALSYFLTMFRSP KVSDRERGHLWAFVPLWVGQVLFTMIFEQAAGKMATFAKDNTDGHIVGSWSVEPEQYQTI NPAAVLILAGLLGMWFRRREGKFPNTPQKFAISVFIIGITALIMGFGFRSWPGGNRLAPW WLLAVVFVIQTVAELFMNPIGLSTATKLAPKKFASQNMTLWLLASACGQGLASVTIERTK NLGDVVFYYSLGIVTILVAVVLFVIAPWTQAKMKDVDSVAEEGDV >gi|302034494|gb|GL383257.1| GENE 249 262609 - 263793 938 394 aa, chain + ## HITS:1 COG:Rv0688 KEGG:ns NR:ns ## COG: Rv0688 COG0446 # Protein_GI_number: 15607828 # Func_class: R General function prediction only # Function: Uncharacterized NAD(FAD)-dependent dehydrogenases # Organism: Mycobacterium tuberculosis H37Rv # 15 360 19 369 406 171 35.0 2e-42 MNPILGADMTTYQYLIVGGGMAADSAARGIRDIDKKGSIAILSADVDAPYPRPALSKKLW TDPEFTWDQVDLATVADTGAELRLGTEVLSIDRDDKTVLTASGQVFGYQKLLLVTGLTPS RIDDDGDAVLYFRSARDYQKLRALAQPGHQFVVVGGGYIGAELAAGLVQQGCEVTLVTLD PTLGGSQFPAQIASEYQKLFADAGVHLVTGKRVCSVRKHEVAEVTLDDGTILQADDVIAG LGASPVTKLAEEAGLTVNDGVVVDEQLRTNDPAIWAAGDIANYPDPVLGRTRVEHVDNAT AMGKAAGRIMAGSKDSYTHTPMMYSQVFGVRWEAVGTLDSSLATTSVEAGDGQVVYYLSD GKPVGVLLWNLPGRTDKAVTVLADPPEDLSTAIS >gi|302034494|gb|GL383257.1| GENE 250 263809 - 264609 864 266 aa, chain + ## HITS:1 COG:mll1036 KEGG:ns NR:ns ## COG: mll1036 COG1028 # Protein_GI_number: 13471147 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Mesorhizobium loti # 4 266 15 268 268 134 31.0 3e-31 MDLGLNGRTALITGADSGIGWHTAKLLLAEGANVAITDLDSDELTQAAQALDVADDRLVA LPADVTDADSLAKLHQQVKDALGPIDILVQSAGVTGAQGKFHEIDEEGWRSTLDIDLMGP VRVLREFLDDLRTGGWGRVVLLASEDGVQPYDDEIPYCTAKAGVLALAKGLSRTYAREGL LVNAVSPAFIHTPMTDAMMNKRSKELGVSFDEAIESFLDQERPYMELKRRGEPEEVAAVI AFLCSDKASFVNGSNYRVDSGSVATF >gi|302034494|gb|GL383257.1| GENE 251 264673 - 264930 270 85 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3154 NR:ns ## KEGG: HMPREF0675_3154 # Name: not_defined # Def: phosphocarrier, HPr family # Organism: P.acnes_SK137 # Pathway: not_defined # 1 85 1 85 85 110 98.0 3e-23 MASKTVKVGSSVGLHARPAAVISQEAAKLSSTVTLATEGGEPIDAKSVLLIMTLGASAGD PVTVAGDNEDDVNTIADLVASNLDA >gi|302034494|gb|GL383257.1| GENE 252 264966 - 266978 1972 670 aa, chain - ## HITS:1 COG:Cgl1891_3 KEGG:ns NR:ns ## COG: Cgl1891_3 COG1299 # Protein_GI_number: 19553141 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, fructose-specific IIC component # Organism: Corynebacterium glutamicum # 312 669 1 364 378 345 57.0 2e-94 MSTPLITPELVSLDANLGSTKTEVITSVAGLIAAAGRADADGLAHDTLDRESKSPTGMPG GFAIPHCRSAAVSQVSLGFARLSPAVDFNGPDGPADLIFMIAASEDGGADHMKLLTKLAR ALVNPEFVEQLRQAPDAQTVVDLIGGVVEPKEEASTSSATALPAPGHAAVTNTASDTPRI VAITACPTGIAHTYMAADYLRAAGKKLGVDVKVEPQGSTATEPLSTADIEGADAVIFATD VGVKGRERFAGKPVIESGVKRAVDEPEKMVSEAVAASKDPHAHRVPAGHGEQQEPEQAGS HIGWGKRIQQALMTGVSYMIPFVAAGGLLIALGFLFGGYEIAKDGMDIALHNTFNNLPTP TAHALGGSATMTYIGAVLFAVGQAAFGFLLPALAGYIGFGLADRPGIAPGFVAGAVAGVT GAGFIGAIIGGLLGGFVAYWFTRLNPPRWLRGLMPVVIIPLVGSLVAGGLMYVVLGRPLA ALTNALNNWLGGMSGASAVILGIVLGLMMCSDLGGPINKAAYLFATTNLAVTNVGSLKVM AAVMAAGMVPPLAMALSTTLRPKLYQPAERENGTAAWLLGASFISEGAIPFAAADPLRVI PSMMVGGATTGALSMALGAASKAPHGGIFVFFAIDRVWAFILAIVVGTLVAALLVTALKA SARRKAAAAA >gi|302034494|gb|GL383257.1| GENE 253 266988 - 267962 440 324 aa, chain - ## HITS:1 COG:Cgl1890 KEGG:ns NR:ns ## COG: Cgl1890 COG1105 # Protein_GI_number: 19553140 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) # Organism: Corynebacterium glutamicum # 9 324 1 323 330 237 45.0 2e-62 MAKAEGVHVIVTVTLNPSIDRTAPIAGPLRRGQVNRLGSSTEVAAGKGVNISRVLRGAGI ETCAVVPAGAKGRLTLGLNHDDIPHQVVPVAAAVRTNLTITEPDGTTTKINEPGADLSPE ELTAVEEAIVEKSSGAQWVVLSGSLPPGVPTHWYATMTDRLHEVGVKVAVDTSDQPLQEL AVRLPDCAPDLVKPNSVELGQLCGIDGGSLESAATRGQFDDVVVAARGLHGIAEVIVTLG GTGALLITEHDAWHARPEPVKVKSTVGAGDSSLAGFLLARTRGDQPENCLRAAVAWGTAA AALPGSTMPTPSQADAIHVSLTHL >gi|302034494|gb|GL383257.1| GENE 254 267935 - 268153 151 72 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|314982717|gb|EFT26809.1| ## NR: gi|314982717|gb|EFT26809.1| conserved domain protein [Propionibacterium acnes HL110PA3] # 1 72 2 73 73 119 98.0 1e-25 MIASATIAHGSTPRRNPDCHIDVWTTYASPRSEKPTQQMSVLVCLRTRVSHIPTLMVLSG PRNRWPKPKEST >gi|302034494|gb|GL383257.1| GENE 255 268267 - 269028 537 253 aa, chain - ## HITS:1 COG:Cgl1885 KEGG:ns NR:ns ## COG: Cgl1885 COG1349 # Protein_GI_number: 19553135 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Corynebacterium glutamicum # 1 253 1 258 259 174 41.0 2e-43 MYPAERHKWLIDTARETGRVSVAEASTALGVVPETIRRDLDQLCNQKMLRRVHGGAIPIE FDLLGDQPLATRDSSAVTQKEQIARAALSHLPSDKGSIILDAGSTTGRLASIMPSTRRFT VFTNSSPIASTVATHSNCDVHLLGGRLRPTTQATVGNVDAISRLRVDVAFMGTNGISPTH GLSTPDADEVATKAAMVASAHHVVVLADSRKMGAESTMRFAELGDVDVIITDSGVTPHQV DMLHKAGVEIVIA >gi|302034494|gb|GL383257.1| GENE 256 269193 - 270491 1321 432 aa, chain + ## HITS:1 COG:PAB0776 KEGG:ns NR:ns ## COG: PAB0776 COG0677 # Protein_GI_number: 14521369 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetyl-D-mannosaminuronate dehydrogenase # Organism: Pyrococcus abyssi # 1 416 21 432 448 255 37.0 1e-67 MKIAVVAMGKIGLPLAVQFAEKGHDVIGVDVQQRVVDEINKGNEPFPGEAFLDEKLKKLV PAGKLTATTDYSQAIPGADAIVLVVPLFVNDETWEPDFGWMENATKSLAEHLTPGTLISY ETTLPVGTTRNRWKPMIEEISGLSEGKDFHLVFSPERVLTGRVFADLRRYPKLVGGLNDE GTANGIDFYQQVLDFDDRDDLPRANGVWDMGTAEAAEMAKLAETTYRDVNIGLANQFGKY AAANGIDVYKVIDACNSQPYSHIHRPGIAVGGHCIPVYPRLYLWTDPDATIVRTAREANM TMPQYCVDQAASVLGDLSGKKIVVLGASYRGKVKETAFSGVFPTVDILAKAGADVSVHDP MFTDEELGKFGFKAYHIGDPVDGALLQADHPEYAELTPADLPGIKVLVDGRHVVDPAVWG DVEVIVVGDGEA >gi|302034494|gb|GL383257.1| GENE 257 270472 - 271734 349 420 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3160 NR:ns ## KEGG: HMPREF0675_3160 # Name: not_defined # Def: O-antigen polymerase # Organism: P.acnes_SK137 # Pathway: not_defined # 2 420 1 419 419 632 99.0 1e-180 MVTGRPEYSGSFLDKIVEGLLVLLPPAALLGPWAGSGRVFGYRILVVLLVGCAVTGWIYP IWVRRFSRAACAIVVVAVAWAVTGVVGAMRLGPRRDLSSLMGAGLALAGAWSVARLISDR HIRRERALRDVAIGWAVAVWVGAPLAVWEILTARHLGTYADGAWRNHPGLYRQPATWLTN PNLYAVFLAVGSVWVGVVGVRSATRWVRIAAIATAVTGLGLLLATDSRIVYAALLLAVMV RLWAVRRWRWVLPGVVMAVVVVIVVTHLHQAGLVWHRFIGVLIHHNDEGPSSFAVRTTLL AWGLALVMEYPLLGAGPGGYRANILAAPKRWFPHGKSDPHNGILEIASQYGLVVTALVAV CWCLAIGRCWRSRRWWGAALITAMPVLSLANSTYLVQSVNQLGWLVCVLAASSSRQETPQ >gi|302034494|gb|GL383257.1| GENE 258 271853 - 272968 461 371 aa, chain + ## HITS:1 COG:PAB0973 KEGG:ns NR:ns ## COG: PAB0973 COG0438 # Protein_GI_number: 14521660 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Pyrococcus abyssi # 127 358 151 389 390 96 30.0 6e-20 MRILIVGAASSIHTVRWVNGLVKRGHEVHLASVHPVGRHSIDSRVRIHLAPHGGKAKYVV NAGWLRSVAAGVQPDIVNVHYATGYGLLARLAHIDAPTLLSVWGSDVYDSPRANPLMRHM VRSNLVSATRIASTSHCMARVTRDLVNKPISITPFGVDTEILTPPDRRRDANDGDGVVCI GTIKALHSKYGIGELIRAFSRVHDERPNTVLRIWGGGPDENPLKVLARRLVPDGSVEFRG AIDHSEVRDALGSLDIFAALSTLDSESFGVAIIEAGACGLPAVVSDADGPAEVVEDGVTG LIVPRGDVIASATALMQLVDDVELRRRMGGAGRHHVVETYSWERSLDLMELAYRDTIDDA ARQHCSGRHGG >gi|302034494|gb|GL383257.1| GENE 259 273066 - 274139 1075 357 aa, chain + ## HITS:1 COG:PA3148 KEGG:ns NR:ns ## COG: PA3148 COG0381 # Protein_GI_number: 15598344 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine 2-epimerase # Organism: Pseudomonas aeruginosa # 1 350 1 353 354 301 45.0 2e-81 MRVVSIVGARPQFVKLAPVAKAFAAEGIDHKIIHTGQHYDVNMSDSFFAELGIPNPDLHL GVGGGSHGVMTGRMLEQLDPVLEDMDPDWVLVYGDTNSTIAGTLSAVKMHLPVAHLEAGL RSFNRRMPEEHNRVLTDHAADLCLAPTEVAMGHLADEGLASRAVLVGDVMTDVCLQVRDS VLANPRPVPGVEVGEEYVMATIHRADNTDDPKRLVHILDALGSLDRKVILPVHPRLRARA ESDGFTVARGNLTTIDPLAYPDMVNAVTNAAGVITDSGGLQKEAFLLGTICTTVRTETEW VETVENGWNVLDPDAEHLGEYATRPHPEGDPGYPYGDGKAARNVATVLLKAGERDRS >gi|302034494|gb|GL383257.1| GENE 260 274139 - 275260 684 373 aa, chain + ## HITS:1 COG:PA3149 KEGG:ns NR:ns ## COG: PA3149 COG0438 # Protein_GI_number: 15598345 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Pseudomonas aeruginosa # 7 371 1 367 373 187 32.0 2e-47 MANSSRLGRVVSLSTVHHGHDNRVFNKEAKALVAAGHDYHLVISADRDGIDQGVPVVALH REEGRVRRLVVSQREAWRHLQALQPEVLHIHDPELIPLALVWRWRHHCKVIYDAHEDLIG QVDTKPYLGAVTRPLAKMAARGLVGLAERSADAVVAATPTVGERFRRAAVTVVRNYPWLG NYTVPPKPVPGQLVYVGDLSEERKLSFMIEVTRAVRKQVPQAHLVLAGRVLPRCQETVEH AVAEGFVEHLGLVAPTEVPQVLASAQVGLVFLKPLPNYVASLPTKLFEYMASRVPFAASD FPAWREMFDGYGAGIFVDTEDAAATADALSELLADPQRCREMGCAGRRAVESGLNFESQA EALIDLVAGLLEG >gi|302034494|gb|GL383257.1| GENE 261 275483 - 276430 364 315 aa, chain + ## HITS:1 COG:no KEGG:PPA0150 NR:ns ## KEGG: PPA0150 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 315 27 341 341 599 99.0 1e-170 MRNLGERLDRRGVARIYRHSYVRGQADRAVARGEAVRILPGVVAASAVARDPRIIIRALL LWHRDIVLVGKAALIMLGMKAPGTTRPMDFYGVKDVEAFSTTRCLTRPGIRVRRWHIPHW FITEREQIRIATAEVSVLILAIQGEWGWVCEALRQRVVTPESCRQARKSLTGRYPKTKVD AALADICLAAWSIPELEMGRVLRATGITGHKPNHKVRVGDRYYYLDRAFEAEKVALEIDG RSVHGTIDGFEATMMRSAHLDRHGWKVLHVTPIMFREDPRFVLDWLASHLHRRHRPKTMF TEFALRRIMSGAAPA >gi|302034494|gb|GL383257.1| GENE 262 276774 - 277061 320 95 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3165 NR:ns ## KEGG: HMPREF0675_3165 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 95 4 98 98 144 98.0 1e-33 MSKPEVNPEEINKGTLVAVAVAAVAVIGIALIAMRKGPKDRKTGSQDPSLFENLATRKPS GGRVTQRRDPRADGHATPMGGTGRVSTAPDFYSYK >gi|302034494|gb|GL383257.1| GENE 263 277067 - 278449 1212 460 aa, chain - ## HITS:1 COG:all2964 KEGG:ns NR:ns ## COG: all2964 COG1252 # Protein_GI_number: 17230456 # Func_class: C Energy production and conversion # Function: NADH dehydrogenase, FAD-containing subunit # Organism: Nostoc sp. PCC 7120 # 27 428 6 421 442 224 35.0 4e-58 MGINNLLSDIGLPGLGCKPVLTDSKPRVVIVGAGFGGLAAAEKTAEAGCDVTLIDRNPYT TFQPLLYQVATGGLNPGDVTYRLRSFAANNGPHTHFRRACVTGIDTENRIVEVDNGDPIS YDYLVLSQGVGANFFGTPGAAENSYTIYTRASSLRARDAIFTYLEDLDTQRDKTFDVIIV GGGPTGVEMAGTLAEMKSIGIPAIFPDVSTDRVHVTLVEMANHLLMPFDPALRHYTRRQL QKRGVDVRTNTAIAEVREDSVLLKDGQTLPADMVIWAAGVGAHKSVTNWGFEQGRGGRIA TDGTLLVEGQDRIFAVGDGAINTEDPKPQLAQPAIQGGECVARQIVHLELGEPLEKFEYN DKGTMATIGRNSAVVQLSEKLKFTGIGAWLTWVTLHIFTLLGGRNRLQAMINLGARYIAF HREAGAIVGDVLSEEGKENMNKNALRDDDEKGAKPIDGKE >gi|302034494|gb|GL383257.1| GENE 264 278522 - 278863 167 113 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|289424513|ref|ZP_06426296.1| ## NR: gi|289424513|ref|ZP_06426296.1| hypothetical protein HMPREF1034_1804 [Propionibacterium acnes SK187] hypothetical protein HMPREF1034_1804 [Propionibacterium acnes SK187] # 57 113 1 57 57 106 96.0 7e-22 MHEVVYAVGQPVPGLQNTQLVDAVARLLMKLVCQGLPGILGMFDVPARLDPQVHFAVFVH QRLPLLTTNAVRRKLSEDPRTDRHVMSVRLRMEMWHGPSLSRWKRKCPFRASQ >gi|302034494|gb|GL383257.1| GENE 265 278702 - 279223 324 173 aa, chain + ## HITS:1 COG:no KEGG:PPA0154 NR:ns ## KEGG: PPA0154 # Name: not_defined # Def: MutT/NUDIX family protein # Organism: P.acnes # Pathway: not_defined # 1 173 43 215 215 308 98.0 8e-83 MNLWIQPGGHVEHTENPWQALAHELHEETGYSIDQLSVLQPWDRLPDGIHDLMHPTPVLL NTHSPYPGHFHSDIVMAMVAHGDPAEKPRPGESQELQWVSPDEFATLPGAEPDAVMIMTM IIERVADSWLAIPATSWSLADAPAEAMTDRSVAEATAPDPLDDRETLGWGTAQ >gi|302034494|gb|GL383257.1| GENE 266 279205 - 281721 897 838 aa, chain + ## HITS:1 COG:Cgl0142 KEGG:ns NR:ns ## COG: Cgl0142 COG1643 # Protein_GI_number: 19551392 # Func_class: L Replication, recombination and repair # Function: HrpA-like helicases # Organism: Corynebacterium glutamicum # 85 831 13 713 717 454 41.0 1e-127 MGDRSVTRNCGPDLARVGAGLPVAAYRDEITTALHGGRAVIVAPPGTGKTTFVPPLVASR CSGRVIVTQPRRVAARAAARRLAALTGTRPGEFASHTVHGESTTTRDTKVEFVTTGVLLR RLLSDPDLTGVDAVVLDEVHERHLDADLVVAMVCEVAQLRDDLTIVAMSATVDSSGWAAF LGGVEPAPVVEVASALHELEVEWAPAAGAAVESRGVSREFLGHLGTVTVDALDRHTEGSA LVFVPGAREVDHVVADLRSRLAGIDVVGLSGAMSAREQDHALSDPGNVRRVIVSTAVAES SLTVPGVRLVVDSGLSREPRLDRGRGMAGLVTVRESRASAVQRAGRAARLGPGVAVRCLR AQDWAGMNADPTPEVDHADLVASLLSLAVWGSPRGEGMALPTPLPQDRVAAAEEELRDLG AVDAEGRITVRGRHLATFPLDPRLARALTDGAAIVGSRRCAEIAAMLGLEDGQVDLVGQW RQLRSGRHPEAVMWRREADRLARLINDVPPTDITDDDAVATVVSLARPGWIARSRGEGSA SYLLACGTGVDLPRNCPPGLLGQPWLAVARTSRITSGALIRAAVPLSESAALESGEAMLT SDTTVTWDGGKVRGRRVLRLGAIELSSTPVRPDPVRARHVALEAVRSGGLDVASLTKNGE SLRRRLALAHRVFGDPWPDVSDEALLARAEEWLDLDALAAGRGSDATSGLRGLLGWRESA RLDEVVPETITVPSGSRIRIDYPEPGSDTSPVLAVKLQECFGWADGPTVCDGRERVVLHL LSPARRPLAVTDDLASFWASVYPAVRVENRGRYSKHPWPEDPMTATPTKRTNRALRGN >gi|302034494|gb|GL383257.1| GENE 267 282029 - 282658 707 209 aa, chain + ## HITS:1 COG:Cgl1054 KEGG:ns NR:ns ## COG: Cgl1054 COG4721 # Protein_GI_number: 19552304 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 10 193 16 201 201 84 36.0 1e-16 MTNDKLTVRYRTIDIVTPVMIAVAFGVIFLGYGAVYSLLKPATSVYLPIEGILSGIWFLP ALLAGLIVRKPGAALLSEVLAATVEAALGGPWGAGTLISGVVQALPMELCLLVVAYRKAG PKLALVAGALTGFAEAIYERISYYPMFRFGDTIVYFVFMIVSGALLGGLVAWGIVRGLAA AGALSPFAVSRELRGGKSPRSTTSSRNLS >gi|302034494|gb|GL383257.1| GENE 268 282655 - 284754 1174 699 aa, chain + ## HITS:1 COG:Cgl1055 KEGG:ns NR:ns ## COG: Cgl1055 COG1122 # Protein_GI_number: 19552305 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, ATPase component # Organism: Corynebacterium glutamicum # 34 447 21 445 446 200 32.0 8e-51 MTDVLAYADHVDEVSSRRAVPVDVEELTVGVPDRDEPILGPIDLHLAAGSRILVSGPSGA GKTTLLHAVGGLLEEESYDLTGRVNTWSGDVNVGLLQQEPIHSVVAATCGRDIAFGPENH RVPREDIWSIVEDSQRRARFTMPMDHSTTKMSGGQMQRLAIAGILATNPGLLLLDEPISM LDEESATAIRDEVARMAHDRTVLVVDHHPDQWRGVLDQVVELTDHGTLKKIWDFEDFLDS REATSLPPHTSIAGEVVASTSSLDAHRPQSDDVLLRGVTMSARRGHITVLSGPSGVGKST LLRLLAGLDVPASGELTLPDQTAWVPQNPENYLVARTAADELFASPMVPENADLRDLVRT FGLKPFLDSHPMTCSGGEKRRLAIAAAVAQLPDLLLLDEPTVGLDDDRGVSVLSAIRAAA DSGVAVVVSSHDRQVIAMADEVVDVASYRVPDPTPNERPGEKPAFLTTINPLVVFLIAIA GIFGSLFVRSPLVGAMGLIPAAVMAPMCSRRVKPLVVRTVPVLIAAVMLVWTTLLLHSGF TDPSAWSEATRQGLRILVFVLPGALASAAIDPTRLGDALAQQTHLPQRPVVASMAGVVRM GHLGDQWHIQSDVRNLRGLGPKRSLSSRITYLSSMTFAMVLYAMRSSEVLSRAMDSRGFA TATRRTYALESRWHARDLWGVVLAAFVVAVPALAAVLFG >gi|302034494|gb|GL383257.1| GENE 269 284767 - 285984 1293 405 aa, chain - ## HITS:1 COG:RSp1009 KEGG:ns NR:ns ## COG: RSp1009 COG0438 # Protein_GI_number: 17549230 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Ralstonia solanacearum # 25 358 9 357 417 141 32.0 3e-33 MPGRVSVRPNPGGKMPQRKVSVINHYAFPPGSGGITRNFDMFSRLRGWQPHFYAANINHT SGERMTVDDPRYTLVPIPEYKGNGVKRVLGWVAFAAGAGARALVRPADVIFASSPQILSP AVGMVVAALRRKPFVVEVRDLWPESLVSGGALKEGSALHKVLQGLEKTIYAHARQIVVVT KGWEDHFRELGINVDKVTVVPNGADLAEYEVKESREELRKEYGISGFTAVFSGTHANYVG LDLIVDAARRLPDVNFLLVGAGARKQWAIDEVAKLRLTNVTFHDQVPKSELVRILSACDV GLHTVSPQSVFDKGMSPNKLYDYMAAGLAVVSNAKVPIRDVISDDEVGACVDSTDLVAGI ERVRDADEATMKRWHERARELMANKYSLQASVDKLARVLEKALYR >gi|302034494|gb|GL383257.1| GENE 270 286035 - 286454 350 139 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3199 NR:ns ## KEGG: HMPREF0675_3199 # Name: not_defined # Def: DoxX protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 139 1 139 139 257 98.0 1e-67 MSRPSHFTAPSPSKRHPLRTLSRLGVGGLLAYAGVGHLTFVREEFQAQVPDWVPVDDDTV VWLSGTAEIILGAALLSGRHKKFWGRSAAAFFAAIFPGNVGQLVEHKDGFGLDDDRKRAI RLLFQPILVGLALEGTRED >gi|302034494|gb|GL383257.1| GENE 271 287021 - 288028 904 335 aa, chain - ## HITS:1 COG:sll0744 KEGG:ns NR:ns ## COG: sll0744 COG0167 # Protein_GI_number: 16331972 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotate dehydrogenase # Organism: Synechocystis # 3 327 2 327 343 281 44.0 2e-75 MSDLHTKYMGLTLKSPLVASAGPIQQKVDGVKALADAGVGAIVMYSLFEEQVRHEEARQA EIELEYMDSFAESLSFFPTVASNEGGITERYLAHLEASANAVDIPVIASLNGATNGGWVD TAKRMEGAGAAGIECNIYMVPGDLEQSAEEVEDRHVEIVQAVKDAVSVPVAVKLSPFFSA LGNMATRLDAAGADALVMFNRFLQPDINVETMQVEPGVWLSSPADARLPLTWIAALSGRI GASLAASSGVESAADVVKYLLAGADVVMTTSALVRHGTGYATELQKGLESYLPRKEVNLD TLRGMLAVPNDASTAEYERNGYVAALEKAKTTYGS >gi|302034494|gb|GL383257.1| GENE 272 288052 - 291666 3200 1204 aa, chain - ## HITS:1 COG:alr1911_1 KEGG:ns NR:ns ## COG: alr1911_1 COG0674 # Protein_GI_number: 17229403 # Func_class: C Energy production and conversion # Function: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit # Organism: Nostoc sp. PCC 7120 # 2 418 7 418 418 533 60.0 1e-151 MANSSDSRVRTIADGNTAAASVAYRCNELCSIYPITPSSPMAETADEWSAAGRKNIWGDI PTVMEMQSEGGAAGAIHGALQGGALSTTFTASQGLLLMIPNMYKIAGELTSTVFHVAARS LAAQGLSIFGDHQDVMACRQTGFAMLCSSTVQECHDLALISQAATMHSRVPFMHFFEGFR TSHELNVLEMLSDDDIRHFITDDLVHAHRERALSPAHPFIRGTAQNPDTHFQAREAANKY YEKVPSIVQSLMDEFAQVVGRQYHLVEYHGDPEATEVIVCMGSGARTIEHTIDHFNARGH KLGLVELHLFRPFPVAEVVKAIPETARTVAVLDRTKEPGSNGEPLFLDVLAALSEAYSRG TRNSMPIVSGGRYGISSKEFTPGMVAGIVAELELESPRPRFTIGIDDDVTGISLPWEPLD IEDPTTIRAVFYGMGSDGTVGANKNTIKILGSDPNTYAQGYFVYDSKKSGSKTTSHLRFG PKPIEAPYLVSQAGFIGIHAWGILKSMDVLTMAREGTTVLLNSPYAVDEVWDKLPDTMQR QVLDKHLDLWTIDALSVARKVGLRNRTNTILQTCFFAISGVLPKDEAIAKIKDSIQKTYG KKSQKIVEMNHAAVDASLEHLHQVKVPDQMTANHSLIPAVREDSPEFVKNVTARMIEGFG DLLPVSALPDDGTYPAGTTKYEQRTLSDVIATWEPNACIQCGNCAFVCPHGVIRSKYYPQ SQLEGAPESFQSAELNAAGLPESCYTLQVVPDQCTGCGLCVEACPAHPVGEPDRKAINLE EHLDKTVQRENVKFFETIPVNDRSRVDFATVRGTQFLEPLFEFSGACSGCGETPYVKLIT QLFGDRAEVANATGCSSIYGGNLPTTPWGKNASGRGPAWSNSLFEDNAEFGLGMRMAANV QTELARRRLQEVSSQLDPEFVEDLLHAPQLTEHDLQSQQHRVKELQTKLADMEQTPAVRD LMSVADHLLRRSVWIIGGDGWAYDIGSSGVDHVLASGRDVNVLVLDTEVYSNTGGQASKS TPLGAVAKFASAGKPTAKKDMALQAIAYGSVYVARVALGADPQQTLRAFREAEAYPGPSL IIAYSHCIAHGYDLRNGLDQQYKAVHCGHWPLMRYNPVLADEGRNPFLLDSPKPDETWRE YTKLELRYRMLQKAHPEEAERLLDLGQRQVERRYAEYAEMASRTAENFAVDARMSEFAAS SNRA >gi|302034494|gb|GL383257.1| GENE 273 291682 - 293469 1470 595 aa, chain - ## HITS:1 COG:PAB1214 KEGG:ns NR:ns ## COG: PAB1214 COG0493 # Protein_GI_number: 14521926 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Pyrococcus abyssi # 53 441 51 475 475 243 37.0 6e-64 MSAETMTSDTTDPNGYVIRENQDITARPDLARTTGRVTPTRTRRPVYLDMLPPCNAGCPA GENIQEWLRLIKAHEEEKAWRQLTADNPFPAIHGRVCYHPCEVACNRADLDGAVSIHSVE RYLGDLAIEKGWTFTRPTEPSGHRVLVIGAGPAGLSAAYHLAMLGHDVEIHDAGDKVGGM MRYGIPEYRLPREILDAEVARLTDLGIKIVLNHPVNDLMEEKAKGRFDAVFVAIGAHLSK RVDIPTVDASRMVDAVSFLHNVAAGEKPLIGRRVAVYGGGNTAMDAARVAKRLGAEESIV VYRRTAEQMPAHAEEREEAEREGVQMNWLRTITDVGDDLTVEVMELDEDGKPHGTGRYEK LEADTVILAVGQDADTSFLHKMPGMRFRNDVVDVNPSTLMTDVPGIFAGGDTVPSERTVT IGVGHGKRAARQIDLWLNRESGYPTAKNTTVGFNDLNLWYFGDHLRRHQPELDPTQRVGF DEVVGGLTDDQAHFEAGRCLSCGNCFECDGCYGSCPEDAIIKLGKGHRYEFNYDKCTGCA TCFDQCPVHAIEMIPEGTDPATVQGSGNPTPGWAVRPEPNPQRSASLKFTVDSEN >gi|302034494|gb|GL383257.1| GENE 274 293748 - 294065 227 105 aa, chain + ## HITS:1 COG:Cgl1190 KEGG:ns NR:ns ## COG: Cgl1190 COG0011 # Protein_GI_number: 19552440 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 1 102 17 116 117 101 53.0 3e-22 MIVAFSLVPSGGRASREDGGVADAVAAAVRVVRDSGLPNHTSSMFTEIEGSWDEVMDIVK RATEAVAQYGTRVSLVLKADIRPGRTGEMTAKLERLQGELDKQHN >gi|302034494|gb|GL383257.1| GENE 275 294087 - 294860 522 257 aa, chain - ## HITS:1 COG:Cgl2852 KEGG:ns NR:ns ## COG: Cgl2852 COG2186 # Protein_GI_number: 19554102 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Corynebacterium glutamicum # 37 250 9 223 231 94 34.0 2e-19 MTQTRDAGSSRPDPHAGHQASVTHSSTASKSGGFSVVMRHIDDEILAGRWVNGSRLPPER ELAASLSVSRGAVREAIRALEAQGILSSGTGRSNGTRVDARPSDAMGRILRLQLALDVVS FADLTETRIALEKAACAAAANVRAPVPLTRATDLLVQMHDAMQPDSFNALDTAFHVALAE AGDNRLMRDLTVAIREAVHLPILEAEHSLIGWEQWRDGLVCDHQEMLAAIENGDSERAAK VTEAHIRNTYNTLLIDR >gi|302034494|gb|GL383257.1| GENE 276 295243 - 296931 1778 562 aa, chain + ## HITS:1 COG:PA4770 KEGG:ns NR:ns ## COG: PA4770 COG1620 # Protein_GI_number: 15599964 # Func_class: C Energy production and conversion # Function: L-lactate permease # Organism: Pseudomonas aeruginosa # 4 548 1 548 562 297 36.0 3e-80 MVLLQTFTPSANPLGSQWLSALLAVLPVLAMLITLGALRWKAHLAGLFSWCVALLVAITA FRMPIGMAFSSSVQGFLYGLFPISWILLGAIWIYQVTVISGRFDDLRRTFFLISDDPRVL GILIAFCFGGLLEALAGFGAPVAIAAAMLIAIGFGKLRGAITALVANTVPVAFGAVGLPV LMAAKTGGLDVAMVAPVTARVCAVLCLVVPFLMLAIMDGRKGVRECWPFGLFVGVVFGVT KVIVGGTPVYNLTEIFAAVVTVALSLLFLKVWKPKGGREAAERIGIPIDPTVEIESVEAQ EVDTSDLTGSRIFMALVPYILVIVVFGIAAIPAVKDSFKAADVKMAWPGLSGLMTAGGEA AAHQAYTWQWLSQPGFLLAIVAILVGFIYRVPLADVTKELWINAKKMKFSMLTIGLVVAL AYVMGDSGQTLALGMFIAGAGAVYPFLAPILGWIGTYVTGSDTSANILFSGLQSSVGQQV GAGSYLGMESMRHLLVGAGASGGVVGKMISPQSLTIAATAIGLAGGESVILRKVFKFSII LLVLMCIIVGLMSTPVLGWMVP >gi|302034494|gb|GL383257.1| GENE 277 296986 - 297780 660 264 aa, chain + ## HITS:1 COG:DR1907 KEGG:ns NR:ns ## COG: DR1907 COG0247 # Protein_GI_number: 15806907 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Deinococcus radiodurans # 21 262 1 242 247 288 57.0 7e-78 MTTTTSPGARATSPGLPGAGMTVGLFITCINDVMFPQTGVAVTTLLERLGCKVEFPRKQT CCAQMTTNTGYFDEGIPTVRQYVRAFGDYDYIVAPSGSCVAAVRDQHPMLAEYAGDSGLA KEVEHTSQCTYDLPEFLIDILGVTDVGAYFPHRVTYHPSCHGKRLLNLGDRPYDLLRHVR GMTLVDLPMAEQCCGFGGTFCIKNPDMSAAMANDKARHVRETEAEYVVAGDNSCLMNIGG VLSRQNSGVKPIHIAEILANTEED >gi|302034494|gb|GL383257.1| GENE 278 297784 - 299325 1281 513 aa, chain + ## HITS:1 COG:DR1908 KEGG:ns NR:ns ## COG: DR1908 COG1139 # Protein_GI_number: 15807655 # Func_class: C Energy production and conversion # Function: Uncharacterized conserved protein containing a ferredoxin-like domain # Organism: Deinococcus radiodurans # 34 369 13 343 347 402 58.0 1e-112 MGTELRRVTYGNHGVARLTPAPDKPGTYMGMPKFSKAVKGELNLSVQRKNMRNATTTIRN KRAMRVSESPDWQDLRDAAESIKNRVGRHLDHYLVEAEKNLTANGVHVHWARDGEEANRI VAQIAKDKGVDEVVKIKSITSQETDLNEYLEEQGIAAWETDLAELIVQLGHDRPSHIVVP AIHRNRAEVREIFLHEMKNYGRPAPEDISENPPELANAARLHLREKFLRAEMAVSGGNFV LADTGSLVIVESEGNGRMCLTLPDTLVSIVGIEKVLPSFDDLEVFLKLLPRSATGERMNP YNSVWSGVTDGDGPQEQHVIFLDNGRTDVLADTLGREVLRCIRCASCINICPVYERAGGH AYGSVYPGPIGAVLNPQLRGVEHPVDRGLPYACSLCGACNEVCPVKIPFTDILLKLRNKV VKSEKADRIPQDYEVAGEMGLMKTASWAFSDHKHFEAIQVGSRGVGRVLRGKKMGPVPVP VPVAERWLKYRDVDAPPADTFRTWWKKNRQEQR >gi|302034494|gb|GL383257.1| GENE 279 299322 - 300002 657 226 aa, chain + ## HITS:1 COG:DR1909 KEGG:ns NR:ns ## COG: DR1909 COG1556 # Protein_GI_number: 15806908 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Deinococcus radiodurans # 1 223 1 211 212 163 44.0 2e-40 MTTISTDPVARTEILARIRRASTDITNSDPVADVPIEWEYGTGIDMDDVVGTFVEKVIDY KATVVRVKGADVPQAVVEGLRSTGAEHSAVVPVGLDKSWVEAIKTAGFDARLDDPQLSKK ELNDTDAVVTGAACGIADTGSIVLTHVEDQGRRAITLVPDRHVCVVKASQVVSDVPEAIQ IVKPAVHEGHPLTFISGGSATSDIELSRVDGVHGPRRLYVIVVDDR >gi|302034494|gb|GL383257.1| GENE 280 300070 - 300390 186 106 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3210 NR:ns ## KEGG: HMPREF0675_3210 # Name: not_defined # Def: ABC transporter, ATP-binding protein # Organism: P.acnes_SK137 # Pathway: not_defined # 13 95 4 86 252 151 95.0 1e-35 MRRSMQPGLFGCFRDVPVRSATMIIDDVTFSYRRHHEVLHGVTVELAPGRTVLLGPNGAG KSTLFSLCSGSRAPTSGRIGLAGVAEASSRTLRQRESELLLRAVAT >gi|302034494|gb|GL383257.1| GENE 281 300348 - 300545 212 65 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313764827|gb|EFS36191.1| ## NR: gi|313764827|gb|EFS36191.1| conserved domain protein [Propionibacterium acnes HL013PA1] conserved domain protein [Propionibacterium acnes HL025PA1] conserved domain protein [Propionibacterium acnes HL059PA1] conserved domain protein [Propionibacterium acnes HL063PA2] conserved domain protein [Propionibacterium acnes HL005PA4] conserved domain protein [Propionibacterium acnes HL050PA1] conserved domain protein [Propionibacterium acnes HL050PA3] conserved domain protein [Propionibacterium acnes HL067PA1] conserved domain protein [Propionibacterium acnes HL027PA1] conserved domain protein [Propionibacterium acnes HL002PA1] conserved domain protein [Propionibacterium acnes HL037PA1] conserved domain protein [Propionibacterium acnes HL078PA1] conserved domain protein [Propionibacterium acnes HL059PA2] conserved domain protein [Propionibacterium acnes HL046PA1] conserved domain protein [Propionibacterium acnes HL030PA2] putative membrane protein [Propionibacterium acnes HL097PA1] conserved domain protein [Propionibacterium acnes HL087PA3] conserved domain protein [Propionibacterium acnes HL083PA2] conserved domain protein [Propionibacterium acnes HL087PA1] conserved domain protein [Propionibacterium acnes HL025PA2] # 1 65 1 65 65 105 100.0 1e-21 MFQRSWRNAFLALVGWLVAGFIVVKITDALTHGTHWWLYIPFAVIGLASAVIHVATARSS SSDSR >gi|302034494|gb|GL383257.1| GENE 282 300565 - 301614 462 349 aa, chain - ## HITS:1 COG:no KEGG:Arch_1539 NR:ns ## KEGG: Arch_1539 # Name: not_defined # Def: hypothetical protein # Organism: A.haemolyticum # Pathway: not_defined # 275 349 19 89 89 97 66.0 7e-19 MRLNLESTQSLLNCDTDPVTFSAMASIRPSLQIPFACLTTVCLLATTTPAPAHSTTILSA DDSAALTRSAAASASVAPTTYREFFSDSSTTASTAQDTERTEVRASNSGNSITHFSNNES FSVSLPGSSSNVTRSSDSTVATLGDDARSDNFALAITTPAEGEATVHSILLTESAPQTFS YTFHNITRISSDGHGGADLFYADSNDELVQVGHVERAWARDAIGRPVPTHYEIHGSKLTQ VVDHRSGGYTYPIVADPSWSEIWSAIKHGGSKVASAAKWLGSKAGWVVGKTWSGVKVMAP KGLKAGKFLAKKVGPGAVVLCAAGAGWAWYRSDAHGWVRVGDAVSGCLF >gi|302034494|gb|GL383257.1| GENE 283 301700 - 303304 1405 534 aa, chain - ## HITS:1 COG:BS_cydD KEGG:ns NR:ns ## COG: BS_cydD COG4987 # Protein_GI_number: 16080924 # Func_class: C Energy production and conversion; O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components # Organism: Bacillus subtilis # 22 519 17 529 575 193 30.0 6e-49 MNARTTQLLKTLLRDVPRGRWLLVLSTLLAACASGASVALMGVSAWLLSRAAEMPPVLYL EAAAVGVRFFGISRGVFRYAERLVGHDLALRMQGALRMRVYDRLSRTTLLGRRRGDLLVR VTADVDAVLDMVVRVIVPACASSLVIIGTTVLLARFSLASAAVLLLSALLAAVVMPAITQ RLSRAADSSLVPLRGQLADRTRELAHCAPDLVAYGAQDAILADVLEVDSRLRTAEKRAAW GRGLGTAGQILAAGLAVVSALWIGGNAVADGRIGGRILAVLVLTPLALHEVFGAFTGAAQ THTRAMAALQRVAEVLDAPQVGVGDSPTAAASEEKPSLVIEELTVGWPGDQPVLSNVNLQ VAAGESVAIVGRSGIGKTTLAATIMGLIPPLAGTVTTTGRVRYLAQNAHVFATSISENVR IGCKEATEDEVLTALSRAGLAIPPRRVVTEDGSSLSGGEAQRLALARVLVNHGTPADPAT HDLLILDEPSEHLDVETSEALMSDLWATTGGAAKVVITHDPLVMARCDRVWEVG >gi|302034494|gb|GL383257.1| GENE 284 303301 - 304614 174 437 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 228 419 7 194 305 71 29 3e-11 MPSGTLISLMTTGLDALDGYYSKYLPQLVLAVIVPVVLATAIGLNDLTSVVIVVVTIPLI PVFMALIGWRTEAAVAKRFKVATRLANHFADLVAGLPTLQVFGRARAQLEGLRRTEAANR SETMRTLRISFLSSFVLELLANLSVALVAVTVGFRVAAGGMDLRTSLFILILAPEVFLPV RQVGVLFHDAADGMAAAEVSFGLIESGRPTAPKSDVEIASPREVPVVISGLTHTYEGTDR AAPDGLSLRIEPGSVVALVGHSGGGKTTALSCVLGFIDPDSGSILVGDRELIGADESVWQ SWRRQLAYVPQVPAMMAGTVAENIRLGCSDAPEAMLRDALDRCGAAAIPLNKRIDDDAEG LSAGERRRVALARALVRVEQAEAGLLVLDEPTAGLDADTEATVLEAVRASGASVLVVSHR RNIIAAADVVVDLEVLA >gi|302034494|gb|GL383257.1| GENE 285 304945 - 306018 1157 357 aa, chain - ## HITS:1 COG:lin2865 KEGG:ns NR:ns ## COG: lin2865 COG1294 # Protein_GI_number: 16801925 # Func_class: C Energy production and conversion # Function: Cytochrome bd-type quinol oxidase, subunit 2 # Organism: Listeria innocua # 13 346 3 330 337 230 42.0 3e-60 MLPVLETTAHSPLTIVWFVLITVLWVGFFFLEGFDFGVAMLLPFLGRDDKDRRLMVNTIG PTWDGNEVWLLTAGGATFAAFPGWYATMFSGLYLPLLLVLLGLIVRGVAFEYRSKNPSSS WRNAFDWMATIGSFLPTLVLGVGFANFVRGLAVGPHSTPDGGTAPLVTTSFWGLFTPFAL IGGILFVVLFCAHGANFVALKTMGDMHDRARKTSAKLGWIATVVALVWALMFNIMYVTRD GRQVLTWIICLLVVVLLAAGSAVVAKGREGLAFLCTALGIALMIVACMFAMYGNLGYRPS GIAFDMWIASATGRTLKIMTISACVFVPIVLAYQVWSYWVFRKRLTREAIPDTAVAA >gi|302034494|gb|GL383257.1| GENE 286 306031 - 307551 1575 506 aa, chain - ## HITS:1 COG:MT1659 KEGG:ns NR:ns ## COG: MT1659 COG1271 # Protein_GI_number: 15841078 # Func_class: C Energy production and conversion # Function: Cytochrome bd-type quinol oxidase, subunit 1 # Organism: Mycobacterium tuberculosis CDC1551 # 1 506 1 485 485 394 45.0 1e-109 MDAQLIARWQFGITTVYHFFFVPITIALSMLVAVMQTVWLKTRNDRYLRLTKFYGKLFLI NFALGVVTGIVQEFQFGMNWSEYSRFVGDIFGAPLALEALVAFFMESTFVGLWVFGWEKL PKGVHLACIYLTAIGTMISAVFILAANSWMQNPVGASYNPVTHRAELTDFGAVLSNPVFK ATFVHQISSSYTVAGALIAAIAFWHLAKVARGRTTSQISDAEEVESVRTWRWASKFGAWV LIVACVGVVLSGDYQGKVMTDAQPMKMAAAEAAYQNTSDFSVLTIGNKDGSEEVWALKIP GMLGFLGNGKWGSQVKGINELKSYQVHEYTYHRKDGSQTPLQASYQNVLRQKIDANGIKL EPNVPLSYWTFRIMITLGMIGGLIGLVMLIAMRGGRNPKPHGWLTFFMIALPLLPLFAIS FGWIFTEMGRQPWIVAGVLPTTAAVSPNVSAGSVLFSTIAYTVVYGILAVVEVGLFWKAL KEGLPELSTRDQPVTEGEDTPLSFAY >gi|302034494|gb|GL383257.1| GENE 287 307751 - 309256 1170 501 aa, chain - ## HITS:1 COG:L138484 KEGG:ns NR:ns ## COG: L138484 COG0531 # Protein_GI_number: 15673681 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Lactococcus lactis # 55 415 34 388 466 124 28.0 6e-28 MAEVKNSQLTAHNDTDMAKDQTKVLQRTLNRFDIVFLIVSAVVGLEMLGSVSAEGPETFT WLVFLIIVFLIPYSLIFAETGSAFVGEGGVYLWTRRAFGRPAAAVTSVFTWITQPVWVGG SMAFLNAEAARNHLVHFSAGSAGDYLFKLAFIWLTVFAAILSLAKAKWIPTAGAFFKISF LCLFLVTAAVYAAQHGVQPLGLGNFSPTLRGFITLTPLLLFAFLGFEGGSSASGEMRNAQ HDVSVSVLRSATMAGIFYLLPVATILLVLPPSDIDGVSGLLKAVNTVFSVYGPAAEPMMA LALVMFTLANIGQGAAWMIMSDRMQAMAAADGSFFGGFFGKFHPRLGTPVHVNLLSGIVS TLFMLAAMELTGSSADLFNVVLGVAVTTYLFSYLLIIPAAAKLRLSEPDVERPFRAGPNW FFILMCVVTTTFVAFGSWVSIFPGTLEALVGMPHDFSKAQGVSYASFEALTLGTLAFIIV MALIGYWRGAPLRRAGISTES >gi|302034494|gb|GL383257.1| GENE 288 309367 - 311367 1468 666 aa, chain - ## HITS:1 COG:Cgl0939 KEGG:ns NR:ns ## COG: Cgl0939 COG1132 # Protein_GI_number: 19552189 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Corynebacterium glutamicum # 34 666 20 648 656 647 53.0 0 MTGKDAQQAPTRNEQAEIARASSQQGHRGSQVAEKPISFGPSLKRLLGQLKPHRITLTIV VIMAAISVAFNVIGPKILGRATDVIFGGIVGKQIGKHIPAARGMSADTFINTLGKASHGG DRGKIITLLQQYPHVVIGSGIDFHRLGVIIGWALGLYACAALLMFLQGFLLNTAIQRSMY DLRRQVSAKLDKLPLSYFDGQPHGELMSRMTNDIDNVSQTLLQTLQQLLNALLTIIGVLI MMFWISPLLAVISLVVIPIAGVIAGLIGKRAQGQFAQMWKATGELNSWVEEAHSGHALVK TFGRSRAVAQEFHERNEELRQATTKAQFVSGLIQPVMFLLGNANYAIIVLIGCLRVAKGQ MPLGNVQAFIQYSRMFTQPITQIASMANLLQSGVASAERVFQVLDADELSTDTHGSLPAT KGRVVFDHVRFSYNPDKPLITDLSLVAEPGQTIAVVGPTGAGKTTLVNLLMRFYEIDDGT ITLDGVDISAVPRAELRSRLGMVLQDTWLFSGTIHDNIAYGCPEASEEDILDAARAAHVD HFVHTLPDGYDTIIDEDGSNVSVGQKQLITIARAFLAAPDLLILDEATSSVDTRTEMLVQ EAMANLRKGRTSFVIAHRLSTIRDADLILVMEHGDIVEQGSHSELLEHQGHYYELYQAQF AAASHE >gi|302034494|gb|GL383257.1| GENE 289 311364 - 313100 229 578 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 330 560 125 354 398 92 31 1e-17 MLAKLVTRHLRAYRLHVAVIIVMQVCAQIAALTLPTINADIINKGVVTADTGYVTTHSLF MLAIALGQTICQVIAVYLAAQVAMGTGRDIRDAIFTRTLDFSAREINKFGAPSLITRTTN DVQQVQMLVFMTLAMLIGAPIMMMVGIIMAVRADVSLSWIIMVAVILLAIGAGLIVSRMG PLFKRQQKRIDDLNRVVREQITGIRVVRAFARERHEAARFDATSSSLRDIQVNVGRTMAA MFPLVMLIMNLSQIAVFWFAATRIDDGQTEVGILASFTTYLMLILISVMMAVMLIVMWPR ASVCANRIEEVLHTSSSLTIDPEPVMALPDAPTLLEFRDVTFSYPGASEPVLHDISFTLA RGTTTAIIGSTGSGKSTLVNLIPRLVDVTHGQVLVNGTDVRRYDPETLWSCIGLVPQRPY LFGGTVASNLRDGRCDATDKELWNALHVAQSDDFVSHMDGKLEATITQGGTNVSGGQRQR LSIARALVKDPHIYIFDDASSALDVATNSRLRAALEANHGDAAMLIVAQRVSTIRNADQI LVLDAGHIVGRGTHDELIKSCPTYLEIVDSQLSIEEAA >gi|302034494|gb|GL383257.1| GENE 290 313182 - 313373 75 63 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313764815|gb|EFS36179.1| ## NR: gi|313764815|gb|EFS36179.1| hypothetical protein HMPREF9567_00452 [Propionibacterium acnes HL013PA1] hypothetical protein HMPREF9618_00634 [Propionibacterium acnes HL082PA1] hypothetical protein HMPREF9569_00695 [Propionibacterium acnes HL078PA1] hypothetical protein HMPREF9579_00702 [Propionibacterium acnes HL087PA1] # 1 63 1 63 63 98 100.0 2e-19 METSYAKIGKIPISYPLLLVGELAHPVRINQKNSATTSVSSPSQHPTSCDTQPTDLPHAG DQP >gi|302034494|gb|GL383257.1| GENE 291 313372 - 314481 754 369 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3220 NR:ns ## KEGG: HMPREF0675_3220 # Name: not_defined # Def: DNA-binding protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 369 1 369 369 688 100.0 0 MSEDMREIGERIKSRMPEGMTQQSLAEAMEMTPDALSRMLNGKRGITMTELGKAAEVLGA SAHWLVTGHKDPYAMRFAARHTYDFDTHRHINEGREKDREVLDHIAEVYRAAHGSLRASS VVLPKTAKQMREALGDGFVNDFAARVKEVLDVDVMKRSGLSTDYSLCIVGRRVVVLNKQF WARTTWSLAHELGHLVQGHLDRDGDIAGEADEKQANAFAAELLLPEKWMRNFNWPALTRA DVARMVWEAKVSAAAMRVRIETLRLKASDEVREALELTTPKLLTLARTSAAERYRDVFVP DWSPTVIAALLEETEKGNADPMLTSRVLGVPVDDIDFPEPPSEEEMVERYERTMLDRRRR DDGAGESAL >gi|302034494|gb|GL383257.1| GENE 292 314688 - 315197 278 169 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313764814|gb|EFS36178.1| ## NR: gi|313764814|gb|EFS36178.1| hypothetical protein HMPREF9567_00451 [Propionibacterium acnes HL013PA1] hypothetical protein HMPREF9589_01766 [Propionibacterium acnes HL059PA1] hypothetical protein HMPREF9612_01014 [Propionibacterium acnes HL063PA2] hypothetical protein HMPREF9597_00721 [Propionibacterium acnes HL005PA4] hypothetical protein HMPREF9598_02232 [Propionibacterium acnes HL050PA1] hypothetical protein HMPREF9600_00307 [Propionibacterium acnes HL050PA3] hypothetical protein HMPREF9608_01625 [Propionibacterium acnes HL067PA1] hypothetical protein HMPREF9609_01842 [Propionibacterium acnes HL027PA1] hypothetical protein HMPREF9613_00581 [Propionibacterium acnes HL002PA1] hypothetical protein HMPREF9620_00665 [Propionibacterium acnes HL037PA1] hypothetical protein HMPREF9590_02241 [Propionibacterium acnes HL059PA2] hypothetical protein HMPREF9592_01239 [Propionibacterium acnes HL046PA1] hypothetical protein HMPREF9602_01048 [Propionibacterium acnes HL030PA2] hypothetical protein HMPREF9581_00625 [Propionibacterium acnes HL087PA3] hypothetical protein HMPREF9579_00703 [Propionibacterium acnes HL087PA1] hypothetical protein HMPREF9588_00812 [Propionibacterium acnes HL025PA2] # 1 169 1 169 169 325 100.0 8e-88 MVIRKETFTNLHGCDDVVYAGKDVKSAGSGPTPRTLKQSTAGFRHRSPITVGENELNAKH GGPSLKMHRLHLLQLESHVIHQMHTRLIISVNAPIHFGPRQPSLTRFLHSAILENLHEFS GQSAPFASLGHIYGNCTDEEIDIAAVAIFANTHFSVRGGHNDPAPPREQ >gi|302034494|gb|GL383257.1| GENE 293 315330 - 316862 1589 510 aa, chain + ## HITS:1 COG:MT3705 KEGG:ns NR:ns ## COG: MT3705 COG1190 # Protein_GI_number: 15843211 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Lysyl-tRNA synthetase (class II) # Organism: Mycobacterium tuberculosis CDC1551 # 5 508 2 502 505 481 51.0 1e-135 MSSDTASSQSPDVSEQMQVRLDKRARIIADGGQAYPVDLLRDHTLVQVRQKYTDDTGELT LAPGEETTDEVTVGGRVVFVRNTGKLCFASLQDGFTETSNGERLQIMLSKAEVGDESLAA WKSDVDLGDHVWVRGRVVVSRRGELSIMAAEWRMASKALRPLPTLHKELSEESRVRRRYA DLVVREESRQMVRTRAVITRAVRRALDERGFLEIETPILQLVHGGAAARPFNTHLNAFDI DMSLRIALELYLKRTMVGGTDRVYEMGRVFRNEGIDSSHSAEFSMLEAYMSWGNQFTIAE VIKDIIMAVADALDVHQIETPKGTIDLDGQWRWVSVYPGLSEKLGREVTLDTPLEELQSI AAEHEIEIDQSWEAGKVVMELFGELVEPGLINPTFVCDYPAIAQPLARPHRDDPRMVEAW DLIIGGMERGTGFSELVDPVIQREVLTKQSLAAAAGDPEAMQLDEDFLEALEFGCPPMGG LGLGVDRLVMLFTNAGIRETILFPLLKPEH >gi|302034494|gb|GL383257.1| GENE 294 316901 - 317182 310 93 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3223 NR:ns ## KEGG: HMPREF0675_3223 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 93 1 93 93 174 100.0 1e-42 MPESKVRPQAKKKAQAKNRATMDERRAEKKAAPVDRSWVPKVFVPLFLLGVLWLIVYYIA GNQIPGISNLGDWNILIGMGLMAAGFGVATLWK >gi|302034494|gb|GL383257.1| GENE 295 317304 - 318134 535 276 aa, chain + ## HITS:1 COG:Rv0012 KEGG:ns NR:ns ## COG: Rv0012 COG3879 # Protein_GI_number: 15607154 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mycobacterium tuberculosis H37Rv # 67 275 46 256 262 105 37.0 1e-22 MSDDNDPDDVRPDDASVDIDEDRSQATTDPSIQDVRSDSRHPRLARSASVIVMALAGLMM TTAAINSRGHDLRPERDTDMATLVRSQASHNAALQKEAAGLRAQVEDLSKANQTPGVTSS VISSASALAPSVGLEAVSGKALRVTLDDAPLSENPDGVDANMLVVHQQDIQMVVNTLWSG GAEAMTIQGQRVISTTAVKCVGNTVVLHGVAYAPPYVIEAIGDLNAMQKALDTSEAVRIY KEYVSAYQLGWSVERAGQVTMPAYTGAVAVSHATPR >gi|302034494|gb|GL383257.1| GENE 296 318225 - 320039 1392 604 aa, chain - ## HITS:1 COG:Rv0014c_1 KEGG:ns NR:ns ## COG: Rv0014c_1 COG0515 # Protein_GI_number: 15607156 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Mycobacterium tuberculosis H37Rv # 2 422 30 426 428 306 45.0 1e-82 GDHRLGRDVAVKKLRTDLASDDTFQARFQREAQSAARLNHPNIAAVYDTGETKDPATGLP VPFIVMELIDGHTLRDVLRDGRKILPRRALEFTQGVLDALSYSHAAGIVHRDIKPANVML TREGYVKVMDFGIARAVADTSATMTQTAAVIGTAQYLSPEQARGETVDNRADIYATGCLL YELLVGRPPFIGDSPVSVAYQHVREVPAPPSSLDAEITHQMDAITLKALAKDPADRYQTA KQMRDDIDRLLSGREPFAMQNYADSEADTEEQTHLIPAAATDPVPATAAQQDEASPASAE SPQEPEEPHRKRWPVIIVTIVVVVLLALLGFGLHKIFNSSSQPSPAPTPSRTVKMVKVPA VTGLSQQGATSTLENAGLKVQVDHVQKDQATANQVVSQSPAANEKVPAGSDVKITVNDGP KQLTIPRNIVGLPKNDALKALKDAGFSDSQIKATNDDPKTEPNSAKAGAVDAVSPGAGTT LTPDQQVTLTIATGKSVVPNLKGMSVEEANSAAGSSGFSISVERQVTSSAAPGTVFDQDP DYGAIANRSTAIKVLVAVAPPAPEPTREPPTNSAPSEEPSSSSIAPVPPAPTTAVPTTSS SSGR Prediction of potential genes in microbial genomes Time: Thu Jul 21 05:42:40 2011 Seq name: gi|302034493|gb|GL383258.1| Propionibacterium acnes HL025PA2 genomic scaffold Scfld11, whole genome shotgun sequence Length of sequence - 8647 bp Number of predicted genes - 8, with homology - 6 Number of transcription units - 7, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 279 - 1778 1272 ## COG1113 Gamma-aminobutyrate permease and related permeases 2 2 Op 1 . + CDS 2099 - 2392 78 ## PPA2375 hypothetical protein 3 2 Op 2 . + CDS 2347 - 2562 95 ## - Term 2527 - 2572 -0.8 4 3 Tu 1 . - CDS 2728 - 2859 125 ## 5 4 Tu 1 . + CDS 3140 - 4294 696 ## COG1376 Uncharacterized protein conserved in bacteria + Term 4319 - 4357 6.1 6 5 Tu 1 . + CDS 4565 - 5764 892 ## COG0797 Lipoproteins 7 6 Tu 1 . + CDS 6059 - 7345 1366 ## COG0372 Citrate synthase 8 7 Tu 1 . + CDS 7584 - 8609 537 ## COG1816 Adenosine deaminase Predicted protein(s) >gi|302034493|gb|GL383258.1| GENE 1 279 - 1778 1272 499 aa, chain + ## HITS:1 COG:ECs5186 KEGG:ns NR:ns ## COG: ECs5186 COG1113 # Protein_GI_number: 15834440 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Escherichia coli O157:H7 # 15 475 12 469 470 499 55.0 1e-141 MSHMDSATQATTPTEGPTEEPQLQRGLKNRHLQLIAIGGAIGTGLFLGSGKTISLAGPSI LLVYLIIGAVLFFVMRAMGELLLSNLAYKSFADFATDLVGPGAGFYMGWTYWMCWVVIGN ADTIAMCGYLAAWFPHLDKWIPATCIVLLLTCLNMVAVKLFGEMEFWFAMIKIVTIIALI LVGGYLAITGFQPPRSGVPAASFSHLWDRGGFFPTGFMGFIAGFQIAIFSFQGIEMAGTA AAETADPEHNLPKAINSIPARVLIFYVLTLGVIMAVQPWDLINPQASPFVEMFSFIGILI AFHIVNFVVLTSAASSANSGVFSTSRILYGLAREKDAPPVFAKLSSRHIPRNALILTAMC IAPAIVLVTLEDSVMDAFSLVAGVSSVLYLSVWGLILVCYLKYLGKHPQRHAESAFKMPA GRVMSWVGILFFITILIMLGFSADSRQALIAAPVWVIFMMVLYRLLASTRADHTRIDFDA ERIRALEELHRTQEDEHQA >gi|302034493|gb|GL383258.1| GENE 2 2099 - 2392 78 97 aa, chain + ## HITS:1 COG:no KEGG:PPA2375 NR:ns ## KEGG: PPA2375 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 97 8 104 104 161 100.0 6e-39 MREEAVVRLADPLRDFSQPSVEPCVAYVSDPLPMAGPDDPVLLSFETSADRSDNPLGVVE PVGDFYALAKGRPLPLPQTLRCSWNHLCDSSSSSSRR >gi|302034493|gb|GL383258.1| GENE 3 2347 - 2562 95 71 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MEPSMRFVVIFFTPLIKALEKSFLLAFTLIKSVFRWALGAAPADTHRLTSGIRPVGATTA CHPKTDSSQQS >gi|302034493|gb|GL383258.1| GENE 4 2728 - 2859 125 43 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRDDSDEQLAVRKRPDWLTWLIVVVVTIIGVTIIALWWYCLLN >gi|302034493|gb|GL383258.1| GENE 5 3140 - 4294 696 384 aa, chain + ## HITS:1 COG:Cgl2423 KEGG:ns NR:ns ## COG: Cgl2423 COG1376 # Protein_GI_number: 19553673 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 37 383 57 397 403 169 32.0 6e-42 MTAAACAKTSVGNGFGSSGNSATPTPTPTPTPATLTIAADHPITELQPGDALKFAVANGT LKDVKVTDSEGSEVTGTLKDAVWTPSKPWSLKTSYTVAATLSNTDPHAGSTTTVTKNIKS IDGAVNVVEMLYSDASVGIGMPVIIKFGHEVIDADMRARIQKAMHIDVSPQQEGAWGWID HSQLMWRPKDFWKAGTKVNVSGNLTGLPTSSHRWITHDVKGSFQVGQARIVKIYINKHKM DVLQDGNVVRTIPVTTGKPGASTTTRSGTKVIIERDATRIMDSSTVGIPKGSSDYYHLKV KYAMRVTYTGEFIHAAPWSERSQGSANVSHGCVGLSTENARWLFNFCAAGDPVINSGSNR MFKPDEGIGCWCYDWSGWQKLSAV >gi|302034493|gb|GL383258.1| GENE 6 4565 - 5764 892 399 aa, chain + ## HITS:1 COG:alr2935 KEGG:ns NR:ns ## COG: alr2935 COG0797 # Protein_GI_number: 17230427 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipoproteins # Organism: Nostoc sp. PCC 7120 # 288 399 250 370 371 96 47.0 9e-20 MIRPKRSVRGAAATIALTSGISVVAPAVIGSVAHAANTQTMYTTADVNVRSASSNSGRVL TVAARGQSVKVTGEKVRGWVPVAVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTMIAAVP VNVRSDSANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYGRYLTTGKAAAAPA KPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVINQLASGAGVQVTGEV HGNWVQIRANGYTGWAYRTHLTGNVPATKVDTPSRNTHRGSDTSRDKARPPRQDSSNDDS VKGSGRIAGRCIASFYDEPQTTASGEQFNPNAMTAANKTLPLGTRIRVTNVRNGRSTVVR INDRGPYVAGRCVDLSRASFARIADIGQGTAPITYTILG >gi|302034493|gb|GL383258.1| GENE 7 6059 - 7345 1366 428 aa, chain + ## HITS:1 COG:MT0920 KEGG:ns NR:ns ## COG: MT0920 COG0372 # Protein_GI_number: 15840315 # Func_class: C Energy production and conversion # Function: Citrate synthase # Organism: Mycobacterium tuberculosis CDC1551 # 14 427 17 431 431 527 60.0 1e-149 MGSSARFVDEDTHLDFSKVVATDGQVGYDVAGLLNKTGNVMIDPGFVNTASCESQITYID GEQGVLRYRGYPIEQLAEQSTFLETAYLVLYGELPSKAQLDGFEERIRRTTLIDERMRDL FRCFPRRSHPMPVLAAGIMALSTFSQKSSGTDPDQIEAATTRLIAKVPTLAAFGYKNSMG QPTLYPDNSLSYVQNFIRMSFGFPTEPYEFNDEITRALETLLILHVDHEQNCSTSTVRMV ASSGANMYAAVAAGVNALSGPKHGGANQAVLEMLQFIRDSGMTTKEFVRKVKDKESDIKL MGFGHRIYKNYDPRAAIIKKHADRIMELHTGREDLLEIAKELEETALNDDYFKERKLYPN VDFYTGLIYEAMGFPMNMFTVLFALGRLPGWIAQYREQVASGGNKIWRPRQIFTGSDKRD YVPLNKRA >gi|302034493|gb|GL383258.1| GENE 8 7584 - 8609 537 341 aa, chain + ## HITS:1 COG:ML0700 KEGG:ns NR:ns ## COG: ML0700 COG1816 # Protein_GI_number: 15827296 # Func_class: F Nucleotide transport and metabolism # Function: Adenosine deaminase # Organism: Mycobacterium leprae # 10 337 14 349 362 248 42.0 2e-65 MDSAEAMNLPKVVLHDHLDGGLRPATVLELAAQRGRPVPAQTPEDLATWFFESADSGSLA RYLDAFTETIALMQDADSLRRVAREFVVDMATDGVIYAEARWAPQQHLTGGLSAAEAVEA VQVGLVDGMESASLSGTTIIARQILCLMRHLDVPEDVVDLAVNHAPGVVGVDVAGPEDGF PLAPFTNALTRVQAAGIHLTVHAGEAAGPESILDALNHGAERLGHGVRIIEDRDESGWGP TAQQVLSNQVPLEVCPTSNTQTGICRKVAEHPLSTLWSTGFNITVSCDNRLMSRTTTSRE ISLVSQALCWNRDDALAAQRNALQAAFCSQDDKQSLVPLLV Prediction of potential genes in microbial genomes Time: Thu Jul 21 05:44:15 2011 Seq name: gi|302034492|gb|GL383259.1| Propionibacterium acnes HL025PA2 genomic scaffold Scfld12, whole genome shotgun sequence Length of sequence - 246855 bp Number of predicted genes - 238, with homology - 227 Number of transcription units - 110, operones - 60 average op.length - 3.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 88 - 141 19.5 1 1 Op 1 . - CDS 155 - 1714 872 ## HMPREF0675_4689 hypothetical protein 2 1 Op 2 . - CDS 1656 - 1982 126 ## PPA2356 hypothetical protein 3 1 Op 3 . - CDS 1997 - 3031 637 ## COG1472 Beta-glucosidase-related glycosidases 4 2 Op 1 . - CDS 3288 - 4721 300 ## COG0515 Serine/threonine protein kinase 5 2 Op 2 . - CDS 4782 - 6200 1107 ## COG1113 Gamma-aminobutyrate permease and related permeases - TRNA 6470 - 6545 88.5 # His GTG 0 0 - Term 6386 - 6430 1.0 6 3 Op 1 . - CDS 6627 - 7244 542 ## COG1949 Oligoribonuclease (3'->5' exoribonuclease) 7 3 Op 2 . - CDS 7299 - 8510 760 ## HMPREF0675_4682 transporter, major facilitator family protein - Prom 8629 - 8688 78.5 + TRNA 8612 - 8687 75.7 # Arg TCT 0 0 + Prom 8613 - 8672 78.0 8 4 Op 1 . + CDS 8765 - 10075 1039 ## PPA1640 hypothetical protein 9 4 Op 2 . + CDS 10098 - 11963 1145 ## PPA1639 putative ABC transporter 10 4 Op 3 . + CDS 11960 - 13570 845 ## HMPREF0675_4678 hypothetical protein + Term 13631 - 13676 1.4 11 5 Op 1 3/0.000 + CDS 13689 - 14150 281 ## COG0629 Single-stranded DNA-binding protein 12 5 Op 2 . + CDS 14272 - 15957 1854 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains 13 6 Op 1 . - CDS 15990 - 16433 136 ## gi|315079630|gb|EFT51623.1| conserved domain protein 14 6 Op 2 . - CDS 16455 - 16796 360 ## COG1695 Predicted transcriptional regulators 15 6 Op 3 . - CDS 16878 - 19751 1217 ## COG0277 FAD/FMN-containing dehydrogenases 16 6 Op 4 . - CDS 19756 - 20286 337 ## COG1846 Transcriptional regulators 17 6 Op 5 . - CDS 20336 - 20542 61 ## gi|313773633|gb|EFS39599.1| hypothetical protein HMPREF9574_00027 + Prom 20307 - 20366 2.0 18 7 Op 1 . + CDS 20516 - 22345 1174 ## COG1022 Long-chain acyl-CoA synthetases (AMP-forming) 19 7 Op 2 . + CDS 22342 - 23187 323 ## HMPREF0675_4670 acyl-CoA thioester hydrolase, YbgC/YbaW family 20 8 Op 1 7/0.000 - CDS 23195 - 23902 367 ## COG0366 Glycosidases 21 8 Op 2 . - CDS 23957 - 24868 862 ## COG0366 Glycosidases - Term 24895 - 24928 2.1 22 9 Op 1 . - CDS 24944 - 26392 985 ## COG0362 6-phosphogluconate dehydrogenase 23 9 Op 2 . - CDS 26385 - 26522 56 ## gi|313793873|gb|EFS41897.1| hypothetical protein HMPREF9575_00166 24 10 Tu 1 . + CDS 26584 - 26811 252 ## HMPREF0675_4666 hypothetical protein - Term 26825 - 26879 19.3 25 11 Tu 1 . - CDS 26887 - 29499 1861 ## COG0308 Aminopeptidase N - Prom 29538 - 29597 4.7 26 12 Tu 1 . + CDS 30017 - 32239 1415 ## COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) 27 13 Tu 1 . - CDS 32323 - 33612 900 ## COG4552 Predicted acetyltransferase involved in intracellular survival and related acetyltransferases - Prom 33720 - 33779 1.9 28 14 Tu 1 . + CDS 33679 - 34152 347 ## COG0698 Ribose 5-phosphate isomerase RpiB + Term 34322 - 34357 6.7 29 15 Tu 1 . - CDS 34141 - 34380 199 ## HMPREF0675_4660 hypothetical protein 30 16 Op 1 . + CDS 34379 - 35278 507 ## COG0266 Formamidopyrimidine-DNA glycosylase 31 16 Op 2 . + CDS 35303 - 36649 487 ## PPA1622 hypothetical protein 32 17 Tu 1 . - CDS 36793 - 37008 86 ## 33 18 Op 1 . + CDS 36917 - 40162 2492 ## COG1190 Lysyl-tRNA synthetase (class II) 34 18 Op 2 . + CDS 40205 - 41146 488 ## PPA1620 putative poly(3-hydroxyalkanoate) depolymerase (EC:3.1.1.-) + Term 41154 - 41203 5.2 + TRNA 41238 - 41313 88.2 # Pro TGG 0 0 35 19 Tu 1 . - CDS 41345 - 41554 160 ## 36 20 Tu 1 . + CDS 41912 - 43375 876 ## HMPREF0675_4652 hypothetical protein 37 21 Op 1 3/0.000 - CDS 43529 - 45784 1127 ## COG0210 Superfamily I DNA and RNA helicases 38 21 Op 2 . - CDS 45777 - 47681 715 ## COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster 39 21 Op 3 3/0.000 - CDS 47662 - 52131 2407 ## COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster 40 21 Op 4 6/0.000 - CDS 52128 - 55556 2602 ## COG1002 Type II restriction enzyme, methylase subunits 41 21 Op 5 6/0.000 - CDS 55616 - 56752 771 ## COG1002 Type II restriction enzyme, methylase subunits 42 21 Op 6 1/0.050 - CDS 56739 - 58706 1123 ## COG0553 Superfamily II DNA/RNA helicases, SNF2 family 43 21 Op 7 . - CDS 58703 - 59614 738 ## COG0553 Superfamily II DNA/RNA helicases, SNF2 family 44 21 Op 8 . - CDS 59678 - 59959 220 ## HMPREF0675_4645 hypothetical protein 45 21 Op 9 . - CDS 59775 - 60224 72 ## PPA2360 hypothetical protein - Prom 60399 - 60458 76.9 + TRNA 60384 - 60457 81.2 # Gly TCC 0 0 46 22 Tu 1 . + CDS 60713 - 62305 1876 ## COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) 47 23 Op 1 . + CDS 62410 - 63711 1016 ## COG0628 Predicted permease 48 23 Op 2 5/0.000 + CDS 63787 - 64425 673 ## COG0740 Protease subunit of ATP-dependent Clp proteases 49 23 Op 3 24/0.000 + CDS 64361 - 65122 709 ## COG0740 Protease subunit of ATP-dependent Clp proteases + Prom 65164 - 65223 2.1 50 23 Op 4 . + CDS 65311 - 66600 242 ## PROTEIN SUPPORTED gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 + Term 66607 - 66644 4.7 51 24 Tu 1 . + CDS 66736 - 69996 2005 ## COG0793 Periplasmic protease + Term 70035 - 70077 12.5 52 25 Tu 1 . - CDS 70114 - 74079 2259 ## HMPREF0675_4636 F5/8 type C domain protein - Term 74218 - 74256 7.0 53 26 Tu 1 . - CDS 74306 - 76918 2319 ## COG0525 Valyl-tRNA synthetase - Term 76978 - 77028 3.4 54 27 Op 1 . - CDS 77059 - 77856 775 ## COG1651 Protein-disulfide isomerase 55 27 Op 2 . - CDS 77941 - 78435 461 ## HMPREF0675_4633 putative type IV conjugative transfer system protein TraL 56 28 Op 1 4/0.000 - CDS 78601 - 79335 203 ## PROTEIN SUPPORTED gi|163781723|ref|ZP_02176723.1| 50S ribosomal protein L13 57 28 Op 2 5/0.000 - CDS 79332 - 80264 598 ## COG3429 Glucose-6-P dehydrogenase subunit 58 28 Op 3 . - CDS 80274 - 81719 931 ## COG0364 Glucose-6-phosphate 1-dehydrogenase 59 29 Tu 1 . + CDS 81977 - 83086 948 ## COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor) 60 30 Tu 1 . + CDS 83200 - 84708 771 ## COG4409 Neuraminidase (sialidase) + Term 84749 - 84799 8.1 61 31 Op 1 3/0.000 - CDS 84810 - 85766 667 ## COG1612 Uncharacterized protein required for cytochrome oxidase assembly 62 31 Op 2 45/0.000 - CDS 85688 - 86452 613 ## COG0842 ABC-type multidrug transport system, permease component 63 31 Op 3 . - CDS 86454 - 87203 301 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 64 31 Op 4 . - CDS 87232 - 89715 2387 ## COG3808 Inorganic pyrophosphatase 65 32 Op 1 2/0.000 - CDS 89879 - 90940 570 ## COG1609 Transcriptional regulators 66 32 Op 2 20/0.000 - CDS 90966 - 91871 986 ## COG3833 ABC-type maltose transport systems, permease component 67 32 Op 3 19/0.000 - CDS 91871 - 93475 1311 ## COG1175 ABC-type sugar transport systems, permease components 68 32 Op 4 . - CDS 93576 - 94769 1158 ## COG2182 Maltose-binding periplasmic proteins/domains 69 33 Tu 1 . + CDS 94787 - 94978 82 ## HMPREF0675_4619 hypothetical protein 70 34 Tu 1 . - CDS 95139 - 95342 142 ## 71 35 Op 1 3/0.000 + CDS 95256 - 95921 415 ## COG2345 Predicted transcriptional regulator 72 35 Op 2 12/0.000 + CDS 95918 - 97366 1435 ## COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component 73 35 Op 3 . + CDS 97419 - 98627 978 ## COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component 74 35 Op 4 . + CDS 98627 - 98950 277 ## COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 75 35 Op 5 4/0.000 + CDS 98957 - 99730 906 ## COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component 76 35 Op 6 19/0.000 + CDS 99727 - 100968 976 ## COG0520 Selenocysteine lyase 77 35 Op 7 4/0.000 + CDS 100965 - 101465 369 ## COG0822 NifU homolog involved in Fe-S cluster formation 78 35 Op 8 . + CDS 101462 - 101818 442 ## COG2151 Predicted metal-sulfur cluster biosynthetic enzyme - Term 101816 - 101857 8.2 79 36 Tu 1 . - CDS 101892 - 103904 1407 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family 80 37 Tu 1 . - CDS 104344 - 104799 285 ## PPA1540 hypothetical protein + Prom 104674 - 104733 2.5 81 38 Op 1 . + CDS 104818 - 105222 305 ## COG2153 Predicted acyltransferase 82 38 Op 2 . + CDS 105281 - 106879 1496 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains 83 38 Op 3 . + CDS 106949 - 107503 533 ## HMPREF0675_4605 hypothetical protein - Term 107307 - 107343 3.1 84 39 Tu 1 . - CDS 107532 - 108203 478 ## COG0500 SAM-dependent methyltransferases 85 40 Op 1 . - CDS 108350 - 109180 428 ## COG3346 Uncharacterized conserved protein 86 40 Op 2 . - CDS 109259 - 109507 153 ## PPA1534 hypothetical protein 87 41 Op 1 3/0.000 + CDS 109682 - 110401 240 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 88 41 Op 2 . + CDS 110442 - 111215 711 ## COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH) + Term 111258 - 111312 16.3 89 42 Tu 1 . - CDS 111221 - 111955 506 ## PPA1531 hypothetical protein 90 43 Op 1 . + CDS 112070 - 112855 197 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 91 43 Op 2 26/0.000 + CDS 112882 - 113349 352 ## COG1585 Membrane protein implicated in regulation of membrane protease activity 92 43 Op 3 . + CDS 113430 - 114596 1102 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs 93 44 Tu 1 . - CDS 114794 - 115780 924 ## COG0385 Predicted Na+-dependent transporter 94 45 Tu 1 . + CDS 115813 - 116622 198 ## PROTEIN SUPPORTED gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 95 46 Op 1 . - CDS 116629 - 117231 426 ## COG0242 N-formylmethionyl-tRNA deformylase 96 46 Op 2 . - CDS 117298 - 118380 571 ## COG2706 3-carboxymuconate cyclase 97 46 Op 3 . - CDS 118305 - 118547 98 ## gi|314923771|gb|EFS87602.1| hypothetical protein HMPREF9603_00728 + Prom 118435 - 118494 1.6 98 47 Tu 1 . + CDS 118528 - 119286 301 ## COG0739 Membrane proteins related to metalloendopeptidases 99 48 Op 1 . - CDS 119206 - 120153 550 ## COG0582 Integrase 100 48 Op 2 . - CDS 120020 - 120298 72 ## + Prom 120204 - 120263 3.1 101 49 Op 1 38/0.000 + CDS 120441 - 121292 1436 ## PROTEIN SUPPORTED gi|50842999|ref|YP_056226.1| 30S ribosomal protein S2 102 49 Op 2 . + CDS 121327 - 122139 428 ## PROTEIN SUPPORTED gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts + Term 122183 - 122220 6.8 103 50 Tu 1 . - CDS 122005 - 122268 64 ## 104 51 Op 1 33/0.000 + CDS 122324 - 123037 699 ## COG0528 Uridylate kinase 105 51 Op 2 7/0.000 + CDS 123070 - 123624 690 ## COG0233 Ribosome recycling factor + Term 123659 - 123702 8.5 106 51 Op 3 . + CDS 123780 - 124499 554 ## COG0575 CDP-diglyceride synthetase + Prom 124501 - 124560 1.9 107 52 Op 1 . + CDS 124583 - 124756 165 ## 108 52 Op 2 . + CDS 124750 - 125400 421 ## COG1495 Disulfide bond formation protein DsbB 109 53 Op 1 . + CDS 125560 - 126690 835 ## COG0820 Predicted Fe-S-cluster redox enzyme 110 53 Op 2 1/0.050 + CDS 126775 - 127221 439 ## COG0334 Glutamate dehydrogenase/leucine dehydrogenase 111 53 Op 3 . + CDS 127197 - 128111 939 ## COG0334 Glutamate dehydrogenase/leucine dehydrogenase + Term 128247 - 128304 -0.4 112 54 Op 1 . - CDS 128089 - 129180 739 ## HMPREF0675_4579 hypothetical protein 113 54 Op 2 . - CDS 129177 - 130550 781 ## COG1680 Beta-lactamase class C and other penicillin binding proteins 114 55 Op 1 17/0.000 + CDS 130638 - 131861 721 ## COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase 115 55 Op 2 . + CDS 131876 - 133138 646 ## COG0750 Predicted membrane-associated Zn-dependent proteases 1 + Term 133139 - 133181 -0.5 116 56 Tu 1 . + CDS 133441 - 133941 155 ## COG2374 Predicted extracellular nuclease 117 57 Tu 1 . + CDS 134055 - 134774 531 ## COG0819 Putative transcription activator 118 58 Op 1 2/0.000 + CDS 134961 - 136103 874 ## COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis 119 58 Op 2 . + CDS 136105 - 136950 342 ## COG3393 Predicted acetyltransferase 120 59 Op 1 42/0.000 - CDS 136944 - 137882 732 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 121 59 Op 2 . - CDS 137961 - 138653 298 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 122 59 Op 3 . - CDS 138650 - 139660 686 ## HMPREF0675_4569 actinobacterial surface-anchored protein domain protein 123 59 Op 4 . - CDS 139681 - 141204 1047 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin 124 59 Op 5 . - CDS 141201 - 143843 1643 ## PPA1500 hypothetical protein - Prom 143883 - 143942 1.7 + Prom 143823 - 143882 3.8 125 60 Op 1 . + CDS 144013 - 145770 1417 ## COG0442 Prolyl-tRNA synthetase + Prom 145774 - 145833 3.5 126 60 Op 2 . + CDS 145931 - 147682 1035 ## PPA1498 hypothetical protein + Term 147710 - 147748 11.4 127 61 Tu 1 . + CDS 147768 - 148535 594 ## COG0730 Predicted permeases 128 62 Tu 1 . - CDS 148566 - 149528 588 ## PPA1496 hypothetical protein - Prom 149620 - 149679 4.7 + Prom 149564 - 149623 2.2 129 63 Op 1 32/0.000 + CDS 149657 - 150193 639 ## COG0779 Uncharacterized protein conserved in bacteria 130 63 Op 2 20/0.000 + CDS 150195 - 151166 616 ## PROTEIN SUPPORTED gi|17988250|ref|NP_540884.1| transcription elongation factor NusA + Term 151188 - 151231 4.4 131 63 Op 3 . + CDS 151246 - 151494 435 ## PROTEIN SUPPORTED gi|213961178|ref|ZP_03389457.1| LSU ribosomal protein L7AE 132 63 Op 4 . + CDS 151715 - 154609 2297 ## COG0532 Translation initiation factor 2 (IF-2; GTPase) + Term 154625 - 154677 15.0 + Prom 154656 - 154715 3.6 133 64 Tu 1 . + CDS 154778 - 155299 176 ## gi|332675921|gb|AEE72737.1| hypothetical protein PAZ_c15790 + Term 155342 - 155387 2.5 134 65 Tu 1 . - CDS 155238 - 155537 125 ## 135 66 Op 1 . + CDS 155389 - 156078 253 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 136 66 Op 2 . + CDS 156075 - 157247 590 ## HMPREF0675_4556 putative type IV conjugative transfer system protein TraL 137 66 Op 3 . + CDS 157244 - 157855 429 ## HMPREF0675_4555 hypothetical protein 138 66 Op 4 . + CDS 157936 - 158367 521 ## COG0858 Ribosome-binding factor A + Term 158445 - 158484 -0.2 139 67 Op 1 . - CDS 158431 - 159804 1059 ## COG0371 Glycerol dehydrogenase and related enzymes 140 67 Op 2 . - CDS 159807 - 160106 94 ## HMPREF0675_4552 phosphocarrier, HPr family 141 67 Op 3 6/0.000 - CDS 160103 - 160471 337 ## COG3731 Phosphotransferase system sorbitol-specific component IIA 142 67 Op 4 6/0.000 - CDS 160499 - 161548 1115 ## COG3732 Phosphotransferase system sorbitol-specific component IIBC 143 67 Op 5 . - CDS 161550 - 162128 466 ## COG3730 Phosphotransferase system sorbitol-specific component IIC 144 67 Op 6 . - CDS 162212 - 162715 408 ## PPA1483 sorbitol operon activator 145 67 Op 7 . - CDS 162715 - 164637 1268 ## COG3711 Transcriptional antiterminator 146 68 Tu 1 . + CDS 164380 - 165018 181 ## PPA1481 hypothetical protein 147 69 Op 1 . + CDS 165742 - 166068 347 ## COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain 148 69 Op 2 . + CDS 166121 - 167008 681 ## COG0130 Pseudouridine synthase 149 70 Tu 1 . - CDS 167162 - 167464 91 ## gi|314962063|gb|EFT06164.1| hypothetical protein HMPREF9614_00186 + Prom 167110 - 167169 7.0 150 71 Op 1 16/0.000 + CDS 167340 - 168647 1113 ## COG4175 ABC-type proline/glycine betaine transport system, ATPase component 151 71 Op 2 14/0.000 + CDS 168653 - 169519 965 ## COG4176 ABC-type proline/glycine betaine transport system, permease component 152 71 Op 3 . + CDS 169562 - 170569 1011 ## COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components + Term 170592 - 170631 4.4 153 72 Tu 1 . - CDS 170571 - 170777 73 ## 154 73 Op 1 9/0.000 + CDS 170721 - 171617 359 ## PROTEIN SUPPORTED gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 + Prom 171707 - 171766 1.6 155 73 Op 2 . + CDS 171857 - 172120 446 ## PROTEIN SUPPORTED gi|50842951|ref|YP_056178.1| 30S ribosomal protein S15 + Term 172137 - 172181 9.2 156 74 Tu 1 . - CDS 172126 - 172308 72 ## gi|314976668|gb|EFT20763.1| hypothetical protein HMPREF9566_01379 157 75 Tu 1 . + CDS 172441 - 174642 2501 ## COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) + Prom 174691 - 174750 59.4 158 76 Op 1 . + CDS 174883 - 175623 672 ## COG0289 Dihydrodipicolinate reductase 159 76 Op 2 . + CDS 175640 - 176455 396 ## PPA1469 hypothetical protein + Term 176487 - 176538 -0.8 160 77 Tu 1 . + CDS 176563 - 178302 1418 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 161 78 Tu 1 . - CDS 178354 - 178548 119 ## gi|313801400|gb|EFS42651.1| hypothetical protein HMPREF9576_02285 - Prom 178578 - 178637 1.8 162 79 Tu 1 . + CDS 178759 - 180432 1480 ## COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily + Term 180450 - 180478 -0.0 163 80 Op 1 . + CDS 180574 - 180759 334 ## PROTEIN SUPPORTED gi|213961153|ref|ZP_03389432.1| ribosomal protein L28 + Term 180781 - 180808 1.5 164 80 Op 2 . + CDS 180809 - 183058 1422 ## COG1200 RecG-like helicase - Term 183069 - 183107 -0.6 165 81 Tu 1 . - CDS 183163 - 183585 439 ## HMPREF0675_4531 pyridoxamine 5'-phosphate oxidase family protein 166 82 Op 1 14/0.000 + CDS 183722 - 184330 212 ## PROTEIN SUPPORTED gi|163764797|ref|ZP_02171850.1| ribosomal protein L29 167 82 Op 2 . + CDS 184327 - 184800 321 ## PROTEIN SUPPORTED gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 168 82 Op 3 . + CDS 184804 - 185061 151 ## gi|314919257|gb|EFS83088.1| hypothetical protein HMPREF9598_00087 169 83 Op 1 . - CDS 185144 - 185980 474 ## HMPREF0675_4526 hypothetical protein 170 83 Op 2 7/0.000 - CDS 186056 - 187771 1583 ## COG0747 ABC-type dipeptide transport system, periplasmic component 171 83 Op 3 44/0.000 - CDS 187863 - 188894 510 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 172 83 Op 4 44/0.000 - CDS 188891 - 189982 891 ## COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 173 83 Op 5 49/0.000 - CDS 189979 - 190911 947 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 174 83 Op 6 . - CDS 190914 - 191111 197 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 175 83 Op 7 . - CDS 191161 - 192039 506 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components - Prom 192113 - 192172 2.0 + Prom 191997 - 192056 4.0 176 84 Tu 1 . + CDS 192196 - 193764 933 ## HMPREF0675_4518 glycosyl hydrolase family 20, catalytic domain protein - Term 193450 - 193488 -0.5 177 85 Op 1 . - CDS 193724 - 194950 507 ## HMPREF0675_4517 hypothetical protein 178 85 Op 2 . - CDS 194947 - 198030 1920 ## COG0383 Alpha-mannosidase - Prom 198072 - 198131 2.5 179 86 Op 1 . + CDS 198383 - 198589 85 ## PPA1458 hypothetical protein 180 86 Op 2 . + CDS 198679 - 199689 708 ## COG1609 Transcriptional regulators 181 87 Op 1 38/0.000 - CDS 199710 - 200606 620 ## COG0395 ABC-type sugar transport system, permease component 182 87 Op 2 35/0.000 - CDS 200603 - 201559 741 ## COG1175 ABC-type sugar transport systems, permease components 183 87 Op 3 . - CDS 201639 - 202949 1310 ## COG1653 ABC-type sugar transport system, periplasmic component - Prom 203032 - 203091 2.4 + Prom 203107 - 203166 4.0 184 88 Op 1 . + CDS 203212 - 203772 175 ## PROTEIN SUPPORTED gi|170758590|ref|YP_001787770.1| ribosomal protein L32 family protein 185 88 Op 2 . + CDS 203836 - 204027 345 ## PROTEIN SUPPORTED gi|213961304|ref|ZP_03389583.1| ribosomal protein L32 186 88 Op 3 4/0.000 + CDS 204038 - 204778 279 ## COG0571 dsRNA-specific ribonuclease 187 88 Op 4 . + CDS 204771 - 205541 368 ## COG0266 Formamidopyrimidine-DNA glycosylase + Term 205652 - 205685 0.1 188 89 Tu 1 . - CDS 205565 - 205780 123 ## HMPREF0675_4506 hypothetical protein 189 90 Op 1 . - CDS 205938 - 206279 302 ## HMPREF0675_4505 HicB family protein 190 90 Op 2 . - CDS 206279 - 206491 141 ## HMPREF0675_4504 hypothetical protein 191 91 Op 1 . + CDS 206885 - 207544 524 ## PPA1448 GtrA-like protein 192 91 Op 2 . + CDS 207604 - 207771 97 ## HMPREF0675_4501 hypothetical protein 193 91 Op 3 . + CDS 207822 - 209012 660 ## PROTEIN SUPPORTED gi|163762490|ref|ZP_02169555.1| ribosomal protein L28 194 91 Op 4 . + CDS 209023 - 210204 917 ## COG0627 Predicted esterase 195 91 Op 5 1/0.050 + CDS 210280 - 211866 1549 ## COG0541 Signal recognition particle GTPase 196 91 Op 6 . + CDS 211943 - 213106 1031 ## COG1228 Imidazolonepropionase and related amidohydrolases 197 92 Op 1 19/0.000 + CDS 213297 - 213740 746 ## PROTEIN SUPPORTED gi|50842922|ref|YP_056149.1| 30S ribosomal protein S16 198 92 Op 2 12/0.000 + CDS 213743 - 214021 174 ## COG1837 Predicted RNA-binding protein (contains KH domain) + Term 214035 - 214105 4.3 199 92 Op 3 30/0.000 + CDS 214147 - 214668 211 ## PROTEIN SUPPORTED gi|163796730|ref|ZP_02190688.1| 50S ribosomal protein L19 200 92 Op 4 . + CDS 214671 - 215390 378 ## COG0336 tRNA-(guanine-N1)-methyltransferase 201 93 Tu 1 . - CDS 215325 - 215561 120 ## 202 94 Op 1 . + CDS 215601 - 216251 588 ## PPA1439 succinate dehydrogenase cytochrome b-558 subunit 203 94 Op 2 36/0.000 + CDS 216251 - 218278 2036 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 204 94 Op 3 . + CDS 218275 - 219048 650 ## COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit + Term 219074 - 219117 11.1 + Prom 219131 - 219190 1.7 205 95 Op 1 5/0.000 + CDS 219299 - 219652 588 ## PROTEIN SUPPORTED gi|50842915|ref|YP_056142.1| 50S ribosomal protein L19 + Term 219670 - 219708 7.1 + Prom 219687 - 219746 1.8 206 95 Op 2 4/0.000 + CDS 219823 - 220647 459 ## COG0681 Signal peptidase I 207 95 Op 3 . + CDS 220656 - 221297 333 ## COG0164 Ribonuclease HII 208 95 Op 4 . + CDS 221294 - 221605 398 ## HMPREF0675_4486 protein often found in Actinomycetes clustered with signal peptidase and/or RNaseHII 209 96 Op 1 2/0.000 + CDS 221873 - 222292 356 ## COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase 210 96 Op 2 2/0.000 + CDS 222340 - 223812 369 ## COG0606 Predicted ATPase with chaperone activity 211 96 Op 3 . + CDS 223809 - 224942 260 ## COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake 212 97 Tu 1 . - CDS 224917 - 225444 187 ## COG0350 Methylated DNA-protein cysteine methyltransferase - Prom 225481 - 225540 80.3 213 98 Tu 1 . - CDS 225552 - 225767 256 ## HMPREF0675_4482 CsbD-like protein - Prom 225816 - 225875 2.8 214 99 Op 1 . - CDS 225984 - 226598 637 ## PPA1425 putative lysophospholipase 215 99 Op 2 . - CDS 226579 - 227121 416 ## COG2267 Lysophospholipase - TRNA 227695 - 227783 56.4 # Leu GAG 0 0 216 100 Op 1 . + CDS 227941 - 229287 918 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 217 100 Op 2 . + CDS 229290 - 230597 911 ## COG0372 Citrate synthase + Term 230672 - 230715 1.3 - Term 230512 - 230542 -0.5 218 101 Tu 1 . - CDS 230609 - 231577 650 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 219 102 Tu 1 . + CDS 231786 - 232367 275 ## HMPREF0675_4474 hypothetical protein 220 103 Op 1 . + CDS 232652 - 233164 299 ## HMPREF0675_4473 hypothetical protein 221 103 Op 2 . + CDS 233233 - 233904 542 ## COG3201 Nicotinamide mononucleotide transporter 222 103 Op 3 3/0.000 + CDS 233971 - 234237 215 ## COG0140 Phosphoribosyl-ATP pyrophosphohydrolase 223 103 Op 4 . + CDS 234295 - 235149 766 ## COG0040 ATP phosphoribosyltransferase + Term 235294 - 235355 0.9 224 104 Tu 1 . - CDS 235211 - 235828 362 ## PPA1416 hypothetical protein 225 105 Op 1 . + CDS 235895 - 236368 233 ## HMPREF0675_4468 hypothetical protein 226 105 Op 2 . + CDS 236328 - 236534 130 ## 227 105 Op 3 . + CDS 236557 - 237363 748 ## COG0290 Translation initiation factor 3 (IF-3) 228 105 Op 4 . + CDS 237452 - 237670 345 ## PROTEIN SUPPORTED gi|50842894|ref|YP_056121.1| 50S ribosomal protein L35 229 106 Op 1 4/0.000 + CDS 237774 - 238145 609 ## PROTEIN SUPPORTED gi|213961272|ref|ZP_03389551.1| ribosomal protein L20 230 106 Op 2 . + CDS 238147 - 238968 181 ## PROTEIN SUPPORTED gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 231 107 Tu 1 . - CDS 238907 - 239092 59 ## 232 108 Op 1 35/0.000 + CDS 239091 - 240200 897 ## COG0016 Phenylalanyl-tRNA synthetase alpha subunit 233 108 Op 2 . + CDS 240197 - 240772 692 ## COG0073 EMAP domain 234 108 Op 3 . + CDS 240782 - 242716 1291 ## COG0072 Phenylalanyl-tRNA synthetase beta subunit 235 109 Tu 1 . - CDS 242958 - 244460 832 ## COG0502 Biotin synthase and related enzymes 236 110 Op 1 . + CDS 244137 - 244748 476 ## COG1309 Transcriptional regulator 237 110 Op 2 . + CDS 244844 - 245392 312 ## COG1438 Arginine repressor + Term 245404 - 245439 -0.7 238 110 Op 3 . + CDS 245476 - 246732 676 ## PROTEIN SUPPORTED gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 + Term 246751 - 246797 15.4 Predicted protein(s) >gi|302034492|gb|GL383259.1| GENE 1 155 - 1714 872 519 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4689 NR:ns ## KEGG: HMPREF0675_4689 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 519 1 526 526 916 98.0 0 MVGEARVLPPGWSQPAGQYEGWNGQYPQQGWDGQNPQQGWDPTQYPQQGWQTGQNPQGWD SHQGWDPNLQGWDGQPGAQIDDVQSTPAAAIGQGDVDNLQNDPNYYFDSNGERGPGWYGP SGAFFPATQAYEPNAQPDLSYMAEGTPAGTTGTDHEHISEPVGGIPFSDAPQPTRKSQYW IIAVAAILVVAIGAGIFFYLRSKSGATKAVPATASKPAASASKSPTPEVTVTSTSTATAG ATSVAPASATPMPSVPNDASTTPSPDLVRQLFNAPDAQVQWVSLAADGQNAAVAYASTFN INGKSAGPNGGHLVMRKNGSHWEPLSQGGVIVDDNDCDAMLKTLGDKAAVAASQVMNNKQ CDAAIVYDLAKASPIRLGEMAGVGPLNLDKSTSELASTIHVIPDGVGDGCTRNPTAYSRY GDLLGGVWTQGGKAQAYLFTGGNNATSNGARIGITEAQLRSDYSKLKLIDVSTEFSGIKL GFQKALAYSYHGKEIDYLFNGGKVVAYMIRNSDFSPTTC >gi|302034492|gb|GL383259.1| GENE 2 1656 - 1982 126 108 aa, chain - ## HITS:1 COG:no KEGG:PPA2356 NR:ns ## KEGG: PPA2356 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 99 1 99 608 160 100.0 2e-38 MTDDGSSKEKYPDDSHSGYNDAELTPEQPDSNSGQARDDEPAQELSQDREATQQFSTNPD DYDNQQYPQQSDYQNAQYPQDWNQYPQSGDGWGSESTAPRMEPASRPV >gi|302034492|gb|GL383259.1| GENE 3 1997 - 3031 637 344 aa, chain - ## HITS:1 COG:L100350 KEGG:ns NR:ns ## COG: L100350 COG1472 # Protein_GI_number: 15672482 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase-related glycosidases # Organism: Lactococcus lactis # 10 337 67 396 403 150 29.0 3e-36 MNPRAVEIAKKLSPEQRAGQCILVGVVPSDSPEYITNLIDTQCLAGIFLLGHWTSRSKLE AMLSAVNHVSPQGIKPIIATDHEGGEIQNIRVPGVDHLPSQEALARMSPAKVQAVVTTGA RQLAKLGVHMVFSPVAGVIDPRLGVRNKPIAKHHRGFGTDPHLCGQYSAAVVAGHRKAGI ISTTKHFPGIGRITEDTDFKSAGITDDKPPRHDRYLESFRMAFDAGSEAVMIASAYYSKI DPGTLGLFSSKIMTDMLRGDFGYQGLIVSDDLGSSVSVFSVDGGHRASKFVSAGGDLAIT ADPLLAGPMIRALTSTTTSASGKKRLVDAASHVINVKLAHSLTK >gi|302034492|gb|GL383259.1| GENE 4 3288 - 4721 300 477 aa, chain - ## HITS:1 COG:Cgl0042 KEGG:ns NR:ns ## COG: Cgl0042 COG0515 # Protein_GI_number: 19551292 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Corynebacterium glutamicum # 1 341 1 346 469 127 32.0 4e-29 MSDEGVMGKSTTKRVGSHYVLDDVLGRGSMGTVWRGHDLNDGSPCAIKILNPTLTTDKGA TRRFIDERDIFMSVDDDAVVRVTDMVVESSTFAIVMELVDGPDLAQVLKSLPDHRLDQGT AVSLGIEVCQTLAAIHRVGIRHLDIKPANILIEDPENVSGARITDFGVSEVVAFHGPREV VGTPYYQAPEVAAGWTPTAASDLYSFGVTLYEILAGHMPFQANSAGNLLRNQPPPAIPGV DPRLWNTILTCLAPDPSQRPDSAEVLASELRSWRNGEQPVRLVSRRSQPVRPTPQPMPRP RLVRSAPSAISGATPPAPSATSVATQQRGSGWVIALLAVLVLVGAGVFFYVKGMPGSHSD AAPQPTQAPISTSTPEVRPTRTVTAHATVTTMSSPIQIQLPGGAVECGQGAWIANPRTTC PLALEVVRSVPANHPASFAIDAQDPRTGKSRHFSCNTVGQYVDCGSQDLEVYLVIPG >gi|302034492|gb|GL383259.1| GENE 5 4782 - 6200 1107 472 aa, chain - ## HITS:1 COG:ECs5186 KEGG:ns NR:ns ## COG: ECs5186 COG1113 # Protein_GI_number: 15834440 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Escherichia coli O157:H7 # 9 459 13 463 470 525 61.0 1e-149 MTVKNQHSAAEEQHLRRSLSNRHIQLIAISGAIGTGLFMGSGKSISTAGPSIVVAYLVIG AMLFFVMRAMGELLLHNLQWKSFQDFAADLLGPWAGFFLGWTYWLCWVVTGMADVIAITS YWSFWTHDRAWAFILTATTLLLLLALNLLTVKLFGELEFWFALIKIVAILTLIAVAIVLI VMGFTSASGYKASVSNLWSYGGFAPRGWSGFFGGFQIAVFAYVGIELVGTTSAETANPPK TMPKAINAVPVRVLVFYVAALLAMMCVTPWNLIQTDSSPFVQMFGLIGFTAAAGIMNFVV LTSAASSANSGVYSTSRMLYGLAHKGMAPRAFGKLSRHGVPGWGLFCTIILIGSALILAA KDSVMGAFTLVTTVSAVLFVFVWSMILISHIVHVRRNPQAHAKSIYPMPGASFMPWVVLA FFVFVIVLLTGADDTLQALLAAPIWFVVLGIVWAIVRRRSHHDDLETDLPAD >gi|302034492|gb|GL383259.1| GENE 6 6627 - 7244 542 205 aa, chain - ## HITS:1 COG:ML0427 KEGG:ns NR:ns ## COG: ML0427 COG1949 # Protein_GI_number: 15827135 # Func_class: A RNA processing and modification # Function: Oligoribonuclease (3'->5' exoribonuclease) # Organism: Mycobacterium leprae # 1 197 1 198 215 221 55.0 7e-58 MKDMLVWIDCEMTGLDLAHDGLIEVAALVTDGQLNVQGEGVDVIIKPEPQWLDHMNDFVR NMHTTSGLLAELDKGLTMAQAQDQVLDYIRTYVPQAGKAPLAGNTIGTDRSFLAKDMPKL ESYVHYRNVDVSSIKELARRWYPRAFGHSPEKQGNHRALADIQESIEELMYWREVLMVPS PGPETTRCDEIAAKYQGFLTGAGRD >gi|302034492|gb|GL383259.1| GENE 7 7299 - 8510 760 403 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4682 NR:ns ## KEGG: HMPREF0675_4682 # Name: not_defined # Def: transporter, major facilitator family protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 403 1 403 403 620 99.0 1e-176 MTDSTHADPATPPVKWSSIIVSAYLPTLMSSLGYGAVIPLIPLTAVHIGASAALAAAIAA LVGIGQIIGDVPAGWLVTKIGEKWSLVIAMLIDAVALVSMGLVHHLGLLAVAVFVNGMAG AVYGIARQNYLTVAIPYRYRARALSTLGGVFRVGWFVGPMAGSWILREASMSWAYGFASV ASVLAAAVTTVMPDLPPVDVPQTAVDDAPTKISTWTIAKQNSKVLWTTGLGVTALMVVRS ARRSLLPLWCHANGLSPATTDLIYAWSMAADVLLFLPGGALMDRFGRWWVAVPSIFIQAL ALLTLPLAHTATTIGIVALAIGIGNGASSGIVMTLGSDASPNIGRPQFLAAWRLLSDTGS AMGPIVVTLVTLAWPLSAASIVMSIIGLVGSYWMGRWVPHGKR >gi|302034492|gb|GL383259.1| GENE 8 8765 - 10075 1039 436 aa, chain + ## HITS:1 COG:no KEGG:PPA1640 NR:ns ## KEGG: PPA1640 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 436 1 436 436 822 100.0 0 MSYVAPTPIARRPWWQRALRNPWFWVLLALVLISAACMVHTYVIVHADTEVEQQGQKGVI PGITNQSLKLAFHYAWPTAAVWSAIFIFLDRFRTRHLHVWFLCFCWGACVATWISMHVNT WMAGMLSVTGGVDPASGAGPAVYSAPFVEESCKALVLFALAIGMGRRMTSVVQTVSMAGL SAIGFAFVENIMYYARADNYARVTASAGDPKQAVMELVLLRGVYASFGHPLFTSMTGIGL ALGLRSRSRLVRIFAPTTGFVMAVVGHMLFNGFSSVLPMAILKKLWFVALGIVASVVVFL VVRTVREGRMIRYRLEDYVKGGWLPNSDADTLSALRRRQWAALVALSQGPRRWWHTLEFL RVGTDLAYLRDAIVRGLDDDPGPRQIELINRMNVLRPAAITVARGAKLSKPRLPAFLKRR RNQPVNNELQWAPPQA >gi|302034492|gb|GL383259.1| GENE 9 10098 - 11963 1145 621 aa, chain + ## HITS:1 COG:no KEGG:PPA1639 NR:ns ## KEGG: PPA1639 # Name: not_defined # Def: putative ABC transporter # Organism: P.acnes # Pathway: not_defined # 1 621 1 621 621 1125 100.0 0 MNTEQILLSLTDLRHNLRQAQFPLDLPEAITQAGLARRIANQLNDYILPRLETIDAPLLA VVGGSTGAGKSTLVNSLVGRMVTQPGVIRPTTTSPVLVHHPDDAFWFDGDRVLPTLVRSQ VASNDASSLQLVAEPDIPRGLAILDAPDIDSVVTRNRDLAAQLLQAADLWVFVTSAARYA DAVPWDFLNEAQERHASIAVVCDRVPVEAMREVPADLGRLMTERGLADSPLFAVPETKTN AEGALPDQAVAPLRFFLSSLAQNQQKRREVIASTLSGAIGSVCERASYVAAGLEAQAVAA SRLYEDAQSIMAESYRSIAAQSADGTLLRGEVLARWHEFVGTGEFMRAMEAKVSWFRDRV VQAFKGAPPEVEKVSVAVESGLESLILAQAQGGCERIESVWHTDPAGRSVLEGADEDLSR PSQGFDEAVSRMVRDWQTDVMELVAGEGMNKRSKARFMAFGVNGVSVALMLVVFAHTGGL SGAEAGIAGGSAIVAQRLLEALFGDDAVRRLAKAAKNQLDARVEGLLANEVTRYRAVLDS SGVDTEVPSRIRASIEEIRQAQDAPEPLSDQVTIRTRREDPEVEASQAREIGQVQADMPV LDAEIVKPAAVLDPEPCQEER >gi|302034492|gb|GL383259.1| GENE 10 11960 - 13570 845 536 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4678 NR:ns ## KEGG: HMPREF0675_4678 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 536 1 536 536 932 100.0 0 MRRRRVDLAERIDLLSRAVDLSEGRIPDDVVVQARAVVERADQRCRIGGDHTVIALAGAT GSGKSSTFNALASAELTDPGVRRPTTSKATAAVWGTESAEALLDWLNVPRRHHMGSGDTL DGLVLLDLPDHDSVCIEHRLEVDRLVEMVDMIVWVVDPQKYADAALHTRYLTPLASHSEI MTVVLNQVDHLDKEQRKNCLRDLRRLLDSEGLGKAKMMAISATTGEGVDDMRVALARAVR AKKAQVARLHADLDNVSQRLAEATGDAAGQVSQDSVDQLIAALCTAGGVEPVVEATREAY RRRGHRATGWPVTAWVSRLRPDPLHRLHLDLGSTRKKGRARSTEPTDVQRSALTARVGVA GAKIDTAVRSLASEASEGLPRSWADVVRAASLSHRTDLPDDIDRAVASTDLGVHHGTGWW KLVTVVQWILMIIVVAGLAWLAVDALSAYFQFRLPPVRWHHFPVPTLMVVGGVIAGVVVS LLCQAGVQAGARAAARYARSELRANLTDVAWQSVVGPVNAELDHHDEVVKIVAKAS >gi|302034492|gb|GL383259.1| GENE 11 13689 - 14150 281 153 aa, chain + ## HITS:1 COG:Cgl2925 KEGG:ns NR:ns ## COG: Cgl2925 COG0629 # Protein_GI_number: 19554175 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Corynebacterium glutamicum # 2 113 5 120 225 65 37.0 3e-11 MDANVSFTGNLGTDVEMKIGEGWRGARFRVAHTPRVMRQGEWVDGTTTWMSVHVYGRLAD NCHVSLRKGDPVMVTGRLRTRSWIDDEGSHEQLIVVAHNVGPDLSRLPATCRRPEKRAEA PLGDDRVVRYHDSPDGVDEDAEVVDDDVEMVGS >gi|302034492|gb|GL383259.1| GENE 12 14272 - 15957 1854 561 aa, chain + ## HITS:1 COG:MT2552 KEGG:ns NR:ns ## COG: MT2552 COG0488 # Protein_GI_number: 15842003 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Mycobacterium tuberculosis CDC1551 # 1 560 1 557 558 833 76.0 0 MTEFIYTMHNVRKAVGDKVILDNVTLSFFPGAKIGVVGPNGAGKSTMLKLMAGLDKPNNG DANLAKGATVGILLQEPPLTEDKTVRENVEEAVGDIKAKLARFEEVSAEMANPDADFDAL MAEMGELQTELDNANAWDIDTRLEQAMDALQCPPGDTPVDVLSGGERRRVALCKLLIEQP DLLLLDEPTNHLDAESVNWLEGHLKSYPGAVLAVTHDRYFLDHVAEWICEVDRGQLHPYE GNYSTYLDTKRKRLQIEGKKDAKRAKILEKELEWVRSSPKARQAKNKARLARYEEMAAEA ERNRKIDTAEINIPPGPRLGNVVLEAEHLSKGFGDRILIKDLSFTLPRAGIVGVIGPNGV GKTTLFKTIVGLEKADSGSLKVGETVSFSYVDQNRTGIDPEKNVWEVVSDGLDYIKVANF EEPSRAYVASFGFKGPDQQKPAGVLSGGERNRLNLALTLKQGGNVLLLDEPTNDLDVETL SSLEDALLEFPGCAVVVSHDRWFLDRIATHILAWEGEDEDGIPRWFWFEGNFADYEANKI ERLGPEAARPHASKHRRLTRD >gi|302034492|gb|GL383259.1| GENE 13 15990 - 16433 136 147 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|315079630|gb|EFT51623.1| ## NR: gi|315079630|gb|EFT51623.1| conserved domain protein [Propionibacterium acnes HL053PA2] # 1 147 1 147 147 244 100.0 2e-63 MHPTSTVGVVTAPAAQTIGAILIPIGIMALRHHHRVDITTGIIIAAALVLIPWMILPVRT PAARRNSHQVHAAGYVRHCPLVRRTCRPTTRANAGRQPASGMGRRSRLDPASLHRGAHDT GLTGPAPHEPRLNGSGCNGTQLVSVPG >gi|302034492|gb|GL383259.1| GENE 14 16455 - 16796 360 113 aa, chain - ## HITS:1 COG:L128255 KEGG:ns NR:ns ## COG: L128255 COG1695 # Protein_GI_number: 15674041 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Lactococcus lactis # 8 113 5 110 120 77 38.0 5e-15 MDDNHWPSEWQRGVLDLCVLHILADGPTYGYSIAARLTDAGFADVKGGTLYPLLKRLEGA GLVDVEWRPGEAGPGRKFYLINTAGRQRLMALTASWQRYSTTVTRLLDEGSLS >gi|302034492|gb|GL383259.1| GENE 15 16878 - 19751 1217 957 aa, chain - ## HITS:1 COG:Cgl2262_1 KEGG:ns NR:ns ## COG: Cgl2262_1 COG0277 # Protein_GI_number: 19553512 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Corynebacterium glutamicum # 33 511 30 515 544 370 42.0 1e-102 MTATTDILQDFRSTLRGLDASALEILDDSRLARALYSSDASIYRVVPTAIAHPRSTDELS ALVTAASQVGLPITARGAGTTCAGNAVGAGLVIDTSAHLNRILSLDPQARTAVVEPGVVQ DWLQHAGVRHRLRFGPDPSTSTRCTIGGMIGNNACGPRALGYGRTGDNLVDVDLLTADGH VTTLRRGDFAVPFTQRLVDLTDASLATIRTEFATFSRQVSGYSMEWLLPERGRNFPAFIA GTEATLGIVTRATVQLVREAAYGMTVALGYPSMPEAADAVTALLPFSPVACEGFGRRIVD VVSRAGRPVPDLPRGDGWMFVELRGDDETEVASRARKLVAASGCLDGWVVSDPGQAAALW KIRADGAGLAGVSLNKPAWAGWEDSAVPANDLGAYLRDFEALLDDHGLHGLPYGHFGEGC LHCRIDFPLDQPDGPRRYRSFVTEAARLVARHGGSVSGEHGDGRARSALLDLMYSPDALT LFSKVKAILDPDNLFNPGILVNPAPVEANIRTHESALSPMTISHPEFAADVHRCTGVGKC IAPTAPGGVMCPSYQASGLEVDSTRGRASVLKEMVNGTLINGWDSPEVERALDLCMACKG CARDCPTGIDMASYRSTVLDEKYRHRLRPRSHLTMGLLPMWERLLNRIPGAPSLANAVLS IPVFARLARWTAGVDQRRPLPRFQPSARLASPQAAPAKEIVADPETSPSSASTSRFQTRC DHDKGDVVIWVDSFSDMLEGSDLSAVVTVLADAGYHPRVLTNDICCGLTWITTGQLDGAR RRLRAGLDVLTPLSDANVPAVGLEPSCTTVWRDDALRLLSDDPRVRRVARNMHTVAEMLE AANWTPPSLAGHTIVAQPHCHHASILGFGPDKRLLEAAGATVTVVSGCCGYAGNFGVEKG HYDFSVKVAHNDLLPAIEEAGPQAIILADGFSCRRQVSDLIGRRALTLSEVFASHVK >gi|302034492|gb|GL383259.1| GENE 16 19756 - 20286 337 176 aa, chain - ## HITS:1 COG:Cgl1145 KEGG:ns NR:ns ## COG: Cgl1145 COG1846 # Protein_GI_number: 19552395 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Corynebacterium glutamicum # 33 173 6 147 162 83 34.0 2e-16 MSQGGSGRSTNEGATKTCDDVGSQMEKSAATAWLSIEQQRVWRAWLLGSARITSRLSQEL RRHDLELCEYEILASLSEADDYAMRMSVLATEVHQSRSRLTHAVERLEARGLVTREPDVR DRRGVVARLSPTGMDLLRQAAPNYVRTVRHIVVDPVDPEDFAAMGRAMRAVLSVPD >gi|302034492|gb|GL383259.1| GENE 17 20336 - 20542 61 68 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313773633|gb|EFS39599.1| ## NR: gi|313773633|gb|EFS39599.1| hypothetical protein HMPREF9574_00027 [Propionibacterium acnes HL074PA1] hypothetical protein HMPREF9580_00958 [Propionibacterium acnes HL087PA2] hypothetical protein HMPREF9587_01317 [Propionibacterium acnes HL025PA1] hypothetical protein HMPREF9589_00331 [Propionibacterium acnes HL059PA1] hypothetical protein HMPREF9593_00229 [Propionibacterium acnes HL046PA2] hypothetical protein HMPREF9604_00021 [Propionibacterium acnes HL036PA1] hypothetical protein HMPREF9605_01268 [Propionibacterium acnes HL036PA2] hypothetical protein HMPREF9612_00428 [Propionibacterium acnes HL063PA2] hypothetical protein HMPREF9591_00604 [Propionibacterium acnes HL086PA1] hypothetical protein HMPREF9597_02094 [Propionibacterium acnes HL005PA4] hypothetical protein HMPREF9600_01129 [Propionibacterium acnes HL050PA3] hypothetical protein HMPREF9609_02670 [Propionibacterium acnes HL027PA1] hypothetical protein HMPREF9613_02211 [Propionibacterium acnes HL002PA1] hypothetical protein HMPREF9614_00325 [Propionibacterium acnes HL002PA2] hypothetical protein HMPREF9618_01302 [Propionibacterium acnes HL082PA1] hypothetical protein HMPREF9564_01162 [Propionibacterium acnes HL053PA1] hypothetical protein HMPREF9566_01520 [Propionibacterium acnes HL045PA1] hypothetical protein HMPREF9594_01655 [Propionibacterium acnes HL005PA1] hypothetical protein HMPREF9596_00227 [Propionibacterium acnes HL005PA3] hypothetical protein HMPREF9565_00316 [Propionibacterium acnes HL053PA2] hypothetical protein HMPREF9569_01157 [Propionibacterium acnes HL078PA1] hypothetical protein HMPREF9610_01414 [Propionibacterium acnes HL027PA2] hypothetical protein HMPREF9583_02396 [Propionibacterium acnes HL038PA1] hypothetical protein HMPREF9590_00022 [Propionibacterium acnes HL059PA2] hypothetical protein HMPREF9592_00647 [Propionibacterium acnes HL046PA1] hypothetical protein HMPREF9602_00234 [Propionibacterium acnes HL030PA2] hypothetical protein HMPREF9337_01686 [Propionibacterium acnes HL096PA3] hypothetical protein HMPREF9570_01880 [Propionibacterium acnes HL043PA1] hypothetical protein HMPREF9568_00888 [Propionibacterium acnes HL013PA2] hypothetical protein HMPREF9584_02313 [Propionibacterium acnes HL092PA1] hypothetical protein HMPREF9581_01044 [Propionibacterium acnes HL087PA3] hypothetical protein HMPREF9579_01339 [Propionibacterium acnes HL087PA1] hypothetical protein HMPREF9588_00847 [Propionibacterium acnes HL025PA2] # 26 68 1 43 43 77 100.0 4e-13 MSICLTIKHRRKVFCRGCEELPLHSMRLVVTGTAHQLTLTSIKSNFCHAIACFIGQSPQL PISTMGGC >gi|302034492|gb|GL383259.1| GENE 18 20516 - 22345 1174 609 aa, chain + ## HITS:1 COG:Cgl2244 KEGG:ns NR:ns ## COG: Cgl2244 COG1022 # Protein_GI_number: 19553494 # Func_class: I Lipid transport and metabolism # Function: Long-chain acyl-CoA synthetases (AMP-forming) # Organism: Corynebacterium glutamicum # 1 593 28 613 615 296 33.0 1e-79 MLDRQADAHPNRIAFLTPSGPDDEPNTWLPMTFAEFRRQAHEVAAGLMEFGLPREGRVAL LSGTRTEWIIADMAISCAGGATTTIYPNSGPEEASFILVDSHSSILFVDSTAQVAKIQGR PEVDAVVRHIISFVDDSEQTGVSDDRLTTMADVIAHGRRRLAAEPELVRRMIDSIEPDDL CTLIYTSGTTGTPKGVELTHQAWTYMGQAWKSLDMFRGGDIHLLWLPLSHAFGKCLIAIC VEIGITQAIEPRIPRLARSLGEVKPRVMCGVPRIFEKIRAGVMTAYPQGRLASRVSRWAF ATGRDVQQYRRAGDRLPVTVAAKLKIADALVFSTLRRKLGGIEFMICGGAKLSEQVQQWF FSAGIPIVEGYGATEIGAVAFFSGPTAIRSGTVGPVAPGCLARIAEDGEVLVSGPIVARG YHNLPEKTAKAFTDGWFHTGDIGEFDEKNYLRITDRKRDLFKTSGGKYVAPQKVEATLMA NCPYLSNAVVLGEGHKYAVALLTLDRDALMTWGKRHGKADASYAELTADPRVRRSIQWYV DRANSRLERWETVKKFAILDHDLTEDSHSVTTSLKVRRGVVAEKYAYLLDEMFADENDQP GVAKGSDAS >gi|302034492|gb|GL383259.1| GENE 19 22342 - 23187 323 281 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4670 NR:ns ## KEGG: HMPREF0675_4670 # Name: not_defined # Def: acyl-CoA thioester hydrolase, YbgC/YbaW family # Organism: P.acnes_SK137 # Pathway: not_defined # 1 281 1 281 281 547 100.0 1e-154 MTGAVVVDIPLRWSDMDAQGHVNNVRISELVQESRNQAFYTNGAQEMLDTGIVVVSQDVE FLAPFVVDGSPLRVAVGCSQLGAARTVLDYRAWHHDVEVARARGTICPFDFATGRPRRLT DGERGAFESMKVESQQWKPIKVVDVSEAGDFIEVPIRWSDVDRQGHVNNVSLAGYLQEAR ILATTSWSPGMRRAGNYLWVVVRQDIRYRRQVLPTQRSCRVHTALTRLGTSSMTLAGSIA TEEGSALDAATVLVCVDPKTGASVPIDDQTRQALSAYLVTV >gi|302034492|gb|GL383259.1| GENE 20 23195 - 23902 367 235 aa, chain - ## HITS:1 COG:Rv2471 KEGG:ns NR:ns ## COG: Rv2471 COG0366 # Protein_GI_number: 15609608 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Mycobacterium tuberculosis H37Rv # 3 216 343 532 546 146 42.0 3e-35 MGASATWVLGNHDNVRPVSRYGKEISGLDFSDPSAPHAQFHGTPTDVALGRCRARAAAML ELALPGGAYIYQGEELGLPEVEDLPEETLQDPTWKRSGHTDRGRDGCRVPMPWSGSNAPY GWSTNANTWLPMPSNWAEWTVESEQNDSSSFFTLYRTLLAERHANPALGAGTMTWNESSD EVLDFSREPGFQCIVNFGAEKVTVDADAVIASSIPLDTQGKTVSVGRDQAVWLRV >gi|302034492|gb|GL383259.1| GENE 21 23957 - 24868 862 303 aa, chain - ## HITS:1 COG:Rv2471 KEGG:ns NR:ns ## COG: Rv2471 COG0366 # Protein_GI_number: 15609608 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Mycobacterium tuberculosis H37Rv # 5 299 26 317 546 309 54.0 4e-84 MTTSPTINDWWKSAVVYQVYPRSFADSNGDGIGDVRGIIDHLDHLVTLGVDALWISPWYP SPMADGGYDVSDYCDINPDFGTLADADALVAQAHELGLRVIIDLVPNHSSQEHPWFKKAL AAAPGSPERDRYIFRDGRGENGELPPNNWPSVFGSGAWERITEPDGTPGQWYLHFFDVSQ PDWNWENSDVLEEFDRVLRFWFDRGIDGFRIDVANSLVKESGLPDLPENEKFGELVGDSP MWDQPELASIQRRWRAIADEYADTPEGPRMFVAEAYLPHDRLVRYLESDRLHTSFNFEFL ISA >gi|302034492|gb|GL383259.1| GENE 22 24944 - 26392 985 482 aa, chain - ## HITS:1 COG:Cgl1417 KEGG:ns NR:ns ## COG: Cgl1417 COG0362 # Protein_GI_number: 19552667 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconate dehydrogenase # Organism: Corynebacterium glutamicum # 9 481 8 484 484 514 56.0 1e-145 MSDTAPQTAEVGVIGMAVMGSNLARNMARKGFRVAIYNRTASRTDEVIAGHGNEGTFLPF HDLANFVASLERPRRVVMMVKAGCGTDAVIKEITPLLQPGDVLVDGGNAYFGDTRRREEE IRPTGIHYVGTGISGGEVGALEGPSIMPGGSKESYEIIGPVLEKISAHVDGEPCCAWMGT DGAGHFVKMVHNGIEYADMQFIGEAHSLLRAAGLTNAEAADAFESWNHGDLNSYLVEITS RVLRAKDPRNPDTDLLDVIRDEAGMKGTGTWTVQTALELGVDVSTISEAVFARSVSSAMP LRTVGQHVLAGPEHTITVEDRQTFLTDVRDALWSAKVVAYAQGLDEIRTAAAEYNWEVDM GQIASIWRDGCIIRARLLQRIRDEYAAGDLVSLLEAPSVKAELARCQQAWRRVVACAVEA GVPVPGFSSALGYYDQVRAPRLNAALTQGLRDLFGAHTYRRVDDEGSWHLNWSGDGREVR AN >gi|302034492|gb|GL383259.1| GENE 23 26385 - 26522 56 45 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313793873|gb|EFS41897.1| ## NR: gi|313793873|gb|EFS41897.1| hypothetical protein HMPREF9575_00166 [Propionibacterium acnes HL110PA1] hypothetical protein HMPREF9616_01132 [Propionibacterium acnes HL007PA1] hypothetical protein HMPREF9597_02099 [Propionibacterium acnes HL005PA4] hypothetical protein HMPREF9565_00311 [Propionibacterium acnes HL053PA2] hypothetical protein HMPREF9569_01162 [Propionibacterium acnes HL078PA1] hypothetical protein HMPREF9590_00027 [Propionibacterium acnes HL059PA2] hypothetical protein HMPREF9601_00840 [Propionibacterium acnes HL030PA1] hypothetical protein HMPREF9568_00893 [Propionibacterium acnes HL013PA2] hypothetical protein HMPREF9584_02308 [Propionibacterium acnes HL092PA1] # 1 45 1 45 45 79 100.0 8e-14 MCLPIALIGVHTRAASHNLTRSALNCIKSESLERWGRDTEEETHE >gi|302034492|gb|GL383259.1| GENE 24 26584 - 26811 252 75 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4666 NR:ns ## KEGG: HMPREF0675_4666 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 75 1 75 75 150 100.0 1e-35 MKSGYSRAHRRYAEAMIDALAFVPMKTLPGWPEAHYSSVHLLMLCVVWPIATAVLFIFVG WGIHRAKGRNSNDPD >gi|302034492|gb|GL383259.1| GENE 25 26887 - 29499 1861 870 aa, chain - ## HITS:1 COG:MT2542 KEGG:ns NR:ns ## COG: MT2542 COG0308 # Protein_GI_number: 15841991 # Func_class: E Amino acid transport and metabolism # Function: Aminopeptidase N # Organism: Mycobacterium tuberculosis CDC1551 # 7 865 1 855 861 658 44.0 0 MFHGGMMSSVNITREEAQQRSQVITAHSSKVLVDLSGRDPNGDPLGEPTETFVSSSTIQF SSTGGQSHLDLIADGVYAADLDGTPLDPAAFSHNRFPFTTEPGTHEITVTALCRYSHSGE GLHRFVDPADGKVYLYTQFEIADARRMYADFEQPDQKMTFELQVIAPTGWTIVSNSPAPE PTEGPWEGMSRWSFEPTLPISTYLTALVAGEYHVDHGTIHTASGEIDADILCRQSITEYL DADRIRTTTQRGFEVYEAEFGYPYPFGKYTQSFVPEFNAGAMENAACITHRDDLLFRSRV TSAAYENRDNTILHELAHMWFGDLVTMKWWDDLWLNESFAEWASHYCQEKIVEKHGGIDP WVSFANQRKTWGYTQDQLPTIHPIAADMIDLDTVEQNFDGITYAKGASTLKQLVAFVGED KFLAGVRTYFAQNAFSNTELKDLLHQLQVASGRDLSSFTEQWLRTPGVNTVRPDYDVDEK GNFTRFDIVQTATEKYPTLRTHRLGVGIYTLTDDHLTRTELLDVDIHDERTPIAALVGHS RGDLVLLNDSDLTYAKVRLDDHSMATLIDRIDALSDPLARALCWSSAWDMCRDAEMRAQD YVTLVGKGLPSETDLTAVTALIRQATTAAISYSNAEDRQEVRDRLVAILATGLRDAMPGS DHQVAYANGLATAATTDAADLLKGWLSGEEVPEGLSIDQGMRWRLVTALARVGRVGEDEI AAELQRDNTISGSEQAAGARAAMPTAQAKQAAWQRATTDDSVPNETYRQLVMQFIQPDQT EVLSPYVDPYLELCKAIDSHEGQWAKAGHAQVQNALMWLFPSTEVIDAAWLNKLEGWVSD NDPGSTVRRVLAERADNARRILRCQEASRG >gi|302034492|gb|GL383259.1| GENE 26 30017 - 32239 1415 740 aa, chain + ## HITS:1 COG:Rv3014c KEGG:ns NR:ns ## COG: Rv3014c COG0272 # Protein_GI_number: 15610151 # Func_class: L Replication, recombination and repair # Function: NAD-dependent DNA ligase (contains BRCT domain type II) # Organism: Mycobacterium tuberculosis H37Rv # 12 737 5 691 691 796 59.0 0 MVDDSTQGGELEASEAGAEARHHWTELAQRILDAQDAYYARDAPTISDAEYDRLMVELKK VEDDHPELRTPDSPTQRVGAPQRITDFAPVKHLERLLSLDNVFTRDELSEWMNRVATAVG KIPNFLCELKIDGLAVDLVYRDGQLVSGATRGDGRIGEDVTANVRTIAAIPRKLTGDDVP RLLEVRGEVFFPVADFTDLNAALIEAGKNPFANPRNAAAGSLRQKDSRVTASRPLSMIVH GIGVLEGHDFPSQGHAYDKLAQWGLPVSPYFKIVEHVDEVHEFVTRWGESRDEASHQIDG VVVKVDDVSLQRKLGATSRAPRWAIAYKYPPEEVNTELLDIRVNVGRTGRVTPYGVMRPV TVAGSTVEMATLHNAFEVKRKGVLIGDTVVLRKAGDVIPEILGPVVELRNGTEREFLMPD HCPSCGAELAYEKNGDKDLRCPNAQGCPSQLHERVFGLASRGALDIEALGWEAAIALTDP ENQRPGDDEVAEELPKRQTAVLSSEAGLFDLQLDDLAEVKVWRRRKVNGGPGPWQLEPYF FTKATAKKPSTPTATTKKMFDELAKAKSQPLWRVLVALSIRHVGPTAARALATHFGSVEA IREASVEELAGVDGVGEIIAESVKRWFEVDWHQEIISRWAAAGVRMADDRDEAPEQTLEG LTVVVTGSLEGFSRDEAKEAIVSRGGKAAGSVSRKTDYVVVGENAGSKETKARDLGRPIL DEAGFRYLLENGPQGITTIG >gi|302034492|gb|GL383259.1| GENE 27 32323 - 33612 900 429 aa, chain - ## HITS:1 COG:MT2489 KEGG:ns NR:ns ## COG: MT2489 COG4552 # Protein_GI_number: 15841935 # Func_class: R General function prediction only # Function: Predicted acetyltransferase involved in intracellular survival and related acetyltransferases # Organism: Mycobacterium tuberculosis CDC1551 # 98 410 63 367 387 115 32.0 2e-25 MAESTSSVQVPDPYRLELVTSDGSRSEAVDNVLRAVALGFHLSQPSDAELEHYAACVEGE QLWTIRQPDPDPEFPNLPVATMDTYPSTINTGHGHLEPATFITDVTVRASHRRRGLLRTL MTNTLTRSKEEGLAFAALTATEGSIYGRFGYGISTRDQSVEIVVDGRFKLNHAPSGTVSM ADPLAIDDLRLKVFSEFHRARRGSHNRQPWHVDYASGRWDPQKGGPNRRVRSIVHHNDDG EPDGVVSYQIDKDFGSQITILDMVATTPDAEVALWEFLASVDLIEMIKAPKVDPATPLPW AVEDPRVVKFTRHIDLGWLRILDVKKAMAVRGWDHQGSVTFHVVDPMGYAEGTWQVDVEA PGAPATVTKVDDSTDAATLDVAALGSLYFGMGRGFSLAAAHRITGTDEQIAAVDRMFSTV DVAHNISEF >gi|302034492|gb|GL383259.1| GENE 28 33679 - 34152 347 157 aa, chain + ## HITS:1 COG:Cgl2369 KEGG:ns NR:ns ## COG: Cgl2369 COG0698 # Protein_GI_number: 19553619 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase RpiB # Organism: Corynebacterium glutamicum # 8 154 3 149 157 171 57.0 5e-43 MTFKPSHVHIGTDHAAFELKEYLVGKLTEAGYQVVDHGAASYDSQDDYPDYCIPCAQAVM ADPGSLGIVLGGSGNGEQIAANKVKGIRAALAYTVEIAELARLHNNANVVSLGGRMQTQE EAWQIVETFLTTDFSHEDRHQRRIDKLIRWEDKGSLG >gi|302034492|gb|GL383259.1| GENE 29 34141 - 34380 199 79 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4660 NR:ns ## KEGG: HMPREF0675_4660 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 79 1 79 79 113 100.0 2e-24 MNASDHGKQHRNHDHRRGHGSILKGDRAMRTRELVEQPEPSGESQMPEPGQEWKTILADL QRRATASHVNNSGQENSPQ >gi|302034492|gb|GL383259.1| GENE 30 34379 - 35278 507 299 aa, chain + ## HITS:1 COG:Cgl2944 KEGG:ns NR:ns ## COG: Cgl2944 COG0266 # Protein_GI_number: 19554194 # Func_class: L Replication, recombination and repair # Function: Formamidopyrimidine-DNA glycosylase # Organism: Corynebacterium glutamicum # 28 296 1 269 269 314 56.0 2e-85 MKLSCLNSLRLFDFHDAMTTYPRGQPTVPEGHVIHRLANAIDLAFAGSRVEVTSPQGRFA ESAAMLDGTVLASAQAWGKHLVVDFDNHRPDHLLHIHLGLIGKLAVEPTVPVVGQVRLRI TDGVTAADLRGPQTCELINDDEWGTVAATIGPDPIRDDADPDVAWDKVRRSSRRISDVLL DQRVAAGVGNIYRAEVLFRHRVDPATPGKQISHSTWLAMWDDLVMLMRAGVESGRIDTVQ PEHTPEAMGRPPRVDHHGGEVYVYRREDQPCLVCNTPVRMVAQGGRHLFWCPRCQRRRH >gi|302034492|gb|GL383259.1| GENE 31 35303 - 36649 487 448 aa, chain + ## HITS:1 COG:no KEGG:PPA1622 NR:ns ## KEGG: PPA1622 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 448 1 448 448 857 99.0 0 MNRVTVSPPWTLVSCQESDHESSWMWTHPCGAVLSVQSREGDVAELVAGITMPPGVDDTD VTVPGPTWTLDQPIPAIVWAAGASGIVVTRGACDDAALTVWRQDMGDCHPVDEGVSLLGA EVALSPGSARMALWRGHPAGAVVEALECLPSWLPCETIVDPPEEMMCRTPDAGILVDGID QTSETIGPLPMGAHDLVIYESRGATRVMIGWSPHVASAVGARVDEIVSSFDPRTVSGPQT WLLMSAVGMRVAPFDALEMAAEGLENVLSRPFGKGDDHVAKLLTCCAAFRLGHRVGNPEL RDEGLRRLWELPIDEPGTFMSRCIASAELAELVPGGVWVNVAVHDGEDPLVRAERAIWTG RFGGRDADEAVWELGAFLPAVSGGPLYVDGHRVPRRRAALAYAMTTVWPEDLTSAFGPMR VGELRQRTARRLLISEHLDDEDLALLTW >gi|302034492|gb|GL383259.1| GENE 32 36793 - 37008 86 71 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNNENTLLAIATHVVRLNTRRNTMSRAAMFISRGMTTTGVDLGFEVDREPVRGRAADAAR VSGTGSDDVTP >gi|302034492|gb|GL383259.1| GENE 33 36917 - 40162 2492 1081 aa, chain + ## HITS:1 COG:Rv1640c_2 KEGG:ns NR:ns ## COG: Rv1640c_2 COG1190 # Protein_GI_number: 15608778 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Lysyl-tRNA synthetase (class II) # Organism: Mycobacterium tuberculosis H37Rv # 593 1078 2 494 495 507 53.0 1e-143 MNIAALLIVLRLVFSRTTWVAIANNVFSLFIFPVDGFGWAGVVVLLVLSDALSRRKRFAW WVSLVVFGLMWLVAAAFFIIVVTEVFIGWPTDTLNDVDLAGYLFNVFSVGWILVALLTHR RDFAAHTVRANLGRAVVVLVGGLLATGFIGWLLVSLTGGVGRPRNRLVHIITRILQGSGA GIAQEPTSPHWVQGVVSFLLAVVLVAALVVILRSQRNIAMMSLSDELRLRRLLDENPADS LGYFALRRDKAVVFSRNGHAAVCYRTEAGVALASGDPVGPVDQWPGAIDAFLEVAHTYGW VPAVVGTSEEGATTWNQAGLRAMRIGDEAIISPATFNLDDPDLKPVRHTVTKLRAMGYTT RVRRHEDINPQELHSLIDLTDKWRQNGDERGFSMALSRLGDPLDGRCVMVEAIYPDDGPR AGQTAGILSFTPWGNDGLSLDVMRRDLDGADNGVTELMVAGLMAAGPEIGIRRVSMNFAV FREAIEEGARVGASPVRRLNRWLVLVASKWFQIEQLYRSNVKYKPSWQTRYLNFTDTSDL AQVGLAMGIAEGQLDIPNWLYPVEPPPQPIYSISGHPEIAEFLAEERAPILPQRRLPEQV RTRMATRERLIESGVEAYPPDCKPDHRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDL FDWTGACQLVMERDTMGVDSLRDFRHAVSLGDHFVATGTVGASRNGTLSLEMTSWRLAAK SLRPLPSRRSGFNDPEAKVRQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVET PILQTIHGGANARPFHTHINAYDLDLYLRIAPELYLKRLMVGGAGRVFEIGRNFRNEGAD ATHNPEFTMLEAYQAYGDYVQMRHLTREMILSAARNATGGTVVRGRDRKGVEHEIDLANE WHVITVNEGISRGLGEEVTADTPKETLIGYANKLGIATLPKWSRGDVVLELHEHLSEHVT VEPTFFCDFPTDVSPLTRQHRDDPRLAEKWDLIIFGSEVGTAYTELVDPVIQRERFTAQS LLAAGGDPEAMELDEDFLEALEYAMPPSGGMGMGLDRLVMMLTNASIRETISFPLVRPRT L >gi|302034492|gb|GL383259.1| GENE 34 40205 - 41146 488 313 aa, chain + ## HITS:1 COG:no KEGG:PPA1620 NR:ns ## KEGG: PPA1620 # Name: not_defined # Def: putative poly(3-hydroxyalkanoate) depolymerase (EC:3.1.1.-) # Organism: P.acnes # Pathway: Aminobenzoate degradation [PATH:pac00627]; Microbial metabolism in diverse environments [PATH:pac01120] # 1 313 1 313 313 606 99.0 1e-172 MGGDDEIGCSDMHGHKMLDSSHDAVTSVRELGRRPFRVAYDDGEGPDYHVKDPVVLLMAG AAASSDFWKPVVDRLQHVDVITYDRPGIGGTIWPGRYPELDEEVASLTDLVGLVQGHWDI GQPRKVILVAHSMAAFHAEAFARMHPEVVAGVVFVDPSVEWPTHPPRRRSVALPRAVYKV MDSVAGSLGRHAFAVGVMAQTARSGSVVWHQFQEHRLHRVYGSPDAMAMAVAEWIGYDQQ AWDLMAVRSQHAWPDVPTVLLSAVYSGQEQELKLHERLAPMLNARLVVVENSHHLMMLDR PEAIADAICSLVR >gi|302034492|gb|GL383259.1| GENE 35 41345 - 41554 160 69 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTPILALGHNGNRSLVNTTDYKLHESPSYKALYRRFAVLRPGITQRLQQALHRAFLGSDA WKLFKSPPD >gi|302034492|gb|GL383259.1| GENE 36 41912 - 43375 876 487 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4652 NR:ns ## KEGG: HMPREF0675_4652 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 215 487 1 273 273 523 99.0 1e-147 MSKRVNAMRDFIVSHPWWCVLIVAAMFWIPRAGIWMTVGSWLAIIAVCAKHRSLPAAKVS ARVVSSGSSMELNVGDRVTRYDVFGMCYYEVPKSVVGSTVLCVEREPQNSYDKNALKVSV DGSHIGYVSVWAAADIAPEWDSLGVTSMDVHGCVISALDAYVEIPTNDALRGALTRPRTS KTMPSIRPLAHPRLLSSAPSTKRMQMPVKPWGPCVRNYKLVATKKFKAGITRVCVSCGED GKREKVRLDDLDAQVRLTPNHKLAVFIDDVQVGMVPDEARESYRHVVEELHSSHQCLLVP ASIWMTRQNGFKAGVSVKFPLPDEVKVPVGMPSGPVAILPQGRKVQVTGEENHTEALLGL LAGEHSVPVVAELESFIKKLKTTERTVVGVKVGGVMVGLLSTQMSQHFLPVVEACEEAGI TLVCSGRITGNQLKVDMVLEAVKGSELPPEWINDNVYRYAKRLAGQAGAPESSLHQGESS YDDRVAE >gi|302034492|gb|GL383259.1| GENE 37 43529 - 45784 1127 751 aa, chain - ## HITS:1 COG:Cgl0714 KEGG:ns NR:ns ## COG: Cgl0714 COG0210 # Protein_GI_number: 19551964 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Corynebacterium glutamicum # 12 739 9 763 766 460 39.0 1e-129 MAESTIIMSKQALKLDGSLKPKAFTFLEKLTTDDTAPGLHIEPVKKCRDSRVRTGRVDQQ YRAVLFKLTGEDGNRRYVLEGFYNHDEAYDVAPRVELAINPFNGIPEIKRAEPSIDTPNP TASAPTARKPAAPVQETATPVITADRADMLSLGLDANLVDTALALTSEDAVLNMAASLSG WQEAALVGLASGMTPEQVRQELLESPEELPEPSKKQHGHAASPREPDVELLESLRSPAAA MEFATIEGVDELRRVIEDGNFGAWRVFLHPTQRRFVNGRWNGPFCLGGGAGTGKTVVILH RAVSLARENPGARIIITTFTKNLAHELSASLESLDPALPRASALGQPGVYVIGIDALANA VVREAGADVAEAAEGVLGAPRTDLSRRTSQWLWRDVLDHAGPEVPERLAHHRLLETEYEQ VILPQNITTREEYLRARRPGRGFRLNRRDRDAVWTLVKKYRDDSRISGTISFPEAAAIAA QYLTRHSPLADHVLVDEGQDLTPAHWRLIRSLVPEGPNDIFIAEDSHQRIYGHRLVLSRY GIMTRGRSRRLTLNYRTTAQILRWSTHVLEGGFYVDLDGDDDDKLSGYRSARRGPDVIAH PCTTITEEFDYLAKVVGQWAKDRQSETTAVLVRDRSQRERVVDALHERGVQTRAVGHGSI PPGAPVVMTMHRAKGIEFSKVFLFGVSSRSIPMGIKDYDFDKDEGDQALLRERSLLYVAA SRARDELVVSWTDQPSPLLSASVSSVAASTS >gi|302034492|gb|GL383259.1| GENE 38 45777 - 47681 715 634 aa, chain - ## HITS:1 COG:Cgl0715 KEGG:ns NR:ns ## COG: Cgl0715 COG1205 # Protein_GI_number: 19551965 # Func_class: R General function prediction only # Function: Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster # Organism: Corynebacterium glutamicum # 1 612 1489 2084 2100 214 28.0 4e-55 MDLRWINLGKETPSAPSQHVAGVRYHAPLFRICEGCGHLDRTTGTNDPSEHRPWCRYRNK LDEHVRTVALTRSLTTQAVVLPLPRWMVAGDVFALPSLRAALLLGLREQFGGTPNHLGVM PIKEPVGGGTRDALLLHDLVPGGTGYLAEFNDPQKVWDALRHAFQIVRDCPCKDEERLAC HRCLLPLAPAHEVQHVSRAKAEDCLKVLMGLVDDDEPEAQMTWKVTTKAPSTNPSDESYL ESRFRESFITLAHNLHARISQSYGPGGNVINVSIGKAKYTLQPQLPMHGCKPDFVLRGGD RPDLAIFTDGETFHATPAHNRVRDDAKKRAALRSAGIEVLAVTLTDVKAFDSRQIPVPPR WFNSSASSMLIGTYNYTSDAVRAVTGGPFALLEYWMSGKSLDALEGFASAIPFFFSTGEP DDHVDPSIPADNLQQRGLPKDRTAPVWWSQNGPLSIRTRLRASSPRPATDVCVVLDDDAV SSPDFSHAWHQWLALSNALILRRPPDQTVIRGTQPLEESPAEPTHSVGTIDITQTPWPTV IENLGSSLATPELPGLLEDLAAQGVSEPTAGEEIGSEGIMVDLAWPESRIAVIFAPEPDH EDLLAEDGWTLVPPTAHDITMALANTTEGEGHHG >gi|302034492|gb|GL383259.1| GENE 39 47662 - 52131 2407 1489 aa, chain - ## HITS:1 COG:Cgl0715 KEGG:ns NR:ns ## COG: Cgl0715 COG1205 # Protein_GI_number: 19551965 # Func_class: R General function prediction only # Function: Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster # Organism: Corynebacterium glutamicum # 1 1456 1 1468 2100 900 39.0 0 MSELVPPKQAAKLQNALLDYLTTTFALSDADAQRALDEFLRDPDEGIFKGPYLRTRMPFA PAPRYSADELEWMPENFTPYGHQARAFTRLNSALGRPRPTLVTTGTGSGKTEAFLLPVLD HVIRARRNGVTGVKGLILYPMNALANDQAQRLAHLISTDKQLAEVTAAIYTGENGATRTI VSKDGLITDRTVIRDDAPDILLTNYKMLDQLLLRHEDQHIWQQSAESLQYLVLDEFHTYD GAQGTDVAMLLRRLGLALKSYWPERGSKADTHTTEEWDRPLGKITPVGTSATLGTTPDIS KTANQSSSGERSGDMAAFATTVFGEPFDTSCVVTEFRKTIDEWAGDAQKRLWDREIEPRT INALIVNDLVNAVTHRPSDEVCATLLTSLYEGAEGLTDRDDLVLLAKGHPFIRQFLEATT EAIHVRDLADRLLPGTSHENDPRVTFLLELLGALGHLRALPDRDMPSTETHLWIRELSRI DRDVSTATHFRWSDDGTVLGQTTDDGTEPEVVALPAVYCRRCGRSGWGVQLASTGNNLSE NNDSIRRTHAAHDGRFRALLSAPREGASAVDTGEATASLRWFDTVNRCLDHHIPDADSPK YRNGVLLPVLTQVGNDADEDAKDDVCPSCGAKDAIRFQGAAIATLLSVCLSTLFGSDDFD EKKALVFTDSVQDAAHRAGFISSRSHALTLRTILRGAIGEEYATIPQLIQGVLDQAGDDQ FKRYRLLPTELAEQKNFRDFWRSARYRKVPKKTLSQVRNRVAFDAILELGLQSRYGRTLE QTGSICVEVNAGTPAQMAAIGRSALGHSEDDLVATLASLTDDQVVSWVRGILERIRIQGG INHPWLHTYLEDDGARWHLWGGRKEPGMPAFPYTRSAPAFPRVGGQHVQHQQLDNVTDGQ SWYARWTGRVLGVSAGHGARLVRSLLECLHRGSVLEGTATKAQATVYAIPNERIMVRATR DEELRDSTILLRCDLCQAVHPGSPATVRQLTDAPCLNGNCSGHLTPAPMAPDNFYRTFYS AGDPRRIVAREHTSMLTDKRRLKYENGFKDGSEDPSAPNVLVATPTLEMGIDIGDLSTVF LSSLPHSVANYVQRVGRAGRATGSALDVTMVRGRGEHLPRLGDPASMINGQVRPPATYLS AVEILRRQYLAHLGDELARDPDAAHPLTSSAAMNGGNGGFLACLVDYAEAHADEHLDRFL STFASLRTDSIENIRTWACPANGPRTSGLAQQVFAAAGRWSRTLEELRHRRETIKASLPE LLQKANIPNAGNDDIQAAKEAETTIEWIGKLLGKANQAYWIATLEEYGLFPNYTLVDDSV KLHVNLSWYDPDKEKYRSKASSFSRGSAAALRDFAPGATFYAMGHAITIDAIDFGRDGDS IRTWAVCPTCGYIVDLELAGNAPAQCPRCHRQGISDIGQHLKVVELTRASAAIKRDESRI DDTHEERTQASFAVAPAADIDPLTYPQRVVRAAHRVWRSISRPNGPALD >gi|302034492|gb|GL383259.1| GENE 40 52128 - 55556 2602 1142 aa, chain - ## HITS:1 COG:Cgl0716 KEGG:ns NR:ns ## COG: Cgl0716 COG1002 # Protein_GI_number: 19551966 # Func_class: V Defense mechanisms # Function: Type II restriction enzyme, methylase subunits # Organism: Corynebacterium glutamicum # 1 1136 395 1530 1532 1034 47.0 0 MGLGNQALQQVLERLLLSKEQHGRKGRERGYISYAELGINQLGAVYEGLMSYSGFFATED LYEVAHDGNPQKGSWVVPLSRAHDIAQEDFVTVVDDHGARHPRIHRRGEFVFRLSGRARQ QSASYYTPEVLTRFTVGQALEELLDDTTTAEEILHLSVCEPALGSGAFAIEATRQLAEQY LTRRQAELGRRIDPEDYPAQLQRTKAYIALHNVYGVDLNATAVEFAEITLWLDTMASGLD APWFGLHLRRGNSLIGARHAVYTRDQLTSKAWLTTPPTDVPLTDLAARLDDDAVDPTQAD GSIPHFLVPAAGWGSSADSKEAKTLVPQRVKDVKDWRKQFRRRPSRHDVTTLVELGHQVE DLWTMALRRLTVAEQQTSRDIALWGRNEAPSHRQVVTREQVEQSLADPDGAYQRLRLVMD AWCALWFWPLTTQVAPPSWAEWIDACTMLLGGRLSRADRRRDAPMLGSAQIWEALAAQED LALASAGAATVAQTLDKHPWLQVCRQVAREQGFFHWQLDFAPVFARGGFDLQVGNPPWVR SILDMDALLAEGDPWWQLAGKTPEDVREQRRTVTLALPGLADSVCRGITDVSGTGSFVGH ATNYPMLQGLQPDLYRCFMCQTWAHTSSRGTIGLVHPETHFTDEKAGHLREETYPRLRRH WQFVNELKLFDEVHDLVTYGVHVYGSPAQPHFLQASALYHPDTVVGSLRHDGSGGAPGFK VDGHWDQRPHAQRIETVTDETLATWRDILDPNLEAPRRTRMLYTVNRDVAETLQQLSKAP RLGSLSLRFSPGWHEKNDRTKGYFIQQWGTPDSWNDVILQGPHLHVATPFYKSPNPTMKH NQDWSVVDLETLPPDAIPVTSYKPAGDRAWYDADYTHWDGDPARDHYRLAWRAMAANTGE RTLIPAIIPPGTAHPNGVFCVGGADNRILTACAGFASSLLLDFSVRAAPKSGIYQAVFDR LPAPCQRHPLLPALLLRTLRLNCLTDAYADLWAECFDPSFTSDSWTIPDRATTPLGDVGP TWTSQTPLRRAVDRRQALVEIDALVALMLGITADQLCTVYRTQFAVLYGYDHDQYFYDAH GRLVPNQVLKVRRKKGEAITEAERTATTYRYDLPFHTYDRELDMHIAYVEFERRLETRGT DS >gi|302034492|gb|GL383259.1| GENE 41 55616 - 56752 771 378 aa, chain - ## HITS:1 COG:Cgl0716 KEGG:ns NR:ns ## COG: Cgl0716 COG1002 # Protein_GI_number: 19551966 # Func_class: V Defense mechanisms # Function: Type II restriction enzyme, methylase subunits # Organism: Corynebacterium glutamicum # 1 368 1 355 1532 233 39.0 5e-61 MPSSDALIVVEDWISEHFFTTDARKESFQKLVLDRRKQWDGEDVPTTRTRFTERASKLAT MLAALYSEDLDEAARAEAAEQAHEELLRVLGYSTGEFRIRRDGPVRWFSTAGIEQSALAV VTARPVETPDQLMVKDARTLPTPWRPSEDAPDSEEVHSTSRLVSTLFAPKEGPSFALIMA GRWLVVAEKGRWPEGRYLAVDVQTVAERADLKKGGEVDRALTCLEAASLAPDADGHVWWS EALDESIKHTVGVSQDLREGVRESIEIIANEVVSRRRDRGLEPLSQDQAQPLAMQSLRFL YRILFLLYAEASPELGVLPVGAPQYDSGYSLDRLRELVQVPLVTQRSMAGTHLYESLGTL FRLVDRGNLEDVATRRPA >gi|302034492|gb|GL383259.1| GENE 42 56739 - 58706 1123 655 aa, chain - ## HITS:1 COG:Cgl0717 KEGG:ns NR:ns ## COG: Cgl0717 COG0553 # Protein_GI_number: 19551967 # Func_class: K Transcription; L Replication, recombination and repair # Function: Superfamily II DNA/RNA helicases, SNF2 family # Organism: Corynebacterium glutamicum # 3 641 315 954 962 469 42.0 1e-132 MKRRHRNDPEVSSVAGADWAKRKPPQNLLVKATAAEDAVADELEQVWLHPTGSSPYSGAA SALFPWTIAKAFLSSPAALRQTISERRRRITAHPTTPDQQVEIEALDRLNELNDAVFDSS AKYDELVRYLRSIGIDRRSSERVVVFAERVATLCWLRDRLRGDLCLAEDQIAVLHGGLSD TEQQQIVESFKQSNSPIRVLVTGDVASEGVNLHQQCHELIHFDIPWSLIRIEQRNGRIDR YGQRHSPQITTLLLEPSNPVFRGDLRVLSRLLKREQEAHEALGDAGSLMGRYSASAEEED IKLVLAGRRDFNDVVRSVDELSPEDSLACLLASLNAPTDDKPPSAKFTEPSPLYPRPVDF LREALEAYYTTPSAAPTDTGRGGGVSWRDHGDGVVEFIPPADLRQRLEVLPQSYLQDRHV LERFSLATDETVAQAQLVRALTDDSDSSWPEAHYLSPLHPVLDWAADRALSKLSRNAVYV VRGKVDLPAVLAVGTLTDRRGLVVAASWMCIRFLDPENLTSPWITMHTSSADMLADVGVG ADMSNPGPVARPDDLKPLVELAMNAADEELKSTFDAAKEGTQDRIAAWNHKTVAWQEDSQ TLIPNHALRIRRTSVEEEKQLIADMEPQQKLARPLLVVVPENYPTAHEECAHAKQ >gi|302034492|gb|GL383259.1| GENE 43 58703 - 59614 738 303 aa, chain - ## HITS:1 COG:Cgl0717 KEGG:ns NR:ns ## COG: Cgl0717 COG0553 # Protein_GI_number: 19551967 # Func_class: K Transcription; L Replication, recombination and repair # Function: Superfamily II DNA/RNA helicases, SNF2 family # Organism: Corynebacterium glutamicum # 4 296 12 305 962 340 57.0 3e-93 MPITVAPGSVVQVRDEEWLVSTVEQTDDGQLLTVQGLSDLVRGTTAKFYEHLDNIIPLDP HDATPVADASPHYRDARLWLEATLRKTPIPLGEPTLAASKYALAKRLQYQYSAVQQALDP ENLRPRILLADAVGLGKTIEIGMILSELIRRGRGERILIVCPRHVLEQMQNEMWSRFAIP FVRLDSVGLQRVKQKIPANRNPFSWYKRVIISMDTLKQDRFTHDLHRHEWNAVVIDESHN VTGDTTQNNRLTRTLAPNTDALILASATPHNGNRKSFAELIRLLEPTGVNPHGELDKGDL SVW >gi|302034492|gb|GL383259.1| GENE 44 59678 - 59959 220 93 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4645 NR:ns ## KEGG: HMPREF0675_4645 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 93 19 111 111 155 100.0 7e-37 MLVVHGMMQVNGHPDASPVISGIAGLGHIGLSVGLVGLMVALFTSLPTGKLGTAHDQSLT LKQAATTRHIAYISGHHHDGSHGYNGWRITPAT >gi|302034492|gb|GL383259.1| GENE 45 59775 - 60224 72 149 aa, chain - ## HITS:1 COG:no KEGG:PPA2360 NR:ns ## KEGG: PPA2360 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 138 1 138 182 266 99.0 2e-70 MRSLKKLAICATTWLVIGLLGGVFSREFTKAHDVTAWTQLKVVHTHSLALGFMLTLIVLL VERAFALSHHRGAFAFLGIQPWPPADDRNARRARHDAGQRTSRRLPCDLRYCGSRPHRPV RRSRRPHGGPVHITSNGQIRNSSRPIFDP >gi|302034492|gb|GL383259.1| GENE 46 60713 - 62305 1876 530 aa, chain + ## HITS:1 COG:Cgl2361 KEGG:ns NR:ns ## COG: Cgl2361 COG0544 # Protein_GI_number: 19553611 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) # Organism: Corynebacterium glutamicum # 1 435 1 432 449 294 41.0 3e-79 MPSSLEKLSTNRVKLTIEMPFDELKPSLDKAYKDIANQVNVPGFRKGKVPAPVIDQRFGR GVVLQEAINDALPAAYGKAIEENTVVPLGQPEIEVTKLEDGEVVEFTAEVDVRPDFDLPD VSAISVEVPAVEVPDEDVDERVETLRQRFATNTEVERAAAKDDLVTIDLAGTRDGEALED ATASGVTYKVGSEGMLEGLDEAVTGLKAGESAEFHSTLVGGPLRGQDADIKVTVTKVCEQ ELPAVDDDFAQLVSQFDTVDEMRADLRTALENMARLDQAADARDKVLEEVISKIDIELPT SLIDSELEARRQQVNQQLAQAGMTVEEYLEDSEEEVDNADDFWAEIEKRSLDALKAQIVL DKMADDDEIGVEQNELTELLFRKAQQNGTSPEEEAQHMMQHNHLPDWMQEIRRGKALASM VGAATVTDSKGNALELDRIQPDGTIADKQAEEDAPAEDSAEKADGKATEEPKAEEKAPAK KATTKKISAKKSAGAKATTKKVVDAKSDDKPAAKKPAPKKKTAAKDDKSK >gi|302034492|gb|GL383259.1| GENE 47 62410 - 63711 1016 433 aa, chain + ## HITS:1 COG:STM1481 KEGG:ns NR:ns ## COG: STM1481 COG0628 # Protein_GI_number: 16764826 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Salmonella typhimurium LT2 # 88 420 12 339 344 138 26.0 2e-32 MNKRPARPTRSRRRISVAPATRQLRNARQMMADDIAVARAVERGELETEEHPTHGATNAE KAAESGLQPQPSDHEKAEVATSKHGLPKLTIVLLTVAAAWLGLSFLHELSSVVAPLFFGL NLLITAYPIHTWLVKHKCPRWISATTAGTAVIVVLAAGVVGMVWSVAAMINQLQSYIPQM EKIYTQLLHWSTQLGYSQDVIADKLKKIDPQQVMSVVTSVASDTTSVVTMIIVILTGMIF MVMDTPQMHDRLRMAGSRKPDVVLALESFASGIRKYWLVTTVFGLIVALFDWAALLIIGV PLAGVWALFSFLTNYIPNIGFIIGVIPPALLALFKDGWVAAVAVVVSYSVLNFVIQSIIQ PKFAGDAVGLTPTMSFVSLLLWGWVFGALGTLIALPCSLLVKATLIDHDPGARWVNALIS SRPTEGLEDNPDE >gi|302034492|gb|GL383259.1| GENE 48 63787 - 64425 673 212 aa, chain + ## HITS:1 COG:Cgl2360 KEGG:ns NR:ns ## COG: Cgl2360 COG0740 # Protein_GI_number: 19553610 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Protease subunit of ATP-dependent Clp proteases # Organism: Corynebacterium glutamicum # 21 202 10 191 197 240 65.0 1e-63 MSHNTSIASQGMPAMAGPETGGAGMTDNVYQSLLRNRIVFLGSEVKDENANALCAQMLLL NAEDPEADIYLYINSPGGSVTGGMAIYDTMQWISNDVATVTMGMAASMGQFLLTAGTPGK RYALPHAKILMHQPLGGVGGTATEIAINAKMLKDTKRELSQLNADHSGHTLEQILEDSDR DHWFTAQEALEYGLIDHVYSNASQLRGDAPNQ >gi|302034492|gb|GL383259.1| GENE 49 64361 - 65122 709 253 aa, chain + ## HITS:1 COG:Cgl2359 KEGG:ns NR:ns ## COG: Cgl2359 COG0740 # Protein_GI_number: 19553609 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Protease subunit of ATP-dependent Clp proteases # Organism: Corynebacterium glutamicum # 56 250 8 201 208 213 62.0 3e-55 MGSLTTSTAMRRSFAATPPISEVTMGFNAFDKNRLAALNAEQAEQAAPGGLAPAGPRNDY YIPQWEERTSYGVRRVDPYTKLFEDRIIFLGTPVTDDIANAVMAQLLCLQSMDADRQISM YINSPGGSFTAMTAIYDTMNYVRPDIQTICLGMAASAAAVLLAAGAKGQRLSLPNSTVLI HQPAMGQATYGQATDIEILDDEIQRIRKLMENMLATATGQSVEQISKDIDRDKYLTAQGA KEYGLIDDILTSL >gi|302034492|gb|GL383259.1| GENE 50 65311 - 66600 242 429 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 [Bacillus selenitireducens MLS10] # 160 407 248 448 466 97 29 4e-19 MARIGESGDLFKCSFCGKSQKQVKKLIAGPGVYICDECIELCNEIIEEEFSSSDEAGGVE DLPRPRELCEFLDAWVIGQEEAKRTLSVAVYNHYKRIQSEANVPRARRAEDDGVELGKSN ILMLGPTGCGKTYLAQTMARQLNVPFAMADATALTEAGYVGEDVENILLKLLQAADFDVK RAERGIVYIDEIDKVARKAENPSITRDVSGEGVQQALLKILEGTVASVPPQGGRKHPQQD FIQIDTTNVLFIVGGAFAGLEDIIAKRIGTRPLGFNNDPGASEVIEGPEALSLVRPEDLH QFGLIPEFIGRLPMVTAVHPLDRKALVRILTEPRNALTRQFEKLFELDGVELTFTEGALE AIADKAVARGTGARGLRAIIEETLMDVMFDVPSRDDVSRVVVTQEAITGEGKCQYLSTPV FHGRGRLSA >gi|302034492|gb|GL383259.1| GENE 51 66736 - 69996 2005 1086 aa, chain + ## HITS:1 COG:SSO2098_2 KEGG:ns NR:ns ## COG: SSO2098_2 COG0793 # Protein_GI_number: 15898881 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protease # Organism: Sulfolobus solfataricus # 678 1067 1 387 387 264 39.0 1e-69 MATGYLRYPDVHGDLVVFTADDDVWLVPVTGGRASRLTNDHVMVRNPRFSPNGTKIAWTS YLGQRPEVFVIDLATGDQRRLTWLGAARSFVVGWQDDEHVVFSSPHQTNDVGLAWLYTVS LDGHVERLGYGPGMDLAVSSDGAVAVVTPNSGDCSRWKRYRGGTAAQIWLRPARAEKFLR LLREGNDNHDGYAAAGRYSVGWNDGRLIFSSDMSDDDCPQAQAQIWSVDGQGHDLRQHTH HGEAEGYVRDPRTDGTTIVYHTHGALWRMTGLDAEPERLEIDLGIGAPPRMPLDPTDRLE AIVSDHGGDGSLLEWRGAAYFLTHRSGPARALSAADGVRIREPRVLGQTGQGVWASDVDG EDCLEVANLDGTGEIRRIAQGQIGRVLHIAPAPDGTKVALISHDGRILIVTIADGAIREI GKSLEGEANGLAWSPDSRYVVWRSPMATGEAMIGQIRCWDEQGMGEPFELTRGAFDDSCP VFTADGKYLAMLSARTFDPNYDGQTFDLSFGHTQRPWLVPLSATEASPFGPSSQGWRISE VQDAKAKANAETSNGEADETVICHVAADGFEERMVPFPVPSGSYRDLAVVKDGVVWIEVA DRGGELGATRAGVTGEAPSDVLWHYNLSARHLDKLCERVDTFSVSGDGERLVVRHRDDTI VVPSSHKVDDDDPAYIRVDLTRLRRTVNPRAEWRQMFDENGRLMASHYWREDMNGVDWDS VLNRYRPLVDLCHVVDDLHDILWETVAELNTSHSYVSASGAAGDSDMRAGLLGADVSSGN DGAKVVRVIPGESSDPRAWSPLRAAGVAVTEGDVIVAVDGRKVGADGNLGELLEGSAGRV VELTVRRGENERQVAVVPMADEAPLRYHDWVASRRRYVEEHSGGRLGYLHVPDMVSDGWA ELHRQIGEATRHEGVIADVRFNHGGHTSQLVVERLARRVVGWDYSRWYATADTYPQNAVR GPIVMVTNQWAGSDGDIVAAATQAMGYAKVIGERSWGGVVGIDGRFDLVDGTSVTQPRYA GWYGSYGWGVENHGVDPDIVVTVSPEDWEADCDVQLDAAIAECLRQLDDKPAATAPELPG PAFDRC >gi|302034492|gb|GL383259.1| GENE 52 70114 - 74079 2259 1321 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4636 NR:ns ## KEGG: HMPREF0675_4636 # Name: not_defined # Def: F5/8 type C domain protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 1321 1 1321 1321 2479 99.0 0 MSRTPRGRSIGALAVSAGTMLALIAPMTPAHAETRYRQINQAAITAVAADSATATDPISN TLDGNPDTIWHTKWQNGKDPLPHWIVFKLGDEAVDLGKVEITPRSSSNGSGRMHDYELYT ADTKTCNNAAFSSAKPVAAGSYGVSNTSIRKITFAATKATCVKVKVNSSWGGDGSDEEVS SMAEFNAFTVDGSDPSPDPTPSEPPTPEVPKDAISLSDGTVTVRARRDFPQVIDYTVGHA HMAGRIGSPLTKVRINGTDHVATVSAPTTTGSSASWKLTFRDLPGVELTANIKVSDGVMT WSISHIVDTPDRRVNIVSVPGLTLASVTSTDPKAQLSSANIVVDRNKTGDLFQPLATADV SQDTSWVAMANDSTLAAGFEDNATQDGLVGSAATVARFVHSISQVGGTKVGAIEPATWVH RGKGSATPCPTDSLGNKAVCQLPGGATVKDGIGPDPDTPYVRVKIVADANADGKVDWQDA AVATRDVTMKPTGSGDVANKVITHIPFNIVSQATHPFLRTLDDVKRISLATDGLGQQALL KGYQAEGHDSAHPDYGGNISHRAGGMKDLEKLTESGRQWNTDFGIHVNLVESYPEANHFG DNILVKPYQKAWDWMEQSYRMDYAKDLGSGQLFARLNQLRKELGAKSNLDWLYFDTNYPA GWQNDRIANALNAEGWRIGSEWSSTYPRYNQWSHWANDENYGTGNKGYSSRIIRFIDNSR RDTWNPDPILGNSNVVEYEGWTSHNDYNAFIANVWQRNLPTKFLQRSDIMSWQDGRIAFA NGAVATSSKKSISGHEIPTARTITFDGATVFKEGGSYLLPWSNGGSDRLYYWNPGNGSAT WKLTNSWAAQKSVSLFMLTDTGRVKVAEIPVTNGSIRIPATKAKTAYVLYPTSKVPAAKT PNWGEGSHFANPGFYSGDTAGWNARGNVSVKHNDRGNFHLEFGKAQSQISQVLNLPAGDH SLWAWVQIDPTKTRPVGLAVDGTGVTPIDHQKGCGGHAESVITSTTAINATASDEYFGTY HQRLRVAFHSDGRPVTVTLKALAGNVIVSADDFRVVDAAVPSDPHVTPATVLFQNFEDVD TGYWPFVTGSAGMEGDARTQLSRRHEPYTQKGWNGRAMDSVLSGDWSLKMHEERNGIVLR TTTASAPLTGGGTRYRISFDYPADKPGYSFVTGHDKVSGKSVKEVITESHAMGVATSTTH FSTDIVVKDQPAWIGFTHQGEGDMSIDNLRIEKLDPRPVSVTSTQAAVFPDACKPTPEPI QPAQPSASAPATSGSPQAPGTGNRPNRYALPRTGADGAGLGFSSSEAASATAAVGVSRQG R >gi|302034492|gb|GL383259.1| GENE 53 74306 - 76918 2319 870 aa, chain - ## HITS:1 COG:RP687 KEGG:ns NR:ns ## COG: RP687 COG0525 # Protein_GI_number: 15604530 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Valyl-tRNA synthetase # Organism: Rickettsia prowazekii # 29 861 14 812 814 585 37.0 1e-166 MTSQTFTTSSATPPTRGVVPDKPALEGLEVKWGKIWEDEQLYAFDATAVDSREQVFSIDT PPPTVSGHLHPGHVFSYTHTDTVARYQRMRGKKVFYPMGWDDNGLPTERRVQNYYGVRCD PSLPYDPDFTPPSKPDPKRQVPISRRNFVELCVELTAVDEKTFQDLWRAVGLSVDWNQLY TTISPESQRIAQLAFLRNHARGEAYLSDAPTLWDVTFSTAVAQAELEARDYPGAYHRLGF HRPNGEDVFIETTRPELLAACCALIAHPDDERYQHLFGTTVTTPLYGVEVPVLAHSAAEM DKGAGIAMCCTFGDLTDVAWWRELQLPTRTIIGRDGRILSETPQWIIDAGSAEKYETIAG KTTFTARKLVVEALVESGEMDGEPKPTQRKANFYEKGDKPLEIIGTRQWYIRNGGRDDDL RNALLERGRELEWVPEHMRHRYENWVEGLNGDWLISRQRFFGVPFPVWYPLGTDGEPDYE HPLLPDESALPVDPASQPPSGYQESQRGVAGGFIGDPDVMDTWATSSLTPQIVTGWERDA DLFAKTFPMDFAPEAHDIIRTWVFSRVVRAHLENGVLPWKRAAISGFVTDPDRKKMSKSK GNTVVPTEIIDQFGADAVRWRAAMARPGMDSPFDKAQMKVGRRLAMKILNASKFVLGFGE GGQVCDITNPADLSMLAGLRQLIAEATEAFDKFNYTAALEVCEQFFWTFCDDYLELIKER AYDSEGADNAGALSARTALRLALDVMLRLFAPFLPFVTEEVWSWWKDGSVHTSSWPTTDE IPVTGDVDLMSDVSAALVELRGVKSTHKVPMRTPILSARISAPASVIANLKAVESDLAKV SKTESLTFLAEGDELILEAELGEPPAKRKK >gi|302034492|gb|GL383259.1| GENE 54 77059 - 77856 775 265 aa, chain - ## HITS:1 COG:DR0753 KEGG:ns NR:ns ## COG: DR0753 COG1651 # Protein_GI_number: 15805779 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Protein-disulfide isomerase # Organism: Deinococcus radiodurans # 81 259 85 261 262 65 32.0 1e-10 MADKKATATTSKRAALRAQREAQESAKKRRRIIGVTAGVVIIAMVVVAVVFGLNHKSDDV PTTGQITPPSATKDGVYTLNPDKVKAGAPTVTVFQDYQCPACKGAEDALGKPLNELSAEG KIKLEYHTLTFLDSNLHNDSSTRAAMAAAAADVVGKFEAYHDVVYRHQSKDEGAGYTDEQ LRKEFAAEAGITGSNLTKFQRIYDNKQTEQFVKNGNDKGLQELQKSGNTGTPAFLINGKS WDGWADFMQSVPSADELLQAIKKAH >gi|302034492|gb|GL383259.1| GENE 55 77941 - 78435 461 164 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4633 NR:ns ## KEGG: HMPREF0675_4633 # Name: not_defined # Def: putative type IV conjugative transfer system protein TraL # Organism: P.acnes_SK137 # Pathway: not_defined # 1 164 4 167 167 280 98.0 1e-74 MDSQPSLRSSTVRDWAGLAARIILGATLLVAGIIKATDIDSTIWSVRTYQIVPWDLAPVI GWTMPILEIIVGLMLIFGIATRWSGLLGTLAMVVFIVGISSVWARHISLGCGCFGNGGPV DRNWDLTQRTYVLDILRDLGLTLCGVWLVIRPRSALSVDHWITS >gi|302034492|gb|GL383259.1| GENE 56 78601 - 79335 203 244 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163781723|ref|ZP_02176723.1| 50S ribosomal protein L13 [Hydrogenivirga sp. 128-5-R1-1] # 5 221 3 204 228 82 29 1e-14 MTSRRLMRYQSTQGLAEGVAHRLVQTIVRIQAAQERIDLCLTGGRIANIVYAAMEDVPEC AKIRPDQLHVWWGDDRFVPTGHPDRNSLQALSLLSSAIRLDPSKTHVMPAADGKADPDEA AYSYAQELGGVVFDICLLGMGTDGHVASLFPGHPSFNPTTAALAVGVTDAPKPPPDRLSV TMPVINRSKRVWFLVSGPEKAEAVEKVFAGDESLPATWANGTIETSWMVDHDASIGLPRY NCSL >gi|302034492|gb|GL383259.1| GENE 57 79332 - 80264 598 310 aa, chain - ## HITS:1 COG:Cgl1539 KEGG:ns NR:ns ## COG: Cgl1539 COG3429 # Protein_GI_number: 19552789 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-P dehydrogenase subunit # Organism: Corynebacterium glutamicum # 1 284 1 301 319 161 37.0 1e-39 MIVTLNDTTASKIGGAIVEARRTVGSGSGLVHTLICICDSSHFDAAFEAARDAARQHPSR LLMVVTTRSRKDKLDAEVHAGEGTPGDVIVLRFSGAMAKRPASVILPLLLSDSPVIAWWP FSGPDDLASDPIGALADRRITDSAADKDPCKALIRRAAHLTEGDSDLCWARTTSWRALAA AALDQHPATVESARVESAAGNAPAMLLAAWLGLRLGVPVERVTTDAPGISAIVMSTSGGD IEIRRRSGRYAVYRIPGEPARGVALDRREVQMLIGEELRRLGPDKVFTAVMAEIHDGAGR ISLTNDRDES >gi|302034492|gb|GL383259.1| GENE 58 80274 - 81719 931 481 aa, chain - ## HITS:1 COG:MT1494 KEGG:ns NR:ns ## COG: MT1494 COG0364 # Protein_GI_number: 15840906 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-phosphate 1-dehydrogenase # Organism: Mycobacterium tuberculosis CDC1551 # 1 481 33 514 514 664 67.0 0 MFGVTGDLSRKKLMPAVYDLANRGLLPPGFGLVGFARRDWEDEDFAKVVHDAVAERARTP FREEVWEQLLEGIRFVRGEFDDNDAFERLANTIRELDEKRGTGGNHAFYLSIPPRSFETV ISQLKRHGMTGHDSSHWSRVVIEKPFGHDLESARDLDEIISSAFSPESVFRIDHYLGKET VQNIMAFRFANQIFEPIWNNHYVSHVQITMAEDIGIAGRAGYYDGIGAARDVIQNHLLQL MALTAMEEPTSFDAKQLCAEKTKVLAAIQPPDDMFAQTCRGQYVAGRQGGERVRGYLEED GVGPRSRTETYAAVRLTIDNRRWAGVPFYLRTAKRMPRRVTEVALNLQRAPHLPFSDTAA LGTNAVVLRIQPDEGVTLRFGAKVPGTQMELRDVTMDFAYGSSFTEASPEAYERLILDVL LGDPPLFPQHEEVELAWKILDPVLDFWAESNTPPCKYPAGSWGPSEADEMIARDGFVWRR P >gi|302034492|gb|GL383259.1| GENE 59 81977 - 83086 948 369 aa, chain + ## HITS:1 COG:MT1498 KEGG:ns NR:ns ## COG: MT1498 COG0109 # Protein_GI_number: 15840911 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Polyprenyltransferase (cytochrome oxidase assembly factor) # Organism: Mycobacterium tuberculosis CDC1551 # 82 369 22 304 308 265 52.0 8e-71 MRTSAVRKPKIVKTAIRGTSHFTDVPCPAAAAMPFSISKDTVSNQTTHVATAPASQRPDP VETKLEQEQGRPRLSSRDVVHAYVALTKPRIIELLLITTLPVMFLASHGLPKLGLAIATM VGGLFAAASANVFNCVIDVDIDQKMRRTRRRPLPRHQVPRRSALIYGIILEIIATIILGF GTNWLSAGLALIANLFYVFVYSMLLKRRTWQNTIWGGIAGCFPPLIGWTAVTGSVRWEPL VLFFIVFWWTPPHTWALSFRYREDYEAAGVPMLPVVRDAPEVTIQILIYTVMTVATSLVL WPVAHMGWIYVVVAVASGAVFIVEAAQLLRRANAGLRDALLKPMGLFHWSNTYLSLLFLA IAVDPLIHL >gi|302034492|gb|GL383259.1| GENE 60 83200 - 84708 771 502 aa, chain + ## HITS:1 COG:Cgl1519 KEGG:ns NR:ns ## COG: Cgl1519 COG4409 # Protein_GI_number: 19552769 # Func_class: G Carbohydrate transport and metabolism # Function: Neuraminidase (sialidase) # Organism: Corynebacterium glutamicum # 120 437 80 399 399 285 49.0 2e-76 MTLTTKLSALTIAGIMVVIGVPMVTQSAMASGRAPAPVAATTQPKLVTGDITSTDQSGTN LFFGKKIVRNARGAIMKVDRTWPAAVPAPLPDVRADSSTRMLLGPVVDLAVNEHPAGVFY RIPALATASNGDLLASYDLRPGSAGDAPNPNSIVQRRSRDNGRTWGPQTVIHAGTPGRRK VGYSDPSYLVDPATGRILNFHVKSYDRGFATSEVGTDPDDRHVLHAEVSTSTDNGHTWTH RDITREITPDPTTRTRFVASGQGIALLHGPHAGRLIAQMTVRNSVGQQAQSIYSDDHGIT WHAGNPVGRMMDENKVVELSDGTLMLNSWDAARSGRRKVAYSQDGGLTWGPVKLVDDLID PTNNAQIIRAYPNARAGSAKARILLFTNVRNATERVNGTLSVSCDDGRTWVSHQTYMPGE VGYTTAAVQSDGALGVLWERDGIRYSTIPMGWLNSVCPLAPSGRPTSGKPTSGTSLPPTA TPSGSLHGGASSRPTSLPHTGD >gi|302034492|gb|GL383259.1| GENE 61 84810 - 85766 667 318 aa, chain - ## HITS:1 COG:Rv1456c KEGG:ns NR:ns ## COG: Rv1456c COG1612 # Protein_GI_number: 15608594 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Uncharacterized protein required for cytochrome oxidase assembly # Organism: Mycobacterium tuberculosis H37Rv # 38 313 17 308 310 121 36.0 2e-27 MATSKPGRLGDSARTVGPKGVHVDLMTARDRRLYGWCIAALVTNMGIVVTGAVVRLTGSG LGCNTWPHCTAGSFTPHEAMGIHSFVEFGNRLLTFVLVAVAIGALVRCYRIKITAQLMAL CWINLVSIALQAVIGGVSVRVGLNPFVVALHLLMSVAIILVNVKMIWLVGPHSSEAVDGL TMGLVRATVAMMCVVMWLGTVVTGSGPNAGDSGSARTGFNIETVARLHGISVWITVALTI ACLVIATTRHLAMMRRWSIILVSVEIYQAIVGYSQYFAHLNPWLVIWHMVGVSLAAAAVG ALWCSVRPMPSPVLNRQS >gi|302034492|gb|GL383259.1| GENE 62 85688 - 86452 613 254 aa, chain - ## HITS:1 COG:Cgl1531 KEGG:ns NR:ns ## COG: Cgl1531 COG0842 # Protein_GI_number: 19552781 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Corynebacterium glutamicum # 8 252 23 264 268 99 34.0 5e-21 MTTLDLHPAPQAAPAAARVRNHALTEVRLVMRNGEQLLLALVIPIGIIVAGRFLGGRVGL TMDVLAPSVLALAIWSTCFTSQAIMTGFERRYGVLERLSATPLGRSGLLAGKAMAYSVIS LAQVILLVIVSLALGWHPHGSGLAWLPTLVSVALAMMTFGLAALAMAGSLKAEVTLGLAN LVYIVGLVAGAVVWPLVDYPKAIRPVIAALPTTALGESLRAWGVGYTLWWPLASLAGWAI LLGLLARKVFTWIS >gi|302034492|gb|GL383259.1| GENE 63 86454 - 87203 301 249 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 14 216 2 212 311 120 34 5e-26 MPETPLTLDPHAPTEVLLLEDVRVTFGHVIALDGLSLTATTGAITAVLGPNGAGKTTMMR CCTSLISPDSGRIDVLGHAPGSPEAAAATGLMPQSAGAWSGIRAGELLHYMAGLHANPID PDLLIEALAITPFARTTYRRLSGGQQQAVNLAAALVGRPKLVFLDEPTSGMDPHARHHTW DIVEQMRHDGVSVVLTTHNMDEAQRLADHVWIVDRGRVATHGTVLELTAESSLEDVFLTH TSDRAAGRN >gi|302034492|gb|GL383259.1| GENE 64 87232 - 89715 2387 827 aa, chain - ## HITS:1 COG:PAE1771 KEGG:ns NR:ns ## COG: PAE1771 COG3808 # Protein_GI_number: 18312865 # Func_class: C Energy production and conversion # Function: Inorganic pyrophosphatase # Organism: Pyrobaculum aerophilum # 140 784 90 721 721 213 31.0 1e-54 MKRLRSCALPILLTTLALAGCGSGGQTKGGGGGEANLKLPPLNEHVGNISGTALLWIGLV ICLFGLGFGLVTYAKLQKLPVHEAMHEVSELIYETCKTYLKQQAKFLMLLWAFIAAVIVV YFLLLEHMGAKVLIILLFSLVGMAGSFGVAWYGIRVNTFANSRTAHASLRGSPWETFDIP MRSGMSIGMVLISVELTLMLFIMLVLPGDLAGPCFIGFAIGESLGAACLRIAGGIFTKIA DVGADLMKIAFHIKEDDARNPGVIADCTGDNAGDSVGPSADGFETYGVTGVALITFVLGA VPDQTEQVQLLVWIFVVRVVMLIASFVSYLINNAVAKARYGTVSEMDFEKPLSSLVWITS VMSILLTVLTTRWMLGSMGDGTMWWKLSIIISCGTLAGALIPELVKAFTSTNSRHVREVV TSAREGGASLDILSGLVAGNFSGFWLGIIIVALMGASFLVSGAGSGLGDMGAMSEVKWAV FAFGLVAFGFLGMGAVTIAVDSYGPVTDNAQSVYELSTIEDIPNVSDELKKHYGFAPRWD IAKHILEAQDGAGNTFKATAKPVLIGTAVVGATTMIFSIIMMLTEGLSNAAEVNKLGLTH APFLLGLITGGAVIYWFSGASMQAVTTGAYRAVEFIKNNMQLDQNATKASSKDSKKVVQI CTEYAQKGILNIFLGVFFAALGFAFVDPYFFIGYLISIAIFGLYQAIFMANAGGAWDNAK KIVEVDLDAKGTELHDASVVGDTVGDPFKDTSSVALNPVIKFTTLFGLLAVELAVSIGAG LLTYILAAVFILVACVFVYRSFYGMRIDSTKDPDEFGVVAKEAGSGS >gi|302034492|gb|GL383259.1| GENE 65 89879 - 90940 570 353 aa, chain - ## HITS:1 COG:BS_degA KEGG:ns NR:ns ## COG: BS_degA COG1609 # Protein_GI_number: 16078147 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus subtilis # 5 332 4 333 337 157 29.0 3e-38 MSGPTLADIAYQAGVSQATVSRVLNDKPGVSSPTRQCVLTALDVLGYQRPTHLKPVTTGL VGLIVPELTNPVFASHAQAIETLLSREGYATAVCTQAPGGMREDDYIRVLQSRQVAGIIV MSGSHADTTADMSTYHELVDVGLPLVLVNGYSPSIAVPQISDDDISAMDQAVAHLVGLGH KHLGLAVGPRRYVPVQRKEQGLRAAMDRHLEGRGRVTVSNTVFSVDGGARAAVDLLGQGV NAIICGSDLMALGAIRAARAQGLSVPDDVSVIGCDDSDLMRYTDPPLTSLRQDVELISTM AVQSLMGSIRGDTAFFGERLVRPELVIRGTTASARASTMNPSVSRQHSAALCL >gi|302034492|gb|GL383259.1| GENE 66 90966 - 91871 986 301 aa, chain - ## HITS:1 COG:SA0209 KEGG:ns NR:ns ## COG: SA0209 COG3833 # Protein_GI_number: 15925920 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type maltose transport systems, permease component # Organism: Staphylococcus aureus N315 # 38 301 22 278 279 209 43.0 4e-54 MSTATVSSAIKDANRNTPFSKRFKSQWWRHLLGIIAVVFAAFPLVYVLSASLAPGGTLTG SNKLFSQTDFSNYSKLVSDPVRPYAQWYLNTLIIAAVTAVLTVFLGALAAYSFSRMRFKG RRGGLLALMLVQMFPQLLTVVAIFLLLTWLGDVYPVLGIGSRLALIMVYLGGALGANTYL MYGFFNTVPQSLDEAARVDGAGHARIFFTLILPLAAPILAVVGLLSFIGSFTEYVVASVI LGADPHTSTLAIGLYQYVSTENSSNWGVFAAGAVLAALPPMVLFLWLQKYIVSGLTGGAV K >gi|302034492|gb|GL383259.1| GENE 67 91871 - 93475 1311 534 aa, chain - ## HITS:1 COG:VCA0944 KEGG:ns NR:ns ## COG: VCA0944 COG1175 # Protein_GI_number: 15601697 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Vibrio cholerae # 33 528 26 520 524 265 35.0 1e-70 MSSSLTINRKAREKRVAAASGKYSGSLWAWITKIALLGILDAIAVYGVMTAIAHSSPLMA IVIAAVAIIVTVIYLPPNRMLPAKYLAPGIIFMVIFSVGVMAYTIYVGFTNYGDGHNGSR DDAVAAIQRNHQERVPNAPAYNSSVAEKDGKLALIVIDPGTKKVHAGTPNQPLEPVEGAE LNSLGKIKNLPGYRVLPFSEVSQRSNEISQLRVPVSKDSSAGFIRTTTGSQAFEFISTMT YDKKAGTMTDKKGTVYRDNGRGNFVSASGKSLEPGWKVTVGFFNFKKALTDHGVRGPFLR VTAWTFAFAVLSVLTTFALGLALALLFNDASMKGQKTYRILMLLPYAFPCFLSALVWSGM FNQEFGFINQVLLGGVSIPWLTNPWIAKAAVLIVNLWLGFPYMFIVSTGALQSIPSDILE ASRLDGASTWRIFTMIKLPLLMVPLAPLLISSFAFNFNNFVLIYMLTLGGPRFTDTSLDV GATDILISMVYKVAFSGAQRDYGLASAFSVIIFIIVGVISWLGFRQTKSLEEVN >gi|302034492|gb|GL383259.1| GENE 68 93576 - 94769 1158 397 aa, chain - ## HITS:1 COG:TM1204 KEGG:ns NR:ns ## COG: TM1204 COG2182 # Protein_GI_number: 15643960 # Func_class: G Carbohydrate transport and metabolism # Function: Maltose-binding periplasmic proteins/domains # Organism: Thermotoga maritima # 24 386 18 383 391 212 32.0 1e-54 MVATTPPPHPRPRHTGKNSSAAGAAGSILVWTDSNREPVLRKVAEQFKSDTGVTVKLAVK DFAKIPDDFITQAPTGKGPDAAIAAHDATGRMVQNGVIAPLELGEISAYQDVAIQAFTVN GKIYGVPYATENIALVRNTTFVKDAPKTFDDMIEMGKKSGAKYPFLVGLDPKQSDPYHLY PFQASFGAPVFELKDKGFDSSKVAMGGTNGEKFASWLADQGKTKNFNLNVSQDISKDLFA KGQAAFILTGPWSLDSFTKAGIKYEISEVPSAGDRPATPFVGVQGFWMSAKTKDAVATQK FLVEYIGNPNVQTELFKVGHRPPASKQAFEKAKTDKDVAAFGAVGQKAVPMPNIPAMGSV WADWGVAQAEIISGKASNPKATWDAMVKAIDDKIKKV >gi|302034492|gb|GL383259.1| GENE 69 94787 - 94978 82 63 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4619 NR:ns ## KEGG: HMPREF0675_4619 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 19 63 1 45 45 75 100.0 5e-13 MAATPRLPRSIERRVMSDMGSHLSRQLDAHRRARVLTLGGHFVVTALQADAILAKSFMGV QGV >gi|302034492|gb|GL383259.1| GENE 70 95139 - 95342 142 67 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MATYRRRCQTKTIGQFTGRRRTIVQDGRHHTISRGAVRSLLLVLADDVATCDGHLGVGRI FHNSIVA >gi|302034492|gb|GL383259.1| GENE 71 95256 - 95921 415 221 aa, chain + ## HITS:1 COG:ML0592 KEGG:ns NR:ns ## COG: ML0592 COG2345 # Protein_GI_number: 15827238 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Mycobacterium leprae # 4 198 50 247 254 150 45.0 2e-36 MSSILHNGPSTASELADRLGLTAAAVRRHLSALVSRGLVDSREKKVFGARGRGRPSRVFF LTDHGRADYYTAYDDLAISALRQLADAAGPSALDAVAKARVDDIESRYRALRQARPDEVP AQLLAEVLSADGYVATIQPAGAGQQICQHNCPVAEVAKVFPQLCNVETQLFSELLGSHVQ RLATIAHGDGVCTTHVPVDVEITRRALAEPSKSPSIRKDHS >gi|302034492|gb|GL383259.1| GENE 72 95918 - 97366 1435 482 aa, chain + ## HITS:1 COG:Cgl1527 KEGG:ns NR:ns ## COG: Cgl1527 COG0719 # Protein_GI_number: 19552777 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, permease component # Organism: Corynebacterium glutamicum # 16 482 15 481 481 770 78.0 0 MTQVDTPASLPGAGASQDEHLAALSGYKYGWHDSDAYAAASRRGLSEDVVRGISAMKHEP QWMLDMRLKALKLFQRKPMPTWGVDISTIDFDQIKYFVRAQERQAASWEDLPADIKNTYD RLGIPEAEKDRLVAGVAAQYESEVVYHKINEELGKQGVVFLDTDTALKEEPELFREHFAS AVPLGDNKFSALNSAVWSGGSFIYVPKGVHCTIPLQAYFRMNTENLGQFERTLIIVDEGA YVHYVEGCTAPIYKSDSLHAAVVEIIVKKNARCRYTTIQNWSNNVYNLVTQRAYVEEGGT MEWIDGNIGSKANMKYPACYLMGPHAKGEALSVAFAAESQHQDTGAKMVHKAPYTSSTIV SKSISQGGGRSAYRGLVSVGKDAHHSSSAVRCDALLVDDISRSDTYPYNDIRTDEVSMAH EATVSKVSEDQLFYLMQRGLTEEEAMAMIVRGFIEPIAKELPMEYALELNRLIELQMEGA VG >gi|302034492|gb|GL383259.1| GENE 73 97419 - 98627 978 402 aa, chain + ## HITS:1 COG:Rv1462 KEGG:ns NR:ns ## COG: Rv1462 COG0719 # Protein_GI_number: 15608600 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, permease component # Organism: Mycobacterium tuberculosis H37Rv # 29 389 23 385 397 264 41.0 2e-70 MSAPVAAPGKGHNVTIENDVESHLHPTPSWEIADHPMPTGREEIWRFTPIKTFIPVLSEV ALEPRQEAGIIDVDVKRADGITVTDLATSELKKLAETPQDRLSALAAADPHAVNRRVVIP AETSLKAPVEVTVAGHNDEIACHHNVVVEIGNHAEVTVIVRHRGVAHLGENWTFRIGDGA QATVLFVQEWDDAAIHGAQVSFEIGRDATVRTAQASFGGKAVRICQTASYNGPGGNLTQL GAYFADAGQHIEHRLFVDHNAPSTESHVDFRGCLQGKDAHSVWIGDVLIRPVAEDIDTYE SNKNLVLTEGCRADAVPNLEIQTGNIRGAGHSASTGRFDAEQLFYLQSRGVEEAEARRLV VHGFFTDIVRKIGVPEISEELVARIEAELVESLGSSPSVEEG >gi|302034492|gb|GL383259.1| GENE 74 98627 - 98950 277 107 aa, chain + ## HITS:1 COG:SSO2080 KEGG:ns NR:ns ## COG: SSO2080 COG2146 # Protein_GI_number: 15898866 # Func_class: P Inorganic ion transport and metabolism; R General function prediction only # Function: Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases # Organism: Sulfolobus solfataricus # 4 99 5 108 108 61 32.0 4e-10 MSVVTTLSALKENSPQEFEVDGIDVVLVRTDGEVFAVGATCTHAEVPMVDGEVVDCGLEC YMHGSFFDLRTGEPRSLPATEPLSVYPVTIDGDNVLVDVANPITKES >gi|302034492|gb|GL383259.1| GENE 75 98957 - 99730 906 257 aa, chain + ## HITS:1 COG:Cgl1525 KEGG:ns NR:ns ## COG: Cgl1525 COG0396 # Protein_GI_number: 19552775 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, ATPase component # Organism: Corynebacterium glutamicum # 1 248 1 251 252 330 64.0 1e-90 MATLQINDLHVDVETEAGPKQILKGVDLTINSGEVHAIMGPNGSGKSTLAYTLAGHPKYT VTGGSVTLDGEDLLAMTVDERARAGLFLSMQYPVEVPGVSVANFLRTARTAIEGRAPKLR TWVKEVNETLTRQELDPDFAERSVNEGFSGGEKKRSEMAQLELLHPRFAILDETDSGLDI DALKVVANTVNRYMTDPEHGLMLITHYTRILRYVKPTQVHVYVDGRVAATGGPELGEELE AEGYEKYLSAAKANASL >gi|302034492|gb|GL383259.1| GENE 76 99727 - 100968 976 413 aa, chain + ## HITS:1 COG:Cgl1524 KEGG:ns NR:ns ## COG: Cgl1524 COG0520 # Protein_GI_number: 19552774 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine lyase # Organism: Corynebacterium glutamicum # 2 409 10 419 421 402 50.0 1e-111 MSYDVEKIRKDFPILSTRVGDYPLTYLDSANTSQKPQVVIDTLSDHYARHNANVARAMHQ LGLESTQAYEGGRERLARFIGAARPEEVVALSNASEALNLCAYTLGERLGPGDEIVISVM EHHSNLVPWQIICQRTGATLRWFDITDDGRLDLEKAEAEGLINGRTKVVSLTLASNVLGT INPIGMIAEQAHSVGAVMVVDASQAVPQMPVDMTTLGADLVAFTGHKMCGPTGIGILWGR YDLLAELPPFLGGGEMIEVVRMEGSTYAEPPHRFEAGTPPIAQLAALGVAADYLDGIGMQ AIAEHEHELAARMLEELQTVKGVHILGPSDATARIGTVSFTIEGVHPHDAMSIMDGHGVA VRGGHHCARPLHERLGIQSSLRASSYLYSTTDEVDRLVESVEYARNFFAGGAA >gi|302034492|gb|GL383259.1| GENE 77 100965 - 101465 369 166 aa, chain + ## HITS:1 COG:MT1512 KEGG:ns NR:ns ## COG: MT1512 COG0822 # Protein_GI_number: 15840925 # Func_class: C Energy production and conversion # Function: NifU homolog involved in Fe-S cluster formation # Organism: Mycobacterium tuberculosis CDC1551 # 1 145 3 149 162 158 54.0 5e-39 MNVEEMYQQIILDHYREKHHSGLREGYDAEVTQVNPSCGDELLLRVHVDGDVITDVSYDA VGCSISQASTSVMTDLVIGKTIGEAQDLYRGFQEMMRSRGTVELDEDIYEDAVAFEGVAK LMARVKCAMLGWSALEDSLLKVTEGSPDKVGSVSGTDSNETKEESR >gi|302034492|gb|GL383259.1| GENE 78 101462 - 101818 442 118 aa, chain + ## HITS:1 COG:Cgl1522 KEGG:ns NR:ns ## COG: Cgl1522 COG2151 # Protein_GI_number: 19552772 # Func_class: R General function prediction only # Function: Predicted metal-sulfur cluster biosynthetic enzyme # Organism: Corynebacterium glutamicum # 17 118 34 137 137 112 55.0 2e-25 MSEENALPGQEVTLTAMPTVDDVIEAMKDVIDPELMVNVVDLGLVYGVNIDGEGNVTIDM TLTSPTCPLTDRLEYDTQTVLEGIVKSVTINWVWLPPWGLERITDDGRAQLQAIGFNV >gi|302034492|gb|GL383259.1| GENE 79 101892 - 103904 1407 670 aa, chain - ## HITS:1 COG:CAC3371_1 KEGG:ns NR:ns ## COG: CAC3371_1 COG1902 # Protein_GI_number: 15896613 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Clostridium acetobutylicum # 5 405 4 401 401 499 58.0 1e-141 MSEIHRILFEPTTIGSIHVKNRYAMGPMGPLGMSTAEGGWNQRGIDYYVRRAAGGIGLII TGVCQVTNPIEHLPSGTLPNPTLSPASFLRTSREMTERVHAHDSRIVLQVGAGSGRVIMP VVLRQGERPAAPSEIPYKWNPHITCREITTDEIHQIVAQFRIAAKVAYEAGFDGIQVHAC HEGYLLDQFATEKFNHRTDEYGGSLENRLRFPREIVEAIHETVGDDFPVQIRFSPKSMMK DWNVGALPDEDFEEVGRDMPEGIEAARLLHSYGYEALDIDVGCYDAWFWNHPPMYQAKGL YLPYASELKEALPDIPLIVAGRMDDPDLAANAVSDGIVDMVSLARPTLADPDIVVKLQTD HAERVRPCISCQEGCLGRIGTYTVLNCSVNPEAGREADTHLHPVLPHDAKRVLVIGAELA GMEAARVLSERGHEVVIVEASNHIGGVVLAGGQPSFKEDDLALLEWYRTTLEELGVEIRL NTPATADLIASFGADHIILATGSTPRRLNLGDDTKVIDATDALLNRNALGSKIVIIGGGL TGCELALAMREVDAEVTIIEAEANILTHNAPLCVANEDMLRRLVPFRGITVMADAKALHT TPKGLMTEVNGHEQEIPADTVVTAIGYLPEQDLRGAVEATGLPFNVIGDARKPANIMYAI WDAYEVAAVI >gi|302034492|gb|GL383259.1| GENE 80 104344 - 104799 285 151 aa, chain - ## HITS:1 COG:no KEGG:PPA1540 NR:ns ## KEGG: PPA1540 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 151 1 151 151 275 100.0 5e-73 MKVYIALVKACTTSVGTISPRRTRHHAPYLDRMSDMSMPRRAAPEDDTDLADAARSWRRY LILVICGVIVAVLGLGIFGYLAWWSLCDQAAGVCQRGEPVMYWCSVVSLAILGLIIGVLT QIWLEKRWWHMLAIVIPAVFIVAGIFFWLAV >gi|302034492|gb|GL383259.1| GENE 81 104818 - 105222 305 134 aa, chain + ## HITS:1 COG:elaA KEGG:ns NR:ns ## COG: elaA COG2153 # Protein_GI_number: 16130202 # Func_class: R General function prediction only # Function: Predicted acyltransferase # Organism: Escherichia coli K12 # 1 131 12 147 153 72 36.0 2e-13 MDVTTLYACLWLRSVVFNGEQQCTEPDLDGRELEPTTIIVWASVDGRPVGTLRVLDDKDH LVIGRVAVDAAYRGLHIGRRMMDLALEIAAADGREVALHAQSYLEDWYRDCGFVVTGPHC EEAGIDHVPMALRR >gi|302034492|gb|GL383259.1| GENE 82 105281 - 106879 1496 532 aa, chain + ## HITS:1 COG:ML1816 KEGG:ns NR:ns ## COG: ML1816 COG0488 # Protein_GI_number: 15827973 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Mycobacterium leprae # 1 532 1 545 545 604 59.0 1e-172 MLQVKDVEVRVGARLLLNPVSFQVATGDKVGLVGRNGAGKTTLTRVLAGEALPAAGSVRR TGELGYLPQDPRDPDMETIARARILSARGLDHMLERMRTLEHQMANGSEEDRAVAMDKYA KTEDRLIAAGGYGASAEAARIASNLGLDDRVLSQPLKNLSGGQRRRVELARILFSGADTL LLDEPTNHLDADSIIWLRSFLQSYSGGVLMISHDTELVEATVNKVFHLDANRATLDIYSM GWKLYLEQRAADEKRRHKERINAERKAAALQAQADKLHAKATKAVAAQQMARRAEKLLAG VEGERAVDKVAAIRFPDPAPCGKTPLTARNLTKTYGSLEVFAGVDLNIDRGSQVVVLGLN GAGKTTLLRILAGKETPDTGEVIAGHGLKLGYFAQEHDLLDMDRTVLENMASSATDLNET EMRKILGSFLFTGDDVHKPAGVLSGGEKTRLALATLVVSSANVLLLDEPTNNLDPASRAQ VLDAIGNFGGAIVLVTHDEGAVHALDPDRVLVLPDGTEDMWSADYAELISLA >gi|302034492|gb|GL383259.1| GENE 83 106949 - 107503 533 184 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4605 NR:ns ## KEGG: HMPREF0675_4605 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 184 2 185 185 202 99.0 6e-51 MVARAPRLVGEARQAVAEELAGRYHDGASIRSLARESGRSYGLVQKLLREAGIEFRRRGG ADPASPETKAERETVEKSQEIDQQDSVDSNTNGGGTSPSPEDIDALKLAVEAAVARAEKA DRKAHKAEKALRKLRRAGAGKSRRKKAKATLNKRRAKAEKADRKVRKARRRLDKAEHSID NRQF >gi|302034492|gb|GL383259.1| GENE 84 107532 - 108203 478 223 aa, chain - ## HITS:1 COG:Cgl1091 KEGG:ns NR:ns ## COG: Cgl1091 COG0500 # Protein_GI_number: 19552341 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Corynebacterium glutamicum # 9 201 54 258 288 121 36.0 8e-28 MTSTPAGANADTVEMIAARQRVLDAGLFGDLDARLAEILIGRDRIVEVGAGTGHHLAQVL EAHPDSHGLASDVSKAAIRRAAKAHPRMAAVVADTWAGLPIRTGCIDAGLCVFAPRNRDE FARIMKPDGIFVVVTPLPDHLQQLRERTGMIGIQPHKHDELMAALASRFTVIGHEEVRAD IPLDKQTASDAVAMGPSAHHIHNVHVDAMSITSAVEVTVLSPR >gi|302034492|gb|GL383259.1| GENE 85 108350 - 109180 428 276 aa, chain - ## HITS:1 COG:ML1644 KEGG:ns NR:ns ## COG: ML1644 COG3346 # Protein_GI_number: 15827867 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mycobacterium leprae # 8 261 12 266 270 108 31.0 8e-24 MKKLWVRWVALTLLVIVLSLVMIRLGQWQLHRLSGRREANNIIRTNHSKPPVEWSTLMGD HEVTPQQQWRPVTITGTFDTAHELQVRYRSNDDDNGSEIVTPIVTKDSRHVLIDRGFLKR SSHEGDAQTLPPAPNGVVTVTGLVKGNEHGKPTATDPVEGKVRLINSDAIGKAQGITYVS GYISTTSMAPAQRDLVPHELPKLDDGPHLSYAIQWFCFTAIAVIGLFVLIRGDIKDRRKR RAKAARSAAQRAVSGPEPNRHDASHNRGAKTPGAHT >gi|302034492|gb|GL383259.1| GENE 86 109259 - 109507 153 82 aa, chain - ## HITS:1 COG:no KEGG:PPA1534 NR:ns ## KEGG: PPA1534 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 82 33 114 114 157 100.0 1e-37 MRQRRYLWSMLVRTVCFIGLVITPSPWRWSFLVGAAVIPAIAVVLGNAADRRTTDTLPSQ QSTESQGELGSAMTIHGEVDEN >gi|302034492|gb|GL383259.1| GENE 87 109682 - 110401 240 239 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 8 233 4 238 242 97 30 6e-19 MSLDTPGRVALVTGGSRGIGAAIAADLHAQGYRVAATSRSATAPEGVLPIACDVTDADSV DVAFSQVEQELGPVEVLVANAGITRDGLLARMKEEDFTEVIDTNLTGAYRVIRRAARAMT RARFGRIVLTSSVVGLLGSPGQVNYAASKAGMLGMARSVTRELGSRGVTCNLVAPGFIST DMTEGLPEKLVSGYLERIPAKRLGSVDDVVAVVRFLVSDAASYVSGAVIPVDGGLGMGH >gi|302034492|gb|GL383259.1| GENE 88 110442 - 111215 711 257 aa, chain + ## HITS:1 COG:ML1806 KEGG:ns NR:ns ## COG: ML1806 COG0623 # Protein_GI_number: 15827964 # Func_class: I Lipid transport and metabolism # Function: Enoyl-[acyl-carrier-protein] reductase (NADH) # Organism: Mycobacterium leprae # 2 254 3 266 269 212 45.0 7e-55 MGLLEGRTVLVTGVTMHTSIAFKAAQIAQDEGARVIVSNLPRAVGVTRRAVRKLDPVPEV LELDVTDADQLAALPQQLRDLGVEKLDGVVHAIAFANPKTALGGKFLETEWDDVSVAVHT STYSYVSLMTALVDILAEHASVVGLTFDATVSWPFYDWMGVAKAGLESANRYLARYLGPK GVRCNLVSAGPLDTMAKTAIPGADAFNDVWGERAPLGWDTKDTTPAAKGIVALLSDWFPA TTGEIIHVDGGMGSTGA >gi|302034492|gb|GL383259.1| GENE 89 111221 - 111955 506 244 aa, chain - ## HITS:1 COG:no KEGG:PPA1531 NR:ns ## KEGG: PPA1531 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 244 1 244 244 399 100.0 1e-110 MLEICCRLTCLLNDLCAGRTTAPHAEAELLRMAAAHHVHDPDETLGLSEHDPLSSVPIRM ALARISHVPHDTPVLWGLLLPAPGQLAGLRGPAQVNRAALDAGAVVVCHQGSTTMPAGTA WIPHPVGSAMQWTVVRAVAPLPPPTPADAAPLLRSAICATAAQLNELSMMGGRRPDVVPP YLTGHRPADQRLLDSAWTVMMACDAGRESTMITAYGAQTRETALRQLRNAASQAVTAATS WPLT >gi|302034492|gb|GL383259.1| GENE 90 112070 - 112855 197 261 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 1 233 1 224 305 80 27 6e-14 MSAAAQLAGVGVRRGDRWILDNVNLDVLDDQRWVLVGPNGAGKTTLLQVLGAQLHPTVGL VEILDEILGAVDVFELRPRIGMACSVLAHRIPESEKVGNMVVSAAWAVVGRWREAYDEQD LARADALLERMGLGGMGDRMWGTLSEGERKRVEIARALMTDPELLLLDEPAAGLDLAGRE QLIEVLSAIFTDPDAPASVLVTHHLEEIPAGITHALVMAEGRIVAAGPVETTLTSEVLSG AFGMPLMVSHIDGRWNARAAR >gi|302034492|gb|GL383259.1| GENE 91 112882 - 113349 352 155 aa, chain + ## HITS:1 COG:ML1803 KEGG:ns NR:ns ## COG: ML1803 COG1585 # Protein_GI_number: 15827961 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Membrane protein implicated in regulation of membrane protease activity # Organism: Mycobacterium leprae # 11 147 5 140 143 77 37.0 8e-15 MLESFGEHRWLLWAVASAVLACTEMLSGEFTLLMLAAGAGAGAITAAIVPGMWLLQVIVA AVVAALLLTVLRPTLLRRVREAPGYRSALDKLVGSDGVATSDITDGHGQVKVDGEEWSAR ALEPGSTIAAGEKIEVYEIDGATLVVYPVFRSLSS >gi|302034492|gb|GL383259.1| GENE 92 113430 - 114596 1102 388 aa, chain + ## HITS:1 COG:MT1533.2 KEGG:ns NR:ns ## COG: MT1533.2 COG0330 # Protein_GI_number: 15840949 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Mycobacterium tuberculosis CDC1551 # 9 314 13 325 381 297 50.0 3e-80 MPQFIPSLVIIVLLVVVLSSSIKIIHQQKIGLVERLGKFNRRLNPGPHLLIPIIDRVQHN LDMREQVVPFPPQGVITEDNLMVKIDSVIYFQIVDPERAAYEAQSYKTAIEQLTMTTLRN IIGGMDMEAALTSREEINQKLRSVLDEATGKWGIKVNRVELRAIEPPPTIRDAMEKGARA ERDKRAAILLAEGQRQSQVLSAGGDRESAILRAQGDREAAVLRAQADRQAQMLRAEGEAQ AITTVFNAIHAGQPDQGLLAYQYMQMLPTLARGDSNKVWVVPSELNDALKGIGSLAGKDE HEPGKGGFAAADPSQFAAPEKIDVFAEIEAQKAEEKEASEATVQQAIQEAAKLENPGLSG KRSMGGGQITPAPAEQQTISEQGSGQVE >gi|302034492|gb|GL383259.1| GENE 93 114794 - 115780 924 328 aa, chain - ## HITS:1 COG:Cgl2983 KEGG:ns NR:ns ## COG: Cgl2983 COG0385 # Protein_GI_number: 19554233 # Func_class: R General function prediction only # Function: Predicted Na+-dependent transporter # Organism: Corynebacterium glutamicum # 12 322 10 317 326 280 52.0 2e-75 MSSANPRRTLPIDGFVLAIVVTAIIGSMLPATGSAVPVVKHGVTVLIFILFFLYGARLEP RETLDGLKNWKLQGAILASTFVVFPLIGLAMRALVPWALPSTLYVGMLWICLVPSTVQSS INFTSIAHGNVAGAIVAATTSNLLGTFLTPLLALLLMSTSGGLTIQPSSFLDVIVQLLLP FVLGQLSRRWTADFVTEHRKSLKYVDQGSIILVVYSAFSEGMREHMWSLVSPASMVVLTL ICLALLFFMLWLTWTGSGWLNFNRNDRIAIQFCGTKKSLATGLPMATVLFAGQPVGLIVL PLMIFHLAQLIACGMLAGRYARQWEVEQ >gi|302034492|gb|GL383259.1| GENE 94 115813 - 116622 198 269 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 [Bacillus selenitireducens MLS10] # 75 267 49 242 255 80 29 5e-14 MATFIDIDDPADPRLADYVNLRDVNLRKSLEAEHGLFIAEGAKVIRRACEAGYPPRSFLL APRWIDGLRDLFDGLDVEVFVVSETLAEQVTGFHVHRGALASMCRQTRWSAADLMAARRL VVCEDIVDHTNVGAIIRCAAGIGWDGVLLAPRAADPLYRRAIKTSMGTVFQLPWARLEDW AGGLGELRDHGFTVAAMALSGDSVTLDEFSADLRQNPRKVALLMGTEGAGLSAHWISQAD VVVRIPMAGGVDSLNVAAAAAVACYELRG >gi|302034492|gb|GL383259.1| GENE 95 116629 - 117231 426 200 aa, chain - ## HITS:1 COG:Cgl2682 KEGG:ns NR:ns ## COG: Cgl2682 COG0242 # Protein_GI_number: 19553932 # Func_class: J Translation, ribosomal structure and biogenesis # Function: N-formylmethionyl-tRNA deformylase # Organism: Corynebacterium glutamicum # 20 177 2 162 193 122 41.0 6e-28 MRKHTPNDNPLWEDLFKGGSLRRVTRWGESVLHAQTRPVTEFDEDLTTLIRDMFATMNAA DGVGLAATQVGVDLSLFVYACPDANNIVHHGAFCNPVVTLPEGHDRHLEAADEGCLSWPG GFQSMARPDLATCTGQDPWGNDITVTGTGFFARCLQHETDHCNGIVFGDRLSKRARRKLD EQHDSVAHLYPDDWPLTPKG >gi|302034492|gb|GL383259.1| GENE 96 117298 - 118380 571 360 aa, chain - ## HITS:1 COG:RSc0049 KEGG:ns NR:ns ## COG: RSc0049 COG2706 # Protein_GI_number: 17544768 # Func_class: G Carbohydrate transport and metabolism # Function: 3-carboxymuconate cyclase # Organism: Ralstonia solanacearum # 80 357 147 411 418 66 28.0 8e-11 MAVTPVLACYRTCDAAIGGITAWQVTTGPDGPRTNVVGSCPLGDASWVTPLYHLVVVLCE RDGTLVVVHPGREFQVVGTVQLKGQWPCHGAVDPTGRLMAVADYASGQVEFVDLSDPTRP TVRNVLDLGQGCVFPRPVADRQEGPHAHQVTWLDRAHLAVTDLGADRINVVRWSEAGPEI IGSLKTPAGCGPRHLTLTEDGRKQILTVGGALSGTVSTWSRPTGHDMWAREWRFVQETAS SRWSHTGSQERRSACAPASPSAIVTTPDGRHFVANRSVGSIGILGGRFGRINLIDEFDTT GANPRDITVTTQNGTRVWVALPEEGQIAIHLRDEDTGGWQVETTIDQPGAMRVIVGPTTG >gi|302034492|gb|GL383259.1| GENE 97 118305 - 118547 98 80 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|314923771|gb|EFS87602.1| ## NR: gi|314923771|gb|EFS87602.1| hypothetical protein HMPREF9603_00728 [Propionibacterium acnes HL001PA1] # 1 75 44 118 118 123 93.0 5e-27 MQTDLLMSSVIVTDRDLRQLIFQLWITRQHRTSPPVDNRLTFFSLVSPRSRVGSHPWLSP QFLPVTALAMPQSEALPRGR >gi|302034492|gb|GL383259.1| GENE 98 118528 - 119286 301 252 aa, chain + ## HITS:1 COG:Cgl1980 KEGG:ns NR:ns ## COG: Cgl1980 COG0739 # Protein_GI_number: 19553230 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Corynebacterium glutamicum # 46 168 42 164 164 90 44.0 4e-18 MRRSVCISLLIITVGICLLALPAPSHSVAAVPARSVANRPTPPVLGPVIKGFAPPAEKWL PGSRGVEFAASVGEPVTTVTAGVVVFAGQVAGAGVVSILLADGRRTTHMPVVPSVAVGQV VVPGQQIGVVGMGPPCTRTCLHWGLKKGDVYQNPMTLLQLQVRLLPLDSRPHSASGHGWP VRPLSLPGGSKRKAASSGALMPPWRGAGRDAALGIDTTVTEATRGGSGAGMSLAKRSAQS FGGNVGVDLRGG >gi|302034492|gb|GL383259.1| GENE 99 119206 - 120153 550 315 aa, chain - ## HITS:1 COG:Cgl1981 KEGG:ns NR:ns ## COG: Cgl1981 COG0582 # Protein_GI_number: 19553231 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Corynebacterium glutamicum # 2 315 13 315 315 228 43.0 1e-59 MKKPSPTRVGAGQLPMSLTVPVEDFCGHLSALRRSPNTIRGYRADLIDLMGHAHSHGDDT LGRIGTSQVRAWLADTRVAGASAATMQRRWSAARVFFRWAANEGLISADPTTALNSAKVP KRLPATLGVDQARHILDEAVAQARHDESPHGARDAAILEVLYGGGLRVGELCGLDLGDVD RSRRTVKVTGKGDKERTVPMGAPALRAIDTWLPRREEWVGPHSGQALFLGARGRRIDQRV VRRVVHTDLRAEPDSPDLGPHGLRHAMATHLLEGGADLRTVQDILGHESLATTQIYTHVS TERLRTAFRQAHPRA >gi|302034492|gb|GL383259.1| GENE 100 120020 - 120298 72 92 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MHAKSVRNDPDCAISLRHQEAIKLTFPLTPATSACLPTMAAITGHSGCDEEAIPDARWRR TAAYVPDGARRGLLWPPLGSPTLAQHNPRLPS >gi|302034492|gb|GL383259.1| GENE 101 120441 - 121292 1436 283 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50842999|ref|YP_056226.1| 30S ribosomal protein S2 [Propionibacterium acnes KPA171202] # 1 283 1 283 283 557 99 1e-157 MAVVTTRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLHQSLTYIDKAYAFVKET VAKGGQILFVGTKKQAQESIVEQATRVGMPYVNHRWLGGMLTNFQTISKRIARLKELEAM DFDKVSGSGLTKKELLMLSREKDKLEKDLGGIRDMPKVPQAVWVVDTKKEHLAIDEARKL KIPVVAILDTNCDPDEVDYAIPGNDDAIRSVSLLTRIIADAAAEGLMARSAGKSGEQPAE AEPMPDWERELLEGDGAKTEAKAEEPKAEAKKADEAPEAEKSN >gi|302034492|gb|GL383259.1| GENE 102 121327 - 122139 428 270 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts [Haemophilus influenzae R2866] # 3 270 4 262 283 169 38 1e-40 MAITAAEVKKLRDATGAGMMDAKKALTEADGDFDKAVDILRVSGAAKAAKRSDREASNGL VAAAGSSLVHIGSETDFVAKNEEFIAAAHEIAEAADKAGADSKDAANAAALADGTTVGDK LGELAAKIGEKIELANAAHFDGNAHVYLHRRSQDLPPQVGVMVEYEGDNIEAVHGVCLQI AAMSPRWLSRDEVPADVVEHERTVAADIAREEGKPEKIIDRIVEGRLGGFFKENCLLDQP AISDDKKTVAQTLEAAGVTLKRFVRFSAGE >gi|302034492|gb|GL383259.1| GENE 103 122005 - 122268 64 87 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTATIAVRPSRDRHSLGNDERPHLVRWDRSSSQSRYHPHVGTRSLSGRKANETLEGDTSG LKGLGDGFLVIGNGRLIEQAVLLEEAA >gi|302034492|gb|GL383259.1| GENE 104 122324 - 123037 699 237 aa, chain + ## HITS:1 COG:Cgl1977 KEGG:ns NR:ns ## COG: Cgl1977 COG0528 # Protein_GI_number: 19553227 # Func_class: F Nucleotide transport and metabolism # Function: Uridylate kinase # Organism: Corynebacterium glutamicum # 9 235 1 226 228 298 67.0 6e-81 MPERYNRVLLKLSGEVFGGGGIGVDADVVSAKAREIAEIANSGVQVAVVVGGGNFFRGAE LQQHGMQRDRADYMGMLGTVMNCLALQDFCEKAGVDTRVQTAITMGQVAEPYIPRKAERH MEKGRVVIFGAGSGMPYFSTDTVAAQRALEIGADALLMGKQGVDGVYDSDPKTNPNAHKF DELTYDEFLSRDLKVADATAVAMARDNDLTMVFFNLEMPGNISRVINGEDIGTTVHR >gi|302034492|gb|GL383259.1| GENE 105 123070 - 123624 690 184 aa, chain + ## HITS:1 COG:Cgl1976 KEGG:ns NR:ns ## COG: Cgl1976 COG0233 # Protein_GI_number: 19553226 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome recycling factor # Organism: Corynebacterium glutamicum # 1 184 2 185 185 186 52.0 2e-47 MSDIIKDAEKKMGSAVDHAREEFAAIRTGRANPAMFNKLMVEYYGTPTPLQQLASFQVPE ARTVLIAPFDKSCVNDVEKAIRDSDLGVNPSNDGNVVRCVLPALTEERRKEYIKMAKTKA EEGRIAVRNVRRASNDVVKKQEKDKEISEDEMTRLEKELDQVTRKYVEQIDELLKSKESE LLEI >gi|302034492|gb|GL383259.1| GENE 106 123780 - 124499 554 239 aa, chain + ## HITS:1 COG:ML1589 KEGG:ns NR:ns ## COG: ML1589 COG0575 # Protein_GI_number: 15827833 # Func_class: I Lipid transport and metabolism # Function: CDP-diglyceride synthetase # Organism: Mycobacterium leprae # 59 238 116 311 312 148 45.0 7e-36 MTLALMAGAIELHRAMVRLGMDSAVVPICVGTAVMVIGAYAASTLKLHILPNTFLVVTLG ATTVAAMAWRLPRGSHGFVKDAAASLFTIAYLPLLGCFVPLMMGDDGGSRRIATWILSVV ASDTGGYAVGVLCGKHKLAPRISPKKSWEGFAGSVITAAFVGWACLGGLLSAPWWAGIVL GVVLALTGTAGDLVESMIKRDAGIKDMSNFLPGHGGVMDRLDSVLFSAPFAWLVMSLVL >gi|302034492|gb|GL383259.1| GENE 107 124583 - 124756 165 57 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGAKMDIIIMVLIAALVLTMILRGVRKSIFIVSVMVIAALCVILLSLHATSDLGLSW >gi|302034492|gb|GL383259.1| GENE 108 124750 - 125400 421 216 aa, chain + ## HITS:1 COG:STM1864 KEGG:ns NR:ns ## COG: STM1864 COG1495 # Protein_GI_number: 16765205 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Disulfide bond formation protein DsbB # Organism: Salmonella typhimurium LT2 # 45 192 26 167 204 76 34.0 3e-14 MVRNYDIEVESLSDAERTPSRAGRVFPIVGFWGANLFVLAYIGVLAGGFIVQFGLHEFPC PLCMLQRYSMMLASLGPLYIIVRTRRGSVTMADFCLGYGVSILSAVLGAAESARHILLHI QPGDPGYGSKAFGLSTYTWAFITFTIVIAFCGVMMTFAPWLTPRGVKAHAISTVIMWLFA LIVVANLVMIVFLEGLHFLLPGDPACYELVQNCSPR >gi|302034492|gb|GL383259.1| GENE 109 125560 - 126690 835 376 aa, chain + ## HITS:1 COG:Cgl1973 KEGG:ns NR:ns ## COG: Cgl1973 COG0820 # Protein_GI_number: 19553223 # Func_class: R General function prediction only # Function: Predicted Fe-S-cluster redox enzyme # Organism: Corynebacterium glutamicum # 3 367 10 362 366 390 55.0 1e-108 MVNTPNRAKPPRHWIDLSIEERVQAVKDFGVPAFRARQISAHVFERWEVDPTQWTDLPKA ARQEIADAWFPVLLTKVSQQSCDRGTTVKTLWRLHGGALVESVLMYYPATRHSAARATLC LSSQAGCGMACPFCATGQGGIQRNMSTAEIVSQVLAANRLIAAGEVPGASGRVHNIVFMG MGEPMANYRSVLTAIRTLTADGPDGVGMSARALTLSTVGLVPRIKALTQEGIPVTLAVSL HAPDDELRDELIPVNRRWKVDELLDAAWHYAEKTKRRVSIEYALMKDINDQADRAAVLAR QIRRRGDWTWAHVNLIPLNPTPGSRWTASRPEDQDAFVETLERWKIPVTVRDTRGSEIDG ACGQLAAVGRSEGLGS >gi|302034492|gb|GL383259.1| GENE 110 126775 - 127221 439 148 aa, chain + ## HITS:1 COG:SMa0228 KEGG:ns NR:ns ## COG: SMa0228 COG0334 # Protein_GI_number: 16262575 # Func_class: E Amino acid transport and metabolism # Function: Glutamate dehydrogenase/leucine dehydrogenase # Organism: Sinorhizobium meliloti # 1 144 3 149 448 200 67.0 9e-52 MDRQLENAYESVLRRNPGEAEFHQAVREIFESLGPVLDTNPQYVEAAVLSRICEPERQII FRVPWVDDEGKIRINRGFRVEYSSVLGPYKGGLRFHPSVYLGTIKFLGFEQIFKNALTGM PIGGAKGGSDFDPHDASRLRSCDSASPS >gi|302034492|gb|GL383259.1| GENE 111 127197 - 128111 939 304 aa, chain + ## HITS:1 COG:SMa0228 KEGG:ns NR:ns ## COG: SMa0228 COG0334 # Protein_GI_number: 16262575 # Func_class: E Amino acid transport and metabolism # Function: Glutamate dehydrogenase/leucine dehydrogenase # Organism: Sinorhizobium meliloti # 1 304 144 448 448 443 70.0 1e-124 MRFCQSFMTELYRHLGEHTDVPAGDIGVGSREIGFLFGQYKRITNRHESGVLTGKGLTWG GSLVRTEATGYGTVFFVQRMLATNGKSLDGLRVTVSGSGNVAIYAIEKAQDLGATVVACS DSSGYVVDEKGIDVALLKQIKEVERARICEYAARRDSATFHSDGSIWDVPVDVALPCATQ NELNGQAAATLIRNGVVAVAEGANMPCTPEAVHSFQDAGVIFAPGKASNAGGVATSALEM QQNAARDSWDFDATEARLQQIMADIHDRCIETADEYGHPGDYVMGANIAGFTKVADAVIA MGVV >gi|302034492|gb|GL383259.1| GENE 112 128089 - 129180 739 363 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4579 NR:ns ## KEGG: HMPREF0675_4579 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 363 1 363 363 700 100.0 0 MSTTHIEIETVDQLRAAAPNLAGQVVQGVDLTGCSNLLRHCDVSTTIFLGCSTSARLAAW LRARGALIFPAIPGVPFDPYHPGAYTAEELYNDIGEGYHVTLDAAIDRWRRGLATPPRLR DTLATALHDDAMTDALDDLLAGTDPSMTVGVMGGHSVTRDSDDYRLAADLGAALAGTGHL VTTWGGPGAMEATNLGAACPPDLLDESLDRLRKVAGTADVTTWVQAGLDVVSSWPQGAAH RTIGIPTWFYGHEPPNVFATSIIKYFSNALREDILLNRCRGGIIYLPGQAGTVQEIFQAL TGNYYATSEDEMTPLIMLGNRYWSQTLPAWPLLHSMSRDHPHRIRLVDTVDEAVAALRRH PSR >gi|302034492|gb|GL383259.1| GENE 113 129177 - 130550 781 457 aa, chain - ## HITS:1 COG:SMb20965 KEGG:ns NR:ns ## COG: SMb20965 COG1680 # Protein_GI_number: 16264838 # Func_class: V Defense mechanisms # Function: Beta-lactamase class C and other penicillin binding proteins # Organism: Sinorhizobium meliloti # 23 302 42 318 332 82 27.0 1e-15 MTDSVLDVTADALEQAGAHPHRLVVRQHGQVVGRRRWAPWSPDVPSLVYSCSKTFTSAAV GIAVNRGAFGYDDTLADLWPQACTANTGPVAKSMTVRNALSMSTGHSPEQLLEPTLMSRR LPDLNTARILLATEPEGRPGIDFAYNNLATWMLSRLVAQHTGEDVDTIITKEVLDPIGAG PHTWVRDADGIPMGFSGLHIDAEDLSLFGQLLLDDGVHEGARLLPEEWIRQHRVRQVNCD SETDPEWGMGYGWQTWMSSHGYRLDGAFGQYVLIVPEVDAVITMTNEASEGPGDKQAILQ AVWDHLLPALADGFQPQPEEIVRTVPTVTGEFDSARSVQGIAPDGSYIVVSPHKESRTWA MSWRCPGTFSHPTDETLDIAVGYEEWQTSHCRVGDDAIDIATSGGWQGETFVARLCVIST PHTLTLRMTPEATTTEWDNEPLNPGGLLGLVHPELRR >gi|302034492|gb|GL383259.1| GENE 114 130638 - 131861 721 407 aa, chain + ## HITS:1 COG:Rv2870c KEGG:ns NR:ns ## COG: Rv2870c COG0743 # Protein_GI_number: 15610007 # Func_class: I Lipid transport and metabolism # Function: 1-deoxy-D-xylulose 5-phosphate reductoisomerase # Organism: Mycobacterium tuberculosis H37Rv # 3 397 37 405 436 333 54.0 3e-91 MKKVIILGSTGSIGTQTLEVISSRRDQFEVAGISAGGSDVGSLAQQIIDFSIPVVAVARE DAAEELQRALAVQAGSRGRIVPNPRILTGPDASTELAAMPADVVCNAITGAAGLRPTLAT LAAGTTLALANKESLVIGGRLVTQAAASGQIVPVDSEHSAFAQCLRGGGRNEVRRLVLTA SGGPFRGRDRASLADVSAAEAMKHPTWNMGRVITINSSTLVNKGLELLEAALLYDVDLDD ITVVVHPQSIVHSMVEFWDGATIAQASPPDMRLPIALGLSWPDRLPDAAAGCDWSTATQW TFEPLDNDTFGAVELARRAGHAAGTAPAVFNAANESCVDAFCAGSIGFLDITDTIAAVLD EHLSGDENDTLGARHVGDEALTLDAVLAADAWGRRRAAEVCARGIRR >gi|302034492|gb|GL383259.1| GENE 115 131876 - 133138 646 420 aa, chain + ## HITS:1 COG:Cgl1968 KEGG:ns NR:ns ## COG: Cgl1968 COG0750 # Protein_GI_number: 19553218 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted membrane-associated Zn-dependent proteases 1 # Organism: Corynebacterium glutamicum # 1 420 5 403 404 219 35.0 1e-56 MLAGIVFFGLIILSVLLHECGHFIPAKIFGVKVTEFFAGFGPKIWSFTRGETEYGFKWIP LGGYVRLIGMYPAKVHHRHSNRLTRFADEARVAEVEGITDADQGRLFSDKPVWQRLIIMS GGILTNLLLAFLLFWAVFGIHGRADQTTTVAAVIPCAHSAQTSGPCSKEDRRAPAAEAGV RAGDRIVSFNGRQVDSWSQLQEFIRGNGGGEVRLGVERDGAFVSLTPTHTLLTKVPDLST PGRTVEAGYLGVSPTMVIVHSGPGDTVSQMWTMSKQSLSALARLPVLTWNVASDLVTGQA RDANSPMSIVGASRVAGDVAGDSQLTLGDKIATGASLLGGLNLFLFWFNVVPLPPMDGGH IAGAIYEAGKRGLFKLARKPDPGPADTAMMLPVAWTIGALMLMMGLVLVVADVVSPVKIF >gi|302034492|gb|GL383259.1| GENE 116 133441 - 133941 155 166 aa, chain + ## HITS:1 COG:Cgl2538_1 KEGG:ns NR:ns ## COG: Cgl2538_1 COG2374 # Protein_GI_number: 19553788 # Func_class: R General function prediction only # Function: Predicted extracellular nuclease # Organism: Corynebacterium glutamicum # 1 91 712 801 816 69 39.0 3e-12 MLGDFNAYAMEDPIRARKAAGFSEVVEEYDPDAASCEFSGRVGSLDHIFANAKAHELVSG AGIWDTNGSESVAMQYSRRDDIVADLHHQPVRCIGTLASPGGLLYADSGPQPSIDGVLDS GGDLGSRFGRPEHGCRGPDFRTRVRISATPATYRSLIRLLLASLPG >gi|302034492|gb|GL383259.1| GENE 117 134055 - 134774 531 239 aa, chain + ## HITS:1 COG:SP0716 KEGG:ns NR:ns ## COG: SP0716 COG0819 # Protein_GI_number: 15900613 # Func_class: K Transcription # Function: Putative transcription activator # Organism: Streptococcus pneumoniae TIGR4 # 12 231 1 217 222 180 44.0 2e-45 MNAFTPSLPAPLTTAGIAVAPSGRVAALSAGRSEAWTAAINHRFVNELFSGELDDAQLSY YIIQDNQFFVPFLELLGEALVRADTVEAKLVFGRQLGMICSEESGWFEATFDELGVSQAD RAHPHLSEPTRSFENLMHKAVNTHHYPTVLVLLVVAEGLYLDWASRTDAPEPGANLPNKF LGWVDLHRGDEFRTWVQFLVDELERASGQVDLEELTRFWNVAVDLELAFFNDVPFPLEG >gi|302034492|gb|GL383259.1| GENE 118 134961 - 136103 874 380 aa, chain + ## HITS:1 COG:MT2936 KEGG:ns NR:ns ## COG: MT2936 COG0821 # Protein_GI_number: 15842410 # Func_class: I Lipid transport and metabolism # Function: Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis # Organism: Mycobacterium tuberculosis CDC1551 # 1 369 1 369 387 537 74.0 1e-152 MTVNLGMPTPPVPTLAPRRKTHQIKVGDVLVGGDAPISVQSMTTTKTHDVGATLQQIAAL TAAGCDIVRVACPTDKDAEVLPIIAKRSQIPVIADIHFQPKYVFQAIEAGCGAVRVNPGN IRKFDDQIESICQAATEHGTSIRIGVNAGSLDKRLLDKYGAPTAEAMVESALWEASLFEQ YGFRDFKISVKHHDPVVMIRAYEQLAAKCDYPLHLGVTEAGPAFQGTIKSAVAFGHLLAE GIGDTIRVSLSADPVEEVKVGIKILESLNLRPRGLEIVSCPSCGRCQVDVLTLANDVTDA LEGIDAPLRVAVMGCVVNGLGEGREADLGVAAGNGKGKIFKHGEVIRTVPEGEIVQFLVQ EANRMADEMDTTGAVEVTVS >gi|302034492|gb|GL383259.1| GENE 119 136105 - 136950 342 281 aa, chain + ## HITS:1 COG:MT2935 KEGG:ns NR:ns ## COG: MT2935 COG3393 # Protein_GI_number: 15842409 # Func_class: R General function prediction only # Function: Predicted acetyltransferase # Organism: Mycobacterium tuberculosis CDC1551 # 12 280 20 282 284 120 34.0 3e-27 MRTRVRQLDDADLSQTIEFLSRAPVANVFLLSRIRQGGLDSARLGCPVHGVFRGGELVGL VHIGANLVPVIDDGRDSAVVDALASKIGRWRRSSSIMGADVAVLPLYERLAQIGPDTWGR PREVRSCQPLLAMSDRPRVVPDARVVRINERHFEPYFRAAVAMYTEEVGVSPLDPGDGYR RHMLELVRQGRGLGIVDDGDVRWKSDVAVTWGNVCQIQGVWMDPAWRGRGLAAPAMAAVV ELARRDHDTVSLYVNDFNTRALRTYRRVGFERIGTMATLLY >gi|302034492|gb|GL383259.1| GENE 120 136944 - 137882 732 312 aa, chain - ## HITS:1 COG:lin1962 KEGG:ns NR:ns ## COG: lin1962 COG1108 # Protein_GI_number: 16801028 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Listeria innocua # 18 277 12 271 280 166 40.0 4e-41 MLSPLDFLSDLTNPLLSFLPKALLVALVCSVVAGVIGSHVVLRGMAFIGDAVAHSVFPGL AVAFLMQGSLLLGGSIAGLTTAILVAVVSQNRRLKEDSVIGILFVGAFALGIVIISRAPG YSGSLQQFLFGSITGITDDDIVMVCVAGALVLALEWAVHKELVTVGLDRETARASDLPVF ALDLLLYVLVTMTVVISVQVIGNVLVLALLVTPAATARLLTDRLGQMMVLAPVIGGFSAL VGLYLSWSIDLPAGGTIVLVATAVFLACWLVAPRGLLALRLDCTAPHHRHARVADDTHRA HLEVGLHVTDPQ >gi|302034492|gb|GL383259.1| GENE 121 137961 - 138653 298 230 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 9 221 7 225 318 119 33 1e-25 MNDLGSIKITDVAVNVGGLQVLHDVNISASKGDLLALLGPNGAGKTTILRTMLGLVKPAK GTVKVAGASPGKGWRHIGYVPQRHEFAWDFPISVAGVVMSGRTRHIGWLRRPCKDDHIAV RDALRTAGMAELANRTVGELSGGQRQRVLIARALATRPSVLLLDEPFTGVDMPTQEQLTE LFIELSGAGTTLVMTTHDLAQAMATADRVCLVNRTVIADSTPQQLRDPAM >gi|302034492|gb|GL383259.1| GENE 122 138650 - 139660 686 336 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4569 NR:ns ## KEGG: HMPREF0675_4569 # Name: not_defined # Def: actinobacterial surface-anchored protein domain protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 336 5 340 340 578 100.0 1e-164 MINRPLAALSAMFIALATGATLSQPAQASPTIPPDPALKQTISDNEKVAKGPAEIKRGHV DIGPRIVDGKFSLMARDDSANPPVWRNTDDTVLRVADASRIDVPNDDTYSFLGDMRGEKA YVIPQTQDQKVVWLGWNTQAPEIVKNFPRGADLVFTGHEGPGQAHMFIETGFDSPMPLYN STKPGEQLVHMEANTHVHANWVFSDPGAQTISVDARGTDDTGVKHSYSTKLRFAVGDKGP ANEARAVGPSPSVAASSSSTAAATNVSAPATTENSFDDSGAGTLWGPGIMAGALIIGIII AALVGRSRSKTLRDEVWNEEHTGASEAHKDVGNESR >gi|302034492|gb|GL383259.1| GENE 123 139681 - 141204 1047 507 aa, chain - ## HITS:1 COG:BH0516 KEGG:ns NR:ns ## COG: BH0516 COG0803 # Protein_GI_number: 15613079 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Bacillus halodurans # 337 506 127 298 300 103 31.0 8e-22 MKKRLLCLVAALSLLAGFGHAPTSRDKLSIVTTTPILADLTRQVAGDRATVTSMVPSGAD PHTYEPSLRDVRTVVYSRVALSNYLMLEPHSVIKTIDSSLPTGSINVSLAEEAQKYGAQV IPLVENANLDTVWLGLRVIGKGARRGSDRSSSVHLQLTSVEGPGDLTAYITGTFGRPQIY YSTADGVDERDDVELPTDAHTHMSWAFSKPGVYKAVFAATLSTPQGNASFGAQTLTIAVG ADPRTIPELADRTVVDQGHADLSADIDEGTMTILSDPTGGGVRTQKRLDPDKTVVWVPPK ALTEIPPSPAFRFLGHPGSPIHQLPQAVLGAHVHGEIDPHLWMSIKNTKAYVQVIRDSLI KADPHEAQTYRENAKRYLTRLEETSHYVDRKIASIPRGRRQLITSHDAYGYLAQAHGMHI AGFVTANPGVEPSMAQRRKLNQTIADLKVPAVFLEPNVLRGSSVLAAIAAENSVTVCPIY GDTFDDHVTNYIDLMRFDADSLAKCLG >gi|302034492|gb|GL383259.1| GENE 124 141201 - 143843 1643 880 aa, chain - ## HITS:1 COG:no KEGG:PPA1500 NR:ns ## KEGG: PPA1500 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 880 1 880 880 1592 99.0 0 MEATVKRFASLLAALLTFLMINPSSANAAAPDQELLHNGHVDAALTEGDQATDRPTTQVL GDSNDLNDRYSTDISPSPDADDSTVLDHGHADIFRVGSAPDGGIDLKLKEDVTGDGALHA PENVLLKIKDSALTDIPATLPGAPQGYVLPLTQNQDLLWPGWETFDVKRNGFDSVKITVS NVKGPGKVHLFSQGSFGAVQPLLDGNATELPGTITVAQPSHVHANWVFGKTGVYTMTVQA TAHRSGKKFQTTPHTYTWVVGDTTPLPEPWGKLTPPPTPTPSPTPSITPPKTSVAPKPTP ARPQKRSQPREQTRKPVLKPKANKTPCTQRLVLDHGHSDVFRVGSAAKNGLDLKVEEDVT GEGVLHAPESVLLAVKDSALTTIPRGYPGAPKGYLLPMTQNQNLLWPGWETFDVKRNGFS DVKINVRNVKGPGKVHLFSQSSFGNVQTLLDRGSHTMPGTITVEQPSHVHANWVFTQPGL YQMTVDATAVRNGTTVSTGAHTYTWAVGSMAIAANSCSTDRVAGSPARSNTGTPAPEKDS NRGSSDKPFDDLGVIHNTLENDSASSNGSTRVTRSGSSIKKEICHPVKIPNKAAAVKKTV ARSAGQSAAIATEGHFDWGVQLQPGKLISALKDDRSAPATWVDPSSIVMAVGDKANTTAP AGMEFIAKGGTKVWLIGATQVPGVPWLGVNTMHESIINGTTGPVHMHLDKVSGPGKMAVF MSGTFGGGVGQRAFDNVGGPTGYTVPANTHAHPNWVFTAPGHYTVTVTQSATTKSGKKLS ATGTLHFAVGINASPVAASLGKLSASPKTDQNADPGYTIVGRTPDGKPCDLKAAGLPGSG ENGEFGDTGIVSHTNQGLVSGTFVVLGVAGALLLARRRRG >gi|302034492|gb|GL383259.1| GENE 125 144013 - 145770 1417 585 aa, chain + ## HITS:1 COG:Rv2845c KEGG:ns NR:ns ## COG: Rv2845c COG0442 # Protein_GI_number: 15609982 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Prolyl-tRNA synthetase # Organism: Mycobacterium tuberculosis H37Rv # 1 570 1 566 582 684 64.0 0 MLTRMSQLFVRTLREDPADAEVPSHRWLVRAGYIRRVAPGVYSWLPLGLRVMRRIEAICR EEMASIGAQEVSFPALLASDPYKETGRWVEYGDNLFRLKDRKGVDMLLGPTHEEMFTLMV KDLYSSYKDLPLCLYQIQNKYRDEARPRAGILRGREFVMMDAYSFDVAQEGLDEAYQAQR DAYIRIFNRLGFDYAIVKAMSGPMGGSRSEEFLAVAANGEDTFVRSSGGYAANVEAVRMA VPDPLPIDGLPEAEVVDTPDARTIESLVRIANEVRPRADRPWTGADTLKNVVFMVAHPDG TREPLAIGLPGDRDVDEKRLEAVLEPAVVEPFTEEDFAANPQLVKGYIGPGALGEDNSSK VRYLVDPRVVTGTSWITGADQKDRHVFNLVAGRDFTPDGVIDVAEIREGDPAPDGSGELH LARGIEIGHIFQLGKKYADALGLKVLDHNGKLVTVTMGSYGLGVSRAVAAIAEGTCDEKG LCWPREVAPYDVQVLATGKGTEILDEATRIASELAEAGLEVLLDDRKASPGVKFADSEIL GMPTSVVVGRGLKDGLVEVRDRSTGENRQVSVAEAVCAVLKEVRG >gi|302034492|gb|GL383259.1| GENE 126 145931 - 147682 1035 583 aa, chain + ## HITS:1 COG:no KEGG:PPA1498 NR:ns ## KEGG: PPA1498 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 583 2 584 584 1154 100.0 0 MPENEDELTRSVDKAARNTLGRRTFLGGVTLVAAAAVTGTTPALAHASKRLHSTSGTTLE QVGLLDPGSGYRRIKAQRGYPLVVREELARGKSGRDDRRDGLASFVQVTDLHVTDVQSPM RVEFLHPLAGPAFRPQEALGPLATASLVRRVNSLQGGPATGRAFDALVSTGDNTDNHEHV ELDWYLTLLAGGTIVPNTGARDRWESVQTFGNPLFYNPESHSSDIYKRAGFPQVDGYFRR VMAPVTSSGVKIPWYAVFGNHDDSIQGTLPSDWGLLKTMYTSDRKITGFASDNDTKAYLQ AAQGNGPVALSNDTVSLTRQITADERRVPFTPFEFIKAHLRDGVNGSGPHGHGFSEDDLN AVRGYYTFSIANGVTGISLDSTNRAGYTDGSIDDRQWKWLKSVLRAGSSVYYDDLGVRHH HDVSDTMFVLFSHHDSMTMNNPVLPGDGTGIRHLGPELVSLLSHYPNVLAWVNGHVHANN ITAHHHALDARRSWWEINTASHVDFPQMARIIELADNHDGTVSIFTTLIESNAPYQADYD TTDPDGLASLYREFGANDIHTRMGRLGTSVDHNTELLLAHPWA >gi|302034492|gb|GL383259.1| GENE 127 147768 - 148535 594 255 aa, chain + ## HITS:1 COG:RSc3337 KEGG:ns NR:ns ## COG: RSc3337 COG0730 # Protein_GI_number: 17548054 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Ralstonia solanacearum # 6 246 3 244 252 135 39.0 8e-32 MTSWVFAGLVLAAFMAGWVNAVVGGGGLIMLPSLLVGLPTETPVATIVGTNKVAQVVGNL TAGVGYLRKQRPDWRMFLWTAVLAGLGAVLGARIVTYMSRAVYTPILLVVLVIIGIYTWR RPSLGAGHNGEGGKHPILVPIIGLFLGCYDGAIGPGVGTFWVLTYVAVGGYSFLKASGMA KICNAVTNLVTITTLAIHGHVWWHIAWPLVISNVLGGLIGARAAMKHGNGFVRTMFLIVT SVLAVRMLVQLIWRV >gi|302034492|gb|GL383259.1| GENE 128 148566 - 149528 588 320 aa, chain - ## HITS:1 COG:no KEGG:PPA1496 NR:ns ## KEGG: PPA1496 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 320 1 320 320 526 100.0 1e-148 MIARRTILASGAAFVTIGLTGCGHNSPEKKATEKKTTPVRATTTASAPHRSDAVSTEALL ADLATKAARSVTDGQLTVLNQVAAAHRRHLEVLSQSNPFSGSTATPSAAISPTPRTAGQG SPLALLQHHEKAAATQYLEICQTAQDSSETLLWASLSVFCSAFNPSAPAPQPTPKVVPVT IGQEPLTNAQQALLTHLNALVAGLEWGIGRLGENDPLRTWGWDRREQVLAQRAEVRQSIR DASTTPTPDVPGYPMSPAPVNDAATRSLWSGLEANVLSGWGRVTAASGSAARPHAVASMV SQTQVLAHLGTGVTTWPGWV >gi|302034492|gb|GL383259.1| GENE 129 149657 - 150193 639 178 aa, chain + ## HITS:1 COG:Cgl1942 KEGG:ns NR:ns ## COG: Cgl1942 COG0779 # Protein_GI_number: 19553192 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 4 168 7 160 178 63 31.0 1e-10 MNAERLTRLLEPVVSQVGLELDRVDVVPAGRRRLVRVTIDGDGPDGHGPSLDEISEATAE ISHCLDDSGAMGESPYTLEVSSRGVSTPLTQPRHYRRNIGHLVRFTLNPAEEQKSGETFD GRIAEAGEEVVTLEVEAENSKPHKPVYTTREVQLADVAKAVVQVELNRRDAQASKEEN >gi|302034492|gb|GL383259.1| GENE 130 150195 - 151166 616 323 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|17988250|ref|NP_540884.1| transcription elongation factor NusA [Brucella melitensis 16M] # 11 322 17 347 537 241 40 2e-62 MDIDLSTLRMIERDKDIPLDYLLTTLEDALLNAYDKTEAPVNGAKVQLDRKTGNVAVMLP EKDEEGQVVGWYDGTPEDFGRVAASTARQVIFQRLREAEDEQKYGHFSAVEGDVITGVVQ QSYRDTRTVRVDLGSLEGIMPPAEQVPGEKYSHGRRIRVYVVAVRKEARGPQVIVSRTHP NLVRKLFAMEVPEIEQGVVEIKALAREAGHRSKIAVVSHNPDVSAKGACIGPMGQRVRAV MHELDEEKIDIIDWSEDPAEFVGAALSPSKVSSVTVIDPKAKTARAIVPDYQLSLAIGRE GQNARLAARLTGWRIDIRPDNKV >gi|302034492|gb|GL383259.1| GENE 131 151246 - 151494 435 82 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|213961178|ref|ZP_03389457.1| LSU ribosomal protein L7AE [Propionibacterium acnes SK137] # 1 82 1 82 82 172 98 2e-41 MTTRPQRTCVGCRHVDDPANMARYVLVDGVVVADPTGHAQGRGAHVHVDDECWKRAVSGG FARSFRARVVVRSACQERLSAR >gi|302034492|gb|GL383259.1| GENE 132 151715 - 154609 2297 964 aa, chain + ## HITS:1 COG:MT2905 KEGG:ns NR:ns ## COG: MT2905 COG0532 # Protein_GI_number: 15842380 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation initiation factor 2 (IF-2; GTPase) # Organism: Mycobacterium tuberculosis CDC1551 # 2 963 4 899 900 837 56.0 0 MAKVRVYELAKELGLSSKQLLGKLNDMGEFVRSASSTIEAPVVRRLRDQIGSAEPADDAK AAKPAARKSQTSSKKTSKETTTAKPAPGPKPGPGPKPTPGPRPGSSSGPKPGRSSAARTS ATPRPGLIKSSGASSQQEPPAAKPESKPTPKPGQNVPKPHAPAPKPKPGAPSKSPKPGAR PGPRPGGSAGLPSAARPGPRPGAGRRTGAPRPGNNPFASSQGMGQSRHRSEGGQRSGGSR SGQGERMPRPGGSQGSRGGSGMPRPNPAMMPKHQSSQIGQATTGRGGRGGGRGRGGSRGS GFGGGFGGGPRGPIGGGRGGRGGRGTQGAFGRGGGGRRGRKSRKQRRQEFDEMQAPLVGG VRVRKGNGETVRLRRGASLTDLAEKINAEPAQLVQVLFNLGEMVTATQSVSDDTLEILGG ELNYQIQVVSPEDEDRELLESFDLEFGEDEGDDSDLVARPPVVTVMGHVDHGKTKLLDAL RHTDVVKGEAGGITQAIGAYQVQTEVDDAERAITFIDTPGHEAFTAMRARGAQSTDIAVL VVAADDGVMPQTVEALNHAKAADVPIVVAVNKIDKPEADPDKVRGQLTEYGLVPEEYGGD TMFVNVSARTHEGLDDLLEAIVLTADAALDLRANPDMAAQGVAIEAHLDKGRGPVATALI QRGTLHIGDSIVAGSSYGRVRAMINDQGESVDEAAPATPVQVLGLTSVPGAGDNFLVVDD DRKARQIAEKREARMRAAQQARSSRRKTLDQLFEQLEKGETEELLLILKGDGAGSVEALE DALAKIDVGDEVDLRVIDRGVGAITETNVSLAAASNAVIVGFNVRPTAHAQRMADEENVD IRYYSVIYDAIDEIEAALRGMLKPIYEEKAMGTAEIRQIFRSSKVGTIAGCMITDGTIRR HAKARLVRDGVVVQETEINTLQREKDAVTEVREGYECGLTLTNYSDIHVGDEVQCYEMVE KPRD >gi|302034492|gb|GL383259.1| GENE 133 154778 - 155299 176 173 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|332675921|gb|AEE72737.1| ## NR: gi|332675921|gb|AEE72737.1| hypothetical protein PAZ_c15790 [Propionibacterium acnes 266] # 1 173 1 173 173 322 99.0 7e-87 MYKKSRIVVMFAFAESVFGLCSAAPGLADTIRATPVTSWKSLSVTGGSAKASGKTQGHKK AYMSSDGVWHSQANYIFTVAGHKKTDRGGYGKIDASVFYYTCQPMPGGNCIPKVLRTGAS GSTGRLVGGKAYRWDADAKIRVGRNQRGGWQRSSKICIDLVARRDKCSDGLNW >gi|302034492|gb|GL383259.1| GENE 134 155238 - 155537 125 99 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MWARYPEPSRRLLTGCPSRRSVPALGRLIPVSTASIVVLPAPLGPTRALTPTGKVADTGP SCQPDRYRTTTSSSSIVSELTNSTHRCTYHVEPLGRYKS >gi|302034492|gb|GL383259.1| GENE 135 155389 - 156078 253 229 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 3 193 42 231 318 102 31 2e-20 MSALVGPNGAGKTTMLAVLTGIKRPRAGTLRRDGQPVRRRREGSGYRAHIGYVPQECTWS PSWPVEDFLAFCARMYRVPSTQVRHRCQGVMSDLNVGQFAHQPIGTLSGGQKRRVFLAAA LVHDPEVLILDEPTVGLDPGERISFRRHVVEQAASRVVVLSTHLMDDVALSADQVHLVDG GHITWSGTLPELMAAAGESDSQDHVSVAEQGYLHLMQGRAESELLEGDR >gi|302034492|gb|GL383259.1| GENE 136 156075 - 157247 590 390 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4556 NR:ns ## KEGG: HMPREF0675_4556 # Name: not_defined # Def: putative type IV conjugative transfer system protein TraL # Organism: P.acnes_SK137 # Pathway: not_defined # 1 390 1 390 390 617 100.0 1e-175 MKACLRQAVWSGLGLAVLWVATSVGLMHMYPRVWKSFALTTGSVSVDTVILSPVCCGVGV AYGARLRRAGVTRTSRAWPRSATAAIVTTWLMGVGAVLLLAVGVTTAILALVASGDADPR LVMGSVLTAMAATAFLALGAVLGVAAGSYLLAAVAAIAVYLVAGAVPEAYDLLIGWSGPA AIDGAPSHLTWHAIALWAGLDCAAIVVSLVLVAVITTPGGGPWWRWLTATILVAAVIVDA AATIRLEEVWESTDDWRCREVGKHGSMACVSGDLSWRLEEYATAMGRVDDLLMASGVQRR IVYAPEGGPGKAGYLPVRTHVSTSSTAREWAGDLNAPLLGDNLLGVEDSTSSQCDGTVEI LDDALVSVMDGQPLAPDSLRSMVAQVRACP >gi|302034492|gb|GL383259.1| GENE 137 157244 - 157855 429 203 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4555 NR:ns ## KEGG: HMPREF0675_4555 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 203 1 203 203 335 100.0 7e-91 MTGRLSCFGWFLRSRGLVAVVAYLTVGMVCAHHLGGDLVTVPFAGSRSVDVGLGPSSLSG ILASVLFSSPDPQREQAFPDRPIRTMRVVWAVIVLVWPVAWAVLFNGDQPISQWWVLWFA RNHVLLVGLAMVASVVLSVAWAWLPGTIFVLSCWILGTKDSAATPYWWALLNQSPLAPLS LAVSAALVVVGMVLQWSTPGPPR >gi|302034492|gb|GL383259.1| GENE 138 157936 - 158367 521 143 aa, chain + ## HITS:1 COG:Cgl1938 KEGG:ns NR:ns ## COG: Cgl1938 COG0858 # Protein_GI_number: 19553188 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-binding factor A # Organism: Corynebacterium glutamicum # 5 143 4 146 149 101 44.0 4e-22 MNTPNPRVAKLADQIRVVVAETLERRVKDPRLGFVTITDVRLTGDSRDATLFWTAMGTDK EIAGTEAALESAKGMLRSTVGKRLKLRYAPTLTFVRDATPETAKSIEDALARAAASDAEI ARRSQGAMPAGEADPYRHSDEEE >gi|302034492|gb|GL383259.1| GENE 139 158431 - 159804 1059 457 aa, chain - ## HITS:1 COG:BH1862 KEGG:ns NR:ns ## COG: BH1862 COG0371 # Protein_GI_number: 15614425 # Func_class: C Energy production and conversion # Function: Glycerol dehydrogenase and related enzymes # Organism: Bacillus halodurans # 15 310 25 308 399 159 33.0 1e-38 MSDEIIAAAVAGAGDTDVVEMGRGVLDRAGNVLAEHMCRARGHNLPALVVADERTWAVAG KAVDAGLRSAGVVACDPLVFPAEPCLYASLDNAHTIADRLRTLDAETGSAVVPIAVGSGT INDLTKLAAKDVGRRYAVVGTAASMDGYTGAGAPISDNGVKVTMQCVAPQVVIFDLDITA AAPQVMTASGYGDLAAKIPGGADWIIADAAGIEPLDQHVWALVQSGVRDALSRPDDLRRG DPEAFSGLVEGLILSGLAMQVYDGTRPASGAEHYFSHIWELAHVGADRNPPLSHGHKVAI GTLAMLAFYEKFLDRDLSRLDIDAAVAAWPDWRTVESDIRSTFEGALADHAVKETKVKYV DADGLRARLNRVVDRWHETRAALEKQLVRARVFADQLRRAGAPSRPEDIGLTAADVRATF PKAMYYRSRYTVLDLAREAGWYEELVEEVFAPDGLWT >gi|302034492|gb|GL383259.1| GENE 140 159807 - 160106 94 99 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4552 NR:ns ## KEGG: HMPREF0675_4552 # Name: not_defined # Def: phosphocarrier, HPr family # Organism: P.acnes_SK137 # Pathway: Phosphotransferase system (PTS) [PATH:pak02060] # 1 99 1 99 99 157 100.0 9e-38 MIRTEVTIGHPAGIHARVAAHAVLLASGHSASVFLRSSRGTASLTRLADLLRLDVREDAV VEILADGPDEVEALHEVATFLTSSTNDPAPHTASDEGND >gi|302034492|gb|GL383259.1| GENE 141 160103 - 160471 337 122 aa, chain - ## HITS:1 COG:ECs3560 KEGG:ns NR:ns ## COG: ECs3560 COG3731 # Protein_GI_number: 15832814 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system sorbitol-specific component IIA # Organism: Escherichia coli O157:H7 # 1 121 1 120 123 90 40.0 8e-19 MSVIYRNQICAVGSQAESFLSEKMLVTFGGKAPDELRDFCYALPEATSSGTIGVGDVLAI GEHRFPITAIGALAQRNLDSLGHVTLVFDGADEPRLEGALHVRCGGELPRPQAGSTILIE SA >gi|302034492|gb|GL383259.1| GENE 142 160499 - 161548 1115 349 aa, chain - ## HITS:1 COG:BH0772 KEGG:ns NR:ns ## COG: BH0772 COG3732 # Protein_GI_number: 15613335 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system sorbitol-specific component IIBC # Organism: Bacillus halodurans # 4 347 3 334 335 304 49.0 2e-82 MTEYRSVTVSHGSGGYGGPLTITPTEAKHKLVYIVGGGVRPPVVDRIAELSGAEPVNGFN TSIPDEEMMAVIIDCGGTLRCGIYPRKGIPTINVMPTGKSGPLAQYINESIYVSAVDVDQ VRLADSPTSSATVTSPAIAAAAAPRSKAGTAGTVQGEWSTDKKISEVVAEKKDKTVMDKI GLGAGKVISVFYQAARDAVQAMLTTIIPFMGFVAMLIGIINASGFGTWFTKLLIPLAGNG IGLIVLGLICSLPFLSPLLGPGAVIGQIIGTLIGVEIGKHNIHPSLALPALFAINTQNAC DFIPVGLGLAEAAPETVEVGVPSVLYSRFLNGVPRVAIAWLCSIGLYAS >gi|302034492|gb|GL383259.1| GENE 143 161550 - 162128 466 192 aa, chain - ## HITS:1 COG:PM1971 KEGG:ns NR:ns ## COG: PM1971 COG3730 # Protein_GI_number: 15603836 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system sorbitol-specific component IIC # Organism: Pasteurella multocida # 1 175 2 176 184 224 58.0 6e-59 MHYLVKAAEWFVGLFQEGAKTFVSWMGSIVPLVLMLLIAMNSLIRLIGEDRINRLAQKAG NNPVSRYLLLPFIGSFMLCNPMVHSLGRFLPERYKPSYFASAAQFCHTSNGIFPHINPAE LFIWLGIAQGITKAGLPTGPLAIRYLLVGLVLNFVGGWVTDLTTRYVSRQQKVILPDTMD GKIVHVDTLVEA >gi|302034492|gb|GL383259.1| GENE 144 162212 - 162715 408 167 aa, chain - ## HITS:1 COG:no KEGG:PPA1483 NR:ns ## KEGG: PPA1483 # Name: not_defined # Def: sorbitol operon activator # Organism: P.acnes # Pathway: not_defined # 1 167 2 168 168 300 100.0 2e-80 MFWPVLATVAIIYVCNATLAMRQMRNFSTTYTLLRKRGKVAIGKQKNALSRGAIVMFLLD DRDRVVAGRRMNGITVLARFRDFPVFDGLPLEEIDPAYVRTDRGTRRAIANARDNFLTAR AGEIPVEPPTPLMKVINRVDAKVGHTRERPAADTRHVVRRRGLTAVD >gi|302034492|gb|GL383259.1| GENE 145 162715 - 164637 1268 640 aa, chain - ## HITS:1 COG:BS_licR_1 KEGG:ns NR:ns ## COG: BS_licR_1 COG3711 # Protein_GI_number: 16080911 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Bacillus subtilis # 7 436 12 460 499 102 24.0 2e-21 MDREMWILRQLETSLTASAEALAERLQVSPRTITNAINTLNRMLAPAASVRPTGGRYRLY ILDPQEYSQIRSRLVRATDSLNDPRHRRAQEFGVLLSAKHPVTSDDLADIVCTSRTTVLA DIARLREALKPLGVRIEGRSNQGFSLAAEELDLRLAELTLYPAELVDEYPIDDDIVAVVS RITGQAHLSKPSRHYVRRWLTVLLDRTLTGHPLDAMSEEYQRLRNTPAHRIASKLLTEAE DLVSTTFPIEEELFLAMSVAGMRTPDSAQGRQLFPADEEVPGLVDAIFERIAEIMQIHLD ADELADEFAHHLTFMLNRIRFRVTIDEESVRSIRYQYPVAHRMAEISRDVIEERTGMRIS DSETGLLTGYHQVFLDSHRACPYLRLAIVTATGRVSAHLMRIQLDKVLPHGTKYLMLTGD EADESTLARTDLVVATPDVDITTLAVGDVPVIQLGQVFDPAELISRMSRLNLRGHVDLQL TGANSSLLMSMLSPDRFMAMPAGTDYWSATEALVAYLIDQGLVDESFLATLRARENEATM LLDGLVGFPHATIPGAERIVLAMATIPRRPEQPGARVVFLMGVPDKADYDDTILVTVYDE IIRLTNDPDLLNRLSQLTSYEDVFWLMASRPCNPVCPEER >gi|302034492|gb|GL383259.1| GENE 146 164380 - 165018 181 212 aa, chain + ## HITS:1 COG:no KEGG:PPA1481 NR:ns ## KEGG: PPA1481 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 126 212 1 87 87 165 98.0 1e-39 MTWVVEGVRGADQTTADLAVFLWVENVEAVTAAGGTYGRRRGQHPVERVDGVGDGTGADL QTFCQRFGGGCQRCLQLPEDPHFSVHEITSLCSTSLVGMKLTPHLRPGLAALCVLLSDFW KGGGAMSRSIRLRYTLAYRSSGRGGPTTLIPVLILPVRRCSMPVVIDFFEVGWSSRRTIE AVRLSIVIRPRIVHYDARFRLFFLGILITLHL >gi|302034492|gb|GL383259.1| GENE 147 165742 - 166068 347 108 aa, chain + ## HITS:1 COG:MTH1452 KEGG:ns NR:ns ## COG: MTH1452 COG1917 # Protein_GI_number: 15679449 # Func_class: S Function unknown # Function: Uncharacterized conserved protein, contains double-stranded beta-helix domain # Organism: Methanothermobacter thermautotrophicus # 17 106 8 97 99 67 41.0 9e-12 MTETNNLGFIENLAAQIDYSDGSTVSKTVMRAEGVNIVLFSFAAGEELSEHTAAMPVIVE ALEGQLEITAEGRTVTLNPGGIVHFTTRLPHAVRAVEASKMALYMITA >gi|302034492|gb|GL383259.1| GENE 148 166121 - 167008 681 295 aa, chain + ## HITS:1 COG:Cgl1933 KEGG:ns NR:ns ## COG: Cgl1933 COG0130 # Protein_GI_number: 19553183 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridine synthase # Organism: Corynebacterium glutamicum # 5 277 7 278 297 233 49.0 3e-61 MNTLQSGVLVVDKPAGVTSHQVVGRVRRLMGTRKVGHAGTLDPMASGVLVVGVNRATRLL GHLSLHDKDYTATVRLGVGTVTDDAEGDVTVTTDASAIDDRAIHAAMVRQTGEIQQVPAA VSAIKVNGRRAYAKVRAGEDVVLRPRAVTVSRFEAIAIRRHGQVIDVDVEATCSSGTYVR ALARDVGADLGVGGHLTALRRTRVGPFDLTAACVDIFAQDAVTPTPMTMAEAAALSFPVV HVTADQAAAIRVGRRLSFTVPAEVTAIIAETGELLALYRPDDEKDGQSRAICVLV >gi|302034492|gb|GL383259.1| GENE 149 167162 - 167464 91 100 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|314962063|gb|EFT06164.1| ## NR: gi|314962063|gb|EFT06164.1| hypothetical protein HMPREF9614_00186 [Propionibacterium acnes HL002PA2] hypothetical protein HMPREF9618_01166 [Propionibacterium acnes HL082PA1] hypothetical protein HMPREF9595_01933 [Propionibacterium acnes HL005PA2] hypothetical protein HMPREF9569_01292 [Propionibacterium acnes HL078PA1] hypothetical protein HMPREF9615_00488 [Propionibacterium acnes HL002PA3] hypothetical protein HMPREF9579_01205 [Propionibacterium acnes HL087PA1] # 49 100 1 52 52 103 100.0 3e-21 MTAAVPREASSSRDSPALSLSITCRSFLPKTLYRWDARTKSTSYGTFRMDDLEITQATQN ATASRHGDIDHRNGGPTSAQINHLMVSRYIYVCKFEYSYS >gi|302034492|gb|GL383259.1| GENE 150 167340 - 168647 1113 435 aa, chain + ## HITS:1 COG:BS_opuAA KEGG:ns NR:ns ## COG: BS_opuAA COG4175 # Protein_GI_number: 16077367 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport system, ATPase component # Organism: Bacillus subtilis # 4 390 10 394 418 332 47.0 7e-91 MDLVRASHLYKVFGKNERQVIERLKAGESREELASLGTAAVIDVSFEVAKGETFVVMGLS GSGKSTLIRMINGLWSPSEGTVEVAGKVVSDMNDAQLRALRRDHVSMVFQHFALLPHLTV RENAAYGLKLQGKLKQKERLEKANEWLNTVGLNGWGDKYPHQLSGGMQQRVGLARALAAE TDILLMDEAFSALDPLIRREMQDQLLELQGALSKTIIFITHDLNEAMYLGDHIAVMRNGR VAQIGTSDEILTQPADDYVADFVQDVDRSRVLTASAVMRPTEAVVSRSAEPRRVQRILDQ REWAGVFVVDEHRRLLGTVGDQEVIEAARRGDRSIADAVETSGILTARTDTPLSELFAPT SNARVPLAVVDEDFHLMGVISRVTLLDAMSRARDEAGEGSVMSLENTGKLPIIRDTGNPV GLPPADQIATIEKEA >gi|302034492|gb|GL383259.1| GENE 151 168653 - 169519 965 288 aa, chain + ## HITS:1 COG:RSp0067 KEGG:ns NR:ns ## COG: RSp0067 COG4176 # Protein_GI_number: 17548288 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport system, permease component # Organism: Ralstonia solanacearum # 10 272 5 267 298 225 46.0 8e-59 MGFNFANPRIPLGSWIETFFDWFQNAFDWLITFTNVVIGGMYHGLNLVLSKPLYLVMMVV FAAIGWSCANWRVGLFALIGFYLVRSMDQWNNTMQTLALVVVAVILALILAIPLGIWAAK SKRFSAIIKPILDFMQTMPSLAYLVPVIVLFGIGQVPGAIATIIFALPPGVRFTELGIRG VDTETVEAGAAFGASPRHILWRIQMPLAMPTVMAGVNQVIMLALSMVVLSGMVGAGGLGG DVVAALSQVDIGLGMEAGLAVVIVAVYLDRITNGLANRTPLARAQRAS >gi|302034492|gb|GL383259.1| GENE 152 169562 - 170569 1011 335 aa, chain + ## HITS:1 COG:BMEII0550 KEGG:ns NR:ns ## COG: BMEII0550 COG2113 # Protein_GI_number: 17988895 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport systems, periplasmic components # Organism: Brucella melitensis # 64 322 24 279 287 142 37.0 8e-34 MVQRKVIAVASALTVGALALSGCGATNSGNGESGGSDVGSDNVNTKWADCTPGHGSKDTT SMKADGKKDITIGAFNGWDESFATAGIMKNVLEKDGYKVTIKGFDAGPGYAGLVAGDIDL LTDGWLPVTHADYVKRYGDKMENLGCWYDNAKLTIAVNKDSKARTIGDLKTMGDEYDNTL YGIEAGAGLTKATKDSAIPKYGLKNLNFKISSTPAMLAQLKKSTSAGQDIAVTLWRPHWA YGAFPVRDLKDPKKAMGNAEVIYSFGRPGFEQDFPKVAQLVRNMAFDDNKLSDLEDTMFS ADKYGGKNQEKAVEEWISRNNDWVDKLKTGQLAEK >gi|302034492|gb|GL383259.1| GENE 153 170571 - 170777 73 68 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MHTIEVSDDYSRRFLGNRHVEQSMVRIRLNPNPTERASLTQSVKGSDSQETEYRGRQRAA TRAARIDV >gi|302034492|gb|GL383259.1| GENE 154 170721 - 171617 359 298 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 [Bacillus selenitireducens MLS10] # 10 298 20 313 317 142 31 1e-32 MSVPEESSTVVIGNFDGVHRGHQALVQEAKRLDPDGYVVVVTFWPHPLTVVAPDQAPALL CSLERRIEWLKDAGASEVRVVNFTTEIASWAPAAFVERVLGPLQPRHVLVGQNFRFGRHA VGTPDALAEHGCFQVHAMDLVAISGVTVSSTRVREVVAAGKVTEAAELLGRPFEVGGVVV MGDQRGRELGFPTANLVVPQDRAVPADGVYAGWLEPTSGPDAGRRLPSAISVGTNPTFDG VERRVETYVIDRDDLELYGVDITVTFAERLRGQIKFDGIEPLISQMADDVETAKRVLS >gi|302034492|gb|GL383259.1| GENE 155 171857 - 172120 446 87 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50842951|ref|YP_056178.1| 30S ribosomal protein S15 [Propionibacterium acnes KPA171202] # 1 87 1 87 87 176 100 8e-43 MDAAEKKKIIEEYATHPGDTGSPDVQVAILTKRIAELTEHLKVHKGDHHSRRGLMLMVGQ RRRLLNYIAKNDIEHYRELIARLGLRR >gi|302034492|gb|GL383259.1| GENE 156 172126 - 172308 72 60 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|314976668|gb|EFT20763.1| ## NR: gi|314976668|gb|EFT20763.1| hypothetical protein HMPREF9566_01379 [Propionibacterium acnes HL045PA1] hypothetical protein HMPREF9596_00087 [Propionibacterium acnes HL005PA3] hypothetical protein HMPREF9583_02535 [Propionibacterium acnes HL038PA1] hypothetical protein HMPREF9571_02292 [Propionibacterium acnes HL043PA2] NAD(P)H oxidoreductase [Propionibacterium acnes HL099PA1] # 1 60 1 60 60 90 98.0 3e-17 MGRQSTVTVILSVVMSLRHQRPIPRIAAMHAVTIAGSDETRASCEHSERGARRDTPSHMI >gi|302034492|gb|GL383259.1| GENE 157 172441 - 174642 2501 733 aa, chain + ## HITS:1 COG:MT2853 KEGG:ns NR:ns ## COG: MT2853 COG1185 # Protein_GI_number: 15842321 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) # Organism: Mycobacterium tuberculosis CDC1551 # 9 729 13 739 752 928 67.0 0 MEGPGLEFTEAIIDNGKLGKHVVRFEAGLLAQQADGSAAVYLDGDTMLLSATTAAKTPRD SIDFFPLTVDVEERMYAAGRIPGSFFRREGRPSEGAILACRLIDRPLRPSFVKGLRNEVQ VVVTVMALNPAVYYDVVAINAASMSTQLAGLPFSGPIGGVRMALIDDQWVCFPSVDQRKE STFDMVVAGRVLADGDVAIMMVEAESTPATWGLVRGGRTAPTEEVVATGLEAAKPFIKVL CDAQVALAAKLPKETYDFPVFKDYEDDVYAAVEEKAADELSRIEQIAAKLERQEAESELK ARIKAELAETFPEREAEISGAFKAVMKKIVRKRVLDEGVRIDGRGPRDIRSLSAEVGIIP RVHGSALFQRGETQILGVSTLNMLDMEQKLDTLSPENTRRYMHNYNMPPYSTGETGRVGS PKRREIGHGNLAERALIPVLPTREEFPYAIREVSEAIGSNGSTSMGSVCASTLALLNAGV PLRASVAGIAMGLMSETDEDGKTKYLALTDILGAEDALGDMDFKVAGTSEFVTALQLDTK LDGIPADVLAGALKQAKEARTAILEVMNEAIDSPDEMAPTAPRIITVHIPVDKIGEVIGP KGKMINQIQDDTGANISIEDDGTIFIGADNGDSAESARSMINAIANPQMPEVGERYLGTV VKTTSFGAFVSLLPGKDGLLHISKMRDLNDGKRVEAVEDVLSVGQKIQVEIAEVDDRGKL SLVLASDEDDADE >gi|302034492|gb|GL383259.1| GENE 158 174883 - 175623 672 246 aa, chain + ## HITS:1 COG:Cgl1927 KEGG:ns NR:ns ## COG: Cgl1927 COG0289 # Protein_GI_number: 19553177 # Func_class: E Amino acid transport and metabolism # Function: Dihydrodipicolinate reductase # Organism: Corynebacterium glutamicum # 2 245 3 248 248 264 58.0 1e-70 MIKVAVFGAKGRMGTAVCQAVEEAEDTELVAAVDSGGDRSDASGADVIVDFTTPDAVMDN LSWAISHDINTVVGTTGFDDERYQVLRDQLADHPNIGCLVAPNFSIGAVLMMHFAEQAAR FYESAEIVELHHPNKVDAPSGTARTTATKIAAARQEAGLGEVPDATKSQLNGARGAVVEG VHVHSVRLRGLVAHQEVLFGAEGETLTIRHDSMDRVSFMSGVLTGVRGVLDRPGLTVGIE GLLGLE >gi|302034492|gb|GL383259.1| GENE 159 175640 - 176455 396 271 aa, chain + ## HITS:1 COG:no KEGG:PPA1469 NR:ns ## KEGG: PPA1469 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 271 9 279 279 473 100.0 1e-132 MTPSEPTQVLPPRPRTGSDTVVTVDRDRRRHRFIKWLIAIVVVALLAIAAMIVDQTFRAR AEKDIATTIATSVGADASTIGVTIHNRPFLKALVTDELQGLDATIPKATVARDDTTVTFH DVDVHANGIRHVREKSQTVAETMSASGRVDWSELSRLAGAKITYNDDAGETGRVTIVREM SVLGARVDVSITAVPGVEATSRRVTLSSPSASLDDIPIPDVLLKPILKGITSRFTLPNLG NLHYESLKATPQGLDFSLVGTEVKLSDLTGR >gi|302034492|gb|GL383259.1| GENE 160 176563 - 178302 1418 579 aa, chain + ## HITS:1 COG:Cgl2559 KEGG:ns NR:ns ## COG: Cgl2559 COG0028 # Protein_GI_number: 19553809 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Corynebacterium glutamicum # 4 577 6 577 579 594 54.0 1e-169 MNVAEQLVQQLLDAGVRRIYGIVGDSLNPVVDAVRKTGGSVKGGIDWVHVRHEEAAAFAA AAEATLTGELAVCAGSCGPGNLHLINGLFDAYRSQVPVLAIASHVPSVQIGMSYFQETHP DRLFVECSDYCELVSTPEQAPRVMNSAIRHAVAGSTVSVITLPGDISDKKAAAPSPVFIP SRRPTIEPNPEDVRQLVKLLNDVRKVAIFAGAGVEGAHDEVLALADKLKAPIGHSLRGKD FIQYDNPFDVGMTGLLGYGAAAEGMNDADVLILLGTDFPYNQFLPDTLTVQVENRPEKLG RRTDVSFPIHADVKALCDAVTPLLKQHDDKFLKAAVKRHAKIMKAPVGSYTRNVEHMKPI HPEYVAHVLNEVADRDAIFTADTGMCNVWTARYIDPLGTRRLIGSFLHGSMANALPHAIG AQASHPGRQVISVSGDGGLSMLLGELVTARMLNLPIKVVAFNNSTLGMVKLEMLVNGLPD FGTDVHDVDYAGLAKAIGFHAERVDDPRNIRRALTDAMDFDGPALVEVITDPNALSLPPE IKGEQMIGFATAMSKIVLNRGAGEAVSMATSNMRNIPRF >gi|302034492|gb|GL383259.1| GENE 161 178354 - 178548 119 64 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313801400|gb|EFS42651.1| ## NR: gi|313801400|gb|EFS42651.1| hypothetical protein HMPREF9576_02285 [Propionibacterium acnes HL110PA2] hypothetical protein HMPREF9589_00472 [Propionibacterium acnes HL059PA1] hypothetical protein HMPREF9608_02079 [Propionibacterium acnes HL067PA1] hypothetical protein HMPREF9614_00176 [Propionibacterium acnes HL002PA2] hypothetical protein HMPREF9569_01302 [Propionibacterium acnes HL078PA1] hypothetical protein HMPREF9592_00505 [Propionibacterium acnes HL046PA1] hypothetical protein HMPREF9568_01029 [Propionibacterium acnes HL013PA2] hypothetical protein HMPREF9581_01186 [Propionibacterium acnes HL087PA3] # 1 64 1 64 64 110 100.0 5e-23 MSSQTNRAGRLVLTTQQSVIPGTIADNIESLLDDEGNESSHDGKGARSHTCDSAGPIRLP DHVP >gi|302034492|gb|GL383259.1| GENE 162 178759 - 180432 1480 557 aa, chain + ## HITS:1 COG:ML1512 KEGG:ns NR:ns ## COG: ML1512 COG0595 # Protein_GI_number: 15827796 # Func_class: R General function prediction only # Function: Predicted hydrolase of the metallo-beta-lactamase superfamily # Organism: Mycobacterium leprae # 3 557 8 558 558 526 50.0 1e-149 MTPPDLQPDVLRIIPLGGLGDVGRNMSCYEINGEMLVIDCGVLFPEDDHPGVDLLLPGLD YLDEEKLAKVKALVLTHGHEDHIGAVPYLLKRRPDIPIYGSKLTLALVEAKLREHRIKGY KLNVVHEGDVAEVGEQFDLEFIAVNHSIPDALAVCVRTDAGTLINTGDFKMDQLPLDGRI TDLRAFARLGEEGVDLFMVDSTNAEVPGFVKSETEIEPAIERVFEKAKKKLIVACFASHV HRVQQVLNMAVRHHRKVCYVGRSMVRNMAVAQDLGYLDVPENTVIELRDLDHYRDNEVVI ISTGSQGEPLSALARIANREHRDIEVGEGDTVLLASSLIPGNENAVYRVINGLTKLGAAV VHKGNALVHVSGHAAAGELLYAYNIVRPRAVMPIHGEVRHLVANADLAKATGVDENNVVL VEDGGVIDLVDGVPRVVGKVDASYILVDGSGVGELTEDTLTDRRILGEEGFLSVVTVVDT RSASVVSRPAIQARGFAEGDSVFAEITDQIVTELEKAMAGGMDDTHRLQQVVRRTIGRWV SRSLRRRPMIVPVVVKI >gi|302034492|gb|GL383259.1| GENE 163 180574 - 180759 334 61 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|213961153|ref|ZP_03389432.1| ribosomal protein L28 [Propionibacterium acnes SK137] # 1 61 1 61 61 133 98 8e-30 MAAVCDICAKRPGFGHNVPWSKKKTNRRWSPNIQRVRVVENGTHKRMNVCTSCLKAGRVS R >gi|302034492|gb|GL383259.1| GENE 164 180809 - 183058 1422 749 aa, chain + ## HITS:1 COG:MT3051 KEGG:ns NR:ns ## COG: MT3051 COG1200 # Protein_GI_number: 15842526 # Func_class: L Replication, recombination and repair; K Transcription # Function: RecG-like helicase # Organism: Mycobacterium tuberculosis CDC1551 # 26 730 8 718 737 518 44.0 1e-146 MGRYGDDVNAVTRWRTRTQKELHRPLAEAVGAKTAKAFSALHVGTVGEALGHLPRRYLTG TETTDLSHLVIDTEVALVADVVGVEVHTNKTVTGRERRPRQRLEVMLSDGKARLPVTFFG KPHIVSYWQRIFSAHTHGIFVGKVGEFRGNPQLVHPDFVMIDRNGKVVAGREEGKVMAAQ VQRHGLLGLYPQTSKLRTWEIASVESMLLESTPELEDTLPEWLRQEADLPSLWEAYHAIH YPHSVAEADRGAERLIWEEAIATQVTMAVRRRSAERHDAPVCSRRDGGLLVAFEDRLPFT PTVGQDEVSRVIDADLSADRPMHRLLQGEVGSGKTFVALRAMLQVVDAGHQAVLLAPTEV LAQQHYRTIINMLGDLASGEGLDAPEISTGVALLTGSMKAAGTRAALADIASGAAGIIVG THSLLSGRVIYNDIGLVVVDEQHRFGVEQRSVLTTGEGARPHELVLTATPIPRTVAMTVF GDLEVSSLRELPTGRADVQTTVVDLPAHGSWLTRAWRRIREECDAGHQVFVVCPRINSDD ADDVEGGRPPAAAVEELAPQLATGPLAGLRVEALHSRLDSSEKDLVMDRFIKGESQVLIS TTVIEVGVDVPNATMMVIMDADRFGVSQLHQLRGRIGRGNLPGLCLLVTTAPPGSVARER LDAVAASRDGFELAELDLAQRHEGNVLGSSQAGYSSPLRLLRVLDHAEIVTASKDLAERW VAEAPGDPRLLDVVTATEMLAEGNLMEQG >gi|302034492|gb|GL383259.1| GENE 165 183163 - 183585 439 140 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4531 NR:ns ## KEGG: HMPREF0675_4531 # Name: not_defined # Def: pyridoxamine 5'-phosphate oxidase family protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 140 1 140 140 274 100.0 7e-73 MINEENPITEVPEDSCWGYLDTAEVGRLATSVNDQPEVFPVNYVVDGQSIVFRTAAGSKL EDIVTNNRVAFEADGWTEEAGWSVVLRGKAEIITDDAELALCDKMPLLPWVPTVKRNYVR VEADQITGRTFAFGPEPKGN >gi|302034492|gb|GL383259.1| GENE 166 183722 - 184330 212 202 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764797|ref|ZP_02171850.1| ribosomal protein L29 [Bacillus selenitireducens MLS10] # 3 184 14 189 199 86 31 1e-15 MSRIIAGRAGGQRLTTPPGRLTRPTTDRVREAVFSALAAWNGTANEVPEVQLAGQAFCDL FAGSGAVALEAASRGATTVVAVDRDRCACNVMKDNSRTTRLRIEVSSQTVTAFLAQNHRV FDVVWFDPPYDLAADDMDSLILTACDGALAHNGLLVVERSRRSRDPRFPDGYESWNSRYG ETVVYYAQRTGEPEVDTGREQQ >gi|302034492|gb|GL383259.1| GENE 167 184327 - 184800 321 157 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 [Bacillus selenitireducens MLS10] # 4 155 7 159 164 128 42 3e-28 MKAVFSGSFDPITLGHVDIVARAAELVDEVVVGVAMNSAKNGIFSMDERVAFVKDAVADI PGVEVALVDGLLVDFCTEMGADAIIRGLRFGGDFDYELQMAHLNKAMSGIETILLPAGRE FGTISSSMIRSAACNGGNVSEFVPEMVNAALHERFPH >gi|302034492|gb|GL383259.1| GENE 168 184804 - 185061 151 85 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|314919257|gb|EFS83088.1| ## NR: gi|314919257|gb|EFS83088.1| hypothetical protein HMPREF9598_00087 [Propionibacterium acnes HL050PA1] # 1 85 1 85 85 173 100.0 5e-42 MLENPAHAIPLWGLWQNYHRPNCSTLDGFSESVGDIGCRSLGNRIAGEDSARQGEGYPLG NMINACAHEVYLGQCLVRPGIVEIG >gi|302034492|gb|GL383259.1| GENE 169 185144 - 185980 474 278 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4526 NR:ns ## KEGG: HMPREF0675_4526 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 278 1 278 278 545 98.0 1e-154 MPTDHRIVAYHQTHGHGDTFVDLSPLGASAPLTHLIVAALHIADDGTVILNDHPVDDDYH TQLWDQLDAVRSRGVRVLAMVGGWAPGTMCKLDGESLSIYYPGLRDFLTQRHFDGIDIDV EQEMSLPGVCTLIERFRLDFDEDFEIVLAPVASALHGGANLSGFDYQELHQLRGDDIDFY NAQFYSGFGSLASPDDYVSIVEHSIIPVNKIVTGMAGSPDAAQGFVDIATVSDTISTLCQ RYPNFGGVDVWEYPLALPGAPDHPDQWVHVMHHAMSHR >gi|302034492|gb|GL383259.1| GENE 170 186056 - 187771 1583 571 aa, chain - ## HITS:1 COG:TM1226 KEGG:ns NR:ns ## COG: TM1226 COG0747 # Protein_GI_number: 15643982 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Thermotoga maritima # 68 528 40 513 562 114 26.0 8e-25 MDPKPLSFPISRRSLLFTAGSIALTIPLLSACGSGDTDAKGSRSKKGTIAKDGVLTIGAA VSTSNVFPHNFNVFGGGDSAPGNAMFWETLFRISSKDGMKLVPNLAKEVKYTSGGKVATY KLRDDVTWNDGKPFTSKDVAFTYGFIFGPPGQSTEKDFKWLAKPIETPDKHTVVVTYNEP QYTEDIPLSLYFPIYPEHIYSKVDHQNYVDKNPVGTGPGKLKSFAGQLIEIDIRDDYWGK KPKGVKTIKLVPAGTAGNIQSQITQGKVDWAEGGDPGVITSFLPMDKDHNGYNYYADGST RGIILSTHSLPTSDVAVRKALRASVDMGVVAKAGGVGYTVPSVTGLDPVIYANMLKPEFK KPMAPDVEAAKKFLKDAGWTVQNGNLCKDGKEYPLQLTIRNDNPVEMATMPIVVSQWKDN LGINVKFTPLPKEVFDPAQAMGEYDMSLWTTNAAGGAFNAYTMYMQTKNYKLGDKKADGN YGRWKCSKEADEAIANLPKVPQDDIKEITRRCQILQQAVYDDAPYIPVQNSGTGGMYTTK KWSGLKKAEDVDYFPRASGYNNMIHTVNDFD >gi|302034492|gb|GL383259.1| GENE 171 187863 - 188894 510 343 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 34 331 35 324 329 201 37 3e-50 MTGAHVDDRTAVLEARNVSLDFDGTDSSGSKVTIHALDRVNLTIHRGEITALVGESGSGK TSIARLFALIYKPTSGELYRNGELVHVHGKRAERAYYRDVQLIYQDPFASLNGLKKISTI LGRVFKIHYPKMRRKEIAQRIDDVLTKVNMTPPSRYLNRYPTDLSGGQRQRIAIARALAV SPQVLLADEPTSMLDASIRLDVLNLLSDLRETEGVSVLYITHDIASARYICDRINVMYGG RIVEAGPTKQIISDTIHPYTRLLLSAAPDPARYKGSANSTAIDIPEGAPMNNSVRVKGCR FAPLCPLAQPRCTEEELPKFHSEDGTREVTCWEAEERREFHRV >gi|302034492|gb|GL383259.1| GENE 172 188891 - 189982 891 363 aa, chain - ## HITS:1 COG:VC0617 KEGG:ns NR:ns ## COG: VC0617 COG0444 # Protein_GI_number: 15640637 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component # Organism: Vibrio cholerae # 21 338 5 317 327 296 45.0 4e-80 MTAQSSSTQARHGMTTDNEVLLEVKGLCVDYVTESGNIRACDNVNFLLRRGEILGVAGES ACGKSTLLNALGRLQRMPAATSAGQILFHDRNGSVTDLATLSEADLKPYRWTKIAVVMQS AMACLNPILKLSEQFIDVQRAHDPSLAEKDALTKSAELLEAVGISADRLSSFPFQLSGGM QQRALIALSLVCEPDLVLMDEPTTAVDVVMQRQILQEVLAAQKRLGFSIVFVTHDLSLLM EISDKIAIMYAGRIVEVGTPARFHSSARHPYTRGLRLAFPPLSEPLCRLEGIKGSPPDLL DLSTGCAFAPRCEFAMPICHQRIPELRTIDEGASACYLSNGELSDQELADQQKQATNHEE AIA >gi|302034492|gb|GL383259.1| GENE 173 189979 - 190911 947 310 aa, chain - ## HITS:1 COG:VC0618 KEGG:ns NR:ns ## COG: VC0618 COG1173 # Protein_GI_number: 15640638 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Vibrio cholerae # 57 309 84 335 341 170 36.0 3e-42 MVKRFLGVGKVQVGLAIMLFFILVAILGQPFCTHVLHTSPYQVDYMTLGGTAPGGKHWLG TTSAGQDVLAWMLYGTRNSVVVGLASAVIGTVLTVVIGTWAGFSGGWIDRFLNGFILVFA NIPTFAILFMIAGVMQNAGWLLVSLVIGCFEWSGGARQIRAQAMSLRGRDFTTALRTIGE SQSHIVLSEVMPHLLGLISPMFLRLIAAGVNMQASLAFLGIGDPSMPSWGLMINWAMTQN ALFRGLWWWFIPPGLALALIGFATTMINFGLDEVTNPTLSTKRMKLMRKFEKAKKLAAAK HPTHAEETAA >gi|302034492|gb|GL383259.1| GENE 174 190914 - 191111 197 65 aa, chain - ## HITS:1 COG:VC0619 KEGG:ns NR:ns ## COG: VC0619 COG0601 # Protein_GI_number: 15640639 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Vibrio cholerae # 5 63 267 325 328 57 45.0 6e-09 MTAVILAEAVFIYPGIGSLLSGAQGHRDYPVMQGIMLMIIFMSLLFNFIADSVYVILDPR TREEA >gi|302034492|gb|GL383259.1| GENE 175 191161 - 192039 506 292 aa, chain - ## HITS:1 COG:Ta1328 KEGG:ns NR:ns ## COG: Ta1328 COG0601 # Protein_GI_number: 16082316 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Thermoplasma acidophilum # 46 268 13 234 340 141 32.0 2e-33 MTSPGHPEPTAQELPTTADPAVDPSHAQPQTSGRSRRPHRRGGGAFLLKRLGTYLIVAVV SVLLNFILPRFMPGDPATQLIKDIVAKTGAPPSGYQMRLIKARYGDPDRSVLLQFWDYLV QLVHGDLGKSIEYYPVNVTTLINQALPWTLYLAIASTILGWIVGTWLGVRLGWKPGRKLD SIVTPLSMFFSSIPAFWLGLLIVWYFAYKNGWFPNQGAYDNELTMSLTNGHFIASVLMHS VLPFFTLVIVGFAGWLFSMRNMMITTVNDGLCPARPRQGSVVLAHSQSLRRA >gi|302034492|gb|GL383259.1| GENE 176 192196 - 193764 933 522 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4518 NR:ns ## KEGG: HMPREF0675_4518 # Name: not_defined # Def: glycosyl hydrolase family 20, catalytic domain protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 522 1 522 522 1026 99.0 0 MTTMSAGTSWFPVNAARYDDSFRGFMLDVSRDRVPTRSTLDFLTRVMARCGLNHLELYGE AGFAYRGEEEVWADRSPVTAEDMRWLDGLCRGRGIELGANQNCLGHMEPWLETESHHHRC ENPDGVDLPWGVHARASTLAPVPENLDFVQRLLGELTETVSSKFLNVGLDEPWELGTGVS ADRCRDEGKGVVYAKWARDVVTPWLDRGWRVAMWADIVNSHPEALDIIPDEVLLIPWTYE SPAMEAKFAGTEGYEIRSDAGFASTARLVANAGRPFVNAPGTGAWNTFTGRLSNAVGNIV DAVITDHSLGGKGVLLTGWGDSGHHAGLVFSLVPLVVTGVAIADPDHAEGLNSAKSLVNA VSQALFDVDDHPGAHLLVGAGLLEDKLGVIRRNHSLPARCLLEGDPGDDLGADGIAATRA EIARLHDRANETEAALGGGPIGWVEDVRIGLDLVCHSLDVLTGGELTVSPALLDRFATAW LRTSRPRGLARSMARLPGGADYEEVAAKPVSGLEHWRGLLGL >gi|302034492|gb|GL383259.1| GENE 177 193724 - 194950 507 408 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4517 NR:ns ## KEGG: HMPREF0675_4517 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 408 1 408 408 793 100.0 0 MKIGANYTPSQGWFHSWLDLDIDATRRDFEGIAQLGLDHVRLFPLWPLLQPNRGLVRPRA LDDVVSVVRAAGEFDLEVTVDALNGHLSSYDFLPSWVITWHTSNLFTDPLVKAGQTDLIS QLATRLREEPNATGMTVGNEFPQYAALAPGHHHPTRSECTVDDAQTWLETMLGTMRDQWP DGRFWFGFDDDLWFVDDHPFTPRHAVTQGSATTVHSWVFAQVGPRFGEGHPALTWFPRYL LELARAWSHDPERPLWLQEVGAPRTHVPDSSSAAFMTTTMASLTSTPGLEAITWWCSHDV SRDLLDFPELEYSLGLFTNDGKPKPEALALSDMLPDLHNAQPQHQLDEPLEFSANWDTGA GRSVCSPMGDLFAQWVDQAEQTGRAPRLALRPTPGLTDREALASARAH >gi|302034492|gb|GL383259.1| GENE 178 194947 - 198030 1920 1027 aa, chain - ## HITS:1 COG:SPAC513.05 KEGG:ns NR:ns ## COG: SPAC513.05 COG0383 # Protein_GI_number: 19114891 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-mannosidase # Organism: Schizosaccharomyces pombe # 74 1023 94 1075 1077 436 30.0 1e-122 MHDHAPILDDRVHRHLAEKIRPAETTTVCHLNVEWAPVTDTVEGLNSRPGVVGQGEPISI SAGLALAYEPFRIGDTWGPPWGTTWFHLTATVPPKHRDDHLEMIVDLGGVWDSPGFQSEG LVVRPDGSIIKALNPRNTWIPVETDTEGHIDVYVEAASNPILLAQPPFQPTEDGDKLTAS TDTYYSLKRADLVVVNDEVRELIADIVTLSGLAAQLPEDSERRWDVRRALDRAMDRLDLF DVVSSASAARSELAPALTRPAHDSAQTMTAIGHAHIDSAWLWPLRETRRKVARTISNQLN LIDTDPAHIFAFPAAQHSAWLEEDHPDLFARLQKAVKDGRIIPVGGMWVESDANLPGGES MCRQLLYGQRYFMAKFGHHCPEVWLPDSFGYSGALPQLAKLAGAHWFLTQKISWNQVDKF PHHSFWWEGIDGTRIFTHFPPADTYGSDLSAHDLEHARANFQDKGRSNSSLVPFGYGDGG GGPTREMLAQARRVADLDGSPKLAIEPPATFFSRAESEHEDPGTWVGELYLELHRGTFTS QYEVKKGNRRNEHLLRDAELWCATAAVRELMDYPGERLAEIWRTICLYQFHDILPGSAIA WVYREVVADHRRISDELTELIHHAQELLAGEGDEEIVFDSAPMARPWASTVAMGGSKAPS ITEGVHAEENEEDFIVDNGLLRMTVDAHGLITYLVDTASGRDAIPAGQRGNLLQIHPDFP NMWDAWDIDPFYANTVTDLDDGQATMSRKDGSVTISVTRTFGHSSATQSLTVNPGDPRVK VHTHVDWHEQDSLLKLAWPVDVHTDHADYEIEMGHITRPTHTNTSWDAFRLEVNAHRWVY VSEPGFGVAIANSGTYGWNVSRHPKDNGGTWSVARASLLKGARFPDPRADEGEHDFFHTL HVGADLADAIRDGYAANLCVRRRQGSPVEPLVSVEGVAVEAVKLAEDGSGDVIVRLYEPY GRHVHTTMTLGFEATSAVEVDLLEDPLDGNPHAQVAPSVVTADLADGTIGLSMRPFQVAT LRLGRNR >gi|302034492|gb|GL383259.1| GENE 179 198383 - 198589 85 68 aa, chain + ## HITS:1 COG:no KEGG:PPA1458 NR:ns ## KEGG: PPA1458 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 33 68 35 70 70 69 91.0 5e-11 MTRRLVRLIVLMTWCAIRSATTWLGRTSKARLGHDISQHRELVTDMELARPIRQGAEAFY LSLQIALK >gi|302034492|gb|GL383259.1| GENE 180 198679 - 199689 708 336 aa, chain + ## HITS:1 COG:BH3692 KEGG:ns NR:ns ## COG: BH3692 COG1609 # Protein_GI_number: 15616254 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus halodurans # 4 335 2 336 337 141 29.0 2e-33 MDRTTIKDIARVAGVSPGAVSFALNDKPGVSDSTRARVKAVAKDLGWRPNVAARALSANR AGAVGLVIARDDRSFAGEGFFLHLIAGMEEILTPARTALVLQLVASREEECEVHRQWWAQ RRVDGVVLVDPARNDPRWPLMADIKMPCTVVGAMSDTPLPGVHIDDAAAAGNIVTHLINQ GHRRIAHIGGDPTLEHSMVRRRAFAQEAERLGAVVIEAAATDYSEQSGLRETSALLKIGD RPTAIVYDNEVLTLGGLAAVAEHRLQVPTDISVVSFEDSPACRVMSPGITALRRDPSVLG RDAITMLMGILGGDDVEDVTEQPPELIVRGSTGQAQ >gi|302034492|gb|GL383259.1| GENE 181 199710 - 200606 620 298 aa, chain - ## HITS:1 COG:all4824 KEGG:ns NR:ns ## COG: all4824 COG0395 # Protein_GI_number: 17232316 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Nostoc sp. PCC 7120 # 35 298 16 279 279 172 35.0 6e-43 MSTAQATRPAKQKPWRSRHAFDPTRPTLAGLIGRYLLLIFVVIISIGPFLWQLSTSLKSV NENIYSFPPHLIPQEFTIDAYRRVAHVVPILRYAWHSVIVAAVCVVGNVVLASLAGYALT CMKFRGKKVVMGILLSVLLLPGEVTLTSQYLVIKGMGLANTLTGVAIPGVVGAINVLLMA TACRAVPPSVLDAATVDGANTWSKIRHIVWPNIKGMASVVAVFSFIGAWDDFLWPLVVLN DPDKYTLTVGMQYLSSTMSTDPREVAAGTVIALIPIIIIFASMQKVFFRGVESGGVKG >gi|302034492|gb|GL383259.1| GENE 182 200603 - 201559 741 318 aa, chain - ## HITS:1 COG:alr0738 KEGG:ns NR:ns ## COG: alr0738 COG1175 # Protein_GI_number: 17228233 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Nostoc sp. PCC 7120 # 5 276 14 290 308 169 35.0 8e-42 MNSHRWYTPWLLVAPAVVWTVVFALYPFINTIILSFTNTRPLVGGEFIGFANYAELWHDD MFWNAMVTTFIYVIICIPLLTILPLLLALLVEKKIPGISFFRTVAYFPVIASVVVVALIW SWMFDSRGLINQSLQWMGATSSPIPFLVDRWKLLGCAILLTVWKGLGYYMIVYLAALGNV DHDLHEAAALDGAGTFQRFRNVTIPGIRPAMVLIIALIAVSGMRIFSELYVLTNGTGGPG GEDSSLVMVIKQVGTGLSGQLGYASALSVVLFFLTLIPLTVIGWANNKDLRSGRQTRRGE GRARRAAAIQSATKETMA >gi|302034492|gb|GL383259.1| GENE 183 201639 - 202949 1310 436 aa, chain - ## HITS:1 COG:slr1897 KEGG:ns NR:ns ## COG: slr1897 COG1653 # Protein_GI_number: 16329947 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Synechocystis # 43 434 32 431 433 152 28.0 1e-36 MGNFTIGRRQLLGGTAALATVLAASACGMSGSGDKPSSQASVNPSAKLEGSIQFQTWSLK NEKFTPYFKKLVKSFEKEHPGTTIKWVDQPGEGYEEKVQQQATAGQLPDVINIPPNFAWQ LLKANKVMDLKKADAAAINTYIKGGIDAYTYDGYDGVYGYPWYLGTDLNWWNTEAFEKYG LDPKKLPTTLDELYAQAITMAEKSHGTMPLISIAPALGDLAAQGVKVYKDGKFTFNTDQA VEIIQKYVELYAKKAMPPEVLQNNYLGNSKLFLQGKVAWTTGSASFPVDLKKSAPKLFPH VAMTTRIGVPPLFVQGICVSADSKNPNLALAFAQYVTNNANQVDFVNLAQGFLPGTKEAN ENTDSFTSVISDPQMKKAAEALAGEMKSAKIGEPMAYTDAMKAYVGQQISSAMRGDISAK DALDRAVKYCNDHVTK >gi|302034492|gb|GL383259.1| GENE 184 203212 - 203772 175 186 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|170758590|ref|YP_001787770.1| ribosomal protein L32 family protein [Clostridium botulinum A3 str. Loch Maree] # 62 175 48 160 166 72 34 2e-11 MNTTHRHSDALSGLVLETHSLRRQVGQMIRVQRTVPAPADLDVDMIGVPEDSPLELDLRL ESVGEGVLATGTVEATLEGECSRCLDPIKEELLLDVQELYFYPDKEADEDASRVSAEETI DLDPVVRAAVVLNLPFSPLCRDDCGGLCPDCGANLNDDPDHDHPDRIDPRWSALEGLVGG DDSDRS >gi|302034492|gb|GL383259.1| GENE 185 203836 - 204027 345 63 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|213961304|ref|ZP_03389583.1| ribosomal protein L32 [Propionibacterium acnes SK137] # 1 63 1 63 63 137 98 4e-31 MAVPKRKMSRSNTRHRRSQWKTVATKLVTCANPACGEKHLPHTACPSCGGYGPRGDRRQV VEA >gi|302034492|gb|GL383259.1| GENE 186 204038 - 204778 279 246 aa, chain + ## HITS:1 COG:MT2995 KEGG:ns NR:ns ## COG: MT2995 COG0571 # Protein_GI_number: 15842471 # Func_class: K Transcription # Function: dsRNA-specific ribonuclease # Organism: Mycobacterium tuberculosis CDC1551 # 22 206 8 195 240 189 53.0 4e-48 MHASRDQNIGRPDVEDWPFLALLEELGIRCDPQLLDLALTHRSYAFENGGIPTNERLEFL GDAILEVGVTDYLYRAFPDKPEGQLAKLRSAVVSTVSLGQLARQLGIGPRIKLGKGEERT GGHDKTSILADTTEALLGAVELSAGLPDVLRLVHHLFDPLVDEADRSGAGTDWKTVLQEY CAEHGFDAPRYEIVGSGPDHNRRYCARANVDGRLHAAYTGHNKKEAEQGAARRAVSALMP SSHTGA >gi|302034492|gb|GL383259.1| GENE 187 204771 - 205541 368 256 aa, chain + ## HITS:1 COG:Cgl2021 KEGG:ns NR:ns ## COG: Cgl2021 COG0266 # Protein_GI_number: 19553271 # Func_class: L Replication, recombination and repair # Function: Formamidopyrimidine-DNA glycosylase # Organism: Corynebacterium glutamicum # 1 252 1 258 286 226 47.0 2e-59 MPELPEVETVRAGLEQFVVPVVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVNR RGKYLWFILDDGTAMLAHLGMSGQFRVSTQHAPQHRHTRIVITLDDGRDLRFLDQRTFGG LTLAPLVDGIPGPVTHIAPDPFEECFDVDEVVRRLCARRSAIKRSLLDQTLVSGIGNIYA DETLWRVRCHPETPCSRLSQSEAVELLQTACDVMAEAMSQGGTSFDSLYVNVNGESGWFS RVLDAYGREDEPLPPM >gi|302034492|gb|GL383259.1| GENE 188 205565 - 205780 123 71 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4506 NR:ns ## KEGG: HMPREF0675_4506 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 71 13 83 83 107 100.0 1e-22 MGMELQLGSLESASERLIESSLFAFSPTDVDRRSINPPTQGNGATAALAMPDDGRITVVS DTSGIGTSSGS >gi|302034492|gb|GL383259.1| GENE 189 205938 - 206279 302 113 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4505 NR:ns ## KEGG: HMPREF0675_4505 # Name: not_defined # Def: HicB family protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 113 1 113 113 223 100.0 3e-57 MSQTITDTARYSFHVTWSPEDAEFIATCVEFPSLSWLAGTPEKALTGLRIVVDEVVDDMR ANDEPVPEPLSTRHYSGKFQLRLGEDLHRRLVIEAAEQHLSLNQYVTRKLAVS >gi|302034492|gb|GL383259.1| GENE 190 206279 - 206491 141 70 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4504 NR:ns ## KEGG: HMPREF0675_4504 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 70 1 70 70 126 100.0 2e-28 MRANPRTTMQTCSACARSSSEQPGTTGGSHAVFKTPWLGDLRVNIQNDHGKAKTYQVRQV LQAIEKLKEQ >gi|302034492|gb|GL383259.1| GENE 191 206885 - 207544 524 219 aa, chain + ## HITS:1 COG:no KEGG:PPA1448 NR:ns ## KEGG: PPA1448 # Name: not_defined # Def: GtrA-like protein # Organism: P.acnes # Pathway: not_defined # 1 219 1 219 219 419 100.0 1e-116 MGGFRSLGIRPIISRVITEPTAPTRRRIKKRHLIEFIKFGVVGGSGFLVNIIVAIIMNKA NGGTEHAQDILFNLAGTRWNFRFTSLVWLVGFVVANITNFQLNRSWTFKREYRRGWWREF WPFFAVGSIAAIIGMFIKIFFTNPTSPIYLPEPWFNEGRGIQSREYWSQIFAIIVTMPIN FVVNKLWTFRAVKHSGELPMVASAVVPESYDDGDAAESR >gi|302034492|gb|GL383259.1| GENE 192 207604 - 207771 97 55 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4501 NR:ns ## KEGG: HMPREF0675_4501 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 55 1 55 55 94 98.0 1e-18 MVVFIIAMVLILAVALGVCAVVMLGLRHPGADPDASFWRYTATRVGEDLSGVRHR >gi|302034492|gb|GL383259.1| GENE 193 207822 - 209012 660 396 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762490|ref|ZP_02169555.1| ribosomal protein L28 [Bacillus selenitireducens MLS10] # 117 391 46 322 336 258 49 1e-67 MNPITLIWIILGILVLVTVVAAVTAGVSRRKALREGSKPAQVSPAPTESGKTVPEAETPA GGESAVGRPESEASQVAEPAVEAPEAPGSRMARLRRRLANSNNALARGLAELLSADKLDD DAWDDFETTLITSDLGVGPTTELVEKLRSELAIDGISDPAHAREVLHHELVELVGSDMDR SINLDRLEGKPAVVLMVGVNGTGKTTTCGKLARVLVAEGKTVLLGAADTFRAAAGEQLET WGERVGVRTVRKDAGADPASVAYEAVQTGIDEGVDVVLVDTAGRLHTKAGLMDELGKVKR VIEKLAPVSEVLLVLDATTGQNGLAQARVFSEVVDVTGIVLSKLDGSAKGGIVVQVQREL GVPVKLIGLGEGADDLAPFDADNFVTGLMGDDSAEC >gi|302034492|gb|GL383259.1| GENE 194 209023 - 210204 917 393 aa, chain + ## HITS:1 COG:MT1677 KEGG:ns NR:ns ## COG: MT1677 COG0627 # Protein_GI_number: 15841095 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Mycobacterium tuberculosis CDC1551 # 35 285 88 344 489 61 24.0 3e-09 MTDIAWFAPTGGVMMVSILSHKLCVAVLIAAFALPLAFVVWRAIAGTGSWWRKILRGLGH LVVILLAQALLITGVFLYINREYGFFTSWSDLLGEVQPEAPTHDLVPIRRTKVKDIPISK SNPHPNGQVSAITVPGADAQYARVPVWLPPQYFEKSERRTRFPVLFYIGGVNDTGQRDNK SIDFIGPATELIKGRKVNPFVIVFLPGKIRDGVDSECVDVGPYRHETWIMKIVIPRLESH YRVGHERGSRFIGGWSTGGYCAANLSTKYPRAFNAGFSLGGYYHPMFENPRIANMARPLM ANSSVVRRVQERKIERSVRFLSVLNPNDLQSWGPGRVPVVSNGQVGPDGGQFYHVAKGMK QFTFILLTGGGHRVSVYTPYIEQSLQWLGQFGL >gi|302034492|gb|GL383259.1| GENE 195 210280 - 211866 1549 528 aa, chain + ## HITS:1 COG:MT2984 KEGG:ns NR:ns ## COG: MT2984 COG0541 # Protein_GI_number: 15842459 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal recognition particle GTPase # Organism: Mycobacterium tuberculosis CDC1551 # 1 442 1 445 525 528 67.0 1e-150 MFDTLQDRLASTFKGLRGKGRLTDADIDATTRQIRIALLEADVNLSVVKEFVAAIKERCH GEELSKALNPTQQIVKIVNEELVEILGGQTRTVRFAKTPPTIVMLAGLQGAGKTTLAGKL ARWFKEEGHSPLLAACDLQRPNAVTQLQVVGERAGVHVFAPEPGNGVGDPVQVARDAVAE AEHKLYDVVIIDTAGRLGVDAEMMAQAADIKTATDPDETLFVVDAMIGQDAVNTAVAFQE GVGFDGVVLTKLDGDARGGAALSIARVVGKPIMFASSGEGLKDFDVFHPDRMASRILDMG DMLTLIEQAEKAFDQEQSQAAAAKLMAGKGEFGLDDFLGLMRQMRRMGPMSKIMGMLPGV GQMKGQIENIDEREIDRIEAIICAMTPAERADVSILNGSRRARIANGSGVEVRDVNNLVN RFVDARKMMSQMGQMMGPGAGRMMGSMAKRGSKQSKKKQKNRKGSGNPAKRAAQARQAAK KPQRSSGEAFGLQGQQQPSQEDLQKAMSEFKMPPSMQQMFNQTNKRPR >gi|302034492|gb|GL383259.1| GENE 196 211943 - 213106 1031 387 aa, chain + ## HITS:1 COG:Rv2915c KEGG:ns NR:ns ## COG: Rv2915c COG1228 # Protein_GI_number: 15610052 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Imidazolonepropionase and related amidohydrolases # Organism: Mycobacterium tuberculosis H37Rv # 34 383 16 366 370 365 58.0 1e-100 MTEDTQPLFHTHTHDGWTHTHMAREAQTAPDEDLRIRGVVLPDGEERELWVHDGVLVEGP LSGARTLADGCWIIPGLVDAHNHIGLDAHGAVGTETADEQARTEAKTGTLLIRDAGSPSD THWIDDRDDLPRVIRAGRHIARPKRYIRNYAAEVDPENLVAEVDRQARSGDGWVKLVGDW IDRDEGDLAPLWPADIAQAAIDRAHELGARVTAHCFSEEAPAQLVDAGIDCIEHGTGLTD ETIATMAEREVGLVPTLINIETFPSIAAQADGKFPKYAAHMRHLHTHRHETIAKAWDAGV PIYAGTDAGGTIKHGLIASEVRLLAAVGGAEMALGAASWRARAWLGGEQLGIGDSADLLV LDRDPRVDVGVLESPTYIVLRGRVVIR >gi|302034492|gb|GL383259.1| GENE 197 213297 - 213740 746 147 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50842922|ref|YP_056149.1| 30S ribosomal protein S16 [Propionibacterium acnes KPA171202] # 1 147 1 147 147 291 99 1e-77 MATKIRLKRLGKIRTPHYRVVVMDSRAKRDGRAIEEIGQYHPKADPSVIVIDSERVQYWL GVGAQPTEAVVALLKRTGDWQKFTGDTSPSGVKPQPERPNKDDLFNAALAEADEAPREAI TKKSEGAAADEASESAAGDNSGEKAEA >gi|302034492|gb|GL383259.1| GENE 198 213743 - 214021 174 92 aa, chain + ## HITS:1 COG:MT2976 KEGG:ns NR:ns ## COG: MT2976 COG1837 # Protein_GI_number: 15842451 # Func_class: R General function prediction only # Function: Predicted RNA-binding protein (contains KH domain) # Organism: Mycobacterium tuberculosis CDC1551 # 1 78 4 80 80 70 57.0 6e-13 MLADALEHLVSGIVANPDDVRVREKDLRRGRMLEVRVNPSDIGKVIGRQGRTASSLRTVI GALAGDEQIRIDFVDVDRRGSGRHSDHRGHRH >gi|302034492|gb|GL383259.1| GENE 199 214147 - 214668 211 173 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163796730|ref|ZP_02190688.1| 50S ribosomal protein L19 [alpha proteobacterium BAL199] # 3 158 5 159 179 85 38 1e-15 MEVVVGRVGRAHGLRGDVVVEVRTDEPDARFGVGATVQIEGSRRDLTVVRSRWAKGCLIV AFDEVKDRQGAEELRGSVLVVDVEPNDDPDDPDEFWDRRLRGLTVVDESGKSRGAVKDVL HMPAQDVLVIDVSGEEHLVPFVHQLVPTVDVASGWIVVSGIPGLLDSNAEEAR >gi|302034492|gb|GL383259.1| GENE 200 214671 - 215390 378 239 aa, chain + ## HITS:1 COG:MT2974 KEGG:ns NR:ns ## COG: MT2974 COG0336 # Protein_GI_number: 15842449 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-(guanine-N1)-methyltransferase # Organism: Mycobacterium tuberculosis CDC1551 # 1 234 1 230 230 256 56.0 3e-68 MRLDYLSIFPAYFDVLDISLLGKAAVNGLVEVHAHDLRDWTHDRHRTVDDTPCGGGAGMV MKPDPWGEAFDEIIGTEPDSSVHVIFPSPSGAPFTQSAAQELSSAVRIVFCCGRYEGIDH RVIDYARSMWTVHEVSLGDYVLNGGEVAALAITEAVVRLVPGFMGNPESLAEESFSAGQD GLLEYPLFTRPVSWRGLDVPEVLMSGHHGRIAKWRRDESVRLTCERRPDLTDSDFGVPH >gi|302034492|gb|GL383259.1| GENE 201 215325 - 215561 120 78 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSSKCCSRHGPKTSQLPALLRPHPLCFRKLPSTLGSLRVLLLIIATFSVRILSIRDASMG NTEVGIRQIRTPLTRQAD >gi|302034492|gb|GL383259.1| GENE 202 215601 - 216251 588 216 aa, chain + ## HITS:1 COG:no KEGG:PPA1439 NR:ns ## KEGG: PPA1439 # Name: not_defined # Def: succinate dehydrogenase cytochrome b-558 subunit # Organism: P.acnes # Pathway: Citrate cycle (TCA cycle) [PATH:pac00020]; Oxidative phosphorylation [PATH:pac00190]; Butanoate metabolism [PATH:pac00650]; Metabolic pathways [PATH:pac01100]; Biosynthesis of secondary metabolites [PATH:pac01110]; Microbial metabolism in diverse environments [PATH:pac01120] # 1 216 29 244 244 363 100.0 2e-99 MAVTGLILILFLLMHMFGNLKLLASNEEFNRYAGFLRTILNPILPGESFLWIFRIFMLLA IVLHIWSAIRVNKQRNIGTGGAGRYSVKKNLSPENTYAARTMFWGGWIIFLFLILHLLQF TISPDLLNNPPTDAAGRAGMVLTAFSHWWFVLIYLIAMIAVCMHVSHGFWSAFATLGVNV SGTARAVLRVCSWIVAIVIFVGFMTPPFLVLFGVIS >gi|302034492|gb|GL383259.1| GENE 203 216251 - 218278 2036 675 aa, chain + ## HITS:1 COG:Cgl0367 KEGG:ns NR:ns ## COG: Cgl0367 COG1053 # Protein_GI_number: 19551617 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Corynebacterium glutamicum # 33 675 36 673 673 602 48.0 1e-171 MTATAASNNNAALADQYWTTGDEIHDTKANHDLPIEKIWTDRQFTSRLVNPANRRKMTVI IVGTGLAGGAAAATLGEAGYRVENFCYQDSPRRAHSIAAQGGINAAKNYKNDGDSIYRLF YDTVKGGDYRSRETNVYRLAAVSANIIDQCVAQGVPFAREYGGLLDNRSFGGVQVQRTFY ARGQTGQQLLIGAYQALERQVHAGTVHMHTRHEMVELIVADGRARGIVTRDMVTGKIEEW FGDAVVLATGGYGNVFFLSTNAMGCNATASWRAHRKGAYFGNPCYTQIHPTCIPVHGENQ SKLTLMSESLRNDGRIWVPKRAEDCEKDPRDIPEEDRDYYLERIYPSFGNLVPRDIASRQ AKYRCDEGRGVGPKVREVDSDGTEHMRARGVYLDFSEAIQRMGKDAVEKKYGNLFDMYQR ITDENPYEVPMRIYPAVHYTMGGLWVDYDLQSTIPGLFVCGEANFSDHGANRLGASALMQ GLADGYWVLPNTITDYLADSPKFGMVDEKHPSAVEARQAVESRINKLLTINGTRTVDSIH KELGHIMWEYCGMERSEAGLIKAIGLIRNLRNEFWTNVKVTGVNEELNQTLERAGRLADF LELGELMCIDALHRRESCGGHFRAESQTEEGEAMRHDDEYQYVAAWEWTGEGHKPTLHKE PLVYKSIQVKQRSYK >gi|302034492|gb|GL383259.1| GENE 204 218275 - 219048 650 257 aa, chain + ## HITS:1 COG:Cgl0368 KEGG:ns NR:ns ## COG: Cgl0368 COG0479 # Protein_GI_number: 19551618 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit # Organism: Corynebacterium glutamicum # 1 257 1 249 249 249 46.0 5e-66 MKINLRIWRQRNSKDQGRLVEYTLDGVSGDMSFLEMLDMLNENLTAQGEEPVAFDSDCRE GICGQCGVVINGVPHGGMGAAQPVRTTTCQLHMRSFADGSTITIEPWKSGAFPILRDLIV DRSALDRVIQAGGYVSVNTGAAPDAHAVQVNKKRSDRSFDAATCIGCGACVAACPNGSSM LFTSAKITHLAMLPQGQPERMRRVKAMAAQNDAEGFGGCTNIGECASVCPKGIPLESISQ LNRDLIASLFKHDGKDD >gi|302034492|gb|GL383259.1| GENE 205 219299 - 219652 588 117 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50842915|ref|YP_056142.1| 50S ribosomal protein L19 [Propionibacterium acnes KPA171202] # 1 117 1 117 117 231 100 3e-59 MSNIIDEIDKASMRDDIPEFRPGDSVKVHVKVVEGSRTRVQVFSGIVISRTGGGVQESFT VRKLSFGTGVERTFPLHSPIIDKIEVDRHGAVRRAKLYYLRGRRGKAAKIKERGSAR >gi|302034492|gb|GL383259.1| GENE 206 219823 - 220647 459 274 aa, chain + ## HITS:1 COG:Cgl1987 KEGG:ns NR:ns ## COG: Cgl1987 COG0681 # Protein_GI_number: 19553237 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal peptidase I # Organism: Corynebacterium glutamicum # 39 248 37 260 262 105 34.0 1e-22 MADDYRARRAANGDTRDSDDATARGEQASGWQRFRSGAIEVVLIVVGALIISAVLRGFVA QMFVIPSKSMQNTLQVGDRVIAVKAADFHRGDVVVFKDTEHWLPAAQDRRSVPGQILEFV GLLPNKSSNYLIKRVIGMPGDTVACCNVNGQVTVNGKALDERSYLYSENGEMVKPSAMEF RVTVPRGRMFVLGDHRNASGDSRYHLQDLDPGEYTGAPAFVPLDDVVGPAKAILMPLNRI EGLGTPDIFRGILDRSSSAPGKARICVGNACCPK >gi|302034492|gb|GL383259.1| GENE 207 220656 - 221297 333 213 aa, chain + ## HITS:1 COG:ML1611 KEGG:ns NR:ns ## COG: ML1611 COG0164 # Protein_GI_number: 15827847 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HII # Organism: Mycobacterium leprae # 13 206 24 215 240 196 58.0 3e-50 MSVRVGSGPMGHERALARAGLGPVAGCDEAGRGACAGPLVAAAVILDDRRSGRIAGLADS KTLSAAKREALFNVIMDKALAVSWVRVEADECDRLGMQEADISGLRRAVVRLGVEPGYVL SDGFPVDGLTVPDLGMWKGDSVCACVAAASIVAKVARDRIMIAMDAEIPGYDFAVHKGYA TALHQRRLKELGPSRQHRMSYANVRRAARLHSS >gi|302034492|gb|GL383259.1| GENE 208 221294 - 221605 398 103 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4486 NR:ns ## KEGG: HMPREF0675_4486 # Name: not_defined # Def: protein often found in Actinomycetes clustered with signal peptidase and/or RNaseHII # Organism: P.acnes_SK137 # Pathway: not_defined # 1 103 1 103 103 182 100.0 3e-45 MSAEDLEQYENRMELELYREYKDVVGIFKYAVETERRFYLCNVVDLKVRTEGGDVYYEVS MADAWVWDMYRPSRFVKSAKILTFRDVSIEEIVHADFDEVPSK >gi|302034492|gb|GL383259.1| GENE 209 221873 - 222292 356 139 aa, chain + ## HITS:1 COG:Rv2898c KEGG:ns NR:ns ## COG: Rv2898c COG0792 # Protein_GI_number: 15610035 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease distantly related to archaeal Holliday junction resolvase # Organism: Mycobacterium tuberculosis H37Rv # 25 138 9 127 128 98 47.0 4e-21 MTPKPLSAELTTPRGAALRGRRGCRPAFGAWGEDLAAQYVESLGWTIIARNWTCDVGEID LIARDDQTVVFIEVKARSGTGFGDPLESITTAKVRKLHELALAWLVNQDDGVHSVRIDAI GVMVRPGAEPTVTHVRGIR >gi|302034492|gb|GL383259.1| GENE 210 222340 - 223812 369 490 aa, chain + ## HITS:1 COG:Rv2897c KEGG:ns NR:ns ## COG: Rv2897c COG0606 # Protein_GI_number: 15610034 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATPase with chaperone activity # Organism: Mycobacterium tuberculosis H37Rv # 1 486 18 503 503 400 52.0 1e-111 MVEVEAAISSGLPRTVLVGLPDAALHEARDRCRAAVCATGLSWPSNVLTINLTPAGLPKA GTHFDLAIAAATLAADGKVPQALFGSTVLIGELGLDGRVRPVRGVLPALLAAREAGFERA VVPASQSDEASLVEGLTIWPVGHLGDVVDVLHGRPVVPPEGPIVGSPDTDPGIGDLTEVI GQHEARRALEVAAAGRHHILLRGAPGCGKSMLARRLPGILPRLDHRDALEVTALHSLAGR GSGRLMTRPPLAQPHHSVSMAAMVGGGVRIAQPGAISLAHRGVLFLDEAPEFAPKVLDSL RGPLETGEIVIGRSQAHTTFPARFQLVMALNPCPCGLADDPSGRCTCTPQQVRRYSGRLS GPILDRVDVTVRMRPLTSAHLLDASALPAGESSAAVHERVAQARERAAARWRGVPWRCNA EVPGKVLRQMLPANDATRIIEDALTTGRLTARGVDKVLRIAWTVADLEGKDEVDKACVAE AMGMRRGRLR >gi|302034492|gb|GL383259.1| GENE 211 223809 - 224942 260 377 aa, chain + ## HITS:1 COG:Rv2896c KEGG:ns NR:ns ## COG: Rv2896c COG0758 # Protein_GI_number: 15610033 # Func_class: L Replication, recombination and repair; U Intracellular trafficking, secretion, and vesicular transport # Function: Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake # Organism: Mycobacterium tuberculosis H37Rv # 11 370 24 371 389 187 42.0 3e-47 MTWTSERLARAALTAAAEPGVMAKRLVEMTAEELWQHMLTDSGERWHKRAKSLDVDQLVE RSEKAAMRFLIPGDEEWPTGLDSLARVGKSGMGGAPVGLWVTGPAHLADISQRAVAIVGC RSASSYGQDVAVEMAYRLVRGHCDGTGSHTVISGGAFGIDVAAHRGALSARGNTVSVLAC GLDTLYPRGNSAVLEQIAGTGALVSELPLGRHPTRPGFLARNRLIAALTTGTVVVEAGWR SGAINTASWANALGNAVMAVPGPVTSSRSTGTNKLIRDGEAILVRDADDVRGIVGELAPE PERPAGRSLPTDILDAIELAVHEALPAHGSCGLDELAVLAGVPVAQCSAALSVLEQLGMA ACCLDGTWSVTLARERR >gi|302034492|gb|GL383259.1| GENE 212 224917 - 225444 187 175 aa, chain - ## HITS:1 COG:BH1021 KEGG:ns NR:ns ## COG: BH1021 COG0350 # Protein_GI_number: 15613584 # Func_class: L Replication, recombination and repair # Function: Methylated DNA-protein cysteine methyltransferase # Organism: Bacillus halodurans # 17 166 12 168 175 115 40.0 4e-26 MPGPLPAMTAQSQHRFDTAIGELEVTATAHGLSRLVFVKTDPSPPPLSTSHARRSGDIIS CAIAQITEYLSGSRTSFDVALDLSATTDFQRTVLTGLQTVPYGQTVSYRQLASIIGRPNA SRAVGHACATNPLPILIPCHRVLRSNGQLGGYLGGPRLKRFLLNLESVTSAPLPA >gi|302034492|gb|GL383259.1| GENE 213 225552 - 225767 256 71 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4482 NR:ns ## KEGG: HMPREF0675_4482 # Name: not_defined # Def: CsbD-like protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 71 1 71 71 74 100.0 1e-12 MGLSDKINSKSDEAVGAAKEKIGGLTDDSDLKSAGADQKASGKVAQKVEDVKDKANDLKH NVQAAADKLKG >gi|302034492|gb|GL383259.1| GENE 214 225984 - 226598 637 204 aa, chain - ## HITS:1 COG:no KEGG:PPA1425 NR:ns ## KEGG: PPA1425 # Name: not_defined # Def: putative lysophospholipase # Organism: P.acnes # Pathway: not_defined # 1 204 174 377 377 426 99.0 1e-118 MYPGTVDGIVSSGGGTIVNVDGPDTEGATTITPDNLNFFARHALPQISQLLPMAQLTSFN GRLVKDFVKNPKAIRMPSGPLSADIILPGYPPYGLCSDPAVRFDHWHRDPLYNHYMRLGL VEQMGVAEAYNVMNAHDFKAPTLIMHGENDGLVPSYFDVNWYNAITSKDKKIIQWHGLMH EIFNEPTKDQVIKTAIDWIDAHNK >gi|302034492|gb|GL383259.1| GENE 215 226579 - 227121 416 180 aa, chain - ## HITS:1 COG:alr0851 KEGG:ns NR:ns ## COG: alr0851 COG2267 # Protein_GI_number: 17228346 # Func_class: I Lipid transport and metabolism # Function: Lysophospholipase # Organism: Nostoc sp. PCC 7120 # 47 168 2 115 281 68 33.0 4e-12 MSFPRKLSALAVASTMAVTGVTMATPALANTGTSSQPAAAAPAINQVHKETGYFKTTDKL GTQLFYRKDIVPNAKGAVVLVHGLMENSSNYEYLTKSLTNAGYSVYRFDNRGHGRSAAPY INNAIPRGQFDDWWNIESDIHQVVGTAHKENTGKKVFLLGHSMGGIAVHTVLRNHVSRNC >gi|302034492|gb|GL383259.1| GENE 216 227941 - 229287 918 448 aa, chain + ## HITS:1 COG:MT2199 KEGG:ns NR:ns ## COG: MT2199 COG0624 # Protein_GI_number: 15841632 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Mycobacterium tuberculosis CDC1551 # 16 445 14 445 448 335 44.0 1e-91 MTVENLVDGPDCPQAEVVDICSRMIQIDSQNFGPQDARGEVEMCHYVTGLLDEIGVGVTL HESEPGRVTLVAEWAPEGTDTSRPALLLHGHSDTVPFEAADWTHHPLSGEIHDNCVWGRG AIDMKGFLAMVLSAIRARQRRGEVPSRPIRFIMFADEECSGTLGSTWLGATHPEAFDGVT EAISEVGGFSLTTPQGKRVYVIQSAEKGLWWFRMSATGSAGHGSMRNPDNAVTRVLDALS RIDSYQWPDLHHPVQEEFLNQVAAMWGLTIDRDDLESSLSPIGSLSRMVAACCAHNVTPT VLSAGYKVNVVPTRASAEVDARFIPGAEEDMILTIKSLAGPGIDFETISRKPATAAPFEG AAVDAIRRAVDAEDPGAVVLPYLNSAGTDAKGFAVLPDGRRINYYGCTPLRLPADFDFIN LFHGVDERVPVGSLVFGAKVVDHILQEA >gi|302034492|gb|GL383259.1| GENE 217 229290 - 230597 911 435 aa, chain + ## HITS:1 COG:BMEI0836 KEGG:ns NR:ns ## COG: BMEI0836 COG0372 # Protein_GI_number: 17987119 # Func_class: C Energy production and conversion # Function: Citrate synthase # Organism: Brucella melitensis # 13 435 12 436 437 433 50.0 1e-121 MSVPHKKPEGGPTATLILDGQEYTLPVIAGTTGDRVIDISNLRQLTGGVTTFDPAFANTA SCRSAISWIDGEEGVLTYRGLPIETLAKERVSFVETAWLLIFGHLPTEAQRDDFRNRLTE YSALHRSMNLHFNAFPPNGHPMAIMSSMINAMSTHDRPRITDEESFTDAAAKLMSKVRTI AAASYKASIGEPAIYPRYDLKYVENFMHMMFSLPYRAYEPDPVAARALNLFFVLHADHGQ NCSTSTVRMVGSSGANLFTSCSAGVCALWGDRHGGANVNAVLALQRIRDSGLIPRQYLAK AKDSGERISGFGHRVYRNWDPRARIFRSVVGPLLDTMHKPDPLLDVAMELEEAVLADDYF IERRLYPNVDFYSGIVLRALGIPLNMFTVMFAIGRMAGWIAHWKEVFEDPTTRISRPREL YDGPVSTPWVPRGER >gi|302034492|gb|GL383259.1| GENE 218 230609 - 231577 650 322 aa, chain - ## HITS:1 COG:Cgl1480 KEGG:ns NR:ns ## COG: Cgl1480 COG0667 # Protein_GI_number: 19552730 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Corynebacterium glutamicum # 6 312 2 311 312 219 42.0 4e-57 MRMRTVGASGLKVSAIGLGSLTWGGQTDARKVRSLVRRFVDAGGNLVDTAPAYGGGFAEQ LIGKLTHTDISRDDLVIATKAGFIVEGHKRIVDTSRSALLRDLEGSLRRLHTDHVDLWQV HAWGDAPIEETCAALDHAVTSGMARYVGVSNFVGWQAATAATWQRATGTRTPLVSNQVEY SLLARRAEIEVVPSAQHHGMGLLAWSALGRGVLGGRYRHGTPKDSRGGSDRLSWFVQPYL TRKSNAVVEAIVKAADGLGATVPQIALAWVRDAPVVASALVGPRTTSQLEELLGADEVSL PKEITSALDDITGGPNLAREEA >gi|302034492|gb|GL383259.1| GENE 219 231786 - 232367 275 193 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4474 NR:ns ## KEGG: HMPREF0675_4474 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 193 1 193 193 373 100.0 1e-102 MTRRTFRLERPDRVVVGTVGQPGARVFHLQVREGSRVVTVRCEKVQIDQLALQMDRILDG LAAHVADVFVPPSVDNPDDLAPLDAPLEEEFAVGTMAMAFDDETKRIEIEMYAASDDELM IKDPAMLLTTLPEVAPDSLEILMTTSQARQFVARCRVVVASGRQYCPYCSQQILSAEGHL CPRSNGYRKPLVW >gi|302034492|gb|GL383259.1| GENE 220 232652 - 233164 299 170 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4473 NR:ns ## KEGG: HMPREF0675_4473 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 170 95 264 264 319 100.0 3e-86 MQRWIDDDVESPLVRVDVTERLPPHWHGFPLGVDEDDREIGLAHSPHPALRALALFDAVV NSADRKGGHVLVGPDPDLGGTAHVWAVDNGLTFHTDPKLRTVLWGWAGQPLEPVEEMMLD EVLTIADTDFEDLITPEEIDAVRQRAQGLLEFGAFPGPSGLRPALPWPPM >gi|302034492|gb|GL383259.1| GENE 221 233233 - 233904 542 223 aa, chain + ## HITS:1 COG:Cgl0064 KEGG:ns NR:ns ## COG: Cgl0064 COG3201 # Protein_GI_number: 19551314 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinamide mononucleotide transporter # Organism: Corynebacterium glutamicum # 5 216 4 216 230 222 59.0 4e-58 MSDVLASLLNAQLDVGLGKPILWREVIGNLFGLASALGGARRRLWAWPVGIIGNVILFTV FLGGVFHTPQDLNLWGQAGRQIFFLATSAYGWVVWAATRHNNGASQVAVHPRWATRRERI LALTATVIMLVVFTFALKALGSWGPLSDSWILTGSILATWGMARGWNEFWFVWIAVDVVG VPLLATAQYYPSALMYVFYGAFCLYGFVTWWRAQRAVTDDPCH >gi|302034492|gb|GL383259.1| GENE 222 233971 - 234237 215 88 aa, chain + ## HITS:1 COG:MT2182 KEGG:ns NR:ns ## COG: MT2182 COG0140 # Protein_GI_number: 15841614 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosyl-ATP pyrophosphohydrolase # Organism: Mycobacterium tuberculosis CDC1551 # 3 88 8 93 93 108 67.0 2e-24 MSKTFEELFAELAIKSQTRPAGSGTVEELDRGVHAIGKKIVEEASEVWMAAEHEGNERLA EEISQEIYHLQVMMIKQGLSLDDVYKHL >gi|302034492|gb|GL383259.1| GENE 223 234295 - 235149 766 284 aa, chain + ## HITS:1 COG:Cgl1468 KEGG:ns NR:ns ## COG: Cgl1468 COG0040 # Protein_GI_number: 19552718 # Func_class: E Amino acid transport and metabolism # Function: ATP phosphoribosyltransferase # Organism: Corynebacterium glutamicum # 4 284 1 281 281 296 56.0 4e-80 MSDLLRIAVPNKGALSEAASSLLAEAGYRQRTDHKDLTLVDEENGVEFFYLRPRDIAVYV GEGTLDIGITGRDLLLDSNADATEIKGLGFGHSRFRFAAPKSPQNTIEGLAGKRIATSYP GLLSAFLTERGIDAHLIHLDGAVESSIRLGVADAIADVVETGTTLRRAGLEIFGDVILES EAVLVQRRDFAGSTTFDHFMRRIDGVQVARTYVMVDYDVSAEALDAATALTPGLEAPTVS PLSKDGWYAVRAMVPRTVVQGLMDQLWDAGARAILSTELSACRL >gi|302034492|gb|GL383259.1| GENE 224 235211 - 235828 362 205 aa, chain - ## HITS:1 COG:no KEGG:PPA1416 NR:ns ## KEGG: PPA1416 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 205 1 205 205 359 99.0 4e-98 MWNSGGMSEPTVVAVVTIVLIVLPLLWALSGWFSRRSSRAMLRGVGLALIPVGLVLTGLM RLLVRAIRLVVDWFAGTVMTTTIWIGIIVIAVGLVTWFVSGIMPPVDRETGRQRRQDHAA RKQARGDSQTKGPRSTKTPDHNPTGNNAPTTGTAPSQGASKAQQTPTDAPVATSGPASSP KPTISTADKDEDAELEEILRKRGIE >gi|302034492|gb|GL383259.1| GENE 225 235895 - 236368 233 157 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4468 NR:ns ## KEGG: HMPREF0675_4468 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 157 1 157 157 278 100.0 5e-74 MSVPLSPTGGDMGDADPRARAVLATCLTDDPEVYRQSYLEAVSTLCAGVRLFMPVMADEE GEIGAVKLTNKLGNTALLAFTGIDSLTAWDSRARPVPGRLPDLAATVTEVAADALLIDVA GPAPLVIGTDVLKPIEDGGRLVKLDDGWGWARSGGLG >gi|302034492|gb|GL383259.1| GENE 226 236328 - 236534 130 68 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MMVGDGRAAGGWDDPVSFAGVVLSLRLAPICGDVISCRTMSEAIRAKLVLRKRGPDLPPR RIPFAGLC >gi|302034492|gb|GL383259.1| GENE 227 236557 - 237363 748 268 aa, chain + ## HITS:1 COG:Rv1641 KEGG:ns NR:ns ## COG: Rv1641 COG0290 # Protein_GI_number: 15608779 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation initiation factor 3 (IF-3) # Organism: Mycobacterium tuberculosis H37Rv # 41 238 1 199 201 232 65.0 6e-61 MCVHPTCQVFAHSRGPYFVSGSWRRSYAPRSKRTDIREDPISTEPRINERIRVPEVRLVG PNGEQVGIVRVEQALQLAREQDLDLVEVAPQARPPVVKLMDYGKFKYEAAQKARESRRNQ ANSIIKEMKLRPKIDDHDYETKKGHVLRFLKAGDKVKITIMFRGREQSRPELGVNLLRRL ADDLTEYATVESPPKQEGRNMLMILAPTRKKNQAKADQKAERDRRAAERAEAAEADKAYE AAQRAAAGTAKKKKKKGPADNMDPDIDL >gi|302034492|gb|GL383259.1| GENE 228 237452 - 237670 345 72 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50842894|ref|YP_056121.1| 50S ribosomal protein L35 [Propionibacterium acnes KPA171202] # 5 72 1 68 68 137 100 4e-31 MELSMPKMKSHSGTKKRFKVTGSGKVTARKAGKRHLNEHKSSRVTRRLTGETVLSKGEAA KVKKLLAGHPGR >gi|302034492|gb|GL383259.1| GENE 229 237774 - 238145 609 123 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|213961272|ref|ZP_03389551.1| ribosomal protein L20 [Propionibacterium acnes SK137] # 1 123 1 123 123 239 100 1e-61 MARVKRSVNAKKKRREVLDQASGYRGQRSRLYRKAKEQTLHSATYSFRDRRAKKGDFRSL WIQRINAASRAQGMTYNRFINGLKNAGVEVDRKMLAELAVSDINAFNSLVEVAKASQPQN AAA >gi|302034492|gb|GL383259.1| GENE 230 238147 - 238968 181 273 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 [Bacillus selenitireducens MLS10] # 81 272 51 247 255 74 25 4e-12 MAMTGGPNDDYLGWDRISKGSLRSARRLSSRRGRDESGLFLVEGAQAVREALAWPGKVNL LATSDPARDAEHVEVATCRGVRVVVLTDEDVNALSDTVTSQGIFAVCRQVTRRELPDEAV RLAVICAQVRDPGNAGTVIRCADAFGADCVILTRGSVDPHNPKTVRSSVGSIFHLPVVVG VELADAVEWAHQHQMSVLAADGGGHSLDVVARSGCLKRPIAWLMGNEAWGLPEADRALAD EIVGVPMWGAAESLNLSTAAAVVLYATASEQRA >gi|302034492|gb|GL383259.1| GENE 231 238907 - 239092 59 61 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGLPPDGLTLDNARVPDTRVRLMDISLVASTPSTMAGRPTLFRLAVHLLWRTALLRLRLR G >gi|302034492|gb|GL383259.1| GENE 232 239091 - 240200 897 369 aa, chain + ## HITS:1 COG:MT1687 KEGG:ns NR:ns ## COG: MT1687 COG0016 # Protein_GI_number: 15841105 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase alpha subunit # Organism: Mycobacterium tuberculosis CDC1551 # 16 368 2 341 341 353 53.0 2e-97 MSGPNTNYDPVQVSALDADQVEARVAEALEAIARASTTAELKQVRITHTGDRSALALANR EIGALPPAARKDAGKRIGQARGRVNQALKARQQELAEAELEARLAAETTDVTLPVVTSPQ GAPHPITALIDNVCDVFTAMGWEVAEGPEAESEWFNFDALNLGTDHPARALQDTLWLDPV DDGKCMRTATSPVQIHTLLKQQPPVRIISPGKVFRADEYDATHLPVFHQVEGLCVDKGIT MGHLKGTVDAFARAMFGAVRTRFRPHYFPFTEPSAEVDLECFVCHGASVGNPDRPCRTCR SEGWIEWGGCGVVNPRVLIACGIDTDVYSGFAFGMGIDRTVMFRNNAPDLRDFVEGDVRF SRSLRGGAR >gi|302034492|gb|GL383259.1| GENE 233 240197 - 240772 692 191 aa, chain + ## HITS:1 COG:MT1688_1 KEGG:ns NR:ns ## COG: MT1688_1 COG0073 # Protein_GI_number: 15841106 # Func_class: R General function prediction only # Function: EMAP domain # Organism: Mycobacterium tuberculosis CDC1551 # 1 181 1 164 164 95 38.0 5e-20 MKVPMSWLQAMVNLPDGTTTDKVAKALTNHTATVEKVEVVGGELTGPIVIGHILSSVPEP QKNGKVINWCRVDVGPRYNAEGHPKNIEEGVEGRGIICGAPNAVEGAWVVVSLPGAVLPG GFAISARKTYGHMSDGMLCASDELGIGVDDAGIITLPPSVEGHQLVPGEDALPILGVPEE VLDVDVTPDIG >gi|302034492|gb|GL383259.1| GENE 234 240782 - 242716 1291 644 aa, chain + ## HITS:1 COG:Cgl1357_2 KEGG:ns NR:ns ## COG: Cgl1357_2 COG0072 # Protein_GI_number: 19552607 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase beta subunit # Organism: Corynebacterium glutamicum # 2 643 23 672 673 451 43.0 1e-126 MRGIAREVAHAMSVHFRDPYDEEPIGPVLGPVAVDVQSDACSQFIALPVSGMNLGAPTPR FITDRITRAGMRPINLVVDVTNYVMLESGQPLHAYDADNVSGTIVVRKAHEGEHLLTLDD TDRTLDPDDLVIADDSGAIGLAGVMGGAATEVTAETTSIILEGAHFDPMTVARAYRRHKL GSEASRRFERGVDPICAHTAAVRAAELLAQYGGATVGEPTVVGEVPEMPRQTINADLPNR ILGTKVPTEEVIEILTRSGVKVTALGDSLHLVAPTWRPDLVDAYDYVEEIGRKIGFDRIK AVLPPSLGASGLTKAQRGRRRVLRSVVEAGFVELITLPFIGDKDLDVLGISGDDTRHATV KLANPLDDTRPYLRTTLLPGLFHAVTTNMSRSQDDLAVFESGTVFRAVTPAAAPRPGVDE RPSDEVLAEIDAALPAQPRMLAAVICGSWLPDRWDGESVKADWRHAVLVAQKAADALGVR LVRKADRQAPWHPGRCAALIVDGKVIGHAGELHPTVVSKAGLPQRTCAVEFNLDALVAAA PRGGEVMAISSFPVAKEDVALVVDKSVAAEDVRQALIEGAGPLLESVELFDVYEGEQVGD NRKSLAFNLRLRGADRTLTDSEALETRDAAVARAEETCGAQLRS >gi|302034492|gb|GL383259.1| GENE 235 242958 - 244460 832 500 aa, chain - ## HITS:1 COG:BH1748 KEGG:ns NR:ns ## COG: BH1748 COG0502 # Protein_GI_number: 15614311 # Func_class: H Coenzyme transport and metabolism # Function: Biotin synthase and related enzymes # Organism: Bacillus halodurans # 138 463 1 324 333 295 42.0 2e-79 MSKESSPKTSRPFVNSVGKFGVLRWHRRWASVNRKNFVAYRSKQALLISNVPVQRSRLHS KTLSQTSHGQVSEPVRVENLYSCPNNVRLRQAHDDSLDDDTISGGSPHWCCLMDYIESRS ILNGVQDVSSLGRTRVLLNLADMTERGLRGESITREEALEILRSSDDELMSIIAAAGKVR RHFFDNRVRLNYLVNLKSGLCPEDCSYCSQRLGSRAEITKYSWADPQKVHDAVEAGIAGG ARRVCMVASGHGPSRRDVERVNGMVRSLKADHPDVEVCVCLGFVDDEKAASIKEAGADAY NHNANTARSHYGKICSTHSYEDRMDTVEVLKRNGLSPCSGVIAGMGETDEEFVDVIFDLR KHGVDSVPVNFLLPFEGTPLAGGAQHITPQWCLKRLAMVRFAHPDSEVRAAAGREQHIRT MQPLALEVVNSIFLGDYLTSEGAAGAADLQMIEDGGFIPEGADGQPMVHTDVNSHHSANL PVNAVPIRHRGIGTEVPANA >gi|302034492|gb|GL383259.1| GENE 236 244137 - 244748 476 203 aa, chain + ## HITS:1 COG:Cgl2053 KEGG:ns NR:ns ## COG: Cgl2053 COG1309 # Protein_GI_number: 19553303 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Corynebacterium glutamicum # 15 202 4 187 191 89 31.0 4e-18 MWTTPGNGVVVKGVIVSLTKPDVVRAGVEILDAYGLGDLSMRRLAERLGVKAGALYWHVA NKQSLLAAVSDEILAVDGGPTTVPSQDAELSDGVDEWARCFRATLLAHRDGAELVASTIS VGLGKTDPTVKLRQFMECQGVCRERADSVCRALVHLVLGHTMEEQTRTQLHDLGVVGKID PARQDDDFDLALAIFVAGLVSLL >gi|302034492|gb|GL383259.1| GENE 237 244844 - 245392 312 182 aa, chain + ## HITS:1 COG:MT1695 KEGG:ns NR:ns ## COG: MT1695 COG1438 # Protein_GI_number: 15841113 # Func_class: K Transcription # Function: Arginine repressor # Organism: Mycobacterium tuberculosis CDC1551 # 1 164 1 170 201 101 41.0 7e-22 MSEGQCAPTSRTARHARIRALIEEGRISSQAELGEILASEGFVASQGTLSRDLVEIGAVR GRDHAGNPCYSIPEGEHPSDVTTGSPAWVKLARMTKELCTGVRNNEYLVVLKTPPGAAQY YGSAIDKAGLDIVLGTIAGDDTIALICAIGVDAGELADAFSQMAVTGVPAEILSRSVREE FA >gi|302034492|gb|GL383259.1| GENE 238 245476 - 246732 676 418 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 [Phaeobacter gallaeciensis BS107] # 2 414 7 407 418 265 36 2e-69 MSDLLDDLEWRGLVADSTDREALEAHLAQGPVTFYVGFDPTAKSLHIGHLVQLMLVRALQ ERGHKPLLLVGGATGLIGDPKMTGERHMNDREVVAEWVESIKDQVSKYVDTDGRNTAQIV NNYDWTVKYTALDLLRDVGKHFSVNRMLARDVVARRLESGISYTEFSYVLLQSLDFYELH KRYGCTLQTGAQDQWGNITAGAEFIRKTTGDVVHGLVTPLITKADGTKYGKTESGTVWVD PELTSAYAFHQFFLNAEDSKVIEYLKIFSPRSREEIEDLARKTEEEPWRRAAQHCLADDL TDLVHGVEQRKAAEAAAQAIFGRGELRDLDERTVLSLSDELGAAHHEGGEYPTVVGAMVA AGVVDTKSAGRRAVAEGGAYLNNVKVADPDQRLTDDDFLCGRVALVRRGKKTVGALTR Prediction of potential genes in microbial genomes Time: Thu Jul 21 05:51:17 2011 Seq name: gi|302034491|gb|GL383260.1| Propionibacterium acnes HL025PA2 genomic scaffold Scfld13, whole genome shotgun sequence Length of sequence - 183025 bp Number of predicted genes - 195, with homology - 187 Number of transcription units - 116, operones - 40 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 287 76 ## + Prom 39 - 98 1.7 2 2 Tu 1 . + CDS 139 - 534 368 ## HMPREF0675_4965 hypothetical protein + Prom 724 - 783 2.1 3 3 Tu 1 . + CDS 898 - 1851 669 ## COG2971 Predicted N-acetylglucosamine kinase - Term 1857 - 1910 8.3 4 4 Op 1 2/0.000 - CDS 1929 - 2603 515 ## COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain 5 4 Op 2 . - CDS 2606 - 3868 961 ## COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase + Prom 3902 - 3961 2.6 6 5 Op 1 11/0.000 + CDS 4004 - 4567 680 ## COG0450 Peroxiredoxin + Prom 4581 - 4640 1.6 7 5 Op 2 . + CDS 4665 - 5372 577 ## COG3634 Alkyl hydroperoxide reductase, large subunit 8 5 Op 3 1/0.038 + CDS 5440 - 6282 334 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 9 5 Op 4 . + CDS 6289 - 7233 400 ## COG0583 Transcriptional regulator + Term 7483 - 7521 -0.7 10 6 Op 1 1/0.038 - CDS 7267 - 8700 1328 ## COG0015 Adenylosuccinate lyase 11 6 Op 2 . - CDS 8697 - 10016 818 ## COG0151 Phosphoribosylamine-glycine ligase 12 6 Op 3 . - CDS 10075 - 11361 1117 ## COG0104 Adenylosuccinate synthase 13 7 Tu 1 . - CDS 11529 - 12488 457 ## PPA1995 hypothetical protein 14 8 Tu 1 . + CDS 12570 - 13292 580 ## COG2186 Transcriptional regulators - Term 13307 - 13338 -0.6 15 9 Op 1 3/0.000 - CDS 13417 - 14106 611 ## COG3010 Putative N-acetylmannosamine-6-phosphate epimerase 16 9 Op 2 . - CDS 14139 - 15059 953 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase 17 9 Op 3 . - CDS 15107 - 16009 571 ## HMPREF0675_5064 hypothetical protein 18 9 Op 4 . - CDS 16034 - 17638 1367 ## COG0477 Permeases of the major facilitator superfamily - Prom 17700 - 17759 1.9 19 10 Tu 1 . - CDS 17766 - 18293 369 ## HMPREF0675_5066 hypothetical protein 20 11 Tu 1 . + CDS 18292 - 18558 169 ## HMPREF0675_5067 hypothetical protein + Term 18641 - 18669 2.1 21 12 Tu 1 . + CDS 18691 - 20553 2046 ## COG1217 Predicted membrane GTPase involved in stress response 22 13 Tu 1 . + CDS 20730 - 21266 476 ## PPA2004 hypothetical protein + Term 21370 - 21416 7.1 - Term 21324 - 21366 1.8 23 14 Op 1 . - CDS 21423 - 21785 394 ## COG1038 Pyruvate carboxylase 24 14 Op 2 . - CDS 21801 - 22043 299 ## HMPREF0675_5071 hypothetical protein 25 14 Op 3 . - CDS 22070 - 23644 1639 ## COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) 26 14 Op 4 . - CDS 23660 - 25153 1425 ## COG5016 Pyruvate/oxaloacetate carboxyltransferase 27 15 Tu 1 . - CDS 25474 - 26832 1029 ## COG2202 FOG: PAS/PAC domain 28 16 Tu 1 . + CDS 27340 - 27585 122 ## PPA2010 hypothetical protein + Term 27831 - 27873 3.4 - Term 27583 - 27628 9.5 29 17 Op 1 . - CDS 27645 - 28670 1174 ## COG0191 Fructose/tagatose bisphosphate aldolase - Prom 28703 - 28762 1.8 30 17 Op 2 . - CDS 28781 - 29371 325 ## PPA2012 hypothetical protein 31 17 Op 3 . - CDS 29405 - 29995 434 ## COG0566 rRNA methylases 32 18 Tu 1 . + CDS 30109 - 30837 171 ## PROTEIN SUPPORTED gi|154175107|ref|YP_001408238.1| ribosomal protein L22 - Term 30800 - 30848 0.6 33 19 Tu 1 . - CDS 30875 - 31420 338 ## PPA2015 hypothetical protein 34 20 Op 1 . - CDS 31523 - 32326 520 ## COG0421 Spermidine synthase 35 20 Op 2 . - CDS 32323 - 33363 704 ## COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components 36 21 Op 1 . + CDS 33480 - 33857 185 ## PROTEIN SUPPORTED gi|90021194|ref|YP_527021.1| ribosomal protein L20 37 21 Op 2 . + CDS 33793 - 34089 119 ## gi|289425758|ref|ZP_06427513.1| hypothetical protein HMPREF1034_1447 38 22 Op 1 . - CDS 34043 - 34225 198 ## HMPREF0675_5085 transporter, major facilitator family protein 39 22 Op 2 3/0.000 - CDS 34128 - 35555 1238 ## COG0477 Permeases of the major facilitator superfamily - Term 35616 - 35669 9.1 40 22 Op 3 . - CDS 35706 - 38291 1779 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 41 22 Op 4 . - CDS 38368 - 38598 75 ## gi|313808307|gb|EFS46778.1| conserved domain protein 42 23 Tu 1 . + CDS 38569 - 39927 1016 ## COG1114 Branched-chain amino acid permeases 43 24 Tu 1 . - CDS 39934 - 40680 567 ## COG0561 Predicted hydrolases of the HAD superfamily - Term 40710 - 40749 6.3 44 25 Op 1 . - CDS 40762 - 41670 947 ## COG3588 Fructose-1,6-bisphosphate aldolase 45 25 Op 2 . - CDS 41736 - 42305 415 ## COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 46 25 Op 3 . - CDS 42302 - 43489 834 ## COG1914 Mn2+ and Fe2+ transporters of the NRAMP family 47 26 Op 1 19/0.000 + CDS 43726 - 44925 793 ## COG4585 Signal transduction histidine kinase 48 26 Op 2 . + CDS 44956 - 45630 722 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 49 27 Op 1 36/0.000 + CDS 45775 - 46509 276 ## PROTEIN SUPPORTED gi|225084369|ref|YP_002657150.1| ribosomal protein S16 50 27 Op 2 . + CDS 46506 - 48929 1718 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 51 28 Tu 1 . - CDS 48965 - 49345 411 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 52 29 Tu 1 . + CDS 49501 - 50859 1342 ## COG1113 Gamma-aminobutyrate permease and related permeases 53 30 Tu 1 . - CDS 50902 - 52479 1254 ## COG2985 Predicted permease - Prom 52561 - 52620 2.4 54 31 Tu 1 . - CDS 52679 - 53722 879 ## COG1062 Zn-dependent alcohol dehydrogenases, class III 55 32 Tu 1 . - CDS 53826 - 54734 642 ## HMPREF0675_5101 GDSL-like protein 56 33 Op 1 4/0.000 - CDS 54838 - 55299 396 ## COG0789 Predicted transcriptional regulators 57 33 Op 2 5/0.000 - CDS 55301 - 56443 867 ## COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain 58 33 Op 3 29/0.000 - CDS 56517 - 57182 699 ## COG0576 Molecular chaperone GrpE (heat shock protein) 59 33 Op 4 . - CDS 57267 - 59120 1930 ## COG0443 Molecular chaperone - Prom 59177 - 59236 1.9 - Term 59328 - 59363 8.1 60 34 Op 1 . - CDS 59380 - 59613 311 ## HMPREF0675_5106 hypothetical protein 61 34 Op 2 . - CDS 59610 - 60755 947 ## COG0306 Phosphate/sulphate permeases - Term 60959 - 60998 3.0 62 35 Tu 1 . - CDS 61060 - 61185 74 ## gi|313771713|gb|EFS37679.1| hypothetical protein HMPREF9574_01917 63 36 Tu 1 . + CDS 61179 - 61910 735 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 64 37 Tu 1 . - CDS 62062 - 62289 136 ## - Prom 62442 - 62501 2.8 + Prom 62252 - 62311 1.6 65 38 Op 1 . + CDS 62349 - 62717 67 ## gi|327335203|gb|EGE76913.1| hypothetical protein HMPREF9344_00065 66 38 Op 2 . + CDS 62650 - 63324 654 ## COG0274 Deoxyribose-phosphate aldolase + Term 63548 - 63600 4.0 67 39 Tu 1 . - CDS 63348 - 64076 664 ## HMPREF0675_5111 hypothetical protein 68 40 Tu 1 . - CDS 64223 - 65398 814 ## HMPREF0675_5112 FHA domain protein - Prom 65425 - 65484 2.5 69 41 Tu 1 . - CDS 65571 - 68222 2638 ## COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase - Term 68491 - 68525 -0.1 70 42 Op 1 . - CDS 68561 - 69445 681 ## COG1806 Uncharacterized protein conserved in bacteria 71 42 Op 2 . - CDS 69477 - 69788 92 ## + Prom 69501 - 69560 1.7 72 43 Op 1 . + CDS 69622 - 70626 803 ## COG2813 16S RNA G1207 methylase RsmC 73 43 Op 2 . + CDS 70706 - 71563 692 ## COG0560 Phosphoserine phosphatase 74 43 Op 3 . + CDS 71581 - 72375 435 ## COG0676 Uncharacterized enzymes related to aldose 1-epimerase 75 43 Op 4 . + CDS 72653 - 74167 1574 ## COG0427 Acetyl-CoA hydrolase + Term 74195 - 74239 14.4 - Term 74308 - 74341 1.1 76 44 Tu 1 . - CDS 74382 - 74789 204 ## COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases - Term 74853 - 74888 1.6 77 45 Op 1 . - CDS 75027 - 75344 181 ## COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 78 45 Op 2 . - CDS 75396 - 75782 311 ## PPA2054 amidase - Prom 75839 - 75898 4.3 79 46 Op 1 . + CDS 75687 - 75887 115 ## 80 46 Op 2 . + CDS 75957 - 76568 259 ## HMPREF0675_5121 hypothetical protein + TRNA 76630 - 76703 86.8 # Gly CCC 0 0 81 47 Tu 1 . - CDS 76695 - 76895 121 ## PPA2072 hypothetical protein 82 48 Op 1 . - CDS 77006 - 77395 272 ## COG4113 Predicted nucleic acid-binding protein, contains PIN domain 83 48 Op 2 . - CDS 77392 - 77619 130 ## HMPREF0675_5125 hypothetical protein - Prom 77772 - 77831 2.7 84 49 Tu 1 . + CDS 77649 - 77813 122 ## HMPREF0675_5126 hypothetical protein 85 50 Tu 1 . - CDS 78064 - 79182 670 ## COG1957 Inosine-uridine nucleoside N-ribohydrolase 86 51 Tu 1 . + CDS 79141 - 79356 93 ## HMPREF0675_5128 hypothetical protein 87 52 Tu 1 . + CDS 79481 - 79897 356 ## HMPREF0675_5129 hypothetical protein - Term 79691 - 79741 -0.6 88 53 Tu 1 . - CDS 79894 - 80055 75 ## HMPREF0675_5130 hypothetical protein 89 54 Tu 1 . + CDS 80264 - 80740 504 ## COG0662 Mannose-6-phosphate isomerase - Term 80735 - 80807 31.4 90 55 Op 1 . - CDS 81052 - 81696 518 ## HMPREF0675_5132 transcriptional regulator, TetR family 91 55 Op 2 35/0.000 - CDS 81693 - 83486 186 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 92 55 Op 3 35/0.000 - CDS 83483 - 84331 216 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 93 55 Op 4 . - CDS 84377 - 85303 965 ## COG1132 ABC-type multidrug transport system, ATPase and permease components 94 55 Op 5 . - CDS 85300 - 85488 207 ## gi|332676463|gb|AEE73279.1| hypothetical protein PAZ_c21560 - Prom 85566 - 85625 6.0 + Prom 85518 - 85577 4.9 95 56 Tu 1 . + CDS 85798 - 86481 648 ## HMPREF0675_5136 hypothetical protein 96 57 Op 1 . - CDS 86512 - 87783 728 ## COG2966 Uncharacterized conserved protein 97 57 Op 2 . - CDS 87862 - 88566 385 ## HMPREF0675_5139 hypothetical protein 98 57 Op 3 . - CDS 88563 - 89915 506 ## HMPREF0675_5140 hypothetical protein 99 57 Op 4 . - CDS 89915 - 90649 270 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 100 57 Op 5 . - CDS 90650 - 91027 217 ## HMPREF0675_5142 hypothetical protein - Prom 91095 - 91154 2.5 + Prom 90710 - 90769 2.9 101 58 Tu 1 . + CDS 91014 - 91232 57 ## gi|315109556|gb|EFT81532.1| hypothetical protein HMPREF9602_02338 102 59 Op 1 24/0.000 - CDS 91273 - 92682 1041 ## COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes 103 59 Op 2 28/0.000 - CDS 92715 - 93719 741 ## COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit 104 59 Op 3 . - CDS 93719 - 94864 863 ## COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit - Prom 94890 - 94949 1.9 105 60 Op 1 . + CDS 95053 - 96423 764 ## COG1232 Protoporphyrinogen oxidase 106 60 Op 2 . + CDS 96423 - 97703 810 ## COG0535 Predicted Fe-S oxidoreductases + Prom 97865 - 97924 1.5 107 61 Op 1 . + CDS 97973 - 99055 1016 ## COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases 108 61 Op 2 . + CDS 99089 - 99424 171 ## HMPREF0675_5150 hypothetical protein 109 61 Op 3 . + CDS 99298 - 99735 340 ## COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases 110 61 Op 4 . + CDS 99747 - 100082 305 ## PPA2097 5'-nucleotidase/2',3'-cyclic phosphodiesterase or related esterase + Term 100115 - 100155 7.4 111 62 Op 1 . - CDS 100014 - 100250 84 ## gi|314981588|gb|EFT25681.1| hypothetical protein HMPREF9577_01630 112 62 Op 2 . - CDS 100296 - 100541 196 ## COG1132 ABC-type multidrug transport system, ATPase and permease components - Term 100734 - 100776 -0.5 113 63 Tu 1 . - CDS 100788 - 101063 121 ## HMPREF0675_5153 hypothetical protein 114 64 Tu 1 . + CDS 101081 - 101293 93 ## gi|313763741|gb|EFS35105.1| hypothetical protein HMPREF9567_01930 115 65 Tu 1 . - CDS 101340 - 101543 232 ## HMPREF0675_5155 hypothetical protein 116 66 Tu 1 . + CDS 101731 - 101919 62 ## gi|327448553|gb|EGE95207.1| hypothetical protein HMPREF9570_00111 117 67 Op 1 . + CDS 102383 - 102745 277 ## COG0346 Lactoylglutathione lyase and related lyases 118 67 Op 2 . + CDS 102794 - 103102 214 ## COG2801 Transposase and inactivated derivatives 119 68 Tu 1 . - CDS 103280 - 104299 847 ## COG1075 Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold + Prom 104663 - 104722 4.4 120 69 Tu 1 . + CDS 104893 - 106395 970 ## HMPREF0675_5160 cellulase (glycosyl hydrolase family 5) + Term 106446 - 106490 12.0 - Term 106082 - 106108 1.0 121 70 Tu 1 . - CDS 106267 - 106524 99 ## 122 71 Tu 1 . - CDS 106763 - 107200 300 ## HMPREF0675_5161 hypothetical protein 123 72 Tu 1 . + CDS 107470 - 108285 912 ## HMPREF0675_5162 CAMP factor (Cfa) + Term 108312 - 108359 7.2 124 73 Tu 1 . - CDS 108442 - 108735 179 ## PPA2109 hypothetical protein - Prom 108800 - 108859 2.6 125 74 Op 1 . + CDS 108977 - 109468 389 ## COG0394 Protein-tyrosine-phosphatase 126 74 Op 2 . + CDS 109532 - 110626 967 ## HMPREF0675_5165 hypothetical protein 127 74 Op 3 40/0.000 + CDS 110623 - 111321 550 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 128 74 Op 4 . + CDS 111378 - 112748 734 ## COG0642 Signal transduction histidine kinase 129 75 Op 1 . + CDS 112850 - 113362 203 ## COG1446 Asparaginase 130 75 Op 2 . + CDS 113263 - 113814 246 ## COG1446 Asparaginase 131 76 Tu 1 . - CDS 113821 - 114420 357 ## COG1443 Isopentenyldiphosphate isomerase 132 77 Tu 1 . + CDS 114554 - 115747 490 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain + Prom 115763 - 115822 2.5 133 78 Tu 1 . + CDS 115961 - 116239 351 ## HMPREF0675_5173 hypothetical protein 134 79 Tu 1 . + CDS 116367 - 117392 614 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family 135 80 Tu 1 . - CDS 117527 - 117712 109 ## gi|314924364|gb|EFS88195.1| hypothetical protein HMPREF9603_00143 136 81 Tu 1 . + CDS 117699 - 118931 1085 ## COG0477 Permeases of the major facilitator superfamily + Prom 119021 - 119080 2.9 137 82 Op 1 . + CDS 119233 - 119424 76 ## 138 82 Op 2 24/0.000 + CDS 119381 - 121951 2237 ## COG0209 Ribonucleotide reductase, alpha subunit 139 82 Op 3 . + CDS 121986 - 122972 992 ## COG0208 Ribonucleotide reductase, beta subunit + Term 123047 - 123100 17.0 140 83 Tu 1 . + CDS 124009 - 124824 751 ## COG1940 Transcriptional regulator/sugar kinase 141 84 Tu 1 . + CDS 124998 - 125609 419 ## HMPREF0675_5183 hypothetical protein + Term 125728 - 125759 0.6 142 85 Tu 1 . - CDS 125660 - 125782 204 ## PROTEIN SUPPORTED gi|213961087|ref|ZP_03389367.1| ribosomal protein L36 - Prom 125802 - 125861 1.7 + Prom 126546 - 126605 3.0 143 86 Tu 1 . + CDS 126796 - 128070 837 ## HMPREF0675_5187 hypothetical protein + Term 128115 - 128168 19.0 - Term 128107 - 128151 9.1 144 87 Tu 1 . - CDS 128313 - 129983 1674 ## COG0018 Arginyl-tRNA synthetase 145 88 Tu 1 . + CDS 130118 - 130939 787 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase + Term 130963 - 131010 12.1 146 89 Tu 1 . - CDS 131006 - 131626 366 ## COG2949 Uncharacterized membrane protein - Prom 131791 - 131850 2.7 - Term 131944 - 131983 -0.4 147 90 Tu 1 . - CDS 132176 - 133858 1571 ## COG0166 Glucose-6-phosphate isomerase 148 91 Tu 1 . + CDS 133845 - 135023 604 ## HMPREF0675_5193 hypothetical protein - Term 135014 - 135042 -0.1 149 92 Tu 1 . - CDS 135065 - 135730 693 ## HMPREF0675_5194 hypothetical protein 150 93 Op 1 . + CDS 135651 - 135914 113 ## gi|315079328|gb|EFT51329.1| hypothetical protein HMPREF9565_00447 151 93 Op 2 . + CDS 135899 - 136429 616 ## COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) 152 94 Tu 1 . + CDS 136585 - 139176 2104 ## COG4581 Superfamily II RNA helicase 153 95 Op 1 12/0.000 - CDS 139191 - 139541 164 ## COG0602 Organic radical activating enzymes 154 95 Op 2 . - CDS 139703 - 142045 1803 ## COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase 155 96 Tu 1 . + CDS 142501 - 142962 512 ## COG1881 Phospholipid-binding protein + Term 143009 - 143053 2.1 156 97 Op 1 . + CDS 143258 - 143620 124 ## PPA2139 putative serine esterase cutinase 157 97 Op 2 . + CDS 143503 - 144258 667 ## HMPREF0675_5201 cutinase 158 98 Tu 1 . - CDS 144264 - 144962 424 ## PPA2140 hypothetical protein - Prom 145128 - 145187 80.3 + TRNA 145102 - 145187 62.8 # Leu CAG 0 0 159 99 Tu 1 . + CDS 145485 - 146057 727 ## HMPREF0675_5204 hypothetical protein + Term 146127 - 146163 9.0 - Term 145958 - 145985 -0.1 160 100 Tu 1 . - CDS 146106 - 146258 67 ## 161 101 Tu 1 . + CDS 146336 - 146506 227 ## PPA2142 putative lysophospholipase 162 102 Tu 1 . - CDS 146636 - 146809 82 ## gi|313802968|gb|EFS44179.1| conserved domain protein 163 103 Tu 1 . + CDS 146756 - 147457 760 ## COG2267 Lysophospholipase + Term 147477 - 147533 2.5 + Prom 147478 - 147537 1.6 164 104 Op 1 . + CDS 147647 - 149140 996 ## COG0726 Predicted xylanase/chitin deacetylase 165 104 Op 2 . + CDS 149137 - 149997 599 ## HMPREF0675_5208 hypothetical protein 166 104 Op 3 . + CDS 149994 - 150917 754 ## COG0701 Predicted permeases + Term 151019 - 151047 -0.2 167 105 Tu 1 . + CDS 151074 - 152630 959 ## COG0726 Predicted xylanase/chitin deacetylase 168 106 Op 1 . - CDS 152665 - 154491 1463 ## COG0728 Uncharacterized membrane protein, putative virulence factor 169 106 Op 2 . - CDS 154499 - 155773 1147 ## COG0527 Aspartokinases 170 107 Op 1 . + CDS 155667 - 155864 73 ## 171 107 Op 2 2/0.000 + CDS 155961 - 158483 2096 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) 172 107 Op 3 . + CDS 158413 - 159399 688 ## COG1408 Predicted phosphohydrolases + Term 159503 - 159570 31.8 + TRNA 159479 - 159555 90.8 # Pro CGG 0 0 + Prom 159481 - 159540 79.0 173 108 Op 1 . + CDS 159767 - 160306 598 ## COG0693 Putative intracellular protease/amidase + Term 160328 - 160367 7.3 + Prom 160423 - 160482 4.9 174 108 Op 2 21/0.000 + CDS 160606 - 162273 1665 ## COG4166 ABC-type oligopeptide transport system, periplasmic component 175 108 Op 3 49/0.000 + CDS 162346 - 163269 843 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 176 108 Op 4 44/0.000 + CDS 163262 - 164233 728 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 177 108 Op 5 44/0.000 + CDS 164243 - 165280 551 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 178 108 Op 6 . + CDS 165270 - 166331 909 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 - Term 166352 - 166388 5.4 179 109 Tu 1 . - CDS 166559 - 166804 429 ## PROTEIN SUPPORTED gi|50843595|ref|YP_056822.1| 50S ribosomal protein L31 type B - Prom 166847 - 166906 3.0 + Prom 166811 - 166870 3.4 180 110 Op 1 16/0.000 + CDS 166901 - 167137 412 ## PROTEIN SUPPORTED gi|50843596|ref|YP_056823.1| 50S ribosomal protein L28 181 110 Op 2 3/0.000 + CDS 167137 - 167307 286 ## PROTEIN SUPPORTED gi|50843597|ref|YP_056824.1| 50S ribosomal protein L33 182 110 Op 3 . + CDS 167307 - 167612 508 ## PROTEIN SUPPORTED gi|50843598|ref|YP_056825.1| 30S ribosomal protein S14 183 110 Op 4 . + CDS 167548 - 167787 286 ## PROTEIN SUPPORTED gi|50843599|ref|YP_056826.1| 50S ribosomal protein L32 184 111 Tu 1 . + CDS 167987 - 168229 126 ## COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 - Term 168094 - 168140 1.9 185 112 Tu 1 . - CDS 168242 - 170131 1359 ## COG1472 Beta-glucosidase-related glycosidases - Prom 170266 - 170325 1.7 186 113 Op 1 . + CDS 170371 - 172377 1903 ## COG2987 Urocanate hydratase 187 113 Op 2 . + CDS 172377 - 173573 716 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 188 113 Op 3 . + CDS 173570 - 174910 761 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases 189 113 Op 4 6/0.000 + CDS 174907 - 176097 712 ## COG1228 Imidazolonepropionase and related amidohydrolases 190 113 Op 5 . + CDS 176233 - 177768 1300 ## COG2986 Histidine ammonia-lyase + Term 177972 - 178021 2.4 + Prom 177885 - 177944 80.3 191 114 Tu 1 . + CDS 178152 - 178388 169 ## HMPREF0675_5235 hypothetical protein - Term 178651 - 178679 -0.0 192 115 Op 1 . - CDS 178842 - 179576 389 ## COG0846 NAD-dependent protein deacetylases, SIR2 family 193 115 Op 2 . - CDS 179579 - 180292 661 ## HMPREF0675_5237 hypothetical protein 194 115 Op 3 . - CDS 180372 - 181619 815 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) + Prom 181834 - 181893 4.2 195 116 Tu 1 . + CDS 181933 - 182964 899 ## COG0797 Lipoproteins Predicted protein(s) >gi|302034491|gb|GL383260.1| GENE 1 2 - 287 76 95 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEPMSTPARLDMTAVMALTLRFCFVTLSRETAAFSHSPVSHPTAGKINDMNNLGELSLLS APANIEDTWYPKIASAQTAPTMVPVVRPLRGAWRY >gi|302034491|gb|GL383260.1| GENE 2 139 - 534 368 131 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4965 NR:ns ## KEGG: HMPREF0675_4965 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 130 68 197 198 163 68.0 3e-39 MSFIFPAVGWLTGLWEKAAVSRDNVTKQKRRVKAITAVMSSLAGVLMGSMEYFLTSLRFA SSKEKLIHYLILIVVFSLTGWILGTIGTIIKDDGHRFLIKMSIATAVALFTSVAVWFFVF SFIRVAFFFEF >gi|302034491|gb|GL383260.1| GENE 3 898 - 1851 669 317 aa, chain + ## HITS:1 COG:alr4655 KEGG:ns NR:ns ## COG: alr4655 COG2971 # Protein_GI_number: 17232147 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted N-acetylglucosamine kinase # Organism: Nostoc sp. PCC 7120 # 87 242 96 251 320 83 34.0 4e-16 MNDAVCSDSSPVLAVDAGQSSTRVRCEPGPWGPGWIVTSSGVRTALPLAQQFATIMHDVA TAHPEITQSECTVAIGSSGARDDEDPIPVLHALKPFGVSRVLLAHDSITSYLGALGDQLG VVTASGTGVITLAVGRHNVARVDGWGYIIGDAGSAFWLGRHGLDAVMRAHDGRGEPTVLS HTIGNDFDDIEAAYLELHADPLMVSRIAAYSATVTAAAEEGDHVSRDICVRAAHELAHST VTGLRQTELTDADSPAVGLLGGVMKSQLIHTAITREISAAMPGARIVEPLGEGLDGAAAL PTVSPESPLGQRIHVAQ >gi|302034491|gb|GL383260.1| GENE 4 1929 - 2603 515 224 aa, chain - ## HITS:1 COG:Cgl2535 KEGG:ns NR:ns ## COG: Cgl2535 COG0047 # Protein_GI_number: 19553785 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain # Organism: Corynebacterium glutamicum # 3 222 4 223 223 254 60.0 9e-68 MVRIGVVTFPGTLDDQDAARAVRLAGAEPVSLWYASTDLAGVDAVILPGGFSYGDYLRAG ALAAASPVMSSIRRAVDGGLPVLGICNGFQVLCESHLLPGTLMRNEKRRFHCSVQQLQVA SVDTVWTCDFRPSERIHIAAKHGEGNYVADAATVAALEANNRVVFRYTANPNGSVHDIAG ITNEAGNVVGLMPHPEHSVEELTGAGTDGLGFFRSLMTFLSAQL >gi|302034491|gb|GL383260.1| GENE 5 2606 - 3868 961 420 aa, chain - ## HITS:1 COG:Cgl2543 KEGG:ns NR:ns ## COG: Cgl2543 COG0152 # Protein_GI_number: 19553793 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase # Organism: Corynebacterium glutamicum # 11 285 11 286 297 283 53.0 3e-76 MVTSHLNLPLLAEGKVRRLYRLPDQPGRLLMVATDRISAYDHVLTPDVPGKGAILTNMSL WWFDQLADIVDNHLVSVDVPAEVAGRAMVVEELDMFPVECVVRGYLTGSGWAEYQRNQAV CGIRLPEGLQNGSRLEEPIFTPAIKAPQGEHDENIDYLRLVELVGPDVAAQLHDLSLRVY QRAEEIARKRGILLADTKFEFGRRVDGTIVLADEVLTPDSSRFWDAETWQPGKGADSFDK QYVRDWLTNESGWDRASDQEPPALPEEVVKATSRRYEEAWARLTGGHVSDEVSDETPHNE ADDDKHARASRDSVSGESGDAAPVALDVPGESESCSADKIGAMSRVVVEVMPKPEILDPQ GKAITSVLARLGHDGLTVRQGKRFEITGEGLEDRLDEIRQVASELLANTVIESFDVHVED >gi|302034491|gb|GL383260.1| GENE 6 4004 - 4567 680 187 aa, chain + ## HITS:1 COG:STM0608 KEGG:ns NR:ns ## COG: STM0608 COG0450 # Protein_GI_number: 16763985 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Salmonella typhimurium LT2 # 1 187 1 187 187 295 71.0 4e-80 MSLINTKILPFKANAFRNGDFIEVSDSDINGKWAVFFFYPGDFTFVCPTELGDLADHYEE LQAMGVEVFSVSTDSHFVHKAWHADSDTVGKVNYTMIGDPNLQLTRNFDVEREGAGQADR ATFLVDPDGIIQFYELTAEGIGRNATELVRKVKAAQYIYTHPGEVCPAKWEEGDETLAPS IDLVGKI >gi|302034491|gb|GL383260.1| GENE 7 4665 - 5372 577 235 aa, chain + ## HITS:1 COG:PA0140 KEGG:ns NR:ns ## COG: PA0140 COG3634 # Protein_GI_number: 15595338 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Alkyl hydroperoxide reductase, large subunit # Organism: Pseudomonas aeruginosa # 1 223 1 217 521 228 54.0 6e-60 MLDNALTTQLKTYLEMVREPIVLVPSPYRGDDAAKSSKSAHMDELLSEIAALSDKVSVGK PVDNERTPSFAITRPGSPIDIRFAGLPMGHEFTSLVLALLQVGGHPVKEEQSLIDAVRAV KGEHHFVTYMSLTCQNCPTVVQDLNAMAVLNPNIHHTAVDGGTHTNEVEAKGIASVPAIY LDGEDWGSGRMDMAEILERLDADAAQGAKEDLSQRDPYDVLVVGAGPAGAAALAS >gi|302034491|gb|GL383260.1| GENE 8 5440 - 6282 334 280 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 1 272 30 303 306 133 31 3e-31 MVGSRIGGQVLDTEAIDNLISVPHTTGPRLADALRSHVNDYNIDVIERQTASAIETTGGM TTVHLTDGDLRARSVIVATGARWRNLGVPGEKEYRTKGVTYCPHCDGPLFTGKKVAVVGG GNSGIEAAIDLAGVVDHVTVVEFLDALKADDVLLRTLNSLPNVDVITSARTTQILGDGSK VTGLEYEDRTSGDVKTIELAGVFVQIGLLPNTEWLEGALERNQRGEIVIDERGTTSAPGI FAAGDCTTQPYKQIIISMGAGATAALGAFDHLIRQNPTQN >gi|302034491|gb|GL383260.1| GENE 9 6289 - 7233 400 314 aa, chain + ## HITS:1 COG:XF1532 KEGG:ns NR:ns ## COG: XF1532 COG0583 # Protein_GI_number: 15838133 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Xylella fastidiosa 9a5c # 1 300 15 314 325 179 36.0 7e-45 MNLHDLRYFVALAEEHHFGRAAASCGVSQPTLSTQIHRLENELGVVLAVRVGRRIEITPV GERIAQAARDMLVLSDDIRTMAREEADRMTLQLRVGVFPTLGPFVLPQVIARCDQHEPGV NIHIVEKRTAELLEAIRNGQLDVAAVAAPVNDDSLVTIPVFREEFLLVTGADDELAREER PINPHDVPTEGLILMSEGHCLRDQVLEVCSPSHPLPPDTLTAGSLETLRELVSVGAGRTL MPRSAISAPLHADPRIVVREFTHPRPHRDIVVAGRPATMHRPAVQTLTTILRQLPGDVVE PLGVAGASLCSHGM >gi|302034491|gb|GL383260.1| GENE 10 7267 - 8700 1328 477 aa, chain - ## HITS:1 COG:Cgl2546 KEGG:ns NR:ns ## COG: Cgl2546 COG0015 # Protein_GI_number: 19553796 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate lyase # Organism: Corynebacterium glutamicum # 3 477 7 476 476 592 63.0 1e-169 MSVPNILATRYASAAMRSIWTPENKIRAERRLWLTVMEAQADLGVSFGGDDPEQVLADYQ AVLDDVDLDSIAEREAITRHDVKARIEEFNALAGHEHIHKGMTSRDLTENIEQMQVLESL RLVRDKMVATLNQLSRLAAQFSDQAIAGRSHNVAAQVTTLGKRFATAIDEMLVAWDHVNE LIERYPARGIKGPMGTAQDMLDLLGGDESKLDDLEHRVADHLGFNQVLTSTGQIYPRSLD FEVMSTLVQVLSGPSNLATSIRLMAGNELVTEGFKPGQVGSSAMPHKMNARSCERVNGFL VVLRGYLTMATGLAGVQWNEGDVSCSVVRRVALPDSFYAIDGAFETFLTILGDFGAFPAV IEAERERYLPFLTTTKVLMACVRAGVGREDAHEAIKEHAVAVALDMRETGRTGNDLFARL AADPRIPLTKEQLRGLVSSPLDLTGGAQDQVEALCAKVEDIVREYPKAANYLPGLVL >gi|302034491|gb|GL383260.1| GENE 11 8697 - 10016 818 439 aa, chain - ## HITS:1 COG:MT0796 KEGG:ns NR:ns ## COG: MT0796 COG0151 # Protein_GI_number: 15840187 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylamine-glycine ligase # Organism: Mycobacterium tuberculosis CDC1551 # 1 412 1 417 422 382 55.0 1e-106 MTVLVLGSGGREHALALACHRDPEVAAVHVAPGNPGTASFATNHPLDPCDCDAVVSLARG LEADLVVVGPEAPLVAGVADALRESGIDCFGPSAEAAQLEGSKAFAKEVMAAARVPTAAS RSCDDANSVSAALDEFGPPYVVKDDGLAGGKGVVVTHDRAEALAHAKRCFESDHRVVVEE YLDGPEVSLFAICDGTRALPMQPAQDFKRVGNGGVGPNTGGMGAYTPLPWAPDDLVETVS TTIISPTLRAMADRGTPFVGLLYVGLALTSAGPKVVEFNVRLGDPETEPLLSMVESPMAQ IMAAAARGDLSGVDGLRFRCGAAVGVVMASEGYPACPAKGRRVVAPVDDEDVLHAGTRIE GDGLVTSGGRVLVVLGHGETLAGARADAYRRIDQLEVSDGFHRTDIARHAAELEAVDEMA DGRAPQSENSTNLTDGESS >gi|302034491|gb|GL383260.1| GENE 12 10075 - 11361 1117 428 aa, chain - ## HITS:1 COG:Cgl2708 KEGG:ns NR:ns ## COG: Cgl2708 COG0104 # Protein_GI_number: 19553958 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate synthase # Organism: Corynebacterium glutamicum # 1 427 1 427 430 543 61.0 1e-154 MPGIVVMGTQWGDEGKGKATDLMSERVDYCVRYSGGNNAGHTVVVDDEKFFMHLLPSGVL NPNSTAVLGNGVVLNLDVLADEIDALRGRGVDIPHPLISANAHLITPYHQTLDKVTERFL GSRRIGTTGRGIGPTYSDKINRMGIRVQDLFDESILRQKVEASLDEKNQILVKIYNRRAI DPGEVADGLLAHAERIRPYVVDVARVLNKGLDEGKVVLFEGAQAHHLDVDFGTYPYVTSS NPIAAGACTGSGVGPTRIDRIVGIAKAYTTRVGEGPFPTELCDDDGERLRSEGGEYGVTT KRPRRCGWFDALVVQQAVMINSVTDLFLTKLDVLTGWERIPVCVGYDIDGERTDITPVTQ SDLHHAKPVYEFLDGWSEDISTARSFDDLPRNCQAYVRRLEELVGTRVSGIGVGAGRDES VVINDLID >gi|302034491|gb|GL383260.1| GENE 13 11529 - 12488 457 319 aa, chain - ## HITS:1 COG:no KEGG:PPA1995 NR:ns ## KEGG: PPA1995 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 319 7 325 325 583 100.0 1e-165 METQRRQRRRQTQEGDMSGHVVFRDMRPEDVKVITFGEPGSLIDRVDRPDVVARVALYEN RIVGYAVSWLAVVHRTRRFIDVEVHPDSRGHRIGTRLVRQIQQRVDRPLATKAIAGSDAE SFILSLGGEVYASCPPFELPRRHFGRAVEVLEGVSLGPGGAISGATLAPGVLETLWEQMY VWMHASWSPVDDSEAAHEALRQELEDLDSEATRVALVDGQPAAVAFVFVDENPTVVAETV QAGTPAGDNAVASAMSSVITWAEDAGYKRINFDGHRSDPHFGPLASRLPLEGASLNLMEI SVLPADDAGDPADGGATVA >gi|302034491|gb|GL383260.1| GENE 14 12570 - 13292 580 240 aa, chain + ## HITS:1 COG:BMEII0858 KEGG:ns NR:ns ## COG: BMEII0858 COG2186 # Protein_GI_number: 17989203 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Brucella melitensis # 19 231 20 227 242 85 28.0 6e-17 MSDTNDAVHLADNLNPAAERMFKWILSSDLAPGDPIPIEQDLATQFGMARGTVREAVREL RALGILEVRRGLGTYLSTASASTIRPSLVYRSVKQITTDESGTRDFIGLREMVEVRALME CSLVTEVTGRISAETGRALHALAARMDDPKDSAAADRQFHRLLYADMGNQLARELIDVFW DSLNLAGLMLPPTNTMPATRHAHDLIADCVIGHDPQASREAMWDHFAAIRERLGGAPRTS >gi|302034491|gb|GL383260.1| GENE 15 13417 - 14106 611 229 aa, chain - ## HITS:1 COG:SP1330 KEGG:ns NR:ns ## COG: SP1330 COG3010 # Protein_GI_number: 15901184 # Func_class: G Carbohydrate transport and metabolism # Function: Putative N-acetylmannosamine-6-phosphate epimerase # Organism: Streptococcus pneumoniae TIGR4 # 6 229 8 233 233 169 39.0 3e-42 MSGFTDRIIASMAGGLVVSCQAYPGEPLRHPETMAQMAAAVEAGGAVAVRAQGLSDVSAV KGRVSVPVVGIWKEGDEGIYITPTLRHARCVSAAGADVVALDGTRRERADGLSLAETIER LKREYDVVVMADCGSVDDGLFAAEAGADLIGTTLCGYTGERPKTDGPDYEVIEALVKKLD GDRPVIAEGRIHTPDQARRAMDLGAHAVVVGTAITHPTSITGWFRDALR >gi|302034491|gb|GL383260.1| GENE 16 14139 - 15059 953 306 aa, chain - ## HITS:1 COG:BMEII0862 KEGG:ns NR:ns ## COG: BMEII0862 COG0329 # Protein_GI_number: 17989207 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Brucella melitensis # 3 305 19 321 322 277 50.0 2e-74 MTTKFHGVIPPVVTPLTPNGDLDVASYEKLINRLIGQGVDGLFVLGSTSEVAFFDDEMRG RVLSEAKRIIDGRVPLLAGVIDTETLRVIRHIGQAEEIGVDAVVATAPFYAITGPTEIEN HFRALHEATDLPLFVYDIPVCVHVKVPVDLMMKLGREGVIAGCKDSSADDVSFRRLALAN RAAGSPLSLFTGHEVVVDGAFMSGADGVVPGLANVDATSYVAMYKAYREGDWETVRIEQD KAAELMEIAFAPQGVVGPAAGVGAFKTAMQLLGIIETNTMSVPLPTLTGDNVERVAEVLR RVGQLA >gi|302034491|gb|GL383260.1| GENE 17 15107 - 16009 571 300 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5064 NR:ns ## KEGG: HMPREF0675_5064 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 300 1 300 300 580 100.0 1e-164 MTAPTIVGAYAAMPRAIAERECLYRSLAETGWVDGIEIPYRDGLDADPRWLADQLRDRFA HCVVTAIPGTMGQLAGDPDFGLASSDEQGRQRALKWFTNLVDDVRTLHEMVGHPVVRWVE VHSAPSRKADAKAFASSLVELSGLFEDAGLAIVVEHCDAAGGVGPGEKEFLSLDDEITAV VGTRVHLTINWGRSVVESHDPELPARQVARLADAGVLGGVMLSGAGPDATQYGPAWGDAH LPLRNDEPTSLLTTDLVGSFLDAARGLQAYQGIKIQTPADATVERRLAMITSIHDVMATA >gi|302034491|gb|GL383260.1| GENE 18 16034 - 17638 1367 534 aa, chain - ## HITS:1 COG:nanT KEGG:ns NR:ns ## COG: nanT COG0477 # Protein_GI_number: 16131114 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 13 516 20 484 506 423 49.0 1e-118 MSNVEAIAARKSWRDELTGTQWKSFWAAWIGYLLDGFDFVMITLVLTEIGRTFHVGPAAT ATLVSAAFIARWFGGLLLGAIGDRIGRKEAMVISILLYAGGSVVCAIAPAFWVIFVARVC IGMGMAGEYGSSATYVIESWPVRLRNKASGFLISGFSLGAGVTAQVYALIEYLTRGTSAE PHTWRILFALGIIPIALALWLRRALPEAADFVKMREEEAARAAVGETVKKTDMFTMLFAR NPKRSIINIVLALTTFGCLIVIYLFKSGVPGLVLALLWVVVAAVMVSFMVQFEGPRWPTG VAVMITVFVAFLYSWPLQALLPTYYRQTLGLASDTASNLVTATSFGAAAGCIMAGFIGDR FGTRKAYWVSLLISEFLVLPVFLVSRGMVHSSVIWVVLLGVFIFVQQMFGQGISGLLPKF ISNYFPVEKRAAGLGFSYNVGALGGAIAPVLGIALAGDPATGVGGVLPSSWGLGWTLFIL SFVFTAVIIVLIAINFPLRMQKLLRPDHVRPADRMDHVDEELAVSRNPDTIVAS >gi|302034491|gb|GL383260.1| GENE 19 17766 - 18293 369 175 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5066 NR:ns ## KEGG: HMPREF0675_5066 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 175 1 175 175 290 99.0 2e-77 MAEEQNTDLTTEIEGQDHGVRLPPDPAIRKLAKRGRGEFMTVVKEHPSSSLCWALLAEGS LLSDTDAADVAAYAYARTGRDLGLEQLRDAGWDGEGPVDWGYLPNQGVFRCLHALAMAAE RLGFGDESDDADTLLRELSNEAWQALRGDDVPSDNAVDVDVDEELADEQDSDHQE >gi|302034491|gb|GL383260.1| GENE 20 18292 - 18558 169 88 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5067 NR:ns ## KEGG: HMPREF0675_5067 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 35 88 1 54 54 100 100.0 2e-20 MIPSLGRNAPRRLFGPPIKPYDNKLVSAKERIITMCRPVRCGICGKTTWAGCGEHIAHVK AQVPPSQWCDGTHTTAEKTAAQSPHSRS >gi|302034491|gb|GL383260.1| GENE 21 18691 - 20553 2046 620 aa, chain + ## HITS:1 COG:ML1498 KEGG:ns NR:ns ## COG: ML1498 COG1217 # Protein_GI_number: 15827789 # Func_class: T Signal transduction mechanisms # Function: Predicted membrane GTPase involved in stress response # Organism: Mycobacterium leprae # 7 608 3 615 628 751 62.0 0 MPVRKDLRNIAIVAHVDHGKTTLVDAMLWQSGAFREGAEVEKRVMDSMDLEREKGITILA KNTAVKHVMSDGEEITLNIIDTPGHADFGGEVERGLEMVDGVILLVDASEGPLPQTRFVL RKALAKKLPLILVLNKVDRSDARIDEVVEETYDLFMDLSDDDDASLLDVPVVYASAKAGR ASLNKPGDGELPDSPDLQPLFDCILENIPAPTYDEGGVLQAHVTNLDASPYLGRLALCRV VSGELTKGQTVAWCKRDGSVQNVKLSELLMTEALERVPAEKAGPGDIVAIAGIPEITIGE TLSDPENPVPLPLIHVDEPSMSMTIGINTSPLSGRSGDKLTARLLKARLDQELIGNVSIK VADTDRPDMWEVQGRGELQLAVLVEQMRREGFELTVGKPQVVTKTIDGKLHEPFERVTID APEEFMGPVTQMMGLRKGQMMHMVNHGSGWVRMEFVVPARGLIGFRTEFLTQTRGQGIMN QIFENFQPWVGELRTRQSGSMVADRQGVVTSYALFNLQERGTMFVSPGEDTYEGMVVGEN SRPDDMDVNPTKEKHLTNVRSSTGDELERLIPATKLSMEQQLEFCREDECLEVTPDVVRI RKTELNAHERAKARTRAKHS >gi|302034491|gb|GL383260.1| GENE 22 20730 - 21266 476 178 aa, chain + ## HITS:1 COG:no KEGG:PPA2004 NR:ns ## KEGG: PPA2004 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 178 1 178 178 345 100.0 7e-94 MRSPRAASLAAALVMSLSAGVVGVANAEPTASPEPRQSSPAVASPATLPISNTGAHLDRR CMKGTVICASKKQRKLWMVHNGRILITLDARFGRASEPTAEGVHTIYWKDKNHVSSVYGS PMPYSMFFYRGQAIHYSSDFSRRGWNGASHGCINIRNMSGLKWLWNRTPTGRKVIVFK >gi|302034491|gb|GL383260.1| GENE 23 21423 - 21785 394 120 aa, chain - ## HITS:1 COG:CAC2660 KEGG:ns NR:ns ## COG: CAC2660 COG1038 # Protein_GI_number: 15895918 # Func_class: C Energy production and conversion # Function: Pyruvate carboxylase # Organism: Clostridium acetobutylicum # 46 119 1070 1143 1144 69 48.0 2e-12 MKLKVTVNDVAYDVDVDVDKTANAPMAPILFGGGAGGPMKASGGGAGKAGEGEVPAPLAG TVAKILVAEGDAVKAGQVLLTLEAMKMETEINAPADGTVKGILVAVGDAVQGGQGLVALG >gi|302034491|gb|GL383260.1| GENE 24 21801 - 22043 299 80 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5071 NR:ns ## KEGG: HMPREF0675_5071 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 80 1 80 80 137 100.0 1e-31 MSENNELVIETLNKRLAALEAEVSRLKKTSKGVPEDVLAAICAAVSAYLGNDGKVQAVRF APSETWVRQGRRAQQNHSIR >gi|302034491|gb|GL383260.1| GENE 25 22070 - 23644 1639 524 aa, chain - ## HITS:1 COG:TM0716 KEGG:ns NR:ns ## COG: TM0716 COG4799 # Protein_GI_number: 15643479 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) # Organism: Thermotoga maritima # 12 523 2 514 515 593 56.0 1e-169 MAEKKPIKLADTMAGRIEQLADERHAVELGGGEDRLQKQRDRGKQTARERIDNLVDAYSF DEVGAFRKHRTTLFGMDKAEVPADGVVTGRATIHGRPVHIASQDFTVMGGSAGETQSTKV VETMEQSLLTGTPFLFFYDSGGARIQEGIDSLSGYGKMFYANVKLSGVVPQIAIIAGPCA GGASYSPALTDFIIMTKKAHMFITGPGVIKSVTGEEVTADDLGGADAHMSTSGNIHFVAE DDDAAVLIAQKLLSFLPQNNTEDAQISNPNDDVSPQPELRDIVPLDGKKGYDVRDVISKI VDWGDYLEVKAGWATNIVTAFARVNGRTVGIVANQPKVMSGCLDINASDKAAEFITFCDS FNIPLVQLVDVPGFLPGVQQEYGGIIRHGAKMLYAYSEATVPKITVVLRKAYGGSYLAMC NRDLGADAVYAWPSAEIAVMGADGAANVIFRRQIKDSEDPAATRAAKIEEYRNAFNTPYV AAARGQVDDVIDPADTRRKITAALETYATKRQSRPAKKHGVMPC >gi|302034491|gb|GL383260.1| GENE 26 23660 - 25153 1425 497 aa, chain - ## HITS:1 COG:TP0056_1 KEGG:ns NR:ns ## COG: TP0056_1 COG5016 # Protein_GI_number: 15639050 # Func_class: C Energy production and conversion # Function: Pyruvate/oxaloacetate carboxyltransferase # Organism: Treponema pallidum # 6 455 5 452 466 501 55.0 1e-141 MSPRKIGVTELVLRDAHQSLLATRMAMEDMVDACADIDAAGFWSVECWGGATFDSCIRFL NEDPWERLRTFRKLLPNSRLQMLLRGQNLLGYRHYNDEVVDKFVEKSAENGMDVFRVFDA LNDPRNLEHAMAAVKKTGKHAQGTICYTTSPIHTPESFVKQADRLIDMGADSIAFKDMAA LLKPQPAYDIIKGIKENHPDVQINLHCHSTTGVTLVTLQKAIEAGVDVVDTAISSMSLGP GHNPTESLVEMLEGTEYTTGLDMDRLLKIRDHFKKVRPKYKKFESKTLVNTNIFQSQIPG GMLSNMESQLEAQGAGDRMDEVMKEVPRVRKDAGYPPLVTPSSQIVGTQAVFNVLMGNGS YKNLTAEFADLMLGYYGKPIGELNPEIVEMAKKQTGKEPIDCRPADLLEPEWDQLVEQAK SLEGFDGSDEDVLTNALFPGVAPKFLKERAQGPKSVAMTEAQLKAEKEGTGAAGIAGPVN YNVTVGGNSHQVTVEPA >gi|302034491|gb|GL383260.1| GENE 27 25474 - 26832 1029 452 aa, chain - ## HITS:1 COG:PA1561_1 KEGG:ns NR:ns ## COG: PA1561_1 COG2202 # Protein_GI_number: 15596758 # Func_class: T Signal transduction mechanisms # Function: FOG: PAS/PAC domain # Organism: Pseudomonas aeruginosa # 1 148 1 143 195 101 38.0 3e-21 MSRPEPTGENRIVEPEEIFFSTTDAKGVIEKANSVFVDISRYSWDDLIGAPHNIIRHPMM PGAAFLAMWTTIKTGEPFCAYVHNLAADGATYTVLATVVPLGEGYLSVRVTPQVPEMLQA AETVYQAGRDAEWIAGEQGCGAPERARRGLDAVKTALEQAGYPDYGTFMRKALVQEVSVR RRQHRACRGMVDETTLGQLSSQVNRARQLVETWLETFDGLSDLSSKAGRTARTLSKAMTE SQRTADVITDSREATEASLRPLVTVLTLWSRMDAEIAPLVNGVVADLDAMATSADLTSFG LAVAHIQVESTRSFVSELWAEVDGWQRALPAIDDLSRAVEEAMSEANRRLDEVRDLADRA ASRTQELADLMAMPTALLTSWQQMASQRELSAGVADLVPRVEEQIGASQAMAAELTDVVA GLHKLADASNEELDVSVLAEIRRLGAEVAAGR >gi|302034491|gb|GL383260.1| GENE 28 27340 - 27585 122 81 aa, chain + ## HITS:1 COG:no KEGG:PPA2010 NR:ns ## KEGG: PPA2010 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 81 28 108 108 160 98.0 2e-38 MATYFAEAWGHAIFKAYNDDKAGLNEGILISDGPLPTRSSRSTGEPIMTVVMVPVNGKLL VDWNATVRANNSPLPPLPSHR >gi|302034491|gb|GL383260.1| GENE 29 27645 - 28670 1174 341 aa, chain - ## HITS:1 COG:ML0286 KEGG:ns NR:ns ## COG: ML0286 COG0191 # Protein_GI_number: 15827063 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Mycobacterium leprae # 1 341 1 344 345 459 66.0 1e-129 MPIATPEVYGEMIDRAKEQGFAYPAINVTSSQTLNAALQGFTEAGSDGIVQISTGGAEYA SGQTVKDMVTGAVALAEYAHVVAKNYPINVALHTDHCQKEKLDKYVNPLIAISQERVDKG QDPLFNSHMWDGSAIEVEENLQIAEELLSRTAKAKLILEIEVGAVGGEEDGVTGEINEKL YTTVADGMRTLEVLGLGEKGRYTTALTFGNVHGAYKPGYVKLRPGILKEIQDECGKKYGK EKPFDLVFHGGSGSTAQEIADAVSYGVIKMNIDTDTQYAFSRPVVEHMFKNYDGMLKIDG EVGNKKMYDPRSWGKKAEAGMAARIVEACEQLGSKGTSVSA >gi|302034491|gb|GL383260.1| GENE 30 28781 - 29371 325 196 aa, chain - ## HITS:1 COG:no KEGG:PPA2012 NR:ns ## KEGG: PPA2012 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 196 1 196 196 323 99.0 2e-87 MSTQPTEEPLRLVVAFNPVPSASRVAHHHATRFRLAVQAFIVVVIGGLLWALTADAFQLS MVMWMLGAWVVLFLVLFVIQNLRLHAARKDLLDVGEGPALIVCSRGLLLRRALRCESEGP VATSMDEVHWDDLSAVKVGGSSIGSGPGLVVYADDGRQWEVPLSWLDSRLADIDAAISTA SGGHVRVEQDGAGIAD >gi|302034491|gb|GL383260.1| GENE 31 29405 - 29995 434 196 aa, chain - ## HITS:1 COG:Cgl2714 KEGG:ns NR:ns ## COG: Cgl2714 COG0566 # Protein_GI_number: 19553964 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylases # Organism: Corynebacterium glutamicum # 4 188 14 198 206 234 61.0 1e-61 MPKPWPDDPRLDPELLASGDRRNVIDRYRYWTMEAIVADLDAQRSRLHVAIQNWEHDFNI GSVVRTANAFNVAAVHILGRRRWNRRGAMVTDRYLHVYHHSDVPSFLHWLDEHGVTPVGV DNLPGSVPLETVQLPQDCCLVFGSEGPGLTDEVVKGCEQLVAITQYGSTRSMNAGAAAAI AMYAWTTQWCPKPRTS >gi|302034491|gb|GL383260.1| GENE 32 30109 - 30837 171 242 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|154175107|ref|YP_001408238.1| ribosomal protein L22 [Campylobacter curvus 525.92] # 72 215 45 178 199 70 28 5e-11 MSSLLMTLPALLTPTWMDPQAIIQGTGAAALWIVALIAFAECGLAVFFMPGDSLLFALGM FAAVGVNSTVPLVHYGSVTTTLIIVNVVLIICAIAGNICGYWIGYLVGPKLFREREGFMG KVFSPKHVDTTHEFFRKHGSVALILARFVPIVRTFVTMIAGVGRMTFQKFITYTAIGGIL WVLIAVQAGYFLGQIPVVRNNFEAALLLIIVVSVLPMGVEWLKARRKGQVSQPQSARRSR VE >gi|302034491|gb|GL383260.1| GENE 33 30875 - 31420 338 181 aa, chain - ## HITS:1 COG:no KEGG:PPA2015 NR:ns ## KEGG: PPA2015 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 181 1 181 181 322 100.0 3e-87 MTHTTSEGTVRYGYLPSLPGMPKLIVVARVIVIGLSTMWALIICGLWVAGRSESQSTLGP ILTSFALGMDSGGWTGYLLTPLAGCVLTVTMGRGHAIDRYLFTVLSLGWMWWLSRGAEFI GGFDVIGVMAVAVVLVIVWSAPVNTWIKAVAERDKVIANPPEEGWLAPGQVQPWQANSRR R >gi|302034491|gb|GL383260.1| GENE 34 31523 - 32326 520 267 aa, chain - ## HITS:1 COG:Cgl1208 KEGG:ns NR:ns ## COG: Cgl1208 COG0421 # Protein_GI_number: 19552458 # Func_class: E Amino acid transport and metabolism # Function: Spermidine synthase # Organism: Corynebacterium glutamicum # 4 251 33 289 314 126 34.0 3e-29 MSRLLPDPDVAGAWMVRVGDADQSWIDPDDPTRLEFDYMQRIADHLDVHRPAGERMRVIH LGGAGMCLARYVAATRPTSPQIVCEPDAELTAEVRLKAPLPVRSGIKVRPVDGRSGVAAM REDFADVVILDAFDGARVPGDLVTVEFFADVSRILHSDGIGVANLADSAPLVWTKRVVRS VKEVFSNVCMAAEPATLKGRRYGNIVLAASNGPLHEEDLTRRCSGAAVPFRFIAGDALAK LLADARPFHDGDTESSPGPPGGATFFS >gi|302034491|gb|GL383260.1| GENE 35 32323 - 33363 704 346 aa, chain - ## HITS:1 COG:SPy0184_2 KEGG:ns NR:ns ## COG: SPy0184_2 COG2113 # Protein_GI_number: 15674389 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport systems, periplasmic components # Organism: Streptococcus pyogenes M1 GAS # 86 338 21 267 269 126 35.0 7e-29 MSHGVAAMAFLAGLIGLGLAGCSGTAGVYNSGDEAANGSRSGVEATPEAHAGATPDQKWT HCTPGARSKDITAMKPDTNTSLTIGAFNGWDESWATAGLIKQVLKKDGYTVTIKGFDAGV GYQATAGGDIDIITDSWLPVTQAGYIRKYGPKLENLGCWYDNAKLTIAVNKNSPAHSIAD LKKTGSAYGNVIYSIEPGAEMTKTIAHQTLPMYGLSSITLKTSSTPAMLAQLQKATKAGN NVAVTLWRPHWAYDAYPVRDLDDPKNAISNAELIYSFGRPGFEKDHPKAAQLIRNLAIDD AHLSSLEHLMVDTTKRGGQEDTAISRWMADNSDWVHDWLAGRLGSR >gi|302034491|gb|GL383260.1| GENE 36 33480 - 33857 185 125 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90021194|ref|YP_527021.1| ribosomal protein L20 [Saccharophagus degradans 2-40] # 4 124 3 133 134 75 38 1e-12 MTLLCPCGSGRNLDQCCGPILDDPRHAETAEALMRSRYTANTLGRWNHLWATWHPRTRPD VVDSQGVEWTGLQILATKDGQPGDITGMVEFRASYRAGKRHNVLHEVSRFQRRAGRWMYV DGDVD >gi|302034491|gb|GL383260.1| GENE 37 33793 - 34089 119 98 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|289425758|ref|ZP_06427513.1| ## NR: gi|289425758|ref|ZP_06427513.1| hypothetical protein HMPREF1034_1447 [Propionibacterium acnes SK187] hypothetical protein HMPREF1034_1447 [Propionibacterium acnes SK187] hypothetical protein HMPREF9567_01855 [Propionibacterium acnes HL013PA1] hypothetical protein HMPREF9589_00233 [Propionibacterium acnes HL059PA1] hypothetical protein HMPREF9612_00129 [Propionibacterium acnes HL063PA2] hypothetical protein HMPREF9597_00384 [Propionibacterium acnes HL005PA4] hypothetical protein HMPREF9598_00543 [Propionibacterium acnes HL050PA1] hypothetical protein HMPREF9600_00943 [Propionibacterium acnes HL050PA3] hypothetical protein HMPREF9608_00112 [Propionibacterium acnes HL067PA1] hypothetical protein HMPREF9609_00393 [Propionibacterium acnes HL027PA1] hypothetical protein HMPREF9613_00128 [Propionibacterium acnes HL002PA1] hypothetical protein HMPREF9620_01344 [Propionibacterium acnes HL037PA1] hypothetical protein HMPREF9590_01552 [Propionibacterium acnes HL059PA2] hypothetical protein HMPREF9592_00773 [Propionibacterium acnes HL046PA1] hypothetical protein HMPREF9602_02400 [Propionibacterium acnes HL030PA2] hypothetical protein HMPREF9581_00063 [Propionibacterium acnes HL087PA3] hypothetical protein HMPREF9586_00034 [Propionibacterium acnes HL083PA2] hypothetical protein HMPREF9579_00035 [Propionibacterium acnes HL087PA1] hypothetical protein HMPREF9588_01110 [Propionibacterium acnes HL025PA2] # 43 98 1 56 56 100 98.0 5e-20 MRCPVSSVAQAGGCMSTGTSTKHLVLARLRRGRRDDAIEPCAVRTGRGMTTTGHCALRLM SQIPTPHNGVGLIVLAVVVVSSWLTPLDGRRTSWHGHG >gi|302034491|gb|GL383260.1| GENE 38 34043 - 34225 198 60 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5085 NR:ns ## KEGG: HMPREF0675_5085 # Name: not_defined # Def: transporter, major facilitator family protein # Organism: P.acnes_SK137 # Pathway: not_defined # 7 60 450 503 503 103 98.0 3e-21 MTVPRAAPLVGGYFIGAGIMLTGGLVALFMGVDAEGKGLEAITDPLSRDRAKKSAARQAE >gi|302034491|gb|GL383260.1| GENE 39 34128 - 35555 1238 475 aa, chain - ## HITS:1 COG:Ta0334 KEGG:ns NR:ns ## COG: Ta0334 COG0477 # Protein_GI_number: 16081466 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Thermoplasma acidophilum # 19 237 7 225 445 124 29.0 5e-28 MSDAQATERTITSLIPARIDRLPWSTFHTMVIVGLGTAWILDGIEVQIVAANGFAKPLHM STTEVTAAATFYLLGQVLGALFFGKLTDRIGRKKLFTLTLLVYLLGSGIAGLSFSTWFLY VCRFIAGSGIGGEYSAINSAIDELIPAQYRGRVDLSVNGTYWAGVMLGSVATIYLLDPTK VAEFWGWRIGFFIGSVLGIVVILIRKHIPESPRWMLTHGYGEQAEEIVAGIEQDVRESGH ELEPVSDDQAITLEPEVRRQGRRNFSQRWVEFKESGAELVEVFLRRYWKRTVLGVTLMVT QSFLYNAIFFTYEIVLSQFYSVSKSDVGLYMIPFAVGNLLGPILLGRFFDTVGRRKMIFA TYGIAALVLAISAILFQRDALTPTTHTIFWCVAFFFASAGASSAYLTVSEIFPLEVRGQA ISYFFSIAQIAGAIAPFIFGNLIGDGSSRGPPCRRLLHRCRHHAYRWSRRFVHGR >gi|302034491|gb|GL383260.1| GENE 40 35706 - 38291 1779 861 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 4 853 1 804 815 689 44 0.0 MRHVMDTNLTTMSRDAVTAATRHALAHGNPSVEPSHLLHALFTIPDNTVSPLVAGLGIDP QQVDAVATAAMRSLPSSTGASVAQPQLSGAFARVIADAQNRAEAMGDSFVATEHLLISLT AVPSDVQNGLAGLGLKPDSLAAAFNEGRGDRRVTSEESEGGESALAKYSVDLTERARAGK LDPVIGRDQEIRRVVQVLARRTKNNPVLIGEPGVGKTAVVEGLAQRVVAGDVPDSLKGRR VVSLDLSSMVAGAKYRGEFEERLKAVLNEIKEAEGQIITFIDELHTVVGAGASGEGAMDA GNMLKPMLARGELRMIGATTLDEYREHIEKDPALERRFQQVFVGEPSVEDTIAILRGLRE RYEAHHKVRITDGALVAAASLSHRYITARQLPDKAIDLIDEAASRLRMEIDSSPEEIDTL RREVDRMKMEIFAVEKEDDPASQQRLTRLRADMADKEETLRGLESRWEAEKAGLNKVGEL KTRIDELRTAADKYQREGDFGRASEILYGQIPGLEKEMEAAAKAEEETPRMVSEEVGTSD IAEVVSSWTGIPVGRMMQGEQEKLLHMEERLHERLIGQDRAVKTVSDAVRRSRAGISDPN RPTGSFLFLGPTGVGKTELAKSLAEFLFDDETALVRIDMSEYMEKHSVSRLVGAPPGYIG YEEGGQLTEAVRRRPYSVILLDEVEKAHSDVFNILLQVLDDGRLTDGQGRTVDFRNTILV LTSNLGSQFLSDASLDDHAKREAVMGAVRQAFRPEFLNRLDDVVMFDPLSMADLGRIVET NLAKLNSRLAERRITIAVTDAGKDWLAMAGFDPIYGARPLRRLMQTTIDDQLARKVLSGQ VQEGDTATFDINEAGDGLVIL >gi|302034491|gb|GL383260.1| GENE 41 38368 - 38598 75 76 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313808307|gb|EFS46778.1| ## NR: gi|313808307|gb|EFS46778.1| conserved domain protein [Propionibacterium acnes HL087PA2] conserved domain protein [Propionibacterium acnes HL036PA2] # 1 76 1 76 76 130 100.0 4e-29 MLGDGSQIGHGEYLARVVAVASAFPIGENERSSEGRSCHLTIGTGGRPLPVILTVTTRSG WTSQWFRGGRGATPLG >gi|302034491|gb|GL383260.1| GENE 42 38569 - 39927 1016 452 aa, chain + ## HITS:1 COG:SA0180 KEGG:ns NR:ns ## COG: SA0180 COG1114 # Protein_GI_number: 15925890 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid permeases # Organism: Staphylococcus aureus N315 # 13 424 11 426 449 284 40.0 3e-76 MSDLRTVPKHTALLIGLMIFGLFFGAGNLIFPVELGRLAGHSAPVTAAGFLVTAVGIPIV AIISSAVSGCSSVHGMTSRVSSQYATIFTCLLYLTIGPAFAIPRTATVSYEVGVAPFIQG HGPALPIFTIVFFAMTLVAALKPGKLMDWVGRYLTPLFLALLAILIVATLIHPMPTVANR PPQPPYDHQPFMHGFLDGYNTMDALASLAFAIVIIEAINQRGSTGRHDVTHITIRAGLVA TIPLTLVYVSLAWLGRTSTLVVPNAANGGVVLAGVSRHYYGTAGQVLIAAIVLVACLKTA IGLVVACAEIFRRMFPAGPSVRSWVVIFSVASAIIANAGLTTIIAWSTPVLMFLYPLAIT AIILGLLDPWLGASRLPHRIMTGCVVLAALPDLVRALPIQGSGTRAITHVADMVLPWASD GLGWGLPAIIGLAAGWGASLILGRPRRWGTSS >gi|302034491|gb|GL383260.1| GENE 43 39934 - 40680 567 248 aa, chain - ## HITS:1 COG:L165449 KEGG:ns NR:ns ## COG: L165449 COG0561 # Protein_GI_number: 15672552 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Lactococcus lactis # 2 246 1 248 252 182 35.0 5e-46 MIPELVAFDLDDTLAPSKTRLPQEMARIIVRLLDRTSVCVISGGQFGQFRTQVVEALVDA PRLDRLHLLPACGTQYYRCVDGEWQRIYVEALTDDEKSRAMEAVETCARDLGLWEEHTWG PVLEDRESQITFSALGQQAPVDAKKAWDPSGDKKLKLREAVAGKLLDLEVRAGGSTSVDI TRVGRDKSFGIAKLLEMTGLSKADVLFYGDRLDEHGNDYPVKAMGIPCVAVDDWHDTLVK LEDLLSQA >gi|302034491|gb|GL383260.1| GENE 44 40762 - 41670 947 302 aa, chain - ## HITS:1 COG:slr0943 KEGG:ns NR:ns ## COG: slr0943 COG3588 # Protein_GI_number: 16330995 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1,6-bisphosphate aldolase # Organism: Synechocystis # 1 302 1 300 300 333 58.0 2e-91 MTATNARAQQTERMGTAPGFIAALDQSGGSTPKALKAYGVEPEVYGDDQDKMFDLVHEMR TRIITSPSFTSDHILAAILFEMTMDRKIEGIPTGDYLWEKKGIVPILKIDKGLADEDRHV RLMKPIPGLDELLHRAVEDKHIFGTKERSVILDDDKAGIEKIVDQQFELAEQVRAAGLVP ILEPEVDIHALHKEKAEERLHNLIRAHIDSLPLDAKIMLKLTIPSSEDLYADLIADPKVL RVVALSGGYSREEANKKLARNRGLIASFSRALAEGLNVAQSQQEFDQTLRASIDSIYAAS VS >gi|302034491|gb|GL383260.1| GENE 45 41736 - 42305 415 189 aa, chain - ## HITS:1 COG:AGl1244 KEGG:ns NR:ns ## COG: AGl1244 COG1853 # Protein_GI_number: 15890743 # Func_class: R General function prediction only # Function: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 38 179 11 153 312 63 29.0 1e-10 MILEGSFLATIVKMSDKLKRVTTPNPAPTSAHELANDLATAFRGYPAGVAILTTMGAAGP EGLTVSSLASVSVVPAVVSVSLGNGSTTLATLTEESRVIVHMLDADRADLADDFAVPGAD HFAGTEWAPSAEGAPRLEMQGPILHGFVQSMTDTGSATLIAVTIDRIEAGNCHAPGLVRM AREWHEIPR >gi|302034491|gb|GL383260.1| GENE 46 42302 - 43489 834 395 aa, chain - ## HITS:1 COG:MT0951 KEGG:ns NR:ns ## COG: MT0951 COG1914 # Protein_GI_number: 15840347 # Func_class: P Inorganic ion transport and metabolism # Function: Mn2+ and Fe2+ transporters of the NRAMP family # Organism: Mycobacterium tuberculosis CDC1551 # 1 394 37 429 429 365 57.0 1e-100 MGPAFVAAVAYVDPGNVAANLAAGAGYGYLLVWVLVVANVVAMLVQYLSAKLGLVTGHSL PELVGGALPRRGSRLAYWFQAELVAAATDLAEVIGGAVALQLLFGLPLIVGGLMTGALSL AILAIPSRHGQRTFEIVIIGMLVVIAIGFTAGLAFSPLSWGGVASGLVPRFEGTETVMLA TSMLGATVMPHAVYMHSSLVRDRHGTDDRPKRITTLLRATRWDVAVSLVLAGSVNIAMLL LAAASLQGVKGIDGIAEAHAAMSNSMGPVVGLIFAVGLFASGLASTSVGAYAGAEIMAGL LHMRVPMLVRRLVTIIPALIILASGANPTQALVWSQVLLSMGLPLVLVPLARFTGDRRLM GQWTNGRVMAAIAWIVVAAVSALNVVLVVETVMGA >gi|302034491|gb|GL383260.1| GENE 47 43726 - 44925 793 399 aa, chain + ## HITS:1 COG:CAC2940 KEGG:ns NR:ns ## COG: CAC2940 COG4585 # Protein_GI_number: 15896193 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 155 397 167 390 402 93 29.0 8e-19 MILDSVMAFLVLIAAFATWGHDTNHNTAYRAWMALWVLTVCASWVWARTKPEVTASVLVA SHILQLAVYPFPSPQNTLVPLILYQVSLKTDPPRRRFWLAMCVVGPVSAGVSWGFAPTTS EPISYNTHLIRFSVIIIACMASCLAAWFAGSATRDRRQTMAALRQRAIDLERERDQSIRL ATQEERAKIARDIHDIVAHSLSVIVVQADGGAYLAHHEEAGDIETRLSASGQALDTIATT ARHALDETRRLVGVLRDNDAGPQLSPTQGLDDIPNLIREMKGALAITLTIKGRSECHEPL SQGAELACYRVVQEALTNVLKHGGPTATAHVTISHHPDDVTLDILDDGRGTSVTGIERAD GAGHGLVGMRERMSAWGGTLEVGSRPGHGFRVRAVIPTR >gi|302034491|gb|GL383260.1| GENE 48 44956 - 45630 722 224 aa, chain + ## HITS:1 COG:all4635 KEGG:ns NR:ns ## COG: all4635 COG2197 # Protein_GI_number: 17232127 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Nostoc sp. PCC 7120 # 5 214 2 208 219 183 45.0 2e-46 MTDPIRLLLADDQQMVRAGFRLVLDAQPDMSVVGEANDGAEALQLVDELAPDVVLMDIRM PVLDGLGATEKIMTSHPEAKILVLTTFDLDEYVHSALRAGASGFMLKDAGPTELLAAIRA VRDGDSVVAPSATRRLIERFIPRQGEGAATITDPKLVETLSDREREVLTCVGEGLTNAEI AERLYLAETTVKTHIGHILSKLGLRDRVSMVITAYDAGLVRPGR >gi|302034491|gb|GL383260.1| GENE 49 45775 - 46509 276 244 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225084369|ref|YP_002657150.1| ribosomal protein S16 [gamma proteobacterium NOR51-B] # 11 243 1 227 309 110 30 3e-23 MSASVTAATTMTSRTASAVRTLDLTKTYGSGTTLVRALRSVTLDIPSGRFTAIMGASGSG KSTLLHCITGLDSPTSGRVWIGDTEITHLDDDALTKLRRQHVGFVFQSFNLMPTLSAADN ITLPLRLSHTKVDKEWFDHITGMLGITERLGHKPSQMSGGQQQRVAVARALVTRPDVIVA DEPTGALDSEASGDLLTFLRHCVDDLGQTVVMVTHDHDAAARADDIVTVTDGQVSTARSQ EALA >gi|302034491|gb|GL383260.1| GENE 50 46506 - 48929 1718 807 aa, chain + ## HITS:1 COG:Cgl2500 KEGG:ns NR:ns ## COG: Cgl2500 COG0577 # Protein_GI_number: 19553750 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Corynebacterium glutamicum # 7 806 21 853 853 244 27.0 6e-64 MIHERRRLIPTMIAVIIGVAFVASTLMLMDSIKAYTLRIQAAAVGDATAVVTAKEPSKPM SSITVDKVAAVPGVTSVEQTRNAFLQRTDNGQASFVNGHLVPAHPHLVKGRAPAKLDEVA VNQSTAGNNAGIGSKIIVNDPSRNGAKPITLTVVGVLDPDARTTTTPTSPEIYLSAANLG RISGHSGANTVYVNSDRPASQIAQEVSKVVGTTATVRTADDERAYEANQASQGFAAMTTF MGAFAVIALVVAAIVIVNTFTILVVQRTRTLALARCIGATRKQVRRSVLGEALIAGLIGS VVGTALGIGVTQLMLMGLKAAGSPIDTSVSVTVTSCIIPILVGVVVTTLAALPPARRATK VTPVVALQPVTETPTRKIGRVRVGFGTLLFLAGTALVITCATSDMETKNAVMCGVAGGFI SFAGVLVLAPVLIGSLGRAIGVARPGGIPGELAIENTQRNPRRTATTASALLIGVTLIAT VATGAATGRASIGNMMNGHFPVDATVRAQGPLNNATIGDVKRSDGVWQVATVTTVPGTVE AGGKATKVAVQAASPEFPKVVRDESAAKGLDDSHAVGALPGAADGSKITVTVNGKKANLT LVRHGKDNEGLIVTQGILTKLAPHAQPTEIQVRYQDGTDQSKATQALSKSMSTHPGVTVT SSADQKAQMDKIINIMLGMVVGLLVISVIIAIVGVANTLGLSVVERTREIGLLRALGLTR AQVRSMFGKEALMLSGIAAILGIALGIGYGIAGSHALFGSLMTVETSVPWLQLLIVALVA VLAGWLASVIPGRRGATIKPAVALAEE >gi|302034491|gb|GL383260.1| GENE 51 48965 - 49345 411 126 aa, chain - ## HITS:1 COG:PA3470 KEGG:ns NR:ns ## COG: PA3470 COG0494 # Protein_GI_number: 15598666 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Pseudomonas aeruginosa # 7 124 21 134 152 69 41.0 2e-12 MRGRTCLNVRKKGADHVILPGGKIELGETPLEAAIREAREETRLVLDPDDLKHLGTFDAP AANHDADGIRCVVYVCNWREIWPEPVPDSEIVEYEWTDLDHCYDDVRQAPLLCDRVIPAL QQQGLL >gi|302034491|gb|GL383260.1| GENE 52 49501 - 50859 1342 452 aa, chain + ## HITS:1 COG:aroP KEGG:ns NR:ns ## COG: aroP COG1113 # Protein_GI_number: 16128105 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Escherichia coli K12 # 6 448 9 449 457 420 50.0 1e-117 MTEPDQQLHRSLRNRHIQLIALGGAIGTGLFYGAADSIAAAGPAVIVSYLIGGVVIYLIM RALGEMSVHNPTSGAFSEYAHQWWGDLPGFISGWNYWFNYIFVSMAELSVVGIYINYWFP VVPRWVSAAVLLAIVTTVNLLHVRAYGEVEFWFAIIKVVAIIAMIVLGLWIIFFGTGSTP ATGIGNLWRNGGFLPHGVTGMLAGIIVVMFSFGGTELIGITAGEAEDPQRSIPRAINRVV GRILLFYVGALIVMVAIVPWTKIDGNASPFVQIFDLVGIPGAAAILNLVVLTAAISAYNS GLYANGRMLHALAHQGDAPAFLGKVNKAGSPWAGVLLSSAVTAIAVVVVGLLPEQAFVYI MSIAMIAAIINWATIIITQMLFRRRLDPESRSELRFTMPGAPVTNWIVLAFLVLMVVVMT TMPPYRIAVAIGPIWLAVLGLGWQLSRRRQTL >gi|302034491|gb|GL383260.1| GENE 53 50902 - 52479 1254 525 aa, chain - ## HITS:1 COG:Cgl2162 KEGG:ns NR:ns ## COG: Cgl2162 COG2985 # Protein_GI_number: 19553412 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Corynebacterium glutamicum # 7 525 3 537 539 235 32.0 2e-61 MTVLTDFLATHQLLTILIVLASGALLGQIKFGPLRFGAAGALFMGLVVGALDPRFGQNLG MIKGLGVVLFCYTVGLAAGSTFLSDLKRQWGLMLAGVVGLAVMAAAGLGLGRLFGLTPAH VAGLYAGVLTSPAIDAASMATHGAADTLVGYALSYPVGVVVGLIMVAIIAKRCWPASKDN TSMAEAGLTAVSTVVDRETSIRQTPGFNDDQVRMSYLLRDGEMRLATPDDDLHVGDQVLV VGNPDDVNRAVEHLGHVSERTLTNERNELDFRRFVVSNPALVGRTLGSIDVRGRTSGKVT RVRRGDLDMLARSDIVLQPGDRVLCVVPAHRLSDAADLFGDSEARVSQVDALSLGLGAAL GLLLGALMVALPRGLQFELGTAAGPLVMGMILGSIHRTGPLRWQLPHATNAILRQLGLMI FLACVGLASGPAFLSQAVSGTGLAVIAVSAVTLVLGGAIVIAAAWCMKLSAQRATGAFAG FVGQPAILSYANSLVNDERIESAYGALFALGTVVKILLVQVIVLV >gi|302034491|gb|GL383260.1| GENE 54 52679 - 53722 879 347 aa, chain - ## HITS:1 COG:ML1784 KEGG:ns NR:ns ## COG: ML1784 COG1062 # Protein_GI_number: 15827950 # Func_class: C Energy production and conversion # Function: Zn-dependent alcohol dehydrogenases, class III # Organism: Mycobacterium leprae # 1 345 1 359 361 150 31.0 3e-36 MTETMLAERFHAADRSITLEDIPIPHPGPGEVLVKVAYCGICHSDLSLISGAFPAALPVV TQGHEASGTIVELGAGVIGWKEGDRVIPSAGRPCLKCRKCRRGAFTDCLDLNLMAFAYDG AWAEYHIAQASGMTKIPDNVPLDQAALLADAVSTPYAAVVRTGKVHMGNAVAVWGVGGVG THLVQLAKLAGGVPVIAIDLNDAVLERAKRVGADHTLRSDDPELMQKIEDITHGRMIDVA FDAVGIKPTLRACVDSLDVDGKAVSVGLSAQDIDAGPFLNFNLQRKQVLGHLGYKSQDIA LLAEMLSYHRLDLTESISRVIPLKDVESGIAELESHQGNPIRILVKP >gi|302034491|gb|GL383260.1| GENE 55 53826 - 54734 642 302 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5101 NR:ns ## KEGG: HMPREF0675_5101 # Name: not_defined # Def: GDSL-like protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 302 1 302 302 518 99.0 1e-145 MKRILKILSVVVAVVIVAGIAIGLRPYTHAFGSVFQNCYRSSAASAPGPATSAFSAVSST VTPLQAPTPAAYAAGQVTEHGGTLATLGLGDSVPQGGTCTGCTTFIERVGTDMARKAGVK AAVHNESVSGYKTADLLTQLESNNAKALLATSDLAIVTIGANDFDLDTMVGQCAHSDASC IADDVNGVTDRVRTILERVKAAMKTPRATVVVTGYWDVGLDGKAGRENGPDYVKVTDMIT EAFNANVKKIAHEVGAVYVDFRTPFRGADGTRDDTALLTDDGDHPSEQGHKVLAEAVEAA LS >gi|302034491|gb|GL383260.1| GENE 56 54838 - 55299 396 153 aa, chain - ## HITS:1 COG:MT0368 KEGG:ns NR:ns ## COG: MT0368 COG0789 # Protein_GI_number: 15839739 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Mycobacterium tuberculosis CDC1551 # 18 108 7 97 126 100 60.0 7e-22 MVRRSRNLSDAVDLAVIDKDAAIFAISVAAELAGMHPQTLRTYDRLGLVVPERTRGRGRR YSMRDVAALRMVQHLSQEEGINLNGIRRILQMERRIEQLSEQVDELTDTVRGMQVARYQG SEDPRVFTAESTGRVHMGRTVVHAQLALPSHRG >gi|302034491|gb|GL383260.1| GENE 57 55301 - 56443 867 380 aa, chain - ## HITS:1 COG:ML2494 KEGG:ns NR:ns ## COG: ML2494 COG0484 # Protein_GI_number: 15828348 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone with C-terminal Zn finger domain # Organism: Mycobacterium leprae # 1 363 1 369 388 315 49.0 7e-86 MSTKDWAEKDYYKILGVSKDAKPEEIKKAFRKIARDNHPDSHPGDKAAEARFKEASEAND VLSNVKKRKEYDQARSLFGSAGGFRFPRGGAQTSVNVEDFLRTASNGDGFGDLFGNLFGA SGGRRTASRSPRRGADVEGETTISFDDAVSGTTVTMDMVSQAPCQACRGTGARAGTVPRV CSTCQGSGMHASSAGGVFEMTEPCPDCHGRGMIVEDPCQVCHGSGRAKSTKSMQIRIPAG VEDGQRIRIKGKGSPGENGGKAGDLYVKVTVRPHEIFGRDGHNLTVTVPVTFPEATLGAE VEVPTLAGTTVRLRIPAGTPNGRTFRVRGRGVPRSDGSRGDLLATVEIAVPESLDDDARH VVERLRDSLPQATPRPWEVK >gi|302034491|gb|GL383260.1| GENE 58 56517 - 57182 699 221 aa, chain - ## HITS:1 COG:Cgl2739 KEGG:ns NR:ns ## COG: Cgl2739 COG0576 # Protein_GI_number: 19553989 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone GrpE (heat shock protein) # Organism: Corynebacterium glutamicum # 7 192 42 216 218 89 37.0 7e-18 MTDKNVNPDDDQADENRDDNVDERFADIVGDVDIDADQSATDSPAPEELSRESQLEALLA ERTEDLQRLQAEYVNYKRRVDRDRALSRQSGVDKVITDLMPVLDSIAMARQHGEVEGGFK LVVDELEKVANNHGLTSFGEVGDVFDPNLHEALMQMPMEGVSVTSVSQVMQPGYKLGDRV LRPARVAVSDPDPNATSADESSQADGESAQADEDDETPRNE >gi|302034491|gb|GL383260.1| GENE 59 57267 - 59120 1930 617 aa, chain - ## HITS:1 COG:Cgl2740 KEGG:ns NR:ns ## COG: Cgl2740 COG0443 # Protein_GI_number: 19553990 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Corynebacterium glutamicum # 1 617 1 618 618 741 68.0 0 MARSVGIDLGTTNSCVAVLEGGEPTVIPNAEGARTTPSVVAFTNSGETLVGEVAKRQAVT NVDRTVRSVKRHMGEAWTMGVDDKTYKPQQISAFILQKLKRDAEAYLGEPVTNAVITVPA YFSDAQRQATKEAGEIAGLAVDRIVNEPTAAALAYGLDKTDKDQTVLVFDLGGGTFDVSL LDISDGVFEVKATNGDNHLGGDDWDQRIVDWLVTQFKNANGIDLAADKMAKQRLQEAAER AKIELSQASETHINLPYITAGAAGPLHLDEKLTRAEFQRMTSDLLERCRTPFNAVMKDAG LNVSQIDEVILVGGSTRMPAVAELVKELAGKDPHKGVNPDEVVALGASLQAGVLKGEVKD VLLLDVTPLSLGIETKGGVMTKIIERNTTIPTKRSEVFTTAEDNQPSVMIQVFQGEREFV RDNKSLGNFELTGLMPAPRGIPQIEVSFDIDANGIVHVHAKDMATGKEQSMTVTGGSALG KDEIDRMVKEAEANAEADKKRREAVEMRNEADALAFRTEKLLDENSDKIPEDTKTPVTEA IATLKETLKGTDNDDEVKAAMDDLNQKASAMGQAIYAAAQQAQAENPQGQDAESASSESG DDTVVDAEIVDDEDEKK >gi|302034491|gb|GL383260.1| GENE 60 59380 - 59613 311 77 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5106 NR:ns ## KEGG: HMPREF0675_5106 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 77 1 77 77 94 100.0 1e-18 MNIDWTSLGLVSVVTVVATVLIVSVVSGGALMLDRAHARAEAGSDGAAGLVALGWTAIGV AGLIVLYGLYLLIPYFH >gi|302034491|gb|GL383260.1| GENE 61 59610 - 60755 947 381 aa, chain - ## HITS:1 COG:Cgl0455 KEGG:ns NR:ns ## COG: Cgl0455 COG0306 # Protein_GI_number: 19551705 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate/sulphate permeases # Organism: Corynebacterium glutamicum # 3 362 38 415 461 315 51.0 7e-86 MSSTLLIVVIVVVTALAFDFTNGFHDSANAMATSVATGALKPKVAVIIAAVLNVIGACLS TEVAKTISGGIVNDHLVTAPMVFAGLIGAIIWNLATWLFGLPSSSSHALFGGLIGAVLVE AGMSGIDAGKIMSKIVLPALVAPFVAGIAALVATWLAYRITNHTAHHSSRMFLNGQRVSA SMVALAHGTSDGQKTMGIITLVLISAGYQASGTGPEWWVILAAGCAIGLGTYSGGWRIMR TMGKGLCDIESPQGFAAETASTAAILASSHLGFALSTTHVCSGSILGSGIGRHTEVRWAT AGKMVIAWLVTLPAAALVGAVTSAVAGAGTWGVIVDLGLLAVMAALIVRQANQHKVDHRN VNDSTQVGVRKGSAVAGGTAA >gi|302034491|gb|GL383260.1| GENE 62 61060 - 61185 74 41 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313771713|gb|EFS37679.1| ## NR: gi|313771713|gb|EFS37679.1| hypothetical protein HMPREF9574_01917 [Propionibacterium acnes HL074PA1] hypothetical protein HMPREF9575_00529 [Propionibacterium acnes HL110PA1] hypothetical protein HMPREF9576_00553 [Propionibacterium acnes HL110PA2] hypothetical protein HMPREF9580_00494 [Propionibacterium acnes HL087PA2] hypothetical protein HMPREF9587_00895 [Propionibacterium acnes HL025PA1] hypothetical protein HMPREF9589_00207 [Propionibacterium acnes HL059PA1] hypothetical protein HMPREF9593_01612 [Propionibacterium acnes HL046PA2] hypothetical protein HMPREF9605_00843 [Propionibacterium acnes HL036PA2] hypothetical protein HMPREF9611_00093 [Propionibacterium acnes HL063PA1] hypothetical protein HMPREF9612_00100 [Propionibacterium acnes HL063PA2] hypothetical protein HMPREF9616_00895 [Propionibacterium acnes HL007PA1] hypothetical protein HMPREF9617_02549 [Propionibacterium acnes HL056PA1] hypothetical protein HMPREF9591_01078 [Propionibacterium acnes HL086PA1] hypothetical protein HMPREF9597_00355 [Propionibacterium acnes HL005PA4] hypothetical protein HMPREF9598_00569 [Propionibacterium acnes HL050PA1] hypothetical protein HMPREF9600_00970 [Propionibacterium acnes HL050PA3] hypothetical protein HMPREF9608_00138 [Propionibacterium acnes HL067PA1] hypothetical protein HMPREF9609_00419 [Propionibacterium acnes HL027PA1] hypothetical protein HMPREF9613_00154 [Propionibacterium acnes HL002PA1] hypothetical protein HMPREF9618_00063 [Propionibacterium acnes HL082PA1] hypothetical protein HMPREF9620_01315 [Propionibacterium acnes HL037PA1] hypothetical protein HMPREF9564_00444 [Propionibacterium acnes HL053PA1] hypothetical protein HMPREF9573_01018 [Propionibacterium acnes HL072PA2] hypothetical protein HMPREF9594_01240 [Propionibacterium acnes HL005PA1] hypothetical protein HMPREF9596_00639 [Propionibacterium acnes HL005PA3] hypothetical protein HMPREF9565_00536 [Propionibacterium acnes HL053PA2] hypothetical protein HMPREF9569_00102 [Propionibacterium acnes HL078PA1] hypothetical protein HMPREF9615_00245 [Propionibacterium acnes HL002PA3] hypothetical protein HMPREF9572_02406 [Propionibacterium acnes HL072PA1] hypothetical protein HMPREF9583_02223 [Propionibacterium acnes HL038PA1] hypothetical protein HMPREF9590_01578 [Propionibacterium acnes HL059PA2] hypothetical protein HMPREF9602_02372 [Propionibacterium acnes HL030PA2] hypothetical protein HMPREF9337_02205 [Propionibacterium acnes HL096PA3] hypothetical protein HMPREF9338_00061 [Propionibacterium acnes HL096PA2] hypothetical protein HMPREF9344_00062 [Propionibacterium acnes HL097PA1] hypothetical protein HMPREF9571_00914 [Propionibacterium acnes HL043PA2] hypothetical protein HMPREF9581_00089 [Propionibacterium acnes HL087PA3] hypothetical protein HMPREF9586_00062 [Propionibacterium acnes HL083PA2] hypothetical protein HMPREF9579_00061 [Propionibacterium acnes HL087PA1] hypothetical protein HMPREF9563_00874 [Propionibacterium acnes HL020PA1] hypothetical protein HMPREF9588_01137 [Propionibacterium acnes HL025PA2] hypothetical protein HMPREF9343_00219 [Propionibacterium acnes HL099PA1] # 1 41 1 41 41 67 100.0 5e-10 MPWIKGFTWKVRFALWVSCYLPVKMGNGVTPAAAGADVKSW >gi|302034491|gb|GL383260.1| GENE 63 61179 - 61910 735 243 aa, chain + ## HITS:1 COG:MT3872 KEGG:ns NR:ns ## COG: MT3872 COG0745 # Protein_GI_number: 15843385 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Mycobacterium tuberculosis CDC1551 # 12 242 55 285 286 289 66.0 4e-78 MAFPTQPSRFTRADGSPIRVLVVEDEPSLTGLLSMAMRYEGWDVTTANSGAHAVHEAQAT RPDVIVLDMRLSDFDGLEVMRQIRINQPTVRAVFLTAKDAASGRIAGLTAGGDDYVTKPF SLEEVIARLRALLRRSGATEPKPDSMLTVGDLTLDEDSREVRRAGEEIHLTTTEFELLRY FMRNPKRVLSKAQILDRVWNYDFRGQANVVELYISYLRKKIDRGHKPMIHTMRGAGYVLK PAE >gi|302034491|gb|GL383260.1| GENE 64 62062 - 62289 136 75 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVVKWLSVIVFLRSPRRLTGKILSCPVRLFQSLRSSGLMYTLSLMTTACTVITFIRLIVI PILGAYCLTKGIEAL >gi|302034491|gb|GL383260.1| GENE 65 62349 - 62717 67 122 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|327335203|gb|EGE76913.1| ## NR: gi|327335203|gb|EGE76913.1| hypothetical protein HMPREF9344_00065 [Propionibacterium acnes HL097PA1] # 1 86 1 86 88 165 98.0 1e-39 MCQKDAHELIDMATDFMNRRPQLSRGGHFEILEHDGISRLFYHRASCCHWYDVPHSGKHC TWCSRLSVEERRRRLMGLLEQETTNDKPVGWRHLPKTRSWHVLCPTVCHRVGRHDRSHPA DP >gi|302034491|gb|GL383260.1| GENE 66 62650 - 63324 654 224 aa, chain + ## HITS:1 COG:L63310 KEGG:ns NR:ns ## COG: L63310 COG0274 # Protein_GI_number: 15673422 # Func_class: F Nucleotide transport and metabolism # Function: Deoxyribose-phosphate aldolase # Organism: Lactococcus lactis # 15 220 7 213 220 179 51.0 3e-45 MSSAPLSATELAGMIDHTLLTPEATHNDVAKLVADAKKYGTWSVCVSPSMLPLNLDMGDV HLAVVCGFPSGKHTSAVKAAEAREAIAAGAEEVDMVINLGLVKEGRWEDVTADIAAVKQA VPDPKILKVIIESAVLTDDEIVRACQAAEKAGADFVKTSTGFHPRGGASVEAVKVMADTV GGRLGVKASGGIRDYQTACAMVEAGATRLGVSSTAKILAGAPTE >gi|302034491|gb|GL383260.1| GENE 67 63348 - 64076 664 242 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5111 NR:ns ## KEGG: HMPREF0675_5111 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 242 1 242 242 494 100.0 1e-138 MGHILVLSGAGRYADNIHDFDATSEAVSQVLTERGHQVEVRRSYPEALDHLAGADLLIVN TGGGDPEEEWDYIPEWSRAHSKILEHHEAGKPILGLHTACNTFCDWDLWSSILGGKWVLG VSGHPERSYAVFEPMPEAADHPILRGVEQVVVYDERYSDLDINPLATPLLFHETGEEFHP MCWVMGNSVVYDGLGHSPRSYYSASRRQLLCNEVSWLLNWKRREAAAKGAAEVNPSSTQP VL >gi|302034491|gb|GL383260.1| GENE 68 64223 - 65398 814 391 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5112 NR:ns ## KEGG: HMPREF0675_5112 # Name: not_defined # Def: FHA domain protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 391 1 391 391 702 100.0 0 MSQTFGAWRATYIPGSWVVLTGPSSLVVMQPAAPRHSGLVSSIWRHVAEAKDPESLVETL SIIGLAKMPSLGAFFWVDGEMYSLARGQIVVKDASTGEIVNHGDGLLTWSEKKLNPATIV VEMEQAGQGLSMPLLLGVAQASKLIIDATGNVEPFIVPQTDEVHRPRVLGDDALKPWTSE SDEAHKADESEGSDETGEDAGSGEAPDDEDRAPGFVEVPAPGEVPETAVGPASVTESATS DEARESDGEDAVAPVRSQDDSHGDWRFASISTSDRLSSQSDAAAATLVSSTGEVTHLYGP VLIGRAPRGDNGEDIMRVPSPGQDISRTHVKVAPGQWGIEVTDMHSTNGTVVCRIGQEPL QLESGQTVDLSIGDSVDLGDGVVITIEAYQG >gi|302034491|gb|GL383260.1| GENE 69 65571 - 68222 2638 883 aa, chain - ## HITS:1 COG:BMEI1436 KEGG:ns NR:ns ## COG: BMEI1436 COG0574 # Protein_GI_number: 17987719 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate synthase/pyruvate phosphate dikinase # Organism: Brucella melitensis # 10 868 56 917 930 934 55.0 0 MTDRYVYDLSEGSAEMKPLLGGKGAGVAEMKRLGVPVPDGFTVTTEACVDTMTRKGEWPE DLESQVWDGLKRLEERTGRVLGDDKKPLLVSVRSGAVISMPGMMDTILNLGISDDTVEAI AKEAGNERFAWDCYRRFIQMYGEVVEGIDAHIYEDALTALKEKKGVESDTDLSADDLKGL VDTFKKLSNEQLGGNWTTDPREQLMRAVDAVFRSWLNPRAFVYRKANKIPDDLGTAVNVM QMVFGNRGDTSATGVCFTRNPATGEKELYGEFLVNAQGEDVVAGIRTPRSLAEMEEVLPE AYHDLIDTMKKMESHYRDMQDMEFTVENGKLYLLQTRNGKRTAAAALKVARDLVDEGVIT KEEALMRIEPAQLDQLLHEAIDPDHSEQPVAEGLPASPGAAVGEAVFDADVAAERGAKGE KVVLIRFETTPDDIHGVIVSQGVLTAHGGMTSHAAVVARGMGKPCVAGARGIKIDAKAAT LTIGDTVIHEGDMITLDGSTGEVFASGLKLIPPQINADFQEVLSWADEIRRLGVEANADN ATDAAKARELGAEGIGLCRTEHMFFGADRLPAMHEMITADTPEERQAAVDKILPMQQDDF EGIFTAMKGLPVTVRLLAPPLHEFLPNLVEQSLKVQKMENQGADAGELDKERRLLAQVKK LHEQNPMLGTRGCRLGMLYPEIPDMQARAIIRAVLSVLKKEGETVQIHIMIPLVFTPIEL ETHRRIVQQAIDEEFESAGTKVDVKIGTMIELPRAALVADKIAEVADFFSFGTNDLTQTT LGISRDDAENGFLTEYLRTKVLKDNPFASIDQEGVGQLVAGAVEKGRKTNPELSVGVCGE HGGDPDSIHFFNKTGLDYVSCSPFRVPIARFAAAQAVISQQEK >gi|302034491|gb|GL383260.1| GENE 70 68561 - 69445 681 294 aa, chain - ## HITS:1 COG:BS_yqfL KEGG:ns NR:ns ## COG: BS_yqfL COG1806 # Protein_GI_number: 16079578 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus subtilis # 8 265 6 259 270 179 40.0 7e-45 MAESPLEIHVIADSTGETAVRLARAARSQFEGAHWHIVRHPMIGTVPEMVSALEAVSEAH EAGQWVCVVHTLVLPDMRRMVSDACEEMGIRELDLMGPMLEAMEEASGLDADAVPRRPVG VEADYFTRISAMEFAVRNDDGAIPDRLTEADICLVGVSRSGKTPLSIYLGYLGYKTVNVP LVPGIAPPTELAAVDRWRIVGLTIDAQRLLEIRGRRVRGLGGFGNEDGYADLAAIYEELD EGGKIQRRLGCPIIDTTGLALEESATKVIDVVDQRAKTAGTRLRKPAGSYRMRP >gi|302034491|gb|GL383260.1| GENE 71 69477 - 69788 92 103 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MASGMSARSRQSSAHAATRPSAICIKEGRPNTHTELACGDSAAMSSSTGSRVAASMVAVS QIGRAPTWRCCSELSVSADGNVNIVLLGCFSAAMDSRCAVVAA >gi|302034491|gb|GL383260.1| GENE 72 69622 - 70626 803 334 aa, chain + ## HITS:1 COG:PA4617 KEGG:ns NR:ns ## COG: PA4617 COG2813 # Protein_GI_number: 15599813 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S RNA G1207 methylase RsmC # Organism: Pseudomonas aeruginosa # 55 330 95 371 374 123 32.0 4e-28 MDAATRDPVDELIAAESPHANSVWVLGRPSLMHMAEGRVAAWADDCRDLADIPEAIRLNP LTAGDVSDSPVVWMGLPASLDELDELLGTLWRILGPDAHVVAGGRIKHMSRSMNDVAARW FNEVHASLGVRKARVLHFSSPRQRPAITGTWPRTNTVNGLTIRAHGGVFHTAGVDAGTSL LLDYLDAIAADVHSDAVDLGCGNGVISAHLARLLPQATIHATDVSWQAIDSTHLTAQANQ LDIVTHWCDGLVDIPNESVDVVVTNPPFHRGTAQDHAPTLAMLADAARVLRPGGTLWCVY NNHLPWASHVQRTVGPTHQVVRNRRYTVIRTVRR >gi|302034491|gb|GL383260.1| GENE 73 70706 - 71563 692 285 aa, chain + ## HITS:1 COG:Rv3042c_2 KEGG:ns NR:ns ## COG: Rv3042c_2 COG0560 # Protein_GI_number: 15610179 # Func_class: E Amino acid transport and metabolism # Function: Phosphoserine phosphatase # Organism: Mycobacterium tuberculosis H37Rv # 80 279 5 204 233 165 49.0 1e-40 MNSRVILVSDDRSSLRSPDTLLWPDAACMRGIHTGEWTAHIFEYAMSFEGNMTQVRELAA ANGVGVLHPHGALATDPPGLIVCDVDSTVTRTEAIDLLAECAGNADEVREITARAMVGEL DFTQSLYARVRCLEGLHIGALEEAWKATVITPGTAELVAAAHDVGAAVGLVSGGFTAIVD PLAEQIRADFAASNELEIVDNHLTGRVVGDIIDRAAKATWLRRWASERGVALERTIALGD GANDLDMFAIAGLPIAFCAKPVAVEAARNTIRCERIDTVRAVWAH >gi|302034491|gb|GL383260.1| GENE 74 71581 - 72375 435 264 aa, chain + ## HITS:1 COG:PA5422 KEGG:ns NR:ns ## COG: PA5422 COG0676 # Protein_GI_number: 15600615 # Func_class: G Carbohydrate transport and metabolism # Function: Uncharacterized enzymes related to aldose 1-epimerase # Organism: Pseudomonas aeruginosa # 8 264 36 315 318 103 28.0 4e-22 MSTLPGTLHSAHNGTWQVAEHGCQVLAWQADDKPVIWFDAEHADESQAVIRGGIPLCAPW FGHGPNNDQDPQHGLARRTDFEVTVADPFRVVGVAETASIGIRHEVVMTNTALEMTLTLT NHDQKPRLVEGMWHTYLRVADAAQARVRGVRGASWHNFATGDKGSFDANELAVAPDTDTV IQGVGPALALLDSAWGRQIHVETTGCPSAVVWNPRSSSTHADNPTAQAWRDFVCVETGAC KDNAVIVAPHSDLTMSTRISVETL >gi|302034491|gb|GL383260.1| GENE 75 72653 - 74167 1574 504 aa, chain + ## HITS:1 COG:Cgl2515 KEGG:ns NR:ns ## COG: Cgl2515 COG0427 # Protein_GI_number: 19553765 # Func_class: C Energy production and conversion # Function: Acetyl-CoA hydrolase # Organism: Corynebacterium glutamicum # 1 502 1 501 502 642 62.0 0 MSERIANAALRQKVMSADDAAALIHDGDQIGFGGFTGSGYPKELPGALTKRIQESHGRGE KFTVNVFTGASTAPELDGALASVDGIGWRMPYQSDPQMRSKINDGTSFYTDIHLSESGMM VRQGFFGKVDFAVIEATRITADGDVVLTSSVGNNAVYCDTAEKVIIEVNSWQSEDLEGMH DIYGGFALPPNRVPIPITHPGDRIGDKFLHIPQNKIVAIIETAGPDRNTPFKPIDDDSRK IAGFLLDFYDNEVKQGRIPKNLLPLQSGVGNIPNAVLDGLLHSDLEHLTSYTEVIQDGMI DLIDAGKLDVASATAFSLSPDYAHKMNENAAFYRDHIILRPQEISNHPEVIRRLGVIGAN GMIEADIYGNVNSTHVMGSRMMNGIGGSGDFTRNAYISAFVSPSTAKGGAISAIVPMVSH VDHTEHDGMVIITEQGIADLRGLAPRQRAPKIIENCAHPDYRPMLLDYYERALRDCKFKH TPHLLGEAYSWHTRFLETGTMKKD >gi|302034491|gb|GL383260.1| GENE 76 74382 - 74789 204 135 aa, chain - ## HITS:1 COG:Cgl2837 KEGG:ns NR:ns ## COG: Cgl2837 COG0154 # Protein_GI_number: 19554087 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases # Organism: Corynebacterium glutamicum # 1 125 262 375 379 63 32.0 1e-10 MSRWLRAGGRRRSGVELAEALAGIQMVARQVGQHWQRFDVIVSPTLAQPPLPVGALRDDE DPAADFDAQCRFTPWTSLWNITGRPAMSLPLHNTRIDGVELPIGIMIGGRLYDEATLLAL GCALENTRDCERSCR >gi|302034491|gb|GL383260.1| GENE 77 75027 - 75344 181 105 aa, chain - ## HITS:1 COG:sll0828 KEGG:ns NR:ns ## COG: sll0828 COG0154 # Protein_GI_number: 16331726 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases # Organism: Synechocystis # 18 97 209 288 506 92 60.0 1e-19 MAGGSSGGAAAAVGAGQVPIAQGSDGGGSIRIPASCCGVVGLKPSRGRVSAGPYGIDGPG LVCGGVLTRTVRDTAAALDVLSGPWPGGPLLRPDPDRDLLVGLWP >gi|302034491|gb|GL383260.1| GENE 78 75396 - 75782 311 128 aa, chain - ## HITS:1 COG:no KEGG:PPA2054 NR:ns ## KEGG: PPA2054 # Name: not_defined # Def: amidase # Organism: P.acnes # Pathway: not_defined # 1 128 1 128 466 235 100.0 3e-61 MDPLTALETSTRIAAGDVGILDIVDAALEAAHADECHAWTWIDDTGARNTARKLQRQLDA GQARPGPLFGVPCPVKDLNALAGAPRAVGSRAVGGTPSDHDDGIVTRLKAAGAIPIGTTA APEFGLPC >gi|302034491|gb|GL383260.1| GENE 79 75687 - 75887 115 66 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MCRLEGGVDNVKDPDVTSGDTGGGFQGGQWIHSHGPTTFGVFSFEAQSLRPHIRIKNGLW RSKLTR >gi|302034491|gb|GL383260.1| GENE 80 75957 - 76568 259 203 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5121 NR:ns ## KEGG: HMPREF0675_5121 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 203 1 203 203 301 99.0 1e-80 MTEQSTHPKPRHAEPEDVSPSAPPRASAETIATLPPPEVPEAQAASSAKVGRIAAGLYLA AAVAAAAALLIAWWQSIHMQTFIQATNLMTWTHPRPGSLASVLLATAMMSIAAAMVAMPG ILAVNTWLGRRWVRWGAIGGVAVGCAAVTLNWVSWIGMPFLIAAGLMVWLPPVRRWMDSL RPVTHEAERPTFPMRYGRVPQHY >gi|302034491|gb|GL383260.1| GENE 81 76695 - 76895 121 66 aa, chain - ## HITS:1 COG:no KEGG:PPA2072 NR:ns ## KEGG: PPA2072 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 66 1 66 84 108 84.0 8e-23 MDAFETLVRLFYEGVRCDEVLWPMYGPDDLEEGIVAQPLSWPASGLLVSPATSSRRRARL RCWLAS >gi|302034491|gb|GL383260.1| GENE 82 77006 - 77395 272 129 aa, chain - ## HITS:1 COG:MT1761 KEGG:ns NR:ns ## COG: MT1761 COG4113 # Protein_GI_number: 15841182 # Func_class: R General function prediction only # Function: Predicted nucleic acid-binding protein, contains PIN domain # Organism: Mycobacterium tuberculosis CDC1551 # 3 117 2 116 129 68 33.0 3e-12 MTLVVDASVLAEMLVGSTVGHAAWQQWGGEEFIAPQHLPAEIAHVVRNLSLGHLITDAEA MRILSDFRAFKVELYPVEPLMVDAWEMRHNVSAYDALYVVLARLLGACLLTCDRRLAVAA PDVAVVPTT >gi|302034491|gb|GL383260.1| GENE 83 77392 - 77619 130 75 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5125 NR:ns ## KEGG: HMPREF0675_5125 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 75 1 75 75 103 100.0 2e-21 MATIQIRNVPEETSRELKARAALQGKSLSEYTLEVLQNTLKNPSREQLMQRIMAQTARTD LPPMVEVLQEGREGR >gi|302034491|gb|GL383260.1| GENE 84 77649 - 77813 122 54 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5126 NR:ns ## KEGG: HMPREF0675_5126 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 3 54 1 52 52 90 100.0 2e-17 MHMVLSASATTGSGVQDTGIKFRRFNPSTEMLQSHKLGQELVIKYQLLMTILGF >gi|302034491|gb|GL383260.1| GENE 85 78064 - 79182 670 372 aa, chain - ## HITS:1 COG:MT3500 KEGG:ns NR:ns ## COG: MT3500 COG1957 # Protein_GI_number: 15842986 # Func_class: F Nucleotide transport and metabolism # Function: Inosine-uridine nucleoside N-ribohydrolase # Organism: Mycobacterium tuberculosis CDC1551 # 61 364 4 298 308 209 42.0 9e-54 MCGTYPLDNEGAGHADVRVLEQRRSDQPEQPQQKVRWDDSTIGGAVEGLYSDAMPTRFLP VLLDCDPGIDDAFALAYLASRDDVETVGVVTTAGNVGQDDVLRNALGLTELLGMDAPVAR GADAPLVEPVMTAEETHGPHGLGHAQLGDCGRHPDGRSGAQLWVDLARKYPGELVGIVTG PLTNLALALREEPDLPQLLRGLHVMGGAINHRGNTGPTSEWNIAVDPEAGHEVFEAWGKA SKRVVLGALQATEVIRLDERDRRAVKELGEHPVVKVLADALRFYFEFHEADGLGWCAYLH DPLVVANAVTGRFATTRPLAVDVELTGTLTRGQTVGDELGRWGKEPNVDLLCEVDAEGFI EHLLTTLRTGLG >gi|302034491|gb|GL383260.1| GENE 86 79141 - 79356 93 71 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5128 NR:ns ## KEGG: HMPREF0675_5128 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 30 71 1 42 42 78 100.0 8e-14 MSCPLIVQRVCATHFTVPWCRPARILEGIMLDWVDLIIRIGVGVGPGTLIEIGADGFGAT DPPYPPYGHVS >gi|302034491|gb|GL383260.1| GENE 87 79481 - 79897 356 138 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5129 NR:ns ## KEGG: HMPREF0675_5129 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 138 12 149 149 216 100.0 2e-55 MTIEEKEPSRAERILAGTVAFTICMAVVFAIVAIFIGWRWSLRMFVGVLLIGIPGEILLE LVGENRMFPRGGGKPGQTRAARLLILTLILAAWALIVLALTALIQPWYGAVGEIAWVMVI GILAILIQGIRDTRKKKS >gi|302034491|gb|GL383260.1| GENE 88 79894 - 80055 75 53 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5130 NR:ns ## KEGG: HMPREF0675_5130 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 53 1 53 53 102 100.0 4e-21 MSAHFDMEIHDDEFQSGVPADKQPTVSDVLSTWRERYKRPPGRSLGAVIMARG >gi|302034491|gb|GL383260.1| GENE 89 80264 - 80740 504 158 aa, chain + ## HITS:1 COG:BS_yrkC KEGG:ns NR:ns ## COG: BS_yrkC COG0662 # Protein_GI_number: 16079709 # Func_class: G Carbohydrate transport and metabolism # Function: Mannose-6-phosphate isomerase # Organism: Bacillus subtilis # 3 131 53 181 186 151 54.0 5e-37 MKINDNGPKPNAFDIETATKENTNYRTTAWTGKYLQVTLMSIPVGESIGLEAHPDTDQFL RLDSGKGRCVMGPAEDQLDFQQDVSDGWSAQVPAGTWHDVINTGDEPMQVYAIYAPVHHT PGIVQETAAKAEEDEKSGADVPPEWSVQPDKTADDLHA >gi|302034491|gb|GL383260.1| GENE 90 81052 - 81696 518 214 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5132 NR:ns ## KEGG: HMPREF0675_5132 # Name: not_defined # Def: transcriptional regulator, TetR family # Organism: P.acnes_SK137 # Pathway: not_defined # 1 214 8 221 221 395 99.0 1e-109 MISKRPGRKPAFTRRQAIDAALAEGIETFTLRAVADRLGVKATALYREFSSRQELQLAAI AEIAVDIEPDPDFSNWQDALRQVVDRQWALCERYPEAPLVLMAQPEAFGAAMPRIAAIVQ RLAELGVPGGVEGAAFAFDFVGDATLETFVSIQPYLTADEGGRTGVERIGEMTAGHPDVF GVQSMGERGNLDLKVEFIIAGMELGLFPGSVAQK >gi|302034491|gb|GL383260.1| GENE 91 81693 - 83486 186 597 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 349 571 279 507 563 76 28 9e-13 MTTTMNSRLSWAGDILLLNTFRPLLTEEGAAKFRRSLWLAGLQGTLEGVGLFAVIPTITA FVEGGSSMGLTWQGWVWVLAALAVAGAVVTYFQSTIGYLAAMDVMGKLSVRIGDQVASLP LGWFRSSFLGRLSRLLIQGLMHLGEGLAHFTAPLVRGAATTVVMMVLSWFWSWQLGLSLL ISMPAMCLIMIASRALWLRGESVVQPTEQELAARIVEFCETQPVLRAAGRAEGYEPLRNA RRANERAARKCLGLGVTANFLSGLGAQPVAVVLIVLAARMGSNGTLAPVATVAFVGVSLR YAKVLEDVVSAALSVETARKPVSEVDEILSAEVLPEPEAPSDMTAPGEVSLEDVSFGYDK EHPVVHDVTFTAPAGGLTAIVGPSGAGKTTLFRLMARFWGVDLGTVRVGGLDVRDQTTEQ LMSQLAMVFQDVYLYDSTLAENIRIGAPDATDEQVWKAGSLAGVDEIAARLPGGWDASVG EGGRRLSGGERQRVPVARALLKRAPILLFDEATSALDPEDEAHVEAALAQLRESSTILVI AHKLDTIRSADRIVVIDRNGRVCQVGTHDDLIASGGVYADLWHARERAEGWSLVGRE >gi|302034491|gb|GL383260.1| GENE 92 83483 - 84331 216 282 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 48 262 137 351 398 87 31 3e-16 MAWGYQQAGNAALRLQDVLSIEQISHPQVSVRIPDDMTVTFDDVSSSYLTPDGVIPALSH VNLTLRPGTVTALVGPSGSGKSTLATMLARFRDPDSGVVRIGGVDLKDVAQNDLYRLVSF VLQDPYMQRRSIRDVITLARPDATDDQVREAARAAHILDDIDALPKGFDTVLGDDTDFSS GQKQRLSIARAVLADAPILVLDEATAATDPDCEAEIQQALAALARGRTVLAIGHHAESVA GADVICVMENGGIAACGSSEELADQPYWARLSAGRAMEGATR >gi|302034491|gb|GL383260.1| GENE 93 84377 - 85303 965 308 aa, chain - ## HITS:1 COG:YPO0771 KEGG:ns NR:ns ## COG: YPO0771 COG1132 # Protein_GI_number: 16121084 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Yersinia pestis # 47 273 24 251 590 93 25.0 5e-19 MSKTSTSPQVCPGAAAPEDIRDYQTKHRAGGKALSSIMKPIREYVLIARILVIASCIVAL APYVALTRLGAILLGDHVDHEALTRTANVLWMAFCLQALLYVLALVITHIADIKLRNILQ DRIIDRISKAPLAWFSSSSTGRVRKAIQDDTVQIHMLVAHAPVEQTAAVGVPLVLLVYAF VVDWRLGFLSLAPFPIYALLQWVTMRDMATKTAEMDDKLADISSSSIELTEGIHVVKNVG QTGKAHRRFTRACEEFARFYWDWCGPLIKASALSLSVISVAALMAINLRFGLLMAKAGWV GVTDVPTC >gi|302034491|gb|GL383260.1| GENE 94 85300 - 85488 207 62 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|332676463|gb|AEE73279.1| ## NR: gi|332676463|gb|AEE73279.1| hypothetical protein PAZ_c21560 [Propionibacterium acnes 266] # 1 62 14 75 75 89 100.0 6e-17 MARAMAGSALTATHRPRTRGFHGAVDPRTLFLYVIVFLLGLAGGWLGIKVGRKHFQRAGL TK >gi|302034491|gb|GL383260.1| GENE 95 85798 - 86481 648 227 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5136 NR:ns ## KEGG: HMPREF0675_5136 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 227 1 227 227 393 99.0 1e-108 MGIGSNIGKALLAQAPDMAPGAAVSMLRSILGFAIDGASSLPGARQAAGKTLTKHDGDVE QAISSLVNQHIAMAGAQGFVSNLGGVVTLAVTIPANISGVAIVQARMVAAIAHLRGYDLD DQRVRTAILATLMGQREVDSLIHEEKLPTTPMGIATAPVGDADLEKVVARNLVNVLMGQV AGKKLPVFVSKRVPVLGGGVGATTDGFTTWSVARYARKQFPTRRPRG >gi|302034491|gb|GL383260.1| GENE 96 86512 - 87783 728 423 aa, chain - ## HITS:1 COG:MTH749_1 KEGG:ns NR:ns ## COG: MTH749_1 COG2966 # Protein_GI_number: 15678775 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Methanothermobacter thermautotrophicus # 23 234 15 227 247 80 28.0 9e-15 MGPGVDELDENGVRRLLAYVAAAGIAGGQPVHEVEADTRSVGRYLGCPDVQVQGWPTGVV VSLGGGTPATFESVEGTIRLDQSATTARIRQQLLDGTIGPVEALEQLRDLRSIPPRYPRL GLHGGMVCVASGIALVLQPLWPSVLFSVLAGQVTAGFIWLSGKRKALAVLTPFLAAFVVA LCAFWVARLGLIEGPLRSLLPPIAVLLPGALIVTGVAELAAGAMMAGASRLGFGTAQLAM FTAGVLGAAWLTKVPVDQLNNQIIPWRGLWVPFLGVLLLTAGMSLMESIPRYLVPWVALM LATTLTFQIIGQTVAGATWGGGLLGATVASFGSSVIEMHRPRLPRLVLFLPSFWLLVPGS LGLVSLTQLGAGTPVAGATALESTGIIGSIALGLLIGTTAARAVGLLRRSRTRRPGARRR QTF >gi|302034491|gb|GL383260.1| GENE 97 87862 - 88566 385 234 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5139 NR:ns ## KEGG: HMPREF0675_5139 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 5 234 1 230 230 350 99.0 3e-95 MMSIVTFLKGRHAVALVAVPVAAVVVAFFLWKTRLSVASGDVWDRPVTGLELTSLVGCAT IMWCVSSGMGWVERASIRSLEIGYGSMGLWICLCAAALPLLTGWILRSLPVELIPDGDSV LVPEMPARFQLPWSPFIGFSVTCLLCTGVALFATGVLSRKSGPLCGPLAYLIMVVAQSNT FLRFLPGGYLGQTAAVEGSVRGVSVVAVVCAAVCALLGVVGYARGLGGVKSLRP >gi|302034491|gb|GL383260.1| GENE 98 88563 - 89915 506 450 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5140 NR:ns ## KEGG: HMPREF0675_5140 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 52 450 1 399 399 728 99.0 0 MSVSPRDIRPLRGLHRVAFPFPSWYAILVTASGAVCSLIALRGSWSWGVWQVQDVTVTIR ESSMLWAIVAGLIGAGSAARMAPSDMIVGVAPARSILSIHWHWFWRQAAALLIGTVVVAA PLVVKAWINASPTAPEVADLIVVLLSFPALVAVAHLVAAMVSHPIVWVVAPVVCIAVVGI PVLVNENLFANTGYGSVAFAWSMDMAEPSGNHTATASAVTMRTIFFCIVSVSCILAASRW STVRSGGFTWRRVVPCVALVAPPLIIAALGVVMPVPLFRDAPLAFGCSSHEDVRVCVMPA HRSLALSYAQPAQRVVSVMPPTAVPHDVLLAEPGYHARSKQFVMDLGHATVYDSAQQLSD MTAQGLAQSFSGQDACTFSTEMTPQQIEAFDGVNSVERTILRLAGFQYDDAPSSERNDLD GMDVTAFRQWYTHHRQAIEGCSLTSSDLHR >gi|302034491|gb|GL383260.1| GENE 99 89915 - 90649 270 244 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 217 1 226 245 108 31 2e-22 MIELEHISHRYRRRRSLVDISCEFDSGLWGLLGPNGAGKSTLLSILATLREPESGHFRVN GVDVSDDVNTIRSMVGFLPQRFSLPLHFRIRRAVEYAAWARGVEPRECCVRAGAALDRVG LVDRADDRVQSLSGGMRQRLGIACAIVGDPAVLLLDEPTVGLDPASRIGVRSLLGELAED RTVIVSTHLLEDLQEFVSQLAVLSEGELIFEGSYSDLESVGQKHPVRNANDAEAGYLTLL GEAA >gi|302034491|gb|GL383260.1| GENE 100 90650 - 91027 217 125 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5142 NR:ns ## KEGG: HMPREF0675_5142 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 125 12 136 136 206 99.0 3e-52 MRSRKELVSTIVLGVMTVSAGMTMIAGQANASHCSLFANKPVQHGTTMSGTGGRQSCADT VGSVAVPEYHQISHWPDSRMASARRTNVKNASLTVTGHGKHGWDVYTRVDSSTGAQTKSG YTRVG >gi|302034491|gb|GL383260.1| GENE 101 91014 - 91232 57 72 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|315109556|gb|EFT81532.1| ## NR: gi|315109556|gb|EFT81532.1| hypothetical protein HMPREF9602_02338 [Propionibacterium acnes HL030PA2] # 1 72 1 72 72 122 100.0 1e-26 MRDLISITIFSTKDATRLHSHNPYLQGSGHNITYPPLWPVNPLRPVVPVKTRGHSSSAMA RDDHTLKQPRPR >gi|302034491|gb|GL383260.1| GENE 102 91273 - 92682 1041 469 aa, chain - ## HITS:1 COG:BS_pdhC KEGG:ns NR:ns ## COG: BS_pdhC COG0508 # Protein_GI_number: 16078524 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes # Organism: Bacillus subtilis # 1 463 7 435 442 214 33.0 2e-55 MPDPGEGLTEGEVVSWRVSPGDTVKINDVLCEVETAKSIVELPSPFAGTVAKLCAEPGET VAVGEPLVTIDDGSDDQPEEEPEFLVGHLTAESGRRRRRRRGAAVSAERAPEKAPQTPTL KTGPETDVEPVPEPVQPTQPRRQDPPRMDRAGHVLAKPPARRVAADLGIDLSTVTGTGPQ GAVTRSDVKAAAEAGRQAAPEPPVVGASAGDAEFATLSVMSRRLLGGAPTEPDGHTRRVP VRGVRKVTAKAMKDSLDTKALVTAFLTCDVTPTMDLVARLRADRRFKGLRVSPLTIWCKA VCLAMGRTPVVNARWDDAADQIVFRDQINLGIAAATPRGLMVPVVRNAQDMTMLELAEEI TRIVAIAKEGKLQPTDYTDGTFSITNVGVFGLDAGTPVVNRTESAILVLGTIARRPWVVG TGDDEEVVPRWVTTMSLGFDHRLIDGEEGSTFLHDVAEILSDPASAMLY >gi|302034491|gb|GL383260.1| GENE 103 92715 - 93719 741 334 aa, chain - ## HITS:1 COG:MT2571 KEGG:ns NR:ns ## COG: MT2571 COG0022 # Protein_GI_number: 15842024 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit # Organism: Mycobacterium tuberculosis CDC1551 # 16 332 27 345 348 337 53.0 3e-92 MSEEVLRSARPQGETTLAKALNAGLSDALAADDRVVLMGEDVGTLGGVFRITDGLKAQFG GRRVIDTPLAESGIVGTAIGMAMRGYRPCVEIQFDGFSAPAFDQIVSQLARYRARVGGRW SLPVTIRIPFGGGVGSPEHHSESPEGFYANTPGLKVVTCSNPDDAYWMLRQSIDSPDPVI FFEPKRRYYTRGHVAQTPTLGLHQARIARSGEEVTLICYGPMVDTCLEAAKEASQEGRKL EVIDVRSLSPLDMATVYESVRRTTRAIVVQEAPRTQGVGAEIAARLGEELYYVMEAPVLR VTGWSTPYPPAKAEGEHIPDVDRILDAVDRSLAF >gi|302034491|gb|GL383260.1| GENE 104 93719 - 94864 863 381 aa, chain - ## HITS:1 COG:MT2572 KEGG:ns NR:ns ## COG: MT2572 COG1071 # Protein_GI_number: 15842025 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit # Organism: Mycobacterium tuberculosis CDC1551 # 32 374 20 359 367 241 43.0 2e-63 MTETICADEGGTDPFVLPARQHPVNRPDPAMVRILDEQGRLTTHPDFPVDLVDDDLVKAL EMMVMTRRFDVEATALQRHGELGLWPPLLGQEATQAGAWLALREGDQVFPTYREQGLAHA MGVSLADILGAWDGTSHCGWDTVATHFSAYPVMIGSGTLHAVGYAMGVQRDVEAGGDPAA VLDFHGDGAMSEGDTNEAYVFAASMNAPVVFVCVNNQWAISEPTTVQSPTSLFRRATGFG IPAVQVDGNDVIAMMAVLRSALEYARSGKGPVFVEAWTYRMGAHTTTDDPTRYRTAEEES TWGKTDPIVRLRTYLQNRGIINQVWLDGLAEREDAFGAEVRAAVHENATPVMADLMADVY AEPTPDVLADAEEIASWEEDK >gi|302034491|gb|GL383260.1| GENE 105 95053 - 96423 764 456 aa, chain + ## HITS:1 COG:SA1650 KEGG:ns NR:ns ## COG: SA1650 COG1232 # Protein_GI_number: 15927406 # Func_class: H Coenzyme transport and metabolism # Function: Protoporphyrinogen oxidase # Organism: Staphylococcus aureus N315 # 1 453 5 465 466 145 26.0 2e-34 MAVIGAGMTGLAAAHHLHSHGCRPVVLEAGQGVGGQVRSRRLGSDVVDMGPEAVPLRAPG VAALVAELGLTDSMRHPVPGRVLLSSRRGVVEMPSGVTPVGPTKFLPTIASRILSPAGLL RAGLEPFNAHPHLDDVSVGQFIAERFGDEVSRAVVDPLLGGIHAADLNTFSLAVAAPALE QTVRNGDSIVAGTLKRNAAGRWSQLRHHSQRSGPRTPATATWKHGLMMLPEALARELTIH TNTRARGIRQVGHEWVVDVTGPHGVGSVAVDDVIIATPARVAGALLATACPRASELLSQC ESTTVATLVMQADLTDHPIATAQTWFIGSAWSALVRQVTNLSTTWHLAKPTFRIAMGRQR GTPIDDLSDDDLVAMSVAELRRLGLALDPHDYVIERHRGAMPQPAPGHRERMAQLAATLN GTGLHVGGAGIDGAGVGTAIAAGRRLARHITSKEEN >gi|302034491|gb|GL383260.1| GENE 106 96423 - 97703 810 426 aa, chain + ## HITS:1 COG:APE1655 KEGG:ns NR:ns ## COG: APE1655 COG0535 # Protein_GI_number: 14601539 # Func_class: R General function prediction only # Function: Predicted Fe-S oxidoreductases # Organism: Aeropyrum pernix # 45 416 10 382 403 307 43.0 3e-83 MTITEHPDHLTRPGSAPTGHPGGHPGGHPGHSPLVREIKHDLNNKPFIVIWEVTRACALV CQHCRAEAQHHAAPGQLTNAQGHELIDQLTSYERPYPMLILTGGDCFERPDLVDLIEYAV SKGLHVSISPSVTPLFTRDRVRAVQEAGVSMMSMSLDGGSATTHDAFRGFPGTFDHTVEA CHMLRELGMKFQLNTVFTAKNIHEAPQMLKNAIDLGAMMFYTFMLVPTGRGAQLDMLSPL EREDVLYWLHDNSTRIAIKTTEAPQYRRIAFQRDAVRQGKERPVRHGELYEWLTRETNEL LGETITEPRPPRTPLAINSGSGFAFIDHTGDVYPSGFLPIHCGSIKETPFPEIYCGSPVF QGLRNPNGFSGKCGACNFNHFCGGSRSTAYALTGDYLASDPSCAYVPPGYDGELPEGVPA EGIPQI >gi|302034491|gb|GL383260.1| GENE 107 97973 - 99055 1016 360 aa, chain + ## HITS:1 COG:Cgl0328 KEGG:ns NR:ns ## COG: Cgl0328 COG0737 # Protein_GI_number: 19551578 # Func_class: F Nucleotide transport and metabolism # Function: 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases # Organism: Corynebacterium glutamicum # 50 307 36 297 694 134 38.0 3e-31 MNHRRRARIIGLSVLCMAAGSFVAKPDFAAPSTSGTSSAPVASCNGDKNVDIFNFNDFHG RIATGANLFTPVVEARNANGADKVLLLDAGDNVGGSTFESGSLNDEPTIDVLNAAGVDAN AVGNHEFDKGWKDLAERIVPHLNSPYLGANVYEKGTTKVAAPLKASTIIVKDGVRIGVVG AVTHDLPSLVSPAGISNLTIGDPVKAVNAEAKRLKSEGLADVVVAEYHEGAADGSGDAAS QGGNFAPVYADTSTDVDVVFNGHTHQVYSWKDKAGAPLLQAGSYGQHLAKVNVAWNSQQK KLCSTGASFIDPATTPADDPTIAKISSIYDDAKAKSDKAGTTVIGHETAPITTPSNTSDQ >gi|302034491|gb|GL383260.1| GENE 108 99089 - 99424 171 111 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5150 NR:ns ## KEGG: HMPREF0675_5150 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 4 111 1 108 108 195 100.0 6e-49 MTNMVADMFKDTLGKDDPNFIGLQNPGGTRASLLDKDITYKQAAQVLPFANTLTTTRITG AQFKKVLEQQWQRAGTARSRHVHTCSSACPRTSPTPTMSPARRANASPPCG >gi|302034491|gb|GL383260.1| GENE 109 99298 - 99735 340 145 aa, chain + ## HITS:1 COG:Cgl0328 KEGG:ns NR:ns ## COG: Cgl0328 COG0737 # Protein_GI_number: 19551578 # Func_class: F Nucleotide transport and metabolism # Function: 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases # Organism: Corynebacterium glutamicum # 8 106 436 530 694 83 44.0 2e-16 MATRRDGEVPSRPYLQLGVSSNVTYTYDESRKEGERITSVWVNGKPIDPKGTYSVGSGSF LIAGRDNFTELAKGSKPVDSGKINLSAWVDWIKARKTLKPDFAKRAVSLTTSLHEGTSRD TTFTLGKPADKAVAPTPWISPPRML >gi|302034491|gb|GL383260.1| GENE 110 99747 - 100082 305 111 aa, chain + ## HITS:1 COG:no KEGG:PPA2097 NR:ns ## KEGG: PPA2097 # Name: not_defined # Def: 5'-nucleotidase/2',3'-cyclic phosphodiesterase or related esterase # Organism: P.acnes # Pathway: not_defined # 1 111 593 703 703 187 98.0 9e-47 MKAQIVQDDKTVDVATTPVKDGWSSVSVKVPTAKGLVSGEATTVFTFPDSGTTVRFAAKL SVPSGDHPGGAVIPAPKPGQSGTPGHDVNLGTPGSDKGSSNGKPGLPKTGV >gi|302034491|gb|GL383260.1| GENE 111 100014 - 100250 84 78 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|314981588|gb|EFT25681.1| ## NR: gi|314981588|gb|EFT25681.1| hypothetical protein HMPREF9577_01630 [Propionibacterium acnes HL110PA3] # 1 78 1 78 78 127 98.0 3e-28 MVVVAATIGSTHGHDRHFHHVGRLHLFAAPTQTHKNPGPGPPQARVFQYEVVSILGSDTS FRQAGFAVAGAFVRSGGS >gi|302034491|gb|GL383260.1| GENE 112 100296 - 100541 196 81 aa, chain - ## HITS:1 COG:PA4997 KEGG:ns NR:ns ## COG: PA4997 COG1132 # Protein_GI_number: 15600190 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Pseudomonas aeruginosa # 1 61 533 593 603 62 50.0 2e-10 MQRALGTIPADRTAVIITHRLSTVEIADWVLVLEHSQILENGSPAELEAQGGRYVGLHKP GRSHLPDGDVSEAHPESRRRD >gi|302034491|gb|GL383260.1| GENE 113 100788 - 101063 121 91 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5153 NR:ns ## KEGG: HMPREF0675_5153 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 91 1 91 91 167 100.0 1e-40 MGPTAACPPSSPHRHRCHAAACHGLATGPHLLASLFFVSPLVKWFSAESSRTFRKVRNAS AQVIIQLSETMTGIEAVQAYYREPRNQEIFT >gi|302034491|gb|GL383260.1| GENE 114 101081 - 101293 93 70 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313763741|gb|EFS35105.1| ## NR: gi|313763741|gb|EFS35105.1| hypothetical protein HMPREF9567_01930 [Propionibacterium acnes HL013PA1] hypothetical protein HMPREF9612_00053 [Propionibacterium acnes HL063PA2] hypothetical protein HMPREF9616_00938 [Propionibacterium acnes HL007PA1] hypothetical protein HMPREF9598_00620 [Propionibacterium acnes HL050PA1] hypothetical protein HMPREF9600_01021 [Propionibacterium acnes HL050PA3] hypothetical protein HMPREF9566_00136 [Propionibacterium acnes HL045PA1] hypothetical protein HMPREF9594_01288 [Propionibacterium acnes HL005PA1] hypothetical protein HMPREF9610_01285 [Propionibacterium acnes HL027PA2] hypothetical protein HMPREF9601_02531 [Propionibacterium acnes HL030PA1] hypothetical protein HMPREF9602_02324 [Propionibacterium acnes HL030PA2] hypothetical protein HMPREF9570_00109 [Propionibacterium acnes HL043PA1] hypothetical protein HMPREF9586_00116 [Propionibacterium acnes HL083PA2] hypothetical protein HMPREF9579_00110 [Propionibacterium acnes HL087PA1] hypothetical protein HMPREF9588_01187 [Propionibacterium acnes HL025PA2] # 1 70 13 82 82 94 100.0 2e-18 MRWSSAARFSSAVDISKVLSRSAFPSVAINLLSRILHGLAGHPPAQRRRRSAALGTPGLS PRAPSACRRG >gi|302034491|gb|GL383260.1| GENE 115 101340 - 101543 232 67 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5155 NR:ns ## KEGG: HMPREF0675_5155 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 67 32 98 98 128 100.0 7e-29 MANVTYTEDAWTLITVRYPDVESVRQLLYLGDHIRILNPAEAVEQFHDLAAQIMRAHSTN SSTNVSG >gi|302034491|gb|GL383260.1| GENE 116 101731 - 101919 62 62 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|327448553|gb|EGE95207.1| ## NR: gi|327448553|gb|EGE95207.1| hypothetical protein HMPREF9570_00111 [Propionibacterium acnes HL043PA1] hypothetical protein HMPREF9581_00140 [Propionibacterium acnes HL087PA3] # 1 62 1 62 62 99 100.0 1e-19 MRGVPIDVGHEIPGASLVHEPVRVRGEPLPAGFSAPSVAQADATSLSRCGQQAEFLSGRE PP >gi|302034491|gb|GL383260.1| GENE 117 102383 - 102745 277 120 aa, chain + ## HITS:1 COG:SMc02901 KEGG:ns NR:ns ## COG: SMc02901 COG0346 # Protein_GI_number: 15963979 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Sinorhizobium meliloti # 1 120 1 121 122 58 31.0 3e-09 MSAPNLFLTYVSDAKRSTAFYSDLFDIEPNFTSPRYVAFEVTPGVLFAIWTGQRGHHPRH APHERDRTHGPRSSAAVDDAYREGVAKGVHVIEEPHDDVFGRTFVIANPDGNLIRVSPVD >gi|302034491|gb|GL383260.1| GENE 118 102794 - 103102 214 102 aa, chain + ## HITS:1 COG:mlr5757 KEGG:ns NR:ns ## COG: mlr5757 COG2801 # Protein_GI_number: 13474791 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Mesorhizobium loti # 1 94 158 251 263 92 47.0 1e-19 MERVLSDNGGVYRSHLWRNTCNELGIKHKRTRPYRPQTNSKIELFHRTLADGWAYARCYI SEAERRGKLGDWLHYYNHHRPHPACGNQPPFSRLTNIPGQFT >gi|302034491|gb|GL383260.1| GENE 119 103280 - 104299 847 339 aa, chain - ## HITS:1 COG:Cgl0080 KEGG:ns NR:ns ## COG: Cgl0080 COG1075 # Protein_GI_number: 19551330 # Func_class: R General function prediction only # Function: Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold # Organism: Corynebacterium glutamicum # 71 310 70 308 324 102 30.0 1e-21 MKINARFAVMAASVAVLMAAAPTAQAVTSPGDIHPLVQAAHSPDGIPGNGVGPEFHTSSM ARSYSEKHLGVAPRGVNDFSCKVKPGDRPVILIPGTGGNAFATWSFYGPHLAHEGYCVYT FTTNVPVGILDEGWGFTGDVRASAQALGAFVDRVRKATGSEKVDVVGHSQGGGILPNAYI KMYGGASKVDKLIGLVAANHGTTAVGLYKLVDGLPEAVKDFLSTWSYDHNMEAYGQQLKG SALMQQVYRDGDTVPGIAYTVISTRLDTTVTPYTQAFLKGAKNMTVQDACPLDAYGHGRL PYDPVAYQMVLNALDPNHPREISCTWRPRVLPVSTTDAA >gi|302034491|gb|GL383260.1| GENE 120 104893 - 106395 970 500 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5160 NR:ns ## KEGG: HMPREF0675_5160 # Name: not_defined # Def: cellulase (glycosyl hydrolase family 5) # Organism: P.acnes_SK137 # Pathway: not_defined # 1 500 1 500 500 978 100.0 0 MRRKSALGFVALSLFATGMGVATAVPATASPEDTAAPVRVDASRWTTQGRWVTDAQHRVV ITQGINEVAKSAPYAPDAVGFGEDDAAFLEAQGFTSVRLGVLWAGVEPRPGVYDDAYLAR VERTVRILNAHGIASVLDFHQDMVNEKYQGEGWPAWAALDHGMPNIVKTGFPGNYFLNEA VKYSFDSFYDNAKASDGIGVADHYASAWRHVAEHFRNVPGVQGYDLFNEPFPGHRYTRCL TQLGCRAADARLSAVQQKTVDAIRSVDKATTVWYEPMQFFNIGVGTNVRLTGSNLGLSFH DYCTSQATLHSYVGCTAPDNRVFTNAEKHSRQTGSGLMLTEFGAITTPAVITSQMDLAAR NRVGVQWWAYTAGDPTTAGPGTEQALVDDPARPPQGTNVESAKLALIAVPHPDRVAGTPS AYHHDRSRRVFTMTWTAQRPDGSSAEESDETTVVVPAISAPHGYDVQASGAHVTSHPGDR VARLHLNQGSTTAKVTITLR >gi|302034491|gb|GL383260.1| GENE 121 106267 - 106524 99 85 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGAGGGAARCIPRHEKDRPTPRGRAGRKSVWETYRSVLKTLEGLAQGDRDLRRGTALVEV QPRHPVAWVGGDVGAGRLHVVPVGR >gi|302034491|gb|GL383260.1| GENE 122 106763 - 107200 300 145 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5161 NR:ns ## KEGG: HMPREF0675_5161 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 145 1 145 145 233 100.0 2e-60 MTDVQRRVVITEGINVEGVKLALIAVPRPDRVAGTPSAKPPTVTNLPTAGVVSAMGLYLL TASNVLTLVGGVAASCLFLILAVSLAVVVVRFNALLTPHAHALQVTLEWLTVLVALILGI TRQWTRIYRVYVNGKTERFHHALTD >gi|302034491|gb|GL383260.1| GENE 123 107470 - 108285 912 271 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5162 NR:ns ## KEGG: HMPREF0675_5162 # Name: not_defined # Def: CAMP factor (Cfa) # Organism: P.acnes_SK137 # Pathway: not_defined # 1 271 1 271 271 434 100.0 1e-120 MKRSALIIPILTGAVLAPVAPAVAVAAPAPVSQSAARQHAQVDAEQALAQVNARIAELHK MPQAQVPASEAPKVNYGEEIRKLLDTAFELRTAIESIIAGKVPPVDLSTIPARVDLLTTS VKTIQQANHNLVNKVEAAHVELGFSITRALIRTINPTSTAAQLAESKADVLSTYAKVAAY RDLKPTDAATVYVKNGLNTKIWQTRINRDKYLLGKNAEGYKAINKALTHATGVWFNPATT VKQVDDEVKALDLAFQATLDRGPADGKLRTN >gi|302034491|gb|GL383260.1| GENE 124 108442 - 108735 179 97 aa, chain - ## HITS:1 COG:no KEGG:PPA2109 NR:ns ## KEGG: PPA2109 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 97 162 258 258 151 92.0 9e-36 MPVGVTSQDWATQLGLDTAAPWRTGALDVTRQATASGHFVNARCYTSETERRSVLDSGST TTTNTARTLLGNDAERLSTLHRLDAFTAVTVPERSRL >gi|302034491|gb|GL383260.1| GENE 125 108977 - 109468 389 163 aa, chain + ## HITS:1 COG:MT2293 KEGG:ns NR:ns ## COG: MT2293 COG0394 # Protein_GI_number: 15841726 # Func_class: T Signal transduction mechanisms # Function: Protein-tyrosine-phosphatase # Organism: Mycobacterium tuberculosis CDC1551 # 14 159 7 153 163 108 41.0 6e-24 MEGTPVSNQNTSSVIFVCWGNICRSPMAEFVARKVFANEGLDARITSAGVSDEEHGGPMD SRARSVLKSHGYPCSGHNAHQIDGSEIMSADLVIAAEPRHIQMMKRMAPDADNLRLIRDY DPNCTPGTSLPDPWYGSADGFEDTLDAIEAAMPGIVDEVRSLA >gi|302034491|gb|GL383260.1| GENE 126 109532 - 110626 967 364 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5165 NR:ns ## KEGG: HMPREF0675_5165 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 364 1 364 364 586 99.0 1e-166 MSLFLVGGGYDDSLVEVYDEFVSQARHHNADAPIALVVAGPPSESADHAAELTRIVTSRW VDANILTIHLDGPGTAPTVGDPATPLWAEDESFQLPDNLDALAGIIVDGGAVPSYINGLA PAAEQLSMLVRGGAPWLGFSAGAMAPCVTALAGGWKLQGRQVGQQTGAEGFDEVTFVEGL GLVSLTISTHNDTLSGDGLIISNVESGLLSSAVAVDEATCLRIDASTGHTEVMGRGLVRW FTREVNGVLVRSQRSVTPETAPAPHKPRFDGLAKVAAATRAAHDKEERAKAARQRAEERR RARKSKSADDETKTSEGSATPEDAPASAANPQAAADPTPTAGPEPDPLSDADPTAQPPTE DVKP >gi|302034491|gb|GL383260.1| GENE 127 110623 - 111321 550 232 aa, chain + ## HITS:1 COG:MT1009 KEGG:ns NR:ns ## COG: MT1009 COG0745 # Protein_GI_number: 15840406 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Mycobacterium tuberculosis CDC1551 # 1 229 1 227 230 294 69.0 8e-80 MSMHILVVDDDRAVRESLARSLQYSGYEVDSAADGVEALAHLSGTHPDAVIMDVMMPRLD GLEATRMLRSNGNDVPILVLTARDAVDDRVDGLDAGADDYMVKPFALDELLARLRALTRR SRPEPEQNEAPEQLSFADLTLDPGTREITRGNRRISLTRTEFALLAVFLQNPEKVLERWW LLHEVWGFDFPTTANSLEVYIGYLRRKTEHDGEPRLIHTVRGVGYVLREANS >gi|302034491|gb|GL383260.1| GENE 128 111378 - 112748 734 456 aa, chain + ## HITS:1 COG:ML0175 KEGG:ns NR:ns ## COG: ML0175 COG0642 # Protein_GI_number: 15826988 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Mycobacterium leprae # 4 449 23 469 519 231 38.0 3e-60 MGRRVSLLVSTSVVVAVALTSLSARLMTRISLYSELDEQLTRMATTISPSVAADPQNLGG LEASSLAATNTTLILVRADGQVTTAPGTEVTVTAGPQELAVARTGIGVKAHTVIDSRGVP VRIVAVPFTSDGVHYALVTGQDLTGTRATLGSLWIVLVGTGFVGIVLTAIAGYVAGNSAT SPLRDLSRAVHHVTTTEDLTPIQVHSHDELGDLAVSFNHMLSSLSNSRERQKQLIADASH ELRTPLTSMRTNVELLMADQKSHMLPEEARGEILDDVAAQLGEFSSLIGDLVQLSREDAP PPRPEYFDLSDAVSKAVERGRRRGPNLEFDVHLESHLVLGDEATLERAVTNLLDNAVKFS PAGGTVTVSMEGDTVVVSDEGPGIAEADLPYIFDRFYRSDRARNTPGTGLGLSIVAHTVT SHQGWIKASRAPSGGAMFTIYLPRAEPPVEEPTVSS >gi|302034491|gb|GL383260.1| GENE 129 112850 - 113362 203 170 aa, chain + ## HITS:1 COG:PAB0145 KEGG:ns NR:ns ## COG: PAB0145 COG1446 # Protein_GI_number: 14520430 # Func_class: E Amino acid transport and metabolism # Function: Asparaginase # Organism: Pyrococcus abyssi # 30 133 4 107 305 78 44.0 5e-15 MDKPLMTSTRNQPYDPVMTSHVVDQPGPTLVIHGGAGNVPSRTGEEAEKFRRSLRQAFAA GQRALDVSACDAVIAAVTAMEDDPLFNAGRGGVLTANGTVETDAAVMTGDGHAGAVCCSR HARNPIQLAHKALRIHPMCCCVTRPNGSVKTGVLRSRRRSTSSPKRAASS >gi|302034491|gb|GL383260.1| GENE 130 113263 - 113814 246 183 aa, chain + ## HITS:1 COG:AGl3520 KEGG:ns NR:ns ## COG: AGl3520 COG1446 # Protein_GI_number: 15891881 # Func_class: E Amino acid transport and metabolism # Function: Asparaginase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 2 173 138 310 330 110 41.0 2e-24 MLLCDPPERVCQDWGLEIAPPEYFVTQARREQLEQVLARRQHAPKHGTVGAVARDRYGHL AAATSTGGIVASSQGRIGDSPVIGAGTFARDGVVAVSCTGDGEAFLQGVVAHEVDAQMRL AGQPVDRAALGALTDEVSSRLTGHAPATDGLIAVDSCEQLVICHMSASMLAAWPDHGEVL TSV >gi|302034491|gb|GL383260.1| GENE 131 113821 - 114420 357 199 aa, chain - ## HITS:1 COG:Cgl2252 KEGG:ns NR:ns ## COG: Cgl2252 COG1443 # Protein_GI_number: 19553502 # Func_class: I Lipid transport and metabolism # Function: Isopentenyldiphosphate isomerase # Organism: Corynebacterium glutamicum # 19 188 6 173 189 160 50.0 1e-39 MSHHDGENVGTSADSGYDDFVILLDDDGNHIGTAPRATVHSQHTPRHLAFSCHVLDVGGR VLVTRRALTKVAWPGVWTNTCCGHPRVGETIIDAAVRRTHQELGLDLDPRRMRVVLPDFS YRATDSGGIVEDEFCPVVVARLSLPEELVELNPDPDEVEEVAWVGWQDMYGLARSMPALL SPWAVEQMLEFGPDLPVVR >gi|302034491|gb|GL383260.1| GENE 132 114554 - 115747 490 397 aa, chain + ## HITS:1 COG:ML2298 KEGG:ns NR:ns ## COG: ML2298 COG0265 # Protein_GI_number: 15828230 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Mycobacterium leprae # 1 394 6 399 401 159 31.0 6e-39 MAHILDITLAVILILRALRGWTRGAISGIASLIGFIGGVWGGLWASGDIVSRITNNSSSW LATGPLRFGVVLVIVEVIHGLCNGLARRICHASETAGLGALDRIGGALLSATATALVVAV GATALAPLLPPQWTQAIDESAVINTTNRAIPPQINHEAARLIGQMADTFPKVFTGQDPRL PGDAPDDSAANSPGVRQAARSIVKVRSLSHQCDRASEGTGWVSSPHRVVTNAHVVAGSDT VTVQVGGQGARLRARVVAYDPDLDLAVLAVPKLKAPALTMTSSVDAGDSTVIAGFPLDGP YTVNAARVRGAITARGENIYGDDDVVREILSLRGTVQPGNSGGPLLTTDGKVAGTIFARS TSQPQAGYALTNRETRQLIRSGTYGSTPASTGRCSVA >gi|302034491|gb|GL383260.1| GENE 133 115961 - 116239 351 92 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5173 NR:ns ## KEGG: HMPREF0675_5173 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 92 38 129 129 177 100.0 9e-44 MAVFIVETHYDPAHSEERMAARPAHLENLDVMRERGQLANAGPLADGSGAVLIYTVPDRD VLNHLLEADPYPKTAVQVTSVREWKPNYHHHV >gi|302034491|gb|GL383260.1| GENE 134 116367 - 117392 614 341 aa, chain + ## HITS:1 COG:Cgl2982 KEGG:ns NR:ns ## COG: Cgl2982 COG1902 # Protein_GI_number: 19554232 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Corynebacterium glutamicum # 1 340 6 343 343 315 51.0 7e-86 MCQYAVDSQDGIPSTWHLIHYGSFAVGGFGLIVAEATAVSPEGRISPCDTGLWNDAQVAA WRTITDAVHELGGTIAVQLGHAGRKASTEKWWPGFHGGVVPPEKGGWIPVGPTAAPADGK QYAGSPVTALNEDGISKIIDDFRTAASRAVVAGFDAVEIHSAHGYLLHQFYSPLSNTRTD GWGSDYDGRVRLPLAVADAVRGAIPDDMPLLARLSVTDWRDDGWSVEDSIELSRRFALAG VDLVDASSGGNSSAPIPVAPGYQADLAARVRAEADVPTATVGMIWTGELAEDLLNKGCAD AVMVGRAALRDTNWPLRAAHELGVPNEEAPWHPARFRGAWR >gi|302034491|gb|GL383260.1| GENE 135 117527 - 117712 109 61 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|314924364|gb|EFS88195.1| ## NR: gi|314924364|gb|EFS88195.1| hypothetical protein HMPREF9603_00143 [Propionibacterium acnes HL001PA1] # 3 61 1 59 59 97 98.0 3e-19 MYVYTSNYSTRLPIDPLTVFHTARYTSDSLRTDADLVLCASDISSPGIGGTASTRRAWRL R >gi|302034491|gb|GL383260.1| GENE 136 117699 - 118931 1085 410 aa, chain + ## HITS:1 COG:MT3580 KEGG:ns NR:ns ## COG: MT3580 COG0477 # Protein_GI_number: 15843086 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Mycobacterium tuberculosis CDC1551 # 1 402 37 438 449 442 55.0 1e-124 MYTYTTFAAYFEDQFFSPDDPHKSIYIYAIFWATFIMRPFGSWFFGRWADRHGRRSALIM AVTIMAVGSLVISVLPTRGTIGVGAPILLLICRIVQGFATGGEYGTSATYMSEASTKGHR GFFSSFQYFTLVGGLVTAQAVLLLLSSLMSEATIHAWGWRIPFFIGGVAALIVFFMQKTM DESLSTEHLKSVRSGEDSSSGSLKELFGNHLGNFLLAFTIASGGTLCFYVYTVNAPNIVH STFSSTPMAATAVNLIALFILMLGQPLGGLIGDRIGRKPVLLFFAAGGVVYTWVLVTCLS HARKPVTAFLMLLMGYIFLTGYTSISAVVKSDLFPTDVRALGVGMAHGFANSLFGGTAPL IYVWAKQGDAIPAFIGYVTALSAVTLLTILFGLTTRTASHLDAPTKGGHD >gi|302034491|gb|GL383260.1| GENE 137 119233 - 119424 76 63 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSPKTCQVWSRNRGARFAISREVSQRSGGPLSLPHSARSRAHGIARRNCNERRPHFDHPR PQA >gi|302034491|gb|GL383260.1| GENE 138 119381 - 121951 2237 856 aa, chain + ## HITS:1 COG:VNG2384G KEGG:ns NR:ns ## COG: VNG2384G COG0209 # Protein_GI_number: 15791174 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, alpha subunit # Organism: Halobacterium sp. NRC-1 # 39 791 28 771 804 557 42.0 1e-158 MSADPISTIRVRKRDGSLAPYDGNEVAASIMDSARGLDDAVARATLLQAEVEITLFDGMT TDALDEAVIQVALGNAKDDPAFDTIASRIAVKKLYKEVFGDTHDDLGDVDPERVQDLHRN YFPRTIAKLVADGHLDERLGRDFDLETLAAALDPTRDDLIGFMGVRTMINRYLLRTPDKQ ALEVPQYFWMRVAMGLSLTEDDPTSSALALYDSMSNLRHLAAGSTLVNAGTPSAQLSNCF VMRTEDNLEHIAQTIRDVMWITKGTGGIGLSMSDLRCEGSPIRSDNTASTGPIPFIHTFD STLRAVSRGGKKLGALCFYLENWHMDFPQFLDLRQNSGDPYRRTRTADTAVWISDEFMKR VAKDEDWYLFDPAETPDLTEITGSDFSKRYAQYVEQAEAGKIKRFRRTTAREQFRAILVS LQTTSHPWLTWKDSINTRALNSNTGTIHSSNLCTEICLPQDRDHTAVCNLASVNLAAHLA GPRGKRRLDWDQLAATTRLAVRHLDNLVDITASAVPQAQRSNEENRAIGLGVMGLTDMLE QIRVPYDSPDACEIVDRVVEFISWHAIDTSADLAAERGAYPMFEGSGWSRGMVPVDTLAV LERDRGIPVDVDRTTRMDWDALRAKVRTGMRNATLMAIAPTASIGLIAGTTPGLDPQFSQ MFSRTTSAGKFLEVNRNLVADLKDLGLWETIREELLRRQGDPSEIEAIPAPLRRLYRTSF TLDPMAYLNVAARAQKWVDQAISRNIYLASRSVGDMEDLYTAAWRMGVKTTYYLHMLPRH TAEQSTVAVNKAAGRRNGPRRGFATAVRRASGAATIRKPVTETLNASVEPVVSLDLIDGA SCPVDPQERQQCESCQ >gi|302034491|gb|GL383260.1| GENE 139 121986 - 122972 992 328 aa, chain + ## HITS:1 COG:CT828 KEGG:ns NR:ns ## COG: CT828 COG0208 # Protein_GI_number: 15605563 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, beta subunit # Organism: Chlamydia trachomatis # 13 325 31 345 346 230 36.0 3e-60 MILGSGIQEGLLLKPVTYSWAYDLYNQAVANTWFPNEIQLDEDLADFARMTPDEHHALTH LMSYFNPNELLVNKALAFGVYPYVNAAECHLYLAKQMWEEANHCMAFEYVLETFPIDRDE AYRSHIHVPSMARKEAFEVAFIKRMTEQTLDITTVEGTQDFVRNLIAYNIILEGIWFYSG FMVALSFRQRNLLRNFGSLIDWVVRDESLHLKFGMNLILTVLEENPEIATDEFAAEIHDM IVQGVEMEEQYNRDMLPRGILGMNADYVNDYVKYLADRRLEELGFEPEYRVANPAKWMAT ANDTLQVVNFFEATNTSYEVNAHATGSR >gi|302034491|gb|GL383260.1| GENE 140 124009 - 124824 751 271 aa, chain + ## HITS:1 COG:MT2776 KEGG:ns NR:ns ## COG: MT2776 COG1940 # Protein_GI_number: 15842240 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Mycobacterium tuberculosis CDC1551 # 5 243 21 256 265 214 49.0 1e-55 MNKVLGIDVGGSGIKGAPVDLEVGDFAEPRLRIPTPEKSSPENIVTVLREIVDNFAPTIG DGPVGISFPAPARHGVIPFIANLDQGWAGLHAEKYISDALGRPVTVLNDADAAGVGEVHY GAARGVPGVVVLTTLGTGIGSAVINNGILLPNTELGHLEIDGHDAEKRAASSVKDRKHMS YTDWATKRLQRYYEVVEMLFSPDLFVVGGGISKDHKKFFKYLKLETPMVPAQLLNRAGII GAAWQAQWRLEHPDATEEEVVKAAKKAKDAD >gi|302034491|gb|GL383260.1| GENE 141 124998 - 125609 419 203 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5183 NR:ns ## KEGG: HMPREF0675_5183 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 203 1 203 203 372 99.0 1e-102 MTKQEFILTFISVAISLVLLVPTLIYKIRRERKLPTGEPVPVTQGQRFMALLGDAMWVGL LTLAGWGLFSGATLGYEFNHVDQKSAIEQAIHPAGSALLLGINVGYVLISLVGRLGVSPG TNSRQLAWVDSTGRPAGRGHTFVIGLAFILSILGKTSVGVFASIGGTILFIEAVSVLTTK RGIIGKLMHVNLVDARCITPQPC >gi|302034491|gb|GL383260.1| GENE 142 125660 - 125782 204 40 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|213961087|ref|ZP_03389367.1| ribosomal protein L36 [Propionibacterium acnes SK137] # 1 40 1 40 40 83 100 7e-15 MKVRNSLRSLKNQPGSQVVRRHGRVYVINKKNPRLKTRQG >gi|302034491|gb|GL383260.1| GENE 143 126796 - 128070 837 424 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5187 NR:ns ## KEGG: HMPREF0675_5187 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 327 1 327 442 464 100.0 1e-129 MRRSRIAVAAATATALVGSIAAITPSPQAEASSNRPRSVAQAAIATDGKGIINKDCRDAV INDAKLRAAIAGALVKAGFSSADAVALAPRIAREMAKEGVLLINHHKLKALIGAQVGLLT DAKIQRAAAAVDLGIKATLAATIIPNALHSAAFKDAVVANLVAAGVDKKLAKATAVAIAA TALNPALGPIAKTEAIKAEIGAQAALLVSRGVHLKKAAIEHIIGRSFDAAVATAIVSSPI LNARIVTHLVRAGIDKSLAVQIAPRIIDRLAKEPLLALNTAKLMKNITRQIVDVITADKA IKTAEQLEKELPALDDLVKKACSCPKPTPTPTPTPTPTPTPTPTPTPTPTPKPTPTPTPK PTPTPTPTPKPKPTPAPAPTSGATSDESTSRSGGHSQGGSGTHYIHHGVAPVLTHSSDLP STGF >gi|302034491|gb|GL383260.1| GENE 144 128313 - 129983 1674 556 aa, chain - ## HITS:1 COG:NMB1506 KEGG:ns NR:ns ## COG: NMB1506 COG0018 # Protein_GI_number: 15677359 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Arginyl-tRNA synthetase # Organism: Neisseria meningitidis MC58 # 22 556 27 572 572 500 48.0 1e-141 MSSLPSQLAARIESAIGVDPQLRPATKPQFGHFQSNVALRLAKEEKRPPRDVAADIVAKL DIEDLCETPEIAGPGFINLRLRTDVLARVASDLVTDPNAGIAQAEKPERVVIDYSAPNVA KQMHVGHLRSTIIGDCFNRVLSAQGHTVIPQNHIGDWGTQFGMLIEYIVEKRMDVEDFDL SGVEQLYQDSKKTFDADPQFADRARRRVVKLQGGDAETLRIWRTLIDISLEGFNATYARL SVLLTDEDVAGESSYNDDLPRVVDELVADGLAVEDNGALCVFVEGQDAPMIVRKRDGGFG YDATDLAAIRRRVGKLKADRIIYVTDVRQSHHFEVLFQVARMAGFLPDDVEAEHVGYGMV LGPDGRPFKTREGGTVSLSDLLDEAETHAAPNIALAAIKYADLSNGLQKDYVFDAERMVQ TTGDTGPYLQYAHARVSQILRKAAAEANPNVDPEADLDAMDWGRISVLDEPAEQQLALLL SRFGEIVEVVATDLTPHKLCTYLYELAGAYSVFYEQCPVLRSTGEVRGSRLALCAATRRV LGRGLDLLGIDAPDRM >gi|302034491|gb|GL383260.1| GENE 145 130118 - 130939 787 273 aa, chain + ## HITS:1 COG:BMEII1060 KEGG:ns NR:ns ## COG: BMEII1060 COG0656 # Protein_GI_number: 17989405 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Brucella melitensis # 1 269 20 290 294 287 52.0 1e-77 MSVPTITLNDGVPIPQLGFGTWKVPANEAEKAVSAALEAGFRHIDTAAIYGNEEGVGRAL ADSGLDRKDLFVTTKLWNDSHHADDARKAIETSLAKLGLDHVDLYLIHWPAPVKYGDAYI EAWNALQDFKSEGLTRSIGVSNFKTEHLDAIEGAAPSVDQIEMHPSFNQATFRAELAERG INPEAWSPLGQSKDLDNPVLTDISKATGKTPAQVVIRWHLQIGNIVFPKSVTPSRIVENF DVFDFELSDEQIAAIDGLDHGNRLGGDPSTADF >gi|302034491|gb|GL383260.1| GENE 146 131006 - 131626 366 206 aa, chain - ## HITS:1 COG:all7616 KEGG:ns NR:ns ## COG: all7616 COG2949 # Protein_GI_number: 17158752 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Nostoc sp. PCC 7120 # 16 195 39 223 228 122 38.0 6e-28 MSTCIAAFVALLGPWALAGALSYGKVHDVADTEPRDVAIVLGAQVLPSGTPSAYLRGRLD VAADLYRSGKAKVILVSGDHRETHYNEPKVMKTYLVSKGVPAARIVEDVAGLDTYDTCVR ARRIFGVDRAIMVTQDYHEIRTVATCRMTGLDAVGVPDRTQPRDNVWWYGWGREFGSRLK MIWDVVSRREPTLGQTDNGVHKALNS >gi|302034491|gb|GL383260.1| GENE 147 132176 - 133858 1571 560 aa, chain - ## HITS:1 COG:Cgl0828 KEGG:ns NR:ns ## COG: Cgl0828 COG0166 # Protein_GI_number: 19552078 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-phosphate isomerase # Organism: Corynebacterium glutamicum # 6 559 3 540 540 630 58.0 1e-180 MQTPIDATSTPAWGTLSGLKSRFADGPHKLRRLFDADPHRAERYTFDVADLHVDLSKNLL TDEIRDALLELAAQMRVTERRDAMYAGEHINVTEDRAVLHTALRRPRTDELHVDGQDPVA DVHEVLDKIYAFADKVRSGEWKGVTGKPIRTVINVGIGGSDLGPVMAYEALKPYVKDGLE CRFISNIDPTDVAVKTADLDPETTLVIIASKTFTTLETLTNARCVRAWLLDGLVAAGAIA DTEQARRDAVAKHFVAVSTALDKVEEFGIDPVNAFGFWSWVGGRYSVDSAVGTSLAVAIG PKSFEDFLAGFHAVDEHFATAEPERNVPLFMGLLNVWYTNFWDAHSHAVLPYSQYLHRFP AYLQQLTMESNGKSVRWDGSAVTTDTGEIFWGEPGTNGQHAFYQLIHQGTRVIPADFIAV ANPAHPTKDGGTDVHELFLSNFFAQTAALAFGKTADEVRAEGTDEAIVPARVFAGDRPTT SIMAPELSPKVLGELIALYEHITFVQGAVWGIDSFDQWGVELGKKLALQIAPAVSGDDDA LKAQDPSTASLVTWYREHRR >gi|302034491|gb|GL383260.1| GENE 148 133845 - 135023 604 392 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5193 NR:ns ## KEGG: HMPREF0675_5193 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 36 392 1 357 357 482 98.0 1e-134 MGVCITLSLGDGAVLVRHTITSLRLSYSRSTKGGRVSAKYRRALALTSVLVISTSILTPP VCPTPTPWSVSAAHAAPPGATPPGNLTMNASLDRSGTVQVKGALRTHTKQPVSGALINLA VDGKPLAVGVTHDNGSWSGTFRLPPTMQAGTHELSATFDGTEGVGAASASGTFSIAAQPT VLTAAVKPTTAAPGALLNVNGTVTLPTHRRVTDSHVAILLGTDGQAALTAPTDSQGNYQA AFQVPLDAPNGPLTVTVKLVDSRYGVSQQAVTVQVKSASPTPTPTLTPSPTPTSVTPTPS SPSTPVATHDSEESPDGRIPKTSTSPIPTARRSVVDAFGGRKPILILAGVIGVLLLGVLL GSLTRRRGDNVHSSDEGDGNSLFDEWDGPDSH >gi|302034491|gb|GL383260.1| GENE 149 135065 - 135730 693 221 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5194 NR:ns ## KEGG: HMPREF0675_5194 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: Pentose phosphate pathway [PATH:pak00030]; Pentose and glucuronate interconversions [PATH:pak00040]; Arginine and proline metabolism [PATH:pak00330]; Glyoxylate and dicarboxylate metabolism [PATH:pak00630]; Metabolic pathways [PATH:pak01100]; Microbial metabolism in diverse environments [PATH:pak01120] # 1 221 1 221 221 354 100.0 1e-96 MSAEVDDLGRTDDRLTFPDEVVAGKIIAVLPDVPAADLMAPVEAMIQEKVRVFALPVADA ERRRAVLRIYRRRAVVGVHGVMTVEDVQGLVDDKVSFALPVAANREVLDALRQAGIPAAP DALTPNEVRAAWGAGADAVQVAPADMGSASYGDILTRMAPGAALIPRGGVGSYALRRWLA AGALAVCLDDVLVGDACEDGIVSALRERCRSVLQVVADADA >gi|302034491|gb|GL383260.1| GENE 150 135651 - 135914 113 87 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|315079328|gb|EFT51329.1| ## NR: gi|315079328|gb|EFT51329.1| hypothetical protein HMPREF9565_00447 [Propionibacterium acnes HL053PA2] # 17 87 1 71 71 135 98.0 1e-30 MIFPATTSSGKVSRSSVRPKSSTSALISHIMPYEGHLADTKSDQHSAAHIFRVWDGITHV RPVLPYMYAGGRLLATPNEGDVAWLTP >gi|302034491|gb|GL383260.1| GENE 151 135899 - 136429 616 176 aa, chain + ## HITS:1 COG:DRB0092 KEGG:ns NR:ns ## COG: DRB0092 COG0783 # Protein_GI_number: 10957408 # Func_class: P Inorganic ion transport and metabolism # Function: DNA-binding ferritin-like protein (oxidative damage protectant) # Organism: Deinococcus radiodurans # 2 174 35 222 241 75 31.0 7e-14 MANTVNVPNPAGQTTTKLENAESGFKASETLAANLQKVLVDFIALELVGKHAHWNIVGPN FRDLHLNLDEVVEIAREGADEIAERMRALHASPDGRPAVVAASTTLPESPQGEVLTHDAI KVVTASIESVTGTMREVHDQVDEEDPTSADILHGLIQQLEQQAWFISAETRTPTAH >gi|302034491|gb|GL383260.1| GENE 152 136585 - 139176 2104 863 aa, chain + ## HITS:1 COG:Cgl1878 KEGG:ns NR:ns ## COG: Cgl1878 COG4581 # Protein_GI_number: 19553128 # Func_class: L Replication, recombination and repair # Function: Superfamily II RNA helicase # Organism: Corynebacterium glutamicum # 53 852 38 840 850 807 51.0 0 MRLAEALDDMVDGRAPVTTDRGERQPGWDSPGARPLDADMALDHIERAVAADGISMYEHQ EEAILEILAGNHVIVTTPTGSGKSLIATAAHFACVAAGGRSYYTAPIKALVSEKFFSLCE IFGAANVGMVTGDASVNADAPIICCTAEILANIALREGHHASIDQVVMDEFHFVGDPDRG WAWQVPLSELPQAQQIIMSATLGDVSDLSVGLTTATGRPTSVITGVVRPVPLEYSWSMKP DHEAIEELVADQKAPVYIVHPSQKQAVERAQSMTSMKLVSTEERHAIAAEIAGFRFAKGF GSTVRKFITAGIGIHHAGMLPKYRRLIETLAQQGKLKVICGTDTLGVGINVPIRTVMFTS LTKFDGRRTRVLKSREFHQIAGRAGRAGFDTVGYVVAQAPEHVIANHKALAKAGDDPKKR RKVQRHKPPEGFVNYSEETFTKLIESTPETLHARMRITEAMLLNLLQRDEDTARAVQHLV EAATPAVAERRRLYRRAVQIGLSLLRSEVVHRLEVPTPGGRRFAMNEALQDDFALNQPLS AFASEAVATLDPDSPSHALDVVSVIEATLDNPMTVLIAQQHAARGEAIAHMKEDGYDYED RMAAVEEIEWPRPLEDTLNALFDIFAPSHPWVPADALQPKSVVRDMYERAMTFGEFCAHY KVQRSEGLVLRYLTDAYRALRQTVPESERTDELSDVISWLGEVVRSTDSSLIDEWEDLTH PLDEEPEEVRPARTFTSNQRAFTVMVRNAMFRKVILAADDDFEALGALEPERSAMTTTAW EDTLGTYWDEHDEINDGPDARAPGLFMIENESRRRDSRIWLIRQIIDDPAGNHDWSITAT VDLDECDEADDLVLRTRAFARLD >gi|302034491|gb|GL383260.1| GENE 153 139191 - 139541 164 116 aa, chain - ## HITS:1 COG:SP0205 KEGG:ns NR:ns ## COG: SP0205 COG0602 # Protein_GI_number: 15900141 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Organic radical activating enzymes # Organism: Streptococcus pneumoniae TIGR4 # 9 108 82 180 196 69 42.0 1e-12 MNSSVLASGLTLSGGEASRQPRACARLARAAHEMGWDVWSWSGYTVEALMRQARRDAELA DMLGQIDVLVDGPFQLVHRTLTLPWRGSSNQRVIDMPATLRGGRAVEWADRAGNLR >gi|302034491|gb|GL383260.1| GENE 154 139703 - 142045 1803 780 aa, chain - ## HITS:1 COG:CAC0480 KEGG:ns NR:ns ## COG: CAC0480 COG1328 # Protein_GI_number: 15893771 # Func_class: F Nucleotide transport and metabolism # Function: Oxygen-sensitive ribonucleoside-triphosphate reductase # Organism: Clostridium acetobutylicum # 21 780 3 695 702 531 39.0 1e-150 MSTIVQPDDQTISQQRAVPTSIRKRDGRVIRFDSTKIVEAVRKAFVACGMGTSELHASEV ALEVMSRLSEMGEETPDVETIQDLVEKTLMDQGHDDVAKAYILYRQRRTVARDQQSALMR TLREITFASAEEADAKRENANVDGNSAMGSMLRYGTESAKQFNLLEVLDPAHAAAHRDGD IHIHDLDFLTLTTTCCQINLTDLFEHGFSTGHGVLRAPQSIGSYAALACIAIQSNQNDQH GGQAVPNFDRDMAPGVAKTFKRAAQTGLARIFEVLGGDEDKVDEVREAASEWTLEPDETG LAAEREQVGRLFAGLARDTDRLAERIRRQALEETRRQTYQAMEALIANLNTMNSRAGAQT PFSSINYGTDTRPEARMAMRCLLEATEAGLGGGETAIFPIQIFRVQKGVNLNPGDPNYDL FRLACRVSAKRLFPNFSFQDAPFNAEFYRPGHPETEIAYMGCRTRVMSNVHDPSRAQTWG RGNLSFTSINLPRLAIEAHHDVDAFFASYDRMIDLVIDQLLDRLKIQSHKLVRNFPFLMG QGVWIDSEELRADDSVAEVLKHGTLSVGFIGLAETLTALIGVHHGESEEAQQLGLRIVGH LRERMDEAAERTGLNFSALATPAEGLSGRFVRMDRQRYGSIPGVTDREYYTNSFHVPVWC HIGAADKIAIEAPYHAFTNGGHISYVELSGDPARNVDAFVAIVRHMAASGIGYGSINHPV DRDPQCGYTGIIDDECPGCGRAEGSGPFDRIRRITGYLVGTLDRFNDAKRAEVRDRVKHG >gi|302034491|gb|GL383260.1| GENE 155 142501 - 142962 512 153 aa, chain + ## HITS:1 COG:VC1075 KEGG:ns NR:ns ## COG: VC1075 COG1881 # Protein_GI_number: 15641088 # Func_class: R General function prediction only # Function: Phospholipid-binding protein # Organism: Vibrio cholerae # 1 150 24 177 180 132 47.0 2e-31 MKITSTSITEGQPIELAYAHADAGGKNISPQLSWTPGPEGTKSYAITIYDPDAPTGSGFW HWILADIPADVTSLGEGGPLPAGVREWTNDYQEEGYSGACPPPGPAHRYIHTVHAMPTEH LDIPDEAANVQVRFAIHTTELDSASITGTFQQS >gi|302034491|gb|GL383260.1| GENE 156 143258 - 143620 124 120 aa, chain + ## HITS:1 COG:no KEGG:PPA2139 NR:ns ## KEGG: PPA2139 # Name: not_defined # Def: putative serine esterase cutinase # Organism: P.acnes # Pathway: not_defined # 1 78 22 99 354 158 100.0 5e-38 MFVGVRGSGETPPYGDTITSIRDALAQKWRGKGTVRQVYLNYPAADPHTLQNTPMSSLLF DSTMPSTEYFDSAALGAKNSSPCLIPRKSSALRNGWFSLVFPRGHKPSRRPLLRPTPHSV >gi|302034491|gb|GL383260.1| GENE 157 143503 - 144258 667 251 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5201 NR:ns ## KEGG: HMPREF0675_5201 # Name: not_defined # Def: cutinase # Organism: P.acnes_SK137 # Pathway: not_defined # 1 251 165 415 415 427 99.0 1e-118 MLNTEKKQCPKEWVVLAGFSQGSQAITQALAQTDTPQRLAGAILVGNPDHYPGQNVQEVS GDADQSAIGMAAILYYLRERANATPGANRDAQMRAIIEATLSLSQNSINQKALDADMSKA GAAIPAEAYPETYSVCMKGDPVCDTAPALTRILTLQSTWQDELNQGRPIHMGYTRTVMEG ALDRIAQRINAIGAAEAKGTPLPHGSTVAVTTRDWGPLQIGVAVGAGVAGLGAGWLLGRA GRRRQRRRRWH >gi|302034491|gb|GL383260.1| GENE 158 144264 - 144962 424 232 aa, chain - ## HITS:1 COG:no KEGG:PPA2140 NR:ns ## KEGG: PPA2140 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 232 1 232 232 349 100.0 5e-95 MLSFLAAAFALGIAGFDPLGSLVLLAALGLGVRRRGVVTLLVTSVGTSAGFGIAGVLGLG ALLTRLGVHGFHVPHVVWVCLVTVLGVVFVAWAAWRSRPGAPTKDFGGDTSAAPRSTAPR ALAVSGLLVGLSSLIDPAFWAMLVHAAHLPHQSWAVVESLIWVACSHSLLIVLVIAYLIG GPDRVASMVTGIRESHAVAVRRGISALLAAFGILLLADVIGVVATGQWFFEI >gi|302034491|gb|GL383260.1| GENE 159 145485 - 146057 727 190 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5204 NR:ns ## KEGG: HMPREF0675_5204 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 190 1 190 190 259 100.0 3e-68 MIKNRLVAAGAAAALATGTALMAVPAHAATPAPAPTPAPSAPAKPGINVSKLPIHIDFDC LKKNAQERHQIELKIAKILVKDGTAKSKAVAVDSAKEIIDTVLKDPSLLAKPGALVTKIV KIITDNALKAFGDTTALGDLKQLAQDIVNNLKAAKACFVINIPGQPPKIQHVGHLGDLQS AAWLPASQVR >gi|302034491|gb|GL383260.1| GENE 160 146106 - 146258 67 50 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAWGRVRIRTWLDVHVSQCHVHISAAPTHVKRGRDKGLRENPQPHSCRAT >gi|302034491|gb|GL383260.1| GENE 161 146336 - 146506 227 56 aa, chain + ## HITS:1 COG:no KEGG:PPA2142 NR:ns ## KEGG: PPA2142 # Name: not_defined # Def: putative lysophospholipase # Organism: P.acnes # Pathway: not_defined # 1 56 1 56 373 98 100.0 1e-19 MTFTKKLSALAIAGTMAITGASIATVPAVAADKAPAPATATVQSKLITGYTTSTDQ >gi|302034491|gb|GL383260.1| GENE 162 146636 - 146809 82 57 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313802968|gb|EFS44179.1| ## NR: gi|313802968|gb|EFS44179.1| conserved domain protein [Propionibacterium acnes HL110PA2] conserved domain protein [Propionibacterium acnes HL082PA1] # 14 57 1 44 44 65 97.0 1e-09 MPEEEHLFAGVFLVGDLHELVHVVDEVAPIVDVATWDGVVDVWARATTMPAVIEAVG >gi|302034491|gb|GL383260.1| GENE 163 146756 - 147457 760 233 aa, chain + ## HITS:1 COG:MT0192 KEGG:ns NR:ns ## COG: MT0192 COG2267 # Protein_GI_number: 15839561 # Func_class: I Lipid transport and metabolism # Function: Lysophospholipase # Organism: Mycobacterium tuberculosis CDC1551 # 3 228 138 319 323 67 25.0 2e-11 MQIAHQENAGKKVFLFGHSMGSFAVQSYGAKYPGTVAGIVSNGGGIAVNPWGRDTEGPEK VTAHDLTDAEKNAAPTISQLLPMDKLTSFNGILLTQAVRHPKAIHLPSTAAEAFIQFKNP LANGVCTDPAVIEDYKKDPLNNKYMSLGMVKQMGVAQVYNTFNAPSFSEPTLIMHGANDG IVPSYFDVNWYNAIGSKDKKIIEWEGLMHETINEPVKDQVDDTIINWINAHNK >gi|302034491|gb|GL383260.1| GENE 164 147647 - 149140 996 497 aa, chain + ## HITS:1 COG:L81453_2 KEGG:ns NR:ns ## COG: L81453_2 COG0726 # Protein_GI_number: 15672265 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Lactococcus lactis # 289 482 28 219 222 131 37.0 2e-30 MLPKPNLPLRVTAVALTTCLALSACSSHSDVKNPSQSGSSSTAGVSNATLAKIPAAQAGA TDITFNAAPEKVKAIFPRFAKARNLSTAVEVVKGRMLRDSWQQNASDVNVTSQIIASNDA ALGVLVTNQTTIAGKKQTIPATIWYSTAAQQSYSSPALVKPDKWADLTTALQDAGKDQSL DGGKIAAAVKAKSAPYGSGPALGFSHNGDLLASFASGVVTDKAVTLVVPSDKTKGMLSNF GTQAQKASTNPGTFTGTTSQPVDESLKATDTSGRPPTAVGPDCRVLHCVAVTYDDGPSAM TPELLNTIKKFKLSITFFEMGNSIMAFPNTAQKVAAAGMEIGNHTVTHPNLPAKTPDRIR RELEHNSQLIKQFTGATPLLFRPPYGAHNDTVDKVAKDNGMAIIQWQIDSEDWKNRNPEM TYKNVMTALPYTAPIVLEHDIQKASIDAAPQIYKDLEAKGKTIVSVSELSLNTGGYQAGH AYCNGTVKPQSGYNCKG >gi|302034491|gb|GL383260.1| GENE 165 149137 - 149997 599 286 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5208 NR:ns ## KEGG: HMPREF0675_5208 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 286 1 286 286 517 99.0 1e-145 MRIRPGGRTAVEGLTLLACAALGFYLLLSGRVHLFFGTIITTLLWVACPVLTVMGLWTLA HAVRHPNTTGHHRARIGLLIVAPVALGLFVPLEPLTLLGAASYRPAVRGTSSSPAHSSSW NNGLPAAPTSISPVAIDPKTGKTVGGYDNGGDNIGSDRNGPMGPPPAQWPALKGNPAELT IYDYVQRADDPRGIATLKGRKLTMIGFVSAAPEDPAHAWVLARLKMWCCVADALPFMTTM VGASSRPTGGSWIRVTGTYLPSSPNGDTRFRVERIDQIPVPENPYI >gi|302034491|gb|GL383260.1| GENE 166 149994 - 150917 754 307 aa, chain + ## HITS:1 COG:SPy0576 KEGG:ns NR:ns ## COG: SPy0576 COG0701 # Protein_GI_number: 15674665 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Streptococcus pyogenes M1 GAS # 2 303 5 300 300 150 30.0 3e-36 MSELPPQVNAWLVIFIGIWLQAVPFLLLGTIISSTLTAFLKPQALARFLPRQTALAVVVA GLAGIALPACECASVPTTKSLVRAGVPTAAALTFMVASPAINPVVIAATAVAYTVNPRMA VARFIAGLLAAVLIGLGWIWLGRPLRGVDDGSPGSACEEACGLHDHQPRTMSAMAETFRS ELTHDFIQSCGFLVIGAAIAATVKVCVPIAWMQALTINVVVEAAVLSLLAVIVALCSEAD AFMAVSLTSFSPTAQLAFLAIGPIVDVKLMAMEGGAFGAGFLKRFVPLATCCCFVSAILI GALIFSS >gi|302034491|gb|GL383260.1| GENE 167 151074 - 152630 959 518 aa, chain + ## HITS:1 COG:L81453_2 KEGG:ns NR:ns ## COG: L81453_2 COG0726 # Protein_GI_number: 15672265 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Lactococcus lactis # 309 503 28 219 222 133 39.0 7e-31 MSASPRRSIRALAIALVALLSLGACSHDDGDPNASPSDIRSTMKSTSVASDHVSGASMTS TSFRKPSDISIKVPTITTARNLSQAIEVVRERTLRGAAWDSATKVTMTGHFISSTTDLLG VELQAEVTKGKTTSQSTTTLWYDATMKQTLSASALISWPGWPKFSQEVVKSAHADGLNGK KAEAALQQPQAPYGTGPALSFDSKGDLLVKFPAGAIDSVQRTVLIDSKAVSPTLSGLGQK ALGASLHPTSFTGTPSTDATWFTKLKTSPKPADSPNTRPLPGDPATKTSSTPTHPSTAIG VDCIVENCVALTYDDGPADTTAKVIDGFTHAKAAATFFLLGTNVDNHPDTSTLLAGSGFE VGSHSASNRTLTTLGPRGRTAEITDAVNALSKLTGRPTMLFRLPYGAHNEQIDAAMAKQN LAMVNWTADSNDWQNRNAGKITKTVTEYATTYTQPIIVLHDTYSSTADATSGIIEALRHK GMTLVTVSELTVNTGGLETGKVYCRGTAVNQNGFGCHN >gi|302034491|gb|GL383260.1| GENE 168 152665 - 154491 1463 608 aa, chain - ## HITS:1 COG:Cgl3028_1 KEGG:ns NR:ns ## COG: Cgl3028_1 COG0728 # Protein_GI_number: 19554278 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein, putative virulence factor # Organism: Corynebacterium glutamicum # 49 527 41 527 640 177 31.0 5e-44 MPESHDDDVYDLLRLPEAAPPVDVYDSLDIDAVTFGADVSRRSLRRFGADEDFDRTRVIS GVITSPATSAAPEAPAEGSLRRASIVMAAGTMVSRILGFVRTYLLTVIAAGTSLTLDAFQ AANTLPNVVFILLSAGVLNAILIPQITRAMKQPDGGQEFVDRLLTVSFASVLVVTTVATL ASPWLLDLYFSSSGATRHLTIFFGFICMPQIFFYGLYAILGQVLNARNQFAAFMWSPVLA NVIQIAGLVWFLVQFGAHPDPATWTPEMVWVLAGTTTLGIIIQGLFLIIPLHRGGFRWRP RWGIRGYGLGAAARITVWTFTALVIAQFAGIIMKKMLSHVRLVHPEVSSSISAYDNAFLI FMLPQSFITTSILTALFPRMSRANADGSNSAMKKLLRQGLEMPALAIIPCSLAMVVLARP GVQTVFSLEPGQVGSLARAVAVMGVGLLPFGIATLQQRYCFAREDGKLNLIMQAVTTGVQ LIILVTMFVFPPQHALVVVAAAQTIANLVGAVAWLVVASRQLGGIGMGEVNRLWTKLAVA SIVAAVPTYLVAHGIDAAGHGAWVGHAGGTLIGGVLFVALFLVLAKILRIVEVLDLLNPM LRKVMRRS >gi|302034491|gb|GL383260.1| GENE 169 154499 - 155773 1147 424 aa, chain - ## HITS:1 COG:MT3812 KEGG:ns NR:ns ## COG: MT3812 COG0527 # Protein_GI_number: 15843329 # Func_class: E Amino acid transport and metabolism # Function: Aspartokinases # Organism: Mycobacterium tuberculosis CDC1551 # 1 424 1 421 421 506 64.0 1e-143 MTRVVQKFGGSSVADAASIKRVARRIAATKQAGNDIVVVISAMGDTTDDLMDLALEVSPQ PAPRELDMLLTTGERQSAALLAMALSDVGIPARSYTGSQAGVITTAAHGNARIIDITPGR IEKSLEAGDLVIVAGFQGVSQTTKDVTTLGRGASDTTAVALASSLGADFCEIYSDVDGVF TADPRIVKGARRIPEISYEEMLEMAACGAKILHLRCVEYARREDVPVHVRSSFSDKPGTW VKDPTDITKGSDMEEAIISGVAHDRSEAKITIAGLPDAVGRAAQIFEIIAHADINIDMIV QNASRVMNGRTDLSFTLPMNDGPTAVRALTAVKDELGYEQILYNDQIGKVSVVGVGMRTH PGVTSTFFRALADCGINLQMISTSEIRISVVVDADQVDEAVRVAHTAFGLDAEGEAVVYA GTGR >gi|302034491|gb|GL383260.1| GENE 170 155667 - 155864 73 65 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSLPACFVAAIRRATRLIDAASATEDPPNFWTTRVINPPARFGHQSLTGDSTATPPYTGA PQSIA >gi|302034491|gb|GL383260.1| GENE 171 155961 - 158483 2096 840 aa, chain + ## HITS:1 COG:Cgl0279 KEGG:ns NR:ns ## COG: Cgl0279 COG0744 # Protein_GI_number: 19551529 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Corynebacterium glutamicum # 29 801 14 777 795 249 30.0 2e-65 MSEASRILGYMRSDRHGKLYPLAMFGIVSILTGLLMAGFVVPLAALTGGTAKMVASSMED LPPELMSTPQAQKSHILMADGSVLATFYDENREYVPLSKISKQMQTAQVAIEDNRFFSHG AIDLKGTARALATNIAGSARQGGSTLTQQYVKQIRIEAAVAAGNEEGVQAAQEPTITRKI QELRYAVAMEKKLSKKQILERYLNIAYFGDGAYGVESAAHHYFGTTAANLDLAQSAMLAG LVQNPVAYDPVNHPEAAMNRRNIVLARMAQLNLISADQARKAEATVFDKSKVFYPKNGCI SSKYPFICDYAYRSLLQMPSLGKNPEERAKMVKRGGLTIQTSIDPKVQDAAQNAVSNVVG PKDPVLAGTAIVQPGTGLLMAMAQSRPIMGDKPGQTYYNYMAPASMGGATGFQAGSTFKA FTTAAAIAKGIPMSKHYTASSPMDFTGEKFTSCKGTFKSGPFRVRNSTGHSWNIGLREAA AWSVNTYFVQLEQDVGMCGVTKMAQDSGVKLSSGKDIVKTFQKVPSFTLGTAYVSPLSMA SSYASFASRGIQCDPIILTSVKNRDGSPLKVPTGNCKRVMPQKVADGVNSVLSGVMDATG MPARIPGGYPQAGKTGTTDAHEAAWFDGYTPQAAGVAMIAADGGNSYFRGDKSRSIKGIR TSTGVYLNGSGGSDAGKIYRAAMAGALQGKPKTEFVAPTDEVRYGKLIKIPSTDGMTYPQ AKAAILKAGFRTKVWHVWDDSEPGTYLGTDPEGSAHAGAAVTLKISKGPKPAPKPTYAPP QPPQNQPNNPGNEQPGGQQNNPPGDNTAGNNGGTEGNNGGDYGGNTGGGQQNPPGTTGPR >gi|302034491|gb|GL383260.1| GENE 172 158413 - 159399 688 328 aa, chain + ## HITS:1 COG:MT3785 KEGG:ns NR:ns ## COG: MT3785 COG1408 # Protein_GI_number: 15843301 # Func_class: R General function prediction only # Function: Predicted phosphohydrolases # Organism: Mycobacterium tuberculosis CDC1551 # 25 328 1 299 319 285 48.0 1e-76 MAAITGVTPEVVNRTRPERRDLADMRAAMKTGFTAVASVIGVGVAGLAYGVIEAHRFVVR HVEVPVLKPGSSPLRILHMSDLHLLARQETKRRFIRQLDALNPDLVINTGDNFCSADSLQ PLLDDMSGLLQRPGTFVFGSNDYLVPKFKNPFSYLLWGRSQQATEPVPELPHEELRQAFT SAGWLDLNDKSETLEVAGHRLTLRGTDDAHHDRDHYEEVAGPPDGEADLNIGVTHAPYLK ILDAMVSDGMDIVFAGHTHGGQVCLPFTGAIITNCDLDTERAKGLSQHGRGGHTGWLHVS AGLGCSPFAPYRTFCRPEATLLTLVPRP >gi|302034491|gb|GL383260.1| GENE 173 159767 - 160306 598 179 aa, chain + ## HITS:1 COG:PA4171 KEGG:ns NR:ns ## COG: PA4171 COG0693 # Protein_GI_number: 15599366 # Func_class: R General function prediction only # Function: Putative intracellular protease/amidase # Organism: Pseudomonas aeruginosa # 6 174 11 179 187 189 57.0 3e-48 MAARALIAVTDFGVEEAELVEPLNALKKAGIEVTVASNSGESIQTVTGDKDWASKVNADS RLADAKASDYDLLVIPGGTVNADTLRIDEDGRRLVKEFATAGKPVGAICHGPWVLIDADV AKGKTMTSYISIRPDLENAGASWVDKELFRCPGNGWVLLTSRNPNDLPAFAKALVDEIS >gi|302034491|gb|GL383260.1| GENE 174 160606 - 162273 1665 555 aa, chain + ## HITS:1 COG:Cgl1944 KEGG:ns NR:ns ## COG: Cgl1944 COG4166 # Protein_GI_number: 19553194 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Corynebacterium glutamicum # 53 541 44 520 534 327 39.0 4e-89 MRHMRPLIALSLAGLMTLSACGEDVAAKDDSAAGSSAAGGSNNSAPAKDGGSITVRGCTP QNPLIPSNTNETCGGNVLDAVTARLIHYNPDTAKPEMDIAQSIETKDNQNFTVKIKPGYK FSDGTKVKAQNFVAGWNWAAYGPNAQQSGYFFEPIEGYADEQCGDEACKTKPKVKTMSGL KVVDDHTFTIKTTEKVSNLKVRLGYTAFAPLPDAFLKDPTNKKWEKMPIGAGPYKVTDNT ATAITVAKNENYAGAYQGHVDKVTFKIYNDASPAYNDTVANNLDINDLVPTDQLTNDQWK SDLSGRWAIRQSGINQTLTYSGKDKQLASNKDLVKALGMDIDRETITKQIFAGSRTPADG WVSPVVDGYKKDQCGQMCKYDKDKAVELYKKSGGYKGTLTIAVNGDGDHKAWSQAICNGW KNDLGLKCQLKVTPDFKTLRDMITKRQLQGFFRTGWQMDYPSIENFLTPMYATGASSNDN DYSNKAFDAKLADAAAATNTGEANKLYQEAEKMLVEDPPNIPLWTTSTPFAWSNKVANVK LTPFGTIDFQSVSVK >gi|302034491|gb|GL383260.1| GENE 175 162346 - 163269 843 307 aa, chain + ## HITS:1 COG:MT3766 KEGG:ns NR:ns ## COG: MT3766 COG0601 # Protein_GI_number: 15843279 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Mycobacterium tuberculosis CDC1551 # 1 306 1 307 308 296 56.0 3e-80 MSRYIVRRILQMIPVLIGTTFIIFCLVFALPGDPTAGRCGERPCPPSYVAAFRAEYNLDK PLLVQYGLYLEKLLHGNLGVDYYGNTVVSELGARYPVTIKLAIIALLVEIVIGILAGAWA GVRRGKFIDYFVLVSSLIVISIPIFVIGSLAQLVFGLRLGWFPVTAGDGSWGALVLPGLV LGALSVAYVARLTRSNLLENQRADYVRTAKAKGMSPSRIVTVHTLRNSLIPVITFIGYDF GALMGGAIVTERIFNINGIGNYVYRSINQRDGVSVVGAVTCLVLVYLLANLLVDLLYGVL DPRISHD >gi|302034491|gb|GL383260.1| GENE 176 163262 - 164233 728 323 aa, chain + ## HITS:1 COG:Cgl1946 KEGG:ns NR:ns ## COG: Cgl1946 COG1173 # Protein_GI_number: 19553196 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Corynebacterium glutamicum # 29 321 56 340 344 250 47.0 2e-66 MTESRTNLSPLGSSGPEAMADPTPGENDVLGNSKPRSVWNDAWDSLERNPLFWISVTLIV VFLVMAAVPAIFTSKDPTDCNLSAARHIPSAVHWFGTDIQGCDVYSRTVYGARSSILVGV LATLGTTILGAFIGLVAGFRGGWLDTLLSRTGDVFYAIPLLLGGIITLYTFPNEPGTPYL VMVLKVVGAIIILGWPSIARLMRSSVLQVLPHDYVQAARALGASSWRIIRSHILPNAVAP VIVVATINLGAYIAIEATLSYLGIGLQEPAISWGVSISDASGLGYVRSAPFMLLFPSLFL SLAVLAFIFLGEAAQDAFDPKQH >gi|302034491|gb|GL383260.1| GENE 177 164243 - 165280 551 345 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 30 315 28 306 329 216 43 4e-55 MARKTLTRARLHMEPVDGLLLKVDDLHVEFRTRDGVAKAINGTSFTLSERETLAILGESG SGKSVTAQAIMGILESPPAQITGGRIEYCGVDLLTVPEKKRRQIRGEHISMIFQDALSSL NPVFPVGWQIAEMFRVHRGMNRSDSMSEAIRLMERVHIPAAKERANNYPHQFSGGMRQRI MIAIAIALNPWVLIADEPTTALDVTVQAQIMTLLKELQEESGMGLILITHDLGVVADVAD DIAVMYCGRFVEHADVRRLYDNPAHPYTVGLLDSIPRLDQKGHELYAIGGLPPSLTNLPS GCSFHPRCRWATEECRVGGAPQFVEVEPGRWAACHHTEEVLRRDR >gi|302034491|gb|GL383260.1| GENE 178 165270 - 166331 909 353 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 8 332 6 324 329 354 55 1e-96 MTVKTTADKAKPILSVRDLTKHYPLKSGVVRHTVGYVKAVDGVSFNLYPGETLGVVGESG CGKSTLGRLLVNLEPPTSGTITFEGRDVTNLTGSAMRKLRRDIQIVFQDPYTSLDPRMTV GDIVGEAFRIHPDAVPRRKRTERVKELLDLVGLNPEHINRYPHEFSGGQRQRIGIARGIA LNPKVLVCDEPVSALDVSVQAQVVNLLQKLQRELGMAYIFIAHDLSVVRHISDRVAVMYL GRIMEIGDEEQIYERSTHPYTQALLSAVPVSDPSARGMRHQILLHGDVPSPANPPSGCRF HTRCWRAQPLCSEKETTLTMHADGHGEHACRCHFAEIFEKASDDISPVSRKES >gi|302034491|gb|GL383260.1| GENE 179 166559 - 166804 429 81 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|50843595|ref|YP_056822.1| 50S ribosomal protein L31 type B [Propionibacterium acnes KPA171202] # 1 81 1 81 81 169 100 6e-41 MKQGIHPDYHPVVFRDISADTAFLTRSTVTSSTEIKWQDGNTYPVIDVDITSASHPFYTG KAKIVDTAGRVEKFNRRYGKK >gi|302034491|gb|GL383260.1| GENE 180 166901 - 167137 412 78 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843596|ref|YP_056823.1| 50S ribosomal protein L28 [Propionibacterium acnes KPA171202] # 1 78 1 78 78 163 100 6e-39 MSRRCQVRGTKPEFGNNVSHSQRHTKRRWNPNIQKKRYWVPSLGRKVTLTLTPKAIKEID RRGVDIVVAEMLTRGEKI >gi|302034491|gb|GL383260.1| GENE 181 167137 - 167307 286 56 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843597|ref|YP_056824.1| 50S ribosomal protein L33 [Propionibacterium acnes KPA171202] # 1 56 1 56 56 114 100 2e-24 MAKKTTQLRPIIKLRSTAGTGYTYVTRKNRRNTPDRLVLKKFDPIVRRHVEFKEAR >gi|302034491|gb|GL383260.1| GENE 182 167307 - 167612 508 101 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843598|ref|YP_056825.1| 30S ribosomal protein S14 [Propionibacterium acnes KPA171202] # 1 101 1 101 101 200 100 4e-50 MAKKSKIVAQKKREKLVAQYAERRAELKAIMKCPTASLDERMEASRKLSRLPRDSSPVRL RNRDQVDGRPRGYVGKAGVSRARFREMAHRGELPGITKSSW >gi|302034491|gb|GL383260.1| GENE 183 167548 - 167787 286 79 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843599|ref|YP_056826.1| 50S ribosomal protein L32 [Propionibacterium acnes KPA171202] # 24 79 1 56 56 114 100 2e-24 MPVSVRWPTAANSPESRSQAGEAMAVPKRKKSRSTTRHRRAQWKTTPTQLVEIRVEGKVL RVPRNLVKAYHSGLIDVED >gi|302034491|gb|GL383260.1| GENE 184 167987 - 168229 126 80 aa, chain + ## HITS:1 COG:DR1839 KEGG:ns NR:ns ## COG: DR1839 COG0545 # Protein_GI_number: 15806839 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerases 1 # Organism: Deinococcus radiodurans # 3 79 75 151 152 90 53.0 9e-19 MALSNGREFDSSWNRGEPLTFQLGAGQVIPGWDEGVQGMKVGGRRKLVIPHHLAYGPQGI SGVIAGGETLVFVCDLVNVI >gi|302034491|gb|GL383260.1| GENE 185 168242 - 170131 1359 629 aa, chain - ## HITS:1 COG:BH0675 KEGG:ns NR:ns ## COG: BH0675 COG1472 # Protein_GI_number: 15613238 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase-related glycosidases # Organism: Bacillus halodurans # 27 614 129 686 686 281 35.0 4e-75 MKRRTVMAAAAGAFAASALPLSRAAADDTRSQLASMTLDQKIGQVLWTHVFGASADDASM ARKNQLAFGDDVRTPAQAVQKYHLGGVLYFNWSGNISTPTNPAAVAHLSNGLQEAARTSS TAPLAIAVDQEGGIVARITSPATEFPGNMALGAVNDPSAARAQGAVLGRELAALGINVDF APDVDVNTNPANPVIGVRSMGDDPVRVGVLGVEQIRGIQSRGVAATAKHFPGHGDTQIDS HLGLPVVEYGRTTLERHLVPFRMAISAEVDMIMTAHIIVKTLDPTMPATLSKKVLTGLLR EQMGYRGIITTDALDMEGAQLAVMTEDEKGTYTRLKAAADAEGNDPTAADEGHASAEFNA FMKPIRGRVAVQAFEAGSDILLNPHDADAVVTAMRRAIADGRVSERRLDESVLRILSWKR RRCITGRPVDLAAADREVRSGRKVADDIAARSVTMLVNDGTLPLKPSRVLVTGTRRGNPE YLVEPLRLAGFTPILVPSTGQEPTTADVEKAVTVGVDAVIVVTHGLKRGDAQDAMVKALA RTGNPVVEIMTGTPYDVAMTHRPHAALAVYSNRKVSMVAAVAMMAGRNPVGRLPVRVPDP NGGTAFPRGFGLSYRATPGPYEGPGAKTA >gi|302034491|gb|GL383260.1| GENE 186 170371 - 172377 1903 668 aa, chain + ## HITS:1 COG:SPy2082 KEGG:ns NR:ns ## COG: SPy2082 COG2987 # Protein_GI_number: 15675840 # Func_class: E Amino acid transport and metabolism # Function: Urocanate hydratase # Organism: Streptococcus pyogenes M1 GAS # 2 667 4 671 676 998 69.0 0 MYDNSSTTAAMTIKLDAEFPPDPVFEPGIRRAPSRGFHLTPDQTKIALRNALRYLPPELH EKAVPEFLEELRTYGRIYAYRWRPAGHIKGRPIDDYEGRCTEGKAFQVQIDNNLDFDVAL YPYELVTYGETGSVCQNWLQYRLIKKYLSQLTEDTTLVVMSGHPLGLFPSRPESPRVIIT NSLMVGHFDNQKDWEICEEMGVANYGQMTAGGWMYIGPQGIVHGTFNTILNAGRIRLGIP ADGDLSGVLFVSSGLGGMSGAQPKAAEIAHAVGIIAEVDMSRIQTRLDQGWVGHVSDDLD EVFALAKKHIDEHTPISIAYHGNIVDLLKYAVDNNINIPLLSDQTSCHAAYDGGYCPQGL TFEQRTELLARDRDEYARRVNESLRTHYELIRTLTDRGTYFFDYGNAFMATVFESGVTEI AKDGDARNGFIWPSYVEDIMGPELFDYGYGPFRWVCLSGKREDLIATDHAAMDCIDPNRR GQDRDNYIWIRDAEANNLVVGTQARILYQDAQGRMDIALRFNKMVRDGEIGPVMLGRDHH DVSGTDSPFRETANIKDGSNVMADMATQCFAGNAARGMSLVTLHNGGGTGIGNAINGGFG LVLDGSERVDNVIRSSLLWDVMCGVARRGWARNAHSIETATEFNHEHNDAQITLPYLVDD DLIDGLVK >gi|302034491|gb|GL383260.1| GENE 187 172377 - 173573 716 398 aa, chain + ## HITS:1 COG:BH0761 KEGG:ns NR:ns ## COG: BH0761 COG0624 # Protein_GI_number: 15613324 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Bacillus halodurans # 4 398 13 414 414 181 30.0 3e-45 MTTWTAASLLAEIAAIGRNEDGSYSRFCLRPEEVALREWFVAKATELGLAIVTDANANIW AWWGTPGPDAVLTGSHLDSVPGGGAYDGPLGVVSSLVAVAKMQEAGIMPAKPFAVVAMAD EEGARFGMPCLGSRLASGKLSKAEAHTLVARDGQSLPDAWREAGLNPDLMGPDDVLLEAS CFVELHVEQGRGLADVGHPVAIATAVRPHGRWRAEFTGQGNHAGTTLIPDRHDPVVPMAQ TILAAREAAEREGCVTTVGRINVEPGGTNVIASAATMWLDCRAEESQTVTKVVEDIQQAS ETAADKQGCQVVWTRESWTDRTAFDLRARMLQILGEDIPQLSTGAGHDAATLATTMPTGM LFVRNPTGASHCPAESASDADCEAGAEALQTVLEELVK >gi|302034491|gb|GL383260.1| GENE 188 173570 - 174910 761 446 aa, chain + ## HITS:1 COG:YPO1974 KEGG:ns NR:ns ## COG: YPO1974 COG0402 # Protein_GI_number: 16122218 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Yersinia pestis # 1 440 1 439 456 219 34.0 1e-56 MSTWFFPSALVEGRIAHNVRVQSQNGVITAVTIGAEPHRHTFDGVAVPGFANTHSHIFHR GLRGAGEGEDFWSWRTEMYRLANRLDPDSYYRLARAAFAEMVAAGYTSVGEFHYVHHQPD GTPYRDHAMELALVNAAIEAGIRITVLDTCYLHAGPGASLGVDQKRFGDGSVEGWLERWR ALRDALPDSPLVTVGAALHSVRAVSPDEMATAVSGLPERVPIHIHVSEQPRESTECLAAH GLTPTAVLDRAGVLSDRTTIIHATHLTGGDIAMIAASDTVVSLCPTTEADLGDGIARVKD LQDAGVRMAIGTDEDVITDPFTELRMLESTARLVTGTRGVIGCEALWKIGTRNGVESLRP AAEPLPRQTSTPGPGSAGLAAGDPADIVVVEPSSARLAGVDPTRWPLVATANDVAATIVA GEWNRLDAAVAEDLRHVLDELRGRDS >gi|302034491|gb|GL383260.1| GENE 189 174907 - 176097 712 396 aa, chain + ## HITS:1 COG:FN0740 KEGG:ns NR:ns ## COG: FN0740 COG1228 # Protein_GI_number: 19704075 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Imidazolonepropionase and related amidohydrolases # Organism: Fusobacterium nucleatum # 3 385 5 410 413 209 33.0 6e-54 MSIVINNIGLLVTNDPSVGTDELGQIRNAAVVICGDRIAWVGPSAQAPAADHQSDMAGAC VIPGFVDSHSHPVFAGDRSDEFDARMNGQRYEAGGILRTVRRTREAPMGFLDAVMTGILD EMARSGTTTVEAKTGYGLDVETEVKLARVASSHTDEVTFLGAHVVAPECQPDEYVRLVCG EMLHAVRPYVRWIDVFCETGAFDPDQTLEILRAGTDAGLGLRLHAAQLGPSEVIPQACEL GLAAVDHCTFLSDEDIDALKATGTVATLLPAAEFSTKQPYPDARRLIDAGVTVALATDCN PGTAFTSSIPFCLAIAVREMGMTPEQALLSATAGGAAALHRDDVGVVKPGARADLVSLAA PSWLHLMYRPGVPLIDRVCKAGRFLRLDQPRLRLDG >gi|302034491|gb|GL383260.1| GENE 190 176233 - 177768 1300 511 aa, chain + ## HITS:1 COG:DRA0147 KEGG:ns NR:ns ## COG: DRA0147 COG2986 # Protein_GI_number: 15807816 # Func_class: E Amino acid transport and metabolism # Function: Histidine ammonia-lyase # Organism: Deinococcus radiodurans # 18 507 13 500 524 351 47.0 2e-96 MNPTTVDAGAPLTPRDVVAVARLGAQVTVGEDAIERVKRASDLVESLADDPTPHYGISTG FGALASTRVPRDYRVALQHSLIRSHAASTGPRVESEVIRAMMTLRLKTMASGHTGVRPKV VTAYADLLNSGLVPVVGEYGSLGCSGDLAPLAHCALVLTGEGTVLTPDGDEVDAATGLAQ AGLKPVSLREKEGLALINGTDGMLSQLIMALADLDVLVPTADLATAMTVQALCGIDRVFA PDLQALRPHPGQATSAANILALLEGSDLIQAGREGAAKRVQDAYSLRCAPQVHGAVRDTM AHALQVAKVELASAVDNPVITDDMRVESNGNFHGAPVAYVLDFLAIAAADLASMSERRTD RMLDPARNRDLHPFLADDPGVDSGHMIAQYTQAGIVSDMKRLAVPASVDSIPTSAMQEDH VSMGWSAARKLRRAIDGMGAVIGIEILTAAKAIQMRGLEPSKLVADVIERMRQTIPGPGP DRFLAPEIDEAHRLVASGELLEVARQSVEVS >gi|302034491|gb|GL383260.1| GENE 191 178152 - 178388 169 78 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5235 NR:ns ## KEGG: HMPREF0675_5235 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 78 74 151 151 152 100.0 3e-36 MVLLTESGAATGDIDDLAGVTRRAMRDAFHESKLLTKCVQDIHVLLDAPGDPDEGYGWDI VDLWDDREGVVAGGRSWG >gi|302034491|gb|GL383260.1| GENE 192 178842 - 179576 389 244 aa, chain - ## HITS:1 COG:CAC0284 KEGG:ns NR:ns ## COG: CAC0284 COG0846 # Protein_GI_number: 15893576 # Func_class: K Transcription # Function: NAD-dependent protein deacetylases, SIR2 family # Organism: Clostridium acetobutylicum # 5 238 9 244 245 271 53.0 7e-73 MTGEQLAHWIEESTSTVFFGGAGMSTESGIPDFSSAGGLYTTQHDLPFPAEYMLSHSCLV EHPAEFFDFYRTYLVHPQARPNAGHRALAALERAGQVSTIITQNIDGLHQEAGSRQVIEL HGSVHRNRCLACGRAHPLSVIMDAPGVPRCSCGGMVRPEVVLYEESLRSQDLDNATTAIS TADLLIVGGTSLNVYPAAALLRFFRGRHLVFINREATGYDRAADLVIHDGLGKTLSAVQR AVMP >gi|302034491|gb|GL383260.1| GENE 193 179579 - 180292 661 237 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5237 NR:ns ## KEGG: HMPREF0675_5237 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 237 3 239 239 417 99.0 1e-115 MNDIPQAPTTWCDPDDVGAPLPETDEVEADPQTVQIPPAESFEVLRRASEEELRAQERGE QLNPLESGRAAITIALTPLCQLEGAVMLGVSLLEAVAKRVEQVDEDAVEAYLPDWLFDHD NLTAADVPGLLVERVRRDLADPVVVSTMGEEAVEQLRSGLSAILAAQRHDAAEFSRHVNP DVDPEWLIDGCQEICVALAAHAATIGWQRPEVDVSNVFASLDMVSEPDLVCTLLRQA >gi|302034491|gb|GL383260.1| GENE 194 180372 - 181619 815 415 aa, chain - ## HITS:1 COG:Cgl0575 KEGG:ns NR:ns ## COG: Cgl0575 COG0596 # Protein_GI_number: 19551825 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Corynebacterium glutamicum # 5 415 17 427 427 436 53.0 1e-122 MTWNRNIPGLLTDDVRLRVPLNRSNPDDLRTIEVYARLVATPNGTDKPYLVFLQGGPGCE SPRPTLRDPGFPGWLSRALEDYQLVLLDQRGTGLSSPVSEPVGDAPSQAEYLTHLRADEI VEDCEDIRRHLGIQKWAALGQSFGGFTLLRYLSTYPESLSAGYFTGGLSAVGRSADDIYA ACYEQLRAKSLEYYKRFPGDRVRFAELAALAKKGEIATPSGDVVCPSRLRSLGHVLGASG GAEKLHYLLEYPHTSRAFRHDLAELLPYGGRNPLYAVIHESSYADGVVTDWSAARTLPDD FREDPTLLTGEHVMPEWFDTDQELRPWKEVADLIANHPWPKLYDPDVLRTAEVPCAAAVY HDDAYVPRKFSLETAALLPQMHAWVTTEYEHNGSNASGGAVLDRLIKLAKGEIVR >gi|302034491|gb|GL383260.1| GENE 195 181933 - 182964 899 343 aa, chain + ## HITS:1 COG:aq_1370 KEGG:ns NR:ns ## COG: aq_1370 COG0797 # Protein_GI_number: 15606566 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipoproteins # Organism: Aquifex aeolicus # 265 337 71 143 171 81 56.0 2e-15 MTNTSTNAGTTLKRTVALAAAASLAVMGTIAEEAHAAPAGNLGAHAEKAPTQHTKKAPAE QAKRATTYTARFALTRVHLNVRSGHSTEYRRYGLLRPGDKLLIIGEDVRGWTPVNYRGKT AWVATRYITKMNRPVGIYAQRGDHNARSKAVQRDLSTLNYFPAKWVGLPYGPITTNAVKV FQRANALKQTGVTDAVTLGLLKSKADYQRAAAAEKSSTYKHAEHHSEHSSSTSRSTARPA RNTSPDVSTSGIAGSCQASFYDDSQTASGESFSSSALTAASKTYSFGTRLKVTNKANGQS VVVRVNDRGPYVSGRCLDLSSAAFSRISSLSAGVADVTYAKVS Prediction of potential genes in microbial genomes Time: Thu Jul 21 05:58:21 2011 Seq name: gi|302034490|gb|GL383261.1| Propionibacterium acnes HL025PA2 genomic scaffold Scfld15, whole genome shotgun sequence Length of sequence - 321087 bp Number of predicted genes - 353, with homology - 340 Number of transcription units - 170, operones - 84 average op.length - 3.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 58 - 759 475 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases + Prom 590 - 649 1.6 2 2 Tu 1 . + CDS 677 - 1612 511 ## COG0177 Predicted EndoIII-related endonuclease + Term 1619 - 1654 -0.5 3 3 Tu 1 . - CDS 1486 - 1716 64 ## - Prom 1766 - 1825 76.1 + Prom 1748 - 1807 75.6 4 4 Op 1 4/0.069 + CDS 1844 - 2260 276 ## COG0526 Thiol-disulfide isomerase and thioredoxins 5 4 Op 2 . + CDS 2257 - 2913 381 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes + Term 2914 - 2942 2.1 6 5 Op 1 . - CDS 2994 - 3530 653 ## HMPREF0675_3273 hypothetical protein 7 5 Op 2 . - CDS 3627 - 4889 811 ## COG3004 Na+/H+ antiporter - Prom 4971 - 5030 2.4 8 6 Tu 1 . - CDS 5057 - 5815 526 ## COG0500 SAM-dependent methyltransferases 9 7 Op 1 . + CDS 6166 - 7002 260 ## HMPREF0675_3275 CpaE-like protein 10 7 Op 2 8/0.000 + CDS 7080 - 8165 513 ## COG4962 Flp pilus assembly protein, ATPase CpaF 11 7 Op 3 . + CDS 8162 - 8932 366 ## COG4965 Flp pilus assembly protein TadB 12 7 Op 4 . + CDS 8929 - 9216 164 ## HMPREF0675_3279 type II secretion system F domain protein 13 7 Op 5 . + CDS 9235 - 9678 328 ## HMPREF0675_3279 type II secretion system F domain protein 14 8 Tu 1 . + CDS 9887 - 10174 204 ## HMPREF0675_3280 hypothetical protein + Prom 10176 - 10235 80.3 15 9 Op 1 . + CDS 10346 - 10663 159 ## HMPREF0675_3281 hypothetical protein 16 9 Op 2 . + CDS 10837 - 11067 90 ## HMPREF0675_3282 TadE-like protein 17 9 Op 3 . + CDS 11162 - 11419 120 ## HMPREF0675_3283 hypothetical protein 18 10 Tu 1 . - CDS 11480 - 13501 921 ## COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster 19 11 Op 1 . + CDS 13768 - 15285 941 ## COG2890 Methylase of polypeptide chain release factors + Prom 15295 - 15354 1.7 20 11 Op 2 . + CDS 15378 - 15665 322 ## HMPREF0675_3286 hypothetical protein 21 12 Op 1 . + CDS 15888 - 18677 2705 ## COG0550 Topoisomerase IA 22 12 Op 2 . + CDS 18679 - 20166 745 ## HMPREF0675_3288 hypothetical protein 23 12 Op 3 22/0.000 + CDS 20159 - 20803 406 ## COG0125 Thymidylate kinase 24 12 Op 4 . + CDS 20859 - 22058 527 ## COG0470 ATPase involved in DNA replication + Term 22107 - 22131 -1.0 25 13 Op 1 . + CDS 22190 - 22996 749 ## HMPREF0675_3291 DoxX protein 26 13 Op 2 . + CDS 23071 - 23733 142 ## COG1774 Uncharacterized homolog of PSP1 27 13 Op 3 . + CDS 23750 - 25432 835 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 28 13 Op 4 . + CDS 25521 - 25853 278 ## HMPREF0675_3294 hypothetical protein 29 14 Tu 1 . - CDS 25887 - 27536 1388 ## COG4805 Uncharacterized protein conserved in bacteria - Prom 27711 - 27770 78.5 + TRNA 27694 - 27769 90.5 # Thr CGT 0 0 + Prom 27695 - 27754 77.8 30 15 Op 1 . + CDS 27974 - 29323 1026 ## COG1231 Monoamine oxidase 31 15 Op 2 . + CDS 29625 - 30668 349 ## PPA0251 hypothetical protein + Term 30706 - 30739 0.5 32 16 Tu 1 . - CDS 30686 - 31171 401 ## COG2062 Phosphohistidine phosphatase SixA 33 17 Tu 1 . + CDS 31219 - 32208 448 ## COG3458 Acetyl esterase (deacetylase) 34 18 Tu 1 . - CDS 32224 - 33237 682 ## HMPREF0675_3302 hypothetical protein - Term 33248 - 33295 5.5 35 19 Tu 1 . - CDS 33348 - 33902 511 ## COG0221 Inorganic pyrophosphatase 36 20 Op 1 2/0.103 + CDS 34029 - 35402 907 ## COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) 37 20 Op 2 10/0.000 + CDS 35402 - 36337 641 ## COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 38 20 Op 3 11/0.000 + CDS 36365 - 36919 566 ## COG0634 Hypoxanthine-guanine phosphoribosyltransferase 39 20 Op 4 4/0.069 + CDS 37061 - 39214 1295 ## PROTEIN SUPPORTED gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 + Term 39219 - 39265 10.1 40 21 Op 1 . + CDS 39279 - 39854 415 ## COG0302 GTP cyclohydrolase I 41 21 Op 2 . + CDS 39918 - 40220 195 ## PPA0262 hypothetical protein + Prom 40332 - 40391 3.1 42 22 Op 1 . + CDS 40462 - 41568 771 ## COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins 43 22 Op 2 . + CDS 41568 - 42206 361 ## HMPREF0675_3312 hypothetical protein 44 23 Op 1 . + CDS 42410 - 42934 318 ## HMPREF0675_3313 hypothetical protein 45 23 Op 2 . + CDS 42964 - 43416 202 ## PPA0267 hypothetical protein + Prom 43517 - 43576 2.2 46 24 Op 1 . + CDS 43606 - 44580 620 ## HMPREF0675_3315 hypothetical protein 47 24 Op 2 . + CDS 44561 - 45193 408 ## PPA0270 hypothetical protein 48 24 Op 3 15/0.000 + CDS 45249 - 46094 844 ## COG0294 Dihydropteroate synthase and related enzymes 49 24 Op 4 17/0.000 + CDS 46155 - 46517 156 ## PROTEIN SUPPORTED gi|148994682|ref|ZP_01823786.1| 50S ribosomal protein L13 50 24 Op 5 . + CDS 46514 - 47071 424 ## COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 51 24 Op 6 . + CDS 47068 - 47604 385 ## HMPREF0675_3320 hypothetical protein 52 24 Op 7 . + CDS 47687 - 48364 632 ## PPA0275 hypothetical protein + Term 48386 - 48428 12.2 53 25 Tu 1 . - CDS 48441 - 49601 507 ## COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7 - Prom 49702 - 49761 2.8 + Prom 49666 - 49725 2.7 54 26 Tu 1 . + CDS 49770 - 50087 266 ## HMPREF0675_3323 hypothetical protein + Term 50121 - 50173 15.7 + Prom 50156 - 50215 40.6 55 27 Tu 1 . + CDS 50418 - 52952 2464 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 56 28 Op 1 . - CDS 53005 - 54012 570 ## HMPREF0675_3325 hypothetical protein 57 28 Op 2 6/0.000 - CDS 54009 - 54995 952 ## COG3817 Predicted membrane protein 58 28 Op 3 . - CDS 54992 - 55756 773 ## COG3819 Predicted membrane protein - Prom 55850 - 55909 1.8 59 29 Op 1 . + CDS 55656 - 55847 64 ## 60 29 Op 2 8/0.000 + CDS 55879 - 56649 688 ## COG1540 Uncharacterized proteins, homologs of lactam utilization protein B 61 29 Op 3 21/0.000 + CDS 56646 - 57266 287 ## COG2049 Allophanate hydrolase subunit 1 62 29 Op 4 . + CDS 57263 - 58132 267 ## COG1984 Allophanate hydrolase subunit 2 + Term 58214 - 58272 3.7 63 30 Op 1 . + CDS 58296 - 59783 1161 ## COG0477 Permeases of the major facilitator superfamily 64 30 Op 2 . + CDS 59851 - 60750 534 ## COG1090 Predicted nucleoside-diphosphate sugar epimerase 65 30 Op 3 . + CDS 60747 - 61655 550 ## COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) + Term 61895 - 61936 0.0 66 31 Op 1 . - CDS 61673 - 62227 231 ## COG0563 Adenylate kinase and related kinases 67 31 Op 2 19/0.000 - CDS 62301 - 62957 526 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 68 31 Op 3 . - CDS 63037 - 64269 811 ## COG4585 Signal transduction histidine kinase 69 32 Op 1 . + CDS 64313 - 64510 60 ## gi|327456632|gb|EGF03287.1| hypothetical protein HMPREF9586_01012 70 32 Op 2 . + CDS 64420 - 65016 594 ## PPA0291 hypothetical protein + Term 65047 - 65100 17.8 71 33 Op 1 7/0.000 - CDS 65222 - 66175 621 ## COG3711 Transcriptional antiterminator 72 33 Op 2 3/0.069 - CDS 66138 - 66611 222 ## COG2190 Phosphotransferase system IIA components 73 33 Op 3 3/0.069 - CDS 66623 - 68149 1447 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 74 33 Op 4 . - CDS 68151 - 68444 357 ## COG3010 Putative N-acetylmannosamine-6-phosphate epimerase 75 34 Tu 1 . + CDS 68443 - 68559 72 ## gi|332674703|gb|AEE71519.1| hypothetical protein PAZ_c03170 - Term 68690 - 68718 -0.9 76 35 Op 1 . - CDS 68739 - 69026 81 ## gi|332674704|gb|AEE71520.1| putative sugar transporter 77 35 Op 2 . - CDS 68984 - 69166 81 ## HMPREF0675_3342 hypothetical protein 78 36 Op 1 . - CDS 69321 - 70196 456 ## COG1194 A/G-specific DNA glycosylase 79 36 Op 2 7/0.000 - CDS 70189 - 71499 1071 ## COG0001 Glutamate-1-semialdehyde aminotransferase 80 36 Op 3 . - CDS 71547 - 72593 929 ## COG0113 Delta-aminolevulinic acid dehydratase 81 36 Op 4 . - CDS 72623 - 73348 495 ## HMPREF0675_3346 uroporphyrinogen-III synthase (EC:4.2.1.75) 82 36 Op 5 . - CDS 73345 - 74349 541 ## COG0181 Porphobilinogen deaminase 83 36 Op 6 3/0.069 - CDS 74396 - 75826 704 ## COG1232 Protoporphyrinogen oxidase 84 36 Op 7 . - CDS 75841 - 76881 720 ## COG0407 Uroporphyrinogen-III decarboxylase - Prom 76964 - 77023 2.1 + Prom 76923 - 76982 2.0 85 37 Op 1 . + CDS 77017 - 78372 910 ## COG0373 Glutamyl-tRNA reductase 86 37 Op 2 . + CDS 78362 - 80413 1258 ## COG0276 Protoheme ferro-lyase (ferrochelatase) 87 38 Tu 1 . - CDS 80358 - 80903 107 ## gi|332674713|gb|AEE71529.1| hypothetical protein PAZ_c03290 88 39 Tu 1 . + CDS 80737 - 81117 337 ## HMPREF0675_3352 hypothetical protein - Term 80946 - 80975 1.4 89 40 Op 1 7/0.000 - CDS 81153 - 82253 567 ## PROTEIN SUPPORTED gi|163764769|ref|ZP_02171823.1| ribosomal protein L18 90 40 Op 2 . - CDS 82306 - 83703 922 ## COG1066 Predicted ATP-dependent serine protease 91 40 Op 3 . - CDS 83769 - 85394 1213 ## COG0281 Malic enzyme 92 40 Op 4 . - CDS 85479 - 86117 470 ## PPA0314 hypothetical protein 93 41 Op 1 . + CDS 86269 - 87156 482 ## COG1082 Sugar phosphate isomerases/epimerases 94 41 Op 2 . + CDS 87219 - 88115 450 ## COG0506 Proline dehydrogenase 95 42 Op 1 . + CDS 88251 - 88976 530 ## COG1266 Predicted metal-dependent membrane protease 96 42 Op 2 . + CDS 89021 - 90064 661 ## COG0136 Aspartate-semialdehyde dehydrogenase 97 42 Op 3 . + CDS 90097 - 90852 605 ## COG0345 Pyrroline-5-carboxylate reductase 98 42 Op 4 . + CDS 90916 - 91089 115 ## 99 42 Op 5 . + CDS 91109 - 91450 194 ## PPA0321 hypothetical protein 100 43 Op 1 . + CDS 91574 - 93289 1122 ## COG1587 Uroporphyrinogen-III synthase 101 43 Op 2 4/0.069 + CDS 93360 - 94028 398 ## COG0406 Fructose-2,6-bisphosphatase 102 43 Op 3 13/0.000 + CDS 94025 - 94594 365 ## COG0526 Thiol-disulfide isomerase and thioredoxins 103 43 Op 4 4/0.069 + CDS 94642 - 95352 545 ## COG0785 Cytochrome c biogenesis protein 104 43 Op 5 8/0.000 + CDS 95430 - 96941 1074 ## COG1333 ResB protein required for cytochrome c biosynthesis 105 43 Op 6 . + CDS 96938 - 97831 798 ## COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component 106 43 Op 7 . + CDS 97818 - 99281 1079 ## PPA0329 putative sigma subunit 107 44 Tu 1 . - CDS 99293 - 100087 571 ## COG0300 Short-chain dehydrogenases of various substrate specificities 108 45 Tu 1 . - CDS 100304 - 100795 118 ## PPA0331 hypothetical protein 109 46 Tu 1 . - CDS 101587 - 102291 448 ## HMPREF0675_3373 hypothetical protein 110 47 Tu 1 . + CDS 102415 - 103815 415 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 111 48 Op 1 14/0.000 - CDS 103898 - 104914 969 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 112 48 Op 2 35/0.000 - CDS 104926 - 105684 231 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 113 48 Op 3 . - CDS 105681 - 106715 777 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 114 49 Tu 1 . + CDS 106597 - 106902 122 ## 115 50 Tu 1 . - CDS 106944 - 107831 593 ## COG2375 Siderophore-interacting protein 116 51 Op 1 41/0.000 - CDS 108058 - 108834 201 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 117 51 Op 2 38/0.000 - CDS 108853 - 109779 905 ## COG0581 ABC-type phosphate transport system, permease component 118 51 Op 3 39/0.000 - CDS 109776 - 110729 802 ## COG0573 ABC-type phosphate transport system, permease component 119 51 Op 4 . - CDS 110889 - 112040 1109 ## COG0226 ABC-type phosphate transport system, periplasmic component 120 52 Op 1 3/0.069 - CDS 112213 - 113154 570 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 121 52 Op 2 . - CDS 113162 - 115267 1660 ## COG0855 Polyphosphate kinase 122 53 Tu 1 . - CDS 115389 - 116033 542 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 123 54 Tu 1 . + CDS 116038 - 117045 371 ## HMPREF0675_3387 hypothetical protein 124 55 Tu 1 . - CDS 117060 - 117497 355 ## COG1490 D-Tyr-tRNAtyr deacylase 125 56 Op 1 . + CDS 117693 - 118193 454 ## HMPREF0675_3389 hypothetical protein 126 56 Op 2 . + CDS 118195 - 119136 595 ## COG0354 Predicted aminomethyltransferase related to GcvT 127 56 Op 3 . + CDS 119177 - 120562 1289 ## COG2148 Sugar transferases involved in lipopolysaccharide synthesis + Term 120565 - 120614 1.9 128 57 Tu 1 . - CDS 120585 - 121322 766 ## COG4221 Short-chain alcohol dehydrogenase of unknown specificity - Term 121346 - 121374 1.3 129 58 Op 1 25/0.000 - CDS 121398 - 123071 1379 ## COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) 130 58 Op 2 . - CDS 123076 - 123342 278 ## COG1925 Phosphotransferase system, HPr-related proteins + Prom 123149 - 123208 1.5 131 59 Op 1 19/0.000 + CDS 123438 - 124241 223 ## PROTEIN SUPPORTED gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 132 59 Op 2 . + CDS 124241 - 124744 266 ## COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 133 60 Tu 1 . - CDS 124691 - 125095 387 ## COG3731 Phosphotransferase system sorbitol-specific component IIA + Prom 125121 - 125180 4.3 134 61 Tu 1 . + CDS 125333 - 125575 162 ## HMPREF0675_3397 PTS system, lactose/cellobiose specific IIB subunit + Term 125608 - 125651 10.5 - Term 125585 - 125646 11.3 135 62 Tu 1 . - CDS 125659 - 126144 555 ## COG1329 Transcriptional regulators, similar to M. xanthus CarD - Prom 126165 - 126224 6.1 + Prom 126149 - 126208 2.9 136 63 Tu 1 . + CDS 126329 - 126889 462 ## HMPREF0675_3399 hypothetical protein + Term 127026 - 127060 2.2 137 64 Op 1 40/0.000 - CDS 126942 - 127622 611 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 138 64 Op 2 . - CDS 127619 - 128785 671 ## COG0642 Signal transduction histidine kinase 139 65 Tu 1 . + CDS 128961 - 129629 639 ## COG0704 Phosphate uptake regulator + Term 129638 - 129684 13.1 + Prom 129665 - 129724 3.7 140 66 Tu 1 . + CDS 129775 - 130845 851 ## COG0726 Predicted xylanase/chitin deacetylase - Term 130760 - 130797 -1.0 141 67 Tu 1 . - CDS 130937 - 131686 822 ## COG0588 Phosphoglycerate mutase 1 142 68 Op 1 13/0.000 - CDS 131811 - 132269 374 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 143 68 Op 2 . - CDS 132514 - 132807 330 ## COG3414 Phosphotransferase system, galactitol-specific IIB component 144 69 Op 1 1/0.172 - CDS 133014 - 134006 876 ## COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D 145 69 Op 2 . - CDS 134010 - 135458 1130 ## COG1113 Gamma-aminobutyrate permease and related permeases 146 69 Op 3 . - CDS 135503 - 135724 120 ## 147 70 Tu 1 . - CDS 135834 - 137309 1525 ## COG0112 Glycine/serine hydroxymethyltransferase - Term 137374 - 137408 6.7 148 71 Op 1 8/0.000 - CDS 137423 - 138529 862 ## COG0524 Sugar kinases, ribokinase family 149 71 Op 2 . - CDS 138526 - 139173 494 ## COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase - Prom 139403 - 139462 1.8 150 72 Op 1 . + CDS 139586 - 139723 83 ## gi|313765535|gb|EFS36899.1| hypothetical protein HMPREF9567_00251 151 72 Op 2 . + CDS 139733 - 139882 87 ## gi|313765534|gb|EFS36898.1| hypothetical protein HMPREF9567_00250 + Prom 139894 - 139953 2.2 152 73 Op 1 . + CDS 140202 - 140390 166 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases 153 73 Op 2 . + CDS 140377 - 140538 61 ## PPA0379 putative dehydrogenase + Term 140731 - 140770 2.1 154 74 Op 1 . - CDS 140618 - 143098 1457 ## HMPREF0675_3415 hyaluronate lyase 155 74 Op 2 . - CDS 143155 - 143352 68 ## gi|313793056|gb|EFS41123.1| hypothetical protein HMPREF9575_01151 156 75 Tu 1 . + CDS 143477 - 143749 137 ## PPA0381 hypothetical protein 157 76 Op 1 . + CDS 143856 - 144080 91 ## PPA0381 hypothetical protein 158 76 Op 2 . + CDS 144179 - 145030 408 ## HMPREF0675_3416 hypothetical protein + Term 145274 - 145313 0.3 - Term 145387 - 145431 0.1 159 77 Op 1 7/0.000 - CDS 145546 - 146502 686 ## COG0566 rRNA methylases 160 77 Op 2 . - CDS 146516 - 147988 1030 ## COG0215 Cysteinyl-tRNA synthetase 161 78 Tu 1 . + CDS 147995 - 148213 199 ## PPA0385 hypothetical protein + Term 148298 - 148340 5.5 162 79 Tu 1 . - CDS 148224 - 149558 923 ## HMPREF0675_3421 hypothetical protein 163 80 Op 1 . + CDS 149894 - 150412 512 ## COG1302 Uncharacterized protein conserved in bacteria 164 80 Op 2 . + CDS 150424 - 150609 253 ## HMPREF0675_3423 hypothetical protein 165 80 Op 3 . + CDS 150609 - 151022 204 ## HMPREF0675_3424 hypothetical protein 166 80 Op 4 . + CDS 151024 - 151578 377 ## HMPREF0675_3425 hypothetical protein 167 80 Op 5 . + CDS 151575 - 152291 432 ## HMPREF0675_3426 hypothetical protein 168 80 Op 6 . + CDS 152348 - 152923 122 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 169 80 Op 7 . + CDS 152914 - 153438 245 ## PPA0393 hypothetical protein 170 80 Op 8 . + CDS 153431 - 153784 285 ## HMPREF0675_3429 hypothetical protein - Term 153788 - 153838 15.0 171 81 Tu 1 . - CDS 153850 - 154950 1015 ## COG3839 ABC-type sugar transport systems, ATPase components 172 82 Tu 1 . + CDS 155062 - 155289 91 ## gi|313824245|gb|EFS61959.1| conserved domain protein 173 83 Tu 1 . - CDS 155703 - 157226 1148 ## COG1760 L-serine deaminase - Prom 157352 - 157411 1.9 174 84 Op 1 . + CDS 157077 - 157394 75 ## gi|289424404|ref|ZP_06426187.1| conserved domain protein + Term 157398 - 157435 0.7 175 84 Op 2 2/0.103 + CDS 157481 - 159790 1284 ## COG0673 Predicted dehydrogenases and related proteins 176 84 Op 3 35/0.000 + CDS 159813 - 161105 1101 ## COG1653 ABC-type sugar transport system, periplasmic component 177 84 Op 4 38/0.000 + CDS 161102 - 162058 776 ## COG1175 ABC-type sugar transport systems, permease components 178 84 Op 5 5/0.000 + CDS 162051 - 162941 599 ## COG0395 ABC-type sugar transport system, permease component 179 84 Op 6 9/0.000 + CDS 163295 - 164332 855 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 180 84 Op 7 . + CDS 164358 - 165554 1168 ## COG0156 7-keto-8-aminopelargonate synthetase and related enzymes + Term 165561 - 165597 4.2 181 85 Op 1 13/0.000 - CDS 165571 - 166479 644 ## COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) 182 85 Op 2 3/0.069 - CDS 166516 - 167211 597 ## COG1174 ABC-type proline/glycine betaine transport systems, permease component 183 85 Op 3 24/0.000 - CDS 167208 - 167774 389 ## COG1174 ABC-type proline/glycine betaine transport systems, permease component 184 85 Op 4 . - CDS 167852 - 168688 360 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 185 86 Op 1 . + CDS 168850 - 169638 772 ## PPA0408 hypothetical protein 186 86 Op 2 . + CDS 169663 - 170025 378 ## COG3189 Uncharacterized conserved protein 187 87 Tu 1 . - CDS 170056 - 170571 444 ## COG2110 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 188 88 Tu 1 . + CDS 170689 - 171705 819 ## COG2130 Putative NADP-dependent oxidoreductases 189 89 Op 1 45/0.000 + CDS 171837 - 172784 646 ## COG1131 ABC-type multidrug transport system, ATPase component 190 89 Op 2 6/0.000 + CDS 172781 - 173530 676 ## COG0842 ABC-type multidrug transport system, permease component 191 89 Op 3 19/0.000 + CDS 173624 - 174760 849 ## COG4585 Signal transduction histidine kinase 192 89 Op 4 . + CDS 174765 - 175385 504 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 193 90 Op 1 . - CDS 175534 - 175683 58 ## gi|313802536|gb|EFS43758.1| hypothetical protein HMPREF9576_00989 194 90 Op 2 . - CDS 175658 - 176155 295 ## COG0406 Fructose-2,6-bisphosphatase 195 91 Op 1 2/0.103 + CDS 176282 - 177310 569 ## COG1270 Cobalamin biosynthesis protein CobD/CbiB 196 91 Op 2 . + CDS 177328 - 178782 931 ## COG1492 Cobyric acid synthase + Term 178925 - 178958 -0.9 197 92 Op 1 9/0.000 + CDS 179109 - 179864 750 ## COG2243 Precorrin-2 methylase 198 92 Op 2 2/0.103 + CDS 179861 - 180832 810 ## COG2875 Precorrin-4 methylase 199 92 Op 3 2/0.103 + CDS 180829 - 183393 1970 ## COG1010 Precorrin-3B methylase 200 92 Op 4 . + CDS 183396 - 184664 1002 ## COG2138 Uncharacterized conserved protein 201 92 Op 5 . + CDS 184706 - 185572 559 ## HMPREF0675_3457 hypothetical protein 202 92 Op 6 . + CDS 185617 - 185829 68 ## 203 93 Op 1 . + CDS 186276 - 186515 62 ## HMPREF0675_3459 hypothetical protein 204 93 Op 2 35/0.000 + CDS 186490 - 187554 716 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 205 93 Op 3 14/0.000 + CDS 187551 - 188342 209 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 206 93 Op 4 . + CDS 188344 - 189414 942 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component + Term 189540 - 189568 -1.0 207 94 Op 1 . - CDS 189504 - 190730 545 ## COG1373 Predicted ATPase (AAA+ superfamily) 208 94 Op 2 . - CDS 190823 - 191476 582 ## COG2082 Precorrin isomerase - Prom 191518 - 191577 2.8 209 95 Op 1 4/0.069 + CDS 191782 - 192465 752 ## COG0310 ABC-type Co2+ transport system, permease component 210 95 Op 2 8/0.000 + CDS 192458 - 192892 474 ## COG1930 ABC-type cobalt transport system, periplasmic component 211 95 Op 3 34/0.000 + CDS 192889 - 193734 600 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 212 95 Op 4 . + CDS 193731 - 194567 613 ## COG1122 ABC-type cobalt transport system, ATPase component 213 95 Op 5 . + CDS 194629 - 195309 506 ## HMPREF0675_3469 hypothetical protein + Term 195396 - 195427 1.5 214 96 Tu 1 . - CDS 195336 - 195932 496 ## COG2242 Precorrin-6B methylase 2 215 97 Op 1 5/0.000 + CDS 196160 - 196774 406 ## COG2109 ATP:corrinoid adenosyltransferase 216 97 Op 2 4/0.069 + CDS 196774 - 199197 1529 ## COG1797 Cobyrinic acid a,c-diamide synthase 217 97 Op 3 . + CDS 199207 - 199983 800 ## COG0007 Uroporphyrinogen-III methylase - Term 199890 - 199943 3.1 218 98 Tu 1 . - CDS 200003 - 200755 460 ## COG2099 Precorrin-6x reductase 219 99 Op 1 11/0.000 + CDS 200982 - 202649 1089 ## COG2038 NaMN:DMB phosphoribosyltransferase 220 99 Op 2 . + CDS 202646 - 203485 430 ## COG0368 Cobalamin-5-phosphate synthase 221 99 Op 3 . + CDS 203482 - 204246 326 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component + Term 204472 - 204505 -0.4 + TRNA 204303 - 204378 88.6 # Thr TGT 0 0 222 100 Tu 1 . - CDS 204468 - 206105 1107 ## HMPREF0675_3479 hypothetical protein + Prom 205786 - 205845 2.3 223 101 Tu 1 . + CDS 206038 - 206166 61 ## 224 102 Tu 1 . + CDS 206308 - 206514 69 ## gi|313765457|gb|EFS36821.1| hypothetical protein HMPREF9567_00172 + Term 206589 - 206640 -1.0 225 103 Op 1 2/0.103 - CDS 206762 - 208351 1144 ## COG3037 Uncharacterized protein conserved in bacteria 226 103 Op 2 . - CDS 208401 - 209165 376 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 227 103 Op 3 . - CDS 209233 - 209388 139 ## PPA0450 S-ribosylhomocysteinase (EC:3.13.1.-) 228 103 Op 4 6/0.000 - CDS 209465 - 209641 73 ## COG3335 Transposase and inactivated derivatives 229 103 Op 5 . - CDS 209608 - 209844 76 ## COG3335 Transposase and inactivated derivatives 230 104 Tu 1 . - CDS 209977 - 210339 66 ## gi|313772999|gb|EFS38965.1| conserved domain protein + Prom 210117 - 210176 3.9 231 105 Tu 1 . + CDS 210224 - 210610 125 ## PPA0448 hypothetical protein 232 106 Tu 1 . - CDS 210509 - 210706 123 ## gi|327447085|gb|EGE93739.1| conserved domain protein - Prom 210760 - 210819 1.8 + Prom 210652 - 210711 2.5 233 107 Tu 1 . + CDS 210731 - 211177 434 ## PPA0449 hypothetical protein + Term 211212 - 211244 3.3 - Term 211145 - 211189 -0.1 234 108 Op 1 . - CDS 211328 - 211981 459 ## COG1854 LuxS protein involved in autoinducer AI2 synthesis 235 108 Op 2 . - CDS 211848 - 213029 719 ## COG1482 Phosphomannose isomerase 236 108 Op 3 . - CDS 213073 - 213357 88 ## HMPREF0675_3490 hypothetical protein 237 108 Op 4 . - CDS 213367 - 213636 60 ## gi|313802580|gb|EFS43802.1| conserved domain protein - Prom 213877 - 213936 2.0 238 109 Tu 1 . + CDS 213691 - 215325 1589 ## PROTEIN SUPPORTED gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 + Term 215348 - 215396 16.0 239 110 Tu 1 . - CDS 215460 - 216536 1028 ## COG0176 Transaldolase 240 111 Op 1 . - CDS 216638 - 217381 405 ## COG2188 Transcriptional regulators 241 111 Op 2 . - CDS 217356 - 217574 141 ## gi|315093919|gb|EFT65895.1| hypothetical protein HMPREF9582_00225 + Prom 217506 - 217565 3.8 242 112 Op 1 . + CDS 217596 - 218585 644 ## COG0524 Sugar kinases, ribokinase family 243 112 Op 2 . + CDS 218582 - 219469 502 ## PPA0457 hypothetical protein 244 112 Op 3 1/0.172 + CDS 219466 - 220338 405 ## COG3718 Uncharacterized enzyme involved in inositol metabolism 245 112 Op 4 . + CDS 220341 - 222239 1112 ## COG3962 Acetolactate synthase - Term 222178 - 222213 -0.1 246 113 Tu 1 . - CDS 222384 - 222620 293 ## PPA0460 hypothetical protein - Prom 222730 - 222789 2.0 247 114 Op 1 . + CDS 222619 - 222924 103 ## gi|315092658|gb|EFT64634.1| hypothetical protein HMPREF9578_01511 248 114 Op 2 . + CDS 222987 - 224480 1340 ## COG1012 NAD-dependent aldehyde dehydrogenases 249 114 Op 3 6/0.000 + CDS 224576 - 225556 491 ## COG1609 Transcriptional regulators + Term 225563 - 225600 1.5 + Prom 225572 - 225631 2.3 250 114 Op 4 9/0.000 + CDS 225693 - 226175 112 ## COG0673 Predicted dehydrogenases and related proteins 251 114 Op 5 16/0.000 + CDS 226234 - 226896 471 ## COG0673 Predicted dehydrogenases and related proteins 252 114 Op 6 2/0.103 + CDS 226941 - 227939 541 ## COG1082 Sugar phosphate isomerases/epimerases 253 114 Op 7 16/0.000 + CDS 228011 - 228877 685 ## COG1082 Sugar phosphate isomerases/epimerases 254 114 Op 8 5/0.000 + CDS 229087 - 230298 659 ## COG0673 Predicted dehydrogenases and related proteins 255 114 Op 9 . + CDS 230447 - 232054 1569 ## COG0477 Permeases of the major facilitator superfamily 256 115 Op 1 . - CDS 232342 - 232566 64 ## gi|314964367|gb|EFT08467.1| hypothetical protein HMPREF9618_00320 257 115 Op 2 . - CDS 232663 - 233526 780 ## COG1082 Sugar phosphate isomerases/epimerases - Prom 233577 - 233636 2.2 258 116 Op 1 . + CDS 233504 - 233689 82 ## 259 116 Op 2 . + CDS 233724 - 234710 790 ## COG0673 Predicted dehydrogenases and related proteins 260 117 Op 1 . + CDS 234916 - 235725 429 ## COG1266 Predicted metal-dependent membrane protease 261 117 Op 2 . + CDS 235712 - 236398 418 ## COG3142 Uncharacterized protein involved in copper resistance 262 118 Op 1 . - CDS 236412 - 237416 746 ## PPA0472 hypothetical protein 263 118 Op 2 . - CDS 237460 - 239118 1139 ## COG1061 DNA or RNA helicases of superfamily II 264 119 Op 1 . - CDS 239750 - 241879 1117 ## HMPREF0675_3517 hypothetical protein 265 119 Op 2 . - CDS 241876 - 242631 340 ## HMPREF0675_3518 hypothetical protein 266 120 Tu 1 . + CDS 242805 - 243590 697 ## COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase 267 121 Op 1 . + CDS 243737 - 244120 387 ## COG1278 Cold shock proteins 268 121 Op 2 . + CDS 244120 - 244920 483 ## PPA0478 hypothetical protein 269 122 Tu 1 . - CDS 244958 - 245230 295 ## HMPREF0675_3522 hypothetical protein + Prom 245187 - 245246 3.0 270 123 Tu 1 . + CDS 245354 - 246757 1359 ## COG2252 Permeases 271 124 Tu 1 . - CDS 246732 - 247442 329 ## HMPREF0675_3524 hypothetical protein + Prom 247406 - 247465 1.6 272 125 Tu 1 . + CDS 247585 - 248589 622 ## PPA0482 hypothetical protein 273 126 Tu 1 . - CDS 248586 - 249749 722 ## COG1932 Phosphoserine aminotransferase - Prom 249928 - 249987 1.9 274 127 Tu 1 . + CDS 249797 - 250927 740 ## COG1820 N-acetylglucosamine-6-phosphate deacetylase + Term 250976 - 251014 -0.9 275 128 Op 1 . + CDS 251081 - 251779 433 ## COG1321 Mn-dependent transcriptional regulator 276 128 Op 2 . + CDS 251800 - 252879 590 ## HMPREF0675_3529 hypothetical protein + Term 252898 - 252937 0.7 277 128 Op 3 . + CDS 253001 - 253366 335 ## COG0526 Thiol-disulfide isomerase and thioredoxins + Term 253403 - 253457 12.3 278 129 Tu 1 . - CDS 253262 - 253453 145 ## 279 130 Tu 1 . + CDS 253538 - 255154 1180 ## COG0477 Permeases of the major facilitator superfamily 280 131 Tu 1 . - CDS 255151 - 255357 97 ## - TRNA 255234 - 255306 73.8 # Arg CCT 0 0 281 132 Tu 1 . - CDS 255461 - 255715 119 ## gi|313831952|gb|EFS69666.1| conserved domain protein + Prom 255563 - 255622 3.0 282 133 Op 1 . + CDS 255648 - 257045 1373 ## COG4284 UDP-glucose pyrophosphorylase 283 133 Op 2 . + CDS 257072 - 257413 66 ## HMPREF0675_3535 hypothetical protein + Term 257489 - 257522 -0.8 284 134 Tu 1 . - CDS 257436 - 257804 481 ## COG1970 Large-conductance mechanosensitive channel 285 135 Tu 1 . - CDS 257905 - 258480 298 ## PPA0492 hypothetical protein 286 136 Op 1 3/0.069 - CDS 258641 - 258943 158 ## COG2331 Uncharacterized protein conserved in bacteria 287 136 Op 2 . - CDS 259021 - 259530 405 ## COG0212 5-formyltetrahydrofolate cyclo-ligase 288 137 Op 1 3/0.069 + CDS 259718 - 261025 580 ## COG0303 Molybdopterin biosynthesis enzyme 289 137 Op 2 . + CDS 261087 - 261737 420 ## PROTEIN SUPPORTED gi|229849629|ref|ZP_04469689.1| acetyltransferase, ribosomal protein N-acetylase 290 137 Op 3 . + CDS 261810 - 262613 426 ## PPA0496 hypothetical protein + Term 262847 - 262913 30.0 + TRNA 262829 - 262901 82.0 # Ala CGC 0 0 291 138 Tu 1 . - CDS 262890 - 263093 125 ## 292 139 Op 1 . - CDS 263352 - 264029 473 ## COG3381 Uncharacterized component of anaerobic dehydrogenases 293 139 Op 2 5/0.000 - CDS 264026 - 264511 428 ## COG0315 Molybdenum cofactor biosynthesis enzyme 294 139 Op 3 1/0.172 - CDS 264477 - 265619 619 ## COG0303 Molybdopterin biosynthesis enzyme 295 140 Op 1 . - CDS 265808 - 266230 271 ## COG0314 Molybdopterin converting factor, large subunit 296 140 Op 2 . - CDS 266231 - 266470 227 ## HMPREF0675_3548 ThiS family protein 297 140 Op 3 . - CDS 266473 - 267513 653 ## COG2896 Molybdenum cofactor biosynthesis enzyme - Prom 267738 - 267797 3.1 298 141 Tu 1 . + CDS 267418 - 267615 112 ## HMPREF0675_3549 hypothetical protein 299 142 Op 1 . + CDS 267756 - 268184 317 ## PPA0503 putative molybdopterin-binding protein 300 142 Op 2 . + CDS 268190 - 268960 517 ## COG0725 ABC-type molybdate transport system, periplasmic component 301 143 Tu 1 . - CDS 268840 - 269079 85 ## 302 144 Tu 1 . + CDS 269126 - 270898 284 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 303 145 Op 1 . - CDS 270832 - 271551 211 ## PPA0506 putative regulator 304 145 Op 2 12/0.000 - CDS 271553 - 272266 245 ## COG2181 Nitrate reductase gamma subunit 305 145 Op 3 12/0.000 - CDS 272263 - 272934 344 ## COG2180 Nitrate reductase delta subunit 306 145 Op 4 13/0.000 - CDS 272936 - 274459 747 ## COG1140 Nitrate reductase beta subunit 307 145 Op 5 10/0.000 - CDS 274459 - 278196 2304 ## COG5013 Nitrate reductase alpha subunit 308 145 Op 6 . - CDS 278254 - 279624 1053 ## COG2223 Nitrate/nitrite transporter 309 146 Tu 1 . + CDS 279547 - 280431 344 ## HMPREF0675_3558 hypothetical protein + Term 280585 - 280622 0.8 310 147 Tu 1 . + CDS 280728 - 281228 199 ## PROTEIN SUPPORTED gi|134277849|ref|ZP_01764564.1| ribosomal protein S16 + Term 281295 - 281333 2.1 311 148 Tu 1 . + CDS 281398 - 281673 238 ## PPA0514 putative molybdopterin-guanine dinucleotide biosynthesis protein 312 149 Op 1 9/0.000 - CDS 281737 - 282747 721 ## COG3302 DMSO reductase anchor subunit 313 149 Op 2 16/0.000 - CDS 282747 - 283388 465 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 - Prom 283439 - 283498 2.1 314 149 Op 3 . - CDS 283555 - 284832 930 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 315 150 Tu 1 . + CDS 284752 - 285105 61 ## 316 151 Tu 1 . - CDS 285588 - 286145 283 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing - Prom 286196 - 286255 2.2 - Term 286479 - 286513 3.1 317 152 Op 1 5/0.000 - CDS 286569 - 287396 628 ## COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 318 152 Op 2 . - CDS 287411 - 288244 485 ## COG2022 Uncharacterized enzyme of thiazole biosynthesis 319 152 Op 3 . - CDS 288286 - 288555 68 ## HMPREF0675_3568 thiamine biosynthesis protein ThiS 320 152 Op 4 . - CDS 288562 - 289809 677 ## COG0665 Glycine/D-amino acid oxidases (deaminating) - Term 290062 - 290096 2.7 321 153 Tu 1 . - CDS 290191 - 290505 320 ## HMPREF0675_3571 hypothetical protein 322 154 Tu 1 . + CDS 290525 - 290758 67 ## gi|313765362|gb|EFS36726.1| conserved domain protein 323 155 Op 1 . - CDS 290765 - 292210 542 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 324 155 Op 2 . - CDS 292293 - 293822 991 ## COG1928 Dolichyl-phosphate-mannose--protein O-mannosyl transferase 325 156 Op 1 . + CDS 293679 - 294797 768 ## COG0313 Predicted methyltransferases 326 156 Op 2 1/0.172 + CDS 294794 - 295702 565 ## COG0084 Mg-dependent DNase 327 156 Op 3 6/0.000 + CDS 295699 - 296595 697 ## COG0030 Dimethyladenosine transferase (rRNA methylation) 328 156 Op 4 . + CDS 296628 - 297590 491 ## COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase 329 156 Op 5 . + CDS 297587 - 298126 305 ## COG1846 Transcriptional regulators 330 157 Tu 1 . - CDS 298108 - 298791 393 ## COG1309 Transcriptional regulator - Prom 298892 - 298951 80.4 + TRNA 298874 - 298952 39.0 # Gln TTG 0 0 + Prom 298874 - 298933 80.3 331 158 Op 1 11/0.000 + CDS 299041 - 300339 1109 ## COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) 332 158 Op 2 . + CDS 300372 - 301304 950 ## COG0462 Phosphoribosylpyrophosphate synthetase 333 159 Op 1 . + CDS 301453 - 302730 791 ## HMPREF0675_3583 hypothetical protein 334 159 Op 2 . + CDS 302766 - 303335 488 ## HMPREF0675_3584 hypothetical protein 335 159 Op 3 . + CDS 303355 - 303951 414 ## PPA0534 hypothetical protein 336 160 Op 1 22/0.000 + CDS 304130 - 304747 1031 ## PROTEIN SUPPORTED gi|213960306|ref|ZP_03388588.1| ribosomal protein L25, Ctc-form 337 160 Op 2 . + CDS 304762 - 305346 305 ## COG0193 Peptidyl-tRNA hydrolase - Term 305101 - 305154 5.2 338 161 Tu 1 . - CDS 305386 - 305628 229 ## COG1052 Lactate dehydrogenase and related dehydrogenases 339 162 Tu 1 . + CDS 305545 - 305853 105 ## HMPREF0675_3589 hypothetical protein 340 163 Tu 1 . + CDS 306095 - 306283 73 ## gi|313802681|gb|EFS43903.1| hypothetical protein HMPREF9576_01138 + Term 306406 - 306434 1.4 - Term 306328 - 306372 11.2 341 164 Tu 1 . - CDS 306383 - 307438 739 ## COG1064 Zn-dependent alcohol dehydrogenases 342 165 Tu 1 . - CDS 307813 - 308952 762 ## HMPREF0675_3592 hypothetical protein 343 166 Op 1 . + CDS 309016 - 312642 2489 ## COG1197 Transcription-repair coupling factor (superfamily II helicase) 344 166 Op 2 . + CDS 312710 - 313219 411 ## HMPREF0675_3594 hypothetical protein 345 166 Op 3 . + CDS 313228 - 313866 478 ## COG1694 Predicted pyrophosphatase 346 167 Op 1 . + CDS 313982 - 314512 289 ## HMPREF0675_3596 hypothetical protein 347 167 Op 2 . + CDS 314600 - 315880 1592 ## COG0148 Enolase 348 168 Op 1 . + CDS 316180 - 316620 260 ## HMPREF0675_3598 septum formation initiator 349 168 Op 2 4/0.069 + CDS 316628 - 317170 385 ## COG1507 Uncharacterized conserved protein 350 168 Op 3 . + CDS 317167 - 318099 670 ## COG0248 Exopolyphosphatase + Term 318253 - 318298 1.2 + TRNA 318110 - 318183 52.4 # Leu TAA 0 0 + Prom 318110 - 318169 76.8 351 169 Tu 1 . + CDS 318331 - 319164 621 ## COG4760 Predicted membrane protein + Term 319178 - 319218 12.9 352 170 Op 1 . - CDS 319236 - 319931 373 ## HMPREF0675_3603 hydrolase, NUDIX family 353 170 Op 2 . - CDS 320008 - 320973 545 ## PPA0551 hypothetical protein Predicted protein(s) >gi|302034490|gb|GL383261.1| GENE 1 58 - 759 475 233 aa, chain - ## HITS:1 COG:ML2302 KEGG:ns NR:ns ## COG: ML2302 COG0664 # Protein_GI_number: 15828234 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Mycobacterium leprae # 35 232 32 223 224 149 47.0 4e-36 MANVVATAATQPFFATLGAASAARIMAMCEASVCPRNTVIFKAGDSADNLYLVVEGKVKL TRSTTADDLTPRDSLLWLMGPSDMFGELSLVDGGTRSTTATTVTRCSLLKTPGAQMRELV KGRHDVALAMLGRLSERLRRADDNTAHFVSGDVPSRLAYTLLDLARRFGTANPSTGHIVV RHDLTQHELAQAVGSSRETVNKALTDFAARGWIAARPKVVTIMEPEKLASRAN >gi|302034490|gb|GL383261.1| GENE 2 677 - 1612 511 311 aa, chain + ## HITS:1 COG:Cgl0293 KEGG:ns NR:ns ## COG: Cgl0293 COG0177 # Protein_GI_number: 19551543 # Func_class: L Replication, recombination and repair # Function: Predicted EndoIII-related endonuclease # Organism: Corynebacterium glutamicum # 96 308 38 251 260 238 56.0 1e-62 MAMIRAAEAAPRVAKNGWVAAVATTFAIRTSPLMSTCIVRPFVAGRVPTLWQLSHSVLTP GLDSPPMLSSMAASPSASRPQREDCRACANEVRALLAKAYPDAHCELNYAGPYQLLVATV LSAQTTDRRVNTVTPTLFNRWPGPQALADADIGEVETVVAPLGCGPTRAARLVSMGAKLV DNFDGAIPDDLDSLVTLPGVGRKTANVVLGNAFGIPGITPDTHVMRVSRRLGWTDATTPA KVETDLAELFDPSEWVMLCHRLIWHGRRRCHSRRPACGVCPVAEWCPSFGEGPTDPEEAA TLVREPRRSGG >gi|302034490|gb|GL383261.1| GENE 3 1486 - 1716 64 76 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRAPRYSGILALMSHARISPAASKHQGGHHRAENLHPPDRRGSRTNVAASSGSVGPSPKD GHHSATGHTPQAGRRE >gi|302034490|gb|GL383261.1| GENE 4 1844 - 2260 276 138 aa, chain + ## HITS:1 COG:DR0189 KEGG:ns NR:ns ## COG: DR0189 COG0526 # Protein_GI_number: 15805225 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Deinococcus radiodurans # 20 119 67 165 185 71 42.0 5e-13 MPDHGLQCLGEGPTVSMSRATWRGVTVVTIWASWCRPCRSEAPLIANAYRRYHDRVHFLG IDYAESDASEAISFAGDAGLTFPHLQDPDSTIQGAWQISGVPVTFIVRDGTIVTRHSGQW RSQRELDSAIDKVIKRTP >gi|302034490|gb|GL383261.1| GENE 5 2257 - 2913 381 218 aa, chain + ## HITS:1 COG:ML2299 KEGG:ns NR:ns ## COG: ML2299 COG0494 # Protein_GI_number: 15828231 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Mycobacterium leprae # 27 201 67 255 266 119 42.0 3e-27 MSHLSALIASLGRDDPDFSVGRRPGGGRSSAVLALISEEGNDIVLTRRPLSLRHHAGQVA LPGGRAENTDETIVDTALREAHEEVGLDRRLVTVRGVLPTAHVAASGSDVTTVIATWSGA GTVGVVDPAEVAMVQRVRLADLANPAARATTRHPSGYRGPAFVLPDIFVWGFTAHVLDAL LDRGGWSRPWDRERMVEIPEGYLGARRLPEEMTPNDIP >gi|302034490|gb|GL383261.1| GENE 6 2994 - 3530 653 178 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3273 NR:ns ## KEGG: HMPREF0675_3273 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 178 1 178 178 306 100.0 2e-82 MADKLPVGDTIDNLKTDGQKLVQDSKALVTAEIKPAAKHAGIGVGMFGGAGYFGIVGALL LWLCGAFAFSLMWQHIGNWDILLSLVVGFATMAVVLFILAGILALAGKGQISQVKAPTGI VDEAKSTLTAVKSAVARGKYNATARSSIDASEIPSPAAPVAADGTSAPRRASGATERD >gi|302034490|gb|GL383261.1| GENE 7 3627 - 4889 811 420 aa, chain - ## HITS:1 COG:STM0039 KEGG:ns NR:ns ## COG: STM0039 COG3004 # Protein_GI_number: 16763429 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/H+ antiporter # Organism: Salmonella typhimurium LT2 # 25 396 3 383 388 227 39.0 4e-59 MTDSRKNKRPRKSILRPVTGPNALHLSDIFRNETTGGMLMLAATVAALLWANLGHHSYHF FRELALGPLTIEQWAADGLLTVFFFIAGLELKREFVEGSLSRPADALVPIVAAVCGMVFP AGIYTLFNVLASDGHPAGWAIPMATDIAFALAVLAIVGAGLPQAVRAFLLTLAIADDLGS IIVIAVFFSTGLDIWWLAGAIACIGLWGVMQHFHVDNGWWYVPIFIVGWWCMLRSGVHAT IAGVAFGLLTRTEEDVLDDPVDRWQHKVEPWSAGVVVPFFALMSAGVHVSGKTFLALWTH PISLGIVCGLILGKVIGITLGSCLTARFTSAELGRGVVWRDIIAVAVLAGIGFTVSMLMT DLSFPKNHEFADEAKASVLMASFLAAILGGAMLHHRGKSHAMRQTKHSHEVPVAAGTCND >gi|302034490|gb|GL383261.1| GENE 8 5057 - 5815 526 252 aa, chain - ## HITS:1 COG:Rv3342 KEGG:ns NR:ns ## COG: Rv3342 COG0500 # Protein_GI_number: 15610478 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Mycobacterium tuberculosis H37Rv # 41 230 56 240 243 80 32.0 4e-15 MAVSSAPHLPSGSFEWLTAGRVDPGSRVVVLCPTVAHCRAVASHGADVLAVHRDPDTAEK LNRIPGVMAVCGSPESLPLNSSSFDAVLVHQGFHELAPGLALPEIARVLRPGSVLGVSWL VRDDTVPWVKRLAALLRTVDENAMSGDYGTESVHELISSKYFPEDEHTTKRLWVPVNRDS LVAMAAARPAVRALDSDARSNVLTKVAALADDSAGTSGLRLPYQLECWRAWVDHDELTTP IRPHDDGLTITL >gi|302034490|gb|GL383261.1| GENE 9 6166 - 7002 260 278 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3275 NR:ns ## KEGG: HMPREF0675_3275 # Name: not_defined # Def: CpaE-like protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 278 1 278 278 457 100.0 1e-127 MAGSVMAWGLSPRSGTYVVGFDAEEAARWSAGLSASVIVVPRANQVLTEILHDELATTSR ATVVQVNSSGGGTGVSTLASGLAWAAARSGIKVGLVELNPSAGGIDLLLGIERKDGWRWP ELASARGVTTDLGSHVPSLDGVEVVSAGRVGVHVPPAARRAVVDSLAGDHDLVVVDPGGL DTPEVTVNVKVGVVAADLRSVMTARGQNLPDLLVARRGPGRSMPDEDIESVLGVRPDMTI KDDRRLARGQGDGEAPWVVASRRWRSGCAELVDQVMGS >gi|302034490|gb|GL383261.1| GENE 10 7080 - 8165 513 361 aa, chain + ## HITS:1 COG:Cgl0301 KEGG:ns NR:ns ## COG: Cgl0301 COG4962 # Protein_GI_number: 19551551 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Flp pilus assembly protein, ATPase CpaF # Organism: Corynebacterium glutamicum # 2 345 26 369 377 272 49.0 6e-73 MDVAHAILDCGRVASDKTVLAVVEELRRTSTGAGRLDPLLAMDGVTDVLVNGPNQVFIDR GQGLELTDVTFSGPEEVRALAVRLAAAVGRRLDDGNPWVDARLPDGIRVHAVLDVLARPG TCLSLRVPSRRCLSLDDWVTGGSMAPGCRRMIDTILSRKLAFLVTGGTGTGKTTLLSAML TSLPSDQRLVIVEDSREIWIDHPHWVSMEARAANSEGKGSVTLTDLVRQCLRMRPDRIVL GEVRGAELRDLLMALNTGHEGGCGTVHANGVAEVPARLEALAALGGLSREAASAQITAAL HTVIHVERGERGRRVAEIGVFVDVEGRAVVLPAVRWDADGVMTLGDGAGRLSQLLGMEVA R >gi|302034490|gb|GL383261.1| GENE 11 8162 - 8932 366 256 aa, chain + ## HITS:1 COG:MT3758 KEGG:ns NR:ns ## COG: MT3758 COG4965 # Protein_GI_number: 15843271 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Flp pilus assembly protein TadB # Organism: Mycobacterium tuberculosis CDC1551 # 82 249 90 263 266 64 31.0 2e-10 MTVIGASLLMGLAVWIAMPSATRKQEGRHLPAWSGIPVGFVVAWLLFGASGVVWAVMTVV VGETVLVVVRRQRRRAQILKGGREVARATRALAGRVSVGEIPSVALEHVADDVEVLAQAR RAQAVGGSVSDALIATSRQPGMAGLVPLAHAWHLAATTGAPLAPAAKSVAEGTARRARLE ATLDSELAAARASGRIMGLLPLVGLLMGHVVGAHPTVFLTTTWLGRACLLGSTLLACVGV LWSESLADRVAKEALP >gi|302034490|gb|GL383261.1| GENE 12 8929 - 9216 164 95 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3279 NR:ns ## KEGG: HMPREF0675_3279 # Name: not_defined # Def: type II secretion system F domain protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 95 1 95 249 142 100.0 5e-33 MSDIDVTGTLLPAMIMAAIAAWLVVPATARTRTQARKPPPAWLAPRPGAPASHIRVLAGL VAACAVLIGVPWPFPAAAGLSVLVGTVMWWGSGRL >gi|302034490|gb|GL383261.1| GENE 13 9235 - 9678 328 147 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3279 NR:ns ## KEGG: HMPREF0675_3279 # Name: not_defined # Def: type II secretion system F domain protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 147 103 249 249 244 100.0 7e-64 MEQHRAAQLPEALLMLSSAMEAGLPLRSAVTTVAESLEGPCAEDLRRLASSLAAGVPDSR AWNDLASVEVWRDPAQDVSRAVDSGEGISELLSAHAAQLQVAAAEKTEKKARKAGVDAIG PLVCCHLPAFLLVGVVPIIAGMVLGAL >gi|302034490|gb|GL383261.1| GENE 14 9887 - 10174 204 95 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3280 NR:ns ## KEGG: HMPREF0675_3280 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 93 1 93 95 142 100.0 5e-33 MSENTDPTTEPVISARSLDLVGATDVVEPRHRGRYRAARNKIIDRGMATAEYAVGMLAAV ALALVLLKVVTHQEVFTKLLKLVVSIIGKAGGMPS >gi|302034490|gb|GL383261.1| GENE 15 10346 - 10663 159 105 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3281 NR:ns ## KEGG: HMPREF0675_3281 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 105 32 136 136 151 99.0 7e-36 MVTVEMAVSLIAATLVVATSCWVVGLVVVEDACRTTAAQVARQVACGDTASARQAESNAP TGAKVSTTTSGGWVNVTVQVDRSLGRIGPVHLRGQARSPMEPGQT >gi|302034490|gb|GL383261.1| GENE 16 10837 - 11067 90 76 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3282 NR:ns ## KEGG: HMPREF0675_3282 # Name: not_defined # Def: TadE-like protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 76 60 135 135 129 97.0 5e-29 MAALAAGGAQAIGEPGCPVAERTVKANGAELVSCVVHNTENGSSVTVEVGVQLHRGWELP GMPTRVVKSSRAGPME >gi|302034490|gb|GL383261.1| GENE 17 11162 - 11419 120 85 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3283 NR:ns ## KEGG: HMPREF0675_3283 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 85 1 85 85 162 100.0 3e-39 MLCRDLDMELGRITVIPDAHRTGKLYLYRELRMVPGMAPSEVISAQAAEDDLGQLSVTSL SVNRCESPTWGAELPRVVLGMLQGR >gi|302034490|gb|GL383261.1| GENE 18 11480 - 13501 921 673 aa, chain - ## HITS:1 COG:Cgl0307 KEGG:ns NR:ns ## COG: Cgl0307 COG1205 # Protein_GI_number: 19551557 # Func_class: R General function prediction only # Function: Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster # Organism: Corynebacterium glutamicum # 32 669 105 778 785 492 41.0 1e-138 MAATASATPVVPESPTPGLPASLRDSLHRNSALYLAPTKALAHDQERVCREVGPRDWLVS TLDGDSDEAERRFAREQARYVLTNPDMLHHTVLPSHARWAGLLGSLRYVVIDEAHRYRGV FGAHVAQVIRRLRRLCRMHGADPVFLLSSATSTNAAEAGTRLLGVEKVEVVDEDCSPHPG RDVVLWQPAESISTDATGLVADLADAGLQTICFVASRSLAEVISAHAQDRVTSGARVTAY RAGYLPEDRRRIEARLQDGSVRAVVATNALELGVDISGMDAVVIAGYPGRLSALWQQAGR AGRSGRDALVVLMARENPLDQYLFEHPELLFSSSVESTVLHPDNPYVLGPHVAAAAQEAY LSPADEEFYGSAFAGICKTLTGQNVLRRRGNRLFWTRPERAVDAIDLRSAAGKGIDIIDV STGRVIGGVDEAAADRTVHPGAVYLHQGDQWLVDEYNPVEHHALVHQDLPGYWTQPQSAS TVRILREERRRACGPGYVACGQVELTEQVVGYLRRDEITNDVWDSVALEMPTHTMITQAC WWVIPDKVVDDLKFDAVHLAGAAHGAEHTAIGLLPMYSPCDRWDVGGVSTVMLPDTGACT IVVHDGQAGGAGFAEAGFEKAEEWWHATIMRLAQCGCESGCPACVVSPKCGNANQMLDKA AAAALTAAMDPLA >gi|302034490|gb|GL383261.1| GENE 19 13768 - 15285 941 505 aa, chain + ## HITS:1 COG:Cgl1871 KEGG:ns NR:ns ## COG: Cgl1871 COG2890 # Protein_GI_number: 19553121 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methylase of polypeptide chain release factors # Organism: Corynebacterium glutamicum # 23 423 13 416 509 200 33.0 6e-51 MERSRAKIATMGRHLTVDEIEQLRHIFTDIGYVTDPVMAAIGDSGQLGLTRNSTTPALRA LAGRTDALAGAIRLWLLQQPVPVEQLAPLPLQALTEAGIVSIAGSTARALVDVRPYGSPD DGASGWTVSDLTPGLDKTITKIRPDYVLGVSPASVSLTQMAVPTHVGSALDMGCGCGVQS LHLSRHADHVVATDVNPRALEMAQLTCRLSHADVDIRDGSLYDPCGHDTFDLIVTNPPYV MAPPSRDGQRLIYREGGFCGDGLVEAVVRGAPARLNDGGMLQVLANWAHIGDQPWSERLA TWVEETGCDLWVVEREHLDVCEYIETWLTDAGLDGSAQWRSRYDEWLSYFDNLDVTGVSL GWITLTKAGRDDPDLCFEEWPWQVAQPIGGTMARRAQAVIWAHLSDEDLLARRWRIAPNV DSETTGRPGATDPEHVVLRQRRGLCRAVEMTTASGGVLGACDGELTLAQITDAVSAILEV DHDALLIEVLPLVRECLRYGILETA >gi|302034490|gb|GL383261.1| GENE 20 15378 - 15665 322 95 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3286 NR:ns ## KEGG: HMPREF0675_3286 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 95 1 95 95 175 100.0 5e-43 MTDHQEIPLTETHHCSCGESDTELPELDVRTIPHAIRHGAVIGAFAQLQPGASMVLIAPH NPLPLLSQLEQIGSVGVEYLVEGPDEWHLKLTKQA >gi|302034490|gb|GL383261.1| GENE 21 15888 - 18677 2705 929 aa, chain + ## HITS:1 COG:ML0200_1 KEGG:ns NR:ns ## COG: ML0200_1 COG0550 # Protein_GI_number: 15827005 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Mycobacterium leprae # 5 589 16 608 608 696 62.0 0 MSPTKSLVIVESPHKATMIAGYLGPKYTVRASQGHVRDLPTSASEVPAKYKGEPWARTGV NVDNEFTPVYVVSPEKRSTIRELKSLLKDSDELLLATDGDREGEAIAWHLLDELKPKVPV RRMVFNEITEKAINEAVAHTRKLDTDLVDAQETRRILDRLYGYEVSPVLWKKVLPRLSAG RVQSVATRLVVDRERERMAFTSANYWDMEATLTADLDEFQARLVSLDDTKIATGRDFDSH GNLISSVRRLDEVAATAIAKALEKAPFTVTKVESKPYTRRPYAPFRTTTLQQEAGRKLGF TSQRTMSVAQNLYEGGYITYMRTDSVALSQEAIHAARNQAAELYGSDHIPDKPRIYASKV KNAQEAHEAIRPAGEHFRTPAETGLTGDEFRLYELVWMRTLASQMADAKGETLSVTIDAT PVSPVNLPDGDVTTATFTASGRTITFHGFLRAYVESVDEGASDDAQKRLPQLSKGQDLDP REVTAKGHDTRPPARYTEPSLVAKLEELEIGRPSTYASIIRTITSRDYVFKKGSALVPTW LAFAVTRLLEEHFSNLVDYQFTADMEETLDQIARGNADRVAVLSAFYFGQTKTGDGDVPT PTEGHEGLHQLVTELGDIDARTICTFPLDDSDVVVRVGRYGTYVEDPEGNRANVDDALPP DELTVEAAKELLVSPNGQDRELGLDPHSHRPIVARNGRFGPYVTEVLDDDEATEIVETTT KDGKKRRTKRKVKPRTASFFRSMSLETVTLDEALKLLSLPRVVGTAADGTEITAQNGRYG PYLKKGTDSRSLGSEDEIFSITLEQAEAIYAQPKQRGRAAAKPPLRELGEDPASGRPIVV KDGRFGPYVTDGQTNATLRKDDSVEDITPERAQELLAEKRAKGPAKKSPTKKKTTRKTTT RTTTTKKTTKATSKSVKVTKANAKTSSGS >gi|302034490|gb|GL383261.1| GENE 22 18679 - 20166 745 495 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3288 NR:ns ## KEGG: HMPREF0675_3288 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 495 1 495 495 921 100.0 0 MTTGCRSGSTEPLYFELAWTAARPVPADLRTTVAAGGARRTIECKVTLLDSPDHRLLRSG IVVAHRVVDGLGEWYMDAPEWSPWLPVARSVALDAAGELPQDFTCLVRPFLRGATLCPVA ALSWERNETILEALDCTKLALIRDDRIAVVQSGVTTSRVRELTITPQRGLAEGQREWLTN RILALDGVPVSRHPSVLRRLGPGAGALTDYPRPHLHHGAGLQTWVSAQLAGQLRDVIEAD LAVRCQGMDLGPTETTRTEPRVLPESPDRTDLVGMGYDPVTMSTPSIHDGNHGSIRPLQK AIRALSETLDAMSGLLDQAWVERAQNLCLRVMGLDPGHISIHNLSREYYQLLEEITAAAR SPRLTVDPDQPARPTMKRVLRKSVADAVAKCDDVEDVQGWSTAEVAVRHAAAVAGILDTG RAGKVAKRLRPVVKEIAQTKRSVTEAVDVSKMSPQEAFEAGREVERASASLFAARQSFRD DWQQHRRKILKAIHD >gi|302034490|gb|GL383261.1| GENE 23 20159 - 20803 406 214 aa, chain + ## HITS:1 COG:DR0111 KEGG:ns NR:ns ## COG: DR0111 COG0125 # Protein_GI_number: 15805151 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate kinase # Organism: Deinococcus radiodurans # 13 209 4 202 206 159 49.0 5e-39 MTDQTVTGRDLGGVFVVFEGGDGAGKTTQARLLDQWLTTEGIPHLMTREPGDSWLGQRIR ELVLSPGSGPISSRAEALLYNADKAQHVDEVVIPALREGKVVVCDRYVDSTIAYQGAGRA LDPGEVGQLACWATTGLVPDVTVLLDVDPCEGAGKIAAKDRLEAAGDEFHLRVRQHFLDL AAAHPQRYLVLNARKSRKEISEAIRQRVTGLLNR >gi|302034490|gb|GL383261.1| GENE 24 20859 - 22058 527 399 aa, chain + ## HITS:1 COG:MT3747 KEGG:ns NR:ns ## COG: MT3747 COG0470 # Protein_GI_number: 15843256 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication # Organism: Mycobacterium tuberculosis CDC1551 # 1 388 3 396 404 239 44.0 5e-63 MLTGVWADLVGQEKAVGVLRRAAESQPGRSSHAMSHAWLITGPPGSGRSNAAKAFAAALQ CVDHGCGQCNACRTTLSGAHPDVTLVRTEALSIGVDEVRELVRRAAMNPVHGCHQVVVVE DADRITERGADALLKAIEEPAPKTVWLLCAPTPEDVIVTIRSRCRRLHLATPRDEAVADL LTRRDGIAPEVAAEAARAGQGHIGRARRLAWDEEARARRNAIGELPTRLRSLGDCLQAAE DLVNQASEEAAAATAEVNAAERAELKKALGFGSSGARPRNAQAALRDLEKQQSARLKRLQ RDALDRVLTELTAYHRDVLAIQTGAVRPEEENALRGARLVNAGWSASLHRIADSQSPEHT VATIDAILAARKSLEHGVTPLLVMETLLIAMTGVDRARW >gi|302034490|gb|GL383261.1| GENE 25 22190 - 22996 749 268 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3291 NR:ns ## KEGG: HMPREF0675_3291 # Name: not_defined # Def: DoxX protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 268 1 268 268 447 100.0 1e-124 MSKAIKRTAADSTDAETTRVIRTGASRVDADVNPTEVIKPSDSADSERTSVIDDNVFRPA SETTRVVDDREFEEERRRRELAEQRARERADRQAIEAERQRRAAHAEPEPEQVAEPAPKR TTDKVMASLGLFLFRLIVGGILGVHGFQHLAQRDLTLRAVQALPLPSGYAQSGVWVLGIC ECIAAVCIILGLFTRVAGAGIIAIMVLSLTFIFWGSFAIFKTMGFKGELELLLAACGVLL LFLGAGGWSIDAAYRRSRAAAKAEEVGD >gi|302034490|gb|GL383261.1| GENE 26 23071 - 23733 142 220 aa, chain + ## HITS:1 COG:SA0443 KEGG:ns NR:ns ## COG: SA0443 COG1774 # Protein_GI_number: 15926162 # Func_class: S Function unknown # Function: Uncharacterized homolog of PSP1 # Organism: Staphylococcus aureus N315 # 49 195 22 166 211 115 37.0 5e-26 MGSWLLYPTPEGPLVCRCVWGPEEVDLDGKLPTCPGKAGDAAVAAAARDRRTRAEILQTV RRTIEDVGVDMEVLAIDLVESGDDRAIAVYFRAPHRVEFATIVGPLARRLRARIDLRQLR GRDTARVVGGVGVCGRSLCCSTFLPEPSSVPNRLVSEQGMASNPLAVTGACGKLMCCLRY ESPYYADFEAALGEVRVPDAPRCPLMSTCSRRRDQERKDA >gi|302034490|gb|GL383261.1| GENE 27 23750 - 25432 835 560 aa, chain + ## HITS:1 COG:MT2281 KEGG:ns NR:ns ## COG: MT2281 COG0596 # Protein_GI_number: 15841715 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Mycobacterium tuberculosis CDC1551 # 120 560 54 518 520 200 34.0 6e-51 MTPRVSRRRMFVSALMASSLFAVTACTSAGSRPPQSASVSRQSASHKPSASPSVTASVVP AQDKVDTNPPVASFDPKAHALMEGPQSPDRQAMHPARDNKPFSKAPAGKGTNRYLSRKIS WHDCGTFQCADIPVPLDWDNPDGPAITLALKRKPAEGAAKATLFINPGGPGGSGQDMVSS FQSSAFPDHDVIGWDPRGTGASTHVNCGPAKTMDGLFSLDASPDDEAEWNELIRGTRDFA RSCRAYSGQLLDHVSTIDTARDLDYLRYLVGNKKLDYLGVSYGTFLGATYAELYPGRVGH MVLDSTVNITNHDTVSQAVGFDRAFGDFAQWCANRGNRCALGTSEAEVRKATLNFLDRLD AHPMKVAGRELTQSLAATGIALFLYSGKQAYSYLIAALVGAMKDGNGGYLLTASDYLNGR GKDGQWETIASAFPAISCLDQADFGLKHARQEWPQEVAKAPTLGKALGVAPICEVWTARP APQLYLTARGAAPILVLGATGDPATPYEQATWMAGQLKSGVLLTWRGSGHSAWELGNQCV KKAVEGYVNDGKMPKDNTVC >gi|302034490|gb|GL383261.1| GENE 28 25521 - 25853 278 110 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3294 NR:ns ## KEGG: HMPREF0675_3294 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 110 1 110 110 187 99.0 9e-47 MTLGQRHVTGIVVRAVGLALLAGILLALEWAWRTHAWNDLKAVDGRCVLVGARVDDGRVP TVGCHENGARYVKDVVKPSSQCPEGLTRVSVRHELSHDAGYVGALCVRNP >gi|302034490|gb|GL383261.1| GENE 29 25887 - 27536 1388 549 aa, chain - ## HITS:1 COG:Cgl0137 KEGG:ns NR:ns ## COG: Cgl0137 COG4805 # Protein_GI_number: 19551387 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 7 549 19 553 553 371 42.0 1e-102 MGSEVDEVADHYWAALVQSSPTLATALGLDLNQDEYDDLSPAGLDAQYRLAMDTLDRLDQ AMPADDTDRITAAAMRSSLGLEAESHDRGYDLLSLNGIASGVHEIREVYDAMPTETPDQV STVARRLHATGPALDGWLATQRASIDAGIPPAIRQVSLLVEQITAWTSDGGFFDDYLKRT ASRDLPDAVTTALAEGIDAAKRNFRRTAEALSSEIAPLATETDAVGIDRYRLASRQFVGT TVDLTETYEWGKQELARIEQMQRETAERIRPGASIKEAMAVLDADPAYQITGTAALKVWI QERADEAISSLDGTHFEVPEQARHIEGMIASTHDGGVYYTPPSDDSSRPGRMWWSVPDGV NTFTTWRELTTVYHEGAPGHHLQTSSAIAAREELNSWRRNYWTSGYGEGWALYAEWLMAD LGYMDDPGHFMGLLDGQSMRAARVVLDIGLHCQFEAPEEMGGGEWNWDKAWAFFNNHVSM DEGSARYEVNRYFGWPGQAPSYKLGERTWLELREAAKAKDPNFDLKEFHTTALRMGALPL DVLRRAMLS >gi|302034490|gb|GL383261.1| GENE 30 27974 - 29323 1026 449 aa, chain + ## HITS:1 COG:slr0782 KEGG:ns NR:ns ## COG: slr0782 COG1231 # Protein_GI_number: 16331344 # Func_class: E Amino acid transport and metabolism # Function: Monoamine oxidase # Organism: Synechocystis # 3 449 24 471 471 205 30.0 1e-52 MYDSIIIGAGLAGLTAAEELASAGHSVVVLEARARVGGRLENAELSNGQVVELGGQWVGE GHEELRSLLSSQGLELVDSTDGDVVVKARGRVSHVTSLSEPSAHSLSPFELADLGQGLLR FRRLADRVANNKGWAAANATWLNQSLSQWTASNVRTEAGRGYITNLFRQAFGVSANDTPL FNGLAKANAGVDLESLVAVNGGLKQQRVKGGVAQVTRNLAEPLGDDLKLSSPVRSVHSDD DGVTVTTTDGTQYQGRSVIVTVPPRLLKDMTFEPALPAERLEMADKVPAGNVIKAYLVYD SPWWRTSGASGQMGADEGAVRVIFDTSDDETGKGILMGFFEGAEASGYGKLSIGLRQRAF EEVVESAFGKAPSSPIEYLDRDWLAEPYTGGCHGAHFAPSLWTTTGPILAEPLGRVLFAG AEYASSFNGYMEGALRAAARAAQEVLDLL >gi|302034490|gb|GL383261.1| GENE 31 29625 - 30668 349 347 aa, chain + ## HITS:1 COG:no KEGG:PPA0251 NR:ns ## KEGG: PPA0251 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 347 1 342 342 446 94.0 1e-123 MFCARCGTQVGAHDAVCPQCGLNLRLPGAVRMTDPGSCDETRVQSPVSEGATPTREIPRV QTPSEPVEWQDSMPTQQWQVQDSTPTQQWTTNSQSGPQQPSQGQYRDLGASQMPDDWFRD PEAERTRVMAAVPENPVFTPPPPPSTPAMAYPPPPSGDSSRHRKVLIGLVVGLLVLVVLG AVLLFAGGLKGRSGSEPAVVATPSASSQPKQSASEDPQATSIDTTPSFLMSSPASPSPVP SSPGSSSPALSTPTPLSPQSPTLSARQVADKLPDGDTLCSSSVGAVGTTSCPFALEVANA IPAGAQGDYEVQAYSPVTGKTYTMKCETQESYTTCTGGIAAKVHILR >gi|302034490|gb|GL383261.1| GENE 32 30686 - 31171 401 161 aa, chain - ## HITS:1 COG:MT1313 KEGG:ns NR:ns ## COG: MT1313 COG2062 # Protein_GI_number: 15840723 # Func_class: T Signal transduction mechanisms # Function: Phosphohistidine phosphatase SixA # Organism: Mycobacterium tuberculosis CDC1551 # 4 145 8 155 168 74 34.0 6e-14 MHTLFLMRHAQPASHAPGGDRERPLTDVGRRQAREVGTRLGLRNVGHALVSDALRTRQTW DCLQLDCPVEFMRALYYCGTDTVRQRIGEIDDDVDNLLIIAHAPTIPGLAAQLAAMSGAE NEVGCWYPPATLTEVEVDGTWADLKDEYFDKVRLVGVQRPM >gi|302034490|gb|GL383261.1| GENE 33 31219 - 32208 448 329 aa, chain + ## HITS:1 COG:TM0077 KEGG:ns NR:ns ## COG: TM0077 COG3458 # Protein_GI_number: 15642852 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acetyl esterase (deacetylase) # Organism: Thermotoga maritima # 1 328 1 322 325 238 39.0 1e-62 MPLTDLGIDEARTYRPNVPEPDGFDSFWAETLDEYSGVPQDLTAVPFDNRQALIDTWDLS WAGYHNSRVSGWLHAPAAVNGPLPLVIEYLGYSSSRGVPIGSVFAAAGYAHIVVDPRGQG WGHPTLTENCPDVHDGSGAPGFMTQSLSDPHGHYYRRLFTDAFRCLQAAREMELVDPTRI AVLGHSQGGGQAIAVCALAAMRGIKLAGAFVDVPFLCHIRRSCDIATDGPYLEVVRYLAA HPSLCGRAFQTLGYFDGLHFARRARTSTWFSVAMMDQAVPPSSVWAAYNAWGDGMVADKH IAVYPFAGHAAGEDVQRWNQLGVLAQLFS >gi|302034490|gb|GL383261.1| GENE 34 32224 - 33237 682 337 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3302 NR:ns ## KEGG: HMPREF0675_3302 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 337 1 337 337 635 100.0 0 MSESLVLLAPAANHVYAGQAGRLCAAELSLTCPNATSVAPVTVAGVEYLSIHSEDPLPPA DLAAVARSSAALACFEYRGDLLAPLELPQVDVVDEDLVTIPKYRGKTNEQFTRLLLNLTL ASLEGRCATRRDEGQRLAILDPLAGRGTTLECAWRAGHNGFGVEQDAKAVEALAAHVTTW LRRKHLKHSCGTHPVRRDGRSLGKRFDAEVRLPKTEPLAMGVFTGDAADSAVLWGRKTFD AVVTDAPYGVVHGSHSGASRRRSPTDLLREAIPVWAGQLRHGGALGMSWNTLGLSREHLV TILSAAGLTPLDDDLWHQFSHRVDSSIHRDLIVAVKP >gi|302034490|gb|GL383261.1| GENE 35 33348 - 33902 511 184 aa, chain - ## HITS:1 COG:MT3730 KEGG:ns NR:ns ## COG: MT3730 COG0221 # Protein_GI_number: 15843240 # Func_class: C Energy production and conversion # Function: Inorganic pyrophosphatase # Organism: Mycobacterium tuberculosis CDC1551 # 17 178 1 162 162 205 62.0 4e-53 MTDDFTNPFQGEQPESLHFDVTIEIPRGNKNKYEMDHETGRIRLDRTLFTSTQYPYDYGY IEGTLGEDGDPLDALVLLTEPTFPGCLIECRALAMFQMQDEMGGDDKVLCVPADDPRRAG LIDLDDVGSMTLMEIEHFFTVYKDLEPGKSVEGATWTDRDEAEAEIKASFERAKGTSYEN LHTA >gi|302034490|gb|GL383261.1| GENE 36 34029 - 35402 907 457 aa, chain + ## HITS:1 COG:ML0211 KEGG:ns NR:ns ## COG: ML0211 COG2027 # Protein_GI_number: 15827014 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) # Organism: Mycobacterium leprae # 7 455 11 459 461 151 34.0 2e-36 MPGWVPVTVGIAVVVIVVVAVIVSSLRSGSPARWTGGGILPHRHDNTAQAVQPGRGVVAA VAPTTPSAKPVAATIANRVKSAGAAPGVLGADIMDAAIGETLYQSGQNSLLTPASNLKVL TAIALLDCTDAGHRYTTKVVANGSALTLVGGGDPYLRSKSSAQHPEYPSMEELAKRTAAA LKKAGTTKVTVNFDDTLFTGPDWNGAWPVDNYSDEVTPITSLWVDEGMINNSPWNRSKTP AVLATNAFIGSLRSAGITVNGSVSRHKADRSAREIAAVQSVPVEDLVTRTLDESDNSAAE VLSRQMALASGKPGSFAGGTQALEEHLKNIGAWQDGAVIQDGSGLSQGNRITASMLSRAW RKVLTTPKLQPVANAVPVGRVSGTLHKRFSDPSTAAGRGVVHAKTGSLQGVISMSGWLRD ADGRILVASFIINQTDGSARSWLDVVYGNLAGCGCTR >gi|302034490|gb|GL383261.1| GENE 37 35402 - 36337 641 311 aa, chain + ## HITS:1 COG:ML0213 KEGG:ns NR:ns ## COG: ML0213 COG0037 # Protein_GI_number: 15827015 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control # Organism: Mycobacterium leprae # 25 268 26 267 323 134 42.0 2e-31 MARRELGPAALAVAQAVERMVRGVDRFVVGCSGGPDSLALALASKWASRRCESGVRVVIV DHQLQQGSDEVAERTRDLLVRRGMDACVRRVDVDADDPDGPEAAARTARRAALLDVAGDE PVLLGHTRDDQAEQVLLSLARGSGATSLAGIRPRSGQFWHPLLEVRRAQTVQACREWEVE PWQDPHNGDPRFLRSRVRTELMPVMEEVLGPEVAASLARSATLLAGEDEVVARVARMWAD EHGVKANELPGLRGVEVGLARRVVKEWLPQARMVHVDAVLGLLDGPGGAGVDVPGGRVEM RQGTLYLARRL >gi|302034490|gb|GL383261.1| GENE 38 36365 - 36919 566 184 aa, chain + ## HITS:1 COG:CAC3203 KEGG:ns NR:ns ## COG: CAC3203 COG0634 # Protein_GI_number: 15896450 # Func_class: F Nucleotide transport and metabolism # Function: Hypoxanthine-guanine phosphoribosyltransferase # Organism: Clostridium acetobutylicum # 9 183 4 178 178 176 45.0 3e-44 MRASDIPGDFDHVLYTEEQVASRIREVAAQIDADYAGREILMVGVLNGAVMTMADLCRAM TSHMSMDWMAVSSYGAGTKSSGVVRILKDLTKDIDGRDILIVEDIIDTGLTLSYLVQNLR SRNPNSIEIMAMFRKPEVVTCPLDVKYVGFDIPNEFVVGYGLDYADKYRNLTDVATLAPH VYKS >gi|302034490|gb|GL383261.1| GENE 39 37061 - 39214 1295 717 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 [Rickettsia canadensis str. McKiel] # 12 605 9 593 636 503 48 1e-141 MKNASRIFKGPLIWILLCIGLIIVFLQFAGSGNGYKDIPTSEAVSIINSSKKLDSVTLTD GDQVIKITENENKKYRSYWVGNQSDQLVDRLNDRVKAKTLKSWQGENPGQSIWKALLINF LPFVIILLFFLWAMNAAQGMGGRGGVMGFGKSKAKVGSKDTPKSTFADVAGCQEAIDELQ EIREFLAEPAKFQRVGAKIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMF VGVGASRVRDLFEQAKEAAPAIIFIDEIDAVGRHRGAGMGGGHDEREQTLNQLLVEMDGF DVHGGVILIAATNRPDVLDPALLRPGRFDRQIAVEAPDLDGRLKILKVHAHGKPMADDVD LASIARRTPGMTGADLANVLNEAALLTARANLPVIGNSELDEAIDRVIAGPQKKTRLMNE HERLVTAYHEGGHALVAAAMPGTDPVQKITILPRGRALGYTMVMPDSDKYSQTRSELLDS MAYMMGGRAAEELIFHDPSTGASNDIEKATKVARALVTQYGLSARVGTVQLGSGDTEPFL GMTAGQQRDYSDETAKIIDDEVRELLENAHQEAFDCLDANREVLDELVRQLFARETLSKA EVADIFKPLKRWPERGAFTGSDKRVPSSIPPVKPPQIAGVDENAPEVGAPRRGVIAPPTP EPGGDLPGDNPGEWEPPSDWQPPSVGGGKSPEPPSPTHPGEGPQPPSNGNPWGPPRS >gi|302034490|gb|GL383261.1| GENE 40 39279 - 39854 415 191 aa, chain + ## HITS:1 COG:ML0223 KEGG:ns NR:ns ## COG: ML0223 COG0302 # Protein_GI_number: 15827020 # Func_class: H Coenzyme transport and metabolism # Function: GTP cyclohydrolase I # Organism: Mycobacterium leprae # 6 187 20 202 205 236 67.0 2e-62 MKLSVDRERAAAAIREFLLAVGEDPDREGLRDTPMRVAQAAEELFGGLSQDPGELLATTF DISHDEMVLVRDIELQSMCEHHLLPFIGVAHVGYIPARDGRVTGLSKIARLVEVYARRPQ VQERLTTQVADALVEHLDARGVIVVVEAEHMCMTTRGVRKPGARTVTSAVRGILRNPATR AEAMGLITAGR >gi|302034490|gb|GL383261.1| GENE 41 39918 - 40220 195 100 aa, chain + ## HITS:1 COG:no KEGG:PPA0262 NR:ns ## KEGG: PPA0262 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 4 100 1 97 97 142 98.0 6e-33 MVTVFSAVGGPAAATVGVMTGLAEGTLILAFVTPRRYRRGDEADLPVRSRWWVPVWTVFG RSPGAGFLVFVVFFALALISGGGGIGMGDVKRAVFIGLMG >gi|302034490|gb|GL383261.1| GENE 42 40462 - 41568 771 368 aa, chain + ## HITS:1 COG:RSc2380 KEGG:ns NR:ns ## COG: RSc2380 COG2885 # Protein_GI_number: 17547099 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein and related peptidoglycan-associated (lipo)proteins # Organism: Ralstonia solanacearum # 253 366 93 205 209 77 39.0 6e-14 MWNWKMRAAGFIGGLAVVFGFVALPAHSDESVTVPVPLVDAVAVSHYESAKRQKEKPGSV ILALHAVRRLPYATVVYYSVSVDASVSGPLEDYGYLVGRGGAQAHYSGTLSADGAVIDVG NHKLYRTIGDFQGCKMCASEWWNGAPIWEMAPGHSRLGWFSTPPLPADVSRVDVTVANRI FHDVPVGDGLLGPTIDKEAATGRWNKGMPLGVAWPALDPKDLAGVDVSKFVNALVTTTGD ASDASRERVTKESMKIDLDASVLFDLDSDVVKPAGRQIIDRTAKQLVARKVSGKIEVTGY TDSSGSASHNLDLSRRRAASVAKVLGSQLSKGITLVTAGKGEADPVTSNDSEAGRRLNRR VTITVKEG >gi|302034490|gb|GL383261.1| GENE 43 41568 - 42206 361 212 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3312 NR:ns ## KEGG: HMPREF0675_3312 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 212 1 212 212 341 100.0 1e-92 MKGRPVFVGCVAVLVLTACGGAGVSAGSHPHTAVASSSVSVVGMSAPPSASVSVMGSEQA AAVESAAGKAIRDKVKEDGGPIPKEVANVSFHPNLDDNVDVTAHVVSIKAGPTGTVLTFW LTSNTIDHAMGPVFPEDFPSLVDTVGGVKYGVNYFSKAGDTSKFVVGSEEPEIDAKSVYV MQASYPPLPKSVTKVKIAIGSAKTSPDIPVTR >gi|302034490|gb|GL383261.1| GENE 44 42410 - 42934 318 174 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3313 NR:ns ## KEGG: HMPREF0675_3313 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 16 174 1 159 159 329 99.0 2e-89 MMANNYGVSRRTLLGVGGLMLGVGLVGCSDSEEGWESVTVDRITVSHPTEWVEKPPENEN FTKNFTDGPHGMQIAGHYSDDTEPTLAWSVLEFMIRGTFQGYDPKGYQEITVKGAARAIK CPFDFTYKGKSARGYWLVASGVLPTEGSAIVLLRLPRDDTNLVDKIIASMSFKA >gi|302034490|gb|GL383261.1| GENE 45 42964 - 43416 202 150 aa, chain + ## HITS:1 COG:no KEGG:PPA0267 NR:ns ## KEGG: PPA0267 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 150 1 150 150 233 98.0 2e-60 MRQDTRSAWADPTLTSPAPKRRSRTFNVVLGVLLTIVAAGIADVVVVWSCALVYDTRLGA ALLGCLGALVLSHVWASRRALATVWWSCGLVLLCVVGMAVYAWVRAGLSPVDPVVVETLA PILPVAACTAVGTGYVWRLCARLVADHRSL >gi|302034490|gb|GL383261.1| GENE 46 43606 - 44580 620 324 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3315 NR:ns ## KEGG: HMPREF0675_3315 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 324 1 324 324 545 100.0 1e-153 MRTRDDRGAAAPEYIAILLIAAMFTSAVAVGVKPEWVQQKVCQALAVIFGKGSCAPASQA KPPAQQLPKRCLIHSDENATSIYAEGKITWVTIGGEGGYGYHLVEYSDGKADVELFYNVG ASAGAAAPGWSKGPASLDASITGSAKYTKGETVHYDSVAAARADRDSLNKYARERALAVM HLGSAPDVPNSRLSSTSRTVEVDVKGKATLKVKAKVGGHGSADAGASGSVNGIVQYITKR DSKTGAVTHTVEALGSANGDAHANAGATMGNHGVKTPTVGGHAGLDDDTSVSVTKDNSGK ITELVITKSGAEGADFGVDGDFKI >gi|302034490|gb|GL383261.1| GENE 47 44561 - 45193 408 210 aa, chain + ## HITS:1 COG:no KEGG:PPA0270 NR:ns ## KEGG: PPA0270 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 210 16 225 225 361 100.0 1e-98 MVTSKFELGKPRLVPGPGKPRLVSGPGKPRLVSGPGKPRPVPGPVRWKPEPNKTRDAGNN EGRHGKQGKGSTLSKKPGREEESDGDHKSRETTTIRVAVNDQNRSQVEKWLGDNDVGPSN AVPLLVKARFMNPLDADATNDFAKFLYQSEDTQIDTQTSSETSDLKDDSYDILVAKVGEK DARESSSSTGQMGYLLENGKRVPKISEGCK >gi|302034490|gb|GL383261.1| GENE 48 45249 - 46094 844 281 aa, chain + ## HITS:1 COG:ML0224 KEGG:ns NR:ns ## COG: ML0224 COG0294 # Protein_GI_number: 15827021 # Func_class: H Coenzyme transport and metabolism # Function: Dihydropteroate synthase and related enzymes # Organism: Mycobacterium leprae # 17 280 8 271 284 234 51.0 1e-61 MINVGSATNSHPARTLVMGVVNVTPNSFSDGGMWADPEVAIRHARDLVVEGADIIDVGGE STRPGTERTPEHEELRRVLPVVKALVADGVAVSVDTMRASVAKAVVEAGATIVNDVSGGK AEPEILDVVADAGVDYVLMHWRGQSATMQNLVDYDDVVADVISETSQQVDAAIAAGIDRR RIIVDPGIGFSKTSEHNWQLMNAVDAFQEGFADLRVLWGVSRKRFLGELLAQNGEDRPAL ERDASTMALSTYFALHHAWCVRTHEVRANRDAVETVARLLA >gi|302034490|gb|GL383261.1| GENE 49 46155 - 46517 156 120 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148994682|ref|ZP_01823786.1| 50S ribosomal protein L13 [Streptococcus pneumoniae SP9-BS68] # 5 117 3 117 278 64 33 6e-31 MTYGQITLTGIRAHANHGVLASERELGQPFSVDVSLDVDMDTVSDDLTQAVNYATVAQRV LNILTREPVSLIETLAGKIADTVLAISPRVHSVQVTVHKPHAPVGVALDDVAVTYRKDAE >gi|302034490|gb|GL383261.1| GENE 50 46514 - 47071 424 185 aa, chain + ## HITS:1 COG:SA0474 KEGG:ns NR:ns ## COG: SA0474 COG0801 # Protein_GI_number: 15926193 # Func_class: H Coenzyme transport and metabolism # Function: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase # Organism: Staphylococcus aureus N315 # 1 161 2 157 158 100 37.0 1e-21 MKTVFSLGSNMGDPFAHLRDAVRLIAETPGIHDVVVSPVYVTAPIGGVEQDDFLNLIVVA TSDLPPSVLLERAHVIEAAHGRDHTIPNGPRTLDVDLIRVGDETVTTDELTLPHPRAHKR AFVLVPWRDADPEAELPGYGRIADLVASFDADELADAVKPYSRQIDVAGVTVAGEWDERH DEEDV >gi|302034490|gb|GL383261.1| GENE 51 47068 - 47604 385 178 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3320 NR:ns ## KEGG: HMPREF0675_3320 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 178 1 178 178 336 100.0 2e-91 MTRSLPPEWDDDRRPGGGNPQGNIAPTDWKVIIVAALCGAALGWFALSIYKINDVTVPIL PWSLPVVILVAAIATWGYARAFRTKVVDPQREVEANQGLVSLALGKAIALSGAALVGACI VYVLTFVWHLNIPYPRQRAIVGGVTAITCAAMAWAGWFLENACKVPKGPDDSEKHPKG >gi|302034490|gb|GL383261.1| GENE 52 47687 - 48364 632 225 aa, chain + ## HITS:1 COG:no KEGG:PPA0275 NR:ns ## KEGG: PPA0275 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 225 1 225 225 389 100.0 1e-107 MMMPVSGEHDPKRVEKDTGERRGVLALLIVATIVAAVCGVVPSIWAVRAGVLVALVGAWI SVFMAWRQVDAIRRMHFDTLKELRHAASEQEKRHHAESMEMIDTFSRRVGSISKTLADTR AKLDRAESELSTLRGDKAALQYKVTAGNKKVASLEMRITELETELDALLADGRSGRLTTL RTVTDAGVPTAEEIWERGNDATIADLSRVAFPRLSEGTRETRRQA >gi|302034490|gb|GL383261.1| GENE 53 48441 - 49601 507 386 aa, chain - ## HITS:1 COG:SMa1529 KEGG:ns NR:ns ## COG: SMa1529 COG0649 # Protein_GI_number: 16263284 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase 49 kD subunit 7 # Organism: Sinorhizobium meliloti # 33 386 22 404 404 162 31.0 1e-39 MRKIMFVIGSMPLTHPSQSADGDPGKKYEVTRLDLGHLHPTRSGLVTIATTVDDDVIISS QVNVGTLHRGDEKLFEVRDYRQIPMLASRHDWTAPFIGETGAAHAIEDAMGITIPTRVAW IRTLLAEFSRITSHFTFLSWVGHHCDDAGLENAIATAIENARRIWQRCSGNRIHPMITRI GGLRIHPESEWQPALGEWLDDANALVTQLRTALDATVGVRGVAVIPTNMIDRYGLSGPVS RASGVDLDTRRRTAVYDELKWPEVVIEPRGDAYSRLATLCNDAAVSSSLCRQILDRLPSL DGPLETRLPTAIKAPRGRTWTTIEAPWGRAGYLLESRGSTTPWRMALRTPTFANVQVLEA VLPGTRVDDVEATIASLGWTLGDLDK >gi|302034490|gb|GL383261.1| GENE 54 49770 - 50087 266 105 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3323 NR:ns ## KEGG: HMPREF0675_3323 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 105 1 105 105 127 100.0 2e-28 MAQRVRVDLVDDVDGSPAEESVNFALDGVNYVIDLSAENASKLRDALSLWVDHARRTGGR RTRGRRPTGGPTANEVRQWAKSQGYEVSERGRVSNEIREAYQRTH >gi|302034490|gb|GL383261.1| GENE 55 50418 - 52952 2464 844 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 1 803 2 801 815 953 58 0.0 MFERFTDRARRVVVLAQDEAKALNHNYIGTEHLLLGLISEGEGVAAKALESLDISLEAVR AQVEEIIGHGTSTPTGHIPFTPRAKKVLELSLREALQMNHSYIGTEHILLGLIREGEGVA AQVLIRLGADLNTVRNSVLQLLQGYQGDERQAATSGAPEAGPQQSSATILDQFGRNLTEA ARDGELDPVIGREREIERVMVVLSRRTKNNPVLIGEPGVGKSACVEGLAQAIVRGDVPET LRDKKIYSLDLGSMVAGSRYRGDFEERMKKVLKEIKNRGDIILFIDEIHTLVGAGAAEGA IDAASMLKPMLARGELQTIGATTLDEYRKYIEKDAALERRFQPIQVDEPSIPLAIEILKG LRDRYEAHHKITITDEAITSAANLASRYIQDRFLPDKAIDLIDEAGARMNIRRMTAPPDL REFDERIARVRVEKEAAIDAQDFERAAGLRDDEKKLLAEREAKEEEWKQGDESVPAVVGP DEIAEVLSGATGIPVFKLTEEESQRLLHMEDEIGKRYVGQEDAVKALCRSIRRTRAGLKD PKRPAGSFIFAGPSGVGKTELTKALTEFLFGDEDALITLDMSEYSEKHTASRMFGSPPGF VGYEEGGQLTEKVRRKPFSVILFDEIEKAHPDIFNSLLQILDEGRLTDAQGRVVDFKNTV IVLTTNLGTRDISKSVNLGFSKADDVESSYEKMKAKVTEELKGHFRPEFLNRLDEIIVFH QLTQPDILRIVDLMVGQLEDRLADKDMGIEVTPAAKELLSTRGFDPLLGARPLRRTIQRD IEDVLAEKILFGEVKPGQIVVVDAAPEGSEEPFVFTGTERSELPDEVPPELTSSAGENNR GQQG >gi|302034490|gb|GL383261.1| GENE 56 53005 - 54012 570 335 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3325 NR:ns ## KEGG: HMPREF0675_3325 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 335 1 335 335 665 99.0 0 MTLDDDAPIWAKTIIDGLNRPFPWGSAHQSSGPDDVDVTPWRLHPAFHGCLDWHSSVHMQ WSAVTLLRCANQVIDHTTIDALNGVLNDRLTDENARVEAEYLRIHRGYERPYGWGWATLL AAQCAPLTGTTWASATRIISLQVFENLLAWLPTLTFPVRTGTHDNTAFGIGLCLDAARSL QRPEVIEAIVEHSHRLFDADIDYPSSWEPSGNDFLSAALSEAHLMARVYDVEGRTNEFGT WLHTFLPRLGQSDDNLLNVPRVTDGTDGKLAHLYGLSLSRAWQLRALATWLAEGSRHRIE KATARQINEVSHQITHGDFMATHWLVSFALQAVLV >gi|302034490|gb|GL383261.1| GENE 57 54009 - 54995 952 328 aa, chain - ## HITS:1 COG:CC1199 KEGG:ns NR:ns ## COG: CC1199 COG3817 # Protein_GI_number: 16125450 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Caulobacter vibrioides # 1 323 1 316 318 234 45.0 1e-61 MIKVEWFYWLCGFLFLVTAVVRLRDREDNKRFGSAAFWAILAFSFGYGSFVINKTAPTLV EGIAVLLLVVLAACRFPGRGSTETTTEAEREKSAKKFGNKLFMLALIIPFVAAIFAVAGM RNVSFDGSPLLETGMATIIGLGAASVIALVTAMIMFKVRSPVVAFKEGDRLLGHIGWAAI LPQFLATLGTLFNNAGVGDAVGRITSWILPSESLFAAVCVYCLGMALFTLIMGNAFAAFP VMTAAVGWPLLIQHFHGNMAAVFAMGMLAGFCGTLCTPMAANFNLVPAALLELDDSYGPI KAQIPTAVPLLVCTILIMYLCCFPGGLL >gi|302034490|gb|GL383261.1| GENE 58 54992 - 55756 773 254 aa, chain - ## HITS:1 COG:YPO2701 KEGG:ns NR:ns ## COG: YPO2701 COG3819 # Protein_GI_number: 16122905 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Yersinia pestis # 1 218 7 225 243 197 49.0 2e-50 MWVLLAVAIVVIGFALRLNAMLVVAVAGIAAGLIAGMSPVKLIETFGTGFASSRSVTVFI VVLPVIGLLERHGLMQQAGRLMSKMKSMTAGKLLAVYLAVRQITAAVGLSSIGGPAQAVR PLVVPMAEAAARRTHPRYTRKMREKLRSYASSADTIGLFFGEDVFIAIGSILLITGFVDA TYNLKLEALQIALWAIPTAICAFLIHAPRLWLLDRKLAKMAAEGGDNVDTDEVPEPGHTV SLPSGGNPEQGVHE >gi|302034490|gb|GL383261.1| GENE 59 55656 - 55847 64 63 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRPAAIPATATTSMALSRKAKPMTTIATASKTHMVRSSRVLGCCGVTLEAIGPPEGVSTQ KTC >gi|302034490|gb|GL383261.1| GENE 60 55879 - 56649 688 256 aa, chain + ## HITS:1 COG:ML0333 KEGG:ns NR:ns ## COG: ML0333 COG1540 # Protein_GI_number: 15827090 # Func_class: R General function prediction only # Function: Uncharacterized proteins, homologs of lactam utilization protein B # Organism: Mycobacterium leprae # 1 254 1 250 252 275 57.0 7e-74 MATVDLNADMGESFGSWKTGDDESLLGIVTSANVACGFHAGDAVVMGQTCKAAAEHGVCI GAHVSYRDLAGFGRNFIDVDPGRLRDEVIYQLSALRGIAAVHGASVRYVKPHGALYNTIV HHQAQAKAVVEAIDAVNSATGADMAILGLPGALVLDLAEQQGVRTLSEAFADRAYNPDGT LVSRRQEGSVLHDPGEVAERVVTLVTQGSVTAIDGTKVPIKVDSVCVHGDTPGAVAMATA VRDRLASTGIELRAAA >gi|302034490|gb|GL383261.1| GENE 61 56646 - 57266 287 206 aa, chain + ## HITS:1 COG:AGl1866_1 KEGG:ns NR:ns ## COG: AGl1866_1 COG2049 # Protein_GI_number: 15891050 # Func_class: E Amino acid transport and metabolism # Function: Allophanate hydrolase subunit 1 # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 205 26 228 253 168 46.0 5e-42 MRLLPAGRTAVLVELDDAGQRRRLHRTLSEHPAVGTVDLVPAQTTVLIDVESPDQLPAAV AHVQEFIAAGLDCVEQGAREIVEVPVRYDGLDLSDVAELLSMTTDELVKRHSDQQWTVEF AGFMPGFGYMSGADWPYRIPRRDSPRTRIPPGSIALADGFTGVYPQASPGGWQIIGTTDA ILWDETADPPALLLPGAVIRFEVVDS >gi|302034490|gb|GL383261.1| GENE 62 57263 - 58132 267 289 aa, chain + ## HITS:1 COG:ML2550 KEGG:ns NR:ns ## COG: ML2550 COG1984 # Protein_GI_number: 15828371 # Func_class: E Amino acid transport and metabolism # Function: Allophanate hydrolase subunit 2 # Organism: Mycobacterium leprae # 9 282 13 286 305 179 42.0 7e-45 MTHFVVETAGPRTLIEDAGRRGWADLGISGCGAWDRRAYLDGARLVGNGAGLGCLEILLG PVRLRCVGGPVLVAVTGADAQIDLDGAPRPSGWGFLVTDGQTVSIAMPATGLRSYFSVTG GINASPTFASVSADPTRGMGPAPLKAGDRVSVGDGPAGLISTTPVDIQQAPTELVLHGVW GPRDDWFTDAGRRSLEQTPWRVAQASDRVGTRLEGPSLERAVTGELTSEPVMRGAIQVPT SGVPLVFGPDHPTTGGYPVIGVVDPEDADRLAQARAGVVVRFAMTAHDW >gi|302034490|gb|GL383261.1| GENE 63 58296 - 59783 1161 495 aa, chain + ## HITS:1 COG:MT1289 KEGG:ns NR:ns ## COG: MT1289 COG0477 # Protein_GI_number: 15840696 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Mycobacterium tuberculosis CDC1551 # 29 455 18 429 579 360 48.0 3e-99 MSPEQSSVAHVEHLARDRDGHVVTEEQAWSALWALLIGFFMILVDTSIVTTALPATIRAL NANLNQGVWITSAYLLTYAVPLLITGRMGDRWGPHRMYIIGMLVFGVSSLACGLSPTIGV LIAARAVQGIGAALMTPQSLSMITRLFPPEKRGAAMGLWGATAGVASFVGPVLGGILVDT LGWEWIFFVNVPVTVIGLWLAIRNVPALETHGHAFDWCGVVLSGIGMTLLVFGIQEGEQY NWGTITDIISVPLLIVLGVVFMVLFVVSQTQWAQSRLHARSTNFEPLVPLRLFTKRNFTL ANIAIFLVGMLVTSYFLPTAIYLQNVRGKSPTVAALLLIPTAVVSGVLSPVVGRVLQHRR SGRMAAIGVSLYVISSIGWWLFTVPSTGLWVFPLLSVITGVGAALTWSPISLVGTDDLGQ ADAGAGSGVYNATRQVGSALGSAFIAMMMDARIMARHDLGRGLGESMFITITAGTICVIV CAFFANFQRSRQRNS >gi|302034490|gb|GL383261.1| GENE 64 59851 - 60750 534 299 aa, chain + ## HITS:1 COG:MT2273 KEGG:ns NR:ns ## COG: MT2273 COG1090 # Protein_GI_number: 15841707 # Func_class: R General function prediction only # Function: Predicted nucleoside-diphosphate sugar epimerase # Organism: Mycobacterium tuberculosis CDC1551 # 3 294 7 297 302 223 44.0 3e-58 MRIAIGGFAGLIGTALVQRLRKEGHDVVTLTRHKPIQPSDRRWDLDTLSIAPPFLDDVDA VVNLAGAPIADGRWTDERKTRILASRIDSTRVVVRALASSPRCRIFLNGSAVGYYGPHGD EWLDENDPAGAGFLAEVCQRWETAANSAPDGVRVATLRTGHVVSSFGGMLGKERPFFQFG LGGKIRDGSQYMSWISLHDHVSAMMKVLTDDAMSGPVNLVSPNPCTNAEFTTALAQAMHR PSVIPFPVPAAKMIFGSQLVDEALCSGQRVKPAKLLEHEFEFRDTSITESITSALAGRR >gi|302034490|gb|GL383261.1| GENE 65 60747 - 61655 550 302 aa, chain + ## HITS:1 COG:MT0119 KEGG:ns NR:ns ## COG: MT0119 COG0705 # Protein_GI_number: 15839491 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein (homolog of Drosophila rhomboid) # Organism: Mycobacterium tuberculosis CDC1551 # 75 270 59 244 284 104 36.0 2e-22 MSQNNQRPDGFSRPDEWGSWQDEPQQNHGDASGAASHARPAQRDESTASQPEPYRSVDVD PSWAPPSASYQQATPRPVARVKRHSDVPVVTWTLIGICFLVWVGEWLSPQVGEAVVLAPR VGFTEPWRFVTSMFGHALSIFHIGFNMYALWALGRSLEPFLGRARFLAAYLMSGLGGGAL FCLMATADGGRAILPNVDDGVVGASGAIFGLFGVLLIVQRRLGASTRELWVVLAINAALL LFISGIAWQAHLGGFLVGMMCGVIFFEDPKRIQAGKSAQTWPRMALLLFAMVAALVVKYL VI >gi|302034490|gb|GL383261.1| GENE 66 61673 - 62227 231 184 aa, chain - ## HITS:1 COG:Cgl1057 KEGG:ns NR:ns ## COG: Cgl1057 COG0563 # Protein_GI_number: 19552307 # Func_class: F Nucleotide transport and metabolism # Function: Adenylate kinase and related kinases # Organism: Corynebacterium glutamicum # 39 171 4 144 177 99 43.0 4e-21 MLSLAQGDETGEVLIDVNRFDLLEELILAEPLRHGQPVVLIDGRSGAGKTTLANTLICHH ADWQLVHADDLYPGWSGLSAVWDLRDLVARRRYRRWDWYQNRFDDEVILNANRPLVIEGC GVLTPTNAPLASLRVWCEVSAPLRRHRALARDPEFRDQWAMWAVQEGLHIARHRPADLAD LTIS >gi|302034490|gb|GL383261.1| GENE 67 62301 - 62957 526 218 aa, chain - ## HITS:1 COG:BH2213 KEGG:ns NR:ns ## COG: BH2213 COG2197 # Protein_GI_number: 15614776 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Bacillus halodurans # 2 214 1 210 217 134 36.0 1e-31 MLPVRVLLVDDDTLVRRAVRQILEAADDLEVVGEASDGDGAVRQAPQADVVLMDLRMPGM SGVEATSRITHSPSSPKVVVLTTVTADAAITDAVHAGASGFLLKASSPDDIVNAVRAVHA GDAFMSPTSTRQLLEQLRGDAGRRVRGAARKTLSALTDREREVAIAVAEGLTNDAIAARL NVSASTVKAHLSTIQTKLDVDSRVRIAVLVERAGYLAA >gi|302034490|gb|GL383261.1| GENE 68 63037 - 64269 811 410 aa, chain - ## HITS:1 COG:BS_yvfT KEGG:ns NR:ns ## COG: BS_yvfT COG4585 # Protein_GI_number: 16080460 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Bacillus subtilis # 162 408 93 322 328 67 28.0 3e-11 MIEYEVVGDDRRPAVWLSIVLIAIGILGCFTSTAFCPLALRMTAQNPSGLTVLHGVAALV ADMVLPVGLLWRHRQPFTITLVTAAISLVLPIGNTVPLIALACLLGRRRGAASWWATAAV TITTTIVGIVDAARSPKAASTIKTLLSPANTPDAADLTVSWFTVAAFIAAGLIISIGSGL WRRTQRATTSLTRERDVAQATNAKLGDELSRREERERIAQEIHDQLGHRLSLLSLQSGAL ETQLRDNPDVVKAAHEVQAGAAAAVNDLHSLLSVLTESRVTPDLPLSKLAEVIDESFGAG QPLNSSVFIEDADRVDPAVSRAVYRIVQELLTNAAKHAPGQTTTLRIRGNPRDGISIDAT NGYIGGWAGGPSAHSRGLKGITERVELLGGSLHYGLDDNLFHVHVDIPWQ >gi|302034490|gb|GL383261.1| GENE 69 64313 - 64510 60 65 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|327456632|gb|EGF03287.1| ## NR: gi|327456632|gb|EGF03287.1| hypothetical protein HMPREF9586_01012 [Propionibacterium acnes HL083PA2] # 26 65 1 40 40 63 100.0 4e-09 MGENTCPIGHLRSVRSADAGGPDPGMHWCGAERRHQCPMTSNHPTTHNRNTREKVRKVSP TPNMP >gi|302034490|gb|GL383261.1| GENE 70 64420 - 65016 594 198 aa, chain + ## HITS:1 COG:no KEGG:PPA0291 NR:ns ## KEGG: PPA0291 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 198 1 198 206 331 100.0 8e-90 MSNDQQPPHYPQPQYPGEGPQSQSNPQYALNSGGMPPSKPKKPIYKRVWFWIVIAVVILG IFAALGGGSKGGDEQKSGSDKAASAPATSQAKEADKSAGKPAEKPAAKTTDEDQVKGDLA LLKGWKLKKDEFSAHVTGYVRNNSDESINNYIQIEFNAYDASGSNTDTCLANTNTIDAHG KWKFDAICSQNPSEIKTV >gi|302034490|gb|GL383261.1| GENE 71 65222 - 66175 621 317 aa, chain - ## HITS:1 COG:lin2530 KEGG:ns NR:ns ## COG: lin2530 COG3711 # Protein_GI_number: 16801592 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Listeria innocua # 36 308 1 274 285 131 28.0 2e-30 MIRRQCSQSPQDDPVQRPDRSRYATTKQGSLRPGHVIVKKIYNNNVLLGVNGSGTEMVVN ARGIAYGRHRGEIVDASSAQRYVAEGAYRTTAIASLLTNATHTEVRVAQAIVELAREELG TPHARRMMLPILDHLVAAVHRAKQGAVIDFPLEWEVRQLYPDEAELGRRAVEIVDGALGI HLQPEEWVAFSLHFINQRWDSKDVSRTMSMTQTICDVFTELEDLWHVEIDRSSMSASRFV THLRYLFARASDNKQLSHVDLDIVGLMSDRYAEATLAASQVAEHMSKVIGNDLTKAEINY IALHTTRLYNEVMGMDG >gi|302034490|gb|GL383261.1| GENE 72 66138 - 66611 222 157 aa, chain - ## HITS:1 COG:BS_ptsG_3 KEGG:ns NR:ns ## COG: BS_ptsG_3 COG2190 # Protein_GI_number: 16078453 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIA components # Organism: Bacillus subtilis # 17 146 11 141 156 137 54.0 7e-33 MSIFRKRRKATPLTIAAPVSGEIIDIADVPDPVFAGKHMGPGFAVAPVSGDFTSPIDGLV MLVAPTLHAVSLRADNGAEVLVHVGVDTVELKGEGFTAHVNEGDRVRTGDPLLSVDLDSI RPRVPSLISPVVVTNAAGFTISERSNDPASVLSVTAG >gi|302034490|gb|GL383261.1| GENE 73 66623 - 68149 1447 508 aa, chain - ## HITS:1 COG:SP1684_1 KEGG:ns NR:ns ## COG: SP1684_1 COG1263 # Protein_GI_number: 15901519 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Streptococcus pneumoniae TIGR4 # 1 405 1 405 422 539 70.0 1e-153 MFKTLQKIGKAFMLPIAILPAAGLLLGIGGALSNPTTVKSYPVLDNPILQDIFQVMSAAG NVIFENLALLLSIGLCIGLAKRDKGTAALAGITGFLVMTATTKALVVLSRHPDRTIDTGV VGSLVIGAVAVWLHNRYHNIELPAFLGFFGGSRFVPIVTAFAGIIIGAFFFVVWPPIQAG MVSAGTAIADWGVIGTFFYGFLMRLAGAVGLHHMIYPMFWYTPLGGTEAVAGKTVVGAQK IFFAQLADPNHVGLFTHSTKYFAGRFATMMFGLPGACLAMWRCVPKGRRAKYTGLFASVA FTSFLTGITEPIEYMFLFVAPLLYVFHSVLDGVSFLVADLINIRIGNTFSGGAIDYLLFG VLQGEAKTHWLYVLPVGALWFVIYYFSFTFFIKKFRIATPGHLEDTMTAATPTDRRSQEK SERRNDGIDETAAEIITALGGAENIEDVDACITRLRVSVKAPDQVSKASLKNLGATEVFE VGGGVQAVYGAKAILYKNAINAQLGIDD >gi|302034490|gb|GL383261.1| GENE 74 68151 - 68444 357 97 aa, chain - ## HITS:1 COG:SP1685 KEGG:ns NR:ns ## COG: SP1685 COG3010 # Protein_GI_number: 15901520 # Func_class: G Carbohydrate transport and metabolism # Function: Putative N-acetylmannosamine-6-phosphate epimerase # Organism: Streptococcus pneumoniae TIGR4 # 3 58 8 63 232 70 57.0 7e-13 MNSVVQSLAKGLIVPCQTLPDEPIYSKSGGVTPLFTTAAAQSGAVDIRANSVRDIKTILS TGADIVAVGGTITRPAQICTQFIDAIRARIPHTSLEN >gi|302034490|gb|GL383261.1| GENE 75 68443 - 68559 72 38 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|332674703|gb|AEE71519.1| ## NR: gi|332674703|gb|AEE71519.1| hypothetical protein PAZ_c03170 [Propionibacterium acnes 266] # 1 38 1 38 38 67 100.0 4e-10 MRTSGNVGYTGLNTLVPAGGSGIAESYKPEIHELLLRR >gi|302034490|gb|GL383261.1| GENE 76 68739 - 69026 81 95 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|332674704|gb|AEE71520.1| ## NR: gi|332674704|gb|AEE71520.1| putative sugar transporter [Propionibacterium acnes 266] # 4 95 50 141 141 187 100.0 3e-46 MGRHQAEDHSDSTVRFRRNSTRICPRTRPVIRVDPFLDGLNVTHTRNFRQFGRVLTVKLT ELHIETSDFSQVLGFHGLDLTRICGTNPVTWPETS >gi|302034490|gb|GL383261.1| GENE 77 68984 - 69166 81 60 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3342 NR:ns ## KEGG: HMPREF0675_3342 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 60 1 60 60 99 98.0 6e-20 MWQLIAIYVCFMGGFYGYTLWLPPRGQGTHVPLAISAVALVVGAALAWVVIKPKITRTAP >gi|302034490|gb|GL383261.1| GENE 78 69321 - 70196 456 291 aa, chain - ## HITS:1 COG:Cgl2617 KEGG:ns NR:ns ## COG: Cgl2617 COG1194 # Protein_GI_number: 19553867 # Func_class: L Replication, recombination and repair # Function: A/G-specific DNA glycosylase # Organism: Corynebacterium glutamicum # 13 284 9 283 293 256 48.0 5e-68 MPDTGLTSQVIEAICAWFDANGRDLPWRRPGTSAWGVLVSEVMSQQTPMSRVIGPWHEWM NRWPTPDDLAEEDSGEAVAAWGRLGYPRRALRLHSCAVAIATEHDGVVPNSYDELVALPG IGDYTASAVVSFAFGGRATVLDTNVRRLIARAESGIANCPTSVTRAERVVADALVPDEDV RAAKWAVASMELGALVCTARSPQCEVCPIRDSCRWVIDGKPDNAPARRGQPWKGTDRQCR GVIMDVVRNSPRGVKVQMALSAWPEPDQASRCLESLLDDGLVHRRGSLISL >gi|302034490|gb|GL383261.1| GENE 79 70189 - 71499 1071 436 aa, chain - ## HITS:1 COG:ML2414 KEGG:ns NR:ns ## COG: ML2414 COG0001 # Protein_GI_number: 15828300 # Func_class: H Coenzyme transport and metabolism # Function: Glutamate-1-semialdehyde aminotransferase # Organism: Mycobacterium leprae # 4 424 18 432 446 431 59.0 1e-121 MTSNAELFSAAQAVIPGGVDSPVRAYGSVGGVPRFIEKAQGPWIWDAEGTRYVDLVCTWG PALLGHARPEVVSAVQVAASKGLSFGAPTRTETELADAIIERMAPVEKVRFVSTGTEATM TAVRLARGATGRDVIVKFAGNYHGHSDVLLAAAGSGVATAGLPGSAGVPAASTADTIVVD YNDVAALDAVFSERGDQIAAVIVESCPANMGVVPPEPGFNAAIRRLTTEHGALMITDEVL TGFRCSPSGFWGLQQQAGEDFAPDIFTFGKVVGGGMPLAALGGRAEVMDLLAPTGPVYQA GTLSGNPLATVAGVKTLQLADAGAYQRLDARSEKWRSELVSALDAAGVTYRLQNAGNLFS VFLGVDSPVRNYDNAKSQNAEAYTAFFHAMLDAGVNLPPSCFEAWFLSDAHDDEAFEVFR AALPKAAQAASQVISA >gi|302034490|gb|GL383261.1| GENE 80 71547 - 72593 929 348 aa, chain - ## HITS:1 COG:Cgl0426 KEGG:ns NR:ns ## COG: Cgl0426 COG0113 # Protein_GI_number: 19551676 # Func_class: H Coenzyme transport and metabolism # Function: Delta-aminolevulinic acid dehydratase # Organism: Corynebacterium glutamicum # 26 345 12 337 339 389 62.0 1e-108 MNPYLPDASDPRMAGVKPLPEGLRPVSRPRRLRTTPAMRRMVAETRVAPAQLMLPAFVKE GIDSPVEITSLPGQFQHSTESIKELATQAAEAGIGGIDLFGIPEHKDEIGSQAWDLKGIL NAGISAVREAVGDDLVICADTCLDEFTDHGHCGALTPDGRVDNDSTVPLYAAMAVSQARA GAHMVSPSGMMDGQIAVIRDALDREGFTDVSIMAYSAKYASAFFGPFRDAVNCSLKGDRK TYQQDPPNRREGLRETLLDLAEGADLVMVKPASHYLDVLSDVAEVSQVPVAAYQVSGEYA MLEAAAANGWIDRRRCIGESLTSIVRAGADLVLTYWAIEAAQMFREDL >gi|302034490|gb|GL383261.1| GENE 81 72623 - 73348 495 241 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3346 NR:ns ## KEGG: HMPREF0675_3346 # Name: hemD_1 # Def: uroporphyrinogen-III synthase (EC:4.2.1.75) # Organism: P.acnes_SK137 # Pathway: Porphyrin and chlorophyll metabolism [PATH:pak00860]; Metabolic pathways [PATH:pak01100]; Biosynthesis of secondary metabolites [PATH:pak01110] # 1 241 1 241 241 385 100.0 1e-106 MTTNPADLVKPPVVVPRDDSHDKFVTTLKQAGYGVIHTALTRTVTLPDAERLTAPDLWQA DWLVVTSKTTVGLLPTPLPNPNIKVAAVGAATSAALRTRGIDVDFVPENHSGAGLVAEWP GGVASILLPASQLTADTVPLGLTKVGCTVNRLEIYTTAAVEKLPEVIAQSWPSVGVVVVT ASSVGRALVELVEPLGWRRQKLVALGKPTARTLEVLGHPAHAVASSPTPEAVLEAVESLV A >gi|302034490|gb|GL383261.1| GENE 82 73345 - 74349 541 334 aa, chain - ## HITS:1 COG:Rv0510 KEGG:ns NR:ns ## COG: Rv0510 COG0181 # Protein_GI_number: 15607651 # Func_class: H Coenzyme transport and metabolism # Function: Porphobilinogen deaminase # Organism: Mycobacterium tuberculosis H37Rv # 4 324 2 303 309 209 48.0 6e-54 MSAIRLGTRASTLATTQSEMVAGLLRSEGLDVNLTTITTHGDTSTASLAAMGGIGVFASA IRAALLEGEADIAVHSFKDLPTGRPLGLAIGAVPARADPRDALVARDGLTLHDLPQEASV GTGSPRRAAQLLAVRPDLTIVDIRGNVDTRLGRVKGLGRYAKNGGKEDLDAVVLAASGLA RLGHSGAVTEFLDPSVVLPAPAQGALAVECRTADSRHGKLAKALARIDDRRTRLAATAER AVLSHLEAGCAAPIGALAQLKPVSGKSLQVLTLDVVVAAVDGSRTVREQVSVELPAEVEP ALAAAHTLGVTAAEELLDDGAADVADLKASGSTR >gi|302034490|gb|GL383261.1| GENE 83 74396 - 75826 704 476 aa, chain - ## HITS:1 COG:BH1204 KEGG:ns NR:ns ## COG: BH1204 COG1232 # Protein_GI_number: 15613767 # Func_class: H Coenzyme transport and metabolism # Function: Protoporphyrinogen oxidase # Organism: Bacillus halodurans # 13 394 10 383 467 92 23.0 2e-18 MNISDPQHVDAVVIGGGMAGLVAAWQFTQEGLHPVLVESRGYTGGLIARSTLAGISYDIG AEGWAVRLPDTAELATELGLTVEKPTIAPSWVYFDDACFAMPDNAILGIPANLSDPAVII ALGAEEAARAAELDRAPMPEDLPRDLGTLVASRMGSEVLRRLVTPIAGGIHAADPHLLSV DVVSPGLRAATQATGSLAAGVALCRSRMPAGPAVASVAGGMFIMPAELRRQAEQAGATTM TRVGARGLTRHGDQWLVETAGTSRNPDPSLPPVTDGEIRSFLTPRVVVACSAGPATKLLS NVIDTVGPELAPGAPIGHVNLALQAPALDSSPRGNGMLVAPGTTTVTAKALTHMSAKWPS LRESCPEGLHLLRVSYGRSGEANVALSVDQALTDASVLLGVDLSAEQVVDSQIIHWTGSL APTTPQARAWRDGLHRQLEVFNQSGQGRIGLVGSWASGSGIAALVPQARRTVRQLV >gi|302034490|gb|GL383261.1| GENE 84 75841 - 76881 720 346 aa, chain - ## HITS:1 COG:ML1043 KEGG:ns NR:ns ## COG: ML1043 COG0407 # Protein_GI_number: 15827506 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III decarboxylase # Organism: Mycobacterium leprae # 1 346 7 357 357 307 48.0 3e-83 MADSPLLQAMTGHRPTVTPVWFMRQAGRSLPEYREAREGTTMLESCLNPELAAEITCQPV RRHHVDGAVLYSDIMVPLALAGAEVRIEPGVGPVLDEPVRTASDVDRITRRHVEDPSVIE EAARLAITELGDATPLIGFAGAPFTIAAYLVEGGPSRDHLSARAMMHSDPQTWARLMEWV ADLDAAFLAAQLRGGARAFQLFDSWAGSLSASDYRASVAPFSQRALATVDPNIPVVHFGI NATHLLSEFAQVAATASRYPVLGVDHRTSLDEACATLMVSGMEMPVQGNIDPALLFAGWE PLESATRDIVAAGRQAPGHVVNLGHGVPSNTDPNVLTRLVELVHSL >gi|302034490|gb|GL383261.1| GENE 85 77017 - 78372 910 451 aa, chain + ## HITS:1 COG:MT0530 KEGG:ns NR:ns ## COG: MT0530 COG0373 # Protein_GI_number: 15839902 # Func_class: H Coenzyme transport and metabolism # Function: Glutamyl-tRNA reductase # Organism: Mycobacterium tuberculosis CDC1551 # 36 405 66 454 495 129 33.0 8e-30 MGLCVLTVDHAEQGLGVVSEAAAQVDGLGLALTDHPQIRSALVLSTCNRVCLIVETSPEA VAQGFDEAALRRCIADHGANVLAESAQLVCENDAVWRLFRVAAGMESMVFGEREVAGQMK RALSEARREQTVSYTIGHVVEEALKTSRHVATETALAAEGRTVVAVGLDLVAQRMDLDGA RVLVMGTGSYAGASCAQLSSRGVAEIQVHSASGRAAGFARRHRVSEALDIDAALAQADLV VTCRGSGVPALSAEAARRAVDARRGRDLMVLDLAISGDVEEPVPAGVEVIDLETIRQAVP ASAEAERAAAEHIIATGVRHFAVDLERRRMAPAVVALRDVISDLVTAELERLPEEGSVPV YEVAASLRRLAASMAHIPSARARMASEQGLGDRWLNSLSDVLGIDVDIAAPVIDMSSFAN ADCMTCPVTGLRVEDLATDAAPEVRRGHRDR >gi|302034490|gb|GL383261.1| GENE 86 78362 - 80413 1258 683 aa, chain + ## HITS:1 COG:Cgl1500 KEGG:ns NR:ns ## COG: Cgl1500 COG0276 # Protein_GI_number: 19552750 # Func_class: H Coenzyme transport and metabolism # Function: Protoheme ferro-lyase (ferrochelatase) # Organism: Corynebacterium glutamicum # 16 351 9 348 370 229 38.0 1e-59 MTANPYAAPTDPLAPYSAVLVVSFGGPRSPEEVMPFLRRVSHGRIPEERLADVARHYDRF GGVSPINDATDVFVNAIGNELRRHGVRVPVLLGNRNGTPFLEEALTDMHAHGVRRVLAVV TSAYASYSGCRQYREEIATALAHASITDMQVDKVPPFNEAPGFIRANAEALMQAFMRIPP TPLEATRVVFVTHSIPDSMQDASGAGQPGTDYISQHKAVCERVAGQVRQVFGNMPQWDLA YCSRSGRPSDPWLEPDIIDHLRSLPEQGVQSVVVAPIGFVADHMEVVNDLDYEAAEAAKE SGLAFTRAATAGTHPAFIADLAGLILSQAAAARGEGGNLTSWPAPCVAGCCRRYPDAQDI PAVSGGDVESVAAGADVVDAEPGGVDFVPSGSASAVDRPGPEAVELETPPSPYNPLTKET PMSDHSSADSVIEGPRDDEVPAGSYTAPTDPRDTPVIPEEVNASSKWAMYSVFRVATALP AEDDERRRLVEGSDEWAGQSGVDTRGWYDLSGLRANADLLVWWVSDDPAVLQDSYHRFRA SGLGRHLEPVWSNVGVHRPAEFNKSHLPSCFAGIAPRRWAAFYPFIRSKEWYLLPAADRS RMLREHGIVGAASSDVKASTLAAFALGDYEWILALEGDDLARIVDVMKDLRYVEARRYVD VDTPFFTGERVSPVVWADRQMRA >gi|302034490|gb|GL383261.1| GENE 87 80358 - 80903 107 181 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|332674713|gb|AEE71529.1| ## NR: gi|332674713|gb|AEE71529.1| hypothetical protein PAZ_c03290 [Propionibacterium acnes 266] # 1 181 19 199 199 290 99.0 2e-77 MRSDPDVTVRVCFTFWVSQWQLVELLTSTVKVSVSPTWGFLVSPVTFTDSCEPSHIVDDA DGVDAKADGDGDSVRGADLLGLTADELAEGVADAHAVSVHDGSGVNDEAAGAADSFDPPA SLAIPAITNATTTTTTTNNISRRTQYVCGDSGPTGSVRPRNDVIRLSSDGRPTPPEKRAR R >gi|302034490|gb|GL383261.1| GENE 88 80737 - 81117 337 126 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3352 NR:ns ## KEGG: HMPREF0675_3352 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 126 109 234 234 219 100.0 3e-56 MCEGSQLSVKVTGDTKKPHVGDTETFTVEVSSSTSCHWDTQKVKQTLTVTSGSDRIWSTD DCGSWGPKGVHEIKSKNPWTYKISWPTKRSTGKCKLSQESLGAGYYVATVNLGGGPSGRF VMRMGT >gi|302034490|gb|GL383261.1| GENE 89 81153 - 82253 567 366 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764769|ref|ZP_02171823.1| ribosomal protein L18 [Bacillus selenitireducens MLS10] # 20 358 14 352 360 223 35 9e-57 MNDVQPDPETSREMQAEQVRHLMALLAPGTPIREGLDRIVNGRTGGLIVLGDGPEINGVC SGGFPLDVRLTPQALRELSKMDGGLVVSSDHERIKAAAVHFVPDGSLPTLETGTRHRTAD RLSQQTGVPVVVVSASMSVMSLFLNGRRYLIERPEQLLARANQALATLASYRGRLIDEAE NLTTLEIRDQVQVRDVAAVAQRVEMWRRIDAEVRGYVSALGVEGRLVQLQRNELSLGVED LGRLLTDDYRPNSVAPGGFSLSGLQKLSWEDLLNVTMVAETINLGPAEHPLDSPIRARGH RQLTLMTDLSSRTIQRIIDHFSDLQSLVSASTSELGDIKGVGLRRAREIRQGLESIFEGD QRTHHH >gi|302034490|gb|GL383261.1| GENE 90 82306 - 83703 922 465 aa, chain - ## HITS:1 COG:MT3691 KEGG:ns NR:ns ## COG: MT3691 COG1066 # Protein_GI_number: 15843198 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATP-dependent serine protease # Organism: Mycobacterium tuberculosis CDC1551 # 12 455 10 451 480 402 53.0 1e-112 MARKTQTPTWVCTECGWTTTKWVGRCGECQTWGSVVEKGAPKLTEVTSSTPTSKAVPIGQ VSEQAANRHLTGISELDRVLGGGLVPGVVVLLAGEPGVGKSTLLLDVAAKWAKAGRRTLY VTGEESAAQVRLRAGRTKSLADELYLASETDLGTVLGHIEQTEPSLMVLDSVQTVGTSQA DGSPGGVSQVREVTGALVRVAKRRGMAVIIVGHVTKEGSIAGPRTMEHLVDVVLNFEGDR HSGFRMVRATKNRYGPADEVGCFEMTDAGIMEVPDPSGLFTSDNADPQPGTCVTVTIEGR RPLLSEVQALVAPSASEKYPRRITHGVEGGRVAMILAVLERKAGLPLSNRDVYVSTVGGA RVSDPSADLAIAVSVASAVLDTNFPTRVVALGEVGLAGDLRRVPGLERRVGEAARLGFDL AVVPRNSREAHTKIPTMHGLHVIEVGSVAEALSVLNLRRQRKVNQ >gi|302034490|gb|GL383261.1| GENE 91 83769 - 85394 1213 541 aa, chain - ## HITS:1 COG:MT2394 KEGG:ns NR:ns ## COG: MT2394 COG0281 # Protein_GI_number: 15841835 # Func_class: C Energy production and conversion # Function: Malic enzyme # Organism: Mycobacterium tuberculosis CDC1551 # 1 537 13 547 548 578 54.0 1e-165 MTNPITNRGTAFTRAERLEHGMIGRLPAAVETLEQQAQRCYRQLQGLGCNIDRYVFLEEL QNRNETLYYKLLVDHLVELLPVIYDPTVGEAIKKWSHAYRRSRAVYLSVDHIEDVRPSFE TLELGPDDVDLLVVSDSEQILGIGDWGVNGTDISIGKLAVYTAAAGIRPERTIAVNLDVG TDNAYLLNDPSYLGNRHARVRGERYDELIHEYLEVASELYPHALLHFEDFGASNARRILV QNAANHRIFNDDMQGTAAIVLAAVISGLKVTRQSFADQRLIVYGAGTAGTGIADQIRAAM ISDGLSQQEAVDRIWLVDRNGLVTDDMKGLPDYQEPYAKPVEKTRHWAHTNRHIGLTETI RRIHPTILIGTSTDHDAFTQQVVEEMCREVERPIIMPLSNPTEKIEAMPADVIAWSKGKA LVSVGIPVAPFHYEGTRYEIGQGNNALLYPGLGLGVIVSGAERVSARMIRAAAEAVASQV DPRPAGSSLLPAVENLRASSATVAVAVVQAAIEEGLATKKPSNVVQAVQDAMWWPHYPPV G >gi|302034490|gb|GL383261.1| GENE 92 85479 - 86117 470 212 aa, chain - ## HITS:1 COG:no KEGG:PPA0314 NR:ns ## KEGG: PPA0314 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 212 1 212 212 426 99.0 1e-118 MHVDHLMFAAGPAGLDEDAARLGEILGTSFINGGIHPSFGTRNRILPLSGPRYIEIVEVL DHPAAEKAVFGQAVRARQEQGGGWMGWAVSVDDLAPYEKRLERQSVPGKRTFPDGRHLEW RQIGIKGLMADPQLPFFIKWTSPTELLPSSLSGNVTLTSVEMSGSRQRVEDWLGETIPDE VEGITFNFASPNGHPGIDAVTFDTPSRGCVRI >gi|302034490|gb|GL383261.1| GENE 93 86269 - 87156 482 295 aa, chain + ## HITS:1 COG:MT0518 KEGG:ns NR:ns ## COG: MT0518 COG1082 # Protein_GI_number: 15839890 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate isomerases/epimerases # Organism: Mycobacterium tuberculosis CDC1551 # 18 280 4 280 280 197 42.0 2e-50 MPDCFGLSETTTTSASVAPRVTLSTTSVYPESTADAFARAKAIGYDGVELMVGIDPVAAD VDRIVDLSAEYGVTVSSIHAPCLLVTPNVWGSDPWGKLDNAAEAAGRLGSKLIVVHPPFR WQRDYAGRFEEGIAKFNEKYFPLVFAVENMYPWRTPAGRFAAYSPGFDPTNLSYDHLVLD LSHAATAQMNSRTLVDLWGSRLRHIHLTDGSGTFKDEHLLPGQGNQHAWEVIERAVTGGF DGDIVLEVNTRKFSGEGAGQGARFEALSETLTQTRLAIDRGIFARRSGQAWEGAR >gi|302034490|gb|GL383261.1| GENE 94 87219 - 88115 450 298 aa, chain + ## HITS:1 COG:MT1225 KEGG:ns NR:ns ## COG: MT1225 COG0506 # Protein_GI_number: 15840631 # Func_class: E Amino acid transport and metabolism # Function: Proline dehydrogenase # Organism: Mycobacterium tuberculosis CDC1551 # 13 298 26 321 329 140 36.0 2e-33 MRLAMDPTIAHKVSRSRIAREIAVTYVAGEDVASAVDKAADQVSKGLDVSLHPLDPDPAD LAQARRAMVRLCGVIERLGADPSFNGHAEVSISLAALGLKVSDDLARDHARQVCQVARDN HVAVTVDDEGPDIHDRSHRIVMDLLSEYENTGIVIQAARHDSLMQVRELAAPGRRIRLCK GSYTGPRSVTLIRPHDVDLRMAACLRALMTGPSTVMLASHDPVFVALGEQLMASLDRQLE FQMLQGIRPLEQRRLVDIGHRMRVYLPYGHDWYRYCTRRIVERPGNIWLFGRSLVERR >gi|302034490|gb|GL383261.1| GENE 95 88251 - 88976 530 241 aa, chain + ## HITS:1 COG:Cgl2838 KEGG:ns NR:ns ## COG: Cgl2838 COG1266 # Protein_GI_number: 19554088 # Func_class: R General function prediction only # Function: Predicted metal-dependent membrane protease # Organism: Corynebacterium glutamicum # 11 241 2 217 219 127 38.0 2e-29 MFVLAVSLGQSAWYSILRMIERLTRGVPMNQQTSTLNSSVTPGRPWLDLLYQLSDIAFGV VPALLAVLLLAQVKPPRQGVRRALGLEAPGWGRDVGAGAMLAAIIGIPGLGFYWAAHALG FNTTVRAADLQHVWWTAPVLIGLAGMNAVLEETVMIGYLFTRWGQIGWSTTMVIFTSAII RATYHLYQGWDDFIGNIVMGLFLGWVFSRRCRLLPLIVAHAFLDIVSFLGYAYLAGRVSW L >gi|302034490|gb|GL383261.1| GENE 96 89021 - 90064 661 347 aa, chain + ## HITS:1 COG:MT3811 KEGG:ns NR:ns ## COG: MT3811 COG0136 # Protein_GI_number: 15843328 # Func_class: E Amino acid transport and metabolism # Function: Aspartate-semialdehyde dehydrogenase # Organism: Mycobacterium tuberculosis CDC1551 # 4 347 3 344 345 391 64.0 1e-109 MGIMKLGVFGATGQVGRVMRTLLAERHFPADEVRFFASARSAGQKLSWNNGSGDSEVVVE DTATADFAGLDIAIFSAGGGTSREFAPRVAAAGAVVIDNSSAWRRDPDVPLVVSEVNPED VAKRPKGIIANPNCTTMAAMPVLKPLHDAAGLTRLVVATYQAVSGSGVAGVRALTDQTTA IDDPAGLALDGRGVPVADLGPYVAPIAFNALPVAGNFVDDGSGETDEEQKLRNESRKILH IPDLLVAGTCVRIPVYSGHGLVVHAEFRESLSPEKATELLTQAPGVRVVDVPDPRSAAGI DPSLVGRIRADQSAPAGKGLVFFCAADNLRKGAALNAVQLAELVAAE >gi|302034490|gb|GL383261.1| GENE 97 90097 - 90852 605 251 aa, chain + ## HITS:1 COG:Cgl0406 KEGG:ns NR:ns ## COG: Cgl0406 COG0345 # Protein_GI_number: 19551656 # Func_class: E Amino acid transport and metabolism # Function: Pyrroline-5-carboxylate reductase # Organism: Corynebacterium glutamicum # 4 250 18 270 273 145 42.0 9e-35 MAGALVGGLIDAGQMKAEDVVATARSASHRDEIANTLGVTTSGDNTTAVRDADLVILGVK PYAAVDVLEEVSGALKADAVVVSIAAGVTTEKLLMAWQGKIVRVMPNTPVRVGKGAFIVS SAPGSEDAAKKVGDLLESVGVVVTVPEELHNAATAVSGSGPAYVFLVAEAMIDAAVALGV PRDQASQLTVATLAGSAELLAGGEHPAVLRSKVTSPGGTTAAAVAALEAGGVRSVFADAM TACRDRAAGLS >gi|302034490|gb|GL383261.1| GENE 98 90916 - 91089 115 57 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSVGQELRTYLGAPSFQFQRKRLTVGSVIKKRRKRMAKKKHRKLLKKTRIQRRRAGK >gi|302034490|gb|GL383261.1| GENE 99 91109 - 91450 194 113 aa, chain + ## HITS:1 COG:no KEGG:PPA0321 NR:ns ## KEGG: PPA0321 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 113 1 113 113 222 99.0 5e-57 MWRHQHGMAALRSGELRPLAPLVEGRVIIVTRQGCHLCDEVIGLVARLRQEHRDLVPEPM IVDVDANEDFRSRWGDHVPVIFVDGTLISYWTLDADTFLSALRDGPSLPAVLP >gi|302034490|gb|GL383261.1| GENE 100 91574 - 93289 1122 571 aa, chain + ## HITS:1 COG:Rv0511_2 KEGG:ns NR:ns ## COG: Rv0511_2 COG1587 # Protein_GI_number: 15607652 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III synthase # Organism: Mycobacterium tuberculosis H37Rv # 287 564 1 275 275 300 56.0 4e-81 MTDEAHQPTPQPAGDLGTASSQARVQFVGTGPGDPNLLTLGAVDAINRAQVIVISCAEHR MLLGSDFLGLRPDVRIVLAGGVDEEAAVLPSQPGTGAPTPVDVDEHCADVTATVIDAASQ GLEVVRLVSGDPFLDGDIGAEAAAVARADYDVDVVPGVTGMTAVPEYAGLTLHGHDVQLI GDAACQRDIAGHGSNWSDQGLVVVNTEAGKLKEVVKHAIESGRGEDEPAALICHGATTQQ TTHTVTLGELPQTAKTARLGDAEPVHVAIGKVVEAPEREQLDWYESKPLFGWNILIPRTR DHSATLPSRLQSYGAHSLDVPTISMEPPRTPQQMDKAIRGLVEGRYEWVVFTSANAVRAV SEKLEQIGLDARAYSGLRIAAIFDSTINALAEWGVRPDFVPSGEQSTRALAAVFPAFDEA LDPINRVFVPRADIATESLSADLSELGWEVEDVVGYRTVRAAPPPAETREAIKTGKFDAV VFTSSTTVRNLVGIAGKPHKHTVVAAVGMRTAETCREHGLTVDVIAPEPTALSLADALAD FAAKRRDDMVAKGLPVVRPSQRKRRGRHPSR >gi|302034490|gb|GL383261.1| GENE 101 93360 - 94028 398 222 aa, chain + ## HITS:1 COG:Rv0525 KEGG:ns NR:ns ## COG: Rv0525 COG0406 # Protein_GI_number: 15607665 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Mycobacterium tuberculosis H37Rv # 1 202 1 200 202 182 52.0 4e-46 MGATTTVHLLRHGEVDNPTGVLYGCMPGYHLSPLGRRMAARAAEHFAGAELSALVSSPLE RARETMAPIAALHPGLEVRIDSDVIEAANVFEGQVFGKDNKALRSPRNWRYLSNPLTPSW GEPYVEIAERMTRAIMRAAEEVPAGGQALIVSHQLPIWIARCAAEGRRLPHDPRFRKCTL ASVTSFGVLHGRIVRVDYCEPARDLIPAKDRRANISAGGAQG >gi|302034490|gb|GL383261.1| GENE 102 94025 - 94594 365 189 aa, chain + ## HITS:1 COG:MT0548 KEGG:ns NR:ns ## COG: MT0548 COG0526 # Protein_GI_number: 15839920 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Mycobacterium tuberculosis CDC1551 # 4 187 16 205 216 107 36.0 1e-23 MKTRLIATLAAATLVVTGVSACSSTSASDDKGFAAGDGSWSKLPADKREPAAVLTGTDLN GKKISTADAKGKVIVVNVWGSWCAPCRHEAPALVKAADSTKNVAAFYGINTRDLDPGPPQ AFSRTFHISYPSFYDPDGALLLKFTELPPKAIPSTLVIDRKGRSAARFVGEVSTATLVQA INDVAKESQ >gi|302034490|gb|GL383261.1| GENE 103 94642 - 95352 545 236 aa, chain + ## HITS:1 COG:ML2411 KEGG:ns NR:ns ## COG: ML2411 COG0785 # Protein_GI_number: 15828297 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Cytochrome c biogenesis protein # Organism: Mycobacterium leprae # 4 226 16 251 262 125 38.0 6e-29 MAGAIPVAVFAGLLSFFSPCVLPLIPGYLSYVTGLGAADVIEGQRRARTVVGTVLFVVGF TVVFVATGTIIGTLGKVLVGHRRAIEIIVGALTVVLGAMFAGLVPLGRRELRIHRLPRAG LAAAPILGIVFGLGWTPCIGPALSVVYGLSLTQGSAVRGAVLAICYSLGLGIPFIAAAAA VVWMGRTIDAMRTHQHGVQRFGGILLMTVGVLLVTGWWESIMAMLRAWAAKFGAVI >gi|302034490|gb|GL383261.1| GENE 104 95430 - 96941 1074 503 aa, chain + ## HITS:1 COG:Rv0528 KEGG:ns NR:ns ## COG: Rv0528 COG1333 # Protein_GI_number: 15607668 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ResB protein required for cytochrome c biosynthesis # Organism: Mycobacterium tuberculosis H37Rv # 4 474 1 492 529 240 36.0 4e-63 MRWVWGQLTSMRTALILLFLLALAAIPGSVVPQSAQSAMKVSDFAANHPTLDRICRPLGM YHVYTSVWFSAIYLLLLISLIGCIVPRIVSHAKALRRQPPRVPARLDRLAAHASMITSAS AAEVSQRAQQWLTSHRYRFVVDDDGSLRAEAGRHRETGNLVFHIFLVFVLVGVGWNTLWG FKGTSVVVEGQGFSNSITQYDEFKAGAMVDTDNLTPFSMKLRKFVVSFETGTVQRGAARS FDATVDLTMGGKTQTRDLQVNHPLRIGSTKVHLLGHGYAADVVVRDGDGKVAYSGPVVFL PQDANFKSVGVIKVPDARPDRLAFQGFFLPTGAITAGGPTSLFPDALNPQLYLIAWYGKP TVETGVPSNIYTLDTTGLTQVTNGKDKARFVLSPGQRYKLPDGKGSIQFNGWQRWAKIQV SQNPGLPLTFLSVVLSVAGLCVSLFSRSRRVWVRTIPGDDGLRVEIGGLDRSDSRSGAVD DVNSLLAALHGGSMSGDVGEEHS >gi|302034490|gb|GL383261.1| GENE 105 96938 - 97831 798 297 aa, chain + ## HITS:1 COG:ML2409 KEGG:ns NR:ns ## COG: ML2409 COG0755 # Protein_GI_number: 15828295 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in cytochrome c biogenesis, permease component # Organism: Mycobacterium leprae # 42 297 70 326 327 183 40.0 3e-46 MSVENLSAVGIVTAAVLYMLAFLAHAVEWASVRGTEHPSHEERLRSETWGRMGLNLTVLG AACAAIGVVCRGIAAHRLPWGNMYEFVTSALFFVVIAYLVLVAIHHVRWMGIAVTLLLAV GNGLAATVFYVAVAPLVPALHSVWFVIHIVAACIAAAALNVGAIASIMYLIATNAQAKAQ RTGVPVKGLVAKLPPLESMDALAYRAHAIGFPIWTFTIAAGSVWADYAWGRFWGWDPKET WSLVTWVVYAAYLHARSTAGWRGRRAALIAIVGAACFWFNFVGVNLIFNGLHSYAGI >gi|302034490|gb|GL383261.1| GENE 106 97818 - 99281 1079 487 aa, chain + ## HITS:1 COG:no KEGG:PPA0329 NR:ns ## KEGG: PPA0329 # Name: not_defined # Def: putative sigma subunit # Organism: P.acnes # Pathway: not_defined # 1 487 1 487 487 900 99.0 0 MPESDMTGSFSESRDDWLPQLYQERWDAFVRLATLLLADQQVAEDAVIAAFATSYLRDPK LHSYEHAVSYVRTAVVNKARSRQPAERDATPPETPEDLAYWCLRGLLARQREVLVLKLAT PDLSDDDIAETLGMSVSAVRNNETKGLIAIGERLRPGSQTNPGHADPRVEAVVRSALETF AESIHPMSRYDAIISQIACRPHRGRPTTWVIVLACGLAFLVGVLLPLLGSGNGSTMGDPE ALPSIRTPESSSQSLSTLQTGLDVFYLGRDDGLIHRELRDLPTSGDRLGTAVGAVLNVAP LDPNYTSGWAAGQVKRATVKGNRITLDLSASAFSQFKNGEQVQRAIQQLVATATAAVGDR TGDKSVRILVDGSPNLPIIGKPATDFVDEGFARCARVWVDSPQAGADMSAGTITISGVAQ PTVSVMSYEVRPPQSSRIITSGQINLSANDGDKWRPWHATFTMPKGEYDLIIREGTHIAD EKVITAK >gi|302034490|gb|GL383261.1| GENE 107 99293 - 100087 571 264 aa, chain - ## HITS:1 COG:RSc2321 KEGG:ns NR:ns ## COG: RSc2321 COG0300 # Protein_GI_number: 17547040 # Func_class: R General function prediction only # Function: Short-chain dehydrogenases of various substrate specificities # Organism: Ralstonia solanacearum # 14 263 12 261 275 179 41.0 7e-45 MNDMEATRDERPWALVSGASGGLGQAFSRHLASCGVNLVVTGRRHDVLDDLADQLTTRYG IQTIVHPCDISSASERLALVNEIAGRGIIIDTLVNNAGFGAAGRIAETDPERQTSQVEVN CEAVVHLCGLLLPGMITAKRGSIINVASTAAFQPIPQFATYAASKSFVLSFTRALWAETN GTGVRATAICPGPTETGFFDVAGVPRMAAGARRDPDDVVRTAFDALARHRPYAVDGFVNR TVARLAPHLPARLVMTQAEKYLQV >gi|302034490|gb|GL383261.1| GENE 108 100304 - 100795 118 163 aa, chain - ## HITS:1 COG:no KEGG:PPA0331 NR:ns ## KEGG: PPA0331 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 163 195 357 357 323 100.0 1e-87 MCLVCDLPRVIKSLSIIESIGFIIATALFTADFVFIFLPVTTQWLRVNKLSTKFLEVLFS VFSFLIVYQFQASKMTSASTPYLMVDIWLIVAIFIMWLITHNKANEVVSQQDHIRDLQDQ LQTLRMSEPQQIVEPDTVGHAPKESSRLRLLGMVINPFQRPRF >gi|302034490|gb|GL383261.1| GENE 109 101587 - 102291 448 234 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3373 NR:ns ## KEGG: HMPREF0675_3373 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 234 1 234 234 371 100.0 1e-101 MFTLTSTPVTFIGLLILFAWSLVWSVRDAIKAPTVVTRISTWVHVVMAVTMILMVPKSWW KPIVPAIGGPITPVIIFAICTAWMVFMAAWRSSWSSWGHAAMFAAMVWHLAAMRKMSSLM TAPRDSGMGQMNHTHSGMHGPGMQTAMNAAMHDYAVVGVPLMVALLAMAVAGLWRAISGR AENPGKAPTCHVVATEPLAIRLSGLADFAMAFGMAWMSTGLLSPVMPFTAHLHP >gi|302034490|gb|GL383261.1| GENE 110 102415 - 103815 415 466 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 1 455 1 448 458 164 27 4e-39 MEHYDIVVIGSGSGNTILDEDFADRRAAIIDSGAFGGTCLNVGCIPTKMFVLPADFASSP SEAVRVGVDLQFRGASFASIRDRIFGRIDSISKAGLSYRQGLDNIDVYTGEAAFIDAHTL EVGGRCITADQIVLAAGSRPRVPDVPGLDDPSMAGLIHTSDTIMRLAELPQRLVILGGGL IAAEFAHIFSGLGSQVTVINRSGRMLRHEDREISQRFTEQMGRRVRLRMAEGLVGVDRDP GGHLVVLTVDGDGVDYDYPADVVLNATGRVSNGDRLNLPAAGVDVDDDGFVVVDKHQRTN VEHIWALGDVCSPWELKHVANHEARVVRHNLLHPDDLASSNHCFVPHAVFSNPQVASVGA TEQGLLQSDTPYAAYLQEYADVAYGWAMEDEGHCVKLLGDPQTRTLLGAHIIGPQASTLI QTCIQGMSVGQTVDEMARGQYWIHPALSEVVESALLGLGKEMDTTR >gi|302034490|gb|GL383261.1| GENE 111 103898 - 104914 969 338 aa, chain - ## HITS:1 COG:Cgl1589 KEGG:ns NR:ns ## COG: Cgl1589 COG0614 # Protein_GI_number: 19552839 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Corynebacterium glutamicum # 55 335 2 279 282 141 29.0 2e-33 MSTPHTRRRATRVTAAVLTGLCAISMSACAGSSTEKSSSSSSGPARTVMSCNEKLTFTSV PKRVIMLGDTDASTMNALGVLDHVVARAGRIKEGAYDAKTLAKLKAIPTIASQELNTGGV KVSTETILDQHADLVIGYDTGVDRDALRKSGVKMYSTDAMCTDKKPPAPATFSQVKDEVT KVGQIFDVPDKAKQVNKELDAKISTIQKQTASGAKANAVALYITPGSTEFYTYGSSSMIE PMFAANGLRNMYHSNTTRVFDADMEDLLHKNPEWIVLLAGDGAMSKVEPTFLSFKGAKEL KAVKKGHVVTMSFSLTDPPTPLTITGTEKLHDLIKDKK >gi|302034490|gb|GL383261.1| GENE 112 104926 - 105684 231 252 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 236 1 245 245 93 28 8e-18 MINASQLVVRRGQRIVLENIDFSAGQGVTVGVVGPNGAGKSTLLSALYRNVSIASGQVTV SDHDLASMSRREIAREVAVVSQTPDPSLPLTVRDTVALGRLPHRSLMGYGDAADRNIVEE ALTRTDLTDLADRLVTQLSGGERQRVLVARAIAQQAGHLLLDEPTNHLDIGHQFALLDLV RTIKATTVIVLHDLNLAARVCDQLVLLAEKHLVATGSCEDVLQPDLLSKVYEVNVERITH NGHIHLLFNPPR >gi|302034490|gb|GL383261.1| GENE 113 105681 - 106715 777 344 aa, chain - ## HITS:1 COG:Cgl1588 KEGG:ns NR:ns ## COG: Cgl1588 COG0609 # Protein_GI_number: 19552838 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Corynebacterium glutamicum # 10 340 20 354 358 196 43.0 6e-50 MAFLVRSLHRRTPVRFILLVALLVLTPVLSIAFGAAPVPIGQVLGVLADHCGLPVHLSWD SITDAIVWQNRMPRIVTGLGVGAILGAAGVTLQAVVRNPLAEPYVLGVSAGASSGAATAI ILVGISSTFGVAGMAFLGALASTAIVLFMGGGRNSSTLRLILAGLAVGFVFQALTNFIIF SSDSPETARAVMFWTLGDLSRASWAQGWTSIVVAVVLSILLWICAPWLDALASGDSTATA VGIDPAMIRVLLLVPVSAGVAIAVAISGGIGFVGLVIPHLMRSFIGHGHRRLVVSSAIAA AIFLVWADTFSRTVFSPAELPIGVITGLLGAPFLLVLVKRETLA >gi|302034490|gb|GL383261.1| GENE 114 106597 - 106902 122 101 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGTGAAPKAIDSTGVRTSNATSRMNRTGVRRCRDRTKKAILVGAESRGRRVSVVREVFGL GIIRTSVFPGCSQWLATRPSALPLRVSPRFSRGSLRRTAVL >gi|302034490|gb|GL383261.1| GENE 115 106944 - 107831 593 295 aa, chain - ## HITS:1 COG:Cgl0645 KEGG:ns NR:ns ## COG: Cgl0645 COG2375 # Protein_GI_number: 19551895 # Func_class: P Inorganic ion transport and metabolism # Function: Siderophore-interacting protein # Organism: Corynebacterium glutamicum # 6 291 4 294 299 125 32.0 1e-28 MAEYRPYLMRLSSRSLVEPNFIRLILTGDEVRFPQPCLDRRIKLLFIGEHPNPALTDPKV GDGWYQLWLDDPARPEMRTYTVRRVIENGIVIDVACHDGDGPGHRFATSAPLGSQVLVIG LDATAPGAEQTGIDFHPGDAKRLLILGDDAAAPAVCSILEQLPTHAAEVEAVVEVPQLAR KIEAGPDGHWTDSRGNRINIRWQERLSERGDRLAEAIEDHLHRFPLPRCQQDSPEEGPDD LLWDTPASPPQEFYSWIAGESTMVRRLRRILVNDHGVDRRHIAFMGYWRHGSAGM >gi|302034490|gb|GL383261.1| GENE 116 108058 - 108834 201 258 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 1 221 1 210 311 82 26 3e-14 MAKRIETKDLDIYYGSFHAVESVNLIVEPRTVTAFIGPSGCGKSTVLRTLNRMHEVIPGA YCTGKVELDGVDLYGKGVDPVAVRRNVGMVFQRANPFPAMSIRDNVVAGLKLNGVRDNKL LDEACEKSLRGANLWDEVKDRLERSGASLSGGQQQRLCIARAIAVEPEVLLMDEPCSALD PISTLAIEDLVSELKERFTVVIVTHNMQQAARVSDQTAFFNLKAQGEPGRLVEIDTTERI FSNPKEKATEDYISGRFG >gi|302034490|gb|GL383261.1| GENE 117 108853 - 109779 905 308 aa, chain - ## HITS:1 COG:Cgl2519 KEGG:ns NR:ns ## COG: Cgl2519 COG0581 # Protein_GI_number: 19553769 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, permease component # Organism: Corynebacterium glutamicum # 26 302 24 303 307 217 44.0 3e-56 MSATTPDHITHHGDNTPGQLDLSRPSGKRTIKSGCASAFMIVATVLAVIPLAWLLFAAVR RGIGSLFHASWWTHSMDPSFDLAEQGAIHAIVGTLEIGLITSIISVPIALMTAIFLVEYA RGTKIAKVISFAVDVLTGVPSIVAALFVFAVVVTTFGGTQSAWASSLALMILMVPTVLRS TEEMLKLVPDSLREASFALGVSQWKTIMKVVLPTSMTGILTGIVLGLARVMGETAPLIVL LQFNTELTFNPSTPNFATLPTVITNAYTQGGVDTPVVWGAAITLIILVMGLNLIARRIPR RYMRRMGK >gi|302034490|gb|GL383261.1| GENE 118 109776 - 110729 802 317 aa, chain - ## HITS:1 COG:MT0956 KEGG:ns NR:ns ## COG: MT0956 COG0573 # Protein_GI_number: 15840352 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, permease component # Organism: Mycobacterium tuberculosis CDC1551 # 1 315 16 322 324 223 46.0 4e-58 MKPVSRVGDTIFAGASSVIAIALAIIVILMFVFLMKTAAPTLLANTDNFFTSRAWTTDQN PPAFGIQALLWTTVISSLLALLIAVPLSVGIALFITQLAPRKLASPVAFVVDLLAAVPSI VFGLWGGIVFGSSGIINGLRGAIIKALGWIPIFSEDPSWSSATGTVYLASLVLAIMILPI ITAVSRDVMAQTPHDQVEAALALGSTRWEVIKLAVLPHSRSGIISGSMLGLGRALGETLA VTLILQTMSTMALKQNLNLSIFVGGETFASKIAGNFSEAISDPTSLGALVASALALFVIT FVVNATARLIAAKGVKR >gi|302034490|gb|GL383261.1| GENE 119 110889 - 112040 1109 383 aa, chain - ## HITS:1 COG:ML2192 KEGG:ns NR:ns ## COG: ML2192 COG0226 # Protein_GI_number: 15828172 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, periplasmic component # Organism: Mycobacterium leprae # 12 382 72 428 429 227 39.0 4e-59 MNRFAKITALAAISAISLTACGANGDKGSSSASSSKTTSTASSAAQPSDSSADAVSFKPA CPGGSISGAGSSAQLNAINQVISDYKAACSSATVNYSPTGSGAGVKSFIGRQTDWAGSDS VLNADKGEPDKAKQRCNADPWHLPMAAGPIAVVYNVDGVKDLTLSTATLAKIFSGAITNW NDDAIKKENPKAALPSAQIEVFYRKDESGTTDNFTKFLNKAAGDIWTEKHSKTWKGAGKG ADKSAGIAQAVKSTKNSISYDEWSYATKNSLDMAAIDNGNGPVKLTGESAGKAVSAAKVV GQGHDLQLELQYKNTPAGVYPAVLVTYEIACSKGQDSGKAALLKDFLSFYASEREQKKIQ DLGYAPLPSDVASKVLGSAQALS >gi|302034490|gb|GL383261.1| GENE 120 112213 - 113154 570 313 aa, chain - ## HITS:1 COG:Cgl1286_1 KEGG:ns NR:ns ## COG: Cgl1286_1 COG0494 # Protein_GI_number: 19552536 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Corynebacterium glutamicum # 7 144 62 188 194 97 42.0 3e-20 MGGHKGPIQAAGAVVLRDIDDGAREVLVVHRPSYDDLSLPKGKLEPGEDLPTTAVREVAE ETGINIRLTMPLQPIEYTVKYSTRDGKPKSRAKVVSWWLGVAIGGSIENATASPEEIDGA FWMPTDQALERLTYPTDVQVLEEALDLPSTSTIILVRHGKAVSRKEWNSRKRHGKDATRP LERRGRRQAKALADLLSAFGVARLASSSSTRCMQTLQPYADTIGAQITGLDALSEETHEA DPHKATSAMRKIIGRALADPNQPIAICGHRPVLPTMRDALGGANRPMSTAECLIVHLDET GRTIRQEWHSSRY >gi|302034490|gb|GL383261.1| GENE 121 113162 - 115267 1660 701 aa, chain - ## HITS:1 COG:Rv2984 KEGG:ns NR:ns ## COG: Rv2984 COG0855 # Protein_GI_number: 15610121 # Func_class: P Inorganic ion transport and metabolism # Function: Polyphosphate kinase # Organism: Mycobacterium tuberculosis H37Rv # 15 697 46 740 742 728 57.0 0 MAKKPTPGTSPSSPDELPEGRYSDRELSWLAFNERVLDLARDTERIPLLERAKFLAIFSS NLDEFFMVRVAGLKRRIDAGVAVPSVAGMLPRELHDAILARTHDLVSEQSRVFAEEVRPG LVDEGIEILRWAELSDDEKGRMRTLFSERIFPILTPLAVDPSHPFPYIRGLSINLAVMLA NPITGAEQFARVKVPSVLPRLVNLGEGRFLPLEEIISRHLDQLFTGMHVLQHTTFRVTRN EDLEVEEDDAENLLFALEKELLRRKVGRPPVRLEVQDDISAEMLELLTRELDIRDKEVFR LPAPLDLTGLFSLADVDRDDLSYPNFLPITHPHLAEVETARPADMFAAIRRRDVLVHHPY DSFATSVQRFIEQAAQDPQVLAIKQTLYRTSGDSPIIDALVDAAEAGKQVLAVVEIKARF DEQANITWARLLERAGVHVVYGMVGLKTHCKLAMVIRDEGEGLRRYAHIGTGNYNPKTAR QYEDLGLLTSNPIITEDVARLFNHLSGMTAEKRYRRLLVAPESIRSGIIDAIEREIDNKK AGLPAGVRIKVNSIVDERVIDALYRASRAGVPVDLWVRGICSIRPGVPGLSENIRVISIL GRFLEHSRIFWFANGGRPMVAIGSADLMHRNLDRRVEALVGLSNKQHVAEVEEMFDMAFD PGTVSWHLQDRTWTEVSRGPDDIPLTDLQEELIRRTRDRRR >gi|302034490|gb|GL383261.1| GENE 122 115389 - 116033 542 214 aa, chain - ## HITS:1 COG:MT0840 KEGG:ns NR:ns ## COG: MT0840 COG0745 # Protein_GI_number: 15840231 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Mycobacterium tuberculosis CDC1551 # 13 209 28 231 268 170 45.0 2e-42 MARLSLLGPLDAPLPQALELLPHSISRYDDLKECMSHLEGVDVVLVDCHDEPAKAREACL RLSCHERRVPVLLLVGSDTLSVISPDWGMDDFLCDSATPSEAETRLRCLFTIQVTNQLVA GPFTVDEDGYTASVGDKDLDLTYTEFELLKYLVGHPGRVLTRDLLLSDVWGYDYYGGTRT VDVHIRRLRAKVGPEYEGHIQTVRSVGYRFQAER >gi|302034490|gb|GL383261.1| GENE 123 116038 - 117045 371 335 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3387 NR:ns ## KEGG: HMPREF0675_3387 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 39 335 1 297 297 564 99.0 1e-159 MPSHAEIALFEIMSSTMSHPIIPRGTEPSHNIGTTICVVTRMPDEWFRPDEEESGPGEPC PAESVEGPQENENPPSRHADSEETPISSTTSGTIRVLTDDTGPSVVVGHARATGASASSH HRHFPIWILGVAAALVVGLVLGTFITQSRDSTGAAQIAPRALVPASTSTADMPYQGKVKA IGGVKATASCVSDPAVGSRHELVRYDAKYVVDDKPETAWRCNGSGEGQQITLTLPHPSRI VGVGMINGYAKVFGNVDLYPQYRRVRTVRWTMPDGTWFNQDFTDDDQDLQKVMIAPRTVK GDITLTIIASTQPGSLGEPTRDSVLISSVQLYEES >gi|302034490|gb|GL383261.1| GENE 124 117060 - 117497 355 145 aa, chain - ## HITS:1 COG:Rv1897c KEGG:ns NR:ns ## COG: Rv1897c COG1490 # Protein_GI_number: 15609034 # Func_class: J Translation, ribosomal structure and biogenesis # Function: D-Tyr-tRNAtyr deacylase # Organism: Mycobacterium tuberculosis H37Rv # 1 140 1 142 143 166 59.0 1e-41 MRVVIQRATSAEVVVEGRTVGSLTTPGLVVLVGVTGTDTATTAEKLAEKVWGLRILSEEK SASDLNAPLLVVSQFTLYASTRKGRRPSWSAAAPGPVSEPLVDHFVTHLRSLGAHVETGI FGADMKVGLVNDGPMTILIDTDDWH >gi|302034490|gb|GL383261.1| GENE 125 117693 - 118193 454 166 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3389 NR:ns ## KEGG: HMPREF0675_3389 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 166 1 166 166 336 100.0 3e-91 MPFQIPDDLNRDLMPLAWMIGHWEGEGHGNTPDDGEFSFGCQVDFTDNGGDYLHYICQTF TMNPDGTPAAPLRMETGFWRPNVDTRKVDVLMAAPEGWAEVWTGNIDGAKIELVTDAVAR TEEALVPYTGGQRLYGQVEGDLLWTFDRATVDAPLQPYMWARLKRS >gi|302034490|gb|GL383261.1| GENE 126 118195 - 119136 595 313 aa, chain + ## HITS:1 COG:ML2203 KEGG:ns NR:ns ## COG: ML2203 COG0354 # Protein_GI_number: 15828181 # Func_class: R General function prediction only # Function: Predicted aminomethyltransferase related to GcvT # Organism: Mycobacterium leprae # 10 304 17 352 373 150 35.0 3e-36 MSDPVLLTDGPDTGLVSHMRNPIAEQRLMVDGGGSVELSNREVLAISGVDRLGWLHSLTS QFLDGMEPGRTTTSLVLSPTGHVEHVLHGVDDGQTFWAWTEPGRGADLAAWLDSMCFMMR VEVALRPDMTVRWFGHDFAVSDGVVLDSEVAGGHEVILPVDAEIPGDADPVGVLAWEALR IAAGIPRIGLDTDDRTIPNEIGLYGTHMDKGCYRGQETVARVYNLGRPPRRLTLLQLDGS RAELPEVGADIHAGGRRVGAMGSSANHGVDGPIGLALVRRGVDVGLELEVDGIAAGQQPL VDPEVGLHVCPVV >gi|302034490|gb|GL383261.1| GENE 127 119177 - 120562 1289 461 aa, chain + ## HITS:1 COG:CAC2330 KEGG:ns NR:ns ## COG: CAC2330 COG2148 # Protein_GI_number: 15895597 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sugar transferases involved in lipopolysaccharide synthesis # Organism: Clostridium acetobutylicum # 2 449 3 449 461 257 33.0 3e-68 MKKDYFNRTQKLVTVLIDAIVFAVGIFLSFWMRFGMVIPQRNLDDGKAALMASVIAFLII NVLSGVYVLYNKTLLDIGIIAVVDQVMVTIVIMALTFFGRWFAFPRSVLLINLVVGIVLL LVWRSVEVVAYRHLRGAKRVMLLGPPEMLNRAVMNYMANKATRHRLTHVVRGHYLEQIRS HINEFDTAHVSDDIPSSERVAIYDLLLSEDKEIFMSTSFEHMMLINPTIMSIEDETIIAA SPFKIPAEMDIVKRFFDILLSLIALVVASPIMFVTAILVKASSPGPVFYRQTRITKDGRE FKILKFRSMGVMAEKESGPMLATTNDPRVTTVGKYLRSLRIDEIPQLINVLIGDMSIVGP RPERPFFVDQFQEQNAHYTLRHNVRAGITGYAQVYGKYASDFAAKLNFDLIYIKQYSLVL DVKIMIQTIKILFDKVSSRGVDETAEPDENIHLPAEVQQLN >gi|302034490|gb|GL383261.1| GENE 128 120585 - 121322 766 245 aa, chain - ## HITS:1 COG:MT0502 KEGG:ns NR:ns ## COG: MT0502 COG4221 # Protein_GI_number: 15839874 # Func_class: R General function prediction only # Function: Short-chain alcohol dehydrogenase of unknown specificity # Organism: Mycobacterium tuberculosis CDC1551 # 3 242 9 246 251 218 53.0 1e-56 MTKTAVVTGASSGIGAATARALAGDSWHVICAARRVERIEPLSAEIGGQAVVCDVTSDES VTNLVKTVGGKVDLLVNNAGGAVGQEPVTEADLNAWTTMYQTNVLGMGQVTKALLPALEI AEGTIITITSTAAEWGYEGGAGYCAAKSGERAVVEALRLELCGHPVRVCEVSPGMVHTEE FSLVRFHGDQAKADKVYQGVDSPLVAADIAECVRWISGLPSHVNIDRMIVRPRAQAAQYK VARES >gi|302034490|gb|GL383261.1| GENE 129 121398 - 123071 1379 557 aa, chain - ## HITS:1 COG:Cgl1887 KEGG:ns NR:ns ## COG: Cgl1887 COG1080 # Protein_GI_number: 19553137 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) # Organism: Corynebacterium glutamicum # 4 552 13 568 568 390 46.0 1e-108 MRTLSGLGVSAGVGQAHALVVSPAPGLPASDPSRGAEADLAKVEAALGKVADRLDERSLH ADPSALAVLQATAMMARDPGLLTSVKSHLSDGHGPAHALWAAFDDFCAQLSAAGGYLAER VTDLRNVRDRAVAVMQGLPEPGVPSFDSPVILVAEDLAPADTATLNPELVRGLITAAGGP TSHTAILASQIGIPAVVRCSEARDIEDGTPLALDGVTGTVLVEPDEASVSELTERANRRA EVLASAPDGDATLTDGERILVLANIGNPSDAPTAKKKGAEGVGLFRTEFLFLDRQDAPTI DEQTEAYATVLKTFDEGAKVVFRTLDAGADKPLAFANLGAEENPALGRRGLRLSQVRTDL IDAQLEALAKAAEQTGRDPYVMAPMVATKAEAEWFSSRARAAGIKTVGIMVEVPSTALRS SQVLEPVDFASIGTNDLTQYAMAADRLQGELAELLTPWQPAVIQLVKATCDGAGERLIGV CGEAAGDPLLALVLVGVGIRSLSMAAGKITAVKAALSRHNLEQCRRIADAALAACSPEEA RTAALKLADPSVEVLVS >gi|302034490|gb|GL383261.1| GENE 130 123076 - 123342 278 88 aa, chain - ## HITS:1 COG:PA4466 KEGG:ns NR:ns ## COG: PA4466 COG1925 # Protein_GI_number: 15599662 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, HPr-related proteins # Organism: Pseudomonas aeruginosa # 1 79 1 79 90 61 45.0 3e-10 MPSRTTTIAAESGLHARPAAMFVQAASKSGLAVKIGRPGEEPVDARSILSVMGLGAKHGE TVELTAEGDNADEVLDALVANLQTDPEA >gi|302034490|gb|GL383261.1| GENE 131 123438 - 124241 223 267 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 [Bacillus selenitireducens MLS10] # 8 233 3 225 234 90 32 7e-17 MVDEHTPPVVAVVVAAGMGTRFGGSVPKQVTSLTGKAVVAVAVESLAAGGCDEAVVVVKE GMHNHLQLALAASPIPVHFVTGGNTRQESVRNGLRFIAQHHRLSDATTVLIHDAVRPLVP AYVVENVIAAVENGAVAVTPVVDVVDTIRQVDGDTSSVVDRSTLRAVQTPQGFKRAIITE CHEQLSIEGGSVTDDISCCERYGHHATLVEGSRMSLKITEPVDLDIAEVFAKAAAGAGHH SGRRIGRMLRAAKPSTVVRKLGHGSRR >gi|302034490|gb|GL383261.1| GENE 132 124241 - 124744 266 167 aa, chain + ## HITS:1 COG:MT3687 KEGG:ns NR:ns ## COG: MT3687 COG0245 # Protein_GI_number: 15843194 # Func_class: I Lipid transport and metabolism # Function: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase # Organism: Mycobacterium tuberculosis CDC1551 # 4 154 6 155 159 162 60.0 4e-40 MEIRTGIGTDVHQLSAGVPMHVAGLSFPDERVGLVGHSDGDVACHAICDALLSATGLGDI GSVFGTADPQWAGAAGADLVGHVVALIAGKGWTVQNVAVQVIGQRPRMAARRAEAETALA QTVGAPVSVSATTTDHLGFTGRGEGVAAVASALVTRGLKSEDNSLIR >gi|302034490|gb|GL383261.1| GENE 133 124691 - 125095 387 134 aa, chain - ## HITS:1 COG:PM1969 KEGG:ns NR:ns ## COG: PM1969 COG3731 # Protein_GI_number: 15603834 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system sorbitol-specific component IIA # Organism: Pasteurella multocida # 7 117 3 108 123 72 32.0 2e-13 MATTSSTLWNAVVLRIGKGAQDMLDTGVIVLFGEPVPDALSDICVVHNRGGRSPLTPQRE LLPGDVLNFAGTRYTIDEVGEAATSNLSDLGHVALYFNSPDQSLLAGAIKVSGPPPQLPD QGVILTFEPSSDKG >gi|302034490|gb|GL383261.1| GENE 134 125333 - 125575 162 80 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3397 NR:ns ## KEGG: HMPREF0675_3397 # Name: not_defined # Def: PTS system, lactose/cellobiose specific IIB subunit # Organism: P.acnes_SK137 # Pathway: Galactose metabolism [PATH:pak00052]; Phosphotransferase system (PTS) [PATH:pak02060] # 1 80 18 97 97 142 96.0 5e-33 MQVANKLQRLLRERGINARMEHCHVAEVPRVAERFSPDVIVSTTAVKQPTENVKMFRGVA FLTGVDEGQLADEIANALKS >gi|302034490|gb|GL383261.1| GENE 135 125659 - 126144 555 161 aa, chain - ## HITS:1 COG:ML0320 KEGG:ns NR:ns ## COG: ML0320 COG1329 # Protein_GI_number: 15827084 # Func_class: K Transcription # Function: Transcriptional regulators, similar to M. xanthus CarD # Organism: Mycobacterium leprae # 1 161 4 163 165 206 70.0 2e-53 MTFNVGETVVYPNHGAAVIEDIETRTIKGEEKLYLVLRILGQNDLVVRVPASNLDLVGVR DVVDDEGLENVFEVLRKTNVEEPSNWSRRYKANLEKLHSGNVLKVAEVVRDLWRRERDRG LSAGEKRMLSKARQILVSELALAKKVADDRAEEMLDEVLAS >gi|302034490|gb|GL383261.1| GENE 136 126329 - 126889 462 186 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3399 NR:ns ## KEGG: HMPREF0675_3399 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 186 1 186 186 309 99.0 4e-83 MDADSAKLNDDMRPGRGDSTMIDRRRTTAVLAAVGVLGVVACGADPKVLTSYTPAAGVNG KSDTVKVQNLVLINGGGQARVSAAVVSRKDDKIVGITGEPLTSNNSLSGRSFTMRTVNVK LPAQTSVNLTQSKLQVPVEGLSNGLLAKVTIKFANSAPVTLDAPVVSSTHPDFAEYAPSG IPSARS >gi|302034490|gb|GL383261.1| GENE 137 126942 - 127622 611 226 aa, chain - ## HITS:1 COG:MT0510 KEGG:ns NR:ns ## COG: MT0510 COG0745 # Protein_GI_number: 15839882 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Mycobacterium tuberculosis CDC1551 # 1 226 4 230 230 291 68.0 1e-78 MTRVLIIEDEESYREATAFMLRKEGFEVNTAANGADGLEIYSHNGADIVLLDLMMPGLPG TEVCRQLRQRGNVGIIMVTARDSEIDKVVGLELGADDYVTKPFSHRELVARIRAVTRRGG PEIEVSPDVLEESGVRMDVERHEVSVGGTAVRLALKEFDLLEVLLRNAGRVMTRASLIDR VWGADYVGDTKTLDVHIKRLRAKIEDDPSRPVRIITVRGLGYKFQA >gi|302034490|gb|GL383261.1| GENE 138 127619 - 128785 671 388 aa, chain - ## HITS:1 COG:MT0509 KEGG:ns NR:ns ## COG: MT0509 COG0642 # Protein_GI_number: 15839881 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Mycobacterium tuberculosis CDC1551 # 2 388 12 392 410 221 41.0 2e-57 MILSAIIGAVVGAGLTVLVSRVVESSRHPVDTLATDIEAIEVDSALARALDLTTEAAVIV GPHDEVLHTTLGARSMELVRGSRIADEALLKLVRTARREGRDIVDTMEMKRASTGADLIL TVRVGPLDDHGNAVISASDSSRHVRLAETRRDFVANVSHELKTPIGAVSILAEAIEGAAD DPEAVRHFSQRLTAESSRLSALVTQIIDLSRLQADEPLLRAEPVAVADAIDEAVSRHREQ AANREVSLVVRCDDDLWVLGDQSQLTEAVANLVHNAIVYSEPKARVVVSARRVRDVDTDV IAIAVADNGIGISEADQKRIFERFYRVDYSRSRENGGTGLGLSLVKHTCQAHGGSVDVWS KLGQGSTFTLRLPTLDVDHHNESNQEES >gi|302034490|gb|GL383261.1| GENE 139 128961 - 129629 639 222 aa, chain + ## HITS:1 COG:MT0843 KEGG:ns NR:ns ## COG: MT0843 COG0704 # Protein_GI_number: 15840234 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate uptake regulator # Organism: Mycobacterium tuberculosis CDC1551 # 1 213 1 213 213 170 46.0 2e-42 MRESYHDELNATSGRILTMAELVRVAVKDATAALIGADLTTAERVISDDSKVDSLNEEIE RRCFDLLARQAPVAGELRTIVAMLRMCYELARMGDLAAHVAKIARLRFPEVAVPPQVADQ FVEMSKIADSMIGKAEKTLADRDAEAAESLASEDSKMDDLRRDQFRLLLGDDWTYGVESA VDTALLGRYYERIADHAVAVGSRVIYIVTGEGPAGEDWPSAY >gi|302034490|gb|GL383261.1| GENE 140 129775 - 130845 851 356 aa, chain + ## HITS:1 COG:CAC0090 KEGG:ns NR:ns ## COG: CAC0090 COG0726 # Protein_GI_number: 15893386 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Clostridium acetobutylicum # 152 355 87 292 293 137 37.0 5e-32 MAFAFRSKTIAGAVVVVTTVSMAIAGCASSDPESASSSSKSGVSSAQSSSQPSPSKSPIA KPSISSGASAPAGLPSGPVPAGVFGVGAAVTKPACAEPPSNYSPLKVPGTVVKDIDGLEA GTNHGRAADKYVYSASVVNQWLEKPSTQPKNKKIVFVTFDDGPTTKFTGEQLDNLEKAGA RATFFMIPPQMRDVGKNMLSRSLKMGNALAIHSYSHDYKYLYHGSAANKAKHISCDWDWA MAQSRAILGSNYFSSAFRYPGGHMSWTNLSQADATLAKRGVGWIDWNAMSGDADAQRPTT VPGYLQMVKKSIKESNNPNVVVILNHDTYGKQMTAKAMPSILAWLKSQGYEFGVIA >gi|302034490|gb|GL383261.1| GENE 141 130937 - 131686 822 249 aa, chain - ## HITS:1 COG:MT0508 KEGG:ns NR:ns ## COG: MT0508 COG0588 # Protein_GI_number: 15839880 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglycerate mutase 1 # Organism: Mycobacterium tuberculosis CDC1551 # 2 234 4 234 249 330 67.0 2e-90 MTAKLILLRHGESEWNSKNLFTGWVDVDLNEKGEGEARHAADLLKQENLLPDIVHTSLLR RAIHTAYLALDGCDRHWIPVHRSWRLNERHYGALQGLNKAETKEKYGNDQFMAWRRSYDV RPPDLDRDSEFSQFHDPRYADIPASERPVAECLKDVVARMVPYFTSDIAADLKDGKTVLV AAHGNSLRALVKHLDEISDEDIAGLNIPTGIPLFYELDDNLKPVTRGGRYLDPEAAAAGA KAVANQGNK >gi|302034490|gb|GL383261.1| GENE 142 131811 - 132269 374 152 aa, chain - ## HITS:1 COG:lin0503 KEGG:ns NR:ns ## COG: lin0503 COG1762 # Protein_GI_number: 16799578 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Listeria innocua # 15 151 19 149 155 71 34.0 6e-13 MPTPRLIVADVTATSQNDLYAQVNDRLTADNMVKSTFLNAVSAREKKFPTGLDFGYVSIA IPHIDPEHVISPGLLVCRNSASTTFHAMDDPERNLDVQLSIWPLVTDPGNQIDMLEAVIT LIQDESSYRILLHGSHAEVANTLPDVLATVED >gi|302034490|gb|GL383261.1| GENE 143 132514 - 132807 330 97 aa, chain - ## HITS:1 COG:lin0507 KEGG:ns NR:ns ## COG: lin0507 COG3414 # Protein_GI_number: 16799582 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIB component # Organism: Listeria innocua # 1 96 1 96 97 59 34.0 2e-09 MVNKKVLVCCGTGIATSVQVANKLQRMLRDRGITATMKECKTANVPAQMTTFQPDAIVVT TAITPPDEEIKVYRGTPLLTGVDAEELADQIASDLKA >gi|302034490|gb|GL383261.1| GENE 144 133014 - 134006 876 330 aa, chain - ## HITS:1 COG:ECs2474 KEGG:ns NR:ns ## COG: ECs2474 COG0252 # Protein_GI_number: 15831728 # Func_class: E Amino acid transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D # Organism: Escherichia coli O157:H7 # 4 329 7 335 338 203 36.0 5e-52 MQTHVLYTGGTLGMVSTPNGLAPGADLTGWLNQLLSGTELAGTFETLSFEHLIDSANATP DDWRRIVDDLWEHRDDADSFVVLHGTDTLAYTSAALSYALTEFGKPVVVTGAQYSLGVVG TDAAPNVTGALRAATSGRLNGVAVFFGHKLLRGNRVTKLSSWAYNGFDSPAVPQLARTGA PWQWVENESTGCGWLNPGPYQRHDVLVVDLSPGISARRLRAVLDPLPEAVILRAFGVGNI PSDEPGVVDAILDVISAGTPVVVASQCMQADVQLGQYQSSHALTEGGAVSAHDMTLEALY AKLVFLLSQGLHGKELKRWIETDIAGEISV >gi|302034490|gb|GL383261.1| GENE 145 134010 - 135458 1130 482 aa, chain - ## HITS:1 COG:YPO1937 KEGG:ns NR:ns ## COG: YPO1937 COG1113 # Protein_GI_number: 16122183 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Yersinia pestis # 15 464 18 468 508 468 52.0 1e-132 MQEGDSVTPHTSTTVDKGDAGYDKALKNRHLQMIAIGGSIGTGLFLGTGGRLAQGGPGLA ISYAVCGIFAFLMVRALGEMAIRRPSSGAFVSYAREFMGEKGAYATGWFFFLDWSVTVMA DITAVALYLHYWTPLRAIPQWVLALIALGVVFTLNMLSVKMFGEAEFWFAAIKVAAIILF MIAAIWAIVTGARVGNYTAGLHNIAQHGGFFPAGLAPVFALTLGVIFAFGGTEMVGVAAG ETKDASKILPKAINSMILRIFVFYVGSIILMALVLPYTAYSSNESPFVTFFTGIGIPYAG DIIQVIVLTAALSSLNAGLYSTGRTLRSLAVAGEAPKAAAKLNRHHVPSGGIAMTAALGL LGVALNAFLPDSAFEIVMNLAGIGIAGTWAMVLLAHTRFVSAVRRGKDNRPEYRMPGAPV TNYISLAFLLIVVLSNVTSESGRWTLALFALVAIAMVAGWYAVRNSIKPDLLDNVVPSDE GM >gi|302034490|gb|GL383261.1| GENE 146 135503 - 135724 120 73 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGRRFLVAALFLRSCGSLTLILRPRQPGDETPQSSISSDGALSHAHADNSTGPLVSDPFV KILIFGAEWPLRG >gi|302034490|gb|GL383261.1| GENE 147 135834 - 137309 1525 491 aa, chain - ## HITS:1 COG:TP0329 KEGG:ns NR:ns ## COG: TP0329 COG0112 # Protein_GI_number: 15639320 # Func_class: E Amino acid transport and metabolism # Function: Glycine/serine hydroxymethyltransferase # Organism: Treponema pallidum # 21 489 24 491 574 522 56.0 1e-148 MSDPRAVDPTARDIAEKLAPAYRTMLDAIAQVEPRIAEATRAELTDQRHSLKLIASENYA SLPVLATMGTWFSDKYAEGTAGHRFYAGCQNVDTVETIAAEHACALFGAEHAYVQPHSGI DANLTAYWTILAHHIETPALSEFGARTVNDLTQVDWDTLRHRFNDQRAIGMSLDAGGHLT HGFRPNISGKMFDQRSYGTDPQTGLLDYDKVAELAREFKPLVIVAGYSAYPRRVNFAKMR EIADEVGAVLMVDMAHFAGLVAGKVFTGDENPIPHAQVVTTTTHKSLRGPRGGMVLTTKD YADDVDRGCPMVLGGPLSHVMAAKAVALAEARTQTFRDYAQRVANNAKALAEGLMKRGVK LVTDGTDNHINLLDVTTSFGLTGRQAEAALLDAGVVTNRNSIPTDPNGAWYTSGIRIGTP ALTSRGFGPDEFDQVAELIVTTLEATTPMTASTGKPGKAKYQIADGVAQKVHDAADELLG NFPLYPGLDLA >gi|302034490|gb|GL383261.1| GENE 148 137423 - 138529 862 368 aa, chain - ## HITS:1 COG:CC1496 KEGG:ns NR:ns ## COG: CC1496 COG0524 # Protein_GI_number: 16125743 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Caulobacter vibrioides # 3 368 4 368 368 407 56.0 1e-113 MTNPVTLRPADQCCYDIVSLGEVMLRLDPGERRIRTARSFDAWEGGGEYNVSRGLSRVFG KHAAVITSLVDDPVGHLVGDLITAGGVDDQFITWVPSDGVGRTVRTGLNFTERGFGVRGA VGVSDRGHSAASQLRAEDIDVDRLFGQLGVRWLHTGGIYAALSQSSAQTAKAVMAAAHAN GTVISYDLNYRPSLWKSIGGQEEAHRVNRELARLVDVMIGNEEDFTACLGFEVEGNDENL SHLDVNSYATMIDKVIEKFPNISVVATTLRQVRTASRNDWSAIAWSKDTGLVRSVERPNL EILDRVGGGDSFAAGLVAGLMETGDLQKAVELGAAHGALAMTTPGDTSMVTRCEVESLAA GGSARVKR >gi|302034490|gb|GL383261.1| GENE 149 138526 - 139173 494 215 aa, chain - ## HITS:1 COG:STM1884 KEGG:ns NR:ns ## COG: STM1884 COG0800 # Protein_GI_number: 16765226 # Func_class: G Carbohydrate transport and metabolism # Function: 2-keto-3-deoxy-6-phosphogluconate aldolase # Organism: Salmonella typhimurium LT2 # 14 207 17 211 213 151 43.0 1e-36 MSNEALNTVLSHLVIPVVVIHDAATTPAVTDGLVVGGLPVAEVTFRTDAAPAAIESMAGD GRITVGAGTVINARQVDEAVSAGASFVVSPGLSREVVDRCRHHAIPVLPGAITPTEIMAG IDMGLDTFKFFPAGTFGGAATIASLEGPFPHLRFVPTGGVKPHNLADFLSRANIPAVGGT WLTPADAVAARDCHTIANLVREAVDSAHHIVKEQS >gi|302034490|gb|GL383261.1| GENE 150 139586 - 139723 83 45 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313765535|gb|EFS36899.1| ## NR: gi|313765535|gb|EFS36899.1| hypothetical protein HMPREF9567_00251 [Propionibacterium acnes HL013PA1] hypothetical protein HMPREF9574_00911 [Propionibacterium acnes HL074PA1] hypothetical protein HMPREF9575_01158 [Propionibacterium acnes HL110PA1] hypothetical protein HMPREF9576_00942 [Propionibacterium acnes HL110PA2] hypothetical protein HMPREF9580_02273 [Propionibacterium acnes HL087PA2] hypothetical protein HMPREF9585_01123 [Propionibacterium acnes HL083PA1] hypothetical protein HMPREF9587_00207 [Propionibacterium acnes HL025PA1] hypothetical protein HMPREF9589_01961 [Propionibacterium acnes HL059PA1] hypothetical protein HMPREF9593_02435 [Propionibacterium acnes HL046PA2] hypothetical protein HMPREF9604_00448 [Propionibacterium acnes HL036PA1] hypothetical protein HMPREF9605_00502 [Propionibacterium acnes HL036PA2] hypothetical protein HMPREF9611_00890 [Propionibacterium acnes HL063PA1] hypothetical protein HMPREF9612_01223 [Propionibacterium acnes HL063PA2] hypothetical protein HMPREF9616_00623 [Propionibacterium acnes HL007PA1] hypothetical protein HMPREF9617_00534 [Propionibacterium acnes HL056PA1] hypothetical protein HMPREF9591_00180 [Propionibacterium acnes HL086PA1] hypothetical protein HMPREF9597_00917 [Propionibacterium acnes HL005PA4] hypothetical protein HMPREF9598_02429 [Propionibacterium acnes HL050PA1] hypothetical protein HMPREF9600_00503 [Propionibacterium acnes HL050PA3] hypothetical protein HMPREF9606_00415 [Propionibacterium acnes HL036PA3] hypothetical protein HMPREF9608_01428 [Propionibacterium acnes HL067PA1] hypothetical protein HMPREF9609_02039 [Propionibacterium acnes HL027PA1] hypothetical protein HMPREF9613_00775 [Propionibacterium acnes HL002PA1] hypothetical protein HMPREF9614_01050 [Propionibacterium acnes HL002PA2] hypothetical protein HMPREF9618_00430 [Propionibacterium acnes HL082PA1] hypothetical protein HMPREF9620_00459 [Propionibacterium acnes HL037PA1] hypothetical protein HMPREF9564_00831 [Propionibacterium acnes HL053PA1] hypothetical protein HMPREF9566_00894 [Propionibacterium acnes HL045PA1] hypothetical protein HMPREF9573_00248 [Propionibacterium acnes HL072PA2] hypothetical protein HMPREF9594_00328 [Propionibacterium acnes HL005PA1] hypothetical protein HMPREF9595_01146 [Propionibacterium acnes HL005PA2] hypothetical protein HMPREF9565_01165 [Propionibacterium acnes HL053PA2] hypothetical protein HMPREF9569_00487 [Propionibacterium acnes HL078PA1] hypothetical protein HMPREF9610_02408 [Propionibacterium acnes HL027PA2] hypothetical protein HMPREF9615_01317 [Propionibacterium acnes HL002PA3] hypothetical protein HMPREF9572_02073 [Propionibacterium acnes HL072PA1] hypothetical protein HMPREF9583_00425 [Propionibacterium acnes HL038PA1] hypothetical protein HMPREF9590_02047 [Propionibacterium acnes HL059PA2] hypothetical protein HMPREF9592_01440 [Propionibacterium acnes HL046PA1] hypothetical protein HMPREF9602_00839 [Propionibacterium acnes HL030PA2] hypothetical protein HMPREF9338_00814 [Propionibacterium acnes HL096PA2] hypothetical protein HMPREF9337_00584 [Propionibacterium acnes HL096PA3] hypothetical protein HMPREF9344_00818 [Propionibacterium acnes HL097PA1] hypothetical protein HMPREF9568_01318 [Propionibacterium acnes HL013PA2] hypothetical protein HMPREF9570_01455 [Propionibacterium acnes HL043PA1] hypothetical protein HMPREF9571_00359 [Propionibacterium acnes HL043PA2] hypothetical protein HMPREF9581_00818 [Propionibacterium acnes HL087PA3] hypothetical protein HMPREF9586_01095 [Propionibacterium acnes HL083PA2] hypothetical protein HMPREF9584_00206 [Propionibacterium acnes HL092PA1] hypothetical protein HMPREF9579_00901 [Propionibacterium acnes HL087PA1] hypothetical protein HMPREF9588_01433 [Propionibacterium acnes HL025PA2] hypothetical protein HMPREF9563_00202 [Propionibacterium acnes HL020PA1] hypothetical protein HMPREF9343_00489 [Propionibacterium acnes HL099PA1] # 1 45 1 45 45 83 100.0 5e-15 MTRPCVVLSVLDRYKPMSFTVEAMERLGELAELQIDPDPQFHASA >gi|302034490|gb|GL383261.1| GENE 151 139733 - 139882 87 49 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313765534|gb|EFS36898.1| ## NR: gi|313765534|gb|EFS36898.1| hypothetical protein HMPREF9567_00250 [Propionibacterium acnes HL013PA1] hypothetical protein HMPREF9574_00912 [Propionibacterium acnes HL074PA1] hypothetical protein HMPREF9575_01157 [Propionibacterium acnes HL110PA1] hypothetical protein HMPREF9576_00943 [Propionibacterium acnes HL110PA2] hypothetical protein HMPREF9580_02274 [Propionibacterium acnes HL087PA2] hypothetical protein HMPREF9585_01124 [Propionibacterium acnes HL083PA1] hypothetical protein HMPREF9589_01962 [Propionibacterium acnes HL059PA1] hypothetical protein HMPREF9593_02436 [Propionibacterium acnes HL046PA2] hypothetical protein HMPREF9604_00447 [Propionibacterium acnes HL036PA1] hypothetical protein HMPREF9605_00503 [Propionibacterium acnes HL036PA2] hypothetical protein HMPREF9611_00891 [Propionibacterium acnes HL063PA1] hypothetical protein HMPREF9612_01224 [Propionibacterium acnes HL063PA2] hypothetical protein HMPREF9616_00624 [Propionibacterium acnes HL007PA1] hypothetical protein HMPREF9617_00533 [Propionibacterium acnes HL056PA1] hypothetical protein HMPREF9591_00181 [Propionibacterium acnes HL086PA1] hypothetical protein HMPREF9597_00918 [Propionibacterium acnes HL005PA4] hypothetical protein HMPREF9598_02430 [Propionibacterium acnes HL050PA1] hypothetical protein HMPREF9600_00504 [Propionibacterium acnes HL050PA3] hypothetical protein HMPREF9606_00414 [Propionibacterium acnes HL036PA3] hypothetical protein HMPREF9608_01427 [Propionibacterium acnes HL067PA1] hypothetical protein HMPREF9609_02040 [Propionibacterium acnes HL027PA1] hypothetical protein HMPREF9613_00776 [Propionibacterium acnes HL002PA1] hypothetical protein HMPREF9614_01051 [Propionibacterium acnes HL002PA2] hypothetical protein HMPREF9618_00429 [Propionibacterium acnes HL082PA1] hypothetical protein HMPREF9620_00458 [Propionibacterium acnes HL037PA1] hypothetical protein HMPREF9564_00830 [Propionibacterium acnes HL053PA1] hypothetical protein HMPREF9566_00895 [Propionibacterium acnes HL045PA1] hypothetical protein HMPREF9573_00247 [Propionibacterium acnes HL072PA2] hypothetical protein HMPREF9594_00327 [Propionibacterium acnes HL005PA1] hypothetical protein HMPREF9595_01145 [Propionibacterium acnes HL005PA2] hypothetical protein HMPREF9596_01998 [Propionibacterium acnes HL005PA3] hypothetical protein HMPREF9565_01166 [Propionibacterium acnes HL053PA2] hypothetical protein HMPREF9569_00486 [Propionibacterium acnes HL078PA1] hypothetical protein HMPREF9610_02409 [Propionibacterium acnes HL027PA2] hypothetical protein HMPREF9615_01318 [Propionibacterium acnes HL002PA3] hypothetical protein HMPREF9572_02074 [Propionibacterium acnes HL072PA1] hypothetical protein HMPREF9583_00424 [Propionibacterium acnes HL038PA1] hypothetical protein HMPREF9590_02046 [Propionibacterium acnes HL059PA2] hypothetical protein HMPREF9592_01441 [Propionibacterium acnes HL046PA1] hypothetical protein HMPREF9602_00838 [Propionibacterium acnes HL030PA2] hypothetical protein HMPREF9338_00815 [Propionibacterium acnes HL096PA2] hypothetical protein HMPREF9337_00585 [Propionibacterium acnes HL096PA3] hypothetical protein HMPREF9344_00819 [Propionibacterium acnes HL097PA1] hypothetical protein HMPREF9568_01317 [Propionibacterium acnes HL013PA2] hypothetical protein HMPREF9570_01454 [Propionibacterium acnes HL043PA1] hypothetical protein HMPREF9571_00360 [Propionibacterium acnes HL043PA2] hypothetical protein HMPREF9581_00819 [Propionibacterium acnes HL087PA3] hypothetical protein HMPREF9586_01096 [Propionibacterium acnes HL083PA2] hypothetical protein HMPREF9584_00205 [Propionibacterium acnes HL092PA1] hypothetical protein HMPREF9579_00902 [Propionibacterium acnes HL087PA1] hypothetical protein HMPREF9588_01434 [Propionibacterium acnes HL025PA2] hypothetical protein HMPREF9563_00201 [Propionibacterium acnes HL020PA1] hypothetical protein HMPREF9343_00490 [Propionibacterium acnes HL099PA1] hypothetical protein PAZ_c03900 [Propionibacterium acnes 266] # 1 49 1 49 49 87 100.0 4e-16 MLKDAEVVVTAWETGELTDLLDYTPRLQMVIHSGARSRMLLECRTTSEG >gi|302034490|gb|GL383261.1| GENE 152 140202 - 140390 166 62 aa, chain + ## HITS:1 COG:AGl3399 KEGG:ns NR:ns ## COG: AGl3399 COG0111 # Protein_GI_number: 15891817 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 62 210 271 338 71 51.0 5e-13 MRTCDVVSLHSASTPRTYHMLGAEDFATMEDGAAFINTARGAICGQDALIAELQRDRINA IM >gi|302034490|gb|GL383261.1| GENE 153 140377 - 140538 61 53 aa, chain + ## HITS:1 COG:no KEGG:PPA0379 NR:ns ## KEGG: PPA0379 # Name: not_defined # Def: putative dehydrogenase # Organism: P.acnes # Pathway: not_defined # 5 46 35 76 101 72 80.0 4e-12 MPSCDVTDPEANVPDSPLWTLPNIMLTPYAAGSVGKELRRLGDGAVTTWPATS >gi|302034490|gb|GL383261.1| GENE 154 140618 - 143098 1457 826 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3415 NR:ns ## KEGG: HMPREF0675_3415 # Name: not_defined # Def: hyaluronate lyase # Organism: P.acnes_SK137 # Pathway: not_defined # 1 826 1 826 826 1565 100.0 0 MFDIPYQVPSRRTFLSLSALSAIAIAASPEMPDAFASPDPDIWSALCEKWTDIITGRNAA KTADPRARAIIAKTDKRVATILTDLASSSSRTTVLLSANLQKEESSFITTTARAISSIAC AWATPGSAYHAEPHVLSACIDALKDFCRLRYHPSQDEYGNWWDWEDGASRAIGDVMCILH DALPTDVMAAAAAGIDHFVPDPWYQQPESVKPTAHPTQPVISTGANRMDLTRAVICRSIA TGDESKLRHAVQGLPDSWRTVAEGDGFRADGGFIQHSHVPYTGSYGDVLLSGLAMLLPLV AGTRFDITDSAQANLLSQVERGIVPVMYGGQILDCVRGRSISRIDEPAAMHGMSIARSML LMANAIPAHRAELWRGTVHGWMTRNTFDHLSEPASLRDIDLFDTAANVRPIPESSTPTYF ASIDRLVHRTPNWLIAVSNCSNRISWYEYGNSENEWASRTSQGMRYLMLPEDMGQYEDGF WATVDYSAPTGTTVDSTPLKRAVGTAWAERTPDNEWSGGLASGEWSAAASQITSQDSTLK ARRLWVGLKDALLELTTDVSTDASKATTVVEHRKVGKTPPELLVDGITITSKTSFDNPHW AHLRGVGGYVFATDVDLTAQLEKRKGSWIDVNPARTVKGFNEAIERNYASLHVTHHNRPV AWAVLPTASRSQTMALAQRPVDNLFIVLSNDRMVQAVRSTGCLLTKDPTVVTTYAFWKPA TCAGMTADAPAIIQTQAQGSRVEVIMSEPTQKRPSLTVAIEGVWTVENSSDRISVSRSDK TTTLRINTADLGGQSIRVTLSPALPKPTKPSLRASSYPLGLPHTSS >gi|302034490|gb|GL383261.1| GENE 155 143155 - 143352 68 65 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313793056|gb|EFS41123.1| ## NR: gi|313793056|gb|EFS41123.1| hypothetical protein HMPREF9575_01151 [Propionibacterium acnes HL110PA1] hypothetical protein HMPREF9612_01230 [Propionibacterium acnes HL063PA2] hypothetical protein HMPREF9598_02436 [Propionibacterium acnes HL050PA1] hypothetical protein HMPREF9566_00901 [Propionibacterium acnes HL045PA1] hypothetical protein HMPREF9594_00321 [Propionibacterium acnes HL005PA1] hypothetical protein HMPREF9610_02415 [Propionibacterium acnes HL027PA2] deoxypurine kinase subunit [Propionibacterium acnes HL097PA1] # 1 65 1 65 65 126 100.0 6e-28 MSQGRLRDRGIQESISQFAPVLAFLNSFRSCERSPTVIFEPLLDKVAKCLYRQIDTIGNR FPVIC >gi|302034490|gb|GL383261.1| GENE 156 143477 - 143749 137 90 aa, chain + ## HITS:1 COG:no KEGG:PPA0381 NR:ns ## KEGG: PPA0381 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 53 90 110 147 290 70 81.0 3e-11 MSWRRGGPTASIPNPASVGYAGLSIGRQWSRHVHLLCCFTSPNLGFGNTCPPQTLEQPVE WFQDVRSPQIPDNNWIWFQIIVETFLRGVG >gi|302034490|gb|GL383261.1| GENE 157 143856 - 144080 91 74 aa, chain + ## HITS:1 COG:no KEGG:PPA0381 NR:ns ## KEGG: PPA0381 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 56 188 243 290 84 69.0 2e-15 METLPALWTLLAPDWDVARKFADIHGPRLARYLEGAPYLVGADVGGSRGVAPLIQGVVSY IGGARARPYGQGYS >gi|302034490|gb|GL383261.1| GENE 158 144179 - 145030 408 283 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3416 NR:ns ## KEGG: HMPREF0675_3416 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 283 118 400 400 556 100.0 1e-157 MVWFHEFRPMAQSYSGVGSPYWAAKGMLGLALPPDHPVWTEPEEPIPVEASDIYRIIAVP GWMVSETCQDGIVRVLNIGTDGQDEGELVGEAPLYTSLGFSTATAPPQAGEWKLRSVANV VGLRDGQGQVSARSDQRVERCEYIGEVVVGQSSWLAHWVHDDVDEGAGYGARGIVEIGPK IVCAHACHRGVEVRCVWVEGALCSGVVLMAGWPTDPCDGPESYLEPVTSWSHRERLAGHR VTGLSKLTTVETLKTSLAGGGALYRIGRVRPMRASPTGECKRR >gi|302034490|gb|GL383261.1| GENE 159 145546 - 146502 686 318 aa, chain - ## HITS:1 COG:Cgl2588 KEGG:ns NR:ns ## COG: Cgl2588 COG0566 # Protein_GI_number: 19553838 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylases # Organism: Corynebacterium glutamicum # 1 317 1 312 313 277 51.0 2e-74 MAGNSQRRGGGHKSKSSAVGSGGRGRKALKGRGPTPKAEDRVYHKAYKAKQEKLARAAAR KPANRQSTGAGPEWVIGRNPVLEALHAGLPVRTAYVAEGAEHDSRLRAILTFCADHGIAL MQATRGELDRMTGGSNHQGVALRLPEYEYATVGDLIAAGTQTYRGGLVVALDKVTDPRNL GAIIRSAAAFGAQGVLIPSRRSASMTAAAWKTSAGAAARIPVAMATNLNQALGKFAAAGW MIVGLAGEADSDFASAPGFDGPLVIVVGSEGDGLARLTRQSCDVLASIPISSDVESLNAS VAASIALYEAARMRGAKL >gi|302034490|gb|GL383261.1| GENE 160 146516 - 147988 1030 490 aa, chain - ## HITS:1 COG:ML0323 KEGG:ns NR:ns ## COG: ML0323 COG0215 # Protein_GI_number: 15827087 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Cysteinyl-tRNA synthetase # Organism: Mycobacterium leprae # 17 489 7 463 473 454 50.0 1e-127 MVSDVSGYTGNLSHVTFKLYNTATHGIETFKPLREGQVSIYHCGMTVQSSPHLGHIRKEV VFDVLRRWLECSGYRVTVVANVTDIDDKILAKSAAAGTPWWAHAYHYENELHAAYKALGC RPPTYEPRATGHIPEMIELVKTLIEKGHAYPAPDGSGDVYFDVRSWPRYGELSGMRVDEM SPAEDSDPRGKRDPRDFALWKGHKEDEPETASWVSPWGRGRPGWHLECSAMSGKYLGEAF DIHGGGIDLRFPHHENELAQSAAAGRPFAHYWMHNAWVTMSGEKMSKSLGNTAQVSEVTK TYSPRAVRYFLLAPHYRSMIEFSPSDEGTKGSLDEATKAIERIDSFLDRASNLVGEQVTA SHELSEAFVIAMDDDLGTPQAVAALFSQITEGNKSVSIGDAEATRHHLSQVKAMLAVFGL DPQAPEWADTATGDARLEPVVDGLVQAMLDQRAEARARKDWTTADAIRDTLTNLGLTIED TPTGAHWSLS >gi|302034490|gb|GL383261.1| GENE 161 147995 - 148213 199 72 aa, chain + ## HITS:1 COG:no KEGG:PPA0385 NR:ns ## KEGG: PPA0385 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 72 1 72 72 85 94.0 9e-16 MAEIRKHKPSSSPIARALEAAMGESIKPVVPGSRPDKGVEEPETKLESSPSVAASPAQWG SFTVAMPPKSSD >gi|302034490|gb|GL383261.1| GENE 162 148224 - 149558 923 444 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3421 NR:ns ## KEGG: HMPREF0675_3421 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 444 29 472 472 820 99.0 0 MAQWPQERLVALPRGISRHVVRFITVDDDVYAAKEVVEHLAIHEYRLLHDLMRLDTPSVE PIGVITDRVASNGEPLEPIILTRHLRFSLPYRSLFHSGVRQGTVMRLLDALVVLLVRLHL VGFLWGDISLSNVLFRRDAEAFAAYLVDAETGELHDHLTTGQREHDLQIARTNLYGEFLD LEEGDMLDDALDPLGLVTTIEDRYHDLWNELTAAEEFDGGDYSQVESRVRRLNALGFDVA ELDIQTSPDGQRLRIQPKVVDAGHHQRRLLRLTGLDTEEFQARRLLNDLDTFRARNGLQG VDEAVAAHRWLTECFEPVVQQIPPELSRKRELAQFYHEVLDYRWYESQRQQREVPHVEAA QGYVRDILAKLPDEAISTESVVPVDGSPAHSGHELVNVYDPSLGYVEDEEEDAPYDPWEA HAEAIDVESASRLDIDALRARMKR >gi|302034490|gb|GL383261.1| GENE 163 149894 - 150412 512 172 aa, chain + ## HITS:1 COG:SA1984 KEGG:ns NR:ns ## COG: SA1984 COG1302 # Protein_GI_number: 15927762 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Staphylococcus aureus N315 # 43 151 45 149 169 77 45.0 1e-14 MTDNKTASAKSDATKTENLPETTTKETLPPSPLHTDHGSTLIAEQVVQKIAGIACREVPG VHAMGSTGRRMLSSITDRIPGSTTNVSNGVQVEKGERQCAIDLSVVIEYGYSVVEVANKL RETIIDAVEYGTGLEVVEVNVQVTDVYIQGEDDHDDDQSDQVAGQRKNTELS >gi|302034490|gb|GL383261.1| GENE 164 150424 - 150609 253 61 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3423 NR:ns ## KEGG: HMPREF0675_3423 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 61 1 61 61 73 100.0 2e-12 MNASRIGALVGLLLGVIAVCVGVWQAIVVLVLGLLGLIIGRIIDGQLDVHDIFGKPSQRN R >gi|302034490|gb|GL383261.1| GENE 165 150609 - 151022 204 137 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3424 NR:ns ## KEGG: HMPREF0675_3424 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 137 1 137 137 219 100.0 2e-56 MSAGTTRVRSVPSLAVHNREKASRGTLTVTTAVVEKVAARVAAQSEGFGAPTSSFFGSGS RADFDRGPKVSAVLTGRTADLEVEVAIGYPAPVQAQCDDLRARLTEQVPKMSGVDIRTID ILVSRVVSKAPTMKELT >gi|302034490|gb|GL383261.1| GENE 166 151024 - 151578 377 184 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3425 NR:ns ## KEGG: HMPREF0675_3425 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 184 1 184 184 320 100.0 2e-86 MSKQYVSPPLIRRPSRTLPVTILAVVLLAAGVVAIIAAIQRLQHGSLPQWVAWGRGHMTT ASWLNDTALTVAIVIGVVALLFLIWAFKPGRTSGVFLQPSEGAPDNREIVMDNSDLTGWL SRWLDEEDGVASSVVKRRGKTLKVHAETDVKDPEVMREQLTTRIAARVDSLGLEQPLKVE VRLR >gi|302034490|gb|GL383261.1| GENE 167 151575 - 152291 432 238 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3426 NR:ns ## KEGG: HMPREF0675_3426 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 238 1 238 238 436 100.0 1e-121 MKGRANRTRLAVVGIIGLVVVAWFMLVRFNVVSSWGWRQPKPDAPIVDVPKAWRTDYASW ALLIVGILVAVIGLVWLLRQFSSSNRAHTYGMSHEADHGSTVLSTDALGRAVEEQIEEFP GVSSASVRFFGARVAPEMMVQIDIDDRADVRKLVDRLESEVARDVEATLDAKLVRFGTKL RTGAHVTGMGVSHVGVTEVPNIDDSGDSLPANPMPKSTFLQEKSDRAKPRTREGKVLA >gi|302034490|gb|GL383261.1| GENE 168 152348 - 152923 122 191 aa, chain + ## HITS:1 COG:mll8140 KEGG:ns NR:ns ## COG: mll8140 COG1595 # Protein_GI_number: 13476734 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Mesorhizobium loti # 18 188 4 176 208 78 31.0 8e-15 MVSRVDGHGGDEVILADIRAAQDGDAGAYARIVKSWGGRLLRFCRNNLPATIDAEDVVQD VLLTAWQKLPGLDDRSRFRAWMYTIARNRCREVIRTAGRRATDPVSPEEVAVKIDSRQDP ARAHARDAAMMALRKSVAGLPDTQRSIWVMAQIDGLGYAEIADIEGLPLSTVRGRLARAR ATIAKEMESWR >gi|302034490|gb|GL383261.1| GENE 169 152914 - 153438 245 174 aa, chain + ## HITS:1 COG:no KEGG:PPA0393 NR:ns ## KEGG: PPA0393 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 174 1 174 174 318 99.0 4e-86 MEVKLACGADMNRVWEGATQPLTEHEAECPACQAVRIEALRADQLRDDTVAEDAQTKVVV DPLKLSSVWRSYAADLSPRHCVFDDDGGQVEVRETVLAAIVRNSLADCEDGRLNRIRFSV PHTPLRLRIDLSVARGVRIPDCAERVRHRISTAMTRELGGRPEAIDIIVEDIHV >gi|302034490|gb|GL383261.1| GENE 170 153431 - 153784 285 117 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3429 NR:ns ## KEGG: HMPREF0675_3429 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 117 1 117 117 195 100.0 4e-49 MSELKNDDVVSGTLLTGEHIIDDLAGIIVTTVRNTPGVTRLVKPWWRRIGNDDRSAIRIS EEDGLSEVKVEVTVDLTVPIVQLTQDLRHRVSTAITQSGRTPGKVDIVVSKVEPNNE >gi|302034490|gb|GL383261.1| GENE 171 153850 - 154950 1015 366 aa, chain - ## HITS:1 COG:MT2098 KEGG:ns NR:ns ## COG: MT2098 COG3839 # Protein_GI_number: 15841526 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Mycobacterium tuberculosis CDC1551 # 1 358 1 349 357 436 64.0 1e-122 MATVQYKEATRVYPGTDRAAVSKLDLDIGDGEFMVLVGPSGCGKSTSLRMLAGLEEVNAG SIWIGDRDVTDLPPKDRDIAMVFQNYALYPHMTVADNMGFALKMQNVPKAERQQRVLEAA KLLGLEDFLNRKPKALSGGQRQRVAMGRAIVRNPQVFLMDEPLSNLDAKLRVQTRTQIAA LQQRLGVTTVYVTHDQVEAMTMGDRVAVMRDGVLQQVDSPLALYDTPKNLFVAGFIGSPA MNLMEGDVVDGGVELGDYVVPVSRDVLAKVPNETKLTLGIRPEAFTLASEGIGLDVAVVE ELGADAYLYGSLVGSGKQASIEDGEAHQVVARISSRRPPQRGEQVRLGVDPASVHVFSQE TTERIS >gi|302034490|gb|GL383261.1| GENE 172 155062 - 155289 91 75 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313824245|gb|EFS61959.1| ## NR: gi|313824245|gb|EFS61959.1| conserved domain protein [Propionibacterium acnes HL036PA2] conserved domain protein [Propionibacterium acnes HL050PA1] conserved domain protein [Propionibacterium acnes HL027PA1] conserved domain protein [Propionibacterium acnes HL002PA1] conserved domain protein [Propionibacterium acnes HL037PA1] conserved domain protein [Propionibacterium acnes HL005PA2] conserved domain protein [Propionibacterium acnes HL005PA3] conserved domain protein [Propionibacterium acnes HL053PA2] # 1 75 4 78 78 153 100.0 5e-36 MDTTHKGGPGGEDAAILLVKWRIFRVRGTMNEVLPQSGTGWSSRDVRRGPPLMFFYIAAH WTVDSRLFPCEAGSA >gi|302034490|gb|GL383261.1| GENE 173 155703 - 157226 1148 507 aa, chain - ## HITS:1 COG:PA2443 KEGG:ns NR:ns ## COG: PA2443 COG1760 # Protein_GI_number: 15597639 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Pseudomonas aeruginosa # 32 507 1 458 458 490 54.0 1e-138 MVYSVREPCFTVNRHNLFGQHSSPGFGRIMSVAVSVFDIFKVGIGPSSSHTVGPMRAARI FVTDLAQSPVWPEVTRVRAELFGSLGATGHGHGSEAAVLLGLEGEDPATVDTDQTPARAA SIANDGRITLDAVHGGREISFDVTTDLVLHRNRSLPFHPNGMTFTAWSGQEVVVERTFYS IGGGFVVEHGEDEHPAIVRDSAPVPYPFKTGKELLEQCSDYRMSIPEVAMANEMTLRAEE EIRGQLLDIWAVMHACVERGCSRAGVLPGGLHVRRRAMKMHHDLVTRERITPGKPEPFGS VDWLTVWALAVNEENAAGGRIVTAPTNGAAGIIPSCLHFAVKFLSPGSDIDSGTPGVDTG DDDLIVNYLLAAGAVGEIYQQSASISGAEVGCQGEVGVACSMAAAGLAQVMGGTPTQVCN AAEIGLEHHLGLTCDPVGGLVQIPCIERNALGAIKAVTAARLAMAGDGSQIVSLDQVMKT MMETGRDMKVKYKETARGGLAVNIVEC >gi|302034490|gb|GL383261.1| GENE 174 157077 - 157394 75 105 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|289424404|ref|ZP_06426187.1| ## NR: gi|289424404|ref|ZP_06426187.1| conserved domain protein [Propionibacterium acnes SK187] conserved domain protein [Propionibacterium acnes J165] conserved domain protein [Propionibacterium acnes SK187] conserved domain protein [Propionibacterium acnes J165] conserved domain protein [Propionibacterium acnes HL087PA2] conserved domain protein [Propionibacterium acnes HL059PA1] conserved domain protein [Propionibacterium acnes HL007PA1] conserved domain protein [Propionibacterium acnes HL056PA1] conserved domain protein [Propionibacterium acnes HL086PA1] conserved domain protein [Propionibacterium acnes HL050PA1] conserved domain protein [Propionibacterium acnes HL050PA3] conserved domain protein [Propionibacterium acnes HL002PA2] conserved domain protein [Propionibacterium acnes HL037PA1] conserved domain protein [Propionibacterium acnes HL053PA1] conserved domain protein [Propionibacterium acnes HL072PA2] conserved domain protein [Propionibacterium acnes HL005PA2] conserved domain protein [Propionibacterium acnes HL005PA3] conserved domain protein [Propionibacterium acnes HL027PA2] conserved domain protein [Propionibacterium acnes HL002PA3] conserved domain protein [Propionibacterium acnes HL046PA1] hypothetical protein HMPREF9338_00838 [Propionibacterium acnes HL096PA2] hypothetical protein HMPREF9344_00844 [Propionibacterium acnes HL097PA1] conserved domain protein [Propionibacterium acnes HL013PA2] conserved domain protein [Propionibacterium acnes HL043PA2] conserved domain protein [Propionibacterium acnes HL087PA3] conserved domain protein [Propionibacterium acnes HL083PA2] conserved domain protein [Propionibacterium acnes HL020PA1] hypothetical protein HMPREF9343_00515 [Propionibacterium acnes HL099PA1] # 30 105 1 76 76 153 100.0 3e-36 MRTRRTDADLEDIENADCHRHDSAKPGAGMLSKEVVSVHGEAWFANRIDQGSRTCPWALC TIDDLLGRLTGRGRPCSTYNHSSRMRDANQICSKTLTSVLAGFNM >gi|302034490|gb|GL383261.1| GENE 175 157481 - 159790 1284 769 aa, chain + ## HITS:1 COG:SMc04129 KEGG:ns NR:ns ## COG: SMc04129 COG0673 # Protein_GI_number: 15963876 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Sinorhizobium meliloti # 446 665 73 314 433 95 29.0 3e-19 MTSQERPAGRGQRKDDVLRELRADGALTAAELVERTSLSRPTIISLLRELEEDGWVSSEV GGHGAPGRPATAWAPASRAGIVIGADVLVDSMLTVVSTFHGRVLEVRTDQLVDRCREARL DVVAGVIGEARDRWSEGFGLLRQVAVSTTGVVDGHGTVLRSDLVPQWEGLDLAAALVQRL GVSVSVENDINMAAWGEFCCRRGQSLSSDGDMLLVQMTKGLHTGLVLSGRIHRGRQWNAG EISDVLDLRLEDGQHPDDEWIDRAALTIGSVAGVVNPDLIVVAGPTSRSLDVIRQVIARL HQRRVPGSVPVPAEVAALGRAASVVGAVDVALGHASAAFLGVERPHPVALQGVERIHQEV EKGHHSVMATTRDKRTIEVLRVGVVGVGARSRLALNAELEGNGGAIVAVCEPHHLARRRV ADRLGKDPDSIVITSDVAGLIRAGIDVAFVTSPDDTHVEVTCALLEAGVPVYLEKPLAIT LESATKVLVTAHRTGTKLYVGHNMRHMNVVRSMRDLIRTGRIGEVKAIWCRHFVGAGGDF YFKDWHATREHGTGLLLQKAAHDIDVMHWFAGSHTTDVVGMEGLTLYDQITDRCDHSDEL MGDWYSLDNWPPLSQKGLNPVIDVEDLSMVLMRMESGVYASYQQCHYTPDYWRNYTVIGT EGRIENFGDGEGGVIRLWNTRTHYNAEGDETFPIIGDANGHGDADVLTVTEFLNFVRNGT RTDTSPLGAWYAVAAGIEATESLRSGSTPRMVPSLDAELVEYFNNNQVK >gi|302034490|gb|GL383261.1| GENE 176 159813 - 161105 1101 430 aa, chain + ## HITS:1 COG:lin0220 KEGG:ns NR:ns ## COG: lin0220 COG1653 # Protein_GI_number: 16799297 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Listeria innocua # 53 430 45 416 418 134 29.0 3e-31 MDRRGFIAGAALATLAVAGCSSSKKEAGSGTASIAPDTSAELVLAYWDKNQTRTIKENIK SFNKKYPNVKVTTNLAGYEDYWKKLRTQAQGNELPDVFWMNGPNIQLYAGNGMLAPIDKV TDAGVKWSDYPEALVKLYTYDGKHYGVPKDFDTIGVFYNKKIFKDAGVELPTADWTWDDF HDKAKKISDWGKSKGIYGCATTINGDGQGTYYNTIFQAGGFVIKDDKSGFDDPKSIEGLQ CWADWVKDGSVASPKVITDTKPSQMFKSGKSAMYWSGDWTASELAEEFKGHENDYDVIVL PKKDRKATVIHGLGWVVSARSANQAAALALVAHMGSKQAQETEARNGTAIPAFHGTQDPW VKAFPQWNCKMFVDAATTYAVTYPVSRNTSVWADKEADYVNPAFSGEMPVPETARKLATF MNDALAKEKG >gi|302034490|gb|GL383261.1| GENE 177 161102 - 162058 776 318 aa, chain + ## HITS:1 COG:XF2447 KEGG:ns NR:ns ## COG: XF2447 COG1175 # Protein_GI_number: 15839038 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Xylella fastidiosa 9a5c # 29 313 5 289 293 154 36.0 1e-37 MIHPGTRGDTAVAPLSSRSGHRKKKDPTSVGAWPALFIGPLMLGIAVFYYWPIFENVVAS LKQTNAFGGNPQFVGFENYRELFASPDLRSAIGNTLLYTVIVLLGIPLSVAVAAMIELPG LRFKGLYRILYFMPYLAMPMAVAQVRKIVYNGQFGLLNQILRSVGVSDPPYWLVSPGWAL FAVALFGLWASIGFNVIILSAGLKSIPRELYEAASIDGASAWRQFRMVTVPLLSPSIFFL TIMTTIGGFQLFDALYAMIGTGNPAEPRTRSLVSLFYRQAFVNHDQGLGAAVAIVIFALV AIVTLAQFLGQKRWVNYV >gi|302034490|gb|GL383261.1| GENE 178 162051 - 162941 599 296 aa, chain + ## HITS:1 COG:lin0219 KEGG:ns NR:ns ## COG: lin0219 COG0395 # Protein_GI_number: 16799296 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Listeria innocua # 34 295 20 281 282 196 39.0 6e-50 MSEVSTGSELSAVEVAALAKRGDTVSQRRFVGVHILLLLGGVLMVFPFVYQILMSLSTNM EIQSVPPKLIPDRWQFHNYTEVFTRLPFLKQFGVSVTITVLRTVVQLILCSMGGYAFARM KFGGKSVLFGFVLAILMVPGQSYLIGQYEIIRELGLLETPWGIVLPGFFSAFGVFLMRQS FMSLPAELEEAARLDGCNPWQTFWRVMVPVVKPGLFAVMITTVLWSWNDLLWPLIVTARE EPMPLSVGIATLAGQHSSEFALMMAASVMAMAPIFLLFFSMQRKVIEGLASSGLKG >gi|302034490|gb|GL383261.1| GENE 179 163295 - 164332 855 345 aa, chain + ## HITS:1 COG:DR1662 KEGG:ns NR:ns ## COG: DR1662 COG1063 # Protein_GI_number: 15806665 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Deinococcus radiodurans # 1 342 23 364 370 397 54.0 1e-110 MKALVKTRPEPGLELVEVPDPVAGPNDVIVKVMRTGICGTDVHIDKWDGWAAKTVHTPLV LGHEFCGEIVELGSEVNDLEVGQFVSGEGHYVCGRCRACLAGKRHLCRNTQGIGYAVNGA YCQYFVMPAGNVWVHHIPDLDPDVAAIFDPFGNAVHTALQFPCLAEDVLVSGAGPIGIMA ALVAQFQGARNVVVTDLSDERLELAQQLGLKNAVNVSREGLETVWDRFDMKEGFDIGLEM SGSGTALTSMIDNMTHGGRIALLGTPSTDITLDFSKIIFNMITIQGVTGRQIFETWYTMA SLIRSGLDISGIITDRYPITEFREAFDVAGSGHGGKVVMNWECLD >gi|302034490|gb|GL383261.1| GENE 180 164358 - 165554 1168 398 aa, chain + ## HITS:1 COG:VCA0886 KEGG:ns NR:ns ## COG: VCA0886 COG0156 # Protein_GI_number: 15601641 # Func_class: H Coenzyme transport and metabolism # Function: 7-keto-8-aminopelargonate synthetase and related enzymes # Organism: Vibrio cholerae # 1 398 1 395 397 483 61.0 1e-136 MYGPMKDELSAKIAALKEEGLYKAEAPLTSPQSGKITVDDGREVINLCANNYLGLADSPV LIEAAKKALDEWGFGMASVRFICGTQTLHQKLERAITEFLHPDDPDNWDTILYSSCFDAN GGLFEVLLGPDDAIISDELNHASIIDGVRLCKAQRFRYRNLDMADLEAQLQAAKDCRHIM IATDGVFSMDGFVAPLPQICDLAEKYGAMVMVDDSHAVGFVGEHGAGTPEQWGVRDRVDV LTGTLGKALGGASGGYTCSHREVVEMLRQNSRPYLFSNSLAPSIAGASLATLDLLKSSGD LLTKLRENTEYFRSEMTRRGFEIPESDHPIVPVMVGDAVKAAKMADAMLAKGIYVRAFSY PVVPKGKARIRTQMSAGLTREQLDKAIKAFEEARAEIG >gi|302034490|gb|GL383261.1| GENE 181 165571 - 166479 644 302 aa, chain - ## HITS:1 COG:MT3866 KEGG:ns NR:ns ## COG: MT3866 COG1732 # Protein_GI_number: 15843379 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) # Organism: Mycobacterium tuberculosis CDC1551 # 15 300 52 337 343 165 36.0 1e-40 MTRRTLLGTALLTGLAACSSNDPLNSDGSGSGSADLIVGSANFTESEIIAEVYAQSLETV GITIKRRMQIGARDVYVKALQDGSVNLVPEYSGNLLQFFQGASSASDEKSVMASLRKAVP AGMSVGEPSAAQDADSWCVTTEFSHTHKVTSLTDLATLDSLKVGGNPELKERPYGPKGLT KAYGVPSSIVKFTALSDSSGPLTVKALTSGTVDLVDLYTTTPAIKEQHLVVLSDPRHLIV PQNVVPLLSKKVDDKARAQLARVSKALTTDDLIGMNQRFQGDEKASAATIAKDWLAQRGL AS >gi|302034490|gb|GL383261.1| GENE 182 166516 - 167211 597 231 aa, chain - ## HITS:1 COG:MT3863 KEGG:ns NR:ns ## COG: MT3863 COG1174 # Protein_GI_number: 15843376 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport systems, permease component # Organism: Mycobacterium tuberculosis CDC1551 # 1 212 1 208 239 131 47.0 1e-30 MNHIAAALTWLTTSSHWAGSGSIGVRIGEHLWYTLLALTIAAITAIPAGLAIGHTGRGKT IAVACSGALRALPSLGLLTLLAISTTIGIENPVVPSTIVLAILAIPPLLAGSYSGVDAID DEVADGARACGMTEMQVLGRVELPLATPLLLGGLRSAALQVIATTTICSYLGMGGLGRFI LDGLAVSDYPQMLAGSIVIIVLALVVDGLLCLVTRLLTGPGVRHALALTPQ >gi|302034490|gb|GL383261.1| GENE 183 167208 - 167774 389 188 aa, chain - ## HITS:1 COG:MT3864 KEGG:ns NR:ns ## COG: MT3864 COG1174 # Protein_GI_number: 15843377 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport systems, permease component # Organism: Mycobacterium tuberculosis CDC1551 # 1 182 26 207 229 135 47.0 6e-32 MLLSLLLSVPLGWWAHRARTARRILVPGASVLYALPSLPLFVLLPLILGTKILDPINVVV ALTLYGIALLVRTATDAFDSVGRSVRRDAVAIGHSDSQVFWRVALPLAVPALVAGMRVVS ASTLSLVSVGALVGVPSLGYFFTDGYQRSFPTEIWVGIIGTLVLAIIFDLVIVCVGRLLT PWRRAATI >gi|302034490|gb|GL383261.1| GENE 184 167852 - 168688 360 278 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 237 1 239 245 143 36 9e-33 MIRFDHVSKRFDDGTVAVDNFELTVESHHLVVLLGSSGCGKTTLLRMVNRMVDPSEGRIL IDDTDVATVNPVKLRRQIGYVMQSGGLLPHRTVVDNIAAVPLLSGVSRTAARTRAMDLLE RVGLDSSLARRYPTQLSGGQRQRVGVARALAANPDILLMDEPFGAVDPVVRTELQQGLLQ IQADLAKTIVFVTHDVDEAFLLGDEVLVLRREAQVAQRGRPDDVLLHPIDDFVSSFIGGD RRNLHMERHDDHPTIVDAGGRLVGRFANQPSTTVRENS >gi|302034490|gb|GL383261.1| GENE 185 168850 - 169638 772 262 aa, chain + ## HITS:1 COG:no KEGG:PPA0408 NR:ns ## KEGG: PPA0408 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 262 5 266 266 425 100.0 1e-118 MSTAAAGEKDSFAVAATSLAVAEDELARSSTGTESSAEEEWWKAEGMPWNHKPGRSDYWC MGWIGFLGIFSLAMLPLRGWLLGLDPPILMGLTGSRTGAAATGALASVGQAPYWLWWLLL GSIMSIKLDWVYWWAGKLWGRGMIEVWAGRSERAHRRYDQAEKWARKLGWLGVLVAYVPI PLPIMPVVFVLTGASGMKVRWFIALDFVAATIWNLGYLGLGWGVGDPIVDALKYYAKIAN WVAIALIIVILAPIFVKKKQKA >gi|302034490|gb|GL383261.1| GENE 186 169663 - 170025 378 120 aa, chain + ## HITS:1 COG:BMEII0787 KEGG:ns NR:ns ## COG: BMEII0787 COG3189 # Protein_GI_number: 17989132 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Brucella melitensis # 17 118 15 116 116 93 47.0 9e-20 MTIFRAVNIRDDLKKGPAEGYRVLVDRMWPRGVKKDDARLDERRTDLAPSSQLRTWWNHD PERFDEFAGRYEVELDESGAAKTFLEECAGRDEVILLYGAGDREVNHAVVLERILTELAN >gi|302034490|gb|GL383261.1| GENE 187 170056 - 170571 444 171 aa, chain - ## HITS:1 COG:MA1614 KEGG:ns NR:ns ## COG: MA1614 COG2110 # Protein_GI_number: 20090472 # Func_class: R General function prediction only # Function: Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 # Organism: Methanosarcina acetivorans str.C2A # 4 170 29 193 195 162 51.0 2e-40 MADITILRADITTLDVDAVVNAANRQLAGGGGVDGAIHRAAGPELSQACRKLRETTLTDG LPTGQSVATTAGKMPAKWVIHTVGPVWAKTIDKSDQLASCYRTSLHVADEIDARTIAFPT ISAGVYGYPMDEATRIAVETCRQTVTKVDTIYLVAFNAEAEAGYRAALGEE >gi|302034490|gb|GL383261.1| GENE 188 170689 - 171705 819 338 aa, chain + ## HITS:1 COG:CC2016 KEGG:ns NR:ns ## COG: CC2016 COG2130 # Protein_GI_number: 16126259 # Func_class: R General function prediction only # Function: Putative NADP-dependent oxidoreductases # Organism: Caulobacter vibrioides # 7 338 2 340 341 298 48.0 1e-80 MSTTRPTTTRAVHLASRPHGAPTEDNFRIEEISLPELSDGQILVANDVMSVDPYMRGRMN DVKSYVPPFHIDRPLDGGAVGTVIESRSEDIPEGSHVSHQLGWREHAVLNAGDAHIIDTD IAPASAYLSVLGMTGLTAYAGLTRAAEMKAGDAVFVSGAAGAVGSMVGQLARLLGASRVI GSAGTDAKVARLRELGFDAAFNYHDGPSTELLGQAAPDGIDVYYDNVGGDHLEAAIDHLN IDGRVAMCGAISQYNSVEPPCAPRNLALAIGKRLTLRGFVIAKYAEEVRPEFQQRMAEWL PADEIHWDETFRDGLDAAPQAFIDMLDGANTGKMLVRL >gi|302034490|gb|GL383261.1| GENE 189 171837 - 172784 646 315 aa, chain + ## HITS:1 COG:BS_yvfR KEGG:ns NR:ns ## COG: BS_yvfR COG1131 # Protein_GI_number: 16080462 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Bacillus subtilis # 1 302 1 297 301 178 34.0 1e-44 MDKPAIEIRDLVKSFPQTGSRERLIAVDHLSMTINRGEVMAFLGPNGAGKSTTVDMLLGM TRPDSGKVSVLGSDPRTAARTGCISAVFQTGGLLPDFTVAETMKAIAAAHGQRSRVKPLI ERWELAPFAGTKVGKCSGGQRQRLRFALAMLPKPDVLILDEPTTGLDVEARRHFWQVMGE EADAGRTVIFATHYIEEADSFARRVVLVSGGQLVADGPINEVRASVSGSIVRATLTDPSG LAEGLHTFPGINDVTVRGQQLIVHTSQPDDLARYLLAHTDAHGLLISTTTLEDAFVRLTG SNDSRDDADDWEAAA >gi|302034490|gb|GL383261.1| GENE 190 172781 - 173530 676 249 aa, chain + ## HITS:1 COG:BS_yvfS KEGG:ns NR:ns ## COG: BS_yvfS COG0842 # Protein_GI_number: 16080461 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Bacillus subtilis # 5 247 8 243 245 65 22.0 1e-10 MITYALLDIRRLLRNTGGTIFTVLMPAGFYLIFGATQSYTDAAVAHGNVKATIMVSMAVY GAVLAVTTWGSHAALEQQRGWGRQLALTPMTPLKYVFSKVLAIETVALVPLAVVFATGAI TNARVDGLRWLWSFLLCWVCSMPFTLFGLAVALLVRGEAATGITSFCTVAVAFLGNMFIP LNGFMLKLSRFTPMYGPGQLTRMPLIGQQMVTMRGVIDEPVWRPVVSIIAWTIIMGIVAV LAGRRRQNR >gi|302034490|gb|GL383261.1| GENE 191 173624 - 174760 849 378 aa, chain + ## HITS:1 COG:CC1149 KEGG:ns NR:ns ## COG: CC1149 COG4585 # Protein_GI_number: 16125401 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Caulobacter vibrioides # 25 378 52 389 399 122 34.0 1e-27 MVVIVGASHPIPLRRRNRNALAAGIWLVFLAYTVVSLQSSHLPPWRIALGWVGLTIFALF YLTLFWWHVDGLELWYTKRQVRRSAIVGQVVLVVLCALLALVSPKMVASALVYPIAFAVF QMPEVALEITLAIEVVGIAVLVWTVPDLMPWAISWAISVALVTVVGVLERTACRGQLACQ AEQDVLARLEEREQVASDVHDLLGQTLTVMAMKAQLAERLIGTDPDAARAQAVELHGLTR RALAQVRELVSDMAHMGVDAQLAAARTALEAAGVECVVSDTRTDVQGGCHGEGSEFDTVR GWVLREAVTNVVRHAQAHTCCVEIDDEILVISDNGRGRGGAPEGNGLTGMRRRVEAAGGE LWIGPGERGHGTRIVVTG >gi|302034490|gb|GL383261.1| GENE 192 174765 - 175385 504 206 aa, chain + ## HITS:1 COG:DRA0010 KEGG:ns NR:ns ## COG: DRA0010 COG2197 # Protein_GI_number: 15807682 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Deinococcus radiodurans # 5 206 11 211 211 183 56.0 2e-46 MIDKTPIRLVLADDQTLVRGALAALLGMEDDLEIVGTCGRGDEVVGLVQDTYADVCLLDI EMPGLDGITVAAELRDQAPWCRILIVTTFGRPGYLRRAMDAGVAGFLVKDTPAEDLAQVV RKVHAGGRAIDPALAAESLIEGHNPLSGREREILRLAESGASISLIASELCLSVGTVRNH VSSAIGKTGAANRTEAAVTARRRGWL >gi|302034490|gb|GL383261.1| GENE 193 175534 - 175683 58 49 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313802536|gb|EFS43758.1| ## NR: gi|313802536|gb|EFS43758.1| hypothetical protein HMPREF9576_00989 [Propionibacterium acnes HL110PA2] hypothetical protein HMPREF9589_02006 [Propionibacterium acnes HL059PA1] hypothetical protein HMPREF9593_02481 [Propionibacterium acnes HL046PA2] hypothetical protein HMPREF9604_00404 [Propionibacterium acnes HL036PA1] hypothetical protein HMPREF9605_00548 [Propionibacterium acnes HL036PA2] hypothetical protein HMPREF9612_01272 [Propionibacterium acnes HL063PA2] hypothetical protein HMPREF9597_00961 [Propionibacterium acnes HL005PA4] hypothetical protein HMPREF9598_02477 [Propionibacterium acnes HL050PA1] hypothetical protein HMPREF9600_00549 [Propionibacterium acnes HL050PA3] hypothetical protein HMPREF9608_01381 [Propionibacterium acnes HL067PA1] hypothetical protein HMPREF9614_01096 [Propionibacterium acnes HL002PA2] hypothetical protein HMPREF9594_00277 [Propionibacterium acnes HL005PA1] hypothetical protein HMPREF9595_01098 [Propionibacterium acnes HL005PA2] hypothetical protein HMPREF9596_02040 [Propionibacterium acnes HL005PA3] hypothetical protein HMPREF9565_01212 [Propionibacterium acnes HL053PA2] hypothetical protein HMPREF9572_02118 [Propionibacterium acnes HL072PA1] hypothetical protein HMPREF9592_01487 [Propionibacterium acnes HL046PA1] hypothetical protein HMPREF9601_01310 [Propionibacterium acnes HL030PA1] hypothetical protein HMPREF9602_00791 [Propionibacterium acnes HL030PA2] hypothetical protein HMPREF9568_01271 [Propionibacterium acnes HL013PA2] hypothetical protein HMPREF9570_01406 [Propionibacterium acnes HL043PA1] hypothetical protein HMPREF9571_00407 [Propionibacterium acnes HL043PA2] # 1 49 1 49 49 97 100.0 3e-19 MWTWANYIDGLCGRNQSTGRSIPHPRSPQDRTFHVIERVLDDRPKRCFP >gi|302034490|gb|GL383261.1| GENE 194 175658 - 176155 295 165 aa, chain - ## HITS:1 COG:BH0285 KEGG:ns NR:ns ## COG: BH0285 COG0406 # Protein_GI_number: 15612848 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Bacillus halodurans # 31 164 45 172 179 60 30.0 2e-09 MGVRLTMRGRSQARQAARTVADLVPHGTPTIASDQKRAVQTARPIARVLGVQVMTDPRLR EQGLGAMEGHTADELEPLPQPTGVHPADVRWAGGESLADVAERCHSLLDDLAARHLSAIV LVTHGDTMRILLGILDGRSHRDLDWDLSLTNGSVMVRNVDLGELH >gi|302034490|gb|GL383261.1| GENE 195 176282 - 177310 569 342 aa, chain + ## HITS:1 COG:Rv2236c KEGG:ns NR:ns ## COG: Rv2236c COG1270 # Protein_GI_number: 15609373 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin biosynthesis protein CobD/CbiB # Organism: Mycobacterium tuberculosis H37Rv # 16 315 9 305 313 181 42.0 2e-45 MSITPRRHVAVGLLCRAAGLGLGIIADHIVPDPQTHHPVAVFGAAVARLEKTMYADSTRR GTLFTVTCLTPLAVIGGAVDRLTRNRPALRIATTALATWAVVGSASLAREGRAMAGHLAN GDLVAARKRLPHLCGRDPDALDAAEIARGAVESMAENASDAAVASLWWGAVAGLPGLLVH RGANTLDAMIGHHNDRYEHFGKVAAYLDDVVNWVPARFTGALAAGCASTVGGDRKTTWRV VRAEHGHHPSPNGGWCESAWAAALGVQLGGRNVYYGNRVEFRPLLGSGTRPDADKTADAA RLVTTVTTAATWCAVAGLASVAHVLFYGGLIPRGLLPHSTRR >gi|302034490|gb|GL383261.1| GENE 196 177328 - 178782 931 484 aa, chain + ## HITS:1 COG:MT0268 KEGG:ns NR:ns ## COG: MT0268 COG1492 # Protein_GI_number: 15839635 # Func_class: H Coenzyme transport and metabolism # Function: Cobyric acid synthase # Organism: Mycobacterium tuberculosis CDC1551 # 1 484 1 479 494 447 52.0 1e-125 MTGILVAGTSSDAGKSLVVTALCRVARRRGVDVVPFKAQNMSNNSMVCADGSEIGRAQYL QATAAGVTPTSAMNPVLLKPGTDRRSFVVLRGKPGGVLEAGEYTTGRRYLAEAAWAAYDE LAASHDMVICEGAGSPAEINLRRGDYTNMGLARAKNLPVVLVGDIDRGGVLASLFGTWAL LDDDDRALLAGYIVNKFRGDDAILAPGLEEITDRTAMPSFGVLPWVPGVWLDGEDALEVG RWRHEGDAVDPSSLRVAVVRFPRISNATDVDAMAGETGVDVQVTTNPDTCQAADVLVLPG SRSTVSDLEWLRRSGIADVVARRAEQGRTVVGICGGYQMLCRTILDPDGQETTPGSVVEG LGLLPVEVDFAATKTLALSHGTWRGIEVGGYEIHHGVCRSLEDAEAFLDGVHVGPVWGTM WHGAFEHDEFRRTWLADAARHAGSSWRPHSDELGYQARREAMIETLADALEAHVDVDRIL HLVR >gi|302034490|gb|GL383261.1| GENE 197 179109 - 179864 750 251 aa, chain + ## HITS:1 COG:SMc03191 KEGG:ns NR:ns ## COG: SMc03191 COG2243 # Protein_GI_number: 15966675 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-2 methylase # Organism: Sinorhizobium meliloti # 1 239 1 237 251 103 34.0 4e-22 MNDATSRTLFGVGVGPGDPELVTVKTVRILREADVILVPYTEATTDGPGRAESIITAVAP EIAGRIRRIPFSMRERSGVGEKRKASWQVSSDAVVTAFDEGARTVALATVGDPTVFSTFT YLRANVEERLPDVTVELSPGITAMQALSAASGRPLVEGKEILALVPATVGISKLGQVLDL VDSVAIYKGGRKLPDVVEQLRSRDRQAVIGTDVTLESEQIITLDEVADAQTLPYFSTVLT TPERTTTGGKL >gi|302034490|gb|GL383261.1| GENE 198 179861 - 180832 810 323 aa, chain + ## HITS:1 COG:MJ1578 KEGG:ns NR:ns ## COG: MJ1578 COG2875 # Protein_GI_number: 15669774 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-4 methylase # Organism: Methanococcus jannaschii # 42 293 6 255 259 215 43.0 1e-55 MSEPQAARPTQHVSEKALEDLDHNVIEPPPVPRRDIPEGAGKVVFVGAGPGAPDLVSVRG ARVIETADIIIWASSLVHPDMVARHKEGAELIDSASIPLEDLEPLYTRARDEGLMVARVH TGDPSIYGATAEQRDLCRRIGIDFETIPGISAFSAAAARMDVEITVPEVSQSLILTRLEG GRTPMPDGETVASFARHGATMAIYLSAARNKALQEALLEGGYLPETPCIIGYAVTWPEEM MFRCDLAHLSETMRNHKLWKHAVVLVGPALAEGPISTRSHLYHPGFRHEYRAADAQAHAD LKAHGTCGVYHRNSTNPDTKGNS >gi|302034490|gb|GL383261.1| GENE 199 180829 - 183393 1970 854 aa, chain + ## HITS:1 COG:FN0951 KEGG:ns NR:ns ## COG: FN0951 COG1010 # Protein_GI_number: 19704286 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-3B methylase # Organism: Fusobacterium nucleatum # 563 806 3 241 249 196 41.0 2e-49 MIRVHGYLGTISDALREEVTQADLVVGGQRHLDALAVPDDKRQKLGLIGPAIERIQSLPD DANVVVIASGDPLFFGVVRRIRQAGLRVEVVTAPTSLQAAFAAVALPWDDAQFVSSHSKD IETAVRLAKIHPKVGVLTAPNRGLAELVDGLAGRGKTFVLAEKIGEEGQRVRVLDEDAAK AVIADEDILSPNVVLVLEHHPDSPEALGVNPELAGDVNVNGPDAPQPGSDTNPDGSDRDP IIGQIINSDAAVAHAEAIDHALKRETKKYVGPSRTGLAAAWGECDLIISHLALGATTRII APLLESKKTDPGVVVVDEAGRFAIPLVGGHVGGANELSRTVAEALSGTAVVSTATDSLGV PALDQLGWAYEGDVAGVTGSIIAGRPVLVVREQPWPLPPLPKNVTEDAETPAARVIVSER VAERVFADHGDDLPTVVLHPSCLVVGMGCNKGTEVESLRQLLVKTLEDNGLALGSVTRLV SHEVKAGELGLVKLANQLGVEYRTESAEALAAHDVPTPSDVVAREVGTPSVSEAAVLCQG AELLVHKTKTSDATCAIGRIPAHGHLSVVGLGPGSRDLLTPRAVEAIRNATFVAGYAPYV RQIRDLVRPGATILATKMGTEEERTQAAIEATRDGRNVAFVCGGDPAIYAMASPTLEMGT DGIDVEIVPGVTAELAISAILGAPLGHDHATISLSDLHTDWDLILKRVKAAAEGDLVTTF YNPRSRTRTHQLPDALAIMAEHRPPSTPVALVSHAERRQQQVIMSTLEEFKPEWCGMTTL VVVGSTTTKYVSSGDGRRLMVTPRDYHWMDGHVCSEARKNYTHKDLPRADEETYLSKPPV HSTRMSKPINDTKD >gi|302034490|gb|GL383261.1| GENE 200 183396 - 184664 1002 422 aa, chain + ## HITS:1 COG:BH1496 KEGG:ns NR:ns ## COG: BH1496 COG2138 # Protein_GI_number: 15614059 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus halodurans # 11 267 4 255 279 100 27.0 5e-21 MTDPLASGTPLVIAAHGTRDEAGVAECRALAERVARKLPGIPVELGFVELAEPGIPEAVR AAVAQAPDNPEGADGDEEAAAVVVPLMFNTGGHVREDIPEAIDEGRGDARVMYSAPLLPD VRMRKALNHRLTETLAAGEGREEWRPRDTSAVLVGRGALVPDANASHYTLTRMFWEENDL SRVEPAFIQVTRPSVPEALSALAAQGADQIVVQGNFLFPGLLHVWMTEQVEAWQASHPGV EIRIAPVIGDCDEVADVVVDRYREPLDEVGLGEGAPVYMSGLRLQGRKVLVVGAGHVAER RVVRLLEAGADVHVVAPNSGIQLTRMFRKGLVNLERRAFQTKDLDGVWFVQALTNDPEVN ALVAEEADRRGIFCVRGDNSRKGSAFTPATQQAGGMTVSVVGDRTPRRSARLRDEVLRAL QG >gi|302034490|gb|GL383261.1| GENE 201 184706 - 185572 559 288 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3457 NR:ns ## KEGG: HMPREF0675_3457 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 288 1 288 288 533 100.0 1e-150 MTGASGGAYHRRVISHDLHALGFDAPDLDALVNSAAEAGAVGVEDVGGFDLLAAYTDPSG ARLALMKQKGHDEMETMASLVAPTTHPADLVRFSPAVALVDIYSHAGFASMLTGESVLTL PTTNRRHVARFLANVDDPVEVPLCAEPGDDTPRFVEHLRVGTVANQMLRVFESEEEYGRS HEGSLGSELQFAAGTLISPWLMEINAGRATRGEASAVAEMTMVCKKVEKRTNVLTGVDWY RIVGDTSIPMTLAVSANLPRVPHVGSVVTGQVVPVVSTGTWEGDALWG >gi|302034490|gb|GL383261.1| GENE 202 185617 - 185829 68 70 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTGWSCLQCGNVTLQLTLQILQCQLHCELKCSFLGCGVGFFDVDRGGRFPVAGSGTPSRA SMFHVECRQL >gi|302034490|gb|GL383261.1| GENE 203 186276 - 186515 62 79 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3459 NR:ns ## KEGG: HMPREF0675_3459 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 16 79 1 64 64 111 96.0 1e-23 MSLYGAALMRSQEPGVNPGLLRSGDGDDVGETTGSDPGKGRPRVIRNPKTPMHGAVSFGS RIKVLAPRRNCHALIEAIG >gi|302034490|gb|GL383261.1| GENE 204 186490 - 187554 716 354 aa, chain + ## HITS:1 COG:Cgl1588 KEGG:ns NR:ns ## COG: Cgl1588 COG0609 # Protein_GI_number: 19552838 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Corynebacterium glutamicum # 21 345 28 354 358 208 43.0 1e-53 MPSSRRSVERDRRLPVAPLLLVLVVLIVVSAVISLAIGSEPLPLRGVLDTVGARVTGQPG PDPTIDVIVWDLRAPRALLAVIVGAGLALAGSGMQTLVRNPLADPYLLGVSAGASVGATA VIALGMFTSWGTHRLTLGALVGALAAAALVYLISMAQGGMTPLRLVLSGVVLSSAFSALA SFLVFRSPDPRAAQSVLFWMLGSVAGATWDSLWVAALVTVVIAVLMIAFSGWLDALAAGT DVARSLGIPDTRVRKALFVGNSVLVGVLVAVSGGIGFVGLVIPHMARLLVGASHRSMLPI AAAVGSLFLLWVDVGARVIAAPQEVPLGVVTGFIGAPIFLYLMGRSQYRFSSES >gi|302034490|gb|GL383261.1| GENE 205 187551 - 188342 209 263 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 4 222 2 225 245 85 26 3e-15 MTCLDVRNVQCRIGDRVIVDDVSFTAEAGQLTAIVGVNGVGKSTLLRSIAGVRKVNAGDV LLDGKSVNQYTPMQRARLMAFVGQEESPSPDLLLGEMVALGRTPHRKPWQVGQRSERAII RDALALVGLDHLIDRRCDHLSGGERRRAVIARGLAQGADLILLDEPTNHLDVRHQLQLLE TLRASGRTVVATIHDLSMAASHFDRVVVLADGGVLATGPAEEALSPSNVATAFHVIAHHV TTPEGSRELVCTAALPEPSRKEI >gi|302034490|gb|GL383261.1| GENE 206 188344 - 189414 942 356 aa, chain + ## HITS:1 COG:PA2913 KEGG:ns NR:ns ## COG: PA2913 COG0614 # Protein_GI_number: 15598109 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Pseudomonas aeruginosa # 38 339 28 320 323 162 32.0 9e-40 MSIPRLPIAVVACLAMALAGCSSGSTSKGDDAKSSSEVTLTNCGNKVTYPKVAQRLYVND GNIIAMALSAGAAKQIAAVSSLGDDKTILAAKYGSHVIDNLHEAVKGYPTLESIIANKPD VVVAGWNYGFSEEGNLTPDKLHERGIDSYLLSESCRQKGSEKARGVMQPWDAVRTDLSNL AKLTGNEPTGKKAVKDLDDRLDALNKAPKAAKTPVVLLFDSAKDTVLTSGNKGGPQAIIN AAGGQNAAHDVNDTWVRISWEKVATLKPDAIAFVDYDAQPYSEKVKILQSNPATKNLAAV QKKRFLNLPYAMWTSGPLNIDAAEHLRVSLEKWGLEPKSSIKPQLTIPASVPGHEG >gi|302034490|gb|GL383261.1| GENE 207 189504 - 190730 545 408 aa, chain - ## HITS:1 COG:MT0627 KEGG:ns NR:ns ## COG: MT0627 COG1373 # Protein_GI_number: 15840000 # Func_class: R General function prediction only # Function: Predicted ATPase (AAA+ superfamily) # Organism: Mycobacterium tuberculosis CDC1551 # 1 407 1 410 411 258 39.0 1e-68 MQLLQRNITAWVQELLDISPIVVIEGARQVGKSTLTGMIDNANTTFTTMDDDLTRTFAHD DPAGFLSSAKEGRLVIDEIQRCPELILPLKAVVDNDRRPGRFVLTGSANLLRLPGAQDSL AGRAMTARLHPFSQGELEGHKEDWVSWLLSPDRRKAQEADRSNVITRLTVGGYPLVQSMS PRVRTAWLKDYANRLVQRDASDMAQTRIPILGQLLQLLAAAPGAELVQDRLAQKLKVTRG TVVRYSDLLESLFLIHRLPAWSLNLTKRQIQRPKVFLTDTGLNAALSNMDAAHLSSMQGA DHLGPLLEQFVVCELLRQQGWSATPFKLFHYRDRQGAEVDIIVETPTGIIAVEVKSAVAA TARHFQHFKALRDRLGDEFLAGIVLTTGTGQKAGDRLESLPISSLWSR >gi|302034490|gb|GL383261.1| GENE 208 190823 - 191476 582 217 aa, chain - ## HITS:1 COG:mlr1379 KEGG:ns NR:ns ## COG: mlr1379 COG2082 # Protein_GI_number: 13471413 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin isomerase # Organism: Mesorhizobium loti # 2 207 3 206 210 189 49.0 3e-48 MAHEYVNNGSDIYRESFRIIRSEANLDRFPTDVEGVVVRMIHAAADPAIADDIAFTPAVV TAARRALGDGAPILCDSSMTATGIIRSRLPRDNETICYIKDPRLADIAQAKDMTKTCAAV DLWTEEGKLDGAIVAIGNAPTALFRVLEVCEETGARPAAVVGIPVGFVGAAESKQALVDS KLGLEYLTLLGRRGGSAIAVAAVNAIASTDELTNSHR >gi|302034490|gb|GL383261.1| GENE 209 191782 - 192465 752 227 aa, chain + ## HITS:1 COG:MTH130 KEGG:ns NR:ns ## COG: MTH130 COG0310 # Protein_GI_number: 15678158 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Co2+ transport system, permease component # Organism: Methanothermobacter thermautotrophicus # 1 218 1 215 222 189 49.0 3e-48 MHIAEGVLSPAQCAVWYAAAAPFVVHGGYRVVKEVKEHPENKLLLATAGAFTFVLSAIKL PSVTGSSSHPTGTGVGAALFKPPVMAFLGMIVLIFQALLLAHGGISTLGANTFSMAIAGP WAGYAFYKLTKKLRGPDALAIFLCMVFSDFITYVVTSFQLAFAFPDATGGFWGAVGKFLG IFAITQVPLALIEGLVGILLFRFLAKVAAPQLKQLGVLDDNPEVAHA >gi|302034490|gb|GL383261.1| GENE 210 192458 - 192892 474 144 aa, chain + ## HITS:1 COG:alr3944 KEGG:ns NR:ns ## COG: alr3944 COG1930 # Protein_GI_number: 17231436 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, periplasmic component # Organism: Nostoc sp. PCC 7120 # 52 117 33 100 100 63 51.0 8e-11 MPENTVAKAHRDSSLTSKSKWVTPVIIVLVVGLFIISMVLGAKKTSGGEEGFGGTDDAAA EAAEKAGAKKWIKPIFEPNSSEVESGLFALQAALGAGIVGYALGRMSGRTKGREEAERAS DLNSVDDVPQAAVTSSEDTSTSKS >gi|302034490|gb|GL383261.1| GENE 211 192889 - 193734 600 281 aa, chain + ## HITS:1 COG:MJ1089 KEGG:ns NR:ns ## COG: MJ1089 COG0619 # Protein_GI_number: 15669277 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Methanococcus jannaschii # 6 275 9 257 268 73 25.0 4e-13 MTITSLDDAAWDSPWRRRPVGEKVALSTALLLTALCTPSMEASRWVRSVVGSGIWPGALL AGIVSVIVVLGPARIAGRVLWQAVVAPLVFLVIGGISVLVSLGSTPVGTVWWHAGAFSIG PVSSAQAMSLIEHGVCGTLALMVLAVTTPMVDLLTWLRKFHIPDPLLEIASLTYRLIFVL LDTVVTASEAQHARLGDTPAGRFGGFNRRMNNTAALLGSVGIRAWARANRLNDGLVNRGF EAALATLPIKRTGSVRYKIIVVIVIAVLWVISWTTTGRIFR >gi|302034490|gb|GL383261.1| GENE 212 193731 - 194567 613 278 aa, chain + ## HITS:1 COG:MJ1088 KEGG:ns NR:ns ## COG: MJ1088 COG1122 # Protein_GI_number: 15669276 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, ATPase component # Organism: Methanococcus jannaschii # 6 256 3 254 279 200 40.0 3e-51 MSAKVLLSTEHLYATHPGRPMVLTDVNVSFRAGVRVAILGANGSGKTTLMRCLSGSLKPA KGHVKRGDIVVSYGRAQLREHRRAVQLVLQDPDDQLFSADVSQDVSFGPMNMGLKVDEVR DRVSESLELLGASHLAERATYQLSYGERKRVAVAGAVAMRPDLLLLDEPTAGLDPVGVTQ MLEALDRLRDHGTTVAMTTHDVDLALAWAQEALVVVDGQVHQGPIGELLADADTVGRAHL HLPWPLELARRLGVRDLPRTMDDVVAMLSDNPSPAPSN >gi|302034490|gb|GL383261.1| GENE 213 194629 - 195309 506 226 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3469 NR:ns ## KEGG: HMPREF0675_3469 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 226 4 229 229 353 99.0 2e-96 MNRSSSSAALLVGAVAVPIAVCAVLSALIDVFVPPAAALVLVLVIVIVCLRGSWLVDALV IVVSAIGFDFFLTYPYRSMKIASRPDIEVTIVLFVVGAAIAGISRWALTASDLAERRQGY VTYALDARSGDMSRDEVAQRLAGLVGAEAGAWVDGAPPSGEAVIQDATAMRTDVGLEDPS RVGFPTDRFICFPAAGGYIRISAASRHVRPTAEQMRAACLLASQIS >gi|302034490|gb|GL383261.1| GENE 214 195336 - 195932 496 198 aa, chain - ## HITS:1 COG:all3722_2 KEGG:ns NR:ns ## COG: all3722_2 COG2242 # Protein_GI_number: 17231214 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-6B methylase 2 # Organism: Nostoc sp. PCC 7120 # 4 192 5 192 197 142 42.0 6e-34 MTHDPDTSLLGRTPGLAEEHFAHDGLITKHAVRAVALAALRPMPGQLLWDLGTGAGSIAV EWCRTDPTCRAIGLERKAERAANARTNASELTLPGQFDVIDADLAKGLPEGLPDPDAVFI GGGATKALVNQCRPRLPIGGRLVVHGVTMEAEMLVETLHCDLGGDLIRFGVETADVIGRL HGWKPARTVVAWTWQRTE >gi|302034490|gb|GL383261.1| GENE 215 196160 - 196774 406 204 aa, chain + ## HITS:1 COG:MT2915 KEGG:ns NR:ns ## COG: MT2915 COG2109 # Protein_GI_number: 15842390 # Func_class: H Coenzyme transport and metabolism # Function: ATP:corrinoid adenosyltransferase # Organism: Mycobacterium tuberculosis CDC1551 # 1 204 1 207 207 233 60.0 1e-61 MPHARTSAEPDDGLSTRQRRLRPVLVVNTGEGKGKTTAAMGTALRAWHQGWRVGVFQFVK SGRWHVGEEDALRALGQLHEEIGVGGPVTWEVMGTGWSWTRSFDAAENPEAAAREGWRHV SDLLAHEALDFYLLDEFTYPMDWGWLDVDEVVETLVNRPGTQHVVITGRRAPDALVEVAD IVTEMTKIKHPFDVGQRGQAGIEW >gi|302034490|gb|GL383261.1| GENE 216 196774 - 199197 1529 807 aa, chain + ## HITS:1 COG:MT2914 KEGG:ns NR:ns ## COG: MT2914 COG1797 # Protein_GI_number: 15842389 # Func_class: H Coenzyme transport and metabolism # Function: Cobyrinic acid a,c-diamide synthase # Organism: Mycobacterium tuberculosis CDC1551 # 1 453 1 448 457 310 45.0 8e-84 MRLPRILIAAPASGGGKTTVATGLMAALRASGRTVAPFKVGPDYIDPGYHSMASGRPGRN LDSVMCGDELMAPLLAHGFVTPDPADIAVIEGVMGLFDGQLGTGRGSSAEIATTTRTPVV VVVDTAHASLTHAAVVAGLATFDPDVTVAGAILNRVASPRHGAEVARGLAQLGIPVLGQI PRTESIFVPSRHLGLVPAGEWEDSATKVAGLGGLIAEYVDLDAVMDMAATAPDLDVEPWD PAAALESAGWQGHPFGESPLVGMFAGRAFTFRYPETTEMLIAAGFRVVDVDPLTDRRLPD GIQGLYLGGGFPQMHATDLETNSELADDVRSHAEAGMPIVAECAGLLYLCRHLDGHEMAG VLPMDAAMAKRLTMGYRVATRDSISVVGHEFHRTTTTPLADLDPAWHITMPDGTDRAEGA LGDPAGLGRPTIQASYLHLHWAGQPTQAAWFASEVTKFHEGRGDQVVEPDLNHHGDRDIA DGLVDLAVNVRVNEPPQWLRDAIISTEHDWARYPDATPGREALAAMHGVPTDMVLPTAGA AEAFPLVATLEPRHAIVVHPQFTEPEAALRAAGISVGRHILNVSDGFALDPDLVPDDADL VVVGNPTNPTGRLHPATDLLALRRPGRVLVVDEAFMDATDESQSLIGSDMDDLLVLRSLT KTYGLAGIRAGYVVGDSQLVAQLAAHQTPWSVSTPAIAAMIACTCEEARRFRTQLRDDIP AARADLVDKLKGLGLSVVDSEAPFVLVNTSSLSGDSIRQPLAERGFAVRRGETFPGLGPT WIRLAVRDSNIHAELARAISDLTAHRN >gi|302034490|gb|GL383261.1| GENE 217 199207 - 199983 800 258 aa, chain + ## HITS:1 COG:Cgl1952 KEGG:ns NR:ns ## COG: Cgl1952 COG0007 # Protein_GI_number: 19553202 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III methylase # Organism: Corynebacterium glutamicum # 12 245 14 250 250 207 50.0 1e-53 MIYSADLVPGTVTLVGGGPGDPGLLTVAGFEAVRQADVILYDRLAPTAIMDENPQAERIP VGKVPRGPYVPQERTNELLIEHAKAGRKVVRLKGGDSFVFGRGGEEWQACAAAGVPVRII PGVTSCVAGPELMGVPLTHRHMVQGFTVVSGHVAPGDTRSELDWAQIAKTGTTLVILMGV AHIGDIATRLMDGGLAGDTPVAIIADASLPTQRSLTTTLEKAAEDMAEAEINPPAITVVG DVAGLDLDGTQAHVPSDH >gi|302034490|gb|GL383261.1| GENE 218 200003 - 200755 460 250 aa, chain - ## HITS:1 COG:all1780 KEGG:ns NR:ns ## COG: all1780 COG2099 # Protein_GI_number: 17229272 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-6x reductase # Organism: Nostoc sp. PCC 7120 # 1 239 1 240 245 142 39.0 8e-34 MDVLILGGTTKARQLATRLIDEGVDLCSSLAGRTKSPRPVPGPTRVGGFGGIDGLKEFLT DNEVKVMVDASHPFAAAMHGHAAQACRDLNLPLARLAPPSWRTQPEAATWHWVDDHDGAT QVLADLPDVILLTVGRQPVSHYLRLGPRRVIVRCVDAPEEELPAGWKVLRERGPFTLDRE REIFSQGVATLVSKDSGGTGLDPKLRLAAETDVQVVMVSRGPAPGWGDELSTVDDAVQWT GNHIATVIEQ >gi|302034490|gb|GL383261.1| GENE 219 200982 - 202649 1089 555 aa, chain + ## HITS:1 COG:CAC1372 KEGG:ns NR:ns ## COG: CAC1372 COG2038 # Protein_GI_number: 15894651 # Func_class: H Coenzyme transport and metabolism # Function: NaMN:DMB phosphoribosyltransferase # Organism: Clostridium acetobutylicum # 18 356 7 345 352 249 41.0 1e-65 MARLPESLSAESLLARTVRGIRGADAKALEAARARQQLLTKPEGSLGLLEDLSIRLAGMY GQVPVTVPSHPVVGLFAGDHGVWAQGVSPDPQEITTQQMINMAAGGAAISVLSRQMGAQL WITDVGARHEVDAPIRQRCVRRGTDDISQGPAMSLDEAVEALEVGIETGVAAVEQGADIL ITGEMGIANTTPASALISVFTGLPPAEVTGRGAGSDDRRHQHKIGVVARALQVNRPEAKH PIEALAKVGGFEHAAMAGFILAAASSRIPVLIDGVIACSAALTATAICPEARDFIITSHA GAEPGITASTSALGLPALLDLGMRLGEGSGAILTLPIVQASAHILNEMATFEDAEVIDIK VSGETEIPDTVQTSVPPCRMLVIGGARSGKSTFAESRLPRDSRVTYVATSQRNPGDAEWE ERIRLHQARRPATWQTVETTDIASVLLADDDSPVLVECLGVWITRILDEVGAWAAAPGDE AWQNDLRRHVNDLASAIRGTRRDVIFVSNEVGMGVVPDTPAGRLFRDELGRLNAAVGEAC DEVWMCVAGIPKRWA >gi|302034490|gb|GL383261.1| GENE 220 202646 - 203485 430 279 aa, chain + ## HITS:1 COG:STM2017 KEGG:ns NR:ns ## COG: STM2017 COG0368 # Protein_GI_number: 16765347 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin-5-phosphate synthase # Organism: Salmonella typhimurium LT2 # 28 267 17 242 247 72 32.0 9e-13 MTDEQHPDLGRLGPLRGVAEALSLFTILPGPYLNDIDRPLARRAITAFPWLGLCLGVVAG GIVALVLGLGAGPWLAGVLALGWLAGATGGFHLDGVADTADGLGSRAAPEKALMIMKKSD IGPMGVMSIVLLLLVDAAAVVSLAGTAGSGAWWRVAILVGLGPALARAAILLATMTEVPC ARPGGFGSLVAGVTTPRSAAINLTVLGCVCALAGLVAGGWMWCLVTVSCAALTLLIARGW IHHLVRRLSGMTGDTFGSINEVTQMTFWVLTALTVAVVS >gi|302034490|gb|GL383261.1| GENE 221 203482 - 204246 326 254 aa, chain + ## HITS:1 COG:RSc0283 KEGG:ns NR:ns ## COG: RSc0283 COG0614 # Protein_GI_number: 17545002 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Ralstonia solanacearum # 3 250 5 274 281 81 30.0 1e-15 MIDDLGVKASVARPVQRVVSLVPSITEAIAMTCPHVLVGCTDYCIRPTHLEEIVGHEVVR VRGTKNPDRKAIIDLRPDLVVANQEENREHDVTLLREAGVAVWVTRIDTVEEAISSLTRL FEEGFGVRCPQWLEEAGREWREPCRGEVLSAVTAVWRDPWICVGKDTYISDVLRRVGIEL VDLPGESRYPHVELTDIAAAHPDRVILPDEPYHFGPDDVSAFPGLDVRLVDGQKLAWYGP SMVGARRYLASALR >gi|302034490|gb|GL383261.1| GENE 222 204468 - 206105 1107 545 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3479 NR:ns ## KEGG: HMPREF0675_3479 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 545 1 545 545 1100 100.0 0 MKSHKLLTFAVAAIMATSGLSTMIPTQSALASGPSQGAQSQHVGPMTCVPFSGRPGSSGQ LPLGVIPPNWGTDGWQRMDSTSRSDLPSKIVMRDNTEGFNQRMDFALRDGKVYGRFQSEN QWRHIDTPSCLDGHISAISVNDAMLAAVDSNGWVYSLNNLLSSPKDWGWFRAWGSPFWFG RGLKLDNHDQGWWALSLIDNQTDRTYRGVDGHDHPISLAMCTEIMMVSKDGAHIYQHDPW LPNDYSFEASTPYNSRFRVHSMSASGSVALITNDHGDMFTRLWDYDIAGTDPAQFRYTWQ DQSNLPSPSTWLQGKVDPRYAAIKLPPAGWKHQPKIPGEITDRLTVVSTAPGSQNRELRV EGRREGHTGYWSKMIDAKAWKFVPTGQNLKGKPLDNPQRDTSKVDLGSASGLNYSGNLQG KANINIKDFAYQSTTRTIELTVGEKKYPVKLHSIDGRLKTTLSMLSHRERGLTSTPRYYD AAIEVPDSYLKDPDFSPFMKGYLKGEKVHELYLEVTKDSFKVINDRHPEIALRNGRNVST LDRAK >gi|302034490|gb|GL383261.1| GENE 223 206038 - 206166 61 42 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVLRPEVAMIAATANVSSLCDFIRTVSLVSSYVLTLIVLVIR >gi|302034490|gb|GL383261.1| GENE 224 206308 - 206514 69 68 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313765457|gb|EFS36821.1| ## NR: gi|313765457|gb|EFS36821.1| hypothetical protein HMPREF9567_00172 [Propionibacterium acnes HL013PA1] hypothetical protein HMPREF9575_01077 [Propionibacterium acnes HL110PA1] hypothetical protein HMPREF9576_01022 [Propionibacterium acnes HL110PA2] hypothetical protein HMPREF9589_02037 [Propionibacterium acnes HL059PA1] hypothetical protein HMPREF9593_02513 [Propionibacterium acnes HL046PA2] hypothetical protein HMPREF9604_00374 [Propionibacterium acnes HL036PA1] hypothetical protein HMPREF9612_01303 [Propionibacterium acnes HL063PA2] hypothetical protein HMPREF9597_00991 [Propionibacterium acnes HL005PA4] hypothetical protein HMPREF9598_02508 [Propionibacterium acnes HL050PA1] hypothetical protein HMPREF9600_00579 [Propionibacterium acnes HL050PA3] hypothetical protein HMPREF9606_00339 [Propionibacterium acnes HL036PA3] hypothetical protein HMPREF9608_01350 [Propionibacterium acnes HL067PA1] hypothetical protein HMPREF9609_02118 [Propionibacterium acnes HL027PA1] hypothetical protein HMPREF9613_00851 [Propionibacterium acnes HL002PA1] hypothetical protein HMPREF9614_01128 [Propionibacterium acnes HL002PA2] hypothetical protein HMPREF9618_00351 [Propionibacterium acnes HL082PA1] hypothetical protein HMPREF9620_00381 [Propionibacterium acnes HL037PA1] hypothetical protein HMPREF9565_01244 [Propionibacterium acnes HL053PA2] hypothetical protein HMPREF9615_01396 [Propionibacterium acnes HL002PA3] hypothetical protein HMPREF9590_01973 [Propionibacterium acnes HL059PA2] hypothetical protein HMPREF9592_01519 [Propionibacterium acnes HL046PA1] hypothetical protein HMPREF9602_00760 [Propionibacterium acnes HL030PA2] hypothetical protein HMPREF9344_00894 [Propionibacterium acnes HL097PA1] hypothetical protein HMPREF9568_01240 [Propionibacterium acnes HL013PA2] hypothetical protein HMPREF9581_00892 [Propionibacterium acnes HL087PA3] hypothetical protein HMPREF9586_01173 [Propionibacterium acnes HL083PA2] hypothetical protein HMPREF9584_00131 [Propionibacterium acnes HL092PA1] hypothetical protein HMPREF9579_00978 [Propionibacterium acnes HL087PA1] hypothetical protein HMPREF9588_01511 [Propionibacterium acnes HL025PA2] # 1 68 1 68 68 110 100.0 5e-23 MDIDVATADGAGMAVAMSGTRVAASIRGRFVMSIAGVSLVTKQTKCVQPFCCRLCQRLAL NRTSFDVS >gi|302034490|gb|GL383261.1| GENE 225 206762 - 208351 1144 529 aa, chain - ## HITS:1 COG:Cgl2977 KEGG:ns NR:ns ## COG: Cgl2977 COG3037 # Protein_GI_number: 19554227 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 5 475 4 478 513 563 71.0 1e-160 MNIALAIVQFLVNEILSVPAFLIGIITAVGLAAMRKSIGQIAGAAIKATLGFLLIGAGAG LVVNSLGPLGKMIEGALGAQGVVPTNEAIAGIAQQQFGSQVAWIMLAGFLISLVLARITP LHYVFLTGHHMLFMATLITIVMASTSMPTSIVIGLGSLLLGVLMVSLPALAHPFTRKITG GEDIAIGHFGTSAYIAAAATGRLVDPHGKSQSTENIKVPEGLRFLRDSMVATALSMVLMY VVVAIVFLARRGEKAAFQTFSKPATGTGNYIMASVTQGLEFGIAVAVILFGVRTILGELI PAFQGIASKVVPGAIPALDCPIVFPYAQNAVLIGFMSSFIGGLVGLTILATVLGPAWGLA LILPGLVPHFFTGGAAGVYGNATGGRRGAVAGAFVNGLLVTFLPAFLLKVLGPFSSANTT FGDADFGWFGILIGYGARTGTVSGSIILALIGATILGSAILIQRRAGGWDPAPARGSSSD GVTAVVTAEEVSDDPDEATRTATASTISHRRIAPPVGAPTPPSRDELGL >gi|302034490|gb|GL383261.1| GENE 226 208401 - 209165 376 254 aa, chain - ## HITS:1 COG:Cgl2978_1 KEGG:ns NR:ns ## COG: Cgl2978_1 COG1762 # Protein_GI_number: 19554228 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Corynebacterium glutamicum # 1 146 1 144 178 137 53.0 2e-32 MIDLTDLLPPAAIRLDAHVKDWREALQAVGHLLVATDIATPRYTQAMIDNLEKNGPYIVV APGFALAHARPDSSVLRTGMSWIRLDEPVAFGHETNDPVTLVAGLAATDASAHQNVLAAL ASALADPNRRNALDTATTPQEVVSILSNEAGHRSAEASTSQNLLLTVCGNGLGTSLFLKN TTEQVLDAWAWTPYLSVEATDTISARGRCSEADAILTSGAIAQTLGELSIPVEVIDDFTS VSQVDAALRRIYDV >gi|302034490|gb|GL383261.1| GENE 227 209233 - 209388 139 51 aa, chain - ## HITS:1 COG:no KEGG:PPA0450 NR:ns ## KEGG: PPA0450 # Name: not_defined # Def: S-ribosylhomocysteinase (EC:3.13.1.-) # Organism: P.acnes # Pathway: Cysteine and methionine metabolism [PATH:pac00270] # 3 51 102 150 150 95 91.0 6e-19 MATLRDILKLNTSPAANEVQCGWGANHSIKAAQEAAHTMLNHRDHWKQVVA >gi|302034490|gb|GL383261.1| GENE 228 209465 - 209641 73 58 aa, chain - ## HITS:1 COG:Cgl2496 KEGG:ns NR:ns ## COG: Cgl2496 COG3335 # Protein_GI_number: 19553746 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Corynebacterium glutamicum # 1 41 70 110 149 66 70.0 1e-11 MHFTPTYSSQINQIERLIADITRGLLQRPDHHTVQSLERDFCKLGQSMNRKLQALYLS >gi|302034490|gb|GL383261.1| GENE 229 209608 - 209844 76 78 aa, chain - ## HITS:1 COG:RSc0110 KEGG:ns NR:ns ## COG: RSc0110 COG3335 # Protein_GI_number: 17544829 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Ralstonia solanacearum # 1 65 216 280 363 57 44.0 8e-09 MFAALNVYDGTVIPSIHWHHRAEEPKKFLQKIDKTTSKHVDVYVACDNYATHKHSSVKTQ LAKHPDPICTSLRHTHRR >gi|302034490|gb|GL383261.1| GENE 230 209977 - 210339 66 120 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313772999|gb|EFS38965.1| ## NR: gi|313772999|gb|EFS38965.1| conserved domain protein [Propionibacterium acnes HL074PA1] conserved domain protein [Propionibacterium acnes HL083PA1] conserved domain protein [Propionibacterium acnes HL007PA1] conserved domain protein [Propionibacterium acnes HL056PA1] conserved domain protein [Propionibacterium acnes HL053PA1] conserved domain protein [Propionibacterium acnes HL045PA1] conserved domain protein [Propionibacterium acnes HL038PA1] conserved domain protein [Propionibacterium acnes HL096PA2] conserved domain protein [Propionibacterium acnes HL043PA1] # 1 120 1 120 120 206 100.0 6e-52 MLDIDSACATTVIEPAAPLKRAATITVATTAETDFLILISMLLLRAILRFLKISQALFYP CLKVLYPELTQSQPSAWAGHVASRKNLRLDMIEYGVDASTGKHNSGTIHVSADSAAACQG >gi|302034490|gb|GL383261.1| GENE 231 210224 - 210610 125 128 aa, chain + ## HITS:1 COG:no KEGG:PPA0448 NR:ns ## KEGG: PPA0448 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 98 1 98 165 159 98.0 4e-38 MRIRKSVSAVVATVIVAALFSGAAGSMTVVAHAESISNTGQTVTSAMQALSDRNDLAHGG DGRIAVGDREVVRWHGGIPVAEVANSHQVSTYSWTSWGAQSRPFCAAPFRAQTTSQNQAL GQQNRRCS >gi|302034490|gb|GL383261.1| GENE 232 210509 - 210706 123 65 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|327447085|gb|EGE93739.1| ## NR: gi|327447085|gb|EGE93739.1| conserved domain protein [Propionibacterium acnes HL043PA1] # 1 63 1 63 74 105 100.0 9e-22 MIQSAAALATSYGIPALPKVKIIGAFSHISVCSRTSAILLAQGLILAGSLCTEWRSTKRA TLRPP >gi|302034490|gb|GL383261.1| GENE 233 210731 - 211177 434 148 aa, chain + ## HITS:1 COG:no KEGG:PPA0449 NR:ns ## KEGG: PPA0449 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 148 1 148 148 240 98.0 1e-62 MVVSKKFDDLLGMLGAIVFFLVIVILVMAPFIMIPALFALVFQECYLDSPWTWETVVLGG LVLFALGMGVSLLMGVLARVVAPLTHPVVNRVFKEILEFLVLWWFYSTLMHPASYAFWAS IVVMIMTTVTEPILDRAIERQKHAPNQP >gi|302034490|gb|GL383261.1| GENE 234 211328 - 211981 459 217 aa, chain - ## HITS:1 COG:lin1327 KEGG:ns NR:ns ## COG: lin1327 COG1854 # Protein_GI_number: 16800395 # Func_class: T Signal transduction mechanisms # Function: LuxS protein involved in autoinducer AI2 synthesis # Organism: Listeria innocua # 64 217 1 154 155 192 58.0 3e-49 MGMRSVQALMELTRSYAVRPSGFRLVNGYKLTETATDLLLPPGFNHSWLVARVGFVSMRE DGFMAHKMNVESFNLDHTKVAAPFVRVADVKHLPAGDTLTKYDVRFCQPNKEHLDMPAVH SLEHSFAECVRNHSDAVIDFGPMGCQTGFYLIMIGEPDVPGTCELVETTLRDILKLDATP AANEVQCGWGANHSIKAAQEAAHTMLNHRDEWEQVMA >gi|302034490|gb|GL383261.1| GENE 235 211848 - 213029 719 393 aa, chain - ## HITS:1 COG:Cgl0726 KEGG:ns NR:ns ## COG: Cgl0726 COG1482 # Protein_GI_number: 19551976 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannose isomerase # Organism: Corynebacterium glutamicum # 1 376 1 377 394 234 38.0 3e-61 MKRLTGTVRTYSWGSYDAIPDILGKEADGKPWAEYWLGAHETSPSTLDGIPLTDYIHAHP DELGDRSRKVFGARLPFLLKILSAYHPLSLQAHPDAAMARAGFARENQDGIGVDDPHRTF VDDWPKPEILVALSDFEGLCGFRDPHETRQLFDELEVLTPTDPVLGSLTERSGSAALAET FLNCLAGDDVRRQIVTEVVSGAVNHVGEDTPLGEFARTAVELDEYFPGDPSILAALMLNR VHLKPGQALSVPPGLMHSYLSGTGIEIMADSNNVVRGGLTNKHIDIDSLIQIVSFQTQEP RIIAAEEVDPGMRVFPGIDDQFRLWQLDLDTTCPAMMPASELARILLITDGYAVCSGSHG TDEIVRGQAVWIPAGERVQIDGDCDGFIAAAGL >gi|302034490|gb|GL383261.1| GENE 236 213073 - 213357 88 94 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3490 NR:ns ## KEGG: HMPREF0675_3490 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 94 1 94 94 123 100.0 3e-27 MSDSITPESAESAELCASDRAILDLEESWQAGSLSVDKETAIRDSLGLSSPRYHLRLNEL IDDEKAAQYAPSLVGRLQRVRSQQRRSRSAQLLR >gi|302034490|gb|GL383261.1| GENE 237 213367 - 213636 60 89 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313802580|gb|EFS43802.1| ## NR: gi|313802580|gb|EFS43802.1| conserved domain protein [Propionibacterium acnes HL110PA2] conserved domain protein [Propionibacterium acnes HL030PA1] # 1 89 11 99 99 139 97.0 7e-32 MWRERPRIVIPRDARDGRSGDLITGRTTRTGARNTNPGGSTLACRVPMTCLALTPSECKE FVSGTCPVVLPTMTTGPATSPTRLCRDGP >gi|302034490|gb|GL383261.1| GENE 238 213691 - 215325 1589 544 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 [Haemophilus parasuis 29755] # 2 544 3 547 547 616 59 1e-175 MAKLIEFNIEARRGLEAGMNTLADAVKVTLGPKGRNVVLEKSWGAPTITNDGVSIAKEIE LDDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQAMVREGLRNVTAGANPMGLKKGIE AAVQAVSARLSDMAIDIETKDQIASTASISAADPTVGEIIAEAMDKVGKEGVITVEESNT FGLELELTEGMRFDKGYISPYFVTDTERMEAVLEDPYILIVNSKISSLKDLLPVLEKVMQ SGKPLFVIAEDVEGEALAGLIVNKIRGTFKSVAVKAPGFGDRRKAMLNDIAILTGGQVIS EEVGLSLDAVTLDLLGRARQVVVTKDEATIVDGAGDSEQIAGRVSQIRKEIENSDSDYDR EKLQERLAKLAGGVAVIKVGAATEVELKERKHRIEDAVRNAKAAVEEGIIPGGGVALLQA SKAAEIEGLEGDELTGAQIVLAACTAPLKQIAINAGLEGGVVAEKVAGLPAGQGLNAAND EYVDMVEAGIIDPAKVTRSALQNAASIAALFLTTEAVIADKPEPVKAPAGGGDMDGMGGM GGMM >gi|302034490|gb|GL383261.1| GENE 239 215460 - 216536 1028 358 aa, chain - ## HITS:1 COG:all4020 KEGG:ns NR:ns ## COG: all4020 COG0176 # Protein_GI_number: 17231512 # Func_class: G Carbohydrate transport and metabolism # Function: Transaldolase # Organism: Nostoc sp. PCC 7120 # 20 209 15 209 381 76 29.0 7e-14 MKINYTPGPLLDASRTTPTALWNDSADLDELRQSIAFGGVGATCNPVIGYTTIKKHPDIW EDRIRAIAENNPTWGESQIGWQAIKDMSVEAAKLLEPIFVEHKGRNGRLSIQTDPRLHRD AKALADQAEEFSNLAPNIIVKIPCTSVGIEAIEEATYRGVSVNVTVSFTVPQAVKSAEAI ERGLQRRVAEGKPIDEMGPVVTIMAGRLDDWLKIVAERDRLFIDPGHLEWAGIAAIKRAN QIFVERGFHSRVLCAAFRNVLQWSELIGGDLVVSPPFKWQKRINDSDYHVVPRIDEPVAA EHLDALKKIPEFMRAYDPDGMTIKEFDTFGATRRTLRQFLQADADLDTLVRDIITPAI >gi|302034490|gb|GL383261.1| GENE 240 216638 - 217381 405 247 aa, chain - ## HITS:1 COG:Cgl0157 KEGG:ns NR:ns ## COG: Cgl0157 COG2188 # Protein_GI_number: 19551407 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Corynebacterium glutamicum # 12 247 16 252 253 192 44.0 5e-49 MENEPYIADITIDRSRPEPLHTQIAEPLAQLIESGELPPGTRIEDEMSMAARLHVSRPTA RRAFETLTQRGLVIRRRGIGTQVTPTRVHRSMNLTSLYDDLQASGQRPRTSVLDWTVETA PPAVAAALGLPSNSEVAHFRRLRMSQDEPLAIMTNWVPVDLAPSAEELRTTGFYDYLRSR DVVVAVGHQRFSARLALPDEARLLNEPPGAALLTMQRTACDESNRVIEFGQHVYRASIYA YENTVYA >gi|302034490|gb|GL383261.1| GENE 241 217356 - 217574 141 72 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|315093919|gb|EFT65895.1| ## NR: gi|315093919|gb|EFT65895.1| hypothetical protein HMPREF9582_00225 [Propionibacterium acnes HL060PA1] # 1 72 1 72 72 112 98.0 9e-24 MSNASDTTNQETYVNTIDNVASHPTPNTEIAARLYPDAARTIGPPLALPTNRLCVSTYPQ MRNDSGERALHR >gi|302034490|gb|GL383261.1| GENE 242 217596 - 218585 644 329 aa, chain + ## HITS:1 COG:Cgl0158 KEGG:ns NR:ns ## COG: Cgl0158 COG0524 # Protein_GI_number: 19551408 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Corynebacterium glutamicum # 10 315 9 314 318 363 58.0 1e-100 MVSSRRRDLDVLTMGRIGVDIYPLQYGVGLEDVTSFGKFLGGSPTNVAVAAARLRHSAAV VTAVGDDPFGRFCRREMARLGVYDNYVLVNSELPTPVTFCEIFPPDDFPLYFYRRPTAPD LRITPDDVPEDAVRNAQILWLSVTGLCQQPSYDAHCRALEVRGKAEHTVLDLDYRSMFWQ SAAKAHEAVSAVLPHVTVAIGNREECEMAVGESDPDRAAHALLDAGVQLAVVKQGPKGTL AMTREERVEVAPTPIDVTNGLGAGDSFGGSLCHGLLEGWSLAETIQAASAAGALVATRLE CSTAMPSEPELFAMMAKHPDIAIKEEHLS >gi|302034490|gb|GL383261.1| GENE 243 218582 - 219469 502 295 aa, chain + ## HITS:1 COG:no KEGG:PPA0457 NR:ns ## KEGG: PPA0457 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 295 52 346 346 528 100.0 1e-148 MTRTPLIDKLLDRRLADPVRFADRVRQRPRATWSPTEPLMVVAADHPARGALAAGGRADA MADREHLLERCVTALGRPGVNGFLGTADMVADLANLDALDGKVVFGSMNRGGFAGASFEL DDRMTGYDVQGILDEDLTGGKMLLRFDLSDPGTATTAQACAEAVTTLARARRIAMVEPFI SYRADDGKVVNDLSADAVVKSVVMASGLGADTSWTWLKLPAVDDMERVVRATSLPILLLG GEVSTDPEETRRRWATALAARHVRGLVLGRSVLYPPDSDVATAIDNAVQLLGVQA >gi|302034490|gb|GL383261.1| GENE 244 219466 - 220338 405 290 aa, chain + ## HITS:1 COG:Cgl0161 KEGG:ns NR:ns ## COG: Cgl0161 COG3718 # Protein_GI_number: 19551411 # Func_class: G Carbohydrate transport and metabolism # Function: Uncharacterized enzyme involved in inositol metabolism # Organism: Corynebacterium glutamicum # 7 282 6 288 296 221 44.0 2e-57 MTELVLRSGSTASGCRDVVVDPKCAGWTYSGLTIASLTKDETLELTTDDHEYLVLPLEGS FTVQGDGFRADLAGRSTIWGEVTDYAFVPRHRTITVTAVSGGRVALPNALASEDLEPRYC PPTEVRVELRGAGNCSRQVVNYAVANPVHTSRLLACEVLTPGGNWSSYPPHKHDEESQVE HELEEIYYFEIRGDEHGPGMAFHGTYGTPDRPIHVAEMISNGDVALVPHGWHGPCAAAPG YDLYYLNVMAGPGAAEWKSVDDPHYGWIRQTWQDQDIDPRLPLAVDDSKE >gi|302034490|gb|GL383261.1| GENE 245 220341 - 222239 1112 632 aa, chain + ## HITS:1 COG:Cgl0162 KEGG:ns NR:ns ## COG: Cgl0162 COG3962 # Protein_GI_number: 19551412 # Func_class: E Amino acid transport and metabolism # Function: Acetolactate synthase # Organism: Corynebacterium glutamicum # 4 629 3 633 637 607 50.0 1e-173 MTEQTVRLSVGQAIVRYLTHQYTERDGVERRFIRGVFGIFGHGNATGLGQALLQNEAAPD DEEGRLEYWMGRNEQGMVHACSAYARATNRLQALAATASIGPGSLNMVTGAALATTNRVP VLLFPSDISANRAPDPVLQQLEDPTNPDVSCNDAFRPVSKFWDRVNRPEQLMVSLPRAMR VLTDPVDTGAAVICLPEDVQTEVYDWPVSFFAKKVWYIDRRLPDRAAVVRAAQAIRAARC PLIISGGGTIYSEASQELRDFASATGIPVADTQAGKGAINWDHPCAVGGVGATGSDSANA LAAQADLIIGIGTRYSDFTTGSQTAFKNPDVTFVNVNVGAFDAAKQGAQMLVADAREALT ALSKELDGYRVPQEWSDLASAKAKAWAEVTDRCYHLGHGPLPAQTEVFGALNELMGDDDV VINAAGSMPGDLQCLWRASTPVQYHVEYAFSCMGYEIPASLGVKMALPDSEVVAIVGDGT YQMLPMELATIVQEGAKVILVLLQNYGFASIGALSESHGSQRFGTKYRQHDDGQGHVVGD DALLPLDIAANARSWGIDVLEVRTIKEFREAYRKAEASDHATMIHIETDLYGPNPPASGW WDVPVTSQSRLKSTQKAYAEYTGQVAAQRRFF >gi|302034490|gb|GL383261.1| GENE 246 222384 - 222620 293 78 aa, chain - ## HITS:1 COG:no KEGG:PPA0460 NR:ns ## KEGG: PPA0460 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 78 27 104 104 112 98.0 6e-24 MSLSYVDSGIILRTPAGMGSVMHSQAVTLLRFVPAALVLFALAIAGVINQAPILTIVSGL MTVALTITLSMMHFFDNA >gi|302034490|gb|GL383261.1| GENE 247 222619 - 222924 103 101 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|315092658|gb|EFT64634.1| ## NR: gi|315092658|gb|EFT64634.1| hypothetical protein HMPREF9578_01511 [Propionibacterium acnes HL110PA4] # 62 100 1 39 40 62 74.0 1e-08 MCDVSTPFRMPKHDRTAVLGTAVCALKIPRTVGNCPNDKHVSTIARESTQRLRGWCYFIS GMLVGTEMFWRRCERLDRRGGSAVWNRDFYLLVQITSNRLL >gi|302034490|gb|GL383261.1| GENE 248 222987 - 224480 1340 497 aa, chain + ## HITS:1 COG:Cgl0160 KEGG:ns NR:ns ## COG: Cgl0160 COG1012 # Protein_GI_number: 19551410 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Corynebacterium glutamicum # 2 489 5 495 504 508 49.0 1e-143 MKTIRQWVGGEYYEGSPLGVIPVENPATGEVTAELLQASKEDLDHTVEVARDAQKEWANY SLSKRVAIMFKMRQLVLDHQDEMARLIVEEHGKNYSDAIGEIQRGRETFDFATAINVALK GEYSHDVSTGVDIHTTRQPVGVVAGICPFNFPAMVPMWMHPLAVATGNAFILKPASPTPS ASLLTAELYKEAGLPDGVFNVLSGDRRSVQDILVHPGIDAISFVGSTPVAHIVQDTGVSH GKRVQALGGANNHAIVMPDSDLDFAAQHISASAFGAAGERCMALPVVVAVGGCGPQVAEK VKKHAEAIKVGEGMGEGVEMGPVISAKAKDRIVGLIDDAEKRGSKVVLDGRGLTVPGYEN GHFLGPTVLDDVPLDAPVYTEEVFGPVLAIVHADTYEEALKIVNAQPFGNGSAIFTNDGG VARRFTLDVEAGMVGVNVPIPTPVAFYSFGGWKESLLGDTHIHGPEGVTFYTRAKAITER WPTEKTYAATMSFQREE >gi|302034490|gb|GL383261.1| GENE 249 224576 - 225556 491 326 aa, chain + ## HITS:1 COG:CC1627 KEGG:ns NR:ns ## COG: CC1627 COG1609 # Protein_GI_number: 16125873 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Caulobacter vibrioides # 5 324 3 330 335 102 33.0 8e-22 MRNPTQTDVARMDGVSRGLVSLALAGRPGVSSATRRRLQDAADRLGYSRDLSAASLATGS SPVLGIILPNLRNPFFETVVSYLSVAAERVGWLPLVGTASDDTRHEEAVLRRFREFRAVG VIVVSPVGDLESLAALSGPTSPLVLLGAENQSGVVPCVHVDEDTAAQLIVEHLGSQGVRR VVSLAEECGSGMVWVLRRRAALIAACQSAGIECVPAIVERGEAVAPILARFIDDAQTDVG VVAHNDVVALDALSVLRSVGLESRRWIPVVGFDDTHLASRPEFDLTSVNQQPGALVDVAL DMVAGAVRGLDHTVEPRLVVRSSSKR >gi|302034490|gb|GL383261.1| GENE 250 225693 - 226175 112 160 aa, chain + ## HITS:1 COG:Cgl0171 KEGG:ns NR:ns ## COG: Cgl0171 COG0673 # Protein_GI_number: 19551421 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Corynebacterium glutamicum # 12 134 3 124 411 103 52.0 2e-22 MSALSQPATSQRHPLSVAVIGAGMAGRTHANAWRQVGTVFGSEGIPPIRLAAICDSYEPF ARSARDSYGYERAVTDWHDIVDADDIDVVSVVVSNALHRQVAEDLVRAGKHVLCEKPLSD SLENARAMAELEARHRRRLQLPTPPLSRCNSRTGATRPSR >gi|302034490|gb|GL383261.1| GENE 251 226234 - 226896 471 220 aa, chain + ## HITS:1 COG:Cgl0171 KEGG:ns NR:ns ## COG: Cgl0171 COG0673 # Protein_GI_number: 19551421 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Corynebacterium glutamicum # 1 217 178 399 411 165 43.0 6e-41 MAWRYRGPQGSGALGDLGSHIIDVAEFVCGPIRSVRGGAFATIIDKRPPALEGVAGGRGM TVSAQAIETVENDDIAVFNMTFESGAIGTIVVSRVAFGLPNSMEFDVFGTQGRASFDLAR SGEIIVDDTSTPEGFSGPRQVLSNPTFPYYKGGSSMDFAGVGSTQIEQFTYQARAFLDQV LGLDEEFPLVPSFAHGYRTMCIADAVARSAAAGGKTIDLT >gi|302034490|gb|GL383261.1| GENE 252 226941 - 227939 541 332 aa, chain + ## HITS:1 COG:Cgl0172 KEGG:ns NR:ns ## COG: Cgl0172 COG1082 # Protein_GI_number: 19551422 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate isomerases/epimerases # Organism: Corynebacterium glutamicum # 3 332 1 331 337 299 46.0 5e-81 MSMNIGAYTACLHNYDLAEALDILKTNGLTGVEVNVGGFIPSPHCPVDTLMTSQTAREDY MGIFEDKEMRLAGLNTSGNPLSPLPDVGPRHAYDLRRAIELAGKLGITDLVCMSGTPGSD RHAKYPSWVVNPWNGVELEVLEYQKSVVDPFWREMDLRAQDAGVKLALELHPHNLVFTPV NFLEFAERIDARNIGVNMDPSHLMWQGMDIIAAIELLGDHIFHVHAKDTVILPGIATRGV LDSSFGPVPDDPDVRVQTGMEHYCSSWPSDPAWRFVAIGNGHDVTWWTNFLRAIRDVNPG MNINIEHEDQSLAQLDGIAVSARNLLAAEQAV >gi|302034490|gb|GL383261.1| GENE 253 228011 - 228877 685 288 aa, chain + ## HITS:1 COG:BH2310 KEGG:ns NR:ns ## COG: BH2310 COG1082 # Protein_GI_number: 15614873 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate isomerases/epimerases # Organism: Bacillus halodurans # 4 287 3 285 294 270 42.0 3e-72 MVDIALDPNMYYCSMSTADTLRKAADLGFRYVELSPNEEFHFWHRYPKADDAFVTEMRKA VRETGVTIRTLNPVFNWSSPDEAERRNQMRNWRRLLELADQLDVHEITSEFSGDPNSPRE CEAAWYRSIEELAPSFERYGIRLNMEAHPYDFIELHDDACRTVRGTNLDWIGYEYCCPHT FHLSNGAGDVRRMIHGCADRLREVHVADAFNHAAHDGNRYIINPPGADVRVHQHNEIGLG DVPFDDVFEALRDVGFDGVMSVCVFGWHERADEINKSMLARLNREFVA >gi|302034490|gb|GL383261.1| GENE 254 229087 - 230298 659 403 aa, chain + ## HITS:1 COG:BH0710 KEGG:ns NR:ns ## COG: BH0710 COG0673 # Protein_GI_number: 15613273 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Bacillus halodurans # 10 392 3 385 388 223 34.0 6e-58 MGVVMEKRRTIGVGVVSLGWMGRLHTRAYKALAEKFPEIDVNIRLVSCCDVVAENRRQAV DRLGFCTAVEDYHDLIGNPEVDVVSICAPNFLHRDIALAAAEVGKPFWIEKPMGTNAKQS RQIAEAAEAKGLVTSVGFNYRHTPSIEFARQLIADGRLGTVTNARAWLIADYASDPHGPL TWRYDRERAGAGVILDLMGHGEDLVQYLLKGRFTEVSAVSETFIRQRPKPLKEGIGHTGW VVSDELGPVGNEDYCAVIARMENGVMCTLESSRVSVGPRAEYIVEIYGTDGSIRWNFEDL NHLQVCLGRNNRALQGYVNCMAGPDFPEFMRFQPGAGTSMGFDDMKVVEAAKFVRGVLDG QQYGPSVADGWASAEVNDAIVASCGDHAWHDVKPVSGRTTFDK >gi|302034490|gb|GL383261.1| GENE 255 230447 - 232054 1569 535 aa, chain + ## HITS:1 COG:BS_yfiG KEGG:ns NR:ns ## COG: BS_yfiG COG0477 # Protein_GI_number: 16077893 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Bacillus subtilis # 11 527 17 460 482 331 38.0 3e-90 MVDETPPSGKHRGIGALAAVATLGSLLFGYDTGVISGALPYLYMPHLAGGLALTPMQEGA IGGTLLIGAAIGAVTGGIMSDRWGRHHNITILAVIFLLGALGTTFSPNVFVMYVFRFVLG FAVGAASATVPVYLAENAPKRIRGSIVAIDQLMIVTGQLLAFSMNAIINAAHGGPQLIIK ANNNPDSLGITKGTYSWDQILALQASKGGPLEGDQYRAFVENLVIQSGNGAAWRWMLVLC SIPAIALWIGIRLMPESARWYLAKGRVADAVGALKRVRDPQKDGPLDAEVEEMHVTQQRE LENKYQGNAFAHVWRTPWLRKLMLVGIFLAIVNQTTGVNTVMYYAPKVLEYAGMTTSASI TAQVANGVMSVIGSVGGLWLILKFSRRSLLIFDVSAVGITLLVIAGTFQFTIAPHIADKT TPPTWAPYLILGLMAVFMLIVQSTNGTVVWTMLGEMFPANVRGIMNGTAIFFMWVINAVI TFTFPSMMASLGGGLTYTIYGMMNLVIAVVLFKIMPETRNKSLEQIETYMEERYS >gi|302034490|gb|GL383261.1| GENE 256 232342 - 232566 64 74 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|314964367|gb|EFT08467.1| ## NR: gi|314964367|gb|EFT08467.1| hypothetical protein HMPREF9618_00320 [Propionibacterium acnes HL082PA1] hypothetical protein HMPREF9584_00100 [Propionibacterium acnes HL092PA1] hypothetical protein HMPREF9579_01008 [Propionibacterium acnes HL087PA1] # 12 74 12 74 74 126 100.0 5e-28 MTLLLPALLAPCAHPVRKGHPCHGNTQRLKGDLDATAIRNLEYFLPSVLHDGVDGMSDAR PLSSVFDVDGNDGV >gi|302034490|gb|GL383261.1| GENE 257 232663 - 233526 780 287 aa, chain - ## HITS:1 COG:AGpA635 KEGG:ns NR:ns ## COG: AGpA635 COG1082 # Protein_GI_number: 16119662 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate isomerases/epimerases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 286 3 306 307 137 31.0 2e-32 MKIAGAPISWGVCEVPNWGYQMTPERVLTEMKQIGLTATEFGPQGWLPIEAEARATEVKK YGLKPVGAFFLSVMHDPDFDPIPMVNKELDAFEAAGGDYLILATDSGRDGYDDRPVLDEA GWKTLFTNLDQIREVCASRNVTACLHPHWGTMVQNRDEVIRVLENSSIGLCLDTGHLACG GTDVVELVRKYANRVDIVHAKDVHKEMADKLLPGEITWSEGIRAGMFAPIGDGDIDFAAI VRLLDEAGFDGYYVLEQDIMIDEEPPADDGPIINAKKSYEALASLGR >gi|302034490|gb|GL383261.1| GENE 258 233504 - 233689 82 61 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGAPAIFIDVLLVSWRPELLCIRPLSVVYVLSNSGAIAVAGVGIGIDDGLCANIRESCRY W >gi|302034490|gb|GL383261.1| GENE 259 233724 - 234710 790 328 aa, chain + ## HITS:1 COG:Cgl3002 KEGG:ns NR:ns ## COG: Cgl3002 COG0673 # Protein_GI_number: 19554252 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Corynebacterium glutamicum # 2 328 3 330 335 329 53.0 4e-90 MIRIAIIGAGRIGHVHARAIQGRNDVTLALVCDPFEQNARALAGEYDVRYCLDPDEVFDD STIDAVVIGSPTQFHVDHILKAVNGGKRVMCEKPIALDVESAKRCINELGDRADQVMMGF NRRFDPTFSALKSRLDDGEIGSLQQLTVISRDPAAPSASYIAGSGGIFKDMTIHDFDMVR HFLGDIAEVNAVGTNVSPEIAEQGDFDQVIVTLKSRDGKLATIINSRTCAFGYDQRLEAF GADGMLSADNLTDAAVRMATSTQTDAKTAIMDFFLERYEDAYRIELETFLDSIAIGGAVS PSVRDGYEALVLADAATRSAQEHRVVAL >gi|302034490|gb|GL383261.1| GENE 260 234916 - 235725 429 269 aa, chain + ## HITS:1 COG:CC2538 KEGG:ns NR:ns ## COG: CC2538 COG1266 # Protein_GI_number: 16126777 # Func_class: R General function prediction only # Function: Predicted metal-dependent membrane protease # Organism: Caulobacter vibrioides # 95 245 130 285 309 93 41.0 5e-19 MVILGVGQAGFDLVLTALVGGHPDAQTSTILLLASFAGVWLVLWAWMRFVEQRPMSCLGF RGPGSDVWIGVAIAIAILAIDVVVMTVSGQVTMSWARPSIMAAVSIVAAILLFLVQGCAE EAVLRGYLMQSVAAKWGIPAGLAIQAVVFAALHGANPGTTWVALVNVTGFGLMQGLLVVW RGNLLAAMGFHTVWNWLQGMVLGFDVSGLELHHSVMTTARTTGSHSWLTGGTFGAEGSVI NTIVLAILITCFLVTMRHDWRDNEAYGIA >gi|302034490|gb|GL383261.1| GENE 261 235712 - 236398 418 228 aa, chain + ## HITS:1 COG:ZcutCm KEGG:ns NR:ns ## COG: ZcutCm COG3142 # Protein_GI_number: 15804982 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in copper resistance # Organism: Escherichia coli O157:H7 EDL933 # 1 209 1 204 248 92 36.0 7e-19 MALLEVICLHEHDAKRAAAGGADRIELVGTMDDGGLAPSPELLARTLSAVHIPVRPMLRL DGGFRADPRRRDEILRLASAYRDLGADGPVLGFLDEATGVDVETVIELTEGCQRWTFHRA IDNCLEPDKGWAQLLGLHGLDQVLTAGSPRGVEHGLDDLIARASADLRVADLIMAGGGLR AEHVPWLYRAGVRAFHIGSPARPQGSWKAWVDADLVRSWRDLLDRLAG >gi|302034490|gb|GL383261.1| GENE 262 236412 - 237416 746 334 aa, chain - ## HITS:1 COG:no KEGG:PPA0472 NR:ns ## KEGG: PPA0472 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 334 1 334 334 625 99.0 1e-177 MSGKALIARRTALGGLLVATGAAIGVPVVRATNRPQKKAPRKPVPTTVTSPAAPGPYVPF PYQDELSTYLNTRDGEQSVAMRVHGQREIQVFNHGATTYITASIIKLAIMETVMIQAVGE KRQLTEGEKNLLVPMIENSSNDAATALWKKVGKADGVRTAMRRMGATHTTFDPEGRWGLT STTAADQVALTDHIFCPNTIIPESMRAYARELMSNVEDDQNWGMTAGMKSPFVKNGWLSL DDGWHVNSVASTGTAGYTVVGLTHSATASMDDLVETIEGMARIIARHQPRSVTTPSSSTA PTQTTAPKPQGVEDDHGHVSFRAPGTRDIWIQAF >gi|302034490|gb|GL383261.1| GENE 263 237460 - 239118 1139 552 aa, chain - ## HITS:1 COG:Cgl0793 KEGG:ns NR:ns ## COG: Cgl0793 COG1061 # Protein_GI_number: 19552043 # Func_class: K Transcription; L Replication, recombination and repair # Function: DNA or RNA helicases of superfamily II # Organism: Corynebacterium glutamicum # 6 545 6 548 557 765 69.0 0 MTSVPGPLIVQSDHTLLLEVDHPQADECRHAIAPFAELERAPEHIHTYRLTPLGLWNAMA AGHDAEQVVDILMRYSRYPVASGLLIDVTETMSRYGRLRIEKHPTHGLVLVSTERAILTE VLRSKSVRGLVGNQIDDETAVVHPSQRGTLKQALLKLGWPAEDLAGYVDGEHHDIDLDED GWSLRPYQKVAAQSFWDGGSGVVVLPCGAGKTVVGATAMSLARCTTLILVTNTVSARQWK EELVRRTSLAPDDIGEYSGSRKQVRPVTIATYQVITTKRHGVHPHLELFEARDWGLVIYD EVHLLPAPVFRMTADLQARRRLGLTATLVREDGHEDDVFTLIGPKRYDAPWKEIEAQGWI APADCVEVRVSLSESDRMACAMAEPDVRYRMAATLPIKNKVVRDLVERHRGQPTLVIGQY VDQLEELAAELKCPIITGSTTPTRRQEIYQDFREGQIDLLVVSKVANFSIDLPSAEVAIQ VSGAFGSRQEEAQRLGRLLRPKEGLVARFYAVVSRDTVDTDFASHRQRFLAEQGYSYRII DADDLDALDRTA >gi|302034490|gb|GL383261.1| GENE 264 239750 - 241879 1117 709 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3517 NR:ns ## KEGG: HMPREF0675_3517 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 709 1 709 709 1240 99.0 0 MSPSEEPTTLASTIRNLDAQSLSRLLTLRPDLANPTPRDLTEVSSRASTHASIIAAISSL DRWRLSLLTALAALGDLRFTELAEALCQGWPIKPEAIQADVADGISDLLNMALVLEDSGQ LHVIQIVTAHLSGYPAGLAPASVLPMNPNEVAEKLAAAGSKARSVLERLVWSPTGHVPNA RRAVTPATATTPVETALAHRLLRPLSDDTVILPREVSLMLRGNRLFAEQPSPTPPPWSEP HQTNLVNRAGLGTALEAVSAMSALLEAMERHNCALLASGGIAKRDARIVLSRVAPGDDGW VYLALAAAGGLIGADGRSWLPTPLADRWRTDSLWGQWVSLREAWRHIPQLPGNLGNALDA SAPATAQAWRRLIHRELHSAEPGTPIETKVIANRIRWRQPGTTVDDSLVEAVLDECRVLG MVALDARTDLVDARTCADMPERTDEVILQSDLTAVAPGPLTPDTAADLALLADRESTGIA GVRRFNRSSLRRALDAGWTGERVRQWWAEHSLGDVPQSLLVLLNDVVRDHGRVSVAAAGA LLEVDDPATVEAILRSSLTTDVGLRRVGPQVLVAQAEPDQVLAGLRQLGMSPVARDAHGD VFSAPPPPRAKVDVPASSAPQADPEELAASLLDKRGRGFSDRRQLIAQLHQAQQDGTWMY IERVVDDGTSVRQTVRIMAATAGAVRCVIRGGGGVTIVPVSRITSCQPI >gi|302034490|gb|GL383261.1| GENE 265 241876 - 242631 340 251 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3518 NR:ns ## KEGG: HMPREF0675_3518 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 251 1 251 251 431 99.0 1e-119 MARSITAPVDVVDSRPAPRAFQAPRADPLETPTQPVNPAAGKPCSAPHHYQGGDHRPLTE LIPRRRSSRQPLEPFSTQAGLTGPRIEHHDPHEPIRTSRLTSGYSTWSAPTEAPVSTTPP PRIKSVRMPSRLDPRTPSKAGSRSFLDLCQGLGWPWIVVLVLGCAWSPLSIPALFITWWL AWRHPFAAGRLTKALTAVTVAVIIGGAIESPVRTVLAQFAWMSRLGCVIMLGLGFILIDR QLTPDDPGSSR >gi|302034490|gb|GL383261.1| GENE 266 242805 - 243590 697 261 aa, chain + ## HITS:1 COG:Cgl2592 KEGG:ns NR:ns ## COG: Cgl2592 COG0363 # Protein_GI_number: 19553842 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase # Organism: Corynebacterium glutamicum # 1 248 1 245 253 235 52.0 7e-62 MEVIICSDEQAVGRIAADRIAKVLGRAKAPVLGVATGSTPLTTYSSLAALAAEGKADFTD LRAFALDEYIGLPADDERSYAATIRHTVTEQLGLDPANVHTPDGMADDLNAACAAYETAI QEADGVDVQILGIGANGHIGFNEPTSSLSSRTRVKTLAERTKADNARFFEEGEKVPSHCV TQGLGTIMDARNVVLLAIGANKADALAGAVEGPVSAMCPASVLQFHPHVLVIADDAAASK LTMAEYFRWTDSQRGDLSGAM >gi|302034490|gb|GL383261.1| GENE 267 243737 - 244120 387 127 aa, chain + ## HITS:1 COG:MT0893 KEGG:ns NR:ns ## COG: MT0893 COG1278 # Protein_GI_number: 15840284 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Mycobacterium tuberculosis CDC1551 # 1 126 1 134 135 125 51.0 2e-29 MPTGKVRFYDATKGFGFLTKDGGGDVYVNASALPAGVNTLKPGQKVDFGIVEGRRGEQAL SLQIIETPASLSKASRKKPQDMAVICEDLIKMLDKMGNGYRHGRHSDSRTAGAVAKMLRA VADELEL >gi|302034490|gb|GL383261.1| GENE 268 244120 - 244920 483 266 aa, chain + ## HITS:1 COG:no KEGG:PPA0478 NR:ns ## KEGG: PPA0478 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 266 1 266 266 514 100.0 1e-144 MTQVTSKPRTATRTIKADATIAKAVDQAREAAEYRAGDFGVGEHVGTIAEGERVLTHLFE CPHPGYRGWRWAVTMSRALRGRNVTVNEVVLVPGEDSLLAPPWVPWRDRVRAGDIAAGTL MPTADNDPRLEPGYTGGELAADEDPAEWAATRAVASELGLGRERLLSREGRDSTAERWLA GEGGPDNATSHHAPASCVTCGYFVRLQHSLGRVFGVCSNEYSPSDGSVVHVDHGCGGHSD VVEKRRGIELPEPVFDTISVDESLFD >gi|302034490|gb|GL383261.1| GENE 269 244958 - 245230 295 90 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3522 NR:ns ## KEGG: HMPREF0675_3522 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 90 1 90 90 169 100.0 3e-41 MTCHNNVAGHYDGAVSNHHLLTQANVAPVDENGVTVGIVGTIAFAVASLICWIMLDRLTE TGYRDWLWICLTGTGLGVVGTAYCWQRSRH >gi|302034490|gb|GL383261.1| GENE 270 245354 - 246757 1359 467 aa, chain + ## HITS:1 COG:Cgl0801 KEGG:ns NR:ns ## COG: Cgl0801 COG2252 # Protein_GI_number: 19552051 # Func_class: R General function prediction only # Function: Permeases # Organism: Corynebacterium glutamicum # 1 465 7 453 453 301 46.0 3e-81 MAYILALNPLIIGTAADKNGKLLNGAPKFLDAAGTSLNTAGIDDNKIMVMAVTAFVAAIM TIAMGVWGRFPMGIATGLGINSLLAYVVAPTMTWSQAMGLVVWEGIFILVFVLTGVREMI FRAVPNSLRSAISVGIGLFIAFVGFVDSGVIRPGSGTPVTLGVGGSLEGWPILLCLFGFL LLVVLHQRHIKGSMLIAIIGTSLVGVAIEAVGNIGAQSDKNPTGWALNVPRLPGASDFRW PDLGLLGHVDLFGGFLANGHFRIGVFLGTLLVVFSLMLADFFDTMGTVVAIGDHAGLLDE TGNPEHLKGILVVDALAAVAGGLGSASSATGYVESAAGVGEGARTGIASIVTGLGFLLAM FLSPIVSIIPSEAAAPVLVFVGFLMMAQVTRIDWKHVEEGLPAFLGMVLMPFAYSITTGI GAGLIMFCITKVIAGKARSVHPLLWVVALLFVVYFSQTLLMKLFGQL >gi|302034490|gb|GL383261.1| GENE 271 246732 - 247442 329 236 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3524 NR:ns ## KEGG: HMPREF0675_3524 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 236 1 236 236 466 100.0 1e-130 MGGLRFNAIAIDEVRDIFGADEGLAMKLRRWAEARFSVPVHHHRRPRWRSPFHPLYKPNV ECSMLPTGWPTPHDVEDLVCGRYIESDRSARCWRLVNEWLTHLSWGWTEIPMSVARFEEL DRDLAAAGLPSTYSLKRLMDEDPQIPLRPAPGMKIGYAGTRQILATWVELSEVIGTVPIA RRGEVNAVLKFLSSYPGWNHLAVDLGRPAPGLLVVWQPDTVEDAHPTGLRAGRTAS >gi|302034490|gb|GL383261.1| GENE 272 247585 - 248589 622 334 aa, chain + ## HITS:1 COG:no KEGG:PPA0482 NR:ns ## KEGG: PPA0482 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 334 7 340 340 588 99.0 1e-167 MAGCNIVTQRSRTRRRASRAASALLALGCAWGLSVSPAAAADFTVRTDKKLGKPVGMAAD LHHDWYWITDGSSSTVHSLLAVDKTGKEVHRVVWEPAFHDVEAMSWARGVLYVADIGDKK AQRRGIRVMSPTSTAAKQSTYYEWMFTYPDGAHDAKALTVSPKGSFYIITDGPHPAIYRG GPQVSRTESNPLEKVADAPAGVKDATFLPDGSRMALLTDHEVRIVDAYSWKTVANAAFSG GQAIATDTTQKTLEIATSGNKVRGIKFPTTLTSITPTPSHSPKAKVVTPANGKPTSKARS GTFIAVMGAVVVALCAGVVTFFYGRSRDTTWRHR >gi|302034490|gb|GL383261.1| GENE 273 248586 - 249749 722 387 aa, chain - ## HITS:1 COG:ML2136 KEGG:ns NR:ns ## COG: ML2136 COG1932 # Protein_GI_number: 15828146 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoserine aminotransferase # Organism: Mycobacterium leprae # 13 384 3 374 376 391 53.0 1e-108 MNSAVIDDMICKDRIMAQPMIPRDLLPSDPRFGCGPSRIRREVVASLSEPGSVMGTSHRQ PPVRHVVAAIREELTELYNLPTDYEVALGNGGATLFWDMATVSLVEKRAATGVYGEFTRK FSSALQRAPFLADPAVFQAEPGKLALPKAVSDVDTYAWAHNETSTGVVAPVRRPNDIDDN SLVLVDATSAAGGVAADMSTIDAYYFSPQKNLSSDGGLWLAILSPAAIERSNRVTSSARW VPQMLDLSLAVTNSRADQTLNTPALATLVMLEAQCRWLLDQGGMAWAASRTASTSGILYR WAEDNPLTTPFVADPALRSPVVVTIDIDESVDAARLCARARDNGILDIEPYRKLGRNQIR IATFSSIEPSDVEALTACLDWLLENRD >gi|302034490|gb|GL383261.1| GENE 274 249797 - 250927 740 376 aa, chain + ## HITS:1 COG:lin2213 KEGG:ns NR:ns ## COG: lin2213 COG1820 # Protein_GI_number: 16801278 # Func_class: G Carbohydrate transport and metabolism # Function: N-acetylglucosamine-6-phosphate deacetylase # Organism: Listeria innocua # 20 374 18 378 380 205 35.0 1e-52 MITRIASHHVVDRDGSDSPATITVEAGRISDVSEGIDPKAELVDEWILPGYVDTHCHGGA GADFTDPDREAALRAVHYHRSQGSTTLFASTVTAAIDDVVAQIGRLRQLVDLDEIAGIHL EGPFLAESRKGAHAVELLCDPDPVSVGRLIEAGGSALKMVTIAPERAHGLEAVTTFTTAG VHAAIGHTECDNTTASAAVDAGADVITHLFNAMPSIHHRKPGPVPPMLTDSRVVCELICD GVHLAPDVIRMAMSSAGPKRIALVTDAMSATGQPDGDYILGSLPVKVVDGRARLLAADGS LGAIAGSTLTMGRAVEFVTSVVGIPLGQVAVMAATTPAKLHGLNEVGVIEEGHWADLCLT DAKGHLVRVIHRGEAV >gi|302034490|gb|GL383261.1| GENE 275 251081 - 251779 433 232 aa, chain + ## HITS:1 COG:MT2784 KEGG:ns NR:ns ## COG: MT2784 COG1321 # Protein_GI_number: 15842249 # Func_class: K Transcription # Function: Mn-dependent transcriptional regulator # Organism: Mycobacterium tuberculosis CDC1551 # 3 206 2 203 230 176 51.0 3e-44 MSSELVDTTEMYLRTFYELLEEGVELRRARIVERLHQSGPTVSQTVARMERDGLVVVESD RSISLTQEGHDVAQTVMRKHRLAECLLTQIIGLRPDLVHDEACRWEHVISGEVEKRLTGL LENPDVSPYGCPLPPEQAGCRPDGSARFRDDSKPLDEVIAETGCPVSVTVTRLSEFFQAT EGNLADVYAAGLLPGKSVEVDDDADGIRLTGPSGSIVVDPEILSGLFVAQNS >gi|302034490|gb|GL383261.1| GENE 276 251800 - 252879 590 359 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3529 NR:ns ## KEGG: HMPREF0675_3529 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 359 1 359 359 704 99.0 0 MGVPQVVCPSQLPDLDQIAALCESGWYDTADSMLRMAHASESANPHVVQAAGVMAVARRV LALDAEDFEDIGEALPADLRSRLVDSGFPHHPRAAERGALGDLIPLYELMLEVLDIRMRR EEPQQVVVTCHILGEYLAQLAWQPVLGDGGDPLTLPGKVGQKWGGDGQGCAHTSAMNATA RRSMHAAQGDEEGYTSYLDKFHSRLGEALGVCAMNHATIDAGERPDVGITCPDPCRWVLA GTWEERRALDARVRLARIFQESGLVALRHHAPVGHFFGVPSGSEIGNAWVMTWNKLNEQW ADGSNPMLDPSAPGYDVDASDGALPGLARMVSVIAARPIRAGHLLRDLGVTAIAELKAV >gi|302034490|gb|GL383261.1| GENE 277 253001 - 253366 335 121 aa, chain + ## HITS:1 COG:Cgl2917 KEGG:ns NR:ns ## COG: Cgl2917 COG0526 # Protein_GI_number: 19554167 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Corynebacterium glutamicum # 1 118 1 118 124 130 49.0 5e-31 MATVALTKDNFSSTIDSNDVVLIDFWASWCGPCQRFSPIYEDASGRHSDVTFAKVDTEDQ QELSAGLEITSIPTIMAFRAGYLVFRQSGLLQGRQLDELIEKVKEIDVEDLKKQAAAQNQ G >gi|302034490|gb|GL383261.1| GENE 278 253262 - 253453 145 63 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTKHRPTAGRYHLPPALSSAFQLGMESPVSALVLGRGLLLEILDVDLLDLLNKLIKLATL QQA >gi|302034490|gb|GL383261.1| GENE 279 253538 - 255154 1180 538 aa, chain + ## HITS:1 COG:BS_yfiG KEGG:ns NR:ns ## COG: BS_yfiG COG0477 # Protein_GI_number: 16077893 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Bacillus subtilis # 26 535 24 465 482 313 38.0 5e-85 MTSRIEVAELVETTQPAGPKRRMGVVAAVATLGSLLFGYDTGVISGALPFMYLPHGAGGL ALTVGHEGAIGGTLTLGAAFGGLIGGMMSDRWGRRHNLLILAVLFVVGALGTAGAPSVWV MYPFRVVLGSAVGAASATVPVYLSETSPKRMRGRIVALDQFMIVFGQLLAFSVNAAISAA HGGPSLMVTADPTGRLSPGTYSWDTLQAMTTSHGGAMTDQAFHAFLTQLSVSAGSGGAWR WMLVVCTLPAIALWIGMRKMPESARWHLSHGQLRETVACLKQVRVEGVDEPIVDEVTEMV ELNGEGGRLSHRQQWAVVMESRWTRRLLLVGIFLAVVNQTTGVNTVMYYAPKVLEFAGMS TQASIISQVANGVMSVIGAAAGLWLIERFDRRHLLIFDVTAVGVCLLGIAATFGLAIAPH VGQGVPKWAPILVLVLMSIFMLIVQSTNGTVVWTMLGEMFPTRMRGAMNGAAVFCGWLAN ATITWTFPAMLAGLGGAGTYLTYGLVNLMIALVLVKVMPETKGRSLEEIEVEMKQRYA >gi|302034490|gb|GL383261.1| GENE 280 255151 - 255357 97 68 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVQAALPDYSSKALYGQGPVAQGIEQWFPKPCVVGSNPIGAAVQTASDRGNPPQSRFPGR IELYWTAP >gi|302034490|gb|GL383261.1| GENE 281 255461 - 255715 119 84 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313831952|gb|EFS69666.1| ## NR: gi|313831952|gb|EFS69666.1| conserved domain protein [Propionibacterium acnes HL007PA1] # 27 84 1 58 58 84 96.0 2e-15 MATGSTPASVIFWRAAASPSSLILAPLRVNERRHCTEKMYREEPTDRPEHATTSSVRQVA RTTSSSADRDNLPSPTRVKTGYSG >gi|302034490|gb|GL383261.1| GENE 282 255648 - 257045 1373 465 aa, chain + ## HITS:1 COG:SPCC1322.04 KEGG:ns NR:ns ## COG: SPCC1322.04 COG4284 # Protein_GI_number: 19075632 # Func_class: G Carbohydrate transport and metabolism # Function: UDP-glucose pyrophosphorylase # Organism: Schizosaccharomyces pombe # 69 461 107 497 506 251 37.0 2e-66 MSEEGLAAARQKMTEAGVDPVAIEVFTSYYHQLETGDTGLIREDTISPLTNPPMLDDVEV SEEQAAEALDKTVIIKLNGGLGTSMGLDRAKSLLEVRDGKSFLDIIATQVLSARKTFGAR LPLMFMNSFNTREDTLKALEKYPELAVDGLELDFLQDQEPKLDAETLAPVEWPKDSSLEW CPPGHGDLYTALLGSGVLDHLLEAGYQYASVSNGDNLGAVPDGRLAGWFAASGAPYAAEL CRRTINDKKGGHLAIRKSDDQLILRDTAQTAEEEMDYFTDEHRHPFFHTNNLWFDLEALK KVLDERHGVMGLQIIRNEKTVDPKDSSSTPVIQIESAMGGAIEVFEGATCICVHRSRFLP VKTTNELLLLRSDVYDLDDSDHLVKTTDMTCAVDLDKDFYKKIGDFDDRIPEPPSLRRAT SLKVKGDWTFGSEVVVAGDVSLDTEKPQTIPDGTVLTGEVLGAKK >gi|302034490|gb|GL383261.1| GENE 283 257072 - 257413 66 113 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3535 NR:ns ## KEGG: HMPREF0675_3535 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 113 1 113 113 202 100.0 4e-51 MAAVLTGQRLTAPDNPGWQAVDVVEWLAEEGWPANRLANRRAEFQQAGRSWPGPIPDDLS PGLEFARYGAVLAQARRIAGLDGLTATVHRGAVVIGPDEARLLAERPPHSLLH >gi|302034490|gb|GL383261.1| GENE 284 257436 - 257804 481 122 aa, chain - ## HITS:1 COG:DR2422 KEGG:ns NR:ns ## COG: DR2422 COG1970 # Protein_GI_number: 15807411 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Large-conductance mechanosensitive channel # Organism: Deinococcus radiodurans # 1 121 2 128 128 86 37.0 1e-17 MKGFKDFLMRGNLIELAVAFILGGAFSTVVKSFTTIIMDLIGKLGGTPNFSGWVPGGVHV GAFITDVISFFVMSFVIYFGLIKPIELATEKLKRTKDEPVAAPTTADLLIEIRDELRSRP VK >gi|302034490|gb|GL383261.1| GENE 285 257905 - 258480 298 191 aa, chain - ## HITS:1 COG:no KEGG:PPA0492 NR:ns ## KEGG: PPA0492 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 191 29 219 219 259 99.0 6e-68 MVARHRRGLAALLAALAVLLVASPGMATSSSGREVIVAAHAIEGGRVIQRSDLHTVRIDP GVLPHETATLAQVEGRQASIRITEGTILTSSAVLSGSAVGSGKALVGIHLADSSMVGMLQ VGQRVSVVSPSEDGTPHVLTRGAIIRSLPTSGGGLIQGSPSTELVVVSTGSADAAAIAVA GQGQPLGLVVE >gi|302034490|gb|GL383261.1| GENE 286 258641 - 258943 158 100 aa, chain - ## HITS:1 COG:MT1020 KEGG:ns NR:ns ## COG: MT1020 COG2331 # Protein_GI_number: 15840416 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mycobacterium tuberculosis CDC1551 # 1 61 8 68 117 72 55.0 3e-13 MPTYQYQCNDCGRDLEVVQRFSDPSLTICPSCEGDLRKVFSAVGVVFKGSGFYSTDNHTK GASKAATGDSSSPTASEPSTKSEPASSSSSSTAKASESAS >gi|302034490|gb|GL383261.1| GENE 287 259021 - 259530 405 169 aa, chain - ## HITS:1 COG:ML0181 KEGG:ns NR:ns ## COG: ML0181 COG0212 # Protein_GI_number: 15826993 # Func_class: H Coenzyme transport and metabolism # Function: 5-formyltetrahydrofolate cyclo-ligase # Organism: Mycobacterium leprae # 18 161 43 186 197 88 37.0 5e-18 MSRDDRRTEHAMSRLLWAHKVALYLSRGDEPDTVDLADTLIMMGKKVLAPVLTDGHGRSL HEPAWAWYDSKNVRTGLWQIPEPIAPILPASAIDQVEVVLCSALFVDRSGYRVGVGGGWY DRVLAHRADDVPVWAVVNDDEILDEVPHDPWDESVTAALTPSGLHMLGQ >gi|302034490|gb|GL383261.1| GENE 288 259718 - 261025 580 435 aa, chain + ## HITS:1 COG:PM0694 KEGG:ns NR:ns ## COG: PM0694 COG0303 # Protein_GI_number: 15602559 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin biosynthesis enzyme # Organism: Pasteurella multocida # 44 355 20 318 406 102 28.0 1e-21 MALFHRKKQVEAPEPEAEPLGLPGAPETDMSGRRSVDDHRDYLCSLVQAVPPVAVEVPRA VGLAVCEDVHAPHDVPVVTTAVIDGYALDSASTRMAGRPDAVEIQVDRRPPSPVIPGTAV RVMAGSLLPEGTDCVLPPDLLNVDGDIVLFSPVKRWAGARLAGSDYGRGEVLVRNGTILH PGIISVLASAGIDEVFVRPRPKVVIVAVRADEDQRAEIERKARANGGEDIASLDATAAAI ESATRALDVNVTVVSTNTSSDSELTRLLANAGRGADLVIATSDRIVVGQQDPVPSVLPPM GGTDFARVAMEPGANQVFALIDPGLVPLIVLPVGPGPALVSFMAFVQPLLRKLSGLPPVE ELKAETDRPIARHPESTTFVPVRLARVGGRPVLSRAGMGDVTHVVDLSMADAIAVVGAGD EPVPTGMPLTCWRLG >gi|302034490|gb|GL383261.1| GENE 289 261087 - 261737 420 216 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849629|ref|ZP_04469689.1| acetyltransferase, ribosomal protein N-acetylase [Streptosporangium roseum DSM 43021] # 1 197 1 186 206 166 45 1e-39 MTMQAGGVVLRPMRRADEARWTTTRELDCDWLGPWEATKPPGSHERVGGYRMMITRNRRR AKEGTFLPWAIGWDDGWPDRPALNRDTTPLIGQLTVSSISLGSAMSCSMGYWVASAYAGR GVAPTAVALACDYVFQVMGLHRVEICVRPENTKSLRVVEKLGLAEEGMRPAYLHIDGQWR DHRVFRLLTDDYPDGVLRNYLVNHLLPGFALEEDEG >gi|302034490|gb|GL383261.1| GENE 290 261810 - 262613 426 267 aa, chain + ## HITS:1 COG:no KEGG:PPA0496 NR:ns ## KEGG: PPA0496 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 267 1 267 267 486 100.0 1e-136 MSFVQALQAVLIAIVLVGWIAYLVPMVVNRRRSQEVTDDKHEDFPDTMSVVSRGSCTVTP NDTDENPRVELSTPYTRSYARWDLRRSWAVAARRRMTTMLVLLGLTALAMVLAITDVTPW WLVAIFVLLLVGFFALARWSVVAMAKRFDRRYALIDKGWDEDTVELEVGTEPFRAEDEPT SWTIDLDRPVTAPEGSLWDDVVVTAPTYVSTPLGARTVRTIDLSAPGPVPGQVDTPVVAE KPVERSDGEHVAEAHEGPSGIVGVASA >gi|302034490|gb|GL383261.1| GENE 291 262890 - 263093 125 67 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTHILIRLAARCPRLITRTLILRTPRDDHAGKLYPYRPCSGYFYHFRLPRPTVYACQRRF TTEQLAS >gi|302034490|gb|GL383261.1| GENE 292 263352 - 264029 473 225 aa, chain - ## HITS:1 COG:HI1044 KEGG:ns NR:ns ## COG: HI1044 COG3381 # Protein_GI_number: 16272976 # Func_class: R General function prediction only # Function: Uncharacterized component of anaerobic dehydrogenases # Organism: Haemophilus influenzae # 14 217 1 188 203 58 25.0 8e-09 MSPEQVTEPVTGSLDDELDQFAAVFTILGSLHYQVPDADHLHELLQMIDEWPLSRPRSPS RMEEGLQMWRLSREEAESRQVVVADHDRLYGDSAVALVPPYESAHRNREGLVFDEHTLQV RAAYARLGLAAPHLHREPDDHIGLELEFLAQGCLRVLDAREDGHADESHQTLAIVANFLR THVLAWAPSFLSRVSEQAQTSFMKGVALLTIATLDEFDRCLDSVT >gi|302034490|gb|GL383261.1| GENE 293 264026 - 264511 428 161 aa, chain - ## HITS:1 COG:PA3918 KEGG:ns NR:ns ## COG: PA3918 COG0315 # Protein_GI_number: 15599113 # Func_class: H Coenzyme transport and metabolism # Function: Molybdenum cofactor biosynthesis enzyme # Organism: Pseudomonas aeruginosa # 6 160 2 157 160 132 51.0 2e-31 MTSNPFTHLRGNGSAHMVDVTTKTPTVRVATAECCVVCSEPIMTALRDESVPKGDVLAVA RIAGIQATKHTPDLIPLAHRIGVHGAEVDLWLEPDRVRIRATTRTTDLTGVEMEALTAVT VAALTVADMVKGVDRGFAIEHAVITHKAGGRSGEWTRSDDQ >gi|302034490|gb|GL383261.1| GENE 294 264477 - 265619 619 380 aa, chain - ## HITS:1 COG:MT0454 KEGG:ns NR:ns ## COG: MT0454 COG0303 # Protein_GI_number: 15839826 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin biosynthesis enzyme # Organism: Mycobacterium tuberculosis CDC1551 # 1 296 51 352 405 159 43.0 6e-39 MDGFAVRHADVSEATVHTPVTLPVTNDVPAGSPAHRPLDPGTAQRIMTGARMPENADTVI KVEDTDHAPGTVDAPATVTIFRTPSTGANVRRRGEALATGATVLPAGRRLTPEALAAAAA VGHGSLRVHPAPRVGVLATGSELGGAGEPLHRGKIPDSNGIMLGGLVRTHGGVVEQTRVP DDPERLRELVRSWRVDLIVTAGGISMGAYEVVRQGLPELTFHHVAQQPGGPQGAGMVAET PVLALPGNPVGAYVSFHVYVAPLLARLRGLSPDLIDATPAGVTAPIDPLLGRRLVRARAG APWRSPAAKTQFMPVCWNGENVEPVHALGSKSHLVTSLPLVEGLAVAGPGIDHVDSGDEL SILLTGGVTHDLKPIHPPAW >gi|302034490|gb|GL383261.1| GENE 295 265808 - 266230 271 140 aa, chain - ## HITS:1 COG:MT0889 KEGG:ns NR:ns ## COG: MT0889 COG0314 # Protein_GI_number: 15840279 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin converting factor, large subunit # Organism: Mycobacterium tuberculosis CDC1551 # 1 134 5 139 141 106 45.0 1e-23 MHAKISGEPLNVAKVVSLVSDDRSGAVVTFTGVVRNHDGGQSITAIDYSAHPHATQILAD LVEQCATRDGVHGVAAEHRIGHVEVGGTAMVVAVSADHRGQAFEAACEFVDAVKESLPVW KCQWLTDGSHEWAGLPGEEP >gi|302034490|gb|GL383261.1| GENE 296 266231 - 266470 227 79 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3548 NR:ns ## KEGG: HMPREF0675_3548 # Name: not_defined # Def: ThiS family protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 79 1 79 79 145 100.0 4e-34 MQVHYYGGTAEAAGTSEETVETPTGLSVNQLLDHLRNLHPGLGRLLGVCTLFVDGSAVRG EQIVPARAQVEVLPPFAGG >gi|302034490|gb|GL383261.1| GENE 297 266473 - 267513 653 346 aa, chain - ## HITS:1 COG:Cgl1171 KEGG:ns NR:ns ## COG: Cgl1171 COG2896 # Protein_GI_number: 19552421 # Func_class: H Coenzyme transport and metabolism # Function: Molybdenum cofactor biosynthesis enzyme # Organism: Corynebacterium glutamicum # 14 346 2 337 337 340 53.0 3e-93 MSAATGQSAAHHGLPDRFGRLATDLRVSVTDHCNLRCTYCMPAEGMDWLANRDLLTDDEI IRVIGIGIERLGITKVRFTGGEPLLRPSLENLVAATSTLRRTNGTPPITALTTNGIGLDR RVDGLVEAGLDRVNISLDTVDRERFATISRRDRLADVVTGIDAALAARLLVKINAVPQID SYRRDIPELLVFCLDRGLELRFIEFMPIGANGWKREATVSADDILTVVRDAGFSITADQA ARGSSPAQRWSVSSRHTRPGWLGIIASVTRPFCANCSRTRLTADGQIRNCLFADQEADLR SLLRSGASDDEIIAVWQGEMWCKSAHHGVDNGSFANSRRRMSAIGG >gi|302034490|gb|GL383261.1| GENE 298 267418 - 267615 112 65 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3549 NR:ns ## KEGG: HMPREF0675_3549 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 21 65 1 45 45 88 100.0 8e-17 MVGYRDPQVGSQPSETVRQTMVGGTLARRGAHDLTVLPVCLWCGHVIANVAELLSTRGYT SALYR >gi|302034490|gb|GL383261.1| GENE 299 267756 - 268184 317 142 aa, chain + ## HITS:1 COG:no KEGG:PPA0503 NR:ns ## KEGG: PPA0503 # Name: not_defined # Def: putative molybdopterin-binding protein # Organism: P.acnes # Pathway: not_defined # 1 142 1 142 142 229 100.0 4e-59 MSIMSPHPPSHRVSDVAALLGVSDDTVRRWIDQRHVRAAKDTTGRLRVDGASLAAFLVTQ QQERQDLADGAQTQSMRNHIRGIVAKVISDKVMSQVELVTGNLSIVSLVSTEAVRELGLQ VGSIAVAQVKATNVSLQLPVTR >gi|302034490|gb|GL383261.1| GENE 300 268190 - 268960 517 256 aa, chain + ## HITS:1 COG:MT1905 KEGG:ns NR:ns ## COG: MT1905 COG0725 # Protein_GI_number: 15841325 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, periplasmic component # Organism: Mycobacterium tuberculosis CDC1551 # 1 256 1 261 261 167 41.0 2e-41 MSRVSLRTCAIAAVAAVLLAACGSGPSSTQPSAAPTRLTVFAAASLTRSYEQIGEQFERK YPRVDVQFSFEGSQNLVAQMAQGAPADVLATADQRSMNKAVEQNLVNVPRQFASNVLTLV TPAHNPARVTGLNSSLRGAKLVICAPEVPCGNATRKLANKLGVTLKPVSEEQKVTDVRGK VESGEADVGIVYRTDALAAGNKVDVIPIGRANEVVNHYPIATAVGATHQGLAKRFVEYVM SADAQKILSDDGFSGP >gi|302034490|gb|GL383261.1| GENE 301 268840 - 269079 85 79 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVPCTAPLHSFIAPRCLPGNRPCPLRRAIGTGTGLSLHTYHGPENPSSERIFWASADITY STNLLARPWWVAPTAVAIG >gi|302034490|gb|GL383261.1| GENE 302 269126 - 270898 284 590 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 355 564 20 231 245 114 34 6e-24 MWIVILAVVGICVLVLPLVGMGNEVPWARIPAIMASPEAQDALWLSVRTCVIATVIDVFL GVPIALLLARDWNGVAAVRVLVLLPLSLPPVVAGLALLATFGRRGMIGASLHAAGISIAF STAAVVMAQVYVSLPFLVTALESSIRTRSWKLEQTAAALGAGPWRVLRTITMPTVASALG RGTALAAARCLGEFGATITFAGSLQSVTRTMPLQVYLARETDSDTAMALGLVLVVVGAIV AGLTQWQPSQRSWRRNEPPLVEEGLTGQGNYELAGTRGTPYEQHVCEQSDPGKDLPEQSS ITTNLGTSAVTVWSPQAHDDSVSRVRGASAGHEPIGSAAAAIHVDGQVSARSWDVRLDVE PGEVVAVMGPNGAGKSTLASVVTGLLALDRGRVCIGRQLVDAGDGRIVLPGRRGVGLLTQ DALIFEHMSVLDNVAYGPRCHGLSRAQAQKVAYAQLAAVGCAHLAARRGGELSGGQAALV GLARAFAVEPAVLVLDEPTAALDIDAQIRVRDLLKSQLDRTNMTALIITHDVADTMTVAG RLVVLEHGRIIEDGVVSQLLENPKKAFTAQLAALVKFGVRTNSQGAESSS >gi|302034490|gb|GL383261.1| GENE 303 270832 - 271551 211 239 aa, chain - ## HITS:1 COG:no KEGG:PPA0506 NR:ns ## KEGG: PPA0506 # Name: not_defined # Def: putative regulator # Organism: P.acnes # Pathway: not_defined # 34 239 1 206 206 393 98.0 1e-108 MSGQGIGEILTTIASLTPAQQSVLKKVSLHAGPVTITDLARESKLHVNTIREPLNVLVSL GLVEREKLPAAGRGRPYWGYTSRTLSGPNSPADLLRHLSRSTIRWIRDTSDDPVAAARSL GEHLGDDALAMANVPDHTEHSPSDKFSVADHMTKIRVFLTAFGFSAEPHPTNPTALILRA CPFVHPNDTDPVAMAIQQGMLYRVIERTGGNSVHVTLHHEEDSAPCELVLTPNFTNAAS >gi|302034490|gb|GL383261.1| GENE 304 271553 - 272266 245 237 aa, chain - ## HITS:1 COG:Cgl1160 KEGG:ns NR:ns ## COG: Cgl1160 COG2181 # Protein_GI_number: 19552410 # Func_class: C Energy production and conversion # Function: Nitrate reductase gamma subunit # Organism: Corynebacterium glutamicum # 2 237 3 240 259 228 48.0 5e-60 MNTNLLVWLVLPYLSIILLIGGMIWRYRTDQFGWTSRSSQWNEPSILRWSSPLFHFGILF VFLGHVLGLVIPQSWTSTIGITEDTYHVMATVLGSAAGLAALVGLLGLLYRRFMTKSVRL TTTTMDIVTYVLLTLTVTLGCWATVHQQMIVGGYNYRDTIGPWFRSIALFQPRPELMATV PLDYKLHVMAGMVLFSVWPFTRLVHVVSAPVSYPTRPYVIYRSKNGHLGSSSRHYGW >gi|302034490|gb|GL383261.1| GENE 305 272263 - 272934 344 223 aa, chain - ## HITS:1 COG:Cgl1161 KEGG:ns NR:ns ## COG: Cgl1161 COG2180 # Protein_GI_number: 19552411 # Func_class: C Energy production and conversion # Function: Nitrate reductase delta subunit # Organism: Corynebacterium glutamicum # 8 218 14 222 228 172 45.0 3e-43 MGVFLGAPRIPVSTHVDASLAQRRVVHMATSLLLDYPDEQLTQIITAVRHDRDLMPAVVA DEITAFCGVAESWGLRALQEHYVETFDQHRRCALYLSYYSAGDTRERGAAILGFREVMRS AGFELDHANELPDYLPVVLEFSARASEGDTLLRANREALEVIRSALVTASSPYAHLLEGL CLILSPLDKKTLARYQKLISQGPPVEMVGLAATDPVSTLGRQL >gi|302034490|gb|GL383261.1| GENE 306 272936 - 274459 747 507 aa, chain - ## HITS:1 COG:Cgl1162 KEGG:ns NR:ns ## COG: Cgl1162 COG1140 # Protein_GI_number: 19552412 # Func_class: C Energy production and conversion # Function: Nitrate reductase beta subunit # Organism: Corynebacterium glutamicum # 1 474 1 475 531 768 75.0 0 MKVMAQIAMVMNLDKCIGCHTCSVTCKQAWTNREGTEYMWFNNVETRPGVGYPRGWEDQE RWRGGWKRTRSGKLVPYQGGRLATLGKIFANPNLPAKKDYYEPWTYEYDQLLASPSTQHI PTARAKSALTGEHKDTIDWGPNWDDDLGGSMETLDQDPVLHQMNLTVRKSIEDSFMFYLP RICEHCLNPTCVSACPSGAIYKRAEDGIVLVDQDHCRGWRMCVSGCPYKKVFFNHHSGKA EKCTLCYPRLEVGQPTVCSETCVGRLRYLGVLLYDADHVTWAASQPDPRTLYAAQRDILL NPNDPEIITQAKANGVPHSWIKAAQASPVWQLISRYQIALPLHPEYRTLPMVWYVPPLSP VVDAVSASGNDGEDHRVLLAAISQMRIPLEYLAGLFTAGATAPVELSLRRLAAMRSYMRD IFLGNEADETIPEAVDMTGEDIQSMYRLLSIAKYDDRYVIPTTCSGLPDGIADLGRCPVS GSLEAFHSISSPVSAPEGTPTLPLEVI >gi|302034490|gb|GL383261.1| GENE 307 274459 - 278196 2304 1245 aa, chain - ## HITS:1 COG:Cgl1163 KEGG:ns NR:ns ## COG: Cgl1163 COG5013 # Protein_GI_number: 19552413 # Func_class: C Energy production and conversion # Function: Nitrate reductase alpha subunit # Organism: Corynebacterium glutamicum # 18 1245 17 1248 1248 1563 62.0 0 MTEYDETSDAESPSGSALLKMGTWLRRGTTSPDTRQLFLEGGRDADVFYRKCWSHDKVVR STHGVNCTGSCSWKIYVKEGIITWESQQTDYPSTGPDMPDYEPRGCPRGASFSWYEYSPT RIRHPYVRSVLLDAWRDKLAEFGDPVDAWASITNDPELSQAYKCARGHGGMVRVSWEEAT QIIAAAYVHTIKAYGPDRIAGFSVIPAMSMVSYGAGSRFTELLGGTMLSFYDWYADLPPA SPQVFGDQTDVPEAGDWFNSQYLIMWGSNVPVTRTPDAHFMTEARYHGQKVVVVSPDYAD NTKFADEWLRVASGTDGALAMAMGHVILSEFHVTRREPMFLDYMRRYTDSPFLVELDRFD GPQADGAAYVPGKFLTADKVNLQTRPDHPEFRPLVMEADGSLKDPGGTLADRFSESGVGH WNLDLDGVNPVMSMMDVNSWEAVEIALPRFDLPSSPDQTSLGAGIVHRGVPARRIGDRLV TTVYDLLLAQYAVSREGLPGQWPSGYDDPTVPGTPAWQAELTGVPAAAAERIGREFALNS LETGGRSMIVMGAGVNHFYHADEIYRTFLALTNMCATQGVNGGGWAHYVGQEKVRPFTGW ANYSFALDWARPARQMIATAWYYLTTDQWRYDGARAESIASPLGSGSFAGRTTADCMVYS ARRGWTPSYPTFTRNPLDLADEAAAAGMEPAEYIAQKLTDGSLGFACEDPDATQNYPRLL ANWRTNLLGSSAKGTEFFMKHMLGCENDVNATELTEGKRPTDIRWRDDTPPGKLDLMWTA DFRNTSTTLHSDVVLPAATWYEKHDLSSTDMHPYVHSFNPAVDPPWEARTDFEVFRTLAY SVSQMAVKHLGTRTDIVAAPLMHDTPDEMTTPAGSVSREQEAWIPGVTMPKLVTVERDYT QIGAKFDTLGPLTESLGMVTKGVPFHPDPEVADLAQRHGVATSGPGAGRPLLDTAIKACD TILATSGTTNGRLATAGFEQLEARTGTKLTDLSVGSQDRRVTFTDTVIQPQPVITSPEWS GSEHGGRRYSAFVINMERHKPWHTLTGRMHYYLDHDWMRDMGESLPIFRPPLDVAHIYDE PPAGYTGTDADGAAVVSVRYMTPHNKWGIHSQYYDNLHMLTLARGGQTIWMSPADAAKIG VSDNDWVEAYNRNGTVDARAIVSHRIPEGTVFMYHGQERTVNTPLTERSGKRGGTHNSLT RILLKPSHFIGGYAQLSYAFNYYGPTGNQRDEVTLIRRRGQEVTF >gi|302034490|gb|GL383261.1| GENE 308 278254 - 279624 1053 456 aa, chain - ## HITS:1 COG:Cgl1164 KEGG:ns NR:ns ## COG: Cgl1164 COG2223 # Protein_GI_number: 19552414 # Func_class: P Inorganic ion transport and metabolism # Function: Nitrate/nitrite transporter # Organism: Corynebacterium glutamicum # 27 456 10 445 445 509 64.0 1e-144 MIFSDNIRVNCTIPRGDIVSTSPSHHLIENWDPEENWDSGIAWRTLTISTFSMIIAFCVW FLVSAIAPKLNAIGFHLTKSQLYWLTAMPGLSGGFIRLVYMFLPPVIGTRRLVGYSSLLY LIPMLGWFFAVQNTSTGYGTLLLLAFLCGVGGGSFSGYMPSTGYFFPKSKQGTALGVQAG IGNLGMSIVQLLGPWLMGFGLLGLTWIAPQHNAGSPLWVHNIAIVFVPWTILATILAFTM LKDVPVKANFRRQIDIFTNPDTWIMTLMYVMTFGLFSGFSAQFGLLIENTYGNSSNLAHG FSNLPAGASYAFLGPLIGSLVRVVWGPLCDRFGGAIWTLVSGIGMALTFGFCAFFLNPTS PSQFGYFLWGMLTMFFFSGIGNAGTFKQMPMIMPARQAGGAIGFTAAIGCFGPFVVGVAL SSMSAVAWFWICTVFCIVCSIICWIRYARPGAPCPG >gi|302034490|gb|GL383261.1| GENE 309 279547 - 280431 344 294 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3558 NR:ns ## KEGG: HMPREF0675_3558 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 2 294 1 293 293 564 99.0 1e-159 MVGRACAHNVSAWDRAINTDIIRKNHRREGRPALCPNAGVATSRGLLFLAGRIVGTLRRC VGWSYWSETLVKSVAGGLLRIGMRHDHDMTNRRLDAVILAGGCAHRLGGVAKANLRVGTR RLLDVVLDAVDGAREGLEGSNVVVARESVEVPWSVIRTMEDPPGSGPLAGIRAGLQALPP AQPDDLVLVCAVDSPGIGRSIRQLREALEDDPLNHFAGAVTFGGVPKPHRQLLQGLYRRV PLEASIAAADTVVNRSVHSVLGGLCLLDLPVEPEACRDLDTPGDVEWWLRHIGD >gi|302034490|gb|GL383261.1| GENE 310 280728 - 281228 199 166 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|134277849|ref|ZP_01764564.1| ribosomal protein S16 [Burkholderia pseudomallei 305] # 8 147 4 143 194 81 34 4e-14 MDEIRARVITVSDRCAAGAALDRSGPLAASLLAELGCSWLKVDPVTVVPDGIDSVGGALR DALENGCRLVVTTGGTGISPRDLTPEATQPLLVARLDGLAEQVRALGAHGSALAGLSRGL VGVTSRGDQAALIINAPGSTGGVRDTLTVIGPMLEHIFRQLAGGGH >gi|302034490|gb|GL383261.1| GENE 311 281398 - 281673 238 91 aa, chain + ## HITS:1 COG:no KEGG:PPA0514 NR:ns ## KEGG: PPA0514 # Name: not_defined # Def: putative molybdopterin-guanine dinucleotide biosynthesis protein # Organism: P.acnes # Pathway: not_defined # 1 91 1 91 91 164 100.0 7e-40 MSHHDDNPEKMARMRDWLEIAAREVDVDPSVLTDVEQPLLDMVSVISHGPSRPGAPLTAF LVGIATAQGGDTLQLVKKLMQAAEQRGQTRD >gi|302034490|gb|GL383261.1| GENE 312 281737 - 282747 721 336 aa, chain - ## HITS:1 COG:ECs0981 KEGG:ns NR:ns ## COG: ECs0981 COG3302 # Protein_GI_number: 15830235 # Func_class: R General function prediction only # Function: DMSO reductase anchor subunit # Organism: Escherichia coli O157:H7 # 4 163 6 161 287 71 30.0 3e-12 MNTHDVPMILFTVVTQMCVGAFLVLGTAHVGAAIRGRENSVVERTSRPVLYAIGPAMVFG LFVSMFHMGYPAHTLNVLRHPQTSWLSREIMFGSGFALLGFVFAMLSWFKRPAFAIQRVL AVVTAIVGIGLLVCESMIYYSLVTVPAWHSWWVPFSFAATTIILGTLSVACALMITAMVR HRHETAVPSAREKHPKTTGWWSRHVTEEIRAINAPTDDQEWDLSLTVTKWCSIGAAVVSV ALMVGYPLYTSQLASGGPVAHQASNTFSGGIYATRLILLGAIALMLGSFVYRGALHTPRE HPHSLGWLLITTLIITFAGEIVGRALHYWSLVRIGI >gi|302034490|gb|GL383261.1| GENE 313 282747 - 283388 465 213 aa, chain - ## HITS:1 COG:dmsB KEGG:ns NR:ns ## COG: dmsB COG0437 # Protein_GI_number: 16128862 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Escherichia coli K12 # 12 213 4 205 205 227 53.0 1e-59 MGEKNYTAKGAKYGFFFDQTLCTGCKACQIACIDKHDLPTGVRWRRVVEYSGGTWQISGD TFNPSVFTYYTSVSCNHCEDPICMKACPTTAMSRRDDGTVYVDQDKCVGCRYCEWACPYS APQYRKDTGRMSKCDLCYDYRSKGKEPACVAACPSRALDWGPIDELRSTYGNEDAIAPLP DPSVTKPHLVITAHRDAQRWDEGTGEIANTKEI >gi|302034490|gb|GL383261.1| GENE 314 283555 - 284832 930 425 aa, chain - ## HITS:1 COG:STM0964 KEGG:ns NR:ns ## COG: STM0964 COG0243 # Protein_GI_number: 16764325 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Salmonella typhimurium LT2 # 16 425 443 814 814 329 43.0 6e-90 MPFNTEITNTKSNKIIPVFSWLDAIDHGEQMDTFNSGVCEKPAPGVRANKVPIDEHGKPT NVKLSAPIKMVWQYAGNSLVGQTGNNNRSVEILRDDSKCELIVVCDIQYTTSARYADYVL PGTSTAEEEDIHPGENGGPMAYGIVSSQAIKPLYECRNIFDICAGLAKRLGTEKEFTGGL TRSQWLERTIEETRKKDPGLPTYREWKKIGIFRKDMGPYVELDEFRKDPVANPLETPSGK IEIYSERLAAMSEAWTFGTFRKKLAGDKLTALPEYVVTWEGPEEAKASKKYPFQVIGHHF KGRTHSSYGNVDWLLDAHPQTVWINTRDARAKGITNGDQVFVYNDRGTIRLPARVTDRIA PGVLSVPQGAWYRPLSNTKVAPPSKANPKQPVDINGAMNTLTSLHPSPLAKGNAVHTTIA NVEKA >gi|302034490|gb|GL383261.1| GENE 315 284752 - 285105 61 117 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVDGVQPREHWDDLVGFGIGDLSVEGQGELEGLGAFASTGSAAGDANVAGDGCEQEDRPS TIFSVGMTLGPQPWVMAQGLAAAISRAKRRIRSAGTPVMWEAHWAFLMVWSGPFPSR >gi|302034490|gb|GL383261.1| GENE 316 285588 - 286145 283 185 aa, chain - ## HITS:1 COG:HI1047 KEGG:ns NR:ns ## COG: HI1047 COG0243 # Protein_GI_number: 16272979 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Haemophilus influenzae # 26 185 8 168 806 155 50.0 4e-38 MTYRMSGGLNVESYSTNIPGLKTKASRREFMKWSAVVGGTAALAPVLHETKDALANKPTN DASTFVWSACTVNCGSRCPLRLEVKDGTIVRVLPDDTANNKVGSQQVRACVRGRSIRHRI YNPDRLKKPMKRKPGTKRGDEQWVTISWDQALDEIAEKMKKIKARYGNEAFYINYGTGTL GSVMA >gi|302034490|gb|GL383261.1| GENE 317 286569 - 287396 628 275 aa, chain - ## HITS:1 COG:MT3198_1 KEGG:ns NR:ns ## COG: MT3198_1 COG0476 # Protein_GI_number: 15842687 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 # Organism: Mycobacterium tuberculosis CDC1551 # 20 272 10 262 274 249 50.0 3e-66 MDDAVSRATNGHDAVEDMGSTTSLINRDLIRYARHIVLPGFGQEAQRRLRDSRVLVVGAG GLGSPVLLYLSAAGVGYLTILDDDVVDESNLQRQVIHRQADVGRPKALSAKDAVQRLNPH LVAEAVVARLGTDNALDLVKDHDLILDCTDNFTTRYLASDAAEITGTPLVWGTILQYQGQ LSVFWPDRGPMLRDLFPEVPAADSVPSAVVGGTFGPVVGQVGSMMATEAVKVLTGIGTPA VGKLVVVDALGVGARTLSFAADPDRASVTQLPEAE >gi|302034490|gb|GL383261.1| GENE 318 287411 - 288244 485 277 aa, chain - ## HITS:1 COG:Cgl1993 KEGG:ns NR:ns ## COG: Cgl1993 COG2022 # Protein_GI_number: 19553243 # Func_class: H Coenzyme transport and metabolism # Function: Uncharacterized enzyme of thiazole biosynthesis # Organism: Corynebacterium glutamicum # 15 265 2 254 260 297 67.0 2e-80 MSCDEKAATSSDEPLRIGGLRLTSRLIMGTGGSTSMDTLERALVASGTQLTTVAMRRFAA GPRQSVFEILQRHRITALPNTAGCYTARDAILTANLAREALDTNLVKLEVIADEDTLLPD PVELVNAAEQLVANDFVVLAYTNDDPAIAKRLEDLGCAAVMPAGAPIGTGLGILNPHNIE LIVDRANVPVILDAGIGTASEATLAMELGCDAVLLASAVTRAHNPVGMAQAMKMAVVAGR MARTSGRIPRRRLARASSPFDGIITGRVRGPRENDSL >gi|302034490|gb|GL383261.1| GENE 319 288286 - 288555 68 89 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3568 NR:ns ## KEGG: HMPREF0675_3568 # Name: thiS # Def: thiamine biosynthesis protein ThiS # Organism: P.acnes_SK137 # Pathway: Sulfur relay system [PATH:pak04122] # 1 89 1 89 89 146 98.0 3e-34 MMTANNGETTGHYPTTTVNGEPYDPSDNETILDLVSARIGKTLRADGRTVDGSPLGIAVA INGAVIRRAQWAATPVRGVIDVVTAVQGG >gi|302034490|gb|GL383261.1| GENE 320 288562 - 289809 677 415 aa, chain - ## HITS:1 COG:Cgl1991 KEGG:ns NR:ns ## COG: Cgl1991 COG0665 # Protein_GI_number: 19553241 # Func_class: E Amino acid transport and metabolism # Function: Glycine/D-amino acid oxidases (deaminating) # Organism: Corynebacterium glutamicum # 54 411 15 371 374 245 41.0 1e-64 MGTAATRREFAGSTVVGHVDTKSHNHAAETSTIPPSERGRPSSVVIAGAGIIGLTTAWRL RRRGIEVTVLDDAPVSGASFAAAGMLAPVSEVIWDQPTLYPLMVESGRIYRDFAAAIAHD VGHDIGYLESSTFVCAGDSADRQTLNELLELQHRMGMTVNRISVSQARAAEPALGPGCVG VVDIPGDHQVDPRRLCGAILEFLGDRVVPTRASEVLFNEDHRAIGLRGANGKSYRADHVV LAAGVDTGAITGIPQALTDLLRPVRGEVLRLRVPEALRPLVTRTIRGVVQGNAVYIVPRA DGTIVLGATTREDDMVGVRAEGVHQLLRDAHRLVPGILDCEIYEMTAKARPGSPDDVPMV GRVGDGLTVSMGYFRHGILLAAIGSRIGADIVCGTEKDNNPALLAAVNPFRFGNR >gi|302034490|gb|GL383261.1| GENE 321 290191 - 290505 320 104 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3571 NR:ns ## KEGG: HMPREF0675_3571 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 104 1 104 104 199 100.0 3e-50 MDGHPERLGIIVEQSPNRTQIKRLVDPMNLDPLLAEDLAEGHQRPKLERHGEALFLVLHP PFYIDSIEDVAFVEAEVIKQRNCVVPTLIGSIYSMNFDNMPELH >gi|302034490|gb|GL383261.1| GENE 322 290525 - 290758 67 77 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313765362|gb|EFS36726.1| ## NR: gi|313765362|gb|EFS36726.1| conserved domain protein [Propionibacterium acnes HL013PA1] conserved domain protein [Propionibacterium acnes HL110PA2] conserved domain protein [Propionibacterium acnes HL083PA1] conserved domain protein [Propionibacterium acnes HL059PA1] conserved domain protein [Propionibacterium acnes HL036PA1] conserved domain protein [Propionibacterium acnes HL036PA2] conserved domain protein [Propionibacterium acnes HL005PA4] conserved domain protein [Propionibacterium acnes HL050PA1] conserved domain protein [Propionibacterium acnes HL050PA3] conserved domain protein [Propionibacterium acnes HL027PA1] conserved domain protein [Propionibacterium acnes HL002PA1] conserved domain protein [Propionibacterium acnes HL002PA2] conserved domain protein [Propionibacterium acnes HL082PA1] conserved domain protein [Propionibacterium acnes HL037PA1] conserved domain protein [Propionibacterium acnes HL005PA2] conserved domain protein [Propionibacterium acnes HL005PA3] conserved domain protein [Propionibacterium acnes HL078PA1] conserved domain protein [Propionibacterium acnes HL059PA2] conserved domain protein [Propionibacterium acnes HL046PA1] conserved domain protein [Propionibacterium acnes HL030PA1] conserved domain protein [Propionibacterium acnes HL013PA2] conserved domain protein [Propionibacterium acnes HL083PA2] conserved domain protein [Propionibacterium acnes HL025PA2] transcriptional regulator, AraC family [Propionibacterium acnes HL099PA1] # 18 77 1 60 60 111 100.0 2e-23 MSGRCSGLAGTPCSNHLMSIRPGLVSAIGPVATGEVPPWVLALVDAVFLGWNVPDIDRLL RTLARQAYCVWHRSPPS >gi|302034490|gb|GL383261.1| GENE 323 290765 - 292210 542 481 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 20 443 8 412 447 213 29 7e-54 MIWKLHNRGVLEPGEVVAPDERLGWGRTIGLGAQHVVAMFGATFVFPVLMGLNPQLAVMM SGVATLVFIFVTQHEVPSYLGSSAAFPGVATAIYASGGKPNDVSGALLCVGLTLLICGII IQAAGSRVVHKVLPPTVTGAVVMLIGFNLAPVVAKTYWPTDQWTALIVMLLVIALSVGPR GFVSRIAIFLALVIGYLLSWTEDLVFGPLHHSDGSTAPRVDWSAVHNSAWIGLPPATNLN NWQYLPQVHNGSHYASTNVVGFHLPAFHLAFILLALPVVIALIAENTGHVKAVAEMTGKN LDHQVGRAVAADGATSMLATFLGAGPTTTYSENIGVMAATRVYSTAAYVVAAVVAILFGF SPKFGAVISATPGGVLGGITVVLYGMIGLLGAKIWKENEVDFGNPVNLVPVAAGIIIGVG DVSLKFSKSFTLGGIALGTIVTVGVYHLARWLAPHELSDAAGGTNIILDAPGMYVDDDTP Q >gi|302034490|gb|GL383261.1| GENE 324 292293 - 293822 991 509 aa, chain - ## HITS:1 COG:MT1031 KEGG:ns NR:ns ## COG: MT1031 COG1928 # Protein_GI_number: 15840430 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Dolichyl-phosphate-mannose--protein O-mannosyl transferase # Organism: Mycobacterium tuberculosis CDC1551 # 3 508 20 502 503 259 36.0 1e-68 MTDEYTSWIITALITTVAFVLRVWNVGFPNSLVFDETYYPKDAWTMLHQGYEATWPDAAK ANADIVRGITNTWTPDAEFVVHPPVGKWLIATGEQLFGFNSFGWRFSSVVFGSLLVLMTI RLARRLSRSTMVGAIAGILLTLDGLAFVMSRIGLLDIFQAFFLVAGVSAVAADRDWFRHR LADHLRTIGNPHLNGDFGPALGWRPWRLVAGIMFGLACGTKWNSMFVLATMGIVSVIWDW SARRLAGAGTKAWWSFLRDGVPAFVYLVVVALLTYLATWAKWLVTYPHMVFGKSWAGPAP SPGLSKVVGKPLAALWEYHRQIYDFHTGSYMMTQTHVYASNPSGWLVIQRPLGVDAVNGI KPGQQGCKAVGDTCLRVISATGTPVLWWFAAIALVAAVIWWIFARDWRFTLPIVAMMSTW IPWFRYDDRPLFFFYAICIIPFTVTILAIWLGQILGPAKASSRRRIGAIVVGTVMALVAA DFAFIYPILTDGLMTRKAWLARMWFHSWI >gi|302034490|gb|GL383261.1| GENE 325 293679 - 294797 768 372 aa, chain + ## HITS:1 COG:Cgl0866 KEGG:ns NR:ns ## COG: Cgl0866 COG0313 # Protein_GI_number: 19552116 # Func_class: R General function prediction only # Function: Predicted methyltransferases # Organism: Corynebacterium glutamicum # 92 364 9 279 282 229 49.0 7e-60 MEHRPGVLGVVGLIEDETVGESDVPYAQHECHGGDKGRDDPARVLVGHPTVVEAFDGRQG SSRCWHSAIVKGWSDVIVGSAWDDSSVSKTQPGRVILAGTPIGDRRSASPALIETLRDAR VIAAEDTRRLRDLLRRLGVESSARVVSYFEGNESARTPELINCLRDGDDVVVVTDAGMPS VSDPGYRLVTAAIEHGIVVTSVPGPTAVTTALAISGLPTDRFCFEGFLPRKPGERRRRLA ELAQEPRTTVLYEAPHRLADLLDDAADALGTDRRAAVCRELTKTYEEVRRGGLGELAEWA REHARGEITIVIEGAPGTVVGIDEAAEMVAELTADGIKRSKAVAQVARATGVDRHDLYDA AQNALTTDKEES >gi|302034490|gb|GL383261.1| GENE 326 294794 - 295702 565 302 aa, chain + ## HITS:1 COG:Rv1008 KEGG:ns NR:ns ## COG: Rv1008 COG0084 # Protein_GI_number: 15608148 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Mycobacterium tuberculosis H37Rv # 25 302 1 261 264 147 38.0 2e-35 MNEAIREVLGEAGAPPLPEPLAGSIVDSHTHLDTVQDVVGIEPAISLAAAREVGVTRIAQ IGCDVAGSEFAEELARTHKNVIAAVAIHPNDAARLGREKIGDALKRIDELASVGNHVRAI GETGIDHFGTTDADGQALQREVFAAHIAMAHAHDLTLAIHMRDARNGGEGDEPPSGRQAH DDVVDVLNSEGWPDRIIMHCYSGDADLARICLDHGAYLSFSGTITFNSAGPQRDALAIAP DNRILVETDAPFLTPAPRRGKRNGPYLLPHTARFIAKQRGWDELRVCQQLTENAFAAYGG AW >gi|302034490|gb|GL383261.1| GENE 327 295699 - 296595 697 298 aa, chain + ## HITS:1 COG:Cgl0886 KEGG:ns NR:ns ## COG: Cgl0886 COG0030 # Protein_GI_number: 19552136 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Dimethyladenosine transferase (rRNA methylation) # Organism: Corynebacterium glutamicum # 6 288 9 289 293 262 53.0 7e-70 MSETGLLNPASIRRIADQIGLRPTKTRGQNFVHDANTVRRIVSLAQVGAADRVIEVGPGL GSLTLGLLETGAEVVAIEIDEVLANQLPGTVAERMPGAAERLEVVLSDALDVKVIPGAEP TALVANLPYNVAVPVLLHMLAICPQWSTGVVMVQSEVADRLVAAPGSKIYGVPSAKLAWY AEAIRVGNVPPTVFWPVPNVDSGLVRITRRRPPHVDGRDPRVTRSQVFRVVDAAFASRRK MLRSALAGLCGGSMAASELITAAGIDPTARGEALDIGDLARVVEALAQAGALSDSGQV >gi|302034490|gb|GL383261.1| GENE 328 296628 - 297590 491 320 aa, chain + ## HITS:1 COG:MT1040 KEGG:ns NR:ns ## COG: MT1040 COG1947 # Protein_GI_number: 15840439 # Func_class: I Lipid transport and metabolism # Function: 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase # Organism: Mycobacterium tuberculosis CDC1551 # 12 315 5 303 306 226 48.0 4e-59 MDDPFDLLRPMTVTVRVSAKVNLALGVGGLAPDGFHPLATVFEAICIYDEVAVTRRDDSR ITLTVSGEDADQVPTDETNLAWRAVELVREEFASEWGKRGHGADIHIDKSIPVAGGMAGG SADAAGALMAAAALCRLPYSPEELQPLAAQLGSDVPFCLTGGVALGRGRGDRLAPVICRG RHRWVFATSNQGLSTPAVYRRFDELGGTPGGETVPNDLISALTRGDLDAVAASLSNDLQA AAIDLRPELEEVLTVGREVGALTALVSGSGPTCAFLVRDTAGAKKVSAAVSNLPQVHRTR TARGPAAGAQLLPGPVGSFA >gi|302034490|gb|GL383261.1| GENE 329 297587 - 298126 305 179 aa, chain + ## HITS:1 COG:SMc00380 KEGG:ns NR:ns ## COG: SMc00380 COG1846 # Protein_GI_number: 15964053 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Sinorhizobium meliloti # 18 173 6 161 164 115 45.0 4e-26 MTRPLHQNAVHQNSPRKDAVDGIIAAWARERPDLPVEVMEVWSRVTRLARRLDRDRAKAF SQWDLEGWEFDVLAALRRSGEPYQLSPGQLLNELEVASGTMTNRITRLSNRGLVRRLPHP KDGRGVIVELTDEGRDRVDGALAALLESEGRLFDSMDAQVVEQVGQGLRAVLARQEELD >gi|302034490|gb|GL383261.1| GENE 330 298108 - 298791 393 227 aa, chain - ## HITS:1 COG:MT1047 KEGG:ns NR:ns ## COG: MT1047 COG1309 # Protein_GI_number: 15840447 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mycobacterium tuberculosis CDC1551 # 15 213 3 199 202 206 55.0 3e-53 MMSDFSSQPSPPQRRARMTSGQRREQLISVARRLFADNGMAGTSVEEIAATAGVSKPVIY EHFGSKDGLYAVVVDREVRHLQDSLNAAMTRPKQGPKRTLESAVLALLDYIDDRPDGFRI ISRDSSVGSATGSYASILSDVASWAEGILAANFDRHGFDVSYSYLYAQALTGMVGMTGQA WLDTREPAKEVVAAHLVDLTFNGLAHLSGSPHLSRHAERESLQSSSS >gi|302034490|gb|GL383261.1| GENE 331 299041 - 300339 1109 432 aa, chain + ## HITS:1 COG:ML0249 KEGG:ns NR:ns ## COG: ML0249 COG1207 # Protein_GI_number: 15827045 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) # Organism: Mycobacterium leprae # 14 404 5 395 492 318 47.0 2e-86 MTPSPSTDRAEIDGVAAVIVLAAGGGTRMKSTKSKLLHEVAGRPMLSWAIGAARGLNPEH LVVVVGHRREQVEAHLAEDAPDVTTAVQAEQKGTGHAVACGLEGLDELHGEVVVTYGDVP MLTGETLQRMVEVHRERRNLVTVLTAEVEDPTGYGRILRGGEAVVGIVEHKDADEAQRAV REINSGIYVFDAEALREGVSKLSNDNVQGEYYLTDVVTMAADGTVEVPGRGRVGAFRIDD VWQTEGVNDRVQLARMNAEVNRRIVTGWMRAGVTIIDPTSTWIQPDVDLANDVTLYPGVF LNGATTIGAGATVGPDVTVTDSEIREEATVTRSEVTLAVVGEGVRVGPFSNIRPGSVLDR DAKVGAFVETKNTHIGTEAAIPHMAYVGDSEVTAGSSIVAGSVLSRECAAPATVSDITSD SQDDTLNPEADQ >gi|302034490|gb|GL383261.1| GENE 332 300372 - 301304 950 310 aa, chain + ## HITS:1 COG:MT1045 KEGG:ns NR:ns ## COG: MT1045 COG0462 # Protein_GI_number: 15840445 # Func_class: F Nucleotide transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoribosylpyrophosphate synthetase # Organism: Mycobacterium tuberculosis CDC1551 # 1 309 13 322 326 374 60.0 1e-103 MICSGRAYPELAEQIAAELGVELVPSRQVTYANSEIYVQFQESVRGCDAFVIQSHSAPVN EAMMEQLIMIDALKRASAKRITVVSPFYPYARQDKKHLGREPISARLMADLYQAAGADRI MSVDLHAAQIQGFFDGPVDHLWALPVLADYVTSKYDNSDMVVVSPDAGRVRLADMWTDKI GCQLAIIHKRRDPNKANETTTHEVVGEVEGKTCLLVDDMVDTAGTMCQAALALKKHGAKR VIAAATHPILSDPAAERINNSPIEELIVTNTLKIRDDIDIPAMTLLSIAPLIAKAIQEVF EDGSVTSLFR >gi|302034490|gb|GL383261.1| GENE 333 301453 - 302730 791 425 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3583 NR:ns ## KEGG: HMPREF0675_3583 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 425 1 425 425 818 99.0 0 MWPIRTVRAYCAGTVATAVALAAFVTSGAHAAGARETSKPQAYPVPGLFHPCGGSVTPDW HYGETSRHYQSDGTLQFTNQTDHAVDYTASVKTSTNHKIDSNSASKLPPNWNTTLKTELG IVASNGWQDKETFGPVKLGPGESFRVEYGVTVKNFVGMFLGCRDGYLEPSGGANVIQGTA PAERYAYALVIHKDGSISDRALAIPSRGSGKNSRIVDDHDIVMAGPNLEKLADPSKDVPV EPTSPLQRDPSWPKQGERCPARGWYPLDISGIDPLIRQPGYSQDFLNWSKGQYHFTPVTD TVVGAQFAGYVNWNPAADGPPRGWLESVGAIYRAYLPVRTELKGVDLAPGEKVHVEYGTL LRRVNYREVGCKNGVASIVSHYGLASAPAGFWAEATITGTDGTKCTVDVTPDAWKHLPVP TQTTR >gi|302034490|gb|GL383261.1| GENE 334 302766 - 303335 488 189 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3584 NR:ns ## KEGG: HMPREF0675_3584 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 189 1 189 189 336 100.0 3e-91 MIRSLVATLAVGAIVTAGAQMPAQALPVQHQNPANPTTIGAPCSNPGDTGQTVHVVRSYF DGSAGTWTISNYNDTPLPVTRSITETKTKNWSVSAGIDFPLLDVIHISISSSYSTSSTYE VGETVGPYNVAPGKTAVLQAGWIVSDFEGQHTVCGPDKKWQGRGDHFTATLPREHHVRIS TRDNVQYDV >gi|302034490|gb|GL383261.1| GENE 335 303355 - 303951 414 198 aa, chain + ## HITS:1 COG:no KEGG:PPA0534 NR:ns ## KEGG: PPA0534 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 198 1 198 198 361 100.0 8e-99 MLRRAVVGAVTAAVTSTTVLSVVPAGAVQESPNNGINFELPQRWNDNYKPGTRCTPQGTR GVYVTASRRWFKQTDGASVENTTDTAMPVTHTVTVKRSETTEVKGEIKADGTLTTYLNQS YGFDYINTVSWELSQKVGPYDLAPHTQGRLVWGFIMLDVDAQNVSCGADLTWHAVGKPFS GTNPESRYAELRSEGSIG >gi|302034490|gb|GL383261.1| GENE 336 304130 - 304747 1031 205 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|213960306|ref|ZP_03388588.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes SK137] # 1 205 1 205 205 401 100 1e-110 MADIIHLKAEQRTEFGKGAARRIRRDDKVPAVMYGHDHDPIHVTLDGHATLLALRTENPL LSIEIEGQKPMLALPKDVQRDVLKGFVRHVDLLTVRRGEKVDVNVALRITGESAPGTIAM TEFNEIEVQADLLNIPEVIEIDVTGLEAGTTIYLGDLKLPEGTSLLGDAEDVAATVAFPE TEPVEDEESAGEDAQGESEEKAAKE >gi|302034490|gb|GL383261.1| GENE 337 304762 - 305346 305 194 aa, chain + ## HITS:1 COG:Cgl0914 KEGG:ns NR:ns ## COG: Cgl0914 COG0193 # Protein_GI_number: 19552164 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptidyl-tRNA hydrolase # Organism: Corynebacterium glutamicum # 1 184 11 180 180 137 40.0 1e-32 MIGLGNPGPRYDGTRHNVGADVIAELCRRAGEKLSPARGQRAELVRTRLSSAGLGVPAVD AQTVILMRSRTYMNESGIAVSKVASFAGITPDHLIVVHDEIDLDPGRLRLKKGGGDNGHN GLKSIRAHLRTGDFIRVRLGVGRPPGHQDPADWVLARVPARQRAEMGVQVALAADAVESI IIQGLAAAQNRFNS >gi|302034490|gb|GL383261.1| GENE 338 305386 - 305628 229 80 aa, chain - ## HITS:1 COG:CAC2691 KEGG:ns NR:ns ## COG: CAC2691 COG1052 # Protein_GI_number: 15895949 # Func_class: C Energy production and conversion; H Coenzyme transport and metabolism; R General function prediction only # Function: Lactate dehydrogenase and related dehydrogenases # Organism: Clostridium acetobutylicum # 6 71 255 320 326 72 45.0 2e-13 MNPETIDVIENDHRYFHQDHRLDVLNNHDLTLLRSFPNVVVTPHIAFYSDNVTAEMVHCA MEYLRDFSQTGEPLMEVHPD >gi|302034490|gb|GL383261.1| GENE 339 305545 - 305853 105 102 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3589 NR:ns ## KEGG: HMPREF0675_3589 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 102 1 102 102 177 100.0 2e-43 MVIQNVKTVILVKIPVVVLDDVNSFRIHGIYQCSGVYEFTTDAVDEKNALAHHGELLCVD RVVVHRHSGHMQGDGVAVVEQCLQVDELDDVVLLWVRQEVAG >gi|302034490|gb|GL383261.1| GENE 340 306095 - 306283 73 62 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313802681|gb|EFS43903.1| ## NR: gi|313802681|gb|EFS43903.1| hypothetical protein HMPREF9576_01138 [Propionibacterium acnes HL110PA2] hypothetical protein HMPREF9586_01294 [Propionibacterium acnes HL083PA2] # 1 62 1 62 62 123 100.0 5e-27 MLTERSRWKASKMCHFIGSNIECFNPGHEAFLSLKSCEMWSTQSPGNVVACRNTLGLGDM AH >gi|302034490|gb|GL383261.1| GENE 341 306383 - 307438 739 351 aa, chain - ## HITS:1 COG:mlr1136 KEGG:ns NR:ns ## COG: mlr1136 COG1064 # Protein_GI_number: 13471224 # Func_class: R General function prediction only # Function: Zn-dependent alcohol dehydrogenases # Organism: Mesorhizobium loti # 1 349 1 346 346 319 45.0 5e-87 MKAALVEQYHEPLAIRDIPEPAHDSDGVVVEVKACGVCRSDWHGWQGEWPGFTGGSLPHI FGHEFVGLVSDIGNNVSRYRVGDRVIVPFTLGCGHCEYCRSGHSNVCPTVSMPGFSYDGG FAQYVTVPDADANLVKLPDAVDFTDAAGMGCRLMTAYHGIVEVGQIHPGDWLVVYGAGGV GLSATLVATSAGANVIAVDIADDKLALARKVGAIATINSRETDPVEAVRELTDGGADKSV DALGISETLHNAVNSLRSRGTHIQIGMTAEGPVGDVALTINDLIAKEIDFRGSFGMPAVE FRYLLNQVAAGKMKPGQLVTKTIALSEVNDALTAMSTYNTVGTTVITDFTR >gi|302034490|gb|GL383261.1| GENE 342 307813 - 308952 762 379 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3592 NR:ns ## KEGG: HMPREF0675_3592 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 379 1 379 379 706 100.0 0 MQYPLTPKPVRRSGALPIVITVLGAIAILLIVALISAGSPVTFIVGAIPSTAALIVCLLC YRWLDRWEPEPTRLTVMALIWGGSAGVIFSFLVEMAIPASEFVTMAIVAPLAEELAKASV FILVATGARKLELTSLTDHIFYAGICALGFAFVENLGYFALSSSAGEFVVMALVRTGFGV FGHPLYTTATAVGIWAWRTKGGLWKAAVGYIAACLLHGLWNGGPTLLAGSLGLDDTGQLA AMILVYIVLFVPVFIGTIIMTTRNRRNEYEAVRSQLPLMVEAGLVTPAEADMIADPRKRR AILADSGKYGRVAKRNQKRTITAATEAALAQHRIAAGEGGPELIKRRDQLSEWLRSRPDK LGQLPLMPQFPPIQPPATW >gi|302034490|gb|GL383261.1| GENE 343 309016 - 312642 2489 1208 aa, chain + ## HITS:1 COG:MT1048 KEGG:ns NR:ns ## COG: MT1048 COG1197 # Protein_GI_number: 15840448 # Func_class: L Replication, recombination and repair; K Transcription # Function: Transcription-repair coupling factor (superfamily II helicase) # Organism: Mycobacterium tuberculosis CDC1551 # 16 1208 14 1218 1234 1120 53.0 0 MVSVGTTTYPMLVTFGGLTSLLSREPVLSHVVEDALTRRTPTLDLQVAASARPAVAAVLG RSLDGSGRLPVLLVTSTFREAEESVATLKTWLGADAVCYYPSWETLPHERLSPRTDTVGR RMEVLRRLCGTEGEVPQVVVAPVRSLLQPQVAGLGRVAPVRLAVGEEHDLTELATELVNA AYSRVDMVERRGEFAVRGGIVDVFPPVLEHPVRIDFFGDEIEEMTSFAVADQRSTDETHQ ELICAPCRELILTDEVRSRAKALLTDHPELADMLERIGNGQAVEGMEALMPALVDEMELL VDVLPEHAMVVLSDPEMVRSRAADLVRTSEEFLGAGWAAAAGGGQAPIDLAASGYRSLAQ VRSHCLERGMAWWSMSSFSLDSSATDVLVDDDITSAPQTVNPQLVAVEPWHGDVEAAVKD LTARLDDGWTVLLCAEGEGMAKRMSELLGEHNVAARLVDDVDPDATEPCVQVIRLHQRHG FAAESVKLLVASTGDLAESQDPGGTGERRMPRRRRNQIQPLELKPGDLIVHEQHGVGRYV EMVQRTVGGATREYLVIEYAPSKKGQPGDRLFVPVNSLDQVTRYVGGDAPSLDRMGGGDW RKRKARARKAVREIAAELIKLYAARQATKGHAFGPDTAWQRELEGAFAYVETPDQLTTIA DVKRDMEQVVPMDRLVCGDVGYGKTEIAVRAAFKAVQDGKQVAVLVPTTLLVQQHFQTFT ERYAGFPVKVAALSRFQTDTEARETLEGLQRGTVDVVVGTHRLLAKEVEFKDLGLVIVDE EQRFGVEHKEALKRMRVNVDVLAMSATPIPRTLEMAVTGIREMSTIATPPEERHPVLTFA GPYDEGQVVAAIRRELAREGQVFYIHNRVQSIEKTAAKLRELVPEARIVTAHGQMNEKQL EQIMVDFWERRADVLVCTTIVESGIDISTANTLLIDRADLMGLSQLHQLRGRVGRSRERG YAYFLYPADKPLSQTAHDRLATMAAHTDLGSGMAIAMKDLEIRGAGNLLGGEQSGHIADV GFDLYIRLVGDAVAEFRGDSTTADEPEMRIELPVDANLPVEYVETERLRLEMYKRLAEVR SDEEVDAIGAELVDRYGPMPEPVQALLGVARFRLLCRQAGIHEVVPAGRNIRFSPVNLPE SRVMRLKRLYPGSVVKQTAGLVLVPKPMTATIGGQPLGGADLLKWSADLVTNVLAVDTPI GAGRPTEP >gi|302034490|gb|GL383261.1| GENE 344 312710 - 313219 411 169 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3594 NR:ns ## KEGG: HMPREF0675_3594 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 169 3 171 171 276 100.0 3e-73 MRRRLGAAAVAVALVSVASGCASSPSNAATVGNTTVTMKSVDDAVEHCSKFINPSSELTP RQIIASTVIRGAVAQEVLDKRGAKLSDAERDQIVARNGMAALDSDQVCHTMVRSFAGVFH LFDLEGDRKAKADLSAVDVKANPRLGSWDANNLVVQGSSSLSQPFTKTS >gi|302034490|gb|GL383261.1| GENE 345 313228 - 313866 478 212 aa, chain + ## HITS:1 COG:aq_342 KEGG:ns NR:ns ## COG: aq_342 COG1694 # Protein_GI_number: 15605856 # Func_class: R General function prediction only # Function: Predicted pyrophosphatase # Organism: Aquifex aeolicus # 6 195 2 209 257 132 39.0 3e-31 MAAEYARPRAEFSELVEVMARLRDECPWDRSQTHRSLVTYLVEETGEVIDAIEAGTDDDL VEELGDLLLQVVFHSRIGEQGGRFDINEVVGGIVAKLVARHPYVFSDEEVPEDLDAAWEA RKAAAKGRTSSLDGIAYSLSSVARSAKVISRARTRGVGVKLADEPITAAETGDQLVTLIA RAQASGVDADQALRDRLRDLEDEIRKAECRTD >gi|302034490|gb|GL383261.1| GENE 346 313982 - 314512 289 176 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3596 NR:ns ## KEGG: HMPREF0675_3596 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 176 1 176 176 285 100.0 4e-76 MRRALAALFAAVVALGALSGCKGSANDPAGVTEVSDAPTASVPSVSQSSGPKPTPQDVNP NTKLTATPQRGGLKDFLPGVTGIISDRVVTGSTSQTVVVKAGTVTDYYFLCDTTDALMSV TENDESTASTPCHEGFAHLSVGKRAQSGQIELHIDAPENVTYEFVITENPAEDQRQ >gi|302034490|gb|GL383261.1| GENE 347 314600 - 315880 1592 426 aa, chain + ## HITS:1 COG:Cgl0949 KEGG:ns NR:ns ## COG: Cgl0949 COG0148 # Protein_GI_number: 19552199 # Func_class: G Carbohydrate transport and metabolism # Function: Enolase # Organism: Corynebacterium glutamicum # 1 426 1 425 425 553 69.0 1e-157 MATIEFIEAREILDSRGNPTVEVEMILDDGTQARAAVPSGASTGQFEAVELRDGDKKRYS GKGVLKAVENVNEKIAEEVLGCDASEQRIIDQIMIELDGSDNKGKLGANAILGVSLAAAH AAADCAELPLYQYLGGPNSHVLPVPMMNILNGGAHADSDVDIQEFMIAPIGAESFKQAYE WGAAVYHSLKKVLKDKGLATGLGDEGGFAPNLPSNAAALDLILDAIKAAGFEPGKDVALA LDVAASEFFEDGKYTFEGQAKTSAEMIAYYEGLIAKYPLVSIEDPLDEEDWDGWAEFTKK LGEKIQIVGDDLFVTNPKRLAKGIETKAANALLVKVNQIGSLSETIDAVELAHRNGYRCM MSHRSGETEDTTIADLAVALSTGQIKSGAPARGERIAKYNQLLRIEEELGDSAEYAGASA FPRFQA >gi|302034490|gb|GL383261.1| GENE 348 316180 - 316620 260 146 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3598 NR:ns ## KEGG: HMPREF0675_3598 # Name: not_defined # Def: septum formation initiator # Organism: P.acnes_SK137 # Pathway: not_defined # 1 146 72 217 217 249 100.0 2e-65 MGAAVLLVLVMITPSLGIYFSQRSQISRTQDDEARTRASISTLQDEVKRWHDPDYVRAQA RSQLGWVMPGETGYQVIGENGKVIGSTTSLDEKDPANEASADARWWRKAAGSVQDADHPA PPHPSPGAMITPTPSAKLSSPSPSRR >gi|302034490|gb|GL383261.1| GENE 349 316628 - 317170 385 180 aa, chain + ## HITS:1 COG:MT1053 KEGG:ns NR:ns ## COG: MT1053 COG1507 # Protein_GI_number: 15840453 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mycobacterium tuberculosis CDC1551 # 9 159 6 148 163 156 55.0 2e-38 MLEEFTENDRQDVRDQLGREPRGVAGVAWRCGCGKPGVIATEPRLPNGTPFPTTYYLTCP RAASLIGTLESSGLMARMTERLGEDEELADQYRRAHESYIADRVQIGEDAGLDPVPEIDG ISAGGMPTRVKCLHALAGHALAVGPGVNPFGDEVVAELGEFWCDPCAPEHREPESDRRIV >gi|302034490|gb|GL383261.1| GENE 350 317167 - 318099 670 310 aa, chain + ## HITS:1 COG:MT1054 KEGG:ns NR:ns ## COG: MT1054 COG0248 # Protein_GI_number: 15840454 # Func_class: F Nucleotide transport and metabolism; P Inorganic ion transport and metabolism # Function: Exopolyphosphatase # Organism: Mycobacterium tuberculosis CDC1551 # 7 305 6 317 319 227 47.0 3e-59 MSGSHTVAAIDCGTNSIRLLIASADSDGRLVEQARELEMVRLGQGVDATGSFRPDALERT FSACRTFAQAIADHHCDRVGFVATSAARDVSNRDAFFAGVRQALGVDAEVIDGMEEASLS FAGAISGIQVIDEPVLVIDCGGGSTELVLGRGSSIDSRVSLNIGSVRLRERFLHDDPPTV EQIDDARKYVREALDSCPVDVAAARTVIGVAGTVTSLSAIGQNLTDYDRAKVHRSVLTVG QISDLAGKLLSSTVDEVEQMGPLKRRRAEVLCGGAVIIDEVCRRATAGKLVVSETDILDG MALAMLAQGS >gi|302034490|gb|GL383261.1| GENE 351 318331 - 319164 621 277 aa, chain + ## HITS:1 COG:MT1102 KEGG:ns NR:ns ## COG: MT1102 COG4760 # Protein_GI_number: 15840507 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Mycobacterium tuberculosis CDC1551 # 17 275 6 276 278 132 35.0 7e-31 MANPVFSRAEAFQPRGNPYGQPAYAGQGYRAQYGVSGQPGGESGSLLDGPQGQSAERAMT FDDVLGRTGLVLLIIAAIGAVSFALIGPNVVASGPALVVGSIAAFITAMVVSTRRTVPVG GVIFYCICEGLVLGSMSAMFETAYPGIVVQAVLGTFAAAGVTLAAYKFFNIRVTPRFRQI VIISTFGFALAMLVNLVLMLFRINIGVASFGPIGILCSALGVVLAAMNLVVDFDYAEQGV RNQAPASESWRAAFGIAVTMVWLYTEILRILSYFRAD >gi|302034490|gb|GL383261.1| GENE 352 319236 - 319931 373 231 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3603 NR:ns ## KEGG: HMPREF0675_3603 # Name: not_defined # Def: hydrolase, NUDIX family # Organism: P.acnes_SK137 # Pathway: not_defined # 1 231 1 231 231 435 100.0 1e-121 MLITAVGTPGSGQTHAFRVRHGMNPHVELWRHGLVVREYLSADRVDDEIVVTAHVAPRTS SSQPPRTRKSVPDLSEDRQADEPVRPYQRIAAYAVVRSRRGLLGTECSPRTAVPGLWALP GGGLEPGESPAQAVTREVMEESGQRVRLNRIIDLQSDHWIGRSPTGVLEDFHALRIIYSA TSENPTDPYVIDVGGTTQSAQWIPLWRWRRLSWGAATRMCLETHLRDVPST >gi|302034490|gb|GL383261.1| GENE 353 320008 - 320973 545 321 aa, chain - ## HITS:1 COG:no KEGG:PPA0551 NR:ns ## KEGG: PPA0551 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 321 1 321 321 546 99.0 1e-154 MTYRIRFRQTASVILSAAALCVCASCTSTTPTTPSDEPSRTALVPSSKVTASVSPLDGIH TRAIINELVAASGNGPITKVDITKGALSITVQIGNSPTIWTWQNGKIDSSATQSTQTASR PFNPGDFAVEKLPVILSRAADISGSHMNQNLQIVEYNQGTVLMTVSTKPETQTVFFRPNG SAINHIDFASTSGMTEALSDAVASAKQVDQISYQPGKAIIVDTPTTTPGIVMRRTRSADM PAWAVQRRSDASATFSPGLLNPHVIVRIMNLAAAQAHQKPSDMEWTISQDTKLDTPVLRV DINGLTRAFNTDGTDVTDKIK Prediction of potential genes in microbial genomes Time: Thu Jul 21 06:07:21 2011 Seq name: gi|302034489|gb|GL383262.1| Propionibacterium acnes HL025PA2 genomic scaffold Scfld16, whole genome shotgun sequence Length of sequence - 513 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 31 - 444 323 ## PPA1715 hypothetical protein Predicted protein(s) >gi|302034489|gb|GL383262.1| GENE 1 31 - 444 323 137 aa, chain + ## HITS:1 COG:no KEGG:PPA1715 NR:ns ## KEGG: PPA1715 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 137 330 466 466 253 99.0 2e-66 MTTTADQTAEVGKPFGDTAHITGTVPEGAHITFKLSHKGLLPNMCGDSVITTKPVAVPAG NHIQPIDIASPKVTVGQAGTYYWVETLTDSNGKVLAQGKCGEHAETTTVTAPVVPTPTPT MIPVGPSHPGLMPHTGV Prediction of potential genes in microbial genomes Time: Thu Jul 21 06:10:20 2011 Seq name: gi|302034488|gb|GL383263.1| Propionibacterium acnes HL025PA2 genomic scaffold Scfld18, whole genome shotgun sequence Length of sequence - 161561 bp Number of predicted genes - 166, with homology - 157 Number of transcription units - 88, operones - 35 average op.length - 3.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 37 - 96 5.0 1 1 Op 1 . + CDS 163 - 1566 587 ## PPA1874 hypothetical protein 2 1 Op 2 . + CDS 1602 - 3422 1082 ## PPA1874 hypothetical protein - Term 3269 - 3307 0.8 3 2 Tu 1 . - CDS 3359 - 3688 94 ## HMPREF0675_4926 hypothetical protein + Prom 3559 - 3618 2.4 4 3 Tu 1 . + CDS 3734 - 4927 1411 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 5 4 Tu 1 . - CDS 5091 - 6659 790 ## COG4425 Predicted membrane protein 6 5 Tu 1 . + CDS 6733 - 6945 111 ## - Term 6899 - 6941 10.2 7 6 Op 1 . - CDS 6962 - 8641 1487 ## COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases 8 6 Op 2 . - CDS 8647 - 8904 221 ## PPA1871 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor (EC:3.1.4.16) 9 7 Tu 1 . - CDS 9007 - 10704 1556 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases 10 8 Op 1 . + CDS 10758 - 12251 1547 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases 11 8 Op 2 . + CDS 12326 - 13930 613 ## HMPREF0675_4920 hypothetical protein 12 9 Tu 1 . - CDS 13911 - 15827 895 ## COG0156 7-keto-8-aminopelargonate synthetase and related enzymes 13 10 Tu 1 . - CDS 16171 - 16407 130 ## 14 11 Op 1 40/0.000 + CDS 16385 - 16696 525 ## PROTEIN SUPPORTED gi|50843319|ref|YP_056546.1| 30S ribosomal protein S10 15 11 Op 2 58/0.000 + CDS 16708 - 17379 1139 ## PROTEIN SUPPORTED gi|50843318|ref|YP_056545.1| 50S ribosomal protein L3 16 11 Op 3 61/0.000 + CDS 17376 - 18281 1546 ## PROTEIN SUPPORTED gi|213961379|ref|ZP_03389657.1| 50S ribosomal protein L4 17 11 Op 4 61/0.000 + CDS 18278 - 18586 504 ## PROTEIN SUPPORTED gi|50843316|ref|YP_056543.1| 50S ribosomal protein L23 18 11 Op 5 60/0.000 + CDS 18613 - 19449 1467 ## PROTEIN SUPPORTED gi|50843315|ref|YP_056542.1| 50S ribosomal protein L2 19 11 Op 6 59/0.000 + CDS 19465 - 19746 496 ## PROTEIN SUPPORTED gi|50843314|ref|YP_056541.1| 30S ribosomal protein S19 20 11 Op 7 61/0.000 + CDS 19764 - 20225 746 ## PROTEIN SUPPORTED gi|50843313|ref|YP_056540.1| 50S ribosomal protein L22 21 11 Op 8 50/0.000 + CDS 20227 - 21036 1372 ## PROTEIN SUPPORTED gi|50843312|ref|YP_056539.1| 30S ribosomal protein S3 22 11 Op 9 50/0.000 + CDS 21038 - 21457 740 ## PROTEIN SUPPORTED gi|50843311|ref|YP_056538.1| 50S ribosomal protein L16 23 11 Op 10 50/0.000 + CDS 21457 - 21690 376 ## PROTEIN SUPPORTED gi|50843310|ref|YP_056537.1| 50S ribosomal protein L29 24 11 Op 11 50/0.000 + CDS 21693 - 21965 452 ## PROTEIN SUPPORTED gi|50843309|ref|YP_056536.1| 30S ribosomal protein S17 + Term 22000 - 22039 10.5 + Prom 22443 - 22502 1.6 25 12 Op 1 57/0.000 + CDS 22562 - 22930 616 ## PROTEIN SUPPORTED gi|50843308|ref|YP_056535.1| 50S ribosomal protein L14 26 12 Op 2 48/0.000 + CDS 22931 - 23299 615 ## PROTEIN SUPPORTED gi|50843307|ref|YP_056534.1| 50S ribosomal protein L24 27 12 Op 3 50/0.000 + CDS 23296 - 23928 1084 ## PROTEIN SUPPORTED gi|213961424|ref|ZP_03389702.1| 50S ribosomal protein L5 28 12 Op 4 50/0.000 + CDS 23936 - 24121 331 ## PROTEIN SUPPORTED gi|50843305|ref|YP_056532.1| 30S ribosomal protein S14 29 12 Op 5 55/0.000 + CDS 24281 - 24688 683 ## PROTEIN SUPPORTED gi|50843304|ref|YP_056531.1| 30S ribosomal protein S8 30 12 Op 6 46/0.000 + CDS 24717 - 25259 921 ## PROTEIN SUPPORTED gi|50843303|ref|YP_056530.1| 50S ribosomal protein L6 31 12 Op 7 56/0.000 + CDS 25261 - 25644 615 ## PROTEIN SUPPORTED gi|50843302|ref|YP_056529.1| 50S ribosomal protein L18 32 12 Op 8 50/0.000 + CDS 25669 - 26316 1070 ## PROTEIN SUPPORTED gi|50843301|ref|YP_056528.1| 30S ribosomal protein S5 33 12 Op 9 48/0.000 + CDS 26316 - 26498 300 ## PROTEIN SUPPORTED gi|50843300|ref|YP_056527.1| 50S ribosomal protein L30 34 12 Op 10 . + CDS 26500 - 26940 752 ## PROTEIN SUPPORTED gi|50843299|ref|YP_056526.1| 50S ribosomal protein L15 - Term 26904 - 26942 1.3 35 13 Tu 1 . - CDS 27054 - 27287 137 ## + Prom 27016 - 27075 1.8 36 14 Op 1 . + CDS 27290 - 27460 65 ## HMPREF0675_4896 hypothetical protein 37 14 Op 2 . + CDS 27454 - 27702 268 ## HMPREF0675_4895 hypothetical protein + Term 27710 - 27757 11.2 38 15 Tu 1 . + CDS 27896 - 29599 1756 ## COG0747 ABC-type dipeptide transport system, periplasmic component + Term 29616 - 29673 11.0 39 16 Op 1 4/0.000 + CDS 29781 - 30467 445 ## COG0584 Glycerophosphoryl diester phosphodiesterase 40 16 Op 2 . + CDS 30587 - 31906 988 ## COG0477 Permeases of the major facilitator superfamily 41 17 Tu 1 . - CDS 31896 - 32534 473 ## PPA1836 hypothetical protein + Prom 32574 - 32633 1.7 42 18 Op 1 28/0.000 + CDS 32704 - 34023 883 ## PROTEIN SUPPORTED gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 43 18 Op 2 12/0.000 + CDS 34020 - 34589 738 ## COG0563 Adenylate kinase and related kinases 44 18 Op 3 9/0.000 + CDS 34594 - 35430 569 ## COG0024 Methionine aminopeptidase 45 18 Op 4 2/0.000 + CDS 35645 - 35866 320 ## PROTEIN SUPPORTED gi|15610598|ref|NP_217979.1| translation initiation factor IF-1 46 18 Op 5 . + CDS 35945 - 36058 203 ## PROTEIN SUPPORTED gi|50843287|ref|YP_056514.1| 50S ribosomal protein L36 47 19 Op 1 48/0.000 + CDS 36437 - 36808 619 ## PROTEIN SUPPORTED gi|50843286|ref|YP_056513.1| 30S ribosomal protein S13 48 19 Op 2 36/0.000 + CDS 36880 - 37287 693 ## PROTEIN SUPPORTED gi|50843285|ref|YP_056512.1| 30S ribosomal protein S11 49 19 Op 3 26/0.000 + CDS 37318 - 37923 1034 ## PROTEIN SUPPORTED gi|50843284|ref|YP_056511.1| 30S ribosomal protein S4 + Term 37976 - 38015 -0.6 + Prom 37941 - 38000 2.0 50 19 Op 4 . + CDS 38169 - 39185 1067 ## COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit + Term 39290 - 39341 1.3 51 20 Tu 1 . - CDS 39084 - 39329 87 ## 52 21 Tu 1 . + CDS 39487 - 40023 893 ## PROTEIN SUPPORTED gi|50843282|ref|YP_056509.1| 50S ribosomal protein L17 + Term 40031 - 40080 14.5 53 22 Op 1 . + CDS 40133 - 41350 854 ## COG0438 Glycosyltransferase 54 22 Op 2 . + CDS 41350 - 41982 416 ## PPA1823 hypothetical protein 55 23 Tu 1 . - CDS 41998 - 43371 1092 ## COG0477 Permeases of the major facilitator superfamily 56 24 Tu 1 . + CDS 43265 - 43462 58 ## gi|314924144|gb|EFS87975.1| conserved domain protein 57 25 Tu 1 . - CDS 43707 - 45116 524 ## PPA1821 putative sialidase 58 26 Op 1 . - CDS 45345 - 49601 2713 ## COG1874 Beta-galactosidase 59 26 Op 2 . - CDS 49598 - 50107 313 ## COG1874 Beta-galactosidase 60 27 Tu 1 . - CDS 50354 - 50971 384 ## PROTEIN SUPPORTED gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent - Term 50983 - 51016 3.8 61 28 Tu 1 . - CDS 51170 - 51622 -42 ## PPA2364 hypothetical protein - Prom 51792 - 51851 2.5 + Prom 51649 - 51708 4.2 62 29 Op 1 . + CDS 51852 - 52694 684 ## COG1131 ABC-type multidrug transport system, ATPase component 63 29 Op 2 . + CDS 52676 - 54289 991 ## PPA1816 ABC transporter associated permease + Term 54294 - 54339 8.3 64 30 Tu 1 . + CDS 54382 - 55143 192 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 65 31 Op 1 . - CDS 55196 - 55957 469 ## HMPREF0675_4871 hypothetical protein 66 31 Op 2 34/0.000 - CDS 55954 - 57609 998 ## COG1122 ABC-type cobalt transport system, ATPase component 67 31 Op 3 . - CDS 57606 - 58625 568 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters + Prom 58534 - 58593 2.4 68 32 Tu 1 . + CDS 58741 - 58956 102 ## gi|313793307|gb|EFS41365.1| hypothetical protein HMPREF9575_00836 69 33 Op 1 . - CDS 58937 - 59557 299 ## COG2813 16S RNA G1207 methylase RsmC 70 33 Op 2 . - CDS 59554 - 60393 427 ## COG0101 Pseudouridylate synthase 71 33 Op 3 . - CDS 60390 - 61061 596 ## COG0220 Predicted S-adenosylmethionine-dependent methyltransferase - Prom 61154 - 61213 49.9 72 34 Tu 1 . - CDS 61215 - 61418 146 ## PPA1808 methyltransferase - Prom 61513 - 61572 1.7 73 35 Tu 1 . + CDS 61606 - 61884 158 ## PPA1807 hypothetical protein 74 36 Tu 1 . - CDS 62004 - 62909 658 ## PPA1806 hypothetical protein - Prom 62932 - 62991 2.1 + Prom 62896 - 62955 2.7 75 37 Op 1 . + CDS 63060 - 65216 1164 ## COG4724 Endo-beta-N-acetylglucosaminidase D 76 37 Op 2 . + CDS 65213 - 65785 160 ## PPA1805 endo-beta-N-acetylglucosaminidase family protein 77 37 Op 3 . + CDS 65716 - 66300 125 ## HMPREF0675_4862 hypothetical protein + Prom 66302 - 66361 40.9 78 38 Op 1 59/0.000 + CDS 66574 - 67059 764 ## PROTEIN SUPPORTED gi|213961349|ref|ZP_03389627.1| ribosomal protein L13 79 38 Op 2 4/0.000 + CDS 67082 - 67603 880 ## PROTEIN SUPPORTED gi|213961461|ref|ZP_03389739.1| ribosomal protein S9 + Term 67622 - 67672 20.2 80 39 Tu 1 . + CDS 67830 - 69182 1199 ## COG1109 Phosphomannomutase 81 40 Tu 1 . + CDS 69294 - 69941 378 ## HMPREF0675_4858 hypothetical protein 82 41 Tu 1 . - CDS 69986 - 70969 879 ## COG1072 Panthothenate kinase 83 42 Tu 1 . - CDS 71100 - 72113 826 ## COG1075 Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold 84 43 Tu 1 . + CDS 72019 - 72258 98 ## gi|282855140|ref|ZP_06264472.1| hypothetical protein HMPREF9206_0375 - Term 72180 - 72222 11.1 85 44 Tu 1 . - CDS 72248 - 73267 891 ## COG1075 Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold 86 45 Tu 1 . + CDS 73443 - 75290 1434 ## COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains 87 46 Tu 1 . - CDS 75277 - 75495 82 ## 88 47 Op 1 1/0.000 + CDS 75400 - 75747 284 ## COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) 89 47 Op 2 . + CDS 75838 - 77283 415 ## PROTEIN SUPPORTED gi|225086616|ref|YP_002657886.1| ribosomal protein S15 + Term 77432 - 77476 1.3 90 48 Tu 1 . - CDS 77327 - 78466 659 ## COG0438 Glycosyltransferase - Prom 78603 - 78662 3.6 + Prom 78562 - 78621 2.7 91 49 Tu 1 . + CDS 78672 - 78863 101 ## + Term 78923 - 78973 -0.9 92 50 Tu 1 . - CDS 78837 - 79061 89 ## + Prom 78927 - 78986 1.6 93 51 Op 1 . + CDS 79060 - 79755 302 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 94 51 Op 2 . + CDS 79755 - 82094 1084 ## PPA1789 putative ABC transporter-associated permease + Term 82112 - 82146 -1.0 95 52 Tu 1 . + CDS 82446 - 84548 1569 ## COG0513 Superfamily II DNA and RNA helicases - Term 84510 - 84539 -0.7 96 53 Tu 1 . - CDS 84558 - 85271 300 ## HMPREF0675_4843 hypothetical protein + Prom 85273 - 85332 1.8 97 54 Op 1 12/0.000 + CDS 85450 - 86343 761 ## COG0802 Predicted ATPase or kinase 98 54 Op 2 20/0.000 + CDS 86343 - 87002 296 ## PROTEIN SUPPORTED gi|15827107|ref|NP_301370.1| putative acetyltransferase 99 54 Op 3 9/0.000 + CDS 86999 - 87469 213 ## PROTEIN SUPPORTED gi|227881166|ref|ZP_03999028.1| (SSU ribosomal protein S18P)-alanine acetyltransferase 100 54 Op 4 . + CDS 87462 - 88505 717 ## PROTEIN SUPPORTED gi|229232313|ref|ZP_04356740.1| (SSU ribosomal protein S18P)-alanine acetyltransferase 101 55 Tu 1 . + CDS 88619 - 89110 507 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes + Term 89161 - 89200 1.0 + Prom 89128 - 89187 1.7 102 56 Op 1 33/0.000 + CDS 89236 - 90405 988 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 103 56 Op 2 35/0.000 + CDS 90428 - 91507 907 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 104 56 Op 3 . + CDS 91504 - 92256 185 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 + Term 92477 - 92518 0.8 105 57 Tu 1 . - CDS 92283 - 92936 24 ## PPA1777 hypothetical protein 106 58 Op 1 . + CDS 92965 - 94164 599 ## COG0500 SAM-dependent methyltransferases 107 58 Op 2 . + CDS 94169 - 94963 336 ## HMPREF0675_4832 hypothetical protein 108 58 Op 3 . + CDS 95013 - 96086 445 ## PPA1774 hypothetical protein + Term 96124 - 96164 -0.8 + Prom 96100 - 96159 1.5 109 59 Op 1 41/0.000 + CDS 96292 - 96588 381 ## COG0234 Co-chaperonin GroES (HSP10) 110 59 Op 2 . + CDS 96600 - 98195 1499 ## PROTEIN SUPPORTED gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 + Term 98320 - 98349 -0.9 111 60 Tu 1 . + CDS 98626 - 99195 343 ## PPA1771 hypothetical protein + Term 99225 - 99270 14.0 112 61 Op 1 . - CDS 99150 - 99362 104 ## 113 61 Op 2 . - CDS 99445 - 101184 699 ## PROTEIN SUPPORTED gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 114 62 Op 1 . + CDS 101566 - 103008 616 ## HMPREF0675_4826 hypothetical protein 115 62 Op 2 6/0.000 + CDS 103106 - 104620 1220 ## COG0516 IMP dehydrogenase/GMP reductase 116 62 Op 3 . + CDS 104654 - 105757 1079 ## COG0516 IMP dehydrogenase/GMP reductase 117 62 Op 4 . + CDS 105815 - 106162 363 ## COG1605 Chorismate mutase 118 63 Op 1 . - CDS 106171 - 106743 528 ## COG1045 Serine acetyltransferase 119 63 Op 2 . - CDS 106733 - 107050 63 ## HMPREF0675_4820 hypothetical protein 120 64 Tu 1 . + CDS 106940 - 108493 1259 ## COG0519 GMP synthase, PP-ATPase domain/subunit + Term 108512 - 108563 11.1 121 65 Tu 1 . - CDS 108759 - 109043 360 ## COG1983 Putative stress-responsive transcriptional regulator - Prom 109093 - 109152 1.7 - Term 109115 - 109152 3.3 122 66 Tu 1 . - CDS 109276 - 109539 411 ## HMPREF0675_4818 hypothetical protein - Prom 109602 - 109661 4.5 123 67 Op 1 . - CDS 109686 - 110948 914 ## COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes 124 67 Op 2 32/0.000 - CDS 111045 - 111698 795 ## COG2011 ABC-type metal ion transport system, permease component 125 67 Op 3 10/0.000 - CDS 111698 - 112795 828 ## COG1135 ABC-type metal ion transport system, ATPase component 126 67 Op 4 . - CDS 112827 - 113789 1140 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen 127 68 Tu 1 . + CDS 114236 - 116668 1360 ## COG0210 Superfamily I DNA and RNA helicases 128 69 Op 1 39/0.000 + CDS 116895 - 118070 1214 ## COG0045 Succinyl-CoA synthetase, beta subunit 129 69 Op 2 . + CDS 118074 - 118967 1037 ## COG0074 Succinyl-CoA synthetase, alpha subunit + Prom 119006 - 119065 74.4 130 70 Op 1 . + CDS 119195 - 120688 703 ## HMPREF0675_4808 hypothetical protein 131 70 Op 2 16/0.000 + CDS 120974 - 121969 460 ## COG1985 Pyrimidine reductase, riboflavin biosynthesis 132 70 Op 3 15/0.000 + CDS 121962 - 122576 458 ## COG0307 Riboflavin synthase alpha chain 133 70 Op 4 18/0.000 + CDS 122570 - 123886 923 ## COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase 134 70 Op 5 . + CDS 123883 - 124383 417 ## COG0054 Riboflavin synthase beta-chain 135 70 Op 6 10/0.000 + CDS 124408 - 125031 526 ## COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN 136 70 Op 7 . + CDS 125028 - 126578 1295 ## COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) + Term 126751 - 126787 1.7 137 71 Op 1 . - CDS 126656 - 127282 345 ## PPA1746 hypothetical protein 138 71 Op 2 . - CDS 127294 - 129720 1868 ## PPA1745 hypothetical protein 139 72 Op 1 . + CDS 129920 - 130915 360 ## PPA1744 hypothetical protein 140 72 Op 2 . + CDS 130930 - 131793 711 ## COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 141 72 Op 3 . + CDS 131790 - 132128 162 ## PPA1742 hypothetical protein 142 73 Tu 1 . - CDS 132203 - 133546 838 ## PROTEIN SUPPORTED gi|148544941|ref|YP_001272311.1| 50S ribosomal protein L29P - Prom 133789 - 133848 3.2 143 74 Tu 1 . + CDS 133521 - 133712 61 ## gi|328752408|gb|EGF66024.1| hypothetical protein HMPREF9579_02409 + Term 133836 - 133879 5.1 - Term 133818 - 133852 2.7 144 75 Tu 1 . - CDS 133974 - 134957 1074 ## COG0039 Malate/lactate dehydrogenases 145 76 Tu 1 . - CDS 135136 - 135987 530 ## COG0788 Formyltetrahydrofolate hydrolase 146 77 Tu 1 . + CDS 136183 - 138387 1981 ## COG2838 Monomeric isocitrate dehydrogenase + Term 138425 - 138469 6.6 147 78 Tu 1 . + CDS 138597 - 139532 633 ## PPA1737 hypothetical protein + Term 139546 - 139580 1.3 148 79 Op 1 . + CDS 139660 - 141066 1001 ## COG1253 Hemolysins and related proteins containing CBS domains 149 79 Op 2 . + CDS 141063 - 142304 694 ## HMPREF0675_4789 hypothetical protein + Prom 142384 - 142443 1.6 150 80 Tu 1 15/0.000 + CDS 142512 - 143630 1141 ## COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein + Prom 143675 - 143734 32.4 151 81 Op 1 24/0.000 + CDS 143828 - 145417 1382 ## COG3845 ABC-type uncharacterized transport systems, ATPase components 152 81 Op 2 26/0.000 + CDS 145414 - 146685 1368 ## COG4603 ABC-type uncharacterized transport system, permease component 153 81 Op 3 3/0.000 + CDS 146682 - 148040 1139 ## COG1079 Uncharacterized ABC-type transport system, permease component 154 81 Op 4 . + CDS 148015 - 148455 192 ## COG0295 Cytidine deaminase 155 81 Op 5 . + CDS 148452 - 149354 549 ## COG0328 Ribonuclease HI 156 82 Tu 1 . + CDS 149464 - 151242 1462 ## COG0143 Methionyl-tRNA synthetase 157 83 Op 1 4/0.000 - CDS 151244 - 151876 426 ## COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases - Prom 152091 - 152150 1.8 158 83 Op 2 . - CDS 152166 - 153818 1157 ## COG0477 Permeases of the major facilitator superfamily 159 83 Op 3 . - CDS 153899 - 154549 336 ## PPA1725 putative uridine kinase (EC:2.7.1.48) 160 84 Tu 1 . + CDS 154735 - 156408 1338 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 161 85 Op 1 3/0.000 - CDS 156440 - 158116 1338 ## COG1109 Phosphomannomutase 162 85 Op 2 . - CDS 158143 - 158955 739 ## COG0005 Purine nucleoside phosphorylase 163 86 Tu 1 . + CDS 158864 - 159034 81 ## 164 87 Tu 1 . + CDS 159144 - 160523 567 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 165 88 Op 1 . - CDS 160562 - 161284 559 ## HMPREF0675_4773 hypothetical protein 166 88 Op 2 . - CDS 161341 - 161538 186 ## COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit Predicted protein(s) >gi|302034488|gb|GL383263.1| GENE 1 163 - 1566 587 467 aa, chain + ## HITS:1 COG:no KEGG:PPA1874 NR:ns ## KEGG: PPA1874 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 439 1 439 1100 784 98.0 0 MTDESGHDKEQHDQLSTSNQSNNAYDSIDPSQTVIRPAPTPTPQPSSGPEILADGRGTGP ADQPGRPDGGFGQPAAGPASVGGEPQRQPQTMPPNPPLPNQPHQSGGFTGPQGSPRPDQL NGPRPGWQSGWQPQGHSGPYGPGPQPGQQMGHPGVQPGQQSVPQPGTAPAYPAQAPGQRS GVQPGMAPNPGHPGPYQTSPQQGGYTITQPLPTMPAAGQAPMMQQPYQGALAVQPSSNWF ADAWGVFRRIWRGDVLEAFDLSMASRKFWLWTGLAQAGFAGLAYANLLWRVMSSIDNGAN HVTHSFLGWFGMDDPNQSYEITGFDFSAWLKAFITMFLAVAVVFAVRPLFIKMVYAWRQS RQTWEVAYTVNSVATLSSTFVVAVVSVLWFVPSGALVLVGLVMLGALGAMCQFLGELLLY TGVNKTGGFPPYSRFPLVPHVIGTGFYAVVVAVLWLLCGTVGRGIMS >gi|302034488|gb|GL383263.1| GENE 2 1602 - 3422 1082 606 aa, chain + ## HITS:1 COG:no KEGG:PPA1874 NR:ns ## KEGG: PPA1874 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 606 481 1086 1100 1143 99.0 0 MRRGIVALCVAMAFVLSGCGAVIGTTLKVNDDGSGSRSLTVTFTNDDSDEAKQMFAKPLS VYDASIKKHVPSQLTYNGLHMQGKSMVASFQLDFSSPQDYLTKVRAIIGGSKDPTSDIQN INTPLVNGVVGKENFTSHDLLEWLPDGLEQDGIVDSGNVGNVLDSENNMTLTIGGKNFTS QTPLDIEHVADNGFDQVVVQLNFKSMKDVGAVVWYFSEQAWGADKENKVKAFLDQVTKDG NGEAADAKSDDLPENVRQRLSSTYPVGKKVTIKAGSLDEVDKRVAQALGNKSGSLKISPG QAKQSDPSSGATAAFVIPLSLTSQVSCSAICSRDAGDPVMVVTHPSQWVDEDSSAPSDEG QTSTQIIRGDAPLTLDVPLETKKTSTAIHLNPGKEVSYEANLTFDNAVLGDNKEEVKKLL RGVRNWSVEQKSDKSTTQYTVRGSADDALTFSKKYSGSDSPLVVENELKPTTFKNHWMIV ITPLDWMPRGEIKIITDHGKFDDGSSEKTWTPGESTVFRTRASTLRTGPVVAAVVIGVLI VAAAVLAYFKLDAIRAWRKKRAEAARQQAAQNGQYRIPAQSQTPQNQQWPSQPGAPVPPS PGGYPP >gi|302034488|gb|GL383263.1| GENE 3 3359 - 3688 94 109 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4926 NR:ns ## KEGG: HMPREF0675_4926 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 109 28 136 136 204 100.0 6e-52 MWIFLGGSQERFWTGPRPEVRELVLLFCTRPGIVKPGFPLLLAATRQPLPRLHAGSMTRR ATWQRAPPSLEERALTADRFLSTGHRHYGQGGYPPGDGGTGAPGCDGHC >gi|302034488|gb|GL383263.1| GENE 4 3734 - 4927 1411 397 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 397 1 407 407 548 67 1e-155 MAKAKFERTKPHCNIGTIGHIDHGKTTLTAAISKVLHDKYPELNEESPFDQIDKAPEERQ RGITISIAHIEYQTEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMPQTRE HVLLARQVGVPAIVVALNKCDMVDDEELIELVEMEVRELLTSQEFDGDNCPVVRISAFQA LQGDEKWTQSILDLMDAVDEYIPQPERDLDKPFLMPIEDVFTITGRGTVVTGRVERGVVK TGEEVEIVGIHEKTQKTTVTGVEMFRKILDEGRAGENVGVLLRGTKKEDVVRGMVLSKPG STTPHTDFEGQVYVLKKDEGGRHKPFFSHYSPQFYFRTTDVTGTVELPEGTEMVMPGDNT DMTVHLIHPVAMEDQLKFAIREGGRTVGAGRVTKIIK >gi|302034488|gb|GL383263.1| GENE 5 5091 - 6659 790 522 aa, chain - ## HITS:1 COG:Rv1069c KEGG:ns NR:ns ## COG: Rv1069c COG4425 # Protein_GI_number: 15608209 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Mycobacterium tuberculosis H37Rv # 12 499 85 561 587 295 37.0 2e-79 MVAVNVWLSTLFAYGIGGFIGRISRWLAEITRLHVTVSTSAVRGIRRSWYAILTLISLGM FIWCTRQQRSVSDAVGLPRKVWFAQTVGVLTGLVFFVTTVLLMRFIAHGIRTLYTGVHRF IAQPVLAVVVVALSVALLLWATNNVIVRTTANGVAHVMAQTNAQTAAGRTPPTSPLRSGS PASLQTWDGLGREGKDVVTDGPSAAMISDVMGKPAKEPIRVYAGLNAQRDYTAEARGVLA ELIRTGAFHRKVLVIQNGTGSGWVEEWSVSAVEYLTRGDCATATMQYSYLGSVGAFLLDR ESPKQGARALFTIIYNYWKTLDPQTRPKLYTSGVSLGSFGGQAAFASINDMVSKVDGAVW VGTPGFTPIWKDLEKHRREGSPEIVPVIGNGRVVRFIGNPREITHDHWGAPYPPWRSHTR IAYVQHPSDPVTWWSPEMIWAEPDWMRERAGNDVNPHILWTPWSSFWQVTADMTLATTPP GGHGHNYHSEFIPIWAAVLGISCDDNTVAAVAKAIPKTSAPR >gi|302034488|gb|GL383263.1| GENE 6 6733 - 6945 111 70 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLARRSTFAGQLRLASRAGYPCLGTHGTIWVVSATSFQYRRRAVFTCHDRTLPRCPDKKS LGLPLRWAEA >gi|302034488|gb|GL383263.1| GENE 7 6962 - 8641 1487 559 aa, chain - ## HITS:1 COG:DR1736 KEGG:ns NR:ns ## COG: DR1736 COG0737 # Protein_GI_number: 15806739 # Func_class: F Nucleotide transport and metabolism # Function: 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases # Organism: Deinococcus radiodurans # 2 520 98 638 678 242 31.0 1e-63 MATIAKQVRAEQGADSVVMLDNGDTIQGTPLTYLSAKQPDKLGHDEVMARAFNLVGYDAA NIGNHEFNYGIAELFRYHNDLKAPLLCANVIDVKTGKPLTQGSLMLTKNVAGHEVKVGIV AVTTPGSMVWDKANLVGKVDIADPVKTAARYSVRLRKDGADVVVVLVHAGLSEVQAAPVY HGLPENNATVLAKSVPEVDLVVIGHTHQDDPVEIVDGISGHKVVITQPDYWARSVSQVTI PLNFSATKATIRHDQITVRPRYTRDVEEDTEFASDSQLQTDHKATVRYVNSVVATSTETL TTERSMVEDTPILDFIGKVEADTVAKAIKGGTYNGIPVIAQVSPFSRTAAFPKGDVKIKD IAGLYVFDNTLAGILLTGKQLKDYLEYSAKYFKQVKKGAAVNPAPASEGGDTQADYQGKP VWDYNYDAVTGVTYSIDISRPVGARILGLSWQGRPVAHDQRFVLAINNYRMSGSGDYPHV TEAPVVWDEILEIRQLLIDTAMAMKTIDPKDFFDRNWFLTTTGETWPSSGKPGDGGTSGG SQPGSGSPNHPTTLPGTGV >gi|302034488|gb|GL383263.1| GENE 8 8647 - 8904 221 85 aa, chain - ## HITS:1 COG:no KEGG:PPA1871 NR:ns ## KEGG: PPA1871 # Name: not_defined # Def: 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor (EC:3.1.4.16) # Organism: P.acnes # Pathway: Purine metabolism [PATH:pac00230]; Pyrimidine metabolism [PATH:pac00240] # 1 76 1 76 648 136 92.0 2e-31 MHDNPLGTSLSRRALLAGSLGAGLAMTAVDRSFASPIPTVSDSTLSTAALTVLATTDIHG HVFDWDYFADAAFPPSGSVPRLPWV >gi|302034488|gb|GL383263.1| GENE 9 9007 - 10704 1556 565 aa, chain - ## HITS:1 COG:PA1794 KEGG:ns NR:ns ## COG: PA1794 COG0008 # Protein_GI_number: 15596991 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Pseudomonas aeruginosa # 11 559 8 555 556 558 50.0 1e-158 MAEPTGNPAESSSDFIHQVVRADIHQDTYGGRVQTRFPPEPNGYLHIGHAKAIVTDFGVA EDFGGTCNLRLDDTNPGTEETEYVESIVADIEWLGYSPAHVVHASDYFEQLYEWAKYLVR EGLAYVDDQSPETIREQRGGYGKPGIESPYRNRPAEESLDLLRRMRAGEFPDGSRCLRAR IDMQAENMWLRDPVMYRIRHQPHHSTGTEWCIYPTYDWAHGQSDAIEGVTHSLCSLEFNS HRPLYDWFLSHLPLDGPAPKQREFARLELTHTITSKRRLKSLVTNNIVDGWDDPRMPTLR GMRRRGYPAAAIRAFCQAVGTTKNNSVKAIEEFESFMRRELNATAQRRMAVLHPLKLVLD GWPTDDDGNPVVEWFQLVNNPENPDDGTRRVPFTGELWIEADDFREDPPRKFFRLSPGHE VRLRGAYLVTATDVVKNPDGTIAEVHASYDPQSRGGTAPDGRKVKSTMHWVSAGHAIPVT ANLYDRLFSAEIPGSQTGEALDDLNPHSRETLTEVMADPALANVAPGEVVQFERLGYFAA DHDTAVFHRTVGLRDEWAQLQKRQA >gi|302034488|gb|GL383263.1| GENE 10 10758 - 12251 1547 497 aa, chain + ## HITS:1 COG:AGl791 KEGG:ns NR:ns ## COG: AGl791 COG0008 # Protein_GI_number: 15890511 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 8 488 10 474 488 384 44.0 1e-106 MTDLHPARTRVAPSPTGDPHVGTAYMALFDKAWAQRTGGQFVLRIEDTDRTRLVAGSEDQ IYQTLEWLGLSPDESPLVGGPYEPYKQSERLDTYKPLVEKLIESGHAYRCWCSQERLKQL REERAAAKSPETGYDRMCLGMSKEERAKLPGFTETPVVRMLIPEDVDLEFDDLIRGTVRA PRPDDQVILKADGFPTYHMAVVVDDHLMGIDTVVRGEEWISSTPKHLLLYKWLGWEAPRF AHMPLLRNTDKSKISKRKNPAARLMWFREQGYLPEALRNFLQLLAYPTVAEGQEMEDFDS FVSRFDWGDVSTGGPVFDVTKLDWLNGQYIRSLDAEVLTDRVLDYADQMGQARQVLGRDL TQEDRCVIHAAMPLVRERLTLLSEALPKLAFLLTDDDALVFDGDSVAKLKAGADDIQHAA VEVLKGLDDFSADAIQAALRARLCDEMGIKPRLAFAPVRVAVTGSRVSPPLFEAMEILGK ESTLRRMQRFEAEIDQK >gi|302034488|gb|GL383263.1| GENE 11 12326 - 13930 613 534 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4920 NR:ns ## KEGG: HMPREF0675_4920 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 87 534 1 448 448 780 95.0 0 MLVTCYWALVWRTPVWDIDDLYFATRSGTPGGRIDWADFARLTVCDLVERNGRFSDMMVQ LVMAMGGWIRVPLILSSVTASLALWLMVRGLIRDLREVVSPGADLLAGIGAFLAPMAVIG FEPHMGGDTIMFIAANIGYMWSLALGIVSILLLWSQRGPNVDHGWVLWIAVVLSCVASIH HELNAPGIVGAIVAMALITPAGKWTTRWAVALIVAAVGNAARMGMPGLWARRHRVGDPYP YPKSTGEIPKRVSFIVHSVSHSLSNYPVVFFAIVLSVIALCLVVMRRGFHRRAIGILLAL FCVASVGLAAASLRIITVLAQRKLVGDIRLYFSATGVLSGVCFGIVMAILVVLTVMVARI PGCGMVGVSTGAAFGYYALPLIQGSPGGRTSFLGLVVFTVSALIWAWAAVGLMRGGTTQG DSCIPASESGARVMAVSETQLATVLAMVTTASCLGTGPLGAWEMLEGATLNGSVWRAVNA QLDAARRGERDTVVVPKALPAPDWLPDYAGRRGTTEARLHQYYDLPKNVTVVRR >gi|302034488|gb|GL383263.1| GENE 12 13911 - 15827 895 638 aa, chain - ## HITS:1 COG:BS_bioF KEGG:ns NR:ns ## COG: BS_bioF COG0156 # Protein_GI_number: 16080074 # Func_class: H Coenzyme transport and metabolism # Function: 7-keto-8-aminopelargonate synthetase and related enzymes # Organism: Bacillus subtilis # 241 628 2 382 389 218 33.0 3e-56 MRATGTLDDEPYHVSGAESLVAPGMIEQTVAGLTQRALAPGHTVKARQVRVSLDQLDVEP TIIPALPTELKECPDPVAARQYFVDVLSRFVPHPAEALRVLTEGPTMRGAAMVEAGTDRR LEADPLRGVRVTKFGDLTESAPGASLAHKKHHHEAVLLASKVAAAPGVLAEFCISDDPHY TRGYVCVDGVYTTVTNVKADGDPNGGRVILVDTARADPTTITTWLENHPVLIGPATASSQ KATSWHGHLCGRLNAWRAAGLERRPRTFCSAQDPDAVTTDGPALLFSSSDYLGLSTEPKV QQAMNNTVRRLGSSSGGSRLTTGTSVAHHQAEHEIAAWLGYPQAVFMASGYQANIATIQL LADPHVTVISDAENHASLIDGCRLARARTVVVPHADLDAIDTALDCVTTDRALVLTEGVY SMGGDVAPVGELVEIAHRHGALVVVDDAHGIGTVGPTGRGATEELPASQRPDVLLGTASK ALGVEGGFACVDETLATLMRNCARGYVFSSAPSPVVAAGVAAAVEYLRTDTRRVCSLQAN VAQARLLLAEADLIPPSAAHDRGPIIRIPVGPESRAVAAQEELARRGLMVGAIRYPAVAR GDAILRICLTARHTDEHIRILVTSLREVLDGALSDAPR >gi|302034488|gb|GL383263.1| GENE 13 16171 - 16407 130 78 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRIFCPATVVPSTRLCRVQDSLTWESGTPRGFRREERTPHWSQPHDPADPETARSRRSPP THALGCVAHRKPQNTTAH >gi|302034488|gb|GL383263.1| GENE 14 16385 - 16696 525 103 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843319|ref|YP_056546.1| 30S ribosomal protein S10 [Propionibacterium acnes KPA171202] # 1 103 1 103 103 206 99 4e-52 MAGQKIRIRLRAYDHEVIDSSARKIVDTVTRTGAKVAGPVPLPTEKNVFCVIRSPHKYKD SREHFEMRTHKRLIDILEPTPKTVDSLMRLDLPAGVDIEIKLP >gi|302034488|gb|GL383263.1| GENE 15 16708 - 17379 1139 223 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843318|ref|YP_056545.1| 50S ribosomal protein L3 [Propionibacterium acnes KPA171202] # 1 223 1 223 223 443 99 1e-123 MTNERTVKGVLGTKLGMTQLWDEHNRLVPVTVIQAGPCVVTQVRTPETDGYSAVQLGYGA VKAKNVTKPEAGHFEKAGVTPRRHLVELRTADASEYTLGQEIAADVFSESDFVDVTATSK GKGTAGVMKRHGFGGLRATHGVHRKHRSPGSIGGCSTPGKVIKGLRMAGRMGVERVTVQN LQVHSVDAERGIMLVRGAVPGPKGSLLVVRSAAKKAAKNGDAA >gi|302034488|gb|GL383263.1| GENE 16 17376 - 18281 1546 301 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|213961379|ref|ZP_03389657.1| 50S ribosomal protein L4 [Propionibacterium acnes SK137] # 1 301 1 301 301 600 100 1e-170 MNETKTIDVLDVKGKKAGSAELPGDLFDVNTNIPLIHQVVVAQLAAARQGTHATKTRGQV SGGGKKPWRQKGTGRARQGSTRAPQWVGGGTVHGPQPRSYAQRTPKKMVGAALRGALSDM ARDNRIFVVTSLVDGDKPSTKQAKAVLSGLAELRKVLVVLDRSDEIDWLSVRNLSEVHVL AADQLNTYDVVNARTIVFSQAGLDAFVGARSANTQALSAEPEVPETNVADQHPYGEDSFR GDNPPAGFDIKGNEDSMKFHEPSSPWYGRTIAEVWFRSAAAAEAAGFVNAVKSDSEKEDA K >gi|302034488|gb|GL383263.1| GENE 17 18278 - 18586 504 102 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843316|ref|YP_056543.1| 50S ribosomal protein L23 [Propionibacterium acnes KPA171202] # 1 102 1 102 102 198 99 1e-49 MSELKIRDPRDIILAPVVSEKSYGLLDQNTYTFVVKPTANKTEIKIAIEQIFGVKVTSVN TMNRKGKVRRTRTGVGKRPDTKRAIVTVAEGDRIDIFTGPVA >gi|302034488|gb|GL383263.1| GENE 18 18613 - 19449 1467 278 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843315|ref|YP_056542.1| 50S ribosomal protein L2 [Propionibacterium acnes KPA171202] # 1 278 1 278 278 569 100 1e-161 MGIRKYKPTTPGRRGSSVSDFVELTRSTPEKSLLVAKPKTGGRNNTGRITTRHIGGGHKQ AYRIIDFKRYDKDGVPAKVAHIEYDPNRTARIALLHYADGEKRYIIAPDGVGQGTVVVSG PEADIKPGNNLPLRNIPVGTTVHAVELRPGGGAKMGRSAGASVQLVAREGKYATVRLPSG EMRMVDIRCRATIGEVGNAEQININWGKAGRNRWKGIRPTVRGVVMNPIDHPHGGGEGRT SGGRHPVSPWGKPEGRTRNKKKASSRLIVRRRKSGKKR >gi|302034488|gb|GL383263.1| GENE 19 19465 - 19746 496 93 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843314|ref|YP_056541.1| 30S ribosomal protein S19 [Propionibacterium acnes KPA171202] # 1 93 1 93 93 195 100 1e-48 MPRSLKKGPFVDEHLAKKVTAQNEAGTHNVIKTWSRRSMVTPDMIGHTIGVHDGRKHVPV FVTESMVGHKLGEFAPTRTFKGHVKDDKKARRR >gi|302034488|gb|GL383263.1| GENE 20 19764 - 20225 746 153 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843313|ref|YP_056540.1| 50S ribosomal protein L22 [Propionibacterium acnes KPA171202] # 1 153 1 153 153 291 100 1e-77 MSKTERPSRRAALLGDRPGSYAIARHVRMSASKCRRVINLVRGMDAVDAVTMLKFQPQAA AEPIRKVIASAMANAEQTEGLRADDLYISQAFVDEGITMRRIRPRAKGSASRILKRSAHI TVVVEPKEARQARKKAKSGRPAAAAKSETEKGA >gi|302034488|gb|GL383263.1| GENE 21 20227 - 21036 1372 269 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843312|ref|YP_056539.1| 30S ribosomal protein S3 [Propionibacterium acnes KPA171202] # 1 269 1 269 269 533 100 1e-150 MGQKINPHGFRLGVTTDHKTRWYAEKQYAELVGEDVKIREWLHKNLERAGLSSIEIERRS ERVTIFLYAARPGIVIGRNGAEAERVRGELEKLTGKQIQLNILEVKSPETDAQLVAQGIA EQLAARVAFRRAMRKAQQSAMNAGALGIRIKCSGRLGGAEMSRSEGYREGRVPLHTLRAD IDYGFFEARTTFGRIGVKVWIYKGDVTGTRAERAAQKAARQAAQGGRGGRGGNRRGRGDR PDRRGGRRRAEAAKQSAETPAPQTENAGA >gi|302034488|gb|GL383263.1| GENE 22 21038 - 21457 740 139 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843311|ref|YP_056538.1| 50S ribosomal protein L16 [Propionibacterium acnes KPA171202] # 1 139 1 139 139 289 100 5e-77 MLIPRRVKYRKQHHPKRTGAAKGGTQLAFGDYGIQATEGGYLTNRQIEAARIAMTRYIKR GGKVWINVYPDRPMTKHPAESRMGSGKGTPEWWIANIKPGRVLFELSGVPEDVAREAMRL AIHKLPMKARFISREGGDN >gi|302034488|gb|GL383263.1| GENE 23 21457 - 21690 376 77 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843310|ref|YP_056537.1| 50S ribosomal protein L29 [Propionibacterium acnes KPA171202] # 1 77 1 77 77 149 100 8e-35 MPKLSAAELRQLSGEELRNKVRELKEELFGLRFQSATGQLENTARLREVRKDIARVYTVL QERNLNIVDDPDSTKEA >gi|302034488|gb|GL383263.1| GENE 24 21693 - 21965 452 90 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843309|ref|YP_056536.1| 30S ribosomal protein S17 [Propionibacterium acnes KPA171202] # 1 90 1 90 90 178 100 1e-43 MSENTAERTTRRKVREGLVVSDKMNKTITVMVEDRVKHPLYGKVMTKSVRLKAHDENNEA GMGDRVRIMETRPLSATKRWRLVEIIEKAK >gi|302034488|gb|GL383263.1| GENE 25 22562 - 22930 616 122 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843308|ref|YP_056535.1| 50S ribosomal protein L14 [Propionibacterium acnes KPA171202] # 1 122 1 122 122 241 100 1e-62 MIQQETRLKVADNTGAKELLCIRVLGGSKRRYAYLGDTIVCTVKDAIPGGNVKKGEVVKA VVVRTVKSHRRPDGSYIKFDENAAVLLKGDGEPRGTRIFGPIARELREKKFMRIVSLAPE VI >gi|302034488|gb|GL383263.1| GENE 26 22931 - 23299 615 122 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843307|ref|YP_056534.1| 50S ribosomal protein L24 [Propionibacterium acnes KPA171202] # 1 122 1 122 122 241 100 2e-62 MKSLKIKKGDRVKVIAGNDKGAIGEVLSVDPARERVVVEGVNIRKHHRRDMPTPQGGTTK GGIISSEAPIHVSNVQLVTKIDGKDVVTRVGYRRVDVTKRRPDGSEYAAQRSVRYLKKEE AK >gi|302034488|gb|GL383263.1| GENE 27 23296 - 23928 1084 210 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|213961424|ref|ZP_03389702.1| 50S ribosomal protein L5 [Propionibacterium acnes SK137] # 1 210 1 210 210 422 99 1e-117 MSTDAIAHEMPRLKKQYREQIRAAMQEEFGYRNPMLIPGLEKIVVNMGVGDAAHDSKVMD GAIRDITAITGQKPQVTKARKSIAQFKLREGQPIGCHVTLRGDRMWEFADRLLTLALPRI RDFRGLNSNQFDGKGNYTFGLSEQVMFLEIDQDKIDRIRGMDITFVTTAQTNEEGKALLK HLGFPFKAKDDPKKAKTKRGPAYYAKKKKK >gi|302034488|gb|GL383263.1| GENE 28 23936 - 24121 331 61 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843305|ref|YP_056532.1| 30S ribosomal protein S14 [Propionibacterium acnes KPA171202] # 1 61 1 61 61 132 100 1e-29 MAKTALKVKAARKPKFGVRAYTRCQRCGRPHSVYRKFGLCRICLREMAHAGQLPGVTKSS W >gi|302034488|gb|GL383263.1| GENE 29 24281 - 24688 683 135 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843304|ref|YP_056531.1| 30S ribosomal protein S8 [Propionibacterium acnes KPA171202] # 1 135 1 135 135 267 100 2e-70 MTMTDPIADMLTRLRNANQAYHDQTSMPHSKIKAGIAGILKSEGYIADYKVNEPKEGEVG KTLTLTLKYGENRERSIAGVRRISKPGLRVYAKSTALPKVLGGLGIAIISTSQGLLTDKQ AHEKSVGGEVLAYVW >gi|302034488|gb|GL383263.1| GENE 30 24717 - 25259 921 180 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843303|ref|YP_056530.1| 50S ribosomal protein L6 [Propionibacterium acnes KPA171202] # 1 180 1 180 180 359 100 5e-98 MSRIGRLPIAVPSGVEVKLDGQYVEVKGPKGTLNFTVREPITVSKNDEGAILVERPDDER ENRSLHGLTRTLINNMVIGVTEGYEKKLEIQGVGYRVLSKGPKQLEFNLGFSHPVIVDAP EGITFAVENPTKFSVQGIDKQVVGETAANIRKIRKPEPYKGKGVRYEGENVRRKVGKAGK >gi|302034488|gb|GL383263.1| GENE 31 25261 - 25644 615 127 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843302|ref|YP_056529.1| 50S ribosomal protein L18 [Propionibacterium acnes KPA171202] # 1 127 1 127 127 241 100 2e-62 MASTLTVRKSLSDRAKARARRQARGRKKIFGTVERPRMVVTRSSKHVFVQVIDDVAGNTL VSASTMEAELREMSGDKTAKAARVGTIIGERAKAAGITKVVFDKAGNQYHGRIAALADAA REAGLDF >gi|302034488|gb|GL383263.1| GENE 32 25669 - 26316 1070 215 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843301|ref|YP_056528.1| 30S ribosomal protein S5 [Propionibacterium acnes KPA171202] # 1 215 1 215 215 416 100 1e-115 MSGTQRRGGGAGGERRGRDNRRGQNDRNRNQNEYLERVVAINRVAKVVQGGRRFSFTALV VVGDGEGSVGVGYGKAKEVPAAIAKAVEEAKKHFFKVPLVGRTITHPVIGEKAAGVVMLR PASPGTGVIAGGSARAVLECAGVHDVLAKSLGSSNAINVVHATVDALQQLEEPEEVARRR GKSVEDIAPAAMLRARKEADEAAAAARMEEKAGVN >gi|302034488|gb|GL383263.1| GENE 33 26316 - 26498 300 60 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843300|ref|YP_056527.1| 50S ribosomal protein L30 [Propionibacterium acnes KPA171202] # 1 60 1 60 60 120 100 5e-26 MSKLKITQIKSGIATKPNHRETLRSLGLKRIGDTVIKEDRPEFRGMVRTVRHLVTMEEVD >gi|302034488|gb|GL383263.1| GENE 34 26500 - 26940 752 146 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843299|ref|YP_056526.1| 50S ribosomal protein L15 [Propionibacterium acnes KPA171202] # 1 146 1 146 146 294 100 2e-78 MAIELHDLKPAPGAHKAKTRVGRGEGSKGKTAGRGTKGTGARKNVPEFFAGGQMPIHMQA PKLGGFHNPFRTEYQVVNLDKVEALFPKGGKITVDDLVSVGAVRDNELVKVLGTGELTVK VDLVVDAWSKSAQEKIEKAGGSVTKR >gi|302034488|gb|GL383263.1| GENE 35 27054 - 27287 137 77 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRQHDVINEATHHVFEHNRPFSQCALPVASGPPASVTTFHAARLAATHRCEVITAREPHG VRDHTPRPRERLLRLNK >gi|302034488|gb|GL383263.1| GENE 36 27290 - 27460 65 56 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4896 NR:ns ## KEGG: HMPREF0675_4896 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 56 1 56 56 100 100.0 3e-20 MLASYALDPRNAFNQTNLKAINQSLTNYNINPDMGAVRAMVEDGLPPLELGLDPTW >gi|302034488|gb|GL383263.1| GENE 37 27454 - 27702 268 82 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4895 NR:ns ## KEGG: HMPREF0675_4895 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 82 1 82 82 143 100.0 2e-33 MVTRSTPYIGTHIGVSVRLVICRTTIGMIDSVAIGVWSAVRQYSAADRIVSFLFTGTPKN LTNYGAATFQTTRAEDFGYVKI >gi|302034488|gb|GL383263.1| GENE 38 27896 - 29599 1756 567 aa, chain + ## HITS:1 COG:ML1121 KEGG:ns NR:ns ## COG: ML1121 COG0747 # Protein_GI_number: 15827554 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Mycobacterium leprae # 9 567 8 556 557 291 34.0 3e-78 MRKAIVTPVAVLAVLVMALTGCGQKNQSGGSKQSGVTSESAPMAQLNVVDRGQLKDGGTL RLAIEQLPTEWNPLNVNGDTADLGTTIWRFVGATNFDITEDGTPKPNPNYIFSTDVETKG GKQVVTLHLNPKAKWNSGRTIDYTDYRATWKANSGFAPDFLPASTDGFNQISSVEKGAKD TDVVLTFKTTYPDWTTVLSTVLPKEGVKDPHTFNDGWKTLNPDWLTGPFIPMKVDEASKT LTVKRNGKWWGDKSKLDTVSFKAMDSATQTKAFANKEIDAASNITTKDGYRTAQKRPDVE MRQAGSLQRRHFTFNTKSTMLSDKKVRQAIVKGINRPAIAKSDLAGLPVSPDTLMLGNHL FMPGQAGYRDNSAGYNYDPEAAKKGLGEAGWKKQGDYRVKDGKTLTINYAKLTGVPTSEN EGALFKQDMAKIGVKVNLVNTPSDSFIQTLSSHSFDVIAFTWGTAYPMANIRQIYGAAAE GSKQPSQSNFSQLLDPEVEKLISKIDTESDVSKRRELANQADKTIWDDVMTLPLYRRMSL TAVPKNLANFGASTFQTVRAEDIGFQK >gi|302034488|gb|GL383263.1| GENE 39 29781 - 30467 445 228 aa, chain + ## HITS:1 COG:SA0036 KEGG:ns NR:ns ## COG: SA0036 COG0584 # Protein_GI_number: 15925743 # Func_class: C Energy production and conversion # Function: Glycerophosphoryl diester phosphodiesterase # Organism: Staphylococcus aureus N315 # 1 189 19 210 210 125 34.0 8e-29 MSAFRAAVEAGIKWIETDVDIIGDGTAVLIHDSSLDRTTNCRGRYNELTASDLPAIDAGR WFSPQFIGEPLPRLADLIDFMNETGVNANIEIKSNEEGARSSLQLRDSVIAELERLKPGR QVIVSSFNHVLLSKFKEAAPQWDVACLYETAALYDDWRSMLELVGATYIHPEDSALTERS VVQFKEAGFRVNAWTVNRADRANQLFNWGVDGVISDVPDLLAGTVAAH >gi|302034488|gb|GL383263.1| GENE 40 30587 - 31906 988 439 aa, chain + ## HITS:1 COG:YPO1668 KEGG:ns NR:ns ## COG: YPO1668 COG0477 # Protein_GI_number: 16121932 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Yersinia pestis # 2 402 10 401 411 87 25.0 4e-17 MVLAGQLTYSAFEAFKGSLIVPLTETLGIRIDQFGILMGWLGIAMFLYVPGGWINNRFTV RSILCAWCTWRFVTGLILFSIPNLSFDVMIVIAASWGVWDAIGWPAVVNGVAFMSQDADK KGRGLAMGLLESIRRGVEFLMNVVVIGALALWSGHTTTVMRGFAIAYTLVLVPLIFALLR RVPKNAVAGDTAGKGESANVEALKGLVAVLIKPRMWLAGLAGLCVYWCYVNLIYSSAPYL SLVFKASDAVAGAFGIFNTGLLGIISGLVAGVLADYLFKSSTRMMGIALLITAIGTLAVR LLPVGDGMMWPAMILLMVMAFGIFMGKAVLLAPVAELNLPEHVNGSAMAVGSFLAYASIF WANPLTAGIIEKHRGNAYVGYHQIFMITLVVALGGSMCAFALDLMNMRVKKRDRQAVGIH AVGDVATSPAEPSTVSLRR >gi|302034488|gb|GL383263.1| GENE 41 31896 - 32534 473 212 aa, chain - ## HITS:1 COG:no KEGG:PPA1836 NR:ns ## KEGG: PPA1836 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 212 1 212 212 367 100.0 1e-100 MRPPIIISSHRGRIGVGVIVAVIIVLTILDLIRSGLAGLTNLPALLLFVWLVWIIWGVAE IRIDDEGVNIVNQFRIWDVPWRRITGVTGRWGLSLTAERRPDAEGMRKPRTISAWAAPAR GTATAMKGNADHIPQIIIDSETPMRWSLDSHSTARLIEMERIERHPSGAVASAEGHEAAG SGTKSYDGEIHVHPNWMTICVTVVLVATVIIV >gi|302034488|gb|GL383263.1| GENE 42 32704 - 34023 883 439 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 [alpha proteobacterium BAL199] # 10 437 19 437 447 344 44 1e-93 MLSAFANAFRTPDLRRKILFTLFILAVFRLGSVIPVPNVNVTNINTCVTQASSGSSAGLY SMISLFSGGALLKLAIFALGIMPYITASIILQLLTVVIPKLETLKKEGASGQNKITQYTR YLTLVLGLLQATAFVTLATSGRLFTCSLPVVYSTSVFEVVVMILTMTAGTTIVMWMGELI TDRGIGNGMSIMIFTQIAARFPDSLWSIKVARNGAGQAHAWFIFSMVIAIGLAVMAAVVF IEQGQRRIPVQYAKRMVGRRMFGGSTTYIPLKVNQSGVIPVIFASSILYLPVLYATFRPQ TSAAKWIGHYFTRGDHPVYNIAYFLLIIFFCYFYVAITFDPVEMSDNMKKYGGFIPGIRA GKPTEDYLAYVLSRLTAPGSLYLGLISMIPTLAFVSLHANQNFPFGGTSILIIVGVALDT VKQVESKLQQRHYEGFLSS >gi|302034488|gb|GL383263.1| GENE 43 34020 - 34589 738 189 aa, chain + ## HITS:1 COG:lin2760 KEGG:ns NR:ns ## COG: lin2760 COG0563 # Protein_GI_number: 16801821 # Func_class: F Nucleotide transport and metabolism # Function: Adenylate kinase and related kinases # Organism: Listeria innocua # 1 177 1 204 215 175 47.0 4e-44 MRLLIMGAPGAGKGTQATAIAEHYSVPAISTGDMFRTNIKNATELGKKVKAIMDAGDLVP DELTDAIVVDRLNQDDAANGFLLDGYPRNMHQVEALDAYLKEHGQRLDAVISLDVDPELL TQRLLKRAETEGRADDNEETIRNRMKVYSSQTEPLLEHYRSAGILVPVDGVGEIDEVRQR IFAALDSKN >gi|302034488|gb|GL383263.1| GENE 44 34594 - 35430 569 278 aa, chain + ## HITS:1 COG:BS_map KEGG:ns NR:ns ## COG: BS_map COG0024 # Protein_GI_number: 16077206 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionine aminopeptidase # Organism: Bacillus subtilis # 9 258 5 246 248 216 42.0 3e-56 MGRNRFQIKTPDQIRTMRRAGLVVAEGLEAMRAVAVPGATTADIDRAGRDVLEQHGARSN FLNYGGDWGLPPYPGVACVSPNETIVHGIPGERELKDGDIVSIDYGAIVDEWHGDAARTV LVGDVSEEARTLSEVTRESMWAGIAKVAPGARIGDISAAVQASLESHDGDYGIIREYTGH GIGTEMHMDPDVPNWGRAGRGPKIVEGMVLCIEPMATLGTEVTATLDDEWTVVTVDGSWA SHWENTVAVTSKGLWVLSEPDGGQAELEKRGVPFGPLD >gi|302034488|gb|GL383263.1| GENE 45 35645 - 35866 320 73 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15610598|ref|NP_217979.1| translation initiation factor IF-1 [Mycobacterium tuberculosis H37Rv] # 1 73 1 73 73 127 83 2e-28 MAKKEGALELEGTVVEALPNAMFRVELKNGHRVLATISGKMRQHYIRILPSDRVVVELSP YDLTRGRIVYRHK >gi|302034488|gb|GL383263.1| GENE 46 35945 - 36058 203 37 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843287|ref|YP_056514.1| 50S ribosomal protein L36 [Propionibacterium acnes KPA171202] # 1 37 1 37 37 82 100 9e-15 MKVQPSVKKICDKCKVIRRHGRVMVICDNPRHKQRQG >gi|302034488|gb|GL383263.1| GENE 47 36437 - 36808 619 123 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843286|ref|YP_056513.1| 30S ribosomal protein S13 [Propionibacterium acnes KPA171202] # 1 123 1 123 123 243 100 5e-63 MARLIGVDLPRDKRLEVALTYIYGIGRTRATETLKATGISGDLRVHELTDDQLVALRDHI EANYHVEGDLRREVAADIRRKIEIGTYQGRRHRSGLPVRGQRTRTNARTRKGKRKAVAKK KAK >gi|302034488|gb|GL383263.1| GENE 48 36880 - 37287 693 135 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843285|ref|YP_056512.1| 30S ribosomal protein S11 [Propionibacterium acnes KPA171202] # 1 135 1 135 135 271 100 1e-71 MATAGHKGAPKTKVRRKEKKNVVAGQAHIKSTFNNTIIAITDPSGAVISWASAGTVGFKG SRKSTPFAAQMAAEAAGRRAMEHGMKRVDVFVKGPGSGRETAIRSLGAVGLEIGPISDVT PVPHNGCRPPKRRRV >gi|302034488|gb|GL383263.1| GENE 49 37318 - 37923 1034 201 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843284|ref|YP_056511.1| 30S ribosomal protein S4 [Propionibacterium acnes KPA171202] # 1 201 1 201 201 402 100 1e-111 MARYTGPLTKKSRRLGTDLVGNDKSFERRPYPPGVHGRGRTKDSEYSLQLREKQKARYAY GVLEKQFRRYYEEADRAQGKTGDVLLQILESRLDNVVYRAGLAATRRQARQMVSHGHFLV NGKKVNIPSYRVSTHDIIDVREKSKDLPPIVIARETFETRDVPAWLEVRPNKGRILVHQL PTRDQIVIDVNEQAIVELYSK >gi|302034488|gb|GL383263.1| GENE 50 38169 - 39185 1067 338 aa, chain + ## HITS:1 COG:MT3564 KEGG:ns NR:ns ## COG: MT3564 COG0202 # Protein_GI_number: 15843052 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, alpha subunit/40 kD subunit # Organism: Mycobacterium tuberculosis CDC1551 # 1 337 1 346 347 466 71.0 1e-131 MLIAQRPTLTEESISEFRSKFVIEPLEPGFGYTIGNSLRRTLLSSIPGASVTSIKIEGVQ HEFSTIEGCVEDVTEIILNLKGLVLSSEEDEPVAMYLRKTGAGEITAADINPPAGVTIHN PELHIATLNDDGRFEMELIVERGRGYVSSALNDDPNAEIGRIAVDSIYSPVLKVTYKVEA TRVEQRTDFDKLVVDVETKPSILPRDAIASAGKTLVELFGLTRELNVEAEGIEIGSGPVD EEYAESLGTPVEELNLTVRSYNCLKREGIHTVGELVSRSEQDLLAIRNFGSKSIDEVKEK LTELGLALKDSAPGFDPLAAAEAYDEANDDDYAETEQY >gi|302034488|gb|GL383263.1| GENE 51 39084 - 39329 87 81 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSCHGVGVSPATTPTKSTPNATNNTLATAKKANPRGGCKGVAPLALNKSVLLSLRVIVII GLVVGLSCGEWVKPRSRVFEG >gi|302034488|gb|GL383263.1| GENE 52 39487 - 40023 893 178 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843282|ref|YP_056509.1| 50S ribosomal protein L17 [Propionibacterium acnes KPA171202] # 1 178 1 178 178 348 99 9e-95 MPKPTKGPRLGGSPAHERIILRNLASQLFEHGHVVTTVTKAKRVRPLAEKLINRAKTDTV ANRRFVNRTITDRGIVHILFTEIGPRMEGRDGGYTRVTRIGNRKGDNAPMAVIEVISDKV APKAPASAADAKAQINTATEAKDAEPEAPAEDAAAQAPVADEQKAAEVDEKAEEKPEA >gi|302034488|gb|GL383263.1| GENE 53 40133 - 41350 854 405 aa, chain + ## HITS:1 COG:MT1800 KEGG:ns NR:ns ## COG: MT1800 COG0438 # Protein_GI_number: 15841222 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Mycobacterium tuberculosis CDC1551 # 4 362 1 362 381 188 36.0 2e-47 MTTLRIAQLANFVGPVSGGMKVAIDALGKGYVAAGHERILVIPGPKDRITESESGITVEI AAPRVSAGYRMIATPWRALDILDRFRPTSIESSDKWTLTPAAGWASRRGIGSVLFSHERL DDMLTMWVRRQFGVAAAVGALNRRLSKSFDVVVVTSDYSAGEFADTGARLVKVPLGVDLE TFNPNKREPGLPTPRPDDILRLCYVGRMSHEKSPQLAVAAALELHRRGVPLRLDMYGVGP DTDAMKQQAGDAPVFFNGFVVGRDEVARRFAAADISMSVCPAETFGLASLEALACGTPVV TANRGGAHEIVDVTSGEAGSPDAVGLADATQRLAARLGPELRDAARHRAEQFTWDASVET MLMIHSEIAARPDAKPYWKQRLVNRRNARRDPQDPLAPTDDSQEQ >gi|302034488|gb|GL383263.1| GENE 54 41350 - 41982 416 210 aa, chain + ## HITS:1 COG:no KEGG:PPA1823 NR:ns ## KEGG: PPA1823 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 210 1 210 210 403 99.0 1e-111 MRKIPLVLAGVAAAVTPVVLAAPGPEPAMPDGPAGRPVRTVDDAVAACRASGKAGWELVD EATQLVHRMYTHYSCWHLWLSPETSLAAGHGHSGQYNIVLGKILEQLGFQVRPVHAARVR LDHHPWYHTGHSWLRVIHQGKELDVCASRPGNTAGNVAFVPVTEVLDRTRLNSIDTALAL APIVVASVWKSWLTGSGIQSWMYRPFGLSA >gi|302034488|gb|GL383263.1| GENE 55 41998 - 43371 1092 457 aa, chain - ## HITS:1 COG:ECs0048 KEGG:ns NR:ns ## COG: ECs0048 COG0477 # Protein_GI_number: 15829302 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 42 450 26 433 443 256 37.0 8e-68 MAANIPLTNTASLTPDTQLASAPISPESRRFLRHVTAATAFGGGLDGFDLGVISVVILHI NHDLELTPAMEGLVGAASLLGIFIGAPLFGFLTDKFGRRRMFLVDIIAFIVIGVGQAFAT GGVSLGILRFLLGMAIGAEYSIGAPMLSEFVPARERGSKLAFLELCWRIGFLIAVLLGYA LLWSGVSWKVILATSVIPALIVLGLRIGLPESPRWLLRHGREAEAREIVEKHMGPKYFAA EQLSDESVDGKGYRKLFRKGQRRRTIFVCIFWTCIVTPYFAIFTYAPKVLESLNVKSQAG GTILSNTIGVVGAVVGLLAIDRIGRRRMLIGPFWMQTAVLLIVGLWTDAPPWVLVVGLAL FALVNSYSDILTAVYPSEIFDTDIRSSGVGFGSAVSRIGAFLGTYLLPIGIGTIGVKWCM VIAAGLCVVGAVTGQTLAPETMNRPLTKTATGELSHA >gi|302034488|gb|GL383263.1| GENE 56 43265 - 43462 58 65 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|314924144|gb|EFS87975.1| ## NR: gi|314924144|gb|EFS87975.1| conserved domain protein [Propionibacterium acnes HL001PA1] # 1 65 1 65 65 124 98.0 3e-27 MTWRRKRLDSGEIGADANCVSGVKLAVFVSGMLAAIVAAPSGGGQCTTKQCRADPSVDRY ALPWF >gi|302034488|gb|GL383263.1| GENE 57 43707 - 45116 524 469 aa, chain - ## HITS:1 COG:no KEGG:PPA1821 NR:ns ## KEGG: PPA1821 # Name: not_defined # Def: putative sialidase # Organism: P.acnes # Pathway: not_defined # 1 469 1 469 469 725 97.0 0 MADDGARLLAMQSNFYDTPEVTWASDAAGTPSVTAPGRHGEVTLATLAAPGTKASPDGSS VTVDSTADADGTSASTISSLTASVDLGAEGGVQKVRFVDQHRRGLLTAGGLYDLRVSHAW SHTGTFPITVKLSDGRVLVTSVAVRDGAPAQPTGPVVGPCDKPTVSFPSGSSVRDDSRLG VSFTHLTPNTWVDVLIDGTKIGTVHTNASGSGTQDVPITYQTPSGAHLLRIAGPDGRFVE KVFTVTSKTPPFLNAITSGVTAKASSEASNETAPNGRASAAVDGNPNTFWHSRWEAPVAT YPHTLTVDLGRKYALSAMRWVSRRGNPNGRVKTLVLEFSTDGSHWTGRQPVALPSSSYPT IVSLPKQADARYVRITMASPQDASQPFAAIGEVTFAGLANGHADQPRHDPTAHTWAPPAH CQVTPEPSPTGRPTTIQPTATPASGSTATPTGTASQASTRPTRLPATGR >gi|302034488|gb|GL383263.1| GENE 58 45345 - 49601 2713 1418 aa, chain - ## HITS:1 COG:CAC2514 KEGG:ns NR:ns ## COG: CAC2514 COG1874 # Protein_GI_number: 15895779 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase # Organism: Clostridium acetobutylicum # 447 987 447 975 982 220 30.0 2e-56 MSNQPGPLRGTANLARSKQWLHAFDAIARKHQVTTGGGSLLMYQVENELLDESSDRSAFL KALTSYVRADGITVPLFTNDYSMAGHFSDTSKYGTDFYAYDSYPLGFTCNGKRNALSDHE AEFRAIAPTTPQFITEAQGGAFTPWGAPFTSSACAKFADPAFTRQWGVSTIGNGVTAFNY YMLEGGTNWGWTGAPASGFTSYDYGAALDEERTLTDKFAVQKEIGYFQRALPWLAATNPV SAPEPTDVKGSPVHAYQRTTGATGPRFIGFRLGDSNATTDTTFTTPLDLDSDGSANRQHV VDDRDSAISYQGSWVQRSDPGASGKTLTVSSRKGDTATLAFTGTGISVISGTGTDHGMVS LRVDGDAPVEATGHVDSDQNRPAQKVLHEFTGLSGGRHTLTVTNLGKPAQGGKGTIVSLD ALRVTDDSAADAHGEKPSNPARQWARVPQDTSTTLHLHGRDALMMTADFPIGNHKVLYTT SQPFGAPVVTSGRGTVEYLIGHRGDPGETVLQFKAGSSAPTVRGSGVRTVWNATTGQLRL NYTHTGTPSDIRIGEGDDALTLRVIDRQSARTTWQLESTLNGRTVHTDVEGAYLAGRAVT SGSTVALSGQMAEPGTVSIIPDATITSASWNGRPLPHFTDAPVPGPAAVSAPTLHWVSKT GAPEAAQGYDDSTWKVASSTTERTPWQKPTLGGAALDSNLLGFYEGSVWYRAHFTADTTR TLKLNANGGQGAPKPNGVDPAFMQVWINGTYAGAYRAVGNTTSIELPSSIKAGDPVVLSV VVHNLGQNLDWSDNGLSRQSRGLNSASLPAKGAVTWRVRGALSTEQTGDTARTMYNNGDL YGERAGWYLPGMPDKDWTAATTMTVDHPGIRWYRSTFNLSVPTGQDTTFQVVVKPSGNGK GPGGVGADHSQATIFVNGWNTGVYVGDVGPQTRFVIPAGFINLHGSNTIAVAVAAKEAGS GPASITVEPTHSVTGSLVGDLNKAPAYSPRTPDPATGTVPSLVPLPASLKTDSGAPFTLK DSTVIVAKGQASESAKFLATILRRSTGFPLPIVSSGSGHNSVISLTVDPHTRIGTYTRQE EAYSLVSRAGSMTARAVTSHGLFDAVQTIRQLFPPLIESTRPMMRSWTAPAVTITDAPRF SYRSIQLDPARSFLTVNEVRSVLDVMAAHKMSVLHMHLADDQGWRIQITNKGRAPGDTLD YTKLTSVSGHTAMDTQEYGYRDELGRTGFYTQQQYRSIVAYAAARHIMVVPKIDSPAHSN AMLHAFPELNSANSHPETTVYGTVPQNGTSAVGYSSLDVDNPKTWTALAHIFGQIAQMTP GPYLHIGADESHSTPHDQYVRFVTRVVNLVHSLGKKPVGWNEYSIGGVTAGDAIQYWVGD TENTRRAVRDRGAKLIISKSDAAYLDQKYTPDTAIGLV >gi|302034488|gb|GL383263.1| GENE 59 49598 - 50107 313 169 aa, chain - ## HITS:1 COG:CAC2514 KEGG:ns NR:ns ## COG: CAC2514 COG1874 # Protein_GI_number: 15895779 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase # Organism: Clostridium acetobutylicum # 51 167 45 162 982 139 52.0 2e-33 MRKAEHRHSLSRTMAALTAVACASTSLAATPGTAAATSPSQTPKAMSSTPYIFPGNDGKA HKVAWDKHSFTIDGTRLSIWSGELHYWRLPSQQAWRDVMRKARANGFNAISLYFFWGLHQ ESADGKFDFSGIKDIDTLLTIAEEEGLYVIARPGPYINAEISMGASPPP >gi|302034488|gb|GL383263.1| GENE 60 50354 - 50971 384 205 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent [Streptococcus pneumoniae TIGR4] # 6 199 5 201 201 152 41 9e-36 MAVYTLPDLDYDYGALEPHISGKIMELHHDKHHNTYVQGANTALEKLAEAREKGDFGTIN KLEKDLAFNLGGHINHSVFWKNMSPHGGGRPEGNELAAAIDEFFGSFDSFKKQFEETAKG VQGSGWGMLVWDVMGQRLNTMQLFDHQGNLPSTQIPVVQLDMWEHAYYLQYQNVKADYVT AWWNVVSWTDAEQRFVKARSITGLF >gi|302034488|gb|GL383263.1| GENE 61 51170 - 51622 -42 150 aa, chain - ## HITS:1 COG:no KEGG:PPA2364 NR:ns ## KEGG: PPA2364 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 148 1 148 164 241 100.0 5e-63 MSDRGSRPGRGAQKTITNTTTPGATRRDIHVDTESLSKLTQISMQSATHEHEGRMTICRD ELLQMTPSLITRLSRIKVISVRDPKVNVTLSRRSFLTRAAVITWRSPYQRHVKTSVSSHT ATHPGWCPEIRQNRASPACFRGVKPSPSLQ >gi|302034488|gb|GL383263.1| GENE 62 51852 - 52694 684 280 aa, chain + ## HITS:1 COG:Cgl1972 KEGG:ns NR:ns ## COG: Cgl1972 COG1131 # Protein_GI_number: 19553222 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Corynebacterium glutamicum # 7 280 3 270 285 262 51.0 5e-70 MSNMSDDPTGSRTIPQAAVSVPADTRPPGQPAVMIEGLTKRFGPKVAVDNLTMWVPRGSM FGFVGPNGAGKTTTLSMVTGLLRPDAGRVEVLGHDVWADPAAAKAQMGVLPDGMKTFDRL SGRELLRFCGMLHRLDEATINERAEGLLDALSLTSAADLLVCDYSAGMTKKIDLACAIIA DPAVLVLDEPLESVDPLSGQTIRSILRRFVDGGGTVVISSHVMELVESLCDSVAVIAGGR LHAIGALDDVCQGKSLQNRFVELVGGNANMGEGLTWLRRS >gi|302034488|gb|GL383263.1| GENE 63 52676 - 54289 991 537 aa, chain + ## HITS:1 COG:no KEGG:PPA1816 NR:ns ## KEGG: PPA1816 # Name: not_defined # Def: ABC transporter associated permease # Organism: P.acnes # Pathway: not_defined # 1 537 1 537 537 869 99.0 0 MVAQVLKHQWATTLVPLRKGAKPAEIFGLIFLVLVSLFLGGNYFAYVRAAGQLAIDPRGA STAVAGASLIVFWITVPVLFGAQPTYTDPSRYAVFSRRARELMPAFVVVGLLSWGGVVTL VASVSHVLAWSSAGAVAMVTAVLGVLLGWSAAMIASNLLLVAMSAVMAKRRFRETMMILV MLLCCGLGLGMQVVTRTATVTRTVPVNVGRIIGWTPLGWAWSMPWEVAHGRWLAFAIKLV VSIATVAVMVWAWQAIVARRLVAPTGDGGSVEKVKAANGIDRMMPATPTGAITGRTLRYL KRAPRMTSLFLNTFLVPLLASAPMLVHGGGEVHGPQTALIFTAIPFAAMLVATPMYAGSL ISYDGTALWHHIESSVTGVEDRRGRAIAYLLVTMPVSLALAVIASWWCGQWKLLPVVSAE ALGVLLLSTGIGSWTSVVNPMRVAESRKGNGFNSGSSVGAGCLGALLGMGAGILVAIPMI ALVVLVAISGHAWWSILLTFVGGLGWSFLVLHVGIVVGGRRLDRTWGEVLTKITPVA >gi|302034488|gb|GL383263.1| GENE 64 54382 - 55143 192 253 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 8 241 4 240 242 78 29 2e-13 MTGLLAGRTALVTGGTAGIGRGIAEVLALHGARVAVTGVTEERCAQAREDGLDVYQLDVR DKKACIRVVNDVAAECGGLSVLVANAGVYPQVRLADLDDDQIDFIFDVNVKGMMHVVQAA TPALRESGRGRIVVTSSITGNITGYPGWSHYGATKAAQMGFIRSAAMELAGDKITINAVM PGNIMTPGLKALGDDYLAEMAKSVPLGMLGEAKDIGEAVAYLASDGARYVTGQSIVVDGG QVLPEGPEALAEM >gi|302034488|gb|GL383263.1| GENE 65 55196 - 55957 469 253 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4871 NR:ns ## KEGG: HMPREF0675_4871 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 253 1 253 270 442 99.0 1e-123 MSRRQHVAVRTSATSRILLIITAMMGLLAFCWPLFLNPGGAADYETRTPFLFAAILPVVL AVVVSQLSSDGIDVKALAMIGVLTACGAALRTISPSMAGISFVFILMIAGARVFGAAFGF VLGTTTMFASALLTAGFGPWLPYQMIASGFVGLGAGLLPRARGRAEIAWLCGWGFVSAFV YGWLMDFAFWPFNLGTSTQLSFDPHASPLTNLWHFVLFNMATSMGWNLGRALTNVVCLAL LGGPILRVLRRAS >gi|302034488|gb|GL383263.1| GENE 66 55954 - 57609 998 551 aa, chain - ## HITS:1 COG:Cgl0519 KEGG:ns NR:ns ## COG: Cgl0519 COG1122 # Protein_GI_number: 19551769 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, ATPase component # Organism: Corynebacterium glutamicum # 18 527 34 543 569 472 50.0 1e-132 MSDVITLSNVSITHPGASTPTLKNINLAVAEGDLTLVVGRTGTGKSTLLGTLNGIVPHFS GGRLDGTVTVAGRDTRTHRPRELADVVGVVGQNPVAGFVTDTVEDEIAYGMEQLGISPSV MRKRVEETLDLMGIADLRRRALLSLSGGQQQRVAIAAVLAAQPRILVLDEPTSALDPTAA QDVLASITTLVHDVGLTVILAEHRLERVMHAADALWWLPGDGSVVQGRPEEVLARADVVP PLAALSRVMGWPTVPLSVREARRRVGPRPGLPRAPQPSEAMTWHGGGDEVLRVETLGVNY GQVCAVDALTTTVERGTITCLMGRNGSGKSSLMWAIQGATKSSGRVLVNHEGSWADPRKA DAATARRMVSLVPQSASDLLYLPTVAEECAQADKESEVPAGTTRAILSRLRVELPEDRNP RDMSEGQRLALVLAVQLSSRPDVVLLDEPTRGLDYAMKTELTRIVKGIAAGATGDPAAVL LATHDVEFAATTTDRTIVMATGHIVADGSTRSVCTSSPGFSPQIAKVFHPADVMTIADVE RLVNTPAGDRR >gi|302034488|gb|GL383263.1| GENE 67 57606 - 58625 568 339 aa, chain - ## HITS:1 COG:Cgl0520 KEGG:ns NR:ns ## COG: Cgl0520 COG0619 # Protein_GI_number: 19551770 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Corynebacterium glutamicum # 5 313 61 347 370 144 30.0 2e-34 MAFTVIIIRVFFQILMGGDGKGTVLFRLPEASLPNWAAGIRLGGPVTAEGLAATGYDALR LAGMLACFGAANSLANPRRILKSVPAALHDISVAVVIALSVFPQLIASAQRVRRARRLRG DTRKGIRALGAVIVPVLEDSVEMSMSLARGMESRGYGRTRDDRRVRPGTRVLLVVSVMAL TLGCYGVLANPTGSFSTDPSTCAPGSLCSWLLMDRMGQHIGTVLIVAGIIGSVIGLRISG RRLGVSRYRPDPWTWQATASCLCGAVAIVAMIWLSRANPKAITVSTSPVVWPPLEPAMLL LVVAAVFPGVFTPAPQRSTQADPEQAASWTSRQDEVPQL >gi|302034488|gb|GL383263.1| GENE 68 58741 - 58956 102 71 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313793307|gb|EFS41365.1| ## NR: gi|313793307|gb|EFS41365.1| hypothetical protein HMPREF9575_00836 [Propionibacterium acnes HL110PA1] hypothetical protein HMPREF9612_01531 [Propionibacterium acnes HL063PA2] hypothetical protein HMPREF9591_02445 [Propionibacterium acnes HL086PA1] hypothetical protein HMPREF9597_02437 [Propionibacterium acnes HL005PA4] hypothetical protein HMPREF9598_01755 [Propionibacterium acnes HL050PA1] hypothetical protein HMPREF9609_00092 [Propionibacterium acnes HL027PA1] hypothetical protein HMPREF9613_02014 [Propionibacterium acnes HL002PA1] hypothetical protein HMPREF9620_00064 [Propionibacterium acnes HL037PA1] hypothetical protein HMPREF9581_01657 [Propionibacterium acnes HL087PA3] hypothetical protein HMPREF9588_01705 [Propionibacterium acnes HL025PA2] # 1 71 46 116 116 120 100.0 2e-26 MAIPQPAAQAHHDHGWTVLVLLGAAATGISMTGSAVLVTNLDTVQRRFQSLSASLPSGTI LVYDQVRHGRR >gi|302034488|gb|GL383263.1| GENE 69 58937 - 59557 299 206 aa, chain - ## HITS:1 COG:PH1642 KEGG:ns NR:ns ## COG: PH1642 COG2813 # Protein_GI_number: 14591412 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S RNA G1207 methylase RsmC # Organism: Pyrococcus horikoshii # 13 201 6 193 198 94 30.0 1e-19 MSQSSHDDHSPTHYFTTPEGPTRTRTIAVNVWDDSMTMTTAGGVFSGTRLDPGTAVLMRS VTPPPSDGTFLDLGCGYGPIACALARACPGSHIVAVDVNDLAIDLTTRNAKALRVGDRVH ACRPEEVDPDLRFDEIWSNPPIRVGKAALHEILTTWLTRLSDEGVAHLVVGKNLGADSLT SWLCEQGFDAARVASAKGFRVIDVHA >gi|302034488|gb|GL383263.1| GENE 70 59554 - 60393 427 279 aa, chain - ## HITS:1 COG:MT3562 KEGG:ns NR:ns ## COG: MT3562 COG0101 # Protein_GI_number: 15843050 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthase # Organism: Mycobacterium tuberculosis CDC1551 # 1 267 21 296 297 204 48.0 1e-52 MTRWRLDIAYDGANFSGWATQPDRRTVQGELETWIPRVLRLDQPTPLTVAGRTDAGVHAR GQVAHVDLPDNVDTSAMLRRLSRVLTPDVVVKSVRPVPSTFDARFSALWRRYVYRLWDES SRPDPVTRFHVAPVRGHLDLDRLNTAGTSLLGLRDFAAFCKHREGATTIRTLLDCHAKRL DDPCGTVEVTVRADAFCHSMVRSLVGALTAVASGRRSQDWLDNVAASTSRASSVLVMPAC GLTLEEVGYPSDEDLAQRAAQARSRRSHNDICDTCWEDR >gi|302034488|gb|GL383263.1| GENE 71 60390 - 61061 596 223 aa, chain - ## HITS:1 COG:PA0382 KEGG:ns NR:ns ## COG: PA0382 COG0220 # Protein_GI_number: 15595579 # Func_class: R General function prediction only # Function: Predicted S-adenosylmethionine-dependent methyltransferase # Organism: Pseudomonas aeruginosa # 36 221 39 223 223 171 49.0 1e-42 MNVSQQRAMNTLASTYLIDVPRDATSTSVAPGSRLDLPAIFGRTAPLTVEIGVGSGDVLA ALAAAHPERDFIGFEVYLPSIATTLNKLENAGASNARVIMADATAGLDHLFGPADLDELW TFFADPWHKKRHHKRRIVNPDTARLVTSRLRPGGLWRLATDWDDYAHWMLEVLSAEPLLK PVDAGPDGFSPRWPERPVTRYENKGLTAGRTIHDLTWRRVDES >gi|302034488|gb|GL383263.1| GENE 72 61215 - 61418 146 67 aa, chain - ## HITS:1 COG:no KEGG:PPA1808 NR:ns ## KEGG: PPA1808 # Name: not_defined # Def: methyltransferase # Organism: P.acnes # Pathway: not_defined # 1 65 1 65 314 124 100.0 1e-27 MSKYSCSPTFDVDRRSITSAGEHFNHRVAQSHRLSFDPVRPDPAPLDPTDASPAQARRHQ PGLGVAS >gi|302034488|gb|GL383263.1| GENE 73 61606 - 61884 158 92 aa, chain + ## HITS:1 COG:no KEGG:PPA1807 NR:ns ## KEGG: PPA1807 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 92 6 97 97 127 100.0 1e-28 MSTATPVVSCSVTDCAFNDSGCTAFAVTVGGASGQPTCATVTHLDARAGLSSADGRVGAC QRIECVHNDKLMCTAQQVAISDAASCTAYQAR >gi|302034488|gb|GL383263.1| GENE 74 62004 - 62909 658 301 aa, chain - ## HITS:1 COG:no KEGG:PPA1806 NR:ns ## KEGG: PPA1806 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 301 1 301 301 564 99.0 1e-159 MTAPRHGEASDDSDVREDTDHIASALSQRCSSLARRILSGAGMATMVAHTMISAGESPEK WTCDLQAHGVTASGRFVVAQRSHPAQALCQVPAGLPTDVRLEISKDAPEPAIRLLAATLH VLGTITWLTPAQVDHLLATDVLPSEVSIIAGFDDALIGVVAPYRAILHDAMGSTEIDVPA LIDNIPDDKVFPSADDELSALDIVASLGNAHLSQLCDGVRKKTVFGCSCWSRTTHHACPH TVGRVFCADIDRTGLTLMYVNPDQTGAMFIPLEQDATSLTELEAAVTRLPLNSDPVRPTR V >gi|302034488|gb|GL383263.1| GENE 75 63060 - 65216 1164 718 aa, chain + ## HITS:1 COG:BH0785_1 KEGG:ns NR:ns ## COG: BH0785_1 COG4724 # Protein_GI_number: 15613348 # Func_class: G Carbohydrate transport and metabolism # Function: Endo-beta-N-acetylglucosaminidase D # Organism: Bacillus halodurans # 38 629 26 554 556 176 26.0 1e-43 MKRALIAGVAALVGLAALTPPAVADDSVAPVGAHALASAQPRNAGHRLQDIRTRSPQTDP YARYLRAEVPLQPRIPHDPSTQAHPELDAKAQVMLMQGDYGNSFFGNFRANDGFAHNVLN FWQYADYWSPWHGSATARTPQSLYDPATSDWRTRNFEFGVVDIPNPAYTNAAHRNGVKSI ATIYFDPAFRPGLTFKEAFDKDPTSRGCIIAEKLVEMAKYFGYDGYFLNEEEGNLQDSRF RPFMSYLTSKGLYTQWYTNTPGTWSSSKASLLDHGRIMNSVFLNYNWPGTQDRSVEAAKA EGYDPYQSLFFGVEANQAGFNGKHRSATELPSLYESRRNHSPKASVALFTPSDMYQRGLA DAVKPKGADKDVPLFQQDPYQWMVAERERMYFSGVTSNPKDTGAHPGHSRPEVGVADSSS WVGAADFIPARSVIGGRQFHTDFNTGHGMKWYSAGDVSAAASWTDMDAQSILPSWQWWID TEGTRPSVDFDYGPSDRRKDVHGAPVSLLYHQVGAWCGGSSLVVHGMMSKTTTLRLFKTR LAMTADTSMPITFRKSSKDHGTMKAALVFADDPGRVVTVDVPGSGVKGGWHTSTLRLGRF AGRTLTTLGLQFAPAPDYQMNVGAISVRDGSGVPAAPSEVQLDTVYDDGQAILSWHAAPF DDVAGYVVESMGPDGKIVHLASGYTDLAYLKAVPKKTGKVTFRVRAVGHDGQMSAPRR >gi|302034488|gb|GL383263.1| GENE 76 65213 - 65785 160 190 aa, chain + ## HITS:1 COG:no KEGG:PPA1805 NR:ns ## KEGG: PPA1805 # Name: not_defined # Def: endo-beta-N-acetylglucosaminidase family protein # Organism: P.acnes # Pathway: not_defined # 1 175 719 893 1082 342 98.0 5e-93 MSYDYSAQPRHIKVAEAATASKLLTDAVRPGVLDVTWDAKGVRVSTCRVDVHLVDIAKDD IDNQPYGLDVPCAAGGARVPVPIREGHPYDLTVTAGHGLGLSYRGHTHDSWAAPVTLDDI VVERKRSGFHMRNLTSPDWYGLQIMWKGTDGTSRKLTTIRRGGSVRGGWGTAPTTPPLSI PSPRPRGLSS >gi|302034488|gb|GL383263.1| GENE 77 65716 - 66300 125 194 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4862 NR:ns ## KEGG: HMPREF0675_4862 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 6 194 176 364 364 286 100.0 2e-76 MGHCPDDPTAFHSFPSSQGTLIMKVTDYAGNTTTQHFAVKNNDLVRPAIAPRFTVVEPAR QRVTVSHPIIPVRISVSGDQPVSWRLRGALPAGLRWTNDMSVNGLTSLAATLSGSPRSAG NHRIVVEASDLFGNTVTRSVVVEAARGSAPSSSGGSSGPSASASADSAIRPGWDSSSSAS SGSTRPVRMPLTGC >gi|302034488|gb|GL383263.1| GENE 78 66574 - 67059 764 161 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|213961349|ref|ZP_03389627.1| ribosomal protein L13 [Propionibacterium acnes SK137] # 15 161 1 147 147 298 99 8e-80 MRDPTYGTEFEKVPVTTYSPKAGEVQRKWYVIDAEDIVLGRLATTAANLLRGKHKPQYAP HIDTGDFVVVVNASKIALTGKKATDSLRYDHSGRPGGLRVTSIGEMLAKNPRRAVERAVW GMMPKNKLSRQQLKKLKVYGGPEHPHAAQNPQPYEITQIAQ >gi|302034488|gb|GL383263.1| GENE 79 67082 - 67603 880 173 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|213961461|ref|ZP_03389739.1| ribosomal protein S9 [Propionibacterium acnes SK137] # 1 173 1 173 173 343 99 3e-93 MTDTPTENLENTEVTPFTEGDREIAYRTDSNPTVAAGDSKRPAMIAPGAATGRRKEAIAR VRITPGSGQWKINGRTLEDYFPNKVHQQIVTEPFATAGVEGAYDVIARIGGGGVTGQAGA LRLGIARALNNVDPEASRPALKKAGMLTRDARVKERKKAGLKKARKAPQYSKR >gi|302034488|gb|GL383263.1| GENE 80 67830 - 69182 1199 450 aa, chain + ## HITS:1 COG:Cgl0567 KEGG:ns NR:ns ## COG: Cgl0567 COG1109 # Protein_GI_number: 19551817 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Corynebacterium glutamicum # 1 444 1 444 447 412 58.0 1e-114 MARLFGTDGVRGVANQDLTAELALDLSVAAAHVLGEAGAFGHRQPTALVARDPRASGEFL EAAVCAGLASAGVDVLRVGVIPTPAAAYLVNEYRTDLGVMLSASHNPMPDNGIKFFSRGG VKLPDDLEDAIEQRMGEPWARPIGDKVGRIRYTPQAVDTYVDHLVRSLRQQDTLKGMKIV LDTANGASFHTATAAFTTQGAEVIAIHDQPDGLNINERCGSTHPEKLQAKVVEVGADMGL AFDGDADRCLAVDHEGNIVDGDHIIAILALALQEDHRLASNTVVATIMSNLGLIIAMRAH DIHVDQTKVGDRYVLESMNANGFSLGGEQSGHVIMSEFATTGDGVLTGLHLAARVARTGK TLKELASVMTRLPQALINVRGVDKLRAGIDPDVNKAVADANQKLGDAGRVVLRPSGTEPV VRVMVEAGTQEEADQICSELAETVKMSLAL >gi|302034488|gb|GL383263.1| GENE 81 69294 - 69941 378 215 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4858 NR:ns ## KEGG: HMPREF0675_4858 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 215 1 215 215 400 100.0 1e-110 MSQVATTAIGDIPLVLIAEELGGHHRDDWELVADELVTRMVRSLFDGATRLTDATLAAHV VVKVVGNQERAGRSFDYARPFVSNVTGQTVPGLVVALAWFDGDVELLNDAALAEVKDLDA AYRLGTERLASALVGELSFSRDGDVLVVAGSSWLVSSWPLAKGVGRPIANEFGDSVVVGI EAPDHVVVAPPGCEGQIDQALAASRIADPFPWHVM >gi|302034488|gb|GL383263.1| GENE 82 69986 - 70969 879 327 aa, chain - ## HITS:1 COG:MT1124 KEGG:ns NR:ns ## COG: MT1124 COG1072 # Protein_GI_number: 15840531 # Func_class: H Coenzyme transport and metabolism # Function: Panthothenate kinase # Organism: Mycobacterium tuberculosis CDC1551 # 14 327 5 312 312 313 53.0 2e-85 MNLTPTTPVDDDNTEPGPFIELSRESWAALSDSTEIDIDEATLDHIRGLGDPTSHRDVVE VYRPLTQLIHLYCMHTGALFDASNNFLQLTRHGMKRTPFVIGIAGSVAVGKSTVARLLRE LLGRSPRRPVVDLVTTDGFLYPNRVLEERELLSRKGFPESYDRKALLRFVVDVKSGMPEV TAPVYSHVTYDIVPNQQLVVRQPDILIIEGLNVLQPPRPRSSGTMGLALSDFFDFSVYVD AEEADIIRWYINRFLTLRQTAFTDPHSFFGEYARMPDNEAITIAKEIWDTINGPNLVQNV LPTRGRATAILHKGPDHEVRNVWIRKV >gi|302034488|gb|GL383263.1| GENE 83 71100 - 72113 826 337 aa, chain - ## HITS:1 COG:Cgl0080 KEGG:ns NR:ns ## COG: Cgl0080 COG1075 # Protein_GI_number: 19551330 # Func_class: R General function prediction only # Function: Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold # Organism: Corynebacterium glutamicum # 92 315 91 308 324 91 31.0 3e-18 MKKNWLLTTLLATVTIAMGTTTTAFASPPTDITPEHPGGVTAPHSPDGIPSNIEGPSTPS WTSAIRFAMKNPGAKVPGTNDFACKPRKGTHPVVLIPGTSEDAFITWSYYGPHLKAAGFC AYTFNYNPETHPLVEAAETSGNIYSTAAFMAHFIDRVLKTTGAQKVDLIGHSQGGGPLPR AYIKYYGGAKKVHHLVGLVPSNKGTSMLGLEKFLNASGNPLNTIFNAVAQFHNLGSLPQQ LQDSTFLRELNADGMTVPGITYTVIATRFDNRVFPWTNTFINEPGVKNIVIQDVCPLDHS AHTNIPYDPMTFQIVINALDPERAAPVICTIRPFRPR >gi|302034488|gb|GL383263.1| GENE 84 72019 - 72258 98 79 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|282855140|ref|ZP_06264472.1| ## NR: gi|282855140|ref|ZP_06264472.1| hypothetical protein HMPREF9206_0375 [Propionibacterium acnes J139] hypothetical protein HMPREF9206_0375 [Propionibacterium acnes J139] # 1 79 1 77 77 130 88.0 4e-29 MSVGGLAKAVVVVPMAIVTVARRVVSNQFFFMDLLRCICIYGCWLSCRQGVRRWPHDKVW GLRYEGPTVGLGRYQVISR >gi|302034488|gb|GL383263.1| GENE 85 72248 - 73267 891 339 aa, chain - ## HITS:1 COG:Cgl0080 KEGG:ns NR:ns ## COG: Cgl0080 COG1075 # Protein_GI_number: 19551330 # Func_class: R General function prediction only # Function: Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold # Organism: Corynebacterium glutamicum # 83 314 78 304 324 75 29.0 1e-13 MKRSKRIAAALTSLTTIVATAFATISAAPAHAADSDTSVPPEITMPGSPDGIPSAGNGPI KLFTYPASVYALAHPGTNPQGANNFSCKPREGQNPVVLLPGTNSDAYASWSMYAPKLTKL GYCVFSPNFNGLKLLPNFAYTGDIRVSAKAVSGFVDRVLTATGSKKVDLIGWSQGGGPLP NYYITKLGGDKKVSKLIALAPSNHGVGPRAVSRFVNESISEAKHKKIEATFAKAHIASYE QQLGFSNFNKELYGNGPVTRPGVKYTVIEGRYDDAVVPFTNAFLNEPGVKNILVQDTCRN DHASHVNFTYDVNVYQMAVNALDPDHAQPVTCVFQPFIG >gi|302034488|gb|GL383263.1| GENE 86 73443 - 75290 1434 615 aa, chain + ## HITS:1 COG:Cgl2219 KEGG:ns NR:ns ## COG: Cgl2219 COG0449 # Protein_GI_number: 19553469 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains # Organism: Corynebacterium glutamicum # 1 615 3 625 625 768 62.0 0 MCGIVGYCGHRQAERVIIDGLRRLEYRGYDSAGLAVVADGNLYRAKKSGKLTHLEEELAV HPLPESTQGIGHTRWATHGAPTDENAHPHMSFDGRVAVVHNGIIENFAALRAELESEGIT FSSETDTETAAHMLALEMQRRSSLTEAMGAVASRLEGAFTLVAVSPDAPDTVVAARRNSP LVVGLGQGENFLASDVAAFIEHTREALELGQDQIVVLTPDGVTVTDFEGNPSQARPYHVD WDLSAAEKQGHDWFMRKEIFEQPRAVADTLLGRWSDRGDLVLDEVHISPEELRRINKIVV VACGSAYYAGMVAKYAIEHWTRVACEVDLASEFRYRDPIIDPMTLVVTVSQSGETADTLM AIRHAREQHAKVIAICNTNGATIPRESDAVIYTHAGPEIGVASTKGFLTQVVACYLLGLY LAQVRGMKYGDEIRGVMSELDQMPGKIQEVLDEIEPVYELARVMAKEEEAVFFLGRHVGY PVALEGALKLKEIAYMHAEGFAAGELKHGPIAVIEEGTPVFVVVPPKGRDQLHDKVVSNI QEIRARGARTIVLAERGDDDVKPYADTFVGLPACSTLLQPLVAAVPLQAFACELATAKGH DVDQPRNLAKSVTVE >gi|302034488|gb|GL383263.1| GENE 87 75277 - 75495 82 72 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSEHLADHPRVALYSSLPPGDVADVHPDSDDHRVKIRGPVSSEHLATAARRTNGTSPKVS PGAPSLSELTPP >gi|302034488|gb|GL383263.1| GENE 88 75400 - 75747 284 115 aa, chain + ## HITS:1 COG:BH0518 KEGG:ns NR:ns ## COG: BH0518 COG0736 # Protein_GI_number: 15613081 # Func_class: I Lipid transport and metabolism # Function: Phosphopantetheinyl transferase (holo-ACP synthase) # Organism: Bacillus halodurans # 1 114 1 115 119 61 34.0 4e-10 MIIGIGVDVCDISRWEAAVQRHPGMVRKMLTHTEAVMPARSQAARFAAKEALYKALGGGE GLSWQDCEVVTDGEAVRFELRGSLARRAEELGVRRVHLSLTHDAGVAVAMVFCEG >gi|302034488|gb|GL383263.1| GENE 89 75838 - 77283 415 481 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225086616|ref|YP_002657886.1| ribosomal protein S15 [gamma proteobacterium NOR5-3] # 6 473 11 491 497 164 32 2e-39 MASVCTAEATRAAEQRWFDAHPGQDLMDIAAQAVARKAQELLLGGAVDEIMPDWAASQCV LVLVGGGNNGGDGLFAAAALAQRGWRVELAQVMGQPHEAGMAAALDAGCIRVSLGEVTSH SYDLAIDAVLGIGGRPGIPQSLERIDTWLRARQIPVLAVDLPSGLDANSGEVESCVHAAY TITFSSLKWCHIAHPAARYCGELEVHDIGLDFVDDDGECLDDVDEYCDLAEMASLWPVPG ALDDKYSRGVVGIDTGSEKFPGAAVLGVLGALRTGPGMVRFSGPSAIMAFILSRAPSVVI GEGRVQSWVIGSGWGTHDGNADRFSQRAAEGVPMVIDADALALLPAELPEGCLLTPHAGE LARMLRIERSQVVADPRGSAVRAAQRFGATVLLKGSIQWVARPDGGVRAALPGPAWTAQG GSGDVLAGMCGTLMAAGLPADDAALCAAGMQAATAISMPGPYAPDQIAELLPGTVTTVLS R >gi|302034488|gb|GL383263.1| GENE 90 77327 - 78466 659 379 aa, chain - ## HITS:1 COG:Cgl0462 KEGG:ns NR:ns ## COG: Cgl0462 COG0438 # Protein_GI_number: 19551712 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Corynebacterium glutamicum # 1 371 1 374 407 325 44.0 7e-89 MRVAIITESFLPQVNGVTNSVLRVLEHLSTHDHDAIVLAPGDAQTPHEYAGFPVIPLASL HWPGYQDVRVSTSPQWTMERYLSEFEPDVVHLAGPFMIGYKGAMAAASLRIPIVAIYQTD IPSYAGRYGLGKLEFYGWYRVRQIHSLAVATYAPSTFSRDQLVSHGVPRVDIWGRGVDKV RFHPSKRSQQLHDEWAPNGEVVIGYMGRLAAEKRVADMTNLADIPNTKLVIVGDGPARAE VEKQLPHAVFTGGLGGEDLPRAVASMDVFCSTGELETFCQAVQEAKACGLPVISPRKGGP IDLIDPSRTGWLYEPGDMTDFRSRVVDLVGDDYKRHAMGIAARASIENRTWENLCAELVE HYKEAIRLAGRSTRIRAVL >gi|302034488|gb|GL383263.1| GENE 91 78672 - 78863 101 63 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIRLPKLVSVGVLIVMLGGVLLSRPLWLIQVALSYSLSQVTRRVSDIEQRLEVGILARVT MIH >gi|302034488|gb|GL383263.1| GENE 92 78837 - 79061 89 74 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTMAVDRSKGDRRLNTRAQERRMMPDCRHTTRNRGHQSWGYNPNNDLFDVHRTKMQLTSS CDSSPNSVYHCYPC >gi|302034488|gb|GL383263.1| GENE 93 79060 - 79755 302 231 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 16 229 7 221 223 120 33 3e-26 MEVSAGGGSIVVSGVSHNFSTTHNRNLVLDDVTVSMQPGVMTLLHGVSGSGKTTLLNIMS GLLKPTSGTVFVEGSDIYSLSTSERDDIRLNRIGMIFQEHSLIVDFTVRENVELILRVRG FGSRSRVMAIEALERVGIAHLQDRYPRQLSGGEAQRVGIARAIAGDRPILLADEPTGQLD RRNSQMVFELLRALAEDEKGRTVVLSSHDPTAKEYAHRSCELVDGHLEDSC >gi|302034488|gb|GL383263.1| GENE 94 79755 - 82094 1084 779 aa, chain + ## HITS:1 COG:no KEGG:PPA1789 NR:ns ## KEGG: PPA1789 # Name: not_defined # Def: putative ABC transporter-associated permease # Organism: P.acnes # Pathway: not_defined # 1 779 1 779 779 1365 97.0 0 MWVWNLAALMLRSRKSWLRMVPMAVALLIMTVSLGVNRSINLSPEQSVTSTLGAADGLVS PGFSVLAGSSSPTVPINRWKVRQINPYLETQVSVKGLPEEVLYQESSMPGINTKGRYALI SGKWPTKPSEIVVTPSLRQGIGGKNKLVLEPGNYDLTIVGTVGATFDKSSREILARSGTW QAWPLTQKQAKISGLSGNYLIFFTSSDSAGTCSKVNDDLGSDPLDSDACTTREQLLSKEF APLSGKKIVEQYLAWFLVAGLGAGLAAAAATTSARRIIAPLTAMGVPRRKLALSLRVVTL FMSMATAAASLVTGELLVIAIRPLLARFSDNPLSPVSSPTMSAVTCLGAAIVTAVVMVTP SSQRERKVHGKRINVKMARLLAWSGAIVACALLVWASVAAKVSLISVAIVSALSSLAAGL VTPWLLALVSGRDVSPGRRLAASRALRSRGSWHGLFAGLTAGLVAATATGLLIVASLFAQ MNATSSTGIPHGMAYFLAEPGFSPSLPGNLVKQFDDDLHGARKVPMTYGSSDDRAGNSVA WWAFHNVDDVASIFPLTDRQRRQLQTAGSLRVTTDEQASSTEITVPRDLGWLGQIKVIGH GYTPPAKSSDSSVSRGFLYVGLSPNQEDTAYHWATTHHIDPSYVMAPRMAPKVPLPAATL VATGLFTMMTVIMAGSLARDERLAQRRLTAHLRRLGLTPRWVDGVIFFEVAMTCVVAVIA GTIGSLLALLATSRIMSGTMDLVHSGWWVVAALVGSVMVGSTLGATIHRPYSWNTTISD >gi|302034488|gb|GL383263.1| GENE 95 82446 - 84548 1569 700 aa, chain + ## HITS:1 COG:Cgl1415 KEGG:ns NR:ns ## COG: Cgl1415 COG0513 # Protein_GI_number: 19552665 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Corynebacterium glutamicum # 231 665 4 435 448 332 45.0 2e-90 MSNKKRNPKSFKADGSPKRRWTAAERAARGHKPRTRGGVRNGHTDSRGRNFEAWTPREDV RRDDAGGSRDRRFSQDRRNHEWSDGRQDRRYDRRDWDRRDDRRWPDDGEFRSHKSRRPGH HANRDWKRDDRRGSSWDRDDWREDRRGQRRDRDDHWDRRNGGRDFDRRDSRNWREDRHSW RDDRRDDRWPDRSDHRRDDWSRDDHDDDNMDWEATELTDLDVTGIDHEGGFSALGVPDEI VAALAKTGITDPFRIQIAAIPDAIAGRDVLGRASTGSGKTLAFGVPLLSRLSATPREDNR PRALILSPTRELAMQIADVLSSLASSMGLSTILIAGGMSYGPQTKAFKRGVDLVVATPGR LVDLLETGDADLSGVAVTVLDEADHMAELGFMEAVGSILDAIPADGQRLLFSATLDGAVN KLVRRYMHEPVIHEVDPDKGSVATMTHHAFQIKPHEKVGLMCEIANRSGHTIVFARTQRG ASRMAEQLREAGVMAGALHGGLTQGARARVLAAFKDGSLPVLVATDVAARGIDVDDVTLV LQVDPPMNFKDYLHRSGRTARAGHDGAVVSLVLPHQRRTMARLYRQAGVKPVEAQVTRGD DHVAEVAGCSPALGAPIDEKDYEALVAPKQQRGKKARDGKPRRGKGGRNRGGRGFDGGRH RGHDSRDHHDRGHDSRGHNFRGRDRRDIEAKYGRSGNDTW >gi|302034488|gb|GL383263.1| GENE 96 84558 - 85271 300 237 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4843 NR:ns ## KEGG: HMPREF0675_4843 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 237 1 237 237 433 100.0 1e-120 MASTPRRRWAWVLLLVVASLVIVGVYRKAVPQEGSTAYGQAAEALGDLPVKGRAPMTGYS RDQFGPAWSDNSDPALTHPWGHNGCGTRDDALARDLVGAKLKSGSRCRIVSGELHDPYTG RTIQWRRGRNTSAVVQIDHVVALGNAWVTGAQQLPMDRRQALANDPLNLLAVEGQANQNK GAGDAATWLPPHKSYRCDYVSRQIAVKRKYHLWVTSAERNAMIRVLSTCPNHALPAR >gi|302034488|gb|GL383263.1| GENE 97 85450 - 86343 761 297 aa, chain + ## HITS:1 COG:ML0377 KEGG:ns NR:ns ## COG: ML0377 COG0802 # Protein_GI_number: 15827106 # Func_class: R General function prediction only # Function: Predicted ATPase or kinase # Organism: Mycobacterium leprae # 129 252 11 141 161 100 50.0 3e-21 MDKQTSLQEAIPELAVAVPQDAAALARALDLEAQTVSTWLTQGLGIVARVGSQIVGLAHL VDDGGHADVTDLALTTPDDADVVAALIGGAEQIATELESRVLVVSGLKASPGPAYHYNSG WVRVLPTRVVVPTAEAMHAFGAALAAQLRAGDIVLASGDLGAGKTTLAQGIGRGLGVDGP VISPTFVLARRHAGSEGRPGLVHVDAYRLGSAAELIDLDLDETMDQAVTLIEWGAGIAED LGGSHLDVDIRRSGDPADETRVVYLEGFGPRWQDVDLSLLSELPLDTISPDQTGDNN >gi|302034488|gb|GL383263.1| GENE 98 86343 - 87002 296 219 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15827107|ref|NP_301370.1| putative acetyltransferase [Mycobacterium leprae TN] # 3 210 2 219 359 118 38 1e-25 MNTIVLGIDTSTAVSVGLARGSEVLVSLHYDDPRAHAEQLMPLIHRGCEEAGIALTDIAE VAIGVGPGPYTGLRVGVATGRVLAHLAGLTPHPVCSLDILARQWAGVDGEFVVCTDARRH ELYWARYDASGHRLDGPNVTRPEDLPKDLPIGGPGCLVRGLTPTPGSPEHLDAGVLAASW QAMPDVGLEPLYLRDPDATVPTARKATLTPTRLTLPGLR >gi|302034488|gb|GL383263.1| GENE 99 86999 - 87469 213 156 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227881166|ref|ZP_03999028.1| (SSU ribosomal protein S18P)-alanine acetyltransferase [Halogeometricum borinquense DSM 11551] # 1 142 32 176 181 86 37 6e-16 MMTRPARMADLDAVMAVEQASFDPAWSRASWAEGIAPADHRLTLVAGDDEVAAVATFHGF DVADLDRIMVTPAARGRGLAVELLARGLDWATSRGCHTMMLEVRRDNDPAISLYRRFGFE TISQRPNYYGGGIDALVMSVDLPRAETTTPSEENHV >gi|302034488|gb|GL383263.1| GENE 100 87462 - 88505 717 347 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229232313|ref|ZP_04356740.1| (SSU ribosomal protein S18P)-alanine acetyltransferase [Cryptobacterium curtum DSM 15641] # 2 336 515 850 860 280 48 2e-74 MSEPLILGIESSCDETGVGIVRGNDLLANEVASSMEQHVRFGGVVPEVASRAHLEAIVPV LDKAASTAGVDLSELDGIAVTAGPGLAGALVVGLSAAKALASWLNKPLYGVNHLAGHVAV DLLEHGELPMPCGALLVSGGHTSLLRVNDIATDIIEVGSTIDDAAGEAYDKVARVLGLPY PGGPVIDKAAAEGDPTAIRFPRGLTARHDMVKHRFDYSFSGLKTAVSRWVETQQRDGVEF RIADVAASFQEAVADVLTAKAVDMCQEYGLTHFLIGGGVAANSRLRTLLAERMADAGVEL RRPRPGLCTDNGAMIAALGVQVIKAGLPASAMDISADSGLPIETVLV >gi|302034488|gb|GL383263.1| GENE 101 88619 - 89110 507 163 aa, chain + ## HITS:1 COG:XF1262 KEGG:ns NR:ns ## COG: XF1262 COG0494 # Protein_GI_number: 15837863 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Xylella fastidiosa 9a5c # 3 162 10 166 168 193 60.0 9e-50 MMTPILTTLGFVMHPDAERVLMVHRIARPGDEQLGKYNGLGGKVEPGEDVVAGMRRELRE EAAIEVDAMRLRGTVSWPGFGRHGEDHFGFIFVVDSWHPLADAIPDANEEGPLTWERVDS LDELPMWEGDRYFLPLVFDPDVPQFHGCLPYHDGRPTGWSYSV >gi|302034488|gb|GL383263.1| GENE 102 89236 - 90405 988 389 aa, chain + ## HITS:1 COG:AGl2862 KEGG:ns NR:ns ## COG: AGl2862 COG0614 # Protein_GI_number: 15891542 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 12 388 7 374 377 263 36.0 6e-70 MNVTRTLGAIATIALTLGLGACAGGAQEKASSGHTPALSVTDVAGRTVSFDAQPKRILLA EGRALMVTSVLNKENPAKDVVAIGADLHKAAPSFESALRQARPQVSKLPMIGSIAKGDVT VENMLSFKPDAVVMTLDQKEAAEKAGFLQKMDRAKLPYVFIDFRRKPLENTTKSMATLGK IFGGKAVSRAKEFNKFYQSKVDDVSRRVSRDSDKPRTFLWRAAGLKDCCSTYANLNLGDV ITAAGGHNLGADLLWTSAGDVTPEKIVATQPEHIIATGGSWAKDPKKPESVPHVELGYNV TDDDAQRTLAGLLKTPGFSLLKAPKDGKLHAVYHQFYDSPFNVFALEQFAAWQHPKQFKG VDPTKDFAKFHEDYLPFGYRGVFFVTLKK >gi|302034488|gb|GL383263.1| GENE 103 90428 - 91507 907 359 aa, chain + ## HITS:1 COG:MA2149 KEGG:ns NR:ns ## COG: MA2149 COG0609 # Protein_GI_number: 20090992 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Methanosarcina acetivorans str.C2A # 13 353 11 352 355 253 43.0 5e-67 MSLAREDPATGMVAVVRGYYRRARWKRWAIVLLSVIAVAAFLVTIVVGPVDITLPQLLRA LVNPSTVDAQTRMVLWQLRIPSSVMAVLIGVCLSLAGAHMQTILDNPLAEPFTLGISAAA AFGAAASIVLDWTIIPNSQFNVAVCAAVASLVAVAIVAAVSRRREDGRESMILLGIALVF GFHALLALLQYRATPEALQQIVFWTMGSFQRATWTSNAIIAAVLAIAIPITIRHSGQLTA LRLGDERAAAMGVNVPRLRSRILILASLLAAVTVAFAGVIGFVGLVGPHVARILVGEEQR YFAPASAATGAFLLATAHALSITIIPGVAIPIGIITALVGVPVFVSLILTRHRVFGGAS >gi|302034488|gb|GL383263.1| GENE 104 91504 - 92256 185 250 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 17 220 27 247 563 75 31 1e-12 MNIRLSNLHLSYGQRHVLDGVSLGPLERGTVTGLLGPNGAGKSTLIKAIAGLKTPTSGEV IISDDDGHVSGAQLRDVVGYLPQDVLATASLTVLESVLTSARSRSKATVERAAHVLERVG IAHIAHRFISQLSGGQRQLVALAQMVVRDPQVLLLDEPTSALDLHNQIEVLRLVRRAADS GHRMAIVALHDLNLAACYCDRLVLLHEGGVHAEGSPSEVLTPDVLERVYGFRARVLSDGG IPVVRPVVTA >gi|302034488|gb|GL383263.1| GENE 105 92283 - 92936 24 217 aa, chain - ## HITS:1 COG:no KEGG:PPA1777 NR:ns ## KEGG: PPA1777 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 217 1 215 215 378 96.0 1e-104 MWVESSVETLHSHSPLSIRGATSTVVAVTTYENRSRFTQRLQSRGSKNTTSGGDPSRRSA GWYIHHFIGSAFQLGAMATTYYASRTEPLNWDAHTNISWALLFIAIIVTPGLLTFVESFV EPDGSGQDVVAGVTIMLALGSIITMGVLADTPIVTTPVPFSILLPVSLALTAIAPCSLPG SNPRADSMFTETHYGAWSSRWVAPVVCLILWIIRLAS >gi|302034488|gb|GL383263.1| GENE 106 92965 - 94164 599 399 aa, chain + ## HITS:1 COG:Cgl1200 KEGG:ns NR:ns ## COG: Cgl1200 COG0500 # Protein_GI_number: 19552450 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Corynebacterium glutamicum # 7 381 9 381 387 107 30.0 6e-23 MDYTVARRLVSSEGRKALELAGAEADPDSLLAATRLRQQIDGDLAAAVLDQISLRRRAVA KIGPVAASMLWTRDGLEQATRGDVSRWRAHRLKEAGFTHVVDLGCACGADARACLDTGLE VTAAEIDPVTAELARHNLPEAHVMCADAMAVFADFRARGNTVVMLDPARRTGRGRTWRLE DVQPPWSFVVTVLESVPAVVKLGPGVDRSQLPDLPVTYVGHRGDLVEATVWSGFEDQWPG DRAVLIEPAGIHELPGGSPAPAAGELGTFVAEPHPAAIRAGSLSAIDGSLHAVSEGIAYL TAEEPVASPWLTWFAVKEVLPLDVRALRSWVHHHHVGTVEIKKRGVDVDPVTWRRKLKPS GPNRVTVVCTPTTGRTKALVCDRVRLPCGLLGAGSDVMS >gi|302034488|gb|GL383263.1| GENE 107 94169 - 94963 336 264 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4832 NR:ns ## KEGG: HMPREF0675_4832 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 263 1 263 264 424 91.0 1e-117 MLTTRRSATYFFALLLAPLVLLSGCGKFNAGFVIKDEDHIDGTVAFGVLKSSVDRDGSGQ SEGLAKRLRGCSELTPPNASLTGKVKVKPFDDGTYVGCTVTGTMTATDITVQSGRPHSVA DPSTDVFRGHKENGPIGITFDNEIIRFHLDRSALFDFVPGVNSSGVGDMAGIGDFKVSVT FPGTVLSHSGSSKVDGDTVTWTDVSDLLSPDGLTASGKSQGGLPGWVWGIGALVTLASGG AVAAMIINRRWWARPRDGGAAPGS >gi|302034488|gb|GL383263.1| GENE 108 95013 - 96086 445 357 aa, chain + ## HITS:1 COG:no KEGG:PPA1774 NR:ns ## KEGG: PPA1774 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 24 356 1 333 334 494 91.0 1e-138 MGSEKLSAHLYGSYPYRSRSWFHMPMLNASRHMRRCLVLIIAPLLLLAGCAKFDTAMEIK DENHVHLKSTVGVSKSIASTSDDPLVSELSDCNNSKGSAGTGSDGKVEKFEDDNYIGCII AGETTAANLDKEVGMQITFDKNEVSFKMTSDLFRDSGRSDRTPDASMFSDFKVSVTFPGK VLSHSGSSKVDGNTVTWTDPNDLLFGSGLTATSKRSNGIPTWAWIVVAVAVLAIVGIVVV ILNKKKGQKAGQPENGGAPWTMQYPGDGQPQGQPQQWNGQLYQGDPYVQPPYQDPSYQDP RQQEPGQHWGNQPLGHVSGGATSAPQTGQNPIPYQGSQPGQQPPSNPDDFWKNHSSC >gi|302034488|gb|GL383263.1| GENE 109 96292 - 96588 381 98 aa, chain + ## HITS:1 COG:Cgl0581 KEGG:ns NR:ns ## COG: Cgl0581 COG0234 # Protein_GI_number: 19551831 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Co-chaperonin GroES (HSP10) # Organism: Corynebacterium glutamicum # 5 98 11 104 104 137 75.0 6e-33 MATTIKPLEDRVLVQPLEAEQTTASGLVIPDTAKEKPQEGKVISAGPGRVDDKGTRVPMD VKEGDVVIFSKYGGTEVKYDGQEYLLLNARDILAVVEK >gi|302034488|gb|GL383263.1| GENE 110 96600 - 98195 1499 531 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 [Haemophilus parasuis 29755] # 1 530 1 532 547 582 55 1e-165 MAAKQLQFDEEARRSLERGVDTLADTVKVTLGPKGRYVVLDKKWGAPTITNDGVTVAKEV DLTDPYENLGAQLAKEVATKTNDVAGDGTTTATVLAQALVHEGLRAVASGANPVGLKRGI EKAVDAVVEELRSISRAIDTTSDMASVATISSRDETIGALIAEAFDKVGKDGVITVDESQ TFGTELDFTEGMQFDKGYLSPYMVTDQDRMEAVIEDPYILIHSGKISSMNDLLPLLEKVI AAHGSLFIVAEDVDGEALSTLVVNKIRGTFSSVAVKAPAFGDRRKAMLQDIATLTGGQVV APEVGLKLDQVGLEVLGRAKKVVVTKDNTTIVDGAGDKADVEGRVIQLRAEYDNSDSEWD REKLQERIAKLAGGVCVIRVGAATEVELNEKKHRIEDAVSATRAAIEEGIVAGGGSALIH AAHVLDGDLHLEGDEKAGVQIVAKAVREPLRWIAENGGEPGYVIVSKVAEMEPGHGYNGK TGQYVDLIADGVIDPLKVTRSALANAASIASLLLTTETLVVDKPEEDNEDK >gi|302034488|gb|GL383263.1| GENE 111 98626 - 99195 343 189 aa, chain + ## HITS:1 COG:no KEGG:PPA1771 NR:ns ## KEGG: PPA1771 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 189 41 229 229 301 98.0 6e-81 MTAWLKTELTVTSRRLLARKSNTLLGVIPLGHDDAAMPLGSISEVGVNSKFHPGRAIMAI VWLVLMISMFNAHQPVLGVLALLLLIVAVLTTMDAELRVVNNAGSVTSLTVSALEKAKLQ SFKQEVEQRLYADQALLMHRESMNQAQNFATIQQAQMSALLAQGQLQNQLSNDKGQQPPT QMPNPNTQG >gi|302034488|gb|GL383263.1| GENE 112 99150 - 99362 104 70 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKFRVINEDGIASGGLFCVTDWPPSASATATPHTDRPTEPRRARPANRRGHLPDNSQPWV FGFGIWVGGC >gi|302034488|gb|GL383263.1| GENE 113 99445 - 101184 699 579 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 [Haemophilus influenzae 22.4-21] # 23 490 3 444 456 273 35 3e-72 MTSPVSANLEALVPTPLSLDQAIDNIVSPIATAISDAVFWAIPLPGGNEFPLILAWLLGA GLFFTIYLGFQQLRPASIRHSSHVMRGHFSRHTDPGDVTSFQALATELSGTVGLGNIAGV AIAIATGGPGASFWIAVAGLVGMSVKMAEATLGVKFRVINEDGTTSGGPMYYLRDGLASI GKPTLGRVLASLFAICTAFGVIGAGNMFQSNQAAYQLAMFAGGQDSWIGPHMWVVGVVFA ILVGIVIVGGASKIGAATSKIVPFMGILYVIMCLAVIGANISQVGSAFEAIWSGAFTGHG VAGGILGVLIVGVQRAAFSNAAGIGTAGIAHSAVKTRRPAQEGFVAMWEPFIDSVVICTM TAITIIITGVYRNSGADGVQMTAQALKTVAPWFSSLLTLAVVLFAFSTMLSYSFYGKKAV GYLFGNSTTAERIYNALFLILLVVGAATNMASILDLADAMLFLMALPNVLGMYFLARVVA REIKGHRERIDAGVIPQVPEDAQVGMMVVNEATPEQLENADTEYALRAAAQDARSKELQL GHTAPDTERDYLQHLPEDHEIFNTMDREGKPLKDQRHES >gi|302034488|gb|GL383263.1| GENE 114 101566 - 103008 616 480 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4826 NR:ns ## KEGG: HMPREF0675_4826 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 480 30 509 509 767 100.0 0 MGFVGSVMVTLWGWGSPQGGVPTHVRPVGVAVAVSGIAGLIAIIIAWLRSRKLVGRRVLT LVVWSLPLLFSPPLLSQDGWAYAAQGWILTQGMDPYRVPQGLAEVLGKAVDTPWQATTAV YPPGSLWIQAAVVKIAHADPTWSVMLMRVPALIGVALMVWAVPRLARYAGTDPDHALWLA VCCPLTTLSVVGGMHNDGLQVGLSLVALVVAIRLALIGRGWLGLVLGGAFVGLAGSVKQP GVLAGVGIVALVHVNAVRHGGRRWLTRNCWTALLARIAAGAIPALTVFGGISAIHGLGMG WLNSTAGSPVSVTSDSPIALVVQFLRGSGGIPLNRLIGPATGVSLTLTVAAMMWCWVRWG PIPPCHIRLGRIASRSRNAVNVVTGRIGSPLRLQAGVMIVFAAFGASLQPWYLIGPLALL ASVQLRRTHRDAVIGGVVATAILTMMQWYWSPYVCLPLVIVGYLIVWRIPKAWAFVTAAN >gi|302034488|gb|GL383263.1| GENE 115 103106 - 104620 1220 504 aa, chain + ## HITS:1 COG:Cgl0587_3 KEGG:ns NR:ns ## COG: Cgl0587_3 COG0516 # Protein_GI_number: 19551837 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Corynebacterium glutamicum # 211 501 1 291 292 352 64.0 1e-96 MTSDSRPTTIEELAPLALTFDDVLLQPVESNVIPSQVKTTTRVSRNISIAIPLVSAAMDT VTETRMAVAMAREGGLGILHRNLSIEDQAAMVDQVKRSEAGMIDEPITISPNATLADAEE LCHTYRISGVPVVDDKENLVGIITNRDMRFEDNPQRPIREVMTAAPLVTAPVGTSPSDAL SLLAAHKIEKLPLVDADGKLRGLFTLKDFVKTDKYPNATKDPQGRLRVGAAIGFFGNSWD RAMALVEEGVDLIVVDTAHGHTQGVFDMIARLKAEPAARGVDVVAGNIATYEAAKVLCAA GVDGIKVGIGPGSICTTRVVAGVGVPQVTAIFEASKAARQYDVPVIGDGGLQYSGDIAKA LVAGADSVMLGSLLAGCEESPGELAFINGKQFKTYRGMGSMGAMSARGEKLSYSKDRYFQ GDVTTNDKIVPEGIEGQVAYRGPLGAVAYQLVGGLRQSMFYTGARTIDELHERGRFVRIT SAGLRESHPHDIQMTVEAPNYSAH >gi|302034488|gb|GL383263.1| GENE 116 104654 - 105757 1079 367 aa, chain + ## HITS:1 COG:slr1722 KEGG:ns NR:ns ## COG: slr1722 COG0516 # Protein_GI_number: 16330504 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Synechocystis # 4 366 5 366 387 333 49.0 5e-91 MYDIGRSKRATRAYSLDDIALIPSRRTRGTEMVNLEWRIDALTFDFPIMAAPMDSVMSPA TAIEFGRLGGLGVLNLEGLWTRYEDPTPYLEELAGLSDDVATTRRMQEIYAEPIKAELIT ERMAEIRAAGVPVAGSLSPKNASRFSETVVNAGADFFVIRGTTVSAEHVANGDDVLDLRK FIYDLDVPVIVGGCATYQAALHLMRTGAAGVLVGFGGGATHTTRQVLGIQVSMASAIADV AEARRDYMDESGGRYVHVIADGSVGRSGDIAKAIACGADAVMVGSPLARATEAPGRGWHW GAEAWHPDLPRGARVHFEPVGTLAEVLNGPSRVPDGTMNLVGGLRQAMATTGYSEVKEFQ RIELTIR >gi|302034488|gb|GL383263.1| GENE 117 105815 - 106162 363 115 aa, chain + ## HITS:1 COG:AGc4890A KEGG:ns NR:ns ## COG: AGc4890A COG1605 # Protein_GI_number: 15889952 # Func_class: E Amino acid transport and metabolism # Function: Chorismate mutase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 2 103 4 105 105 115 58.0 3e-26 MSEVPDELVVLRGAIDNMDAALIHLLAERFRITREVGRLKAECGLPPADPAREAEQIARL RQLAVESNLDPEFAQKVITFIVAEVVRHHEAIADESGDDSRVADAGEADVPGSGS >gi|302034488|gb|GL383263.1| GENE 118 106171 - 106743 528 190 aa, chain - ## HITS:1 COG:BH0110 KEGG:ns NR:ns ## COG: BH0110 COG1045 # Protein_GI_number: 15612673 # Func_class: E Amino acid transport and metabolism # Function: Serine acetyltransferase # Organism: Bacillus halodurans # 12 183 1 170 229 197 56.0 1e-50 MSTETTALLRTLKRCKERAIEDLDAAMREDPAATSKLMVAIAYQGVHAIWAHRLAHAMWV KKPALRPLARLLSQLSRHITGIEIHPGATIGRRFFIDHGMGVVIGETAVVGDDVLMYHQV TLGGRARGQFKRHPTIGNRVLIGAGAKIIGNITVGDDCKIGANALVVKDVAPGTVVVGIP SKVHQGDVIA >gi|302034488|gb|GL383263.1| GENE 119 106733 - 107050 63 105 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4820 NR:ns ## KEGG: HMPREF0675_4820 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 42 105 1 64 64 125 100.0 5e-28 MRDDLGVNIRLTHPAGNELGVLRAEVDHQNDVVKLFHEGESMAHDPTWRHSRSPYRRGSL IDRVTRCRTMASNHLSPLAGGPRLDMVWFIHRQYSPAEPRLTYEH >gi|302034488|gb|GL383263.1| GENE 120 106940 - 108493 1259 517 aa, chain + ## HITS:1 COG:Rv3396c_2 KEGG:ns NR:ns ## COG: Rv3396c_2 COG0519 # Protein_GI_number: 15610532 # Func_class: F Nucleotide transport and metabolism # Function: GMP synthase, PP-ATPase domain/subunit # Organism: Mycobacterium tuberculosis H37Rv # 198 517 2 321 321 478 74.0 1e-134 MEQLHDVVLVVDFGAQYAQLIARRVREANVYSEIVPHNMPVRDMLAKEPAAIILSGGPAS VYAEGAPSVDPALFNAGVPVLGICYGFQAMAQALGGQVAHTGASEYGRTSLCITSAGQLL SRIPHTISVWMSHGDSVSRAPEGFSTLARTAGAPVAAFEDVERRLVGVQWHPEVHHTESG QTVLEHFLFDIAGCRPDWNASSIVGDQIAQIRGQVGDRRVICGLSGGVDSAVAAALVQRA VGDQLTCVFVDHGLLRQGEAEQVKNDFVAATGADLVVADESQRFLDALSGVTDPETKRKI IGREFIRTFEDVAKRLNADQPIDFLVQGTLYPDVVESGGGEGAANIKSHHNVGGLPDDLQ FSLVEPLRTLFKDEVRAVGLELGLPEDIVWRQPFPGPGLAIRIIGEVTAERLEVLRTADA ITREEMGAAGLDRKVWQCPVVLLSDVHSVGVQGDGRTYGSPIVLRPVTSEDAMTADWARI PYDVLEKISTRITNACPQINRVVLDITSKPPATIEWE >gi|302034488|gb|GL383263.1| GENE 121 108759 - 109043 360 94 aa, chain - ## HITS:1 COG:TM1156 KEGG:ns NR:ns ## COG: TM1156 COG1983 # Protein_GI_number: 15643913 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Putative stress-responsive transcriptional regulator # Organism: Thermotoga maritima # 1 57 3 59 129 57 43.0 6e-09 MTKLIRPSEGRIIGGVCQGIANSLNLDPTVVRVVAALLILMAGSGPLIYLVLWAIIPDEG SGSSMVTDLADRTRSPHKPEGTQGSSAPFDPYKD >gi|302034488|gb|GL383263.1| GENE 122 109276 - 109539 411 87 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4818 NR:ns ## KEGG: HMPREF0675_4818 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 87 1 87 87 111 100.0 8e-24 MGFIGWIVLGLIAGAIAKAIMPGKQGGGFLVTLLLGVIGAVLGGWLGSAIFHKPLGKFWS PWTWLISIVGALIVLWIWGIITKKKAQ >gi|302034488|gb|GL383263.1| GENE 123 109686 - 110948 914 420 aa, chain - ## HITS:1 COG:lin2646 KEGG:ns NR:ns ## COG: lin2646 COG1502 # Protein_GI_number: 16801708 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes # Organism: Listeria innocua # 62 415 119 480 482 202 33.0 1e-51 MTWAPRQRFTVRRALHWVAGGIVAAQMATMVGLVTFNGIKRRGRRPYRFPTAPTEPLKVS GHQVEIFAFGRDLYAAMIADIESAQHTVYLETFIWKNDEVGRHFRQALVEAAARGVKVYA MWDTFANLVVDPRFFRQLEGVQVRAQPLVTPSWIPTLRNLGRDHRKLLIVDSKVAYIGGY NIGSLYADRWRDTHARITGPAVGELESVFVDMWNQRPKGALIPRRNQPVLPTPGVRYWDT AFAVHRNSPRMAVYPIRNMYLEAIDRASERIWMTQGYLIPDDDVVAALHQAASRGVDVRI VIPAESNHVIADWLSRGYYDRLLHQGVRLFLYQGAMVHAKTCTIDGIWSTIGTANLDRLS LQGNYEVNVAITDSTVAQRMAEIFEIDMANCVELTLDEWQSRSHIAKLTEALLSPWRPFF >gi|302034488|gb|GL383263.1| GENE 124 111045 - 111698 795 217 aa, chain - ## HITS:1 COG:Cgl0617 KEGG:ns NR:ns ## COG: Cgl0617 COG2011 # Protein_GI_number: 19551867 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, permease component # Organism: Corynebacterium glutamicum # 5 217 13 225 225 179 58.0 5e-45 MNDYLRPIYLQSIWETLFMALITLVIGGICGLVLGILLYATRRGGLLANKIVHTILNVIV NIIRPIPFIIFMTAIAPLTLKVIGTTIGVRAATFPLCIAATFAISRIVEQNLVTVDPGVI EAARAMGAGPWRILFDVVAREALGPLILGYTYILIAIVDMTAIAGALGGGGLGQFAITYG YQRYNWAVTAVAVVTIIIVVQLAQFLGNWLARRALRR >gi|302034488|gb|GL383263.1| GENE 125 111698 - 112795 828 365 aa, chain - ## HITS:1 COG:Cgl0618 KEGG:ns NR:ns ## COG: Cgl0618 COG1135 # Protein_GI_number: 19551868 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, ATPase component # Organism: Corynebacterium glutamicum # 17 342 25 349 360 305 51.0 1e-82 MATDITPSSAPQCPDHIVFEHVTKEFRTRSGTVRALDDVSLAIKRGSISAVIGHSGAGKS TLVRLINGLETPTRGRVLVDGTDVSQLSDKAMRPLRADIGMIFQQFNLFGSRTIYDNVAY PLKLAHWKKADEKKRVTELLSFVGLTSKAWDHPDQLSGGQKQRVGIARALATKPSILLAD ESTSALDPETTADVLSLLKRVNAELGVTVVVITHEMEVVRSIAQQVSVLAAGHLVESGSA RQVFTHPQSETTQRFLATIIGQHPSGEEQARLQSENPDARLVDVSSVASHSFGDALARIS RTGASFQIVHGGVIEVHDGSLGNYTVALSGPAQAVEQAARILDEVSNSAAPTASATVPTP TEEAH >gi|302034488|gb|GL383263.1| GENE 126 112827 - 113789 1140 320 aa, chain - ## HITS:1 COG:Cgl0619 KEGG:ns NR:ns ## COG: Cgl0619 COG1464 # Protein_GI_number: 19551869 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Corynebacterium glutamicum # 41 314 14 295 299 186 38.0 5e-47 MSTPISSASTPEALPEKPGGRHTGLIIAAIIIVLAIIASIIFAVTKNTGQDSAADGKTTV KIGTTEAANDYWNVIKKKAAAESINIEVVSFNDYTQPNVALSQGQIDLNAFQHLLFLADY DVKNNDNITALAATYIVPLNIYSKKYQRLSQLPAGATIAIPNDATNQGRALLVLQEAGLL KLRGNGSALSTPADVITNQSKVKVKAIDAAQTAASLEGVDGAVVNNNFATDAGLDRNKVL YQDDAAGKSADPYLNIIAVKDADKDNPTYKKVAKLWSDPDVKNAIVKQSGGTAKIVSNHS KADLDKILSGLTTDIKKSNS >gi|302034488|gb|GL383263.1| GENE 127 114236 - 116668 1360 810 aa, chain + ## HITS:1 COG:MT0976 KEGG:ns NR:ns ## COG: MT0976 COG0210 # Protein_GI_number: 15840373 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Mycobacterium tuberculosis CDC1551 # 37 810 14 771 771 766 55.0 0 MTTPDLFSFFESAHERRSSVEPGVLPTYAPVTAGAASPADLLVDLNEPQREAVLHAGSPV LVVAGAGSGKTRVLTRRIAHLVGDRGVHPGSILAITFTNKAAAEMKARVVDLVGNRAKPM WVSTFHSAAVRILRTDIDRLGISRNFSIYDDTDAKRLITLVTRDQNLDPKKFQPRAIMNW ISHQKNELIAPDQAVAAAKSGNDRINGDVYVEYQRRLRAANALDFDDLIMCTVTVLRQFP EVREQYRRRFRHVLVDEYQDTNTAQYQFIRELCGDDPVELDDGARSVDPPELMVVGDSDQ SIYAFRGATIRNIIDFEKDFPGARTILLEQNYRSTQTILTAANNLIKVNLNRPAKNLWTD QGDGDKIVGYVADTEHDEAAWVARRIDELVDEGRTSYGQVAVFYRTNAQSRAFEDVFIRT GLPYRVVGGVRFYERKEVRDAVSYLRAIANPSDDVSLRRILNTPRRGIGARAEAAVEMFA TARRISFWEALKRIDEIDGLATRSVNQIRAFVSLMDDHIAMVGQGKRADEIANSILKESG YITELENSKDPQDETRLENLVELVSVAQEFVARVHAVDIDEAEQGNVEDLELSGDDSLPA FLEQIALVADSDQVPADSDGVVTLMTLHTAKGLEFDTVFITGFEDGVFPHMRSLADATEL SEERRLAYVGITRARKQLFVSRASVRTMWGQAQYNPPSRFIDEIPEHLIEWERIGQASVG WSTSASGRSQSARGALRDDTPAFGSGRGSASALKGRTLALSVGDKVLHSTFGLGTVKATS GQGDNAKADVDFGSAGLKRLALRFAPLEKL >gi|302034488|gb|GL383263.1| GENE 128 116895 - 118070 1214 391 aa, chain + ## HITS:1 COG:Cgl2512 KEGG:ns NR:ns ## COG: Cgl2512 COG0045 # Protein_GI_number: 19553762 # Func_class: C Energy production and conversion # Function: Succinyl-CoA synthetase, beta subunit # Organism: Corynebacterium glutamicum # 1 376 5 379 402 459 67.0 1e-129 MDLYEYQARDLFEKHGVPVLRGIVAETPEQASEAAAKLGTPVVAVKAQVKVGGRGKAGGV KIAKSPAEAAERAEAILGMDIKGHTVHKVMVAEGADIAEEYYFSILLDRGERRYLAMCSR EGGMDIETLAKERPEALAKVPVDPIDGVDDAKAREILSEAGFPDSEQDAIVPAVLKLWET YRDEDATLVEVNPMIKTGDGRILAIDGKMTVDNNASFRQPDHAGLVDRATTDPLELRAGE LGLNYVKLDGNVGVIGNGAGLVMSTLDCVAYAGENFPGSPAPANFLDIGGGASAEIMANG LDLIMSDEQVRSVFVNVFGGITACDQVALGIKGALEKLGDKAVKPLVVRLDGNAVAEGRK ILEEFNHPLVTMVSTMDEAASKAAELASKEA >gi|302034488|gb|GL383263.1| GENE 129 118074 - 118967 1037 297 aa, chain + ## HITS:1 COG:MT0979 KEGG:ns NR:ns ## COG: MT0979 COG0074 # Protein_GI_number: 15840376 # Func_class: C Energy production and conversion # Function: Succinyl-CoA synthetase, alpha subunit # Organism: Mycobacterium tuberculosis CDC1551 # 1 295 4 303 303 358 69.0 8e-99 MAIILDQNSKIIVQGMTGSEGMKHTQRMLDSGTAVVGGVNPRKAGTTVDFNGGTTVPVYG SVKQAVEATGANVSVIFVPAKFTKSAVMEAIEAEMPLVVCITEGVPVKDTAEFFTAAQRS GKTRIIGPNCPGIISPGKSNAGIVPADITGPGRVGLVSKSGTLTYQLMYEVRDLGISTAI GIGGDPIIGTTHIDALQAFQDDPETDIIVMIGEIGGDAEERAAKYISEHITKPVVAYVAG FTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAVGVRVGKTPTETARLAHEAMESLKK >gi|302034488|gb|GL383263.1| GENE 130 119195 - 120688 703 497 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4808 NR:ns ## KEGG: HMPREF0675_4808 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 497 1 497 497 798 100.0 0 MVRSGSTSTSARFVIESSKADESREPRVPWPWPVVVVVAAAAAILVQWLAFAGIIVPEWL ASNGRSFPSILAAASSLWLSGHGVPVDIIGVHIGLIPLGLTCVSLLLGEEACRYGARVLW HRHDKRPARRHVGEAVALHTTIELLAAVVMAAGATTPHWLAAMVGALLIGLCSGIVGACR GAHINPLSRLPHWARGLPKAVGATVAVCLAGGAAALAVALLVHADRVIHLHQQIGATGWG GFCLILLQLAWLPTMALWGTAWTMSPGFAFGTGTFVSPLGSHLGIVPALPVLGALPPNGP LNPAACVWLAVPVVAAIVGGILVMRSLPEAEFEIGCGLGALSGLLSGLVLGALGSLSSGN LGDGRLSEVGTIMPATGGCAVGVLTLVTMLCGFVIGLSRRLRSEESRQGRAERRQERKKN HAVKAEKKARNRAAKKKAKAEQKAAADKREAEAKQDKVAPENATAEPVDDEAIGHDIYDS IQHNQDAPDDGDTTDRP >gi|302034488|gb|GL383263.1| GENE 131 120974 - 121969 460 331 aa, chain + ## HITS:1 COG:MT1453_2 KEGG:ns NR:ns ## COG: MT1453_2 COG1985 # Protein_GI_number: 15840867 # Func_class: H Coenzyme transport and metabolism # Function: Pyrimidine reductase, riboflavin biosynthesis # Organism: Mycobacterium tuberculosis CDC1551 # 137 324 8 196 203 150 47.0 3e-36 MDQRWDDAMALALDMAAKSPCPDPNPRVGCVIVAEDRVIGQGWHRGAGTPHAEVEALRQA GDDARGATAVVTLEPCHHTGRTGPCSHALVDAGIARVVIAQSDPNPVASGGEQWLRTHGV EVVTGVLSEEATALNADWTFSQIHRRPRVCWKYAASLDGRSAAPDGTSQWITGEQARHQV QLGRARCGAIIVGTGTALADNPRLTVRLPGVTHQPLRVVVGMREPPAGCHLRDDSASTLH IPSHDPAEVLDLLWCRGVHRVWLEGGPQLAGAFLAANLVDEVIAHMAPTVLGGGRAAVVD PTVATLSQAHHFVIDDVTQLGPDIQIHAHHE >gi|302034488|gb|GL383263.1| GENE 132 121962 - 122576 458 204 aa, chain + ## HITS:1 COG:MT1456 KEGG:ns NR:ns ## COG: MT1456 COG0307 # Protein_GI_number: 15840870 # Func_class: H Coenzyme transport and metabolism # Function: Riboflavin synthase alpha chain # Organism: Mycobacterium tuberculosis CDC1551 # 6 197 1 196 201 214 60.0 6e-56 MSEDTMFTGIIEEIGEVLAIEKGRDSARLAIRGPLVCSDARLGSSIAVNGTCLTVTDLDE ASFGCDVMAETLNRTALGGLAPGSRVNLERPVPVGDRLGGHIVQGHVDGLAKLVFRTPGD HWEVFRFALPAAVSRYVVEKGSIAINGTSLTVCAVAPEWFEVSLIPATLTGTVLGALSPG DEVNVEVDIIAKYLEALTNKERSC >gi|302034488|gb|GL383263.1| GENE 133 122570 - 123886 923 438 aa, chain + ## HITS:1 COG:Rv1415_1 KEGG:ns NR:ns ## COG: Rv1415_1 COG0108 # Protein_GI_number: 15608553 # Func_class: H Coenzyme transport and metabolism # Function: 3,4-dihydroxy-2-butanone 4-phosphate synthase # Organism: Mycobacterium tuberculosis H37Rv # 2 201 4 205 205 194 53.0 2e-49 MLNTIEEVLAELRAGRPVLVTDDADRENEGDAILAAELADPRWVGWMVRHTSGYLCAPMT EERADQLDLPLMWPASQDPLRTRYTVAVDAAHGITTGIDAVQRARTARVLADPSSTPSDL VRPGHVLPLRARAGGVLERRGHTEAAVDLARLAGLEPVGLIGELVGDDGMCLRADAIADL ARTEGLALTTIDQLAQWRQAHDPGPAVPTQRVTALASAHLPTRHGQFAITGYRDNCTGVE HVLLVGEKGIDADDGGPAWVRVHSECLTGDALGSLRCDCGDQLAAAQQHVCRHGGAIILL RDHEGRATGLLNKIAAYKAQDGGLDTVDAQTHLGLPVDAREYGAAVAILANIGITSVRLL TNNPAKAEALRDGGLEVTMSPLETSTRPEDERYLRTKRDRMGHALTLGVSPSEMSTQPLA SSHTTSTTPALTIKGDRP >gi|302034488|gb|GL383263.1| GENE 134 123883 - 124383 417 166 aa, chain + ## HITS:1 COG:Rv1416 KEGG:ns NR:ns ## COG: Rv1416 COG0054 # Protein_GI_number: 15608554 # Func_class: H Coenzyme transport and metabolism # Function: Riboflavin synthase beta-chain # Organism: Mycobacterium tuberculosis H37Rv # 12 143 2 133 154 140 56.0 2e-33 MSSRTTLGLSAPDLSGLDGSGLKVAVVAAQWHGTVMTGLLDGALRGLVDSGVHDPAVIRV PGSFELPVACASLADHFDALVALGVIIRGGTPHFDYVCDAATRGITDVAVRTKTPIGFGI LTCDDEAQALDRAGLEGSHEDKGYEAAQAAIATLTALSTALASGPS >gi|302034488|gb|GL383263.1| GENE 135 124408 - 125031 526 207 aa, chain + ## HITS:1 COG:Cgl0837 KEGG:ns NR:ns ## COG: Cgl0837 COG0299 # Protein_GI_number: 19552087 # Func_class: F Nucleotide transport and metabolism # Function: Folate-dependent phosphoribosylglycinamide formyltransferase PurN # Organism: Corynebacterium glutamicum # 5 197 9 193 197 181 56.0 1e-45 MAFRVVVLVSGTGTLLQSLIDNLPEQVSIVAVGSDQPDAVALQRAQAVGIPTFAEPLPRS DAQTTMRAAWDTRLTDAVARFDPDLVVCAGFMKLLGQTFLDRFGGRTINSHPALLPSFPG IHGPRDALEYGVKITGATVFMVDAGVDTGRILAQRAVPVLTDDTVESLHERIKVKEREML VTVVTELAGVRPGMEELGTESSRKDPQ >gi|302034488|gb|GL383263.1| GENE 136 125028 - 126578 1295 516 aa, chain + ## HITS:1 COG:Cgl0838 KEGG:ns NR:ns ## COG: Cgl0838 COG0138 # Protein_GI_number: 19552088 # Func_class: F Nucleotide transport and metabolism # Function: AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) # Organism: Corynebacterium glutamicum # 3 516 4 520 520 635 65.0 0 MSERQPIRRALVSVYDKSGLDQLAKALIDAQVEVVSTGSTAKELASHGVTVTEVSEITGF PECLDGRVKTLHPKVHAGILADRRLTSHREQLTALEVKPFDLVVCNLYPFAETVAQGGDF DECIEKIDIGGPSMVRAAAKNHANVAVLTNPDQYEDLARALSEGGYTMEERRVLAARAFA HTAAYDVAVATWFGSRDGVAVDGVPTFVGTTGELSHPLRYGENSHQAAAVYRSSGEPGLA GARQLHGKAMSYNNYVDTNSARRAAFDFEAPCVAVIKHSNPCGIATGSDIAEAHRKAHAC DSLSAFGGVIATNRPVSVEMAEQVAEIFTEVVVAPGYEDGAVEILSRKKNIRLLECPAPH LAGWELRQIDGGLLAMETDLFQADGDDPANWTLAAGDPVDDVTLADLSFAWRACRSVRSN AILLAHDGASVGVGMGQVNRVDSCRLAVERAGDRAAGSVAASDAFFPFADGPQVLIDAHI AAIVEPGGSIRDDQTIEVCRTAGVPLYFTGTRHFFH >gi|302034488|gb|GL383263.1| GENE 137 126656 - 127282 345 208 aa, chain - ## HITS:1 COG:no KEGG:PPA1746 NR:ns ## KEGG: PPA1746 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 18 208 18 208 208 344 100.0 1e-93 MSRRTTPRRGRRTSIRRVSCQVAVLGLCTATGLLAGCSFSDHTTPAPSDSRPPAQQLASQ PLPSWIPSPTTGRKATGSVQRPALSYQGVEVRVDLDRGNSVTMNVHGPTAPAGTKVGAEA ADLTWTVTVSDATGTIPLSITQFNVQDEAGKYHWAQPVKGSPVPAKISKGQKVTFTIHTV ASAGEGMVRWAPDGKHVVALWDYIAELD >gi|302034488|gb|GL383263.1| GENE 138 127294 - 129720 1868 808 aa, chain - ## HITS:1 COG:no KEGG:PPA1745 NR:ns ## KEGG: PPA1745 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 808 44 851 851 1462 99.0 0 MHIHRRFTKAVGAAVAAGLLAFGLSTPAPGLALPAEGVPVKAGNAPAHTTITTTNPATGK IKHVWLIILENKSYDENFTGLNQNSYLWKELPRQGALLNHYYGTGHYSQDNYITLVSGQA PQMDLQEDCGDVNSNFGSNSSIIRTHTGKEFGRNDNYGQAMSLAGPNAPAGKNGCTYPKD IPTLFNQFDAAGVTWKGYAQDLRNHPGREDGLAGSPGTLANTPDKNPKVMKTNAQDEARG ITSYTGAQADDQYVAKHFPFVWFHSIIGNDGTGKDALTHPIDGGTPSDTKHIVNLDDHSR GLVSDLSRPADQVPAFNWITPNNCSDAHDATCKGNNLSGLFDAHGSPDYSKPLTTPPKNH TGGLYAADLWLRYYIPLIEKSAAFKDGGLIDVTFDEANPPFANLSFNNATDNTDVAKAAR RHELYNYSPQTVKDLAPGYQKYAPGTFPGATTTARNYLKADLAGQNINGRNVDWEPTGPN STLATDKHGNQLFPGPGGNGFITRPPSCEQDTKLVNADKSNCVHGAKNTGASWGYSQAST LKASATAGSSTVQADVTFADIGRRVTGNGIPEGAHVGNVTNLGPNMVASASDPVTKGMFT LVDKNDNPLTTTGVVSSVKLSATGVPGHLAEGETPASTFDAHDATPGGGITGSILISPYI KPGTVSSTHYNHFSWLRTMEDIFSVSKGKDTRQLEAGTVSGGLDGAGHLGFAAQAGLGTF GKDVFTNVSTGDEPHPSASTTAGAPSSHPSLAPSRGPATHPSRSGKPSLPRTGAEGTVDP VSDSHASMETGLAVIGAALDTRTWHRHH >gi|302034488|gb|GL383263.1| GENE 139 129920 - 130915 360 331 aa, chain + ## HITS:1 COG:no KEGG:PPA1744 NR:ns ## KEGG: PPA1744 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 11 331 1 321 321 608 100.0 1e-172 MCGDGVTVTTMTALGRQALAVTARWLRDGLCSGKRGRSNSLVVPWFSCQTMITPWQLEGY RVHRLPVGHNFQLDADALANALAACRRQGEHPAVLTCETFGIQPSSKLIEVLKQARRDGV PVIVDRTHSFLAPSRTPADIEVVSTRKLLPLTEVAWVQADEDLSELVGTRDNKDVFLTSA RRRFLKDRGLDTFEEAENLADDCWVPVPPDDDARAEFEGFNLAEFSRRVDQTRAALLSGL EVAQIVNPSARCAMVLSHPAADELADRLRNVGVVGPLHWDRPQHLDVDWPDDLVSLPPVM NETTIDRVIDVATMVVEGARFSWKDRDLLRP >gi|302034488|gb|GL383263.1| GENE 140 130930 - 131793 711 287 aa, chain + ## HITS:1 COG:Cgl0629 KEGG:ns NR:ns ## COG: Cgl0629 COG0190 # Protein_GI_number: 19551879 # Func_class: H Coenzyme transport and metabolism # Function: 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase # Organism: Corynebacterium glutamicum # 1 284 1 283 284 357 64.0 1e-98 MTAQKLDGKATAAAIKSELAERVAALRDQGVVPGLGTVLVGEDPASHQYVAGKHRDCAQV GIESIRVDLPADVTEEELAQKIRGLNANPHCTGYIVQLPLPRHIDTNWALNLIDPNKDAD GLTPASLGRLVLNEPAPLPCTPRGIVELLTRHGIELPGANVCVVGRGTTVGRPLGLLLTR RSENCTVTLCHTGTRNLAEHTRQADIIIGAAGSPGLINADMIREGAVLVDVGVSRTPEGK IQGDFTADVWEKAAWVSPNPGGVGPMTRAMLLSNVVDRAERLTADPS >gi|302034488|gb|GL383263.1| GENE 141 131790 - 132128 162 112 aa, chain + ## HITS:1 COG:no KEGG:PPA1742 NR:ns ## KEGG: PPA1742 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 112 1 112 112 177 100.0 1e-43 MRQPRHAAEAPVSTATRHARRSERCAESKEHLQSWWALTVCLLGVAASAIVMGTGHWRRG AMVFAASVLMAGILRVVLPEQSAGLLAVRTRWIDSVLLLGLGAVMVVVILTR >gi|302034488|gb|GL383263.1| GENE 142 132203 - 133546 838 447 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148544941|ref|YP_001272311.1| 50S ribosomal protein L29P [Lactobacillus reuteri DSM 20016] # 15 441 38 464 477 327 42 2e-88 MTTTAVPPTSTQLCGVFADVNAAVAAAREAFLAFSDCSLAQRRTFINAVREAASQQERLE YMATAAVEETGMGNAHHKVLKNLYAATRTPGVEDLVMEARQGDDGLTTLEYSPYGVIGAI TPTTNPTETIICNTVGMLAAGNTVVFSPHPRARHLSAWLVDVLNRAMVEAGAPDNLITVI TEPTPDTTKALINHPDITMLVATGGPQIVNMVLSSGKKAIGAGSGNPPAVVDETADVAKA ASDIVQGASFDNNLPCTAEKEVIVVAEVLPQLMTAMTANGAQVVSDPEELAKLRSLLLDT SGTRPNTAWVGQDAQKILRTAGIEPHQDTRLVTMVTDPSDPFVQVEMLMPVVPVVPVTDY LTAIDLAVELEHGNRHTAIMHSKDVSRLDLMARRIQTTIFVKNGPSFAGIGINGEGFATF TIAGPTGEGLTSARSFARRRRCVLDAH >gi|302034488|gb|GL383263.1| GENE 143 133521 - 133712 61 63 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|328752408|gb|EGF66024.1| ## NR: gi|328752408|gb|EGF66024.1| hypothetical protein HMPREF9579_02409 [Propionibacterium acnes HL087PA1] # 7 63 1 57 57 86 98.0 6e-16 MGGTAVVVMAAGSFGCGVLGEIRLLAVDIRTSDASTIEMVVVARLEQQLERVRGAVKACL CVH >gi|302034488|gb|GL383263.1| GENE 144 133974 - 134957 1074 327 aa, chain - ## HITS:1 COG:ML1091 KEGG:ns NR:ns ## COG: ML1091 COG0039 # Protein_GI_number: 15827536 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Mycobacterium leprae # 1 327 1 329 329 447 75.0 1e-125 MTQTPVKIAVTGAAGQICYSLLFRIASGSLLGDTPIELRLLEITPALKALEGVVMELDDC AFGNLVNIEIGDDPKKVFDGVNAAFLVGAMPRKAGMERSDLLTKNGAIFTAQGKALNDVA ADDVRVLVTGNPANTNALIAATNAVDIPNNHFAALTRLDHNRAKTQLARKTGKTVNDVRH MTIWGNHSSTQYPDVFHAEVAGQKATNLVNEAWIENEFIPTVAKRGAAIIDARGASSAAS AANATVECMRDWMGSTPEGDWVSMAIPSDGSYGVPEGLISSFPVTITNGKVEIVQGLDID DFSRAKIDASAKELADERDAVKELGLI >gi|302034488|gb|GL383263.1| GENE 145 135136 - 135987 530 283 aa, chain - ## HITS:1 COG:RSc1873 KEGG:ns NR:ns ## COG: RSc1873 COG0788 # Protein_GI_number: 17546592 # Func_class: F Nucleotide transport and metabolism # Function: Formyltetrahydrofolate hydrolase # Organism: Ralstonia solanacearum # 7 283 6 288 288 246 46.0 4e-65 MSESHELVVTWTSPDRPGLVHAVTGACAQVGGNLTECQQFTSTDTGNFFIRLQVESASSR ADLESAVSELAGKCNATVHVDELGRPVRTLILASKASHCLSHLLFNRDAGRLPIDVVQVM ANHPDLADLTAFHKVPFRWQKVDRESKTSFEQEVLRTVGDLDVELVVLARYMQILSPELC EQLSGRCINIHHSFLPGFKGANPYRQAHSRGVKLIGATAHFVTVDLDEGPIIEQRVQRVN HSQTVAQLTAVGQDTESATLNEAVRLFAEHRTFLDGMRTVILQ >gi|302034488|gb|GL383263.1| GENE 146 136183 - 138387 1981 734 aa, chain + ## HITS:1 COG:XF2700 KEGG:ns NR:ns ## COG: XF2700 COG2838 # Protein_GI_number: 15839289 # Func_class: C Energy production and conversion # Function: Monomeric isocitrate dehydrogenase # Organism: Xylella fastidiosa 9a5c # 2 728 22 752 760 849 58.0 0 MPTIVWTKIDEAPALASYSLLPIVEGFLDGSGIDITTSDISLAGRILAQFPDRLNEDQKV ADHLAELGELTGSPDANIIKLPNISASVPQLKAAIAELQSQGYELPDFPDKPSTDEEREI AARYATVLGSAVNPVLRQGNSDRRAPTAVKAYAKAHPHRMGQWTDQVKARVAHMDHGDFF DHEESFVSRGQDLDVVLIGTDGSETTLASGIKTLDGEIVDATFMSVDALDEFYASSLAQA NEEDLLWSVHLKATMMKVSDPVLFGHAVRTFLVDVFDKYGDDLNSVGVNPDLGLGDLYTR LEKLPAERATAIKAAIDSAFAARPALAMVDSDNGITNLHAGNLVIIDASMPTVVRDSGCM WNAEGKRQETLACIPDRSYATMYAAIMDDCREHGALDPATMGDVPNVGLMAQKAEEYGSH PTTFIVPHDGRVEVRCGDEVLTNQQVEAGDVWRMSRVRDIPVRDWVRLAIERARITNTPA VFWLDKNRAHDARVIEKVKAYLPEHEGLDIRILAPADAMKFTLARIRRGEDTISVTGNVL RDYLTDVFPILEIGTSAKMLSVVPLLAGGGLFETGAGGSAPKHVAQFVAEDYLRWDSLGE FCALGACLEHIDQTSEGTKAGILAATLDKAIGAFLENDRSPARKLGQSDNRGSHYWLARY WASELAAQHDDAELADRFSDVATELAAREDQILKELNGVQGSPVDMGGYYHPDEELVAEA MRPSTTFNAIIESL >gi|302034488|gb|GL383263.1| GENE 147 138597 - 139532 633 311 aa, chain + ## HITS:1 COG:no KEGG:PPA1737 NR:ns ## KEGG: PPA1737 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 311 72 382 382 548 100.0 1e-154 MFGHTDPWISDLAFLPGLPALGRVIILVTGMSPYLAILIAAQMGFLTAAAVITAVGHRVA GPTAAVLLVACWGAAPRAVVESMGYTEGWFIALVGLGLLAILSGRWILAGVFVGVAGLFR ASVAPVCIVLGIAWLTSLCTKAEAGQRWRRFVGMALSPLGLLTWFVIVAHRTGRWNGYLL VQKAWGSEMGTLLDTWEDLHSRMDHVPFDWRYTGLVALTWCMYLALGIVMAVRREQVWLT GYVLVTVIFVGHMQGYFNSKARFLLPAFPAFLPVARLLDRSPRWFQAVFVLVISAVSTWW SLDILGHNLSP >gi|302034488|gb|GL383263.1| GENE 148 139660 - 141066 1001 468 aa, chain + ## HITS:1 COG:sll0260 KEGG:ns NR:ns ## COG: sll0260 COG1253 # Protein_GI_number: 16331101 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Synechocystis # 10 396 12 405 448 224 34.0 3e-58 MAEVFENAALILLFILVGGVFSAAEMALVSLRDSQIKQLAATRGSRGRSIQKLQSNPNRF LSAVQIGVTLSGFLASAFGGATLASELAPVFESWGMSASVAATVALVTITVIISYFSIVL GELVAKRLAMQRAEGFSVALGPMVNGIATLFRPIIWFLGVSTDLVVKILGGDPTAAREEV TDEEIRSMVVSSATLGDEERTILDEVFAVGEKSLREVMVPRTEVDFLQGSMKAVQAAQVV RDGSHSRYPVIDGSADRVLGFVHVRDLLELNPQIRTSRVSQLVRAVVSLPDTVKALKALT EMRRTNAHLAIVLDEYGGTAGIVTLEDLVEEIVGDITDEYDTVEPSDLAHVRQRDIDGLT TLEEFSDKVGLVLPEGPYDTLAGYFMAQTGEVPTKGAQVDVHLDPVGYVPDENDEDVEPD PNIELTVTEVDGLRAAWLRIRRLDAPGASTVPAGTSTIPRPEREAASA >gi|302034488|gb|GL383263.1| GENE 149 141063 - 142304 694 413 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4789 NR:ns ## KEGG: HMPREF0675_4789 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 413 1 413 413 810 100.0 0 MRRRPAWLGGPGKDADGAVLLTGPEAGELLKAAVGHAGGGLVDWHLDHVDANPGQSTTAT YQARVQWPAGEREELFGMSARASGPAVTDSRADIYVDGSREVAVWRYPDDPDLPGLSRAA YPEQMAAIISDLNLVGARVSAQQINLHMIGYRPRRRAVLCAEVNNRRFYVKVLRDGIFQA TLARHDLLTRASVPSPRVAGVTEDNLLFLTELPGCPLSKALFEPGSPCTAESLVSLLDQL PPQVCDLPRRSPWSESVAHYCRMVAAALPDQSERLERMAQIITEGLSDVPAGNEPTHGDF HEGQIHVWNGHVCGILDVDTVGPGRRADDLACLVAHLSTVQRMNVPQADRMRQILTAWVP VFDSRVDPIELRLRSAAVAISLATGPYRSQEDNWQAETLSIVDAAEALVNQVA >gi|302034488|gb|GL383263.1| GENE 150 142512 - 143630 1141 372 aa, chain + ## HITS:1 COG:CAC0702 KEGG:ns NR:ns ## COG: CAC0702 COG1744 # Protein_GI_number: 15893990 # Func_class: R General function prediction only # Function: Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein # Organism: Clostridium acetobutylicum # 47 365 35 341 357 139 31.0 7e-33 MKNFPLAIPAVFAAAALSLSACAQAPDASTGSSAGSSTSAAGKDNSNSGEFKACMVSDSA GFNDKSFNETSLQGLNKAASDLGVKTAKVESKDDKDYATNLQSMVDAKCSIIVSVGFLLE KPTLAAAKANPNVKFAIVDDNPANPPENLKPLIFNTAQSSFEAGYLASALTKTGKVATFG GMKIPTVTIFMDGFSQGVDYYNKQKHKSVQAIGWDVKKQDGQFVPQPNPFQNVSGGKATA QALLNQGADIILPVAGNAGNGALQAVKSSGGKANAIWVDGDGCKTQPAYCSNIITSVFKG MDVAVFDAVKAAKDGKFDNKPYVGSLEDGGTGLSPFHEFDSKIPADVKNELKAIKDDINS GKITITSKAQPK >gi|302034488|gb|GL383263.1| GENE 151 143828 - 145417 1382 529 aa, chain + ## HITS:1 COG:L165279 KEGG:ns NR:ns ## COG: L165279 COG3845 # Protein_GI_number: 15673310 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport systems, ATPase components # Organism: Lactococcus lactis # 25 515 12 506 506 477 52.0 1e-134 MTTNTTVAPPGDNAPLKDGLSLRGVTKRFGTLTANDHIDLDIVPGRIHCLLGENGAGKST LMNILYGLLPSDEGQVYIDGVEQHFDNSKQAMAAGIGMVHQHFMLVNVFTVAENIALGRE ESTAGILSMRRARAKVRELSDRYHFDVNPDSVIENLPVGVQQRVEILKSLANDAQYLIFD EPTAVLTPQEIDELMAVMKTLRDEGRAIVFITHKLREVRAIADDITVVRRGRIVGKASAD QSEAELAEMMVGRAVKLVVDKDEAKPTGSRLDIKDLTVADDRGSVVVDGVSLSVAGGEIL GVAGVQGNGQTELASSLLGLIKPTSGTIRIDGKDTTGAAPAKVIEAGLGFVPEDRQRDGF VGEFSIAENLVLNQVGAYSKHGNLQLRRIADNARDRVEEFDIRTPSASLPVSSLSGGNQQ KVVLARELSRSLSVLVASQPTRGVDVGAIEFLHKRVVEERDNGTAVLIVSTELDEIEALS DRIAVMYRGRIVGIAPAGTPRDVLGLMMAGFSYDEACDSVAKGHKEVSE >gi|302034488|gb|GL383263.1| GENE 152 145414 - 146685 1368 423 aa, chain + ## HITS:1 COG:lin1427 KEGG:ns NR:ns ## COG: lin1427 COG4603 # Protein_GI_number: 16800495 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Listeria innocua # 86 390 35 337 350 178 39.0 2e-44 MSTESLKPAASKEATSPTAATASQTEATSHRSFPWNDLWVTVAAFVLAFIVSAIVMVAAD PAINKEWSYLFSRPDALSDSWAQISSAYAALFQGAFGSWQALTATTAQSAPLICGGLAIG LGFKAGLFNIGGQGQAIAGATLAAWVGFNFHSLPLPVHLLFAVIAGFIGGAIWGGIAGIL KARAGANEVIVTIMLNYIAGGLLAWLLTTKAFQMPGRTDPIAPIVDWNATFPRMAGSQLH LGFFLALLLAVGTWWLLDRTPLGFQIRAVGSNPNASATAGMNTNSIIAWTMIISGGLAGM AGVEVALGPISGATPTQLSIGLVGTIGFDAITVALLGRSKPLGIVLAGLFWGAMNQGGLR MQAMTQTSLDLVRVIQAVIVMFVAAPMLVKTILPFLKTRREKRTKKRDRGPVPADTTTKG ALA >gi|302034488|gb|GL383263.1| GENE 153 146682 - 148040 1139 452 aa, chain + ## HITS:1 COG:alr5368 KEGG:ns NR:ns ## COG: alr5368 COG1079 # Protein_GI_number: 17232860 # Func_class: R General function prediction only # Function: Uncharacterized ABC-type transport system, permease component # Organism: Nostoc sp. PCC 7120 # 154 452 11 307 312 199 38.0 1e-50 MSPTSRFPRPTTSDITKIGIELPAEASEALDRELEFEQVESREARTHRLSTGVLIGIMAL VLFILVTKTSGEAHFAFTDALAGKELGTMSVSGFPVVLVSAIACLLAAGAFFMGRSRHTL TVTAGVVAGIAIIVGFLSWAAAGRGLPFQVAGQLQGTLSVATPLVLGALCGVMCERAGVV NVAIEGEMLTAAFAAALVGSITKSIFAAIVVGIVASVLTAALLAVFTIKYFVDQVVMGVV VNLFASGLTGFFYTQLLSPNAEEYNTAPIMEAVAIPGLSKIPFFGPIFFDQTVLVYIGFL CIPLVWFLLWRTKWGLRVRSVGEHPEAADTVGISVAGVRWSAVLVGGVFAGLGGAYFTIG TVGSFSKDITVGNGFIALAALIMGRWRPGLAAVMALFFSFVTQLSTELSTISAPMPSQFL LILPYIATIVAVAGLVGKVRAPASDGTPYIKE >gi|302034488|gb|GL383263.1| GENE 154 148015 - 148455 192 146 aa, chain + ## HITS:1 COG:ML2174 KEGG:ns NR:ns ## COG: ML2174 COG0295 # Protein_GI_number: 15828164 # Func_class: F Nucleotide transport and metabolism # Function: Cytidine deaminase # Organism: Mycobacterium leprae # 11 131 3 123 134 157 60.0 5e-39 MAPLTSRSDVDVDWDALRCRAHELTKRAYVPYSHFPVGAAGLAEDGRVVVGCNVENAGYG VTLCAECGLISDLVAGGGGHLLAFCCVDAMGETIMPCGRCRQLLWEHGGPTMLIDTPAGV QTMTEVLPQAFGVDNLDRVANQQEKS >gi|302034488|gb|GL383263.1| GENE 155 148452 - 149354 549 300 aa, chain + ## HITS:1 COG:ECs0210 KEGG:ns NR:ns ## COG: ECs0210 COG0328 # Protein_GI_number: 15829464 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HI # Organism: Escherichia coli O157:H7 # 7 136 10 141 155 102 43.0 1e-21 MIVAAADGSSLNNPGPAGWAWYIDDDTWAAGGWPRGTNNMGELKAVLDVLRATRDADEPL TILCDSQYAINCCTKWIPGWKRKGWRKRDGKPVLNRDLLEPIDEELDGRDVTFEWVKGHA GHAMNEAADQRARAAATAFRDGTPVDHGPGFGRVDRDPQPQEDVPRPGNGDEQERLFDLP ERPATPDQELIGILTDKERRFLETDAIAHRSALEELAAPDFIEHDGNGRLWTRGRALADM PVPEVRASIEILGMVRIGPQDVLLRWRARAGSRVSVRVSLWHRDPDRGWQLRFHQITPVR >gi|302034488|gb|GL383263.1| GENE 156 149464 - 151242 1462 592 aa, chain + ## HITS:1 COG:Cgl0868 KEGG:ns NR:ns ## COG: Cgl0868 COG0143 # Protein_GI_number: 19552118 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA synthetase # Organism: Corynebacterium glutamicum # 1 589 1 608 610 803 63.0 0 MCANVLAAVAWPYANGPRHIGHVSGFGVPSDVFARYMRMSGHRVLMVSGSDCHGTAISVK ADQEGVTAQECAEKYHRIIAAGLQGLGLSYDLYTSTLTDNHADVTQEIFTRLHENGYVVK RSEMGAFEPSTGRTLPDRYIEGTCPVCGYDDARGDQCDNCGRQLDPADLIDPRSKTTGAA PEFRETEHFFLDLPALAESLASWIDTRTDWRPNVLKFSHNLLEELRPRAITRDLDWGIRV PVEGWQDNPMKSIYVWFDAVIGYLSASIEWARRIGRPDAWREFWNDEDARSYYFMGKDNI VFHSVIWPGILLGTNGRGDKGGEPSEELGTLNLPTEIVSSEFLTMSGSKVSNSRGATIFV GDFLHEFGPDALRYFIAVAGPENQDTDFTWEEFVRRVNFELANEWGNLVNRSISMAFKNC HEIPAAGELTDADRELLDAAATGFDTVGGLLAHARFKAAITEAMRIVGLANAYISAEEPW KLKDNPERRDTVLHVALQVVSDVNTMMTPFMPHSAQKIYEALGGEGVWAAQPELIETDGA PILMGDYATEQASWGRHEIAVGTPLSKPSPIFRKLDAKLAQTGPQWAPVNPQ >gi|302034488|gb|GL383263.1| GENE 157 151244 - 151876 426 210 aa, chain - ## HITS:1 COG:SA1710 KEGG:ns NR:ns ## COG: SA1710 COG0847 # Protein_GI_number: 15927468 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, epsilon subunit and related 3'-5' exonucleases # Organism: Staphylococcus aureus N315 # 40 203 3 162 184 98 38.0 7e-21 MALQKWPNRGASNATPADFMSTRRTQRRSFFVPSPSQIAEPSFVAVDFETANRMGGVSAC QVAMVKVLDGQIVDRLNTLIRPPKGWDSFEFTYLHGISAADVADAPGWINIADTVSHFVD GATVYAHNAAFDSRVWRQLDEHFGTTTLPAPFFCSYRTAQRLIPGLPNYKLPTVLHACAP NYQLNHHRADSDAEACALIVCELQRRAQTS >gi|302034488|gb|GL383263.1| GENE 158 152166 - 153818 1157 550 aa, chain - ## HITS:1 COG:MA2503 KEGG:ns NR:ns ## COG: MA2503 COG0477 # Protein_GI_number: 20091334 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Methanosarcina acetivorans str.C2A # 17 480 3 466 533 186 29.0 1e-46 MSDASSAATAAQPFPGRWKALAILAAGLSLIILDGTIVGVALPTMISALNLNLTDAQWVN AIYNVIFAALLLGAGRLGDRIGRRTTFATGVVLFVGGSLLAATASGPGSLIASRTVQGVG GALVLPSTLSSVNSLFQGKDRAAAFGIWGAVMSGMAALGPLLGGVLTEYASWRWIFWVNL PLGLLVLAGIAAWVPQTRGKPADKGVDVDGVLTSAIGFGLLIFGLIEATTLGWWDKKETF KIFGWEWPASWSMSPVPWAIAIGLVFIMLFIAWEHHRAKVGRDALLDLTLFRVGTFSWGN LTAATVAIGEFSLTFVLPLFLVNSLGLSTVRTGIVLAAMALGAFFSGASARHLAARMGAT GVVVLGLALEVIGVGLLAWVVGMQGSTWLSVLTLIVYGVGLGLASAQLTSTVLHDIPADQ SGAGSATQSTVRQLGSALGAAIAGTALGSAMNHTIPDAVASISAVPTRVLDKLVHTTEDS AGSAIPGLRNASPNSPFLRPLGESRGAVISSLETGFAHAAAWSIGLSSLFLVIGLLGAIM VRYEARRQVG >gi|302034488|gb|GL383263.1| GENE 159 153899 - 154549 336 216 aa, chain - ## HITS:1 COG:no KEGG:PPA1725 NR:ns ## KEGG: PPA1725 # Name: not_defined # Def: putative uridine kinase (EC:2.7.1.48) # Organism: P.acnes # Pathway: Pyrimidine metabolism [PATH:pac00240]; Metabolic pathways [PATH:pac01100] # 4 216 5 217 217 382 93.0 1e-105 MPRFFARAESAYVPDTFPIDSAAVARTIILLAGPSGSGKSRLTHMADLPELRLDDFYRDH DEPGLPMVRDMVDWDDVSSWNLPVAVEALGELATTGHTVVPCYDISRSRADGNHVVEVGD ARAVVAEGIFAPDLLEPCLQAGLNVLPIWLDRPRWLNFARRLVRDLRQHRKSPPVLIRRG LTLCQAEPALRSRAIVMGFQPMSMRRASTTVAALMG >gi|302034488|gb|GL383263.1| GENE 160 154735 - 156408 1338 557 aa, chain + ## HITS:1 COG:ML2546 KEGG:ns NR:ns ## COG: ML2546 COG0318 # Protein_GI_number: 15828369 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Mycobacterium leprae # 24 534 58 536 548 194 31.0 5e-49 MGFDSQPLRAYVEHNFTYVAGLERNLHRFGDSPAMIDPVADRSWTYRELAADVERFAVVL SQHGVGPGDTFAFELFNTSQFAICYLAAHRLGAVGTVLNCRLAPGELACALRDARPKVLV YDAEVTSRVLPALEEVAPERETPTPSLIQVAPAGTSPDLPDGAVDFDTALSQADGRAPDR PSNLSTYDEVIRLYTSGTTGLPKGVPLPSFVEVMSAHDVIMHFPLTPQDRTLNMTPWFHR GGLHSGGPNPTFYVGGSVVPMREFDADTVLDWVGRYQITFLIGAPTALERLARAQEKNAR DLSGLKGIVTMGSPLDAGSARRYMEVLTPNISNGYGTTETFWNTFLRPFDLPGMAGTAGR ASTDDDVEVVKVFDDRIAEPDELAAKDGVEVGEVAMRSPKCGMSYSGETGSKDPKFHAGW FYPGDLATWDEHEFVTIVGRKDEMIISGGENVFPTQVESVLESHPSVLESIVVGLPDPEW GQLVVAYVVADPDAAAVTADELEAHCLASEDLARFKRPRAYRFVDKLPMTPTGKKKHVEA TAMACREADTFVRPRHY >gi|302034488|gb|GL383263.1| GENE 161 156440 - 158116 1338 558 aa, chain - ## HITS:1 COG:PM1074 KEGG:ns NR:ns ## COG: PM1074 COG1109 # Protein_GI_number: 15602939 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Pasteurella multocida # 18 536 8 531 551 426 46.0 1e-119 MTTTRPERLSPELVAEVQSWLDQDPDEATRTELSDLLVRAQSGEAEAIAAVKSAFAGPLT FGTAGLRAALGPGPSRMNRVVVQRAAAGFASWLRSHSSRGGTVVIGFDARHNSDVFARDT AEIMAGAGFHALLADSPIPTPVTAFAIKHYGAVAGIMVTASHNPPADNGYKVYLGDGSQI VPPTDAEIAHEIEVVSEEPVGAIARGDDIEFIGDELIDAYVCRAAKLTTANPDVTWVYTA MHGVGTRVVRRLVEKAGLPEFIGVTEQLNPDPDFPTVAFPNPEEPGAIDLAIAQARKHDA DVVIASDPDADRCAVAAVIDGDWRMLTGDELGTLLGDDALRRGLDGVYANSVVSSTCLGR MAKAAGRKHHMTLTGFKWIGRVPGLVFGYEEAIGYCCDPSHVPDKDGITALATILRLVGE LKASGTTIAERLDEIWAAHGLHRTSQLAVRVTTMSIISQAMDRLRNQPPATLLGDRVDVC DLDDPSNGSGLPQQNAIELTGPRVHVVTRPSGTEPKLKCYLEVRATPAESAADLSATKAR LDADMTTLRDEMSQALGI >gi|302034488|gb|GL383263.1| GENE 162 158143 - 158955 739 270 aa, chain - ## HITS:1 COG:ML0707 KEGG:ns NR:ns ## COG: ML0707 COG0005 # Protein_GI_number: 15827299 # Func_class: F Nucleotide transport and metabolism # Function: Purine nucleoside phosphorylase # Organism: Mycobacterium leprae # 8 268 7 266 268 221 50.0 1e-57 MTSPEFTDPQAIARNAADAIRSRLSLTSVDMGLVLGSGWSAGVDRLGTTLGRIPLSELPG FFAPVVAGHGGDLVAVALPSGKTAVVLTGRTHFYEGRGVEPVVHGVRTVAALGATTMILT NGCGGLDPSWGPGTIVAIRDHINLTGATPLRGATFIDMSTAWTPRLLEVTERVAPGTPTG VYAQFRGPQYETPAEVRMARTIGADLVGMSTALEAIAAREAGLDLLGLSLVTNHAAGVTD APLDHAEVIAAGKQAAPRLASLLADITAAI >gi|302034488|gb|GL383263.1| GENE 163 158864 - 159034 81 56 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSTLVRDRRERMASAALRAMAWGSVNSGDVMGLTLEVFAVSGVPALAMCCDFRQLG >gi|302034488|gb|GL383263.1| GENE 164 159144 - 160523 567 459 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 4 417 6 414 458 223 32 6e-57 MTSMVIIGAGPGGYEAASVAAAGGVEVTVVEETGIGGAAVLTDCVPSKTLIATAEVTSTL RRAAELGLRHTETFEVDLDAVNSRVRQLAQAQSDDISRGLERKGVRLISGRARLATGAPG HLHRVVINDDETIDADIVLLVTGTTPRELPAARCDGERILTWKQVYSMREVPEHLIVVGS GVTGAEFASAYDSLGCPVTLVSSRDQVLPGEDPDAAQVLQQVFESRGMEILSRSRAVSAI RDGDGVVVGLEDGRTVRGSHVLMAVGSTPNSADLGLEEVGVAVGPRGHITVDKVSRTNVP GIYAAGDCTGVFALASVAAMQGRIAVWHALGQALQPLDLSLVCSNVFTSPEIATVGVTQT DVDSGKVQARSTRLDLSTNPRAKMQGLHDGFVKLFCRPATGNIIGGVVVSPRASELIHPI SVAVAERIPVDAFQHDFTVYPSLSGSVSEAARRLQTFVA >gi|302034488|gb|GL383263.1| GENE 165 160562 - 161284 559 240 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4773 NR:ns ## KEGG: HMPREF0675_4773 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 240 11 250 250 430 100.0 1e-119 MSGNLLLFLLFFVGLVATTTSLMRAQRQSRELEAQRAKAIQAKVSQMRQETEEDVTTFGE ALRDLDMEMVGKDISADGRKDWNMALDCYDRAKTLMAQDKSTRSIPLVTETLEEGRHAIA CVQARANGEPIPEVRPPCFFDPAHGPSTTDVMYSPDGGVARKVPACAADAQRVQQGRSPW IRTVDVNGAQLPYWQAGPDYAPWVQGYYRRYESDPVISGLAVGGLGLVGLGLFSALFDDF >gi|302034488|gb|GL383263.1| GENE 166 161341 - 161538 186 65 aa, chain - ## HITS:1 COG:Cgl0680 KEGG:ns NR:ns ## COG: Cgl0680 COG4770 # Protein_GI_number: 19551930 # Func_class: I Lipid transport and metabolism # Function: Acetyl/propionyl-CoA carboxylase, alpha subunit # Organism: Corynebacterium glutamicum # 1 62 529 590 591 73 61.0 9e-14 MQGTIIKVNVVEGEEVNEGDQIVVMEAMKMEQPIAAHRSGIVRNLNAMVGSTVSSGEVVC EIIDE Prediction of potential genes in microbial genomes Time: Thu Jul 21 06:18:38 2011 Seq name: gi|302034487|gb|GL383264.1| Propionibacterium acnes HL025PA2 genomic scaffold Scfld19, whole genome shotgun sequence Length of sequence - 612852 bp Number of predicted genes - 624, with homology - 603 Number of transcription units - 318, operones - 135 average op.length - 3.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 13/0.000 + CDS 99 - 1307 1338 ## COG0126 3-phosphoglycerate kinase 2 1 Op 2 9/0.000 + CDS 1307 - 2086 836 ## COG0149 Triosephosphate isomerase 3 1 Op 3 . + CDS 2187 - 2486 321 ## COG1314 Preprotein translocase subunit SecG + Term 2561 - 2587 -1.0 4 2 Op 1 . + CDS 2604 - 2960 395 ## HMPREF0675_3885 hypothetical protein 5 2 Op 2 . + CDS 2957 - 4402 1042 ## COG0285 Folylpolyglutamate synthase 6 2 Op 3 . + CDS 4465 - 4785 348 ## PPA0822 hypothetical protein 7 2 Op 4 . + CDS 4819 - 5235 424 ## COG0105 Nucleoside diphosphate kinase 8 2 Op 5 1/0.130 + CDS 5281 - 7233 1224 ## COG1032 Fe-S oxidoreductase 9 2 Op 6 2/0.087 + CDS 7236 - 7970 482 ## COG5011 Uncharacterized protein conserved in bacteria 10 3 Tu 1 4/0.058 + CDS 8243 - 10867 1921 ## COG1530 Ribonucleases G and E + Term 10938 - 10976 -0.2 + Prom 10879 - 10938 5.7 11 4 Op 1 32/0.000 + CDS 10998 - 11336 506 ## PROTEIN SUPPORTED gi|213959551|ref|ZP_03387834.1| ribosomal protein L21 12 4 Op 2 . + CDS 11348 - 11617 462 ## PROTEIN SUPPORTED gi|50842315|ref|YP_055542.1| 50S ribosomal protein L27 + Term 11638 - 11677 12.1 13 5 Tu 1 . + CDS 12159 - 12467 114 ## HMPREF0675_3894 hypothetical protein 14 6 Op 1 . + CDS 12568 - 13176 396 ## HMPREF0675_3895 transcriptional regulator, TetR family 15 6 Op 2 . + CDS 13214 - 15034 1536 ## COG0477 Permeases of the major facilitator superfamily + Term 15099 - 15129 -0.6 16 7 Op 1 7/0.014 + CDS 15137 - 16654 1264 ## COG0536 Predicted GTPase 17 7 Op 2 22/0.000 + CDS 16647 - 17822 455 ## COG0263 Glutamate 5-kinase 18 7 Op 3 . + CDS 17877 - 19118 836 ## COG0014 Gamma-glutamyl phosphate reductase 19 7 Op 4 . + CDS 19166 - 19288 67 ## 20 7 Op 5 14/0.000 + CDS 19288 - 19956 476 ## COG1057 Nicotinic acid mononucleotide adenylyltransferase 21 7 Op 6 6/0.029 + CDS 19953 - 20357 246 ## COG0799 Uncharacterized homolog of plant Iojap protein 22 7 Op 7 . + CDS 20438 - 21025 319 ## COG0406 Fructose-2,6-bisphosphatase + Term 21072 - 21100 1.4 + TRNA 21094 - 21166 81.5 # Ala GGC 0 0 23 8 Tu 1 . - CDS 21204 - 22013 290 ## HMPREF0675_3905 hypothetical protein - Prom 22095 - 22154 73.2 24 9 Tu 1 . - CDS 22156 - 22812 165 ## HMPREF0675_3905 hypothetical protein 25 10 Op 1 . + CDS 22906 - 23166 89 ## gi|313764650|gb|EFS36014.1| conserved domain protein 26 10 Op 2 . + CDS 23250 - 23462 188 ## HMPREF0675_3906 hypothetical protein 27 10 Op 3 . + CDS 23432 - 23779 277 ## HMPREF0675_3907 hypothetical protein 28 11 Tu 1 . + CDS 23894 - 24130 198 ## HMPREF0675_3908 hypothetical protein 29 12 Tu 1 . + CDS 24373 - 24693 117 ## HMPREF0675_3910 hypothetical protein 30 13 Op 1 3/0.087 - CDS 25001 - 25378 142 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains 31 13 Op 2 . - CDS 25329 - 25862 177 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains 32 14 Op 1 . - CDS 26067 - 26291 116 ## gi|313764641|gb|EFS36005.1| hypothetical protein HMPREF9567_01492 33 14 Op 2 . - CDS 26337 - 26894 194 ## HMPREF0675_3914 hypothetical protein 34 15 Op 1 . + CDS 27081 - 27368 105 ## HMPREF0675_3915 hypothetical protein 35 15 Op 2 . + CDS 27372 - 27590 82 ## HMPREF0675_3916 hypothetical protein 36 15 Op 3 . + CDS 27593 - 28099 321 ## HMPREF0675_3917 hypothetical protein 37 16 Op 1 . - CDS 28022 - 28207 60 ## 38 16 Op 2 2/0.087 - CDS 28225 - 28407 155 ## COG3328 Transposase and inactivated derivatives 39 17 Op 1 . - CDS 28508 - 28708 94 ## COG3328 Transposase and inactivated derivatives 40 17 Op 2 . - CDS 28606 - 29007 78 ## 41 18 Tu 1 . + CDS 29070 - 29408 166 ## gi|328754890|gb|EGF68506.1| hypothetical protein HMPREF9588_01847 - Term 29327 - 29390 -0.2 42 19 Op 1 . - CDS 29393 - 31258 938 ## HMPREF0675_3920 efflux ABC transporter, permease protein 43 19 Op 2 . - CDS 31246 - 31998 286 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 44 20 Op 1 2/0.087 + CDS 32112 - 33311 606 ## COG4564 Signal transduction histidine kinase 45 20 Op 2 . + CDS 33326 - 34009 590 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 46 20 Op 3 . + CDS 34075 - 34251 91 ## HMPREF0675_3924 hypothetical protein 47 21 Op 1 . - CDS 34303 - 34665 174 ## HMPREF0675_3925 hypothetical protein 48 21 Op 2 . - CDS 34662 - 35777 764 ## HMPREF0675_3926 hypothetical protein 49 22 Op 1 . - CDS 35970 - 36275 239 ## COG5441 Uncharacterized conserved protein 50 22 Op 2 . - CDS 36309 - 36653 128 ## HMPREF0675_3928 hypothetical protein + Prom 36420 - 36479 2.6 51 23 Tu 1 . + CDS 36568 - 36741 100 ## HMPREF0675_3929 hypothetical protein + Term 36833 - 36878 -0.7 52 24 Op 1 . + CDS 37222 - 37461 114 ## PPA0875 GntR family regulatory protein 53 24 Op 2 . + CDS 37461 - 37700 69 ## gi|314987615|gb|EFT31706.1| hypothetical protein HMPREF9595_00770 54 24 Op 3 . + CDS 37720 - 37959 131 ## COG3464 Transposase and inactivated derivatives 55 25 Tu 1 . + CDS 38021 - 38188 148 ## HMPREF0675_3932 hypothetical protein + Term 38381 - 38416 -0.7 56 26 Op 1 . - CDS 38492 - 40831 426 ## COG0178 Excinuclease ATPase subunit 57 26 Op 2 . - CDS 40824 - 41252 185 ## PPA2399 transcriptional repressor, MarR family - Prom 41281 - 41340 2.2 - Term 41569 - 41624 1.1 58 27 Tu 1 . - CDS 41679 - 42623 585 ## COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain - Prom 42680 - 42739 2.2 + Prom 42639 - 42698 1.9 59 28 Op 1 . + CDS 42805 - 43797 1213 ## COG1735 Predicted metal-dependent hydrolase with the TIM-barrel fold 60 28 Op 2 9/0.000 + CDS 43803 - 44456 596 ## COG0269 3-hexulose-6-phosphate synthase and related proteins 61 28 Op 3 8/0.000 + CDS 44453 - 45340 558 ## COG3623 Putative L-xylulose-5-phosphate 3-epimerase 62 28 Op 4 . + CDS 45428 - 46096 611 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 63 28 Op 5 4/0.058 + CDS 46093 - 47043 805 ## COG0524 Sugar kinases, ribokinase family 64 28 Op 6 . + CDS 47078 - 48436 1336 ## COG0477 Permeases of the major facilitator superfamily + Term 48619 - 48654 -0.7 65 29 Tu 1 . - CDS 48850 - 49233 114 ## 66 30 Op 1 6/0.029 + CDS 49055 - 49864 603 ## COG2145 Hydroxyethylthiazole kinase, sugar kinase family 67 30 Op 2 . + CDS 49851 - 50501 501 ## COG0352 Thiamine monophosphate synthase 68 31 Op 1 . + CDS 50614 - 51582 894 ## COG0039 Malate/lactate dehydrogenases 69 31 Op 2 . + CDS 51625 - 53331 1148 ## COG0281 Malic enzyme 70 32 Tu 1 . - CDS 53400 - 53954 302 ## PPA0889 putative glucoamylase S1/S2 precursor 71 33 Tu 1 . + CDS 54094 - 55116 393 ## HMPREF0675_3949 hypothetical protein 72 34 Tu 1 . - CDS 55126 - 55914 791 ## COG1814 Uncharacterized membrane protein 73 35 Tu 1 . + CDS 56104 - 58584 1948 ## COG0495 Leucyl-tRNA synthetase + Term 58617 - 58671 7.6 74 36 Op 1 4/0.058 + CDS 58708 - 59559 262 ## COG1555 DNA uptake protein and related DNA-binding proteins 75 36 Op 2 . + CDS 59546 - 61900 778 ## COG2333 Predicted hydrolase (metallo-beta-lactamase superfamily) 76 36 Op 3 . + CDS 61997 - 63211 806 ## COG1061 DNA or RNA helicases of superfamily II + Prom 63213 - 63272 80.3 77 37 Op 1 . + CDS 63496 - 63834 266 ## HMPREF0675_3954 type III restriction enzyme, res subunit + Term 63988 - 64028 0.1 + Prom 64041 - 64100 2.6 78 37 Op 2 . + CDS 64225 - 65247 815 ## COG1466 DNA polymerase III, delta subunit - Term 65289 - 65330 8.3 79 38 Tu 1 . - CDS 65369 - 65635 418 ## PROTEIN SUPPORTED gi|50842384|ref|YP_055611.1| 30S ribosomal protein S20 80 39 Tu 1 . - CDS 65756 - 67669 1259 ## COG0366 Glycosidases 81 40 Op 1 . + CDS 67797 - 69632 1598 ## COG0481 Membrane GTPase LepA 82 40 Op 2 1/0.130 + CDS 69668 - 70636 453 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 83 40 Op 3 . + CDS 70638 - 72164 803 ## COG1165 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 84 41 Op 1 . - CDS 72137 - 73060 527 ## COG1169 Isochorismate synthase 85 41 Op 2 . - CDS 73006 - 73365 162 ## HMPREF0675_3961 isochorismate synthase (EC:5.4.4.2) - Prom 73482 - 73541 1.8 86 42 Tu 1 . + CDS 73569 - 73784 111 ## 87 43 Op 1 2/0.087 - CDS 73979 - 75229 782 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 88 43 Op 2 . - CDS 75171 - 76160 1007 ## COG0447 Dihydroxynaphthoic acid synthase 89 43 Op 3 . - CDS 76185 - 76706 475 ## COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) - Prom 76793 - 76852 1.8 90 44 Op 1 6/0.029 + CDS 77161 - 77538 351 ## COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases 91 44 Op 2 6/0.029 + CDS 77598 - 77993 270 ## COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases 92 44 Op 3 . + CDS 77903 - 78814 669 ## COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases 93 45 Tu 1 . - CDS 78875 - 79090 99 ## gi|315108458|gb|EFT80434.1| hypothetical protein HMPREF9602_02058 - Prom 79233 - 79292 1.7 94 46 Tu 1 . + CDS 79489 - 80670 756 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases + Term 80700 - 80725 -0.5 95 47 Op 1 . + CDS 80824 - 81621 507 ## HMPREF0675_3970 hypothetical protein 96 47 Op 2 . + CDS 81618 - 82379 447 ## COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family + Term 82381 - 82444 2.7 97 48 Tu 1 . - CDS 82398 - 83069 414 ## COG0491 Zn-dependent hydrolases, including glyoxylases 98 49 Op 1 3/0.087 + CDS 83214 - 84233 778 ## COG1420 Transcriptional regulator of heat shock gene 99 49 Op 2 4/0.058 + CDS 84237 - 85415 769 ## COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain 100 49 Op 3 . + CDS 85412 - 86152 532 ## COG1385 Uncharacterized protein conserved in bacteria + Term 86158 - 86197 3.5 101 50 Op 1 2/0.087 - CDS 86169 - 87215 1022 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 102 50 Op 2 . - CDS 87244 - 89151 1262 ## COG2213 Phosphotransferase system, mannitol-specific IIBC component - Prom 89204 - 89263 2.9 - Term 89264 - 89314 14.5 103 51 Op 1 . - CDS 89342 - 89743 387 ## COG2259 Predicted membrane protein 104 51 Op 2 . - CDS 89905 - 92055 951 ## COG0514 Superfamily II DNA helicase 105 51 Op 3 . - CDS 92138 - 93355 829 ## COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) 106 51 Op 4 . - CDS 93398 - 94249 738 ## COG5006 Predicted permease, DMT superfamily - Prom 94318 - 94377 2.1 107 52 Op 1 . + CDS 94336 - 95577 1111 ## COG0343 Queuine/archaeosine tRNA-ribosyltransferase 108 52 Op 2 19/0.000 + CDS 95625 - 96974 983 ## COG4585 Signal transduction histidine kinase 109 52 Op 3 . + CDS 96974 - 97630 704 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 110 52 Op 4 9/0.000 + CDS 97715 - 98647 265 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 111 52 Op 5 . + CDS 98644 - 99855 862 ## COG1668 ABC-type Na+ efflux pump, permease component 112 53 Tu 1 . - CDS 100037 - 100666 533 ## COG1738 Uncharacterized conserved protein 113 54 Tu 1 . + CDS 100827 - 101834 949 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) + Term 102080 - 102122 -0.5 114 55 Op 1 . - CDS 101968 - 102381 332 ## HMPREF0675_3990 hypothetical protein 115 55 Op 2 . - CDS 102401 - 103534 403 ## HMPREF0675_3991 hypothetical protein 116 56 Op 1 17/0.000 + CDS 103703 - 104647 788 ## COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase 117 56 Op 2 13/0.000 + CDS 104644 - 105111 413 ## COG0319 Predicted metal-dependent hydrolase 118 56 Op 3 1/0.130 + CDS 105108 - 106406 1010 ## COG1253 Hemolysins and related proteins containing CBS domains 119 56 Op 4 . + CDS 106399 - 107421 832 ## COG1159 GTPase 120 57 Tu 1 . - CDS 107450 - 108940 743 ## COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold - Prom 109116 - 109175 1.6 121 58 Tu 1 . + CDS 109142 - 110887 1286 ## COG0119 Isopropylmalate/homocitrate/citramalate synthases 122 59 Tu 1 . - CDS 110896 - 111702 567 ## COG0020 Undecaprenyl pyrophosphate synthase 123 60 Tu 1 . - CDS 111804 - 112469 468 ## PPA0943 hypothetical protein 124 61 Tu 1 . + CDS 112591 - 113331 442 ## COG1381 Recombinational DNA repair protein (RecF pathway) + Term 113398 - 113426 -0.9 125 62 Tu 1 . - CDS 113429 - 114412 524 ## HMPREF0675_4001 histidine kinase 126 63 Tu 1 . - CDS 114646 - 114831 195 ## HMPREF0675_4002 hypothetical protein - Prom 114957 - 115016 1.6 + Prom 115037 - 115096 1.5 127 64 Tu 1 . + CDS 115175 - 115846 522 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 128 65 Tu 1 . - CDS 115847 - 116263 274 ## COG0735 Fe2+/Zn2+ uptake regulation proteins - Prom 116355 - 116414 2.6 + Prom 116329 - 116388 1.9 129 66 Tu 1 . + CDS 116485 - 117876 1245 ## COG0423 Glycyl-tRNA synthetase (class II) 130 67 Op 1 . + CDS 118016 - 118786 495 ## PPA0950 putative succinate dehydrogenase subunit C 131 67 Op 2 36/0.000 + CDS 118783 - 120915 1560 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 132 67 Op 3 . + CDS 120912 - 121670 427 ## COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit 133 68 Tu 1 . - CDS 121869 - 123635 1134 ## COG0778 Nitroreductase 134 69 Op 1 . + CDS 123794 - 124918 447 ## PROTEIN SUPPORTED gi|148828154|ref|YP_001292907.1| ribosomal protein L11 methyltransferase 135 69 Op 2 . + CDS 124967 - 126085 696 ## COG0232 dGTP triphosphohydrolase + Term 126104 - 126141 5.0 136 70 Tu 1 . - CDS 126105 - 127013 642 ## COG0390 ABC-type uncharacterized transport system, permease component 137 71 Op 1 31/0.000 + CDS 126921 - 128774 1315 ## COG0358 DNA primase (bacterial type) + Term 128782 - 128824 5.0 138 71 Op 2 . + CDS 128861 - 129673 443 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 139 71 Op 3 . + CDS 129687 - 130193 383 ## HMPREF0675_4016 hypothetical protein + Term 130308 - 130374 30.0 + TRNA 130290 - 130362 80.9 # Asn GTT 0 0 140 72 Op 1 1/0.130 - CDS 130507 - 131487 675 ## COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 141 72 Op 2 . - CDS 131529 - 132932 1321 ## COG0380 Trehalose-6-phosphate synthase 142 73 Tu 1 . + CDS 132910 - 133950 611 ## COG1877 Trehalose-6-phosphatase 143 74 Tu 1 . - CDS 133997 - 134233 137 ## gi|313792218|gb|EFS40319.1| hypothetical protein HMPREF9575_02208 - Prom 134274 - 134333 1.6 144 75 Tu 1 . + CDS 134496 - 135431 768 ## PROTEIN SUPPORTED gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 145 76 Tu 1 . - CDS 135493 - 136809 537 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 146 77 Op 1 16/0.000 + CDS 136980 - 137894 903 ## COG0214 Pyridoxine biosynthesis enzyme 147 77 Op 2 . + CDS 137896 - 138501 410 ## COG0311 Predicted glutamine amidotransferase involved in pyridoxine biosynthesis 148 78 Op 1 12/0.000 + CDS 138653 - 139924 836 ## COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 149 78 Op 2 . + CDS 139921 - 140625 515 ## COG0132 Dethiobiotin synthetase 150 78 Op 3 . + CDS 140622 - 141983 1197 ## COG0531 Amino acid transporters 151 79 Tu 1 . - CDS 142008 - 142199 70 ## PPA0970 putative membrane efflux protein - Prom 142381 - 142440 1.8 + Prom 142246 - 142305 2.9 152 80 Tu 1 . + CDS 142526 - 142801 167 ## PPA0971 hypothetical protein + Term 142811 - 142877 30.0 + TRNA 142793 - 142866 85.0 # Met CAT 0 0 153 81 Tu 1 . - CDS 143158 - 143403 111 ## PPA0972 hypothetical protein - Prom 143525 - 143584 3.2 154 82 Tu 1 . + CDS 143456 - 143776 120 ## gi|314984008|gb|EFT28100.1| hypothetical protein HMPREF9594_02233 + Term 143783 - 143818 0.2 155 83 Op 1 . - CDS 143949 - 144746 660 ## COG0561 Predicted hydrolases of the HAD superfamily 156 83 Op 2 . - CDS 144746 - 145678 220 ## PPA2378 hypothetical protein 157 84 Op 1 . + CDS 145576 - 145833 153 ## HMPREF0675_4034 hypothetical protein 158 84 Op 2 23/0.000 + CDS 145890 - 146948 992 ## COG0714 MoxR-like ATPases 159 84 Op 3 3/0.087 + CDS 146959 - 148002 827 ## COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 160 84 Op 4 5/0.043 + CDS 147999 - 148967 594 ## COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain 161 84 Op 5 . + CDS 148967 - 149920 518 ## COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain 162 84 Op 6 . + CDS 149969 - 150685 482 ## COG0325 Predicted enzyme with a TIM-barrel fold 163 84 Op 7 . + CDS 150763 - 151260 190 ## HMPREF0675_4040 hypothetical protein + Term 151446 - 151475 0.1 - Term 151285 - 151342 14.3 164 85 Op 1 27/0.000 - CDS 151346 - 152617 1059 ## COG0304 3-oxoacyl-(acyl-carrier-protein) synthase 165 85 Op 2 6/0.029 - CDS 152691 - 152936 417 ## COG0236 Acyl carrier protein 166 85 Op 3 14/0.000 - CDS 153019 - 154017 1002 ## COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III 167 85 Op 4 . - CDS 154014 - 155015 831 ## COG0331 (acyl-carrier-protein) S-malonyltransferase 168 85 Op 5 . - CDS 155075 - 155320 150 ## PPA0985 2-dehydropantoate 2-reductase (EC:1.1.1.169) 169 85 Op 6 . - CDS 155154 - 155990 64 ## COG1893 Ketopantoate reductase 170 85 Op 7 . - CDS 155987 - 156352 261 ## PPA0986 hypothetical protein 171 86 Tu 1 . + CDS 156515 - 157960 1016 ## COG0477 Permeases of the major facilitator superfamily 172 87 Tu 1 . - CDS 157989 - 159110 668 ## COG2508 Regulator of polyketide synthase expression + Prom 159329 - 159388 2.3 173 88 Tu 1 . + CDS 159472 - 162225 2494 ## COG2609 Pyruvate dehydrogenase complex, dehydrogenase (E1) component + Term 162245 - 162289 8.1 + Prom 162266 - 162325 5.1 174 89 Op 1 . + CDS 162397 - 163305 307 ## PPA0990 endo-beta-N-acetylglucosaminidase H (EC:3.2.1.96) 175 89 Op 2 . + CDS 163359 - 163814 386 ## PPA0991 hypothetical protein - Term 163776 - 163809 3.3 176 90 Tu 1 . - CDS 163826 - 164071 212 ## COG1472 Beta-glucosidase-related glycosidases 177 91 Tu 1 . - CDS 164345 - 164926 433 ## COG1335 Amidases related to nicotinamidase + Prom 164744 - 164803 2.0 178 92 Tu 1 . + CDS 164971 - 165981 768 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 179 93 Op 1 8/0.000 + CDS 166133 - 166708 478 ## COG2065 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase 180 93 Op 2 15/0.000 + CDS 166705 - 167649 766 ## COG0540 Aspartate carbamoyltransferase, catalytic chain 181 93 Op 3 7/0.014 + CDS 167646 - 168983 1092 ## COG0044 Dihydroorotase and related cyclic amidohydrolases 182 93 Op 4 24/0.000 + CDS 168980 - 170068 887 ## COG0505 Carbamoylphosphate synthase small subunit 183 93 Op 5 3/0.087 + CDS 170068 - 173274 2807 ## COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) 184 93 Op 6 13/0.000 + CDS 173313 - 174068 436 ## COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 185 93 Op 7 5/0.043 + CDS 174065 - 174988 874 ## COG0167 Dihydroorotate dehydrogenase 186 93 Op 8 9/0.000 + CDS 175014 - 175724 545 ## COG0284 Orotidine-5'-phosphate decarboxylase 187 93 Op 9 . + CDS 175752 - 176402 522 ## COG0461 Orotate phosphoribosyltransferase 188 94 Tu 1 . - CDS 176783 - 177589 544 ## COG3001 Fructosamine-3-kinase 189 95 Tu 1 . + CDS 177636 - 179045 1321 ## PROTEIN SUPPORTED gi|229861541|ref|ZP_04481155.1| SSU ribosomal protein S12P methylthiotransferase 190 96 Op 1 6/0.029 + CDS 179154 - 179768 629 ## COG0558 Phosphatidylglycerophosphate synthase 191 96 Op 2 2/0.087 + CDS 179765 - 180250 228 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase 192 97 Tu 1 . + CDS 180352 - 180627 393 ## COG1396 Predicted transcriptional regulators + Term 180850 - 180883 -0.5 - Term 180564 - 180607 2.7 193 98 Tu 1 . - CDS 180729 - 181532 608 ## COG1349 Transcriptional regulators of sugar metabolism 194 99 Tu 1 . + CDS 181883 - 182077 176 ## HMPREF0675_4070 hypothetical protein 195 100 Op 1 14/0.000 + CDS 182388 - 183434 1077 ## COG0468 RecA/RadA recombinase 196 100 Op 2 1/0.130 + CDS 183464 - 183979 221 ## COG2137 Uncharacterized protein conserved in bacteria 197 101 Tu 1 . + CDS 184083 - 185711 982 ## COG1418 Predicted HD superfamily hydrolase 198 102 Tu 1 . - CDS 185752 - 186651 509 ## COG2017 Galactose mutarotase and related enzymes 199 103 Op 1 . + CDS 186601 - 186807 127 ## gi|314962818|gb|EFT06918.1| hypothetical protein HMPREF9618_02147 200 103 Op 2 . + CDS 186815 - 188356 1321 ## COG1288 Predicted membrane protein 201 103 Op 3 . + CDS 188417 - 189901 535 ## PROTEIN SUPPORTED gi|227395721|ref|ZP_03879044.1| SSU ribosomal protein S12P methylthiotransferase + Term 190040 - 190081 1.0 - Term 189939 - 189984 14.2 202 104 Tu 1 . - CDS 190052 - 190252 308 ## PPA1018 hypothetical protein - Prom 190350 - 190409 1.8 203 105 Op 1 4/0.058 + CDS 190371 - 191330 732 ## COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase 204 105 Op 2 3/0.087 + CDS 191335 - 192156 542 ## COG0253 Diaminopimelate epimerase 205 105 Op 3 . + CDS 192211 - 193692 618 ## PROTEIN SUPPORTED gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 206 105 Op 4 . + CDS 193682 - 195733 1037 ## COG1199 Rad3-related DNA helicases + Term 195817 - 195853 -0.8 207 106 Tu 1 . - CDS 195843 - 196517 472 ## COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) 208 107 Tu 1 . + CDS 196785 - 197135 180 ## PPA1024 hypothetical protein + Prom 197202 - 197261 3.2 209 108 Op 1 . + CDS 197360 - 197866 378 ## COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains 210 108 Op 2 . + CDS 197948 - 200800 2451 ## COG0209 Ribonucleotide reductase, alpha subunit + Term 200813 - 200852 6.5 211 109 Op 1 . + CDS 200961 - 201893 641 ## PPA1027 hypothetical protein + Term 201936 - 201966 0.7 212 109 Op 2 . + CDS 201977 - 202831 669 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins 213 110 Tu 1 . + CDS 203266 - 207351 2546 ## COG1643 HrpA-like helicases + Term 207380 - 207409 1.2 214 111 Tu 1 . + CDS 207515 - 208411 458 ## COG1946 Acyl-CoA thioesterase 215 112 Tu 1 . - CDS 208468 - 209406 894 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) - Prom 209602 - 209661 1.9 + Prom 209460 - 209519 2.9 216 113 Op 1 . + CDS 209624 - 209848 90 ## 217 113 Op 2 . + CDS 209754 - 211274 1605 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) - Term 211279 - 211318 8.1 218 114 Tu 1 . - CDS 211347 - 213920 1374 ## COG3250 Beta-galactosidase/beta-glucuronidase + Prom 213942 - 214001 2.0 219 115 Tu 1 . + CDS 214026 - 214634 443 ## PPA1034 transcriptional regulator 220 116 Tu 1 . - CDS 214578 - 215774 777 ## COG0657 Esterase/lipase 221 117 Tu 1 . + CDS 215917 - 216165 216 ## HMPREF0675_4095 hypothetical protein 222 118 Op 1 . + CDS 216305 - 217087 584 ## PPA1037 hypothetical protein 223 118 Op 2 . + CDS 217065 - 217358 243 ## HMPREF0675_4097 hypothetical protein 224 118 Op 3 . + CDS 217436 - 218710 1466 ## HMPREF0675_4098 hypothetical protein 225 119 Tu 1 . + CDS 218831 - 219412 348 ## HMPREF0675_4099 acetyltransferase, GNAT family 226 120 Op 1 . - CDS 219489 - 219719 270 ## HMPREF0675_4100 hypothetical protein 227 120 Op 2 . - CDS 219740 - 220033 133 ## gi|289427247|ref|ZP_06428963.1| conserved hypothetical protein 228 121 Tu 1 . + CDS 219912 - 222008 2002 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit + Term 222063 - 222094 0.0 - Term 221797 - 221845 -0.0 229 122 Tu 1 . - CDS 222060 - 222584 115 ## gi|315108316|gb|EFT80292.1| hypothetical protein HMPREF9602_01914 230 123 Op 1 . + CDS 222354 - 223673 1071 ## COG2704 Anaerobic C4-dicarboxylate transporter 231 123 Op 2 . + CDS 223726 - 225069 992 ## COG2270 Permeases of the major facilitator superfamily 232 124 Op 1 . - CDS 225066 - 225200 67 ## HMPREF0675_4104 hypothetical protein 233 124 Op 2 . - CDS 225248 - 227782 2046 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 234 124 Op 3 . - CDS 227846 - 228940 679 ## COG4850 Uncharacterized conserved protein 235 125 Op 1 . + CDS 228843 - 229583 273 ## HMPREF0675_4106 hypothetical protein 236 125 Op 2 . + CDS 229580 - 230707 488 ## COG1524 Uncharacterized proteins of the AP superfamily 237 125 Op 3 . + CDS 230710 - 231360 406 ## COG1435 Thymidine kinase 238 126 Tu 1 . - CDS 231418 - 232497 658 ## HMPREF0675_4110 hypothetical protein 239 127 Tu 1 . + CDS 232706 - 233002 296 ## HMPREF0675_4111 hypothetical protein + Term 233016 - 233064 13.3 - Term 233005 - 233053 14.2 240 128 Tu 1 . - CDS 233072 - 233371 284 ## HMPREF0675_4112 hypothetical protein + Prom 233319 - 233378 1.6 241 129 Op 1 . + CDS 233413 - 233943 217 ## HMPREF0675_4113 hypothetical protein 242 129 Op 2 . + CDS 233936 - 234394 427 ## COG0756 dUTPase 243 129 Op 3 . + CDS 234438 - 235172 795 ## HMPREF0675_4115 hypothetical protein 244 129 Op 4 . + CDS 235175 - 235567 305 ## HMPREF0675_4116 nucleic acid-binding domain protein + Term 235603 - 235649 7.5 245 130 Op 1 1/0.130 - CDS 235648 - 236307 353 ## COG0569 K+ transport systems, NAD-binding component 246 130 Op 2 . - CDS 236348 - 237010 466 ## COG0569 K+ transport systems, NAD-binding component + Prom 236946 - 237005 2.0 247 131 Op 1 2/0.087 + CDS 237194 - 239218 1248 ## COG0531 Amino acid transporters 248 131 Op 2 . + CDS 239249 - 240430 625 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase + Prom 240690 - 240749 2.2 249 132 Tu 1 . + CDS 240825 - 243491 2266 ## COG1048 Aconitase A + Term 243497 - 243538 11.8 250 133 Tu 1 . + CDS 243792 - 245696 1264 ## COG1154 Deoxyxylulose-5-phosphate synthase 251 134 Op 1 . - CDS 245712 - 246950 341 ## COG0349 Ribonuclease D 252 134 Op 2 . - CDS 246947 - 247516 438 ## HMPREF0675_4124 hypothetical protein 253 135 Tu 1 . - CDS 247635 - 248081 351 ## COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase 254 136 Tu 1 . - CDS 248272 - 249045 490 ## PPA1066 hypothetical protein - Prom 249223 - 249282 2.6 255 137 Tu 1 . - CDS 249309 - 250010 304 ## COG2964 Uncharacterized protein conserved in bacteria 256 138 Op 1 . + CDS 250029 - 250223 63 ## gi|327453913|gb|EGF00568.1| hypothetical protein HMPREF9586_01873 257 138 Op 2 . + CDS 250198 - 251574 1253 ## COG3033 Tryptophanase 258 138 Op 3 . + CDS 251579 - 253033 885 ## COG1113 Gamma-aminobutyrate permease and related permeases + Term 253221 - 253262 0.2 259 139 Tu 1 . + CDS 253429 - 254283 548 ## COG2326 Uncharacterized conserved protein + Term 254400 - 254432 -1.0 - TRNA 254393 - 254464 75.5 # Val GAC 0 0 - Term 254345 - 254385 9.6 260 140 Tu 1 . - CDS 254444 - 254791 89 ## - Prom 255031 - 255090 77.2 - TRNA 254466 - 254536 64.3 # Cys GCA 0 0 - TRNA 254565 - 254637 88.5 # Gly GCC 0 0 + TRNA 255016 - 255090 78.3 # Val CAC 0 0 + Prom 255016 - 255075 77.9 261 141 Op 1 . + CDS 255265 - 256326 967 ## COG1064 Zn-dependent alcohol dehydrogenases 262 141 Op 2 . + CDS 256323 - 256550 82 ## gi|314918314|gb|EFS82145.1| hypothetical protein HMPREF9598_01291 263 141 Op 3 19/0.000 + CDS 256547 - 257815 863 ## COG4585 Signal transduction histidine kinase 264 141 Op 4 . + CDS 257812 - 258444 510 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 265 141 Op 5 4/0.058 + CDS 258533 - 260587 2015 ## COG0441 Threonyl-tRNA synthetase 266 141 Op 6 3/0.087 + CDS 260580 - 261140 402 ## COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 267 141 Op 7 . + CDS 261118 - 261756 526 ## COG0558 Phosphatidylglycerophosphate synthase 268 141 Op 8 2/0.087 + CDS 261802 - 262455 195 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase 269 141 Op 9 5/0.043 + CDS 262476 - 263219 356 ## COG3879 Uncharacterized protein conserved in bacteria 270 141 Op 10 5/0.043 + CDS 263262 - 263594 450 ## COG3856 Uncharacterized conserved protein (small basic protein) 271 141 Op 11 2/0.087 + CDS 263587 - 264339 558 ## COG3879 Uncharacterized protein conserved in bacteria 272 141 Op 12 3/0.087 + CDS 264416 - 264808 249 ## COG0509 Glycine cleavage system H protein (lipoate-binding) 273 141 Op 13 4/0.058 + CDS 264859 - 265383 414 ## COG1716 FOG: FHA domain 274 141 Op 14 4/0.058 + CDS 265383 - 266096 529 ## COG0789 Predicted transcriptional regulators 275 141 Op 15 4/0.058 + CDS 266127 - 266606 423 ## COG1259 Uncharacterized conserved protein 276 142 Tu 1 . + CDS 266788 - 267375 556 ## COG0789 Predicted transcriptional regulators + Term 267387 - 267423 -0.7 277 143 Op 1 . + CDS 267483 - 268739 869 ## COG1295 Predicted membrane protein 278 143 Op 2 . + CDS 268762 - 269181 146 ## 279 143 Op 3 . + CDS 268970 - 270121 762 ## COG0477 Permeases of the major facilitator superfamily + Term 270267 - 270301 0.6 280 144 Tu 1 . - CDS 270202 - 271401 1344 ## COG0205 6-phosphofructokinase 281 145 Op 1 . + CDS 271628 - 271999 179 ## PPA1091 hypothetical protein 282 145 Op 2 1/0.130 + CDS 272026 - 272646 538 ## COG0009 Putative translation factor (SUA5) 283 145 Op 3 . + CDS 272706 - 273395 485 ## COG0775 Nucleoside phosphorylase 284 146 Op 1 . - CDS 273404 - 274333 546 ## COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase 285 146 Op 2 . - CDS 274360 - 274932 256 ## COG1739 Uncharacterized conserved protein 286 146 Op 3 . - CDS 275007 - 276761 1056 ## COG1289 Predicted membrane protein - Prom 276802 - 276861 4.4 287 147 Op 1 . - CDS 276963 - 277574 389 ## COG0443 Molecular chaperone 288 147 Op 2 . - CDS 277610 - 278626 639 ## HMPREF0675_4161 hypothetical protein - Prom 278857 - 278916 2.0 + Prom 278611 - 278670 1.8 289 148 Tu 1 . + CDS 278747 - 279517 448 ## COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 290 149 Tu 1 . - CDS 279521 - 280339 542 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 291 150 Op 1 . + CDS 280432 - 280683 146 ## gi|314955732|gb|EFT00134.1| hypothetical protein HMPREF9609_01308 292 150 Op 2 . + CDS 280716 - 281423 606 ## COG1637 Predicted nuclease of the RecB family + Term 281432 - 281486 1.5 293 151 Tu 1 . - CDS 281486 - 282823 1372 ## HMPREF0675_4165 hypothetical protein - Prom 282846 - 282905 1.9 - Term 282892 - 282938 8.0 294 152 Tu 1 . - CDS 282957 - 283415 565 ## COG0346 Lactoylglutathione lyase and related lyases 295 153 Tu 1 . + CDS 283278 - 283571 147 ## + Term 283609 - 283650 0.6 - Term 283990 - 284044 21.2 296 154 Tu 1 . - CDS 284061 - 285692 1618 ## COG0033 Phosphoglucomutase - Prom 285720 - 285779 1.6 297 155 Tu 1 . + CDS 285816 - 286757 728 ## COG3118 Thioredoxin domain-containing protein 298 156 Tu 1 . - CDS 286815 - 287045 90 ## gi|315092794|gb|EFT64770.1| hypothetical protein HMPREF9582_01219 - Prom 287111 - 287170 1.6 299 157 Op 1 11/0.000 + CDS 286962 - 287696 649 ## COG0637 Predicted phosphatase/phosphohexomutase 300 157 Op 2 . + CDS 287717 - 290200 1695 ## COG1554 Trehalose and maltose hydrolases (possible phosphorylases) - Term 290199 - 290253 4.6 301 158 Tu 1 . - CDS 290300 - 292345 2047 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 302 159 Op 1 . - CDS 292615 - 293409 422 ## PROTEIN SUPPORTED gi|227379795|ref|ZP_03863252.1| acetyltransferase, ribosomal protein N-acetylase 303 159 Op 2 2/0.087 - CDS 293433 - 295367 1746 ## COG0296 1,4-alpha-glucan branching enzyme 304 159 Op 3 4/0.058 - CDS 295446 - 296744 658 ## COG3281 Uncharacterized protein, probably involved in trehalose biosynthesis 305 159 Op 4 7/0.014 - CDS 296741 - 298513 1224 ## COG0366 Glycosidases 306 159 Op 5 2/0.087 - CDS 298510 - 300636 1512 ## COG0366 Glycosidases 307 160 Tu 1 . - CDS 300888 - 303008 1283 ## COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases - Prom 303056 - 303115 1.6 + Prom 303020 - 303079 1.8 308 161 Op 1 7/0.014 + CDS 303165 - 304304 572 ## COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 309 161 Op 2 . + CDS 304394 - 305494 768 ## COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 310 162 Op 1 . + CDS 305617 - 306477 290 ## HMPREF0675_4180 methionine synthase, vitamin-B12 independent (EC:2.1.1.14) 311 162 Op 2 . + CDS 306488 - 306700 278 ## HMPREF0675_4181 hypothetical protein - Term 306581 - 306618 -1.0 312 163 Op 1 . - CDS 306726 - 307238 521 ## PPA1120 hypothetical protein 313 163 Op 2 . - CDS 307245 - 307856 553 ## PPA1121 hypothetical protein 314 164 Op 1 31/0.000 + CDS 307998 - 308321 240 ## COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit 315 164 Op 2 21/0.000 + CDS 308318 - 309823 438 ## PROTEIN SUPPORTED gi|163737840|ref|ZP_02145257.1| 30S ribosomal protein S4 316 164 Op 3 . + CDS 309820 - 311313 1199 ## COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) + Term 311539 - 311569 3.7 317 165 Tu 1 . - CDS 311336 - 311971 470 ## HMPREF0675_4187 conserved hypothetical protein TIGR03085 318 166 Op 1 . + CDS 312060 - 312437 266 ## COG0139 Phosphoribosyl-AMP cyclohydrolase 319 166 Op 2 . + CDS 312434 - 312751 299 ## HMPREF0675_4189 hypothetical protein 320 166 Op 3 . + CDS 312799 - 313437 147 ## PPA1128 hypothetical protein 321 167 Op 1 . + CDS 313551 - 313766 248 ## HMPREF0675_4191 hypothetical protein 322 167 Op 2 13/0.000 + CDS 313767 - 314567 617 ## COG0134 Indole-3-glycerol phosphate synthase 323 167 Op 3 37/0.000 + CDS 314595 - 315851 907 ## COG0133 Tryptophan synthase beta chain 324 167 Op 4 3/0.087 + CDS 315848 - 316345 177 ## PROTEIN SUPPORTED gi|149916131|ref|ZP_01904653.1| 50S ribosomal protein L25/general stress protein Ctc 325 167 Op 5 . + CDS 316342 - 317181 614 ## COG0682 Prolipoprotein diacylglyceryltransferase 326 168 Op 1 21/0.000 + CDS 317303 - 321820 3385 ## COG0069 Glutamate synthase domain 2 327 168 Op 2 . + CDS 321813 - 323285 1155 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases 328 168 Op 3 . + CDS 323373 - 323651 233 ## HMPREF0675_4198 hypothetical protein 329 168 Op 4 . + CDS 323661 - 325850 1085 ## COG1680 Beta-lactamase class C and other penicillin binding proteins 330 169 Op 1 . - CDS 325949 - 326596 676 ## COG3247 Uncharacterized conserved protein 331 169 Op 2 . - CDS 326606 - 327478 675 ## COG1737 Transcriptional regulators + Prom 327466 - 327525 5.9 332 170 Op 1 9/0.000 + CDS 327604 - 328518 461 ## COG2103 Predicted sugar phosphate isomerase 333 170 Op 2 . + CDS 328538 - 330055 1113 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 334 170 Op 3 . + CDS 330062 - 330505 242 ## PPA1143 hypothetical protein 335 170 Op 4 . + CDS 330486 - 331430 465 ## COG2971 Predicted N-acetylglucosamine kinase 336 171 Op 1 . + CDS 331559 - 332437 198 ## HMPREF0675_4205 Tat (twin-arginine translocation) pathway signal sequence 337 171 Op 2 . + CDS 332434 - 333864 849 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase 338 171 Op 3 . + CDS 333926 - 334204 177 ## HMPREF0675_4207 PTS system, lactose/cellobiose specific IIB subunit 339 171 Op 4 13/0.000 + CDS 334210 - 335478 585 ## COG1455 Phosphotransferase system cellobiose-specific component IIC 340 171 Op 5 . + CDS 335475 - 335840 266 ## COG1447 Phosphotransferase system cellobiose-specific component IIA 341 172 Op 1 . + CDS 336540 - 336743 78 ## gi|313792017|gb|EFS40118.1| hypothetical protein HMPREF9575_02002 342 172 Op 2 . + CDS 336805 - 340377 3384 ## COG0587 DNA polymerase III, alpha subunit 343 172 Op 3 . + CDS 340383 - 340928 352 ## HMPREF0675_4212 hypothetical protein 344 172 Op 4 19/0.000 + CDS 340933 - 342252 949 ## COG0141 Histidinol dehydrogenase 345 172 Op 5 13/0.000 + CDS 342249 - 343415 850 ## COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 346 172 Op 6 18/0.000 + CDS 343412 - 344032 478 ## COG0131 Imidazoleglycerol-phosphate dehydratase 347 172 Op 7 25/0.000 + CDS 344025 - 344642 424 ## COG0118 Glutamine amidotransferase 348 172 Op 8 . + CDS 344655 - 345422 358 ## COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase + Prom 345429 - 345488 2.6 349 173 Op 1 8/0.000 + CDS 345572 - 346366 871 ## COG0217 Uncharacterized conserved protein 350 173 Op 2 14/0.000 + CDS 346408 - 346953 270 ## COG0817 Holliday junction resolvasome, endonuclease subunit 351 173 Op 3 29/0.000 + CDS 346950 - 347555 500 ## COG0632 Holliday junction resolvasome, DNA-binding subunit 352 173 Op 4 . + CDS 347609 - 348631 496 ## COG2255 Holliday junction resolvasome, helicase subunit 353 173 Op 5 . + CDS 348692 - 349123 371 ## HMPREF0675_4222 preprotein translocase, YajC subunit 354 173 Op 6 31/0.000 + CDS 349196 - 350854 1118 ## COG0342 Preprotein translocase subunit SecD 355 173 Op 7 . + CDS 350856 - 352031 1057 ## COG0341 Preprotein translocase subunit SecF 356 173 Op 8 . + CDS 352028 - 352561 400 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins 357 173 Op 9 3/0.087 + CDS 352564 - 353256 416 ## COG1226 Kef-type K+ transport systems, predicted NAD-binding component 358 173 Op 10 . + CDS 353311 - 353658 282 ## COG1226 Kef-type K+ transport systems, predicted NAD-binding component 359 174 Tu 1 . - CDS 353629 - 353859 74 ## 360 175 Tu 1 . + CDS 353788 - 356112 1969 ## COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases + Term 356246 - 356299 -0.4 361 176 Tu 1 . - CDS 356177 - 357460 1333 ## HMPREF0675_4229 hypothetical protein 362 177 Op 1 4/0.058 + CDS 357453 - 358124 501 ## COG0491 Zn-dependent hydrolases, including glyoxylases + Term 358179 - 358206 -0.1 363 177 Op 2 . + CDS 358224 - 359588 1215 ## COG0124 Histidyl-tRNA synthetase 364 178 Op 1 . - CDS 359645 - 360337 528 ## HMPREF0675_4231 hypothetical protein 365 178 Op 2 . - CDS 360330 - 360893 336 ## PROTEIN SUPPORTED gi|229859876|ref|ZP_04479533.1| acetyltransferase, ribosomal protein N-acetylase 366 178 Op 3 . - CDS 360927 - 365309 3259 ## COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) 367 179 Op 1 . + CDS 365444 - 366088 541 ## COG1309 Transcriptional regulator 368 179 Op 2 . + CDS 366208 - 367278 848 ## PPA1174 hypothetical protein + Term 367293 - 367342 18.2 369 180 Tu 1 . - CDS 367111 - 367473 107 ## + Prom 367353 - 367412 2.2 370 181 Tu 1 . + CDS 367459 - 369279 1521 ## COG0173 Aspartyl-tRNA synthetase 371 182 Op 1 . + CDS 369381 - 370769 910 ## COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase 372 182 Op 2 . + CDS 370766 - 371227 437 ## PPA1177 hypothetical protein 373 183 Op 1 9/0.000 + CDS 371373 - 374051 2369 ## COG0013 Alanyl-tRNA synthetase 374 183 Op 2 4/0.058 + CDS 374048 - 374530 293 ## COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 375 183 Op 3 4/0.058 + CDS 374527 - 375636 1065 ## COG1559 Predicted periplasmic solute-binding protein 376 183 Op 4 5/0.043 + CDS 375668 - 376474 532 ## COG0169 Shikimate 5-dehydrogenase 377 183 Op 5 7/0.014 + CDS 376488 - 377684 663 ## COG0082 Chorismate synthase 378 183 Op 6 20/0.000 + CDS 377681 - 378184 322 ## COG0703 Shikimate kinase 379 183 Op 7 . + CDS 378187 - 379272 847 ## COG0337 3-dehydroquinate synthetase - Term 379183 - 379230 0.3 380 184 Tu 1 . - CDS 379315 - 380415 503 ## COG2843 Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) 381 185 Tu 1 . - CDS 380557 - 381507 593 ## COG2326 Uncharacterized conserved protein 382 186 Tu 1 . - CDS 381655 - 381870 126 ## 383 187 Op 1 6/0.029 + CDS 381784 - 382353 667 ## COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) 384 187 Op 2 . + CDS 382350 - 383135 231 ## COG0781 Transcription termination factor 385 187 Op 3 . + CDS 383231 - 383551 249 ## PPA1189 integration host factor 386 187 Op 4 . + CDS 383606 - 384583 766 ## COG0194 Guanylate kinase 387 187 Op 5 4/0.058 + CDS 384596 - 385828 612 ## COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase 388 187 Op 6 2/0.087 + CDS 385868 - 387061 890 ## COG0192 S-adenosylmethionine synthetase 389 187 Op 7 4/0.058 + CDS 387109 - 389118 313 ## COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase 390 187 Op 8 20/0.000 + CDS 389137 - 390084 275 ## COG0223 Methionyl-tRNA formyltransferase 391 187 Op 9 . + CDS 390081 - 391457 656 ## COG0144 tRNA and rRNA cytosine-C5-methylases + Prom 391459 - 391518 2.3 392 188 Tu 1 . + CDS 391597 - 392367 610 ## PPA1197 hypothetical protein 393 189 Tu 1 . + CDS 392713 - 393558 969 ## HMPREF0675_4260 hypothetical protein + Term 393574 - 393635 13.1 394 190 Tu 1 . + CDS 393737 - 394408 490 ## COG0036 Pentose-5-phosphate-3-epimerase + Term 394610 - 394646 4.0 395 191 Tu 1 . - CDS 394425 - 395318 486 ## HMPREF0675_4262 hypothetical protein 396 192 Tu 1 . + CDS 395715 - 397352 1173 ## COG2519 tRNA(1-methyladenosine) methyltransferase and related methyltransferases + Term 397388 - 397431 12.0 397 193 Op 1 . - CDS 397427 - 397738 227 ## HMPREF0675_4265 hypothetical protein 398 193 Op 2 . - CDS 397813 - 399999 1636 ## COG1511 Predicted membrane protein 399 193 Op 3 . - CDS 400003 - 400908 621 ## COG0410 ABC-type branched-chain amino acid transport systems, ATPase component 400 193 Op 4 . - CDS 400908 - 401528 438 ## HMPREF0675_4268 transcriptional regulator, TetR family + Prom 401431 - 401490 1.9 401 194 Op 1 3/0.087 + CDS 401675 - 402511 399 ## COG0638 20S proteasome, alpha and beta subunits 402 194 Op 2 . + CDS 402511 - 403188 511 ## COG0638 20S proteasome, alpha and beta subunits 403 194 Op 3 1/0.130 + CDS 403175 - 404272 618 ## COG0287 Prephenate dehydrogenase 404 194 Op 4 7/0.014 + CDS 404335 - 405006 211 ## PROTEIN SUPPORTED gi|15639271|ref|NP_218720.1| bifunctional cytidylate kinase/ribosomal protein S1 405 194 Op 5 . + CDS 405071 - 406441 861 ## COG1160 Predicted GTPases + TRNA 406505 - 406581 88.4 # Pro GGG 0 0 + Prom 406507 - 406566 79.3 406 195 Tu 1 . + CDS 406679 - 407941 809 ## Rxyl_1927 phage integrase 407 196 Tu 1 . - CDS 407884 - 408816 473 ## Closa_0181 Viral replication-associated protein - Prom 408847 - 408906 4.1 - Term 408953 - 408983 -0.7 408 197 Op 1 . - CDS 408988 - 410418 688 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins 409 197 Op 2 . - CDS 410478 - 410813 361 ## gi|313764264|gb|EFS35628.1| hypothetical protein HMPREF9567_01108 - Prom 410979 - 411038 2.3 410 198 Tu 1 . + CDS 410775 - 411437 419 ## gi|314915739|gb|EFS79570.1| conserved domain protein 411 199 Op 1 . - CDS 411967 - 412881 701 ## COG0524 Sugar kinases, ribokinase family 412 199 Op 2 . - CDS 412883 - 413956 502 ## HMPREF0675_4277 hypothetical protein 413 199 Op 3 . - CDS 413943 - 415376 1046 ## COG0738 Fucose permease 414 199 Op 4 2/0.087 - CDS 415373 - 416026 480 ## COG0274 Deoxyribose-phosphate aldolase 415 200 Tu 1 . - CDS 416128 - 417039 424 ## COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain 416 201 Tu 1 . + CDS 417255 - 418103 566 ## COG0561 Predicted hydrolases of the HAD superfamily + Term 418131 - 418161 0.3 417 202 Tu 1 . - CDS 418114 - 419331 609 ## COG0427 Acetyl-CoA hydrolase - Term 419373 - 419426 -0.4 418 203 Tu 1 . - CDS 419438 - 419626 151 ## gi|313807717|gb|EFS46204.1| hypothetical protein HMPREF9580_01546 419 204 Op 1 1/0.130 + CDS 420011 - 420634 306 ## COG0500 SAM-dependent methyltransferases 420 204 Op 2 . + CDS 420631 - 421122 393 ## COG1522 Transcriptional regulators 421 204 Op 3 2/0.087 + CDS 421119 - 422708 674 ## COG0815 Apolipoprotein N-acyltransferase 422 204 Op 4 . + CDS 422689 - 423507 690 ## COG0463 Glycosyltransferases involved in cell wall biogenesis + Term 423539 - 423573 1.5 - Term 423356 - 423395 -0.9 423 205 Tu 1 . - CDS 423562 - 423894 305 ## HMPREF0675_4287 hypothetical protein - Term 423971 - 424030 6.1 424 206 Op 1 . - CDS 424056 - 424781 500 ## COG0584 Glycerophosphoryl diester phosphodiesterase 425 206 Op 2 . - CDS 424847 - 425092 186 ## gi|315105862|gb|EFT77838.1| conserved domain protein 426 207 Tu 1 . + CDS 424980 - 425783 375 ## COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase 427 208 Tu 1 . - CDS 425720 - 427246 1279 ## COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase 428 209 Op 1 . + CDS 427080 - 427385 79 ## gi|282853816|ref|ZP_06263153.1| hypothetical protein HMPREF9206_1749 429 209 Op 2 . + CDS 427396 - 428799 989 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 + Term 428907 - 428942 -0.1 430 210 Op 1 . - CDS 428893 - 429717 507 ## COG1230 Co/Zn/Cd efflux system component 431 210 Op 2 . - CDS 429801 - 430220 249 ## HMPREF0675_4292 transcriptional regulator, ArsR family - Prom 430244 - 430303 1.6 432 211 Tu 1 . - CDS 430435 - 431169 329 ## PPA1230 hypothetical protein - Term 431259 - 431305 18.7 433 212 Op 1 . - CDS 431337 - 432092 774 ## PPA1231 cAMP factor - Prom 432299 - 432358 1.6 434 212 Op 2 . - CDS 432410 - 432838 192 ## COG1186 Protein chain release factor B 435 213 Tu 1 . - CDS 433016 - 434212 953 ## COG0477 Permeases of the major facilitator superfamily 436 214 Tu 1 . + CDS 434768 - 435040 99 ## PPA1234 hypothetical protein + Term 435173 - 435204 3.8 437 215 Tu 1 . + CDS 435346 - 435879 317 ## COG1573 Uracil-DNA glycosylase 438 216 Tu 1 . + CDS 436042 - 436707 455 ## COG2096 Uncharacterized conserved protein 439 217 Tu 1 . - CDS 436708 - 437220 332 ## HMPREF0675_4301 hypothetical protein 440 218 Op 1 42/0.000 - CDS 437334 - 437774 409 ## COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) 441 218 Op 2 42/0.000 - CDS 437780 - 439234 1494 ## COG0055 F0F1-type ATP synthase, beta subunit 442 218 Op 3 42/0.000 - CDS 439246 - 440118 683 ## COG0224 F0F1-type ATP synthase, gamma subunit 443 218 Op 4 41/0.000 - CDS 440194 - 441831 1559 ## COG0056 F0F1-type ATP synthase, alpha subunit 444 218 Op 5 38/0.000 - CDS 441885 - 442676 365 ## COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 445 218 Op 6 . - CDS 442673 - 443227 440 ## COG0711 F0F1-type ATP synthase, subunit b 446 218 Op 7 . - CDS 443238 - 443459 364 ## HMPREF0675_4309 ATP synthase subunit C (EC:3.6.3.14) 447 219 Tu 1 . + CDS 443443 - 443586 76 ## HMPREF0675_4308 hypothetical protein 448 220 Op 1 . - CDS 443550 - 444305 600 ## COG0356 F0F1-type ATP synthase, subunit a 449 220 Op 2 . - CDS 444323 - 444601 252 ## PPA1246 hypothetical protein 450 220 Op 3 . - CDS 444616 - 445110 236 ## PPA1247 putative cyanate permease 451 221 Op 1 4/0.058 - CDS 445267 - 446370 512 ## COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 452 221 Op 2 10/0.000 - CDS 446379 - 447242 706 ## COG0009 Putative translation factor (SUA5) 453 221 Op 3 . - CDS 447235 - 448020 257 ## PROTEIN SUPPORTED gi|107028787|ref|YP_625882.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 454 222 Tu 1 . + CDS 447984 - 448178 69 ## + Term 448346 - 448379 0.2 455 223 Op 1 10/0.000 - CDS 448110 - 449195 396 ## COG0216 Protein chain release factor A 456 223 Op 2 9/0.000 - CDS 449317 - 449526 378 ## PROTEIN SUPPORTED gi|50842732|ref|YP_055959.1| 50S ribosomal protein L31 457 223 Op 3 3/0.087 - CDS 449642 - 451543 1250 ## COG1158 Transcription termination factor - Prom 451612 - 451671 2.8 458 224 Op 1 19/0.000 - CDS 451842 - 452732 622 ## COG0083 Homoserine kinase 459 224 Op 2 11/0.000 - CDS 452743 - 453813 911 ## COG0498 Threonine synthase 460 224 Op 3 3/0.087 - CDS 453816 - 455141 829 ## COG0460 Homoserine dehydrogenase 461 224 Op 4 . - CDS 455212 - 456642 845 ## COG0019 Diaminopimelate decarboxylase - Prom 456781 - 456840 74.0 + TRNA 456764 - 456835 73.2 # Arg CCG 0 0 + Prom 456762 - 456821 74.5 462 225 Tu 1 . + CDS 456890 - 458206 748 ## PPA1260 hypothetical protein + Term 458222 - 458259 -1.0 463 226 Tu 1 . - CDS 458293 - 458460 60 ## + Prom 458208 - 458267 3.2 464 227 Op 1 . + CDS 458396 - 462103 2541 ## COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes 465 227 Op 2 . + CDS 462170 - 462346 169 ## SAV_2975 hypothetical protein 466 228 Tu 1 . - CDS 462401 - 462799 289 ## PPA1263 hypothetical protein + Prom 462915 - 462974 2.2 467 229 Tu 1 . + CDS 463081 - 463332 270 ## PPA1264 transcription factor WhiB3 + Term 463402 - 463428 -0.6 468 230 Tu 1 . - CDS 463362 - 464837 1051 ## COG3920 Signal transduction histidine kinase 469 231 Tu 1 . + CDS 465019 - 465093 83 ## + Term 465163 - 465200 10.8 - Term 465097 - 465134 10.8 470 232 Op 1 . - CDS 465237 - 465497 289 ## HMPREF0675_4330 anti-sigma factor 471 232 Op 2 . - CDS 465500 - 466177 565 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog + Prom 466266 - 466325 2.3 472 233 Tu 1 . + CDS 466401 - 467027 567 ## COG2259 Predicted membrane protein + Term 467128 - 467172 4.2 473 234 Op 1 4/0.058 + CDS 467188 - 468306 540 ## COG0128 5-enolpyruvylshikimate-3-phosphate synthase 474 234 Op 2 . + CDS 468308 - 469309 549 ## COG1162 Predicted GTPases 475 235 Tu 1 . - CDS 469728 - 470540 489 ## COG2939 Carboxypeptidase C (cathepsin A) - Prom 470560 - 470619 3.4 + Prom 470516 - 470575 1.5 476 236 Tu 1 . + CDS 470747 - 471535 555 ## COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family 477 237 Op 1 . - CDS 471579 - 472769 974 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases 478 237 Op 2 1/0.130 - CDS 472816 - 473601 538 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 479 237 Op 3 4/0.058 - CDS 473601 - 474410 430 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 480 237 Op 4 49/0.000 - CDS 474410 - 475222 492 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 481 237 Op 5 38/0.000 - CDS 475219 - 476151 628 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 482 237 Op 6 . - CDS 476193 - 477680 1048 ## COG0747 ABC-type dipeptide transport system, periplasmic component - Prom 477884 - 477943 68.5 + TRNA 477876 - 477952 89.4 # Met CAT 0 0 483 238 Tu 1 . - CDS 477945 - 478157 148 ## 484 239 Tu 1 . + CDS 478723 - 478926 66 ## PPA2384 hypothetical protein + Prom 479476 - 479535 2.0 485 240 Tu 1 . + CDS 479580 - 479960 144 ## PPA2383 hypothetical protein + Term 480030 - 480071 3.6 486 241 Tu 1 . - CDS 480306 - 480719 373 ## PPA1278 hypothetical protein 487 242 Op 1 . - CDS 480920 - 481177 301 ## PPA1279 hypothetical protein 488 242 Op 2 . - CDS 481174 - 481839 531 ## COG1192 ATPases involved in chromosome partitioning - Term 482051 - 482095 4.2 489 243 Tu 1 . - CDS 482132 - 482902 614 ## PPA1281 hypothetical protein - Prom 482948 - 483007 2.5 490 244 Tu 1 . - CDS 483366 - 483605 101 ## PPA1283 hypothetical protein - Term 483988 - 484024 -0.8 491 245 Tu 1 . - CDS 484253 - 485275 734 ## PPA1284 hypothetical protein - Prom 485327 - 485386 2.6 492 246 Tu 1 . - CDS 485448 - 485600 70 ## gi|313807795|gb|EFS46282.1| hypothetical protein HMPREF9580_01626 - Prom 485620 - 485679 3.8 + Prom 485495 - 485554 3.2 493 247 Tu 1 . + CDS 485636 - 485806 130 ## gi|314917982|gb|EFS81813.1| hypothetical protein HMPREF9598_01546 494 248 Op 1 . - CDS 486063 - 487370 241 ## PPA1285 putative biotin carboxylase 495 248 Op 2 . - CDS 487357 - 487878 168 ## PPA1286 putative thioesterase 496 249 Op 1 7/0.014 - CDS 488067 - 489806 321 ## COG1020 Non-ribosomal peptide synthetase modules and related proteins 497 249 Op 2 . - CDS 489829 - 493125 724 ## COG1020 Non-ribosomal peptide synthetase modules and related proteins 498 249 Op 3 . - CDS 493133 - 493906 233 ## COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog - Prom 493934 - 493993 3.9 + Prom 493613 - 493672 3.6 499 250 Tu 1 . + CDS 493859 - 494068 161 ## 500 251 Tu 1 . - CDS 494123 - 495124 345 ## PROTEIN SUPPORTED gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 - Prom 495175 - 495234 5.0 - Term 495323 - 495363 -0.8 501 252 Op 1 . - CDS 495416 - 495547 61 ## 502 252 Op 2 . - CDS 495584 - 495829 110 ## gi|327454166|gb|EGF00821.1| conserved domain protein 503 253 Tu 1 . - CDS 496235 - 496936 189 ## PPA1292 putative transcriptional regulator - Prom 497054 - 497113 5.0 504 254 Tu 1 . - CDS 497349 - 497480 72 ## gi|328905670|gb|EGG25448.1| hypothetical protein PA08_2737 505 255 Tu 1 . - CDS 497853 - 498224 260 ## PPA1293 putative ribonuclease E 506 256 Op 1 . - CDS 498642 - 500348 1468 ## PPA1294 hypothetical protein 507 256 Op 2 . - CDS 500345 - 500866 426 ## PPA1295 hypothetical protein 508 256 Op 3 . - CDS 500936 - 501496 205 ## PPA1296 putative permease 509 256 Op 4 . - CDS 501493 - 502137 300 ## PPA1297 hypothetical protein 510 257 Op 1 . + CDS 501869 - 502384 226 ## PPA1298 hypothetical protein 511 257 Op 2 . + CDS 502401 - 502982 421 ## PPA1299 hypothetical protein 512 257 Op 3 . + CDS 502997 - 503542 451 ## PPA1300 hypothetical protein 513 258 Op 1 . - CDS 503650 - 503955 159 ## gi|289425057|ref|ZP_06426834.1| hypothetical protein HMPREF1034_0478 514 258 Op 2 . - CDS 503952 - 504269 246 ## gi|282853735|ref|ZP_06263072.1| hypothetical protein HMPREF9206_1666 515 259 Tu 1 . - CDS 504371 - 504577 144 ## PPA1303 hypothetical protein - Term 504609 - 504645 1.5 516 260 Tu 1 . - CDS 504678 - 505067 147 ## PPA1304 hypothetical protein 517 261 Tu 1 . + CDS 505244 - 505402 112 ## HMPREF0675_4344 hypothetical protein + Prom 505420 - 505479 1.6 518 262 Tu 1 . + CDS 505543 - 505905 216 ## PPA1305 hypothetical protein 519 263 Tu 1 . - CDS 506139 - 506354 126 ## PPA1306 hypothetical protein 520 264 Tu 1 . + CDS 506336 - 506821 178 ## PPA1307 hypothetical protein - Term 507097 - 507130 1.0 521 265 Op 1 . - CDS 507211 - 507801 244 ## PPA1308 putative universal stress protein UspA 522 265 Op 2 . - CDS 507872 - 508414 274 ## PPA1309 hypothetical protein 523 265 Op 3 . - CDS 508432 - 509571 575 ## COG3480 Predicted secreted protein containing a PDZ domain + Prom 509578 - 509637 1.7 524 266 Tu 1 . + CDS 509667 - 511028 869 ## COG5282 Uncharacterized conserved protein + Term 511042 - 511073 0.9 525 267 Tu 1 . - CDS 511016 - 511642 164 ## COG1451 Predicted metal-dependent hydrolase + Prom 511675 - 511734 2.5 526 268 Tu 1 . + CDS 511868 - 512122 162 ## 527 269 Tu 1 . - CDS 512104 - 512358 194 ## HMPREF0675_4353 hypothetical protein - Prom 512515 - 512574 2.4 528 270 Tu 1 . + CDS 512458 - 512727 147 ## PPA1313 hypothetical protein 529 271 Tu 1 . - CDS 512673 - 514793 1110 ## COG0210 Superfamily I DNA and RNA helicases + Prom 514817 - 514876 1.7 530 272 Op 1 8/0.000 + CDS 514918 - 518067 660 ## COG1330 Exonuclease V gamma subunit 531 272 Op 2 13/0.000 + CDS 518064 - 521300 892 ## COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) 532 272 Op 3 . + CDS 521293 - 523179 662 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 533 273 Op 1 1/0.130 - CDS 523210 - 524112 296 ## COG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding 534 273 Op 2 5/0.043 - CDS 524149 - 527367 1448 ## COG0210 Superfamily I DNA and RNA helicases 535 273 Op 3 . - CDS 527364 - 530549 698 ## COG0210 Superfamily I DNA and RNA helicases 536 273 Op 4 . - CDS 530619 - 530795 65 ## PPA1321 hypothetical protein 537 274 Op 1 . + CDS 530817 - 531674 494 ## COG0631 Serine/threonine protein phosphatase 538 274 Op 2 . + CDS 531696 - 531923 271 ## HMPREF0675_4362 hypothetical protein 539 275 Tu 1 . - CDS 531964 - 532530 391 ## HMPREF0675_4363 hypothetical protein 540 276 Tu 1 . + CDS 532661 - 534355 980 ## COG0513 Superfamily II DNA and RNA helicases 541 277 Tu 1 . + CDS 534497 - 536005 931 ## COG1113 Gamma-aminobutyrate permease and related permeases - Term 535949 - 535993 1.0 542 278 Tu 1 . - CDS 536069 - 537160 1036 ## COG0180 Tryptophanyl-tRNA synthetase 543 279 Op 1 . - CDS 537307 - 538167 300 ## COG0613 Predicted metal-dependent phosphoesterases (PHP family) 544 279 Op 2 . - CDS 538164 - 542774 2341 ## COG2902 NAD-specific glutamate dehydrogenase + Prom 542664 - 542723 2.1 545 280 Tu 1 . + CDS 542926 - 543399 350 ## HMPREF0675_4369 hypothetical protein - Term 543306 - 543340 -0.5 546 281 Tu 1 . - CDS 543432 - 543965 306 ## HMPREF0675_4370 hypothetical protein 547 282 Tu 1 . + CDS 543780 - 544634 151 ## PPA1332 hypothetical protein + Term 544732 - 544772 3.3 - Term 544626 - 544671 12.5 548 283 Tu 1 . - CDS 544677 - 547382 2198 ## COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) - Prom 547628 - 547687 75.6 - Term 547575 - 547614 2.9 549 284 Tu 1 . - CDS 547733 - 548344 425 ## PROTEIN SUPPORTED gi|119715673|ref|YP_922638.1| sigma 54 modulation protein / SSU ribosomal protein S30P 550 285 Tu 1 . + CDS 548184 - 548519 74 ## gi|313771849|gb|EFS37815.1| hypothetical protein HMPREF9574_01761 551 286 Op 1 . - CDS 548563 - 549210 158 ## HMPREF0675_4374 hypothetical protein 552 286 Op 2 . - CDS 549252 - 550928 557 ## HMPREF0675_4375 putative lipoprotein LpqB - Term 550972 - 551010 1.0 553 287 Op 1 40/0.000 - CDS 551025 - 552503 1007 ## COG0642 Signal transduction histidine kinase - Term 552525 - 552572 3.5 554 287 Op 2 . - CDS 552620 - 553330 588 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 555 287 Op 3 . - CDS 553395 - 553973 349 ## COG1678 Putative transcriptional regulator - Term 554389 - 554434 13.5 556 288 Tu 1 . - CDS 554473 - 555330 876 ## HMPREF0675_4379 hypothetical protein - Prom 555496 - 555555 4.2 557 289 Op 1 . + CDS 555447 - 555788 173 ## PPA2385 hypothetical protein 558 289 Op 2 . + CDS 555796 - 556113 170 ## PPA2386 hypothetical protein 559 290 Op 1 . + CDS 557516 - 557767 211 ## COG4283 Uncharacterized conserved protein 560 290 Op 2 . + CDS 557706 - 558044 216 ## COG4283 Uncharacterized conserved protein 561 291 Tu 1 . - CDS 558341 - 558619 109 ## gi|313801542|gb|EFS42787.1| conserved domain protein 562 292 Tu 1 . + CDS 558754 - 558978 124 ## PPA2388 hypothetical protein 563 293 Op 1 . - CDS 559130 - 559270 175 ## BBPR_0959 hypothetical protein 564 293 Op 2 . - CDS 559274 - 559528 207 ## HMPREF0675_4387 hypothetical protein - Prom 559714 - 559773 4.6 - Term 560112 - 560166 8.9 565 294 Op 1 . - CDS 560403 - 561005 398 ## HMPREF0675_4389 hypothetical protein 566 294 Op 2 . - CDS 561104 - 561628 297 ## PPA1345 hypothetical protein 567 294 Op 3 . - CDS 561625 - 563085 994 ## COG0165 Argininosuccinate lyase - Prom 563105 - 563164 2.6 568 295 Op 1 13/0.000 - CDS 563173 - 564369 637 ## COG4992 Ornithine/acetylornithine aminotransferase 569 295 Op 2 10/0.000 - CDS 564380 - 565312 834 ## COG0548 Acetylglutamate kinase 570 295 Op 3 11/0.000 - CDS 565309 - 566475 865 ## COG1364 N-acetylglutamate synthase (N-acetylornithine aminotransferase) 571 295 Op 4 . - CDS 566487 - 567536 601 ## COG0002 Acetylglutamate semialdehyde dehydrogenase - Term 567587 - 567631 8.4 572 296 Op 1 4/0.058 - CDS 567641 - 568123 606 ## COG0691 tmRNA-binding protein 573 296 Op 2 28/0.000 - CDS 568169 - 569071 775 ## COG2177 Cell division protein 574 296 Op 3 4/0.058 - CDS 569105 - 569830 314 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 575 296 Op 4 . - CDS 569803 - 570906 942 ## COG1186 Protein chain release factor B - Prom 571024 - 571083 76.3 + TRNA 571007 - 571080 83.1 # Val TAC 0 0 + Prom 571008 - 571067 77.8 576 297 Tu 1 . + CDS 571220 - 571930 548 ## COG3152 Predicted membrane protein - Term 571886 - 571925 -0.6 577 298 Tu 1 . - CDS 571992 - 574358 1639 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins 578 299 Tu 1 . + CDS 574378 - 574668 161 ## gi|313764087|gb|EFS35451.1| hypothetical protein HMPREF9567_00927 579 300 Tu 1 . - CDS 574683 - 575645 602 ## COG0611 Thiamine monophosphate kinase - Prom 575691 - 575750 2.1 580 301 Tu 1 . + CDS 575823 - 576143 206 ## HMPREF0675_4404 hypothetical protein 581 302 Op 1 . - CDS 576156 - 577253 819 ## COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes 582 302 Op 2 . - CDS 577302 - 578078 414 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase 583 302 Op 3 30/0.000 - CDS 578178 - 578570 283 ## COG0066 3-isopropylmalate dehydratase small subunit 584 302 Op 4 . - CDS 578579 - 578986 351 ## COG0065 3-isopropylmalate dehydratase large subunit 585 302 Op 5 . - CDS 579014 - 579349 265 ## COG0065 3-isopropylmalate dehydratase large subunit - Prom 579523 - 579582 2.9 586 303 Tu 1 . + CDS 579573 - 580292 474 ## COG1414 Transcriptional regulator + Term 580498 - 580542 1.5 - TRNA 580416 - 580491 73.8 # Glu CTC 0 0 587 304 Op 1 . - CDS 580593 - 580841 82 ## - TRNA 580628 - 580699 57.3 # Gln CTG 0 0 588 304 Op 2 . - CDS 580793 - 581737 776 ## PPA1365 hypothetical protein 589 304 Op 3 . - CDS 581737 - 582537 642 ## COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 590 305 Tu 1 . + CDS 582618 - 583907 1122 ## COG0213 Thymidine phosphorylase - Term 583901 - 583935 6.1 591 306 Tu 1 . - CDS 583947 - 585038 754 ## COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase - Prom 585261 - 585320 2.0 592 307 Op 1 . + CDS 585126 - 585506 151 ## COG0473 Isocitrate/isopropylmalate dehydrogenase 593 307 Op 2 . + CDS 585440 - 585919 328 ## COG0473 Isocitrate/isopropylmalate dehydrogenase 594 308 Tu 1 . + CDS 586046 - 586564 311 ## COG4122 Predicted O-methyltransferase - Term 586569 - 586618 13.4 595 309 Op 1 15/0.000 - CDS 586631 - 587659 1123 ## COG0059 Ketol-acid reductoisomerase 596 309 Op 2 32/0.000 - CDS 587836 - 588081 297 ## COG0440 Acetolactate synthase, small (regulatory) subunit 597 309 Op 3 . - CDS 588132 - 588359 141 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 598 310 Op 1 . - CDS 588767 - 589177 343 ## COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 599 310 Op 2 . - CDS 589222 - 589983 513 ## COG0107 Imidazoleglycerol-phosphate synthase 600 310 Op 3 4/0.058 - CDS 590033 - 592786 1593 ## COG4581 Superfamily II RNA helicase 601 311 Op 1 . - CDS 592968 - 593837 693 ## COG0805 Sec-independent protein secretion pathway component TatC 602 311 Op 2 . - CDS 593841 - 594074 365 ## PPA1379 hypothetical protein 603 311 Op 3 . - CDS 594169 - 594372 205 ## HMPREF0675_4429 hypothetical protein 604 311 Op 4 4/0.058 - CDS 594372 - 595340 832 ## COG2378 Predicted transcriptional regulator 605 311 Op 5 . - CDS 595337 - 596299 749 ## COG2378 Predicted transcriptional regulator 606 312 Tu 1 . + CDS 596387 - 597388 406 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases 607 313 Op 1 . - CDS 597431 - 598504 871 ## COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 608 313 Op 2 . - CDS 598515 - 599252 733 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 609 313 Op 3 . - CDS 599270 - 599635 249 ## HMPREF0675_4435 hypothetical protein 610 313 Op 4 1/0.130 - CDS 599620 - 600537 950 ## COG1192 ATPases involved in chromosome partitioning 611 313 Op 5 3/0.087 - CDS 600629 - 601549 494 ## COG4974 Site-specific recombinase XerD 612 313 Op 6 3/0.087 - CDS 601546 - 602205 343 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 613 313 Op 7 . - CDS 602202 - 603890 1601 ## COG0504 CTP synthase (UTP-ammonia lyase) 614 314 Tu 1 . - CDS 604063 - 604272 104 ## PPA1391 hypothetical protein 615 315 Tu 1 . + CDS 604208 - 604441 121 ## 616 316 Op 1 . - CDS 604419 - 604640 180 ## PPA1393 hypothetical protein 617 316 Op 2 17/0.000 - CDS 604656 - 606335 977 ## COG0497 ATPase involved in DNA repair 618 316 Op 3 5/0.043 - CDS 606332 - 607288 274 ## COG0061 Predicted sugar kinase 619 316 Op 4 . - CDS 607307 - 608083 463 ## COG1189 Predicted rRNA methylase 620 317 Op 1 34/0.000 - CDS 608367 - 608987 467 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 621 317 Op 2 7/0.014 - CDS 608984 - 609652 235 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 622 317 Op 3 . - CDS 609733 - 610302 520 ## COG1268 Uncharacterized conserved protein - Term 610317 - 610351 2.0 623 318 Op 1 . - CDS 610373 - 611371 611 ## COG0647 Predicted sugar phosphatases of the HAD superfamily 624 318 Op 2 . - CDS 611368 - 612546 508 ## HMPREF0675_4452 tetratricopeptide repeat protein - Prom 612690 - 612749 2.7 Predicted protein(s) >gi|302034487|gb|GL383264.1| GENE 1 99 - 1307 1338 402 aa, chain + ## HITS:1 COG:Cgl1549 KEGG:ns NR:ns ## COG: Cgl1549 COG0126 # Protein_GI_number: 19552799 # Func_class: G Carbohydrate transport and metabolism # Function: 3-phosphoglycerate kinase # Organism: Corynebacterium glutamicum # 1 400 3 405 405 363 51.0 1e-100 MKSVEDLGDLRGKRVVIRCDFNVPLDGDKITDDGRIKAALPTLTQLHEAGARTTVLAHLG RPKGAVDPKYSLAPVAKRLGELMNLDVKLAGDVVGPSATKTSESLADGEIALVENVRFEK GETSKDEAERAELAQKYASFGEFYVSNGFGVVHRKQASVYDVAKLLPSAAGSLVAKEVEV LEGLTADPKRPFVVVLGGAKVADKLAVIDNLLKAADTLVIGGGMAYTFLKAKGLEVGDSL LDEDSIDACTKYLEQAKAAGKQILLPVDVRVVSDIDFEARTVGQIDVVPADEIPSDKMAV DIGPETEKAYANAIKGAKSVFWNGPMGVFEIKGLELGTKAVAQALTEVDGLSVVGGGDSA SAVRTLGFADDQFGHISTGGGASLELMEGKKLPGIAVLKENN >gi|302034487|gb|GL383264.1| GENE 2 1307 - 2086 836 259 aa, chain + ## HITS:1 COG:MT1482 KEGG:ns NR:ns ## COG: MT1482 COG0149 # Protein_GI_number: 15840896 # Func_class: G Carbohydrate transport and metabolism # Function: Triosephosphate isomerase # Organism: Mycobacterium tuberculosis CDC1551 # 1 253 1 251 261 277 57.0 1e-74 MSRTPIMAGNWKMNLDHVAATSLVQDLGEALKAAGYDSSKSEAVVIPPFTDIRPVAIIID GDKLPIAYGAQDISAHDDGAYTGEVSGAMLSKLGCRYVVVGHSERREYHNESDELVNAKA KKVIENGMTPIICCGEALEVRKAGKHVEHTVGQIKADLDGISAEQVAKLVIAYEPIWAIG TGETATADDAQEVCQAIREAVKELYDAPTAEAVRIQYGGSVKPANVAEIMAKPDVDGALV GGASLKAGDFSKIVTFYEA >gi|302034487|gb|GL383264.1| GENE 3 2187 - 2486 321 99 aa, chain + ## HITS:1 COG:Rv1440 KEGG:ns NR:ns ## COG: Rv1440 COG1314 # Protein_GI_number: 15608578 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecG # Organism: Mycobacterium tuberculosis H37Rv # 20 98 36 116 117 59 50.0 1e-09 MWGSGGTWVTLYDVISAPLTTWPVLTMSIILCVLSVILTLFVLLHKSKGGGLSDLFGGGV STSMGGTSMAERNLDRLTIVMGLLWLASIIVLLVLYSHS >gi|302034487|gb|GL383264.1| GENE 4 2604 - 2960 395 118 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3885 NR:ns ## KEGG: HMPREF0675_3885 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 118 1 118 118 184 100.0 7e-46 MSGGSAIRGSRVGAGPMGEAERGEAAPREYVSYFCANHHVIRPAFAAEAEIPDTWECPRC GLPANRDQANPPAPPKIVPYKTHLAYVKERRSEAEAAAILAEALENLRQRRRDGEVIY >gi|302034487|gb|GL383264.1| GENE 5 2957 - 4402 1042 481 aa, chain + ## HITS:1 COG:ML1471 KEGG:ns NR:ns ## COG: ML1471 COG0285 # Protein_GI_number: 15827773 # Func_class: H Coenzyme transport and metabolism # Function: Folylpolyglutamate synthase # Organism: Mycobacterium leprae # 11 437 35 483 485 306 44.0 8e-83 MSSHNQLVAELTARWPEHRIGPGLDRERAVLDLLGNPQQACPVIQIAGTNGKGSTAIMVD SLLRSAGLRVGRYCSPHLVDVTERICIDGRPVSHDLFDETWRQVEPMVGLVDAQHIDGIE MTFFEVMTAMAFAAFADAPVDVAVVEVGLGGRWDATNVADVNIAVVTPVAMDHMHILGDS LDKIAAEKAGIIKPGCTPVIAGQEAEAAPVLLAQCADAGVKPLLEGPDWGLLDRRSAIGG QVLRIQTASGPLGELFLPVFGEHMAHNAAQAVAAVEALTGPLKPAIIEQGLAAVQAPARL EVVRRSPLVILDTFHNPHGAASAIAGVRESFEVEPLIAVVAAMADKDVDGVLAVLSDTVS YLVVTSMPDLPRALSVDELADKASAHWDYDHLTRVTDVPEALEEAFRIADSCGPGAGVLI AGSVVLAGRARAILRPDGTMLDAPQTAIVETPDLSEDQVKAMEGHQLEPLPDDDMSDDGG W >gi|302034487|gb|GL383264.1| GENE 6 4465 - 4785 348 106 aa, chain + ## HITS:1 COG:no KEGG:PPA0822 NR:ns ## KEGG: PPA0822 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 105 23 127 128 137 98.0 2e-31 MTKVVVGFLAFEVIVFGLAIPGMILVSGVSVVMSIILGCVGMVVSIVCAIGVPRTWGYLL SWTLQIFGILLGLATPMMYVVGIIFAAIWVSIMVLGKRIDGSPEVR >gi|302034487|gb|GL383264.1| GENE 7 4819 - 5235 424 138 aa, chain + ## HITS:1 COG:MT2521 KEGG:ns NR:ns ## COG: MT2521 COG0105 # Protein_GI_number: 15841969 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside diphosphate kinase # Organism: Mycobacterium tuberculosis CDC1551 # 5 135 3 134 136 158 58.0 3e-39 MNDEERTLVLLKPDAVKRRLMGEIIGRYEAKGLTVRAMELSTIDAKTARKHYAEHVGRDY YAALEEFITSGPLVAMVLEGRRVISVVRAMNGATDCAEALPGTIRGDFGTEKNHNLVHAS DCLESAEREIGLWFPHLV >gi|302034487|gb|GL383264.1| GENE 8 5281 - 7233 1224 650 aa, chain + ## HITS:1 COG:CAC1254 KEGG:ns NR:ns ## COG: CAC1254 COG1032 # Protein_GI_number: 15894536 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Clostridium acetobutylicum # 10 617 5 603 622 520 42.0 1e-147 MNTQDLLGRIEPLLSRVNKPIQYVGGEHNSIVKEWQDVDVRWVLMYPDAYEVGQPNQGVA ILYEVLNERDWILAERTYSVWPDMEKQMRAAGIPQFTLDGHRPVRDFDIMSVSLSTELGY TNMLNAIDLAGIPVRQADRTDTDPIVLIGGHAAFNPEPVADFIDAAVLGDGEEACLEISE IIRDWKKEGCPGGREGLLVRLAATGGIYVPCFYDVEYLDDGTIGKVAPNRLEAPYTVSKH TVMDLDEWQYPKRPIVPVAETVHERYSVEIFRGCTRGCRFCQAGMITRPVRERSIDAIAQ MVDGGLQATGLEEVGLLSLSSADHSEISDITKGLADRYEGTNVSLSLPSTRVDTFNIDLA NELSRNGRRSGLTFAPEGGSERMRRVINKKVTEEDLIRTVATAFGNGWRQIKLYFMCGLP TETDEDVLGIHDMASHVVAAGRAAAGRKDIRCTISIGGFVPKPHTPFQWAAQASADEVDH RLSVLRDSIRADRQFGRSIGMRYHDGRPGIIEGLLSRGDRRVGNVIEAVWRDGGVFDGWN EYFSYDRWVACCERELEPLGVSLDWFTTRERDYEEVLPWDHLDSGLDRDWLWDDWQDALD GEAVNDCRWNPCYDCGVCPQMGTEIQVGPSGHPLIPLTPVVPDLAPSKEA >gi|302034487|gb|GL383264.1| GENE 9 7236 - 7970 482 244 aa, chain + ## HITS:1 COG:sll1084_2 KEGG:ns NR:ns ## COG: sll1084_2 COG5011 # Protein_GI_number: 16329879 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Synechocystis # 18 176 1 166 222 81 30.0 1e-15 MSKRAQQQPEQQAPPQQRLRIRYAKRGTARFTSHRDFARAFERALNRAHIPMAYSSGFSP HPRISYANAAATGAASEAEYLEVALAEVCDPQKVLTVLGREMPPGMEVLEVAETDRTPFA ELLTASAWLIEPTGDVPGLAEAVEAVMTAETVDVQRMTKSGVRTFDVRAALIGLDVANGC VRLMLRHVTPLVRPDDVLRALAKRCPAVDAARVTRLAQGACNEDASGVSTALADPFTGAA VTVW >gi|302034487|gb|GL383264.1| GENE 10 8243 - 10867 1921 874 aa, chain + ## HITS:1 COG:ML1468 KEGG:ns NR:ns ## COG: ML1468 COG1530 # Protein_GI_number: 15827770 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonucleases G and E # Organism: Mycobacterium leprae # 309 858 173 764 924 515 56.0 1e-145 MLDETDNTTLNSGGNSTSGIPAPRRRRAASRPAGAPAPVETMGTPVAIAAAGSGGSIVTS DVEVSDLPRPPMGRRRKATSTPRDVKTDVPKVVALEPTPEEPESADTRTEEKPRRTRRGA SETAPSTEAERGTSQRRRATRRRSSRTAEKVEETTEATTATNKGDGADDDPINVALTEAK ARARNHKVEGALANPFGFKEGEERSASDILDSLAVEIGGGEAAMPKRRRRRATRPSEAGS HSAETSGSTDKVAPVEEDKGEVKDRHSSDKKSEKSDYDTTDAVEETAADTEEDGQNRRRR RRGGRRRRRSEDTEDSASEDESSDSDDSQTSSDNDSESSSSDATHRRRRRRRRRGEDISG SDDDPSDVVIKVREPRSRQSVADEVTGIEGSTRVEAKKQRRREGRAAGRRRSAVITDAEF LARRESVDRKMIVRQSDDYSQLAVLEDGVLVEHYVDRASATSSIGNIYLGKVQNVLPSME AAFIDIGRGRNAVLYAGEVDWAKYGKEGEDKRIEHVLKSGDQVLVQVTKDPVGAKGARLT SHISVPGRFVVYSPGGHLSGISRKLADSERKRLKKIVENNIPSDASVIVRTAAEGATEED LVRDINRLKVQWEVIERKVSNSKAPLMLYTEPDLTVRIIRDLFTADFSELVIAGNGGPDD AYDTIKAYVDHVAPEMTSRLIHWEHTDKDPFAEYRIDEQVAKALERKVYLPSGGSLVIDR TEAMTVIDVNTGKFTGSAGNLEATVTANNLEAAEEIVRQLRLRDIGGIIVIDFIDMVLPT NRELLVRRLTECLGRDRTRHQVAEVTSLGLVQMTRKKIGTGLAEAFTEQCEACGGRGYRR FDKPVDSQAPADGGERSKGRGRGHKGSSGKSHSK >gi|302034487|gb|GL383264.1| GENE 11 10998 - 11336 506 112 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|213959551|ref|ZP_03387834.1| ribosomal protein L21 [Propionibacterium acnes SK137] # 11 112 1 102 102 199 99 2e-49 MYDKNESRSGVYAIVRSGGRQHKVAVGDVVEIDKVADEAGSSIELTPLLVVDGESVTSDK DALGKVKVTAEVLGETKGPKIRILKYKNKTGYKKRQGHRQKYTQVKVTGIEG >gi|302034487|gb|GL383264.1| GENE 12 11348 - 11617 462 89 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50842315|ref|YP_055542.1| 50S ribosomal protein L27 [Propionibacterium acnes KPA171202] # 1 89 1 89 89 182 100 2e-44 MAHKKGASSSRNGRDSNAQRLGVKRFGGQLVNAGEIIVRQRGTHFHPGDGVGRGGDDTLF ALRDGNVEFGTRRGRRVVNVTPVEAPVEA >gi|302034487|gb|GL383264.1| GENE 13 12159 - 12467 114 102 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3894 NR:ns ## KEGG: HMPREF0675_3894 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 102 125 226 226 142 100.0 4e-33 MIGAAVTSLVIALGGALFTRWFSRTDRSVSGAHQRRGMWARMVAVALVVSVLTVVVGVVW LAPSAGREAGWWVHRATGSLEQWRESAQRAWPYLRKAWNAFR >gi|302034487|gb|GL383264.1| GENE 14 12568 - 13176 396 202 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3895 NR:ns ## KEGG: HMPREF0675_3895 # Name: not_defined # Def: transcriptional regulator, TetR family # Organism: P.acnes_SK137 # Pathway: not_defined # 1 202 1 202 202 350 100.0 2e-95 MASPTAIRTQGVIRRAAIELAIEKPVDDVTVDDIAERAGVSRRTVFNHFPSKYDVYLPPL VTYPQEVLDAFATDVETPLATLIRDLLEARWRATNVDFDDLCILMKIGRESSELRMAFKE AVEGQRAALVAASARRTGKSEDSLEVLALVGTVQAMERCAVQSVVARPGGSSAEVADTFD RVVDVWARLSAELSADMSSTKP >gi|302034487|gb|GL383264.1| GENE 15 13214 - 15034 1536 606 aa, chain + ## HITS:1 COG:Cgl0376 KEGG:ns NR:ns ## COG: Cgl0376 COG0477 # Protein_GI_number: 19551626 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Corynebacterium glutamicum # 54 529 65 541 549 391 45.0 1e-108 MRAFERAIPSVSDRYESCYMTATAAAAVKFRPDRRFWVVYFCLMMVMFLSSLDQTIVATA LPTIVGDLSGVEHMAWVITAYTLAITVGMPLYGRLSDLIGRKTLYLIAIGLFLLGSALCG TAGAMITFIFYRFIQGLGGGGLMILSQAITGDLIPPRVRAAYMAPMGAMFGVSSVLGPLL GGWLTDSISWRWVFWINLPLGVVAWIACLFALKLPKHELAAKIDWLGLTLMDAGAVAIVL LATWGGSQYDWLSWQIIGLGVITVVAWGLLPFVERRIEDPVLPLELFRNRTFVVSTIIGM LAMGAMFGVLAYLPTYMQMTYGYSATVSGLLLIPMTIGILLASTVTGLLTSRIGRYRIFI IIGPIVAAGGMVLMSTLNENSPVWRIMGDTFVLGLGMGMFFQLLVMAVQNDVRPTLLGTA TSHNNFFRQIGVCLGASLIGVAFTTRLTNRVTDLFTSLAASKNPAVLKALGAMSSHHAAA SLTPGAVNQMPDFIRNGIIEAYVNSLTPLFLWMAPMVAAAGLLAFLLKDVPLSHHTGLQM RAASEAEMEGAQEVPAVEGRENLSENGHGDFSDDLAGSSARRATDVTKVKPTPPRHSAGS NQPGQA >gi|302034487|gb|GL383264.1| GENE 16 15137 - 16654 1264 505 aa, chain + ## HITS:1 COG:MT2516 KEGG:ns NR:ns ## COG: MT2516 COG0536 # Protein_GI_number: 15841962 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Mycobacterium tuberculosis CDC1551 # 2 474 5 479 484 448 57.0 1e-126 MAIPSFVDRATLTAVAGKGGHGCASVKREKFKPLGGPDGGNGGHGGSVILRVDPQVTTLV DYHWQSTRKATNGESGRGDNQAGANGSDMILAVPEGTVVSDADTGELLGDLVGVGAELVV AAGGRGGLGNAALANSARKAPGFALLGEAGEERKILLELKVVADIGLVGFPSAGKSSLIA AISRAKPKIADYPFTTLVPNLGVVVAGETTYTVADVPGLIPGASVGKGLGFDFLRHIERC RAIVHVIDCATYEPGRDPVSDLDVIEGELIAHGGLEDRPRLVVLNKVDVPDAADLADIIF DDVAERGWPVFRVSTKSGEGLNSLKFAMAELVEKARDNEPEPEPERIVIRPEPKNERQAF SIKRQGDGEGGFLWRVTGDKPTRWVAQTDFNNPEAVGYLSDRLNRLGVEEELLAVGAIAG DAVAVGGEDAVIFDFAPQIESGAELLSRRGEDQRLKSERPSATRRREMDREYHRAREEYG QVGRDLRGESWRARVAEEEWFEGRD >gi|302034487|gb|GL383264.1| GENE 17 16647 - 17822 455 391 aa, chain + ## HITS:1 COG:slr2035 KEGG:ns NR:ns ## COG: slr2035 COG0263 # Protein_GI_number: 16329688 # Func_class: E Amino acid transport and metabolism # Function: Glutamate 5-kinase # Organism: Synechocystis # 13 369 9 372 375 257 44.0 3e-68 MTDQRGAICGAATLVVKVGSSSLTLPGGGIDVRRVDDLVDALSEVIAVGRRVVLVSSGAI ATGFPAMGITHRPRTLAGKQAAASVGQGILLAHYASRFASHGLRVGQVLLTVNDLVRPTS YRNAWSTLDTLLGLGVVPIVNENDTVATGEIRFGDNDRLAALVAELVRAQALILLSDVDA LYTAHPDSPDARRVEVVEDIDTLDVDTHKAGSGVGTGGMTTKLEAARMATCAGVPVVLAA AVDAPDVLAGAPVGTYFRPLATRRPRRLLWLADAATPQGQIVIDDGAVEALTQRHSSLLA VGVTRVHGDFQAGDPVTILASDGRVVGRGIAQFSHDEVRVMRGRSSAWLAAEMGPAASRE IIHRDAMVLSRRRKAEPSSRNQKSSGSRVTS >gi|302034487|gb|GL383264.1| GENE 18 17877 - 19118 836 413 aa, chain + ## HITS:1 COG:CAC3254 KEGG:ns NR:ns ## COG: CAC3254 COG0014 # Protein_GI_number: 15896499 # Func_class: E Amino acid transport and metabolism # Function: Gamma-glutamyl phosphate reductase # Organism: Clostridium acetobutylicum # 5 412 7 417 418 357 46.0 2e-98 MSSRVIEQAIAARSAATVLRRLRRIDKDDLLAAMGIGLRKGVDEILAANGADVDRGRDAG MDEALLDRLTLTPERIEGMAVGLEGVAHLDDSVGEVVRGWHTPLGVKVEQVRVPIGVIGI IYEARPNVTSDAAGICLKSGNACLLRGSSSALESNRAVIAAMRSRLPEEIREAVQLVEGG HEVTDELMTARGYVDLLIPRGGAGLINAVVTGAKVPVIQTGTGNCHLVIDVSADVEMAVN IAVNAKTQRPSVCNAIETVLVHRGIADSAVRPLVDAMSERGVTVHGDEESIRLDPRIVPA APDEYDNEYLSLDLALRIVDDLEEAVDHIAKHGSGHSETIVTKSMSSQEFFASSVDAAAV LVNCSSRFVDGGEFGFGAEIGISTQKLHARGPMGLREMTTTTYVLRGDGQTRP >gi|302034487|gb|GL383264.1| GENE 19 19166 - 19288 67 40 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSIVPLLMESSALVVGILTLLVLLIALAIVRGIGKGRPHS >gi|302034487|gb|GL383264.1| GENE 20 19288 - 19956 476 222 aa, chain + ## HITS:1 COG:Cgl2301 KEGG:ns NR:ns ## COG: Cgl2301 COG1057 # Protein_GI_number: 19553551 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid mononucleotide adenylyltransferase # Organism: Corynebacterium glutamicum # 15 216 7 208 218 276 66.0 3e-74 MPSVELGLARVHNGRRYRLGVMGGTFDPIHHGHLVAASEVAARFDLDEVVFVPTGVPWQK KGRRVSQAEDRYLMTVIATASNPSFSVSRVDIDRPGDTYTVDTLKDLRRERGSDVDLFFI TGADALSQILTWRGADELFDLAHFIGVSRPGVPLGTKDISHLPAEKVTLLEVPAMAISST DCRQRVSEDMPIWYLVPDGIVQYINKRGLYRDNNDKTTPEDH >gi|302034487|gb|GL383264.1| GENE 21 19953 - 20357 246 134 aa, chain + ## HITS:1 COG:ML1453 KEGG:ns NR:ns ## COG: ML1453 COG0799 # Protein_GI_number: 15827762 # Func_class: S Function unknown # Function: Uncharacterized homolog of plant Iojap protein # Organism: Mycobacterium leprae # 1 111 1 112 129 112 57.0 2e-25 MSATEYAIELARVVAYAALDKKGFDIVALDVSEHLAITDIFVVISAANERQVSAVVDAVD KAMHEHKAHRARREGERENRWVLLDYIDIVVHVQHQEERELYSLERLWKDCPSVDLRLPE DEMSVPTDVGTDAQ >gi|302034487|gb|GL383264.1| GENE 22 20438 - 21025 319 195 aa, chain + ## HITS:1 COG:alr1107 KEGG:ns NR:ns ## COG: alr1107 COG0406 # Protein_GI_number: 17228602 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Nostoc sp. PCC 7120 # 7 158 33 185 212 73 30.0 2e-13 MPLDEVGRRQAFTVAQVIAAMEPDAIIASPLQRARDTAQAIGACAGLGVQLDDRLIEIDV GRWSGQRAADLRRNDPEYAAGVVSPIDYRRADGETASEVADRIVAVCQDVVAQYAGGTII LVAHGFALRTGICWLLGGDYGASRCLGGLDNCSWSIVDHLPEDVVEARGFLSPWRLMAYN CGVPVPVDVDFAKGA >gi|302034487|gb|GL383264.1| GENE 23 21204 - 22013 290 269 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3905 NR:ns ## KEGG: HMPREF0675_3905 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 269 226 494 494 471 99.0 1e-131 MQFIQAAHHSADPNLPPTRVVVHATCPDVGFPSASRAGRAVGTAGYLASISASGSAHYVC DATETVQYLGEDVIGWLAPPNGHSIGIEICADGGSRASFNNPSHAYSPKQWLSPQVWLAV EKAAHLTRQICHRYAIPMRRLTVAGTPRRGCVRCRRRRSVSRVAGNRRCRWMFLTARRGG PARVQVRLRCPARSPERGPLLGWLPGGGAFVMPRHLPSPVGVIVPGTISSRSQQEIPSQR RTQLRSPDSPPDYPQNRPTPSPEGKKKTS >gi|302034487|gb|GL383264.1| GENE 24 22156 - 22812 165 218 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3905 NR:ns ## KEGG: HMPREF0675_3905 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 20 202 1 183 494 310 99.0 4e-83 MGERASRRGAAARGAGGRAVKPRHVVAHSVWSGGQARGVHGNPTGGRQVFGWVAPASDEP KTVGQERLVVGLQVTIGAQLLPLMTQLVIWATTRLVPMLKRTGDWLKNHHRQIADLAPKI LKVALALAGVFSAIKLVNIATSLTTSILGLVATPVGQVVLAVGAVAAAIAGLVAALIYAY HHCREFHDGGTRWSTASCRPGVGRSGSSRCGCRRRRAS >gi|302034487|gb|GL383264.1| GENE 25 22906 - 23166 89 86 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313764650|gb|EFS36014.1| ## NR: gi|313764650|gb|EFS36014.1| conserved domain protein [Propionibacterium acnes HL013PA1] conserved domain protein [Propionibacterium acnes HL046PA2] conserved domain protein [Propionibacterium acnes HL036PA1] conserved domain protein [Propionibacterium acnes HL050PA1] conserved domain protein [Propionibacterium acnes HL072PA2] conserved domain protein [Propionibacterium acnes HL053PA2] conserved domain protein [Propionibacterium acnes HL046PA1] conserved domain protein [Propionibacterium acnes HL030PA1] hypothetical protein HMPREF9337_01332 [Propionibacterium acnes HL096PA3] conserved domain protein [Propionibacterium acnes HL043PA1] conserved domain protein [Propionibacterium acnes HL092PA1] conserved domain protein [Propionibacterium acnes HL083PA2] conserved domain protein [Propionibacterium acnes HL025PA2] hypothetical protein HMPREF9343_01780 [Propionibacterium acnes HL099PA1] # 1 86 1 86 86 158 100.0 1e-37 MADAAPRGALADRSSWTCLPGRLKPTAHENEVRTPDKGSVCGPSHMTGDRSDQPPTDRHM LIWRLKLRLSSVMAELVAGGGRSWEV >gi|302034487|gb|GL383264.1| GENE 26 23250 - 23462 188 70 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3906 NR:ns ## KEGG: HMPREF0675_3906 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 70 33 102 102 115 100.0 8e-25 MHGQIPGAVMHVVLAILFAVIIGPAILRFGTDAALWLMAANLALLIIIAVHDFDHMRQAM AWGTRSRSPC >gi|302034487|gb|GL383264.1| GENE 27 23432 - 23779 277 115 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3907 NR:ns ## KEGG: HMPREF0675_3907 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 115 1 115 115 159 100.0 4e-38 MGYTFTIPLLIVNFIVYVPGALAFVLASRRPVAGAVATTVAGPLIAIAFLKLHLLGAWVP VWGPWNEPFTVLGVDTLSWAILWITAVVGIVVGLVGAYLLGRSGAERAGAGTASS >gi|302034487|gb|GL383264.1| GENE 28 23894 - 24130 198 78 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3908 NR:ns ## KEGG: HMPREF0675_3908 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 78 1 78 78 124 100.0 1e-27 MQSAGINRGALYTHYSSLGELAFALLADGYREIADVHLAARAGRAVDPATVVAEPQRRIV DLYVAHRALFAAAESLSP >gi|302034487|gb|GL383264.1| GENE 29 24373 - 24693 117 106 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3910 NR:ns ## KEGG: HMPREF0675_3910 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 106 1 106 106 190 100.0 2e-47 MAAAEAAGDYCDARCVQVRIPISPGVHIEGVLRLPASDPVASLVVHGATATSSHFYRGFA QDFGAVTADPTRRVRLPRPQQRAGVFPTAAQLKRLTENSRKPTGRW >gi|302034487|gb|GL383264.1| GENE 30 25001 - 25378 142 125 aa, chain - ## HITS:1 COG:STM0838 KEGG:ns NR:ns ## COG: STM0838 COG0488 # Protein_GI_number: 16764200 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Salmonella typhimurium LT2 # 6 97 165 251 530 64 40.0 4e-11 MSKSGLALEALLRGPDDLLLLDEPDNSLDVPGKRWLEEQLRATDKGVLYVSHDRELLAQT ATSIITLELGVAGNTAWTHPGGFDTYHRAREQRFERLDELRRRWGNLASSAFRCGCTVGG PGSAL >gi|302034487|gb|GL383264.1| GENE 31 25329 - 25862 177 177 aa, chain - ## HITS:1 COG:CAC3339 KEGG:ns NR:ns ## COG: CAC3339 COG0488 # Protein_GI_number: 15896582 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Clostridium acetobutylicum # 1 115 1 130 518 61 32.0 7e-10 MGHLDVATVSYTLPDGRPLLRNVAFSLGTGEQVAVVGANGAGKSTLLRIVMGQLSPDSGI VTCDGNFGVMGQFITGRTVKELLLSVSPPEICVAAAQLARSEAMMNKKGTTQSQLVYASA ISEWGEVGGYDVEVLWDVCTVAALGVPFERCRHRSLSTLSSGEQKRARAGGAAAWPR >gi|302034487|gb|GL383264.1| GENE 32 26067 - 26291 116 74 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313764641|gb|EFS36005.1| ## NR: gi|313764641|gb|EFS36005.1| hypothetical protein HMPREF9567_01492 [Propionibacterium acnes HL013PA1] hypothetical protein HMPREF9604_01760 [Propionibacterium acnes HL036PA1] hypothetical protein HMPREF9606_01735 [Propionibacterium acnes HL036PA3] hypothetical protein HMPREF9618_02320 [Propionibacterium acnes HL082PA1] hypothetical protein HMPREF9592_02444 [Propionibacterium acnes HL046PA1] hypothetical protein HMPREF9588_01841 [Propionibacterium acnes HL025PA2] # 1 74 1 74 74 120 100.0 4e-26 MPRTTSGGQGAPTWQTFLMPCQSGASDGRTSAHEELVVIDLVTAVVPNLPPDRIRTLPLD TVITLLHTTPTSAH >gi|302034487|gb|GL383264.1| GENE 33 26337 - 26894 194 185 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3914 NR:ns ## KEGG: HMPREF0675_3914 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 185 1 185 185 371 99.0 1e-101 MQTDPFAILPLDKWKWHPSPLAGQIVYVLTSSASGELDLAPKSWVQMAGFNGPLLSLGCS KHHWTHNDIMTTGHYTVSFPTVEQTRCAGAIARTPRAERVAASGLTPVPSSTAGIPHLRE CPAYCECELYREVALEGDEVLILGQIRCLAVHTDVIGLGPGEMYSRLAPGFFLEPGVTGT LALED >gi|302034487|gb|GL383264.1| GENE 34 27081 - 27368 105 95 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3915 NR:ns ## KEGG: HMPREF0675_3915 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 29 95 1 67 67 80 98.0 2e-14 MVALLDGDVGVAVVAAGGVAGGVDVADALSGGDDAVVGGKDGGAVGASSSALGWSLVTPV MGWTRIPNAEVATRVPWGSGNTTRPDAGTGGGTKS >gi|302034487|gb|GL383264.1| GENE 35 27372 - 27590 82 72 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3916 NR:ns ## KEGG: HMPREF0675_3916 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 35 72 1 38 38 64 100.0 1e-09 MSLLVLGENQNRVRERPSSILTRYQLLDCTNLPVMQLIKLHFPSRPGILYAPRLFVAIAR NSPLVALLEKQP >gi|302034487|gb|GL383264.1| GENE 36 27593 - 28099 321 168 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3917 NR:ns ## KEGG: HMPREF0675_3917 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 10 168 1 159 159 298 98.0 7e-80 MFARDGFDSVTVEQITEAADVSAMTFYRHFGSKEAVVTSVATTDQMNHAIGALDRIRIPG EIPDVLDDFFADAASWEAELAERVALVRANQTLVNALWQRSTSWTDAISEVLGPGLDSRI YARVLVGTITETVLAWPDSPEFPSSFALRELIEKTLSSFVNYHQHRGI >gi|302034487|gb|GL383264.1| GENE 37 28022 - 28207 60 61 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRSLNLKDTAQFRAPYSSWLSDPGNTRGTHIGDVIGSDTAVLMVVHEAGQGLFDEFPQRK A >gi|302034487|gb|GL383264.1| GENE 38 28225 - 28407 155 60 aa, chain - ## HITS:1 COG:MT0947 KEGG:ns NR:ns ## COG: MT0947 COG3328 # Protein_GI_number: 15840343 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Mycobacterium tuberculosis CDC1551 # 4 58 334 388 439 74 65.0 5e-14 MTDRSYPAMIRLRRNAWTEFVPFLDYDVEIRKILCSTNAIKSLNTRFRTVMRAQGHFPTR >gi|302034487|gb|GL383264.1| GENE 39 28508 - 28708 94 66 aa, chain - ## HITS:1 COG:MT0947 KEGG:ns NR:ns ## COG: MT0947 COG3328 # Protein_GI_number: 15840343 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Mycobacterium tuberculosis CDC1551 # 6 66 84 169 439 82 52.0 2e-16 MDDLVGRGSGNSHNSTFEPQLVKKRQRRLSDMDLILSLFVKGLTTGEIAAHFAEVHGTSV SKDTIS >gi|302034487|gb|GL383264.1| GENE 40 28606 - 29007 78 133 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAQTFLTAAEIVELVAAYEAGETLRRLGKQFHIHRLTATAHLARRGVPVRQRSLGSVQNK GGRPGLPSRLHARATGPPVRGGRADHASNHHTTAGVDPTRWTTSSAVARAIPTTAPSSHS WSRNVNAACQTWT >gi|302034487|gb|GL383264.1| GENE 41 29070 - 29408 166 112 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|328754890|gb|EGF68506.1| ## NR: gi|328754890|gb|EGF68506.1| hypothetical protein HMPREF9588_01847 [Propionibacterium acnes HL025PA2] # 1 112 65 176 176 179 100.0 6e-44 MSGTPLATSAHTVRAAEPESSHSLRRSTDRWRSAADKRKQLAAVAETSKNSRYRKLSGRE VSRRNTRGLVVDKPSLIYPDMGIMRSETKLQRTASSNVDPTHALLGPVQLLL >gi|302034487|gb|GL383264.1| GENE 42 29393 - 31258 938 621 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3920 NR:ns ## KEGG: HMPREF0675_3920 # Name: not_defined # Def: efflux ABC transporter, permease protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 621 1 621 621 1064 99.0 0 MRELTVLSVRLVRQHLTLYLGCLATIVATAALTSAEAGLVHGFSDITRVHVAGFSTEEVA TQLPGIRSILTLLAGLAIAISGVLMITAIRQVIASRQEELAMMRLTGASRGLLARMIASE SFILGLLAGLPGALIGAALTYPLFRGMQAVGFFGRTMTIDFRFPVGSMFAVTGLIATVAA TAGCVATRISIRGDLLASIAPMARRMSWWQIAWRFVLILTGVVSLVVLDPQGMGTNIILI LPILAVVPLLAAAPLAMPIGAWVVGRIVGLFAPGPGKLAARRAAKDRMRYARLVTPAIIS CGILGGFLVANAPDEQMRTQALTAQVAADTVITTNLDDATPIAKALGHKTRQQSRLASRY RVAGGTRRMWHFTDAPAFAKLTNLHITAGDMSRVTGTNIASGIGNSVGDRIAVVDNTGHP VTLTVVAVFTDEVYEGLIFDWGQISALGPKNTTATIFTKGLSTGEVRSVLQSEGISGTVF DKTGFVQYMSDLRRANTYRSNVGLFATVYLMCLIGVIQTTISNGLSRRKEFQVLRSLGVS RLGILATVGVEAAILQVVTGILVFSVILALGFRFASNNGTSAWAAVSAALPTTAGAFCLI AVLTVVAQLIGSQVSLRYSSN >gi|302034487|gb|GL383264.1| GENE 43 31246 - 31998 286 250 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 13 232 2 225 245 114 32 6e-24 MTRLREEPPVPTLEVKELHHRFEKGPEVLRGVSVTFQSGTMTAIMGPSGSGKSTLLNCIS GLVRPKTGKVLYNGADLTGFSQSDLDKLHRRSWGFIFQSYNLVDALTSADNVKLPALFDR KRMDNATVEAALGRVGMAGFAHRYPDQLSGGQRQRVAIARAIASTREVVFADEPTGALDS ESRREVMTHLEALSQAGSTVIIVTHDPVVAASASRVLFLFDGQIADDSTGMDAVAISSRI AALEAQACGS >gi|302034487|gb|GL383264.1| GENE 44 32112 - 33311 606 399 aa, chain + ## HITS:1 COG:BMEI1583 KEGG:ns NR:ns ## COG: BMEI1583 COG4564 # Protein_GI_number: 17987866 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Brucella melitensis # 147 395 189 427 439 81 26.0 3e-15 MHSVEPSSVTRRVWPNGWSWNPIRFVFSTANLKSLAHAFVLAVLCGPMALLSLLGLVLIG GVGSASDDMWRGMAFWRGCRVPRPRTPGVDWRTWLCALVQMLLGAAAFGVLSMGSVLAGA FAWAAITTQHGWDLFGWYPGDGLARPVMASLSLITLMLEIVSCWVLSGLSVAVWALLTMT RTTVDDLQRSRKVLTDSFSSERRRIERELHDGVQQYLTATQLALATAQLASTDNPEALAA IAIAQENTGRAVAALRTTIRGIHPRVLDEAGLTEAVRELVGLSGLRGSVQVQENGHDQQV SSSGAVLLYHAVAEAMTNAVRHGGASAVAVTVTWHAESVEVTVVDDGTGPQDGAVSPDSS GLAGLTQQAEMLGGSLWFGQDKATGGGRLRVQIPRKTAV >gi|302034487|gb|GL383264.1| GENE 45 33326 - 34009 590 227 aa, chain + ## HITS:1 COG:SP2000 KEGG:ns NR:ns ## COG: SP2000 COG2197 # Protein_GI_number: 15901823 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Streptococcus pneumoniae TIGR4 # 1 193 1 181 199 82 30.0 7e-16 MKVLLAEDSALLRAGLCQLLRAMGHHVVEVGDADTLLQAGRFSDIEAIVTDVRMPPRMAD DGLAVVHELRRERLAEGRPVLPVIVLSQYVAAAYLDRLLDYGAFGYLLKERVSDVAEFSR ALVDVVAGGTVVDPEVTRALVGAASDGLAMLTDRERDVLELMAQGLSNSQIGERLFLSRS GVSKHVANVFIKLGFDPTDDNRRVRAVLVWLRREGIHRAPSKLLEPR >gi|302034487|gb|GL383264.1| GENE 46 34075 - 34251 91 58 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3924 NR:ns ## KEGG: HMPREF0675_3924 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 58 3 60 60 110 98.0 2e-23 MLGPGLGSRISAWTLVGATIEIALIWHDSPVFPWSSALRVPMEKTLCELAENYRIGNT >gi|302034487|gb|GL383264.1| GENE 47 34303 - 34665 174 120 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3925 NR:ns ## KEGG: HMPREF0675_3925 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 81 120 1 40 40 78 97.0 8e-14 MTEKQVRTVLPTKDEPRAHRGRSTEFDDGGPDDFDIPGEGGAACAWTESLCVDSVTRFIV RVPVQEGIDPEIERYCDRHWVLKLAEIIETDMPICKHSLRDHVISTGELVGDTWEVRTEG >gi|302034487|gb|GL383264.1| GENE 48 34662 - 35777 764 371 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3926 NR:ns ## KEGG: HMPREF0675_3926 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 34 371 1 338 338 701 99.0 0 MKKEHERSLPLALPDDYLLPYGTELTPSSFTKTMDNTYIVDALDSHGNPAHYEIAVNGNL AKCTIDGEAASYENPYSHRDTGAEAPILDWFDWIASQDAAGHRYLDSDIYGGQTVAAKLF CAEHNLVTYSSTKCCVSNFSTLSEFQEWLDSSVLQETPMRAEVVGLLTDPEQARKPFSYA FDLLDAIEGPDAVSELKLATAGEKDCGLRLTSANFGGNEILLEDGRTMGRTVSMVKACYD DGTQPTWMHAIGFVPKTYLPEMNVRVVHENDAAWWGILVDQLDVCLVLPRPSAERQLDTN VKVHMDRDGTEAFIRFSPTDECELVNRLDDRFKRKWGRWLDSSIVLDNREIQDAVTHMES ILDKEYGGRTA >gi|302034487|gb|GL383264.1| GENE 49 35970 - 36275 239 101 aa, chain - ## HITS:1 COG:YPO3839 KEGG:ns NR:ns ## COG: YPO3839 COG5441 # Protein_GI_number: 16123974 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 1 101 126 225 405 76 43.0 1e-14 MSSGDARAYVGQADVTLMYSVVNVADINHVSRMFFANASAAIAAMVKEYEEAGIVSNTAH NKPVAGLTMSGLTTPAADEAARLGYEVLVFHTTDSGEKSME >gi|302034487|gb|GL383264.1| GENE 50 36309 - 36653 128 114 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3928 NR:ns ## KEGG: HMPREF0675_3928 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 71 114 1 44 44 85 100.0 5e-16 MGSPAGSTIPKASATVCRDICRANFDNHTWSIALLRNQRYNHIGQFVSSSMVQAESPNYG HDDMITKECFMAAIAVFGTLDTEGDELDWLRHRILTNGSKVESSSMLAHSPTAA >gi|302034487|gb|GL383264.1| GENE 51 36568 - 36741 100 57 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3929 NR:ns ## KEGG: HMPREF0675_3929 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 57 1 57 57 98 100.0 7e-20 MWLSKLALQISRQTVAEAFGIVEPAGLPILRAAIAEPFARDGVPTVPQRIAVNTGVC >gi|302034487|gb|GL383264.1| GENE 52 37222 - 37461 114 79 aa, chain + ## HITS:1 COG:no KEGG:PPA0875 NR:ns ## KEGG: PPA0875 # Name: not_defined # Def: GntR family regulatory protein # Organism: P.acnes # Pathway: not_defined # 1 79 384 462 462 147 93.0 2e-34 MFPAWVWTASQSGTGLWADTHNDSSALAEPAKRVGVRLAPGPGYSAYDGQRTMLRLPVWH EPESLEKALGMLRRAISDR >gi|302034487|gb|GL383264.1| GENE 53 37461 - 37700 69 79 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|314987615|gb|EFT31706.1| ## NR: gi|314987615|gb|EFT31706.1| hypothetical protein HMPREF9595_00770 [Propionibacterium acnes HL005PA2] # 29 79 1 51 51 89 98.0 8e-17 MTPIDSGAPARCCGGWRGCGVGCSHEWNVSAIKTGGRWEYTHSRSKRMKGAWAQEAGDGR RAFETGLQDLAAGPIPDLA >gi|302034487|gb|GL383264.1| GENE 54 37720 - 37959 131 79 aa, chain + ## HITS:1 COG:Cgl2316 KEGG:ns NR:ns ## COG: Cgl2316 COG3464 # Protein_GI_number: 19553566 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Corynebacterium glutamicum # 1 50 234 283 436 58 56.0 2e-09 MDGFAGFKTAAAEEIPKATTVVDRIHVIRLAGDALDLCRCRVQIELYSTRDRRHHLLTRI SEPSPPAQIIYPLTSNSSA >gi|302034487|gb|GL383264.1| GENE 55 38021 - 38188 148 55 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3932 NR:ns ## KEGG: HMPREF0675_3932 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 55 1 55 55 89 100.0 4e-17 MFAVYRASTRAEGKKTMTRLINSIASAAPTSLAAVCKLGRVLTKRGEDILAFLPP >gi|302034487|gb|GL383264.1| GENE 56 38492 - 40831 426 779 aa, chain - ## HITS:1 COG:CAC1464 KEGG:ns NR:ns ## COG: CAC1464 COG0178 # Protein_GI_number: 15894743 # Func_class: L Replication, recombination and repair # Function: Excinuclease ATPase subunit # Organism: Clostridium acetobutylicum # 11 769 4 754 755 604 41.0 1e-172 MHNLRKDIVSRSSVGSIQIHGAKTHNLRDVTVCIPKHALVGVAGVSGSGKTSLVSTLAAG AQQAVSSLFPAFVQARLNTLEPGLVDGLQGLTFTAIVGQKKFSGNARSSVSTASGIAPYL RLLFSRSESPSAGYSPSYSPNDPRGMCMDCSGLGYVDGIDLQELIAPDRSLNEGAVRFPS FEPGTYRWKRLVCSGLFDPDVPWKELPEASRKLLLHGQGVRLERPLTGYPKHGIFDGIIP RLKASYLEKANAKTTEKEDAALRRIVKRVVCPHCHGQRINEAARASRIEGLNIAEASHLS IDECIAFIKTITDEITEAPRQAVLARLNNMRDIGLGYLSLDRPTDTLSGGEAQRLRLVSL LDAPITDATFVMDEPSSGLHPADIERLLRSLRKLRDSGNTVIIVEHNLQVLAACDHVVEL GPGAGDDGGRVLFEGSPRSLTRSDTPTGKALRAGIQLNRRSRPATDVIEVTHARCNNLGD VSVSFPVGALTVVSGVAGSGKSSLASALAQQHPEVTIIDQLPLAASSRSSILTALGLESP IREAFSKISGLTTSWFSANGKGACPLCKGRGTTHVDMAFMDDVQTPCERCGGRKFNETTM AVRLPMGSLNPTIADVLDSGLNQVSELYATQDDVLTVISLLQQVGLGYLTLGRTLNTLSG GELQRIKLVQFLKEHREEQESVLVLDEITTGLHPKDVEQLIQFLRRLSERGATAIAIDHN PGLISQADYNIDIGPGAGTQGGTVVFTGTAWGLANCPASTTGKWLHKLVCSPAGVEPAP >gi|302034487|gb|GL383264.1| GENE 57 40824 - 41252 185 142 aa, chain - ## HITS:1 COG:no KEGG:PPA2399 NR:ns ## KEGG: PPA2399 # Name: not_defined # Def: transcriptional repressor, MarR family # Organism: P.acnes # Pathway: not_defined # 1 142 1 142 142 221 99.0 9e-57 MDLRSILMHLQCELVAERSLVNPLDISWLQYDVLLQLDREHEMLPSELSLVMGISRTKLS KALKSLKVMGYVRQTPSKSDGRELRTSITESGRRLLEDISLQHTSLYETAIRSMTKDELE VFARLSEKLYSSLKQQRIASHA >gi|302034487|gb|GL383264.1| GENE 58 41679 - 42623 585 314 aa, chain - ## HITS:1 COG:VCA0621 KEGG:ns NR:ns ## COG: VCA0621 COG2390 # Protein_GI_number: 15601379 # Func_class: K Transcription # Function: Transcriptional regulator, contains sigma factor-related N-terminal domain # Organism: Vibrio cholerae # 5 310 10 318 331 121 29.0 2e-27 MTDREHIQTLLTVARRYWLEQATQAEIAAEIGYSRSMVSRLLDEARRRGIITFTVQHPLE RAIELEDALTRTFGLTCARVAMSNDNATADEVARMAADLVTTYMHPDSVIALSNGRGVAS VVHAMTPIRRPGATVVQAIGGTAKGNLLLDSPELCRQLAERIGCAYRVMPAPVLVSNPQA AAALKAEESVGMTIAMASHADILVTGVGTVGMHSVAPIFDHVMSERAHTELLSRGAVGHI CGHHVDTRGRHIDADFCQGLMAVPLDRIPSITHVIVSAFGSEKVPALTAILRGKWVTDLV TDIATARAVLGHLD >gi|302034487|gb|GL383264.1| GENE 59 42805 - 43797 1213 330 aa, chain + ## HITS:1 COG:MYPU_5930 KEGG:ns NR:ns ## COG: MYPU_5930 COG1735 # Protein_GI_number: 15829064 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase with the TIM-barrel fold # Organism: Mycoplasma pulmonis # 5 326 6 327 351 218 37.0 2e-56 MAVVRTINGDVSPDTLGVVNAHDHLIRVGAGEVYIDPDHLLDDVDKAAQEATYFVEASKS WAAGGTIIDMCPASSGRGVLKTLQVVEKVPGLQVVQATGFHQQKVYLEWRQSWVNQYTVT QIADLLIADIVEGIDRFDYMGPIVERTNVKAGVIKWATAYGKITEWEKKSGQAVAIASKE TGCPINTHVTAGTCGPEQARFLVDQGVDPAKIAIGHMQRNWDPWVHEQICKLGCYVELDG TNRIKYVPDNTRVNLVKTLGEKGYGKQILLGTDSGKASYQKVYGSVSGIDYDPAVFCPRL VEDEGVDRDYVNDLLINNAATFFGFEPLAG >gi|302034487|gb|GL383264.1| GENE 60 43803 - 44456 596 217 aa, chain + ## HITS:1 COG:STM4386 KEGG:ns NR:ns ## COG: STM4386 COG0269 # Protein_GI_number: 16767632 # Func_class: G Carbohydrate transport and metabolism # Function: 3-hexulose-6-phosphate synthase and related proteins # Organism: Salmonella typhimurium LT2 # 1 215 3 215 216 182 45.0 5e-46 MPRLQIALDTYDLPSALAPLATAVDQIDIIECGTILVLAEGMDAVRAIRAAYPDKTILAD VRIAEAGAKIARMCFEAGADLVSCVAGASLTTIDQVCKVAGEFGGEVQVELADEWYDAER ARRWRTLGVQHVIVKRSRDREAAGDLSWKPEDLGRVDELAGMGFTVTVTGGITPEDLPVF AGHPVGIVIAGRSIVAADDPKAAAKRLRSTLDEVWPQ >gi|302034487|gb|GL383264.1| GENE 61 44453 - 45340 558 295 aa, chain + ## HITS:1 COG:ECs5173 KEGG:ns NR:ns ## COG: ECs5173 COG3623 # Protein_GI_number: 15834427 # Func_class: G Carbohydrate transport and metabolism # Function: Putative L-xylulose-5-phosphate 3-epimerase # Organism: Escherichia coli O157:H7 # 5 288 2 280 284 211 38.0 9e-55 MTESLTDGVTLGIYEKALVGNPLATDDDWRRFLNQVPEAGFSFVDLSVDESEERMARLGW DQRRRRMVRHCVEATETAIGGVCLSVHRRIGPGSADPAVRQRAREVMGEGLQLCHDLGAP VLQVAGYYCYYEQMNDHAEQWYTDLLLDAVPMAARLGVVMGIENVDGTDVTSIRKAMEFV KLADSPYLQVYPDLGNIAEQQLDVVTELEAGRGHMVAIHVKDVRPGEPRRVPMGEGTVDW DESFAVLAEQGWRGRMMIEMWNDDAPDSNTRSASARQFIEEHLRTAGIPVRRALF >gi|302034487|gb|GL383264.1| GENE 62 45428 - 46096 611 222 aa, chain + ## HITS:1 COG:TM0283 KEGG:ns NR:ns ## COG: TM0283 COG0235 # Protein_GI_number: 15643052 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Thermotoga maritima # 1 212 43 252 254 201 46.0 1e-51 MLEKLKTDVCRGNLELPRHGLVTWTSGNLSARDPETGLVVIKPSGMLYDAMTPDDMVVVD LDGKVVEGHRGASSDTASHLYVYRRRDDIRSIIHTHSTFATAWAATGQDIPCAVTAIADE FGGPVPCGDYAQIGTEQIGEQIMRFIDQSPAVLLKKHGVFTVGTSIEKAIKAAVMVEDVA KTLTYAKLIGEISPLPQSEIDSNHDRYTNRYGTAAASTGVTA >gi|302034487|gb|GL383264.1| GENE 63 46093 - 47043 805 316 aa, chain + ## HITS:1 COG:TM0067 KEGG:ns NR:ns ## COG: TM0067 COG0524 # Protein_GI_number: 15642842 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Thermotoga maritima # 5 306 3 325 339 128 27.0 1e-29 MTYDISTIGEGQIRLTCYKGERLINAQQLRATAACSEANVSGLLSQLGRSTCWASVMPKG DLTDRVVNEFRSVGVDVSHICMKPEGRVALYFMEPGEYPMPARVLYDREHTPFRDVTVED LDWEALLDTRLVFVTGITAALTENTAAVVRHFVDEAHRRGIAVALDVNYRSLLWGPEHAR EVLEPIARMSNIVFCSVRDGKAVFGIESDGEQACRELRELFGVPTVVSTDQINGVYFSDA ERGDCTFPVVQVPVIDRPGAGDSFVAGTLHGYLGGDVVQGIHYGQRTSAYALTHYGDLTR VSPSELNIPPNTDILR >gi|302034487|gb|GL383264.1| GENE 64 47078 - 48436 1336 452 aa, chain + ## HITS:1 COG:Cgl2919 KEGG:ns NR:ns ## COG: Cgl2919 COG0477 # Protein_GI_number: 19554169 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Corynebacterium glutamicum # 13 402 7 399 439 138 30.0 2e-32 MSTSTTPKQSALDLIDSRPLTRNQKNLVALAVVGNISEFFDIFLIGFVVSVLTKPWNLTG TEAGVILACSGLGTVIGAIMWGRLADKIGRRSSFFWCVLLFVVFTVVSVFTPDRGWIMLA ILRIGVGIGVGGLNITSIPYVQEFVPAKQRGLLAGLASVFIPLGLFLGSLAQNALGDNWR ALIALGAIPVFLLVWIRFVPESPRFLQSHGRDKEAREALAWALDMPADDIGDLPAVEHVQ DASYSLVFGKYRKSLLIVSLGSFCFILGSFTIQSWGQTLLKTGFGKSPEQVGTLFMFVSL ADLIGRFLSAWLADRIGRRATMLSFGLIGAGGTLIIALSARLGWGWQIFFVGVLIAMAFA DGAFGILNAFGAEQFPNEARSTGLGLGYGIGATAKIIGPALMGLMVGGSAVKQNVTLDAV FPAFILFAVLLVIGGMTYMFARETRGTSLDTI >gi|302034487|gb|GL383264.1| GENE 65 48850 - 49233 114 127 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEANPSDSSGLSTMAGTAPADSNTLAVKLATTMFVRHCTSGLSRRNRSTDSATKFDNSVM STTPFAGMIRTGSGGRHLRGALSAHSDQWAPASLPSNLPPCRALTTVLALLIGKCRLKPA PTRQRSG >gi|302034487|gb|GL383264.1| GENE 66 49055 - 49864 603 269 aa, chain + ## HITS:1 COG:ZthiM KEGG:ns NR:ns ## COG: ZthiM COG2145 # Protein_GI_number: 15802579 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxyethylthiazole kinase, sugar kinase family # Organism: Escherichia coli O157:H7 EDL933 # 9 256 12 259 262 168 42.0 1e-41 MTELSNLVAESVERLRRDKPLVQCLTNIVVANFTANVLLSAGAVPAMVDNPEESEGFASI ADGVLVNTGTPYRETAEAMIAAARGAASSNTPWVLDPVGVGMPWRTRVALDTLDVAAPAV IRANASEVLALAGTGASARGPEAGDAVEDALASATQLVRRYGCVVAISGPVDHILDADRH VIVSSGHEWMTRVTGVGCSLGALTAAFAGIQNDHLIAAVSATAMLCVAAERAAERSAGPG AFAQALVDELFLVSPDEVGERGGLRDVTA >gi|302034487|gb|GL383264.1| GENE 67 49851 - 50501 501 216 aa, chain + ## HITS:1 COG:CAC0495 KEGG:ns NR:ns ## COG: CAC0495 COG0352 # Protein_GI_number: 15893786 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate synthase # Organism: Clostridium acetobutylicum # 7 205 5 199 211 147 40.0 1e-35 MSRPEFDLSVYLVTDTAQCGGPDEVVETVRHAIAGGVTLVQFRDHDLSDDEFVALGRRVR EICVSGGVPLIIDDRVHLVAEIGADGVHVGQSDMPVDQARAILGDDLLIGLSAQTPAHVE AALSQGRDIVDYLGVGALHGTGTKPEAGELGLAEIRDVVNASPWPVCVIGGVSASDAQDV ARVGCDGLSVVSAICRSTDPKSSARELAEAWRTAKE >gi|302034487|gb|GL383264.1| GENE 68 50614 - 51582 894 322 aa, chain + ## HITS:1 COG:CAC0267 KEGG:ns NR:ns ## COG: CAC0267 COG0039 # Protein_GI_number: 15893559 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Clostridium acetobutylicum # 11 321 2 312 313 252 40.0 8e-67 MTVMSTFDATRRASKISVVGAGSVGSSLAYACLIRGSAGLVSLYDIAKDKVEAEVADLAH GTQFTPASVMGGADVHDTADSDVVFITAGARQKPGQTRLDLAGVNANILRSLMPQLVEQS PNALFVLVTNPCDVLTVVAQEATGLPANRVFSTGTMLDTSRLRWLIRQWANVEQRHVHAT IVGEHGDSEFPLWSTANISGVPIRDWAVDGNRVFTEDVLADLAHEAAYAAYKIIEGKGAT NYAIGLTGARLAEALLRPGRSVLPLSSVMTDMHGISGVALSMPCIVSRDGIEGVVPVAMD TEEIASLKASAERLRDTLSSIA >gi|302034487|gb|GL383264.1| GENE 69 51625 - 53331 1148 568 aa, chain + ## HITS:1 COG:BS_malS KEGG:ns NR:ns ## COG: BS_malS COG0281 # Protein_GI_number: 16080040 # Func_class: C Energy production and conversion # Function: Malic enzyme # Organism: Bacillus subtilis # 14 568 10 566 566 628 56.0 1e-179 MSVPFQYAHDDDGGLLRIAARGQEVLTNPLANRGTAFTIEQRKALGLTGLLPSGVMTITD QLKRVYAQYSAQPDDLAKYLYLNHMHDRNEVLYFRLLAEHIEEMLPIVYTPTIGKAIEEY SHWYDRPRGIYLSIDDPEDMEQALAQLGHGPDDVDLIVATDAEGILGIGDQGVGGVAITV GKLAVYTAAAGIHPHRVLPVILDVGTDNMERLNDDGYLGVRHPRVRGERYDEFVQQYVET AHRMFPHALLHWEDFAAGNATRILNKYRDDYCTFNDDIQGTAAVVVAAVLSAVKSSGIPL NDHRIVIHGAGSAGTGIANLLVQLMVSQGADEKTARSHFWGLGSHGLLREGLRLRDFQQP FARSKEELEGWTLDSPDQYTLGDVVRNVHPTILIGCSAQPGAFTEDIVKTMAAQCERPVI MPLSNPTRKAEALPSDVLTWTDGRALVATGSPFKPVMVNGVTYQIAQANNALVFPGIGLG TIAVRASRVTSGMIAVAAEAVAMHIDNRVVGASLLPSIKSLRPLSASVAIAVAQQAMEEG VATEVTDNPVEKVFSAMWQPRYPRIAVV >gi|302034487|gb|GL383264.1| GENE 70 53400 - 53954 302 184 aa, chain - ## HITS:1 COG:no KEGG:PPA0889 NR:ns ## KEGG: PPA0889 # Name: not_defined # Def: putative glucoamylase S1/S2 precursor # Organism: P.acnes # Pathway: not_defined # 1 184 1 184 184 290 98.0 3e-77 MNQPPDINQYRPPKRHGGWIAVIIVTALVVALVIVARRVTTEPANPVTPTPSPIATSASS TPTPIPASATAVASSLPFSSKDDDTEGRWSIDHVEWGPNTVTLTMTIAVTKGSLTDYTFF IMENQSTDIHQASQPPTGSLGTGVSQGHKVHGTITIDCPRTDATVMLTHGSGMSSPISAL MIRA >gi|302034487|gb|GL383264.1| GENE 71 54094 - 55116 393 340 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3949 NR:ns ## KEGG: HMPREF0675_3949 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 340 21 360 360 656 99.0 0 MTALHSSTADNRDPLTVRTVEEAVTLAPYLLGFQPTESLLMIVADDGAACQGFVARADLD GLESAPAMNAFAARVGPLAGQGRTVVLAFSKDQDRGMVTLASAVEAMKGMNIGDAAWTDG EYWRSIFCDEQGCGENHRFVPDPTIAAEAVYRGLTVLPSRTSLVDKLSGPGRTCDPDTRR LLANSRRRLSRKDDNTVEVRCQALFESGDEINDAVVTELAVAVQRSDVARRLWMSMERAD ASRWLRIWSRAVEIIPDRMAPAPLSLCGLAGWLSGEGAVAAVCARRCEFMVGTADLPAAL TVIVDAFVPPKLWDVMDHDPAVIAHPFLEEQVDEEINLSA >gi|302034487|gb|GL383264.1| GENE 72 55126 - 55914 791 262 aa, chain - ## HITS:1 COG:L104065 KEGG:ns NR:ns ## COG: L104065 COG1814 # Protein_GI_number: 15673456 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Lactococcus lactis # 36 259 3 226 226 152 41.0 6e-37 MSSIPNMSALALAHDASSTESTRSSTPSRQPHEPDKGTGSLNSKLNWLRAAVLGANDGII STAGIVMGVAGATVNRSSLLIAGLAGLTAGALSMAGGEYVSVSSQRDIEKTVMAKETAEL RDFPDEKLEELTGIYTEKGLSRGTARQVALELTAHDPLRAHAEAELGLDPDEYTNPWHAA FASMAAFTVGALVPLLAMVCSPTATRVYITITATIVGLFLTGLGSALASGSGKTRPVARN IIVGMCSMTITYLTGHLVGTRV >gi|302034487|gb|GL383264.1| GENE 73 56104 - 58584 1948 826 aa, chain + ## HITS:1 COG:TM0168 KEGG:ns NR:ns ## COG: TM0168 COG0495 # Protein_GI_number: 15642942 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Leucyl-tRNA synthetase # Organism: Thermotoga maritima # 17 824 10 823 824 806 47.0 0 MSDQVRETTGYDAVAAQEKWSKYWEEHRTFASLDDGSRERRYVLDMFAYPSGDLHMGHAE AFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAAIKHGTHPAEWTYRNIDTQAASFKR YAVSFDWSMRLHTSDEEYYRWTQWLFNRFFEKGLAYRKDSWANWCPNDQTVLANEQVKDG CCERCGAVVTKRQLNQWYFRITDYAQRLLDDMDQIEGKWPERVLSMQRNWIGRSEGAYVD FTIDGRKEPVRVFTTRPDTLYGATFMVVAPDSALAQEIVSDEARPAFETYLDEVKKKSEI ERQATDHEKTGVPLGVEATNPVNGAKVPVWAGDYVLADYGTGAIMAVPAHDQRDLDFART YGIDVIPVIDTGEADPRESGVATTGDGAYQNSGFLDGIATKTEAIATMCEFLGEKGIGEP TITYRLRDWLLSRQRFWGCPIPIIHCESCGDVPVPDDQLPVKLPDLRGAELAPKGTSPLA GEEASEWRSVACPSCGGAAQRDTDTMDTFVDSSWYFMRYCCPHYDKGPFDVEAVRRWMPV AQYIGGVEHATMHLLYSRFFTKVLHDLGMVDFTEPFQRLMNQGQVINEGRAMSKSLGNGV DLGKQIDEFGVDAVRTTVIFAGPPDEDIDWADVSPVSTLKFLQRAWRVASEVTSDPDADL TQGDSTLRRVTHRSIADITELLEGGRYNVVVARIMELVNATRKAIDSGCGPADPAVREAV TFTAQALSLVAPYLAEEMWEMLGLEPSVANSHWPTADEKLLVADKVTMVVQVTGKVRAKL TVSPDITEAEAREVALADVNVQRFTEGKEIVKIIAKLPKMISIVAK >gi|302034487|gb|GL383264.1| GENE 74 58708 - 59559 262 283 aa, chain + ## HITS:1 COG:BS_comEA KEGG:ns NR:ns ## COG: BS_comEA COG1555 # Protein_GI_number: 16079613 # Func_class: L Replication, recombination and repair # Function: DNA uptake protein and related DNA-binding proteins # Organism: Bacillus subtilis # 126 283 62 204 205 102 41.0 6e-22 MNDDYRDRLEDLIARLPARNLGPRRSATPAEEEPAQEETPTPRRTVSRVHASAVGVLLVV VLSVIAVWLMRSKPTEVPAGAVMVSTVPEGTTMPGRETTESEASSESTTPAALPVATTTP AVGAPIQVHVAGRVKHPGVYTVNPNARVADAIEAAGGMTAGAHPGRLNLAAPVCDGCQVW IPVGGDGAVTPPDQSAGGPAGAVGGSGRSSGVAAASGSDKAPVNLNTANQSELETIDGVG PVMAGKIMAWRQEHGQFASVDQLREISGIGAKTFEKIKPHVTV >gi|302034487|gb|GL383264.1| GENE 75 59546 - 61900 778 784 aa, chain + ## HITS:1 COG:BH3961 KEGG:ns NR:ns ## COG: BH3961 COG2333 # Protein_GI_number: 15616523 # Func_class: R General function prediction only # Function: Predicted hydrolase (metallo-beta-lactamase superfamily) # Organism: Bacillus halodurans # 516 782 40 293 295 117 30.0 6e-26 MSPSKSHRDDYQRQVVSTPDVRMVPVAITACGMAAVGIGGHRWMILSAGIGCLAAGMIAV KRKAWLVVVSAAVGLTVLMSAGMRDLVVHHIGVAELAQEGAAVTVTGRVAADPRIFEVNG SGGSTVMITLVAHRIVAEAQAIDQSVRIVAMASGSTSGPATTVVVGQQVQVRGLLTPPRE GRAEAAVLKLRAPPRVVAPPGPLDRGVNRFRAGLVSAVAGCPEGQRAIVPSLVVGDTAAV SEEMSEEFRVTALTHLMAVSGANLASTTALLWWIGAWCGLKRRGLRATSVAGVVVFVVVC RAEASVVRAAAMGVVAMAATGVAFDRRGGIRTLAVAVTGLMLIDPWLVGSVGFWLSVCAT AGILWWAQPWSVAMEWAPAWLAVGVTVPWAAQVTTQPVITWMAGTVSTTGLVANLAAAPF VPPASTLGMVTGLLAFIWLPLGMPFGRLAGWCVQPIIWIAHFGAKAPSGLIRWPAGGWAL GVLAGLCMGLALITPTVLAKPWLTALAGLAVIAAMVVRPPLPGWPGQWQVAICDVGQGSA ALVRAGPHEAVVVDTGPDPHRLSRCLDDLDVAQVPMVILSHFHADHVDGLNAVHDHGLTR AIVVSQLSSPPWSAKRVAQTAAQLGARVVVANPGRVMTAGTAKLELWGGTQLSDTGKDES GEEPAVENNSSVVIKATVDELRVVLPGDAEPEEQHHILTGGTDLSSDVLVLPHHGSARQD EGFWAATGASVAVASAGQGNPFGHPSYKALSLAKRMGMQLHRTDLEGTVLLARNGGSVLV QTRS >gi|302034487|gb|GL383264.1| GENE 76 61997 - 63211 806 404 aa, chain + ## HITS:1 COG:MT2985 KEGG:ns NR:ns ## COG: MT2985 COG1061 # Protein_GI_number: 15842460 # Func_class: K Transcription; L Replication, recombination and repair # Function: DNA or RNA helicases of superfamily II # Organism: Mycobacterium tuberculosis CDC1551 # 16 404 41 427 602 347 48.0 2e-95 MASRFTAQGPRMPMRLRTWQREALDSYLATSPRDWLVCATPGAGKTTFTLAVAAHLWQDH VINRVIVVCPTDHLRSQWIAAARGLGLDLRDTTNAEALPPDCHGCVVTYAQVAQKPALHA ARATNMRTLVIFDEIHHAGDVMSWGSGVIEAFSGAVRRLGVTGTPFRSDEARIAHVRYEE VSDGAFESVADYTYGYGDALRDGVVRPVTFATYTGRSTWTDAVGETHTAILGDSELTKAH EEMAWRTALDSDGEWIAHVMAAAWARVSQLRESGTIPHAKVLIPASNQKVAKEYAEVWRD VTGNEPSVILSEDAASAKKLAAYRDNPDKICAVCVRLITEGVDVPDAAVLIYSTTASTPL FFAQMVGRVVRARNRRERATVFLPAVGRLLDLASQMEEVRDHVI >gi|302034487|gb|GL383264.1| GENE 77 63496 - 63834 266 112 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3954 NR:ns ## KEGG: HMPREF0675_3954 # Name: not_defined # Def: type III restriction enzyme, res subunit # Organism: P.acnes_SK137 # Pathway: not_defined # 1 112 469 580 580 186 99.0 2e-46 MLARDEKIRAEQARRIASARRASKASREAEERQARRDEAVALQRRGGSTIDTISDPREMR REIHRALLDYSRHHDLTPQAGWGQLYREVPGPKNESAPMDLLRTRLEWLHSH >gi|302034487|gb|GL383264.1| GENE 78 64225 - 65247 815 340 aa, chain + ## HITS:1 COG:Cgl2295 KEGG:ns NR:ns ## COG: Cgl2295 COG1466 # Protein_GI_number: 19553545 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, delta subunit # Organism: Corynebacterium glutamicum # 22 336 13 327 331 144 31.0 3e-34 MQTSLAHWRGYRSCGILGQVNSVYGTALLVQGAEALLSDRAVDARIKAARREFPDAELVE LEGREVDAGRFVEATGGSLFSQATIVVVNAVSDLDKDLFDLVATTAANPPDTLCLILVHP GGVKGKGLLTKLTKAKVEIVKADVPKPWAIPDFIVNEARRGHLDMDHDAVNALHQALGND LRTLAAAVGQLASDSPNGRVGAEEVTTYFGGRAEISSFNVSDASLEGRLPDALETLRWAL SIGVQPAAVTAAMARGLRSVGLYLDLRSQRMGDKQLAQTIGVSPWKLKSLNKQARSWSKA GVARAIRLVNTCDAAVKGAAVDPDYALESMLIAIDEARQA >gi|302034487|gb|GL383264.1| GENE 79 65369 - 65635 418 88 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|50842384|ref|YP_055611.1| 30S ribosomal protein S20 [Propionibacterium acnes KPA171202] # 1 88 1 88 88 165 98 3e-39 MPNIKSQIKRVKTNEKSRQRNKAVKSALRTYVRNFRRAAEAGDVEAATKAARVANRQLDK AASKGVIHKNQAANRKSAISKKLNSLAA >gi|302034487|gb|GL383264.1| GENE 80 65756 - 67669 1259 637 aa, chain - ## HITS:1 COG:DR0933 KEGG:ns NR:ns ## COG: DR0933 COG0366 # Protein_GI_number: 15805957 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Deinococcus radiodurans # 13 631 16 640 644 669 55.0 0 MVADDSLGHVSLDPSTQQSFDLRWEHYLPDLWIGLSRVYGDRADETLQRIRAILLKRCAE RPDDLKRLDEARLLEPDWLQQPTMIGYATYTDHFSGTLKGISDHLDHLCDMGVRYLHLMP LLQPRQGTDDGGYAVADHRTIRTDLGTMDDLADLTATLRAHGISLVMDLIVNHVAAEYEW ARRARAGQQKYRDYFHILSTQDEVDAWEKNLPDVFPDFAHGNFTWDDDCQGWVWATFNEF QWDLNWANPDVFCEFLDLMCVLANRGVEVFRLDAIAFIWKKLGTNCQNLPEIHDITQSLR QAIRIVAPAVAFMADAIVGPDDVTGYFGRGRHWGKVCDMIYHNSLMVQLWSALATRDVSL METALSRTPDKPSTTTWATYARCHDDIGWTVDDADARETGLDPVAHRQFLSDFYSGTFPG SFARGLVFQDNPVTGYRRISGSLASLAGLESALESDDPAGVDAAIARIVMLHIAILGYGG VPLIWMGDEVGMLNDDWQRDPGHADDNRWVHRPMMNWSMVKQAHAEPHSVPGRIWNGVRR AINARHRSPEFHASVDTVVLPSPHRKVIMWGRPHPEGRMIELYNISEHEVWFPMETLRSE LDDVVTELLSGFDYDLTPMNLRLAPYECLWLSDRSQA >gi|302034487|gb|GL383264.1| GENE 81 67797 - 69632 1598 611 aa, chain + ## HITS:1 COG:MT2476 KEGG:ns NR:ns ## COG: MT2476 COG0481 # Protein_GI_number: 15841921 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane GTPase LepA # Organism: Mycobacterium tuberculosis CDC1551 # 9 610 47 650 653 890 73.0 0 MSAPQPGSTDPAVIRNFCIIAHIDHGKSTLADRMLQITGVLDERSARAQYLDRMDIERER GITIKSQAVRMPWEVDGVTHLLNMIDTPGHVDFSYEVSRSLQACEGAILLVDAAQGIEAQ TLANLYLALEADLEIIPVLNKIDLPGAESDRHAAEIAGIIGCDESEVLRVSAKTGEGVSD LLDTIVAKVPAPEGVADAPARALIFDSVYDTYRGVVTYVRVVDGALRHREKILMMSTGAA HEVLEIGVISPEMVPAQGLSVGEVGYLITGVKDVRQSRVGDTVTNASKPSEKDLGGYQHP KPMVYSGLFPIDAKDFPDLRDALDKLQLNDAALVYEPETSTALGFGFRVGFLGLLHMEIV RERLEREFDLDLISTAPSVVHHVLMEDGSTVAVTNPSEYPTSGRIAEVREPIVDATILSP AEYIGTILELCQQRRGVQQGLDYLSSDRVEIRYRLPLSEIVFDFFDQLKSRTKGYASLDY HEAGEQAADLVKVDILLNGDPVDALSSIVHRDKSYSYGVAMAAKLKELIPRQQFEVPVQA AIGARVIARETIRAVRKDVLAKCYGGDISRKRKLLEKQKAGKKRMKVVGSVEVPQEAFVA ALRTGESTEKK >gi|302034487|gb|GL383264.1| GENE 82 69668 - 70636 453 322 aa, chain + ## HITS:1 COG:ML2268 KEGG:ns NR:ns ## COG: ML2268 COG4948 # Protein_GI_number: 15828213 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Mycobacterium leprae # 7 283 9 282 334 237 52.0 2e-62 MLADRGIDRMLAFAVPLTVRFRGIKVREGTLLHGPEGWGEWSPFWDYDPVESASWLRAGI EGATRRLPVARRDRVPINVTIPVVDADRAGRMAAESACLTAKVKVADPRSDLREDCRRVA AVREAMPDGHIRVDANTAWDVDAAVRAITELDAAAEGLEYVEQPCASVAELAQVRRKVNV PVAADESVRRAEDPLAVARAGAADLLIVKAQPLGGVARALEVIDATGLPAVVSSALDTSI GIGLATYLAAALPSLDHACGLGTIRLFQGDVSASPLLPVDGYLRPRRGEVDVEVEESDTD LCPRWSQRLALTVAALVERERS >gi|302034487|gb|GL383264.1| GENE 83 70638 - 72164 803 508 aa, chain + ## HITS:1 COG:ML2270 KEGG:ns NR:ns ## COG: ML2270 COG1165 # Protein_GI_number: 15828215 # Func_class: H Coenzyme transport and metabolism # Function: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase # Organism: Mycobacterium leprae # 1 505 1 538 556 258 39.0 1e-68 MNPSTAVARRLVNALVEAGVEHVVYCPGSRDAPIGYALADAETAGWLRVYVRLDERSAGF VALGVGRAGCPAALVTTSGTAVANIHPAVLEADAAGVPLIVLSADRPAEMWHTGANQTTV QTGIFGSAPRLSTDVPAGFPADERLDALVLRAVTAATGALSADPGPVHLNVSFRDSLVPD GPWQPQALVPRRVSSFPTAPTPLVMPARTVVVAGDGAGSLARELAQQGGWPLLAEPTSGS RVGDNALTDYQTVLGSELVDDVEAVLVLGHPTLSRPVSRLLARPDVTVVTDRSRWTDVAG VARVVTGPVELAEIDTDPAWLGRWKDADRPVVPTAKQRLCRDIWWACTTPNAPVLVIGAS EVIRCFDRFAVPGDIAPTALANRGLAGIDGTIATAIGVGLGTGRPVRVVVGDLTFAHDAM SLLLGETEPEPDVQVVVLDDRGGAIFSGLEHAAAPAPVLRRMFLTPQRLDSAALAHALGA SHRRVSPDDLQFLDEPVVGRQVVSVPLT >gi|302034487|gb|GL383264.1| GENE 84 72137 - 73060 527 307 aa, chain - ## HITS:1 COG:ECs0632 KEGG:ns NR:ns ## COG: ECs0632 COG1169 # Protein_GI_number: 15829886 # Func_class: H Coenzyme transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Isochorismate synthase # Organism: Escherichia coli O157:H7 # 36 289 116 381 391 144 36.0 1e-34 MVPQVLIRRRHLGGPTEVTNHQRLTRRTWGPEPKKHLTRRPAIDEATWTASVTAVTQQLD HDGQLEKVVLAGAVDITSEVPIDRSQVASRLAARFPGCWTYSHDGLVGATPELLVDCRDG LFRCRVLAGTRKPAWAHELLDNPKERHEHELAVASVTGRLAQAGLTDPVIRGPFRLELPN VVHLATDVTARVNGSNAARIVDAMHPTAAVCGTPREASYKLIAQIEHLDRGRFAGPVGWM SSDGSGQWALALRCGQFSEDSRQVRMFAGAGILPTSDPAKEWIEVGAKMEAFGDALPNGQ VSGTETT >gi|302034487|gb|GL383264.1| GENE 85 73006 - 73365 162 119 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3961 NR:ns ## KEGG: HMPREF0675_3961 # Name: not_defined # Def: isochorismate synthase (EC:5.4.4.2) # Organism: P.acnes_SK137 # Pathway: Ubiquinone and other terpenoid-quinone biosynthesis [PATH:pak00130]; Metabolic pathways [PATH:pak01100]; Biosynthesis of secondary metabolites [PATH:pak01110] # 1 92 1 92 401 185 100.0 6e-46 MLNLLPCSDTVSALPGTAWLDEVLHWVPEGVDPWIWLAPDSDDAPAMVGWGVTRRFTASG HGAVESAWRRMASEGQDLFAFGSFPFSRTQEGGGGGPRKGSSWSRRCSSDVVTSGGRPR >gi|302034487|gb|GL383264.1| GENE 86 73569 - 73784 111 71 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGRRDHEIRHSNCGRKDRDPRRGVDISEGQKTSRVDEEWSDMGLDEVNELAERLDVWETP VVHYALDLSAP >gi|302034487|gb|GL383264.1| GENE 87 73979 - 75229 782 416 aa, chain - ## HITS:1 COG:MT0567 KEGG:ns NR:ns ## COG: MT0567 COG0318 # Protein_GI_number: 15839938 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Mycobacterium tuberculosis CDC1551 # 84 402 29 354 362 173 42.0 6e-43 MTPSSSTAPRTGPTTPITSEAVVGSELTSRVRVVRVERTREDVDWLAGRLTEVFDGARSV LVPAGGNELPPAVFQDVEDRTVWLPDEVALVMRTSGSTSGTGRLVGLSATQLRASGTATR ERLGWPCTWVLALPPHHIAGLQVVARAVGDGREVVVVEGRLDAPAVAAAVDEAVNRHDDG RVAISVVPTQLSRLLDDPVGTEALTRCAAVLVGGAAASTSLLSRARKAGVPVRVTYGMSE TCGGCVYDGVPLEGVRVDLTDDSRVRIAGPMIMSGYLDEGPVGPWLATQDLGHWQSGRLV IDGRIDDVINSGGLKIAAGQVLDQIRATGMVRDGLVLGLADATWGQVVTAVVVPGRGWRG PEALRDLVGRRLGRTHAPRVIVEVDELPMLASGKIDRVEVRRITTATLESGAAWRV >gi|302034487|gb|GL383264.1| GENE 88 75171 - 76160 1007 329 aa, chain - ## HITS:1 COG:MT0573 KEGG:ns NR:ns ## COG: MT0573 COG0447 # Protein_GI_number: 15839944 # Func_class: H Coenzyme transport and metabolism # Function: Dihydroxynaphthoic acid synthase # Organism: Mycobacterium tuberculosis CDC1551 # 2 329 11 314 314 380 59.0 1e-105 MSTLPFVSDTFDAARWRDVDLPGDPLTDMTFHRLVSRGESDHAPAGEDLPVVRIAFDRPA IRNAFRPHTVDELYRCIDAARCTPDVAALILTGNGPSPRDGGYAFCSGGDQRIRGAAGYQ YESQETSGDEDLATDARRERVEKGRLGRLHILEVQRLMRATPKPIIAAIPGWTTGGGHSL MVVADMAVASREYARFKQVDANVGSFDAGYGSALLARQIGDKRAREIFFLAETYDAEQAE KWGVINRAVGHAELENTAIEWGLTIAGKSPQAIRMLKYAFNMVDDGIAGQQAFAGEATRM AYMTEEAQEGRDAFLEHRSPDWSDYPYYF >gi|302034487|gb|GL383264.1| GENE 89 76185 - 76706 475 173 aa, chain - ## HITS:1 COG:slr1461 KEGG:ns NR:ns ## COG: slr1461 COG0705 # Protein_GI_number: 16332120 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein (homolog of Drosophila rhomboid) # Organism: Synechocystis # 5 170 24 190 198 129 46.0 2e-30 MAVVVAIMWILEVIDTMLGNTLDHFGIHSWTGQGLWEIFTAPWLHYGWAHLAGNSVPLFV LGMLVYLESTRTWIVSGLTIMVCSGLFAWCFSAPGTITLGASGIVFGWLAYLLVRGLFTK RLHDILIAIIVFLIYGSVLWGVLPGAAGVSWQAHLGGAVGGVISASRLARHSR >gi|302034487|gb|GL383264.1| GENE 90 77161 - 77538 351 125 aa, chain + ## HITS:1 COG:all4257 KEGG:ns NR:ns ## COG: all4257 COG0365 # Protein_GI_number: 17231749 # Func_class: I Lipid transport and metabolism # Function: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases # Organism: Nostoc sp. PCC 7120 # 1 125 89 212 524 145 56.0 1e-35 MDRHLSTARRNNLALIWVGENTDEVRTFSYFALNREVEQMANVLKAMGVRKGDVVTIYLP RIPEIFFAMLACAKIGAVHSVVFAGYSSEALNARIDGSESKVVITVDGSWINGKVFPMKQ IVDES >gi|302034487|gb|GL383264.1| GENE 91 77598 - 77993 270 131 aa, chain + ## HITS:1 COG:sll0542 KEGG:ns NR:ns ## COG: sll0542 COG0365 # Protein_GI_number: 16331700 # Func_class: I Lipid transport and metabolism # Function: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases # Organism: Synechocystis # 6 85 239 316 653 96 57.0 1e-20 MDLTCDHWYDELCKLPIAKGKCETVQVVSEDPLFILYTSGSTGKPKAIVHTHGGYQVGTY ITLKQCFDIKEEDRWWCTADPGWITDTPTSSTARCSTVPPSSCMRAVRRIHTPTAGGSSL STTASLASTPL >gi|302034487|gb|GL383264.1| GENE 92 77903 - 78814 669 303 aa, chain + ## HITS:1 COG:PAE2867 KEGG:ns NR:ns ## COG: PAE2867 COG0365 # Protein_GI_number: 18313648 # Func_class: I Lipid transport and metabolism # Function: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases # Organism: Pyrobaculum aerophilum # 1 303 344 649 670 336 53.0 3e-92 MHEGGPTYPYPDGWWQLIEHYGITSFYTALTAIRTFMCFGDAWVRKHDLSSLRVLGSVGE SINPEAWRWFHDVVGDGTCPITDTWWQTETGMFQITTVPSMPLKPGAVGRPVFGQEAAVV DEEGHELPAGKEGFLVLKNPWPAMMRTLYKDPDRYLEAYWTKYPGVYLTGDSARIDDDGY IWIIGRADDVIKVSGHRIGTAEVESALIFHPAVAEAAAIGLPHEVKRNAIHMVVVLNHSF EPTKNLVSDIRGHVAETLSPIAKPDTIEFVDKLPKTRSGKIVRRVLKARVLGGDEGDLST LED >gi|302034487|gb|GL383264.1| GENE 93 78875 - 79090 99 71 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|315108458|gb|EFT80434.1| ## NR: gi|315108458|gb|EFT80434.1| hypothetical protein HMPREF9602_02058 [Propionibacterium acnes HL030PA2] # 1 71 13 83 83 129 100.0 6e-29 MTGGASDRPTITTPKDLATKLRLQRILPNGCRSHRTDKQVNFANSYGTHILSQPDLADTY SQSMRAWQGHR >gi|302034487|gb|GL383264.1| GENE 94 79489 - 80670 756 393 aa, chain + ## HITS:1 COG:MT2457 KEGG:ns NR:ns ## COG: MT2457 COG0635 # Protein_GI_number: 15841901 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Mycobacterium tuberculosis CDC1551 # 8 392 10 389 390 328 49.0 1e-89 MTHADNSLPELHPADGPWSIYLHVPFCASRCGYCDFNTYVLSAMGDDAVAGYLDAAHQEL ELAADALGDAQPPVSTIFFGGGTPTMLSPVQLGELIDHIRTLWGIDPDAEVTTEANPETL SVEVLAGLLKAGINRLSMGMQSADEYVLTVLDRRHRPGRAVEMAQLARQVGFDDVSLDLI FGAPGENFDSWRHSLDVTLTAEPDHISAYSLIVEEGTRLAGRIRRGELPMTDEDDLADKY LLTEKILTEAGYVNYEVSNWARPRSGRDHRCRHNMAYWLGYDWWGIGPGAHSHVAGTRWW NVKHPATYRNVLGDRVLPVDDYEVLGDVQRHEETVLLRLRLADGLPMADLSEVECMRATE VVEQGLGTMEEGRLVLNLSGRMVADRIITDLLV >gi|302034487|gb|GL383264.1| GENE 95 80824 - 81621 507 265 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3970 NR:ns ## KEGG: HMPREF0675_3970 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 265 28 292 292 525 99.0 1e-148 MPLELGMVIEDPSSGFVGAVVGWQNGLVVLEDRKGKRKSFPVGPGFWVDGRPVNLCIPPR QGSASIKHTASGSIAGGAEPARVALPSRIYVEGRHDAELVEKIWGDDLRHVGVVVEYMGG MDDLVGIVAEFKPGPGHRLGVLVDHLVADTKESRVADEVRRGGYSEYVMITGHRFIDIWQ AIKPQRIGRQEWPEVPMDEDFKLGTLKRLGLPHTTQADVGKAWQAMLARVRDWHDLDPRF NTEMEKLIDFVTRDHVDELDNEEMA >gi|302034487|gb|GL383264.1| GENE 96 81618 - 82379 447 253 aa, chain + ## HITS:1 COG:AGc3406 KEGG:ns NR:ns ## COG: AGc3406 COG0483 # Protein_GI_number: 15889157 # Func_class: G Carbohydrate transport and metabolism # Function: Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 246 3 265 274 128 33.0 1e-29 MSIDVDTVSDLIRDVSARVIDPRFRTLHDHQIHQKKPGDFVTDADRQAECELGAAVTKYA GGIVVGEESAFADPTILDAVSDADLAWVIDPIDGTKNFVHGSVDHGVMLAQLSRGETVRG WIWQPQYGHMWFAEHGAGVTCDGDEVTRGDSHSPVRAATTHEAYKIPSPVVEWRMAKWCC AVDYPLVCQDENDVTVYQHSYPWDHLPGALMVREVGGVVRTVDGAEYGSRETCGKLIVAA DEEAYETVAKLLR >gi|302034487|gb|GL383264.1| GENE 97 82398 - 83069 414 223 aa, chain - ## HITS:1 COG:MT1964 KEGG:ns NR:ns ## COG: MT1964 COG0491 # Protein_GI_number: 15841385 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Mycobacterium tuberculosis CDC1551 # 10 216 5 245 250 100 32.0 3e-21 MSTNPETPQWFALTPRVWTTSVEPGSVTCGLVAGEDHVLLIDTGSTPEQGHTLAMSAARM LGRPVDRIVVTHHHYDHSGGLPGITDAEVWMHEAALAHCPDLHVDHPVSLMAYVNLGGLG AEVIHPGPAHTDGDLIVIVRDEKITFVGDLVETAGEPQSDETTDVRGWPRAIDSVITGTD GAGIYVPGHGQPIDATGVMNQRAQLAERIPTNIPLTDRHLPLP >gi|302034487|gb|GL383264.1| GENE 98 83214 - 84233 778 339 aa, chain + ## HITS:1 COG:ML0624 KEGG:ns NR:ns ## COG: ML0624 COG1420 # Protein_GI_number: 15827254 # Func_class: K Transcription # Function: Transcriptional regulator of heat shock gene # Organism: Mycobacterium leprae # 3 337 5 341 343 291 51.0 2e-78 MLDDRKLDVLKAIVTDYVSSKEPVGSKALVERHGLRVSPATVRNDMAVLEEEGYITHPHT SAGRIPTDKGYRLFVDRIATLKPLSAPERRAIQAFMTGAADLDDIVRRSVRLLAQITHQV AIMQYPVATTGTIRHLELVSLSTDRILIVLIMSSGSVEQQIVELPGHDEQSLAALRTRLN ETLVGLTVAEAADSLNRFLDDLGPAEGPRAASVIATVLEILAVDPSARVVVAGVPNLTAF GAQWETAVRPVLEALEEQVVLMRLLGEATAGEAGEVTVRIGAENTDVPFQSTSLVASTYG PEDALSSLGVVGPTRMDYPSTMAAVRAVARYVGRFLAEG >gi|302034487|gb|GL383264.1| GENE 99 84237 - 85415 769 392 aa, chain + ## HITS:1 COG:ML0625 KEGG:ns NR:ns ## COG: ML0625 COG0484 # Protein_GI_number: 15827255 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone with C-terminal Zn finger domain # Organism: Mycobacterium leprae # 1 390 1 375 378 335 47.0 8e-92 MSNDYYEILGVSHDASADEIKKAYRRKAMKLHPDVAGPGSEEEFKKVQEAYEVLQDPQKR AVFDRGGDPNARMGGFGEGGFSSAGFDFTNLVDAMFGGSSPFGSGGGRGPRSRTRRGQDA LVRMRLSLAEAVFGVTKSLEVDTAVVCPKCQGKGAQSGSEPVTCDTCQGRGEVITVQRSF LGDIRTSQPCPTCHGYGTVIPDPCQECSGEGRVRTTRTINVKIPAGVADGNRIHLDSQGE VGPGGGPAGDLYIEMTVSPHDVFTRHGDDLEMVVTIPMTAAALGTKVLMHTLEADREDFA EDTKTVTVEVPAGTQSGTRIVVSERGVPRLRRNGRGDLGVTFIVQTPTKLDSHQKDLLRQ LAEAREETNASASVEKSGGRGMFSRIKEAFGG >gi|302034487|gb|GL383264.1| GENE 100 85412 - 86152 532 246 aa, chain + ## HITS:1 COG:Cgl2237 KEGG:ns NR:ns ## COG: Cgl2237 COG1385 # Protein_GI_number: 19553487 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 1 241 1 239 241 145 40.0 5e-35 MSDPCFLGEVAAAVPGSVVEITDAEGHHAGSVRRIRVGETVLVTDGQGHAVRGPAIEVTK GSVSVETVEILHTPATTHRWVAVQALPKSDRAELAVATLTEMGVHEILAWQADRSIVRWK GDKQAKGVARWQAAAREATKQSRRFLVPQVELAQTREVVKRICNAQAAYVLHESASEPLV HQELPASGEVIFIVGPEGGITSQEVEAFVAAGARPVTVSDGVLRTSTAGVVGLAQLRAMA NLTVCD >gi|302034487|gb|GL383264.1| GENE 101 86169 - 87215 1022 348 aa, chain - ## HITS:1 COG:alr5117 KEGG:ns NR:ns ## COG: alr5117 COG1063 # Protein_GI_number: 17232609 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Nostoc sp. PCC 7120 # 1 346 1 338 341 171 33.0 2e-42 MKALRFHAPEDVRLEDVPEPECKPDEIKIKVRNCSTCGTDVKILHNGHQNITGVTTMGHE VAGEIVEIGSEVAGDWKVGDWVQSIAAVPCGQCHECRKGWMQVCQNQTSVGYQYDGGFAE YMIVPPQVLKVDGLNRIPDDVDFDEASAAEPFACAINAQEQLGIEKGDFLVIFGAGPIGC MHTRIARGVHKVGTIVMIDINAERLAMSAAAVKPDITIDGSQEDVVAKVMELTNGRGADV IITATPANITQEQALSMAARNGRISFFGGLPKTNPTITCDSNLIHYRQLHIHGANGSAPE HNKRALQYIASGQVPVKDLITRHVKLDDVMTVFDIVAKGEAIKVTVEP >gi|302034487|gb|GL383264.1| GENE 102 87244 - 89151 1262 635 aa, chain - ## HITS:1 COG:VCA1045_1 KEGG:ns NR:ns ## COG: VCA1045_1 COG2213 # Protein_GI_number: 15601796 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannitol-specific IIBC component # Organism: Vibrio cholerae # 17 470 6 478 503 464 51.0 1e-130 MSLPDATIHKNLQGHGARASVQRLGGFLAGMIMPNIGAFIAWGLLTALFIETGWAPNATL AKLVNPILTYLLPVLIGYTGGKIVNGTRGGVIGAIATMGVVVGADITMFLGAMVIGPFAA WLLKQVDKLLDGRIHSGFEMLVDNFEIGILGMALAVIGHLGVEPLVSTLMGWLAAGVGFL VHHGLLPLASLLVEPAKVLFLNNAVNHGIFTPLGIQEAHITGRSILFMVESNPGPGLGLL LAYQFFGSRQIRQSTPGAIIIHLFGGIHEIFFPYVLMKPKTILATIAGGMSGLAIGVAFH AGLVAPASPGSIIAWFLMCQPGHYLAMVADFLVATAVSFVVAMLLIRKNSTQDDVAGEGQ NPTVPTTIGAQAPLTNISKVVIACDAGMGSSVMVASTMKNRLSRYGVEVAHTAVDQIPSD TPLILTQEGLVDRARRRAPSARIVPFTNYMNDPAFDRVETEVRAAHDDAATAPTDNGGLS RASDANSHTHVAISVLPRDAIRLGQRATSKEEAITMAGQVLIDEGAADDVYVKGMLAREK QISTYMGEGVAIPHGVDEVRDHIDKATLGFLQFPEGVEWDGNICTVVIPIASSSDEHLEI MAALARILSNPETARQLREATCTDEVLNLLGSQQA >gi|302034487|gb|GL383264.1| GENE 103 89342 - 89743 387 133 aa, chain - ## HITS:1 COG:Cgl1340_1 KEGG:ns NR:ns ## COG: Cgl1340_1 COG2259 # Protein_GI_number: 19552590 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 8 130 6 132 142 64 32.0 5e-11 MSLAKFTARSLLSAIFITGGLDEIKKADQLSEAVDGLLSKLPKSSCSQIPDVDSTLLVKV NGATMLAAGSLLALGIKPRLAATVLAAQLVPVTAAGHAFWEKEGAEKQGDQIQFCKNLGL IGSLLTVALDGAK >gi|302034487|gb|GL383264.1| GENE 104 89905 - 92055 951 716 aa, chain - ## HITS:1 COG:Cgl0869 KEGG:ns NR:ns ## COG: Cgl0869 COG0514 # Protein_GI_number: 19552119 # Func_class: L Replication, recombination and repair # Function: Superfamily II DNA helicase # Organism: Corynebacterium glutamicum # 31 713 20 680 683 611 50.0 1e-174 MTTTTDAIPKVDDLRTQGVAILRRLVGRNNADFHPGQWEAIEALVAHHRRALVVQRTGWG KSAVYFVATLLQRAIGSGPTLIVSPLIALMRDQVAAAKRASVRAAAISSANATEWSEIAQ RLDADELDVLLVSPERLVNPTFASRQLPELIKRMGMLVIDEAHCISDWGHDFRPDYRRIR NLVSALPVTIPVLATTATANSRVVQDVAEQIAPSADDVFILRGPLARKSLRLGVLNLPNP SERLGWLVQHLSELPKSGIIYCLTVSTAEDTARALTTAGHNVRAYTGRTDAEARTELEKA LRNNQVKALVATSALGMGFDKPDLGFVVHLGAPSSPIAYYQQVGRAGRATDNADILLLPG PEDPDIWTYFATSSMPTQERADAVLRALAGGQALSISALETRVDIRRSQLELLLKVMAVD GSVVKVRDGWQATGKPWVHDTERYERISQARREEQQAMLGYERSRTCRMTLLTGQLDDPS TTPCGRCDVCAGPWYSVEVDQSAAVRAVQSLNRVGVPVEPRTAWPVGMDALQVALKGRIS AEEIAAEGRVIARLSDLGWGGALRDLLRSDTNGVPIDAEITPALAKACLRVLAEWDWEQR PAAIVRIPSITRPHLIDSLASGIARVGHLQDLGWLDLADGSARLQSSTNSAYRLRDVHDR FSVGPGLMSRLSHLGGASVLLIDDVISSRWTMTVAARSLRRAGSGPVLPLALALTA >gi|302034487|gb|GL383264.1| GENE 105 92138 - 93355 829 405 aa, chain - ## HITS:1 COG:TM1629 KEGG:ns NR:ns ## COG: TM1629 COG1207 # Protein_GI_number: 15644377 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) # Organism: Thermotoga maritima # 13 228 230 420 445 70 29.0 7e-12 MDVNSRVLEPRGLEKVAKLIDRGVRIPNPLTVDIDEAVDIDNISSDGVVIGPGCRIRGRR TVISAGCILGDEAPMTIQDCQLGTGVKLKGGFAQDAVFLDGASMGSGAHVRGGTILEEEA NGAHTVGLKQTILMPFATLGSLINFCDVLLAGGTSRTNHSEVGSSYIHFNFTPDGDKTTA SLFGDVPRGVLLDRHPIFLGGQGGAVGPVATGFGTVVGAGSILRDDVPEDDQLVLPAPPA TRQRPVAPNSYSKLNRIIAHNVSYLGNLSALEAWYRQIRRLFMSHDRLSGLVWQGALDNL VSARKERVKRLKSLIGKVQPTDAGRAQLIDNRDAFLSSLETADSPAPAEIVRLCGAAANS GANYLDVIQSFDEAARNQVVEWLGTIVTAQQDRAQEVVDQLPLPF >gi|302034487|gb|GL383264.1| GENE 106 93398 - 94249 738 283 aa, chain - ## HITS:1 COG:DR1295 KEGG:ns NR:ns ## COG: DR1295 COG5006 # Protein_GI_number: 15806313 # Func_class: R General function prediction only # Function: Predicted permease, DMT superfamily # Organism: Deinococcus radiodurans # 11 272 27 287 302 142 44.0 1e-33 MVAFVRGAILVFMAILSVQFGGAFAATLIPHVGALGTVALRMSLAALVLAPIFRPHVKGH NRVDWTRVLALTIALAGMNTVFYFSLERLPLGVAVTAEFLGPLGMAALGSRSLRDWLAIL LALCGVVAVSGALTADWAHLDLLGLVLALVAGVFWALYAKSAQLVGMSWSKLEGLWWAIL LSSVVLVPFGFATAGTRLVEPYHLLTGAVVAVMSSALPYSLEMYALRHIDTTVYGILTGV EPAVAAAAGFFILGQNLTGSQMLGMAFVVTAAWLVMAGGRQRE >gi|302034487|gb|GL383264.1| GENE 107 94336 - 95577 1111 413 aa, chain + ## HITS:1 COG:Cgl0233 KEGG:ns NR:ns ## COG: Cgl0233 COG0343 # Protein_GI_number: 19551483 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Queuine/archaeosine tRNA-ribosyltransferase # Organism: Corynebacterium glutamicum # 16 405 21 415 418 496 60.0 1e-140 MTFGFEVTSRLDNACGRTGLIHTPHGAIQTPAFVVVGTKATVKALLPESVVQLGAQAVLA NAYHLFLQPGPELIDEAGGLGQFMNWTGPTFTDSGGFQVLSLGAGFKKTLAMDVSQLTEA DVIAADADRKAMVDDDGVTFRSPLNGDLHRFTPEVSMGIQHHLGADIMFSFDELTTLMNT HAYQEEALERTRRWAERCLAEHRRLTEVRSGKPYQALFGVIQGAQYQDLRRRACRDLAGM EIDGQCFDGFGIGGAIEKANLGRIVTWCAEELPEDRPRHLLGISEPDDLFAACRAGADTF DCVNPSRVARNAAIYTVDGRYNVDTARFRRDFGPLEDDCDCYTCTHYSRAYIHHLFKAKE LLANTLATIHNERWTVRLVDQIRGAMCSGDLDAFETEFMGRWNANGGRLAKVN >gi|302034487|gb|GL383264.1| GENE 108 95625 - 96974 983 449 aa, chain + ## HITS:1 COG:CAC2940 KEGG:ns NR:ns ## COG: CAC2940 COG4585 # Protein_GI_number: 15896193 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 119 432 78 390 402 89 26.0 1e-17 MPLVTLGGVRESIVSFMAMDDLWRRRVPEHKGWQIPVVWFLPAVDVLVGALVALAVGAGG LLLAALQDHLDTLGPGDVIVVIVLAVALSFRRVMPITSAAVMTLVWINGTYATPYMATNW VSTLAFFFSYYSLMVWVRTRRIAWGSMLAVFVVIMGWVAMMMAFGRSLTEQLKIINPDSN GEGVIYLVLTYVIVNVTFVVGAALVGQVSWLWARDLAEVRRQAATIERQRTQLAEQAILD ERLRIAREMHDSMAHHVSVVGIHAAGARRAFDVDPDLAREALATVEVESREAVTEMRSLL GSLRAGDEPRARLSLADLDRLCNEPRRASVRLLRVGDDSLVGPQLGHTCYRIVQESLNNV EAHSSASEVTVSVRCRDDEVEVEVTDNGRPIRSAPSTEVGIVGMSERVKALGGTIEVGPR KIGGWRVRAVIPMRRGENVRDEDMKEGED >gi|302034487|gb|GL383264.1| GENE 109 96974 - 97630 704 218 aa, chain + ## HITS:1 COG:all4635 KEGG:ns NR:ns ## COG: all4635 COG2197 # Protein_GI_number: 17232127 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Nostoc sp. PCC 7120 # 1 204 2 208 219 177 45.0 1e-44 MRVVLVDDQKLVRQGFRLILAVEPDITVVGEATNGAEGVDVVKETAPDVVLMDVQMPVMD GVAATAKIREFSDVKVVILTTFDRDDYLFDALDAGASGFMLKNADAESLVAGLRQVADGH ALLAPEVTRRVIARSVQQGGTVTGSKAEQLTAREIEVAKLVARGLSNAEIAEELVVSAAT VKTHVSNCLMKCDLRDRVQLVALAYESGLIRVGEPSRD >gi|302034487|gb|GL383264.1| GENE 110 97715 - 98647 265 310 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 13 265 4 261 305 106 27 2e-21 MIDTDMCHREPVSVRVEELIRAFEDLVAVDHLNFDIPAGRMTGFVGANGAGKTTTMRMIV GVLKPTSGQVLWSGRPITAEDRRTIGYMPEERGLYPKQPVIDQLVYLARIKGASTQTART EAMEYLDRFGLADHAREQVQKLSLGNQQRIQVTASLLADPAVLILDEPFSGLDPVAVDAM ADVLREKTAQGVPVLFSSHQLDLIDRLCDRMVILHKGRMVANGTTEELREVGPRRYRVEA RGDLGWLRSLPGLTVVDVDGTTAVIEFPDPNQIDRLLDVIVTESMNRGGLVELTHIRPSL GEIYREAAQS >gi|302034487|gb|GL383264.1| GENE 111 98644 - 99855 862 403 aa, chain + ## HITS:1 COG:BS_yhaP KEGG:ns NR:ns ## COG: BS_yhaP COG1668 # Protein_GI_number: 16078054 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: ABC-type Na+ efflux pump, permease component # Organism: Bacillus subtilis # 19 393 15 408 419 119 27.0 1e-26 MTNTSSAWRLVASREVDVKLRDKGFIISMIITVLLIVAISVVLSIISSKHDHDSVVVTDD KAAAIVKVAQQDLAARGSTDKTEVVRAADEAEAHRELQNDDNMVYLHQKDGQWHLDGYDK TPSADGSSTGAMERAVAVAAVADNTKAAGVDASTMTKGMSLQTGQVKPSDGTSEAVGYML AIVFSVLFMMSAIYYGVMIANSVVEEKQSRIVEILLTGVPARQLLIGKIVGNTVLAVGQL IIICGLSMLAVSFSQWSNIITFAMSWSVMWFLLFFLVGFVALASLYAAAGSMASRSEDVQ NTTSPLMYLIMIIYFWVVFSMSNPDGMSAKIGSYVPIASVVFMPLRMLGHRAQWWEPIVS IFVTLGFTVFAVLAGERIYRRSILQTNGRVSFKNAWKQNESVA >gi|302034487|gb|GL383264.1| GENE 112 100037 - 100666 533 209 aa, chain - ## HITS:1 COG:Cgl0234 KEGG:ns NR:ns ## COG: Cgl0234 COG1738 # Protein_GI_number: 19551484 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 4 197 53 243 250 165 44.0 5e-41 MCVVVILSNIGGSKGVQLGPITTDSGFFLFPLAYVMGDITTEIYGIKAARRAIVMGFICA ILSVLCFWAIIALPGFTDTYSVAHDTALKMALGPLWQMVLAGACGFLAGQFTNSVIMVRL KAKWLERGLVGRLMGSTGAGEAVDTIIFCAIAAPVVGITSFGQWCNYAFFGFLWKTLVEY ACIPITTRIIAWIKKHEPSYQERLAVARN >gi|302034487|gb|GL383264.1| GENE 113 100827 - 101834 949 335 aa, chain + ## HITS:1 COG:XF1510 KEGG:ns NR:ns ## COG: XF1510 COG0596 # Protein_GI_number: 15838111 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Xylella fastidiosa 9a5c # 14 332 2 312 313 334 53.0 1e-91 MTLATSELDITPHRDLYPPIEPYNTQMVDVGDGQQLYVEQCGNPEGKPVVFLHGGPGGGG GTERRRFFNPDAYRIIILDQRGCGLSTPHIAQAHTPREMATNTTWKLVEDLEKIRELLGI ERWEVFGGSWGSCLSLAYAETHPERVTELVLRGIFTMREQELDWYYNFGASEVFPELWNK FCEPLRRVGHDFSRDNIAAYYDLLWDDDPDVHGPAAVAWTTWEGVTTSLSFDPSHIEEFS DPNFALAFARIENHYFVNHGFMVEGQLLRDAHKLADIPTVIVQGRYDMCCPDVTAVDLSR ALPSADLRIVMAGHSAFEPLIASELVKVCDEFAER >gi|302034487|gb|GL383264.1| GENE 114 101968 - 102381 332 137 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3990 NR:ns ## KEGG: HMPREF0675_3990 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 137 1 137 137 265 100.0 5e-70 MSARKEFGGVITFIVHPDFIRDNRFYPVIPKTIQMVINEAATRPEKLYFIDQDTSAPVKN TDSEMLVMDVSVFTVGRNLDNLVVMINLGKYWGSGPDDVPRAVIRTLSRPLSAIMFEEIP EPPLDKNEEGYYSFILT >gi|302034487|gb|GL383264.1| GENE 115 102401 - 103534 403 377 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_3991 NR:ns ## KEGG: HMPREF0675_3991 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 377 1 377 377 736 100.0 0 MGLGWLDDAAFALGTELSLNKVLHEGVRTSVARCWVDGSTTATAGARTVIAKCFRSTSMS HNSGGLGIVREIAGLGCLPEAPRLYAADLSLGVVVMGDVSGMTLESILTGNDPSAALIAA QMWGRATATVMAASMREMSDRAARDEVIPAFQDTIRRLDPQTRSAGGPASPRLPGRGLEK MCAALETEVPDDAELDLFESLRGAEGTEVVTQADPCPGNVLVTEDHARFVDYEATSIHHP AVDVVNLVMPWSSCDGLVGVPAEFLDAVREGFLDGSRYAGSWLADEPMIGLAGTAATLQL TELSLDSLRRHHPNQRGDMARRAMVHRWTWAATHGVLTPIIADLCGRMAHRAVQDWGWSK HLTVANCFSHEKLRNQR >gi|302034487|gb|GL383264.1| GENE 116 103703 - 104647 788 314 aa, chain + ## HITS:1 COG:MT2437 KEGG:ns NR:ns ## COG: MT2437 COG1702 # Protein_GI_number: 15841880 # Func_class: T Signal transduction mechanisms # Function: Phosphate starvation-inducible protein PhoH, predicted ATPase # Organism: Mycobacterium tuberculosis CDC1551 # 1 295 32 328 352 395 69.0 1e-110 MVTLVGPNDEFLKRLEDALDADILVRGNEIHLAGHPADLADAGDILSEMITIIRTGQGLS ADDVDRVVAMTRNGEGPAEIMTADILSNRGRTVRPKTLNQKRYVDAIDANTVTFGIGPAG TGKTYLAMAKAVQALQTKQVSRIILTRPAVEAGEKIGYLPGTLSEKIDPYLRPLYDALRD MVDPDTVPRLVGAGTVEVAPLAYMRGRTLNDAFVILDEAQNTSSQQMKMFLTRLGFGSKI VVTGDITQVDLPGGMKSGLRVVQGILDGIDDIAFCNLTSRDVVRHRLVGKIVAAYDVACE SRGAKNSRKNRKTR >gi|302034487|gb|GL383264.1| GENE 117 104644 - 105111 413 155 aa, chain + ## HITS:1 COG:Cgl2235 KEGG:ns NR:ns ## COG: Cgl2235 COG0319 # Protein_GI_number: 19553485 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Corynebacterium glutamicum # 2 153 3 158 196 124 47.0 6e-29 MIDITNESGSPSNEEGLVGLATFALDWLRIHPSSELSIILVDEETMEAYHEKFMGLPGPT DVLSFPMDEMRAPGDDEDPPSGLLGDIVLCPTVTARQAAENGRTPDGEAEYLLIHGLLHL LGHDHAEPGEKRVMFRLNDEIIAAWDDHREQTGQR >gi|302034487|gb|GL383264.1| GENE 118 105108 - 106406 1010 432 aa, chain + ## HITS:1 COG:Rv2366c KEGG:ns NR:ns ## COG: Rv2366c COG1253 # Protein_GI_number: 15609503 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Mycobacterium tuberculosis H37Rv # 12 432 10 430 435 364 47.0 1e-100 MTRQEWIVLAIAFIFTVLASLNVAMETALQHMSHSKAEELAADGKAAHQRVLDMVADPAP FINTAMLVRVISEVTATALVALLIFGHFDLPWQQVLVVVAIMVLVDFLTWGVAARTLGRQ HDTAICTFWSRPWGVLAHVLGPIAALLILIGNALTPGKGYAEGPFTSEAELREMVDYAEA SDLIEAGEREMIHSVFELGDTLTKEVMVPRTDVVYIPRTKNLRQAMSLALRSGFSRVPVV GEGFDDIRGIVYLKDLSQRVLDNPDGYATESVESIMRPAALCPDSKPVDQVLREMQRDRN HLVIVVDEFGGTAGLVTIEDIVEEIVGEIVDEYDAEPTLTEEIEDGVFRISSRLPVDDLG ELFDLKVDDDDVETVGGLMAKELSVVPIPGSVIIWEGLEITAEKATGRRHQVDTCLVKRA PEETPDQEYDDE >gi|302034487|gb|GL383264.1| GENE 119 106399 - 107421 832 340 aa, chain + ## HITS:1 COG:ML0631 KEGG:ns NR:ns ## COG: ML0631 COG1159 # Protein_GI_number: 15827260 # Func_class: R General function prediction only # Function: GTPase # Organism: Mycobacterium leprae # 36 340 4 302 302 335 58.0 7e-92 MSDDEMPSLADLMDGDDEDISDVDYVTARVAESTRAGFHSGFVCFVGRPNAGKSTLTNAL VGSKIAIASSKPQTTRHVIRGVVTDEKSQIVVIDTPGLHKPRTLLGQRLNDLVFDTWTQV DVIGVCLPSNQRIGPGDTYLVSEIAELPRRPTLIALATKSDLVSKARMAEHLAAIDKLQG EVGIEFVEVVPCSAVSGEQIDEVRDVIASLLPEGPAYYPDGEVTDEPTETLVAELIREAA LEGVREELPHSLAVEIVEMGPREGQPEDRPLLDVYASLIVERDSQKGIMIGHHGSHIKQV RTHARRQIAALLGTPIHLDLQVKVLPNWQSDPKYLNRLGF >gi|302034487|gb|GL383264.1| GENE 120 107450 - 108940 743 496 aa, chain - ## HITS:1 COG:PAB1657 KEGG:ns NR:ns ## COG: PAB1657 COG1574 # Protein_GI_number: 14521281 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase with the TIM-barrel fold # Organism: Pyrococcus abyssi # 23 448 23 442 476 152 28.0 2e-36 MLLLHNARILDLTDGSTGKPTDVLLSDRVLALGPEAQQQAHSARVRSIDLGGRLLMPGLW DEHVHVGQWALASRRFLVSQTASCETVLEEVATHVKRSEGSDEPILQGFGFRPSLWGSNP NARQLDAVTGDRAVILVSADLHSSWCNTAAMRKLGIEGDGFLREQTSFDVQTQLSQVNPH VLDGWVGSCSTAAARLGITGIRDMEFSTDVETWLQREADGRCPLRVEVSVYPERLDEAIA QGLATGQAPVTDKPGPSRVAMGPLKVIVDGSMSTRTAWCMDSYPAGAGPDGAGIDSVTPE DLVDLINRAKTGNLQCAAHAIGDRAAKEVLNAFEVTGISGSIEHAQVLTDADVRRFAALG VRASVQPLHLVDDRDATDVMWSDRADRCFRFADMVRAGTELALGSDAPVSPVDPWGAIRV AVERTGDRRPSWHPEQALTLSQAITASTRHVTQVVTGGPGDVIAVAHNPFDLSGDALAGL TSDLTVVGGEVTAAAL >gi|302034487|gb|GL383264.1| GENE 121 109142 - 110887 1286 581 aa, chain + ## HITS:1 COG:ML2324 KEGG:ns NR:ns ## COG: ML2324 COG0119 # Protein_GI_number: 15828249 # Func_class: E Amino acid transport and metabolism # Function: Isopropylmalate/homocitrate/citramalate synthases # Organism: Mycobacterium leprae # 10 572 39 604 607 627 56.0 1e-179 MTHIQPRPCQLTSPMPSGRYKPFVPHKLPDRTWPDKTLGDAPRWLSTDLRDGNQALVDPM TPARKMRMFELLVGMGYKEIEIGFPSASQTDFDFVRQVIESGIVPDDVTISVLTQAREDL IERTMQSLVGAHRATIHMYNAVAELFRRVVFNIDEKQCIDLAHRGTEWVVRYADKYLGDV EFGYEYSPEIFSQTRTDFAIEVCHSVMDVWQPGPGREIILNLPATVEMGTPNTYADQIEY FCRNIRDREHVCVSLHPHNDRGTAIAAAEFAQMAGADRVEGCLFGHGERTGNVDLVTLGM NLVSQGVDAGIDFSDMPKIRRTVEYCTGLPVPARQPYAGDLVFTAFSGSHQDAIKKGLED LERQAQEQGIGIHEVDWQAPYLTIDPHDVGRTYEAVIRVNSQSGKGGMAYLLKTEHQVDL PRRLQIEFSGAVQNYTDDQAREISHDEIWDLFNREYLQVPGIKLVSRMTSTETGTHQLTA NLRIDGEDVQIRGEGNGAVSAFIDALASLDIVVQVLDYSEHAMTAGGTAKAAAYVECEIG DGETSQILWGVGIDPDIAQASLNAVVNAVNRSRRQTLDRES >gi|302034487|gb|GL383264.1| GENE 122 110896 - 111702 567 268 aa, chain - ## HITS:1 COG:Cgl2231 KEGG:ns NR:ns ## COG: Cgl2231 COG0020 # Protein_GI_number: 19553481 # Func_class: I Lipid transport and metabolism # Function: Undecaprenyl pyrophosphate synthase # Organism: Corynebacterium glutamicum # 23 259 7 243 243 348 69.0 4e-96 MARITPRPPKRGPLPHPSGARPPELPPELIPQHVAIVMDGNGRWARQRGLRRTEGHARGE DALFDVIEGAIEMGIPYLSAYAFSTENWKRSPDEVRWLMGFNRDVIHRRRDQLDAMGVRI RWAGRRPKLWKSVIKELESAEKQSTDNTVLTLQFCVNYGGRAEIVDAVRDIARLAAEGKI DPDHITEKTFRTHLDEPEVPDVDLFWRSSGEQRTSNFLLWQSAYAEMVFSDVLWPDVDRR DLWAAVVEYAKRDRRFGGAVPYEVNPTP >gi|302034487|gb|GL383264.1| GENE 123 111804 - 112469 468 221 aa, chain - ## HITS:1 COG:no KEGG:PPA0943 NR:ns ## KEGG: PPA0943 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 221 1 221 221 385 100.0 1e-105 MDSFVALLGSVWYLVLVAAISPVMILNANAAVHGQKQNHGWAFVSGAGLVLGAIGVTSFG LLGSAATDFASRQLASRTVDRVLGVLLFLFGCYLARTKWVSHRVQKSRVKKTSGPRSAGA HGMFTWGALGMATNFTTIPLFISSSQRIGTADLPLVVRILTLIISWWIVLIPAWLPVVID RLRPNSSGISGRTRERISHWTSVASIIACLGSGIIIVWTTL >gi|302034487|gb|GL383264.1| GENE 124 112591 - 113331 442 246 aa, chain + ## HITS:1 COG:MT2431 KEGG:ns NR:ns ## COG: MT2431 COG1381 # Protein_GI_number: 15841874 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Mycobacterium tuberculosis CDC1551 # 1 246 1 242 265 234 48.0 1e-61 MPTYRDQAVVLRTHKLGEADRIVSMLSREHGKIRAVARGIRRTSSKFGARLDPFNLVDLQ LVQGRNLDVVAQVECLHPYSAPLRQDYSLFTAAEVMVEAADHLVPVDREPAPAQYRLLAG ALRVLGQGTTDGPRPPEMVLDSYLLRSLSASGYAPDLVDCVRCGTPGPHQGFSPSLGGVV CINCQPPGTPHPHEETISYLRALLVGDWTATRDVAWSRVREGSGLVAAFVSWHMDRGLRS MPLLER >gi|302034487|gb|GL383264.1| GENE 125 113429 - 114412 524 327 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4001 NR:ns ## KEGG: HMPREF0675_4001 # Name: not_defined # Def: histidine kinase # Organism: P.acnes_SK137 # Pathway: not_defined # 1 327 9 335 335 548 99.0 1e-154 MAALLCWKHPLVQELLLLVGLVSSAIAGDIAFSIPLLVVLAFLASQHGLKRHCIPLIIGA TVIAAMAAVYTERWVSIFLVACLACAIGIGFGSAFRWLDNRREQAEEQAADALQQAAHAR EEERQQLAAELHDVVAKDLTVITMLAGSLRLNTANEDVITASKSIENTSRAALDDLQRLL LVLRNRNLPFISSPTHEDSVEATVAAMVTRLETLGWHVESSVACAPMPVSVSDAINRILD ESTANVIKHNGPATARITVMDEGDDVVVTVSNPTTDPEIEPVRSTGMGIARLKERVSLLR GKISIGLRNGWWVVNARIPRAKPVRET >gi|302034487|gb|GL383264.1| GENE 126 114646 - 114831 195 61 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4002 NR:ns ## KEGG: HMPREF0675_4002 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 61 3 63 63 109 100.0 3e-23 MKKIITGIVAVLAISSFSVAVPAQATTDSAPTQNAVNTQPKAHVKGIIDGLCTLYPDWCF N >gi|302034487|gb|GL383264.1| GENE 127 115175 - 115846 522 223 aa, chain + ## HITS:1 COG:CAC1455 KEGG:ns NR:ns ## COG: CAC1455 COG2197 # Protein_GI_number: 15894734 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Clostridium acetobutylicum # 3 217 2 218 225 139 34.0 4e-33 MSVRLVVTDDHPIMRQALAGYFSRVEEMEVVGQATNGREAVELVDQLLPDVVLMDLKMPE MDGLTATRMIVSRHPSVRVVALTTFARRDIVVEAILAGAAGYLLKESEPEAVIAGVRAVM AGQVTVSPEIARGVVEVFSARPCGGGSHQIDLTPVKLSDADDDVLKLLAEGLSNAAIADE LCLSESAVKQRLGHLAKKLGVRSRLEVLVRACELGLVIPRLRR >gi|302034487|gb|GL383264.1| GENE 128 115847 - 116263 274 138 aa, chain - ## HITS:1 COG:MT2428 KEGG:ns NR:ns ## COG: MT2428 COG0735 # Protein_GI_number: 15841871 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Mycobacterium tuberculosis CDC1551 # 7 131 7 130 130 125 48.0 2e-29 MVENRRRTTKQRLAIRALFDDEPFFLTAQQVHDQLRNRGDQVGLATVYRNLQTMAEDGEL DAIRAEDGEMTYRRCSSAHHHHLVCRNCGKAVEIGPEKILEDWTRDIAAKYEFSETGHEL ELFGICSECSAVHTRSVS >gi|302034487|gb|GL383264.1| GENE 129 116485 - 117876 1245 463 aa, chain + ## HITS:1 COG:MT2426 KEGG:ns NR:ns ## COG: MT2426 COG0423 # Protein_GI_number: 15841869 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase (class II) # Organism: Mycobacterium tuberculosis CDC1551 # 7 462 9 462 463 736 74.0 0 MASTSTLDNVINLCKRRGFVFPCGEIYGGTRAAWDYGPFGVELKENIKRQWWRAMVTRRD DVVGLDSSVILPREVWVASGHVGVFNDPLTECLSCHKRMRADHLQEGHAAKHGIADSDSI SLEEVNCPNCGNKGQWTEPRDFNMMLKTYLGPVEDKSGLHYLRPETAQGIFVNFQNVLTS ARKKPPFGIAQTGKSFRNEITPGNFIFRTREFEQMEMEFFVEPGTDEEWHQYWIDVRTAW YTDLGINPDNLRHYEHPKEKLSHYSKRTVDVEYKFGFSGSDWGELEGIANRTDFDLGNHS RHSGKDLSYYDQANNKRYLPYVIEPAAGLTRSLMAFMVDAYTEDEAPNAKGGVDKRTVLK LDPRLSPVKAAVLPLSRNSDLSPKARDLAARLREHWNVDFDDAQAIGKRYRRQDEIGTPF CITVDFDSLEDDAVTIRERDTMAQQRVSIDKVEEYLGGKLLGC >gi|302034487|gb|GL383264.1| GENE 130 118016 - 118786 495 256 aa, chain + ## HITS:1 COG:no KEGG:PPA0950 NR:ns ## KEGG: PPA0950 # Name: not_defined # Def: putative succinate dehydrogenase subunit C # Organism: P.acnes # Pathway: Citrate cycle (TCA cycle) [PATH:pac00020]; Oxidative phosphorylation [PATH:pac00190]; Butanoate metabolism [PATH:pac00650]; Metabolic pathways [PATH:pac01100]; Biosynthesis of secondary metabolites [PATH:pac01110]; Microbial metabolism in diverse environments [PATH:pac01120] # 1 256 1 256 256 455 100.0 1e-127 MSVPDVRDRRDLERGGDAVAVHTHSAARPSNVTLKLIMAITGTIFALFVFVHMVGNLKAF MGPGDYNAYAEFLRTVLYPLFPVGGVLWCFRIVLLVCLVLHVWAGLTIWVRGRRARGRFS RHNMKALGWGARTMVLSGIVILAFVVVHILDLTLGMGVQSSSFRAPVNEGTPDIHITAYQ NLVASLSRPWMAIFYTVVMIIIGLHIAQGVRNTINDFGGTGRRLRAIWTVIGLLIALAIV VCNGALPMLILAGVIS >gi|302034487|gb|GL383264.1| GENE 131 118783 - 120915 1560 710 aa, chain + ## HITS:1 COG:Cgl0367 KEGG:ns NR:ns ## COG: Cgl0367 COG1053 # Protein_GI_number: 19551617 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Corynebacterium glutamicum # 73 710 25 673 673 785 61.0 0 MNNWIEAVKKPLEMITGRHAGARPEEPGAELVKPEQLQPRRAESSSVARRAAKGPKARDI LGPAQKKAGYLVGDELDGKAPEGDPLTAWTRRQSEYKLVNPANRRKMNVIVVGTGLSGSG VAATLGQLGYHVDVFCFHDSPRRAHSVAAQGGINAARARKVDGDSLKRFVKDTVKGGDYR GREADVVRLGTESVRVIDHMYAIGAPFAREYGGQLATRSFGGVQVSRTYYTRGETGQQLE VACSQALQAQIDAGSVTMHNRTEMLDLIVADGKAQGIVTRDLLTGEIKAWTAHVVILCTG GYGSVYHWSTLAKGSNATATWRAHRQGAYFASPCFVQFHPTALPVSSHWQSKTTLMSESL RNDGRIWVPKKAGDDRPANDIPEEERDYYLERKYPAFGNLTPRDVASRNARTQIESGHGV GPLKNSVYLDFRDAIERLGKKTIAERYGNLFDMYLDATGENPYEVPMRIAPGAHFTMGGL WVDYDQMSTIPGLFVGGEASNNYHGANRLGANSLLSASVDGWFTLPLTVPNYLAGFVGKP VLPLDAPEVSAAIERVQKRTDALLNCGGTHRPEWFHRKLGDILYEGCGVARDEAGLLDAL TKVRELREEFWRDVKVVGTGNRLNQELEKAGRVADFIELGEVMILDALDRRESAGAHFRN EYATEAGEAKRNDGDWCAVSAWETRPDGTKVRHSEPLSFSLIDLQVRDYR >gi|302034487|gb|GL383264.1| GENE 132 120912 - 121670 427 252 aa, chain + ## HITS:1 COG:Cgl0368 KEGG:ns NR:ns ## COG: Cgl0368 COG0479 # Protein_GI_number: 19551618 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit # Organism: Corynebacterium glutamicum # 1 246 1 246 249 293 55.0 2e-79 MRVELDIWRQNGPDAKGHFEHHVVEDAEPEWSLLELLDRLNDQIVENDGDPIVFESDCRE GVCGCCGFMVNGKPHGPLPNTPACRQHLRAFPHITHFKIEPFRSAAFPVIRDLAIDRTSM DHLIQAGGTVDVMTGTAPDADSVPQPHAEAEQALDFASCIGCGACVAACPNGAAMLFAGA KLSHLAMMPQGRQERSKRARRMINALDEEFGPCSLYGECVEACPVSIPLVAVARVNRERW RAGFRGAGSKDN >gi|302034487|gb|GL383264.1| GENE 133 121869 - 123635 1134 588 aa, chain - ## HITS:1 COG:SMc00166 KEGG:ns NR:ns ## COG: SMc00166 COG0778 # Protein_GI_number: 15965594 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Sinorhizobium meliloti # 50 247 26 224 227 170 41.0 6e-42 MIIPDENPSTSRRWDRPIPRIGDTTSSATRAAAPTGWSLGDQVQQGLDTAIDTRRDIRRY RHDDVPKELVNTVLWAGHRAPSVGHSQPWRFIVVRDADIRDRAAVMADRERLRQAELLTP DRRAHLLDLQLEGIREAPVGIVVACDRRAPASGVLGRNTFTDADMWSCACAVENMWLTAR AHGLGMGWVTLFQPEELAELLHLPNDVETLGWLCLGWPDERPPAPGLERRGWSRRVPLSD VTLADRWPDSAQPEAPVSALRQTLHSPNRYQVVAAHDDADQLLTPPGSLGLLDQTLDRVE AAGGTEITGGTLVLVGADHPVAHLDVTAFEASVTHDVMAASVAGTGLGVSTATAAGLSHL VVDAGVAQPVQGARSVRIRGERGDLRHADAMTPVQVEALLRDGQALGAEASHDGLVCLGE VGVGNTTIATALACAMTGLGPDEAVGLGAGSDTAMVERKAEIIKAALTRTHTDPNDPERL LAALGGPEFAVLAGVCLGAAEAGSPVVLDGLATSVAALIATKFSPGLHGWLVASQASREQ VHHIVLAELGLEALMELRMRAGEGVGACFGAQMILTGLQVRRTAARTC >gi|302034487|gb|GL383264.1| GENE 134 123794 - 124918 447 374 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148828154|ref|YP_001292907.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae PittGG] # 7 310 4 304 326 176 34 1e-42 MIAPSGGTVSVDTPVVLAPMAGVTNAAFRQLCAEQGAGLYVCEMITSRGLVYGDHKTHGM LAFAECEDVRSVQLYGVDPGMVGEATSILCEKYGVNHVDLNFGCPVPKVTRKGGGGVLPW KLDRFAAVVSAAVQAGDAHGVPVTVKTRIGIDPEHITYIDSARAAVDSGAAAVCLHARTV AEAYAGHSHWDAIGELVKTVDVPVIGNGDIWEASDATAMVGQTGCAGVEVGRGCLGRPWL FRDLADAFAGRDTTTLPTLGEVCAMIRRHAELLVKYQGMHGLVDMRKHMAWYLKGFPVGG ETRHVLGQISSFDELDSLLATLDHDAPFPIKELGKARGRQGAPRRKVVMPHGWLDTHTLD DDDLSAAEIDASGG >gi|302034487|gb|GL383264.1| GENE 135 124967 - 126085 696 372 aa, chain + ## HITS:1 COG:CC2008 KEGG:ns NR:ns ## COG: CC2008 COG0232 # Protein_GI_number: 16126251 # Func_class: F Nucleotide transport and metabolism # Function: dGTP triphosphohydrolase # Organism: Caulobacter vibrioides # 56 360 12 391 394 145 32.0 1e-34 MSEVGERARAWALTMAGHRGFDDIVHAHPSSTARIDIGEVVGREAREERENLLLRPGATR ARGAGNRAVAEDPDPERTCFERDRDRIVHSTSFRRLAGKTQVVVHPTDHQRTRLTHALEV AQVARSIAAGIGANITLADAMALGHDCGHGPGGHASEQAFDAFIPEGFDHGPWGADVSLA SLNLCAETLDGIRNHSWSHPAPGTVEGEVVSFADRIAYCAHDLEDAIKAGIVTVKELPQV VTEVAGTDRRTQLSVFIRCVIDTTCATGRVGMSADVAEALAALRAFNYERIYTRPESLGQ AEAVVEVLHGLVAYYQGHIDQVPTEFLETDADRIHQVVAYVGGMTDQFAFSHAAELLGWD RRRLPRGMGRGF >gi|302034487|gb|GL383264.1| GENE 136 126105 - 127013 642 302 aa, chain - ## HITS:1 COG:STM0503 KEGG:ns NR:ns ## COG: STM0503 COG0390 # Protein_GI_number: 16763883 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Salmonella typhimurium LT2 # 59 282 11 236 259 80 29.0 3e-15 MAQGDVLTNDFVDPGPFPNQGDVLLVDPASHTYDPTHVWPEHPNGAKLSAVTVNPTWQLG LAMVLLVALAVIASLLGRLGVAKASVIASVRAVVQLGIVSVILAYALAHMWAACLFTVLM FAIAVHTTANRSGVSAAWMWAAIAMIAGVLPVLLIIFATGCAPLSPASLIPVAGIIIGNI MSGHTLACRRFFADLREGIGIFEAGLAVGFPRRDAIALVTEPSVTESVLPTVDRTATVGL VTLPGAFVGVLLGGGSALQAGAAQALVLIGILAGQAVTVIVAHELVKGAKLLPEDLTGKL HP >gi|302034487|gb|GL383264.1| GENE 137 126921 - 128774 1315 617 aa, chain + ## HITS:1 COG:Cgl2216 KEGG:ns NR:ns ## COG: Cgl2216 COG0358 # Protein_GI_number: 19553466 # Func_class: L Replication, recombination and repair # Function: DNA primase (bacterial type) # Organism: Corynebacterium glutamicum # 3 609 6 627 633 499 44.0 1e-141 MAGRINEEDIALVRERARIDEVVGEYVTLRHAGGDSLKGLCPFHDEKTPSFQVTPSRGLF YCFGCGEGGDTISFVQKIDNLTFVEAVQRLADKVGVQLRIIDDGRPGLEPGLRMQILAAN EAAAEFFQSQMSTDEGRIAREFVAGRGFSPDAAVQFGMGYAPRDGHVLRDHLMAKGFAPK VLIESGLVRSQGWDFFQGRVLWPIKDSGKSVLGFGARRVYDDDRLPAKYVNTPETPVYKK SHVLYGLDLARANIGKKSQAVIVEGYTDVMAAHLSGIDTAVAACGTAFGDDHARLIQRLM GNSGSLNGEVIFTFDGDAAGQKAALKVFRGDNQFSSQTYVAVEPTGLDPCDLLMQRGPEA VRELVARRIPLYRYVMENTVSQFDLDRADGRVAAIRAAAPLVTSIRDQSLVDGYLRELSQ VVGTDVDLVRREVSHTRRQHRSEPQLTIVPPPEPQQGSGIPWPDPADVSLSAERGFLKLA LQHPDLFNEEWDQVEVEDLRHPAYQAVFEAVLAVPRGQDRWTEKVSEATPDPQVKQLEVA LLVESVLREEPDRDYAEAYAARVRLLSITDDIANLKSRLQRTNPNQDRKLYNAMFSDLVT LEALRKSLIVAGGAASA >gi|302034487|gb|GL383264.1| GENE 138 128861 - 129673 443 270 aa, chain + ## HITS:1 COG:PA3622 KEGG:ns NR:ns ## COG: PA3622 COG0568 # Protein_GI_number: 15598818 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Pseudomonas aeruginosa # 44 266 78 324 334 70 29.0 3e-12 MRYTDFIDGVGILDPAEEHDLFRRLDAGAIADAILAGHFLAAVPVSEAELRRISDDGVGA RQTLWRQMLAIVLTQARQAAVSYRCSVEDLIQAGCIGLGEAIERYDVRRGARFSTVAWTW IRRRIGEEVVRLSGARSRSVMREAAEVARIEEELTARWQSVPSSDAIAARMGKDVMWVEK RRVECWEVETSFFEQVAVVQKSCDDPESGLIGLLTGQERRIVELRHGFEGEPMTITAVAH ELGLSASNVRRIEQRALGRLRRHLQQVVAA >gi|302034487|gb|GL383264.1| GENE 139 129687 - 130193 383 168 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4016 NR:ns ## KEGG: HMPREF0675_4016 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 168 1 168 168 296 100.0 2e-79 MWWTKGPSADEMARLRAVLGFNDVKVLAHGRGDGAIVIAVTEGLVVLTDEVDSAVAWHEI VRGRWNGEASTLSWEFLDGSSASVVLSKPGKIPEVFRAKITESIAATRTVPVHGGNVLIA GRIPAGRLADADGAIAWTAVARDSADLNDPETRQAVMEATDSLKNEWG >gi|302034487|gb|GL383264.1| GENE 140 130507 - 131487 675 326 aa, chain - ## HITS:1 COG:BS_ytmO KEGG:ns NR:ns ## COG: BS_ytmO COG2141 # Protein_GI_number: 16079985 # Func_class: C Energy production and conversion # Function: Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases # Organism: Bacillus subtilis # 1 326 2 330 334 183 34.0 5e-46 MKLSALEQIPLFVGHDVTQTLDETVTLAQKLEEIGFHRFWLAEHHNTDHFLSSAPDLLMA RIATATQSIRLGSGGVMAMHYGSLQMAERFSTLTAFFGDRIDMGLGRAPGGDMLSAHALN QGQVIRPEAINSLIAETVGFVRETLPPKHPYAKVVVPPAGQIQPQTWLLGSSGQSAAWAG EQGMDYAYAQFFTGRQDTGIMDHYRAHLSDGFPGRTLSAVCVSAAPTRQEALEQSLMAAN FRVSLGTGRPVTFVTASQMDAETRSLLTSYVLSNEDTIFVGDYDEVADKLTAFQDAHHVD ELMLISYIDNVQTKVERYRQLAKRLI >gi|302034487|gb|GL383264.1| GENE 141 131529 - 132932 1321 467 aa, chain - ## HITS:1 COG:ML2254 KEGG:ns NR:ns ## COG: ML2254 COG0380 # Protein_GI_number: 15828204 # Func_class: G Carbohydrate transport and metabolism # Function: Trehalose-6-phosphate synthase # Organism: Mycobacterium leprae # 2 464 9 489 498 480 52.0 1e-135 MSETVQDKVDFLVIANRLPVDRKVDDDGSVSWKSSPGGLVTALEPVMQRKGGAWIGWHGA PDEVVKPFHHDGYDIHPVPLSAQEVEEYYEGFSNATLWPLYHDCIVEPVFHREWWDAFQK VNKRFAEQAAEQAAEGATVWVQDYQLNLVPKYLREMRPDLRIGFFLHIPFPPIELYSRLP WREELVEGLLGADLIGFQTPGAAANFQRLARHRPGVTAARGRAHTPDGRTVVIRDFPISI DSRGFHELATSEKVKAEAAKLREDLGHPGTIIFGVDRLDYTKGLRQRIRAVGELFKEGKL DPHEVVFLQLATPSRERVEEYKILRDDINLLVGQINSKVGSIANRALVYRNESVPREVLA AMYQMADLMLVTPVRDGMNLVAKEYIACRSNDDSALVLSEFAGAARELKQAYMVNPYDID GMKATIMKALTDSPKIKARKMRSMRRQVFDKTIDVWADNFLTELEGQ >gi|302034487|gb|GL383264.1| GENE 142 132910 - 133950 611 346 aa, chain + ## HITS:1 COG:MTH1760 KEGG:ns NR:ns ## COG: MTH1760 COG1877 # Protein_GI_number: 15679748 # Func_class: G Carbohydrate transport and metabolism # Function: Trehalose-6-phosphatase # Organism: Methanothermobacter thermautotrophicus # 93 291 26 213 264 70 26.0 6e-12 MSWTVSDIFDHTSHGGHAVQQGHFHATNRWFPFEVILCYLAARTHHESGMCDDCLMTDRP VPADKSWTALTDAGRGILDAVATAPATVVLALDFDGTLAPIVDDPAASTMAQESREAMSR MDGKLAAMAIVTGREVAAVRRMTAVDQQPGLEHLVVLGQYGVERYDAASGVLRDPEVPEA VRLAKGRLEELAEELGREDPRDKGCWTEDKGRAVALHTRRASDPTHALATAVPRVREIAT DLDLHCEDGRNIIEVKSAVTTKAQALRELIDEVEPQILIMCGDDLGDVPALEVVAEWINA GHPGARVVSFSGEQPLMADYADVICDQTEGISAFLRDLADRVCVEM >gi|302034487|gb|GL383264.1| GENE 143 133997 - 134233 137 78 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313792218|gb|EFS40319.1| ## NR: gi|313792218|gb|EFS40319.1| hypothetical protein HMPREF9575_02208 [Propionibacterium acnes HL110PA1] hypothetical protein HMPREF9576_01623 [Propionibacterium acnes HL110PA2] hypothetical protein HMPREF9589_01225 [Propionibacterium acnes HL059PA1] hypothetical protein HMPREF9593_01166 [Propionibacterium acnes HL046PA2] hypothetical protein HMPREF9604_01871 [Propionibacterium acnes HL036PA1] hypothetical protein HMPREF9605_02048 [Propionibacterium acnes HL036PA2] hypothetical protein HMPREF9612_02139 [Propionibacterium acnes HL063PA2] hypothetical protein HMPREF9598_01163 [Propionibacterium acnes HL050PA1] hypothetical protein HMPREF9606_01845 [Propionibacterium acnes HL036PA3] hypothetical protein HMPREF9614_02158 [Propionibacterium acnes HL002PA2] hypothetical protein HMPREF9618_02206 [Propionibacterium acnes HL082PA1] hypothetical protein HMPREF9620_02088 [Propionibacterium acnes HL037PA1] hypothetical protein HMPREF9595_00672 [Propionibacterium acnes HL005PA2] hypothetical protein HMPREF9596_01275 [Propionibacterium acnes HL005PA3] hypothetical protein HMPREF9565_01988 [Propionibacterium acnes HL053PA2] hypothetical protein HMPREF9610_00672 [Propionibacterium acnes HL027PA2] hypothetical protein HMPREF9615_02025 [Propionibacterium acnes HL002PA3] hypothetical protein HMPREF9584_01490 [Propionibacterium acnes HL092PA1] hypothetical protein HMPREF9586_01754 [Propionibacterium acnes HL083PA2] hypothetical protein HMPREF9563_01884 [Propionibacterium acnes HL020PA1] hypothetical protein HMPREF9579_01943 [Propionibacterium acnes HL087PA1] hypothetical protein HMPREF9588_01953 [Propionibacterium acnes HL025PA2] # 1 78 1 78 78 122 100.0 8e-27 MLGVLAKSATTPTYTHHHGGGHNRLTGTITPDTVCAHHSTFPPISHDHRPNRNIYRFSSY SVRRQSSMASESMQAQLP >gi|302034487|gb|GL383264.1| GENE 144 134496 - 135431 768 311 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 [Streptococcus pneumoniae SP6-BS73] # 4 307 3 305 308 300 52 7e-80 MAKIANDVTELIGNTPLVKINKLFPDSQATVLAKLEFYNPASSVKDRIATSIVDAAEASG QLNPGGTIVEATSGNTGVGLALVGAARGYKVIITMPETMSKERRAIIRLLGAELVLTPGA DGVPGANSKAAEIVENTPGAILASQFDNPANPAIHHDCTGEEIWNDTEGEVDAIVAGIGT GGTISGAGKYLKEKDPEIKIFGAEPAESPVITKGDKAPHKIQGWGPGFVPDNLDKSVVDG ILLVPGDEAIAFARRAAAEEGIITGISGGGALQAAGQVVARPEFAGKTIVVVIADTGERY LSTALFEGLLD >gi|302034487|gb|GL383264.1| GENE 145 135493 - 136809 537 438 aa, chain - ## HITS:1 COG:Cgl0763 KEGG:ns NR:ns ## COG: Cgl0763 COG1167 # Protein_GI_number: 19552013 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Corynebacterium glutamicum # 3 431 32 451 453 379 54.0 1e-105 MDGVLAPGDHLPSTRVLSAQLRVSRGTVVASYEQLEAEGYLVAAAGSGTQINPDLRGLHR RSATTASVPRPQRHRGIDLTPGVPDTAGLANSAWRSAWHRSCVNPSRITDPLGSPHLRHE IAEHLRQMRSLLADPRQVVVTGGARAGLAELIQVLCDGSRRLTIGVESPGYPSLRRVPTA LGHRIVGLPTDDQGLDPASLPTGRDRKRLDAVLITPSHQYPWGGSLSASRRAAVIEWAEM ASCWIVEDDFDSELRHVGAPLPALASLDEEHTILLGTFSSVLTPALGCGYLVVPPDLVHS FARQRRATGQPVPAIVQEAVADYLSTGALRRRTQRMRQVYRRRRRTVIDTLGSLPGTTLQ PIDGGLHAVLVFDGSEDDVVQRCRQEGVGVTPLSAYWGSSDAGVAGIVLGFGSHDDATLA SALKIIAGVVTTHGRLSS >gi|302034487|gb|GL383264.1| GENE 146 136980 - 137894 903 304 aa, chain + ## HITS:1 COG:Cgl0764 KEGG:ns NR:ns ## COG: Cgl0764 COG0214 # Protein_GI_number: 19552014 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxine biosynthesis enzyme # Organism: Corynebacterium glutamicum # 15 304 30 319 319 446 87.0 1e-125 MGSMSEHIPATNSTGTTRVKRGLADMLKGGVIMDVVTPEQAKIAEDAGACAVMALERVPA DIRAQGGVARMSDPDLIEGIIEAVSIPVMAKARIGHFVEAQVLESLRVDFIDESEVLSPA DYANHIDKWAFGVPFVCGATNLGEALRRITEGAAMIRSKGEAGTGDVSEAVRHLRTIRAE MARLSSMSPDELYVAAKELQAPYDLVAEVARTGELPVVLFVAGGVATPADAALVMQMGAQ GVFVGSGIFKSGNPAARAAAIVKATTAYDDPDTIAEVSRGLGEAMVGINVADVPAPHRLA ERGW >gi|302034487|gb|GL383264.1| GENE 147 137896 - 138501 410 201 aa, chain + ## HITS:1 COG:Cgl0765 KEGG:ns NR:ns ## COG: Cgl0765 COG0311 # Protein_GI_number: 19552015 # Func_class: H Coenzyme transport and metabolism # Function: Predicted glutamine amidotransferase involved in pyridoxine biosynthesis # Organism: Corynebacterium glutamicum # 4 199 2 194 200 210 56.0 1e-54 MAPLVGVVALQGGFAEHIEVLESLGANTRRVRRSADLQGLDGIVLPGGESTVIDKLMRSF SLAEPLKDAVRRGLPVLATCAGLVVLATDLEDAAKGQHTLSLLDVTVRRNAFGSQLDSFE GTLDIDGVGDGVSATFIRAPVITRVGPGVEVIAQLPDEAGNVSGAIVGVRQRNVLALSFH PEETDDDRVHRTWLRQVSEEV >gi|302034487|gb|GL383264.1| GENE 148 138653 - 139924 836 423 aa, chain + ## HITS:1 COG:PM1900 KEGG:ns NR:ns ## COG: PM1900 COG0161 # Protein_GI_number: 15603765 # Func_class: H Coenzyme transport and metabolism # Function: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase # Organism: Pasteurella multocida # 1 401 62 453 468 372 46.0 1e-103 MLAVTAANGVRLQLHDGEHHHEVIDAMASWWCQIHGYRNPVLDEALNRQSSQFSHVMFGG LTHKAAVDAVMSLVRLAPGPLDRIFLADSGSVGVEVSLKLARQVQIARTAARGGTLTRTR VAALRGAYHGDTLGAMSVCDPIGGMHAMFSDSIPQQIFLPRPPSFAADEADVETWCSEAD EILDTHRDDLAGIIVEPILQGAGGMWPWSPSCLKHLRRRADELDLVLIADEVATGFGRTG KLFACEWADIVPDIMVVGKSMTGGYLTQSAVLCSDELASEVSRGPGGSLMHGPTFMGNPL ASAVAAASLAIISQGQWNDDVTRIADVMSRELASLRNVPGVIDVRVFGAIAAVQVDTPIV MRRATRTTVENGVWLRPFRDLVYAMPPYICTNDDLEAMAAGMRAVVIDQLDAAQDSTDYR KES >gi|302034487|gb|GL383264.1| GENE 149 139921 - 140625 515 234 aa, chain + ## HITS:1 COG:Cgl2554 KEGG:ns NR:ns ## COG: Cgl2554 COG0132 # Protein_GI_number: 19553804 # Func_class: H Coenzyme transport and metabolism # Function: Dethiobiotin synthetase # Organism: Corynebacterium glutamicum # 10 218 4 202 224 105 36.0 5e-23 MNITDLNGIVIVTGTDTDVGKTVTTAVIASALKQSGKDVTIIKPYQTGLDHDEPGDVHDA GRLASIDADNVLEYVRCPEPLAPTTSAARAGMTIPSIEEVATRILVDSDGHDATLVEGAG GILVGLDNDGSGVLDLMDALTRRGHEPHVIVVTRSVLGTLNHTGLTCNAIRDRGHQVDAI VIGSWPDRPDLAERCNLEEIEDAAGAPLVGVIPAGIGKDPEAVQQTARNLGETQ >gi|302034487|gb|GL383264.1| GENE 150 140622 - 141983 1197 453 aa, chain + ## HITS:1 COG:PA5510 KEGG:ns NR:ns ## COG: PA5510 COG0531 # Protein_GI_number: 15600703 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Pseudomonas aeruginosa # 11 435 3 429 449 219 33.0 7e-57 MSTTLAPDSQLKDLGYQPSLNRQLPFGSLLVYGLLFFVPMAPVAVFGLVVNRSGGVPVLV YLVAAAVMGLSAISYREMALRFPVAGSVYGYTRFSLGRTPGFIAGWLILLDYILMPALLT VLSAVALSHIWPSVPMGIFSLVFVFASMALNLQGMTVTTRVGIVLLTIQLATIAFFLVCV GLGLAGGGVVWSWHALWRSGTSWTSVASAVSIAALSYLGFDAVATLNEEARGGGRAVGIA TLSLVGLLAVLFGIQVMAAGLVSDATHFAPGGATDRAFYHAVDTVCPAWFIPVFTVVNAF VAIFACLVVAHSSTARLIFAMARDKVMPPALSRTNSKGVPWVAIIVVATVTAILAITFDS HVETMTTLVTFGALSSYVLLHADVIVQCIVKERSHNWVRHLIVPILGALTLLVALAKTEE MTRIVGLGWLAAGIIGAVIARVRHSHHVGTGAS >gi|302034487|gb|GL383264.1| GENE 151 142008 - 142199 70 63 aa, chain - ## HITS:1 COG:no KEGG:PPA0970 NR:ns ## KEGG: PPA0970 # Name: not_defined # Def: putative membrane efflux protein # Organism: P.acnes # Pathway: not_defined # 1 63 3 65 65 115 100.0 4e-25 MLIGVNIGPNLSCAGLLATLLWRRIIEAHHRPARQVYSPRRTHGPRKHPHLGMHDMSNER VSD >gi|302034487|gb|GL383264.1| GENE 152 142526 - 142801 167 91 aa, chain + ## HITS:1 COG:no KEGG:PPA0971 NR:ns ## KEGG: PPA0971 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 41 91 1 51 61 93 96.0 2e-18 MANFRPADSSDQAYRSLQWWLLAGHVGRTKANIITITRMAMLEASSHHDVTQKCYREAVN HRGRSVVRRQGQQRKVLADVLPGKVATCLAS >gi|302034487|gb|GL383264.1| GENE 153 143158 - 143403 111 81 aa, chain - ## HITS:1 COG:no KEGG:PPA0972 NR:ns ## KEGG: PPA0972 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 81 1 81 81 125 100.0 5e-28 MRMRVLRGHEPGVELWSCAIKWHAIGTMRSGYVAGVIGSDSRVAREVLAIMVIGSAVAAA ATTARTDLRSLVDLRNATPYR >gi|302034487|gb|GL383264.1| GENE 154 143456 - 143776 120 106 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|314984008|gb|EFT28100.1| ## NR: gi|314984008|gb|EFT28100.1| hypothetical protein HMPREF9594_02233 [Propionibacterium acnes HL005PA1] # 17 106 1 90 90 174 98.0 2e-42 MLALLLSSAPYAPQLKLAGLFLFTLNYNILDLPREWVDIAGDIRSSAAFLACYVNKYWPR PVEHTRVSYGLATLAGLDRPGRRSSLCRQAQRRVVATAACRIYLPR >gi|302034487|gb|GL383264.1| GENE 155 143949 - 144746 660 265 aa, chain - ## HITS:1 COG:ML0089 KEGG:ns NR:ns ## COG: ML0089 COG0561 # Protein_GI_number: 15826925 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Mycobacterium leprae # 4 258 16 274 281 100 31.0 2e-21 MIALIATDLDGTFLGADKLPSAENTEAMFAAADAGVHVVFATGRPYRWLTVLDPFRPIHP TLLASNGAVSVNAATGKVLHDLYMTPQTVAGIVCDVRQALPHALFCTEEATQWFSEEGFD RWQISGPPDGEGQIESFLGDDHRIVKLLVRTFGFPSDELFQIVKPIVGDRGTVSLSATMT DGLVEIAGRGVSKGSALKQVCDDLGIDPADAAAFGDMPNDLTMLETVGHPYIVSGAHPVL RDRGFAIIGNHDESAVGRKVRALLD >gi|302034487|gb|GL383264.1| GENE 156 144746 - 145678 220 310 aa, chain - ## HITS:1 COG:no KEGG:PPA2378 NR:ns ## KEGG: PPA2378 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 310 1 310 310 400 100.0 1e-110 MSSNPWPPEALPLQPSDPPRVDEFWLDARLLTMPSGTVFSAHDDDGQGVLVIVLSHGAAS DPASWDRLAGEVNHLHSDTVIARGGAGQSTGRLSGLYRPGTGPENGGPSLAPWVALVNDG SRAAVAEARRILDAVDMSALSGTPVAGPSFRLHWIDDTAAGRVHTWPLPWPGRRDKAGWS TTVIAWLLTLFIALTGLLIAVLLFQNVPPSPPPPPVPTSASSNRSAHSSSSPTPSRSSGQ SASPSHSSKSPSPSKGQTPSPTSTSPSTGRSGSPTPSNNPSTSPSRTPSMQSPGAGTGTS SGTPTGRGRL >gi|302034487|gb|GL383264.1| GENE 157 145576 - 145833 153 85 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4034 NR:ns ## KEGG: HMPREF0675_4034 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 25 85 1 61 61 119 98.0 3e-26 MASLGDGRRAKTRRPAAGQTVAGVVPQEAMDYSTSSIISPHLGHDPRTTGAYWHWFFVVL GLWHCHGIVSAGPSRVLRKPGRRRQ >gi|302034487|gb|GL383264.1| GENE 158 145890 - 146948 992 352 aa, chain + ## HITS:1 COG:ML1810 KEGG:ns NR:ns ## COG: ML1810 COG0714 # Protein_GI_number: 15827968 # Func_class: R General function prediction only # Function: MoxR-like ATPases # Organism: Mycobacterium leprae # 12 319 45 352 377 366 61.0 1e-101 MSNDEAARLIGQAIGQVQRVIVGQERMVEQLMVGVLAKGHILLEGVPGVAKTLAVRSFAT VLGGSFARVQFTPDLVPSDIVGTRIYSASKETFDIELGPVFVNFVLADEINRAPAKVQSA MLELMAERQVSIAGQTFPAPHPFSVIATQNPVESEGVYPLPEAQRDRFLLKIDVPYPRGN EEFEILRRMSVKAPQPQQVLTPEAVVALQDMASDVFVHNLVAEYVVRLVLATRNPGDFGM SDLANVIQIGCSPRATLGLVAAARALALVHGRDYVLPTDVQAVAVDVMAHRLVLSFDAIA DNVSASDVIERVVAMVPPPTPVWNEEQRQTAQHNYPNDLGQYPAPTTPPAQL >gi|302034487|gb|GL383264.1| GENE 159 146959 - 148002 827 347 aa, chain + ## HITS:1 COG:ML1809 KEGG:ns NR:ns ## COG: ML1809 COG1721 # Protein_GI_number: 15827967 # Func_class: R General function prediction only # Function: Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) # Organism: Mycobacterium leprae # 8 335 3 315 320 222 43.0 7e-58 MARPTFRDPQAPSVAQTLVSPPTGATLPLNQLAPEAALRRLELTIVRRLEGFLHGDHLGL LPGTGADVNDARPYEPGQDDVRMMDWAVTARTTVPHVRETIVDRELEVWALLDVTGSMNW GTVSMTKRDLGIAAIATIGFLSQRMGDRFGGVIMRPDSVRRLPARSGRTALYGLLRSMLT EPIVADNAPGQVTLAKGIENLAASGRRRGMKVVVSDFLSPGDDVLNPNDRPEWERSLRRL SVRNQVLCIEVVDAAELDFPDVGDVMVRDPETSFAHYVNTADKATRERMNAASRAQRERI SAAIRRAGAGHLQLRTDSDWVTDIARFVLGYRRTAAILHQPPQGVTK >gi|302034487|gb|GL383264.1| GENE 160 147999 - 148967 594 322 aa, chain + ## HITS:1 COG:ML1808 KEGG:ns NR:ns ## COG: ML1808 COG2304 # Protein_GI_number: 15827966 # Func_class: R General function prediction only # Function: Uncharacterized protein containing a von Willebrand factor type A (vWA) domain # Organism: Mycobacterium leprae # 6 299 9 311 335 158 32.0 1e-38 MTPLFLGLPEVKSPWVPWLLLLVPVLLVFYIWASHRSRSTAMRFTNTAILGAVMSKQPQW KRHIAVAAALLCVATTTVAWARPMGIEQVPRNRATIVVAIDSSLSMKADDVSPTRLAAAK AKAKDFINSLPTGFNVAVVSISEHPEIRMPPSTDRPTVLRAVDGIELQDGTALGGAIDKS LEAVKMAPGGSKNPAPAAIVMLSDGDNTQGGSPLVAANRAAAAKVPVYTIAFGTETGYVD LNGQRERVAPDTKLLSTVADRTHAKSWTADSADKLQEVYQQVHSSVGYEPVRKEVTATWA FYAFCFAVVSGLATLSVAVRWP >gi|302034487|gb|GL383264.1| GENE 161 148967 - 149920 518 317 aa, chain + ## HITS:1 COG:ML1808 KEGG:ns NR:ns ## COG: ML1808 COG2304 # Protein_GI_number: 15827966 # Func_class: R General function prediction only # Function: Uncharacterized protein containing a von Willebrand factor type A (vWA) domain # Organism: Mycobacterium leprae # 13 291 19 308 335 174 39.0 2e-43 MTLIAFGRPGRLWWLVVPVVFLAVYLVVVMWRRQPHQGRNELKRLLPSSRPWKQHLAMGL SVLSMAIIVLAFAQPKAYHEVPRDRATVVVAIDVSRSMVATDVEPSRLSAAKTAAKDFLG DLPPRFNVSLVKFAASAQVVVPPTTDRAAVSTAITNLQVLPSTAIGEGIYSSLNALKLVP DDPKHPGQKPPAAIVLLSDGATNVGRPSLEAAKEAGRQHVPVYTIAYGTAGGYVVEGGQR QPVPVNHYELAAIAKASGGEKFSAESLGQLSDVYKSIAQSVGYEKVFGEVTDKYVGVALA LVVLTAASVISLCARWP >gi|302034487|gb|GL383264.1| GENE 162 149969 - 150685 482 238 aa, chain + ## HITS:1 COG:XF1717 KEGG:ns NR:ns ## COG: XF1717 COG0325 # Protein_GI_number: 15838318 # Func_class: R General function prediction only # Function: Predicted enzyme with a TIM-barrel fold # Organism: Xylella fastidiosa 9a5c # 6 230 32 255 266 218 53.0 7e-57 MSMADNLAAVRTRIDDACRACDRNPGEVSLLPVSKTKPPSMVDEAYRAGYRLFGENKVQD ALAKSELMDANHPGLEWSIIGGLQTNKAKYVARFATEFQALDSLKIAHELDKRLQKEGRQ LRVLVQVNSSAEPQKSGIAPEEAVDFARELAAFDSLDVRGLMTVALNSSDQRAVADCFDL VVATQEKLRQEAGDTSDWSELSMGMSGDLEIAIAHGSTQVRIGTDIFGARDPARTWRP >gi|302034487|gb|GL383264.1| GENE 163 150763 - 151260 190 165 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4040 NR:ns ## KEGG: HMPREF0675_4040 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 165 1 165 165 297 100.0 1e-79 METTQLASGTLFIHSASTALRSHIEWAADAAFVMPAPLRWTSQPVEPGTWRAESAWCGDV VDARTFISTLAAWQRVRVELTVETGAAPHRWSVTPDLGIFSAPIDEAGSVLVDEMRLRSA ITAARRTGLRLDDEICDLLGEPWDVELEPYRACDPSLQVPWLSAG >gi|302034487|gb|GL383264.1| GENE 164 151346 - 152617 1059 423 aa, chain - ## HITS:1 COG:sll1069 KEGG:ns NR:ns ## COG: sll1069 COG0304 # Protein_GI_number: 16329903 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: 3-oxoacyl-(acyl-carrier-protein) synthase # Organism: Synechocystis # 4 416 9 412 416 304 43.0 2e-82 MSDVVITGFGTTTPLGPDAPSTWQGLLEGRNGVHTLDFDWIDDVPVKFAAPAVDDPANHL PRPQARRLDRSSQLALVAAKEAWADAGLELPEADDNSGSNGIDPERLVVCCATGIGGLHS LLGQWDIQKDKGFKRVSPFTVPMLMANAPAANIGLMVHAKAGVHTPVSACASSSEAISLG LDQLHLGRADIAVVGGAEAIIHPLPVAAFAQMKALSTRNDDPEHASRPWDVDRDGFVIGE GAAIMVIETLEHAQARGAKIYGTLAGSGISADSHDIVQPDPTGSGQASAMHKALASAGLS PSDVNHVNAHATSTPLGDTAEAHSIAAVLEKATDQVLVNGTKSMTGHLLGGAGALESFAA VMALLKRQVPGTINVEHLEEGLEINVVTETTDLPDGDLAALNNSFGFGGHNVTLAFTNTN ATR >gi|302034487|gb|GL383264.1| GENE 165 152691 - 152936 417 81 aa, chain - ## HITS:1 COG:ML1654 KEGG:ns NR:ns ## COG: ML1654 COG0236 # Protein_GI_number: 15827872 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl carrier protein # Organism: Mycobacterium leprae # 18 76 19 77 115 65 59.0 2e-11 MADKDQILADMADIVNDITGVDQSEVTLEKFFVDDLDVDSLSMVEIIYACDEKFGVEIPD EESKNIKTVGDAVNYIIEHQG >gi|302034487|gb|GL383264.1| GENE 166 153019 - 154017 1002 332 aa, chain - ## HITS:1 COG:MT0557 KEGG:ns NR:ns ## COG: MT0557 COG0332 # Protein_GI_number: 15839929 # Func_class: I Lipid transport and metabolism # Function: 3-oxoacyl-[acyl-carrier-protein] synthase III # Organism: Mycobacterium tuberculosis CDC1551 # 1 332 1 333 335 273 46.0 2e-73 MTAIKTRPVHGYSKFLSTGSARGSRVVTNKEMCTLIDSTPEWIEQRTGITERRWATNSET VASMGTTAARTALERSGLEASQIDAIIVATVSHHRPSPSLAAYIARELGLGDAAAFDLNG ACAGFCYSTALADSMIRTGSANYVLVIGVEKLSEMTNLDDRSTAFLFSDGAGAAIIGASD EPGIGPVVWGSRSDQLKTIELEDWPTASADPNKIHPLIRMEGRAVFKWAMTDVAKRAAEA IAEAGITPADLDVFIPHQANDRITDVVSRHLKLPESVTVCHDIADMGNTSAASVPIAIDR MLQRGQAHSGDLALIIGFGAGLVYAGQVIRLP >gi|302034487|gb|GL383264.1| GENE 167 154014 - 155015 831 333 aa, chain - ## HITS:1 COG:MT2303 KEGG:ns NR:ns ## COG: MT2303 COG0331 # Protein_GI_number: 15841736 # Func_class: I Lipid transport and metabolism # Function: (acyl-carrier-protein) S-malonyltransferase # Organism: Mycobacterium tuberculosis CDC1551 # 24 314 1 293 302 200 46.0 3e-51 MTTVGTSSVPCLASDPSRGHSGDVLAIVAPGQGAQKPGFLSDWMSDATFSDHLAWLSAVA DIDLVTHGTTSDEATIKDTAVAQPLLVAAALATAWSVDPKIFSQADLLAGHSVGEIAAGA AAGAFSAEAAMVLVRERGRAMAEAASRTATSMTAVIGGDADEVLTAIKAAGLTPANHNGK GQIVAAGTVEQLEAFAAEPPSRTRLFPLSVAGAFHTAHMEPAVDHLREVAAAMPTTIPTV ALLSNLDGAVVADGREFADRLVQQVAHPVRWDLCMDTMAQRNITGLLELTPAGTLTGIAK RNLKGVELFNLNTPDQIPAAREFITTHSSKENA >gi|302034487|gb|GL383264.1| GENE 168 155075 - 155320 150 81 aa, chain - ## HITS:1 COG:no KEGG:PPA0985 NR:ns ## KEGG: PPA0985 # Name: not_defined # Def: 2-dehydropantoate 2-reductase (EC:1.1.1.169) # Organism: P.acnes # Pathway: Pantothenate and CoA biosynthesis [PATH:pac00770]; Metabolic pathways [PATH:pac01100]; Biosynthesis of secondary metabolites [PATH:pac01110] # 1 81 224 304 304 155 98.0 7e-37 MARAHSARIADDFIEKNLTFLAGQDPASTTSFQRDILAGRPSEYAAQVGAVPRLGDEVGV DTPINDVIAAVLGRREAQNRA >gi|302034487|gb|GL383264.1| GENE 169 155154 - 155990 64 278 aa, chain - ## HITS:1 COG:mll6982 KEGG:ns NR:ns ## COG: mll6982 COG1893 # Protein_GI_number: 13475812 # Func_class: H Coenzyme transport and metabolism # Function: Ketopantoate reductase # Organism: Mesorhizobium loti # 1 186 1 206 326 89 36.0 5e-18 MKAAIIGAGAIGGFYGAALADAGMDVSFIARGKTLIAIREHGLRLVGNTELTLDVPVTDD AAEIGQVDVVLLCTKTFQVAEAARTYLPALMGPHTLVVTTQNGVIAPHELSAIIGPEHVA PGVCRQWVKIVEPGLIMDLGGPRMFEVSTIDDSPNTLVNELREACRKGGLTSPDVENITT TLWVKMCSVVPPRSLWCSTRRLLGRPPWSLPRCLRSVYRRNCSGGSRSQRQDRRRLHREE PHIPCWAGSRVNNLLPARHPCWTPQRIRCSGRSCPPIG >gi|302034487|gb|GL383264.1| GENE 170 155987 - 156352 261 121 aa, chain - ## HITS:1 COG:no KEGG:PPA0986 NR:ns ## KEGG: PPA0986 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 121 1 121 121 231 100.0 6e-60 MNVMIPVRPDGSVEPRFGKAPMVAVAQVDNDGHVTDWHTFKVEWDRLHNEGTEGRHHARI VRFLREHDVVACVATHAGMGMQRTLAAMKVPLLPATLPRARESVEHAMISAYADTKGTEE S >gi|302034487|gb|GL383264.1| GENE 171 156515 - 157960 1016 481 aa, chain + ## HITS:1 COG:Rv3331 KEGG:ns NR:ns ## COG: Rv3331 COG0477 # Protein_GI_number: 15610467 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Mycobacterium tuberculosis H37Rv # 17 479 40 498 502 333 46.0 6e-91 MASNGHARVEMKPGDSGSAGATRNSQTSRAVFIAVTAAALGITYGYDISNTAAALQFVQR DFGIYSAINTASVVGQIAGAILGGPMANAIGRKKSMLVIAAGYTIFAILTAISPSAGLFL AMRVLLGITIGLSITVVPVFIAESAPASRRGGLATAYQVTCVVGIILGYLVGYSLLPTDT WRWILGVAAVPAFIVLLMLVRTQETPSWYMLKGREDEARRAMERIEVAELVEPSLDEIRN SLSSRPSGSVWGRLREMFHGGMARATIFAIVLGFSIQITGINATIYYAPGIYSRMGFTDT ATTYLVPSLVQFLSLISVVISMLVIDKVGRRFVLITGISTMIVATIVLIVTYLASGFEGA VAGIIGLVEMSLFTMGFTFGFGSIVWVYAGEIFPARYRSLGASLVLTADLIANAITAQLG AAMLDGIGLAGTFGVYGGLLVVALLFLLRYAPETSGRSLEEIQDYWNNGARWPKADSPSM G >gi|302034487|gb|GL383264.1| GENE 172 157989 - 159110 668 373 aa, chain - ## HITS:1 COG:ML1652 KEGG:ns NR:ns ## COG: ML1652 COG2508 # Protein_GI_number: 15827870 # Func_class: T Signal transduction mechanisms; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Regulator of polyketide synthase expression # Organism: Mycobacterium leprae # 7 371 37 408 414 216 38.0 5e-56 MARTSAMTTATLEEMGRRHSWFRDLSAEERSWISIVARSGIDGFVQWFADDDAEPYSPTD VFDVAPRSMTRKISLHQTVELVRTTIDVVEAQIETEMPRGDRQVLRTAIVHYSREVAFAA AEVYARAAERRGTWDERLESLVVDAVVRADADEQLISRASTLGWRPGINLCVVVGRAPTT EHELHVLRRDGERMQMTVLAAVQSDRLVVILAGEKLVDDPAAVAASEALANHFAPGPIVV GPVVADLTLAPASARAALSGIRAARAWPEGPQVMAAVDLLPEQVLSGDTDAIAWLVNEVY SPLATASGDLMDTTVSFLDHGCSVEGTGRAMFIHPNTVRYRLKRIQDVTGYSPSDPREAY VLRLAITLGRLRS >gi|302034487|gb|GL383264.1| GENE 173 159472 - 162225 2494 917 aa, chain + ## HITS:1 COG:Cgl2195 KEGG:ns NR:ns ## COG: Cgl2195 COG2609 # Protein_GI_number: 19553445 # Func_class: C Energy production and conversion # Function: Pyruvate dehydrogenase complex, dehydrogenase (E1) component # Organism: Corynebacterium glutamicum # 10 902 20 907 922 1204 64.0 0 MIPREERGPVLNGLPTTLPDVDPEETQEWIESLDKMVETDGPNRARIVLLKMLERARSHS RLGLSALTSTDYINTIAAEDEEEYPGDAEIERNIRRLLRWNSAITVHRAQRPGIGVGGHI STYASAVTLYEVGQNHFWRGQDAPGGGDQVFFQGHAAPGMYARAFLEGRLSEDDLDGFRQ EKSKAGHGLPSYPHPRMLPDFWQFPTVSMGLGPMNSIYQASMNKYLTNRGVKDCADQHVW AFLGDGEMDEPESRGFLQVAANEELDNLTFVINCNLQRLDGPVRGNGKIVQELEAVFRGA GWNVIKVIWGSGWDPLLQADRDGALVDIMNNTRDGDYQTFKANDGAYVREHFFGRDPRTA KMVDKWTDEQIWALRRGGHDYRKIYNAYKAATQFKGAPTVVLACTIKGYDLGTHFAGRNA THQMKKLALEDLKQFRDRLEIPISDKVLEADPYRAPYFHPGADDERIQYLMERRRALGGF VPERRTRHTPLPIPAQKAFDGVKRGSGKQEVATTMAFVRLLKDLMRDKNFAPHVVPIIPD EARTFGMDSFFPTIKIYNPHGQNYTPVDHELMLSYREAKNGQIIHTGINEAGSAAAFIAA GSAYSTQGVPMVPIYLFYSMFGFQRTGDSFWAAGDQMTRGFIIGATAGRTTLTGEGTQHM DGHSPVLAATNPAVISYDPAYSYEISHIVQAGLEHMYGENAEDVMYYLTVYNEPIVQPAE PEGVDAEGIVKGMYLLSKGSFEGVGEDARRVQLLASGVAVPWAIEAQQLLKGDFGVVADV WSVTSWNNLRRDAMEAEEQTFLHPEQGRRTPYITQCLADAPGPVVATTDYTCQVPDQIAQ WVPGDYASLGADGFGFSDTRAAARRFFHIDGPSMTVRALQMLVERGEVPEDWPAKAAEKY DLLNVNAGASGNAGGDA >gi|302034487|gb|GL383264.1| GENE 174 162397 - 163305 307 302 aa, chain + ## HITS:1 COG:no KEGG:PPA0990 NR:ns ## KEGG: PPA0990 # Name: not_defined # Def: endo-beta-N-acetylglucosaminidase H (EC:3.2.1.96) # Organism: P.acnes # Pathway: Other glycan degradation [PATH:pac00511] # 1 302 1 302 302 600 100.0 1e-170 MRLSRRHVLASTVGVVSTALITAQTPAGIAFARPRRASRAVTTAVYIEVNHEDLATVGAF VREGVHRPVFDLAMIFAANINYDGCTAYLHLNERVMETLRAAETQIRPLQRRGTKVLLSL LGNHEGAGFANFPTRHDADRFAAQVASVVHRYHLDGVDLDDEYSEYGKNGTGQPNEDFFV WFVRALRRHLGPHKLLTLYSIGPSVNRTVSSAGNASDDLDYAWNPWYGTYQEPSVLGMPR SHVGAAAVDWGHTSIEMIQTMASQTIHDGYGVFMTYDLRVSTNPSLVQAMTTALEGRRRL RQ >gi|302034487|gb|GL383264.1| GENE 175 163359 - 163814 386 151 aa, chain + ## HITS:1 COG:no KEGG:PPA0991 NR:ns ## KEGG: PPA0991 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 18 151 1 134 134 209 98.0 2e-53 MKVRTSCHAEQGKAKDFVGSGSDLDKLGFEAGQVVQELGWDDDVDEDLRQEVMDIIDGDM IEDSIDAVDIVWLWLRADDGDVADGLVDAMRDLSDDGFIVLVTPKVGRPGTIDPADLSDG TDTAGMVLTTSYDVSKDWQAHKIVRPRGGRR >gi|302034487|gb|GL383264.1| GENE 176 163826 - 164071 212 81 aa, chain - ## HITS:1 COG:TM0025 KEGG:ns NR:ns ## COG: TM0025 COG1472 # Protein_GI_number: 15642800 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase-related glycosidases # Organism: Thermotoga maritima # 2 67 617 683 721 61 43.0 4e-10 MLTVTFTVSNTGDRAGAAVPQVYPGFPNTTIDRCVRELKAFRRVELEPGQRQTVTVALTR RDLSYWDILPHPLRSYAVGSI >gi|302034487|gb|GL383264.1| GENE 177 164345 - 164926 433 193 aa, chain - ## HITS:1 COG:MT2103 KEGG:ns NR:ns ## COG: MT2103 COG1335 # Protein_GI_number: 15841531 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Mycobacterium tuberculosis CDC1551 # 6 191 2 186 186 169 50.0 3e-42 MTSSHRALLVVDVQPTFCEGGALAVTGGNACAERIATYIPTHYNCYDMVVTTQDWHIDPG NHFSNNPDFVDSWPPHGVVGTDEAEIHPAIAKIPVDARVKKGQYAAAYSGFEGTTEDGSI LETVLRDRGIEAVDIVGLALSHCVKDTALDAQRLGFVTTCLTDLSEPVSPEMGNAAVAVM EDAGVTVTTSSQL >gi|302034487|gb|GL383264.1| GENE 178 164971 - 165981 768 336 aa, chain + ## HITS:1 COG:mll3309 KEGG:ns NR:ns ## COG: mll3309 COG0667 # Protein_GI_number: 13472878 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Mesorhizobium loti # 6 329 3 326 348 421 64.0 1e-117 MAVSTYEAAQDRYDTMEYRRCGTSGLLLPAVSLGLWHNFGDFHPGSTQRAVLRRAFDRGI THFDLANNYGPPYGQAEINFGRIMATDFKPYRDELIISSKAGYDMWPGPYGQGGSRKYLI ASCDQSLKRMGLDYVDIFYSHRFDPETPLEETMGALDRIVRSGRALYAGISSYDPKETER AATIARDLGTPLLIHQPRYNMFDRWIEDGLVDTCEQEGMGIICFSPLAQGILTDKYLRGV PAQSRAGMGAVSLRPDQIDDVTRAAIAALNEVAKDRDQTLAQMALSWILREPRITSVLVG ASSVPQLDSDIDALRTTPFTDDERVRIESVLADHVL >gi|302034487|gb|GL383264.1| GENE 179 166133 - 166708 478 191 aa, chain + ## HITS:1 COG:lin1954 KEGG:ns NR:ns ## COG: lin1954 COG2065 # Protein_GI_number: 16801020 # Func_class: F Nucleotide transport and metabolism # Function: Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase # Organism: Listeria innocua # 10 187 5 181 183 190 58.0 1e-48 MQLTQSSGPVTVLDSKALERALTRICYEIVERNEGLDQLVIVGIRTRGAYLARRMATKLS SLGDVDVPVSELDITLYRDDLDPNEHRERPKTPVLSGNNVPSNLAGKTVVLVDDVLFTGR TVRAALDALVDTGRPDRILLAVMVDRGHRELPVRADFVGKNIPTSLGEAVDVHVTEVDGE DSVTIRKVASR >gi|302034487|gb|GL383264.1| GENE 180 166705 - 167649 766 314 aa, chain + ## HITS:1 COG:L45002 KEGG:ns NR:ns ## COG: L45002 COG0540 # Protein_GI_number: 15673584 # Func_class: F Nucleotide transport and metabolism # Function: Aspartate carbamoyltransferase, catalytic chain # Organism: Lactococcus lactis # 20 314 15 310 310 327 54.0 2e-89 MSTEVVEEFDADYTGRHFLSVEDMSSDDVMRIIERGRQFKAGDAPRVEPGHVAINMFFEN STRTMTSFQMAEHRLGMKILDFDPGHSSVTKGESLYDSVRTVDAIGAEVAVIRHSTNHYY DYLLATGMLGLSVVNGGDGSGQHPSQCMLDLMTIAEEFGHVDGLTVAISGDIVHSRVARS DAQILTRLGANVVFTGPREWMDHDVTRLGTMATLDEVIADVDVAMMLRVQHERFDAGPDF SATDYLHTFGLTDERAERMKPHAIIMHPAPVNRGCEISGHLVEAPSSRIFEQMGNGVMVR MAILEQVLHGRETK >gi|302034487|gb|GL383264.1| GENE 181 167646 - 168983 1092 445 aa, chain + ## HITS:1 COG:lin1951 KEGG:ns NR:ns ## COG: lin1951 COG0044 # Protein_GI_number: 16801017 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase and related cyclic amidohydrolases # Organism: Listeria innocua # 23 431 21 424 426 410 50.0 1e-114 MSRRVLLTGLTMLVGATPVPSQLLIRDERIEAISRGRSNALDGADAEVVDLGGALVTPGM VDLHVHLREPGQEHKETIASGTAAAARGGWTTICAMPNTVPDPHSPELMADLNRRVEESA VVRVLPIAPITVGLTGNDLVDVEALTRAGAVAFSNDGKGVQLAGVMYDAMRSAAAVDRPI AAHAEDESLVRGGVINDGRRARELGLPPMTRLTETVQVARDVMIAEETAAHYHLCHASTR QSIRTLRRGREDGANVTGEAAPHHLLLADDDIPDDDGFYKMNPPLRTRDDLNAMVEGLCD GTLTCIATDNAPHAAEEKACSFRDAAFGVITNEHTFALLYTNFVLDRRFRLDQLVDWLTI GPAETFGIPEAGRLRVGGPADLAAFDLRTEMTIIPGDGAGMGRNTPFAGRSVRGDCVLTM VGGQTVYRRGQPIGKTDDHEMGDPQ >gi|302034487|gb|GL383264.1| GENE 182 168980 - 170068 887 362 aa, chain + ## HITS:1 COG:SP1276 KEGG:ns NR:ns ## COG: SP1276 COG0505 # Protein_GI_number: 15901136 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase small subunit # Organism: Streptococcus pneumoniae TIGR4 # 1 354 1 353 359 451 59.0 1e-126 MSRRTLLLADGTSYQGEAFGADREVSAEVVFTTGMTGYQETLTDQSYNGQIVTFTYPLIG NCGINRDDMESLFPTTAGVICREVPRLASNWRNRRSLGEFLTTHGIPGLAGIDTRALVRR LRTAGVMKGVLLAPDADLDAELGKLRNIHLPTDQIAQVSTRTAYPSPLGGRSVVLFDFGL KHSILRELSRRGCAVTVVPWNISADRVRALAPDGIMLSNGPGDPKSIPGVQDVVRELQEG YPVFGICMGHQIFALANGADTYKLRFGHRGFNHPVRELSTGRIDFTSQNHGYVVDPESVS GTELEVTHIEINDETVMGVRHTRLGSFSVQYHPDAAAGPHDAAHVFDDFVALMDANHTGG QN >gi|302034487|gb|GL383264.1| GENE 183 170068 - 173274 2807 1068 aa, chain + ## HITS:1 COG:SP1275 KEGG:ns NR:ns ## COG: SP1275 COG0458 # Protein_GI_number: 15901135 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase large subunit (split gene in MJ) # Organism: Streptococcus pneumoniae TIGR4 # 1 1068 1 1058 1058 1494 70.0 0 MPRRTDLHRILVIGSGPILIGQAAEFDYAGTQACLALKEEGYEVILVNSNPATIMTDRDV ADKVYIEPITLEFVSSILRRERPDAIVPTLGGQTGLNMATELAKSGILDELGIELLGTKL SAIEKAEDRDLFKQLMDELGQPVPASEVVHTVDEAVKVGNTIGYPLIVRPAYTLGGTGGG MCCDEAELVRIVGKGLELSPVTECLIEQSIAGFKEIEYEMMRDGADNTMVVCTMENFDPV GVHTGDSIVFAPTQTLTDVEHEMLRDASIEIVRRLGIEGGCNVQLALDPNSFQYYVIEVN PRVSRSSALASKATGYPIAKIAAKIAVGLTLDEIRNPVTGTTWSMFEPMLDYVVAKIPRW PFDKFAQADRRLGTQMKATGEVMALGRTIEESLLKAVRSLEIGVDHLALREVADLPDDIL EERLLHARDDRLFCLTEAIRRGRTVQELHEQTRIDVFFLDKVAHILEIEERLRACPDDSE ALWIAKRNGFSDPAIARIWGETPDDVRVRRVDNGIVPVYKMVDTCAGEFESSTPYFYSTY EMENESKKSQRPSVLVLGSGPIRIGQGIEFDYATVHSVKAIQAAGYEAIIMNSNPETVST DFSISDKLYFEPLTFEDVMNVIDLEQPDGVIVQFGGQTAINLAGPLSAAGVPILGTQVAD LDRAEDREGFESLLAELGIPQAPGGTARSSEEAFAVAEELGYPVLVRPSYVIGGRAMAIV TSAEELKRYMRDAVHASPDKPVLVDRYLNGLECEVDAICDGTDVLIPGIMEHIERAGVHS GDSMAVYPPQRMSQQVADRIIEVTTKLARGLKTKGILNIQFVVANDPATGEETVYVIEAN PRASRTVPFLSKVTGVSMAEVATRIILGETLADLGLRPGLLPFSKRIHVKSPVFSFSKLD LVDSHLGPEMKSTGEVMGSDDTVEKALYKVFEAANLHVPEYGKILITVTDDAKPEALQLA RRFDRIGFQLVGTMGTARFFDEGGLRIDVAEKIGSGEAGSTESVLDLISRNGCDAVINVM GNGQDTIIDGKQIRREAIARGIPLFTSLDTAAAICRVMESRVFSTESI >gi|302034487|gb|GL383264.1| GENE 184 173313 - 174068 436 251 aa, chain + ## HITS:1 COG:lin1948 KEGG:ns NR:ns ## COG: lin1948 COG0543 # Protein_GI_number: 16801014 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases # Organism: Listeria innocua # 1 251 6 254 254 202 44.0 4e-52 MRLADRHEIATGIYSVRLIPHEPVPHVVPGTFLDLLLGGGHVLRRPLSIADADDEGYTLV FRVVGKGTDTLSVKPIGAEVDVLGPLGHGFDVDAVQPEGRALLIGGGVGIPPLYLLGRRL VERGVEVQFRLGFRDRNDIFWAERFGQLGEVLVSTDDGSVGTKGTVAQIAETDEARRFVP DLVQACGPLPMLRWVKSALAPTVRTQLSLEERMACGVGACYACVVGDARDPDHQFRVCFD GPVLAAEEVLL >gi|302034487|gb|GL383264.1| GENE 185 174065 - 174988 874 307 aa, chain + ## HITS:1 COG:L182555 KEGG:ns NR:ns ## COG: L182555 COG0167 # Protein_GI_number: 15673328 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotate dehydrogenase # Organism: Lactococcus lactis # 3 307 6 310 311 388 66.0 1e-108 MTRLAVSLPGLNLKNPIMPASGCFGFGAEYAEYYDLSVLGSIMVKATTLEPRRGNPVIRV AETPGGMLNAIGLQNPGLDVVMAEKLPWLAEHFPDLPIIANVAGYTTEDYVRVCEVISTA PNVAAVEINISCPNVKRGGITFGTNVTAAHDLTQAVVAAASVPVYVKLSPNVTDITEIAR ATADAGADGLTLINTLTGMRINLARRTPVIANATGGLSGPAVLPIAVRMIDAVTRVVDIP VIGMGGVMTSADALELMMAGASAVGVGTANFTDPLACPKIINGLEPLMDDLSIASLEDLR TQVRQSR >gi|302034487|gb|GL383264.1| GENE 186 175014 - 175724 545 236 aa, chain + ## HITS:1 COG:SP0701 KEGG:ns NR:ns ## COG: SP0701 COG0284 # Protein_GI_number: 15900600 # Func_class: F Nucleotide transport and metabolism # Function: Orotidine-5'-phosphate decarboxylase # Organism: Streptococcus pneumoniae TIGR4 # 5 230 5 228 233 253 59.0 1e-67 MDITRPIIALDLPSAEAALDFVGRFDGENLFVKVGMELFYAAGPSVVTSLKEAGHDVFCD LKLHDIPNTVKGAASSLSRLGADLLTVHAAGGRSMMEASLEGLGDAAETTRVIAITQLTS TSPEALKTEQLVDVPLVESVRNYAKLAQAAGLAGVVCSAHEAADIASVTGPNFLRVTPGI RPAGSAVGDQSRVATPGNAASMGSSAIVVGRPITKADDPVAAYHAIRDDWNAGRKA >gi|302034487|gb|GL383264.1| GENE 187 175752 - 176402 522 216 aa, chain + ## HITS:1 COG:lin1945 KEGG:ns NR:ns ## COG: lin1945 COG0461 # Protein_GI_number: 16801011 # Func_class: F Nucleotide transport and metabolism # Function: Orotate phosphoribosyltransferase # Organism: Listeria innocua # 8 212 3 207 209 229 54.0 3e-60 MTVTNNEIAREFAERLLAIEAVSLSPDAPFTWASGLHSPIYCDNRVTLSDPQTRDLIADG LASLVRTNFHQVDVVAGTATAGIAHAALAADRLGAPMAYVRSVPKDHGRGNQIEGRIPAH SKVIMVEDLISTGGSVLKAAQAVEREGSTVVGVLALFSYELEKGHRAFEKAGVPLYTLSN YPILIEVAAESGRITSEQQATLATWSSDPQAWSDAH >gi|302034487|gb|GL383264.1| GENE 188 176783 - 177589 544 268 aa, chain - ## HITS:1 COG:Cgl2483 KEGG:ns NR:ns ## COG: Cgl2483 COG3001 # Protein_GI_number: 19553733 # Func_class: G Carbohydrate transport and metabolism # Function: Fructosamine-3-kinase # Organism: Corynebacterium glutamicum # 19 256 4 233 249 129 38.0 4e-30 MDEVVSTASYASTVGSMTFRKTDHHKNAIDYEVAGLMWLAAARPDGAGIVEVLDHGKGWL TEPELSTGHPTREAAEDFGRRLAHTHAAGASHLGAAPDGFVPDDGYIGRAPLPLPSEPIS SWGEFYAQYRIEPYMDSLDADARAIMSKLVDRLASGALDHDEPALVTCPAARTHGDMWAG NLMWTPDGVVLIAPAAQGGHAEEDLAALSVFGAPFAERIRAAYNEESPLADGWEDRIGLH QLHMLIVHCWLFGGGYVDQTVAIARRWV >gi|302034487|gb|GL383264.1| GENE 189 177636 - 179045 1321 469 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229861541|ref|ZP_04481155.1| SSU ribosomal protein S12P methylthiotransferase [Stackebrandtia nassauensis DSM 44728] # 1 464 1 457 464 513 58 1e-144 MSMGCARNDVDSEELAARMEAGGFRLVDDPAEAETVVVNTCGFIEQAKKDSVDTLLAAAD LKGNGITTSVVAVGCMAERYGRELAESLPEADAVLGFDDYGDIAGRLRTILDGGSLETHV PRDRRTLLPISPVDRPTARAEVSVPGHGTAPDLSASVTPDSGPRATRRRLGTGPSAPLKM ASGCDRRCAFCAIPHFRGSYLSRPIAEIVEEARWLVDHGVKEVFLVSENSSSYGKDLGDL RLLEKLLVNLDQVDGLEWIRVSYLQPAELRPGLIDTILATDKVVPYFDLSFQHASGPLLR RMRRFGDAESFLNIIDSIRSRCPEAGLRSNFITGFPGETDADVAVLADFLQRARLDVAGV FAYSDEEGTEAAGLDGHVDEDVVTARREDLADLTDELVSQRAEDRIGTRGRVMVEEIDEA VIGRAEHQGPEVDGCVTLVDAAAVSVGDIVDVEFVGSDGVDLVARPANA >gi|302034487|gb|GL383264.1| GENE 190 179154 - 179768 629 204 aa, chain + ## HITS:1 COG:Cgl1919 KEGG:ns NR:ns ## COG: Cgl1919 COG0558 # Protein_GI_number: 19553169 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylglycerophosphate synthase # Organism: Corynebacterium glutamicum # 7 183 27 202 208 138 44.0 5e-33 MATKKDRPSSINVPNALTLLRVVAVPIFGWMLLAHAHEGGWRTTTTIVFMVAILTDFVDG KVARKYNLVTNFGKIGDSIADKALTGMAFIGLSIIGELPWWMTIIILLREWGITVMRMKM LKYKVMAANKGGKLKTAMQSLAITLFCLGLWRMPTFVYVIAWAVMIIAFVLTVITGLVYI RDAILIRNRAKMTESRPARKRTLK >gi|302034487|gb|GL383264.1| GENE 191 179765 - 180250 228 161 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 7 151 753 897 904 92 36 3e-17 MTGDEGARRLIAVLSEHGMTAATCESLTAGLVAATITTVPGASTVFRGGLVTYASELKST LARVDAQWIAENGVINSITAAQMAMGCRKVCDADLGMACTGVAGPDPQDGEQAGTVFIAV VYRGAPVVKRLQLEGSREEIRCGTVERLLDLGCEVVLGSEG >gi|302034487|gb|GL383264.1| GENE 192 180352 - 180627 393 91 aa, chain + ## HITS:1 COG:MT2816 KEGG:ns NR:ns ## COG: MT2816 COG1396 # Protein_GI_number: 15842285 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Mycobacterium tuberculosis CDC1551 # 3 80 2 79 112 78 60.0 3e-15 MKSTLLREMLGESLREQRFAQGRTLREVSSAARVSLGYLSEVERGQKEASSELISAICTA LDLPQSDLMRIVSDKMLKNEDAPEHRITVAA >gi|302034487|gb|GL383264.1| GENE 193 180729 - 181532 608 267 aa, chain - ## HITS:1 COG:YPO0831 KEGG:ns NR:ns ## COG: YPO0831 COG1349 # Protein_GI_number: 16121139 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Yersinia pestis # 14 261 6 253 258 123 33.0 4e-28 MPSDAHSTSSRRNDRMVAILAMLRDRDEVPLRDMASALGASAATIRRDVVSLAEQGLLIR SHGTARRAGTGAELPVNLRDGRRRRAKEAIAHAVASELPIGRHAIGLTGGTTTTEIVRAL HHRHDLTLITNSVSIALEAASQGQQRVLITGGVLRPSSLELVGSLAESTFKQVNVGTAIV GCDGMSAEGGLTTHDGIEAATNHTMIKRAAHIIAAVDGSKIGRVTLAKLAEAKDVDLLIT DDSADPEELARLRALGIAIRIVHAPID >gi|302034487|gb|GL383264.1| GENE 194 181883 - 182077 176 64 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4070 NR:ns ## KEGG: HMPREF0675_4070 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 64 1 64 64 107 100.0 1e-22 MTETQLWTRLAEALGDDYCRIWAAQQAVPGLDSRTVQEALADGVDAKMIWRACWKTLELS DSLR >gi|302034487|gb|GL383264.1| GENE 195 182388 - 183434 1077 348 aa, chain + ## HITS:1 COG:Cgl1910 KEGG:ns NR:ns ## COG: Cgl1910 COG0468 # Protein_GI_number: 19553160 # Func_class: L Replication, recombination and repair # Function: RecA/RadA recombinase # Organism: Corynebacterium glutamicum # 6 330 17 341 376 475 75.0 1e-134 MAATADREKALATALQQIEKQHGKGSIMRLGEQETVKIAAIPTGSVALDVALGVGGLPRG RIVEIYGPESSGKTTVALHAIANAQAEGGICAFIDAEHALDPEYARKLGVDTDSLLVSQP DNGEQALEIADTLVRSGALELIVVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKMT GALNAAGTTAIFINQLREKIGVMFGSPETTTGGRALKFYSSVRLDVRRVETLKDGSEMVG NRTRVKVAKNKVAPPFKQAEFDILYGQGISREGSLIDMGVDCGIITKSGSWFSYNNEQLG QGKENVRKFLRGNPDVANEIEDKILTHLGLREAEVPEGVDPRTGEVEF >gi|302034487|gb|GL383264.1| GENE 196 183464 - 183979 221 171 aa, chain + ## HITS:1 COG:MT2805 KEGG:ns NR:ns ## COG: MT2805 COG2137 # Protein_GI_number: 15842275 # Func_class: R General function prediction only # Function: Uncharacterized protein conserved in bacteria # Organism: Mycobacterium tuberculosis CDC1551 # 8 152 19 167 178 95 43.0 3e-20 MTDDQWYEEAREICLKRLDRRANTRGELADILDSKGVPEPVREAVLDRLTEVGLIDDADF ANRWTASRHGMRGLSRRAVAAELSRKGVDSHVIEDATSQITDADELDAATELAITKLRAG RGIEEARLTRRVLGTLARKGYGPHIAWAAICAARDELGEEPPEAPTTGLFD >gi|302034487|gb|GL383264.1| GENE 197 184083 - 185711 982 542 aa, chain + ## HITS:1 COG:CAC1816 KEGG:ns NR:ns ## COG: CAC1816 COG1418 # Protein_GI_number: 15895092 # Func_class: R General function prediction only # Function: Predicted HD superfamily hydrolase # Organism: Clostridium acetobutylicum # 50 537 33 511 514 318 40.0 2e-86 MLIALIAVSVLAVAAIIGSLTDRRAIGRRAERAESERDVKALELSRSQERLSRASQDLAD SRKDVAKARAELESSRTRASDEARRADNADQARRSAEALLEINRRSVEELTERDHRLQEA RRHLEEGLDKIEQDRLELAERSSQLDERDAELDRRHGQIVTELERVAGMSLDEARDELVE HLGREARVFAENSARAIVTEATASAEARARHIVAEVIQRCSSEMVADTVVSVVPLPSNEM KGRVIGREGRNIRTFEQVTGVTVIIDDTPEIVLLSCFDPMRREVARQALTDLVEDGRIHP ISIERAHQRAVDRIEDMCLDAAADALSRAGIDDIDDRLLPILGSLRFRTSYGQQVLDHCV ECARLAANLAAEIGADIEICRRAAFLHDLGKSLTPGVEGSSHAAIGAELARRYGESEEVI HAIAAHHDEIDPVSVTDFIVKAADAISAARPGARRESLEAHVRRMDTIEEIATSFPGVVR AFALQAGREMQILVDPGAVDDHQASRLARQIALAIGEQVTVPGRTRVTVIRSFQAIETVG DA >gi|302034487|gb|GL383264.1| GENE 198 185752 - 186651 509 299 aa, chain - ## HITS:1 COG:ZyihR KEGG:ns NR:ns ## COG: ZyihR COG2017 # Protein_GI_number: 15804465 # Func_class: G Carbohydrate transport and metabolism # Function: Galactose mutarotase and related enzymes # Organism: Escherichia coli O157:H7 EDL933 # 9 298 9 295 300 153 31.0 5e-37 MINDAILPTGTQYEISHGPWQAIVTEQGATLRSLHYEGTDVIKSFDADQSPTSSQGQQLL PWPNRIRDGHYTFDGMEQQLAVSEVDRHNAIHGLVAWSRWSLVEHTDTSVTQTIRIMARP GWPGTISVRLTHRLSDAGLAVEVTARNVGTTAVPFGYAAHPYLCLGGTIDDWTVDAPFTS WLQVDDRLLPMQMREMDSIHTLNGLTVGQRTFDTAYTVKGDGTVGSPAWRIRVSNGETSH ELWGDAAMSWVQIYTPDDRHSLAVEPMTCGPDAFNEGPTHGDVIRLEPGNDVTLHWGIA >gi|302034487|gb|GL383264.1| GENE 199 186601 - 186807 127 68 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|314962818|gb|EFT06918.1| ## NR: gi|314962818|gb|EFT06918.1| hypothetical protein HMPREF9618_02147 [Propionibacterium acnes HL082PA1] # 26 68 1 43 43 70 95.0 3e-11 MGDLILGAGGEYGVIDHGERLAPCALRARVFKPRCLRISGGDAIVHGVTVPSEGSVSVIG RFAVARRK >gi|302034487|gb|GL383264.1| GENE 200 186815 - 188356 1321 513 aa, chain + ## HITS:1 COG:SA1014 KEGG:ns NR:ns ## COG: SA1014 COG1288 # Protein_GI_number: 15926754 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Staphylococcus aureus N315 # 8 513 11 516 518 595 60.0 1e-169 MSSNDAIEARHRLRVPSAFTILFVLTVLAVVCTWFIPAGSYSKMSYAAGSNQLVIVDPNG ATTKHTATQATLDKYGVAMKISEFTSGSITGSVSVPGTYERVASHPAGIGDITNGMVTGT IEAVDIIVFILVLGGLIGVVKASGAFEAGLGRLTARSKGKEFLLVLFVSLFMIVGGTTCG LEEEAVAFYPILAPVFIVMGYDALVVVGSIFLAGSIGTCFSTINPFSSAIGANAAGIRLT EGMTWRVIGLVGGAIAVVLYLAWYSKKVKANPGFSYAWEDREAFAAQWSLGNDGAEIGFD WRRKVILFLFAAAFPIMVWGVMARGWWFPAMASSFLAITIIIMLIAATGTNKLSEKELVD SFSAGSSSLVAVSLIIGLARGINHILNEGLISDTLLYESAKVVSHVSGPVFVLSLLIVFF LLGFIVPSSSGLAVLALPIMAPLGDTAGVSRATVLCAYQWGQYAMLFLAPTGLVMATLQM LDIKYSHWLKFVWPLVVFVLVYGGILLVLQTVV >gi|302034487|gb|GL383264.1| GENE 201 188417 - 189901 535 494 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227395721|ref|ZP_03879044.1| SSU ribosomal protein S12P methylthiotransferase [Haliangium ochraceum DSM 14365] # 17 453 4 452 461 210 31 7e-53 MPNNTLQHTEAPTYRVVTYGCQMNVHDSERIAGLLEEAGYVPDPRTDTLAPADVVVFNTC AVRENADNRLYGTLGHMAAVKSAHPGMQLAVGGCMAQKDKDTVVARAPWVDVVFGTHNVG SLPVLLKRARHNATAQVEIEESLVTFPSNLPARRDSAYSAWVSISVGCNNTCTFCIVPQL RGKETDRRPGEILSEIRALVNEGVQEITLLGQNVNSYGVQFGDRGAFAKLLRACGNIDGL ERVRFTSPHPAAFTDDVIEAMAETPNVMPSLHMPLQSGSDEVLRRMRRSYRSTKFLGILD RVREAIPHAAITTDIIVGFPGETDKDFAETMRIVEESRFSAAFTFQYSIRPNTPAGVMKD QVPKPVVQERYEQLVELVDDIAWQENKAQVGRAVEVMFAQGEGRKDEATHRVTGRARDNR LVHVSLNPGDDVPRPGDIGEVVITSGHPHHLVADGGLVNLRRTRGGDAWHARQGQVSQGT PTVLGLPTVGVPRH >gi|302034487|gb|GL383264.1| GENE 202 190052 - 190252 308 66 aa, chain - ## HITS:1 COG:no KEGG:PPA1018 NR:ns ## KEGG: PPA1018 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 66 1 66 66 73 100.0 3e-12 MGLFDKAKDAISDRQDDIKNQASQHSDQVEQGIDKAGNAVDDKTGGKFSDQIDKGQDALK DKLGDL >gi|302034487|gb|GL383264.1| GENE 203 190371 - 191330 732 319 aa, chain + ## HITS:1 COG:MT2799 KEGG:ns NR:ns ## COG: MT2799 COG0324 # Protein_GI_number: 15842265 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA delta(2)-isopentenylpyrophosphate transferase # Organism: Mycobacterium tuberculosis CDC1551 # 12 304 4 299 314 219 46.0 4e-57 MRKNEYVNLPVICLVGPTASGKSGLAVRVCRRLYVDEHPAEIINTDSMVVYRGMDIGTAT PTLREQRTVVHHLVSILDVTVPSSLVLMQTLARDAVEDCLSRGVIPVLVGGSALYTKAII DEMSIPPTDPEVRARWQEKLDAEGPRVLHDELARRDPKAAESILPGNGRRIVRALEVIDL TGSFTATIPDGTLHWPKTVQMGLELSRKDIDQRIADRVDQMWAYGFVDEVRSLANVGLRE GLTASRALGYRQVLEYLNGDYDEDEARRRTIIGTRRFARKQLMWYRRDDRIEWFNALAPD LDDRVVARVLTALTTDEED >gi|302034487|gb|GL383264.1| GENE 204 191335 - 192156 542 273 aa, chain + ## HITS:1 COG:Cgl1898 KEGG:ns NR:ns ## COG: Cgl1898 COG0253 # Protein_GI_number: 19553148 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate epimerase # Organism: Corynebacterium glutamicum # 4 270 7 277 277 190 45.0 3e-48 MTTFWKGHGTGNDFVIVDQQDPLTSAQVRWLCHRRFGIGADGTLQALRAGDVEDWNGDPD LWFMDYRNADGTIAEMCGNGLRVFARYLVQTGRMTTTEADVATRAGVRHVRLHDGGDVSV TMGTVRVESGKVTIEHQDMWWPACKVDVGNPHAVVVTDHTTVCGINLNDSPTWRPRSAFP DGVNVEFVEQIDQHTVAMRVHERGSGETMSCGTGTVAVAATMATRTGHRGPWTVQVPGGR VVVTLSPSDDGYRAILTGPAVILAAGKVDLPNG >gi|302034487|gb|GL383264.1| GENE 205 192211 - 193692 618 493 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 [Roseobacter sp. AzwK-3b] # 90 471 26 407 425 242 40 2e-62 MALGREDGYRVSEIEQIDNEREDALKNNNGFSEDQSDYDGDQFDLDARLSLTRVPGMSTD LSDISEVEYRQLRLERVVLCSVWTQGTAADAENAMAELKALAETAGSQVLEAVMQHRTTP DPATYIGSGKVAELAEVVWATGADTVICDGELDAAQLRNLEDRVKVKVVDRTALILDIFA QHARSVEGRTQVELAQLNYLKQRLRGWGGNLSRQTGGRAAGGAGIGGRGPGETRIETDRR RISHRIAVLRRRLTHIESTRASKRADRIRNKVPSVAIVGYTNAGKSSLLNRLTRAGVLVE NALFATLDPTTRRATTSDGRVYTLTDTVGFVRHLPHDLVEAFASTLEETAMADVLLHVVD ADDPDPLGQVDAVRGVLSGIGASNIPEILVLNKIDRLSDETILTLRSTFPGAYLVSAHTG EGIDKLVEAIEAGLPIPSQRVDVVIPYARGDLMDKIHHNGTIGLIDHTADGTHVVAHLHP ALAAEVEEACDGV >gi|302034487|gb|GL383264.1| GENE 206 193682 - 195733 1037 683 aa, chain + ## HITS:1 COG:Cgl2468 KEGG:ns NR:ns ## COG: Cgl2468 COG1199 # Protein_GI_number: 19553718 # Func_class: K Transcription; L Replication, recombination and repair # Function: Rad3-related DNA helicases # Organism: Corynebacterium glutamicum # 3 681 10 662 665 529 46.0 1e-150 MGSEPADVSQMCRDLLSTAVSEMGGQERPGQVAMAKAVDQAMRDKLHLLVQAGTGTGKSL GYLAPALVYCVEKGAQVIVATATLALQTQLAYKDIPTILDASEKVLSRRPRVAVLKGRNN HICLHKVRGGSTRTKGQDALVPGADLVVAAADDGREVEAAPESTLGAEVVMLREWAEKQV EESGLGDRDDAPAHTPLAWTQVSVPANECLGVQRCPFGSECLSEAAREQARNADLVVTNH AMLAIDALNGGRVLPEHDTVIIDEAHELVNRFTRAASKDLSPAIVTTTAKRAMTWLDDDV GADLLNQADSMDHALEATVPGRVTTPDAQVIQTCAVLRDLARVAVSQLGRNDEDSREPVD AERAQAQAAMREVFETAECMVRLAAADVVWVSESEKGYRSIHVAPLSVGGLLRENVFAQS TTILTSATLCIGGNFLAIARDVGLSPLEQIEGDAPEILETQMGWRGVDVGSPFDYSKQGI LYVGRSLPRPGRDGIAPEVLDDLAELVWAAGGRTLGLFSSQRNAIAAAEHMRSAMPDIPV LCQGEGHLADLTRRFAADPRTCLFGTVSLWQGVDIPGDTCRLVVIDRIPFPRPDDPLMAA RSKAVEDAGGNGFMTVSAGHAALLLAQGAGRLIRRADDRGVIAVLDPRLVTARYGNFLRA SMPPFWTTTDREMAVGALRRLAE >gi|302034487|gb|GL383264.1| GENE 207 195843 - 196517 472 224 aa, chain - ## HITS:1 COG:ML1003 KEGG:ns NR:ns ## COG: ML1003 COG1974 # Protein_GI_number: 15827479 # Func_class: K Transcription; T Signal transduction mechanisms # Function: SOS-response transcriptional repressors (RecA-mediated autopeptidases) # Organism: Mycobacterium leprae # 29 224 24 235 235 67 27.0 2e-11 MITDTPGTDTSDPAAVSSAVPFTNTREPSAKEREVLAAVKEGLRRDGKAPTVRALAEMTG AASTSTVQRRISSLIDLGLLRRTNGTLEVVEETVESSDPHGPQAFQVKLLNPSNEEHDET VIAVPPQLLSHGEHAVIIVRDDGMSPDIHSGDLVVVRRISVSDLPDDPPETYLVAATAGG TTVVRTLSNVSGRRWLLASNPTHSPINLDDASLLGQAVSLLRRL >gi|302034487|gb|GL383264.1| GENE 208 196785 - 197135 180 116 aa, chain + ## HITS:1 COG:no KEGG:PPA1024 NR:ns ## KEGG: PPA1024 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 116 42 157 157 217 99.0 1e-55 MSAQTYEWYIETTSSRRGDLVVGPWQDELAEPVVVIDRRELMAGRPSATARRKSLHNRFW DAAVLATIAVVIVGVILALGRLGQMWQGDPASGHEDHMGVVQVDAHQPGAPSDARS >gi|302034487|gb|GL383264.1| GENE 209 197360 - 197866 378 168 aa, chain + ## HITS:1 COG:MT2791 KEGG:ns NR:ns ## COG: MT2791 COG1327 # Protein_GI_number: 15842256 # Func_class: K Transcription # Function: Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains # Organism: Mycobacterium tuberculosis CDC1551 # 1 145 1 145 154 175 63.0 3e-44 MRCPFCQHDDSRVLDSRVCEDGTAIRRRRQCPMCERRFTTIERMQMTVHKRNGIEEPFSR DKVIRGVRNACKGRPVTDADLALLGQRVEDGLRARGVAEIPSEEIGLAILGPLRELDSIA YLRFASVYLNYNTIEDFATEIDRLRDESSDKTKSSSRKRLSKQDEPLF >gi|302034487|gb|GL383264.1| GENE 210 197948 - 200800 2451 950 aa, chain + ## HITS:1 COG:CAC1047 KEGG:ns NR:ns ## COG: CAC1047 COG0209 # Protein_GI_number: 15894334 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, alpha subunit # Organism: Clostridium acetobutylicum # 15 950 9 987 987 570 33.0 1e-162 MTETKSAPRRTSRSKGLHVERIFSTEGVHPYDEVTWERRDVVQTNWRTGDVVFEQRGVEF PDFWSVNASTIVTNKYFRGALGTPAREDSLKTLIDRVVNTYVTTGRKNGYFASDDDAKVF GEELTWLLVHQYFSFNSPVWFNVGTTSPQQVSACFILSVDDSMESILNWYREEGFIFKGG SGAGLNISRIRSSKELLSSGGTASGPVSFMRGADASAGTIKSGGATRRAAKMVVLDIDHP DIEEFIETKAREEDKIRALRDAGFDMDLGGRDIVSVQYQNANNSVRVSDAFMAAVEQGKP FGLMSRTEPDKVLDTVDAKELFGKIAQAAWECADPGLQYDDTINAWHTTPNSGRINASNP CSEYMSLDNSSCNLASLNLLKFLDENDHFDVEKFTRAVELVITAMDISICFADFPTEAIG KTTRNFRQLGIGYANLGALLMALGLGYDSDGGRALAAAITSLMTGVSYRRSAELAAIVGP YGGYSENAEPHQAVMARHRDANRQVHPLHNNDTAVLTAAKAEWDKVVKLGHTNGFRNAQA SVLAPTGTIGFMMDCDTTGIEPDFSLVKFKKMVGGGSMQIVNQTVPRALKNLGYTPEQAE KIVAYIADNGSVVGAPDLDEAHYEVFDCAMGARFIAPMGHVRMMAAVQPFLSGAISKTVN LPESSTVENIAGVYMEGWKLGLKALAVYRDNCKVGQPLSEAKKKEEEEKAEPEVRIEYRP RRQRLPKSRMGRTTSFQVAGAGGYLTTGAYDSGRLGEIFLKLGKQGSTLAGVMDAFSIAV SIGLQYGVPLESFVQKFSNLKFEPAGMTDDPDIRISSSIIDYVFRRLALDYLDFDERAEL GIYTAAERARYVQTGSYLSDEEDELIDSETLKDTPADRVRVHEDGANQPGLFATQEAVEQ IGEAHTSAELLEEQIGREVDAPLCLTCGTKMRPSGSCYVCEGCGSTSGCS >gi|302034487|gb|GL383264.1| GENE 211 200961 - 201893 641 310 aa, chain + ## HITS:1 COG:no KEGG:PPA1027 NR:ns ## KEGG: PPA1027 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 310 1 310 310 600 100.0 1e-170 MDEPPDFAFDLDRSTAQAWDQFAERLAEVVSVIDDDGELTISTLSARTDTAPFIRFVQDD PGCSDDTAMILAEASSNNCLPESACLTSGQLDGLRSLGWQAPGTCKVHQTDNYWVYRSQD DSEQLAELTVTTLRDIFGVPHPVFLAPDQLAEILQPEPPLSPTEAASVPAIMPVDKDHLD RLVADELSHMFGHPAIRDSEGDFAIRVGTCMVFVRTTPDASELLLFAALVHDVEGRSRAV EVLNDLNVQSRYGRFALHQDRVFVTMSVMARPFVAAHLHQAVSIMSRLADGLDNELARKL RGRTTFEEGS >gi|302034487|gb|GL383264.1| GENE 212 201977 - 202831 669 284 aa, chain + ## HITS:1 COG:Cgl2878 KEGG:ns NR:ns ## COG: Cgl2878 COG0589 # Protein_GI_number: 19554128 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Corynebacterium glutamicum # 14 282 6 292 301 84 29.0 2e-16 MTDDRTSSKAQRTVIIVGVDGSEDGLRAARYAAGSAIKRDADLIVLHAVDDAAVAGAWGV VYDPTALQDAGQVVVDDAIHVATERGMDPDRISGEVVLGNPAAILADRSADAQLVVLGRR ATSGLERMFVGSTSVAVAGMSAAPVVVISRASTPDPTGGKKCVAVAVGPQSVGTAAVGFG FAEADHRGCKLLAVTVPGNDSEEVHDEALKRLNEVVKPLANKHPHVEVETRVLSGEPVDA LVDLSGNVDLLVIGMKKHPILGWTAGGVSRGIMAHAQSPLAICH >gi|302034487|gb|GL383264.1| GENE 213 203266 - 207351 2546 1361 aa, chain + ## HITS:1 COG:VC1382 KEGG:ns NR:ns ## COG: VC1382 COG1643 # Protein_GI_number: 15641394 # Func_class: L Replication, recombination and repair # Function: HrpA-like helicases # Organism: Vibrio cholerae # 22 1357 87 1306 1309 1065 45.0 0 MPNSRLEGELPGGGVVTFDTDLPIAAHADEIADLIKHHQVVVVAGETGSGKTTQLPKICL ALGRRQIAHTQPRRIAARSVAERVAEEMGVELGEQVGYQVRFTRRASSDTALTVMTDGVL LAEISHDRDLCAHDTIIIDEAHERSLNIDFLLGYLKQLLPRRPDLKVIITSATIDTARFS AHFDDAPVIEVSGRTYPVEVRYRPLDPSEQIRPDDEDDIDDEDELLHRPSAPSLTSPDDE VVDQVTGICRAVQELCREESGDILVFLAGEQEIRETAEALADLNLSNTEVLPLFARLSAA EQHRVFTPHTGRRIVLATNVAETSLTVPGIRYVIDPGTARISRYSVRTKVQCLPIEPVSQ ASANQRAGRCGRVAPGICIRLYSQTSFESRPEFTEPEILRTNLAAVILQMAQARLGAITD FPFVEAPDRSRINDGIRLLDELGALKPGHRDAPRLTKIGHQLARVPLDPRLGRMLLEGAR QGSLAEVLVIVAALSIRDVRERPADKREEADAFHRRFATEANLLQTLQAADNTDNNQVGD WSQVRRQHIHQEAANTAKPGPPARHTPHTRGKISPRPQAGGIDEGGDIMAIHRLWRYLRH QRRQMGSSAFRRMCRAEYINYLRVREWDDLHGQLRQIAKELHLEVNRTSAPTDRVLVALL SGLLSHIGLVQVRQPAKRHGQRPGPQEYLGARGTKFAINPGSLLARKSPELVVAVELVET SRLWARTVAAVQPEWVEEVAGPLIRRSWAVPHWAASTASVVATERGTLFGVPLWADRRVT YGRIDPVASRQIFIRSALVERNWRSDHGFLKHNDRVRDEAADLEERSRQRGLVADDDAIF AFYDRRIPDGIVSGSHFDAWWRRVQDRHQLDLSIDDLVDSGSVDADAFPDHWKVGNLELP VRYVFEPGSGHDGVTVTIPLALLNQVPTAPFSWQVPGLRTELATELIRALPKRIRTQLVP APDRARAALTWLEDHDADRHAPFTNELGRALRTLTGVIINPDDWNIAAIPAHLRIGFDIT DAEGRPVGKKSKKNGKDKLKGSQPAPIARSEDLDALQTDLAPKVSQSLTKAAGQPQIHGA KEWTFDPIPKRVDLSRKGPDAVGYPCLVDEGDSVGTTVLDTPRAQRTSHASGVVKLLVLN LPDPTKWVVTHMDNATKLALATSPYPSVPALLADARHKAVASVAQEKAGDLSGIRDKKTF DDLALVVRQDQADRMARVVRTAGRILSRVVAARQALATVSDPAIHADIVAQINDLVFENF ISATPDPWYDDMPRWIQGVSVRIESLMTNPSRDPRQMAELEPLLADYDALCEEQPAGKLP AEVEEIGFMLEELRVQYFAQKLGTRVSVSPKRIRMAIAKLS >gi|302034487|gb|GL383264.1| GENE 214 207515 - 208411 458 298 aa, chain + ## HITS:1 COG:BMEI0166 KEGG:ns NR:ns ## COG: BMEI0166 COG1946 # Protein_GI_number: 17986450 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA thioesterase # Organism: Brucella melitensis # 7 284 17 299 300 231 44.0 2e-60 MPSTTAELLDLLDLEDLDLDLFRGRQPHTTWQRTFGGQVLAQALVAGARTIPERTAHSMH ALFLHAGRTDLPMIFDVERIRDGRTFSTRRVNARQHGRTIFTAELSFKNREDGPEHSDPM PDCLPDPDRCPTLAQALEQMFGRPMPTVKEWDALDVRLAGDGSQLVDPNHVTHLSLWVRT TASLPDDRVVQRAILAYISDISLMAGAVMPHLGSVPSGMVVNPASLDHAMWFHRTAEADC WMLYDQVSPSASGLLGFSMGRLMQDGKLIASCCQEGVMRLVDVNDLDASVTFPLGRGT >gi|302034487|gb|GL383264.1| GENE 215 208468 - 209406 894 312 aa, chain - ## HITS:1 COG:Cgl1873 KEGG:ns NR:ns ## COG: Cgl1873 COG0568 # Protein_GI_number: 19553123 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Corynebacterium glutamicum # 1 309 16 324 331 251 46.0 9e-67 MDTKSRVRTTDGIDGKDAVGLYLDGIARTPLLNAAEEVALARRIEAGVFARAILEGHAET TSDTTTKELHQIAADGDEALAHFVRANLRLVVSVARKYGRSQMPLLDLVQEGNTGLIRAV EKFDYAKGFKFSTYATWWVRQAISRGIAQQGRIVRLPVHVAEQVNQVSAARRNLERQLGR EPETFEIADELEITEERVIELIRFGRDHVSLDAPVEDDGDTSLGDLIARETSPGPDDIVL DAEDRSRLEGLLDDLDERSADVVRRRYGLVDGRQAKLADIGKVWGITAERVRQIERAALA SMRQRNLATMAA >gi|302034487|gb|GL383264.1| GENE 216 209624 - 209848 90 74 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQGLDASWASYALGSHGAVIVDLLWAHLEGTALKDWSVLGEDTRVDHHVQHCKHRCRRGG EDSHREEEYTFHLC >gi|302034487|gb|GL383264.1| GENE 217 209754 - 211274 1605 506 aa, chain + ## HITS:1 COG:MT2777 KEGG:ns NR:ns ## COG: MT2777 COG0568 # Protein_GI_number: 15842241 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Mycobacterium tuberculosis CDC1551 # 6 506 3 528 528 434 55.0 1e-121 MSTTTSSTANTAADEEAKIATARKSTRSTSAKTGTTGRAKKTTATKASQSSAHKSAGGAK TPTAKSSGAKTTTKPTSTKTAAKSTKTAASKTTKSSGTKTVGNASSGGAKKSTTKRRTTK AKKETTVAEAASGEVDVTVERDGDDVVLTIGGKKRSLDDVDERDYDPAEAAKDEQQINKE TEAFSLSDNDDADEPEQTVMVAGATADPVKDYLKQIGKVALLNAVEEVDLAKRIEAGLFA GEQLADPDAKIREKDREDYEWIAEDGKVAKNHLLEANLRLVVSLAKRYTGRGMLFLDLIQ EGNLGLIRAVEKFDYTKGYKFSTYATWWIKQAITRAMADQARTIRIPVHMVEVINKLARV QRQMLQDLGREPTPEELASELDMTAEKVIEVQKYGREPISLHTPLGEDGDSEFGDLIEDS EAIVPADAVNFTLLQEQLHDVLDTLSEREAGVVSMRFGLTDGQPKTLDEIGKVYGVTRER IRQIESKTMSKLRHPSRSQVLRDYLD >gi|302034487|gb|GL383264.1| GENE 218 211347 - 213920 1374 857 aa, chain - ## HITS:1 COG:TM1624 KEGG:ns NR:ns ## COG: TM1624 COG3250 # Protein_GI_number: 15644372 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase/beta-glucuronidase # Organism: Thermotoga maritima # 29 704 22 651 785 294 31.0 4e-79 MSAPFQLTSSDPSVIDPVGLAADTHEWIEAVVPGGVHETLIAAGIIAHPYVEDHEKDCRW VEDRAWWYRGTVPIPAGDDPLVLTLTGVDTVADIWVNGHHVGRHANQYRPFQVTLPPIDA NKAKVLIRFAPPLDGLAEPPATRAMVNAVSDFLNAAAPQNLDAEPGSGILTLDLAATRRR KGMFSWGWDFAPRIPSIGLTGPVELTRRSPIEVSHHVDTMAIGDGDSADVNVVVSTVHHD GPAPCTVDVTLTSPDGDRVSGHAQFKHGSATVDLQLDNPQLWWTHDLGKPSLYQVDIKIC DKDANTIATDSGMAGIRTIEVDCSPDTDDPEIDGPARHFTFIINGVPVFARGANLVPQSM LPGSVTPQQDHDLVRACRDANMTMVRVWGGGVYASDAFMTACDEYGILVWHDFMFACIDY PGDDEEFMSEVRTEADYQTRRLANHPSLALWAGGNEVQAMHQAVWNNLNPGPWGSEIFDE VLPEAVRRNSPTVNYWANSPATDVDTDPRVNGTRAGDRHAWEVWHGADVGAGTHEDYSSP AEAMHYHRYSYDTGRFISEFGIHASADLPALGRWLGNDHLNLDDPILLARNKDTPKAKGM ALIDYEVGKPTSVQSYVTYSQVVQAEGLKFGIEHYRRRWPHCAGALVWQLNEPWPGMTWS LLDHDLGAKPGYYATARAFAPALSILRLTDDSLEVWVSNARPTRVTDTVTVTIEGFDGSI DQTHRVKVSVPASTSQMVWSVPRAQTPVNGSHYIWVEGSVLPANRLFLTRIGDLNLPEAH LDVKVDVTEPTTATVTVATTTFAYFVRVLTPWPGARPDISALDLRPGTKAVVTVTGLPEG FDPDEITVRHFLDDVDR >gi|302034487|gb|GL383264.1| GENE 219 214026 - 214634 443 202 aa, chain + ## HITS:1 COG:no KEGG:PPA1034 NR:ns ## KEGG: PPA1034 # Name: not_defined # Def: transcriptional regulator # Organism: P.acnes # Pathway: not_defined # 1 202 1 202 202 361 100.0 1e-98 MAVTTKSLTRRGPYAKGVARRAEILDVALRLYGASSGERPTLAAIAAEVGLTEAGVLHYF GSMDELFVAILEARDAHAVDAGGLTDPDHVWAYLAQTTRTPGLTKLFVDMSVAAADPYHP AHTFMERHRQRVHDVVRMALGIDDEQAIRLVVAAAEGLQMRWIQNQATDIAGDLEALARV LTTRSVVSKETLPKARDDLESQ >gi|302034487|gb|GL383264.1| GENE 220 214578 - 215774 777 398 aa, chain - ## HITS:1 COG:MT0230 KEGG:ns NR:ns ## COG: MT0230 COG0657 # Protein_GI_number: 15839600 # Func_class: I Lipid transport and metabolism # Function: Esterase/lipase # Organism: Mycobacterium tuberculosis CDC1551 # 148 375 135 370 403 73 26.0 7e-13 MGPSCAKILSTMSREYGGRVADTKTSRHSWLRITSGLVGLILTLPVLAWSVAAILPSHNA LTFISSVLVGSLAVPALVIAVIAFVLALLGRGGLRVVAVVFSVMALIVPVAATATTAWIT DRAGGRINVVSAAAVSSMSDHPDETVRYGSGPDETAQIYRAHNHNAPVLVDIHGGGWSTD ATMPATLRWFSDHGWLVIRPSYTLATQGHPTWNTAPKQVACAWAWSLSHVKELGGDPSQV SIMGDSAGGGMAINLAYGAASGKLKSSCGSIRAPKSVLALYPTVDVGTVESVTTLSAGNA AKMYIGGTPKQFPDRYRAVNSSTWITPQAPPTMVIQGNHDTFVPPSSVRKFVNRARQAGV RVDHVQLPMLNHAFDSQARNSLGFQVVTSLGQRFLTDH >gi|302034487|gb|GL383264.1| GENE 221 215917 - 216165 216 82 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4095 NR:ns ## KEGG: HMPREF0675_4095 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 82 1 82 82 166 100.0 2e-40 MHLDEPTPLELESLYVRSRLYGTGLGQALMNTVIGDSRAYVMVYPDNTQAKAFYRRNGFS PDGHLDDYRDEDPAYVLECWIR >gi|302034487|gb|GL383264.1| GENE 222 216305 - 217087 584 260 aa, chain + ## HITS:1 COG:no KEGG:PPA1037 NR:ns ## KEGG: PPA1037 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 260 1 260 260 512 100.0 1e-144 MSITPRKCKAAALATAPVAAALGAYGFLKGATKFYSSQVNGTPEQYKMTLPGDDLVPEGS PRFKRLTHVEDLDAPCDEVWKHVYQLNTTTAGFYSFTFFEKMFGLSVDNTFMVEQAWQAP DYYKPGDMFCWSYAGFGAEVADMVPGKYLVWFADTRDGTRTPGASFLLPPGMPWNRWSWV IALEPLDSGNRTRIYSRWNISASEESSPISVFLMDLVMMDGGGMMNRRMFQGLEKAAVGT ARKNIVPARLSAVHGQVLRH >gi|302034487|gb|GL383264.1| GENE 223 217065 - 217358 243 97 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4097 NR:ns ## KEGG: HMPREF0675_4097 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 97 1 97 97 155 100.0 6e-37 MGKSYGTDDDLQYRVPYPEIRWSRDFPRVASERASFTEDPNWPPAPGEEYHADIEGNNAR NGWTEDTPAANDAEAERRAKELAAHLDEMARGRRTAR >gi|302034487|gb|GL383264.1| GENE 224 217436 - 218710 1466 424 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4098 NR:ns ## KEGG: HMPREF0675_4098 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 424 1 424 424 853 100.0 0 MSISKDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPNYHGRRYEMGA IMGVPSYDTIQEIMDRTGDKVDGPKLRREFLHEDGEIYVPEKDPVRGPQVMAAVQKLGQL LATKYQGYDANGHYNKVHEDLMLPFDEFLALNGCEAARDLWINPFTAFGYGHFDNVPAAY VLKYLDFVTMMSFAKGDLWTWADGTQAMFEHLNATLEHPAERNVDITRITREDGKVHIHT TDWDRESDVLVLTVPLEKFLDYSDADDDEREYFSKIIHQQYMVDACLVKEYPTISGYVPD NMRPERLGHVMVYYHRWADDPHQIITTYLLRNHPDYADKTQEECRQMVLDDMETFGHPVE KIIEEQTWYYFPHVSSEDYKAGWYEKVEGMQGRRNTFYAGEIMSFGNFDEVCHYSKDLVT RFFV >gi|302034487|gb|GL383264.1| GENE 225 218831 - 219412 348 193 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4099 NR:ns ## KEGG: HMPREF0675_4099 # Name: not_defined # Def: acetyltransferase, GNAT family # Organism: P.acnes_SK137 # Pathway: not_defined # 1 193 1 193 193 380 100.0 1e-104 MDTSVNVDTSSRPAHEPATAPGRFVVRDACHEDLPEAAAVQAVCVREIGQGVIPNDVLTE VTGPGIVHTTIEQWNHFMDDGAIFKILVDRLDMRTVGVAMARVSTSSDAPTPWEIATLHV LPEARNCGASDNLLDACIGNRSAYVWVFADNARAISFYQRHGFHVDAADGAVDDSLGGVE LQRLIREDIIESQ >gi|302034487|gb|GL383264.1| GENE 226 219489 - 219719 270 76 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4100 NR:ns ## KEGG: HMPREF0675_4100 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 76 1 76 76 129 100.0 3e-29 MIQMEEVVMSTTMIEHQALTTADRCDRCGAQAYVRITLRNGGELLFCAHHARAHEDKLKQ VALHIQDDTTKLSSHV >gi|302034487|gb|GL383264.1| GENE 227 219740 - 220033 133 97 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|289427247|ref|ZP_06428963.1| ## NR: gi|289427247|ref|ZP_06428963.1| conserved hypothetical protein [Propionibacterium acnes J165] conserved hypothetical protein [Propionibacterium acnes J165] # 59 97 1 39 39 62 97.0 8e-09 MRPRVSVDPMYMAGRLRTASSPSNTNKFLAPYSRLVDAVRTVSPLPRGVSELLADEVEML SMVTVAAYRQPTTRNPGTVFAPSHPSFDTYGNIPTIA >gi|302034487|gb|GL383264.1| GENE 228 219912 - 222008 2002 698 aa, chain + ## HITS:1 COG:TM0833 KEGG:ns NR:ns ## COG: TM0833 COG0187 # Protein_GI_number: 15643596 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Thermotoga maritima # 9 691 3 631 636 496 43.0 1e-140 MRTASTSREYGAKNLLVLEGLEAVRKRPAMYIGSTDTRGLMHCLWEIFDNGVDEALAGYG RRITVTLEKAGSILVTDEGRGIPVDVEPRTGLSGLEVVYTKLHAGGKFGGGAYNVSGGLH GVGASVVNAVSVRLDVEVDRKSTVWGMSFRRGVPGVFEGEGPDAPFTPGSGVRKVGKAKR GVTGTRVRYWPDRQIFLPDAKLSWSKLADRARQTAFLVPGLEIVITDERGIQTDPETGDV LETVSETMRFDGGISEFAEYLATDQPVNNVMRLQGETSFTETVPMLDENGGMTPTDVDRD LGVDIALRWGTGYDTTVRSFVNIIATPKGGTHVQGFEQGLLRAFSAGLEGTRILKSSEEI VKDDVLEGMTAVVTVSLAEPQFEGQTKEVLGTPPVRRLVARIVEDKMTAFLTSAKAADKP VARALMEKVVNASRTRVAARAHKENQRRKNALESSHLPPKLKDCRSSDPDVTELFIVEGD SALGTANVARNSEHQALLPIRGKILNVQKADLGAMLKNAECASIIQVVGAGSGKTFDLDQ ARYGKVIFMADADSDGAHIRCLLATLFFRYMRPMVEAGRVFSAVPPLHRFELINPKRGMD KYLYTYTDAEYQRTAAQLAKKGVRFKEPQRYKGLGEMDASQLKETTMDPRHRTLRRITVD DAAEAEGTFEILMGNEVAPRKQFIVEGAYRLDAEQIDA >gi|302034487|gb|GL383264.1| GENE 229 222060 - 222584 115 174 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|315108316|gb|EFT80292.1| ## NR: gi|315108316|gb|EFT80292.1| hypothetical protein HMPREF9602_01914 [Propionibacterium acnes HL030PA2] # 37 174 1 138 138 216 99.0 5e-55 MHKIVHPARELEGSDGADDGHDNADNRPRDVLSHLRVKTSGHKDDTSRPSRESDAHPTEA RADDDKDDGHGQVEPDHRCSPLADDPPLTLHVSLRPSPDRRIRPTMPAPLFHIYLFRATT SLVMDLERTLAEHIPSLRRPAVTCHTHLTARTIVHITNPSPLGQHLDSEEHAPR >gi|302034487|gb|GL383264.1| GENE 230 222354 - 223673 1071 439 aa, chain + ## HITS:1 COG:VC2699 KEGG:ns NR:ns ## COG: VC2699 COG2704 # Protein_GI_number: 15642694 # Func_class: R General function prediction only # Function: Anaerobic C4-dicarboxylate transporter # Organism: Vibrio cholerae # 1 438 17 451 451 328 50.0 1e-89 MIWFHLAVAIIFIIIGSRLGGVGVGLAGGAGCIVLVATGLHTKVAEDIPWTVIGIIMTVI CAIAALQLAGGMDYLVHLAEVMLRKHPNQINYLAPLTTFLLSLLCGTGHTAYSVLPVIVE VAKEHKIRPSRPLSIAVVASQVAVASSPISAATLALVGVLEPLGVGYLEILAVTIPTTFI GCAVGAVVASRQGKDLIDDPIYQEREAKGLVSHNAAVADTGWRPKRTAIPSLVAFLVALV VVVGYATVSSEEVGVLTKPPMTSSAAIMLIMLTTAMIICMMSREDVKQLTTQTTFRAGMS AAICILGLAWLGNMFVNNYMDVLTHAGASILHSAPWFLSVILYLAAPLMFSHAATTVAFM PVVAKIGLSPMVMLACYPAVANYYLLPNYPTTVAAMEMDDTGSTRVGRIVLNHPFVLPGT VSIAVTVLLGAFWAPIVLG >gi|302034487|gb|GL383264.1| GENE 231 223726 - 225069 992 447 aa, chain + ## HITS:1 COG:Cgl2562 KEGG:ns NR:ns ## COG: Cgl2562 COG2270 # Protein_GI_number: 19553812 # Func_class: R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Corynebacterium glutamicum # 14 429 18 427 440 273 38.0 3e-73 MSHTDVPADQRKRVFAWAMWDPGTQPFASVITTFVFAVYLVGDAFGSKDRTVTALSWTMT LAGLTIALLAPVVGQWAGRRGRQVTALKWLTWTLAVMSGLLFFVKPHPSYLVFGLVLLGI GTVISDVGSSLYNGMLDDVAESGKVGRISGLGWGMGYLGGIIALLVIYIAWIKPKVGWFG VTNHEGMNIRVAMLFCAVWILALTLPTFCVLRDNPRPIESSEPRPHGLRALGHSYAELWR SVVRIWHVSRNTIIFLIASALFRDGLNGVFQFGGPLARQTFGFSASGVLIFGIVANLIAG ISTILLGRLDDRIGPKRLIIFSLIVLSACGMGVFIGHAGSAMVFWVLGLIMCGFVGPAQS ASRSLLTQICPPGYQGEVFGLYATTGKAVSFLAPALFGLFVTVGHAITGGDNNQYWGIMG IVLVLLAGLAATIPVSTAEIRGKTHTN >gi|302034487|gb|GL383264.1| GENE 232 225066 - 225200 67 44 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4104 NR:ns ## KEGG: HMPREF0675_4104 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 44 1 44 44 75 100.0 6e-13 MPNPLTQQTRPDWLLEESDPICSASTGSSSKYNVTTHVNRVAEG >gi|302034487|gb|GL383264.1| GENE 233 225248 - 227782 2046 844 aa, chain - ## HITS:1 COG:SPy1152 KEGG:ns NR:ns ## COG: SPy1152 COG0188 # Protein_GI_number: 15675129 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Streptococcus pyogenes M1 GAS # 13 795 5 786 828 517 38.0 1e-146 MTKKTVDDDFTENIIDVDVSREMENSFLEYAYSVIYSRALPDARDGLKPVQRRILYTMGD MGVRPDRPHVKSARVVGQVMGQLHPHGDAAIYDALVRTAQPWAMRLPLVDGHGNFGSLDA GPAAMRYTECRMAPPALTMIDGLDEDTVDFEPNYDGKETEPSVLPAAFPNLLVNGASGIA VGMATNIPPHNLVEVVAALRHMLDHPNADLDEIMRFVPGPDLPTGGRIIGLDGIADAYCT GRGSFKIRATARIEKVSPRRRGIVVTELPYMVGPERIIDQIKTLVQSKKITGIADVKDLT DLTNGTRLVIEVKNGINPEALLERLYKLTKLEDSFAINAVSLVEGQPRTLGLLEMLQVYL DHRLDVTLRRTKFQLNKAQDRLHLVEGLLLAIVDIDDVIAIIRSSEDAAAARTRLMGTFD LDEVQANYILDMQLRRLTKFSTIELESERDELRERIEGLTLIVNDKAELRRVVSGELVEV SSKYGTPRRTVLLGAAPSVAAASAPLEVPDDPCWVLLSATGLLARIDTADGLPSDGDRAT HDVIISSARTTARGDFGIITSAGRLVRVHAVELASLPITATAPSVAGGTPLADLVGLEKG ERALAVTSLSGAGPSLALGTRNGIVKRVNPELLGKESWEVIGLKNGDEVVGAVEMGDEDL ELCFVTQGAALLHFPASAVRPQGRSGGGVAGIKAKDPVIFFGAAPRRGSSVVTVAASSPA AAGKEPGSIKLTPFDQYPPKGRATGGMRCQRFLKGETALVFAWIGPDPAVACAASGVPIE LPAPNMRRDGSGDQGRQPILAVGSRRHGSNKGNPVSDGSNDALDSGDPLSTNEKQIDSQP ELFS >gi|302034487|gb|GL383264.1| GENE 234 227846 - 228940 679 364 aa, chain - ## HITS:1 COG:Cgl2204 KEGG:ns NR:ns ## COG: Cgl2204 COG4850 # Protein_GI_number: 19553454 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 25 324 24 312 344 287 47.0 3e-77 MSNRPFIGARVEDAVHKRLNTTLRRRGWVPCVIGYRSYGSATHLRVLGRVILTSPPGRNP EQKRQPDRSPLTRRNLLSIELLSQRGWRNFVGLPAPGAEVVVDVNGEKITVRADRAGYVD VRIKNHGLQPGWHEVTLSTSGDTTTAKVLVVSRNTRFGIISDIDDTVISTSLPRSLIAAW NSFVLTEQARKSIPGMARMYQKLLERHPDAPVVYVSTGAWNTYPFLVRFLARHGYPQGPL LLTDWGPTNTGWFRSGVDHKRTALRELARDFPDIEWVLVGDDGQHDIRIYSEFDELQPGH TRAIAIRELSTTQQVLAHGTTTVLEDRHRVQWTPESAPLVRAPDGDQLAPLLDKVLNHED PPQP >gi|302034487|gb|GL383264.1| GENE 235 228843 - 229583 273 246 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4106 NR:ns ## KEGG: HMPREF0675_4106 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 246 1 246 246 467 99.0 1e-130 MTHGTQPRLRSVVLRRLWTASSTRAPMNGRFDMSWRLLDQASSWDDGPVSQSADQARVPL PAALAAEIQSCGFFPELVIDLAETSLAGDEVLDHLLHLEATFDNDEVHRHLTLILRTATR MLIGHTDERAEGGQLQAITSSESIPLSHVSSVVLTRVVQHPDRFGTDPASTTVEAWLQMT WGAVSRLELEPATCGDPMCTANHGYTGTFSGDDIVIRMSPAADGADQVERLMGFATRMQA VTGAAR >gi|302034487|gb|GL383264.1| GENE 236 229580 - 230707 488 375 aa, chain + ## HITS:1 COG:TM1581 KEGG:ns NR:ns ## COG: TM1581 COG1524 # Protein_GI_number: 15644329 # Func_class: R General function prediction only # Function: Uncharacterized proteins of the AP superfamily # Organism: Thermotoga maritima # 81 369 84 376 381 83 26.0 7e-16 MSSLLAADLMPPGPGTLSDLVPAMGQALTGGGPAGLGLPDATRYVFLLVDGMGQENLEHF RHLAPTLSEMKNCHDLTCYVPSTTATSLSCIGTGAVPGCHGVVGYTFRAPSGRVMNALSW VNGDDPEVIQPHPTAFESLVAAGVTVSSIGPARFQRSGLTRASLRGPRFIPIRDEDDVDE RVYKTLKASRSGDASLTYVYERSLDHVGHGEGWQSAAWRSRLMWVDELVGALLDELDPGT ALVVTADHGMVDIPDDHRVMVEDEGGLLADVALLAGEPRFRHIYTRRPDEVAQRWRRVLG DRAQVVIGDDAVAADLFGPVDVSTRSRFGDVLAITRGDWAIMSRATPKELTLVGMHGSLT PCEMRIPLLAQICEG >gi|302034487|gb|GL383264.1| GENE 237 230710 - 231360 406 216 aa, chain + ## HITS:1 COG:PM1236 KEGG:ns NR:ns ## COG: PM1236 COG1435 # Protein_GI_number: 15603101 # Func_class: F Nucleotide transport and metabolism # Function: Thymidine kinase # Organism: Pasteurella multocida # 1 195 1 190 192 123 38.0 2e-28 MAELVFHTGPMDSGKSTLALQMDHAQSAHDRQGVRYAMHDRSGGARITSRIGLSVEAVEV TDSLDLYQDIVSRLSRGGRIDYLICDEAQFYRTKQIDQLARVVDDLDIDVYCFGILADFR TELFPGSKRLVELADRVVEPPVSPLCWCGRPATHNARIVDGKLVREGDQVGVGDIGGGSE IHYEVLCRRHHRQGITGEISRATLSEQTLPFDGSRS >gi|302034487|gb|GL383264.1| GENE 238 231418 - 232497 658 359 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4110 NR:ns ## KEGG: HMPREF0675_4110 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 359 1 359 359 532 100.0 1e-150 MDSALSPREIQSRIRSGATVEEVAVEAGVGVDQVEPFAVPVLAELDHIIEVAMTCPVRRA GAPGSHRTLGTVISRVAKANSIPEATISWRSWRHEDRTWALEARWPASTEGAPHSATFRF DLKGRHTSPEDAGARWLVNDRSPAPAEPLPEGASDPDQEPTLDLNDELAIVRAVSNRQSQ TADPEAVAGMTKHDGVYDFDTSSPADTDMLYEMLAGFQEDSVNIYEGLATPVLDAASHPE VNQDPEPATPQAPQPAGAPHAIETSQPDQAGGKSEAQPPHDDTSAQDTAASKLRTSTKKT STSTSRSQASAQAADETPQQDALVEEGSRPRKKRKPRKSKRASIPSWDEIMFGGPTPHT >gi|302034487|gb|GL383264.1| GENE 239 232706 - 233002 296 98 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4111 NR:ns ## KEGG: HMPREF0675_4111 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 98 1 98 98 163 100.0 2e-39 MATDYDAPRKTDEEVSEDSIEELKNQRNDKNSGKVDEDEVEAAETFELPGADLSHEELTV RVLPRQSGEFTCASCFLVKGRSQLAEERDGQFYCVDCV >gi|302034487|gb|GL383264.1| GENE 240 233072 - 233371 284 99 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4112 NR:ns ## KEGG: HMPREF0675_4112 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 99 1 99 99 190 100.0 2e-47 MIPEKILWKVYAGALGAVTTIVSQKVVEGVWKYVTGDEETPQPDDPEISTTKALSWALAS GIGIAGSQLLMHRFVNKRWMKFSAVNPITGKNLNAEDDD >gi|302034487|gb|GL383264.1| GENE 241 233413 - 233943 217 176 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4113 NR:ns ## KEGG: HMPREF0675_4113 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 176 2 177 177 268 100.0 8e-71 MVNFPSGSVVYSERLWAPLSWWLIGAAVALSLIVAIGAWTSLATGGIVAVIVVVVVVAAF IKAGSVRIVVTEEGFGVGRSWIEWHWVDRVRGMDAQTMNSVMRSSHQVGSFLVTRPWIRS GLVLRLADPADPHQAWIVSTRRPGKLAAIVGEYIVVPGSPSSSENLSENSMEDNHG >gi|302034487|gb|GL383264.1| GENE 242 233936 - 234394 427 152 aa, chain + ## HITS:1 COG:Cgl1859 KEGG:ns NR:ns ## COG: Cgl1859 COG0756 # Protein_GI_number: 19553109 # Func_class: F Nucleotide transport and metabolism # Function: dUTPase # Organism: Corynebacterium glutamicum # 15 146 18 149 149 140 59.0 8e-34 MADVVVPTVAVPEAMPRYAMPGDAGADLTCRHDVDLAPGERAMVETGVRVALPDGYVGFV NPRSGLAARHGLSIVNAPGTIDSGYRGQINVLLVNTDPREPVHLDAGSRIAQLVVVPVAE AIFEPVEDLDDTERGQGGYGSTGVSAMPPVDG >gi|302034487|gb|GL383264.1| GENE 243 234438 - 235172 795 244 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4115 NR:ns ## KEGG: HMPREF0675_4115 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 244 1 244 244 424 100.0 1e-117 MFGRKKRNDDVETDEVIDEDFETTEEAPDDLDAKEAPEEDESSEEEDTSAYRINLDREDG PFDIDEVDLDADDVERIDFGSLIVTPFENMQMQIQLDQTSGAVQSLLVVQGNSAIEIALF AAPASTLMIDEVHEEMVRGTEAQGGEANVGPGPMGAELRRIVPMKGPDGEDGYHVSRTWL AQGPRWLLRGVLMGESALGEKLDATGQLLLEFFCNLVVHRDDSPRVPGDVIPLRVPEGLR PEES >gi|302034487|gb|GL383264.1| GENE 244 235175 - 235567 305 130 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4116 NR:ns ## KEGG: HMPREF0675_4116 # Name: not_defined # Def: nucleic acid-binding domain protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 130 1 130 130 223 100.0 2e-57 MVRGTDARAHRESKLRRVLHRVTASNEALADDDLQRSSLDAGASTIAEAKLRTRASLQGR IEVLTLNPRGSNRWLEAELRDGTGAVTLIWMGRRRIPGLRAGRHVNVEGMITEADGHRVI YNPRYTILPD >gi|302034487|gb|GL383264.1| GENE 245 235648 - 236307 353 219 aa, chain - ## HITS:1 COG:MT2766 KEGG:ns NR:ns ## COG: MT2766 COG0569 # Protein_GI_number: 15842230 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transport systems, NAD-binding component # Organism: Mycobacterium tuberculosis CDC1551 # 13 218 13 218 220 222 55.0 4e-58 MRIVIVGAGNVGRSIARELTAHGHQILLIDKNPKAMKPDTVPEAEWLCADACELATLEEA RIDNCDIAISATGDDKVNLVHSLLAKTEFGVPRTVARVNHPGNEWMFDQVWGVDVAVSTP RLMAALVEEAVTVGELVRLFTFQKGRANLVELTLPDNSPRVGDRIRDISMPGDAVLVAII RDGQGRAPEREAALEAGDELLFMISPNYEPDLVDLLAPR >gi|302034487|gb|GL383264.1| GENE 246 236348 - 237010 466 220 aa, chain - ## HITS:1 COG:MT2765 KEGG:ns NR:ns ## COG: MT2765 COG0569 # Protein_GI_number: 15842229 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transport systems, NAD-binding component # Organism: Mycobacterium tuberculosis CDC1551 # 1 217 1 217 227 215 52.0 4e-56 MHIIIMGCGRVGSSLAILLEKRGHDVSVIDIDDNSFRRLGPDFKGRTVKGVGFDRSVLEK AGIREADGFAAVSSGDNSNVLSARVVREEFGIDNVVARIYDQGRAEVYERLGIPTVATVR WAADQVLRSLMPEGSEPAWRDPSGQVRLIRVNTHTDWVGMKISAIQERIHTPLPFLLRFG QGMVPDGATLLQDGDVVYAAVEVERITEIEGLLAKPPVKR >gi|302034487|gb|GL383264.1| GENE 247 237194 - 239218 1248 674 aa, chain + ## HITS:1 COG:MT2764 KEGG:ns NR:ns ## COG: MT2764 COG0531 # Protein_GI_number: 15842228 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Mycobacterium tuberculosis CDC1551 # 2 648 3 642 657 644 56.0 0 MKVFQAVKRVLIGRKLESSALGETLLPKRIALPVFASDALSSVAYAPDEILITLSLAGTA GFAFSWKIGIAVALVMLIVVMSYRQTVHAYPSGGGDYEVATANLSPRFGLVVASALLVDY VLTVAVSVSSGVQNAEAMIPGLAGHEGVAAAVVIAILTAMNLRGVRESGTFFAVPTYAFM ISVICMVVWGLTRIFVLGDNLRAPTADFTVVGAPKYTGLVGVAFVVLMARTFSSGCAALT GVEAISNGVPSFREPKSKNAATTLAMLGGIAVSMLMGILVLASVTGVKMFDETGESHLVD THGHAVKEQVTVVGQLARTVFYDSFKPGFYIMIVCTMIILFLAANTAFNGFPVLGSILAR DGFLPRRLHARGDRLAYSNGILTLATGAIILVLVFNASVTALIQLYVVGVFISFTVSQTG MMRHWTRLLRTDTSAGTKERRRWQHSRIINGIGLVGTGIVLIIILASKFIHGAYLALIAM AVVYVLMTSIKKHYDSVARELELNSPSDRALPSRVHAVIMISDLNKPTMRAIQFAKATVP TFLEAVIVDVDSDATERLLERWDEEDIDIPLRIIASPYREITNPLIDHIRRIRSENPRDM VEVFIPEYVVGHWWEHLLHNQTALVARARLHFMPGVLISSVPYQLRSSAILEKRWKRNDP RSWRDPGATITPRR >gi|302034487|gb|GL383264.1| GENE 248 239249 - 240430 625 393 aa, chain + ## HITS:1 COG:Rv2689c KEGG:ns NR:ns ## COG: Rv2689c COG2265 # Protein_GI_number: 15609826 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Mycobacterium tuberculosis H37Rv # 15 393 13 405 405 191 35.0 2e-48 MHESVGASQGDEFDLGMGNIAHGGYCVARLDGRVVFVRGALPGEEVRVRLTDISKASHWF GQAVDVISADSHRVVPPCPVAGECGGCDFQHVDVEFQRELKRRVVAEQLSRLAGIKWAGT VEAVTGSSDGLGWRTRMQYRSLNQRPALRRHRSHDLVQVPEGGCPIAHPAGRPAAETACN TAEHAIVMVTSCLSEDPEVSVIADGQLVAGGETMTARVGQRRWKVGAGGFWQVHPGAAEA LADAVIGSLEPQQGDEALDLYCGVGLFAGLLADRGVRVRGVEVSRQAVALARRNVPGGRF TAGRVERVLPRMAPKANIVVLDPPRKGAGKTVVQAVARTSPRAIAHVACDPAALARDLHL FDVNGYLPRSIRAFDVFPMTHHVEAVAILEPKI >gi|302034487|gb|GL383264.1| GENE 249 240825 - 243491 2266 888 aa, chain + ## HITS:1 COG:XF0290 KEGG:ns NR:ns ## COG: XF0290 COG1048 # Protein_GI_number: 15836895 # Func_class: C Energy production and conversion # Function: Aconitase A # Organism: Xylella fastidiosa 9a5c # 4 885 3 901 908 1050 57.0 0 MSVNSFNARRILDVDGQSYEIYDITKVDGSDNLPYSLKVLLENLLRTEDGANITAEQITE LGHWDADAQPSKEIQFTPARVIMQDFTGVPCIVDLATMREAVADLGGDPRKVNPLSPAEM VIDHSVIVERFGTPEAFEQNKDIEYQRNRERYQFLRWGQSAFENFRVVPPGTGIVHQVNI EHLARVTFIRDDDGTKVAYPDTCVGTDSHTTMVNGLGVVGWGVGGIEAEAAMLGQPVSML VPRVVGFKLSGELSDGVTATDLVLTITQMLREHKVVGKFVEFYGPGVAAVPLANRATLGN MSPEYGSTIAVFPIDDVTLDYLRLTGRDESQVKLVEAYAKAQGMWHDPQHEARYSEYIEL DLSTVKPSIAGPKRPQDRILISEAKESFEKTVGDYTTNPGAAVPVTLADGRSFELRNGAV TVAAITSCTNTSNPSVMIAAGLVAKKAHELGLAPKPWVKTSLAPGSQVVTDYFERAGLSE HLAAMGFDLVGYGCTTCIGNTGPLIPEVSAAINENDLAVTAVLSGNRNFEGRISPDVTMN YLASPPLVVIYSIAGTMDIDLNNDVLATTPDGREVRLVDLWPSTEEIEEIVGSSISAEMY SERYADVFDGGPRWKELDTPEGETFAWDPASTYVRKLPIFDGMKAEPEPVGDITGARVLL KLGDSVTTDHISPAGNIKSDSPAGQWLAGNGVECRDFNSYGSRRGNHEVMMRGTFANIRL RNQLASGTEGGFTRDFTKADGPVTTVYDASVNYREQGIPLVVLGGKEYGSGSSRDWAAKG TQLLGVKAVIAESYERIHRSNLIGMGVLPLQFPEGQSAASLGLTGEETFEITGVDKINEM IPEAVHVKAVNDEVVEFDAVVRIDTPGERLYYLNGGILQYVLRNMARS >gi|302034487|gb|GL383264.1| GENE 250 243792 - 245696 1264 634 aa, chain + ## HITS:1 COG:MT2756 KEGG:ns NR:ns ## COG: MT2756 COG1154 # Protein_GI_number: 15842220 # Func_class: H Coenzyme transport and metabolism; I Lipid transport and metabolism # Function: Deoxyxylulose-5-phosphate synthase # Organism: Mycobacterium tuberculosis CDC1551 # 13 629 1 623 638 625 54.0 1e-179 MTAVGPKMPRMALLDDIGCPDDVRKLTTKQAEDLAEEIRAFLIDKVSRTGGHLGPNLGVV ELTIALHRVFDSPHDPIIFDTGHQSYVHKILTGRANGFEKLRQRGGLSGYPSRAESVHDW VENSHASASLSWAEGMAKGFLSQGEDRTVVAVIGDGALTGGMAWEALNSIADQQGLRLVI VVNDNGRSYTPTVGGLANQLAIIRTDPHYEEALDRMKRHVTDKPLGKQVFGLMHAAKAGV KDALIGNGIFSDLGIKYLGPVDGHDVLSVERALELAKRYGHPVIVHVMTTKGKGFAAAEA NEEDHFHAVGRIDPVTGASLKASGGASWTQAFAGAMVELGERRPDIVGVTAAMLHPVGLA PFAARHPDRVLDVGIAEQHAVTSAAGMAAAGLHPVVALYSTFLNRAFDQLLMDAGLHHAG VTIVLDRAGITGTDGASHNGMWDMAMCGIVPGLMLSAPRDRQHLVSVLNEAVDIDDRPTV IRYSKDPIPDDIRIVTSHDGLDVLCDGPEDGILLVAHGQLCAEALAAVDQLDSPVRVVSP RWSLPVCGGLIEEAARARAVVSVEDGLVVSGLGSHLADALSQRGMWRPIRSLGIPQRYLD HDSRSAIMAELGLDSRGIADAVSQLVAQLDGEYS >gi|302034487|gb|GL383264.1| GENE 251 245712 - 246950 341 412 aa, chain - ## HITS:1 COG:Cgl1855 KEGG:ns NR:ns ## COG: Cgl1855 COG0349 # Protein_GI_number: 19553105 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonuclease D # Organism: Corynebacterium glutamicum # 7 397 5 388 403 255 39.0 1e-67 MSDLPILAEPREGVPPVVNTPDSLTHTCRALSNGHGPIAIDTERAHGFRYSPRACLIQLR RDGSGTHLVDPLALGGAVGLKPLAKALAGTQWILHAATQDMPCLAMDGLRPDDLFDTELA GRLLNLPRVSLGPMVERYCGVTLLKEHSASDWSRRPLPRDWQVYAALDVELLNDLREKIL SDLHEAGKEEWARQEFAHLVEVAADLPSEEPGIDPKRWRKLSHIGDIHSRAGLQLAHDLW LARENLAHDLDIMPGRLLCDEALVAAARHCDRTGNVDVETVLAIRGFHRGRAKKYRQTWA EAINHARSVSPTKYPPLREPSSGIPHPRSWERHHPEEAARWAAVRPAVNDVAADHDVPPE NLCTPTWLRHFAWQPPEDCSVEGVDVFLEGLGARPWQREILSGPLSAVMATL >gi|302034487|gb|GL383264.1| GENE 252 246947 - 247516 438 189 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4124 NR:ns ## KEGG: HMPREF0675_4124 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 189 1 189 189 351 100.0 1e-95 MYPVVFDELRSRILGYSWSDKLEVHEIPAPTRISPFSVAIEGSVAIREDELGSGRLILLH DPSGSEAWQGTSRFVAMIRADVDPSMASDPLVGRVAWSWLTDSLESHHAVYHAEAGTVTS VVSRPFGQLAADPESNHIELRASWTPTFSTAEDVDSHLGSWSDLCLLSCGVSPIPDDIAA ISPRRAEFA >gi|302034487|gb|GL383264.1| GENE 253 247635 - 248081 351 148 aa, chain - ## HITS:1 COG:MT2748 KEGG:ns NR:ns ## COG: MT2748 COG0229 # Protein_GI_number: 15842212 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Conserved domain frequently associated with peptide methionine sulfoxide reductase # Organism: Mycobacterium tuberculosis CDC1551 # 12 143 3 133 136 176 65.0 2e-44 MDHEHTATYDLQPHLVLTPEQWHERLSDEEYYVLREAGTEAPFVGEYTDTTTEGVYRCRA CGAELFRSTQKFHSSCGWPSFYAPLAEDRVRYLNDESLPGRPRTEVRCAQCDSHLGHVFA GEGFDTPTDLRYCINSICLDLVPTDETT >gi|302034487|gb|GL383264.1| GENE 254 248272 - 249045 490 257 aa, chain - ## HITS:1 COG:no KEGG:PPA1066 NR:ns ## KEGG: PPA1066 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 257 1 257 257 453 100.0 1e-126 MAAPVLDLVLPALSETSANLIGQRLRQRMSHLHPHIESTVSFVPAAGQYKAPRIKLSWRE LVLVPVNATHLHSNPPQVVQHAAELHRSHPDLAIKVARPTGPAPVLLNLVDARLRLAAHR VHAQELDSLVLSSPDGGDLRGAAMLSKLTRLWSQHHHLPVRIATNRGGATAVEEVVARLR QEGRRHIAVGSLWICDDENFRIHTRRALHAGAEVVAAPLGDDPVLASLAFERYCSAAMGL VPQPTDSPPHPPELHSN >gi|302034487|gb|GL383264.1| GENE 255 249309 - 250010 304 233 aa, chain - ## HITS:1 COG:RSp1517 KEGG:ns NR:ns ## COG: RSp1517 COG2964 # Protein_GI_number: 17549736 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 19 217 17 210 214 77 31.0 2e-14 MNHMSRASREAMIPALAGLVDPLKRSLIGSSEVVLHDLSKMPNSIVAISGHLTSRNIGDP ATEALLRAWREGTMQTRIGYESTSPEGRALRSSTILIEDADGPFAALCTNTDVSVWQGVH DMTAAILHGGPWPGETPAPQIPHHQDPPRDIKQVAAGLMREAIDQVGVPVSLMRKDHKLR VVDELRRRGFFLLKDSIEATANRLKVSRFTVYNYLNELEERGDADTDDSGKSA >gi|302034487|gb|GL383264.1| GENE 256 250029 - 250223 63 64 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|327453913|gb|EGF00568.1| ## NR: gi|327453913|gb|EGF00568.1| hypothetical protein HMPREF9586_01873 [Propionibacterium acnes HL083PA2] # 14 64 1 51 51 99 98.0 9e-20 MGSRGCGAVVLGCVIKFNKPLTRMMRGERIAISVEGINGNWSTSVQQVLQAHEGVCNEVH PRTV >gi|302034487|gb|GL383264.1| GENE 257 250198 - 251574 1253 458 aa, chain + ## HITS:1 COG:PM0811 KEGG:ns NR:ns ## COG: PM0811 COG3033 # Protein_GI_number: 15602676 # Func_class: E Amino acid transport and metabolism # Function: Tryptophanase # Organism: Pasteurella multocida # 3 456 4 456 458 440 48.0 1e-123 MKYIPEPFKIKMVEPIAMTSREERANILARAHYNMFGLPAESVYIDLLTDSGTGAMSDAQ WAAVMRGDEAYSGGRSYMHLMDVAGSIFGYSYIQPVHQGRAAEKVLMPLLVSRPGQLVVA NTFFDTTRAHVGLAGGRPVDNVCSEGLDSAKVAPFKGNMDVAGLEKLIAEHGDDIAAIVM TVTNNSVGGQPVSLQNMRETYEVAHKYAIPVCLDAARYAENAYFIHEREEGCQDRSLRDI VAEMFRYGDMFVMSAKKDAIVNMGGLLGVREDGELAEKVKSNVISFEGYLTYGGLAGRDL EALAVGLEEGLDMDWQRYRVGQIQYLGDQLEEAGVPFQSPVGGHAVFIDAGRMLPHLEWK QYPGHALATQLYLDAGIRSCDIGSYLMDRDPVTQEEQQAPFEFTRLAVPRRVYTQSHMDV VAEAVTKIAREPEKVPGYRITWEPPVLRHFTSRLEPIR >gi|302034487|gb|GL383264.1| GENE 258 251579 - 253033 885 484 aa, chain + ## HITS:1 COG:YPO1743 KEGG:ns NR:ns ## COG: YPO1743 COG1113 # Protein_GI_number: 16122000 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Yersinia pestis # 34 482 6 449 457 447 52.0 1e-125 MSTRLGGSSPAAGCPAVPSRFGAAGSGAPSGTEQEQGLQRGLKNRHIQFIALGGAIGTGL FYGAAESIEQAGPAIMVCYLIGGAVIFLIMRALGEMSVEHPTSGAFSYYAYRNWSPRAGF VSGYNYWFNYIAVSMAELTVVGKYVNFWFPQIPEWLSAGAFLVLITIINLTAVRAYGEFE FWFAVIKVVAILAMIVLGVLIIATGLGGGPPTGIGNLWRHGGFFPTGISGMLCGFVVVMF SFGGVELIGITAGEADDPRRSIPRAINQVVYRILIFYIGAISVMLCLFPWNQIGKAGSPF VTIFDKIGVAGAANILNVVVLTASMSAYNSGLYSNGRMLYSLAAQHNAPGIFWKTNRLGA PWVGVLASSVVTATAVLLTYLIPGKVFLYIISIALISGVINWTMIIITNLKFRRRIGPEG VAALEFRMPGNPVTSYVVLVFLALVVVIMAMMPSYRVALVVGPVWLALLWVGYDVSCLVR RRHA >gi|302034487|gb|GL383264.1| GENE 259 253429 - 254283 548 284 aa, chain + ## HITS:1 COG:DR0132 KEGG:ns NR:ns ## COG: DR0132 COG2326 # Protein_GI_number: 15805171 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Deinococcus radiodurans # 36 273 29 259 266 213 44.0 4e-55 MADNFPQLSDVLRCPQAPVDVNSINTDATPQAPGGKRETLEQFQPMAEELSELQERLFAR GRNNPDHARRVLIVLQGLDTAGKGGVVRHVVAMVDPQGINHHSFKAPTQEELRHDFLWRV KKALPEPGMLGVFDRSHYEDVLVPRVENLVEEEVWKKRYDLINDFEMNLAARGTNIIKCF LHISPGVQKERLAARLNDPAKYWKYDPGDLDTRSKWAEYIEAYNELLSRCNPDVAPWYII PSDHKWYRNWAMGRILLETMRSMKLTWPPANFDVEAEKRRLEQA >gi|302034487|gb|GL383264.1| GENE 260 254444 - 254791 89 115 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKFNLTRRNARFQGETPTSICIACETSPRVLSRRPAGTTRCESSSKARWLACGRGSVGRA SPCQGEGRGFESRRPLGEVFRTYPRGGVAERRGNGLQIRVHGFKSRLHLGRLAQW >gi|302034487|gb|GL383264.1| GENE 261 255265 - 256326 967 353 aa, chain + ## HITS:1 COG:Cgl0330 KEGG:ns NR:ns ## COG: Cgl0330 COG1064 # Protein_GI_number: 19551580 # Func_class: R General function prediction only # Function: Zn-dependent alcohol dehydrogenases # Organism: Corynebacterium glutamicum # 1 352 1 352 353 517 76.0 1e-146 MPIIVKALQKDGPDRPFKVVEIERRDPRPDDVVIDIKAAGICHSDIHTIRNEWGQAHFPL TVGHEIAGIVEAVGSEVTKYKPGDRVGVGCLVNSCGHCEQCEAGEEQACLNGPVGTYNAH DVDGSITQGGYSQKIVVNERFVCRIPDSLDFVKAAPLLCAGITTYSPIAQWNVGPGQKVA VLGLGGLGHMGVQIAAAKGADVTVLSRSLRKEKFAEKLGATRTLATSDDNFFRDHRGEFD FILNTISALIDVSAYLKLLKPRGVMACVGLPPEELGLQVGSLINGSKVLAGSNIGGIPQT QDMLDFCAEHRLGAWVEKIGVDEVDAAYDRVVAGDVRFRFVIDTATFRAVGAG >gi|302034487|gb|GL383264.1| GENE 262 256323 - 256550 82 75 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|314918314|gb|EFS82145.1| ## NR: gi|314918314|gb|EFS82145.1| hypothetical protein HMPREF9598_01291 [Propionibacterium acnes HL050PA1] # 1 75 1 75 75 136 100.0 6e-31 MSDEPMPPRIGVKLIPTGWLSSTPSSRDTLASVYDLVMRRFWPEASLDSLDCATCGSELQ GPRRYTYVRTYTRGR >gi|302034487|gb|GL383264.1| GENE 263 256547 - 257815 863 422 aa, chain + ## HITS:1 COG:Cgl1964 KEGG:ns NR:ns ## COG: Cgl1964 COG4585 # Protein_GI_number: 19553214 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Corynebacterium glutamicum # 99 405 69 369 377 144 34.0 3e-34 MRTTTLARDGLYRWRGMDAGHRGRAVAIEVGMQVGIQVLFAGLVIFTLVMALVLSPPRLG RILGWAALLIVVYTALMGTHVMSRSRREMWRPLLVTVMVVVSILLAIDFPYAAYLTIPLS FVYLDHLPPLQACVAVVVGAVAILLGVGLTGGWSVGGIVGPVAGAAVAVVVGLSLKAMQA QAAELERLNVDLLAVQKRLADSQRQAGVLEERARLAREIHDTVAQSLSSIGLLLSAVERT APDHPAIEQIRLAHLASSDALSETRGLIAELAPPTVVHQGLSAVLERLGATTWSIGGLHV DVDCPDTSDLPMEIQTALLRLCQAAMSNVVRHAHARHASIRIVRPNPGHVLLRVSDDGVG MDLDAPVRDGAFGLQAIRQRVEAASGEVSLTSKPGEGTRVEVDLPCRAASPHIDRHSQGE SS >gi|302034487|gb|GL383264.1| GENE 264 257812 - 258444 510 210 aa, chain + ## HITS:1 COG:Cgl1963 KEGG:ns NR:ns ## COG: Cgl1963 COG2197 # Protein_GI_number: 19553213 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Corynebacterium glutamicum # 3 209 2 210 210 188 50.0 6e-48 MTVRVLIADDHPVVRAGVTALLDTDPDIEIVATAATPSEALAATATVDLDLVLLDLQFSS DADAPSGVDVTRKIRSQPNAPEVLILTNYDTDADILAAVEAGATGYLLKDAPAEDLLSAI HRSARGEGALAPAVATRLMARMRSPRTSLTARELDVLEASAQGLSNAQIAEFLVVSEATV KTHLSHIYTKLGVTSRSAAVAKARDIGFIR >gi|302034487|gb|GL383264.1| GENE 265 258533 - 260587 2015 684 aa, chain + ## HITS:1 COG:ML0456 KEGG:ns NR:ns ## COG: ML0456 COG0441 # Protein_GI_number: 15827147 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Threonyl-tRNA synthetase # Organism: Mycobacterium leprae # 15 679 38 697 702 766 57.0 0 MSISITLHRSGTSRTQQVDTTTTGLDLFGSDRAVVAMRVDGNLVDLQRELHDGADVEPVE ATSEDGLNIIRHSATHVMAQAVQQLYPEVNLGIGPFITDGFYYDFGNIEPVTPEVLSELE KRMKRIVKENQRFVRRVTTEESAREELADQPYKLELIGTKGKGAEGASVEVGGGELTIYD NVRRNGEVAWKDLCRGPHVPSTKYLANTFALTKFSAAYWKGDQANDQLQRIYGTAWASRE GLAAYQQRIKEAERRDHRKLGAELDLFSFPEEIGPGLVVFHPKGAMLRHLIEEHVIARHM EAGFNFVHTPEITKGGLFHTSGHLPYYADTMFPPMLVDEERDEEGNVTRAGQEYYLKAMN CPMHNLIFRSRGRSYRELPLRFFEMGHDYRYEKSGVVHGLTRMRGFAQDDSHTYCTREQA PGEIKKQIEFFLSILADFGLNDFYLELSTRESDSAKKEKFIGSDEDWQVATDTLDQVCRS TGLQLVPDPGGAAFYGPKVSVQVRDAIGRTWQMSTIQYDFNQPERFDLEYAAADGTHQRP IMLHSAKLGSVERFIGVLTEHYAGAFPVWLSPVQVRLVPVAEAFNDYVTGFAEVLGSRGI RVETDLSSDRFGKKIRNASKDKVPFILIAGGEDAEAGAVSFRLRDGSQVNGVVLDEAVRI IAAWDSRHRNDDPTAETLRGVVDD >gi|302034487|gb|GL383264.1| GENE 266 260580 - 261140 402 186 aa, chain + ## HITS:1 COG:ML0455 KEGG:ns NR:ns ## COG: ML0455 COG0537 # Protein_GI_number: 15827146 # Func_class: F Nucleotide transport and metabolism; G Carbohydrate transport and metabolism; R General function prediction only # Function: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases # Organism: Mycobacterium leprae # 14 182 23 190 206 184 50.0 1e-46 MTEDYRLEFAEELVGVPDPFRRFWTPYRMAYISGENKPRGNRPEDGCPFCRAPQRSDEDA LIVHRGEHCYVIMNLYPYGPGHMLVCPYRHVAGYVDATQDEVVEMAELTQDAIRTLQEVS RPQGFNVGINQGASGGAGVAAHLHQHVIPRWTGDTNFLPIVAGVRAVPQLLGDGRQMLAD AWVGHA >gi|302034487|gb|GL383264.1| GENE 267 261118 - 261756 526 212 aa, chain + ## HITS:1 COG:ML0454 KEGG:ns NR:ns ## COG: ML0454 COG0558 # Protein_GI_number: 15827145 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylglycerophosphate synthase # Organism: Mycobacterium leprae # 11 206 9 199 239 106 36.0 4e-23 MRGWVMLEHFRAGWAKVMNPIADALLRAHVTPDVVTWIGTIGAVLMALICFPQGWLWQGP WLVTLFIFSDSLDGNMARKLGRHSQWGSFLDSTLDRFGDAAIFTGVALYFAGPGNSVLWT AMACAALVFGMATSYVRAKAESLALEAKVGIATRADRLLVSLVAIEITGLARVGAFPHWC VVALPIALCYLTLAGAITVVQRMVAVRRACES >gi|302034487|gb|GL383264.1| GENE 268 261802 - 262455 195 217 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 23 204 475 669 904 79 25 2e-13 MTRVDVVTRTLPPNEVSEANPWDTDRFWTVPNVLSVIRLIGVPIFLWLALGPRADGWAVA VLAVAGLTDWLDGRIARRWHQVSRIGQMLDPVADRLYIFATVIALTLRDVIPLWLVIVLI ARDVCMACLMPALRTRGFTSLPVHFVGKAATFCLLYSFPLVLLGRFGTGGWTACRVLGWA FAVWGTGLYWWAFFLYLVQTIRIVRTLPRISSRGEYS >gi|302034487|gb|GL383264.1| GENE 269 262476 - 263219 356 247 aa, chain + ## HITS:1 COG:MT1871 KEGG:ns NR:ns ## COG: MT1871 COG3879 # Protein_GI_number: 15841293 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mycobacterium tuberculosis CDC1551 # 33 235 98 295 309 80 31.0 4e-15 MDLLREVRGQALDQGYQEHHDRNPGATSRRPVGVIAVALLLVTGVLIGIAWRSTVARAPL DARERKNLVAHVQSAQAHESAQHAELAKLRASVNVMKAAEATPRNDEAGQDSAMIPMAGP GVRIILDDANAAPADELGDKDMRKLVNAVWQSGAEAVAINGHRIGPRTAIRSAGSAITVD YVSLSRPYVVEAIGSPQKLPAELADTPGGRWMTYLRDNSSITYQVTTKDRVSVPGSKASV SHASPHR >gi|302034487|gb|GL383264.1| GENE 270 263262 - 263594 450 110 aa, chain + ## HITS:1 COG:MT1872 KEGG:ns NR:ns ## COG: MT1872 COG3856 # Protein_GI_number: 15841294 # Func_class: S Function unknown # Function: Uncharacterized conserved protein (small basic protein) # Organism: Mycobacterium tuberculosis CDC1551 # 1 110 12 121 121 99 61.0 2e-21 MIALIGLVVGIIIGIVVNPTLPPGLQPYLPIMIVAALDAIFGAVRAYLAHTFSDRVFVVS FLSNVAIAALIVWVGDQIGVGSQLSTAVVVVLGIRIFTNAAAIRREVLHA >gi|302034487|gb|GL383264.1| GENE 271 263587 - 264339 558 250 aa, chain + ## HITS:1 COG:MT1873 KEGG:ns NR:ns ## COG: MT1873 COG3879 # Protein_GI_number: 15841295 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mycobacterium tuberculosis CDC1551 # 32 250 72 292 292 127 34.0 3e-29 MPDHHDRREWAENHWRKIGKDLASVSTGQILVAIILCLCSFMVVTQVRSRHDQDAYSTMS RADLVTMLDSLSDSSRQLDSEIADLRATTRDLQSGADSRKVARQEAEERLTRMKILAGTI PVHGPGIKITIDDPEDKVTSDMVLDAVEEMRDAGAEAMVLNNKVRIVADTWFAASPDGLQ VSGTTVTRPYTLTIIGQPHALKEGAKFRGGLVSQMESDKVGASVEVTTSRDLTITAVARP QPMTHATPVR >gi|302034487|gb|GL383264.1| GENE 272 264416 - 264808 249 130 aa, chain + ## HITS:1 COG:ML2077 KEGG:ns NR:ns ## COG: ML2077 COG0509 # Protein_GI_number: 15828123 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system H protein (lipoate-binding) # Organism: Mycobacterium leprae # 1 124 1 130 132 77 36.0 5e-15 MTEIPDDVLCTSDHLWIRPGNGSRVRLGVTSVLLDHFGPVESVSLPDDGEEVVSGDSCGD VEFSVRTWEIISPVAGEVVAVNPSIDADQVEADPWGDGWLFDVRLSDPEQLDELLDPDEY LASVGEVPLK >gi|302034487|gb|GL383264.1| GENE 273 264859 - 265383 414 174 aa, chain + ## HITS:1 COG:MT1875 KEGG:ns NR:ns ## COG: MT1875 COG1716 # Protein_GI_number: 15841297 # Func_class: T Signal transduction mechanisms # Function: FOG: FHA domain # Organism: Mycobacterium tuberculosis CDC1551 # 60 171 48 161 162 112 56.0 3e-25 MCGHVSEDGANFCSRCGTRLGVPIDTPGDNTGVIPTITEPTVAEETSPNVDLPAGVLQDI ADLPAENAMLIVRRGPNLGAQFLLDQDETTAGRSTHSDIFLDDITVSRHHVKFIRQDGRM VVEDQGSLNGTYVNRTLVDGSAVLRDGDEVQIGKFRMTYHTGGTASGTSGAGRV >gi|302034487|gb|GL383264.1| GENE 274 265383 - 266096 529 237 aa, chain + ## HITS:1 COG:MT1876 KEGG:ns NR:ns ## COG: MT1876 COG0789 # Protein_GI_number: 15841298 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Mycobacterium tuberculosis CDC1551 # 7 227 13 237 247 143 38.0 3e-34 MPRSVRTIGQVMKTLKPDFPDLSISKIRFLESEGLLSPERAPSGYRKYSDSDVERLRYIL TCQRDHFQPLRVIRDHLEMMDRGEEPPVSEAPPLPTENEGTPDPQPQPTGQGIVRTRGPI RMNRRELIRASGITEAMLMELERHQLVRPKRGASYFGQEALVICVAARRLAAYGMDTRHM RAIRQAAEHEAGLIEQALIPHARHPEQASKIAAETTKVMMHAHTAMVYDMLEHWSGN >gi|302034487|gb|GL383264.1| GENE 275 266127 - 266606 423 159 aa, chain + ## HITS:1 COG:MT1877 KEGG:ns NR:ns ## COG: MT1877 COG1259 # Protein_GI_number: 15841299 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mycobacterium tuberculosis CDC1551 # 4 151 4 161 164 107 41.0 7e-24 MVLLEVAEIRTKPVSGAAVLLLREADGRRHLALWIADPEKTAIADAINETEPVRPLTHDL LARAIAVLCEEEPQCIITKVEDGIWFGELVLGDMRIDARPSDLVALALRLPVPIWCTEEV ISTAGILLDAGPEDALEEFRHFLDDVSPDDFGPGPSTSG >gi|302034487|gb|GL383264.1| GENE 276 266788 - 267375 556 195 aa, chain + ## HITS:1 COG:Cgl1409 KEGG:ns NR:ns ## COG: Cgl1409 COG0789 # Protein_GI_number: 19552659 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Corynebacterium glutamicum # 22 189 18 186 191 191 56.0 8e-49 MATTGEQPSVEIPLDGHARRGQDALFEGDFAPLPEDIGFRGPVASGAAGISYRQLDYWAR TGLVRPEIRAARGSGSQRLYSFRDILMLKVVKRLLDAGVSLQQIRVAIDHLRSNGAEDLS RVTLMSDGVSVYECTNDNEVIDLLHGGQGMFAIALGGVWRDVQGSLAELPSERLNPVVDT ELDEFTARRIAKHAS >gi|302034487|gb|GL383264.1| GENE 277 267483 - 268739 869 418 aa, chain + ## HITS:1 COG:ECs4402 KEGG:ns NR:ns ## COG: ECs4402 COG1295 # Protein_GI_number: 15833656 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 4 288 41 323 337 146 30.0 6e-35 MKDTITAIMKRPSIAHLLRAHTRFNRRLGNHFAASITYFTVLAIIPVVAFAFAVLGLVLS RLSPYLLNQVVDSVVGLATESSDKQQIRAIIENAMKVGGSVWAFVVSILTALWAGIGWVG NIRKGIQAEWAPDFDMVGDDRGFMRAKLSDMLTFLGLLLVTLLTIITSQVGSSMTGMLAR WTGLDSVPGYGLLLTLAGLVATTIAGWLLFIFLYTVMTRVKTSWPPILKGSLAAGFALAL VQVGAGYLVRAFNSNKAVQAFGSIIIVMLVFDLVARLILFIASWIATANQPAIDKEWNDC DEPLLGREDCMTAEGHWEAALADRTAKQATKDDEDDKEVVPPGYTVVDGVARENSNGGDQ WRYKTEDAVSLDNAPASSGTVASSYTKPHRWPIIGASIVGAIGGMAVSAILGRRREER >gi|302034487|gb|GL383264.1| GENE 278 268762 - 269181 146 139 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSGPLTARRLQLSCPAVALVALVQGVISPHVVGSSRTQKGNCDFARVFVTESQLRLSSQS SGYVVSRSRHVHVASPVYRMVGGRHEGLGRIIGLGDDVRGPCVGDADLCRWDRPAAGGYP LDVCCGDGSYACVSSSRAG >gi|302034487|gb|GL383264.1| GENE 279 268970 - 270121 762 383 aa, chain + ## HITS:1 COG:SSO2127 KEGG:ns NR:ns ## COG: SSO2127 COG0477 # Protein_GI_number: 15898911 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Sulfolobus solfataricus # 22 344 53 382 430 77 24.0 6e-14 MFTLPPLFTAWWGAVTKASDASLGWVTTCAVLASGMLTYVAGIVRQQVGTRWMYVVATVL MLVSLAVVLVNPRSLPIAYVWALLSGASSAFTYSPSLTAVQEWFPRRLGLVTGLVNASFA LPAAAAAPIVAGMLRNWGFTATVLTLMVAVALTQMMVIFLSTPYWLEKKHAEELAVARRE ISGPAVTTAQAVRTPAFWQVWAMWFAGGGAAITMMTFAATYSAHLNDIGVQVSAVAAVTA FVSGNGLIRVVNAMLLDHIGPTVIGGVTSVTLAFGYMLLGFVASGWALIVVAFLAGVALG TIFTISPVLLTPLFGIKHFGPIFGLAFSAYGIFGAFAGPMFSSYLAQRLGYGLVFIYLAL LMFWAFLSVLAVGRSQQRMATWA >gi|302034487|gb|GL383264.1| GENE 280 270202 - 271401 1344 399 aa, chain - ## HITS:1 COG:AGc3836 KEGG:ns NR:ns ## COG: AGc3836 COG0205 # Protein_GI_number: 15889397 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphofructokinase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 398 112 509 514 483 59.0 1e-136 MAVKKVALLTAGGFAPCLSTAISGLIQRYTEVAPEVEIIAYKHGYEGLLKGDFLEVTDTV RKNAEILKRFGGSPIGNSRVKLTNAADLVKRGLVAEGDDPLKVAADRLVADGVDILHTIG GDDTNTTAADLAAYLAENNYGLTVVGLPKTIDNDVVPIRQSLGAWTAAEQGSRFAQNIVG EHNSGSRMLIVHEVMGRNCGWLTAATAAKYREWLDTQQWLPEIGLSKKAWDVHAVYVPEA HIDLEAEAARLNKVMDEVGNVTIFLSEGAGLDAIIEEMEKDGQEVPRDPFGHVKLDKVNL GAWFGKQFADKLGAEKVMVQKSGYFSRSAASNEADLELIGRCTDLAVDCALAGKTGVIGQ DEENGDTLTNIAFDRIKGGKPFDTTQPWFTAMLSEIGQA >gi|302034487|gb|GL383264.1| GENE 281 271628 - 271999 179 123 aa, chain + ## HITS:1 COG:no KEGG:PPA1091 NR:ns ## KEGG: PPA1091 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 123 60 182 182 171 100.0 1e-41 MSVLVTVLLPILLISAGVAVDGAERSRAVRVAHTVAAEAARAGCEEGSAAQLVGQDGSSA ARMAAEASARRAKADGLSQLVIDVNGDAVSVATEITRPTRLLALIGLTEVHGRASEMCTL LAR >gi|302034487|gb|GL383264.1| GENE 282 272026 - 272646 538 206 aa, chain + ## HITS:1 COG:PA3199 KEGG:ns NR:ns ## COG: PA3199 COG0009 # Protein_GI_number: 15598395 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation factor (SUA5) # Organism: Pseudomonas aeruginosa # 1 205 1 205 209 212 48.0 4e-55 MSKYFPVHPENPQQRSLNQIVDILHHGGLIAYPTDTGYAFGARLGNKDAVDRIRKLRQLS DKHHFTLVMSQFAQVGQYVQMDNWVFRAVSAAVPGRYTFILNATRDVPKVMLHPRKKTVG VRVPEHVTALALLEALNEPIVSSTLILPGQDTPMVDGWQVQDEIGDQLDAVLDSGDCGVE PTTVVDFTSGEAVVTRRGAGDPSLFE >gi|302034487|gb|GL383264.1| GENE 283 272706 - 273395 485 229 aa, chain + ## HITS:1 COG:DR1451 KEGG:ns NR:ns ## COG: DR1451 COG0775 # Protein_GI_number: 15806467 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside phosphorylase # Organism: Deinococcus radiodurans # 1 221 9 227 238 148 44.0 8e-36 MGAMEDEVRLIRADLDDVEELDGPCELLRGRLDGTPVVLAKCGIGKVNAALAASAMVQAG ATRIVFTGVAGAVAPGLGIGDVVVGNRFQQHDADDTAFGNPIGTVPGEPPYWEPDPVLFA LVLDVLRALEEPRGHQVVAGPIVSGDQFIAQAEKVAWLRATFGASAVEMEGAALAQAANR LGVPFAVVRILSDSADGDAVADFPAFLNNAAHRGRDLAHALARQHRLTA >gi|302034487|gb|GL383264.1| GENE 284 273404 - 274333 546 309 aa, chain - ## HITS:1 COG:BH1953 KEGG:ns NR:ns ## COG: BH1953 COG1597 # Protein_GI_number: 15614516 # Func_class: I Lipid transport and metabolism; R General function prediction only # Function: Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase # Organism: Bacillus halodurans # 51 307 38 294 295 85 26.0 1e-16 MPYASGVQTFQPRKVAVVHNSVKTQNNPHWHDLIEKKCREHCGVTPVFFPTTADDHGQGL ACKAVDEGAEMVLALGGDGTVRQVSAGLANTGVPMGILGMGTGNLLARNLELPHTDLAAS LDAALTRPVRAIDLGYVRFDESEEICFTVIIGMGMDAQTMAGTRDRLKDKVGWLAYVASG ALTLVQPGFQVRASVDGRRPVITRARTMLVCNCSVLPGGVVLVADGRIDDGALDVLTLSP HGIVGWIAVLNHFVTRHRHGHRLVRHATSRTALVMSGSGPILAEVDGDPIGTVTTMRTRV APGALLVRA >gi|302034487|gb|GL383264.1| GENE 285 274360 - 274932 256 190 aa, chain - ## HITS:1 COG:BH3630 KEGG:ns NR:ns ## COG: BH3630 COG1739 # Protein_GI_number: 15616192 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus halodurans # 2 159 29 180 213 110 38.0 1e-24 MRVTCEDEAREVIAQARHDGHNARHHVSAFVLGADRGVQRCNDDGEPAGTAGMPTLAALT AADPKGNPDLSDVVAVTSRWFGGIKLGTGGLTRAYGNAVSNALTVAAFHRRVMMDTFTTT IGLRRAGHEEGVIRAAGHDVTNVEYTAKGSIVTLACRADRGSQMAIDLAKLLGREVRLTP ARQCWVDIEA >gi|302034487|gb|GL383264.1| GENE 286 275007 - 276761 1056 584 aa, chain - ## HITS:1 COG:BS_yvaC KEGG:ns NR:ns ## COG: BS_yvaC COG1289 # Protein_GI_number: 16080408 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Bacillus subtilis # 271 443 315 487 631 63 31.0 9e-10 MSKPNQPSKPRQLIRKLITIHSAPGRSRQAVISVIPIAVSLVTMGLIVSPTHAAMGMIGA MGALAGNNNAPLSRARILFGVGTATIFSQCLGLMSVQIEWLLPIILASWSLIVIWVWHAL QLGPPGPLNILFAAAFGTYMASRGWTVSTVFTSTVPSFLIAAIVSMIIILASPHRPVRAA VKKAENAVNAYCEPDDDADSHEVARLRSAAHAAIHLAWWAYNDGHSSGVDNPSEMSELSD LRARLITAHMRLEHELRLEAFPSADVSLPDHVDWTPLGRPKASYLLRTALERGSRPTMVA LRAATGVFFASLLMILLPFGHPYWAVLSVLIMIHMDATRSDMTIRAIHRVLGTVVGLGLY LAIAAFGPSGWVKIGLIIVFLWTMQALVTRNYGLACIFITCFALFMTPLTKPGQMYQLAQ DRIVETIVGLTIGIVTIHIVGRRAPVLLVRSQYRRTLRSMMPVLRSLSQGRTKTPQAQIE RNQMVHELIQGSALLSATRPDAPQALQDWSKVDRTVTETGYDLLSVCWHTGNGPVPWARR LLADIAIFITGLPPISSQNLDAHSVAEEMEKIRMDMVTSLPGVK >gi|302034487|gb|GL383264.1| GENE 287 276963 - 277574 389 203 aa, chain - ## HITS:1 COG:Cgl2327 KEGG:ns NR:ns ## COG: Cgl2327 COG0443 # Protein_GI_number: 19553577 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Corynebacterium glutamicum # 16 193 251 426 484 139 44.0 3e-33 MDLGVDLGTTYSAVAAMEFTLRRERNLLVDLDSTILHIPMAEVARACKPLIDRTIETMEP LSSLLNGANSDIAGIHLVGGTTSLPIVPRRLRELCGRKVHRSPHPTPATAIGLAVAADAG TLGIGDRLSRGFGVFRETESGGGIEFDVLTDQTTRIAGTTIITRKYRCRHNIGVFRFVEF SRTDAIGEPVGDLIPPRYRRFPP >gi|302034487|gb|GL383264.1| GENE 288 277610 - 278626 639 338 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4161 NR:ns ## KEGG: HMPREF0675_4161 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 338 1 338 338 616 100.0 1e-175 MDRQSNRFSWHPGIVGPDQEVSALITLVQSFSDTGLVQARVRDAILSQLPHHELGEFDID LLLDHRDSRQPIIFDTDHFEGYERPRLVLHEVTDQLGQAFLVLEGPEPALGWESLVSSLT SLVDSMGIRLTVITDSIPIPTPHTRPAIVTRWASRPELILGSTSPFGRLQVPASFPVVLG QRLGETNHAVIGLASHVPHYLADLDYPESARALVEALRGATGLALPINSLAVAANTVRAE IDTQVNNSEELKAMLHALEEQYDSRVAQRELGTTQVAVPDAEDIGAEVEDFLRSIDEDDG PSNDDPDTQGSGPRRSSDDTSDDDKPDYHPRRGGDLDN >gi|302034487|gb|GL383264.1| GENE 289 278747 - 279517 448 256 aa, chain + ## HITS:1 COG:Cgl1611 KEGG:ns NR:ns ## COG: Cgl1611 COG0652 # Protein_GI_number: 19552861 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family # Organism: Corynebacterium glutamicum # 63 236 79 258 280 105 36.0 7e-23 MTRRATTAVAVAGLSLLAGCSQTNGTVPGVSDSPDAWWTSLPSATSGSANSRAATHAAGT ASATTTPAPAAASGPCGYAVAGKAARPVDMPPSDNIEKTGSTTVTLTINDAPVVLTVDRA IAPCAANAFISLAEQGYYNDTSCHKLSTGDAKYLQCGDPSGTGNGGSGYSYPVEKEAKAG GSVGSGTLALVADSQHRLGSQFALVYGDSKLSDSFLVIGSIDKDGAGSISDIAHKGLADD GLTPKVDTKIGSVVMG >gi|302034487|gb|GL383264.1| GENE 290 279521 - 280339 542 272 aa, chain - ## HITS:1 COG:ECs0717 KEGG:ns NR:ns ## COG: ECs0717 COG0596 # Protein_GI_number: 15829971 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Escherichia coli O157:H7 # 20 263 23 253 254 116 31.0 4e-26 MNKLHLTTLGNGQQDVYWCHGVFGQGKNFTRVAKDLLATDPDAYRCILVDLPNHGRSPWT QTFSYRDMADSLAATVKATSGNRPAHLLGHSMGGKVVMRTVLDNPDLARSLTVVDMAPVD SRLTRLAPLVDAMKSVNLTALTTRRQAEEHMSDGVPDPNIRQFLLQNLRHETGNHERWYW QMNLDLLGNGLSDIGSWPPVTSIWEGPALWITAEQSDYVGPDHSQAMHELFPQVRRIRIK NSGHWVHSDQPGVFVQVLAAFLSRCQGPLTPR >gi|302034487|gb|GL383264.1| GENE 291 280432 - 280683 146 83 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|314955732|gb|EFT00134.1| ## NR: gi|314955732|gb|EFT00134.1| hypothetical protein HMPREF9609_01308 [Propionibacterium acnes HL027PA1] hypothetical protein HMPREF9581_02037 [Propionibacterium acnes HL087PA3] # 1 83 24 106 106 154 100.0 3e-36 MWGSWLDWMQTPRTGINLERSAGGHRAHDVLTISLVLRARVTSGIEGSGRALPFARTMMT THGSHCAPRGGRENNAERRTLCQ >gi|302034487|gb|GL383264.1| GENE 292 280716 - 281423 606 235 aa, chain + ## HITS:1 COG:MT1363 KEGG:ns NR:ns ## COG: MT1363 COG1637 # Protein_GI_number: 15840774 # Func_class: L Replication, recombination and repair # Function: Predicted nuclease of the RecB family # Organism: Mycobacterium tuberculosis CDC1551 # 1 235 4 226 226 290 65.0 1e-78 MRLVIAQCQVDYTGRLTAHLPWAKRLIVVKSDNSVSVHADDRAYKPLNWMSSPCTLTIRP CLPDEPAATAAVDAEEVWEVDAPTGDHLQILLGPKVLDVTEELGIDPGLQKDGVEAHLQE LLAENPNTFGDGWSLVRREYMTPIGPVDLLCRDADGVYVAVEVKRRGEMDGVEQLTRYLE LLNRDHLLGDRVRGVFAAQKIKPQARTLAVDRGIECVTIDYDALRGMDHPEDRLF >gi|302034487|gb|GL383264.1| GENE 293 281486 - 282823 1372 445 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4165 NR:ns ## KEGG: HMPREF0675_4165 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 445 1 445 445 525 100.0 1e-147 MSTKDVSDGQFDEETGLNLFDDTASAAGSFTHSMWGYDRTSVDNYVREIEQQVSTLKQLT RHLRGQVSQAQAEATQSDFKRLGVHATEILTAAEAQAKDIVAMAGREAERIKEEGRRVAA DMRAAAQTESDDIRVAGLANQRELRDQAAKDSRTAIEQARLQARTIVEQAGTHAEAIVTE ARTKAATIDQNTRAQVAQILDQARSEAATITTKARQEAENITNEARTSHDEATAKIKQLL EQATVHQQASSDNVTKRTQEADAIRQSALEEAETTRNQAARDAENRIATAHRQAAMMKER LEEQYAWRKEQLERETAALLQRKKAVIAQLNNLKALAGEAESDYPDTDPFAEEAEGATAD DATIVISPKSSQAQQKPAASQNTQADQSMADDKETAPLNDPASQRTQVIPAVKDGESAQP SGATAADEADNEKTQVLPQGIRPGK >gi|302034487|gb|GL383264.1| GENE 294 282957 - 283415 565 152 aa, chain - ## HITS:1 COG:Cgl1189 KEGG:ns NR:ns ## COG: Cgl1189 COG0346 # Protein_GI_number: 19552439 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Corynebacterium glutamicum # 3 143 8 149 151 120 42.0 1e-27 MENFNNDPFACIDHVGFAVKDMDEAIKYHCDVLGFRVLFREKNEGHGVEEAMLGTGKRGE ESTVVQLLAPLSEDSTIGKYISKNKNMIQQVCYRTYNLDKTIATLKERGAVFTGEPSIGT AGSRVIFLHPKYTGGLLIEITEPPAGGMPYKD >gi|302034487|gb|GL383264.1| GENE 295 283278 - 283571 147 97 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSLVLLTEEHPEAQHVAVVLDGLVHVLDGKTDVINTRKRIVVEVLHGPIVALSTRVQPGG VGIPGALCTGVLQAMERCGLCAQWFAQLAAGQIMPTR >gi|302034487|gb|GL383264.1| GENE 296 284061 - 285692 1618 543 aa, chain - ## HITS:1 COG:Cgl2489 KEGG:ns NR:ns ## COG: Cgl2489 COG0033 # Protein_GI_number: 19553739 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglucomutase # Organism: Corynebacterium glutamicum # 1 541 1 552 554 699 66.0 0 MAHERAGKPAQESDLIDVDAVLSAYHDISPDPSNPDQMVVFGTSGHRGSSLDGAFNDAHI AATTQAIVEYRTCQGIDGPLFIGKDTHALSMPAWTTAIEVLCANDVEVIAEHDDEWTPTP AVSRAIIVHNRLSEGRQADGIVVTPSHNPPRDGGFKYNPPHGGPADTDATGWIADRANEL LADPSGIRRKPYEQVRNEVSRYDYRSAYCDDLRNAIDLDAIDEAGVHIGADPLGGASVQY WEYIADHLGIDLTVVNPTVDPTWRFMTLDSDGKIRMDCSSPSAMASLIANKDAYDIATGN DADSDRHGIVTPDAGLMNPNAYLAVAIGYLFAHRPGWRPDAGIGKTLVSSSLIDKVAADP GRRLIEVPVGFKWFVPGLMRGDIGFGGEESAGASFLDLDGQTWTTDKDGILLALLASEIK AVTGRSPSEHYADLEDRFGKSYYARIDADANREQKARLKALSPDDVSANTIAGEKIEKIL TKAPGNGAAIGGIKVMTENAWFAARPSGTEDKYKIYAESLRDADHLAAVQEEARHIVDQA LKG >gi|302034487|gb|GL383264.1| GENE 297 285816 - 286757 728 313 aa, chain + ## HITS:1 COG:ML1159 KEGG:ns NR:ns ## COG: ML1159 COG3118 # Protein_GI_number: 15827586 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Thioredoxin domain-containing protein # Organism: Mycobacterium leprae # 14 313 4 301 301 112 32.0 1e-24 MDDMSSDSIHRHDAVDLSGLAAAASSADSPVGPAAHVGSATARTWVVEGTEENFNSLLQK SVQHPVLVEFTTPQAHGAKEMESLLRRVTDEAAGKWLLVRVDIDAQPRLAQSLGVKAVPM LVAVIGGQLAPLAQGTIDEQQFRQLTEQVIQAATSAGMVGRAEPVMVEVSSEEPVGPDPR TVEAEKLMDAGKFDEAVAAYDALLASEPNDPVLIAGRNGAALLGRLDGKDPAALLTAAQQ RPDDVDAQLAAADVELMGGRPADAFNRIIQVVRSTHDEERETARTRLLDLFEMVGQSAPE VAAARRSLAAVLF >gi|302034487|gb|GL383264.1| GENE 298 286815 - 287045 90 76 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|315092794|gb|EFT64770.1| ## NR: gi|315092794|gb|EFT64770.1| hypothetical protein HMPREF9582_01219 [Propionibacterium acnes HL060PA1] # 36 75 6 45 46 69 87.0 9e-11 MNERGGSQNAIEVEQHSMELLIEGGRVHNPHAIHHVGKGHLDSISRRLLAISPASNGGHD SASLWAEIRGFLKRVI >gi|302034487|gb|GL383264.1| GENE 299 286962 - 287696 649 244 aa, chain + ## HITS:1 COG:ML0393 KEGG:ns NR:ns ## COG: ML0393 COG0637 # Protein_GI_number: 15827118 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Mycobacterium leprae # 6 240 18 261 261 205 49.0 6e-53 MDSPSLDEKFHAVLFDLDGVLTPTALIHMRAWQEMFNEELSRHQDQNPYTDEDYFAYVDG KPRYNGVRDFFASRGITLPEGDPSDGPAAQTICGLGNRKNDLFNTVLARDGIQPYPGSRR WVDRLHESGMAMAVVSSSRNAAAVLKAAGMVEDFSVLVDGNRSKTERLPGKPAPDTYLRG AELLGVPAEQCVVVEDAVSGVRAGAAGGFGMVLGVNRGVGADRLREAGADRVVDDLDEMV EEMA >gi|302034487|gb|GL383264.1| GENE 300 287717 - 290200 1695 827 aa, chain + ## HITS:1 COG:MT3509 KEGG:ns NR:ns ## COG: MT3509 COG1554 # Protein_GI_number: 15842995 # Func_class: G Carbohydrate transport and metabolism # Function: Trehalose and maltose hydrolases (possible phosphorylases) # Organism: Mycobacterium tuberculosis CDC1551 # 6 765 7 742 786 501 39.0 1e-141 MDRWRFPDDPWAIVETAPSTDDLGTTETLFSIGNGYLGMRGNPSEGRDSFSHGTYINGFH EIWDIHHAENAYGFARTGQTIVNVPDAKLMKLYVDDEPLLLSINEIQSYKRWIDFREGVL RRELVWRTPAGKLLRVATSRMVSFTHRHMALISIEVTMLEGDAPIVISSQILNRQDGMDE YHARPDDIEKTADPRQARKFADKVLIPEKDWHSDRRMILGFRTARSGMTLAVGADHEIIT ENEYAALIDTEPGMGKRVYRVEATQGRPIRIDKAVAYHTSRGVPVHELFDRVRRSLDRVR EQGHNVYYDEQRAWLDDYWATADVEVEGAPTGIQQAVRWNLFQIAQASARADQLGIPVKG VTGSGYEGHYFWDTEVYVIPMLTYTHPRIAENALRFRVNTLPQARRRAKELSERGALFPW RTITGEEASAYYAAGTAQYHINADIVHAIMNHARATEDKTFLFRDAAPVLVETARMWADL GFWRINGGREFHIHGVTGPDEYTTVVNNNLYTNVMARANLIDAAGVIRRMRDEDPLWYEH LCSELDLTEDEVGGWEECAAGMVIPFDDTFGIHPQDDQFLSRELWDLKNTPDNKRPLLLH YHPLVIYRFQVLKQADVVLALFLQGDQFTQAVKLADFEYYDPITTGDSSLSAVVQSVMAA EVGHQEMAMGYFLDALFCDLADTHHNASDGVHVASTGGVWGCLVHGFVGMRNDRENLRFD PRLPAQWTSIKHHMLIGDSHMLVFLERDAITFQILSGHDRDVTVRGELYHIGVEPVRVPL SDQGPLRPSLRVTHPISGLRRADGSLITAEVPGSIAETIVSSPISTS >gi|302034487|gb|GL383264.1| GENE 301 290300 - 292345 2047 681 aa, chain - ## HITS:1 COG:Cgl1324_2 KEGG:ns NR:ns ## COG: Cgl1324_2 COG1263 # Protein_GI_number: 19552574 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Corynebacterium glutamicum # 117 505 1 375 415 357 50.0 5e-98 MSSPASQIVDAVGGPDNIVGLTHCATRLRFQLRDSSPIDKAEVEAIPSVMGAVPQSGNRY QIVIGGAVAGVYNDIMDLPAMKGLSSSSGNQSDADVKAEHRSKGPRGKFSWLDNLFEYLS DSFRPIMGALLGASLFITFMALMGSLGVIGNWADSRVTLPPSWQFVNLAWQCVFYFLPLL VAYNATKRLNADPWVGFSVMAVVMLPAFTELGKTAHPLTLGGFKVNVVDVFGLPLTIFNY GSQVFPPLIMAAILAPLYKWLKKIISPNVQMIFVPFLTMLIMIPLTAFLIGPIGVYAGAG LANGLKAVNDVSPFIFAVLIPLLYPFMVPLGLHWPLNAVMLLNIQTLGYDYIQGPMGAWN FACFGATAGVLFLSVRDKDVTMRQTAIGALAAGLLGGISEPSLYGIHLRYKKIYPSMLVG CLVGGVIIGAGGGLHTPAFVFTSLLTIPAFDKIGLYSVAIAASFFTAMALVIVRDYRDND EKAAAKARRRQASAHEAEPTAAAPAAATESITETATVEGAEAPTAAEVAAEAVTVTSPLE GRAVPISEIPDPVFSTGVVGDGIAIEPTSNTVVCPADATVVTAPDSGHAFGLKLDSGVEL LIHVGIDTVELGGKGFDVKVKAGDHVSAGQPLVVFDPTVIDEAGYSKITPVLVTNGFDYS NVTGIPADDVTTGTPVITVVK >gi|302034487|gb|GL383264.1| GENE 302 292615 - 293409 422 264 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227379795|ref|ZP_03863252.1| acetyltransferase, ribosomal protein N-acetylase [Kribbella flavida DSM 17836] # 37 252 110 325 338 167 44 1e-39 MVDDESGSEDFRIQVEVVDDSGRLLLDDPPYPEGLTRAISLASDDAIIGHDVRRLEARVA VDDDEVIHALHHAGYRREGRLRQARVRENGWIDEYIYSRLATDEIYTRTGHTGMLDSVLP TKRVISHVLLRDDAGRVLMCETTYKPDWELPGGVVEPIESPHAGAVRECREELGTPLDIP GTPSLIDWMPPALGWSDAIEFIYDAGVAEPSLVKVMHPADSEISRLHWVEPQLIPDHVTA LSARRIEAILSDCMPRATENGFPV >gi|302034487|gb|GL383264.1| GENE 303 293433 - 295367 1746 644 aa, chain - ## HITS:1 COG:Rv1326c KEGG:ns NR:ns ## COG: Rv1326c COG0296 # Protein_GI_number: 15608466 # Func_class: G Carbohydrate transport and metabolism # Function: 1,4-alpha-glucan branching enzyme # Organism: Mycobacterium tuberculosis H37Rv # 13 627 114 728 731 671 54.0 0 MAHDEFGGLTGWDLEGFHSGGDTEVWKRLGSHVVTIDDDERGPITGTRFAVWAPNAQAVE VISDFNWWTGDRMRLIPGSGVWGTFVEGVDEGTLYKFRIQDQWGTWHEKVDPMARYSEQA PQNASIVNETHYEWNDDEWIARREASRAHAEPMSVYEVHLGGWRHGLSYRELADQLVSYV TWQGYTHVEFMPLAEHPFAPSWGYQVTGYFSPTSRYGSPDDLRYLIDKLHQAGIGVIMDW VPGHFPKDDWALGRFDGTALYEHADPRQGEHKDWGTYIFNYGRNEVKSFLVSSALYWISE FHADGLRVDAVASMLYLDYSREEGQWVPNKYGGRENLEAIDFLRYVNSHLYSRHPGILMI AEESTSFPGVTKPVDDGGLGFGFKWNMGWMNDSLRYLELNPFHRQYHHGEMTFAMVYQYS ENFILPISHDEVVHGKGSMITKIPGDDWQQFASLRAFYSYMWSFPGKQLVFMGQEFGQRH EFDESVSLEWFVADLWGHGGLKRLFRDLNKIYKENPALWQLDSDPRGFEWINADDAGNNL FSWLRRSDDGSTIACFTNFSPNPQTDYRIDLPMEGVWTEILNTDSLEYDGTGEFGNLGQI VAAPLPAPDRLRAVATVCVPPMGSVWLRHNPSATAALPGDPGVQ >gi|302034487|gb|GL383264.1| GENE 304 295446 - 296744 658 432 aa, chain - ## HITS:1 COG:Cgl2251 KEGG:ns NR:ns ## COG: Cgl2251 COG3281 # Protein_GI_number: 19553501 # Func_class: G Carbohydrate transport and metabolism # Function: Uncharacterized protein, probably involved in trehalose biosynthesis # Organism: Corynebacterium glutamicum # 132 429 79 361 363 180 37.0 5e-45 MTVWDDATVRERVWDHISGARWFSGKGRCGSLTRLLPLAPVVNEQDLQVLPVIAHVGYPQ AADEYYQLLLALRPGRVAGLAEIVVNGQPFTVTDATEDELALTAWARILLEGTPIAMDGS WQLHRRRAAPEPVRFVKRFGGEQSNTSFMVGDAIIIKMFRRLEPGDNLDITVHNALNDAG ISSVATLYGFMSGQIPAEEHIPVDLAMIIERLPQPRDGWELITAKAVDLVDVTDLVAGLG QCLRTIHEALRHTFSTVEIDGSRVADDMVRRLDAAVVTAPALARYRGTLTARFEKLRGRH LAAQRIHGDFHLGQTLLTPGGWRIIDFEGEPLKPLAERRLPDSRWSDVAGMMRSLSYATS AHARPTAPQTLTWARRASEAFLTGYGWPNTAEQDLLAAYEADKASYEIVYETLNRPTWVD IPLSAIRAMGQD >gi|302034487|gb|GL383264.1| GENE 305 296741 - 298513 1224 590 aa, chain - ## HITS:1 COG:MT0134 KEGG:ns NR:ns ## COG: MT0134 COG0366 # Protein_GI_number: 15839507 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Mycobacterium tuberculosis CDC1551 # 49 588 43 588 601 678 60.0 0 MTHVPCTPAAEIPETLAPTGALGLTSAQLQARLDEIHPVGSIDRTETEWFRTAVFYEVLV RSFKDSNGDGIGDFKGLTGKLDYLQWLGVDCLWLPPFYDSPLHDGGYDIRDYRWIREELG TIEDFKVFLDAAHDRGLRVIIDFVMNHTSDSHPWFQSSRADPDGPYGNYYVWSDTDEAYS DARIIFCDTEDSNWSWDSQRKQFYWHRFFHHQPDLNFEEPRVMEEMLDAVRFWMDLGIDG FRLDAVPYLIEAEGTNCENLPGTHKILKQLRAMVDEEYPGRILLCEANQWPDDVVEYFGN GDECQMAFHFPVMPRLYMGLRRGSRECISEILAHTPHIPDGCQWGTFLRNHDELTLEMVT EEDRHYMWEEYAPESRWRCNLGIRRRLSPLVDNDDAKIRLLNAMLLSLPGSPVLYYGDEI GMGDDPWLPDRDGVRTPMQWDDSETAGFSTALPEDFHLPLIRTFGHDPEHVNVARQMDDP SSLLVWTRAMLGIRRHHPVFGTGEFTDLGGPDMAVMSFLRHNEHETVLCLANFSDTERMV ALHLPQFAGVTGSSLIHGQDAQPVKADGTLSVPLWPYGYRWLQMSREERS >gi|302034487|gb|GL383264.1| GENE 306 298510 - 300636 1512 708 aa, chain - ## HITS:1 COG:Cgl1197 KEGG:ns NR:ns ## COG: Cgl1197 COG0366 # Protein_GI_number: 19552447 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Corynebacterium glutamicum # 60 701 3 652 675 549 47.0 1e-156 MAPASPADSPKSAPAPEPSPVPPEFPAPRRAAEHAFGNNALFTATSAIDSPGYPPLRGFG RIPVHNVRPEVESGHLPIYSVVNEEFEVTANVFREGHDAVGASVVLTDPEGNRHLTDMHQ VEPWGLDIWKARVSADIEGDWAMHVEGWSDTWGTWHHNANAKLAAAIDVELVCAEGHALI NEAVRHAEQSGDTDAITALRETDANLTLDRAPDSLQQVINTYAFCEAMRVHAPRLLTSPT LPAPLRVERRRALYGSWYEFFPRSQGAYVDADGHWVSGTFDTSWERLDAAAAMGFDVVYL PPIHPIGTAFRKGKDNTLTPGPDDPGSPWAIGSSDGGHDTIHPDLGTFDDLDRFVAHAHD LGMEVALDFALQASPDHPWVHQHPEWFTTRVDGTIAYAENPPKKYQDIYPINFDNDPDGI YQECLRLLELWISHGVTIFRVDNPHTKPLNFWAWLMEQVHRRHPEVIFLAEAFTRPEMMA ALGKVGFQQGYSYFTWRTTKWELEAYLDEVSHQTSHFYRPNFFVNTPDINPIYLNDGNPA GFAIRAILAATMSPSWGMYSGFEICEHEPLPGREEYAHSEKYEYRPRDYDSEPNITLLVT RLNEIRRAHPALQQLRDTTIHHAPHDNVFVFSKKAGNDVVIVVTSLDPVWGVESQIMLDM AALGFDNDDTFTVHDELTGADFTWGQQAFVRLYPAQPAHILHVRKTTS >gi|302034487|gb|GL383264.1| GENE 307 300888 - 303008 1283 706 aa, chain - ## HITS:1 COG:Cgl2054 KEGG:ns NR:ns ## COG: Cgl2054 COG1523 # Protein_GI_number: 19553304 # Func_class: G Carbohydrate transport and metabolism # Function: Type II secretory pathway, pullulanase PulA and related glycosidases # Organism: Corynebacterium glutamicum # 8 688 13 712 836 596 44.0 1e-170 MTDTNTAPFDTSALGSTLIDGGCRFGLWAPRAERVELALVADDGSQVNHDMTRDEHGVWT VEVSDVQAGQRYGYRVHGPWDPDRGMRFNPAKLLLDPYARAITAGVDYHGPIMDHTPESN YEPDLTDDATSVPLAVVIDDPGPPTPIARRHDISESVIYETHVKGYTRLHPLVPEHLRGT YAGLAYPAVIEHLKSIGVTAIELLPVQQFVSEPFIVGRGLSNYWGYNTLGFFAPHAAYCS VGSMGTQVREFKDMVTSFHEAGIEVFLDVVYNHTGEGGHEGPTLSFRGIDHESYYRLTND HRNDYDVTGCGNSVDTSHPEVLAMVLDSLRYWVTEMGVDGFRYDLATTLIRDKSHGVDQN HLFKQALVEDPILNKVKHIAEPWDLGPYGYQVGAWGPHWSEWNDRFRNYVRDFWRGAVRG VEELATRLCGSPDLYGQPTSSVNFITAHDGFTMRDLVTYNMKHNQGNGEDNHDGSNDNRA WNCGWEGETTDQSIVMLRHRQVRNLVATLLLATGVPMITAGDEMGRTQQGNNNAYCQDSP ISWIDWEDAEAWSDVTDLVKIITALRREHPALRPSRYRHHDPVGDANDSYPRRADLAWFS GHGGEMVNNDWHDESRRTLGMYTSDDNEAFLIWFHAGDRPIEIILPSVRWGESWHVVAST ALPGEIPDEAVPAGLSVTLPSRCVVVMQASPFGLTAPLRAKRTLGG >gi|302034487|gb|GL383264.1| GENE 308 303165 - 304304 572 379 aa, chain + ## HITS:1 COG:alr3088 KEGG:ns NR:ns ## COG: alr3088 COG1104 # Protein_GI_number: 17230580 # Func_class: E Amino acid transport and metabolism # Function: Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes # Organism: Nostoc sp. PCC 7120 # 15 374 4 379 387 219 37.0 1e-56 MSQLKPGSVHHDRAYFDHAATSPLRREAREAMACTVPGNPGAIHGSGRAARALLEDAREE IASLLGVGPLEIVFTSGGTESDMLAVMGAVRDGHALVSAVEHPAVGGLVSPWLLGKRCEL LPVNHAGLVDPDEVGGHSGNLDVVSVMAVNNETGACQPVSRVAEAAHQAGALMHTDAVQA LGHIPVDLDGWGVDLASFSAHKIGGPVGIGALWVKRGVELHPVSPGGGQQYGMRSGTQPV ALACGFAAALRACVDEFDTMTARWQSWRRRVIAWCRQQPEVTVDDAPMTSPSIIHLSVAG ARGTDLVMLADRDGIDLSAGSACHAGVSRPSPTMLAMGRDDDAASSGLRISMGYTTTDVD IDRLLVTLPATIRKASGAR >gi|302034487|gb|GL383264.1| GENE 309 304394 - 305494 768 366 aa, chain + ## HITS:1 COG:Cgl1211 KEGG:ns NR:ns ## COG: Cgl1211 COG0482 # Protein_GI_number: 19552461 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain # Organism: Corynebacterium glutamicum # 1 356 1 364 365 369 57.0 1e-102 MKVLAAMSGGVDSAVAAARLVEAGHDVTGVHLALSRNPRSHREGSRGCCSLEDSFDARRA ADRLGIPFYVWDFSDRFVAEVIDPFIAEYRAGRTPNPCLRCNERIKFAALLERGLDLGYD AVATGHYARTKVVDGVTKLYRSVDPGKDQSYVLAVLNQDQLSHSLFPLGNSLKMNVRQEA AALGLSVADKPDSNDICFIPDGDTPGWLSEKIGSADGEIRDESGALVGHHNGYHHFTIGQ RRGLRLGVPAPDGKPRYVLDIEPVNNTVVVGGAEGLTVHHIEAIRPVWCSSEPVETWHGQ AQVRAHGDPVPAIISAVPGGVAVELEDSLRGVAPGQAAVFYDGDLVVGSATICGTDRAGV KAEQAA >gi|302034487|gb|GL383264.1| GENE 310 305617 - 306477 290 286 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4180 NR:ns ## KEGG: HMPREF0675_4180 # Name: not_defined # Def: methionine synthase, vitamin-B12 independent (EC:2.1.1.14) # Organism: P.acnes_SK137 # Pathway: not_defined # 1 286 43 328 328 529 100.0 1e-149 MIGRATAVLVDLPVDHGPGGWRLADSTDHAARSARSWLRSDLDDLEEVLADKEASVKLSF AGPLTLATGLHLRAGESILADGSALADVTTSLAEGVSQLIAELRRRMPRVTWTLQIDEPS APAVLSGAVPTQSGLYRYPAMAGSTAVQLWQTVVSGCGEAEVGMHCCGAPIPWVLARKAG FSTMWCEVASLLNLDRVAGWVESGARLGMGVVDTMQVDKVPLVDRLIDRVLWLVRRLEID PAVLKSGILSPACGLAGWSRHDAAEVCRTVKRAGDLVDEQLDQASR >gi|302034487|gb|GL383264.1| GENE 311 306488 - 306700 278 70 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4181 NR:ns ## KEGG: HMPREF0675_4181 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 70 1 70 70 127 100.0 2e-28 MGFFTNLNLDGQTPVRTRPRVGEEQWAPAAVPTTKRKKAQRVLAPIAFSVALAVLVGVGY YFFRIIVVGG >gi|302034487|gb|GL383264.1| GENE 312 306726 - 307238 521 170 aa, chain - ## HITS:1 COG:no KEGG:PPA1120 NR:ns ## KEGG: PPA1120 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 170 1 170 170 306 100.0 2e-82 MEVYLTWQFWYQVLSAFAFGVASSLVPVLNSELFIVGALGSRLLGPLEVALGLALGHGVG KQVMFVGIRKGSNSRWIKHKEPKPVAVGSWRWRLRRWNDQAAHIVETPRWGMPLLFFSAI TGIPPVYLVVIYAATTKMNFWWFSLWVTLGFFIRCYLLALATQYGFHFII >gi|302034487|gb|GL383264.1| GENE 313 307245 - 307856 553 203 aa, chain - ## HITS:1 COG:no KEGG:PPA1121 NR:ns ## KEGG: PPA1121 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 203 47 249 249 400 100.0 1e-110 MIRIQLPDTPGSLGSVATAMGTANADISAIEIVEKGPDYVIDDFILTLPPTTMPDTLVSA CGMLDEVHVLWLSRYPENWSIESDIAALNRMSEDPEHSAEILCGAVPVVFHTQWAALFDV DEQVIISTALAPEFTAEGIARLAPMDRTHTAELEADWMPGWGDTIIAVVPLSQGRCLVVG RQGGPGFLASELNRLQHMAALAN >gi|302034487|gb|GL383264.1| GENE 314 307998 - 308321 240 107 aa, chain + ## HITS:1 COG:MA4522 KEGG:ns NR:ns ## COG: MA4522 COG0721 # Protein_GI_number: 20093307 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit # Organism: Methanosarcina acetivorans str.C2A # 11 101 2 92 93 69 37.0 1e-12 MPSTRRFIVALTPDDVVRLAGLARIDLTDDETAYLAPQLDAILDAVAAVSGVATDDVPPT SHALLLSNVFREDVIKESMSSHDALAMAPRSENQRFRVPRILDEEAQ >gi|302034487|gb|GL383264.1| GENE 315 308318 - 309823 438 501 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163737840|ref|ZP_02145257.1| 30S ribosomal protein S4 [Phaeobacter gallaeciensis BS107] # 1 483 1 456 468 173 30 1e-41 MNELLTLTAAELGERIAARQISSEEVTQAHLDRISEVDGDIHAFLLVDHAGALDAARRID ARIADGEHLGPLAGVPLAVKDLFCTKGIATTASSQMLEGWIPPYDSTIVTRCKDAGMVIL GKTNLDEFAMGSSTETSAFGPTHNPWDLERVPGGSGGGSAASLASFQAPLALGTDTGGSI RQPGAVTGTVGIKPTYGSTSRYGVIAMASSLDTPGPCARTVLDAALLHQAIAGHDAMDQT TINQPTPAVVEAARQTDVSGVRIGVVTELSGQGYDPQVEARFHEAVEMLIEAGAEVVEVS CPNFDLALPAYYLIQPAEVSSNLARYDAMRYGLRVNDDGEHSAEQVMRATRGAGLGAEAK RRIILGTYALSAGYYDAYYGSAQKVRTLIQRDFEKAWQMCDVLVSPATPTTAFRLGERTA DPMAMYRSDLCTVPANMAGSPAGSFPIGLSETDGMPVGMQVMAPIMADDRIYRVGAALER LLHEKWGAPLLAKAPEVRGER >gi|302034487|gb|GL383264.1| GENE 316 309820 - 311313 1199 497 aa, chain + ## HITS:1 COG:MT3089 KEGG:ns NR:ns ## COG: MT3089 COG0064 # Protein_GI_number: 15842567 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) # Organism: Mycobacterium tuberculosis CDC1551 # 4 494 14 504 509 603 63.0 1e-172 MTDELLPYDEVMANYEPVVGLEVHVELSTATKMFCGCSTDTDKDPNTNVCPVCLGLPGSM PAINGHAVESAIRIGLALNCHIAQWCRMARKNYFYPDMTKNYQTSQYDEPICYDGWLDVE ADGETFRVEIERAHMEEDAGKSLHVGGSDGRISGASHSLMDYNRAGVPLIEIVTKPIRGL GAKAPQVARAYMAQLRDIMIALGVSEARMERGNLRCDANVSLMPRGSETLGTRTETKNVN SLRSVEGALRYEIQRQGYLLSEGRKVRQQTRMWQEAGEYTIAGRDKSDAEDYRYFPEPDL VPIAPSREWVEQLRAELPELPAAKKARLSSQWQFSEADMTSAVNAGALDLLEATVDAGCQ PAAARKWWLTELSRRANEAGVDLAEVGMTPCQVAQLQKLVDDGTLTDKLARQVIDGVIAG EGDPQQVVDGRGLAVVSDDAALGSAVDDVIAANPQIAEKIRGGKVQAAGALIGQIMKVMK GQADAKRVRELILEKLS >gi|302034487|gb|GL383264.1| GENE 317 311336 - 311971 470 211 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4187 NR:ns ## KEGG: HMPREF0675_4187 # Name: not_defined # Def: conserved hypothetical protein TIGR03085 # Organism: P.acnes_SK137 # Pathway: not_defined # 1 211 1 211 211 397 100.0 1e-109 MSIAQDERAGLAADLSRLGPDAPTLCKGWTARDLLTHLLLRENDPLAVPGMAVNVFDAVT QARADRLEASGSFENLVARFAHGPGRFSVFRIPGLDSAANSMEYFIRHEDLLRAQPDWRP RELGHRTELRLADIIRKYGRALARRSPVGVRVEMTGQTDPVTLHPGDRIVTLVGKPSEVI LLLTGRTSVAQVDVLGEPATIAAFMRSDRSL >gi|302034487|gb|GL383264.1| GENE 318 312060 - 312437 266 125 aa, chain + ## HITS:1 COG:MT1641.1 KEGG:ns NR:ns ## COG: MT1641.1 COG0139 # Protein_GI_number: 15841059 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosyl-AMP cyclohydrolase # Organism: Mycobacterium tuberculosis CDC1551 # 10 119 2 111 115 155 76.0 1e-38 MRRVQTEEPTLAPAIAARLRRNDAGLVPAVVQDAATGDVLMMAWMDDVALARTLATRRAT YWSRSRQEYWVKGETSGHTQHVCSVRLDCDGDTLLLRVDQVDGACHTGDHTCFDADVLLA EEVES >gi|302034487|gb|GL383264.1| GENE 319 312434 - 312751 299 105 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4189 NR:ns ## KEGG: HMPREF0675_4189 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 105 1 105 105 159 100.0 3e-38 MIDVASSREEFVARAVNHTVVPVRTALVSDDDTPVGAMTYSVARIRLRGRTVALKDRVRH VQAGAGSVLGLVGSRDNAECESKAVAVIQVVQSSGSLSALREDER >gi|302034487|gb|GL383264.1| GENE 320 312799 - 313437 147 212 aa, chain + ## HITS:1 COG:no KEGG:PPA1128 NR:ns ## KEGG: PPA1128 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 212 18 229 229 363 100.0 2e-99 MMTAVLVSVSSRRIWLERAGIGLTGADVTGGLMTATALMLIVTVAFLFVVRTIGRRVTGV LQALVGIGIVAIVVTHRTATAHQWAAQGVDAGAPQVHVSAWPWVCLVAGALTILSGIGLA VLADRWPSRSARRTGELTGDPRSVWDALDRGEDPTVGDVVEVPAEKVESALPLSHNEASC PGSSESTVDKSVHSDSSGSHNGQQTRIDGTSG >gi|302034487|gb|GL383264.1| GENE 321 313551 - 313766 248 71 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4191 NR:ns ## KEGG: HMPREF0675_4191 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 71 1 71 71 85 100.0 5e-16 MSADRATRHYQYGGSPANWAGSIVALIGFIVATVGAMAGPSWTTCIMGAALVVLGGVVTL VMRAMGYGGAR >gi|302034487|gb|GL383264.1| GENE 322 313767 - 314567 617 266 aa, chain + ## HITS:1 COG:Rv1611 KEGG:ns NR:ns ## COG: Rv1611 COG0134 # Protein_GI_number: 15608749 # Func_class: E Amino acid transport and metabolism # Function: Indole-3-glycerol phosphate synthase # Organism: Mycobacterium tuberculosis H37Rv # 7 254 4 251 272 216 53.0 4e-56 MPPTVTGTVLDGIISGVLEDLHERQLMVTSDNLREATELVAPAIDPIPRLTAPGLSVISE IKRSSPSNGQLAAIHDPAALADQYRSGGAAAISVLTEERRFQGSLADLDAVRAKVEIPVL RKDFVVAEYQVLEARAHGADLILLIVAALSDDDLQRLYDLAIELGMTPLVEVHTPEEVSR ATALGARVVGVNARNLKTLEVDKTIFRELLGELPENVVKVAESGILCVDEAVEVYDLGAD AVLVGEMLVRHGEPAQVLRKIHRATV >gi|302034487|gb|GL383264.1| GENE 323 314595 - 315851 907 418 aa, chain + ## HITS:1 COG:ML1272 KEGG:ns NR:ns ## COG: ML1272 COG0133 # Protein_GI_number: 15827654 # Func_class: E Amino acid transport and metabolism # Function: Tryptophan synthase beta chain # Organism: Mycobacterium leprae # 7 409 20 416 417 508 62.0 1e-144 MSARDLPDARGHFDRFGGRFVPEALQAALSQLTGTFEAAVTDPDFLTELEDLRREYAGRP SPLTEAPRFSQYIFQQTGHQVRVLLKREDLNHTGSHKINNVLGQALLTRKMGKRRLIAET GAGQHGVATATVAAMMGMECRIYMGQIDTERQALNVARMQLLGAEVIAVEAGSRTLKDAM NEAMRDWVAHVEDTHYLIGTASGPHPFPKLVREFQRVISAEARQQCLDRVGRLPDAICAC VGGGSNAIGSFAEFIDDPEVRLYGFEAGGDGVETGRHAASITRGSVGVLHGTRTYILQDP DGQTMESHSISAGLDYPGVGPEHSWLAARKRATYLPVNDREAMEALRTLTRTEGIMPAIE SAHAVAGVLKIAKDLPAHDGEPSVVIVTVSGRGDKDVDTALKWFAMDGSVDATTGGME >gi|302034487|gb|GL383264.1| GENE 324 315848 - 316345 177 165 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149916131|ref|ZP_01904653.1| 50S ribosomal protein L25/general stress protein Ctc [Roseobacter sp. AzwK-3b] # 1 143 1 141 263 72 33 2e-11 MTGSASVYLRAHQENRPALVGYFPVGHPSVPHSIDAMKALTTGTTGTGVDLVVIGMPYSD PMMDGTVIQHVTTGALERGVRTRDTLLATEAVAGTGTPCVIMTYWNLVEHYGVDAYARDL ASAGGSGLTTPDEAEDRGDSVTVGIDRMCAIVDDLAAGVRRAERQ >gi|302034487|gb|GL383264.1| GENE 325 316342 - 317181 614 279 aa, chain + ## HITS:1 COG:Cgl2037 KEGG:ns NR:ns ## COG: Cgl2037 COG0682 # Protein_GI_number: 19553287 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Prolipoprotein diacylglyceryltransferase # Organism: Corynebacterium glutamicum # 1 262 1 272 316 254 48.0 1e-67 MSQLSIPSPSIEAFHLGPLTIHIYALCILAGIVVAYISGGRRYQARGGKQEQFEELCALA VIAGIIGGRLYHVITDHQLYFGPGRTWYHCFFIWQGGLGIWGAISLGGLAIWLYCRRKGI RFASVADSLAPGILAAQAIGRLGNWFNQELFGRPTSLPWGLEIDLSHRPAGYLQYATFHP TFLYELVWSLVGAVFLLWVDRRWTLDHGRLFTLYVAIYTFGRFWVERLRIDPAHHVGQWR LNDVTALVVFTGAVVILIVLQRRYGKGDEHSSCPAHKTR >gi|302034487|gb|GL383264.1| GENE 326 317303 - 321820 3385 1505 aa, chain + ## HITS:1 COG:MT3974_2 KEGG:ns NR:ns ## COG: MT3974_2 COG0069 # Protein_GI_number: 15843491 # Func_class: E Amino acid transport and metabolism # Function: Glutamate synthase domain 2 # Organism: Mycobacterium tuberculosis CDC1551 # 383 1186 1 813 815 1024 64.0 0 MIFGHHPRQGLYDPQFEHDACGVAFVATMTGVASHKIVEQGLEALRNLDHRGATGADPAA GDGAGILVQVPDAFLRRTTGIRLPEPGSYAVGLAFMPVDEAQRARARAAIELIAADEGIK VLGWREVPVHTHTLSEISLGTMPHFEHLLIRARDGRVGMDLEHLAFVLRRRAQHEAGVYF ASLSSRTLVYKGMLTTHQLEEVFPELHDTDLSSAVALVHSRFSTNTFPSWELAHPYRLIA HNGEINTVRGNRSWMQAREALLQSDLIPGDLARLYPICTPSGSDSASFDEVLELLHLGGR SLPHAVLMMIPEAWQENTEMSQELRDFYEFHSFLMEPWDGPACVIFTDGNQIGAVLDRNG LRPARYWVTDDGLVVFASESGVLDLPDAHVVEKGRLKPGRMFLVDLTEHRVVDDLDIKAR LASAKPYGEWLDQGRIDLDDLPERTHIIHSHASVTRRQQLFGYTSEELKMLVAPMANQGV EATGAMGTDTPLAVLSNRPRMLWDYFSQLFAQVTNPPLDAIREELVTSLTGTIGPEANLL EPGPESCRQVVVNYPIVDSDQLAKIIHIDADGEHPDRKTHVVRGLFVVEEGGEGLRRRIE EIRAEVSEAIAEGTTIIVLSDRHATRELAPIPSLLLTSAIHHHLVREKTRTRAGLVVEAG DVREVHHVALLMGYGASAVNPYLLFESAEDMARREVWVSTDPETAIHNVYKALGKGVLKT MSKMGVSTISSYTGAQIFEATGLSQELIDEYFTGTTSRIAGVGLTEIAQEILARHLSAYP ETGVRLAHRTLKPGGHYQWRREGEQHLVDPESIFRLQLAARTNDYEQFRRYTDHINDNST RLMTLRSLLEFRHARPAVPLAEVEPANEIVKRFSTGAMSYGSISIEAHQTLAIAMNRIGG KSNTGEGGEDPERLYDPERRSAIKQVASGRFGVTSEYLVNADDIQIKMAQGAKPGEGGQL PGSKVYPWVAKTRHSTPGVGLISPPPHHDIYSIEDLKQLIHDLKCVNPRARIHVKLVAET GVGTVAAGVSKAKADVVLISGHDGGTGAAPLTSIKHAGGPWELGLAEAQQTLLLNGLRDR IVVQCDGQLKTGRDVVVAALLGAEEFGFATTALIVEGCVMMRKCHTDTCPVGVATQNPEL REKFAGDPDHVVNFMMMMAEQTREILAELGFRSIDEAVGHVEALDTRKAITHWKARGLDL SPILHQVDLPHGSPLRHVRDQDHDLETSLDMKLIDMCTEALTNGTPVRQEVSIRNVDRTV GTMLGSRVTVATQGKGLPDNTIDLTFTGTAGQSFGAFVPRGMTMRLIGDANDYVGKGLSG GRVIVAPPLKTPFQPRDQIVAGNVVGYGATSGEILLCGQAGERFCVRNSGVTAVVEGVGD HGCEYMTGGEVLVLGAIGRNFAAGMSGGMAWVRNLDVSRLNADMVDALPMEQADVDRVTE LLELHQTETGSTLAGEILAQGAGGIRESFMKVLPRDYATMMKAMVDAEEHGLDENETTFM EVSHG >gi|302034487|gb|GL383264.1| GENE 327 321813 - 323285 1155 490 aa, chain + ## HITS:1 COG:MT3973 KEGG:ns NR:ns ## COG: MT3973 COG0493 # Protein_GI_number: 15843490 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Mycobacterium tuberculosis CDC1551 # 1 484 1 483 488 516 57.0 1e-146 MADLHGFMNVTRQEAERRPVEERVQDWKEVYPGGPGHALLPIITDQASRCMDCGVPFCHT GCPLGNLIPDWNDLIWRDEWREALSCLQTTNNFPEFTGRLCPAPCETACVEGLNRAPVTI KNVEVAIIDKAWEDRRVIPVVPEWHSLKTAAVVGSGPAGLATAQQLTRAGHTVVVYERDD AIGGLLRYGIPDFKMEKSVLDRRIKQMALEGTVFKTNTEIGVDITGEQLRERFDAVVLAT GATVPRMLDAPGIGLDGVCYAMEYLTQQNRVVAGAEVLDQIRADGKHVVIIGGGDTANDC VGTAVRQGAASITQLQYNPEPPKDRSANYPWPTYPLILRVSSSNEEGGQRVYSTNTVEIV SNDRGHVKAVRVVSGHRDENRVFIADEGSEHDLPADLVIFAMGFAHPEYDGVVAELGLEL DGRGNIIRNDAYETNVPGVFACGDAGRGQSLVVWAIAEGRAAAHGVDAYLKGSPSVLPKP VKPSDRQMTV >gi|302034487|gb|GL383264.1| GENE 328 323373 - 323651 233 92 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4198 NR:ns ## KEGG: HMPREF0675_4198 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 92 18 109 109 178 100.0 6e-44 MIRHAKALTWVCVALFVVLDVIGLTAPSQSDPRFVLGAFGGAASFLGIIGAGVWWASLAS QRRARVLDDRLDCELDIEDDARGNDRREPPAV >gi|302034487|gb|GL383264.1| GENE 329 323661 - 325850 1085 729 aa, chain + ## HITS:1 COG:Z3695 KEGG:ns NR:ns ## COG: Z3695 COG1680 # Protein_GI_number: 15802961 # Func_class: V Defense mechanisms # Function: Beta-lactamase class C and other penicillin binding proteins # Organism: Escherichia coli O157:H7 EDL933 # 260 694 30 429 430 337 42.0 6e-92 MIDDIRRRTVLGASMTAIVTAPLADRTLRAFGSDTRGLTIHLVGAPTTSRVEVRGLDGRI RRFSTRPEALSRVAIVSVPSRRFAVRMDSGRWRWLVRGDADQVWIMRDGDHEDPATYRTA LPVPSEGVRVMSGRCWISVDWLARAAGWPLSRGAVPFDGLSSVPSDLLTVRRGGDVETFD TRRNLHARNFEEKFFHDEPNLMIQPVDGMVVGGQYWLTAGVVRRLWDVRLVRVGRQLIAL ERMHVGFDVLGTSRDVGALGFDQSKLARVGSWIDDQVKAGFSGTSVLVCRHGQIAWRHHA GQALKYSTEVIDHTVHKARLLPPAKQVPVTATTRFDIASNTKMYAVNLALQMLVGQGRID LSRQVCTFPGWEAFRDESTVYTGSWTVGGPGGIKSPFTGKKTIRLVDLMHHRGGLVPDPQ YPNATVAGELYLQNLDDISNRTDVIDRICRTPLMYAPHTERAYSDVDYMILGLIVEQVVG KRLDEYLQEGVYRRLGLERTGFRPLDIRTPPDLIAATELNGNTRDGNVGFGTRPDGSPVF IRTQTIRGQVQDEKAFYTMSGVSGHAGLFSTADDLGVLLQLMSNEGMYQGREYFPADVQR RFLTPDGDSATYGLGWRTNGYYYFHGGPSKAAFGHTGWTGTITMVDPIRDIQIVLLTNMR HSPVVEPPNEFAAGAFPLAHYVGLISRVYSALAEDGRVTDVDAPLLERAASSPTSSHRFR VVPRRRSSR >gi|302034487|gb|GL383264.1| GENE 330 325949 - 326596 676 215 aa, chain - ## HITS:1 COG:RSp0426 KEGG:ns NR:ns ## COG: RSp0426 COG3247 # Protein_GI_number: 17548647 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Ralstonia solanacearum # 13 186 8 181 186 59 26.0 5e-09 MSSQTLSKTWKSIWWIPFTKGILAIVAAVVALLWSRQTMTALVIIVGIYAIIDSVMTLVN AQALHGMAGTGFMKGWGIIGIIIGVILILHPGFSLHVIAIFMGVWLVLLGVFATSFALPL RLVTQKAWGWMFGGGISLFVLGIVILVHPGFGVVAMSWLLALGVLLYGVANLAIAVGIRK ITSSISLAMRRNPHNTIIEGDVVDSPDTSAHPELK >gi|302034487|gb|GL383264.1| GENE 331 326606 - 327478 675 290 aa, chain - ## HITS:1 COG:PM1714 KEGG:ns NR:ns ## COG: PM1714 COG1737 # Protein_GI_number: 15603579 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Pasteurella multocida # 5 269 7 269 288 152 35.0 6e-37 MDDSLLPRIDMARTTMRPAEAQVAAVILAKPDWTLAASTSQLAEAAGVSPATVVRFCRAL GMSGYRELRAELARDLSRRTLELERSSVAEGTITLDDSLTQMITKIAFHEARTIENTARA VDADELEAVASAISIAPRTALFGVGSSGLVASDLSEKLERIGLVCQHHQDTHMQLVHAAL CKRPCVALGISFSGNTQEVVEALTVAQKHGSTTVAMTGLPDSPVGRLADHVLVTSARETQ VRAGAMSSRMAQLAVVDFLFARVAQLCMDDLETLLSSTRTAVSTHRKSLT >gi|302034487|gb|GL383264.1| GENE 332 327604 - 328518 461 304 aa, chain + ## HITS:1 COG:BH3575 KEGG:ns NR:ns ## COG: BH3575 COG2103 # Protein_GI_number: 15616137 # Func_class: R General function prediction only # Function: Predicted sugar phosphate isomerase # Organism: Bacillus halodurans # 9 299 6 296 298 293 56.0 3e-79 MDSLTNLATTEGRNPASEELDQLPTLDVLRLMNDEDHRVPDAIASQLSAIAAVVEAAVKG LSAGGRLIYAGAGTSGRLGVLDAAECPPTFSTNPTMVVGLIAGGQQAMFQAVEGAEDDAD RGAEELNMLQPGPHDVVVGLAASGRTPWVLGVVRAAKRAGAVTASVCCNHRAVISSEVDL PVEIDAGPEVLTGSTRLKAGTAQKLVLNMISTATMVGLGKTYGNLMVDVSPSNEKLRQRA MSIVIAATGCSCDDAITALHEAGGHAKTAIVMVLLGMTATQARARLAEAGGVVRVAVDEN HLRL >gi|302034487|gb|GL383264.1| GENE 333 328538 - 330055 1113 505 aa, chain + ## HITS:1 COG:BH3574_2 KEGG:ns NR:ns ## COG: BH3574_2 COG1263 # Protein_GI_number: 15616136 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Bacillus halodurans # 131 503 1 354 355 244 40.0 2e-64 MDYHLLAREILDLVGGPDNIASFTNCMTRLRLNLIRPETADAEAINGLAGVLGVVEGKEL QVVVGPGHAERLRSAFGEVMGSVDYTPATDTDATTQVTPPGTAKRGVDSAVVETEPSSVL EGDTDIAVRTKKMVRGTQTSRVQAMFRHIGNIFVPIIPGFIACGLVTAICGIWKTIDPTV ADDGWFLVLVGLGGIVIASLNFIVGHNTAQECGGSPVLGLIAGGVPYMPALAGTAATDKT AAIPLTIPIFGKLQPGLGGVIGVMITAWLFTVIERRLRKVVPAAIELFLVPAVTLLLGAA ASIFVIMPLSSLLMKGLTWLLVDFALAKGGIIGGFILATFFLPMVMLGIHQGLTPIHAQL IANHGFTELLPILAMAGAAQVGMAIAVLMKTRNPKLRSVIKSALPIGILGVGEPLIYGVS LPLLYPFLTACLGGGFGGAFIAWGTQNSGTFGSQAFGLSGLLMAPVISAGKWGWYLGGWL ISVIMGAVLTYLFGFKDSMAERIMD >gi|302034487|gb|GL383264.1| GENE 334 330062 - 330505 242 147 aa, chain + ## HITS:1 COG:no KEGG:PPA1143 NR:ns ## KEGG: PPA1143 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 147 1 147 147 267 91.0 1e-70 MRSVYLTNESCGLVARQAASHSKVIFASLQVPETEYAKSFTLVALKRVGCRTSCPRPGAE ITSRWRVERPRLFTDRGLLVAFILAEMGLRAPLRRGLPNLEYERYGNAWIIVLHRTGAAV TLTEEELPNETRSCDDEKEQDYVFLGS >gi|302034487|gb|GL383264.1| GENE 335 330486 - 331430 465 314 aa, chain + ## HITS:1 COG:SSO3218 KEGG:ns NR:ns ## COG: SSO3218 COG2971 # Protein_GI_number: 15899921 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted N-acetylglucosamine kinase # Organism: Sulfolobus solfataricus # 1 259 1 260 298 82 29.0 1e-15 MCFLGVDIGGTSVRSLVTDAGGKILGYQRIARVSHESLWQAINDCLGTVLAQSSVVHVEA AVVGAAGAGPTGNHDVCQSVEKAFRAVGLDVTPQVVTDIEIAYWSAAVLGDGSILVAGTG AIAGRFSEWRCVDRRDGAGWLLGDHGSGYWIGRKALRAAAADLDRRGPSTTITRGVVEAL GLPRGCTVQGLIGKTKELRPADVASFAQIVLSAQDDKIASIILADAASELVTTVKSVGAE HVILAGGLLAPNTSHNHQRPNTLRAMMEDSLGECPYASHPVVGACWAAGRLRGVELHKVD LMNALEVRSDSRRR >gi|302034487|gb|GL383264.1| GENE 336 331559 - 332437 198 292 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4205 NR:ns ## KEGG: HMPREF0675_4205 # Name: not_defined # Def: Tat (twin-arginine translocation) pathway signal sequence # Organism: P.acnes_SK137 # Pathway: not_defined # 1 292 43 334 334 586 100.0 1e-166 MWQQCVERALQCFPTGGGYHTGRNIPPGFRQTAWTGLDRAVRVTATGVCVDPYLATPSFC SSATYLLLLKSLELYEKTCGVMPPRKEWEYLKPYTVDHRPYPIQNDGVGAWGRANANGPG MAELAHELKIGTNLYIGTTGEYANLADRNEMFASIRRYDFMKIFWNDEIGKDERGHMVVV LGRSSHSNRSRHRVGTVRYWSSNGSHTDINGGYGIKCVSEDKIHRAVVTRVDRPWNVWNT EVMGPTDVCAPLAEIAADRNMTPDELKQLVEAKSCWPRRFSGSQGAHGRYVR >gi|302034487|gb|GL383264.1| GENE 337 332434 - 333864 849 476 aa, chain + ## HITS:1 COG:lin0017 KEGG:ns NR:ns ## COG: lin0017 COG2723 # Protein_GI_number: 16799096 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Listeria innocua # 2 475 8 472 477 362 39.0 1e-99 MKRILWGGATAASQYEGGFYDGKGMDTQDCRRWIPRLSNDTIQTRLLTEADIRNAKNSRS DDCRFPFRMGSRGYEYWESDLHYITSLGLDVYRLSISWARLFPTGFEDQPNPEGVMYYDR IIRTLAHAGIKVFITINHYAMPIAIVDKYGGWRHRDVIDLYLKMAKFVVDRWQENVDYWL PVNEINSGYFSPYNGLGIIGTIDYSYDYRSVFNGLHYQMIASALITKYGRDIGARGKFVC MVSCFDYYALHPTPEDNMKLVHDEQINQWWCADVLATGEYGYYTEKFLADHGVVLDITDK DRGILRSNTCDIVSFSYYSSSICSVDEKREQVPGNLVPTLRNPSLEATEWGWQIDPMGLR ITAHKVYDRYRKPIMVAENGLGARDNVDSDGRIHDNYRISYLERHMEQAELAVREGVDIE AYFVWGIIDIVSAGSCEMEKRYGVVYVDADNEGRGTYKRLPKDSFYWYRDFIASHR >gi|302034487|gb|GL383264.1| GENE 338 333926 - 334204 177 92 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4207 NR:ns ## KEGG: HMPREF0675_4207 # Name: not_defined # Def: PTS system, lactose/cellobiose specific IIB subunit # Organism: P.acnes_SK137 # Pathway: Phosphotransferase system (PTS) [PATH:pak02060] # 1 92 12 103 103 181 100.0 6e-45 MSSAIVLKDLEKEFQKLGEPLRAKAVGSGQAQDEISAGEWDLVLVAPQVRNRLKTFQQYA DRHGIPICAIPPIAYGPLGGSELVKTVKEHLG >gi|302034487|gb|GL383264.1| GENE 339 334210 - 335478 585 422 aa, chain + ## HITS:1 COG:BS_ywbA KEGG:ns NR:ns ## COG: BS_ywbA COG1455 # Protein_GI_number: 16080890 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Bacillus subtilis # 1 421 1 439 444 268 37.0 2e-71 MEKFFNFLDRRVAGPMSMISEQRHIRAIRDGVISAIPFIIAGSLILIIAAPPVPETSGFA MWAKDHAEQILIPYRMTFGIMSLYVCFGVGSSLARSYDLSGLAGGQLGVAAFLLSLTPKT LGGGIYVALESLGSKGLFPAMILALLAVEVMRICYKHNLTFRMPEQVPESVSRSFGAVVP AFIIMGVMTLISVVFKIDFVDVVQQGLSPLVKAGDSLPGVLVPAFLVVFLWFFGISGDSV VGSVARPVWLQYLSDNADAVASGVPAPHIAPETFFQWFVSIGGSGATIGLVIAGFLVGRA RYTKSIMRAVAVPALFNISEPIMFGLPVMMNPFFIIPFLLAPLVLCVVTWFAFSWGFVTY MAVQPPWTLPAPIGAFLTTGGDWRAIVLCLVNILISTVIYYPFMRMYDRDQLKKERCEEG GA >gi|302034487|gb|GL383264.1| GENE 340 335475 - 335840 266 121 aa, chain + ## HITS:1 COG:CAC0383 KEGG:ns NR:ns ## COG: CAC0383 COG1447 # Protein_GI_number: 15893674 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIA # Organism: Clostridium acetobutylicum # 30 115 14 100 106 72 45.0 3e-13 MTSQCGSDSPDGGAVMSEIETAIFTIITSAGEARASLYQALDKARAGEMAESEQCMIEAD TQLKKAHDVQTELITRDLNGSLPMSLLLVHAQDQLMTTMSEQSLIEHMIGLIRDIGMNGG K >gi|302034487|gb|GL383264.1| GENE 341 336540 - 336743 78 67 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313792017|gb|EFS40118.1| ## NR: gi|313792017|gb|EFS40118.1| hypothetical protein HMPREF9575_02002 [Propionibacterium acnes HL110PA1] hypothetical protein HMPREF9589_01018 [Propionibacterium acnes HL059PA1] hypothetical protein HMPREF9612_02350 [Propionibacterium acnes HL063PA2] hypothetical protein HMPREF9591_01961 [Propionibacterium acnes HL086PA1] hypothetical protein HMPREF9597_01301 [Propionibacterium acnes HL005PA4] hypothetical protein HMPREF9598_01382 [Propionibacterium acnes HL050PA1] hypothetical protein HMPREF9600_02039 [Propionibacterium acnes HL050PA3] hypothetical protein HMPREF9608_00900 [Propionibacterium acnes HL067PA1] hypothetical protein HMPREF9620_02297 [Propionibacterium acnes HL037PA1] hypothetical protein HMPREF9590_00876 [Propionibacterium acnes HL059PA2] hypothetical protein HMPREF9602_01800 [Propionibacterium acnes HL030PA2] hypothetical protein HMPREF9581_01986 [Propionibacterium acnes HL087PA3] hypothetical protein HMPREF9584_01693 [Propionibacterium acnes HL092PA1] hypothetical protein HMPREF9588_02162 [Propionibacterium acnes HL025PA2] # 1 67 1 67 67 128 100.0 2e-28 MGQSVDHLAQVSNDKSQHHGNGGAKKELASSRCPRDSFTHCLTHVVRQYLAFAPGVIRDV LGADYSV >gi|302034487|gb|GL383264.1| GENE 342 336805 - 340377 3384 1190 aa, chain + ## HITS:1 COG:MT1598 KEGG:ns NR:ns ## COG: MT1598 COG0587 # Protein_GI_number: 15841014 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit # Organism: Mycobacterium tuberculosis CDC1551 # 2 1185 6 1182 1184 1259 54.0 0 MARSDFVHLHTHTEYSMLDGAASNEKLFAEVARQGMPAVAMTDHGNMFGAYEFFQISKKY DGDQNPLIKPIIGIEAYVAPSTRKSRVQEFWGTSRDAGDPDAEGGKDVSGGGRYTHMTMW AKDSEGLHDLFRLSSLASYEGYYMKPRMDRELMGQYSGGIIASTGCPSGEVQTRLRLGQF EEACQAASDYRDIFGRENYFCELMDHGVPIEKQVRSDLLKLAKKLDIPLLVTNDSHYVTE DQADAHDSLLCVGVGRNKDDPNRFRFNGSGYYIKSSEQMRALFPDHPEACDNTLLLTEMI GSYDEVFKYVDRMPQFDVPEGETQESWLRKKLQEGLDEKFGPNPPKEVLERLETELSVIE PLGFSSYFLVVSDICNAARSMGVPVGPGRGSAAGSLVAYLTGIIAINPLEHGLLFERFLN PERVNPPDIDLDFDDRQRDKVIDYVTHKYGAEYTSQVNTFGKIKAKAAVKDANRILGYPF ALGDKITKAMPPDVMGKGVPLDKIFDSSHERYGEGQEFRQLVADNPDVAKVVETAKGLEG LIRGTGVHACAFILSSTPLLDLVPMHKRDKDGMIIAGFAYPQLEEMGLMKMDFLGLRNLG IMDHCIKIIKANRGIDVDLKNIALDDKTTYEMLARGDTLGVFQLDGTAMRSLLRLMGPTC FDDIVAVLALYRPGPMGANAHISYAQRKNNREPVIPIHPELKEDLDEILAPTYHLIVYQE QIMSIARKLAGYTLGGADLLRRAMGKKKKHILEENFIPFQAGMREHGYSDDAIQTLWDVM VPFAGYAFNKSHAAGYGLVSYWTAYLKANYPAEYGAALLTSVGDDKDKMAMYLADMRAQH INVLPPDVNASSLEFTAVGEDIRFGLGAIRNVGANAVAEIIRAREENGPAPDFFTFLDQV SLTVCNKRLIESLIKAGAFDSMGHSRRGLMAVYGQAVDAVIDIKRNQANGQDDLFGMGDD SQPTQMGVERVVPDDDWDRSTKLAFEREMLGLYVSDHPLRGLEAALEAESDISVAELVNP EGHHEGRYTVVGMVTQIVRRTTKNGDIWASVTLEDLDASITIACFPKVYQRVEPLLAVDS ILKVRGFVRERDETVEMSANDIWLLDLTDASKAPMTIDMRRGRCTRGTLEELRGVLRNHP GSSEVRLRLIDGKVTTTFRLADELKVTQGQPLMADLKALLGPSCVPRRQQ >gi|302034487|gb|GL383264.1| GENE 343 340383 - 340928 352 181 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4212 NR:ns ## KEGG: HMPREF0675_4212 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 181 4 184 184 285 100.0 9e-76 MTRARMIAILRLSLLVIAMGIVLGGLAAPLWHSMVTLPTYTVGSDGAATTTEKGLTQVFS TDATYCLIGLVVGLIIGCLSWVLMRRRGAWGVLAAGISACLSALACWWVGVLIGPDSFAE RIASAKSGEVIPIDFALHTWVAVLVWLLAAMVPMLIASLLAARRGASRTGRAKTSTGASL D >gi|302034487|gb|GL383264.1| GENE 344 340933 - 342252 949 439 aa, chain + ## HITS:1 COG:Cgl2049 KEGG:ns NR:ns ## COG: Cgl2049 COG0141 # Protein_GI_number: 19553299 # Func_class: E Amino acid transport and metabolism # Function: Histidinol dehydrogenase # Organism: Corynebacterium glutamicum # 1 436 1 432 442 406 54.0 1e-113 MLRIVDVTSETTDDLRCAVPRADFDVDAAMAAVIPVCSAVRDRGVEALREYSEKFDHVVP EHLRVPVEALATAAANLDGTLRRAFSESIRRRRHVCQEAEVEASSQPVEVAGGARVSQRI VPVGRVGLYVPGGFAPLASSVIMNVVPAQEAGVSSIAVASPPQAEFGGLPHPSILALCHL LGVNEVYAVGGAQAIAMFAYGVEGSDEADSCPRVDMVTGPGNIYVVAAKRCLRGTVGIDS EAGPTEIAILADKTADPRHIAADLMSQAEHDTLAAAVLVTDSTTLAEAVQRELAPMVSAT LHSERIRTSLTSKQSAIVMVRDIDQGLEVVNAYAAEHLEIQTADAAAVAARVRNAGAIFV GPWAPVSLGDYSAGSTHVLPTAGAACHSSGLSVRSFMRAVHVIDYTEDALLELADSVEAF ALAENLPGHANAITVRRSR >gi|302034487|gb|GL383264.1| GENE 345 342249 - 343415 850 388 aa, chain + ## HITS:1 COG:Cgl2048 KEGG:ns NR:ns ## COG: Cgl2048 COG0079 # Protein_GI_number: 19553298 # Func_class: E Amino acid transport and metabolism # Function: Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase # Organism: Corynebacterium glutamicum # 21 376 4 362 366 342 50.0 7e-94 MTQHRQTSQPRPVAKPEPNSIQLADLPLRSELVGAQPYGAPQLDVPVRLNVNENPYPPSE AVRKDMAKAVAKAAKSLNRYPDREATGLREDLARYIGFGISSSQIWPANGSNEVMTHVLQ AFGGPGRSVLTFTPTYSMYPEYARNTHTNYVTRPRNASWGLTTDEILSAIEEVKPDVVLL TTPNNPTGTTIPVAVIDEVCAGTDTIVVVDEAYQEFTDAPEDSSIALLPKYGRLIVVRTL SKAFALAGGRLGYAVAAPAVVDALRMVRLPYHLSDVSQVVARVSLAHAPEMLARVDELRE TRVNLEDWLQLHGLDVVSSQSNFVLFGRFADRHAVFQALLDRGVLIREVGPTGYLRVCAG TPRQTDAFRTALLDVLPTAPRLVLEEDQ >gi|302034487|gb|GL383264.1| GENE 346 343412 - 344032 478 206 aa, chain + ## HITS:1 COG:ML1259 KEGG:ns NR:ns ## COG: ML1259 COG0131 # Protein_GI_number: 15827645 # Func_class: E Amino acid transport and metabolism # Function: Imidazoleglycerol-phosphate dehydratase # Organism: Mycobacterium leprae # 2 204 9 210 210 234 59.0 7e-62 MTHRRARVYRETSESTVDVAIDLDGAGESTISTGVGFYDHMLTALSKHSGIDMTITTSGD VEIDGHHSIEDTAIALGQALAQALGDKCGITRFGDAVVPLDEALAQCVVDVAGRPWVVCS GEPEGQAYARIGGSGVPYPGAMTYHVVQSLAFNAGLCVHLRLLAGRDPHHICEAEFKALA RALRIAIAPDPRNAGRVPSTKGALNV >gi|302034487|gb|GL383264.1| GENE 347 344025 - 344642 424 205 aa, chain + ## HITS:1 COG:Cgl2044 KEGG:ns NR:ns ## COG: Cgl2044 COG0118 # Protein_GI_number: 19553294 # Func_class: E Amino acid transport and metabolism # Function: Glutamine amidotransferase # Organism: Corynebacterium glutamicum # 7 204 5 211 211 196 50.0 4e-50 MSDPVRVGIIDHGSGNLHSARRALRQVGAEVIVSNDPSALLDTDALVLPGVGALAACMTG LRAMGGARLVRQWVDEGRPLLGICVGHQMLFERGRERDVDVKCLGVLPGVVEELPAERLP HIGWNTVIPAADSALFQGVQERFYFVHSYGVVVTGPHDHFTTATHQGATFVAAAEYGPVT STQFHPEKSGTAGLALLTRWLNQLS >gi|302034487|gb|GL383264.1| GENE 348 344655 - 345422 358 255 aa, chain + ## HITS:1 COG:Rv1603 KEGG:ns NR:ns ## COG: Rv1603 COG0106 # Protein_GI_number: 15608741 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase # Organism: Mycobacterium tuberculosis H37Rv # 5 241 4 244 245 243 55.0 2e-64 MTGELTLFPAVDVQGGRAVQLQQGVASSERAFGDPLDVAQKWQGLGAQWIHLVDLDAAFG HGSNTKIISSVVEQLDINVEVSGGIRDQRSLESALSAGATRVNIGTAALEDPQWCDEVVG RYGEQVAIGLDVRGDQLTARGWTREGGKVLDVLARLEDAGCRRYVVTDVASDGMLTGPNY ELLGRICARTQGKVVASGGIATLEDLRRLRGLVPIGVEGAIVGTALYVGNFTLPAALDVC RAPIPADSSPMPPTD >gi|302034487|gb|GL383264.1| GENE 349 345572 - 346366 871 264 aa, chain + ## HITS:1 COG:MT2678 KEGG:ns NR:ns ## COG: MT2678 COG0217 # Protein_GI_number: 15842143 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mycobacterium tuberculosis CDC1551 # 1 263 1 251 251 307 64.0 1e-83 MSGHSKWATTKHKKAAIDAKRGKLFARLIKNIEVAARLGGGDPSGNPTLYDAIQKAKKSS VPNDNITRAVKRGSGEGADAVNYETIMYEAYGPAGVAILIECLTDNRNRAVSDVRVAVTR NGGTMADGGSVQRLFQRKGVVSVSKTYEVEEGRKTETREVDEDQLMEATIDAEPEDIVDE GEVFEIISDPSAVVDVRKAVQDAGIDYDSAEVSFKPDFTQRVELEDARKLYRILDALEDL DDVQNVFSNVDIPAEVAAALDEEE >gi|302034487|gb|GL383264.1| GENE 350 346408 - 346953 270 181 aa, chain + ## HITS:1 COG:Cgl1622 KEGG:ns NR:ns ## COG: Cgl1622 COG0817 # Protein_GI_number: 19552872 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, endonuclease subunit # Organism: Corynebacterium glutamicum # 1 171 1 171 213 155 50.0 3e-38 MGVDPGLTRCGVGVVEGGLGSPLKLIAVGVIRTPADLDHAHRLLRIHDGLEEWRDHTRPD AVAVEKVFAQHNRNTVTGTAQAAGMAMMIAARHGLPVALHTPSEVKAAISGSGRADKAQV GFMVARVLRLSAPPKPADAADAVALAICHLWRGGAARRIEAAVATQRRGRRVPRSWKDLA R >gi|302034487|gb|GL383264.1| GENE 351 346950 - 347555 500 201 aa, chain + ## HITS:1 COG:Cgl1621 KEGG:ns NR:ns ## COG: Cgl1621 COG0632 # Protein_GI_number: 19552871 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, DNA-binding subunit # Organism: Corynebacterium glutamicum # 1 200 1 204 206 119 38.0 3e-27 MISHFSGMVSAAGPTWVVLDNHGVGIKVLCPPATAASARINQDMSLHTSLVVREESLTLY GFVEADDRDAFELVQTASGVGPKLAAAIMSVLDAAQLATAITEEDDATLCRVPGIGRKGA AKMILELKDKVAALTPRGASVSGATHVVAPWREQVAEGLVGLGWSAKDAEKAVDKVAALK EADPAMTIGNLMRAALRSLAR >gi|302034487|gb|GL383264.1| GENE 352 347609 - 348631 496 340 aa, chain + ## HITS:1 COG:Cgl1620 KEGG:ns NR:ns ## COG: Cgl1620 COG2255 # Protein_GI_number: 19552870 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, helicase subunit # Organism: Corynebacterium glutamicum # 6 337 31 362 363 410 64.0 1e-114 MEHSPVDPSAEPPEKAEEAALRPGALAEFGGQQRVADQLGLVLAASKSRGTTPDHVLLSG PPGLGKTTLAMIIASEMSAPIRISSGPAIQHAGDLAAILSSLVPGEVFFLDEIHRMSKPA EEMLYLAMEDFRVDVVVGKGPGATAIPIEIPPFTLVGATTRAGLLPGPLRDRFGFTAQLD YYEVADLERIVTRSAGVIGVELAEGAAHTIASRSRGTPRIANRLLRRVRDWADVHHESPV TPQGAETALDLYEVDPLGLDRLDRAVLHAVCLKFGGGPVGLSTLAISVGEEPQTVEEVAE PFLVRLGFLMRTPRGRVATDRAWRHLGLEPPPDSSGEGLF >gi|302034487|gb|GL383264.1| GENE 353 348692 - 349123 371 143 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4222 NR:ns ## KEGG: HMPREF0675_4222 # Name: yajC # Def: preprotein translocase, YajC subunit # Organism: P.acnes_SK137 # Pathway: Protein export [PATH:pak03060]; Bacterial secretion system [PATH:pak03070] # 1 143 1 143 143 258 100.0 6e-68 MPLLASPLGGFMPLLIIFIVLIGFTLWQGKRQVKKQQEERVQLESRLEVGTRVVLSSGLF VTITHIGDKQAVVELAPGVEVSVLKQAIVRPAGDEEEFAFADDVPTENSTVHDDVATESA NDVLTSPEASAVNAHTSDEQPQA >gi|302034487|gb|GL383264.1| GENE 354 349196 - 350854 1118 552 aa, chain + ## HITS:1 COG:ML0487 KEGG:ns NR:ns ## COG: ML0487 COG0342 # Protein_GI_number: 15827164 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecD # Organism: Mycobacterium leprae # 2 544 42 596 597 291 39.0 2e-78 MIFLVIIIVMYVLMGVMRTWSPKLGLDLRGGTSVTLTAKTEDGKAPSATSLEQARLIIGQ RVNALGVGESSVKTMGDRNIVVSAPNVESSKLVEMVGQTAQLGFRMVYAEEPVSQKSPTP GKAKPSAPSALPTVEPSASASAAPDASASSKGGTTSSASQYNEKDPQSAAKMVKAAEEWK PTPEDQKAFEDYKCAKSVDSPGDKPLVTCDRERTMKYLLSPVAITGTQVVSADSGIPQGQ LSYVVNLKFNSIGTTSFSDATTYLCSKMSPQNQFAVVLDGKVISSPQLNGNTGTSCPING GEAQISGHFTQNSAADLANVLKYGALPLSFDISSVDNISPTLGGEQLRAGIIAGIIGLIL VGGYCLLYYRGLGLVTLGSLVIAGITTYAAMVLLGEAVGFTLSLAGIAGAIVAIGVTADS FIVYFERIRDEIREGRTLRTALQTGWAKARGTILMADGVSLLSAIVLFVLSVDQVKGFAF TLGLTTVIDLIICFFFTHPIVTVLGRTRFWGQGRRGSGLEAEHMGVTESQLLGRRSRRSA SRAKRTIESEEA >gi|302034487|gb|GL383264.1| GENE 355 350856 - 352031 1057 391 aa, chain + ## HITS:1 COG:MT2663 KEGG:ns NR:ns ## COG: MT2663 COG0341 # Protein_GI_number: 15842125 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecF # Organism: Mycobacterium tuberculosis CDC1551 # 4 390 18 417 442 228 38.0 1e-59 MTDDMNAQTSSVATKRPSDGATGKKRKRSFTHALYTGEISYGFIQRRKVWYTITAVVIII SFIGLLVRGLNLGIEFKGGVQFRAPAHVATSTIDDVRKSVLSSGAPDMDATEVVSLGSDA VQVQTRALNNDETTKVQEAIAKATGTKMSSVTYSKVGSQWGEQITGKAIKALVVFLVLVM LQIWAYFRHWKMSIAALVALLHDLIVTIGIYALVGFTVSPSTVIGVLTILGYSLYDTVVV FDKVRENVQDIDKRDYTFAEGANRAVNQVLVRSINTTIVGVLPVAALLFAGAFVLGSGPL EDLGLALFVGMIVGAYSSIFIATPVFTQLREHEPAMKEHTARVLRRRERAAQKAPRVTAE TVAAEGPRDVTTITGSDRHQPRRSTRAERKK >gi|302034487|gb|GL383264.1| GENE 356 352028 - 352561 400 177 aa, chain + ## HITS:1 COG:alr4582 KEGG:ns NR:ns ## COG: alr4582 COG0503 # Protein_GI_number: 17232074 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Nostoc sp. PCC 7120 # 8 163 3 161 172 169 54.0 2e-42 MTYRKDLIASLIRDVPDFPEPGVTFKDITPLLANPNGYAAAISELVDTASRDVDVVLGME ARGFMFAGPVALSLGAGFVPVRKPGKLPGDVYSQSFVLEYGSATLTVHQDAVQPGSKVLI VDDVLATAGTVRATASLVEQLGAELVGVSVLIELSALGGREKLDRAGIGPVNAVLTI >gi|302034487|gb|GL383264.1| GENE 357 352564 - 353256 416 230 aa, chain + ## HITS:1 COG:Cgl0753 KEGG:ns NR:ns ## COG: Cgl0753 COG1226 # Protein_GI_number: 19552003 # Func_class: P Inorganic ion transport and metabolism # Function: Kef-type K+ transport systems, predicted NAD-binding component # Organism: Corynebacterium glutamicum # 21 230 22 227 353 199 52.0 5e-51 MVSESPESSGRHSVFEQTARVKLPFKATEPFWELVKRLAWSAVLLLISTLIVWVDRDSYV DSTAGDGVSLIDAFYYSTVTVTTTGYGDITPVAPHARLINALIITPLRITFLVLLVGTTL EMLANEGRRGLLDSAWRKRMRNHTVVIGYGTKGRSAVNTLRNHDVPVEKIVVIDSRPSAV AEANRSGLAAFEGDATRRDLLRRAEISKAREVVITLNRDDSAILTTLTVR >gi|302034487|gb|GL383264.1| GENE 358 353311 - 353658 282 115 aa, chain + ## HITS:1 COG:Cgl0753 KEGG:ns NR:ns ## COG: Cgl0753 COG1226 # Protein_GI_number: 19552003 # Func_class: P Inorganic ion transport and metabolism # Function: Kef-type K+ transport systems, predicted NAD-binding component # Organism: Corynebacterium glutamicum # 1 99 247 344 353 67 38.0 7e-12 MLRESGADAVVTSADAVGRLLGLSSVNPYVGTVVDDLLSSSKGMEVVQRMVSESEVGARP ADIQNERVLAVIRNDVLRNFYDPSVGQLQAGDVIVVVRKAVPRRHESQTESDLVR >gi|302034487|gb|GL383264.1| GENE 359 353629 - 353859 74 76 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAGLRLAQGSLARTVRAIDAIVGHRVTSWQARPLILVVCRVSVSVECAARGLGATSADSK VSPLALFSAHQVAFSL >gi|302034487|gb|GL383264.1| GENE 360 353788 - 356112 1969 774 aa, chain + ## HITS:1 COG:Rv2583c KEGG:ns NR:ns ## COG: Rv2583c COG0317 # Protein_GI_number: 15609720 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Guanosine polyphosphate pyrophosphohydrolases/synthetases # Organism: Mycobacterium tuberculosis H37Rv # 47 774 58 788 790 847 57.0 0 MTDDSVYGPYGSGKGTLGKPKPGQQRPQPRMRMRERIVRWGTPKPPAPTQSVTDPLISVV LANHPKADTAIIERAYRTAEHYHRGQSRKSGDPYITHPLAVTMILAELGMDERTLCAGLL HDTVEDTSYTNEQLTADFGEEIALLVDGVTKLDKVQYGDSAKAETIRKMVIAMSRDIRVL VIKLADRLHNMRTLGFLRPDKQNRIAKETLEIFAPLAHRLGMNAIKWELEDLCFSTLNPK LYDEIVHMVAERAPQREAQLKDVITIVRQDLDEAGIKAIVYGRPKHYYSIYQKMVVRGRD FSDIYDLTGLRILVDTPRDCYAALGVMHVRWNPLPGRFKDYIAMPKYNMYQSLHTTVLGP GGQPVELQIRTHEMHRRAEYGVAAHWKYKENPNAVGRGIQPDGTDLSWVQSLNQWSKEES DPSEFLDSLRFEINSREVYVFTPKGDVMSLPQSATPVDFAYAVHTEVGHRCIGARVNGKL VTLDTKLNNGDVIDILTSNAPDAGPSRDWLGFIASPRARSKIKSYFTKERREESIEAGKD AIAKQLRQAGVPLQSLLTVEYLSAVADDLRVPGINALYAAVGEHNASAQSVVEKLIALGG GPEEATADVEEELAVGVKAPRRRRSSETGVMVDGDPDMLVKLARCCTPLPGDPIMGFVTR YDGVSVHRTDCSNAKNLLEHPERIVSVSWSDDRQESYQVTIQVEGLDRAGLLVDTFRVFA EQGVSVISANMSTSKSHLARLRLTFEAPDPTHLKHLTESIRRISGVYDVFRVKS >gi|302034487|gb|GL383264.1| GENE 361 356177 - 357460 1333 427 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4229 NR:ns ## KEGG: HMPREF0675_4229 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 427 1 427 427 659 99.0 0 MNTFGSLSGKMGRMSHAQAPQSFGRVDDDGTVYVRTSDGERSVGQVPDSTSEEALEFFVR RYRALETEVSLLESRVSSGTASPEEARSAASKLVTSIREANAVGDLESLAARVEALTPTI DAKAETRREERAEAKARAKQAKEEMVAQAEAIAAGSDWRGGIGKFRDLLDQWRRLPRIDK TTDDELWHRFSGARTAFTRRRKQHMAEQNHLRERARIVKEHIIEEARPLAESTAWGETSR QFRDLMNRWKAAGPAPRDVDDKLWKEFRAIQDTFFDARTAAQSQQDEEYRGNQEVKEQLL DEAEKDILPVKDIEEAKVKLRAFLEKFNEVGRVPRDAMKRIDARVRDLERQVHSAEEAEW KRTDPQARERARATVDMFSAHIDKLNAQVEKAEAAGRTKDADKARESIKTYQTWLDEAQK ALDEFSA >gi|302034487|gb|GL383264.1| GENE 362 357453 - 358124 501 223 aa, chain + ## HITS:1 COG:Rv2581c KEGG:ns NR:ns ## COG: Rv2581c COG0491 # Protein_GI_number: 15609718 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Mycobacterium tuberculosis H37Rv # 1 220 1 219 224 160 42.0 1e-39 MFIASFITGPFQTNCYLLAREQGSECVIVDPGMGAEEFLGDALRTHHLVPVAIAVTHGHI DHIGSARQVGDEYGIPVLCPRDDRHLLSDPMAGLSDFARPLIEQWYGSTTLREPEQVVDV EPFSHHQFANLDLEFLHAPGHTPGCSMIRTIDAEFGPIVMSGDVVFAGSIGRTDMPGGDP AQMSYSLSDVVWSLDDSTHVLPGHGGPTTMANERLTNPFLGRR >gi|302034487|gb|GL383264.1| GENE 363 358224 - 359588 1215 454 aa, chain + ## HITS:1 COG:all5012 KEGG:ns NR:ns ## COG: all5012 COG0124 # Protein_GI_number: 17232504 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Histidyl-tRNA synthetase # Organism: Nostoc sp. PCC 7120 # 8 433 13 447 462 254 36.0 4e-67 MARLKPLSGFPEFLPSGQMVENHVTRILEETFELHGFAPIRTRAVEPMEQLTRKGEIDKE VYVVDRLHADPHDTRSGKDRLGLHFDLTVPFARYVLENAGHLYFPFRRYQIQKVWRGERP QEGRYREFTQADIDIVGDQTLAEHHDVETPLVMLSALERLHTELGFPTVTMHVNNRKLSE GFYRGLGIADPMAVLQRVDKYDKIGPDAVRKLLVDELNLSDDAAAKCVALASIQSTDDSF IAKVRELGVANDMLEEGLDSLNRVVAAVNKAVPGRMVANLKIARGLDYYTGTVYETELTG HESMGSVCSGGRYESLASDGKHVYPGVGISLGLTRLLAPILSRGELSSSRSVPSAVLVAV NTEEDRATSEVIASALRSRGIPCEVAPKADKFGKQIKHADRRGIPFVWFPGVKHADYRDA DTVKDIRSGDQVEADAGAWNPPTEDLHPGVIGTW >gi|302034487|gb|GL383264.1| GENE 364 359645 - 360337 528 230 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4231 NR:ns ## KEGG: HMPREF0675_4231 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 230 1 230 230 421 99.0 1e-117 MTDRREVTCRRWRATFFVLASLASLTWAFAGVLNPAMSQLHAFVSEYSARDQPWRYLFQT TDVIMGTLLCLAGLATLVWARHRPLGRQGWSGVGFVAGGFFSVLDALVTMDCSPTRSQAC MAAEEAGHVSVNHIVHVGTSTIVVVGFALPILLLNSTMTRFRGFGLVVTWAWVVFTLLNG IGAVGWFVGTPMDYTGIWQRFSLGLGTLWWLILAADDIVTARVQDRARSC >gi|302034487|gb|GL383264.1| GENE 365 360330 - 360893 336 187 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229859876|ref|ZP_04479533.1| acetyltransferase, ribosomal protein N-acetylase [Streptobacillus moniliformis DSM 12112] # 1 180 1 182 187 134 32 9e-30 MKLVGTHPIHTDRLVLRRWSVDDAQQMYDNLASDTEATRFVTWPPHPNVDATRLLLTGWV RGYDDPATFNWAVWLDEVIIGQIAVVDVDTRVNLAELGYCLGKRWWNHGYATETVKAVMS YLLDTAQVNKVEARHDPANIASGRVMENAGMVIEGLRRACVMDSCGPRDSQYHGLLRSEW RGQQADD >gi|302034487|gb|GL383264.1| GENE 366 360927 - 365309 3259 1460 aa, chain - ## HITS:1 COG:CAC2401_1 KEGG:ns NR:ns ## COG: CAC2401_1 COG1924 # Protein_GI_number: 15895667 # Func_class: I Lipid transport and metabolism # Function: Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) # Organism: Clostridium acetobutylicum # 1 663 7 663 663 704 51.0 0 MGLDVGSTTIKAVILDPDENILFEDYRRHHADITGAMASLLGDAADALPGAKVRTTVTGS AGLGTAEALGLTFIQEVMAETAAVQRWNPDADVLLELGGEDAKITYLKPVPEQRMNGSCA GGTGAFIDQMATLLHTDTPGLNDLASRAKTIHPIASRCGVFAKSDLQPLINEGARHEDLA ASVLQAVATQCIAGLACGRPIRGKVIFLGGPLHFMPSLRDAFSRVLDGKVDAYITPDRAQ LYVAMGAALTSTSEPVDLAETAKRSRHARTQNGISQSMPPLFRSEEELDEFNRRHSHAKL PRLPLHDARGSLFLGIDAGSTTIKSVLIDESLNIVASHYASNEGDPVSAAVQILADLYDT MPAEATIARTCTTGYGEGLVKAALEAEDGEVETMAHYRAADHLLPGVTAIIDIGGQDMKY LRVVDQVIDSISVNEACSSGCGSFLQTFAAGMDTDIESFSSMSLLAQHPVDLGSRCTVFM NSSVKQAQKEGASPADIAAGLSYSVVRNALYKVIKLTDPAQLGNKVVVQGGTFLNNAVLR AFEKLTGREVVRPAEAGLMGAYGAALTAHARFHAGEPTTSEGLRERAELDGFAVETHRDD CALCQNHCQRTIATFSDGRVFVSGNRCDRGAEVNNRKMAKLPKSELPNVFEDKYKRLFSY RRLTAKKAFRGDLGLPRALNMYENYPFWFTTLSALGYRVMISGRSSHALFEKGMESIASE NICYPAKLNNGHVEDLVQRGVKRIFDPCIRYEQVSVADADAHFNCPVVASYPEVIRANVE SLRDKDVELISPFLSLADPDKLAERLAEVFADDDVTVDEARRAIAKGLEEDKAFHDEIRK MGEDALAYMAEHNVPGIVLAGRPYHVDPEIHHGIPEMVNSLGMAVLTEDSVAHLGADLLE RPLRVRDQWMFHSRLYQAAAFVGSRPDLELVQLNSFGCGLDAITTDQVREILAARDRIYT TLKIDEVSNLGAARIRMRSLQAASKERASHNRNLVTHPLSDDRVPFTKEMKATHTILVPQ LAPYQTSIAEAALRASGYQVEVLKQASRENIDYGLSVVNNDACFPAIVVIGQLVSALKSG KYDLDHTTLFLTQTGGMCRATNYIGLLRKALKDAGFGNIPVIAASLQGVEDNPGFSLTAP LIHRMVQAITLGDLLQKVHLRTRPYEAVPGSADSLMRRWTTIVREHFLNGGHSTTWGRRT SYKAMINSIVDNFEHLELVDGPRKPRVGVLGEILVQFHPDANNHIVETIESEGCEAVLPG LMWFVYNCLSAGDYNYKTFGTDKWSRHVKKAFRALLMHYQKPVTTALRKSTRFEVPTPIT ELMADAQRIVQLGNQAGEGWYLVGEMVDMIREGVPNIAVVQPFACLPNHVTGRGIFREIR RQFPQANVVSVDYDPGASQVNQLNRIKLMAATARDRNVNEERDVGQAVRPEPDEKIPISP PTASRPDLKGKPVMELFVHL >gi|302034487|gb|GL383264.1| GENE 367 365444 - 366088 541 214 aa, chain + ## HITS:1 COG:MT1725 KEGG:ns NR:ns ## COG: MT1725 COG1309 # Protein_GI_number: 15841142 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mycobacterium tuberculosis CDC1551 # 9 209 6 199 207 88 32.0 7e-18 MSQSQCARSSRRGPRGEVGAARAAILAAARSLFLAGDFQSVSLRAIAREAEVDTSLVSYY FGSKQSLYNEAMSLPNGPHRIIAEVCSRTDPDHLGEALVKAFIDAWDGHLGLGGPDPQMQ GVVQALLTQPDAFDMMRQFYTEEILAPVVNLLIPRFGAEEAGIRASLGLSQLLGIFTARY VIGLQSLANLPAAELIGREGPALQSTLTGPTING >gi|302034487|gb|GL383264.1| GENE 368 366208 - 367278 848 356 aa, chain + ## HITS:1 COG:no KEGG:PPA1174 NR:ns ## KEGG: PPA1174 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 356 1 356 356 729 100.0 0 MTIAIKMGFLDDSPIVDDQGRLVSRGGGTALVERLLDMYPGAVVVNYEDRQCDGFEARKL TSLEPLETLVINLDVIDSVGVFQTMHREGAEPKILNLQWLPPSHYHHKVNFAAMGLAYAL FPTLCSGERTAGEVTELVRRWTISPLAHQARVAWIQPGIRDDLAREHVDPEIPTVLYPAI HLTETKRPKIFLDVMNRVAADMDVRMEARLSQRDLASVMAMKMSSPKWASVGPLFGQREE YWESLARMTAFLATAKNEAYGFEYLEALVAGAIGVFPDTTWARKTVPEDYPYFYRTSDEA VSMLKEILNDPQTARNAINELAGGSIRDWILEHNQRSGGNEAMRKQIEEWFPEIQV >gi|302034487|gb|GL383264.1| GENE 369 367111 - 367473 107 120 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGSQHVSSFRCRRPRIDGTGRKTAYRRAMTVAIRTQMPMSCPAIASETTDAVAITTATAS VPQIGSHLDLREPLFDLLTHSFISARTLIVLEDPVADRPSGEFINSITRSLWVVEYFFKH >gi|302034487|gb|GL383264.1| GENE 370 367459 - 369279 1521 606 aa, chain + ## HITS:1 COG:Cgl1597 KEGG:ns NR:ns ## COG: Cgl1597 COG0173 # Protein_GI_number: 19552847 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aspartyl-tRNA synthetase # Organism: Corynebacterium glutamicum # 1 589 1 591 608 852 71.0 0 MLRTHDAGTLRASDIGKEVTLAGWVGHRRDHGGVAFIDLRDASGLAQVVIRDEILESSGA HDLRNEYCIRVTGVVEARPEGNANPNLPTGEIEVAITELEVLNPSAPLPFQIDEHVSVGE DARLKYRYLDLRRPHQHEALVLRSHVTHAIREVLDRHNFYDIETPTLTRSTPEGARDFLV PARLAPGCWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQPEFTQLDVEMSF VDQDDVIALAEETMAACWKIIGVDMPTPLPRITWHEAMDRYGSDKPDLRFGNEITEVTDF FANTAFRVFQAPYVGAVVMPGGASLPRRQFDAWQEWARTRGAKGLAYITISDEGVPEGPV AKNISEEEKAGIAEKVGAKPGDAIFFAAGSKTSSQELLGAARLEIGRRCELFDPSDWAFC WVVDAPLFKPTKEAEASGDVAVGTGAWTAVHHAFTSPTPDCLDTFDTDPGSALAYAYDFV VNGNEVGGGSIRIHRRDVQERVFNVMGIGPEEAQEKFGFLLDAFKFGAPPHGGIAFGLDR LVMLLGGFETIRDVIAFPKTGNGYDPLTAAPAPITPAQRREAGVDAKPKEPSGGQTSNAE AYKSTT >gi|302034487|gb|GL383264.1| GENE 371 369381 - 370769 910 462 aa, chain + ## HITS:1 COG:ML0510 KEGG:ns NR:ns ## COG: ML0510 COG2256 # Protein_GI_number: 15827173 # Func_class: L Replication, recombination and repair # Function: ATPase related to the helicase subunit of the Holliday junction resolvase # Organism: Mycobacterium leprae # 1 453 26 468 473 457 58.0 1e-128 MVSEDLFGNVTSAQSDATSGGSLDTPNPDAPLAVRLRPRTIDEIVGQQHLLTPGSPLRRL AEGTGAMSVFLWGPPGVGKTTIASVVSHATNRRFVEISAVTAGVKDIRRELDTARRQLAL GQPTVLFVDEVHRFSKAQQDVLLPAVENRTVTLIAATTENPSFSVISPLLSRSLLLTLKP LTEADVSSLLDRALSDPRGLRTESDRRYVLEDDARADLLQLAAGDARRALTYLEEAAAGA SAAGTDTITSQIVSTAVDRAAVRYDRDGDQHYDVISAFIKSVRGSDVDAALHYLARMIEA GEDPRFIARRLIILASEDIGMAAPSVLQTCVAAAQAVQLIGMPEARLNLAQATIAAATAP KSNAVITAIDGALVDVRAGKGGEVPAHLRDAHYSSAHDLGHGVGYRYAHNFPHGVAKQQY LPDDIASTRYYDPTDHGNEAAIAQRLSQIRALLGRDIEEEKS >gi|302034487|gb|GL383264.1| GENE 372 370766 - 371227 437 153 aa, chain + ## HITS:1 COG:no KEGG:PPA1177 NR:ns ## KEGG: PPA1177 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 153 1 153 153 224 100.0 8e-58 MTLGQIAGLIAALAAVVLVALCAVPLLKLGGVLDEVRKAVCDVDESTVPILEEVKSTVVI TNGEISKLDQVIEDIHTISGHGTIVTGQAAELAQTFTQTVGTPMVKAAAFGEGVRRTIHR PKRRMRQSQVENTVSPTEVSHSATAAEGGGEQD >gi|302034487|gb|GL383264.1| GENE 373 371373 - 374051 2369 892 aa, chain + ## HITS:1 COG:Cgl1594 KEGG:ns NR:ns ## COG: Cgl1594 COG0013 # Protein_GI_number: 19552844 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Alanyl-tRNA synthetase # Organism: Corynebacterium glutamicum # 1 892 1 888 888 797 49.0 0 MRTAEIGQRFVDFFESKGHTVVPSASLLYNDPTLLFVNAGMVPFKPYLMGTEPSPWKRAT SIQKCVRTLDIDEVGKTTRHGTFFQMLGNFSFGDYFKNEAIQYAWELVTKPAEQGGLGFD PASIWVTVLGPGFHPDYPEGDIEAREAWRAAGIPDEQIQGRSLKDNYWHMGVPGPGGPCS EIYIDRGPAYGPDGGPEADEDRYLEIWNLVFETEDLSAVRAKDDFDIAGPLRSLNIDTGA GLERIAYLLQGVDNMYETDQVFPVIEKASEMSGKRYGARHDDDVRLRVVADHVRSGLMLM TDGVTPGNEARGYVLRRLLRRVVRAMRLLGVADPVLPELLSVSRDLMADSFPDVLTQWDR VIGAATAEEDTFRRTLSSGTAMLDAAVVETKASGSKTLSGEKAFQLHDTYGFPIDLTLEM AAEQGLEVDRNKFTALMAEQRARAKADSQAKKGLLTDREAYSQVRALGETPFLGYTDLTV DTTVTGIIANGTSVTAAEPGAVVEIVLAETPFYAEMGGQDSDSGIIRANGIDFEVLDVQR PVPGLIVHKVHLDGDLAVGDRVTALVNPATRFGACQAHTATHVIHAALRELVGPSATQAG SYNKPGYLRFDFSATKGLSDSLKDEIEERCNVAIHDDFEVTDTQMPLEDAKAMGAMAMFG EKYPPIVRVVELAGPWSRELCGGTHVASTGRIGMLSLLGEQSVGSGTRRVEALVSTDAFR HMAAERALVNELTGILKVQPDQLADRVSKLAADLKEAERKLGAARTRELLGQVDDIVAGT TPAGSFDLVAAKVPGVAGSDLRTLAAEIRARVKDRPAVVTLIGGTHDKPAMIVATTESAR AAGAKAGALIKVGVAPIGGRGGGKDDIAQGAGSDPTGIDAALRAVNTELTAL >gi|302034487|gb|GL383264.1| GENE 374 374048 - 374530 293 160 aa, chain + ## HITS:1 COG:Cgl1593 KEGG:ns NR:ns ## COG: Cgl1593 COG0816 # Protein_GI_number: 19552843 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) # Organism: Corynebacterium glutamicum # 13 144 16 158 182 90 46.0 9e-19 MNPAERPDTSLCGVRLAIDWGKARIGVAASDRDAILAFPVETVHTADRPVQRLAEIVAEY EPVEVIMGLPVALNGTEQLAAQDVRDAGRQLAEAINPIPVRWVDERMTTRTAARALHEAG RNARKQRGVIDQAAAVAILEHVLEQVRLGQSETATGGADS >gi|302034487|gb|GL383264.1| GENE 375 374527 - 375636 1065 369 aa, chain + ## HITS:1 COG:MT2630 KEGG:ns NR:ns ## COG: MT2630 COG1559 # Protein_GI_number: 15842091 # Func_class: R General function prediction only # Function: Predicted periplasmic solute-binding protein # Organism: Mycobacterium tuberculosis CDC1551 # 40 356 62 405 417 159 30.0 8e-39 MSGPFNEHDDPKAEFWYKLRSAVAVILSLTVLVGGCVFVGVKVYDGYISYKSADDYLGDG EKDVLVRVPAGASVSEVGSILLDNDVVKSTKAYNKALRDSESDVTIQAGQYKLKTHMNAA KAVSILDNPDNIQRTRVTLPEGLTTEQQFGIMAKGTTMPVGSFQNAYKQTAKLGLPVWAK GRPEGFLFPDTYEVGSNPTPLEILQMQTNQFAKQVNTMNFIGQAQTIKRSPYDALIVASI LEREAKKPKDMQMIAGIIYNRLQQGMKLESDATVLYANHVEGKLTTNDEQRAKDSPYNTY LYNGLPPTPIDNPGATSMEAAVTPIKSDYLYWVVTDPDKGTTAYSKTLAEHEKNVKKFQA WCQDHKGKC >gi|302034487|gb|GL383264.1| GENE 376 375668 - 376474 532 268 aa, chain + ## HITS:1 COG:ML0515 KEGG:ns NR:ns ## COG: ML0515 COG0169 # Protein_GI_number: 15827177 # Func_class: E Amino acid transport and metabolism # Function: Shikimate 5-dehydrogenase # Organism: Mycobacterium leprae # 4 254 15 270 278 123 34.0 3e-28 MHCAVIGHPVAHSLSPAIHRAAYQVLGLEWSYQAIDVEPGGLRAFIEGLDGSWRGLSVTM PHKADLVELGETDATVDMLGAANTWVCRDGTTIVRNTDVTGAEAALRARGVTDVEKVVML GAGATARSVLAAAIGMGAGEAVVMSRSRERSTKILKLADGLGIRVAWLPFESEPPRCNLI VSTVPAGSLIRRAEDLAARANAVFDVVYDPWPTPLAVAGKIAGATVIDGLDLLAGQAVGQ VQLMTGYPVPMDVLRSTAQNGLAEHARL >gi|302034487|gb|GL383264.1| GENE 377 376488 - 377684 663 398 aa, chain + ## HITS:1 COG:MT2615 KEGG:ns NR:ns ## COG: MT2615 COG0082 # Protein_GI_number: 15842074 # Func_class: E Amino acid transport and metabolism # Function: Chorismate synthase # Organism: Mycobacterium tuberculosis CDC1551 # 1 392 1 392 401 440 65.0 1e-123 MLRYLTAGESHGPALVATMEGIPAHVQVGAVEISEELRRRRLGAGRGARMSFEADELELL AGFRHGETLGDPLAIRIGNSEWEKWRTVMAPGPVAPEDLAGHARAAALTRPRPGHADLAG MQKYDFDEARPILERASARETAARVALGAIAKAFLKQSLGIEVLSHVVSLGPVSAPNGPR PDPSDLTRIDADPVRCADSVTSKRMVAEIEACRKEGDTLGGVVEVLAYGLPAGLGSHSQG DRRLDARLAGALMGIQAIKGVEFGDGFDLTRRRGSQAHDWMEPTEGGIHRVSDRAGGTEG GMSTGQILRVRAAMKPIATVPRALPTVDVTTGEAANAHHQRSDVCAVPAAGVVAEAMAAL VLAECALEKFGGDSVTETRRNAQAYLDRLAARGLAVAP >gi|302034487|gb|GL383264.1| GENE 378 377681 - 378184 322 167 aa, chain + ## HITS:1 COG:BS_aroI KEGG:ns NR:ns ## COG: BS_aroI COG0703 # Protein_GI_number: 16077384 # Func_class: E Amino acid transport and metabolism # Function: Shikimate kinase # Organism: Bacillus subtilis # 2 162 14 176 186 103 38.0 2e-22 MIALIGAPGSGKSTVGPLLAQRLGEEFVDVDAVIEQAEGRDIPEIFLIDGESYFRKVERR ETLAAIERGGVVSLGGGAPADVEVGNALDRMCVVWLDVSARTAADRVGLKDTGRPLLGGQ VHSQLVRLMKERRAVYQRPATIRVATDTLTPEQVVDVIVSELADLKE >gi|302034487|gb|GL383264.1| GENE 379 378187 - 379272 847 361 aa, chain + ## HITS:1 COG:ML0518 KEGG:ns NR:ns ## COG: ML0518 COG0337 # Protein_GI_number: 15827180 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate synthetase # Organism: Mycobacterium leprae # 4 360 10 361 361 285 47.0 1e-76 MNLVEVATTKPYRVRIGSGAVHELAGLVAGRRAAVVCPQTLVHLVPRFGIDDLVVIEVPD AEAAKTPEVLVNGWRRLAEANMTRGDIIVGFGGGATTDVAGFLAATWMRGIDVIHVPTTV LAMADAAIGGKTGVNIPAGKNLVGAFHEPIGVLCDTELLTTLPAREVRSGLAEIVKCGFI KDPVILDVISNHPRLALDVTSQTFVEVLTRAITVKAGVVSADLHERTSSREEVGRERLNY GHTLAHAIEAHKHFTWRHGEADAVGMVFAAELSHRYLGLSDEVVARTRTILSEIGLPVTC DEIKWADLRKTMNVDKKTRVDPQTGRQVLRFVGIHKPGQVAMIVDPDEAALAECYDRCSA R >gi|302034487|gb|GL383264.1| GENE 380 379315 - 380415 503 366 aa, chain - ## HITS:1 COG:SPy0818 KEGG:ns NR:ns ## COG: SPy0818 COG2843 # Protein_GI_number: 15674859 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) # Organism: Streptococcus pyogenes M1 GAS # 39 323 86 377 430 105 28.0 1e-22 MPSRSTVEPTPARATSATPTKIATTQPLIHRNTNGSLTVTVSGDLLWHPSTWGTAREDGH GKNDFAPIFGTVAPILRNADVSICHEEVPVAPKGSQYSGYPEFAVPAEIAKGIAAVGFDA CSTASNHSFDRGLPGVKATLDALDAAHVKHSGTARTKEEADTPVIVSHGLKLGLVSGAYG LNGSTPPKGKSWAWSDIEADHLIKRAEAAKKAGADIVIVAAHSGLEYHHEPTGEQIRLAQ RLTASPAVDMVYCHHSHVVEPWTRMNGKIVMYGLGNLVAQQSSNMPGTDEGVVGRVTFTV RSGKVSTTKAEYIPILIGSKNDGPIRIHAVDTELKSGMGNQARLKSAQQDISRIVTSLGV DGVTEA >gi|302034487|gb|GL383264.1| GENE 381 380557 - 381507 593 316 aa, chain - ## HITS:1 COG:Cgl2657 KEGG:ns NR:ns ## COG: Cgl2657 COG2326 # Protein_GI_number: 19553907 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 28 316 19 306 306 398 68.0 1e-111 MYDLGSSQLPTSFDPATDSDQHSLREFIDLVADAGYVVDSDEHGDDPELIAPDGSAVETW HEDYPYPNLMDRREYETQKRLLQIELLKLQYSIDDTGERHVIIFEGRDAAGKGGAIKRFS EHLNPRRCRVVALDKPSDRELGQWNFQRYIQHLPTAGEIVLFDRSWYNRGGVERVMGFCT DEEHRIFLRQAPILEEMMIESGIHVTKFWFSVTRQEQRTRFAIRQLDPVRRWKLSPMDLE SLGRWDDYTRAKEEMFAATDTDAAPWICIKSNDKKRARLNAMRYFLSQYDYEGKDVDVVG QPDPRLVRRARDMVGD >gi|302034487|gb|GL383264.1| GENE 382 381655 - 381870 126 71 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVLEPDDRPQLAVKVENGAVLDVIGGDNHRSGPFGVVGWGDGRVGTASRSSPPSISVAES QCGPLLRKALP >gi|302034487|gb|GL383264.1| GENE 383 381784 - 382353 667 189 aa, chain + ## HITS:1 COG:ML0522 KEGG:ns NR:ns ## COG: ML0522 COG0231 # Protein_GI_number: 15827184 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) # Organism: Mycobacterium leprae # 4 187 3 186 187 246 63.0 2e-65 MVISTNDIKNGTVLNLDGQLWTVIWFQHHKPGKGNTVVRTKLKHVLSGKVVDRTFNSDVK IESAEVDRRDMQYLYQDGDTYIFMDESTYEQLPIPTEVVGDAKDFMLENQTATVALHEGN PLYIDLPASVELEITYTEPGLQGDRSTGGTKPATLETGREIQVPLFITTGEKVKVDTRSG DYLGRISEK >gi|302034487|gb|GL383264.1| GENE 384 382350 - 383135 231 261 aa, chain + ## HITS:1 COG:MT2608_1 KEGG:ns NR:ns ## COG: MT2608_1 COG0781 # Protein_GI_number: 15842067 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Mycobacterium tuberculosis CDC1551 # 39 168 10 144 166 93 40.0 3e-19 MSTNTVPTPDDEGPTEWIGDLEVRRVSGDIQEHADLSTRSKARKQALDILFEADLIGTDP LEVLAARPGVFTNPVRPFAADLVRGVAATQVGLDSVLTDCLSEGWTLARMPRVDRILARL GAFEILHTDTPNPAVISEAIELSEEFSTDDSAPFLNGLLGAVITHGPARVEDQPSDDAAS LTCPAPDGGSEQPPITVDDVGSMASSSDSFPAEVGNVDTTSGNASDPENSADDFELTGGE HPTSKDHELATDLHKKDTTDD >gi|302034487|gb|GL383264.1| GENE 385 383231 - 383551 249 106 aa, chain + ## HITS:1 COG:no KEGG:PPA1189 NR:ns ## KEGG: PPA1189 # Name: not_defined # Def: integration host factor # Organism: P.acnes # Pathway: not_defined # 1 106 1 106 106 157 100.0 2e-37 MSIPTLSPEQLSAAREAATRARRVRADFKAKVRSGNITLSEALDKAANDEVLAHVKVVDL LKALPRVGDKRAAEIMEHLEIAPNRRIRGLGHHQIAGLRAEFDQRS >gi|302034487|gb|GL383264.1| GENE 386 383606 - 384583 766 325 aa, chain + ## HITS:1 COG:ML0541 KEGG:ns NR:ns ## COG: ML0541 COG0194 # Protein_GI_number: 15827197 # Func_class: F Nucleotide transport and metabolism # Function: Guanylate kinase # Organism: Mycobacterium leprae # 21 197 25 202 210 172 53.0 8e-43 MSSVPVIPQARGLRHTGPVTVAVVSGPTAVGKGTVVGALLRSHPEIVVSRSVTTRPPRPT ERDGIDYDFITPEQFDKLVDGEGLLEWATVHNSHRYGTPRGPVERAVADNRTVVLEIDLQ GARQVRETYPQATQIFLAPPSWEELVHRLIGRGTETPEQQKQRLETAKVELANADEFDAV VVNDTVDHAVAHLVELLSLTKSVTISGGHSLTETTPEGIVNPPIDQLLEHVDSKYRLVLF AAKRARQINAYYSQLAEGLLENVGPLVETTNQEKPLSIAMREIQAGVVEAHEMDAEEIAA QAAAAQEAPAIELDDPFADLADPNA >gi|302034487|gb|GL383264.1| GENE 387 384596 - 385828 612 410 aa, chain + ## HITS:1 COG:Cgl1566 KEGG:ns NR:ns ## COG: Cgl1566 COG0452 # Protein_GI_number: 19552816 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantothenoylcysteine synthetase/decarboxylase # Organism: Corynebacterium glutamicum # 4 405 13 416 420 323 47.0 5e-88 MSVVVLGVGGGIAAYKACLLARLLSEVGHEVHVVPTRAALEFVGRPTWEALSGHPVHTEV FDDVPDVEHIRLAERADAIVVAPATADLLARLAGGHADDLLTTTVLATSAPVLLAPAMHT GMWQNAATVDNVATLRRHGLVVKAPATGRLTGRDSGPGRLPDPDEIAEFVDLLITVPECA AAMAQQDLAGKRVVISLGGTREAIDPVRYLGNSSSGRMGRAIAQVAAARGADVHVVAAHV DVAIPSDVQITRIDSTEDLAEAMDDLAKQADIVIQAVAAADFAPVAVDTKIKKHEGDDAT GATMALQLHQTPDVLARICSQSVQNRVVVGFAAETAPDRDQFLKLAQAKLARKGCDLMVV NDVSGGKVFGKVGTDVTMVHQQGPGRRITGSKSQAAVAILDEVRALLATQ >gi|302034487|gb|GL383264.1| GENE 388 385868 - 387061 890 397 aa, chain + ## HITS:1 COG:ML0544 KEGG:ns NR:ns ## COG: ML0544 COG0192 # Protein_GI_number: 15827200 # Func_class: H Coenzyme transport and metabolism # Function: S-adenosylmethionine synthetase # Organism: Mycobacterium leprae # 4 391 6 399 403 497 67.0 1e-140 MPTRLFTSESVTEGHPDKIADAISDAVLDAMLTEDSHSHAAVETVVTTGQVMVCGEVTTE AYVDIADIARSRILDIGYDSSSKGFDGASCGVSVAIDAQSPDIAQGVTAAYETRHGSTDL IDSQGAGDQGLMFGYACTETPSLMPLPIDMAHALSLQLTKVRKEGALDYLCPDGKTQVTI RYNEDDKPVAVDTVIVSSQHRAGIDLDATMTPDLRRLVIDPVLERYDLDHKDMRVLVNPT GKFVIGGPMGDAGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSGAYAMRWVAKNVVA AGLADRCECQVAYAIGAARPVGFRIDTFGTNHVPETVIERAVGEVFDLRPGAIIADLDLL RPIYSQLVAGGHFGRELPGVTWELTDRAEALAATARL >gi|302034487|gb|GL383264.1| GENE 389 387109 - 389118 313 669 aa, chain + ## HITS:1 COG:Rv1402 KEGG:ns NR:ns ## COG: Rv1402 COG1198 # Protein_GI_number: 15608540 # Func_class: L Replication, recombination and repair # Function: Primosomal protein N' (replication factor Y) - superfamily II helicase # Organism: Mycobacterium tuberculosis H37Rv # 23 668 6 654 655 337 38.0 6e-92 MTAPLLETTSWIAHVAVSSGLAHLDRPFDYLIPDDLVDRVQVGVRVRVKLAGRLCDGVVV AVDHEQQPGVTLAPVEKLVSDQVVATPDQLNFARHVADHWAGTLDEVLRWAIPTRHATTE AANPPPWPTPMTTMPSGTLTALDRGRRFLALLKAGERPRAHWRGSPVFGPGDDDHLGDWG NGLLQAVCATLTSGRSAVVCCPTVDDVITLHERFQAVLGAGTVAVLHADQPASTRWRHYL AVIRGTAKVVVGTRSAVMAPMTDLGLIAVWDEGSDLHDEPRAPYPNTRDVAALRAQIDHC ALLLASYSCSVRSASWLGSGWLVGIGADRPTMRAVCAPVRIPGDSDIAMERDPLARSVRL PDLAMTTIRDGLLHGPVLVSVPRVGDLVTPSCARCRTPVRCSSCGGPVTGRRTESGVNLH CTWCGSHLPPWRCPECGSTEVRSGIVGATTTAAELGRAFPDVPVVDSSGNHVRERVDSTP RLIVATPGAEPTPESGYACAVILDAVSSLSRPGLAAVEQTVDRWMAILALVRSVRDGGRA VIVGPSEDAALQAMVRNDPVGWATRELADRREAHFPPAVPCGIVDGDPKAVATAAQRLRE WFGTDLEMLGPAPQPRRASESERDRIIVRPRGTMPLAELSQGLFRLRSKHTMSREPGSLR VVIDPANLL >gi|302034487|gb|GL383264.1| GENE 390 389137 - 390084 275 315 aa, chain + ## HITS:1 COG:ML0552 KEGG:ns NR:ns ## COG: ML0552 COG0223 # Protein_GI_number: 15827204 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA formyltransferase # Organism: Mycobacterium leprae # 1 313 3 316 318 216 44.0 4e-56 MRLLFAGTPDVAVPTLTALVADPRHEVAAVLTRPDAAVGRHRTPRPCPVAKAAEELGIPA IKATSVKSGEGHDAITSLDADVAVVVAYGGLIPADLLAVPRHGWINLHFSLLPRWRGAAP IQRAIMAGDEETGACVFQLVESLDAGPVYRTMTVPIGPMTTAGELLDELAHTATPLVIEA LEDIEAGVEPTPQSVEGVTIAPQIHPDDVRVTVTAAAQEIDNLVRGVSPTPGAWAELDGK RFKILRTRCLEAGDGVPSTVATAQPGQLVATRKQLFLGTGSQPLELLQVQAFGKRAMSGA DWARGADIDAGTRLR >gi|302034487|gb|GL383264.1| GENE 391 390081 - 391457 656 458 aa, chain + ## HITS:1 COG:Cgl1561 KEGG:ns NR:ns ## COG: Cgl1561 COG0144 # Protein_GI_number: 19552811 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA and rRNA cytosine-C5-methylases # Organism: Corynebacterium glutamicum # 13 452 74 511 511 314 44.0 2e-85 MTQRVHQKRRKADPARRLAYSALLAVETHGAYANLALADHLRAAKLTGRDAAFATELVDG TSRGTGTWDRIIEAASCRAPAKLQPGVRVVLRMAAHQILAMRVPTRAAVASSVDLAGQVI GERVTGLVNAISRRISTHSLEEWATEIGGRDAVDVMALRTLHPTWIVKAFQDRLGADEVE DALLADNEPPVPTLVVRPGLAQRDELGSGTPTRYSPWGVVRPGNPSDVAAVREGRAGIQD EGSQLVILALVRAAKANSCFGQWLDLCAGPGGKSALLAGLANQHDTSLTAVELHEHRADL VSKALRTIPGDHRVMTADGTHPPLPKQSFAAVLADVPCSGLGSLRRRPEARWRRTPTDVE ELTQLQRRLLISAVNLTRPGGVIGYVTCSPHRAETIDIINSACATLPVDVLDAPAMLPNI PNIAASGNTNTIQLWPHRHGTDAMFCALLRKRDESGTY >gi|302034487|gb|GL383264.1| GENE 392 391597 - 392367 610 256 aa, chain + ## HITS:1 COG:no KEGG:PPA1197 NR:ns ## KEGG: PPA1197 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 256 1 256 256 368 100.0 1e-100 MTTTLMKTCLLGMAGAMTFSLVACGNNSSSTGTPASTTVARSSTSVTASPTPVEHEQTKA PKHLSQDDFTKAISSKKINNQTFTIVDNSQIAAQMNQVTKVMSQAKISPAECGKILKQSI SSVTGGELNNIISAIGSDQSAPTTVTFNTTMSSRQKKSFETEDKQFSKCGHVAMDLQGHK TTMTMKLTPIKGYQDISKKASLYTTVSSSGNGPKTSSYQAYVWLNDDQMIQVTAQDAQTA QSTLKSALNALGIVAK >gi|302034487|gb|GL383264.1| GENE 393 392713 - 393558 969 281 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4260 NR:ns ## KEGG: HMPREF0675_4260 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 271 1 271 281 424 100.0 1e-117 MKIKFIAAPLVAGALMVPATLSTPAAQAAVPTIPAVSSNTADAHKLLEGVNGRITSLNDD LKVAKASLSPMEVIDTIADLLKQAKQLKAQLEKIVKGVVTFAKSIPARVELFLAMCDTTH TATLTLQDKVQNAHSTVFLAIAHAINVLITINSTPAQLTDEVAALKKAIAAAQAMPDLKP TDVATKYVRAKLGRLMVQVRFDRNTCVINYKDRDAVRLLNRAIIRAGQVRSNAWVRVADV DQAIKELKAAYQDALKAPNKKSAPASPSSCMPAADAPVAVA >gi|302034487|gb|GL383264.1| GENE 394 393737 - 394408 490 223 aa, chain + ## HITS:1 COG:MT1452 KEGG:ns NR:ns ## COG: MT1452 COG0036 # Protein_GI_number: 15840866 # Func_class: G Carbohydrate transport and metabolism # Function: Pentose-5-phosphate-3-epimerase # Organism: Mycobacterium tuberculosis CDC1551 # 5 220 10 225 229 229 56.0 3e-60 MVVRITPSILNANLANLASEVGRIPSADGLHIDVMDGHFVPNLVMGAPFVESLRPATNLM FDVHLMIENPDRWARQYVEAGAQSVTFHLEAATAPIKLARELRSMGARASVALRPATPVE QLADILTEFDQILLMTVEPGFGGQKFLDPVLAKIRKARKLIDATRKDIWLQIDGGVSADT IERAAEAGADTFVAGSAVYRSDNPDHVVASLRNRALAAQVCAH >gi|302034487|gb|GL383264.1| GENE 395 394425 - 395318 486 297 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4262 NR:ns ## KEGG: HMPREF0675_4262 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 297 22 318 318 580 100.0 1e-164 MNVLGHSGAKGRESQTKAGANLGTMRFRHMDRPWVVVAFGGWNDAGTAATQAASLIAEYS DAKIWRTIDGEVFHDFRQTRPAITVMNDLEIVSWPSTAIRVGRWQGQPIVVVDGPEPSLR WRTYCFRLLRRLRKLNPAGLVVLGAMATDVAHTRQLPVMVSATDPNLISELGAEKLEYDG PTGIPFVFVTEARRHGMNAIGLWVGVPQYACESLCPPAVQALLVRIEELTGIAIPQAGLE EDKRDWVAAIDEALVDHPELAEYIAALETEQDAALSEGLTGDVLAVEFQSYLRHRGH >gi|302034487|gb|GL383264.1| GENE 396 395715 - 397352 1173 545 aa, chain + ## HITS:1 COG:MT2178 KEGG:ns NR:ns ## COG: MT2178 COG2519 # Protein_GI_number: 15841610 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA(1-methyladenosine) methyltransferase and related methyltransferases # Organism: Mycobacterium tuberculosis CDC1551 # 247 518 5 280 280 273 52.0 6e-73 MPSETHTATADRFFAAVLWDFDGTLVDTESRWVEAELAILASHGIVWEPEQANEFTGGPL TDVCEAMAADLGGSVTVDDVRCELITMVSQFNRERDVPWRPGVLDLLTEIREAGIPMGIV TGSAHAVVEPVLEAMAERIGNPFDTVVTFDDVIPETAKPAPDPYLLAAERLGVSITDCLA IEDSPKGATSATSAGAAVLTVTGLAKVGPGPRRVHRPDLSGLSLADVVSLWHLADEPAAP VANGGGGVLRAGERITLTDPKGRKHSIVLQPGGIFHTTKGAVRHDDLIGGPQGVVVTSVG GLDFLAMRPILSEFTVSMPREAAIIYPKEAAQITMWADIFPGARVLEAGVGSGGLSIPLL RAIGTKGCLHSYERRQEFADVARKNVESFYGEIPSTWDLKVSDLVSGISSEPIDRAILDM LAPWECVETVGKVLVPGGVLCCYVATTTQMGRVMDTLRAHGGWTEPSATETTTRDWHAEG LAIRPAHGTTGHTGFLVISRRLAPGVAAPMRKRRPAPGAYGPDYHGPRPRNITEHDQWRL PKEEK >gi|302034487|gb|GL383264.1| GENE 397 397427 - 397738 227 103 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4265 NR:ns ## KEGG: HMPREF0675_4265 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 103 27 129 129 134 100.0 9e-31 MGRASHGEVLSPGGLLRTGTPFVLGLVVGWVIVVTARVAALRWLAGVVLWVSTLIVGMVV RYFTGQGVAVIFVTVAASFLALTLVGWRAIAAAIRAMRRKEHP >gi|302034487|gb|GL383264.1| GENE 398 397813 - 399999 1636 728 aa, chain - ## HITS:1 COG:BS_yhgE KEGG:ns NR:ns ## COG: BS_yhgE COG1511 # Protein_GI_number: 16078080 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Bacillus subtilis # 24 694 21 756 775 221 24.0 4e-57 MLTRFIRLVQFEFRRFKGRSKLGLIFILIIPLLYGGIYLHANWDLYSNTNKVKIAVVNHD KPATFGGRTVNGGQEFQNSLKKNPRFDWQFLGTDENKAYQGLRDAEYFMIIEVPEDFSTN IVSAGDFRPARATLQLHRDDANGFIIGLLTSQVQTALEQALDQSVSETYFNALFVNLGVI KQSLSKASDGSAQIDNGLKTLDAGVTEMNNKVLGATKAVGDSTTTVNQVNSALANADSAA AKTSSAVTQTRVGAQAITGAAQNVMADSQAVNSAMVPLINNVTKNLPALQKQARNLVSVT GTLQNPNGDSVIKIQHDVTGVVNKATALAAKHPELAGDPDYIALVKQINGAASSTTTVSS NIAAVANVSAGLNLSLNQQNADTLANNATAALGRLNKDAQQVNNGLETINGAMDTADSVA KDLNKAVNDATDAGRSFTAKAPQIVSGVMQLSNGLGQLKTGSDNLSKGATQLHRGLDSGA KQIPGLSDDKRSNLANIMSSPVDIEQTILHSAKYYGRGLAPMFFSIAMWIACISTFLVVR TFSGRAMTGRANSLSIALVGFGPLAVIALAGAYIMAFGVWLILGLDPVHPWYFIGFVTLA SLSWMMLAFWMRLIFGSPQTAIFLILLVLQLPTCGGTFPVTMLPPVYQKLAVVMPMKYSV DAFRVLISGGPMSTLALGFAVEGGILVISMIITLVLVHRHKLFRMRDLHPPMITSTSTAD FAFSVRPR >gi|302034487|gb|GL383264.1| GENE 399 400003 - 400908 621 301 aa, chain - ## HITS:1 COG:SSO2838 KEGG:ns NR:ns ## COG: SSO2838 COG0410 # Protein_GI_number: 15899552 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport systems, ATPase component # Organism: Sulfolobus solfataricus # 27 207 7 183 236 60 27.0 5e-09 MRFSKRPSVDAQAVEDASGAVLYARDLNAQGRKGMIFGPLDMDLAPRQLAVIHGPAGAGK SALLLALCGRFRRTRGTLIIDGIDAMAEPYRAIQRTSVARIGDYVVPEDRLTLNESVAER CHLDAVNLKKAESRVRQIEEIVGFRIDRSCEFEQLEAIERAVASVALAMLRQTKVIVIDD ADVMVPHNQQKLLFEIFSRLTELDDSTIIAATVDDDMAPPGSLDVELPAHNRVHAVRDIH TNKDADGNSQDPEAPEVTRISLESKDNIRPDVPREIYSALDDISDNNSSTENDCPDDSPR R >gi|302034487|gb|GL383264.1| GENE 400 400908 - 401528 438 206 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4268 NR:ns ## KEGG: HMPREF0675_4268 # Name: not_defined # Def: transcriptional regulator, TetR family # Organism: P.acnes_SK137 # Pathway: not_defined # 1 206 2 207 207 348 99.0 1e-94 MPAAVERPHRDEVRSRILAAAAHNFERDGYVGASLRRIATDAGFTKGAVYSNFGSKPDLF GQVCAARLTNGERDLVDALSPILSSCERPDDLMRNISEKLTEILLEDAPWQVILAEFRAL ARRDAEIAKAYSKLQSQRIAQLAELMTQYGVLDHIESADAANPRSLAVVVLSLVNVLALE FSVASAVIDRQVITDVIERAIRGFLQ >gi|302034487|gb|GL383264.1| GENE 401 401675 - 402511 399 278 aa, chain + ## HITS:1 COG:ML1322 KEGG:ns NR:ns ## COG: ML1322 COG0638 # Protein_GI_number: 15827687 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: 20S proteasome, alpha and beta subunits # Organism: Mycobacterium leprae # 14 266 18 275 291 135 37.0 6e-32 MPLSLSDLDGDYLMSSTTTDSFAVLLRRVAPELLPPTTVDTSVPELLRHGRTVLAIRYNG GVVVAADLGSALARRLGQTDVDRILGTDDRCVIGVAGAAGLAGEMIRLFQAEVDHLEKIQ GQRISMDGCAVRLSSLVRSHGTMMAQGLAVTPLLAGWDELAHRGRIFSYDGTGGQTEEHS HACVGSGALFASDVLNEDYRTGMDRDESVALAIRALDTAISDDSPSSLSGPDLSRGLYPT VACVDSHGVTRMPTEEVAVLTKRLVDQVTAESDREEAQ >gi|302034487|gb|GL383264.1| GENE 402 402511 - 403188 511 225 aa, chain + ## HITS:1 COG:Rv2109c KEGG:ns NR:ns ## COG: Rv2109c COG0638 # Protein_GI_number: 15609246 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: 20S proteasome, alpha and beta subunits # Organism: Mycobacterium tuberculosis H37Rv # 1 217 1 230 248 105 34.0 8e-23 MTVPAYVPPSEWVTDRSTFVSDSIRNGGDGIVVARCANGIALLARQCGADLPKGMRSVSE IHDRLAFAAVGLFHEADELRVAGIRFADLRAYAYGRLDVTGRSLASMYARIIGKTFARID VKPYQVQVTVAELGLVPSEDRFYTIDFDGSVRAGTGPILMGATGENSLDLPNNAPVSEVV RAAAHVLDVEPANLEVGLLNRHASTRRHFRRLDAATVLEADGDGS >gi|302034487|gb|GL383264.1| GENE 403 403175 - 404272 618 365 aa, chain + ## HITS:1 COG:SA1197 KEGG:ns NR:ns ## COG: SA1197 COG0287 # Protein_GI_number: 15926945 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydrogenase # Organism: Staphylococcus aureus N315 # 15 329 4 327 363 116 28.0 6e-26 MTDPNRVEPTLTGPVLIVGVGLIGASIGKALMREGTDVHLWDIDRDNSLIAAGHGAGRLG NLADDAYRMIVIATPPAVVAQTVVERLTRHPQAVVTDTASVKGAVLAELTTLATEHEIDI SRYVGSHPMAGTQCTGPLTASTELFVDRTWVVAPRTDNRYDDVQQVVALARACGARVVSM DAHEHDRAVAEVSHLPHLMSILTAANLRRARPEHLSLAGPGIRDVTRIARSQTTMWRQIL SSNCVEVRSQLEAIRDDLDDLLSRLNDSERLEEFLSVGQAGARKVAGKHGHQMVETTAVV VEIPDTPGALARLFADVEAAGINIEDLSVEHNPARETGFLSIDVAPSRAEQLTASMRNHG WSVRS >gi|302034487|gb|GL383264.1| GENE 404 404335 - 405006 211 223 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15639271|ref|NP_218720.1| bifunctional cytidylate kinase/ribosomal protein S1 [Treponema pallidum subsp. pallidum str. Nichols] # 6 214 35 279 863 85 30 3e-15 MSTSPLVIAIDGPSGSGKSSTSRGVANRLGLARLDTGSMYRAVACRVAHLGIDPTTNPRD AIKVAQSCHLEIDTSAIDDRVVIDGEDVTKEIRDPQTSAKVSAVATIQPVRDALTARMRQ VAADRGRIVMEGRDITTVVCPDAQVRVLLVADPAIRVARRQAELGEKVDMAQVIDSIVRR DRDDSTVSTFEEPAEGVTVVDSTHLNLDQVIDAVIDLVPVTLR >gi|302034487|gb|GL383264.1| GENE 405 405071 - 406441 861 456 aa, chain + ## HITS:1 COG:MT1753 KEGG:ns NR:ns ## COG: MT1753 COG1160 # Protein_GI_number: 15841173 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Mycobacterium tuberculosis CDC1551 # 3 456 9 461 463 508 61.0 1e-144 MSDSPEFRNDPSDDIEEALPKPVVAVVGRPNVGKSTLVNRILGRRAAVVQDVPGVTRDRV SYDAEWSGRQFVLVDTGGWASDASGMAAMIAEQAELAISTADAVLFVVDANVGTTDEDEA VVQVLRQSRKPVVVAANKVDNARGESEAATMWNLGLGEPHPVSAMHGRGSGDLLDALIAV LPKEQASYESSDGPRRVAIVGKPNVGKSSLLNRIARQNRVVVSDISGTTVDPVDELVTVG GTVYQFIDTAGLRKRVKEASGHEYYASLRTQAAIERAEVCVVVIDASESISDQDLRILTM VENAGRAMVIAYNKWDLTDEERRRYLEREIERDVQAYSWAPRVNISALNGRNVDKLEKAI ETAAEGWEMRISTGKLNAFLGRLAAAHPHPVRGGKQPRILFGTQAHNCPPTFALFTSGVF DQGYVRFIIRRLREDFGFAGSPVHVEIRPRAKRQRK >gi|302034487|gb|GL383264.1| GENE 406 406679 - 407941 809 420 aa, chain + ## HITS:1 COG:no KEGG:Rxyl_1927 NR:ns ## KEGG: Rxyl_1927 # Name: not_defined # Def: phage integrase # Organism: R.xylanophilus # Pathway: not_defined # 21 387 19 375 379 98 28.0 7e-19 MYYRERSVRTYKDKTYIREYWTAESSFYDKNGTKQRVRGRGATRAEATKRLNKNLRQRID GTRTATGPRGGLTLNQWVNIWLATKQASEQMKPQTAQQHKIRYKQWIAPKLGSRPVKRLT AEEIQEVIAAGAQQGHAIPVNIFKTMNAALNSAVKAGEVDLNPMKQLTPPRQRSAAGEKD TAHIEYWSRIMDKMCKWLAQPECELHDRYTLTIAMLLGLRRAELLGLTWDCFDECMNKLT IKQQLMRQNDGSYIIQNSTKTGKNRTLMLPERWKEAFLLQRQKSLTAAAPEWNNLVFLTP AGGPITYSMYNKLWRNTIVTYMAKEGQEWKEEQHYWRPHTCRKMCASWLAWGGVDIQTAM SILGHSSEAMTLYYTIINADQQRKALEGLSNVYEHHNVYNADYEAEGNGTLTKLRSDSIR >gi|302034487|gb|GL383264.1| GENE 407 407884 - 408816 473 310 aa, chain - ## HITS:1 COG:no KEGG:Closa_0181 NR:ns ## KEGG: Closa_0181 # Name: not_defined # Def: Viral replication-associated protein # Organism: C.saccharolyticum # Pathway: not_defined # 47 297 59 307 336 90 27.0 7e-17 MMTTDRCRDWMLTLPEEYYSRDIVEDKLRSYDYIGQLESGKESGYRHFQIYVENKNAIKF ETLRSKFPRGHYEPRRESKSQCLKYCTKSDTRVPGHSLLAGGKFVGKDVDELLKDRLPRT KRDISAEISEKMLKENVPASTLIQDPRYAQFLKYIEALETIRLKNLGLEDRDALEVHYLY GPSRVGKTYKILHGLNYDLTDIYRVSNFKYPWDNYEGQSVLLLDEFAGQISFEFLLQVLD KYQLELNARYRNKWACWTQVWIVSNLPMESLPYYRRVSPEQWRALCMRFTSYQRMESDRS LVNVPFPSAS >gi|302034487|gb|GL383264.1| GENE 408 408988 - 410418 688 476 aa, chain - ## HITS:1 COG:YPO1376 KEGG:ns NR:ns ## COG: YPO1376 COG1674 # Protein_GI_number: 16121656 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Yersinia pestis # 142 444 871 1201 1305 85 27.0 2e-16 MSIIQEHFESKDVQARQEHPFMYLLGQAIGWVVRTIFSFIRWSWLSILWVCAAVLLMKAI SGFWGKFLAIAVLLVPIFIPQTRRFSFAVHDWQRFRAHRYEVRALENGNKFLRRMGLVHD DDTTYNVALYFGADECVLACHEMIPGLAPQRLIDSCKAFMTDLDAQSVRSENLGGGLFNI HFILNDPLDASTEITQPKPLDLTDMSVEIGKDAFGDPFRLKLKDTAGVLVGGVPGSGKSA FLNAALGSYALATDDVSMTVIDCKGGQDFSAYESRVDTFISEATDFTEVRDVLRNTVEEM NKRVKTNGAVLGESNFWNVAPSERRSKGVKMKLIVIDEAQALFDLSGITDKEEKKLRQEI TRACTDLVKRGRSAGVLTIFATQKPTADAIPTAIRDNVNVRIALRVTTSEAERAIMGYVP DELDVPRATSIPASRKGGAVIESEGGTRKMIRSYYFPEKKLRAFLAGHGEALAERC >gi|302034487|gb|GL383264.1| GENE 409 410478 - 410813 361 111 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313764264|gb|EFS35628.1| ## NR: gi|313764264|gb|EFS35628.1| hypothetical protein HMPREF9567_01108 [Propionibacterium acnes HL013PA1] hypothetical protein HMPREF9589_00948 [Propionibacterium acnes HL059PA1] hypothetical protein HMPREF9597_01231 [Propionibacterium acnes HL005PA4] hypothetical protein HMPREF9598_01453 [Propionibacterium acnes HL050PA1] hypothetical protein HMPREF9600_02108 [Propionibacterium acnes HL050PA3] hypothetical protein HMPREF9608_00969 [Propionibacterium acnes HL067PA1] hypothetical protein HMPREF9609_01430 [Propionibacterium acnes HL027PA1] hypothetical protein HMPREF9613_01802 [Propionibacterium acnes HL002PA1] hypothetical protein HMPREF9590_00945 [Propionibacterium acnes HL059PA2] hypothetical protein HMPREF9592_02058 [Propionibacterium acnes HL046PA1] hypothetical protein HMPREF9581_01917 [Propionibacterium acnes HL087PA3] hypothetical protein HMPREF9586_02035 [Propionibacterium acnes HL083PA2] hypothetical protein HMPREF9588_02231 [Propionibacterium acnes HL025PA2] hypothetical protein HMPREF9579_01670 [Propionibacterium acnes HL087PA1] # 1 111 1 111 111 214 100.0 1e-54 MKFRVDANEANKHMVIMSLAGMKADDYSPKQKDGKNVLSEDGKQLYSVRNVHAYDTDRQR EMQNTFIAVMEPAEIHPMARYVFDGDVWIKPYAMNGRLGMTIEATRLVSVK >gi|302034487|gb|GL383264.1| GENE 410 410775 - 411437 419 220 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|314915739|gb|EFS79570.1| ## NR: gi|314915739|gb|EFS79570.1| conserved domain protein [Propionibacterium acnes HL005PA4] conserved domain protein [Propionibacterium acnes HL059PA2] conserved domain protein [Propionibacterium acnes HL087PA3] conserved domain protein [Propionibacterium acnes HL083PA2] conserved domain protein [Propionibacterium acnes HL087PA1] # 54 220 1 167 167 292 99.0 1e-77 MLICFICIYPKLHLSHLSYFYTSRPSTSAINQYQKHLQKQLLVPPNTSLKQLPVTLCNKQ KSSNTFVNLWKLTETRRSFRKLHTVDELREFVDNNEISLIDYMISTIDEDVSTAAGRSRY VARGAEILSHVSDGVIFDNCVKLLALESLSSLSTVREAVGKVDETMKTSGNLDEITKVCR KCLLLHSPASSMMARSVKRKRQAPKKVPKKHSSQACNRFS >gi|302034487|gb|GL383264.1| GENE 411 411967 - 412881 701 304 aa, chain - ## HITS:1 COG:STM3793 KEGG:ns NR:ns ## COG: STM3793 COG0524 # Protein_GI_number: 16767077 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Salmonella typhimurium LT2 # 1 291 1 292 306 331 57.0 1e-90 MDIAVVGSNMVDLISYIHRMPSDGETVEAPEFRMGCGGKGANQAVAASRLGAEVVMVTRV GNDVFADTTLDNFRKNGIDTTHVLRTDASSGVAPIFVDPESRNSILIIKGANAQLSPADI EGARQDIATCKLIMLQLEIPLETVYATIELGDVLGIPILLNPAPVAPELDLERIRGIEFF MPNESELELITGMPVDTLDDIGKATDVLLGAGITNIIVTLGSRGAMWAHAEGRKIIKAPV VQAVDTTGAGDAFIGCFAKEWVDHGDVIAAIRAGNRYAADSVTRHGTQSSYALADGSLPE WLRS >gi|302034487|gb|GL383264.1| GENE 412 412883 - 413956 502 357 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4277 NR:ns ## KEGG: HMPREF0675_4277 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 357 1 357 357 736 99.0 0 MPTTDLEIILYPELFDERRRDVLRTGEWIVTAWRYSTGIAALRISNSRGYIEALPFMGQI LWDAVFDGQSLRMDNMFDMPVPARQIVETYGCFAFHSGLLAAGCPSPEDDHPLHGEFPCA PMRSASLVTRHEPCGVTAVTLSSEYEYRIGFGHHYFARPTVTLRAGSAIFDIGLEVTNLS KYQSMPLQYICHMNYAFIPEARMSQSLPDGAFQLRRSVPNHVAPTRQWLRINEDILAGKI DADSLVGAEAFDPEIVYVADDLPQYGKTAEFRMQARAHHNFVTRFRTDQFPVATRWILHN ADQRVAAYVLPGTSRPEGRLAAEAAGTLIHLDAGATRTFSVTTGLLAQGEAFDRKAQ >gi|302034487|gb|GL383264.1| GENE 413 413943 - 415376 1046 477 aa, chain - ## HITS:1 COG:STM3792 KEGG:ns NR:ns ## COG: STM3792 COG0738 # Protein_GI_number: 16767076 # Func_class: G Carbohydrate transport and metabolism # Function: Fucose permease # Organism: Salmonella typhimurium LT2 # 31 450 7 422 438 416 53.0 1e-116 MITKDTTVVNDTDVDRGIPNVSWGLIKDHTLQLRDGYLNRTPFFQFILLSICFPMWGMAV SMNDILITQFKAVFALSDLASAFVQSAFYCGYFLIAIPASRVIRRTSYKTGLLIGLSVYI LGCLLFFPASRVATYTVFLAALFSIAVGLSFLETSANTYSSMIGDRKHATLRLNISQTFT SLGFLGGALMGKFLVFTDGAALHERVAHAHTVAEREAITAEALGRTLDPYRIIIIMLIVL VVLIAITQYPHSKPLRNDAEEAKAPIGETLAYLAKNRLFRAGIFTQFLYVGLQTSLWTFT IRLALNLDPALNERTAANYLIAAFISFFLGKTIANLLMTRMSENGILMAYSLLGVLCITY IVVVPSFTTVYAAVIASALLGPGWATIFARNLDLIEDKRYTETGGAIIIMSIIGGAAIPV VQGFLSDTTGSMRLSFIVNAFCFTAIFVFFLVVDRRDQKQICDIAPAALKEAPHANH >gi|302034487|gb|GL383264.1| GENE 414 415373 - 416026 480 217 aa, chain - ## HITS:1 COG:lin2103 KEGG:ns NR:ns ## COG: lin2103 COG0274 # Protein_GI_number: 16801169 # Func_class: F Nucleotide transport and metabolism # Function: Deoxyribose-phosphate aldolase # Organism: Listeria innocua # 1 215 1 216 223 228 59.0 7e-60 MSIAALIDHTLLAPDVTAQHIRTLCREAVDHGFATVCVSPTRVRLAADELAGHAPRVCSV IGFPSGAHLSEIRAAETKAAVNDGADEIDMVINVGAVKDDDWDTVESDISAVVDAAGMAI VKVILEVSELTDEEITRACQAAERCGADFVKTSTGYSRHGATAEAVSLMRRTVGDRLGVK ASGGIRTHNDVATMLRAGATRIGASAGVALLVDEEAL >gi|302034487|gb|GL383264.1| GENE 415 416128 - 417039 424 303 aa, chain - ## HITS:1 COG:lin2104 KEGG:ns NR:ns ## COG: lin2104 COG2390 # Protein_GI_number: 16801170 # Func_class: K Transcription # Function: Transcriptional regulator, contains sigma factor-related N-terminal domain # Organism: Listeria innocua # 2 301 8 310 315 103 23.0 6e-22 MMALDAARLYHLRGLDQAAVAQVLHVSRPQVSKLLATARELGYIRTHVVDPRESDRELVQ TLTQHFRIAGLLLVSPSGPTTGDLLHALGAGAAHLTSNLVLPGEEDASFWWSRTVQACAL EMACAPLRPRALYQCAGTAPGHDIHLSMRTFMERTDVEVHPCPVPLLHPSVTARLTAEES PEARQHESRRASSAVLILGSSRQDMDLICRSDLVTSQEREQIRRNAVGHLCGRFIDADGR VVAPTLGQRTSSPTLAQLRRSRRTVLITHGAHQVEFVRAATLRGYVDHIVTDVSTAELLL KYA >gi|302034487|gb|GL383264.1| GENE 416 417255 - 418103 566 282 aa, chain + ## HITS:1 COG:Cgl0894 KEGG:ns NR:ns ## COG: Cgl0894 COG0561 # Protein_GI_number: 19552144 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Corynebacterium glutamicum # 13 275 15 275 277 214 43.0 1e-55 MPNPTPFPAPADDLRLVVSDMDGTLLDGDGNIPSQLWPLLETMRDRAIAFVPASGRQCTT LSTMFGSHLQGMPIIAENGTYVVRDGVDISSSTIDPNLTREVITGVRQLRNDGHDVGLVV ATKSIAYLERGDDPFVSHVATYYHSHRIVKDLSEHTDDVIKLSIYDFREASEATYPTMQR TAPEHQVILATPNWVDIMNPGVNKGSAVEAVQRDLGVTADQTAIFGDFLNDLEMMPMAKW SFAMANGHPNIVKASNYVAPPNTENGVITVLAALLGTRVPIT >gi|302034487|gb|GL383264.1| GENE 417 418114 - 419331 609 405 aa, chain - ## HITS:1 COG:slr1888_1 KEGG:ns NR:ns ## COG: slr1888_1 COG0427 # Protein_GI_number: 16330298 # Func_class: C Energy production and conversion # Function: Acetyl-CoA hydrolase # Organism: Synechocystis # 27 405 59 445 478 216 36.0 7e-56 MINLADLERVLKGVTGRPRVVCAGSGATPLPLLDAVDRCLETWRFACVNAPVGVPTRKGV IHQTVFIGPGSRHAENLEYVPCRLSLAPRLYEDRFAPDILLLHTSTPHNGAVSMGIEVQV LPAALESAKRRGALVIAQVNPSMPYVFGDGIVDVDDIDIGVIVDTPLPTAAMPSPGPTAW RIGELVASRVPDGATLQVGIGAVPDAVVAMLPDDRAFGVWTELLTDSIRLLEEAHSLDDR LLTGTFAMGTPALYEWLDENPRVQLLRCEKTNNPSFIATQPKMASINAALQVDLFGQVNA TRLRGKIHSGIGGSTDFLVGSMHSPGGQALIAMLSWHPKADCSTIVGLLGSPASATQPSV VITEQGIADLFGKSQEEQARQLIDNAAHPNAREKLWREAKELSLV >gi|302034487|gb|GL383264.1| GENE 418 419438 - 419626 151 62 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313807717|gb|EFS46204.1| ## NR: gi|313807717|gb|EFS46204.1| hypothetical protein HMPREF9580_01546 [Propionibacterium acnes HL087PA2] hypothetical protein HMPREF9593_01439 [Propionibacterium acnes HL046PA2] hypothetical protein HMPREF9604_02150 [Propionibacterium acnes HL036PA1] hypothetical protein HMPREF9605_01772 [Propionibacterium acnes HL036PA2] hypothetical protein HMPREF9611_02134 [Propionibacterium acnes HL063PA1] hypothetical protein HMPREF9606_02126 [Propionibacterium acnes HL036PA3] hypothetical protein HMPREF9614_01877 [Propionibacterium acnes HL002PA2] hypothetical protein HMPREF9573_02019 [Propionibacterium acnes HL072PA2] hypothetical protein HMPREF9595_00387 [Propionibacterium acnes HL005PA2] hypothetical protein HMPREF9596_00998 [Propionibacterium acnes HL005PA3] hypothetical protein HMPREF9610_00387 [Propionibacterium acnes HL027PA2] hypothetical protein HMPREF9615_01743 [Propionibacterium acnes HL002PA3] hypothetical protein HMPREF9572_01348 [Propionibacterium acnes HL072PA1] putative polyhydroxyalkanoate synthase [Propionibacterium acnes HL096PA3] hypothetical protein HMPREF9568_02058 [Propionibacterium acnes HL013PA2] hypothetical protein HMPREF9563_01608 [Propionibacterium acnes HL020PA1] # 1 62 29 90 90 113 100.0 4e-24 MGITSKRMTGIDRIVAGRIELPVGFVSDSDVIETPICNQMKRVVRYRDSCVLSLDGTDTG TL >gi|302034487|gb|GL383264.1| GENE 419 420011 - 420634 306 207 aa, chain + ## HITS:1 COG:NMB0939 KEGG:ns NR:ns ## COG: NMB0939 COG0500 # Protein_GI_number: 15676832 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Neisseria meningitidis MC58 # 12 186 14 185 193 118 36.0 6e-27 MILRPGIVASLVPSYSRVLDLGCDDGLLLRHFITTRDCLGTGIELDHPSLVTAMSARVLA LGLDLNEDLGEFHDDSYDVVILSQILQAVVCPDVVRAEMARIGTVLILLVLNVVYWRSRL KIIGEKIPIPHDLPYPWHDTLSQSYAGVADFEEWFASFNLKVVNRVCLDGRGRPSRVASA APNLLAGSTIRVLKSHWVEPGTGRNHS >gi|302034487|gb|GL383264.1| GENE 420 420631 - 421122 393 163 aa, chain + ## HITS:1 COG:MT3390 KEGG:ns NR:ns ## COG: MT3390 COG1522 # Protein_GI_number: 15842882 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Mycobacterium tuberculosis CDC1551 # 16 156 5 145 150 110 39.0 2e-24 MTKHHDEEDEDRSPILEATDRHILALLEKDGRMSWTELGHQTGLSTSAAQQRVKRLEAKG IITGYHATLNLEAIGAGITAFIFLNPIDPEEDETIPGILRTFPEVRGCHSIAGAASYLAR VQAPSAGHLDQLLTRIRKECLCGTETVVVLDTMFDDLGMLGTR >gi|302034487|gb|GL383264.1| GENE 421 421119 - 422708 674 529 aa, chain + ## HITS:1 COG:Cgl1445 KEGG:ns NR:ns ## COG: Cgl1445 COG0815 # Protein_GI_number: 19552695 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Apolipoprotein N-acyltransferase # Organism: Corynebacterium glutamicum # 58 516 77 522 545 170 29.0 6e-42 MISRLRRTSWLRGTAAVAAGAATGTGFQPLNWWILVIPGLAALILLVRNASGRAAAGLGY LFGIGLLTTTISWVGVMGPPVAILLIAVMALWCLLAGWTIRCVSVLPGTPVWQAMVWTAT EIGAATIPLGGFGWVRLAWTVVDTPWVGVLRWAGSIGTSFLVALASGLLVYVVSARGGSQ RRASIVFVAELLVVALAGTMCVTVVSRDISHQRSVRTLVVQGGVDGTAGPYAMGYARSVT DNHLSQTIMALAEQRTSGGPAPDMVLWPENSTDIDPVLDFESHQIVIGALTLSNRPTLVG AVTDGPGHNERQTTSMWWPPSSPQPTSTYHKRNLVPFGEWIPARSFFLPLIPILGKIGRQ SVPGTTPGVVDATIAGRRVPVGVVVCFEVAYDSTVADTVRHGAKILAVQSNNSSFIDTAQ TPQQWQITRARAVETGRHIVVSTTNSFSGLVNPDGSVALRTEEGVHTHFTVTIPLESGLT IGVQIAPWLRIIVLVMTAGAIAMSLLQRRRAMLAQANHNRSERNVRHRH >gi|302034487|gb|GL383264.1| GENE 422 422689 - 423507 690 272 aa, chain + ## HITS:1 COG:Cgl1444 KEGG:ns NR:ns ## COG: Cgl1444 COG0463 # Protein_GI_number: 19552694 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Corynebacterium glutamicum # 14 251 11 249 270 271 55.0 9e-73 MSATDTEVRLDKVLVIIPTYNEVENVETIVARTRRANPNVDVLVADDNSPDGTGEIADRI ASADDHVHVMHRKGKEGLGAAYLAGFHWGLDHGYDALVEMDADGSHQPEQLPLLLKALKQ ADMVKGSRYVKGGSVVNWPKYRELISRGGGLWTRMCLGIGVKDPTGGFNAFRANTLRAIG LDDVASAGYCFQLDLTWRTLKKGMTVAEVPIEFIEREYGSSKMSKNIVVEALLRTTMWGF DYRSHQLKDLSHVALDRAEKIAGDIKERRSRH >gi|302034487|gb|GL383264.1| GENE 423 423562 - 423894 305 110 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4287 NR:ns ## KEGG: HMPREF0675_4287 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 110 1 110 110 176 100.0 4e-43 MADRALRGMGLGSKSFEDEEGVEMAERQQIGFDCQNGHHFELTFSTEAELPSLWECPRCG AEALRSDGTDPQRKKQKPQRTHWDMLTERRSIPELEELLAERLDEIRKEN >gi|302034487|gb|GL383264.1| GENE 424 424056 - 424781 500 241 aa, chain - ## HITS:1 COG:Rv0317c KEGG:ns NR:ns ## COG: Rv0317c COG0584 # Protein_GI_number: 15607458 # Func_class: C Energy production and conversion # Function: Glycerophosphoryl diester phosphodiesterase # Organism: Mycobacterium tuberculosis H37Rv # 9 223 25 243 256 139 38.0 6e-33 MAVNKGIENTLAAFGHAVEVGCTYLETDVHATSDGVLVAFHDPILDRVTESGGVIAAMPW HKVKQAKVGGEPIPTLDEIFDAFPEAFINIDIKHDGATMPLIDVLSRHRAWSRVCVGSFS SKRIQTFRRLVQGRTATAVGPVGVGWAVIGPHSMQMAQSHGNAYQVPHRLTRYGVPLVTP TFIKAAHRQGRAVHVWTVNEISEARELMDMGVDGIVTDRPDLMCEFARVHQPKEAPTLIP R >gi|302034487|gb|GL383264.1| GENE 425 424847 - 425092 186 81 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|315105862|gb|EFT77838.1| ## NR: gi|315105862|gb|EFT77838.1| conserved domain protein [Propionibacterium acnes HL030PA1] # 1 81 1 81 81 142 100.0 7e-33 MASICSESIGIPATLERPLWFDNSAVGIPQARTPIARITGTAMLLPTVPWTTWDCSDKTV TLTLGHGSHSSDTSPEHNGLL >gi|302034487|gb|GL383264.1| GENE 426 424980 - 425783 375 267 aa, chain + ## HITS:1 COG:YPO2368 KEGG:ns NR:ns ## COG: YPO2368 COG2240 # Protein_GI_number: 16122591 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxal/pyridoxine/pyridoxamine kinase # Organism: Yersinia pestis # 1 230 25 257 286 112 34.0 7e-25 MRAMGVRAWGMPTALLSNHNGRSSVAGIPIDSEQIDAMVNALDSNGELKHVDAVLSGYLT PRTGPAVLRTVERCRAVHPDTIWVCDPVMGDMTPDGELRAYVPDETVSLMTDAVQHADVV VPNLAELGILTGTEPRTLDDIVRAARSLTGPHLVIVTSVPYHDDGGDGIAMVGVTGEGAV LTHGPLFDRYFNGAGDLTSAVLTAGLVKGEPLDATLGKAAGVVHTVLERTVAHPGDELDW WPEDAAAQPWKTVILAPNAPSRVGRSS >gi|302034487|gb|GL383264.1| GENE 427 425720 - 427246 1279 508 aa, chain - ## HITS:1 COG:TP0029 KEGG:ns NR:ns ## COG: TP0029 COG0766 # Protein_GI_number: 15639023 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine enolpyruvyl transferase # Organism: Treponema pallidum # 75 503 4 421 425 193 32.0 6e-49 MDNITPASVGRLIRDARKQHGMTQNQLAEILKTSQSAIHRVESGTQNLSLEYINRIAEAL ESPIITQPGSGTMNYRIEGGHQLSGSIEVRSSKNAAVALLCACLINRGRTVLRGIAHIEE VNRILEVLTSIGVTYEWSDDEHDLTLIRPAELNLDDMDIEAARRTRSVIMFLGPLMRFYD TFKLPYAGGCNLGARTVEPHLQVLRAFGLDVVATEGFYQCHVTDHTVKERHIVLTERGDT VTENALLAAAQTPGVTVLRNASSNYMVQDLCVFLCQLGVQIEGIGTTTLRIRGVEEIDVD VEYAPSEDPIEAMSLLTAAVVTKSELTITRCPIEFLEIELAILSEMGLDFDLSPEYVSRN GFTRLVDVTVRPSKLRAVADKIHPMPFPGLNIDNLPFFAVIAAEAEGQTLIHDWCYENRA IHLLDLGKLGADVQLLDPHRLIVRGPTRWRGRELICPPALRPAVCLLLAALAASGETTLR DVYMINRGYEDLPTRLGALGAKITVFHG >gi|302034487|gb|GL383264.1| GENE 428 427080 - 427385 79 101 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|282853816|ref|ZP_06263153.1| ## NR: gi|282853816|ref|ZP_06263153.1| hypothetical protein HMPREF9206_1749 [Propionibacterium acnes J139] hypothetical protein HMPREF9206_1749 [Propionibacterium acnes J139] hypothetical protein HMPREF9574_01669 [Propionibacterium acnes HL074PA1] hypothetical protein HMPREF9585_02391 [Propionibacterium acnes HL083PA1] hypothetical protein HMPREF9611_02143 [Propionibacterium acnes HL063PA1] hypothetical protein HMPREF9612_02435 [Propionibacterium acnes HL063PA2] hypothetical protein HMPREF9591_02044 [Propionibacterium acnes HL086PA1] hypothetical protein HMPREF9600_02127 [Propionibacterium acnes HL050PA3] hypothetical protein HMPREF9606_02135 [Propionibacterium acnes HL036PA3] hypothetical protein HMPREF9608_00988 [Propionibacterium acnes HL067PA1] hypothetical protein HMPREF9609_01449 [Propionibacterium acnes HL027PA1] hypothetical protein HMPREF9613_01821 [Propionibacterium acnes HL002PA1] hypothetical protein HMPREF9619_00508 [Propionibacterium acnes HL082PA2] hypothetical protein HMPREF9620_02382 [Propionibacterium acnes HL037PA1] hypothetical protein HMPREF9566_02272 [Propionibacterium acnes HL045PA1] hypothetical protein HMPREF9595_00378 [Propionibacterium acnes HL005PA2] hypothetical protein HMPREF9565_01698 [Propionibacterium acnes HL053PA2] hypothetical protein HMPREF9615_01734 [Propionibacterium acnes HL002PA3] hypothetical protein HMPREF9572_01357 [Propionibacterium acnes HL072PA1] hypothetical protein HMPREF9599_00785 [Propionibacterium acnes HL050PA2] hypothetical protein HMPREF9602_01525 [Propionibacterium acnes HL030PA2] hypothetical protein HMPREF9568_02049 [Propionibacterium acnes HL013PA2] hypothetical protein HMPREF9571_01449 [Propionibacterium acnes HL043PA2] hypothetical protein HMPREF9343_01374 [Propionibacterium acnes HL099PA1] # 53 101 1 49 49 87 100.0 2e-16 MRLMYSRERFCVPDSTRWIALWEVFRISANWFCVIPCCLRASRIRRPTEAGVMLSTADPF DDNSFPDQDISDLSSSPREERVEQASRDLFSEIFVTDRCSH >gi|302034487|gb|GL383264.1| GENE 429 427396 - 428799 989 467 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 3 466 2 457 458 385 44 1e-105 MSSHFDVVVLGAGPGGYVAAIRAAQLGKKTAIIEKEYWGGVCLNVGCIPTKSLLRNAELA HIVTKEAKTFGIGGDITVDFGKAFSRSREVSARMVKGIHFLMKKNKITEFNGWGEFTGPK AISVKDSDGKVTDEITFDNAIIAVGSVVKTLPGTQLSGRVVTYKEQILSDTVPGSIVIAG SGAIGTEFAYVLANYGCDVTIVEFLDRMVPNEDKEVSAELAKAYKKLGIKVLTSTKVDSI DDFGDKVKVTISPSKGGESKVIEADRVLQAVGFAPRVEGYGLEKTGVKLTERGAIEIDDF MRTNVDGIYAIGDCTAKLMLAHTAEAQGVVAAETIAGAQTMPINYDMIPRATYCQPQVGS FGYSEDQAREKGYDVKVSKFPFAANGKAWGLGDGTGFVKIVADARHGELLGASLVGHDVS ELLPELTLAQLWDITAEEIGRNIHAHPSLSEALKDAAEGVEGHMINF >gi|302034487|gb|GL383264.1| GENE 430 428893 - 429717 507 274 aa, chain - ## HITS:1 COG:lin2720 KEGG:ns NR:ns ## COG: lin2720 COG1230 # Protein_GI_number: 16801781 # Func_class: P Inorganic ion transport and metabolism # Function: Co/Zn/Cd efflux system component # Organism: Listeria innocua # 1 262 35 293 303 199 39.0 6e-51 MITEIITAVISGSLALLSDAGHMLSDIGAIAIALWAARLTRRRPQGSWTWGWKRAEIMSA AVNGVTLLVVAILVGIEAVRRLVTPPAVGGGLVMVIAAVGVVVNVAVAWLVARANRRSLN VEGAYQHILTDLFGFIGTLVAGLVIVTTGWTRADAIASLIICGLMLRAAWSLLSQTGRIL MEVAPASLDLDEVRHHLMDLDHVRSVHDLHAWTVSSDLPALSAHIVVEDSCFADGHAPIL LAQIQQCLSGHFDLDHSTLQLEPPRHAGTENQTM >gi|302034487|gb|GL383264.1| GENE 431 429801 - 430220 249 139 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4292 NR:ns ## KEGG: HMPREF0675_4292 # Name: not_defined # Def: transcriptional regulator, ArsR family # Organism: P.acnes_SK137 # Pathway: not_defined # 1 139 1 139 139 258 100.0 7e-68 MAIDTVDEPDVELGDLTRLAAVFKSLGDPHRLVIVQHLFRGEHRVTDLVAHLGLAQSTVS SHVATLRDAGLLASHAHGRAMYYTLAHPQQIRRLMLLADILIRDGGECAELCGMLDVEYR GEPSDDHIGGNDDAVREEY >gi|302034487|gb|GL383264.1| GENE 432 430435 - 431169 329 244 aa, chain - ## HITS:1 COG:no KEGG:PPA1230 NR:ns ## KEGG: PPA1230 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 244 1 244 244 448 100.0 1e-125 MVNDYLVRRSFNVLYIWIDAILLLAFLCILARTRRRAALVVGLLGGVAYLVVDYGFFYAL LGTRTVVGMSVLPLEIWLSFSYGITNMAWMWLWFDEPGNRWEWSILFPAGWLTSALVSQG FGGMFHSVQIARHVSSYHGIMVAFALVGYGWLAMHNLRHPDERYSIRSALIIGIGIQFTW EAVLMISGIRPLTWHPLVIDSLIETNLGAPFMLLIVKAWRARHPKEFLALPVRARPPVAQ RESI >gi|302034487|gb|GL383264.1| GENE 433 431337 - 432092 774 251 aa, chain - ## HITS:1 COG:no KEGG:PPA1231 NR:ns ## KEGG: PPA1231 # Name: not_defined # Def: cAMP factor # Organism: P.acnes # Pathway: not_defined # 20 251 36 267 267 347 100.0 3e-94 MPAALPATAAQASAPAPAAVSTVNKTALTTDQIKAERSALNSRINMLQETQKAIPGSQYA DQIEDLIKTALDLSGAIDTIAHGGVPAYDPATIVPRIHLAIDAADAIKTGNTTLQHKVKK AHVELGLEIAKASIVAINPASSVAQVQDEIKALKARIDKVSAYPDLSKDDTATIAYKQTL RKTIHEVRVGRNKNIVGKKDQAVVDTLNKEISKADKVRANAKSTVAQVDTAVDQLRAAYQ TALNAPDKAKK >gi|302034487|gb|GL383264.1| GENE 434 432410 - 432838 192 142 aa, chain - ## HITS:1 COG:CC1214 KEGG:ns NR:ns ## COG: CC1214 COG1186 # Protein_GI_number: 16125464 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor B # Organism: Caulobacter vibrioides # 7 139 5 138 143 80 38.0 1e-15 MVKVGDIEVVPGFIIAETDLRERFSHSSGPGGQGVNTTDSRVELMFDVARSGAVPDRLRP VIMSVLKNRLVDGVLTVTVHDERSQLANRKLARARLVGLLQTACTQPRRRRATRRTRGSQ RRRLDAKKRRGELKRNRQRPTW >gi|302034487|gb|GL383264.1| GENE 435 433016 - 434212 953 398 aa, chain - ## HITS:1 COG:BS_yfmO KEGG:ns NR:ns ## COG: BS_yfmO COG0477 # Protein_GI_number: 16077807 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Bacillus subtilis # 9 385 19 387 396 258 42.0 1e-68 MSKEPVRPAVWAVTIAVAFSYMGVGVVDPILPEISSALKASPGQTELLFSTYLFVSAALM FFASWVATRIGRKKTLLVGLAIIVTFAAACALSGHVDLIIGFRGGWGVGNALFVSTALAT VLGASAEPRRAIMLYEGALGAGMALGPLVGGALGSISWRGPFLGTAVLMAVGLIAIVLFV PPTPIERSARRSAIEPFRALVDSRVSILMLAALVYNYGYFTLLAYAPFPVAEASIRAGGQ FTPLDLGLVFFGWGLMVALGSVWLGPRGCEHVGIRRTVAVTLILFTIDEIVLATWISPIP QVIGVVLGGLLIGIINTAMTEIVMSASDIQREVASSAYSGVRFLGGACAPTLAGALSSMW GIGGPYYIGAVALVLTIILLWIDRQRRMQMTAHSVALG >gi|302034487|gb|GL383264.1| GENE 436 434768 - 435040 99 90 aa, chain + ## HITS:1 COG:no KEGG:PPA1234 NR:ns ## KEGG: PPA1234 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 90 100 189 189 154 100.0 1e-36 MNAHKHDAYSISIEGLRASQLPESTSMEEQTTTITTIELALDLVFVATNAHLRHQRLSDG NPRRHSCDEPTPPHETFRPRATQHDRIIKK >gi|302034487|gb|GL383264.1| GENE 437 435346 - 435879 317 177 aa, chain + ## HITS:1 COG:MT1297.1 KEGG:ns NR:ns ## COG: MT1297.1 COG1573 # Protein_GI_number: 15840705 # Func_class: L Replication, recombination and repair # Function: Uracil-DNA glycosylase # Organism: Mycobacterium tuberculosis CDC1551 # 1 175 98 265 268 156 51.0 2e-38 MVIIGLAPAAHGANRTGRMFTGDQSGDWLYRALYDADIASQAQSIDAADGLTLHDCRIIA PVHCAPPDNWPRPDEKRTCAIWFDDELARLTALRAVMCLGQIAWTSTLAAARRLGWQVPR PAPRFGHGTRTQLVRPDGSIIVVLGCYHVSRQNTNTGRLTRSMLDDAVNTLRDLATT >gi|302034487|gb|GL383264.1| GENE 438 436042 - 436707 455 221 aa, chain + ## HITS:1 COG:ML1149 KEGG:ns NR:ns ## COG: ML1149 COG2096 # Protein_GI_number: 15827580 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mycobacterium leprae # 4 207 5 191 191 182 49.0 4e-46 MVILSKIYTRTGDHGSTRLVDNSVTAKSDLRVEAYGLIDQANASIGLAIALDTTTKVLSR EVREALGIIQNELFDVGADLANPLVANPKWEPLRTVQESVDRLERWCDEFGDQLPTLRSF ILPGGNPVGAQLHVCRTAIRTAERAAWRAAEIYGTETSNDPETTPGGVNELAITYLNRLS DLLFILSRAANKAGEDSSDEVVWVPGGERNPSTQMTNDGQE >gi|302034487|gb|GL383264.1| GENE 439 436708 - 437220 332 170 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4301 NR:ns ## KEGG: HMPREF0675_4301 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 3 170 1 168 168 320 99.0 1e-86 MHVSIAQLGSTQMLSTLAMDAVIVGLIVCCAVLYMMWLLIRHRVLMRRRGAFLCGLRVMG GPKPGGWMIGSARYADGAFEWYRAIDPRHVPTIVLRRGGLAMREHHPPVVEDALALASNA YEIVTLETGHRGRSSVCQIVVDPRVVTGLMSWLEAAPPGGVEYATEGHLV >gi|302034487|gb|GL383264.1| GENE 440 437334 - 437774 409 146 aa, chain - ## HITS:1 COG:HI0478 KEGG:ns NR:ns ## COG: HI0478 COG0355 # Protein_GI_number: 16272425 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) # Organism: Haemophilus influenzae # 6 96 4 93 142 60 34.0 1e-09 MDHPPLQVKVVSADREVWKGESVNIIVRTTEGDIGLLPGHEAFLAALAPCAAQIITTDGN REVIACDGGFVALDNDGQVSIITQYATRSEEISVDQARRDRDSLRKKLNEHERSEQDPEV VQDLTHRLHLAQAQIAAARLAGKQRS >gi|302034487|gb|GL383264.1| GENE 441 437780 - 439234 1494 484 aa, chain - ## HITS:1 COG:Cgl1185 KEGG:ns NR:ns ## COG: Cgl1185 COG0055 # Protein_GI_number: 19552435 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, beta subunit # Organism: Corynebacterium glutamicum # 4 480 3 480 483 660 70.0 0 MTATTITPETKDEVVGVGRVVRVIGPVVDVEFPAGQLPEILNALHVDAEVMGETHTITLE VALHIGENVVRAISLKPTDGMRRGTEVRDTGAPISVPVGDVTKGHVWNVTGDVLNADPST IEVTERWPIHRDPPAFDDLEPETEMLETGIKVLDLLTPYVKGGKIGLFGGAGVGKTVLIQ EMIYRIAHNFGGTSVFAGVGERTREGNDLINEMDEAGVLKDTALVFGQMDEPPGTRLRIA LTGLTMAEYFRDVQNQDVLLFIDNIFRFSQAGSEVSTLLGRMPSAVGYQPNLADEMGQLQ ERITSTRGHSITSMQAVYVPADDYTDPAPATTFAHLDATTELSREIASRGLYPAVDPLTS TSRILDPLYVGQEHYDTATQVKQILQRNKELQDIIAILGVDELSEEDKVTVARARRIQQF LSQNTYTAEKFTGVAGSTVPIADTVEGFQMICRGDVDHIPEQAFFNVGSMDMVMENWDKM KKEG >gi|302034487|gb|GL383264.1| GENE 442 439246 - 440118 683 290 aa, chain - ## HITS:1 COG:MT1349 KEGG:ns NR:ns ## COG: MT1349 COG0224 # Protein_GI_number: 15840760 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, gamma subunit # Organism: Mycobacterium tuberculosis CDC1551 # 2 286 26 304 305 234 47.0 1e-61 MELIASSRIIKAQNTVKAAGPYSLELTRALSAVAAHTHEEHPLTSMNPDPKRSAVLVITS DRGLAGAYSSNVIRTAEELTTALQPKQEIATYLCGRKAVQYFEFRGRKVDHLWSGFSDSP SYRDAKDIADHLIEDFLRPTEEGGVDEIHMVYTEFESMLTQTPKVIRLLPLAVVDPQDTP EGQLAEGDPGVGANAEEIFHEYRFEPNPVSVLDELLPLYVANRVHYALLQSAASELASRQ RAMKAATDNAEQLIQTLTRQANQARQAAITQEITEIVGGAAALAESAPQE >gi|302034487|gb|GL383264.1| GENE 443 440194 - 441831 1559 545 aa, chain - ## HITS:1 COG:ML1143 KEGG:ns NR:ns ## COG: ML1143 COG0056 # Protein_GI_number: 15827574 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, alpha subunit # Organism: Mycobacterium leprae # 1 539 1 538 558 704 65.0 0 MAELTIRPEEIRDALDNFVQNYEPETAVREEVGTVVTSGDGIAHVEGLPSAMANELLRFE NGTMGIALNLEERQIGVVVLGDSDGIDEGSTVRGTGEVLSVPVGEGYLGRVVDAMGNPVD GLGEIKGVEGRRALEIQAAGVMDRQEVREPLQTGLKAIDSMIPIGRGQRQLIIGDRKTGK TAIAIDTIINQKGNWESGDPQKQVRCIYVAIGQKGSTVAEVKGALEKAGAMEYTTIVHAP ASDPAGFKYIAPYAGSAIGQHWMYQGKHVLIIFDDLTKQAEAYRAMSLLLRRPPGREAYP GDVFYLHSRLLERCAKLSDDLGGGSMTGLPIIETKANDVSAFIPTNVISITDGQIFLQSD LFNANQRPAVDVGISVSRVGGAAQIKAMKSVAGTLKISLAQYRDMQAFAMFASDLDDTSR RQLDRGARLMELLKQGQFSPYPVEEQVISVWGGTTGKFDDVPVGDVLRFEGDVLEYLRSH SNVLTTIRETGKFDDEAKDAAAAAFEEVKKGFKTSDGKMLAGHEEFSPMADEDIDQAKIV RAKKG >gi|302034487|gb|GL383264.1| GENE 444 441885 - 442676 365 263 aa, chain - ## HITS:1 COG:Cgl1182 KEGG:ns NR:ns ## COG: Cgl1182 COG0712 # Protein_GI_number: 19552432 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) # Organism: Corynebacterium glutamicum # 25 259 33 267 271 119 34.0 6e-27 MTTAVGASQQLDEVGDRRGTGTEFANEIFAVVDVLNRESGLRRAVSDTGSETKARQGLID AVFTSKVSPDCKELLDATTTCKWRSPAALTRALERQGVRAVLRGARQADRFEAVADELFH VSRLVRGQAALQVALGDPNRSVADRQELLMKLVGGQVSEETLVLARRAVVASDSTFEQVI DGYLHVAAEMADRRRAIVTTAKALTDAQRAEMVKQLERITGSPIELSEVVDPTVLGGALI NLGDEVIDSTVAHRLDQARRELG >gi|302034487|gb|GL383264.1| GENE 445 442673 - 443227 440 184 aa, chain - ## HITS:1 COG:Cgl1181 KEGG:ns NR:ns ## COG: Cgl1181 COG0711 # Protein_GI_number: 19552431 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit b # Organism: Corynebacterium glutamicum # 2 169 7 180 188 104 43.0 9e-23 MNILEMDLGPLAPEHPIEIIVGVILVLLLTWLIAKAVVPRFEKLYEERTETIQGGIERAE RAQAEAKAALEKYQAQLASARDEAAQIRDDAKSQGAQIIAEMRANAQEEADRITERANAQ IQAERDQAVREVRAEIGGLATTLASRIVGESLQDDQRVQATVDRFLSSLADEPSASNSRT VNRA >gi|302034487|gb|GL383264.1| GENE 446 443238 - 443459 364 73 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4309 NR:ns ## KEGG: HMPREF0675_4309 # Name: not_defined # Def: ATP synthase subunit C (EC:3.6.3.14) # Organism: P.acnes_SK137 # Pathway: Oxidative phosphorylation [PATH:pak00190]; Metabolic pathways [PATH:pak01100] # 1 73 1 73 73 100 100.0 2e-20 MVPMLIGGSLNVLGYGLAALGPALGVAWIFAAVINGTARQPEARPAMMTTAFIGFAVVEA LALFGFILAFIVK >gi|302034487|gb|GL383264.1| GENE 447 443443 - 443586 76 47 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4308 NR:ns ## KEGG: HMPREF0675_4308 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 6 47 1 42 42 77 100.0 2e-13 MSMGTMVFPSGFCAPSGGVVFVAGRFDDEVLEVVCRQCSSDIEDATY >gi|302034487|gb|GL383264.1| GENE 448 443550 - 444305 600 251 aa, chain - ## HITS:1 COG:CC0368 KEGG:ns NR:ns ## COG: CC0368 COG0356 # Protein_GI_number: 16124623 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit a # Organism: Caulobacter vibrioides # 32 243 41 244 253 107 38.0 2e-23 MEFHTPGLEDFKFGGTFGVAWMDKPFWQVIIAFLVVIVFWVWISRGLKVVPGKRQVFGEY CYNFIRNSLARDTIGHGFEPWLPYLVALFSFILINNWFGELFVFMFPTFSHVGYVYGLAI VSWFVYVIAGFKTKGIRYLKDSVLPPGVPWYLRWFIIPLEFLSNFVTRPLTLSLRLFANM VAGHLIIMIFVVGGGFLLTYPSSIIYNVAGGLSLILSFALFALELFVGFLQAYVFTVLSA QYVASSMSEEH >gi|302034487|gb|GL383264.1| GENE 449 444323 - 444601 252 92 aa, chain - ## HITS:1 COG:no KEGG:PPA1246 NR:ns ## KEGG: PPA1246 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 9 92 1 84 84 155 100.0 3e-37 MAAKVSIDMSTNSMRRTSTSSAPSSDGDAWGVLSYVLAGMLFYGGIGWLLSSHFHQVWIF VVGMIVGFAASVYLIVKRYGVVPNQNNDREGQ >gi|302034487|gb|GL383264.1| GENE 450 444616 - 445110 236 164 aa, chain - ## HITS:1 COG:no KEGG:PPA1247 NR:ns ## KEGG: PPA1247 # Name: not_defined # Def: putative cyanate permease # Organism: P.acnes # Pathway: not_defined # 1 164 1 164 164 291 99.0 4e-78 MARLAMSHARVDRRAPVTSRVVSRVYRSGLLWATIVGLLVTLVMTVIVRPRVPSAFSGLA GTVVAVAFLACGRGVHLLNRSGSWLLAVGLFVIQVSVLGGLGALASEYRTGLIPLPCTSA MIGSLLAWTVGVVLAGWQPQRIYEDPEDHDPANAECRQADGGLR >gi|302034487|gb|GL383264.1| GENE 451 445267 - 446370 512 367 aa, chain - ## HITS:1 COG:MT1341 KEGG:ns NR:ns ## COG: MT1341 COG0472 # Protein_GI_number: 15840752 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase # Organism: Mycobacterium tuberculosis CDC1551 # 1 329 31 361 405 223 44.0 5e-58 MREYLLVMLTSGLTTYLLSGLCRQAALRWGAVAKVRSRDVHTVPIPYFGGVAMLGGVALA CLLARNMPFLGRHLLVADDALTICLAGVVICAVGVVDDLLDLPALAKAAGQVLAAGIVVT GGVRMFWIPLPNSIIALGTPTSILVTVFFIVLCANAVNFIDGLDGLASGVVAIGSLAFFS YTYLLAHEQDFVVATTTSLITAATAGACLGFLPHNWHPARMFMGDSGALLLGLLLATSTI SLTGQIDSTALTARGGGLVPAYLPIVVPLMVLAIPFLDLVMGYVRRTWRGTWFFVADKQH LHHRLLQRGHSHMRAVLLMYLWTTVLTFGTVFIGLEQTWWAIVIVVTGLGMCVLLTMANS HHPAAQA >gi|302034487|gb|GL383264.1| GENE 452 446379 - 447242 706 287 aa, chain - ## HITS:1 COG:MT1340 KEGG:ns NR:ns ## COG: MT1340 COG0009 # Protein_GI_number: 15840751 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation factor (SUA5) # Organism: Mycobacterium tuberculosis CDC1551 # 46 249 5 207 217 160 48.0 2e-39 MDETDQTMVNTDELAGPVAEEKSTVSGIEPRGDAAAEDSGISPFILDVANPDSCEDALEQ AADAIADGECIVLPTDTVYGIGADALNALAVQRLLNAKERGRDMPPPVLVSDSVALPALC QHIPAGAKALAEKYWPGGLTLVLRAQESLGMDLGETNGTLAVRVPDQDQTRELLRMTGPL AVSSANKSGHPAALTAQEAADQLGVEVAVYLDAGPSRVGESSTIIDFVSTTDGKVVRQGA LSLEAIHEVTPDVIGMEPPAIDQDSSENHGSDVAPTEATSTQSEIEG >gi|302034487|gb|GL383264.1| GENE 453 447235 - 448020 257 261 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|107028787|ref|YP_625882.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Burkholderia cenocepacia AU 1054] # 31 241 71 288 302 103 31 1e-20 MLLCEALRIQPSQLIRVASVNADDEDRFNQMVDRRRSGEPAQYIIGHAWFRGLRLEVGPG VFIPRLETELVAEQSIQEARRLVMSGAFPSVIDLCTGTGAIALAVASEVPGSRVSAVEVD DAALTWTRRNLCDSGVEVLAGDALRVPDDSRRFDVVVTNPPYLRRSDASSIPGEVTEHEP DLALFSGDDGLDLPLLLIGRAAELLTPSGLFVMEHDETQREELVAAMATSDMWEQIEDHD DLAGRPRFVTARRRCKDGCHG >gi|302034487|gb|GL383264.1| GENE 454 447984 - 448178 69 64 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTVGFSVLHIATCVHLLPGSQSPRWSVVEWLVPGGEMGWDLPLGFLTFGPLCHPTPHLIG MERV >gi|302034487|gb|GL383264.1| GENE 455 448110 - 449195 396 361 aa, chain - ## HITS:1 COG:MT1338 KEGG:ns NR:ns ## COG: MT1338 COG0216 # Protein_GI_number: 15840749 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor A # Organism: Mycobacterium tuberculosis CDC1551 # 7 354 6 356 357 325 53.0 9e-89 MSESAQQAIDEVRRRLREIETQLADSAVLSDPSAMGRLGKRHARLRHVVSVADRVDQLRA DVEAAEDLTEEDPAFGLEAERLRGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEE SALFAADLLRMYTRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPSRPAYGYLKHEGG VHRVQRVPVTESSGRIHTSAVGVLVMPDVDETEVDIDPAEVRVDVYRSSGPGGQGVNTTD SAVRLTHLPTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTV DRSARVRTYNFPENRLTDHRIGYKSRKLDQILAGDLGDVLDALHADEVRRRMAQRPEGQE S >gi|302034487|gb|GL383264.1| GENE 456 449317 - 449526 378 69 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|50842732|ref|YP_055959.1| 50S ribosomal protein L31 [Propionibacterium acnes KPA171202] # 1 69 1 69 69 150 100 1e-34 MKQGIHPDYRETTVVCTCGNTFTTRSTSQSGTLNADVCSKCHPFYTGKQKILDAGGRVAR FERRYGKKN >gi|302034487|gb|GL383264.1| GENE 457 449642 - 451543 1250 633 aa, chain - ## HITS:1 COG:Rv1297_2 KEGG:ns NR:ns ## COG: Rv1297_2 COG1158 # Protein_GI_number: 15608437 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Mycobacterium tuberculosis H37Rv # 250 630 51 434 440 490 68.0 1e-138 MTQTSQPDGSLDLSTKLLPELRSIATQMGIKGARGMRKADLIAAISEGGYPGVGRPAERQ NRGQESGTSSDEGRQQRTQRRRRAEASEDSEFNKSAGGKKTPSVGDLLDAAEAQKQAETA KKPDDQDPGQQDGGADRPGRERGDRSRRGDSPRRRARNTSRENSNSNSGDSNINDEVGAR LEALSRGQRGERNQSDRGPQHDHNNDSSVDSDDEYGRFSEYGNGGRRSRRRRQRDRQNRR KRSNDRYSDSEPNVREDDVLVPCSGILDIRDQYAFVRTSGYLPGANDAYVSMAIVRRHRL RKGDVIVGQMRAHREGERREKFAPLVKIEQVNGVDPEQMKQRPEFSKLTPLYPQERLRLE DDPKNMTGRIIDLVSPIGKGQRGLIVSPPKAGKTMIMQSIANSITRNNPEVHLMVVLVDE RPEEVTDFQRTVSGEVVASTFDRPADDHTQLSELAIERAKRLVELGHDVVILLDGITRLG RAYNLAAPASGRILSGGVDSAALYPPKKFFGAARNIEHGGSLTILATALVETGSKMDEVI FEEFKGTGNMELRLRREFANKRLFPAIDVDASGTRREELLLSREETAIMWKLRRVLSGLE GSQALEMMLSRLRKTQTNVEFLYTISKTTPNQD >gi|302034487|gb|GL383264.1| GENE 458 451842 - 452732 622 296 aa, chain - ## HITS:1 COG:Cgl1158 KEGG:ns NR:ns ## COG: Cgl1158 COG0083 # Protein_GI_number: 19552408 # Func_class: E Amino acid transport and metabolism # Function: Homoserine kinase # Organism: Corynebacterium glutamicum # 5 274 11 282 309 170 42.0 3e-42 MDNSVRVRVPATSANLGPGYDCIGLALDLWDEVSVGVLDRPGVMIDVTGEGADTVPHDES HLVMATLRQGLVELGYPHPDAGLHLTAINSIPQSRGLGSSAAAVVSGLALAWGLARPGFP LDRSALLTMAAAIEGHPDNAAPAILGGAQLAWLDGEAVNHIGLTVNPSIVFRVYVPDRLV PTALARQVLPEQVDRVDAVHQVLAASLLVTALTTSPEHLLAATQDWIHQPYRRALMPESA ALTDRLRGRGVATVISGAGPTVLALGSRDQLEKVSDVDTAGFVAHDLVLGEGVHFF >gi|302034487|gb|GL383264.1| GENE 459 452743 - 453813 911 356 aa, chain - ## HITS:1 COG:TM0546 KEGG:ns NR:ns ## COG: TM0546 COG0498 # Protein_GI_number: 15643312 # Func_class: E Amino acid transport and metabolism # Function: Threonine synthase # Organism: Thermotoga maritima # 8 353 3 347 348 376 55.0 1e-104 MSQQNRLFGVIETYRDRLPMDGIDQIVTLGEGATPLVPAPRLGAELDATVWVKVEGANPT GSFKDRGMTMAMTKALADGSKAVVCASTGNTSASASAYASRAGMTPVVLLPQGKIAAGKL AQAVVHGGRIIQILGNFDDCLRIARELAENFPVSLVNSINPYRIEGQKTAAFEVVDVLGD APDIHALPVGNAGNITAYWKGYREYVADGPASHTPRMFGFQAAGAAPLVLGHDVNDPETV ATAIRIGRPASGKLALAARDESEGLIDAVTDEQILDAQTFLAAREGIFVEPASAVGVAGL FKLKSEGRLDPGLRIVVTVTGNGLKDIDTALSRTTWSTEAVEASTDQVAALLDFCS >gi|302034487|gb|GL383264.1| GENE 460 453816 - 455141 829 441 aa, chain - ## HITS:1 COG:Cgl1157 KEGG:ns NR:ns ## COG: Cgl1157 COG0460 # Protein_GI_number: 19552407 # Func_class: E Amino acid transport and metabolism # Function: Homoserine dehydrogenase # Organism: Corynebacterium glutamicum # 13 439 19 443 445 385 52.0 1e-107 MTNTTDSASAQPIRVALLGCGVVGSQVARMIESRTEDIAARVGRQVELAGIAVAHPDRPR QGLDSRLFTDDPTVLVNRDDVDIVIELIGGIDPARQLLTAALGKGHSVVTANKALLAAHG TELHAVAESNGVDLYYEAAVAGAIPIVRPLRESLVGDQITRVMGIVNGTTNYILDQMTTT GARFDEALAQAKAQGYAEADPTADVEGYDAAAKAALLSSLAFHTQLRGDQVYREGITEIT PDDILAAHDMDCVVKLLAVCQAGPDGISARVHPALVPATHPLGSVSGAFNAVFIEAREAG RLMFLGPGAGGSPTASAVMGDLVTVARNLVRGVAGPPQDVYGEFPILPMSEVHTRFHLRL QVRDEPGVLAEVAKIFASHRVSLQTVQQSAVEGTDRADGWSATLKVLTHEARECDVDECV NELTGHHYVNSDPRVIRVEGM >gi|302034487|gb|GL383264.1| GENE 461 455212 - 456642 845 476 aa, chain - ## HITS:1 COG:MT1332 KEGG:ns NR:ns ## COG: MT1332 COG0019 # Protein_GI_number: 15840743 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate decarboxylase # Organism: Mycobacterium tuberculosis CDC1551 # 31 465 7 445 447 437 52.0 1e-122 MTHMHVAGSVHADVAAAGPQWLTLPDDVNALDPALWSASTDRDDDGIVEVAGVTVTELLS QYGSPLYVLDESDLRQRARAFRDAFSEWDVYYAGKAFLTRTIASWIDQEGLFLDTCTGGE LITALQGGMDPARIGLHGNNKSIDELKLALSVGVGRIIVDSLDEIMRIEQLCRENGWHAR VMVRVTAGVEAHTHEYIATAHEDQKFGFSITNGAAMVAMVRCHTSDAIDLLGVHSHIGSQ IFDTAGFEVAARRTMKLLEQFHQATGSALPELDLGGGFGIAYTSQDSPATVESLAGALRE IVTLEARGRGMEVPHISLEPGRAIVGPTTMALYTVGTVKPVDLDTGAQRMYVSVDGGMSD NIRPALYAAEYSAVIANRTSEVAPVLCRIVGKHCEAGDILVRDVYLPGDVSPGDVIAVPG AGAYSRSMASNYNHVPRPAVVSVNEDRGVLVLLRRENIDDLLALDPGPIRAEVPCP >gi|302034487|gb|GL383264.1| GENE 462 456890 - 458206 748 438 aa, chain + ## HITS:1 COG:no KEGG:PPA1260 NR:ns ## KEGG: PPA1260 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 438 1 438 438 795 100.0 0 MPFRDAKTARQGSRAALFSAAGAIVLWTVGRLVMLHVFIQPSSNYITGDLRYYLWWMSSG QPDSSVLPEYPLPVVWFMRTLYWAGGDTYFPMAFSMTMLLLDAILAVAMWHDGHRAGALW WIVLVPFLGPIMWNRFDMVPAVCMGLAALWYRRHPAACGAMIALGAATKLWPALLILPMI SRHRAAVRRLIAFTITGFGLALASLLAGGWERLVSPLTWQSGRGLQIESVPATIPMLHYF RNPHGDHTVRMSSYNAYEIFGPSVASWKSVSTGLMVLAVALAIGLAVVSWHRNGLDHRTA VMADLVIIGALIVANKTLSPQYFIWWAAPTAMILDRVSAEAKDPGDSDALSWARTWCWIV AVLMAVTTFMTQQVYPLHYQKILGGSSSTGWLLVSRNMLVVMTFAACIATLVASLRMHVP AQPTVTPARPRHAALNER >gi|302034487|gb|GL383264.1| GENE 463 458293 - 458460 60 55 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSQSLAPKSGELLDLSCGAGLTTAFFRQTVVSSARGTFRQALRAALLCLCLSTQT >gi|302034487|gb|GL383264.1| GENE 464 458396 - 462103 2541 1235 aa, chain + ## HITS:1 COG:MT1286_3 KEGG:ns NR:ns ## COG: MT1286_3 COG0567 # Protein_GI_number: 15840693 # Func_class: C Energy production and conversion # Function: 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes # Organism: Mycobacterium tuberculosis CDC1551 # 352 1235 2 896 896 921 52.0 0 MSPAPHDKSNNSPDFGANDWLIEEMRDQYQSDPNSVDPAWATFFRKEAVESTDSVTKSAA KDVPGASAPKPATKPQPVPAAKPAPITAPKPQKQPPRPPMSADAPRHSAKLETVEPTVTK MKGAPMRTAKNMDQSLTMPTATTVRDVPMQLVIEQRTMINSFLKKAKGGKVSFTHILAYA MVQALKTVSAMNNAYAEIDGKPHLIENHQINLGMAIDVIASDGSRKLVVPAIKGAEQMDF LDFWRAYEEIVRKGRTNELTVDDFKGVTASLTNPGGFGTNHSIARLMPGQGMILGVGSID YPAAYQGNSPTRIAELGISKVTTLTSTYDHRIIQGAQSGEFLRRMHQLLLGADRFYEDIF ESLRIPYAPVQWASDRLANRADQVGKQARVIELIDAWRRFGHLSADLDPIEYRPRFHRDL MLNSHGLTLWDFDRTFPIANFAGQRRATMSLREILTILRDSYASKMGIEYMHIADYEQRK WFQDRFEKEHQPLSRKMHLQILDQLNEAEIFETFLQTKFVGQKRFSLEGGESAIVLLAAL CNRAADDGLNEVCIGMPHRGRLNVLANIIGKSYGQIFREFEGNAEPVNSQGSGDVKYHLG DEGQFTAASGNTIKASVAANPSHLEAVDPVLEGICRAKLDALGNPEGFPVLPILMHGDAA FAGQGVVYETLQMSQLGGYRTGGTIHVIVNNQVGFTTSPRDGRSSTYCTDVAKAVGAPVL HVNGDDPASVVHAARIAYEYRQTFHRDVVVDVVCYRRRGHNEGDDPSFTQPHMYGLIAEK RSTRKLYTESLIGRGDITTEDAEAVMTKFRSRLETVFKEVREATSTPEPYSGVPDYPVKH SGLHQTKVEPDTMEAVARAHENLPESFNAHPKVAPQMTRRAKHIREGGIDWATGEMIALG SLLRDGVHVRLAGQDSRRGTFSQRFAALVDHETGEFYVPVNHLGGEQAHLDVFDSPLNEY AAMGFEYGYSVARPDSLVLWEAQFGDFTNGAQTIIDEFIASAGSKWGQKSGVVLLLPHGY EGQGPDHSSARLERFLNLCSEDALAVCQPSTPASYSHLLRQHAYVNMHRPVVIATPKSML RNKMATSDPEDFTTGRWRPVLPDPSITDPTAVTRIILCSGKARWELVKQRKATSLDGQLA IIPMERLYPLPVDELAEVLAPYTNVTDVRWVQEEPENQGAWYYMLTHLPQAMSEKLPGFF DGLVGITRPPSSAPSVGQHSVHIREEQELLEKAMA >gi|302034487|gb|GL383264.1| GENE 465 462170 - 462346 169 58 aa, chain + ## HITS:1 COG:no KEGG:SAV_2975 NR:ns ## KEGG: SAV_2975 # Name: not_defined # Def: hypothetical protein # Organism: S.avermitilis # Pathway: not_defined # 1 58 48 105 107 93 81.0 2e-18 MYFTDRGIEELEDRRGDEEITFTWLADELRHFVDLNPEFEVPVERLATFLARLDDEDE >gi|302034487|gb|GL383264.1| GENE 466 462401 - 462799 289 132 aa, chain - ## HITS:1 COG:no KEGG:PPA1263 NR:ns ## KEGG: PPA1263 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 132 1 132 132 179 100.0 3e-44 MIPSSEHDVRSSVSHGRVPAAVLVAVAGTWISTVVLLIVAIRVMVSGRDIFGAGVGAMLI IYASLVALVGWLAIKGRSSAQGLLVASGMLHLVVLVSTQRSGGPAWFWGLAIIPATVIVA SLVPRSRTWLRG >gi|302034487|gb|GL383264.1| GENE 467 463081 - 463332 270 83 aa, chain + ## HITS:1 COG:no KEGG:PPA1264 NR:ns ## KEGG: PPA1264 # Name: not_defined # Def: transcription factor WhiB3 # Organism: P.acnes # Pathway: not_defined # 1 72 59 130 141 139 100.0 4e-32 MDWRHRAACLSEDPELFFPIGNTGPALAQIEEAKKVCARCEVRAECLAWALEAGQDHGVW GGMSEDERRAIKRRQSRSRVRRS >gi|302034487|gb|GL383264.1| GENE 468 463362 - 464837 1051 491 aa, chain - ## HITS:1 COG:ML0803 KEGG:ns NR:ns ## COG: ML0803 COG3920 # Protein_GI_number: 15827350 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Mycobacterium leprae # 1 490 1 494 500 306 41.0 4e-83 MPALNRIVADRTRLDDADITWLEDLVDDWQMLADTSFSDLILWVPDRDPNVFWAVAQVRP DTGPTALEDDVVGESVAYDDESLVTEAFMSAEMCETSDNKLSAGIPVDIWAIPVVRRGEV IAVVERHTNQMGVRAPGNTEDNYLEIADILSEMLHHGRFPQFPGSDRALAPKVTDGVIRV AATGMITFASPNALSAFRRLGLAGDLDGEYLIPTVRELCPRLREVGQSLTLDLEGRWLTE TDIENSDATVRARVIPLQTWLDDVEVSAGTLILIRDLTELRDRDRQLVTKDATIREIHHR VKNNLQTVAALLRLQSRRMSNSDAKDALKQAMGRVSAIAVVHEILSQNFEEQVAFDEVAD RILHMVGDVAASSGSVVARREGSFGEVPAETATALSLATTELCQNAIEHSLDSSSGNVIV RSHRTDDALVVDIVSDGKPLPEGFSLDNHRSSLGLSIVTTLMQDLGGTFTLEDNSDRVGT CARLVIPLQRL >gi|302034487|gb|GL383264.1| GENE 469 465019 - 465093 83 24 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGKTGRKRRARRKKGANHGKRPNA >gi|302034487|gb|GL383264.1| GENE 470 465237 - 465497 289 86 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4330 NR:ns ## KEGG: HMPREF0675_4330 # Name: not_defined # Def: anti-sigma factor # Organism: P.acnes_SK137 # Pathway: not_defined # 1 86 3 88 88 150 97.0 2e-35 MTQSAGNEESCYWVIDHLQEFLHGEMSEHDADAFRRHIAACESCMDEADMEAAVSRALKR CNRTVAAPMQLRSRLVQMHVTYRWQA >gi|302034487|gb|GL383264.1| GENE 471 465500 - 466177 565 225 aa, chain - ## HITS:1 COG:MT3320 KEGG:ns NR:ns ## COG: MT3320 COG1595 # Protein_GI_number: 15842811 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Mycobacterium tuberculosis CDC1551 # 14 199 86 271 284 231 65.0 1e-60 MDRRVDASGTVDVAEETKTQRAQRFERDALEYLDQLYGAALRMTRNPADAEDVVQEAYAK AFSSFHQFRPGTNLKAWLYRILTNTYINSYRKAQRRPQTSDDQDVEDWQIAKAASHDSNG LRSAELEALDGLPDQQILDALDGLSDEFRQVVLLADVEGFAYKEIAEIMGTPIGTVMSRL NRARKQLRKQLVDVAGARGIGPRAGQVDEEDLGRSAIARRAGREG >gi|302034487|gb|GL383264.1| GENE 472 466401 - 467027 567 208 aa, chain + ## HITS:1 COG:Cgl1340_1 KEGG:ns NR:ns ## COG: Cgl1340_1 COG2259 # Protein_GI_number: 19552590 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 3 147 1 142 142 72 32.0 8e-13 MSIIRGLGRTMFASYFIVKGTNSAMKPDSFVEDAAPVVDRLLPVVQHALPASISAYIPED TKTLVRATGAAQAFGGLGMATGLARRAGAGVVAATMVPHVLASIPDKTSPKDERTAARSV LLRNVALLGGAMMASRDTAGHPSLAWRAADTQRRVSSAASGQRKAITSSVDGLSKSARKK LKKAQKKAAKTQKKAQKKAKKAQKKIAD >gi|302034487|gb|GL383264.1| GENE 473 467188 - 468306 540 372 aa, chain + ## HITS:1 COG:Cgl0740 KEGG:ns NR:ns ## COG: Cgl0740 COG0128 # Protein_GI_number: 19551990 # Func_class: E Amino acid transport and metabolism # Function: 5-enolpyruvylshikimate-3-phosphate synthase # Organism: Corynebacterium glutamicum # 1 369 64 429 430 298 46.0 1e-80 MSAGLQLLGADIQPIGPGSVQVMPGLAHPTGPIECGMAGTVMRFLPVVAALVPGQTRFVG DEQASRRPIAPVLNGLRQLGVEVDSDRLPFSLNAPDRMCGPKVTIDSATSSQFISALLLA SARFPQGIDLRHNGASVPSIPHIAMTCTMLADRGVTVVSDEPCHWVVRPGPIHALDDVIE PDLTNAAVFLAAALIVGGSVTVPGWPTDSTQPGAQFMGIAEKMGAMVSRVDGSMTIAAQG WQELRPLDVDLHEASELTPVVAAVASLARGRSRIRGVAHIRGHETDRLAALEHELAKLGV EVQQTDNGLDITGRGADKLHGGKFGCYADHRMAHAGALLGLVIDGVELDDITCTSKTMPQ FPQMWANLVEEV >gi|302034487|gb|GL383264.1| GENE 474 468308 - 469309 549 333 aa, chain + ## HITS:1 COG:ML0791 KEGG:ns NR:ns ## COG: ML0791 COG1162 # Protein_GI_number: 15827343 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Mycobacterium leprae # 21 328 15 322 327 282 51.0 8e-76 MSPRRLASSGIDMRDWSSYDRPKRRTKPRTKQRPDYSSLPIGTVITIDRGRYRCRLDDGV EVTAAKARQLGRKSVIVGDKVRLDGDVSGAEGSLARIVHTEERVTVLRRTADDTDPHERP IVANADQVVVVTALADPPPRPGIIDRILVAAHAAGVSPILCLTKADLASGDDFVAMYSQL GIPVTTSQPGADLAELHQLLRGKVSVLVGHSGVGKSTLINALVPGVNRVTGHVNDVTGRG RHTSTSAEAIPLSEGGWIIDTPGVRSFGLSHVPTGDILAGFEELDAVSVDCPRGCQHTNS SPECALDDAVSDGRVQQSRVDSLRRLLSATAPR >gi|302034487|gb|GL383264.1| GENE 475 469728 - 470540 489 270 aa, chain - ## HITS:1 COG:DR0964 KEGG:ns NR:ns ## COG: DR0964 COG2939 # Protein_GI_number: 15805988 # Func_class: E Amino acid transport and metabolism # Function: Carboxypeptidase C (cathepsin A) # Organism: Deinococcus radiodurans # 5 258 115 367 500 220 47.0 2e-57 MVAYGPRVVDLGTPEQPATPPFHLIDNEHTLLRETDLVIMDAMSTGYSRVVDGHDPNEWH GWSKDVELVSELIRLWVTRYGRWGSPLYLLGESYGTVRAVSVAQRLQDTFSMYLNGIILV SSVLDFGTQDFEDLTWDRACIGFLPTYAANAHYHGHNADRTLEDVLDEAEGFADGPYRKA LAAGHRLDPADRAQVVATVSRLTGLDVNYIERADLRIEHVRFCTELLRSKGKAVGRIDGR YTGALPRRTYEVADTDPSGDDTVAIFVHGF >gi|302034487|gb|GL383264.1| GENE 476 470747 - 471535 555 262 aa, chain + ## HITS:1 COG:Cgl0776 KEGG:ns NR:ns ## COG: Cgl0776 COG0483 # Protein_GI_number: 19552026 # Func_class: G Carbohydrate transport and metabolism # Function: Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family # Organism: Corynebacterium glutamicum # 20 255 20 256 260 234 54.0 1e-61 MADHTDDLRLAHILADDADSLTMSRFGARDLTVSTKPDHSEVTDADLAVEDSVRRTLSRM RSRDAVHGEERADTGDGPRRWIIDPIDGTANFLRGVPVWATLIALSVEDQIVASVVSAPA LKRRWWAARGSGAWSGKSLASATPIHVSNVRNLADAFLSYSSLHGWVESGRGHGFGELMR SVWRTRAFGDFWSYMMVAEGVVDVACEPELSLHDMAALDAIVTEAGGKFTGLDGKDGPWS GNALASNGFLHDQALAMVQPQE >gi|302034487|gb|GL383264.1| GENE 477 471579 - 472769 974 396 aa, chain - ## HITS:1 COG:HI0465 KEGG:ns NR:ns ## COG: HI0465 COG0111 # Protein_GI_number: 16272413 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Haemophilus influenzae # 1 396 12 409 410 390 49.0 1e-108 MKALLLENIHDEAVRTLKKAGYEVERVSEALDEDDLISALDGVDLLGIRSRTRVTRRVVE ACGDKLHAVGAFCIGTNQMDLDALAEAGVPAFNAPYSNTRSVVELVMAEIIALARRLGDR NTQMHNGVWRKSAIGSHEIRGRRLGIIGYGNIGQQLSVVAEAMGMQVFFYDIADVLPMGN AHKCDSMEELLGSVETVSLHIDGRPSNTDLIGDREFAMMRPRSLFLNLSRGKVVDINALV DNLRTGHIAGAGVDVYPEEPASGKEPFISPLREMDNVILTPHIGGSTQEAQVDIGRYVAG KLIDYVDNGATGMSVNIPEITPSPRTGARIGYLHRNVPGVMATLNRLVADQGGNVTYQAL ATKGELGYCILDIAETDSGLLANVTVLEGTIRARIL >gi|302034487|gb|GL383264.1| GENE 478 472816 - 473601 538 261 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 19 253 33 267 329 211 45 3e-53 MTAQIEVEDLHLHLGSSSGGTNALDGVSLHVNEGQRLGLVGGSGAGKSTLLKAMMALRQP DSGTVRFRGTSLTDANAIRELRRSAAMVFQDPRSSLDPRMSIGRAITEPLRSPVARRTTR QQRKDRLAKVMVDVGLDPESASRFPHEFSGGQRQRIAIARALVTEPDVLVADEPVSALDV SVRAQVLNLLNDLVRERGLTMIFVSHDLGVVRHLCDTVAVMSVGRIVERGKLADVYRDPQ HVVTQELLRAIPRIRVDDSTH >gi|302034487|gb|GL383264.1| GENE 479 473601 - 474410 430 269 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 3 250 8 258 563 170 40 3e-78 MPLLEVNDLVVDFGRHRRVAVDHVSWSLEAGERLGLIGESGSGKSVTALAIMGLLPGNAH VSGSVRWRGKELLGASDHAMSALRGGSIGMVFQEPMTALDPTMKVGRQVGEVPLLHRTVT RGHARGRVLEMLEQVGIEDPARVMDSYPHQLSGGQRQRVLLAMALVNSPDLLICDEPTTA LDVTVQSQVLATIDEVLDSVGAACLFITHDLAVVSHICRELIVMTSGKVVEAGSARDVLS HPDHPYTRRLLRAARLDLVEPGTTIALED >gi|302034487|gb|GL383264.1| GENE 480 474410 - 475222 492 270 aa, chain - ## HITS:1 COG:BMEII0286 KEGG:ns NR:ns ## COG: BMEII0286 COG1173 # Protein_GI_number: 17988631 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Brucella melitensis # 7 270 1 264 264 211 45.0 9e-55 MKRAGLVIGCVLVGIVVIAGATSAVWTPHDPNLVVPAERLTGPNGQYWLGTDGFGSDIAS RMFVGARTCLLVGVVSVLIAAGIGVPWGVTSAMLPRPWSTVVGRAADLLYAFPALLLAII LAAAVGGSTLTGMIAIGVSTVPVFARITRTASRQILAQDYVVAARSSGMAWRSVAFNHVL PNIAPLIGVQASVSYGTAILAEAALSYLGLATPATVPTWGRMLRDSQVYLFDSPWLTVAP AVAIAGAVMGFTLLGDGLRDFLDPRLREVR >gi|302034487|gb|GL383264.1| GENE 481 475219 - 476151 628 310 aa, chain - ## HITS:1 COG:Cgl2269 KEGG:ns NR:ns ## COG: Cgl2269 COG0601 # Protein_GI_number: 19553519 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Corynebacterium glutamicum # 3 298 16 307 322 227 47.0 3e-59 MWLIVASFVVFALLSLLPGDVAQVILGANADPKAAATVRSRLGLDLPWPQRYWDWISSLV RGDLGTSMVSAEPIGPQIASRLAVTGWLVGLSLVLALLVCLPVGAYAAVHRRKSRGFVAS ALSQVLMSIPAFLAGILLILLFSVTLGWLPAGGYVPLHEDAGAWAAHLILPVLSLSIVQA AVMMRYVRSAFIDVLTDDHMQTARAVGWRLWPALHRHGLRNASISLATVLGLQASAMLVG AIVVEEVFVIPGLGSYLLDAVSTRDLLVVSDVVMVIVAIVMAISYLTDLIVVVLDPRLRT TIRAAQEEHS >gi|302034487|gb|GL383264.1| GENE 482 476193 - 477680 1048 495 aa, chain - ## HITS:1 COG:AGl861 KEGG:ns NR:ns ## COG: AGl861 COG0747 # Protein_GI_number: 15890545 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 7 491 50 536 540 279 34.0 8e-75 MRDQLKAAGLAVAVALSATGIAGCQSTDDNVLTIGATAAPPTLDLVSNAAAAIPQVLLYN VYETLVRVNDSGKLVGLLAKSWKLSDDGLRLTFRLDPNARFASGARVTSAAVKASLELMR GASASPVNQANLAAIKAIHTPDDSTVILDLSNRDNFLLFNLASTSGVVIDPATKDLATRP QGSGPYVVTEFTPGHSVTLSPSPRPWHEGNRPTVRFAYYSDPTSQTAALLSGDLDVVSDM TTPQALSRFTGNPNYRVLRGTTNGEVVLGMNNTSKALSDRRVRQAILMAIDRKGLLDVVW NGQGTLIGSMVPPTDPWYTDLSHTWPHDPVRARKLLADAGYGNGLTLRLRTAALPYATAA SRVVASELAQVGINVVTDELEFPARWLDVVYTHADYDLTIVAHVEARDIVNWANPDYYWR YHNKEFNRLIESARTGPADRTNETMMQASRILATDAAGGFLFLMPKITISKSGITGLQRN STSMSFDLTKVRRSK >gi|302034487|gb|GL383264.1| GENE 483 477945 - 478157 148 70 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFRKRLTRVELGRALGVTPAAAGRKLRGEIGWSIGDLFHVAEFLGVEVSTLLPARGRKIP ANPEADGEAS >gi|302034487|gb|GL383264.1| GENE 484 478723 - 478926 66 67 aa, chain + ## HITS:1 COG:no KEGG:PPA2384 NR:ns ## KEGG: PPA2384 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 67 118 184 184 116 100.0 3e-25 MSSTTRTEAGGFFVSGVTISLLRCGAATLVLFLPSSIVSPIRVKALGYGQVPVWWGGQCG GVSGQGC >gi|302034487|gb|GL383264.1| GENE 485 479580 - 479960 144 126 aa, chain + ## HITS:1 COG:no KEGG:PPA2383 NR:ns ## KEGG: PPA2383 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 126 6 131 131 214 100.0 7e-55 MSKRHPGRFGHIVAEIIQDIVGVGVVAINSTVLVIMAAVLAEYVPYKHFYHVVGNVVVYA CLAAAIAVPFFVHHWRKRRPGSHPATDYVGRSVRRAGLLTLIGTMFIGKLVSPATRGMSR SSRRRW >gi|302034487|gb|GL383264.1| GENE 486 480306 - 480719 373 137 aa, chain - ## HITS:1 COG:no KEGG:PPA1278 NR:ns ## KEGG: PPA1278 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 137 1 137 137 224 97.0 1e-57 MSMTAEVGTVYDVIAHREVSPEANFWVFEIPALGAVGQAVKLGQVADEARGIITAWDEDG PDEKAFKVHVRLDGEADARRMWEEGEEEEHQARKVLDHAATRKREAVTLLRVEKKYSATD TARVLGVTRQRVYQLTR >gi|302034487|gb|GL383264.1| GENE 487 480920 - 481177 301 85 aa, chain - ## HITS:1 COG:no KEGG:PPA1279 NR:ns ## KEGG: PPA1279 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 85 1 85 85 134 100.0 8e-31 MSKNRKPTAADKASRYTGRMAASQGASVSETFQSAKTPITAFNVKLPTATHTALKMRAVE EHTTMNDLLRKALEHTYGFPYDPYQ >gi|302034487|gb|GL383264.1| GENE 488 481174 - 481839 531 221 aa, chain - ## HITS:1 COG:slr0110 KEGG:ns NR:ns ## COG: slr0110 COG1192 # Protein_GI_number: 16331850 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Synechocystis # 30 151 5 126 211 80 37.0 2e-15 MWAGFSSHTTPIHRCIDALIHVCNDADMSRVISVVNTKGGVGKTTTAVYLATALSCQDRV VLLDADPQGSATSWATDAFEAGDRLNFEVRPANAPIVRRCRDIDADLVFIDTPPGDSQTV TAALEVADVVIIPTESGDLDMDRALMTYQVAHGTRRALLFNKADWTRQYRDAYEGAAAVE GLDVLDAEVHRRVAYRQAIGTRPTDLGEFAQVAAQIQEMLK >gi|302034487|gb|GL383264.1| GENE 489 482132 - 482902 614 256 aa, chain - ## HITS:1 COG:no KEGG:PPA1281 NR:ns ## KEGG: PPA1281 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 256 18 273 273 494 99.0 1e-138 MKRRKITYVAVGVLALSLIIFGTILAINKSRQGPAIETSQDTISKAIVSIPKSVYDKVGP GSSELQVTKIGNKPDKDGKVKLFYVGSEFCPFCAMERLPLAAALSRFGTFSGLKDTLSSP AEKELSNIPTITFRNYKYSSKYVDLDAYELADREGRQIANLPESKQDIFSKYNPGRGIPF SYWGDITTSNPSYMPWMAREDPKNVVKALSNPNSKEAQAIVGGANLFTAEICSRTGNKPA NVCTSPGVKAAAEKLR >gi|302034487|gb|GL383264.1| GENE 490 483366 - 483605 101 79 aa, chain - ## HITS:1 COG:no KEGG:PPA1283 NR:ns ## KEGG: PPA1283 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 79 1 79 79 125 100.0 5e-28 MVSRWAGEAESGFEGLQVESFGGRAWEEVETEPLEPCTIRVSASVWRLIERDVSRQGMTV SAWTCQALTREVTQTLKAS >gi|302034487|gb|GL383264.1| GENE 491 484253 - 485275 734 340 aa, chain - ## HITS:1 COG:no KEGG:PPA1284 NR:ns ## KEGG: PPA1284 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 340 67 406 406 531 100.0 1e-149 MTRGGALFLASPLHRLSVRSCVRIALTLISVSYAVVALTANPYAIIAALGAAGLGFSVNG TGVRSFIALATPDRASQNRGFAVIQVVANCTAAVGPIIGNMILDRNIYEQFLLGVSVALF IAAILAPMAAPKGVMMSEGSLRPPMGIKIFRELFRTADARKITIVALIGSILIGQFFSSF SLVFSAIATSSMMRSLFYTTNGVLVVLIQIPISLLVERQLKIGVKVQKIMMSGVCTLGIS MLFFNASRGLLGVVLVFCGVFIFSLGETVFTPILNVAFANLTEGRPVVESMNMRQLTSAV GETVGVWIGLSVYSQLEHAHLGLMYWIALTALAALSLRCK >gi|302034487|gb|GL383264.1| GENE 492 485448 - 485600 70 50 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313807795|gb|EFS46282.1| ## NR: gi|313807795|gb|EFS46282.1| hypothetical protein HMPREF9580_01626 [Propionibacterium acnes HL087PA2] # 9 50 1 42 42 65 97.0 1e-09 MHRICHTNMSIKLEDSCGKIKFVMKRLKKLLASLIGLKSRGASEDNRDTK >gi|302034487|gb|GL383264.1| GENE 493 485636 - 485806 130 56 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|314917982|gb|EFS81813.1| ## NR: gi|314917982|gb|EFS81813.1| hypothetical protein HMPREF9598_01546 [Propionibacterium acnes HL050PA1] hypothetical protein HMPREF9595_00305 [Propionibacterium acnes HL005PA2] # 1 56 1 56 56 97 100.0 2e-19 MLLVHAKIIGRSRGWRRVRIVVLSSLVPIIHIADGLSVYDARTHLDRELNHEPLWE >gi|302034487|gb|GL383264.1| GENE 494 486063 - 487370 241 435 aa, chain - ## HITS:1 COG:no KEGG:PPA1285 NR:ns ## KEGG: PPA1285 # Name: not_defined # Def: putative biotin carboxylase # Organism: P.acnes # Pathway: not_defined # 1 435 1 435 435 892 99.0 0 MFSRDSVVAERNWAVLVGVTTSGSHASTRWFKSFYEACQKRHIMICGVDFEEELKNKIPP ISVDCLIRISGPYRRSLDADEIAKIATEIETRCPGRVALSTALRENYQLQNSLLAEAIGV ARNTADCIERIQDKPACRDALRKAGIYQPQSLRIVGVTSDGCLQFSDASGAVVEKPTDSP RGWIVKPSIGMGSVGVRHILNVEDTSGLDAVVLEGNYCLEEFITGIEYSVEGIAIDGRVC IYTTTAKTTNEDFVEIGHIQPADLNSISSKLEFEEQLQSCVNALGIECGNLHVEFWVTPE KKIVWGEFHVRQGGDFIAPDLVSAVRPGIDYYGNLIDSLCGLPLHPLPEITQCAASKFIE ASPGVVSEVSLYDSVPEEIDLYWECFPGEVAHAVNGSHARVAAIVARGNDEHTVTQLLDR AANACVVRVAPVSRD >gi|302034487|gb|GL383264.1| GENE 495 487357 - 487878 168 173 aa, chain - ## HITS:1 COG:no KEGG:PPA1286 NR:ns ## KEGG: PPA1286 # Name: not_defined # Def: putative thioesterase # Organism: P.acnes # Pathway: not_defined # 1 173 65 237 237 363 100.0 1e-99 MGEFVSKFRSSFDIPTGPLILAGVSFGAMLAFVAAHILENDGIFATRLVALCGQSPKSYR GEREGWNLERARQRMRSYGLTPKSILNSDESDDLFVRPTLDDLLLAESCCGNQLKQIHVP ITCVSAIDDKIVSSEEAIQWREATSETYRLIEVTGGHYAHEGFRRKEWLNVFS >gi|302034487|gb|GL383264.1| GENE 496 488067 - 489806 321 579 aa, chain - ## HITS:1 COG:BS_ppsB_1 KEGG:ns NR:ns ## COG: BS_ppsB_1 COG1020 # Protein_GI_number: 16078894 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Non-ribosomal peptide synthetase modules and related proteins # Organism: Bacillus subtilis # 133 576 607 1041 1050 169 28.0 2e-41 MQPSHDLLEGFRNIVIQKPGDVCLTGPAGEQCSWEQLVKNILAWRRWFNRKQSEGVTFAA RLDLSAKSVALVIAAVTLPVKIAWIPLNIPASRERDMIINLGPKTVLIDDSTAEEAIFAG NWISDVRSLTWSGKSKFLYFTSGSEGVPKAVQVGMDAVRNRITWMWNAYPYESSDLVVVQ KPLSFVASFWEVLGTLLAGVTGVLITNIERSRPDVMFDRLASSGATHLFTTPPALASLCD IATEQGSTLPQLRLACSSADQLMASVVRQFFEIAPRARVVNLYGATETSANTTSFEVSRS GSIPDPIPLGEPICATKIVIRDMKGNEKLSGEEGQICVQGAPVADGYIVNGQLSPGDDAF FTLGSGQREIRTGDLGIIKDGVLSLVGRLDNAVNIAGYKIHLEEVERAAARVANSTKQCG AVYHQGSGGFLALVIPREWESQVTTSRLAEFLPSYMIPLKIVTTQNVPRSRTGKIDRSEC LKLVTQSELYDHDRISQGQMQRNSVHDQVQNIWDMVLGKKSHGEDRDFFSAGGNSLRAVQ LLTAIGKQFGVRVPLRNFYSNPTISCLVSLLMPVEEREQ >gi|302034487|gb|GL383264.1| GENE 497 489829 - 493125 724 1098 aa, chain - ## HITS:1 COG:PA2424_4 KEGG:ns NR:ns ## COG: PA2424_4 COG1020 # Protein_GI_number: 15597620 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Non-ribosomal peptide synthetase modules and related proteins # Organism: Pseudomonas aeruginosa # 28 641 468 1091 1102 266 33.0 2e-70 MINLTKSLEKNGLSLLATGSALVGENVDWPLERTLYSYLVEWAQITSHHVTVIDIHGEEI TYEMLLNRVNNRAYLLEKKHAFGRVVISEHSRGIECLVDILACSAVGAIYTPIDPQWPEA RRKHIKTITNAAAIFTENTSHVTEAKAPLGVTFLERVDDPFNTPSYCFFTSGSTGEPKGA LIAHMGMMNHLHSKAHLLHLGADSVVAQTAPTTFDVSIWQFCSALLVGGAVRIVPNGISQ DPHELFSLLKEKHITHIELVPTVFRELIHEIGPSVSFSGLEYVLVTGEELPLRLAKDWAE KFPSVPLINAYGPTECSDDVTHAIVDGESLNSGEVPIGIPIPNASLYVLEYAEGTWRPVP PGAQGELFVAGLCVGLGYIGSPDKTAQAFARIDGYPFRIYRTGDLVHQRADSQLVYDGRA DRQIKISGVRIEPGEIENRILQEIPELEDVVVVKFHPRVRERRAMVLRETTHQFLRQGDA SLAAFYLPRADCLITPKMLNNRAKSSLPRVMCPSRWIEVTDIPTTSNGKVDIKLLERRAG ELLLNEIQESREGSIPGRVEQNQDSFILLVQDVLGTPVNPELTFIESGGDSLRAIQLANI VRSRGSYVRVRDLLSSYTLGSLAKEYQAQQISPKKSTSAKRSPSRFDDVKIPLTCDMNPA QQGIYFQWLLEPESPYYNYQILLECAGSNTDRIRRALGQALRANPQLMAKFGVDSTGRFT QTFPISAIDMDEISIHEVASAQEARKICWMKAAVPFNLEEGPAIAVDEIRINGYSTWFVL TMNEILIDGWGAMKFMEQLISLFECRNMDDQKIEVKTAMTSALEYFQHLSKPEEISAEAR EFWSKSLDGVKSCFPLRDTLNSSCDPYAASVIEVSLDDEATAEIRSTAHALSTSPFAVFV AAYSLALAAVSDQHDFVVGAPVAGRNDEYEIGVPTLMLNMIAIRTRIDVEKKISDTVRSM ISNVTEAVSFGDSVFSKVVSEFADHTNEDPLFSTMVNMLTYPSLEFWDGDRSLHLTELNT GFTKYDASLYIQRHGEDYTLQLAYKVAYVTPERANKVLALTAWFLTSDWLSGKTTVANAI KTALNDCDTSQITMLKSY >gi|302034487|gb|GL383264.1| GENE 498 493133 - 493906 233 257 aa, chain - ## HITS:1 COG:RSp0418 KEGG:ns NR:ns ## COG: RSp0418 COG2423 # Protein_GI_number: 17548639 # Func_class: E Amino acid transport and metabolism # Function: Predicted ornithine cyclodeaminase, mu-crystallin homolog # Organism: Ralstonia solanacearum # 1 249 78 338 340 91 28.0 2e-18 MSGIKWISSFPENVDHGLQRASAVIVLNNTDNGYAYAFIEASRISAARTAASAALAVRVL HGAPTSIGVVGSGPIAQTTLHFIKSLYTTAVPVKIHDLNSELVARIVTRHGPECSVVSLE EALGCDLVLLATSAGTPYVPMSVRFQPNQLVLNISLRDLHPETIRTANNVFDDVEHCLKA NTTPHLLEQLNGNRNFITGTLAEFICSEKQLDPDHPTVFSPFGLGILDLAVAQSLYEHVQ ISGDGLRVPDFHGDMKR >gi|302034487|gb|GL383264.1| GENE 499 493859 - 494068 161 69 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MINILRKARNPFNSRHTGLIIDIRWQRYDTISWSIWKPKKITIGTYCISSVMCSINTFNK IDEKRLSSF >gi|302034487|gb|GL383264.1| GENE 500 494123 - 495124 345 333 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 [Streptococcus pneumoniae SP6-BS73] # 2 298 3 299 308 137 33 8e-31 MIAGSIEELDENSQFVRLKNSFPKHDVYAKLEGLNTAGSVKLKTAIALVDSLEKLHGLQP GGWVVESSSGSLGIALSGVCARRGYKLTIVTDVNANSRSISHMRALGAEVEVVQSLDAAG GFLGTRLARVRELVEMPGGPLWTNQYENVANPEVHSKKTYRAIVEELGDPDYLFVGAGTT GTLMGVSRAVMKRGSCTKVCAIDSTGSVTFGGAPSRRYIPGLGASVKPPIFDEKFPLKRY YIDEIDTVRQCRRIAQVEGFLPGGSTGTVLAAFDALRDKIPEGSRVVIIAPDLGERYLDG VYNDDWVMENFGESAFNYAIRPVAHEVKETEGI >gi|302034487|gb|GL383264.1| GENE 501 495416 - 495547 61 43 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRQRKQSSIRTYLRALSRRSGLALSISCGKALLGNVSSDTREM >gi|302034487|gb|GL383264.1| GENE 502 495584 - 495829 110 81 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|327454166|gb|EGF00821.1| ## NR: gi|327454166|gb|EGF00821.1| conserved domain protein [Propionibacterium acnes HL083PA2] # 1 81 22 102 102 127 100.0 3e-28 MERGAVAVVRKASTSSTEKSFETTAKPGSATASTSTPTGCGLVAQTIHFPSCDKLNLGPS RFASSGFPKAFFDTSDCTGTL >gi|302034487|gb|GL383264.1| GENE 503 496235 - 496936 189 233 aa, chain - ## HITS:1 COG:no KEGG:PPA1292 NR:ns ## KEGG: PPA1292 # Name: not_defined # Def: putative transcriptional regulator # Organism: P.acnes # Pathway: not_defined # 4 233 1 230 230 454 99.0 1e-126 MKLMKISSSCELSSYLPLNQLVWHEECETLRLKRLTKLLEHEALRESIHVAQGAPYIILD GAHRCRAAFYLGFDSIPAHVVPMAPEQSVSGWVHVYNTRKFSFMPPLVHGEDRGPTIAIL HDGDLRQEVHSKSDLASDLFYAYWDLAELLGGFYYRRSADVPAQGQSVEWVLPSWGAIAK IATNYGPLPAGITRFGSVFFKKCPRCIAEREKSIMSDPVLDRDEVKSLAVMKD >gi|302034487|gb|GL383264.1| GENE 504 497349 - 497480 72 43 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|328905670|gb|EGG25448.1| ## NR: gi|328905670|gb|EGG25448.1| hypothetical protein PA08_2737 [Propionibacterium sp. P08] # 1 43 1 43 43 77 100.0 4e-13 MASTMVRKLVSELVVAADRFCKPILQALFDVVINDGLLAPKGG >gi|302034487|gb|GL383264.1| GENE 505 497853 - 498224 260 123 aa, chain - ## HITS:1 COG:no KEGG:PPA1293 NR:ns ## KEGG: PPA1293 # Name: not_defined # Def: putative ribonuclease E # Organism: P.acnes # Pathway: not_defined # 1 123 143 265 265 230 100.0 2e-59 MRKRNLLRHEVTNLPHHRSSHTLQFPRDNEDARGQASDLLTEILSEGRGQRMHAKLWIEV DEGGRRELQMVRLGDKGGYDCGFALEDVRMFRDALSWLEDQAGQQYGNVADRGRLVGVEI DVW >gi|302034487|gb|GL383264.1| GENE 506 498642 - 500348 1468 568 aa, chain - ## HITS:1 COG:no KEGG:PPA1294 NR:ns ## KEGG: PPA1294 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 568 1 568 568 1068 99.0 0 MRDDQEQRRPAPHRPPDPETVWLDIDTARGVDAAGNEILPVLGGRRTKHATLSDLLTTAL HHNARRLIVCGNIPDQPQSWLLPDTPAHTREFNQDWHVRGLFMLSGRPARGRFTHKETDR NLDILVADEWFPGQTLTPIQARWAWRELTHIIATRIDRDWALMDRPGAEGINLWKLRTPE SYRMEPMDPELGALIQHTSPQHRYELCVDDGNPEDREKGWRPTVPAGPIPNFVYIDGRFM YAGSVTGEIGAAPATLLSATEARDLFTNNPWHPARYHIRFTVPSWWDDIGLLPVKRTKGR AGWFWPNVPGTTHETWVDTAELKLAIDEGWDTEAGPDGPITQPIEFLEGIKLTKVDPIRG WVKTIQDMIDIAEKRWADKNPTATTILTSALKNMLRVTIGQMSASNPVTTTVVYDADDIP SDIEGFDVIRNKTGDTIAYQYQTARRRPDPDTWHPEIAARIWALSRVRTLNTPIADPTTG KNATTKGGALRMNSRTLLAIHGDAIYTSNVPPWALPVAQGGGDDGKGGRLRVKGVLPGPL EAPQTGSERAALSEQAEQVGLPEEATSD >gi|302034487|gb|GL383264.1| GENE 507 500345 - 500866 426 173 aa, chain - ## HITS:1 COG:no KEGG:PPA1295 NR:ns ## KEGG: PPA1295 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 173 1 173 173 300 100.0 1e-80 MPSYRTTPDGKDYRLVITVTDEVTTCVIERIREGTWVPVQTWNTDVTARTRAPERRLKIT ESAANHGWQVPADAWGPIRHNRIVVKTIHPTGWASVVADATRRRDEALAQLGTIDLAWRD VLADAAAIGHLPATTIAEAAGVSRGRVYQLREEQRERMNALDAGRSLAQRRKP >gi|302034487|gb|GL383264.1| GENE 508 500936 - 501496 205 186 aa, chain - ## HITS:1 COG:no KEGG:PPA1296 NR:ns ## KEGG: PPA1296 # Name: not_defined # Def: putative permease # Organism: P.acnes # Pathway: not_defined # 1 186 14 199 199 353 100.0 2e-96 MIQESWEFSLSWHRSEITEIMAGHLRSALLIPIAAGVEAAIIWALRDWIICGNWPGQGEL AMIGAATLVVVAVIMVALEAHHWRTATWRSWQTTPDWHGGAYVAPPARRHGPMLMCVHAV PRTQGHGSQILTQVCQWADEHGLTLELKPSGPAAERFYKRFGFVKTSRRVMRRECLSGRA DPHKGV >gi|302034487|gb|GL383264.1| GENE 509 501493 - 502137 300 214 aa, chain - ## HITS:1 COG:no KEGG:PPA1297 NR:ns ## KEGG: PPA1297 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 214 48 261 261 418 100.0 1e-115 MGDRPCRRSAMLGGSPQNRAGPLGEMMATRGVVEMVVGSIMPQMCKSWFTHLGRGETVVM DLLKKWLWFRTSTPAVAPSSMKAQKQGETMRINATRTPLPPVRTMTASQLKIGDLVAGHT ADGSYPFHVERADSYDGMVHLRLIEISHASGLTDEQHPGIESVHAPDEPVITLSRHFGVC SECGRLSPCPDELAERRLEKLWQGEAEEAVHTSA >gi|302034487|gb|GL383264.1| GENE 510 501869 - 502384 226 171 aa, chain + ## HITS:1 COG:no KEGG:PPA1298 NR:ns ## KEGG: PPA1298 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 171 31 201 201 332 100.0 4e-90 MVSPCFCAFIDEGATAGVDVRNHSHFFNKSITTVSPLPKCVNHDLHIWGMIEPTTISTTP RVAIISPSGPARFWGEPPSIALRRHGRSPMRSLPSGALLLVWDVTVLTGPTLGHRVRPLS KDAELTARRWLDQVADNPGFLDTLIEAARITDGWHHATPPHIQAPYRTLHQ >gi|302034487|gb|GL383264.1| GENE 511 502401 - 502982 421 193 aa, chain + ## HITS:1 COG:no KEGG:PPA1299 NR:ns ## KEGG: PPA1299 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 193 1 193 193 358 100.0 1e-97 MTSDIDIDRTHKPDDRAEAPLYRSWARRLVHVSGMPWRIVAALAGVSPTSMHRLLFGRNG RPVEWIGINDARALMDIGIDDLASASTDRIPARESRELLVALHTLGWTDEHLSRWLTSSD LDLATTPKALYVTRLSAARIQATYDMLISQPVRRCGHPRTPPISSQTPVTSPQPGPEDAE TFQPALFELADCA >gi|302034487|gb|GL383264.1| GENE 512 502997 - 503542 451 181 aa, chain + ## HITS:1 COG:no KEGG:PPA1300 NR:ns ## KEGG: PPA1300 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 17 181 1 165 165 264 98.0 1e-69 MVESKGSASSQLPGVPVHLYRAVLTHTDIQITVRIWSTTDHDWTWTPLDTWTPDPTPTTP AQLADELHRHGWTTPEDPTTLTKVTVIPENWQALVDHALAARNHQANQLRVAENILTDIL GDAADAGLSVTFLAQAAGLSRAAFYKRSAKTINSMRHADQPREDPSQLTRAEKTALSLGD E >gi|302034487|gb|GL383264.1| GENE 513 503650 - 503955 159 101 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|289425057|ref|ZP_06426834.1| ## NR: gi|289425057|ref|ZP_06426834.1| hypothetical protein HMPREF1034_0478 [Propionibacterium acnes SK187] hypothetical protein HMPREF1034_0478 [Propionibacterium acnes SK187] # 1 101 116 216 216 166 100.0 4e-40 MNGPTGEGNNGCEEILAFIVVGIGGIALLKKMAPKIIGHLGAWLRDHGLLGVPGQGLFDL GLLGSVSASHLVVAVGVLIVVGALGTWFAGWVFARGSRGCR >gi|302034487|gb|GL383264.1| GENE 514 503952 - 504269 246 105 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|282853735|ref|ZP_06263072.1| ## NR: gi|282853735|ref|ZP_06263072.1| hypothetical protein HMPREF9206_1666 [Propionibacterium acnes J139] conserved hypothetical protein [Propionibacterium acnes J165] hypothetical protein HMPREF9206_1666 [Propionibacterium acnes J139] conserved hypothetical protein [Propionibacterium acnes J165] # 1 105 1 105 105 153 100.0 5e-36 MTPVALPSIADLDHAVNNLTDALITATDATETSTDSGWYIESAIEELRTALTEVASLSRA AGAPASLLAGASRAWQAGQVELIETSGQVADNLIGWLAVHPEKAA >gi|302034487|gb|GL383264.1| GENE 515 504371 - 504577 144 68 aa, chain - ## HITS:1 COG:no KEGG:PPA1303 NR:ns ## KEGG: PPA1303 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 68 6 73 73 118 100.0 8e-26 MMSEGLRPVSAALLCPSWLASGADRGVDAAVQDHPADSAHACAFRQGQPRHRFGRVGANL GAVLAEFS >gi|302034487|gb|GL383264.1| GENE 516 504678 - 505067 147 129 aa, chain - ## HITS:1 COG:no KEGG:PPA1304 NR:ns ## KEGG: PPA1304 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 129 42 170 170 233 100.0 3e-60 MTPHQVSTGSSLLSVLVIRGRSCRIGGSIRARGGSVIPLPLITTGGVRTVARCRSRTTSY VGRQYRQAAVLDFNYGSPARHGAESGAAIFLHYATRYTAGCVSMDSLSKLTNTLRWIDPA QNPKIIILG >gi|302034487|gb|GL383264.1| GENE 517 505244 - 505402 112 52 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4344 NR:ns ## KEGG: HMPREF0675_4344 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 52 1 52 52 74 90.0 1e-12 MTPQRRTIFTARIILKRSAKKHRFTEADVLYEMRNALTVEEDFEASRVPKTW >gi|302034487|gb|GL383264.1| GENE 518 505543 - 505905 216 120 aa, chain + ## HITS:1 COG:no KEGG:PPA1305 NR:ns ## KEGG: PPA1305 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 120 1 120 120 162 99.0 3e-39 MTDELDAELAAWAESDAPVTVPGRILRGAAARAAGRRALAWAGYPNVEAGRITRAGTGRS QTGNLRHRQVRLDVVTDARLDDLATKTGRKPADIMRSAISAYLDAAGDTTVYLRDKSRER >gi|302034487|gb|GL383264.1| GENE 519 506139 - 506354 126 71 aa, chain - ## HITS:1 COG:no KEGG:PPA1306 NR:ns ## KEGG: PPA1306 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 71 1 71 71 126 98.0 3e-28 MNSHATSWPRIHKLTKKLRVPISIDINGLYMSITEASVARNVHYFSPVSADDLIRDSIEQ MAAKQRRKNQR >gi|302034487|gb|GL383264.1| GENE 520 506336 - 506821 178 161 aa, chain + ## HITS:1 COG:no KEGG:PPA1307 NR:ns ## KEGG: PPA1307 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 161 1 161 197 331 100.0 6e-90 MWRGYSWPRRSMHHSSAEIDLDSSVLVPKVASFEDEGGDKFVELIDVEGSVHSGGELGGY GVVDVGDRASDTEGKGMQMNFSTWLHVRLGTLEIQTMDLHRRFSRFSTTSNPTYPPKLFR QSCHACGRTHGAHSFPLPIGCKRCRAEHSEQGLQDESIRRH >gi|302034487|gb|GL383264.1| GENE 521 507211 - 507801 244 196 aa, chain - ## HITS:1 COG:no KEGG:PPA1308 NR:ns ## KEGG: PPA1308 # Name: not_defined # Def: putative universal stress protein UspA # Organism: P.acnes # Pathway: not_defined # 1 196 1 196 196 385 100.0 1e-106 MTDHQPVHEQVRVQDQTDHGPRRTPGRYQRSPRGTMKCRPVIVAIMPGIPKPVLETGVEY AKAMGSKIVFAHVATDRVSSPSNPDTSHPLDPTAQRISMETAKSAIYSALDAFMSDYPEA DWELVYLSGLPDQQLAHLAHTINAGCFVLGTRRPGFRAGVQEWLDGSVAVQLGRRQLRPV IIVPLRGEDWKHPLCS >gi|302034487|gb|GL383264.1| GENE 522 507872 - 508414 274 180 aa, chain - ## HITS:1 COG:no KEGG:PPA1309 NR:ns ## KEGG: PPA1309 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 180 1 180 180 323 100.0 1e-87 MTQDPQVAQGVSESADDALIACLTEIERFVASSSWGGPPRLFALVRTVDLVKAEPALAGQ LAIGSHDSLSSIEQDDFRPGEDLAQALATTTWGDAVDGAAICVERIFLPDDCADEIPHDP EKAAAFVAAHPKRQEVRVVAGALRDGSHYGVARLVEHPDELLGSIDLVPALESAVLETLR >gi|302034487|gb|GL383264.1| GENE 523 508432 - 509571 575 379 aa, chain - ## HITS:1 COG:ML0643 KEGG:ns NR:ns ## COG: ML0643 COG3480 # Protein_GI_number: 15827268 # Func_class: T Signal transduction mechanisms # Function: Predicted secreted protein containing a PDZ domain # Organism: Mycobacterium leprae # 39 379 7 340 340 150 34.0 5e-36 MSEPTTPTSQAHDSGASANVIATVETEIRQTVRFPTRWTAISSALVVLLCVLALILVPIP FVARSPGQTVNLLSTNERGKPMIQVDGLTTRHGEGEMRMTTVSITRADSRLSMAEALVAH LRADHDVLQREAIYPPGRSPQQVDADESYMMDTSERDAAVAALRAAGQPVTEMPMVSAVS AAGPAHGKLAPGDLIEKVDGKPMASVLDVGKAVRKHTVGDTVVFVVLRNSSVKTIAVTTV SSVSDRRAPAVGVTIDTGYRYTPTITYNIPGDIVGPSAGLAMALSIYQMVAPNDLIGSLR IAGTGGISPDGNVVAIGGIQEKIAGAERDGAKIFLVPAGNCRDISGVETSMRLVKVSSLK DAIAAIQKIRAGGTGIPHC >gi|302034487|gb|GL383264.1| GENE 524 509667 - 511028 869 453 aa, chain + ## HITS:1 COG:MT3287 KEGG:ns NR:ns ## COG: MT3287 COG5282 # Protein_GI_number: 15842777 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mycobacterium tuberculosis CDC1551 # 33 453 56 462 472 226 36.0 7e-59 MNDGPQNPGQPDPEEMAEQLRRMMQQLGLPVSGDLTSFMTQLSQMFGSGSSVGFGMPGTN PSDGPVDWSHIKDMARHITASHGPDPAPGQQERTVLLDASRLAESWLDRECEFAQVNVQP ACWSRAEWIEHTFSSWQSVVEPVLVSLTEAMTGLMSPGGPNDPMAALTQMMGPVLRRMSA MLYGAQLAQGLAELSTSTVTGSEIGLQVLSVPQVVILPTNIAAAWNDLDLDPRDVELYLV LRESARQRLFNAVSWLGPQLLALVEHYAREIRIDSSAIEDAIDIDDLSQLTPEKAQEMSE RLRGRLFEPTRTPEQDGVLQRLETLLALIEGWVDEVTFQVARTWLPSHDQLAEAVRRRRA TSGPAEVFFQSLLGLELRPRRVRDAVNLWAALREARGTVGRDHVWNHPDLVPTAADLDDP LGYVSGDRQDPSEGGDDLDAELEKLLRDHGHDD >gi|302034487|gb|GL383264.1| GENE 525 511016 - 511642 164 208 aa, chain - ## HITS:1 COG:Cgl0757 KEGG:ns NR:ns ## COG: Cgl0757 COG1451 # Protein_GI_number: 19552007 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Corynebacterium glutamicum # 22 185 2 159 162 111 40.0 1e-24 MMGVMADMAVPDEIIEARDGRPEIIIRRSARRRRTLSARMEGSSVLVMVPMGMRKADQDR QVMELVDKVTKSDARRRHHDSNDELTRRALRLCQKYLDPRVNDTVEPASVRWVSNQNSRW GSCTPSTGQIRLSDRMIGFPDWVVDHVLAHELCHLVEGHHNRRFHELLAGFPNAERAEGF LTGFQWAVSGEADNTRNDPDDNPADQSS >gi|302034487|gb|GL383264.1| GENE 526 511868 - 512122 162 84 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVQVVAHFPHGVARFFAGTYVSSQVLGKLRSCTLNLIVLGSRFQAGYASSLRMAGLSDCA ARRQAPMDMSKSRQKLRITYMKRA >gi|302034487|gb|GL383264.1| GENE 527 512104 - 512358 194 84 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4353 NR:ns ## KEGG: HMPREF0675_4353 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 84 1 84 84 160 100.0 2e-38 MTLLGHIAASEEGAGANNNDMNVKIGMPTDATKIAGVSGLRRSYPRCDVDATRCETPHQI VGTAMITDDRHSKIAGLGGYARFI >gi|302034487|gb|GL383264.1| GENE 528 512458 - 512727 147 89 aa, chain + ## HITS:1 COG:no KEGG:PPA1313 NR:ns ## KEGG: PPA1313 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 89 230 318 318 175 100.0 4e-43 MAMAARDPDWVTMARSMKEGEYDPAVTEWLVNRIERAALSIRDSTVSRRPKTFHVRTIAG ERSIEVPAQPGCHCWLSEEPCSTLMRSAA >gi|302034487|gb|GL383264.1| GENE 529 512673 - 514793 1110 706 aa, chain - ## HITS:1 COG:Cgl0755 KEGG:ns NR:ns ## COG: Cgl0755 COG0210 # Protein_GI_number: 19552005 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Corynebacterium glutamicum # 22 698 4 675 678 410 39.0 1e-114 MLLSVTTLMVIAVRTRTADAILAALDPEQVKVAKTFDVPVCVIAGAGTGKTRAVTHRIAY GAVTGKLDPRRTLAVTFTTKAAGTMRGRLADLGVVGVQARTIHSAALRQIKFFWPRAYNC ELPPVSDSRFSMVAETTHRIGLGNDKALLRDLSAEISWAKVSNVPTDQYASLARAEGRVV AGVSATDVGRVLAGYEAVKRERCVIDLDDILLCAVGLLVQHRDITEEIRARYRHFVVDEY QDVSPLQHRLLELWFGDRNDVCVVGDPHQAIHSYAGARADYLLDFVADHPGAKRIDLVRN YRSTPEIVQLANEVLVNRMTPEEALEHGRGVTLVSRGRSGPEPIYQALGDDASEASAVAM WIESRHAAGIPWSEIAVLYRINSQAAQLETALAERSIPYLVKGSERFYDRGEVRRSLDAL ARLAADEPGADPLRAFDRILAAQGWSAIAPDGEGDVRQRWESLQALHDLTVSVVDDGTRT LEELAAVFSRRAATQEAPVGDGVTLATLHASKGLEWDVVALYGINDTMVPFIMAEAPAEV ASERRLLHVGVTRARRDLWVSYSWSGGNRDRQGISRFLRGLPGTGETTDKPPRHRRKRRA TITVCSVCGKALTAARDRKLGHHLACEVGVDPVLVERLRQWRSERAEADRVPAFVILTDA TLLGVAEKRPNSMESLLQVPGIGRRKADLYAADLIKVLHGSSDNQQ >gi|302034487|gb|GL383264.1| GENE 530 514918 - 518067 660 1049 aa, chain + ## HITS:1 COG:Rv0631c KEGG:ns NR:ns ## COG: Rv0631c COG1330 # Protein_GI_number: 15607771 # Func_class: L Replication, recombination and repair # Function: Exonuclease V gamma subunit # Organism: Mycobacterium tuberculosis H37Rv # 25 809 25 877 1097 207 28.0 1e-52 MAGVVKVFHSWRCVSDAVVAALSEPTTDPFVRPILVAPGNAQSRSLLQSLARRHGIAAGI DTTTPLGLRERLEEDLLGVKRENDPWQPGSLALRICRVIENNSPGFEVVSAHLEASRRQG VPRATWTTARQAADAICALARDSHDVLNAWADGATPTTHQGDTDLAGDPLDPARAWWAPL WRTLLAEPCHVPDPVSRHQLLVDAILTQSRSEPPIVWFSSTTTAQHDVSLAEALSASHDV TIVHLDHGISGADPWRTFDRARSATTARWTSSSICTAQSAVTHRKELPTVEIHQCHGVDR QAEVVRDVVCAALADYPTLEPRDIVVICCGRQDTAHLLSAGTLADIDHPAHQLRFTTPPQ REHVNPVTEAVTTILGLASSRATGQDLLSLCAMPAVQTRFGFSDDDQEAIERLVSQADIR WGVDPAARDKAGLGRIKQSTWLAGIERMILAIAMSSTPPTYLGTVTPITDVGSTTIPLVG KLAELVSRMRKAFLDTETPAPIATWKRRVSQIVDNLAAAPADAPRSALQTLALLTGLEGV AEDREFDRQEIIDLLNWLSGIHRGRHSWFDGSIQVCRPGELTPVDHEVVIVVDPDQEAVH ADLLQGLRDENLDPAAKARQDLLDVALSARTLLVVVRQARSPVSNLTVLPGPFTRTLSQA LKAQSATPRCVKHGLQPFSADEFSHHSDTAWSGFDNTAAAAAGCHPGSQPRPHRVVLPPV AKLPESRMSLIDLTLALSHPARTLLRARAGAPANERSTDLPVDLPLAPSSLDKYWIRSRI LADLEHGFLLDDAINAERLRGSTPPGHLGQHIVTKLAEDAMQICQRANRLRGDQDEQFIE IDFDLDEGNSPPLLWPDELIVDPMHPVHLHGRVGVRNHQIVHAVASRANARPLLDLWVDL LAVTVATDEPGWFGVLVPNGDVLRMASPAPDHARDILAGLARVAWWSNQQLIPLPVKLAH ALVELSPMAHNDYRTGASALQVQWSREWDPNWAAFLGTDVGELIACCHELGTTLTELSEW LFDPIKQALRGAGSSPSTMAQFSNSGRRA >gi|302034487|gb|GL383264.1| GENE 531 518064 - 521300 892 1078 aa, chain + ## HITS:1 COG:MT0658 KEGG:ns NR:ns ## COG: MT0658 COG1074 # Protein_GI_number: 15840031 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) # Organism: Mycobacterium tuberculosis CDC1551 # 7 1073 4 1087 1094 475 36.0 1e-133 MTTNTSFDITQPLPQGTVLLAASAGTGKTWTISAVCAKAIATGLVHMENLLLVTFNRSAA RELRGRVYERLVNTRLLLAGAREPSDPCDWSLIRCGQAGLTRVESALDNFDRAVITTTHE FASRMLVELGVLSDHDPSSVLMTDLAPLATEVSDDDYLAQYLDCDRPPSVRDKRELSRDV AVKYGEVPIFSKDDADTPVQDVLWALSVREDVRRRSKSRSVHTFDDLIGDLVKALRDPYR GPLACATLAHRFGLVMVDEFQDTDPLQWEILRRAFHGHSNLWLIGDPKQSIYAFRGADIH AYQDAAQSASHVLHLDVNYRTDKPIVEAVNTLFSNAQLGHDISMELVTAHHQESRIKTAA TDGPRYHWSQPFQIRCLQAPAGAQLNTATSDQFVTEDLVNQVIMMLEGGTVVQDGDGLRP LRPTDIAILVRTRRRGAELATALSQAHQPAVFSGASPVWSSQAAEDLITLLEALENTDER LRTRLCLSDLIGATPADLAASDSRVRSDLAIDLARWSSTWTMTGVWGTVEAALHRPGVLV RLVSMAGGERYVTDLRQVAQKAHIAACEGRLTATATAAWIREQQQLAGDDEPRRLDSDQQ AVIIMTIHEAKGLGFPVVLLPDITNGWAPKQSINGPIVWHDGQRRVLDISSQGTDRSIAI ESHEEDERGENLRLLYVALTRARSAVRLWWSPCPLRHRWSAFQRLVEMDRTTGELGSGVA GTDPGTLPWLNSGPIATVIAPANQKLLTRSVSAQPRACVVPRTLTRPLDTAFARTSYSGL TANLHAAVSEPMTDGLIDEPVDDETVDDTAPGLCGLPGGTSFGTLVHTVLEYIDTAAIDL SSEVLSITRRALRMSPLPDVPPSELATSLEQVLHSDLGPLAPGMTLADFSPADRLAEMNF ELAMAQSGRSTTMTDLASLLCDPSLVPPDDPISGYGEILAHIPNGDQALRGFLTGSIDAV LRRPDGRHLVVDYKTNRIPGVHKLSPHMYDAHTMRTMMFSSHYPLQGLLYSAALHRFLAS SLPGYDPATHLGPIGYLFVRGMADRPVPDGDMPDGVFTWHPRPELIEAISERLGGLHD >gi|302034487|gb|GL383264.1| GENE 532 521293 - 523179 662 628 aa, chain + ## HITS:1 COG:Rv0629c KEGG:ns NR:ns ## COG: Rv0629c COG0507 # Protein_GI_number: 15607769 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Mycobacterium tuberculosis H37Rv # 7 625 10 572 575 249 38.0 8e-66 MTDLVPVAAGSRLEPFARAGVLEASDIHLANLVCRIGGETNCDVSLAIALSCRELRRGSV FWDPHEIANVVRQQILDPAIPDIETSDQAALFAELEWPPPGEWLSTLEASPVIAGRDDPL NRLPARLDDDLVYLEKYWQAEHDVARDLATLAADPPSQGPVSADDVVSSISNALAASGIM LDPAQADAAIAAIMHRVSVLAGGPGTGKTTTVCALLAALQQADPHLGAVALAAPSGKAAA RLRDSVSQVSERMPDDLKPIVADATTVHSLLKWQGPGTSFGYDEQHKLPFGVVVVDEASM LSLPLAASLLSAIGPQTRLILVGDPGQLVSVDAGSVLADIVSSADALQAQLPVTILTCNH RSRGDIARLSEAVREGDKSTALDVLATAAGVTHDSPSPDSIATISGRRSITWIDADPASI TMADLPAVAEVIARTGARMLELAQASADAAALKLVDAHRLLCAHREGPYGVDEWSQRMVT VLSDVLPGVGQGRWVLGETAIVTHNLAQLGVNNGDCGVIVETRPVPTIALPGPGGVPRRL PCSLIPSLQPLQAMTIHKAQGSQFTDVTVVLPPPDSPLLSRELLYTAITRAREHLTVVGT RESVERAIDRANDRRSGIQRRWEESRTS >gi|302034487|gb|GL383264.1| GENE 533 523210 - 524112 296 300 aa, chain - ## HITS:1 COG:Rv3199c KEGG:ns NR:ns ## COG: Rv3199c COG2816 # Protein_GI_number: 15610335 # Func_class: L Replication, recombination and repair # Function: NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding # Organism: Mycobacterium tuberculosis H37Rv # 6 281 8 309 313 140 38.0 3e-33 MNRISDSRIVGRPLLDRCHADRNDDKANRARWDDPAAQLLLIDPYDKVVMAHDRVVAVPT EGERDDQHDLLLGVVDGVPWFTRRTNEPRPEARSVRAVDLVPVDRELVMSAVAALAWHES NPLCPRCGQSTRVTSGGPARVCPQGHYVFPRTDPAIITAVLDDEDRIVLARQRSWEPHRR SVLAGFVETGEPAEHAVVREVAEETTLTITSACYIGSQAWPFPRSLMFGYVARATGTIDV GHDELAEASFLSRQEVSGQVNAGRLQLPPTLSIARALIDAWLEHRLPEPESGFDLSAPLR >gi|302034487|gb|GL383264.1| GENE 534 524149 - 527367 1448 1072 aa, chain - ## HITS:1 COG:Rv3201c_1 KEGG:ns NR:ns ## COG: Rv3201c_1 COG0210 # Protein_GI_number: 15610337 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Mycobacterium tuberculosis H37Rv # 1 779 1 794 821 324 35.0 6e-88 MTSLIGNAPVDGVDVAALLGIPISAEQERAVQAPLKPCAVIAGAGTGKTTVMAARVVWLV ASRLVSPEEILGLTFTNKATAELSERIESNLTRVGLLTSEQPRPTVATYDSFAGTLVNDY GAWDGISTGAHLITGARAYQLAAEVVMGLDKAPLAATHMGPTFIAQAVVKLAGAMASHDA SPGKVRRADARWRQMLLAAPTKRGGDRYADIDKWLSRVDEREELLDLVAAYQNLKKERGL VEFGDRMVQALHLVTHHPRVGEELRARYRVVLLDEYQDTSSAQADVLAALFSGPDSAHGM GHPVMAVGDPLQAIYEWRGAAASNILEFHRRFPNKEGTPAQVLSLATNRRCADQIINAAN VASEELRQTLSSAVESGDHDPADDRAEVAVGQPLVAPEGNRRGEVTVAAYPDWVKECQAC ADILVEAKERGTIARWSDAAILVRRNSDVADLYDSLTARDVPVRFANLSGLLRLPDIAMV VAHLRVLVDRQDDAAMATLLAAPRLGLSTDDLAMVYRRARALAKARAKDDGLDLDDVEIH LSDAVMEGRPGGHERLQCALKRVCAEIVEVDAHRADSPDDLVLRIEAITGLVDDMAADDP HRSAARRDHLDALWNAIREARRSDPTMTIAGIVTWLAAEEDVGDGLPRAATDDRDAVTVS TVHGAKGLEWPLVIIPDMAQGVFPSTSTPDNFTSEAAVLPSFARGDASDISHPLSGSVVD TKAYVAALKEDSQWAEARLAYVALTRAKERLVVSWHQWRPRRKGSLGPGRYADLLADMLG TVWPDFGERPDDDIQAGTPWPVFAKDVGHGLIDNTSRSVDDPGQADRVKAWRTDADTLLK DARRHIDLQDEVALPPRLTTSQIVRLHANPQAFRDDLRRPMPRPADRGAGIGTAFHEWVS QRLAPAEPIPLFDAEEIAELDEESITQEAVAVEPSGAENRALRSLCQAFEESRWAGATVL AVEKSFVMTIGQTVVRGRLDAVVADPDHPGDELVIDWKTSPPRSADPLQLSIYRLAWAQA RGIDPSRVRAVFHHVGANETISAEPLLDADQVAAILTASSSGNRPTKNASDA >gi|302034487|gb|GL383264.1| GENE 535 527364 - 530549 698 1061 aa, chain - ## HITS:1 COG:MT3296_1 KEGG:ns NR:ns ## COG: MT3296_1 COG0210 # Protein_GI_number: 15842788 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Mycobacterium tuberculosis CDC1551 # 20 695 19 700 803 189 30.0 2e-47 MCVMHGWDGLQTRVLADDAGTVLVMGGPGTGRTSVCLEIAARHVAFGGRLSEVLVLAQTR PSAQALRTALVRRLGGAHLDPQVMTVHALARRIVASPSKRLLTAPEQEFRMRELLAARDM SDWPEELRTCAGTAQFASDVRVMASRLRQEGCDPQDLTEAGTASGVPEWRVLGPFLADYL DVLDLEGSLDYAEAVHRARIALTRPGADVEVRSRIKLLICDDLTECDPSQVRLLAQIARC HVPCVLTADPDQTIYGFRGAVAERLDEVIDEFPDVSVHHLTTNYRNSQHIAEVVESLRTG MPVMPSSSRLRRRANHSTSTEAGTVAALRAPSITRLVRKIAGTLRHARVADGVAWRSMAV VTRHGGELDVIATILAAEGIPVLRSRDEYALSDIYAVTHILNALEMAVALASGAQPSARD VATLLANPLAGIDRSVIHRLETWCRLVRGVDVDWALLKELGADPTITAAGKSERTDDASR SEDASTAELDTVCEVYSVPPGLRALAQPLAVMTQRVQRAADLLRSGATCHEALWALWQGS SWAASLRSRAVAGDSTANRDLDGLCSLFDMAESAQTMAGIAGGQRLIEVVRQEQIPADRA RESDEDRDGVNVVTAHRIKGREFDVVTVCGLEEGNWPAGNHTGSLVRADRWSPDGLVAAP GWSENLRAETRLLLVACSRARHQLLLCSVDSAEEGKRPSGLVAGLSHIEDNADSLSFTSL TELVGELRRVIADESESPGVRAEAQALLDDLRNEEHHGRRLVPQADPATWWRQGVPRQAD MAGEIELSASHIGELLTCPRRWFMTRRAGASSGSALRASIGSLVHRICAGNMDQWSLPEA LAELEAAWPEIELSAEWQRSAELADAKAAVQRFDGWLQLRNRQLIGTEVRVDGTITVPSG TARVRGSIDRLERDAEGAYYVVDLKTGTSQSDEIKQSHRLQIGVYQAVVASGGVEAIGPA SVSGAELVHLRIGAGIGQANPKVDYQSGLVDVPWPDEAEPVDGCCNWVEASVDKALRIVT SGEYPAIANRGCGHCPARAGCPALVPMDPATVGSDRRRNVP >gi|302034487|gb|GL383264.1| GENE 536 530619 - 530795 65 58 aa, chain - ## HITS:1 COG:no KEGG:PPA1321 NR:ns ## KEGG: PPA1321 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 58 1 58 58 98 100.0 8e-20 MFSAWTLGSRIVLTLVVCQWWMDIYRHVHSELFGARMCLIRMRQQLHFFISQAAAARK >gi|302034487|gb|GL383264.1| GENE 537 530817 - 531674 494 285 aa, chain + ## HITS:1 COG:sll1033 KEGG:ns NR:ns ## COG: sll1033 COG0631 # Protein_GI_number: 16329363 # Func_class: T Signal transduction mechanisms # Function: Serine/threonine protein phosphatase # Organism: Synechocystis # 43 282 424 656 668 63 24.0 6e-10 MNKSDQSYTVTPGTAATLRVDLTDAAAARGDVACASHIGLRHETNQDAAALGIDGSGHHI VLVVADGVSSTEGAEECARVASHTARDYLAATMDQGLPINDDDTVTLFERTFQKAHEAVV SGSGPIGACTLAAAVATHDRIVVGNIGDTRTYWFPDDGDPIRLSIDDSMAQAQMDLGLSR KEAERGIGAHAITKWIGASATDVAPRVMAYKPQQSGWLLVCSDGLWNHVPDAGDFARLMA DLVSKAHTDDHGHASPAGVADGLIAYANNCGGHDNITVALWRRDS >gi|302034487|gb|GL383264.1| GENE 538 531696 - 531923 271 75 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4362 NR:ns ## KEGG: HMPREF0675_4362 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 75 1 75 75 132 100.0 3e-30 MEIKIGIVNAAREVSIDAQESAETIEQQLRESLAQPNAVLTLTDAKGRKVLIPAHGIAYL DLGQPNSRQVGFGTL >gi|302034487|gb|GL383264.1| GENE 539 531964 - 532530 391 188 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4363 NR:ns ## KEGG: HMPREF0675_4363 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 188 36 223 223 356 100.0 3e-97 MALAPGLAERFLIVDRSAEIQRILAEVRTRLADRETLAEVEPLIGSVEEYVPAQDWSQVL LRDHIVVSLISDFLDRVEPNLEPQLRPRGGSFGPWLGRSTGNRVRWDAAMRQVLAAHQDK SGDSLFARRLVGEVLSVAQRLFARHQSLTSALTQAGGGEFDDLDLINEVMAGVLGAHDQR MIELGLEP >gi|302034487|gb|GL383264.1| GENE 540 532661 - 534355 980 564 aa, chain + ## HITS:1 COG:ML0811 KEGG:ns NR:ns ## COG: ML0811 COG0513 # Protein_GI_number: 15827355 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Mycobacterium leprae # 30 520 7 514 544 449 49.0 1e-126 MRGKMIDGVSNAYLRWSTPDVALNDVTRTTPGLDGPTHEEAKTLTETTVSVPTSFANLGV REDICQALEGVGIVSPFPIQAMSIPIAVEGTDLIGQARTGTGKTLAFGITILQRITLPGD EGWEELTTKGKPQALVMCPTRELALQVSKDISTAASVRGTRVLTVYGGVGYESQIDALKA GVDVVVGTPGRLLDLSQRKDLDLSHVRIVVLDEADEMLDLGFLPDVENLIGRTPASRQTM LFSATMPAPIMALARSQLRRPVHVRAEGADTQTTVPDTQQFVYQAHPLDKIEIIGRILQA NDVEKVIIFCRTKRACQRLSDDLDDRGFKTRAIHGDLTQVAREKALKKFRHGEATILVAT DVAARGIDVTGVSHVINHECPEDEKTYVHRIGRTGRAGAKGLAVTLVDWADVTRWKLINK ALNLELSEPVETYSTSPHLYTDLDIPEDAQGQIIDPEKAATEKKRRQHRHGHDGSHHEKA TRRHSRDASKDGDKARRKRIRRRNGKVVRGSSPNPVAQPPHQKANQNRHAANSNHHDIVA GPREARPRHRRARNALHNRPSNRL >gi|302034487|gb|GL383264.1| GENE 541 534497 - 536005 931 502 aa, chain + ## HITS:1 COG:ECs2057 KEGG:ns NR:ns ## COG: ECs2057 COG1113 # Protein_GI_number: 15831311 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Escherichia coli O157:H7 # 41 489 40 490 516 412 48.0 1e-115 MTHTTQRSHEGNPQGPKVTATRDDPRAATIEEIQPIVDRGDQGYAETLTNRQVQMMAIGG AIGVGLFLGAGSRLRSAGPAVLISYAFCAVIAFLVMRALGELVIHRPSSGSFVSYARELL GDRWAYAVGWMYMLNWMTSGIAELTAIGTYLQFWWPSLLMWVPSLVALMILVSVNLISVK AFGEFEFWAALLKVVALTAFIIVAIGLVASHVNVGGHRAAVSNLWRFDGGFAPQGVLPLI LVIQGVIFAYATIELVGTASGETQNPRKVIPKAVHAVVFRLVVFYLGSLALLAMLLPYKE YSADESPFVTAFSAMGVGWIGDAMNIVVITAAFSSVNSGLYATGRVLKSLAAAGEAPKFA GTLNRFKTPSGGILMTASVFLLGVGLEYVVPERAFEISINTAAVGVIWTWATIFWCQLVL RRQVNEGRITDSGFHMPGYPITGIFGIVSLAGVTALMVLDPQNRIVLAASLVYIAVMLVA WPAVKRNKARHPELNAQEDITF >gi|302034487|gb|GL383264.1| GENE 542 536069 - 537160 1036 363 aa, chain - ## HITS:1 COG:DR1093 KEGG:ns NR:ns ## COG: DR1093 COG0180 # Protein_GI_number: 15806113 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Tryptophanyl-tRNA synthetase # Organism: Deinococcus radiodurans # 38 361 25 348 351 218 45.0 1e-56 MTSDVPGIGSNAATLARSQARSDKVEADLAVHPDKWRILTGDRPTGSLHIGHYFGSLANR VRLQSKGIESFLVVADYQVIYDRDGVGDLQANVMSNVADYLAIGIDPALTTIFTHSALPA LNQLLLPFLSLVTDAELRRNPTVKDELATSERPMSGLMLTFPVHQAADILFCKANLVPVG RDQLPHIEQTRVIARRFDERYGRAEASKPVFPEPEALLSATPHVLGLDGTKMSKSKGNAI ELGMTADQTAKLIKKAKTDADRHITWDPENRPEVSNLLLLTALCEHDDPATIAEEIGDGG SGTLKKRLTASLNDYFAPIRERRAELAADEGHLREVLRDGNAKAAAVADQTLAEVREAMK MVY >gi|302034487|gb|GL383264.1| GENE 543 537307 - 538167 300 286 aa, chain - ## HITS:1 COG:BH2283 KEGG:ns NR:ns ## COG: BH2283 COG0613 # Protein_GI_number: 15614846 # Func_class: R General function prediction only # Function: Predicted metal-dependent phosphoesterases (PHP family) # Organism: Bacillus halodurans # 4 250 8 255 290 181 43.0 2e-45 MRIDLHTHSTISDGTDSPTRLMMKAAGSGLDVVALTDHDTFDGLEEAQAAGQRFGVRLLP GFEMTCHIGGRDVHLLGYGARPDDPVLGRELQATRASRAGRLDAICQRLSDAGMTVTIDD VHRTSGSASSLGRPHVADAMVAKGYVEDRDEAFRDWLSDGKPAYVPRRSVALEEGIDLIH NAGGVAVLAHPWGRGAQQDLTPQVIASLSAYHQLDGIEVEHQDHDQVARRMLFDLGGRLG LVRTGASDYHGSGKKDHQLGCNVTRETAYRELVTRIQLRGGVLRVR >gi|302034487|gb|GL383264.1| GENE 544 538164 - 542774 2341 1536 aa, chain - ## HITS:1 COG:VC1492 KEGG:ns NR:ns ## COG: VC1492 COG2902 # Protein_GI_number: 15641501 # Func_class: E Amino acid transport and metabolism # Function: NAD-specific glutamate dehydrogenase # Organism: Vibrio cholerae # 62 1480 95 1536 1613 1009 39.0 0 MDEVIPALVAAVQEQHATGDHYRDDAIRQAMEHQAQLALRPGPVRVDVIVDPPWSDGQIN SVQVVTGDRPFLVDTVASCLLRHGWRVEDVRHPIIGVKRDRGTIEAVGMPGRGGCASESW IHIDATAPLGTDIGQAAEQLRDDLCACLDQVVCATDDWGAMHEAMLRTAELVSASSGPAD DRDSSRELLEWLADDHFMYLSYQEFTVDGETMTPVAGTHLGIAEEGPRFDAVPHNDDKAT VIVTKDSVRSAVQRNGYRDYIGVRIRDEHGAVVAEHRFLGLLGSAAYTESVAHIPVLRGK ASRILALSGYRANSHSGKAVVRTIAEFPRDDFFEASAEELVPLIMAVVDLREKQRLRALV RRGPWGRFFHLLVFVPADRFDASTVGVVEGIVAKRTGAVEVDSTTMMGESSLVRITVTAK VADGQVLPPIDDEKLQAELADATSNWDDEFITLASGIPSNRRGVDFGPEYKQEFTAKQGI LDLELLNGLAEDDLGLVMYRPDDPADPSDLRLKIFNQRAPMTLSQVMPHLSSLGVQIIDE HPHRIILRGREVWLFDLGLQTPGELWKVAGRRRFTEAFAASWKGECESDTFSGLVTEAGL SWSQVAMLRCIARYLRQLGSPFSQTYMARALRANPNLARDLVGIVEAKFDPTAFDDGVDA GPQRLAKVEELSESFLTDLEEVASLDHDRILRMMHAVIRAMIRTNWWQSGRRALAFKVRP TDLGFAPAPRPKFEIFVNSPRVSGTHLRFGAVARGGLRWSDRPEDFRTEVLGLVKAQMVK NSVIVPAGAKGGFVPAHLPDSTTNRAEWAAEGKECYRIFVSSLLSLTDNVVEGKVVAPED VVRHDGDDPYLVVAADKGTATFSDTANAIAAEHHFWLGDAFASGGSHGYDHKAMGITARG AWESVTRHLADLGIDQATEDFTCVGIGDMSGDVFGNGMLLSRHIKLVAAFNHRHVFVDPN PDPEASWQERRRLFNLPRSSWGDYDSSLISEGGGVWDRTLKSIPVSPHMHEALGIDASVN RMTPDDLISAILRAPVDLLWNGGIGTYVRATSETDAQVGDRANDPVRVTAKDVRAKAAGE GGNLGWTQAGRIEYARNGGRINTDFIDNSAGVDTSDHEVNIKILLDAEVAAGRISEQERD ELLPAMADDVASLVLRHNHSQNLALANALSSDGPTAGVLEAWMCELEESGHLDRAVDTMP STTEMNRRMAAGERLASPELCTLLAWTKIALCDAVLATDLPEDPFVADRLVGYFPPLLRE RFTERMPTHRLHREIITTEAVNRFVDSQGITAYYRLHLQTGADIAQVIRCQLAARSVFGL GRVETDLTHLGLDAVRTAKIRLALTDLAMHTTRWFLNHGGADDIAGTIETYRPGVATLVE KLSERLLGDSADAWQEKVDEVTELGLDRSDAAVVAAYDWSPVLLSIVEISEEGHSLDEVA DAYLTLARRVDMIRLTRLVEQLPQDRPTDARVRASLREDLLRVMSDATRRALVIGTDNVL ADGGRIVKSIAANPDLAHCVVMVSDLRSAVGQEVTL >gi|302034487|gb|GL383264.1| GENE 545 542926 - 543399 350 157 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4369 NR:ns ## KEGG: HMPREF0675_4369 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 157 1 157 157 279 99.0 3e-74 MDINSRAHFDATPDQVVAMMTDPAWWQDIHRRGGGTTSNAVVTGDSLSLDVAMPAPSQIT TFVGSTLTAKQTLSWQPAGPNGSREGTLQIVPQGMPAKADGHASVRPDATGTEVIYTGTF TVSVPLVGKKLEKAAAPHITQAFNMQQDAGNDWLASH >gi|302034487|gb|GL383264.1| GENE 546 543432 - 543965 306 177 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4370 NR:ns ## KEGG: HMPREF0675_4370 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 13 177 1 165 165 290 99.0 1e-77 MDLRPRRPRRVQLSTSTIVFIPTSAERAHQLVAAPGKQVTAFTVTEELQSILDVTDPEET EHAAMVIGSVWGLTHTGRRLVLVAHVPPEQITDHEEVDNGGVTLTHLEPSQITAWFADDD DAHSREAAEAVKGMTIDDAWNDVTIQTLIGEHELSWHDVTEELPAVSTDPEGFRGLE >gi|302034487|gb|GL383264.1| GENE 547 543780 - 544634 151 284 aa, chain + ## HITS:1 COG:no KEGG:PPA1332 NR:ns ## KEGG: PPA1332 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 14 284 1 271 271 521 98.0 1e-146 MLGFLRIGDIKDGLQLLSNRESRYLFPRCSNELMSPLRTGRDEDDGGCRQLNPPWSAWPQ IHDPRYSSASKNHILVRDIPDDGTIRSPELSTDFPNNPSAYGISCVVLGYMTTTSSPIPL NSALVDHSGIFLELDRDWWPDELCIVSSAPTLSRNGDDSQARYEAVRLTRAAHIIIVETM AGRRPMSQLVKASSTRAVATMRRWPRGPGWSRMLLVGEPRVSYDDNRVDGVGLLDLRGRR LPLATSLILEERAWRLDAVELVLNPKVATLLTLKKITCETVGLG >gi|302034487|gb|GL383264.1| GENE 548 544677 - 547382 2198 901 aa, chain - ## HITS:1 COG:ML0779 KEGG:ns NR:ns ## COG: ML0779 COG0653 # Protein_GI_number: 15827340 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecA (ATPase, RNA helicase) # Organism: Mycobacterium leprae # 3 874 1 906 940 1021 60.0 0 MNLMDRVLHAGEGKIIRRLNRIVGQVNSIEEDYVAMDDDELAGQTADFRQRLDNGESLDR LLPEAFATVREASKRVLGKRHFDVQIMGGAALHQCNIAEMKTGEGKTLVGLLPAYLEGLL GEGVHIVTVNDYLARVQSEQMGRVHRFLGLSISAILSDMPPMARKEAYKADVTYGTNNEF GFDYLRDNMASSLSECVQRGHHYAIVDEVDSILVDEARTPLIISGPAEENKQWYPEFAKI VSRLERDVDYEVDEKKRTVSVLGHGITVVEERLGIENLYESANTPLIGYLNNAIKAKELF HRDKDYVVVGGEVLIVDEHTGRTLAGRRYNEGLHQALEAKEHVEIKDEYQTLATITLQNY FRMYDKLAGMTGTAKTEESEFQKIYGLGVIPIPTNRPMIRKDQKDLIYRTEDAKFDAIIA DVVERHEAGQPILIGTASVAKSELLSEKLKRAGVPHKVLNAKHHESEAAIVALAGRKGAV TVSTNMAGRGTDIILGGNPEFLTELDLREKGLDPLEDQDAYQTAWNNTLAKYEEQSQAEH NEVEGLGGLYVIGSERHESRRIDNQLRGRSGRQGDPGESRFYLSLQDELMRLFKPEVIDR AMVTLKMPEDMPIESKWVSRQIESAQKQVEAQNFEMRKNVLKYDDVMNRQRHVIYGDRRK VLEGADVEAELRATTDRVVEAGVRKYAEGYSEDWDLDAMWNEIGTVYPVGLDLDEYADCQ DVEELIEDFKADAQEAYDRRESELGEATMRQLEREVLLTVLDRKWREHLYEMDYLREGIG LRAMAQRDPLVEYQREGGDMFNSMMDSFKEEVVGFLFNLEIETGPQVGLVTDDGGNPVTA DSVLPKGNRPRRALTYSAPDEQGEAETTSEGGQKPRGEGTRAARRSAASKKPKNRRNKKR R >gi|302034487|gb|GL383264.1| GENE 549 547733 - 548344 425 203 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119715673|ref|YP_922638.1| sigma 54 modulation protein / SSU ribosomal protein S30P [Nocardioides sp. JS614] # 1 201 1 204 207 168 43 4e-40 MEVIVSGRHCHVSDDVRAQVEDRLSGVEKLKDRVQRAEVVFTAQGTKGPKDQAMTCEITL RAKGPVVRAVGQAEDKMVAFDMAADRLRTQLVKAADRRRSRRGLRVSQVLDVLPEESTDD APDILTTRTIAGDVEVTGDSPIYVKEKIFQAVPLTLAQALDEMELVGHDFFLYLDQDSKR PSVVYRRKKGYNYGVIHLDLDHE >gi|302034487|gb|GL383264.1| GENE 550 548184 - 548519 74 111 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313771849|gb|EFS37815.1| ## NR: gi|313771849|gb|EFS37815.1| hypothetical protein HMPREF9574_01761 [Propionibacterium acnes HL074PA1] hypothetical protein HMPREF9575_01788 [Propionibacterium acnes HL110PA1] hypothetical protein HMPREF9593_00396 [Propionibacterium acnes HL046PA2] hypothetical protein HMPREF9609_00589 [Propionibacterium acnes HL027PA1] # 54 111 1 58 58 105 100.0 8e-22 MAWSLGPLVPWAVKTTSARWTRSFNFSTPESLSSTWARTSSLTWQCRPETMTSMTTSCAG VCIGLSDADTKGTTVFHPLMRDPGAVRSCHASTLAQTGRSQQMFGKLQRAQ >gi|302034487|gb|GL383264.1| GENE 551 548563 - 549210 158 215 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4374 NR:ns ## KEGG: HMPREF0675_4374 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 215 1 215 215 399 100.0 1e-110 MNTLESLADLFLGACCPGCTAPGIGICQACLEAVNPAPRVILDGPPPIIACMGYHGPIPG IVTAHKDRGATWLTDQLGQWLACGLAPAVAAAPGHVDVVPVPSSRRAVRKRGADHAADMT RSALEWLKVPGATVNQLLHRTRQVADQLEVGDEQRGVNQRGSMRADSGSGDVIIVDDVRT SGATVEEACRALTRSGRQVLAIVVLADAATATRWP >gi|302034487|gb|GL383264.1| GENE 552 549252 - 550928 557 558 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4375 NR:ns ## KEGG: HMPREF0675_4375 # Name: not_defined # Def: putative lipoprotein LpqB # Organism: P.acnes_SK137 # Pathway: not_defined # 4 558 37 591 591 979 100.0 0 MLSRAAARESIDVAPHPPADGASIDLVVGGFLQAMASVRDDYRVARSYLTSDIADRWDPH AKVTIYDATNHKPASTVATAALQAPVVGQIDSRGHYHPTSSQTLNHDFGMAQESGQWRIS RPPEGVLISQYTFQRSWSTIPIYFLTEAADRLVPDVIHLPSAAADPDAALRAMTAGVPEP LDAVLRTALPDGVTVTGTTSVDAVGVVTVPLSASAAQLSPSQRRLLASQVTWTLNGFAAI SRIRFTAGGSLLSLPEAAEDQSVSADLYAEFIPFPATHSPTVVAVIKGQMGRVAASGHNF RIMPGALGRGATTNNSVAEVASTQFTMPMISPRSPGAIWHAVSADRRSLLTWQEGSEDIQ VLATGVNLRRPQVLRDHSIMTFSDTDPTLIVVGSDGARMSTVVDLGGCRVTSFSVAPDAV RVALVLERGKTRALGIGLLSRQEGAVHLSHITDIPLSSSDVNLSIITDVAWLSQTRLCVL GRAIDAGVTTPYEIVVDGSGATSMGQLTATSMAAVVALPTEMGTEAVVLCEDGTLLLHEE SFRWRQILQGVNAVAVTT >gi|302034487|gb|GL383264.1| GENE 553 551025 - 552503 1007 492 aa, chain - ## HITS:1 COG:ML0774 KEGG:ns NR:ns ## COG: ML0774 COG0642 # Protein_GI_number: 15827335 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Mycobacterium leprae # 4 480 50 532 562 296 38.0 4e-80 MSSSLVILIVGGFFLVRQATAGIVEAKRTSAVAETTATINRIQGQLRDTDLRTASFYERL NLLADHAASQSDQYHVLIQGPVSGLISQGVSPDSVPTDLTATVGESNGMWTAPTTVHYTD HVRPDVPGIVVGSTLWSPEASQSIPVYFIFPETQEVAAVELLRRSVISVGALMALAIAVT TYLATRHISLPIRQASITASKLAKGALDERMVVRGTDDLATLASSMNDMAAQLDLRIGEL EKLSSLQQQFVSDVSHELRTPMTTMRMASEMVEANPDDPVQVRSVELMRDQMERLELLLA DLLEISRFDAGAAQLSLEDCDIVDLVRSEISDVTPLADRLGVSIVLVAEAAQTAEVDPRR ISRIVRNLVSNAVEHAERKTVEVTVVGNDCAVGVAVRDHGVGFEAWQAEKVFGRFWRGDP SRVRTVGGSGLGLAISRQDANLHHGWLTAWGRPNQGAYFRLVVPRQPGGVIVKSPLPASP TDADRSDDEEER >gi|302034487|gb|GL383264.1| GENE 554 552620 - 553330 588 236 aa, chain - ## HITS:1 COG:Cgl0731 KEGG:ns NR:ns ## COG: Cgl0731 COG0745 # Protein_GI_number: 19551981 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Corynebacterium glutamicum # 10 228 5 221 226 248 59.0 9e-66 MDAAGDHGPILVVDDDAALAEMLQLVLIKEGFSTAWVGHGSDVMDVFREHRPALVLLDLM LPGRDGIRICQDIRRESGVPIIMLTARTDTPNVVQGLGAGADDYVCKPFRSAELIARIRA RLRTPVSRREEGEVITVGDLTIDPVAHLVQLGGEEISLTPLEYSLLVTMAQYPNRVFSRE TLLREVWGYTNITDTRLVNVHVQRLRSKVERNADHPQMIVTVRGIGYRINTPGEES >gi|302034487|gb|GL383264.1| GENE 555 553395 - 553973 349 192 aa, chain - ## HITS:1 COG:MT0043 KEGG:ns NR:ns ## COG: MT0043 COG1678 # Protein_GI_number: 15839415 # Func_class: K Transcription # Function: Putative transcriptional regulator # Organism: Mycobacterium tuberculosis CDC1551 # 7 184 16 194 202 120 40.0 2e-27 MDLVILANPLKVGDLLVASRQIDEGIFYESVVYLIDVALDGVLGVIVNQPCTAGTLHRQL PGWVHLATPPQDLFLGGPMSPNGAICLARVQRSSEEPPGWRRVQGLTGLLHLDTPTELVE GAFTDVRIFAGYAEWVPGQLEAELIRGDWIRAVAHPEDIFSSEPRGLWRAVLHRQNGPAA LLATATDTPALN >gi|302034487|gb|GL383264.1| GENE 556 554473 - 555330 876 285 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4379 NR:ns ## KEGG: HMPREF0675_4379 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 285 1 285 285 461 99.0 1e-128 MKVKFLAAPLIVGALMAPAAFSGATAYAAPVAPIVAVSATQPNKTLSVAEAQKELQVVNA RIASLLDTQKSAKEAFAPANVLNIIGKLLETARRIKEALVNVIKGGIAFLKSIPTRVELL VTMVDTVNGAAHTLQDKAQPAHSHVFLELVHASVLLVTVSATSDQLKDEMAAVKKALAEA QKMPDLKPNDVATFYTKTKLSRVLRQIRFDRNTCVLPFKRLGTIYFMSRALLKATGVLME PLVRVSEVDQAITDVKAAYQDALKAPNRLLTPAVPSVCLPAPAAS >gi|302034487|gb|GL383264.1| GENE 557 555447 - 555788 173 113 aa, chain + ## HITS:1 COG:no KEGG:PPA2385 NR:ns ## KEGG: PPA2385 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 113 31 143 143 214 96.0 1e-54 MSGNSTRKLVTYRLSLRETSYLCIFLSYSVYPCQTQDDGCHIPFLVNLREEEMPRYMFHP VITNATTIYPRTAGTSLTMPRFWIPIVALIRASGASSRICHLNNSIHPCPLHG >gi|302034487|gb|GL383264.1| GENE 558 555796 - 556113 170 105 aa, chain + ## HITS:1 COG:no KEGG:PPA2386 NR:ns ## KEGG: PPA2386 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 105 24 128 128 190 99.0 2e-47 MEVRCILEDTVVHHARLHTHYISIEICSNSNSDASFASRPHAYIHEQWLSPRCGCRREDR ILARDICTRHHVPTRKLSTAQIRADMAGIYSSAPHKSDHDDDPGP >gi|302034487|gb|GL383264.1| GENE 559 557516 - 557767 211 83 aa, chain + ## HITS:1 COG:FN1248 KEGG:ns NR:ns ## COG: FN1248 COG4283 # Protein_GI_number: 19704583 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 1 80 25 104 204 85 48.0 3e-17 MPRPTTKSELLAAASASFKKLTTLWDGFTPEQAHAPFPAALLTGGTEAHWQRDKCLRDVV IHLHEWHNLVTVWVSANQAGTLS >gi|302034487|gb|GL383264.1| GENE 560 557706 - 558044 216 112 aa, chain + ## HITS:1 COG:FN1248 KEGG:ns NR:ns ## COG: FN1248 COG4283 # Protein_GI_number: 19704583 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 20 108 111 199 204 94 46.0 3e-20 MNGTISSPYGSVPIRLAPSPEPYTWRNYAALNEQFVRQHQNTTYEAARDLLAASHQHVLG IIEGFSNDELFTKKHFGWTGTTSLGSYFVSATSSHYEWAAKKTRTYARILAR >gi|302034487|gb|GL383264.1| GENE 561 558341 - 558619 109 92 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313801542|gb|EFS42787.1| ## NR: gi|313801542|gb|EFS42787.1| conserved domain protein [Propionibacterium acnes HL110PA2] conserved domain protein [Propionibacterium acnes HL063PA2] conserved domain protein [Propionibacterium acnes HL007PA1] conserved domain protein [Propionibacterium acnes HL086PA1] conserved domain protein [Propionibacterium acnes HL002PA2] conserved domain protein [Propionibacterium acnes HL053PA2] conserved domain protein [Propionibacterium acnes HL027PA2] conserved domain protein [Propionibacterium acnes HL002PA3] conserved domain protein [Propionibacterium acnes HL072PA1] conserved domain protein [Propionibacterium acnes HL038PA1] HNH endonuclease domain protein [Propionibacterium acnes HL096PA3] HNH endonuclease domain protein [Propionibacterium acnes HL099PA1] # 1 92 1 92 92 152 100.0 1e-35 MPVKPKRLCSHPGCPDFTSDGFRTAYVKAEDVCYRRFQCDSAINKRYDHRWRERPGRSRH GSSVVRALRSGRTGNTRARCGPRHPSREGWRP >gi|302034487|gb|GL383264.1| GENE 562 558754 - 558978 124 74 aa, chain + ## HITS:1 COG:no KEGG:PPA2388 NR:ns ## KEGG: PPA2388 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 74 13 86 86 125 100.0 7e-28 MLSLLLGSCTHTDMVQTNSIVEIIPPSHHDNNWAASHRNETRIRADPSITDQAARAKSVR VFSALIDSQRSLTS >gi|302034487|gb|GL383264.1| GENE 563 559130 - 559270 175 46 aa, chain - ## HITS:1 COG:no KEGG:BBPR_0959 NR:ns ## KEGG: BBPR_0959 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 5 46 124 165 166 62 66.0 5e-09 MKSGVTAGDFWLWAVLGGFIIVGPFIFMHKFLHAVNALAADYNVRG >gi|302034487|gb|GL383264.1| GENE 564 559274 - 559528 207 84 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4387 NR:ns ## KEGG: HMPREF0675_4387 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 84 1 84 84 157 100.0 1e-37 MGTFDTNRSLLKYILLGIITFGIYDVWVLARAGEDLNVIASRWDGRRTMNFWLVALVISP LTIGIAMYIWMHQVCGSIGREQNR >gi|302034487|gb|GL383264.1| GENE 565 560403 - 561005 398 200 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4389 NR:ns ## KEGG: HMPREF0675_4389 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 200 1 200 200 370 100.0 1e-101 MNSWQTWQTGKDGWLVNDVDRDRVVAFLRDAYVDGRLSPDDFDDRVTRALGAVTRADLNA ALTGLAVVGGQAHGSRIAAGETLAAGVIGLSPLFLGPLGPMLGVAISPRGSWIRRQAAQQ ANFQLVALLLAIVVLGVAVKTNLMIVTFPFVGMAWFAGTIMHAAKAFEGIEWTNPLLRVI PLRFFDDGRRRAVGSLSRGR >gi|302034487|gb|GL383264.1| GENE 566 561104 - 561628 297 174 aa, chain - ## HITS:1 COG:no KEGG:PPA1345 NR:ns ## KEGG: PPA1345 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 174 1 174 174 357 99.0 9e-98 MNWGTDDSSLRVTNEQRDRVLDHINDAYAHGAIDDMERERRTETALLARTRCELDESYRN LPSFKPSVPEGIRTPLPDIPDKRPTTGVGLCGLSALVSGPIGPAVGFALTAQGSWAHSKI KLQLVTQIVFFAFVAGFGISPTGFGLNHRNAGFLSLIWTVVTIVQAVRGFKGQD >gi|302034487|gb|GL383264.1| GENE 567 561625 - 563085 994 486 aa, chain - ## HITS:1 COG:Cgl1368 KEGG:ns NR:ns ## COG: Cgl1368 COG0165 # Protein_GI_number: 19552618 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate lyase # Organism: Corynebacterium glutamicum # 20 486 10 476 477 540 62.0 1e-153 MTTEPYDHSQNNAQADRPMALWGGRFSGGPSEALAALSVSTQFDWRLARHDIAGSSAHAG VLHAAGLLDDDQYEGMMKALNALEEDVVSGRFVAQPEDEDVHTALERGLMERAGKDLGGR LRAGRSRNDQIIALLRRYLREEARSLAGELLGLAHVLSRQAEDVGDAVIAGRTHMQHAQP VLLAHQLLAHAWPLLRDVQRFRDLDARLDCSPYGSGALAGSSLGLDPEAVARDLGFSSSV PNSIDGTAARDVVAEFAFVAAQVGVDLSRLSEEIIIWNTREFGYVTLDDSFSTGSSIMPQ KKNPDIAELARGKAGRLIGDLAGLMASLKGLPLAYARDLQEDKEPVFDQIDQLHLLLPAI TGMVDTAVFNTDRMAEMAGQGFSLATDVAEWLVRQGVPFRVAHELSGACVREAESQNKEL ADLTDQELTAIDPRLTPQVREVMTVQGSVRSRAGRGGTAPERVAEQITELREAIAGLRSF GEAETR >gi|302034487|gb|GL383264.1| GENE 568 563173 - 564369 637 398 aa, chain - ## HITS:1 COG:ML1409 KEGG:ns NR:ns ## COG: ML1409 COG4992 # Protein_GI_number: 15827739 # Func_class: E Amino acid transport and metabolism # Function: Ornithine/acetylornithine aminotransferase # Organism: Mycobacterium leprae # 1 395 1 395 404 329 47.0 6e-90 MAEQQTNGNWQERYRNALLGVFGNPQLCLDHGQGCVVVDNDGKEYLDLLAGIAVNALGYA HPAWVEAVSHQSETLAHVSNFFTTGPQLDLAEKLLALAKAPKGSAVFLSNSGTEANEAAI KICLARKNGRIIALNHAFHGRSLGALSLTHKIAYRQPFGPSAVDVTFIAPEDPDALASEL DRGDVSGVFMEPIQGEAGVVPLSDEYLQQVRELTACHDVLMVVDEVQCGMGRTGRWFAHQ SAHITPDVMTMAKALGGGFPIGATMAFGSDVSGILAAGQHGTTFGGNPLACAAALAVIST IESDDLLTHVRQIGTLMSTALRQSHPRITEVRGTGALLGVQFDSDIAADLVAAARDAGFI VNAVNPSTLRLAPPYILTKAEAESFIAALPRLIDAVQA >gi|302034487|gb|GL383264.1| GENE 569 564380 - 565312 834 310 aa, chain - ## HITS:1 COG:Cgl1363 KEGG:ns NR:ns ## COG: Cgl1363 COG0548 # Protein_GI_number: 19552613 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate kinase # Organism: Corynebacterium glutamicum # 14 307 8 295 317 277 50.0 2e-74 MTLALDIPLNDTQFSAQRKSEVLVEALPWIRRFQGRTVVVKYGGNAMVDPGLQQAFADDI VFMASVGIRPIVVHGGGPQINAMLAESATPVEFRNGLRVTSPEVMEVVRMVLVGQVGRQL VNRINAYAPLAAGMSGEDSGLLSARKSRVIVDGEQIDMGLVGDIVDVNIDLVISMLDRGQ IPVIAPVSPEVDAAGRPTGQVLNVNADTAATAIAQALRAEKLVMLTNVAGIYGTWPDPHT LISEVSASDLRAMIPRLGEGMRPKAQALLDAIDGGVSSAAIVDGRIEHALLLEIFTTRGV GTMARSDDYV >gi|302034487|gb|GL383264.1| GENE 570 565309 - 566475 865 388 aa, chain - ## HITS:1 COG:ML1407 KEGG:ns NR:ns ## COG: ML1407 COG1364 # Protein_GI_number: 15827737 # Func_class: E Amino acid transport and metabolism # Function: N-acetylglutamate synthase (N-acetylornithine aminotransferase) # Organism: Mycobacterium leprae # 3 388 19 407 407 287 47.0 2e-77 MSVTYPLGFRAGGIQAGLRTTPGLDLALIVNDGPADVVAGVFTTNRVCAAPVQWSRHATA DHKARAVIVNAAVANACTGINGFADCQCEAEHVATLLECKPHEVVIASTGVIGVRLDMPS ILVGASTIHRALGRGDNADASAARAIMTTDTVPKMATVDAGGARFGGIAKGAGMLAPQLA TMLVFLTTDAIVDPEEFQDSLAKACDITFSRVDSDACMSTNDTVVAMASGASGISLTGDE LTDALTELCAILARQLVADAEGSHHDVKVTVTGAISTEAAVAVAREVTRSNLVKTAIAGN DPNWGRILAAIGCVPENVAPFDPDQVDVSINDIQICKAGGIGEDRNLVDMRPREVHIDIE LHAGDAEAAVWTNDLTHQYVEENSAYTS >gi|302034487|gb|GL383264.1| GENE 571 566487 - 567536 601 349 aa, chain - ## HITS:1 COG:Cgl1361 KEGG:ns NR:ns ## COG: Cgl1361 COG0002 # Protein_GI_number: 19552611 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate semialdehyde dehydrogenase # Organism: Corynebacterium glutamicum # 8 349 15 357 357 244 42.0 3e-64 MSAKGFTVAVAGASGYAGAEVVRLLSGHPALTMGDLAAHSQAGLPLAHVMPHLVGVAKER TLSEIDVERLASHDAVVLALPHGASGQIVQELVKMNPDLVIVDAGADFRLLSASDWQRWY GSDHAGTWTYGLPELPRAEGGSQRDMLSGATRIAAPGCNASAVALGLAPLVGLVDISQST ATLIVGTSGAGKSSRPDLTFSRMSGGAHPYSVGNAHRHIPEILQSLRMAGAEKPHLSVSA VLVPMTRGILAVCTAPSQASSDDLLARLREVYGDEPLIHVTNAYPDTHDVVGSAMTHINA VGDPDNGLATIVVALDNLVKGTAGAVIQCLNVAFGLPETTGLPLIGLNP >gi|302034487|gb|GL383264.1| GENE 572 567641 - 568123 606 160 aa, chain - ## HITS:1 COG:Cgl0781 KEGG:ns NR:ns ## COG: Cgl0781 COG0691 # Protein_GI_number: 19552031 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: tmRNA-binding protein # Organism: Corynebacterium glutamicum # 9 156 14 160 164 145 51.0 4e-35 MPREQGVRVVARNRRATHDYTIGDTWEAGLVLQGTEVKSLRAGKATLTDAFAQVDERGEV WMYNLHIPEYAFGTWRNHDVMRKRKLLLNKREIAKLSREADGPGKTIVPLQLYFKDGYAK VEIAVGTGKRDWDKRQAIRERDAKREAQRVLANRVRNRKR >gi|302034487|gb|GL383264.1| GENE 573 568169 - 569071 775 300 aa, chain - ## HITS:1 COG:MT3185 KEGG:ns NR:ns ## COG: MT3185 COG2177 # Protein_GI_number: 15842672 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division protein # Organism: Mycobacterium tuberculosis CDC1551 # 5 299 7 296 297 137 28.0 2e-32 MRHTLRETWSGLRRNAAMTLAVVVTMWVSLSLFGAALLATQQVGLLKGKWYDKVEVSVFL CVDGVPGAQCSGEKAATQAQKDAIREALESNPQVSRVYYESKHEAFEEYQRIYADSPVRD VLTEDTIQDSYRVKLVDPQQYQGVVTEAQSLPGVQSVVDLHNVLDPIFLWMNALRWVTFG MSVLLLVAAALQIGNTIRMAAFSRRRELGIMKLVGASNTYILMPFLLESLIAGLLGALLA CVTLALGADVVVMRKMAHSITTLAWVGWPQVWKSIAWMVVVAVVLSVAPAYVATKKYLRV >gi|302034487|gb|GL383264.1| GENE 574 569105 - 569830 314 241 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 13 223 3 215 223 125 35 3e-27 MASQERNRLTGTDVITFDSVTKTYTGQSQAALSDVNVDIDKGEFVFLVGQSGSGKSTFIR LILREYRPTRGTLYVAGKNLNQLRSWKVPALRRQIGTVFQDFRLLPRKTVYENVAFAMQV IGKPTKEIRSVVPETLELVGLDGKQKRMPDELSGGEQQRVALARAFVNRPKILIADEPTG NLDPDTAVGIMKVLDRINRTGTTVVMATHDSTIVDQMRRRVIELEFGHVVRDENEGVYRN S >gi|302034487|gb|GL383264.1| GENE 575 569803 - 570906 942 367 aa, chain - ## HITS:1 COG:Rv3105c KEGG:ns NR:ns ## COG: Rv3105c COG1186 # Protein_GI_number: 15610242 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor B # Organism: Mycobacterium tuberculosis H37Rv # 5 367 11 378 378 440 66.0 1e-123 MALVDLQQTVEDLDASLSSIENVLDPEAKKAEIADLERQVAVPNLWGDQENAQRVTSRLS ALQAEIERLERLRARIEDVHVLLEFAAADDKESLAEATTETVKLREEIDALEVRTLLSGQ YDEREAVVTIRSEAGGVDAADFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFV VHAPFAYGTLSVEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVD VFHASGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKLLEKAREE QEAEMNSLKSEGNSWGAQMRSYVLHPYQMVKDLRTNHEVGNTDAVFDGDIDDFIDAGIRW RRKNETD >gi|302034487|gb|GL383264.1| GENE 576 571220 - 571930 548 236 aa, chain + ## HITS:1 COG:SA2133 KEGG:ns NR:ns ## COG: SA2133 COG3152 # Protein_GI_number: 15927922 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Staphylococcus aureus N315 # 53 231 5 180 206 68 30.0 1e-11 MTEPNNPHRPDEAGVSGWPSEAGRDPYGQPSNPYQMPAPYSSGLPVAENHRRPYVDFGLA IKLFFKNYAVFRGRASRSEYWWTVLFNFIIAVAIQALMPILQGVGLMSAITSNSTTEFSA MSTSGVIFTMLPLAWLLAIIIPCLALTVRRLHDVNHSGWWVMAPTLCGIASAIMMILALV SAAANDGKPSMALLTIGIVLFVAIFVVNIILLIFVISDSHPEAWKKYDKEPLPVTE >gi|302034487|gb|GL383264.1| GENE 577 571992 - 574358 1639 788 aa, chain - ## HITS:1 COG:ML0977 KEGG:ns NR:ns ## COG: ML0977 COG1674 # Protein_GI_number: 15827463 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Mycobacterium leprae # 3 782 121 872 886 664 51.0 0 MIRGIGGRPSEPDITHDGTGLVLLLLSALVAAGFWFDLPGGFGNGLRMGVSTIFGALSYA LPLFGLAAMWHTLRHPVTLGTGGRQVLGWACFFLGLLGVINIAHGLPRPDHPEVVRAAGG MLGYISSSLFADLLTKWVALPLLLVMTALGVLLVVGRPLIDGVTHIRSASHRAVVKPREI ESRRAYDTPLVGDTLVDHRDDDVDTQQMDPVKERPRKRKSSSERTNESLDAIFDAEIVDE TPSASAEESLPRDVPTDDELNKARTTAGLPQGFTVHEHTDLEPPAHEPMPARVEQLQLSG DIAYTLPASELLRPGSVPQARTDASDAVVSKLSTVFDEFGIDAQVTGYSRGPTVTRYEVE LGAAVKVEKVTALSKNIAYAVASPDVRILSPIPGKSAIGIEIPNRDKEVVSLGDVLRSSK ARNDHNPLVVGLGKDVEGGFVIANVAKMPHLLVAGATGSGKSSFVNSLITSVMMRATPDE VRMMLVDPKRVELTQYEGIPHLVTPIITSAKKAAEALQWVVREMDQRYDDLAAFGFRHVK DFNKAVQAGEVTLPPGSERVLAPYPYLLVVVDELSDLMLVAPRDVEDSIVRITQLARAAG IHLVLATQRPSTDVCTGLIKANIPSRLAFATSSMTDSRVILDQPGAEKLVGQGDGLFLPM GASKPVRVQGAWVSDSEIHQVVSHVKSQMEAHYRDDVAAPTAAMKVAEDIGDDMELVLEA AKLVVELQLGSTSMLQRKLRVGFAKAGRLMDILETRNVVGPSEGSKARDVLVKPDDLDDV LANLQAEG >gi|302034487|gb|GL383264.1| GENE 578 574378 - 574668 161 96 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313764087|gb|EFS35451.1| ## NR: gi|313764087|gb|EFS35451.1| hypothetical protein HMPREF9567_00927 [Propionibacterium acnes HL013PA1] hypothetical protein HMPREF9575_01750 [Propionibacterium acnes HL110PA1] hypothetical protein HMPREF9576_02069 [Propionibacterium acnes HL110PA2] hypothetical protein HMPREF9580_01714 [Propionibacterium acnes HL087PA2] hypothetical protein HMPREF9585_02518 [Propionibacterium acnes HL083PA1] hypothetical protein HMPREF9587_01393 [Propionibacterium acnes HL025PA1] hypothetical protein HMPREF9589_00770 [Propionibacterium acnes HL059PA1] hypothetical protein HMPREF9593_00432 [Propionibacterium acnes HL046PA2] hypothetical protein HMPREF9604_02317 [Propionibacterium acnes HL036PA1] hypothetical protein HMPREF9605_01603 [Propionibacterium acnes HL036PA2] hypothetical protein HMPREF9611_02298 [Propionibacterium acnes HL063PA1] hypothetical protein HMPREF9612_02596 [Propionibacterium acnes HL063PA2] hypothetical protein HMPREF9616_02576 [Propionibacterium acnes HL007PA1] hypothetical protein HMPREF9617_02033 [Propionibacterium acnes HL056PA1] hypothetical protein HMPREF9591_02204 [Propionibacterium acnes HL086PA1] hypothetical protein HMPREF9597_01995 [Propionibacterium acnes HL005PA4] hypothetical protein HMPREF9598_01636 [Propionibacterium acnes HL050PA1] hypothetical protein HMPREF9600_02281 [Propionibacterium acnes HL050PA3] hypothetical protein HMPREF9606_02297 [Propionibacterium acnes HL036PA3] hypothetical protein HMPREF9608_02559 [Propionibacterium acnes HL067PA1] hypothetical protein HMPREF9609_00622 [Propionibacterium acnes HL027PA1] hypothetical protein HMPREF9613_02495 [Propionibacterium acnes HL002PA1] hypothetical protein HMPREF9614_01706 [Propionibacterium acnes HL002PA2] hypothetical protein HMPREF9618_01753 [Propionibacterium acnes HL082PA1] hypothetical protein HMPREF9620_02543 [Propionibacterium acnes HL037PA1] hypothetical protein HMPREF9564_02558 [Propionibacterium acnes HL053PA1] hypothetical protein HMPREF9566_02402 [Propionibacterium acnes HL045PA1] hypothetical protein HMPREF9573_02610 [Propionibacterium acnes HL072PA2] hypothetical protein HMPREF9594_01827 [Propionibacterium acnes HL005PA1] hypothetical protein HMPREF9595_02295 [Propionibacterium acnes HL005PA2] hypothetical protein HMPREF9596_00828 [Propionibacterium acnes HL005PA3] hypothetical protein HMPREF9565_01538 [Propionibacterium acnes HL053PA2] hypothetical protein HMPREF9569_01590 [Propionibacterium acnes HL078PA1] hypothetical protein HMPREF9610_00218 [Propionibacterium acnes HL027PA2] hypothetical protein HMPREF9615_01575 [Propionibacterium acnes HL002PA3] hypothetical protein HMPREF9572_01512 [Propionibacterium acnes HL072PA1] hypothetical protein HMPREF9583_01391 [Propionibacterium acnes HL038PA1] hypothetical protein HMPREF9590_01115 [Propionibacterium acnes HL059PA2] hypothetical protein HMPREF9592_01702 [Propionibacterium acnes HL046PA1] hypothetical protein HMPREF9601_01835 [Propionibacterium acnes HL030PA1] hypothetical protein HMPREF9602_02488 [Propionibacterium acnes HL030PA2] putative amidase [Propionibacterium acnes HL096PA3] putative amidase [Propionibacterium acnes HL097PA1] putative amidase [Propionibacterium acnes HL096PA2] hypothetical protein HMPREF9570_02642 [Propionibacterium acnes HL043PA1] hypothetical protein HMPREF9571_02506 [Propionibacterium acnes HL043PA2] hypothetical protein HMPREF9568_01889 [Propionibacterium acnes HL013PA2] hypothetical protein HMPREF9581_01418 [Propionibacterium acnes HL087PA3] hypothetical protein HMPREF9586_02217 [Propionibacterium acnes HL083PA2] hypothetical protein HMPREF9584_01933 [Propionibacterium acnes HL092PA1] hypothetical protein HMPREF9588_02408 [Propionibacterium acnes HL025PA2] hypothetical protein HMPREF9579_01491 [Propionibacterium acnes HL087PA1] hypothetical protein HMPREF9563_01439 [Propionibacterium acnes HL020PA1] putative amidase [Propionibacterium acnes HL099PA1] # 1 96 1 96 96 167 100.0 2e-40 MPDHVADSTWATGLGEVDALEGVDLLRELADVFLLLPFERAPEPRDDFFAAVFRGRAGED ARVAMSLTLSTMATTRPEVKRGVTGLVVVARNSTAL >gi|302034487|gb|GL383264.1| GENE 579 574683 - 575645 602 320 aa, chain - ## HITS:1 COG:ML1676 KEGG:ns NR:ns ## COG: ML1676 COG0611 # Protein_GI_number: 15827887 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate kinase # Organism: Mycobacterium leprae # 1 318 9 323 325 214 47.0 1e-55 MATTTTISQVGEFPLISSMVGDLTMGQAVTLGPGDDGAVFQVDGSAVVSTDVLVEEVHFR RRWSTATDVGRKAVAVNVSDIEAMGAVPVALVVGFSAPGDLPTSWAREFMAGMTAESQKA GVSVVGGDTTGGPVVSIAVTVIGQTAGMAPVRRDGAVPGDEVAVIGQLGLAAAGLALLGR GFRSPRAVVAAQRCPEVPYGQGRVAAKAGVHAMIDVSDGLLADLGHIAEASGFAMDIDTA KLDITESVRTVGMATGVDPLTWVLAGGEDHALAATFAPGTVPDGWTVVGRVLPPDEAPDP TVLVDGQVWQQERGWTHFHS >gi|302034487|gb|GL383264.1| GENE 580 575823 - 576143 206 106 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4404 NR:ns ## KEGG: HMPREF0675_4404 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 106 46 151 151 204 100.0 9e-52 MADLPQTVAGATLNDHDTTVATWGDPHIVLRCGVDKPAGLQPTSPCDVVNDVGWFSEQID DGWRFTTIGRAGNIEVTVPTSYAPQADALVDLSAAIKKMPQVRACQ >gi|302034487|gb|GL383264.1| GENE 581 576156 - 577253 819 365 aa, chain - ## HITS:1 COG:ML1678 KEGG:ns NR:ns ## COG: ML1678 COG1181 # Protein_GI_number: 15827889 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanine-D-alanine ligase and related ATP-grasp enzymes # Organism: Mycobacterium leprae # 3 365 17 384 384 281 44.0 1e-75 MNRIHVAVIFGGMSSEHSISCLSAANVVAAIDAERFDVSGVGISPEGIWVRYGADEILAL PGTGQLPTVEVGDRPLVSVKQMPEGTCIVDTEGNVDAVQVVFPVLHGPFGEDGTIQGLLE MAGVRYVGCGVAASANCMDKHLTKMILSEAGVLVGPYVVVRDHEWREDRNAVLKAASRLE YPVFVKPARGGSSIGISRVTSPEHLETAIEMAREHDSKVLIEQGIRGREIECSVIDGRHG AAPRASVPGEIVVHDPDGFYDFEAKYLSGEQKASVQAHANLDDATRRRVQKVAIKAFQVL GCEGLARIDTFVTLDGAVYVNEPNTMPGFTRSSGFPLMWQASGMTYAQIVSELIELALER PLGLR >gi|302034487|gb|GL383264.1| GENE 582 577302 - 578078 414 258 aa, chain - ## HITS:1 COG:MT2237 KEGG:ns NR:ns ## COG: MT2237 COG0204 # Protein_GI_number: 15841672 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Mycobacterium tuberculosis CDC1551 # 26 169 13 157 247 82 40.0 8e-16 MALPAVTNPADAPGLIFRMGVGTLYPLARILTRFDHHGGENLPGPGPALIVSNHISNYDP VVLGAFLVANGRWPHWLAKKELFSVPIVGWVASASGQIPVDRKGPNPAKVLHDAKAALDK GMTVVMYPEGTITADPLHWPMTGRTGAARLALETGVPVIPVGQWGPQEVMGYKEMTFPKL WPRKTMKLYCGTDVELSDLRGRHDLASVREATNRIMDAIDAQVARVRGEFPPPDRYDMRK GARIPKSIASARPVVDPH >gi|302034487|gb|GL383264.1| GENE 583 578178 - 578570 283 130 aa, chain - ## HITS:1 COG:ML1684 KEGG:ns NR:ns ## COG: ML1684 COG0066 # Protein_GI_number: 15827895 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase small subunit # Organism: Mycobacterium leprae # 27 129 93 194 198 87 45.0 7e-18 MPAVEDFEDEVARSAAFGVHGFDPDEIGSRFADIFRNNSANNGLLLAQVDPKVVGELWDF AEQHPGEQLTLSLENRTINLPGRTTYPFHIDDVTRQRLLAGLDAVGETLEHADDIAAYEA HRPSFMPTTS >gi|302034487|gb|GL383264.1| GENE 584 578579 - 578986 351 135 aa, chain - ## HITS:1 COG:ML1685 KEGG:ns NR:ns ## COG: ML1685 COG0065 # Protein_GI_number: 15827896 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase large subunit # Organism: Mycobacterium leprae # 1 134 185 318 485 191 67.0 4e-49 MAVMVDGEVPEEVTPKDLILALISEIGTGGGQGHMVEYRGEAIEKMSMEGRMTICNMSIE WGARVGMVASDETTFTYLKDRPHAPRGAQWDKAVAYWRTLRTDDDATFDAEIHVDASNLA PLRYLGYQPGAGSPP >gi|302034487|gb|GL383264.1| GENE 585 579014 - 579349 265 111 aa, chain - ## HITS:1 COG:ML1685 KEGG:ns NR:ns ## COG: ML1685 COG0065 # Protein_GI_number: 15827896 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase large subunit # Organism: Mycobacterium leprae # 4 111 65 174 485 158 72.0 2e-39 MSLLVGRSARRSVLTIATEDHNIPTVGSIEPIVDPVSRAQVEALRANAPEFGVPPLGDAD QGVVHIIGPQLGLTQPGMTVVCGDSHTSTHGAFGALAFGIGTSEVEHVLAT >gi|302034487|gb|GL383264.1| GENE 586 579573 - 580292 474 239 aa, chain + ## HITS:1 COG:Rv2989 KEGG:ns NR:ns ## COG: Rv2989 COG1414 # Protein_GI_number: 15610126 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mycobacterium tuberculosis H37Rv # 1 216 1 215 233 177 55.0 2e-44 MDESSGVGVLDKAALVLAALETGPASLVGLVQMTGLARPTAHRLARALEHHRFVGRDLQG RFILGPRLSELAAAAGEDRLLAASGPILARLRDITGESAQLYRRQAGSRVCAAAAERPTG LRDTIPVGSVLSMDAGSAAQILLAWEDVDKIRRGLSHSAFSEVTLAAVRKRGWAQSVGER EAGVASVSAPVRSPSGKVIAAISVSGPIERLTRQPGRIHAPAVVAAGERLSEVLRRSAQ >gi|302034487|gb|GL383264.1| GENE 587 580593 - 580841 82 82 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVDRKSHESGPTDTRVTRSFALICKVGGWAIRVSRRCATEVHHGGMTLGYGVIGSPTDSG SVSPGSSPGTPARETKSMKLHR >gi|302034487|gb|GL383264.1| GENE 588 580793 - 581737 776 314 aa, chain - ## HITS:1 COG:no KEGG:PPA1365 NR:ns ## KEGG: PPA1365 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 314 1 314 314 491 99.0 1e-137 MAARVLSRHVTVTDPEPRVDYTRVLVDSSAGPGPGLLGLIGLLLGYAVVVPGLLYAFLGV GWLLERTDGERFSAYYTRAAGYHTVGGLIATHVALASLIVVVLVLARYLNHRVPRWVASV QPGIRWRFGLLVGLVAVVVLNLTQLLVRGGVNAHYIVPRHWWAWLLAIIITSPFQAIAEE MFFRGYLMNVISGLSVNLPEKAGRWTSVVVSALVFAFMHGTQNAWLFADRFAFGLLAGWL VIVTGGIEAGVAAHVVNNLFAFGYAVFLGGVSQARGMTAMSWVDAAWDVGGFLTIALAGW WIGSLMRVARRTPA >gi|302034487|gb|GL383264.1| GENE 589 581737 - 582537 642 266 aa, chain - ## HITS:1 COG:MT3071 KEGG:ns NR:ns ## COG: MT3071 COG0179 # Protein_GI_number: 15842549 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) # Organism: Mycobacterium tuberculosis CDC1551 # 34 264 6 234 239 244 54.0 2e-64 MRIARFVTAGSDPAFGIVELAADHGDHPETIAVITGDPVAAPVQYTGARHDLADVRLLSP VIPRSKIIGVGRNYADHASELGNEVPHQPLLFVKPNTSVIGPDEPIVRPTASSNLHYEGE LAIVIGRICKDVPEDRAQEVIFGFTVANDVTARDLQDSDGHWVRAKGADTFCPLGPWMVT HFSIAEASHRQIVTRLDGREVQHGNTDQMVHTIPKLISYISSFMTLLPGDVILTGTPAGV GPMELGQRVEVEIEGIGTLTNTVVEV >gi|302034487|gb|GL383264.1| GENE 590 582618 - 583907 1122 429 aa, chain + ## HITS:1 COG:MT3415 KEGG:ns NR:ns ## COG: MT3415 COG0213 # Protein_GI_number: 15842906 # Func_class: F Nucleotide transport and metabolism # Function: Thymidine phosphorylase # Organism: Mycobacterium tuberculosis CDC1551 # 10 426 11 427 427 418 57.0 1e-117 MTSTYSVVDLIRAKREGQTLNSDQIAWLIRAYTDDIVADEQMSAMAMAVYFQGLDDAELS AWTTAMIKSGERMSFAGLSRPTVDKHSTGGVGDKITLPLAPLVAACGAAVPQLSGRGLGH TGGTLDKMEAIPGWRADLSHDEMVAQLEKVGAVICAAGPGLAPADKKLYALRDVTGTVES IPLIASSIMSKKIAEGTDSLVLDVKTGSGAFMKTDKDARELASRLVELGEAAGVRTTALL THMDVPLGYACGNGIEVAESLEVLAGGGPADVVELTVALARHMVKVAGLDGIDPADVLAS GQAMDVWRNMVRAQGGDPDAPLPMAHHTQDIVATEAGVITGIDAMSVGLAAWRLGAGRAR KEDPVQAAAGIMLRVRPGDRVVTGQPLATLLTDTPDSIARAEDAMTNAFTVGQTFQPQDI VIDTVVAQS >gi|302034487|gb|GL383264.1| GENE 591 583947 - 585038 754 363 aa, chain - ## HITS:1 COG:XF1999 KEGG:ns NR:ns ## COG: XF1999 COG0115 # Protein_GI_number: 15838593 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase # Organism: Xylella fastidiosa 9a5c # 1 359 1 357 362 350 50.0 2e-96 MSLRFASADDLTWSSDERIALEHANPRFGAVLADHMAVATWQAGEGWGDDAVVNYHGLDI NPGSAVLHYAQEIFEGLKAYRHADGSIWLFRPDQNGERFVRSAKRLALPTLRVEDFVTAC MRLVEVDSRWVPEPGEGGEKSLYLRPFMIAYQDFLGLAAASTVLFSVIGSPVGAYFVSGV KPLRLLVERRQARTAPGGTGEAKCGGNYAASLRSQIDAKTRGCNEVLFVDAVEHRWIEEL GGMNFMAISKDGQLVTPELAGTILRGVTRRSILEVAPDLGLEPVERKIDVDELLDGVRSG EFPEVFACGTAAVVTPIGSFLDGDTDVKVSEPTGKTTMEIRRRLLDIQFGRAEDTRGWLK RVC >gi|302034487|gb|GL383264.1| GENE 592 585126 - 585506 151 126 aa, chain + ## HITS:1 COG:Cgl1256 KEGG:ns NR:ns ## COG: Cgl1256 COG0473 # Protein_GI_number: 19552506 # Func_class: C Energy production and conversion; E Amino acid transport and metabolism # Function: Isocitrate/isopropylmalate dehydrogenase # Organism: Corynebacterium glutamicum # 9 77 4 70 340 58 49.0 3e-09 MTNDVTQPAVIGGDGIGPEVTEQALHVLEQTVGSDAFATHEYHLGAAHWKATGEVLDNST LAEIAQEVAIVLDAVGATPDSTEVPSVLFGARPFRPDPQAQRARQCRNLVASDRRRSCSR VPECHH >gi|302034487|gb|GL383264.1| GENE 593 585440 - 585919 328 159 aa, chain + ## HITS:1 COG:Cgl1256 KEGG:ns NR:ns ## COG: Cgl1256 COG0473 # Protein_GI_number: 19552506 # Func_class: C Energy production and conversion; E Amino acid transport and metabolism # Function: Isocitrate/isopropylmalate dehydrogenase # Organism: Corynebacterium glutamicum # 29 159 208 338 340 146 59.0 1e-35 MPEPCGVGSSTKLFKSSRVSPLTTCTSTYLHVDAVTIALVRDPQRFDVIVTDNLIGDIIT DLASAVTGGVGLAPSANINTSGEFPSMFEPVHGSAPDIAGTGKADPTAAILSIALLLDHL DRPEDAARVREAVSANNATRASGPARTTSEIGRDIAQRI >gi|302034487|gb|GL383264.1| GENE 594 586046 - 586564 311 172 aa, chain + ## HITS:1 COG:DR0603_3 KEGG:ns NR:ns ## COG: DR0603_3 COG4122 # Protein_GI_number: 15805630 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Deinococcus radiodurans # 2 172 19 190 193 75 32.0 5e-14 MGYFTTTRNETGRFMATLAAGVHGAIGECETGSGAGAAWLRLGARKRTRVVSYEPDPTVC ARAREVLADLDIEVIEGTWDDLLDHGPFGLLSVPIRVARAHDVDEILKAVSVGGLVVIDD MPPSHGFPPHDINGTVDTTRLAWLTHPKVHATEIQLASDMAAIVACRLSARG >gi|302034487|gb|GL383264.1| GENE 595 586631 - 587659 1123 342 aa, chain - ## HITS:1 COG:TM0550 KEGG:ns NR:ns ## COG: TM0550 COG0059 # Protein_GI_number: 15643316 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Ketol-acid reductoisomerase # Organism: Thermotoga maritima # 1 334 1 334 336 396 59.0 1e-110 MAKIYYDDDADLSIIQNRQVAVIGYGSQGHAHALNLRDSGVDVRVGLRDGSSSIAKAEAQ GLRVLSIEDACEEADLIMVLVPDQNQRQLYAEHIAPHLKDGDALFFAHGFNVHFGYIKAP QGVDVCMVAPKGPGHIVRREYSDGRGVPVLVCVEQDASGIAWDLTRSYAKALGGLRAGGI ETSFREETETDLFGEQAVLCGGLSHLIQAGFETLVTAGYQPEMAYFEVCHEMKMIVDLII EGGISKLRWSISDTAEYGDYVSGPRVIDDHVKKNMKAVLDDIQNGAFAKRFIADQDAGAP QSKKFREGEAKHPIEATGKELRKMYSWLAAADDDYTEGSVAR >gi|302034487|gb|GL383264.1| GENE 596 587836 - 588081 297 81 aa, chain - ## HITS:1 COG:ML1695 KEGG:ns NR:ns ## COG: ML1695 COG0440 # Protein_GI_number: 15827902 # Func_class: E Amino acid transport and metabolism # Function: Acetolactate synthase, small (regulatory) subunit # Organism: Mycobacterium leprae # 1 81 50 130 169 61 51.0 4e-10 MTIGVDAVSAQALEQIIKQLNKLIEIHKIAEPEPSTVTRELILVKVRSNVENRSKIIDTV ALRRAKAVDASLESLTIEATG >gi|302034487|gb|GL383264.1| GENE 597 588132 - 588359 141 75 aa, chain - ## HITS:1 COG:ML1696 KEGG:ns NR:ns ## COG: ML1696 COG0028 # Protein_GI_number: 15827903 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Mycobacterium leprae # 2 54 567 619 625 60 56.0 5e-10 MVDETITAANTINDRPVVVEFIIRTDAMVWPMVAFGASNDEITIARDMAPDWGDVGDDVA PGDEDSNDDEAGKMS >gi|302034487|gb|GL383264.1| GENE 598 588767 - 589177 343 136 aa, chain - ## HITS:1 COG:L60959 KEGG:ns NR:ns ## COG: L60959 COG0537 # Protein_GI_number: 15673980 # Func_class: F Nucleotide transport and metabolism; G Carbohydrate transport and metabolism; R General function prediction only # Function: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases # Organism: Lactococcus lactis # 2 109 3 111 133 105 44.0 2e-23 MDCLFCSIAAGDIPATIIDSDDASVAFLDIEPFQDGHTLVIPRRHVTSVLDDDGELGRIS PMVTKVARRLVDSLGASGVNVVSNAGEVAGQSVHHLHVHVIPRYDREPGINAIRSAMPRR PIEEVAAMVTGESNRK >gi|302034487|gb|GL383264.1| GENE 599 589222 - 589983 513 253 aa, chain - ## HITS:1 COG:Cgl2041 KEGG:ns NR:ns ## COG: Cgl2041 COG0107 # Protein_GI_number: 19553291 # Func_class: E Amino acid transport and metabolism # Function: Imidazoleglycerol-phosphate synthase # Organism: Corynebacterium glutamicum # 1 253 1 257 258 289 64.0 4e-78 MAVAIRVIPCLDVKDGRVVKGVNFVGLRDAGDPVELAAEYGRLGADEVTFLDISASTEGR ATTREMVTRCAETVFVPLTVGGGVRGVDDVDVLLRAGADKVGVNTAAIAHPGMIDEVADR FGNQVIVLSVDARREPDRPSGFGVTTHGGTRSAGLDAVEWACQAVERGAGEILLNSMDAD GTADGFDIEMIEAVRAAVDVPLIASGGAGKVADFVEAARAGVDAVLAASVFHYHTLTIAQ IKDGLRHAGFEVR >gi|302034487|gb|GL383264.1| GENE 600 590033 - 592786 1593 917 aa, chain - ## HITS:1 COG:ML1333 KEGG:ns NR:ns ## COG: ML1333 COG4581 # Protein_GI_number: 15827694 # Func_class: L Replication, recombination and repair # Function: Superfamily II RNA helicase # Organism: Mycobacterium leprae # 5 913 7 918 920 659 45.0 0 MSETLDRFIAGLSFEPDDYQVKACQDLDDGAGVLVAAPTGAGKTVVGEYATDLALASGLK CFYTTPIKALSNQKFHDLVTRHGEDQVGLLTGDVTINSEAPVIVMTTEVLRNMIYRNSHT LDTLGWVVLDEVHYLADRFRGPVWEEVILGLDPRVKIVGLSATVSNAEEFGEWLDEVRGD VRVVVSERRPVPLVQHVAVARRLYELFDSRRPTEVNPELTSIAKEEARFQRDDSRRPRGR SGKGKRSVSYGTGRFGGASAQRRGRGGRPRGPRNQTSRIQVVRSLHKVNLLPAIIFVFSR SGCDAAVSQLLNTDLVLTSQQEARQLRRIAQRRGEGLTDEERRAVGWNHFMAAFERGIAA HHAGLLPVIKAIVEEGFVAGLLKVVVATETLALGINMPARTVVLEKLVKYNGQTHADITP GEYTQLTGRAGRRGIDTQGHAVVCWQPGMDPRAVAGLASRRTYPLNSTFVPTYNMAVNLV GSMGREKARDLLEHSFAQFQIDRRLGGSAVRNRQTQADIEAYLKAAHCERGDFTVYARLR ENIRELEHEQARLRKVELPSQVADSLSSLDPGDIIAVPSGRHAGWVVVVDPGTHGTRGQR PRPLVMTPDRTVIRLGHQDIDAPVTRVAGVKVPRHFHPENQADRRCLGKAFDRVLEGLGR PVVKPRRAAVDAELSDQITELRSQMKAHPCHSCPDRESHARFAERAMRLRRRSERELTKA RAKATSIATQFERIVLVLEALGYLGTGGDTVTDAGRMLSGIYSELDLVTAEAIRRGVFDG LDCPQLAAVLSTIVHESRPGDRGHLHRMPDGKSEAAESQLRAVRAEIGLLERDHRIERPR DLDIGFAEASYAWAAGAGLDTVLDDMSAGDFVRRVRQVCDLAGQIAHAGVGENLAHTCRQ VVGAMQRGVVTMDREED >gi|302034487|gb|GL383264.1| GENE 601 592968 - 593837 693 289 aa, chain - ## HITS:1 COG:Rv2093c KEGG:ns NR:ns ## COG: Rv2093c COG0805 # Protein_GI_number: 15609230 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Sec-independent protein secretion pathway component TatC # Organism: Mycobacterium tuberculosis H37Rv # 17 286 13 288 308 154 33.0 2e-37 MATDTRQSDEDHRRFARFRPPQAGEGGTMSLLDHIRELRYRIIVSFIAVVITSSVAFVFY RPLVEIVMHPYQQASLAIKAKNPRASLQVVNTGVVAPFVLNMRVTIVAGLIAACPIWLYQ VWAFIVPGLLVNEKKWALRFLGSAIPLFLLGSVLGYWVLPKGIALMLNFTPHGMGITNLL DMNAFLALEIRVILLFGVSFLLPVVLVLLNLIHVLSSAQLKAARKWSIFGFFCLGAFVNP SGDPISMCALAIPLSVMYVIAEWICRSNERKRSTDNMGIDKSEFDIQID >gi|302034487|gb|GL383264.1| GENE 602 593841 - 594074 365 77 aa, chain - ## HITS:1 COG:no KEGG:PPA1379 NR:ns ## KEGG: PPA1379 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: Protein export [PATH:pac03060]; Bacterial secretion system [PATH:pac03070] # 1 77 11 87 87 117 100.0 2e-25 MAPLLIANEATIIIIVLLALVLFGGSRIAGVGKGAGRAIREFKEETAGLNKGKDAKAEKD IEATEADVAKDETKPTE >gi|302034487|gb|GL383264.1| GENE 603 594169 - 594372 205 67 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4429 NR:ns ## KEGG: HMPREF0675_4429 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 67 1 67 67 103 100.0 2e-21 MWWIWVLVFAGVLLVVEIVVGTIWLWRKLAAILGEVERVTGRLDELAHILEDVDTTMNKD MTAPEAP >gi|302034487|gb|GL383264.1| GENE 604 594372 - 595340 832 322 aa, chain - ## HITS:1 COG:ML1330 KEGG:ns NR:ns ## COG: ML1330 COG2378 # Protein_GI_number: 15827691 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Mycobacterium leprae # 5 306 6 314 324 119 31.0 6e-27 MTARTDTARLLALIPYLRSHPGVAVTEVARVFGVSTDRVIADLKILWMVGLPGGMPDDLI DIDMDAVDSDGTITITNADALPRPMRLTPDEAWSLLAALQVIADLADDTVRPAVESAVEK LRQVCPQAGPDPVEASLEADYDPRSEWFTGACANKWRIEIVHRRGDDPTPHTQIVDPVRV EVRDGHRYLVGWSMARKQWRTWRLDRIVTGRRVGHATNHGRPPETLEWFSDVVDEVTLTL APRAGWVAEYHPVRHVEKDGDVWKVTFAVASATWLAELMVGLGPDVLSVDPPHAAAPALQ LARAAAAANSIEISNREAVEKS >gi|302034487|gb|GL383264.1| GENE 605 595337 - 596299 749 320 aa, chain - ## HITS:1 COG:ML1329 KEGG:ns NR:ns ## COG: ML1329 COG2378 # Protein_GI_number: 15827690 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Mycobacterium leprae # 1 221 1 232 331 129 42.0 5e-30 MAAQRSERLVNLVIALLVTDRPLTRAQLRDMIEDYRKVSEVAFQRSFERDKEELRRIGIT VESVTLDTFFGDEVGYRIPRADVELPPVQFTQAEADALATAARVWRESVLDESSTSALVK LRAAGVEPDTEAGIATQVVTGADAPSFSDLWRATIDRSRVRFGYRGGKHRTVDPWRMALR RGRWYLVGRDVDRDEPRLFRLSRISSAVTTVGEPGAVASPEPEVIEAHLNRLEPPEPEEV DVTMAVAPGVRLGVMTTHAEWDGPVPEGYEVVTGGFGGYDEAATAVLRAGGRIILLAPQE ARTILAERINAVLRLEENAS >gi|302034487|gb|GL383264.1| GENE 606 596387 - 597388 406 333 aa, chain + ## HITS:1 COG:Cgl0237 KEGG:ns NR:ns ## COG: Cgl0237 COG0008 # Protein_GI_number: 19551487 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Corynebacterium glutamicum # 15 288 2 278 293 223 48.0 4e-58 MTDFATTHSGLRHAAGRFAPSPTSALHLGNLRTALAAWLLARSTGRRFVVRIEDLDRARV AAAGKIASTQLRDLESLGLDWDGPVVRQSERLDLYADAVAGLETYPCFCTRREIAAATTA PNKADWRPYPGTCRRLTVQQRHERLTTRAPATRLASQLNTFEATDLARGCARGRVDDLVL VRNDGTPAYNLAVVVDDGLQGVDQVVRARDLWSSAPRQAQLAELLGFIPPVYAHTGLVTG PGGVRLSKSAGAAGLSDLVDSGIDHRQVVAWLCRSLGLPEVADPHELVNNVALTPPTPVA GIHRLDPRPLGGAMGWWSDAVLDVAVLRETRRP >gi|302034487|gb|GL383264.1| GENE 607 597431 - 598504 871 357 aa, chain - ## HITS:1 COG:Cgl0807 KEGG:ns NR:ns ## COG: Cgl0807 COG0545 # Protein_GI_number: 19552057 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerases 1 # Organism: Corynebacterium glutamicum # 239 353 4 118 118 63 32.0 7e-10 MAGIVLKHRSGNLKQVSSNKYRLVNAAALAAVLCVSSLVLASCNKSSSSPKPSASVSSVS APASASAKASSSPTKKPTMVTNLDQIKVSGEDGKAPKVEGAWPLAIAKTESKILKEGTGE KVDKNATLKVNYVGVNGRTGKEFDSSYKRGTTADFPLAQVVPGFAKGLVGKHQGDRVLIM MPGSDGYDSQGGAPQAGIMKGDSLIFVVDIVAIPLPKATGETVKPAAGLPTVKEVQGAPA VTIGKATKPNKLVVQPLIKGKGAAVTAHDSIDVKYRTYAWSSGELIEDGYSGEPVTGSMN SVIPGWKKGLTGQTVGSRVMLIVPPADAYPNGSTNPPVKKGETLIYVIDILSAQKES >gi|302034487|gb|GL383264.1| GENE 608 598515 - 599252 733 245 aa, chain - ## HITS:1 COG:Cgl1392 KEGG:ns NR:ns ## COG: Cgl1392 COG1187 # Protein_GI_number: 19552642 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Corynebacterium glutamicum # 2 245 75 320 320 225 51.0 7e-59 MSNEQGIRLQKVLAQAGLASRRAAEDMIAAGRVEVNGELIVEQGRRVDPERDEIRVDGSR IPTARRHVYYVLNKPQGVVSTMDDPEGRPCLSDLEGVPRGIRLFHVGRLDTETSGLILLT NDGEFANRMTHPSYKVLKTYLADVEGRVDDKVIRRLSKGLTLEDGPVKPDAVRLVQAGEE HSLVEVSLHEGRNRIVRRIMDSVAHPVRRLSRTAIGPVRLKRLGRGDMRELTHEELGQLL DLVEL >gi|302034487|gb|GL383264.1| GENE 609 599270 - 599635 249 121 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4435 NR:ns ## KEGG: HMPREF0675_4435 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 121 1 121 121 201 100.0 9e-51 MPRRVSLPGANELFRPTVGSHEPQSVEVPQQSKAHRARKTSQDATSRGKHAGSGRVRHDE KITVYVSTEELIALETARLTMRSQGINADRGRIVRASVAMALADFEENGEDSALAHLLTT D >gi|302034487|gb|GL383264.1| GENE 610 599620 - 600537 950 305 aa, chain - ## HITS:1 COG:Rv1708 KEGG:ns NR:ns ## COG: Rv1708 COG1192 # Protein_GI_number: 15608846 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Mycobacterium tuberculosis H37Rv # 3 301 18 315 318 331 58.0 1e-90 MSETAPEPLFRVPGPGREAEEAAENSIGPTGRPLPDLTEPTPALGGPKHATVISMCNQKG GVGKTTTTINLGAGLAEYGRRVLLVDFDPQGSLSVGLGINPHTLENSIYTLLMSPRDDVH DVIQPTETEGMDLLPANIDLSAAEVQLVSEVAREQTLKRVIDRIRGEYDMILIDCAPSLG LLTINALTASDYVIMPLECEFFALRGIALLTDTIEKVQDRLNPDLEVLGILGTMFDPRTL HAREVMERVVQAFGDVVFHTVIKRTIKFPETTVAGEPITSYASSSPGAQAYRDLAKEVLA RCRAA >gi|302034487|gb|GL383264.1| GENE 611 600629 - 601549 494 306 aa, chain - ## HITS:1 COG:Cgl1385 KEGG:ns NR:ns ## COG: Cgl1385 COG4974 # Protein_GI_number: 19552635 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinase XerD # Organism: Corynebacterium glutamicum # 9 305 7 304 304 268 52.0 1e-71 MTSLVGGQAEDYLRHLVVERGLSDNTVQAYRRDLLRYQEYLGSRGIGSLAEVTRVDVEEF RRHLDHIGLAPASVTRCVVAVRNLHRFAVGSGQLQADVTAGMSPGTRSRRLPKALSMDQV ESLLAAPDTSTVEGLRDAALLELLYGTGARVSEVCALDVDDIRPVLDDPDLGLRLIGKGD KERIVPLGSYAAKAVDAWLIRGRPAWAEIGNGEHALLLNTRGRRLSRQSAWAVIRRAGEA AGLDVEHLSPHSLRHSYATHLLDGGADVRVVQELLGHSSVTTTQIYTLVTADHLREVYRS SHPRAV >gi|302034487|gb|GL383264.1| GENE 612 601546 - 602205 343 219 aa, chain - ## HITS:1 COG:Cgl1384 KEGG:ns NR:ns ## COG: Cgl1384 COG0494 # Protein_GI_number: 19552634 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Corynebacterium glutamicum # 31 186 32 184 223 129 44.0 5e-30 MSQERWDKDEYWQVVDHQVKATGQVCDFIDDAVITPSGERINRQYVSHPGAVGIIALDDQ DRVAVVRQYRHPVRMVLVEPPAGLLDVEGEDFLAAAQRELAEEAMLSADDWRVLVDIVTT PGGCQESLRIYLARGLHEVPRPEGFLLEGEEVSMKAGWEPLDDLVEAIYAGQCQSPTLVT GVMALELARRTDRVNELRPAHAPWPIRERPGGIDGVRAE >gi|302034487|gb|GL383264.1| GENE 613 602202 - 603890 1601 562 aa, chain - ## HITS:1 COG:ML1363 KEGG:ns NR:ns ## COG: ML1363 COG0504 # Protein_GI_number: 15827710 # Func_class: F Nucleotide transport and metabolism # Function: CTP synthase (UTP-ammonia lyase) # Organism: Mycobacterium leprae # 8 546 9 551 590 781 71.0 0 MGTDNHCSKHVFVTGGVVSSLGKGLTASSLGSLLKARGLKVTMQKLDPYLNVDPGTMNPF QHGEVFVTEDGAETDLDIGHYERFLNENLSGQANVTTGKVYSAVIAKERRGDYLGDTVQV IPHITNEIKERMLAMEEGHPDVVIHEIGGTVGDIESLPFLEAARQVRHEIGRENVFFLHV SLVPYIKPSGEMKTKPTQHSVAALREVGIQPDAIVCRSERPIGKGIKSKIALMCDVEGPA VVSCPDAPSIYLIPKVLHREGLDAYVVQKLSLFFRDVDWTTWDDLLDRVRKPRSEVTVAL VGKYIDLPDAYLSVTEALRAGGFANKAKVNVVWVASDSCATAEGAAQQLRDADAICVPGG FGIRGVEGKVGAIRYAREHKVPFLGLCLGMQCAVIEVARDLAGIKDAASSEFDSQTPDPV IATMAEQVEAVAGKADLGGTMRLGAYPAKLAKDSLVAELYGTTTVTERHRHRYEVNNAYR DRLEQAGLRISGTSPDGGLVEFVELDRQTHPYFVATQAHPELKSRPTHAHPLFRGLVAAA VGHAKAASKGAAKESSTKVADK >gi|302034487|gb|GL383264.1| GENE 614 604063 - 604272 104 69 aa, chain - ## HITS:1 COG:no KEGG:PPA1391 NR:ns ## KEGG: PPA1391 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 69 1 69 69 119 100.0 4e-26 MNRCDVSRRISVIHSEQRSRSMNFDPDVVRREISMMYPYDPEYPWPGYSPEVMDGSLSWR MPDDLVVVE >gi|302034487|gb|GL383264.1| GENE 615 604208 - 604441 121 77 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDLERCSLCMTEMRRETSHRFIHQVCTHLLLGGGSISSHPSATKYIDSTSTAIGVASLIS RMRSAITSIVFTPGLWT >gi|302034487|gb|GL383264.1| GENE 616 604419 - 604640 180 73 aa, chain - ## HITS:1 COG:no KEGG:PPA1393 NR:ns ## KEGG: PPA1393 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 73 1 73 73 140 100.0 2e-32 MGRLDHFEKSNAFIMEATVVTLSTSAEIETAIYLDPVDVGRFVDTDELAILMTCAQMHGH YHIRCPIMSRVRA >gi|302034487|gb|GL383264.1| GENE 617 604656 - 606335 977 559 aa, chain - ## HITS:1 COG:Cgl1380 KEGG:ns NR:ns ## COG: Cgl1380 COG0497 # Protein_GI_number: 19552630 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Corynebacterium glutamicum # 1 555 1 573 593 273 36.0 5e-73 MIRSVRIRGLGVIDETVLEPSSALTAVTGETGAGKTMVVTGIGLLLGDKADTGLVRHGCD RAVVEAVLDTPDAGRVSELGGTVEDGEVICARHITSRRSRALLGGAQVTASQLAHIVGDQ VTIHGQSEQVRLVDAARQLDVVDRAAGDELAGYLSRHAQLWSEFRAASQRLQRLNEDRAG AEMEREVLTRRVSEVDAVDPKPHEDDDLIAEMAGLQAAQSIRESLNKADVLLNGVETSTG PQPGALALLEQAVHELDGTGDADPHAAELAERARQMSYDLTDLAASVAGHAARAEADPQR LEELGGRLAAIQRLLRARTTTLDDLLDSTAADRHRLAELDPGATDLDFLGQQVEQLRFEL RRSADHMSAVRRRTAVRLAAEVRPELAALAMPHARLEFRVEPAPMGPRGADSVTIMLAAN PGSDLAPLAKAASGGELSRVRLALEVVVAQPQVPQTFVFDEIDSGVGGTVGIEIGRRLRQ LARRHQVIVVTHLAQVAAFADTHVVITKASDGAITSSGLREVTGSDREIELSRMMSGMVD SESGLEHAHDLLREAGEMD >gi|302034487|gb|GL383264.1| GENE 618 606332 - 607288 274 318 aa, chain - ## HITS:1 COG:MT1734 KEGG:ns NR:ns ## COG: MT1734 COG0061 # Protein_GI_number: 15841152 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar kinase # Organism: Mycobacterium tuberculosis CDC1551 # 15 306 5 305 307 232 44.0 8e-61 MGRYCGLVNDTSPSRYVVVVTHATRDDAFDAAAEFISEMAGRDIGCAVPDDQAKPMLSKL PGIDLESLGEFAHEAEVVVVFGGDGTILRAAEWSLPRHVPMIGVNLGHVGFLAELERSDM ADLVNKVCSRDYTVEDRLVLKTTVTEHSGQHRWSSFAVNELSLEKAARRRMLDVLASVDE LPVQRWSCDGILVSTPTGSTAYAFSAGGPVMWPDLDAMLMVPLSAHALFARPLVMSPAAR VDLDIQPDGSESAVLWCDGRRSCTVRPGERITVVRHPDRLRIARLAAQPFTSRLVKKFEL PVSGWRQGRDRHHLEETS >gi|302034487|gb|GL383264.1| GENE 619 607307 - 608083 463 258 aa, chain - ## HITS:1 COG:ML1358 KEGG:ns NR:ns ## COG: ML1358 COG1189 # Protein_GI_number: 15827705 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted rRNA methylase # Organism: Mycobacterium leprae # 14 253 5 243 269 187 49.0 1e-47 MDAPRSRRWQSVPVRLDQALVEAGLARSRTLATRLVREGRVTVNRVVVTKPAMKVSTADV LVADEEVWVSRGAHKLLGALDILGVQVPSRVLDAGASTGGFTQVVLSRGAKLVHAVDVGH DQMSPVLRNDPRVIVHEGLNLRDLQPADLAVDGVVEPVDLVVGDVSFISLTMILEPMSAV VSPDGLMLLLVKPQFEVGRKALGAHGVVTDPALRLQAIAGVMAAAVDLGWRMRDECDSPL PGQDGNVEHFVLLERTGR >gi|302034487|gb|GL383264.1| GENE 620 608367 - 608987 467 206 aa, chain - ## HITS:1 COG:Cgl1915 KEGG:ns NR:ns ## COG: Cgl1915 COG0619 # Protein_GI_number: 19553165 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Corynebacterium glutamicum # 9 205 6 202 203 62 29.0 7e-10 MKTDASAFFGGYRAGNSPAHRMPVWSKYLLVLLVGVTPFFVKQWWFSLGCLVVAVVINLV VARIPVRTALSIGVPLWIANALILAYHCFFTMWQRGVIYVAGLLACLYIARLVTCTTDPG ALMDAIVALARPLRPLGAKPEKFALTIALMWTTIPYLVGSIGQVRDAAKARGLERYSWRF LIPMFVGAVGHALEIGEALKARGLGG >gi|302034487|gb|GL383264.1| GENE 621 608984 - 609652 235 222 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 10 209 160 364 398 95 32 5e-18 MNLIVSERRVAVIGPNGAGKSTLLRLVNGLVEATDGTVTVDGINPSEDGRAARRHVGYIF TNPMSQLVMSTPVADVELSLRQRIRNRLERHEAAMQILADQGLEAVAGRSVHALSGGERQ LVSLASVLAVEPSVILADEPTTLLDLRNREMVRHAFERLDQQILCCTHDLELAASFDRVL AVEDGRIVDDGDPGEVIADYRARMVSGQGGVVPRRGGQDKSR >gi|302034487|gb|GL383264.1| GENE 622 609733 - 610302 520 189 aa, chain - ## HITS:1 COG:Cgl1913 KEGG:ns NR:ns ## COG: Cgl1913 COG1268 # Protein_GI_number: 19553163 # Func_class: R General function prediction only # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 8 185 32 207 212 76 38.0 3e-14 MSSRNGFQATDLALIAVFAALVAVLAVIPPMFMVGAVPFALQMVAVMLAPMVLGSIRGGC AVSLYILVGALGLPVFSGGSSGIGVLVGPTGGYLWGWLIGAFVAGAVATSVLRRRPRKSM LPVWLFVVALVDLVCVYLGGIFGLMGFAKLSLNAALAANLVLFGLDVVKGILACLIATAV LTAFPRLMP >gi|302034487|gb|GL383264.1| GENE 623 610373 - 611371 611 332 aa, chain - ## HITS:1 COG:MT1731 KEGG:ns NR:ns ## COG: MT1731 COG0647 # Protein_GI_number: 15841149 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar phosphatases of the HAD superfamily # Organism: Mycobacterium tuberculosis CDC1551 # 4 308 3 307 353 195 41.0 1e-49 MSDALIDEHDAALFDLDGVVYLGPDPVPAAPDTIAELRRRGVKVGFVTNNAARSAEVVAQ HLTDIGIPTEPSDVVTSGQAISDLAADTLPAGARVLIVGTESLRDEARARGLQPVESARD DPVAVIQGYDSQIAWPLLEEAGFALQAGAMWYAANPDITRPTDRGIVPGIGAQLQVVATT CNAEPVIAGKPYRPLLEATISRLRSTSPIFVGDRLDTDVRGANTMDVDSLFVFTGSHGVA DVLAAAPEDRPQNIAADLSGLLEPKREVDVSGDRARCGGSIVSVHADREVRAESTPDDIC GQLDAVAAMMALVYGSNVTIPDDAGRLFDKLH >gi|302034487|gb|GL383264.1| GENE 624 611368 - 612546 508 392 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4452 NR:ns ## KEGG: HMPREF0675_4452 # Name: not_defined # Def: tetratricopeptide repeat protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 392 7 398 398 524 99.0 1e-147 MADSSSPNNGRSGGGRRGPGRNGWSSKSGGRGGWTSKSRDRRGDHERRGGDSGRRWADDR KPRRDGGRRWDDDRKPQRKGDADRRWRDDRDSRRDDQRRRDFRGNRWDDKDQHDSRRDVR KDGRGDGHRDDRSVDNTAVQPTETPASGEPMAPLDFDEKALPAPVRAELRGVPADTAHII EGHLVAAAELLDEDPAQANAHAQAARRRAPRLPILREVAAEAAYQAGEYASALNDYRALR RMTGNDNFLPVIADCERALGRPQAALRLIREGQEAGLNPAQQIELVLVQAGARRDLGQRD EAVRLLREAVKNLKAPTEATARLHYAYAETLLEEGDTAGARKWFVSAQRHDPANFLDSQD RIDIIDGREPSGDPADDMLFIEDDNEGEETDQ Prediction of potential genes in microbial genomes Time: Thu Jul 21 06:33:15 2011 Seq name: gi|302034486|gb|GL383265.1| Propionibacterium acnes HL025PA2 genomic scaffold Scfld23, whole genome shotgun sequence Length of sequence - 5089 bp Number of predicted genes - 5, with homology - 5 Number of transcription units - 3, operones - 1 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 971 684 ## PPA1880 putative adhesion or S-layer protein + Term 1002 - 1036 7.0 + Prom 1028 - 1087 2.7 2 2 Tu 1 . + CDS 1124 - 1654 362 ## HMPREF0675_4934 hypothetical protein + Term 1678 - 1741 1.6 + Prom 1707 - 1766 1.9 3 3 Op 1 56/0.000 + CDS 1918 - 2340 718 ## PROTEIN SUPPORTED gi|50840934|gb|AAT83601.1| 30S ribosomal protein S12 4 3 Op 2 51/0.000 + CDS 2344 - 2814 799 ## PROTEIN SUPPORTED gi|50843330|ref|YP_056557.1| 30S ribosomal protein S7 5 3 Op 3 . + CDS 2947 - 5040 2262 ## COG0480 Translation elongation factors (GTPases) Predicted protein(s) >gi|302034486|gb|GL383265.1| GENE 1 3 - 971 684 322 aa, chain + ## HITS:1 COG:no KEGG:PPA1880 NR:ns ## KEGG: PPA1880 # Name: not_defined # Def: putative adhesion or S-layer protein # Organism: P.acnes # Pathway: not_defined # 32 322 1 299 299 460 96.0 1e-128 GGAVFLAQLPDPWLSEECLRRCMALTERFPIVKKHVIGASLTGLALALTPFAGAASAHAT LPDYFGIDAPDHVDVNKPLNFRLDKCDMDGASQIKWGVAKGESAPPETWTTVKDEQQRVS YTPTSTGTYTIWAYCANVSGERVSDSGSSSFTSYSTKATMNPTKWAADEYVRMVTKGFNS SDTLSASLVRDGDTKDYGDLLDSQRIWYQWASETSDFTFPGNVPVGDYTLTFTDHGNTAR TVRVHLHHGAGYLLSGDTPTPTPTPTLKPTPTPTPAPTSGEATVKPVPGAATTSAATVVT DGSDQGVVRVAGGLGTLPHTGV >gi|302034486|gb|GL383265.1| GENE 2 1124 - 1654 362 176 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4934 NR:ns ## KEGG: HMPREF0675_4934 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 176 1 176 176 260 100.0 2e-68 MKRTVLAGAVAACLGMAVFAVTTPDARAESAPIPVPTSKATAHSRLANRPSSGITWSPRH HGIVPPEIHGGTIYLPDISAGPIILPTIKGGTITLPDIKGGTITLPDISGRPIILPKIEG GAVSIPPIVFPSLHARGSIQVNGTLPGWANGRGNFLAAGGMGAPAGRPMSLPQTGA >gi|302034486|gb|GL383265.1| GENE 3 1918 - 2340 718 140 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50840934|gb|AAT83601.1| 30S ribosomal protein S12 [Propionibacterium acnes KPA171202] # 1 140 1 140 140 281 99 1e-75 MRSQGIPNPPDGKRYQPVPTIQQLVRKGRTDKISKNKTPALKGSPQRRGVCTRVYTTTPK KPNSALRKVARVRLSSGIEVTAYIPGVGHNLQEHSMVLVRGGRVKDLPGVRYKIVRGSLD TQGVKGRKQARSRYGAKKEK >gi|302034486|gb|GL383265.1| GENE 4 2344 - 2814 799 156 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50843330|ref|YP_056557.1| 30S ribosomal protein S7 [Propionibacterium acnes KPA171202] # 1 156 1 156 156 312 100 4e-85 MPRKGPAPKRPVMVDPVYGSPLVSQLVSKILLDGKKTVAQNIVYTALEGCRAKNNTDPVQ TLKRALDNIKPSLEVKSRRVGGATYQVPVEVKPARQTTLAMRWLVNFSRERREKTMAERL MNEILDASNGLGASVKRREDTHKMAEANRAFAHYRW >gi|302034486|gb|GL383265.1| GENE 5 2947 - 5040 2262 697 aa, chain + ## HITS:1 COG:ML1878 KEGG:ns NR:ns ## COG: ML1878 COG0480 # Protein_GI_number: 15828005 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Mycobacterium leprae # 4 695 8 700 701 950 68.0 0 MAKTDLSKVRNIGIMAHIDAGKTTTTERILYYTGKSYKIGEVHDGAATMDWMEQEQERGI TITSAATTTFWHDTQINIIDTPGHVDFTVEVERSLRVLDGAVAVFDGVAGVEPQSMTVWR QAAKYGVPRICYINKLDRTGASFDHCVKTIKERLHAIPVLLQLPIGAEDQFMGIVDLVEM NAKTWRGETELGAHYETEDIPADMKDEAKAARAEMLETVAENDEEFMELYLEDPDAVTVD QVKAAIRRGVLASAFTAVTCGTSFKNKGVQPLLDAIVDYLPSPTDVPAISGFKPGDESVE LERRPCDDEPLSILAFKIASDPHLGKLTFVRVYSGVLHAGDQVLNATKGKKERIGKIYQM HANKREEIESIGAGMICAVMGLKDTTTGETLCDQTNPIILESMTFPAPVIEQAIEPKSKA DQEKLSNAIQRLVEEDPTFRVHTDEETGQTIVAGMGELHLDVFIDRMKREFHVEANIGKP QVAYRETLRKPVEKYEYTHKKQTGGSGQFARVIIAIEPKEPGFGYEFVNAVTGGRIPKEY IPSVDAGVQESMQFGVLAGYPVEDVKVTLLDGAYHEVDSSEMAFKIAGSMAFKEAARKAN PGLLEPLMAVEVTTPEDYLGTVIGDLNSRRGQIQEMVEEHGNKVVRALVPLSEMFGYVGD LRSKTSGQASYSMEFDSYGECPSSVADEIIAKANGGK Prediction of potential genes in microbial genomes Time: Thu Jul 21 06:33:55 2011 Seq name: gi|302034485|gb|GL383266.1| Propionibacterium acnes HL025PA2 genomic scaffold Scfld28, whole genome shotgun sequence Length of sequence - 90605 bp Number of predicted genes - 88, with homology - 82 Number of transcription units - 39, operones - 22 average op.length - 3.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 335 - 1810 1136 ## COG0671 Membrane-associated phospholipid phosphatase + Term 1824 - 1891 10.4 - Term 1815 - 1870 14.4 2 2 Op 1 1/0.125 - CDS 1883 - 2194 274 ## COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 3 2 Op 2 . - CDS 2243 - 3103 563 ## COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 4 3 Op 1 . + CDS 3418 - 3597 57 ## gi|313763318|gb|EFS34682.1| hypothetical protein HMPREF9567_02325 5 3 Op 2 . + CDS 3608 - 4045 276 ## HMPREF0675_5044 hypothetical protein 6 4 Tu 1 . + CDS 4192 - 6726 2282 ## COG0308 Aminopeptidase N 7 5 Tu 1 . - CDS 6736 - 8034 965 ## COG0477 Permeases of the major facilitator superfamily 8 6 Tu 1 . + CDS 8174 - 10426 1804 ## COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain 9 7 Tu 1 . - CDS 10413 - 12500 708 ## COG0147 Anthranilate/para-aminobenzoate synthases component I - Prom 12678 - 12737 2.5 + Prom 12574 - 12633 1.7 10 8 Op 1 . + CDS 12660 - 14993 1596 ## COG3256 Nitric oxide reductase large subunit 11 8 Op 2 . + CDS 14990 - 15787 293 ## PPA1974 hypothetical protein 12 8 Op 3 . + CDS 15784 - 16551 721 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs 13 9 Tu 1 . + CDS 16693 - 18036 1249 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases + Term 18121 - 18147 -0.7 14 10 Op 1 . + CDS 18221 - 19465 913 ## COG0477 Permeases of the major facilitator superfamily 15 10 Op 2 1/0.125 + CDS 19560 - 20510 852 ## COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase 16 10 Op 3 13/0.000 + CDS 20587 - 21087 455 ## COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase 17 10 Op 4 . + CDS 21084 - 22151 788 ## PROTEIN SUPPORTED gi|149378138|ref|ZP_01895857.1| Ribosomal protein S7 18 10 Op 5 . + CDS 22236 - 22490 189 ## HMPREF0675_5032 hypothetical protein 19 10 Op 6 . + CDS 22506 - 23462 691 ## COG2267 Lysophospholipase + Term 23474 - 23509 -0.5 20 11 Op 1 35/0.000 + CDS 23611 - 24918 1430 ## COG1653 ABC-type sugar transport system, periplasmic component + Term 24923 - 24969 6.4 21 11 Op 2 38/0.000 + CDS 25047 - 25943 796 ## COG1175 ABC-type sugar transport systems, permease components 22 11 Op 3 . + CDS 25943 - 26869 820 ## COG0395 ABC-type sugar transport system, permease component - TRNA 26907 - 26983 74.1 # Phe GAA 0 0 23 11 Op 4 . + CDS 26933 - 27178 64 ## + Term 27270 - 27305 0.8 - TRNA 27045 - 27118 85.8 # Asp GTC 0 0 - TRNA 27529 - 27604 60.3 # Glu TTC 0 0 24 12 Tu 1 . + CDS 27692 - 27904 95 ## 25 13 Op 1 . - CDS 27790 - 28956 231 ## PROTEIN SUPPORTED gi|145223395|ref|YP_001134073.1| NLP/P60 protein 26 13 Op 2 . - CDS 29091 - 29387 74 ## gi|313836177|gb|EFS73891.1| hypothetical protein HMPREF9621_01729 - Prom 29432 - 29491 76.7 + TRNA 29417 - 29490 84.6 # Lys TTT 0 0 27 14 Op 1 14/0.000 - CDS 29679 - 31001 1186 ## COG1653 ABC-type sugar transport system, periplasmic component 28 14 Op 2 38/0.000 - CDS 31012 - 31938 882 ## COG0395 ABC-type sugar transport system, permease component 29 14 Op 3 . - CDS 31931 - 32866 699 ## COG1175 ABC-type sugar transport systems, permease components 30 14 Op 4 . - CDS 32863 - 34362 1111 ## PPA1958 hypothetical protein - Prom 34571 - 34630 2.8 + Prom 34561 - 34620 1.6 31 15 Tu 1 . + CDS 34656 - 35789 599 ## COG1940 Transcriptional regulator/sugar kinase 32 16 Tu 1 . - CDS 35679 - 35999 70 ## 33 17 Tu 1 . + CDS 35953 - 37809 1413 ## PPA1955 hypothetical protein 34 18 Tu 1 . + CDS 37925 - 38704 731 ## COG0647 Predicted sugar phosphatases of the HAD superfamily - Term 38624 - 38662 1.1 35 19 Op 1 . - CDS 38783 - 40285 871 ## HMPREF0675_5014 phospholipase, patatin family 36 19 Op 2 . - CDS 40318 - 41283 812 ## COG0039 Malate/lactate dehydrogenases 37 20 Op 1 . + CDS 41131 - 41457 95 ## HMPREF0675_5013 hypothetical protein 38 20 Op 2 . + CDS 41458 - 42441 561 ## COG0053 Predicted Co/Zn/Cd cation transporters 39 20 Op 3 . + CDS 42527 - 42985 385 ## COG2131 Deoxycytidylate deaminase - Term 43010 - 43063 9.6 40 21 Op 1 9/0.000 - CDS 43069 - 43494 370 ## COG3412 Uncharacterized protein conserved in bacteria 41 21 Op 2 10/0.000 - CDS 43487 - 44143 473 ## COG2376 Dihydroxyacetone kinase 42 21 Op 3 . - CDS 44131 - 45132 823 ## COG2376 Dihydroxyacetone kinase 43 21 Op 4 . - CDS 45221 - 46498 1360 ## COG0477 Permeases of the major facilitator superfamily 44 22 Tu 1 . + CDS 46703 - 47590 780 ## COG1575 1,4-dihydroxy-2-naphthoate octaprenyltransferase 45 23 Op 1 . + CDS 47779 - 48027 225 ## PPA2362 hypothetical protein 46 23 Op 2 . + CDS 48054 - 48719 280 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 47 23 Op 3 . + CDS 48721 - 51006 1134 ## HMPREF0675_5003 hypothetical protein 48 24 Op 1 . - CDS 51109 - 52635 249 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 49 24 Op 2 . - CDS 52632 - 52895 153 ## HMPREF0675_5001 hypothetical protein 50 25 Op 1 . - CDS 53039 - 54787 1194 ## COG2251 Predicted nuclease (RecB family) 51 25 Op 2 . - CDS 54789 - 55457 362 ## PROTEIN SUPPORTED gi|163754278|ref|ZP_02161401.1| 30S ribosomal protein S15 52 26 Op 1 . + CDS 55667 - 56311 215 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 53 26 Op 2 . + CDS 56308 - 58044 1410 ## PPA1941 ABC transporter permease 54 27 Op 1 . - CDS 58110 - 59396 579 ## COG1169 Isochorismate synthase 55 27 Op 2 . - CDS 59473 - 59958 383 ## HMPREF0675_4995 hypothetical protein - Prom 60014 - 60073 3.0 56 28 Tu 1 . + CDS 59882 - 60037 57 ## 57 29 Op 1 . + CDS 60189 - 61451 1025 ## COG0644 Dehydrogenases (flavoproteins) 58 29 Op 2 30/0.000 + CDS 61548 - 61931 231 ## PROTEIN SUPPORTED gi|154175415|ref|YP_001407462.1| NADH dehydrogenase subunit A + Prom 61935 - 61994 58.0 59 30 Op 1 34/0.000 + CDS 62086 - 62652 423 ## PROTEIN SUPPORTED gi|154175216|ref|YP_001407461.1| NADH dehydrogenase subunit B 60 30 Op 2 22/0.000 + CDS 62649 - 63473 543 ## COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit 61 30 Op 3 15/0.000 + CDS 63473 - 64774 1139 ## COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7 62 30 Op 4 23/0.000 + CDS 64771 - 65556 760 ## COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit 63 30 Op 5 12/0.000 + CDS 65553 - 66887 1120 ## COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit 64 30 Op 6 18/0.000 + CDS 66884 - 69322 1645 ## COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) 65 30 Op 7 31/0.000 + CDS 69319 - 70641 1150 ## COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H) 66 30 Op 8 28/0.000 + CDS 70641 - 71237 481 ## COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 67 30 Op 9 30/0.000 + CDS 71237 - 72091 881 ## COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J) 68 30 Op 10 26/0.000 + CDS 72088 - 72387 355 ## COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) 69 30 Op 11 30/0.000 + CDS 72398 - 74284 1603 ## COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit 70 30 Op 12 22/0.000 + CDS 74302 - 75795 1360 ## COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M) 71 30 Op 13 . + CDS 75792 - 77408 1396 ## COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N) - Term 77253 - 77289 0.8 72 31 Tu 1 . - CDS 77414 - 77659 96 ## gi|313829355|gb|EFS67069.1| conserved hypothetical protein 73 32 Op 1 . + CDS 77601 - 78575 900 ## COG0142 Geranylgeranyl pyrophosphate synthase 74 32 Op 2 . + CDS 78606 - 79388 735 ## COG2243 Precorrin-2 methylase 75 32 Op 3 . + CDS 79424 - 80344 818 ## COG2301 Citrate lyase beta subunit + Term 80378 - 80413 -1.0 76 33 Op 1 . - CDS 80361 - 80792 280 ## HMPREF0675_4975 hypothetical protein - Term 80817 - 80848 -0.8 77 33 Op 2 . - CDS 80872 - 81183 352 ## HMPREF0675_4974 hypothetical protein 78 33 Op 3 . - CDS 81180 - 82574 587 ## PPA1916 ABC transporter permease 79 34 Tu 1 . + CDS 82555 - 82716 113 ## + Term 82749 - 82785 -0.2 80 35 Op 1 . - CDS 82688 - 83509 507 ## COG1131 ABC-type multidrug transport system, ATPase component 81 35 Op 2 . - CDS 83509 - 83751 304 ## HMPREF0675_4971 hypothetical protein 82 36 Op 1 . + CDS 83917 - 84846 366 ## HMPREF0675_4970 hypothetical protein 83 36 Op 2 . + CDS 84848 - 85468 185 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 84 36 Op 3 . + CDS 85465 - 86688 709 ## HMPREF0675_4968 efflux ABC transporter, permease protein + Term 86721 - 86761 9.6 - Term 86704 - 86754 12.1 85 37 Tu 1 . - CDS 86756 - 88738 1408 ## COG3590 Predicted metalloendopeptidase + Prom 88368 - 88427 1.9 86 38 Tu 1 . + CDS 88676 - 88876 61 ## 87 39 Op 1 . - CDS 89395 - 89991 472 ## PPA1908 protein associated to putative adhesion protein 88 39 Op 2 . - CDS 90009 - 90467 120 ## PPA1907 protein associated to putative adhesion protein Predicted protein(s) >gi|302034485|gb|GL383266.1| GENE 1 335 - 1810 1136 491 aa, chain + ## HITS:1 COG:STM3595_1 KEGG:ns NR:ns ## COG: STM3595_1 COG0671 # Protein_GI_number: 16766881 # Func_class: I Lipid transport and metabolism # Function: Membrane-associated phospholipid phosphatase # Organism: Salmonella typhimurium LT2 # 80 356 114 331 355 83 29.0 1e-15 MKVLRTSVLGLACATALVSSVGVSPAQAAQPDESADPHVALLSEYDRYWTPKPLDKQNFD TAFRGDVTPQGSKILARNDEGVEQINKAGVDEANQAADRQGRSQQWRALRDATMFTDPLQ EDNDSLGPVLSKYVAEGLAQCTPANVHSCSLTHVARFLWSTGFQEVTNKSTGAAKKYFNY PRPYLADRSFADSGNPNNLRGLKKNLAIARVPSRIDVNHKRGGRALLTAGYDLMDGASGT NLTVSQAFPSGHTTAAYAYGLAMAEILPELGPEILTRASEAGNNRAVLGVHYPMDIMGGR IEGHSNVSAALTTNRLYVASLKAARTEVMAYLTRRCEADGHGDTVQACIGNVGANDKNGY YNTFTDSVSTTPVVDRASALKAYRARMTYGFDKASAYGGPAPATTAPVVPTGAENLLSTA FPTLSDAQRRQVLAATEIDAGYALDSSSGGWQRINLAAAMSAKVTVGKAGHVVKIETGNI KPEVVSAPQAS >gi|302034485|gb|GL383266.1| GENE 2 1883 - 2194 274 103 aa, chain - ## HITS:1 COG:Cgl2954 KEGG:ns NR:ns ## COG: Cgl2954 COG1249 # Protein_GI_number: 19554204 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes # Organism: Corynebacterium glutamicum # 8 97 350 439 440 94 47.0 6e-20 MRQARESGRSVLVATKDVATIAAMPRPKIVGQTEGVIRVLVDADDHTVLGATLWCIDSQE LVNFVSLAMRLGVRYETLRDGIWTHPSSTEAFNEVLGVLEPLT >gi|302034485|gb|GL383266.1| GENE 3 2243 - 3103 563 286 aa, chain - ## HITS:1 COG:Cgl2954 KEGG:ns NR:ns ## COG: Cgl2954 COG1249 # Protein_GI_number: 19554204 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes # Organism: Corynebacterium glutamicum # 1 286 58 335 440 210 44.0 3e-54 MPTKDLIDSASKRDGRDPASYFTSAVADRDTLIATLNRTNHAMLEGKVLLLDGVASFTGP HTVKVVAGDDEITVRAETIIVNTGSHPANLPVPGADGPRVHDSTTIQHVDPLPSQLVIVG GGFIGLEFAQMFARFGSQVTLLEAGETFVPALDTDIAERVRNMLEGEGVTVVTGAQVTSC DETGDHVDVVTDDQTFAADAVLVAAGRRPATEDLDLTAAGVATDERGYITVDDQLRTNID GVYAVGDVNGGPQFTYISLDDNRVLWDTLHDGPRRRDDRVAVPAAS >gi|302034485|gb|GL383266.1| GENE 4 3418 - 3597 57 59 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313763318|gb|EFS34682.1| ## NR: gi|313763318|gb|EFS34682.1| hypothetical protein HMPREF9567_02325 [Propionibacterium acnes HL013PA1] hypothetical protein HMPREF9574_00269 [Propionibacterium acnes HL074PA1] hypothetical protein HMPREF9575_00681 [Propionibacterium acnes HL110PA1] hypothetical protein HMPREF9576_00677 [Propionibacterium acnes HL110PA2] hypothetical protein HMPREF9580_02482 [Propionibacterium acnes HL087PA2] hypothetical protein HMPREF9585_01441 [Propionibacterium acnes HL083PA1] hypothetical protein HMPREF9587_00957 [Propionibacterium acnes HL025PA1] hypothetical protein HMPREF9589_02250 [Propionibacterium acnes HL059PA1] hypothetical protein HMPREF9593_00263 [Propionibacterium acnes HL046PA2] hypothetical protein HMPREF9604_01016 [Propionibacterium acnes HL036PA1] hypothetical protein HMPREF9605_02559 [Propionibacterium acnes HL036PA2] hypothetical protein HMPREF9611_01108 [Propionibacterium acnes HL063PA1] hypothetical protein HMPREF9612_00537 [Propionibacterium acnes HL063PA2] hypothetical protein HMPREF9616_01475 [Propionibacterium acnes HL007PA1] hypothetical protein HMPREF9617_01919 [Propionibacterium acnes HL056PA1] hypothetical protein HMPREF9591_02261 [Propionibacterium acnes HL086PA1] hypothetical protein HMPREF9597_00113 [Propionibacterium acnes HL005PA4] hypothetical protein HMPREF9598_00380 [Propionibacterium acnes HL050PA1] hypothetical protein HMPREF9600_00794 [Propionibacterium acnes HL050PA3] hypothetical protein HMPREF9606_01043 [Propionibacterium acnes HL036PA3] hypothetical protein HMPREF9608_02194 [Propionibacterium acnes HL067PA1] hypothetical protein HMPREF9609_00795 [Propionibacterium acnes HL027PA1] hypothetical protein HMPREF9613_00007 [Propionibacterium acnes HL002PA1] hypothetical protein HMPREF9614_00004 [Propionibacterium acnes HL002PA2] hypothetical protein HMPREF9618_01696 [Propionibacterium acnes HL082PA1] hypothetical protein HMPREF9620_00214 [Propionibacterium acnes HL037PA1] hypothetical protein HMPREF9564_01471 [Propionibacterium acnes HL053PA1] hypothetical protein HMPREF9566_01179 [Propionibacterium acnes HL045PA1] hypothetical protein HMPREF9573_01276 [Propionibacterium acnes HL072PA2] hypothetical protein HMPREF9594_00877 [Propionibacterium acnes HL005PA1] hypothetical protein HMPREF9595_02213 [Propionibacterium acnes HL005PA2] hypothetical protein HMPREF9596_02462 [Propionibacterium acnes HL005PA3] hypothetical protein HMPREF9565_00005 [Propionibacterium acnes HL053PA2] hypothetical protein HMPREF9569_01449 [Propionibacterium acnes HL078PA1] hypothetical protein HMPREF9610_01189 [Propionibacterium acnes HL027PA2] hypothetical protein HMPREF9615_02560 [Propionibacterium acnes HL002PA3] hypothetical protein HMPREF9572_00139 [Propionibacterium acnes HL072PA1] hypothetical protein HMPREF9583_02290 [Propionibacterium acnes HL038PA1] hypothetical protein HMPREF9590_01258 [Propionibacterium acnes HL059PA2] hypothetical protein HMPREF9592_00114 [Propionibacterium acnes HL046PA1] hypothetical protein HMPREF9601_00081 [Propionibacterium acnes HL030PA1] hypothetical protein HMPREF9602_00462 [Propionibacterium acnes HL030PA2] hypothetical protein HMPREF9337_02395 [Propionibacterium acnes HL096PA3] hypothetical protein HMPREF9338_01143 [Propionibacterium acnes HL096PA2] hypothetical protein HMPREF9344_01369 [Propionibacterium acnes HL097PA1] hypothetical protein HMPREF9571_02595 [Propionibacterium acnes HL043PA2] hypothetical protein HMPREF9570_01750 [Propionibacterium acnes HL043PA1] hypothetical protein HMPREF9568_00669 [Propionibacterium acnes HL013PA2] hypothetical protein HMPREF9581_01508 [Propionibacterium acnes HL087PA3] hypothetical protein HMPREF9586_02371 [Propionibacterium acnes HL083PA2] hypothetical protein HMPREF9584_01992 [Propionibacterium acnes HL092PA1] hypothetical protein HMPREF9588_02472 [Propionibacterium acnes HL025PA2] hypothetical protein HMPREF9563_01302 [Propionibacterium acnes HL020PA1] hypothetical protein HMPREF9579_00203 [Propionibacterium acnes HL087PA1] hypothetical protein HMPREF9343_00699 [Propionibacterium acnes HL099PA1] # 1 59 1 59 59 122 100.0 1e-26 MNTLALVAKMSGRFRGHTDRGFHRDAPSFCLGQPSWILQEVLVSWIFIYLSGVWLHCEN >gi|302034485|gb|GL383266.1| GENE 5 3608 - 4045 276 145 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5044 NR:ns ## KEGG: HMPREF0675_5044 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 145 1 145 145 286 100.0 3e-76 MRSPRFLVVVTACVLFCFGLAGCSTIQSETDEDAAACADYAVPDALRKKLDSRGLTSPAA RADAAQTWFNETRPVDILIGGYWVVRSRRGTRFRVDFYRHMKSGSLLPPDAGKSASSVAC RIYDVAHGVTVQQVDCPKESLDQLP >gi|302034485|gb|GL383266.1| GENE 6 4192 - 6726 2282 844 aa, chain + ## HITS:1 COG:ML1486 KEGG:ns NR:ns ## COG: ML1486 COG0308 # Protein_GI_number: 15827782 # Func_class: E Amino acid transport and metabolism # Function: Aminopeptidase N # Organism: Mycobacterium leprae # 2 844 5 860 862 596 42.0 1e-170 MNLTREEARHRSEIIKVERYHVRIDVRGADADGATHFTSNTRVRFSTTEPDTFLDLLDGE IESVIVNGEEVEPEYDGSRIQLHGLHTHRENLVIVTAKLPYQHTGQGLHRFVDPADGKVY LYTHFEAADSRRMYSVFEQPDLKAHVDFDVIAPSDWRVASNQVHEDIREEEDGLLHDFAL TPRMSTYLTAIAAGPYVRFQDEWHSRDGSESIPLGILARASLAEYVDHEEIFKITKQGLA FYHRTFGYPYPWGKYDQIFVPEYNLGAMENPGLVTFTENYIHRGPATRSELAGRTNTILH EMAHMWFGDLVTPKWWDDLWLKESFAEYMGAHASVAGTEYREAWTNFAVGRKAWAYTADQ QSTTHPIVADIVDLEAARQNFDGITYAKGASVLKQLVAHVGVERFFSAARHYFRELAFSS ATLDDLIRHLEKACGRDLSAWVDAWLKTAGPDVLLPELTISDGVVSELAVVRDSIDVRTG RDVNRPHTLRVGLYSLHGEDLVRTNLIDLTISSPRTPVPEAAGKPAPDLILINDDDLTYA KVRLGATGTKTVLAHLSGLADPLARALVWSMLWNSVRDAKLKVQDYLDAVAAHGPKETEP AILATVLQQLRMAVENYLPDSARKTARRAEAARAWQGLDESELGSDLQRLWARHALALSA TDPDSAGRVRGLLDGNVAGLVVDPEMRWQSWMALAALGQASVEDLDAELERDHTKTGVAH HMAALTARPDDAAKQEAYRRLRTPGELSNEHCLALIEGLRTPLGAQTFANLNGSYFDDLE QIWQEFPIEMAQRLVVGLFPDGDTAETADRWLASHQSATGGLTRMVRERRDAASRAETAR DFNS >gi|302034485|gb|GL383266.1| GENE 7 6736 - 8034 965 432 aa, chain - ## HITS:1 COG:Cgl2173 KEGG:ns NR:ns ## COG: Cgl2173 COG0477 # Protein_GI_number: 19553423 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Corynebacterium glutamicum # 16 397 3 387 408 205 33.0 2e-52 MTWVVWITAVIAYGFAVMQRTSLGFMGLTAAAHFNAPASVVATFMVLQLAVYAVLQIPAG ITVDRLGSRVVITAGSIVMTVGQVVMALTGSVGGAVLARVLVGCGDAFIFGAAIRLVPAW FPPKQTPLVTQLTGLLGQFGQVVSAVGLVAMVNSSGWRSTYLLAAGGAAVAAALAFLLIR DAPPGVEPERTDGNVKQLPHQVAEVISHPSTRLAFWAHMSSNFAGIVFSLMWGMPYLTHA EGRSTATASTLMTVYVIANAIAGPTAGILTSRHPIRRGTLIEAMIAASAVAWLIVLVWPG PAPLWMLFLLVICLGISLPGGNVGFDVARTFQPGNRLATATGVAITGGFFFGLLEIEIIG LLLDMLCPGGRYTLSGFRWAMSTQLVLFAIGLAGLEVNQRRLYQIMADNGVTVPTWREAL ARQWRVVKQRRR >gi|302034485|gb|GL383266.1| GENE 8 8174 - 10426 1804 750 aa, chain + ## HITS:1 COG:Rv0803 KEGG:ns NR:ns ## COG: Rv0803 COG0046 # Protein_GI_number: 15607943 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain # Organism: Mycobacterium tuberculosis H37Rv # 1 749 1 754 754 894 62.0 0 MADTVENAVSTPDVEQPWAELGLSADEYQRIREILGRRPTGGELAMYSVMWSEHCSYKSS KKYLRRFGDLPQQTPLGPLLAGIGDNAGVVDIGNGLAVTFKAESHNHPSYVEPHQGAATG VGGIVRDIMAMGARPVGVMNALAFGPLDAPDTARVLPGVVSGIADYGNCLGLPTIGGQTL FDPTYYGNPLVNALCVGVLRHEDLQFAKASGVGNLVVLFGAATGGDGIGGASILASESFA AEGESKRPSVQVGDPFMEKLLIECTLDLFNAGVVEALQDFGAAGISCATSELASAGDGGM HVELDRVPLRDPNLAPEEILMSESQERMAAVVRPDQLDRFMEICAHWGVAATVIGEVTDT GRLHIDWQGERIVDVDPRTVAHDGPVLDMPAARPWWIDELNEDDANALPRDNSGEGLAGA LLALAGSAQLCDRSWITDQYDRFVRGNTVLAQPNDAGMIRIDDNLGIALSLDANGRQTTL NPYLGAQLALCEAYRNVAVSGATPVAVTDCLNYGSPYDPDVMWQFDETILGLVDGCRELG VPVTGGNVSLHNRTGDESIRPTPLVGVLGVIDDVHRRIPSAFAHDGDAVLLLGTTKCEFG GSVYEDVIHAGHLGGMPPMPDLNAEKALAAVMVEASKRGLLSSAHDLSDGGLAQALVESC LQGGLGVSVSLPEGEPSVMLFSETPARAIVSLCGNGYREFKELCQEHGVPTARIGEVIDH GEIEVNGLFSLPLDEIERAWRKPIPTAMGE >gi|302034485|gb|GL383266.1| GENE 9 10413 - 12500 708 695 aa, chain - ## HITS:1 COG:alr3443_2 KEGG:ns NR:ns ## COG: alr3443_2 COG0147 # Protein_GI_number: 17230935 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component I # Organism: Nostoc sp. PCC 7120 # 218 685 25 493 514 330 42.0 7e-90 MILLVDNHDSFTFNLAHLLAEVSGIEPVVVRPEEVERAGILRRLADGEFDHVVIGPGPGS PHNDKDFKTAGQVIDASNKLPLLGVCLGHQGLGLRHGAQLQTIRPHHGIVSRIHHSRRGI FAGLPQDFEATRYHSLCLTTLGDQIVEHARAEDGAIMAFEVADRPHWGVQFHPESVMTQV GCQLMTNFLAIGSQPRHSEVRDKREPRNIQSRKCARTTARWTIHHQTVDIDLDEEATFSR LAGDGDAFWLDSATTRGDTGRWSVMGTASGAASELVSYDVITNTLTVNGRTQSGDVLDFL ERRLADGVSRRDPELDDIPFTGGYVGFLGYECKALTLGPNAHCSELPDAMWMRPASWIAY DHYRHHAHLLALDDRDTPGCNEAADLLDALAATLVKRPGSSEEPAPLTVPVEGSWRLSRG GYQDRVAAIQQALTRGDSYEACLTDTWTSRCDVDGWRLYRALRRRNPAPYGAYLRFTDPR VEVCSSSPERFLRVRDGIAESKPIKGTMARCDDPVEDARGIVDLQHDAKNRAENLMIADL VRNDLSRVCQPGTVEVPRLMAIESYATVHQMVTTVRGRLREDVGLVDVLRATFPGGSMTG APKERSVEILDGLEVGARGIYSGILGYLGFDRTADLSIVIRTVIRTGSQVTVGAGGAIVA ASQPDEEWREKNLKAAAPLAALTLSAGPGIPVTPP >gi|302034485|gb|GL383266.1| GENE 10 12660 - 14993 1596 777 aa, chain + ## HITS:1 COG:RSp1505 KEGG:ns NR:ns ## COG: RSp1505 COG3256 # Protein_GI_number: 17549724 # Func_class: P Inorganic ion transport and metabolism # Function: Nitric oxide reductase large subunit # Organism: Ralstonia solanacearum # 26 731 11 730 756 447 38.0 1e-125 MGDEGKKPEDTRRRPMVVSKGWVQGIALVMILGFTVMGILAYHTYNDSIPIPDKVVSTTG EVLFTHDDIVAGQEAFNNRGLMEYGSIVGHGGYLGPDFTADYLRRAATLTLDVRIKAREN QPHQANIKDWRTNRYDSRTGVLVLSRQQTAAYHHLVSYYTTYFGRNSHNLGLLADDIKGP AQARHLTDFFAWTAWGAAADRPGHSYSYTNNWPADPTVANRPTADMVVWSVLSLIVLIGG TGVMFAIYGRWSKNIGWHESETPSLSFIPPSQVGLTKSQRATSWFLFVIAVLFLFQTLVG AAAEHYRADISSFFGFDLAAWLPYNLARTWHVQLALFWTAAAFLAGGIFLAPFVSGKEPR RQHVLTYVLLGAVAFVVFGSLTSEALSVYGVSWAKGPVFGQQWEYIDLSKMFQLLLTLGM FLWVFIIWRAMHTRMRAESFGNMPWVFFFSALSIPMFYAVGLLAGTHTQLSVAEFWRFWV VHLWVEDFLELFTTVMVAYIFVMLGVVREKVALGVIYMDVILYSAGGVLGTMHHLYFSGT PSAHMAIGAFFSAAEVIPLTFLTVEAWGFMQLGARRESRSSTPFPHRWTVMFLVAVGFWN FVGAGVFGFLINLPIVSYYEIGTALTANHAHGAMMGVYGMMAMALAMFALRYLIPAWNDR LAKISFWCTNIGLAWMVVVTLLPLGILQLYHSVDAGYFEARQLNYITEHRNVVLEWLRMP GDLVFIIGGVLPFLWMTFQGLMHHREGRTVDELPVERLFIEEAPGEQGHAELPEATR >gi|302034485|gb|GL383266.1| GENE 11 14990 - 15787 293 265 aa, chain + ## HITS:1 COG:no KEGG:PPA1974 NR:ns ## KEGG: PPA1974 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 265 1 265 265 524 100.0 1e-147 MSPSLQVVLTCCYSLFLLTVAWLLDVLGRHSARMSREWKTTNFVYHDDRDGWKCHEDHWL WPASFDPQKRVVRYRGQHEICGRCPVKDTCSPTMTVREVTMPVDPWPYSEAGLFHRGMTV CVMVAALALPGGMLFVARTVAEVVTLIATIAIVCLALVPTAASIRRRPVDIPEGLPLETS VPDTGTAHDDGRVRVLGVHGQATTDRAGDEADRLIARYGSRWRSGRTRYRSVEQAAAVEA EVRGTYDRGRYYRGADDVDADRSRT >gi|302034485|gb|GL383266.1| GENE 12 15784 - 16551 721 255 aa, chain + ## HITS:1 COG:RSc0802 KEGG:ns NR:ns ## COG: RSc0802 COG0330 # Protein_GI_number: 17545521 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Ralstonia solanacearum # 8 246 6 244 249 255 51.0 6e-68 MSDLEWTFTTIALVILVIGFLISSFKIIPEYERGVVFRLGKLRGLHGSGLVFIFPGLDKL HRVDQRTVTLTIPPQEIITRDNVPARVNAVVLFNVTDPMDAVMNVENYAIATSQIAQTTL RSVLGRADLDTLLAHREELNTDLREIIEVQTHPWGVDVSVVEIKDVEIPEAMQRAMAREA EAERERRAKVINARGEMQASGELRQAADELSKSPASLQLRYLQTLLELGADQNSTVVFPL PMDILAPFLRKDHGN >gi|302034485|gb|GL383266.1| GENE 13 16693 - 18036 1249 447 aa, chain + ## HITS:1 COG:MT2598 KEGG:ns NR:ns ## COG: MT2598 COG0624 # Protein_GI_number: 15842054 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Mycobacterium tuberculosis CDC1551 # 22 433 39 448 470 400 52.0 1e-111 MDLSHTFKDLSAKVDSGFDDAVEQLTRHVAVRSVSSQRPDGVRSGAEFVAAAAKEAGAAD VTVVTENDGLPAVIAHWPAPEGMPTVLLYSHGDVQPTGNLDEWHTEPFVATAKGERLYGR GTADDKGGVAAHLAAIRAFDGKPPVGVTLFVEGEEEIGSASMEVIIAEHKDELAADVIVV ADSVNWEQGVPSVTTTLRGVVDCIVEVSTLDHALHSGQFGGIVPDALTTLCRLIATLHDG TGEVTVDGLQGFAGPELDYPEDRLRAETGILDGVQWVGRGRAVEKMWTKPSVTVIAIDAT PVKDAINILPASARAKLSLRVAPGQDAGEAMEALVKHLESHVEFGAHIKVTRGQLGQPGV VPFTGDKAEVAKEAFRLAWGQEPVEMGTGGAIPLVTDLQHAFPEATVLVTAVTDPESRMH GIDESLHLGDFRRAILTEALMLAGLAE >gi|302034485|gb|GL383266.1| GENE 14 18221 - 19465 913 414 aa, chain + ## HITS:1 COG:AGl1094gl KEGG:ns NR:ns ## COG: AGl1094gl COG0477 # Protein_GI_number: 15890666 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 5 392 2 373 409 99 27.0 2e-20 MPSSSVSYRTLFSLPGGTFVAVSALARLPLAMSQLGTLLLVSSPQVSGRLGPGGLAAGVV ALAIAIGSPFFGALTDRHGQRVVLLAQSLVGGTALIAEGLAAVMGAAWPVVAVMGGLAGF FLPQIGTMARVRWRAMGAANPTMEAGILETSFAWEGAIDEASFALGPAAVGALAVLAGPV PGLIVAGAMLVVLGSWFALDPTSKLVEVHPGRTIRAGAPARSDRGGPGPLFTSGVAATCV GMIFMGMVFGSVQTGTTSLATDAGRPGLAGLFHALLSVGSAAAGLALPRLAHRLDLPARW RLFAAGLALFAAPLLLVDRLGPLVPILIILGMAAAPYMITLFSVAERSASAGRIGTVMTL LAAMNSLGYAFGTTLAGRLADWGGATPAYAVTWGVGVAATLLALPAASRVAPTH >gi|302034485|gb|GL383266.1| GENE 15 19560 - 20510 852 316 aa, chain + ## HITS:1 COG:ML2206 KEGG:ns NR:ns ## COG: ML2206 COG0034 # Protein_GI_number: 15828184 # Func_class: F Nucleotide transport and metabolism # Function: Glutamine phosphoribosylpyrophosphate amidotransferase # Organism: Mycobacterium leprae # 19 313 54 347 556 363 59.0 1e-100 MARADGRLTADLNPQDHGPQDACGVIGIYAPGEEVSKLTYFGMYALQHRGQESAGMAVSD GRHMMVFKDMGLVSQVFDEATLNSLQGHMAVGHTRYSTTGASIWDNAQPTFRSRQGGDGL ALAHNGNLTNTGALEALIAERAPDTEVPHKDRMDSSNDTSLVTALMTTYDGTLEEVAAQV LPHLQGAFSLVFMDDHTLCAARDPQGIRPLVLGRLSSGWVVASETAAIDIVGGTFVREIE PGEMVAIDAAGLRTSRFAAARPKGCVFEYVYLARPDTVIAGRRIHNVRVKVGKILAQEHP ADADLVIPVPESGLAS >gi|302034485|gb|GL383266.1| GENE 16 20587 - 21087 455 166 aa, chain + ## HITS:1 COG:Cgl2530 KEGG:ns NR:ns ## COG: Cgl2530 COG0034 # Protein_GI_number: 19553780 # Func_class: F Nucleotide transport and metabolism # Function: Glutamine phosphoribosylpyrophosphate amidotransferase # Organism: Corynebacterium glutamicum # 2 146 346 497 515 216 69.0 1e-56 MGLVKNSYVGRTFIQPSQTLRNLGIRLKLNPLRDVIEGRRIVVVDDSIVRGNTQRQLVRM LREAGAAEVHVRISSPPVQWPCFYGIDFATRAQLIAPGLDVEDICRSIGADSLGYVSLDG LVRATHVDADNLCRACFDGVYPVPVPVSARAVLADATHTNPNQEQQ >gi|302034485|gb|GL383266.1| GENE 17 21084 - 22151 788 355 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149378138|ref|ZP_01895857.1| Ribosomal protein S7 [Marinobacter algicola DG893] # 7 339 10 337 354 308 48 8e-83 MSNESAYARAGVDIEAGERAVDLMKAHVAATRRPEVLGGLGGFAGFFDASVLGQYRHPVL ATSTDGVGTKVAIAQAMDIHDTIGFDLVGMLVDDLVVVGAEPWFVTDYIACGHVDPDRIA AVVKGIAAACTQAGCSLLGGETAEHPGLLTDDEYDVAGATTGAVEYDDILGPQRVQEGDA LLAVASSGLHSNGYSLVRKVLLADAGWALNRHVDELGRTLGEELLEPTTVYAADLLALIR QIEVHAMSHVTGGGLANNLARVLPDDLVATVDRSTWTPAPIFNLVQQVGNVSQPDIEATL NMGVGMVVVMPDANISAAIDLLAERGLSAWQCGHVSHRDATNELGAVLVSSHPCC >gi|302034485|gb|GL383266.1| GENE 18 22236 - 22490 189 84 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5032 NR:ns ## KEGG: HMPREF0675_5032 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 84 1 84 84 122 100.0 4e-27 MILGGNAAIDEARGSTHMGRGRAKAKQTKVARDLKYRSVNMDLESLERELRGESRQQEDP HDEDGLSDEYADLAEKYAHYGEED >gi|302034485|gb|GL383266.1| GENE 19 22506 - 23462 691 318 aa, chain + ## HITS:1 COG:Rv2854 KEGG:ns NR:ns ## COG: Rv2854 COG2267 # Protein_GI_number: 15609991 # Func_class: I Lipid transport and metabolism # Function: Lysophospholipase # Organism: Mycobacterium tuberculosis H37Rv # 28 318 22 332 346 152 33.0 9e-37 MRWLNDPLLDGFEYARIGLPHAAKAVGDPDGLLTASVVRRGEPRHGRAMLYVHGWSDCFY QAHLAEVVESWGYDFLGLDLRRYGRNLVPGQMAGWVRDLAEYDEEIDAAVSLLRADHDSV TIMGHSTGGLIVPLWVSRHPGWVDGVILNSPWIDLQGSFLTRALAGPVARSVRVAEPTTV LPIPSRDNFGHSIRREFGGEWDVPEVKDPSWAPFVTRAGWLAAILDGHQKVAQGLHIDVP LLVLISARSDLSATWKPSMKTADTVLDVDRLARAAVNLGRHLTLVRVRGGLHDVVLSAPS VRAGVFAEMERWVDAYLA >gi|302034485|gb|GL383266.1| GENE 20 23611 - 24918 1430 435 aa, chain + ## HITS:1 COG:BH3845 KEGG:ns NR:ns ## COG: BH3845 COG1653 # Protein_GI_number: 15616407 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Bacillus halodurans # 1 426 1 431 436 270 36.0 3e-72 MYAKKIAALATASMLVLAGCSSTTTDEDASQGSTTSSSTPKAGGAGGEVGVFTWWADGSE ARGLQALEKMFAKKYPHDRFKNLAVAGGSGSNAKAKLASDLKNGNPPSSFQGHAGAELTD YIDNEQIEPVDGIIKELGGESVFPKTLADRLTVDGHIYSVPVDIHRANVVWANSALLKKA GVTKTPTDVKGWIADMEKVKASGVATPLSIGGTWTQTELFESILAADMGADGYNKLFTPD GTWDSPEAKAAIEDYKKALTFTNTASDGDDWPAATDMVASGKAAYNVMGDWAVAEFDMKG KKYNADYTAFVVPGKEVVYDFLADSFTLPTGTKNPEATKDWLRFVGSADAQSTFNKIKGS IPARTDVKPDGFSTYQQTAMKDFKEVPIVSSIAHGAAVSLAWSSEINTAMSKFYQDKNAD NLASALVAAHDKYGK >gi|302034485|gb|GL383266.1| GENE 21 25047 - 25943 796 298 aa, chain + ## HITS:1 COG:BH3846 KEGG:ns NR:ns ## COG: BH3846 COG1175 # Protein_GI_number: 15616408 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Bacillus halodurans # 10 294 35 326 328 204 40.0 1e-52 MKRVRRWLPSFLLVLPSIILVGVFVYGFIGKTVFASLARVKTKSGRVKAPGGWANYSQLL ADGRYQHAMWNLLVLTVVFVAGTMVFGLLWALLLEKGVSGEGFFRSILLFPMAVSFVAAG VIWRWLLSPAKDGQAAGLNQLFVHMGMSGLQSSWYSSGKFNMAAMAIPAIWQLSGYIMAL FLAGFRGISEDQREAARVDGASEFKLYWNVLFPQLSPIALSALIIVGHMSMKMFDLIYAI AGQSSYTAEVPATLMWTQMFQLNNPTAGAVNATILLVIVAVVVVPYLVYTNRTERQGR >gi|302034485|gb|GL383266.1| GENE 22 25943 - 26869 820 308 aa, chain + ## HITS:1 COG:BH3847 KEGG:ns NR:ns ## COG: BH3847 COG0395 # Protein_GI_number: 15616409 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Bacillus halodurans # 35 308 4 272 273 202 45.0 5e-52 MTSTALPDEVRGDATVPGGTLADAPQRRRRRTAAQQTMSAVRYVLLVIFAVLVLTPAYAL LVTSFKTPSVYDQTTAWKFPRVWSVGGWQAAWGALAPALGRSLVMAVLAAIISAILGSLN GYVFAKWKFPGSHVIFVLFLFGMFIPYQAIMIPLSGMMLDIQQGAPWFAGIPTLVLCHVV YGIPICTLIFRNYYATAVPSEIVEASRVDGAAMISTYTKIVLPVSIPGFVVTLIWQFTSA WNDFLFALFLTNQNNGPVTFGLNALASGQNPNYPQIMAGVLIACLPTVVVYIALGKYFVS GLMSGSVK >gi|302034485|gb|GL383266.1| GENE 23 26933 - 27178 64 81 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTFHFSGERYYQLSYPAIVPTQRPHEHESGDELITASATPMGLEPTTSAVTGRRANQLRY GALTLVSPTTASGSSKNIARM >gi|302034485|gb|GL383266.1| GENE 24 27692 - 27904 95 70 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLAFWADERLPACLPWWHRRRRQPIGIAGVTLVQLRRFELMRTGYIEERMGLRRTPARGL AASTMYPLPT >gi|302034485|gb|GL383266.1| GENE 25 27790 - 28956 231 388 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145223395|ref|YP_001134073.1| NLP/P60 protein [Mycobacterium gilvum PYR-GCK] # 256 381 221 346 348 93 40 3e-18 MGVVRPLRAGVATLATAGLAIGGSQFFAPPAQATNSSVKARVSARTAVNIRAQAGIHGKI VGVLERGQQLNQTGVPVNGWVPVAYRGHTAFIDHHYLSSVAWRPSPSSPSASSSPVGIAQ ATTYVYVRAGHSMQAAKVGVLSPGEKVGVTGRSAQGFSEVVYNGVHRWVGSRYLSPTAAK PSPKPAPAPKPSKTVYTTANLNLRNGASMSAAVYTSVSRGTALATTGRTTSGWTQITHRG RTLWASSKYLTTTTPPTPAPRPAPDPSVSPRGARAAIVNYATAQVGKAYIWGGEGPDGFD CSGLVLKAYQQAGINLPHYSGSQIERGHRISLDQIQPGDLFAASGGGHVGIYVGNGYMVE AANPRAGVRLSPIRSSMYPVRINSNLLN >gi|302034485|gb|GL383266.1| GENE 26 29091 - 29387 74 98 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313836177|gb|EFS73891.1| ## NR: gi|313836177|gb|EFS73891.1| hypothetical protein HMPREF9621_01729 [Propionibacterium acnes HL037PA2] # 1 93 1 100 110 101 64.0 2e-20 MRSDPGIRRPILGPLPQRVSIPTPKHQPVLQSWHELFRLAAAMATPRTITFMASGITPSQ SRLGDPQRRQRTPNNIFEILSHFSACRLAGDEKTLRSK >gi|302034485|gb|GL383266.1| GENE 27 29679 - 31001 1186 440 aa, chain - ## HITS:1 COG:BH0905 KEGG:ns NR:ns ## COG: BH0905 COG1653 # Protein_GI_number: 15613468 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Bacillus halodurans # 10 434 3 445 445 101 24.0 3e-21 MANLHSFSRRGLLLGGGVAMTTMALAACGESKSASSSSTSSGASDAKVSLTFWGWAPGYK EAVELWNKKNPNTQVTWIATEASRKIYPKMLTAVKANNAPDLAQVGYEALPSFVIQDAVQ DIKEWAGDVDKNFTAAGAKSVNLSGAVYGIPVDTAPMAMIYNKALLDSLKIKAPKTWDEF ASAARAVKKADPKASLTYFSSDPNFLAGLVRQAGGRWYDVTDSTVKVIMTQDAASRKVAD FWQKLINEGSIPVHEGYTPQVYKQMNEDTLISELYGIWDTALIAQNVPKGKGKWAVAPLP EWPDRPGGADMGGSATVVLKGSKNAEAAARFATWMSTDPQAVSILISKGGLWPASTTGLA NKALQKPDAFYSNDKVFVPFIDVAKNLKYDWVWGPTQVQAGQDMENNLVKVSKSYPITKA LADTQESTLAKLKKQGIKVG >gi|302034485|gb|GL383266.1| GENE 28 31012 - 31938 882 308 aa, chain - ## HITS:1 COG:AGl624 KEGG:ns NR:ns ## COG: AGl624 COG0395 # Protein_GI_number: 15890429 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 84 308 131 349 349 152 37.0 8e-37 MSEQNLMESTDHGTTGVVPPVKRNRGKGGKPQFGLTGASMLVVMIIAALYFLAPLWWFLV SATKSNGGLYSGNPFWFHDFSLAENFTDIVHRDGGIYFRWLRNSIFYSLVAGVGAGLISA MAGYALAKFRFRGRDAVFNCVLAATLLPIMLLTVPLYLMFSKVGLVDTIWAMILPSLINP FGIYLCRVYSATVPTEVLEAARLDGTSEAGIFFKIVLRIISPALATVFLIQFVSTWANFL LPTMMLTTPEKQPLAVGLVTWQATIQTGNPAPTNILIFGAFLSVLPLVALFLLLQRYWKT GLTTGGIK >gi|302034485|gb|GL383266.1| GENE 29 31931 - 32866 699 311 aa, chain - ## HITS:1 COG:BH2725 KEGG:ns NR:ns ## COG: BH2725 COG1175 # Protein_GI_number: 15615288 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Bacillus halodurans # 22 305 12 289 290 102 26.0 1e-21 MKVVTTSGHRRHSSTQPKLAPWLFLFPALLLFVFIFVLPIAYTIMQSFLKPGQKKLLYAP SGHTAPQFAGISQYTAAFQDSHFLLSIGRVLLIGVVQVPLMLLFSVCLALLLDARRVKAR QGFQLAYFLPYAVPGAISALMWTFLLQPQLSPFTSLFQKMGLNLNLLAPSVVPISVGNMI TWGFAGYNMVVIYSALKAPPNEILEAAHVDGASSWRTAWQIKVPMVRPAVIMTAVFSIIG TIQLYNEPAILRNSAPRIDPDFSPIMAVYNLVTTGDYFGAAARSVILAVITLVASFGFLK LQSRRGGAFDE >gi|302034485|gb|GL383266.1| GENE 30 32863 - 34362 1111 499 aa, chain - ## HITS:1 COG:no KEGG:PPA1958 NR:ns ## KEGG: PPA1958 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 499 52 550 550 983 99.0 0 MYDRVTASVMVLVDDHEIAANCWRVMEVAAPLVRYPESGGVYEIDVPGLVPDRLDPLGRF GARFLPDQWQSLVVELTTPLDPGSHTLDIRFVDDDGLIADATQRLEVVSVTGAVASFHHS EWIHVDALQAWSDVEAFDERHWDLIDKAVELAASAGVDTLFTPVLTPPIDVDPTSPPLAT QLVVVHRQGDRWSLDFDRLDRWSRIARRHGITHLEFSHLFCQGEVDRPADVYDANGNHLF GSHLSTEGYRDFLAVLLPALDQWSRRHGWSDALYWHVSDEPRANQYTSYRKAVDMVRRTV PGATVIDAVDDPRFATVVDVPVTIYGHLLECEAAGLDGMWVYTSCASTFWEPNRHLGMPL TRLRALGLLLWWHHTPGLLHWALNFWFDQFSRYLVDPNADTSADLAFPSGDSSVIYPRVD GSLVPSLRLKVLAQLHEDVRLLRRVEDAVGRPTIVDLIEHLAPGSTADLDHRYPLEPDFY RSLTANLLRLLKDIDGATV >gi|302034485|gb|GL383266.1| GENE 31 34656 - 35789 599 377 aa, chain + ## HITS:1 COG:BS_xylR KEGG:ns NR:ns ## COG: BS_xylR COG1940 # Protein_GI_number: 16078822 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Bacillus subtilis # 47 251 1 207 350 60 22.0 4e-09 MGQGRSDGAEQLGGRSLTDLRDHNQAAVLDCLVTATQPVTIRRLQELTGLTRPTVSAAMN SLLEQGDALEQESMHAGGRGGRRSRMFTLNATKRVQAGAAIRLQDVELGLADWHGEMLIS TSRPLRGGSPGALLDEALDDLLQELGLDSVDTMVIGALGSVGPDGRLRHNESLPEISDPD HFTALHDGRVGNVMIENDAVLAALAEQHVRGLADTESMVSLLIDASVGAGIILDGRAIRG SAGYAGEMSYLPGAGWATAHLDLVDAAARHDVSAEALFELAGSPHAPVWAEQAVDAFADA IVPGVAALLAALDPGLLVIGGHARPAHVRIARRLRASLRDDLPHLPCIEASRAGAHAVVQ GAVELALAQPEASTRQV >gi|302034485|gb|GL383266.1| GENE 32 35679 - 35999 70 106 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSAPNSARVTAVRNLIGSPTVRRWDHQVRTSSLADPHDVPTMSSAPMACDSQRRHARVVK ISFGTPSDPRSDLSSRGLRLCQRKLHSSLDHSMSTRSGRLNAWQMR >gi|302034485|gb|GL383266.1| GENE 33 35953 - 37809 1413 618 aa, chain + ## HITS:1 COG:no KEGG:PPA1955 NR:ns ## KEGG: PPA1955 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 618 1 618 618 1099 99.0 0 MRFRTAVTLALFGALIGGAPGAVAAPTASATTTTTYVDCSAPTPGRGTETSPLNSLTQLK SAFGPGRKVLLRRGSTCVGTVVINASGRAGADTLLGAYGAGKAPVIDAKASVRNRRSAIE VDNKSHFVIQDLTVRNGYFNDISVEAHNGEHITGVTIQRVTAQQNVWTGGANSVTKNMWV MGVGGISVMPCSAKAQISQVTINQVETSHTHYAGVQLGYHQLYPWSDFEAGVARDGYSVP TCFAADAKPYPHVTPRDGIKNAVIANSSLHDNDAMGIGVFGATDVVVRKNDLYRNGSGRK PNPTPGSNTMNGAGAWWDTTRNVTAEWNNAWGNREGWTGNDGTGLDADRNTVNSVIQNNY LHDNANYGVSVISAQNKASATIRNNVIAGNGRAFGSAPEVMVSSYDDGSGIPGQVSGLWI YGNTIFRASNKGDGAGIRLQAPFTTDAKVGIVNNIIRVNGAPYSFDANGNQAVGRPGNVV THNLTHPNSNWPGDINGLPGLADETARAHGWPTGGLYRLGPTSPAIGRALPLSNDVLPGN TAPMEGLVDFWGMAVPTDGSPFAIGADIHRTIVPPTTAPSSLPSIHAGTVPGNPAVAITA PSGKKNVVGLRTLPKTGV >gi|302034485|gb|GL383266.1| GENE 34 37925 - 38704 731 259 aa, chain + ## HITS:1 COG:Cgl2203 KEGG:ns NR:ns ## COG: Cgl2203 COG0647 # Protein_GI_number: 19553453 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar phosphatases of the HAD superfamily # Organism: Corynebacterium glutamicum # 10 255 7 252 275 313 63.0 2e-85 MRDPADIECWLTDMDGVLVHENHEVPGASDLINRWVDTSKRFLVLTNNSIFTPRDLAARM QASGLTVPEDNIWTSALATAHFLADQQPGARLYVIGEAGLTTALHEAGFILTDIDPDYVV LGETRTYSFEAITRAVRFIVDGARFICTNPDATGPSKEGPLPATGAVAAMIEAASKHKPY IVGKPNPMMFRSALNRIEAHSETTAMIGDRMDTDMVAGMEAGLLTVLVLSGITKREEVEQ YPYRPNIILDSVADLNELI >gi|302034485|gb|GL383266.1| GENE 35 38783 - 40285 871 500 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5014 NR:ns ## KEGG: HMPREF0675_5014 # Name: not_defined # Def: phospholipase, patatin family # Organism: P.acnes_SK137 # Pathway: not_defined # 1 500 1 500 500 982 100.0 0 MELPSWLGIPTLAFGLGSRTPQQGLVLAGGGSRASFQMGALRHLYDVVGITPTSMVATSA GSIVACTLAQWTDPAKQSAALRQLEAMWLEMTDQSDMFTPRAWFSRLLEIGPEWMSLLNR EAAKTKSQRPWLSLPFHRGPEQTKVPDPAEPVAGRDDDRLTGQARTLEIATRDDPITGGS WTPGVILQLLSALSRLSRDGGDISTIVRGAETSASTYRAGPILAKLLDRGFFKSELLATS GMSVRIATVALESGELRYMTESGVLVDRDNNPIGSSTFDVSRGVLASCSIPGVFRPVDLD GEHYVDGGLRENVPAEMAIGHLGVTNPYIITCSPQGTARESDFGSRNMLDLVMRTVSILT DETERDEVAYALNAGAVVIGPEISVHDSMTVDPGLLRINRDYGWMCSAEKHITPGPDEHE LIKDAVRTRVRGWQLEQAWLKEEASREDMDEMQHLKDHLRDIAARLPRDLAPDGVETWGR VLEGHGHPQAPEDVVIPWQV >gi|302034485|gb|GL383266.1| GENE 36 40318 - 41283 812 321 aa, chain - ## HITS:1 COG:CAC3552 KEGG:ns NR:ns ## COG: CAC3552 COG0039 # Protein_GI_number: 15896788 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Clostridium acetobutylicum # 6 313 6 312 320 229 40.0 4e-60 MPIKPHKLGIIGVGRVGDAVLSDAMMSGLFGEICVIDVNEKLAAGQALDQHHATALPNVT NVAVYAGDYDDLSNADVIIMTAGPSIDASNGPATGAARRELAATNGKIIRSTMTQITGRN HDAAIIICSNPLDALVHIASTEFDHPQGLVLGTGTILDSARMCRVVADHLGVDPDYVRGY MIGEHGPSGFPMFTGVNVGGVGFDGLAKLFDADPMDRDELTTRINDAGTAVFNLKGWTSA GIGQSAITIARSILLNEHAVYPVCTTLHGQYGHDGDVSMGVPCVIGATGVERILEVPLDD WEQEHLASTIKAIQETVEAAS >gi|302034485|gb|GL383266.1| GENE 37 41131 - 41457 95 108 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5013 NR:ns ## KEGG: HMPREF0675_5013 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 46 108 1 63 63 134 100.0 1e-30 MLIEGLTGGQLLIDVDDANLTEESTHHGVGQHCIPDSADPDNPELMWLDGHRNLLQSSRS TFAVHAYISIIHQAGFNFVTPLRHSGRAVRCAWPSLGRWLCRHCVPDR >gi|302034485|gb|GL383266.1| GENE 38 41458 - 42441 561 327 aa, chain + ## HITS:1 COG:sll1263 KEGG:ns NR:ns ## COG: sll1263 COG0053 # Protein_GI_number: 16330736 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted Co/Zn/Cd cation transporters # Organism: Synechocystis # 39 326 9 296 310 271 50.0 1e-72 MTVLFGEYRWGWDNARVTTIPDIPAVTSRHRPPEDLSRFAWLSIAAAIATILLKTLAWHI TGSVGLLSDAAESLVNLVAAIIALVALKVSIRPPDMNHQFGHSKAEYFSAGAEGMMIFIA AAVIIYSAVERFLYPRPIADAGVGLLVSVLASVINGAVAWVLLRNGRKRRSMTLIADGKH LLTDVWTSLGVLVGVGLVWLTGWQRLDPIVAFAVGINILVTGAKLVRQSGTALLDVSLPE EDNAAIRDFLAAHSNDHLTFHAVRTREAGYRQFLEFHMLVPGSWTVKQGHDVMEDLIDEI LEEWPEMRVSGHLEPIEDPRSYEDIDV >gi|302034485|gb|GL383266.1| GENE 39 42527 - 42985 385 152 aa, chain + ## HITS:1 COG:TM0404 KEGG:ns NR:ns ## COG: TM0404 COG2131 # Protein_GI_number: 15643170 # Func_class: F Nucleotide transport and metabolism # Function: Deoxycytidylate deaminase # Organism: Thermotoga maritima # 5 137 43 173 201 100 40.0 9e-22 MAEVNGKVVTVPDWDQYFLGIAEAVSARAKCTRRRVGALLVHEHRIIATGYNGAAPGRPD CLEGACPRGRLDYGEVPAFSDYDVPGSPGFCIAIHAEMNALLFATRDTAGSTAYVTDKPC SGCRKALAAAGVVRAVWPDGELGEDDLVNWQL >gi|302034485|gb|GL383266.1| GENE 40 43069 - 43494 370 141 aa, chain - ## HITS:1 COG:ZycgC_1 KEGG:ns NR:ns ## COG: ZycgC_1 COG3412 # Protein_GI_number: 15801428 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 EDL933 # 6 138 3 136 149 87 48.0 6e-18 MSDQGVGIVIVSHSCPLGRAAADLASQMLPGPEIPPIEVAAGLDDTTLGTDATAVSAAIE KVGNCDGILVLVDIGSAILSAEMALDLLDADIASKVKISTAPLVEGAVVAAVMTSTGAEL EVVAAEAEKALDPKVSQLSND >gi|302034485|gb|GL383266.1| GENE 41 43487 - 44143 473 218 aa, chain - ## HITS:1 COG:ycgS KEGG:ns NR:ns ## COG: ycgS COG2376 # Protein_GI_number: 16129162 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Escherichia coli K12 # 8 209 3 205 210 149 44.0 3e-36 MGMLMSEISAATVSEWLKNYSAVISEHANELTDLDRQIGDADHGSNMARGMTAVAALDPE PFASAAGLLKKAGMTLVSTVGGASGPLYGTFFLRLSTVIKTDGEPTAQLLADALDAGLAG IVARGKAEVGDKTLVDALSPAVDAAKQVAADDGSAAEALAKAAEAANEGRDATIEMVARR GRASYLGERSKGHQDPGATSMALLVASAAHCLSGANHE >gi|302034485|gb|GL383266.1| GENE 42 44131 - 45132 823 333 aa, chain - ## HITS:1 COG:mll5289 KEGG:ns NR:ns ## COG: mll5289 COG2376 # Protein_GI_number: 13474411 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Mesorhizobium loti # 1 332 1 327 328 335 56.0 9e-92 MKKLINAVEDVVVDSLRGVAAAHPHCLKVDLDHRIVLRASCPVNGKVGLVSGGGSGHEPL HSGYVGRGMLDAACCGEVFTSPVPDQITEATKAVDGGAGVLHIVKNYTGDVMNFDMAAEM ASMEAGTRVESVVIADDVAVQDSLYTAGRRGVGLTVLAEKILGAAAEDKRDLDALLELAQ RINDGGRSFGVALTSCTVPAAGKPTFDLDENKIEMGVGIHGEPGRETATLGTAAEVAAQI VEPILADRDFTTTPVIAMLNGMGGTPLIEQYLVWGEIAKILAGKGVKVARTLVGNHITSL EMAGCSLTLLSADDDLLTLWDAPVETPGLRWGC >gi|302034485|gb|GL383266.1| GENE 43 45221 - 46498 1360 425 aa, chain - ## HITS:1 COG:CAC0458 KEGG:ns NR:ns ## COG: CAC0458 COG0477 # Protein_GI_number: 15893749 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Clostridium acetobutylicum # 2 389 9 394 409 163 29.0 6e-40 MFASLSIPNYRIYFSGTLLTNMGQWMARTAQSWLVLVILTHGNAAVLGWVMAVNFAPILL VTPWAGALADRMSKRRIMVTAQIVLAIDAAILSTLVLTGAVRLWMVFVIAAMDGLAGAFY SPATQAFVSELVPLKNLPNAVSLNSASFNGARLLGPGVGGLLIAAVGVGWVMAINVLCFI GFITTLLFIRADRLYVSPPSAEKARVRDGVRYVKRRPDLVILLAIGFMMGTFGFNFNISD AVMATQAFGKGSGEYGLLGSLMGIGSMVAALGAARRRPRLRWVELALLVYSVSMGLSALA PNYGIFAVLKMFVGWGAISTLITANAMVQTSVTPHMRGRVMSLWATLVMGGTPLVSPVVG WIGNAIGPRATVAWGAISLGITFVVITAVIMHNDRIRVVFDPSKRAPWLRQVRGKVTIDY VQQTK >gi|302034485|gb|GL383266.1| GENE 44 46703 - 47590 780 295 aa, chain + ## HITS:1 COG:Cgl0443 KEGG:ns NR:ns ## COG: Cgl0443 COG1575 # Protein_GI_number: 19551693 # Func_class: H Coenzyme transport and metabolism # Function: 1,4-dihydroxy-2-naphthoate octaprenyltransferase # Organism: Corynebacterium glutamicum # 3 283 12 289 298 230 49.0 2e-60 MATAAEWLEGARPRTLPTAIAPVVAGTAIAIADGGARWELATLCLVVALGLVVGVNFAND YSDGIRGSDGEDRVGPLRLVGSGVAEPSHVEAAAFACFGVSAVAGLIITIMTGHWWFIIV GLACILAAWFYTGGSHPYGYAGLGETFVFIFFGLVAVGGTVYVQADHVGTAGWVTACVIG AMACAVLVANNLRDIDGDRVSGKHTVATKLGHQGTRILYLVLVALACVGVIVVAALSTWW VLLGLLMVILLVSPVKALATKATGMALVPVLKNTGLAELLCAVGFLVGAMLDRPL >gi|302034485|gb|GL383266.1| GENE 45 47779 - 48027 225 82 aa, chain + ## HITS:1 COG:no KEGG:PPA2362 NR:ns ## KEGG: PPA2362 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 82 80 161 161 86 48.0 3e-16 MYADSNFHGLIAKQTKVGYYNFNKNQNDSLSSVKNQTPYGAAFWYDVNQKGHCWDYKPWT NDSSFWWKDHDEASSYGLGHRC >gi|302034485|gb|GL383266.1| GENE 46 48054 - 48719 280 221 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 5 221 5 222 223 112 29 7e-24 MAHPLKASDVHVSYVKGDEVLKGVDLVLHTGELILVRGVSGSGKTTLLNVLSGLLSPLRG TVCINGVDITKISESRRDAIRLHEMGMVFQHHGLVPDFTSRENIELVLRAREIKNSAAIA MDALKEVGVAELADRRPAEMSGGQAQRVGIARAIAGGHRIVLADEPTGQLDRANTDMIFK VLRHIVTDGADRAVLLSSHDPRACDYVDRVLDMEDGVLEEV >gi|302034485|gb|GL383266.1| GENE 47 48721 - 51006 1134 761 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_5003 NR:ns ## KEGG: HMPREF0675_5003 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 761 1 761 761 1380 99.0 0 MWIVHVTRLVVSNWRTWLRVIPLALVVVALTVSSGITNARQLSDEQKNIASYGSTSGLFS LQEDVPPGTPVPIPRNNTLQASAPFPQLYSNINLVQYDDVAYQEMPMAGSATQGRYRLTS GRWPAKAGEVLATSTLGADDGSRLSAKAGDLHLTVTGHVEAVYDRAATLVLAAPGTWQSW RISRDDAGRAGIRGNGQIGFTSQEPGDVCSLLAETLKLAGDCDTTQTRSASEAHGLTPKA FVDQNVAWLVFGLLGAVVSGAALTALLRRIASPLLAIGVRRRSVSAMSKTVALLVAETVS LMSVALGQAVVAAARWYMAPRASAPLGPWRFPTVPLVMALVIGVLPAAMVNMVPSRRKTV KRRGINMNTARRLGWAALVLGCAVCLWGLLGADATFTAVAVVAGMCAVAGGLGAPFVLSR LVRTHRPVGRALAAHRALSSRGGWHCVFAGVAAGLVTATATGLLIVSALFSQANGQTSTG MPPGMALLHVSMEGVPALESAQVKQFSDALEGAKNITVHQVDDANISGSWWYFSKVDDVA VVTKLDDAQRDVLVSGGYLTNDPSRADPAHTVGLTDDLSWVKRISVRPKAGIPRGAGSAI LFTGLTPDQDRLTNEWAQAHGLGEFYVMAPRILGDVPLPTITIVATVTFIVLSAIMAGLL AKEERAANSDLVTSLKRIGLGRRWVDQVILVEVATTMLAALICGVISSVVAVWLTGRILS GALDLLGAAWWVFGALAAGMFGGSLLGAAIHRRYHFDMRAT >gi|302034485|gb|GL383266.1| GENE 48 51109 - 52635 249 508 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 257 479 131 354 398 100 33 3e-20 MSAKMRQILSTRYFSKLLELPQSWFDEELTGSITSKLTRSITNVTDFAKAFSNNFFTLLL TTFAVLIISAIYYWPLALLLAIVFPIYVWLTALTSRNWQTHQDVINHHIDTAGGRFQEGV SQIRVVKSYVTEASEQKQFNNHYDATVDATRQQSNHWHLMDTVRRVVLNVIFFGIYAIIF VRTAKGYFGVGDMILLIQLMTMARQPVQMMSYIIDVAQRAVAGSKDYFSVMETRPAHVPQ TATTTIREPEPGVPMISFNDTVFSYDGTNRVIDHATFDVSPGEKVALVGESGGGKSTLVN LLLGLYPVTEGAIMVAGNDISQVTPDALRRRIGVVFQDPALFSGSIRKNIAYGTEATDAQ IRDAAHRAYADRFIKRFSQQYDTLVGERGIKLSGGQKQRISIARALLKDAPILVLDEATS ALDTKSERWVQAGLESLMADRTSLIIAHRLSTISSVDRIVTLDAGRVDEIGTPAELAASG GIYAELLALQASSSKADRKRLERFGIKL >gi|302034485|gb|GL383266.1| GENE 49 52632 - 52895 153 87 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_5001 NR:ns ## KEGG: HMPREF0675_5001 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 87 1 87 87 120 100.0 2e-26 MRSLTRILRFTSQLWKFYLGVVISAVIVAITQLAVPFVIARATDLAVAGVRGNDHHIRDI MLLAVVTSSSTSSTPCSPTSTDGWATS >gi|302034485|gb|GL383266.1| GENE 50 53039 - 54787 1194 582 aa, chain - ## HITS:1 COG:Cgl2866 KEGG:ns NR:ns ## COG: Cgl2866 COG2251 # Protein_GI_number: 19554116 # Func_class: R General function prediction only # Function: Predicted nuclease (RecB family) # Organism: Corynebacterium glutamicum # 251 578 160 460 471 90 29.0 8e-18 MKGPSSPILLDAWAARSCPVKTQNAYDPTLSEPVGDPRDDELFAGAEAHLTVICDALAAV TDAVDLRSVTLSVAGRRVATRRAIEAGAPVIVCPELPSSPQEHRTGSPNALVLAGKRADG GPGYLPVIVKYYLVLESHHTLAEFTWVSPLNDPDPRHARMSLDQTFRAGRERALIQAAHH WRLLEGLGLVATPDECPSHRRLVGLVGHDEIGILDDNLAVSWLDLDHKFIRTFSRSSASG WRRRSVLDRYDHEHTFRVSVAEHAIAGGEPMVAPIVVRECESCQWWAICEPRLDDADLSL RISKAPLDVREISTLRRLGVSTVDDLADADLDELLPVYLPEVQHRPRPEQRLRAAARRAR LIRQGVLLERNDEGPIEVASSRLELDFDIETSPDGRVYLWGFEVSDPERLLDSTTGDVPY YVAFSEFADMGDDDENALAARAIAWLDEILSAHPETIVVHYSDYEIVHLRHFGHVCQDVE TRQAVRRLLDSGRFVDLFTTIKAHFFGVNGIGLKVVANAGAGFSWRDPDPGGLNSQTWWD LAVHDPDPQVRESSRTRVMEYNEDDVKATLAVRRWLAERPSE >gi|302034485|gb|GL383266.1| GENE 51 54789 - 55457 362 222 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163754278|ref|ZP_02161401.1| 30S ribosomal protein S15 [Kordia algicida OT-1] # 1 214 1 221 221 144 37 2e-33 MFDGVAKRYDLMNQIMTLGAIDTWRDLVVAAVEPEPGQTILDLAAGTGTSSATFAARGAQ VYPTDISTGMLAVGKQRQPHLHFVAGDATCLPYADNSFDAVTISYGLRNVEDPQKALREM LRVTKPGGRVVICEFSYPTWAPFRHVYTKYLLAAIPAMAKLASSNRDAYDYLAESILAWP DQPHLADMMAEAGWQAIAWRNVCGGVVALHRGWKGSDEKEMA >gi|302034485|gb|GL383266.1| GENE 52 55667 - 56311 215 214 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 8 194 5 194 311 87 31 2e-16 MASRSTVLIAKDISKSYGDRIIIDHLSLTVHEGEAVALTGRNGAGKSTVLRMLVGADRPS SGTIEVLGKKVSETNPEFRRNVATVIDDLDFFPDLSVVEHLDLLARAHGLVDADALVDEV LEEVQLVPQSGQLPGTLSSGQRRRLGLATALVRSRKLLVLDEPEARLDVEGVAWLGKRLR EEMNHGLAIVMASHEPALVETLGARTVELGGPRG >gi|302034485|gb|GL383266.1| GENE 53 56308 - 58044 1410 578 aa, chain + ## HITS:1 COG:no KEGG:PPA1941 NR:ns ## KEGG: PPA1941 # Name: not_defined # Def: ABC transporter permease # Organism: P.acnes # Pathway: not_defined # 1 578 1 578 578 910 99.0 0 MSRRNSKHSKPRPKASPSEPQNARAEAAVVPDPELVIAHRPDEFFGGQADERQLSLLMGD WRKGRTTRNIWQAIGDAYVLVFSLVVVLAMVISLIVQAQGQASGCTSTGCQTARGLLAWA ALSGVLAFALAAARVFGPVLASAAEGFWLMDAPIDRAKFLAKRLRAAVLVSVIAGAVLGA LVAALTGAAGKAVVAWTLASALGAAGVVSFAGAEQGTERTWPVKAVEAVAGLAGLAVLLG VISTASGWYAVPMSSDTNLTSAWAVAGAGAVLLVVTFVLARLRLNRIRRARLMAGGSLAS GMQGAAFALDFALIRDILQEREAIERGQVRPTRGRGEGLRALVWRDVQRVMRSPKPLLTL IVTAVVPYAVSALGFGALTVPVSALVLVAALVPFFTSLRVLTRSKGLVRCLPFTTSQVIS AASVVPAVVAALWAIAVIPAFHGVGSAVSRPWEQAVMYGLVTAAGGLAGAIRWVSAKPAD YSSPMVATQAGAMPPGLMFNLIRGLDMVALITIPLVLGWSPWVSVFIAVVVFGFLRMGGM NQQDLAEMREESQRQLAEARQDTRGGKAEKKVIERKRR >gi|302034485|gb|GL383266.1| GENE 54 58110 - 59396 579 428 aa, chain - ## HITS:1 COG:lin1784 KEGG:ns NR:ns ## COG: lin1784 COG1169 # Protein_GI_number: 16800852 # Func_class: H Coenzyme transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Isochorismate synthase # Organism: Listeria innocua # 95 386 103 420 462 90 25.0 6e-18 MRRCCPCGHLGYPATVIVDPGSARLCARTVSISDPGPLENYMTPNDSVCFLHRNYGMVGL GEVTRFETDSPAAADVWWEALCDDLEHETEMPGAEATGPVAFGSFTFDPDRSSSRSVMIL PKTIIGRWPGYSWLTQLSWDSITDDSPHQQSVPRPPGAVTVRDGVVSERSWRQVARLVQD IMSPGELDQIVLMRDVEAKAASSIDPRWIVETLRRQFPNAYTYLVEGSVGTTSKLTVGVS KSLITSRVLTHSPATDANHQTLLTALQGRGPLAAYHDEIVGRTCARLEQFCDTVHVPDCP GCVYNDASTYLVTDVTGINSPDQGSCLALVQALCPPAFVTGLPPHCALSVLAEVEHVDRG RVSGPTGWVDSLGNGQWVTDCRGGQIDATDPSLVHIFSGHPVGHDDDADVLSAEAEHRID VLRDLFLT >gi|302034485|gb|GL383266.1| GENE 55 59473 - 59958 383 161 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4995 NR:ns ## KEGG: HMPREF0675_4995 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 161 1 161 161 277 99.0 1e-73 MFVQIAASLAAASSIALGIPGAATPIDESQLPVGPQVSVTDFAQHTGPFAASSPLTITVK PGAPCVRADGYQESMVTRVLDDKGHQVWTGTFDESKLIGGTGLGTATFHVGSPAAAFNFH GSERTTYRTLSYCAYPHYVNGTRERLSQVSVKTFMVDPALN >gi|302034485|gb|GL383266.1| GENE 56 59882 - 60037 57 51 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGVAAPGMPSAMDDAAARLAAIWTNMTISRYVVRMGIDENHIDFQLKYSTA >gi|302034485|gb|GL383266.1| GENE 57 60189 - 61451 1025 420 aa, chain + ## HITS:1 COG:Cgl0465 KEGG:ns NR:ns ## COG: Cgl0465 COG0644 # Protein_GI_number: 19551715 # Func_class: C Energy production and conversion # Function: Dehydrogenases (flavoproteins) # Organism: Corynebacterium glutamicum # 8 408 9 398 424 194 34.0 2e-49 MTSQMESDVVVVGAGPGGSATAAHLARRGLHVTLLEKVTFPRDKVCGDGLTPRAVKQLIR LGIDVSEEAGWKHTEGLRIHGGRIAPFVLPWPELADYPNFGMVCRRTVLDERLARHAESQ GVTLVEGANVTDPILDPSGRICGVRTSDGTEYSAPVVVAADGNSSRLGLAMGLHKRDDRP MGVAVRAYYRSALSDSRNLESWLELWDGAPQKSDLLPGYGWAFPEGDGTVNIGLGMLDSS AAFGRTDYRSLMKRWLSHLPAEWTLDEEHREGPIRGAALPMAFNRQPHYRDGLLLVGDAG GMVNPFNGEGIDYAMEAGEMAADAIAEAHYRGHRTPAAEKALQGYPRALQRHFGGYYRLG TIFVRLIGDPRVMKMCTTYGLPRRRLMKFVNKLLANLTDARSGDLDDRIINTLTRIVPSL >gi|302034485|gb|GL383266.1| GENE 58 61548 - 61931 231 127 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|154175415|ref|YP_001407462.1| NADH dehydrogenase subunit A [Campylobacter curvus 525.92] # 18 126 17 125 129 93 41 3e-18 MVVTKGGEMNGYAPLVGMVILGAVFVLATITVNVLLAVKRPNRAKHEIYECGIEPTPQPA GGGKFPVKFFVVAMLYIVFDIDIMFLYPWAVDFNHLGVFALVEMVLFVAMVFIPYLYIRR RGGLDWT >gi|302034485|gb|GL383266.1| GENE 59 62086 - 62652 423 188 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|154175216|ref|YP_001407461.1| NADH dehydrogenase subunit B [Campylobacter curvus 525.92] # 2 155 3 155 170 167 50 2e-40 MREMAEYDADVPAGIVMTSMEAIVGWLRKTSFWPLTMGLACCAIEMISYGGPRADAARWG HEVFRASPRQADLMIVSGRVSQKMAPVVRQLYDQMPEPKWVISMGACASSGGIFNNYAVV QGCDHIVPVDVYLPGCPPSPDMLIDAVFKIREQIQHWPLMGHMSEVEAAKEKKALDAKTT LEQKGLMR >gi|302034485|gb|GL383266.1| GENE 60 62649 - 63473 543 274 aa, chain + ## HITS:1 COG:Rv3147 KEGG:ns NR:ns ## COG: Rv3147 COG0852 # Protein_GI_number: 15610283 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase 27 kD subunit # Organism: Mycobacterium tuberculosis H37Rv # 30 274 2 236 236 241 52.0 2e-63 MSDKPTPRGAAGGSDSGDRIPDGRNFLDPSHPDQVHTPAKGREWTDRRIDTRKGMWGATS GPGDTSGYGGIVRTVEISGNSERLYGGWFDEVADRMAELVPDFSDGLTVVDRGEITFFVR PEKLLELVKVLRDDDALRFESCTSLTCVHYPHMAGREMHVVYNLLSMTHNRRIRLEVALA DPGQEDVARTGRSDVDSLPHVPSVVSVYPHADWQEREAWDMFGVIFDGHPALTRILMPDD WVGHPQRKDYPLGGIPIEYKGAVVPPPDQRRSYN >gi|302034485|gb|GL383266.1| GENE 61 63473 - 64774 1139 433 aa, chain + ## HITS:1 COG:Rv3148 KEGG:ns NR:ns ## COG: Rv3148 COG0649 # Protein_GI_number: 15610284 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase 49 kD subunit 7 # Organism: Mycobacterium tuberculosis H37Rv # 8 433 17 440 440 559 60.0 1e-159 MSENHEYLSQGGDWAQIVDEAAERGDETVVVNFGPSHPSTHGVMRLIIELDGESVSDLRV GIGFLHTGIEKNMEFRTWTQGVTFMTRCNYVANFFNELVYCLAVEKLLGITDDVPERARV LRVMITELNRISSHLIAVGTGGLELGASSVAEVGLREREIILEFNQAVTGLRMNNAWIRP GGVATDLPETGLDQLRDLIKRMEKYLPEIGQFCNENPIFKARTQGIGYADLSTCMALGVT GPALRATGLPWDLRKTQPYCDYDTYDFDVATWDTCDCYGRFRIRLEEMDQSVRILKQCLK RLEDTQGDRHMVEDPHIAWPAELALGPDGQGNSNEHIRHIMGESMEALIHHFKIVTEGFR VPAGQVYQAIEGAGGELGCHLVSDGGVRPYRSHLRDPGFVNVQSLPAMCEGGMLSDVVPS LASLDPVMGGVDR >gi|302034485|gb|GL383266.1| GENE 62 64771 - 65556 760 261 aa, chain + ## HITS:1 COG:MT3237 KEGG:ns NR:ns ## COG: MT3237 COG1905 # Protein_GI_number: 15842725 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase 24 kD subunit # Organism: Mycobacterium tuberculosis CDC1551 # 46 244 46 245 252 209 49.0 4e-54 MSDREPVNLGYPYVESFHSDFSGTGGVDQTDRSTNIDEHTIEEMHQIASRYPDSRSALLP ILHLVQSVDGRISPVGIETAAEVLGITTAQVSGVATFYTMYKKHPAGQHHIGVCTTALCA VMGGEEVLARVEKKLGIKEGQTTPDGKFSLERVECNAACDFAPIMMVNWEYMDNMTPIRA EEILDSLARDEEVHSTRGAKITSWREAERVLAGFPDGRADEGPSAGEASLQGVRLAKQSG WKAPDPNNLPAPAEPVEEEKK >gi|302034485|gb|GL383266.1| GENE 63 65553 - 66887 1120 444 aa, chain + ## HITS:1 COG:MT3238 KEGG:ns NR:ns ## COG: MT3238 COG1894 # Protein_GI_number: 15842726 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit # Organism: Mycobacterium tuberculosis CDC1551 # 4 416 7 426 445 601 66.0 1e-171 MTDPLTPVLSANWDEERSWKLLNYERQGGYTGLRKALTMPPDDVVSLVKDANLRGRGGAG FPTGMKWSFVPKDNPNPTYLVVNGDESEPGTCKDMPLMMASPHTLVEGVIIASYAIKAKM AFIYIRGEVLHVVRRVQQAVREAYSAGYIGKNILGSGYDLDVVVHAGAGAYICGEETALL DSLEGRRGQPRLRPPFPAVAGLYASPTVINNVESISTVPSILRNGKEWFKSMGTEKSDGF TIYSLSGHLAHPGQYEAPMGTTLRQLLDISGGMRQGHELKFFTPGGSSTPILTKDDIDLP LDYEGMAGAKTMLGTKALQCFDETTSVVRVTLRWLEFYKHESCGKCTPCREGTWWVVQML RRIEAGEGQEGDVDKLMDIADNIGGRSFCALADGAVGCLRGAIGHFRDEFEAGCRGIPAW QYLPYERSSIFNDADRRVLEGAGA >gi|302034485|gb|GL383266.1| GENE 64 66884 - 69322 1645 812 aa, chain + ## HITS:1 COG:Rv3151 KEGG:ns NR:ns ## COG: Rv3151 COG1034 # Protein_GI_number: 15610287 # Func_class: C Energy production and conversion # Function: NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) # Organism: Mycobacterium tuberculosis H37Rv # 8 800 15 804 806 717 51.0 0 MSENKPVELVTCTIDGQQVSVPKGTLIIRAAESIGTAIPRFCDHPLLDPAGACRECLVEI PDAGNGRGFPKPQPSCTMPVAEGMVVKTQVSSEMARKAQKGMLEFLLINHPLDCPICDKG GECPLQNQAMANGRGESRYDGVKRTYPKPINISAQVLLDRERCVLCQRCTRFADQIAGDP FINLQERGAVSQIGAYQGDDFNSYFSGNVIQICPVGALTSAEYRFRSRPFDLVSTVTTCE HCAAGCQLRTDHRHYEVKRRNAGNLPDVNEEWNCDKGRFAFRYGRGDDRVTTPLVRHNGV LEPASWAEALQTAAAGLTKAGTSVGVLTGGRLPVETCLSWSRFARVVLGTNNVDFRSRPH SAEEAAYLAARVAGHSLEESVTYADLETASRVVLVDLEPEDECPMIFLRLRKAWRRHKAT ITVVGTHLSNGSAKIGAELARCLPGQEPEALAQLVADGTIGEGTIVLVGERAATRPGTLS AINDLDSTVRVAWVPRRAGEMGAIEAGLLPQLLPGGRLVDDAKARVDIAAAWGVTNLPTQ PGLDTAGMLAAAQAGKLDALVVSGVELADMPDPTGAREAVENCGFVVSVEQRFSEVSARA DVVLPVCLLEETSGTFLDWEHRPGRVRVVNKQPATPMNEIRVLDALSSQMGSVSGLATVA QAHKAWRDLGQWSGGHPKMESTSPLVPQAPMVEAGSVGRVLETWRQLLEGSASLTGADAL VATAPAPVAVIDPLTAEQLGVTNGQLIDVCGPISLRVPVKIDTTMTAEAVWIPSLRGDST APQSRTTVPDAPGTVVSLSAVETETSREAGVA >gi|302034485|gb|GL383266.1| GENE 65 69319 - 70641 1150 440 aa, chain + ## HITS:1 COG:MT3240 KEGG:ns NR:ns ## COG: MT3240 COG1005 # Protein_GI_number: 15842728 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 1 (chain H) # Organism: Mycobacterium tuberculosis CDC1551 # 9 412 7 399 410 343 48.0 4e-94 MSPLEATIDPVWLIIVKVVILFVILLAWTIFNVWFERRVLAKMQNRIGPIMNSAWAGGVF QAVGDGLKLIFKEMLTPKGADKIVFNLAPVIAGIACFASWSVIPLGGQVSMFGHTTRLQI TDVPVAVLFILAVASIGIYGVVLAGWSSAGTYSLLGSLRSSAQMISYEVAMGLSLVTVFI FSGSMSTSQIVESQANHLVVGGFNTHIAGHYWLLLIPSFVIYVITMFGESNRLPFDLPEC ESELVSGYITEYSGFPYGMYFLAEYINMATLSAVCTTLFLGGYRAPWPLNYFGVIDSGWW GLLWFFLKTQLVIFFFVWVRAAIPRFRYDHFMDLGWKVLIPVSLGWVLMIAAWRTVINQG WGRNPVFLVVVGVILVALIVWAFMGGKTDSTADEAPDEPFDAFAGGYPVPPLPHQVQAPL AGAATATTVARRDHDENGGL >gi|302034485|gb|GL383266.1| GENE 66 70641 - 71237 481 198 aa, chain + ## HITS:1 COG:MT3241 KEGG:ns NR:ns ## COG: MT3241 COG1143 # Protein_GI_number: 15842729 # Func_class: C Energy production and conversion # Function: Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) # Organism: Mycobacterium tuberculosis CDC1551 # 1 162 32 191 211 226 67.0 3e-59 MGAWSGFGITFETMFRKSFTQGYPEKGKEKPMPPRMHGRHQLNRWPDGLEKCVGCELCAW ACPADAIYVEGADNTDEERYSPGERYGRVYEINYLRCILCGMCIEACPTRALTMTNDFKM ADTSRAKHIWTKDELLAPLKEGMEQPPHPRRLGDDEDDYFNGLPPSGQDDVRTGPANSGA TAHRDDDNDTQHKDEEAA >gi|302034485|gb|GL383266.1| GENE 67 71237 - 72091 881 284 aa, chain + ## HITS:1 COG:MT3242 KEGG:ns NR:ns ## COG: MT3242 COG0839 # Protein_GI_number: 15842730 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 6 (chain J) # Organism: Mycobacterium tuberculosis CDC1551 # 11 254 10 242 262 182 49.0 6e-46 MTTGLPLLAGLVPMVTASQWAFWLLAPIMVLAALVMVFAKKPVHSALSLAVVMICLAVQY ASQEAPFLFVVQIIVYTGAILMLFLFVVMLVGVDSTDSLKETLKGHKVAAMIAALAFVVL LILAVGNAVTTGVIGTDHPVGLGQANTAGGNNVKSLAELVFTKYVIVFEATSALLITAAV GTMVLAHGEADKKKSQRERVTDRMAAYAEHGSHPGVRPNSGVYARTNQIGAPALLPDGTV AQDSISGTLATRGAIIDAGELKAPTHRAFASISAARHEVQGELE >gi|302034485|gb|GL383266.1| GENE 68 72088 - 72387 355 99 aa, chain + ## HITS:1 COG:MT3243 KEGG:ns NR:ns ## COG: MT3243 COG0713 # Protein_GI_number: 15842731 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) # Organism: Mycobacterium tuberculosis CDC1551 # 1 98 1 98 99 108 69.0 3e-24 MNPNDYLVLSAILFAIGIVGFLTRRNALVAFMSVELMLNAANLALVTFAHVHGSLDGQVG AFFVMIVAAAEVVVGLAIIVTIFRSRRTTSVDDTNLLKF >gi|302034485|gb|GL383266.1| GENE 69 72398 - 74284 1603 628 aa, chain + ## HITS:1 COG:MT3244 KEGG:ns NR:ns ## COG: MT3244 COG1009 # Protein_GI_number: 15842732 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit # Organism: Mycobacterium tuberculosis CDC1551 # 13 611 11 616 633 544 53.0 1e-154 MTVLETGLFNVAWFMIAVPLVVAALLLVLGRRSDAWGHVLATVAPIVAFVIGLVLFIDLL GRGGASRAVDVGVYRFIDVGAWDLRVGLLIDQLSILFVLLITFVGSLIHIYAIGYMAHDT DRRRFFAYLNLFIAAMLTLVLADNYLILFVGWEGVGLASYLLIGFWFGRPAAARAGNKAF IMNRIGDLGLTMAIFTMLAQFGSVRFSDVSAKASGLTSTWATLLGFMLLLAACGKSAQVP LQAWLLDAMEGPTPVSALIHAATMVTAGVYLVVRSHEIYAHTGAASLAVAIIGTVTLLFG AWIGSAKKDIKKVLAGSTMSQIGYMMLAAGLGPAGAALAIFHLLTHGFFKANMFLGAGSV MHGTGDDTDMYHFGALSKVMPMTFWTFACGYLAIIGIPGTSGYFSKDHIIEAAFDKGAVF GVLALIGAGITAYYMTRLMMLTFLGTKRWRADVHPHESPAVMTIPLIVLAILSIFAGAFM NNWIGDWLAPATGAEVEHVGMWHMGVIGVVTLVVVILGIVAGWLLNRHNVPNEEPETHDP LLVAGRHDIYGDDINDVVVVKPGRWLAGGVAGFDRSVVDGLVNGAGSVTTACSQIIRKVQ NGYVRSYGLMMVVGVVVVGLVVVLGRMA >gi|302034485|gb|GL383266.1| GENE 70 74302 - 75795 1360 497 aa, chain + ## HITS:1 COG:MT3245 KEGG:ns NR:ns ## COG: MT3245 COG1008 # Protein_GI_number: 15842733 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 4 (chain M) # Organism: Mycobacterium tuberculosis CDC1551 # 4 492 6 536 554 375 45.0 1e-103 MSFPILTVIALLPFVGGVITMMLRGAAARATGMVFSLVTLVLGVYAFIVGVNGTNLSETH RWIRAVGAWYALGGDGLSLTMILLVVILVPVVLLAEWHVGDDETARWSTGAFFGLALMLE GLAIYCFAATDVLLFYLMFEATLIPMYFLIAGWGGPRRGRAAMKFLLYSLAGGLVMLFAV IGVGVHGGSFLLSDLAKVDFSGAIGKELFVGFFIAFAIKAPMVPVHTWLPDTAEQATAGA SSLLVGLLDKIGTFGMLRLCLGLFPAASDWATPFVLTLAIISVLWGAMMAATSSDLMRFV SYTSVSHFGFMVIGIFALTTTSITGSIFYMFNHGFSTAALFLVLGFLVRRGGTAKVDGYG GVQKVAPVLAGTFLFAGLATLSLPGTGNFVSEFMALAGAWSRHPIYVAISTIGMVLAAVY VLVTYRRTMTGPVQGVSEQVSDLNGREKLVLAPLIILLLVFGFFPRPMLHAIEPAATATM TQVHATDPAPVVKEGLK >gi|302034485|gb|GL383266.1| GENE 71 75792 - 77408 1396 538 aa, chain + ## HITS:1 COG:Rv3158 KEGG:ns NR:ns ## COG: Rv3158 COG1007 # Protein_GI_number: 15610294 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 2 (chain N) # Organism: Mycobacterium tuberculosis H37Rv # 20 538 5 531 531 352 43.0 1e-96 MNPALLITASGLPALLDVAAPHLEWGPLAPVFVLMAGACVAVLVEAFVPRSGRRPTQIIV TVATLVVAIASTLTTIARGTRIVAGQGTLAPDGPTLATWVILLATGLGTVVLFAERVGTT QTAFVASASSVPGSPLEAKAEQEHREHTEVYPLLMFAALGMMCFAAANDLIMMFVALEIF SLPLYLLCGMSRRRRLLSQEAALKYFLLGALSSALFLYGIVLLYGCAGSFKLGDLAAAGV TQVGSSKLIVAGMILVAVGLLFKIGAVPFASWTPDVYTGAPTPVSGWMAVATKLVALVGL MRVLYVGLGAMRWDWQIVLAVVAVASMGVGAIVGLAQTDMKRLLAYSAIAHAGFVLVGVV GAWTTQTGMAEGQTGSVSSVLVYMTAYGLASIGFWLLILMVRRAGGESTEIASWAGIGRS HPWIGVLVVIFVLSFAGIPLTAGFTGKLVVFLAGWRGGYAWLVLIGVLFSLVAAAFYLRI IVVVFFRSAKEGDDPVEVAEPSIAGWITLIVCAVFTIVMGVAPQPIIDLFNQASTFLR >gi|302034485|gb|GL383266.1| GENE 72 77414 - 77659 96 81 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313829355|gb|EFS67069.1| ## NR: gi|313829355|gb|EFS67069.1| conserved hypothetical protein [Propionibacterium acnes HL063PA2] conserved hypothetical protein [Propionibacterium acnes HL002PA2] conserved hypothetical protein [Propionibacterium acnes HL005PA1] conserved hypothetical protein [Propionibacterium acnes HL027PA2] conserved hypothetical protein [Propionibacterium acnes HL030PA1] hypothetical protein HMPREF9588_02545 [Propionibacterium acnes HL025PA2] # 11 81 1 71 71 126 98.0 6e-28 MRASLALTRSVNSLLALYDTVLLFQPSDRPVLVRLSPRRGLVIFHFTGLTVLASCRSAVV MVYRCSQAGVATLPDSGPGPH >gi|302034485|gb|GL383266.1| GENE 73 77601 - 78575 900 324 aa, chain + ## HITS:1 COG:Cgl0466 KEGG:ns NR:ns ## COG: Cgl0466 COG0142 # Protein_GI_number: 19551716 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Corynebacterium glutamicum # 8 322 33 348 350 245 44.0 1e-64 MSYSASSEFTDLVSAKLALIEDELGRQAGADTPFVTEAANHIISAGGKRFRPLLVVLCSQ FGDAVNDADLVRAAVVMELTHVASLYHDDVMDEASRRRGAPSANLRWGNSVAIMVGDYLF SKASLAVAELGVDFVKLQARTFSRLVQGQIAETRGPSQGQDPLAHYLKVVADKTGSLIAA SAVFGAMVSHASAENVAALEQFGEDIGEVFQLADDLIDITSTVTGKTPGTDLREKVPTLP TLLLRASDDPADAELKEMLDADLSDDAVLSDVLDKLRPNHVIDEARVEIQRRADRARTHL TPLPDGDAKQALEALCDEVVSRSS >gi|302034485|gb|GL383266.1| GENE 74 78606 - 79388 735 260 aa, chain + ## HITS:1 COG:SMc03194 KEGG:ns NR:ns ## COG: SMc03194 COG2243 # Protein_GI_number: 15966678 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-2 methylase # Organism: Sinorhizobium meliloti # 3 259 2 250 256 191 41.0 9e-49 MSRRLDLIGIGPGNPDWLTLAAVDAIQHLDVLFVVLKEHDVDDLVEFRREVLRRHRPDAD FDGLHIVELQDPPRPWKTAENYKAAVAKWRRQRLDQWTHAVADNLADGERGGFLVWGDPG LFESTLAIVKKLIAAVDADGGVPIELNVIPGISSSLSLASRHQIPLNRQGRALQISPARL LANGMPEGVDDVIVMLDGRQTFSLIDPTDIDIYWAAYIGTPDEILISGDLAEVREEIRSA RADAEKRLGWVFDTYLLRRR >gi|302034485|gb|GL383266.1| GENE 75 79424 - 80344 818 306 aa, chain + ## HITS:1 COG:AGc5061 KEGG:ns NR:ns ## COG: AGc5061 COG2301 # Protein_GI_number: 15890035 # Func_class: G Carbohydrate transport and metabolism # Function: Citrate lyase beta subunit # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 23 305 1 289 294 228 43.0 1e-59 MTGLQPALGAGFGCGTIVGMDSLRPRRSVLFMPGANARALEKARSIDCDGIIIDLEDAVA PDLKVEARERAAGVVKEHPYGYREVAIRVNGMDTQWYHDDLAAAVAAGPDAIAVPKVGSA EHVHAIVADMEAAGADESVKLWAMIETPRAVLDCLDIAEASDRLTVLIMGTNDLTKELRA SHVAGRAPVVTALQMCMLAARAAGTAILDGVYNDVRDVEGFTSQCREAQLMGFDGKTLIH PGQVGPANEVFAPDAEEVAEARGIIDAWENGNGSGVVTYQGRMIENLHVDTARRALAMAE AIEARG >gi|302034485|gb|GL383266.1| GENE 76 80361 - 80792 280 143 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4975 NR:ns ## KEGG: HMPREF0675_4975 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 143 1 143 143 247 100.0 1e-64 MSILVFGWVFCILSHSDPVLFTNAFVIVVVGVLGSYLIHEIGHWLALSVTSPDAEARWES TLLRISLIVRGSSSPRAIAVNAAAGPLACVALGALTLLIGGGLPSEARSTVRVIGWIYVA HAVFLIPPSTDGNTVLASLMHHR >gi|302034485|gb|GL383266.1| GENE 77 80872 - 81183 352 103 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4974 NR:ns ## KEGG: HMPREF0675_4974 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 103 1 103 103 154 100.0 9e-37 MKNPKVYLTSLIITIIATLALATGTILILMFSVHDNESAHLTGLFGSVYFQSSVEHSHNT VKATMGVASLPRLGAVAAVIFAFTLLVSFIVIKLKTYRESLLH >gi|302034485|gb|GL383266.1| GENE 78 81180 - 82574 587 464 aa, chain - ## HITS:1 COG:no KEGG:PPA1916 NR:ns ## KEGG: PPA1916 # Name: not_defined # Def: ABC transporter permease # Organism: P.acnes # Pathway: not_defined # 1 464 40 503 503 748 99.0 0 MTIMRFMGAYLVRVVVGKGVLKSRAARLGAFACVMLFLLTATILAVILTHDGAGEATTRD LVLTVSSLSSVVWTAAAFLIVKVLMADAGTMMAITHHLPITNRERQRAVGVLDGATTLLI VIIGMFATSVSTLVNFGISAIPGLTMCVVMPAAATYTVLEMSHRCCDLALARTPLGPARQ PILAVVLFFVVLALWRSMPTMLAAITSTPEPFTVWSLVFHDIGLHYGAPAVIGCFVVLLV LSLLPVMVLPTSPLDVRHRFVMFPLAGISNRFRNAAPQFQALFRSRYSLQAAVLSAGFVI LLATRIASPSSVWGAEPMTIGGFFQFATLAPTFRTFEPRLPASRFYLRMLAAQYALVSPM LVVAVLIDVFTGHPAHSTALAVAGVCGSALITIAVGIFIPARDDNPLSILLGCAIMLAIG TVLVVFCGILHLPATASIGLGIVSAVLLITHSIITISDQRKAAR >gi|302034485|gb|GL383266.1| GENE 79 82555 - 82716 113 53 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKRMMVMVRERFSRRRVRGAGVTVIRPCVGEVFPALATQMVSVSVIPAPYTQR >gi|302034485|gb|GL383266.1| GENE 80 82688 - 83509 507 273 aa, chain - ## HITS:1 COG:Cgl1972 KEGG:ns NR:ns ## COG: Cgl1972 COG1131 # Protein_GI_number: 19553222 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Corynebacterium glutamicum # 36 271 23 255 285 101 30.0 2e-21 MRPSDDADRLPSPRGGPVLASTSKFEGPFSCHEPVIEIKDLDFYYSDKPVLNNVTLAITQ GSCLALIGPNGSGKSTLCKILQGILAAPKTATTNVLGYPCGSRIACRAISYCADNDHLPQ FLTGAEFISYTLSLRSPSVLGKPRLRGATADIFERLGMAGRHDDLMESYSHGMLKKTQIA AALLAHSPVIIIDESLNGIDIEAQMTIEDALFNHIRQGGTQIICSHDFAMLDRCATHVAM LDYGNMVEFSAVDQLRARHATIRDLIVGYMGLG >gi|302034485|gb|GL383266.1| GENE 81 83509 - 83751 304 80 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4971 NR:ns ## KEGG: HMPREF0675_4971 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 80 1 80 80 150 100.0 2e-35 MPESQAFALQSTTEILKNKFDCALLRHDAWWLVFIAVLIGLGATLLAGMAIWCVVNQHGK FTGHWKWVKYGISISMECAR >gi|302034485|gb|GL383266.1| GENE 82 83917 - 84846 366 309 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4970 NR:ns ## KEGG: HMPREF0675_4970 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 309 1 309 309 610 100.0 1e-173 MFTVDVVKIVGLSLLRHSVRNVSFQRFLVGIAAILLLLPTACFRQDDAQAPVVDNLGTVF SPSNSLIREPTNSSATGTLKSTYEYLRLIDGHDLPDDDGYAHDHLVAALRPYLVNGGDSR QAHVNQLMAASSLKTLNALSDKERSEVDKRTRLPKGCITRKTVMTDLPIATMRREIGLSN DGLCLTPWKVKTTSSEEARWAMQALASADLFSNAKDAEKWGWESISDGYLRHLETYSGPS TTIAMALSAANTVSTLSRSQLQRIGDSLADAPCPRKDLGPALIRNGKPVKDKCSIESAYL LRYSGNWAW >gi|302034485|gb|GL383266.1| GENE 83 84848 - 85468 185 206 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 8 190 10 194 311 75 28 7e-13 MTVSWQGVTKTFPSGDSARGGCTIHCADATVDAGQACLIKGASGQGKSTMMAMIGGLLPV TSGHITIAHGHGDRDPEQARREGLVAYAFQYPFLTPYFTVWENVALCAEAEIAYQLLASC GMADLANQQASTLSGGQQQRVAVVRAVASRPAVLLADEPTASLDDDNRWAVEKLLQDYLD DGGTIIMASHQPIDLPHLSVTVEATR >gi|302034485|gb|GL383266.1| GENE 84 85465 - 86688 709 407 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4968 NR:ns ## KEGG: HMPREF0675_4968 # Name: not_defined # Def: efflux ABC transporter, permease protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 407 1 407 407 780 99.0 0 MSMSASRHAWVSLRRSSLPRQRWFIIVLALLGGCALAMNTIVAGHVRDQIDAADAGKRLN YVVVDSTGRGSSGPINAAARRQMMGMDHVAKVYEWSQAGLLCDDDNGLPQIVWATAQIPD VPPAAVAFDGPTRPVRPGEVIVPDAVNGHDLKALLGTTINVSYQRKTKASEAEAVPTKLK VVGLYDSSRPNNDGPDTVYVNVDDAKNWEAANAGMSPQAFDKQGVSRAYVEADSRAHVAD VHRQLSQAGFSATSQADVVGYADQMTSDVQRMQTILIVVICVAALVLGVSVGSTISRQRG SQIAVFKAFGRSGEWILGCLEMEALFIGVVMALGIVIVGLVLCGVAMALTAVGVNLGPVA MSPVPLADVLEQGAWFPLVLLAAVPLGCLPRTIVSVKTHKPYELLRE >gi|302034485|gb|GL383266.1| GENE 85 86756 - 88738 1408 660 aa, chain - ## HITS:1 COG:ML2613 KEGG:ns NR:ns ## COG: ML2613 COG3590 # Protein_GI_number: 15828409 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted metalloendopeptidase # Organism: Mycobacterium leprae # 9 660 16 666 667 579 47.0 1e-165 MTASFQDRDPDVRPADDLFRHVNGSWLSTTTIPNDQASTGSFRVLRDNSEAAVHDILEEL TSGDAHELRQAASASTDHEVNLMAELYRRFMDSAAVEAVGTIPLTPILARIDRVTTISEF MTLLGQHYRESLGALFYLAEESDPADPTRYVPWMGQAGLGLPDEAYYRDDDKAEVREAYV SHVTRMLTLAGLDNAADQAQAVMDLETEIASHHWDQVHCRDMKAAFNPKTFDDLASTHPG LHLEQWRQGARIPVEVLATVIDNQPSFFDGVEGMLVDERLDQWKSWARWHAISSLASYLS SAFVDENFDFYGRVLNGTPALKARWKRGVSFVESAMGEAVGKLYVARHFPPAAKERMDNL VANLLAAYRQSISTLTWMSESTRAEALDKLSAFRPKIGYPEHWRDFSGLRLPDGSLVDAV LACNSFQLDRTIEKLSGPMDPDEWLMFPQTVNAYYHPLRNEIVFPAAILQPPFFDVEADE AVNYGRIGAVIGHEIGHGFDDQGSTCDGAGRLRDWWTAEDRTAFEERTKGLISQYDALVP LQLQPDGPHVNGSLTIGENIGDLGGAGIAFKALQISFAGTEPEPIDDVPWQQRFFLSYAR IWREKQRDEALRTQIATDPHSPTEFRCNQIVRNIDAFHEAFGVTEDDPMWLAPEKRVTIW >gi|302034485|gb|GL383266.1| GENE 86 88676 - 88876 61 66 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAEEVISWADVGVPVLEGCGHRSTLSGALAMHFRLSQLRPLLGVPSQEGATTVRPQSRAA DCNRWS >gi|302034485|gb|GL383266.1| GENE 87 89395 - 89991 472 198 aa, chain - ## HITS:1 COG:no KEGG:PPA1908 NR:ns ## KEGG: PPA1908 # Name: not_defined # Def: protein associated to putative adhesion protein # Organism: P.acnes # Pathway: not_defined # 1 198 1 198 198 345 99.0 9e-94 MIFYTATKEAATTTHKNTVEEQYRHAPLNGLIIGAIVGAVWALVVLGYLISLLLTEQDTE LCPPELVMSPIFPVAGWLTGLWQRTAVDCDDITKQKRRVKAITAVMSSLAGVLMGSIERF LTTLRFINGKETLIYYLILLAVFSLIGWILGTVDITLKENGSHFLIKMGAATAIALFTSV AVSFYVFNAMQIIFFFEV >gi|302034485|gb|GL383266.1| GENE 88 90009 - 90467 120 152 aa, chain - ## HITS:1 COG:no KEGG:PPA1907 NR:ns ## KEGG: PPA1907 # Name: not_defined # Def: protein associated to putative adhesion protein # Organism: P.acnes # Pathway: not_defined # 1 133 56 188 191 253 100.0 2e-66 MLPILGWITGAWERSFTSRGDPAKIEHGIKVIGAAMMTAVGIMTAATFYTLVASQDTLHV PARAAYSTKAFILYLLPLMMFPCAGWALGGARVNNIHDTRWIISKMSIMAGVMLFLSVTF WFTTSLFIEALFFRVLSVFPNNARPCNNPRRP Prediction of potential genes in microbial genomes Time: Thu Jul 21 06:36:37 2011 Seq name: gi|302034484|gb|GL383267.1| Propionibacterium acnes HL025PA2 genomic scaffold Scfld35, whole genome shotgun sequence Length of sequence - 48555 bp Number of predicted genes - 53, with homology - 52 Number of transcription units - 29, operones - 14 average op.length - 2.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 905 228 ## PPA1715 hypothetical protein - Prom 1029 - 1088 6.3 + Prom 617 - 676 2.1 2 2 Tu 1 . + CDS 904 - 1155 117 ## gi|314982067|gb|EFT26160.1| hypothetical protein HMPREF9577_01169 + Term 1313 - 1367 0.2 3 3 Op 1 . + CDS 1637 - 2107 482 ## COG0471 Di- and tricarboxylate transporters 4 3 Op 2 . + CDS 2086 - 2946 556 ## COG0471 Di- and tricarboxylate transporters 5 4 Tu 1 . + CDS 3066 - 3869 793 ## COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 6 5 Tu 1 . - CDS 3973 - 4707 412 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 7 6 Tu 1 . + CDS 4904 - 5323 267 ## HMPREF0675_4763 hypothetical protein + Term 5401 - 5435 0.0 + Prom 5387 - 5446 2.3 8 7 Tu 1 . + CDS 5469 - 5684 129 ## 9 8 Op 1 . - CDS 5898 - 6539 390 ## COG0424 Nucleotide-binding protein implicated in inhibition of septum formation 10 8 Op 2 . - CDS 6541 - 6756 264 ## PPA1708 hypothetical protein 11 8 Op 3 . - CDS 6768 - 8342 1575 ## COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) - Term 8361 - 8401 -0.9 12 8 Op 4 . - CDS 8435 - 8806 366 ## HMPREF0675_4758 hypothetical protein + Prom 8821 - 8880 3.6 13 9 Op 1 . + CDS 9061 - 9777 578 ## COG0340 Biotin-(acetyl-CoA carboxylase) ligase 14 9 Op 2 . + CDS 9825 - 10541 591 ## COG3340 Peptidase E 15 10 Tu 1 . - CDS 10528 - 11058 398 ## PPA1703 hypothetical protein 16 11 Op 1 29/0.000 + CDS 11165 - 12337 906 ## COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) 17 11 Op 2 . + CDS 12330 - 12920 521 ## COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase - Term 12887 - 12928 -0.0 18 12 Op 1 . - CDS 12981 - 14942 1095 ## COG3250 Beta-galactosidase/beta-glucuronidase 19 12 Op 2 . - CDS 14918 - 15937 652 ## COG3250 Beta-galactosidase/beta-glucuronidase 20 13 Tu 1 . - CDS 16157 - 17077 725 ## COG1316 Transcriptional regulator 21 14 Tu 1 . + CDS 17546 - 18568 714 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 22 15 Tu 1 . - CDS 18571 - 19302 396 ## PPA1697 hypothetical protein 23 16 Op 1 . + CDS 19370 - 20446 650 ## COG0836 Mannose-1-phosphate guanylyltransferase 24 16 Op 2 . + CDS 20443 - 21138 343 ## PPA1695 hypothetical protein + Term 21194 - 21222 -0.3 25 17 Tu 1 . + CDS 21315 - 21572 361 ## HMPREF0675_4744 transcription factor WhiB 26 18 Op 1 . + CDS 21721 - 25050 1692 ## PPA1693 putative glycosyl transferase 27 18 Op 2 . + CDS 25047 - 26549 754 ## PPA1692 hypothetical protein + Term 26556 - 26592 -0.9 28 19 Tu 1 . - CDS 26555 - 26974 232 ## PPA1691 hypothetical protein 29 20 Op 1 . + CDS 27074 - 27481 168 ## PPA1690 hypothetical protein 30 20 Op 2 . + CDS 27491 - 27769 219 ## PPA1689 hypothetical protein 31 20 Op 3 . + CDS 27766 - 28785 504 ## PPA1688 hypothetical protein 32 20 Op 4 . + CDS 28782 - 29813 1040 ## COG0053 Predicted Co/Zn/Cd cation transporters 33 20 Op 5 . + CDS 29810 - 30241 385 ## COG0757 3-dehydroquinate dehydratase II + Term 30364 - 30407 0.3 34 21 Tu 1 . - CDS 30266 - 30508 198 ## PPA1685 hypothetical protein 35 22 Op 1 . + CDS 30870 - 31691 538 ## PPA1684 hypothetical protein 36 22 Op 2 . + CDS 31782 - 33890 1329 ## COG1640 4-alpha-glucanotransferase - Term 33917 - 33962 14.2 37 23 Op 1 . - CDS 33995 - 34270 460 ## COG0776 Bacterial nucleoid DNA-binding protein - Prom 34324 - 34383 1.7 38 23 Op 2 . - CDS 34463 - 35803 1188 ## COG1488 Nicotinic acid phosphoribosyltransferase 39 24 Tu 1 . + CDS 35890 - 36177 246 ## COG2127 Uncharacterized conserved protein 40 25 Tu 1 . + CDS 36368 - 36733 296 ## HMPREF0675_4729 hypothetical protein 41 26 Op 1 . - CDS 36737 - 37279 297 ## PPA1678 hypothetical protein 42 26 Op 2 . - CDS 37279 - 39243 1747 ## COG0370 Fe2+ transport system protein B 43 26 Op 3 . - CDS 39304 - 39633 170 ## PPA1676 ferrous iron transport protein A - Prom 39720 - 39779 3.9 44 27 Op 1 2/0.000 + CDS 39805 - 40659 522 ## COG0796 Glutamate racemase 45 27 Op 2 8/0.000 + CDS 40699 - 41457 699 ## COG0689 RNase PH 46 27 Op 3 . + CDS 41454 - 42068 395 ## PROTEIN SUPPORTED gi|74313511|ref|YP_311930.1| putative deoxyribonucleotide triphosphate pyrophosphatase 47 27 Op 4 16/0.000 + CDS 42069 - 42878 687 ## COG0207 Thymidylate synthase 48 27 Op 5 . + CDS 42838 - 43392 475 ## COG0262 Dihydrofolate reductase 49 27 Op 6 . + CDS 43422 - 44786 845 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair 50 28 Op 1 . - CDS 44838 - 46526 1488 ## COG1073 Hydrolases of the alpha/beta superfamily 51 28 Op 2 . - CDS 46523 - 46750 183 ## PPA1669 membrane-spanning protein - Prom 46828 - 46887 2.4 + Prom 46821 - 46880 3.9 52 29 Op 1 . + CDS 47123 - 47911 336 ## COG1737 Transcriptional regulators + Term 47938 - 47992 -0.9 53 29 Op 2 . + CDS 48011 - 48445 78 ## gi|313763375|gb|EFS34739.1| conserved domain protein + Term 48488 - 48516 -0.9 Predicted protein(s) >gi|302034484|gb|GL383267.1| GENE 1 2 - 905 228 301 aa, chain - ## HITS:1 COG:no KEGG:PPA1715 NR:ns ## KEGG: PPA1715 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 291 1 291 466 539 99.0 1e-152 MKQRFKSPTTAVLTGVLIAGSALLLPPLPAKADAVNEIHAKAGDQASVSLTAYADSPFYK KLPSYVSDSLRDGLFYYTGYYLEDGAAAGLANLTALHPTDTQDNSHTLDGDPVLAYCIEK NSLQERYHQDTGTLTKWSELKPHYNDNLTNALPKIGWIAKNGYPSKALDELEKQANAANG NDDATGSDHRDAVTATQAAIWHFSDDFTLKSDDITEYENGRLISVPDSAKKHISSLYNYL IKKAVPVSDPLDSTSDARGTSDFAGAALSLEAGQRGHQDRIIVPIQPISPAPTPTPTPTP T >gi|302034484|gb|GL383267.1| GENE 2 904 - 1155 117 83 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|314982067|gb|EFT26160.1| ## NR: gi|314982067|gb|EFT26160.1| hypothetical protein HMPREF9577_01169 [Propionibacterium acnes HL110PA3] # 22 83 1 62 62 116 96.0 5e-25 MWLDDPFVLVVLEKLCETKNYVKRLVEGFLFFSPFPSKSSNRRVIISKIIYGVNWVICVM RSRGKTSGRTCGELIALVAILSP >gi|302034484|gb|GL383267.1| GENE 3 1637 - 2107 482 156 aa, chain + ## HITS:1 COG:Cj0555 KEGG:ns NR:ns ## COG: Cj0555 COG0471 # Protein_GI_number: 15791916 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Campylobacter jejuni # 16 156 17 157 430 119 46.0 2e-27 MISLTIGLALAVSIAIGRVRKINIGLVAIPFAYIIGAFFMHIKPSDVIDLWPSHIFFAIL AISLFFGFAMANGTLAEIANGLLYRFRAAPVMLPVMIFLVSVLISALGAGYYAVMVLMAP IALLVCRKIGINPLVGALCADCGGRWGRTLWSASTG >gi|302034484|gb|GL383267.1| GENE 4 2086 - 2946 556 286 aa, chain + ## HITS:1 COG:Cj0555 KEGG:ns NR:ns ## COG: Cj0555 COG0471 # Protein_GI_number: 15791916 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Campylobacter jejuni # 5 285 156 430 430 163 31.0 3e-40 MVGLNGVIFRNLITGEKFSSNEAFVVSTTIFVVYLVMTFFIILTMLFISSHQRKRDGMMA QKVTFAEPIPLDRRQRTNVWLIGVFVVILLVPPILHLCMPHNSAVTWVNSRVDVSLFAIL FAVVCALMRVGEEKESLLHVPWSTLIMIGGMGMLVSIAVKAGTISLLAGWVGHTPRLLIP VVLCFLAAVLNMFGGSFVGVVAPALFPVVATLARATGMSPVLLYTSTTIGGLATGISPFS AGGAMVLGFTDKDERDDMFHREFAVGLPVCVGAALVVSFLCSLVLG >gi|302034484|gb|GL383267.1| GENE 5 3066 - 3869 793 267 aa, chain + ## HITS:1 COG:Cgl3018 KEGG:ns NR:ns ## COG: Cgl3018 COG0351 # Protein_GI_number: 19554268 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase # Organism: Corynebacterium glutamicum # 1 261 1 260 266 286 59.0 3e-77 MTKIALAIAGSEASGGAGAQTDLKTFHQLGVFGCTSLTCIVSFDPHNDWGHRFVPVDPQV IHDQIEAAVAVHGRVDAVKIGMLGTPTTIGVVAEALESYQFPKVILDPVLICKGQEPGAA LDTDNALREKLLPRADVVTPNLFETQTLAGVDEITSVEALKDAAKRIGDQGVPVVIAKAG TLLDTGTALDVYYDGHDCEVLEVPAVGQERVSGAGCTLAAAITAEIAKGASALDAVRTAK QVVVSAIENRMHGNAPFDCVYQGNYRA >gi|302034484|gb|GL383267.1| GENE 6 3973 - 4707 412 244 aa, chain - ## HITS:1 COG:DR0411 KEGG:ns NR:ns ## COG: DR0411 COG1028 # Protein_GI_number: 15805438 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Deinococcus radiodurans # 20 240 7 224 227 138 41.0 9e-33 MKAPTTSEISHNSHGAKSVLVTGATRGIGRAIADELGRDHHIIVGGRHQEAVDNVVSELP NASPFVVDLTDEEATAAAVSHLDHLDVLINSAGVSAASPGDIASQPRDEWRRVLEINVVA VAYLTRLVLPLLRASHGDVIMINSGSGFLRTPASGGVYAASKYALRALTHALREEERGVV RVTSIHPGRVDTDMQVELQAQAGRPYNAADHLRPQSVAVTVRAALEASPDAMIEELSVRP VFRG >gi|302034484|gb|GL383267.1| GENE 7 4904 - 5323 267 139 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4763 NR:ns ## KEGG: HMPREF0675_4763 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 139 1 139 139 209 98.0 4e-53 MNARAAVAVTVLLVVAGCAPSHGGAVPSPSAASATPAPAGAETLANLGFKYGPRNFRLPK GLAVTLRVDHVNNITLLTGPDTSGKVHDFLADNLSASGFTVTGNANGSLTFISNRGDTKG WSGGFTSSDEAAGLTLRHG >gi|302034484|gb|GL383267.1| GENE 8 5469 - 5684 129 71 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MMSSIHPVIGKQSFRLRRRKSEVSISPWDNPVRKDALKDIAAASMRSPVGSLAVMLITLT QHLLHVEGSHG >gi|302034484|gb|GL383267.1| GENE 9 5898 - 6539 390 213 aa, chain - ## HITS:1 COG:all3075 KEGG:ns NR:ns ## COG: all3075 COG0424 # Protein_GI_number: 17230567 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Nucleotide-binding protein implicated in inhibition of septum formation # Organism: Nostoc sp. PCC 7120 # 2 204 3 196 197 151 42.0 1e-36 MTTCFVLASKSPARLRMLRSAGIEPVVIASGADESHLRGEDAVAMTARLSRLKAHSVIES GALEEYPADRMIVVACDSVLNLDGRILGKPHTAERARQWWRRMRGHQGVLVSGHHVAVIV NGQLREQTRIGQTVVTFADLTDAEIDAYVDSGEPAAVAGAFTIDGLGGAFITRINGDPHN VTGISLPLLRQMLMDLDVEWSSLWNGPKGGHLS >gi|302034484|gb|GL383267.1| GENE 10 6541 - 6756 264 71 aa, chain - ## HITS:1 COG:no KEGG:PPA1708 NR:ns ## KEGG: PPA1708 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 71 1 71 71 136 100.0 2e-31 MNDAITVTKGNLTDEELGALVTVLAELTRPSPNAYVPDDRPIAFGWKSYWRTIREPFMPG QAAWRGSLRRY >gi|302034484|gb|GL383267.1| GENE 11 6768 - 8342 1575 524 aa, chain - ## HITS:1 COG:ML0731 KEGG:ns NR:ns ## COG: ML0731 COG4799 # Protein_GI_number: 15827308 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) # Organism: Mycobacterium leprae # 3 524 20 549 549 686 64.0 0 MEIDIHTTAGKIADLGRRIDEAVNAASPSAIEKQHATGKMTARERILRLLDEDSFTELDE FARHRSTNFGMDRKRPYTDGVITGVGAIHGRPVCVFSQDVTIFGGSLGEVYGEKICKIID FAVKTGCPLIGINEGGGARIQEGVASLARFGDIFRRNTRASGVIPQISIIMGAAAGGHVY SPALTDFIVMVDQTSQMFITGPAVVKQVTGEDVSLEELGGARTHSVKSGNSHYLANDEDD ALEFVRGLISYLPQNNLEDPPFYDDGEADLTITDHDRKLDVLIPDSSHQPYDMHEVITTV LDEDTFLEIHELFAPNVICGFGRIEGRAIGIVANQPMINAGTLDIDASEKAARFVRTCDS FNIPVLTFVDTPGFLPGVEQEHDGIIRRGAKLIYAYAEATVPLLTVVTRKAYGGAYIVMG SKTLGADVNLAWPTAQIAVMGAEGAVSILHRRTLATDPDPQAKRKELIDEYETTLSNPYQ AAERGWIDQVIHPHETRASVIRTLRLLRTKRETLPPKKHGNIPL >gi|302034484|gb|GL383267.1| GENE 12 8435 - 8806 366 123 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0675_4758 NR:ns ## KEGG: HMPREF0675_4758 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 123 1 123 123 157 100.0 1e-37 MQTLYEHSRRILAVFLIAALLCLAIIGPLPDTQSSATLTCTTTGIAAIFLVVVASHADPH FGLDSLAFIVTFLASAVCRRAATNPVSHSLYLPVIITAVALAAVAVVLRASASVSRQETT ASQ >gi|302034484|gb|GL383267.1| GENE 13 9061 - 9777 578 238 aa, chain + ## HITS:1 COG:Cgl0689 KEGG:ns NR:ns ## COG: Cgl0689 COG0340 # Protein_GI_number: 19551939 # Func_class: H Coenzyme transport and metabolism # Function: Biotin-(acetyl-CoA carboxylase) ligase # Organism: Corynebacterium glutamicum # 1 236 43 267 269 104 34.0 1e-22 MAAFVRAGGTSFCLLVADHQEGGRGRFTRSWQDVPGTSLAISALVPNDRPSQDWGWLSMV AGLAVVKVIKEVGGADRSRVTLKWPNDVLVDLDTDQGGKVCGILSERVDGPAGPHAVIGI GINVSMGRDELPLPTATSLALCGLNHDKNELLASLLIHLDELLTVWLETGTVRDQYVARC DTIGTPVRLTFDPEIVGGGEGAIEGIGVDVDVDGAIVVETSDGRRSFNAADVHHLRTR >gi|302034484|gb|GL383267.1| GENE 14 9825 - 10541 591 238 aa, chain + ## HITS:1 COG:BS_ygaJ KEGG:ns NR:ns ## COG: BS_ygaJ COG3340 # Protein_GI_number: 16077943 # Func_class: E Amino acid transport and metabolism # Function: Peptidase E # Organism: Bacillus subtilis # 1 214 1 223 251 170 41.0 2e-42 MTTHILALGGGGFSMSNRGEPTALDRHILDLSGKSSPLVCFAPTAAADDPVYVNRFLAAY SALGVRNMVLTLWQGAAESVERLSQADIVVSGGGSAANLMALWKMHGVDHVIRRMIAADS DVVLAGVSAGAACWFSGCLTDAFGDLRAWRGGMGLLDGSFCPHFDGESERAPIYAQAVAN GVLPGGYAVDDGAAVHFVDGMFAGAVAEHERAEVSRFSASDEPTSSGVLREELDVTVL >gi|302034484|gb|GL383267.1| GENE 15 10528 - 11058 398 176 aa, chain - ## HITS:1 COG:no KEGG:PPA1703 NR:ns ## KEGG: PPA1703 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 176 1 176 176 298 99.0 8e-80 MVRVGQPLRHNRNETVLVHTRRHAKALFWPVVMGFVGVVGAAALLGIMPSDMRAQYWPIV VTIAVALIIVGTLSPWLTWFTTTMTITDRRVMLRHGVVVRRGHDVMIDSLIDVSWQAALF DRMMGCGTLILTTPSDQMVLNDVPGARRVVDLFTDLTDNGYGEYLNDYCEESVTAR >gi|302034484|gb|GL383267.1| GENE 16 11165 - 12337 906 390 aa, chain + ## HITS:1 COG:MT3376 KEGG:ns NR:ns ## COG: MT3376 COG0026 # Protein_GI_number: 15842866 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) # Organism: Mycobacterium tuberculosis CDC1551 # 4 384 12 393 429 333 50.0 4e-91 MNVVTSYTIGIIGGGQLARMMHQAAIGLGVRTRLLASDPEESAAQVMSDVVVGSHLDHDA VMNFAAGCDVVTFDHEHVPTVLVEEMEEAGYAVRPGAAAMVHAQDKVVMREFMEREGFPN PAWQVCDTPEDLVSFGHDRGWPVIAKTSRGGYDGKGVFKIDGPDGAGEPFDAAGDLADGK QPIRILAEEFVDFRRELSAVVVRSPSGQGAAYPVTETIQRHGVCAETISPAPDLSSDRQV ELQTMALDIAGRLDVIGVLAVELMEREDGSVVVNELATRPHNTAHWTIDGAETSQFGNHM RAVLNLPLGSPALIAPVVVMANVLGGSEEDLTGALQHCFARDPELRVELYGKSVRPGRKV GHVTCLGNDIETTHRRARHAAAYLMGEHDA >gi|302034484|gb|GL383267.1| GENE 17 12330 - 12920 521 196 aa, chain + ## HITS:1 COG:Cgl0694 KEGG:ns NR:ns ## COG: Cgl0694 COG0041 # Protein_GI_number: 19551944 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase # Organism: Corynebacterium glutamicum # 33 192 2 161 165 185 63.0 5e-47 MPETTTASRKPRRGEKVKTTTGGARRLACDANGPQVSIIMGSDSDWPTMEPAAQVLTDFN VGFEADVVSAHRMPEDMIEFGRGAHKRGIKVIIAGAGGAAHLPGMVAGLTPLPVIGVPVP LAHLDGMDSLLSIVQMPGGVPVATVGVGNAKNAGLLAVRILAASTPELCEAMVKYQSDLH DVAAGKGEKVRRHSCP >gi|302034484|gb|GL383267.1| GENE 18 12981 - 14942 1095 653 aa, chain - ## HITS:1 COG:TM1193 KEGG:ns NR:ns ## COG: TM1193 COG3250 # Protein_GI_number: 15643949 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase/beta-glucuronidase # Organism: Thermotoga maritima # 1 652 353 985 1087 270 30.0 8e-72 MRADLELMKRHGVNAIRTSHYPPNVRFLDLCDEYGVWVLLECDLETHGFERGGWDGNPTN DDRWYDCLLNRIQRTVERDKNHPAIIGWSMGNESHCGEGIRLMNDWVKNRDPSRFTHYEG DDAHAICDVWTVMYPSMEWVEAVRDRTVMPGAEPAPQTGRELGLPFFMCEFAHAMGNGPG ELDAYEERCFDPHFHRDRMHGGFIWEWIDHGIDTGRGYAYGGDFGEVLHDSNFVCDGLVL PDRTPSPGLLEFTATMGAVRIEVDSEQLRDGNGITVINRRDFSDLSDLTFVWQLIDDDEY VQTGVLEVGALAAHQIWTGTVPLPDEISDRMVVVVEAKLVRDTIWAPAGHVVARTSALLV PKPGPRLYLPASSQPHRDGTGWSLGPAHFDRRGRLVTWGNANLVAPVLDLFRAPIDNDRA SSLARNAIGDAALAAGLDRLVHTTTSVRDEGDELVVVTRSAAAAARNSMTTTWSWRAIQT NDGSEGVHLDLHVDPHGYWPTMLGRIGVTIGLPAEWTTVSWFGLGPTENYPDSQHTAIWG RWNGEVDDLQNPYAMPQENGLRQGVHELTISGSNGGLRITADGSWPAFAARPWTSQALLT AAHTWDLKPDGHTWLTLDAVSAPLGSTSCGPMPIMSHRLYAQPVDLSLTLSLI >gi|302034484|gb|GL383267.1| GENE 19 14918 - 15937 652 339 aa, chain - ## HITS:1 COG:TM1193 KEGG:ns NR:ns ## COG: TM1193 COG3250 # Protein_GI_number: 15643949 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase/beta-glucuronidase # Organism: Thermotoga maritima # 38 315 43 335 1087 166 33.0 4e-41 MVANADTAHRLDDALTNLIPWHGPVAPRAHLHTDAPTLDLSGTWRFQLVDSPHDAPAGFP DPQFDDTDFVDLAVPSSWHMVDPAGNAPFGRPAYLNTNYPILVPASDEDIVVPNENPTGC YRHTFEVGKEFTDAKRVLLRFEGVDSFARVWFNGVELGWTKGSRLTSEFDVTSQLRSGRN VLAVAVSQWSDGTFLEDQDMWRMSGIFREVTLLARPHGGIDDLFVHASWDGDAKLLIDGP EGATVAIPELELATTCNTEVAIPDAQPWTAETPKLYDATVSTDTETVTIRIGFRSVAIAG DIITVNGEKSYSVGLTATNGIHAPGEPSVSRRCALTSSS >gi|302034484|gb|GL383267.1| GENE 20 16157 - 17077 725 306 aa, chain - ## HITS:1 COG:Cgl2840 KEGG:ns NR:ns ## COG: Cgl2840 COG1316 # Protein_GI_number: 19554090 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Corynebacterium glutamicum # 2 295 1 288 288 180 38.0 3e-45 MLLLAWVVWLVAVPSYALGHTGTVDATPDGPRGADHPGTLVLLVGTDERQNLTPRQQKQL GTGTEAGLRTDTMLLLYMPPEGKDVLISLPRDTFLRIPGHHHNKLNAAYSMGGAKLLVQT IEKATNLRINGYVEIGFGGFVQMVDAVGGVHVTLNKPMVDKDSHTNLPAGPQNLDGVQAL GYVRMRKADAEGDLGRVKRQQQVAAQVAKKTLSPWTFINPVRYWKVNMAASKAVKLGTDT SILTAFKTARGLMKVSGNDGIKMTVPVSTASAYTSAGSSVLWNDNKAAQLWDDLRSGDTS KVTELS >gi|302034484|gb|GL383267.1| GENE 21 17546 - 18568 714 340 aa, chain + ## HITS:1 COG:AGl1604 KEGG:ns NR:ns ## COG: AGl1604 COG0463 # Protein_GI_number: 15890918 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 11 334 19 328 338 144 32.0 2e-34 MSSYLAPPVSVVIPVRNEERYLEESVAGVLNQGYPGPMEIILAIAPSTDRTAEIAQDLAV RDDRIRVIDNPDGTTPKALNLGVAVSQYDIIVRVDAHGELGPEYIATAVELLERTGAANV GGIMDAKGRTPFEQAVAVAYTSKLGLGNSAFHQGDAPEGPAETVFLGVFRKADLEAVGGF CPEFDRAQDWELNYRLRQSGREVWFSPNLRVTYRPRSTVKALAKQFFRTGQWRREVMRRH RDSVSLRYVAAPIAVTGITAGTILGLIGVVHAAKGTSLKRWPLIGWAAPLGYASIIGVGS AAMKRDLDPGVRARLPLVLAIMHMSWGAGFLVGLGDRAND >gi|302034484|gb|GL383267.1| GENE 22 18571 - 19302 396 243 aa, chain - ## HITS:1 COG:no KEGG:PPA1697 NR:ns ## KEGG: PPA1697 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 243 1 243 243 429 99.0 1e-119 MGAMVSLTRPTPTRSSDPLTALCQRSQNAGALPLLTWYHGADRGELSARTLLTWVTKSVY LLDSEGVEPGGVSRLSVCGVRPGHWTSCVWLLASWWAGLRVDLTGQEEAALEVIGPDVAP VNSPDVLIQCSLAPLATACETLVPGAIDNADVLAAPDDLVAARPAATNAVWLTGRQEWTG EQLFSLVPLNQPVLLSPDRIRLGGSELVATTLTSCLLGGGSLVLVESTDDLATIAAQEGA VDV >gi|302034484|gb|GL383267.1| GENE 23 19370 - 20446 650 358 aa, chain + ## HITS:1 COG:DRA0032 KEGG:ns NR:ns ## COG: DRA0032 COG0836 # Protein_GI_number: 15807702 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Mannose-1-phosphate guanylyltransferase # Organism: Deinococcus radiodurans # 5 351 17 364 372 229 38.0 7e-60 MQHILILAGGSGTRLWPLSHQGEPKQLLELIDGVSLLRMAYERVAGLVPDANILVCTGSS YADTVAKLLPEVPAENILGEPVGRDSLSAVAWPAGIIADRDPDGVMAVVTADHIIRPVDD FRAALQHGFDLANTDPTALVTFGVVPTEPNTGFGYLHRGGRLRPGSRAHQVLEFVEKPSA EVARQYLDSGEYWWNSGMFVWRAATLLDCLSQLKPQTRHHVDELVADPSRLAEVYPCMEK VSVDIAVMEPASHGGCGVHVAAIPLEIQWYDVGSYEALAPHLPSDGMGNNVSGLTVSVDS AGNLLINDRPDAVLAVAGLHDMAVVSTDRATLVVPMSQSQQVKAVVAEVAARAGARYA >gi|302034484|gb|GL383267.1| GENE 24 20443 - 21138 343 231 aa, chain + ## HITS:1 COG:no KEGG:PPA1695 NR:ns ## KEGG: PPA1695 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 231 1 231 231 326 99.0 4e-88 MSNAREIREPLAWTVIVVSVGFLVAFVVRVVKMLTHDRSGLFGMARSLSGSSLGIGMILL LLAAVLVCRFIHPATPHAELLGKVSACVVAVAAGCDLVLALLSPIHGPGGAFGAALGLFG DLLAIAIKALAAWVLLVLTRPEAASVQDNEDPAEPEAVQDGSADRSVVADEAEGPAHGDE VSWPAGVGAVWTRAGDAASGAGASSWDQNDAGGGWTTEASGPSRDEPDGQA >gi|302034484|gb|GL383267.1| GENE 25 21315 - 21572 361 85 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4744 NR:ns ## KEGG: HMPREF0675_4744 # Name: whiB_2 # Def: transcription factor WhiB # Organism: P.acnes_SK137 # Pathway: not_defined # 1 85 1 85 85 154 100.0 8e-37 MDEILTLLAGGGDDEPEWHDKALCAQTDPEAFFPEKGGSTREAKRICESCEVRQECLEYA LANDERFGIWGGLSEMERRRLRKRA >gi|302034484|gb|GL383267.1| GENE 26 21721 - 25050 1692 1109 aa, chain + ## HITS:1 COG:no KEGG:PPA1693 NR:ns ## KEGG: PPA1693 # Name: not_defined # Def: putative glycosyl transferase # Organism: P.acnes # Pathway: not_defined # 1 1109 1 1109 1109 2022 99.0 0 MSDEKYSAETGPGESHQCDRSDAPRTAEGLTDWTILVIPSTRIDPEDWAWAHEQRKPVDP DITVDQVAAILLVHQAAGWLPRALNALRRSGERAAVQIAVDLGSTDGSSDLLVAAVDEGL LDECVTASADTTPGEGINLAIDRLSDGVTHIWILHDDVEVRRDSLTCMLREASRKPHPDV LYPTLLKPARHNYPEFIDEQGQSVSTGGARVLPVVDRGDIDQKQADPGPILGGSTAGMFV RVDVWRRLGGFDPALPLFRDGVDFGWRANEAGMVVRTAPSCTIHHRQAGRGWQRESHLAP RPDVTDRLAGMRMVAARTGHPTRTSLALLVASVWRFLVLMVGKAPSRAVDEWRSGLQLWR SRSVTREMTQRLQDFHAQCDPDDLENTNRLLPSRRSVWVRAVDRYAGDLSDRIHPWRNED GTTIDDLTGDDFTVRDHRSVVNPYTVMVSLMVVIGIVACRGLYGSGRATSTWLAPAPCGL AGAWHRWLTAVPGLSGGNAPWLAWPAFGSVLTIGEPEVLVRILLVVTPLLTAMSAHRLFR RVVGLGTTTVLLASFWGMLPVLTGGLARGSVTALALGVILPHMALHTWRLVNPETVDVVE LRGADTGSHQVGGVSSAGGLALWSALAISLVPALWVYPVAVAVGILMTRPRRLLLGSIVV LGPLLVISPWIPRLITEPGRMATGAEPVLSPAVETRAGLWLLVGRAIVPGTAPTVFTVIA MAPLWIAALWAVWRLVIDRSASIGSLTGHPRGRVLALTIVYLVCLVLTGVASRTLVTVWN VQVHPAIEPWQLVGAGVLLILVAAARQPAMLQRAEADHLPADESPTLGQLLVGIGNRWLP WVLTISVAASGVWWLVGGARGPMSTTAATRPAYVTAVEDSARHTRTLMVNVHSGSAHWNL VDSNNPSWGSGERPTISSDSRIADSAADLARAVATGAVPDDLADRLSDLGIGHLWLRGAG ADVVSQVGNASGLAAANTDPTTTVWTVDGHPSRALLSSRGSGQVPVAGKVTESGTVTILE PRDHRWRVEVGGTRLSPAVRHGIGESYQVGSARGDLTWSMPTQRWAGAIELVALLILLVV AGPQAAQRNRIAAPRRSLSRKPRRRQEES >gi|302034484|gb|GL383267.1| GENE 27 25047 - 26549 754 500 aa, chain + ## HITS:1 COG:no KEGG:PPA1692 NR:ns ## KEGG: PPA1692 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 500 1 500 500 787 99.0 0 MSDRPRRALADDEEPEEIPEVRFVEEGAIPARRAAGSENVSDQPTPHAARAMAQVPASGE DSCDELTEPDKKAGRYWKGPVWAVTLAIVAIAMSLATSVIPPMQRSAAKVQPISSGRTLV CPPSQGKASLAAGSSGGSLQVGISVEKLSEASVPVMTNVDTSAGYIRSTAGQRRPSGSAL SSEGGMTTWVPCIGAATGGAVSVTNPSTSDLVVVNSDIRAATVDVTMLGPKGEIVTAGMR GIRVSPGQTKVLPMSVWDNGATPVTALVNAREGRVVVGARMWAGQGHDTSAMTQAAKTLF LPAVPAKVSTATLIISNPGTRRLSVSVTALAGRGPFTPDGADEIDIDPRSTIQVDLSKAL AGEGVGLRLSADDPVIARLFVQGKPGTTDNALVSPGGSSKVLEQTVGTAGTLELSNPGRE AVTFSGELTGTHGEKTAIEGTVPAGSTWSGKVPAAGHLHIVGSAPLIGGVISASGLAVLP LEAVAAMTNGRSVDVDPQLR >gi|302034484|gb|GL383267.1| GENE 28 26555 - 26974 232 139 aa, chain - ## HITS:1 COG:no KEGG:PPA1691 NR:ns ## KEGG: PPA1691 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 139 23 161 161 263 100.0 3e-69 MSKRRNRHSRGQRGPVVLPRSYGGRIDRVDPTHAEFFTACLTQAVQQVHMSCPGILDNVV VGAEDVPTMPDWTEGRVPLSSAVDGSEHSPAKIVIYRRPLELRTASRRGLAILVHRTLVE QLSALTGTPVETIDPSIDD >gi|302034484|gb|GL383267.1| GENE 29 27074 - 27481 168 135 aa, chain + ## HITS:1 COG:no KEGG:PPA1690 NR:ns ## KEGG: PPA1690 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 135 19 153 153 223 99.0 1e-57 MTISVWRTVPWVRECIRPGCSRPAVATLTYVYAERTAVVGPLGPSHEPGAYDMCAEHAEA LSAPVGWEVIRLPGIDNPAPDPPADDLMALAAAVREVGMLEDEVLPEPDPASVHVLGRRG HLSVITDASRDVTGH >gi|302034484|gb|GL383267.1| GENE 30 27491 - 27769 219 92 aa, chain + ## HITS:1 COG:no KEGG:PPA1689 NR:ns ## KEGG: PPA1689 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 92 1 92 92 162 98.0 4e-39 MPDLPLAPEALDLSPAFLEVAACSACHSRFALDFDSGELVCSSPSCGLAFLVRDGVPDLR LDAARKRETGQGVTAEDTEAFEPTHRHEMRPQ >gi|302034484|gb|GL383267.1| GENE 31 27766 - 28785 504 339 aa, chain + ## HITS:1 COG:no KEGG:PPA1688 NR:ns ## KEGG: PPA1688 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 339 1 339 339 568 100.0 1e-160 MTFDDSRLDAPLDALAERVLRQLASTGARIRRDSADLGEVRRTVGEWGQPRGVLVVGPEA RLVRSVLEPICPVPLVAWPFLRLPAWVGPLDLVVALDSDGRCAAQVAEARRRGSAIILAS SGETEAWQAAGSHGTARIQMASEDAMSAAVAALSVLSDLGLGPVVDPGQVARVADMVAES ASPHHDLAVNEAKDLACALADAEPLLWGGSVLAARASRRLAQWMRRATGRIALSADSAAL RPVIDSAPRRDPFADPDLDGETRRPVLVVMDDAETEHAAARRDLEQLCAAHDVTVRSVTL PLGIDEQSSPMSRYVALLLQGSFAAVYVALGLDRLKEMT >gi|302034484|gb|GL383267.1| GENE 32 28782 - 29813 1040 343 aa, chain + ## HITS:1 COG:L67760 KEGG:ns NR:ns ## COG: L67760 COG0053 # Protein_GI_number: 15673428 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted Co/Zn/Cd cation transporters # Organism: Lactococcus lactis # 23 310 8 287 314 161 37.0 2e-39 MSQAHAAQRPNGAKEPANPTQGGRKAIIAAASANLAIAVTKAIAWALTGASSMLAEAIHS VADTANQVVLMMGGKESHKEADEDHPFGYETARYLSGFIVAIVIFTLGGLFALYEAYHKI GATLGGHPDELLDSQWWWVPLAVVMISLCAEGASLRTALKESSQDREGMTILQYIRKAKA PELPVVMLEDSAAVLGLIFAFLGVGLTLLTHNPIFDGIGSACIGILLVVVAGVLSREMKS LLEGESAAPESRKAVYDALIHSDGVDSVIYMKTVHLGPETILLAAKIAVDPTDSAFEVAR IIDNAEASVRAAEPLVGPLFLEPDIRYGDKRIKDGEERPEDQS >gi|302034484|gb|GL383267.1| GENE 33 29810 - 30241 385 143 aa, chain + ## HITS:1 COG:MT2612 KEGG:ns NR:ns ## COG: MT2612 COG0757 # Protein_GI_number: 15842071 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate dehydratase II # Organism: Mycobacterium tuberculosis CDC1551 # 1 141 1 142 147 155 57.0 2e-38 MSKQILVLNGPNLGRLGRREPQIYGTTTHDDLAARLIEYGRELGLDVEVRQTDSEERMMG WIHQAADDRTPVVINPAAWSHYNIAIADALVQLVAPCIEVHISNIAAREEFRHHSVVSAH VTGTIAGLGLKGYELALSWLATD >gi|302034484|gb|GL383267.1| GENE 34 30266 - 30508 198 80 aa, chain - ## HITS:1 COG:no KEGG:PPA1685 NR:ns ## KEGG: PPA1685 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 80 19 98 98 150 100.0 1e-35 MSTQVAPSSSTAVEEKTRPSFDDGDAERFSHYVPKAKLTDAMVNGTPVVALCGKVWVPSR NPEKFPVCPECKEIFESMNR >gi|302034484|gb|GL383267.1| GENE 35 30870 - 31691 538 273 aa, chain + ## HITS:1 COG:no KEGG:PPA1684 NR:ns ## KEGG: PPA1684 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 273 1 273 273 509 99.0 1e-143 MTNATPPPMGWYPDPAGSEQERYWDGERWTLNLRNPPDPQPHPGVGHVPETLAPVSRVPS SPRPNAAVSRRGNADRSQSPAQSRWGSTADGVPLAGWWWRVLSTIIDAVLVWIVVGLTMH ETVASIVDGYQTFLATSMRAVNAGASPSDVVTMQSLMKAGFVSDLSNLVGAVIISQAIYQ FIMLAACAGSVGQLICGLRVVTLNKGKEHRRLVWWRALIRATVWACVEIGNQAIVLLTPF SYLMPLWQRSRQTIHDAVAGTQVVRPPHQSGVE >gi|302034484|gb|GL383267.1| GENE 36 31782 - 33890 1329 702 aa, chain + ## HITS:1 COG:MT1831 KEGG:ns NR:ns ## COG: MT1831 COG1640 # Protein_GI_number: 15841250 # Func_class: G Carbohydrate transport and metabolism # Function: 4-alpha-glucanotransferase # Organism: Mycobacterium tuberculosis CDC1551 # 1 699 1 713 724 723 54.0 0 MSLTDPHLTTLADHFGIARDYYDWKGQYTEVGEATVIAVLDGLGIDASTPERAERACHEV TNRKWRRVLPGIVVLREGQEGRVDVHVNAGEWVEVHVVCEDGQHRECWQVDNWNPDRHVD DRWIGEATFGIPGDLPLGYHTIVATTADHRATSTLVVSPNWLGLPRSMGSSRVWGHAVQL YSTRSRASWGMGDFSDLADLSTWAATQGADYVLVNPLHASQVVSPIEPSPYLPCSRLFLN PLYVRPEIIPEYADLDVYERSQARLARAQAAADVEAIDRDRSWNAKLPVLEAVHALGLEG SRELSYQAFRRLRGTRLGDLATWCALTEVYGNDWRTWPEEYQRPSNRAVSEFVRAHEERV DFFMWLQWIADQQLSAAQSAGRDAGMSLGLMCDMAVGVSGAGADAWMLGKLFADGVCVGS PPDAFNQAGQEWGQPPMRPDILADLAYRPFRDMVRAALRHAGGIRIDHILGLFRLWWVPV GLGPRMGTYIRYDHEVMVGILALEAHRAGALVVGEDLGTVEPWVRAYLRERGIMGTSVLW FENGENGNPLPPEQWREYAMSSVATHDLPPTTGYLAGDHVEVRHELGLLTESLEHERAEV ARQTATWIAILRERGVLVGDDPSEEDIVLAMHRMLTRTPSKVLNATLTDAVGDRRTQNLP GTTNEYPNWRVPLSHPDGSPMWLEEVFTDERAARLSHVMNEK >gi|302034484|gb|GL383267.1| GENE 37 33995 - 34270 460 91 aa, chain - ## HITS:1 COG:SA1305 KEGG:ns NR:ns ## COG: SA1305 COG0776 # Protein_GI_number: 15927054 # Func_class: L Replication, recombination and repair # Function: Bacterial nucleoid DNA-binding protein # Organism: Staphylococcus aureus N315 # 1 89 1 89 90 65 49.0 2e-11 MTKSELIKTVAKQASLTEAQTNEAVKALTDVITAALAKGEKVQLPGLFTAETVERPARNG RNPRTGESMTIPAHKAVKISASSTLKKAVAD >gi|302034484|gb|GL383267.1| GENE 38 34463 - 35803 1188 446 aa, chain - ## HITS:1 COG:Cgl2467 KEGG:ns NR:ns ## COG: Cgl2467 COG1488 # Protein_GI_number: 19553717 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid phosphoribosyltransferase # Organism: Corynebacterium glutamicum # 2 430 13 440 446 387 53.0 1e-107 MSTALFTDHYELTMVEAAMASGTANRRCVFELFPRRLPEGRRYGVVAGTGRVLDAVENFR FTDEDVSFLERTGVVGPHMAEWLSHYRFTGSIHGYAEGDLYFPGSPLLTVEGTFAEACVL ETALLSIYNHDSAIASAASRMVMMGEGRSIIEMGSRRTHEESAVAAARAAWIAGFGPTSN LAAGIRYGVPTSGTAAHAFTLLHDTEEEAFRAQLAAYGEKTTLLVDTYDIDNAVRTAIRL TEGRLGAVRIDSGDLSIVARQVRNLLDDLGAPNTRVIVTSDLDEWQIAALRGAPVDGFGV GTSLVTGSGAPTCSFVYKLVARATSDSPDAELLPVAKKSSHKNTVGGRKYAVRRIGSGGI ATAEVVGVGQPPAADADDRNLIVPLIVNGEVVGREPLETARKRHQAAIAELPISGRRISR GDQAIPTVMVKQGNDGADTVLGASLS >gi|302034484|gb|GL383267.1| GENE 39 35890 - 36177 246 95 aa, chain + ## HITS:1 COG:MT1373 KEGG:ns NR:ns ## COG: MT1373 COG2127 # Protein_GI_number: 15840786 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mycobacterium tuberculosis CDC1551 # 17 91 25 99 101 89 54.0 2e-18 MSVATAEPMTHRLVGQESTWTTVVWDDPVNLMDYVTMVFMRYFGYPRERATQLMIQVHNQ GRATVAEGSKEEMEVAVHAMHGYGLQASVEKGGQG >gi|302034484|gb|GL383267.1| GENE 40 36368 - 36733 296 121 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4729 NR:ns ## KEGG: HMPREF0675_4729 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 108 66 173 186 187 96.0 1e-46 MRRSILPSAYRDDDSADAQFHVDHDAEDVAARWEDAQSLSADVETLHRTGCISMNPEMTQ RWLRTVNALRGMMAARLGIIDQVTADEVARAAREELGAEEECVYEWLGLVVEVLVEVELS E >gi|302034484|gb|GL383267.1| GENE 41 36737 - 37279 297 180 aa, chain - ## HITS:1 COG:no KEGG:PPA1678 NR:ns ## KEGG: PPA1678 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes # Pathway: not_defined # 1 180 2 181 181 332 98.0 4e-90 MKLACHPSTAVHPETTTDPATLRWVVSGITLPFAGLLVSAPGLDEFLNQVRVEATVGAVM ATVLEGTWERIGAGFRTALTTALERTDEWGGGPDSKPLNEVETLRRCADELIGGPVGAVA AMHGGSIELVDVSVGDEERRVDVTMRGACRGCPAAIMTLHQRLERQLSLRLREPVTVREI >gi|302034484|gb|GL383267.1| GENE 42 37279 - 39243 1747 654 aa, chain - ## HITS:1 COG:XF0933 KEGG:ns NR:ns ## COG: XF0933 COG0370 # Protein_GI_number: 15837535 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+ transport system protein B # Organism: Xylella fastidiosa 9a5c # 23 633 7 594 617 408 41.0 1e-113 MPIPTAAPCHTVPTTEPRTGSPKLALVGSPNGGKTSIFNQLTGLHAKTGNYPGVTVSRST GVCRIGKNEYGIEDLPGTYSLAPISPDEEVVVHALEGTMKGIPAPDGVLVVADSTALRRS LLLLAETLALGLPTAVIVTMTDELRRRGGSLDTTALSQALGVPVVSVVANRGIGIGELRH LIADWQTWDRPPVPPPTATEELAGWVDSVLTSAGYQDPHLDSRTERIDKVLLHPVWGTIV FFVVMFLFFQALFTWAAPAQDAIDNFFSWLGGWVDDNVSNQILAGLLGDGIIGGVGSVLT FVPQILLMYLLLALLDAVGYMSRAAFLMDKVMSRAGLEGRAFVAMLSSFACAIPGVMATR TIPSAKDRIATMLGVPLATCSARLPVYVLLVGMLIPNTTQIGPFSGRGVAMFLLYLLGAV SAMAAAWVVKKITDRSGILLPFYMEMPPYRIPTLRSVGIAMWEPTKAFLHKAGTIIMLTT IVIWALTTFPMRSNAELAKAGIDPSNDVAVAAYTMDHSIAGSIGKAVEPVFEPLGFDWRI DVSLIGSLAAREVSVSTLGQMASATDPEDDVDVSHQLDHWTWTHGPNKGNKVFTPATIVA LILFFAYALQCMSTVAIMKRETGGWKWPAVAFGYMFVLAWVMAFIGRLVTGLLM >gi|302034484|gb|GL383267.1| GENE 43 39304 - 39633 170 109 aa, chain - ## HITS:1 COG:no KEGG:PPA1676 NR:ns ## KEGG: PPA1676 # Name: not_defined # Def: ferrous iron transport protein A # Organism: P.acnes # Pathway: not_defined # 1 109 1 109 109 202 100.0 4e-51 MTRHMNRSTADSQGVVPLSSLAAGQNATIEDITIECADYVRRRLHMLGFGHGRAVTKIRQ APFGGPMVFHVCDVQMCLRRAQADMIMVRPAPQTAPQPVVESCATTALA >gi|302034484|gb|GL383267.1| GENE 44 39805 - 40659 522 284 aa, chain + ## HITS:1 COG:MT1379 KEGG:ns NR:ns ## COG: MT1379 COG0796 # Protein_GI_number: 15840793 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glutamate racemase # Organism: Mycobacterium tuberculosis CDC1551 # 11 270 6 266 271 271 54.0 1e-72 MTEPDFDVVDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRRY ALQCLDRLVAHGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIG VICTEATARSLSYEDALAAVPGITLTTQACPKFVPFVEEGITSGPELEAIAREYLAPIQE AGCDTLILGCTHYPLLAGLISYVLGDGVTLISSSHQCARASYSLMVESGLLHSHPRESSR YFLTTGNAERFEKLGRRLMEGFVHDVQSVHADAHSLGDRAVVRD >gi|302034484|gb|GL383267.1| GENE 45 40699 - 41457 699 252 aa, chain + ## HITS:1 COG:Cgl2451 KEGG:ns NR:ns ## COG: Cgl2451 COG0689 # Protein_GI_number: 19553701 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RNase PH # Organism: Corynebacterium glutamicum # 10 250 18 258 258 277 63.0 1e-74 MWATILGKVSETSRIDGRRLDQLRDVRIERGWLSQAEGSVLVSFGRTTVLCNASVTEGVP RWRKGSGLGWVTAEYEMLPRATNERSGRESRKGKVGGRTHEISRLVGRSLRAVVDDKALG ENTIILDCDVLQADGGTRTASITGAYVALIDAVNWLRGRGGLVSEPIIGSVQAISVGVVD GIPMLDLAYEEDSRADTDMNVVMSGNGDFVEIQGTAEGTPFNRNLLNELLDLAAGGCATL KQAQSEALGVTL >gi|302034484|gb|GL383267.1| GENE 46 41454 - 42068 395 204 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|74313511|ref|YP_311930.1| putative deoxyribonucleotide triphosphate pyrophosphatase [Shigella sonnei Ss046] # 1 197 1 194 197 156 45 2e-37 MSRIVLASNNAKKLVELRRTFEGADTEVEIVGLSEVSDAPAPEETGRTFVENALIKARAA AHETGLPALADDSGLEVDALNRMPGIRSARWSGPHAHDERNLQLLLDQTFDLPDERRHGR FVCAMAFVDPDGTEITKVATMEGRIISEARGKNGFGYDPMFVPDAQPGDLTSAEMTPEVK DAISHRGQAVRAIVPAVVAHLEGR >gi|302034484|gb|GL383267.1| GENE 47 42069 - 42878 687 269 aa, chain + ## HITS:1 COG:NMA1963 KEGG:ns NR:ns ## COG: NMA1963 COG0207 # Protein_GI_number: 15794846 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate synthase # Organism: Neisseria meningitidis Z2491 # 1 269 1 264 264 360 62.0 2e-99 MQIYLDLLRRILDEGVRREDRTGTGTVSVFGHQMVFDLREGFPLVTTKKIYTRSVFGELL WFLRGDTNVGWLYDNNIHIWDEWADENGDLGPVYGHQWRSWPDDDGTIDQIANVVEQIRT NPWSRRHIVSAWNVAEIKEMALPPCHTLFQFYVTPDDRGTPTWLSCQLYQRSGDTFLGVP FNIASYALLTHLVASVTGLKPLRFVHTLGDAHVYLNHLDQVHEQLKRKPRHRPTLTVNPG IRDIDGFELSDITLTGYDPYPALPAPIAV >gi|302034484|gb|GL383267.1| GENE 48 42838 - 43392 475 184 aa, chain + ## HITS:1 COG:AGc3708 KEGG:ns NR:ns ## COG: AGc3708 COG0262 # Protein_GI_number: 15889333 # Func_class: H Coenzyme transport and metabolism # Function: Dihydrofolate reductase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 30 184 5 172 175 124 42.0 9e-29 MTRIRRCLLRLRSDRVPGSSFHQAAGGLMKVVAIAAVADNGVIGSGQDMLWHISEDFRRF KTVTMGHTLIFGRRTFEQIGKLPGRRHIICTRDPHWSHEGVDVATSPRQAVEMAREAGEE ICFVAGGGQIYADAFELCDELDITEVHQNPNGAARFPAIDPEVWVEVRRESRDGFDFVGY RRRS >gi|302034484|gb|GL383267.1| GENE 49 43422 - 44786 845 454 aa, chain + ## HITS:1 COG:Cgl2094 KEGG:ns NR:ns ## COG: Cgl2094 COG0389 # Protein_GI_number: 19553344 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Corynebacterium glutamicum # 1 440 10 448 467 228 40.0 3e-59 MDAFFASVEQRDKPSLVGKAVIVGGVGGRGVVATASYEARKIGVHSAMAGSQARRLAPNA AFLSGRFEAYRESSKVVMATLRELSPLVEPLSLDEAFVDLEAGDVDVENLDALQQVAVEL RARVAERTEGLSCSVGIGSSKFMAKVASEMAKPQRGHTDQIALIAPGTEADTIAPLSARA IPGVGPVTAERLEKLGLRTIADVRAARESELVHELGHASGVSLVALSRARDDRPVVASRI AKSISVEDTFEHDLTHREECRQIVERHAGLVCGRLKKSGQFARTVTLKAKMADFTVWSRS VTLTGATDSPERISQLAVRMLDSLDLREGVRLLGVGVSNFATSAQEELFVVDDEGRLLDE PEVTEEITPIQPGPFGRRRSFDGRNWPPGVDLIHDEYGRGWVWGSGHGIVTCRFEYRGSE IGRVKSVPQDDEALHPAHPLPLAWQPPQEDVPSE >gi|302034484|gb|GL383267.1| GENE 50 44838 - 46526 1488 562 aa, chain - ## HITS:1 COG:PM1361 KEGG:ns NR:ns ## COG: PM1361 COG1073 # Protein_GI_number: 15603226 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Pasteurella multocida # 4 556 73 593 599 92 24.0 3e-18 MTPGFQRTKETQISYSLELARRGYVTLVVDPYNQGESTSQPPHSDDPSIQPAIDYVSRTN ALNYVDKTKIGITGHSAGGSQVRHIAAEYGTKEAKALKKAKAPDSPGGTTVTKEEREKAE QLNPIRSVFISGWLQQLNAKKLKNIRSNIGIGYALYDEGGYRNKTHNGDLRHAPEAIAVI NSGLPKSQHVNHVVVGKGYGSAADRTYRVAYNDRTIHPFQPLTPSAIGSMIQFFDDTIGA PHQMSTSNQTWWLKELFNGLSLVAALVMLVPLTKLLLTIPWFAAARTDISPAPPKPKGKS AVIFWTIFVISAAVACVTFIPLSVASQHIFSAAANKQNGWFFPGRMVNGVVLWSLVNGLF GLVLLWISHAISKKHGDDEAKDWGVRMNWVQTGRTLALALLVIVIFYTILAAIYGFFHVD YRLFVVAARPLTKRWFLIALAYVPALFLFFLSNSLRVNTSMRFNNQRRWVNWLIIALANS IGLAAIFVIQYVTLFSTGTVFWTTTWLYVNMLQSLLPMMVVLPLFNRAFYHVTGRVWLGP IVTTTIFALMALGGSVAYIPMF >gi|302034484|gb|GL383267.1| GENE 51 46523 - 46750 183 75 aa, chain - ## HITS:1 COG:no KEGG:PPA1669 NR:ns ## KEGG: PPA1669 # Name: not_defined # Def: membrane-spanning protein # Organism: P.acnes # Pathway: not_defined # 1 62 1 62 637 117 95.0 2e-25 MHSATGLRRSRPVIHVLICLLLILAGAVGASLIQTGGGHIAVQGLKIPGKDGAVASADSS DPTRQQQRTKPLSSS >gi|302034484|gb|GL383267.1| GENE 52 47123 - 47911 336 262 aa, chain + ## HITS:1 COG:mlr3078 KEGG:ns NR:ns ## COG: mlr3078 COG1737 # Protein_GI_number: 13472701 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Mesorhizobium loti # 30 261 24 254 275 78 26.0 1e-14 MAESKGSAPGSLYTRLGELQAMTPTDAIIAQYCEDSFPHVALENLDEISAATGTSTASVT RFVRKLGYASFRDFSRSLREEVAANFDLPSDRTTNDPMTDEPGAMWRSKMEAARRSIDIG LNSLDGETFDRVVELLRDDSRPLCLVAAATGHALLDYFRLLVRYYRRDVILLDSTDRMAH QLIDLPDNAILLASVFDRHSRMVESVLRLFHQRNMTTVLLTNRSSTPMRRYADHVLLVSS ESSTAFRSRACYLILLESLVAL >gi|302034484|gb|GL383267.1| GENE 53 48011 - 48445 78 144 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313763375|gb|EFS34739.1| ## NR: gi|313763375|gb|EFS34739.1| conserved domain protein [Propionibacterium acnes HL013PA1] conserved domain protein [Propionibacterium acnes HL050PA3] conserved domain protein [Propionibacterium acnes HL037PA1] conserved domain protein [Propionibacterium acnes HL059PA2] conserved domain protein [Propionibacterium acnes HL050PA2] conserved domain protein [Propionibacterium acnes HL087PA1] # 22 144 1 123 123 234 100.0 2e-60 MWPNIPIAGRRFGPALSTVARMRGMAFLLGEAVAGALEVDCQAGEPHAEGGGSVVNSLAD VVIDTVSVVLAWPVIWAPVPAGIMPDGTLDSRLGSLDVEPALNRRSFRPDLVHLLCDVAA MGDLVVEGSERHCLSPFIADHLCQ